cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12171270
title: Phylogeography of the banded butterflyfish, Chaetodon striatus, indicates high connectivity between biogeographic provinces and ecosystems in the western Atlantic

description: ABSTRACT Among the four butterflyfishes of the genus Chaetodon present in the western Atlantic, the banded butterflyfish Chaetodon striatus has the largest distribution range, spanning 44 degrees of latitude (from Massachusetts, USA to Santa Catarina, Brazil). Although the ecology of the banded butterflyfish has been well studied over its entire range, nothing is known about its phylogeography and how biogeographic barriers structure its populations. To assess the level of genetic connectivity among populations from distinct biogeographic provinces and environmental conditions, we collected samples from seven localities: Puerto Rico, in the Caribbean, and Tamandaré, Salvador, Abrolhos, Trindade Island, Arraial do Cabo and Florianópolis, in Brazil. One nuclear (rag 2) and two mitochondrial (control region and cyt b) molecular markers were sequenced. Our findings are consistent with a recent population expansion, around 30-120 thousand years ago, which was found for all populations. Haplotype network analyses point to the Caribbean as a refugium before the population expansion. Results show no geographic pattern of genetic diversity. Indeed, a lack of population structure was found and no isolation was observed across oceanographic barriers, as well as between coral and rocky reef ecosystems. Furthermore, no directionality in the migration pattern was found among populations. Since ecological and environmental characteristics are very diverse across such a vast geographic range, the lack of genetic differentiation suggests that C. striatus evolved ecological plasticity rather than local adaptation in the western Atlantic.
DOI: 10.6084/m9.figshare.12171270.v1
title: Phylogeography of the banded butterflyfish, Chaetodon striatus, indicates high connectivity between biogeographic provinces and ecosystems in the western Atlantic

description: ABSTRACT Among the four butterflyfishes of the genus Chaetodon present in the western Atlantic, the banded butterflyfish Chaetodon striatus has the largest distribution range, spanning 44 degrees of latitude (from Massachusetts, USA to Santa Catarina, Brazil). Although the ecology of the banded butterflyfish has been well studied over its entire range, nothing is known about its phylogeography and how biogeographic barriers structure its populations. To assess the level of genetic connectivity among populations from distinct biogeographic provinces and environmental conditions, we collected samples from seven localities: Puerto Rico, in the Caribbean, and Tamandaré, Salvador, Abrolhos, Trindade Island, Arraial do Cabo and Florianópolis, in Brazil. One nuclear (rag 2) and two mitochondrial (control region and cyt b) molecular markers were sequenced. Our findings are consistent with a recent population expansion, around 30-120 thousand years ago, which was found for all populations. Haplotype network analyses point to the Caribbean as a refugium before the population expansion. Results show no geographic pattern of genetic diversity. Indeed, a lack of population structure was found and no isolation was observed across oceanographic barriers, as well as between coral and rocky reef ecosystems. Furthermore, no directionality in the migration pattern was found among populations. Since ecological and environmental characteristics are very diverse across such a vast geographic range, the lack of genetic differentiation suggests that C. striatus evolved ecological plasticity rather than local adaptation in the western Atlantic.
DOI: 10.6084/m9.figshare.12171291
title: Comparative analysis of the diet composition and its relation to morphological characteristics in Achirus mazatlanus and Syacium ovale (Pleuronectiformes: Osteichthyes) from a Mexican Pacific coastal lagoon

description: ABSTRACT The purpose of this research was to investigate differences in diet composition between Achirus mazatlanus and Syacium ovale, two flatfishes inhabiting in a tropical coastal lagoon and to investigate the relationship of their feeding habits to size, body morphometry and mouths characteristics. Fish were collected during sampling trips conducted regularly from 2011 to 2016 using several types of fishing gear. Total number of analyzed stomachs with some food content was 328 for Achirus mazatlanus from 1.4 to 21.3 cm total length (TL) and 203 for Syacium ovale with 1.3 to 24.0 cm TL. Results indicate that both species share a general diet based on benthic invertebrates and fishes but S. ovale has a more piscivorous habit, which can be explained by a more slender body shape and larger teeth, characteristics which increase prey fish catching performance. Important changes in composition of food categories related to size were not found for any species, but larger fish of both species eat larger ranges of prey sizes, and this ontogenetic change is consistent with recent developments on optimal foraging theory.
DOI: 10.6084/m9.figshare.12171291.v1
title: Comparative analysis of the diet composition and its relation to morphological characteristics in Achirus mazatlanus and Syacium ovale (Pleuronectiformes: Osteichthyes) from a Mexican Pacific coastal lagoon

