cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12599131.v1
title: Additional file 2 of Nudge strategies to improve healthcare providers’ implementation of evidence-based guidelines, policies and practices: a systematic review of trials included within Cochrane systematic reviews

description: Additional file 2. Estimate effect estimates for dichotomous data used to generate results
DOI: 10.6084/m9.figshare.12599125
title: Additional file 1 of Nudge strategies to improve healthcare providers’ implementation of evidence-based guidelines, policies and practices: a systematic review of trials included within Cochrane systematic reviews

description: Additional file 1. Estimated effect estimates for continuous data used to generate results
DOI: 10.6084/m9.figshare.12599133.v1
title: Additional file 1 of Mycobacterial antigens in pleural fluid mononuclear cells to diagnose pleural tuberculosis in HIV co-infected patients

description: Additional file 1.
DOI: 10.6084/m9.figshare.12599125.v1
title: Additional file 1 of Nudge strategies to improve healthcare providers’ implementation of evidence-based guidelines, policies and practices: a systematic review of trials included within Cochrane systematic reviews

description: Additional file 1. Estimated effect estimates for continuous data used to generate results
DOI: 10.6084/m9.figshare.12598637
title: 3. SM

description: Data related to SCM and TPL
DOI: 10.6084/m9.figshare.12598637.v1
title: 3. Supplementary material.docx

description: Data related to SCM and TPL
DOI: 10.6084/m9.figshare.12598622
title: Fiber photometry of dopamine neurons during mouse auditory fear conditioning and extinction

description: This data is published in the paper: <br>Distinct signals in medial and lateral VTA dopamine neurons modulate fear extinction at different timesCai et al., eLife 2020<br>https://elifesciences.org/articles/54936<br><br>For the code that analyzes this data, and to reproduce figures seen in the paper, go to GitHub: https://github.com/neurocaience/DopamineAndFear<br><br>
DOI: 10.6084/m9.figshare.12598622.v2
title: Fiber photometry of dopamine neurons during mouse auditory fear conditioning and extinction

description: This data is published in the paper: <br>Distinct signals in medial and lateral VTA dopamine neurons modulate fear extinction at different timesCai et al., eLife 2020<br>https://elifesciences.org/articles/54936<br><br>For the code that analyzes this data, and to reproduce figures seen in the paper, go to GitHub: https://github.com/neurocaience/DopamineAndFear<br><br>
DOI: 10.6084/m9.figshare.12598553
title: Data for "Thickness Variations and Absence of Lateral Compositional Fluctuations in Aberration-Corrected STEM Images of InGaN LED Active Regions at Low Dose"

description: Data for Yankovich, A. B., Kvit, A. V., Li, X., Zhang, F., Avrutin, V., Liu, H., Izyumskaya, N., Özgür, U., Van Leer, B., Morkoç, H. & Voyles, P. M. Thickness Variations and Absence of Lateral Compositional Fluctuations in Aberration-Corrected STEM Images of InGaN LED Active Regions at Low Dose. Microsc. Microanal. 20, 864–8 (2014). DOI: 10.1017/S1431927614000427
DOI: 10.6084/m9.figshare.12598535
title: Data for "High-precision scanning transmission electron microscopy at coarse pixel sampling for reduced electron dose"

description: Data for Yankovich, A. B., Berkels, B., Dahmen, W., Binev, P. & Voyles, P. M. High-precision scanning transmission electron microscopy at coarse pixel sampling for reduced electron dose. Adv. Struct. Chem. Imaging 1, 2 (2015). DOI: 10.1186/s40679-015-0003-9
DOI: 10.6084/m9.figshare.12598535.v1
title: Data for "High-precision scanning transmission electron microscopy at coarse pixel sampling for reduced electron dose"

