cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2m0xl5
title: CCDC 2413957: Experimental Crystal Structure Determination

description: Related Article: Shanshan Yang, Zhuyun Liu, Yunying Sha, Weiting Yan, Weilu Guo, Lei Wang, Lizhong Wang, Pengfei Ding|2025|Z.Kristallogr.-New Cryst.Struct.|240|815|doi:10.1515/ncrs-2025-0027
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m5ncv
title: CCDC 2418507: Experimental Crystal Structure Determination

description: Related Article: Zhengrui Zhou, Chenmeng Sun, Ting Zhong, Liwei Zhou, Yun Liang, Yuan Yang|2025|Org.Lett.|||doi:10.1021/acs.orglett.5c04057
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m5nj0
title: CCDC 2418512: Experimental Crystal Structure Determination

description: Related Article: Zhengrui Zhou, Chenmeng Sun, Ting Zhong, Liwei Zhou, Yun Liang, Yuan Yang|2025|Org.Lett.|||doi:10.1021/acs.orglett.5c04057
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m5yg7
title: CCDC 2418789: Experimental Crystal Structure Determination

description: Related Article: Kristina A. Myachina, Artem V. Semenov, Matvey K. Shurikov, Dmitry V. Dar’in, Sergey V. Baykov, Mekhman S. Yusubov, Natalia S. Soldatova, Pavel S. Postnikov|2025|Synthesis|57|3611|doi:10.1055/a-2705-5409
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m5yxp
title: CCDC 2418803: Experimental Crystal Structure Determination

description: Related Article: Kristina A. Myachina, Artem V. Semenov, Matvey K. Shurikov, Dmitry V. Dar’in, Sergey V. Baykov, Mekhman S. Yusubov, Natalia S. Soldatova, Pavel S. Postnikov|2025|Synthesis|57|3611|doi:10.1055/a-2705-5409
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m5z4y
title: CCDC 2418810: Experimental Crystal Structure Determination

description: Related Article: Kristina A. Myachina, Artem V. Semenov, Matvey K. Shurikov, Dmitry V. Dar’in, Sergey V. Baykov, Mekhman S. Yusubov, Natalia S. Soldatova, Pavel S. Postnikov|2025|Synthesis|57|3611|doi:10.1055/a-2705-5409
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m61c8
title: CCDC 2418879: Experimental Crystal Structure Determination

description: Related Article: Kristina A. Myachina, Artem V. Semenov, Matvey K. Shurikov, Dmitry V. Dar’in, Sergey V. Baykov, Mekhman S. Yusubov, Natalia S. Soldatova, Pavel S. Postnikov|2025|Synthesis|57|3611|doi:10.1055/a-2705-5409
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2m5z60
title: CCDC 2418812: Experimental Crystal Structure Determination

description: Related Article: Kristina A. Myachina, Artem V. Semenov, Matvey K. Shurikov, Dmitry V. Dar’in, Sergey V. Baykov, Mekhman S. Yusubov, Natalia S. Soldatova, Pavel S. Postnikov|2025|Synthesis|57|3611|doi:10.1055/a-2705-5409
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.8kv9bm
title: Occurrence Download

description: A dataset containing 27116 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Meriones meridianus, Meriones unguiculatus, Mesechinus dauuricus, Mesechinus hughi, Micromys minutus, Millardia kathleenae, Millardia meltada, Miniopterus magnater, Miniopterus medius, Miniopterus pusillus, Mogera insularis, Mops, Mops mops, Moschus berezovskii, Moschus chrysogaster, Moschus fuscus, Moschus leucogaster, Muntiacus feae, Muntiacus gongshanensis)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 27116 records from 421 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049725-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.58yqmp
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Portugal",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Acacia cyclops",
 "Year 2024-2025"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049726-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.px2jur
title: Occurrence Download

description: A dataset containing 152684 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((34 34, 34 75, -15 75, -15 34, 34 34))",
 "SpeciesKey is one of (Bombus hypnorum, Bombus sylvestris)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 152684 records from 396 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049674-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s8mfh3
title: Occurrence Download

description: A dataset containing 203893 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Elapidae, Viperidae)"
 ]
}

