cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5849130.v1
title: Additional file 6 of The complex simplicity of the brittle star nervous system

description: All components of the arm nervous system (green â ectoneural system; magenta â hyponeural system; light blue â mixed peripheral nerves) plus the intervertebral muscles (brown) and hydrocoel (red). This is an interactive 3D model generated from the original .blend file (Additional file 2) using the Blend4Web tool ( https://www.blend4web.com ). The model can be opened in any modern web browser. Upon opening, zoom out using the scroll wheel. To rotate, press and hold the left mouse button. To pan the view, press and hold the right mouse button. (HTML 23,040 kb)
DOI: 10.6084/m9.figshare.5849070
title: Additional file 8: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: A Jupyter Notebook demonstration of how to convert a JSON document from MyVariant.info into RDF using JSON-LD. (HTML 248Â kb)
DOI: 10.6084/m9.figshare.5849070.v1
title: Additional file 8: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: A Jupyter Notebook demonstration of how to convert a JSON document from MyVariant.info into RDF using JSON-LD. (HTML 248Â kb)
DOI: 10.6084/m9.figshare.5849067
title: Additional file 2 of The complex simplicity of the brittle star nervous system

description: The 3D model of the arm nervous system (one segment is shown only) saved as a .blend file. The file can be opened and manipulated in Blender, a free open-source 3D editor ( https://www.blender.org/ ). The following anatomical structures are represented: green – ectoneural system; magenta – hyponeural system; light blue – mixed peripheral nerves; brown – intervertebral muscles; red – water-vascular system (hydrocoel). A side of the scale cube measures 100 μm. (BLEND 32,768 kb)
DOI: 10.6084/m9.figshare.5849067.v1
title: Additional file 2 of The complex simplicity of the brittle star nervous system

description: The 3D model of the arm nervous system (one segment is shown only) saved as a .blend file. The file can be opened and manipulated in Blender, a free open-source 3D editor ( https://www.blender.org/ ). The following anatomical structures are represented: green – ectoneural system; magenta – hyponeural system; light blue – mixed peripheral nerves; brown – intervertebral muscles; red – water-vascular system (hydrocoel). A side of the scale cube measures 100 μm. (BLEND 32,768 kb)
DOI: 10.6084/m9.figshare.5849052
title: Additional file 7: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: A Jupyter Notebook demonstration of how to cross-link BioThings APIs in order to perform complex queries across APIs. (HTML 270Â kb)
DOI: 10.6084/m9.figshare.5849052.v1
title: Additional file 7: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: A Jupyter Notebook demonstration of how to cross-link BioThings APIs in order to perform complex queries across APIs. (HTML 270Â kb)
DOI: 10.6084/m9.figshare.5849037
title: Additional file 6: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: A Jupyter Notebook demonstration of BioThings API registry. (HTML 249Â kb)
DOI: 10.6084/m9.figshare.5849037.v1
title: Additional file 6: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: A Jupyter Notebook demonstration of BioThings API registry. (HTML 249Â kb)
DOI: 10.6084/m9.figshare.5849034
title: Additional file 11 of The complex simplicity of the brittle star nervous system

description: Intervertebral muscles of the arm. Interactive 3D model. See caption to Additional fileÂ 6 for instructions. (HTML 5222 kb)
DOI: 10.6084/m9.figshare.5849034.v1
title: Additional file 11 of The complex simplicity of the brittle star nervous system

description: Intervertebral muscles of the arm. Interactive 3D model. See caption to Additional fileÂ 6 for instructions. (HTML 5222 kb)
DOI: 10.6084/m9.figshare.5849019
title: Additional file 2: of Evolutionary fates of universal stress protein paralogs in Platyhelminthes

description: Protein and upstream sequences. (TXT 117 kb)
DOI: 10.6084/m9.figshare.5849019.v1
title: Additional file 2: of Evolutionary fates of universal stress protein paralogs in Platyhelminthes

description: Protein and upstream sequences. (TXT 117 kb)
DOI: 10.6084/m9.figshare.5849016
title: Additional file 10 of The complex simplicity of the brittle star nervous system

