cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.7m41jd8/3
title: Nestling growth data 2017

description: Detailed nestling growth records with weather conditions in 2017. Nestlings were measured on day 2, 4, 6, 8, 10 and 12. Column headings are as follows: NestlingID=unique ring Canadian Wildlife Service number identifying individual nestlings, NestID=unique code for each nest, HatchSize=number of hatched nestlings, HatchDate=date most of the nestlings hatched (tree swallows typically hatch synchronously) (Julian date), FledgeDate=date the nest fledged (Julian date), FledgeSuccess=0 if this nestling did not fledge, 1 if it did, whyFail=If the nest failed, lists the cause, either “NESTLINGS DIED” if nestlings were found dead in the nest, or “PREDATION” if no nestlings were found, Renest=lists whether nest was a renest or not. All nests used in this analysis were the first nest of the pair, Mass=nestling body mass (g), Tarsus=nestling tarsus length (mm), Wingchord=nestling wing chord (mm), Age=number of days since hatching (e.g., on the hatch date, age=0), MaxTemp3day=mean value of the maximum daily temperatures during the preceding three days (°C), MeanTemp3day=mean value of the mean daily temperatures during the preceding three days (°C), MeanWindspeed3day=Mean value of the mean windspeed (5:30am-8pm) during the preceding three days  (m/s), TotalRainFall3day=total rainfall during the preceding three days (mm), ThermoReg=thermoregulatory strategy employed by nestlings of this age (poikilothermic (0-6 days old), intermediate (7-8 days old), or endothermic (9+ days old))
DOI: 10.5061/dryad.7m41jd8/4
title: Provisioning rate data 2017

description: 2017 provisioning rates for tree swallows with weather data. Column headings as follows: boxID=nest box ID (not unique), ffv=female provisioning rate (feeding visits/hr), mfv=male provisioning rate (feeding visits/hr), NestlingsAlive=The number of nestlings in the nest on the date provisioning rate was measured, Date=Date provisioning rate was measured	 (YYYY-mm-dd), meanwindspeed=mean windspeed from 5:30am-8pm on the day we measured provisioning rate (m/s), MaxTemp=maximum daily temperature on the day we measured provisioning rate	(°C), 
TotalRain_3day=total rainfall in the three days preceding when we measured provisioning rate  (mm), TotalRain_3day2=	“Rain” if it had rained more than 3mm in the preceding days, otherwise “None”
DOI: 10.5061/dryad.7m41jd8/5
title: Long term nestling body size analysis

description: R code for the long term nestling body size analysis
DOI: 10.5061/dryad.7m41jd8/6
title: Long term adult body size analysis

description: R code for the long term adult body size analysis
DOI: 10.5061/dryad.7m41jd8/7
title: Nestling growth analysis 2017

description: R code for the nestling growth analysis in 2017
DOI: 10.5061/dryad.7rm572m/1
title: Data and matlab codes from article

description: 94 files in 10 folders (c. 10MB when unzipped): one README file; two pdfs giving input and output locations for Araneus and Zygiella webs; 40 text files with Araneus web A6 time displacement data for lateral, longitudinal and transverse waves; 49 text files with Zygiella Z6 time displacement data for lateral, longitudinal and transverse waves; two matlab codes for Araneus and Zygiella analysis
DOI: 10.5061/dryad.9mt7743/2
title: RSOS-data availability wangxin
DOI: 10.5061/dryad.df546b8/1
title: PaganiNunezetal2019_NichesAnthropocene_Ecography

description: Five files are available. The two first files contain species' abundances (full and reduced sample) to compute rarefied richness. The third file contains raw individual isotopic data (d13C and d15N). The fourth file contains niche characteristics at the species level. The fifth file is a phylogenetic tree modified to incorporate several populations of the same species.
DOI: 10.5061/dryad.g9n8g17/1
title: Pilot Study_data

