cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28664648.v2
title: Status of Household Transmission Prevention among Individuals with Chronic Hepatitis B: a Cross-sectional Study in Ethiopian Tertiary Care Setting -Raw Data

description: This dataset includes de-identified responses from a cross-sectional study conducted in an Ethiopian tertiary care setting. It contains demographic characteristics, household exposure risk factors, preventive measures taken by individuals with chronic hepatitis B, and knowledge of transmission pathways. Independent variables were; the participant’s demographic details and clinical data that might influence the dependent variables. These includes; Age, sex, marital status, occupation, level of education, region, disease duration, duration of follow up at Tikur Anbessa Specialized Hospital, treatment status and if anybody else in the household is infected. Dependent variables were; the level of knowledge of transmission and prevention of HBV and the level of practices towards household transmission prevention of HBV. The overall knowledge of respondents was assessed using fourteen questions regarding HBV transmission and prevention. Each of the 14 knowledge questionnaires had three possible responses: yes, no, or don’t know. The responses were scored by assigning a value of 1 to correct answers and a value of 0 to wrong answers and don’t know. A total knowledge score was presented on a scale of 100, and to categorize knowledge score, the total score was dichotomized as high ( ≥75 out of 100 (≥11 out of 14)) and low to intermediate if &lt;11(75%) using a top quartile score as the cut of point as defined by previous studies. The practice of individual respondents regarding household transmission prevention of HBV was assessed by seven ‘yes’ or ‘no’ questions. Each correct response was given a score of “1” while an incorrect answer was given a score of “0”. The total score was categorized using a top quartile score, as good for a score between 6 and 7 points and fair to poor if &lt;6(75%). Data were collected using a structured interviewer guided questionnaires and analyzed using descriptive and inferential statistical methods in SPSS 26.De-identification Measures:Personal identifiers (e.g., names, addresses, dates of birth) have been removed following the Safe Harbor method. Geographic data is limited to regional classifications only. No identifiable images or biometric data are included.<br>
DOI: 10.6084/m9.figshare.22132448.v1
title: Supplementary Material for: Interim Evaluation of Germany’s Sugar Reduction Strategy for Soft Drinks: Commitments versus Actual Trends in Sugar Content and Sugar Sales from Soft Drinks

description: Introduction: A high intake of sugar, in particular from sugar-sweetened soft drinks, increases the risk for obesity, type 2 diabetes mellitus and dental caries. Germany has pursued a national strategy for sugar reduction in soft drinks based on voluntary commitments by industry since 2015, but its effects are unclear. Methods: We use aggregated annual sales data from Euromonitor International to assess trends in mean sales-weighted sugar content of soft drinks and per capita sugar sales from soft drinks in Germany from 2015-2021. We compare these trends to the reduction path set by Germany’s national sugar reduction strategy, and to data for the United Kingdom, which adopted a soft drinks tax in 2017 and which we selected as best practice comparison country based on pre-defined criteria. Results: Between 2015-2021, the mean sales-weighted sugar content of soft drinks sold in Germany decreased by 2% from 5.3 to 5.2 g/100ml, falling short of an interim 9% reduction target and a 29% reduction observed in the United Kingdom over the same period. Sugar sales from soft drinks in Germany decreased from 22.4 to 21.6 g/capita/day (-4%) between 2015-2021, but remain high from a public health perspective. Conclusions: Reductions observed under Germany’s sugar reduction strategy fall short of stated targets and trends observed internationally under best practice conditions. Additional policy measures may be needed to support sugar reduction in soft drinks in Germany.
DOI: 10.6084/m9.figshare.6859715.v1
title: Supplementary Material for: Gastroesophageal Reflux Disease-Related Disorders of Systemic Sclerosis Based on the Analysis of 66 Patients

