cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.fn7n3r
title: Occurrence Download

description: A dataset containing 4438 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GbifRegion is Latin America and the Caribbean",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mikania micrantha Kunth"
 ]
}

 The dataset includes 4438 records from 252 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079435-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34847/nkl.5b2bn2wl
title: CSV_Levroux_GRAF.csv
DOI: 10.15468/dl.guyra8
title: Occurrence Download

description: A dataset containing 280 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ailuropoda melanoleuca (David, 1869)"
 ]
}

 The dataset includes 280 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079436-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.txt87t
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capsella bursa-pastoris (L.) Medik.",
 "Country is Kyrgyzstan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 21 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079439-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12325695
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.3tvv4a
title: Occurrence Download

description: A dataset containing 242 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capsella bursa-pastoris (L.) Medik.",
 "Country is Chile",
 "HasCoordinate is true"
 ]
}

 The dataset includes 242 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079438-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27111631
title: supplementary_data_1.zip

description: Three-dimensional structures of the depolymerases proteins missed by Pires \textit{et al.} but detected by our method DepoScope, in the PDB format
DOI: 10.6084/m9.figshare.27111631.v1
title: supplementary_data_1.zip

description: Three-dimensional structures of the depolymerases proteins missed by Pires \textit{et al.} but detected by our method DepoScope, in the PDB format
DOI: 10.6084/m9.figshare.29434529
title: Data supporting: Combined heat and drought affect the abundance, composition, and diversity of subalpine surface-active soil arthropod communities

description: This dataset supports a field study of the effects of soil heating and drought manipulations <i>in situ</i> on the soil arthropod community during the growing season in subalpine grassy herbfields in NSW, Australia.<b>Abstract</b>Alpine and subalpine ecosystems are predicted to have increased temperature and altered seasonal rainfall and snow cover duration as climate change progresses, potentially changing the communities of these ecosystems. Soil arthropods facilitate key environmental processes that determine ecosystem function and stability; however, little is known about how warming and drought conditions impact soil arthropod communities in the field. This study aimed to assess the effects of soil warming and drought conditions on the abundance and diversity of soil arthropod communities. Climate-controlled shelters manipulated soil temperature and incoming precipitation in a factorial experiment (FutureClim) in a subalpine grassy herbfield in Australia. Surface-active arthropods were sampled from climate-controlled shelters using pitfall traps in January, March, and April 2023, and were identified to order. Abundance, diversity, and community composition changed significantly across the sampling period. Diversity was lowest in all warming and drought treatments in April relative to control, while community composition was significantly driven by temperature and moisture but also was highly variable across the site. The effects of warming and drought on abundance differed substantially between arthropod taxa, with opposing effects on mesofauna and macrofauna. Two Collembola orders, which comprised a large proportion of the arthropod community, were more abundant in heated shelters during the cooler months. In contrast, Hymenoptera (mostly driven by the dominant alpine ant <i>Iridomyrmex alpinus</i>), Hemiptera, and Diptera were more abundant in drought and heat-drought conditions, but larvae were scarce in droughted treatments. Collectively, this study suggests that abundance, composition, and possibly diversity of surface-active mesofauna and macrofauna will likely change in future. Focus on phenological shifts of communities over both short and long timescales, coupled with vegetation and soil changes, is needed to better understand potential ecological changes associated with soil warming and drying.
DOI: 10.6084/m9.figshare.29434529.v1
title: Data supporting: Combined heat and drought affect the abundance, composition, and diversity of subalpine surface-active soil arthropod communities

description: This dataset supports a field study of the effects of soil heating and drought manipulations <i>in situ</i> on the soil arthropod community during the growing season in subalpine grassy herbfields in NSW, Australia.<b>Abstract</b>Alpine and subalpine ecosystems are predicted to have increased temperature and altered seasonal rainfall and snow cover duration as climate change progresses, potentially changing the communities of these ecosystems. Soil arthropods facilitate key environmental processes that determine ecosystem function and stability; however, little is known about how warming and drought conditions impact soil arthropod communities in the field. This study aimed to assess the effects of soil warming and drought conditions on the abundance and diversity of soil arthropod communities. Climate-controlled shelters manipulated soil temperature and incoming precipitation in a factorial experiment (FutureClim) in a subalpine grassy herbfield in Australia. Surface-active arthropods were sampled from climate-controlled shelters using pitfall traps in January, March, and April 2023, and were identified to order. Abundance, diversity, and community composition changed significantly across the sampling period. Diversity was lowest in all warming and drought treatments in April relative to control, while community composition was significantly driven by temperature and moisture but also was highly variable across the site. The effects of warming and drought on abundance differed substantially between arthropod taxa, with opposing effects on mesofauna and macrofauna. Two Collembola orders, which comprised a large proportion of the arthropod community, were more abundant in heated shelters during the cooler months. In contrast, Hymenoptera (mostly driven by the dominant alpine ant <i>Iridomyrmex alpinus</i>), Hemiptera, and Diptera were more abundant in drought and heat-drought conditions, but larvae were scarce in droughted treatments. Collectively, this study suggests that abundance, composition, and possibly diversity of surface-active mesofauna and macrofauna will likely change in future. Focus on phenological shifts of communities over both short and long timescales, coupled with vegetation and soil changes, is needed to better understand potential ecological changes associated with soil warming and drying.
DOI: 10.15468/dl.wfsv8z
title: Occurrence Download

