cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10992719
title: High-resolution neutron spectroscopy of La1.855Sr0.145CuO4

description: Data from a high-resolution neutron spectroscopy investigation of the low-energy incommensurate spin excitations in the high-temperature superconductor La1.855Sr0.145CuO4. The study was conducted using the IN5 time-of-flight neutron spectrometer at the Institut Laue-Langevin. The sample consisted of two crystals with a combined mass of 3.5 g and a superconducting transition temperature of 36 K. These crystals were prepared from a single rod grown via the traveling-solvent floating-zone method and aligned within a deviation of less than a degree. The lattice parameters are a = b = 3.81 Å and c = 13.2 Å, in the notation of the high-temperature tetragonal unit cell. Measurements were performed on the sample in a standard cryostat.  Magnetic excitation spectra were acquired with a fixed sample orientation (b-axis perpendicular to the horizontal scattering plane) over 12 or 24 hours at various temperatures. Two distinct experimental configurations were utilized, employing incident wavelengths λ_i = 3.3 Å and 5 Å. The shorter wavelength was used to validate the magnitude of the superconducting spin gap (4 meV) at a base temperature of T = 2 K. The λ = 5 Å setup was employed to gather spectra at temperatures of T = 40, 30, 25, and 20 K, with an elastic full-width at half maximum resolution of ΔE = 80 μeV.
DOI: 10.5281/zenodo.10992720
title: High-resolution neutron spectroscopy of La1.855Sr0.145CuO4

description: Data from a high-resolution neutron spectroscopy investigation of the low-energy incommensurate spin excitations in the high-temperature superconductor La1.855Sr0.145CuO4. The study was conducted using the IN5 time-of-flight neutron spectrometer at the Institut Laue-Langevin. The sample consisted of two crystals with a combined mass of 3.5 g and a superconducting transition temperature of 36 K. These crystals were prepared from a single rod grown via the traveling-solvent floating-zone method and aligned within a deviation of less than a degree. The lattice parameters are a = b = 3.81 Å and c = 13.2 Å, in the notation of the high-temperature tetragonal unit cell. Measurements were performed on the sample in a standard cryostat.  Magnetic excitation spectra were acquired with a fixed sample orientation (b-axis perpendicular to the horizontal scattering plane) over 12 or 24 hours at various temperatures. Two distinct experimental configurations were utilized, employing incident wavelengths λ_i = 3.3 Å and 5 Å. The shorter wavelength was used to validate the magnitude of the superconducting spin gap (4 meV) at a base temperature of T = 2 K. The λ = 5 Å setup was employed to gather spectra at temperatures of T = 40, 30, 25, and 20 K, with an elastic full-width at half maximum resolution of ΔE = 80 μeV.
DOI: 10.25387/g3.28804310
title: Supplemental Material for Pook, Tost, and Simianer, 2025

description: Figure S1 provides a schematic overview of the rapid cycle breeding scheme with blue boxes indicating cohorts of lines with numbers indicating the number of lines included in a particular cohort. This visualization was generated via the MoBPS interactive environment from Pook et al. (2020),
Figure S2 with additional phenotyping of F2 lines, Figure S3 with additional phenotyping of DH lines and
Figure S4 with newly introduced additional genetic material.
Figure S5 provides information on the accuracy of the breeding value estimation for the F2 lines in the different breeding cycles for each of the three traits in the baseline scenario. 
Figure S6 provides an overview of prediction accuracies per trait and breeding cycle for the different scenarios.
Figure S7 provides a comparison of the remaining genetic diversity for the different base scenarios depending on the amount of genetic material from outside of the breeding program introduced in each cycle.
Figure S8 provides a comparison of the remaining genetic diversity for the base scenarios depending on the angle used in AlphaMate (Gorjanc and Hickey, 2018) in each cycle.
Table S1 provides information on the share of heterozygous variants for all scenarios and cycles. 
Table S2 provides information on the share of fixed markers for all scenarios and breeding cycles.
DOI: 10.5281/zenodo.15299992
title: Comprehensive mapping of genome structure with ultra-high-resolution 3D genomics and deep learning

