DOI: 10.5061/dryad.1rn8pk0zf
title: Data from: Protected areas not likely to serve as steppingstones for species undergoing climate-induced range shifts

description: Species across the planet are shifting their ranges to track suitable
 climate conditions in response to climate change. Given that protected
 areas have higher quality habitat and often harbor higher levels of
 biodiversity compared to unprotected lands, it is often assumed that
 protected areas can serve as steppingstones for species undergoing
 climate-induced range shifts. However, there are several factors that may
 impede successful range shifts among protected areas, including the
 distance that must be travelled, unfavorable human land uses and climate
 conditions along potential movement routes, and lack of analogous
 climates. Through a species-agnostic lens, we evaluate these factors
 across the global terrestrial protected area network as measures of
 climate connectivity, which is defined as the ability of a landscape to
 facilitate or impede climate-induced movement. We found that over half of
 protected land areas and two-thirds of the number of protected units
 across the globe are at risk of climate connectivity failure, casting
 doubt on whether many species can successfully undergo climate-induced
 range shifts among protected areas. Consequently, protected areas are
 unlikely to serve as steppingstones for a large number of species under a
 warming climate. As species disappear from protected areas without
 commensurate immigration of species suited to the emerging climate (due to
 climate connectivity failure), many protected areas may be left with a
 depauperate suite of species under climate change. Our findings are highly
 relevant given recent pledges to conserve 30% of the planet by 2030
 (30x30), underscore the need for innovative land management strategies
 that allow for species range shifts, and suggest that assisted
 colonization may be necessary to promote species that are adapted to the
 emerging climate.
description: <em>Identifying climate
 analogs</em> We
 followed the methods of Abatzoglou et al. (2020) and Parks et al. (2022)
 to characterize climate and identify backward and forward climate analogs.
 The specific climate variables we used were average minimum temperature of
 the coldest month (T<sub>min</sub>), average maximum
 temperature of the warmest month (T<sub>max</sub>), annual
 actual evapotranspiration (AET), and annual climate water deficit (CWD).
 AET and CWD
 concurrently account for evaporative demand and availability of water
 (N. L. Stephenson, 1990). These four variables
 provide complementary information pertinent to ecological systems
 and collectively capture the major climatic constraints on
 species distributions and ecological processes across a range of taxa
 (Dobrowski et al., 2021; Lutz et al., 2010; Parker & Abatzoglou,
 2016; N. Stephenson, 1998; C. M. Williams et al., 2015). Monthly data
 acquired from TerraClimate (Abatzoglou et al., 2018) were used to produce
 these annual summaries from 1961-1990 (resolution = ~4km), which were then
 averaged over the same time period to represent reference period climate
 normals. The reference time period (1961–1990) is meant to represent
 climate conditions and climate niches prior to the bulk of recent warming.
 Future climate conditions were also computed from TerraClimate (available
 from www.climatologylab.org/terraclimate.html) and correspond to a 2°C increase above pre-industrial levels that are likely to manifest by mid-21<sup>st</sup> century without immediate and massive changes in global climate policies (Friedlingstein et al., 2014). As with the reference period climate, we summarized the four +2°C climate metrics annually and over a 30-year time period to represent future climate normals. All analyses in this study were conducted in the R statistical platform (R Core Team, 2020). We identified backwards and forwards analogs by estimating the climatic dissimilarity between each protected focal pixel (resolution = ~4km to match gridded climate data) and all protected pixels within a 500-km radius using a standardized Mahalanobis distance (Mahony et al., 2017). We chose the 500-km search radius as it encompasses an <em>upper</em> range of dispersal for some terrestrial animals and plants (Chen et al., 2011) when assuming 2°C warming by the mid-21<sup>st</sup> century; this search radius has also been used in previous studies (Bellard et al., 2014; Parks et al., 2022; J. W. Williams et al., 2007). The Mahalanobis distance metric synthesized the four climate variables (i.e. T<sub>min</sub>, T<sub>max</sub>, AET, and CWD; fig. 2a) by measuring distance in multivariate space away from a centroid using principal components analysis of standardized anomalies. Mahalanobis distance scales multivariate mean climate conditions between a pixel and those within the search radius by the focal pixel’s covariance and magnitude of interannual climate variability (ICV) across the four metrics. For backwards analogs, we characterized +2°C ICV and reference period climate normals to calculate climatic dissimilarity; for forward analogs, we used reference period ICV and +2°C climatic normals to calculate climatic dissimilarity. We standardized Mahalanobis distance to account for data dimensionality by calculating a multivariate z-score (σ<sub>d</sub>) based on a Chi distribution (Mahony et al., 2017). σ<sub>d</sub> represents the climate similarity between each focal pixel and its candidate backward and forward analogs (i.e. all other protected terrestrial pixels within 500 km), and we considered any protected pixels with σ<sub>d</sub> ≤ 0.5 as climate