cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.745jv8
title: Occurrence Download

description: A dataset containing 472 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dalbergia retusa Hemsl."
 ]
}

 The dataset includes 472 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082746-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kkllck
title: Occurrence Download

description: A dataset containing 412 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Otala punctata (O.F.Müller, 1774)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 412 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009061-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sy5yxr
title: Occurrence Download

description: A dataset containing 5069 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Atlas de los coleóptera Scarabaeoidea de México. Segunda parte"
 ]
}

 The dataset includes 5069 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009061-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r9lbu3
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saurauia actinidiifolia Stapf"
 ]
}

 The dataset includes 40 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009294-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3zxhna
title: Occurrence Download

description: A dataset containing 2517 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Freshwater fishes of Greece",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2517 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072125-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28816742
title: Dataset & Readme for the study: "Influence of Workplace-Integrated Exercise Snacks on Cognitive Performance in Sedentary Middle-Aged Adults – a Randomized Controlled Trial"

description: In this study, the acute and chronic effects of workplace-integrated exercise snacks, i.e., short, vigorous bouts of exercise, on cognitive performance in middle-aged adults were investigated.
DOI: 10.6084/m9.figshare.28816742.v2
title: Dataset & Readme for the study: "Influence of Workplace-Integrated Exercise Snacks on Cognitive Performance in Sedentary Middle-Aged Adults – a Randomized Controlled Trial"

description: In this study, the acute and chronic effects of workplace-integrated exercise snacks, i.e., short, vigorous bouts of exercise, on cognitive performance in middle-aged adults were investigated.
DOI: 10.6084/m9.figshare.28816742.v1
title: Dataset & Readme for the study: "Influence of Workplace-Integrated Exercise Snacks on Cognitive Performance in Sedentary Middle-Aged Adults – a Randomized Controlled Trial"

description: In this study, the acute and chronic effects of workplace-integrated exercise snacks, i.e., short, vigorous bouts of exercise, on cognitive performance in middle-aged adults were investigated.
DOI: 10.6084/m9.figshare.26633301.v1
title: Additional file 3 of Frequency of subclinical interstitial lung disease in COVID-19 autopsy cases: potential risk factors of severe pneumonia

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26751016
title: Data for "Push-pull tests to measure residual non-aqueous phase liquid saturation based on interphase mass transfer."

description: Pore- and continuum-scale modeling data.
DOI: 10.6084/m9.figshare.26751016.v1
title: Data for "Push-pull tests to measure residual non-aqueous phase liquid saturation based on interphase mass transfer."

description: Pore- and continuum-scale modeling data.
DOI: 10.15468/dl.cnzayj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((146.990581 -33.427004, 146.990581 -33.42925, 146.988335 -33.42925, 146.988335 -33.431496, 146.990581 -33.431496, 146.990581 -33.435987, 146.992827 -33.435987, 146.992827 -33.427004, 146.990581 -33.427004))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068845-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26583339
title: Additional file 2 of A robust reprogramming strategy for generating hepatocyte-like cells usable in pharmaco-toxicological studies

description: Additional file 2. Supplementary Tables S1–S4.
DOI: 10.15468/dl.c8kqxg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.00181 -33.427004, 147.00181 -33.433742, 147.004056 -33.433742, 147.004056 -33.427004, 147.00181 -33.427004))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068846-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26583456
title: Additional file 1 of Genome-environment associations along elevation gradients in two snowbed species of the North-Eastern Calcareous Alps

description: Additional file 1: Table S1. Environmental variables characterizing populations of A) Achillea clusiana and B) Campanula pulla analyzed in the study. MAT… mean annual temperature, T… temperature.
DOI: 10.6084/m9.figshare.26583474
title: Additional file 7 of Genome-environment associations along elevation gradients in two snowbed species of the North-Eastern Calcareous Alps

description: Additional file 7: Table S7. Pearson correlation coefficients between environmental variables of nine populations of Achillea clusiana (upper diagonal) and Campanula pulla (lower diagonal) in the Northeastern Calcareous Alps. Climate variables were downscaled from CHELSA data 1979–2013. MAT… mean annual temperature, T… temperature.
DOI: 10.6084/m9.figshare.26583390.v1
title: Additional file 1 of AI literacy in K-12: a systematic literature review

description: Additional file 1. Additional listing.
DOI: 10.15468/dl.npcdux
title: Occurrence Download

description: A dataset containing 191 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "PublishingOrg is one of (eac88d99-9f6c-4031-8fc4-8088f0e0dfe7, 2a7e3080-28a9-11dd-97cd-b8a03c50a862, 485ff490-e3b7-11db-9acc-b8a03c50a862, 06f46c98-9794-4d96-a014-aecdf24dbd7e)",
 "TaxonKey is Quadrella odoratissima (Jacq.) Hutch."
 ]
}

