cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3491403
title: Anammox bacteria originally used nitric oxide as electron accepter

description: <strong>Anaerobic ammonium oxidation (anammox) bacteria has been known to oxidize ammonium with nitrite as the terminal electron acceptor. Recently, however, nitric oxide (NO)-dependent anammox has been shown in <em>Candidatus</em> (<em>Ca.</em>) Kuenenia stuttgartiensis with first complete genome and it is hypothesized that NO-dependent anammox bacteria existed on early Earth. Here we report second complete genome of anammox bacteria, <em>Ca.</em> Brocadia pituitae, from metagenome of anammox bacterial community (ABC). Comparative genomics of <em>B. pituitae</em>, <em>K. stuttgartiensis</em> and 6 other anammox bacteria with nearly complete genomes revealed that their core genome structure comprises syntenic 1,152 orthologous groups. Both copper-containing (NirK) and <em>cd</em><sub>1</sub> (NirS) nitrite reductases which are absent in <em>B. pitutitae</em> were not included in the core although <em>Ca.</em> Brocadia sp. UTMX2 and <em>Ca.</em> B. caroliniensis possess <em>nirK</em> gene. Indeed, IS element is inserted adjacent to the <em>nirK</em> gene in <em>Ca.</em> Jettenia caeni genome and also phylogenetic analysis revealed that the origin of nitrite reductases is derived from multiple lineages. Thus, it is clear that the <em>nirK</em> and <em>nirS </em>genes<em> </em>of anammox bacteria within family <em>Brocadiaceae</em> were acquired by horizontal gene transfer. ABC fed with nitrite and ammonium shows anammox activity but it disappears when the biomass granules are dispersed by agitation. Also, because ABC can oxidize ammonium with NO like <em>K. stuttgartiensis</em>, other nitrite reductase holders in ABC are deemed to supply NO to <em>B. pituitae</em>. Our results support the previous hypothesis that anammox bacteria originally used NO as electron accepter.</strong>
DOI: 10.6084/m9.figshare.17695643.v3
title: Phylogeny Files

description: Sequence, alignment and tree files used for the construction of the Species Trees (Validation tree and Final Species Tree represented in Fig.1) and individual protein Trees presented in "The genetic repertoire and regulation of sucrose assimilation in the fructophilic Wickerhamiella/Starmerella yeast clade hint at adaptive diversification".
DOI: 10.6084/m9.figshare.15062550
title: Predicted wind and solar energy expansion has minimal overlap with multiple conservation priorities across global regions

description: Protected areas and renewable energy generation are critical tools to combat biodiversity loss and climate change, respectively. Over the coming decades, expansion of the protected area network to meet conservation objectives will be occurring alongside rapid deployment of renewable energy infrastructure to meet climate targets, driving potential conflict for a finite land resource. Renewable energy infrastructure can have negative effects on wildlife, and co-occurrence may mean emissions targets are met at the expense of conservation objectives. Here, we assess current and projected overlaps of wind and solar photovoltaic installations and important conservation areas across nine global regions using spatially explicit wind and solar data and methods for predicting future renewable expansion. We show similar levels of co-occurrence as previous studies but demonstrate that once area is accounted for, previous concerns about overlaps in the Northern Hemisphere may be largely unfounded, although they are high in some biodiverse countries (e.g., Brazil). Future projections of overlap between the two land uses presented here are generally dependent on priority threshold and region and suggest the risk of future conflict can be low. We use the best available data on protected area degradation to corroborate this level of risk. Together, our findings indicate that while conflicts between renewables and protected areas inevitably do occur, renewables represent an important option for decarbonization of the energy sector that would not significantly affect area-based conservation targets if deployed with appropriate policy and regulatory controls.<br>
DOI: 10.6084/m9.figshare.17695643.v4
title: Contrasting strategies for sucrose utilization in a floral yeast clade_Supplemental_Material

description: Sequence, alignment and tree files used for the construction of the Species Trees (Validation tree and Final Species Tree represented in Fig.1) and individual protein Trees presented in "Contrasting strategies for sucrose utilization in a floral yeast clade".
DOI: 10.3886/e159701
title: Community Centered Learning

description: This research aims to study hurricane preparedness awareness of people living in a hurricane-prone coastal community.
DOI: 10.3886/e159701v1
title: Community Centered Learning

