cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6300133
title: Kinematic catalog of 2,174 planet host stars from Planet across space and time (PAST). I

description: We present a catalog of kinematic properties (i.e., Galactic positions, velocities, and the relative membership probabilities among the thin disk, thick disk, Hercules stream, and the halo) as well as other basic stellar parameters (e.g., effective temperature, metallicity) for 2174 host stars of 2872 planets by combining data from Gaia DR2, LAMOST DR4, APOGEE DR16, RAVE DR5, and the NASA exoplanet archive by applying the revised kinematic methods from Planet across space and time (PAST). I. we will continue to update our catalogue with the release of new data in the future.
description: {"references": ["Chen D. C., et al. ApJ, 2021, 909, 115"]}
DOI: 10.5281/zenodo.6300132
title: Kinematic catalog of 2,174 planet host stars from Planet across space and time (PAST). I

description: We present a catalog of kinematic properties (i.e., Galactic positions, velocities, and the relative membership probabilities among the thin disk, thick disk, Hercules stream, and the halo) as well as other basic stellar parameters (e.g., effective temperature, metallicity) for 2174 host stars of 2872 planets by combining data from Gaia DR2, LAMOST DR4, APOGEE DR16, RAVE DR5, and the NASA exoplanet archive by applying the revised kinematic methods from Planet across space and time (PAST). I. we will continue to update our catalogue with the release of new data in the future.
description: {"references": ["Chen D. C., et al. ApJ, 2021, 909, 115"]}
DOI: 10.5281/zenodo.6210967
title: Astrophysical Templates for Crocker, Macias, et al. (2022)

description: Astrophysical Templates for Crocker & Macias, et al. (2022)
DOI: 10.5281/zenodo.6210966
title: Astrophysical Templates for Crocker, Macias, et al. (2022)

description: Astrophysical Templates for Crocker & Macias, et al. (2022)
DOI: 10.6084/m9.figshare.19449842.v1
title: Energia_e_emissoes_2008.xlsx

description: Cálculo dos coeficientes de energia e carbono para a matriz energética brasileira de 2008.
DOI: 10.6084/m9.figshare.19449833
title: Studies on Immersive Journalism in 2020

description: Dataset "Studies on Immersive Journalism in 2020" result of the master's degree in journalism obtained in 2021 (ROCHA, 2021). ACCESS IN: https://www.researchgate.net/publication/358830690_Dissertacao_de_Mestrado_EXPERIENCIAS_E_SENSACOES_O_CONSUMO_DE_JORNALISMO_IMERSIVO
DOI: 10.6084/m9.figshare.19449833.v1
title: Studies on Immersive Journalism in 2020

description: Dataset "Studies on Immersive Journalism in 2020" result of the master's degree in journalism obtained in 2021 (ROCHA, 2021). ACCESS IN: https://www.researchgate.net/publication/358830690_Dissertacao_de_Mestrado_EXPERIENCIAS_E_SENSACOES_O_CONSUMO_DE_JORNALISMO_IMERSIVO
DOI: 10.1184/r1/19359989
title: Marginal Emission Factors for Indian Power Generation

description: Marginal emission factors for CO2, NOX, SO2, and PM2.5 estimated for Indian power generation in each Indian state. These are derived from a 2017-2018 reduced-form power dispatch model for India (doi: 10.1184/R1/14842224.v1) and a 2030-2031 full-form model (http://103.11.86.171/home) assuming Government of India targets.
DOI: 10.1184/r1/19359989.v1
title: Marginal Emission Factors for Indian Power Generation

description: Marginal emission factors for CO2, NOX, SO2, and PM2.5 estimated for Indian power generation in each Indian state. These are derived from a 2017-2018 reduced-form power dispatch model for India (doi: 10.1184/R1/14842224.v1) and a 2030-2031 full-form model (http://103.11.86.171/home) assuming Government of India targets.
DOI: 10.6084/m9.figshare.14228927
title: Results of Meta-Analysis of differences in sex by newborn and child blood DNA methylation

