cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14814182
title: A JWST Panchromatic Thermal Emission Spectrum of the Warm Neptune Archetype GJ 436b

description: Data Analysis Products

The folder named "Eureka_data_reduction_products" contains Eureka! Control Files (.ecf files) and Eureka! Parameter Files (.epf files) used for the Eureka! reduction of the JWST NIRCam and MIRI eclipse observations of GJ 436 b as presented in Mukherjee et al. 2025 (ApJL).

Our Eureka! NIRCam reductions used version 0.11.dev446+gf5d684ee.d20240712 of Eureka!, version 1.15.1 of the jwst package, and CRDS version 11.17.26 with CRDS context jwst_1253.pmap. Our Eureka! MIRI/LRS reduction used Eureka! version 0.11.dev77+g1e43198f.d20240130, jwst version 1.13.4, CRDS version 11.17.15, and with CRDS context jwst_1188.pmap.

This folder also contains the spectrum derived for the planet from each individual visit and the weighted spectrum used for the modeling analysis in the paper.

 

In the "tshirt_data_reduction_products." directory, we have included averaged NIRCam and MIRI combined spectra, individual eclipses and spectroscopic lightcurves (as well as lightcurve models) of GJ 436 b for 8 eclipses. We also include the posterior distributions (mean and standard deviation) for the MIRI broadband lightcurve fits from the "Eureka!" reduction.  See the README.txt for a listing of the files and description of the column names and FITS extensions. The methodology and version numbers are further described in Mukherjee et al. 2025 (ApJL).

 

The folder named "stellar_spectrum" contains the flux calibrated stellar spectrum of host star GJ 436 observed with the NIRCam and MIRI instruments. It also contains the best-fitting BOSZ model used in our analysis.

 

Model Analysis Products

 

The folder "RCTE_grid" contains PICASO radiative-convective thermochemical equilibrium models used in the modeling analysis of GJ 436b. This folder contains files with the T(P) and chemical profiles computed for the planet. The spectrum computed from these models are in "spectra_RCTE" folder. Each file has the planet flux in erg/s/cm^3 in the first column, the Fp/Fs in the second and third column.

 

The folder "photochemistry_grid" contains the 1D photochemical models used in the modeling analysis of GJ 436b. This folder contains files with the T(P) and chemical profiles computed for the planet. The spectrum computed from these models are in "spectra_photochem" folder. Each file has the planet flux in erg/s/cm^3 in the first column, the Fp/Fs in the second and third column.

 

The spectrum computed from the VIRGA and PICASO cloudy models are in "spectra_cloudy" folder. Each file has the planet flux in erg/s/cm^3 in the first column, the Fp/Fs in the second and third column.
DOI: 10.5281/zenodo.14814183
title: A JWST Panchromatic Thermal Emission Spectrum of the Warm Neptune Archetype GJ 436b

description: Data Analysis Products

The folder named "Eureka_data_reduction_products" contains Eureka! Control Files (.ecf files) and Eureka! Parameter Files (.epf files) used for the Eureka! reduction of the JWST NIRCam and MIRI eclipse observations of GJ 436 b as presented in Mukherjee et al. 2025 (ApJL).

Our Eureka! NIRCam reductions used version 0.11.dev446+gf5d684ee.d20240712 of Eureka!, version 1.15.1 of the jwst package, and CRDS version 11.17.26 with CRDS context jwst_1253.pmap. Our Eureka! MIRI/LRS reduction used Eureka! version 0.11.dev77+g1e43198f.d20240130, jwst version 1.13.4, CRDS version 11.17.15, and with CRDS context jwst_1188.pmap.

This folder also contains the spectrum derived for the planet from each individual visit and the weighted spectrum used for the modeling analysis in the paper.

 

In the "tshirt_data_reduction_products." directory, we have included averaged NIRCam and MIRI combined spectra, individual eclipses and spectroscopic lightcurves (as well as lightcurve models) of GJ 436 b for 8 eclipses. We also include the posterior distributions (mean and standard deviation) for the MIRI broadband lightcurve fits from the "Eureka!" reduction.  See the README.txt for a listing of the files and description of the column names and FITS extensions. The methodology and version numbers are further described in Mukherjee et al. 2025 (ApJL).

 

The folder named "stellar_spectrum" contains the flux calibrated stellar spectrum of host star GJ 436 observed with the NIRCam and MIRI instruments. It also contains the best-fitting BOSZ model used in our analysis.

 

Model Analysis Products

 

The folder "RCTE_grid" contains PICASO radiative-convective thermochemical equilibrium models used in the modeling analysis of GJ 436b. This folder contains files with the T(P) and chemical profiles computed for the planet. The spectrum computed from these models are in "spectra_RCTE" folder. Each file has the planet flux in erg/s/cm^3 in the first column, the Fp/Fs in the second and third column.

