cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3558705
title: Appendix A. Table comparing hierarchy theory, panarchy theory, scale domains, and power laws.

description: Table comparing hierarchy theory, panarchy theory, scale domains, and power laws.
DOI: 10.6084/m9.figshare.3558702
title: Appendix B. Table describing different methods used to examine the shape of body size distributions.

description: Table describing different methods used to examine the shape of body size distributions.
DOI: 10.6084/m9.figshare.3558702.v1
title: Appendix B. Table describing different methods used to examine the shape of body size distributions.

description: Table describing different methods used to examine the shape of body size distributions.
DOI: 10.6084/m9.figshare.3558699
title: Supplement 1. R script, results, and example data set provided to early-career ecologists for a survey of statistical methods used in a standard analysis.

description: File List acorn_analysis.Rmd (MD5: 8e0fe41f782f827ba9ae1fd0554a492a) pairs-JSG.R (MD5: 6d965dbd767200c3acb5ea113d3768b1) stats_data.csv (MD5: a715516b78895a535385fa3e36d674db) selected_variables.csv (MD5: 05470bba822f24231a2dc3bd473b1ad8) Description This supplement includes an R (R Core Team 2013) markdown script (acorn_analysis.Rmd) and required functions (pairs-JSG.R) that provides an analysis of the example data set provided to survey participants. The data set provided to survey participants (stats_data.csv) is a subset of data file from the paper "Walter D. Koenig and Johannes M. H. Knops. 2013. Large-scale spatial synchrony and cross-synchrony in acorn production by two California oaks. Ecology 94:83–93.http://dx.doi.org/10.1890/12-0940.1" downloaded from Ecological Archives. Seven of the original 13 environmental variables were selected based on a preliminary analysis of the full data set to reduce complexity of model fitting for participants. Columns were renamed for convenience of analysis in R. We in no way intend this as a criticism or an endorsement of the analysis performed by Koenig and Knops. We quite liked their paper, and simply selected this data set as it was freely available from <i>Ecological Archives</i> and fit our requirements of an observational study with a single response and many predictors. The file (selected_variables.csv) is a summary of the results from survey participants, listing each of the variables included in their final models.
DOI: 10.6084/m9.figshare.3558699.v1
title: Supplement 1. R script, results, and example data set provided to early-career ecologists for a survey of statistical methods used in a standard analysis.

description: File List acorn_analysis.Rmd (MD5: 8e0fe41f782f827ba9ae1fd0554a492a) pairs-JSG.R (MD5: 6d965dbd767200c3acb5ea113d3768b1) stats_data.csv (MD5: a715516b78895a535385fa3e36d674db) selected_variables.csv (MD5: 05470bba822f24231a2dc3bd473b1ad8) Description This supplement includes an R (R Core Team 2013) markdown script (acorn_analysis.Rmd) and required functions (pairs-JSG.R) that provides an analysis of the example data set provided to survey participants. The data set provided to survey participants (stats_data.csv) is a subset of data file from the paper "Walter D. Koenig and Johannes M. H. Knops. 2013. Large-scale spatial synchrony and cross-synchrony in acorn production by two California oaks. Ecology 94:83–93.http://dx.doi.org/10.1890/12-0940.1" downloaded from Ecological Archives. Seven of the original 13 environmental variables were selected based on a preliminary analysis of the full data set to reduce complexity of model fitting for participants. Columns were renamed for convenience of analysis in R. We in no way intend this as a criticism or an endorsement of the analysis performed by Koenig and Knops. We quite liked their paper, and simply selected this data set as it was freely available from <i>Ecological Archives</i> and fit our requirements of an observational study with a single response and many predictors. The file (selected_variables.csv) is a summary of the results from survey participants, listing each of the variables included in their final models.
DOI: 10.6084/m9.figshare.3558696
title: Appendix A. Annual and growing-season weather data and expanded description of methods for flux measurements, chamber volume estimation, and CO2-balance calculations. The appendix also contains nine supplementary figures (pictures and a map of the field site, soil temperature, thaw depth, monthly fluxes, ANPP, NDVI, water table depth) and five tables (statistical results and summaries of warming effects on environmental variables, monthly fluxes, biomass/ANPP/canopy N, and model parameters).

