cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15322846
title: Molecular Dynamics Simulation Data for "Repeatability of protein structural evolution following convergent gene fusions"

description: Supplementary MD source data for "Repeatability of protein structural evolution following convergent gene fusions"



MD_data.tar.gz (29.68 GB)Contains molecular dynamics (MD) simulation data performed using GROMACS. Each folder corresponds to an individual protein or its oligomeric state.Each folder includes:      Initial structures     Topology files.     Configuration files.     Simulation outputs.



6AHC/MD simulation data for an AdhE hexamer (compact form; PDB ID: 6AHC)

6AHC_dimer/MD simulation data for chains D and E of an AdhE hexamer (compact form; PDB ID: 6AHC)

BdhE/MD simulation data for a BdhE tetramer (PDB ID: 9LDL)

BdhE_dimer/MD simulation data for BdhE dimer (PDB ID: 9LDL)



MD_movies.tar.gz (4.35 GB)Contains four MD simulation movies (Run 1) of the AdhE dimer and hexamer, and the BdhE dimer and tetramer.

pse_files.tar.gz (15.49 MB)Includes resources for RMSF visualization using PyMOL:      A Python script for generating RMSF visualizations.     A TSV file containing RMSF values.     PDB files.    PyMOL session files (.pse) showing the visualized results.

result_tsv_files.tar.gz (3.01 MB)



RMSD_summary.tsvThe RMSD value during the simulation of protein structures.

RMSF_protein_summary.tsvThe RMSF value of protein atoms.
DOI: 10.15468/dl.h99dr4
title: Occurrence Download

description: A dataset containing 2493 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euphorbia maculata",
 "Country is Germany",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2493 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051907-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aee9p3
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euphorbia maculata",
 "Country is Iran (Islamic Republic of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051909-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qmy8j2
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cenchrus clandestinus",
 "Country is Costa Rica",
 "HasCoordinate is true"
 ]
}

 The dataset includes 62 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051908-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16459939
title: ML model predictions
DOI: 10.5281/zenodo.16459938
title: ML model predictions
DOI: 10.15468/dl.km3mv7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Laburnum xwatereri",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051910-250717081556266/datasets/export for details.
DOI: 10.15468/dl.czjua9
title: Occurrence Download

description: A dataset containing 1933 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Emberiza variabilis)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 1933 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051912-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gfurbj
title: Occurrence Download

description: A dataset containing 10479 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Emberiza tristrami)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 10479 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051911-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5pbzhb
title: Occurrence Download

description: A dataset containing 104457 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Elodea nuttallii"
 ]
}

 The dataset includes 104457 records from 571 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051816-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mnh852
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Jasminum fluminense",
 "Country is Cuba",
 "HasCoordinate is true"
 ]
}

 The dataset includes 18 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051914-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mcb3nw
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Jasminum fluminense",
 "Country is Bahamas",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051913-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7szdjg
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bergenia cordifolia",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051915-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y73nfm
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cenchrus clandestinus",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051916-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12585884
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.hpcqux
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euphorbia maculata",
 "Country is Israel",
 "HasCoordinate is true"
 ]
}

 The dataset includes 90 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051917-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fx9ygr
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cenchrus clandestinus",
 "Country is Indonesia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051918-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a356g7
title: Occurrence Download

description: A dataset containing 2213 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Emberiza yessoensis)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 2213 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051919-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kec99g
title: Occurrence Download

description: A dataset containing 8852 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Empidonax albigularis)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 8852 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051920-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29632967.v5
title: A Unified Wave Theory Of Physics

description: Unified Wave Theory of PhysicsThe Unified Wave Theory is a novel framework unifying quantum mechanics, the Standard Model (SM), gravity, and cosmology via a two-component scalar field ( \Phi = (\Phi_1, \Phi_2) ) with a non-collapse Born rule. Revised from a single-scalar model, it achieves a 98% fit (2–5 sigma) across:<br><b>Quantum Mechanics</b>: 5 sigma for double-slit, uncertainty principle (DESY).<b>Standard Model</b>: 5 sigma for QED, 4–5 sigma for electroweak, 3 sigma for QCD (targeting 4 sigma, LHC Run 3), 2 sigma for neutrinos (targeting 3–4 sigma, DUNE).<b>Gravity</b>: Modified metric (98.5%, 2–4 sigma, LISA/EHT testable).<b>Cosmology</b>: Dark energy (5 sigma), dark matter (2 sigma).Improvements include Bayesian parameter fitting using LHC Run 3 (124 fb⁻¹) and DUNE prototype data (2024). The theory addresses SM limitations (neutrino masses, gravity, dark matter/energy) and offers novel predictions (jet anomalies, non-collapse QM, gravity deviations). Data: \url{https://doi.org/10.6084/m9.figshare.29605835}.
DOI: 10.6084/m9.figshare.29649911
title: Dispositivo terapéutico no invasivo basado en fotobiomodulación transcraneal PBM-t: diseño, funcionamiento y aplicaciones clínicas y cosméticas del Casco InfraNeural™ Non-invasive therapeutic device based on PBM-t transcranial photobiomodulation: design, performance and clinical and cosmetic applications of the InfraNeural™ Helmet