description: We conducted a pilot study to assess the effects of varying doses of corticosterone implants on circulating hormone concentrations, and to identify when we would likely observe resulting changes in parasite burden. We tested the ability of subcutaneous hormone implants to elevate baseline corticosterone over three weeks, including sampling time points ~8 h, ~32 h, 7 d, 14 d, and 21 d post-implantation. We piloted three levels of 60-day slow release corticosterone implants (0.1 mg, 0.5 mg, and 1.5 mg corticosterone from Innovative Research of America, Sarasota, FL, USA), and compared their effects to sham-implant and no-implant controls. The data file contains hormone concentrations and other physiological measures taken throughout this pilot study.
DOI: 10.5061/dryad.g9n8g17/2
title: main experiment_data

description: See read me for details.
DOI: 10.5061/dryad.gv7827s/1
title: Data for Ross et al

description: Data collected in the field at Arid Recovery Reserve in 2017. This data concerns bilby emergence time, pen behaviour, burrow use, and survival.
DOI: 10.5061/dryad.hk83497/1
title: Renal imaging data repository

description: Data used to calculate the mean age at initial screening and to make table 1.
DOI: 10.5061/dryad.hp250fb/1
title: Bat Completeness Dataset

description: Bat specimen and species preservation - along with completeness scores calculated for this study.
DOI: 10.5061/dryad.hp250fb/2
title: Bat Completeness Supplementary 1

description: Additional tables and figures to accompany this study
DOI: 10.5061/dryad.jd1kn44/4
title: tree-files

description: All of the main result tree files and the gene tree files used for the ASTRAL and TR2 analyses. Trees in newick or nexus formats.
DOI: 10.5061/dryad.jd1kn44/5
title: dna-matrices-and-analysis-files

description: All concatenated and aligned DNA matrices analyzed for this study. Includes UCE, COI, and BEAST2 matrices. The BEAST2 xml file includes all analysis settings. The package also includes the IQ-Tree partition files for the SWSC-EN-partitioned analysis of the UCE data and the COI data.
DOI: 10.5061/dryad.jd1kn44/6
title: trinity-uce-contigs

description: The bulk set of Trinity v2013-02-25 assemblies in FASTA format for all samples included in this study. Includes all UCE and non-UCE contigs.
DOI: 10.5061/dryad.mm7bj56/1
title: Zytynska et al 2019 JAE_data

description: Data included: plant name and location, ant occurrence data, chemical grouping data (volatiles and metabotypes), and aphid microsatellite data
DOI: 10.5061/dryad.mv2tk97/1
title: FIG 1. Beetle elevation limits and site snow depth

description: This is an Excel file that contains data from Fig 1. Fig 1A data were determined from long-term population surveys in Big Pine Canyon. 1B data was obtained from California's Department of water resources website for the snow logger nearest these sites.
DOI: 10.5061/dryad.mv2tk97/2
title: FIG 2. Beetle abundance by elevation

description: Excel file with 2 tabs. First tab is maximal abundance by site in 2012. Second tab shows statistical output of final analysis.
DOI: 10.5061/dryad.mv2tk97/3
title: FIG 3. Abundance over time during drought

description: Excel file. Tab 1- raw data. Tabs 2 and 3 for conversion to analysis by Permanova. Tab 4 permanova output.
DOI: 10.5061/dryad.mv2tk97/4
title: FIG 4. Fecundity by elevation

description: Excel file. Tab 1 is final data used in figure. Tab 2 is Jmp output. tab 3 is models used to ascertain importance of temperature. Tab 4 is complete raw data with behavior.
DOI: 10.5061/dryad.q6m40r0.1
title: Data from: Phytoplankton species richness along coastal and estuarine salinity continua
DOI: 10.5061/dryad.q6m40r0.1/1.1
title: count table

description: A four column (descriptors) x 478018 rows (records) data table of phytoplankton species specific counts. Column 1: sampleID [character] - unique ID code for each phytoplankton saample; Column 2: name [character] - valid taxonomic latin name of the taxon; Column 3: AphiaID [integer] - WORMS unique ID code for the taxon; Column 4: biomass [numeric] - biomass of the taxon in the particular sample (µg / L). The records are linked with the sample table by the sampleID code, and with the taxon table by the AphiaID code.
DOI: 10.5061/dryad.q6m40r0.1/2.1
title: sample table

