cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.11389876
title: CD4+ T cells re-wire granuloma cellularity and regulatory networks, promoting immunomodulation following Mtb reinfection

description: Here we include the necessary .ipynb, .h5ad, and .rds (used for cell-cell interaction analyses) files used in our work: "Immunomodulatory re-wiring of granuloma cellularity and regulatory networks by CD4 T cells following Mtb reinfection"
DOI: 10.5281/zenodo.11389877
title: CD4+ T cells re-wire granuloma cellularity and regulatory networks, promoting immunomodulation following Mtb reinfection

description: Here we include the necessary .ipynb, .h5ad, and .rds (used for cell-cell interaction analyses) files used in our work: "Immunomodulatory re-wiring of granuloma cellularity and regulatory networks by CD4 T cells following Mtb reinfection"
DOI: 10.6084/m9.figshare.21094564
title: Evaluation of limited-sampling strategies to calculate AUC(0-24) and the role of CYP3A5 in Chilean pediatric kidney recipients using extended-release Tacrolimus

description: Background: Kidney transplantation (KTx) requires immunosuppressive drugs such as Tacrolimus (TAC) which is mainly metabolized by CYP3A5. TAC is routinely monitored by trough levels (C0) although it has not shown to be a reliable marker. The area-under-curve (AUC) is a more realistic measure of drug exposure, but sampling is challenging in pediatric patients. Limited-sampling strategies (LSS) have been developed to estimate AUC. Herein, we aimed to determine AUC(0-24) and CYP3A5 genotype in Chilean pediatric kidney recipients using extended-release TAC, to evaluate different LSS-AUC(0-24) formulas and dose requirements. Patients and methods: We analyzed pediatric kidney recipients using different extended-release TAC brands to determine their trapezoidal AUC(0-24) and CYP3A5 genotypes (SNP rs776746). Daily TAC dose (TAC-D mg/kg) and AUC(0-24) normalized by dose were compared between CYP3A5 expressors (*1/*1 and *1/*3) and non-expressors (*3/*3). We evaluated the single and combined time-points to identify the best LSS-AUC(0-24) model. We compared the performance of this model with two pediatric LSS-AUC(0-24) equations for clinical validation. Results: Fifty-one pharmacokinetic profiles were obtained from kidney recipients (age 13.1 ± 2.9 years). When normalizing AUC(0-24) by TAC-D significant differences were found between CYP3A5 expressors and non-expressors (1701.9 vs. 2718.1 ng*h/mL/mg/kg, p &lt; 0.05). C0 had a poor fit with AUC(0-24) (r 2 = 0.5011). The model which included C0, C1 and C4, showed the best performance to predict LSS-AUC(0-24) (r 2 = 0.8765) and yielded the lowest precision error (7.1% ± 6.4%) with the lowest fraction (9.8%) of deviated AUC(0-24), in comparison to other LSS equations. Conclusion: Estimation of LSS-AUC(0-24) with 3 time-points is an advisable and clinically useful option for pediatric kidney recipients using extended-release TAC to provide better guidance of decisions if toxicity or drug inefficacy is suspected. The different CYP3A5 genotypes associated with variable dose requirements reinforce considering genotyping before KTx. Further multi-centric studies with admixed cohorts are needed to determine the short- and long-term clinical benefits.
DOI: 10.6084/m9.figshare.21094564.v1
title: Evaluation of limited-sampling strategies to calculate AUC(0-24) and the role of CYP3A5 in Chilean pediatric kidney recipients using extended-release Tacrolimus

