cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p9z8379y
title: Lakebed features extracted from single-beam sonar in two Laurentian Great Lakes

description: Acoustic seabed classification (ASC) is an important method for understanding landscape-level physical and biological patterns in the aquatic environment. Bottom habitats in the Laurentian Great Lakes are poorly mapped to date, and will require a variety of contributors and data sources to complete. We repurposed a long-term split-beam echosounder dataset gathered for purposes of fisheries assessment to estimate lakebed properties utilizing unsupervised classification of echo return data. We extracted first echo properties and analyzed lakebed hardness and roughness to define and map three statistically supported lakebed classes revealed through cluster analysis. Our results indicate coherent and logical class boundaries, and suggest that the dataset has promise for expanded use in ASC.
DOI: 10.5287/bodleian:y0e8kwjqr
title: Raw data for article tunable volatility of Ge2Sb2Te5 in integrated photonics

description: Data was captured with homebuilt optical data acquisition setup and plotted in OriginLabs software (needed to open this file).
DOI: 10.5066/p93ag4sm
title: Larval lake whitefish diets in western Lake Erie during 2018, 2019, and 2021

description: Recent declines in Lake Whitefish population abundance has prompted research to identify underlying mechanisms controlling survival of early life stages in the Great Lakes. In Lake Erie, the recruitment bottleneck window determining year class strength of Lake Whitefish occurs during the first growing season, suggesting that availability of prey could be controlling year class strength. Therefore, spatial and seasonal larval Lake Whitefish distribution, diet, and environmental zooplankton (potential prey) were collected to evaluate larval Lake Whitefish diets at 31 locations in the western basin during 2017, 2018, and 2021. We removed gut tracks of larval lake whitefish and identified diet items to lowest possible taxon. Zooplankton samples were taken in the field and identified in the lab. Zooplankton were identified to the taxonomic level of large cladoceran, small cladoceran, cyclopoid copepods, calanoid copepods, nauplii, and rotifer. Diet item body length was measured for the first 20 individuals of each prey item in each sample.
DOI: 10.5281/zenodo.15053811
title: IODP Expedition 395 Closeup images

description: Close-up images taken by digital cameras as requested by the science party, typically when the section-half image is not sufficient. Close-up photographs of the areas of interest may be taken from whole-round sections, pieces, or section halves in sediments and rock.
DOI: 10.5281/zenodo.15053812
title: IODP Expedition 395 Closeup images

description: Close-up images taken by digital cameras as requested by the science party, typically when the section-half image is not sufficient. Close-up photographs of the areas of interest may be taken from whole-round sections, pieces, or section halves in sediments and rock.
DOI: 10.5066/p9x6wrvx
title: Lake Michigan juvenile lake trout diets 2015-2017, 2019-2022

description: These data consist of juvenile lake trout biological and diet information collected from USGS bottom trawl, beam trawl, and gillnet surveys in Lake Michigan from 2015-2017 and 2019-2022. All prey were identified, enumerated and weighed. Only fish prey and Mysis had lengths measured.
DOI: 10.5281/zenodo.15012264
title: Data for "Species responses to weather anomalies depend on local adaptation and range position"

description: This dataset contains the data required to replicate the analyses presented in the manuscript entitled "Species responses to weather anomalies depend on local adaptation and range position." It includes information on species, category, abundance, site, the value of the climatic anomaly at the site, the specific climatic variable of interest, and the standardized bioclimatic range position of the population.

Raw data, including counts, georeferenced locations, and dates are available from the European Butterfly Monitor Scheme via a signed license agreement (https://butterfly-monitoring.net/). Climatic data are available via ECAD website (https://www.ecad.eu/).
DOI: 10.5281/zenodo.15012265
title: Data for "Species responses to weather anomalies depend on local adaptation and range position"

description: This dataset contains the data required to replicate the analyses presented in the manuscript entitled "Species responses to weather anomalies depend on local adaptation and range position." It includes information on species, category, abundance, site, the value of the climatic anomaly at the site, the specific climatic variable of interest, and the standardized bioclimatic range position of the population.

