cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25442/hku.25902847.v1
title: Supporting data for "EXPLORING THE ROLE OF SIGNALING SECONDARY METABOLITES IN BACTERIAL COMMUNICATIONS".

description: Throughout their lifespan, bacteria generate diverse natural products postulated to serve as chemical signal mediators and defensive weaponry. However, although enormous natural products have been identified, elucidating their ecological functions, such as antibacterial, antifungal, and quorum sensing (QS) induction properties, remains limited.In this study, the focus lies on the exploration of novel molecules that function as QS autoinducers or QS inhibitors. Chapter 1 comprehensively reviews the latest advancements in QS autoinducers and inhibitors. Several major families of QS autoinducers are discussed, including N-acyl-homoserine lactones (AHL), autoinducer-2 (AI-2), RRNPP peptides, autoinducing peptides (AIP), and N-heterocycles. Additionally, the principles, examples, and screening models of QS inhibitors are introduced.Following the review, Chapter 2 delves deeper into the study of N-heterocycles due to their potential to function as both QS autoinducers and QS inhibitors. Given the biosynthetic diversity of N-heterocycles, their corresponding biosynthetic enzymes are examined, with the enzyme family CAR being selected for its untapped biosynthetic potential and prevalence. Through natural product discovery, it was initially determined that CAR-encoded N-heterocycles from Bacillota act as QS inhibitors rather than QS autoinducers. Further enzyme characterization and in vitro product reconstruction revealed that a single CAR enzyme can produce hundreds of N-heterocycles, with a series of pyrazine molecules being identified as QS inhibitors. Considering the widespread occurrence of N-heterocycles, particularly pyrazine molecules, this study provides novel insights into the ecological functions of these ubiquitous molecules.Chapter 3 details the identification of a novel group of AIPs, which belong to QS autoinducers, derived from the <i>Paenibacillus</i> genus. The discovery of Pp-AIPs was led by a bioactivity-guided search, which provided an opportunity to uncover AIPs with unique biosynthetic features and structures compared to previously known examples. Notably, these AIPs represent the first instance of regulating secondary metabolite production. Consequently, they offer a novel mode of communication with host plants, as the AIPs may assist <i>Paenibacillus</i> in shaping the root microbiome. This study broadens the diversity of AIPs and emphasizes their ecological significance in intricate environmental contexts.In summary, this study establishes novel links between natural products and QS processes. The findings hold significant potential for guiding and inspiring future research in this area.
DOI: 10.15468/dl.2vqtk6
title: Occurrence Download

description: A dataset containing 1529836315 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1529836315 records from 26094 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126670-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id402339.1
title: StrainInfo SI-ID 402339.1

description: StrainInfo dataset 402339 about a strain of Paenibacillus beijingensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402166.1
title: StrainInfo SI-ID 402166.1

description: StrainInfo dataset 402166 about a strain of Chelativorans intermedius. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402167.1
title: StrainInfo SI-ID 402167.1

description: StrainInfo dataset 402167 about a strain of Syntrophorhabdus aromaticivorans. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402168.1
title: StrainInfo SI-ID 402168.1

description: StrainInfo dataset 402168 about a strain of Xanthomonas. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402169.1
title: StrainInfo SI-ID 402169.1

description: StrainInfo dataset 402169 about a strain of Bacillus cereus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402266.1
title: StrainInfo SI-ID 402266.1

description: StrainInfo dataset 402266 about a strain of Corynebacterium trachiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402267.1
title: StrainInfo SI-ID 402267.1

description: StrainInfo dataset 402267 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402268.1
title: StrainInfo SI-ID 402268.1

description: StrainInfo dataset 402268 about a strain of Bacillus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402269.1
title: StrainInfo SI-ID 402269.1

description: StrainInfo dataset 402269 about a strain of Paenibacillus xylanivorans. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402340.1
title: StrainInfo SI-ID 402340.1

