cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/2s75kgnzd7
title: Synthetic disjoint and overlapping dynamic attributed networks with ground-truth information

description: 1. Synthetic network 1: We use the synthetic benchmark DANCer to create 12 datasets with ten timestamps for attributed graphs with undirected edges that can change over time, where nodes are grouped into densely connected sets, relatively homogeneous according to the attributes. The number of nodes starts at 256 nodes, the number of communities at 5, and the number of edges at 1000 increases over time, ending with a maximum value of 1868 nodes, ten communities, and 11905 edges among the built networks.

2. Synthetic network 2: Graphs were built with 200 nodes and 20 snapshots. In the initialization, the nodes are divided into two groups, each with 100 nodes. Then, at a randomly selected time step, 40 % of the nodes are chosen to migrate to a new community in Dataset 1, and 80 % in Dataset 2. The membership of each node is chosen according to a stochastic block model, where nodes within the same community are connected with a probability of 0.3 and the edges between communities are drawn with a probability of 0.1.

3. Synthetic network 3: We generated ten timestamps with growing and shrinking communities. We designed three datasets with three groups of 80, 90, and 100 nodes. A degree-corrected stochastic block model generates the network structure. Three types of attributed networks were proposed, with different original link probabilities, to assess strongly assortative structures (Dataset 1), weakly assortative structures (Dataset 2), and disassortative structures (Dataset 3). 

4. Overlapping synthetic networks: Using Greene's benchmark, we create eleven overlapping datasets with ten snapshots. Each network has 250 nodes, overlapping nodes from 0 to 50, and overlapping memberships from 2 to 25. Specific kinds of changes in communities of a dynamic network were simulated:

- Birth and death: There are two birth events per time step and two death events per time step. Dataset 1 has no overlapping nodes; Dataset 2 has five overlapping nodes and two overlapping memberships; Dataset 3 has ten overlapping nodes and two overlapping memberships; Dataset 4 has 25 overlapping nodes and two overlapping memberships; Dataset 5 has 50 overlapping nodes and two overlapping memberships; Dataset 6 has five overlapping nodes and five overlapping memberships; Dataset 7 has five overlapping nodes and ten overlapping memberships; Dataset 8 has five overlapping nodes and 25 overlapping memberships.

- Merge and split: With two merge events per time step and two split events per time step. Dataset 9 has five overlapping nodes and two overlapping memberships.

- Expansion and contraction: With two expansion events per time step and two contraction events per time step, with a rate of 0.1. Dataset 10 has five overlapping nodes and two overlapping memberships.

- Node switching between communities: With a probability of 0.2 for a node to switch its community membership. Dataset 11 has five overlapping nodes and two overlapping memberships.
DOI: 10.17632/2spxnp7k93
title: MINUIT subroutine for spectra deconvolution

description: Abstract In the first part of this paper we present a FCN subroutine of the program MINUIT (developed in CERN Geneva by F. James and M. Roos) able to perform deconvolutions of experimental curves in up to 13 peaks. The number of peaks, their analytical dependence and their symmetry can be defined interactively by the user. In the second part different examples are given which demonstrate the high degree of versatility of this software. Title of program: ASYMGRAD Catalogue Id: ACJL_v1_0 Nature of problem The deconvolution of experimental spectra can be reduced to a problem of least squares and solved by MINUIT [1] minimization routines [2,3,4]. Versions of this program held in the CPC repository in Mendeley Data ACJL_v1_0; ASYMGRAD; 10.1016/0010-4655(93)90110-X This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/4dxrbn9xsh
title: LINF_330015900

description: hypothetical protein - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/5tbtdd2f5r
title: LINF_330014100

description: 60S ribosomal protein L6; Leishmania infantum
DOI: 10.17632/c44rsbnz5v
title: Adult rat jejunum and liver histological measurements and gene expression after perinatal exposure 5-hydroxytryptophan and tranylcypromine

