cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5056786
title: A minireview of effects of maternal diet during pregnancy on postnatal vegetable consumption: Implications for future research (a new hypothesis) and recommendations

description: The flavor of the maternal diet is transferred to the amniotic fluid and in this way the amniotic fluid becomes a transmitter of flavor-related information, developing babies can perceive in uterus. We aimed to review the available evidence regarding the impact of prenatal exposure to flavor on postnatal vegetable-related eating behavior. Studies of our focus have been the ones that have ad hoc examined the association of prenatal experience with vegetable-related flavors with vegetable consumption in children. We have identified that some studies have found this association, against others. Particularly, the first group of studies found an increased vegetable intake at weaning and late childhood associated with prenatal flavor exposure. The second set, instead, did not find this association of variables at early childhood. We propose here that the vegetable type used in these last studies might explain this disparity of results, and suggest the following hypothesis to be tested in the future: prenatal exposure to nonbitter vegetables leads to an increased vegetable consumption at early childhood in comparison to prenatal exposure to bitter vegetables, postnatal exposure to vegetables and no exposure. The experimental design of this hypothesis as well as subsequent recommendations for future research and maternal diet are also here suggested.
DOI: 10.6084/m9.figshare.5056867.v1
title: landsat-scenes

description: some test data for stack overflow<br>
DOI: 10.6084/m9.figshare.5056786.v2
title: A minireview of effects of maternal diet during pregnancy on postnatal vegetable consumption: Implications for future research (a new hypothesis) and recommendations

description: The flavor of the maternal diet is transferred to the amniotic fluid and in this way the amniotic fluid becomes a transmitter of flavor-related information, developing babies can perceive in uterus. We aimed to review the available evidence regarding the impact of prenatal exposure to flavor on postnatal vegetable-related eating behavior. Studies of our focus have been the ones that have ad hoc examined the association of prenatal experience with vegetable-related flavors with vegetable consumption in children. We have identified that some studies have found this association, against others. Particularly, the first group of studies found an increased vegetable intake at weaning and late childhood associated with prenatal flavor exposure. The second set, instead, did not find this association of variables at early childhood. We propose here that the vegetable type used in these last studies might explain this disparity of results, and suggest the following hypothesis to be tested in the future: prenatal exposure to nonbitter vegetables leads to an increased vegetable consumption at early childhood in comparison to prenatal exposure to bitter vegetables, postnatal exposure to vegetables and no exposure. The experimental design of this hypothesis as well as subsequent recommendations for future research and maternal diet are also here suggested.
DOI: 10.6084/m9.figshare.5056486
title: Aridity decouples C:N:P stoichiometry across multiple trophic levels in terrestrial ecosystems

description: Data from “M. Delgado-Baquerizo, D.J. Eldridge, F.T. Maestre, V. Ochoa, B. Gozalo, P.B. Reich, B.K. Singh. Aridity decouples C:N:P stoichiometry across multiple trophic levels in terrestrial ecosystems.” There are four spreadsheets with data. The spreadsheets named "Dataset_soil or tissues" contain the raw C:N:P data used in this paper. The spreadsheets "Metadata_soil or tissues" contain the associated metadata, where a description of all the variables and units can be found.
DOI: 10.6084/m9.figshare.5056786.v1
title: A minireview of effects of maternal diet during pregnancy on postnatal vegetable consumption: implications for future research (a new hypothesis) and recommendations

description: The flavor of the maternal diet is transferred to the amniotic fluid and in this way the amniotic fluid becomes a transmitter of flavor-related information, developing babies can perceive in uterus. We aimed to review the available evidence regarding the impact of prenatal exposure to flavor on postnatal vegetable-related eating behavior. Studies of our focus have been the ones that have ad hoc examined the association of prenatal experience with vegetable-related vegetables with vegetable consumption in children. We have identified that some studies have found this association, against others. Particularly, the first group of studies found an increased vegetable intake at weaning and late childhood associated with prenatal flavor exposure. The second set, instead, did not find this association of variables at early childhood. We propose here that the vegetable type used in these last studies might explain this disparity of results, and suggest the following hypothesis to be tested in the future: prenatal exposure to non-bitter vegetables leads to an increased vegetable consumption at early childhood in comparison to prenatal exposure to bitter vegetables, postnatal exposure to vegetables and no exposure. The experimental design of this hypothesis as well as subsequent recommendations for future research and maternal diet are also here suggested.
DOI: 10.6084/m9.figshare.5056486.v1
title: Aridity decouples C:N:P stoichiometry across multiple trophic levels in terrestrial ecosystems

