cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23820945.v4
title: The Combined Effect of the Cohesion and the Finite-size on the Collapse of Wet Granular Columns

description: The collapse of a finite-size wet granular column is systematically studied and the determinants affecting its dynamics are analyzed based on the established discrete element model and corresponding small-scale experiments. With the aid of parametric analysis, the dimensionless cohesion parameter containing system size and grain-scale Bond number is proposed, and its relevance in characterizing column stability and collapse dynamics is further confirmed. For the collapse of wet granular columns with a fixed aspect ratio, the initial height contained in the cohesion parameter is verified to be a manifestation of finite-size effect, which is present in a wet granular system and coupled with the cohesive effect. Such coupling effect is taken into account in our proposed universal scaling laws that can be applied to uniformly describe the deposit morphology of wet granular columns after collapse.
DOI: 10.6084/m9.figshare.7856660.v1
title: Analysis scripts and supplementary files: Incidence of symptomatic and asymptomatic HIV-associated sensory neuropathy in tenofovir-exposed individuals

description: <b>Bibliometric information</b>Pillay P, Wadley AL, Cherry CL, Karstaedt AS, Kamerman PR. HIV-associated sensory neuropathy continues to be a problem in South Africans starting tenofovir-based antiretroviral treatment.<br><b>Abstract</b><i>Objectives:</i> HIV-associated sensory neuropathy (HIV-SN) is a common and often painful neurological condition associated with HIV-infection and its treatment. However, data on the incidence of HIV-SN in neuropathy-free individuals initiating combination antiretroviral therapies (cART) that do not contain the neurotoxic agent stavudine are lacking.<br><i>Design: </i>We investigated the six-month incidence of HIV-SN in ART naïve individuals initiating tenofovir (TDF)-based cART, and the clinical factors associated with the development of HIV-SN.<br><i>Methods:</i> 120 neuropathy-free and ART naïve individuals initiating cART at a single centre in Johannesburg, South Africa were enrolled. Participants were screened for HIV-SN at study enrolment and then approximately every two-months for a period of approximately six-months. Symptomatic HIV-SN was defined by the presence of at least one symptom (pain/burning, numbness, paraesthesias) and at least two clinical signs (reduced vibration sense, absent ankle reflexes or pin-prick hypoaesthesia). Asymptomatic HIV-SN required at least two clinical signs only.<br><i>Results: </i>Approximately 80% of the cohort completed three or more visits with the six-mopnth period. Eleven individuals developed asymptomatic HIV-SN and nine developed symptomatic HIV-SN, giving a six-month cumulative incidence of neuropathy of 140 cases per 1000 patients (95% CI: 80 - 210) at an incidence rate of 0.37 (95% CI: 0.2 - 0.5) per person year. Increasing height and a current tuberculosis (TB) infection were independently associated with the risk of developing HIV-SN (p &lt; 0.05).<br><i>Conclusions: </i>We found that within the first six months of starting cART, incident SN persists in the post-stavudine era, but tends to be asymptomatic.<b><br></b><b>Analysis outputs</b>The data required to run the scripts have not been included in the repo because study participants did not consent to public release of their data. However, the data are available on request from Peter Kamerman (peter.kamerman@gmail.com), or by submitting an issue at: https://github.com/kamermanpr/hivsn-incidence/issues.<br>The outputs from all analysis scripts are located in the /outputs directory. The outputs are formatted as markdown and html. The markdown documents are intermediate outputs generated during the production of the html documents, and while they allow quick browsing of the analysis outputs on GitHub, MathJax formulae and tables are not formatted. <br>
DOI: 10.17632/57hgyksgvt
title: Supplemental Figures for Article: ''An artistic exploration of pigment patterns: from dermatoscope to wearable art''

description: Figure A. “Schematic drawing of the ‘Peas-in-a-Pod’ pattern. Author’s own creation by digital drawing, used to create the photopolymer stamp as described in Fi.g.1 legend in the main article’’ 

Figure B. “Schematic design of the central globular peripheral reticular pattern, adapted from Dermoscopedia, used to create the stamp for the second piece in Fig. 2’’
DOI: 10.17632/7nn6h86snn
title: MapIntel Case Study Dataset

description: Daily news articles from multiple international sources collected using NewsAPI (https://newsapi.org/) during the period between October 2020 and June 2021.
The total number of records is 334,925 documents. The format of the dataset is in JSON.

