cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.vv107
title: Data from: Processing of acceleration and dive data on-board satellite relay tags to investigate diving and foraging behaviour in free-ranging marine predators

description: 1. Biologging technologies are changing the way in which the marine
 environment is observed and monitored. However, because device retrieval
 is generally required to access the high resolution data they collect, use
 is generally restricted to those animals that predictably return to land.
 Data abstraction and transmission techniques aim to address this, although
 currently these are limited in scope and do not incorporate, for example,
 acceleration measurements which can quantify animal behaviours and
 movement patterns over fine-scales. 2. In this study, we present a new
 method for the collection, abstraction and transmission of accelerometer
 data from free-ranging marine predators via the Argos satellite system. We
 test run the technique on 20 juvenile southern elephant seals Mirounga
 leonina from the Kerguelen Islands during their first months at sea
 following weaning. Using retrieved archival data from nine individuals
 that returned to the colony, we compare and validate abstracted
 transmissions against outputs from established accelerometer processing
 procedures. 3. Abstracted transmissions included estimates, across five
 segments of a dive profile, of time spent in prey catch attempt (PrCA)
 behaviours, swimming effort and pitch. These were then summarised and
 compared to archival outputs across three dive phases: descent, bottom and
 ascent. Correlations between the two datasets were variable but generally
 good (dependent on dive phase, marginal R2 values of between 0.45 and 0.6
 to &gt; 0.9) and consistent between individuals. Transmitted estimates
 of PrCA behaviours and swimming effort were positively biased to those
 from archival processing. 4. Data from this study represents some of the
 first remotely transmitted quantifications from accelerometers. The
 methods presented and analysed can be used to provide novel insight toward
 the behaviours and movements of free-ranging marine predators, such as
 juvenile southern elephant seals, from whom logger retrieval is
 challenging. Future applications could however benefit from some adaption,
 particularly to reduce positive bias in transmitted PrCA behaviours and
 swimming effort, for which this study provides useful insight.
description: abstractedArchivalComparison_DATAData used for the comparative analyses of the abstracted transmissions and retrieved archives. Abstracted transmissions are those variables named "lowRes_" and retrieved archives are those named "highRes_".
DOI: 10.5061/dryad.4md17
title: Data from: Population and individual identification of Coho Salmon in British Columbia through parentage-based tagging and genetic stock identification: an alternative to coded-wire tags

description: Parentage-based tagging (PBT) and genetic stock identification (GSI) were
 used to identify individual coho salmon (Oncorhynchus kisutch) to specific
 populations and brood years. In total, 20 242 individuals from 117
 populations were genotyped at 304 single nucleotide polymorphisms (SNPs)
 via direct sequencing of amplicons. Coho salmon from 15 populations were
 assigned via parentage analysis that required the genotypes of both
 parents. The overall accuracy of assignment for 1939 coho salmon to the
 correct population was 100%, and to correct brood year within population
 was also 100%. Inclusion of individuals requiring only a single parental
 genotype for identification resulted in assignments of 2101 individuals,
 with an accuracy of 99.95% (2000–2001) to population and 100.0% to age.
 With 23 regions defined by the coded-wire tag (CWT) program, and
 individuals displaying an assignment probability &lt;0.85 excluded
 from the analysis, mean regional assignment accuracy of individuals via
 GSI was 98.4% over all 23 regions. A PBT–GSI or PBT system of
 identification will provide an alternate method of identification in the
 assessment and management of Canadian-origin coho salmon relative to the
 existing CWT program.
description: Coho Baseline Data -
 Genepop FormatGenotypic data for the
 117 population, 302 SNP Baseline Data - genepop format.bco_gene_Sep_22_2016.zip
DOI: 10.5281/zenodo.15527371
title: Predictive Modelling of Cyanobacterial Blooms: Evaluating Climate Scenarios and Management Strategies for Drinking Water Reservoirs

