cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15310589
title: TABLE 2 in Functional Signatures of Surface Pollen and Vegetation Are Broadly Similar: Good News for Past Reconstructions of Vegetation

description: TABLE 2 | List of the six traits used in this study with their main distribution statistical values on the ACA taxa checklist.
TraitFull nameUnitMeanSDMinMaxNspeciesFunctional significancesHeightAdult plant height (vegetative)(m)3.026.390.00474.77423Above-ground competition, light capture, dispersal distanceLeafAreaLeaf area(mm2)358011,9001272,0003260Light interception, energy balanceN LeafN content per unit leaf mass(mg.g−1)23.99.180.9799.62356Light capture, photosynthetic rateSeedMassDiaspore mass(mg)14258200.0005404,0004861Dispersal and regeneration strategy, seedling competitionSLASpecific leaf area(mm2.mg−1)0.020.010.00050.223619Photosynthetic rate, leaf longevitySSDStem specific density(mg.mm−3)0.320.190.071.552465Trade-off between growth potential and mortality risk
description: Published as part of Dugerdil, Lucas, Peyron, Odile, Violle, Cyrille, Joannin, Sébastien, Ménot, Guillemette, Denelle, Pierre, Bruelheide, Helge, Chytrý, Milan, Field, Richard, Hatim, Mohamed Z., Gholizadeh, Hamid, Dolezal, Jiri, Pillar, Valério D., Shaltout, Kamal H., Schrodt, Franziska & Garnier, Eric, 2025, Functional Signatures of Surface Pollen and Vegetation Are Broadly Similar: Good News for Past Reconstructions of Vegetation, pp. 6 in Journal of Biogeography (e 15100) 52 (5) on page 6, DOI: 10.1111/jbi.15100, http://zenodo.org/record/15304557
DOI: 10.5281/zenodo.15310590
title: TABLE 2 in Functional Signatures of Surface Pollen and Vegetation Are Broadly Similar: Good News for Past Reconstructions of Vegetation

description: TABLE 2 | List of the six traits used in this study with their main distribution statistical values on the ACA taxa checklist.
TraitFull nameUnitMeanSDMinMaxNspeciesFunctional significancesHeightAdult plant height (vegetative)(m)3.026.390.00474.77423Above-ground competition, light capture, dispersal distanceLeafAreaLeaf area(mm2)358011,9001272,0003260Light interception, energy balanceN LeafN content per unit leaf mass(mg.g−1)23.99.180.9799.62356Light capture, photosynthetic rateSeedMassDiaspore mass(mg)14258200.0005404,0004861Dispersal and regeneration strategy, seedling competitionSLASpecific leaf area(mm2.mg−1)0.020.010.00050.223619Photosynthetic rate, leaf longevitySSDStem specific density(mg.mm−3)0.320.190.071.552465Trade-off between growth potential and mortality risk
description: Published as part of Dugerdil, Lucas, Peyron, Odile, Violle, Cyrille, Joannin, Sébastien, Ménot, Guillemette, Denelle, Pierre, Bruelheide, Helge, Chytrý, Milan, Field, Richard, Hatim, Mohamed Z., Gholizadeh, Hamid, Dolezal, Jiri, Pillar, Valério D., Shaltout, Kamal H., Schrodt, Franziska & Garnier, Eric, 2025, Functional Signatures of Surface Pollen and Vegetation Are Broadly Similar: Good News for Past Reconstructions of Vegetation, pp. 6 in Journal of Biogeography (e 15100) 52 (5) on page 6, DOI: 10.1111/jbi.15100, http://zenodo.org/record/15304557
DOI: 10.5281/zenodo.15310591
title: TABLE 3 in Functional Signatures of Surface Pollen and Vegetation Are Broadly Similar: Good News for Past Reconstructions of Vegetation

