cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6374507
title: Taxonomic revision of Chinemys pani (Testudines: Geoemydidae) from the Pleistocene of Taiwan and its implications of conservation paleobiology

description: Proper taxonomic identification is critical to our understanding of biodiversity and the underlying evolutionary history. Here we re-examine the cast of the holotype of <em>Chinemys pani</em>, a geoemydid turtle from the Pleistocene of Taiwan; the actual specimen was not curated appropriately after the original publication and was most likely lost. Our results provide substantial evidence to show that <em>Chinemys pani</em>should be identified as <em>Mauremys reevesii</em>. The replica, though not ideal, preserves various morphological features that allow reliable taxonomic identification to <em>Mauremys reevesii</em>, including the presence of three longitudinal keels on the carapace, the second to sixth neural bones anteriorly short-sided, the lack of movable plastral hinge. In addition, we also confirm that the original diagnostic features that established the new taxon: <em>Chinemys pani</em>– are polymorphic characters of <em>Mauremys reevesii</em>. Our taxonomic revision of a Pleistocene geoemydid turtle from Taiwan resolves the debate on whether <em>Mauremys reevesii</em>should be a native turtle in Taiwan instead of an introduced invasive species. More importantly, this study offers new insights into the origin of modern biodiversity in Taiwan and gives a straightforward example of how fossils can be applied to conservation policies.Proper taxonomic identification is critical to our understanding of biodiversity and the underlying evolutionary history. Here we re-examine the cast of the holotype of <em>Chinemys pani</em>, a geoemydid turtle from the Pleistocene of Taiwan; the actual specimen was not curated appropriately after the original publication and was most likely lost. Our results provide substantial evidence to show that <em>Chinemys pani</em>should be identified as <em>Mauremys reevesii</em>. The replica, though not ideal, preserves various morphological features that allow reliable taxonomic identification to <em>Mauremys reevesii</em>, including the presence of three longitudinal keels on the carapace, the second to sixth neural bones anteriorly short-sided, the lack of movable plastral hinge. In addition, we also confirm that the original diagnostic features that established the new taxon: <em>Chinemys pani</em>– are polymorphic characters of <em>Mauremys reevesii</em>. Our taxonomic revision of a Pleistocene geoemydid turtle from Taiwan resolves the debate on whether <em>Mauremys reevesii</em>should be a native turtle in Taiwan instead of an introduced invasive species. More importantly, this study offers new insights into the origin of modern biodiversity in Taiwan and gives a straightforward example of how fossils can be applied to conservation policies.
DOI: 10.6084/m9.figshare.19394723
title: Reference files for TE analysis (v1.1)

description: README - Transposable Element Differential Expression Analysis Protocol from RNA-seq Data###########################<br>Supplied reference files<br>- Reference genome sequence, predicted RNA sequences and genome annotations (GCA_014300015.1; 2020 genome) These files are publicly available at: https://www.ncbi.nlm.nih.gov/bioproject/PRJNA599375/ GCA_014300015.1_MPIA_NFZ_2.0_genomic.fna GCA_014300015.1_MPIA_NFZ_2.0_genomic.gtf GCA_014300015.1_MPIA_NFZ_2.0_rna_from_genomic.fna<br>- FishTEDB sequences for N. furzeri transposons This file can be obtained at: http://www.fishtedb.org/project/species-detail?species=Nothobranchius+furzeri Nothobranchius_furzeri_FishTEDB_TEs.fa<br>- Modified reference files including TE sequences/annotations for * kallisto/transcriptome based method: GCA_014300015.1_MPIA_NFZ_2.0_rna_from_genomic_WithFishTEDBv4.fasta<br> * STAR/genome based method: GCA_014300015.1_MPIA_NFZ_2.0_genomic.fna.masked GCA_014300015.1_MPIA_NFZ_2.0_gene_and_RepeatMasker_FishTEDB_annotations.gtf GCA_014300015.1_MPIA_NFZ_2.0_genomic.fna.out
DOI: 10.18170/dvn/ob0ipv
title: Chinese Hospital Management Intervention Experiment - Based on the World Management Survey (WMS)

description: The project applied the World Management Survey (WMS) and Management and Organizational Practice Survey (MOPS) methodology to investigate more than 600 nationally representative hospitals in China from 2014 to 2021. Consequently, we created a Chinese hospital management database to comprehensively and systematically analyze the positioning of the Chinese hospital management level in the world management coordinate system, the driving factors affecting the management level, and their relative importance.
DOI: 10.18170/dvn/lvpx7f
title: Health economic experimental for targeted poverty alleviation: An International Study in Sichuan Liangshan

