cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25585/1488044
title: Comparative viral community genome analysis in the Subarctic Pacific Ocean
DOI: 10.25585/1488045
title: Whole Genome Sequencing of the Colony Forming Green Microalga Botryococcus braunii var Showa
DOI: 10.25585/1488046
title: The moss Ceratodon purpureus
DOI: 10.25585/1488047
title: Surveying natural diversity of the model grass Brachypodium distachyon
DOI: 10.25585/1488048
title: Phylogenomics and the origin and diversification of Kingdom Fungi
DOI: 10.25585/1488049
title: Small Planktonic single celled eukaryotes from the Arctic Ocean
DOI: 10.25585/1488050
title: Exploring the Genome Diversity of Mycorrhizal Fungi to Understand the Evolution and Functioning of Symbiosis in Woody Shrubs and Trees
DOI: 10.25585/1488051
title: Linking mantle to microbe: a community-wide effort to ally hydrothermal vent microbial identity and ecology to geochemical cycles via metagenomics
DOI: 10.25585/1488052
title: Microbial Systems Ecology of Expanding Oxygen Minimum Zones in the Eastern Subtropical North Pacific Ocean
DOI: 10.25585/1488053
title: Sequencing of the three cultured partners of the lichen Lobaria pulmonaria and the sequencing of the transcriptomes from the natural tripartite lichen under selected and controlled conditions.
DOI: 10.25585/1488054
title: Sea of Change: Eukaryotic Phytoplankton Communities in the Arctic Ocean
DOI: 10.25585/1488055
title: Metatranscriptomics of Soil Forest Ecosystems
DOI: 10.25585/1488056
title: Plant associated metagenomes--Microbial community diversity and host control of community assembly across model and emerging plant ecological genomics systems.
DOI: 10.25585/1488057
title: Exploring the transcriptome of perennial grasses in association with beneficial microorganisms to increase biomass production and environmental sustainability of bioenergy production
DOI: 10.25585/1488058
title: Understanding terrestrial microbial biocomplexity in an Antarctic desert landscape: resolving universal drivers of community structure and function in a trophically simple system
DOI: 10.25585/1488059
title: Development of sequence-based community tools for Setaria viridis-a model genetic system for C4 grasses
DOI: 10.25585/1488060
title: Empowering functional plant genomics with genomes and transcriptomes of the top 20 Brassicales
DOI: 10.25585/1488061
title: 1000 Fungal Genomes
DOI: 10.25585/1488062
title: Understanding novel pathways for energy and carbon use in bacterial symbionts of gutless marine worms
DOI: 10.25585/1488063
title: A Phylogenomic Framework to Investigate Fungal Thermophily
DOI: 10.25585/1488064
title: Microbial Interactions in Extremophilic Mat Communities
DOI: 10.25585/1488065
title: The Agave Microbiome: Exploring the role of microbial communities in plant adaptations to desert environments
DOI: 10.25585/1488066
title: Expression profile of biomass-degrading fungi inhabiting the cow rumen
DOI: 10.25585/1488067
title: Genomic signatures of pathogenicity and endophytism in five species of grass-associated Colletotrichum impacting the health and production of bioenergy feedstocks, agriculture and the environment
DOI: 10.25585/1488068
title: Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project
DOI: 10.25585/1488069
title: Functional genomics of the saprotrophic-symbiotrophic fungus Rhizidium phycophilum and its algal partner Bracteacoccus sp.: increasing algal biomass through symbiosis
DOI: 10.25585/1488070
title: Metagenomic and biogeochemical characterization of marine ammonia-oxidizing archaeal communities in a coastal upwelling system
DOI: 10.25585/1488071
title: Mycorrhizal Genomics Initiative: Exploring the Symbiotic Transcriptomes
DOI: 10.25585/1488072
title: The Fungal Nutritional ENCODE project
DOI: 10.25585/1488073
title: The bacterial component of the microbial loop in the Laurentian Great Lakes and their role in the carbon cycle.
