cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.803600
title: Dissolved organic carbon measured on water bottle samples at time series station DYFAMED

description: Dissolved organic carbon (DOC) distribution and dynamics are investigated at the DYFAMED site (central Ligurian Sea, NW Mediterranean) in relation to hydrological and biological contexts, using a 4-year time-series dataset (1991-1994). The DYFAMED site is regarded as a one-dimensional station where simple hydrological mechanisms prevail and where the ecosystem is quite well understood.An average vertical profile of DOC concentration ([DOC]) indicates that maximal concentrations and variability are concentrated in the surface layers. For depths &gt;800 m, the annual variations are on average similar to the analytical standard deviation (~2 µM).The "composite" [DOC] distribution (average distribution over a typical year, integrating about 40 monthly profiles) for surface waters (0-200 m) is closely related to hydrological and phytoplanktonic forcings. It exhibits summer DOC accumulation in surface waters, due to spring-summer stratification and successive phytoplanktonic events such as spring and summer blooms, and winter DOC removal to deeper waters, due to intense vertical mixing.The analysis of vertical [DOC] gradient at 100-m depth as a function of the integrated DOC content in the 0-100-m layer makes it possible to objectively distinguish three specific periods: the winter vertical mixing period, the period of stratification and spring phytoplankton bloom, and the period of stratification re-inforcement and summer-fall phytoplankton bloom. We recalculate the vertical DOC fluxes to deep waters using a larger original dataset, after the first direct calculation (Deep-Sea Res. 40 (10) (1993) 1963, 1972) that was reproduced for other oceanic areas. The seasonal variations of the "composite" [DOC] distribution in surface waters are significantly correlated to the apparent oxygen utilization distribution, but the biogeochemical significance of such a correlation is still under examination. The global significance of our local findings is presented and the role of the oceanic DOC in the global carbon cycle is emphasized, especially with respect to several current issues, such as the oceanic "missing sink" and the equivalence between new production and exported production.
DOI: 10.1594/pangaea.805273
title: Concentrations of dimethylsulfoniopropionate (DMSP) measured on water bottle samples during THALASSA cruise PROSOPE
DOI: 10.1594/pangaea.805278
title: Concentrations of total dissolved iron measured on water bottle samples during THALASSA cruise PROSOPE
