cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23513757
title: Child health Outcome codes and dataset

description: The dataset and code that supports our analysis on " <strong>The cumulative effect of PM2.5 components is larger than the effect of PM2.5 mass on child health in India" </strong>are attached herewith
DOI: 10.6084/m9.figshare.23513757.v3
title: Child health Outcome codes and dataset

description: The dataset and code that supports our analysis on " <strong>The cumulative effect of PM2.5 components is larger than the effect of PM2.5 mass on child health in India" </strong>are attached herewith
DOI: 10.21227/gaa8-h536
title: FASEN2023 - Wall segmentation of aorta in IVUS images

description: Currently, abdominal aortic aneurysms (AAAs) are treated based on the diameter of the aorta measured with ultrasound (US), however, a better patient-specific marker is needed. The mean thickness of the wall is a major indicator for AAA rupture risk, which varies significantly within and between patients. So far, regional thickness has not been used in previous rupture risk analysis studies, since it cannot be measured with CT, MRI, nor with non-invasive US. This is the first study to map locally varying wall thickness of AAAs using intravascular ultrasound (IVUS).Since no ground truth of AAA wall thickness can be obtained in vivo, a novel ex vivo dataset was created of porcine, phantom and simulated aortas, including a ground truth. The porcine aortas introduce the image features found in real aortic tissue, the phantom aortas introduce the motion by pulsation of the aorta, and the simulated aortas introduce realistic aneurysm geometries. The ground truth wall geometry for the different experimental set-ups were obtained in various ways, i.e. for porcine aortas, micro-CT was used, for phantom aortas, manual segmentation and a known wall thickness were used, and for simulated AAAs, a given wall geometry was used as input.This ex vivo dataset can be used to train a neural network, and a trained model can successfully segment the aortic wall in IVUS images in AAAs in vivo. Regionally varying wall thickness and geometry of aortas can be obtained, leading to a patient-specific marker for more advanced rupture risk assessment of AAAs.
DOI: 10.48665/udec/orvxaa/gevkaf
title: CODEBOOK.pdf

description: Codebook (Spanish and English)
DOI: 10.48665/udec/orvxaa/bl42no
title: DATA.xlsx

description: Dataset
DOI: 10.48665/udec/orvxaa
title: Increased academic stress is associated with decreased plasma BDNF in Chilean college students

description: Academic stress (AS) is a prevalent challenge faced by university students, potentially affecting molecular indicators such as brain-derived neurotrophic factor (BDNF) and global DNA methylation (G-DNA-M). These indicators could illuminate the physiological ramifications of academic stress. Study Design and Methods: This research followed a quantitative, non-experimental, longitudinal panel design spanning two academic semesters, observing phenomena in their natural context. Students from the Medical Technology program at Universidad de Concepción, Chile were involved, with assessments at the beginning and during heightened academic stress periods. Sample: Of the total participants, 63.0% were females, with an average age of 21.14 years at baseline, and 36.92% were males, averaging 21.36 years. By the study's conclusion, female participants averaged 21.95 years, and males 22.13 years. Results: Significant differences were observed between initial and final assessments for the SISCO-II Inventory of Academic Stress and Beck Depression Inventory-II, notably in stressor scores, and physical, and psychological reactions. Gender differences emerged in the final physical and psychological reactions. No significant changes were detected between the two assessments in plasma BDNF or G-DNA-M values. A refined predictive model showcased that, on average, there was a 3.56% decrease in females' plasma BDNF at the final assessment and a 17.14% decrease in males. In the sample, the G-DNA-M percentage at the final assessment increased by 15.06% from the baseline for females and 18.96% for males. Conclusions: The study underscores the physiological impact of academic stress on university students, evidenced by changes in markers like BDNF and G-DNA-M. These findings offer an in-depth understanding of the intricate mechanisms regulating academic stress responses and highlight the need for interventions tailored to mitigate its physiological and psychological effects.
DOI: 10.3886/e173141
title: Code for: Monetary Policy in Sudden Stop-prone Economies