description: We performed a meta-analysis of the association of sex and cord blood DNA methylation at over 450,000 CpG sites in 8,438 newborns from 17 cohorts participating in the Pregnancy And Childhood Epigenetics (PACE) Consortium. The tables presented here include the summary statistics from the genome-wide DNA methylation meta-analysis in cord blood and blood specimens collected from older children. The specific methods used can be found in the following publication: https://doi.org/10.1016/j.mrrev.2022.108415
DOI: 10.6084/m9.figshare.14228927.v1
title: Results of Meta-Analysis of differences in sex by newborn and child blood DNA methylation

description: We performed a meta-analysis of the association of sex and cord blood DNA methylation at over 450,000 CpG sites in 8,438 newborns from 17 cohorts participating in the Pregnancy And Childhood Epigenetics (PACE) Consortium. The tables presented here include the summary statistics from the genome-wide DNA methylation meta-analysis in cord blood and blood specimens collected from older children. The specific methods used can be found in the following publication: https://doi.org/10.1016/j.mrrev.2022.108415
DOI: 10.26207/gvzr-5409
title: Active vision shapes and coordinates flight motor responses in flies
DOI: 10.6084/m9.figshare.19449893
title: Material complementario

description: Este archivo e excel contiene hojas de calculo usadas para graficos en un artículo
DOI: 10.6084/m9.figshare.19449926
title: studies on Immersive Journalism in the last decade (2010-2019)

description: Dataset "Studies on Immersive Journalism in 2020" result of the master's degree in journalism obtained in 2021 (ROCHA, 2021). ACCESS IN: https://www.researchgate.net/publication/358830690_Dissertacao_de_Mestrado_EXPERIENCIAS_E_SENSACOES_O_CONSUMO_DE_JORNALISMO_IMERSIVO<br>
DOI: 10.6084/m9.figshare.19449926.v1
title: studies on Immersive Journalism in the last decade (2010-2019)

description: Dataset "Studies on Immersive Journalism in 2020" result of the master's degree in journalism obtained in 2021 (ROCHA, 2021). ACCESS IN: https://www.researchgate.net/publication/358830690_Dissertacao_de_Mestrado_EXPERIENCIAS_E_SENSACOES_O_CONSUMO_DE_JORNALISMO_IMERSIVO<br>
DOI: 10.5281/zenodo.6394846
title: Ricinus marginatus decontaminated FSCR

description: .
DOI: 10.5281/zenodo.6394845
title: Ricinus marginatus decontaminated FSCR

description: .
DOI: 10.34740/kaggle/dsv/3378112
title: Vegetables Dataset for Object Detection
DOI: 10.6084/m9.figshare.19449935
title: references with the highest number of occurrences in studies on Immersive Journalism between 2010-2019

description: Dataset "Studies on Immersive Journalism in 2020" result of the master's degree in journalism obtained in 2021 (ROCHA, 2021). ACCESS IN: https://www.researchgate.net/publication/358830690_Dissertacao_de_Mestrado_EXPERIENCIAS_E_SENSACOES_O_CONSUMO_DE_JORNALISMO_IMERSIVO<br>
DOI: 10.6084/m9.figshare.19449935.v1
title: references with the highest number of occurrences in studies on Immersive Journalism between 2010-2019

description: Dataset "Studies on Immersive Journalism in 2020" result of the master's degree in journalism obtained in 2021 (ROCHA, 2021). ACCESS IN: https://www.researchgate.net/publication/358830690_Dissertacao_de_Mestrado_EXPERIENCIAS_E_SENSACOES_O_CONSUMO_DE_JORNALISMO_IMERSIVO<br>
DOI: 10.6084/m9.figshare.19449842
title: Energia_e_emissoes_2008.xlsx

description: Cálculo dos coeficientes de energia e carbono para a matriz energética brasileira de 2008.
DOI: 10.6084/m9.figshare.19449842.v3
title: Energia_e_emissoes_2008.xlsx

