cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13379159.v1
title: Supplementary Material for: Effectiveness of a Guided Internet- and Mobile-Based Intervention for Patients with Chronic Back Pain and Depression (WARD-BP): A Multicenter, Pragmatic Randomized Controlled Trial

description: <b><i>Introduction:</i></b> There is neither strong evidence on effective treatments for patients with chronic back pain (CBP) and depressive disorder nor sufficiently available mental health care offers. <b><i>Objective:</i></b> The aim is to assess the effectiveness of internet- and mobile-based interventions (IMI) as a scalable approach for treating depression in a routine care setting. <b><i>Methods:</i></b> This is an observer-masked, multicenter, pragmatic randomized controlled trial with a randomization ratio of 1:1.<b><i></i></b>Patients with CBP and diagnosed depressive disorder (mild to moderate severity) were recruited from 82 orthopedic rehabilitation clinics across Germany. The intervention group (IG) received a guided depression IMI tailored to CBP next to treatment-as-usual (TAU; including medication), while the control group (CG) received TAU. The primary outcome was observer-masked clinician-rated Hamilton depression severity (9-week follow-up). The secondary outcomes were: further depression outcomes, pain-related outcomes, health-related quality of life, and work capacity. Biostatistician blinded analyses using regression models were conducted by intention-to-treat and per protocol analysis. <b><i>Results:</i></b> Between October 2015 and July 2017, we randomly assigned 210 participants (IG, <i>n</i> = 105; CG, <i>n</i> = 105), mostly with only a mild pain intensity but substantial pain disability. No statistically significant difference in depression severity between IG and CG was observed at the 9-week follow-up (β = –0.19, 95% CI –0.43 to 0.05). Explorative secondary depression (4/9) and pain-related (4/6) outcomes were in part significant (<i>p</i> &lt; 0.05). Health-related quality of life was significantly higher in the IG. No differences were found in work capacity. <b><i>Conclusion:</i></b> The results indicate that an IMI for patients with CBP and depression in a routine care setting has limited impact on depression. Benefits in pain and health-related outcomes suggest that an IMI might still be a useful measure to improve routine care.
DOI: 10.6084/m9.figshare.14456385.v2
title: COVID-19 rumor dataset

description: A COVID-19 misinformation / fake news / rumor / disinformation dataset collected from online social media and news websites. <br>Usage note:Misinformation detection, classification, tracking, prediction.<br>Misinformation sentiment analysis.Rumor veracity classification, comment stance classification.Rumor tracking, social network analysis.<br>Data pre-processing and data analysis codes available at https://github.com/MickeysClubhouse/COVID-19-rumor-dataset<br><b><i>Please see full info in our GitHub link.</i></b><br><b>Cite us:</b><b>Cheng, Mingxi, et al. "A COVID-19 Rumor Dataset." <i>Frontiers in Psychology</i> 12 (2021): 1566.</b><br><pre>@article{cheng2021covid, title={A COVID-19 Rumor Dataset}, author={Cheng, Mingxi and Wang, Songli and Yan, Xiaofeng and Yang, Tianqi and Wang, Wenshuo and Huang, Zehao and Xiao, Xiongye and Nazarian, Shahin and Bogdan, Paul}, journal={Frontiers in Psychology}, volume={12}, pages={1566}, year={2021}, publisher={Frontiers} }</pre>
DOI: 10.6084/m9.figshare.28473765.v1
title: Network Varying Coefficient Model

description: We propose a novel network-varying coefficient model that extends traditional varying coefficient models to accommodate network data. The main idea is to model the regression coefficients as the functions of the latent “locations” of network nodes that drive formation of the network. To estimate the model, we identify the latent “locations” via the latent space model and then develop an iterative projected gradient descent algorithm by optimizing the network parameters and regression coefficients alternately. The non-asymptotic bounds of the estimated coefficient matrix are obtained. In addition, a Bayesian information criterion is proposed to select the dimension of the latent space. Moreover, we employ a penalized method to select covariates with varying coefficients that are significant to the response variable, and demonstrate the theoretical properties of selection. The utility of the proposed model is illustrated via simulation studies and a real-world application in the field of finance by analyzing the relationship between stock returns and their corresponding financial ratios from a network perspective.
DOI: 10.6084/m9.figshare.28666511.v1
title: Dataset for "Camera trap records of native and non-native mammalian carnivores in urban forests of southern Kyoto, central Japan"

