cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15472/b69qea
title: Moluscos de las Colecciones Biológicas de la Universidad del Magdalena

description: El presente conjunto de datos contiene a los moluscos de las Colecciones Biológicas adscritas al Centro de Colecciones Científicas (CCC) de la Universidad del Magdalena. Este recurso cuenta con 266 registros de moluscos marinos, todos provenientes de diferentes sitios del Caribe colombiano esto incluye la zona costera y de mar abierto. Los especímenes están depositados bajo el acrónimo CBUMAG: MOL.
description: La colección fue documentada, digitalizada y publicada por primera vez durante la ejecución del proyecto BID-CA2020-055-NAC "Incremento de la accesibilidad de información marina de las Colecciones de Historia Natural de Colombia, mediante la movilización de datos, el fortalecimiento de la infraestructura y el entrenamiento". El presente conjunto de datos es el producto de dicho proceso realizado entre 2021-07-01 y 2023-06-30, como parte del entregable “Colección de biología marina del Centro de Colecciones Biológicas de la Universidad del Magdalena – CBUMAG” aportado por la UniMagdalena al proyecto.
description: This data set contains the molluscs from the Biological Collections attached to the Center for Scientific Collections (CCC) of the Universidad del Magdalena. This resource has 266 records of marine mollusks, all from different sites in the Colombian Caribbean, this includes the coastal zone and the open sea. The specimens are deposited under the acronym CBUMAG: MOL.
description: The collection was documented, digitized and published for the first time during the execution of the BID-CA2020-055-NAC project "Increasing the accessibility of marine information of the Natural History Collections of Colombia, through data mobilization, infrastructure strengthening and training". The present dataset is the product of that process carried out between 2021-07-01 and 2023-06-30, as part of the deliverable "Marine Biology Collection of the Biological Collections Center of the University of Magdalena - CBUMAG" contributed by UniMagdalena to the project.
DOI: 10.25607/sqypig
title: UNESCO eDNA expedition in The Wadden Sea (Denmark, Germany, The Netherlands): April 2023

description: This dataset contains the eDNA data collected as a part of the UNESCO eDNA expeditions in Marine World Heritage Sites project in 2022-2024. The project was coordinated in collaboration with the Ocean Biodiversity Information System (OBIS) of IOC-UNESCO and the marine programme of the UNESCO World Heritage Center, and funded by the government of Flanders (Kingdom of Belgium). The samples were collected with citizen science eDNA sampling kits, containing a syringe and a filter, and preserved with Longmire's buffer, before sequencing at a central laboratory. Five different biomarkers were analysed, including 12SMifish, Mimammal, Teleo, 16S-Vert and COI markers. The sequences were analysed with the PacMAN pipeline and quality controlled including a validation check by local scientists and site managers as well as compared to existing knowledge on species distributions in OBIS and GBIF. The full sampling protocols and materials are available on the project website (https://www.unesco.org/en/edna-training-materials?hub=66910), and the bioinformatics pipeline is on github (https://github.com/iobis/PacMAN-pipeline). The data can also be explored on the eDNA expeditions dashboard (https://dashboard.ednaexpeditions.org/).
DOI: 10.60545/xixnti
title: Evaluación submareal de los bajos “EL ACUARIO” y “RABO DEL VIEJO” de la Reserva Marina El Pelado, Provincia de Santa Elena - 2023

description: Los arrecifes coralinos se destacan como los ecosistemas marinos con la mayor biodiversidad del planeta, siendo fundamentales para el sector pesquero y el mantenimiento de la vida marina. En Santa Elena, Ecuador, la información referente a estos centros de alta abundancia y biodiversidad aún es limitada.
description: Este estudio tuvo como objetivo evaluar los bajos “El Acuario” y “Rabo del Viejo” de la Reserva Marina “El Pelado”, utilizando la guía de monitoreos Reef Check y el protocolo NaGISA. Se buscó correlacionar los datos de abundancia y diversidad de peces y equinodermos con los datos de la cobertura coralina hermatípica aplicando un análisis de componentes principales. Para llevar a cabo la toma de datos, se utilizaron transectos dispuestos perpendicularmente a la costa y foto-cuadrantes para establecer una línea base. Se realizaron tres muestreos por semana durante los meses de mayo y junio, además se tomaron parámetros físico-químicos.
description: Se registraron un total de 24.012 individuos representados por 4416 especímenes de peces, 19.596 de equinodermos y 3 especies de corales hermatípicos. Las familias Chaetodontidae, Scaridae y Labridae destacaron como los taxones más abundantes de peces, mientras que Diadema mexicanum fue predominante en equinodermos y Pocillopora sp. en corales hermatípicos. Los índices de Shannon – Wiener y de Simpson indicaron una tensión moderada en las comunidades evaluadas. Los parámetros físico-químicos no presentaron variaciones significativas y se mantuvieron dentro de los límites permitidos por la normativa ambiental ecuatoriana. El análisis de componentes principales reveló una correlación fuerte entre los grupos taxonómicos estudiados y la cobertura coralina hermatípica en ambos sitios de estudio. Se generaron fotomosaicos que representan gráficamente la cobertura de sustratos y corales hermatípicos, reflejando los datos obtenidos.
DOI: 10.14284/524
title: Survey dataset on Pomatoschistus minutus (Pallas, 1770) and other gobies at the Belgian Coast, Oosterschelde, Westerschelde and at nuclear plants near Doel & Borssele

