cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3864244_d3
title: Additional file 3: Table S1. of Blood as a route of transmission of uterine pathogens from the gut to the uterus in cows

description: Similarity of percentages analysis of Brayâ  Curtis dissimilarity within and between body habitats. (A) Blood on day 0 and blood on day 2, (B) feces on day 0 and feces on day 2, (C) uterus on day 0 and uterus on day 2, (D) uterus on day 0 and blood on day 0, (E) uterus on day 0 and feces on day 0, (F) uterus on day 2 and blood on day 2, and (G) uterus on day 2 and feces on day 2. (XLSX 27Â kb)
DOI: 10.6084/m9.figshare.c.3864259_d3.v1
title: Additional file 12: of 
                     Oxalobacter formigenes-associated host features and microbial community structures examined using the American Gut Project

description: Statistical details of the phylogenetic tree in Additional file 2: Figure S2A. (FASTA 424 bytes)
DOI: 10.6084/m9.figshare.c.3864244_d4.v1
title: Additional file 4: Table S2. of Blood as a route of transmission of uterine pathogens from the gut to the uterus in cows

description: Core bacterial genera and its abundance at each body habitat (A) blood, (B) feces, (C) uterus, and (D) vagina. There were 36 core genera on day 0 (E) and 33 core genera on day 2 (F) that were present in all blood, feces, and uterine samples. (XLSX 79Â kb)
DOI: 10.6084/m9.figshare.c.3864259_d3
title: Additional file 12: of 
                     Oxalobacter formigenes-associated host features and microbial community structures examined using the American Gut Project

description: Statistical details of the phylogenetic tree in Additional file 2: Figure S2A. (FASTA 424 bytes)
DOI: 10.6084/m9.figshare.c.3864259_d4.v1
title: Additional file 13: of 
                     Oxalobacter formigenes-associated host features and microbial community structures examined using the American Gut Project

description: R script for multivariate analysis. (R 33 kb)
DOI: 10.6084/m9.figshare.c.3864283_d1
title: Additional file 1: Table S1. of The role of Lutheran/basal cell adhesion molecule in human bladder carcinogenesis

description: C-DNA Microarray screening of H-rasV12 up-regulated genes in the bladder cancer cells E6RC compared to parental E6 cells. Figure S1. Lu/BCAM expression in human breast cancer cell lines and knockdown experiments. Figure S2. Correlation between Lu expression level and disease-specific survival. Figure S3. The construct of pCDNA3.1-Lu and expression of exogenic Lu in the NIH3T3 stable cell lines. Figure S4. The effect of Lu expression on cell proliferation in the presence or absence of laminin. Figure S5. The effect of Lu and laminin together on the expression levels of JNK, JNK-P, p38 and p38-P in NIH-Lu11 cells. Figure S6. The effect of exogenic Lu expression on Ras protein expression in T24 cells. Figure S7. Tumor formation of NIH-Lu and NIH3T3 cells with or without laminin in a xenograft NOD/SCID mouse model. (DOCM 1085Â kb)
DOI: 10.6084/m9.figshare.c.3864244_d9.v1
title: Additional file 9: Table S5. of Blood as a route of transmission of uterine pathogens from the gut to the uterus in cows

description: Metadata. (XLSX 17Â kb)
DOI: 10.6084/m9.figshare.c.3864244_d9
title: Additional file 9: Table S5. of Blood as a route of transmission of uterine pathogens from the gut to the uterus in cows

description: Metadata. (XLSX 17Â kb)
DOI: 10.15468/dl.xmw36y
title: Occurrence Download

description: A dataset containing 2083 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chelidonichthys cuculus (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 2083 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039319-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3866356_d1.v1
title: Additional file 1: of The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata

description: qPCR data of gDNA used to calculate the sequence dose by Ct method of relative quantification (Nguyen et al. 2013). Gene dosage ratios (GDR) of the target genes were compared with autosomal gene Hsp70. (XLSX 90 kb)
DOI: 10.6084/m9.figshare.c.3866356_d1
title: Additional file 1: of The satellite DNA AflaSAT-1 in the A and B chromosomes of the grasshopper Abracris flavolineata

