cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.16457628
title: Dataset and Code for PIDE Binary Classification Model

description: phage.fasta: 263,843 phage protein sequences (from UniProt).




bacteria.fasta: 263,843 bacterial protein sequences (from UniProt).




sequence_*.txt: Embedding files for train/val/test sets (precomputed from input sequences).




label_*.txt: Corresponding binary labels (0: bacteria, 1: phage).




*.py files: Training and evaluation scripts (input: embedding files).
DOI: 10.5281/zenodo.16457629
title: Dataset and Code for PIDE Binary Classification Model

description: phage.fasta: 263,843 phage protein sequences (from UniProt).




bacteria.fasta: 263,843 bacterial protein sequences (from UniProt).




sequence_*.txt: Embedding files for train/val/test sets (precomputed from input sequences).




label_*.txt: Corresponding binary labels (0: bacteria, 1: phage).




*.py files: Training and evaluation scripts (input: embedding files).
DOI: 10.15468/dl.axktxy
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucalyptus globulus",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 86 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053477-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c7zn84
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lissachatina fulica",
 "Country is Saint Lucia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 32 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053481-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cpxe7e
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lissachatina fulica",
 "Country is Samoa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 40 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053482-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57783/c9js-mm91
title: LibreChat
DOI: 10.15468/dl.z5yx3h
title: Occurrence Download

description: A dataset containing 25729 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cyanoliseus patagonus)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 25729 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053480-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zmj2x7
title: Occurrence Download

description: A dataset containing 2198 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucalyptus globulus",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2198 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053479-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16472616
title: DAO Analyzer dataset

description: DAO-Analyzer's dataset.


Explore data from Decentralized Autonomous Organizations deployed on the DAOstack, DAOhaus and Aragon platforms.
description: DAO-Analyzer is created under the umbrella of multiple research projects:



Chain Community, funded by the Spanish Ministry of Science and Innovation (RTI2018‐096820‐A‐I00) and led by Javier Arroyo and Samer Hassan

P2P Models, funded by the European Research Council (ERC-2017-STG 625 grant no.: 75920), led by Samer Hassan.

DAOapplications, funded by the Spanish Ministry of Science and Innovation (PID2021-127956OB-I00) and led by Javier Arroyo, Samer Hassan and maria Cruz Valiente
DOI: 10.1594/pangaea.776477
title: (Table 1) SHRIMP zircon U-Pb isotopic data for the Late Permian to Early Jurassic plutons in the northern Gyeongsang basin, Korea
DOI: 10.1594/pangaea.965322
title: Concentrations of trace elements measured in soils (0 - 10 cm) at Lhù'ààn Mân' (Kluane Lake, Yukon Territory, Canada) in August 2021
DOI: 10.15468/dl.72hvzg
title: Occurrence Download

description: A dataset containing 3250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vincetoxicum nigrum",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3250 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053484-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.767583
title: Seawater carbonate chemistry and biological processes of oysters Crassostrea virginica during experiments, 2010

