cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.r63uba
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((3.346563969145634 51.34065766032442, 3.3460926112784364 51.34328403704321, 3.3448121024682576 51.34580234228475, 3.3427715388738046 51.34811577439368, 3.340049264396367 51.35013539346567, 3.336749871224324 51.35178354473948, 3.3330001839768344 51.35299684921157, 3.328944381225778 51.35372864557284, 3.3247384425826043 51.35395078866246, 3.320544136605478 51.35365473451961, 3.316522783295016 51.35285186980881, 3.312829034059848 51.351573072793975, 3.309604911326323 51.34986752295262, 3.3069743394728297 51.34780080554817, 3.305038378970932 51.3454523848371, 3.3038713474142827 51.342912543988035, 3.3035179757766384 51.34027891027112, 3.3039917073122647 51.33765269985691, 3.305274201743117 51.33513482705765, 3.307316060617769 51.33282202769328, 3.3100387428402267 51.330803145338514, 3.313337594146543 51.32915572259607, 3.317085872411626 51.32794302755718, 3.3211396135683686 51.32721162875029, 3.325343151864402 51.32698961081213, 3.3295350841727394 51.32728549865036, 3.333554451862395 51.328087930918855, 3.3372469058175365 51.32936609518909, 3.3404706208064203 51.33107090831319, 3.3431017345260012 51.333136897186286, 3.345039104010436 51.33548470846417, 3.346208197161227 51.33802415175894, 3.346563969145634 51.34065766032442))",
 "KingdomKey is one of (Animalia, Fungi, Plantae)",
 "Year is one of (2016, 2017, 2018, 2019, 2020, 2021, 2022, 2023, 2024, 2025, 2026)",
 "Modified is greater than or equal to 2026-01-20"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002376-260119153935675/datasets/export for details.
DOI: 10.15468/dl.jbvjvt
title: Occurrence Download

description: A dataset containing 94341371 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Spain"
 ]
}

 The dataset includes 94341371 records from 3267 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002316-260119153935675/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mcv6x6
title: Occurrence Download

description: A dataset containing 1181 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Iran (Islamic Republic of)",
 "GadmGid is one of (IRN.11_1, IRN.11.2_1, IRN.11.14_1, IRN.3_1)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ardea cinerea"
 ]
}

 The dataset includes 1181 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000916-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13807394
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5281/zenodo.17599238
title: Notas de leitura do processo "Tribunal e Casa dos Magistrados [1957-1979]"

description: Notas de leitura do processo "Tribunal e Casa dos Magistrados [1957-1979]" existente no Arquivo Municipal de Bragança.

Registo[s] efetuado[s] em março de 2023 no âmbito do projeto de investigação ReARQ.IB – Built Environment Knowledge for Resilient, Sustainable Communities: Understanding Everyday Modern Architecture and Urban Design in the Iberian Peninsula (1939-1985) (ERC GA949686) e publicado online em https://arquitecturaaqui.eu/pt/documentacao/processos/10029/tribunal-e-casa-dos-magistrados-1957-1979. 

Dados exportados da plataforma Arquitectura Aqui (https://arquitecturaaqui.eu), repositório do referido projeto, em novembro de 2025.
DOI: 10.5281/zenodo.17599239
title: Notas de leitura do processo "Tribunal e Casa dos Magistrados [1957-1979]"

description: Notas de leitura do processo "Tribunal e Casa dos Magistrados [1957-1979]" existente no Arquivo Municipal de Bragança.

Registo[s] efetuado[s] em março de 2023 no âmbito do projeto de investigação ReARQ.IB – Built Environment Knowledge for Resilient, Sustainable Communities: Understanding Everyday Modern Architecture and Urban Design in the Iberian Peninsula (1939-1985) (ERC GA949686) e publicado online em https://arquitecturaaqui.eu/pt/documentacao/processos/10029/tribunal-e-casa-dos-magistrados-1957-1979. 

