cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ke9mfc
title: Occurrence Download

description: A dataset containing 171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Philippines",
 "OccurrenceStatus is Present",
 "TaxonKey is Rusa marianna (Desmarest, 1822)"
 ]
}

 The dataset includes 171 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010586-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wbbmw2
title: Occurrence Download

description: A dataset containing 98936 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Puerto Rico",
 "DatasetKey is one of (iNaturalist Research-grade Observations, The New York Botanical Garden Herbarium (NY), Global soil organisms, International Barcode of Life project (iBOL), Museum of Comparative Zoology, Harvard University)",
 "Geometry POLYGON((-67.17131 17.70175,-65.57953 17.70175,-65.57953 18.81881,-67.17131 18.81881,-67.43946 18.32191,-67.17131 17.70175))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 98936 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010580-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5r6jt
title: Occurrence Download

description: A dataset containing 520 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Philippine Eagle Occurrence Records"
 ]
}

 The dataset includes 520 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010587-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/28144
title: Chandra X-ray Observatory ObsId 28144

description: Multiple AGN Activity in Nearby Galaxies with Triples and Quads at &lt;2 kpc
DOI: 10.15468/dl.md5v35
title: Occurrence Download

description: A dataset containing 3376 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bougainvillea spectabilis Willd."
 ]
}

 The dataset includes 3376 records from 400 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010589-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.83r5cw
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bostrychus expatria (Herre, 1927)"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010590-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jbt796
title: Occurrence Download

description: A dataset containing 337648 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Nigerian Bird Atlas Project (Adhoc Records)"
 ]
}

 The dataset includes 337648 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010585-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jj3emh
title: Occurrence Download

description: A dataset containing 508 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Geometry POLYGON((-106.5033 31.75508,-106.47002 31.75508,-106.47059 31.77539,-106.50637 31.77482,-106.5033 31.75508))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Insecta",
 "Year 2006-2020"
 ]
}

 The dataset includes 508 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010591-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2mrx5j
title: Occurrence Download

description: A dataset listing the 5454 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Puerto Rico",
 "DatasetKey is one of (iNaturalist Research-grade Observations, The New York Botanical Garden Herbarium (NY), Global soil organisms, International Barcode of Life project (iBOL), Museum of Comparative Zoology, Harvard University)",
 "Geometry POLYGON((-67.17131 17.70175,-65.57953 17.70175,-65.57953 18.81881,-67.17131 18.81881,-67.43946 18.32191,-67.17131 17.70175))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Plantae"
 ]
}

 The dataset's 5454 records were derived from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010588-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3cns58
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Bibimys Massoia, 1979"
 ]
}

 The dataset includes 16 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010592-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ekexfn
title: Occurrence Download

description: A dataset containing 680 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Glycine soja Siebold & Zucc."
 ]
}

 The dataset includes 680 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010593-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rzw5hn
title: Occurrence Download

description: A dataset containing 36969 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON(((149.04994465216552 -34.72710369900637,149.04643881563425 -34.702796616255675,149.03726223846442 -34.67952063707186,149.0227715152412 -34.65816889188499,149.00352595379496 -34.63956007489324,148.98026571767554 -34.62440726253909,148.9538833019439 -34.613290820632365,148.9253894485608 -34.606636394671156,148.89587477774162 -34.60469878556525,148.86646853810782 -34.60755229607461,148.83829596177117 -34.61508789873503,148.81243575119007 -34.62701733081677,148.78987922290284 -34.64288397299227,148.77149258866902 -34.662080123023934,148.75798376623078 -34.683870041198176,148.74987497878163 -34.70741792781476,148.74748222364158 -34.731819802232934,148.75090246709874 -34.756138095137786,148.7600091563894 -34.779437647864846,148.77445633666142 -34.80082174119674,148.7936913292187 -34.81946675628669,148.81697557975423 -34.8346541058784,148.84341293743373 -34.84579816614367,148.87198429594605 -34.8524690868688,148.9015872355077 -34.85440955590244,148.93107906915614 -34.85154483506802,148.95932153366292 -34.84398565853721,148.98522528666612 -34.83202387801868,149.0077923828031 -34.816121037659535,149.0261550016803 -34.79689035056121,149.03960888187973 -34.775072814355546,149.04764016472882 -34.751508433266814,149.04994465216552 -34.72710369900637)))"
 ]
}

 The dataset includes 36969 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010594-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tgbh9v
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Venezuela (Bolivarian Republic of)",
 "DatasetKey is University of Michigan Museum of Zoology, Division of Birds",
 "GadmGid is VEN.8_1",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 36 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010595-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.desnnr
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON(((111.21329498960355 -0.872577622185269,111.21021219432072 -0.841087942564441,111.20108591071865 -0.810808687529934,111.18626694952479 -0.782903405162465,111.16632483533566 -0.758444409728817,111.14202592070211 -0.738371584411073,111.11430394336857 -0.723456269219752,111.08422415494994 -0.714271621581953,111.05294239670887 -0.711170589716834,111.02166069340274 -0.714272347044127,110.99158107129416 -0.723457710565747,110.96385937555323 -0.738373720066482,110.93956086238701 -0.758447201804724,110.9196192722944 -0.78290679418572,110.90480095586989 -0.810812587448413,110.89567542834996 -0.841092237327372,110.89259348171106 -0.872582165053957,110.8956736934604 -0.904072262029999,110.904797850413 -0.934352383956688,110.91961546560213 -0.962258850779813,110.93955721935156 -0.986719167912698,110.96385681399109 -1.006793250957427,110.99158040825827 -1.021709568424472,111.02166250437708 -1.030894810296355,111.0529469097552 -1.033995937884423,111.08423119662564 -1.030893763195099,111.11431294539483 -1.021707532767531,111.14203598712548 -1.006790338798487,111.16633486069902 -0.986715535356882,111.18627577075486 -0.962254685255716,111.20109247023458 -0.934347889731066,111.21021569006935 -0.904067645630676,111.21329498960355 -0.872577622185269)))"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010599-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mchy8g
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Agropyron mongolicum Keng"
 ]
}

