cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/60yda-dxh12
title: E.coli minicell/Pul T2SS

description: grid box YWC250strain PAP5359 (minCDE knockout)
description: <strong>Tilt Series Date:</strong> 2017-04-17</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain provided by Ingrid Guilvout in Olivera Francetic lab</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-04-17-23/rawdata/</p>20170417_YWC250_10023.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-04-17-23/rawdata/20170417_YWC250_10023.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170417_YWC250_10023_part121_7.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-04-17-23/3dimage_83908/20170417_YWC250_10023_part121_7.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/a037q-6ar43
title: M. xanthus PilY1.3-sfGFP

description: PilY1.3-sfGFP (SA7661+pMAT321)Grid box YWC262
description: <strong>Tilt Series Date:</strong> 2017-11-27</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain form Lotte Sogaard-Andersen</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-11-27-22/rawdata/</p>20171127_YWC262_10022.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-11-27-22/rawdata/20171127_YWC262_10022.mrc"
        > <i class="download icon"></i> Download </a></p>

        20171127_YWC262_10022.rec,  Reconstruction (Pixel Size 1.56 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-11-27-22/3dimage_90579/20171127_YWC262_10022.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/346ew-c6x42
title: hupAB knockout_M9_PS151

description: Andrew's DNA project
description: <strong>Tilt Series Date:</strong> 2016-08-24</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown for 31h from glycerol stock. Froze when OD was 0.41 as such, no spinning. Cell density and distribution looked good.</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-08-24-2/rawdata/</p>hupABM9_atlas10001.mrc,  Tilt Series (Pixel Size 0.6 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-08-24-2/rawdata/hupABM9_atlas10001.mrc"
        > <i class="download icon"></i> Download </a></p>

        hupABM9_atlas10001.rec,  Reconstruction (Pixel Size 2.4 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2016-08-24-2/3dimage_78474/hupABM9_atlas10001.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/s1qfh-rke27
title: H. pylori 26695 WT

description: grid box YWC259
description: <strong>Tilt Series Date:</strong> 2017-07-06</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Helicobacter pylori</p>
<strong>Strain:</strong> 26695</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-06-22/rawdata/</p>20170706_YWC259_10023.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-06-22/rawdata/20170706_YWC259_10023.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170706_YWC259_10023.rec,  Reconstruction (Pixel Size 1.56 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-06-22/3dimage_85678/20170706_YWC259_10023.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/sbft1-xzz85
title: Pseudomonas aerugionsa PAO1

description: WT Pseudomonas aeruginosa
description: <strong>Tilt Series Date:</strong> 2015-05-29</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  aba2015-05-29-52_slicer13856.jpg: Pilus in PAO1 aba2015-05-29-52_slicer13857.jpg: filament bundle in PAO1
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-52/rawdata/</p>WTPAO1NEW0021.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-52/rawdata/WTPAO1NEW0021.mrc"
        > <i class="download icon"></i> Download </a></p>

        WTPAO1NEW0021_part121_2.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-52/3dimage_57605/WTPAO1NEW0021_part121_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/gpjte-cz326
title: nanowires+type4pili+34000mag+-4d

description: These cells were imaged to detect nanowires (grown using serum bottles) but we did not find them. We found type 4 pili instead.
description: <strong>Tilt Series Date:</strong> 2015-03-07</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Shewanella oneidensis</p>
<strong>Strain:</strong> MR-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -6.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Moh at USC</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-03-07-17/rawdata/</p>atlas2_2_34000mag0017.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-03-07-17/rawdata/atlas2_2_34000mag0017.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas2_2_34000mag0017_part121_12.rec,  Reconstruction (Pixel Size 1.28 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-03-07-17/3dimage_52810/atlas2_2_34000mag0017_part121_12.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/5dz29-5zq25
title: PW 1305

description: Pseudomonas aeruginosa strain PW 1305. Acquired from the Transposon mutant collection. (F7 CheW PW1305 phoAwp03q4D05).
description: <strong>Tilt Series Date:</strong> 2015-02-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: 10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Streak on LB plates and incubate overnight at 37°C- Inoculate 5 mL MOPS Minimal Media Limited Nitrogen from plate and grow at 30°C for ~24 hours</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-02-23-12/rawdata/</p>PseudomonasdeltaF7CheWTM0012.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-02-23-12/rawdata/PseudomonasdeltaF7CheWTM0012.mrc"
        > <i class="download icon"></i> Download </a></p>

