cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3539593
title: Compilation of data used to implement floodplain DEM algorithm in the Logone Floodplain

description: This document describes the dataset that was used in the article submitted to Geophysical Research Letters by Shastry and Durand entitled "Water Surface Elevation Constraints in a Data Assimilation Scheme to Infer Floodplain Topography: A Case Study in the Logone Floodplain". The dataset is distributed as a NetCDF file containing the Digital Elevation Models at different stages of the algorithm described in the article, and a set of excel files describing the location coordinates of flood boundaries used in the study. <strong>Description of Files</strong> <strong>Excel files</strong><br> Each excel file provides the location coordinates of flood boundaries on a particular day; the date is mentioned in the file name as YYYYMMDD. Each Sheet is each excel file corresponds to a unique flooded region on the particular day. The first column corresponds to Northing and the second Easting. The coordinates are in the WGS 1984 UTM Zone 33 N coordinate system. <strong>NetCDF file</strong><br> This file contains Digital Elevation Models (DEMs) at various stages of the algorithm. The various stages are described below.<br> 1. The Prior DEM: Multi-Error-Removed Improved-Terrain (MERIT) DEM (Yamazaki et al., 2017; http://hydro.iis.u-tokyo.ac.jp/~yamadai/MERIT_DEM/) of the Logone Floodplain in Cameroon upscaled to 500 m.<br> 2. Ensemble of particle DEMs: Spatially correlated errors added to the prior DEM to produce an ensemble of 50 particles.<br> 3. Channel smoothed ensemble of particles: The elevations of the river network smoothed in the ensemble of particles in 2.<br> 4. Flood boundary smoothed ensemble of particles: The elevations along flood boundaries provided in the excel files smoothed in the ensemble mentioned in 3.<br> 5. Water surface constrained ensemble: A water surface constraint is applied to the ensemble in 4 to produce the ensemble that goes into the particle batch smoother described in the article. <strong>Reference:</strong> Yamazaki, D., Ikeshima, D., Tawatari, R., Yamaguchi, T., O’Loughlin, F., Neal, J. C., Bates, P. D. (2017). A high-accuracy map of global terrain elevations. <em>Geophysical Research Letters</em>, 44 (11), 5844–5853. doi: 10.1002/2017GL072874
DOI: 10.3886/e115488
title: Replication files for "Pareto Improvements from Lexus Lanes: The Effects of Pricing a Portion of the Lanes on Congested Highways"

description: Though economists have long advocated road pricing as an efficiency-enhancing solution to traffic congestion, it has rarely been implemented, primarily because it is thought to create losers as well as winners. This paper shows that a judiciously designed toll applied to a portion of the lanes of a highway can generate a Pareto improvement before using the revenue, a sufficient condition being that drivers with a high value of time travel at the peak of rush hour. I obtain these new theoretical results by extending a standard dynamic congestion model to reflect an important additional traffic externality: extra traffic does not simply increase travel times, but also introduces frictions that reduce throughput. The analysis draws attention to a practical policy that may help overcome the widespread opposition to road pricing.<br>
DOI: 10.3886/e115489
title: Replication files for "Tolling Roads to Improve Reliability"

description: A significant cost of traffic congestion is unreliable travel times. A major source of this unreliability is that when roads are congested, interactions between drivers can lead to capacity unexpectedly falling. For example, collisions can close lanes and aggressive lane changers can slow traffic. This paper analyzes how tolls should be set when accounting for such endogenous reliability. We find tolls should be higher and maximum flow lower than we might naïvely expect; and that such tolls make homogeneous drivers better off, even before the toll revenue is used. Simulations suggest the socially optimal maximum departure rate is 15% below that which maximizes expected throughput, and that tolling reduces private costs by almost 10%.
DOI: 10.3886/e115489v1
title: Replication files for "Tolling Roads to Improve Reliability"

