cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14782657
title: Additional file 3 of Utilizing single-cell RNA sequencing for analyzing the characteristics of PBMC in patients with Kawasaki disease

description: Additional file 3: Table S3. Function enrichment in B cell and four T cells.
DOI: 10.6084/m9.figshare.14782657.v1
title: Additional file 3 of Utilizing single-cell RNA sequencing for analyzing the characteristics of PBMC in patients with Kawasaki disease

description: Additional file 3: Table S3. Function enrichment in B cell and four T cells.
DOI: 10.6084/m9.figshare.14782651
title: Additional file 1 of Utilizing single-cell RNA sequencing for analyzing the characteristics of PBMC in patients with Kawasaki disease

description: Additional file 1: Table S1. Statistical table of gene expression in single cell RNA-seq.
DOI: 10.25582/data.2023-01.2721098/2292650
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.11113874
title: A new Eocene cylindrodontid rodent from the Erlian Basin (Nei Mongol, China) and its implications for phylogeny and biochronology

description: We report a new early–middle Eocene cylindrodontid rodent, <i>Gobiocylindrodon ulausuensis</i>, gen. et sp. nov., from the Ula Usu West locality, Erlian Basin, Nei Mongol, China. <i>Gobiocylindrodon ulausuensis</i> is morphologically more primitive than known later cylindrodontids in having lower-crowned molars, less-rounded upper molars in occlusal view, a more oblique hypolophid on p4, a slightly anterolabially extended hypoconid on m1–3, and a narrow posterosinusid posteriorly and a broad mesosinusid anteriorly on the lower cheek teeth. The lower incisor enamel of <i>G. ulausuensis</i> is pauciserial. Our phylogenetic analysis of a data matrix including 14 taxa and 40 morphological characters reveals that <i>G. ulausuensis</i> is a basal cylindrodontid. <i>Gobiocylindrodon ulausuensis</i> casts new light on early cylindrodontid evolution in Asia and provides new evidence for mammalian dispersals between Asia and North America during the early–middle Eocene. <i>Gobiocylindrodon</i>-bearing strata are probably Arshantan in age.
DOI: 10.6084/m9.figshare.11113874.v1
title: A new Eocene cylindrodontid rodent from the Erlian Basin (Nei Mongol, China) and its implications for phylogeny and biochronology

description: We report a new early–middle Eocene cylindrodontid rodent, <i>Gobiocylindrodon ulausuensis</i>, gen. et sp. nov., from the Ula Usu West locality, Erlian Basin, Nei Mongol, China. <i>Gobiocylindrodon ulausuensis</i> is morphologically more primitive than known later cylindrodontids in having lower-crowned molars, less-rounded upper molars in occlusal view, a more oblique hypolophid on p4, a slightly anterolabially extended hypoconid on m1–3, and a narrow posterosinusid posteriorly and a broad mesosinusid anteriorly on the lower cheek teeth. The lower incisor enamel of <i>G. ulausuensis</i> is pauciserial. Our phylogenetic analysis of a data matrix including 14 taxa and 40 morphological characters reveals that <i>G. ulausuensis</i> is a basal cylindrodontid. <i>Gobiocylindrodon ulausuensis</i> casts new light on early cylindrodontid evolution in Asia and provides new evidence for mammalian dispersals between Asia and North America during the early–middle Eocene. <i>Gobiocylindrodon</i>-bearing strata are probably Arshantan in age.
DOI: 10.25582/data.2023-01.2720824/2292651
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721903/2292652
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721259/2292653
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721260/2292654
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721531/2292655
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721057/2292656
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721090/2292657
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721424/2292658
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721437/2292659
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.7968215.v1
title: Additional file 10: of Development of a core SNP arrays based on the KASP method for molecular breeding of rice

description: Table S10. Subset 8 of SNPs from Zhao et al. (2011) & Yonemaru et al. (2014). (XLSX 12 kb)
DOI: 10.25582/data.2023-01.2721133/2292660
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721200/2292661
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721641/2292662
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721124/2292663
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721536/2292664
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721652/2292665
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721244/2292666
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.7968245
title: Additional file 3: of Development of a core SNP arrays based on the KASP method for molecular breeding of rice

