cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/29ff861c21efdd39331a5a3c57705af5
title: Ungulate-Disturbance Interactions in Hemlock Ecosystems at Harvard Forest 2012-2013

description: Densities of ungulates are often associated with recent forest disturbances such as fire, logging and insect outbreaks, as increased resources stimulate tree regeneration, leading to abundant available browse. Despite the often significant role that ungulates play in disturbed forests, surprisingly little is known about ungulate-disturbance interactions, and ungulate herbivory is often excluded from examinations of forest response to disturbance. In the Northeastern United States, a large-scale insect outbreak, the hemlock wooly adelgid (HWA), has begun to have important effects on hemlock forests both directly and indirectly (i.e., by preemptive salvage logging). No studies have examined the interactions of both moose and deer activity with these associated canopy disturbances. Our objectives are twofold: to determine (1) the response of ungulates to varying disturbance types and intensities and (2) the influence of ungulate interactions with canopy disturbance on vegetation, other biota, and ecosystem processes. We will examine the relative abundance of moose and deer in four treatments (2 replicates) at the Hemlock Removal Experiment using three indices of ungulate activity: pellet group density, evidence of past browsing on seedlings and saplings, and the occurrence of animals using game cameras. We will also monitor the response of vegetation to ungulate browsing by sampling woody and herbaceous vegetation in fenced exclosures and paired controls in disturbed and undisturbed plots.
DOI: 10.25573/data.10059542.v15
title: Monthly summary_Sea Surface Temperature

description: Monthly summary of sea surface temperature data collected from near shore temperature sensors at depths ranging from 1m to 20m<br>
DOI: 10.25573/data.10059536.v26
title: Monthly summary_Parque Natural Metropolitano Crane

description: The original station was located on the side of the tower at approximately 25m. Some sensors were later moved to the top of the tower.In 2021 the original crane was dismantled and replaced with a new, 45m crane in Jan. 2022. The temperature and humidity were moved to the top of the crane. An anemometer was mounted near just below the crane boom.
Monthly and daily summaries from Parque Natural Metropolitano (PNM) crane station.<br>

Location: 8.994410°, - 79.543000°
<br>
Parameters: air temperature, relative humidity, wind speed and direction, precipitation, solar radiation (pyranometer)
<br>
Established in 1995, the PNM canopy crane is located at the North Western edge of Panama City, at the eastern edge of the Parque Natural Metropolitano (Metropolitan Nature Park) and is surrounded by 80-year old, lowland semi-deciduous forest. The crane is 42 meters tall.<br>

 
Yearly climate summaries for the Smithsonian Tropical Research Institute's Physical Monitoring Program Parque Natural Metropolitano (PNM) Crane Station. Established in 1995, the PNM canopy crane (8.994410°, - 79.543000°) is located at the North Western edge of Panama City, at the eastern edge of the Parque Natural Metropolitano (Metropolitan Nature Park) and is surrounded by 80-year old, lowland semi-deciduous forest. The original crane was 42 meters tall with a radius of 51 meters.<br>
<br>
In 2021 the original crane was dismantled and replaced with a new, 68m crane in Jan. 2022. The temperature and humidity were moved to the top of the crane. An anemometer was mounted near just below the crane boom.
<br>
DOI: 10.25573/data.10059530.v36
title: Monthly summary_Galeta Station

description: Monthly and daily summary from Galeta Island marine laboratory<br>Location: 9.402742°, -79.860837°<br>Parameters: air temperature, relative humidity, wind speed and direction, precipitation, sea surface temperature, solar radiation (pyranometer)<br><br>Galeta Island Marine Laboratory physical monitoring station established in 1974<br>Galeta station is located 6 km North East of the city of Colon. Established in the 1960’s.
DOI: 10.25573/data.10059518.v36
title: Monthly summary_San Lorenzo Crane