description: A significant cost of traffic congestion is unreliable travel times. A major source of this unreliability is that when roads are congested, interactions between drivers can lead to capacity unexpectedly falling. For example, collisions can close lanes and aggressive lane changers can slow traffic. This paper analyzes how tolls should be set when accounting for such endogenous reliability. We find tolls should be higher and maximum flow lower than we might naïvely expect; and that such tolls make homogeneous drivers better off, even before the toll revenue is used. Simulations suggest the socially optimal maximum departure rate is 15% below that which maximizes expected throughput, and that tolling reduces private costs by almost 10%.
DOI: 10.17632/zks55np96k.1
title: Data for: Secondary sympatry after allopatric divergence explains avian speciation and high species diversity in the Himalayas-Hengduan mountains

description: Gene sequences for the studied four sister bird pairs in the present study.
DOI: 10.26300/7m60-wc96
title: COSMAHA Phase 2
DOI: 10.26300/cg4t-sv98
title: Outcome data reported in Cochrane Eyes and Vision reviews
DOI: 10.26300/r3g3-cy03
title: CEV SNA
DOI: 10.26300/ykks-2j61
title: Assessing the reliability of Cornea SRs
DOI: 10.5281/zenodo.3530894
title: FA test

description: test upload of FA data
DOI: 10.5281/zenodo.3530895
title: FA test

description: test upload of FA data
DOI: 10.5281/zenodo.3539625
title: weecology/PortalData 1.140.0

description: Official Repo of the Portal Project Data
DOI: 10.17632/njgmkh97w4.1
title: Data for: Underwater De-scattering Imaging by Laser Field Synchronous Scanning

description: The raw images extracted for video is in "raw_images.zip", the image filename indicates the imaging method used and under what turbidity of water. The compressed video at 33.89 FTU is in "video at 33.89FTU.zip". The raw data of figure 12, 13, 14, 16, and 17 is in "RawData_for_figures.zip".
DOI: 10.17632/vcctjhnwtp.1
title: Data for: Advancing Santorini’s tephrostratigraphy: new glass geochemical data and improved marine-terrestrial tephra correlations for the past ~360 kyrs

description: Supplementary material S2: EPMA glass data of Santorini proximal tephra deposits analysed in this study. Supplementary material S3: EPMA glass data of marine tephras from cores KL49 and KL51 (Schwarz, 2000), and LC21 (Satow et al., 2015, in review). Supplementary material S4: Age-depth models for marine cores M40/4-65 (KL49) and M40/4-67 (KL51).
DOI: 10.18112/openneuro.ds002316.v1.0.0
title: rewardBeast
DOI: 10.5281/zenodo.3540378
title: Data for Cloud resolving WRF simulations of precipitation and soil moisture over the central Tibetan Plateau: an assessment of various physics options

description: This dataset accompanies the submitted paper in the Earth and Space Science:Cloud resolving WRF simulations of precipitation and soil moisture over the central Tibetan Plateau: an assessment of various physics options.
DOI: 10.5281/zenodo.3540379
title: Data for Cloud resolving WRF simulations of precipitation and soil moisture over the central Tibetan Plateau: an assessment of various physics options

description: This dataset accompanies the submitted paper in the Earth and Space Science:Cloud resolving WRF simulations of precipitation and soil moisture over the central Tibetan Plateau: an assessment of various physics options.
DOI: 10.5519/qd.qmsx60o5
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (180 records)
DOI: 10.17632/7znhfjxdbt.1
title: Data for: Is the Remedy Worse Than the Disease? The Impact of Teacher Remediation on Teacher and Student Performance in Chile

description: Replication files for "Is the Remedy Worse than the Disease? The Impact of Teacher Remediation on Teacher and Student Performance in Chile"
DOI: 10.5281/zenodo.1457821
title: Generation and Fate of Near-Inertial Waves in a Baroclinic Current on the Tasmanian Shelf

description: Dataset associated with published JPO manuscript: 10.1175/jpo-d-18-0208.1.
DOI: 10.5281/zenodo.1457822
title: Generation and Fate of Near-Inertial Waves in a Baroclinic Current on the Tasmanian Shelf

