cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7293894
title: OpenFWI tutorial data

description: OpenFWI tutorial data for https://colab.research.google.com/drive/17s5JmVs9ABl8MpmFlhWMSslj9_d5Atfx#scrollTo=am6FFr41ZAsu
DOI: 10.5281/zenodo.7293893
title: OpenFWI tutorial data

description: OpenFWI tutorial data for https://colab.research.google.com/drive/17s5JmVs9ABl8MpmFlhWMSslj9_d5Atfx#scrollTo=am6FFr41ZAsu
DOI: 10.6084/m9.figshare.21511827
title: Non-invasive elevation of circulating corticosterone increases the rejection of foreign eggs in female American robins (Turdus migratorius)

description: Datasets and R code made available for the article Non-invasive elevation of circulating corticosterone increases the rejection of foreign eggs in female American robins (Turdus migratorius) published in Hormones & Behavior.
DOI: 10.6084/m9.figshare.21511827.v1
title: Non-invasive elevation of circulating corticosterone increases the rejection of foreign eggs in female American robins (Turdus migratorius)

description: Datasets and R code made available for the article Non-invasive elevation of circulating corticosterone increases the rejection of foreign eggs in female American robins (Turdus migratorius) published in Hormones & Behavior.
DOI: 10.5281/zenodo.7299360
title: Results from the FLEX Model for the paper "Impact of variable electricity price on heat pump operated buildings"

description: The sqlite database contains the results of the Flex model for the Austrian single family house building stock ( insert GITHUB LINK). The building stock is represented by 36 different representative building archetypes (“OperationScenario_Component_Building”). Each building is simulated in twice. In the "reference" mode the energy demand is simply met and indoor comfort is kept constant. In the "optimization" mode the indoor temperature can be varied and thermal storages are charged and discharged minimizing the households energy cost based on a variable electricity price. The sqlite database “Variable_Price_Paper” contains the results for the building stock without any storage implemented. In “Variable_Price_Paper_TS” all buildings have a 750l hot water buffer storage and a 400l DHW storage implemented. The sqlite files SFH_23/25/27 contain the results for a single building where the maximum inside room temperature was changed to 23, 25 and 27 °C respectively. Following columns were used for generating the results for the Paper: In the hourly results relevant parameters used in the publication were: ID_Scenario: each building simulated under a different electricity price has a unique scenario number. “OperationScenario” gives an overview of the scenarios. Grid: describes the electricity demand from the grid by the household. In the yearly results relevant parameters used in the publication were: ID_Scenario TotalCost: represent the yearly operation cost Grid: electricity demand summed up for the whole year 5 different electricity prices are used for scenario generation. The first price is constant, “electricity_2” is the real time price from 2021 plus a hypothetical grid fee of 20cents/kWh. “electricity_3, electricity_4, electricity_5” are prices generated for 2030 for Austria with the Balmorel model. Their profiles can be found under “OperationScenario_EnergyPrice”.
DOI: 10.5281/zenodo.7299359
title: Results from the FLEX Model for the paper "Impact of variable electricity price on heat pump operated buildings"

description: The sqlite database contains the results of the Flex model for the Austrian single family house building stock ( insert GITHUB LINK). The building stock is represented by 36 different representative building archetypes (“OperationScenario_Component_Building”). Each building is simulated in twice. In the "reference" mode the energy demand is simply met and indoor comfort is kept constant. In the "optimization" mode the indoor temperature can be varied and thermal storages are charged and discharged minimizing the households energy cost based on a variable electricity price. The sqlite database “Variable_Price_Paper” contains the results for the building stock without any storage implemented. In “Variable_Price_Paper_TS” all buildings have a 750l hot water buffer storage and a 400l DHW storage implemented. The sqlite files SFH_23/25/27 contain the results for a single building where the maximum inside room temperature was changed to 23, 25 and 27 °C respectively. Following columns were used for generating the results for the Paper: In the hourly results relevant parameters used in the publication were: ID_Scenario: each building simulated under a different electricity price has a unique scenario number. “OperationScenario” gives an overview of the scenarios. Grid: describes the electricity demand from the grid by the household. In the yearly results relevant parameters used in the publication were: ID_Scenario TotalCost: represent the yearly operation cost Grid: electricity demand summed up for the whole year 5 different electricity prices are used for scenario generation. The first price is constant, “electricity_2” is the real time price from 2021 plus a hypothetical grid fee of 20cents/kWh. “electricity_3, electricity_4, electricity_5” are prices generated for 2030 for Austria with the Balmorel model. Their profiles can be found under “OperationScenario_EnergyPrice”.
DOI: 10.5281/zenodo.7299776
title: Data for "Transferring Chemical and Energetic Knowledge Between Molecular Systems With Machine Learning"