Dados exportados da plataforma Arquitectura Aqui (https://arquitecturaaqui.eu), repositório do referido projeto, em novembro de 2025.
DOI: 10.15468/dl.rgy5nm
title: Occurrence Download

description: A dataset containing 1891 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 7.43282123041014",
 "DecimalLongitude is less than 7.43588078359453",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 1891 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000917-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15064563
title: Spatial patterning of fibroblast TGFβ signaling underlies treatment resistance in rheumatoid arthritis - Xenium data (in vitro co-culture)

description: Xenium spatial transcriptomics datasets for 1) RA synovial tissue biopsies for 17 patients pre- and post-treatment (5101 gene probes, 5k panel+), 2) RA synovial tissue biopsies for 4 patients (50 probes, custom panel), 3) 2D in vitro co-culture system of synovial fibroblasts and endothelial cells (50 probes, custom panel). 

This batch of data corresponds to: 3) in vitro co-culture data.
DOI: 10.5281/zenodo.15064564
title: Spatial patterning of fibroblast TGFβ signaling underlies treatment resistance in rheumatoid arthritis - Xenium data (in vitro co-culture)

description: Xenium spatial transcriptomics datasets for 1) RA synovial tissue biopsies for 17 patients pre- and post-treatment (5101 gene probes, 5k panel+), 2) RA synovial tissue biopsies for 4 patients (50 probes, custom panel), 3) 2D in vitro co-culture system of synovial fibroblasts and endothelial cells (50 probes, custom panel). 

This batch of data corresponds to: 3) in vitro co-culture data.
DOI: 10.15468/dl.793ntx
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Briosia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 54 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000918-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17599383
title: Conjunto de notas de leitura de processos relativos à ação de "Construção de Casas de Habitação para as Classes Pobres, em Bragança (1946-1954)"

description: Conjunto de notas de leitura de processos relativos à ação de "Construção de Casas de Habitação para as Classes Pobres, em Bragança (1946-1954)", existentes no Arquivo Municipal de Bragança e no Património Cultural, I.P., Arquivos e Coleções Documentais da Ex-DGEMN, em Lisboa. 

Registos efetuados em janeiro de 2023 no âmbito do projeto de investigação ReARQ.IB – Built Environment Knowledge for Resilient, Sustainable Communities: Understanding Everyday Modern Architecture and Urban Design in the Iberian Peninsula (1939-1985) (ERC GA949686) e publicado online em https://arquitecturaaqui.eu/pt/atividades/acoes/1815/construcao-de-casas-de-habitacao-para-as-classes-pobres-em-braganca-1946-1954. 

Dados exportados da plataforma Arquitectura Aqui (https://arquitecturaaqui.eu), repositório do referido projeto, em novembro de 2025.
DOI: 10.5281/zenodo.17599382
title: Conjunto de notas de leitura de processos relativos à ação de "Construção de Casas de Habitação para as Classes Pobres, em Bragança (1946-1954)"

description: Conjunto de notas de leitura de processos relativos à ação de "Construção de Casas de Habitação para as Classes Pobres, em Bragança (1946-1954)", existentes no Arquivo Municipal de Bragança e no Património Cultural, I.P., Arquivos e Coleções Documentais da Ex-DGEMN, em Lisboa. 

Registos efetuados em janeiro de 2023 no âmbito do projeto de investigação ReARQ.IB – Built Environment Knowledge for Resilient, Sustainable Communities: Understanding Everyday Modern Architecture and Urban Design in the Iberian Peninsula (1939-1985) (ERC GA949686) e publicado online em https://arquitecturaaqui.eu/pt/atividades/acoes/1815/construcao-de-casas-de-habitacao-para-as-classes-pobres-em-braganca-1946-1954. 

Dados exportados da plataforma Arquitectura Aqui (https://arquitecturaaqui.eu), repositório do referido projeto, em novembro de 2025.
DOI: 10.5281/zenodo.15059436
title: Spatial patterning of fibroblast TGFβ signaling underlies treatment resistance in rheumatoid arthritis - Xenium data (custom panel RA synovium)

description: Xenium spatial transcriptomics datasets for 1) RA synovial tissue biopsies for 17 patients pre- and post-treatment (5101 gene probes, 5k panel+), 2) RA synovial tissue biopsies for 4 patients (50 probes, custom panel), 3) 2D in vitro co-culture system of synovial fibroblasts and endothelial cells (50 probes, custom panel). 

This batch of data corresponds to: 2) custom panel RA synovium data.