description: 3D contact map predictions by Cleopatra, a new deep learning model that predicts high-resolution 3D genome structure. All predictions are in .cool format at binned at 500bp (for interactions up to 500kb) and at 2kb (for interactions up to 2Mb) respectively. Multi resolution files can be generated using cooler zoomify.
DOI: 10.5281/zenodo.15299993
title: Comprehensive mapping of genome structure with ultra-high-resolution 3D genomics and deep learning

description: 3D contact map predictions by Cleopatra, a new deep learning model that predicts high-resolution 3D genome structure. All predictions are in .cool format at binned at 500bp (for interactions up to 500kb) and at 2kb (for interactions up to 2Mb) respectively. Multi resolution files can be generated using cooler zoomify.
DOI: 10.15468/dl.4ygwhb
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Plethodon kisatchie Highton, 1989)"
 ]
}

 The dataset includes 77 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009864-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/ca2ea195-a760-4229-8e6c-8cfbf58b4510
title: Data underlying the publication: Turbulent Exchange of CO2 in the Lower Tropical Troposphere Across Clear-to-Cloudy Conditions

description: In this repository we present the code and/or necessary data to reproduce the results of the study: "Turbulent Exchange of CO2 in the Lower Tropical Troposphere Across Clear-to-Cloudy Conditions". Additional data on the campaign can be requested via https://www.cloudroots.wur.nl. A dedicated data paper with the required data is currently being developed and can be accessed at a later stage through this website.
DOI: 10.4121/ca2ea195-a760-4229-8e6c-8cfbf58b4510.v1
title: Data underlying the publication: Turbulent Exchange of CO2 in the Lower Tropical Troposphere Across Clear-to-Cloudy Conditions

description: In this repository we present the code and/or necessary data to reproduce the results of the study: "Turbulent Exchange of CO2 in the Lower Tropical Troposphere Across Clear-to-Cloudy Conditions". Additional data on the campaign can be requested via https://www.cloudroots.wur.nl. A dedicated data paper with the required data is currently being developed and can be accessed at a later stage through this website.
DOI: 10.15468/dl.6xhbp7
title: Occurrence Download

description: A dataset containing 126254 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Desmognathus Baird, 1850)"
 ]
}

 The dataset includes 126254 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009855-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/87e82ddb-eadb-474e-813e-124e6802d67d
title: Code underlying the publication: Turbulent Exchange of CO2 in the Lower Tropical Troposphere Across Clear-to-Cloudy Conditions

description: In this repository we present the code and/or necessary data to reproduce the results of the study: "Turbulent Exchange of CO2 in the Lower Tropical Troposphere Across Clear-to-Cloudy Conditions". Additional data on the campaign can be requested via https://www.cloudroots.wur.nl. A dedicated data paper with the required data is currently being developed and can be accessed at a later stage through this website.
DOI: 10.4121/87e82ddb-eadb-474e-813e-124e6802d67d.v1
title: Code underlying the publication: Turbulent Exchange of CO2 in the Lower Tropical Troposphere Across Clear-to-Cloudy Conditions

description: In this repository we present the code and/or necessary data to reproduce the results of the study: "Turbulent Exchange of CO2 in the Lower Tropical Troposphere Across Clear-to-Cloudy Conditions". Additional data on the campaign can be requested via https://www.cloudroots.wur.nl. A dedicated data paper with the required data is currently being developed and can be accessed at a later stage through this website.
DOI: 10.15468/dl.gt5ebc
title: Occurrence Download

description: A dataset containing 150881 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is True",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "GadmGid is USA.7_1",
 "Year 1800-2025"
 ]
}