DOI: 10.1594/pangaea.806218
title: Water temperature measured in Pond M011 on Samoylov Island, 2010-2011
DOI: 10.1594/pangaea.853640
title: Water temperature in interpolygonal and polygonal ponds
DOI: 10.1594/pangaea.806209
title: Water temperature measured on Samoylov Island, 2006-2011
DOI: 10.1594/pangaea.806217
title: Water temperature measured in Pond M003 on Samoylov Island, 2010-2011
DOI: 10.1594/pangaea.843051
title: (Table 1) Main catchment, land-use and soil characteristics of the San Francisco basin and subbasins, Ecuador
DOI: 10.1594/pangaea.806219
title: Water temperature measured in Pond M013 on Samoylov Island, 2010-2011
DOI: 10.1594/pangaea.806210
title: Water temperature measured in Fish lake, Samoylov Island, 2009-2011
DOI: 10.1594/pangaea.806211
title: Water temperature measured in Molo lake, Samoylov Island, 2009-2011
DOI: 10.5281/zenodo.14861990
title: CURRENT PROBLEMS IN MEDICAL SOCIOLOGY
DOI: 10.5281/zenodo.14861991
title: CURRENT PROBLEMS IN MEDICAL SOCIOLOGY
DOI: 10.5281/zenodo.14862000
title: ZAMONAVIY SHAROITDA MEHMONXONALARNI AVTOMATLASHTIRISH TIZIMIGA O'TKAZISH VA XIZMAT KO'RSATISHDA YANGI INNOVATSION TEXNOLOGIYALARDAN FOYDALANISH SAMARADORLIGINI TAKOMILLASHTIRISH.
DOI: 10.5281/zenodo.14862001
title: ZAMONAVIY SHAROITDA MEHMONXONALARNI AVTOMATLASHTIRISH TIZIMIGA O'TKAZISH VA XIZMAT KO'RSATISHDA YANGI INNOVATSION TEXNOLOGIYALARDAN FOYDALANISH SAMARADORLIGINI TAKOMILLASHTIRISH.
DOI: 10.5281/zenodo.14862010
title: BOLALARDA QIZAMIQNING ZAMONAVIY KLINIK EPIDEMIOLOGIK XUSUSIYATLARI
DOI: 10.5281/zenodo.14862011
title: BOLALARDA QIZAMIQNING ZAMONAVIY KLINIK EPIDEMIOLOGIK XUSUSIYATLARI
DOI: 10.5281/zenodo.14862015
title: ПРАВОВАЯ ОБОСНОВАННОСТЬ КАТЕГОРИЙ "ХАЛЯЛ" (ДОЗВОЛЕННОЕ) и "ХАРАМ" (ЗАПРЕТНОЕ) В ПРОИЗВЕДЕНИИ "ХИДАЯ" БУРХАНУДДИНА МАРГИНАНИ
DOI: 10.5281/zenodo.14862016
title: ПРАВОВАЯ ОБОСНОВАННОСТЬ КАТЕГОРИЙ "ХАЛЯЛ" (ДОЗВОЛЕННОЕ) и "ХАРАМ" (ЗАПРЕТНОЕ) В ПРОИЗВЕДЕНИИ "ХИДАЯ" БУРХАНУДДИНА МАРГИНАНИ
DOI: 10.5281/zenodo.14862019
title: THE ROLE OF FOREIGN LANGUAGE EDUCATION IN MODERN SOUTH KOREA: A FOCUS ON ARABIC LANGUAGE
DOI: 10.5281/zenodo.14862020
title: THE ROLE OF FOREIGN LANGUAGE EDUCATION IN MODERN SOUTH KOREA: A FOCUS ON ARABIC LANGUAGE
DOI: 10.5281/zenodo.14862024
title: IQTISОDCHI TАLАBАLАRNING KАSBIY MАLАKАLАRINI CLIL  YОNDАSHUVI ОRQАLI RIVОJLАNTIRISH
DOI: 10.5281/zenodo.14862025
title: IQTISОDCHI TАLАBАLАRNING KАSBIY MАLАKАLАRINI CLIL  YОNDАSHUVI ОRQАLI RIVОJLАNTIRISH
DOI: 10.6084/m9.figshare.28405655
title: Data for: Recombination and retroprocessing in broomrapes reveal a universal roadmap for mitochondrial evolution in heterotrophic plants