description: Annual and growing-season weather data and expanded description of methods for flux measurements, chamber volume estimation, and CO2-balance calculations. The appendix also contains nine supplementary figures (pictures and a map of the field site, soil temperature, thaw depth, monthly fluxes, ANPP, NDVI, water table depth) and five tables (statistical results and summaries of warming effects on environmental variables, monthly fluxes, biomass/ANPP/canopy N, and model parameters).
DOI: 10.6084/m9.figshare.3558696.v1
title: Appendix A. Annual and growing-season weather data and expanded description of methods for flux measurements, chamber volume estimation, and CO2-balance calculations. The appendix also contains nine supplementary figures (pictures and a map of the field site, soil temperature, thaw depth, monthly fluxes, ANPP, NDVI, water table depth) and five tables (statistical results and summaries of warming effects on environmental variables, monthly fluxes, biomass/ANPP/canopy N, and model parameters).

description: Annual and growing-season weather data and expanded description of methods for flux measurements, chamber volume estimation, and CO2-balance calculations. The appendix also contains nine supplementary figures (pictures and a map of the field site, soil temperature, thaw depth, monthly fluxes, ANPP, NDVI, water table depth) and five tables (statistical results and summaries of warming effects on environmental variables, monthly fluxes, biomass/ANPP/canopy N, and model parameters).
DOI: 10.6084/m9.figshare.3558693
title: Appendix A. Detailed description of inspection methods, recording of interceptions, and sources of information on interceptions.

description: Detailed description of inspection methods, recording of interceptions, and sources of information on interceptions.
DOI: 10.6084/m9.figshare.3558693.v1
title: Appendix A. Detailed description of inspection methods, recording of interceptions, and sources of information on interceptions.

description: Detailed description of inspection methods, recording of interceptions, and sources of information on interceptions.
DOI: 10.6084/m9.figshare.3558690
title: Appendix B. Interception frequency and establishments of longhorned beetles and true bark beetles.

description: Interception frequency and establishments of longhorned beetles and true bark beetles.
DOI: 10.6084/m9.figshare.3558690.v1
title: Appendix B. Interception frequency and establishments of longhorned beetles and true bark beetles.

description: Interception frequency and establishments of longhorned beetles and true bark beetles.
DOI: 10.6084/m9.figshare.3558687
title: Appendix C. Detailed description of the SIMEX method used to improve estimation of the Weibull c parameter, and estimation of effects of rare species.

description: Detailed description of the SIMEX method used to improve estimation of the Weibull c parameter, and estimation of effects of rare species.
DOI: 10.6084/m9.figshare.3558687.v1
title: Appendix C. Detailed description of the SIMEX method used to improve estimation of the Weibull c parameter, and estimation of effects of rare species.

description: Detailed description of the SIMEX method used to improve estimation of the Weibull c parameter, and estimation of effects of rare species.
DOI: 10.6084/m9.figshare.3558684
title: Appendix D. Summary table of the number and percentage of established beetle species by interception frequency.

description: Summary table of the number and percentage of established beetle species by interception frequency.
DOI: 10.6084/m9.figshare.3558684.v1
title: Appendix D. Summary table of the number and percentage of established beetle species by interception frequency.

description: Summary table of the number and percentage of established beetle species by interception frequency.
DOI: 10.6084/m9.figshare.3558681
title: Appendix E. Effects of changes in arrival rate on predicted establishments.

description: Effects of changes in arrival rate on predicted establishments.
DOI: 10.6084/m9.figshare.3558681.v1
title: Appendix E. Effects of changes in arrival rate on predicted establishments.

description: Effects of changes in arrival rate on predicted establishments.
DOI: 10.5281/zenodo.3996588
title: Data from: Goal-directed and stimulus-driven selection of internal representations

description: Raw behavioral and eye-tracking datasets of experiments 1 and 2 reported in the manuscript "Goal-directed and stimulus-driven selection of internal representations", by Freek van Ede, Alexander G. Board, Anna C. Nobre<br>
DOI: 10.6084/m9.figshare.3558678
title: Data Paper. Data Paper

