cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5263555
title: Structural insights into Rab21 GTPase activation mechanism by molecular dynamics simulations

description: Rab proteins belong to the family of monomeric GTPases which are involved in the cellular membrane trafficking. Rab21 protein exists in interchangeable GTP- and GDP-bound states. Rabs switch between two active and inactive conformations like other GTPases. The inactive form of Rab is bound to GDP while its active form is bounded with the GTP. Interexchange between active and inactive form is mediated by the GDP/GTP exchange factor (GEF) which catalyses the conversion from GDP-bound to GTP-bound form, thereby activating the Rab. While the GTP hydrolysis of Rabs is regulated by a GTPase-activating protein (GAP) which causes Rab inactivation. Here, we report the structural flexibility of the Rab21-GTP and Rab21-GDP complexes by docking and molecular dynamics (MD) simulations. Structural analysis of exchange mechanisms of the co-factors complexed with Rab21 reveals that Cys29, Thr33, His48, Gln78 and Lys133 are essentially important in the activation of proteins. Furthermore, a significant change in the orientation of the interacting co-factors, with slight variation in the free energy of binding was observed. Complexation of GEF with Rab21-GTP and Rab21-GDP reveal a flipping of the switchable residues. Finally, 50 ns MD simulations confirm that the GTP-bound Rab21 complex is thermodynamically more favoured than the corresponding GDP-bound complex. This study provides a detailed understanding of the structural elements involved in the conformational changes of Rab21.
DOI: 10.3535/kf0-dma-7ek
title: Ptyctodontida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mar-ytb-k7l
title: Ptyctodontida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23982402.v1
title: Texas Urban Lizard Morphology

description: Morphological data from 17 linear body measurements from two species of lizard in four regions of Texas. Accompanying data include the degree of urbanization around each lizard at various spatial scales.
DOI: 10.3535/afs-wm0-lxg
title: Ptyctodontida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p9y-b6j-4xt
title: Ptyctodontida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fzs-16e-4w0
title: Ptyctodontida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/le1-rt4-q58
title: Ptyctodontida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13173769.v1
title: Additional file 2 of Improved cytokine–receptor interaction prediction by exploiting the negative sample space

description: Additional file 2. 10 times 10-fold CV test/train sets in ARFF format (zip file).
DOI: 10.6084/m9.figshare.19697335.v3
title: <b>Callose Deposition Regulates Differences in Cotton Aphid Resistance among Six Watermelon Varietie</b>

description: We assessed the resistance of six watermelon varieties based on the performance of cotton aphids and elucidated the underlying phloem-based defensive mechanisms behind the resistance/susceptibility of watermelon plants against cotton aphids.
DOI: 10.3535/0km-s0h-wea
title: Ptyctodontida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sh9-jxg-an6
title: Ptyctodontida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5281/zenodo.15117897
title: (Dis)continuous buckling transition in elastic shell mediated by contact

description: Experimental data for figures in the paper (arXiv:2503.20670)
DOI: 10.6084/m9.figshare.19249589.v1
title: Enamine SMILES

description: SMILES of Enamine and the GTM mapping.
DOI: 10.6084/m9.figshare.4747912.v1
title: Computational study of one-step polar Diels–Alder reactions using the NEB method for the minimum energy paths search

description: The Nudged Elastic Band (NEB) method is an algorithm to search the minimum energy path (MEP), which has been successfully applied for studying several processes that involve solid-state models; however, it has not been widely tested in discrete molecular systems. Performing density functional theory calculations, this method was employed in NWChem to find the MEP of reactions between cyclopentadiene and cyano-substituted ethylenes. Results suggest that the reaction mechanism is concerted in all systems. Also, kinetics and thermodynamics analysis were done: With respect to experimental data, energetic parameters are computed better at the M06-2X/6-31++G** level; entropy and frequency factors were poorly predicted. This is a simple methodology, where the NEB method is evaluated to find the MEP in some prototypical Diels–Alder reactions.
DOI: 10.15468/dl.b4zt4p
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capparis corymbosa Lam.",
 "Continent is Africa"
 ]
}

