cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5866926.v1
title: Data and Song Files for "Global song divergence in barn swallows (Hirundo rustica): exploring the roles of genetic, geographic, and climatic distance in sympatry and allopatry"

description: All song files and measurements associated with MR Wilkins, et al. (2018) "Global song divergence in barn swallows (Hirundo rustica): exploring the roles of genetic, geographic, and climatic distance in sympatry and allopatry." Biological Journal of the Linnean Society.<br>Song Recording Descriptions:We present 1700 recordings from 19 sites across 6 countries, encompassing 5 of 6 currently described barn swallow subspecies: rustica, erythrogaster, gutturalis, tytleri, and transitiva. We include the downsampled and filtered song files used for analysis in Avisoft. Some of these files have been edited slightly to erase loud sounds in the recordings which threw off measures of peak frequency (see methods). The original, unfiltered 48kHz recordings are also included in a separate ZIP archive.<br>Data File Descriptions:1) Raw Song Measures_Wilkins et al_BJLS_2018.csv: Song measurements for each song file. Blanks are due to absence of a particular note (e.g. P-note) or inability to measure for a particular song (e.g. due to overlap with another bird).<br><br>2) Individual Mean Song Measures_Wilkins et al_BJLS_2018.csv: Average song measures for each individual.<br>Abbreviations: W.L=Warble LengthR.L=Rattle LengthPF.W= Peak Frequency of the WarblePF.R= Peak Frequency of the RattlePF.CR= Peak Frequency of the Central RattleW.WE= Warble Weiner EntropyCR.FB= Central Rattle Frequency BandwidthR.Tempo= Rattle TempoZcount= count of omega syllablesZprop= proportion of omega syllables<br>See main text for description of how these were measured.<br><br><br>
DOI: 10.17632/63hb5twsxm
title: Data for: Assessing Knowledge of Sickle Cell Trait/Disease Inheritance in Metropolitan Detroit

description: Data showing the knowledge of respondents about sickle cell inheritance
DOI: 10.17632/cjb4vy4mzj
title: Smart irrigation control system data with soil moisture, flow meter and electrovalve relay

description: This data set contains measurements of soil moisture, a flow meter, and the relay status of an electrovalve deployed in a smart irrigation control system. The system has been working succesfully for over two months in a strawberry field in production in Paraguay, 2022. The details of the experiments have been sent as a possible publication to the Journal of Irrigation and Drainage Engineering, under the title Deployment of a smart irrigation control system with capacity-based moisture sensors on a field in production, by L. Orihuela, E. Pacheco, J. Bareiro, A. Tapia and J.M. Manzano.

Data collected from July 12 2022 until September 17 2022 is presented. Three data sets are provided, in a CSV format, namely D_moisture, D_valve and D_flowmeter. The three of them contain 2 columns each, and each row is a new measurement collected from the field. In the three of them, the second column, named 'time_stamp' refers to the time stamp of the measurement, in format 'DD-MMM-YYYY hh:mm:ss', expressed in UTC coordinates. The first column indicates the measurement itself, them being:

- In D_moisture: the measured soil moisture, measured as a percentage and collected as explained in the mentioned paper. The sampling time is about 20 minutes. It contains 4293 rows.
- In D_flowmeter: the cumulative sum of the water volume that has been applied to the field, as measured by the flow meter installed, measured in litres since July 1st 2022. The sampling time is about 5 minutes. It contains 17411 rows.
- In D_valve: the state commanded to the relay incharge of the electrovalve in the irrigation system. 1 implies 'open' and 0 implies 'close'. The sampling time is about 5 minutes. It contains 17427 rows.

