cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3620414_d11
title: Additional file 8: Table S6. of Pathological classification of human iPSC-derived neural stem/progenitor cells towards safety assessment of transplantation therapy for CNS diseases

description: De novo copy number variations (CNVs) identified in the 1201C1 iPSC-derived NSPCs. (XLSX 35Â kb)
DOI: 10.6084/m9.figshare.c.3620495_d1
title: Additional file 3: Table S4. of Aging-associated DNA methylation changes in middle-aged individuals: the Young Finns study

description: A full table of 1202 a-CpGs with detailed information. (XLSX 183 kb)
DOI: 10.6084/m9.figshare.c.3620483_d3
title: Additional file 1: Table S1. of mRNA-seq reveals skeletal muscle atrophy in response to handling stress in a marine teleost, the red cusk-eel (Genypterus chilensis)

description: Complete list of up-regulated and down-regulated transcripts in response to handling stress. (XLSX 66Â kb)
DOI: 10.17863/cam.82770
title: Dataset for "Floating perovskite-BiVO4 devices for scalable solar fuel production"

description: The dataset contains the raw data that supports the findings of the study “Floating perovskite-BiVO4 devices for scalable solar fuel production”. Data was collected using the instrumentation described in the Methods section of the study.
DOI: 10.6084/m9.figshare.c.3620414_d13
title: Additional file 6: Table S4. of Pathological classification of human iPSC-derived neural stem/progenitor cells towards safety assessment of transplantation therapy for CNS diseases

description: De novo copy number variations (CNVs) identified in the 1210B2 iPSC-derived NSPCs. (XLSX 39Â kb)
DOI: 10.6084/m9.figshare.c.3620483_d4
title: Additional file 3: Table S3. of mRNA-seq reveals skeletal muscle atrophy in response to handling stress in a marine teleost, the red cusk-eel (Genypterus chilensis)

description: Enriched cellular component of up-regulated and down-regulated transcripts in response to handling stress. (XLSX 10Â kb)
DOI: 10.17863/cam.64406
title: Experimental Dataset of the PhD Thesis "Physics-Based Statistical Learning in Thermoacoustics"

description: Data obtained from an experimental campaign aimed at investigating the acoustic and thermoacoustic behaviour of an electrically-heated Rijke tube. This dataset contains: i) temperature mesurements at 8 different axial locations within the tube, in addition to a single ambient temperature measurement; ii) high-frequency pressure measurements at 6 different axial locations. Experiments are performed in the following cases: i) empty tube; ii) heater placed inside the tube but switched off; iii) heater and thermocouples placed inside the tube with the heater switched off; iv) heater and thermocouples placed inside the tube with the heater switched on. Range of electric powers investigated when the heater is switched on: 0 to 180 Watts (in steps of 10 Watts). At these heater powers, the system under investigation is thermoacoustically stable. Experiments are performed at the following heater positions: x_h/L = [0.01, 0.10, 0.15, 0.20, 0.25, 0.30, 0.35, 0.40, 0.45, 0.50, 0.55].
DOI: 10.6084/m9.figshare.c.3620483_d5
title: Additional file 5: Table S5. of mRNA-seq reveals skeletal muscle atrophy in response to handling stress in a marine teleost, the red cusk-eel (Genypterus chilensis)

description: Primer sequences for qPCR assay, amplicon size and PCR. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3620495_d4
title: Additional file 4: Table S5. of Aging-associated DNA methylation changes in middle-aged individuals: the Young Finns study

description: A summary table where the 70 genes with more than one hypomethylated or more than one hypermethylated a-CpGs per gene are presented. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3620414_d14
title: Additional file 7: Table S5. of Pathological classification of human iPSC-derived neural stem/progenitor cells towards safety assessment of transplantation therapy for CNS diseases

description: De novo copy number variations (CNVs) identified in the 1231A3 iPSC-derived NSPCs. (XLSX 79Â kb)
DOI: 10.6084/m9.figshare.c.3620510_d2
title: Additional file 1: of Combinatorial identification of DNA methylation patterns over age in the human brain

description: The union of significant CpG sites (annotated) for all age cuts, showing 1 if a specific site is significant for a specific age. (XLSX 67Â kb)
DOI: 10.17863/cam.75304
title: Research data supporting "Optoacoustics delineates murine breast cancer models displaying angiogenesis and vascular mimicry"