Cleaning is applied to the direct results from the API. We ensure that each document is unique, is written in English, and doesn’t have any HTML tags or any strange pattern.
Each record is a dictionary with the following keys and their descriptions:
- "text": Cleaned content of the news article (concatenation of "title", "description", and "content" received from the API request. "content" is truncated to 200 characters).
- "title": The headline or title of the article.
- "url": The direct URL to the article.
- "timestamp": The date and time that the article was published, in UTC (+000). Formatted as "%Y-%m-%dT%H:%M:%SZ".
- "snippet": Excerpt of the document displayed in the user interface of MapIntel.
- "image_url": The URL to a relevant image for the article.
DOI: 10.17632/tg3z7xxkdb
title: vegetable disease

description: vegetable disease
DOI: 10.6084/m9.figshare.29105027.v1
title: [<sup>68</sup>Ga]DOTA-pentixafor, on-cassette

description: Time List and Cassette Layout for the synthesis of Gallium-68 pentixafor using an on-cassette protocol with cyclotron produced [<sup>68</sup>Ga]GaCl<sub>3</sub>This labeling method, uses a preformulated reactor and does not require solid phase extraction (SPE) purification after labeling.Reference: Wang IE, Cheng K, Brooks AF, Scott PJH, Viglianti BL. Towards a General Method for Using Cyclotron-Produced Ga68 to Manufacture Clinical and Research Ga68 Tracers. Molecules. 2024; 29(22):5457. https://doi.org/10.3390/molecules29225457
DOI: 10.1184/r1/14226830.v1
title: eVTOL Battery Dataset

description: A dataset of lithium ion battery discharge data including voltage, temperature, and current from eVTOL duty cycles. <br><br>The baseline profile is:- High power discharge (takeoff)- Low power discharge (cruise)- High power discharge (landing)- Rest to allow temperature to moderate- Constant current charge- Constant voltage charge- Rest<br>This dataset varies parameters such as ambient temperature, cruise length, aircraft power, charge current, and others which eVTOLs may regularly encounter during flight. It is intended to assist with the development of algorithms to manage electric aircraft batteries, including state of charge and state of health estimation, lifetime prediction, and others.
DOI: 10.6084/m9.figshare.24961875.v1
title: Data from: Diet evolution and body temperature in tetrapods: cool old carnivores and hot young herbivores

description: Diet is a key aspect of life in animals. There have been numerous origins of herbivory across animals, but the factors that explain these origins remain poorly understood. One potentially crucial factor is body temperature (T<sub>b</sub>), since the gut-dwelling bacteria that help digest cellulose in many herbivores are thought to require high temperatures. However, analyses in birds, lizards, and mammals found only limited evidence for higher T<sub>b</sub> in herbivores than carnivores. Those previous analyses tested whether diet explains T<sub>b</sub> evolution, and not whether T<sub>b</sub> explains diet evolution. Here, we used phylogenetic methods to test whether T<sub>b</sub> helps explain diet evolution across tetrapods. We analyzed 1712 species with matched data on diet, T<sub>b</sub>, and phylogeny. We also include body size and diel activity. Ancestral reconstructions indicated that tetrapods likely had a carnivorous ancestor, followed by repeated transitions to omnivory and herbivory, especially in the last 110 million years (i.e. when angiosperms came to dominate plant communities). Thus, extant herbivorous lineages in tetrapods are relatively young, in contrast to many older carnivorous lineages. They are also relatively unstable, since reversals from herbivory to omnivory and from omnivory to carnivory were as frequent as gains of herbivory and omnivory. Using phylogenetic logistic regression (and other methods), we generally support the hypothesis that higher T<sub>b</sub> helps explain the evolution of herbivory across tetrapods and within birds, mammals, lepidosaurs, and turtles. Phylogenetic path analyses suggest that T<sub>b </sub>generally drives the evolution of herbivory, and not vice versa. Our analyses also suggest that T<sub>b</sub> may be more important for the evolution of herbivory than large body size or diurnal diel activity, both of which are significant predictors of herbivory in some cases.
DOI: 10.6084/m9.figshare.27902325.v1
title: Source Data for 'Metal-oxide phase transition of platinum nanocatalyst below fuel cell open-circuit voltage'

description: Source Data for the paper: 'Metal-oxide phase transition of platinum nanocatalyst below fuel cell open-circuit voltage'
DOI: 10.6084/m9.figshare.28408457.v1
title: Clustering Ensemble Algorithm Based on Weighted Random Walk Co-association Matrix

description: weighted clustering and random walk
DOI: 10.17632/5xjycdry3v
title: Quantitative morphometry of the lungs using the QuPath software.

description: The project was created to automate and improve the quality of quantitative morphometry of histological images of the lungs.
To work, the QuPath software version 0.2.3 and higher is used. First of all, the project is aimed at working with the whole slide image (wsi).