description: This dataset was generated by the Laboratory of Aquatic Ecology (KULeuven) and contains data that was gathered during a survey on Pomatoschistus minutus at the Belgian Coast, Oosterschelde, Westerschelde and at nuclear plants near Doel & Borssele.
description: This dataset was generated by the Laboratory of Aquatic Ecology (KULeuven) and contains data that was gathered during a survey on Pomatoschistus minutus at the Belgian Coast, Oosterschelde, Westerschelde and at nuclear plants near Doel & Borssele. Sampling was done with the Zeeleeuw RV, Zeekat, fishing boats and by hand (in the surf zone). At the moment of the trawl temperature, salinity and depth were measured. During sampling with the Zeeleeuw RV also shipspeed, direction, air temperature, air pressure, air humidity, conductivity and chlorophyll a were registered. During sampling the other goby species were included in the samples and for the different species the densities were determined. For Pomatoschistus minutus sex, total length, standard length and wheight were determined. For P. microps and P. pictus, data is more qualitative then quantitative.
DOI: 10.14286/7p6y4j
title: Hering Tags

description: This is the OBIS extraction of the Ocean Tracking Network and Oregon Department of Fish and Wildlife (ODFW) Hering Tags, consisting of the release tagging metadata, i.e. the location and date when the tagged animal was released, and summarized detection events of tagged individuals.
 If readers are interested in the source dataset they may also inquire with the project PIs as listed here or on the OTN web site (https://members.oceantrack.org/project?ccode=NEP.HERG).
description: Abstract:The Pacific Ocean Shelf Tracking (POST) project was designed to develop and promote the application of acoustic tagging technology to study the life history of Pacific salmon and other species migrating along the continental shelf of western North America. POST envisioned the eventual creation of a permanent continental-scale telemetry system, however, during its existence more limited pilot-scale arrays were deployed, primarily concentrated in the Pacific Northwest. These included several acoustic receiver curtains between Vancouver Island and the mainland, creating an excellent means by which to monitor coastal marine animal migrations, especially by juvenile salmonids (smolts) migrating to sea (see projects QCS, JDF and NSOG). In addition to arrays on the continental shelf, POST equipment was deployed upstream and in the estuaries of several major salmon-producing rivers. POST arrays, and POST data, were incorporated into the OTN in 2012. The integration of these arrays, their equipment and the associated animal tagging projects into OTN's global network allowed for international, widespread monitoring of important species within the Northeast Pacific Ocean. Tracking data generated from the POST arrays can be applied to the development of fishery management policies aimed at the sustainable harvest of resources, and to the understanding and conservation of other marine and diadromous species. Additional details about specific tracking projects which were originally a part of POST are only available by contacting the associated researcher.
DOI: 10.15472/ihxnol
title: Diversidad de peces marinos y dulceacuícolas de Bahía Málaga

description: Con el objetivo de caracterizar la fauna íctica presente en los ambientes marinos, estuarinos y dulceacuícolas de Bahía Málaga se realizó un muestreo de 11 días en el marco de la Expedición Científica Pacifico 2021-II. El conjunto de datos contiene registros visuales en las zonas de estudio y datos de especímenes colectados a través de artes de pesca como atarraya, trasmallo, línea de mano, palangre y arpón. En total se registraron 128 especies pertenecientes a 47 familias distribuidas en 33 órdenes.
DOI: 10.15472/iqg4rz
title: Sistema de Monitoreo de Arrecifes Coralinos - SIMAC: Salud Coralina