description: A 7 columns (descriptors) x 15640 rows (samples) data table, containing the meta data about each phytoplankton sample used in the analysis. Column 1: sampleID - unique sample ID [characters], linking with the sampleID in the count table. Column 1: date [character] - date and year when the sample was taken; Column 3: basin [character] - sample location, either bs (the Baltic Sea) or chesa (the Chesapeake Bay); Column 4: lon [numeric] - longitude coordinate (degrees); Column 5: lat [character] - latitude coordinate (degrees); Column 6: Temp [numeric] - water temperature (°C) of the sample; Column 7: Salin [numeric] - salinity of the sample
DOI: 10.5061/dryad.q6m40r0.1/3.1
title: taxon table

description: 1384 rows (taxa) x  24 columns (descriptors). Column 1: AphiaID [integer] unique ID code for each taxon, linking with the AphiaID of the count table. Column 2: name [character] - name of the taxon, corresponding to the AphiaID in the WORMS database and linking with the name in the count table; Columns 3 - 23 [character] names of the respective taxonomic ranks of the respective taxon; Column 24: rank [character] - the lowest rank of identification of the taxon
DOI: 10.5061/dryad.q6m40r0.2/3.2
title: Taxon table

description: A 24 columns (descriptors) x 1384 rows (taxa), containing the higher ranks of the phytoplankton taxa according to WORMS (http://www.marinespecies.org ). Column 1: AphiaID [integer] unique ID code for each taxon. Column 2: name [character] - name of the taxon, corresponding to the AphiaID in the WORMS database; Columns 3 - 23 [character] names of the respective taxonomic ranks of the taxa; Column 24: rank [character] - the lowest rank of identification of the taxon. The records are linked with the count table by AphiaID and name. UTF-8 text file with LF line endings.
DOI: 10.5061/dryad.qk514d2/1
title: Primate dataset

description: Data on sexual weapons and ornaments, testes size, mating system and social groups of 103 primate species
DOI: 10.5061/dryad.qk514d2/2
title: References

description: Reference associated with the primate dataset
DOI: 10.5061/dryad.rm041kb/1
title: Lab morphology data

description: Data from the laboratory portion of the experiment
DOI: 10.5061/dryad.rm041kb/2
title: Variation in field measurements

description: Coefficients of variation for field data
DOI: 10.5061/dryad.s76h0s6/3
title: README

description: This file contains information related to the "Data" and "R_script" files used for analysis in this study.
DOI: 10.5061/dryad.tt16kr6/1
title: Raw data for figures
DOI: 10.5061/dryad.v870905/1
title: Variability of plant functional traits at Ohrazeni meadow experiment

description: Trait values of plant individuals sampled in eight different treatments of the meadow experiment.
DOI: 10.17632/4b33yt9pkk.1
title: Data for: Normative surface skin temperature changes due to blood redistribution: a prospective study
DOI: 10.5061/dryad.2ck7120/64
title: DNA21_ZFZR.tar

description: Fastq file with raw data of Illumina reads
Plate: DNA21
Marker: ZFZR
Tag combinations to identify the samples from each fastq files are found in the 'CSV file with metadata on fastq files'
DOI: 10.5061/dryad.2ck7120/65
title: DNA22_LFCR.tar

description: Fastq file with raw data of Illumina reads
Plate: DNA22
Marker: LFCR
Tag combinations to identify the samples from each fastq files are found in the 'CSV file with metadata on fastq files'
DOI: 10.5061/dryad.2ck7120/66
title: DNA22_MFZR.tar

description: Fastq file with raw data of Illumina reads
Plate: DNA22
Marker: MFZR
Tag combinations to identify the samples from each fastq files are found in the 'CSV file with metadata on fastq files'
DOI: 10.5061/dryad.2ck7120/67
title: DNA22_ZFZR.tar

description: Fastq file with raw data of Illumina reads
Plate: DNA22
Marker: ZFZR
Tag combinations to identify the samples from each fastq files are found in the 'CSV file with metadata on fastq files'
DOI: 10.5061/dryad.2ck7120/68
title: DNA23_LFCR.tar