description: Camera trap records data of mesocarnivores in southern Kyoto, central Japan.Only the data on effective images (65 independent observations from the Uji Campus site and 83 from the Uji River site) of mesocarnivore species are presented, excluding failed detections of any animals.Independent observations were defined as images of the same species taken at the same camera station within a 30-minute interval, counted as a single observation.*Biats were applied at the Uji Campus site (TF1-2 and TO1-2), but not at the Uji River site (UF1-6).
DOI: 10.6084/m9.figshare.29108477.v1
title: NU1 Chipseq

description: bigwig files chipseq data
DOI: 10.6084/m9.figshare.19236477.v1
title: Breast Tissue Data Set

description: Adaptation of http://archive.ics.uci.edu/ml/datasets/Breast+Tissue<br>Ready for usage with ehrapy
DOI: 10.6084/m9.figshare.22679080.v11
title: Supplementary Tables for Veseli et al. 2023

description: Supplementary tables and Supplementary Information Files for the study by Veseli et al. titled "High metabolic independence is a determinant of microbial resilience in the face of gut stress" (https://doi.org/10.7554/eLife.89862.1).
DOI: 10.6084/m9.figshare.28191971.v1
title: <b>Soil C mineralization and C-Fe coupling: a trade-off between Fenton reaction and </b><b>microbial activity</b><b> under straw mulching in banana orchards</b>

description: Straw mulching influences soil carbon (C) cycling by adding organic matter and modifying the soil structure, with soil iron (Fe)-associated C (Fe-OC) and reactive oxygen species (ROS) playing critical roles in this process.<b> </b>However, the changes in soil Fe-OC and ROS following mulching in banana orchards remain unclear. This study established experimental fields with 3 years of continuous straw mulching to examine its effects on soil Fe-OC, ROS, and soil C mineralization. Straw mulching weakened the Fenton reaction by increasing the soil pH, soil organic C, and soil water content, thereby decreasing the ROS content. The reduced Fe-OC was attributed to the weakening of the Fenton reaction, the decreased reactive Fe oxides, and the elevated soil pH. Although straw mulching negatively impacted soil C mineralization via reducing ROS, it also promoted soil C mineralization through enhancing microbial activity and decreasing Fe-OC, resulting in significantly increased soil C mineralization. The multi-batch straw mulching pattern in banana orchards resulted in different dynamics in Fe-OC and soil C mineralization in the first year after mulching compared to the subsequent two years. This mechanism, by which straw mulching promotes soil C mineralization through weakening the Fenton reaction, decreasing Fe-OC, and increasing microbial activity, contributes to a deeper understanding of C cycling in agricultural ecosystems under straw mulching.
DOI: 10.6084/m9.figshare.3569106.v1
title: Appendix C. Effects of perturbations to predator mortality rates for unequal predator conversion efficiencies.

description: Effects of perturbations to predator mortality rates for unequal predator conversion efficiencies.
DOI: 10.17632/5g5x34jk7f
title: Program for quantum wave-packet dynamics with time-dependent potentials

description: Abstract We present a program to simulate the dynamics of a wave packet interacting with a time-dependent potential. The time-dependent Schrödinger equation is solved on a one-, two-, or three-dimensional spatial grid using the split operator method. The program can be compiled for execution either on a single processor or on a distributed-memory parallel computer. Title of program: wavepacket Catalogue Id: AEQW_v1_0 Nature of problem Solves the time-dependent Schrödinger equation for a single particle interacting with a time-dependent potential. Versions of this program held in the CPC repository in Mendeley Data AEQW_v1_0; wavepacket; 10.1016/j.cpc.2013.09.012 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.6084/m9.figshare.12433823.v3
title: Ocean plastic data from the 2018-2019 voyages aboard RV Pangaea, Australia