description: This research aims to study hurricane preparedness awareness of people living in a hurricane-prone coastal community.
DOI: 10.6073/pasta/6b5a895756973d23e40881f8459d23f0
title: Hubbard Brook Experimental Forest USGS 40ft Contours: GIS Shapefile

description: USGS 7.5' Topographic Quadrangles; Mount Kineo, NH - 1973, Woodstock, NH 1980. Contours at 40ft intervals were manually digitized. Data distributed as shapefile in Coordinate system EPSG:26919 - NAD83 / UTM zone 19N
DOI: 10.5281/zenodo.5860575
title: Pteroeides caledonicum decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860574
title: Pteroeides caledonicum decontaminated FSCR

description: .
DOI: 10.6084/m9.figshare.17977388
title: single cell protein expression matrix

description: Single cell protein expression extracted from segmented IMC image
DOI: 10.6084/m9.figshare.17977388.v1
title: single cell protein expression matrix

description: Single cell protein expression extracted from segmented IMC image
DOI: 10.6084/m9.figshare.18025325
title: data

description: Input data for reproduce results in paper "Multiplexed imaging mass cytometry reveals distinct tumor-immune microenvironments l inked to immunotherapy responses in melanoma"
DOI: 10.6073/pasta/c29b9aedf9bfb5b98c0e5a53adc14b46
title: Hubbard Brook Experimental Forest 10ft contours: GIS Shapefile

description: Diazo copy of Hubbard Brook Watershed Map generated stereophoto- grammetrically based on May, 1956 aerial photography. Shows New Hampshire state plane coordinate system reference points which were projected into UTM Zone 19 and used as reference tics. The contour lines were manually digitized from the map. Data distributed as shapefile in Coordinate system EPSG:26919 - NAD83 / UTM zone 19N
DOI: 10.6084/m9.figshare.14061860
title: Data produced in Putnam and Palucis (2021)

description: Three types of datasets are maintained in this repository. This information is also contained in a ReadMe textfile as well.<br>1. Crater_count_data.xlsx: We performed crater counts on portions of the ejecta of Garu crater to determine its approximate impact age. We limited the count to the southern half of the ejecta blanket because Garu lies directly on the Martian crustal dichotomy, and the northern portion of Garu’s ejecta is located over the dichotomy scarp. This partial portion of the ejecta covers a fairly large area (&gt; 1400 km<sup>2</sup>) and contains 43 craters &gt;500 m in diameter to ensure statistically robust surface ages (Palucis et al., 2020; Warner et al., 2015). We mapped craters on the CTX basemap in ArcGIS using the CraterTools software (Kneissl et al., 2011). Craters were included only if their centers were within the mapped ejecta. We extracted crater areas and converted them into crater diameters in ArcGIS. We input crater size-frequency data into CraterStats II (Michael & Neukum, 2010) and determined a surface age from crater diameter bins &gt;500 m using the Hartmann (2005) chronology and production functions with root-2 binning. When comparing ages between Garu and Gale crater, we report both the observed crater population (e.g., N(1 km)) and the model absolute age, as different approaches can make the latter difficult to compare between studies.<br>2. Shapefiles_Garu_JGR: We produced a geomorphic map using a blended CTX mosaic (5 m/pixel, Dickson et al., 2018), with georeferenced High-Resolution Imaging Science Experiment (HiRISE, ~25 cm/pixel) imagery overlain where available (McEwen et al., 2007). We also used the global Thermal Emission Imaging System (THEMIS, ~100 m/pixel) map (Christensen et al., 2004) to identify the thermal inertia and induration of various mapped geomorphic units within Garu crater and its surroundings.<br>3. DEMS.zip: We produced Context Camera (CTX) (Malin et al., 2007) DEMs for the entirety of the Garu sedimentary deposit and its upslope canyon using the open-source NASA Ames Stereo Pipeline software (Moratto et al., 2010). CTX stereopairs were processed to produce initial point clouds that were then tied to Mars Orbital Laser Altimeter (MOLA) point shot data (Beyer et al., 2018; Smith et al., 2001). The MOLA-tied point clouds were then used to make DEMs registered to the Mars aeroid (3,396,190 m) with ~5 m/pixel spatial resolution and an elevation uncertainty of ~24 m.
DOI: 10.6084/m9.figshare.14061860.v1
title: Data produced in Putnam and Palucis (2021)

