cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18745726
title: A LINGUOCULTUROLOGICAL STUDY OF THE WORKS OF OʻTKIR HOSHIMOV

description: This article presents a linguoculturological analysis of the literary works of Oʻtkir Hoshimov, focusing on the interaction between language and culture in his prose. The study examines how culturally marked linguistic units function as carriers of national values, traditions, and collective worldview in Uzbek literature. Special attention is paid to culturally specific vocabulary, phraseological units, everyday lexical items, and character speech as key elements in the construction of the artistic world. The analysis reveals that cultural concepts such as family, respect for elders, moral responsibility, patience, and human dignity are systematically embedded in the language of Hoshimov’s works and are realized through concrete linguistic forms. The findings demonstrate that Hoshimov’s prose serves not only as an artistic expression but also as a cultural document reflecting Uzbek national identity. The article emphasizes the relevance of the linguoculturological approach for interpreting national literature and highlights its role in uncovering implicit cultural meanings encoded in literary texts.
DOI: 10.5281/zenodo.18745727
title: A LINGUOCULTUROLOGICAL STUDY OF THE WORKS OF OʻTKIR HOSHIMOV

description: This article presents a linguoculturological analysis of the literary works of Oʻtkir Hoshimov, focusing on the interaction between language and culture in his prose. The study examines how culturally marked linguistic units function as carriers of national values, traditions, and collective worldview in Uzbek literature. Special attention is paid to culturally specific vocabulary, phraseological units, everyday lexical items, and character speech as key elements in the construction of the artistic world. The analysis reveals that cultural concepts such as family, respect for elders, moral responsibility, patience, and human dignity are systematically embedded in the language of Hoshimov’s works and are realized through concrete linguistic forms. The findings demonstrate that Hoshimov’s prose serves not only as an artistic expression but also as a cultural document reflecting Uzbek national identity. The article emphasizes the relevance of the linguoculturological approach for interpreting national literature and highlights its role in uncovering implicit cultural meanings encoded in literary texts.
DOI: 10.15468/dl.ctmmc4
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Elattoneura leucostigma"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004126-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ymx8cd
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "StateProvince is Tamaulipas",
 "TaxonKey is Galactia"
 ]
}

 The dataset includes 17 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004127-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34847/nkl.55dci89k
title: En-Mig_Collecte données_Eurasien.ne.s_Annie EC

description: Dans le cadre du programme En-Mig, collecte de données personnelles auprès d'Annie eurasienne d'Indochine venue en France. Elle a été accueillie à l'abbaye de Saint-Rambert en Bugey par la FOEFI (Fédération de l’Œuvre de l’Enfance Française d’Indochine). Un entretien a été réalisé par Yves Denéchère le 5 février 2018.
DOI: 10.34847/nkl.58cb29q5
title: En-Mig_Collecte données_Eurasien.ne.s_Germaine D

description: Dans le cadre du programme En-Mig, collecte de données personnelles auprès de Geneviève eurasienne d'Indochine venue en France. Elle a été accueillie à l'abbaye de Saint-Rambert en Bugey par la FOEFI (Fédération de l’Œuvre de l’Enfance Française d’Indochine). Un entretien a été réalisé par Yves Denéchère le 5 février 2018.
DOI: 10.7910/dvn/ikrkov
title: Syrian Refugees in Lebanon

description: Using a novel, nationally representative survey of Lebanese citizens aged 50 and older, we test whether personal or vicarious exposure to violence from the Syrian army predicts exclusionary attitudes toward Syrian refugees.
DOI: 10.34847/nkl.a5b6l598
title: En-Mig_Collecte données_Eurasien.ne.s_Binta B

description: Dans le cadre du programme En-Mig, collecte de données personnelles auprès de Binta eurasienne d'Indochine venue en France. Elle a été accueillie à l'abbaye de Saint-Rambert en Bugey par la FOEFI (Fédération de l’Œuvre de l’Enfance Française d’Indochine). Un entretien a été réalisé par Yves Denéchère le 12 juillet 2020.
DOI: 10.15468/dl.saywmt
title: Occurrence Download

description: A dataset containing 5114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-95.38275 -63.13869,-53.40638 -63.13869,-53.40638 -12.20691,-95.38275 -12.20691,-95.38275 -63.13869))",
 "HasGeospatialIssue is false",
 "TaxonKey is Puma concolor"
 ]
}

