cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.4217247
title: Cluster evolution and urban industrial dynamics in the transition from a planned to a socialist market economy: the case of Beijing

description: Cluster evolution and urban industrial dynamics in the transition from a planned to a socialist market economy: the case of Beijing. <i>Spatial Economic Analysis</i>. The transformation of the industrial structure of Beijing in the transition from a planned to a socialist market economy integrated into global markets is examined through the lens of cluster evolutions and life cycles in 1987–2007. Cluster emergence, decomposition, stabilization, upgrading, restructuring and disappearance are identified using exploratory factor analysis of input–output tables. These evolutions are interpreted in the light of the way in which backward and forward linkages provide channels of communication, new intermediate goods, new divisions of labour and new patterns of co-location, and are related to the changing industrial geography of Beijing.
DOI: 10.6084/m9.figshare.4217247.v1
title: Cluster evolution and urban industrial dynamics in the transition from a planned to a socialist market economy: the case of Beijing

description: Cluster evolution and urban industrial dynamics in the transition from a planned to a socialist market economy: the case of Beijing. <i>Spatial Economic Analysis</i>. The transformation of the industrial structure of Beijing in the transition from a planned to a socialist market economy integrated into global markets is examined through the lens of cluster evolutions and life cycles in 1987–2007. Cluster emergence, decomposition, stabilization, upgrading, restructuring and disappearance are identified using exploratory factor analysis of input–output tables. These evolutions are interpreted in the light of the way in which backward and forward linkages provide channels of communication, new intermediate goods, new divisions of labour and new patterns of co-location, and are related to the changing industrial geography of Beijing.
DOI: 10.6084/m9.figshare.4217019
title: Statistical approaches in surface finishing. Part 1. Introductory review and parametric hypothesis testing

description: This paper is the first of a short series of articles aimed towards describing some of the various statistical methods and approaches that have been used in surface finishing. The methods fall broadly into two areas: analysis and design-of-experiments. This article introduces the subject, briefly reviewing the wide use of a number of experimental design tools in recent surface finishing research before starting with a discussion of parametric hypothesis testing, the simplest of the statistical methods.
DOI: 10.6084/m9.figshare.4217019.v1
title: Statistical approaches in surface finishing. Part 1. Introductory review and parametric hypothesis testing

description: This paper is the first of a short series of articles aimed towards describing some of the various statistical methods and approaches that have been used in surface finishing. The methods fall broadly into two areas: analysis and design-of-experiments. This article introduces the subject, briefly reviewing the wide use of a number of experimental design tools in recent surface finishing research before starting with a discussion of parametric hypothesis testing, the simplest of the statistical methods.
DOI: 10.6084/m9.figshare.4216881
title: MultiPic

description: The compressed files with the format Language_Multipic.zip correspond to the CSV, XLS and TXT files with the critical pieces of <b>information</b> for each language. These are the files that researchers will find most useful together with the pictures.<br>The <b>images</b> are available in multiple formats, including TIFF, JPG and PNG. PNG files are presented in color and greyscale. All the files containing the pictures are compressed.<br><br>This Microsoft Excel file contains the core worksheet containing the final set of filtered data corresponding to the MultiPic collaborative dataset (worksheet entitled 'FINAL DATA PER LANGUAGE'), together with the original unfiltered raw data including 'don't know' responses as well as idiosyncratic responses (worksheet 'RAW UNFILTERED DATA'), and with the correctness subjective classification carried out for each response in each language (worksheet 'FILTERED DATA WITH CORRECTNESS').<br>For the full reference and additional details, please refer to:<b>Duñabeitia, J.A., Crepaldi, D., Meyer, A.S., New, B., Pliatsikas, C., Smolka, E., & Brysbaert, M. (2018). MultiPic: A standardized set of 750 drawings with norms for six European languages. Quarterly Journal of Experimental Psychology, 71(4), 808-816.</b><br>
DOI: 10.17045/sthlmuni.4216869
title: VCF files for Capsella grandiflora populations

description: The folders contain two VCF files based on whole genome resequencing of Capsella grandiflora and produced with GATK. Each file correspond either to scattered samples throughout the species range or 21 individuals from population Cg89. Variants in the files have been filtered for quality, coverage and missing data (see manuscript for more info).<br>Those files have been used for population genomics analyses in Steige et al. 2017 PNAS.
DOI: 10.17045/sthlmuni.4216869.v1
title: VCF files for Capsella grandiflora populations

