cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19194632
title: Supplementary File 4.fasta from Novel protein from larval sponge cells, Ilborin, is related to energy turnover, calcium binding and is conserved among marine invertebrates

description: Sponges (phylum Porifera) are early-branching animals, whose outwardly simple body plan is underlain by a complex genetic repertoire. The transition from a mobile larva to an attached filter-feeding organism occurs by metamorphosis, a process accompanied by a radical change of the body plan and cell transdifferentiation. The continuity between larval cells and adult tissues is still obscure. In a previous study, we have produced polyclonal antibodies against the major protein of the flagellated cells covering the larva of the sponge <i>Halisarca dujardinii</i>, used them to trace the fate of these cells and shown that the larval flagellated cells transdifferentiate into the choanocytes. In the present work, we identified the sequence of this novel protein, which we named Ilborin. A search in the open databases showed that multiple orthologues of the newly identified protein were present in sponges, cnidarians, flatworms, ctenophores and echinoderms, but none of them has been described yet. Ilborin has two conservative domains: triosephosphate isomerase-barrel, which has enzymatic activity against macroergic compounds, and canonical EF-hand, which binds calcium. mRNA of Ilborin is expressed in the larval flagellated cells. We suggest that the new protein is involved in the calcium-mediated regulation of energy metabolism, whose activation precedes metamorphosis.
DOI: 10.6084/m9.figshare.19194632.v1
title: Supplementary File 4.fasta from Novel protein from larval sponge cells, Ilborin, is related to energy turnover, calcium binding and is conserved among marine invertebrates

description: Sponges (phylum Porifera) are early-branching animals, whose outwardly simple body plan is underlain by a complex genetic repertoire. The transition from a mobile larva to an attached filter-feeding organism occurs by metamorphosis, a process accompanied by a radical change of the body plan and cell transdifferentiation. The continuity between larval cells and adult tissues is still obscure. In a previous study, we have produced polyclonal antibodies against the major protein of the flagellated cells covering the larva of the sponge <i>Halisarca dujardinii</i>, used them to trace the fate of these cells and shown that the larval flagellated cells transdifferentiate into the choanocytes. In the present work, we identified the sequence of this novel protein, which we named Ilborin. A search in the open databases showed that multiple orthologues of the newly identified protein were present in sponges, cnidarians, flatworms, ctenophores and echinoderms, but none of them has been described yet. Ilborin has two conservative domains: triosephosphate isomerase-barrel, which has enzymatic activity against macroergic compounds, and canonical EF-hand, which binds calcium. mRNA of Ilborin is expressed in the larval flagellated cells. We suggest that the new protein is involved in the calcium-mediated regulation of energy metabolism, whose activation precedes metamorphosis.
DOI: 10.6084/m9.figshare.19194638.v1
title: Supplementary File 3.fasta from Novel protein from larval sponge cells, Ilborin, is related to energy turnover, calcium binding and is conserved among marine invertebrates

description: Sponges (phylum Porifera) are early-branching animals, whose outwardly simple body plan is underlain by a complex genetic repertoire. The transition from a mobile larva to an attached filter-feeding organism occurs by metamorphosis, a process accompanied by a radical change of the body plan and cell transdifferentiation. The continuity between larval cells and adult tissues is still obscure. In a previous study, we have produced polyclonal antibodies against the major protein of the flagellated cells covering the larva of the sponge <i>Halisarca dujardinii</i>, used them to trace the fate of these cells and shown that the larval flagellated cells transdifferentiate into the choanocytes. In the present work, we identified the sequence of this novel protein, which we named Ilborin. A search in the open databases showed that multiple orthologues of the newly identified protein were present in sponges, cnidarians, flatworms, ctenophores and echinoderms, but none of them has been described yet. Ilborin has two conservative domains: triosephosphate isomerase-barrel, which has enzymatic activity against macroergic compounds, and canonical EF-hand, which binds calcium. mRNA of Ilborin is expressed in the larval flagellated cells. We suggest that the new protein is involved in the calcium-mediated regulation of energy metabolism, whose activation precedes metamorphosis.
DOI: 10.6084/m9.figshare.19194638
title: Supplementary File 3.fasta from Novel protein from larval sponge cells, Ilborin, is related to energy turnover, calcium binding and is conserved among marine invertebrates