description: Monthly and daily summaires from the San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Parameters: air temperature, relative humidity, wind speed and 
direction, precipitation, solar radiation 
(pyranometer)<br>Established
 in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is 
located approximately 11 km South West from the city of Colon, in the 
middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) 
and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.25573/data.10059476.v28
title: Monthly summary_Fortuna Station

description: Monthly and daily summary from the Fortuna Station (Centro de Investigaciones Jorge L. Arauz)<br>Location: 8° 43.340'N, 82° 14.241'W<br>Parameters: air temperature, wind speed and 
direction, precipitation, solar radiation 
(pyranometer)<br>Located in the highlands of the Chiriqui Province, in western Panama.There are three sensor locations: north clearing, south clearing, and a 15m tower.<br>
DOI: 10.25573/data.10059470.v34
title: Monthly summary_Culebra Station Tower

description: Punta Culebra Nature Center meteorological station. Established in 2002. <br>Location: 8.910718°N, -79.528919°<br>Parameters: air temperature, relative humidity, wind speed and 
direction, precipitation, solar radiation 
(pyranometer)
DOI: 10.25573/data.10059467.v36
title: Monthly summary_Agua Salud, Celestino Tower

description: Monthly and daily summaries from the Agua Salud Celestino Tower. <br>Location 9.21142N, 79.72656W<br>Parameters: air temperature, relative humidity, wind speed and 
direction, precipitation, solar radiation 
(pyranometer, photosynthetically active radiation), soil moisture, net radiation, air pressure, evapotranspiration<br><br>Established
 in 2015 and is located at the eastern edge of the Soberania Nation 
Park, in an area of pastures and forest patches. The tower is 40ft 
(12.2m) tall
DOI: 10.25573/data.10059464.v39
title: Monthly summary_Bocas Station

description: Monthly and daily summary from the Bocas del Toro Research StationLocation: 9.351553°, -82.256565°<br>Parameters: air temperature, relative humidity, wind speed and 
direction, precipitation, sea surface temperature, solar radiation 
(pyranometer), air pressure, dissolved oxygen, turbidity, salinity, pH<br><br>Sensors
 located on a platform located approximately 60m from the end of the 
station’s dock. Platform includes meteorological tower, Sea Surface 
Temperature probe and several sea level sensors. The current platform 
was built in 2012 to replace the original platform.
DOI: 10.25573/data.10059461.v37
title: Monthly summary_AVA Tower

description: Barro Colorado Island, AVA tower.Two Sensors: North and South<br>Parameters: air temperature, relative humidity, wind speed and 
direction, precipitation, solar radiation 
(pyranometer, photosynthetically active radiation)<br>Established in Mar, 2011 as part of the ForestGEO Tropical Ecology, Assessment and Monitoring (TEAM) project.<br>The original tower was Located near the center of the island at the north west corner of the 50ha plot (9.1568°, -79.8486°).<br>In 2018 this tower was struck by a tree fall and rendered unusable.<br>In Feb. 2019 a new 45m tower was build close by (9.1568°, -79.8486°). <br><br><br>
DOI: 10.25573/data.10059458.v35
title: Monthly Summary_BCI, Vertical

description: Monthly and daily summary from Barro Colorado Island (BCI). Data organized in vertical format for long-term trend analysisLocation 9°9'42.36"N, 79°50'15.67"WLutz catchment is a 9.73ha protected watershed on BCI. The Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48mThe data from 48m should be considered a separate data series from the data at 42m. Wind speed is significantly higher at 48m due to the distance to the top of the canopy. The Clearing is a small, open area surrounded by forest and some buildings. Station established in 1972. Consists of a Stevenson screen with max/min thermometers and air pressure sensor. Temperature/humidity sensor, rain gauge and evaporation sensors are located at various locations around the screen.<br>Parameters: air temperature, relative humidity, wind speed and direction, precipitation, sea surface temperature, solar radiation (pyranometer), air pressure, soil moisture, runoff, potential evapotranspiration, wet/dry season starting dates
DOI: 10.25573/data.10059455.v34
title: Monthly Summary_BCI, horizontal