description: This set of data were generated by I Quiros-Gonzalez during 2015-2017 to be published in the paper of BJC "Optoacoustics delineates murine breast cancer models displaying angiogenesis and vascular mimicry". One of the files was generated by M. Tomaszewski. See the file 'Metadata...' for a detailed description of the dataset
DOI: 10.13120/ce92218a-b2dd-4ee4-a90f-87eadb7c41ab
title: Arctic Ocean - Beach litter aggregated datasets 2011/2023 v2024
title: Arctic_ocean_beach_litter_aggregated_datasets_ 2011/2023_v2024

description: EMODnet Chemistry aims to provide access to marine chemistry data sets and derived data products concerning eutrophication, ocean acidification, contaminants and litter. The chosen parameters are relevant for the Marine Strategy Framework Directive (MSFD), in particular for descriptors 5, 8, 9 and 10. The dataset contains standardized, harmonized and validated data collections from beach litter (monitoring and other sources). 
Datasets concerning beach and seafloor litter data are loaded in a central database after a semi-automated validation phase. Once loaded, a data assessment is performed in order to check data consistency and potential errors are corrected thanks to a feedback loop with data originators.
For beach litter, the harmonized datasets contain all unrestricted EMODnet Chemistry data on beach litter, including monitoring data, data from cleaning surveys and data from research. A relevant part of the monitoring data has been considered for assessment purposes by the European institutions and therefore is tagged as MSFD_monitoring. EMODnet beach litter data and databases are hosted and maintained by 'Istituto Nazionale di Oceanografia e di Geofisica Sperimentale, Division of Oceanography (OGS/NODC)' from Italy.
Data are formatted following Guidelines and forms for gathering marine litter data, which can be found at: https://doi.org/10.6092/15c0d34c-a01a-4091-91ac-7c4f561ab508. The updated vocabularies of admitted values are available in https://nodc.ogs.it/marinelitter/vocab.
The harmonized datasets can be downloaded as EMODnet Beach litter data format Version 7.0, which is a spreadsheet file composed of 4 sheets: beach metadata, survey metadata, animals and litter. Local_CDI field in the survey metadata sheet allows to retrieve the original data.
DOI: 10.15468/dl.h74p4u
title: Occurrence Download

description: A dataset containing 469 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Apocynum L."
 ]
}

 The dataset includes 469 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033201-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xmwquh
title: Occurrence Download

description: A dataset containing 396 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Réunion",
 "TaxonKey is Sphagnum L."
 ]
}

 The dataset includes 396 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033200-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17863/cam.81223
title: Research data supporting "Dissociable and Paradoxical Roles of Rat Medial and Lateral Orbitofrontal Cortex in Visual Serial Reversal Learning"

description: We investigated the effects of pharmacological inactivation of mOFC and lOFC on a deterministic serial visual reversal learning task for rats. For reference, we also targeted other areas previously implicated in reversal learning: prelimbic (PrL) and infralimbic (IL) prefrontal cortex, and basolateral amygdala (BLA). We also investigated the effect of lOFC and mOFC inactivatoin on visual discrimination (without a reversal component). Each .csv file corresponds to one experiment: reversal learning data from mOFC, lOFC, IL, PrL, BLA; novel visual discrimination data from mOFC, lOFC.
DOI: 10.17863/cam.109966
title: Research data supporting: "17O NMR spectroscopy reveals CO2 speciation and dynamics in hydroxide-based carbon capture materials"

description: See READ_ME metadata file breaking down the description of the research data in this repository supporting the associated publication
DOI: 10.17863/cam.22293
title: Research data supporting: "The Effect of Zirconium on the Omega Phase in Ti 24Nb-[0-8]Zr (at.%) Alloys"

description: The files here correspond to the raw TEM, APT and XRD data that are presented in the figures of the manuscript.
DOI: 10.17863/cam.71024
title: Research data supporting "Fabrication of a 3D Nanomagnetic Circuit with Multi-layered Materials for Applications in Spintronics"

description: There are two .mok files that contain the MOKE and Magneto-transport data measured from a 3D magnetic nanobridge.
DOI: 10.17863/cam.55351
title: Research data supporting "Vertically distributed wall-sources of buoyancy. Part 1: Unconfined"