description: This repository contains Supplementary data for: "Recombination and retroprocessing in broomrapes reveal a universal roadmap for mitochondrial evolution in heterotrophic plants. L., Cai., J.C., Havird, R.K., Jansen." It contains the genome assemblies, annotations, gene alignments, and phylogenies supporting the findings of this study including RNA editing, molecular evolution, and gene transfers.
DOI: 10.6084/m9.figshare.28396016
title: Palliative Care Adversarial Dataset (PCAD)

description: This dataset is shared as part of the study titled: Large language models perpetuate bias in palliative care: development and analysis of the Palliative Care Adversarial Dataset (PCAD). Read on arXiv: https://arxiv.org/abs/2502.08073<b>Note on the dataset</b>The PCAD datasets were developed through an iterative process involving two palliative care physicians (NA and SB), a social scientist with expertise in inequity in palliative care (JD), and a clinician specialising in LLM research (FA). The following examples were used to represent axes of identity: ethnicity (White [reference] vs. Black, Asian, or Hispanic [marginalised]); age (30 years old [reference] vs. &gt;75 years old [marginalised]); and diagnosis (cancer [reference] vs. dementia, liver failure, heart failure, or chronic kidney disease [marginalised]). The complete datasets are provided as supplementary material.The PCAD-Direct dataset included 100 adversarial questions, designed to be concise, direct, and intentionally provocative, often beginning with biased premises reflecting an axis of identity. The goal was to test whether LLMs would challenge these biases. Each of the four care dimensions had 25 questions, of which 15 addressed a single axis of identity and 10 incorporated multiple axes to assess intersectionality (seven with two axes and three with three axes).The PCAD-Counterfactual dataset comprised 84 pairs of clinical scenarios, each paired with a single question based on the concept of counterfactual fairness, which assesses consistency of outcomes when protected attributes (e.g. age, ethnicity) are altered. Each pair included a reference case and a counterfactual case differing only by an axis of identity (age, ethnicity, or diagnosis). The dataset covered four care dimensions with 21 scenarios each: 15 focused on a single axis, and six addressed intersectionality (three with two axes and three with three axes).
DOI: 10.34683/sr352
title: StoneRounds Case: SR352
title: XL Retinitis Pigmentosa

description: StoneRounds Case SR352 was diagnosed with XL Retinitis Pigmentosa likely caused by mutations in the gene: RP2.
DOI: 10.34683/sr487
title: StoneRounds Case: SR487
title: Type 1 Usher Syndrome

description: StoneRounds Case SR487 was diagnosed with Type 1 Usher Syndrome likely caused by mutations in the gene: MYO7A.
DOI: 10.5281/zenodo.14607294
title: Data for Flat_Base simulation described in High-Fidelity Experimental Simulations of Atmospheric Flow near Low-Intensity Fires in a Wildland-Urban Interface

description: Output files for PALM simulations presented in the bottle lake forest WUI fire paper. The preprint is available in the ESS open archive. Data provided here are for the Flat_Base simulation. These data can be used to reproduce results in the paper, and do not cover the entire simulation (raw data more than 10 TB). For those interested in the raw files, more data can be shared upon request to the corresponding author.
DOI: 10.5281/zenodo.14607295
title: Data for Flat_Base simulation described in High-Fidelity Experimental Simulations of Atmospheric Flow near Low-Intensity Fires in a Wildland-Urban Interface

description: Output files for PALM simulations presented in the bottle lake forest WUI fire paper. The preprint is available in the ESS open archive. Data provided here are for the Flat_Base simulation. These data can be used to reproduce results in the paper, and do not cover the entire simulation (raw data more than 10 TB). For those interested in the raw files, more data can be shared upon request to the corresponding author.
DOI: 10.5281/zenodo.14607469
title: Data for Flat_Fire simulation described in High-Fidelity Experimental Simulations of Atmospheric Flow near Low-Intensity Fires in a Wildland-Urban Interface

description: Output files for PALM simulations presented in the bottle lake forest WUI fire paper. The preprint is available in the ESS open archive. Data provided here are for the Flat_Fire simulation. These data can be used to reproduce results in the paper, and do not cover the entire simulation (raw data more than 10 TB). For those interested in the raw files, more data can be shared upon request to the corresponding author.
DOI: 10.5281/zenodo.14862042
title: DYUSHEN MIOPATIYA
DOI: 10.5281/zenodo.14862043
title: DYUSHEN MIOPATIYA
DOI: 10.6084/m9.figshare.28405694
title: Foclóir Tráchtais v1.2

description: Is foclóir ríomheolaíochta é an Foclóir Tráchtas curtha le chéile ag Seathrún (Jeffrey) Sardina dá thráchtas PhD. Cruthaíodh é chun téarmaí ríomheolaíochta nach raibh ar fáil i bhfoclóirí eile a chur ar fáil.
DOI: 10.5281/zenodo.14862044
title: QISHLOQDAGI VA SHAHARDAGI AYOLLARDA MIOMA RIVOJLANISHINING FARQI
DOI: 10.5281/zenodo.14862045
title: QISHLOQDAGI VA SHAHARDAGI AYOLLARDA MIOMA RIVOJLANISHINING FARQI
DOI: 10.5281/zenodo.13785501
title: Acoustic and behavioral strategies of dolphins competing with artisanal fisheries in the Southern Gulf of Mexico Data Set