description: Three types of datasets are maintained in this repository. This information is also contained in a ReadMe textfile as well.<br>1. Crater_count_data.xlsx: We performed crater counts on portions of the ejecta of Garu crater to determine its approximate impact age. We limited the count to the southern half of the ejecta blanket because Garu lies directly on the Martian crustal dichotomy, and the northern portion of Garu’s ejecta is located over the dichotomy scarp. This partial portion of the ejecta covers a fairly large area (&gt; 1400 km<sup>2</sup>) and contains 43 craters &gt;500 m in diameter to ensure statistically robust surface ages (Palucis et al., 2020; Warner et al., 2015). We mapped craters on the CTX basemap in ArcGIS using the CraterTools software (Kneissl et al., 2011). Craters were included only if their centers were within the mapped ejecta. We extracted crater areas and converted them into crater diameters in ArcGIS. We input crater size-frequency data into CraterStats II (Michael & Neukum, 2010) and determined a surface age from crater diameter bins &gt;500 m using the Hartmann (2005) chronology and production functions with root-2 binning. When comparing ages between Garu and Gale crater, we report both the observed crater population (e.g., N(1 km)) and the model absolute age, as different approaches can make the latter difficult to compare between studies.<br>2. Shapefiles_Garu_JGR: We produced a geomorphic map using a blended CTX mosaic (5 m/pixel, Dickson et al., 2018), with georeferenced High-Resolution Imaging Science Experiment (HiRISE, ~25 cm/pixel) imagery overlain where available (McEwen et al., 2007). We also used the global Thermal Emission Imaging System (THEMIS, ~100 m/pixel) map (Christensen et al., 2004) to identify the thermal inertia and induration of various mapped geomorphic units within Garu crater and its surroundings.<br>3. DEMS.zip: We produced Context Camera (CTX) (Malin et al., 2007) DEMs for the entirety of the Garu sedimentary deposit and its upslope canyon using the open-source NASA Ames Stereo Pipeline software (Moratto et al., 2010). CTX stereopairs were processed to produce initial point clouds that were then tied to Mars Orbital Laser Altimeter (MOLA) point shot data (Beyer et al., 2018; Smith et al., 2001). The MOLA-tied point clouds were then used to make DEMs registered to the Mars aeroid (3,396,190 m) with ~5 m/pixel spatial resolution and an elevation uncertainty of ~24 m.
DOI: 10.5281/zenodo.5860564
title: Psittacara wagleri decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860563
title: Psittacara wagleri decontaminated FSCR

description: .
DOI: 10.25952/f9ey-kn49
title: Meta-Analysis of Associations Between Five-Factor Personality Traits and Social Media Addiction

description: This is a data file used in a meta-analysis. This meta-analysis quantified the relationship between the five-factor model of personality and social media addiction and identified moderators of this relationship. The analysis included 32 studies and 34 independent samples, with a total of 19,668 participants. The meta-analysis found that high neuroticism (r = .19, p < .001), low conscientiousness (r = -.13, p < .001), low agreeableness (r = -.05, p = .03), and low openness (r = -.06, p = .02) were significantly associated with social media addiction. Several significant moderator effects were found involving age and sex, with females and younger individuals generally showing stronger associations between certain personality traits and social media addiction. The meta-analysis contributes to the understanding of the relationship between individual characteristics and social media addiction and provides information that might be useful in preventing and treating this addictive behaviour.
description: This is a data file used in a meta-analysis. This meta-analysis quantified the relationship between the five-factor model of personality and social media addiction and identified moderators of this relationship. The analysis included 32 studies and 34 independent samples, with a total of 19,668 participants. The meta-analysis found that high neuroticism (r = .19, p < .001), low conscientiousness (r = -.13, p < .001), low agreeableness (r = -.05, p = .03), and low openness (r = -.06, p = .02) were significantly associated with social media addiction. Several significant moderator effects were found involving age and sex, with females and younger individuals generally showing stronger associations between certain personality traits and social media addiction. The meta-analysis contributes to the understanding of the relationship between individual characteristics and social media addiction and provides information that might be useful in preventing and treating this addictive behaviour.
DOI: 10.5281/zenodo.5855060
title: La Soufriere volcanic eruptions launched gravity waves into Space