description: <b><i>Background/Aims:</i></b> Gastroesophageal reflux disease (GERD)-related disorders of systemic sclerosis (SSc) patients have not been adequately investigated. <b><i>Methods:</i></b> Sixty-six SSc patients (5 males and 61 females; 56.6 ± 14.6 years old) who underwent esophagogastroduodenoscopy were analyzed on the basis of 16 background factors. They were additionally compared with 116 matched non-SSc subjects controlling age, sex, and use of proton pump inhibitors (PPIs). <b><i>Results:</i></b> The mean disease duration of 66 patients was 5.1 ± 8.1 years, and their breakdown was as follows: 53 (80.3%) with GERD, 38 (57.6%) with GERD-related symptoms, and 20 (30.3%) with reflux esophagitis (RE; LA-A: 10, LA-B: 5, LA-C: 4, LA-D: 1). Use of PPI (<i>p</i> = 0.0455), complication of interstitial lung disease (<i>p</i> = 0.0242), and history of cyclophosphamide therapy (<i>p</i> = 0.0184) denoted significant association with GERD-related symptoms. Older age (<i>p</i> = 0.0211) was significantly associated with RE. None of GERD-related disorders showed any difference between 37 diffuse cutaneous SSc and 29 limited cutaneous SSc patients. The matched analysis indicated that SSc patients had higher prevalence of GERD (<i>p </i>&lt; 0.0001), GERD-related symptoms (<i>p</i> = 0.0034), and RE (<i>p </i>= 0.0002). <b><i>Conclusion:</i></b> SSc patients tend to have worse GERD symptoms and severer RE. However, most SSc-associated factors did not show significant association with GERD-related disorders, indicating the difficulty in predicting GERD-related disorders among SSc patients.
DOI: 10.6084/m9.figshare.4758076.v1
title: Musa Data

description: - Failure reports collected by Musa. <br>- Simulated data of the proyect named as 1 using the Yule and Polya processes<br>
DOI: 10.6084/m9.figshare.3523595.v1
title: Appendix B. Mixed-model ANOVA table for effects of grass competition, root herbivory by beetles, and full sibling family of milkweed on percent of leaves with damage and leaf miner abundance at the end of the second growing season.

description: Mixed-model ANOVA table for effects of grass competition, root herbivory by beetles, and full sibling family of milkweed on percent of leaves with damage and leaf miner abundance at the end of the second growing season.
DOI: 10.6084/m9.figshare.24902079.v2
title: <b>The Genome of </b><b><i>Eleocharis vivipara</i></b><b> Elucidates the Genetics of C</b><sub><strong>3</strong></sub><b>-C</b><sub><strong>4</strong></sub><b> </b><b>Photosynthetic Plasticity</b><b> and Karyotype Evolution in the Cyperaceae</b>

description: <i>Eleocharis vivipara</i>, an amphibious sedge in the Cyperaceae family, has several remarkable properties, most notably its alternate use of C<sub>3</sub> photosynthesis underwater and C<sub>4</sub> photosynthesis on land. However, the absence of genomic data has hindered its utility for evolutionary and genetic research. Here, we present a high-quality genome for <i>E. vivipara</i>, representing the first chromosome-level genome for the <i>Eleocharis</i> genus, with an approximate size of 965.22 Mb mainly distributed across 10 chromosomes. Its Hi-C pattern, chromosome clustering results, and one-to-one genome synteny across two subgroups indicates a tetraploid structure with chromosome count 2<i>n</i> = 4<i>x</i> = 20. Phylogenetic analysis suggests that <i>E. vivipara </i>diverged from <i>Cyperus</i> <i>esculentus</i> approximately 32.96 million years ago (Mya), and underwent a whole genome duplication (WGD) about 3.5 Mya. Numerous fusion and fission events were identified between the chromosomes of<i> E. vivipara</i> and its close relatives. We demonstrate that <i>E. vivipara</i> has holocentromeres, a chromosomal feature which can maintain the stability of such chromosomal rearrangements. Experimental transplantation and cross-section studies showed its terrestrial culms developed C<sub>4</sub> Kranz anatomy with increased number of chloroplasts in the bundle sheath (BS) cells. Gene expression and weighted gene co-expression network analysis (WGCNA) showed overall elevated expression of core genes associated with C<sub>4</sub> pathway, and significant enrichment of genes related to modified culm anatomy and photosynthesis efficiency. We found evidence of mixed NAD-ME and PCK type C<sub>4</sub> photosynthesis in <i>E. vivipara</i>, and hypothesize that the evolution of C<sub>4</sub> photosynthesis predates the WGD event. The mixed type is dominated by subgenome A and supplemented by subgenome B. Collectively, our findings not only shed light on the evolution of <i>E. vivipara</i> and karyotype within the Cyperaceae family, but also provide valuable insights into the transition between C<sub>3</sub> and C<sub>4</sub> photosynthesis, offering promising avenues for crop improvement and breeding.
DOI: 10.6084/m9.figshare.23058920.v2
title: Mechanical and microstructural data for the manuscript "Microstructural controls on the uniaxial compressive strength of porous rocks through the granular to non-granular transition"