description: Here we provide a .xlsx file containing data associated with a field study sampling Australian waters to quantify plastic pollution in coastal areas. Please refer to the first tab (Read Me) in the Excel file for a detailed explanation of the data. <br>The sampling occurred between the 18th of September 2018 and 10th of March 2019 during 4 voyages in Australian waters- Ashmore Reef and Long Reef, located north-west of Australia and Esperance and Bremer Bay, located south-west of Australia. The sites for this field campaign were selected mostly at random, except for a few sites in Ashmore Reef targeting the coastal fronts encountered, with visible accumulated plastics, organisms, and feeding megafauna. Sampling was done using manta trawls and drone transects, with additional random snorkelling surveys within the identified CGPs. The plastics found in the samples were characterised by size, type, colour, and weight in the laboratory. <br>If you have any questions or comments, please contact us at bru_calma@hotmail.com<br>
DOI: 10.25403/upresearchdata.13911146.v1
title: Portfolio of evidence for consulting project

description: Researcher was doing Consulting Project. It contained 3 deliverables namely1. Consulting Business Plan2. Development of Consulting Toolkits; and3. Consulting Project with a specific company<br>I collected data for the consulting project through interviews, and company documents. I also did desktop research and analysed industry reports.
DOI: 10.6084/m9.figshare.14211233.v1
title: mBio_Wang_etal_2020_supplement_TableS4

description: <b>Supplemental Table S4. Gene ontology (GO) terms associated with differentially expressed genes. </b>The first column denotes the GO term, the second column identifies the number of pairwise comparison with significant enrichment for that term, and the third column identifies all pairwise comparisons in which the GO term was identified. Tabs are broken out by “Component”, “Process”, and “Function”.
DOI: 10.6084/m9.figshare.21444282.v1
title: Fine-grained Population Maps for Tanzania and Zambia

description: Official dataset to paper "Fine-grained Population Mapping from Coarse Census Counts and Open Geodata".
DOI: 10.6084/m9.figshare.24470161.v2
title: Data for Temporal dynamics of species richness and composition in a peri-urban tropical frog community in central Brazil

description: Analyzing the temporal dynamics of ecological communities can shed light on coexistence mechanisms and help understand how populations and communities will behave in the face of climate change. However, little is known about how frog communities respond to climate in urban ecosystems, especially in the Global South. Here, we analyzed how frog species richness and abundance are influenced by microclimate both intra- and inter-annually. We surveyed a peri-urban area in central Brazil, monthly for three years. To test the effect of microclimate on species richness and abundance, we used Generalized Additive Mixed-effects Models. We assessed seasonality using circular statistics. We also tested for differences in temporal beta diversity within and among years by estimating species disappearance and temporal rank shift, in addition to a multivariate model-based method to test the effect of year on species composition. Finally, we tested how taxonomic and phylogenetic alpha diversity changed through time using a novel approach based on Hill numbers. We found that species richness varied little among years and was affected only by photoperiod, while species abundance was more variable both between and within years, being mostly affected by humidity, temperature, and photoperiod. Species composition varied little between years, mostly between the first and subsequent years. Conversely, beta diversity was highest within years. Only the effective taxonomic richness changed significantly through time. Our results help not only understand temporal mechanisms that allow species coexistence, but also allow to make inferences about the impact of urbanization on biodiversity in recently urbanized landscapes, showing that species composition in peri-urban sites remains unaltered in a mid-timescale, especially when climate conditions changes little across years.
DOI: 10.6084/m9.figshare.4300043.v3
title: Urai et al. (2017) Pupil-linked arousal is driven by decision uncertainty and alters serial choice bias. Nature Communications

description: This is the data to replicate all analyses from Urai AE, Braun A, Donner THD. (2017) Pupil-linked arousal is driven by decision uncertainty and alters serial choice bias.<br>See https://github.com/anne-urai/pupilUncertainty for the analysis code, including detailed instructions for replicating the figures from the manuscript.
DOI: 10.6084/m9.figshare.9896198.v1
title: HLPa2_1.fq.gz

description: The sequence of bacteria in 0-10 cm plantation soil in Hulunbuir Sandy Land
DOI: 10.17632/5tz79rtd39
title: Medicinal Leaf Dataseat

