cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26166892.v1
title: Data from Stryker et al (2024) "Tank formation transforms nitrogen metabolism of an epiphytic bromeliad and its phyllosphere bacteria."

description: Data from Stryker et al (2024) "Tank formation transforms nitrogen metabolism of an epiphytic bromeliad and its phyllosphere bacteria."For analyses refer to code from Stryker et al (2024) "Tank formation transforms nitrogen metabolism of an epiphytic bromeliad and its phyllosphere bacteria."
DOI: 10.17632/fp4k9tw39m
title: Pruritus Quality Research Letter Supplemental 

description: The American Academy of Dermatology's Performance Measurement Committee develops dermatology specific measures. The four paired measures described in the research letter include process and outcome pruritus measures for dermatitis and process and outcome pruritus measures for psoriasis. The process measures calculate rates of patient-reported outcome tool administration among patients. The outcome measures determines whether those with more severe pruritus (itch) are improving. The four measures completed measure testing.
DOI: 10.3535/glh-adz-4la
title: mudstone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y1a-d8b-h5t
title: Illaenina

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24851748.v1
title: EEG data MiEEG data Mirror Visual Feedback with electrical painful and non-painful stimulationsrror Visual Feedback with electrical painful and non-painful stimulations

description: Experimental procedure:The participants were comfortably seated on a chair with their arms lying symmetrically ahead on a table. Auditory cues of 70 dB, 1000 Hz, and 50 ms of duration (Kida et al., 2006) were used to trigger right index finger movements. All the subjects underwent three different conditions (80 trials each) in randomized order. Each condition lasted approx. 13 min with 10 min breaks between the conditions. The whole session – including EEG net preparation, training, pain threshold measurement, and experiment – lasted approx. 2.5 hours. In the experimental condition (Unilateral with Mirror, or UM+), the mirror was placed on the desk, perpendicularly to the subjects’ midsagittal plane with the reflecting face on the right side (Figure 1). Subjects were instructed to move the right index finger in response to the auditory cue while watching the image of the reflected moving hand in the mirror to give the illusion of the simultaneous left index finger movement. The position of the left hand behind the mirror corresponded to the image of the left hand reflected in the mirror. In the control conditions, the mirror was removed from the experimental setting and the left hand was directly visible to the participants. In one control condition (Unilateral without Mirror, UM-), subjects were asked to perform the same unilateral right index finger movements. In the other control condition (Bilateral without Mirror, BM-), subjects had to perform synchronous movements of both index fingers. The movements consisted of a double extension of the index finger with a slow release toward the bottom (approx. 1 s). All the participants received a brief training to perform the movement correctly and keep the left hand as still as possible during the unilateral conditions. In each condition, an electrical stimulus was delivered on the tip of the left index finger 100 ms after the auditory cue to induce cortical sensory-motor interaction (Figure 2). The interval between the stimuli was fixed at 10 s, a sufficient period to reset the desynchronization of the alpha rhythms (Babiloni et al., 2008). A fixed interval also allowed to produce a sort of predictability of the upcoming auditory and electrical stimuli, optimal to study the anticipatory alpha ERD/ERS responses. However, subjects were not informed of this fixed interval to avoid any counting strategies.<br>EEG data are uploaded in .hdf5 extension (g.recorder amplifier) to be analyzed with EEGLAB toolbox for MATLAB.Raw data coding slightly differs from the one presented in the original manuscript:no-M+P = UM-no-M+P-bil = BM-yes-M+P = UM+
DOI: 10.6084/m9.figshare.5727051.v1
title: Data from: Fundamental contradictions among observational and experimental estimates of non-trophic species interactions

