cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17028/rd.lboro.7462064.v1
title: Supplementary information files for article: 'Simple and ultrafast resonance frequency and dissipation shift measurements using a fixed frequency drive'

description: Supplementary information files for article: 'Simple and ultrafast resonance frequency and dissipation shift measurements using a fixed frequency drive'. A new method for determination of resonance frequency and dissipation of a mechanical oscillator is presented. Analytical expressions derived using the Butterworth-Van Dyke equivalent electrical circuit allow the determination of resonance frequency and dissipation directly from each impedance datapoint acquired at a fixed amplitude and frequency of drive, with no need for numerical fitting or measurement dead time unlike the conventional impedance or ring-down analysis methods. This enables an ultrahigh time resolution and superior noise performance with relatively simple instrumentation. Quantitative validations were carried out successfully against the impedance analysis method for inertial and viscous loading experiments on a 14.3 MHz quartz crystal resonator (QCR). Resonance frequency shifts associated with the transient processes of quick needle touches on a thiol self-assembled-monolayer functionalised QCR in liquid were measured with a time resolution of 112 μs, which is nearly two orders of magnitude better than the fastest reported quartz crystal microbalance. This simple and fast fixed frequency drive (FFD) based method for determination of resonance frequency and dissipation is potentially more easily multiplexable and implementable on a single silicon chip delivering economies of scale.
DOI: 10.6084/m9.figshare.3562911.v1
title: Appendix A. Example publications with flawed use of model-averaged regression coefficients.

description: Example publications with flawed use of model-averaged regression coefficients.
DOI: 10.6084/m9.figshare.23812290.v1
title: Algorithm DPF and dataset.rar

description: A wrapper method solving feature selection problem
DOI: 10.6084/m9.figshare.28810730.v1
title: Coding Sheet Key (1).docx

description: Raw data
DOI: 10.60893/figshare.ajp.27919521.v1
title: Supplement Number 1

description: A csv fild containing the radial magnetic field vs. height data.
DOI: 10.6084/m9.figshare.27325734.v1
title: 3-Cluster Outcome

description: Pass Eventing - Cluster Outcome
DOI: 10.6084/m9.figshare.25577178.v1
title: VEME 2024 NGS Module Data

description: Data for the VEME 2024 NGS module.
DOI: 10.6084/m9.figshare.28805981.v1
title: Supplementary data 3

description: Tables present the data and graph of oxygen consumption of seal lice at two temperatures in air and in water.<br>
DOI: 10.6084/m9.figshare.918611.v1
title: Open Access Articles in Web of Science

description: Total number of articles and reviews by year indexed in Web of Science and number of articles and reviews in journals flagged as Open Access in Web of Science This only includes articles publishing in full OA journals, so will not include green OA articles nor open access articles published in hybrid journals
DOI: 10.6084/m9.figshare.23664765.v1
title: RNA data.count

description: RNA- sequencing data of esophageal cancer patients treated with afatinib.
DOI: 10.6084/m9.figshare.21136906.v1
title: Subtype-specific expression derived from clustering

description: This file contains subtype-specific expression derived from NMF clustering results.
DOI: 10.15482/usda.adc/28370015.v1
title: Data and Supplemental Figures from: Effect of pH adjustments on a novel micellar casein-based edible 3D printing formulation

description: Three-dimensional (3D) food printing holds the potential to help reduce food waste by precise portion control and use of materials that are produced in excess or are otherwise discarded. This relatively new technology is likely to undergo decreases in equipment costs. To take advantage of such prospects, we developed a novel micellar casein–based edible 3D printing formulation. Our formulation relies on a highly concentrated micellar casein solution (27.75%, wt/wt, final) along with pH adjustments (3.5, 4.0, 4.8, 6.7, 7.2, and 8.2) at chilled temperature (4-9°C) to avoid premature aggregation. In comparison to the natural pH of 6.7, both alkalinization and acidification past the isoelectric point of 4.6 enhanced both elastic and viscous moduli that enable for shape retention during and after extrusion from a 3D food printer. However, alkalinization led to smaller increases in the viscous modulus and did not lead to the shape retention that acidification to 4.0 or 3.5 does. Both acidification and alkalinization also resulted in rougher surface textures compared with the formulation at pH 6.7. Whereas the pH 4.8 formulation had inferior shape retention qualities compared with those at the other pH values tested, it had optimized water resilience, defined here as minimized swelling and dissolution of dried structures placed in water. Overall, we present a novel casein-based 3D printing formulation that could be printed while chilled, and with properties that could be modified by pH adjustments.
DOI: 10.6084/m9.figshare.13637984.v1
title: Additional Supporting Materials for Zhou et al 2021 Gerontology