description: Data used in the paper "Transferring Chemical and Energetic Knowledge Between Molecular Systems With Machine Learning." The following is a description of each file: - ala_dipep_full.zip contains the JSON files for alanine dipeptide - ala_dipep_full.txt contains the free energy values for alanine dipeptide - trialanine.zip contains the JSON files for trialanine - trialanine.txt contains the free energy values for trialanine - decaalanine.zip contains the JSON files for decaalanine, broken into groups Each JSON file contains the following properties: - atom_types: describing the short strings used for various types of atoms via their mass and radius. - atoms: describing each individual atom, with their type via the short string in atom_types, their partial charge, and coordinates. - angles: describing the angles formed between three atoms, their atom indices, as well as their angular value. - dihedrals: describing the dihedrals formed between four atoms, their atom indices, as well as their dihedral value. - bonds: describing the existence of pairwise bonds between atoms via a binary number. - van_der_waals: describing the van der Waals forces between pairs of atoms. - coulomb: describing the Coulomb forces between pairs of atoms.
DOI: 10.5281/zenodo.7299775
title: Data for "Transferring Chemical and Energetic Knowledge Between Molecular Systems With Machine Learning"

description: Data used in the paper "Transferring Chemical and Energetic Knowledge Between Molecular Systems With Machine Learning." The following is a description of each file: - ala_dipep_full.zip contains the JSON files for alanine dipeptide - ala_dipep_full.txt contains the free energy values for alanine dipeptide - trialanine.zip contains the JSON files for trialanine - trialanine.txt contains the free energy values for trialanine - decaalanine.zip contains the JSON files for decaalanine, broken into groups Each JSON file contains the following properties: - atom_types: describing the short strings used for various types of atoms via their mass and radius. - atoms: describing each individual atom, with their type via the short string in atom_types, their partial charge, and coordinates. - angles: describing the angles formed between three atoms, their atom indices, as well as their angular value. - dihedrals: describing the dihedrals formed between four atoms, their atom indices, as well as their dihedral value. - bonds: describing the existence of pairwise bonds between atoms via a binary number. - van_der_waals: describing the van der Waals forces between pairs of atoms. - coulomb: describing the Coulomb forces between pairs of atoms.
DOI: 10.21227/sp55-pe68
title: Protein Structure and Synthetic Multi-view Clustering Datasets

description: Protein Structure and Synthetic Multi-view Clustering DatasetsMulti-View Clustering (MVC) datasets used in the following paper:Evolutionary Multi-objective Clustering Over Multiple Conflicting Data Views Mario Garza-Fabre, Julia Handl, and Adán José-García IEEE TRANSACTIONS ON EVOLUTIONARY COMPUTATION Accepted for publication in November 2022This entry contains all 420 datasets used in the paper, including:400 datasets of protein structures (Bioinformatics application). For these datasets, multiple dissimilarity matrices are provided, which can be exploited as data views during the clustering process. These matrices result from the use of distinct measures of structural similarity between the candidate structures. The process that we followed to construct these datasets is described in detail in our paper and its supplementary material.20 synthetic, two-dimensional problems. These problems present varying characteristics regarding the shape, overlap, and separability of the clusters. Multiple views are defined by the use of two different distance measures: Euclidean Distance (data view 1) and Maximum Edge Distance (data view 2).All data views (dissimilarity matrices) are provided as text files (*.txt), and additional files are included with detailed explanations regarding their organization and correct interpretation (README.txt, Problem_Information.csv, Problem_Information.xlsx).Contact: Mario Garza-Fabre (mario.garza@cinvestav.mx; garzafabre@gmail.com)
DOI: 10.5281/zenodo.5572041
title: Dataset from Holding et al. (2019)––Seasonal and spatial patterns of primary production in a high latitude fjord

