cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18266000
title: Dataset for "Interpolation-Driven Machine Learning Approaches for Plume Shine Dose Estimation: A Comparison of XGBoost, Random Forest, and TabNet"

description: This Zenodo record contains the datasets, trained machine learning models, and supporting preprocessing artifacts used in the study on surrogate modeling of plume shine dose for radiological consequence assessment.

The repository includes preprocessed discrete datasets, interpolated continuous datasets, and trained models developed to predict plume shine dose as a function of downwind distance, release height, radionuclide identity, and atmospheric stability category. Interpolation was performed along the downwind distance dimension using shape-preserving methods to enhance spatial resolution while maintaining physical monotonicity of dose attenuation.

Contents

Trained machine learning models





xgboost_model_final_ep100_dep30.json: Trained XGBoost regression model




random_forest_final_ep100_dep15.pkl: Trained Random Forest regression model




tabnet_final.pkl: Trained TabNet deep learning model



Preprocessing and encoding artifacts





scaler.pkl: Feature scaling object used during model training




label_encoders.pkl: Label encoders for categorical variables (radionuclide and stability category)



Datasets





filtered_distance_2000_height_200_train_99.csv: Original discrete training dataset




filtered_distance_2000_height_200_test_1.csv: Independent test dataset (real, non-interpolated)




finer_interpolated_data_filtered_distance_2000_height_200_train_99.csv: Distance-wise interpolated training dataset




finer_interpolated_data_filtered_distance_2000_height_200_train_9975.csv: Interpolated dataset with additional augmentation




finer_interpolated_data_filtered_distance_2000_height_200_test_0025.csv: Held-out validation dataset



Notes





Interpolated datasets were generated using physically consistent one-dimensional interpolation along the downwind distance axis, performed separately for each radionuclide–release height–stability category combination.




The independent test dataset contains only original (non-interpolated) samples and was not used during model training.




The trained models and preprocessing objects are provided to ensure full reproducibility of the reported results.
DOI: 10.15468/dl.ss52fr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
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 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001921-260120142942310/datasets/export for details.
DOI: 10.5281/zenodo.15599453
title: Flavonifractor plautii: A Rare Pathogen in Sepsis and Critical Care – A Systematic Review of Literature. Meta-data from Covidence.

description: ABSTRACT

Background

Sepsis, a leading cause of morbidity and mortality, is commonly caused by bacterial infections. Flavonifractor plautii (F. plautii) is a rare anaerobic, gram-positive rod bacterium that forms part of the human intestinal microbiota. ObjectiveThis narrative review examines clinical manifestations, diagnostic approaches, and treatment strategies associated with F. plautii infections, focusing on its role as a potential pathogen in sepsis. The goal is to inform clinical decision-making for physicians treating patients with infections, especially in an emergency and critical care settings. MethodsThe investigators conducted a systematic search of PubMed, Medline and Embase databases to identify case reports and cohort studies involving F. plautii. A total of eleven case reports were identified and investigated. The findings were reviewed to assess patient characteristics, diagnostic methods, antibiotic treatment, and clinical outcomes.ResultsA wide range of comorbidities were noted, with immunocompromised patients dominating. The average age was 56 years. Most infections were from intestinal origin, commonly presenting as sepsis. Intensive care unit management was required in seven of the eleven case reports. In all the cases, the agent was cultured in blood, and in some reports, additionally cerebrospinal-, pleural- and synovial fluid. Antibiotic therapy varied, with meropenem and metronidazole most commonly used, despite antibiotic resistance was rare. All patients were discharged from the hospital alive. ConclusionsF. Plautii, although rarely isolated, should be considered potential pathogen in immunocompromised patients with abdominal infections and sepsis conditions. This review illustrates its ability to cause severe septic shock. No specific treatment recommendations beyond current sepsis guidelines were identified.  

Keywords

Sepsis, intensive care unit, infection, bacteria, anaerobe gram-positive
DOI: 10.5281/zenodo.16887861
title: Flavonifractor plautii: A Rare Pathogen in Sepsis and Critical Care – A Systematic Review of Literature. Meta-data from Covidence.