Version 1 features:
- calculation of the total ROI area
- percentage ratio of stroma, vessels and alveoli
- radial alveolate count (RAC)
DOI: 10.6084/m9.figshare.24309490.v1
title: Early Islamic Qibla Database 2023

description: This is an Excel spreadsheet with over 280 mosques and places of prayer. The mosques are listed in chronological order along with GPS coordinates and links to further information. These places date from the very first mosques built in Medina onwards. I have tried to produce an exhaustive list for the first three centuries of Islam, then followed by a few important later mosques.I published the first edition of this list in January 2021. This is the third edition. (October 2023) There is an active up-to-date list that is published on my website: https://nabataea.net/ Follow the menu Founding of Islam /Qibla Tool. This tool provides a graphical overview of the data and is useful for analysis.Dan Gibson, January 2023<br>Book: Gibson, Dan, Let The Stones Speak, 2023, Independent Scholars Press
DOI: 10.6084/m9.figshare.25122034.v1
title: Exploring Heterogeneous Effects of Victimization on Changes in Fear of Crime: The Moderating Role of Neighborhood Conditions

description: A growing research body shows that victimization increases victims’ fear of crime. Typically, this research estimates average effects, which may conceal that people respond differently to victimization or that ecological contexts shape the experience of crime. The current study is among the few that attempt to uncover potential heterogeneities in victimization effects by ecological contexts. It explores whether the victims’ neighborhood conditions (levels of crime, disorder, and concentrated disadvantage) moderate the impact of violent victimization close to home on fear of crime. For this purpose, longitudinal multilevel models were estimated using data from a two-wave panel survey of about 3300 adult respondents nested in 140 neighborhoods in two large German cities. The results suggest that individuals from more disadvantaged neighborhoods tend to increase their fear of crime more strongly after victimization than those from more advantaged areas. For the other neighborhood conditions, victimization effects were estimated to be more homogenous.
DOI: 10.6084/m9.figshare.28430936.v2
title: CARTNAT SPATIAL DATA ARCHIVE

description: CARTNAT spatial data layers
DOI: 10.17632/xxdybwhjgj
title: DATA-DRIVEN ANALYSIS OF DYNAMIC CHARACTERISTICS IN A FORMULA SAE RACE CAR

description: Trabalho apresentado ao III Simpósio Gaúcho de Engenharia Aeroespacial e Mecânica, Santa Maria, RS, Brasil.
DOI: 10.6084/m9.figshare.14900181.v1
title: Temperature data of Sebangau Tropical Peatland, Kalimantan, Indonesia

description: The temperature data were collected from a Forested and a Drained area in Sebangau Tropical Peatland, Kalimantan, Indonesia. The detail description can be read from the related paper:<br>Putra, S. S., Holden, J., & Baird, A. J. (2021). The effects of ditch dams on water‐level dynamics in tropical peatlands. Hydrological Processes, 35(5), e14174.<br><br>
DOI: 10.6084/m9.figshare.22045085.v1
title: Chromosomal-Level Genome Assembly of Papilio elwesi Leech, 1889 (Lepidoptera: Papilionidae)

description: The genome annotation files of Papilio elwesi, including repeat-masked genome assembly (genome.fa.masked.gz), repeat annotation (repeats.gff.gz), non-coding RNA annotations (ncRNAs.gff3.gz), InterProscan annotations (iprscan.tsv.gz), EggNOG annotations (eggnog.emapper.annotations.gz), annotations of MAKER-annotated protein-coding genes (gene.maker.gff.gz), coding sequences of MAKER-annotated protein-coding genes (cds.maker.fasta.gz), amino-acid sequences of MAKER-annotated protein-coding genes (proteins.maker.fasta.gz), transcripts of MAKER-annotated protein-coding genes (transcripts.maker.fasta.gz). <br>
DOI: 10.6084/m9.figshare.25886331.v1
title: Explanation of the data from Coupling tensile test with LC-OCT and Ultrasound imaging : Investigation of the skin sublayers mechanical behavior