Raw data, including counts, georeferenced locations, and dates are available from the European Butterfly Monitor Scheme via a signed license agreement (https://butterfly-monitoring.net/). Climatic data are available via ECAD website (https://www.ecad.eu/).
DOI: 10.5517/ccdc.csd.cc2byx7g
title: CCDC 2173696: Experimental Crystal Structure Determination

description: Related Article: Wenting Sun, Jiaxiang Guo, Zengming Fan, Liuzhong Yuan, Kaiqi Ye, Chuandong Dou, Yue Wang|2022|Angew.Chem.,Int.Ed.|61|e202209271|doi:10.1002/anie.202209271
description: Related Article: Wenting Sun|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2byxs0
title: CCDC 2173713: Experimental Crystal Structure Determination

description: Related Article: Wenting Sun, Jiaxiang Guo, Zengming Fan, Liuzhong Yuan, Kaiqi Ye, Chuandong Dou, Yue Wang|2022|Angew.Chem.,Int.Ed.|61|e202209271|doi:10.1002/anie.202209271
description: Related Article: Wenting Sun|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c5kdj
title: CCDC 2180087: Experimental Crystal Structure Determination

description: Related Article: Sateesha M. Kannakatte, Mahesha, Mounesh, Lokanath K. Neratur, Amshumali K. Mungalimane|2023|Mater.Chem.Phys.|301|127577|doi:10.1016/j.matchemphys.2023.127577
description: Related Article: Mahesha|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c0x8l
title: CCDC 2175619: Experimental Crystal Structure Determination

description: Related Article: Changjiang Yu|2022|CSD Communication|||
description: Related Article: Changjiang Yu, Yingzhu Sun, Xingbao Fang, Jiazhu Li, Qinghua Wu, Weibin Bu, Xing Guo, Hua Wang, Lijuan Jiao, Erhong Hao|2022|Inorg.Chem.|61|16718|doi:10.1021/acs.inorgchem.2c02517
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d0pqv
title: CCDC 2205207: Experimental Crystal Structure Determination

description: Related Article: Liu Naifang|2022|CSD Communication|||
description: Related Article: Naifang Liu, Hailong Chen, Jie Su, Yuxiang Weng, Jagadese J. Vittal, Sheng-Li Huang, Jianzhuang Jiang|2024|Inorg.Chem.|63|4691|doi:10.1021/acs.inorgchem.3c04313
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.6sjzhm
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Specimen)",
 "TaxonKey is Pseudalopex griseus (Gray, 1837)",
 "Year 1970-2025"
 ]
}

 The dataset includes 32 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020736-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uvh82a
title: Occurrence Download

description: A dataset containing 2995949 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Base de datos biogeográfica del Fondo de Investigación Pesquera y de Acuicultura (1999-2019), Subsecretaría de Pesca y Acuicultura"
 ]
}

 The dataset includes 2995949 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020733-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28640483
title: High abundance of Archean zircons in Ordovician sandstones in Zealandia: A response to Hirnantian Glaciation?tled Item

description: In the Takaka Terrane of South Island, New Zealand, Wangapeka Formation (Katian to Hirnantian) quartz sandstones contain detrital zircons with strikingly high (15-25%) proportions of early Paleoproterozoic and Archean ages, levels not seen elsewhere in early Paleozoic rocks of Zealandia and southeast Australia. It is proposed that the sudden appearance of these old zircons, and their equally rapid decline in the Silurian, reflects sea-level fall during the Hirnantian Glaciation which stimulated erosion of a hitherto hidden, local ancient basement complex.
DOI: 10.6084/m9.figshare.28640483.v1
title: High abundance of Archean zircons in Ordovician sandstones in Zealandia: A response to Hirnantian Glaciation?tled Item

description: In the Takaka Terrane of South Island, New Zealand, Wangapeka Formation (Katian to Hirnantian) quartz sandstones contain detrital zircons with strikingly high (15-25%) proportions of early Paleoproterozoic and Archean ages, levels not seen elsewhere in early Paleozoic rocks of Zealandia and southeast Australia. It is proposed that the sudden appearance of these old zircons, and their equally rapid decline in the Silurian, reflects sea-level fall during the Hirnantian Glaciation which stimulated erosion of a hitherto hidden, local ancient basement complex.
DOI: 10.15468/dl.ffw844
title: Occurrence Download

description: A dataset listing the 4032867 species recorded in GBIF matching the query:
{
 "OccurrenceStatus" : [
 "is Present"
 ]
}

