cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0191412.10fu
title: SH0191412.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0191413.10fu
title: SH0191413.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.f889gj
title: Occurrence Download

description: A dataset containing 388 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Biscutella neustriaca Bonnet"
 ]
}

 The dataset includes 388 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054141-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hxvqwq
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Disperis lindleyana Rchb.f."
 ]
}

 The dataset includes 132 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037421-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bk8976
title: Occurrence Download

description: A dataset containing 547861 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caltha palustris L."
 ]
}

 The dataset includes 547861 records from 1458 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075628-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a4olar
title: Occurrence Download

description: A dataset containing 193090 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Medicago lupulina L.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 193090 records from 569 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009798-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26578730
title: Additional file 5 of Targeting CLDN6 in germ cell tumors by an antibody-drug-conjugate and studying therapy resistance of yolk-sac tumors to identify and screen specific therapeutic options

description: Additional file 5: Table S1. List of used A) cell lines, B) inhibitors, C), oligonucleotides, and D) antibodies.
DOI: 10.6084/m9.figshare.26578730.v1
title: Additional file 5 of Targeting CLDN6 in germ cell tumors by an antibody-drug-conjugate and studying therapy resistance of yolk-sac tumors to identify and screen specific therapeutic options

description: Additional file 5: Table S1. List of used A) cell lines, B) inhibitors, C), oligonucleotides, and D) antibodies.
DOI: 10.6084/m9.figshare.26578733.v1
title: Additional file 6 of Targeting CLDN6 in germ cell tumors by an antibody-drug-conjugate and studying therapy resistance of yolk-sac tumors to identify and screen specific therapeutic options

description: Additional file 6: Data S1. Raw and processed mass spectrometry data of YST(-R) tissues and TSO assay data.
DOI: 10.6084/m9.figshare.26578733
title: Additional file 6 of Targeting CLDN6 in germ cell tumors by an antibody-drug-conjugate and studying therapy resistance of yolk-sac tumors to identify and screen specific therapeutic options

description: Additional file 6: Data S1. Raw and processed mass spectrometry data of YST(-R) tissues and TSO assay data.
DOI: 10.15468/dl.5b37vw
title: Occurrence Download

description: A dataset containing 249 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.15677 -33.072168, 147.15677 -33.074414, 147.147787 -33.074414, 147.147787 -33.081151, 147.150033 -33.081151, 147.150033 -33.078905, 147.154525 -33.078905, 147.154525 -33.081151, 147.163508 -33.081151, 147.163508 -33.078905, 147.170245 -33.078905, 147.170245 -33.072168, 147.165754 -33.072168, 147.165754 -33.074414, 147.161262 -33.074414, 147.161262 -33.072168, 147.15677 -33.072168))"
 ]
}

 The dataset includes 249 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068205-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24234185.v1
title: Additional file 1 of Subconjunctival injection of human umbilical cord mesenchymal stem cells alleviates experimental allergic conjunctivitis via regulating T cell response

description: Additional file 1. Table S1: Antibodies for identifying the differentiation of Th0 into Th2 cells. Table S2: Primers for analysis of expression levels of the cytokines and the differentiation-related genes of Th0 cells.
DOI: 10.15468/dl.ksh34p
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.776611 -33.074414, 147.776611 -33.081151, 147.778857 -33.081151, 147.778857 -33.074414, 147.776611 -33.074414))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068207-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26621920.v1
title: Additional file 10 of The association of herpes zoster and influenza vaccinations with the risk of developing dementia: a population-based cohort study within the UK Clinical Practice Research Datalink

description: Additional file 10. Product codes for anti-viral medications in Aurum database. The file listed product codes for anti-viral medications in Aurum database.
DOI: 10.6084/m9.figshare.26622073
title: Additional file 6 of Global analysis of suppressor mutations that rescue human genetic defects

description: Additional file 6: Data S5. Experimental validation of predicted suppressor genes. Experimental identification of suppressor genes of FANCA using CRISPR-Cas9 knockout screens. This file contains normalized read counts for 71,090 gRNAs across 12 samples: two timepoints (0 and 18 days of cisplatin treatment) of one wild-type and two FANCA knockout cell lines each screened in duplicate.
DOI: 10.6084/m9.figshare.26622088
title: Additional file 6 of Profiles and integration of the gut microbiome and fecal metabolites in severe intrahepatic cholestasis of pregnancy