        PseudomonasdeltaF7CheWTM0012_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-02-23-12/3dimage_52206/PseudomonasdeltaF7CheWTM0012_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/pjx8r2
title: Angelo State Natural History Collections (ASNHC) Bird specimens (Arctos)

description: The ASNHC Bird Collection totals approximately 2,500 specimens. The primary geographic area of representation is the western Edwards Plateau of Texas. A minor collection from Guyana, South America, is also present. A significant portion (about 35 percent) of the collection is of teaching material (zoo or pet trade specimens). The collection was established in 1968 and remained relatively small for 20 years. Within the last decade, collection organization has formalized and the rate of specimen addition has accelerated.
DOI: 10.22002/3v0rs-e5738
title: Dflg

description: This is a flagellum mutant from Sahand (ATP connected) grown in serum bottle. We saw with perfusion setup that the same mutant makes nanowires. So I went back and imaged the serum bottle version just to make sure that it doesnt have nanowires.
description: <strong>Tilt Series Date:</strong> 2015-08-20</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Shewanella oneidensis</p>
<strong>Strain:</strong> MR-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Moh and Sahand</p>
<strong>Sample Preparation:</strong> same as before</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-08-20-18/3dimage_60953/</p>dflgwithnanowires_atlas10018_part61_7.rec,  Reconstruction (Pixel Size 2.4 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-08-20-18/3dimage_60953/dflgwithnanowires_atlas10018_part61_7.rec"
        > <i class="download icon"></i> Download </a></p>

        dflgwithnanowires_atlas10018.mrc,  Tilt Series (Pixel Size 0.6 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-08-20-18/rawdata/dflgwithnanowires_atlas10018.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/3trfs-9hj68
title: P. gingivalis ABK mutant

description: Raw data files of P. gingivalis ABK mutant
description: <strong>Tilt Series Date:</strong> 2017-12-11</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2017-12-11-39/rawdata/</p>Pgin4_0003.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2017-12-11-39/rawdata/Pgin4_0003.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pgin4_0003_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2017-12-11-39/3dimage_91185/Pgin4_0003_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/t85ff-6da36
title: H. pylori 26695 WT

description: grid box YWC259
description: <strong>Tilt Series Date:</strong> 2017-07-06</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Helicobacter pylori</p>
<strong>Strain:</strong> 26695</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain and sample prepared by Carrie Shaffer</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-06-84/rawdata/</p>20170706_YWC259_10085.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-06-84/rawdata/20170706_YWC259_10085.mrc"
        > <i class="download icon"></i> Download </a></p>

        20170706_YWC259_10085.rec,  Reconstruction (Pixel Size 1.56 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-07-06-84/3dimage_85814/20170706_YWC259_10085.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/fqn0j-v2377
title: Caulobacter del-tipN

description: delta-tipN (strain 5993)Grid box YWC266
description: <strong>Tilt Series Date:</strong> 2017-12-01</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Patrick Viollier</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-12-01-30/rawdata/</p>20171201_YWC266_10031.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-12-01-30/rawdata/20171201_YWC266_10031.mrc"
        > <i class="download icon"></i> Download </a></p>

        20171201_YWC266_10031_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2017-12-01-30/3dimage_90929/20171201_YWC266_10031_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/a1res-50r10
title: twitching Pseudomonas delta-pilH

description: Box YWC213delta-pilH hyperpiliated mutantCells incubated on mucin-coated grid to promote twitching
description: <strong>Tilt Series Date:</strong> 2016-05-31</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sample prepared in collaboration with Alex Persat</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-05-31-22/rawdata/</p>20160531_YWC213_10021.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-05-31-22/rawdata/20160531_YWC213_10021.mrc"
        > <i class="download icon"></i> Download </a></p>

        20160531_YWC213_10021_part121_11.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-05-31-22/3dimage_75063/20160531_YWC213_10021_part121_11.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/vtagc-kv440
title: nanowires+type4pili+22500mag+-5d

description: These cells were imaged to detect nanowires (grown using serum bottles) but we did not find them. We found type 4 pili instead.
description: <strong>Tilt Series Date:</strong> 2015-03-06</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Shewanella oneidensis</p>
<strong>Strain:</strong> MR-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 55.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Moh at USC</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-03-06-16/rawdata/</p>atlas1_22500mag0017.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-03-06-16/rawdata/atlas1_22500mag0017.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas1_22500mag0017_full.rec,  Reconstruction (Pixel Size 1.92 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-03-06-16/3dimage_52762/atlas1_22500mag0017_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/rph79-15v03
title: Pleosinus fermentans

description: Gram negative sporulator
description: <strong>Tilt Series Date:</strong> 2015-05-05</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Pelosinus fermentans</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> ATCC, eric matson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> anaerobic</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-05-3/rawdata/</p>Pfermentans_new0003.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
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        Pfermentans_new0003_full.rec,  Reconstruction (Pixel Size 2.4 nm), 712.7 MB  
        
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