description: File List 135Zoocoenoses.txt (MD5: b11669ace2cc4aa58cb018abe5781ba9) 135FoodWebs.txt (MD5: 75e2137a9c8258313cc1accf68cabe23) SIZEWEB Box 1.pdf (MD5: 6bdda45aaba5579a4c0121e22553f83b) SIZEWEB Box 2.pdf (MD5: da9b26b141f459393a367cf59a9e73ce) Description This paper provides data on the taxonomy, abundance, body size, and general feeding habits of soil invertebrates at 135 sites in the Netherlands, along with the edaphic chemical characteristics, air temperature, precipitation, atmospheric deposition, and human management practices of those sites. Sampling, monitoring, and modeling activities were performed in the framework of the Dutch Soil Quality Network. A total of 258 genera, families, and morpha of free-living soil nematodes, mites, insects, myriapods, enchytraeids, and earthworms, ranging in dry body mass &gt;7 orders of magnitude, were identified, counted, and measured for biomass estimates. Trophic links reflecting life history were estimated from existing literature and, when possible, compared with microarthropods’ carbohydrase activity. Environmental variables were collected at each site, including soil chemistry (pH, carbon, nitrogen, phosphate, cadmium, chrome, copper, lead, mercury, nickel, and zinc), atmospheric nitrogen deposition, inputs of nitrogen and phosphorus from manure, rainfall, and temperature. Prior analyses of these data are cited, and the data are released here for the first time. These data describe how strongly different types of human-induced disturbance influence the abundance–mass allometric relationships in soil biota. <i>Key words: Acarina; agroecosystem; allometric scaling; Annelida; atmospheric N deposition; cattle pressure; Collembola; land use; N eutrophication; Nematoda; soil nutrients; The Netherlands.</i>
DOI: 10.5281/zenodo.3996587
title: Data from: Goal-directed and stimulus-driven selection of internal representations

description: Raw behavioral and eye-tracking datasets of experiments 1 and 2 reported in the manuscript "Goal-directed and stimulus-driven selection of internal representations", by Freek van Ede, Alexander G. Board, Anna C. Nobre<br>
DOI: 10.15468/dl.3h9p8q
title: Occurrence Download

description: A dataset containing 74 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monsonia grandifolia R.Knuth"
 ]
}

 The dataset includes 74 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053735-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j72tjt
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Micrargeriella aphylla R.E.Fr."
 ]
}

 The dataset includes 24 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053737-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kt43wg
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Manulea schaeferi Pilg."
 ]
}

 The dataset includes 50 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053739-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xejuyd
title: Occurrence Download

description: A dataset containing 1639 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Antrostomus noctitherus (Wetmore, 1919)"
 ]
}

 The dataset includes 1639 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053738-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2umcyj
title: Occurrence Download

description: A dataset containing 22140 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Medicago orbicularis (L.) Bartal."
 ]
}

 The dataset includes 22140 records from 593 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053736-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9whwhz
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microtropis ovata Merr. & F.L.Freeman"
 ]
}

 The dataset includes 6 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053740-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jqc57q
title: Occurrence Download

description: A dataset containing 5587 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Antrostomus ridgwayi Nelson, 1897"
 ]
}

 The dataset includes 5587 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053741-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j7y6t6
title: Occurrence Download

description: A dataset containing 104 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monsonia heliotropioides (Cav.) Boiss."
 ]
}

 The dataset includes 104 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053742-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c92d7z
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Micrechites grandiflorus (D.J.Middleton) D.J.Middleton"
 ]
}

 The dataset includes 6 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053743-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pcf7je
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Microtropis pallens Pierre"
 ]
}

 The dataset includes 30 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053745-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mqjakt
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Manulea silenoides E.Mey. ex Benth."
 ]
}

 The dataset includes 90 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053744-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mpucrq
title: Occurrence Download

description: A dataset containing 338 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Medicago orthoceras (Kar. & Kir.) Trautv."
 ]
}

 The dataset includes 338 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053746-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yvrd3b
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monsonia ignea Schinz"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053747-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fgbkwu
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Micrechites jacquetii Pierre"
 ]
}

 The dataset includes 34 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053748-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gyvccd
title: Occurrence Download

description: A dataset containing 117562 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melilotus officinalis (L.) Lam."
 ]
}

