cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.8t4cuv
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "Country is United States of America",
 "Geometry POLYGON((-71.31661 44.21267,-71.25983 44.21267,-71.25983 44.34075,-71.31661 44.34075,-71.31661 44.21267))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Boloria titania (Esper, 1793)"
 ]
}

 The dataset includes 12 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021869-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yfixqr
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nasalis larvatus (van Wurmb, 1787)",
 {
 "or" : [
 "Country is Malaysia",
 "Country is Indonesia"
 ]
 },
 "HasCoordinate is true"
 ]
}

 The dataset includes 60 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025372-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vq7ycr
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Habenaria foxii Ridl."
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015359-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.14706867
title: gga_mirnOME | microRNA-seq | miRNA Expression dataset from chick embryonic tissues

description: This dataset is associated with the following publication:Isabel Duarte, Gil Carraco, Nayara T. D. de Azevedo, Vladimir Benes, and Raquel P. Andrade. gga_mirnOME, A microRNA-sequencing dataset from chick embryonic tissues. 2021. (10.1038/s41597-022-01126-7).The dataset is composed by <b>1 excel file </b>containing the expression values from <i>Gallus gallus</i> known miRNAs from 3 chick embryo development tissues: Undetermined PSM (PSM_U), Determined PSM (PSM_D), and Limb Bud (Limb).<b>File A</b>. gga_mirnOME-data_citation2-mean_log2_normCounts.xls | <b>Expression values of known </b><b><i>Gallus gallus</i></b><b> miRNAs</b> (log2 normalized counts) | Data citation 2
DOI: 10.6084/m9.figshare.14706867.v2
title: gga_mirnOME | microRNA-seq | miRNA Expression dataset from chick embryonic tissues

description: This dataset is associated with the following publication:Isabel Duarte, Gil Carraco, Nayara T. D. de Azevedo, Vladimir Benes, and Raquel P. Andrade. gga_mirnOME, A microRNA-sequencing dataset from chick embryonic tissues. 2021. (10.1038/s41597-022-01126-7).The dataset is composed by <b>1 excel file </b>containing the expression values from <i>Gallus gallus</i> known miRNAs from 3 chick embryo development tissues: Undetermined PSM (PSM_U), Determined PSM (PSM_D), and Limb Bud (Limb).<b>File A</b>. gga_mirnOME-data_citation2-mean_log2_normCounts.xls | <b>Expression values of known </b><b><i>Gallus gallus</i></b><b> miRNAs</b> (log2 normalized counts) | Data citation 2
DOI: 10.15468/dl.f5grmv
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Histiotus montanus (Philippi & Landbeck, 1861)",
 "Country is Peru",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 16 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025373-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.14706867.v1
title: gga_mirnOME | microRNA-seq | miRNA Expression datasets from chick embryonic tissues

description: This dataset is associated with the following publication:Isabel
 Duarte, Gil Carraco, Nayara T. D. de Azevedo, Vladimir Benes, and 
Raquel P. Andrade. gga_mirnOME, A microRNA-sequencing dataset from chick
 embryonic tissues. 2021. (<i>Submitted</i>)<br><br>The dataset is composed by <b>2 excel files </b>containing the expression values from <i>Gallus gallus</i> miRNAs from 3 chick 
embryo development tissues: Undetermined PSM (PSM_U), Determined PSM (PSM_D), and Limb 
Bud (Limb).<b>File A</b>. gga_mirnOME-data_citation2-mean_log2_normCounts.xls | <b>Expression values of known <i>Gallus gallus</i> miRNAs</b> (log2 normalized counts) | Data citation 2<br><b>File B</b>. gga_mirnOME-data_citation3-predicted_novel_mirnas_exprs_hairpinSeq.xlsx | <b>Expression values of novel/predicted <i>Gallus gallus</i> miRNAs</b> (log2 normalized counts). This file also contains the novel miRNA sequences. | Data citation 3<br>
DOI: 10.15468/dl.se6bbz
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aphelenchoides fujianensis Zhuo, Cui, Ye, Luo, Wang, Hu & Liao, 2010"
 ]
}

 The dataset includes 20 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021270-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8bzbz3
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Protopolybia chartergoides (Gribodo, 1891)",
 "Year 1970-2024"
 ]
}

 The dataset includes 31 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038531-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yf3nt6
title: Occurrence Download

description: A dataset containing 9065 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hedychium coronarium J.Koenig"
 ]
}