description: This file provides the data upon which the manuscript "Microstructural controls on the uniaxial compressive strength of porous rocks through the granular to non-granular transition" is based. This file contains: - text files (.txt) with mechanical data from deformation experiments performed under uniaxial conditions, where the name of the file gives the sample name and the experimental conditions; - scanning electron microscopes (SEM) images (.tif) of the features observed in deformed samples, where the name of the file gives the name of the sample and the parameters used on the SEM are given on the picture itselft; - a word document (.docx) giving the details of the mechanical results obtained for each uniaxial experiment.
DOI: 10.6084/m9.figshare.11626008.v2
title: GitterCom.zip

description: MSR 2020 data paper extension replication package
DOI: 10.6084/m9.figshare.28156310.v1
title: Dataset_From Social Media to Sustainability: The Role of Informational Social Influence in Green Consumer Decisions Online

description: This data covers responses aimed at investigating the mechanisms through which exposure to green content on social media drives green purchase intentions.
DOI: 10.6084/m9.figshare.28832192.v1
title: Taeniamia zosterophora Beagle Files

description: Beagle files for analysis of adaptation and changes in genetic diversity in ANGSD over the last century in Taeniamia zosterophora caught in the Philippines.
DOI: 10.6084/m9.figshare.17082593.v1
title: Data encoding lock

description: This project contains the following additional data
DOI: 10.15482/usda.adc/1255156
title: Onthophagus taurus Genome Assembly 1.0

description: The Baylor College of Medicine recently sequenced and annotated the Onthophagus taurus genome as part of the i5k pilot project. This dataset presents the Onthophagus taurus genome v1.0. This assembly version is the pre-release version, prior to filtering and quality control by the National Center for Biotechnology Information's GenBank resource: http://www.ncbi.nlm.nih.gov/assembly/GCA_000648695.1/. Assembly method details will be available in a forthcoming publication. The dung beetle genus Onthophagus comprises with over 2,400 extant species the most speciose genus within the animal kingdom. O. taurus itself is the most studied dung beetle and a focal taxon for studies in evolutionary ecology, evolutionary genetics, behavioral ecology, evo-devo and developmental genetics. Like many species within the genus it features extreme secondary sexual traits (horns) and extreme sexual dimorphism (cued by sex-specific development). At the same time this species possesses an equally remarkable (and representative) male dimorphism (cued entirely by larval nutrition) in which large males express huge horns which they use as weapons in male combat, whereas small males remain hornless, non-aggressive, and instead invest into enlarged testes and ejaculates. Onthophagus beetles are emerging as a model system in evodevo and ecodevo, in particular with respect to the evolutionary developmental genetics of plasticity, pattern formation, trait integration, and growth regulation. Extensive transcriptomic data already exist for this as well as other species, alongside a growing number of functional studies using larval RNAi-mediated transcript depletion, which works easily and routinely across diverse species within the genus. If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use: https://www.hgsc.bcm.edu/bcm-hgsc-conditions-use
DOI: 10.6084/m9.figshare.16573454.v1
title: Supplementary Material for: The Screening Test for Aphasia and Dysarthria (STAD) for patients with neurological communicative disorders: a large-scale, multicenter validation study in Japan

description: Medicine
DOI: 10.6084/m9.figshare.27934998.v1
title: Coded Data.xlsx

description: This dataset includes data collected on the variables like Socioeconomic Status, Loss Aversion, Career Entrenchment, Career Identity, Rejection Sensitivity. The data was collected using purposive sampling among the age group 20-24, particularly pursuing a master's in vocational or professional courses. Students pursuing general Master's courses, those with full-time work experience post-Bachelor's, or those enrolled in distance learning programs are excluded
DOI: 10.6084/m9.figshare.14806212.v1
title: mSystems00602-21-Table_S6.xlsx

description: mSystems00602-21-Table_S6:Distribution of diverse functional genes in tested DPANN genomes in this study.<br>
DOI: 10.6084/m9.figshare.28504238.v1
title: The 10,455 assembled metagenomic genomes (MAGs) of the gut microbiota from wild birds.