description: ABSTRACT The purpose of this research was to investigate differences in diet composition between Achirus mazatlanus and Syacium ovale, two flatfishes inhabiting in a tropical coastal lagoon and to investigate the relationship of their feeding habits to size, body morphometry and mouths characteristics. Fish were collected during sampling trips conducted regularly from 2011 to 2016 using several types of fishing gear. Total number of analyzed stomachs with some food content was 328 for Achirus mazatlanus from 1.4 to 21.3 cm total length (TL) and 203 for Syacium ovale with 1.3 to 24.0 cm TL. Results indicate that both species share a general diet based on benthic invertebrates and fishes but S. ovale has a more piscivorous habit, which can be explained by a more slender body shape and larger teeth, characteristics which increase prey fish catching performance. Important changes in composition of food categories related to size were not found for any species, but larger fish of both species eat larger ranges of prey sizes, and this ontogenetic change is consistent with recent developments on optimal foraging theory.
DOI: 10.6084/m9.figshare.12171279
title: Redescription of Ancistrus greeni (Siluriformes: Loricariidae), and description of a new species from the río Madre de Dios basin, Peru

description: ABSTRACT A new species of Ancistrus is described from minor tributaries of the río Madre de Dios basin (Cusco - Madre de Dios - Puno), in Peru. The new species shares with A. greeni an uncommon unicusp dentition; but it is distinguished from A. greeni by a larger orbital diameter, deeper caudal peduncle, and larger adipose-fin spine. The redescription of A. greeni is provided, and its recognition along with the discovery of this new species increases to five the officially number of Ancistrus species from the río Madre de Dios basin. The lectotype and paralectotype of A. greeni are provided.
DOI: 10.6084/m9.figshare.12171279.v1
title: Redescription of Ancistrus greeni (Siluriformes: Loricariidae), and description of a new species from the río Madre de Dios basin, Peru

description: ABSTRACT A new species of Ancistrus is described from minor tributaries of the río Madre de Dios basin (Cusco - Madre de Dios - Puno), in Peru. The new species shares with A. greeni an uncommon unicusp dentition; but it is distinguished from A. greeni by a larger orbital diameter, deeper caudal peduncle, and larger adipose-fin spine. The redescription of A. greeni is provided, and its recognition along with the discovery of this new species increases to five the officially number of Ancistrus species from the río Madre de Dios basin. The lectotype and paralectotype of A. greeni are provided.
DOI: 10.6084/m9.figshare.12171306
title: A Century after! Rediscovery of the ancient catfish Diplomystes Bleeker 1858 (Siluriformes: Diplomystidae) in coastal river basins of Chile and its implications for conservation

description: ABSTRACT The ancient catfish family Diplomystidae, with seven species endemic to rivers of southern South America, represents one of the oldest branches of the diverse order Siluriformes. With most species endangered, new reports of these species become extremely valuable for conservation. Currently, it is assumed that Diplomystes species inhabit only Andean (large) basins, and that they are extinct from coastal (small) basins from which their presence have not been recorded since 1919. Here, we document new records of the family Diplomystidae in the Laraquete and Carampangue basins, two coastal basins from the Nahuelbuta Coast Range, Chile, with no previous reports. This finding represents the rediscovery of the genus in coastal basins in more than a Century. Based on analysis of mitochondrial DNA sequences, the collected specimens were found to be closely related to Diplomystes nahuelbutaensis from the Andean Biobío Basin, but sufficiently differentiated to suggest that coastal basin populations are a different management unit. These populations are important because, contrary to previous thoughts, they prove these catfish can survive in small river networks, providing unique opportunities for research and conservation. The conservation category of Critically Endangered (CE) is recommended for the populations from the Laraquete and Carampangue basins.
DOI: 10.6084/m9.figshare.12171306.v1
title: A Century after! Rediscovery of the ancient catfish Diplomystes Bleeker 1858 (Siluriformes: Diplomystidae) in coastal river basins of Chile and its implications for conservation