description: Background: Kidney transplantation (KTx) requires immunosuppressive drugs such as Tacrolimus (TAC) which is mainly metabolized by CYP3A5. TAC is routinely monitored by trough levels (C0) although it has not shown to be a reliable marker. The area-under-curve (AUC) is a more realistic measure of drug exposure, but sampling is challenging in pediatric patients. Limited-sampling strategies (LSS) have been developed to estimate AUC. Herein, we aimed to determine AUC(0-24) and CYP3A5 genotype in Chilean pediatric kidney recipients using extended-release TAC, to evaluate different LSS-AUC(0-24) formulas and dose requirements. Patients and methods: We analyzed pediatric kidney recipients using different extended-release TAC brands to determine their trapezoidal AUC(0-24) and CYP3A5 genotypes (SNP rs776746). Daily TAC dose (TAC-D mg/kg) and AUC(0-24) normalized by dose were compared between CYP3A5 expressors (*1/*1 and *1/*3) and non-expressors (*3/*3). We evaluated the single and combined time-points to identify the best LSS-AUC(0-24) model. We compared the performance of this model with two pediatric LSS-AUC(0-24) equations for clinical validation. Results: Fifty-one pharmacokinetic profiles were obtained from kidney recipients (age 13.1 ± 2.9 years). When normalizing AUC(0-24) by TAC-D significant differences were found between CYP3A5 expressors and non-expressors (1701.9 vs. 2718.1 ng*h/mL/mg/kg, p &lt; 0.05). C0 had a poor fit with AUC(0-24) (r 2 = 0.5011). The model which included C0, C1 and C4, showed the best performance to predict LSS-AUC(0-24) (r 2 = 0.8765) and yielded the lowest precision error (7.1% ± 6.4%) with the lowest fraction (9.8%) of deviated AUC(0-24), in comparison to other LSS equations. Conclusion: Estimation of LSS-AUC(0-24) with 3 time-points is an advisable and clinically useful option for pediatric kidney recipients using extended-release TAC to provide better guidance of decisions if toxicity or drug inefficacy is suspected. The different CYP3A5 genotypes associated with variable dose requirements reinforce considering genotyping before KTx. Further multi-centric studies with admixed cohorts are needed to determine the short- and long-term clinical benefits.
DOI: 10.25502/zbzm-5950/d
title: Market Intelligence Data on Plantain in Ghana – preferences from sucker producers
DOI: 10.5281/zenodo.11111112
title: Data for "HSTPROMO Internal Proper Motion Kinematics of Dwarf Spheroidal Galaxies: I. Velocity Anisotropy and Dark Matter Cusp Slope of Draco"

description: DATA FOR:

HSTPROMO Internal Proper Motion Kinematics of Dwarf Spheroidal Galaxies: I. Velocity Anisotropy and Dark Matter Cusp Slope of Draco

THE PUBLIC FILES THAT ARE SHARED HERE ARE:

1. DRACO_STARS: This file contains measured proper motions, uncertainties and respective instrumental magnitudes of stars with proper motion uncertainties smaller than Draco's intrinsic velocity dispersion. The detailed explanation of this dataset is given in Vitral et al. (2024, Section 2.3.5).2. DRACO_BINS: This file corresponds to the data points in Figure 11 from Vitral et al. (2024), corresponding to 3D velocity dispersion profiles and respective line-of-sight rotation curve from Draco.3. DRACO_LOS: This file contains the field "OBJ_ID" from the line-of-sight catalog from Walker et al. (2023) concerning the stars retained for internal mass-modeling in Vitral et al. (2024).

Please read the "Notes" section of each file for further information.

Please cite the following papers when using these catalogs:

- Vitral et al. (2024), ApJ, DOI: 10.3847/1538-4357/ad571c- Walker et al. (2023), ApJS, 268, 19, DOI: 10.3847/1538-4365/acdd79
DOI: 10.5281/zenodo.11111113
title: Data for "HSTPROMO Internal Proper Motion Kinematics of Dwarf Spheroidal Galaxies: I. Velocity Anisotropy and Dark Matter Cusp Slope of Draco"

description: DATA FOR:

HSTPROMO Internal Proper Motion Kinematics of Dwarf Spheroidal Galaxies: I. Velocity Anisotropy and Dark Matter Cusp Slope of Draco

THE PUBLIC FILES THAT ARE SHARED HERE ARE:

1. DRACO_STARS: This file contains measured proper motions, uncertainties and respective instrumental magnitudes of stars with proper motion uncertainties smaller than Draco's intrinsic velocity dispersion. The detailed explanation of this dataset is given in Vitral et al. (2024, Section 2.3.5).2. DRACO_BINS: This file corresponds to the data points in Figure 11 from Vitral et al. (2024), corresponding to 3D velocity dispersion profiles and respective line-of-sight rotation curve from Draco.3. DRACO_LOS: This file contains the field "OBJ_ID" from the line-of-sight catalog from Walker et al. (2023) concerning the stars retained for internal mass-modeling in Vitral et al. (2024).

Please read the "Notes" section of each file for further information.

Please cite the following papers when using these catalogs:

- Vitral et al. (2024), ApJ, DOI: 10.3847/1538-4357/ad571c- Walker et al. (2023), ApJS, 268, 19, DOI: 10.3847/1538-4365/acdd79
DOI: 10.5281/zenodo.12155714
title: Statistical analysis flumequine as a fluoroquinolone

description: This repository is containing the datasets with statistical analysis of the paper: "Flumeqiune, fluoroqiunolone in disguise."