description: Sponges (phylum Porifera) are early-branching animals, whose outwardly simple body plan is underlain by a complex genetic repertoire. The transition from a mobile larva to an attached filter-feeding organism occurs by metamorphosis, a process accompanied by a radical change of the body plan and cell transdifferentiation. The continuity between larval cells and adult tissues is still obscure. In a previous study, we have produced polyclonal antibodies against the major protein of the flagellated cells covering the larva of the sponge <i>Halisarca dujardinii</i>, used them to trace the fate of these cells and shown that the larval flagellated cells transdifferentiate into the choanocytes. In the present work, we identified the sequence of this novel protein, which we named Ilborin. A search in the open databases showed that multiple orthologues of the newly identified protein were present in sponges, cnidarians, flatworms, ctenophores and echinoderms, but none of them has been described yet. Ilborin has two conservative domains: triosephosphate isomerase-barrel, which has enzymatic activity against macroergic compounds, and canonical EF-hand, which binds calcium. mRNA of Ilborin is expressed in the larval flagellated cells. We suggest that the new protein is involved in the calcium-mediated regulation of energy metabolism, whose activation precedes metamorphosis.
DOI: 10.6084/m9.figshare.19194644.v1
title: Supplementary File 7.fasta from Novel protein from larval sponge cells, Ilborin, is related to energy turnover, calcium binding and is conserved among marine invertebrates

description: Sponges (phylum Porifera) are early-branching animals, whose outwardly simple body plan is underlain by a complex genetic repertoire. The transition from a mobile larva to an attached filter-feeding organism occurs by metamorphosis, a process accompanied by a radical change of the body plan and cell transdifferentiation. The continuity between larval cells and adult tissues is still obscure. In a previous study, we have produced polyclonal antibodies against the major protein of the flagellated cells covering the larva of the sponge <i>Halisarca dujardinii</i>, used them to trace the fate of these cells and shown that the larval flagellated cells transdifferentiate into the choanocytes. In the present work, we identified the sequence of this novel protein, which we named Ilborin. A search in the open databases showed that multiple orthologues of the newly identified protein were present in sponges, cnidarians, flatworms, ctenophores and echinoderms, but none of them has been described yet. Ilborin has two conservative domains: triosephosphate isomerase-barrel, which has enzymatic activity against macroergic compounds, and canonical EF-hand, which binds calcium. mRNA of Ilborin is expressed in the larval flagellated cells. We suggest that the new protein is involved in the calcium-mediated regulation of energy metabolism, whose activation precedes metamorphosis.
DOI: 10.6084/m9.figshare.19194644
title: Supplementary File 7.fasta from Novel protein from larval sponge cells, Ilborin, is related to energy turnover, calcium binding and is conserved among marine invertebrates

description: Sponges (phylum Porifera) are early-branching animals, whose outwardly simple body plan is underlain by a complex genetic repertoire. The transition from a mobile larva to an attached filter-feeding organism occurs by metamorphosis, a process accompanied by a radical change of the body plan and cell transdifferentiation. The continuity between larval cells and adult tissues is still obscure. In a previous study, we have produced polyclonal antibodies against the major protein of the flagellated cells covering the larva of the sponge <i>Halisarca dujardinii</i>, used them to trace the fate of these cells and shown that the larval flagellated cells transdifferentiate into the choanocytes. In the present work, we identified the sequence of this novel protein, which we named Ilborin. A search in the open databases showed that multiple orthologues of the newly identified protein were present in sponges, cnidarians, flatworms, ctenophores and echinoderms, but none of them has been described yet. Ilborin has two conservative domains: triosephosphate isomerase-barrel, which has enzymatic activity against macroergic compounds, and canonical EF-hand, which binds calcium. mRNA of Ilborin is expressed in the larval flagellated cells. We suggest that the new protein is involved in the calcium-mediated regulation of energy metabolism, whose activation precedes metamorphosis.
DOI: 10.6084/m9.figshare.19194647
title: Supplementary File 5.fasta from Novel protein from larval sponge cells, Ilborin, is related to energy turnover, calcium binding and is conserved among marine invertebrates