analogs (fig. 2b) (following Parks et al., 2022). We were unable to calculate Mahalanobis distance when there was no ICV for any one of the four variables, and as a consequence, these areas are omitted from all analyses; this affects, for example, a relatively small tropical area in South America (CWD=0 each year) and areas perennially covered by snow (CWD=0 each year; e.g. most of Greenland). We focused our analyses on protected areas as defined by the World Database on Protected Areas (WDPA) (IUCN & UNEP-WCMC, 2019) and included protected areas classified as IUCN (International Union of Conservation for Nature) Management Categories I-VI, except those identified as ‘proposed’, ‘marine’, or otherwise aquatic (e.g. wetland, riverine, endorheic). A large number of protected areas, however, were not assigned an IUCN category in the WDPA (identified as ‘Not Reported’, ‘Not Assigned’, or ‘Not Applicable’) but are likely to have reasonably high levels of protection (e.g. Kruger National Park in South Africa). We included these additional protected areas if the level of human modification was similar or less than that observed within IUCN category I-VI protected areas. To do so, we measured mean land-use intensity within each IUCN category I-VI protected area using the Human Modification Gradient (HMG) raster dataset (Kennedy et al., 2019) and calculated the 80<sup>th</sup> percentile of the resulting distribution. Any unassigned protected areas with a mean HMG less than or equal to this identified threshold were included in our study (following Dobrowski et al., 2021). We then converted this vector-based polygon dataset to raster format (resolution = ~4km to match gridded climate data; n=1,063,748 pixels). It is well-recognized that the WDPA contains a large number of duplicate and overlapping polygons (Palfrey et al., 2022; Vimal et al., 2021). Although this does not affect summaries across the globe or for individual countries (described below), it provides a challenge when trying to summarize by individual protected areas (due to double-counting). Consequently, we ‘cleaned’ the WDPA prior to summarizing the climate connectivity metrics for individual protected areas by removing polygons that exhibited ≥ 90% overlap with another; this resulted in 29,752 individual protected areas (available in the Electronic Supplemental Material). <em>Least-cost path modelling</em> Following Dobrowski and Parks (2016) and Carroll et al. (2018), we used least-cost path modelling (Adriaensen et al. 2003) to build potential climate-induced movement routes between each protected focal pixel and its backward and forward analogs. The least-cost models were parameterized with resistance surfaces based on climate dissimilarity and the human modification gradient (HMG) (Kennedy et al., 2019). For backward analog modelling, we characterized climatic dissimilarity (i.e. climatic resistance) using two intermediate surfaces, the first being the Mahalanobis distance between each focal pixel (using +2°C ICV) and all other pixels using reference period climate normals (fig. 2c) and the second being the Mahalanobis distance (using +2°C ICV) and all other pixels using +2°C climate normals (fig. 2d). These two surfaces provide a proxy for climate similarity designed to capture transient changes between the reference period and +2°C climate; these were then averaged to characterize the overall climatic resistance across time and space (fig. 2d). For forward analog modelling, the process is similar except we used reference period ICV when characterizing climatic resistance (fig. 2a-2d). We then multiplied the climatic resistance (fig. 2d) by HMG (fig. 2e) to create the final resistance surface for least-cost path modeling (cf. Parks et al., 2020). Prior to this step, we rescaled HMG from its native range (0–1) to 1–25 to correspond with the range of Mahalanobis distance values and thereby grant comparable weights to climatic resistance and HMG resistance (~95% of all Mahalanobis distance values are below 25 within a 500km radius). Open water was given a resistance=25 so that paths would avoid water when possible. Least-cost path modelling was achieved using the <em>gdistance</em> package (van Etten, 2017); paths represent the least accumulated cost across the final resistance surface (fig. 2f) between each focal pixel and analog (fig. 2g). Because paths were rarely straight lines, some were longer than the 500km that we established as a search radius. We removed these longer paths to abide by the biologically informed upper dispersal constraint. <em>Calculating climate connectivity metrics and climate connectivity failure</em> We calculated the length (i.e. dispersal exposure), land-use modification (i.e. human exposure), and climatic resistance (i.e. climate exposure) for each path, remembering that each focal pixel may have many analogs and resultant paths. Human exposure represents cumulative HMG (fig. 2e) across all pixels in a path and climate exposure represents cumulative climate resistance (fig. 2d) along a path. Human exposure and climate exposure were calculated by multiplying the mean HMG (unscaled; fig. 2f) and mean climate resistance (fig. 2d) along each path by the length of each path, respectively. Each path’s climate connectivity metric (dispersal, human, and climate exposure) was converted to a percentile (range = 0–100) to facilitate easier interpretation and comparison among metrics; relative to other protected pixels, small percentiles represent low exposure and large percentiles represent elevated exposure. We summarized (i.e. averaged the percentiles) dispersal exposure, human exposure, and climate exposure across each protected focal