cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3544493
title: Appendix A. Photograph of mountain pine cones in the Pyrenees.

description: Photograph of mountain pine cones in the Pyrenees.
DOI: 10.6084/m9.figshare.3544496.v1
title: Appendix B. A table of results from MANOVA and univariate ANOVAs testing the effect of nonconsumptive Dytiscus beetle presence and caddisfly sex on size at emergence of Asynarchus caddisflies.

description: A table of results from MANOVA and univariate ANOVAs testing the effect of nonconsumptive Dytiscus beetle presence and caddisfly sex on size at emergence of Asynarchus caddisflies.
DOI: 10.6084/m9.figshare.3544493.v1
title: Appendix A. Photograph of mountain pine cones in the Pyrenees.

description: Photograph of mountain pine cones in the Pyrenees.
DOI: 10.6084/m9.figshare.3544490
title: Appendix B. Information on the year, sampling period, and type of data recorded in the study sites in the Pyrenees and the Iberian System.

description: Information on the year, sampling period, and type of data recorded in the study sites in the Pyrenees and the Iberian System.
DOI: 10.6084/m9.figshare.3544490.v1
title: Appendix B. Information on the year, sampling period, and type of data recorded in the study sites in the Pyrenees and the Iberian System.

description: Information on the year, sampling period, and type of data recorded in the study sites in the Pyrenees and the Iberian System.
DOI: 10.6084/m9.figshare.3544487
title: Appendix C. Multivariate and univariate nonlinear selection coefficients for phenotypic selection exerted by crossbills on mountain pine in the Pyrenees.

description: Multivariate and univariate nonlinear selection coefficients for phenotypic selection exerted by crossbills on mountain pine in the Pyrenees.
DOI: 10.6084/m9.figshare.3544487.v1
title: Appendix C. Multivariate and univariate nonlinear selection coefficients for phenotypic selection exerted by crossbills on mountain pine in the Pyrenees.

description: Multivariate and univariate nonlinear selection coefficients for phenotypic selection exerted by crossbills on mountain pine in the Pyrenees.
DOI: 10.6084/m9.figshare.3544484
title: Appendix D. Multivariate and univariate nonlinear selection coefficients for phenotypic selection exerted by red squirrels on mountain pine in the Pyrenees.

description: Multivariate and univariate nonlinear selection coefficients for phenotypic selection exerted by red squirrels on mountain pine in the Pyrenees.
DOI: 10.6084/m9.figshare.3544484.v1
title: Appendix D. Multivariate and univariate nonlinear selection coefficients for phenotypic selection exerted by red squirrels on mountain pine in the Pyrenees.

description: Multivariate and univariate nonlinear selection coefficients for phenotypic selection exerted by red squirrels on mountain pine in the Pyrenees.
DOI: 10.6084/m9.figshare.3544481
title: Appendix E. Mean mountain pine cone measurements for sites in the Pyrenees and the Iberian System.

description: Mean mountain pine cone measurements for sites in the Pyrenees and the Iberian System.
DOI: 10.6084/m9.figshare.3544481.v1
title: Appendix E. Mean mountain pine cone measurements for sites in the Pyrenees and the Iberian System.

description: Mean mountain pine cone measurements for sites in the Pyrenees and the Iberian System.
DOI: 10.6084/m9.figshare.3544478
title: Appendix A. Species codes and identities.

description: Species codes and identities.
DOI: 10.6084/m9.figshare.3544478.v1
title: Appendix A. Species codes and identities.

description: Species codes and identities.
DOI: 10.6084/m9.figshare.3544475
title: Appendix B. Dissimilarity dendrograms for ant species in Networks 1990 and 2000.

description: Dissimilarity dendrograms for ant species in Networks 1990 and 2000.
DOI: 10.6084/m9.figshare.3544475.v1
title: Appendix B. Dissimilarity dendrograms for ant species in Networks 1990 and 2000.

description: Dissimilarity dendrograms for ant species in Networks 1990 and 2000.
DOI: 10.6084/m9.figshare.3544472
title: Appendix C. Dissimilarity dendrograms for plant species for Networks 1990 and 2000.

description: Dissimilarity dendrograms for plant species for Networks 1990 and 2000.
DOI: 10.6084/m9.figshare.3544472.v1
title: Appendix C. Dissimilarity dendrograms for plant species for Networks 1990 and 2000.

