cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25047509.v1
title: Data set for Wide-field Fourier magnetic imaging with electron spins in diamond：research data

description: Purpose of the datasetThis is an experimental dataset in support of the study titled "Wide-field Fourier magnetic imaging with electron spins in diamond". This is an experimental dataset to support the study entitled "Wide-field Fourier magnetic imaging with electron spins in diamond". For the images that appear in the article, the original experimental data can be obtained from this dataset. The data for each image is saved in a separate folder in .mat format, and the data analysis code is provided in the dataset in .m file format. To obtain the images in the article, the .m file can be opened with matlab software and run directly.AbstractWide-field magnetic imaging based on nitrogen-vacancy (NV) centers in diamond has been shown the applicability in material and biological science. However, the spatial resolution is limited by the optical diffraction limit (&gt;200 nm) due to the optical real-space localization and readout of NV centers. Here, we report the wide-field Fourier magnetic imaging technique to improve spatial resolution beyond the optical diffraction limit while maintaining the large field of view. Our method relies on widefield pulsed magnetic field gradient encoding of NV spins and Fourier transform under pixel-dependent spatial filters. We have improved spatial resolution by a factor of 20 compared to the optical resolution and demonstrated the wide-field super-resolution magnetic imaging of a gradient magnetic field. This technique paves a way for efficient magnetic imaging of large-scale fine structures at the nanoscale.
DOI: 10.6084/m9.figshare.28288001.v1
title: Figures data.xlsx

description: This article proposes a Joint Low Complexity Regularized Zero Forcing-Wavelet Domain Equalizer (JLCRLZF-WDE) as substitute to a Frequency Domain Equalizer (FDE) for improving the Multiple-Input-Multiple-Output (MIMO) DWT-OFDM. The results have been assessed using the Co-Carrier Frequency Offset (Co-CFO) Rayleigh fading channel.
DOI: 10.6084/m9.figshare.5124157.v1
title: Supplementary Material for: Critical Role of the Matricellular Protein SPARC in Mediating Erythroid Progenitor Cell Development in Zebrafish

description: Sparc (osteonectin) is a multifunctional matricellular glycoprotein expressed by many differentiated cells. Members of this family mediate cell-matrix interactions rather than acting as structural components of the extracellular matrix (ECM); therefore, they can influence many remodelling events, including haematopoiesis. We have investigated the role of <i>sparc</i> in embryonic haematopoiesis using a morpholino antisense oligonucleotide-based knockdown approach. Knockdown of <i>sparc</i> function resulted in specific erythroid progenitor cell differentiation defects that were highlighted by changes in gene expression and morphology, which could be rescued by injection of <i>sparc</i> mRNA. Furthermore, a comparison of blood phenotypes of <i>sparc</i> and <i>fgfs</i> knockdowns with similar defects and the <i>sparc</i> rescue of the<i> fgf21</i> blood phenotype places <i>sparc</i> downstream of <i>fgf21</i> in the genetic network regulating haematopoiesis in zebrafish. These results establish a role for an ECM protein (Sparc) as an important regulator of embryonic haematopoiesis during early development in zebrafish.
DOI: 10.6084/m9.figshare.12377066.v1
title: Supplementary Material for: Does the Presence of Significant Mitral Regurgitation prior to Transcatheter Aortic Valve Implantation for Aortic Stenosis Impact Mortality? – Meta-Analysis and Systematic Review

description: <b><i>Background:</i></b> Mitral regurgitation (MR) is commonly encountered in patients with severe aortic stenosis (AS). However, its independent impact on mortality in patients undergoing transcatheter aortic valve implantation (TAVI) has not been established. <b><i>Methods:</i></b> We performed a systematic search for studies reporting characteristics and outcome of patients with and without significant MR and/or adjusted mortality associated with MR post-TAVI. We conducted a meta-analysis of quantitative data. <b><i>Results:</i></b> Seventeen studies with 20,717 patients compared outcomes and group characteristics. Twenty-one studies with 32,257 patients reported adjusted odds of mortality associated with MR. Patients with MR were older, had a higher Society of Thoracic Surgeons score, lower left ventricular ejection fraction, a higher incidence of prior myocardial infarction, atrial fibrillation, and a trend towards higher NYHA class III/IV, but had similar mean gradient, gender, and chronic kidney disease. The MR patients had a higher unadjusted short-term (RR = 1.46, 95% CI 1.30–1.65) and long-term mortality (RR = 1.40, 95% CI 1.18–1.65). However, 16 of 21 studies with 27,777 patients found no association between MR and mortality after adjusting for baseline variables. In greater than half of the patients (0.56, 95% CI 0.45–0.66) MR improved by at least one grade following TAVI. <b><i>Conclusion:</i></b> The patients with MR undergoing TAVI have a higher burden of risk factors which can independently impact mortality. There is a lack of robust evidence supporting an increased mortality in MR patients, after adjusting for other compounding variables. MR tends to improve in the majority of patients post-TAVI.
DOI: 10.6084/m9.figshare.11717355.v1
title: Specialization for rapid excitation in fast squid tentacle muscle involves action potentials absent in slow arm muscle

