cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25919/5e7951b49d279
title: Solenosmilia matrix annotations and VME habitat identification in video from voyage IN2018_V06

description: Benthic video collected during the MNF Investigator voyage IN2018_V06, sampling seamounts off Tasmania, were annotated for the matrix-forming stony coral Solenosmilia variabilis (Metadata description in MarLIN). The present data set is a sub-set of the collection, processed for analyses presented in Williams et al. 2020, Frontiers in Marine Science (doi: 10.3389/fmars.2020.00187), where a method of identifying Vulnerable Marine Ecosystem (VME) habitats was applied and tested, using these data.
DOI: 10.15472/tadlpy
title: Biodiversidad de microorganismos endofitos de manglar en la reserva de Biosfera Seaflower, expedición 2019

description: Se estudio la biodiversidad de microorganismos (hongos y bacterias) endófitos (cultivables) de las especies de manglar Avicennia germinans y Rhizophora mangle de la reserva de la biosfera Seaflower. Este recurso contiene 17 registros distribuidos en Hongos (9) y Bacterias (8).
DOI: 10.17031/6582c98618745
title: 2009-2015 Suffolk Biological Records Centre (SBRC) Suffolk records for Undaria pinnatifida and Crepidula fornicata

description: A collection of Non-Native Species sightings from Suffolk Biological Records Centre (SBRC). The species listed are Undaria pinnatifida and Crepidula fornicata.
DOI: 10.21966/shnm-s480
title: Trawl Data from the FV Northwest Explorer during the 2022 International Year of the Salmon Pan-Pacific Winter High Seas Expedition
title: Donn�es de chalut du RV NW Explorer lors de l'exp�dition hivernale en haute mer panpacifique 2022 de l'Ann�e internationale du saumon

description: This data set contains the at sea data collected aboard the FV Northwest Explorer for the IYS survey in 2022 in the northwestern Gulf of Alaska. This data package contains three separate components; event, catch, and specimen. The event data contains all of the sampling event information, including time, location, and duration. All dates and times are in UTC, and all length measurements are in meters. The catch data contains all of the catch records, as counts and weights, for each species/taxa at each station. The sampling method for every catch weight should be total weight, and all weights are in kilograms. The specimen data contains individual lengths and weights for sampled individuals from each station. Specimen lengths are in centimeters and specimen weights are in kilograms. To join event information to catch or specimen information, join on the station event id field. To join catch and specimen data, join on the catch id field.
description: Cet ensemble de donn�es contient les donn�es en mer collect�es � bord du FV Northwest Explorer pour le lev� IYS en 2022 dans le nord-ouest du golfe d'Alaska. Ce paquet de donn�es contient trois composants distincts�: �v�nement, capture et sp�cimen. Les donn�es d'�v�nement contiennent toutes les informations d'�v�nement d'�chantillonnage, y compris l'heure, le lieu et la dur�e. Toutes les dates et heures sont en UTC, et toutes les mesures de longueur sont en m�tres. Les donn�es de capture contiennent tous les enregistrements de captures, sous forme de d�nombrements et de poids, pour chaque esp�ce/taxon � chaque station. La m�thode d'�chantillonnage pour chaque poids de capture doit �tre le poids total, et tous les poids sont exprim�s en kilogrammes. Les donn�es d'�chantillons contiennent des longueurs et des poids individuels pour les individus �chantillonn�s de chaque station. Les longueurs des �chantillons sont exprim�es en centim�tres et leur poids est en kilogrammes. Pour joindre des informations d'�v�nement � des informations de capture ou de sp�cimen, rejoignez le champ ID d'�v�nement de la station. Pour joindre les donn�es de capture et de sp�cimen, joignez le champ d'identification de capture.
DOI: 10.14466/cefasdatahub.73
title: Young Fish Survey Data 1981 to 2010