description: Data from “M. Delgado-Baquerizo, D.J. Eldridge, F.T. Maestre, V. Ochoa, B. Gozalo, P.B. Reich, B.K. Singh. Aridity decouples C:N:P stoichiometry across multiple trophic levels in terrestrial ecosystems.” There are four spreadsheets with data. The spreadsheets named "Dataset_soil or tissues" contain the raw C:N:P data used in this paper. The spreadsheets "Metadata_soil or tissues" contain the associated metadata, where a description of all the variables and units can be found.
DOI: 10.6084/m9.figshare.5056456
title: Effects of ospemifene on vaginal epithelium of post-menopausal women

description: Ospemifene is a selective estrogen receptor modulator used for the treatment of vulvo-vaginal atrophy (VVA) in post-menopausal women. No direct evidence of its effects on histological features of the human vagina has been reported. To evaluate the effects of ospemifene on histological parameters, glycogen content, proliferation, and estrogen receptor α expression (ERα) of vaginal epithelium in post-menopausal women. Thirty-two post-menopausal women undergoing surgical procedures were enrolled. Sixteen subjects taking ospemifene at the time of inclusion (OSP) were compared to 16 subjects not taking any hormone (CTL). Vaginal biopsies were taken from the proximal and distal vaginal wall during surgery to evaluate histology, Ki-67 and ERα expression. OSP group showed thicker vaginal epithelium (349 ± 64 vs. 245 ± 53 μm, <i>p</i> + cells/mm, <i>p</i> p p
DOI: 10.6084/m9.figshare.5056450
title: Controlled release drug delivery via polymeric microspheres: a neat application of the spherical diffusion equation

description: Various applied mathematics undergraduate skills are demonstrated via an adaptation of Crank's axisymmetric spherical diffusion model. By the introduction of a one-parameter Heaviside initial condition, the pharmaceutically problematic initial mass flux is attenuated. Quantities germane to the pharmaceutical industry are examined and the model is tested with data derived from industry journals. A binomial algorithm for the acceleration of alternating sequences is demonstrated. The model is accompanied by a MAPLE worksheet for further student exploration.
DOI: 10.6084/m9.figshare.5056456.v1
title: Effects of ospemifene on vaginal epithelium of post-menopausal women

description: Ospemifene is a selective estrogen receptor modulator used for the treatment of vulvo-vaginal atrophy (VVA) in post-menopausal women. No direct evidence of its effects on histological features of the human vagina has been reported. To evaluate the effects of ospemifene on histological parameters, glycogen content, proliferation, and estrogen receptor α expression (ERα) of vaginal epithelium in post-menopausal women. Thirty-two post-menopausal women undergoing surgical procedures were enrolled. Sixteen subjects taking ospemifene at the time of inclusion (OSP) were compared to 16 subjects not taking any hormone (CTL). Vaginal biopsies were taken from the proximal and distal vaginal wall during surgery to evaluate histology, Ki-67 and ERα expression. OSP group showed thicker vaginal epithelium (349 ± 64 vs. 245 ± 53 μm, <i>p</i> + cells/mm, <i>p</i> p p
DOI: 10.6084/m9.figshare.5056447
title: Landscape-scale effects of geomorphological heterogeneity on variability of oak forest structure and composition in a monogenetic volcanic field