description: Unprecedented melting of the Greenland Ice Sheet (GrIS) is impacting the coastal ocean, and its effects on fjord ecology remain understudied. It has been suggested that as glaciers retreat, primary production regimes may be altered, rendering fjords less productive. Here we present data from the paper Holding et al. (2019). Seasonal and spatial patterns of primary production in a high-latitude fjord affected by Greenland Ice Sheet run-off. <em>Biogeosciences</em>, <em>16</em>(19), 3777-3792, /doi.org/10.5194/bg-16-3777-2019. This paper investigates patterns of primary productivity in a northeast Greenland fjord (Young Sound, 74°N), which receives run-off from the GrIS via land-terminating glaciers. This dataset includes measures of size fractioned primary production and chlorophyll <em>a </em>biomass, as well as CTD data and biochemical parameters. Furthermore, primary production was measured using photosynthesis v. irradiance (PI) curves, thus PI curve parameters are also available. The data were taken during the ice-free season along a spatial gradient of meltwater influence. We thank Egon Frandsen, Kunuk Lennert, and Ivali Lennert for excellent assistance during fieldwork. This research has beensupported by the Danish Environmental Protection Agency’s programme for Arctic research (DANCEA) (grant no. MST-112-0023), The Carlsberg Foundation (grant no. 2013_01_0532), the Norwegian Research Council (Mi- croPolar) (grant no. RCN 225956), and the European Commission, H2020 Research Infrastructures (GrIS-Melt (grant no. 752325) and INTAROS (grant no. 727890)).
description: {"references": ["Holding, J. M., Markager, S., Juul-Pedersen, T., Paulsen, M. L., M\u00f8ller, E. F., Meire, L., & Sejr, M. K. (2019). Seasonal and spatial patterns of primary production in a high-latitude fjord affected by Greenland Ice Sheet run-off. Biogeosciences, 16(19), 3777-3792. doi.org/10.5194/bg-16-3777-2019"]}
DOI: 10.5281/zenodo.5572040
title: Dataset from Holding et al. (2019)––Seasonal and spatial patterns of primary production in a high latitude fjord

description: Unprecedented melting of the Greenland Ice Sheet (GrIS) is impacting the coastal ocean, and its effects on fjord ecology remain understudied. It has been suggested that as glaciers retreat, primary production regimes may be altered, rendering fjords less productive. Here we present data from the paper Holding et al. (2019). Seasonal and spatial patterns of primary production in a high-latitude fjord affected by Greenland Ice Sheet run-off. <em>Biogeosciences</em>, <em>16</em>(19), 3777-3792, /doi.org/10.5194/bg-16-3777-2019. This paper investigates patterns of primary productivity in a northeast Greenland fjord (Young Sound, 74°N), which receives run-off from the GrIS via land-terminating glaciers. This dataset includes measures of size fractioned primary production and chlorophyll <em>a </em>biomass, as well as CTD data and biochemical parameters. Furthermore, primary production was measured using photosynthesis v. irradiance (PI) curves, thus PI curve parameters are also available. The data were taken during the ice-free season along a spatial gradient of meltwater influence. We thank Egon Frandsen, Kunuk Lennert, and Ivali Lennert for excellent assistance during fieldwork. This research has beensupported by the Danish Environmental Protection Agency’s programme for Arctic research (DANCEA) (grant no. MST-112-0023), The Carlsberg Foundation (grant no. 2013_01_0532), the Norwegian Research Council (Mi- croPolar) (grant no. RCN 225956), and the European Commission, H2020 Research Infrastructures (GrIS-Melt (grant no. 752325) and INTAROS (grant no. 727890)).
description: {"references": ["Holding, J. M., Markager, S., Juul-Pedersen, T., Paulsen, M. L., M\u00f8ller, E. F., Meire, L., & Sejr, M. K. (2019). Seasonal and spatial patterns of primary production in a high-latitude fjord affected by Greenland Ice Sheet run-off. Biogeosciences, 16(19), 3777-3792. doi.org/10.5194/bg-16-3777-2019"]}
DOI: 10.5281/zenodo.5713776
title: Dataset from Holding et al. (2019)––Seasonal and spatial patterns of primary production in a high latitude fjord