description: Data are raw electrophysiological traces abtained in whole-cell patch recordings in voltage- and current-clamp mode. Format is Axon Binary File that must be read with Clampfit software available free on line. Metadata file is excel format.<br>
DOI: 10.6084/m9.figshare.15154612.v1
title: Table S1 from Land-use change and rodent-borne diseases: hazards on the shared socioeconomic pathways

description: Accuracy metric and sample size for all the rodent species analyzed
DOI: 10.6084/m9.figshare.28297436.v1
title: Risk of Bias and Quality Appraisal Based On Cosmın Risk of Bias Checklist, Updated Criteria For Good Measurement Properties..docx

description: <b>Assessment of cross-cultural adaptations and patient-reported outcome measures relevant to shoulder disorders in Turkish: A systematic review using the COSMIN methodology.</b>
DOI: 10.6084/m9.figshare.25234849.v1
title: msprime single population simulated dataset

description: The simulated data is generated using msprime for testing SMC++ under different sets of demographic models. We have generated ten different replicates with each demographic model. The README file within the folder contains the information about the demographic models.
DOI: 10.6084/m9.figshare.23214797.v1
title: Might student-centered principles affect active learning and its counterpart? An empirical study of Indonesian Curriculum Implementation

description: Education 4.0 emphasizes the use of hybrid approaches in the learning process. The use of peeragogy, heutagogy, and cybergogy may engage students in the learning processes in which active learning plays a key role. This study aimed to examine the effect of the implementation of the Merdeka Curriculum on active learning practices and their relationships with hybrid activities based on hybrid learning approaches, and active learning counterparts of (1) self-regulated learning: (2) self-directed learning, and (3) self-determined learning. These relationships will be examined in Indonesian curriculum implementation in which student-centered principles are emphasized. A cross-sectional survey was conducted by collecting responses of vocational high school students on survey. The digital questionnaire was sent to 600 Indonesian students, of whom 555 completed it. The relationships among the constructs were examined using a structural equation modelling. The results showed that a curriculum emphasizing student-centered principles was fully mediated by active learning and hybrid activities to promote student self-regulated learning (SRL), self-determined learning (SDET), and self-directed learning (SDL). Active learning and hybrid activities directly affect students’ SRL, SDET, and SDL, three counterparts of active learning that form important parts of long-life learning. This model indicates that Indonesian curriculum implementation may encourage active learning and indirectly increase learner engagement, autonomy, and metacognitive development.
DOI: 10.6084/m9.figshare.24771954.v1
title: <b>The atlas of brain glycosphingolipids revealed by selective enrichment and </b><b>lipidomic </b><b>profiling at multi-structural levels</b>

description: <b>The atlas of brain glycosphingolipids revealed by selective enrichment and </b><b>lipidomic </b><b>profiling at multi-structural levels</b>
DOI: 10.6084/m9.figshare.28886669.v3
title: Riemann Hypothesis

description: Formula capable of solving the Riemann hypothesis
DOI: 10.6084/m9.figshare.20505675.v2
title: Tables S2-3: PSGs Results

description: aBSREL Results for the stem and crown foreground schemes. (1) stem flatfishes, which aimed to detect genes responsible for the initial break of symmetry in the single branch leading to all extant flatfish species; and (2) crown flatfishes, which aimed to detect genes responsible for further adaptations experienced later in the flatfish radiation.
DOI: 10.6084/m9.figshare.23925468.v1
title: Supplementary Material for: The Effect of Gender on Identification and Interpretation of Non-Suicidal Self-Injury