description: Data for Yankovich, A. B., Berkels, B., Dahmen, W., Binev, P. & Voyles, P. M. High-precision scanning transmission electron microscopy at coarse pixel sampling for reduced electron dose. Adv. Struct. Chem. Imaging 1, 2 (2015). DOI: 10.1186/s40679-015-0003-9
DOI: 10.6084/m9.figshare.12597938
title: Andrew_etal_Appendix_A_sup_data_200129.Rdata

description: Appendix A "Andrew_etal_Appendix_A_sup_data_200129" contains five data frames that can be loaded in R to run the code in Appendix B to reproduce results and figures in our Publication. These five data frames are described in Appendix B and C.
DOI: 10.6084/m9.figshare.12597920
title: OpenCASA v2.0 Test data

description: Data used to test the OpenCASA version 2.0. The files are related to Concentration, Accumulation and Functionality analysis.<br>
DOI: 10.6084/m9.figshare.12597938.v1
title: Andrew_etal_Appendix_A_sup_data_200129.Rdata

description: Appendix A "Andrew_etal_Appendix_A_sup_data_200129" contains five data frames that can be loaded in R to run the code in Appendix B to reproduce results and figures in our Publication. These five data frames are described in Appendix B and C.
DOI: 10.6084/m9.figshare.12597926.v1
title: The Detection of Continuing Current in Lightning using the Geostationary Lightning Mapper

description: `Figure2_video_efield_cc_durations.xlsx` contains the dataset consisting of 50 current durations estimated from high speed video and HAMMA electric field waveforms used to create Figure 2. Provided are the dates of each high speed video, CG stroke times in UTC, estimated luminosity duration from the high speed video in milliseconds, estimated current duration from the HAMMA waveform in milliseconds, and the approximate distance between the CG stroke and the closest HAMMA sensor available in kilometers. <br>`Section3_ic_leader_cg_stroke.xlsx` contains the 366 manually classified CG strokes and IC leaders used to train and test the logistic regression model. Provided are the CG stroke/IC leader dates, CG stroke/initial IC leader times in UTC, estimated current durations for CG strokes from the HAMMA waveform in milliseconds, and the manually classified flash type (where C = intracloud and G = cloud-to-ground).
DOI: 10.6084/m9.figshare.12597773
title: GL setup intake genomes processing dir script

description: GL setup intake genomes processing dir script<br>detailed on this page: https://hackmd.io/@astrobiomike/GL-genome-intake-processing<br>
DOI: 10.6084/m9.figshare.12597755
title: Mining Coronavirus (COVID-19) Posts in Social Media

description: A short description of the files: <br>- tweet_ids.txt.zip: Conatins the tweet ids mentioned in the paper. It contains 9 million tweets tweet id per line, published between Jan 27 and April 20, 2020, see the paper below for more details- bert-base-uncased-corona.zip: The pre-trained BERT model discussed in the paper. We used the pytorch implementation of BERT, available at huggingface Github.
DOI: 10.6084/m9.figshare.12597926.v2
title: Continuing Current Data

description: `Figure2_video_efield_cc_durations.xlsx` contains the dataset consisting of 50 current durations estimated from high speed video and HAMMA electric field waveforms used to create Figure 2. Provided are the dates of each high speed video, CG stroke times in UTC, estimated luminosity duration from the high speed video in milliseconds, estimated current duration from the HAMMA waveform in milliseconds, and the approximate distance between the CG stroke and the closest HAMMA sensor available in kilometers. <br>`Section3_ic_leader_cg_stroke.xlsx` contains the 366 manually classified CG strokes and IC leaders used to train and test the logistic regression model. Provided are the CG stroke/IC leader dates, CG stroke/initial IC leader times in UTC, estimated current durations for CG strokes from the HAMMA waveform in milliseconds, and the manually classified flash type (where C = intracloud and G = cloud-to-ground).
DOI: 10.6084/m9.figshare.12597590
title: Sycamore QAOA experimental data

description: This is the dataset of experimental quantum data from experiments described in "Quantum Approximate Optimization of Non-Planar Graph Problems on a Planar Superconducting Processor" (https://arxiv.org/abs/2004.04197)
DOI: 10.6084/m9.figshare.12597590.v1
title: Sycamore QAOA experimental data

