cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15201767
title: Biogeochemical Ocean Regions

description: This datasets provides objectively defined and validated biogeochemical regions of the North Atlantic Ocean and its marginal seas. It accompanies the paper Jenniges et al. (2025). Unveiling 3D ocean biogeochemical provinces in the North Atlantic: A systematic comparison and validation of clustering methods. Ecological Informatics, 91, 103390. https://doi.org/10.1016/j.ecoinf.2025.103390. 

This dataset was generated using code available at: https://doi.org/10.5281/zenodo.15202343
description: Column descriptions




Column Name
Description


LEV_M
Upper grid cell depth in meters


LATITUDE
Geographic latitude of the grid cell centre in decimal degrees


LONGITUDE
Geographic longitude of the grid cell centre in decimal degrees


P TEMPERATURE
Average potential temperature of the grid cell in °C


P_SALINITY
Average salinity of the grid cell in psu


P OXYGEN
Average oxygen concentration of the grid cell in μmol kg−1


P_NITRATE
Average nitrate concentration of the grid cell in μmol kg−1


P_SILICATE
Average silicate concentration of the grid cell in μmol kg−1


P_PHOSPHATE
Average phosphate concentration of the grid cell in μmol kg−1


e0
First reduced feature from UMAP dimensionality reduction


e1
Second reduced feature from UMAP dimensionality reduction


e2
Third reduced feature from UMAP dimensionality reduction


volume
Volume of the grid cell in m3


label
Cluster label assigned to the grid cell


uncertainty
NEMI uncertainty of the cluster label of the grid cell


color
Hexadecimal color assigned to the cluster label of the grid cell


water
Binary flag denoting if the grid cell is located on land or in water according to GEBCO bathymetry information (GEBCO Compilation Group, 2022)


imputed
Percentage of parameters that needed to be imputed for the grid cell, e.g. 50 denotes that 50% = 3 of the six parameters were imputed using K-nearest neighbours
DOI: 10.3535/fsr-ztf-4h0
title: †Brachymetopidae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5284/1090382
title: Digital Archive from the Analysing Britain's Most Elusive Roman Sculptures Project

description: This collection comprises 3D models, images, and scan data from the British Academy/Leverhulme Trust funded-project 'Analysing Britain's most elusive Roman sculptures' which examined sculpture from the hinterland of Hadrian's Wall. The study and documentation of these sculptures marks the last task remaining for the completion of the final scheduled British volume of the Corpus Signorum Imperii Romani (CSIR) series of comprehensive surveys of Roman sculpture. The results of this project have been incorporated into Corpus Signorum Imperii Romani: Great Britain. Vol. I, Fasc. 11. The Hinterland of Hadrian's Wall and Derbyshire.
DOI: 10.3535/ewy-akm-l7c
title: †Brachymetopidae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.15468/dl.cx9j87
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Spizella pusilla)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 44 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023624-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ca8phx
title: Occurrence Download

description: A dataset containing 916 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oedera squarrosa"
 ]
}

 The dataset includes 916 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023621-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15974288
title: Power Concentration Sustainability Framework - Open Source Implementation

description: Open source implementation of the mathematical framework from "Power Concentration as a Structural Limit to Sustainability" (submitted to Nature Sustainability).

This software package provides:- Complete implementation of the socio-ecological system model- Critical threshold detection algorithms- Hysteresis analysis tools- Validation of 14 theoretical properties- Interactive demo and comprehensive examples

The framework enables researchers to analyze power concentration effects on sustainability governance across multiple contexts (corporate, energy, international, urban).
DOI: 10.5281/zenodo.15974289
title: Power Concentration Sustainability Framework - Open Source Implementation

description: Open source implementation of the mathematical framework from "Power Concentration as a Structural Limit to Sustainability" (submitted to Nature Sustainability).