 The dataset includes 150881 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009858-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28912079
title: Figure

description: Clear cell renal cell carcinoma (ccRCC) exhibits paradoxical immune characteristics, with abundant CD8⁺ T cell infiltration failing to translate into favorable clinical outcomes. The mechanisms underlying this immune resistance remain poorly defined. Here, we identify TRIM28 as a central mediator of immune evasion in ccRCC through integrated computational screening and functional validation. Using a high-throughput gene knockout simulation based on Geneformer, we pinpointed TRIM28 as a key regulator of tumor-intrinsic immune suppression. TRIM28 depletion reprograms malignant epithelial cells toward a less aggressive state and enhances tumor cell susceptibility to CD8⁺ cytotoxic T lymphocyte (CTL)-mediated killing. Mechanistically, TRIM28 stabilizes PARP1 protein via SUMO2 conjugation, thereby reducing nuclear NAD⁺ availability and suppressing SIRT1 activity. This results in increased acetylation of NF-κB p65 and upregulation of PD-L1 expression. In parallel, TRIM28-driven NAD⁺ consumption in tumor cells limits NAD⁺ level for neighboring CD8⁺ T cells, impairing their metabolic fitness and effector function. Structure-based screening identifies erlotibop as a TRIM28 inhibitor, which synergizes with PD-1 blockade to extend survival. This dual mechanism integrates immunoregulatory and metabolic pathways, offering a comprehensive explanation for the “immune-inflamed but unresponsive” phenotype observed in ccRCC. Collectively, our findings position TRIM28 as a critical immunometabolic checkpoint and highlight its potential as a therapeutic target for overcoming immune resistance in ccRCC.
DOI: 10.15468/dl.5q4agt
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates fisheri (Stejneger, 1893))"
 ]
}

 The dataset includes 132 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009867-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rjrbwg
title: Occurrence Download

description: A dataset containing 303 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Plethodon larselli Burns, 1954)"
 ]
}

 The dataset includes 303 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009868-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qtyrnf
title: Occurrence Download

description: A dataset containing 680 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is University of Michigan Museum of Zoology, Division of Mammals",
 "TaxonKey is Artibeus jamaicensis Leach, 1821"
 ]
}

 The dataset includes 680 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009869-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6gsa93
title: Occurrence Download

description: A dataset containing 552 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Plethodon meridianus Highton & Peabody, 2000)"
 ]
}

 The dataset includes 552 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009871-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15304032
title: Fast trills in songs of a small passerine are not reliable signals of individual's age or predictors of mating success
DOI: 10.5281/zenodo.15318564
title: Fast trills in songs of a small passerine are not reliable signals of individual's age or predictors of mating success

description: Dataset related to the study "Fast trills in songs of a small passerine are not reliable signals of individual's age or predictors of mating success".
DOI: 10.15468/dl.779z4m
title: Occurrence Download

description: A dataset containing 473707 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation)",
 "Geometry POLYGON((1.27634 50.87354,2.82971 51.76441,2.64764 53.02579,-0.26854 52.98713,1.27634 50.87354))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (April, May, June)",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 2000-2015"
 ]
}

 The dataset includes 473707 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009812-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8gmmee
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Aquarana Dubois, 1992)"
 ]
}

 The dataset includes 47 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009870-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18120/pmtw-bz51
title: CursorClick
DOI: 10.15468/dl.xrj8tw
title: Occurrence Download

description: A dataset containing 3421 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates grylio (Stejneger, 1901))"
 ]
}

 The dataset includes 3421 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009873-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3bae39
title: Occurrence Download

description: A dataset containing 10487 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Plethodon metcalfi Brimley, 1912)"
 ]
}

 The dataset includes 10487 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009874-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.11583/dtu.27446925
title: Data for AMPERE-2 opentron

description: Start out with reading the "Readme.xlsx".This dataset supports the publication "Democratizing self-driving lab platform for electrodeposition of catalyst and electrochemical validation" in Digital Discovery. It presents data focusing on a robotic platform, an Opentrons OT-2, which was used for the automated electrodeposition of Oxygen Evolution Reaction (OER) catalysts. The metals used in the catalyst synthesis include chloride solutions of Nickel (Ni), Iron (Fe), Chromium (Cr), Manganese (Mn), Cobalt (Co), Zinc (Zn), and Copper (Cu).<br>The dataset comprehensively includes all data, scripts, and images related to the **electrochemical testing and SEM-EDS characterization** of the synthesized catalysts. Key contents are organized into folders containing electrochemical potentiostatic data (raw data and plots from Cyclic Voltammetry (CV), Chronopotentiometry (CP), and Electrochemical Impedance Spectroscopy (EIS)), Energy Dispersive X-ray Spectroscopy (EDS) data (combined SEM-EDS plots, individual element maps, and elemental spectra), and Scanning Electron Microscopy (SEM) images and metadata. **3D CAD files** necessary for reproducing the experimental setup are also included.<br>Each sample within the dataset includes a sequence of measurements encompassing the "electrodeposition phase"(indicated by negative numbers) and the "OER testing phase" (indicated by positive numbers). For analysis and drawing conclusions, focusing on the CP data at 20 mA/cm² and 50 mA/cm² is recommended, while data at 100 mA/cm² may be influenced by bubble artifacts, and data below 10 mA/cm² may show dominant surface oxidation effects. Data files contain columns for Timestamp, Voltage (V), Current (A), Temperature (C), and Corrected Voltage (V) for CV and CP, and detailed impedance parameters for EIS data.
DOI: 10.11583/dtu.27446925.v1
title: Data for AMPERE-2 opentron