description: qPCR data of gDNA used to calculate the sequence dose by Ct method of relative quantification (Nguyen et al. 2013). Gene dosage ratios (GDR) of the target genes were compared with autosomal gene Hsp70. (XLSX 90 kb)
DOI: 10.6084/m9.figshare.c.3866341_d2.v1
title: Additional file 2: Table S2. of Expression profiling of genes regulated by sphingosine kinase1 signaling in a murine model of hyperoxia induced neonatal bronchopulmonary dysplasia

description: Top fifty enriched pathways are listed here by cluster. The process of clustering is explained in the materials and methods. (XLSX 20Â kb)
DOI: 10.6084/m9.figshare.c.3866341_d2
title: Additional file 2: Table S2. of Expression profiling of genes regulated by sphingosine kinase1 signaling in a murine model of hyperoxia induced neonatal bronchopulmonary dysplasia

description: Top fifty enriched pathways are listed here by cluster. The process of clustering is explained in the materials and methods. (XLSX 20Â kb)
DOI: 10.5281/zenodo.14515016
title: Spectroscopic characterization of XX century mural paintings of Punta Begoña's galleries under conservation works
DOI: 10.5281/zenodo.14515017
title: Spectroscopic characterization of XX century mural paintings of Punta Begoña's galleries under conservation works
DOI: 10.6084/m9.figshare.c.3866341_d3.v1
title: Additional file 3: Table S3. of Expression profiling of genes regulated by sphingosine kinase1 signaling in a murine model of hyperoxia induced neonatal bronchopulmonary dysplasia

description: Comparison of the 10 most highly differentiated genes between WT HO and Sphk1 â  /â   HO groups. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3866341_d3
title: Additional file 3: Table S3. of Expression profiling of genes regulated by sphingosine kinase1 signaling in a murine model of hyperoxia induced neonatal bronchopulmonary dysplasia

description: Comparison of the 10 most highly differentiated genes between WT HO and Sphk1 â  /â   HO groups. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3866341_d6.v1
title: Additional file 6: Table S6. of Expression profiling of genes regulated by sphingosine kinase1 signaling in a murine model of hyperoxia induced neonatal bronchopulmonary dysplasia

description: Comparison of 10 most highly differentiated genes between WT RA and WT HO groups. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.c.3866389_d2.v1
title: Additional file 2: Table S1. of A widespread family of polymorphic toxins encoded by temperate phages

description: General characteristics of bacteriophages, results of the prediction of lifestyle, and of the detection of MuF. Table S2. General characteristics of bacterial genomes, prophages and information on whether they encode a MuF protein. Table S3. General characteristics of the HMM protein profiles. Table S4. General characteristics of the 614 MuF proteins from bacteriophages. Table S5. General characteristics of the 901 MuF proteins identified in bacterial genomes. Table S6. Information on the bacterial prophages where muf genes could be identified. Table S7. General characteristics of toxin domains. Table S8. List of the MuF proteins identified in the integrated reference catalog of the human gut microbiome [41]. (XLSX 1074 kb)
DOI: 10.6084/m9.figshare.c.3866341_d6
title: Additional file 6: Table S6. of Expression profiling of genes regulated by sphingosine kinase1 signaling in a murine model of hyperoxia induced neonatal bronchopulmonary dysplasia

description: Comparison of 10 most highly differentiated genes between WT RA and WT HO groups. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.c.3866389_d2
title: Additional file 2: Table S1. of A widespread family of polymorphic toxins encoded by temperate phages

description: General characteristics of bacteriophages, results of the prediction of lifestyle, and of the detection of MuF. Table S2. General characteristics of bacterial genomes, prophages and information on whether they encode a MuF protein. Table S3. General characteristics of the HMM protein profiles. Table S4. General characteristics of the 614 MuF proteins from bacteriophages. Table S5. General characteristics of the 901 MuF proteins identified in bacterial genomes. Table S6. Information on the bacterial prophages where muf genes could be identified. Table S7. General characteristics of toxin domains. Table S8. List of the MuF proteins identified in the integrated reference catalog of the human gut microbiome [41]. (XLSX 1074 kb)
DOI: 10.15468/dl.ez4jsh
title: Occurrence Download

description: A dataset containing 27231 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Acris crepitans Baird, 1854)"
 ]
}

