cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6950927
title: Collection of wing images for conservation of honey bees (Apis mellifera) biodiversity in Europe

description: Identification of honey bee (Apis mellifera) from various parts of the world is essential for protection of their biodiversity. The identification can be based on wing measurements which is inexpensive and easy available. In order to develop such identification there are required reference samples from various parts or the world.


We provide collection of 26481 honey bee fore wing images from 13 countries in Europe: Austria (AT), Croatia (HR), Greece (GR), Moldova (MD), Montenegro (ME), Poland (PL), Portugal (PT), Romania (RO), Serbia (RS), Slovenia (SI), Spain (ES), Turkey (TR). For each country there are three files starting with the two letter country code (indicated earlier in the parentheses): XX-wing-images.zip, XX-raw-coordinates.csv and XX-data.csv, which contain wing images, raw landmark coordinates and geographic coordinates, respectively. Files with prefix EU contain combined data from all countries.


The resolution of the wing images was provided in pixels per meter. If the resolution was not provided it is not known. In those cases only wing shape and not wing size can be analyzed. 


For analysis of the dataset see:


Oleksa, A., Căuia, E., Siceanu, A., Puškadija, Z., Kovačić, M., Pinto, M. A., Rodrigues, P. J., Hatjina, F., Charistos, L., Bouga, M., Prešern, J., Kandemir, İ., Rašić, S., Kusza, S., Tofilski, A. (2023). Honey bee (Apis mellifera) wing images: a tool for identification and conservation. GigaScience, 12, giad019. https://doi.org/10.1093/gigascience/giad019


Oleksa, A., Căuia, E., Siceanu, A., Puškadija, Z., Kovačić, M., Pinto, M. A., Rodrigues, P. J., Hatjina, F., Charistos, L., Bouga, M., Prešern, J., Kandemir, I., Rašić, S., Kusza, S., Tofilski, A. (2023). Apis-wings-EU. WorkflowHub. https://doi.org/10.48546/WORKFLOWHUB.WORKFLOW.422.1
description: Acknowledgements
Some samples from Poland were obtained within the framework of a project funded by the State Forests, "Pszczoły wracają do lasu" (Bees Return to the Forest), coordinated by Dr Kazimierz Szabla. Samples from Croatia were obtained during the project "Biodiversity of the honey bee (Apis mellifera carnica) population in the Republic of Croatia (BioBeeCro)" funded by the Paying Agency for Agriculture, Fisheries and Rural Development. Bernadeta Rzeźnicka assisted with the wing measurements. 
This research was funded in part by the National Science Centre, Poland, grant numbers 2021/41/B/NZ9/03153 and 2015/19/B/NZ9/03718. M. Alice Pinto acknowledges Fundação para a Ciência e a Tecnologia for providing financial support from national funds (FCT/MCTES) to CIMO (UIDB/00690/2020 and UIDP/00690/2020) and SusTEC (LA/P/0007/2021).
DOI: 10.5281/zenodo.6950928
title: Collection of wing images for conservation of honey bees (Apis mellifera) biodiversity in Europe

description: Identification of honey bee (<em>Apis mellifera</em>) from various parts of the world is essential for protection of their biodiversity. The identification can be based on wing measurements which is inexpensive and easy available. In order to develop such identification there are required reference samples from various parts or the world. We provide collection of 26481 honey bee fore wing images from 13 countries in Europe: Austria (AT), Croatia (HR), Greece (GR), Moldova (MD), Montenegro (ME), Poland (PL), Portugal (PT), Romania (RO), Serbia (RS), Slovenia (SI), Spain (ES), Turkey (TR). For each of the country there are three files starting with the two letter country code (indicated earlier in the parentheses): XX-wing-images.zip, XX-raw-coordinates.csv and XX-data.csv, which contain wing images, raw landmark coordinates and geographic coordinates, respectively.
description: This research was funded in part by National Science Centre, Poland, grant number: 2021/41/B/NZ9/03153. This research was funded in part by National Science Centre, Poland, grant number: 2015/19/B/NZ9/03718.
DOI: 10.15468/dl.eu6x3h
title: Occurrence Download

description: A dataset containing 325 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Scleria iostephana Nelmes",
 "Continent is Africa"
 ]
}