 The dataset includes 5114 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004129-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/dtkmzk
title: tension-vol-128-lite-2c

description: Lite version of the PFM-Fracture dataset under equibiaxial tension boundary condition with 2 initial cracks and volumetric-deviatoric energy split. This version of dataset is downsampled to 128x128 resolution.
DOI: 10.5281/zenodo.17955092
title: Light Curve Grid for Exploring Physical Relationships of Stripped-Envelope Supernovae

description: Here, we present a grid of simulated stripped envelope supernova light curves. The grid of 1000 light curves are presented in the file yadavalli_zenodo_2025.tar.gz, and the extended grid of 800 light curves are presented in the file yadavalli_zenodo_2025_extended.tar.gz. We also present a simple standalone script that can be used to generate mass and velocity distributions that can then be fed into Sedona. The standalone script is generating_distributions.py, stored inside script.tar.gz.

This data product is associated with the publication at Yadavalli et al 2025: https://ui.adsabs.harvard.edu/abs/2025arXiv250710648K/abstract.

Please direct any questions to karthik.yadavalli@cfa.harvard.edu
DOI: 10.5281/zenodo.17955091
title: Light Curve Grid for Exploring Physical Relationships of Stripped-Envelope Supernovae

description: Here, we present a grid of simulated stripped envelope supernova light curves. The grid of 1000 light curves are presented in the file yadavalli_zenodo_2025.tar.gz, and the extended grid of 800 light curves are presented in the file yadavalli_zenodo_2025_extended.tar.gz. We also present a simple standalone script that can be used to generate mass and velocity distributions that can then be fed into Sedona. The standalone script is generating_distributions.py, stored inside script.tar.gz.

This data product is associated with the publication at Yadavalli et al 2025: https://ui.adsabs.harvard.edu/abs/2025arXiv250710648K/abstract.

Please direct any questions to karthik.yadavalli@cfa.harvard.edu
DOI: 10.15468/dl.j98xt8
title: Occurrence Download

description: A dataset containing 44694 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-75.87948 5.77183,-75.59689 5.77183,-75.59689 5.9964,-75.87948 5.9964,-75.87948 5.77183))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 44694 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004130-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18313892
title: Expanding the targeted protein degradation approach with small molecule chimeras directed to the 26S proteasome

description: Computational raw data of the paper "Expanding the targeted protein degradation approach with small molecule chimeras directed to the 26S proteasome"
DOI: 10.5281/zenodo.18313893
title: Expanding the targeted protein degradation approach with small molecule chimeras directed to the 26S proteasome

description: Computational raw data of the paper "Expanding the targeted protein degradation approach with small molecule chimeras directed to the 26S proteasome"
DOI: 10.5281/zenodo.18745220
title: Usage of Cognitive Learning Strategies: Relations with Perceived Effectiveness, Academic Self-Efficacy and Academic Performance

description: This repository contains the dataset and R script associated with the forthcoming study Usage of Cognitive Learning Strategies: Relations with Perceived Effectiveness, Academic Self-Efficacy and Academic Performance. The study examined the use of twelve cognitive learning strategies among first-year medical students, students’ perceptions of the effectiveness of these strategies for both short- and long-term outcomes, and how strategy use relates to academic self-efficacy and academic performance.



LSQ2This dataset contains questionnaire data on learning strategy usage, perceived effectiveness, and academic self-efficacy, as well as students’ grades.