description: Unprecedented melting of the Greenland Ice Sheet (GrIS) is impacting the coastal ocean, and its effects on fjord ecology remain understudied. It has been suggested that as glaciers retreat, primary production regimes may be altered, rendering fjords less productive. Here we present data from the paper Holding et al. (2019). Seasonal and spatial patterns of primary production in a high-latitude fjord affected by Greenland Ice Sheet run-off. <em>Biogeosciences</em>, <em>16</em>(19), 3777-3792, /doi.org/10.5194/bg-16-3777-2019. This paper investigates patterns of primary productivity in a northeast Greenland fjord (Young Sound, 74°N), which receives run-off from the GrIS via land-terminating glaciers. This dataset includes measures of size fractioned primary production and chlorophyll <em>a </em>biomass, as well as CTD data and biochemical parameters. Furthermore, primary production was measured using photosynthesis v. irradiance (PI) curves, thus PI curve parameters are also available. The data were taken during the ice-free season along a spatial gradient of meltwater influence. We thank Egon Frandsen, Kunuk Lennert, and Ivali Lennert for excellent assistance during fieldwork. This research has beensupported by the Danish Environmental Protection Agency’s programme for Arctic research (DANCEA) (grant no. MST-112-0023), The Carlsberg Foundation (grant no. 2013_01_0532), the Norwegian Research Council (Mi- croPolar) (grant no. RCN 225956), and the European Commission, H2020 Research Infrastructures (GrIS-Melt (grant no. 752325) and INTAROS (grant no. 727890)).
description: {"references": ["Holding, J. M., Markager, S., Juul-Pedersen, T., Paulsen, M. L., M\u00f8ller, E. F., Meire, L., & Sejr, M. K. (2019). Seasonal and spatial patterns of primary production in a high-latitude fjord affected by Greenland Ice Sheet run-off. Biogeosciences, 16(19), 3777-3792. doi.org/10.5194/bg-16-3777-2019"]}
DOI: 10.5281/zenodo.5572328
title: CTD Profiles from the HDMS Lauge Koch cruise to East Greenland fjords, August 2018

description: Greenland fjords are currently undergoing large ecosystem changes due to unprecedented melting of the Greenland Ice Sheet (GrIS). The rapidly increasing discharge of meltwater and ice not only influences circulation patterns and stratification of the water column, but it also introduces large fluxes of allochthonous carbon and nutrients into the Greenland coastal environment, as well as transports large quantities of inorganic particles and suspended sediments which could limit light availability to primary producers. However, data is still limited for most Greenland fjord systems and the east coast of Greenland is especially understudied. During this cruise we investigated 3 different fjord systems of East Greenland in August 2018 aboard the HDMS Lauge Koch. We aimed to describe the physical, chemical and biological variability from glaciers to the shelf. This data set consists of 84 CTD profiles that were obtained with a Seabird SBE25 conductivity, temperature, depth (CTD) instrument. In addition to measuring pressure, conductivity, and temperature, the CTD recorded chlorophyll-a fluorescence, photosynthetically available radiation (PAR), dissolved oxygen, turbidity and pH. The instrument was factory calibrated before the cruise. The CTD recorded variables at 16 Hz and the raw data were processed using Seabird standard workflow to produce 0.1 m binned profiles using the downcast data only. This dataset compiles all CTD variables measured from all profiles into a single comma separated CSV file. We would like to thank the captain and crew of HDMS Lauge Koch for excellent collaboration. The cruise was funded by the Danish Center for Marine Research and by the EU Horizon2020 funded project INTAROS (grant no. 727890) and the Danish Cooperation for Environment in the Arctic.
DOI: 10.5281/zenodo.7299985
title: microRNAs are abundant and stable in Platelet-rich fibrin and other autologous blood products of canines

description: Regenerative properties and clinical adaptability of platelet-rich fibrin have been discussed in previous human research, but information about its composition in animals is lacking. It has been reported that microRNAs play an essential role in wound healing and inflammatory process. In this study, we reported the presence of various microRNAs in the platelet-rich fibrin and other autologous blood products of canines, including confirmed stability properties. We believe this research might be a step forward in understanding the regenerative mechanisms and adapting new therapy methods that can be used in humans and animals based on One Health principles.
DOI: 10.5281/zenodo.7299984
title: microRNAs are abundant and stable in Platelet-rich fibrin and other autologous blood products of canines