 The dataset's 4032867 records were derived from 71884 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020729-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xnymfb
title: Occurrence Download

description: A dataset containing 258634 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Specimen)",
 "TaxonKey is Rattus norvegicus (Berkenhout, 1769)",
 "Year 1970-2025"
 ]
}

 The dataset includes 258634 records from 1088 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020718-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ncxxbm
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Nectaroscordum insubricum (Boiss. & Reut.) Galasso & Banfi, Allium insubricum Boiss. & Reut.)",
 "Year 1960-2025"
 ]
}

 The dataset includes 43 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020738-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9qunpu
title: Occurrence Download

description: A dataset containing 650 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Quercus deserticola Trel."
 ]
}

 The dataset includes 650 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020739-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25340/r4/1ubota
title: Related Data for: Narrowing the coordination solution space during motor learning standardizes individual patterns of search strategy but diversifies learning rates

description: Constraints on practice can benefit motor learning by guiding the learner towards efficient coordination patterns, but can also narrow the potential solution space of coordination and control. The aim of this paper was to investigate whether narrowing the solution space through more restrictive task constraints limits the expression of potential exploratory behaviours during the learning process, identified using Drifting Markov Models. In a breaststroke swimming task, the change in interlimb coordination of 7 learners practicing for 16 lessons over 2 months was analysed to quantify motor exploration and identify periods of metastable regimes of coordination. Results showed that the observed exploratory dynamics were highly individual both in terms of range of exploration and in the patterns of search. The more restrictive task constraints did not impair the amount of exploration but rather channelled the exploration around a few selected patterns. In addition, restraining the nature of the exploratory process increased the inter-individual differences of the learning rate. Although manipulating the task constraints during learning can help learners to escape from the behavioural consequences of their intrinsic dynamics, maintaining a broad solution space for a diversity of coordination patterns to emerge was key to fostering effective exploration of individual coordination solutions.
DOI: 10.6096/1023
title: Soil Map, Soil Profiles description, Soil parameters, Auradé 

description: A report (Party, Muller, Probst, 2006) presents the soil map of the Auradé catchment performed in 2005. It mentions the location and the description of the soil profiles as well as the auger sampling used to draw the soil map. The description of soil layers and their physico-chemical characteristics as well as analytical methods are detailed in the excel file. SIG files are also associated.   In the spatial extent below only the soil profiles are indicated (photos in the report).
DOI: 10.15468/dl.a7dwux
title: Occurrence Download

description: A dataset containing 625 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-97.0303 41.48978,-90.56149 41.48978,-90.56149 48.97673,-97.0303 48.97673,-97.0303 41.48978))",
 "TaxonKey is Ulmus pumila L."
 ]
}

 The dataset includes 625 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020740-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15064942
title: Theoretical structural models of the anthozoan-specific opsin II Antho2a (wild type with Glu292 either neutral or negatively charged and the E292A mutant).

description: Three-dimensional structures (PDB files) of the anthozoan-specific opsin II Antho2a. The models are: i) wild type Antho2a with a neutral Glu292, ii) wild type Antho2a with a charged Glu292, and iii) the Antho2a E292A mutant.
DOI: 10.5281/zenodo.15064943
title: Theoretical structural models of the anthozoan-specific opsin II Antho2a (wild type with Glu292 either neutral or negatively charged and the E292A mutant).

