cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5683/sp3/193lfx
title: Dataset for Monthly Gridded Data Product of Northern Wetland Methane Emissions Based on Upscaling Eddy Covariance Observations

description: This record is for the dataset “Dataset for Monthly Gridded Data Product of Northern Wetland Methane Emissions Based on Upscaling Eddy Covariance Observations” at &lt;a href= "https://doi.org/10.5281/zenodo.2560164"&gt;https://doi.org/10.5281/zenodo.2560164&lt;/a&gt;. 
&lt;p&gt;&lt;p&gt; 

This dataset provides wetland methane (CH4) emissions, their uncertainties and underlying CH4 flux densities north from 45 N using three different wetland maps. The data products are derived using data from several eddy covariance CH4 flux sites, random forest machine learning algorithms and three prescribed wetland maps. The data are at 0.5 by 0.5 deg or 1 by 1 deg resolution, depending on the wetland map used. The dataset covers years 2013 and 2014. CH4 flux densities are provided only for grid cells with &gt; 5 % wetland coverage. &lt;p&gt;
The three data products are provided in netCDF format files (.nc). Please see more details in the attributes saved in the netCDF files.&lt;p&gt; &lt;ul&gt; 

RF-DYPTOP.nc
Upscaling based on DYPTOP dynamic wetland map. At 1 by 1 deg resolution. &lt;p&gt;

RF-GLWD.nc
Upscaling using GLWD static wetland map. At 0.5 by 0.5 deg resolution. &lt;p&gt;

RF-PEATMAP.nc
Upscaling using PEATMAP static wetland map. At 0.5 by 0.5 deg resolution. &lt;/ul&gt; &lt;p&gt;
This data can be downloaded at &lt;a href= "https://doi.org/10.5281/zenodo.2560164"&gt;https://doi.org/10.5281/zenodo.2560164&lt;/a&gt;
description: The first version of dataset can be accessed at https://doi.org/10.5281/zenodo.2560164
DOI: 10.5683/sp3/cukpwg
title: Building Circularity: Diverting end-of-use Textiles from Landfill to Boost Soil Amendment for Urban Farming Furthering Food Security
title: Diverting End-of-Use Textiles

description: Finding innovative solutions to industrial textile waste is an immediate challenge for the fashion industry and society at large. Bringing cellulosic textile waste, free of dyes and finishes, back to the soil is a circular solution for manufacturer textile offcuts and has the potential to provide organic matter to soil through a variety of amendments. This pilot studied the impacts of 100% cotton greige textile waste as a soil amendment, using cotton shred as a feedstock for creating cotton cover, cotton compost and cotton biochar soil amendments. The sweetie cherry tomato seed was used to grow 32 test plants and the team monitored plants for height, fruit quantity at harvest, aboveground biomass at harvest, soil health and plant tissue health against control plots in an urban farming facility.
description: Case Study Report: 
To actualize the United Nations Sustainable Development Goals by 2030, transferable
community- based circular solutions for food security and landfill reduction are needed. This project proposed to test the benefits of three variations of the same 100% cotton griege garment production textile waste as soil amendments to boost city soil quality supporting urban farming, in the quest for greater food security and waste reduction. In addition, the research was done with the intent that knowledge gained could be further tested for broader agricultural uses.
DOI: 10.5683/sp3/gjvvli
title: Replication Data and Code for: Reproduce to Validate: a Comprehensive Study on the Reproducibility of Economics Research

description: Journals have pushed for transparency of research through data availability policies. Such data policies improve availability of data and code, but what is the impact on reproducibility? We present results from a large reproduction exercise for articles published in the American Economic Journal: Applied Economics, which has had a data availability policy since its inception in 2009. This replication package contains all data and code to reproduce the tables in the paper. Please see the ReadMe file for additional details.
DOI: 10.5683/sp3/pargy4
title: Vascular plant community data for Northwest Territories, Canada

description: This record is for the dataset “Vascular plant community data for Northwest Territories, Canada” at &lt;a href= "https://doi.org/10.5061/dryad.76hdr7sth"&gt;https://doi.org/10.5061/dryad.76hdr7sth&lt;/a&gt;. 
&lt;p&gt;&lt;p&gt; 