pixel (again, remembering that each pixel may have multiple analogs and resultant paths). Our fourth climate connectivity metric, analog exposure, can’t be summarized on a per-path basis, because by definition, there is no least-cost path when there are no protected climate analogs. Instead, protected pixels either do or do not have protected climate analogs. Focal pixels were identified as exhibiting climate connectivity failure when they exceeded the 75<sup>th</sup> percentile for dispersal or climate exposure, exceeded the 90<sup>th</sup> percentile for human exposure, or had no protected climate analog. We assumed that focal pixels exceeding these percentiles are located in landscapes that hinder successful range shifts among protected areas (i.e. climate connectivity failure) for a non-negligible proportion of extant species, considering that the biodiversity at a given site comprises mammals, birds, insects, mollusks, amphibians, reptiles, fish, crustaceans, annelids, vascular plants (e.g. trees grasses, shrubs), and non-vascular plants (e.g. fungi, mosses, lichens). The numerous and diverse species at a given site have a wide range of dispersal abilities, sensitivities to human land uses, and climatic tolerances. We used a higher threshold (90<sup>th</sup> percentile) for describing climate connectivity failure due to human exposure because large, remote protected areas in the network skew human exposure towards lower values from a global perspective. These percentile thresholds are likely conservative when considering the large number and diversity of species at a given site. In terms of dispersal, for example, many species have maximum dispersal capabilities on the range of 1 km/year or less (Jenkins et al., 2007; McLachlan et al., 2005; Schwartz et al., 2001). This represents dispersal of 75 km under 2°C warming in the 75 years covering the midpoint of the reference period (1975) to mid-21<sup>st</sup> century. In our study, the 75<sup>th</sup> percentile path length, corresponding to dispersal exposure, is ~385 km, well above such dispersal limits, supporting our assertion that the 75<sup>th</sup> percentile is conservative for estimating climate connectivity failure. Furthermore, the mean HMG value for a 100km path at the 90<sup>th</sup> percentile threshold is 0.22, which is well above the 0.1 threshold that Brennen et al. (2022) used to identify areas moderately to highly impacted by human land-uses. Lastly, the mean climatic distance for a 100km path at the 75<sup>th</sup> percentile is well over two standard deviations different, on average, from the focal pixel and analog. We report the percent of protected pixels across the globe and within each country that exhibits climate connectivity failure. We also assessed the potential for each of the 29,752 individual protected areas (e.g. Yellowstone National Park, Serengeti National Park) to undergo climate connectivity failure using a slightly different method. To do so, we calculated the mean percentile among pixels within each protected area for each of dispersal exposure, human exposure, and climate exposure (each metric was averaged across a protected area; the metrics themselves were not averaged with each other). We then calculated the percent of each protected area that did not have a protected climate analog (analog exposure). Although a binary approach (has or does not have an analog) is appropriate when evaluating individual focal pixels, a percent-based valuation is most appropriate and informative when evaluating individual protected areas with up to thousands of pixels. Individual protected areas exhibited climate connectivity failure if the mean dispersal exposure or climate exposure exceeded the 75th percentile, mean human exposure exceeded the 90<sup>th</sup> percentile, or the analog exposure exceeded 75%. <em>References</em> Abatzoglou, J. T., Dobrowski, S. Z., & Parks, S. A. (2020). 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description: There are three files in this repository: 1)      backward.analogs -
 master.table.xlsx – results for backward analogs: ·         Each climate
 connectivity metric (dispersal exposure, human exposure, climate exposure,
 and analog exposure) is summarized by country; percent
 protected lands in each country that exhibit climate connectivity failure
 is also indicated.   ·         Each climate
 connectivity metric (dispersal exposure, human exposure, climate exposure,
 and analog exposure) is summarized by protected area. Values represent the
 mean pixel-based percentile. Also included is a binary (0, 1) indicator of
 whether the protected area exhibits climate connectivity
 failure. 2)      forward.analogs -
 master.table.xlsx – results for forward analogs: ·         Each climate
 connectivity metric (dispersal exposure, human exposure, climate exposure,
 and analog exposure) is summarized by country; percent
 protected lands in each country that exhibit climate connectivity failure
 is also indicated.   ·         Each climate
 connectivity metric (dispersal exposure, human exposure, climate exposure,
 and analog exposure) is summarized by protected area. Values represent the
 mean pixel-based percentile. Also included is a binary (0, 1) indicator of
 whether the protected area exhibits climate connectivity
 failure. 3)      PA_shapefile - cleaned.zip: This
 is the ‘cleaned’ (see Methods) protected area shapefile we used as a way
 to summarize dispersal exposure, human exposure, climate exposure, and
 analog exposure for each protected area.  Note that two
 of these files are Microsoft Excel; they should be accessible via
 LibreOffice and R and potentially other open-source
 alternatives.