ScriptR_LearningStrategyUse_Effectiveness_OutcomesThis file contains the complete R script used to analyse the dataset. The script includes explanations of all variables, Dutch-to-English translations, and explanations of acronyms used in the dataset.
DOI: 10.5281/zenodo.18745221
title: Usage of Cognitive Learning Strategies: Relations with Perceived Effectiveness, Academic Self-Efficacy and Academic Performance

description: This repository contains the dataset and R script associated with the forthcoming study Usage of Cognitive Learning Strategies: Relations with Perceived Effectiveness, Academic Self-Efficacy and Academic Performance. The study examined the use of twelve cognitive learning strategies among first-year medical students, students’ perceptions of the effectiveness of these strategies for both short- and long-term outcomes, and how strategy use relates to academic self-efficacy and academic performance.



LSQ2This dataset contains questionnaire data on learning strategy usage, perceived effectiveness, and academic self-efficacy, as well as students’ grades.

ScriptR_LearningStrategyUse_Effectiveness_OutcomesThis file contains the complete R script used to analyse the dataset. The script includes explanations of all variables, Dutch-to-English translations, and explanations of acronyms used in the dataset.
DOI: 10.6084/m9.figshare.31390782
title: LC-MS Data for the <i>Nature Communications</i> publication, "SpiR is a gut microbial enzyme that drives cholesterol conversion"

description: The gut microbiota contributes to cholesterol homeostasis by converting cholesterol into coprostanol, a non-absorbable sterol excreted in the feces. However, the enzymes mediating this process remain poorly defined. Here, we identify <i>spiR</i>, a steroid Δ<sup>5-4</sup> isomerase/3-keto reductase from <i>Eubacterium coprostanoligenes</i> that catalyzes the initial oxidation of cholesterol to cholestenone, a requisite step in coprostanol production. We confirm that SpiR oxidizes both cholesterol and pregnenolone, and stereospecifically reduces 3-keto-steroids to 3β-hydroxylated forms. We show that SpiR preferentially binds to cholesterol over related steroids and functions as an NAD(H)-dependent homodimer. Through phylogenetic analysis, we show that <i>spiR</i> clusters with known Δ<sup>5-4</sup> isomerases and is restricted to an uncultured clade within Acutalibacteraceae, where it frequently co-occurs with species encoding <i>ismA</i>, a gene previously implicated in cholesterol conversion. We analyze a multi-omic dataset from three human cohorts and find that <i>spiR</i> homologs were strongly enriched in individuals<b> </b>exhibiting cholesterol conversion. We also show that <i>spiR</i> homologs have a greater predictive power for cholesterol conversion than <i>ismA</i> homologs, establishing them as superior markers of microbial cholesterol metabolism. Our findings refine the enzymatic model of cholesterol metabolism in the gut and establish <i>spiR</i> as a critical biomarker and mechanistic driver for microbiome-mediated cholesterol reduction.
DOI: 10.6084/m9.figshare.31390782.v1
title: LC-MS Data for the <i>Nature Communications</i> publication, "SpiR is a gut microbial enzyme that drives cholesterol conversion"

description: The gut microbiota contributes to cholesterol homeostasis by converting cholesterol into coprostanol, a non-absorbable sterol excreted in the feces. However, the enzymes mediating this process remain poorly defined. Here, we identify <i>spiR</i>, a steroid Δ<sup>5-4</sup> isomerase/3-keto reductase from <i>Eubacterium coprostanoligenes</i> that catalyzes the initial oxidation of cholesterol to cholestenone, a requisite step in coprostanol production. We confirm that SpiR oxidizes both cholesterol and pregnenolone, and stereospecifically reduces 3-keto-steroids to 3β-hydroxylated forms. We show that SpiR preferentially binds to cholesterol over related steroids and functions as an NAD(H)-dependent homodimer. Through phylogenetic analysis, we show that <i>spiR</i> clusters with known Δ<sup>5-4</sup> isomerases and is restricted to an uncultured clade within Acutalibacteraceae, where it frequently co-occurs with species encoding <i>ismA</i>, a gene previously implicated in cholesterol conversion. We analyze a multi-omic dataset from three human cohorts and find that <i>spiR</i> homologs were strongly enriched in individuals<b> </b>exhibiting cholesterol conversion. We also show that <i>spiR</i> homologs have a greater predictive power for cholesterol conversion than <i>ismA</i> homologs, establishing them as superior markers of microbial cholesterol metabolism. Our findings refine the enzymatic model of cholesterol metabolism in the gut and establish <i>spiR</i> as a critical biomarker and mechanistic driver for microbiome-mediated cholesterol reduction.
DOI: 10.23729/fd-aa198109-6ab6-3db5-a33a-0140b0aa0557
title: Schultze Dykes