Climate change is altering disturbance regimes outside of historical norms, which can impact biodiversity by selecting for plants with particular traits. The relative impact of disturbance characteristics on plant traits and community structure may be mediated by environmental gradients. We aimed to understand how wildfire impacted understory plant communities and plant regeneration strategies along gradients of environmental conditions and wildfire characteristics in boreal forests. We established 207 plots (60m2) in recently burned stands and 133 plots in mature stands with no recent fire history in comparable gradients of stand type, site moisture (drainage), and soil organic layer (SOL) depth in two ecozones in Canada’s Northwest Territories. At each plot, we recorded all vascular plant taxa in the understory and measured the regeneration strategy (seeder, resprouter, survivor) in burned plots, along with seedbed conditions (mineral soil and bryophyte cover). Dispersal, longevity, and growth form traits were determined for each taxon. Fire characteristics measured included proportion pre-fire SOL combusted (fire severity), date of burn (fire seasonality), and pre-fire stand age (time following fire). Results showed understory community composition was altered by fire. However, burned and mature stands had similar plant communities in wet sites with deep SOL. In the burned plots, regeneration strategies were determined by fire severity, drainage, and pre- and post-fire SOL depth. Resprouters were more common in wet sites with deeper SOL and lower fire severity, while seeders were associated with drier sites with thinner SOL and greater fire severity. This led to drier burned stands being compositionally different from their mature counterparts and seedbed conditions were important. Our study highlights the importance of environment-wildfire interactions in shaping plant regeneration strategies and patterns of understory plant community structure across landscapes, and the overriding importance of SOL depth and site drainage in mediating fire severity, plant regeneration, and community structure. &lt;p&gt;
This data can be downloaded at &lt;a href= "https://doi.org/10.5061/dryad.76hdr7sth"&gt;https://doi.org/10.5061/dryad.76hdr7sth&lt;/a&gt;
description: There are two versions of dataset. First version was published on 2022-05-24 and Second version was published on 2022-07-06
DOI: 10.5683/sp3/twbqe3
title: A coupled thermal-hydraulic-mechanical approach to modeling roadbed frost loading on water main failure

description: This record is for the dataset “A coupled thermal-hydraulic-mechanical approach to modeling roadbed frost loading on water main failure ” at &lt;a href= "https://doi/org/10.17632/7v27k4h4kr.2"&gt;https://doi/org/10.17632/7v27k4h4kr.2&lt;/a&gt;. 
&lt;p&gt;&lt;p&gt; 

This dataset includes input data for the thermal-hydraulic-mechanic model used in the manuscript entitled ''A coupled thermal-hydraulic-mechanical approach to modeling roadbed frost loading on water main failure'' by Huang, X., Rudolph, D., and Glass, B.&lt;p&gt;
This dataset can be downloaded at &lt;a href= "https://doi/org/10.17632/7v27k4h4kr.2"&gt;https://doi/org/10.17632/7v27k4h4kr.2&lt;/a&gt;
description: There are two Versions of dataset. First Version was published on 2021-07-30 with DOI:
https://doi.org/10.17632/7v27k4h4kr.1 Second Version was published on 2021-08-02 with DOI: https://doi/org/10.17632/7v27k4h4kr.2
DOI: 10.5683/sp3/voela6
title: Comparison of the fecal microbiota of adult healthy dogs fed a plant-based or an animal-based diet

description: Bacterial DNA was extracted from the feces of healthy adult dogs, and the V4 region of the 16s rRNA gene was amplified using PCR and sequenced on Illumina MiSeq. Sequences were processed using MUTHR and these datasets are the generated bacteria results we used to perform statistical analysis for both beta-diversity and alpha-diversity indices.
DOI: 10.5683/sp3/vcti9u
title: Supplemental Data: Perceived producer barriers to the implementation of best management practices for the transportation of lactating cull cows and control of Salmonella Dublin

description: A total of five focus groups involving 28 dairy farmer participants were held in Ontario, Canada from March 14 to April 14, 2023. Twenty-one (75%) participants identified as men and seven (25%) as women. On average, participants were 42 years old (median = 36, range = 20-79) and had 93 lactating cows on their farm (median = 80, range = 40-320). Eighty-two percent of farms (n = 23/28) were freestall, fourteen percent (n = 4/28) were tiestall, and four percent (n = 1/28) were compost-bedded pack.
DOI: 10.5683/sp3/pjozqa
title: TRree sap flow EXtractor (TREX) submission version

description: This record is for the dataset “TRree sap flow EXtractor (TREX) submission version” at &lt;a href= " https://doi.org/10.5281/zenodo.4121258 "&gt;https://doi.org/10.5281/zenodo.4121258&lt;/a&gt;. 

