cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29134587
title: Cell-cycle dependent inhibition of BRCA1 signaling by the lysine methyltransferase SET8

description: The cell-cycle regulated methyltransferase SET8 is the sole enzyme responsible for the mono-methylation of histone H4 at lysine 20 (H4K20) that is the substrate for di- and trimethylation mainly by SUV4-20Hs enzymes. Both SET8 and SUV4-20Hs have been implicated in regulating DNA repair pathway choice through the inverse affinities of BRCA1-BARD1 and 53BP1 complexes for disparate methylation states of H4K20. However, the precise and respective functions of each H4K20 methyltransferase in DNA repair pathways remain to be clarified. Here, we show that SET8 acts as a potent chromatin inhibitor of homologous recombination and that its timely degradation during DNA replication is essential for the spontaneous nuclear focal accumulation of BRCA1 and RAD51 complexes during the S phase. Strikingly, the anti-recombinogenic function of SET8 is independent of SUV4–20H activity but requires the subsequent recruitment of the ubiquitin ligase RNF168. Moreover, we show that SET8-induced BRCA1 inhibition is not necessarily related to the loss of BARD1 binding to unmethylated histone H4K20. Instead, it is largely caused by the accumulation of 53BP1 in a manner depending on the concerted activities of SET8 and RNF168 on chromatin. Conversely, the lack of SET8 and H4K20 mono-methylation on newly assembly chromatin after DNA replication led to the untimely accumulation of BRCA1 on chromatin at the subsequent G1 phase. Altogether, these results establish the <i>de novo</i> activity of SET8 on chromatin as a primordial epigenetic lock of the BRCA1-mediated HR pathway during the cell cycle.
DOI: 10.6084/m9.figshare.29134587.v1
title: Cell-cycle dependent inhibition of BRCA1 signaling by the lysine methyltransferase SET8

description: The cell-cycle regulated methyltransferase SET8 is the sole enzyme responsible for the mono-methylation of histone H4 at lysine 20 (H4K20) that is the substrate for di- and trimethylation mainly by SUV4-20Hs enzymes. Both SET8 and SUV4-20Hs have been implicated in regulating DNA repair pathway choice through the inverse affinities of BRCA1-BARD1 and 53BP1 complexes for disparate methylation states of H4K20. However, the precise and respective functions of each H4K20 methyltransferase in DNA repair pathways remain to be clarified. Here, we show that SET8 acts as a potent chromatin inhibitor of homologous recombination and that its timely degradation during DNA replication is essential for the spontaneous nuclear focal accumulation of BRCA1 and RAD51 complexes during the S phase. Strikingly, the anti-recombinogenic function of SET8 is independent of SUV4–20H activity but requires the subsequent recruitment of the ubiquitin ligase RNF168. Moreover, we show that SET8-induced BRCA1 inhibition is not necessarily related to the loss of BARD1 binding to unmethylated histone H4K20. Instead, it is largely caused by the accumulation of 53BP1 in a manner depending on the concerted activities of SET8 and RNF168 on chromatin. Conversely, the lack of SET8 and H4K20 mono-methylation on newly assembly chromatin after DNA replication led to the untimely accumulation of BRCA1 on chromatin at the subsequent G1 phase. Altogether, these results establish the <i>de novo</i> activity of SET8 on chromatin as a primordial epigenetic lock of the BRCA1-mediated HR pathway during the cell cycle.
DOI: 10.6084/m9.figshare.29163311
title: Hair-follicle-associated pluripotent (HAP) stem-cell-sheet implantation accelerates cutaneous wound closure and suppresses scar formation in a mouse model