description: Total numbers of individual fish identified during the Cefas Young Fish Survey (YFS) which ran from 1981 to 2010.  The survey deployed a light 2-meter beam trawl to survey inshore locations for small / young fish around the British Isles, predominantly along the south and east coasts. Total numbers of fish (identified to species or if not to the highest taxonomic level) were recorded at each station, and were measured in the majority of cases. The surveys were primarily undertaken to evaluate the abundance of juvenile sole and plaice, as well as providing further information on the abundance of other species of fish. The YFS formed part of the International Young Fish Survey, coordinated by ICES.  The survey used commercial inshore vessels to sample with a light 2 metre beam trawl deployed at fixed (prime) stations, towed for a duration of 10-minues, with varying coverage of the British Isles over the time-series period. From 2000 onwards actual shot and haul positions were recorded, whereas prior to this a single generic position was given for a specific prime station. Fish species were nearly always measured, and on the very few occasions that they were not they were counted. These data are currently undergoing quality assurance. Species-specific records for gobies are known to contain taxonomic errors, and analyses should be undertaken on data aggregated to the level of family (Gobiidae). Data for sand smelt Atherina spp. and smelt Osmerus eperlanus may also be confounded, and data for these taxa should be interpreted with particular care.
DOI: 10.15472/481vr1
title: Evaluación del efecto de esponjas arrecifales en el asentamiento larval de corales escleractinios

description: Este recurso contiene información de 113 ejemplares del coral Favia fragum, que fueron colectados y posteriormente cultivados para su estudio. Adicionalmente, contiene la información de 4 fragmentos de la esponja Amphimedon viridis, 1 fragmento de la esponja Amphimedon compressa y 2 fragmentos de la esponja Aplysina cauliformis. Las colectas fueron realizadas en el marco del proyecto "Evaluación del efecto de esponjas arrecifales en el asentamiento larval de corales escleractinios", durante los 2020 y 2021 en la zona del Rodadero, en Santa Marta.
DOI: 10.15472/io1qvn
title: Diversidad y abundancia de Elasmobranquios en el Parque Nacional Natural Uramba-Bahía Málaga

description: Durante la expedición al Parque Nacional Natural Uramba Bahía Málaga se identificaron el número de especies y abundancia relativa de elasmobranquios por medio de un estudio en el cual se realizaron muestreos con palangres. Se tuvo un total de 32 registro tomados entre noviembre y diciembre de 2021, en los cuales se identificaron 8 especies: 6 especies de tiburones, todas clasificadas como en peligro crítico de extinción, y 2 especies de rayas, una de las cuales no ha sido descrita por la ciencia. Las capturas por unidad de esfuerzo fueron bajas, lo que indica una baja abundancia de elasmobranquios en la zona y el efecto que las pesquerías locales pueden estar teniendo en las poblaciones locales.
DOI: 10.26071/ogsl-1388a9ca-e5a7
title: Localisations GPS de fous de Bassan nichant sur l'Île-Bonaventure saison 2013
title: GPS locations of Northern Gannets nesting in Bonaventure island(2013)

description: Depuis 2012, le Laboratoire d'ornithologie marine de Rimouski (https://ornithologiemarine.wixsite.com/lomr/david-pelletier) a mis en place un programme de suivi annuel du comportement alimentaire des fous de Bassan (Morus bassanus) nichant dans le parc national de l'Île-Bonaventure-et-du-Rocher-Percé (plus spécifiquement sur l'île Bonaventure). Le LOMR est dirigé par Magella Guillemette (professeur à l'Université du Québec à Rimouski) en collaboration avec David Pelletier (professeur au Cégep de Rimouski). Plusieurs dizaines d'étudiant.e.s des niveaux collégial et universitaire (1er, 2e et 3e cycles) ont participé la collecte de ces données. Les données présentes dans cette base de données sont celles de 2013, mais celles au delà de 2017 peuvent être demandées au LOMR en contactant les propriétaires des données. Les localisations ont été enregistrées à l'aide de consignateurs de données GPS, programmés à une fréquence de 5 ou 10 minutes (suivant les années) et fixés sur la queue des oiseaux avec du ruban adhésif blanc de grade marin de marque Tesa.
description: Since 2012, the Rimouski Marine Ornithology Laboratory (LOMR)(https://ornithologiemarine.wixsite.com/lomr/david-pelletier) has implemented an annual monitoring program for the feeding behaviour of gannets (Morus bassanus) nesting in Bonaventure Island and Percé Rock National Park (more specifically on Bonaventure Island). LOMR is directed by Magella Guillemette (professor at the Université du Québec à Rimouski) in collaboration with David Pelletier (professor at the Cégep de Rimouski). Several dozen college and university students (1st, 2nd and 3rd cycles) participated in the collection of this data. The data present in this database are those of 2013, but the more recent ones can be requested from the LOMR by contacting the owners of the data. Locations were recorded using GPS data loggers, programmed at a frequency of 5 or 10 minutes (depending on the year) and attached to the birds' tails with white Tesa marine grade tape.
description: Les déplacements du fou de Bassan ont été enregistrés à l’aide de moniteurs GPS iGotU GT-120 de 20 g (dimension de 44,5 x 28,5 x 13 mm). Les appareils étaient préalablement emballés sous vide et recouverts de ruban Tesa blanc no 4650. Pour minimiser la résistance pendant le vol et éviter que les appareils soit déplacés lors les plongeons, ils ont été attachés au-dessus des quatre rectrices les plus centrales, prêt de la base de la queue des oiseaux. Ils pèsaient en moyenne 32,2 ± 0,1 g une fois emballés, soit 1,08% (± 0.01) de la masse corporelle du fou de Bassan, ce qui ne devait donc pas affecter ses mouvements (Lewis et al., 2002; Fair et al., 2010). Les moniteurs ont enregistré une localisation à un intervalle de 10 min, pendant deux à trois semaines. Ils ont ensuite été récupérés par recapture. Ces enregistrements ont permis de mesurer la durée et la distance totales des déplacements alimentaires des fous de Bassan.
DOI: 10.6092/b3rs-4076
title: Meiofauna monitoring in the Trieste harbour, northern Adriatic Sea (Port Authority), 2013 and 2015