 The dataset includes 81 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009739-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25403/upresearchdata.27287460.v1
title: Data analysis for the development of an anti-corruption policy advocacy framework in Botswana

description: The qualitative datasets were employed to enhance the empirical analysis of a study entitled <em>"</em>Towards a policy advocacy framework for the co-production of anti-corruption reforms in Botswana". Data was gathered through semi-structured interviews with senior representatives from both state and non-state actors involved in combatting corruption, as well as through content analysis of relevant public documents. Discourse network analysis (DNA) was utilised to map the relational structures that contributed to the establishment of advocacy coalitions within the policy subsystem over a decade. Additionally, thematic analysis, facilitated by ATLAS.ti software, provided a framework for examining the critical factors that either support or hinder the implementation of anti-corruption efforts in Botswana.
The DNA identified four distinct advocacy coalitions: pro-DALA, anti-DALA, pro-disclosure, and anti-disclosure. These coalitions competed to influence the design of the Declaration of Assets and Liabilities Act before its enactment in 2019. Conversely, the thematic analysis highlighted three primary themes: interagency collaboration in anti-corruption efforts, the implementation of anti-corruption laws, and proposals to strengthen the anti-corruption policy and institutional framework.
DOI: 10.3535/05s-dmn-e45
title: Ptyctodontida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/49z-325-scj
title: †Tvaerenella expedita Sarv, 1959

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12745370.v1
title: Dataset S6

description: Raw velocity seismograms for SKS phases propagated through the simplified hexagonally anisotropic subduction zone model. Seismograms are in SAC format (see SAC manual; http://ds.iris.edu/files/sac-manual/). The TauP predicted SKS arrival time through IASP91 is stored for reference. SAC files are written individually for each station and component for a particular event. The filenames follow the format EVT.STN.X where 'EVT' is a unique numeric event ID (see Dataset S2), 'STN' is the station name (see Dataset S1), and 'X' is 'N', 'E', or 'Z' corresponding to the north, east, or vertical seismogram component.
DOI: 10.6084/m9.figshare.28205030.v1
title: BE grizzly interview and focus group guides

description: Grizzly BE interview and focus group guides.
DOI: 10.6084/m9.figshare.5549104.v1
title: TraRECo: Simulated reads and its reference transcriptome

description: Simulated reads and its reference transcriptomegenerated with Flux SimulatorUsed for evaluation of TraRECo, a de novo transcriptome assembler developed by S. Yoon
DOI: 10.3535/7z4-5qn-lx2
title: †Tvaerenella modesta Sarv, 1959

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y2t-03v-fmy
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8nm-1sq-s9s
title: †Uhakiella magnifica Sarv, 1959

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xgg-fmy-9x8
title: †Euprimites (Bichilina) prima (Sarv, 1959)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13263881.v9
title: How fast is Australia's broadband (vs Top Ten Trading Partners; Speedtest Global Index 2017-2023)?

description: This data collates an excerpt from Speedtest Global Index, over time (2018 - 2020), for Australia's Top Ten Trading Partners by imports and exports. Download speeds are in Mbps. Figures are rounded to nearest 5Mbps, except for % growth, and smallest observations.<br>Australia's Top 10 Trading Partners are sourced from:- Observatory of Economic Complexity (https://oec.world).<br>A version of this data (2018 - 19) was published in the Journal of Telecommunications and the Digital Economy (JTDE link below), Figure 3 (Ferrers 2020) in 2020, and presented at a Telsoc NBN Future Forum on Learning from International Experiences. Data from paper is at Figshare (link below).<br>File is provided in formats:- numbers with paper graph, and formulae- csv (for browsing)- png version of Figure 3 from JTDE paper.<br>This dataset is intended to be updated annually. Speedtest provides monthly updates.<br>NB: Switch to median speed per country from late 2021/2022.<br>Versions:v9 - Add data to 2023, India passes AU, add Top 10 AU Partners graph 2017 - 23.v8 - Add data to 2022, China passes US in speed. Add China/US graph at 2017-2022.v7 - NZ is twice as fast as AU. Pic and data excerpt.v6 - updated Dec 2020 figures. add graph 2018-2020.v5 - added link to Whirlpool, querying Australia's recent 40% jump in download vs ACCC Sept 2020 report - link belowv4 - simplified titlev3 - include graph image from JTDE paper (Figure 3) 2018 - 19.v2 - Amended title to include yearsv1 - Initial Load
DOI: 10.6084/m9.figshare.1526128.v1
title: Plant-animal interactions from Africa

description: This dataset contains more than 9000 interactions between frugivores/granivores and fruits in Africa (and surrounding islands) recorded from published literature.
DOI: 10.3535/5ln-7wy-eg6
title: †Euprimites (Bichilina) prima (Sarv, 1959)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xzh-s16-ber
title: †Uhakiella magnifica Sarv, 1959

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12932615.v1
title: S1TheNewYorkTimes.txt

description: For HUIWEN LI's dissertation.
DOI: 10.6084/m9.figshare.19234803.v1
title: Flowsets of the central sector of the last Cordilleran Ice Sheet

description: Flowset shapefiles from Reconstructing the advance and retreat dynamics of the central sector of the last Cordilleran Ice Sheet
DOI: 10.3535/3zz-03k-yw4
title: †Tvaerenella expedita Sarv, 1959