This software package provides:- Complete implementation of the socio-ecological system model- Critical threshold detection algorithms- Hysteresis analysis tools- Validation of 14 theoretical properties- Interactive demo and comprehensive examples

The framework enables researchers to analyze power concentration effects on sustainability governance across multiple contexts (corporate, energy, international, urban).
DOI: 10.15468/dl.jmc85n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Spizella pusilla)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023623-250711103210423/datasets/export for details.
DOI: 10.15468/dl.6mhbzm
title: Occurrence Download

description: A dataset containing 411 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Miliusa sclerocarpa, Miliusa parviflora, Miliusa novoguineensis, Miliusa montana, Miliusa mollis, Miliusa macropoda, Miliusa macrocarpa, Miliusa lanceolata, Miliusa koolsii, Miliusa intermedia)"
 ]
}

 The dataset includes 411 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023628-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.asvyn7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus norvegicus",
 "Country is Tuvalu",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023626-250711103210423/datasets/export for details.
DOI: 10.15468/dl.kx446a
title: Occurrence Download

description: A dataset containing 4494 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phragmites australis",
 "Geometry POLYGON((-8.00174339329464 54.1998526673513, 0.202120938926891 54.1998526673513, 0.202120938926891 61.2628565887411, -8.00174339329464 61.2628565887411, -8.00174339329464 54.1998526673513))",
 "CoordinateUncertaintyInMeters is 0,101",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4494 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023627-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15974565
title: Minimal public datasets of spatial metabolomics/lipidomics

description: Explanation

Two datasets are available in this compressed folder, within two subfolders:



LP-example0/

LP-cerebellum-rat/


Each subfolder contains two annotations files (HMDB and LipidMaps) in the form of .csv files,  and the unified intensities into a single `anndata` object in .h5ad file format. 

Instructions:

Download and unzip the folder in your working directory.

Acknowledgements:

To the authors for the two datasets in this folder:



LP-example0: Evan Larson, 2021, at https://metaspace2020.org/dataset/2021-02-10_20h21m12s

LP-cerebellum-rat: Bonjd N, Griffin J, Hall Z et al., 2017, at: https://www.ebi.ac.uk/metabolights/editor/MTBLS487/assays


We also thank Metaspace https://metaspace2020.org where the intensities and annotations can be retrieved with the registires 2021-02-10_20h21m12s and 2025-04-10_14h53m38s respectively (https://metaspace2020.org/dataset/[registry]). 

The datasets were downloaded using the `metaspace-converter` python package, articulated within a custom Python script to unify the intensities into a single anndata object for each dataset.
DOI: 10.15468/dl.nqz45g
title: Occurrence Download

description: A dataset containing 228 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helminthotheca echioides",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 228 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023633-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.syk7sc
title: Occurrence Download

description: A dataset containing 669 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus norvegicus",
 "Country is Ukraine",
 "HasCoordinate is true"
 ]
}

 The dataset includes 669 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023632-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.52xpq4
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Moniana tristis"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023630-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gq76e6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Spizella pusilla)",
 "Country is one of (Algeria, Angola, Benin, Botswana, British Indian Ocean Territory, Burkina Faso, Burundi, Cabo Verde, Cameroon, Central African Republic, Chad, Comoros, Congo, Congo, Democratic Republic of the, Côte d’Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Eswatini, Ethiopia, French Southern Territories, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Ascension and Tristan da Cunha, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, South Sudan, Sudan, Tanzania, United Republic of, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023635-250711103210423/datasets/export for details.
DOI: 10.15468/dl.dt8rmn
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rattus norvegicus",
 "Country is Venezuela (Bolivarian Republic of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023634-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pez35f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Spizella pusilla)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023636-250711103210423/datasets/export for details.
DOI: 10.15468/dl.udtjhy
title: Occurrence Download

description: A dataset containing 625 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oenothera acaulis"
 ]
}

 The dataset includes 625 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023637-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15729658
title: Data set and Supplementary for the article "Pervasive and dynamic release of Cryptic Genetic Variation in Chironomus riparius: Rethinking adaptation in fluctuating environments"
title: first version

description: Gene expression data and Supplementary file
DOI: 10.5281/zenodo.15729657
title: Data set and Supplementary for the article "Pervasive and dynamic release of Cryptic Genetic Variation in Chironomus riparius: Rethinking adaptation in fluctuating environments"
title: first version

description: Gene expression data and Supplementary file
DOI: 10.15468/dl.3u5cv5
title: Occurrence Download

description: A dataset containing 714 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Noturus albater"
 ]
}

