cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2k7s8w
title: CCDC 2360968: Experimental Crystal Structure Determination

description: Related Article: Kaito Seino, Tsubasa Okano, Koki Oya, Hiroshi Katagiri, Takashi Murase
|2024|Chem.-Eur.J.|30|e202402445|doi:10.1002/chem.202402445
description: Related Article: Kaito Seino, Tsubasa Okano, Koki Oya, Hiroshi Katagiri, Takashi Murase|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k7s9x
title: CCDC 2360969: Experimental Crystal Structure Determination

description: Related Article: Kaito Seino, Tsubasa Okano, Koki Oya, Hiroshi Katagiri, Takashi Murase
|2024|Chem.-Eur.J.|30|e202402445|doi:10.1002/chem.202402445
description: Related Article: Kaito Seino, Tsubasa Okano, Koki Oya, Hiroshi Katagiri, Takashi Murase|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k7sby
title: CCDC 2360970: Experimental Crystal Structure Determination

description: Related Article: Kaito Seino, Tsubasa Okano, Koki Oya, Hiroshi Katagiri, Takashi Murase
|2024|Chem.-Eur.J.|30|e202402445|doi:10.1002/chem.202402445
description: Related Article: Kaito Seino, Tsubasa Okano, Koki Oya, Hiroshi Katagiri, Takashi Murase|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k8z83
title: CCDC 2362115: Experimental Crystal Structure Determination

description: Related Article: Yefang Yang, Dechao Li, ShaoWen Qie, Shuai Su, Ruijie Xu, Wenting Li, Wenping Hu, Ming Hu|2025|Sci.China.Chem.|68|891|doi:10.1007/s11426-024-2235-6
description: Related Article: Yefang Yang|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k8z94
title: CCDC 2362116: Experimental Crystal Structure Determination

description: Related Article: Yefang Yang, Dechao Li, ShaoWen Qie, Shuai Su, Ruijie Xu, Wenting Li, Wenping Hu, Ming Hu|2025|Sci.China.Chem.|68|891|doi:10.1007/s11426-024-2235-6
description: Related Article: Yefang Yang|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m5lxb
title: CCDC 2418462: Experimental Crystal Structure Determination

description: Related Article: uoshi Zhang, Jiajia Sheng, Wenjing Wang, Kongzhao Su, Daqiang Yuan|2025|Chin.J.Chem.|43|1855|doi:10.1002/cjoc.70053
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m5lyc
title: CCDC 2418463: Experimental Crystal Structure Determination

description: Related Article: uoshi Zhang, Jiajia Sheng, Wenjing Wang, Kongzhao Su, Daqiang Yuan|2025|Chin.J.Chem.|43|1855|doi:10.1002/cjoc.70053
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m6wyp
title: CCDC 2419703: Experimental Crystal Structure Determination

description: Related Article: Kosuke Yasui, Masayuki Miyaoka, Yuichiro Tomishima, Koji Hirano|2025|Bull.Chem.Soc.Jpn.|98|uoaf043|doi:10.1093/bulcsj/uoaf043
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m6x0s
title: CCDC 2419705: Experimental Crystal Structure Determination

description: Related Article: Kosuke Yasui, Masayuki Miyaoka, Yuichiro Tomishima, Koji Hirano|2025|Bull.Chem.Soc.Jpn.|98|uoaf043|doi:10.1093/bulcsj/uoaf043
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mxg9b
title: CCDC 2440422: Experimental Crystal Structure Determination

description: Related Article: Yijun Sun, Xiangyu Gao, Zhonghui Huang, Can Li, Yuanyuan Cheng, Li-Wen Tian|2025|J.Nat.Prod.|88|1481|doi:10.1021/acs.jnatprod.5c00424
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2n9y75
title: CCDC 2452417: Experimental Crystal Structure Determination

description: Related Article: Siddhima Sharma, Lalima Sharma, Renu Rathore, D.Vijay, Mangal Shree Dulawat|2025|Asian J.Chem.|37|1509|doi:10.14233/ajchem.2025.33500
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.18419703
title: Table 1 in Morphological analysis and description of the ovaries of female silky sharks, Carcharhinus falciformis (Müller & Henle, 1839)