description: ABSTRACT The ancient catfish family Diplomystidae, with seven species endemic to rivers of southern South America, represents one of the oldest branches of the diverse order Siluriformes. With most species endangered, new reports of these species become extremely valuable for conservation. Currently, it is assumed that Diplomystes species inhabit only Andean (large) basins, and that they are extinct from coastal (small) basins from which their presence have not been recorded since 1919. Here, we document new records of the family Diplomystidae in the Laraquete and Carampangue basins, two coastal basins from the Nahuelbuta Coast Range, Chile, with no previous reports. This finding represents the rediscovery of the genus in coastal basins in more than a Century. Based on analysis of mitochondrial DNA sequences, the collected specimens were found to be closely related to Diplomystes nahuelbutaensis from the Andean Biobío Basin, but sufficiently differentiated to suggest that coastal basin populations are a different management unit. These populations are important because, contrary to previous thoughts, they prove these catfish can survive in small river networks, providing unique opportunities for research and conservation. The conservation category of Critically Endangered (CE) is recommended for the populations from the Laraquete and Carampangue basins.
DOI: 10.6084/m9.figshare.12171018
title: Microsatellite loci development for three catfish species from northwestern South America

description: ABSTRACT The Neotropical catfish species Ageneiosus pardalis, Pimelodus grosskopfii, and Sorubim cuspicaudus are important fishery resources in Colombia that show historical declines in their capture. This study used next-generation sequencing with 454 FLX technology (Roche Applied Science) and bioinformatics analysis to develop between 18 and 24 microsatellite loci for these species. The novel microsatellite loci showed high values of polymorphic information content -PIC (A. pardalis: 0.601-0.903, P. grosskopfii: 0.748-0.946 and S. cuspicaudus: 0.383-0.876), and the average number of alleles/locus ranged from 7-15 for A. pardalis, 9-30 for P. grosskopfii and 5-14 for S. cuspicaudus. The average observed and expected heterozygosities were respectively, 0.757 ± 0.035 and 0.834 ± 0.015 for A. pardalis; 0.596 ± 0.040 and 0.881 ± 0.009 for P. grosskopfii; and 0.747 ± 0.031 and 0.757 ± 0.025 for S. cuspicaudus. For future studies, these loci can be useful to estimate the genetic diversity and population structure in these three Neotropical catfishes.
DOI: 10.6084/m9.figshare.12171018.v1
title: Microsatellite loci development for three catfish species from northwestern South America

description: ABSTRACT The Neotropical catfish species Ageneiosus pardalis, Pimelodus grosskopfii, and Sorubim cuspicaudus are important fishery resources in Colombia that show historical declines in their capture. This study used next-generation sequencing with 454 FLX technology (Roche Applied Science) and bioinformatics analysis to develop between 18 and 24 microsatellite loci for these species. The novel microsatellite loci showed high values of polymorphic information content -PIC (A. pardalis: 0.601-0.903, P. grosskopfii: 0.748-0.946 and S. cuspicaudus: 0.383-0.876), and the average number of alleles/locus ranged from 7-15 for A. pardalis, 9-30 for P. grosskopfii and 5-14 for S. cuspicaudus. The average observed and expected heterozygosities were respectively, 0.757 ± 0.035 and 0.834 ± 0.015 for A. pardalis; 0.596 ± 0.040 and 0.881 ± 0.009 for P. grosskopfii; and 0.747 ± 0.031 and 0.757 ± 0.025 for S. cuspicaudus. For future studies, these loci can be useful to estimate the genetic diversity and population structure in these three Neotropical catfishes.
DOI: 10.6084/m9.figshare.12824186
title: Purcell_RawEyeTrackingData