 The dataset includes 9065 records from 374 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015354-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f1hexh
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acosmium nitens (Vogel) Yakovlev",
 "Country is Colombia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 44 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025375-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zqpp2s
title: Occurrence Download

description: A dataset containing 6592 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-50.0",
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is USA.43.19_1",
 "TaxonKey is Plantae",
 "Year 2019-2022"
 ]
}

 The dataset includes 6592 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011693-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cs8mdt
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Habenaria frappieri J.-B.Castillon & P.Bernet"
 ]
}

 The dataset includes 126 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015364-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.we5all
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acanthostracion polygonius Poey, 1876",
 "Country is Colombia"
 ]
}

 The dataset includes 23 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025376-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9nvjav
title: Occurrence Download

description: A dataset containing 160 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "MediaType is Image",
 "OccurrenceStatus is Present",
 "TaxonKey is Aspidosperma olivaceum Müll.Arg."
 ]
}

 The dataset includes 160 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011688-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n7uyeq
title: Occurrence Download

description: A dataset containing 6976 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Grona adscendens (Sw.) H.Ohashi & K.Ohashi"
 ]
}

 The dataset includes 6976 records from 353 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015366-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dhffox
title: Occurrence Download

description: A dataset containing 5280 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nephrolepis cordifolia (L.) C.Presl"
 ]
}

 The dataset includes 5280 records from 162 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025376-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vwvcbz
title: Occurrence Download

description: A dataset containing 241 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "MediaType is Image",
 "OccurrenceStatus is Present",
 "TaxonKey is Aspidosperma polyneuron Müll.Arg."
 ]
}

 The dataset includes 241 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011696-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vz8ebs
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Romanchella pustulata Knight-Jones, 1978",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072731-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.od5dan
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coeligena orina Wetmore, 1953",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 35 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025377-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xt295a
title: Occurrence Download

description: A dataset listing the 215 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Occurrence dataset of birds in the Sihong Hongze Lake Wetland National Nature Reserve,Jiangsu, China"
 ]
}

 The dataset's 215 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019297-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tb62nk
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Grona cordifolia (Harms) H.Ohashi & K.Ohashi"
 ]
}

 The dataset includes 51 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015405-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e0q2tg
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acanthurus bahianus Castelnau, 1855",
 "Country is Colombia"
 ]
}

 The dataset includes 47 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025379-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bxmrsp
title: Occurrence Download

description: A dataset containing 1146947 species occurrences available in GBIF matching the query:
{
 "and" : [
 "FamilyKey is Trochilidae",
 "HasCoordinate is true",
 "Country is Colombia"
 ]
}

 The dataset includes 1146947 records from 581 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015411-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dj9ejn
title: Occurrence Download

description: A dataset containing 4700 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pristimantis w-nigrum (Boettger, 1892)"
 ]
}

 The dataset includes 4700 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020958-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13947134
title: Truth Tables for consistency-checking 3D geological models

description: The Microsoft Excel and PDF representations of the Truth Tables and geo-feature relation exampels  are provided as supplementary information to the GMD publication: 

Consistency-Checking 3D Geological Models

Marion N. Parquer, Eric A. de Kemp, Boyan Brodaric and Michael J. Hillier
DOI: 10.5281/zenodo.13948356
title: Truth Tables for consistency-checking 3D geological models

description: The Microsoft Excel and PDF representations of the Truth Tables and geo-feature relation exampels  are provided as supplementary information to the GMD publication: 

Consistency-Checking 3D Geological Models

Marion N. Parquer, Eric A. de Kemp, Boyan Brodaric and Michael J. Hillier
DOI: 10.5281/zenodo.8057144
title: Truth Tables for consistency-checking 3D geological models

description: The Microsoft Excel and PDF representations of the Truth Tables and geo-feature relation exampels  are provided as supplementary information to the GMD publication: 

Consistency-Checking 3D Geological Models

Marion N. Parquer, Eric A. de Kemp, Boyan Brodaric and Michael J. Hillier
DOI: 10.15468/dl.5j5h5k
title: Occurrence Download

description: A dataset containing 2769 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Geniostoma J.R.Forst. & G.Forst."
 ]
}

 The dataset includes 2769 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020961-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bwqwef
title: Occurrence Download

description: A dataset containing 3884 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Acacia obliquinervia Tindale"
 ]
}

 The dataset includes 3884 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020963-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ujzxg
title: Occurrence Download

description: A dataset containing 1581 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Colección Ornitológica de la Universidad Industrial de Santander"
 ]
}

 The dataset includes 1581 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020965-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tn24a6
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pristimantis yanezi Navarrete, Venegas & Ron, 2016"
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020966-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8yfxn8
title: Occurrence Download

description: A dataset containing 3580 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is Specimen",
 "TaxonKey is one of (Leptactina Hook.f.)"
 ]
}

 The dataset includes 3580 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020968-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13948392
title: Dataset package for the Manuscript "Absence of bulk charge density wave order in the normal state of UTe2"

description: The attached dataset contains raw data, normalized to the respective attenuater, reported in the manusript: 

"Absence of bulk charge density wave order in the normal state of UTe2".