description: Health behavior, health status and income of residents in Liangshan
DOI: 10.18170/dvn/ew5nge
title: Economic empirical study on the R﹠D costs of innovative drugs in China

description: It mainly collects information about the application for clinical trials or marketing of innovative drugs, with the purpose of estimating the transformation rate and cost of innovative drugs between clinical stages.
DOI: 10.6084/m9.figshare.14822232.v6
title: Parameters of a 24-bus distribution network

description: Parameters of a 24-bus distribution network
DOI: 10.6084/m9.figshare.15241017
title: Parameters of a 54-bus distribution network

description: Parameters of a 24-bus distribution network，only considering the case where some lines have faults (10), including parameters such as lines, transformers, substations, etc.
DOI: 10.6084/m9.figshare.14822232
title: Parameters of a 24-bus distribution network

description: Parameters of a 24-bus distribution network
DOI: 10.6084/m9.figshare.14822232.v8
title: Parameters of a 24-bus distribution network

description: Parameters of a 24-bus distribution network
DOI: 10.6084/m9.figshare.14822232.v7
title: Parameters of a 24-bus distribution network

description: Parameters of a 24-bus distribution network
DOI: 10.5281/zenodo.6374547
title: Dataset: An improved rearing method and artificial diet for greyback canegrubs (Dermolepida albohirtum, Coleoptera: Scarabaeidae).

description: This dataset was generated and analysed for a study aimed at developing a rearing method and artificial diet for greyback canegrubs (<em>Dermolepida albohirtum</em>, Coleoptera: Scarabaeidae). See the published study for more details on the methodology. <strong>Egg monitoring</strong> Excel spreadsheet. Information about <em>Dermolepida albohirtum</em> eggs and hatching rate. Eggs were laid by adult beetles in the laboratory. Eggs were kept in hatching chambers in small batches and stored in an incubator at 26°C, 75% humidity, and in the dark. Eggs hatched over several days (up to five days). <strong>Hatchling monitoring</strong> Excel spreadsheet. Information about <em>Dermolepida albohirtum </em>hatchlings and the date at which they hatched and developed into second instar in the laboratory. Hatchlings were fed pieces of carrots. <strong>Survival grubs on diet</strong> Excel spreadsheet. Information about <em>Dermolepida albohirtum </em>second instar larvae fed different diets or not fed in the laboratory for 18 days: survival, date at which they developed into third instar, date at which they died (if applicable). <strong>Weight of larvae on diet </strong> Excel spreadsheet. Weight of <em>Dermolepida albohirtum </em>larvae fed different diets or not fed in the laboratory for 18 days. <strong>Width of larvae on diet</strong> Excel spreadsheet. Width of <em>Dermolepida albohirtum </em>larvae fed different diets or not fed in the laboratory for 18 days. Larval width was measured as a straight line across the maximal width situated between the raster and the last spiracle. The measurements were taken from photographs and using ImageJ software (version 1.52a). <strong>Activity level of larvae on diet</strong> Excel spreadsheet. Activity level of <em>Dermolepida albohirtum </em>larvae fed different diets or not fed in the laboratory for 18 days. Larvae were observed at 30 seconds intervals for 10 minutes every 3 days (i.e., when new diet was added). We recorded when larvae started digging into the sand and when they were successfully buried at 30 seconds intervals for 10 minutes to determine their relative activity level. We also recorded the percentage of their body outside the substrate if they were not completely buried after 10 minutes. <strong>Diet uptake</strong> Excel spreadsheet. Diet uptake of <em>Dermolepida albohirtum </em>larvae fed different diets in the laboratory for 18 days. We calculated the amount of food source (diet PL1 or carrot) ingested by larvae by subtracting the initial diet weight with the weight of the remaining diet after three days (i.e., when new diet was added). These values were corrected by adding or subtracting the average proportion of diet or carrot weight change measured in controlled containers (i.e., carrots gained 11.2% of their weight on average and diet PL1 lost 1.9% of their weight in controlled conditions).
DOI: 10.5281/zenodo.6374546
title: Dataset: An improved rearing method and artificial diet for greyback canegrubs (Dermolepida albohirtum, Coleoptera: Scarabaeidae).