description: The folders contain two VCF files based on whole genome resequencing of Capsella grandiflora and produced with GATK. Each file correspond either to scattered samples throughout the species range or 21 individuals from population Cg89. Variants in the files have been filtered for quality, coverage and missing data (see manuscript for more info).<br>Those files have been used for population genomics analyses in Steige et al. 2017 PNAS.
DOI: 10.6084/m9.figshare.4216812
title: Acute toxicity of copper oxide nanoparticles to <i>Daphnia magna</i> under different test conditions

description: The acute toxicity of monodispersed 6 nm and &lt;100 nm poly-dispersed copper oxide nanoparticles toward <i>Daphnia magna</i> was assessed using 48 h immobilization tests. CuSO<sub>4</sub> was used as a reference. Four different exposure conditions were tested, to study whether the toxicity of the nanoparticle suspensions changed in a way similar to what is known for dissolved Cu: first in ISO standard test conditions (pH 7.8), second with slight acidity (pH 6.5), third in the presence of citric acid, and fourth in the presence of humic acid. For all four exposure conditions, the toxicity of Cu employed in the three forms followed the same sequence, i.e., CuSO<sub>4</sub> &gt; monodispersed 6 nm CuO ≫ poly-dispersed CuO. The toxicity of all Cu forms decreased from pH 6.5, ≫ pH 7.8, &gt; pH 7.8 + citric acid, to ≫ pH 7.8 + humic acid. This pattern is in agreement with concentrations of Cu<sup>2+</sup> calculated using the equilibrium model MINTEQ. These findings show that the acute toxicity of copper oxide nanoparticles is governed by test water composition and the chemical species Cu<sup>2+</sup>.
DOI: 10.6084/m9.figshare.4216812.v1
title: Acute toxicity of copper oxide nanoparticles to <i>Daphnia magna</i> under different test conditions

description: The acute toxicity of monodispersed 6 nm and &lt;100 nm poly-dispersed copper oxide nanoparticles toward <i>Daphnia magna</i> was assessed using 48 h immobilization tests. CuSO<sub>4</sub> was used as a reference. Four different exposure conditions were tested, to study whether the toxicity of the nanoparticle suspensions changed in a way similar to what is known for dissolved Cu: first in ISO standard test conditions (pH 7.8), second with slight acidity (pH 6.5), third in the presence of citric acid, and fourth in the presence of humic acid. For all four exposure conditions, the toxicity of Cu employed in the three forms followed the same sequence, i.e., CuSO<sub>4</sub> &gt; monodispersed 6 nm CuO ≫ poly-dispersed CuO. The toxicity of all Cu forms decreased from pH 6.5, ≫ pH 7.8, &gt; pH 7.8 + citric acid, to ≫ pH 7.8 + humic acid. This pattern is in agreement with concentrations of Cu<sup>2+</sup> calculated using the equilibrium model MINTEQ. These findings show that the acute toxicity of copper oxide nanoparticles is governed by test water composition and the chemical species Cu<sup>2+</sup>.
DOI: 10.6084/m9.figshare.4216521
title: Primary Spontaneous Pneumothorax Microarray Study

description: Global gene expression of patients with primary spontaneous pneumothorax<br>
DOI: 10.6084/m9.figshare.4216809
title: Source files figures Hoekzema et al.

description: Source files for the figures of Hoekzema et al.<br>
DOI: 10.6084/m9.figshare.4216506
title: New palaeothentid marsupials (Paucituberculata) from the middle Miocene of Quebrada Honda, Bolivia, and their implications for the palaeoecology, decline and extinction of the Palaeothentoidea