description: This is the dataset of experimental quantum data from experiments described in "Quantum Approximate Optimization of Non-Planar Graph Problems on a Planar Superconducting Processor" (https://arxiv.org/abs/2004.04197)
DOI: 10.6084/m9.figshare.12597459
title: WOUND HEALING from Thermomagnetic resonance affects cancer growth and motility

description: dataset of wound healing experiments
DOI: 10.6084/m9.figshare.12597458
title: Smoliga - Active Consumption Rate R2 Tracked Changes from Modelling the maximal active consumption rate and its plasticity in humans—perspectives from hot dog eating competitions

description: Tracked-changes version of this revised manuscript
DOI: 10.6084/m9.figshare.12597459.v1
title: CELL SIZE from Thermomagnetic resonance affects cancer growth and motility

description: dataset of cellular and nuclear size
DOI: 10.6084/m9.figshare.12597459.v2
title: MITOCHONDRIAL ACTIVITY from Thermomagnetic resonance affects cancer growth and motility

description: dataset of real time PCR essay and mitochondrial membrane potential evaluation
DOI: 10.6084/m9.figshare.12597459.v4
title: WOUND HEALING from Thermomagnetic resonance affects cancer growth and motility

description: dataset of wound healing experiments
DOI: 10.6084/m9.figshare.12597459.v3
title: PROLIFERATION from Thermomagnetic resonance affects cancer growth and motility

description: dataset of proliferation essay
DOI: 10.6084/m9.figshare.12597323
title: Supplementary data for ‘Variation in Zoobenthic blue carbon in the Arctic's Barents Sea Shelf Sediments

description: Supplementary data file contains the raw data used for the manuscript "Variation in Zoobenthic blue carbon in the Arctic's Banrents Sea Shelf Sediments" and the data used to construct the figures within the manuscript
DOI: 10.6084/m9.figshare.12597323.v1
title: Supplementary data for ‘Variation in Zoobenthic blue carbon in the Arctic's Barents Sea Shelf Sediments

description: Supplementary data file contains the raw data used for the manuscript "Variation in Zoobenthic blue carbon in the Arctic's Banrents Sea Shelf Sediments" and the data used to construct the figures within the manuscript
DOI: 10.6084/m9.figshare.12597458.v5
title: Smoliga - Active Consumption Rate R2 Tracked Changes from Modelling the maximal active consumption rate and its plasticity in humans—perspectives from hot dog eating competitions

description: Tracked-changes version of this revised manuscript
DOI: 10.6084/m9.figshare.12597314
title: Anatomical Network Matrix.ods from The craniomandibular anatomy of the early archosauriform <i>Euparkeria capensis</i> and the dawn of the archosaur skull

description: Data matrix used for anatomical network analysis
DOI: 10.6084/m9.figshare.12597458.v4
title: Supplementary Material - Methods and Results R2 Track Changes from Modelling the maximal active consumption rate and its plasticity in humans—perspectives from hot dog eating competitions

description: A detailed description of methods and results beyond that included within the main manuscript, with changes tracked from previous version.
DOI: 10.6084/m9.figshare.12597312
title: Data S2 from Functional significance of graded properties of insect cuticle supported by an evolutionary analysis

description: ABAQUS .inp file. The file contains details of a representative optimal model.
DOI: 10.6084/m9.figshare.12597312.v1
title: Data S1 from Functional significance of graded properties of insect cuticle supported by an evolutionary analysis

description: Results of the GA. The excel file contains optimization objectives, optimization variables, and thickness of the layers of the optimal cuticles.
DOI: 10.6084/m9.figshare.12597314.v1
title: sookias_2016.nex from The craniomandibular anatomy of the early archosauriform <i>Euparkeria capensis</i> and the dawn of the archosaur skull

description: Matrix used for phylogenetic analysis (nexus)
DOI: 10.6084/m9.figshare.12597155
title: GL-snakemake-genomes-intake-processing