description: Additional file file 6: Table S1. Differential bacteria at genus level among groups of control, mild ICP and severe ICP
DOI: 10.6084/m9.figshare.26621899
title: Additional file 3 of The association of herpes zoster and influenza vaccinations with the risk of developing dementia: a population-based cohort study within the UK Clinical Practice Research Datalink

description: Additional file 3. The distribution of the number of matched comparators – by matched set. The file depicted number and percentage of matched comparators.
DOI: 10.6084/m9.figshare.26621896.v1
title: Additional file 2 of The association of herpes zoster and influenza vaccinations with the risk of developing dementia: a population-based cohort study within the UK Clinical Practice Research Datalink

description: Additional file 2. Medical codes for herpes zoster vaccination in Aurum database. The file listed medical codes for herpes zoster vaccination used in Aurum database.
DOI: 10.6084/m9.figshare.26621923
title: Additional file 11 of The association of herpes zoster and influenza vaccinations with the risk of developing dementia: a population-based cohort study within the UK Clinical Practice Research Datalink

description: Additional file 11. Codes for ethnicity in Aurum database.  The file listed codes for ethnicity.
DOI: 10.15468/dl.p5qrpk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((147.852968 -33.072168, 147.855214 -33.072168, 147.855214 -33.067676, 147.859705 -33.067676, 147.859705 -33.065431, 147.852968 -33.065431, 147.852968 -33.072168)), ((147.852968 -33.072168, 147.846231 -33.072168, 147.846231 -33.074414, 147.839493 -33.074414, 147.839493 -33.081151, 147.846231 -33.081151, 147.846231 -33.078905, 147.848476 -33.078905, 147.848476 -33.074414, 147.852968 -33.074414, 147.852968 -33.072168)), ((147.859705 -33.065431, 147.861951 -33.065431, 147.861951 -33.063185, 147.859705 -33.063185, 147.859705 -33.065431)), ((147.859705 -33.067676, 147.859705 -33.072168, 147.861951 -33.072168, 147.861951 -33.067676, 147.859705 -33.067676)), ((147.859705 -33.072168, 147.855214 -33.072168, 147.855214 -33.074414, 147.859705 -33.074414, 147.859705 -33.072168)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068208-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26578877.v1
title: Additional file 2 of Gene enrichment and co-expression analysis shed light on transcriptional responses to Ralstonia solanacearum in tomato

description: Additional file 2: Table S1. Distribution of differentially expressed genes in resistant and susceptible tomato lines
DOI: 10.6084/m9.figshare.26621902
title: Additional file 4 of The association of herpes zoster and influenza vaccinations with the risk of developing dementia: a population-based cohort study within the UK Clinical Practice Research Datalink

description: Additional file 4. Product codes for influenza vaccine in Aurum database. The file listed product codes for influenza vaccine used in Aurum database.
DOI: 10.6084/m9.figshare.26621908.v1
title: Additional file 6 of The association of herpes zoster and influenza vaccinations with the risk of developing dementia: a population-based cohort study within the UK Clinical Practice Research Datalink

description: Additional file 6. Medical codes for dementia in Aurum database. The file listed medical codes for dementia outcome in Aurum database.
DOI: 10.6084/m9.figshare.26578880
title: Additional file 3 of Gene enrichment and co-expression analysis shed light on transcriptional responses to Ralstonia solanacearum in tomato

description: Additional file 3: Table S2. GO_BP and KEGG enrichment of genes in the Meturquoise and MEgreen modules
DOI: 10.6084/m9.figshare.26578886
title: Additional file 5 of Gene enrichment and co-expression analysis shed light on transcriptional responses to Ralstonia solanacearum in tomato

description: Additional file 5: Table S4. The top 20 GSEA pathways of genes in resistant and susceptible tomato lines
DOI: 10.6084/m9.figshare.26621914.v1
title: Additional file 8 of The association of herpes zoster and influenza vaccinations with the risk of developing dementia: a population-based cohort study within the UK Clinical Practice Research Datalink

description: Additional file 8. Medical codes for Charlson Comorbidity Index in Aurum database. The file listed medical codes for Charlson Comorbidity Index used in Aurum database.
DOI: 10.6084/m9.figshare.26621917
title: Additional file 9 of The association of herpes zoster and influenza vaccinations with the risk of developing dementia: a population-based cohort study within the UK Clinical Practice Research Datalink