description: TABLE 3 | Results of ANOVA performed to assess the impact of aggregation schemes (vegetation taxa, pollen types fine and coarse) and biome distribution on the variance of CWM traits Details of each relation are inferred by the ad-hoc Tukey significant test in Table S4.
Sample typeBiomesd fFpd fFpLeafN2359.39<0.0015195.38<0.001SSD22.110.121551050.23<0.001Height21376.17<0.00152811.26<0.001SeedMass214.19<0.00151350.92<0.001LeafArea25.30.0055948.6<0.001SLA2187.61<0.0015509.21<0.001
Abbreviations: df = degree of freedom, F = F -statistic, and probability value.
description: Published as part of Dugerdil, Lucas, Peyron, Odile, Violle, Cyrille, Joannin, Sébastien, Ménot, Guillemette, Denelle, Pierre, Bruelheide, Helge, Chytrý, Milan, Field, Richard, Hatim, Mohamed Z., Gholizadeh, Hamid, Dolezal, Jiri, Pillar, Valério D., Shaltout, Kamal H., Schrodt, Franziska & Garnier, Eric, 2025, Functional Signatures of Surface Pollen and Vegetation Are Broadly Similar: Good News for Past Reconstructions of Vegetation, pp. 9 in Journal of Biogeography (e 15100) 52 (5) on page 9, DOI: 10.1111/jbi.15100, http://zenodo.org/record/15304557
DOI: 10.5281/zenodo.15310592
title: TABLE 3 in Functional Signatures of Surface Pollen and Vegetation Are Broadly Similar: Good News for Past Reconstructions of Vegetation

description: TABLE 3 | Results of ANOVA performed to assess the impact of aggregation schemes (vegetation taxa, pollen types fine and coarse) and biome distribution on the variance of CWM traits Details of each relation are inferred by the ad-hoc Tukey significant test in Table S4.
Sample typeBiomesd fFpd fFpLeafN2359.39<0.0015195.38<0.001SSD22.110.121551050.23<0.001Height21376.17<0.00152811.26<0.001SeedMass214.19<0.00151350.92<0.001LeafArea25.30.0055948.6<0.001SLA2187.61<0.0015509.21<0.001
Abbreviations: df = degree of freedom, F = F -statistic, and probability value.
description: Published as part of Dugerdil, Lucas, Peyron, Odile, Violle, Cyrille, Joannin, Sébastien, Ménot, Guillemette, Denelle, Pierre, Bruelheide, Helge, Chytrý, Milan, Field, Richard, Hatim, Mohamed Z., Gholizadeh, Hamid, Dolezal, Jiri, Pillar, Valério D., Shaltout, Kamal H., Schrodt, Franziska & Garnier, Eric, 2025, Functional Signatures of Surface Pollen and Vegetation Are Broadly Similar: Good News for Past Reconstructions of Vegetation, pp. 9 in Journal of Biogeography (e 15100) 52 (5) on page 9, DOI: 10.1111/jbi.15100, http://zenodo.org/record/15304557
DOI: 10.15468/dl.b3x6nd
title: Occurrence Download

description: A dataset containing 4881 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Hyla femoralis Bosc, 1800)"
 ]
}

 The dataset includes 4881 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007939-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2dcth9
title: Occurrence Download

description: A dataset containing 33682 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pecari tajacu (Linnaeus, 1758)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 33682 records from 318 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007937-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nfjv99
title: Occurrence Download

description: A dataset containing 1226 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Plethodon cheoah Highton & Peabody, 2000)"
 ]
}

 The dataset includes 1226 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007940-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5284/1129184
title: Site Data from an Archaeological Evaluation at 14-18 West Bar Green, Sheffield, July 2023

description: This collection comprises images and a report of an archaeological evaluation by trial trenching. Work was carried out on land at 14-18 West Bar Green, Sheffield, by Archaeological Services WYAS, in July 2023. Artefacts including pottery and clay pipe dating from the 19th century were also recovered.
DOI: 10.6084/m9.figshare.28903007
title: Raw data for 'Suitability of electrochemical sensing on screen-printed carbon electrodes for the identification of eutylone (βk-EBDB)'

description: This research investigated the electrochemical sensing of eutylone using voltammetry on commercially available screen-printed carbon electrodes. The purpose of the study was to evaluate the method's performance as an on-site presumptive drug test.
DOI: 10.6084/m9.figshare.28903007.v1
title: Raw data for 'Suitability of electrochemical sensing on screen-printed carbon electrodes for the identification of eutylone (βk-EBDB)'