description: GL-snakemake-genomes-intake-processing<br>To go with details on this page: https://hackmd.io/@astrobiomike/GL-genome-intake-processing
DOI: 10.6084/m9.figshare.12597312.v4
title: Data S2 from Functional significance of graded properties of insect cuticle supported by an evolutionary analysis

description: ABAQUS .inp file. The file contains details of a representative optimal model.
DOI: 10.6084/m9.figshare.12597314.v5
title: Anatomical Network Matrix.ods from The craniomandibular anatomy of the early archosauriform <i>Euparkeria capensis</i> and the dawn of the archosaur skull

description: Data matrix used for anatomical network analysis
DOI: 10.25377/sussex.12597101
title: Data for research article 'Mushroom bodies are required for learnt visual navigation but not for innate visual behaviour in ants'

description: <b>Data for paper published in Current Biology (July 2020).</b><br> Data contains paths from individually recorded ants during the experiments (saved as Matlab files). You will need access to the MATLAB environment to view these files.<br>For details please see the README.doc file and view the experiment methods in the published paper.<br> <b>Abstract:</b>Visual navigation in ants has long been a focus of experimental study, but only recently have explicit hypotheses about the underlying neural circuitry been proposed. Indirect evidence suggests the mushroom bodies (MB) may be the substrate for visual memory in navigation tasks, whilst computational modelling shows that MB neural architecture could support this function. There is, however, no direct evidence that ants require MBs for visual navigation. Here we show that lesions of MB calyces impair ants’ visual navigation to a remembered food location yet leaves their innate responses to visual cues unaffected. Wood ants are innately attracted to large visual cues but we trained them to locate a food source at a specific angle away from such a cue. Subsequent lesioning of the MB calyces using procaine hydrochloride injection, caused ants to revert towards their innate cue attraction. Handling and saline injection control ants still approached the feeder. Path straightness of lesioned and control ants did not differ from each other but was lower than during training. Reversion towards the cue direction occurred irrespective of whether the visual cue was ipsi- or contralateral to the lesion site, showing this is not due simply to an induced motor bias. Monocular occlusion did not diminish ants’ ability to locate the feeder, suggesting that MB lesions are not merely interrupting visual input to the calyx. The demonstrated dissociation between innate and learnt visual responses provides direct evidence for a specific role of the MB in navigational memory.
DOI: 10.6084/m9.figshare.12597092
title: Share.zip

description: The data archive contains: 1) rates of acetylene production as a result of PAH dissociation and gas phase reactions; 2) Abundances of small hydrocarbons in photo-dissociation regions with inclusion of dissociation of PAHs and without it. Rates of acetylene production from PAHs are in files Orion-Bar-1/pahrates_orion_goi1.dat, Orion-Bar-2/pahrates_orion_goi2.dat, Horsehead/pahrates_horse.dat. Columns: number of a position point, time, rate in units [mol s^-1 1H atom]. Rates of acetylene production in gas phase chemical reactions in files Orion-Bar-1/X/form_dest_C2H2, where X is a position number and in analogous files for other objects/conditions. Abundances (and their change in time) of small hydrocarbons are in files Orion-Bar-1/X/results.dat (without inclusion of PAHs) and in Orion-Bar-1/X/PAH_term/results.dat (with PAHs), for other objects/conditions paths are similar.
DOI: 10.6084/m9.figshare.12597155.v1
title: GL Genome-intake-processing

description: GL Genome-intake-processing<br>To go with details on this page: https://hackmd.io/@astrobiomike/GL-genome-intake-processing
DOI: 10.6084/m9.figshare.12597155.v2
title: GL Genome-intake-processing

description: GL Genome-intake-processing<br>To go with details on this page: https://hackmd.io/@astrobiomike/GL-genome-intake-processing
DOI: 10.6084/m9.figshare.12597082
title: Datafile S6: from Higher temperatures lower rates of physiological and niche evolution

