cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21227/x4d9-yg08
title: CHARACTERIZATION AND QUANTIFICATION OF TELEVISION WHITE SPACE DATASET

description: A practical alternative to the solution of the spectrum scarcity problem in wireless communication is the use of Cognitive Radio. The Primary users of which can be protected from secondary user interference by accurate prediction of TV White Spaces (TVWS) by using appropriate propagation modelling. In implementing any mobile communication system, the essential chore is to envisage the coverage of the projected system in a wide range. Also, the accurate determination of the propagation path loss leads to the development of efficient design and operation of quality networks. Many such dissimilar approaches have been developed, over time, to predict network coverage using what we know as propagation models. This data article presents a measurement-based path loss model, from experimental data collected in Calabar urban, South-South Nigeria. Received Signal Strength (RSS) measurements were gotten in Calabar from Cross River Broadcasting Corporation (CRBC) operating at 519.25MHz (Nigeria). Variations in path loss between the measured and the predicted values from theOkumura-Hata model were calculated by finding the mean square errors (MSE). A comprehensive quantitative estimation of TVWS is done. The data is analysed and presented in tables, graphs, and figures
DOI: 10.6084/m9.figshare.6839810
title: Supplementary Material for: Comparative Cytogenetics of Omophoita abbreviata and O. aequinoctialis (Coleoptera, Chrysomelidae, Alticini) from the Adolpho Ducke Forest Reserve in Brazilian Amazonia: Intrapopulation Variation in Karyotypes

description: The chromosomes of 2 flea beetle species from central Amazonia, <i>Omophoita abbreviata</i> and <i>O. aequinoctialis</i> (Alticini), were investigated through analysis of meiotic and mitotic cells. These species belong to the subtribe Oedionychina, a taxon that has unique cytogenetic features, such as giant sex chromosomes which are aligned at a distance during meiosis I (asynaptic). <i>O. abbreviata</i> and <i>O. aequinoctialis </i>have a meiotic formula of 10II + X + y, which is predominant in this subtribe. While the species of the genus <i>Omophoita</i> possess a relatively stable karyotype, a typical feature for Oedionychina, the present study identified inter- and intrapopulational variation in chromosome morphology, constitutive heterochromatin, and the presence and number of B chromosomes in<i> O. aequinoctialis</i>. In addition, FISH mapping of telomeric sequences revealed signals in the collochores, raising several questions on the chromosomal evolution in this group.
DOI: 10.6084/m9.figshare.6839810.v1
title: Supplementary Material for: Comparative Cytogenetics of Omophoita abbreviata and O. aequinoctialis (Coleoptera, Chrysomelidae, Alticini) from the Adolpho Ducke Forest Reserve in Brazilian Amazonia: Intrapopulation Variation in Karyotypes

description: The chromosomes of 2 flea beetle species from central Amazonia, <i>Omophoita abbreviata</i> and <i>O. aequinoctialis</i> (Alticini), were investigated through analysis of meiotic and mitotic cells. These species belong to the subtribe Oedionychina, a taxon that has unique cytogenetic features, such as giant sex chromosomes which are aligned at a distance during meiosis I (asynaptic). <i>O. abbreviata</i> and <i>O. aequinoctialis </i>have a meiotic formula of 10II + X + y, which is predominant in this subtribe. While the species of the genus <i>Omophoita</i> possess a relatively stable karyotype, a typical feature for Oedionychina, the present study identified inter- and intrapopulational variation in chromosome morphology, constitutive heterochromatin, and the presence and number of B chromosomes in<i> O. aequinoctialis</i>. In addition, FISH mapping of telomeric sequences revealed signals in the collochores, raising several questions on the chromosomal evolution in this group.
DOI: 10.21227/cmqx-yn07
title: CHARACTERIZATION AND QUANTIFICATION OF TELEVISION WHITE SPACE DATASET

description: A practical alternative to the solution of the spectrum scarcity problem in wireless communication is the use of Cognitive Radio. The Primary users of which can be protected from secondary user interference by accurate prediction of TV White Spaces (TVWS) by using appropriate propagation modelling. In implementing any mobile communication system, the essential chore is to envisage the coverage of the projected system in a wide range. Also, the accurate determination of the propagation path loss leads to the development of efficient design and operation of quality networks. Many such dissimilar approaches have been developed, over time, to predict network coverage using what we know as propagation models. This data article presents a measurement-based path loss model, from experimental data collected in Calabar urban, South-South Nigeria. Received Signal Strength (RSS) measurements were gotten in Calabar from Cross River Broadcasting Corporation (CRBC) operating at 519.25MHz (Nigeria). Variations in path loss between the measured and the predicted values from theOkumura-Hata model were calculated by finding the mean square errors (MSE). A comprehensive quantitative estimation of TVWS is done. The data is analysed and presented in tables, graphs, and figures
DOI: 10.6084/m9.figshare.6839666
title: Mobile Broadband Traceroute Observations Tamil Nadu India