description: The GNSS filtered TEC observations with bandpass filtering of 10-30 min for the study of "<strong>La Soufriere volcanic eruptions launched gravity waves into Space" </strong>by Yue et al.
DOI: 10.5281/zenodo.5855059
title: La Soufriere volcanic eruptions launched gravity waves into Space

description: The GNSS filtered TEC observations with bandpass filtering of 10-30 min for the study of "<strong>La Soufriere volcanic eruptions launched gravity waves into Space" </strong>by Yue et al.
DOI: 10.5281/zenodo.5860587
title: Pyrrhura hoematotis decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860586
title: Pyrrhura hoematotis decontaminated FSCR

description: .
DOI: 10.6084/m9.figshare.15188016
title: Dataset of RNAseq, TCR and ctDNA

description: This dataset includes gene expression matrix by TPM normalization, TCR clonality and ctDNA mTBI.
DOI: 10.6084/m9.figshare.15188016.v1
title: Dataset of RNAseq, TCR and ctDNA

description: This dataset includes gene expression matrix by TPM normalization, TCR clonality and ctDNA mTBI.
DOI: 10.25440/smu.18462074
title: The facets of meaningful experiences: An examination of purpose and coherence in meaningful and meaningless events

description: Research on meaning has begun to assess the specific facets of meaning in life. Few studies have examined the extent to which these facets distinguish meaning at the level of individual events. In the present study, participants from Singapore and the U.S. wrote about meaningful and meaningless events and rated the extent to which they experienced purpose, coherence, positive and negative implications for self and others, positive affect, and negative affect. In both samples, meaningful and meaningless events differed most in their levels of positive affect, purpose, and positive implications for the self. When entered as predictors of overall event meaningfulness, purpose and positive affect independently predicted meaning. Measures of coherence did not predict the meaningfulness of event with one exception. The extent to which an event offered a new understanding predicted meaning above and beyond purpose and PA. Implications for meaning assessment and theories of meaning are discussed.
DOI: 10.25440/smu.18462074.v1
title: The facets of meaningful experiences: An examination of purpose and coherence in meaningful and meaningless events

description: Research on meaning has begun to assess the specific facets of meaning in life. Few studies have examined the extent to which these facets distinguish meaning at the level of individual events. In the present study, participants from Singapore and the U.S. wrote about meaningful and meaningless events and rated the extent to which they experienced purpose, coherence, positive and negative implications for self and others, positive affect, and negative affect. In both samples, meaningful and meaningless events differed most in their levels of positive affect, purpose, and positive implications for the self. When entered as predictors of overall event meaningfulness, purpose and positive affect independently predicted meaning. Measures of coherence did not predict the meaningfulness of event with one exception. The extent to which an event offered a new understanding predicted meaning above and beyond purpose and PA. Implications for meaning assessment and theories of meaning are discussed.
DOI: 10.5281/zenodo.5860595
title: Pyrrhura perlata decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860594
title: Pyrrhura perlata decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860607
title: Trichoglossum hirsutum decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860606
title: Trichoglossum hirsutum decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860615
title: Tetradonia laticeps decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860614
title: Tetradonia laticeps decontaminated FSCR

description: .
DOI: 10.6084/m9.figshare.18515690
title: FALD-HCC

description: FALD-HCC data<br>
DOI: 10.6084/m9.figshare.18515690.v1
title: FALD-HCC

description: FALD-HCC data<br>
DOI: 10.5281/zenodo.5860571
title: CoVaxxy Tweet IDs data set

description: A collection of Tweet IDs related to Covid-19 Vaccines, gathered from Twitter since Jan 4, 2021. Please see https://arxiv.org/abs/2101.07694 for more information.
DOI: 10.5281/zenodo.5860619
title: Tamoya ohboya decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860618
title: Tamoya ohboya decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860629
title: Stichodactyla helianthus decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860628
title: Stichodactyla helianthus decontaminated FSCR

description: .
DOI: 10.6084/m9.figshare.18515858
title: Pore size distribution of HPC-2.5 and HPC-5.0.xlsx

description: Pore size distribution of HPC-2.5 and HPC-5.0
DOI: 10.5281/zenodo.5860625
title: Taenaris catops decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860624
title: Taenaris catops decontaminated FSCR

description: .
DOI: 10.25400/lincolnuninz.16892392
title: Motivations and satisfaction of New Zealand domestic tourists