 The dataset includes 27231 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039320-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3866404_d1.v1
title: Additional file 1: of The oncogenic role of the In1-ghrelin splicing variant in prostate cancer aggressiveness

description: Figure S1. Ghrelin receptor expression in PCa. A. GHSR1a or GHSR1b mRNA expression in biopsies from patients with high-risk PCa (n = 20) and normal prostate samples from patients that underwent cystoprostatectomies (n = 7). Expression levels were determined by qPCR and adjusted by a normalization factor (NF) calculated from ACTB and GAPDH expression levels. Data were evaluated by Mann-Whitney test and represent median (IQR); B. GHSR1a or GHSR1b mRNA expression in PCa cell lines (androgen-dependent: VCaP, 22Rv1 and castration resistant: PC-3, DU145). Absolute mRNA levels from different passages (n ≥ 3) were determined by qPCR and adjusted by ACTB [Data are expressed as percent of DU145 (GHSR1a) and VCaP (GHSR1b) set at 100%, since they are the cell lines with lesser expression of those receptors, and, in order to ease the comparison between the cell lines); C. Further analysis of GHSR1a expression on different PCa cell lines (22Rv1, DU145, LNCaP, PC-3), normal-like prostate cell line (EPN) and PCa samples using several pairs of primers. As positive control, cDNA from a pituitary tumor with GHSR1a expression was used. Figure S2. Secretion of testosterone and modulation of androgen receptor (AR) system after treatment with ghrelin gene-derived peptides in LNCaP cells. A. Testosterone levels in the culture medium after 24 h of treatment with native-ghrelin or In1-ghrelin peptides (10 nM); B. AR mRNA expression after 24 h of treatment with ghrelin or In1-ghrelin derived peptides (10 nM); C. phospho-AR (Ser81) time-course activation after treatment with native-ghrelin or In1-ghrelin peptides (10–30 min). Protein levels of phospho-AR (Ser81) were adjusted by total AR. Representative blots in LNCaP cell line are showed; D. PSA secretion and mRNA expression after 24 h of treatment with native-ghrelin or In1-ghrelin peptides (10 nM). Absolute mRNA levels were determined by qPCR and adjusted by ACTB. Values represent mean ± SEM of n &gt; 3 experiments. Figure S3. Representative figures showing the validation of In1-ghrelin and ghrelin overexpression in PC3 cells by qPCR. Absolute mRNA levels were determined by qPCR and adjusted by ACTB. Values represent mean ± SEM of n &gt; 3 experiments. Asterisk indicate significant difference (***p  3 experiments. Table S1. List of primers used in the studies. Table S2. Prostate cancer finder RT2 Profiler PCR array data. (ZIP 2150 kb)
DOI: 10.6084/m9.figshare.c.3866389_d8.v1
title: Additional file 8: of A widespread family of polymorphic toxins encoded by temperate phages

description: HMMER3 hidden Markov model for MuF4. (HMM 107 kb)
DOI: 10.15468/dl.9d32yx
title: Occurrence Download

description: A dataset containing 1159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chelidonichthys lastoviza (Bonnaterre, 1788)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 1159 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039321-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3866389_d8
title: Additional file 8: of A widespread family of polymorphic toxins encoded by temperate phages

description: HMMER3 hidden Markov model for MuF4. (HMM 107 kb)
DOI: 10.6084/m9.figshare.c.3866389_d9.v1
title: Additional file 9: of A widespread family of polymorphic toxins encoded by temperate phages

description: HMMER3 hidden Markov model for C-terminal MuF associated domain Ct_MAD. (HMM 114 kb)
DOI: 10.6084/m9.figshare.c.3866389_d9
title: Additional file 9: of A widespread family of polymorphic toxins encoded by temperate phages