DOI: 10.25585/1488075
title: Enigmatic life underneath us: genomic analysis of deep subsurface microorganisms
DOI: 10.25585/1488076
title: COGITO (Coastal Microbe Genomic & Taxonomic Observatory)
DOI: 10.25585/1488077
title: Survey of lignocellulolytic capabilities over the order Polyporales (Fungi, Basidiomycetes)
DOI: 10.25585/1488078
title: Genome sequence of the inhibitor-tolerant Ascomycete Coniochaeta ligniaria NRRL30616
DOI: 10.25585/1488079
title: Resequencing diverse collections and mapping resources for Panicum hallii
DOI: 10.25585/1488080
title: Opening a single-cell genomic window on microbial ecotype selection in expanding marine oxygen minimum zones
DOI: 10.25585/1488081
title: Switchgrass resequencing to enhance biofuel production
DOI: 10.25585/1488082
title: Panicum virgatum RNA sequencing to identify gene expression changes related to biofuel traits
DOI: 10.25585/1488084
title: JGI Flagship Plant Gene Atlas
DOI: 10.25585/1488085
title: Genomic Encyclopedia of Type Strains, Phase III the genomes of soil and plant-associated and newly described type strains
DOI: 10.25585/1488086
title: RNA-seq-enabled Expression Quantitative Trait Locus (eQTL) in Populus
DOI: 10.25585/1488087
title: Harnessing epigenomic reprogramming to improve bioenergy trait performance
DOI: 10.25585/1488088
title: Use of a single cell type model, the root hair cell, to advance our understanding of the soybean and sorghum transcriptomic and epigenomic responses to various environmental stresses.
DOI: 10.25585/1488089
title: Global genomic consequences of the deletion of the Aspergilli non-homologous end joining DNA repair mechanism employed as a genetic tool world-wide
DOI: 10.25585/1488090
title: Microbial and viral regulation of community carbon cycling across diverse low-oxygen zones
DOI: 10.25585/1488091
title: Metagenomic Based Operons for Novel Alkane Production Pathways
DOI: 10.25585/1488092
title: Exploring the supernumerary chromosomes of the Fusarium solani and Fusarium oxysporum species complexes: Reservoirs for functional genetic diversity
DOI: 10.25585/1488093
title: Combined population genomics and transcriptomics to decipher the molecular bases of virulence and host adaptation in the poplar leaf rust fungus Melampsora larici-populina
DOI: 10.25585/1488094
title: MetaMaize: Characterizing Aboveground Maize-Endophyte Associations Influenced By Host Genotype, Climatic Region, Seed Source, and Tissue Type
DOI: 10.25585/1488095
title: The microbiome of the upper troposphere and its role in the chemistry of the atmosphere
DOI: 10.25585/1488096
title: Defining the functional diversity of the Populus root microbiome
DOI: 10.25585/1488097
title: Community metagenomic and transcriptomic analyses of microbial carbon turnover in grassland soil profiles under two rainfall regimes
DOI: 10.25585/1488098
title: From sequence to function: predicting physiological responses in Brachypodium to facilitate engineering of biofuel crops
DOI: 10.25585/1488099
title: Fungal, bacterial, and archaeal communities mediating C cycling and trace gas flux in peatland ecosystems subject to climate change
DOI: 10.25585/1488100
title: Comparative genomics of early diverging terrestrial fungi and their bacterial endosymbionts
DOI: 10.25585/1488101
title: Doubling the number of Panicoideae genome sequences
DOI: 10.25585/1488102
title: Development of a Comparative Genomics Resource for Sphagnum magellanicum
DOI: 10.25585/1488103
title: Pioneering fungal mutagenesis using Tn-seq
DOI: 10.25585/1488104
title: Fungal response to global change: adaptive genes and rates of mutation and recombination.
DOI: 10.25585/1488105
title: Microbial Dark Matter project phase II - stepping deeper into unknown territory
DOI: 10.25585/1488106
title: Unraveling the rhizosphere carbon cycle: Using comparative metatranscriptomics to identify key processes involved in root-enhanced decomposition of organic matter (CSP 2014)
DOI: 10.25585/1488107
title: Raman-based microcolony genomics and transcriptomics for studying microevolution and ecology of nitrifiers
DOI: 10.25585/1488108
title: Study of the lignocellulolytic machinery in saprobic wood and leaf litter degrading Agaricales
DOI: 10.25585/1488109
title: Seasonal variation in Antarctic microbial communities: ecology, stability and susceptibility to ecosystem change
DOI: 10.25585/1488110
title: Biogeochemical cycling links between terrestrial and marine systems
DOI: 10.25585/1488111
title: How do coral hosts communicate with their associated microbial community?
