cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23983038.v1
title: CD4T scRNAseq meta-analysis summary data

description: Summary data of CD4T scRNAseq meta-analysis.# ReferenceSingle-cell transcriptome landscape of circulating CD4<sup>+</sup> T cell populations in human autoimmune diseasesYoshiaki Yasumizu, Daiki Takeuchi, Reo Morimoto, Yusuke Takeshima, Tatsusada Okuno, Makoto Kinoshita, Takayoshi Morita, Yasuhiro Kato, Min Wang, Daisuke Motooka, Daisuke Okuzaki, Yamami Nakamura, Norihisa Mikami, Masaya Arai, Xuan Zhang, Atsushi Kumanogoh, Hideki Mochizuki, Naganari Ohkura, Shimon SakaguchibioRxiv 2023.05.09.540089; doi: https://doi.org/10.1101/2023.05.09.540089
DOI: 10.6084/m9.figshare.26207462.v1
title: Revisión bibliográfica sobre conceptualización de igualdad de género. Tabla de resultados.

description: Cuadro de documentos utilizados para la realización de una revisión bibliográfica sobre la conceptualización de género.
DOI: 10.6084/m9.figshare.5113954.v5
title: Pinus sylvestris chorology

description: Distribution map of Scots pine (<i>Pinus sylvestris</i>)<br><br>These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geo-databases, scientific and grey literature.<br>The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix "plg"), which define continuous areas of occupancy of the species, and with point features (name suffix "pnt"), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix "syn"). <br>Polygon borders delimiting species ranges are generalized across the mainland and sea boundaries. This offers the possibility to mask sea areas or to clip and extract the terrestrial range parts using GIS data layers of the users' choice. An additional version of polygon ranges are clipped with a coastline (name suffix "clip"), which have been derived from Natural Earth dataset "Admin 0 - Countries" 1:50M version 4.1.0 (https://www.naturalearthdata.com). <br><br>Please cite as:<br>Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007 <br><br>Additional information and used references are on 'supplementary materials' document:<br>https://doi.org/10.6084/m9.figshare.5091901<br><br>Chorological maps are part of the "European Atlas of Forest Tree Species" project:<br>https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.17632/fdm2ndrcrw
title: Prevalence of urinary tract infection in girls

description: The study aimed to check the prevalence of urinary tract infection among college going girls. In this study a questionnaire was created regarding UTI and directed through Google forms and data was collected . Total 138 responses were received through Google forms then the data was analyzed using statistical software. After analysis it was found that about 24% of girls had suffered from urinary tract infections and 76% girls only experienced symptoms but were not diagnosed with urinary tract infection.
DOI: 10.17632/fss67tz8w8
title: Segmented Vegetation-Density Drone Dataset for Peatland Vegetation Classification

description: Vegetation Density of Peatland Drone dataset consists of 3 density classes namely bare, softly grazed and heavily grazed. The images were taken in The Liang Anggang Protection Forest Block I in Banjarbaru, South Kalimantan, Indonesia. an area of 479 hectares of block 1 area which is filled with land such as agriculture, plantations, roads and settlements and an area of 494 hectares full of weeds. In addition, the location is also categorized as peat land. The location, especially in block 1, fulfils the characteristics and suitability of the need for data collection for land cover classification in terms of the type of vegetation density that can be seen with the human eye during observations and surveys.

Bare/un-grazed typically consists of dry shrubs, soil, water, and settlements, while heavily grazed typically consists of vegetation that has a density between 15 and 30 meters. Meanwhile, softly grazed typically consists of shrubs that are 5 to 6 meters apart and fresh shrubs up to a maximum of 3 meters.