description: ABSTRACT

Background

Sepsis, a leading cause of morbidity and mortality, is commonly caused by bacterial infections. Flavonifractor plautii (F. plautii) is a rare anaerobic, gram-positive rod bacterium that forms part of the human intestinal microbiota. ObjectiveThis narrative review examines clinical manifestations, diagnostic approaches, and treatment strategies associated with F. plautii infections, focusing on its role as a potential pathogen in sepsis. The goal is to inform clinical decision-making for physicians treating patients with infections, especially in an emergency and critical care settings. MethodsThe investigators conducted a systematic search of PubMed, Medline and Embase databases to identify case reports and cohort studies involving F. plautii. A total of eleven case reports were identified and investigated. The findings were reviewed to assess patient characteristics, diagnostic methods, antibiotic treatment, and clinical outcomes.ResultsA wide range of comorbidities were noted, with immunocompromised patients dominating. The average age was 56 years. Most infections were from intestinal origin, commonly presenting as sepsis. Intensive care unit management was required in seven of the eleven case reports. In all the cases, the agent was cultured in blood, and in some reports, additionally cerebrospinal-, pleural- and synovial fluid. Antibiotic therapy varied, with meropenem and metronidazole most commonly used, despite antibiotic resistance was rare. All patients were discharged from the hospital alive. ConclusionsF. Plautii, although rarely isolated, should be considered potential pathogen in immunocompromised patients with abdominal infections and sepsis conditions. This review illustrates its ability to cause severe septic shock. No specific treatment recommendations beyond current sepsis guidelines were identified.  

Keywords

Sepsis, intensive care unit, infection, bacteria, anaerobe gram-positive
DOI: 10.15468/dl.cx2zur
title: Occurrence Download

description: A dataset containing 639 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-5000.0",
 "TaxonKey is Buddleja asiatica"
 ]
}

 The dataset includes 639 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001923-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vcjzbv
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((118.939 5.533146, 118.868411 5.527575, 118.799564 5.511001, 118.734157 5.483832, 118.673804 5.446738, 118.619993 5.400636, 118.574048 5.346661, 118.537101 5.286144, 118.510059 5.220578, 118.493585 5.151577, 118.488082 5.080842, 118.493682 5.010115, 118.510243 4.941137, 118.537355 4.875605, 118.574347 4.815131, 118.620307 4.761204, 118.674103 4.715149, 118.734411 4.678098, 118.799748 4.650963, 118.868508 4.634411, 118.939 4.628848, 119.009492 4.634411, 119.078252 4.650963, 119.143589 4.678098, 119.203897 4.715149, 119.257693 4.761204, 119.303653 4.815131, 119.340645 4.875605, 119.367757 4.941137, 119.384318 5.010115, 119.389918 5.080842, 119.384415 5.151577, 119.367941 5.220578, 119.340899 5.286144, 119.303952 5.346661, 119.258007 5.400636, 119.204196 5.446738, 119.143843 5.483832, 119.078436 5.511001, 119.009589 5.527575, 118.939 5.533146))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 37 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001924-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bqxdj9
title: Occurrence Download

description: A dataset containing 525 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Molanna moesta",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 525 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001925-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18323561
title: DArch: LLM-Assisted Logical Architecture Modeling Tool for Safety-Critical Software (Experience Results)
DOI: 10.15468/dl.jvwdyq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((117.991 1.234183, 117.920721 1.228615, 117.852173 1.212049, 117.787045 1.184893, 117.726941 1.147814, 117.673341 1.101728, 117.627565 1.047769, 117.590739 0.987266, 117.563771 0.921709, 117.547324 0.8527130000000001, 117.541801 0.781976, 117.547338 0.71124, 117.563799 0.642247, 117.590778 0.576695, 117.62761 0.516199, 117.673389 0.462247, 117.726987 0.416168, 117.787084 0.379097, 117.852201 0.351945, 117.920736 0.335382, 117.991 0.329816, 118.061264 0.335382, 118.129799 0.351945, 118.194916 0.379097, 118.255013 0.416168, 118.308611 0.462247, 118.35439 0.516199, 118.391222 0.576695, 118.418201 0.642247, 118.434662 0.71124, 118.440199 0.781976, 118.434676 0.8527130000000001, 118.418229 0.921709, 118.391261 0.987266, 118.354435 1.047769, 118.308659 1.101728, 118.255059 1.147814, 118.194955 1.184893, 118.129827 1.212049, 118.061279 1.228615, 117.991 1.234183))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001926-260120142942310/datasets/export for details.
DOI: 10.13140/rg.2.2.17589.74726
title: 2024-08-20_Neubauer_Poster_Untersuchung_des_WMS-Standard_auf_aktuelle_Rasterbildformate_und_Alternativen_V1.pdf
DOI: 10.5281/zenodo.18322429
title: peer review
DOI: 10.15468/dl.9s58pf
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Hong Kong",
 "TaxonKey is Apodynerus formosensis"
 ]
}