description: Table S3. Subset 1 of SNPs from Kurokawa et al. (2016). (XLSX 12 kb)
DOI: 10.25582/data.2023-01.2721617/2292667
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.7968251
title: Additional file 4: of Development of a core SNP arrays based on the KASP method for molecular breeding of rice

description: Table S4. Subset 2 of SNPs from Kurokawa et al. (2016). (XLSX 13 kb)
DOI: 10.6084/m9.figshare.7968251.v1
title: Additional file 4: of Development of a core SNP arrays based on the KASP method for molecular breeding of rice

description: Table S4. Subset 2 of SNPs from Kurokawa et al. (2016). (XLSX 13 kb)
DOI: 10.25582/data.2023-01.2721113/2292668
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.7968254.v1
title: Additional file 5: of Development of a core SNP arrays based on the KASP method for molecular breeding of rice

description: Table S5. Subset 3 of SNPs. (XLSX 12 kb)
DOI: 10.25582/data.2023-01.2721132/2292669
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721149/2292670
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721061/2292671
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721543/2292672
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.7968275
title: Additional file 9: of Development of a core SNP arrays based on the KASP method for molecular breeding of rice

description: Table S9. Subset 7 of SNPs. (XLSX 12 kb)
DOI: 10.25582/data.2023-01.2721164/2292673
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721906/2292674
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721552/2292675
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721620/2292676
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721341/2292677
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721619/2292678
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.18978380
title: Identification of a ferroptosis-related gene signature for predicting the prognosis of cholangiocarcinoma

description: Cholangiocarcinoma (CCA) is a highly intractable malignancy with poor prognosis. Ferroptosis, a newly explored type of programmed cell death, plays a critical role in the initiation and progression of a tumor. Herein, we aimed to identify a ferroptosis-related risk model to evaluate the prognosis of CCA. Differentially expressed genes (DEGs) were retrieved from three GEO cohorts. Univariate and LASSO analysis were employed to build a ferroptosis-related gene signature. Next, the predictive value was assessed in a training and a validation cohort. Metascape Online analysis, ESTIMATE and CIBERSORT algorithms, and ssGSEA were employed to perform the functional analysis between different risk groups. Finally, the expression of prognostic genes was validated with RT-qPCR. We identified 51 differentially expressed ferroptosis genes and established the prognostic signature containing five ferroptosis-related genes. The K-M curves and the ROC curves revealed a favorable predictive efficacy of the prognostic signature. Functional enrichment analysis indicated that immune-related responses were greatly enriched between different risk groups. Five prognostic genes were also differentially expressed in CCA cell lines. We developed a novel ferroptosis-related gene signature for CCA with high predictive accuracy. The analysis of the immune infiltration status may provide a potential therapeutic alternative to CCA.
DOI: 10.25582/data.2023-01.2721473/2292679
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721234/2292680
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721110/2292681
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721548/2292682
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721384/2292683
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721211/2292684
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721539/2292685
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721187/2292686
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721251/2292687
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721327/2292688
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721064/2292689
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721490/2292690
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721097/2292691
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721499/2292692
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721217/2292693
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721096/2292694
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721537/2292695
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721397/2292696
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721413/2292697
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721423/2292698
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.16879937
title: Additional file 5 of Cytotoxic lymphocytes-related gene ITK from a systematic CRISPR screen could predict prognosis of ovarian cancer patients with distant metastasis

description: Additional file 5: Table S4. Key genes correlated with ITK.
DOI: 10.6084/m9.figshare.16879916
title: Additional file 1 of Cytotoxic lymphocytes-related gene ITK from a systematic CRISPR screen could predict prognosis of ovarian cancer patients with distant metastasis

description: Additional file 1: Table S1. Basical characteristics.
DOI: 10.6084/m9.figshare.16879916.v1
title: Additional file 1 of Cytotoxic lymphocytes-related gene ITK from a systematic CRISPR screen could predict prognosis of ovarian cancer patients with distant metastasis

description: Additional file 1: Table S1. Basical characteristics.
DOI: 10.25582/data.2023-01.2721142/2292699
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721319/2292700
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.16879925.v1
title: Additional file 4 of Cytotoxic lymphocytes-related gene ITK from a systematic CRISPR screen could predict prognosis of ovarian cancer patients with distant metastasis

