cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25493/va01-brd
title: A configurable and empirical model of the synaptic proteome (SQLite database) - Extension with ASD mutations

description: Integration of 57 published synaptic proteomic datasets reveals a stunningly complex picture involving over 7000 proteins. At the post-synaptic side, multiple studies over the past 19 years appear to be reaching a consensus in terms of gross number and identity of the constituent proteins. Presynaptically the story remains more dynamic with fewer studies and each new study adding new components to the landscape. Molecular complexes were reconstructed using evidence-based protein-protein interaction data available from public databases. The constructed molecular interaction network model is embedded into an SQLite implementation allowing queries that generate custom network models based on meta-data including species, synaptic compartment, brain region, and method of extraction. This updated version (from 11th January 2021) is based on [the previous version from 22nd October 2019](https://doi.org/10.25493/QQ55-63T) and has been expanded to include additional information for Autism Spectrum Disorder (ASD) mutations collected from 3 different databases. This resulted in a table containing 9855 unique mutations with known cDNA variants, corresponding to 603 synaptic genes with information about e.g. chromosome, position, protein variant.
DOI: 10.25345/c5zg6gh76
title: MassIVE MSV000091799 - GNPS(author:Nipun Abhinav) Cissus quadranglaris stem alcoholic extract, orbitrap positive mode
title: LC-MS/MS data of crude alcoholic extract of stem of the plant Cissus quadragularis belonging to family Vitaceae.
DOI: 10.6084/m9.figshare.22692298
title: root_profile_data_by_study_site.csv

description: cumulative root 'mass' (unit depending on study) over depth for each root profile included in this study. Data were copied as reported or extracted from figures.
DOI: 10.6084/m9.figshare.22692298.v1
title: root_profile_data_by_study_site.csv

description: cumulative root 'mass' (unit depending on study) over depth for each root profile included in this study. Data were copied as reported or extracted from figures.
DOI: 10.6084/m9.figshare.22698889
title: metadata_withmodelfits_and_clusters.csv

description: Metadata file of all root profiles included in the study including dominant species, Active layer thickness, organic layer depth, as well as climate data from worldclim and chelsa, calculated D50 and c, and root profile type (cluster) assigned (see manuscript for details).
DOI: 10.15468/yat4hn
title: Base de datos de plantas vasculares del País Vasco: ARAN-EH

description: Base de datos creada en el 2006 con la ayuda del Departamento de Medio Ambiente y Política Territorial del Gobierno Vasco. Contiene información sobre plantas vasculares del País Vasco y territorios limítrofes referentes a citas bibliográficas. Actualmente, cuenta con 202.412 citas correspondientes a 4.970 especies. Asimismo, están registrados 1.028 libros/artículos. Además de las citas bibliográficas, Aranzadi Science Society cuenta con otro amplio registro de datos referente a pliegos de Herbario. Éstos corresponden a otro conjunto de datos, Aranzadi Zientzi Elkartea.
DOI: 10.6084/m9.figshare.22699150
title: metrics.tar

description: it's just a test
DOI: 10.6084/m9.figshare.22699150.v1
title: metrics.tar

description: it's just a test
DOI: 10.15468/t5sevf
title: Herbario ARAN
DOI: 10.15468/fy7spc
title: Herbario VIT - Plantas Vasculares (Museo de Historia Natural de Álava)

description: El herbario VIT Plantas Vasculares (helechos y fanerógamas) contiene aprox. 139.000 hojas pertenecientes a unos 9.650 taxones y 119 tipos. El 70% de esta colección está informatizada. Fue fundada en 1975 por Pedro Uribe-Echebarría y Luis Antonio Pérez de Heredia, la mayoría de sus ejemplares están recolectados desde entonces, pero también alberga dos herbarios históricos, uno que data del siglo XVIII (el herbario de Lorenzo Prestamero) y el otro de el siglo XIX (herbario de José María de Lacoizqueta)
DOI: 10.6084/m9.figshare.22698292
title: Database for Carbonate-rich crust subduction drives the deep carbon and chlorine cycles

description: This database belongs to the paper "Carbonate-rich crust subduction drives the deep carbon and chlorine cycles", and includes Extended Data Table 1, Extended Data Table 2, Supplementary Data 1, and Supplementary Data 2.
DOI: 10.17028/rd.lboro.22634218
title: A reactive interatomic potential for the simulation of sodium phosphate glass

description: Input and analysis codes to accompany the paper "A reactive interatomic potential for the simulation of sodium phosphate glass", about to be submitted. Not all output files are included for space reasons, but the files given are sufficient to reproduce the methodology in the paper.
DOI: 10.17028/rd.lboro.22634218.v1
title: A reactive interatomic potential for the simulation of sodium phosphate glass