description: Behavioral and acoustic plasticity of bottlenose dolphins allow them to explore a variety of habitats and to develop strategies to overcome the increasingly demanding anthropogenic pressures. Bottlenose dolphins are known to compete with artisanal fishing along the southwestern coast of the Gulf of Mexico, but the extent of marine traffic impact on the dolphins is unknown. We investigated dolphin behavioral dynamics through unmanned aerial vehicles (UAV) and acoustic recordings in two zones off Alvarado, Veracruz, Mexico, with high (HVP) and low-vessel presence (LVP). Our results show that at the HVP-zone, located at the mouth of the Alvarado lagoon and with a greater abundance of prey, dolphins focus their behavioral budget on feeding, with higher emission rates of echolocation trains. Conversely, at the LVP-zone, which is located northwest and southeast of the lagoon mouth, their behavioral repertoire is more varied (dolphins move, feed, socialize, and rest equally), and they emit not only large amounts of echolocation trains, but also whistles at higher emission rates. Our findings suggest a zoning strategy through a compensatory mechanism that has allowed dolphins to develop a level of tolerance to fishing activities and marine traffic within their feeding areas, by reducing the size of their groups (and individual interactions) while prioritizing acoustic and surface behavior when in presence of vessels. By using this trade-off strategy, dolphins may remain at the site and continue taking advantage of the resources, at the expense of long-term effects, which remain to be investigated.
DOI: 10.5281/zenodo.14733921
title: Human Diversity Reference (DivRef)

description: Human diversity reference (DivRef) bundleThis resource bundle contains a custom human diversity reference (DivRef) composed of short base sequences around common variation in the human population, with a tool for remapping coordinates from this custom reference back to GRCh38.DivRef is constructed by computing empirical phased haplotypes within 25 BPs over 0.5% allele frequency from the Human Genome Diversity Panel (HGDP) using the phased Hail dataset provided by the gnomAD team at the Broad Institute, merged with single variants over 0.5% AF from the gnomAD v4.1.0 summary release. The base context including and surrounding these variants and haplotypes is generated from the GRCh38 reference sequence, and each variant and haplotype is exported to a FASTA file.These FASTA files are intended to be used with tools for guide design and off-target nomination that already accept reference sequences as FASTA files. The haplotype-only version of the resource contains 1,795,661 sequences overlapping 2+ variants. The gnomAD + HGDP merge contains 36,343,619 sequences including single variants and haplotypes.

From the team at E9 Genomics.
DOI: 10.5281/zenodo.13785500
title: Acoustic and behavioral strategies of dolphins in relation to fishing vessel traffic in the Southern Gulf of Mexico Data Set

description: Behavioral and acoustic plasticity of bottlenose dolphins allow them to explore a variety of habitats and to develop strategies to overcome the increasingly demanding anthropogenic pressures. Bottlenose dolphins are known to compete with artisanal fishing along the southwestern coast of the Gulf of Mexico, but the extent of marine traffic impact on the dolphins is unknown. We investigated dolphin behavioral dynamics through unmanned aerial vehicles (UAV) and acoustic recordings in two zones off Alvarado, Veracruz, Mexico, with high (HVP) and low-vessel presence (LVP). Our results show that at the HVP-zone, located at the mouth of the Alvarado lagoon and with a greater abundance of prey, dolphins focus their behavioral budget on feeding, with higher emission rates of echolocation trains. Conversely, at the LVP-zone, which is located northwest and southeast of the lagoon mouth, their behavioral repertoire is more varied (dolphins move, feed, socialize, and rest equally), and they emit not only large amounts of echolocation trains, but also whistles at higher emission rates. Our findings suggest a zoning strategy through a compensatory mechanism that has allowed dolphins to develop a level of tolerance to fishing activities and marine traffic within their feeding areas, by reducing the size of their groups (and individual interactions) while prioritizing acoustic and surface behavior when in presence of vessels. By using this trade-off strategy, dolphins may remain at the site and continue taking advantage of the resources, at the expense of long-term effects, which remain to be investigated.
DOI: 10.5281/zenodo.14862051
title: Acoustic and behavioral strategies of dolphins in relation to fishing vessel traffic in the Southern Gulf of Mexico Data Set