&lt;p&gt;&lt;p&gt; 

This release contains the first stable version of TREX, used for article and CRAN submissions. &lt;p&gt;
This dataset can be downloaded at &lt;a href= " https://doi.org/10.5281/zenodo.4121258 "&gt;https://doi.org/10.5281/zenodo.4121258&lt;/a&gt;
description: The second version of this dataset (TREX v1.0.1) includes: 
 minor fixes to timestamp handling,
new functionalities for sapwood allometry:
 a new dataset on sapwood characteristics for several North American species [1],
 see https://doi.org/10.5281/zenodo.6862864 and ?TREX::allometry.data.
 a new function predict_allometry() to predict sapwood area ($cm^2$), sapwood thickness ($cm$), and bark thickness ($cm$) from DBH for several North American species. 
 The sapwood allometry functionalities reflect novel research by Pappas et al. (2022) titled "Xylem porosity, sapwood characteristics, and uncertainties in temperate and boreal forest water use" (accepted in Agricultural and Forest Meteorology)
description: R
DOI: 10.15468/dl.eb9ajg
title: Occurrence Download

description: A dataset containing 3581 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is Europe",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Potamogeton crispus"
 ]
}

 The dataset includes 3581 records from 146 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046867-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5683/sp3/wohtlw
title: Multisensor ground-based measurements of the permafrost thaw subsidence in the Trail Valley Creek, NWT, Canada, 2015-2016

description: This record is for the dataset “Multisensor ground-based measurements of the permafrost thaw subsidence in the Trail Valley Creek, NWT, Canada, 2015-2016” at &lt;a href= "https://doi.org/10.1594/PANGAEA.888566"&gt;https://doi.org/10.1594/PANGAEA.888566&lt;/a&gt; 
&lt;p&gt;&lt;p&gt; 

The datasets were acquired at the Arctic tundra site of Trail Valley Creek (TVC), Northwest Territories, Canada, which is underlain by continuous permafrost. With the objective to quantify thaw/freeze dynamics of the ground over time, the two study sites (about 50x50 m each) were repeatedly captured in June 2015, August 2015, and August 2016 by terrestrial laser scanning (TLS) and by Real-Time Kinematic (RTK) Global Navigation Satellite System (GNSS) measurements. Additionally, 24 fiberglass poles were anchored deep in the permafrost and, therefore, assumed to be motionless. With these poles, surface displacement was estimated by measuring repeatedly the distance between ground surface and the top of the poles in June 2015, August 2015, July 2016, August 2016 and June 2017. Furthermore, thaw depths were measured around each fiberglass pole. Additionally, one-time GNSS measurements of the ground surface elevation were acquired at a number of points outside of the two study sites. &lt;p&gt;
This dataset can be downloaded at &lt;a href= "https://doi.org/10.1594/PANGAEA.888566"&gt;https://doi.org/10.1594/PANGAEA.888566&lt;/a&gt;
description: The dataset is a part of PermaSAR: Development of a Method to Detect Subsidence by Means of D-InSAR in Permafrost Regions Project
DOI: 10.15468/dl.4gs8hq
title: Occurrence Download

description: A dataset containing 3001344 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ardea ibis"
 ]
}

 The dataset includes 3001344 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046851-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5683/sp3/t1j6ez
title: Police Funding and Crime Rates in 20 of Canada's Largest Municipalities: A Longitudinal Study

description: To describe the current landscape of Canada's police funding, we collect and publish data on municipal police service expenditures from 2010 to 2021 in 20 of the most populous urban municipalities in Canada. Our analysis describes how police funding changes over time and varies between regions, and it examines its correlation with crime rates. Spending on police services is extracted from municipal budgets, and population and crime severity index data are collected from Statistics Canada databases.
DOI: 10.5683/sp3/ocw9c1
title: Replication Data for: The luxury effect in urban aquatic ecosystems: exploring drivers of change

description: This dataset contains replication data for estimating urban aquatic biodiversity and socioeconomic factors in the Greater Toronto Area. Aquatic biodiversity data was collected by the Toronto and Region Conservation Authority.
DOI: 10.5683/sp3/m8unnk
title: SharcBAIT virtual patient case series for AFMC CHEC library

description: A series of virtual patient cases, created for SharcFM (shared curriculum in family medicine), submitted to AFMC's Canadian Healthcare Education Commons (CHEC).
description: OpenLabyrinth, 3.5
description: Information about OLab4 is available at https://olab.ca