The dataset is open to be used by any researcher, in studies related to machine learning, agricultural soil monitoring or estimation and irrigation control, among others. Citing the aforementioned work is appreciated.
DOI: 10.6084/m9.figshare.12416351.v1
title: 01_N1_T250.Rdata

description: example data set<br>
DOI: 10.6084/m9.figshare.8286251.v1
title: Metadata

description: Metadata table with tissue type, age, sex, and sample ID.
DOI: 10.17632/jmhgr53n6w
title: Supplementary Data - Impact of varying levels of pasture allowance on the nutritional quality and functionality of milk throughout lactation

description: This research investigates the impact of increasing pasture allowance on the composition, nutritional quality and techno-functional attributes of milk from seasonal calving systems. This is the supplementary data associated with the research paper "Impact of varying levels of pasture allowance on the nutritional quality and functionality of milk throughout lactation"
DOI: 10.6084/m9.figshare.19643361.v1
title: Building Function Classification in Nanjing, China Using Deep Learning

description: Data and Code for <em>Building Function Classification in Nanjing, China Using Deep Learning </em>
DOI: 10.6084/m9.figshare.25075991.v1
title: <b>Raw Datasets for </b><b>Spatially Explicit Model for Assessing the Impacts of Groundwater Protection Measures in the Vicinity of the Hranice Abyss</b>

description: The daset presents data from the paper, that presents a spatially explicit model for quantification of the impacts of groundwater protection measures in a specific karst territory. The impacts were studied with regards to Storm Water Retention improvement and Land Surface Temperature cooling. The method for the evaluation is a combination of assessment of vulnerable areas using multicriteria analysis, hydrological modelling and Random Forest prediction model that downscales temperature data on 1x1 m surface. The model uses remote sensing with high resolution, namely LiDAR (50pt/m) point clouds, modelling of retention characteristics, quantification of vegetation and LANDSAT 8 satellite images to determine surface temperature. Land-use / Land cover (LULC) serves as a predictor for the model. Evaluation of changes is based on developing three hypothetical scenarios assuming LULC change upon which the effect of the change is verified in three parameters: protection of ground waters and mineral waters, capacity of retaining stormwater, and capacity of mitigating heat waves. The main finding is that the measures that aim primarily at groundwater protection affect also other parameters – surface temperature and retention capacity, while improving each of these parameters. In case of the retention capacity, it is by up to 32 % and in case of temperature it is a maximum of 8 %. As per the surface temperature, a significant variability has been found depending on the presence of field crops, and the model explains it. The model allows for prioritization of changes on the level of spatial units – in our case microbasins, thus allowing also for more precise targeting of the measures.
DOI: 10.6084/m9.figshare.26144071.v1
title: Supplementary tables for 'Black carbon formation at cold seeps and its potential contribution to the marine black carbon budget'

description: The long-term carbon sequestration capacity of black carbon (BC) is among the factors controlling climate change dynamics. Culture experiments have revealed that anaerobic methanotrophic archaea possess the ability to produce BC, but the impact of microbially-derived BC on the marine BC cycle has not been thoroughly investigated. This study examined the geochemical properties of BC preserved in seep carbonates from the South China Sea and Gulf of Mexico. δ<sup>13</sup>C<sub>BC</sub> values as low as −45.2‰ in seep carbonates were observed, representing the first documented case of microbially-produced BC in natural settings — may account for 1-26% of total BC content. Examination of the radiocarbon (Δ<sup>14</sup>C) compositions suggests that BC is usually of greater age than the associated organic carbon. Given that the organic carbon found in seeps typically exhibits an ancient age, BC originating from seeps could serve as a plausible origin of aged dissolved BC in the deep sea.
DOI: 10.6084/m9.figshare.28877909.v1
title: Congenital Cataract

description: Long term congenital cataract surgery results
DOI: 10.6084/m9.figshare.3363958
title: JUB1 suppresses <i>Pseudomonas syringae</i>-induced defense responses through accumulation of DELLA proteins

description: Phytohormones act in concert to coordinate plant growth and the response to environmental cues. Gibberellins (GAs) are growth-promoting hormones that recently emerged as modulators of plant immune signaling. By regulating the stability of DELLA proteins, GAs intersect with the signaling pathways of the classical primary defense hormones, salicylic acid (SA) and jasmonic acid (JA), thereby altering the final outcome of the immune response. DELLA proteins confer resistance to necrotrophic pathogens by potentiating JA signaling and raise the susceptibility to biotrophic pathogens by attenuating the SA pathway. Here, we show that JUB1, a core element of the GA - brassinosteroid (BR) - DELLA regulatory module, functions as a negative regulator of defense responses against <i>Pseudomonas syringae</i> pv. <i>tomato</i> DC3000 (<i>Pst</i> DC3000) and mediates the crosstalk between growth and immunity.
DOI: 10.6084/m9.figshare.3567990.v1
title: Appendix A. Tables and figures reporting correlations between nutrient concentrations and resorption efficiencies and climatic variables (altitude, mean annual temperature, and mean annual precipitation).