description: Maintaining serotonin (5HT) homeostasis is vital for physiological processes in the central nervous system and peripheral tissues. Hyperserotonemia, a measurable sign of 5HT homeostasis disruption that can be caused by 5HT-directed treatments for psychiatric and gastrointestinal disorders, has unresolved implications for long-term 5HT equilibrium in the periphery. This study investigates perinatal 5HT imbalance effects on jejunum and liver in adult rats. Hyperserotonemia was induced by 5-hydroxytryptophan (5HTP) or tranylcypromine (TCP) treatment. At postnatal day 70, jejunum and liver samples were analyzed. Compared to controls, 5HTP and TCP-treated rats showed reduced 5HT-producing cells and decreased jejunum 5HT-synthesizing enzyme expression. Additionally, there was increased 5HT transporter expression with hepatocyte karyomegaly, more pronounced in TCP-treated animals. This study reveals lasting cellular and molecular changes due to perinatal 5HT imbalance, potentially impacting 5HT availability in the periphery. The rat model links developmental serotonin abnormalities to adult 5HT-related changes, offering insights into susceptibility to behavioral and metabolic disorders. It serves as a model for exploring adverse effects of prenatal exposure to 5HT enhancers in humans.

The study involved a two-step chronic treatment of animals with either of the two 5HT enhancers—5-hydroxytryptophan (5HTP) and tranylcypromine (TCP)—or saline. In the first step, pregnant females (3 with each 5HT enhancer and 2 with saline) were treated from gestational day 12 until parturition. In the second step, pups (13 with TCP, 13 with 5HTP, and 11 with saline) were treated from postnatal day (PND) 1 until PND21. At PND70, blood, jejunum, and liver samples were collected from all experimental and control rats. Serum 5HT concentrations were measured with ELISA, and jejunum and liver tissues were examined histomorphologically. The relative expression of genes related to the serotonin pathway proteins, including tryptophan hydroxylase 1 (Tph1) and vesicular monoamine transporter 1 (Vmat1) responsible for serotonin synthesis and storage in the jejunum, and serotonin transporter (5HTt) and monoamine oxidase A (MaoA) responsible for 5HT elimination in the liver, was determined via quantitative PCR.
DOI: 10.17632/d9xwzjsprp
title: LDHU3_16.0550

description: 60S ribosomal protein L21 | eL21; Leishmania donovani (HU3 strain)
DOI: 10.17632/dc3t6mch53
title: Trait-specific groups of aquatic macrophytes respond differently to eutrophication of unshaded lowland streams

description: This dataset contains information on 30 streams located on the North Island in Aotearoa New Zealand. The dataset comprises quantification of plant communities in the streams as well as physicochemical parameters acquired in-situ and from national databases. Please read the abstract from the accompanying paper below:
Understanding eutrophication effects on stream macrophytes is key to meaningful environmental management and governance. However, the response of macrophyte communities to eutrophication is complex and often the effect of eutrophication is obscured by habitat variability.
In this study we quantified macrophyte community composition and abundance along a eutrophication gradient in 30 lowland streams. We selected slow flowing, medium sized streams with minimal shading, to focus on examining water quality effects. We measured the internal nutrient status of the plants and the bioavailable nutrient fraction of the sediment and used a national database of modelled stream descriptors to obtain information about land use and other water quality variables. We statistically examined relationships between macrophyte community composition and abundance and nutrient, underwater light, carbon availability and disturbance along the eutrophication gradient. 
We found that macrophytes with different growth strategies were related to different aspects of eutrophication. An increased abundance of submerged species was associated with elevated water column phosphorus (P) and alkalinity, while increased abundance of emergent species was associated with high sediment P, nitrate (N) and low disturbance. 
We did not find a relationship between nutrient inputs and nutrient content of the macrophytes but did find that sediment P correlated with P inputs to streams. We also observed that non-native taxa dominated eutrophic streams. 
Our results indicate that 1) non-native species are common in unshaded lowland streams with low water clarity and high nutrient and bicarbonate availability; 2) emergent species are associated with high nitrogen availability and suspended sediment and 3) submerged species prevail where phosphorus and bicarbonate availability is high. Our findings improve understanding of how stream macrophyte communities respond to changes in water quality related to eutrophication and anthropogenic changes in catchments and will contribute to an informed management of macrophytes in streams.
For method details please see the paper.
DOI: 10.17632/dw867yc7cb
title: LINF_360045700

description: mitogen activated kinase-like protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/mx3nswk5jg
title: LDHU3_11.0110

description: Seryl-tRNA synthetase | SerRS; Leishmania donovani (HU3 strain)
DOI: 10.17632/n6gtwn67yb
title: Para Table Tennis VO2

description: Energy expenditure and HR data during Para Table Tennis.
DOI: 10.17632/z3trvbj5gf
title: Source data for TRN paper