description: Arm hydrocoel. Interactive 3D model. See caption to Additional fileÂ 6 for instructions. (HTML 2837 kb)
DOI: 10.6084/m9.figshare.5849016.v1
title: Additional file 10 of The complex simplicity of the brittle star nervous system

description: Arm hydrocoel. Interactive 3D model. See caption to Additional fileÂ 6 for instructions. (HTML 2837 kb)
DOI: 10.6084/m9.figshare.5849010
title: Additional file 5: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: Table listingÂ 84 variants for which the reported allele frequency varied by more than 50% across the resources recorded in MyVariant.info . (CSV 40Â kb)
DOI: 10.6084/m9.figshare.5849010.v1
title: Additional file 5: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: Table listingÂ 84 variants for which the reported allele frequency varied by more than 50% across the resources recorded in MyVariant.info . (CSV 40Â kb)
DOI: 10.6084/m9.figshare.5849004
title: Additional file 1: Table S1. of Evolutionary fates of universal stress protein paralogs in Platyhelminthes

description: Details of each primer designed for the six USP genes. Table S2. USP orthologues relationship between Platyhelminthes species. Table S3. Motif scanning in promoter regions of the USP genes. Table S4 SELECTON results for Cestoda species. Table S5. IDs used for M. lignano and G. salaris in the phylogenetic analysis. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.5849004.v1
title: Additional file 1: Table S1. of Evolutionary fates of universal stress protein paralogs in Platyhelminthes

description: Details of each primer designed for the six USP genes. Table S2. USP orthologues relationship between Platyhelminthes species. Table S3. Motif scanning in promoter regions of the USP genes. Table S4 SELECTON results for Cestoda species. Table S5. IDs used for M. lignano and G. salaris in the phylogenetic analysis. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.5848974
title: Additional file 3: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: Table listingsÂ 10,842 unique variants that had different rsids reported across the resources recorded in MyVariant.info . (CSV 658Â kb)
DOI: 10.6084/m9.figshare.5848974.v1
title: Additional file 3: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: Table listingsÂ 10,842 unique variants that had different rsids reported across the resources recorded in MyVariant.info . (CSV 658Â kb)
DOI: 10.6084/m9.figshare.5848947
title: Additional file 2: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: A Jupyter Notebook demonstration of how to perform data discrepancy check using JSON-LD. (HTML 263Â kb)
DOI: 10.6084/m9.figshare.5848947.v1
title: Additional file 2: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: A Jupyter Notebook demonstration of how to perform data discrepancy check using JSON-LD. (HTML 263Â kb)
DOI: 10.6084/m9.figshare.5848932
title: Additional file 1: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: A Jupyter Notebook demonstration of how to Make Data-structure Neutral Queries by URI. (HTML 256Â kb)
DOI: 10.6084/m9.figshare.5848932.v1
title: Additional file 1: of Cross-linking BioThings APIs through JSON-LD to facilitate knowledge exploration

description: A Jupyter Notebook demonstration of how to Make Data-structure Neutral Queries by URI. (HTML 256Â kb)
DOI: 10.6084/m9.figshare.5848848
title: Additional file 3: of The effects of group versus intensive housing on the retention of genetic diversity in insurance populations

description: Raw Data Male Tasmanian Devils. (CSV 5 kb)
DOI: 10.6084/m9.figshare.5848848.v1
title: Additional file 3: of The effects of group versus intensive housing on the retention of genetic diversity in insurance populations

description: Raw Data Male Tasmanian Devils. (CSV 5 kb)
DOI: 10.6084/m9.figshare.5848845
title: Additional file 3: of A human gut phage catalog correlates the gut phageome with type 2 diabetes

description: This xlsx file contains the following supplementary spreadsheets, each included as a separate tab in a single Microsoft Excel file: TableS2-TableS5. (XLSX 242 kb)
DOI: 10.6084/m9.figshare.5848833
title: Additional file 2: of The effects of group versus intensive housing on the retention of genetic diversity in insurance populations