We also include here a password-protected copy of Olink proteomics results for a cohort of RA patients (pwd = fibroblast).
DOI: 10.5281/zenodo.15059437
title: Spatial patterning of fibroblast TGFβ signaling underlies treatment resistance in rheumatoid arthritis - Xenium data (custom panel RA synovium)

description: Xenium spatial transcriptomics datasets for 1) RA synovial tissue biopsies for 17 patients pre- and post-treatment (5101 gene probes, 5k panel+), 2) RA synovial tissue biopsies for 4 patients (50 probes, custom panel), 3) 2D in vitro co-culture system of synovial fibroblasts and endothelial cells (50 probes, custom panel). 

This batch of data corresponds to: 2) custom panel RA synovium data.

We also include here a password-protected copy of Olink proteomics results for a cohort of RA patients (pwd = fibroblast).
DOI: 10.15468/dl.xy5um2
title: Occurrence Download

description: A dataset containing 722153 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Specimen, Living Specimen)",
 "Issue is Continent derived from coordinates",
 "TaxonKey is Danaus plexippus"
 ]
}

 The dataset includes 722153 records from 197 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000856-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15058714
title: Spatial patterning of fibroblast TGFβ signaling underlies treatment resistance in rheumatoid arthritis - Xenium data (post-treatment RA synovium)

description: Xenium spatial transcriptomics datasets for 1) RA synovial tissue biopsies for 17 patients pre- and post-treatment (5101 gene probes, 5k panel+), 2) RA synovial tissue biopsies for 4 patients (50 probes, custom panel), 3) 2D in vitro co-culture system of synovial fibroblasts and endothelial cells (50 probes, custom panel). 

This batch of data corresponds to: 1) post-treatment samples.
DOI: 10.5281/zenodo.15058715
title: Spatial patterning of fibroblast TGFβ signaling underlies treatment resistance in rheumatoid arthritis - Xenium data (post-treatment RA synovium)

description: Xenium spatial transcriptomics datasets for 1) RA synovial tissue biopsies for 17 patients pre- and post-treatment (5101 gene probes, 5k panel+), 2) RA synovial tissue biopsies for 4 patients (50 probes, custom panel), 3) 2D in vitro co-culture system of synovial fibroblasts and endothelial cells (50 probes, custom panel). 

This batch of data corresponds to: 1) post-treatment samples.
DOI: 10.25345/c5mc8rv83
title: MassIVE MSV000099972 - Extracellular vesicle analysis from amyotrophic lateral sclerosis lymphoblastoid cell lines as a tool for disease characterization and drug action monitoring
title: Amyotrophic lateral sclerosis (ALS) is a multisystemic spectrum disorder characterized by high clinical variability and the absence of established molecular profiles adequate for patient stratification and therapeutic selection. Among emerging biomarkers, extracellular vesicles (EVs) have shown great promise for potential discrimination of disease subtype-specific molecular signatures and monitoring treatment response. However, studying how different drugs influence the molecular phenotypes encountered in EVs typically requires clinical trials and lengthy protocols. In this context, patient-derived cellular models provide a valuable alternative, offering appropriate platforms to study pharmacological effects on EVs, paving the way towards personalized medicine approaches. In this study, we utilized a collection of lymphoblastoid cell lines (LCLs) from sporadic ALS patients and healthy controls to investigate whether their vesicular secretome could inform on the disease or therapeutic action. Using two distinct EV enrichment methodologies, we analyzed their concentration and proteomic profile. Additionally, leveraging the cell culture model, we explored EV responses to pharmacological intervention. Our findings revealed an increase of EV concentration in ALS samples with respect to healthy controls, which was recovered after pharmacological treatment. Interestingly, proteome analysis of ultracentrifugation-isolated EVs not only classified ALS and control samples but also showed a tendency to separate ALS vs treated ALS samples. This work lays the groundwork for exploring the potential of EVs as both clinical monitoring tools and platforms for identifying novel therapeutic targets in motor neuron diseases, with further validation needed through larger cohort studies, standardized isolation protocols, and longitudinal analyses.
DOI: 10.15468/dl.9adqnt
title: Occurrence Download

description: A dataset containing 1999 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 7.43588078359453",
 "DecimalLongitude is less than 7.43894033677893",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 1999 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000919-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17605/osf.io/25rzv
title: RO test set
DOI: 10.15468/dl.jzn2j7
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pseudoepicoccum",
 "HasCoordinate is true"
 ]
}

 The dataset includes 24 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000921-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15058261
title: Spatial patterning of fibroblast TGFβ signaling underlies treatment resistance in rheumatoid arthritis - Xenium data (pre-treatment RA synovium)

description: Xenium spatial transcriptomics datasets for 1) RA synovial tissue biopsies for 17 patients pre- and post-treatment (5101 gene probes, 5k panel+), 2) RA synovial tissue biopsies for 4 patients (50 probes, custom panel), 3) 2D in vitro co-culture system of synovial fibroblasts and endothelial cells (50 probes, custom panel). 