description: This dataset was generated and analysed for a study aimed at developing a rearing method and artificial diet for greyback canegrubs (<em>Dermolepida albohirtum</em>, Coleoptera: Scarabaeidae). See the published study for more details on the methodology. <strong>Egg monitoring</strong> Excel spreadsheet. Information about <em>Dermolepida albohirtum</em> eggs and hatching rate. Eggs were laid by adult beetles in the laboratory. Eggs were kept in hatching chambers in small batches and stored in an incubator at 26°C, 75% humidity, and in the dark. Eggs hatched over several days (up to five days). <strong>Hatchling monitoring</strong> Excel spreadsheet. Information about <em>Dermolepida albohirtum </em>hatchlings and the date at which they hatched and developed into second instar in the laboratory. Hatchlings were fed pieces of carrots. <strong>Survival grubs on diet</strong> Excel spreadsheet. Information about <em>Dermolepida albohirtum </em>second instar larvae fed different diets or not fed in the laboratory for 18 days: survival, date at which they developed into third instar, date at which they died (if applicable). <strong>Weight of larvae on diet </strong> Excel spreadsheet. Weight of <em>Dermolepida albohirtum </em>larvae fed different diets or not fed in the laboratory for 18 days. <strong>Width of larvae on diet</strong> Excel spreadsheet. Width of <em>Dermolepida albohirtum </em>larvae fed different diets or not fed in the laboratory for 18 days. Larval width was measured as a straight line across the maximal width situated between the raster and the last spiracle. The measurements were taken from photographs and using ImageJ software (version 1.52a). <strong>Activity level of larvae on diet</strong> Excel spreadsheet. Activity level of <em>Dermolepida albohirtum </em>larvae fed different diets or not fed in the laboratory for 18 days. Larvae were observed at 30 seconds intervals for 10 minutes every 3 days (i.e., when new diet was added). We recorded when larvae started digging into the sand and when they were successfully buried at 30 seconds intervals for 10 minutes to determine their relative activity level. We also recorded the percentage of their body outside the substrate if they were not completely buried after 10 minutes. <strong>Diet uptake</strong> Excel spreadsheet. Diet uptake of <em>Dermolepida albohirtum </em>larvae fed different diets in the laboratory for 18 days. We calculated the amount of food source (diet PL1 or carrot) ingested by larvae by subtracting the initial diet weight with the weight of the remaining diet after three days (i.e., when new diet was added). These values were corrected by adding or subtracting the average proportion of diet or carrot weight change measured in controlled containers (i.e., carrots gained 11.2% of their weight on average and diet PL1 lost 1.9% of their weight in controlled conditions).
DOI: 10.6084/m9.figshare.19207215.v1
title: De-identified interview transcripts and analyses

description: Interview transcripts and analysis for 'Recognizing the deterioration of patients in acute care wards: a qualitative study'
DOI: 10.15121/1855778
title: Utah FORGE Groundwater Levels: Updated March 2022

description: This Excel spreadsheet contains Utah FORGE groundwater data for wells WOW2 and WOW3. The data was updated on March 16th, 2022 and contains legacy data. Groundwater data includes the level, offset, date, and time for each measurement. Temperature, drift, water elevation and other parameters are recorded. Figures in the data include a water elevation over time plot. Legacy data ranges from year 1976 to 2019 and updated data ranges from year 2019 to 2021.
DOI: 10.6084/m9.figshare.19207215
title: De-identified interview transcripts and analysis

description: Interview transcripts and analysis for 'Recognising the deterioration of patients in acute care wards: a qualitative study' This information includes the de-identified transcripts, coding and themes from the emergent analysis.
DOI: 10.6084/m9.figshare.19207215.v2
title: De-identified interview transcripts and analyses

description: Interview transcripts and analysis for 'Recognizing the deterioration of patients in acute care wards: a qualitative study'
DOI: 10.21227/vz40-8702
title: Degradation state instance

description: This is a numerical example of parts deterioration monitoring constructed based on the literature "Preventive Maintenance and Joint Optimization of Spare Parts Inventory and Reservation Policy"
DOI: 10.6084/m9.figshare.19395059
title: Nutritional composition of pollen and rust spores

description: <sup>a</sup>Kiwifruit (<i>Actinidia chinensis</i>) pollen, <sup>b</sup>willow (<i>Salix babylonica</i>) pollen, <sup>c</sup><i>Austropuccinia psidii</i> (myrtle rust) spores, <sup>d</sup><i>Melampsora larici-populina </i>(poplar rust) spores in mg/100 g. *EAA required by the honey bee<sup>7</sup>. †Minimum value of EAA required<sup>7</sup>.<sup> </sup>“n/a” = not applicable.
DOI: 10.6084/m9.figshare.19395059.v2
title: Nutritional composition of pollen and rust spores