description: Raw Data Female Tasmanian Devils. (CSV 4 kb)
DOI: 10.6084/m9.figshare.5848833.v1
title: Additional file 2: of The effects of group versus intensive housing on the retention of genetic diversity in insurance populations

description: Raw Data Female Tasmanian Devils. (CSV 4 kb)
DOI: 10.6084/m9.figshare.5848716
title: MOESM5 of Regulatory role of microRNA in mesenteric lymph nodes after Salmonella Typhimurium infection

description: Additional file 5. miRNA target protein prediction. Prediction of targets from the differentially expressed miRNA (A) were integrated with proteomic data (B) and only negatively correlated miRNA-protein pairing (C) was used for further analysis.
DOI: 10.6084/m9.figshare.5848716.v1
title: MOESM5 of Regulatory role of microRNA in mesenteric lymph nodes after Salmonella Typhimurium infection

description: Additional file 5. miRNA target protein prediction. Prediction of targets from the differentially expressed miRNA (A) were integrated with proteomic data (B) and only negatively correlated miRNA-protein pairing (C) was used for further analysis.
DOI: 10.6084/m9.figshare.5848713
title: Additional file 7: Table S7. of Breed-dependent microRNA expression in the primary culture of skeletal muscle cells subjected to myogenic differentiation

description: Functional analysis of miRNA target genes using KEGG (DAVID). (XLS 58Â kb)
DOI: 10.6084/m9.figshare.5848713.v1
title: Additional file 7: Table S7. of Breed-dependent microRNA expression in the primary culture of skeletal muscle cells subjected to myogenic differentiation

description: Functional analysis of miRNA target genes using KEGG (DAVID). (XLS 58Â kb)
DOI: 10.6084/m9.figshare.5848701
title: MOESM4 of Regulatory role of microRNA in mesenteric lymph nodes after Salmonella Typhimurium infection

description: Additional file 4. miRNA differentially expressed in porcine mesenteric lymph nodes after Salmonella Typhimurium infection. miRNA differentially expressed in porcine mesenteric lymph nodes 2 days after Salmonella Typhimurium infection.
DOI: 10.6084/m9.figshare.5848701.v1
title: MOESM4 of Regulatory role of microRNA in mesenteric lymph nodes after Salmonella Typhimurium infection

description: Additional file 4. miRNA differentially expressed in porcine mesenteric lymph nodes after Salmonella Typhimurium infection. miRNA differentially expressed in porcine mesenteric lymph nodes 2 days after Salmonella Typhimurium infection.
DOI: 10.6084/m9.figshare.5848698
title: Additional file 6: Table S6. of Breed-dependent microRNA expression in the primary culture of skeletal muscle cells subjected to myogenic differentiation

description: miRNA target genes belonging to the muscle organ development process (PANTHER). (XLS 43Â kb)
DOI: 10.6084/m9.figshare.5848698.v1
title: Additional file 6: Table S6. of Breed-dependent microRNA expression in the primary culture of skeletal muscle cells subjected to myogenic differentiation

description: miRNA target genes belonging to the muscle organ development process (PANTHER). (XLS 43Â kb)
DOI: 10.6084/m9.figshare.5848686
title: MOESM3 of Regulatory role of microRNA in mesenteric lymph nodes after Salmonella Typhimurium infection

description: Additional file 3. miRNA profile of control and infected mesenteric lymph node. Sequencing reads mapped to human (A) and porcine (B) miRNA databases, as well as miRNA exclusively mapped to each of those reference databases (C).
DOI: 10.6084/m9.figshare.5848686.v1
title: MOESM3 of Regulatory role of microRNA in mesenteric lymph nodes after Salmonella Typhimurium infection

description: Additional file 3. miRNA profile of control and infected mesenteric lymph node. Sequencing reads mapped to human (A) and porcine (B) miRNA databases, as well as miRNA exclusively mapped to each of those reference databases (C).
DOI: 10.6084/m9.figshare.5848683
title: Additional file 5: Table S5. of Breed-dependent microRNA expression in the primary culture of skeletal muscle cells subjected to myogenic differentiation