 The dataset includes 325 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002308-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.22na33
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "GadmGid is IDN.31_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Syzygium aqueum (Burm.fil.) Alston"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002309-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dsu662
title: Occurrence Download

description: A dataset containing 1318 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Tragopan temminckii (J.E.Gray, 1831)"
 ]
}

 The dataset includes 1318 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002310-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.scnrun
title: Occurrence Download

description: A dataset containing 467 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Romerolagus diazi (Ferrari-Pérez, 1893)"
 ]
}

 The dataset includes 467 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002311-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2fzauc
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Madagascar",
 "TaxonKey is Aythya innotata (Salvadori, 1894)"
 ]
}

 The dataset includes 129 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002313-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gke6sb
title: Occurrence Download

description: A dataset containing 9524 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Phylogenomics and the rise of the angiosperms"
 ]
}

 The dataset includes 9524 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002314-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w7z966
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Setaria atrata Hack.",
 "Continent is Africa"
 ]
}

 The dataset includes 40 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002315-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dyx3ru
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Striga klingii, Striga klingii Skan, Striga klingii Skan, Striga klingii Skan, 1906, Striga klingii (Engl.) Skan, Striga klingii (Engl.) Skan, Striga klingii (Engl.) Skan, Striga klingii (Engl.) Skan, Striga klingii (Engl.) Skan, Striga klingii (Engl.) Skan, Striga klingii (Engl.) Skan, Buchnera klingii Engl., Buchnera klingii Engl., Buchnera klingii Engl., Buchnera klingii Engl., Buchnera klingii Engl., Buchnera klingii Engl.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 55 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002316-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4yn2xp
title: Occurrence Download

description: A dataset containing 830 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Setaria homonyma (Steud.) Chiov.",
 "Continent is Africa"
 ]
}

 The dataset includes 830 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002318-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27635103
title: Coming Home: How visually navigating ants pinpoint their nest

description: Visually navigating <i>Myrmecia</i> foragers approach their nest from distances up to 25 m along well-directed paths, even from locations they have never been before (Narendra et al. 2013). However, close to the nest, they often spend some time pinpointing the nest entrance, sometimes missing it by centimetres. Here I investigate, what guides homing ants in their attempt to pinpoint the nest entrance. As the ants approach the nest, their behaviour changes. At about 1m from the nest the ants slow down, their scanning amplitude becomes larger and their path direction changes more frequently. This change in scanning behaviour is not triggered by local olfactory, tactile or visual cues because ants tethered on a trackball 30-50 cm above ground also exhibit it at 0.6 m compared to 1.6 m distance from the nest<i>.</i> Moreover, the ants are able to pinpoint the nest when such local cues are removed by covering the ground around the nest or the nest entrance itself. <i>Myrmecia </i>ants thus rely on information from the global panorama when pinpointing the nest. During learning walks, these ants appear to systematically collect’ views directed toward and away from the nest (Jayatilaka et al. 2018). Homing ants indeed change gaze and body axis direction appropriately with a delay when encountering views to the left or to the right of the nest. Image analysis shows, however, that close to the nest, opponent views with the same orientation become too similar, explaining the growing uncertainty reflected in the ants’ increased scanning behaviour during homing.
DOI: 10.6084/m9.figshare.27635103.v1
title: Coming Home: How visually navigating ants pinpoint their nest