 The dataset includes 203893 records from 164 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049716-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e241207v1
title: italian polls

description: Polling dataset with voting preferences, area location, age, gender, employment status, education and previous vote obtained from social media after the Italian National elections of September 2022. <br>data.Rdata contains the dataset, while poptable.Rdata contains the population tables obtained from the Italian census for adjustment.
DOI: 10.15468/dl.vdrnh2
title: Occurrence Download

description: A dataset containing 8365 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((152.354533 -32.564867, 152.313838 -32.526345, 152.264336 -32.526345, 152.305018 -32.564867, 152.354533 -32.564867))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2015",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 8365 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049727-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/bmthhc
title: PAN-00175371 - pinch lead

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00175371&lt;/p&gt;
description: Modified: 2025-10-29T15:01:01+01:00
DOI: 10.15468/dl.c9cthx
title: Occurrence Download

description: A dataset containing 401804 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "DecimalLatitude is greater than or equal to -0.914722",
 "DecimalLatitude is less than or equal to 4.085278",
 "DecimalLongitude is greater than or equal to 10.0",
 "DecimalLongitude is less than or equal to 15.0",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 401804 records from 149 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049707-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jzvmf4
title: Occurrence Download

description: A dataset containing 306670 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen, Material sample)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Acaulosporaceae, Glomeraceae, Gigasporaceae, Diversisporaceae, Claroideoglomeraceae, Archaeosporaceae, Paraglomeraceae)",
 "Year 2000-2025"
 ]
}

 The dataset includes 306670 records from 190 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049718-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kz3t8m
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-139.28725 61.06901,-136.87219 60.10562,-132.74151 60.95024,-137.73 61.88723,-139.28725 61.06901))",
 "OccurrenceStatus is Present",
 "TaxonKey is Belida chaetoneura"
 ]
}

 The dataset includes 98 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049731-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/naulth
title: PAN-00112339 - coin/coin-related, Claudius (41-54), naar ?, as

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00112339&lt;/p&gt;
description: Modified: 2025-06-17T09:49:17+02:00
DOI: 10.15468/dl.9cuszx
title: Occurrence Download

description: A dataset containing 125118 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "DecimalLatitude is greater than or equal to 4.085278",
 "DecimalLatitude is less than or equal to 9.085278",
 "DecimalLongitude is greater than or equal to 10.0",
 "DecimalLongitude is less than or equal to 15.0",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 125118 records from 102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049713-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30871642
title: Metamorphosed phosphorites in the Hatrurim Basin, Israel: implications for the Mottled Zone pyro-metamorphic event

description: Metamorphosed phosphorites are exposed at the base of the Mottled Zone pyro-metamorphic complex in the Hatrurim Basin, Israel. Formed by recrystallization of unusually P-rich protoliths under extraordinary conditions, they provide insight on the effect of metamorphism on globally important natural resource and the behaviour of apatite under extreme high <i>T</i>, low <i>P</i> conditions. By studying the textures and assemblages of meta-phosphorites, measuring the chemical composition of apatite and dating it by U–Pb geochronology, the extent, characteristics and timing of combustion metamorphism around the Dead Sea basin are constrained, and an insight on the trigger of such events is provided. Our field, petrographic and geochemical analysis indicates peak metamorphic temperatures of ≥800°C (locally exceeding 1170°C) in apatite marbles immediately beneath Mottled Zone calc-silicate marbles and ≥525°C in fluorapatite phosphorites at lower stratigraphic levels. Apatite recrystallization at high temperatures involved SiO<sub>2</sub> and CO<sub>2</sub> incorporation into its lattice, and formation of an assemblage dominated by non-silicates. Sulfide formation was constrained by <i>f</i>O<sub>2</sub> and the SO<sub>3</sub> content of the protolith and spurrite formation was controlled by the P<sub>2</sub>O<sub>5</sub>/SiO<sub>2</sub> ratio. Metamorphism involved partial decarbonation, inhibited by CO<sub>2</sub> incorporation into the apatite lattice. Mobilization of V and U during low <i>T</i> alteration of apatite marble is evident, but P<sub>2</sub>O<sub>5</sub> mostly remained immobile. Thermally driven recrystallization of apatite during high <i>T</i> metamorphism resulted in isotopic homogenization of Pb and U–Pb system closure, enabling U–Pb geochronology based on spot analyses of apatite clusters. U–Pb dating of apatite records combustion events in the Hatrurim Basin in the Early Miocene (18 − 14 Ma), Late Miocene (12 − 10 Ma) and Pliocene (4.3 − 3.9 Ma), in accordance with previous age determinations. The first and last events correlate well with major tectonic events along the Dead Sea Transform. Sequential U–Pb ages of apatite in a single outcrop and textural evidence for metamorphic overprint require either partial preservation or replenishment of flammable material between combustion events.
DOI: 10.6084/m9.figshare.30871642.v1
title: Metamorphosed phosphorites in the Hatrurim Basin, Israel: implications for the Mottled Zone pyro-metamorphic event