 

The folder "photochemistry_grid" contains the 1D photochemical models used in the modeling analysis of GJ 436b. This folder contains files with the T(P) and chemical profiles computed for the planet. The spectrum computed from these models are in "spectra_photochem" folder. Each file has the planet flux in erg/s/cm^3 in the first column, the Fp/Fs in the second and third column.

 

The spectrum computed from the VIRGA and PICASO cloudy models are in "spectra_cloudy" folder. Each file has the planet flux in erg/s/cm^3 in the first column, the Fp/Fs in the second and third column.
DOI: 10.34740/kaggle/dsv/10736234
title: BOS Kemdikbud
DOI: 10.15468/dl.cxgtdt
title: Occurrence Download

description: A dataset containing 192 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Pseudacris sierra (Jameson, Mackey & Richmond, 1966))"
 ]
}

 The dataset includes 192 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000758-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a49d4u
title: Occurrence Download

description: A dataset containing 188 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ceratopteris pteridoides (Hook.) Hieron."
 ]
}

 The dataset includes 188 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000759-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nkdy54
title: Occurrence Download

description: A dataset containing 1556 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Pseudacris streckeri Wright & Wright, 1933)"
 ]
}

 The dataset includes 1556 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000760-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kmemny
title: Occurrence Download

description: A dataset containing 7766 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Pseudacris triseriata (Wied-Neuwied, 1838))"
 ]
}

 The dataset includes 7766 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000761-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14861555
title: Oxyrhopus in Bahia, Brazil: Pholidosis, Maturity, Sexual Dimorphism, and Reproduction-dataset
DOI: 10.5281/zenodo.14861556
title: Oxyrhopus in Bahia, Brazil: Pholidosis, Maturity, Sexual Dimorphism, and Reproduction-dataset
DOI: 10.15468/dl.masx8u
title: Occurrence Download

description: A dataset containing 508 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Pseudobranchus axanthus Netting & Goin, 1942)"
 ]
}

 The dataset includes 508 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000762-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zg589y
title: Occurrence Download

description: A dataset containing 496072 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Geometry POLYGON((-90.29 38.08,-75 38.08,-75 42.21,-90.29 42.21,-90.29 38.08))",
 "HasCoordinate is true",
 "License is one of (CC0 1.0, CC-BY-NC 4.0, CC-BY 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Fungi"
 ]
}

 The dataset includes 496072 records from 162 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000751-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uvc2qj
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Pseudobranchus axanthus axanthus)"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000765-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zg2wc8
title: Occurrence Download

description: A dataset containing 193 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bromus tectorum var. glabratus Spenn."
 ]
}

 The dataset includes 193 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000763-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ag5t5m
title: Occurrence Download

description: A dataset containing 525 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dipteryx oleifera Benth."
 ]
}

 The dataset includes 525 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000764-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/bf8e52787a3576284b6046c89c75a0db
title: Monitoring of nutrient and sulfide concentrations in porewaters of mangrove forests from the Shark River Slough and Taylor Slough, Everglades National Park (FCE LTER), Florida, USA, December 2000 - ongoing

description: To monitor soil chemistry in the mangrove sites SRS4, SRS5, SRS6, and SRS7, and TS/Ph6b, TS/Ph7b and TS/Ph8, porewater concentrations of sulfide, PO4, NH4, NO2 and NO3 have been analyzed.
 See also related porewater-physical-characteristics data package knb-lter-fce.1169 (https://portal.edirepository.org/nis/mapbrowse?scope=knb-lter-fce&identifier=1169).
DOI: 10.15468/dl.ar6qzz
title: Occurrence Download

description: A dataset containing 3092 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Plethodon hoffmani Highton, 1972)"
 ]
}

 The dataset includes 3092 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000766-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gu7m27
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Pseudobranchus axanthus belli Schwartz, 1952)"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000767-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vyr6xs
title: Occurrence Download

description: A dataset containing 591 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Geometry POLYGON((-90.29 38.08,-75 38.08,-75 42.21,-90.29 42.21,-90.29 38.08))",
 "HasCoordinate is true",
 "License is one of (CC0 1.0, CC-BY-NC 4.0, CC-BY 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Ochrophyta"
 ]
}

 The dataset includes 591 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000768-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14861356
title: Network Inversion Filter with Mogi source

description: “filsanMOGI” is an NIF program developed by Shinzaburo Ozawa, which can handle Mogi source without randome walk.

Calculation of Log-likelihood was modified from Ozawa et al. (2023).
DOI: 10.5281/zenodo.14861357
title: Network Inversion Filter with Mogi source

description: “filsanMOGI” is an NIF program developed by Shinzaburo Ozawa, which can handle Mogi source without randome walk.

