cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive117338.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117338.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0109235.10fu
title: SH0109235.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0109236.10fu
title: SH0109236.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive117339.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117339.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15468/dl.mymgsp
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((88.799379 24.239544, 88.722369 24.233967, 88.64727499999999 24.217375, 88.575964 24.19018, 88.510205 24.153059, 88.451626 24.106933, 88.401673 24.052947, 88.361571 23.992439, 88.332301 23.926907, 88.314567 23.857971, 88.308789 23.787331, 88.31509 23.71673, 88.333296 23.647902, 88.362942 23.58254, 88.403284 23.522246, 88.45332000000001 23.468497, 88.511816 23.422607, 88.57733500000001 23.3857, 88.64827099999999 23.358674, 88.722893 23.342191, 88.799379 23.336652, 88.875865 23.342191, 88.950487 23.358674, 89.021423 23.3857, 89.08694199999999 23.422607, 89.145438 23.468497, 89.195474 23.522246, 89.235816 23.58254, 89.265462 23.647902, 89.28366800000001 23.71673, 89.289969 23.787331, 89.28419100000001 23.857971, 89.266457 23.926907, 89.23718700000001 23.992439, 89.197085 24.052947, 89.147132 24.106933, 89.088553 24.153059, 89.022794 24.19018, 88.951483 24.217375, 88.876389 24.233967, 88.799379 24.239544))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077858-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive117340.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0109237.10fu
title: SH0109237.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive117340.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive117341.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0109238.10fu
title: SH0109238.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0109239.10fu
title: SH0109239.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.1594/pangaea.971586
title: T-MOSAiC 2022 myThaw data set

description: The Terrestrial Multidisciplinary distributed Observatories for the Study of the Arctic Connections (T-MOSAiC) 2022 myThaw data set provides standardized measurements for permafrost thaw and the linked parameters snow depth, vegetation height, water level, soil texture and tree height as suggested by Boike et al. (2021). It contains measurements from 12 circumpolar permafrost sites where data was obtained using the myThaw app which is based on the user-friendly, multiparameter protocol for standardized monitoring of permafrost thaw from 2021. The data set contains detailed metadata for each site including data on the timing of data collection, geographical coordinates and land surface characteristics (vegetation, ground surface and water features).
DOI: 10.1594/pangaea.972920
title: Air temperature at the upper forest line in the Tatras, station Panszczyca Dno Valley

description: For 12 months, air temperature was measured at a height of 2 m above the ground at the upper forest line in the Tatras. The aim of these studies was to show the relationship between terrain forms (concave and convex) on air temperature. The lowest air temperature value was characteristic of concave terrain forms and in them the upper forest line ran lower than on convex terrain forms.
DOI: 10.1594/pangaea.972985
title: Air temperature at the upper forest line in the Tatras, station Hala Gasienicowa Station

description: For 12 months, air temperature was measured at a height of 2 m above the ground at the upper forest line in the Tatras. The aim of these studies was to show the relationship between terrain forms (concave and convex) on air temperature. The lowest air temperature value was characteristic of concave terrain forms and in them the upper forest line ran lower than on convex terrain forms.
DOI: 10.1594/pangaea.972986
title: Air temperature at the upper forest line in the Tatras, station Wyplaszczenie - Flattening

description: For 12 months, air temperature was measured at a height of 2 m above the ground at the upper forest line in the Tatras. The aim of these studies was to show the relationship between terrain forms (concave and convex) on air temperature. The lowest air temperature value was characteristic of concave terrain forms and in them the upper forest line ran lower than on convex terrain forms.
DOI: 10.1594/pangaea.972923
title: Air temperature at the upper forest line in the Tatras, station Karczmisko

description: For 12 months, air temperature was measured at a height of 2 m above the ground at the upper forest line in the Tatras. The aim of these studies was to show the relationship between terrain forms (concave and convex) on air temperature. The lowest air temperature value was characteristic of concave terrain forms and in them the upper forest line ran lower than on convex terrain forms.
DOI: 10.1594/pangaea.972924
title: Air temperature at the upper forest line in the Tatras, station Karlowicz

description: For 12 months, air temperature was measured at a height of 2 m above the ground at the upper forest line in the Tatras. The aim of these studies was to show the relationship between terrain forms (concave and convex) on air temperature. The lowest air temperature value was characteristic of concave terrain forms and in them the upper forest line ran lower than on convex terrain forms.
DOI: 10.1594/pangaea.972926
title: Air temperature at the upper forest line in the Tatras, station Panszczyca W Valley

description: For 12 months, air temperature was measured at a height of 2 m above the ground at the upper forest line in the Tatras. The aim of these studies was to show the relationship between terrain forms (concave and convex) on air temperature. The lowest air temperature value was characteristic of concave terrain forms and in them the upper forest line ran lower than on convex terrain forms.
DOI: 10.1594/pangaea.972929
title: Air temperature at the upper forest line in the Tatras, station Rynna Dno Las