description: Patients frequently experience physical, mental, and even financial distress because of acute or chronic skin wounds. In severe situations, scarring on the skin can be quite noticeable, cause persistent discomfort, restrict joint motion, or be mentally taxing. Hair-follicle-associated pluripotent (HAP) stem cells were discovered by our laboratory, in the bulge area of the hair follicle and can differentiate to neurons, glia, beating cardiomyocytes, keratinocytes and nascent vessels. In the present study, HAP stem cell sheets were formed by culturing the upper part of hair follicles and implanting into mice with skin ulcers. The HAP stem cell sheets contained keratinocytes, endothelial cells and neurons. Autologous HAP stem cell sheet implantation to the dorsal wound in C57BL/6J mice significantly accelerated wound closure compared with non-implanted control mice. HAP-stem-cell sheets expressing green fluorescent protein (GFP) implanted into nude mice differentiated into keratinocytes in the epidermis, and neurons and endothelial cells in the dermis. The thicknesses of the epidermis and dermis and M2 macrophage and myofibroblast infiltration into the wound were significantly decreased in HAP-stem cell-implanted mice compared with non-implanted control mice. Expression levels of TGF-β1, COL1A2 and COL3A1 mRNA in the wound were significantly decreased in HAP stem cell-implanted mice compared with non-implanted control mice. These results suggest that implanting HAP stem cell sheets accelerates cutaneous wound closure and suppresses scar formation. The HAP stem cells used in the present study thus have potential as a future clinical strategy for accelerating wound healing.
DOI: 10.6084/m9.figshare.29163311.v1
title: Hair-follicle-associated pluripotent (HAP) stem-cell-sheet implantation accelerates cutaneous wound closure and suppresses scar formation in a mouse model

description: Patients frequently experience physical, mental, and even financial distress because of acute or chronic skin wounds. In severe situations, scarring on the skin can be quite noticeable, cause persistent discomfort, restrict joint motion, or be mentally taxing. Hair-follicle-associated pluripotent (HAP) stem cells were discovered by our laboratory, in the bulge area of the hair follicle and can differentiate to neurons, glia, beating cardiomyocytes, keratinocytes and nascent vessels. In the present study, HAP stem cell sheets were formed by culturing the upper part of hair follicles and implanting into mice with skin ulcers. The HAP stem cell sheets contained keratinocytes, endothelial cells and neurons. Autologous HAP stem cell sheet implantation to the dorsal wound in C57BL/6J mice significantly accelerated wound closure compared with non-implanted control mice. HAP-stem-cell sheets expressing green fluorescent protein (GFP) implanted into nude mice differentiated into keratinocytes in the epidermis, and neurons and endothelial cells in the dermis. The thicknesses of the epidermis and dermis and M2 macrophage and myofibroblast infiltration into the wound were significantly decreased in HAP-stem cell-implanted mice compared with non-implanted control mice. Expression levels of TGF-β1, COL1A2 and COL3A1 mRNA in the wound were significantly decreased in HAP stem cell-implanted mice compared with non-implanted control mice. These results suggest that implanting HAP stem cell sheets accelerates cutaneous wound closure and suppresses scar formation. The HAP stem cells used in the present study thus have potential as a future clinical strategy for accelerating wound healing.
DOI: 10.5281/zenodo.16942089
title: A database of skill scores on solar forecasting

description: From an initial pool of 1,858 papers in Google Scholar (GS) and 418 papers in Web of Science (WoS), we screened the full texts of 500 papers between 2006 and 2025 and extracted data from 250 studies on both solar irradiance and PV output forecasting. The resulting database contains 5,277 observations across 11 variables, encompassing inputs, methodological, climatic, and contextual factors that differentiate forecast performance.

The "r_subset_clean.csv" provides the database. The "LR_exported.Rmd" and the "mars_plots_all.Rmd" files provide the code to conduct the MARS and linear regressions on the data.
DOI: 10.5281/zenodo.7274380
title: A database of skill scores on solar forecasting

description: From an initial pool of 1,858 papers in Google Scholar (GS) and 418 papers in Web of Science (WoS), we screened the full texts of 500 papers between 2006 and 2025 and extracted data from 250 studies on both solar irradiance and PV output forecasting. The resulting database contains 5,277 observations across 11 variables, encompassing inputs, methodological, climatic, and contextual factors that differentiate forecast performance.

The "r_subset_clean.csv" provides the database. The "LR_exported.Rmd" and the "mars_plots_all.Rmd" files provide the code to conduct the MARS and linear regressions on the data.
DOI: 10.15468/dl.cy6yap
title: Occurrence Download