description: This paper proposes a parsimonious theory explaining the cyclicality of monetary policy in emerging countries in a model where access to foreign financing depends on the real exchange rate and the government lacks commitment. The discretionary monetary policy is procyclical to mitigate balance sheet effects originating from exchange rate depreciations during sudden stops. Committing to an inflation targeting regime is found to increase social welfare and reduce the frequency of financial crises, despite increasing their severity. Finally, the ability to use capital controls induces a less procyclical discretionary monetary policy and delivers higher welfare gains than an inflation targeting regime.
DOI: 10.3886/e173141v1
title: Code for: Monetary Policy in Sudden Stop-prone Economies

description: This paper proposes a parsimonious theory explaining the cyclicality of monetary policy in emerging countries in a model where access to foreign financing depends on the real exchange rate and the government lacks commitment. The discretionary monetary policy is procyclical to mitigate balance sheet effects originating from exchange rate depreciations during sudden stops. Committing to an inflation targeting regime is found to increase social welfare and reduce the frequency of financial crises, despite increasing their severity. Finally, the ability to use capital controls induces a less procyclical discretionary monetary policy and delivers higher welfare gains than an inflation targeting regime.
DOI: 10.6084/m9.figshare.24201126
title: CpxR promotes the carbapenem antibiotic resistance of <i>Klebsiella pneumoniae</i> by directly regulating the expression and the dissemination of <i>bla</i><sub>KPC</sub> on the IncFII conjugative plasmid

description: <i>Klebsiella pneumoniae</i> is an important human pathogen known for its resistance to carbapenem antibiotics, especially the increasing carbapenem-resistant hypervirulent variants. The carbapenem resistance is mainly caused by the carbapenemase gene <i>bla</i><sub>KPC</sub> which was commonly found on the IncFII transferable plasmids in <i>K. pneumoniae</i> ST11 isolates in regions of China. However, the mechanisms of the plasmid-carrying <i>bla</i><sub>KPC</sub> regulation by the host strain are not clear. To investigate the chromosome-encoded two-component system (TCS) that regulates the carbapenem resistance of <i>K. pneumoniae</i> caused by <i>bla</i><sub>KPC</sub>, twenty-four TCSs of a carbapenem-resistant classical <i>K. pneumoniae</i> ST11 clinical isolate were knocked out. The deletion mutation of the TCS regulator <i>cpxR</i> exhibited increased sensitivity to carbapenem, which could be restored by complementation with <i>cpxR in trans</i>. Electrophoretic mobility shift, isothermal titration calorimetry and DNase I footprinting results revealed that CpxR directly bound to the promoter DNA of <i>bla</i><sub>KPC</sub> and the binding was abolished by disrupting the DNA-binding domain in CpxR. The subsequent <i>in vivo</i> assays using the <i>lacZ</i> reporter system and qPCR showed that CpxR upregulates the transcription of <i>bla</i><sub>KPC</sub>. Notably, CpxR was also found to activate the transfer of the <i>bla</i><sub>KPC</sub>-carrying IncFII plasmid between the hypervirulent <i>K. pneumoniae</i> and <i>E. coli</i> isolates, in which CpxR promoted the transcription of the <i>tra</i> operon via binding to its promoter region. These results provide an important insight into the regulation of the host factor CpxR in the plasmid-carrying carbapenemase gene in the classical and hypervirulent <i>K. pneumoniae</i>.
DOI: 10.6084/m9.figshare.24201126.v1
title: CpxR promotes the carbapenem antibiotic resistance of <i>Klebsiella pneumoniae</i> by directly regulating the expression and the dissemination of <i>bla</i><sub>KPC</sub> on the IncFII conjugative plasmid