description: Paucituberculatan marsupials, particularly members of the family Palaeothentidae, were important components of South American mammal communities during much of the Cenozoic. However, after the late early Miocene, palaeothentid remains are rare in the fossil record, and the group is last recorded at late middle Miocene sites in Colombia, Bolivia and possibly Argentina. Here, we describe new specimens of palaeothentids from one of these late middle Miocene sites, Quebrada Honda, Bolivia, which include: (1) the first described lower dentitions of <i>Acdestis maddeni</i>, which exhibit distinctive features such as a greatly elongated paracristid and a single-rooted m4; (2) the first described late middle Miocene palaeothentines, representing two new species of <i>Palaeothentes</i>, <i>P. serratus</i> sp. nov. and <i>P. relictus</i> sp. nov., distinguished from other species of <i>Palaeothentes</i> by the presence of an anterobasal cingulid and reduced anterior trigonid crest, among other features; and (3) remains of a third new species, <i>Chimeralestes ambiguus</i> gen. et sp. nov., distinguished from other palaeothentids by its combination of a labially positioned cristid obliqua, reduced m4, and sharply curved entocristid. Phylogenetic and palaeoecological analyses show that Quebrada Honda palaeothentids were taxonomically and morphologically diverse and likely spanned a wide range of ecological niches. Combined with the wide geographical distribution of palaeothentoids during the late middle Miocene, this suggests that the disappearance of these marsupials was preceded by an abrupt rather than gradual decline in taxonomic and ecological diversity as well as geographical range. http://zoobank.org/urn:lsid:zoobank.org:pub:DA7E10BA-7203-4F5A-A3AB-F0E7352B101C
DOI: 10.6084/m9.figshare.4216503
title: SNP calling result of 24 chickens on four chromosomes

description: PLINK binary files containing genotype and map information of all variants on chromosomes (chr1, chr3, chr6, and chr28) detected by GATK in the 24 sequenced individuals
DOI: 10.6084/m9.figshare.4216503.v2
title: SNP calling result of 24 chickens on four chromosomes

description: PLINK binary files containing genotype and map information of all variants on chromosomes (chr1, chr3, chr6, and chr28) detected by GATK in the 24 sequenced individuals
DOI: 10.6084/m9.figshare.4216503.v1
title: chr1_3_6_28.zip

description: PLINK binary files containing genotype and map information of all variants on chromosomes (chr1, chr3, chr6, and chr28) detected by GATK in the 24 sequenced individuals
DOI: 10.6084/m9.figshare.4216452
title: How well do bird atlas reporting rates reflect bird densities? Correlates of detection from the Fynbos biome, South Africa, with applications for population estimation

description: Relationships between true population densities and reporting indices from atlas data are important for the calculation of population sizes, though these relationships are remarkably little-known and likely confounded by issues of detection. We examine issues of detection for a single-observer point-count survey across the Fynbos biome in South Africa. We created an index of relative abundance comparable to atlas reporting rate and calculated detection coefficients for each species. We explore various models that explain relative abundance as a function of detection covariates, e.g. mass, colour, group size, vocal behaviour and density. Density was consistently included across models and the best predictor when used alone in a validation exercise. We then calculated mean reporting rates for the citizen science South African Bird Atlas Project2 (SABAP2). A model of species’ reporting rates as determined by density for this set of birds suggested the correlation between atlas reporting rates and density estimates was weak, with species capable of using modified habitats exhibiting higher reporting rates than expected from the density estimates. There was a positive correlation between bird density and reporting rates corrected for by species mass. We used this relationship to calculate densities for the Fynbos bird species and compare results to published data.
DOI: 10.6084/m9.figshare.4216452.v1
title: How well do bird atlas reporting rates reflect bird densities? Correlates of detection from the Fynbos biome, South Africa, with applications for population estimation

description: Relationships between true population densities and reporting indices from atlas data are important for the calculation of population sizes, though these relationships are remarkably little-known and likely confounded by issues of detection. We examine issues of detection for a single-observer point-count survey across the Fynbos biome in South Africa. We created an index of relative abundance comparable to atlas reporting rate and calculated detection coefficients for each species. We explore various models that explain relative abundance as a function of detection covariates, e.g. mass, colour, group size, vocal behaviour and density. Density was consistently included across models and the best predictor when used alone in a validation exercise. We then calculated mean reporting rates for the citizen science South African Bird Atlas Project2 (SABAP2). A model of species’ reporting rates as determined by density for this set of birds suggested the correlation between atlas reporting rates and density estimates was weak, with species capable of using modified habitats exhibiting higher reporting rates than expected from the density estimates. There was a positive correlation between bird density and reporting rates corrected for by species mass. We used this relationship to calculate densities for the Fynbos bird species and compare results to published data.
DOI: 10.6084/m9.figshare.4216401
title: Dataset for: FUNCTIONAL RESPIRATORY IMAGING, REGIONAL STRAIN AND EXPIRATORY TIME CONSTANTS AT THREE LEVELS OF POSITIVE END EXPIRATORY PRESSURE IN AN EX-VIVO PIG MODEL