 The dataset includes 191 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068848-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vt2bke
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.602445 -33.427004, 149.602445 -33.433742, 149.604691 -33.433742, 149.604691 -33.431496, 149.609183 -33.431496, 149.609183 -33.427004, 149.602445 -33.427004))"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068847-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wxzywb
title: Occurrence Download

description: A dataset containing 1054696 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2024-06-20",
 "EventDate is less than or equal to 2024-07-20",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 1054696 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068829-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26583462.v1
title: Additional file 3 of Genome-environment associations along elevation gradients in two snowbed species of the North-Eastern Calcareous Alps

description: Additional file 3: Table S3. Per sample and species summary statistics of the sequencing data and after each of the five filtering steps. Columns show basecount, readcount, % of bases left, % of reads left. Filter1 is demultiplexing, filter2 is adapter removal, filter3 is trimming of ApeKI cutting enzyme overhangs (CWG), filter4 is removal of overrepresented sequences and filter5 is trimming to 90 nt.
DOI: 10.6084/m9.figshare.26583459
title: Additional file 2 of Genome-environment associations along elevation gradients in two snowbed species of the North-Eastern Calcareous Alps

description: Additional file 2: Table S2. Minimum, maximum and average number of reads in million left per sample after the different filtering steps per species and in total. Filter1 is demultiplexing, filter2 is removing adapter sequences, filter3 is removing ApeKI restriction enzyme overhangs (CWG), filter4 is removing reads with overrepresented sequences as identified with FastQC and filter5 is trimming reads to 90 nt length such that they can be used with Stacks.
DOI: 10.15468/dl.vdxreq
title: Occurrence Download

description: A dataset containing 249076 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "SpeciesKey is Sturnella neglecta Audubon, 1844",
 "HasCoordinate is TRUE",
 "Year is 2023"
 ]
}

 The dataset includes 249076 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068841-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26583558
title: Additional file 2 of PAUSE: principled feature attribution for unsupervised gene expression analysis

description: Additional file 2. Table S1 (ranked list of pathways for the 664 brain expression samples with associated AB IHC protein density measurements).
DOI: 10.6084/m9.figshare.26583558.v1
title: Additional file 2 of PAUSE: principled feature attribution for unsupervised gene expression analysis

description: Additional file 2. Table S1 (ranked list of pathways for the 664 brain expression samples with associated AB IHC protein density measurements).
DOI: 10.6084/m9.figshare.26583561
title: Additional file 3 of PAUSE: principled feature attribution for unsupervised gene expression analysis

description: Additional file 3. Table S2 (list of all enriched pathways for the principal components and latent variables in panels c and d of Fig. S1).
DOI: 10.6084/m9.figshare.26583561.v1
title: Additional file 3 of PAUSE: principled feature attribution for unsupervised gene expression analysis

description: Additional file 3. Table S2 (list of all enriched pathways for the principal components and latent variables in panels c and d of Fig. S1).
DOI: 10.15468/dl.weyf7k
title: Occurrence Download

description: A dataset containing 5060 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.548546 -33.42925, 149.548546 -33.431496, 149.550792 -33.431496, 149.550792 -33.42925, 149.548546 -33.42925))"
 ]
}

 The dataset includes 5060 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068849-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26583468
title: Additional file 5 of Genome-environment associations along elevation gradients in two snowbed species of the North-Eastern Calcareous Alps

description: Additional file 5: Table S5. Summary statistics of the Stacks analysis per population. Average values per species and of populations from each elevation and mountain per species and in total are given. The number of polymorphic sites and private alleles are listed as well as several population genetics statistics: observed and expected heterozygosity (HI and HS), nucleotide diversity (π) and inbreeding coefficient (FIS). The other six columns show the number of polymorphic loci and sites and private alleles after each of the two variant filtering steps. First it was filtered for genotype quality and read depth. The second filter included removal of duplicated Stacks loci.
DOI: 10.15468/dl.mmfdfq
title: Occurrence Download

description: A dataset containing 1302 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Occurrence evidence, Human Observation)",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Sceloporus cyanogenys Cope, 1885"
 ]
}

 The dataset includes 1302 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068851-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a7rtzh
title: Occurrence Download

description: A dataset containing 856 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Fish species occurrences in the rivers of the Lake Victoria Basin Kenya, digitized from the Ichthyology specimen collection at the National Museums of Kenya"
 ]
}

 The dataset includes 856 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068853-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gnbf5u
title: Occurrence Download

description: A dataset containing 4793 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Byrsonima coccolobifolia Kunth, Byrsonima sessilifolia Benth.)"
 ]
}