Information about OLab3 is available at https://openlabyrinth.ca
description: This zip file should contain a secondary zip file. The secondary zip file is Medbiq MVP formatted export of the scenario. It can be imported into an OLab4 or OpenLabyrinth v3 server for further editing on that server. If you do not see a zip file in this listing, the uploading author may have forgotten to create one. In this case, download all of the files that you see attached to this dataset and compress them into a single zip file, which you can then import into your OLab server.
description: README on what to do with these files
-----------------------------------------------

You have downloaded an OLab zip file. See the second zip file contained within this download. Extract it and save it as a single zip file so this can be imported into an existing OpenLabyrinth v3 or OLab4 server. You do not need to expand this second zip file -- the import process will expand the contents into the correct locations on the OLab server. 

What are OLab scenarios?
An OLab virtual scenario is a case or story, or it might be a wee test to challenge your learners. It might be a simple 3-step set of pages and questions. It might be a complex choose-your-own-adventure style of branching narrative. 

Why do I need an OLab server?
To simply play the original scenario, look at the metadata in the Dataverse that you downloaded this zip from. There will be a link to a playable version - for this, you only need a web browser. (No software download needed.) 

But if you want to be able to edit the scenario, examine how it was crafted or use it as a template on which to build a new one, you start with this zip file and import it into an OLab server. 

You will need an account on that OLab server that gives you author privileges. 

If you do not have an account, contact us using the contact information given in the metadata in the Dataverse. 

How do I import this scenario into an OLab server?
There are more detailed instructions available in the OLab User Guide. 
Briefly the steps are as follows:
1. Login to your OLab server as usual. 
2. Under the Labyrinths or Maps menu, click on Import
3. Tell the server which zip file to import.
4. It should only take a few seconds to import most zip files. More complex scenarios might take a couple of minutes at most. 
5. When imported, the scenario should appear in your list of Labyrinths or Maps.
DOI: 10.5683/sp3/l4gx7s
title: Geospatial dataset of abandoned oil/gas production wells in the United States: 2019-2020

description: Geospatial dataset of abandoned oil and gas well locations, plugging statuses, and well/fluid types compiled from United States open-access state databases.
description: Abandoned well data contained in these files was compiled from open source state/territorial repositories in 2019/2020, and reflects the degree of data availability at the time they were downloaded. Well types and plugging statuses were assigned to abandoned wells based on the available data in the original state database and may not be consistent throughout different states. Spatial coordinates may also not accurately reflect the true location of the abandoned well. The primary goal of the attached database was to provide a rough first estimate of total number and locations of abandoned oil/gas wells in the United States, and does not accurately represent well counts presented in the associated research article. No abandoned well coordinates were available for Iowa due to limited data availability. No state representatives were contacted throughout this process for confirmation of the the well statuses and well type categories.
DOI: 10.5683/sp3/uubgvk
title: Data for: Spillover effects of organic agriculture on pesticide use on nearby fields

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;&lt;span lang="EN"&gt;The environmental impacts of organic agriculture are only partially understood and &lt;/span&gt;&lt;span lang="EN"&gt;whether such practices have spillover effects &lt;/span&gt;&lt;span lang="EN"&gt;on pests or pest control activity &lt;/span&gt;&lt;span lang="EN"&gt;on nearby fields remains unknown&lt;/span&gt;&lt;span lang="EN"&gt;. Using &lt;/span&gt;&lt;span lang="EN"&gt;roughly 13,000 field observations per year from 2013-2019 in Kern County, CA , &lt;/span&gt;&lt;span lang="EN"&gt;we estimate that organic crop producers benefit from surrounding organic fields, decreasing overall pesticide use and pesticides targeting insect pests. &lt;/span&gt;&lt;span lang="EN"&gt;&lt;span lang="EN"&gt;Conventional fields, in contrast, tend to increase pesticide use as the area of surrounding organic production increases.&lt;/span&gt;&lt;/span&gt;&lt;/p&gt;
description: &lt;b&gt;Methods&lt;/b&gt;&lt;br /&gt;&lt;p&gt;Please see accompanying manuscript for details on data creation.&lt;/p&gt;
description: <b>Dryad version number:</b> 7
<b>Version status:</b> submitted
<b>Dryad curation status:</b> Published
<b>Sharing link:</b> http://datadryad.org/stash/dataset/doi:10.5061/dryad.vhhmgqp1f
<b>Storage size:</b> 2337188734
<b>Visibility:</b> public
DOI: 10.5683/sp3/xo7bvv
title: Repeatability of RRate measurements in children during triage in two Ugandan hospitals