description: Behavioral and acoustic plasticity of bottlenose dolphins allow them to explore a variety of habitats and to develop strategies to overcome the increasingly demanding anthropogenic pressures. Bottlenose dolphins are known to compete with artisanal fishing along the southwestern coast of the Gulf of Mexico, but the extent of marine traffic impact on the dolphins is unknown. We investigated dolphin behavioral dynamics through unmanned aerial vehicles (UAV) and acoustic recordings in two zones off Alvarado, Veracruz, Mexico, with high (HVP) and low-vessel presence (LVP). Our results show that at the HVP-zone, located at the mouth of the Alvarado lagoon and with a greater abundance of prey, dolphins focus their behavioral budget on feeding, with higher emission rates of echolocation trains. Conversely, at the LVP-zone, which is located northwest and southeast of the lagoon mouth, their behavioral repertoire is more varied (dolphins move, feed, socialize, and rest equally), and they emit not only large amounts of echolocation trains, but also whistles at higher emission rates. Our findings suggest a zoning strategy through a compensatory mechanism that has allowed dolphins to develop a level of tolerance to fishing activities and marine traffic within their feeding areas, by reducing the size of their groups (and individual interactions) while prioritizing acoustic and surface behavior when in presence of vessels. By using this trade-off strategy, dolphins may remain at the site and continue taking advantage of the resources, at the expense of long-term effects, which remain to be investigated.
DOI: 10.5281/zenodo.14733920
title: Human Diversity Reference (DivRef)

description: Human diversity reference (DivRef) bundle

This resource bundle contains a custom human diversity reference (DivRef) composed of short base sequences around common variation in the human population, with a tool for remapping coordinates from this custom reference back to GRCh38.DivRef is constructed by computing empirical phased haplotypes within 25 BPs over 0.5% allele frequency from the Human Genome Diversity Panel (HGDP) using the phased Hail dataset provided by the gnomAD team at the Broad Institute, merged with single variants over 0.5% AF from the gnomAD v4.1.0 summary release. The base context including and surrounding these variants and haplotypes is generated from the GRCh38 reference sequence, and each variant and haplotype is exported to a FASTA file. These FASTA files are intended to be used with tools for guide design and off-target nomination that already accept reference sequences as FASTA files.

From the team at E9 Genomics.

 

Changelog:







v1.1 (2025/02/12)



Updated haplotype filtering algorithm to improve discovery of haplotypes <= 1% AF, which added ~200k haplotypes.

Fixed bug in `remap_divref.py` script
DOI: 10.5281/zenodo.14802613
title: Human Diversity Reference (DivRef)

description: Human diversity reference (DivRef) bundle

This resource bundle contains a custom human diversity reference (DivRef) composed of short base sequences around common variation in the human population, with a tool for remapping coordinates from this custom reference back to GRCh38.DivRef is constructed by computing empirical phased haplotypes within 25 BPs over 0.5% allele frequency from the Human Genome Diversity Panel (HGDP) using the phased Hail dataset provided by the gnomAD team at the Broad Institute, merged with single variants over 0.5% AF from the gnomAD v4.1.0 summary release. The base context including and surrounding these variants and haplotypes is generated from the GRCh38 reference sequence, and each variant and haplotype is exported to a FASTA file. These FASTA files are intended to be used with tools for guide design and off-target nomination that already accept reference sequences as FASTA files.

From the team at E9 Genomics.

 

Changelog:







v1.1 (2025/02/12)



Updated haplotype filtering algorithm to improve discovery of haplotypes <= 1% AF, which added ~200k haplotypes.