description: Dataset associated with published JPO manuscript: 10.1175/jpo-d-18-0208.1.
DOI: 10.17632/vwwn62wt3f.1
title: Data for: Green Synthesis of Fluorescent Ag-Anionic Polyacrylamide Nanoparticles Gels Solution with High Stability via a Simple Template Method

description: The research data included 5 graphs.The schematic diagram of the synthesis of Ag-APAM NPs gels solution was shown in Fig. 1. Figure 2 shown the morphologies of Ag-APAM NPs gels solution (a, b), the photos of Ag-APAM NPs gels solution under the daylight lamp (c) and the UV lamp (d), EDAX spectrum (e) and Ag element mapping (f) of Ag-APAM NPs gel.SEM images of Ag-APAM NPs gel obtained after freeze-drying the solution with 25 µM APAM were shown in Fig. 3(a) and (b) and Fig.3(c,d) shown TEM images of Ag-APAM NPs gels solution prepared with 25 µM APAM under different magnifications.As shown in Fig. 4,we could obtain the average pore diameter of Ag-APAM NPs gels solution is about 62.8 nm according to the nitrogen adsorption-desorption isotherm.Finally, Fig. 5 was UV-vis spectra (a) and fluorescence spectra (b) of Ag-APAM NPs gels solution with different APAM concentrations.
DOI: 10.5519/qd.kqoin4c7
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4475301 records)
DOI: 10.6073/pasta/4af096f1d8b601e56f338b04f1bca58e
title: MCR LTER: Data from Duvall, Rosman and Hench, in review. Representation of coral reef roughness using obstacle and surface-based approaches, submitted to JGR: Oceans

description: This archive contains natural coral reef topography data from the northern coast of Mo’orea, French Polynesia. These data were used to compute reef roughness density using obstacle- and surface-based estimates and models, and to compare the two approaches for representing reef topography. This material is based upon work supported by the U.S. National Science Foundation under Grant No. OCE 16-37396 (and earlier awards) as well as a generous gift from the Gordon and Betty Moore Foundation. Research was completed under permits issued by the French Polynesian Government (Délégation à la Recherche) and the Haut-commissariat de la République en Polynésie Francaise (DTRT) (Protocole d'Accueil 2005-2019). This work represents a contribution of the Moorea Coral Reef (MCR) LTER Site.
DOI: 10.25911/5dcb3e4b6a171
title: Experimental investigation into the strength and behaviour of asperities during seismic slip

description: This data is provided in support of a manuscript titled 'Rheological Controls on Asperity Weakening During Earthquake Slip'.
description: This data is provided in support of a manuscript titled 'Rheological Controls on Asperity Weakening During Earthquake Slip'. Experiments were undertaken using a Paterson gas medium triaxial deformation apparatus. This apparatus has an internal load cell and furnace. Displacement data is collected using an LVDT and a laser interferometer. Starting material is Fontainebleau Sandstone. Mechanical data has been corrected for elastic response of apparatus, the strength component of the jacket and the change in contact area.
DOI: 10.7910/dvn/ahfinm/4tobfz
title: ACCESS Wave 2 questionnaire - 2018.pdf

description: ACCESS 2018 questionnaire
DOI: 10.7910/dvn/ahfinm/inbhhr
title: CEEW - ACCESS20152018 Merged.tab

description: Combined ACCESS 2015 and ACCESS 2018 (wide)
DOI: 10.7910/dvn/ahfinm/p1abwa
title: CEEW - ACCESS20152018 Appended.tab

description: Combined ACCESS 2015 and ACCESS 2018 (long)
DOI: 10.7910/dvn/ahfinm/weehdp
title: CEEW - ACCESS2018.tab

description: ACCESS 2018 data (cross-section)
DOI: 10.3886/e111565v1-19545
title: Understanding gender gap further