description: This dataset represents the collection of 731'200 traceroute hop observations collected during a field-work in India using 3 Android OS smartphones connected to Vodafone, Bharti Airtel and Aircel, running the Portolan Network Sensing Architecture application.<br>
DOI: 10.6084/m9.figshare.6839666.v1
title: india_traceroute_2015_03.txt

description: This dataset represents the collection of 731'200 traceroute hop observations collected during a field-work in India using 3 smartphones connected to Vodafone, Bharti Airtel and Aircel.<br>
DOI: 10.6084/m9.figshare.6839666.v2
title: Mobile Broadband Traceroute Observations Tamil Nadu India

description: This dataset represents the collection of 731'200 traceroute hop observations collected during a field-work in India using 3 smartphones connected to Vodafone, Bharti Airtel and Aircel.<br>
DOI: 10.6084/m9.figshare.6839666.v4
title: Mobile Broadband Traceroute Observations Tamil Nadu India

description: This dataset represents the collection of 731'200 traceroute hop observations collected during a field-work in India using 3 Android OS smartphones connected to Vodafone, Bharti Airtel and Aircel, running the Portolan Network Sensing Architecture application.<br>
DOI: 10.6084/m9.figshare.6839591
title: Muscle nonshivering thermogenesis in a feral mammal

description: data basis used for statistical analyses<br>
DOI: 10.6084/m9.figshare.6839591.v1
title: Muscle nonshivering thermogenesis in a feral mammal

description: data basis used for statistical analyses<br>
DOI: 10.6084/m9.figshare.6839534
title: Koorneef et al Supplementary Materials.pdf

description: In this study we investigated a selective glucocorticoid receptor modulator for its utility to combat liver steatosis in mice.
DOI: 10.6084/m9.figshare.6839534.v1
title: Koorneef et al Supplementary Materials.pdf

description: In this study we investigated a selective glucocorticoid receptor modulator for its utility to combat liver steatosis in mice.
DOI: 10.6084/m9.figshare.6839324
title: Supplementary Material for: Stereotactic Body Radiation Therapy as an Alternative Treatment for Patients with Hepatocellular Carcinoma Compared to Sorafenib: A Propensity Score Analysis

description: <b><i>Background and Aims:</i></b> Stereotactic body radiation therapy (SBRT) has emerged as a safe and effective treatment for patients with hepatocellular carcinoma (HCC), but its role in patients with advanced HCC is not yet defined. In this study, we aim to assess the efficacy and safety of SBRT in comparison to sorafenib treatment in patients with advanced HCC. <b><i>Methods:</i></b> We included 901 patients treated with sorafenib at six tertiary centers in Europe and Asia and 122 patients treated with SBRT from 13 centers in Germany and Switzerland. Medical records were reviewed including laboratory parameters, treatment characteristics and development of adverse events. Propensity score matching was performed to adjust for differences in baseline characteristics. The primary endpoint was overall survival (OS) and progression-free survival. <b><i>Results:</i></b> Median OS of SBRT patients was 18.1 (10.3–25.9) months compared to 8.8 (8.2–9.5) in sorafenib patients. After adjusting for different baseline characteristics, the survival benefit for patients treated with SBRT was still preserved with a median OS of 17.0 (10.8–23.2) months compared to 9.6 (8.6–10.7) months in sorafenib patients. SBRT treatment of intrahepatic lesions in patients with extrahepatic metastases was also associated with improved OS compared to patients treated with sorafenib in the same setting (17.0 vs. 10.0 months, <i>p</i> = 0.012), whereas in patients with portal vein thrombosis there was no survival benefit in patients with SBRT. <b><i>Conclusions:</i></b> In this retrospective comparative study, SBRT showed superior efficacy in HCC patients compared to patients treated with sorafenib.
DOI: 10.6084/m9.figshare.6839324.v1
title: Supplementary Material for: Stereotactic Body Radiation Therapy as an Alternative Treatment for Patients with Hepatocellular Carcinoma Compared to Sorafenib: A Propensity Score Analysis