description: Input and analysis codes to accompany the paper "A reactive interatomic potential for the simulation of sodium phosphate glass", about to be submitted. Not all output files are included for space reasons, but the files given are sufficient to reproduce the methodology in the paper.
DOI: 10.6084/m9.figshare.22672984
title: MBE_Prey_toxins_datasets

description: Supplementary Datasets： S1 Hc-Results of venom proteome quantification S2 Hh-Results of venom proteome quantification S3 Hc-Results of venom gland proteome quantification S4 Hh-Results of venom gland proteome quantification S5 Hc-Results of quantification of venom gland transcriptome(FPKM) S6 Hh-Results of quantification of venom gland transcriptome(FPKM) S7 Hc-Results of miRNA quantification(TPM) S8 Hh-Results of miRNA quantification(TPM) S9 Hc-Results of lncRNA annotation and quantification(FPKM) S10 Hh-Results of lncRNA annotation and quantification(FPKM) S11 Hc-GO enrichment of up and down regulated genes S12 Hh-GO enrichment of up and down regulated genes S13 Hc-KEGG enrichment of up and down regulated genes S14 Hh-KEGG enrichment of up and down regulated genes S15 Hc-Results of miRNA-mRNA co-expression and target gene prediction S16 Hh-Results of miRNA-mRNA co-expression and target gene prediction S17 Hc-Results of miRNA-lncRNA co-expression and target gene prediction S18 Hh-Results of miRNA-lncRNA co-expression and target gene prediction S19 Hc-Analysis of ceRNAScore (Top100) S20 Hh-Analysis of ceRNAScore (Top100) S21 Hc-Toxin-Seq S22 Hh-Toxin-Seq
DOI: 10.6084/m9.figshare.22672984.v1
title: MBE_pery_toxins_datasets

description: Supplementary Datasets： S1 Hc-Results of venom proteome quantification S2 Hh-Results of venom proteome quantification S3 Hc-Results of venom gland proteome quantification S4 Hh-Results of venom gland proteome quantification S5 Hc-Results of quantification of venom gland transcriptome(FPKM) S6 Hh-Results of quantification of venom gland transcriptome(FPKM) S7 Hc-Results of miRNA quantification(TPM) S8 Hh-Results of miRNA quantification(TPM) S9 Hc-Results of lncRNA annotation and quantification(FPKM) S10 Hh-Results of lncRNA annotation and quantification(FPKM) S11 Hc-GO enrichment of up and down regulated genes S12 Hh-GO enrichment of up and down regulated genes S13 Hc-KEGG enrichment of up and down regulated genes S14 Hh-KEGG enrichment of up and down regulated genes S15 Hc-Results of miRNA-mRNA co-expression and target gene prediction S16 Hh-Results of miRNA-mRNA co-expression and target gene prediction S17 Hc-Results of miRNA-lncRNA co-expression and target gene prediction S18 Hh-Results of miRNA-lncRNA co-expression and target gene prediction S19 Hc-Analysis of ceRNAScore (Top100) S20 Hh-Analysis of ceRNAScore (Top100) S21 Hc-Toxin-Seq S22 Hh-Toxin-Seq
DOI: 10.6084/m9.figshare.22672984.v2
title: MBE_Prey_toxins_datasets

description: Supplementary Datasets： S1 Hc-Results of venom proteome quantification S2 Hh-Results of venom proteome quantification S3 Hc-Results of venom gland proteome quantification S4 Hh-Results of venom gland proteome quantification S5 Hc-Results of quantification of venom gland transcriptome(FPKM) S6 Hh-Results of quantification of venom gland transcriptome(FPKM) S7 Hc-Results of miRNA quantification(TPM) S8 Hh-Results of miRNA quantification(TPM) S9 Hc-Results of lncRNA annotation and quantification(FPKM) S10 Hh-Results of lncRNA annotation and quantification(FPKM) S11 Hc-GO enrichment of up and down regulated genes S12 Hh-GO enrichment of up and down regulated genes S13 Hc-KEGG enrichment of up and down regulated genes S14 Hh-KEGG enrichment of up and down regulated genes S15 Hc-Results of miRNA-mRNA co-expression and target gene prediction S16 Hh-Results of miRNA-mRNA co-expression and target gene prediction S17 Hc-Results of miRNA-lncRNA co-expression and target gene prediction S18 Hh-Results of miRNA-lncRNA co-expression and target gene prediction S19 Hc-Analysis of ceRNAScore (Top100) S20 Hh-Analysis of ceRNAScore (Top100) S21 Hc-Toxin-Seq S22 Hh-Toxin-Seq
DOI: 10.6084/m9.figshare.22698589
title: Data from: Feather corticosterone reveals that urban great tits experience lower corticosterone exposure than forest individuals during dominance-rank establishment