description: This dataset compiles several of the variables used in the construction of PLS-PM models for two reservoirs—A Baxe and Forcadas—located in the Galicia-Costa Hydrographic Demarcation (Galicia, NW Spain). It includes data on stored water volumes, climatic variables, and calculated values of the Trophic State Index (TSI). All variables were collected across multiple sampling dates and locations during the period 2010 to 2021.
description: This research was funded by Grant TED2021-130241A-I00 funded by MCIN/AEI/10.13039/501100011033 and by the European Union NextGenerationEU/PRTR.
DOI: 10.5281/zenodo.15527372
title: Predictive Modelling of Cyanobacterial Blooms: Evaluating Climate Scenarios and Management Strategies for Drinking Water Reservoirs

description: This dataset compiles several of the variables used in the construction of PLS-PM models for two reservoirs—A Baxe and Forcadas—located in the Galicia-Costa Hydrographic Demarcation (Galicia, NW Spain). It includes data on stored water volumes, climatic variables, and calculated values of the Trophic State Index (TSI). All variables were collected across multiple sampling dates and locations during the period 2010 to 2021.
description: This research was funded by Grant TED2021-130241A-I00 funded by MCIN/AEI/10.13039/501100011033 and by the European Union NextGenerationEU/PRTR.
DOI: 10.17632/5dhyv6j3mp
title: Increase and Improvement of Women's Participation in Justice and Security in Guatemala

description: The paper examines the evolution of women's roles in these sectors. Initially, women were relegated to secondary roles; however, thanks to feminist movements and legal reforms, they have achieved greater participation in areas traditionally dominated by men, such as the National Civil Police (PNC), the Army, and the judicial system. Despite these advances, structural and cultural barriers, such as discrimination and gender-based violence, continue to hinder their access to leadership positions. The paper highlights the importance of public policies that promote gender equality and the need to implement effective mechanisms to ensure their proper application. Significant achievements are mentioned, such as the increase in female representation in the judicial system, which rose from 9.6% in 1991 to 42% in 2016, although leadership positions are still mostly held by men. In the case of the PNC, women represent only 8.52% of the personnel, reflecting the limited inclusion of women in security areas. To address these challenges, the article proposes the implementation of policies that promote equal opportunities, including equality training and the creation of safe, harassment-free work environments. It also emphasizes the importance of mentorship and professional training to ensure that women can access leadership roles. The article concludes that, although significant progress has been made, greater commitment is still needed to consolidate the equitable participation of women in the justice and security sectors in Guatemala.
DOI: 10.5061/dryad.2r12j
title: Data from: A new species and introgression in eastern Asian hemlocks (Pinaceae: Tsuga)

description: Species delimitation in Pinaceae is often challenged by limited
 morphological differentiation and introgression. In Tsuga (hemlocks),
 species delimitation has been most challenging among northeastern Asian
 taxa, where the species are weakly marked morphologically and range in
 number from three to five in previous studies. Two low-copy nuclear
 four-coumarase-ligase (4CL) genes andmorphology strongly support a clade
 of the Japanese endemic T. diversifolia and T. sieboldii from Japan and
 Ulleung island (Ulleungdo) in Korea. This clade is here referred to as the
 oceanic hemlocks. 4CL strongly supports a sister-group relationship of the
 widespread northeastern Asian T. chinensis and eastern North American T.
 caroliniana. In contrast, chloroplast genomes, which are markedly reduced
 in Tsuga and relatives, strongly support Japanese T. sieboldii as sister
 to T. chinensis and moderately support T. caroliniana as sister to a clade
 of T. diversifolia and hemlocks fromUlleungdo. These divergent topologies
 suggest chloroplast capture of T. chinensis by Japanese T. sieboldii.
 Ulleungdo hemlocks are distinct from other northeastern Asian species in
 leaf and cone morphology and phenologically in common-garden observations.
 We therefore describe these hemlocks as a new species, T. ulleungensis.
description: Tsuga_in_30iv17needle morphology databaseTsuga__4CL_comb_13vi16_Dryad4CL two loci combinedTsuga__4CL_loci_separate_8vi16_Dryad4CL two loci separateTsuga__cpDNA_8vi16_Dryadwhole chloroplast genomes
DOI: 10.17632/5dhyv6j3mp.1
title: Increase and Improvement of Women's Participation in Justice and Security in Guatemala