description: <sup>a</sup>Kiwifruit (<i>Actinidia chinensis</i>) pollen, <sup>b</sup>willow (<i>Salix babylonica</i>) pollen, <sup>c</sup><i>Austropuccinia psidii</i> (myrtle rust) spores, <sup>d</sup><i>Melampsora larici-populina </i>(poplar rust) spores in mg/100 g. *EAA required by the honey bee<sup>7</sup>. †Minimum value of EAA required<sup>7</sup>.<sup> </sup>“n/a” = not applicable.
DOI: 10.6084/m9.figshare.19395059.v1
title: Nutritional composition of pollen and rust spores

description: Nutritional composition, both the amino acid and crude protein, of Kiwifruit (<i>Actinidia chinensis</i>) pollen, willow (<i>Salix babylonica</i>) pollen, <i>Austropuccinia psidii</i> (myrtle rust) spores, <i>Melampsora larici-populina </i>(poplar rust) spores.
DOI: 10.6084/m9.figshare.19394132
title: Supporting data for "Heavy Precipitation Impacts on Nitrogen Loading to the Gulf of Mexico in the 21st Century: Model projections under future climate scenarios"

description: This datasets contains the supporting data for "Heavy Precipitation Impacts on Nitrogen Loading to the Gulf of Mexico in the 21st Century: Model projections under future climate scenarios" published in Earth's Future.<br>
DOI: 10.6084/m9.figshare.19394132.v2
title: Supporting data for "Heavy Precipitation Impacts on Nitrogen Loading to the Gulf of Mexico in the 21st Century: Model projections under future climate scenarios"

description: This datasets contains the supporting data for "Heavy Precipitation Impacts on Nitrogen Loading to the Gulf of Mexico in the 21st Century: Model projections under future climate scenarios" published in Earth's Future.<br>
DOI: 10.34740/kaggle/dsv/3337839
title: Our World in Data - COVID-19
DOI: 10.6084/m9.figshare.19395119
title: Dataset for qPCR, lipolysis, and adipokines secretion.

description: Dataset for qPCR, lipolysis, and adipokines secretion
DOI: 10.6084/m9.figshare.19395119.v1
title: Dataset for qPCR, lipolysis, and adipokines secretion.

description: Dataset for qPCR, lipolysis, and adipokines secretion
DOI: 10.5281/zenodo.6374622
title: dataset of ""

description: dataset
DOI: 10.5281/zenodo.6374621
title: dataset of ""

description: dataset
DOI: 10.5281/zenodo.6374584
title: A meteorology and snow dataset from adjacent forested and meadow sites at Crested Butte, CO, USA

description: This dataset contains meteorology and snow observation data collected at sites in the southwestern Colorado Rocky Mountains during water years 2019-2021. Data collection had an emphasis on paired open-forest sites and included three forested elevations. In total, we present 270 snow pit observations, 4,019 snow depth measurements, and three years of meteorological forcing from two weather stations (one in a meadow, the other in an adjacent forest). The dataset is described in a forthcoming publication of the same name: <em>A meteorology and snow dataset from adjacent forested and meadow sites at Crested Butte, CO, USA</em> (Bonner et al., 2022).
DOI: 10.34740/kaggle/dsv/3337972
title: COVID-19 AND SI
DOI: 10.6084/m9.figshare.19225209.v1
title: A Study on the Deep Electrical Structure of the North-South Gravity Lineament in Northeastern China

description: The nonlinear conjugate gradient inversion algorithm (NLCG; Rodi & Mackie, 2001) was used for the 2D inversion.
DOI: 10.5281/zenodo.6374636
title: abb0332_figure.zip

description: dataset
DOI: 10.5281/zenodo.6374635
title: abb0332_figure.zip

description: dataset
DOI: 10.34820/fk2/pvwsj0/uvmbze
title: e-nose_dataset_12_beef_cuts.tab

description: :unav
DOI: 10.34820/fk2/pvwsj0
title: Replication Data for: Dataset for electronic nose from various beef cuts

description: This dataset is originated from 12 type of beef cuts including round (shank), top sirloin, tenderloin, flap meat (flank), striploin (shortloin), brisket, clod/chuck, skirt meat (plate), inside/outside, rib eye, shin, and fat. The process of beef spoilage is recorded using 11 Metal-Oxide Semiconductor (MOS) gas sensors during 2220 minutes. The dataset is formatted in "xlsx" file. Each sheet represents one beef cut which is contained columns as follows: Minute: time in minute TVC: continuous label in the total viable count Label: discrete label, 1,2,3,4 denote “excellent”,”good”,”acceptable”, and “spoiled”, respectively. MQ_: the resistant value of gas sensors
DOI: 10.5281/zenodo.6360904
title: Quantitative Study of Diversity, Equity and Inclusion in STEM Subjects in US Universities

