cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12647144.v5
title: Immigrant Mothers and Children Study

description: Researchers interested in using the data included in this set for novel analyses must contact the PI before use at eholdsworth@albany.edu or eaholdsworth5@gmail.com<br>Full study variables and methodology included in data dictionary.<br>2018-2019. Demographics, pregnancy info, breastfeeding, Perceived Stress, Multidimensional Social Support, Everyday Discrimination, Edinburgh Postnatal Depression, Social Network, ACES. Mothers born in another country or Puerto Rico, with child 4-24 months old, &gt;18 years old, English/Spanish-speaking. <br> Semi-structured interviews on stressors, support, life in US, children. Transcripts available upon request. Hair samples for cortisol concentration analysis. Child saliva samples for methylation of NR3C1 sites.<br> Interviews of local organizations to identify local resources for immigrant women. Field notes from these interviews and social events provided upon request.
DOI: 10.25505/fiz.icsd.cc27v52c
title: CSD 2080722: Experimental Crystal Structure Determination

description: Related Article: Christopher M Collins, Luke M Daniels, Quinn Gibson, Michael W Gaultois, Michael Moran, Richard Feetham, Michael J Pitcher, Matthew S Dyer, Charlene Delacotte, Marco Zanella, Claire A Murray, Gyorgyi Glodan, Olivier Perez, Denis Pelloquin, Troy D Manning, Jonathan Alaria, George R Darling, John B Claridge, Matthew J. Rosseinsky|2021|Angew.Chem.,Int.Ed.|60|16457|doi:10.1002/anie.202102073
DOI: 10.18119/n9n59t
title: Network of merged WikiPathways WP5083 and WP5090
DOI: 10.6084/m9.figshare.14955189.v2
title: Frontoparietal network resilience is associated with protection against cognitive decline in Parkinson’s disease

description: Please see manuscript for details.
DOI: 10.18119/n9hg7x
title: Network of developmental gene ontology biological processes
DOI: 10.6084/m9.figshare.3761562.v1917
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.18119/n9cp50
title: Network of approved drugs for genes included in WP5083
DOI: 10.25345/c5883w
title: MassIVE MSV000087802 - Set of Amazonian fungal strains part 4
title: A set os LCMS runs (micrOTOF II) with fungal extracts from different places of the Amazon
DOI: 10.3886/e144904v1
title: Census Tree Links

description: The data sets in this repository allow users to link people among the U.S. decennial censuses, using the "histid" identifier. The census data sets users will need are indexed by Ancestry.com and are hosted by IPUMS at https://usa.ipums.org/usa-action/samples. Users will need to download the full-count census for each year and be sure to select the "histid" variable that is available under the Person/Historical Technical drop-down menu.<br><br>As of 7/12/21, links are available between the 1900-1910, 1910-1920, and 1900-1920 censuses.<br><br>A detailed account of how these links are created and a description of the data and its characteristics are available in the following article:<br><br><b>Price, J., Buckles, K., Van Leeuwen, J., & Riley, I. (2021). Combining family history and machine learning to link historical records: The Census Tree data set. </b><b>Explorations in Economic History</b><b>, </b><b>80</b><b>, 101391.</b><br>https://www.sciencedirect.com/science/article/pii/S0014498321000024<br>
DOI: 10.18119/n9801n
title: Network of approved drugs for genes included in WP5090
DOI: 10.18119/n94603
title: Network with interactions between DEGs, ChEMBL compounds, and Drugbank drugs
DOI: 10.3886/e130961
title: Data and code from Price, Buckles, Van Leeuwen, & Riley (Explorations in Economic History)

description: <b>NOTE: Be sure you are using the most recent version of this repository.</b><br><br>These files include data and code used to create tables and figures for "Combining Family History and Machine Learning to Link Historical Records: The Census Tree Data Set" (citation below). We have included the truth set that we use to train our model along with the machine learning code we use to link records using this truth set. Our truth set includes histid pairs between the different census records, which can be combined with the restricted versions of the full-count census records that are distributed through the University of Minnesota.<br><br>For more details, see the "Read Me" file and the published paper at:<br><br>Price, J., Buckles, K., Van Leeuwen, J., & Riley, I. (2021). Combining family history and machine learning to link historical records: The Census Tree data set. Explorations in Economic History, 80, 101391.<br>https://www.sciencedirect.com/science/article/pii/S0014498321000024<br>
DOI: 10.3886/e130961v6
title: Data and code from Price, Buckles, Van Leeuwen, & Riley (Explorations in Economic History)