description: A dataset containing 1694 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cocos nucifera L.",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1694 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079441-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.upj3kt
title: Occurrence Download

description: A dataset containing 3131 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capsella bursa-pastoris (L.) Medik.",
 "Country is Ukraine",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3131 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079442-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27111625
title: supplementary_data_2.docx

description: Amino acid sequences of detected depolymerase proteins. All of them carry a polysaccharides-degrading domain
DOI: 10.6084/m9.figshare.27111625.v1
title: supplementary_data_2.docx

description: Amino acid sequences of detected depolymerase proteins. All of them carry a polysaccharides-degrading domain
DOI: 10.15468/dl.xcu3py
title: Occurrence Download

description: A dataset containing 20026 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capsella bursa-pastoris (L.) Medik.",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 20026 records from 200 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079446-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.atp7nc
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capsella bursa-pastoris (L.) Medik.",
 "Country is Uzbekistan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 87 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079447-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8sjmng
title: Occurrence Download

description: A dataset containing 250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Opuntia stricta (Haw.) Haw.",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 250 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079448-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15770576
title: scPDA: denoising protein expression in droplet-based single-cell data

description: This folder contains the scPDA package and all the code needed to reproduce the results and figures in the scPDA manuscript.

Folder Explanation:



data: Four datasets (in .rds format) used in the Results section of the manuscript.

code: Scripts that apply various protein‐count denoising methods (GMM, DSB, scAR, DecontPro, scPDA) to each dataset. Results are saved under the “results” folder.

results: Denoised count outputs for each dataset and each method.

fig_reprod: Scripts to regenerate figures in the manuscript and supplementary materials.

scPDA: The development version of the scPDA Python package (installable via “pip install -e scPDA”)
DOI: 10.5281/zenodo.15770577
title: scPDA: denoising protein expression in droplet-based single-cell data

description: This folder contains the scPDA package and all the code needed to reproduce the results and figures in the scPDA manuscript.

Folder Explanation:



data: Four datasets (in .rds format) used in the Results section of the manuscript.

code: Scripts that apply various protein‐count denoising methods (GMM, DSB, scAR, DecontPro, scPDA) to each dataset. Results are saved under the “results” folder.

results: Denoised count outputs for each dataset and each method.

fig_reprod: Scripts to regenerate figures in the manuscript and supplementary materials.

scPDA: The development version of the scPDA Python package (installable via “pip install -e scPDA”)
DOI: 10.15468/dl.v46jxg
title: Occurrence Download

description: A dataset containing 280 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ailuropoda melanoleuca (David, 1869)"
 ]
}

 The dataset includes 280 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079451-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27111628
title: supplementary_data_3.zip

description: DataFrame containing the information of the prophages, the encoded depolymerase protein, their domain sequences, the target KL type and complementary data
DOI: 10.6084/m9.figshare.27111628.v1
title: supplementary_data_3.zip

description: DataFrame containing the information of the prophages, the encoded depolymerase protein, their domain sequences, the target KL type and complementary data
DOI: 10.15468/dl.wx2pku
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Raoiella indica Hirst, 1924",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079452-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ykfc8q
title: Occurrence Download

description: A dataset containing 434 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Diplotaxis tenuifolia (L.) DC.",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 434 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079455-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.63f5v9
title: Occurrence Download

description: A dataset containing 1156 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Diplotaxis tenuifolia (L.) DC.",
 "Country is Ukraine",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1156 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079456-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27111637.v1
title: supplementary_data_5.zip

description: DataFrame containing the information of the depolymerase protein sequences, their target KL types and their corresponding attention weights, as well as complementary data
DOI: 10.6084/m9.figshare.27111637
title: supplementary_data_5.zip

description: DataFrame containing the information of the depolymerase protein sequences, their target KL types and their corresponding attention weights, as well as complementary data
DOI: 10.15468/dl.hmsape
title: Occurrence Download