description: Cálculo dos coeficientes de energia e carbono para a matriz energética brasileira de 2008.
DOI: 10.6084/m9.figshare.19449842.v2
title: Energia_e_emissoes_2008.xlsx

description: Cálculo dos coeficientes de energia e carbono para a matriz energética brasileira de 2008.
DOI: 10.25345/c59g5gh9w
title: MassIVE MSV000089148 - 21M032 CACAO LIPIDOMICA NEGATIVO
title: CACAO GNPS LIPIDOMICA NEGATIVO AGILENT PRUEBA GNPS
DOI: 10.34740/kaggle/dsv/3376422
title: Melanoma Skin Cancer Dataset of 10000 Images
DOI: 10.3886/e166321
title: Resilience of Individuals Living with Sickle Cell Disease during the COVID-19 Pandemic

description: This project studied 97 adults living with sickle cell disease (SCD) in the US. Data was merged from two parent studies (INSIGHTS Study NCT02156102; Living with SCD in the COVID-19 Pandemic Study NCT04417673) in order to focus on changes over time in resilience, perceived stress, emotional distress, and physical and mental health. Results showed that the psychological resilience of our study cohort had significantly decreased (0.19, p=0.01) over time. Resilience during the pandemic was associated with better mental health and physical health and lower perceived stress and emotional distress.
description: Presence of Common Scales: Brief Resilience Scale<br>Cohen Perceived Stress<br>ASCQ-Me Emotional Impact Subscale<br>PROMIS Global Mental and Physical Health Scales
DOI: 10.7910/dvn/rt4dp2
title: Dias potenciais de gravidez perdidos (DPGP): uma medida inovadora da idade gestacional para avaliar intervenções e resultados de saúde materno-infantil

description: O projeto "Dias Potenciais de Gravizes Perdidos (DPGP): uma medida inovadora de idade gestacional para avaliar intervenções e resultados de saúde materno-infantil" buscou realizar um estudo sobre a avaliação da idade gestacional, e das consequências de nascimentos precoces para a população. A partir disso, foi desenvolvido um indicador de saúde que mede a perda no tempo de gestação, comparando-a com o tempo de gestação esperado. O projeto integrou dados do sistema de nascidos vivos (SINASC) e do sistema de informações de mortalidade (SIM). Ambos sistemas são de notificação compulsória dos nascidos vivos e dos óbitos em território brasileiro, respectivamente. O SINASC possui 52 variáveis que abrangem dados estatísticos, sócio-demográficos e epidemiológicos. O SIM possui 59 variáveis. Foram conduzidas duas análises a partir de um corte espacial dos dados: estado de São Paulo e nacional. Na análise do estado de SP, a base SINASC conta com 1.525.759 nascimentos entre 2012 e 2019, destes 504.302 com idade gestacional preenchida em dias. Na análise nacional, o número de nascidos vivos é de 8.854.727 nascidos vivos, com 3.329.339 registros contendo idade gestacional em dias. A integração da base de dados foi feita tanto por meio de tarefas manuais, assim como por meio de ferramentas como o Microsoft Access. A integração determinística pelo número da DN, enquanto que a integração não-determinística fez uso de regras e um algoritmo de busca fonética em português, desenvolvido pelos técnicos da secretaria municipal de saúde da cidade de São Paulo (SMS-SP), inspirado no Soundex
DOI: 10.5281/zenodo.6394912
title: Elements of Style in Reproducible Workflow Creation and Analysis: An INCLUDE Training Event

description: Elements of Style Workflow Creation and Maintenance: An INCLUDE Training Event The INCLUDE Data Hub is a new resource that securely hosts human clinical, genomic, transcriptomic, proteomic, and other data providing a wealth of opportunities to study conditions that affect individuals with Down syndrome. Today, the approach to answering new scientific questions with these data often uses cloud-based methods accessible through web browsers. During a three-hour virtual training, users learn the know-how to ask scientific questions with these data using cloud platforms and workflows. Users will learn how to build and share processes that assure reproducibility, repurposablility regardless of the computational environment. While many things are possible, the user will be oriented to approaching their work in a modular, testable fashion.
DOI: 10.5281/zenodo.6394911
title: Elements of Style in Reproducible Workflow Creation and Analysis: An INCLUDE Training Event