description: SSG-'xxx' samples – Aplitic porphyry dykes containing quartz segregations and early, high temperature 'DQ' type quartz veins. The dykes cross-cut the Schultze granite. The samples are from the mapped Schultze granite, Arizona, USA. Sample locations (WGS84): Sample SG-45T: 33.36584022, -110.9826284 Sample SG-0703-20T: 33.3458003, -110.9878635 Preview dataset found at https://doi.org/10.23729/fd-824b9a18-74bc-30e8-86d0-e73f643b4577 . To obtain data, please contact fairdata-pas@gtk.fi.
DOI: 10.5281/zenodo.17585185
title: microRNA Knockout/Over-expression differential expression results in human

description: # Removed mirna_experiment_info.tsv

#TODO: add edgeR version and R
DOI: 10.5281/zenodo.18745741
title: microRNA Knockout/Over-expression differential expression results in human

description: # Removed mirna_experiment_info.tsv

#TODO: add edgeR version and R
DOI: 10.15468/dl.wqhbw5
title: Occurrence Download

description: A dataset containing 50708 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-103.61109 25.4386,-103.61109 25.4386,-103.37108 25.31859,-103.13339 25.53325,-103.3804 25.72234,-103.69031 25.66564,-103.61109 25.4386))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 50708 records from 190 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004108-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15277297
title: Spatial Transcriptomics Datasets

description: Datasets from Visium, Slide-seq, Stereo-seq and STARmap Spatial Transcriptomics Technologies. 

10X Visium: Dorsolateral Prefrontal Cortex (DLPFC, 12 slices), Human Breast Cancer (HBC), Mouse Brain Anterior (MBA), Human Ovarian Cancer (HOC), Human Lymph Node (HLN), and Mouse Kidney (MK).

Note: Data.zip contains only the DLPFC 151673 slice.

STARmap: Mouse Visual Cortex (MVC)

Stereo-seq: Mouse Brain (MB), Axolotl Brain (AB), and nine time-point samples from the Mouse Organogenesis Spatiotemporal Transcriptomic Atlas (MOSTA - E9.5 E1S1, E9.5 E2S1, E10.5 E1S1, E10.5 E2S1, E11.5 E1S1, E12.5 E1S1,E12.5 E2S1, E13.5 E1S1, and E14.5 E1S1)

BaristaSeq: Mouse Primary Cortex (MPC) 

SlideSeq: Mouse Olfactory Bulb (MOB)

 

Xenium: Mouse Partial Coronal

 

Ground-truth annotations are available for DLPFC 12 slices, HBC, MBA, MVC, AB, MOSTA 9 datasets and MPC.
DOI: 10.5281/zenodo.18745782
title: Spatial Transcriptomics Datasets

description: Datasets from Visium, Slide-seq, Stereo-seq and STARmap Spatial Transcriptomics Technologies. 

10X Visium: Dorsolateral Prefrontal Cortex (DLPFC, 12 slices), Human Breast Cancer (HBC), Mouse Brain Anterior (MBA), Human Ovarian Cancer (HOC), Human Lymph Node (HLN), and Mouse Kidney (MK).

Note: Data.zip contains only the DLPFC 151673 slice.

