cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/0mkj2-v9y60
title: HeLa cells expressing TRIM5α-YFP

description: Raw data files of HeLa cells expressing TRIM5α-YFP
description: <strong>Tilt Series Date:</strong> 2017-02-24</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Hela cells expressing TRIM5a-YFP</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> None</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-02-24-28/rawdata/</p>tomography13.mrc,  Tilt Series (Pixel Size 3.712 nm), 2.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-02-24-28/rawdata/tomography13.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography13.rec,  Reconstruction (Pixel Size 14.848 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-02-24-28/3dimage_116994/tomography13.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/j9c9g-tcw74
title: TopJ + MPN119

description: Raw data files of TopJ + MPN119
description: <strong>Tilt Series Date:</strong> 2015-04-17</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 90.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-17-20/rawdata/</p>atlas10020.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-17-20/rawdata/atlas10020.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas10020_full.rec,  Reconstruction (Pixel Size 1.56 nm), 222.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-17-20/3dimage_54464/atlas10020_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.e9vzey
title: Occurrence Download

description: A dataset containing 4705 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calystegia sepium",
 "Country is Finland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4705 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046683-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/pjz16-xzr33
title: Pseudomonas aerugionsa PAO1

description: WT Pseudomonas aeruginosa
description: <strong>Tilt Series Date:</strong> 2015-05-29</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-41/rawdata/</p>WTPAO1NEW0010.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-41/rawdata/WTPAO1NEW0010.mrc"
        > <i class="download icon"></i> Download </a></p>

        WTPAO1NEW0010_part121_55.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-41/3dimage_57583/WTPAO1NEW0010_part121_55.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.xtjvwc
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calystegia sepium",
 "Country is Chile",
 "HasCoordinate is true"
 ]
}

 The dataset includes 53 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046681-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/vbwqk-9gp45
title: E. coli pED208_log

description: cells expressing T4SS in log phase
description: <strong>Tilt Series Date:</strong> 2015-04-13</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-04-13-10/rawdata/</p>pED_log20010.mrc,  Tilt Series (Pixel Size 0.5 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-04-13-10/rawdata/pED_log20010.mrc"
        > <i class="download icon"></i> Download </a></p>

        pED_log20010_full.rec,  Reconstruction (Pixel Size 2.0 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-04-13-10/3dimage_54013/pED_log20010_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.23728/b2share.1cf853faf0964658a7372b4ea06619e7
title: Data availability from Maria Maricely Chuquilin Condor

description: Data availability from Maria Maricely Chuquilin Condor
DOI: 10.22002/tzq5d-e6b28
title: P41+P41

description: Raw data files of P41+P41
description: <strong>Tilt Series Date:</strong> 2015-04-18</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 90.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-18-29/rawdata/</p>atlas20016.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-18-29/rawdata/atlas20016.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas20016_part131_11.rec,  Reconstruction (Pixel Size 1.56 nm), 222.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-04-18-29/3dimage_54532/atlas20016_part131_11.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/myrah-18d29
title: pED208_log

description: E. coli cells carrying the pED208 plasmid for T4SS were grown to OD of 0.5
description: <strong>Tilt Series Date:</strong> 2015-03-28</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-03-28-15/rawdata/</p>pED208_log0011.mrc,  Tilt Series (Pixel Size 0.5 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-03-28-15/rawdata/pED208_log0011.mrc"
        > <i class="download icon"></i> Download </a></p>

        pED208_log0011_part121_54.rec,  Reconstruction (Pixel Size 2.0 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-03-28-15/3dimage_53434/pED208_log0011_part121_54.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/cq0jf-27f87
title: Pseudomonas aerugionsa PAO1

description: WT Pseudomonas aeruginosa
description: <strong>Tilt Series Date:</strong> 2015-05-29</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-61/rawdata/</p>WTPAO1NEW0030.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-61/rawdata/WTPAO1NEW0030.mrc"
        > <i class="download icon"></i> Download </a></p>