description: a
DOI: 10.17632/73ccz593dc
title: LITERATURE REVIEW - BEHAVIORAL ANALYSIS OF CULTURE IN BRAZIL

description: This dataset shows articles, dissertations, and theses published by Brazilian psychology graduate programs, on Behavioral Analysis of Culture in the period of 1987 to 2020.
DOI: 10.17632/dy79j7bgnf
title: AvoStemsDB

description: The image set consists of 133 images grouped into two classes of diseased and healthy stems with a distribution of 65 and 68 images respectively. Each image has a dimension of 500 x 400 pixels with a depth of 96 dpi and a .jpg extension.
DOI: 10.17632/fpvzf6bjbs
title: LDHU3_15.1260

description: Protein phosphatase 2A regulatory subunit; Leishmania donovani (HU3 strain)
DOI: 10.17632/j92bjksxkp
title: LINF_150016100

description: Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) Leishmania infantum (strain JPCM5)
DOI: 10.17632/mr5h7xfknb
title: Identification of Substrates of MBL Associated Serine Protease-1 (MASP-1) from Human Plasma using N-terminomics Strategy

description: Human blood was drawn from healthy adult volunteers after taking their informed consent. The study was approved by the institutional ethics committee, Ref. No. All India Institute of Medical sciences (AIIMS) /Patna/Institutional Ethics Committee/2019/413. All the experimental work was done in accordance with the relevant guidelines and regulations. Acid-citrate-dextrose (ACD) was used as an anticoagulant (6 vol. of blood to 1 vol. of ACD). Platelet-rich plasma was obtained by centrifuging the ACD blood at 200 g for 15 min. This was followed by plasma depletion of albumin and Immunoglobulin G (IgG) using antibody-based Abundant Protein Depletion Spin Columns (Pierce, Thermo Fisher, MA, USA). The antibodies were specific to the Fc domain of immunoglobulins.
DOI: 10.17632/ngpmm29yx9
title: Cell Metabolism preview Dataset-ZH

description: This dataset is for preliminary evaluation and peer review during my submission to Cell Metabolism
DOI: 10.17632/t35368bdhv
title: Tiruchirappalli_LST

description: The dataset contains satellite images (Landsat and MODIS) and research findings of LST estimation for the year 2000 and 2019. The research has been carried out for Tiruchirappalli district, Tamil Nadu, India.
DOI: 10.17632/tnt76rprxr
title: Moral foundation framing’s influence on support for familiar and unfamiliar climate change mitigation policies in the United States.

description: Dataset for this paper
DOI: 10.17632/vdt5jhmw27
title: Time Course of Metabolic Alterations Associated with the Progression of Systemic Lupus Erythematosus in MRL/lpr Mice Based on GC/MS

description: Serum metabolomics based on gas chromatography/mass spectrometry (GC/MS) was employed to investigate the metabolic alterations at different stages of SLE using lupus-prone mice (MRL/lpr) and age-matched C57BL/6 mice at 9, 11 and 13 weeks of age.
DOI: 10.17632/29wp6g7trr
title: Structural snapshots uncover a key phosphorylation motif in GPCRs driving β-arrestin activation

description: Raw data for the figures associated with this manuscript.
DOI: 10.17632/9n52g5yp6n
title: Bioprocess Eco-design Metrics: Predicting Manufacturing Carbon Footprint During Development

description: This study addresses the urgent need to mitigate the climate crisis through actionable strategies in the biopharmaceuticals sector. Given the significant environmental impact associated with biologics manufacturing, particularly concerning carbon emissions, this paper explores the effectiveness of bioprocess eco-design metrics, especially process mass intensity (PMI), in predicting and reducing the carbon footprint during early process development. We utilized the BioSolve Process software application, a widely used tool for techno-economic assessment, and existing industry benchmarks to critically assess PMI's capacity to inform eco-friendly design choices in manufacturing monoclonal antibody bulk drug substance (BDS). This assessment includes a discussion of PMI's limitations, such as its lack of consideration for energy usage – a significant oversight given the energy-intensive nature of cleanroom operations. Considering these insights, the paper proposes alternative metrics, aligning with a streamlined cradle-to-gate Life Cycle Assessment (LCA) methodology, to better capture the environmental impacts of biologics production. The aim is to provide a more comprehensive framework for the biopharmaceutical industry to achieve significant reductions in carbon emissions, aligning with global sustainability goals and corporate expectations for net-zero transitions.
DOI: 10.17632/f5jnk2vt2g
title: Data for: Syn- and post-plateau volcanism of Ojin Rise Seamounts adjoining Shatsky Rise