description: Visually navigating <i>Myrmecia</i> foragers approach their nest from distances up to 25 m along well-directed paths, even from locations they have never been before (Narendra et al. 2013). However, close to the nest, they often spend some time pinpointing the nest entrance, sometimes missing it by centimetres. Here I investigate, what guides homing ants in their attempt to pinpoint the nest entrance. As the ants approach the nest, their behaviour changes. At about 1m from the nest the ants slow down, their scanning amplitude becomes larger and their path direction changes more frequently. This change in scanning behaviour is not triggered by local olfactory, tactile or visual cues because ants tethered on a trackball 30-50 cm above ground also exhibit it at 0.6 m compared to 1.6 m distance from the nest<i>.</i> Moreover, the ants are able to pinpoint the nest when such local cues are removed by covering the ground around the nest or the nest entrance itself. <i>Myrmecia </i>ants thus rely on information from the global panorama when pinpointing the nest. During learning walks, these ants appear to systematically collect’ views directed toward and away from the nest (Jayatilaka et al. 2018). Homing ants indeed change gaze and body axis direction appropriately with a delay when encountering views to the left or to the right of the nest. Image analysis shows, however, that close to the nest, opponent views with the same orientation become too similar, explaining the growing uncertainty reflected in the ants’ increased scanning behaviour during homing.
DOI: 10.15468/dl.57a4y3
title: Occurrence Download

description: A dataset containing 1069 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Salix matsudana Koidz."
 ]
}

 The dataset includes 1069 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002319-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9h3hg4
title: Occurrence Download

description: A dataset containing 994 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Setaria incrassata (Hochst.) Hack.",
 "Continent is Africa"
 ]
}

 The dataset includes 994 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002320-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.777v2r
title: Occurrence Download

description: A dataset containing 425 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Setaria lindenbergiana (Nees) Stapf",
 "Continent is Africa"
 ]
}

 The dataset includes 425 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002323-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ntggv2
title: Occurrence Download

description: A dataset containing 11221 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Spain, Portugal, Andorra, France, Italy, Switzerland, Luxembourg, Belgium, Netherlands)",
 "Geometry POLYGON((-3.47538 53.32785,-15.11672 42.14756,-3.01433 29.92991,20.03782 32.69617,20.84465 49.17847,4.93866 56.09411,-3.47538 53.32785))",
 "TaxonKey is Oryctes Hellwig, 1798"
 ]
}

 The dataset includes 11221 records from 464 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002321-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sua5z7
title: Occurrence Download

description: A dataset containing 841 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Setaria longiseta P.Beauv.",
 "Continent is Africa"
 ]
}

 The dataset includes 841 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002324-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27635634
title: Partner Satisfaction in Vaginoplasty Patients.

description: <b>Introduction: </b>In recent years, due to the increasing demand, genital aesthetic surgeries, particularly vaginoplasty, have become commonly preferred by women. However, data on the effects of this operation on male sexuality are limited. In recent years, societal awareness of sexual compatibility between partners and the surgical interventions that can be performed on the genital area to improve this compatibility has increased. This study aimed to demonstrate changes in partner satisfaction before and after vaginoplasty performed for aesthetic or medical reasons.<br><b>Materials and Methods:</b> This study was planned retrospectively. Patient information was screened from our clinic's database, and demographic data were recorded. The partners of patients who underwent vaginoplasty were interviewed to assess their sexual functions using the Male Sexual Health Questionnaire-Ejaculation Disorder (MSHQ-EjD), the Golombok Rust Sexual Satisfaction Scale, and the New Sexual Satisfaction Scale (NSSS). These assessments were conducted in the preoperative and postoperative periods, and the data were recorded.<br><b>Results:</b> In this study, it was observed that there were no significant differences in MSHQ ejaculation function and ejaculation difficulty levels between the preoperative and postoperative periods. The Golombok Rust Sexual Satisfaction Scale assessed the quality of the relationship in eight subgroups, finding that levels of Frequency, Communication, Touching, Satisfaction, Impotence, and Quality of Sexual Intercourse were significantly higher postoperatively, while scores for Avoidance and Premature Ejaculation were significantly lower.<b>Conclusions:</b> This study found that sexual satisfaction increased in the partners of women who underwent vaginoplasty for aesthetic or medical reasons.
DOI: 10.15468/dl.jdsesc
title: Occurrence Download

description: A dataset containing 2958 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Setaria megaphylla (Steud.) T.Durand & Schinz",
 "Continent is Africa"
 ]
}