description: To better understand the historical gender wage gap, we investigate the wages of Swedish compositors circa 1900 using a rich dataset of matched employer-employee information with national coverage. In line with previous findings, women earned about 70 percent of men’s wages on average. Individual and job characteristics explain much of this shortfall. Firm characteristics or firm fixed effects on average explain 17 percent of the gap, though the firm mattered more for the gender gap in big cities than elsewhere. Sorting across firms is thus an important part of understanding historical gender wage gaps. While most studies conclude that a significant portion of the gender gap is unexplained, suggesting labor market discrimination, this may result from a lack of information on the distribution of men and women across firms. <br>
description: Undersökning av tryckerier mm 1903, Avdelningen för arbetsstatistik, HII a:1 vol 1-6 samt HII a:2 vol 1-12, Kommerskollegiets arkiv, National Archives (Riksarkivet), Stockholm. <br>
DOI: 10.5281/zenodo.3540422
title: Tox21 dataset backup

description: Dataset backup for computational experiments in the paper: "Ranking Molecules with Vanishing Kernels and a Single Parameter:<br> Applicability Domain Included" Berenger, F. and Yamanishi, Y. Data source https://github.com/deepchem/deepchem/tree/master/datasets/tox21.csv download date: 09/11/2018 at 13:59:05 Preparation protocol All smiles strings (molecules) have been standardised using https://github.com/flatkinson/standardiser Molecules that did not pass standardisation have been removed. Cf. standardisation/errors.smi for such molecules. All molecules tested on a given toxicity endpoint/target were copied into a specific directory for that target. All toxic molecules for a given target have had their name prefixed with the word "active". Each list of molecules was randomized. Directory structure <pre><code>tox21.csv: backup copy of the original data source targets.txt: list of all toxicity endpoints in the dataset; one per line. Target names are in the same order than columns in the tox21.csv file. TARGET/ligands_std_rand.smi: all toxic molecules for TARGET and all non toxic molecules; in random order standardisation/errors.smi: molecules that did not pass standardisation standardisation/standardised.smi: molecules that passed standardisation </code></pre> Bibliography <pre><code>@article{Huang2016, author = {Huang, Ruili and Xia, Menghang and Nguyen, Dac-Trung and Zhao, Tongan and Sakamuru, Srilatha and Zhao, Jinghua and Shahane, Sampada A. and Rossoshek, Anna and Simeonov, Anton}, title = {Tox21Challenge to Build Predictive Models of Nuclear Receptor and Stress Response Pathways as Mediated by Exposure to Environmental Chemicals and Drugs}, journal = {Frontiers in Environmental Science}, volume = {3}, pages = {85}, year = {2016}, doi = {10.3389/fenvs.2015.00085}, } </code></pre>
description: {"references": ["Huang, R., Xia, M., Nguyen, D. T., Zhao, T., Sakamuru, S., Zhao, J., ... & Simeonov, A. (2016). Tox21Challenge to build predictive models of nuclear receptor and stress response pathways as mediated by exposure to environmental chemicals and drugs. Frontiers in Environmental Science, 3, 85."]}
DOI: 10.5281/zenodo.3540423
title: Tox21 dataset backup