Image capture was carried out from November - December 2021 using DJI Mavic Pro drone.The resolution of the acquired image is 4000 x 3000 pixel with total of 300 images, each corresponding class have 100 images and its segmentation label.
DOI: 10.17632/g53jsbb97x
title: Effectiveness of Neuro Linguistics Programming and Structured Exercises on Motor Skills, Physical Fitness and Attention in Children with ADHD - A Randomized Control Trial

description: Attention Deficit Hyperactivity Disorder (ADHD), is a prevalent, neuro behavioral disorder defined by developmentally inappropriate symptoms of inattention, impulsiveness and overactivity. This, study was conducted in two phases, the aim of phase-I was to evaluate motor skills, physical fitness and attention in ADHD and typically developing children. While, the aims of phase-II was to evaluate the effectiveness of a Structured Exercise Program (SEP), and Neuro Linguistics programming (NLP) on motor skills, physical fitness and attention in ADHD children.
The Phase-I was a two-group comparative, cross sectional study, wherein seventy one ADHD and seventy one typically developing children were recruited, and assessed on motor skills, physical fitness and attention. An Independent t-test revealed that ADHD children had significant deficits in motor skills, physical fitness (except BMI) and attention compared to typically developing children (p &lt; 0.05).
The Phase-II study was a randomized control trial, between factor had three groups, Group-A, received SEP, Group-B, received SEP+NLP, and Group-C were the controls, continued with their routine activities. The repeated factor was time, had three levels: pre-intervention, post 1 following 6 weeks of intervention, and post 2, follow up after 2 weeks. SEP group received eighteen sessions (three times/ week for 6 weeks) inaddition to this SEP+NLP group received six sessions of NLP. ANOVA revealed significant improvements in SEP and SEP+NLP group compared to the control group (p &lt; 0.05). Multiple comparisons using Bonferroni p&lt;0.05, revealed significant improvement following SEP + NLP, compared to only SEP following six weeks of intervention and during two weeks of follow up period. 
In conclusion, it was observed that ADHD children exhibited greater motor skills, physical fitness and attention deficits, compared to their typically developing peers. It was found that a school-based structured exercise program independently and/or in combination with a Neurolinguistics program improved motor skills,physical fitness and attention in ADHD children.
DOI: 10.17632/px455bwjg2
title: Data for Drill-Stem Test (DST) in Sweetwater County, Wyoming, USA.

description: This is a dataset for drill-stem test (DST) from Sweetwater county, Wyoming, USA. The data was digitized from legacy reports, organized, vetted, and analyzed for easy-of-use. This data was collected under Wyoming Class VI Site Characterization Database project funded by the US Department of Energy. Project award #: DE-FE0032372 (FOA 2799).

Version 2:
- More thorough QC to ensure data reliability
- Collected more samples
- Fixed some minor issues with the code to analyze DST results.
DOI: 10.6084/m9.figshare.28924640.v1
title: Filtering Process for Records in AI Bibliometric Analysis

description: This dataset includes the filtering steps and final record counts used in the bibliometric analysis of AI technologies applied to biomedical research, disaggregated by disease and technology.
DOI: 10.6084/m9.figshare.5346571.v3
title: COMP 111 Syllabus: History of Computing at Loyola University Chicago

description: The social and organizational history of humanity is intricately entangled with the history of technology in general and the technology of information in particular. Advances in this area have often been closely involved in social and political transformations. While the contemporary period is often referred to by such names as the Computing and Information Age, this is the culmination of a series of historical transformations that have been centuries in the making. This course will provide a venue for students to learn about history through the evolution of number systems and arithmetic, calculating and computing machines, and advanced communication technology via the Internet. Students who take this course will attain a degree of technological literacy while studying core historical concepts. Students who complete this course will learn the key vocabulary of the computing discipline, which is playing a significant role in modern human thought and new media communications. The History of Computing will be organized around the historical perspective. The relationships between social organization, intellectual climate, and technology will be examined and stressed.
DOI: 10.6084/m9.figshare.22770668.v2
title: Calculation input files.7z

description: Input files for FHI-aims describing the compounds methylammonium lead iodide, lead iodide, hydrogen iodide, and methylamine. Geometry files specify atomic positions, and control files specify parameters for the calculation.
DOI: 10.17632/59vzvf2gjb
title: Questionnaire about the development of sportswear companies