description: Indonesia is enriched and guarded with various plants. This plant is useful in many ways in the field of health such as medicinal formulations, the production of herbal products, and medicines to cure many diseases. The traditional Indian medicine system is widely accepted even to this day. India is a rich country to be a habitat for various medicinal plants. Many parts of the plant such as leaves, bark, roots, seeds, fruits, and many more are used as ingredients for the production of herbal remedies. Herbal remedies are preferred in developing and developed countries as an alternative medicine mainly because there are no side effects on the body. Studies reveal that to build intelligent systems for medicinal herb recognition requires a decent plant leaf dataset size. The dataset consists of two species of herbal leaves such as Citrus hystrix and Carica papaya. The dataset consists of 100 images of two species of herbal leaves. Each species consists of 50 high-quality images. Folders are named after scientific names. The picked leaves come from different plants of the same species available around the house. Healthy and mature leaves are selected for the dataset. The tools used are mobile cameras (Model: Asus Zenfone M2 Max for Carica Papaya and iphone Xr for Citrus hystrix). The leaf images in the dataset are arranged in such a fitting position to take pictures clearly in training each machine learning and deep learning model.  By releasing this dataset to the public, we hope to stimulate research on medicinal plants where the current lack of public datasets is one of the major obstacles to progress.
DOI: 10.17632/kf4x65tmx3
title: Potato Stem Counting

description: This data shows predictions of potato meristem numbers in 45 varieties and the counts made by image analysis and an RCNN object detector. It also contains the image data of the potatoes from which the detectors made predictions. For each row in "finaldata.xlsx", the number in column "plot" is related to one image in the "images" folder with the same number as the image title.
DOI: 10.6084/m9.figshare.12896507.v1
title: Supplementary Material for: Do Different Methods Yield Equivalent Estimations of Brain Size in Birds?

description: The ratio of brain size to body size (relative brain size) is often used as a measure of relative investment in the brain in ecological and evolutionary studies on a wide range of animal groups. In birds, a variety of methods have been used to measure the brain size part of this ratio, including endocranial volume, fixed brain mass, and fresh brain mass. It is still unclear, however, whether these methods yield the same results. Using data obtained from fresh corpses and from published sources, this study shows that endocranial volume, mass of fixed brain tissue, and fresh mass provide equivalent estimations of brain size for 48 bird families, in 19 orders. We found, however, that the various methods yield significantly different brain size estimates for hummingbirds (Trochilidae). For hummingbirds, fixed brain mass tends to underestimate brain size due to reduced tissue density, whereas endocranial volume overestimates brain size because it includes a larger volume than that occupied by the brain.
DOI: 10.6084/m9.figshare.22140060.v1
title: Langwig WNS fat Supplement from Shifting effects of host physiological condition following pathogen establishment

description: Supplemental tables and figures
DOI: 10.6084/m9.figshare.25422577.v2
title: UCEs and mitogenome matrices for phylogenomic analyses

description: Here we characterized several mitogenomes and conducted phylogenetic analyses of both Ultraconserved Elements (UCEs) and mitochondrial genes matrices of representative Doryctinae genera to assess the monophyly and higher-level classification of the subfamily. The UCE matrices were constructed using different percentage of taxa completeness, while the mitogenome matrix was constructed using only the protein-coding genes (PCG) and removing regions of ambiguous alignment (RAA).
DOI: 10.17632/vcpz47r3sv
title: Borehole log Collection

description: For peer review reference only
DOI: 10.6084/m9.figshare.13379630.v1
title: Path learning in individuals with Down syndrome: the challenge of learning condition and of cognitive abilities

description: The dataset associated with the paper titled "Path learning in individuals with Down syndrome: the challenge of learning condition and of cognitive abilities". All variable names are reported in the first row and are self-explaining<br>
DOI: 10.6084/m9.figshare.14317331.v2
title: Kim et al. Adenine vs. 5/6 Nephrectomy in Mice: Impact on Skeletal Myopathy