STARmap: Mouse Visual Cortex (MVC)

Stereo-seq: Mouse Brain (MB), Axolotl Brain (AB), and nine time-point samples from the Mouse Organogenesis Spatiotemporal Transcriptomic Atlas (MOSTA - E9.5 E1S1, E9.5 E2S1, E10.5 E1S1, E10.5 E2S1, E11.5 E1S1, E12.5 E1S1,E12.5 E2S1, E13.5 E1S1, and E14.5 E1S1)

BaristaSeq: Mouse Primary Cortex (MPC) 

SlideSeq: Mouse Olfactory Bulb (MOB)

 

Xenium: Mouse Partial Coronal

 

Ground-truth annotations are available for DLPFC 12 slices, HBC, MBA, MVC, AB, MOSTA 9 datasets and MPC.
DOI: 10.17909/mgsc-0985
title: GULP: The Galaxy UV Legacy Program
DOI: 10.5281/zenodo.18745740
title: Stable soap bubble clusters with multiple torus bubbles: getting a bit more exotic

description: The clusters geometries are based on prisms and Archimedean solids.





Surface Evolver configuration files allowing to get stable soap bubble clusters with multiple torus bubbles.

Stable soap bubble clusters from the simulations using the previous configuration files (coarse and fine discretizations).

Multimaterial mesh versions of Surface Evolver dump files: MultiTracker format.

Python script to generate Surface Evolver configuration files.

Python script to view the clusters independently of Surface Evolver. Use of Polyscope.



The compressed tarball README.txz only contains the tex/bib files and figures to generate README.pdf

For geometries based on Platonic solids, see the previous repository Stable soap bubble clusters with multiple torus bubbles.
DOI: 10.5281/zenodo.18442419
title: Stable soap bubble clusters with multiple torus bubbles: getting a bit more exotic

description: The clusters geometries are based on prisms and Archimedean solids.





Surface Evolver configuration files allowing to get stable soap bubble clusters with multiple torus bubbles.

Stable soap bubble clusters from the simulations using the previous configuration files (coarse and fine discretizations).

Multimaterial mesh versions of Surface Evolver dump files: MultiTracker format.

Python script to generate Surface Evolver configuration files.

Python script to view the clusters independently of Surface Evolver. Use of Polyscope.



The compressed tarball README.txz only contains the tex/bib files and figures to generate README.pdf

For geometries based on Platonic solids, see the previous repository Stable soap bubble clusters with multiple torus bubbles.
DOI: 10.15468/dl.umatp4
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "StateProvince is Tamaulipas",
 "TaxonKey is Gleditsia"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004131-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.djgdyw
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "NetworkKey is 99d66b6c-9087-452f-a9d4-f15f2c2d0e7e",
 "TaxonKey is Chordata"
 ]
 },
 {
 "and" : [
 "TaxonKey is one of (Varanus niloticus [GBIF Backbone Taxonomy], Varanus albigularis [GBIF Backbone Taxonomy], Varanus exanthematicus [GBIF Backbone Taxonomy], Varanus griseus [GBIF Backbone Taxonomy], Varanus yemenensis [GBIF Backbone Taxonomy])",
 "InstitutionCode is one of (Royal Ontario Museum: ROM)"
 ]
 }
 ]
}

 The dataset includes 34 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004132-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7q3ak3
title: Occurrence Download

description: A dataset containing 3403810 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is A global database for the distributions of crop wild relatives"
 ]
}

 The dataset includes 3403810 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004125-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pqxz88
title: Occurrence Download

description: A dataset containing 2863 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Geometry POLYGON((-74.92575 5.09527,-74.85434 5.09527,-74.85434 5.20303,-74.92575 5.20303,-74.92575 5.09527))",
 "HasGeospatialIssue is false",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 2863 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004133-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h6k9ub
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "StateProvince is Tamaulipas",
 "TaxonKey is Gliricidia sepium"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004134-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14934320
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.bjk4av
title: Occurrence Download

description: A dataset containing 366 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is Monachus monachus"
 ]
}

 The dataset includes 366 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004135-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.