description: Heterogeneity in regional end expiratory lung volume (EELV) may lead to variations in regional strain (ε). High ε levels have been associated with ventilator associated lung injury (VALI). While both whole lung and regional EELV may be affected by changes in positive end-expiratory pressure (PEEP), regional variations are not revealed by conventional respiratory system measurements. Differential rates of deflation of adjacent lung units due to regional variation in expiratory time constants (τE) may create localized regions of ε that are significantly greater than implied by whole lung measures. We used functional respiratory imaging (FRI) in an ex-vivo porcine lung model to: i) demonstrate that CT based imaging studies can be used to assess global and regional values of ε and τE and, ii) demonstrate that the manipulation of PEEP will cause measurable changes in total and regional ε and τE values. Our study provides three insights into lung mechanics. First, image based measurements reveal regional variation that cannot be detected by traditional methods such as spirometry. Second, the manipulation of PEEP causes global and regional changes in R, E, ε and τE values. Finally, regional ε and τE were correlated in several lobes, suggesting the possibility that regional τE could be used as a surrogate marker for regional ε.
DOI: 10.6084/m9.figshare.4216401.v1
title: Dataset for: FUNCTIONAL RESPIRATORY IMAGING, REGIONAL STRAIN AND EXPIRATORY TIME CONSTANTS AT THREE LEVELS OF POSITIVE END EXPIRATORY PRESSURE IN AN EX-VIVO PIG MODEL

description: Heterogeneity in regional end expiratory lung volume (EELV) may lead to variations in regional strain (ε). High ε levels have been associated with ventilator associated lung injury (VALI). While both whole lung and regional EELV may be affected by changes in positive end-expiratory pressure (PEEP), regional variations are not revealed by conventional respiratory system measurements. Differential rates of deflation of adjacent lung units due to regional variation in expiratory time constants (τE) may create localized regions of ε that are significantly greater than implied by whole lung measures. We used functional respiratory imaging (FRI) in an ex-vivo porcine lung model to: i) demonstrate that CT based imaging studies can be used to assess global and regional values of ε and τE and, ii) demonstrate that the manipulation of PEEP will cause measurable changes in total and regional ε and τE values. Our study provides three insights into lung mechanics. First, image based measurements reveal regional variation that cannot be detected by traditional methods such as spirometry. Second, the manipulation of PEEP causes global and regional changes in R, E, ε and τE values. Finally, regional ε and τE were correlated in several lobes, suggesting the possibility that regional τE could be used as a surrogate marker for regional ε.
DOI: 10.6084/m9.figshare.4216356
title: Extent of Occurrence and Area of Occupancy of Psylocarpus goiasensis

description: Kml file for conservation status assessment of <i>Psyllocarpus goiasensis</i> J.H.Kirkbr.
DOI: 10.6084/m9.figshare.4216362
title: Neurons derived from patients with bipolar disorder divide into intrinsically different sub-populations of neurons, predicting the patients’ responsiveness to lithium

description: Data for Molecular Psychiatry paper
DOI: 10.6084/m9.figshare.4216356.v1
title: Extent of Occurrence and Area of Occupancy of Psylocarpus goiasensis

description: Kml file for conservation status assessment of <i>Psyllocarpus goiasensis</i> J.H.Kirkbr.
DOI: 10.6084/m9.figshare.4216314
title: IMa2 Input and Output

description: Input and Output of IMa2 runs
DOI: 10.6084/m9.figshare.4216311
title: nDNA genotypes

description: nDNA genotypes in GENEPOP format
DOI: 10.6084/m9.figshare.4216311.v1
title: nDNA genotypes

description: nDNA genotypes in GENEPOP format
DOI: 10.6084/m9.figshare.4216308
title: mtDNA aligmnets

description: Concatenated mtDNA haplotypes in PHYLIP format
DOI: 10.6084/m9.figshare.4216305
title: Microsatellite data sets

description: Microsatellite genotypes in GENEPOP format
DOI: 10.6084/m9.figshare.4216308.v1
title: mtDNA aligmnets