Fixed bug in `remap_divref.py` script
DOI: 10.34740/kaggle/dsv/10736799
title: cypto_data
DOI: 10.5281/zenodo.14858705
title: vocalimitationset in WebDataset Format

description: This dataset is the vocal imitation set, formatted in the WebDataset format. WebDataset files are essentially tar archives, where each example in the dataset is represented by a pair of files: a WAV audio file and a corresponding JSON metadata file. The JSON file contains the class label and other relevant information for that particular audio sample.

$ tar tvf fold00_0000000.tar|head                                                                         ✔ 
-r--r--r-- bigdata/bigdata  76 2025-01-13 14:07 117Music_Musical instrument_Percussion_Wood block-6522746431340544.json
-r--r--r-- bigdata/bigdata 450604 2025-01-13 14:07 117Music_Musical instrument_Percussion_Wood block-6522746431340544.wav
-r--r--r-- bigdata/bigdata     60 2025-01-13 14:07 024Animal_Wild animals_Frog_Croak-5747610597982208.json
-r--r--r-- bigdata/bigdata 892972 2025-01-13 14:07 024Animal_Wild animals_Frog_Croak-5747610597982208.wav
-r--r--r-- bigdata/bigdata     91 2025-01-13 14:07 282Source-ambiguous sounds_Deformable shell_Crumpling_ crinkling-6533838721253376.json
-r--r--r-- bigdata/bigdata 319532 2025-01-13 14:07 282Source-ambiguous sounds_Deformable shell_Crumpling_ crinkling-6533838721253376.wav
-r--r--r-- bigdata/bigdata     65 2025-01-13 14:07 063Human sounds_Human voice_Wail_ moan-4839157100707840.json
-r--r--r-- bigdata/bigdata 311340 2025-01-13 14:07 063Human sounds_Human voice_Wail_ moan-4839157100707840.wav
-r--r--r-- bigdata/bigdata     86 2025-01-13 14:07 176Sounds of things_Domestic sounds_ home sounds_Door_Knock-5671984008527872.json
-r--r--r-- bigdata/bigdata 778284 2025-01-13 14:07 176Sounds of things_Domestic sounds_ home sounds_Door_Knock-5671984008527872.wav

 

$ cat Animal_Wild\ animals_Frog_Croak-5747610597982208.json
{"imitation": "024Animal_Wild animals_Frog_Croak_reference"}
DOI: 10.5281/zenodo.14862071
title: Acoustic and behavioral strategies of dolphins in relation to fishing vessel traffic in the Southern Gulf of Mexico-Dataset

description: Behavioral and acoustic plasticity allow cetaceans to exploit a variety of habitats developing strategies to overcome increasingly demanding anthropogenic pressures. Bottlenose dolphins are known to compete with artisanal fishing along the southwestern coast of the Gulf of Mexico, but the extent of marine traffic impacts on the species is unknown. We investigated dolphin behavioral dynamics through unmanned aerial vehicles (UAV) and acoustic recordings in two zones off Alvarado, Veracruz, Mexico, with high (HVP) and low-vessel presence (LVP). Within the HVP-zone (at the mouth of a lagoon) known for its greater abundance of prey, dolphins focused their behavioral budget on feeding (mostly individually), with higher emission rates for echolocation trains. Conversely, at the LVP-zone (located northwest and southeast of the lagoon mouth), groups were larger and their behavioral repertoire was more varied (dolphins traveled, fed, socialized, and rested equally), emitting not only high emission rates for echolocation trains, but also for whistles. Our findings suggest that dolphins have developed a zoning strategy through a compensatory mechanism that allows tolerance to a certain level of fishing activities and marine traffic, especially within their feeding areas, by reducing group size to individual interactions, while prioritizing certain surface and acoustic behavior when in the presence of vessels. By using this trade-off strategy, dolphins may remain at the site and continue taking advantage of the resources, at the expense of potential long-term effects, which remain to be investigated.