DOI: 10.25585/1488112
title: Genomes and transcriptomes of decomposer fungi responding to warming in Alaskan boreal forest
DOI: 10.25585/1488113
title: Systems Biology Approach to Fracking for Environmental Monitoring
DOI: 10.25585/1488114
title: Metagenomic mining of natural product diversity and understanding its contribution to ecosystem function in the cellulolytic fungus-growing ant symbiosis
DOI: 10.25585/1488115
title: Comparative Genomics of Powdery Mildews and Associated Host Plants
DOI: 10.25585/1488116
title: Microbial engines driving organic matter transformations in the dark ocean: an integrated biological and chemical perspective
DOI: 10.25585/1488117
title: Microbial composition and metagenomic functional potential across Tropical Peatlands: comparative evaluation and modeling of C decomposition to greenhouse gases.
DOI: 10.25585/1488118
title: Panicum virgatum small RNA sequencing to identify gene expression changes related to biofuel traits
DOI: 10.25585/1488119
title: Whole genome sequencing of aquatic fungi responsible for the degradation of recalcitrant substrates in liquid environments
DOI: 10.25585/1488120
title: Mechanisms of Interaction in the Foliar Fungal Microbiome of Populus trichocarpa
DOI: 10.25585/1488121
title: Coprophilous fungi as a model system for understanding the metagenomics of carbon cycling in microbial eukaryote communities
DOI: 10.25585/1488122
title: Creating a genome-wide sequence-indexed collection of grass mutants
DOI: 10.25585/1488123
title: Diazotrophic aboveground endophytes in native pines, poplar and willow
DOI: 10.25585/1488124
title: Spatio-temporal functional profiling in model microbial communities
DOI: 10.25585/1488125
title: Comparative genomics of a single organism: In search of acquired immunity in trees
DOI: 10.25585/1488126
title: Genomic Diversity of Pseudomonas spp.
DOI: 10.25585/1488127
title: Genome-wide analysis of chromatin accessibility and miRNA-mediated transcriptional regulation of lipid accumulation in Chlamydomonas reinhardtii
DOI: 10.25585/1488128
title: Sex Determination in the Salicaceae
DOI: 10.25585/1488129
title: Shedding light on the anaerobic wastewater treatment black-box in anthropogenic carbon cycling: exploring the uncharted ecological function of uncultured microbial taxa through next-generation sequencing technology
DOI: 10.25585/1488130
title: Functional genomics of lignocellulose degradation by Agaricomycete fungi
DOI: 10.25585/1488131
title: Understanding variance in allele specific expression in the polyploid Saccharinae
DOI: 10.25585/1488132
title: Exploiting the genomes of the Actinobacteria: plant growth promoters and producers of natural products and energy relevant enzymes united in a taxonomically unresolved phylum
DOI: 10.25585/1488133
title: Genome-resolved metagenomic analysis of microbial function in the subsurface
DOI: 10.25585/1488134
title: Tree-driven diel microbial carbon dynamics in the vadose zone
DOI: 10.25585/1488135
title: Comparative and functional genomics of shiitake mushrooms: an international collaboration to resolve evolutionary relationships, substrate specificity, growth profiles, and routes to domestication in the amphi-Pacific genus Lentinula
DOI: 10.25585/1488136
title: Exploring natural genetic diversity in switchgrass (Panicum virgatum) and its microbiome
DOI: 10.25585/1488137
title: Single Cell and Population Dynamics of Chromatin Across the Diurnal Cycle in the Model Alga Chlamydomonas
DOI: 10.25585/1488138
title: Comparative genomics and expression profiling of snow algae Chlamydomonas cribrum and Chloromonas nivalis
DOI: 10.25585/1488139
title: Metagenomic Characterization of Nitrogen-Cycling Microbial Communities Impacting Uranium Release in the Upper Colorado River Basin
DOI: 10.25585/1488140
title: Life in the extreme deep terrestrial subsurface: microbial metabolism before and after shale gas extraction
DOI: 10.25585/1488141
title: Sequencing a reference genome for Phakopsora pachyrhizi, the fungal pathogen responsible for the Asian Soybean Rust
DOI: 10.25585/1488142
title: Going long and going deep: Comprehensive open ocean community single cell genome sequencing at the model open ocean time series study site, station ALOHA