description: A .zip file containing mean flow and turbulent quantities resulting from two-dimensional velocity and buoyancy experimental measurements of a vertically distributed wall-source of buoyancy along a vertical central plane normal to the wall. The velocity measurements were obtained using particle image velocimetry (PIV) and the buoyancy measurements were obtained using planar laser induced fluorescence (PLIF). The data are given in .mat files. The folder PIV_Experiments contains time-averaged PIV velocity data examining the full height of the wall from four experiments. The folder Simultaneous_experiments contains simultaneous velocity and buoyancy data. In particular, the time-averaged velocity, buoyancy, turbulent fluctuations, the Reynolds Stress and the turbulent buoyancy fluxes. The time-averages of all experiments were performed using 10,000 individual velocity/buoyancy fields for each experiment at a temporal resolution of 100 Hz. The quantities in each experiment file are presented using the same coordinate grid which is given in each file. See readme.pdf for a description of the flow quantities presented, their units and their corresponding names in the .mat files.
DOI: 10.17863/cam.8578
title: Research data supporting "Early Pregnancy-Associated Plasma Protein A Concentrations are Associated with Third Trimester Insulin Sensitivity"

description: Dataset for the manuscript by Petry CJ et al., "Early Pregnancy-Associated Plasma Protein A Concentrations are Associated with Third Trimester Insulin Sensitivity" published in the Journal of Clinical Endocrinology and Metabolism (doi 10.1210/jc.2017-00272).
DOI: 10.17863/cam.32482
title: Research data supporting "Gas-phase Raman spectroscopy of non-reacting flows: comparison between free-space and cavity-based spontaneous Raman emission"

description: We report on a comparison of free space and Cavity-Enhanced Raman Spectroscopy (CERS) for gas phase measurements of nitrogen and oxygen in ambient air. Real time analysis capabilities, and continuous Raman signals with low power diodes, make the technique non-invasive, affordable, compact and applicable for usage in non-reacting flows. We derive a comprehensive model for estimation of photon emission for both free space and cavity based signals and discuss tradeoffs in how to organise the cavity geometry for maximum gain relatively to free space. Measurements in both free and cavity configurations are compared to the expected cavity enhancement. The present results can serve as a quick guide on how to use continuous wave low power lasers in a cavity setup to obtain enhanced laser induced Raman scattering.
DOI: 10.17863/cam.6934
title: Data for Limits on Power Paper

description: Dataset contains MATLAB scripts for producing the paper's figures
DOI: 10.6084/m9.figshare.c.3620621_d4
title: Additional file 2: of Vine nitrogen status and volatile thiols and their precursors from plot to transcriptome level

description: Genes differentially expressed in response to N at (v + 28) and (v + 35) in 2014. p value ≤ 0.05 and │LFC│ ≥ 0.6. C, control; ns, not significant. (XLSX 12 kb)
DOI: 10.17863/cam.106209
title: I-CeM Lookup Table - Building Type code

description: This spreadsheet is designed to be used in conjunction with the Integrated Census Microdata (I-CeM) collection of historic census data covering the period 1851 to 1921. For further details of the I-CeM data collection, please visit the comprehensive project website at: https://www.campop.geog.cam.ac.uk/research/projects/icem/ Outline information on the I-CeM project are also provided on the README page of this spreadsheet. This file is specifically related to the I-CeM data collection variable BTCODE
DOI: 10.6084/m9.figshare.c.3620597_d10
title: Additional file 13: Table S3. of Punctuated chromatin states regulate Plasmodium falciparum antigenic variation at the intron and 2Â kb upstream regions

description: Genome coordinates of different var gene upstream regions. (XLSX 56Â kb)
DOI: 10.6084/m9.figshare.c.3620648_d2
title: MOESM2 of Quantification of angiotensin II-regulated proteins in urine of patients with polycystic and other chronic kidney diseases by selected reaction monitoring

description: Additional file 2. Data file used for analyses described in the manuscript.
DOI: 10.6084/m9.figshare.c.3620597_d11
title: Additional file 14: Table S4. of Punctuated chromatin states regulate Plasmodium falciparum antigenic variation at the intron and 2Â kb upstream regions

description: Genome coordinates of var gene regulatory regions and control gene regions (XLSX 136Â kb)
DOI: 10.17863/cam.105357
title: Research data supporting "Energy-space random walk in a driven disordered Bose gas"

description: The subfolders within the Code folder contain the code used to numerically solve the Schrödinger equation for a driven particle in a box (both in a 1D box and in a 3D box with disorder), as well as our stochastic simulations for our semi-classical model. The Figure folder provides data points shown in the figures of the paper, as generated by the aforementioned code.
DOI: 10.6084/m9.figshare.c.3620597_d12
title: Additional file 19: Table S6. of Punctuated chromatin states regulate Plasmodium falciparum antigenic variation at the intron and 2 kb upstream regions