description: A dataset containing 94502 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pennatulacea, Antipatharia, Porifera, Scleractinia, Hyocrinida, Psamminidae, Isocrinida, Anthoathecata, Syringamminidae, Comatulida, Acrophytidae, Alcyoniidae, Aquaumbridae, Corymbophytidae, Leptophytidae, Nephtheidae, Nidaliidae, Paralcyoniidae, Xeniidae, Chrysogorgiidae, Ellisellidae, Ifalukellidae, Isididae, Primnoidae, Acanthogorgiidae, Dendrobrachiidae, Gorgoniidae, Keroeididae, Plexauridae, Taiaroidae, Anthothelidae, Briareidae, Coralliidae, Melithaeidae, Paragorgiidae, Parisididae, Spongiodermidae, Subergorgiidae, Victorgorgiidae, Acrossotidae, Arulidae, Clavulariidae, Coelogorgiidae, Cornulariidae, Pseudogorgiidae, Tubiporidae, Acanthoaxiidae, Haimeidae, Paramuriceidae, Parasphaerascleridae, Viguieriotidae, Botrucnidiferidae, Angianthula, Atractanthula, Botruanthus, Botrucnidiata, Botrucnidifer, Calpanthula, Cerianthula, Gymnanthula, Hensenanthula, Ovanthula, Sphaeranthula, Cerianthidae, Anthoactis, Apiactis, Bursanthus, Ceriantheomorphe, Ceriantheopsis, Cerianthus, Engodactylactis, Isodactylactis, Nautanthus, Pachycerianthus, Paradactylactis, Parovactis, Peponactis, Plesiodactylactis, Sacculactis, Solasteractis, Synarachnactis, Syndactylactis, Trichactis, Arachnactidae, Arachnactis, Arachnanthus, Dactylactis, Isapiactis, Isarachnactis, Isarachnanthus, Isovactis, Ovactis, Paranactinia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is Absent"
 ]
 }
 },
 "Geometry MULTIPOLYGON(((-11 36,-6 36,-6 43,-11 43,-11 36)),((-32 35,-23 35,-23 41,-32 41,-32 35)),((-18.5 31,-15 31,-15 34,-18.5 34,-18.5 31)))"
 ]
}

 The dataset includes 94502 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042430-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.11588/portal.gsi.68ac633d17f71
title: M. Louis Cartier
DOI: 10.7910/dvn/ctviur
title: Culture and the Performance of Government Officials

description: data and do files for the listed paper
DOI: 10.15468/dl.bqrxuu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Neolissochilus spinulosus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042445-250811113504898/datasets/export for details.
DOI: 10.15468/dl.fysxmj
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trifolium aureum",
 "Country is Chile",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042449-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sgqsg4
title: Occurrence Download

description: A dataset containing 2244 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trifolium aureum",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2244 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042448-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uzymgw
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trifolium aureum",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042447-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wx36n5
title: Occurrence Download

description: A dataset containing 260274906 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tracheophyta)",
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 260274906 records from 9157 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042411-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26520597
title: Distributed zero-gradient-sum optimisation algorithm with an edge-based adaptive event-triggered mechanism

description: This paper addresses the continuous-time distributed optimisation problem over networks, where the global objective function is formed by a sum of convex local objective functions. To avoid continuous communication among agents, a distributed adaptive Zero-Gradient-Sum (ZGS) optimisation algorithm under a dynamic event-triggered scheme is proposed. This is achieved by dynamically adjusting the coupling strengths of adjacent agents within the network. Our analysis confirms that the proposed algorithm will exponentially converge to the optimal solution provided that the underlying communication graph is undirected and connected. Additionally, we demonstrate that our event-triggered scheme is not subject to Zeno behaviour, which is a theoretical concern in systems with frequent event triggers.
DOI: 10.6084/m9.figshare.26520597.v1
title: Distributed zero-gradient-sum optimisation algorithm with an edge-based adaptive event-triggered mechanism

description: This paper addresses the continuous-time distributed optimisation problem over networks, where the global objective function is formed by a sum of convex local objective functions. To avoid continuous communication among agents, a distributed adaptive Zero-Gradient-Sum (ZGS) optimisation algorithm under a dynamic event-triggered scheme is proposed. This is achieved by dynamically adjusting the coupling strengths of adjacent agents within the network. Our analysis confirms that the proposed algorithm will exponentially converge to the optimal solution provided that the underlying communication graph is undirected and connected. Additionally, we demonstrate that our event-triggered scheme is not subject to Zeno behaviour, which is a theoretical concern in systems with frequent event triggers.
DOI: 10.15468/dl.t2cex6
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "GadmGid is IDN.8_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Cercopithecidae"
 ]
}