description: Elements of Style Workflow Creation and Maintenance: An INCLUDE Training Event The INCLUDE Data Hub is a new resource that securely hosts human clinical, genomic, transcriptomic, proteomic, and other data providing a wealth of opportunities to study conditions that affect individuals with Down syndrome. Today, the approach to answering new scientific questions with these data often uses cloud-based methods accessible through web browsers. During a three-hour virtual training, users learn the know-how to ask scientific questions with these data using cloud platforms and workflows. Users will learn how to build and share processes that assure reproducibility, repurposablility regardless of the computational environment. While many things are possible, the user will be oriented to approaching their work in a modular, testable fashion.
DOI: 10.6084/m9.figshare.19449974
title: Footprint_2008

description: Cálculo da pegada de energia e carbono das famílias brasileiras para o ano de 2008.
DOI: 10.6084/m9.figshare.19449974.v1
title: Footprint_2008

description: Cálculo da pegada de energia e carbono das famílias brasileiras para o ano de 2008.
DOI: 10.6084/m9.figshare.19449992
title: Footprint_2018

description: Cálculo da pegada de energia e carbono das famílias brasileiras para o ano de 2018.
DOI: 10.6084/m9.figshare.19449992.v1
title: Footprint_2018

description: Cálculo da pegada de energia e carbono das famílias brasileiras para o ano de 2018.
DOI: 10.6084/m9.figshare.19450003
title: Hidden in the litter: cryptic diversity of the leaf-litter toad <i>Rhinella castaneotica</i>–<i>proboscidea</i> complex revealed through integrative taxonomy, with description of a new species from south-western Amazonia

description: Recent studies have showed that several species of frogs previously thought to be widespread throughout Amazonia are species complexes with each individual species displaying smaller geographic ranges and that only a small fraction of Amazonian frogs are indeed widely distributed. Evaluating cryptic diversity within these complexes and describing associated candidate species are crucial for biological conservation, especially in regions where tropical forest is rapidly vanishing such as in southern Amazonia. In this study, we integrate mitochondrial (16S rRNA), morphological, bioacoustic and breeding behaviour data to investigate whether populations of the leaf-litter toad <i>Rhinella castaneotica</i>–<i>proboscidea</i> complex are conspecific as suggested by former studies. Our molecular analysis recovered five main clades in this complex whose geographic distributions are likely limited by geographic barriers. Morphological, bioacoustic and breeding behaviour data support the heterospecificity of three of them. The names <i>R. proboscidea</i> sensu stricto and <i>R. castaneotica</i> sensu stricto are applied to the populations from central and eastern Amazonia, respectively. The population from south-western Amazonia is described herein as a new species. It differs from other members of the <i>R. margaritifera</i> species group by its snout–vent length (35.7–45.2 mm in males and 38.3–52.1 mm in females), poorly developed supratympanic crests, dorsal skin smooth in males and granular in females, and advertisement call with average call duration of 285 ± 28 ms, 11 ± 1 notes, last note duration of 41 ± 10 ms and dominant frequency of 1,810 ± 220 Hz. Moreover, males of the new species vocalize while aggregated in temporary ponds unconnected to streams and do not exhibit necrophilic behaviour. South-western Amazonia is one of the Amazonian regions most threatened by forest loss and the formal description of new species adds impetus to support conservation strategies. http://zoobank.org/urn:lsid:zoobank.org:act:8F14DC28-DD0C-498C-B27D-113264EBE7CE2F0A
DOI: 10.6084/m9.figshare.19450003.v1
title: Hidden in the litter: cryptic diversity of the leaf-litter toad <i>Rhinella castaneotica</i>–<i>proboscidea</i> complex revealed through integrative taxonomy, with description of a new species from south-western Amazonia