description: Additional file 4: Table S3. Correlation analysis among the 4751 genes.
DOI: 10.25582/data.2023-01.2721469/2292701
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.16879925
title: Additional file 4 of Cytotoxic lymphocytes-related gene ITK from a systematic CRISPR screen could predict prognosis of ovarian cancer patients with distant metastasis

description: Additional file 4: Table S3. Correlation analysis among the 4751 genes.
DOI: 10.25582/data.2023-01.2721444/2292702
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721517/2292703
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721449/2292704
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721245/2292705
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721240/2292706
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721379/2292707
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721265/2292708
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721054/2292709
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721158/2292710
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721456/2292711
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721549/2292712
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721609/2292713
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721250/2292714
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721172/2292715
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.14782773.v1
title: Additional file 2 of RNAseq and quantitative proteomic analysis of Dictyostelium knock-out cells lacking the core autophagy proteins ATG9 and/or ATG16

description: Additional file 2.
DOI: 10.25582/data.2023-01.2721495/2292716
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.12687281
title: Sr isotope, magnetic and clay data for the paper "Fluid migration and widespread remagnetization in the Dabashan fold and thrust belts, China"

description: To better understand the processes of fluid migration in orogenic zones and associated chemical remagnetization, we have conducte detailed magnetic, petrographic, and Strontium (Sr) isotope studies in an important orogenic belt of China, the Jurassic Dabashan fold and thrust belts. The result of this study has been submited to the Journal of Geophysical Research-Solid Earth. These materials contain three data tables for the 87Sr/86Sr (Table S1), clay data (Table S2), and directions of determined individual remanent magnetizations which are important for the Figure 4, 10 and S1.
DOI: 10.25582/data.2023-01.2721632/2292717
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721178/2292718
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721117/2292719
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.10590218
title: Fumigant toxicity of eleven Chinese herbal essential oils against an ectoparasitic mite (<i>Varroa destructor</i>) of the honey bee (<i>Apis mellifera</i>)

description: The health status of the honey bee <i>Apis mellifera</i> has been challenged globally by the ubiquitous ectoparasitic mite <i>Varroa destructor</i> over the past several decades. The resistance of the mite to and residue accumulation of the traditional acaricidal treatment call for more natural and safer alternatives to control this parasite in colonies. Essential oils originating from plant foliage are considered to be a potential substitute. In this study, we evaluated the fumigant activities of eleven essential oils derived from Chinese crude medicines. Appropriate dosages that did not severely harm honey bees were applied in a toxicity screening test of <i>V. destructor</i> mites. Six essential oils had significant acaricidal activities against the mites, and Odoriferous Rosewood oil and Fennel oil caused more than 65% <i>V. destructor</i> mortality. Meanwhile, the fumigant toxicity of all of the essential oils on adult honey bee workers was not significantly different from that of controls. We then measured the selectivity indexes of the six essential oils mentioned above by determining the LD<sub>50</sub> values for honey bees and for <i>V. destructor</i> mites. Considering both the toxicity to the bees and to the mites, Odoriferous Rosewood oil and Fennel oil showed great potential for varroacidal application as a fumigant agent. This study identified new essential oils with acaricidal properties that might contribute to mitigating the poor health status of <i>A. mellifera</i> colonies due to <i>V. destructor</i> infestation.
DOI: 10.25582/data.2023-01.2721197/2292720
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.10590218.v1
title: Fumigant toxicity of eleven Chinese herbal essential oils against an ectoparasitic mite (<i>Varroa destructor</i>) of the honey bee (<i>Apis mellifera</i>)