description: <b>NOTE: Be sure you are using the most recent version of this repository.</b><br><br>These files include data and code used to create tables and figures for "Combining Family History and Machine Learning to Link Historical Records: The Census Tree Data Set" (citation below). We have included the truth set that we use to train our model along with the machine learning code we use to link records using this truth set. Our truth set includes histid pairs between the different census records, which can be combined with the restricted versions of the full-count census records that are distributed through the University of Minnesota.<br><br>For more details, see the "Read Me" file and the published paper at:<br><br>Price, J., Buckles, K., Van Leeuwen, J., & Riley, I. (2021). Combining family history and machine learning to link historical records: The Census Tree data set. Explorations in Economic History, 80, 101391.<br>https://www.sciencedirect.com/science/article/pii/S0014498321000024<br>
DOI: 10.18119/n90g6w
title: Network of transcription factors involved in astrocyte and immune signaling
DOI: 10.5281/zenodo.5091955
title: Systematic Scoping Literature Review of Embryonic Stem Cells In Vitro Developmental Toxicity Tests: Included publications library

description: The publications included in the systematic scoping review conducted according to the protocol:https://zenodo.org/record/2528920
DOI: 10.5281/zenodo.5091954
title: Systematic Scoping Literature Review of Embryonic Stem Cells In Vitro Developmental Toxicity Tests: Included publications library

description: The publications included in the systematic scoping review conducted according to the protocol:https://zenodo.org/record/2528920
DOI: 10.5281/zenodo.4657362
title: Large-Scale Atmospheric Drivers of Snowfall over Thwaites Glacier, Antarctica

description: Monthly RACMO2 snowfall rates (1979-2015, in mm w.e. per month), as described in Lenaerts et al., 2018 (https://www.cambridge.org/core/journals/annals-of-glaciology/article/climate-and-surface-mass-balance-of-coastal-west-antarctica-resolved-by-regional-climate-modelling/E3DD6D0DA914C6031F96A548AF53603A), and used in this paper.
DOI: 10.5281/zenodo.4657361
title: Large-Scale Atmospheric Drivers of Snowfall over Thwaites Glacier, Antarctica

description: Monthly RACMO2 snowfall rates (1979-2015, in mm w.e. per month), as described in Lenaerts et al., 2018 (https://www.cambridge.org/core/journals/annals-of-glaciology/article/climate-and-surface-mass-balance-of-coastal-west-antarctica-resolved-by-regional-climate-modelling/E3DD6D0DA914C6031F96A548AF53603A), and used in this paper.
DOI: 10.5281/zenodo.5093797
title: Acartia tonsa 25 generation experimental evolution

description: Supplemental data for our <em>Acartia tonsa</em> 25 generation experimental evolution project.
DOI: 10.6084/m9.figshare.14962950
title: Pan_etal_NatCom_2021_Lexical_Previewing

description: In spite of the reduced visual acuity, parafoveal information plays a critical role in natural reading1; however, it is strongly debated whether words are previewed parafoveally at the lexical level2–9. This is a key dispute for competing models on reading and of great significance since lexical retrieval is important for guiding eye movements. We found evidence for parafoveal previewing at the lexical level by combining a novel <em>rapid invisible frequency tagging</em> (RIFT)10, 11 approach with magnetoencephalography (MEG) and eye-tracking. In a silent reading task, target words of either low or high lexical frequency were tagged (flickered) subliminally at 60 Hz. The tagging response measured when fixating on the pre-target word reflected parafoveal previewing of the target word. We observed a stronger tagging response as early as 100 ms following fixations on pre-target words that were followed by target words of low compared with high lexical frequency. Moreover, the difference in tagging response with respect to target lexicality predicted individual reading speed. Our findings demonstrate that reading unfolds in the fovea and parafovea simultaneously to support fluent reading.
DOI: 10.6084/m9.figshare.14963721
title: racon.Ogor.odd.ver1.fasta.gz