description: Alternative phylogeny used for squamates
DOI: 10.6084/m9.figshare.12597084
title: Table S7 from Brain microRNAs among social and solitary bees

description: Final miRNA sets for each species. Descriptions for each sheet and column header are provided in the ‘Metadata’ sheet.
DOI: 10.6084/m9.figshare.12597092.v3
title: Share.zip

description: The data archive contains: 1) rates of acetylene production as a result of PAH dissociation and gas phase reactions; 2) Abundances of small hydrocarbons in photo-dissociation regions with inclusion of dissociation of PAHs and without it. Rates of acetylene production from PAHs are in files Orion-Bar-1/pahrates_orion_goi1.dat, Orion-Bar-2/pahrates_orion_goi2.dat, Horsehead/pahrates_horse.dat. Columns: number of a position point, time, rate in units [mol s^-1 1H atom]. Rates of acetylene production in gas phase chemical reactions in files Orion-Bar-1/X/form_dest_C2H2, where X is a position number and in analogous files for other objects/conditions. Abundances (and their change in time) of small hydrocarbons are in files Orion-Bar-1/X/results.dat (without inclusion of PAHs) and in Orion-Bar-1/X/PAH_term/results.dat (with PAHs), for other objects/conditions paths are similar.
DOI: 10.6084/m9.figshare.12597081
title: Supplement 1: source files of paper2 from Analysis of the changing geometry of flexible structure: 2. Analysis of flexible solid

description: The zip file contains all the editable source files of paper2
DOI: 10.6084/m9.figshare.12597092.v2
title: Share.zip

description: The data archive contains: 1) rates of acetylene production as a result of PAH dissociation and gas phase reactions; 2) Abundances of small hydrocarbons in photo-dissociation regions with inclusion of dissociation of PAHs and without it. Rates of acetylene production from PAHs are in files Orion-Bar-1/pahrates_orion_goi1.dat, Orion-Bar-2/pahrates_orion_goi2.dat, Horsehead/pahrates_horse.dat. Columns: number of a position point, time, rate in units [mol s^-1 1H atom]. Rates of acetylene production in gas phase chemical reactions in files Orion-Bar-1/X/form_dest_C2H2, where X is a position number and in analogous files for other objects/conditions. Abundances of small hydrocarbons are in files Orion-Bar-1/X/result_0.out (without inclusion of PAHs) and in Orion-Bar-1/X/PAH_term/result_0.out (with PAHs), for other objects/conditions paths are similar.
DOI: 10.6084/m9.figshare.12597155.v3
title: GL Genome-intake-processing

description: GL Genome-intake-processing<br>To go with details on this page: https://hackmd.io/@astrobiomike/GL-genome-intake-processing
DOI: 10.6084/m9.figshare.12597081.v1
title: Supplement 1: source files of paper2 from Analysis of the changing geometry of flexible structure: 2. Analysis of flexible solid

description: The zip file contains all the editable source files of paper2
DOI: 10.6084/m9.figshare.12597155.v4
title: GL-snakemake-genomes-intake-processing

description: GL-snakemake-genomes-intake-processing<br>To go with details on this page: https://hackmd.io/@astrobiomike/GL-genome-intake-processing
DOI: 10.6084/m9.figshare.12597084.v2
title: Table S6 from Brain microRNAs among social and solitary bees

description: Results from genome scans for miRNA seed matches in Rfam. Descriptions for each sheet and column header are provided in the ‘Metadata’ sheet.
DOI: 10.6084/m9.figshare.12597082.v1
title: Datafile S4: from Higher temperatures lower rates of physiological and niche evolution

description: Phylogeny used for mammals
DOI: 10.6084/m9.figshare.12597084.v3
title: Table S5 from Brain microRNAs among social and solitary bees

