cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.f3dkrm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Metopia suifenhoensis Fan, 1965",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0220827-220831081235567/datasets/export for details.
DOI: 10.15468/dl.5qne42
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Codonorhiza falcata (L.f.) Goldblatt & J.C.Manning"
 ]
}

 The dataset includes 92 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004033-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.esk3ey
title: Occurrence Download

description: A dataset listing the 61038 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Issue is Geodetic datum assumed WGS84",
 "OccurrenceStatus is Present",
 "Year 1980-2022"
 ]
}

 The dataset's 61038 records were derived from 211 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0213382-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7303/syn12177057.2
title: Expected_DBSs_due_to_adjacent_SBSs.xlsx
DOI: 10.7303/syn3817650.9
title: MayoRNAseq_RNAseq_TCX_covariates.csv
DOI: 10.7303/syn5223705.6
title: MayoRNAseq_RNAseq_CBE_covariates.csv
DOI: 10.7303/syn20820023
title: Altitude and its inverse association with abdominal obesity in an Andean country
DOI: 10.7303/syn20812147
title: Quality of Life of Colorectal Cancer Survivors in a Ghanaian Population
DOI: 10.15468/dl.67x2xm
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Populus guzmanantlensis A.Vázquez & Cuevas)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018204-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7303/syn20755767
title: Chromatin accessibility profiles in late-onset Alzheimers disease (LOAD)
DOI: 10.7303/syn20697183.2
title: Figure 1 b- Pearson correlation comparing the onset of symptoms with the collection of PB-HPC.jpg
DOI: 10.15468/dl.nvb76k
title: Occurrence Download

description: A dataset containing 6261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "TaxonKey is Phyllomedusidae",
 "Year 1981-2025"
 ]
}

 The dataset includes 6261 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018205-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7303/syn20697186.1
title: Table 3 Complications and adverse events during the mobilization period.xlsx
DOI: 10.7303/syn20697188.1
title: Table 4 Previous studies of autologous hematopoietic stem cell transplantation HSCT for Crohs disease.xlsx
DOI: 10.7303/syn20697185.1
title: Table 2 Mobilization Kinetics.xlsx
DOI: 10.7303/syn20697183.1
title: Figure 1 b.jpg
DOI: 10.26165/juelich-data/i0bkk2
title: Data for: Modeling cassava root system architecture and the underlying dynamics in shoot–root carbon allocation during the early storage root bulking stage

description: Background and aims Plants store carbohydrates for later use during, e.g., night, drought, and recovery after stress. Carbon allocation presents the plant with tradeoffs, notably between growth and storage. We asked how this tradeoff works for cassava (Manihot esculenta) pre- and post-storage root (SR) formation and if manipulation of the number of storage organs and leaf growth rate might increase yield. Methods We developed a functional-structural plant model, called MeOSR, to simulate carbon partitioning underlying cassava growth and SR formation in conjunction with the root system's three-dimensional (3D) architecture (RSA). We compared the model results to experimental data and simulated phenotypes varying in the number of SR and leaf growth rate. Results The simulated 3D RSA and the root mass closely represented those of field-grown plants. The model simulated root growth and associated carbon allocation across developmental stages. Substantial accumulation of non-structural carbohydrates (NSC) preceded SR formation, suggesting sink-limited growth. SR mass and canopy photosynthesis might be increased by both increasing the number of SR and the leaf growth rate. Conclusion MeOSR offers a valuable tool for simulating plant growth, its associated carbon economy, and 3D RSA over time. In the first month, the specific root length increased due to root branching, but in the third month, it decreased due to secondary root growth. The accumulation of NSC might initiate SR development in cassava. Cassava growth is relatively slow during the first 3 months, and a faster crop establishment combined with a greater SR growth might increase yield.
DOI: 10.7303/syn20697184.1
title: Table 1 Demographic and baseline data of Crohns disease patients prior to hematopoietic stem cell t.xlsx
DOI: 10.7303/syn20697182.1
title: Figure 1 a.jpg
DOI: 10.7303/syn11615855.1
title: CMC_RhesusMacaque_DLPFC_geneExpressionRaw.txt
DOI: 10.15468/dl.wpktwv
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Populus mexicana Wesm.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 106 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018206-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7303/syn20554222
title: TeamIGIBpredictionPretermBirthSC1
DOI: 10.5281/zenodo.14825507
title: Cactus genome alignments (.hal) for HintermannBoltHawkinsEtAl

description: This dataset contains genome alignments in .hal format obtained using Progressive Cactus v.2.6.7 (https://doi.org/10.1038/s41586-020-2871-y). The cactus command was used with default parameters to obtain the hal alignments. The alignments represent genomic data for species analyzed in the study "Evolutionary co-option of an ancestral cloacal regulatory landscape during the emergence of digits and genitals" by Hintermann, Bolt, Hawkins et al. 