description: Tables and figures reporting correlations between nutrient concentrations and resorption efficiencies and climatic variables (altitude, mean annual temperature, and mean annual precipitation).
DOI: 10.6084/m9.figshare.5125747.v1
title: Supplementary Material for: The Human IgE Repertoire

description: IgE is a key mediator in allergic diseases. However, in strong contrast to other antibody isotypes, many details of the composition of the human IgE repertoire are poorly defined. The low levels of human IgE in the circulation and the rarity of IgE-producing B cells are important reasons for this lack of knowledge. In this review, we summarize the current knowledge on these repertoires both in terms of their complexity and activity, i.e. knowledge which despite the difficulties encountered when studying the molecular details of human IgE has been acquired in recent years. We also take a look at likely future developments, for instance through improvements in sequencing technology and methodology that allow the isolation of additional allergen-specific human antibodies mimicking IgE, as this certainly will support our understanding of human IgE in the context of human disease in the years to come.
DOI: 10.17632/yvyd4kbxy3
title: Data for: Quantitative easing in the US and financial cycles in emerging markets

description: This is replication data for "Quantitative easing in the US and financial cycles in emerging markets" by Marcin Kolasa and Grzegorz Wesołowski, published in Journal of Economic Dynamics and Control 149: 104631 (2023).
DOI: 10.6084/m9.figshare.29099291.v1
title: Evaluation of ankle proprioception and instability among individuals with and without flexible flatfoot- a comparative study

description: This study compares the differences in ankle proprioception and ankle instability among young adults aged 18 to 30 with and without flatfoot. 153 students participated voluntarily and were screened using the navicular drop test and selected based on inclusion and exclusion criterias. 75 subjects were determined as having flexible flatfoot and 78 without flexible flatfoot. Ankle proprioception was assessed using joint position sense test by a digital inclinometer, while ankle instability was assessed using anterior drawer test for the laxity of ATFL.This dataset contains clinical measurements collected as a part of this study.<b>Sheet 1</b>: Combined data of all participants with corresponding assessment values.<b>Sheet 2 (with)</b>: Data specific to individuals identified with flatfoot.<b>Sheet 3(</b><b>without)</b>: Data specific to individuals without flatfoot.<b>Variables Included</b>:<b>Participant Id</b>: Unique ID for each participant.<b>Age</b>: Age in years.<b>Gender</b>: Participant’s gender.<b>BMI</b>: Body Mass Index (kg/m²).<b>Navicular Drop Test (NDT)</b>: Measured in mm for both right and left feet.<b>Joint Position Error (JPE)</b>: Error in degrees for both sides.<b>Anterior Drawer Test (ADT)</b>: Measurement of ankle joint laxity in cm for both right and left ankles.<b>Ethical Approval: </b>The ICMR National Ethical Guidelines for biomedical and health research involving human participants 2017 is followed. The study was approved by the ethical committee of Yenepoya ethics committee 2 on 14/05/2024 (protocol number- YEC2/2024/111).
DOI: 10.6084/m9.figshare.4005132.v1
title: Análisis del diagnóstico ambiental, mediante el reconocimiento de los problemas y sus causas raíces en la problemática del ecosistema, Río Manzanares a través del desarrollo de una Cadena Causal según Metodología GIWA

description: Desarrollar un sistema integrado que posibilite la evaluación de la calidad de las aguas internacionales que sirva para identificar las áreas prioritarias donde se aplicarán acciones correctivas y mitigadoras para lograr medidas ambientales significativas a niveles nacionales, regionales y globales.
DOI: 10.6084/m9.figshare.5553493.v1
title: Persistence length calculation

description: Persistence length calculation based on single nanofilament.<br>
DOI: 10.17632/n78tkm784n
title: Electrochemical impedance spectroscopy (EIS) data of a solid oxide electrolysis (SOEC) stack operated under different operating conditions