description: HMMER3 hidden Markov model for C-terminal MuF associated domain Ct_MAD. (HMM 114 kb)
DOI: 10.6084/m9.figshare.c.3866425_d1
title: Additional file 1: Table S1. of Density-dependent sex ratio and sex-specific preference for host traits in parasitic bat flies

description: Data for all collected host and parasite individuals (location, date, host and parasite traits are included). (XLSX 18 kb)
DOI: 10.6084/m9.figshare.c.3866425_d1.v1
title: Additional file 1: Table S1. of Density-dependent sex ratio and sex-specific preference for host traits in parasitic bat flies

description: Data for all collected host and parasite individuals (location, date, host and parasite traits are included). (XLSX 18 kb)
DOI: 10.6084/m9.figshare.c.3866464_d1.v1
title: Additional file 1: Table S1. of Distinct preoperative clinical features predict four histopathological subtypes of high-grade serous carcinoma of the ovary, fallopian tube, and peritoneum

description: Clinical findings of individual cases. Individual findings include pathological subtype, stage, suggestive origin (location of primary tumor), morphology of the primary tumor, amount of ascites, presence of omental cake, presence and pattern of peritoneal disease, radiographically enlarged lymph nodes, and presence of distant metastasis. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3866464_d1
title: Additional file 1: Table S1. of Distinct preoperative clinical features predict four histopathological subtypes of high-grade serous carcinoma of the ovary, fallopian tube, and peritoneum

description: Clinical findings of individual cases. Individual findings include pathological subtype, stage, suggestive origin (location of primary tumor), morphology of the primary tumor, amount of ascites, presence of omental cake, presence and pattern of peritoneal disease, radiographically enlarged lymph nodes, and presence of distant metastasis. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3866461_d5.v1
title: MOESM5 of In silico prediction of novel therapeutic targets using gene–disease association data

description: Additional file 5: Table S1. Prediction results of neural network classifier. The first three columns contain gene identifiers, the fourth column is the prediction (0: non-target, 1: target), the fifth and sixth columns contain the predicted probabilities of being a target or not, respectively.
DOI: 10.6084/m9.figshare.c.3866461_d5
title: MOESM5 of In silico prediction of novel therapeutic targets using geneâ  disease association data

description: Additional file 5: Table S1. Prediction results of neural network classifier. The first three columns contain gene identifiers, the fourth column is the prediction (0: non-target, 1: target), the fifth and sixth columns contain the predicted probabilities of being a target or not, respectively.
DOI: 10.15468/dl.fp4t86
title: Occurrence Download

description: A dataset containing 3386 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chelidonichthys lucerna (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 3386 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039322-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3866461_d6.v1
title: MOESM6 of In silico prediction of novel therapeutic targets using gene–disease association data

description: Additional file 6: Table S2. Literature text mining results. The first two columns contain gene identifiers, the third column contains the PubMed ID of the publication where the gene is mentioned as a therapeutic target.
DOI: 10.17632/hkbgh5s3b7.1
title: MH-SoyaHealthVision: An Indian UAV and Leaf Image Dataset for Integrated Crop Health Assessment

description: MH-SoyaHealthVision is a comprehensive dataset developed for integrated crop health assessment in soybean farming. It combines ground-level leaf images and UAV-captured images from soyabean fields of Maharashtra region, enabling a holistic approach towards disease and pest attack detection. The leaf image dataset includes high-resolution visuals of soybean leaves affected by diseases such as rust, mosaic virus, septoria brown spot, and frog-eye leaf spot, along with pest damage caused by caterpillars and semiloopers. Complementing this, the UAV dataset provides large-scale aerial perspectives of soybean fields, capturing patterns of rust, mosaic virus, and pest attack infestations.
The inclusion of UAV technology in this dataset is crucial for precision agriculture, as drones facilitate highly accurate, targeted spraying of pesticides. The combined approaches of ground-level and aerial imagery make MH-SoyaHealthVision a valuable resource for developing machine learning and deep learning models for disease detection and classification. This dataset aims to contribute towards improved crop health monitoring, enabling early intervention strategies and enhancing productivity in soybean farming.
The dataset comprises a total of 5,680 images, divided into two parts:
First part includes Soybean Leaf Image Dataset, categorized into six folders out of which one is"Healthy," next four representing different types of diseases, and last is of pest attack.
Second part includes Soybean UAV Image Dataset, categorized into four folders out of which one is "Healthy," two folders representing diseases, and remaining one for pest attack.
DOI: 10.17632/2xnhcyn7g6.1
title: FLIPPO_LO*TZ