description: Enrichment results for predicted targets of lineage-specific miRs and “social genes”. Includes gene lists, conversion lists based on reciprocal blastp results, and overlap test statistics. Column head descriptions are in ‘ColumnDetails’ sheet.
DOI: 10.6084/m9.figshare.12597155.v5
title: GL-snakemake-genomes-intake-processing

description: GL-snakemake-genomes-intake-processing<br>To go with details on this page: https://hackmd.io/@astrobiomike/GL-genome-intake-processing
DOI: 10.6084/m9.figshare.12597079.v1
title: Schmoll Proc B ESM ASReml Code_pin.txt from Sperm velocity in a promiscuous bird across experimental media of different viscosities

description: Electronic supplementary Tables and Figures;Representative video recordings of willow warbler Phylloscopus trochilus spermatozoa swimming in 0% cellulose;Representative video recordings of willow warbler Phylloscopus trochilus spermatozoa swimming in 1% cellulose;Representative video recordings of willow warbler Phylloscopus trochilus spermatozoa swimming in 2% cellulose;Data for Sperm velocity in a promiscuous bird across experimental media of different viscosities
DOI: 10.6084/m9.figshare.12595616.v1
title: Data associated with "Low-cost PVD shadow masks with sub-millimeter resolution from laser-cut paper"

description: This repository contains the raw images and data tables utilized in our paper. Please cite the original article (DOI 10.3390/mi11070676 )
DOI: 10.6084/m9.figshare.12597155.v6
title: GL-snakemake-genomes-intake-processing

description: GL-snakemake-genomes-intake-processing<br>To go with details on this page: https://hackmd.io/@astrobiomike/GL-genome-intake-processing
DOI: 10.6084/m9.figshare.12597079.v2
title: Schmoll Proc B ESM R Code.txt from Sperm velocity in a promiscuous bird across experimental media of different viscosities

description: In species with internal fertilization, the female genital tract appears challenging to sperm, possibly resulting from selection on for example ovarian fluid to control sperm behaviour and, ultimately, fertilization. Few studies, however, have examined the effects of swimming media viscosities on sperm performance. We quantified effects of media viscosities on sperm velocity in promiscuous willow warblers <i>Phylloscopus trochilus</i>. We used both a reaction norm and a character-state approach to model phenotypic plasticity of sperm behaviour across three experimental media of different viscosities. Compared to a standard medium (Dulbecco's Modified Eagle Medium, DMEM), media enriched with 1% or 2% w/v methyl cellulose decreased sperm velocity by up to about 50%. Spermatozoa from experimental ejaculates of different males responded similarly to different viscosities, and a lack of covariance between elevations and slopes of individual velocity-by-viscosity reaction norms indicated that spermatozoa from high- and low-velocity ejaculates were slowed down by a similar degree when confronted with high-viscosity environments. Positive cross-environment (1% versus 2% cellulose) covariances of sperm velocity under the character-state approach suggested that sperm performance represents a transitive trait, with rank order of individual ejaculates maintained when expressed against different environmental backgrounds. Importantly, however, a lack of significant covariances in sperm velocity involving a cellulose concentration of 0% indicated that pure DMEM represented a qualitatively different environment, questioning the validity of this widely used standard medium for assaying sperm performance. Enriching sperm environments along ecologically relevant gradients prior to assessing sperm performance will strengthen explanatory power of <i>in vitro</i> studies of sperm behaviour.
DOI: 10.6084/m9.figshare.12597155.v8
title: GL-snakemake-genomes-intake-processing

description: GL-snakemake-genomes-intake-processing<br>To go with details on this page: https://hackmd.io/@astrobiomike/GL-genome-intake-processing
DOI: 10.6084/m9.figshare.12597082.v4
title: Datafile S1: from Higher temperatures lower rates of physiological and niche evolution

description: Phylogeny used for amphibians
DOI: 10.6084/m9.figshare.12597155.v7
title: GL-snakemake-genomes-intake-processing

description: GL-snakemake-genomes-intake-processing<br>To go with details on this page: https://hackmd.io/@astrobiomike/GL-genome-intake-processing