description: Sponges (phylum Porifera) are early-branching animals, whose outwardly simple body plan is underlain by a complex genetic repertoire. The transition from a mobile larva to an attached filter-feeding organism occurs by metamorphosis, a process accompanied by a radical change of the body plan and cell transdifferentiation. The continuity between larval cells and adult tissues is still obscure. In a previous study, we have produced polyclonal antibodies against the major protein of the flagellated cells covering the larva of the sponge <i>Halisarca dujardinii</i>, used them to trace the fate of these cells and shown that the larval flagellated cells transdifferentiate into the choanocytes. In the present work, we identified the sequence of this novel protein, which we named Ilborin. A search in the open databases showed that multiple orthologues of the newly identified protein were present in sponges, cnidarians, flatworms, ctenophores and echinoderms, but none of them has been described yet. Ilborin has two conservative domains: triosephosphate isomerase-barrel, which has enzymatic activity against macroergic compounds, and canonical EF-hand, which binds calcium. mRNA of Ilborin is expressed in the larval flagellated cells. We suggest that the new protein is involved in the calcium-mediated regulation of energy metabolism, whose activation precedes metamorphosis.
DOI: 10.6084/m9.figshare.19194647.v1
title: Supplementary File 5.fasta from Novel protein from larval sponge cells, Ilborin, is related to energy turnover, calcium binding and is conserved among marine invertebrates

description: Sponges (phylum Porifera) are early-branching animals, whose outwardly simple body plan is underlain by a complex genetic repertoire. The transition from a mobile larva to an attached filter-feeding organism occurs by metamorphosis, a process accompanied by a radical change of the body plan and cell transdifferentiation. The continuity between larval cells and adult tissues is still obscure. In a previous study, we have produced polyclonal antibodies against the major protein of the flagellated cells covering the larva of the sponge <i>Halisarca dujardinii</i>, used them to trace the fate of these cells and shown that the larval flagellated cells transdifferentiate into the choanocytes. In the present work, we identified the sequence of this novel protein, which we named Ilborin. A search in the open databases showed that multiple orthologues of the newly identified protein were present in sponges, cnidarians, flatworms, ctenophores and echinoderms, but none of them has been described yet. Ilborin has two conservative domains: triosephosphate isomerase-barrel, which has enzymatic activity against macroergic compounds, and canonical EF-hand, which binds calcium. mRNA of Ilborin is expressed in the larval flagellated cells. We suggest that the new protein is involved in the calcium-mediated regulation of energy metabolism, whose activation precedes metamorphosis.
DOI: 10.6084/m9.figshare.19194653
title: Supplementary File 10.txt from Novel protein from larval sponge cells, Ilborin, is related to energy turnover, calcium binding and is conserved among marine invertebrates

description: Sponges (phylum Porifera) are early-branching animals, whose outwardly simple body plan is underlain by a complex genetic repertoire. The transition from a mobile larva to an attached filter-feeding organism occurs by metamorphosis, a process accompanied by a radical change of the body plan and cell transdifferentiation. The continuity between larval cells and adult tissues is still obscure. In a previous study, we have produced polyclonal antibodies against the major protein of the flagellated cells covering the larva of the sponge <i>Halisarca dujardinii</i>, used them to trace the fate of these cells and shown that the larval flagellated cells transdifferentiate into the choanocytes. In the present work, we identified the sequence of this novel protein, which we named Ilborin. A search in the open databases showed that multiple orthologues of the newly identified protein were present in sponges, cnidarians, flatworms, ctenophores and echinoderms, but none of them has been described yet. Ilborin has two conservative domains: triosephosphate isomerase-barrel, which has enzymatic activity against macroergic compounds, and canonical EF-hand, which binds calcium. mRNA of Ilborin is expressed in the larval flagellated cells. We suggest that the new protein is involved in the calcium-mediated regulation of energy metabolism, whose activation precedes metamorphosis.
DOI: 10.6084/m9.figshare.19194653.v1
title: Supplementary File 10.txt from Novel protein from larval sponge cells, Ilborin, is related to energy turnover, calcium binding and is conserved among marine invertebrates