 The dataset includes 88 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011287-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jjpjej
title: Occurrence Download

description: A dataset containing 88972 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Synaleurodicus serratus Martin, 1999, Coridromius monotocopsis Tatarnic & Cassis, 2008, Aleurotrachelus limbatus (Maskell, 1896), Agriopocoris chadwicki Miller, 1954, Aleurocanthus hirsutus (Maskell, 1896), Aleurocanthus pendleburyi Corbett, 1935, Melanacanthus scutellaris (Dallas, 1852), Pseudozaphanera wariensis (Martin, 1999), Agriopocoris froggatti Miller, 1954, Coridromius chenopoderis Tatarnic & Cassis, 2008, Hemiberlesia rapax (Comstock, 1881), Hemicriconemoides minor Brzeski & Reay, 1982, Tiracola plagiata (Walker, 1857), Hyposidra talaca (Walker, 1860), Setothosea asigna (van Eecke, 1929), Hyposidra picaria (Walker, 1866), Thosea trifurca Holloway, 1986, Olene inclusa (Walker, 1856), Orgyia basinigra (Heylaerts, 1892), Orgyia osseata Walker, 1862, Autoba abrupta Walker, 1865, Heylaertsia griseata (Hampson, 1893), Degia imparata Walker, 1862, Striglina scitaria (Walker, 1862), Homona fatalis Meyrick, 1936, Indarbela quadrinotata Walker, 1856, Poekilloptera phalaenoides (Linnaeus, 1758), Penthicodes farinosa farinosa, Agrilus fulvovittatus Fisher, 1921, Ploneta diducta Snellen, 1900, Eumeta variegatus (Snellen, 1879), Ericeia inangulata (Guenée, 1852), Ceratocystis manginecans M.van Wyk, Al-Adawi & M.J.Wingf., Pongo abelii Lesson, 1827, Pongo pygmaeus (Linnaeus, 1760), Hypolycaena philippus (Fabricius, 1793), Cleora repetita (Butler, 1882), Platyrrhinus recifinus (Thomas, 1901), Chiroderma villosum Peters, 1860, Artibeus obscurus (Schinz, 1821), Artibeus gnomus Handley, 1987, Rhinophylla pumilio Peters, 1865, Sturnira tildae de la Torre, 1959, Artibeus lituratus (Olfers, 1818), Phyllostomus hastatus (Pallas, 1767), Artibeus cinereus (Gervais, 1856), Uroderma magnirostrum Davis, 1968, Carollia perspicillata (Linnaeus, 1758), Sturnira lilium (E.Geoffroy, 1810), Vampyressa pusilla (Wagner, 1843))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 88972 records from 556 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011278-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28715954
title: Assembly on Sample by Galaxy website (Marwah Sabo)

description: This is the assembly data done by the Galaxy Ur website using the Megahit tool for water, WS, and sediment samples taken from Al-Lith Hot Springs, Saudi Arabia, for analyzing cyanobacteria.
DOI: 10.15468/dl.xp3agc
title: Occurrence Download

description: A dataset containing 1949 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Vegetable Germplasm Occurrence"
 ]
}

 The dataset includes 1949 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002867-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3yjjbh
title: Occurrence Download

description: A dataset containing 406 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Perophora japonica Oka, 1927",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 406 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002863-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.67hrk2
title: Occurrence Download

description: A dataset containing 1782 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Prosopis glandulosa Torr."
 ]
}

 The dataset includes 1782 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013171-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2h724z
title: CCDC 2300700: Experimental Crystal Structure Determination

description: Related Article: Xiaolin Yu|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2p2jt4
title: CCDC 2475096: Experimental Crystal Structure Determination

description: Related Article: Min Tan, Yongsheng Shen, Haohua Chen|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.q6svzh
title: Occurrence Download

description: A dataset containing 6620 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "OccurrenceStatus is Present",
 "TaxonKey is Khaya senegalensis"
 ]
}

 The dataset includes 6620 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014121-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bmkpwm
title: Occurrence Download

description: A dataset containing 6620 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "TaxonKey is Khaya senegalensis"
 ]
}

 The dataset includes 6620 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014118-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yczcyt
title: Occurrence Download

description: A dataset containing 6620 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "OccurrenceStatus is Present",
 "TaxonKey is Khaya senegalensis"
 ]
}

 The dataset includes 6620 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014119-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fkdbjn
title: Occurrence Download

description: A dataset containing 6620 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "OccurrenceStatus is Present",
 "TaxonKey is Khaya senegalensis"
 ]
}

 The dataset includes 6620 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014120-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e8z2z4
title: Occurrence Download

description: A dataset containing 43761 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rumex maritimus"
 ]
}

 The dataset includes 43761 records from 672 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014116-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.