description: <b><i>Background and Aims:</i></b> Stereotactic body radiation therapy (SBRT) has emerged as a safe and effective treatment for patients with hepatocellular carcinoma (HCC), but its role in patients with advanced HCC is not yet defined. In this study, we aim to assess the efficacy and safety of SBRT in comparison to sorafenib treatment in patients with advanced HCC. <b><i>Methods:</i></b> We included 901 patients treated with sorafenib at six tertiary centers in Europe and Asia and 122 patients treated with SBRT from 13 centers in Germany and Switzerland. Medical records were reviewed including laboratory parameters, treatment characteristics and development of adverse events. Propensity score matching was performed to adjust for differences in baseline characteristics. The primary endpoint was overall survival (OS) and progression-free survival. <b><i>Results:</i></b> Median OS of SBRT patients was 18.1 (10.3–25.9) months compared to 8.8 (8.2–9.5) in sorafenib patients. After adjusting for different baseline characteristics, the survival benefit for patients treated with SBRT was still preserved with a median OS of 17.0 (10.8–23.2) months compared to 9.6 (8.6–10.7) months in sorafenib patients. SBRT treatment of intrahepatic lesions in patients with extrahepatic metastases was also associated with improved OS compared to patients treated with sorafenib in the same setting (17.0 vs. 10.0 months, <i>p</i> = 0.012), whereas in patients with portal vein thrombosis there was no survival benefit in patients with SBRT. <b><i>Conclusions:</i></b> In this retrospective comparative study, SBRT showed superior efficacy in HCC patients compared to patients treated with sorafenib.
DOI: 10.15131/shef.data.6839315
title: Phenotypic variation in Heliconius erato crosses shows iridescent structural colour is sex-linked and controlled by multiple genes - 1D SAXS Data

description: 1D reduced SAXS data used to measure scale features in Heliconius erato individuals. The tarball contains two folders, one for raw and one for formatted data. It also contains an accompanying file used to specify individual file locations to the software used in their analysis as well as a file with the results of running the software. All files have tab separated text format.<br>
DOI: 10.15131/shef.data.6839315.v1
title: Phenotypic variation in Heliconius erato crosses shows iridescent structural colour is sex-linked and controlled by multiple genes - 1D SAXS Data

description: 1D reduced SAXS data used to measure scale features in Heliconius erato individuals. The tarball contains two folders, one for raw and one for formatted data. It also contains an accompanying file used to specify individual file locations to the software used in their analysis as well as a file with the results of running the software. All files have tab separated text format.<br>
DOI: 10.6084/m9.figshare.6839066
title: MOESM5 of Expression of NK cluster genes in the onychophoran Euperipatoides rowelli: implications for the evolution of NK family genes in nephrozoans

description: Additional file 5. Alignment of the 382 NK homeodomains of various metazoan taxa that was used for the maximum-likelihood analysis.
DOI: 10.6084/m9.figshare.6839066.v1
title: MOESM5 of Expression of NK cluster genes in the onychophoran Euperipatoides rowelli: implications for the evolution of NK family genes in nephrozoans

description: Additional file 5. Alignment of the 382 NK homeodomains of various metazoan taxa that was used for the maximum-likelihood analysis.
DOI: 10.6084/m9.figshare.6839036
title: Additional file 1: of Activity and movement of free-living box turtles are largely independent of ambient and thermal conditions

description: R Script for binary classification of ODBA values from accelerometer data. (R 6Â kb)
DOI: 10.6084/m9.figshare.6839036.v1
title: Additional file 1: of Activity and movement of free-living box turtles are largely independent of ambient and thermal conditions

description: R Script for binary classification of ODBA values from accelerometer data. (R 6Â kb)
DOI: 10.6084/m9.figshare.6839021
title: MOESM2 of Expression of NK cluster genes in the onychophoran Euperipatoides rowelli: implications for the evolution of NK family genes in nephrozoans

description: Additional file 2. Comparative transcriptomic analysis of NK genes in the onychophoran E. rowelli showing the average number of matched nucleotides per position and GB (upper table) of all studied NK genes from different transcriptome libraries of partially pooled embryonic stages, and the relative expression level in comparison to the abundance of ribosomal protein RPL31 transcripts (lower table) obtained from the short read mapping analysis.
DOI: 10.6084/m9.figshare.6839021.v1
title: MOESM2 of Expression of NK cluster genes in the onychophoran Euperipatoides rowelli: implications for the evolution of NK family genes in nephrozoans