description: Functional analysis of miRNA target genes using the DAVID database (BP - biological processes). (XLS 145Â kb)
DOI: 10.6084/m9.figshare.5848683.v1
title: Additional file 5: Table S5. of Breed-dependent microRNA expression in the primary culture of skeletal muscle cells subjected to myogenic differentiation

description: Functional analysis of miRNA target genes using the DAVID database (BP - biological processes). (XLS 145Â kb)
DOI: 10.6084/m9.figshare.5848668
title: Additional file 4: Table S4. of Breed-dependent microRNA expression in the primary culture of skeletal muscle cells subjected to myogenic differentiation

description: Target gene prediction for identified miRNAs (TargetScan; Pathway Studio Web, Elsevier, Netherlands). (XLS 2245Â kb)
DOI: 10.6084/m9.figshare.5848668.v1
title: Additional file 4: Table S4. of Breed-dependent microRNA expression in the primary culture of skeletal muscle cells subjected to myogenic differentiation

description: Target gene prediction for identified miRNAs (TargetScan; Pathway Studio Web, Elsevier, Netherlands). (XLS 2245Â kb)
DOI: 10.6084/m9.figshare.5848662
title: MOESM2 of Regulatory role of microRNA in mesenteric lymph nodes after Salmonella Typhimurium infection

description: Additional file 2. Summary of mapped reads to human and pig genomes. Table showing input reads, reads after pre-processing (clean reads), and reads mapped to human and porcine mature miRNA’ databases.
DOI: 10.6084/m9.figshare.5848662.v1
title: MOESM2 of Regulatory role of microRNA in mesenteric lymph nodes after Salmonella Typhimurium infection

description: Additional file 2. Summary of mapped reads to human and pig genomes. Table showing input reads, reads after pre-processing (clean reads), and reads mapped to human and porcine mature miRNA’ databases.
DOI: 10.6084/m9.figshare.5848650
title: Additional file 3 of MPBoot: fast phylogenetic maximum parsimony tree inference and bootstrap approximation

description: Spreadsheet of summary statistics for comparing MPBoot and TNT bootstrap tree MP-scores by replicate counts and by MP-score difference for 114 TreeBASE MSAs. (XLS 51 kb)
DOI: 10.6084/m9.figshare.5848650.v1
title: Additional file 3 of MPBoot: fast phylogenetic maximum parsimony tree inference and bootstrap approximation

description: Spreadsheet of summary statistics for comparing MPBoot and TNT bootstrap tree MP-scores by replicate counts and by MP-score difference for 114 TreeBASE MSAs. (XLS 51 kb)
DOI: 10.6084/m9.figshare.5848644
title: MOESM1 of Regulatory role of microRNA in mesenteric lymph nodes after Salmonella Typhimurium infection

description: Additional file 1. Primers used in this study. Information of primers used in this study.
DOI: 10.6084/m9.figshare.5848644.v1
title: MOESM1 of Regulatory role of microRNA in mesenteric lymph nodes after Salmonella Typhimurium infection

description: Additional file 1. Primers used in this study. Information of primers used in this study.
DOI: 10.6084/m9.figshare.5848629
title: Additional file 2 of MPBoot: fast phylogenetic maximum parsimony tree inference and bootstrap approximation

description: Description of data: MP-score and runtimes (in seconds) of examined methods on 114 out of 115 TreeBASE MSAs. The file contains two sheets: one for results of analyses under uniform cost matrices and the other for those under non-uniform cost matrices. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.5848629.v1
title: Additional file 2 of MPBoot: fast phylogenetic maximum parsimony tree inference and bootstrap approximation

description: Description of data: MP-score and runtimes (in seconds) of examined methods on 114 out of 115 TreeBASE MSAs. The file contains two sheets: one for results of analyses under uniform cost matrices and the other for those under non-uniform cost matrices. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.5848626
title: Additional file 2: Table S2. of Breed-dependent microRNA expression in the primary culture of skeletal muscle cells subjected to myogenic differentiation