description: Raw data set for Kim et al.<br><b>Skeletal myopathy in CKD: a comparison of adenine-induced nephropathy and 5/6 nephrectomy models in mice</b><b> </b>Kyoungrae Kim<sup>1</sup>, Erik M. Anderson<sup>2,4</sup>, Trace Thome<sup>1</sup>, Guanyi Lu<sup>2</sup>, Zachary R. Salyers<sup>1</sup>, Tomas A. Cort<sup>1</sup>, Kerri A. O’Malley<sup>2,4</sup>, Salvatore T. Scali<sup>2,4,#</sup>, Terence E. Ryan<sup>1,3,#</sup>. <sup>1</sup>Department of Applied Physiology and Kinesiology, <sup>2</sup>Division of Vascular Surgery and Endovascular Therapy, <sup>3</sup>Center for Exercise Science, University of Florida, Gainesville, FL. <sup>4</sup>Malcom Randall Veteran Affairs Medical Center, Gainesville, FL.
DOI: 10.6084/m9.figshare.27641580.v1
title: Measuring Spatiotemporal Accessibility and Equity of Emergency Medical Services in Shanghai， China

description: 中国上海紧急医疗服务的时空可及性和公平性测量
DOI: 10.6084/m9.figshare.6549059.v2
title: naive RTE and non-RTE CD4 T cells subsets

description: CDR3 subsets of RTE and non-RTE sorted naive CD4 T cells. Metadata includes information about all donors. Only beta chain.
DOI: 10.15468/dl.e48nbx
title: Occurrence Download

description: A dataset containing 11544 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.44_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Callicarpa americana L."
 ]
}

 The dataset includes 11544 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013328-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.1584665.v1
title: Hard Synonyms MySQL dump 8.1

description: Database dump containing words from 4 languages: English, Romanian, French and Spanish, and their translations.
DOI: 10.6084/m9.figshare.5117437.v1
title: Sorbus torminalis chorology

description: Distribution map of wild service tree (<i>Sorbus torminalis</i>)<br><br>These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geodatabases and scientific literature.<br>The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix “plg”), which define continuous areas of occupancy of the species, and with point features (name suffix “pnt”), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix “syn”).<br>All polygon borders delimiting the range are generalized across the mainland and sea boundaries, and not clipped to a specific coastline. This offers the possibility to mask sea areas, or to clip and extract the terrestrial range parts using GIS data layers of the users’ choice. <br><br>Please cite as:<br>Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007 <br><br>Additional information and used references are on 'supplementary materials' document:<br>https://doi.org/10.6084/m9.figshare.5091901<br><br>Chorological maps are part of the "European Atlas of Forest Tree Species" project:<br>https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.17632/jr3yv3wfhx
title: Dataset on Road and Traffic Obstacles

description: A comprehensive dataset titled "Dataset on Road and Traffic Obstacles," specifically focusing on various obstacles encountered on Indian roads. This dataset comprises a total of 38,295 images, meticulously categorized to aid in the development and testing of advanced machine learning models for road and traffic analysis.

The dataset includes diverse classes such as Animal on road, Auto, Crosswalk, Electric Bike, Random, Road, Road Obstacle, Road Sign, Road Traffic, Tractor, Traffic Sign, and Truck Tempo. Each class represents common elements and obstacles frequently observed on Indian roads, providing a rich and diverse collection for robust model training.
DOI: 10.6084/m9.figshare.14668494.v1
title: Measured data by the time-lens for 10 different pump powers

description: The measured double peaks by the time-lens are in wave1.mat up to wave10.mat. The power levels are in pump_power.mat
DOI: 10.6084/m9.figshare.16909330.v1
title: Raw leaf trait and spectral data

description: Across a growing season in 2017, we measured 21 leaf physiochemical traits, and also spectral reflectance of eight temperate broadleaf deciduous trees at Madingley wood (52°13′2.16″N, 0°2′55″E), and adjacent area on the outskirts of Cambridge in the UK.
DOI: 10.6084/m9.figshare.26089247.v1
title: HiGTS_2013s3

description: HiGTS is a high temporal resolution global gridded dataset of human thermal stress metrics. Derived using climate variables from ERA5-Land and ERA5, the HiGTS consists of hourly gridded maps of Universal Thermal Climate Index (UTCI), Universal Thermal Stress (UTS), and daily Thermal Stress Duration (TSD) at 0.1° × 0.1° spatial resolution over the global land surface.HiGTS_2013s3 contains the data from July 1, 2013 to September 30, 2013.
DOI: 10.6084/m9.figshare.28740205.v1
title: Supplementary materials 2 from Rise of the King: Gondwanan Origins and Evolution of Megaraptoran Dinosaurs

description: The datasets and code used in the analysis of the manuscript