description: <b>Background:</b> The genetic locus 3p21.31 has been associated with severe coronavirus disease 2019 (COVID-19), but the underlying pathophysiological mechanism is unknown. <b>Methods:</b> To identify intermediate traits associated with the 3p21.31 locus, we first performed a phenome-wide association study (PheWAS) with 923 phenotypes in 310,999 European individuals from the UK Biobank. For genes potentially regulated by the COVID-19 risk variant, we examined associations between their expression and the polygenic score (PGS) of 1,263 complex traits in a meta-analysis of 31,684 blood samples. For the prioritized blood cell traits, we tested their associations with age and sex in the same UK Biobank sample. <b>Results:</b> Our PheWAS highlighted multiple blood cell traits to be associated with the COVID-19 risk variant, including monocyte count and percentage (<i>p</i> = 1.07x10<sup>-8</sup><i>,</i> 4.09x10<sup>-13</sup>), eosinophil count and percentage (<i>p</i> = 5.73x10<sup>-3</sup>, 2.20x10<sup>-3</sup>), and neutrophil percentage (<i>p</i> = 3.23x10<sup>-3</sup>). The PGS analysis revealed positive associations between the expression of candidate genes and genetically predicted counts of specific blood cells: <i>CCR3</i> with eosinophil and basophil (<i>p</i> = 5.73x10<sup>-21</sup>, 5.08x10<sup>-19</sup>); <i>CCR2</i> with monocytes (<i>p</i> = 2.40x10<sup>-10</sup>); and <i>CCR1</i> with monocytes and neutrophil (<i>p</i> = 1.78x10<sup>-6</sup>, 7.17x10<sup>-5</sup>). Additionally, we found that almost all examined white blood cell traits are significantly different across age and sex groups. <b>Conclusions:</b> Our findings suggest that altered blood cell traits, especially those of monocyte, eosinophil, and neutrophil, may represent the mechanistic links between the genetic locus 3p21.31 and severe COVID-19. They may also underlie the increased risk of severe COVID-19 in older adults and men.
DOI: 10.6084/m9.figshare.28387874.v1
title: Experimental data (2025.02)

description: Experimental data used in this paper.
DOI: 10.6084/m9.figshare.23092127.v1
title: Supplementary R code for "Palaeoenvironmental data track Late Quaternary anthropogenic impacts on vegetation and landscapes in Mzimba, northern Malawi" (submitted to <em>Frontiers in Environmental Archaeology</em>, June 2023).

description: These are data files and R code for stable isotope results, depositional models and pollen spectra generated from the Mzimba region of north-central Malawi. 
<br>
Authors: David K. Wright, Sarah J. Ivory, Jago J. Birk, Jeong-Heon Choi, Benjamin Davies, Sabine Fiedler, Jacob Davis, Potiphar Kaliba, Jessica C. Thompson
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DOI: 10.6084/m9.figshare.24763791.v1
title: Algal short-term greenhouse effect

description: In eutrophic lakes, the proliferating algae sequester atmospheric carbon dioxide (CO<sub>2</sub>) and store it in the form of biomass organic carbon (OC). The high biodegradability of this endogenous OC, however, can generate anaerobic conditions and facilitate methane (CH<sub>4</sub>) production. This process of sequestered CO<sub>2</sub> to higher radiative forcing CH<sub>4</sub> has the potential to add CO<sub>2</sub>-equivalents (CO<sub>2</sub>-eq) to the atmosphere. This study conducted the first analysis of carbon budgets associated with algae in eutrophic lakes from a life cycle perspective and predicted the impact of future climate warming and nutrient reduction on this effect using machine learning.
DOI: 10.6084/m9.figshare.5008280.v5
title: Aerosol optical depth datasets over 400 AERONET sites