description: Monthly and daily summary from Barro Colorado Island (BCI). Data organized in horizontal format for seasonal and inter-year comparisons<br>Location 9°9'42.36"N, 79°50'15.67"W<br>Parameters: air temperature, relative humidity, wind speed and 
direction, precipitation, sea surface temperature, solar radiation 
(pyranometer), air pressure, soil moisture, runoff, potential evapotranspiration, wet/dry season starting dates<br><br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>The data from 48m should be considered a separate data series from the 
data at 42m. Wind speed is significantly higher at 48m due to the 
distance to the top of the canopy.<br>The Clearing is a small, open area surrounded by forest and some 
buildings. Station established in 1972. Consists of a Stevenson screen 
with max/min thermometers and air pressure sensor. Temperature/humidity 
sensor, rain gauge and evaporation sensors are located at various 
locations around the screen.
DOI: 10.6073/pasta/367f5ce27ac6083cbf65b7c238e956dc
title: Butterfly, Dragonfly and Damselfly Species at Harvard Forest 2015

description: I report on preliminary observations of butterflies in small meadows in the vicinity of “Harvard Farm” (formerly Petersham Country Club) in Petersham, MA, from 16-20 July 2015. I sampled butterflies at 10 locations over five days, visiting some areas twice. I documented (with digital photography) a total of 17 recognizable species/morpho-species, as well as 2-8 additional “grass skippers” which could not be identified to species. Initially I had planned to conduct a more organized survey, but most of the property had been grazed by the time I arrived in mid-July. This, combined with the late start date, meant that flowers – and nearly all butterflies – were absent at the Harvard Farm property during my visit. Instead, I opted to opportunistically sample several un-grazed meadows in the Petersham area, including North Common Meadow near the center of town and small meadows on Harvard Forest property, to develop a species list and photographic database of as many local butterflies as possible. From these surveys, the most numerous species were clouded/orange sulfur (Colias spp.; 34 individuals observed), followed by great spangled fritillary (Speyeria cybele; n = 32) and unidentified grass-skippers (various genera; n = 32). Moderately common species (n = 8-12) included Common wood-nymph (Cercyonis pegala), American copper (Lycaena phlaeas) and cabbage white (Pieris rapae); fewer than 4 individuals were recorded of: black/spicebush swallowtail (Papilio sp.), banded hairstreak (Satyrium calanus), gray hairstreak (Strymon melinus), azure (Celastrina ladon), eastern tailed-blue (Everes comyntas), pearl crescent (Phycioides tharos), eastern comma (Polygonia comma), Appalachian brown (Satyodes appalachia), northern pearly-eye (Enodia anthedon), and silver-spotted skipper (Epargyreus claras). These observations should be taken as preliminary, but may serve as a list of the most common and conspicuous butterfly taxa during mid-summer in the Petersham area, and could inform study design and focal species lists for future projects in and around Harvard Forest.
DOI: 10.6073/pasta/4110c7059a9219461c3a088a0eef6477
title: Academics for Land Protection in New England (ALPINE) GIS Data 2015-2018

description: Academics for Land Protection in New England (ALPINE) is a network of academic institutions committed to increasing the pace of land protection in New England to address the region’s environmental challenges and to support nature and people. ALPINE seeks to expand the role that academic institutions play in conserving the New England landscape by sharing experiences and resources among faculty and staff, students, administrations, and alumni.
 This dataset contains point locations of colleges that are participants in ALPINE and parcels of natural land owned by participating schools who submitted data to the ALPINE coordinator.
DOI: 10.6084/m9.figshare.7117808
title: Periodic oscillations in mitochondrial function under oxidative stress. SOD2 concentrations of 0.013 mM