description: Fastq file with raw data of Illumina reads
Plate: DNA23
Marker: LFCR
Tag combinations to identify the samples from each fastq files are found in the 'CSV file with metadata on fastq files'
DOI: 10.5061/dryad.2ck7120/69
title: DNA23_MFZR.tar

description: Fastq file with raw data of Illumina reads
Plate: DNA23
Marker: MFZR
Tag combinations to identify the samples from each fastq files are found in the 'CSV file with metadata on fastq files'
DOI: 10.5061/dryad.2ck7120/70
title: DNA23_ZFZR.tar

description: Fastq file with raw data of Illumina reads
Plate: DNA23
Marker: ZFZR
Tag combinations to identify the samples from each fastq files are found in the 'CSV file with metadata on fastq files'
DOI: 10.5061/dryad.2ck7120/71
title: DNA24_LFCR.tar

description: Fastq file with raw data of Illumina reads
Plate: DNA24
Marker: LFCR
Tag combinations to identify the samples from each fastq files are found in the 'CSV file with metadata on fastq files'
DOI: 10.5061/dryad.2ck7120/72
title: DNA24_MFZR.tar

description: Fastq file with raw data of Illumina reads
Plate: DNA24
Marker: MFZR
Tag combinations to identify the samples from each fastq files are found in the 'CSV file with metadata on fastq files'
DOI: 10.5061/dryad.3472nk1/1
title: Presence Points

description: This folder contains two occurrence point datasets, First approach_Presence Points.xlsx and Second Approach_Presence Points.xlsx, used for ENM analyses.
DOI: 10.5061/dryad.3472nk1/2
title: E_space

description: This folder contains R scripts used for ENM E_space analyses for this study.
DOI: 10.5061/dryad.3472nk1/3
title: MMRR

description: This folder contains the data and script used for MMRR tests for this study.
DOI: 10.5061/dryad.3k5c0sh/12
title: JA14785_pool1_CGTACG_L004_R1 raw reads
DOI: 10.5061/dryad.3k5c0sh/13
title: JA14785_pool1_CGTACG_L004_R2 raw reads
DOI: 10.5061/dryad.3k5c0sh/14
title: JA14785_pool2_ATTGGG_L003_R1 raw reads
DOI: 10.5061/dryad.3k5c0sh/15
title: JA14785_pool2_ATTGGG_L003_R2 raw reads
DOI: 10.5061/dryad.3k5c0sh/16
title: JA14785_pool2_ATTGGG_L004_R1 raw reads
DOI: 10.5061/dryad.3k5c0sh/17
title: JA14785_pool2_ATTGGG_L004_R2 raw reads
DOI: 10.5061/dryad.3k5c0sh/18
title: JA14785_pool3_GTATTA_L003_R1 raw reads
DOI: 10.5061/dryad.3k5c0sh/19
title: JA14785_pool3_GTATTA_L003_R2 raw reads
DOI: 10.5061/dryad.3k5c0sh/21
title: JA14785_pool3_GTATTA_L004_R2 raw reads
DOI: 10.5061/dryad.3p3v816/1
title: bat_references

description: References to publications yielding data on the distribution, abundance, feeding ecology, and body mass of New World bat species.
DOI: 10.5061/dryad.3p3v816/2
title: bat_register

description: A list of presences of New World bats within ecological samples. Each record is associated with a count of individuals.
DOI: 10.5061/dryad.3p3v816/3
title: bat_samples

description: A list of ecological samples yielding New World bats presences. Each record is associated with geographic coordinates and climate data sourced from primary literature.
DOI: 10.5061/dryad.3p3v816/4
title: bat_species

description: A list of New World bat species. Each record is associated with feeding ecology and body mass data.
DOI: 10.5061/dryad.412jp56/1
title: Data for Table A1, silk removal in a natural context