description: Metamorphosed phosphorites are exposed at the base of the Mottled Zone pyro-metamorphic complex in the Hatrurim Basin, Israel. Formed by recrystallization of unusually P-rich protoliths under extraordinary conditions, they provide insight on the effect of metamorphism on globally important natural resource and the behaviour of apatite under extreme high <i>T</i>, low <i>P</i> conditions. By studying the textures and assemblages of meta-phosphorites, measuring the chemical composition of apatite and dating it by U–Pb geochronology, the extent, characteristics and timing of combustion metamorphism around the Dead Sea basin are constrained, and an insight on the trigger of such events is provided. Our field, petrographic and geochemical analysis indicates peak metamorphic temperatures of ≥800°C (locally exceeding 1170°C) in apatite marbles immediately beneath Mottled Zone calc-silicate marbles and ≥525°C in fluorapatite phosphorites at lower stratigraphic levels. Apatite recrystallization at high temperatures involved SiO<sub>2</sub> and CO<sub>2</sub> incorporation into its lattice, and formation of an assemblage dominated by non-silicates. Sulfide formation was constrained by <i>f</i>O<sub>2</sub> and the SO<sub>3</sub> content of the protolith and spurrite formation was controlled by the P<sub>2</sub>O<sub>5</sub>/SiO<sub>2</sub> ratio. Metamorphism involved partial decarbonation, inhibited by CO<sub>2</sub> incorporation into the apatite lattice. Mobilization of V and U during low <i>T</i> alteration of apatite marble is evident, but P<sub>2</sub>O<sub>5</sub> mostly remained immobile. Thermally driven recrystallization of apatite during high <i>T</i> metamorphism resulted in isotopic homogenization of Pb and U–Pb system closure, enabling U–Pb geochronology based on spot analyses of apatite clusters. U–Pb dating of apatite records combustion events in the Hatrurim Basin in the Early Miocene (18 − 14 Ma), Late Miocene (12 − 10 Ma) and Pliocene (4.3 − 3.9 Ma), in accordance with previous age determinations. The first and last events correlate well with major tectonic events along the Dead Sea Transform. Sequential U–Pb ages of apatite in a single outcrop and textural evidence for metamorphic overprint require either partial preservation or replenishment of flammable material between combustion events.
DOI: 10.17026/ar/vfn5qe
title: PAN-00169090 - seal with long connecting strip

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00169090&lt;/p&gt;
description: Modified: 2025-11-12T09:35:26+01:00
DOI: 10.6084/m9.figshare.30871651
title: Impact of adequacy of empirical antimicrobial therapy on hospital length of stay: a systematic review and meta-analysis

description: Infections, particularly sepsis, require rapid initiation of empirical antibiotic therapy. Delays or inadequacies in therapy can significantly increase patient morbidity, mortality and length of stay (LOS). This systematic review and meta-analysis aimed to evaluate the impact of adequate versus inadequate empirical antibiotic therapy on LOS. A comprehensive search was conducted in EMBASE, Cochrane Library, Web of Science and MEDLINE for studies published between 2012 and 2024. Studies involving adult hospitalised patients with infections, assessment of antimicrobial adequacy based on microbiological cultures and LOS data were included. Statistical analysis was performed using Review Manager 5.3, with LOS treated as a continuous variable and outcomes assessed through mean difference and 95% confidence intervals (CIs). Thirteen studies with a total of 4158 participants met the inclusion criteria. The mean LOS for patients receiving adequate therapy was significantly lower than for those receiving inadequate therapy (mean difference −1.17 days; 95% CI: −1.40, −0.94). When pooling data from all included studies and weighting by sample size, the overall mean LOS for patients receiving adequate empirical antimicrobial therapy was 12.5 days, compared to 28.5 days among those receiving inadequate therapy. Additionally, adequate therapy resulted in a reduced ICU LOS by −0.89 days (95% CI: −1.22, −0.57). Adequate antimicrobial therapy significantly reduces LOS in hospitalised patients with infections.
DOI: 10.6084/m9.figshare.30871651.v1
title: Impact of adequacy of empirical antimicrobial therapy on hospital length of stay: a systematic review and meta-analysis