description: Data from article published in Conservation Physiology: Feather corticosterone reveals that urban great tits experience lower corticosterone exposure than forest individuals during dominance-rank establishment. Dataset comprises measurements of corticosterone in feathers of urban- and forest-dwelling great tits <em>Parus major</em>. Birds were captured in replicated urban and forest sites in southern Sweden. Two tail feathers (second outermost retrices) were collected from each bird (from a few birds, only one feather was collected), and age (juvenile or adult), sex (female or male) and body mass (in grams) were recorded. Corticosterone in feathers (fCORT) was quantified by ELISA assay (Cayman Chemical, US, product no. 501320), in duplicate, according to the manufacturer instructions. fCORT is corrected for assay dilution and feather length to give fCORT_pg_mm. Refer to the file fCORT_urban_forest_metadata.txt for data definitions.
DOI: 10.5519/qd.80qyssqc
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.6084/m9.figshare.22698655.v1
title: PMTransformer pre-trained model

description: Pretrained Machine learning models for MOFTransformer and PMTransformer.
DOI: 10.5517/ccdc.csd.cc27jnxc
title: CCDC 2071603: Experimental Crystal Structure Determination

description: Related Article: Xinyu Zhang, Jinli Zhang, Jie Chen, Banghua Zhou, Jian Zhang, Shunhong Chen, Jian Wu, Yaojia Jiang|2023|Org.Biomol.Chem.|21|3345|doi:10.1039/D3OB00222E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bl99k
title: CCDC 2162538: Experimental Crystal Structure Determination

description: Related Article: Lin-Feng Yang, Ming Zhang, Yuna Shimadate, Atsushi Kato, Tian-Yang Liu Hou, Yi-Xian Li, Yue-Mei Jia, George W. J. Fleet, Chu-Yi Yu|2023|Org.Biomol.Chem.|21|3453|doi:10.1039/D3OB00404J
description: Related Article: Linfeng Yang|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bl9r0
title: CCDC 2162552: Experimental Crystal Structure Determination

description: Related Article: Linfeng Yang|2022|CSD Communication|||
description: Related Article: Lin-Feng Yang, Ming Zhang, Yuna Shimadate, Atsushi Kato, Tian-Yang Liu Hou, Yi-Xian Li, Yue-Mei Jia, George W. J. Fleet, Chu-Yi Yu|2023|Org.Biomol.Chem.|21|3453|doi:10.1039/D3OB00404J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bl9s1
title: CCDC 2162553: Experimental Crystal Structure Determination

description: Related Article: Linfeng Yang|2022|CSD Communication|||
description: Related Article: Lin-Feng Yang, Ming Zhang, Yuna Shimadate, Atsushi Kato, Tian-Yang Liu Hou, Yi-Xian Li, Yue-Mei Jia, George W. J. Fleet, Chu-Yi Yu|2023|Org.Biomol.Chem.|21|3453|doi:10.1039/D3OB00404J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bl9v3
title: CCDC 2162555: Experimental Crystal Structure Determination

description: Related Article: Linfeng Yang|2022|CSD Communication|||
description: Related Article: Lin-Feng Yang, Ming Zhang, Yuna Shimadate, Atsushi Kato, Tian-Yang Liu Hou, Yi-Xian Li, Yue-Mei Jia, George W. J. Fleet, Chu-Yi Yu|2023|Org.Biomol.Chem.|21|3453|doi:10.1039/D3OB00404J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2blb09
title: CCDC 2162560: Experimental Crystal Structure Determination

description: Related Article: Linfeng Yang|2022|CSD Communication|||
description: Related Article: Lin-Feng Yang, Ming Zhang, Yuna Shimadate, Atsushi Kato, Tian-Yang Liu Hou, Yi-Xian Li, Yue-Mei Jia, George W. J. Fleet, Chu-Yi Yu|2023|Org.Biomol.Chem.|21|3453|doi:10.1039/D3OB00404J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f7g6c
title: CCDC 2241492: Experimental Crystal Structure Determination

description: Related Article: Jia Hui Ng, Felicia Phei Lin Lim, Edward R. T. Tiekink, Anton V. Dolzhenko|2023|Org.Biomol.Chem.|21|3432|doi:10.1039/D3OB00350G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f7g7d
title: CCDC 2241493: Experimental Crystal Structure Determination