description: The paper examines the evolution of women's roles in these sectors. Initially, women were relegated to secondary roles; however, thanks to feminist movements and legal reforms, they have achieved greater participation in areas traditionally dominated by men, such as the National Civil Police (PNC), the Army, and the judicial system. Despite these advances, structural and cultural barriers, such as discrimination and gender-based violence, continue to hinder their access to leadership positions. The paper highlights the importance of public policies that promote gender equality and the need to implement effective mechanisms to ensure their proper application. Significant achievements are mentioned, such as the increase in female representation in the judicial system, which rose from 9.6% in 1991 to 42% in 2016, although leadership positions are still mostly held by men. In the case of the PNC, women represent only 8.52% of the personnel, reflecting the limited inclusion of women in security areas. To address these challenges, the article proposes the implementation of policies that promote equal opportunities, including equality training and the creation of safe, harassment-free work environments. It also emphasizes the importance of mentorship and professional training to ensure that women can access leadership roles. The article concludes that, although significant progress has been made, greater commitment is still needed to consolidate the equitable participation of women in the justice and security sectors in Guatemala.
DOI: 10.5061/dryad.64g86
title: Data from: Comparative transcriptome and lipidome analyses reveal molecular chilling responses in chilling-tolerant sorghums

description: Chilling temperatures (0 to 15°C) are a major constraint for temperate
 cultivation of tropical-origin crops, including the cereal crop sorghum
 (Sorghum bicolor [L.] Moench). Northern Chinese sorghums have adapted to
 early-season chilling, but molecular mechanisms of chilling tolerance are
 unknown. We used RNA sequencing of seedlings to compare the
 chilling-responsive transcriptomes of a chilling-tolerant Chinese
 accession with a chilling-sensitive US reference line, and mass
 spectrometry to compare chilling-responsive lipidomes of four
 chilling-tolerant Chinese accessions with two US reference lines.
 Comparative transcriptomics revealed chilling-induced up-regulation of
 cold-response regulator C-repeat binding factor (CBF) transcription factor
 and genes involved in reactive oxygen detoxification, jasmonic acid (JA)
 biosynthesis, and lipid remodeling phospholipase Dα1 (PLDα1) gene in the
 chilling-tolerant Chinese line. Lipidomics revealed conserved
 chilling-induced increases in lipid unsaturation, as well as lipid
 remodeling of photosynthetic membranes that is specific to
 chilling-tolerant Chinese accessions. Our results point to CBF-mediated
 transcriptional regulation, galactolipid and phospholipid remodeling, and
 JA as potential molecular mechanisms underlying chilling adaptation in
 Chinese sorghums. These molecular systems underlying chilling response
 could be targeted in molecular breeding for chilling tolerance.
description: Differentially expressed
 genes in NSZ and BTx623List of deferentially
 expressed genes between BTx623 and NSZ subjected to chilling and optimal
 temperature treatmentsTranscriptome Analysis -
 Differentially Expressed
 Genes.zipLipidome of US and
 Chinese sorghum accessionsSeedling lipid profile
 of US (BTx623 and RTx430) and Chinese (Niu Shenz Zui, Kaoliang, Hong Ke
 Zi, and Shan Qui Red) accessions subjected to optimal and chilling
 temperaturesLipidome.zipMapMan Analysis - Chilling Stress PathwaysMapMan analysis of BTx623 and NSZ seedling transcriptome subjected to chilling and optimal temperature.MapMan Chilling Stress Pathways.zipTranscriptome HTSeq CountsHTSeq counts data of BTx623 and NSZ seedlings subjected to chilling and optimal temperatures individually. RNA-Seq reads were aligned to sorghum reference genome v3.1US and Chinese accessions metabolome dataMetabolome data of BTx623, HKZ, and Kaoliang accessions under optimal and chilling temperatures.BTx623 and NSZ Chilling Tolerance ScoreField evaluation of BTx623 and NSZ for seedling chilling tolerance in Ashland Bottoms, KS during 2016.
DOI: 10.17632/ysr7p2p379
title: Textural and Sediment Component Dataset of Unconsolidated Sediments from south Andaman and Swaraj Dweep