description: Los datos se derivan de la línea de investigación del SIMAC: Sistema de monitoreo para los ambientes arrecifales en Colombia y evaluación de agentes de mortalidad coralina; dentro del programa de Biodiversidad y Ecosistemas Marinos. El proyecto busca generar información sobre la salud y la dinámica de los arrecifes coralinos en Colombia, mediante la evaluación de su estado. De esta forma contribuir al entendimiento y conservación del sistema arrecifal, así como al uso sostenible de sus recursos. En este conjunto de datos se reporta la información sobre la salud coralina en estaciones de monitoreo del SIMAC, ubicadas en el Mar Caribe y Océano Pacífico colombiano, que corresponde a un total de 46424 registros biológicos obtenidos entre 1998 y 2018.
DOI: 10.17031/1802
title: 2015 - 2018 Marine Biological Association of the United Kingdom (MBA) Western English Channel standard haul demersal fish survey data
DOI: 10.17031/jnfcip
title: 2015 Orkney Islands Council Harbour Authority (OICHA) Marine Non-Native Species Monitoring Programme

description: Orkney Islands Council marine non-native species survey. The aim of this survey was to determine the extent of non-native species in Orkney.
DOI: 10.14284/112
title: Fish community in Gazi Creek sampled between November 1990 and April 1991
DOI: 10.14284/238
title: Phytoplankton inventory in the Sluice Dock between 1989 and 1991
DOI: 10.5517/ccdc.csd.cc2fbyj8
title: CCDC 2244850: Experimental Crystal Structure Determination

description: Related Article: Jindong Cao|2023|CSD Communication|||
description: Related Article: Jindong Cao, Kunjie Liu, Mingzhen Quan, An Hou, Xingxing Jiang, Zheshuai Lin, Jing Zhao, Quanlin Liu|2023|Dalton Trans.|52|9368|doi:10.1039/D3DT01209C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/fyt9hw
title: Marine Environmental Monitoring - Marine Turtles

description: NBN Gateway Dataset GA000167
DOI: 10.15472/frvuvy
title: Registros de robalos juveniles (Centropomus undecimalis) en la Ciénaga Grande de Santa Marta, Colombia

description: En los ecosistemas acuáticos, los peces desempeñan un papel fundamental debido a que por lo general están ubicados en los niveles superiores de dichas redes. Los análisis de contenidos estomacales son una herramienta fundamental para el estudio de las redes tróficas. En la Ciénaga Grande de Santa Marta y en varias zonas del Caribe colombiano, el pez robalo (Centropomus undecimalis) posee alta importancia económica por la alta calidad de su carne, razón por la cual se convierte en una gran fuente de empleo para los pescadores de estas regiones. Por tanto, en el presente trabajo se pretende describir las dietas de los juveniles de C. undecimalis en la Ciénaga Grande de Santa Marta. Para esto, se analizarán los contenidos estomacales de peces capturados en faenas de pescadores de la región. Estos resultados, contribuirán en el conocimiento de la autoecología de la especie y generarán pautas para los planes de manejo del robalo en la CGSM. Este recurso contiene 112 registros de robalo capturados en la Ciénaga Grande Santa Marta, específicamente en el municipio de Puebloviejo durante octubre de 2019.
DOI: 10.25607/jicoxb
title: Brazil Estuaries Iter Coastal Habitats of Espirito Santo InQuES (macrofauna)

description: The PELD (Long-term Program of Ecological Research) Coastal Habitats of Espírito Santo is part of the Brazilian LTER program and started in 2017. It is located on the Eastern Coast of Brazil, and includes coastal ecosystems including estuaries, mangroves, coastal reefs and rhodolith beds. This is an innovative project to assess the temporal patterns in multiple coastal ecosystems in the Eastern Brazil Marine Ecoregion, where there is a decadal warming trend. The program associates research and conservation, at three Conservation units: Costa das Algas Environmental Protected Area, Santa Cruz Wildlife Refuge, and Municipal Reserves of Integral Protection of the mangroves of Piraquê-Açu and Piraquê-Mirim rivers (RPPAM). The project aims to investigate the interactions among abiotic, climatic and ecological dynamics in the benthic communities and Ichthyofauna assemblies associated with the estuaries, the mangroves and the Rhodolith beds. PELD-HCES counts with a research team coordinated by UFES in partnership with USP, UFBA, UFSB, UFF, UFPR, UNISUL, UFSC and the State University of Oregon, and funded by CNPQ, CAPES and FAPES.
DOI: 10.14284/223
title: Vertical distribution of meiofauna in the North Sea and the Westerschelde estuary in 1993 and 1994
DOI: 10.14284/25
title: Harpacticoida diversity in littoral zone of Kandalaksha Bay (White Sea)
DOI: 10.21966/7cmt-ca72
title: Zooplankton Bongo Net Data from the 2019 and 2020 Gulf of Alaska International Year of the Salmon Expeditions
title: Zooplancton Bongo Net Données de l'Année internationale des expéditions de saumon 2019 et 2020 dans le golfe d'Alaska