description: Regenerative properties and clinical adaptability of platelet-rich fibrin have been discussed in previous human research, but information about its composition in animals is lacking. It has been reported that microRNAs play an essential role in wound healing and inflammatory process. In this study, we reported the presence of various microRNAs in the platelet-rich fibrin and other autologous blood products of canines, including confirmed stability properties. We believe this research might be a step forward in understanding the regenerative mechanisms and adapting new therapy methods that can be used in humans and animals based on One Health principles.
DOI: 10.7294/19350959.v2
title: VLM and Horizontal velocity Data for US Atlantic coast

description: Vertical land motion (VLM) in cm/year for the US east coast. More details on the README file downloadable with the data.
DOI: 10.7294/19350959.v1
title: VLM Data for US Atlantic coast

description: The .txt files contain the Vertical land motion (VLM) in cm/year for 13 states on the US east coast. More details on the README file downloadable with the data.
DOI: 10.5281/zenodo.7299064
title: FD-DeepLoc datasets: demo3 dataset

description: Experimental DMO-Tetrapod PSF (3μm) neuron dataset (fig.6).
DOI: 10.5281/zenodo.7299063
title: FD-DeepLoc datasets: demo3 dataset

description: Experimental DMO-Tetrapod PSF (3μm) neuron dataset (fig.6).
DOI: 10.6084/m9.figshare.21508071
title: PRISMA-ScR checklist for ‘Barriers faced by medical students in seeking mental healthcare: A scoping review’.

description: PRISMA checklist
DOI: 10.25612/837.j3lwpeq7xgaj
title: Census 2010 data for Harris County, Texas, USA

description: Demographic data on age, race/ethnicity, sex, education, families, households, housing units, tenure, and poverty level for Harris County (TX) from 2010 Census data.
DOI: 10.6084/m9.figshare.19640016.v1
title: Raw files of protein and phosphopeptides quantitation

description: Raw files of protein and phosphopeptides quantitation
DOI: 10.6073/pasta/92e7477a4bbe26d31c923ab58509b81d
title: Sediment organic matter and infauna at eight sites on the Virginia Coast, 2016 and 2019

description: To determine how oysters impact the spatial distribution of infauna and sediment composition through ecosystem engineering, we sampled 8 intertidal mud- flats adjacent to oyster reefs in coastal Virginia, USA. This work describes how local site characteristics, including distance to oysters, elevation, and hydrodynamics, influence infaunal community structure and sediment composition.
DOI: 10.5281/zenodo.7300160
title: Singlet oxygen production from molecules present in brown carbon

description: Data related to the quantification of singlet oxygen, the first excited state of molecule O<sub>2</sub>, using furfuryl alcohol as a probe. There are two files: the first tabulates the measurements of furfuryl alcohol decay measured by HPLC and the second records the absorbance measurements of the sensitizers.
DOI: 10.5281/zenodo.7300159
title: Singlet oxygen production from molecules present in brown carbon

description: Data related to the quantification of singlet oxygen, the first excited state of molecule O<sub>2</sub>, using furfuryl alcohol as a probe. There are two files: the first tabulates the measurements of furfuryl alcohol decay measured by HPLC and the second records the absorbance measurements of the sensitizers.
DOI: 10.5281/zenodo.7074347
title: Development of the multi-dimensional Mobility Divide Index as a methodology to assess the accessibility level of public transport systems

description: This paper presents the development of a multi-dimensional Mobility Divide Index (MDI) for assessing the accessibility of public transport developed using a co-design approach, directly involving end-users in the index design process. The index measures the gap that persons with disabilities feel they need to over-come to use public transport in the same way non-disabled citizens do. The MDI covers six accessibility-related dimensions: 1) safety, 2) convenience, 3) comfort, 4) affordability, 5) travel time, 6) autonomy. The method paper describes the step-by-step approach to create the MDI as a set of indicators to be rated by people with different access needs to a) provide evidence of the main criticalities to be addressed through the design and implementation of new inclusive mobility solutions, b) guide the design of new inclusive mobility solutions and measure their impacts and c) inform the transport sector encouraging positive changes in transport by providing recommendations for policy-making, new directions for service innovation, improvements and practical advice or highlighting investment priorities to pave the way for a more inclusive mobility. We present our findings in ways that can inform universal design and provide actionable information to researchers, policymakers, transport and urban planners, operators and stakeholders’ representatives to promote inclusive and equitable mobility solutions for all. Finally, we suggest follow up research and innovation, as well as recommendations for its uptake and utilisation in the pursuit of European accessibility standards and requirements for products and services in the mobility sector.