cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.848189
title: Gridded results in 150 m resolution of swath bathymetry during two Nathaniel B. Palmer cruise, section Transit4

description: In order to download data, please request access from Laura Robinson (laura.robinson@bristol.ac.uk).
DOI: 10.25549/inscriptifact-ouc110216759
title: Persepolis Fortification Elamite Tablet 0314.104, Fort 0314.104

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 0314.104 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on reverse. ❧ [Physical Object Note:] Broken left edge, upper edge. Large crack on reverse.
DOI: 10.1594/pangaea.88865
title: Chemical analysis of Calyptogena from sample 2658-2, Marginal Ridge off Oregon
DOI: 10.1594/pangaea.88861
title: Chemical analysis of Calyptogena from sample 2656, Marginal Ridge off Oregon
DOI: 10.1594/pangaea.88866
title: Chemical analysis of Calyptogena 1 from sample 2046, Second Ridge off Oregon
DOI: 10.1594/pangaea.88867
title: Chemical analysis of Calyptogena 2, outer shell from sample 2046, Second Ridge off Oregon
DOI: 10.25549/inscriptifact-ouc110216706
title: Scans

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 0266.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impressions on left edge, reverse. ❧ [Physical Object Note:] Cracks on left edge, reverse, right edge. Some wear and damage on obverse, reverse
DOI: 10.25549/inscriptifact-ouc110219527
title: Scans

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 0965.201 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impressions on reverse, upper edge. ❧ [Physical Object Note:] Much of tablet broken off.
DOI: 10.25549/kada-ouc11399lkeo
title: Japanese American Citizens League : correspondence, 1971-1973

description: Japanese American Citizens League : correspondence, 1971-1973
DOI: 10.1594/pangaea.88857
title: Chemical analysis of concretion from sample 1428, Marginal Ridge off Oregon
DOI: 10.1594/pangaea.956428
title: Radiochemical data for manganese crust sample CYP-74-26-12

description: Scoriaceous Mn crust fragments on travertine-like nontronite deposit were retrieved near two hydrothermal vents while surveying the rift valley of the Mid-Atlantic Ridge using the diving saucer "CYANA". They have been examined with SEM and with an EDAX (X-ray energy dispersive analysis) apparatus coupled to SEM. Fifteen successive thin layers were taken from the upper surface downward. They were totally dissolved in HCl-HF-HClO4 and spiked with 232U and 228Th as yield tracers. Thin sources of purified U::and Th were prepared and counted by alpha spectrometry.
description: From 1983 until 1989 NOAA-NCEI compiled the NOAA-MMS Marine Minerals Geochemical Database from journal articles, technical reports and unpublished sources from other institutions. At the time it was the most extended data compilation on ferromanganese deposits world wide. Initially published in a proprietary format incompatible with present day standards it was jointly decided by AWI and NOAA to transcribe this legacy data into PANGAEA. This transfer is augmented by a careful checking of the original sources when available and the encoding of ancillary information (sample description, method of analysis...) not present in the NOAA-MMS database.This dataset represents the digitized Table II, pp. 253 of the related publication.
DOI: 10.1594/pangaea.548645
title: Annual means of density, δ¹⁸O, deuterium, tritium, and accumulation rates of firn core FRI14C90_336

description: Temperature of ice at 10 m depth: -26.1 deg C
DOI: 10.25549/inscriptifact-ouc110216701
title: Scans

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 0266.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impressions on left edge, reverse. ❧ [Physical Object Note:] Cracks on left edge, reverse, right edge. Some wear and damage on obverse, reverse
DOI: 10.25549/inscriptifact-ouc110219473
title: Scans

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 1304.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform, Aramaic ❧ [Physical Object Description:] Clay tablet with cuneiform text and Aramaic text. Seal impression on upper edge. ❧ [Physical Object Note:] Lower left and upper right corners broken. Large hole and cracks on obverse. Broken areas on right edge.
DOI: 10.1594/pangaea.973840
title: Mesozooplankton biomass under the Amazon River Plume influence measured during cruise Camadas Finas III

description: Zooplankton samples were collected in October 2012 aboard the Camadas Finas III cruise, using bongo nets with a 300 µm mesh size. The cruise followed the distribution of the Amazon River Plume across coastal and oceanic waters during the retroflection period of the North Brazil Current. For each sample, size fractions (&gt;1 mm and &lt;1 mm) were digitized using a ZooScan device (resolution: 2400 dpi) and analyzed using ZooProcess software. Images were counted, measurements were estimated, and data were organized into size bins. All living particles were subjected to quality control protocols established by The Pelagic Size Structure Database (PSSdb; https://pssdb.net/). A lower threshold of 600 µm was defined, while the upper threshold was determined by the largest size class prior to three consecutive empty size classes. Particles within these thresholds were used to estimate abundance, biovolume, biomass, and Normalized Biovolume Size Spectra (NBSS). For different taxonomic units, these data are summarized in the respective columns.
DOI: 10.25549/kada-ouc11399lken
title: Japanese American Citizens League : correspondence, 1971-1973