description: Data to accompany Barner et al. 2018 Ecology<br><br>Please cite: Barner, AK, K Coblentz, SD Hacker, BA Menge. 2018. Fundamental contradictions among observational and experimental estimates of non-trophic species interactions. Ecology 99: 557-566.<br><br><b>Abstract</b><br>The difficulty of experimentally quantifying non-trophic species interactions has long troubled ecologists. Increasingly, a new application of the classic “checkerboard distribution” approach is used to infer interactions by examining the pairwise frequency at which species are found to spatially co-occur. However, the link between spatial associations, as estimated from observational co-occurrence, and species interactions, has not been tested. Here we used nine common statistical methods to estimate associations from surveys of rocky intertidal communities in the Northeast Pacific Ocean. We compared those inferred associations with a new dataset of experimentally-determined net and direct species interactions. Although association methods generated networks with aggregate structure similar to previously published interaction networks, each method detected a different set of species associations from the same dataset. Moreover, although association methods generally performed better than a random model, associations rarely matched empirical net or direct species interactions, with high rates of false positives and true positives, and many false negatives. Our findings cast doubt on studies that equate species co-occurrences to species interactions, and highlight a persistent, unanswered question: how do we interpret spatial patterns in communities? We suggest future research directions to unify the observational and experimental study of species interactions, and discuss the need for community standards and best practices in association analysis.<br><br><b>Files</b><br><b>environmental_variables.csv</b> - All the abiotic variables associated with surveys conducted at the 25 x 25 cm<sup>2</sup> spatial grain size (see Appendix S2: Table S1).<br><b>experimental_interactions.csv </b>- Data from the literature on species interactions among rocky intertidal taxa encountered in the community survey.<br><b>taxon_names_key.csv </b>- Key to translate among the species names found in the literature survey, the species names used in the community survey, and the numeric codes assigned for analysis.<br><b>community_survey_<i>num</i>x<i>num</i></b> - Community survey data at the 5 spatial grain sizes: 5x5, 10x10, 15x15, 20x20, and 25x25 cm<sup>2</sup>. Unknown and rare taxa are included in these data, but were removed for analysis (see Appendix S2). Taxon names are the ones recorded during the survey and are purely descriptive; the formal taxon names for these columns can be found in <i>taxon_names_key.csv</i>. <br><br>
DOI: 10.6084/m9.figshare.7970057.v2
title: Annotation file of BBG_CVASU_1.0

description: Annotation File
DOI: 10.3535/2yz-za4-zg3
title: Illaenina

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fc8-jjl-kpk
title: Illaenina

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13712911.v1
title: RH bouts dataset

description: Dataset used to analyse the behavioural response to RH production
DOI: 10.3535/3r2-0l1-lh8
title: †Proetida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8ex-f7c-2dc
title: Illaenina

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cc6-nxa-vsm
title: lime-mudstone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/09r-gnq-4jj
title: lime-mudstone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/phe-zrf-abh
title: Illaenina

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w05-vha-3y9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/48m-0p6-tgr
title: lime-mudstone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/k8r-9k6-nyv
title: lime-mudstone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m7n-2lc-fjf
title: Palaeophycus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kq9-b94-lcz
title: lime-mudstone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.14749/27646626
title: National Research and Experimental Development Survey (R&D) 2019-20: All provinces in South Africa - Aggregated

description: <p> This data set contains data on the R&D expenditure by province, type of R&D, research fields, socioeconomic objectives, sources of funds and province. R&D personnel data is also included. The data is recorded for each of the following economic sectors of the South African economy: Business, Government, Higher Education, Not-for-Profit Organisations and Science Councils.</p>
DOI: 10.15131/shef.data.12292787.v1
title: Data for the paper: "PTH(1-34) treatment and/or mechanical loading have different osteogenic effects on the trabecular and cortical bone in the ovariectomized C57BL/6 mouse"

description: Link to the data used in:<br>Roberts, Arredondo Carrera, Zanjani-pour, Boudiff, Wang, Gartland and Dall’Ara<br><br>PTH(1-34) treatment and/or mechanical loading have different osteogenic effects on the trabecular and cortical bone in the ovariectomized C57BL/6 mouse<br><br>Scientific Reports 10, 8889 (2020).<br>All the procedures were performed under a British Home Office licence (PF61050A3) and in compliance with the Animal (Scientific Procedures) Act 1986.<br>The images and data are too large to be uploaded in ORDA. The whole dataset can be assessed at: https://web-unidrive.sheffield.ac.uk/shared/multisim2/WP7/PTH_Loading/. Please contact the senior author at: e.dallara@sheffield.ac.uk or the Project Management Office at: pmo@insigneo.org if you are interested in working on the files.<br>In this repository we have uploaded only the result file obtained from assessment of the microCT images.
DOI: 10.3535/phw-ml9-ljs
title: Cornulites

