cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1247208.v1
title: Dartmouth stellar models triangulation

description: A python pickle file of a Qhull triangulation of mass, age, and metallicity of the Dartmouth stellar models. This file is meant to be downloaded and used by the 'isochrones' python module.
DOI: 10.6084/m9.figshare.1247137
title: ISI Web of Knowledge database - Search query "evidence based medicine" (Nov-20-2014) - 2001 to present.

description: ISI Web of Knowledge - Search query "evidence based medicine" (Nov-20-2014) - 2001 to present (Nov 2014). Database related to the following fileset: Ramirez, Jorge H (2014): Data (i.e., evidence) about evidence based medicine. fig<strong>share</strong>. <br>http://dx.doi.org/10.6084/m9.figshare.1093997
DOI: 10.6084/m9.figshare.1247196
title: Dartmouth stellar models

description: Dartmouth stellar models, compiled into a single file to be downloaded by the 'isochrones' python module.
DOI: 10.6084/m9.figshare.1247204.v1
title: Padova stellar model grid

description: Padova stellar model grid to be used by 'isochrones' python module (by automatic download).
DOI: 10.6084/m9.figshare.1247269.v1
title: Macrofungal diversity and ecology in two Mediterranean forest ecosystems

description: The macrofungal species richness and community assemblages in Italian native woodlands of oaks and <i>Carpinus betulus</i>, and non-native woodlands of <i>Pinus</i> spp., <i>Cupressus sempervirens</i> and <i>Eucalyptus camaldulensis</i> were examined through the collection of basidiomata and ascomata over 1 yr. The sampling in Collestrada (Umbria) and Pizzo Manolfo (Sicily) forests revealed 216 species of macrofungi.
DOI: 10.6084/m9.figshare.1247196.v1
title: Dartmouth stellar models

description: Dartmouth stellar models, compiled into a single file to be downloaded by the 'isochrones' python module.
DOI: 10.6084/m9.figshare.1247269
title: Macrofungal diversity and ecology in two Mediterranean forest ecosystems

description: The macrofungal species richness and community assemblages in Italian native woodlands of oaks and <i>Carpinus betulus</i> and non-native woodlands of <i>Pinus</i> spp., <i>Cupressus sempervirens</i> and <i>Eucalyptus camaldulensis</i> were examined through the collection of basidiomata and ascomata over 1 year. The sampling in Collestrada (Umbria) and Pizzo Manolfo (Sicily) forests revealed 216 species of macrofungi. The results indicate differences in macromycete richness and diversity patterns between the two sites. The dominant tree species of the two sites were different; thus, the Collestrada forests had higher mycorrhizal species richness, while the Pizzo Manolfo forest had a higher relative number of saprotroph macrofungi. The macrofungal community of <i>Quercus frainetto</i> woodland from Collestrada forest was richer and more diverse than the other site's woodland types. This study highlighted that both Collestrada and Pizzo Manolfo forests provide a habitat for diverse macrofungal species, not in the least ectomycorrhizal species.
DOI: 10.6084/m9.figshare.1246901
title: Holotype and paratypes of Invavita piratica

description: VAXML dataset of Nymphatelina gravida paratype OUMNH C.29678 with attached holotype of Invavita piratica OUMNH C.29677 and Invavita piratica paratypes OUMNH C.29679 and OUMNH C.29680. This dataset accompanies a manuscript published in Current Biology, and is fully described there.
DOI: 10.6084/m9.figshare.1246902
title: Posterior section of Nymphatelina gravida holotype

description: VAXML dataset of Nymphatelina gravida holotype OUMNH C.29600 with attached Invavita piratica OUMNH C.29681. This dataset accompanies a manuscript in Current Biology, and is fully described there.
DOI: 10.6084/m9.figshare.1246901.v1
title: Holotype and paratypes of Invavita piratica

description: VAXML dataset of Nymphatelina gravida paratype OUMNH C.29678 with attached holotype of Invavita piratica OUMNH C.29677 and Invavita piratica paratypes OUMNH C.29679 and OUMNH C.29680. This dataset accompanies a manuscript published in Current Biology, and is fully described there.
DOI: 10.6084/m9.figshare.1247269.v3
title: Macrofungal diversity and ecology in two Mediterranean forest ecosystems