 The dataset includes 117562 records from 1214 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053702-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/v7fuae
title: Biological Diversity, Ecological Health and Condition of Aquatic Assemblages at National Wildlife Refuges in Southern Indiana, USA

description: The National Wildlife Refuge system is a vital resource for the protection and conservation of biodiversity and biological integrity in the United States. Surveys were conducted to determine the spatial and temporal patterns of fish, macroinvertebrate, and crayfish populations in two watersheds that encompass three refuges in southern Indiana. The Patoka River National Wildlife Refuge had the highest number of aquatic species with 355 macroinvertebrate taxa, six crayfish species, and 82 fish species, while the Big Oaks National Wildlife Refuge had 163 macroinvertebrate taxa, seven crayfish species, and 37 fish species. The Muscatatuck National Wildlife Refuge had the lowest diversity of macroinvertebrates with 96 taxa and six crayfish species, while possessing the second highest fish species richness with 51 species. Habitat quality was highest in the Muscatatuck River drainage with increased amounts of forested habitats compared to the Patoka River drainage. Biological integrity of the three refuges ranked the Patoka NWR as the lowest biological integrity (mean IBI reach scores = 35 IBI points), while Big Oaks had the highest biological integrity (mean IBI reach score = 41 IBI points). The Muscatatuck NWR had a mean IBI reach score of 31 during June, which seasonally increased to a mean of 40 IBI points during summer. Watershed IBI scores and habitat condition were highest in the Big Oaks NWR.
DOI: 10.15468/g7pvgv
title: A new type of ant-decapitation in the Phoridae (Insecta: Diptera)

description: The genus Dohrniphora is a hyperdiverse group of phorid flies, a family whose species are commonly characterized as generalized scavengers. The lifestyle of most species of Dohrniphora is unknown, although one cosmopolitan, synanthropic species, D. cornuta (Bigot) fits the general scavenger mold. Here we show that flies of the D. longirostrata species group exhibit highly specific “headhunting” behavior in which injured Odontomachus ants are decapitated, the heads dragged away, and females either feed on their contents or lay an egg nearby. Since most females studied lacked eggs in their ovaries, we conclude that this bizarrely specialized feeding is necessary to provide nutrients for reproduction in these flies. Our study provides further evidence that injured ants are a common, stable resource in tropical ecosystems that support a wide array of phorid flies. Such narrowly constrained lifestyles, as exemplified by exclusively feeding on and breeding in the head contents of certain ponerine worker ants, could allow the co-existence of a huge community of saprophagous flies.
DOI: 10.15468/q5ycss
title: New synonym of Tipula (Vestiplex) wahlgrenana Alexander, 1968 (Diptera: Tipulidae)

description: Based on examination of type specimens a crane fly species Tipula (Vestiplex) hugueniniana Alexander, 1971 is proposed as junior synonym of Tipula (V.) wahlgrenana Alexander, 1968. The new synonymy is based on similarity of male genitalia.
DOI: 10.15468/yudtkw
title: On the morphology, biometry and biogeography of Lamtopyxis callistoma (Amoebozoa: Arcellinida)

description: The ultra-structure of the shell and the morphometric variability of soil inhabiting testate amoeba Lamtopyxis callistoma from Madagascar were studied by using light- and scanning electron microscopy. The biometrical characteristic of the species was made on the basis of 75 specimens measured. In addition to the diameter of the shell, six other shell characters were described biometrically for the first time. The analysis of the variation coefficients shows that the studied population of L. callistoma is comparatively homogeneous and almost all measured characters are weakly to moderate variable (CV less than 10%). Scanning electron microscopy (SEM) studies on the shell ultra-morphology show that it has a smooth apertural surface with a thick layer of porous and fibrous organic cement and a rough dorsal surface composed of bigger and angular pieces of quartz. The shell wall has a thickness of about 5-6 µm and is composed of three layers. Unlike the previously accepted opinion that species is characterized by the presence of four teeth, this study shows that population of L. callistoma from Madagascar is comprised of both, specimens with four teeth and specimens with three teeth, in ratio of about 60% to 40%. Taking into account the restricted geographical distribution, large sizes and characteristic apertural morphology of L. callistoma it is assumed that this species, like some bryophilic ‘Nebelas’ with circumaustral distribution (e.g. Apodera vas, Alocodera cockayni, Certesella certesi, Certesella martiali, etc.), can be used as an example that in free-living microbial eukaryotes ‘not everything is everywhere’.