description: Dataset backup for computational experiments in the paper: "Ranking Molecules with Vanishing Kernels and a Single Parameter:<br> Applicability Domain Included" Berenger, F. and Yamanishi, Y. Data source https://github.com/deepchem/deepchem/tree/master/datasets/tox21.csv download date: 09/11/2018 at 13:59:05 Preparation protocol All smiles strings (molecules) have been standardised using https://github.com/flatkinson/standardiser Molecules that did not pass standardisation have been removed. Cf. standardisation/errors.smi for such molecules. All molecules tested on a given toxicity endpoint/target were copied into a specific directory for that target. All toxic molecules for a given target have had their name prefixed with the word "active". Each list of molecules was randomized. Directory structure <pre><code>tox21.csv: backup copy of the original data source targets.txt: list of all toxicity endpoints in the dataset; one per line. Target names are in the same order than columns in the tox21.csv file. TARGET/ligands_std_rand.smi: all toxic molecules for TARGET and all non toxic molecules; in random order standardisation/errors.smi: molecules that did not pass standardisation standardisation/standardised.smi: molecules that passed standardisation </code></pre> Bibliography <pre><code>@article{Huang2016, author = {Huang, Ruili and Xia, Menghang and Nguyen, Dac-Trung and Zhao, Tongan and Sakamuru, Srilatha and Zhao, Jinghua and Shahane, Sampada A. and Rossoshek, Anna and Simeonov, Anton}, title = {Tox21Challenge to Build Predictive Models of Nuclear Receptor and Stress Response Pathways as Mediated by Exposure to Environmental Chemicals and Drugs}, journal = {Frontiers in Environmental Science}, volume = {3}, pages = {85}, year = {2016}, doi = {10.3389/fenvs.2015.00085}, } </code></pre>
description: {"references": ["Huang, R., Xia, M., Nguyen, D. T., Zhao, T., Sakamuru, S., Zhao, J., ... & Simeonov, A. (2016). Tox21Challenge to build predictive models of nuclear receptor and stress response pathways as mediated by exposure to environmental chemicals and drugs. Frontiers in Environmental Science, 3, 85."]}
DOI: 10.5281/zenodo.3540442
title: 2D STORM dataset U2OS Nup96-SNAP A647 (Au Fid)

description: 2D STORM dataset sample: U2OS Nup96-SNAP cells labelled with A647 imaging: STORM, COT buffer, pxlsize 106 nm drift correction: Au fiducials 100 nm Cells from: Thevathasan, J.V., Kahnwald, M., Cieśliński, K. <em>et al.</em> Nuclear pores as versatile reference standards for quantitative superresolution microscopy. <em>Nat Methods</em> <strong>16, </strong>1045–1053 (2019) doi:10.1038/s41592-019-0574-9
DOI: 10.14469/hpc/6291
title: tetrodotoxin, zwitterionic form 1 (Woodward form) optrot = -41.98

description: Gaussian Calculation
DOI: 10.5281/zenodo.3540509
title: Pilot data from the PeerCorps-CIPCS Nzega Pilot Injury Survey

description: Anonymized trauma survey data from the Nzega District Hospital.
DOI: 10.5281/zenodo.3540508
title: Pilot data from the PeerCorps-CIPCS Nzega Pilot Injury Survey

description: Anonymized trauma survey data from the Nzega District Hospital.
DOI: 10.14469/hpc/6292
title: tetrodotoxin, neutral form 3 iso G=-1195.339160 optrot = -30.36

description: Gaussian Calculation
DOI: 10.14469/hpc/6293
title: tetrodotoxin, zwitterionic form 2 G=-1195.305601 DM=14.6 optrot = 11.03

description: Gaussian Calculation
DOI: 10.6073/pasta/281c4942e95e9f3246ca67203ec081d0
title: Soil-Adjusted Vegetation Index (SAVI) derived from 2015 National Agriculture Imagery Program (NAIP) data for the central Arizona region

description: This project calculates the Soil-adjusted Vegetation Index (SAVI) from 2015 National Agriculture Imagery Program (NAIP) imagery (1-meter resolution) for the central Arizona region. Because of their large size, data (as GeoTIFF files) for each survey year are provided as multiple individual tiles each comprising a portion of the overall coverage area. An index of the relative position of each tile in the coverage area is provided as a pdf and kml where the tile index contains a portion of the GeoTIFF file name (e.g., the relative position of the data file NAIP_SAVI_CAP2015-0000000000-0000000000.tif to the overall coverage area is identified by the index id 0000000000-0000000000 in the pdf and kml index maps). Javascript code used to process SAVI values is included with this dataset.
DOI: 10.14469/hpc/6294
title: tetrodotoxin, neutral form 4 G= -1195.336249 DM=6.0 optrot = 18.82