vertebrate_13way.hal contains whole-genome alignment of follwoing species :

Mus musculusOrnithorhynchus anatinusGallus gallusAnolis carolinensisXenopus tropicalisLatimeria chalumnaeDanio rerioTakifugu rubripesPetromyzon marinusLepisosteus oculatusScyliorhinus caniculaLeucoraja erinaceaAmia calva

 

mm_zf_lo.hal contains alignments of the HoxD clusters of following species:

Mus musculusDanio rerioLepisosteus oculatus

 

vertebrate_alignments_genomes.txt lists genome version for each species
DOI: 10.5281/zenodo.14825508
title: Cactus genome alignments (.hal) for HintermannBoltHawkinsEtAl

description: This dataset contains genome alignments in .hal format obtained using Progressive Cactus v.2.6.7 (https://doi.org/10.1038/s41586-020-2871-y). The cactus command was used with default parameters to obtain the hal alignments. The alignments represent genomic data for species analyzed in the study "Evolutionary co-option of an ancestral cloacal regulatory landscape during the emergence of digits and genitals" by Hintermann, Bolt, Hawkins et al. 

vertebrate_13way.hal contains whole-genome alignment of follwoing species :

Mus musculusOrnithorhynchus anatinusGallus gallusAnolis carolinensisXenopus tropicalisLatimeria chalumnaeDanio rerioTakifugu rubripesPetromyzon marinusLepisosteus oculatusScyliorhinus caniculaLeucoraja erinaceaAmia calva

 

mm_zf_lo.hal contains alignments of the HoxD clusters of following species:

Mus musculusDanio rerioLepisosteus oculatus

 

vertebrate_alignments_genomes.txt lists genome version for each species
DOI: 10.57703/ce-zfz9b
title: Q48

description: AFM measurements (10 x 10 and 100 x 100 um^2)
Confocal measurements (1 x 1 mm^2)
DOI: 10.5281/zenodo.11191422
title: Data for "Simulating and analysing seabird flyways: an approach combining least-cost path modelling and machine learning"
DOI: 10.5281/zenodo.11191421
title: Data for "Simulating and analysing seabird flyways: an approach combining least-cost path modelling and machine learning"
DOI: 10.5281/zenodo.14825746
title: Data for "Simulating and analysing seabird flyways: an approach combining least-cost path modelling and machine learning"
DOI: 10.7303/syn20048270.1
title: BDF11121390 final para Synapse 2019.xlsx
DOI: 10.7303/syn16984411.2
title: CER_Mayo_cis_eQTL_release.csv
DOI: 10.5281/zenodo.14825748
title: Urban light pollution in local climate zones: a comparative study for global cities

description: Introduction

This archive contains all the data used in the submitted manuscript titled "Urban light pollution in local climate zones: a comparative study for global cities". There are several (sub)folders with various data.

1) 01_Abs-values: Absolute values of the nighttime radiance (NTR) outputs proceeded by R script in PNG and SVG format.

2) 02_Differences: Absolute and relative differences of the nighttime radiance (NTR) between the analyzed years and the reference year 2012. Outputs proceeded by R script in PNG and SVG format. Note that some relative differences should be misleading (e.g., in the case of very small values should be increased to enormous).

3) 03_Cities: Individual results for all the cities including all boxplots, GIS layers, maps, and tables. Some cities have a different name as was used in the manuscript (e.g., Duisburg-Dortmund vs. Ruhr Region).