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r7n-012-j1t
title: Acernaspis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/7p494d5xhh
title: Assessing the Impacts of Ghana’s Oil and Gas Industry on Ecosystem Services and Smallholder Livelihoods

description: This study combined multiple theoretical perspectives in an attempt to understand complex interlinkages that underlie the almost inevitable negative outcomes associated with natural resources exploitation in developing countries like Ghana. The project further sought to evaluate the possible decline in critical local ecosystems and its impacts on the livelihoods that are dependent on them, in ways that are perceptible and not so easily perceptible. Finally, the study sought to understand how any such decline in ecosystem services and livelihoods may result in negative social and cultural outcomes. The study employed primary and secondary data which were analyzed both qualitatively and quantitatively to assess the magnitude of these adverse impacts. The study used Remote Sensing (RS) and Geographical Information System techniques to assess land use change in the areas of the oil and gas exploitation. Surveys and interviews were conducted for local farmers and fisher folks to understand how exploitation activities impact on their livelihoods. Data obtained from the study were quantitatively and qualitatively analyzed. The oil industry has without doubt contributed to the status of Ghana being one of the fastest growing economies in the world, and has provided employment opportunities for many around the country. However, for local livelihood dependents, the consequences of the oil industry seem to be very different. The results show that the oil industry has adversely affected livelihoods of both farmers and fisher folks, alike, without alternative livelihoods. About 23 km2 of agricultural land has been converted to urban purposes since 2001 in the Sekondi-Takoradi Metropolis, with nearly half has occurring between 2009 and 2016. This is against a general increase in agricultural land area through the entire country. The oil industry-accelerated agricultural land losses have directly affected about 25% of the total surveyed farmers, deepening local poverty and food insecurity. Similarly, the livelihoods of fisher folks have generally declined due to primarily due to the implementation of exclusion zones that limit access of fishermen to fertile fishing grounds. The study also revealed that loss of livelihoods and the complex migration dynamics, accelerated by the oil industry, have led to deterioration the sociocultural wellbeing. The oil industry has driven an increase in cost of living and high levels of local unemployment, which has imposed on local communities, consequences such as increased rates of vices, school dropouts, and teenage pregnancies, as well as number of conflicts. For Ghana to reap maximum returns from the relatively new oil and gas industry, it is essential to take a cue from other countries that have had to grapple with severe environmental issues relating to oil and gas exploration in order to forestall potential conflicts.
DOI: 10.3535/nef-dxe-tmp
title: Acernaspis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qj8-yqe-atl
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1284022.v43
title: A "developmental hourglass" in fungi

description: #PdTT Version 1.0 (January 2015)<br>#This program develops algorithms for Phylostratigraphy, dN/dS ratio, Transcriptome age index (TAI) and Transcriptome divergence index (TDI) analysis. #Please cite:<br>#Cheng X, Hui JHL, Lee YY, Law PTW, Kwan HS. 2015. A "developmental hourglass" in fungi. <em>Mol Biol Evol.</em> 32(6):1556-66. doi: 10.1093/molbev/msv047 Please read carefully the following before running the programs:<br>README_TAI.txt for phylostratigraphy analysis and transcriptome age index (TAI) calculation, and<br>README_TDI.txt for dN/dS ratio analysis and transcriptome divergence index (TDI) calculation. The algorithms are implemented in Perl. Please make sure that Perl (https://www.perl.org/) is properly installed on your computer. All source codes are included in this fileset. You can modify some of the codes to suit the purpose of your study.
DOI: 10.17632/pwsc2jgwzk
title: Molecular projection area and surface density of adsorbed molecules

description: The constants and parameters necessary for modeling and analysis of adsorption-desorption process are related to molecular structure of adsorbate molecules. The data archived here may be used for rough estimates in calculations of mono-layer multicomponent gas adsorption on solids.
DOI: 10.3535/c7x-60n-jm9
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r5e-qkh-3aj
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fnv-ezk-504
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/srs-5y3-1v8
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24913146.v2
title: <b><i>ACTN3</i></b><b>, </b><b><i>ACE</i></b><b>, </b><b><i>BDKRB2</i></b><b>, and </b><b><i>AGT and Brazilian swimmers</i></b>

description: The influence of genetic polymorphisms on athletic performance has been widely explored. This study investigated the interactions between the polymorphisms <i>ACTN3 </i>(R577X), <i>ACE </i>(I/D), <i>BDKRB2 </i>(-9/+9), and <i>AGT </i>(M/T) and their association with endurance and strength phenotypes in Brazilian swimmers. 123 athletes (aged 20–30 years) and 718 controls participated in the study. The athletes were divided into elite and sub-elite (N=19 and 104, respectively) and strength and endurance experts (N=98 and 25, respectively). Hardy-Weinberg equilibrium was observed in all groups. Considering the <i>ACE</i> polymorphism, it was observed a higher frequency of the DD genotype than expected in the strength experts of the elite group, whereas the strength experts sub-elite athletes had a higher frequency of the ID genotype (χ<sup>2</sup>=8.17; p=0.01). Subjects with XX genotypes of <i>ACTN3</i> are more likely to belong to the athlete group when compared to the control group (OR=1.79, p=0.04). The DD homozygotes of the <i>ACE</i> are more likely to belong to the elite group with strength phenotypes than the group of sub-elite (OR=7.96, p=0.01) and elite strength experts compared to elite endurance (OR=18.0, p=0.03). However, no significant differences were observed in the allelic distribution of the polymorphisms evaluated when comparing Elite, sub-elite athletes and controls. In conclusion, <i>ACE</i> and <i>ACTN3</i> allele frequencies should be considered with regard to performance influencing factors in Brazilian swimmers.
DOI: 10.17632/yh7f8xgd7k
title: Laten — A complete lattice energy program