description: The health status of the honey bee <i>Apis mellifera</i> has been challenged globally by the ubiquitous ectoparasitic mite <i>Varroa destructor</i> over the past several decades. The resistance of the mite to and residue accumulation of the traditional acaricidal treatment call for more natural and safer alternatives to control this parasite in colonies. Essential oils originating from plant foliage are considered to be a potential substitute. In this study, we evaluated the fumigant activities of eleven essential oils derived from Chinese crude medicines. Appropriate dosages that did not severely harm honey bees were applied in a toxicity screening test of <i>V. destructor</i> mites. Six essential oils had significant acaricidal activities against the mites, and Odoriferous Rosewood oil and Fennel oil caused more than 65% <i>V. destructor</i> mortality. Meanwhile, the fumigant toxicity of all of the essential oils on adult honey bee workers was not significantly different from that of controls. We then measured the selectivity indexes of the six essential oils mentioned above by determining the LD<sub>50</sub> values for honey bees and for <i>V. destructor</i> mites. Considering both the toxicity to the bees and to the mites, Odoriferous Rosewood oil and Fennel oil showed great potential for varroacidal application as a fumigant agent. This study identified new essential oils with acaricidal properties that might contribute to mitigating the poor health status of <i>A. mellifera</i> colonies due to <i>V. destructor</i> infestation.
DOI: 10.25582/data.2023-01.2721561/2292721
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721390/2292722
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721268/2292723
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721051/2292724
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721126/2292725
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721220/2292726
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721169/2292727
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721230/2292728
title: Data for EMSL Project 60066 from January 2023
DOI: 10.25582/data.2023-01.2721389/2292729
title: Data for EMSL Project 60066 from January 2023
DOI: 10.6084/m9.figshare.16879922
title: Additional file 3 of Cytotoxic lymphocytes-related gene ITK from a systematic CRISPR screen could predict prognosis of ovarian cancer patients with distant metastasis

description: Additional file 3: Table S2. All genes ttest result between Regional and Unregional groups.
DOI: 10.6084/m9.figshare.14782773
title: Additional file 2 of RNAseq and quantitative proteomic analysis of Dictyostelium knock-out cells lacking the core autophagy proteins ATG9 and/or ATG16

description: Additional file 2.
DOI: 10.6084/m9.figshare.16879922.v1
title: Additional file 3 of Cytotoxic lymphocytes-related gene ITK from a systematic CRISPR screen could predict prognosis of ovarian cancer patients with distant metastasis

description: Additional file 3: Table S2. All genes ttest result between Regional and Unregional groups.
DOI: 10.6084/m9.figshare.16863937
title: Additional file 1 of Using multi-layer perceptron to identify origins of replication in eukaryotes via informative features

description: Additional file 1. PseKNC accuracy display when K changes.
DOI: 10.6084/m9.figshare.16863682
title: Additional file 1 of A citizen science-based survey of avian mortality focusing on haemosporidian infections in wild passerine birds

description: Additional file 1. Case details for all bird carcasses confirmed positive for haemosporidian parasites by PCR and sequencing.
DOI: 10.5517/ccdc.csd.cc27nxnh
title: CCDC 2075687: Experimental Crystal Structure Determination

description: Related Article: Xiaoping Hu, Peizhuo Lv, Ninghui Zhang, Yuanhong Liu|2021|Org.Lett.|23|7949|doi:10.1021/acs.orglett.1c02957
DOI: 10.5517/ccdc.csd.cc26rrj8
title: CCDC 2048620: Experimental Crystal Structure Determination

description: Related Article: Xiaoping Hu, Peizhuo Lv, Ninghui Zhang, Yuanhong Liu|2021|Org.Lett.|23|7949|doi:10.1021/acs.orglett.1c02957
DOI: 10.5517/ccdc.csd.cc26rrk9
title: CCDC 2048621: Experimental Crystal Structure Determination

description: Related Article: Xiaoping Hu, Peizhuo Lv, Ninghui Zhang, Yuanhong Liu|2021|Org.Lett.|23|7949|doi:10.1021/acs.orglett.1c02957
DOI: 10.5517/ccdc.csd.cc26rrlb
title: CCDC 2048622: Experimental Crystal Structure Determination

description: Related Article: Xiaoping Hu, Peizhuo Lv, Ninghui Zhang, Yuanhong Liu|2021|Org.Lett.|23|7949|doi:10.1021/acs.orglett.1c02957
DOI: 10.5281/zenodo.5594740
title: Diversity and compositional changes in the gut microbiota of wild and captive vertebrates: a meta-analysis

description: Bioinformatic code, data files, raw figures and data accessibility table associated to the manuscript "Diversity and compositional changes in the gut microbiota of wild and captive vertebrates: a meta-analysis".
DOI: 10.5281/zenodo.5594739
title: Diversity and compositional changes in the gut microbiota of wild and captive vertebrates: a meta-analysis

description: Bioinformatic code, data files, raw figures and data accessibility table associated to the manuscript "Diversity and compositional changes in the gut microbiota of wild and captive vertebrates: a meta-analysis".
DOI: 10.34740/kaggle/dsv/2735153
title: CytoImageNet