description: Additional file 9. International Classification of Diseases codes for Charlson Comorbidity Index in Aurum database. The file listed ICD-10 codes for Charlson Comorbidity Index used in Aurum database.
DOI: 10.6084/m9.figshare.26578886.v1
title: Additional file 5 of Gene enrichment and co-expression analysis shed light on transcriptional responses to Ralstonia solanacearum in tomato

description: Additional file 5: Table S4. The top 20 GSEA pathways of genes in resistant and susceptible tomato lines
DOI: 10.6084/m9.figshare.26622064.v1
title: Additional file 3 of Global analysis of suppressor mutations that rescue human genetic defects

description: Additional file 3: Data S2. Suppression interactions curated from the literature. This file contains the suppression interactions that met our selection criteria (see Methods), along with the corresponding PubMed IDs, details on the query and suppressor genes and mutations, and information on the conditions under which the interactions were identified. It also lists the probability of loss-of-function intolerance and median fitness of gene knockout across cancer cell lines for query and suppressor genes, and contains information on which interactions are annotated to have protein-protein interactions, negative genetic interactions, or positive genetic interactions in the BioGRID, and the mechanistic classes to which the interactions were assigned. Interactions that have been described in more than one paper are listed multiple times.
DOI: 10.6084/m9.figshare.26622064
title: Additional file 3 of Global analysis of suppressor mutations that rescue human genetic defects

description: Additional file 3: Data S2. Suppression interactions curated from the literature. This file contains the suppression interactions that met our selection criteria (see Methods), along with the corresponding PubMed IDs, details on the query and suppressor genes and mutations, and information on the conditions under which the interactions were identified. It also lists the probability of loss-of-function intolerance and median fitness of gene knockout across cancer cell lines for query and suppressor genes, and contains information on which interactions are annotated to have protein-protein interactions, negative genetic interactions, or positive genetic interactions in the BioGRID, and the mechanistic classes to which the interactions were assigned. Interactions that have been described in more than one paper are listed multiple times.
DOI: 10.6084/m9.figshare.26622067.v1
title: Additional file 4 of Global analysis of suppressor mutations that rescue human genetic defects

description: Additional file 4: Data S3. Suppressor gene predictions using the functional prioritization model. For each of the 93 query genes in our dataset, all genes in the human genome were ranked based on their likeliness of being a suppressor gene using a functional prioritization model. Listed are query gene name, suppressor gene name, prediction score, and prediction rank. Prediction scores range from 0 to 1111. Higher prediction scores or lower prediction ranks correspond to a higher likeliness of a gene to be a suppressor of the given query gene.
DOI: 10.6084/m9.figshare.26621926.v1
title: Additional file 12 of The association of herpes zoster and influenza vaccinations with the risk of developing dementia: a population-based cohort study within the UK Clinical Practice Research Datalink

description: Additional file 12. The numbers and rates of people developing dementia in zoster vaccinated and unvaccinated cohorts. The file depicted numbers and rates per 1000 year of people developing dementia in zoster vaccinated and unvaccinated cohorts.
DOI: 10.6084/m9.figshare.24234331
title: Additional file 2 of Insights into the genetics of menopausal vasomotor symptoms: genome-wide analyses of routinely-collected primary care health records

description: Additional file 2: Supplementary Table 1. Read v2 and CTV3 codes used to identify women with vasomotor symptoms. Supplementary Table 2. Numbers of women included in the genome-wide analyses. Supplementary Table 3. Loss-of-function variants in TACR3 identified in analysis of UK Biobank exome sequencing data. Supplementary Table 4. Results of gene burden and single variant analyses of TACR3 in exome sequencing data from UK Biobank. Supplementary Table 5. Comparison of the effects on VMS and age at menarche of rs34867104 (GWAS signal) and rs144292455 (rare loss of function variant) in TACR3. Supplementary Table 6. Conditional analyses of variants in TACR3 associated with VMS and age at menarche. Supplementary Table 7. Genetic signals identified by GWAS of HRT phenotypes. Supplementary Table 8. Results of Mendelian randomisation analyses of association of age at menopause with HRT use. Supplementary Table 9. Heterogeneity in effect of genetic variants on HRT use before and after 2002. Supplementary Table 10. PsychENCODE brain eQTL data for TACR3.
DOI: 10.6084/m9.figshare.26622070
title: Additional file 5 of Global analysis of suppressor mutations that rescue human genetic defects