description: Recent studies have showed that several species of frogs previously thought to be widespread throughout Amazonia are species complexes with each individual species displaying smaller geographic ranges and that only a small fraction of Amazonian frogs are indeed widely distributed. Evaluating cryptic diversity within these complexes and describing associated candidate species are crucial for biological conservation, especially in regions where tropical forest is rapidly vanishing such as in southern Amazonia. In this study, we integrate mitochondrial (16S rRNA), morphological, bioacoustic and breeding behaviour data to investigate whether populations of the leaf-litter toad <i>Rhinella castaneotica</i>–<i>proboscidea</i> complex are conspecific as suggested by former studies. Our molecular analysis recovered five main clades in this complex whose geographic distributions are likely limited by geographic barriers. Morphological, bioacoustic and breeding behaviour data support the heterospecificity of three of them. The names <i>R. proboscidea</i> sensu stricto and <i>R. castaneotica</i> sensu stricto are applied to the populations from central and eastern Amazonia, respectively. The population from south-western Amazonia is described herein as a new species. It differs from other members of the <i>R. margaritifera</i> species group by its snout–vent length (35.7–45.2 mm in males and 38.3–52.1 mm in females), poorly developed supratympanic crests, dorsal skin smooth in males and granular in females, and advertisement call with average call duration of 285 ± 28 ms, 11 ± 1 notes, last note duration of 41 ± 10 ms and dominant frequency of 1,810 ± 220 Hz. Moreover, males of the new species vocalize while aggregated in temporary ponds unconnected to streams and do not exhibit necrophilic behaviour. South-western Amazonia is one of the Amazonian regions most threatened by forest loss and the formal description of new species adds impetus to support conservation strategies. http://zoobank.org/urn:lsid:zoobank.org:act:8F14DC28-DD0C-498C-B27D-113264EBE7CE2F0A
DOI: 10.25345/c55t3g370
title: MassIVE MSV000089149 - Quantitative proteomics study of Sideroxydans lithotrophicus grown on solid and aqueous Fe (II)
title: The cells were grown on Fe(II)-citrate as the aqueous Fe(II) source and Fe(II)-smectite as the solid Fe(II) source. Cells were collected on a 0.2 um filter membrane (Millipore GPWP) by filtration. Then cells on the membrane were lysed by vortex in the lysis buffer containing 100 mM Tris/HCl, 10 mM Ethylenediaminetetraacetic acid (EDTA), pH 8.0, 0.05% Tween-20 and 1% w/v sodium dodecylsulfate (SDS). The proteins were digested with trypsin using in-house packed glass fiber filters following the suspension trapping (STrap) protocol, and desalted using C18-based StageTips. The LC-MS/MS analysis was performed using an Orbitrap Eclipse MS (Thermo Scientific) coupled with an Ultimate 3000 nanoLC system and a FAIMS Pro Interface (Thermo Scientific). Peptides were first loaded onto a trap column (PepMap C18; 2 cm x 100 um I.D.) and then separated by an analytical column (PepMap C18, 3.0 um; 10 cm x 75 um I.D.; Thermo Scientific) at 300 nl/min flow rate using a binary buffer system (buffer A, 0.1% formic acid in water; buffer B, 0.1% formic acid in acetonitrile) with a 165-min gradient (1% to 10% in 8 min; then to 25% buffer B over 117 min; 25% to 32% buffer B in 10 min, then to 95% buffer B over 3 min; back to 1% B in 5 min, and stay equilibration at 1% B for 20 min). Multiple CVs (-50, -65 and -80) were applied for FAIMS separation. For all experiments, the survey scans (MS1) were acquired over a mass range of 375-1500 m/z at a resolution of 60,000 in the Orbitrap. The maximum injection time was set to Auto, and AGC target was set to Standard. Monoisotopic peak selection was set to Peptides, and the charge state filter was set to 2-7. For MS/MS