description: The questionnaire is a survey on the management model of Chinese sportswear brands before and after entering the international market
DOI: 10.6084/m9.figshare.28789718.v3
title: Source data of Neoantigens combined with in situ cancer vaccination induce personalized immunity and reshape the tumor microenvironment

description: Neoantigen (nAg) vaccines can induce anti-tumor specific immunity, and tumor killing promotes further antigen diffusion, which is expected to improve prognosis. However, the mutation of cancer cells under the selective pressure of vaccines and the immunosuppressive tumor microenvironment make the therapeutic effect unsatisfactory. Here, we develop a nanovaccine (nAg-MRDE/Mn) that can deliver nAg and induce in situ cancer vaccination to synergistically promote a personalized immune response, enhance antigen diffusion, and improve the microenvironment by modulating immunosuppressive cells and activating the innate immune response. Experiments show that neoantigens are presented by dendritic cells and expressed by T cells, which cooperate with in situ vaccination to stimulate specific immunity. Cells involved in immunosuppression, such as M2 macrophages and regulatory T cells, are down-regulated, while M1 macrophages and natural killer cells are increased. In addition, the hydrogel loaded with chemokines and nAg-MRDE/Mn inhibits postoperative tumor recurrence, and the combination of nAg-MRDE/Mn and αPD-1 improves the therapeutic effect of αPD-1. This study validates the clinical potential of this strategy and provides ideas for improving neoantigen vaccines.
DOI: 10.6084/m9.figshare.7998251.v2
title: Table S1 from Rise of the titans: baleen whales became giants earlier than thought.

description: Length estimates for Balaenoptera cf. musculus
DOI: 10.17632/y8dgfgzs2k
title: Quality assessment

description: Supporting data for quality assessement of open buiding datasets
DOI: 10.6084/m9.figshare.27937287.v2
title: A bootstrap test for exploring the impact of the covariates in the linear model with non-normal errors

description: Linear regression models have been extensively studied and used under the assumption that the model error term is normally distributed. However, in many practiced situations, this assumption may not be met. Thus, conclusions of statistical inference and hypothesis testing based on Ordinary Least Square (short for OLS) may be incorrect and unbelievable in condition of error term following non-normal distributions. Based on the above considerations, it is necessary for investigating linear regression models with non-normal errors. In this paper, we focus on the estimation and inference of the linear model with non-normal errors. Specifically, a non-parametric procedure is first developed for calibrating the model. Then, a bootstrap test is presented to detect the significance of the impact of certain covariates on the response based on the idea of variance analysis. Simulation results show that the estimation and proposed test method performs well.
DOI: 10.6084/m9.figshare.19221678.v9
title: Discrete emotions for Croatian: CROWD-5e dataset.xlsx

description: Normative database for 3,022 Croatian words rated on five discrete emotions: happiness, fear, anger, sadness & disgust. <br>Manuscript: CROWD-5e: A 3,022 Croatian words psycholinguistic database covering affective norms for five discrete emotions<br>
DOI: 10.6084/m9.figshare.28560203.v2
title: Replication Package for Data Quality in AI-based Systems

description: This package contains the materials for our survey study involving 91 participants on <b>"How to Ensure High-Quality Data for AI? Lessons from Practitioners."</b> It includes:The raw survey data and demographic chartsPython script for generating figureThe survey questionnaireThis package enables replication and further analysis of our study findings.
DOI: 10.6084/m9.figshare.29106095.v2
title: PEFR

description: pefr for Occluded person reid.The model weights are stored in the uploaded folders, each named after a dataset.
DOI: 10.7294/16624495.v1
title: COCO-Bridge 2021+ Dataset