The rest of the results resulting from the R script are available in the root folder (overview statistics, boxplots, and summary table - sumtable_LP_all_2012-2023.csv). All the VIIRS data for the whole world will be provided upon request.
DOI: 10.6084/m9.figshare.28358759
title: Data for Data Repository .docx

description: Objectives: In this paper, we aim at examining the selected festivals and rituals of Odisha, namely, <i>Raja Parba, Bakula Amavasya, Kartika Purnima, Makar Sankranti, Nuakhai, Khudurukuni Osha and Sudasha Brata.</i> The paper aims at exploring how the celebrations through their reverence and respect for nature embody environmental wisdom and strengthen the connection between man and their natural surroundings.Methodology: The research examines a few selected rituals and traditions of Odisha viz. Nuakhai, Bakula Amavasya, Kartika Purnima, Makar Sankranti, Khudurukuni Osha, Sudasha Brata and Raja Parba to explore the significance of the festivals in preserving the environment. The information on the origin, practices in the rituals, ways of celebration, significance have been drawn from the experiences of the two authors of the paper who were born and brought up in Odisha. The information was further verified by the elderly people in the authors' families. For further information we have also referred to secondary sources such as articles, research papers, blogs and books. Through the perspectives of the theories of ecocriticism and cultural ecology we have tried to establish how these festivals and rituals are connected with nature.<br><br>
DOI: 10.6084/m9.figshare.28358759.v1
title: Data for Data Repository .docx

description: Objectives: In this paper, we aim at examining the selected festivals and rituals of Odisha, namely, <i>Raja Parba, Bakula Amavasya, Kartika Purnima, Makar Sankranti, Nuakhai, Khudurukuni Osha and Sudasha Brata.</i> The paper aims at exploring how the celebrations through their reverence and respect for nature embody environmental wisdom and strengthen the connection between man and their natural surroundings.Methodology: The research examines a few selected rituals and traditions of Odisha viz. Nuakhai, Bakula Amavasya, Kartika Purnima, Makar Sankranti, Khudurukuni Osha, Sudasha Brata and Raja Parba to explore the significance of the festivals in preserving the environment. The information on the origin, practices in the rituals, ways of celebration, significance have been drawn from the experiences of the two authors of the paper who were born and brought up in Odisha. The information was further verified by the elderly people in the authors' families. For further information we have also referred to secondary sources such as articles, research papers, blogs and books. Through the perspectives of the theories of ecocriticism and cultural ecology we have tried to establish how these festivals and rituals are connected with nature.<br><br>
DOI: 10.7303/syn18930922.2
title: x. 1,350 synthetic whole-genome mutational spectra -150 spectra from each of 9 cancer types
DOI: 10.7303/syn18913127
title: Fusion driven JMML: A novel CCDC88C-FLT3 fusion responsive to sorafenib identified by RNA sequencing
DOI: 10.15468/dl.r6s7xj
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Populus simaroa Rzed.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018208-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7303/syn18909829.4
title: ix. Synthetic Whole-Exome Spectra Based on Many Cancer Types - 2700 Tumours
DOI: 10.7303/syn18358379.3
title: CMC_Human_rnaSeq_metadata.csv
DOI: 10.7303/syn18693206.1
title: Lay-delivered behavioral activation for depressed senior center clients: Pilot RCT
DOI: 10.7303/syn18824984
title: INDIGO-MTB Model
DOI: 10.15468/dl.h87xq4
title: Occurrence Download

description: A dataset containing 260 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Dicerandra Benth."
 ]
}

 The dataset includes 260 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018210-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7303/syn18511087.1
title: Summary of results of tests on synthetic mutational spectra
DOI: 10.15468/dl.23cfq5
title: Occurrence Download

description: A dataset containing 5136 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Furcraea foetida (L.) Haw."
 ]
}

 The dataset includes 5136 records from 210 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018209-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14825764
title: Data set for the manuscript: "Hygienic behaviour in a non-eusocial insect: insights into the evolution of social immunity"

description: Data sets and R script used in the manuscript: "Hygienic behaviour in a non-eusocial insect: insights into the evolution of social immunity"
DOI: 10.5281/zenodo.14825765
title: Data set for the manuscript: "Hygienic behaviour in a non-eusocial insect: insights into the evolution of social immunity"

description: Data sets and R script used in the manuscript: "Hygienic behaviour in a non-eusocial insect: insights into the evolution of social immunity"
DOI: 10.57703/ce-m4774
title: Q49