description: This record contains zooplankton occurrence data collected in the Gulf of Alaska (GoA) with a bongo net between February 19 - March 15, 2019, and March 14 – April 5, 2020, as part of the International Year of the Salmon High Seas Expedition. The bongo net (3 m length, 250 µm mesh, 50 cm diameter) was deployed at 58 stations, to a depth of 250 m and retrieved vertically at 1 m s-1. Volume of sea water filtered was determined using General Oceanics flowmeters and by multiplying effective distance travelled by the mouth area. After the bongo net deployment and recovery, the net was rinsed down into the cod end. Samples from one cod end were rinsed into a jar and preserved in 4 % formaldehyde for future taxonomic analysis. The other cod end was rinsed into a sieve and transferred below deck where it was subsequently size fractionated (250-500 µm, 500-1000 µm, 1000-2000 µm, 2000-4000 µm, and &gt;4000 µm) onto pre-weighed filters. Individuals larger than 4000 µm were measured, identified to species level, and stored in individual Eppendorf tubes. Size fractionated zooplankton samples were stored on dry ice. This record contains the zooplankton occurrence data from both cod ends, identified to the lowest taxonomic rank possible.
description: Cet enregistrement contient des données d'occurrence de zooplancton recueillies dans le golfe d'Alaska (GoA) avec un filet de bongo entre le 19 février et le 15 mars 2019 et du 14 mars au 5 avril 2020, dans le cadre de l'Année internationale de l'expédition de saumon en haute mer. Le filet à bongo (longueur de 3 m, maillage de 250 µm, diamètre de 50 cm) a été déployé à 58 stations, à une profondeur de 250 m et récupéré verticalement à 1 m s-1. Le volume d'eau de mer filtrée a été déterminé à l'aide des débitmètres General Oceanics et en multipliant la distance effective parcourue par la zone de l'embouchure. Après le déploiement et la récupération du filet de bongo, le filet a été rincé dans la morue. Les échantillons provenant d'une extrémité de morue ont été rincés dans un bocal et conservés dans du formaldéhyde à 4 % pour une analyse taxonomique ultérieure. L'autre extrémité de la morue a été rincée dans un tamis et transférée sous le pont où elle a ensuite été fractionnée en taille (250-500 µm, 500-1000 µm, 1000-2000 µm, 2000-4000 µm et &gt;4000 µm) sur des filtres pré-pesés. Les individus de plus de 4 000 µm ont été mesurés, identifiés au niveau de l'espèce et stockés dans des tubes d'Eppendorf individuels. Des échantillons de zooplancton fractionné par taille ont été stockés sur de la glace carbonique. Cet enregistrement contient les données d'occurrence du zooplancton des deux extrémités de la morue, identifiées au rang taxonomique le plus bas possible.
DOI: 10.15472/elg8ro
title: All Atlantic ocean sampling day South America

description: The study of the marine microbiome is essential to understanding the health of our oceans and their impact on the planet. These microorganisms play a crucial role in the regulation of biogeochemical cycles, oxygen production, degradation of pollutants and the marine food chain. In addition, the marine microbiome influences the global climate and is a valuable resource for biotechnology and medicine. Investigating this microscopic world helps us protect our marine ecosystems and address urgent environmental challenges.
description: DNA analysis through techniques such as amplicon sequencing (metabarcoding) allows the identification of both prokaryotic and eukaryotic microbial species in water samples. Metagenomics, on the other hand, gives us the ability to sequence all the genes present in the microbiome, providing information about gene abundances involved in metabolic pathways (profiles functional) and at different taxonomic levels (taxonomic profiles). Ocean Sampling Day (OSD) is a global scientific campaign that aims to analyze marine biodiversity and microbial function using molecular sequencing techniques. This dataset contains 2 occurrences that were taken in Puerto Colombia and Barranquilla the 9th of september 2023, both are identified up to domain Eukarya and Prokaryota.
DOI: 10.6092/eff90de9-adef-4df3-b2b5-1f90a43a4b0a
title: Microphytobenthos in Panarea Island. ECO2 Project