description: This is an early version of the pink salmon genome assembly. The final version of this genome assembly can be found on the NCBI webpage (accession: GCA_017355495.1). This assembly was published because it was used to generate a database of variants used in a study. The variants are also available in this repository. The following scripts were used to map these variants to other genome assemblies: https://github.com/KrisChristensen/MapVCF2NewGenome.<br>
DOI: 10.18739/a2s17st50
title: Soil Water, plant xylem water, and leaf wax hydrogen isotope survey from Toolik Lake Area 2013-2014

description: This dataset accompanies a manuscript published in Geochimica et Cosmochimica Acta (http://dx.doi.org/10.1016/j.gca.2017.06.028). The leaf wax (n-alkane and n-acid) hydrogen isotopes are a common proxy for paleoclimate reconstructions from lake sediment cores. Yet, the interpretation of leaf wax hydrogen-2/hydrogen-1 (2H/1H) records hinges on our understanding of the modern systematics of water isotope fractionation and source water seasonality within ecosystems and among different plant species. This dataset contains hydrogen (and oxygen) isotope data from Arctic Alaska, measured in precipitation, soil water, as well as plant xylem and leaf water from two common tundra species, Betula nana and Eriophorum vaginatum. In addition to the water isotope measurements, this data package contains leaf wax distributions and 2H/1H values for the same two species, as well as in surface sediment samples from a suite of lakes and in sediment trap samples collected from the Arctic Long Term Ecological Research (ARC LTER) study lake, Lake E5.
DOI: 10.6073/pasta/b024b21f2d0da5e4fab07ca403d06d90
title: Water Quality Data (Grab Samples) from the Taylor Slough, Everglades National Park (FCE LTER), from May 2001 to Present

description: Water quality samples are being collected using ISCO autosamplers at all wetland sites (that is, all sites except TS/Ph-9, 10, and 11). The autosamplers contain 24 1L bottles. Water is sampled by programming the autosamplers to take composite samples once every 3 days. These samples are a composite of four 250mL subsamples drawn every 18 hours (a sampling scheme that captures a dawn, noon, dusk, and midnight sample in every three day composite). The samples are collected every 3-4 weeks and analyzed for total phosphorus (TP), total nitrogen (TN), and salinity. When sites are visited to collect these samples, we also collect a grab sample that is immediately put on ice. A portion of these grab samples is filtered through a Whatman GF/F filter immediately upon return to the lab, and the filtered samples are analyzed for inorganic nutrients such as NO2-, NO3-, NH4+, SRP, and DOC. The unfiltered fraction of these grab samples is analyzed for TP, TN, and TOC. We use these montly grab samples to generate relationships between TP and SRP, and between TN and NO2- + NO3- + NH4+. Dissolved nutrients are measured using standard rapid flow analyzer (RFA) techniques. TP is analyzed with a modified Solorzano and Sharp (1980) technique. TN is measured with an Antec TN analyzer, TOC and DOC are quantified on a Shimadzu TOC Analyzer, and salinity is measured with a YSI conductivity meter. In addition to the regular water quality monitoring, we use the rain level actuators at all freshwater sites to trigger water sampling after rain events exceed a given threshold of duration and/or intensity. As currently programmed, when the threshold of = 2.5 cm of rain per hour is passed, the autosampler at that site collects a 500mL sample 30 minutes after the threshold has been reached. Rain event samples are collected, treated, and analyzed as all other water quality samples.
DOI: 10.6084/m9.figshare.12543080
title: Gold Open Access 2014-2019 (GOA5)

description: Gold open access journals in DOAJ as of the end of 2019, including article counts for each year 2014-2019, author-side fees (including submission and membership fees) and some other information.<br>
DOI: 10.6084/m9.figshare.14963739
title: variants.GATK.iteration.1.Full.sorted.vcftools.biAllelicSNP.maf05.mm0.9.recode.vcf.gz