Sample size calculation with CRITSize



R-file: Calculation of swabs


Long term exposure experiment



R-file: Correlation between resistance and treatment long term exposure

XLSX-file: Treatment flumequine, Treatment enrofloxacin


Fermentation analysis



one R-file: Fermentation experiment

one CSV-files: Treatment flumequine, Treatment enrofloxacin


Therapeutic concentration of flumequine analysis



one R-file: Flumequine field study

one CSV-files: Flumequine field study
DOI: 10.5281/zenodo.12155715
title: Statistical analysis flumequine as a fluoroquinolone

description: This repository is containing the datasets with statistical analysis of the paper: "Flumeqiune, fluoroqiunolone in disguise."

Sample size calculation with CRITSize



R-file: Calculation of swabs


Long term exposure experiment



R-file: Correlation between resistance and treatment long term exposure

XLSX-file: Treatment flumequine, Treatment enrofloxacin


Fermentation analysis



one R-file: Fermentation experiment

one CSV-files: Treatment flumequine, Treatment enrofloxacin


Therapeutic concentration of flumequine analysis



one R-file: Flumequine field study

one CSV-files: Flumequine field study
DOI: 10.5281/zenodo.12731328
title: Data of experiments for "A Spatially Layered DNA Disk for Data Storage"

description: Data generated or analyzed during our experiments on DNA disk. The first color film “Becky Sharp” (53.59 MB) was encoded into ~10.08 million DNA strands. Simultaneous sequencing and real-time readout were achieved. (Given the value of this film as the first color film, it’s only used to verify the performance of the proposed DNA storage method and does not contain the specific content. Therefore, there are no copyright issues involved.)
DOI: 10.5281/zenodo.12731329
title: Data of experiments for "A Spatially Layered DNA Disk for Data Storage"

description: Data generated or analyzed during our experiments on DNA disk. The first color film “Becky Sharp” (53.59 MB) was encoded into ~10.08 million DNA strands. Simultaneous sequencing and real-time readout were achieved. (Given the value of this film as the first color film, it’s only used to verify the performance of the proposed DNA storage method and does not contain the specific content. Therefore, there are no copyright issues involved.)
DOI: 10.34740/kaggle/ds/5390916
title: 🎬📽️The MOTHER OF ALL MOVIE REVIEW DATASETS
DOI: 10.5281/zenodo.12745630
title: Proximity Induced Charge Density Wave in a Graphene/1T-TaS2 Heterostructure

description: Dataset for figures in "Proximity Induced Charge Density Wave in a Graphene/1T-TaS2 Heterostructure" soon to be published in Nature Communications.
DOI: 10.5281/zenodo.12745631
title: Proximity Induced Charge Density Wave in a Graphene/1T-TaS2 Heterostructure

description: Dataset for figures in "Proximity Induced Charge Density Wave in a Graphene/1T-TaS2 Heterostructure" soon to be published in Nature Communications.
DOI: 10.5517/ccdc.csd.cc1nq4n5
title: CCDC 1540627: Experimental Crystal Structure Determination

description: Related Article: Marin Yamaguchi, Yuki Tsunoda, Shinnosuke Tanaka, Tomoyuki Haraguchi, Mutsumi Sugiyama, Shabana Noor and Takashiro Akitsu|2017|J.Indian Chem.Soc.|94|761|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1nv9sl
title: CCDC 1544630: Experimental Crystal Structure Determination

description: Related Article: Inmaculada Pérez-Toro, Alicia Domínguez-Martín, Duane Choquesillo-Lazarte, María Eugenia García-Rubiño, Josefa M. González-Pérez, Alfonso Castiñeiras, Antonio Bauzá, Antonio Frontera, Juan Niclós-Gutiérrez|2018|Polyhedron|145|218|doi:10.1016/j.poly.2018.02.011
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1pd77k
title: CCDC 1560888: Experimental Crystal Structure Determination

description: Related Article: Weixin Zhang, Daya Huang, Meijie Huang, Ju Huang, Dean Wang, Xingguo Liu, Michel Nguyen, Laure Vendier, Serge Mazères, Anne Robert, Yan Liu, Bernard Meunier|2018|ChemMedChem|13|684|doi:10.1002/cmdc.201700734
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1pfv21
title: CCDC 1562433: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton|2017|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.12760967
title: Metronidazole Cocrystals

description: Computational data:



Charge calculations for MEP

Crystal Explorer Calculations


Experimental Data:



IR spectra following the polymorphic phase transformation (metronidazole/gentisic acid cocrystals)
DOI: 10.5281/zenodo.12760968
title: Metronidazole Cocrystals

description: Computational data:



Charge calculations for MEP

Crystal Explorer Calculations


Experimental Data:



IR spectra following the polymorphic phase transformation (metronidazole/gentisic acid cocrystals)
DOI: 10.5517/ccdc.csd.cc1pd78l
title: CCDC 1560889: Experimental Crystal Structure Determination

description: Related Article: Weixin Zhang, Daya Huang, Meijie Huang, Ju Huang, Dean Wang, Xingguo Liu, Michel Nguyen, Laure Vendier, Serge Mazères, Anne Robert, Yan Liu, Bernard Meunier|2018|ChemMedChem|13|684|doi:10.1002/cmdc.201700734
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1pkzbk
title: CCDC 1566409: Experimental Crystal Structure Determination

description: Related Article: Sanil Rajak, Midhun Mohan, Alexandre A. Tremblay, Thierry Maris, Silvano Leal do Santos, Everaldo Carlos Venancio, Sydney Ferreira Santos, Adam Duong
|2019|ACS Omega|4|2708|doi:10.1021/acsomega.8b03517
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1pm1w7
title: CCDC 1567449: Experimental Crystal Structure Determination

description: Related Article: Badri Z. Momeni,  Farzaneh Rahimi,  Maryam Torrei,  Frank Rominger|2020|Appl.Organomet.Chem.|34|e5613|doi:10.1002/aoc.5613
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yt687
title: CCDC 1811679: Experimental Crystal Structure Determination

description: Related Article: Hamid Reza Khavasi, Narjes Rahimi|2019|CrystEngComm|21|2929|doi:10.1039/C8CE01795F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yt698
title: CCDC 1811680: Experimental Crystal Structure Determination

description: Related Article: Hamid Reza Khavasi, Narjes Rahimi|2019|CrystEngComm|21|2929|doi:10.1039/C8CE01795F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yt6b9
title: CCDC 1811681: Experimental Crystal Structure Determination

description: Related Article: Hamid Reza Khavasi, Narjes Rahimi|2019|CrystEngComm|21|2929|doi:10.1039/C8CE01795F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yyxph
title: CCDC 1816218: Experimental Crystal Structure Determination

description: Related Article: Koji Okinaga, Masaaki Suzuki|2022|CSD Communication|||
description: Related Article: Koji Okinaga, Masaaki Suzuki|2020|J.Porphyrins Phthalocyanines|24|135|doi:10.1142/S1088424619500664
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z87m3
title: CCDC 1825175: Experimental Crystal Structure Determination

description: Related Article: Cyril Rajnák, Filip Varga, Ján Titiš, Ján Moncol, Roman Boca|2018|Inorg.Chem.|57|4352|doi:10.1021/acs.inorgchem.7b03193
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zd0p2
title: CCDC 1828804: Experimental Crystal Structure Determination

description: Related Article: Lotfali Saghatforoush, Keyvan Moeini, Seyed Abolfazl Hosseini-Yazdi, Zahra Mardani, Akbar Bakhtiari, Alireza Hajabbas-Farshchi, Soghra Honarvar, Mohammed S.M. Abdelbaky|2019|Polyhedron|170|312|doi:10.1016/j.poly.2019.05.057
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zhp49
title: CCDC 1832321: Experimental Crystal Structure Determination

description: Related Article: Diane Isaacs, Chandler Cox, Mark A. Bezpalko, W. Scott Kassel, William G. Dougherty|2024|Inorg.Chim.Acta|561|121841|doi:10.1016/j.ica.2023.121841
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zq9pp
title: CCDC 1838693: Experimental Crystal Structure Determination

description: Related Article: Benjamin L. Dick, Seth M. Cohen|2018|Inorg.Chem.|57|9538|doi:10.1021/acs.inorgchem.8b01632
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zqb23
title: CCDC 1838705: Experimental Crystal Structure Determination

description: Related Article: Benjamin L. Dick, Seth M. Cohen|2018|Inorg.Chem.|57|9538|doi:10.1021/acs.inorgchem.8b01632
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zynbx
title: CCDC 1845750: Experimental Crystal Structure Determination

description: Related Article: Fei-Fan Chang, Wen-Qi Li, Fan-Da Feng, Wei Huang|2019|Inorg.Chem.|58|7812|doi:10.1021/acs.inorgchem.9b00454
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zyncy
title: CCDC 1845751: Experimental Crystal Structure Determination

description: Related Article: Fei-Fan Chang, Wen-Qi Li, Fan-Da Feng, Wei Huang|2019|Inorg.Chem.|58|7812|doi:10.1021/acs.inorgchem.9b00454
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.