description: Reported rates of non-suicidal self-injury (NSSI) differ by gender, but may be under-reported and under-recognised in men. People engaging in NSSI rarely seek professional help without encouragement, so others play a key role in its identification and potential intervention. The current research investigated others’ interpretations of NSSI, examining whether gender affects NSSI identification and views of how common and acceptable NSSI is. Method: Participants (N = 429; 74.1% female, 23.3% male; see below for further information) responded to two vignettes describing a person self-injuring by punching a wall, or by cutting themselves. The person’s gender in each vignette was manipulated. Participants then rated the level to which they agreed the behaviour was common and the level to which they agreed the behaviour was acceptable for the gender of the person described, on a 5-point Likert scale. Following both vignettes, participants were presented with a definition of NSSI, and rated the level to which they agreed cutting, and wall-punching, were forms of NSSI on 5-point Likert scales. Independent-samples t-tests and goodness of fit chi square tests were conducted as appropriate. Results: Participants were more likely to identify wall-punching as common for men, and cutting as common for women. However, there was no significant difference in whether wall-punching was identified as NSSI, or considered to be an acceptable behaviour, regardless of the gender of the person engaging in it. That is, although research suggests that men are far more likely to engage in wall-punching as a form of NSSI than women, participants did not recognise this. Overall, the results indicated a gender-dependent difference in how acceptable and common NSSI is thought to be, but no noticeable difference in identification NSSI. Wall-punching, typically a form of NSSI engaged in by males, tended not to be identified as such. Conclusion: There is an effect of gender on how NSSI is interpreted and it seems that men’s NSSI is, and will continue to be, under-recognised. This has important implications for the treatment of men’s NSSI, which is more likely to be seen as aggression and therefore deserving of punishment, than an attempt at emotion regulation.
DOI: 10.6084/m9.figshare.4873055.v1
title: Data for: What makes a reach movement effortful? – Physical effort discounting supports common minimization principles in decision making and motor control

description: Data for all figures and supporting information.
DOI: 10.6084/m9.figshare.6025238.v2
title: DEMETER2 data

description: Cancer cell line genetic dependencies estimated using the DEMETER2 model. DEMETER2 is applied to three large-scale RNAi screening datasets: the Broad Institute Project Achilles, Novartis Project DRIVE, and the Marcotte et al. breast cell line dataset. The model is also applied to generate a combined dataset of gene dependencies covering a total of 713 unique cancer cell lines. For more information visit https://depmap.org/R2-D2/. <br>Visit the Cancer Dependency Map portal at https://depmap.org to explore related datasets. Email questions to depmap@broadinstitute.org <br>This dataset includes gene dependencies estimated using the DEMETER2 model, the raw input datasets used to fit the models, as well as associated metadata. See Readme file for more details about the dataset contents and version history.
DOI: 10.6084/m9.figshare.13653512.v3
title: Additional Large Table 1: Relative Abundance of Enriched Vibrio Species HSP60

description: Relative Abundance of Enriched Vibrio Species HSP60<br>Additional file to manuscript: Temperature and salinity drive pathogenic vibrio distributions and associations with plankton microbiomes
DOI: 10.6084/m9.figshare.21895938.v1
title: Supplementary data and research materials for "The complex regional effects of macro-institutional change: Evidence from EU enlargement over three decades"

description: This folder contains study data and a variable list for the empirical analysis in:"The complex regional effects of macro-institutional change: Evidence from EU enlargement over three decades" by: Mitze, T., and Breidenbach, P.Current Version: March 8, 2024Published in: Review of World Economics, forthcoming
DOI: 10.6084/m9.figshare.647992.v1
title: CIL:34522

description: The video is a representative movie of bacteria incubated in DMEM with BSA for 3 h on top of an array of pilars of stiffness 500 pN/micron. The video is real time and shows the behavior of one or two bacteria for 23 s after 3 h of incubation. The video relates to CIL: 34521 and 34523, which show bacteria incubated in different media. The pilars are 3 micron apart center to center. The video is DIC microscopy with the focus on the top of the pilars. See the transient pulls and the fact that the two bacteria are not as tightly connected to the pillars in this media. This video corresponds to Video 3 from PLoS Biol. 2008 Apr 15;6(4):e87.
DOI: 10.6084/m9.figshare.21884778.v1
title: Supplementary Material for: Prevalence and Influencing Factors of Food Allergy in Global Context: A Meta-Analysis

