cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/ypshd-w6g19
title: Simkania negevensis

description: Intact cells purified from amoeba cultures
description: <strong>Tilt Series Date:</strong> 2011-08-04</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Simkania negevensis</p>
<strong>Strain:</strong> Z</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Matthias Horn</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Purified</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-08-04-43/rawdata/</p>2011_08_04_C40023.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-08-04-43/rawdata/2011_08_04_C40023.mrc"
        > <i class="download icon"></i> Download </a></p>

        2011_08_04_C40023_full.rec,  Reconstruction (Pixel Size 1.89 nm), 825.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-08-04-43/3dimage_31691/2011_08_04_C40023_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/55b54-bc712
title: pLE7_1mM_IPTG

description: These cells are highly overexpressing YFP-MreB from the pLE7 plasmid. These cells were a gift from Larry Rothfield.
description: <strong>Tilt Series Date:</strong> 2011-11-18</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> LB 37 Degrees</p>
<strong>Sample Preparation:</strong> Induced at an OD of .2 and grew for 2 hours (~OD of .8)</p>
  mst2011-11-18-12_slicer9739.jpg: Escherichia coli .  vesicle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2011-11-18-12/rawdata/</p>20111118_ple7_1mMiptg0020.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2011-11-18-12/rawdata/20111118_ple7_1mMiptg0020.mrc"
        > <i class="download icon"></i> Download </a></p>

        20111118_ple7_1mMiptg0020_full.rec,  Reconstruction (Pixel Size 1.9 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2011-11-18-12/3dimage_15785/20111118_ple7_1mMiptg0020_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.2t4kmq
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Placidochromis phenochilus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044940-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/7aa2y-ch414
title: Cryo-sectioned Jurkat

description: Jurkats HP frozen and cryo-sectioned by Mark Ladinsky.  Data collected UCLA Titan.
description: <strong>Tilt Series Date:</strong> 2011-10-31</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Jurkat Human T-cell</p>
<strong>Strain:</strong> Clone E6-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> FEI Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Cryo-sectioning by Mark Ladinsky.</p>
<strong>Sample Preparation:</strong> cryo-sectioned by Mark Ladinsky</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-10-31-1/3dimage_68520/</p>11oct31_cryosec-Tomo_4_ns_full.rec,  Reconstruction (Pixel Size 2.0 nm), 634.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-10-31-1/3dimage_68520/11oct31_cryosec-Tomo_4_ns_full.rec"
        > <i class="download icon"></i> Download </a></p>

        11oct31_cryosec-Tomo_4_ns.st,  Tilt Series (Pixel Size 0.5 nm), 964.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-10-31-1/rawdata/11oct31_cryosec-Tomo_4_ns.st"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/nr7sm-e0f72
title: B. subtilis 3267 Alp7A

description: ponA mutant, static Alp7A
description: <strong>Tilt Series Date:</strong> 2014-07-10</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> AD3267, ponA null, Alp7A-GFP</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Joe Pogliano</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-07-10-19/rawdata/</p>Bacillus_32670019.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-07-10-19/rawdata/Bacillus_32670019.mrc"
        > <i class="download icon"></i> Download </a></p>

        Bacillus_32670019.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-07-10-19/3dimage_49346/Bacillus_32670019.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/e98dv-r5356
title: AZ21

description: Caulobacter crescentus CB15N with inframe deletion of all three lytic transglycosylases
description: <strong>Tilt Series Date:</strong> 2013-09-17</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -12.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Martin Thanbichler</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in PYE</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-17-25/rawdata/</p>CaulobacterAZ21atlas2new0002.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-17-25/rawdata/CaulobacterAZ21atlas2new0002.mrc"
        > <i class="download icon"></i> Download </a></p>

        CaulobacterAZ21atlas2new0002_part121_2.rec,  Reconstruction (Pixel Size 0.96 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-17-25/3dimage_31268/CaulobacterAZ21atlas2new0002_part121_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/brzv7-r1c60
title: M259Q

description: E. coli mutant locked in the CheA activating state. Penicillin treated
description: <strong>Tilt Series Date:</strong> 2010-11-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-61.0°, 61.0°), step: °, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -25.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD, CTF corrected</p>
<strong>Collaborators and Roles:</strong> John Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB medium (30 degrees), lysed with penicillin 1 hour</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-11-23-8/rawdata/</p>10nov23c_M259Q_008.st,  Tilt Series (Pixel Size 0.0 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-11-23-8/rawdata/10nov23c_M259Q_008.st"
        > <i class="download icon"></i> Download </a></p>

        10nov23c_M259Q_008.rec,  Reconstruction (Pixel Size 0.0 nm), 2.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-11-23-8/3dimage_14995/10nov23c_M259Q_008.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zxz2g-qn603
title: NLeGFPBglI UV30min

description: Pseudo HIV, VSV-g, UV treat
description: <strong>Tilt Series Date:</strong> 2013-11-27</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> HIV and deltaNef</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> UV treated for 30 min</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2013-11-27-18/rawdata/</p>2013nov27_L002_4_uv2_30minpseudovlp210006.mrc,  Tilt Series (Pixel Size 0.5 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2013-11-27-18/rawdata/2013nov27_L002_4_uv2_30minpseudovlp210006.mrc"
        > <i class="download icon"></i> Download </a></p>