description: Related Article: Jia Hui Ng, Felicia Phei Lin Lim, Edward R. T. Tiekink, Anton V. Dolzhenko|2023|Org.Biomol.Chem.|21|3432|doi:10.1039/D3OB00350G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f7g8f
title: CCDC 2241494: Experimental Crystal Structure Determination

description: Related Article: Jia Hui Ng, Felicia Phei Lin Lim, Edward R. T. Tiekink, Anton V. Dolzhenko|2023|Org.Biomol.Chem.|21|3432|doi:10.1039/D3OB00350G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f7g9g
title: CCDC 2241495: Experimental Crystal Structure Determination

description: Related Article: Jia Hui Ng, Felicia Phei Lin Lim, Edward R. T. Tiekink, Anton V. Dolzhenko|2023|Org.Biomol.Chem.|21|3432|doi:10.1039/D3OB00350G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f7xxj
title: CCDC 2241948: Experimental Crystal Structure Determination

description: Related Article: Naveen J. Roy, Parappa L. Pujari, Pinaki Talukdar|2023|Org.Biomol.Chem.|21|3323|doi:10.1039/D3OB00269A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f7xzl
title: CCDC 2241950: Experimental Crystal Structure Determination

description: Related Article: Naveen J. Roy, Parappa L. Pujari, Pinaki Talukdar|2023|Org.Biomol.Chem.|21|3323|doi:10.1039/D3OB00269A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fb0tm
title: CCDC 2243960: Experimental Crystal Structure Determination

description: Related Article: Ekaterina A. Filatova, Eugeny A. Ermolenko, Alexander F. Pozharskii, Valery A. Ozeryanskii, Oleg P. Demidov, Anatoly V. Chernyshev, Anatoly V. Metelitsa, Anna V. Gulevskaya|2023|Org.Biomol.Chem.|21|3388|doi:10.1039/D3OB00286A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fb0vn
title: CCDC 2243961: Experimental Crystal Structure Determination

description: Related Article: Ekaterina A. Filatova, Eugeny A. Ermolenko, Alexander F. Pozharskii, Valery A. Ozeryanskii, Oleg P. Demidov, Anatoly V. Chernyshev, Anatoly V. Metelitsa, Anna V. Gulevskaya|2023|Org.Biomol.Chem.|21|3388|doi:10.1039/D3OB00286A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fb0wp
title: CCDC 2243962: Experimental Crystal Structure Determination

description: Related Article: Ekaterina A. Filatova, Eugeny A. Ermolenko, Alexander F. Pozharskii, Valery A. Ozeryanskii, Oleg P. Demidov, Anatoly V. Chernyshev, Anatoly V. Metelitsa, Anna V. Gulevskaya|2023|Org.Biomol.Chem.|21|3388|doi:10.1039/D3OB00286A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fb0xq
title: CCDC 2243963: Experimental Crystal Structure Determination

description: Related Article: Ekaterina A. Filatova, Eugeny A. Ermolenko, Alexander F. Pozharskii, Valery A. Ozeryanskii, Oleg P. Demidov, Anatoly V. Chernyshev, Anatoly V. Metelitsa, Anna V. Gulevskaya|2023|Org.Biomol.Chem.|21|3388|doi:10.1039/D3OB00286A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fb0yr
title: CCDC 2243964: Experimental Crystal Structure Determination

description: Related Article: Ekaterina A. Filatova, Eugeny A. Ermolenko, Alexander F. Pozharskii, Valery A. Ozeryanskii, Oleg P. Demidov, Anatoly V. Chernyshev, Anatoly V. Metelitsa, Anna V. Gulevskaya|2023|Org.Biomol.Chem.|21|3388|doi:10.1039/D3OB00286A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fb0zs
title: CCDC 2243965: Experimental Crystal Structure Determination

description: Related Article: Ekaterina A. Filatova, Eugeny A. Ermolenko, Alexander F. Pozharskii, Valery A. Ozeryanskii, Oleg P. Demidov, Anatoly V. Chernyshev, Anatoly V. Metelitsa, Anna V. Gulevskaya|2023|Org.Biomol.Chem.|21|3388|doi:10.1039/D3OB00286A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fb10v
title: CCDC 2243966: Experimental Crystal Structure Determination

description: Related Article: Ekaterina A. Filatova, Eugeny A. Ermolenko, Alexander F. Pozharskii, Valery A. Ozeryanskii, Oleg P. Demidov, Anatoly V. Chernyshev, Anatoly V. Metelitsa, Anna V. Gulevskaya|2023|Org.Biomol.Chem.|21|3388|doi:10.1039/D3OB00286A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.