description: Nucleotide variants used in a publication (Title: The pink salmon genome: Uncovering the genomic consequences of a strict two-year life-cyclep { margin-bottom: 0.25cm; line-height: 115%; background: transparent }a:link { color: #000080; so-language: zxx; text-decoration: underline }). Please refer to this publication for the methods and sampling locations. These variants were identified from whole-genome resequencing data from 61 individuals using GATK. The genome the resequencing data was identified from is available in this repository (10.6084/m9.figshare.14963721). These variants were also mapped to various genomes using the following scripts: https://github.com/KrisChristensen/MapVCF2NewGenome<br>
DOI: 10.34740/kaggle/dsv/2419483
title: US counties COVID 19 dataset
DOI: 10.6084/m9.figshare.14963733
title: Electronic Supporting Information for: "Using automated serendipity to discover how trace water promotes and inhibits lead halide perovskite crystal formation"

description: Complete data sets and Mathematica 12.1 and Python 3.7 codes used for data analysis and figure generation.
DOI: 10.6084/m9.figshare.14963733.v1
title: Electronic Supporting Information for: "Using automated serendipity to discover how trace water promotes and inhibits lead halide perovskite crystal formation"

description: Complete data sets and Mathematica 12.1 and Python 3.7 codes used for data analysis and figure generation.
DOI: 10.5281/zenodo.5090747
title: Neuropixels recordings from GCaMP6f+ mice for Siegle, Ledochowitsch et al. (2021)

description: NWB files for a novel Neuropixels electrophysiology dataset from transgenic mice expressing GCaMP6f, as well as additional wild type mice. This dataset was used in a comparison of electrophysiology and two-photon imaging data, which appears in Siegle, Ledochowitsch et al. (2021) eLife. For information about experimental procedures, see Siegle, Jia et al. (2021) Nature 592, 86-92 (https://www.nature.com/articles/s41586-020-03171-x). For information about file contents, see https://allensdk.readthedocs.io/en/latest/visual_coding_neuropixels.html Files were generated with a custom branch of the AllenSDK, available at https://github.com/jsiegle/allensdk/tree/ophys-ephys. We recommend using the same branch to interact with these files.
DOI: 10.5281/zenodo.5090746
title: Neuropixels recordings from GCaMP6f+ mice for Siegle, Ledochowitsch et al. (2021)

description: NWB files for a novel Neuropixels electrophysiology dataset from transgenic mice expressing GCaMP6f, as well as additional wild type mice. This dataset was used in a comparison of electrophysiology and two-photon imaging data, which appears in Siegle, Ledochowitsch et al. (2021) eLife. For information about experimental procedures, see Siegle, Jia et al. (2021) Nature 592, 86-92 (https://www.nature.com/articles/s41586-020-03171-x). For information about file contents, see https://allensdk.readthedocs.io/en/latest/visual_coding_neuropixels.html Files were generated with a custom branch of the AllenSDK, available at https://github.com/jsiegle/allensdk/tree/ophys-ephys. We recommend using the same branch to interact with these files.
DOI: 10.5519/qd.615z85t3
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4840338 records)
DOI: 10.3886/e119446v112
title: COVID-19 US State Policy Database

description: For questions or comments about the database please contact:<br>Alexandra Skinner <br>skinnera@bu.edu <br>Research Fellow & Database Manager<br>Department of Health Law, Policy & Management <br>Boston University School of Public Health<br><br>Database of state policies on closures, shelter-in-place orders, housing protections, changes to Medicaid and SNAP, physical distancing closures, reopening, and more created by researchers at the Boston University School of Public Health. Policies included are state-wide directives or mandates, not guidance or recommendations. In order for a policy to be included, it must apply to the entire state. We are working quickly to go through state government websites to make the policy database as complete and accurate as possible in a rapidly changing policy context. If you use data on a given policy, we encourage you to triangulate based on additional sources of policy data and to review the source documentation to consider the coding decisions that are right for your work. Of course, please email us if you note a discrepancy so we can improve the database for everyone. State policy source documentation can be found at: tinyurl.com/statepolicysources.
description: State policies. Smallest Geographic Unit: State
description: other; Contributors: Megan Cole Brahim, Noa Krawczyk, Carolyn Hoffman, Claire Corkish, Elizabeth Ferrara, Elizabeth Long, Emily Baroni, Faith Contador, Hannah Simon, Morgan Simko, Rachel Scheckman, Sarah Brewer, Sue Kulkarni, Felicia Heykoop, Manish Patel, Aishwarya Vidyasagaran, Andrew Chiao, Cara Safon, Samantha Burkhart, Harry Jung, Victor Lee, Marina MacKinnon, Aarohi Rede, Marie Vearling, Sophie Li, Christina Wang, Tim Levengood, María Jordán P. Emma Chistolini
DOI: 10.6084/m9.figshare.14462052
title: Data