Calculation of Log-likelihood was modified from Ozawa et al. (2023).
DOI: 10.15468/dl.r58r69
title: Occurrence Download

description: A dataset containing 1061 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Pseudobranchus striatus (LeConte, 1824))"
 ]
}

 The dataset includes 1061 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000770-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e9vzsw
title: Occurrence Download

description: A dataset containing 37716 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bromus racemosus L."
 ]
}

 The dataset includes 37716 records from 903 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000769-250212154643175/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zcai0p
title: Occurrence Download

description: A dataset containing 5930 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dugong dugon (Müller, 1776)"
 ]
}

 The dataset includes 5930 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013533-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.o7nswv
title: Occurrence Download

description: A dataset containing 4696 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ledebouria Roth"
 ]
}

 The dataset includes 4696 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011291-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x3uv64
title: Occurrence Download

description: A dataset containing 694 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 {
 "or" : [
 "Country is United States of America",
 "Country is Canada"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Rhinotermitidae",
 "Year 2008-2021"
 ]
}

 The dataset includes 694 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072429-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.guvoqe
title: Occurrence Download

description: A dataset containing 735 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plethodon kentucki Mittleman, 1951"
 ]
}

 The dataset includes 735 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013533-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25318/1710015501-fra
title: Estimations de la population, 1er juillet, selon la subdivision de recensement, limites de 2021

description: Estimations annuelles de la population totale au 1er juillet, selon la subdivision de recensement, basées sur la Classification géographique type (CGT) 2021.
DOI: 10.15468/dl.kkz9i1
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crateva urbaniana R.Rankin"
 ]
}

 The dataset includes 9 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011291-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w2wc39
title: Occurrence Download

description: A dataset containing 200 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carex geyeri Boott",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 200 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023091-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gtgryc
title: Occurrence Download

description: A dataset containing 640 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "HasCoordinate is true",
 "TaxonKey is Pedicularis L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 640 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011291-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bu6drb
title: Occurrence Download

description: A dataset containing 9347 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Helostoma temminkii Cuvier, 1829",
 "TaxonKey is Hemaris tityus Linnaeus, 1758",
 "TaxonKey is Hemarthria altissima (Poir.) Stapf & C.E.Hubb.",
 "TaxonKey is Hemerocallis fulva (L.) L."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9347 records from 246 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013537-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.884z7d
title: Occurrence Download

description: A dataset containing 743 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Collinsia parviflora Douglas ex Lindl.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 743 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023096-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.532znv
title: Occurrence Download

description: A dataset containing 609633 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cryptandra parvifolia (Hook.) Hook.fil., Pleione formosana Hayata, Paphiopedilum delenatii Guillaumin, Veratrum maackii Regel, Scurrula notothixoides (Hance) Danser, Tsuga sieboldii Carrière, Tsuga diversifolia (Maxim.) Mast., Fagus crenata Blume, Eriachne triseta Nees ex Steud., Plumbago auriculata Lam., Nymphaea lotus L., Stegnosperma halimifolium Benth., Dysphania botrys (L.) Mosyakin & Clemants, Rosa banksiae R.Br. ex Aiton, Euphorbia tirucalli L., Pyracantha fortuneana (Maxim.) H.L.Li, Polyalthia suaveolens Engl. & Diels, Clinacanthus nutans (Burm.fil.) Lindau, Diospyros maclurei Merr., Diospyros hainanensis Merr., Allium xichuanense J.M.Xu, Allium rude J.M.Xu, Allium maowenense J.M.Xu, Allium herderianum Regel, Allium chrysocephalum Regel, Allium chrysanthum Regel, Magnolia zenii W.C.Cheng, Ulva flexuosa Wulfen, Ulva linza L., Magnolia sieboldii K.Koch, Cenchrus ciliaris L., Azara serrata Ruiz & Pav., Uvaria littoralis (Blume) Blume, Moringa oleifera Lam., Reevesia thyrsoidea Lindl., Sarcandra glabra (Thunb.) Nakai, Calotropis procera (Aiton) W.T.Aiton, Calotropis gigantea (L.) W.T.Aiton, Pemphis acidula J.R.Forst. & G.Forst., Firmiana simplex (L.) W.Wight, Fagus sylvatica L., Menyanthes trifoliata L., Nymphoides coronata (Dunn) Chun ex Y.D.Zhou & G.W.Hu, Nymphoides crenata (F.Muell.) Kuntze, Nymphoides hydrophylla (Lour.) Kuntze, Nymphoides coreana (H.Lév.) H.Hara, Nymphoides simulans Aston, Pteris vittata L., Ceratopteris cornuta (P.Beauv.) Le Prieur, Nyssa bifida Craib)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 609633 records from 1268 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013534-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.575u3e
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is USA.3.8_1",
 "Month is one of (June, July, August, September)",
 "TaxonKey is Amsinckia Lehm.",
 "Year 2012-2025"
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009175-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uzgwv4
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hoplitis uvulalis (Cockerell, 1902)"
 ]
}

 The dataset includes 64 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009202-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.