description: <p>This is a dataset of structural bridge details, submitted as
an extension to COCO-Bridge (Bianchi, 2021) (https://doi.org/10.7294/m8pg-4a02). There are four structural bridge
details labeled in this dataset: [bearings, cover plate terminations, gusset
plate connections, and out of plane stiffeners]. The dataset contains 1470
annotated structural bridge images with the respective csv, txt, and xml files.
The data was obtained from real structural bridge inspection reports from the
Virginia Department of Transportation (VDOT). The data was intended to be used
for bounding box detection, as the annotations are all for this form of
detection. The model was split at roughly 10% Test (136 images), 90% Training
(1321 images). Annotation guidelines for understanding the rules we used for
labeling the images are provided in the file. We trained with an SSD model and a YOLOv4 model (DOI: 10.7294/16625095). SSD expects
images to be 300x300, YOLOv4 expects images to be 320x320. For a confidence
threshold of 25% and an IoU threshold of 50%, the SSD (with augmentation) and
YOLOv4 model achieved mean average precision (mAP) scores of 60% and 88%,
respectfully. More details of the training, the results, the dataset, and the
code may be referenced in the journal article. The GitHub repository
information may be found in the journal article.</p><p><br>If you are using the dataset in your work, please include <b>both </b>the journal article and the dataset citation. <br></p><br>
DOI: 10.17632/pb4fj9fjjv
title: Data for: Smallholder farmers’ willingness to pay for scale-appropriate farm mechanization: Evidence from the mid-hills of Nepal

description: Meta data and data used in this article.
DOI: 10.6084/m9.figshare.13265549.v1
title: Maternal Depression experiences FDG transcription

description: The aim of FGDs was to identify the causes of depression among pregnant women and the experiences around them. In this qualitative inquiry, 20 pregnant women with depressive symptoms (EPDS score cut-off score &gt;13) were invited to participate. Two FGDs with a group of 10 participants were conducted from each site of Kangemi and Kawangware, respectively. Face to face discussion was conducted away from the health center by two female field researchers (BM and a research assistant) in a hired hall convenient for the women to discuss. The interviewer were both trained on mental health quantitative and qualitative research methods. The relationship between researcher and pregnant women was established prior to study. The FGD lasted for 60–90 minutes, and it was conducted in the Kiswahili language and was audio-recorded. <br>
DOI: 10.6084/m9.figshare.15052083.v1
title: SST and SSH data

description: where can find the SST and SSH data
DOI: 10.6084/m9.figshare.23292389.v2
title: R codes and source files for wheat DEGs.

description: 1) The file 'source_code_corr.R' was used to generate Figure 3 and 4 in the manuscript.2) The file 'heatmap_script.R' can be used to generate any heatmap using wheat TraesIDs from the gene expression count file 'wheat_RNAseq_DEGs.zip' or available at https://datadryad.org/stash/dataset/doi:10.5061/dryad.zs7h44jcs.3) The Excel file 'Resource_RNAseq.xlsx' contains data used to generate Figures 1-4 in the manuscript.<br>
DOI: 10.6084/m9.figshare.23542566.v1
title: Genome annotations of <em>Knoxia roxburghii</em>

description: Genome annotations of <em>Knoxia roxburghii</em>
DOI: 10.6084/m9.figshare.25746867.v2
title: Tests for Large-Dimensional Shape Matrices via Tyler’s M Estimators

description: Tyler’s M estimator, as a robust alternative to the sample covariance matrix, has been widely applied in robust statistics. However, classical theory on Tyler’s M estimator is mainly developed in the low-dimensional regime for elliptical populations. It remains largely unknown when the parameter of dimension <i>p</i> grows proportionally to the sample size <i>n</i> for general populations. By using the eigenvalues of Tyler’s M estimator, this article develops tests for the identity and equality of shape matrices in a large-dimensional framework where the dimension-to-sample size ratio <i>p</i>/<i>n</i> has a limit in (0, 1). The proposed tests can be applied to a broad class of multivariate distributions including the family of elliptical distributions (see model (2.1) for details). To analyze both the null and alternative distributions of the proposed tests, we provide a unified theory on the spectrum of a large-dimensional Tyler’s M estimator when the underlying population is general. Simulation results demonstrate good performance and robustness of our tests. An empirical analysis of the Fama-French 49 industrial portfolios is carried out to demonstrate the shape of the portfolios varying. Supplementary materials for this article are available online, including a standardized description of the materials available for reproducing the work.
DOI: 10.6084/m9.figshare.29039192.v1
title: CT and MRI scan of a 2yo male dog Yorkshire Terrier