description: A total of 718 publicly available wild bird gut metagenome samples were collected from multiple databases. These samples were subsequently assembled and binned, resulting in 10,455 assembled metagenomic genomes (MAGs) of the wild bird gut microbiota.
DOI: 10.6084/m9.figshare.9901307.v1
title: Immunohistochemical Expression of p53 in Type I and II Epithelial Ovarian Cancer among Sudanese women

description: hosbital based cross sectional study conducted in six govermental hosbitals in sudanese women affected with ovarian cancer
DOI: 10.6084/m9.figshare.28842998.v2
title: Table S1 - cluster markers..xlsx

description: single cell RNA sequencing data of mouse ovary with and without gonadotropin stimulation
DOI: 10.6084/m9.figshare.23057276.v1
title: tree_all.nwk

description: Phylogenetic tree for "The predictive power of phylogeny on growth rates in soil bacterial communities" by J. Walkup et al. 2023.
DOI: 10.6084/m9.figshare.28681528.v1
title: 14C from Stable isotope analyses (δ15N, δ34S, δ13C) locate early rye cultivation in northern Europe within diverse manuring practices

description: Dating results
DOI: 10.6084/m9.figshare.24756030.v1
title: The Role of Digital Inclusive Finance in Green Innovation

description: 该数据集包含"数字普惠金融作为绿色创新驱动力"研究中使用的原始数据。该数据集重点分析了中国A股上市公司绿色创新活动与数字金融包容性（DFI）之间的交互作用。总共有两个文件，一个是数据文件，一个是代码文件。
DOI: 10.6084/m9.figshare.14700381.v1
title: Data from: Physical activity and sedentary behavior in medical students of a Peruvian public university

description: Dataset from an analytical cross-sectional study designed to figure the levels of Physical activity and sedentarism, as well as factors related, in medical students from a public university in Lima, capital of Peru. The study included students from the first to the sixth academic year. We used the international physical activity questionnaire (IPAQ) to assess levels of physical activity (low, middle, and high), and sedentary behavior (sitting time &gt;=8 hour/ day).
DOI: 10.23641/asha.15032241.v1
title: Swallowing physiology in Parkinson disease (Gandhi et al., 2021)

description: <b>Purpose: </b>Dysphagia is thought to be prevalent and a leading cause of morbidity and mortality in people with Parkinson disease (PwPD). The aim of this study was to compare the frequencies of atypical and extreme values for measures of swallowing physiology in PwPD and in an age- and sex-matched cohort of healthy adults. Atypical and extreme values were defined, respectively, as values falling in the 25% and 5% tails of the reference distribution for healthy adults under age 60 years.<b>Method: </b>A standard videofluoroscopy (VF) protocol was performed in 17 adults with mild PD and 17 age- and sex-matched healthy adults using 20% w/v liquid barium ranging from thin to extremely thick consistency. Blinded VF analysis was performed according to the Analysis of Swallowing Physiology: Events, Kinematics and Timing Method. Frequencies for atypical and extreme values were tabulated by cohort and compared using odds ratios.<b>Results:</b> Increased frequencies of atypical values (&gt; 25%) were seen in the PwPD for prolonged swallow reaction time, prolonged time-to-laryngeal-vestibule-closure (LVC), and poor pharyngeal constriction. However, these findings were also observed in the healthy controls. The PwPD showed significantly higher odds of atypical values for narrow upper esophageal sphincter (UES) diameter on thin liquids, a short hyoid-burst-to-UES-opening interval on extremely thick liquids, and prolonged time-to-LVC, LVC duration, and UES opening duration on multiple consistencies. The frequencies of extreme values failed to show any significant cohort differences for any parameter.<b>Conclusions:</b> In this study, a group of people with mild PD did not show clear evidence of swallowing impairments distinct from the changes seen in a healthy age-matched control group when odds ratios were used to compare the frequencies of atypical values between PwPD and the control group; only a few parameters showed significant differences. These were findings of significantly higher frequencies in PwPD of prolonged LVC and UES opening duration.<br><b>Supplemental Material S1. </b>This supplement contains descriptive statistics for measures of swallowing based on duplicated blinded review of videofluoroscopies, performed according to the ASPEKT Method. <br>Gandhi, P., Mancopes, R., Sutton, D., Plowman, E. K., & Steele, C. M. (2021). The frequency of atypical and extreme values for pharyngeal phase swallowing measures in mild Parkinson disease compared to healthy aging. Journal of Speech, Language, and Hearing Research. Advance online publication. https://doi.org/10.1044/2021_JSLHR-21-00084
DOI: 10.6084/m9.figshare.14265650.v1
title: circRNA_circFL_table.xlsx