description: Explanation of the data.
DOI: 10.6084/m9.figshare.25952083.v1
title: Data-the Energy Level of Regional Digital Innovation Ecosystems

description: This study introduces the concept of "energy level" into the analysis of innovation ecosystems. Drawing on the theory of "architects", we have identified the key architects of regional digital innovation ecosystems. By integrating Necessary Condition Analysis (NCA) and Fuzzy-set Qualitative Comparative Analysis (fsQCA), we examined the configuration effects of internal architects, external architects, and digital innovation habitats on the energy level of these ecosystems, utilizing data from 30 provinces in China as case studies. The results indicate that the contribution of a single architect to achieving a high energy level in a regional digital innovation ecosystem is limited and cannot be regarded as a necessary condition for driving a high energy level. However, core innovation actors and digital infrastructures emerge as more significant core conditions. The architects of regional digital innovation ecosystems exhibit multiple concurrent causal relationships. The configuration paths of high and non-high energy levels of ecosystems display a causally asymmetric “multiple paths to the same outcome” relationship. The three identified paths for driving high energy levels are categorized as "core actor-infrastructure"-driven paths. The findings of this paper hold substantial theoretical and practical significance for fostering the healthy development of regional digital innovation ecosystems.
DOI: 10.6084/m9.figshare.7391240.v2
title: Output: Meta-regression Negative trend of age

description: Output: Meta-regression Negative trend of age
DOI: 10.6084/m9.figshare.11955498.v4
title: Dataset and code for paper "Spatiotemporal distribution of child trafficking in China and predicting the locations of missing people"

description: The file (baby_find_home_data.txt) is data obtained from a Chinese public welfare website (https://baobeihuijia.com/) looking for missing children.<br>The file (code_v2.zip) is a code file implemented by an under review paper ("Spatiotemporal distribution of child trafficking in China and predicting the locations of missing people").<br>This project uses two C ++ open source libraries (Alglib and CJsonObject). This project complies with the GPL license.<br>Alglib (https://www.alglib.net/) is an open source numerical analysis and data processing library for personal and academic use, developed for the ALGLIB Project Company. Detailed implementation of random forest algorithm used in this project. This library complies with the GPL license.<br>CJsonObject (https://github.com/Bwar/CJsonObject) is a C ++ version of the JSON open source library developed by Bwar based on CJSON. Used in this project for data reading and formatting output. This library complies with the MIT license.
DOI: 10.6084/m9.figshare.24418966.v1
title: ReDeeM_raw_mutation_calling

description: The output folders from redeemV (https://github.com/chenweng1991/redeemV), 13 tar.gz files in totalThese results(after decompress) can be read in following redeemR by assigning the path of the folder to <i>Dir</i>. https://github.com/chenweng1991/redeemR/blob/master/Get_Started.ipynb<br>Old1.BMMC.Consensus.final.tar.gzOld1.HSPC.Consensus.final.tar.gzOld2.BMMC.Consensus.final.tar.gzOld2.HSPC.Consensus.final.tar.gzYoun2.BMMC.Consensus.final.tar.gzYoun2.HPC.Consensus.final.tar.gzYoun2.HSC.Consensus.final.tar.gzYoung1.T1.BMMC.Consensus.final.tar.gzYoung1.T1.HPC.Consensus.final.tar.gzYoung1.T1.HSC.Consensus.final.tar.gzYoung1.T2.BMMC.Consensus.final.tar.gzYoung1.T2.HPC.Consensus.final.tar.gzYoung1.T2.HSC.Consensus.final.tar.gz<br>
DOI: 10.6084/m9.figshare.26411257.v1
title: Regression analysis variable data 2008-2021.xlsx

description: This study incorporates variables such as global value chain participation rates obtained from the Asian Development Bank (ADB) input-output tables and U.S. FDI inflows obtained from Statista. Other economic indicators include China's GDP growth rate, population growth rate, economic openness, and technological readiness
DOI: 10.25909/6311e7a0dcb3f
title: Public holidays in Australian capital cities from 2004 to 2023