 The dataset includes 83 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001928-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e9knq6
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
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 The dataset includes 51 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001929-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e244520
title: Rhema University, Nigeria, Aba, Abia State, 2026/2027 ADMISSION FORM is out call 09031383306 DR MR JAMES (+249031383306) for TRANSCRIPT Collection School Admin Line 09031383306 To apply Also 2026/2027 Nursing form

description: Rhema University, Nigeria, Aba, Abia State, 2026/2027 ADMISSION FORM is out call 09031383306 DR MR JAMES (+249031383306) for TRANSCRIPT Collection School Admin Line 09031383306 To apply Also 2026/2027 Nursing form
DOI: 10.15468/dl.eafq5p
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((101.05 1.235183, 100.979721 1.229615, 100.911173 1.213049, 100.846045 1.185892, 100.785941 1.148814, 100.732341 1.102728, 100.686565 1.048769, 100.649739 0.988266, 100.622771 0.922709, 100.606323 0.8537130000000001, 100.600801 0.782976, 100.606338 0.71224, 100.622799 0.643247, 100.649778 0.577695, 100.68661 0.517199, 100.732389 0.463247, 100.785987 0.417168, 100.846084 0.380097, 100.911201 0.352945, 100.979736 0.336382, 101.05 0.330816, 101.120264 0.336382, 101.188799 0.352945, 101.253916 0.380097, 101.314013 0.417168, 101.367611 0.463247, 101.41339 0.517199, 101.450222 0.577695, 101.477201 0.643247, 101.493662 0.71224, 101.499199 0.782976, 101.493677 0.8537130000000001, 101.477229 0.922709, 101.450261 0.988266, 101.413435 1.048769, 101.367659 1.102728, 101.314059 1.148814, 101.253955 1.185892, 101.188827 1.213049, 101.120279 1.229615, 101.05 1.235183))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001930-260120142942310/datasets/export for details.
DOI: 10.13140/rg.2.2.31011.52003
title: 2024-08-20_Neubauer_Poster_Untersuchung_des_WMS-Standard_auf_aktuelle_Rasterbildformate_und_Alternativen_V2.pdf
DOI: 10.15468/dl.eu9cht
title: Occurrence Download

description: A dataset containing 698 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psilotreta kisoensis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 698 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001931-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hu7jpq
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((102.176 5.552146, 102.105409 5.546575, 102.036559 5.530001, 101.971151 5.502832, 101.910796 5.465738, 101.856983 5.419635, 101.811037 5.36566, 101.774088 5.305143, 101.747046 5.239577, 101.730572 5.170577, 101.725069 5.099842, 101.730669 5.029115, 101.747231 4.960136, 101.774343 4.894604, 101.811337 4.834131, 101.857298 4.780204, 101.911096 4.734149, 101.971406 4.697098, 102.036745 4.669963, 102.105506 4.653411, 102.176 4.647848, 102.246494 4.653411, 102.315255 4.669963, 102.380594 4.697098, 102.440904 4.734149, 102.494702 4.780204, 102.540663 4.834131, 102.577657 4.894604, 102.604769 4.960136, 102.621331 5.029115, 102.626931 5.099842, 102.621428 5.170577, 102.604954 5.239577, 102.577912 5.305143, 102.540963 5.36566, 102.495017 5.419635, 102.441204 5.465738, 102.380849 5.502832, 102.315441 5.530001, 102.246591 5.546575, 102.176 5.552146))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001932-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xq5xu7
title: Occurrence Download

description: A dataset containing 158350 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Quercus ilex)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is Europe"
 ]
}

 The dataset includes 158350 records from 878 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001906-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.abt8be
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((100.612 1.236183, 100.541721 1.230615, 100.473173 1.214049, 100.408045 1.186892, 100.347941 1.149814, 100.294341 1.103728, 100.248565 1.049769, 100.211739 0.989266, 100.184771 0.923709, 100.168323 0.8547129999999999, 100.162801 0.783976, 100.168338 0.71324, 100.184799 0.644247, 100.211778 0.578695, 100.24861 0.518199, 100.294389 0.464247, 100.347987 0.418168, 100.408084 0.381097, 100.473201 0.353945, 100.541736 0.337382, 100.612 0.331816, 100.682264 0.337382, 100.750799 0.353945, 100.815916 0.381097, 100.876013 0.418168, 100.929611 0.464247, 100.97539 0.518199, 101.012222 0.578695, 101.039201 0.644247, 101.055662 0.71324, 101.061199 0.783976, 101.055677 0.8547129999999999, 101.039229 0.923709, 101.012261 0.989266, 100.975435 1.049769, 100.929659 1.103728, 100.876059 1.149814, 100.815955 1.186892, 100.750827 1.214049, 100.682279 1.230615, 100.612 1.236183))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001933-260120142942310/datasets/export for details.
DOI: 10.15468/dl.2jz9bu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
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 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001934-260120142942310/datasets/export for details.