description: Initial (0) and age-corrected (120 Ma) Sr, Nd, Pb, and Hf isotope data and parent-daughter element concentrations from the same sample aliquot (in ppm).
DOI: 10.17632/kbd8f3sx73
title: LINF_270020900

description: Snf7
Leishmania infantum (strain JPCM5)
DOI: 10.17632/krhv4n28cg
title: Prevalence of the sublingual varices and their association with local and sistemics factors in a group of patiens who goes to the Dr. René Puig Bentz dental clinic of UNPHU.

description: The study aimed to witness first-hand whether sublingual varicose veins are associated with local factors such as smoking or bruxism and general factors such as hypertension. To carry out the study, a sample of 222 patients was used, to whom an intraoral clinical examination was performed to detect oral varicose veins, blood pressure was taken at two moments of the clinical examination, and intraoral clinical photographs to demonstrate. the presence of varicose veins. These data were processed in the Statistical Package for the Social Sciences (SPSS) software. The result was that 91 patients presented oral varicose veins of these, 85 corresponded to sublingual varicose veins, which showed an association with bruxism and high blood pressure, so sublingual varicose veins can be considered a sign of these factors. Bruxism turned out to be a new finding, which had not been previously reported in the literature, this was quite interesting for the study because according to its characteristics, it did not seem to be a factor related to the vascular system, instead it is required that due to the forces exerted by bruxomaniacs patients, the vertical dimension is reduced, affecting the soft tissues and, therefore, resulting in the appearance of varicose veins. Obtaining these data highlights the importance of the intraoral clinical examination during the dental consultation, thus demonstrating the importance of carrying out a thorough evaluation, without overlooking clinical signs that may have clinical relevance.
DOI: 10.17632/m7xfrdvvjv
title: “Effectiveness of Task-Oriented Circuit Training (TOCT) on the Motor Performance of Ischemic Stroke Patients

description: The dataset is a collection of documents that was used to conduct a RCT to evaluate the efficacy of a novel therapeutic approach "Task-Oriented Circuit Training (TOCT)" for ischemic stroke patients.
DOI: 10.17632/sjrh9gs6rk
title: Analytical insights: Detection and quantification of α-amanitin in wild mushrooms using RP-HPLC-PDA method for food safety purposes

description: Reference fungal taxa in the database and the list of species, voucher number, GenBank accession number and locality used for the analysis
DOI: 10.17632/tjvwbhhjg5
title: LINF_320043300

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/w2wzjzfx2x
title: Microcystin-LR sensitizes the Oncorhynchus mykiss intestinal epithelium and alters the oxidative balance synergistically with paralytic shellfish toxins.

description: The dataset corresponds to the results of an unpublished original research article titled "Microcystin-LR sensitizes the Oncorhynchus mykiss intestinal epithelium and alters the oxidative balance synergistically with paralytic shellfish toxins." written by Julio C. Painefilú, Carolina González, Bernd Krock, Flavia Bieczynski, and Carlos M. Luquet.
DOI: 10.17632/ww33668rn3
title: Editing certificate 

description: Editing certificate
DOI: 10.17632/z3rgb2k6vt
title: Machine learning on white mica short-wave infrared (SWIR) spectral data in the Tengjia Au deposit, Jiaodong peninsula (Eastern China): A prospecting indicator for lode gold deposits

description: The repository contains raw data for the following of Tengjia Au deposit, Jiaodong peninsula, China:
 Appendix I. Short-wave infrared spectral parameters of samples
 Appendix Ⅱ. Corresponding relationship between the standardized reflectivity of SWIR bands of white mica and orebodies
 Appendix Ⅲ. Three-dimensional model of Pos2200
 Appendix Ⅳ. Three-dimensional model of IC value
DOI: 10.17632/6pd7f8zc9h
title: Data for: Early-Middle Permian southward subduction of the eastern Paleo-Asian Ocean: Constraints from geochronology and geochemistry of intermediate-acidic volcanic rocks in the northern margin of the North China Craton