description: Additional file 2. Comparative transcriptomic analysis of NK genes in the onychophoran E. rowelli showing the average number of matched nucleotides per position and GB (upper table) of all studied NK genes from different transcriptome libraries of partially pooled embryonic stages, and the relative expression level in comparison to the abundance of ribosomal protein RPL31 transcripts (lower table) obtained from the short read mapping analysis.
DOI: 10.6084/m9.figshare.6838976
title: Additional file 6: of Divergence times in demosponges (Porifera): first insights from new mitogenomes and the inclusion of fossils in a birth-death clock model

description: BEAST analysis 2 output log file. (LOG 106 kb)
DOI: 10.6084/m9.figshare.6838976.v1
title: Additional file 6: of Divergence times in demosponges (Porifera): first insights from new mitogenomes and the inclusion of fossils in a birth-death clock model

description: BEAST analysis 2 output log file. (LOG 106 kb)
DOI: 10.34740/kaggle/dsv/1448056
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.6084/m9.figshare.6838937
title: Additional file 3: of Divergence times in demosponges (Porifera): first insights from new mitogenomes and the inclusion of fossils in a birth-death clock model

description: XML BEAST file including data matrix and parameter setup as described in Materials and Methods. (XML 291 kb)
DOI: 10.6084/m9.figshare.6838937.v1
title: Additional file 3: of Divergence times in demosponges (Porifera): first insights from new mitogenomes and the inclusion of fossils in a birth-death clock model

description: XML BEAST file including data matrix and parameter setup as described in Materials and Methods. (XML 291 kb)
DOI: 10.6084/m9.figshare.6838922
title: Additional file 1: of Divergence times in demosponges (Porifera): first insights from new mitogenomes and the inclusion of fossils in a birth-death clock model

description: Species list and ezRAD library information. (XLSX 52 kb)
DOI: 10.6084/m9.figshare.6838922.v1
title: Additional file 1: of Divergence times in demosponges (Porifera): first insights from new mitogenomes and the inclusion of fossils in a birth-death clock model

description: Species list and ezRAD library information. (XLSX 52 kb)
DOI: 10.6084/m9.figshare.6838904
title: Additional file 1: of Disentangling the drivers of diversification in an imperiled group of freshwater fishes (Cyprinodontiformes: Goodeidae)

description: Table S1. Genbank accession numbers and locality information used to generated the time calibrated phylogeny. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.6838904.v1
title: Additional file 1: of Disentangling the drivers of diversification in an imperiled group of freshwater fishes (Cyprinodontiformes: Goodeidae)

description: Table S1. Genbank accession numbers and locality information used to generated the time calibrated phylogeny. (XLSX 13Â kb)
DOI: 10.6084/m9.figshare.6838859
title: Additional file 3: of The dynamic changes in the number of uterine natural killer cells are specific to the eutopic but not to the ectopic endometrium in women and in a baboon model of endometriosis

description: Table S2. The differentially expressed genes in post ovulatory eutopic endometrium of baboons 6 months after induction of endometriosis (n = 4) compared with the same of control animals (n = 4) published in Additional file 3: Table S2, in Afshar et al. [29] (bioset 2) was interrogated to identify 40 out of 92 genes encoding for uNK cell receptor/ligand described in 2nd tab of the Additional file 2: Table S1 (bioset 1) amongst these altered genes. NCR3, CADM1 and HCST genes which were amongst the top 10 up-regulated genes in the human eutopic endometriosis (in Table 1) were amongst these, suggesting a close homology of the baboon model with the human disease (XLSX 12 kb)
DOI: 10.6084/m9.figshare.6838859.v1
title: Additional file 3: of The dynamic changes in the number of uterine natural killer cells are specific to the eutopic but not to the ectopic endometrium in women and in a baboon model of endometriosis

description: Table S2. The differentially expressed genes in post ovulatory eutopic endometrium of baboons 6 months after induction of endometriosis (n = 4) compared with the same of control animals (n = 4) published in Additional file 3: Table S2, in Afshar et al. [29] (bioset 2) was interrogated to identify 40 out of 92 genes encoding for uNK cell receptor/ligand described in 2nd tab of the Additional file 2: Table S1 (bioset 1) amongst these altered genes. NCR3, CADM1 and HCST genes which were amongst the top 10 up-regulated genes in the human eutopic endometriosis (in Table 1) were amongst these, suggesting a close homology of the baboon model with the human disease (XLSX 12 kb)
DOI: 10.6084/m9.figshare.6838838
title: Additional file 2: of The dynamic changes in the number of uterine natural killer cells are specific to the eutopic but not to the ectopic endometrium in women and in a baboon model of endometriosis