description: Table 1. Relationships between the maturity stages of female silky sharks, with total length of the specimens and ovary weight.
Maturity stageLength range (cm)Mean ± S.DOvary weight Range (gr.)Mean ± S.DImmature70-133101.5±44.5460-9376.5±23.33Maturing185-200192.5±10.60110-195152.5±60.10Mature240-285262.5±31.81220-405 312.5±130.81
description: Published as part of Rêgo, Mariana G., Hazin, Fábio H. V., Neto, Joaquim Evêncio, Oliveira, P. G. V., Soares, Maria Goretti, Torres, Keilla Regina L. S., Lana, Fernanda O., Roque, Pollyana C. G., Santos, Natália L. & Coelho, Rui, 2013, Morphological analysis and description of the ovaries of female silky sharks, Carcharhinus falciformis (Müller & Henle, 1839), pp. 817 in Neotropical Ichthyology 11 (4) on page 817, DOI: 10.1590/S1679-62252013000400009, http://zenodo.org/record/13258995
DOI: 10.5281/zenodo.18419704
title: Table 1 in Morphological analysis and description of the ovaries of female silky sharks, Carcharhinus falciformis (Müller & Henle, 1839)

description: Table 1. Relationships between the maturity stages of female silky sharks, with total length of the specimens and ovary weight.
Maturity stageLength range (cm)Mean ± S.DOvary weight Range (gr.)Mean ± S.DImmature70-133101.5±44.5460-9376.5±23.33Maturing185-200192.5±10.60110-195152.5±60.10Mature240-285262.5±31.81220-405 312.5±130.81
description: Published as part of Rêgo, Mariana G., Hazin, Fábio H. V., Neto, Joaquim Evêncio, Oliveira, P. G. V., Soares, Maria Goretti, Torres, Keilla Regina L. S., Lana, Fernanda O., Roque, Pollyana C. G., Santos, Natália L. & Coelho, Rui, 2013, Morphological analysis and description of the ovaries of female silky sharks, Carcharhinus falciformis (Müller & Henle, 1839), pp. 817 in Neotropical Ichthyology 11 (4) on page 817, DOI: 10.1590/S1679-62252013000400009, http://zenodo.org/record/13258995
DOI: 10.5281/zenodo.18419705
title: Table 2 in Morphological analysis and description of the ovaries of female silky sharks, Carcharhinus falciformis (Müller & Henle, 1839)

description: Table 2. Relationships between the diameter of the ovary and oocyte diameter of female silky sharks.
Maturity stageDiameter of the ovary Range (cm)Mean ± S.DOocyte diameter Range(mm)Mean ± S.DImmature1.0-3.12.05±1.480.1-0.20.15±0.07Maturing5.2-6.05.6±0.561.0-2.01.5±0.70Mature5.8-7.86.8±1.413.0-4.33.35±0.57
description: Published as part of Rêgo, Mariana G., Hazin, Fábio H. V., Neto, Joaquim Evêncio, Oliveira, P. G. V., Soares, Maria Goretti, Torres, Keilla Regina L. S., Lana, Fernanda O., Roque, Pollyana C. G., Santos, Natália L. & Coelho, Rui, 2013, Morphological analysis and description of the ovaries of female silky sharks, Carcharhinus falciformis (Müller & Henle, 1839), pp. 817 in Neotropical Ichthyology 11 (4) on page 817, DOI: 10.1590/S1679-62252013000400009, http://zenodo.org/record/13258995
DOI: 10.5281/zenodo.18419706
title: Table 2 in Morphological analysis and description of the ovaries of female silky sharks, Carcharhinus falciformis (Müller & Henle, 1839)

description: Table 2. Relationships between the diameter of the ovary and oocyte diameter of female silky sharks.
Maturity stageDiameter of the ovary Range (cm)Mean ± S.DOocyte diameter Range(mm)Mean ± S.DImmature1.0-3.12.05±1.480.1-0.20.15±0.07Maturing5.2-6.05.6±0.561.0-2.01.5±0.70Mature5.8-7.86.8±1.413.0-4.33.35±0.57
description: Published as part of Rêgo, Mariana G., Hazin, Fábio H. V., Neto, Joaquim Evêncio, Oliveira, P. G. V., Soares, Maria Goretti, Torres, Keilla Regina L. S., Lana, Fernanda O., Roque, Pollyana C. G., Santos, Natália L. & Coelho, Rui, 2013, Morphological analysis and description of the ovaries of female silky sharks, Carcharhinus falciformis (Müller & Henle, 1839), pp. 817 in Neotropical Ichthyology 11 (4) on page 817, DOI: 10.1590/S1679-62252013000400009, http://zenodo.org/record/13258995
DOI: 10.6084/m9.figshare.31111808
title: Functional proteomic analysis reveals <i>mglB</i>-mediated meropenem resistance and its reversal by galactose