description: This dataset contains de-identified DICOM files from CT (250 DICOM slices) and MRI (356 slices) studies of a 2-year-old male Yorkshire Terrier (body weight: 2.2 kg; estimated skull coronal width: ~50 mm) who sustained traumatic cranial injury. The imaging was performed on post-injury day 11 following initial stabilization. De-identification was performed using the RSNA Clinical Trial Processor (CTP) anonymization tool, in accordance with standard protocols.Cross-sectional imaging demonstrated a large scalp hematoma over the frontal and parietal bones, multiple depressed cranial fractures, and a left cerebral contusion characterized by heterogeneous signal intensity, structural disruption, and intraparenchymal fluid accumulation.
DOI: 10.6084/m9.figshare.29206628
title: Reimagining Disaster Resilience Education: A critical review of what can be transformative

description: The presentation summarises my PhD and in particular the findings of a critical review of international disaster resilience education programmes delivered in school settings.
DOI: 10.6084/m9.figshare.28704275.v1
title: Supplementary Material for: The impact of laparoscopic cystectomy for ovarian endometrioma on anti-Mullerian hormone levels: a systematic review and meta-analysis

description: Introduction: Endometriosis is a condition that leads to a chronic inflammatory state, which has been associated with pelvic pain and infertility. Ovarian endometriomas are commonly treated via laparoscopic cystectomy, however, there is some debate on the degree of ovarian damage after cystectomy. The aim of this systematic review and meta-analysis was to conduct a thorough assessment of post-operative anti-Müllerian hormone levels, a marker of ovarian reserve, after laparoscopic cystectomy for endometriomas. 
Methods: We conducted a search of PubMed, EMBASE, Web of Science, Google Scholar, and Science Direct from inception to March 31, 2024. We included randomized and non-randomized studies that assessed pre- and post-operative anti-Müllerian hormone levels after ovarian cystectomy for endometriomas. Outcomes of interest included the differences in anti-Müllerian hormone levels assessed within one month prior to surgery and up to 18 months post-operatively. These outcomes were categorized as short-term (up to six weeks), medium-term (seven weeks to six months), and long-term (six months to 18 months). Randomized and observational studies were pooled together for analysis, as only the intervention arm from the randomized trials was included in the meta-analysis. Continuous variables were extracted as means and standard deviations to produce a pooled weighted mean difference with 95% confidence intervals were calculated using a random-effects model.
Results: Of the 2,396 articles identified, 30 studies were included. Primary outcomes showed a statistically significant (P &lt; 0.001) decrease in anti-Müllerian hormone in the postoperative short-term period [-1.39 ng/mL, 95% CI, -2.01- (-0.76)], medium term period [-1.13 ng/mL (95% CI, -1.4- (-0.87)], and long term [-2.12 ng/mL (95% CI, -2.61- (-1.63)]. There was no significant difference when comparing anti-Müllerian hormone levels in the short term versus long-term period across all groups. There was no significant difference when comparing long term unilateral and bilateral cystectomies on anti-Müllerian hormone levels post operatively. 
Conclusions: This systematic review and meta-analysis highlights that there is a decline in serum AMH levels following laparoscopic cystectomy for endometriomas, suggesting a potential adverse impact on ovarian reserve. This outcome emphasizes the need to incorporate discussions about the implications of surgery on fertility into preoperative counseling.
DOI: 10.6084/m9.figshare.29206628.v2
title: Reimagining Disaster Resilience Education: A critical review of what can be transformative

description: The presentation summarises my PhD and in particular the findings of a critical review of international disaster resilience education programmes delivered in school settings.
DOI: 10.6084/m9.figshare.3983889.v2
title: A spiking neuron model of adaptive arm control - Supplementary material - data package 5

description: Analysis data required for generating correlations-M1 using the scripts provided at https://github.com/studywolf/REACH-paper/tree/master/analysis