description: MODIS, MERRA, and <i>in-situ</i> AOD data extracted from 400 AERONET sites during 2002-2015. The data here are from MODIS C6.1, AERONET version 3.0, and the old version (MODIS C6 and AERONET version 2.0) is not used anymore.<br>Please cite the following paper and the datasets if you use them.<br><br> Shi, H., Xiao, Z., Zhan, X., Ma, H., Tian, X., 2019. Evaluation of MODIS and two reanalysis aerosol optical depth products over AERONET sites. Atmos. Res. 220, 75–80. https://doi.org/10.1016/j.atmosres.2019.01.009<br>Shi, H., Xiao, Z., 2017. Aerosol optical depth datasets over 400 AERONET sites.https://doi.org/10.6084/m9.figshare.5008280<br><br><br><br><br>
DOI: 10.6084/m9.figshare.24717861.v2
title: Questionnaire for Finnish medical students on Palliative Care

description: Background: Most studies on palliative medicine (PM) undergraduate education have focused on contents and organizational issues but not outcome. Students’ learning outcomes should be studied to improve teaching in medical schools.Methods: A questionnaire about perceived PM education and attitudes on palliative care (PC) was sent to 543 last year students in all five Finnish medical schools in 2018-2019. 175 (32 %) responses were received from four universities. The students evaluated both the quantity and quality of their PM teaching, implementation of European Association for Palliative Care (EAPC) guidelines and their satisfaction to the training. There were two palliative case scenarios, and the students were asked to find the best treatment option.Results: In the Finnish universities PM education was available mainly integrated with oncology, geriatrics, and general medicine. Two universities also offered a specific PM course. In average, 50-70% of the EAPC curriculum was covered by lectures, small-group teaching, seminars, and bedside teaching with significant differences between faculties. Only 30-60 % of students were satisfied with the education received. The highest rankings were given in the universities with a special PM course.Conclusions: In Finland, the coverage of EAPC curriculum is satisfactory, but the PM education is mainly given integrated with other specialties. The dedicated course on PM was associated with increased perceived knowledge and satisfaction of PM education. However, PM training was not associated with students’ attitudes on PC.
DOI: 10.6084/m9.figshare.21828126.v1
title: Supplementary Material for: Late PAMM-Like Lesions in a Patient with HIV Retinopathy

description: This report describes a case of a newly diagnosed 49-year-old HIV patient, who presented with decreased visual acuity and retinal lesions characterized by ischemia at the level of the deep retinal capillary plexus, documented with optical coherence tomography (OCT), OCT angiography, fluorescein angiography, and visual fields testing. These lesions closely resembled the morphologic and clinical characteristics of late paracentral acute middle maculopathy. The presence of these lesions suggests that HIV microangiopathy can potentially affect both superficial and deep retinal capillary plexuses.
DOI: 10.6084/m9.figshare.23614113.v1
title: Raw Data.xlsx

description: Raw data for “Denitrification and anammox separately dominate microbial nitrogen loss in the rhizosphere and bulk soils of riparian areas along a latitudinal gradient”
DOI: 10.6084/m9.figshare.14167643.v1
title: Dataset students entrepreneurial intentions (csv).csv

description: This dataset contain information about students' entrepreneurial intentions (Indonesian sample)
DOI: 10.6084/m9.figshare.3560013.v1
title: Appendix D. Supplementary information containing detailed Heliconia tortuosa habitat model methods.

description: Supplementary information containing detailed Heliconia tortuosa habitat model methods.
DOI: 10.6084/m9.figshare.28106393.v1
title: DATA.xls

description: 作为人机交互的重要工具，AI）已成为个人日常生活中不可或缺的一部分。但是，在目前的使用中仍然存在一系列由侵犯隐私引起的问题。本研究旨在探讨用户在使用 AI 语音助手时因隐私问题而产生的风险感知和创新阻力。
DOI: 10.6084/m9.figshare.10277810.v1
title: Cell line feature sets used in Corsello et al., 2020

description: The cancer cell line characteristics used in the biomarker analysis presented in Corsello et al., 2020 (doi.org/10.1101/730119). <br>Please see Supplementary Table 9 for the original sources of each dataset and the complete output of the analysis is available at https://depmap.org/repurposing/. <br>For updated versions of the datasets, we refer the user to the depmap.org.
DOI: 10.6084/m9.figshare.24316948.v3
title: Dataset: Investigation into the causes and potential mitigation of the high incidence of farmers' suicide