description: Gaussian Calculation
DOI: 10.14469/hpc/6295
title: tetrodotoxin, neutral form 5 G=-1195.332469 DM=6.5 optrot = -56.25

description: Gaussian Calculation
DOI: 10.23708/rkotnr
title: Soil carbon content, bulk densities, allophane and MIRS data on Aquiares Watershed (Costa Rica)

description: Data set used for a paper published in SOIL (2019) Short-range-order minerals as powerful factors explaining deep soil organic carbon stock distribution: the case of a coffee agroforestry plantation on Andosols in Costa Rica. Data comprised : Sheet 1 geographical coordinates, elevation of 72 soil profiles located in the watershed of the Aquiares Farm (1km2) ; Sheet 2: measured data for C content, C:N ratio, oxalate and sodium-pryphosphate extractable forms of Al, Fe and Si ; Sheet 3 : 4 replicates of measured bulk densities on 9 soil profiles; Sheet 4 : Mid infrared spectra of the 598 soil samples from the 72 soil profiles (a,b, c, d, e , f ,g, h are the soil depths; each 10cm from 0 to 200 cm deep). Sheet 5 : predicted values for C content, C stock, bulk densities and oxalate and sodium-pryphosphate extractable forms of Al, Fe and Si ; and belonging to measured and spectral cluster (see the paper in SOIL for explanation)
DOI: 10.17632/cwh9zx895f.1
title: Data for: Search Trends Preceding Increases in Suicide: A Cross-correlation Study with Transfer Function Models of Monthly Google Search Volume and Suicide Rate

description: This is the data used in the cross-correlation analysis between monthly search-volumes of suicide-related search terms and monthly suicide rates in the United States between 2004 and 2017.
DOI: 10.17037/data.00001143
title: Occurrences of Buruli ulcer infections in humans and Mycobacterium ulcerans in animal and environmental samples

description: Dataset containing records of human cases of Buruli ulcer collated through literature review and from surveillance programmes by national control programmes.
description: The surveillance datasets were compiled through routine surveillance for Buruli ulcer in Cameroon, Ghana, Nigeria and Togo. Peer-reviewed literature was identified from searches of PubMed and Web of Science databases, updated on 06/08/2018. Additional publications were identified from reference lists of identified papers. We used the search terms (OR): “Buruli ulcer*”, (“Mycob* AND ulcer*”), “Bairnsdale ulcer”. There were no limits on publication date, study type, or location. We included English, French, and Spanish language publications. Publications were eligible for inclusion if they reported geographical locations with evidence of M. ulcerans infection in humans or animals, or detection of M. ulcerans in animal and environmental samples. There were no limits on publication date, participant population, study type or location. Articles that did not report original data were excluded. Studies that recruited patients from health facilities or used strains of M. ulcerans isolated from clinical samples were included in the evidence consensus framework only if patients’ home addresses were provided. Cases with recorded travel history to several endemic regions were excluded. If a dataset was duplicated in numerous papers, the most comprehensive was included.
DOI: 10.25919/5dcbc73ad9204
title: Parkes observations for project P958 semester 2019OCTS_25

description: Fast radio bursts (FRBs) continue to raise more questions than they answer. Until last year, only one burst – the only one known to repeat - had been localized to a bright radio nebula (either a young supernova remnant or pulsar wind nebulae) in a distant dwarf galaxy. Over the last two year searches with the Australian Square Kilometre Array Pathfinder (ASKAP) have detected 31 bursts, five of which have been localised to host galaxies at redshifts ranging from 0.1 to 0.5. These bursts and their hosts are very unlike the repeater, suggesting there may be a dichotomy in the population. However one of the arcminute-localised ASKAP FRBs has recently been found to repeat. Here we propose to search and study repetitions in this FRB population. Our comprehensive sample and a dense monitoring campaign of well localised bursts, at a fluence limit more than 60 times lower than that of their detections to characterise the fraction of bursts that repeat. For bursts that repeat the unique wide bandwidth observations will be used to test leading models of burst emission.