description: Increased tourist pressures can cause deterioration of nature-based tourist destinations and adversely affect visitor satisfaction. This study aims to identify how public participation using mobile devices on-site, can assist in assessing future design scenarios for a popular nature-based destination, within a short day trip from Christchurch in Aotearoa New Zealand. An online survey using participants’ mobile devices at Kura Tāwhiti Castle Hill Rocks identified domestic tourists’ motivational, satisfaction and dissatisfaction factors that were associated with age and visit frequency at the destination. These factors were linked to site experiences, particularly being out in nature, that could be used to design future scenarios for similar nature-based settings in Aotearoa New Zealand. Four future scenarios using 2D photomontages were used to rank domestic visitor preferences for changing path and tracks, fencing, signage, structures and people. The study found that the low impact scenario with the least people was the most desirable. This high level of sensitivity of New Zealanders to change at outdoor recreational destinations suggests that nature-based settings must be designed and managed with considerable care to minimize the perception of over-crowding and deterioration of the site experience, particular for return visitors.
DOI: 10.5281/zenodo.5838618
title: Observations and Modeling of a Buoyant Plume Exiting into a Tidal Cross-flow and Exhibiting Along-front Instabilities

description: This post-processed dataset contains the sUAS imagery and numerical modeling output used in the paper "Observations and Modeling of a Buoyant Plume Exiting into a Tidal Cross-flow and Exhibiting Along-front Instabilities". The provided code details the frontal processing routine used for both the observations and modeling results.
DOI: 10.5281/zenodo.5838617
title: Observations and Modeling of a Buoyant Plume Exiting into a Tidal Cross-flow and Exhibiting Along-front Instabilities

description: This post-processed dataset contains the sUAS imagery and numerical modeling output used in the paper "Observations and Modeling of a Buoyant Plume Exiting into a Tidal Cross-flow and Exhibiting Along-front Instabilities". The provided code details the frontal processing routine used for both the observations and modeling results.
DOI: 10.34740/kaggle/dsv/3051745
title: Our World in Data - COVID-19
DOI: 10.5281/zenodo.5860631
title: Scolopax rusticola decontaminated FSCR

description: .
DOI: 10.5281/zenodo.5860630
title: Scolopax rusticola decontaminated FSCR

description: .
DOI: 10.6084/m9.figshare.18318620.v1
title: PCII.tif

description: This result is based on a new phenology-based cropping intensity index (PCII) that can measure cropping intensity at a large scale.
DOI: 10.6084/m9.figshare.18516188
title: Developmental Study raw data_2.xlsx

description: Raw data on mortality data from developmental study
DOI: 10.6084/m9.figshare.18516188.v1
title: Developmental Study raw data_2.xlsx

description: Raw data on mortality data from developmental study
DOI: 10.6084/m9.figshare.18515936.v2
title: Data and Code for "Fast computation of terrain-induced gravitational and magnetic effects on arbitrary undulating surfaces"

description: We propose a new algorithm for the fast computation of terrain-induced gravitational and magnetic effects on arbitrary undulating surfaces. The algorithm is based on a combination of CANDECOMP/PARAFAC (CP) tensor decomposition of gravitational integral kernels and 2D Fast Fourier Transform (FFT) evaluation of discrete convolutions. We validate our algorithm by computing the gravitational potential (GP), the gravitational vector (GV), the gravity gradient tensor (GGT), and magnetic fields caused by densely-sampled topographic and bathymetric digital elevation models (DEMs) of selected mountainous areas around the globe. Both constant and variable density/magnetization models are considered. Comparisons between our new method and space-domain rigorous solutions show that with modeling errors well below existing instrumentation error levels, the calculation speed is accelerated thousands of times in all numerical tests. We release the source code of our algorithm in MATLAB language.
DOI: 10.6084/m9.figshare.18516128
title: Data used for SOTIP demonstration

description: Dataset for demonstration SOTIP utility
DOI: 10.6084/m9.figshare.15302229.v3
title: Chiridota genome sequences, cds sequence, protein sequences.

description: We sequenced a C. heheva captured under 1400 meters deep in the Haima cold spring in the South China Sea. After assemblying the genome, the genome was annotated by ab initio and homolog annotation, including braker and genomethreader.
DOI: 10.6084/m9.figshare.18516221
title: test.bb

description: palindromic score
DOI: 10.6084/m9.figshare.18516221.v1
title: test.bb

description: palindromic score