description: <i>Klebsiella pneumoniae</i> is an important human pathogen known for its resistance to carbapenem antibiotics, especially the increasing carbapenem-resistant hypervirulent variants. The carbapenem resistance is mainly caused by the carbapenemase gene <i>bla</i><sub>KPC</sub> which was commonly found on the IncFII transferable plasmids in <i>K. pneumoniae</i> ST11 isolates in regions of China. However, the mechanisms of the plasmid-carrying <i>bla</i><sub>KPC</sub> regulation by the host strain are not clear. To investigate the chromosome-encoded two-component system (TCS) that regulates the carbapenem resistance of <i>K. pneumoniae</i> caused by <i>bla</i><sub>KPC</sub>, twenty-four TCSs of a carbapenem-resistant classical <i>K. pneumoniae</i> ST11 clinical isolate were knocked out. The deletion mutation of the TCS regulator <i>cpxR</i> exhibited increased sensitivity to carbapenem, which could be restored by complementation with <i>cpxR in trans</i>. Electrophoretic mobility shift, isothermal titration calorimetry and DNase I footprinting results revealed that CpxR directly bound to the promoter DNA of <i>bla</i><sub>KPC</sub> and the binding was abolished by disrupting the DNA-binding domain in CpxR. The subsequent <i>in vivo</i> assays using the <i>lacZ</i> reporter system and qPCR showed that CpxR upregulates the transcription of <i>bla</i><sub>KPC</sub>. Notably, CpxR was also found to activate the transfer of the <i>bla</i><sub>KPC</sub>-carrying IncFII plasmid between the hypervirulent <i>K. pneumoniae</i> and <i>E. coli</i> isolates, in which CpxR promoted the transcription of the <i>tra</i> operon via binding to its promoter region. These results provide an important insight into the regulation of the host factor CpxR in the plasmid-carrying carbapenemase gene in the classical and hypervirulent <i>K. pneumoniae</i>.
DOI: 10.6084/m9.figshare.24201120
title: Data set for x-y measurements

description: This data file contains the data sets from the <i>x-y</i> planar particle image velocimetry (PIV) measurements performed by Fang et al. (2023) on the flow upstream of a bar rack system with bottom overlay. The data is intended to be opened using Tecplot 360. Trial version could be accessed here: https://www.tecplot.com/
DOI: 10.6084/m9.figshare.24201120.v1
title: Data set for x-y measurements

description: This data file contains the data sets from the <i>x-y</i> planar particle image velocimetry (PIV) measurements performed by Fang et al. (2023) on the flow upstream of a bar rack system with bottom overlay. The data is intended to be opened using Tecplot 360. Trial version could be accessed here: https://www.tecplot.com/
DOI: 10.21223/nkyyiw/ixnvgh
title: 03_Data_dictionary.txt

description: :unav
DOI: 10.21223/nkyyiw/zb2z2x
title: 01_Fieldbook_PTYL200907_TASHKENT_heat.txt

description: :unav
DOI: 10.21223/nkyyiw/rwrd0b
title: PTYL200907_TASHKENT_HEAT.xls

description: :unav
DOI: 10.21223/nkyyiw/sxwkj5
title: 02_Material_list_PTYL200907_TASHKENT_heat.txt

description: :unav
DOI: 10.21223/nkyyiw
title: Dataset for: Assessment of Heat-Tolerant Potato Varieties in Uzbekistan (2009)

description: Trials featuring heat-tolerant potato varieties were conducted in South West Central Asia (SWCA), specifically in Tashkent, Uzbekistan, during the year 2009. In this study, 16 potato clones were evaluated using a randomized complete block design (RCBD) with three repetitions
DOI: 10.6084/m9.figshare.24199821.v1
title: How Does ChatGPT-3.5 Compare with Developers When Answering Questions and Revising Software?

description: This folder contains all the experiment results for our research to investigate how ChatGPT3.5 performs compared to Developers when answering technical questions and revising software based on maintenance request.
DOI: 10.21223/bf3bjw/3e71b6
title: 03_Data_dictionary.txt

description: :unav
DOI: 10.21223/bf3bjw/rkpvpc
title: 02_Material_list_PTYL201007_TASHKENT_BMZ..txt

description: :unav
DOI: 10.21223/bf3bjw/6hhnfs
title: PTYL201007_TASHKENT-BMZ.xls

description: :unav
DOI: 10.21223/bf3bjw/rx5gk1
title: 01_Fieldbook_PTYL201007_TASHKENT_BMZ.txt

description: :unav
DOI: 10.21223/bf3bjw
title: Dataset for: Assessment of Heat-Tolerant Potato Varieties in Uzbekistan (2010)

description: Trials featuring heat-tolerant potato varieties were conducted in South West Central Asia (SWCA), specifically in Tashkent, Uzbekistan, during the year 2010. In this study, 16 potato clones were evaluated using a randomized complete block design (RCBD) with three repetitions
DOI: 10.5281/zenodo.7261797
title: MicroBooNE BNB Inclusive Overlay Sample (No Wire Info)