DOI: 10.25585/1488143
title: Influence of phycosphere-associated bacteria on microalgal biofuel production
DOI: 10.25585/1488144
title: Anaerobic fungi and assessment of their potential for biogas production
DOI: 10.25585/1488145
title: Comparative transcriptomics of sweet and grain sorghum to understand the mechanism and timing of sugar accumulation in an important bioenergy crop
DOI: 10.25585/1488146
title: Systems level insights into methane cycling in arid and semi-arid ecosystems via community metagenomics and metatranscriptomics
DOI: 10.25585/1488147
title: Dissecting the different approaches of ascomycete fungi to degrade plant biomass
DOI: 10.25585/1488148
title: Exploring the genomic basis for the global diversification by the ectomycorrhizal genus Pisolithus
DOI: 10.25585/1488149
title: Acquisition of the sequestrate (truffle like) habit by basidiomycete macrofungi
DOI: 10.25585/1488150
title: Supporting the development of microbial probiotics for grasses useful in sustainable bioenergy production.
DOI: 10.25585/1488151
title: 1KFG: Deep Sequencing of Ecologically-relevant Dikarya
DOI: 10.25585/1488152
title: Diel cycles of gene expression in oligotrophic, dystrophic, and eutrophic lakes to identify new gene functions and dissect carbon cycling metabolisms
DOI: 10.25585/1488153
title: Genomics of the early diverging lineages of fungi and their transition to terrestrial, plant-based ecologies
DOI: 10.25585/1488154
title: The Intermediate Wheatgrass Genome: A resource for understanding mechanisms of perenniality and accelerating the development of perennial crops.
DOI: 10.25585/1488155
title: Pathobiome of bioenergy trees
DOI: 10.25585/1488156
title: Investigating the diversity of mycorrhizal fungi to understand the evolution and function of symbiosis with orchids
DOI: 10.25585/1488157
title: Functional genomics of photosynthesis in Chlamydomonas, JGIs flagship alga
DOI: 10.25585/1488158
title: Systems Analysis of the Physiological and Molecular Mechanisms of Sorghum Nitrogen Use Efficiency, Water Use Efficiency and Interactions with the Soil Microbiome
DOI: 10.25585/1488159
title: Greater than the sum of its parts? A synthetic microbial community approach to untangle member interactions and exometabolite production
DOI: 10.25585/1488160
title: Microbial Carbon Transformations in Wet Tropical Soils: Effects of Redox Fluctuation
DOI: 10.25585/1488161
title: RNAseq enabled metabolic modeling of disease resistance to Septoria canker in the DOE flagship P. trichocarpa
DOI: 10.25585/1488162
title: Defining the Molecular Basis of Extreme Resistance to Ionizing Radiation
DOI: 10.25585/1488164
title: Dynamics of Bacterial Carbon and Sulfur Cycling in a Coastal Environment
DOI: 10.25585/1488165
title: Core and pangenomes of soil and plant-associated prokaryotes
DOI: 10.25585/1488166
title: Ice plant gene atlas resource development for Mesembryanthemum crystallinum, a facultative crassulacean acid metabolism (CAM) model for improved water-use efficiency of bioenergy feedstocks.
DOI: 10.25585/1488167
title: Functional genomics of pyrophilous fungi determining the fate of pyrolyzed carbon in post-fire soils
DOI: 10.25585/1488168
title: Fungal interaction networks in biological soil crusts
DOI: 10.25585/1488169
title: Genome sequencing of C3 and CAM Yucca species
DOI: 10.25585/1488170
title: Exploring the role of drought-induced plant associated microbes in promoting plant fitness in Sorghum bicolor and Oryza sativa
DOI: 10.25585/1488171
title: Understanding polyploidy through the generation of the first sugarcane genome sequence
DOI: 10.25585/1488172
title: Genetic diversity of shrub willow pathogen Melampsora americana aided by genome sequence
DOI: 10.25585/1488173
title: Functional gene network regulation in tripartite plant-fungal-bacterial mutualisms of bioenergy plants and algae
DOI: 10.25585/1488174
title: Genome sequencing of Zygnematales, the closest algal lineage to land plants, as a foundation for comparative genomic, transcriptomic, epigenetic, evolutionary, and biochemical studies
DOI: 10.25585/1488175
title: Unlocking the photosynthetic diversity of cryptophyte algae through whole-genome sequencing.