This batch of data corresponds to: 1) pre-treatment samples.
DOI: 10.5281/zenodo.15058262
title: Spatial patterning of fibroblast TGFβ signaling underlies treatment resistance in rheumatoid arthritis - Xenium data (pre-treatment RA synovium)

description: Xenium spatial transcriptomics datasets for 1) RA synovial tissue biopsies for 17 patients pre- and post-treatment (5101 gene probes, 5k panel+), 2) RA synovial tissue biopsies for 4 patients (50 probes, custom panel), 3) 2D in vitro co-culture system of synovial fibroblasts and endothelial cells (50 probes, custom panel). 

This batch of data corresponds to: 1) pre-treatment samples.
DOI: 10.3929/ethz-c-000786416
title: Dataset: Yield at harvest and species levels from grassland diversity experiments with experimental drought

description: The data contains aboveground dry matter yields from grassland field experiments conducted at two Swiss sites (Zürich and Tänikon). The experiments investigated drought impacts on monocultures and mixtures of two and four key forage species that differed in their functional traits. The species were Lolium perenne L., a shallow-rooted grass; Cichorium intybus L., a deep-rooted herb; Trifolium repens L., a shallow-rooted legume; and Trifolium pratense L., a deep-rooted legume. A nine-week summer drought was experimentally imposed with rainout shelters, and aboveground biomass yields were measured under drought conditions and rainfed controls over several harvests. The dataset includes harvest-level and plant species-level data collected annually.
DOI: 10.5281/zenodo.17599683
title: Notas de leitura do processo "Administração Florestal de Bragança e Casa do Guarda Florestal, Garagem, etc. [1943-1945]"

description: Notas de leitura do processo"Administração Florestal de Bragança e Casa do Guarda Florestal, Garagem, etc. [1943-1945]" existente no Património Cultural, I.P., Arquivos e Coleções Documentais da Ex-DGEMN, em Sacavém. 




Registo efetuado em abril de 2023 no âmbito do projeto de investigação ReARQ.IB – Built Environment Knowledge for Resilient, Sustainable Communities: Understanding Everyday Modern Architecture and Urban Design in the Iberian Peninsula (1939-1985) (ERC GA949686) e publicado online em https://arquitecturaaqui.eu/pt/documentacao/processos/4939/administracao-florestal-de-braganca-e-casa-do-guarda-florestal-garagem-etc-1943-1945. 




Dados exportados da plataforma Arquitectura Aqui (https://arquitecturaaqui.eu), repositório do referido projeto, em novembro de 2025.
DOI: 10.5281/zenodo.17599684
title: Notas de leitura do processo "Administração Florestal de Bragança e Casa do Guarda Florestal, Garagem, etc. [1943-1945]"

description: Notas de leitura do processo"Administração Florestal de Bragança e Casa do Guarda Florestal, Garagem, etc. [1943-1945]" existente no Património Cultural, I.P., Arquivos e Coleções Documentais da Ex-DGEMN, em Sacavém. 




Registo efetuado em abril de 2023 no âmbito do projeto de investigação ReARQ.IB – Built Environment Knowledge for Resilient, Sustainable Communities: Understanding Everyday Modern Architecture and Urban Design in the Iberian Peninsula (1939-1985) (ERC GA949686) e publicado online em https://arquitecturaaqui.eu/pt/documentacao/processos/4939/administracao-florestal-de-braganca-e-casa-do-guarda-florestal-garagem-etc-1943-1945. 




Dados exportados da plataforma Arquitectura Aqui (https://arquitecturaaqui.eu), repositório do referido projeto, em novembro de 2025.
DOI: 10.5281/zenodo.17661029
title: Forest and Non-Forest Maps for Muchinga Province, Zambia (2014, 2017, 2022)

description: Overview

This dataset provides forest and non-forest classification maps for Muchinga Province, Zambia, produced using Landsat-8 OLI, ALOS/PALSAR, and SRTM data processed in Google Earth Engine (GEE). Optical, radar, and terrain features were combined to improve classification accuracy.