description: StrainInfo dataset 402340 about a strain of Polynucleobacter tropicus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402341.1
title: StrainInfo SI-ID 402341.1

description: StrainInfo dataset 402341 about a strain of Pseudoalteromonas gelatinilytica. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402342.1
title: StrainInfo SI-ID 402342.1

description: StrainInfo dataset 402342 about a strain of Thermococcus cleftensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402343.1
title: StrainInfo SI-ID 402343.1

description: StrainInfo dataset 402343 about a strain of Actinokineospora fastidiosa. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402170.1
title: StrainInfo SI-ID 402170.1

description: StrainInfo dataset 402170 about a strain of Pseudomonas. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402171.1
title: StrainInfo SI-ID 402171.1

description: StrainInfo dataset 402171 about a strain of Streptococcus orisasini. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402172.1
title: StrainInfo SI-ID 402172.1

description: StrainInfo dataset 402172 about a strain of Penicillium griseofulvum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402173.1
title: StrainInfo SI-ID 402173.1

description: StrainInfo dataset 402173 about a strain of Myroides odoratimimus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402270.1
title: StrainInfo SI-ID 402270.1

description: StrainInfo dataset 402270 about a strain of Klebsiella pneumoniae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402271.1
title: StrainInfo SI-ID 402271.1

description: StrainInfo dataset 402271 about a strain of Hoeflea phototrophica. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402272.1
title: StrainInfo SI-ID 402272.1

description: StrainInfo dataset 402272 about a strain of Williamwhitmania taraxaci. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402273.1
title: StrainInfo SI-ID 402273.1

description: StrainInfo dataset 402273 about a strain of Micromonospora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402344.1
title: StrainInfo SI-ID 402344.1

description: StrainInfo dataset 402344 about a strain of Staphylococcus aureus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.rpjus7
title: Occurrence Download

description: A dataset containing 6968993 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Human Observation"
 ]
 },
 "Year 2014-2018",
 "HasCoordinate is true",
 "TaxonKey is Paridae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6968993 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010538-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id402345.1
title: StrainInfo SI-ID 402345.1

description: StrainInfo dataset 402345 about a strain of Arthroderma crocatum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402346.1
title: StrainInfo SI-ID 402346.1

description: StrainInfo dataset 402346 about a strain of Sporolactobacillus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402174.1
title: StrainInfo SI-ID 402174.1

description: StrainInfo dataset 402174 about a strain of Mycobacterium franklinii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402175.1
title: StrainInfo SI-ID 402175.1

description: StrainInfo dataset 402175 about a strain of Herbinix luporum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402176.1
title: StrainInfo SI-ID 402176.1

description: StrainInfo dataset 402176 about a strain of Staphylococcus haemolyticus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402274.1
title: StrainInfo SI-ID 402274.1

description: StrainInfo dataset 402274 about a strain of Deinococcus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/itqrx6
title: Himenópteros Parasíticos en México (UANL)

description: La Colección de Himenópteros Parasíticos contiene información de 34 familias entre las que se pueden citar a Aphelinidae, Braconidae, Chalcididae, Diapriidae, Encyrtidae, Eulophidae, Ichneumonidae, Pteromalidae de México. La base de datos incluye 10 898 ejemplares correspondientes a 34 familias, 2 062 géneros, 1 782 especies y pertenece al SNIB.
DOI: 10.60712/si-id402275.1
title: StrainInfo SI-ID 402275.1

description: StrainInfo dataset 402275 about a strain of Sulfurimicrobium lacus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.ldu7j5
title: Occurrence Download

description: A dataset containing 208 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Perdicula erythrorhyncha (Sykes, 1832)",
 "TaxonKey is Perdicula erythrorhyncha blewitti (Hume, 1874)",
 "TaxonKey is Perdicula erythrorhyncha erythrorhyncha"
 ]
}