description: Salmonella enteritidis is a globally prevalent zoonotic pathogen with a broad host range and high pathogenicity, ranking among the most common serotypes within the <i>Salmonella genus</i>. The widespread and often indiscriminate use of antibiotics has driven a continual rise in antimicrobial resistance among S. Enteritidis strains, posing a significant threat to public health. In this study, we employed a quantitative proteomics approach to investigate differential protein expression between meropenem-sensitive and -resistant S. Enteritidis strains. Bioinformatic analyses revealed significant downregulation of all the genes associated with the bacterial chemotaxis pathway in the resistant strain. To further explore the functional relevance of this pathway, we generated deletion mutants of 15 chemotaxis-related genes and assessed their susceptibility to meropenem. Notably, deletion of the <i>mglB</i> gene was associated with increased resistance. Given the known role of <i>mglB</i> in galactose transport, we hypothesized and subsequently confirmed that exogenous galactose supplementation enhances the bactericidal activity of meropenem against resistant strains. This synergistic effect was further validated in animal infection models. Collectively, these findings provide novel insights into the molecular basis of meropenem resistance in S. Enteritidis and highlight the potential of metabolic modulation as a strategy to restore antibiotic efficacy.
DOI: 10.6084/m9.figshare.31111808.v1
title: Functional proteomic analysis reveals <i>mglB</i>-mediated meropenem resistance and its reversal by galactose

description: Salmonella enteritidis is a globally prevalent zoonotic pathogen with a broad host range and high pathogenicity, ranking among the most common serotypes within the <i>Salmonella genus</i>. The widespread and often indiscriminate use of antibiotics has driven a continual rise in antimicrobial resistance among S. Enteritidis strains, posing a significant threat to public health. In this study, we employed a quantitative proteomics approach to investigate differential protein expression between meropenem-sensitive and -resistant S. Enteritidis strains. Bioinformatic analyses revealed significant downregulation of all the genes associated with the bacterial chemotaxis pathway in the resistant strain. To further explore the functional relevance of this pathway, we generated deletion mutants of 15 chemotaxis-related genes and assessed their susceptibility to meropenem. Notably, deletion of the <i>mglB</i> gene was associated with increased resistance. Given the known role of <i>mglB</i> in galactose transport, we hypothesized and subsequently confirmed that exogenous galactose supplementation enhances the bactericidal activity of meropenem against resistant strains. This synergistic effect was further validated in animal infection models. Collectively, these findings provide novel insights into the molecular basis of meropenem resistance in S. Enteritidis and highlight the potential of metabolic modulation as a strategy to restore antibiotic efficacy.
DOI: 10.6084/m9.figshare.31119527
title: Immune pathways and prenatal/perinatal environmental exposures contribute to epigenetic gestational age prediction and acceleration

description: DNA methylation (DNAm), capturing chronological gestational age (GA) and epigenetic gestational age acceleration (EGAA), can be modified by environmental exposures. The Asthma&Allergy array is a new DNAm array developed with content focused on asthma and allergy loci. The association between content on the Asthma&Allergy array and chronological GA and EGAA has not been evaluated alone or in the context of prenatal/perinatal exposures. We performed an epigenome wide association study (EWAS) chronological GA at single CpG sites and regions in cord blood from 391 newborn children from a Detroit-based birth cohort. We further constructed a multi-CpG site methylation model to predict chronological GA. Also, associations between prenatal/perinatal environmental factors with GA, epigenetic gestational age (EGA), and EGAA were assessed. We identified 2,435 CpG sites associated with chronological GA, and CpGs within the HLA class II locus (<i>HLA-DRB1, HLA-DQB1, HLA-DRB6</i>) were among the most significantly associated with chronological GA. Our multi-CpG site model attained higher predictive accuracy (R<sup>2</sup> = 0.88) comparable to other published methods. Using genes implicated in region-based analyses (<i>n</i> = 395 regions), the pathways most significantly enriched with chronological GA-associated CpGs included T helper 1(Th1) and 2(Th2) activation, B-cell development, and IL-10 signaling, which were also enriched in at least one of the other published epigenetic GA clocks. In multi-exposure models, infant’s first-born status and maternal parity were associated with EGAA. Our findings highlight enrichment for T cell modulated pathways and antigen presentation as biological processes associated with chronological GA, as well as prenatal/perinatal factors that may affect EGAA.
DOI: 10.6084/m9.figshare.31119527.v2
title: Immune pathways and prenatal/perinatal environmental exposures contribute to epigenetic gestational age prediction and acceleration

