cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.v9mhog
title: Occurrence Download

description: A dataset containing 6052 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Larix kaempferi (Lamb.) Carrière",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1970",
 "Year is less than or equal to 2017",
 "DecimalLongitude is greater than or equal to -15",
 "DecimalLongitude is less than or equal to 40",
 "DecimalLatitude is greater than or equal to 30",
 "DecimalLatitude is less than or equal to 75"
 ]
}

 The dataset includes 6052 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008767-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tkvht6
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acridocarpus ugandensis Sprague"
 ]
}

 The dataset includes 18 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014935-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.am9jgq
title: Occurrence Download

description: A dataset containing 1359 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Lanius somalicus Hartlaub & Heuglin, 1859"
 ]
}

 The dataset includes 1359 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023192-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j25m8e
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Microhyla aurantiventris Nguyen, Poyarkov, Nguyen, Nguyen, Tran, Gorin, Murphy & Nguyen, 2019"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040324-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kdpzv1
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhegmatorhina melanosticta brunneiceps Chapman, 1928"
 ]
}

 The dataset includes 16 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008768-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zqjjk9
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dicliptera swynnertonii S.Moore"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023234-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5ette
title: Occurrence Download

description: A dataset containing 384 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bradypus tridactylus Linnaeus, 1758",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 384 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008768-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zty3dk
title: Occurrence Download

description: A dataset containing 3013 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Sweden, Estonia, Switzerland, Austria, Italy, Greece, Bulgaria, Ukraine)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Caloplaca cerina (Hedw.) Th.Fr."
 ]
}

 The dataset includes 3013 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050430-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2vajx7
title: Occurrence Download

description: A dataset containing 185 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diospyros hirsuta L.f."
 ]
}

 The dataset includes 185 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023256-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uedigt
title: Occurrence Download

description: A dataset containing 111952 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Meles meles (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 111952 records from 184 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008768-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k33qcb
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Odorrana indeprensa (Bain & Stuart, 2006)"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040361-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pkj9qr
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Impatiens qingchengshanica Y.M.Yuan, Y.Song & X.J.Ge"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028053-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sb4dn5
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Sarcohyla psarosema (Campbell & Duellman, 2000)"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040330-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bzjkto
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carangoides Bleeker, 1851",
 "Country is India"
 ]
}

 The dataset includes 91 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010507-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q2skv6
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dicliptera undulata (Vahl) Karthik. & Moorthy"
 ]
}

 The dataset includes 37 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023262-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7fep6f
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Nimbaphrynoides occidentalis (Angel, 1943)"
 ]
}

 The dataset includes 36 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040325-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4ys96a
title: Occurrence Download

description: A dataset containing 425 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Lanius validirostris Ogilvie-Grant, 1894"
 ]
}

 The dataset includes 425 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023200-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u2xnnv
title: Occurrence Download

description: A dataset containing 252 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Larix sibirica Ledeb.",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1970",
 "Year is less than or equal to 2017",
 "DecimalLongitude is greater than or equal to -15",
 "DecimalLongitude is less than or equal to 40",
 "DecimalLatitude is greater than or equal to 30",
 "DecimalLatitude is less than or equal to 75"
 ]
}

 The dataset includes 252 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008768-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f9akqj
title: Occurrence Download

description: A dataset containing 194646 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phragmatobia fuliginosa (Linnaeus, 1758)"
 ]
}

 The dataset includes 194646 records from 518 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023260-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y2b5sf
title: Occurrence Download

description: A dataset containing 1691 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Perna viridis (Linnaeus, 1758)"
 ]
}

 The dataset includes 1691 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039210-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j8twzv
title: Occurrence Download

description: A dataset containing 88650 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Petrogale assimilis Ramsay, 1877, Petrogale brachyotis (Gould, 1840), Petrogale burbidgei Kitchener & Sanson, 1978, Petrogale concinna Gould, 1842, Petrogale herberti Thomas, 1926, Petrogale persephone Maynes, 1982, Petrogale xanthopus celeris Le Souef, 1924, Petrogale rothschildi Thomas, 1904, Macropus Shaw, 1790)",
 "Year 2018-2020"
 ]
}

 The dataset includes 88650 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014894-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.expeoz
title: Occurrence Download

description: A dataset containing 3150030 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rubiaceae",
 "HasCoordinate is TRUE",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Literature Occurrence"
 ]
 }
 ]
}

 The dataset includes 3150030 records from 1497 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008768-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xu9h6q
title: Occurrence Download

description: A dataset containing 3621 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((76.73412 8.642117, 76.84672 8.642117, 76.84672 8.747724, 76.73412 8.747724, 76.73412 8.642117))",
 "Year is greater than or equal to 2013",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 3621 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019159-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14029153
title: ROSMAP meQTL Results for Oligodendrocytes with regionalpcs and averages

description: This dataset contains methylation quantitative trait loci (meQTL) results for the following study:

"regionalpcs improve discovery of DNA methylation associations with complex traits"