description: This study addresses the pressing issue of farmer suicides in India, a problem that has escalated significantly since 1995, with over 0.3 million recorded cases. While scholars and activists have proposed various factors contributing to these suicides, quantitative insights into the influence and probabilistic significance of these factors remain elusive. <br>The dataset comprises ``Research Articles on Farmer Suicides in India''. A total of 150 articles were downloaded from Google Scholar and PubMed, utilising the search keyword ``Farmer Suicides in India''. Subsequently, meticulous scrutiny led to the selection of 87 PDF articles. The collected documents underwent conversion from .pdf to .txt format. Each PDF document was accessed via Foxit PDF reader software and then saved in .txt format. The aggregation of these 87 and manually collected causal sentences files constitutes the dataset for this study.Our analysis reveals that health-related causal factors account for over 50% of farmer suicides, while economic, social, and socio-economic factors contribute to 26%. By meticulously investigating these causal elements, our approach has the potential to substantially mitigate future instances of farmer suicides.
DOI: 10.6084/m9.figshare.28846286.v1
title: 222 new.xlsx

description: This data covers the period 2000-2020. And then, there are 1134 observations in this empirical data, which including 54 countries all over the world. Finally, this paper’s empirical data originates from investing.com and Federal Reserve Economic Data (FRED) and Organization for Economic Cooperation and Development (OECD) data and World Bank Data and International Monetary Fund (IMF) Data.
DOI: 10.6084/m9.figshare.16553139.v1
title: Supplementary Material for: Natural History of Allergy to Hen’s Egg: A Prospective Study in Children Aged 6 to 12 Years

description: <b><i>Introduction:</i></b> There are limited reports on the natural history of hen’s egg (HE) allergy (HEA) in children &lt;6 years. We aimed to investigate the natural history of HEA in children aged 6–12 years and the factors affecting its tolerance acquisition. <b><i>Methods:</i></b> Using the database in our hospital, a total of 137 patients diagnosed with a definitive immediate-type reaction to HE when they turned 6 years were enrolled, and the natural course of HEA was prospectively examined until patients turned 12 years. Tolerance was defined as being able to pass an oral food challenge to consume a half or whole heated HE or consume heated HE freely without symptoms. Thirty patients (21.9%) who were enrolled for oral immunotherapy and 21 (15.3%) who discontinued follow-up were considered dropouts. Kaplan-Meier estimation was used to evaluate the rate of tolerance. <b><i>Results:</i></b> Fifty-five of the 137 patients (40.1%) had a previous HE anaphylaxis history; 61 (44.5%) patients had acquired tolerance to HE by age 12 years; and 25 (18.2%) continued total or partial HE elimination. The estimated acquired tolerance rates by ages 7, 9, and 12 years were 14.6%, 40.8%, and 60.5%, respectively. A previous history of HE anaphylaxis before 6 years of age, reacting to small amounts of heated HE by 6 years of age, and higher ovomucoid-specific immunoglobulin E values at the same age were associated with persistent HEA. <b><i>Conclusion:</i></b> This study provides important insights into the natural course of HEA beyond early childhood, with the acquisition of HE tolerance continuing throughout the duration of the study.
DOI: 10.6084/m9.figshare.19137074.v1
title: Supplementary Material for: Left Ventricular Wall Reconstruction with Autologous Vascularized Gastric Graft in a Porcine Pilot Model

description: Introduction: Surgical replacement of dysfunctional cardiac muscle with regenerative tissue is an important option to combat heart failure. But current available myocardial prostheses like a Dacron or a pericardium patch neither have a regenerative capacity nor do they actively contribute to the heart`s pump function. This study aimed to show the feasibility of utilizing a vascularized stomach patch for transmural left ventricular wall reconstruction. Methods: A left ventricular transmural myocardial defect was reconstructed by performing transdiaphragmatic autologous transplantation of a vascularized stomach segment in six Lewe minipigs. Three further animals received a conventional Dacron patch as a control treatment. The first three animals were followed up for 3 months until planned euthanasia, whereas the observation period for the remaining three animals was scheduled 6 months following surgery. Functional assessment of the grafts was carried out via cardiac magnetic resonance tomography (MRI) and angiography. Physiological remodeling was evaluated histologically and immunohistochemically after heart explanation. Results: Five out of six test animals and all control animals survived the complex surgery and completed the follow-up without clinical complications. One animal died intraoperatively due to excessive bleeding. No animal experienced a rupture of the stomach graft. Functional integration of the heterotopically transplanted stomach into the surrounding myocardium was observed. Angiography showed the development of connections between the gastric graft vasculature and the coronary system of the host cardiac tissue. Conclusions: The clinical results and the observed physiological integration of gastric grafts into the cardiac structure demonstrate the feasibility of vascularized stomach tissue as a myocardial prosthesis. The physiological remodeling indicates a regenerative potential of the graft. Above all, the connection of the gastric vessels with the coronary system constitutes a rationale for the use of vascularized and therefore viable stomach tissue for versatile tissue engineering applications.
DOI: 10.6084/m9.figshare.23674614.v2
title: Developing potential drugs for <em>insomnia</em> through computational analysis