description: Meiofauna monitoring in the Trieste harbour, Northern Adriatic Sea (Port Authority), 2013 and 2015. In June 2013 and March 2015.
description: Sampling was carried out in the harbour of the Trieste port by a KC Haps bottom corer with polycarbonate sample tubes (12.7 cm I.D. with a sample area of 127 cm2). In laboratory, one sediment core was subsampled by means of 3 cut-off plastic syringes (2.7 cm I.D., surface area of 5.72 cm2, 0-10 cm top sediment) in order to obtain three pseudoreplicates for the meiofauna. All data are converted to by multiplying them by a conversion factor (1.66). Meiofaunal organisms (38–1000 m) were extracted from sediment subsamples by sieving each pseudoreplicate and by centrifuging the material retained by a 38 μm mesh net with Ludox HS-40 (density of 1.15–1.18 g cm−3). All meiobenthic organisms were counted and taxonomically classified to the main groups under a stereomicroscope (Olympus SZX12; final magnification of × 32-40).
description: DwC-A file.
DOI: 10.14284/155
title: Community structure and seasonal fluctuation of macrobenthos in a Ceriops tagal mangrove sediment at Gazi Bay in 1992 and 1993
DOI: 10.15472/vlngiu
title: First records of the class Crinoidea (Echinodermata) in the Colombian Pacific Ocean / Primeros registros de la clase Crinoidea (Echinodermata) en el Océano Pacífico colombiano

description: During 2012, the project "Biological and physical baseline in TUM Offshore blocks 6 and 7 subject to hydrocarbon exploration" was developed by the Institute of Marine and Coastal Research (INVEMAR) and the National Hydrocarbon Agency (ANH) of Colombia. This project was carried out in the soft bottoms of the Colombian South Pacific (offshore Nariño department) between 350 and 934 m depth. Among the samples, 411 crinoids (Echinodermata) were collected and deposited in the Marine Natural History Museum of Colombia, organized and catalogued in 9 lots, which constitute the present data set. These records belong to three species (one identified only to family), two genera, two families, one order, and one class. This dataset complements the corresponding scientific publication (in press).
description: Durante el año 2012 se realizó el proyecto “Línea base biológica y física en los bloques TUM Offshore 6 y 7 sujetos a exploración de Hidrocarburos” desarrollado por el Instituto de Investigaciones Marinas y Costeras (INVEMAR) y la Agencia Nacional de Hidrocarburos (ANH) de Colombia. Este proyecto se realizó en fondos blandos del Pacífico Sur colombiano (frente al departamento Nariño) entre 350 y 934 m de profundidad. Entre las muestras se recolectaron 411 crinoideos (Echinodermata), que se depositaron en el Museo de Historia Natural marina de Colombia organizados y catalogados en 9 lotes, los cuales constituyen el presente conjunto de datos. Estos registros pertenecen a tres especies (una identificada solo hasta familia), dos géneros, dos familias, un orden y una clase. Este conjunto de datos complementa la publicación científica correspondiente (en prensa).
DOI: 10.25607/7nxv5v
title: ReefSYN | Standardized datasets of Brazilian reef diversity in space and time - Dataset I: Fish communities from the Brazilian province