description: <i><b>Background</b></i>: Eruptive events in monogenetic volcanic fields create mosaics of lava fields that result in different successional times and stages, and environmental conditions. Such geomorphological heterogeneity may be related to patterns of vegetation structure, diversity, and composition across a landscape. <i><b>Aims</b></i>: To examine landscape-scale effects of geomorphological heterogeneity on the spatial variability of oak forest structure and composition in a monogenetic volcanic field. <i><b>Methods</b></i>: We sampled oak forests in six geomorphological units within a monogenetic volcanic field in El Tepozteco National Park and carried out redundancy analyses to relate environmental variables to forest composition and structure. <i><b>Results</b></i>: Geomorphological heterogeneity explained 28.8 and 25.7% of the variation in canopy structure and composition, respectively, and 21.6% of the variation in understorey composition. Exposed rock was the most important predictor of understorey composition and canopy structure, while elevation was a better predictor of canopy composition. The role of chronic human disturbance as a driver of forest composition and structure was minor compared to that of geomorphological heterogeneity. <i><b>Conclusions</b></i>: The geomorphological heterogeneity created by volcanic activity in this landscape drives oak forest variability; however, considerable unexplained variation in vegetation traits remains, which could be associated with unmeasured dimensions of environmental heterogeneity, neutral processes, and the effects of long-term human activity in the area.
DOI: 10.6084/m9.figshare.5056441
title: Leaf_coordinates.zip

description: This file directory includes the outlines of 182,707 leaves analyzed in the manuscript "<b>Persistent homology demarcates a leaf morphospace</b>", by Mao Li et al. Separate folders contain text files with x,y coordinates for the leaves from each indicated plant group. Within each folder original x,y coordinates and scaled coordinates are provided.<br>Please cite the following authors and sources from which the leaf shapes are derived:<br>Li, Mao, et al. "Persistent homology demarcates a leaf morphospace." <i>bioRxiv</i> (2017): 151712.<br><br>Huff, Peter M., Peter Wilf, and Ebere J. Azumah. "Digital future for paleoclimate estimation from fossil leaves? Preliminary results." <i>Palaios</i> 18.3 (2003): 266-274.<br><br>Royer, Dana L., et al. "Correlations of climate and plant ecology to leaf size and shape: potential proxies for the fossil record." <i>American Journal of Botany</i> 92.7 (2005): 1141-1151.<br><br>Peppe, Daniel J., et al. "Sensitivity of leaf size and shape to climate: global patterns and paleoclimatic applications." <i>New Phytologist</i> 190.3 (2011): 724-739.<br><br>Kumar, Neeraj, et al. "Leafsnap: A computer vision system for automatic plant species identification." <i>Computer Vision–ECCV 2012</i> (2012): 502-516.<br><br><b>Relevant links:</b><br>Pre-print: https://doi.org/10.1101/151712<br>Digital leaf physiognomy: http://droyer.web.wesleyan.edu/DigitalLeafPhysiognomy.htm<br>Leafsnap: http://leafsnap.com/
DOI: 10.6084/m9.figshare.5056450.v1
title: Controlled release drug delivery via polymeric microspheres: a neat application of the spherical diffusion equation

description: Various applied mathematics undergraduate skills are demonstrated via an adaptation of Crank's axisymmetric spherical diffusion model. By the introduction of a one-parameter Heaviside initial condition, the pharmaceutically problematic initial mass flux is attenuated. Quantities germane to the pharmaceutical industry are examined and the model is tested with data derived from industry journals. A binomial algorithm for the acceleration of alternating sequences is demonstrated. The model is accompanied by a MAPLE worksheet for further student exploration.
DOI: 10.6084/m9.figshare.5056447.v1
title: Landscape-scale effects of geomorphological heterogeneity on variability of oak forest structure and composition in a monogenetic volcanic field

description: <i><b>Background</b></i>: Eruptive events in monogenetic volcanic fields create mosaics of lava fields that result in different successional times and stages, and environmental conditions. Such geomorphological heterogeneity may be related to patterns of vegetation structure, diversity, and composition across a landscape. <i><b>Aims</b></i>: To examine landscape-scale effects of geomorphological heterogeneity on the spatial variability of oak forest structure and composition in a monogenetic volcanic field. <i><b>Methods</b></i>: We sampled oak forests in six geomorphological units within a monogenetic volcanic field in El Tepozteco National Park and carried out redundancy analyses to relate environmental variables to forest composition and structure. <i><b>Results</b></i>: Geomorphological heterogeneity explained 28.8 and 25.7% of the variation in canopy structure and composition, respectively, and 21.6% of the variation in understorey composition. Exposed rock was the most important predictor of understorey composition and canopy structure, while elevation was a better predictor of canopy composition. The role of chronic human disturbance as a driver of forest composition and structure was minor compared to that of geomorphological heterogeneity. <i><b>Conclusions</b></i>: The geomorphological heterogeneity created by volcanic activity in this landscape drives oak forest variability; however, considerable unexplained variation in vegetation traits remains, which could be associated with unmeasured dimensions of environmental heterogeneity, neutral processes, and the effects of long-term human activity in the area.
DOI: 10.6084/m9.figshare.5056357
title: Exploring the structural requirements in multiple chemical scaffolds for the selective inhibition of <i>Plasmodium falciparum</i> calcium-dependent protein kinase-1 (<i>Pf</i>CDPK-1) by 3D-pharmacophore modelling, and docking studies