description: Title of program: LATEN Catalogue Id: ACMU_v1_0 Nature of problem To calculate the lattice energy of an ionic salt (containing complex ions) by the most recently developed theory; using as data crystal structure data and minimising the energy with respect to the experimental unit cell constants. Versions of this program held in the CPC repository in Mendeley Data ACMU_v1_0; LATEN; 10.1016/0010-4655(80)90044-2 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.3535/ntw-w7a-3vg
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zym-hy5-bxt
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1197222.v3
title: (Re)Inventing the Future: From climate change to UAVs to NExtGen plant breeding

description: Talk given for first year Visual Arts students at the Australian National University
DOI: 10.3535/3dw-r33-jza
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qrp-maw-c0q
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16837996.v1
title: September 2021 Covid-19 + Vaccines Twitter Streaming Dataset

description: The file contains Tweet IDs* for COVID-19 related tweets containing at least one vaccine-related word (i.e., words that starts with vaccin*, vacin*, or vax*) collected in September, 2021 from Twitter's COVID-19 Streaming Endpoint via a custom script developed by the Social Media Lab (https://socialmedialab.ca/). Visit our interactive dashboard at https://stream.covid19misinfo.org/ for a preview and some general stats about this COVID-19 Twitter streaming dataset. For more info about Twitter's COVID-19 Streaming Endpoint, visit https://developer.twitter.com/en/docs/labs/covid19-stream/overview * Note: In accordance with Twitter API Terms, the dataset only includes Tweet IDs (as opposed to the actual tweets and associated metadata). To recollect tweets contained in this dataset, you can use programs such Communalytic (https://communalytic.com/), Hydrator (https://github.com/DocNow/hydrator/) or the Python library Twarc (https://github.com/DocNow/twarc/).
DOI: 10.6084/m9.figshare.28658597.v1
title: 4-Furanylvinylquinoline derivative as a new scaffold for the design of oxidative stress initiator and glucose transporter inhibitor drugs

description: This dataset contains measurements performed during the development of an article "4-Furanylvinylquinoline derivative as a new scaffold for the design of oxidative stress initiator and glucose transporter inhibitor drugs". Attached data include results of measurements for: cell viability in 2D and 3D models, cell cycle assay, Annexin V staining (apoptosis detection), DNA intercalation, qRT-PCR analysis (gene expression data), and intracellular reactive oxygen species (ROS) levels.
DOI: 10.3535/749-tl9-qx7
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jrd-xyd-jsr
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19294640.v1
title: EFR_sequences_aa.fa

description: Amino acid sequences of EFR homologs
DOI: 10.3535/dp6-5l7-ryv
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xt3-c02-f2j
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19445636.v1
title: Additional file 4 of Use of novel lab assays to examine the effect of pyrethroid-treated bed nets on blood-feeding success and longevity of highly insecticide-resistant Anopheles gambiae s.l. mosquitoes

description: Additional file 4: Table C. Scripts of the statistical analysis in Rstudio.
DOI: 10.3535/6x9-2xz-dde
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/e3a-clc-8eg
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21354039.v3
title: Derivation of eHealth monitoring and evaluation reference model domains and subdomains

description: Findings of the exploratory field study<sup>22</sup> on indicators supposed to be assessed during the eHealth evaluation were corroborated with the suggestions from other eHealth evaluation frameworks in literature<sup>13,16–19</sup> to derive substantial and fundamental all-encompassing eHealth monitoring and evaluation domains and sub-domains that are supposed to be assessed.
DOI: 10.3535/ykb-rtn-slj
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ytc-gmv-v0s
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3839805.v1
title: The optical density measurements of S. aureus cultures in LB medium with the addition of serum or filtrated serum.

description: 96 well plate cultures of <i>S. aureus </i>in different media (either LB medium pH = 7, LB medium pH= 5, LB medium with 7% serum, or LB medium with 7% filtrated serum).
DOI: 10.3535/0rs-5c4-ejs
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dhr-4jx-gbk
title: Coccosteus markae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.