description: This is the complete raw data for the National Association of Scholars' 2022 Quantitative Study of Diversity, Equity and Inclusion in STEM Subjects in US Universities. It can be dropped into the project's root folder and used to recreate the files in the ./out directory, which are used to create the visualizations in the final report. The replication files for the project (processed data and code) are here: https://github.com/NASorg/quantdei Please note that it was necessary to split the data into multiple zip files in order to upload it to Zenodo. To get the files and replicate the analysis, these are the steps. 1. Download all the files and put them in a folder. Navigate to that folder in the command line. 2. Combine the files into a single zip file, like this: cat ./quantdei_nas_data.z0* ./quantdei_nas_data.zip &gt; ./data.zip 3. Unzip that amalgamated file: (gui tools won't work) unzip ./data.zip Congratulations! Now you should have a folder called "data" that has all of the data.
DOI: 10.5281/zenodo.6360903
title: Quantitative Study of Diversity, Equity and Inclusion in STEM Subjects in US Universities

description: This is the complete raw data for the National Association of Scholars' 2022 Quantitative Study of Diversity, Equity and Inclusion in STEM Subjects in US Universities. It can be dropped into the project's root folder and used to recreate the files in the ./out directory, which are used to create the visualizations in the final report. The replication files for the project (processed data and code) are here: https://github.com/NASorg/quantdei Please note that it was necessary to split the data into multiple zip files in order to upload it to Zenodo. To get the files and replicate the analysis, these are the steps. 1. Download all the files and put them in a folder. Navigate to that folder in the command line. 2. Combine the files into a single zip file, like this: cat ./quantdei_nas_data.z0* ./quantdei_nas_data.zip &gt; ./data.zip 3. Unzip that amalgamated file: (gui tools won't work) unzip ./data.zip Congratulations! Now you should have a folder called "data" that has all of the data.
DOI: 10.26182/4a2p-1367
title: Supplemental Materials for  Plasma lipoprotein subclass variation in middle-aged women and men associations with health and cardiometabolic risk. Authors Masuda R
DOI: 10.6084/m9.figshare.19393910
title: China_Mainland_SCK_Vs30.xlsx

description: Gridded <i>V</i><sub><i>S</i>30</sub> data estimated by SCK model for mainland China.
DOI: 10.25345/c5s17sx08
title: MassIVE MSV000089092 - Trem2 deletion enhances tau dispersion and pathology through microglia exosomes
title: Alzheimer's disease (AD) is a neurodegenerative disorder that manifests sequential AB and tau brain pathology with age-dependent onset. Variants in the microglial immune receptor TREM2 are associated with enhanced risk of onset in sporadic Alzheimer's disease (AD). While recent studies suggest TREM2 dysfunction can aggravate tau pathology, mechanisms underlying TREM2-dependent modulation of tau pathology remains elusive. Here, we characterized differences in progressive tau spreading from the medial entorhinal cortex (MEC) to the hippocampus in wildtype (WT) and Trem2 knockout (KO) mice by injection of AAV-P301L tau into the MEC, and correlated changes in hippocampal tau histopathology with spatial and fear memory. We also compared effects of intraneuronal dispersion between cultured microglia and neurons using a microfluidic dispersion assay, analyzed differences in microglial tau trafficking following uptake, and quantified exosomal tau secretion and pathogenicity from purified WT and Trem2 KO exosomes. Trem2 deletion in mice (Trem2 KO) can enhance tau spreading from the medial entorhinal cortex (MEC) to the hippocampus, which coincides with impaired synaptic function and memory behavior. Trem2 KO microglia enhances intraneuronal dispersion of tau in vitro between neuronal layers cultured in a microfluidic chamber, and the presence of exosome inhibitors can significantly reduce tau in exosomes and extracellular media from tau-loaded microglia. Microglial Trem2 deletion has no effect on tau uptake; however, Trem2 deletion enhances distribution to endosomal and cellular pre-exosomal compartments following internalization. Although Trem2 deletion has little or no effect on exosome size, proteomic analysis indicates that Trem2 deletion can modulate changes in the microglial proteomic landscape with LPS/ATP treatment conditions associated with exosome induction. Furthermore, exosomes from Trem2 KO microglia show elevated tau levels, and feature enhanced tau-seeding capacity in a tau FRET reporter line compared to exosomes form WT microglia. Together, these results indicate that Trem2 can normally suppress exosomal tau pathogenicity, and Trem2 deletion can enhance tau trafficking, distribution and seeding through microglial exosomes.
DOI: 10.34740/kaggle/dsv/3338295
title: COVID-19 AND SI