description: These oscillatory mitochondrial time series under conditions of oxidative stress are analyzed in detail in Kembro et al. 2018. Mitochondrial chaotic dynamics: Redox-energetic behavior at the edge of stability. Sci. Rep. (in press)Mitochondrial model used was described in the project overview and in detail (Kembro et al. 2013. Biophys J 104(2):332-343; Kembro et al., 2014. Front Physiol 5:257).<b>Analytical methods. </b>Numerical integration of the ME-R model equations was performed with MatCont 2.4 in MATLAB 7.1, until steady-state solutions were obtained (i.e., when the magnitude of each time derivative was -10). Time series with duration of at least 6e<sup>6</sup> ms were constructed by numerical integration of model equations. To allow transient states to vanish, the system was computed during a time lapse of 2 e<sup>8</sup> ms. All studies were performed using the parameter setting optimized in our previous work (Kembro et al. 2013. Biophys J 104(2):332-343; Kembro et al., 2014. Front Physiol 5:257), with ADPm = 0.01mM, i.e. consistent with energized mitochondria under state 4 respiration.The two .txt file represents the time reference and the time series of variables output of the model, in order from left to right column: 1) Mitochondrial Ca+;2) Mitochondrial ADP; 3) Membrane potential; 4)Mitocondrial NADH; 5) Mitochondrial H+; 6) Mitochondrial Phosfate, Pi; 7) Isocitrate; 8) a-ketoglutarate; 9) Succinyl CoA; 10) Succinate; 11) Fumarate; 12) Malate; 13) Oxaloacetate; 14) NADPH; 15) Mitochondrial superoxide; 16) Extramitochondrial superoxide; 17) Mitochondrial hydrogen peroxide; 18) Extramitochondrial hydrogen peroxide; 19) Mitochondrial GSH; 20) Extramitochondrial GSH; 21)Mitochondrial GSSG; 22) Mitochondrial TrxSH2; 23) ExtramitochondrialTrxSH; 24)Mitochondrial PSSGm; 25) Extramitochondrial PSSG.Original code of the model has been included<br>The parameter settings were:Model-simulated time series were calculated with 0.013 mM of SOD2, Shunt=0.04, SOD1 9.7 10<sup>-5</sup> mM. External superoxide perturbation: amplitude=1 10<sup>-7</sup> mM, period =30 s.<br>
DOI: 10.6084/m9.figshare.7117808.v2
title: Periodic oscillations in mitochondrial function under oxidative stress. SOD2 concentrations of 0.013 mM

description: These oscillatory mitochondrial time series under conditions of oxidative stress are analyzed in detail in Kembro et al. 2018. Mitochondrial chaotic dynamics: Redox-energetic behavior at the edge of stability. Sci. Rep. (in press)Mitochondrial model used was described in the project overview and in detail (Kembro et al. 2013. Biophys J 104(2):332-343; Kembro et al., 2014. Front Physiol 5:257).<b>Analytical methods. </b>Numerical integration of the ME-R model equations was performed with MatCont 2.4 in MATLAB 7.1, until steady-state solutions were obtained (i.e., when the magnitude of each time derivative was -10). Time series with duration of at least 6e<sup>6</sup> ms were constructed by numerical integration of model equations. To allow transient states to vanish, the system was computed during a time lapse of 2 e<sup>8</sup> ms. All studies were performed using the parameter setting optimized in our previous work (Kembro et al. 2013. Biophys J 104(2):332-343; Kembro et al., 2014. Front Physiol 5:257), with ADPm = 0.01mM, i.e. consistent with energized mitochondria under state 4 respiration.The two .txt file represents the time reference and the time series of variables output of the model, in order from left to right column: 1) Mitochondrial Ca+;2) Mitochondrial ADP; 3) Membrane potential; 4)Mitocondrial NADH; 5) Mitochondrial H+; 6) Mitochondrial Phosfate, Pi; 7) Isocitrate; 8) a-ketoglutarate; 9) Succinyl CoA; 10) Succinate; 11) Fumarate; 12) Malate; 13) Oxaloacetate; 14) NADPH; 15) Mitochondrial superoxide; 16) Extramitochondrial superoxide; 17) Mitochondrial hydrogen peroxide; 18) Extramitochondrial hydrogen peroxide; 19) Mitochondrial GSH; 20) Extramitochondrial GSH; 21)Mitochondrial GSSG; 22) Mitochondrial TrxSH2; 23) ExtramitochondrialTrxSH; 24)Mitochondrial PSSGm; 25) Extramitochondrial PSSG.Original code of the model has been included<br>The parameter settings were:Model-simulated time series were calculated with 0.013 mM of SOD2, Shunt=0.04, SOD1 9.7 10<sup>-5</sup> mM. External superoxide perturbation: amplitude=1 10<sup>-7</sup> mM, period =30 s.<br>
DOI: 10.6084/m9.figshare.7117808.v1
title: Periodic oscillations in mitochondrial function under oxidative stress. SOD2 concentrations of 0.013 mM