description: <b><i>Introduction:</i></b> This study was conducted to evaluate the prevalence and influencing factors of food allergy (FA) in different regions and populations. <b><i>Methods:</i></b> The studies from January 2011 to December 2021 were searched through PubMed, Embase, Cochrane Library, and Web of Science databases. The prevalence of FA was evaluated by calculating the pooled effect estimates and their 95% confidence intervals (CIs). The odds ratio (OR) value was used to investigate the influencing factors of FA. Heterogeneity analysis among studies was performed using <i>I</i><sup>2</sup> analysis. Sensitivity analysis was performed to assess the stability of the results, and Begg’s test was used to assess publication bias. <b><i>Results:</i></b> A total of 105 published articles, including 3,318,608 participants, were involved in this study. The result indicated that the overall FA prevalence was 4.3% (95% CI: 0.038–0.047). The prevalence of FA was 4.2% in Asia (95% CI: 0.033–0.051), 3.2% in America (95% CI: 0.024–0.041), 4.8% in Europe (95% CI: 0.037–0.060), 1.6% in Africa (95% CI: 0.008–0.026), and 7.5% in Oceania (95% CI: 0.052–0.102). Milk (prevalence: 1.1%, 95% CI: 0.009–0.013) and egg (prevalence: 1.1%, 95% CI: 0.008–0.014) were the most common type of FAs. Male (OR: 1.289, 95% CI: 1.001–1.659), antibiotics exposure during pregnancy (OR: 1.221, 95% CI: 1.162–1.284), breastfeeding (OR: 1.349, 95% CI: 1.011–1.799), asthma (OR: 1.794, 95% CI: 1.443–2.230), eczema (OR: 5.121, 95% CI: 3.575–7.334), family history of atopic disease (OR: 1.893, 95% CI: 1.313–2.730), family history of FAs (OR: 2.096, 95% CI: 1.686–2.594), family history of atopic dermatitis (OR: 1.954, 95% CI: 1.645–2.322), family history of asthma (OR: 1.516, 95% CI: 1.370–1.678), and family history of allergic rhinitis/conjunctivitis (OR: 1.287, 95% CI: 1.191–1.392) increased the risk of FA. <b><i>Conclusion:</i></b> There were geographical differences in the prevalence of FA. Identification and nursing of FA high-risk populations should be strengthened to improve the quality of life.
DOI: 10.6084/m9.figshare.17104367.v1
title: Supplementary Material for: History of suicide attempts and COVID-19 infection in Veterans with schizophrenia or schizoaffective disorder: moderating effects of age and body mass index

description: Introduction: Relative to the general population, patients with schizophrenia or schizoaffective disorder have higher rates of suicide attempts and mortality from COVID-19 infection. Therefore, determining whether a history of suicide attempt is associated with COVID-19 in patients with schizophrenia or schizoaffective disorder has implications for COVID-19 vulnerability stratification in this patient population. Methods: We carried out cross-sectional analyses of electronic health records (EHR) of veterans with a diagnosis of schizophrenia or schizoaffective disorder that received treatment at any United States Veterans Affairs Medical Center between January 1, 2020 to January 31, 2021. We used logistic regression to estimate unadjusted and adjusted (including age, sex, race, marital status, body mass index (BMI), and a medical comorbidity score) odds ratios (ORs) for COVID-19 positivity in suicide attempters relative to non-attempters. Results: A total of 101,032 Veterans [mean age 56.67 ± 13.13 years; males 91,715 (90.8%)] were included in the analyses. There were 2,703 (2.7%) suicide attempters and 719 (0.7%) patients were positive for COVID-19. The association between history of suicide attempt and COVID-19 positivity was modified by age and BMI, such that the relationship was only significant in patients younger than 59 years, and in obese (BMI ≥ 30) patients (adjusted OR 3.42, 95% CI 2.02 - 5.79 and OR 2.85, 95% CI 1.65 - 4.94, respectively). Conclusions: Higher rates of COVID-19 in young or obese suicide attempters with a diagnosis of schizophrenia or schizoaffective disorder might be due to elevated risk for the infection in this sub-group of patients.
DOI: 10.6084/m9.figshare.18131482.v1
title: EEG raw dataset5

description: EEG raw dataset in brainvision format. Can be imported to EEGLAB. splitted into 7 subsets due to the limitation on upload size in figshare
DOI: 10.6084/m9.figshare.20207165.v1
title: Parents reported Vitamin D Supplementation among Children (Responses)

description: The purpose of this study was to review the vitamin D supplementation intake status among children in the general public, determine the vitamin D supplements practices, and the barriers that parents and children face with supplementation.
DOI: 10.6084/m9.figshare.27101782.v3
title: <b>The zero-carbon target for vehicle traffic in 2050: A pipe dream?</b>