description: DNA methylation (DNAm), capturing chronological gestational age (GA) and epigenetic gestational age acceleration (EGAA), can be modified by environmental exposures. The Asthma&Allergy array is a new DNAm array developed with content focused on asthma and allergy loci. The association between content on the Asthma&Allergy array and chronological GA and EGAA has not been evaluated alone or in the context of prenatal/perinatal exposures. We performed an epigenome wide association study (EWAS) chronological GA at single CpG sites and regions in cord blood from 391 newborn children from a Detroit-based birth cohort. We further constructed a multi-CpG site methylation model to predict chronological GA. Also, associations between prenatal/perinatal environmental factors with GA, epigenetic gestational age (EGA), and EGAA were assessed. We identified 2,435 CpG sites associated with chronological GA, and CpGs within the HLA class II locus (<i>HLA-DRB1, HLA-DQB1, HLA-DRB6</i>) were among the most significantly associated with chronological GA. Our multi-CpG site model attained higher predictive accuracy (R<sup>2</sup> = 0.88) comparable to other published methods. Using genes implicated in region-based analyses (<i>n</i> = 395 regions), the pathways most significantly enriched with chronological GA-associated CpGs included T helper 1(Th1) and 2(Th2) activation, B-cell development, and IL-10 signaling, which were also enriched in at least one of the other published epigenetic GA clocks. In multi-exposure models, infant’s first-born status and maternal parity were associated with EGAA. Our findings highlight enrichment for T cell modulated pathways and antigen presentation as biological processes associated with chronological GA, as well as prenatal/perinatal factors that may affect EGAA.
DOI: 10.6084/m9.figshare.31119527.v1
title: Immune pathways and prenatal/perinatal environmental exposures contribute to epigenetic gestational age prediction and acceleration

description: DNA methylation (DNAm), capturing chronological gestational age (GA) and epigenetic gestational age acceleration (EGAA), can be modified by environmental exposures. The Asthma&Allergy array is a new DNAm array developed with content focused on asthma and allergy loci. The association between content on the Asthma&Allergy array and chronological GA and EGAA has not been evaluated alone or in the context of prenatal/perinatal exposures. We performed an epigenome wide association study (EWAS) chronological GA at single CpG sites and regions in cord blood from 391 newborn children from a Detroit-based birth cohort. We further constructed a multi-CpG site methylation model to predict chronological GA. Also, associations between prenatal/perinatal environmental factors with GA, epigenetic gestational age (EGA), and EGAA were assessed. We identified 2,435 CpG sites associated with chronological GA, and CpGs within the HLA class II locus (<i>HLA-DRB1, HLA-DQB1, HLA-DRB6</i>) were among the most significantly associated with chronological GA. Our multi-CpG site model attained higher predictive accuracy (R<sup>2</sup> = 0.88) comparable to other published methods. Using genes implicated in region-based analyses (<i>n</i> = 395 regions), the pathways most significantly enriched with chronological GA-associated CpGs included T helper 1(Th1) and 2(Th2) activation, B-cell development, and IL-10 signaling, which were also enriched in at least one of the other published epigenetic GA clocks. In multi-exposure models, infant’s first-born status and maternal parity were associated with EGAA. Our findings highlight enrichment for T cell modulated pathways and antigen presentation as biological processes associated with chronological GA, as well as prenatal/perinatal factors that may affect EGAA.
DOI: 10.15468/dl.yghf6j
title: Occurrence Download

description: A dataset containing 13999 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-52.36465 4.90348,-52.35565 4.89373,-52.33289 4.89341,-52.3262 4.88481,-52.31745 4.86858,-52.32127 4.84662,-52.29581 4.82847,-52.2811 4.84914,-52.27758 4.84889,-52.26737 4.85172,-52.28976 4.88831,-52.30268 4.88703,-52.30631 4.90168,-52.32254 4.89898,-52.3192 4.90789,-52.33459 4.9283,-52.35629 4.91038,-52.3621 4.90558,-52.36465 4.90348))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 13999 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000515-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f9ejqu
title: Occurrence Download

description: A dataset containing 62563 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sander vitreus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 62563 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000487-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.777sjp
title: Occurrence Download

description: A dataset containing 83680 records in GBIF matching the query:
SELECT datasetKey, countryCode, COUNT(*) FROM occurrence WHERE continent = 'EUROPE' GROUP BY datasetKey, countryCode

 The dataset's 83680 records were derived from 38542 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000512-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pcsxqu
title: Occurrence Download

description: A dataset containing 661 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is TICKS (ACARI: IXODIDAE) IN KARELIA",
 "Geometry POLYGON((15.85277 55.24421,52.14723 55.24421,52.14723 69.75579,15.85277 69.75579,15.85277 55.24421))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 661 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025061-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d7pgcw
title: Occurrence Download

description: A dataset containing 648 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CAN.9_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Bombus pensylvanicus (De Geer, 1773)"
 ]
}

 The dataset includes 648 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010478-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.