description: For 12 months, air temperature was measured at a height of 2 m above the ground at the upper forest line in the Tatras. The aim of these studies was to show the relationship between terrain forms (concave and convex) on air temperature. The lowest air temperature value was characteristic of concave terrain forms and in them the upper forest line ran lower than on convex terrain forms.
DOI: 10.1594/pangaea.973000
title: Record of sun coral (Tubastraea spp.) polyps attached to Parribacus antarcticus on the South Atlantic coast of Brazil (~8S)

description: This video shows the sun coral (Tubastraea spp.) attached to the carapace of an adult a sculptured slipper lobster (Parribacus antarcticus). This recording was made with an underwater camera during a technical dive, in the mooring dolphins (8°23'55.445S 34°57'12.435W), at a depth of 7 meters on June 28, 2023 in Suape Harbor, Pernambuco, off the northeast coast of Brazil. The dive was being carried out to inspect the mooring dolphins and, during the inspection, the lobster with the sun coral polyps on its carapace was observed. The sun coral is an invasive species that can have a serious impact on native biota, and the record of its occurrence in a mobile organism is unique, which implies the need to include the inspection of live animals in monitoring protocols.
description: We would like to thank the Diretoria de Meio Ambiente e Sustentabilidade de SUAPE (Complexo Industrial Portuário Governador Eraldo Gueiros) and DBF Planejamento e Consultoria for supplying the material used and providing the necessary logistic support. We also thank the diver Francisco Alan Bernardo de Oliveira Alves for the underwater video.
DOI: 10.1594/pangaea.972931
title: Air temperature at the upper forest line in the Tatras, station Rynna E Las

description: For 12 months, air temperature was measured at a height of 2 m above the ground at the upper forest line in the Tatras. The aim of these studies was to show the relationship between terrain forms (concave and convex) on air temperature. The lowest air temperature value was characteristic of concave terrain forms and in them the upper forest line ran lower than on convex terrain forms.
DOI: 10.1594/pangaea.972937
title: Air temperature at the upper forest line in the Tatras, station Rynna W Las

description: For 12 months, air temperature was measured at a height of 2 m above the ground at the upper forest line in the Tatras. The aim of these studies was to show the relationship between terrain forms (concave and convex) on air temperature. The lowest air temperature value was characteristic of concave terrain forms and in them the upper forest line ran lower than on convex terrain forms.
DOI: 10.1594/pangaea.892720
title: Raw multibeam EM122 data: transits of METEOR cruise M148 (South Atlantic)

description: Latitude/Longitude extracted from DSHIP. Data acquisition was performed using a multibeam sonar system Simrad EM-122 from Kongsberg. Raw data are delivered within Simrad current multibeam vendor format. SIMRAD raw data can be processed i.e. with the software packages CARIS HIPS/SIPS, Caraibes, QPS Qimera or with the open source software package MB-System (http://www.ldeo.columbia.edu/res/pi/MB-System/).These data should not be used for navigational purposes.
DOI: 10.1594/pangaea.853863
title: Fatty acid composition of calanoid copepods in the open eastern Atlantic Ocean during POLARSTERN cruise ANT-XXIX/1

description: The parameters number 13 and 14, lipids and dry mass, were erroneously marked as "per individual" in [µg/#]. This mistake was corrected on the 2016-05-12. The values are not per individual but the sum of all measured individuals.
DOI: 10.1594/pangaea.889465
title: Fatty acid profiles in the Canary Current upwelling system (CBi) in 2010 and 2011, stations GeoB14202 and GeoB15703

description: Authors withdrew this dataset, please refrain from using it!
DOI: 10.1594/pangaea.892197
title: Responses of intertidal sediments to simulated warming and epi-faunal loss in a mesocosm: surficial sediment microbial Polar Lipid Fatty Acid (PLFA) profiles.
DOI: 10.1594/pangaea.962841
title: Desmophyllum dianthus relative and absolute fatty acid and fatty alcohol composition in Comau Fjord, Chile

description: In September 2016 specimens of the cold-water coral Desmophyllum dianthus were sampled along natural oceanographic horizontal and vertical gradients (vertically: 20 m and 280 m depth and horizontally: fjord head, center, and mouth) in Comau Fjord to study its fatty acids composition. The aim was to understand better a) how the fatty acid composition changes in response to the experienced in situ environmental conditions, b) if they can provide insights into the potential food sources, and c) how the coral phenotype affects their composition. The background environment conditions and the coral's physiological performance were derived from previous assessments (Beck et al. 2022, doi:10.1594/PANGAEA.945072), and additional CTD casts were performed in September 2016 (doi:10.1594/PANGAEA.962593).
DOI: 10.1594/pangaea.757372
title: Total phospholipid fatty acid concentrations structrures of ODP Hole 191-1179 samples (Table 1)