description: Estuarine organisms are exposed to periodic strong fluctuations in seawater pH driven by biological carbon dioxide (CO2) production, which may in the future be further exacerbated by the ocean acidification associated with the global rise in CO2. Calcium carbonate-producing marine species such as mollusks are expected to be vulnerable to acidification of estuarine waters, since elevated CO2 concentration and lower pH lead to a decrease in the degree of saturation of water with respect to calcium carbonate, potentially affecting biomineralization. Our study demonstrates that the increase in CO2 partial pressure (pCO2) in seawater and associated decrease in pH within the environmentally relevant range for estuaries have negative effects on physiology, rates of shell deposition and mechanical properties of the shells of eastern oysters Crassostrea virginica (Gmelin). High CO2 levels (pH ~7.5, pCO2 ~3500 µatm) caused significant increases in juvenile mortality rates and inhibited both shell and soft-body growth compared to the control conditions (pH ~8.2, pCO2 ~380 µatm). Furthermore, elevated CO2 concentrations resulted in higher standard metabolic rates in oyster juveniles, likely due to the higher energy cost of homeostasis. The high CO2 conditions also led to changes in the ultrastructure and mechanical properties of shells, including increased thickness of the calcite laths within the hypostracum and reduced hardness and fracture toughness of the shells, indicating that elevated CO2 levels have negative effects on the biomineralization process. These data strongly suggest that the rise in CO2 can impact physiology and biomineralization in marine calcifiers such as eastern oysters, threatening their survival and potentially leading to profound ecological and economic impacts in estuarine ecosystems.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Lavigne and Gattuso, 2011) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI).
description: Supplement to: Beniash, Elia; Ivanina, Anna; Lieb, Nicholas S; Kurochkin, Ilya; Sokolova, Inna A (2010): Elevated level of carbon dioxide affects metabolism and shell formation in oysters Crassostrea virginica. Marine Ecology Progress Series, 419, 95-108
DOI: 10.1594/pangaea.902552
title: Exposure conditions

description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-06-10.
DOI: 10.1594/pangaea.902573
title: Energy cost of protei synthesis

description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-06-10.
DOI: 10.15468/dl.nf7xn5
title: Occurrence Download

description: A dataset containing 4304 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cyanoloxia glaucocaerulea)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 4304 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053483-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.776481
title: (Table 2) Whole-rock major and trace element compositions of granite samples from the Jangsari pluton in southeastern Korea
DOI: 10.1594/pangaea.902572
title: Energy cost of H+ transport

description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-06-10.
DOI: 10.1594/pangaea.776484
title: (Table 3) Whole-rock Sm-Nd isotopic data for the Jangsari pluton in southeastern Korea
DOI: 10.1594/pangaea.902571
title: Energy cost of Ca2+ tranposrt

description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2016) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2019-06-10.
DOI: 10.1594/pangaea.860868
title: Interactive effects of salinity and elevated CO2 levels on juvenile eastern oysters, Crassostrea virginica

description: Rising levels of atmospheric CO2 lead to acidification of the ocean and alter seawater carbonate chemistry, which can negatively impact calcifying organisms, including mollusks. In estuaries, exposure to elevated CO2 levels often co-occurs with other stressors, such as reduced salinity, which enhances the acidification trend, affects ion and acid-base regulation of estuarine calcifiers and modifies their response to ocean acidification. We studied the interactive effects of salinity and partial pressure of CO2 (PCO2) on biomineralization and energy homeostasis in juveniles of the eastern oyster, Crassostrea virginica, a common estuarine bivalve. Juveniles were exposed for 11 weeks to one of two environmentally relevant salinities (30 or 15 PSU) either at current atmospheric PCO2 (400 µatm, normocapnia) or PCO2 projected by moderate IPCC scenarios for the year 2100 (700-800 µatm, hypercapnia). Exposure of the juvenile oysters to elevated PCO2 and/or low salinity led to a significant increase in mortality, reduction of tissue energy stores (glycogen and lipid) and negative soft tissue growth, indicating energy deficiency. Interestingly, tissue ATP levels were not affected by exposure to changing salinity and PCO2, suggesting that juvenile oysters maintain their cellular energy status at the expense of lipid and glycogen stores. At the same time, no compensatory upregulation of carbonic anhydrase activity was found under the conditions of low salinity and high PCO2. Metabolic profiling using magnetic resonance spectroscopy revealed altered metabolite status following low salinity exposure; specifically, acetate levels were lower in hypercapnic than in normocapnic individuals at low salinity. Combined exposure to hypercapnia and low salinity negatively affected mechanical properties of shells of the juveniles, resulting in reduced hardness and fracture resistance. Thus, our data suggest that the combined effects of elevated PCO2 and fluctuating salinity may jeopardize the survival of eastern oysters because of weakening of their shells and increased energy consumption.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2016-05-26.
description: Supplement to: Dickinson, Gary H; Ivanina, Anna; Matoo, Omera B; Pörtner, Hans-Otto; Lannig, Gisela; Bock, C; Beniash, Elia; Sokolova, Inna M (2011): Interactive effects of salinity and elevated CO2 levels on juvenile eastern oysters, Crassostrea virginica. Journal of Experimental Biology, 215(1), 29-43
DOI: 10.15468/dl.r2nr3c
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucalyptus globulus",
 "Country is Viet Nam",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053486-250717081556266/datasets/export for details.
DOI: 10.15468/dl.byfw6y
title: Occurrence Download