DOI: 10.25585/1488176
title: Defining gene function in rumen microbes
DOI: 10.25585/1488177
title: Pan-genomics of big bluestem, a broadly adapted dominant grass
DOI: 10.25585/1488179
title: Metatranscriptome analysis of fungal decay of Pinus contorta
DOI: 10.25585/1488180
title: A Complete-Sequence Population for Pan-Genome Analysis of Sorghum
DOI: 10.25585/1488181
title: Spatiotemporal Characterization of Microbial Communities Controlling Estuarine Nitrogen and Carbon Cycling in the San Francisco Bay-Delta
DOI: 10.25585/1488182
title: Gene atlas for Kalanchoe laxiflora, a obligate crassulacean acid metabolism (CAM) model for genetic improvement of water-use efficiency in bioenergy feedstocks
DOI: 10.25585/1488183
title: The role of acquired phototrophy in phytoplankton blooms: Insights from the Mesodinium rubrum genome
DOI: 10.25585/1488185
title: Single-cell (meta-)genomics of uncultivable large sulfur bacteria and their epibionts: investigating host-microbe mediation of biogeochemical cycling
DOI: 10.25585/1488186
title: Mapping the global methanome
DOI: 10.25585/1488187
title: Expanding the dark matter reference catalog by targeting taxonomic blind spots
DOI: 10.25585/1488188
title: Geo-metabolomics of a saltmarsh: Combining in situ, bulk, genomic, transcriptomic, and DOMeomic data streams
DOI: 10.25585/1488189
title: Open Green Genomes: a framework for comparative plant genomics
DOI: 10.25585/1488192
title: Comparative genomics and germ plasm diversity in Acutodesmus, a green microalgal bioenergy feedstock candidate with potential for breeding and hybridization.
DOI: 10.25585/1488193
title: Elucidating viral "dark matter" and biogeochemical impacts in extreme environments
DOI: 10.25585/1488194
title: Leveraging natural diversity to Identify the genetic basis of microbial success in legume-rhizobia mutualism and non-host environments.
DOI: 10.25585/1488178
title: Perenniality, abiotic stress tolerance, and biomass allocation in Brachypodium, a model grass genus for bioenergy
DOI: 10.25585/1488184
title: Exploring the G3 Gymnosperm Giga-Genomes for Carbon Sequestration, Biofuels, and Bioproducts
DOI: 10.25585/1488190
title: High-throughput sequencing and metabolomics enabled phenomics to investigate integration of heat and circadian responses in the model green alga Chlamydomonas reinhardtii
DOI: 10.25585/1488191
title: Exploring the role of DNA methylation in biofuel production, environmental sensing and development in basal fungi
DOI: 10.25585/1488195
title: Determination of Fungal Chromatin Regulatory Network and Its Impact on Gene Expression
DOI: 10.25585/1488196
title: Integrated ecosystem genomics across a vast and vital freshwater system
DOI: 10.25585/1488197
title: Investigation of diel variation in microbial decomposition processes
DOI: 10.25585/1488198
title: Combined metagenomics and metatranscriptomics to evaluate dissolved organic matter metabolizing microbes in big rivers of the U.S.
DOI: 10.25585/1488199
title: Mechanisms of co-evolutionary adaptation of soil microbes.