description: This data contains docking scores, receptor - ligand interaction(jpeg), Pharmacokinetic and toxicological profiles of compounds related to zolpidem, Suvorexant, Ramelteone and Triazolam.
DOI: 10.6084/m9.figshare.28415918.v1
title: Datafile1_simulation_information_training_set.csv

description: Glass label, composition, simulation cell information and β1.0 of training set (NBP, KBP and AKP systems)
DOI: 10.6084/m9.figshare.21992264.v1
title: ct-uroliths-freiburg

description: Data related to the Publication "<strong>Effect of surface-partial-volume correction and adaptive threshold on segmentation of uroliths in computed tomography"</strong> <br> 101 Uroliths were ex-vivo (volume and diameter) and CT imaging was performed. Data consists of - measured ground truth volume - measured ground truth diameter - CT imaging of all stones - stone composition (when available) <br> <br> Data ist provided as a csv table, and as MATLAB .mat file. <br> <strong>CSV Table Data</strong> Table containing a row for each of the 101 uroliths with colums: ID, Volume, Diameter and Stone Type. <br> <strong>Matlab Data</strong> Matlab structure array of the 101 uroliths with the following fields: <br> gt_diam: diameter (ground truth) gt_vol: volume (ground truth) <em><strong> </strong></em> imgdata 3D data from CT imaging voxsiz voxel size in mm (x y z) voxvol_mL size per voxel in milliliter <br> Some uroliths have cavities, these are filled with NaN values in imgdata <br>
DOI: 10.6084/m9.figshare.12102795.v1
title: TCGA full RNA-seq matrix

description: Data frame containing RNA-seq data for all TCGA samples<br>
DOI: 10.6084/m9.figshare.14407028.v1
title: Supplementary Material for: Real-World Experience with Artificial Intelligence-Based Triage in Transferred Large Vessel Occlusion Stroke Patients

description: <b><i>Background and Purpose:</i></b> Randomized controlled trials have demonstrated the importance of time to endovascular therapy (EVT) in clinical outcomes in large vessel occlusion (LVO) acute ischemic stroke. Delays to treatment are particularly prevalent when patients require a transfer from hospitals without EVT capability onsite. A computer-aided triage system, Viz LVO, has the potential to streamline workflows. This platform includes an image viewer, a communication system, and an artificial intelligence (AI) algorithm that automatically identifies suspected LVO strokes on CTA imaging and rapidly triggers alerts. We hypothesize that the Viz application will decrease time-to-treatment, leading to improved clinical outcomes. <b><i>Methods:</i></b> A retrospective analysis of a prospectively maintained database was assessed for patients who presented to a stroke center currently utilizing Viz LVO and underwent EVT following transfer for LVO stroke between July 2018 and March 2020. Time intervals and clinical outcomes were compared for 55 patients divided into pre- and post-Viz cohorts. <b><i>Results:</i></b> The median initial door-to-neuroendovascular team (NT) notification time interval was significantly faster (25.0 min [IQR = 12.0] vs. 40.0 min [IQR = 61.0]; <i>p</i> = 0.01) with less variation (<i>p</i> &lt; 0.05) following Viz LVO implementation. The median initial door-to-skin puncture time interval was 25 min shorter in the post-Viz cohort, although this was not statistically significant (<i>p</i> = 0.15). <b><i>Conclusions:</i></b> Preliminary results have shown that Viz LVO implementation is associated with earlier, more consistent NT notification times. This application can serve as an early warning system and a failsafe to ensure that no LVO is left behind.