description: Japanese American Citizens League : correspondence, 1971-1973
DOI: 10.1594/pangaea.548933
title: Annual means of density, δ¹⁸O, and accumulation rates of snow pit FRI07S84_340

description: Temperature of ice at 10 m depth: -26.9 deg C
DOI: 10.1594/pangaea.55776
title: Various flux data of organic material modeled for the North Atlantic

description: Gridded data set (2 x 2 degree) of modeled flux rates
DOI: 10.1594/pangaea.548655
title: Density and δ¹⁸O of snow pit FRI10S90_136

description: Temperature of ice at 10 m depth: -23.5 deg C
DOI: 10.3535/f5t-t0m-w01
title: Tyto Billberg, 1828

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r1k-lr7-mjm
title: †Pseudorbitoides trechmanni Douvillé, 1922

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ja2-vw1-28r
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xqs-tcw-9wz
title: †Pseudorbitoides trechmanni Douvillé, 1922

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ge9-z6g-6t8
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mep-2mx-kej
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x5y-hce-15r
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2l6-4l9-6lf
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bj1-ewa-qat
title: †Orbitoides d'Orbigny, in Lyell, 1848

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.29941004
title: Graph data reference

description: References for figures in the article
DOI: 10.6084/m9.figshare.29941004.v1
title: Graph data reference

description: References for figures in the article
DOI: 10.3535/25l-c5s-dq5
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ec3-je9-l7s
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m19-0bn-sxb
title: Merluccius

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/22h-a1a-v39
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g6h-x4g-p6y
title: Aves

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g82-4ht-dqh
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xfm-zh8-pgw
title: Raja

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4nz-89e-gtr
title: Cidaris Leske, 1778

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5c2-g6a-g32
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zmv-5zc-9ns
title: †Pseudorbitoides trechmanni Douvillé, 1922

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fb7-06b-1jn
title: Bison C. H. Smith, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kcb-edd-d53
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5066/p1xsbigz
title: Data to support an updated range map for Plethodon shenandoah and evaluating support for multiple models of species occurrence (ver. 2.0, August 2025)

description: The Shenanadoah Salamander (Plethodon shenandoah) is an endangered salamander found only in the mountains of Shenandoah National Park. Field surveys of the salamander were conducted from 2007-2022 using daytime cover object surveys. In order to capture the totality of P. shendandoah’s range we sampled from low to high elevation across a broad geographic range. We created a spatial generalized additive model with aspect, latitude, longitude, and elevation and heat load index (HLI) to predict salamander occupancy and create a new range map based on our extended surveys. All spatial covariates were extracted from a 15m digital elevation model layer of Shenandoah National Park. Temperature and precipitaiton data were extracted at sampling locations from PRISM Climate Group datasets. We also used these data to evaluate support for multiple hypotheses of species occurrence and evaluated the ability of models to predict field observations over time.
 
First release: 2024
Revised: August 2025 (ver. 2.0)
DOI: 10.3535/c9d-qxf-fk9
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zfn-lst-q9n
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6qa-n14-hyz
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/90h-hkt-3tw
title: Operculina d'Orbigny, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lvt-mf8-qme
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2ez-tdz-m6e
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7ah-47b-wef
title: Equus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cb2-mtl-e8h
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zpn-d6y-zxf
title: Cervus elaphus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/aps-n4l-z9h
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hqq-74a-sz2
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ttv-3vg-f6c
title: Paraspiticeras

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nrg-mqx-2vh
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fb6-z4t-kl6
title: †Sulcoperculina Thalmann, 1939

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hps-x9e-0ld
title: †Hornera striata Milne Edwards, 1838

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fb3-glz-cle
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jjp-zs1-scr
title: †Pseudorbitoides israelskii Vaughan & Cole, 1932

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.bw3m9s
title: Occurrence Download

description: A dataset containing 1149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Euphorbia lamarckii Sweet)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1149 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076715-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uz7258
title: Occurrence Download

description: A dataset containing 1715 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Biomphalaria straminea (Dunker, 1848)"
 ]
}