description: A dataset containing 133792 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pinus L., Eucalyptus L'Hér., Hakea Schrad.)",
 "Year is one of (2023)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 133792 records from 270 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079437-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-182650
title: Tserkvi i relihiy̆ni orhanizatsiï Ukraïny v 2001 rotsi: dovidnyk = [Church and religious organizations in Ukraine in 2001: directory], 2002

description: [description english/roman)] State Committee of Ukraine on Religious Matters [Derzhavniy Komitet Ukraini u Spravakh religiy]. Church and religious organizations in Ukraine in 2001: directory [Tserkvi i relihiy̆ni orhanizatsiï Ukraïny v 2001 rotsi: dovidnyk]. Kiev, Ukraine: VIP, 2002.
DOI: 10.25549/pcra-c14-193796
title: Khristiaskiy vestnik = [Christian herald], vol. 22 [sic, i.e. 23], whole no. 256-258 (1959 January-March)

description: [description english/roman)] The Christian Herald was an informational organ of the Union of Pentecostal churches of "Assemblies of God" in South America. The journal was founded in August 1937 at the founding meeting of the Slavic Pentecostal churches of South America. Believers from Argentina, Paraguay, Uruguay and Brazil were present at the meeting. The purpose of the journal was to "carry unity and communication of the Spirit to the midst of believers in full Gospel". The journal united Pentecostal churches and became a link which connected believers scattered all over the world. Thus, letters of Christians of Evangelical faith from Germany, Belgium, France, the Netherlands, Canada, the United States, Uruguay, Paraguay, the Philippines, China, Australia and other countries were published in the journal journal. The first issue was published in Russia in October 1937. Subsequently, the journal spread to 40 countries where the Slavic diaspora lived. The headquarters of the journal was located in Buenos Aires. Juan Zub-Zolotarow was responsible for the journal. He was a permanent editor for 42 years. The journal was published for offerings of believers. Spiritually-edifying and theological articles of Donald Gee, Alfred Goets, R. Bratslavsky, N. Vodnevsky, D. Bespalov were published in the journal. On the last pages, as a rule, information from local churches and the mission and evangelical fields of North and South America, Canada, Africa, Australia, India, Europe and China was published. Thus the activity of such evangelists as Oral Roberts, Billy Graham, T. Giks, and William Brankham was reported in detail.
DOI: 10.15468/dl.26q9ez
title: Occurrence Download

description: A dataset containing 157 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rubus distractiformis A.Newton"
 ]
}

 The dataset includes 157 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105883-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mqfnmt
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is India",
 "OccurrenceStatus is Present",
 "TaxonKey is Spilornis klossi Richmond, 1902"
 ]
}

 The dataset includes 73 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111233-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tjdr78
title: Occurrence Download

description: A dataset containing 19195 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sebastes caurinus Richardson, 1844"
 ]
}

 The dataset includes 19195 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0109634-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.atgqzd
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vernonia parapetersii C.Jeffrey"
 ]
}

 The dataset includes 55 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029262-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.htkyav
title: Occurrence Download

description: A dataset containing 120 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sarcohyla cyclada (Campbell & Duellman, 2000))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 120 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057331-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-183756
title: Proydennyy put' = [Distance travelled], 2005

description: [description english/roman)] Nikolai Egorov. Proydennyy put' = [Distance travelled]. Maloyaroslavets, Russia: Evangelist Publishing, 2005.
DOI: 10.15468/dl.5gnvw6
title: Occurrence Download

description: A dataset containing 1633 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dalbergia melanoxylon Guill. & Perr."
 ]
}

 The dataset includes 1633 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0343840-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yshrpb
title: Occurrence Download

description: A dataset containing 163 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ipomoea fistulosa Mart. ex Choisy",
 "HasCoordinate is true"
 ]
}

 The dataset includes 163 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015707-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a7nvh8
title: Occurrence Download

description: A dataset containing 146 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Altolamprologus calvus (Poll, 1978)"
 ]
}

 The dataset includes 146 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0339544-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t6pu54
title: Occurrence Download

description: A dataset containing 498 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Bromeliohyla dendroscarta (Taylor, 1940))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 498 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057344-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25728399
title: Plasma untargeted metabolomics data of male and female rats under 8:2 FTOH exposure

description: We previously found that 8:2 FTOH overactivates AHR and results in abnormal mitochondrial metabolism. To study the role of AHR overactivation <i>in vivo</i>, male and female Wistar rats were administered different concentrations of 8:2 FTOH by gavage for 28 days. At the end of the treatment, plasma was collected for broadly targeted metabolomics and lipid metabolomics analysis.