description: Concatenated mtDNA haplotypes in PHYLIP format
DOI: 10.6084/m9.figshare.4216305.v1
title: Microsatellite data sets

description: Microsatellite genotypes in GENEPOP format
DOI: 10.6084/m9.figshare.4216188
title: Outcome of bioprosthetic valve replacement in dogs with tricuspid valve dysplasia.xls

description: Tricuspid valve replacement dataset for cases undergoing surgery at the RVC
DOI: 10.6084/m9.figshare.4216167
title: Collagen Fiber

description: Collagen fiber data example, code script
DOI: 10.6084/m9.figshare.4216167.v1
title: Collagen Fiber

description: Collagen fiber data example, code script
DOI: 10.6084/m9.figshare.4216188.v1
title: TVRcases.xls

description: Tricuspid valve replacement dataset for cases undergoing replacement at the RVC
DOI: 10.6084/m9.figshare.4216149
title: Repeatability study of replicate crash tests: A signal analysis approach

description: <b>Objective</b>: To provide an objective basis on which to evaluate the repeatability of vehicle crash test methods, a recently developed signal analysis method was used to evaluate correlation of sensor time history data between replicate vehicle crash tests. The goal of this study was to evaluate the repeatability of rollover crash tests performed with the Dynamic Rollover Test System (DRoTS) relative to other vehicle crash test methods. <b>Methods</b>: Test data from DRoTS tests, deceleration rollover sled (DRS) tests, frontal crash tests, frontal offset crash tests, small overlap crash tests, small overlap impact (SOI) crash tests, and oblique crash tests were obtained from the literature and publicly available databases (the NHTSA vehicle database and the Insurance Institute for Highway Safety TechData) to examine crash test repeatability. <b>Results</b>: Signal analysis of the DRoTS tests showed that force and deformation time histories had good to excellent repeatability, whereas vehicle kinematics showed only fair repeatability due to the vehicle mounting method for one pair of tests and slightly dissimilar mass properties (2.2%) in a second pair of tests. Relative to the DRS, the DRoTS tests showed very similar or higher levels of repeatability in nearly all vehicle kinematic data signals with the exception of global <i>X</i>′ (road direction of travel) velocity and displacement due to the functionality of the DRoTS fixture. Based on the average overall scoring metric of the dominant acceleration, DRoTS was found to be as repeatable as all other crash tests analyzed. Vertical force measures showed good repeatability and were on par with frontal crash barrier forces. Dynamic deformation measures showed good to excellent repeatability as opposed to poor repeatability seen in SOI and oblique deformation measures. <b>Conclusions</b>: Using the signal analysis method as outlined in this article, the DRoTS was shown to have the same or better repeatability of crash test methods used in government regulatory and consumer evaluation test protocols.
DOI: 10.6084/m9.figshare.4216152
title: Transport phenomena governing nicotine emissions from electronic cigarettes: Model formulation and experimental investigation

description: Electronic cigarettes (ECIGs) electrically heat and aerosolize a liquid-containing propylene glycol (PG), vegetable glycerin (VG), flavorants, water, and nicotine. ECIG effects and proposed methods to regulate them are controversial. One regulatory focal point involves nicotine emissions. We describe a mathematical model that predicts ECIG nicotine emissions. The model computes the vaporization rate of individual species by numerically solving the unsteady species and energy conservation equations. To validate model predictions, yields of nicotine, total particulate matter, PG, and VG were measured while manipulating puff topography, electrical power, and liquid composition across 100 conditions. Nicotine flux, the rate at which nicotine is emitted per unit time, was the primary outcome. Across conditions, the measured and computed nicotine flux were highly correlated (r = 0.85, <i>p</i> &lt; .0001). As predicted, device power, nicotine concentration, PG/VG ratio, and puff duration influenced nicotine flux (<i>p</i> &lt; .05), while water content and puff velocity did not. Additional empirical investigation revealed that PG/VG liquids act as ideal solutions, that liquid vaporization accounts for more than 95% of ECIG aerosol mass emissions, and that as device power increases the aerosol composition shifts towards the less volatile components of the parent liquid. To the extent that ECIG regulations focus on nicotine emissions, mathematical models like this one can be used to predict ECIG nicotine emissions and to test the effects of proposed regulation of factors that influence nicotine flux. Copyright © 2017 American Association for Aerosol Research