description: Andaman and Nicobar is group of islands that present along the Bay of Bengal on the western side and the Andaman Sea on the eastern side. This is the location of one of the major modern carbonate systems in India. Here fringing coral reefs surround the islands. In this study, we analyzed unconsolidated sediments collected from the southern Andaman and Swaraj Dweep shallow margins (Upto 15 m), which are part of the Andaman and Nicobar Islands. The collected grab samples were wet-sieved and classified into different size fractions. The sediment sizes were categorized into different fractions: gravel (&gt; 2 mm), coarse sand (0.5–2 mm), medium sand (0.25–0.50 mm), fine sand (0.125–0.25 mm), very fine sand (0.063–0.125 mm), and mud (&lt; 0.063 mm). The sand in these areas is primarily composed of biogenic carbonate grains, primarily from coral, coralline algae, mollusks, and foraminifera. Two specific fractions (0.25–0.5 mm and 0.125–0.25 mm) were selected for component analysis. The predominant sediment type falls within the grainstone facies based on the mud percentage. The data are uploaded here as Excel files 1) Grain size data south Andaman 2) Grain size data Swaraj Dweep 3) sediment component from south Andaman (0.25-0.5 mm) 4) sediment component from south Andaman (0.125-0.25 mm) 5) sediment component from Swaraj Dweep (0.25-0.5 mm) 6)sediment component from Swaraj Dweep (0.125-0.25 mm) 7) Facies from south Andaman 8) Facies from Swaraj Dweep.
DOI: 10.17632/ysr7p2p379.1
title: Textural and Sediment Component Dataset of Unconsolidated Sediments from south Andaman and Swaraj Dweep

description: Andaman and Nicobar is group of islands that present along the Bay of Bengal on the western side and the Andaman Sea on the eastern side. This is the location of one of the major modern carbonate systems in India. Here fringing coral reefs surround the islands. In this study, we analyzed unconsolidated sediments collected from the southern Andaman and Swaraj Dweep shallow margins (Upto 15 m), which are part of the Andaman and Nicobar Islands. The collected grab samples were wet-sieved and classified into different size fractions. The sediment sizes were categorized into different fractions: gravel (&gt; 2 mm), coarse sand (0.5–2 mm), medium sand (0.25–0.50 mm), fine sand (0.125–0.25 mm), very fine sand (0.063–0.125 mm), and mud (&lt; 0.063 mm). The sand in these areas is primarily composed of biogenic carbonate grains, primarily from coral, coralline algae, mollusks, and foraminifera. Two specific fractions (0.25–0.5 mm and 0.125–0.25 mm) were selected for component analysis. The predominant sediment type falls within the grainstone facies based on the mud percentage. The data are uploaded here as Excel files 1) Grain size data south Andaman 2) Grain size data Swaraj Dweep 3) sediment component from south Andaman (0.25-0.5 mm) 4) sediment component from south Andaman (0.125-0.25 mm) 5) sediment component from Swaraj Dweep (0.25-0.5 mm) 6)sediment component from Swaraj Dweep (0.125-0.25 mm) 7) Facies from south Andaman 8) Facies from Swaraj Dweep.
DOI: 10.5518/1507
title: Dataset associated with 'Sub-micron Diffractive Optical Elements Facilitated by Intrinsic Deswelling of Auxetic Liquid Crystal Elastomers'

description: Contains AFM profile scans, diffraction angles, diffraction efficiencies of a diffractive optical element made from a liquid crystal elastomer. Includes change in pitch and diffraction efficiency for changes in temperature and strain.
DOI: 10.5061/dryad.9cp00
title: Data from: Across the Indian Ocean: a remarkable example of trans-oceanic dispersal in an austral mygalomorph spider