description: Dissimilarity dendrograms for plant species for Networks 1990 and 2000.
DOI: 10.6084/m9.figshare.3544469
title: Appendix A. Rank–biomass diagrams for ants in each of the 12 study sites.

description: Rank–biomass diagrams for ants in each of the 12 study sites.
DOI: 10.6084/m9.figshare.3544466
title: Appendix B. Species richness for each successional stage before and after filtering of species lists.

description: Species richness for each successional stage before and after filtering of species lists.
DOI: 10.6084/m9.figshare.3544463
title: Appendix A. Proportional plant species cover across wet and dry treatments.

description: Proportional plant species cover across wet and dry treatments.
DOI: 10.6084/m9.figshare.3544463.v1
title: Appendix A. Proportional plant species cover across wet and dry treatments.

description: Proportional plant species cover across wet and dry treatments.
DOI: 10.6084/m9.figshare.3544460
title: Appendix B. Enzyme activities in plant community soils and in plant-specific soils.

description: Enzyme activities in plant community soils and in plant-specific soils.
DOI: 10.6084/m9.figshare.3544460.v1
title: Appendix B. Enzyme activities in plant community soils and in plant-specific soils.

description: Enzyme activities in plant community soils and in plant-specific soils.
DOI: 10.6084/m9.figshare.3544457
title: Appendix C. Results from ANOVA testing the effects of climate-change treatments on extracellular enzyme activities in plant community soils and in plant-specific soils.

description: Results from ANOVA testing the effects of climate-change treatments on extracellular enzyme activities in plant community soils and in plant-specific soils.
DOI: 10.6084/m9.figshare.3544457.v1
title: Appendix C. Results from ANOVA testing the effects of climate-change treatments on extracellular enzyme activities in plant community soils and in plant-specific soils.

description: Results from ANOVA testing the effects of climate-change treatments on extracellular enzyme activities in plant community soils and in plant-specific soils.
DOI: 10.6084/m9.figshare.3544454
title: Appendix D. Density of nematodes in plant community soils and in plant-specific soils.

description: Density of nematodes in plant community soils and in plant-specific soils.
DOI: 10.6084/m9.figshare.3544451
title: Appendix E. Results from ANOVA testing the effects of climate change treatments on total number of nematodes and numbers of nematodes per feeding group in plant community soils and in plant-specific soils.

description: Results from ANOVA testing the effects of climate change treatments on total number of nematodes and numbers of nematodes per feeding group in plant community soils and in plant-specific soils.
DOI: 10.6084/m9.figshare.3544451.v1
title: Appendix E. Results from ANOVA testing the effects of climate change treatments on total number of nematodes and numbers of nematodes per feeding group in plant community soils and in plant-specific soils.

description: Results from ANOVA testing the effects of climate change treatments on total number of nematodes and numbers of nematodes per feeding group in plant community soils and in plant-specific soils.
DOI: 10.6084/m9.figshare.3544448
title: Appendix F. Soil moisture content in plant community soils and in plant-specific soils.

description: Soil moisture content in plant community soils and in plant-specific soils.
DOI: 10.6084/m9.figshare.3544445
title: Appendix G. Results from ANOVA testing the effects of the climate-change treatments on soil moisture content in plant community soils and in plant-specific soils.

description: Results from ANOVA testing the effects of the climate-change treatments on soil moisture content in plant community soils and in plant-specific soils.
DOI: 10.6084/m9.figshare.3544445.v1
title: Appendix G. Results from ANOVA testing the effects of the climate-change treatments on soil moisture content in plant community soils and in plant-specific soils.

description: Results from ANOVA testing the effects of the climate-change treatments on soil moisture content in plant community soils and in plant-specific soils.
DOI: 10.6084/m9.figshare.3544442
title: Appendix A. A table of comparisons of removal control and control treatments.

description: A table of comparisons of removal control and control treatments.
DOI: 10.6084/m9.figshare.3544442.v1
title: Appendix A. A table of comparisons of removal control and control treatments.

description: A table of comparisons of removal control and control treatments.
DOI: 10.6084/m9.figshare.3544439
title: Appendix B. A figure showing results of parametric MANOVA tests.

description: A figure showing results of parametric MANOVA tests.
DOI: 10.6084/m9.figshare.3544439.v1
title: Appendix B. A figure showing results of parametric MANOVA tests.

