cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.5twt2e
title: Occurrence Download

description: A dataset containing 2193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Ognorhynchus icterotis (Massena & Souance, 1854)"
 ]
}

 The dataset includes 2193 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0197829-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.brrs5x
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Nyctimystes dux (Richards & Oliver, 2006)"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003694-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4gw1qr
title: Occurrence Download

description: A dataset containing 5089 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Kastikka Floristic Archives (Kastikka Ark)",
 "TaxonKey is Lonicera xylosteum L."
 ]
}

 The dataset includes 5089 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014179-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p3kwev
title: Occurrence Download

description: A dataset containing 963055 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "DatasetKey is iNaturalist Research-grade Observations"
 ]
}

 The dataset includes 963055 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126559-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vgcssz
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cola kimbozensis Cheek"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003657-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gbnidc
title: Occurrence Download

description: A dataset containing 12067 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Unknown evidence",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Material sample"
 ]
 },
 "Year 2008-2018",
 "Geometry POLYGON((-457.14111 25.72074,-457.31689 27.37177,-456.3501 28.53627,-454.37256 29.49699,-453.31787 29.80252,-453.49365 32.99024,-453.49365 35.60372,-453.55957 37.09024,-454.28467 37.47486,-465.24902 37.37016,-466.19841 37.39374,-468.07524 37.44032,-470.87402 37.50973,-475.00488 37.64903,-475.00488 37.64903,-475.62012 32.39852,-470.6543 31.50363,-468.3252 31.05293,-466.91895 32.10119,-465.4248 31.05293,-463.31543 29.07538,-461.55762 29.76438,-460.41504 28.53627,-459.09668 26.27371,-457.14111 25.72074))",
 {
 "or" : [
 "DatasetKey is Bee Biology and Systematics Laboratory",
 "DatasetKey is iNaturalist Research-grade Observations",
 "DatasetKey is Snow Entomological Museum Collection",
 "DatasetKey is Patterns of widespread decline in North American bumble bees",
 "DatasetKey is Illinois Natural History Survey Insect Collection",
 "DatasetKey is Arizona State University Hasbrouck Insect Collection",
 "DatasetKey is Northern Arizona University - Arthropod Collection",
 "DatasetKey is BugGuide - Identification, Images, & Information For Insects, Spiders & Their Kin For the United States & Canada",
 "DatasetKey is Entomology Division, Yale Peabody Museum",
 "DatasetKey is New Mexico State Collection of Arthropods",
 "DatasetKey is Xerces Society - Bumble Bee Watch"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Apidae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 12067 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014179-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k8ju8m
title: Occurrence Download

description: A dataset containing 321 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Observation"
 ]
 },
 "GadmGid is BGD.2.4_1",
 {
 "or" : [
 "Issue is Coordinate rounded",
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Country derived from coordinates",
 "Issue is Occurrence status inferred from individual count"
 ]
 },
 "OccurrenceStatus is Present",
 "Year 2000-2020"
 ]
}

 The dataset includes 321 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0129558-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kysxhg
title: Occurrence Download

description: A dataset containing 4989 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Stachyridopsis rufifrons (Hume, 1873)"
 ]
}

 The dataset includes 4989 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003965-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.csvsnm
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-97.4707 17.07711,-96.74423 17.07711,-96.74423 17.83488,-97.4707 17.83488,-97.4707 17.07711))",
 "TaxonKey is Capsicum L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 25 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014180-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s9encc
title: Occurrence Download

description: A dataset containing 33729 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hippocampus Perry, 1811"
 ]
}

 The dataset includes 33729 records from 290 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0133954-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4j3zu6
title: Occurrence Download

description: A dataset containing 182 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Ranoidea maculosa (Tyler & Martin, 1977)"
 ]
}

 The dataset includes 182 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003701-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5oam14
title: Occurrence Download

description: A dataset containing 323 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Tedania ignis (Duchassaing & Michelotti, 1864)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 323 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014180-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4qhuy8
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "GadmGid is MEX.6_1",
 "TaxonKey is Ursus americanus Pallas, 1780"
 ]
}