        WTPAO1NEW0030_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-61/3dimage_57623/WTPAO1NEW0030_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.2wqxtk
title: Occurrence Download

description: A dataset containing 18282 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calystegia sepium",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 18282 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046682-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/sh2h9-ywf84
title: E. coli EEEE

description: E. coli EEEE, penicillin lysedmotion corrected
description: <strong>Tilt Series Date:</strong> 2015-03-13</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: 7.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-13-8/rawdata/</p>EEEEmot0002_mcorr.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-13-8/rawdata/EEEEmot0002_mcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        EEEEmot0002_mcorr_part61_2.rec,  Reconstruction (Pixel Size 1.28 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-13-8/3dimage_53233/EEEEmot0002_mcorr_part61_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ctpx9-wkv14
title: HeLa cells + thymidine

description: thymidine is used to synchronize HeLa cell division at cytokinesis stage.
description: <strong>Tilt Series Date:</strong> 2015-06-16</p>
<strong>Data Taken By:</strong> Shrawan kumar Mageswaran</p>
<strong>Species / Specimen:</strong> HeLa cells</p>
<strong>Strain:</strong> ATCC</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -8.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> IMOD</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2015-06-16-2/rawdata/</p>hela_thym_montage0002.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2015-06-16-2/rawdata/hela_thym_montage0002.mrc"
        > <i class="download icon"></i> Download </a></p>

        hela_thym_montage0002_part121_17.rec,  Reconstruction (Pixel Size 2.4 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2015-06-16-2/3dimage_58459/hela_thym_montage0002_part121_17.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ayzcp-z7d61
title: Pseudomonas aerugionsa PAO1

description: WT Pseudomonas aeruginosa
description: <strong>Tilt Series Date:</strong> 2015-05-29</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-59/rawdata/</p>WTPAO1NEW0028.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-59/rawdata/WTPAO1NEW0028.mrc"
        > <i class="download icon"></i> Download </a></p>

        WTPAO1NEW0028_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-59/3dimage_57619/WTPAO1NEW0028_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/a6v1z-csn58
title: V. cholerae

description: for MSHA pili
description: <strong>Tilt Series Date:</strong> 2016-01-04</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-01-04-71/3dimage_72127/</p>20160104_Vcholerae_MSHA_10071_part121_2.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-01-04-71/3dimage_72127/20160104_Vcholerae_MSHA_10071_part121_2.rec"
        > <i class="download icon"></i> Download </a></p>

        20160104_Vcholerae_MSHA_10071.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-01-04-71/rawdata/20160104_Vcholerae_MSHA_10071.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/z2whm-68513
title: Cthermocellum1_d3

description: glu + cellobiose
description: <strong>Tilt Series Date:</strong> 2015-05-08</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Clostridium thermocellum</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-08-11/rawdata/</p>Cthermo1_d3c.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-08-11/rawdata/Cthermo1_d3c.mrc"
        > <i class="download icon"></i> Download </a></p>

        Cthermo1_d3c.rec,  Reconstruction (Pixel Size 2.4 nm), 1.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-05-08-11/3dimage_56152/Cthermo1_d3c.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/vsgc9-20496
title: E. coli EEEE

description: E. coli EEEE, penicillin lysedmotion corrected
description: <strong>Tilt Series Date:</strong> 2015-03-13</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: 7.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-13-18/rawdata/</p>EEEEmot0012_mcorr.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-13-18/rawdata/EEEEmot0012_mcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        EEEEmot0012_mcorr_full.rec,  Reconstruction (Pixel Size 1.28 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-13-18/3dimage_53252/EEEEmot0012_mcorr_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/dtr86-rmn69
title: E. coli EEEE

description: Penicillin lysed E. coli (grown in TB)
description: <strong>Tilt Series Date:</strong> 2015-03-06</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: 6.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-06-34/rawdata/</p>EEEENEW0009.mrc,  Tilt Series (Pixel Size 0.27 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-06-34/rawdata/EEEENEW0009.mrc"
        > <i class="download icon"></i> Download </a></p>

        EEEENEW0009_full.rec,  Reconstruction (Pixel Size 1.08 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-03-06-34/3dimage_52720/EEEENEW0009_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/78dhk-37923
title: PW1307

description: PW 1307 Pseudomonas aeruginosa PAO1 delta CheA (F7)transposon mutant collection
description: <strong>Tilt Series Date:</strong> 2015-05-29</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-16/rawdata/</p>PW1307deltaCheA0025.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-05-29-16/rawdata/PW1307deltaCheA0025.mrc"
        > <i class="download icon"></i> Download </a></p>

        PW1307deltaCheA0025.rec,  Reconstruction (Pixel Size 1.28 nm), 1.4 GB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.s26q7t
title: Occurrence Download

description: A dataset containing 93914 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Epipelagic mesozooplankton distribution and abundance in Southern Ocean Atlantic sector and the North Atlantic and Arctic 1996-2013"
 ]
}

 The dataset includes 93914 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046662-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.