description: This dataset consists of a series of EIS data recorded from a cell within a ten-layer SOEC stack operated under 100 different operating conditions.
DOI: 10.6084/m9.figshare.14681499.v3
title: Data for Zahn et al. 2021

description: Data repository for echolocation parameters (sonar beam estimates and spectra) for Zahn et al. paper: Vertical sonar beam width and scanning behavior of wild belugas (Delphinapterus leucas) in West Greenland
DOI: 10.6084/m9.figshare.19372292.v1
title: MILe-ViCe training and validation datasets

description: Contains two folders (datasets, labels and labels_adden) to train and validate MILe-ViCe.<br>Content explanation: <br>- datasets - contains hdf5 datasets with morphometric characterisations of blood cells (WBC and RBC) separately and blood counts. These data are available for both the training (blood_counts_no_header.csv, wbc_subset.h5 and rbc_subset.h5) and testing (blood_count_data_adden_2.csv, wbc_adden_2_subset.h5 and rbc_adden_2_subset.h5)- labels - contains the labels used for training- labels_adden - contains the labels used for testing
DOI: 10.6084/m9.figshare.24523768.v1
title: Database vine segmentation Serbia

description: The purpose of this paper is to identify specific market segments of wine consumers in Serbia, based on demographic, psychographic and behavioural characteristics and their preferences towards wines produced by innovative aging technologies. The data were collected using an online survey, whereby the participants were recruited through personal and professional social networks. A total of 269 responses were obtained. The obtained results may be applied by domestic winemakers in order to improve promotion activities, and increase wine consumption in producing countries.
DOI: 10.6084/m9.figshare.4700275.v1
title: Investigating the running abilities of Tyrannosaurus rex using stress-constrained multibody dynamic analysis

description: GaitSym software and models to simulate running in Tyrannosaurus rex.<br>
DOI: 10.6084/m9.figshare.1297403.v1
title: Fossil-based comparative analyses reveal ancient marine ancestry erased by extinction in ray-finned fishes

description: ABSTRACT The marine-freshwater boundary is a major biodiversity gradient and few groups have colonized both systems successfully. Fishes have transitioned between habitats repeatedly, diversifying in rivers, lakes, and oceans over evolutionary time. However, their history of habitat colonization and diversification is unclear based on available fossil and phylogenetic data. We estimate ancestral habitats and diversification and transition rates using a large-scale phylogeny of extant fish taxa and one containing a massive number of extinct species. Extant-only phylogenetic analyses indicate freshwater ancestry, but inclusion of fossils reveal strong evidence of marine ancestry in lineages now restricted to freshwaters. Diversification and colonization dynamics vary asymmetrically between habitats, as marine lineages colonize and flourish in rivers more frequently than the reverse. Our study highlights the importance of including fossils in comparative analyses, showing that freshwaters have played a role as refuges for ancient fish lineages, a signal erased by extinction in extant-only phylogenies.
DOI: 10.6084/m9.figshare.14401184.v3
title: R objects for all references

description: The rda files for all the references for easy input into R. Each file contains the mRNA and DNAm references for a tissue.
DOI: 10.6084/m9.figshare.25052453.v1
title: All geometries and embedded charge positions used in the calculation of vertical ionization energies and vertical electron affinity calculations from charged droplet simulations.

description: These are configurations extracted from ReaxFF/CGeM simulations of water with excess of either hydroxide or hydronium. The configurations were used to compute the effect of excess charge on the vertical ionization energy and vertical electron affinity of hydroxide and hydronium, respectively. The configurations include both the cluster used in an electronic structure calculation and the embedded charges extracted from the MD simulation which are used to represent the environment.
DOI: 10.6084/m9.figshare.28477262.v1
title: Image source data files for: <i>Phollow reveals in situ phage transmission dynamics in the zebrafish gut microbiome at single-virion resolution</i>

description: This dataset contains microscopy images associated with the research article (https://doi.org/10.1038/s41564-025-01981-1): <i>Phollow reveals in situ phage transmission dynamics in the zebrafish gut microbiome at single-virion resolution</i>
DOI: 10.6084/m9.figshare.3556761.v1
title: Appendix C. Results from the OLS regressions exploring temporal autocorrelation.