description: Differences in miRNA expression in primary cultures of skeletal muscle cells originating from both HER/LIM breeds, when compared to the HF breed (FDR ≤ 0.05). (XLS 69 kb)
DOI: 10.6084/m9.figshare.5848626.v1
title: Additional file 2: Table S2. of Breed-dependent microRNA expression in the primary culture of skeletal muscle cells subjected to myogenic differentiation

description: Differences in miRNA expression in primary cultures of skeletal muscle cells originating from both HER/LIM breeds, when compared to the HF breed (FDR ≤ 0.05). (XLS 69 kb)
DOI: 10.6084/m9.figshare.5848605
title: Additional file 1: Table S1. of Breed-dependent microRNA expression in the primary culture of skeletal muscle cells subjected to myogenic differentiation

description: Real-time qPCR primers for selected genes. (XLS 38Â kb)
DOI: 10.6084/m9.figshare.5848605.v1
title: Additional file 1: Table S1. of Breed-dependent microRNA expression in the primary culture of skeletal muscle cells subjected to myogenic differentiation

description: Real-time qPCR primers for selected genes. (XLS 38Â kb)
DOI: 10.6084/m9.figshare.5848290
title: Supply Chain Data - 2SSP SC

description: # 2SSP SC Model - Data Set<br>Dat set tested for 2SSP SC Model PhD research<br><br>Please cite as:<br>Almeida, J. F. F.; Conceição, S. V.; Pinto, L. R.; Camargo, R. S.; Júnior, G. M. (2018): 2SSP-DataSet. figshare. https://doi.org/10.6084/m9.figshare.5848290
DOI: 10.6084/m9.figshare.5848290.v1
title: Supply Chain Data - 2SSP SC

description: # 2SSP SC Model - Data Set<br>Dat set tested for 2SSP SC Model PhD research<br><br>Please cite as:<br>Almeida, J. F. F.; Conceição, S. V.; Pinto, L. R.; Camargo, R. S.; Júnior, G. M. (2018): 2SSP-DataSet. figshare. https://doi.org/10.6084/m9.figshare.5848290
DOI: 10.6084/m9.figshare.5848221
title: Dataset of monitoring of ceramic grinding tools

description: This repository contains the data that were used in following article: <br>Monitoring of ceramic grinding tools using amplitude modulation of vibration acceleration (under review.)<br>Test01, 02 and 03.txt are the results of the side-face grinding tests using a cylindrical tool with a diameter of 20 mm, corresponding to the Table 1 and the Figure 5–10. <br>Test04.txt is the result of the additional side-face grinding test, corresponding to the Table 2 and the Figure 11. <br>Test05, 06 and 07.txt are the results of the side-face grinding tests using a cylindrical tool with a diameter of 9 mm and divided edge, corresponding to the Table 3 and the Figure 15–17. <br>Test08–16.txt are the results of the upper-surface grinding tests using a cylindrical tool with a diameter of 10 mm, corresponding to the Table 4 and the Figure 19, 20. <br>ToolProfile_DamagedPart.txt, ToolProfile_UndamagedPart.txt are surface shape of tool after crash damage to tool, corresponding to the Figure 13. <br>
DOI: 10.6084/m9.figshare.5848164
title: Data for Tan et al, 2018

description: Dataset for Tan et al (2018)
DOI: 10.6084/m9.figshare.5848164.v1
title: Data for Tan et al, 2018

description: Dataset for Tan et al (2018)
DOI: 10.6084/m9.figshare.5848137
title: Sea surface temperature data

description: netcdf files
DOI: 10.6084/m9.figshare.5848137.v1
title: Sea surface temperature data

description: netcdf files
DOI: 10.6084/m9.figshare.5848131
title: Geostrophic current data

description: netcdf files
DOI: 10.6084/m9.figshare.5848131.v1
title: Geostrophic current data

description: netcdf files
DOI: 10.6084/m9.figshare.5848101
title: Surface winds 2006