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/d57-rbf-74z
title: †Uhakiella magnifica Sarv, 1959

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tjr-taa-4f5
title: †Tvaerenella longa Sarv, 1959

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/twg-glw-w01
title: †Euprimites (Bichilina) prima (Sarv, 1959)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21206306.v1
title: Supplement, data and code: "Competition, benchmarking, and electoral success: Evidence from 69 years of the German Bundestag"

description: This fileset contains the supplement, the data and the replication code for the paper "Competition, benchmarking, and electoral success: Evidence from 69 years of the German Bundestag" <br> Abstract: The German electoral system ensures that there is always at least one federal legislator per constituency. This legislator can face competition from additionally elected competitors to the Bundestag from precisely the same constituency. The existence of several legislators per constituency allows voters to benchmark their quality against each other. We analyze the causal impact of having more elected competitors from the same constituency on legislators’ personal success versus the success of their parties. Our data cover the legislative terms in the German Bundestag and federal elections in the period 1953–2021. In our analysis, we rely on exogenous variation in elected competitors by investigating changes induced by legislators who leave the Bundestag during the legislative period and their respective replacement candidates as instrumental variables. We find that legislators are less successful in elections when they are exposed to elected competitors from the same constituency. The results suggest that benchmarking possibilities are relevant for voters to evaluate their representatives.
DOI: 10.6084/m9.figshare.27915417.v1
title: Additional file 1 of Identifying persistent high-cost patients in the hospital for care management: development and validation of prediction models

description: Additional file 1. a. Definitions and operationalization of predictors. b. Operationalization of final predictors through CCSR codes.
DOI: 10.35092/yhjc.12462332.v1
title: Two-photon Dataset from All Mice for Sit & Goard: Distributed and Retinotopically Asymmetric Processing of Coherent Motion in Mouse Visual Cortex

description: Accompanying dataset for Sit KK, Goard MJ. Distributed and Retinotopically Asymmetric Processing of Coherent Motion in Mouse Visual Cortex.<br><br>This dataset contains all the two-photon recordings in L2/3 V1 for all mice used.<br><br> See related data in collection here: https://doi.org/10.35092/yhjc.c.5018363<br><br> The purpose of these data is to understand the organization of neural activity in response to coherent motion in the murine visual cortex. <br>The manuscript associated with these data is Sit KK, Goard MJ. Distributed and Retinotopically Asymmetric Processing of Coherent Motion in Mouse Visual Cortex. <br>ABSTRACT Perception of visual motion is important for a range of ethological behaviors in mammals. In primates, specific visual cortical regions are specialized for processing of coherent visual motion. However, whether mouse visual cortex has a similar organization remains unclear, despite powerful genetic tools available for measuring population neural activity. Here, we use widefield and 2-photon calcium imaging of transgenic mice to measure mesoscale and cellular responses to coherent motion. Imaging of primary visual cortex (V1) and higher visual areas (HVAs) during presentation of natural movies and random dot kinematograms (RDKs) reveals varied responsiveness to coherent motion, with stronger responses in dorsal stream areas compared to ventral stream areas. Moreover, there is considerable anisotropy within visual areas, such that neurons representing the lower visual field are more responsive to coherent motion. These results indicate that processing of visual motion in mouse cortex is distributed heterogeneously both across and within visual areas.
DOI: 10.3535/7a3-kbl-yr8
title: †Euprimites (Bichilina) prima (Sarv, 1959)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rj0-z7c-ja4
title: †Tvaerenella modesta Sarv, 1959

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/b56-yls-frw
title: Baltoplacognathus reclinatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ekn-79a-8l3
title: Baltoplacognathus reclinatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qhc-wcb-dte
title: Baltoplacognathus reclinatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tak-8xr-v26
title: Baltoplacognathus reclinatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13046291.v1
title: Multimodal imaging with NanoGd reveals spatiotemporal features of neuroinflammation after experimental stroke

description: Excel file for cell culture, MRI and two-photon microscopy quantitative analyses. These are the data used for the statistical analyses.
DOI: 10.6084/m9.figshare.21089560.v1
title: A Global Typical Meteorological Year Database on ERA5 Dataset