description: Significant sequence motif locations around var 2 kb upstream regions [−200, +200]. (TXT 4 kb)
DOI: 10.17863/cam.96379
title: Dataset for: Unsupervised segmentation of 3D microvascular photoacoustic images using deep generative learning

description: VAN-GAN (Vessel Segmentation Generative Adversarial Network) Sweeney, P.W. et al. (2024) ''' Synthetic Paired Dataset ''' The raw data for physic-driven photoacoustic (PA) simulations and the synthetic vascular segmentation masks are to be placed in 'raw_data/PA_Simulations' and 'raw_data/Synthetic_Segmentations', respectively. PA Simulations are split across 5 zip files 'PA_Simulations_*'. Synthetic segmentations are in a single zip. Each dataset consist of 459 tiff stacks. Raw image size: 512 x 512 x 140 (X x Y x Z) with isotropic voxels with 20 um width/height/depth (for all images in datasets). ''' Preprocessing ''' Preprocessing steps are available in the VAN-GAN code. If the option is selected to saved filtered data, tiff stacks will be saved into their train/test/val subfolder in 'filtered'. Data for VAN-GAN is stored as numpy files in train/test/val folders in the main directory. A or B indicates whether the files belong to the PA simulation or segmentation mask dataset. Example outputs are provide in 'Example_Outputs'. Here, data was saved following training of the 200th epoch. The provided tiff stacks are either a predicted segmentation mask or a fake PA simulation.
DOI: 10.17863/cam.95715
title: Research data supporting "The influence of porosity on the superconducting properties of Y-Ba-Cu-O single grains"

description: This dataset contains the raw data for the journal article “The influence of porosity on the superconducting properties of Y-Ba-Cu-O single grains”. The file “README.txt” contains detailed information about the measurement of the raw data and the determination of the data shown in the paper. The file “Raw_data.xlsx” contains raw data used to plot the graphs shown in Figures 4, 5, 6(a), 6(b), 7, 9, 11 and 12. The file “1373_25mm_YBCO_tracking_microscope.tif” contains the raw microscope image shown in Figure 3. The zip folders “1A-1H” contain image stacks of sample pieces 1A-1H measured using 3D X-ray Computer Tomography (XCT). Each zip folder also contains a header file with more details about the XCT measurements. The folder “SQUID” contains the raw data used to determine Tc, ΔT90, and Jc measured using a Magnetic Properties Measurement System (MPMS). The folder “Optical_microscope” contains the raw images used to determine the Y-211 particle size and content. Furthermore, it also contains images where the Y-211 particles are marked in green and red, which were used to determine Y-211 size and content.
DOI: 10.15468/dl.b6afkt
title: Occurrence Download

description: A dataset listing the 63 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((-3.97988 39.87955,-3.98166 39.8752,-3.97903 39.86459,-3.9667 39.86808,-3.96564 39.87036,-3.9593 39.87271,-3.95139 39.87456,-3.94626 39.87941,-3.94733 39.88261,-3.96236 39.89045,-3.96735 39.8871,-3.96891 39.88048,-3.97653 39.87855,-3.97988 39.87955))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is CC-BY 4.0"
 ]
}

 The dataset's 63 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033197-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17863/cam.80290
title: Research data supporting Dopamine D2-like receptor stimulation blocks negative feedback in visual and spatial reversal learning in the rat: behavioural and computational evidence

description: We tested the hypotheses that D2R agonism impairs reversal learning by blocking negative feedback and that antagonism of D1-like receptors (D1R) impairs learning from positive feedback. Male Lister Hooded rats were trained on a novel visual reversal learning task. Performance on “probe trials”, during which the correct or incorrect stimulus was presented with a third, probabilistically rewarded (50% of trials) and therefore intermediate stimulus, revealed individual learning curves for the processes of positive and negative feedback. The effects of D2R and D1R agonists and antagonists were evaluated. A separate cohort was tested on a spatial probabilistic reversal learning (PRL) task after D2R agonism. There are eight .csv files in this folder, corresponding to the following experiments: (refer to Table 1 in the manuscript) Alsio_2019_quinpirole_PRL.csv -- Cohort VI probabilistic reversal learning Alsio_2019_quinpirole_VPVD_groups.csv -- Cohort II+III quinpirole experiment Alsio_2019_quinpirole_VPVD_trials.csv -- Cohort II+III quinpirole experiment Alsio_2019_Raclo_SCH39166_TSVR_trials.csv -- Cohort IV (TSVR experiment) Alsio_2019_Raclopride_SCH39166_VPVD_groups.csv Cohort IV+V (VPVD experiment) Alsio_2019_raclopride_SCH39166_VPVD_trials.csv Cohort IV+V (VPVD experiment) Alsio_2019_SKF81297_VPVD_groups.csv -- Cohort II+III SKF81297 experiment Alsio_2019_SKF81297_VPVD_trials.csv -- Cohort II+III SKF81297 experiment
DOI: 10.17863/cam.63587
title: Raw data supporting 'Decreased Water Mobility Contributes To Increased Alpha-Synuclein Aggregation'