        2013nov27_L002_4_uv2_30minpseudovlp210006_part121_63.rec,  Reconstruction (Pixel Size 2.0 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2013-11-27-18/3dimage_35170/2013nov27_L002_4_uv2_30minpseudovlp210006_part121_63.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.n368hp
title: Occurrence Download

description: A dataset containing 296 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Grammatoptila striata",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 296 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044941-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/jqtd3-kgn30
title: MLV 17.5

description: glygogag mutant, 1st batch
description: <strong>Tilt Series Date:</strong> 2014-01-16</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> MLV</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 106.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Hung Fan</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-01-16-18/rawdata/</p>C183_2_MLV_175_ggmut0009.mrc,  Tilt Series (Pixel Size 4.9 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-01-16-18/rawdata/C183_2_MLV_175_ggmut0009.mrc"
        > <i class="download icon"></i> Download </a></p>

        C183_2_MLV_175_ggmut0009_full.rec,  Reconstruction (Pixel Size 19.6 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-01-16-18/3dimage_37813/C183_2_MLV_175_ggmut0009_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wk5yq-epq80
title: E.coli   "strain 2619" EEEE

description: E.coli   "strain 2619" EEEE tsr receptor methylation site mutant EEEE CheA off state (CCWA)
description: <strong>Tilt Series Date:</strong> 2012-04-02</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB medium at 30 degrees, 1 hour lysed with Penicillin</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-04-02-33/rawdata/</p>UU2619_marchb0008.mrc,  Tilt Series (Pixel Size 0.644 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-04-02-33/rawdata/UU2619_marchb0008.mrc"
        > <i class="download icon"></i> Download </a></p>

        UU2619_marchb0008_full.rec,  Reconstruction (Pixel Size 1.288 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-04-02-33/3dimage_18110/UU2619_marchb0008_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/9kwmt-84h32
title: Sulfolobus Solfactaricus P2

description: Looking for dividing cells
description: <strong>Tilt Series Date:</strong> 2014-03-13</p>
<strong>Data Taken By:</strong> Rasika Ramdasi</p>
<strong>Species / Specimen:</strong> Sulfolobus solfataricus </p>
<strong>Strain:</strong> P2</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSF tomo</p>
<strong>Sample Preparation:</strong> grown at home, synchronized using primary baby machine</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-03-13-6/rawdata/</p>stiv4hatlas10001.mrc,  Tilt Series (Pixel Size 0.63 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-03-13-6/rawdata/stiv4hatlas10001.mrc"
        > <i class="download icon"></i> Download </a></p>

        stiv4hatlas10001_part111_14.rec,  Reconstruction (Pixel Size 2.52 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/rra2014-03-13-6/3dimage_40117/stiv4hatlas10001_part111_14.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/91vbe-pqm34
title: R9deltaEnv MOLT

description: R9, Molt, fixed
description: <strong>Tilt Series Date:</strong> 2014-08-24</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> HIV and deltaNef</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -9.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> fixed w/ 1% formaldehyde</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-08-24-8/rawdata/</p>L030_1_R9DE_MOLT0008.mrc,  Tilt Series (Pixel Size 0.49 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-08-24-8/rawdata/L030_1_R9DE_MOLT0008.mrc"
        > <i class="download icon"></i> Download </a></p>

        L030_1_R9DE_MOLT0008_full.rec,  Reconstruction (Pixel Size 1.96 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2014-08-24-8/3dimage_45715/L030_1_R9DE_MOLT0008_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/3aty5-ym364
title: E.coli "strain11" A413T CheAoff

description: E.coli methylation site mutant locked in a CheA inactivating state
description: <strong>Tilt Series Date:</strong> 2011-08-18</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: °, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> mutant from John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> cells grown at 30C in TB to log phase, then treated with penicillin for one hour </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-08-18-36/rawdata/</p>Ecolistrain11_2_081811_0009.st,  Tilt Series (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-08-18-36/rawdata/Ecolistrain11_2_081811_0009.st"
        > <i class="download icon"></i> Download </a></p>

        Ecolistrain11_2_081811_0009.rec,  Reconstruction (Pixel Size 0.0 nm), 1.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-08-18-36/3dimage_15574/Ecolistrain11_2_081811_0009.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/b3edt-0dr98
title: Protochlamydia amoebophila

description: Intact cells purified from amoeba cultures
description: <strong>Tilt Series Date:</strong> 2011-08-04</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Protochlamydia amoebophila</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Matthias Horn</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Purified</p>
  mpa2011-08-04-14_slicer9804.jpg: Protochlamydia amoebophila .  extracellular unknown?
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-08-04-14/rawdata/</p>2011_08_04_C9_0002.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-08-04-14/rawdata/2011_08_04_C9_0002.mrc"
        > <i class="download icon"></i> Download </a></p>

        2011_08_04_C9_0002_part.rec,  Reconstruction (Pixel Size 1.89 nm), 1.0 GB  
        
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DOI: 10.34740/kaggle/dsv/12870096
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.22002/t9g5d-p8t49
title: M. xanthus (Dk1622)

description: Imaged for Lotte in search of T6SS. This is the WT strain that they work with.
description: <strong>Tilt Series Date:</strong> 2012-08-17</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 23000x. </p>
<strong>Microscope:</strong> UCLA Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lotte Soregard-Anderson</p>
  mst2012-08-17-26_slicer4411.jpg: Granules
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2012-08-17-26/rawdata/</p>081712_2_DK1622_8.mrc,  Tilt Series (Pixel Size 1.11 nm), 1.1 GB  
        
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        081712_2_DK1622_8_part129_1.rec,  Reconstruction (Pixel Size 2.22 nm), 1.0 GB  
        
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