description: Information of circRNAs detected by circFL-seq with seven cell lines and two human tissues<br>
DOI: 10.6084/m9.figshare.4985555.v1
title: Morphological characterization of coral reefs by combining LiDAR and MBES data: a case study from Yuanzhi Island, South China Sea

description: The data supplemented here include four datasets and 1 table. The format of the datasets is “Info ASCII Grid”. The format of the table is “Excel”. Table S1. Information about sampling stations (horizontal positions in the dataset 1, coral abundance level, computed SR index values). Data Set S1. The merged bathymetry of Yuanzhi Island. Data Set S 2. The bathymetry of the small area. Data Set S 3. SR index results (without depth calibration). Data Set S 4. SR index results (with depth calibration).
DOI: 10.6084/m9.figshare.26166454.v1
title: Kidney cell line ATAC data

description: Output of Cell ranger pipeline for cell line ATAC data
DOI: 10.6084/m9.figshare.26997217.v1
title: figure data of <i>Peptostreptococcus Anaerobius</i> Enhances Dextran Sulfate Sodium-Induced Colitis by Promoting NF-κB-NLRP3-Dependent Macrophage Pyroptosis

description: figure data of <i>Peptostreptococcus Anaerobius</i> Enhances Dextran Sulfate Sodium-Induced Colitis by Promoting NF-κB-NLRP3-Dependent Macrophage Pyroptosis
DOI: 10.6084/m9.figshare.825677.v1
title: Tracking free-ranging sharks with hand-fed intra-gastric acoustic transmitters

description: To estimate tag retention time, 39 acoustic transmitters were hand-fed to bull sharks <i>Carcharhinus leucas</i>, lemon sharks <i>Negaprion acutidens</i> and tiger sharks <i>Galeocerdo cuvier</i>, in the Shark Reef Marine Reserve, Fiji. Minimum tag retention times ranged from less than 24 h to 34 days, and bull sharks could be tracked for a minimum mean duration of 6.8 days. Feeding acoustic transmitters wrapped in bait to free-ranging sharks is an alternative and viable method to obtain presence–absence data from free-ranging sharks.
DOI: 10.6084/m9.figshare.22709845.v1
title: data

description: MOCVD and BEOL related data
DOI: 10.6084/m9.figshare.26128669.v1
title: Questionary: Real Customization or Just Marketing: Are Customized Versions of Generative AI Useful?

description: Recently, OpenAI introduced the ability to fine-tune their model using natural language, allowing for the development of specialized versions of GPT tailored specifically to address particular tasks. This study evaluates the effectiveness of these customized GPTs. By creating a Business Statistics Virtual Professor (BSVP) designed specifically for students at the Universidad Pontificia Comillas, we then assessed its performance and compared it to that of ChatGPT-4 Turbo.<br>
DOI: 10.6084/m9.figshare.27986195.v1
title: <b>MULTICRITERIA MAPPING OF LANDSLIDE RISK: INTEGRATING FUZZY LOGIC AND SOCIO-SPATIAL VULNERABILITY ANALYSIS</b>

description: These data refer to the database of the manuscript entitled MULTICRITERIA MAPPING OF LANDSLIDE RISK: INTEGRATING FUZZY LOGIC AND SOCIO-SPATIAL VULNERABILITY ANALYSIS which aims to Thus, the aim of this research was to produce a landslide susceptibility map for a Brazilian municipality, using Fuzzy Logic. The variables considered were: Slope, Geomorphology, Lithology, Precipitation, Proximity to roads, Land Use and Occupation, Landslide scars, and location of the residences.
DOI: 10.6084/m9.figshare.19499192.v1
title: patches and local annotations, slide 081, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.17087273.v2
title: Normal Fault Database_Lathrop.xlsx

description: Global database of normal fault length and displacement with other geological factors such as host rock lithology, tectonic setting, and fault maturity (tab 1). Fault length and displacement through time for available fault is also shown (tab 2). Sources used are listed in the database.
DOI: 10.6084/m9.figshare.27980007.v1
title: Supplementary Material from The Origin and Evolution of Shrews (Soricidae, Mammalia)

description: yuan-asher_suppdata.zip