description: Sponges (phylum Porifera) are early-branching animals, whose outwardly simple body plan is underlain by a complex genetic repertoire. The transition from a mobile larva to an attached filter-feeding organism occurs by metamorphosis, a process accompanied by a radical change of the body plan and cell transdifferentiation. The continuity between larval cells and adult tissues is still obscure. In a previous study, we have produced polyclonal antibodies against the major protein of the flagellated cells covering the larva of the sponge <i>Halisarca dujardinii</i>, used them to trace the fate of these cells and shown that the larval flagellated cells transdifferentiate into the choanocytes. In the present work, we identified the sequence of this novel protein, which we named Ilborin. A search in the open databases showed that multiple orthologues of the newly identified protein were present in sponges, cnidarians, flatworms, ctenophores and echinoderms, but none of them has been described yet. Ilborin has two conservative domains: triosephosphate isomerase-barrel, which has enzymatic activity against macroergic compounds, and canonical EF-hand, which binds calcium. mRNA of Ilborin is expressed in the larval flagellated cells. We suggest that the new protein is involved in the calcium-mediated regulation of energy metabolism, whose activation precedes metamorphosis.
DOI: 10.25451/flinders.19193519
title: Unparalleled mitochondrial heteroplasmy and Wolbachia co-infection in the non-model bee, Amphylaeus morosus

description: Datasets associated with Davies et al. 2022 "Unparalleled mitochondrial heteroplasmy and Wolbachia co-infection in the non-model bee, <i>Amphylaeus morosus</i>", Current Research in Insect Science.<br>We describe widespread and conserved mitochondrial heteroplasmy in Australian native bee, <i>Amphylaeus morosus</i> and the co-occurring co-infection of the bacterial endosymbiont, <i>Wolbachia</i> across the species' distribution.<br><br>Amphylaeus_iontorrent_mtgenome.zip = compressed folder of the partial mitogenome alignment and raw data for a single <i>Amphylaeus morosus</i> individual with DNA sequence data generated using Ion Torrent shotgun sequencing.<br><br>Amphylaeus_sangerseq_mt-coi-gene.zip = compressed folder of DNA chromatograms of the (heteroplasmic) mitochondrial COI gene of 70 <i>Amphylaeus morosus</i> individuals with DNA sequences generated using Sanger sequencing.<br><br>Wolbachia_BEAST_phylog_log.zip = compressed folder of DNA alignment and BEAST2 phylogenetic log and output files for the phylogenetic analysis of the <i>Wolbachia </i>COI-like and <i>wsp</i> genes from host, <i>Amphylaeus morosus</i>.<br>Wolbachia_cloning.zip = compressed folder of DNA chromatograms of the cloning products of two <i>Amphylaeus morosus</i> individuals for the two <i>Wolbachia </i>gene regions <i>wsp</i> and COI-like, generated using Sanger sequencing.<br><br>Wolbachia_sangerseq_coi-like-gene.zip = compressed folder of DNA chromatograms of the <i>Wolbachia </i>COI-like gene region (with heterogeneious base pairs indicating a bacterial co-infection) of 27 <i>Amphylaeus morosus</i> individuals, with DNA sequences generated using Sanger sequencing.<br><br><br>
DOI: 10.25451/flinders.19193519.v1
title: Unparalleled mitochondrial heteroplasmy and Wolbachia co-infection in the non-model bee, Amphylaeus morosus

description: Datasets associated with Davies et al. 2022 "Unparalleled mitochondrial heteroplasmy and Wolbachia co-infection in the non-model bee, <i>Amphylaeus morosus</i>", Current Research in Insect Science.<br>We describe widespread and conserved mitochondrial heteroplasmy in Australian native bee, <i>Amphylaeus morosus</i> and the co-occurring co-infection of the bacterial endosymbiont, <i>Wolbachia</i> across the species' distribution.<br><br>Amphylaeus_iontorrent_mtgenome.zip = compressed folder of the partial mitogenome alignment and raw data for a single <i>Amphylaeus morosus</i> individual with DNA sequence data generated using Ion Torrent shotgun sequencing.<br><br>Amphylaeus_sangerseq_mt-coi-gene.zip = compressed folder of DNA chromatograms of the (heteroplasmic) mitochondrial COI gene of 70 <i>Amphylaeus morosus</i> individuals with DNA sequences generated using Sanger sequencing.<br><br>Wolbachia_BEAST_phylog_log.zip = compressed folder of DNA alignment and BEAST2 phylogenetic log and output files for the phylogenetic analysis of the <i>Wolbachia </i>COI-like and <i>wsp</i> genes from host, <i>Amphylaeus morosus</i>.<br>Wolbachia_cloning.zip = compressed folder of DNA chromatograms of the cloning products of two <i>Amphylaeus morosus</i> individuals for the two <i>Wolbachia </i>gene regions <i>wsp</i> and COI-like, generated using Sanger sequencing.<br><br>Wolbachia_sangerseq_coi-like-gene.zip = compressed folder of DNA chromatograms of the <i>Wolbachia </i>COI-like gene region (with heterogeneious base pairs indicating a bacterial co-infection) of 27 <i>Amphylaeus morosus</i> individuals, with DNA sequences generated using Sanger sequencing.<br><br><br>
DOI: 10.6084/m9.figshare.19194848.v1
title: Raw data for adults from Pre-adolescent children exhibit lower aerosol particle volume emissions than adults for breathing, speaking, singing and shouting