description: These oscillatory mitochondrial time series under conditions of oxidative stress are analyzed in detail in Kembro et al. 2018. Mitochondrial chaotic dynamics: Redox-energetic behavior at the edge of stability. Sci. Rep. (in press)<br>Mitochondrial model used was described in the project overview and in detail (Kembro et al. 2013. Biophys J 104(2):332-343; Kembro et al., 2014. Front Physiol 5:257).<br><b>Analytical methods. </b>Numerical
integration of the ME-R model equations was performed with MatCont 2.4 in MATLAB 7.1, until steady-state solutions were obtained (i.e., when the magnitude of each time derivative was -10). Time series with
duration of at least 6e<sup>6</sup> ms were constructed by numerical
integration of model equations. To allow transient states to vanish, the system
was computed during a time lapse of 2 e<sup>8</sup> ms. All studies were performed
using the parameter setting optimized in our previous work (Kembro et al. 2013. Biophys J 104(2):332-343; Kembro et al., 2014. Front Physiol 5:257), with ADPm = 0.01mM, i.e. consistent with energized mitochondria under state 4 respiration.The two .txt file represents the time reference and the time series of variables output of the model, in order from left to right column: 1) Mitochondrial Ca+;2) Mitochondrial ADP; 3) Membrane potential; 4)Mitocondrial NADH; 5) Mitochondrial H+; 6) Mitochondrial Phosfate, Pi; 7) Isocitrate; 8) a-ketoglutarate; 9) Succinyl CoA; 10) Succinate; 11) Fumarate; 12) Malate; 13) Oxaloacetate; 14) NADPH; 15) Mitochondrial superoxide; 16) Extramitochondrial superoxide; 17) Mitochondrial hydrogen peroxide; 18) Extramitochondrial hydrogen peroxide; 19) Mitochondrial GSH; 20) Extramitochondrial GSH; 21)Mitochondrial GSSG; 22) Mitochondrial TrxSH2; 23) ExtramitochondrialTrxSH; 24)Mitochondrial PSSGm; 25) Extramitochondrial PSSG.<br>The parameter settings were: Model-simulated time series were calculated with 0.013 mM of SOD2, Shunt=0.04, SOD1
9.7 10<sup>-5</sup> mM. External superoxide perturbation: amplitude=1 10<sup>-7</sup>
mM, period =30 s.
DOI: 10.6084/m9.figshare.24549643
title: Table S1 from "An annotated checklist of clearwing moths (Lepidoptera: Sesiidae) in British Columbia and Yukon Territory" published in the Journal of the Entomological Society of British Columbia