description: The macrofungal species richness and community assemblages in Italian native woodlands of oaks and <i>Carpinus betulus</i> and non-native woodlands of <i>Pinus</i> spp., <i>Cupressus sempervirens</i> and <i>Eucalyptus camaldulensis</i> were examined through the collection of basidiomata and ascomata over 1 year. The sampling in Collestrada (Umbria) and Pizzo Manolfo (Sicily) forests revealed 216 species of macrofungi. The results indicate differences in macromycete richness and diversity patterns between the two sites. The dominant tree species of the two sites were different; thus, the Collestrada forests had higher mycorrhizal species richness, while the Pizzo Manolfo forest had a higher relative number of saprotroph macrofungi. The macrofungal community of <i>Quercus frainetto</i> woodland from Collestrada forest was richer and more diverse than the other site's woodland types. This study highlighted that both Collestrada and Pizzo Manolfo forests provide a habitat for diverse macrofungal species, not in the least ectomycorrhizal species.
DOI: 10.6084/m9.figshare.1246902.v1
title: Posterior section of Nymphatelina gravida holotype

description: VAXML dataset of Nymphatelina gravida holotype OUMNH C.29600 with attached Invavita piratica OUMNH C.29681. This dataset accompanies a manuscript in Current Biology, and is fully described there.
DOI: 10.6084/m9.figshare.1247269.v2
title: Macrofungal diversity and ecology in two Mediterranean forest ecosystems

description: The macrofungal species richness and community assemblages in Italian native woodlands of oaks and <i>Carpinus betulus</i> and non-native woodlands of <i>Pinus</i> spp., <i>Cupressus sempervirens</i> and <i>Eucalyptus camaldulensis</i> were examined through the collection of basidiomata and ascomata over 1 year. The sampling in Collestrada (Umbria) and Pizzo Manolfo (Sicily) forests revealed 216 species of macrofungi. The results indicate differences in macromycete richness and diversity patterns between the two sites. The dominant tree species of the two sites were different; thus, the Collestrada forests had higher mycorrhizal species richness, while the Pizzo Manolfo forest had a higher relative number of saprotroph macrofungi. The macrofungal community of <i>Quercus frainetto</i> woodland from Collestrada forest was richer and more diverse than the other site's woodland types. This study highlighted that both Collestrada and Pizzo Manolfo forests provide a habitat for diverse macrofungal species, not in the least ectomycorrhizal species.
DOI: 10.6084/m9.figshare.1246898
title: Biomedical publication and Attraction Score data based on PubMed searches

description: The database contains data about the volumes of biomedical publications by country. Review publications are generally excluded, unless otherwise specified. The data refer either to the general publications, the clinical trial-based publications or the publications on certain research areas or topics. Attraction Scores indicate the proportions of publications on certain research areas or topics relative to the total volumes of publications. The numbers of publications are also compared to general non-bibliometric indicators such as the country population, the GDP and the R&D expenditure. Database also contains estimates of the publications in English. Statistics about supra-national entities like continents or the European Union is also included.<br>The volumes of publications were determined by using the PubMed search engine. The data refer to time periods 1993-1997, 1998-2002, 2003-2007, 2008-2012 or the single year 2012. Several searches were made a first time in July-August 2013 and then repeated in September/October 2014 to check for the consistency of data over time.<br>The data are ranked according to different criteria. Columns/row headings describe the contents of the columns/rows.<br>A detailed description of the methodology and of the results is contained in the associated article. Only the first 15 sheets are pre-viewable, please download the file to see the complete database.
DOI: 10.6084/m9.figshare.1247137.v1
title: ISI Web of Knowledge - Search query "evidence based medicine" (Nov-20-2014) - Database of the top 500 most cited papers - 2001 to present (Nov 2014)

description: ISI Web of Knowledge - Search query "evidence based medicine" (Nov-20-2014) - Database of the top 500 most cited papers - 2001 to present (Nov 2014)
DOI: 10.6084/m9.figshare.1247137.v3
title: ISI Web of Knowledge database - Search query "evidence based medicine" (Nov-20-2014) - 2001 to present.

description: ISI Web of Knowledge - Search query "evidence based medicine" (Nov-20-2014) - 2001 to present (Nov 2014). Database related to the following fileset: Ramirez, Jorge H (2014): Data (i.e., evidence) about evidence based medicine. fig<strong>share</strong>. <br>http://dx.doi.org/10.6084/m9.figshare.1093997
DOI: 10.6084/m9.figshare.1247137.v2
title: ISI Web of Knowledge database - Search query "evidence based medicine" (Nov-20-2014) - 2001 to present (Nov 2014).