description: Table S1. Output from bioinformatics analysis showing differential expression of genes encoding NK cell receptors and ligands in secretory phase endometrium from endometriosis patients when compared with the endometrium of control women without endometriosis ordered by specificity and overall gene score. Full gene list examined is shown in the second tab. (XLSX 26Â kb)
DOI: 10.6084/m9.figshare.6838838.v1
title: Additional file 2: of The dynamic changes in the number of uterine natural killer cells are specific to the eutopic but not to the ectopic endometrium in women and in a baboon model of endometriosis

description: Table S1. Output from bioinformatics analysis showing differential expression of genes encoding NK cell receptors and ligands in secretory phase endometrium from endometriosis patients when compared with the endometrium of control women without endometriosis ordered by specificity and overall gene score. Full gene list examined is shown in the second tab. (XLSX 26Â kb)
DOI: 10.6084/m9.figshare.6838802
title: Additional file 7 of Benchmarking differential expression analysis tools for RNA-Seq: normalization-based vs. log-ratio transformation-based methods

description: Benchmark performance for Williams et al. data. This table contains the precision and recall estimates for several methods as applied to the Williams et al. data. This table is used to make figures. (CSV 6 kb)
DOI: 10.6084/m9.figshare.6838784
title: Additional file 6 of Benchmarking differential expression analysis tools for RNA-Seq: normalization-based vs. log-ratio transformation-based methods

description: Simulated data benchmark performance. This table contains the precision and recall estimates for several methods as applied to the low and high variance simulated data. This table is used to make figures. (CSV 2945 kb)
DOI: 10.6084/m9.figshare.6838784.v1
title: Additional file 6 of Benchmarking differential expression analysis tools for RNA-Seq: normalization-based vs. log-ratio transformation-based methods

description: Simulated data benchmark performance. This table contains the precision and recall estimates for several methods as applied to the low and high variance simulated data. This table is used to make figures. (CSV 2945 kb)
DOI: 10.6084/m9.figshare.6838757
title: Additional file 4 of Benchmarking differential expression analysis tools for RNA-Seq: normalization-based vs. log-ratio transformation-based methods

description: Group labels for Rollins et al. data. This table contains the group labels for all samples from the Rollins et al. cane toad data set. (CSV 1 kb)
DOI: 10.6084/m9.figshare.6838757.v1
title: Additional file 4 of Benchmarking differential expression analysis tools for RNA-Seq: normalization-based vs. log-ratio transformation-based methods

description: Group labels for Rollins et al. data. This table contains the group labels for all samples from the Rollins et al. cane toad data set. (CSV 1 kb)
DOI: 10.6084/m9.figshare.6838751
title: Additional file 3 of Benchmarking differential expression analysis tools for RNA-Seq: normalization-based vs. log-ratio transformation-based methods

description: Estimated relative abundance for Rollins et al. data (by stsl method). This table contains the relative transcript abundances as estimated using the stsl procedure. (CSV 4579 kb)
DOI: 10.6084/m9.figshare.6838727
title: Additional file 2 of Benchmarking differential expression analysis tools for RNA-Seq: normalization-based vs. log-ratio transformation-based methods

description: Estimated relative abundance for Rollins et al. data (by slQUASI method). This table contains the relative transcript abundances as estimated using the slQUASI procedure. (CSV 4758 kb)
DOI: 10.6084/m9.figshare.6838730
title: Additional file 4: of Genome-wide methylomic analysis in individuals with HNF1B intragenic mutation and 17q12 microdeletion

description: Table S3. Probes that are significantly differentaly methylated in both of the separate group analyses (note that all probes are in the same direction in both analyses). (XLSX 19 kb)
DOI: 10.6084/m9.figshare.6838727.v1
title: Additional file 2 of Benchmarking differential expression analysis tools for RNA-Seq: normalization-based vs. log-ratio transformation-based methods

description: Estimated relative abundance for Rollins et al. data (by slQUASI method). This table contains the relative transcript abundances as estimated using the slQUASI procedure. (CSV 4758 kb)
DOI: 10.6084/m9.figshare.6838730.v1
title: Additional file 4: of Genome-wide methylomic analysis in individuals with HNF1B intragenic mutation and 17q12 microdeletion

description: Table S3. Probes that are significantly differentaly methylated in both of the separate group analyses (note that all probes are in the same direction in both analyses). (XLSX 19 kb)