 The dataset includes 714 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023639-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m6gqxt
title: Occurrence Download

description: A dataset containing 1127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helminthotheca echioides",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1127 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023640-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rvxrck
title: Occurrence Download

description: A dataset containing 95397 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-73.99736940266777 40.72439391088795, -74.00050831392143 40.725452330790326, -74.00385840714328 40.72602442105077, -74.00729085718878 40.72608817948773, -74.0106736652925 40.72564115395136, -74.01387674566757 40.72470053685504, -74.0167769377875 40.723302502428226, -74.01926274972453 40.721500812472335, -74.02123864868422 40.71936474482287, -74.02262873294544 40.7169764249647, -74.02337964399655 40.7144276642702, -74.02346260767797 40.71181642723723, -74.02287452732493 40.70924306417441, -74.02163808882744 40.70680645450301, -74.019800875692 40.70460020893057, -74.01743353011115 40.702709076130525, -74.01462703227799 40.70120569139477, -74.0114892034018 40.70014779137001, -74.00814056691073 40.69957600099026, -74.00470972617521 40.699512276782905, -74.00132843495781 40.69995906568669, -73.99812654811318 40.700899211313335, -73.9952270444636 40.70229661121044, -73.99274131112348 40.70409760017799, -73.99076486892167 40.70623300709952, -73.98937370228298 40.708620807080074, -73.98862133450119 40.71116926789392, -73.98853676150998 40.71378047069728, -73.9891233249768 40.71635407039271, -73.99035856994388 40.71879115153373, -73.99219509460887 40.72099803163586, -73.99456236159261 40.72288986542427, -73.99736940266777 40.72439391088795))",
 "Year is one of (2019, 2020, 2021, 2022, 2023, 2024, 2025)",
 "KingdomKey is one of (Animalia, Fungi, Plantae)"
 ]
}

 The dataset includes 95397 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023607-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y9stge
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus halepensis",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023642-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fjjdjq
title: Occurrence Download

description: A dataset containing 7056 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helminthotheca echioides",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7056 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023641-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p2tzg5
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helminthotheca echioides",
 "Country is Uruguay",
 "HasCoordinate is true"
 ]
}

 The dataset includes 54 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023643-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s9vdaz
title: Occurrence Download

description: A dataset containing 7511 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oenothera fruticosa"
 ]
}

 The dataset includes 7511 records from 216 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023645-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29581948
title: Time to resumption of antithrombotic therapy in chronic subdural haematoma: a systematic review and meta-analysis

description: Chronic subdural haematoma (CSDH) is common in the elderly, with approximately 40% of patients with CSDH taking anti-thrombotic medications. Surgery necessitates temporary cessation. The optimal time of postoperative antithrombotic resumption is not known, with the risk of recurrence balanced against the risk of thrombosis. A systematic review was carried out (registration number:CRD42023427275). Medline and EMBASE databases were searched. The primary outcome of this study was recurrence. Late and early resumption was defined by study authors - a final definition was not possible given the heterogeneity amongst papers. 7 studies were included in the final analysis (3,195 patients total). Generally, studies reported higher risk of thromboembolic events in patients in late resumption groups (n = 4). On meta-analysis, there was no increased risk of recurrence in the early vs late groups (OR 0.61, 95% CI [0.016; 2.40], I<sup>2</sup> = 0%, p = 0.26). Most studies reported that early resumption was not associated with increased adverse events. Definitions of early and late varied by study (earliest range &lt;3 days to &lt;30 days). We found no significant difference in rates of recurrence, or thromboembolic events in those receiving early or late resumption of antithrombotic medication. Prospective studies with consensus definitions are required to inform clinical decision making and guidelines.
DOI: 10.6084/m9.figshare.29581948.v1
title: Time to resumption of antithrombotic therapy in chronic subdural haematoma: a systematic review and meta-analysis

description: Chronic subdural haematoma (CSDH) is common in the elderly, with approximately 40% of patients with CSDH taking anti-thrombotic medications. Surgery necessitates temporary cessation. The optimal time of postoperative antithrombotic resumption is not known, with the risk of recurrence balanced against the risk of thrombosis. A systematic review was carried out (registration number:CRD42023427275). Medline and EMBASE databases were searched. The primary outcome of this study was recurrence. Late and early resumption was defined by study authors - a final definition was not possible given the heterogeneity amongst papers. 7 studies were included in the final analysis (3,195 patients total). Generally, studies reported higher risk of thromboembolic events in patients in late resumption groups (n = 4). On meta-analysis, there was no increased risk of recurrence in the early vs late groups (OR 0.61, 95% CI [0.016; 2.40], I<sup>2</sup> = 0%, p = 0.26). Most studies reported that early resumption was not associated with increased adverse events. Definitions of early and late varied by study (earliest range &lt;3 days to &lt;30 days). We found no significant difference in rates of recurrence, or thromboembolic events in those receiving early or late resumption of antithrombotic medication. Prospective studies with consensus definitions are required to inform clinical decision making and guidelines.