description: "El Casco InfraNeural™ es un dispositivo de fotobiomodulación transcraneal (PBM-t), no invasivo, diseñado para aplicar luz roja (630–660 nm) e infrarroja cercana (810–940 nm) sobre regiones específicas del cuero cabelludo y el cráneo. El sistema está orientado al tratamiento complementario de trastornos neurológicos como Alzheimer, Parkinson, demencia frontotemporal, autismo (TEA), depresión, ansiedad, insomnio, migraña, secuelas post-COVID, trastornos de atención, así como para la estimulación cognitiva en adultos mayores.Además de sus aplicaciones clínicas, el Casco InfraNeural™ tiene potencial en el campo del bienestar y la estética, incluyendo la bioestimulación capilar, rejuvenecimiento facial no invasivo y relajación profunda tipo spa.Este dispositivo ha sido creado de manera original por sus autores, quienes cuentan con planos, prototipos funcionales, documentación de diseño e imágenes de pruebas. Esta publicación se realiza con el propósito de proteger la invención bajo el principio de 'defensive publication', impidiendo su patentabilidad posterior por terceros."<br>"The InfraNeural™ Helmet is a non-invasive, transcranial photobiomodulation (PBM-t) device designed to apply red (630-660 nm) and near-infrared (810-940 nm) light to specific regions of the scalp and skull. The system is aimed at complementary treatment of neurological disorders such as Alzheimer's, Parkinson's, frontotemporal dementia, autism (ASD), depression, anxiety, insomnia, migraine, post-COVID sequelae, attention disorders, as well as for cognitive stimulation in older adults.In addition to its clinical applications, the InfraNeural™ Helmet has potential in the field of wellness and aesthetics, including hair biostimulation, non-invasive facial rejuvenation and spa-like deep relaxation.This device has been created in an original way by its authors, who have blueprints, functional prototypes, design documentation and test images. This publication is made for the purpose of protecting the invention under the principle of 'defensive publication', preventing its subsequent patentability by third parties."
DOI: 10.6084/m9.figshare.29649911.v1
title: Dispositivo terapéutico no invasivo basado en fotobiomodulación transcraneal PBM-t: diseño, funcionamiento y aplicaciones clínicas y cosméticas del Casco InfraNeural™ Non-invasive therapeutic device based on PBM-t transcranial photobiomodulation: design, performance and clinical and cosmetic applications of the InfraNeural™ Helmet

description: "El Casco InfraNeural™ es un dispositivo de fotobiomodulación transcraneal (PBM-t), no invasivo, diseñado para aplicar luz roja (630–660 nm) e infrarroja cercana (810–940 nm) sobre regiones específicas del cuero cabelludo y el cráneo. El sistema está orientado al tratamiento complementario de trastornos neurológicos como Alzheimer, Parkinson, demencia frontotemporal, autismo (TEA), depresión, ansiedad, insomnio, migraña, secuelas post-COVID, trastornos de atención, así como para la estimulación cognitiva en adultos mayores.Además de sus aplicaciones clínicas, el Casco InfraNeural™ tiene potencial en el campo del bienestar y la estética, incluyendo la bioestimulación capilar, rejuvenecimiento facial no invasivo y relajación profunda tipo spa.Este dispositivo ha sido creado de manera original por sus autores, quienes cuentan con planos, prototipos funcionales, documentación de diseño e imágenes de pruebas. Esta publicación se realiza con el propósito de proteger la invención bajo el principio de 'defensive publication', impidiendo su patentabilidad posterior por terceros."<br>"The InfraNeural™ Helmet is a non-invasive, transcranial photobiomodulation (PBM-t) device designed to apply red (630-660 nm) and near-infrared (810-940 nm) light to specific regions of the scalp and skull. The system is aimed at complementary treatment of neurological disorders such as Alzheimer's, Parkinson's, frontotemporal dementia, autism (ASD), depression, anxiety, insomnia, migraine, post-COVID sequelae, attention disorders, as well as for cognitive stimulation in older adults.In addition to its clinical applications, the InfraNeural™ Helmet has potential in the field of wellness and aesthetics, including hair biostimulation, non-invasive facial rejuvenation and spa-like deep relaxation.This device has been created in an original way by its authors, who have blueprints, functional prototypes, design documentation and test images. This publication is made for the purpose of protecting the invention under the principle of 'defensive publication', preventing its subsequent patentability by third parties."
DOI: 10.15468/dl.bxxr5y
title: Occurrence Download