description: A dataset containing 650 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cyanoptila cumatilis)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 650 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053488-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ned6vw
title: Occurrence Download

description: A dataset containing 22035 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Pilularia globulifera"
 ]
}

 The dataset includes 22035 records from 377 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053485-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18650590
title: ВЛИЯНИЕ ЦИФРОВЫХ ТЕХНОЛОГИЙ НА КАЧЕСТВО ОБРАЗОВАНИЯ

description:  В статье исследуется влияние цифровых технологий на качество современного образования в условиях глобальной цифровизации общества. Рассматриваются ключевые направления внедрения информационно-коммуникационных технологий в образовательный процесс: дистанционное обучение, электронные образовательные платформы, мультимедийные средства, искусственный интеллект и адаптивные обучающие системы. Анализируется трансформация педагогических методов, изменение роли преподавателя и обучающегося, а также влияние цифровой среды на мотивацию и образовательные результаты. Выявлены как положительные эффекты цифровизации (доступность, персонализация, интерактивность), так и сопутствующие риски (цифровое неравенство, снижение когнитивной глубины обучения, перегрузка информацией). Сделан вывод о необходимости системного и научно обоснованного внедрения цифровых технологий для повышения качества образования.
DOI: 10.5281/zenodo.18650591
title: ВЛИЯНИЕ ЦИФРОВЫХ ТЕХНОЛОГИЙ НА КАЧЕСТВО ОБРАЗОВАНИЯ

description:  В статье исследуется влияние цифровых технологий на качество современного образования в условиях глобальной цифровизации общества. Рассматриваются ключевые направления внедрения информационно-коммуникационных технологий в образовательный процесс: дистанционное обучение, электронные образовательные платформы, мультимедийные средства, искусственный интеллект и адаптивные обучающие системы. Анализируется трансформация педагогических методов, изменение роли преподавателя и обучающегося, а также влияние цифровой среды на мотивацию и образовательные результаты. Выявлены как положительные эффекты цифровизации (доступность, персонализация, интерактивность), так и сопутствующие риски (цифровое неравенство, снижение когнитивной глубины обучения, перегрузка информацией). Сделан вывод о необходимости системного и научно обоснованного внедрения цифровых технологий для повышения качества образования.
DOI: 10.34740/kaggle/dsv/14850081
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.9th293
title: Occurrence Download

description: A dataset containing 867 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Inga laevigata",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 867 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020724-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18650514
title: Extensive Lithological Diversity of Float Rocks at the Mount Washburn Mound in Neretva Vallis, Jezero Crater, Mars

description: Table S6: SuperCam LIBS elemental oxides (yellow cells not used; see manuscript text).
DOI: 10.5281/zenodo.18650619
title: quercus_turbinella_spades_02.fasta
DOI: 10.5281/zenodo.18650618
title: quercus_turbinella_spades_02.fasta
DOI: 10.15468/dl.squx7q
title: Occurrence Download

description: A dataset containing 1488 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Inga vera vera",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 1488 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020726-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wdbvea
title: Occurrence Download

description: A dataset containing 16851 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Cetorhinus maximus"
 ]
}