description: A global typical meteorological year (TMY) database covers 38,947 stations worldwide. Each typical meteorological year data file includes dry-bulb temperature (°C) and absolute humidity (g/kg air), dew point (°C), direct normal irradiance (W/m2), diffuse horizontal irradiance (W/m2), global horizontal irradiance (W/m2), pressure (Mbar), wind direction, wind speed (m/s), etc. at 1-hour intervals. The data is created with Chinese Standard Weather Database method to reflect the average level of historical weather based on the fifth-generation atmospheric reanalysis product released by the European Center (ERA5). The dataset is saved in a 55 GB database of compressed CSV files and uploaded to a website where users can obtain the required TMY data for certain cities according to the longitude and latitude information. This TMY-ERA5 dataset is fundamental and essential in building system designs of international construction projects, building performance simulation, etc. especially for some countries lacking ground meteorological stations or missing meteorological year data in the building profession. It can be used as references for other meteorological climate studies.
DOI: 10.6084/m9.figshare.5153968.v1
title: Data from: Pollination in the Chilean Mediterranean-Type Ecosystem: a review of current advances and pending tasks

description: Original dataset from: Medel et al. (2017) Pollination in the Chilean Mediterranean-Type Ecosystem: a review of current advances and pending tasks. Plant Biology. DOI 10.1111/plb.12644<br>
DOI: 10.3535/h3z-k28-rne
title: Baltoplacognathus reclinatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r8a-yxy-fcw
title: Baltoplacognathus reclinatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.957574.v1
title: Zarządzanie wartością i ryzykiem w organizacji non profit, instytucji finansowej oraz przedsiębiorstwie nie będącym ani non profit ani nie prowadzącym działalności finansowej.

description: W poniższej pracy przeanalizujemy różne scenariusze rozwoju bądź regresji opisywanych organizacji. Dzięki analizie scenariuszy możemy kreować wiele różnych, możliwych do wystąpienia w przyszłości zdarzeń gdzie określa się prawdopodobieństwo ich zajścia. Wykonanie takiej analizy ograniczenia niepewność związaną z planowanym przedsięwzięciem. Wysoka niepewność otoczenia stwarza konieczność opracowywania różnych scenariuszy. Wymaga to zastosowania odpowiednich narzędzi do przewidywania przyszłości i dostosowywania działań organizacj.
DOI: 10.3535/30e-l23-ceg
title: Baltoplacognathus reclinatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/bly-sf6-xfv
title: Baltoplacognathus reclinatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/0ts-f1h-dxf
title: Baltoplacognathus reclinatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tmb-fqw-wk0
title: Dapsilodus viruensis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/llj-2py-5ne
title: Eoplacognathus suecicus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t69-0mb-b0p
title: Eoplacognathus suecicus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20280357.v1
title: Data of CSPC

description: Data of CSPC
DOI: 10.6084/m9.figshare.22044404.v1
title: Inhibition and Cognitive Flexibility are Related to Prediction of One’s Own Future Preferences in Young British and Chinese Children

description: The R scripts contains codes of the GLMM analysis of British and Chinese children's performance on the future preference task, as well as the GLM analysis for children's performance on the executive function and theory of mind task (included in the Appendix). <br> The data files contain the full dataset of the future preference task (long stacked format), executive function and theory of mind tasks.
DOI: 10.3535/m02-h1h-hyr
title: Eoplacognathus suecicus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20006755.v1
title: Mapping of the evidence from systematic reviews of the Cochrane Collaboration for decision-making within physiotherapy

description: CONTEXT AND OBJECTIVEEvidence-based clinical practice emerged with the aim of guiding clinical issues in order to reduce the degree of uncertainty in decision-making. The Cochrane Collaboration has been developing systematic reviews on randomized controlled trials as high-quality intervention study subjects. Today, physiotherapy methods are widely required in treatments within many fields of healthcare. Therefore, it is extremely important to map out the situation regarding scientific evidence within physiotherapy. The aim of this study was to identify systematic reviews on physiotherapeutic interventions and investigate the scientific evidence and recommendations regarding whether further studies would be needed.TYPE OF STUDY AND SETTINGCross-sectional study conducted within the postgraduate program on Internal Medicine and Therapeutics and at the Brazilian Cochrane Center.METHODSSystematic reviews presenting physiotherapeutic interventions as the main investigation, in the Cochrane Reviews Group, edition 2/2009, were identified and classified.RESULTSOut of the 3,826 reviews, 207 (5.41%) that fulfilled the inclusion criteria were selected. Only 0.5% of the reviews concluded that the intervention presented a positive effect and that further studies were not recommended; 45.9% found that there seemed to be a positive effect but recommended further research; and 46.9% found that the evidence was insufficient for clinical practice and suggested that further research should be conducted.CONCLUSIONOnly one systematic review (“Pulmonary rehabilitation for chronic obstructive pulmonary disease”) indicated that the intervention tested could be used with certainty that it would be effective. Most of the systematic reviews recommended further studies with greater rigor of methodological quality.
DOI: 10.3535/h2x-ch0-lz1
title: Eoplacognathus suecicus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tvh-xbh-asn
title: Microzarkodina ozarkodella

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.