description: Current research on antimalarial protein kinases has provided an opportunity to design kinase-based antimalarial drugs. We have developed a common feature-based pharmacophore model from a set of multiple chemical scaffolds including derivatives of 3,6-imidazopyridazines, pyrazolo[2,3-<i>d</i>]pyrimidines and imidazo[1,5-<i>a</i>]pyrazines, in order to incorporate the maximum structural diversity information in the model for the <i>Plasmodium falciparum</i> calcium-dependent protein kinase-1 (<i>Pf</i>CDPK-1) target. The best pharmacophore model (Hypo-1) with the essential features of two hydrogen bond donors (HBD), one hydrophobic aromatic (HYAr) and one ring aromatic (RA) showed the classification accuracies of 86.27%, 78.43% and 100.00% in labelling the training and test set (test set-1 and test set-2) compounds into more active and less active classes. In order to identify the crucial interaction between multiple scaffold ligands and the target protein, we first developed the homology model using a template structure of <i>P. bergheii</i> (<i>Pb</i>CDPK1; PDB ID: 3Q5I), and thereafter performed the docking studies. The residues such as Lys85, Phe147, Tyr148, Leu198, Val211, and Asp212 were found to be the most important interacting residues for possessing <i>Pf</i>CDPK-1 inhibitory activity.
DOI: 10.6084/m9.figshare.5056360
title: Electrochemotherapy and calcium electroporation inducing a systemic immune response with local and distant remission of tumors in a patient with malignant melanoma – a case report

description: Electrochemotherapy and calcium electroporation inducing a systemic immune response with local and distant remission of tumors in a patient with malignant melanoma – a case report
DOI: 10.6084/m9.figshare.5056357.v1
title: Exploring the structural requirements in multiple chemical scaffolds for the selective inhibition of <i>Plasmodium falciparum</i> calcium-dependent protein kinase-1 (<i>Pf</i>CDPK-1) by 3D-pharmacophore modelling, and docking studies

description: Current research on antimalarial protein kinases has provided an opportunity to design kinase-based antimalarial drugs. We have developed a common feature-based pharmacophore model from a set of multiple chemical scaffolds including derivatives of 3,6-imidazopyridazines, pyrazolo[2,3-<i>d</i>]pyrimidines and imidazo[1,5-<i>a</i>]pyrazines, in order to incorporate the maximum structural diversity information in the model for the <i>Plasmodium falciparum</i> calcium-dependent protein kinase-1 (<i>Pf</i>CDPK-1) target. The best pharmacophore model (Hypo-1) with the essential features of two hydrogen bond donors (HBD), one hydrophobic aromatic (HYAr) and one ring aromatic (RA) showed the classification accuracies of 86.27%, 78.43% and 100.00% in labelling the training and test set (test set-1 and test set-2) compounds into more active and less active classes. In order to identify the crucial interaction between multiple scaffold ligands and the target protein, we first developed the homology model using a template structure of <i>P. bergheii</i> (<i>Pb</i>CDPK1; PDB ID: 3Q5I), and thereafter performed the docking studies. The residues such as Lys85, Phe147, Tyr148, Leu198, Val211, and Asp212 were found to be the most important interacting residues for possessing <i>Pf</i>CDPK-1 inhibitory activity.
DOI: 10.6084/m9.figshare.5056360.v1
title: Electrochemotherapy and calcium electroporation inducing a systemic immune response with local and distant remission of tumors in a patient with malignant melanoma – a case report