 The dataset includes 208 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002930-170925132151566/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id402276.1
title: StrainInfo SI-ID 402276.1

description: StrainInfo dataset 402276 about a strain of Cucumibacter marinus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/vdcegr
title: Données espèces - Expertise IPE Bailleau 2009

description: IPE Bailleau 2009 / IPE Bailleau 2009
DOI: 10.60712/si-id402347.1
title: StrainInfo SI-ID 402347.1

description: StrainInfo dataset 402347 about a strain of Polynucleobacter aenigmaticus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402348.1
title: StrainInfo SI-ID 402348.1

description: StrainInfo dataset 402348 about a strain of Pseudomonas aeruginosa. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402349.1
title: StrainInfo SI-ID 402349.1

description: StrainInfo dataset 402349 about a strain of Fibrobacter intestinalis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402350.1
title: StrainInfo SI-ID 402350.1

description: StrainInfo dataset 402350 about a strain of Myroides odoratimimus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402177.1
title: StrainInfo SI-ID 402177.1

description: StrainInfo dataset 402177 about a strain of Hyphomicrobium zavarzinii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.9yokk9
title: Occurrence Download

description: A dataset containing 109 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Telespiza ultima Bryan, 1917"
 ]
}

 The dataset includes 109 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000272-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id402178.1
title: StrainInfo SI-ID 402178.1

description: StrainInfo dataset 402178 about a strain of Risungbinella massiliensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402179.1
title: StrainInfo SI-ID 402179.1

description: StrainInfo dataset 402179 about a strain of Campylobacter jejuni. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402180.1
title: StrainInfo SI-ID 402180.1

description: StrainInfo dataset 402180 about a strain of Dyadobacter endophyticus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402277.1
title: StrainInfo SI-ID 402277.1

description: StrainInfo dataset 402277 about a strain of Calycomorphotria hydatis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.8zg36x
title: Occurrence Download

description: A dataset containing 205 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Gallicolumba stairi (G.R.Gray, 1856)",
 "TaxonKey is Gallicolumba stairi subsp. stairi",
 "TaxonKey is Gallicolumba stairi subsp. vitiensis"
 ]
}

 The dataset includes 205 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001951-170925132151566/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.toku5y
title: Occurrence Download

description: A dataset containing 1727 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Urocissa caerulea Gould, 1863"
 ]
}

 The dataset includes 1727 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000340-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id402278.1
title: StrainInfo SI-ID 402278.1

description: StrainInfo dataset 402278 about a strain of Paraperlucidibaca wandonensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402279.1
title: StrainInfo SI-ID 402279.1

description: StrainInfo dataset 402279 about a strain of Clostridium perfringens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402280.1
title: StrainInfo SI-ID 402280.1

description: StrainInfo dataset 402280 about a strain of Sporobolomyces koalae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402281.1
title: StrainInfo SI-ID 402281.1

description: StrainInfo dataset 402281 about a strain of Arthrobacter silvisoli. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402351.1
title: StrainInfo SI-ID 402351.1

description: StrainInfo dataset 402351 about a strain of Lutibacter oricola. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.me95cz
title: Occurrence Download

description: A dataset containing 761 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sedum lineare C.P.Thunberg ex A.Murray, Sedum lineare Pau, Sedum lineare Thunb., Sedum lineare var. albomarginatum Makino, Sedum lineare var. albomarginatum Makino ex Megata, Sedum lineare var. floribundum Miq., Sedum lineare f. variegatum Praeger, Sedum lineare var. contractum Miq., Sedum lineare var. robustum Praeger, Sedum lineare var. minus Miq.)"
 ]
}

 The dataset includes 761 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086310-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id402352.1
title: StrainInfo SI-ID 402352.1

description: StrainInfo dataset 402352 about a strain of Micrococcus luteus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id402353.1
title: StrainInfo SI-ID 402353.1

description: StrainInfo dataset 402353 about a strain of Zymomonas mobilis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.