 The dataset includes 16851 records from 257 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020725-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60507/fk2/4kukxi/bcngv5
title: DR1_v1.annoV2.cds.fasta.gz

description: CDS
DOI: 10.60507/fk2/4kukxi/jhk0ya
title: DR1_v1.annoV2.anno.txt.gz

description: functional annotation
DOI: 10.60507/fk2/4kukxi/04rv0f
title: DR1_v1.annoV2.anno.gff.gz

description: structural annotation
DOI: 10.60507/fk2/4kukxi/m6he8q
title: DR1_v1.annoV2.genome.fasta.gz

description: genome sequence
DOI: 10.60507/fk2/4kukxi/5oxpws
title: DR1_v1.annoV2.pep.fasta.gz
DOI: 10.60507/fk2/4kukxi/c0qkwi
title: DR1_v1.annoV2.tpms.txt.gz
DOI: 10.60507/fk2/4kukxi/mut4h9
title: README.txt
DOI: 10.60507/fk2/4kukxi/fk019b
title: DR1_v1.annoV2.TEanno.gff3.gz

description: TE annotation
DOI: 10.60507/fk2/4kukxi
title: Digitalis purpurea genome sequence and annotation V2

description: Here we present a high-quality genome sequence and annotation of Digitalis purpurea (commonly known as foxglove), a plant valued both for its ornamental flowers and for producing the cardiac drug digoxin. The study aims to uncover the genetic basis of flower color variation in this species. Using ONT long-read sequencing data, we assembled the genome sequence of a magenta-flowering D. purpurea individual. We performed extensive gene prediction and functional annotation of protein-coding genes. Genes of the flavonoid biosynthesis were compared between magenta and white flowering individuals. Expression patterns were compared between different plant organs and between plants with different flower colors. Through these analyses, we identified a large insertion in the anthocyanidin synthase (ANS) that explains the differences between magenta and white flowers. 
This data publication contains the genome sequence with the corresponding annotation V2.
DOI: 10.60507/fk2/4kukxi/28wkgr
title: README.txt
DOI: 10.15468/dl.55q2n3
title: Occurrence Download

description: A dataset containing 2915 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (United Kingdom of Great Britain and Northern Ireland, France, Denmark, Belgium)",
 "TaxonKey is Papilio machaon",
 "Year 1000-1978"
 ]
}

 The dataset includes 2915 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020727-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/ydvjtbc6dw
title: Fluxograma: Desempenho diagnóstico da palpação de nervos periféricos em comparação com a ultrassonografia na neuropatia da hanseníase: avaliação prospectiva em ambiente clínico do mundo real

description: Fluxograma: Desempenho diagnóstico da palpação de nervos periféricos em comparação com a ultrassonografia na neuropatia da hanseníase: avaliação prospectiva em ambiente clínico do mundo real
DOI: 10.17632/ydvjtbc6dw.1
title: Fluxograma: Desempenho diagnóstico da palpação de nervos periféricos em comparação com a ultrassonografia na neuropatia da hanseníase: avaliação prospectiva em ambiente clínico do mundo real

description: Fluxograma: Desempenho diagnóstico da palpação de nervos periféricos em comparação com a ultrassonografia na neuropatia da hanseníase: avaliação prospectiva em ambiente clínico do mundo real
DOI: 10.17632/r839mtn9mj.1
title: Enhancing the resistant starch content of cassava starch via heat-moisture treatment for application as a prebiotic in chicken feed

description: This study aimed to increase the resistant starch (RS) content of cassava starch via heat-moisture treatment (HMT) and evaluate its prebiotic potential in chicken feed.
DOI: 10.17632/s95w2ccyrc
title: Fungi play a more significant role than bacteria in increasing soil organic carbon through their necromass inputs after vegetation restoration in karst region of Southwest China.
DOI: 10.17632/s95w2ccyrc.1
title: Fungi play a more significant role than bacteria in increasing soil organic carbon through their necromass inputs after vegetation restoration in karst region of Southwest China.