description: Microphytobenthos collected in Panarea Island in the framework of ECO2 Project.
description: At all sampling stations and during all campaigns, sediment samples were collected by scuba divers with cut-off plastic syringes (2.6 cm i.d.). At each station and each sampling period, four sediment cores were sampled from which one was dedicated to the grain-size analysis and the remaining three to the microphytobenthic abundance (ABU) and community composition. More important details can be found at: http://nodc.ogs.trieste.it/ipt/resource?r=microphytobenthos-eco2#methods
description: One ZIP file which contians the dataset in two formats: DwC-A file and a XLSX file which unites all Darwin-Core data files.
DOI: 10.15472/dpdzag
title: Registros de Thalassia testudinum con aparente afectación por Labyrinthula sp. en el marco del proyecto interinstitucional Invemar-Universidad Militar Nueva Granada

description: El recurso documentado corresponde a muestras de hojas del pasto marino, llamado "pasto tortuga" (Thalassia testudinum), colectado en dos localidades del Caribe colombiano, como lo son los Parques Nacionales Naturales Tayrona y Old Providence McBean Lagoon enmarcadas en el proyecto de cooperación Invemar-Universidad Militar Nueva Granada (INV-CIAS-2947-19).
DOI: 10.17031/6515474d3f18b
title: 2011 Marine Biological Association of the UK (MBA) Batten Bay Corella eumyota survey

description: Citizen Science timed search of Mount Battern for Corella eumyota.
DOI: 10.17031/l405kk
title: Infaunal abundance & biomass from sediment grabs in Belfast Lough as part of a habitat mapping project in 2018

description: This dataset contains information on infaunal abundance & biomass from sediment grabs in Belfast Lough as part of a larger & ongoing habitat mapping project. The sediment & infaunal survey was carried out in January 2018 by AFBI and this dataset was integrated into the larger mapping project since 2012. The project is joint with the British Geological Society and Belfast Harbour with the aim of mapping the seabed floor and updating it from more historical information. The seabed mapping was carried out on the White Ribbon vessel (British Geological society) using Kongsberg EM3002D multibeam and on the FPV Banríon Uladh using the same multibeam system. The benthic sampling in 2018 (this dataset) was carried out on board the RV Corystes using a day grab. Particle size analysis (PSA) was carried out and the infaunal samples were sent away to accredited taxonomic laboratories to be indentified. The most abundant species recorded was the echinoderm Amphiura filiformis and the most frequently recorded (present in all samples) was the hydrozoan sertulariidae.
DOI: 10.25607/bsfxak
title: A checklist of the bentic marine algae of Corsica

description: This dataset contains occurrences of macroalgae in Corsica from the report Boudouresque C. F., Perret-Boudouresque M. M. (1987). A checklist of the bentic marine algae of Corsica. GIS Posidonie publ., Marseille, Fr. : 1-121.
DOI: 10.4225/15/5ae7cf565cebb
title: Abundances of benthic invertebrate species in the CEAMARC region 2007/08
DOI: 10.14284/93
title: Typhloplanoida from the southern hemisphere (Zanzibar, Kenya, Kerguelen, Australia and Weddell Sea)
DOI: 10.17031/64d0ad8629749
title: 2017 North Devon Area of Outstanding Natural Beauty (AONB) Combe Martin Devon Bioblitz

description: 8 hour schools and public survey of all species in all habitats within the Combe Martin area, run by North Devon AONB and held on 14th March 2017. The aim of the survey was to record as many species as possible throughout the day. Records include intertidal and coastal habitat marine species.  Part of a larger dataset that includes terrestrial and freshwater species.
DOI: 10.15468/ozpv8n
title: Inventaire National du Patrimoine Naturel : Observations d'hippocampes et syngnathes de France métropolitaine: Programme Hippo-ATLAS

description: L'Hippo-ATLAS a pour objectif de collecter des données d’observations sur les espèces d’hippocampes et de syngnathes des côtes d'Europe et de Méditerranée. Ce projet a pour objectifs de afin de préciser leur répartition ; de constituer une base photographique pour étudier et illustrer leur variabilité ; de collecter des données sur leur habitat dans le but de mieux comprendre leur mode de vie et leur vulnérabilité. Les données d’observation sont collectées par des plongeurs, pêcheurs et naturalistes amateurs. Un outil de saisie en ligne est disponible sur le site internet de Peau Bleue. Au 01/01/2011, la base contient environ 220 données. Celle-ci est complétée annuellement. Outre les données essentielles (espèce, lieu, date, observateur), sont notamment notés facultativement pour chaque observation : le sexe, la taille, la coloration, la profondeur, le substrat.