description: NetCDF files
DOI: 10.6084/m9.figshare.5848101.v1
title: Surface winds 2006

description: NetCDF files
DOI: 10.6084/m9.figshare.5848089
title: Surface winds 2005

description: Surface wind data for 2005
DOI: 10.15139/s3/co9sfm
title: Deidentified Data Set for Symptom Duration Study

description: Data set for symptom duration study 1) data to recreate heat maps for all patients and by provider assessed severity and 2) symptom duration for all patients and by provider assessed severity
DOI: 10.6084/m9.figshare.5848089.v1
title: Surface winds 2005

description: Surface wind data for 2005
DOI: 10.6084/m9.figshare.5848083
title: Aportaciones al conocimiento de la flora del Cerro Socopó, Serranía de Ciruma, estado Falcón, Venezuela

description: Presetamos una contribución al conocimiento florístico y corológico de seis (6) especies de Angiospermas colectadas en el Cerro Socopó, Serranía de Ciruma, estado Falcón, Venezuela. <br>Los autores agradecemos al Instituto Venezolano de Investigaciones Científicas por facilitar la logística.
DOI: 10.6084/m9.figshare.5848083.v2
title: Aportaciones al conocimiento de la flora del Cerro Socopó, Serranía de Ciruma, estado Falcón, Venezuela

description: Presetamos una contribución al conocimiento florístico y corológico de seis (6) especies de Angiospermas colectadas en el Cerro Socopó, Serranía de Ciruma, estado Falcón, Venezuela. <br>Los autores agradecemos al Instituto Venezolano de Investigaciones Científicas por facilitar la logística.
DOI: 10.6084/m9.figshare.5848083.v1
title: Aportaciones al conocimiento de la flora del la Serranía de Ciruma, Cerro Socopó, estado Falcón, Venezuela

description: Presetamos una contribución al conocimiento florístico y corológico de seis (6) especies de Angiospermas colectadas en la Serranía de Ciruma, Cerro Socopó, estado Falcón, Venezuela. <br>Los autores agradecemos al Instituto Venezolano de Investigaciones Científicas por facilitar la logística.
DOI: 10.6084/m9.figshare.5848077
title: seqs.fna.gz

description: Sequences
DOI: 10.6084/m9.figshare.5848074
title: whale shark gene model predicted on Rtypus_kobe_v1.0

description: GFF file for whale shark gene model predicted on Rtypus_kobe_v1.0
DOI: 10.6084/m9.figshare.5848074.v2
title: whale shark gene model predicted on Rtypus_kobe_v1.0

description: GFF file for whale shark gene model predicted on Rtypus_kobe_v1.0
DOI: 10.6084/m9.figshare.5848074.v1
title: whale shark gene model predicted on Rtypus_kobe_v1.0

description: GFF file for whale shark gene model predicted on Rtypus_kobe_v1.0
DOI: 10.6084/m9.figshare.5848071
title: whale shark coding nucleotide sequences predicted on Rtypus_kobe_v1.0

description: This resource is associated with our original publication https://doi.org/10.1038/s41559-018-0673-5
DOI: 10.6084/m9.figshare.5848071.v1
title: whale shark coding nucleotide sequences predicted on Rtypus_kobe_v1.0

description: This resource is associated with our original publication https://doi.org/10.1038/s41559-018-0673-5
DOI: 10.6084/m9.figshare.5848068
title: whale shark peptide sequences predicted on Rtypus_kobe_v1.0

description: This resource is associated with our original publication https://doi.org/10.1038/s41559-018-0673-5
DOI: 10.6084/m9.figshare.5848062
title: whale shark genome assembly Rtypus_kobe_v1.0 nucleotide sequence file

description: whole genome assembly Rtypus_kobe_v1.0 <br>
DOI: 10.6084/m9.figshare.5848062.v1
title: whale shark genome assembly Rtypus_kobe_v1.0 nucleotide sequence file

description: whole genome assembly Rtypus_kobe_v1.0 <br>