DOI: 10.25585/1488200
title: Microbial metabolic dependency and its impacts on the soil carbon cycle
DOI: 10.25585/1488201
title: Development of novel approaches to target microbial drivers of C cycling in soil aggregates
DOI: 10.25585/1488202
title: Genome-enabled Investigations of the Role of Secreted Proteins and Reactive Metabolites in Carbon Degradation by Pure and Mixed Ascomycete Fungal Communities
DOI: 10.25585/1488203
title: Integrated genomic/transcriptomic/secretomic study of plant-fungal interactions between pines and their symbiotic ectomycorrhizal fungi in the mushroom genus Suillus
DOI: 10.25585/1488204
title: Uncovering the composition and function of the aquatic microbiome for duckweeds
DOI: 10.25585/1488205
title: Integrated biogeochemical modeling of microbial consortia mediating anaerobic oxidation of methane in dynamic methane hydrate-bearing sediments
DOI: 10.25585/1488206
title: Dissecting intraspecies diversity in fungal wood decay
DOI: 10.25585/1488208
title: Fluorescence-based cell sorting and targeted proteomic analysis of active methane-oxidizing syntrophic consortia from environmental samples
DOI: 10.25585/1488209
title: A Rhizosphere-Scale Investigation of the Relationship Between Plant Productivity and Methane Emissions from Wetlands
DOI: 10.25585/1488210
title: Integrated Omics Analyses of 100 Populus Genotypes for Crop Improvement
DOI: 10.25585/1488211
title: Genomes to dynamic decay communities: Understanding fungal interactions during early decomposition events in natural lignocellulosic substrate
DOI: 10.25585/1488214
title: The role of priming effects on the conversion of blue carbon to CO2 in the coastal zone
DOI: 10.25585/1488215
title: Molecular mechanisms underlying changes in the temperature sensitive respiration response of forest soils to long-term experimental warming
DOI: 10.25585/1488216
title: Global warming induced salinity shifts: metabolic responses by algal-bacterial consortia
DOI: 10.25585/1488217
title: Something old, something new: systems-level insights into plant-microbial-permafrost carbon dynamics by parallel high-resolution organic matter and microbial meta-omics.
DOI: 10.25585/1488218
title: Understanding conversion of biomass-derived carbon into lipids and terpenoids in the oleaginous yeast Rhodosporidium toruloides
DOI: 10.25585/1488219
title: Deciphering controls on plant decomposition in Arctic ecosystems: Identifying unknown microbial condensed tannin degradation pathways
DOI: 10.25585/1488220
title: Tracking switchgrass photosynthate via 13CO2 pulse-chase into the rhizosphere microbiome and metabolome
DOI: 10.25585/1488222
title: Investigating the carbon cycling implications of changing microbial leaf litter decomposition across a permafrost thaw gradient.
DOI: 10.25585/1488223
title: Advancing the molecular-level understanding of terrestrial organic matter transformations by microbes in a rapidly changing Arctic Ocean
DOI: 10.25585/1488224
title: The synchronization of microbial and plant phenology in a mountainous watershed and its importance for nutrient retention under changing hydrologic regimes.
DOI: 10.25585/1488225
title: Scaling molecular mechanisms of mycorrhizal-decomposer interactions to emergent ecosystem carbon balance
DOI: 10.25585/1488226
title: Panicum virgatum AP13 Genome Sequencing
DOI: 10.25585/1488227
title: Botryococcus braunii Whole Genome Shotgun Sequencing
DOI: 10.25585/1488229
title: SAR11 Genome Evolution
DOI: 10.25585/1488230
title: Phaeocystis antarctica: The genome sequencing of the eukaryote
DOI: 10.25585/1488231
title: Marchantia polymorpha
DOI: 10.25585/1488232
title: Nomination of the Halophilic Unicellular Green Alga Dunaliella salina for Genome Sequencing
DOI: 10.25585/1488233
title: Proposal to Sequence the Genome of Mimulus guttatus, a Plant Model System for Ecological and Evolutionary Genomics.
DOI: 10.25585/1488234
title: Complete Genome Sequencing of the Prymnesiophyte Haptophyte Phaeocystis globosa
DOI: 10.25585/1488235
title: Marine microbial communities from multiple species of wood-boring bivalves (shipworm isolates)
DOI: 10.25585/1488236
title: Porphyra (a marine red alga)
DOI: 10.25585/1488237
title: Arabidopsis comparative genomics (ACG) - Brassica, Boechera, Arabidopsis
DOI: 10.25585/1488239
title: Mechanisms of marine protistan predation: genomics and transcriptomics of the predatory nanoflagellates Paraphysomonas, Ochromonas and Spumella