 The dataset includes 90 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0136787-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2mgcm8
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Dolichotis patagonum (Zimmermann, 1780)"
 ]
}

 The dataset includes 87 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0135327-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vxwrv9
title: Occurrence Download

description: A dataset containing 5818 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bischofia javanica Blume"
 ]
}

 The dataset includes 5818 records from 151 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003953-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p0pnug
title: Occurrence Download

description: A dataset containing 536140 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is United States of America",
 "Country is Canada",
 "Country is Mexico"
 ]
 },
 "TaxonKey is Halictidae"
 ]
}

 The dataset includes 536140 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014180-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11150959
title: Phosphorous fertilization and soil pH affect the growth of deciduous trees in a temperate hardwood forest

description: To better understand how a forest’s response to P limitation and acidic deposition can change over time, we added P, limestone to raise pH, and a cross-treatment where both P and limestone were added to 3 different northeastern Ohio forest stands over a 12-year period. Internally, we call this experiment APEX, which stands for Acid Precipitation EXperiment. We tracked diameter at breast height (DBH) of the trees annually, conducted foliar nutrient analyses, and collected tree roots to assess treatment impacts on mycorrhizal colonization. We analyzed our dataset in three sections: the first 6 years after manipulation, the latter 6 years, and the entire 12-year period. These sections allowed us to compare differences between early responses to manipulation and later responses. The R code included here shows how these sections of data were analyzed using linear mixed effect models and Tukey post hoc tests (with the R packages lme4 and multcomp, respectively) and graphed (with the package ggplot2). The three R code files include analyses of 1) litter biomass and chemistry (APEX_leaf_litter_R_code.R), 2) ectomycorrhizal (EM) and arbscular mycorrhizal (AM) fungal colonization and root biomass estimates from trees associated with these mycorrhizal types (APEX_mycorrhizal_roots_R_code.R), and 3) relative basal area increment that was calculated for different tree species and mycorrhizal association types using DBH measurements (APEX_RBAI_R_code.R). All input csv files are included here.
DOI: 10.5281/zenodo.11150960
title: Phosphorous fertilization and soil pH affect the growth of deciduous trees in a temperate hardwood forest

description: To better understand how a forest’s response to P limitation and acidic deposition can change over time, we added P, limestone to raise pH, and a cross-treatment where both P and limestone were added to 3 different northeastern Ohio forest stands over a 12-year period. Internally, we call this experiment APEX, which stands for Acid Precipitation EXperiment. We tracked diameter at breast height (DBH) of the trees annually, conducted foliar nutrient analyses, and collected tree roots to assess treatment impacts on mycorrhizal colonization. We analyzed our dataset in three sections: the first 6 years after manipulation, the latter 6 years, and the entire 12-year period. These sections allowed us to compare differences between early responses to manipulation and later responses. The R code included here shows how these sections of data were analyzed using linear mixed effect models and Tukey post hoc tests (with the R packages lme4 and multcomp, respectively) and graphed (with the package ggplot2). The three R code files include analyses of 1) litter biomass and chemistry (APEX_leaf_litter_R_code.R), 2) ectomycorrhizal (EM) and arbscular mycorrhizal (AM) fungal colonization and root biomass estimates from trees associated with these mycorrhizal types (APEX_mycorrhizal_roots_R_code.R), and 3) relative basal area increment that was calculated for different tree species and mycorrhizal association types using DBH measurements (APEX_RBAI_R_code.R). All input csv files are included here.
DOI: 10.15468/dl.nytssz
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-109.37806258849503 22.338127484525813,-105.37806258849503 22.338127484525813,-105.37806258849503 26.338127484525813,-109.37806258849503 26.338127484525813,-109.37806258849503 22.338127484525813))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chelonia mydas (Linnaeus, 1758)",
 "Year 2018-2018"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011089-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11042578
title: Rapid Inference of Antibiotic Susceptibility Phenotype of Uropathogens using Metagenomic Sequencing with Neighbour Typing - RASE Databases for E. coli and Klebsiella spp