description: This dataset is part of a broader compilation named 'Standardized datasets of Brazilian reef diversity in space and time' created from a research network of reef scientists within several projects and collaborations and finally gathered and published by the ReefSYN group.
This dataset, an updated, filtered and curated version of the one used by Morais et al. (2017), includes fish counts and size estimates in 4,570 transects distributed over 137 localities in 20 different locations, spanning from 0° to 27°S (including oceanic islands). This dataset is the foundation of a large network of reef scientists in Brazil, which started as the project SISBIOTAMar and derived into the PELD ILOC and ReefSYN networks.
DOI: 10.25607/zzrggg
title: Fish survey of South Passage Shark Bay, Western Australia: Fishes Checklist

description: In April 1979, 323 species of fish were recorded from the South Passage area of Shark Bay. The majority of these are tropical species (83%), with smaller numbers of warm temperate (11%) and cool temperate (6%) species. Many of the tropical species, however, were found to be present in only low numbers, while some warm temperate and one cool temperate species were abundant. The fishes of South Passage, therefore, are considered to belong to an impoverished tropical fauna. Furthermore, South Passage is the southernmost mainland area of Western Australia which supports a predominantly tropical fish fauna. Its fauna is even more diverse than that of the Houtman Abrolhos, a very much larger area of offshore islands and coral reefs located to the south off Geraldton.
DOI: 10.13120/tk79-bh53
title: Phytoplankton North Adriatic-Gulf of Trieste C1 – LTER time-series 2006-2009

description: Time series of phytoplankton abundance collected with a monthly frequency at 0.5, 5, 10 and 15 meters in the Gulf of Trieste. The time series station C1, located in the Gulf of Trieste in the northernmost part of the Adriatic Sea, is part of the Adriatic Long Term Ecological Research (LTER) site. It is a shallow coastal station (17 m depth) located at 0.2 Km from the coast, at the outer border of the Natural Marine Reserve of Miramare, Trieste. More information about activities carried out and about datasets from other periods can be found at: http://nettuno.ogs.trieste.it/ilter/GoTTs/en_index.html. Samples were fixed with Ca(HCO3)2-buffered formaldehyde (0.8% final concentration) and cell abundance was estimated according to Utermöhl’s method (1958), using an inverted microscope equipped with phase contrast, at 200-320-400x final magnifications. Abundant cells were counted in defined random fields, rarer species were counted on the whole chamber (Fonda Umani et al., 2007).
DOI: 10.14284/275
title: Spatial distribution of meiobenthos in the Voordelta (October 1988)
DOI: 10.21966/dphz-as73
title: Trawl Catch and Species Abundance from the 2019 Gulf of Alaska International Year of the Salmon Expedition
title: Captures au chalut et abondance des espèces dans le golfe de l'Alaska 2019 Année internationale de l'expédition du saumon

description: This dataset contains fish species abundance data and species-specific biometrics data collected in the Northeast Pacific Ocean using a midwater trawl net. These data were collected as part of the International Year of the Salmon (IYS) High Seas Expedition conducted in February and March 2019, to further improve the understanding of factors impacting salmon marine winter survival. A total of 64 tows were conducted, and for each tow the total species-specific weight and catch were recorded. Taxonomic records were identified to the lowest taxonomic rank possible. Additionally, for some species some individual biometrics were recorded, such as (fork, total, standard and/or mantle) length, weight, sex and age class. Furthermore for salmonids, DNA samples, otoliths, muscle tissue, scales and liver/gonad data were collected for further analysis in Alaskan and UBC labs. The data collected from the trawl aims to improve our understanding of the food web structure.
description: Cet ensemble de données contient des données sur l'abondance des espèces de poissons et des données biométriques propres à chaque espèce recueillies dans le nord-est de l'océan Pacifique à l'aide d'un chalut moyen. Ces données ont été recueillies dans le cadre de l'expédition en haute mer de l'Année internationale du saumon (AIYS) menée en février et mars 2019, afin d'améliorer encore la compréhension des facteurs qui influent sur la survie du saumon en hiver en mer. Au total, 64 remorquages ont été effectués, et pour chaque remorquage, le poids total et les prises propres à l'espèce ont été consignés. Les enregistrements taxonomiques ont été identifiés au rang taxonomique le plus bas possible. De plus, pour certaines espèces, certaines données biométriques individuelles ont été enregistrées, telles que la longueur, le poids, le sexe et la classe d'âge (fourche, total, standard et/ou manteau). De plus, pour les salmonidés, des échantillons d'ADN, des otolithes, des tissus musculaires, des écailles et des données sur le foie/gonade ont été recueillis en vue d'une analyse plus poussée dans les laboratoires de l'Alaska et de l'UBC. Les données recueillies au chalut visent à améliorer notre compréhension de la structure du réseau trophique.
DOI: 10.25607/bjffju
title: UNESCO eDNA expedition in Everglades National Park (United States): April 2023