description: These data show the presence or absence of factors associated with 29 spider webs found on Veromessor pergandei foraging columns and nest mounds. For each variable, 0 = no, 1 = yes. The statistical analysis of this data set is presented in Table A1.
DOI: 10.5061/dryad.412jp56/2
title: Data for Table A2, Silk-gland-dummy assay

description: Data represent the number of workers responding to 5 different stimuli, across 16 field colonies. The statistical analysis of this data set is presented in Table A2.
DOI: 10.5061/dryad.412jp56/3
title: Data for Wilcoxon ranked sign test, head vs gaster gland assay,

description: Data represent worker responses to each of 3 stimuli, presented to 30 unique colonies. Paired responses to head and gaster contents were compared with a Wilcoxon ranked sign test for 28/30 unique pairs.
DOI: 10.5061/dryad.4nn33b2.1/1.1
title: Dataset

description: Raw data including location of the plots (longitude, latitude and type of forest), forest structural features (stem density, basal area and canopy height) climatic variables (potential evapotranspiration, mean annual precipitation, mean annual temperature), human footprint index and cyclone regime variables (cyclone frequency and power dissipation index).
DOI: 10.5061/dryad.524cv34/1
title: Site Information & Community Abundances

description: This spreadsheet contains the raw, stratified data we used in our analyses. The following lists the data contained in each sheet (1-4): 1) site information, 2) bird abundances, 3) plant percentage cover, 4) aquatic macroinvertebrate abundances.
DOI: 10.5061/dryad.72048tr/1
title: Arthropod count data and analysis programs

description: See README.docx
DOI: 10.5061/dryad.72gm17m/1
title: Trait and relative abundance data on Lake Tanganyikan cichlids observed at the micro-habitat scale

description: Data includes scientific names and trait data compiled for Lake Tanganyikan cichlids observed near a school of juvenile clupeids near Kigoma, Tanzania.
DOI: 10.5061/dryad.7m41jd8/8
title: Provisioning rate analysis 2017

description: R code for the provisioning rate analysis in 2017
DOI: 10.5061/dryad.8735575/1
title: Nitrogen addition reduced ecosystem stability regardless of its impacts on plant diversity

description: This data file contains plot-level data, including nitrogen (ambient nitrogen, nitrogen addition) and litter treatments (litter removal, initial litter, litter addition), and variables ecosystem stability, dominant species stability, subordinate species stability, species richness, dominance ratio index, species asynchrony and ANPP (g m-2), for the periods 2010-2013, 2014-2016 and 2010-2016.
DOI: 10.5061/dryad.8b9j040/1
title: Suppdata1_G_fossarum_bodyweights

description: Body weights of Gammarus fossarum individuals used in the experiment
DOI: 10.5061/dryad.8b9j040/2
title: Suppdata2_GF_weight_and_survival

description: Leaf consumption rates by Gammarus fossarum individuals, and their survival, over a roughly two-week experiment
DOI: 10.5061/dryad.8b9j040/3
title: Suppdata4_D_villosus_bodyweights

description: Body weights of Dikerogammarus villosus individuals used in the experiment
DOI: 10.5061/dryad.8kt4675/1
title: Foraging mode and prey size in snakes

description: The data were collected in the field and by dissection of museum specimens. The data are stored in an excel file and the abbreviations means: Prop for proportion, RPM for relative prey mass, and Ba is an index of the dietary breadth of a species
DOI: 10.5061/dryad.8sk41pc/1
title: Fruit & flower abundance data and dietary items collected from bats

description: Data includes Frequency of occurrence of dietary items collected from trapped bats and from ejecta/faecal samples collected unnder day roost. Data also includes fruit and flower abundance (mean per tree) for monitored trees
DOI: 10.5061/dryad.9582536/1
title: BarkerEtal-2019_JAE_modelData