description: Resultant data reported in Feudal Independent Leader Proximal Policy Optimization by Austin Starken and Sean Mondesire. The paper answers the research question, "To what extent does a feudal hierarchy enhance independent PPO agents’ performance, scalability, and generalizability in a high-dimensional environment with sparse and delayed rewards compared to non-hierarchical methods?" The data files contain performance data for the approaches studied in the paper. Performance data was collected at 5 million training steps, 9 million training steps, and a final collection when training was complete. The total required training steps for each approach was collected in COMBINED_TS.xlsx
DOI: 10.6084/m9.figshare.c.3866461_d6
title: MOESM6 of In silico prediction of novel therapeutic targets using geneâ  disease association data

description: Additional file 6: Table S2. Literature text mining results. The first two columns contain gene identifiers, the third column contains the PubMed ID of the publication where the gene is mentioned as a therapeutic target.
DOI: 10.17632/cnxkrry929.1
title: Replication Data for: COVID-19’s Impacts on the Tourism and Hospitality Industry: Recommendations for Future Research

description: This dataset includes replication data for the paper: "Sann, R., Lai, P. C., & Liaw, S. Y. (2024). COVID-19’s Impacts on the Tourism and Hospitality Industry: Recommendations for Future Research. Journal of Quality Assurance in Hospitality & Tourism, 1–39. https://doi.org/10.1080/1528008X.2024.2434489"
DOI: 10.15468/dl.yh5dwk
title: Occurrence Download

description: A dataset containing 10036 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Acris gryllus (LeConte, 1825))"
 ]
}

 The dataset includes 10036 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039323-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/8dp2mmf6t9.1
title: Optimal planning of power distribution networks with fault-tolerant configuration - Dataset

description: The dataset contains five test networks. For each test network, there is a certain number of nodes located in the city center, with a higher spatial density, and there are other nodes located in the suburbs, with a lower spatial density. The load demand of each SS is calculated using two different Gaussian probability distributions, one associated with SSs located in the city center and the other with SSs located in the suburbs. The edges connecting each pair of nodes have a cost proportional to the Euclidean distance between the nodes, to which a random component uniformly distributed in a range of values proportional to the Euclidean distance is added. In each network, a natural obstacle that may be present in a real case, such as a river, is simulated using a piecewise linear function. Whenever an edge crosses the obstacle, an additional cost is added to the connection, much greater than that associated with the Euclidean distance. A weighted graph is thus obtained (the weights are the costs of edges) and the total cost of an arc connecting two nodes s and t is defined as the cost of the shortest path starting from source node s and ending at target node t. Lastly, for a random number of node triplets in the network, the triangle inequality is intentionally violated, so that the sum of the costs of two connections is less than the cost of the third connection.
DOI: 10.6084/m9.figshare.c.3866515_d1
title: Additional file 10:  of 
                     De novo assembly and characterization of breast cancer transcriptomes identifies large numbers of novel fusion-gene transcripts of potential functional significance

description: Distribution of fusion reads relative to total reads for pro-neoplastic fusion-protein transcripts in breast cancer samples. File contains fusion specific read counts, as well as, the read counts for wild-type 5′- and 3′- partner reference genes for nominated pro-neoplastic transcripts (in-frame fusion gene transcripts present in both normal and cancer samples) in breast cancer. Expression levels are presented as normalized RNA-Seq read counts as estimated using RSEM and upper quartile normalization. Column J contains relative fusion read frequency as percentage value. The first sheet in the excel file contains the data columns and a key describing the data is on the second excel sheet. (XLSX 12 kb)