description: Additional file 5: Data S4. Suppressor gene predictions using the random forest classifier. For each of the 93 query genes in our dataset, all genes in the human genome were ranked based on their likeliness of being a suppressor gene using a random forest classifier. Listed are query gene name, suppressor gene name, prediction score, and prediction rank. Prediction scores range from 0 to 1. Higher prediction scores or lower prediction ranks correspond to a higher likeliness of a gene to be a suppressor of the given query gene.
DOI: 10.6084/m9.figshare.26622070.v1
title: Additional file 5 of Global analysis of suppressor mutations that rescue human genetic defects

description: Additional file 5: Data S4. Suppressor gene predictions using the random forest classifier. For each of the 93 query genes in our dataset, all genes in the human genome were ranked based on their likeliness of being a suppressor gene using a random forest classifier. Listed are query gene name, suppressor gene name, prediction score, and prediction rank. Prediction scores range from 0 to 1. Higher prediction scores or lower prediction ranks correspond to a higher likeliness of a gene to be a suppressor of the given query gene.
DOI: 10.6084/m9.figshare.24240129.v1
title: Additional file 1 of Gastric cancer-derived LBP promotes liver metastasis by driving intrahepatic fibrotic pre-metastatic niche formation

description: Additional file 1.
DOI: 10.6084/m9.figshare.26578859.v1
title: Additional file 1 of Exploiting a targeted resistome sequencing approach in assessing antimicrobial resistance in retail foods

description: Additional file 1. Sequence targets included in the bait-capture system described in this study.
DOI: 10.6084/m9.figshare.26578859
title: Additional file 1 of Exploiting a targeted resistome sequencing approach in assessing antimicrobial resistance in retail foods

description: Additional file 1. Sequence targets included in the bait-capture system described in this study.
DOI: 10.15468/dl.cpkmpf
title: Occurrence Download

description: A dataset containing 38976 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Salmo salar Linnaeus, 1758"
 ]
}

 The dataset includes 38976 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068209-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n4fnvn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.607556 -33.074414, 148.603065 -33.074414, 148.603065 -33.078905, 148.605311 -33.078905, 148.605311 -33.081151, 148.607556 -33.081151, 148.607556 -33.085643, 148.612048 -33.085643, 148.612048 -33.090134, 148.614294 -33.090134, 148.614294 -33.085643, 148.618785 -33.085643, 148.618785 -33.078905, 148.614294 -33.078905, 148.614294 -33.074414, 148.618785 -33.074414, 148.618785 -33.072168, 148.625523 -33.072168, 148.625523 -33.067676, 148.627769 -33.067676, 148.627769 -33.065431, 148.625523 -33.065431, 148.625523 -33.063185, 148.618785 -33.063185, 148.618785 -33.067676, 148.612048 -33.067676, 148.612048 -33.072168, 148.607556 -33.072168, 148.607556 -33.074414), (148.607556 -33.074414, 148.612048 -33.074414, 148.612048 -33.078905, 148.607556 -33.078905, 148.607556 -33.074414))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068210-240626123714530/datasets/export for details.
DOI: 10.15468/dl.un27ep
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.549166 -33.078905, 148.549166 -33.081151, 148.551412 -33.081151, 148.551412 -33.078905, 148.549166 -33.078905))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068211-240626123714530/datasets/export for details.
DOI: 10.15468/dl.3gtafh
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (5a45153b-bdf9-44ae-b7a7-e3261896540b, 0e2f2e28-7790-4c82-b8fb-6ef7b4c764e2)",
 "TaxonKey is Dendrobates truncatus (Cope, 1861)"
 ]
}

 The dataset's 1 records were derived from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068206-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26622127
title: Additional file 5 of Gastric cancer-derived LBP promotes liver metastasis by driving intrahepatic fibrotic pre-metastatic niche formation

description: Additional file 5.
DOI: 10.6084/m9.figshare.24234113.v1
title: Additional file 1 of Leptospirosis in humans and selected animals in Sub-Saharan Africa, 2014–2022: a systematic review and meta-analysis

description: Additional file 1.