description: Infections, particularly sepsis, require rapid initiation of empirical antibiotic therapy. Delays or inadequacies in therapy can significantly increase patient morbidity, mortality and length of stay (LOS). This systematic review and meta-analysis aimed to evaluate the impact of adequate versus inadequate empirical antibiotic therapy on LOS. A comprehensive search was conducted in EMBASE, Cochrane Library, Web of Science and MEDLINE for studies published between 2012 and 2024. Studies involving adult hospitalised patients with infections, assessment of antimicrobial adequacy based on microbiological cultures and LOS data were included. Statistical analysis was performed using Review Manager 5.3, with LOS treated as a continuous variable and outcomes assessed through mean difference and 95% confidence intervals (CIs). Thirteen studies with a total of 4158 participants met the inclusion criteria. The mean LOS for patients receiving adequate therapy was significantly lower than for those receiving inadequate therapy (mean difference −1.17 days; 95% CI: −1.40, −0.94). When pooling data from all included studies and weighting by sample size, the overall mean LOS for patients receiving adequate empirical antimicrobial therapy was 12.5 days, compared to 28.5 days among those receiving inadequate therapy. Additionally, adequate therapy resulted in a reduced ICU LOS by −0.89 days (95% CI: −1.22, −0.57). Adequate antimicrobial therapy significantly reduces LOS in hospitalised patients with infections.
DOI: 10.23719/1532345
title: Diatom rbcL metabarcoding data for freezing and storage duration study

description: These data include sample information and gene sequence reads for amplicon sequence variants from a study of freezing and storage duration effects on diatom-environment relationships
DOI: 10.5281/zenodo.17856294
title: 9TH9 diffraction dataset for the structure of the N-terminal domain of BC2L-C lectin in complex with (3-(2-Chloroacetamido)benzamido)-beta-L-fucopyranose

description: X-ray diffraction images collected   the 9th of july 2025 on beamline proxima 2 at SOLEIL synchrotron, Saint Aubin, France for PDB ID 9TH9 using a DECTRIS EIGER X 9M detector. X-ray raw diffraction images and xdsme processing files for the structure of the N-terminal domain of BC2L-C lectin in complex with (3-(2-Chloroacetamido)benzamido)-beta-L-fucopyranose

File name were changed from JG24 to IG17.
DOI: 10.5281/zenodo.17856293
title: 9TH9 diffraction dataset for the structure of the N-terminal domain of BC2L-C lectin in complex with (3-(2-Chloroacetamido)benzamido)-beta-L-fucopyranose

description: X-ray diffraction images collected   the 9th of july 2025 on beamline proxima 2 at SOLEIL synchrotron, Saint Aubin, France for PDB ID 9TH9 using a DECTRIS EIGER X 9M detector. X-ray raw diffraction images and xdsme processing files for the structure of the N-terminal domain of BC2L-C lectin in complex with (3-(2-Chloroacetamido)benzamido)-beta-L-fucopyranose

File name were changed from JG24 to IG17.
DOI: 10.5281/zenodo.17843231
title: Benchmarking_tissue_preparation_Stage2

description: This dataset consists of two folders: 

1) data_mesmer, which contains the .csv files of single-cell marker signal intensity data from Mesmer cell segmentation for all experiments. These files were used as input for the data preprocessing and visualization pipeline. Refer to the ‘README.md’ for more details.

2) data_cellXpress, which contains the .csv files of single-cell marker signal intensity data from cellXpress2 cell segmentation for all experiments. These files were used as input for the data preprocessing and visualization pipeline. Refer to the ‘README.md’ for more details.

Codes used can be found at https://github.com/SizunJiangLab/Benchmarking_tissue_preparation/ .