description: ISI Web of Knowledge - Search query "evidence based medicine" (Nov-20-2014) - 2001 to present (Nov 2014). Database related to the following fileset: Ramirez, Jorge H (2014): Data (i.e., evidence) about evidence based medicine. fig<strong>share</strong>. <br>http://dx.doi.org/10.6084/m9.figshare.1093997
DOI: 10.6084/m9.figshare.1246891
title: Construction of Unique Binary Tree

description: <strong>Construction of Unique Binary Tree from given given number of traversal </strong>
DOI: 10.6084/m9.figshare.1246878
title: MARINE AEROSOL FLUXES DETERMINED BY SIMULTANEOUS MEASUREMENTS OF EDDY COVARIANCE AND GRADIENT METHOD

description: In this paper there are presented results of the aerosol fluxes measurements in near water boundary layer. Measurements were conducted using two micrometeorological methods in the southern Baltic Sea region. The preliminary results of comparison two methods are discus. The eddy covariance (EC) method is shown as a method for the calibration of the gradient method (GM). The reason for proceeding with such calibration is to show that the GM, which is an indirect measuring method, is comparable with a direct method such as the EC. In the EC measurements the condensation particle counter (CPC, measuring range 0.05 – 3 µm with 1 Hz counting speed) and the Research Anemometer (50 Hz measurement speed) were used. For the GM, a Classical Scattering Aerosol Spectrometer was applied (measuring range from 0.5 to 47 µm diameter, within 36 measuring channels). Data from scientific cruises of the r/v Oceania in the southern Baltic Sea between 2008 and 2011 were analyzed.
DOI: 10.6084/m9.figshare.1246871
title: A systematic review of methods of uncertainty analysis and their applications in the assessment of chemical exposures, effects, and risks

description: Methods of uncertainty analysis are being included increasingly in regulatory chemical risk assessment. Although best practices have been established by several safety agencies in Europe and the United States, they exist only in the grey literature – there has been no comprehensive analysis of the scientific, peer-reviewed literature on these methods. We therefore conducted a systematic review of the recent peer-reviewed literature (2007–2013) on uncertainty analysis relevant to chemical risks. The main objective was to determine whether current methods are robust enough for regulatory use, because the methods used to protect public health must meet the most stringent scientific standards. Based on 297 papers, we concluded that the peer-reviewed literature is much more critical about the disadvantages of those methods, compared to the grey literature. Furthermore, uncertainty analyses can be influenced significantly by subjective expert judgment. As a suggested improvement, we developed guidelines for transparent reporting of uncertainty assessment results.
DOI: 10.6084/m9.figshare.1246891.v2
title: Construction of Unique Binary Tree

description: <strong>Construction of Unique Binary Tree from given given number of traversal </strong>
DOI: 10.6084/m9.figshare.1246878.v1
title: MARINE AEROSOL FLUXES DETERMINED BY SIMULTANEOUS MEASUREMENTS OF EDDY COVARIANCE AND GRADIENT METHOD

description: In this paper there are presented results of the aerosol fluxes measurements in near water boundary layer. Measurements were conducted using two micrometeorological methods in the southern Baltic Sea region. The preliminary results of comparison two methods are discus. The eddy covariance (EC) method is shown as a method for the calibration of the gradient method (GM). The reason for proceeding with such calibration is to show that the GM, which is an indirect measuring method, is comparable with a direct method such as the EC. In the EC measurements the condensation particle counter (CPC, measuring range 0.05 – 3 µm with 1 Hz counting speed) and the Research Anemometer (50 Hz measurement speed) were used. For the GM, a Classical Scattering Aerosol Spectrometer was applied (measuring range from 0.5 to 47 µm diameter, within 36 measuring channels). Data from scientific cruises of the r/v Oceania in the southern Baltic Sea between 2008 and 2011 were analyzed.
DOI: 10.6084/m9.figshare.1246891.v1
title: Construction of Unique Binary Tree

description: <strong>Construction of Unique Binary Tree from given given number of traversal </strong>
DOI: 10.6084/m9.figshare.1246868
title: Both HMG boxes in Hmo1 are essential for DNA binding <i>in vitro</i> and <i>in vivo</i>