 The dataset includes 2958 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002325-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13308777
title: Understanding How Feature Dependent Variables Affect Configurable System Comprehensibility

description: Background: #ifdefs allow developers to define source code related to features that should or should not be compiled. A feature dependency occurs in a configurable system when source code snippets of different features share code elements, such as variables. Variables that produce feature dependency are called dependent variables. The dependency between two features may include just one dependent variable or more than one. It is reasonable to suspect that a high number of dependent variables and their use make the analysis of variability scenarios more complex. In fact, previous studies show that #ifdefs may affect comprehensibility, especially when their use implies feature dependency. Aims: In this sense, our goal is to understand how feature dependent variables affect the comprehensibility of configurable system source code. We conducted two complementary empirical studies. In Study 1, we evaluate if the comprehensibility of configurable system source code varies according to the number of dependent variables. Testing this hypothesis is important so that we can recommend practitioners and researchers the extent to which writing #ifdef code with dependencies is harmful. In study 2, we carried out an experiment in which developers analyzed programs with different degrees of variability. Our results show that the degree of variability did not affect the comprehensibility of programs with feature dependent variables. Method: We executed a controlled experiment with 12 participants who analyzed programs trying to specify their output. We quantified comprehensibility using metrics based on time and attempts to answer tasks correctly, participants’ visual effort, and participants' heart rate. Results: Our results indicate that the higher the number of dependent variables the more difficult it was to understand programs with feature dependency. Conclusions: In practice, our results indicate that comprehensibility is more negatively affected in programs with higher number of dependent variables and when these variables are defined at a point far from the points where they are used.
DOI: 10.5281/zenodo.13308778
title: Understanding How Feature Dependent Variables Affect Configurable System Comprehensibility

description: Background: #ifdefs allow developers to define source code related to features that should or should not be compiled. A feature dependency occurs in a configurable system when source code snippets of different features share code elements, such as variables. Variables that produce feature dependency are called dependent variables. The dependency between two features may include just one dependent variable or more than one. It is reasonable to suspect that a high number of dependent variables and their use make the analysis of variability scenarios more complex. In fact, previous studies show that #ifdefs may affect comprehensibility, especially when their use implies feature dependency. Aims: In this sense, our goal is to understand how feature dependent variables affect the comprehensibility of configurable system source code. We conducted two complementary empirical studies. In Study 1, we evaluate if the comprehensibility of configurable system source code varies according to the number of dependent variables. Testing this hypothesis is important so that we can recommend practitioners and researchers the extent to which writing #ifdef code with dependencies is harmful. In study 2, we carried out an experiment in which developers analyzed programs with different degrees of variability. Our results show that the degree of variability did not affect the comprehensibility of programs with feature dependent variables. Method: We executed a controlled experiment with 12 participants who analyzed programs trying to specify their output. We quantified comprehensibility using metrics based on time and attempts to answer tasks correctly, participants’ visual effort, and participants' heart rate. Results: Our results indicate that the higher the number of dependent variables the more difficult it was to understand programs with feature dependency. Conclusions: In practice, our results indicate that comprehensibility is more negatively affected in programs with higher number of dependent variables and when these variables are defined at a point far from the points where they are used.
DOI: 10.5281/zenodo.13308783
title: EvANI

description: A benchmarking dataset for evaluating methods that calculate genomic distances e.g. average nuecluetide identity (ANI).
DOI: 10.5281/zenodo.13308784
title: EvANI

description: A benchmarking dataset for evaluating methods that calculate genomic distances e.g. average nuecluetide identity (ANI).
DOI: 10.34740/kaggle/dsv/9161528
title: Cooking Indian Dishes
DOI: 10.15468/dl.wyemgz
title: Occurrence Download

description: A dataset containing 2161 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyanocorax dickeyi R.T.Moore, 1935"
 ]
}

 The dataset includes 2161 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063264-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pujdff
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Epidendrum colombianum A.D.Hawkes"
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063265-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.8247918
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by David P. Shorthouse, https://orcid.org/0000-0001-7618-5230. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.