 The dataset includes 4793 records from 161 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068852-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26583525.v1
title: Additional file 5 of Genome-wide analysis of UDP-glycosyltransferases family and identification of UGT genes involved in abiotic stress and flavonol biosynthesis in Nicotiana tabacum

description: Additional file 5: Table S5. Gene Ontology (GO) terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) biochemical pathways associated with NtUGTs.
DOI: 10.6084/m9.figshare.26583459.v1
title: Additional file 2 of Genome-environment associations along elevation gradients in two snowbed species of the North-Eastern Calcareous Alps

description: Additional file 2: Table S2. Minimum, maximum and average number of reads in million left per sample after the different filtering steps per species and in total. Filter1 is demultiplexing, filter2 is removing adapter sequences, filter3 is removing ApeKI restriction enzyme overhangs (CWG), filter4 is removing reads with overrepresented sequences as identified with FastQC and filter5 is trimming reads to 90 nt length such that they can be used with Stacks.
DOI: 10.15468/dl.576hbh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.302747 -33.431496, 147.302747 -33.435987, 147.309485 -33.435987, 147.309485 -33.433742, 147.31173 -33.433742, 147.31173 -33.431496, 147.302747 -33.431496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068854-240626123714530/datasets/export for details.
DOI: 10.15468/dl.ajz2z7
title: Occurrence Download

description: A dataset containing 805150 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Argentina",
 "OccurrenceStatus is Present",
 "Year 1940-2010"
 ]
}

 The dataset includes 805150 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068843-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bft87v
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.541809 -33.431496, 149.541809 -33.433742, 149.5463 -33.433742, 149.5463 -33.431496, 149.541809 -33.431496))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068856-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26583456.v1
title: Additional file 1 of Genome-environment associations along elevation gradients in two snowbed species of the North-Eastern Calcareous Alps

description: Additional file 1: Table S1. Environmental variables characterizing populations of A) Achillea clusiana and B) Campanula pulla analyzed in the study. MAT… mean annual temperature, T… temperature.
DOI: 10.6084/m9.figshare.26583462
title: Additional file 3 of Genome-environment associations along elevation gradients in two snowbed species of the North-Eastern Calcareous Alps

description: Additional file 3: Table S3. Per sample and species summary statistics of the sequencing data and after each of the five filtering steps. Columns show basecount, readcount, % of bases left, % of reads left. Filter1 is demultiplexing, filter2 is adapter removal, filter3 is trimming of ApeKI cutting enzyme overhangs (CWG), filter4 is removal of overrepresented sequences and filter5 is trimming to 90 nt.
DOI: 10.6084/m9.figshare.26583465.v1
title: Additional file 4 of Genome-environment associations along elevation gradients in two snowbed species of the North-Eastern Calcareous Alps

description: Additional file 4: Table S4. Summary statistics of the Stacks analysis per sample and species. Columns show the number of input reads used to run Stacks per sample and in total per species, the number of stacks generated by Stacks (ustacks) and the stacks coverage per sample and on average per species and the per sample min., average, max. and SD per species.
DOI: 10.6084/m9.figshare.26583465
title: Additional file 4 of Genome-environment associations along elevation gradients in two snowbed species of the North-Eastern Calcareous Alps

description: Additional file 4: Table S4. Summary statistics of the Stacks analysis per sample and species. Columns show the number of input reads used to run Stacks per sample and in total per species, the number of stacks generated by Stacks (ustacks) and the stacks coverage per sample and on average per species and the per sample min., average, max. and SD per species.
DOI: 10.6084/m9.figshare.26583468.v1
title: Additional file 5 of Genome-environment associations along elevation gradients in two snowbed species of the North-Eastern Calcareous Alps

description: Additional file 5: Table S5. Summary statistics of the Stacks analysis per population. Average values per species and of populations from each elevation and mountain per species and in total are given. The number of polymorphic sites and private alleles are listed as well as several population genetics statistics: observed and expected heterozygosity (HI and HS), nucleotide diversity (π) and inbreeding coefficient (FIS). The other six columns show the number of polymorphic loci and sites and private alleles after each of the two variant filtering steps. First it was filtered for genotype quality and read depth. The second filter included removal of duplicated Stacks loci.
DOI: 10.15468/dl.mnf4dg
title: Occurrence Download

description: A dataset containing 34780724 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 34780724 records from 5229 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068844-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9sn7mx
title: Occurrence Download

description: A dataset containing 6656 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera tigris (Linnaeus, 1758)"
 ]
}

 The dataset includes 6656 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019352-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14172404
title: Optical imaging and single-cell RNA sequencing  reveal individual heterogeneity in pancreatic cells that supports global function

description: Our study investigated the heterogeneity in glucose-induced excitability within islet cells, providing a cellular basis for their roles in glucose-responsive hormone secretion. To comprehensively map glucose-induced excitability profiles, we developed SHIMMER, a high-throughput, multimodal data acquisition platform that integrates electrical signals, Ca2+ fluxes, and single-cell sequencing data. By quantifying the non-stationary electrical and calcium signal dynamics, we formulated a machine learning-based electro-calcium model that shows how variations in membrane conductance and Ca2+ clearance contribute to increased heterogeneity in cytosolic Ca2+ accumulation. Using SHIMMER for single-cell sequencing on representative cells, we identified several genes that associated with electro-calcium characteristics, and found a potential marker for a highly excitable cell subpopulation. These findings indicate that islet cells tend to exhibit a large heterogeneity in glucose-induced excitability, being essential for their normal functioning.

This dataset include all processed data we mentioned in our paper, the code were uploaded on https://github.com/CullinanLi/heterogeneity-in-pancreatic-islet-cells, with the same folder name, if we missed anything, please feel free to contact the lead contact.