description: Sediment samples ranging from 0.05 to 278 m below sea floor (mbsf) at a Northwest Pacific deep-water (5564 mbsl) site (ODP Leg 191, Site 1179) were analyzed for phospholipid fatty acids (PLFAs). Total PLFA concentrations decreased by a factor of three over the first meter of sediment and then decreased at a slower rate to approximately 30 mbsf. The sharp decrease over the first meter corresponds to the depth of nitrate and Mn(IV) reduction as indicated by pore water chemistry. PLFA-based cell numbers at site 1179 had a similar depth profile as that for Acridine orange direct cell counts previously made on ODP site 1149 sediments which have a similar water depth and lithology. The mole percentage of straight chain saturated PLFAs increases with depth, with a large shift between the 0.95 and 3.95 mbsf samples. PLFA stable carbon isotope ratios were determined for sediments from 0.05 to 4.53 mbsf and showed a general trend toward more depleted d13C values with depth. Both of these observations may indicate a shift in the bacterial community with depth across the different redox zones inferred from pore water chemistry data. The PLFA 10me16:0, which has been attributed to the bacterial genera Desulfobacter in many marine sediments, showed the greatest isotopic depletion, decreasing from -20 to -35 per mil over the first meter of sediment. Pore water chemistry suggested that sulfate reduction was absent or minimal over this same sediment interval. However, 10me16:0 has been shown to be produced by recently discovered anaerobic ammonium oxidizing (anammox) bacteria which are known chemoautotrophs. The increasing depletion in d13C of 10me16:0 with the unusually lower concentration of ammonium and linear decrease of nitrate concentration is consistent with a scenario of anammox bacteria mediating the oxidation of ammonium via nitrite, an intermediate of nitrate reduction.
description: Supplement to: Mills, Christopher T; Dias, Robert F; Graham, Dennis; Mandernack, Kevin W (2006): Determination of phospholipid fatty acid structures and stable carbon isotope compositions of deep-sea sediments of the Northwest Pacific, ODP site 1179. Marine Chemistry, 98(2-4), 197-209
DOI: 10.1594/pangaea.897429
title: Oxygen, hydrogen sulfide and hydrogen phosphate in water column at the station BY15 in Eastern Gotland Basin in 2014 and 2016
DOI: 10.1594/pangaea.889464
title: Fatty acid profiles in the Canary Current upwelling system (CB) in 2010 and 2011, stations GeoB14201 and GeoB15709

description: Authors withdrew this dataset, please refrain from using it!
DOI: 10.1594/pangaea.889466
title: Fatty acid profiles in the Canary Current upwelling system (Continental Margin) in 2010 and 2011, stations GeoB14207 and GeoB15704

description: Authors withdrew this dataset, please refrain from using it!
DOI: 10.1594/pangaea.788676
title: (Table T2) Mole percentages of phospholipid fatty acids in ODP Site 169-1036 sediments

description: Sediment depth is given in mbsf. The most abundant PLFAs in Section 169-1036C-4H-5 were 16:0 (26%), 18:0 (37%), cy17:0 (28%), and a polyenoic 18-carbon PLFA (8%).
DOI: 10.1594/pangaea.892194
title: Responses of intertidal sediments to simulated warming and epi-faunal loss in a mesocosm: surficial sediment 13C-labelled microbial Polar Lipid Fatty Acid (PLFA) profiles
DOI: 10.1594/pangaea.775330
title: (Table T2) Phospholipid fatty acid components in sediments of three ODP Leg 205 sites

description: Sample 205-1255A-2R-2,43-48 contains drilling slurry.
DOI: 10.6084/m9.figshare.c.3629678_d4.v1
title: Additional file 1: of Discovery and replication of a peripheral tissue DNA methylation biosignature to augment a suicide prediction model

description: Title: GenRED Offspring Blood Cortisol Associated Probes. Description: Table containing all probes nominally associated with AUC weekday cortisol in the GenRED Offspring blood cohort (Nâ  =â  18) with the corresponding regression coefficient (Î˛) and p-value. (XLSX 860 kb)
DOI: 10.1594/pangaea.967135
title: Images of 376 individuals of common toads (Bufo bufo) from southern Lower Saxony, Germany

description: During the spring seasons of 2022 and 2023 a conservation effort in southern Lower Saxony, Germany led to the rescue of more than 400 toads at a local lake. As there is currently no public dataset about toads available, these animals were recorded on video, before they were released at their natural habitats. The result of this effort is a comprehensive dataset containing 7,245 unique images, representing 376 distinct individuals of common toads. These images are categorized according to five different camera orientations: top, front, back, left, and right.
description: The dataset contains 7245 unique images from different angles, representing 376 distinct individuals of common toads (Bufo bufo). All images can be downloaded as a zip file with a size of 3.2 GBytes.