description: Start out with reading the "Readme.xlsx".This dataset supports the publication "Democratizing self-driving lab platform for electrodeposition of catalyst and electrochemical validation" in Digital Discovery. It presents data focusing on a robotic platform, an Opentrons OT-2, which was used for the automated electrodeposition of Oxygen Evolution Reaction (OER) catalysts. The metals used in the catalyst synthesis include chloride solutions of Nickel (Ni), Iron (Fe), Chromium (Cr), Manganese (Mn), Cobalt (Co), Zinc (Zn), and Copper (Cu).<br>The dataset comprehensively includes all data, scripts, and images related to the **electrochemical testing and SEM-EDS characterization** of the synthesized catalysts. Key contents are organized into folders containing electrochemical potentiostatic data (raw data and plots from Cyclic Voltammetry (CV), Chronopotentiometry (CP), and Electrochemical Impedance Spectroscopy (EIS)), Energy Dispersive X-ray Spectroscopy (EDS) data (combined SEM-EDS plots, individual element maps, and elemental spectra), and Scanning Electron Microscopy (SEM) images and metadata. **3D CAD files** necessary for reproducing the experimental setup are also included.<br>Each sample within the dataset includes a sequence of measurements encompassing the "electrodeposition phase"(indicated by negative numbers) and the "OER testing phase" (indicated by positive numbers). For analysis and drawing conclusions, focusing on the CP data at 20 mA/cm² and 50 mA/cm² is recommended, while data at 100 mA/cm² may be influenced by bubble artifacts, and data below 10 mA/cm² may show dominant surface oxidation effects. Data files contain columns for Timestamp, Voltage (V), Current (A), Temperature (C), and Corrected Voltage (V) for CV and CP, and detailed impedance parameters for EIS data.
DOI: 10.15468/dl.gc5ge7
title: Occurrence Download

description: A dataset listing the 4313 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Malta",
 "OccurrenceStatus is Present",
 "Year 2000-2025"
 ]
}

 The dataset's 4313 records were derived from 168 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009866-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r8m3q6
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sapajus xanthosternos (Wied-Neuwied, 1826)",
 "Year 1970-2025"
 ]
}

 The dataset includes 27 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009876-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15318592
title: 注释的物种基因组信息以及注释的TAAR数目
DOI: 10.5281/zenodo.15318593
title: 注释的物种基因组信息以及注释的TAAR数目
DOI: 10.15468/dl.7sy2yd
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Aquarana Dubois, 1992)"
 ]
}

 The dataset includes 47 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009877-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gcj8q6
title: Occurrence Download

description: A dataset containing 2657 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Plethodon mississippi Highton, 1989)"
 ]
}

 The dataset includes 2657 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009878-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nc2wtn
title: Occurrence Download

description: A dataset containing 792 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Lithobates heckscheri (Wright, 1924))"
 ]
}

 The dataset includes 792 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009880-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dhxqcu
title: Occurrence Download

description: A dataset containing 126254 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Desmognathus Baird, 1850)"
 ]
}

 The dataset includes 126254 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009872-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hpgy2d
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is India",
 "GadmGid is IND.32_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 129 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009881-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17909/cb0x-rn85
title: PID 6797 Data

description: Collated for "A Report on the JWST/MIRI Search for Planets and Exozodiacal Emission Around α Centauri A"