description: This research investigated the electrochemical sensing of eutylone using voltammetry on commercially available screen-printed carbon electrodes. The purpose of the study was to evaluate the method's performance as an on-site presumptive drug test.
DOI: 10.5281/zenodo.15310577
title: BIOMAT-MONER Corpus: Train and Validation Sets

description: BIOMAT-MONER Train and Validation Sets

BIOMAT-MONER stands for BIOMATerials Manufactured Object Named Entity Recognition. It is a corpus developed within the scope of the Horizon Europe BIOMATDB project to support the extraction and classification of manufactured object relevant to biomaterials research entity mentions from scientific literature in the biomaterials domain. The corpus focuses on the annotation of manufactured objects, including references to devices, tools, experimental apparatus, and implantable medical products, along with their chemical, physical, and mechanical properties among other relevant features, as well as their trade names, that are described in the context of their use in biomaterials-related experiments or applications.

The corpus was created through a collaborative effort involving domain experts, who were tasked with the establishment of comprehensive and accurate annotation guidelines for the manual annotation of the final gold standard corpus. To ensure domain relevance and terminological coverage, PubMed abstracts were carefully selected based on relevant MeSH (Medical Subject Headings) terms associated with biomaterials, medical devices, and related fields. The abstracts were then manually annotated according to the rules predefined in the annotation guidelines.

This repository contains the train (750 documents) and validation (100 documents) sets of the BIOMAT-MONER Corpus, which are made available under open access for public use. These sets have been released to support the development of Named Entity Recognition (NER) models for biomaterials-related concept extraction from scientific literature, particularly those mentions referring to manufactured objects relevant to biomaterials research.

The test set is not included in this repository, as it is reserved for a future shared task planned within the scope of the project. For this reason, access to the full corpus remains restricted, but will be made publicly available upon completion of the shared task.

Resources



Project Website

Biomaterials Marketplace

Biomaterials Database

BIOMAT-MONER full corpus

Annotation Guidelines
DOI: 10.5281/zenodo.15310578
title: BIOMAT-MONER Corpus: Train and Validation Sets

description: BIOMAT-MONER Train and Validation Sets

BIOMAT-MONER stands for BIOMATerials Manufactured Object Named Entity Recognition. It is a corpus developed within the scope of the Horizon Europe BIOMATDB project to support the extraction and classification of manufactured object relevant to biomaterials research entity mentions from scientific literature in the biomaterials domain. The corpus focuses on the annotation of manufactured objects, including references to devices, tools, experimental apparatus, and implantable medical products, along with their chemical, physical, and mechanical properties among other relevant features, as well as their trade names, that are described in the context of their use in biomaterials-related experiments or applications.

The corpus was created through a collaborative effort involving domain experts, who were tasked with the establishment of comprehensive and accurate annotation guidelines for the manual annotation of the final gold standard corpus. To ensure domain relevance and terminological coverage, PubMed abstracts were carefully selected based on relevant MeSH (Medical Subject Headings) terms associated with biomaterials, medical devices, and related fields. The abstracts were then manually annotated according to the rules predefined in the annotation guidelines.

This repository contains the train (750 documents) and validation (100 documents) sets of the BIOMAT-MONER Corpus, which are made available under open access for public use. These sets have been released to support the development of Named Entity Recognition (NER) models for biomaterials-related concept extraction from scientific literature, particularly those mentions referring to manufactured objects relevant to biomaterials research.

The test set is not included in this repository, as it is reserved for a future shared task planned within the scope of the project. For this reason, access to the full corpus remains restricted, but will be made publicly available upon completion of the shared task.