description: Raw data files supporting the manuscript 'Decreased Water Mobility Contributes To Increased Alpha-Synuclein Aggregation'. One excel file (.xlsx) contains raw data supporting each figure. Figure 1, ThT based aggregation kinetics, data for the average of 4 wells from 3 experiments. Table 1, 3 data points for t50, tlag, % fluorescence and 6 wells for remaining monomer. Figure 2, THz average of 8 measurements for four conditions. Figure 3a+c, MS, average of 3 measurements. Figure 3b+4a+Suppl Fig.9, NMR 1 measurement of four conditions with assignments. Figure 4b, THz average of 3 measurements. Suppl. Fig. 4, height measurements from AFM of 8 fibrils. Suppl. Fig 5, radial pair distribution functions from AIMD simulations. Suppl. Fig 7+8, MS data from three repeats. SANS data is provided by a separate DOI fond in the manuscript.
DOI: 10.17863/cam.45156
title: Raw Data supporting article: Reversible and selective interconversion of hydrogen and carbon dioxide into formate by a semi-artificial formate hydrogenlyase mimic

description: Raw data and corresponding data analysis (Microsoft Office Excel, Origin) supporting Journal of American Chemical Society publication: "Reversible and Selective Interconversion of Hydrogen and Carbon Dioxide into Formate by a Semiartificial Formate Hydrogenlyase Mimic". Data include: three-electrode and two-electrode electrochemistry and electrolysis, colloidal particle system experiments (with indium tin oxide nanoparticles, cytochrome c, denatured enzymes), data analysis and product quantification.
DOI: 10.6084/m9.figshare.c.3620699_d1
title: Additional file 3: Data S3. of Hepatocytes respond differently to major dietary trans fatty acid isomers, elaidic acid and trans-vaccenic acid

description: DIGE identifications. Protein identifications by LC-MS/MS from DIGE analysis of the secretomes from cells incubated with transVA, EA and cisVA. Spots with significantly different intensities between samples in the DIGE analysis were excised, and the proteins were identified by LC-MS/MS and Mascot searches. Proteins identified by ≥ 2 unique peptides with ion scores ≥ 30 are highlighted. (XLSX 23 kb)
DOI: 10.17863/cam.47211
title: Research data supporting "A simple, reliable and robust reinforcement method for the fabrication of (RE)-Ba-Cu-O bulk superconductors"

description: Data set presents raw data used for analysis in the present work. Most of these are the trapped field data measured at 77 K. All the data provided in excel files. The mechanical property of different samples studied in the present work are measured at room temperature and are provided in the excel files. Corresponding figure numbers are mentioned for ease of reference.
DOI: 10.6084/m9.figshare.c.3620699_d2
title: Additional file 2: Data S2. of Hepatocytes respond differently to major dietary trans fatty acid isomers, elaidic acid and trans-vaccenic acid

description: SILAC transVA-EA- cisVA. Data from the SILAC investigation of the cellular response to transVA, EA and cisVA. (XLSX 867 kb)
DOI: 10.6084/m9.figshare.c.3620699_d3
title: Additional file 1: Data S1. of Hepatocytes respond differently to major dietary trans fatty acid isomers, elaidic acid and trans-vaccenic acid

description: GLC. Results from the gasâ  liquid chromatography analysis. On the left are in bold averages of mol% for three biological replicates and on the right their respective standard deviations. Raw data is provided for each replicate in separate sheets. (XLSX 48 kb)
DOI: 10.17863/cam.6533
title: Research data supporting "Implementation of Reversing Control on a Doubly-Articulated Vehicle" ASME DS-16-1225

description: A set of .fig files, that can be opened by Matlab or Octave, providing all data needed to generate the figures in the paper.