description: &lt;br /&gt;&lt;strong&gt;Background:&lt;/strong&gt; Pneumonia is the leading cause of death in children globally. In low- and middle-income countries the diagnosis of pneumonia relies heavily on an accurate assessment of respiratory rate, which can be unreliable in nurses and clinicians with less advanced training. In order to inform more accurate measurements, we investigate the repeatability of the RRate app used by nurses in district hospitals in Uganda. 
&lt;br/&gt;
&lt;br /&gt;&lt;strong&gt;Methods:&lt;/strong&gt; This planned secondary analysis included 3679 children aged 0-5 years. The dataset had two sequential measurements of respiratory rate using the RRate app. We measured the agreement between respiratory rate observations and clustering around fixed thresholds defined by WHO for fast breathing, which are 60 breaths per minute (bpm) for under two months (Age-1), 50 bpm for two to 12 months (Age-2), and 40 bpm for 12.1 to 60 months (Age-3). We then assessed the repeatability of the paired measurements using the Intraclass Correlation Coefficient (ICC). 
&lt;br/&gt;
&lt;br /&gt;&lt;strong&gt;Results:&lt;/strong&gt; The respiratory rate measurement took less than 15 seconds for 7,277 (98.9%) of the measurements. Despite respiratory rates clustering around the WHO fast-breathing thresholds, the breathing classification based on the thresholds was changed in only 12.6% of children. The mean (SD) respiratory rate by age group was 60 (13.1) bpm for Age-1, 49 (11.9) bpm for Age-2, and 38 (10.1) for Age-3, and the bias (Limits of Agreements) were 0.3 (-10.8 – 11.3), 0.4 (-8.5 – 9.3), and 0.1 (-6.8, 7.0) for Age-1, Age-2, and Age-3 respectively. Most importantly, the repeatability of the two respiratory rate measurements for the 3,679 children was high, with an ICC value (95% CI) of 0.95 (0.94 – 0.95). 
&lt;br/&gt;
&lt;br /&gt;&lt;strong&gt;Discussion:&lt;/strong&gt; The RRate measurements were both efficient and repeatable. The simplicity, repeatability, and efficiency of the RRate app used by healthcare workers in LMICs supports more widespread adoption for clinical use.
&lt;br/&gt;
description: &lt;br /&gt;&lt;strong&gt;NOTE for restricted files:&lt;/strong&gt; If you are not yet a CoLab member, please complete our &lt;a href = "https://rc.bcchr.ca/redcap/surveys/?s=EDCYL7AC79"&gt;membership application survey&lt;/a&gt; to gain access to restricted files within 2 business days.
&lt;br /&gt;Some files may remain restricted to CoLab members. These files are deemed more sensitive by the file owner and are meant to be shared on a case-by-case basis. Please contact the CoLab coordinator at &lt;a href = mailto:sepsiscolab@bccchr.ca&gt;sepsiscolab@bcchr.ca&lt;/a&gt; or visit our &lt;a href = "https://wfpiccs.org/pediatric-sepsis-colab/"&gt;website&lt;/a&gt;.
DOI: 10.21227/v6mb-ez50
title: "Mal Netminer Dataset"

description: "The Mal-Netminer dataset consists of malware samples and their corresponding system call graphs used to analyze behavioral patterns through social network analysis (SNA). The dataset was developed as part of the Mal-Netminer framework, which classifies malware by extracting topological properties from system call graphs rather than relying on traditional signature or frequency-based approaches.To build the dataset, system call sequences were collected from malware using dynamic analysis tools, then transformed into directed graphs where nodes represent system calls and edges represent execution order. From these graphs, SNA metrics\u2014including degree distribution, in\/out-degree centrality, weighted degree measures, and average distance\u2014were extracted."