description: MicroBooNE samples are provided for collaborative development in two different formats: HDF5, targeting the broadest audience, and artroot, targeting users that are familiar with the software infrastructure of Fermilab neutrino experiments and more in general of HEP experiments. The HDF5 files are stored on Zenodo, together with a list of artroot files accessible with xrootd. This sample includes simulated interactions of neutrinos from the Booster Neutrino Beam (BNB), overlaid on top of cosmic ray data. The sample is inclusive, i.e. it includes all types of neutrinos and interactions, with relative abundance matching our nominal flux and cross section models. Interactions are simulated in in the whole cryostat volume. The HDF5 files in this sample do not include the information at the wire waveform level ("NoWire" label), allowing for larger number of events to be included in the data set. More documentation, including detailed description of content, recipes, and example usage, at https://github.com/uboone/OpenSamples. Suggested text for acknowledgment is the following:<br> <em>We acknowledge the MicroBooNE Collaboration for making publicly available the data sets [data set DOIs] employed in this work. These data sets consist of simulated neutrino interactions from the Booster Neutrino Beamline overlaid on top of cosmic data collected with the MicroBooNE detector [2017 JINST 12 P02017].</em> In addition, we request that software products resulting from the usage of the datasets are also made publicly available.
description: This data set was prepared by the MicroBooNE collaboration using the resources of the Fermi National Accelerator Laboratory (Fermilab), a U.S. Department of Energy, Office of Science, HEP User Facility. Fermilab is managed by Fermi Research Alliance, LLC (FRA), acting under Contract No. DE-AC02-07CH11359. MicroBooNE is supported by the following: the U.S. Department of Energy, Office of Science, Offices of High Energy Physics and Nuclear Physics; the U.S. National Science Foundation; the Swiss National Science Foundation; the Science and Technology Facilities Council (STFC), part of the United Kingdom Research and Innovation; the Royal Society (United Kingdom); and the UK Research and Innovation (UKRI) Future Leaders Fellowship. Additional support for the laser calibration system and cosmic ray tagger was provided by the Albert Einstein Center for Fundamental Physics, Bern, Switzerland. We also acknowledge the contributions of technical and scientific staff to the design, construction, and operation of the MicroBooNE detector as well as the contributions of past collaborators to the development of MicroBooNE analyses, without whom this work would not have been possible. For the purpose of open access, the authors have applied a Creative Commons Attribution (CC BY) public copyright license to this submission.
DOI: 10.5281/zenodo.7261798
title: MicroBooNE BNB Inclusive Overlay Sample (No Wire Info)

description: MicroBooNE samples are provided for collaborative development in two different formats: HDF5, targeting the broadest audience, and artroot, targeting users that are familiar with the software infrastructure of Fermilab neutrino experiments and more in general of HEP experiments. The HDF5 files are stored on Zenodo, together with a list of artroot files accessible with xrootd. This sample includes simulated interactions of neutrinos from the Booster Neutrino Beam (BNB), overlaid on top of cosmic ray data. The sample is inclusive, i.e. it includes all types of neutrinos and interactions, with relative abundance matching our nominal flux and cross section models. Interactions are simulated in in the whole cryostat volume. The HDF5 files in this sample do not include the information at the wire waveform level ("NoWire" label), allowing for larger number of events to be included in the data set. More documentation, including detailed description of content, recipes, and example usage, at https://github.com/uboone/OpenSamples. Suggested text for acknowledgment is the following:<br> <em>We acknowledge the MicroBooNE Collaboration for making publicly available the data sets [data set DOIs] employed in this work. These data sets consist of simulated neutrino interactions from the Booster Neutrino Beamline overlaid on top of cosmic data collected with the MicroBooNE detector [2017 JINST 12 P02017].</em> In addition, we request that software products resulting from the usage of the datasets are also made publicly available.
description: This data set was prepared by the MicroBooNE collaboration using the resources of the Fermi National Accelerator Laboratory (Fermilab), a U.S. Department of Energy, Office of Science, HEP User Facility. Fermilab is managed by Fermi Research Alliance, LLC (FRA), acting under Contract No. DE-AC02-07CH11359. MicroBooNE is supported by the following: the U.S. Department of Energy, Office of Science, Offices of High Energy Physics and Nuclear Physics; the U.S. National Science Foundation; the Swiss National Science Foundation; the Science and Technology Facilities Council (STFC), part of the United Kingdom Research and Innovation; the Royal Society (United Kingdom); and the UK Research and Innovation (UKRI) Future Leaders Fellowship. Additional support for the laser calibration system and cosmic ray tagger was provided by the Albert Einstein Center for Fundamental Physics, Bern, Switzerland. We also acknowledge the contributions of technical and scientific staff to the design, construction, and operation of the MicroBooNE detector as well as the contributions of past collaborators to the development of MicroBooNE analyses, without whom this work would not have been possible. For the purpose of open access, the authors have applied a Creative Commons Attribution (CC BY) public copyright license to this submission.
DOI: 10.5517/ccdc.csd.cc2b5sfr
title: CCDC 2150514: Experimental Crystal Structure Determination