description: Hmo1, a member of the high mobility group B family proteins in <i>Saccharomyces cerevisiae</i>, associates with the promoters of ribosomal protein genes (RPGs) to direct accurate transcriptional initiation. Here, to identify factors involved in the binding of Hmo1 to its targets and the mechanism of Hmo1-dependent transcriptional initiation, we developed a novel reporter system using the promoter of the RPG <i>RPS5</i>. A genetic screen did not identify any factors that influence Hmo1 binding, but did identify a number of mutations in Hmo1 that impair its DNA binding activity <i>in vivo</i> and <i>in vitro</i>. These results suggest that Hmo1 binds to its target promoters autonomously without any aid of additional factors. Furthermore, characterization of Hmo1 mutants showed that the box A domain plays a pivotal role in DNA binding and may be required for the recognition of structural properties of target promoters that occur in native chromatin.
DOI: 10.6084/m9.figshare.1246871.v2
title: A systematic review of methods of uncertainty analysis and their applications in the assessment of chemical exposures, effects, and risks

description: Methods of uncertainty analysis are being included increasingly in regulatory chemical risk assessment. Although best practices have been established by several safety agencies in Europe and the United States, they exist only in the grey literature – there has been no comprehensive analysis of the scientific, peer-reviewed literature on these methods. We therefore conducted a systematic review of the recent peer-reviewed literature (2007–2013) on uncertainty analysis relevant to chemical risks. The main objective was to determine whether current methods are robust enough for regulatory use, because the methods used to protect public health must meet the most stringent scientific standards. Based on 297 papers, we concluded that the peer-reviewed literature is much more critical about the disadvantages of those methods, compared to the grey literature. Furthermore, uncertainty analyses can be influenced significantly by subjective expert judgment. As a suggested improvement, we developed guidelines for transparent reporting of uncertainty assessment results.
DOI: 10.6084/m9.figshare.1246871.v1
title: A systematic review of methods of uncertainty analysis and their applications in the assessment of chemical exposures, effects, and risks

description: Methods of uncertainty analysis are being included increasingly in regulatory chemical risk assessment. Although best practices have been established by several safety agencies in Europe and the United States, they exist only in the grey literature – there has been no comprehensive analysis of the scientific, peer-reviewed literature on these methods. We therefore conducted a systematic review of the recent peer-reviewed literature (2007–2013) on uncertainty analysis relevant to chemical risks. The main objective was to determine whether current methods are robust enough for regulatory use, because the methods used to protect public health must meet the most stringent scientific standards. Based on 297 papers, we concluded that the peer-reviewed literature is much more critical about the disadvantages of those methods, compared to the grey literature. Furthermore, uncertainty analyses can be influenced significantly by subjective expert judgment. As a suggested improvement, we developed guidelines for transparent reporting of uncertainty assessment results.
DOI: 10.6084/m9.figshare.1246873.v1
title: TestRoots

description: Data related to the TestRoots project (www.testroots.org)
DOI: 10.6084/m9.figshare.1246868.v1
title: Both HMG boxes in Hmo1 are essential for DNA binding <i>in vitro</i> and <i>in vivo</i>

description: Hmo1, a member of the high mobility group B family proteins in <i>Saccharomyces cerevisiae</i>, associates with the promoters of ribosomal protein genes (RPGs) to direct accurate transcriptional initiation. Here, to identify factors involved in the binding of Hmo1 to its targets and the mechanism of Hmo1-dependent transcriptional initiation, we developed a novel reporter system using the promoter of the RPG <i>RPS5</i>. A genetic screen did not identify any factors that influence Hmo1 binding, but did identify a number of mutations in Hmo1 that impair its DNA binding activity <i>in vivo</i> and <i>in vitro</i>. These results suggest that Hmo1 binds to its target promoters autonomously without any aid of additional factors. Furthermore, characterization of Hmo1 mutants showed that the box A domain plays a pivotal role in DNA binding and may be required for the recognition of structural properties of target promoters that occur in native chromatin.
DOI: 10.6084/m9.figshare.1246868.v3
title: Both HMG boxes in Hmo1 are essential for DNA binding <i>in vitro</i> and <i>in vivo</i>