description: Three-dimensional structures (PDB files) of the anthozoan-specific opsin II Antho2a. The models are: i) wild type Antho2a with a neutral Glu292, ii) wild type Antho2a with a charged Glu292, and iii) the Antho2a E292A mutant.
DOI: 10.5281/zenodo.15059555
title: Gene coverage of multiple datasets

description: This is a convenience table that combines data from JUMP, Periscope and others to make it simple to query. The code that produces can be found on this github gist.
DOI: 10.5281/zenodo.15065565
title: POPC Sage 2.2.0 with Espaloma charges
DOI: 10.5281/zenodo.15065566
title: POPC Sage 2.2.0 with Espaloma charges
DOI: 10.5281/zenodo.15065576
title: Gene coverage of multiple datasets

description: This is a convenience table that combines data from JUMP, Periscope and others to make it simple to query. The code that produces can be found on this github gist.
DOI: 10.15468/dl.9r6yyy
title: Occurrence Download

description: A dataset containing 839 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Occurrence evidence)",
 "Continent is South America",
 "Country is one of (Peru, Brazil, Argentina, Paraguay, Bolivia (Plurinational State of))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chrysocyon brachyurus (Illiger, 1815)"
 ]
}

 The dataset includes 839 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020741-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uxhgqf
title: Occurrence Download

description: A dataset containing 197 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lestrimelitta danuncia F.F.Oliveira & Marchi, 2005"
 ]
}

 The dataset includes 197 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020742-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26030/an6e-s480
title: RNA-seq analysis in simulated microgravity unveils down-regulation of the beta-rhizobial siderophore phymabactin.

description: Exploiting the symbiotic interaction between crops and nitrogen-fixing bacteria is a simple and ecological method to promote plant growth in prospective extraterrestrial human outposts. In this study, we performed an RNA-seq analysis to investigate the adaptation of the legume symbiont Paraburkholderia phymatum STM815^T to simulated microgravity (s0-g) at the transcriptome level. The results revealed a drastic effect on gene expression, with roughly 23% of P. phymatum genes being differentially regulated in s0-g. Among those, 951 genes were upregulated and 858 downregulated in the cells grown in s0-g compared to terrestrial gravity (1 g). Several genes involved in posttranslational modification, protein turnover or chaperones encoding were upregulated in s0-g, while those involved in translation, ribosomal structure and biosynthesis, motility or inorganic ions transport were downregulated. Specifically, the whole phm gene cluster, previously bioinformatically predicted to be involved in the production of a hypothetical malleobactin-like siderophore, phymabactin, was 20-fold downregulated in microgravity. By constructing a mutant strain (delta phmJK) we confirmed that the phm gene cluster codes for the only siderophore secreted by P. phymatum as assessed by the complete lack of iron chelating activity of the P. phymatum delta phmJK mutant on chrome azurol S (CAS) agar plates. These results not only provide a deeper understanding of the physiology of symbiotic organisms exposed to space-like conditions, but also increase our knowledge of iron acquisition mechanisms in rhizobia.
DOI: 10.5281/zenodo.15047844
title: Compound flood simulations for 5000 Compound events for Gloucester City (NJ) Part 1

description: This dataset contains the resuls of 5000 compound flood simulations generated using SFINCS for the catchments of Gloucester City (NJ). The 5000 compound synthetic events were generated using the approach of Maduwantha et al., 2025. Details about the SIFINCS model and the compound flood data can be found in Santamaria-Aguilar et al., 2025. Part 2 can be found in 10.5281/zenodo.15065555
DOI: 10.5281/zenodo.15047845
title: Compound flood simulations for 5000 Compound events for Gloucester City (NJ) Part 1

description: This dataset contains the resuls of 5000 compound flood simulations generated using SFINCS for the catchments of Gloucester City (NJ). The 5000 compound synthetic events were generated using the approach of Maduwantha et al., 2025. Details about the SIFINCS model and the compound flood data can be found in Santamaria-Aguilar et al., 2025. Part 2 can be found in 10.5281/zenodo.15065555
DOI: 10.15468/dl.kncy8b
title: Occurrence Download

description: A dataset containing 228508 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Switzerland, France, United Kingdom of Great Britain and Northern Ireland, Belgium, Netherlands, Germany, United States of America, Austria, Spain)",
 "TaxonKey is Buddleja davidii Franch."
 ]
}

 The dataset includes 228508 records from 1487 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020735-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0lglnr
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Wedelia hispidula (Baker) J.U.Santos",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 19 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044344-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c35ytv
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((72 25,105 25,105 40,72 40,72 25))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Cypripedium singchii Z.J.Liu & L.J.Chen, Cypripedium subtropicum S.C.Chen & K.Y.Lang)",
 "Year 1980-2022"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011249-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.