description: Data to support analysis of the relationship between external factors and the likelihood of an elk migrating, remaining resident, or exhibiting behaviors that were intermediate between migration and residency. Behav = type of migratory behavior (“other” denotes intermediate behavior). Dens = an index of conspecific density on the winter range (approximate number of animals in the herd divided by the area of the herd winter range).  deltaFor = difference in the forage (measured as maximum NDVI) available outside vs. inside an individual’s winter range during summer. Herd = elk herd in which the individual spent the winter at the beginning of the year studied.  YOI = year during which data were collected for the individual.  densOwn = intensity of human use on the individual’s winter range (measured as density of land ownership, i.e., number of unique landowners on the individual’s winter range divided by the area of the individual’s winter range).  irrig = binary covariate to represent whether (1) or not (0) the individual had access to irrigated agriculture on its winter range.  predFor = how predictably forage varied across the landscape over the previous six years, including the year during which the individual was studied (measured as the negative six-year standard deviation of NDVI amplitude).
DOI: 10.5061/dryad.9p7t664/1
title: Raw database

description: Concentrations of the five NNIs in soil, plant and organic seeds samples and associated location (GPS), slope, watershed and date of sampling.
DOI: 10.5061/dryad.9p7t664/2
title: R code

description: R script for all the analyses conducted in this study.
DOI: 10.5061/dryad.b32pf80/1
title: Data_GrowthRingAnalysis

description: This file contains data on plant age, stem anatomical traits and shoot biomass of Plantago lanceolata collected in a grassland biodiversity experiment (Jena Experiment) in plant communities of different species richness.
DOI: 10.5061/dryad.b32pf80/2
title: Data_Seedlings

description: This file contains data on seedling numbers of Plantago lanceolata counted in plots of a grassland biodiversity experiment (Jena Experiment), where this species belongs to the sown species combinations.
DOI: 10.5061/dryad.bb48rf0/1
title: Bottlenose Dolphin Detections

description: Time series of passive acoustic detections of bottlenose dolphins at four sites. Column abbreviations: MinutesBetwOcc=Minutes between dolphin occurrence, EncNumber=Encounter number, lnlCIus=natural logarithm of inter-click interval in microseconds, Foraging=feeding buzz detected during that minute as True or False.
DOI: 10.5061/dryad.bb48rf0/2
title: Common Dolphin Detections

description: Time series of passive acoustic detections of common dolphins at two sites. Column abbreviations: MinutesBetwOcc=Minutes between dolphin occurrence, EncNumber=Encounter number, lnlCIus=natural logarithm of inter-click interval in microseconds, Foraging=feeding buzz detected during that minute as True or False.
DOI: 10.5061/dryad.c06p34h/1
title: Jury and Toonen. Proc B. Gnet

description: Calcification rates over 3 months for each coral examined in this study. Columns show aquarium number (Tank), target temperature treatment (LT = low temperature, MT = medium temperature, HT = high temperature), target pH treatment (HpH = high pH, MpH = medium pH, LpH = low pH), collection site (KB = Kane'ohe Bay, WB = Waimanalo Bay), species (P. acu = Pocillopora acuta, M. cap = Montipora capitata, P. com = Porites compressa), and calcification rate when normalized to initial weight (Gnet.wt in mg/g/d) or to estimated surface area (Gnet.SA in ug/cm2/d). Corals which experienced partial mortality or died were dropped from the analysis (shown as NA).
DOI: 10.5061/dryad.c06p34h/2
title: Jury and Toonen. Proc B. Survivorship

description: Coral survivorship after 3 months of exposure to the treatments. Columns show target temperature treatment (LT = low temperature, MT = medium temperature, HT = high temperature), target pH treatment (HpH = high pH, MpH = medium pH, LpH = low pH), collection site (KB = Kane'ohe Bay, WB = Waimanalo Bay), species (P. acu = Pocillopora acuta, M. cap = Montipora capitata, P. com = Porites compressa), and the number of corals of each treatment which fell into each of the survivorship categories (Alive = &lt;5% tissue loss, Partial mortality = 30-90% tissue loss, Dead = no discernible live tissue).
DOI: 10.5061/dryad.c06p34h/3
title: Jury and Toonen. Proc B. pH.mean

description: Daily average pH values obtained from morning (pH.min) and evening (pH.max) pH measurements over the course of the experiment. Columns correspond to each aquarium in the experiment with tank number and target temperature and pH conditions as indicated.