description: A figure showing results of parametric MANOVA tests.
DOI: 10.6084/m9.figshare.3544436
title: Appendix C. A complete list of the shrub arthropod taxa.

description: A complete list of the shrub arthropod taxa.
DOI: 10.6084/m9.figshare.3544436.v1
title: Appendix C. A complete list of the shrub arthropod taxa.

description: A complete list of the shrub arthropod taxa.
DOI: 10.6084/m9.figshare.3544433
title: Appendix D. Two figures depicting additional path-analysis results.

description: Two figures depicting additional path-analysis results.
DOI: 10.6084/m9.figshare.3544433.v1
title: Appendix D. Two figures depicting additional path-analysis results.

description: Two figures depicting additional path-analysis results.
DOI: 10.6084/m9.figshare.3544430
title: Appendix A. Extended discussion of results with particular emphasis on geographic provinces in the study area.

description: Extended discussion of results with particular emphasis on geographic provinces in the study area.
DOI: 10.6084/m9.figshare.3544430.v1
title: Appendix A. Extended discussion of results with particular emphasis on geographic provinces in the study area.

description: Extended discussion of results with particular emphasis on geographic provinces in the study area.
DOI: 10.6084/m9.figshare.3544427
title: Appendix B. Full resolution version of Fig. 4 with annotated version of true-color image including place names.

description: Full resolution version of Fig. 4 with annotated version of true-color image including place names.
DOI: 10.6084/m9.figshare.3544424
title: Appendix A. A table of pollinating bee species observed on Echinacea angustifolia heads.

description: A table of pollinating bee species observed on Echinacea angustifolia heads.
DOI: 10.6084/m9.figshare.3544421
title: Appendix B. Results of analysis of deviance for a generalized linear model with binomial response.

description: Results of analysis of deviance for a generalized linear model with binomial response.
DOI: 10.6084/m9.figshare.3544421.v1
title: Appendix B. Results of analysis of deviance for a generalized linear model with binomial response.

description: Results of analysis of deviance for a generalized linear model with binomial response.
DOI: 10.6084/m9.figshare.3544418
title: Appendix C. A table and a figure showing the relationship between bee visitation per plant per season and two measures of plant reproduction.

description: A table and a figure showing the relationship between bee visitation per plant per season and two measures of plant reproduction.
DOI: 10.6084/m9.figshare.3544418.v1
title: Appendix C. A table and a figure showing the relationship between bee visitation per plant per season and two measures of plant reproduction.

description: A table and a figure showing the relationship between bee visitation per plant per season and two measures of plant reproduction.
DOI: 10.6084/m9.figshare.3544412
title: Appendix A. List of dominant vascular species in the bog, the intermediate fen, and the rich fen.

description: List of dominant vascular species in the bog, the intermediate fen, and the rich fen.
DOI: 10.6084/m9.figshare.3544412.v1
title: Appendix A. List of dominant vascular species in the bog, the intermediate fen, and the rich fen.

description: List of dominant vascular species in the bog, the intermediate fen, and the rich fen.
DOI: 10.6084/m9.figshare.3544409
title: Appendix B. ANOVA tables of species and community responses to nutrient addition in the bog, the intermediate fen, and the rich fen.

description: ANOVA tables of species and community responses to nutrient addition in the bog, the intermediate fen, and the rich fen.
DOI: 10.6084/m9.figshare.3544409.v1
title: Appendix B. ANOVA tables of species and community responses to nutrient addition in the bog, the intermediate fen, and the rich fen.

description: ANOVA tables of species and community responses to nutrient addition in the bog, the intermediate fen, and the rich fen.
DOI: 10.6084/m9.figshare.3544406
title: Appendix C. Detailed description of plant-level production and N efficiency responses of representative vascular species to nutrient addition in the bog, the intermediate fen, and the rich fen.

description: Detailed description of plant-level production and N efficiency responses of representative vascular species to nutrient addition in the bog, the intermediate fen, and the rich fen.
DOI: 10.6084/m9.figshare.3544406.v1
title: Appendix C. Detailed description of plant-level production and N efficiency responses of representative vascular species to nutrient addition in the bog, the intermediate fen, and the rich fen.