description: Raw data, containing particle emission rates, relative humidities, shrinking factors, and particle volume rates for each adult and condition
DOI: 10.6084/m9.figshare.19194848
title: Raw data for adults from Pre-adolescent children exhibit lower aerosol particle volume emissions than adults for breathing, speaking, singing and shouting

description: Raw data, containing particle emission rates, relative humidities, shrinking factors, and particle volume rates for each adult and condition
DOI: 10.6084/m9.figshare.19194851.v1
title: Libraries from Pre-adolescent children exhibit lower aerosol particle volume emissions than adults for breathing, speaking, singing and shouting

description: R-script, containing libraries
DOI: 10.6084/m9.figshare.19194851
title: Libraries from Pre-adolescent children exhibit lower aerosol particle volume emissions than adults for breathing, speaking, singing and shouting

description: R-script, containing libraries
DOI: 10.6084/m9.figshare.19194854
title: Data analysis and statistics from Pre-adolescent children exhibit lower aerosol particle volume emissions than adults for breathing, speaking, singing and shouting

description: R-script, containing data analysis and statistics (main file)
DOI: 10.6084/m9.figshare.19194854.v1
title: Data analysis and statistics from Pre-adolescent children exhibit lower aerosol particle volume emissions than adults for breathing, speaking, singing and shouting

description: R-script, containing data analysis and statistics (main file)
DOI: 10.6084/m9.figshare.19194857
title: Raw data for children from Pre-adolescent children exhibit lower aerosol particle volume emissions than adults for breathing, speaking, singing and shouting

description: Raw data, containing particle emission rates, relative humidities, shrinking factors, and particle volume rates for each children and condition
DOI: 10.6084/m9.figshare.19194857.v1
title: Raw data for children from Pre-adolescent children exhibit lower aerosol particle volume emissions than adults for breathing, speaking, singing and shouting

description: Raw data, containing particle emission rates, relative humidities, shrinking factors, and particle volume rates for each children and condition
DOI: 10.25919/3cdk-r555
title: Parkes pulsar observations with undefined project IDs for 2021OCTS_13

description: Parkes pulsar observations with undefined project IDs for 2021OCTS.
DOI: 10.5281/zenodo.6038470
title: Dataset 89 subjects for BDNF study

description: This is a dataset used and/or analyzed during the study of BDNF in acute ischemic stroke patients
DOI: 10.5281/zenodo.6038469
title: Dataset 89 subjects for BDNF study

description: This is a dataset used and/or analyzed during the study of BDNF in acute ischemic stroke patients
DOI: 10.25919/7b1k-xp82
title: Parkes observations for project P1021 semester 2021OCTS_05

description: We propose to continue our observations of PSR J1653-45 and PSR J1812-15, a pair of long spin-period binary pulsars which both show degrees of orbitally-dependent variability. Binary pulsars are valuable objects of scientific study, allowing for multiple applications including tests of gravity, probes of the neutron star equation of state, and fossil records of stellar evolution. Long spin-period pulsars in binary systems are generally much rarer than faster-spinning `recycled’ pulsars, and represent an under-explored region of pulsar binary evolution. This is particularly true of PSR J1812-15, for which only one other pulsar (B1718-19) seems remotely comparable. Based upon previous Parkes proposals, our understanding of these pulsars and their place with binary evolution has significantly increased, such that we anticipate their publication in early 2022. We therefore propose a low-cadence campaign intended to finalise the timing of both pulsars. For PSR J1812-15, this data will be useful in addressing on-going problems with phase connection, which may be caused by an undiagnosed glitch or other un-modeled timing effect. For PSR J1653-45, this data will be useful in both capitalising on the breakthroughs of the 2021APRS campaign (detection of the pulsar during its eclipse phase) and in setting up a future eclipse campaign should it be deemed of sufficient scientific merit. These observations are the final step needed to ensure the publication of these pulsars in the immediate term.