description: A dataset indicating which days from 2004 to 2022 are public holidays in the eight Australian capital cities (Adelaide, Brisbane, Canberra, Darwin, Hobart, Melbourne, Perth and Sydney). The dataset is attached in both .xlsx format and .rda format. <br> Each observation represent a date. Variables are included for the date, year, month, day, day of the week, name of the public holiday(s), binary markers for whether a public holiday occurs in the relevant city (1 if it does, missing otherwise), the number of capital cities where a public holiday occurs for a given day, and a binary TRUE/FALSE marker indicating if all cities have a public holiday. <br> Part-time holidays that only occur after 5pm, in particular New Year's Eve in some cities, are excluded. No public holidays are listed as occuring on a Sunday in Adelaide. Under the Holidays Act 1910, all Sundays are nominally public holidays in South Australia. In Hobart, public holidays were included for the Royal Hobart Regatta and Royal Hobart Show but not for Easter Tuesday; Easter Tuesday is only observed by the state public sector. <br> The data for each city was manually collected and combined from the state and territory government webpages included in the references. For any queries regarding this dataset, please do not hesitate to contact the author: matthew.borg@adelaide.edu.au. <br>
DOI: 10.17632/9zk946krfg
title: udkm1Dsim—A simulation toolkit for 1D ultrafast dynamics in condensed matter

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract The udkm1Dsim toolbox is a collection of matlab (MathWorks Inc.) classes and routines to simulate the structural dynamics and the according X-ray diffraction response in one-dimensional crystalline sample structures upon an arbitrary time-dependent external stimulus, e.g. an ultrashort laser pulse. The toolbox provides the capabilities to define arbitrary layered structures on the atomic level including a rich database of corresponding element-specific physical properties. The excitation of ultrafast dynamics is represented by an -temperature model which is commonly applied for ultrafast optical excitations. Structural dynamics due to thermal stress are calculated by a linear-chain model of masses and springs. The resulting X-ray diffraction response is computed by dynamical X-ray theory. The udkm1Dsim toolbox is highly modular and allows for introducing user-defined results at any step in the simulation procedure. Title of program: dkm1Dsim Catalogue Id: AERH_v1_0 Nature of problem Simulate the lattice dynamics of 1D crystalline sample structures due to an ultrafast excitation including thermal transport and compute the corresponding transient X-ray diffraction pattern. Versions of this program held in the CPC repository in Mendeley Data AERH_v1_0; dkm1Dsim; 10.1016/j.cpc.2013.10.009
DOI: 10.4121/17817476.v1
title: Supplementary data for the publication: Experimental Aeroelastic Characterization of a Very Flexible Wing in Steady and Unsteady Inflow

description: This data set contains experimentally determined aerodynamic loads and structural deflection measurements of the wind tunnel tests of the Delft-Pazy wing conducted in November 2020. The data is intended to be used for validating numerical aeroelastic models. An example FEM model is provided. More information can be found in the linked publication: Experimental Aeroelastic Characterization of a Very Flexible Wing in Steady and Unsteady Inflow (SciTech 2022 conference)<br>
DOI: 10.6084/m9.figshare.23935611.v1
title: ChillsDB 2.0: Individual Differences in Aesthetic Chills Among 2,900+ Participants in Southern California

description: ChillsDB 2 is an extension of prior research developing a validated database of audiovisual aesthetic chills stimuli. The original ChillsDB study pioneered an ecologically-valid approach to identify chills-eliciting videos using social media mining. 204 candidate stimuli were tested on 600+ participants to validate a highly reliable subset for chills induction.The present dataset provides additional data on individual differences in chills responses from a sample of 2,937 participants residing in Southern California. Leveraging the validated ChillsDB stimuli, the current study exposed participants to randomized content and gathered questionnaires on personality traits, absorption tendencies, positive emotions, and demographics alongside detailed chills response data. State affect ratings and political orientation variables were also captured.This geographically focused dataset enables investigating how psychological, social, and biological factors relate to variability in aesthetic chills phenomena across a large and diverse sample from this specific region. The inclusion of validated stimuli from the original ChillsDB allows for controlled elicitation of chills experiences. The additional individual difference measures facilitate novel examinations into the predictors and correlates of chills responses.