description: Detailed description of plant-level production and N efficiency responses of representative vascular species to nutrient addition in the bog, the intermediate fen, and the rich fen.
DOI: 10.6084/m9.figshare.3544403
title: Appendix D. Biomass, production, and N uptake in leaves and wood of dominant shrub species in to response to nutrient addition in the bog, the intermediate fen, and the rich fen.

description: Biomass, production, and N uptake in leaves and wood of dominant shrub species in to response to nutrient addition in the bog, the intermediate fen, and the rich fen.
DOI: 10.6084/m9.figshare.3544403.v1
title: Appendix D. Biomass, production, and N uptake in leaves and wood of dominant shrub species in to response to nutrient addition in the bog, the intermediate fen, and the rich fen.

description: Biomass, production, and N uptake in leaves and wood of dominant shrub species in to response to nutrient addition in the bog, the intermediate fen, and the rich fen.
DOI: 10.6084/m9.figshare.3544400
title: Appendix E. Nitrogen use efficiency and Nitrogen response efficiency in leaves and wood of dominant shrub species in response to nutrient addition in the bog, the intermediate fen, and the rich fen.

description: Nitrogen use efficiency and Nitrogen response efficiency in leaves and wood of dominant shrub species in response to nutrient addition in the bog, the intermediate fen, and the rich fen.
DOI: 10.6084/m9.figshare.3544400.v1
title: Appendix E. Nitrogen use efficiency and Nitrogen response efficiency in leaves and wood of dominant shrub species in response to nutrient addition in the bog, the intermediate fen, and the rich fen.

description: Nitrogen use efficiency and Nitrogen response efficiency in leaves and wood of dominant shrub species in response to nutrient addition in the bog, the intermediate fen, and the rich fen.
DOI: 10.6084/m9.figshare.3544397
title: Appendix A. Photos of Simpson Desert dune swale habitat.

description: Photos of Simpson Desert dune swale habitat.
DOI: 10.6084/m9.figshare.3544397.v1
title: Appendix A. Photos of Simpson Desert dune swale habitat.

description: Photos of Simpson Desert dune swale habitat.
DOI: 10.6084/m9.figshare.3544394
title: Appendix B. Relationship between cumulative grazing index (CGI) and soil pH.

description: Relationship between cumulative grazing index (CGI) and soil pH.
DOI: 10.6084/m9.figshare.3544394.v1
title: Appendix B. Relationship between cumulative grazing index (CGI) and soil pH.

description: Relationship between cumulative grazing index (CGI) and soil pH.
DOI: 10.6084/m9.figshare.3544391
title: Appendix C. Nonsignificant relationships from statistical models and Kendall's tau correlation tests.

description: Nonsignificant relationships from statistical models and Kendall's tau correlation tests.
DOI: 10.6084/m9.figshare.3544391.v1
title: Appendix C. Nonsignificant relationships from statistical models and Kendall's tau correlation tests.

description: Nonsignificant relationships from statistical models and Kendall's tau correlation tests.
DOI: 10.6084/m9.figshare.3544388
title: Appendix D. Modeled probability of occurrence of Amaranthus mitchellii and Eragrostis dielsii, having interactions between cumulative grazing index (CGI) and percentage of silt/clay.

description: Modeled probability of occurrence of Amaranthus mitchellii and Eragrostis dielsii, having interactions between cumulative grazing index (CGI) and percentage of silt/clay.
DOI: 10.6084/m9.figshare.3544388.v1
title: Appendix D. Modeled probability of occurrence of Amaranthus mitchellii and Eragrostis dielsii, having interactions between cumulative grazing index (CGI) and percentage of silt/clay.

description: Modeled probability of occurrence of Amaranthus mitchellii and Eragrostis dielsii, having interactions between cumulative grazing index (CGI) and percentage of silt/clay.
DOI: 10.6084/m9.figshare.3544385
title: Appendix E. Abundance of Swainsona microphylla (present at five sites) in relation to cumulative grazing index (CGI).

description: Abundance of Swainsona microphylla (present at five sites) in relation to cumulative grazing index (CGI).
DOI: 10.6084/m9.figshare.3544385.v1
title: Appendix E. Abundance of Swainsona microphylla (present at five sites) in relation to cumulative grazing index (CGI).

description: Abundance of Swainsona microphylla (present at five sites) in relation to cumulative grazing index (CGI).
DOI: 10.6084/m9.figshare.3544382
title: Appendix A. Charcoal age data by sample location and depth.