description: RASE databases used for the prediction of antibiotic phenotype in the paper titled "Rapid Inference of Antibiotic Susceptibility Phenotype of Uropathogens using Metagenomic Sequencing with Neighbour Typing". A database for each of Escherichia coli and Klebsiella spp. are available, including the original metadata and genetic trees used to create the databases.
DOI: 10.5281/zenodo.11042579
title: Rapid Inference of Antibiotic Susceptibility Phenotype of Uropathogens using Metagenomic Sequencing with Neighbour Typing - RASE Databases for E. coli and Klebsiella spp

description: RASE databases used for the prediction of antibiotic phenotype in the paper titled "Rapid Inference of Antibiotic Susceptibility Phenotype of Uropathogens using Metagenomic Sequencing with Neighbour Typing". A database for each of Escherichia coli and Klebsiella spp. are available, including the original metadata and genetic trees used to create the databases.
DOI: 10.15468/dd.hwecr2
title: Test for derived dataset

description: This data was filtered using a fake protocol
DOI: 10.15468/dd.kwr4p7
title: Test for derived dataset

description: This data was filtered using a fake protocol
DOI: 10.15468/dl.nypbcs
title: Occurrence Download

description: A dataset containing 953074 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gavia stellata (Pontoppidan, 1763)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 953074 records from 290 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011088-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.atj85y
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-109.37806258849503 22.338127484525813,-105.37806258849503 22.338127484525813,-105.37806258849503 26.338127484525813,-109.37806258849503 26.338127484525813,-109.37806258849503 22.338127484525813))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chelonia mydas (Linnaeus, 1758)",
 "Year 2019-2019"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011091-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7nbkcx
title: Occurrence Download

description: A dataset containing 351391 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Lamium album L.)"
 ]
}

 The dataset includes 351391 records from 1761 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011090-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.emgt7r
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Côte d’Ivoire",
 "HasCoordinate is true",
 "TaxonKey is Blighia sapida K.D.Koenig",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 46 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018936-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.589dvm
title: Occurrence Download

description: A dataset containing 11692 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Material sample"
 ]
 },
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aedes aegypti (Linnaeus, 1762)",
 "Year 2000-2021"
 ]
}

 The dataset includes 11692 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147781-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w9yk7g
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Daucus arcanus García-Martín & Silvestre"
 ]
}

 The dataset includes 32 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0301684-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nhdmwd
title: Occurrence Download

description: A dataset containing 34258 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Animal Sound Archive"
 ]
}

 The dataset includes 34258 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082450-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rb3j6a
title: Occurrence Download

description: A dataset containing 1189 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Guaiacum sanctum L."
 ]
}

 The dataset includes 1189 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013491-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qfgyhe
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Myanmar",
 "TaxonKey is Aythya ferina (Linnaeus, 1758)"
 ]
}

 The dataset includes 27 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015746-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a8p7gu
title: Occurrence Download

description: A dataset containing 1028 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "TaxonKey is Rhizophora racemosa G.Mey.",
 "Year 1950-2021"
 ]
}

 The dataset includes 1028 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0315472-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t2ysk4
title: Occurrence Download

description: A dataset containing 18225 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Celosia argentea L."
 ]
}

 The dataset includes 18225 records from 327 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040515-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g6fp4a
title: Occurrence Download

description: A dataset containing 36515 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1970-2000",
 "HasCoordinate is true",
 "TaxonKey is Ribes uva-crispa L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 36515 records from 161 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018951-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4ad2pz
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Alternanthera philoxeroides (Mart.) Griseb.)",
 "HasCoordinate is true",
 "Country is Belgium",
 "Year is 2009"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012307-200613084148143/datasets/export for details.
DOI: 10.15468/dl.gfa16x
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 1960-2019",
 "TaxonKey is Cathariostachys madagascariensis (A.Camus) S.Dransf."
 ]
}

 The dataset includes 50 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010644-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.