Two indices were derived: NDVI (from Landsat-8) and VV/VH cross-polarization ratio (from ALOS/PALSAR). Texture features were computed using the GLCM method applied to seasonal NDVI composites.

A Random Forest classifier (500 trees) was trained with 2,272 samples (1,696 forest, 576 non-forest) collected from high-resolution imagery.

Maps Accuracy

For validation, 300 random samples were used, achieving overall accuracies between 0.90 and 0.94 for 2014, 2017, and 2022.

Table 1: Forest and Non-Forest maps validation, including overall, producer (PA), and user (UA) accuracy values.








class



2014



2017



2022





UA



PA



UA



PA



UA



PA





Forest



0.93



0.91



0.93



0.92



0.91



0.9





Non-Forest



0.9



0.92



0.92



0.92



0.9



0.91





Overall Accuracy



0.92



0.92



0.91






 

Spatial coverage: Muchinga Province, Zambia

Temporal coverage: 2014, 2017, 2022

Spatial resolution: 30 meters

Projection: EPSG:4326 - WGS 84

Data format: GeoTIFF

File description



Muchinga_2014: Forest and Non-Forest map 2014

Muchinga_2017: Forest and Non-Forest map 2017

Muchinga_2022: Forest and Non-Forest map 2022

Difference_maps_Muchinga_2017_2014: Difference between Muchinga_2017 map and Muchinga_2014 map

Difference_maps_Muchinga_2022_2017: Difference between Muchinga_2022 map and Muchinga_2017 map

Difference_maps_Muchinga_2022_2014: Difference between Muchinga_2022 map and Muchinga_2014 map

Qgis_style_forest_nonforest_maps:  QGIS style file for the Forest and Non-Forest maps

Qgis_style_difference_maps:  QGIS style file for the difference maps

Muchinga_training_samples: samples used for training the models
DOI: 10.5281/zenodo.17661028
title: Forest and Non-Forest Maps for Muchinga Province, Zambia (2014, 2017, 2022)

description: Overview

This dataset provides forest and non-forest classification maps for Muchinga Province, Zambia, produced using Landsat-8 OLI, ALOS/PALSAR, and SRTM data processed in Google Earth Engine (GEE). Optical, radar, and terrain features were combined to improve classification accuracy.

Two indices were derived: NDVI (from Landsat-8) and VV/VH cross-polarization ratio (from ALOS/PALSAR). Texture features were computed using the GLCM method applied to seasonal NDVI composites.

A Random Forest classifier (500 trees) was trained with 2,272 samples (1,696 forest, 576 non-forest) collected from high-resolution imagery.

Maps Accuracy

For validation, 300 random samples were used, achieving overall accuracies between 0.90 and 0.94 for 2014, 2017, and 2022.

Table 1: Forest and Non-Forest maps validation, including overall, producer (PA), and user (UA) accuracy values.








class



2014



2017



2022





UA



PA



UA



PA



UA



PA





Forest



0.93



0.91



0.93



0.92



0.91



0.9





Non-Forest



0.9



0.92



0.92



0.92



0.9



0.91





Overall Accuracy



0.92



0.92



0.91






 

Spatial coverage: Muchinga Province, Zambia

Temporal coverage: 2014, 2017, 2022

Spatial resolution: 30 meters

Projection: EPSG:4326 - WGS 84

Data format: GeoTIFF

File description



Muchinga_2014: Forest and Non-Forest map 2014

Muchinga_2017: Forest and Non-Forest map 2017

Muchinga_2022: Forest and Non-Forest map 2022

Difference_maps_Muchinga_2017_2014: Difference between Muchinga_2017 map and Muchinga_2014 map

Difference_maps_Muchinga_2022_2017: Difference between Muchinga_2022 map and Muchinga_2017 map

Difference_maps_Muchinga_2022_2014: Difference between Muchinga_2022 map and Muchinga_2014 map

Qgis_style_forest_nonforest_maps:  QGIS style file for the Forest and Non-Forest maps

Qgis_style_difference_maps:  QGIS style file for the difference maps

Muchinga_training_samples: samples used for training the models