description: To achieve the goal of limiting global warming to 1.5 °C, 2050 was declared the year of zero carbon. For global road traffic with passenger cars, the goal is to lower CO<sub>2</sub> emissions by 3,200,000 tons (3.2 Mt) annually. In this study, 30 countries were examined to see whether and how the zero-carbon target can be achieved by 2050 through the promotion of electric vehicles and/or the decarbonization of electricity generation. While an extrapolation of historical data only leads to the target in a few countries by 2050, a combination of replacing all combustion engines with electric drives and switching to CO<sub>2</sub>-free electricity could lead to zero-carbon traffic. However, this is contradicted by the enormous number of electric vehicles to be sold until 2050, which the market cannot absorb due to saturation tendencies. The limit to the growth of electric drives hampers limiting the detriment of the prior unlimited growth of carbon drives.
DOI: 10.6084/m9.figshare.17026739.v1
title: COVID-19 DTA Depression Data

description: The data file includes the filter to recreate the exclusion criteria for the Study. We also present the individual exclusion criteria below: · DTAfragmentattempts &gt; 5 · Progress &gt; 97 · DTAtasktime &lt; 3600 · Covidindex_3dayav &gt; 325 (i.e., those who took part on the day or after Boris Johnson’s announcement)
DOI: 10.6084/m9.figshare.28730864.v1
title: vessel_feature_extraction and result show

description: vessel feature extraction, km curve, dca curve, nomogram
DOI: 10.34740/kaggle/dsv/11634170
title: Iris_Data
DOI: 10.6084/m9.figshare.28703096.v1
title: Data

description: Effect of a health programme incorporating sutra-chanting on respiratory function, oral function, and mental well-being in older adults: A pilot study
DOI: 10.6084/m9.figshare.5128789.v1
title: Supplementary Material for: Endotoxin Tolerance Inhibits Lyn and c-Src Phosphorylation and Association with Toll-Like Receptor 4 but Increases Expression and Activity of Protein Phosphatases

description: Endotoxin tolerance protects the host by limiting excessive 'cytokine storm' during sepsis, but compromises the ability to counteract infections in septic shock survivors. It reprograms Toll-like receptor (TLR) 4 responses by attenuating the expression of proinflammatory cytokines without suppressing anti-inflammatory and antimicrobial mediators, but the mechanisms of reprogramming remain unclear. In this study, we demonstrate that the induction of endotoxin tolerance in human monocytes, THP-1 and MonoMac-6 cells inhibited lipopolysaccharide (LPS)-mediated phosphorylation of Lyn, c-Src and their recruitment to TLR4, but increased total protein phosphatase (PP) activity and the expression of protein tyrosine phosphatase (PTP) 1B, PP2A, PTP nonreceptor type (PTPN) 22 and mitogen-activated protein kinase phosphatase (MKP)-1. Chemical PP inhibitors, okadaic acid, dephostatin and cantharidic acid markedly decreased or completely abolished LPS tolerance, indicating the importance of phosphatases in endotoxin tolerization. Overexpression of PTPN22 decreased LPS-mediated nuclear factor (NF)-κB activation, p38 phosphorylation and CXCL8 gene expression, while PTPN22 ablation upregulated LPS-induced p65 NF-κB and p38 phosphorylation and the expression of TNF-a and pro-IL-1ß mRNA, indicating PTPN22 as an inhibitor of TLR4 signaling. Thus, LPS tolerance interferes with TLR4 signaling by inhibiting Lyn and c-Src phosphorylation and their recruitment to TLR4, while increasing the phosphatase activity and expression of PP2A, PTPN22, PTP1B and MKP1.
DOI: 10.6084/m9.figshare.28782407.v1
title: <b>Supplementary data for "HIGH-THROUGHPUT PROTEOMICS AND IMMUNOHISTOCHEMISTRY OF ORBITAL CONNECTIVE TISSUE IN </b><b>GRAVES' ORBITOPATHY"</b>

description: This dataset contains the supplementary materials for the manuscript entitled “HIGH-THROUGHPUT PROTEOMICS AND IMMUNOHISTOCHEMISTRY OF ORBITAL CONNECTIVE TISSUE IN GRAVES' ORBITOPATHY,” submitted to The Journal of Clinical Endocrinology & Metabolism (JCEM). Supplementary Table S1 provides detailed settings used in MaxQuant for protein identification and label-free quantification (LFQ).Supplementary Table S2 summarizes the LFQ-based quantitative proteomics results, including protein identifiers, peptide counts, LFQ intensities across samples, average expression values, fold changes, and statistical significance (t-test p values) between comparison groups.