description: Data
DOI: 10.6084/m9.figshare.12824186.v1
title: Purcell_RawEyeTrackingData

description: Data
DOI: 10.6084/m9.figshare.12171030
title: Morphological and immunohistochemical comparison of the pituitary gland between a tropical Paracheirodon axelrodi and a subtropical Aphyocharax anisitsi characids (Characiformes: Characidae)

description: ABSTRACT Cardinal tetra Paracheirodon axelrodi and bloodfin tetra Aphyocharax anisitsi are two species of characids with high trade value as ornamental fish in South America. Although both species inhabit middle water layers, cardinal neon exhibits a tropical distribution and bloodfin tetra a subtropical one. Generally, these species are difficult to grow, so it becomes essential to know some key components of the neuroendocrine system to achieve their reproduction in captivity. Considering the importance of deepening the knowledge of the reproductive physiology through functional morphology, for the first time in this work we performed an anatomical, morphological and immunohistochemical analysis of the pituitary gland of these two species. In both species, a leptobasic type pituitary is found in the ventral zone of the hypothalamus and it is characterized by a neurohypophysis which has a well-developed pituitary stalk and a globular adenohypophysis. The pituitary components, characterized by histochemistry and immunohistochemistry, shows a distribution pattern of cells types similar to other teleost species, with only slight differences in the distribution of βFSH and βLH for P. axelrodi.
DOI: 10.6084/m9.figshare.12171030.v1
title: Morphological and immunohistochemical comparison of the pituitary gland between a tropical Paracheirodon axelrodi and a subtropical Aphyocharax anisitsi characids (Characiformes: Characidae)

description: ABSTRACT Cardinal tetra Paracheirodon axelrodi and bloodfin tetra Aphyocharax anisitsi are two species of characids with high trade value as ornamental fish in South America. Although both species inhabit middle water layers, cardinal neon exhibits a tropical distribution and bloodfin tetra a subtropical one. Generally, these species are difficult to grow, so it becomes essential to know some key components of the neuroendocrine system to achieve their reproduction in captivity. Considering the importance of deepening the knowledge of the reproductive physiology through functional morphology, for the first time in this work we performed an anatomical, morphological and immunohistochemical analysis of the pituitary gland of these two species. In both species, a leptobasic type pituitary is found in the ventral zone of the hypothalamus and it is characterized by a neurohypophysis which has a well-developed pituitary stalk and a globular adenohypophysis. The pituitary components, characterized by histochemistry and immunohistochemistry, shows a distribution pattern of cells types similar to other teleost species, with only slight differences in the distribution of βFSH and βLH for P. axelrodi.
DOI: 10.6084/m9.figshare.14322546.v1
title: Trophic strategies of the invasive Twospot livebearer (Pseudoxiphophorus bimaculatus, Teleostei: Poeciliidae) in a gradient of environmental quality in central Mexico

description: ABSTRACT Pseudoxiphophorus bimaculatus is an invasive species widely spread throughout freshwater ecosystems in central Mexico, for that reason we described its trophic strategy into a gradient of environmental quality. We sampled individuals of P. bimaculatus at eight sites located in the Lerma-Chapala and Pánuco River Basins during dry season. These basins have been impacted by industrialization and urbanization processes, but are considered as water reserves in México. To evaluate the environmental quality of the river, we applied the Visual-based Habitat Assessment, the Index of Biological Integrity and the Family-level Biotic Index. We assessed the trophic guild, the diet width, the omnivory level, and the diet selectivity. We also explored the relation of trophic strategies with the habitat condition. We captured a total of 202 individuals of P. bimaculatus from 10 to 67 mm of SL, finding a total of 24 food items. The diet of P. bimaculatus was composed of terrestrial, aquatic insects and bony fish. Pseudoxiphophorus bimaculatus in some sites can feed on different trophic levels, in other it is a specialist and secondary consumer. We found that P. bimaculatus changes its diet according the alterations in the habitat structure, water quality, and biotic integrity. Moreover, this invasive species can endure changes in the trophic web and food availability.
DOI: 10.6084/m9.figshare.14322546
title: Trophic strategies of the invasive Twospot livebearer (Pseudoxiphophorus bimaculatus, Teleostei: Poeciliidae) in a gradient of environmental quality in central Mexico