description: Hmo1, a member of the high mobility group B family proteins in <i>Saccharomyces cerevisiae</i>, associates with the promoters of ribosomal protein genes (RPGs) to direct accurate transcriptional initiation. Here, to identify factors involved in the binding of Hmo1 to its targets and the mechanism of Hmo1-dependent transcriptional initiation, we developed a novel reporter system using the promoter of the RPG <i>RPS5</i>. A genetic screen did not identify any factors that influence Hmo1 binding, but did identify a number of mutations in Hmo1 that impair its DNA binding activity <i>in vivo</i> and <i>in vitro</i>. These results suggest that Hmo1 binds to its target promoters autonomously without any aid of additional factors. Furthermore, characterization of Hmo1 mutants showed that the box A domain plays a pivotal role in DNA binding and may be required for the recognition of structural properties of target promoters that occur in native chromatin.
DOI: 10.6084/m9.figshare.1246868.v2
title: Both HMG boxes in Hmo1 are essential for DNA binding <i>in vitro</i> and <i>in vivo</i>

description: Hmo1, a member of the high mobility group B family proteins in <i>Saccharomyces cerevisiae</i>, associates with the promoters of ribosomal protein genes (RPGs) to direct accurate transcriptional initiation. Here, to identify factors involved in the binding of Hmo1 to its targets and the mechanism of Hmo1-dependent transcriptional initiation, we developed a novel reporter system using the promoter of the RPG <i>RPS5</i>. A genetic screen did not identify any factors that influence Hmo1 binding, but did identify a number of mutations in Hmo1 that impair its DNA binding activity <i>in vivo</i> and <i>in vitro</i>. These results suggest that Hmo1 binds to its target promoters autonomously without any aid of additional factors. Furthermore, characterization of Hmo1 mutants showed that the box A domain plays a pivotal role in DNA binding and may be required for the recognition of structural properties of target promoters that occur in native chromatin.
DOI: 10.6084/m9.figshare.1246840
title: Distribution data for two Alpine moth species in Australia.

description: Distribution data for two Alpine moth species in Australia. Details of collection in Parida, M., Hoffmann, A. A., Hill, M. P. (2015), Climate change expected to drive habitat loss for two key herbivore species in an alpine environment. Journal of Biogeography. doi: 10.1111/jbi.12490
DOI: 10.6084/m9.figshare.1246840.v1
title: Distribution data for two Alpine moth species in Australia.

description: Distribution data for two Alpine moth species in Australia. Details of collection in Parida, M., Hoffmann, A. A., Hill, M. P. (2015), Climate change expected to drive habitat loss for two key herbivore species in an alpine environment. Journal of Biogeography. doi: 10.1111/jbi.12490
DOI: 10.6084/m9.figshare.1246835
title: FICHA DE RIESGO QUIMICO CLORO

description: FICHA DE RIESGO QUIMICO
DOI: 10.6084/m9.figshare.1246795
title: AMIANTO . EL COMERCIO DE LA MUERTE

description: Análisis del documental LA TRAMA DEL AMIANTO
DOI: 10.6084/m9.figshare.1246794
title: Floristic survey of Restinga Forests in southern Bahia reveals the effect of geography on community composition

description: The Restinga forests of southern Bahia are found over coastal sandy Quaternary sediments. Their flora is poorly known and the present study aimed to assess their floristic composition. We surveyed four sites at Maraú and Itacaré municipalities and identified 302 angiosperm species belonging to 184 genera of 75 families. The species richest families were Fabaceae (35 species), Myrtaceae (25), Rubiaceae (21), Sapotaceae (13), Bromeliaceae (12), Annonaceae (11), Erythroxylaceae (10), Melastomataceae (9), and Apocynaceae (8). Local flora includes elements with distribution restricted to Mata Atlântica domain, disjunct between Amazon and Mata Atlântica domains, and those occupying moist forests and dry vegetation of central Brazil. We also tested the hypothesis that floristic composition of the Restinga forests is influenced by geographically close wet forests through cluster and principal component analyzes with eleven Restinga forest and nine wet forest of Mata Atlântica domain sites. The results support five main groups, most of them include both Restinga forest sites and adjacent wet forests, thus corroborating the hypothesis that geographical proximity to floristic stock of wet forests have great influence in floristic composition of Restinga forests. This is the supplementary material cited on the paper.