description: Dataset with Human Attention and attention weights of two neural models
DOI: 10.6084/m9.figshare.14462052.v2
title: Data

description: Dataset with Human Attention and attention weights of two neural models
DOI: 10.6084/m9.figshare.14462052.v1
title: Data

description: Dataset with Human Attention and attention weights of two neural models
DOI: 10.7910/dvn/1hbejv
title: Replication Data for: Public Reactions to Non-Compliance with Judicial Orders

description: Constitutions empower people to ask judges for binding orders directing state agents to remedy rights violations, but state agents do not always comply. Scholars propose that by making it easier to observe non-compliance, courts can leverage public pressure for compliance when it exists. Yet, exposure to information about non-compliance might lead individuals to accept high levels of non-compliance and reduce support for judicial remedies. We estimate the rate of non-compliance with judges' orders via a rigorous tracking study of the Colombian tutela. We then embed this rate in three survey experiments fielded with online national quota samples. We show that people find the non-compliance rate in the tutela highly unacceptable regardless of a variety of mitigating factors. We also show that public reactions to this information depends on prior expectations, a finding that stresses the importance of scholarship in cognitive psychology for studies of compliance in law and politics.
DOI: 10.5281/zenodo.5093942
title: Table 1: Publications found in the Scopus and Web of Science database from 2000 to 2019 (excluding duplicate articles) on the topic of biorefineries.

description: Table referring to the study of systematic literature review on the social impact of small and medium-sized biorefineries.
DOI: 10.5281/zenodo.5093941
title: Table 1: Publications found in the Scopus and Web of Science database from 2000 to 2019 (excluding duplicate articles) on the topic of biorefineries.

description: Table referring to the study of systematic literature review on the social impact of small and medium-sized biorefineries.
DOI: 10.5281/zenodo.5093943
title: CoVaxxy Tweet IDs data set

description: A collection of Tweet IDs related to Covid-19 Vaccines, gathered from Twitter since Jan 4, 2021. Please see https://arxiv.org/abs/2101.07694 for more information.
DOI: 10.6084/m9.figshare.14964043
title: ecg-polar-h10-set3

description: Single-lead ECG tracings along with heart rate and 3-axis chest actigraphy using a Polar H10 sensor worn with on a Polar Pro chest strap, with data transferred via bluetooth to an Android smartphone (Realme 6i) that serves as a bluetooth receptor unit and data recorder via the Polar Sensor Logger app on Android by Jukka Happonen (Polar developer, this app is unofficial): https://play.google.com/store/apps/details?id=com.j_ware.polarsensorlogger<br>Data was compressed with 7-zip using LZMA2 in Normal compression setting and split into 5GB parts to respect the file size limit of figshare. Total is 20 GB compressed, 82.1 GB uncompressed.<br>This dataset covers the period from 2021-04-21 to 2021-07-12. There is no overlap with previous sets, this is the continuation. See other sets for further data.<br>This wearable was only worn when at home.<br>Each file represents one acquisition session, of variable time up to 140h in one session. The acquisition software also split files when the device is temporarily out of reach, so there several files with very few entries, which means the device was barely reachable or went in and out of bluetooth range. These files can be concatenated to study a longer time period. There are 4 types of files: ECG for the raw ECG at 133Hz sampling rate, HR for the heart-rate computed by the proprietary Polar embedded software in the H10 sensor and also the IBI (inter-beats intervals) to ease calculation of HRV (heart rate variability), ACC for the 3-axis (accelerometer = translation axes) chest actigraphy set at 100Hz sampling rate and 4g sampling resolution, and Marker which are manual markers by the operator to mark special temporal events but they were not used for this study so they are either deleted or empty. For the full technical specification of the Polar H10 device, see: https://github.com/polarofficial/polar-ble-sdk/tree/master/technical_documentation