description: Supplementary Table 1. LA-ICP-MS U-Pb zircon data for the early-middle Permian intermediate-acidic volcanic rocks in the northern margin of the NCC Supplementary Table 2. Major (wt.%) and trace (ppm) elements for the early-middle Permian intermediate-acidic volcanic rocks in the northern margin of the NCC Supplementary Table 3. In situ zircon Hf isotopic compositions for the early-middle Permian intermediate-acidic volcanic rocks in the northern margin of the NCC
DOI: 10.17632/h4chjzxzh2
title: Comparative Analysis of the in-vitro Susceptibility of Salmonella Typhi to Chloramphenicol and Leaf Extracts of Moringa Oleifera

description: This study compared the in-vitro susceptibility of Salmonella typhi to Chloramphenicol and Moringa oleifera leaf extracts. Ethanol and ether extracts of the leaves showed activity, while hot and cold water extracts did not. Chloramphenicol demonstrated higher in-vitro activity against Salmonella typhi than the leaf extracts.
DOI: 10.17632/jnpxykjht5
title: drying-ozonation process, curves drying, modeling mathematical

description: Chung-Pfost model choose RU (moisture ration = MR) dates in portuguese questions? suiangranella@hotmail.com
DOI: 10.17632/mrfdybztv5
title: LINF_240020400

description: PWP1
Leishmania infantum (strain JPCM5)
DOI: 10.17632/w7vkhrp62r
title: Dataset for: In the bleak mid-winter: The value of brownfield sites for birds during the winter

description: This data was used to investigate the value of brownfields sites for birds during the winter in the metropolitan county of Greater Manchester in the UK by 1) calculating bird diversity (species richness and species evenness) and bird density estimates 2) investigating bird-habitat associations for brownfield sites, and making comparisons with other broad land-uses. Moreover, the data was used to explore the extent to which brownfield sites have been recipient to land-use change in the county in comparison to other land-uses in order to make broad inferences regarding the impact on bird density during the winter. This was undertaken from the year 2000 to 2009, a period of prolific urban redevelopment within the county. Specifically, the dataset includes records of the birds present in six land-use categories (brownfield sites, green space, pre-2000 housing, post-2000 housing, industrial, commercial) in Greater Manchester during winter 2010. In addition, it includes data regarding the land coverage of the aforementioned land-uses in Greater Manchester for 2000 and 2009. 

Methodology:

171 x 1 km grid squares were identified within the M60 ‘ring-road’ motorway, and two sampling locations were chosen randomly in each square. The land-use present at each sampling location was identified by eye using aerial images from Google Earth and categorised into one of six categories (brownfield site, green space, pre-2000 housing, post-2000 housing, industrial, commercial). A point count took place at each sampling location to record all birds seen and heard, together with an on-site habitat survey which recorded the presence/absence of 14 tree and shrub species within 20 m of the sampling location. Land-cover variables were also recorded within 200 m of each sampling location using Google Earth images. This was achieved by superimposing a 10 x 10 square grid (each square measured 20 x 20 m) over Google Earth images, centred above each sampling location. From here, the area of grass, tree, water, and impervious land cover was measured by quantifying the percentage of cross points that fell onto each type of land cover. In order to quantify changes in the land coverage of the six land-uses between 2000 and 2009, the 1 km squares were further subdivided into 5x5 squares and the land-use at each cross-point was identified for both years using the historical image function on Google Earth. The area of land in the study area covered by each land-use was calculated for both years.
DOI: 10.17632/yhhxdvjdbd
title: Incidence of initial and recurrent herpes zoster among aged 50 and older population: a prospective study in Chinese community residents

description: Supplementary Materials
DOI: 10.17632/z5zw9v3d7k
title: Data for: To assess the efficacy of a vein visualizing device in patients at risk of difficult phlebotomy

description: This is data of the veins counted by phlebotomist on difficult for intravenous (IV) access. They are the children, obese and patients admitted for frequent IV medications like those with severe infections or on chemotherapy +++++++++++
DOI: 10.17632/2kzvvz6rpn
title: Tourism and environment : G7

description: Explains data on tourism and environment along with major macro variables
DOI: 10.17632/5jty4jfr4s
title: LINF_270019400

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/64pxn62w75
title: Data for: Does it Pay to Bet on Your Favourite to Win? Evidence on Experienced Utility from the 2018 FIFA World Cup Experiment