Tiffany Eulalio*1, Min Woo Sun1, Olivier Gevaert1, Michael D. Greicius2, Thomas J. Montine3, Daniel Nachun*‡3, Stephen B. Montgomery*‡1,3

‡ These authors contributed equally as senior authors

* Corresponding authors: Tiffany Eulalio (eulalio@alumn.stanford.edu), Daniel Nachun (dnachun@stanford.edu), Stephen B. Montgomery (smontgom@stanford.edu)

 Author affiliations:

1.     Department of Biomedical Data Science, Stanford University, Stanford, CA

2.     Department of Neurology & Neurological Sciences, Stanford University, Stanford, CA

3.     Department of Pathology, Stanford University, Stanford, CA

 

Dataset description:

This dataset contains QTL results generated from FastQTL, organized by region type (full gene, gene body, preTSS, and promoters) and summary types (averages and regional principal components).

Contents:



Parquet tar files: These compressed archives contain output files in Parquet format from FastQTL, split by chromosome. parquet1 includes chromosomes 1-10, and parquet2 includes chromosomes 11-22.

cis_qtl_summary_stats.csv: Provides summary statistics for each phenotype-variant pair, including effect sizes, p-values, TSS distances, and additional details.

cis_qtl.signif_pairs.csv: Contains the significant QTL results identified by FastQTL.

cis_qtls.time_to_run.txt: Reports the running time for FastQTL analysis.

cis_qtls.cis_qtl.txt.gz: Contains comprehensive results for all cis QTLs.


This dataset is intended to support replication and further exploration of QTL associations across different genomic regions and summary methods.
DOI: 10.15468/dl.xc3uru
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Honduras",
 "TaxonKey is Myotis albescens (E.Geoffroy, 1806)"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019160-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fyzn2m
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((81.91714 27.09511, 82.01833 27.09511, 82.01833 27.17966, 81.91714 27.17966, 81.91714 27.09511))",
 "Year is greater than or equal to 2013",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 18 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019161-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.53xr2x
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Honduras",
 "TaxonKey is Myotis elegans Hall, 1962"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019162-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cp8m4u
title: Occurrence Download

description: A dataset containing 1782900 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Norway",
 "Repatriated is true"
 ]
}

 The dataset includes 1782900 records from 1539 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019136-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14028090
title: ROSMAP meQTL Results for Astrocytes with regionalpcs and averages

description: This dataset contains methylation quantitative trait loci (meQTL) results for the following study:

"regionalpcs improve discovery of DNA methylation associations with complex traits"

Tiffany Eulalio*1, Min Woo Sun1, Olivier Gevaert1, Michael D. Greicius2, Thomas J. Montine3, Daniel Nachun*‡3, Stephen B. Montgomery*‡1,3

‡ These authors contributed equally as senior authors

* Corresponding authors: Tiffany Eulalio (eulalio@alumn.stanford.edu), Daniel Nachun (dnachun@stanford.edu), Stephen B. Montgomery (smontgom@stanford.edu)

 Author affiliations:

1.     Department of Biomedical Data Science, Stanford University, Stanford, CA

2.     Department of Neurology & Neurological Sciences, Stanford University, Stanford, CA

3.     Department of Pathology, Stanford University, Stanford, CA

 

Dataset description:

This dataset contains QTL results generated from FastQTL, organized by region type (full gene, gene body, preTSS, and promoters) and summary types (averages and regional principal components).

Contents:



Parquet tar files: These compressed archives contain output files in Parquet format from FastQTL, split by chromosome. parquet1 includes chromosomes 1-10, and parquet2 includes chromosomes 11-22.

cis_qtl_summary_stats.csv: Provides summary statistics for each phenotype-variant pair, including effect sizes, p-values, TSS distances, and additional details.

cis_qtl.signif_pairs.csv: Contains the significant QTL results identified by FastQTL.

cis_qtls.time_to_run.txt: Reports the running time for FastQTL analysis.

cis_qtls.cis_qtl.txt.gz: Contains comprehensive results for all cis QTLs.


This dataset is intended to support replication and further exploration of QTL associations across different genomic regions and summary methods.
DOI: 10.15468/dl.b6gn8j
title: Occurrence Download

description: A dataset containing 3505 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((79.25461 19.92062, 79.34277 19.92062, 79.34277 20.01999, 79.25461 20.01999, 79.25461 19.92062))",
 "Year is greater than or equal to 2013",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 3505 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019163-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bagqds
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Honduras",
 "TaxonKey is Myotis pilosatibialis LaVal, 1973"
 ]
}

 The dataset includes 50 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019164-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r4725x
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((82.13474 27.39115, 82.21092 27.39115, 82.21092 27.45886, 82.13474 27.45886, 82.13474 27.39115))",
 "Year is greater than or equal to 2013",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 21 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019165-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x6vtv8
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Honduras",
 "TaxonKey is Myotis riparius Handley, 1960"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019166-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.