description: Charcoal age data by sample location and depth.
DOI: 10.6084/m9.figshare.3544382.v1
title: Appendix A. Charcoal age data by sample location and depth.

description: Charcoal age data by sample location and depth.
DOI: 10.6084/m9.figshare.3544379
title: Appendix A. Formulas and examples for the construction of tail-up and tail-down covariance matrices.

description: Formulas and examples for the construction of tail-up and tail-down covariance matrices.
DOI: 10.6084/m9.figshare.3544376
title: Appendix B. Additional details about the collection and analysis of the EHMP PONSE data set.

description: Additional details about the collection and analysis of the EHMP PONSE data set.
DOI: 10.6084/m9.figshare.3544373
title: Appendix A. Summary of univariate responses of summary community variables to isolation, predator removal, and their interaction.

description: Summary of univariate responses of summary community variables to isolation, predator removal, and their interaction.
DOI: 10.6084/m9.figshare.3544373.v1
title: Appendix A. Summary of univariate responses of summary community variables to isolation, predator removal, and their interaction.

description: Summary of univariate responses of summary community variables to isolation, predator removal, and their interaction.
DOI: 10.6084/m9.figshare.3544370
title: Appendix B. Summary of univariate responses of species compositional variation to isolation, predator removal, and their interaction.

description: Summary of univariate responses of species compositional variation to isolation, predator removal, and their interaction.
DOI: 10.6084/m9.figshare.3544370.v1
title: Appendix B. Summary of univariate responses of species compositional variation to isolation, predator removal, and their interaction.

description: Summary of univariate responses of species compositional variation to isolation, predator removal, and their interaction.
DOI: 10.6084/m9.figshare.3544367
title: Appendix A. Population growth rate (measured in the presence of predators) of populations evolved without predation, with predation, and under low-density conditions.

description: Population growth rate (measured in the presence of predators) of populations evolved without predation, with predation, and under low-density conditions.
DOI: 10.6084/m9.figshare.3544367.v1
title: Appendix A. Population growth rate (measured in the presence of predators) of populations evolved without predation, with predation, and under low-density conditions.

description: Population growth rate (measured in the presence of predators) of populations evolved without predation, with predation, and under low-density conditions.
DOI: 10.6084/m9.figshare.3544364
title: Appendix B. Population growth rate (measured in the absence of predators) of populations evolved without predation and populations evolved with predation by mosquito larvae in six independent experiments.

description: Population growth rate (measured in the absence of predators) of populations evolved without predation and populations evolved with predation by mosquito larvae in six independent experiments.
DOI: 10.6084/m9.figshare.3544364.v1
title: Appendix B. Population growth rate (measured in the absence of predators) of populations evolved without predation and populations evolved with predation by mosquito larvae in six independent experiments.

description: Population growth rate (measured in the absence of predators) of populations evolved without predation and populations evolved with predation by mosquito larvae in six independent experiments.
DOI: 10.6084/m9.figshare.3544355
title: Appendix A. Multivariate-normal likelihood function for replicated sampling.

description: Multivariate-normal likelihood function for replicated sampling.
DOI: 10.6084/m9.figshare.3544355.v1
title: Appendix A. Multivariate-normal likelihood function for replicated sampling.

description: Multivariate-normal likelihood function for replicated sampling.
DOI: 10.6084/m9.figshare.3544352
title: Supplement 1. R program to calculate maximum-likelihood or restricted maximum-likelihood estimates of model parameters, as well as to calculate and plot profile log-likelihoods, for the Gompertz state-space models with replicated sampling.

description: File List Dennis_etal_Gompertz_state_space_model_with_ replicated_sampling.R Description The computer program, in the open-source R language (R Core Development Team. 2006. R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria), uses numerical maximization of a multivariate-normal log-likelihood to compute maximum-likelihood and restricted maximum-likelihood parameter estimates for the Gompertz state-space model of density dependent population growth, for time series abundance data with replicated samples at each observation time. The program also computes and plots profile log-likelihoods for the four model parameters. The data included in the program as an example are the simulated observations appearing in the top panel of Fig. 1 of the main article, and the program was used to produce Fig. 2 in the same paper. Dennis_etal_Gompertz_state_space_model_with_replicated_sampling.R contains annotated code for fitting a stochastic, density-dependent population growth model to time series abundance data in which samples have been replicated at each sampling time.