The files "Figure4a.dat", "Figure4b.dat", and "Figure4c.dat" contain data that were presented in Figure 4a, Figure4b, and Figure4c of the manuscript. The first columns contain the x-axis values, the second columns the intensities, and the third column the errorbars.

The files "Figure3_N.dat" present the data in Figure 3 c. Here, N labels the (K,L)-coordinates. These are orivuded in "Figure3_KL.dat", where for a number N the N-th row presents the K and L values in the first and second column, respectively.

The files "Fig2a.dat" and "Fig2b.dat" contain the datapoints presented in Figure 2a and Figure 2b, where the first column corresponds to the x-axis coordinate and the second column to the recorded intensity.
DOI: 10.5281/zenodo.13948135
title: Free Energy-based Refinement of DNA Force Field via Modification of Multiple Non-bonding Energy Terms

description: Relevant files of the benchmark DNA simulations.

*.xtc --> truncated OPESE trajectory file.

*.tar --> compressed initial structures.

*.mdp --> GROMACS molecular dynamics parameter file.

*.dat --> PLUMED input file for OPESE simulation.
DOI: 10.5281/zenodo.13948136
title: Free Energy-based Refinement of DNA Force Field via Modification of Multiple Non-bonding Energy Terms

description: Relevant files of the benchmark DNA simulations.

*.xtc --> truncated OPESE trajectory file.

*.tar --> compressed initial structures.

*.mdp --> GROMACS molecular dynamics parameter file.

*.dat --> PLUMED input file for OPESE simulation.
DOI: 10.15468/dl.7h38an
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pristimantis yantzaza Valencia, Dueñas, Székely, Batallas-R. & Pulluquitín, 2017"
 ]
}

 The dataset includes 71 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020969-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13942904
title: Dummy TOPMed Imputed Dataset

description: This dataset comprises of bgzipped VCF files representative of output from the TOPMed imputation server (TOPMed-r3 imputation panel) October 2024. Each VCF contains 10,000 dummy individuals and "imputed" variants related to autosomal site lists found in the r3 panel. The data in the INFO field for each variant does not represent genotypes provided. All variants have MAF=0.5 with genotypes distributed under HWE. To assist in optimizing compression ratio, the first 2,500 individuals are homozygous for the reference allele, the next 5,000 are heterozygous, and the following 2,500 individuals are homozygous for the ALT allele.
DOI: 10.5281/zenodo.13942905
title: Dummy TOPMed Imputed Dataset

description: This dataset comprises of bgzipped VCF files representative of output from the TOPMed imputation server (TOPMed-r3 imputation panel) October 2024. Each VCF contains 10,000 dummy individuals and "imputed" variants related to autosomal site lists found in the r3 panel. The data in the INFO field for each variant does not represent genotypes provided. All variants have MAF=0.5 with genotypes distributed under HWE. To assist in optimizing compression ratio, the first 2,500 individuals are homozygous for the reference allele, the next 5,000 are heterozygous, and the following 2,500 individuals are homozygous for the ALT allele.
DOI: 10.5517/ccdc.csd.cc2j0ngp
title: CCDC 2324332: Experimental Crystal Structure Determination

description: Related Article: Iuliana Besleaga, Anastasia A. Fesenko, Anup Paul, Biljana Šljukić, Peter Rapta, Armando J. L. Pombeiro, Anatoly D. Shutalev, Vladimir B. Arion|2024|Dalton Trans.|53|15826|doi:10.1039/D4DT02182G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j0nhq
title: CCDC 2324333: Experimental Crystal Structure Determination

description: Related Article: Iuliana Besleaga, Anastasia A. Fesenko, Anup Paul, Biljana Šljukić, Peter Rapta, Armando J. L. Pombeiro, Anatoly D. Shutalev, Vladimir B. Arion|2024|Dalton Trans.|53|15826|doi:10.1039/D4DT02182G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.