acquisition, precursors were isolated with a width of 1.6 m/z, fragmented with HCD using 30% collision energy with a maximum injection time of 100 ms, and collected in Orbitrap at 15,000 resolution. The dynamic exclusion was set to 60 s, and can be shared across different FAIMS experiments. Protein identification and quantitation were performed using the MaxQuant-Andromeda software suite (version 1.6.3.4) with most of the default parameters. An UniProt database (Sideroxydans lithotrophicus ES-1; Taxonomy ID, 580332; 2,978 sequences) was used for the protein identification. Other parameters include: trypsin as an enzyme with maximally two missed cleavage sites; protein N-terminal acetylation and methionine oxidation as variable modifications; cysteine carbamidomethylation as a fixed modification; peptide length must be at least 7 amino acids. False discovery rate was set at 1% for both proteins and peptides. Perseus (version 1.6.7.8) was used for downstream bioinformatics analysis such as clustering, correlation, t-test and ANOVA.
DOI: 10.25345/c5222r94n
title: MassIVE MSV000089150 - Comparative proteomics study of Sideroxydans lithotrophicus grown in different conditions
title: The cells were grown on Fe(II)-citrate, biogenic magnetite, commercial magnetite and thiosulfate until the late-log phase. Cells were collected on a 0.2 um filter membrane (Millipore GPWP) by filtration. Then cells on the membrane were lysed by vortex in the lysis buffer containing 100 mM Tris/HCl, 10 mM Ethylenediaminetetraacetic acid (EDTA), pH 8.0, 0.05% Tween-20 and 1% w/v sodium dodecylsulfate (SDS). The proteins were digested with trypsin using in-house packed glass fiber filters following the suspension trapping (STrap) protocol, and desalted using C18-based StageTips. The LC-MS/MS analysis was performed using an Orbitrap Eclipse MS (Thermo Scientific) coupled with an Ultimate 3000 nanoLC system and a FAIMS Pro Interface (Thermo Scientific). Peptides were first loaded onto a trap column (PepMap C18; 2 cm x 100 um I.D.) and then separated by an analytical column (PepMap C18, 3.0 um; 10 cm x 75 um I.D.; Thermo Scientific) at 300 nl/min flow rate using a binary buffer system (buffer A, 0.1% formic acid in water; buffer B, 0.1% formic acid in acetonitrile) with a 165-min gradient (1% to 10% in 8 min; then to 25% buffer B over 117 min; 25% to 32% buffer B in 10 min, then to 95% buffer B over 3 min; back to 1% B in 5 min, and stay equilibration at 1% B for 20 min). Multiple CVs (-50, -65 and -80) were applied for FAIMS separation. For all experiments, the survey scans (MS1) were acquired over a mass range of 375-1500 m/z at a resolution of 60,000 in the Orbitrap. The maximum injection time was set to Auto, and AGC target was set to Standard. Monoisotopic peak selection was set to Peptides, and the charge state filter was set to 2-7. For MS/MS acquisition, precursors were isolated with a width of 1.6 m/z, fragmented with HCD using 30% collision energy with a maximum injection time of 100 ms, and collected in Orbitrap at 15,000 resolution. The dynamic exclusion was set to 60 s, and can be shared across different FAIMS experiments. Protein identification and quantitation were performed using the MaxQuant-Andromeda software suite (version 1.6.3.4) with most of the default parameters. An UniProt database (Sideroxydans lithotrophicus ES-1; Taxonomy ID, 580332; 2,978 sequences) was used for the protein identification. Other parameters include: trypsin as an enzyme with maximally two missed cleavage sites; protein N-terminal acetylation and methionine oxidation as variable modifications; cysteine carbamidomethylation as a fixed modification; peptide length must be at least 7 amino acids. False discovery rate was set at 1% for both proteins and peptides. Perseus (version 1.6.7.8) was used for downstream bioinformatics analysis such as clustering, correlation, t-test and ANOVA.