description: The Migidae are a family of austral trapdoor spiders known to show a
 highly restricted and disjunct distribution pattern. Here, we aim to
 investigate the phylogeny and historical biogeography of the group, which
 was previously thought to be vicariant in origin, and examine the
 biogeographic origins of the genus Moggridgea using a dated multi-gene
 phylogeny. Moggridgea specimens were sampled from southern Australia and
 Africa, and Bertmainus was sampled from Western Australia. Sanger
 sequencing methods were used to generate a robust six marker molecular
 dataset consisting of the nuclear genes 18S rRNA, 28S rRNA, ITS rRNA,
 XPNPEP3 and H3 and the mitochondrial gene COI. Bayesian and Maximum
 Likelihood methods were used to analyse the dataset, and the key dispersal
 nodes were dated using BEAST. Based on our data, we demonstrate that
 Moggridgea rainbowi from Kangaroo Island, Australia is a valid member of
 the otherwise African genus Moggridgea. Molecular clock dating analyses
 show that the inter-specific divergence of M. rainbowi from African
 congeners is between 2.27–16.02 million years ago (Mya). This divergence
 date significantly post-dates the separation of Africa from Gondwana (95
 Mya) and therefore does not support a vicariant origin for Australian
 Moggridgea. It also pre-dates human colonisation of Kangaroo Island, a
 result which is further supported by the intra-specific divergence date of
 1.10–6.39 Mya between separate populations on Kangaroo Island. These
 analyses provide strong support for the hypothesis that Moggridgea
 colonised Australia via long-distance trans-Indian Ocean dispersal,
 representing the first such documented case in a mygalomorph spider.
description: Maximum likelihood
 analysisMaximum likelihood
 analysis was undertaken using RAxML on the BlackBox server for the
 combined six gene, 4118 character, 36 taxa dataset. COI, H3 and XPNPEP3
 partitioned by codons and ITS1, 5.8S, ITS2 and 28S partitioned
 individually, with the GTR + G model used for all genes. This analysis
 resolved the genera Moggridgea and Bertmainius as reciprocally
 monophyletic, with M. rainbowi from KI clearly embedded within the African
 Moggridgea lineage and sister to M. intermedia (bootstrap value 100) (Fig
 1). Furthermore, M. rainbowi formed a monophyletic group, but showed
 phylogeographic structure, with haplotypes reflecting the two geographic
 locations (Western River and American River). The MrBayes analysis of the
 same dataset produced a completely concordant tree.RAxML_tree.pdf
DOI: 10.5061/dryad.c044c
title: Data from: Repeated evolution of vertebrate pollination syndromes in a recently diverged Andean plant clade

description: While specialized interactions, including those involving plants and their
 pollinators, are often invoked to explain high species diversity, they are
 rarely explored at macroevolutionary scales. We investigate the dynamic
 evolution of hummingbird and bat pollination syndromes in the
 centropogonid clade (Lobelioideae: Campanulaceae), an Andean-centered
 group of ∼550 angiosperm species. We demonstrate that flowers hypothesized
 to be adapted to different pollinators based on flower color fall into
 distinct regions of morphospace, and this is validated by morphology of
 species with known pollinators. This supports the existence of pollination
 syndromes in centropogonids, an idea corroborated by ecological studies.
 We further demonstrate that hummingbird pollination is ancestral, and that
 bat pollination has evolved ∼13 times independently, with ∼11 reversals.
 This convergence is associated with correlated evolution of floral traits
 within selective regimes corresponding to pollination syndrome.
 Collectively, our results suggest that floral morphological diversity is
 extremely labile, likely resulting from selection imposed by pollinators.
 Finally, even though this clade's rapid diversification is partially
 attributed to their association with vertebrate pollinators, we detect no
 difference in diversification rates between hummingbird- and
 bat-pollinated lineages. Our study demonstrates the utility of pollination
 syndromes as a proxy for ecological relationships in macroevolutionary
 studies of certain species-rich clades.
description: Lagomarsino_et_al_FloralDataFloral measurements from herbarium specimens and PC loadings used in comparative analyses.Maximum clade credibility treeMCC tree from BEAST analysis of the centropogonid clade; used in phylogenetic PCA and visualization.centropogonids_MCC.trePosterior sample of trees500 trees randomly selected from the posterior distribution of trees from BEAST analysis; used for ancestral state reconstruction and OU analyses.centropogonids_500randomposterior.trenode.state.transitionR code to count number of transitions between pollination syndromes in rayDISC ancestral state reconstruction.Campanulaceae_OUR code for performing OU analyses in OUwie.AIC_weightsR code for calculating AIC weights from OUwie analysis.