description: This dataset contains the eDNA data collected as a part of the UNESCO eDNA expeditions in Marine World Heritage Sites project in 2022-2024. The project was coordinated in collaboration with the Ocean Biodiversity Information System (OBIS) of IOC-UNESCO and the marine programme of the UNESCO World Heritage Center, and funded by the government of Flanders (Kingdom of Belgium). The samples were collected with citizen science eDNA sampling kits, containing a syringe and a filter, and preserved with Longmire's buffer, before sequencing at a central laboratory. Five different biomarkers were analysed, including 12SMifish, Mimammal, Teleo, 16S-Vert and COI markers. The sequences were analysed with the PacMAN pipeline and quality controlled including a validation check by local scientists and site managers as well as compared to existing knowledge on species distributions in OBIS and GBIF. The full sampling protocols and materials are available on the project website (https://www.unesco.org/en/edna-training-materials?hub=66910), and the bioinformatics pipeline is on github (https://github.com/iobis/PacMAN-pipeline). The data can also be explored on the eDNA expeditions dashboard (https://dashboard.ednaexpeditions.org/).
DOI: 10.14284/599
title: Long-term cetacean monitoring in the Azores based on whale watching observations (2009-2020)

description: The dataset was colected by whale watching companies in the Azores between 2009 and 2020 as a contribution to the long term monitoring of cetaceans. It contains the identification of the species observed, the geographic position of the observation, the life stages and its respective abundance and behavior, as well as related environmental variables (sea state, visibility).
description: "MONICET is a collaborative platform to collect, organize and disseminate cetacean occurrence data and photo-identification images collected by whale watching companies in the Azores. Data were collected from 2009 to 2020 in collaboration with twelve different whale watching companies located in four different islands: São Miguel, Terceira, Pico and Faial. Data was collected and inserted in the MONICET database by qualified guides or biologists onboard and validated by the research team responsible for the MONICET platform."
DOI: 10.15472/dv9vuj
title: Observaciones de Moluscos de la Universidad del Valle (CRM-UV)

description: El presente conjunto de datos corresponde a la observaciones de moluscos de la Universidad del Valle. Contiene 1357 registros correspondientes a 49 especies de moluscos marinos y estuarinos. En esta publicación se incluyen las observaciones (sin espécimen preservado) que estaban incluidas dentro de la publicación de la colección biológica. Por lo tanto los registros aquí mostrados representan un 29.89% de observaciones y fotografías, mientras que el 73.11% son especímenes preservados que se encuentran publicados en la Colección de Referencia de Biología Marina de la Universidad del Valle. Estos registros pertenecen a la región del Pacífico colombiano.
DOI: 10.25607/rov4or
title: Long-term Ecological Monitoring Research Brazilian Oceanic Islands (reef fish)

description: PELD-ILOC (Long Term Ecological Research of Brazilians Oceanic Islands) is a network of Brazilian scientists from several universities and organizations engaged in long-term ecological research of marine biodiversity on the four Brazilian oceanic islands. The network unites researchers to monitoring the marine wildlife all around the St. Peter and St. Paul’s Archipelago, Fernando de Noronha Archipelago, Rocas Atoll and Trindade Island and Martin Vaz Archipelago since 2013. Gaining these long-term knowledge, PELD-ILOC plays a fundamental role in understanding oceanic islands ecosystems and thereby provide the prerequisites for knowledge-based solutions to many current and future environmental problems. The goal of the PELD-ILOC is to provide long-term research to the scientific community, policymakers, and society with the knowledge and predictive understanding necessary to conserve, protect, and manage the Brazilian oceanic islands ecosystems, their biodiversity, and the services they provide. This dataset compiles data from 2006 to 2019 gathered from all four islands at different depths and sites and is related to reef fish (Actinopterygii) species occurrence, size and abundance.
DOI: 10.14284/206
title: Analysis of the macrobenthic community near Nieuwpoort (1970-1971)
DOI: 10.15468/gsa458
title: Galapagos Subtidal Biodiversity

description: Occurrence data of three major groups of marine macro fauna: fish, macro invertebrates, and sessile organisms collected between 1994 – 2022 in the Galapagos Marine Reserve.