description: Electrochemotherapy and calcium electroporation inducing a systemic immune response with local and distant remission of tumors in a patient with malignant melanoma – a case report
DOI: 10.6084/m9.figshare.5056042
title: Patterns of postnatal growth in a small falcon, the lesser kestrel <i>Falco naumanni</i> (Fleischer, 1818) (Aves: Falconidae)

description: Following a dramatic decline, the lesser kestrel <i>Falco naumanni</i> global population has recently stabilised, although it is still fluctuating in several countries, including Greece. Nestling growth rates and size at fledging greatly influence future survival and reproductive success, and therefore the study of postnatal growth can aid the understanding of population dynamics and the conservation of avian populations. We quantified body mass and morphological traits in female and male lesser kestrel nestlings from a lowland Greek breeding population. Nonlinear mixed models were used to describe and compare growth trajectories. Growth in body mass, tarsus and bill reached asymptotic values before fledging and was best described by the logistic equation, whereas total length grew linearly beyond the fledging phase. Random variation was found in the asymptote in body mass, the inflection point in body mass, tarsus and bill lengths and the intercept in total length, being substantially higher between nests than amongst siblings, implying differences in parental quality between nests and also an even distribution of parental care amongst siblings. Random effects were not observed on the growth rate constant, supporting the hypothesis that it varies little within populations. Females were signiﬁcantly heavier and had longer bills and total length than males, whereas males were similar to females in tarsus growth. Nonlinear mixed models allowed us to describe a stage of avian life vital for future survival and reproductive output and reveal variation between nests, nestlings and the sexes.
DOI: 10.6084/m9.figshare.5056042.v1
title: Patterns of postnatal growth in a small falcon, the lesser kestrel <i>Falco naumanni</i> (Fleischer, 1818) (Aves: Falconidae)

description: Following a dramatic decline, the lesser kestrel <i>Falco naumanni</i> global population has recently stabilised, although it is still fluctuating in several countries, including Greece. Nestling growth rates and size at fledging greatly influence future survival and reproductive success, and therefore the study of postnatal growth can aid the understanding of population dynamics and the conservation of avian populations. We quantified body mass and morphological traits in female and male lesser kestrel nestlings from a lowland Greek breeding population. Nonlinear mixed models were used to describe and compare growth trajectories. Growth in body mass, tarsus and bill reached asymptotic values before fledging and was best described by the logistic equation, whereas total length grew linearly beyond the fledging phase. Random variation was found in the asymptote in body mass, the inflection point in body mass, tarsus and bill lengths and the intercept in total length, being substantially higher between nests than amongst siblings, implying differences in parental quality between nests and also an even distribution of parental care amongst siblings. Random effects were not observed on the growth rate constant, supporting the hypothesis that it varies little within populations. Females were signiﬁcantly heavier and had longer bills and total length than males, whereas males were similar to females in tarsus growth. Nonlinear mixed models allowed us to describe a stage of avian life vital for future survival and reproductive output and reveal variation between nests, nestlings and the sexes.
DOI: 10.6084/m9.figshare.5054029
title: Virology Meeting Speaker Gender Histories

description: We compiled the full speaker rosters of invited speakers over the past 35 years for four prominent international virology conferences, the American Society for Virology Annual Meeting (ASV), the International Herpesvirus Workshop (IHW), the Positive-strand RNA Virus Symposium (PSR), and the Gordon Research Conference on Viruses & Cells (GRC). The sort able data sets are cross-indexed by unique names, gender, year and repeat invitations<br>
DOI: 10.6084/m9.figshare.5054017
title: OpenCitations Corpus dataset of all the resource embodiments, archived on 2017-05-25

description: This archive contains the dump of the OpenCitation Corpus (OCC, http://opencitations.net) dataset about resource embodiments, created regularly every month.<br><br>After unzipping the archive, Disk ARchive (DAR, http://dar.linux.free.fr/, a multi-platform archive tool for managing huge amount of data) is needed for recreating the whole structure. For extracting the DAR archive, please run the command<br><br>dar -x [archive-name]<br><br>Where "[archive-name"] is the name of the DAR file without final package number and extension. E.g.:<br><br>dar -x 2016-09-23-corpus_re<br><br>For further questions, comments, and suggestions please don't hesitate to contact Silvio Peroni at essepuntato@opencitations.net.