description: AFM (10 um^2 and 100 um^2)
Confocal (1 mm^2)
DOI: 10.7303/syn18635079
title: JID_psoriasis
DOI: 10.15468/dl.cdqfjx
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Prockia crucis P.Browne ex L.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 19 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018212-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7303/syn11801895.2
title: DBS classification for mutational signatures
DOI: 10.7303/syn18524965
title: Recomendations for Heart Rate Signal Adquisition
DOI: 10.7303/syn17081868.2
title: CMC_ATACSeq_consensus-SCZcontrol.bw
DOI: 10.7303/syn17081859.2
title: CMC_ATACSeq_consensus-SCZcase.bw
DOI: 10.7303/syn3354385.4
title: CMC_Human_clinical_metadata.csv
DOI: 10.7303/syn18080588.4
title: CMC_Human_sampleIDkey_metadata
DOI: 10.7303/syn18358379.2
title: CMC_Human_rnaSeq_metadata.csv
DOI: 10.7303/syn18401057.2
title: CMC_Human_ATACSeq_metadata.csv
DOI: 10.7303/syn18500219.1
title: vii.b. Synthetic Spectra Hyper Low Secondary
DOI: 10.7303/syn18485159
title: Cardiorespiratory and Musculoskeletal Fitness Data
DOI: 10.6084/m9.figshare.28320134.v36
title: Logic Syllogistic Algorithms Fedorchenko MV.txt

description: Logic Syllogistic Algorithms
DOI: 10.7303/syn18421089
title: 2019 American Journal of Pathology Data
DOI: 10.15468/dl.nkwpm5
title: Occurrence Download

description: A dataset containing 11235 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ipomoea nil (L.) Roth"
 ]
}

 The dataset includes 11235 records from 489 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018214-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qpr8uh
title: Occurrence Download

description: A dataset containing 2658610 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Urticaceae"
 ]
}

 The dataset includes 2658610 records from 6191 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018202-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8wxbr4
title: Occurrence Download

description: A dataset containing 9187 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Italy, Austria)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ruscus aculeatus L.",
 "Year is greater than or equal to 1995"
 ]
}

 The dataset includes 9187 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015335-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.revs53
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Uroplectes pilosus (Thorell, 1876))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 88 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015339-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h6raby
title: Occurrence Download

description: A dataset containing 3198 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Striga asiatica (L.) Kuntze"
 ]
}

 The dataset includes 3198 records from 162 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015338-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w68cuz
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "TaxonKey is Ficopomatus enigmaticus (Fauvel, 1923)"
 ]
}

 The dataset includes 23 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015340-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wxcufj
title: Occurrence Download

description: A dataset containing 40535 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hemigrapsus sanguineus (De Haan, 1835)"
 ]
}

 The dataset includes 40535 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015337-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7w2txg
title: Occurrence Download

description: A dataset containing 1494823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 {
 "or" : [
 "Country is Norway",
 "Country is Svalbard and Jan Mayen"
 ]
 }
 ]
}

 The dataset includes 1494823 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015303-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28768049
title: Data and R Code in<i>"</i><b><i>Community functional traits shift under long-term nitrogen addition: Roles of intraspecific trait variability and species turnover</i></b><i>"</i>

description: This dataset contains raw and processed data, along with R scripts used to generate Figures 1–6 in the manuscript titled <i>"</i><b><i>Community functional traits shift under long-term nitrogen addition: Roles of intraspecific trait variability and species turnover</i></b><i>"</i>. The study explores the trait-based responses of plants to nitrogen addition, using linear regression models, structural equation modeling, and Sum of squares decomposition analysis. Each figure is associated with a dataset (<code>.xlsx</code>) and corresponding R script(s) for full reproducibility.
DOI: 10.6084/m9.figshare.28768049.v2
title: Data and R Code in<i>"</i><b><i>Community functional traits shift under long-term nitrogen addition: Roles of intraspecific trait variability and species turnover</i></b><i>"</i>

description: This dataset contains raw and processed data, along with R scripts used to generate Figures 1–6 in the manuscript titled <i>"</i><b><i>Community functional traits shift under long-term nitrogen addition: Roles of intraspecific trait variability and species turnover</i></b><i>"</i>. The study explores the trait-based responses of plants to nitrogen addition, using linear regression models, structural equation modeling, and Sum of squares decomposition analysis. Each figure is associated with a dataset (<code>.xlsx</code>) and corresponding R script(s) for full reproducibility.