description: ABSTRACT Pseudoxiphophorus bimaculatus is an invasive species widely spread throughout freshwater ecosystems in central Mexico, for that reason we described its trophic strategy into a gradient of environmental quality. We sampled individuals of P. bimaculatus at eight sites located in the Lerma-Chapala and Pánuco River Basins during dry season. These basins have been impacted by industrialization and urbanization processes, but are considered as water reserves in México. To evaluate the environmental quality of the river, we applied the Visual-based Habitat Assessment, the Index of Biological Integrity and the Family-level Biotic Index. We assessed the trophic guild, the diet width, the omnivory level, and the diet selectivity. We also explored the relation of trophic strategies with the habitat condition. We captured a total of 202 individuals of P. bimaculatus from 10 to 67 mm of SL, finding a total of 24 food items. The diet of P. bimaculatus was composed of terrestrial, aquatic insects and bony fish. Pseudoxiphophorus bimaculatus in some sites can feed on different trophic levels, in other it is a specialist and secondary consumer. We found that P. bimaculatus changes its diet according the alterations in the habitat structure, water quality, and biotic integrity. Moreover, this invasive species can endure changes in the trophic web and food availability.
DOI: 10.6084/m9.figshare.14322579
title: High levels of docosahexaenoic acid are present in eight New World silversides (Pisces: Atherinopsidae)

description: ABSTRACT Docosahexaenoic acid (DHA) is the most critical and least available omega-3 fatty acid in the Western human diet. Currently, the source of omega-3 long chain polyunsaturated fatty acids (LC-PUFA) is mainly dependent on wild fisheries, making this resource unsustainable in the foreseeable future. In recent years, a high rate of biosynthesis and accumulation of DHA has been discovered in a freshwater species (Chirostoma estor) belonging to the Atherinopsidae family. Interest in evaluating fatty acid composition in other members of the family has emerged, so this study compiles original data of flesh composition of eight atherinopsid species from freshwater and brackish environments, either wild or cultured. High levels of DHA (16 to 31%) were found in all analyzed members of the family, except in C. grandocule, independently of their habitat or origin. The analyzed species of the Jordani group (C. estor, C. promelas and C. humboldtianum) showed high DHA and low EPA levels (&lt;0.5%) as previously reported for cultured C. estor. The low trophic niche of these atherinopsids and their fatty acid accumulation capabilities are factors that make these species noteworthy candidates for sustainable aquaculture.
DOI: 10.6084/m9.figshare.14322579.v1
title: High levels of docosahexaenoic acid are present in eight New World silversides (Pisces: Atherinopsidae)

description: ABSTRACT Docosahexaenoic acid (DHA) is the most critical and least available omega-3 fatty acid in the Western human diet. Currently, the source of omega-3 long chain polyunsaturated fatty acids (LC-PUFA) is mainly dependent on wild fisheries, making this resource unsustainable in the foreseeable future. In recent years, a high rate of biosynthesis and accumulation of DHA has been discovered in a freshwater species (Chirostoma estor) belonging to the Atherinopsidae family. Interest in evaluating fatty acid composition in other members of the family has emerged, so this study compiles original data of flesh composition of eight atherinopsid species from freshwater and brackish environments, either wild or cultured. High levels of DHA (16 to 31%) were found in all analyzed members of the family, except in C. grandocule, independently of their habitat or origin. The analyzed species of the Jordani group (C. estor, C. promelas and C. humboldtianum) showed high DHA and low EPA levels (&lt;0.5%) as previously reported for cultured C. estor. The low trophic niche of these atherinopsids and their fatty acid accumulation capabilities are factors that make these species noteworthy candidates for sustainable aquaculture.