description: Results from the OLS regressions exploring temporal autocorrelation.
DOI: 10.17632/462s4m8w8k
title: Bangladeshi Leaf Disease Detection Dataset

description: This Dataset focuses on Leaf Disease Detection to identify and classify diseases affecting 
plant leaves. The goal is to develop a method for early detection, improving agricultural 
practices, reducing pesticide use, and increasing crop yields. 
The study includes four plant species: 
 ● Beans (2032) 
 ● Corn ( 706)
 ● Red Amaranth (401)
Location: Leaf images, both healthy and diseased, were collected from different sources 
Located in Bangladesh. 

Dataset Amount: 
1.Original Data: 3139

The dataset consists of visual images aimed at training models for disease detection and 
classification.
DOI: 10.17632/fcb47rngbd
title: KERATOCONUS WITH PENTACAM INDICES

description: KERATOCONUS WITH PENTACAM INDICES
DOI: 10.17632/t93byrznm6
title: Western blot of tau isoform expression

description: Western blots showing the expression of dephosphorylated tau isoforms in fetal brain, adult brain, and microRNA-mediated directly reprogrammed neurons.
DOI: 10.17632/tw2h76hnsg
title: Solar lentigo longitudinal study supplemental material

description: Supplemental material for the short letter published in JAAD about a longitudinal study performed on Solar Lentigo and describing pattern evolution through dermatoscopy.
DOI: 10.17632/vp2xnb8zmb
title: Banana_Tree_Disease_Detection_Dataset(BTDDD)

description: The dataset is a collection of images representing various conditions of bananas, specifically aimed at training machine learning models for image classification or augmentation tasks. The dataset is organized into multiple subfolders, each representing a different condition or class of bananas. These classes include:

Healthy Bananas
Bananas with Fusarium Wilt
Bananas with Natural Leaf Death
Bananas with Rhizome Root Issues
Each image in the dataset is initially stored in its respective class folder and typically contains a banana or bananas under different conditions, viewed from different angles, and possibly with varying levels of resolution or lighting.

The dataset is then processed for various machine learning tasks like classification, detection, or augmentation. Specifically, this dataset is aimed at providing a variety of augmented images to ensure a more robust training set, which is critical for improving the generalization performance of machine learning models.

Note for Researchers Using the dataset

This dataset was created by Shuvo Kumar Basak. If you use this dataset for your research or academic purposes, please ensure to cite this dataset appropriately. If you have published your research using this dataset, please share a link to your paper. Good Luck.
DOI: 10.6084/m9.figshare.17195009.v3
title: Vegetation photosynthetic phenology metrics in northern terrestrial ecosystems: a dataset derived from a gross primary productivity product based on solar-induced chlorophyll fluorescence

description: Data description： <br> This product provides annual (2001-2020) 0.05 degree vegetation photosynthetic phenology (i.e., start of season-SOS; end of season-EOS; length of season-LOS) in terrestrial ecosystems of the Northern Hemisphere. The files includes two types: first growing season in ecosystems of the single and the double growing season; second growing season in ecosystems of the double growing season. <br> In each rar file, it includes SOS or EOS or LOS of every year (format: nc, NetCDF). In each nc file, including: Phenology metrics with 10% threshold; 5th percentile phenology metrics with 10% threshold;<br> 95th percentile phenology metrics with 10% threshold;<br> Phenology metrics with 25% threshold; 5th percentile phenology metrics with 25% threshold;<br> 95th percentile phenology metrics with 25% threshold; Phenology metrics with 50% threshold; 5th percentile phenology metrics with 50% threshold;<br> 95th percentile phenology metrics with 50% threshold. <br> Geographic coordinate reference: WGS84 <br> Value information, 'NAN': no data; '0': barren and sparse landcover. <br> Any questions about this data can be corresponded to Dr. Jing Fang (jingfang@mail.bnu.edu.cn)<br> <br> <br>
DOI: 10.6084/m9.figshare.21443799.v1
title: Data and Code for Forest fire size amplifies postfire land surface warming

description: Data and Code for Forest fire size amplifies postfire land surface warming