description: An annotated checklist of clearwing moths (Lepidoptera: Sesiidae) in British Columbia and Yukon TerritoryTyler D. Nelson, Kristoferson Cu, Joel F. Gibson, Karen M. Needham, Esme John, Gary J.R. Judd, and Chandra E. MoffatThe clearwing moths (Lepidoptera: Sesiidae) are infrequently documented wood-boring insects. Some species achieve pest status in managed ecosystems across North America, threatening agricultural and forestry sectors. The invasive apple clearwing moth, <i>Synanthedon myopaeformis</i> (Borkhausen), is one such pest species; its larvae damage domesticated apple (<i>Malus </i>spp.) (Rosaceae) trees in the southern reaches of British Columbia, Canada. Future management of this pest with classical biological control requires an understanding of ‘non-target’ sesiid distribution. To that end, we have produced an annotated checklist of species distribution and host-plant records in British Columbia and Yukon Territory, Canada. We report a total of 22 sesiid species in these two jurisdictions, based on more than 2000 records from entomological museums, online community science databases, and the primary literature. This annotated checklist will be used to inform the biological control programme of <i>S. myopaeformis </i>but will also be a valuable resource for understanding sesiid diversity in western Canada.
DOI: 10.6084/m9.figshare.24549643.v2
title: Table S1 from "An annotated checklist of clearwing moths (Lepidoptera: Sesiidae) in British Columbia and Yukon Territory" published in the Journal of the Entomological Society of British Columbia

description: An annotated checklist of clearwing moths (Lepidoptera: Sesiidae) in British Columbia and Yukon TerritoryTyler D. Nelson, Kristoferson Cu, Joel F. Gibson, Karen M. Needham, Esme John, Gary J.R. Judd, and Chandra E. MoffatThe clearwing moths (Lepidoptera: Sesiidae) are infrequently documented wood-boring insects. Some species achieve pest status in managed ecosystems across North America, threatening agricultural and forestry sectors. The invasive apple clearwing moth, <i>Synanthedon myopaeformis</i> (Borkhausen), is one such pest species; its larvae damage domesticated apple (<i>Malus </i>spp.) (Rosaceae) trees in the southern reaches of British Columbia, Canada. Future management of this pest with classical biological control requires an understanding of ‘non-target’ sesiid distribution. To that end, we have produced an annotated checklist of species distribution and host-plant records in British Columbia and Yukon Territory, Canada. We report a total of 22 sesiid species in these two jurisdictions, based on more than 2000 records from entomological museums, online community science databases, and the primary literature. This annotated checklist will be used to inform the biological control programme of <i>S. myopaeformis </i>but will also be a valuable resource for understanding sesiid diversity in western Canada.
DOI: 10.6084/m9.figshare.24549643.v1
title: Supplemental Table 1 from "An annotated checklist of clearwing moths (Lepidoptera: Sesiidae) in British Columbia and Yukon Territory" published in the Journal of the Entomological Society of British Columbia

description: An annotated checklist of clearwing moths (Lepidoptera: Sesiidae) in British Columbia and Yukon TerritoryTyler D. Nelson, Kristoferson Cu, Joel F. Gibson, Karen M. Needham, Esme John, Gary J.R. Judd, and Chandra E. MoffatThe clearwing moths (Lepidoptera: Sesiidae) are infrequently documented wood-boring insects. Some species achieve pest status in managed ecosystems across North America, threatening agricultural and forestry sectors. The invasive apple clearwing moth, <i>Synanthedon myopaeformis</i> (Borkhausen), is one such pest species; its larvae damage domesticated apple (<i>Malus </i>spp.) (Rosaceae) trees in the southern reaches of British Columbia, Canada. Future management of this pest with classical biological control requires an understanding of ‘non-target’ sesiid distribution. To that end, we have produced an annotated checklist of species distribution and host-plant records in British Columbia and Yukon Territory, Canada. We report a total of 22 sesiid species in these two jurisdictions, based on more than 2000 records from entomological museums, online community science databases, and the primary literature. This annotated checklist will be used to inform the biological control programme of <i>S. myopaeformis </i>but will also be a valuable resource for understanding sesiid diversity in western Canada.