description: A dataset containing 185 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Jasminum fluminense",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 185 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051921-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7fkz7j
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Camellia sinensis",
 "Country is Tanzania, United Republic of",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051922-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12585892
title: Antutu Benchmark
DOI: 10.15468/dl.nc726f
title: Occurrence Download

description: A dataset containing 409 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cenchrus clandestinus",
 "Country is Israel",
 "HasCoordinate is true"
 ]
}

 The dataset includes 409 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051924-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hjx5cz
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euphorbia maculata",
 "Country is Liechtenstein",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051923-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yxq9kv
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euphorbia maculata",
 "Country is Malta",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051926-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vmy466
title: Occurrence Download

description: A dataset containing 161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cenchrus clandestinus",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 161 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051925-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15227386
title: Reference data for Toptica TeraFlash pro

description: Three sets of 100 THz-TDS waveforms obtained with a TOPTICA TeraFlash pro system.

Measurement details:



High bandwidth antennas

2-mirror transmission THz optical configuration

Path length: 15–20 cm

Trace length: 50 ps

Dry air purging

100 consecutive waveforms, no averaging or windowing

Recording time: ≈ 5 s for 100 waveforms

All measurements sampled at a 0.05 ps interval


Data sets:



Constant purging with dry air flow switched on

Repetition of Measurement 1

Measurement in dry air atmosphere, but with air flow switched off
DOI: 10.5281/zenodo.15227385
title: Reference data for Toptica TeraFlash pro

description: Three sets of 100 THz-TDS waveforms obtained with a TOPTICA TeraFlash pro system.

Measurement details:



High bandwidth antennas

2-mirror transmission THz optical configuration

Path length: 15–20 cm

Trace length: 50 ps

Dry air purging

100 consecutive waveforms, no averaging or windowing

Recording time: ≈ 5 s for 100 waveforms

All measurements sampled at a 0.05 ps interval


Data sets:



Constant purging with dry air flow switched on

Repetition of Measurement 1

Measurement in dry air atmosphere, but with air flow switched off
DOI: 10.15468/dl.cduyk2
title: Occurrence Download

description: A dataset containing 52298 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Emberiza spodocephala)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 52298 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051894-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v3w6p5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dalbergia sissoo",
 "Country is Tanzania, United Republic of",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051930-250717081556266/datasets/export for details.
DOI: 10.15468/dl.d8p2jp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dalbergia sissoo",
 "Country is Türkiye",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051931-250717081556266/datasets/export for details.
DOI: 10.15468/dl.afhv3n
title: Occurrence Download

description: A dataset containing 112 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dalbergia sissoo",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 112 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051932-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4tsz3h
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Passiflora foetida",
 "Country is Bahamas",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051933-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6cwwnf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euphorbia maculata",
 "Country is Moldova, Republic of",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051935-250717081556266/datasets/export for details.
DOI: 10.5281/zenodo.16459492
title: Wind-Nudging Data for Schenider et. al. 2025: Antarctic Snow Fall

description: Dataset for CESM2 Wind nudging experiments used in Schneider et. al. 2025 (Antarctic Snow Fall)
DOI: 10.5281/zenodo.16459493
title: Wind-Nudging Data for Schenider et. al. 2025: Antarctic Snow Fall

description: Dataset for CESM2 Wind nudging experiments used in Schneider et. al. 2025 (Antarctic Snow Fall)
DOI: 10.15468/dl.c4ee3j
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euphorbia maculata",
 "Country is Marshall Islands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051934-250717081556266/datasets/export for details.