 The dataset includes 1715 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076716-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11866386
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Ysabel Wright, http://www.wikidata.org/entity/Q5561541. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q5561541
DOI: 10.5281/zenodo.11866385
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Ysabel Wright, http://www.wikidata.org/entity/Q5561541. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q5561541
DOI: 10.6084/m9.figshare.26046478
title: Supplemental materials for preprint: Better than flipping a coin? Organ specific plasma proteins are not confidently identified by gene expression data

description: Supplemental Information forOrgan specific proteins are not confidently identified by gene expression dataBenjamin OrsburnSummary of these materialsSupplemental 1 "Oh et al., Organ Specific"Oh et al., list of organ specific targetsOrgan aging signatures in the plasma proteome track health and diseasehttps://www.nature.com/articles/s41586-023-06802-1Supplemental 2 "15,210 proteins in 29 organs"A table of 15,210 proteins from Wang et al.,A deep proteome and transcriptome abundance atlas of 29 healthy human tissueshttps://www.embopress.org/doi/full/10.15252/msb.20188503Supplemental 3 "How to spotcheck proteins"A short walkthrough and some example results of how to spotcheck proteins against http://www.humanproteomemap.org/As detailed in Kim et al. A draft map of the human proteome. 2014. Nature. 509, 575-581Supplemental 4 "Combined Analysis"Targets between Oh et al., and Wang et al., that can be directly matched.To perform this analysis, I used the Excel "XLOOKUP" function to pull the proteins and their abundance from Sheet 2 which were listed as organ specific in Sheet 1The resulting proteins were then sorted by GTEX organ as in sheet 1Two analyses were performed on the 460 proteins that could be matched at a protein and organ level.Analysis 1: Repeat of Oh et al., assumption.Is the protein 4x or more abundant in the organ in question compared to the other 15 organs where we have overlap?This was performed by a simple IF, THEN argument (Results in Column AP, with final sums in AP681 and AP682Analysis 2:Is the abundance of this protein expression higher than the sum of the abundance of this protein in the other 15 organs where we have overlap?This was again a simple IF, THEN argumentResults are in Column AK, with final sums in AK681 and AK682
DOI: 10.6084/m9.figshare.26046478.v1
title: Supplemental materials for preprint: Better than flipping a coin? Organ specific plasma proteins are not confidently identified by gene expression data

description: Supplemental Information forOrgan specific proteins are not confidently identified by gene expression dataBenjamin OrsburnSummary of these materialsSupplemental 1 "Oh et al., Organ Specific"Oh et al., list of organ specific targetsOrgan aging signatures in the plasma proteome track health and diseasehttps://www.nature.com/articles/s41586-023-06802-1Supplemental 2 "15,210 proteins in 29 organs"A table of 15,210 proteins from Wang et al.,A deep proteome and transcriptome abundance atlas of 29 healthy human tissueshttps://www.embopress.org/doi/full/10.15252/msb.20188503Supplemental 3 "How to spotcheck proteins"A short walkthrough and some example results of how to spotcheck proteins against http://www.humanproteomemap.org/As detailed in Kim et al. A draft map of the human proteome. 2014. Nature. 509, 575-581Supplemental 4 "Combined Analysis"Targets between Oh et al., and Wang et al., that can be directly matched.To perform this analysis, I used the Excel "XLOOKUP" function to pull the proteins and their abundance from Sheet 2 which were listed as organ specific in Sheet 1The resulting proteins were then sorted by GTEX organ as in sheet 1Two analyses were performed on the 460 proteins that could be matched at a protein and organ level.Analysis 1: Repeat of Oh et al., assumption.Is the protein 4x or more abundant in the organ in question compared to the other 15 organs where we have overlap?This was performed by a simple IF, THEN argument (Results in Column AP, with final sums in AP681 and AP682Analysis 2:Is the abundance of this protein expression higher than the sum of the abundance of this protein in the other 15 organs where we have overlap?This was again a simple IF, THEN argumentResults are in Column AK, with final sums in AK681 and AK682
DOI: 10.15468/dl.vtkspa
title: Occurrence Download

description: A dataset containing 1603 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus maximartinezii Rzed."
 ]
}

 The dataset includes 1603 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076719-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9t25hk
title: Occurrence Download

description: A dataset containing 7184 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pomacea canaliculata (Lamarck, 1822)"
 ]
}

 The dataset includes 7184 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076720-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6q9rxu
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-15.02007 35.19878,7.17576 35.19878,7.17576 44.07331,-15.02007 44.07331,-15.02007 35.19878))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Marchantia polymorpha subsp. ruderalis Bischl. & Boissel.-Dub."
 ]
}

 The dataset includes 70 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076722-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8fzhcd
title: Occurrence Download

description: A dataset containing 466 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stenophysa marmorata (Guilding, 1828)"
 ]
}

 The dataset includes 466 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076721-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sykcp5
title: Occurrence Download

description: A dataset containing 522 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Drepanotrema cimex (Moricand, 1838)"
 ]
}

 The dataset includes 522 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076723-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9f2wym
title: Occurrence Download

description: A dataset containing 457 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Drepanotrema depressissimum (Moricand, 1839)"
 ]
}

 The dataset includes 457 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076724-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.