Resources



Project Website

Biomaterials Marketplace

Biomaterials Database

BIOMAT-MONER full corpus

Annotation Guidelines
DOI: 10.15468/dl.7vhvmj
title: Occurrence Download

description: A dataset containing 4445 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Streptoglossa Steetz ex F.Muell."
 ]
}

 The dataset includes 4445 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007943-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4k9jyv
title: Occurrence Download

description: A dataset containing 5858 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Agrotis clavis Hufnagel, 1766"
 ]
}

 The dataset includes 5858 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007946-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.898mue
title: Occurrence Download

description: A dataset containing 9008 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Eleutherodactylus planirostris (Cope, 1862))"
 ]
}

 The dataset includes 9008 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007944-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jmh93q
title: Occurrence Download

description: A dataset containing 12425 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Telekia Baumg."
 ]
}

 The dataset includes 12425 records from 215 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007945-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngbhwr
title: Occurrence Download

description: A dataset containing 2733 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Plethodon chlorobryonis Mittleman, 1951)"
 ]
}

 The dataset includes 2733 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007949-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wau24w
title: Occurrence Download

description: A dataset containing 368 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aratinga solstitialis (Linnaeus, 1758)"
 ]
}

 The dataset includes 368 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007948-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4yqn5s
title: Occurrence Download

description: A dataset containing 3310 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Dryophytes gratiosus (LeConte, 1856))"
 ]
}

 The dataset includes 3310 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007950-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3t6pym
title: Occurrence Download

description: A dataset containing 190 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Neria commutata (Czerny, 1930)"
 ]
}

 The dataset includes 190 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007953-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7j8w2w
title: Occurrence Download

description: A dataset containing 4810 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tessaria Ruiz & Pav."
 ]
}

 The dataset includes 4810 records from 204 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007951-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mbnks5
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cerradomys subflavus (Wagner, 1842)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 143 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007954-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ththh6
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Festuca violacea subsp. macrathera (Hack. ex Beck) Markgr.-Dann., Festuca macrathera (Hack. ex Beck) Pignatti & Markgr.-Dann., Festuca violacea subsp. italica Foggi, Gr.Rossi & Signorini)",
 "Year 1960-2025"
 ]
}

 The dataset includes 20 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007957-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3eehs3
title: Occurrence Download

description: A dataset containing 28805 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Ensatina eschscholtzii Gray, 1850)"
 ]
}

 The dataset includes 28805 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007955-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2f5ym6
title: CCDC 2240048: Experimental Crystal Structure Determination

description: Related Article: Min Li, Yin Wei, Min Shi|2025|Org.Biomol.Chem.|23|4166|doi:10.1039/D5OB00238A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jcs8z
title: CCDC 2335021: Experimental Crystal Structure Determination

description: Related Article: Parbin Rahman, Nikita Chakraborty, Bhisma K. Patel, Kamal K. Rajbongshi|2025|Org.Biomol.Chem.|23|4036|doi:10.1039/D5OB00166H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kbm9v
title: CCDC 2363697: Experimental Crystal Structure Determination

description: Related Article: Sheng-Feng Wu, Zhi-Yuan Wang, Xing-Wen Sun|2025|Org.Biomol.Chem.|23|4197|doi:10.1039/D5OB00010F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l1zsf
title: CCDC 2385195: Experimental Crystal Structure Determination

description: Related Article: Alexander V. Migulin, Constantine V. Milyutin, Boris V. Lichitsky, Stepan M. Korobkov, Andrey N. Komogortsev|2025|Org.Biomol.Chem.|23|4172|doi:10.1039/D5OB00264H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l68bf
title: CCDC 2389304: Experimental Crystal Structure Determination

description: Related Article: BALLANKI TRINADH|2024|CSD Communication|||
description: Related Article: Trinadh Ballanki, Aishwarya Subramanian, Baby Viswambharan|2025|Org.Biomol.Chem.|23|4152|doi:10.1039/D5OB00181A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2l7kfv
title: CCDC 2390547: Experimental Crystal Structure Determination

description: Related Article: Yazdanbakhsh Lotfi Nosood, Negin Fattahi Ghahnavieh, Ahmad Takallou, Ali Rostami, Amirhossein Ebrahimi, Muhammad U. Anwar, Ahmed Al-Harrasi|2025|Org.Biomol.Chem.|23|4084|doi:10.1039/D4OB01702A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.