description: Related Article: Daniel Sebena, Kevin Rudolph, Bibhisan Roy, Christoph Wölper, Till Nitschke, Sarah Lampe, Michael Giese, Jens Voskuhl|2022|Molecules|27|3005|doi:10.3390/molecules27093005
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2b5sgs
title: CCDC 2150515: Experimental Crystal Structure Determination

description: Related Article: Daniel Sebena, Kevin Rudolph, Bibhisan Roy, Christoph Wölper, Till Nitschke, Sarah Lampe, Michael Giese, Jens Voskuhl|2022|Molecules|27|3005|doi:10.3390/molecules27093005
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bksc2
title: CCDC 2162044: Experimental Crystal Structure Determination

description: Related Article: Nataliya S. Rukk, Grigorii A. Buzanov, Galina A. Davydova, Ravshan S. Shamsiev, Lyudmila G. Kuzmina, Svetlana K.  Belus|2022|Monogr.Ser.Int.Conf.Coord.Chem.|15|27|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.21223/xb6h0a/x7xver
title: 02_Material_list_PTYL201007_TASHKENT_LTVR.txt

description: :unav
DOI: 10.21223/xb6h0a/0vqykz
title: 03_Data_dictionary.txt

description: :unav
DOI: 10.21223/xb6h0a/hrlqcw
title: PTYL201007_TASHKENT-LTVR.xls

description: :unav
DOI: 10.21223/xb6h0a/gwg5f9
title: 01_Fieldbook_PTYL201007_TASHKENT-LTVR.txt

description: :unav
DOI: 10.21223/xb6h0a
title: Dataset for: Evaluation of Lowland Tropic Virus-Resistant (LTVR) Potato Varieties in Uzbekistan (2010)

description: In this trial, 16 potato clones were assessed using a randomized complete block design (RCBD) with three repetitions during 2010 in Tashkent, Uzbekistan. These clones belong to the Lowland Tropic Virus Resistant Population (LTVR).
DOI: 10.5281/zenodo.8222128
title: High resolution sea state parameters estimated from SAR imagery at Herschel Island, Qikiqtaruk, Yukon, Canada

description: Sea state parameters such as significant wave height were estimated using the empirical CWAVE_EX algorithm.<br> The aim of the data acquisition was to overcome the lack of in-situ data on significant wave heights in the Arctic by using remote sensing data.<br> Synthetic Aperture Radar (SAR) images from the TerraSAR-X (TS-X) and TanDEM-X (TD-X) satellites were used to obtain high spatial resolution sea state information around Herschel Island, Qikiqtaruk, Yukon, Canada. All ice-free scenes were processed from the entire archive of TS-X/TD-X StripMap mode imagery with a coverage of approximately 30 km x 50 km acquired between 2009 and 2020. For each SAR scene, a sea state file was created as a tab-separated text file in the coordinate reference system EPSG: 4328 - WGS84.<br> The dataset was used to analyse wave heights in the nearshore zone according to spatial variability, seasonality and wind conditions. For more details please refer to Brembach, K., Pleskachevsky, A., Lantuit, H. (in prep): Investigating High-Resolution Spatial Wave Patterns on the Canadian Beaufort Shelf using SAR Imagery at Herschel Island, Qikiqtaruk, Yukon, Canada.