 The dataset includes 34 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010600-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wvmn37
title: Occurrence Download

description: A dataset containing 289 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Podocarpus nubigenus Lindl."
 ]
}

 The dataset includes 289 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010603-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zjxeux
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON(((35.70834719347232 -9.513841708714626,35.70656006378758 -9.49716469765775,35.70153053962192 -9.481154076773665,35.69345221721369 -9.466424885153172,35.68263568664295 -9.453542892255193,35.66949657507414 -9.44300289611936,35.65453958237289 -9.435209746190171,35.63833912107936 -9.430462814434296,35.6215172992 -9.42894450729607,35.604720083276035 -9.430713257693576,35.58859254730068 -9.435701266295014,35.57375414788338 -9.443717080952698,35.560774966269456 -9.454452919052766,35.55015382322532 -9.467496456517775,35.542299104375864 -9.482346636081363,35.53751303348478 -9.498432892754868,35.535980002699 -9.51513706209465,35.5377594163046 -9.531817132154258,35.54278333341343 -9.547831927090277,35.550859011410054 -9.562565772353373,35.56167626280657 -9.575452190011736,35.5748193507063 -9.585995708395906,35.5897829698887 -9.593790941828725,35.6059916989926 -9.598538201145956,35.62282217130787 -9.600055030033,35.63962710333588 -9.59828322062228,35.65576024637114 -9.593291037954915,35.67060129017947 -9.585270569645315,35.68357975093546 -9.574530306785684,35.69419691762375 -9.561483247082812,35.702045009988986 -9.546630984029584,35.7068228130903 -9.53054439980404,35.70834719347232 -9.513841708714626)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010601-250415084134356/datasets/export for details.
DOI: 10.5281/zenodo.15264243
title: Litter Data - Eucalyptus Clone

description: This dataset compiles information on the production, decomposition, and chemical composition of litterfall in a clonal Eucalyptus spp. plantation, along with associated climatic variables recorded during the study period. The data were collected through a field experiment aimed at understanding nutrient cycling processes and litter dynamics under specific environmental conditions.
DOI: 10.5281/zenodo.15264244
title: Litter Data - Eucalyptus Clone

description: This dataset compiles information on the production, decomposition, and chemical composition of litterfall in a clonal Eucalyptus spp. plantation, along with associated climatic variables recorded during the study period. The data were collected through a field experiment aimed at understanding nutrient cycling processes and litter dynamics under specific environmental conditions.
DOI: 10.5281/zenodo.15264371
title: Litter Data - Eucalyptus Clone

description: This dataset compiles information on the production, decomposition, and chemical composition of litterfall in a clonal Eucalyptus spp. plantation, along with associated climatic variables recorded during the study period. The data were collected through a field experiment aimed at understanding nutrient cycling processes and litter dynamics under specific environmental conditions.
DOI: 10.15468/dl.2tnrnv
title: Occurrence Download

description: A dataset containing 1387 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anthracoceros marchei Oustalet, 1885"
 ]
}

 The dataset includes 1387 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010604-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cmqhw8
title: Occurrence Download

description: A dataset containing 1387 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Anthracoceros marchei Oustalet, 1885"
 ]
}

 The dataset includes 1387 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010605-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2x5rk3
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tragulus nigricans Thomas, 1892"
 ]
}

 The dataset includes 35 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010607-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13785028
title: Dataset for "Global Sensitivity Analysis of Nitric Oxide-Related Chemical Reaction Rates in the Global Ionosphere Thermosphere Model"

description: This repository contains all the datasets and scripts used to generate the figures in the paper tilted "Global Sensitivity Analysis of Nitric Oxide-Related Chemical Reaction Rates in the Global Ionosphere Thermosphere Model". The data and scripts are organized according to the figure numbers to facilitate ease of use and reproducibility.

Directory StructureEach figure has its own dedicated folder. Inside each folder, you will find:

Data files: These files contain the dataset used to generate the corresponding figure.Scripts: Python or other relevant scripts needed to process the data and create the figure.README.txt: Each figure folder includes a separate README.txt file that provides detailed instructions on how to run the scripts.How to UseNavigate to a Figure's Folder: Locate the folder corresponding to the figure number you are interested in (e.g., Fig_01, Fig_02, etc.).

Read the README.txt: Open the README.txt file in that folder. It contains specific instructions on how to execute the code and generate the figure, along with any necessary setup details.

Run the Scripts: Follow the instructions in the README.txt file to run the script(s) and generate the figure.
DOI: 10.5281/zenodo.14934479
title: Dataset and scripts for the paper titled "Effects of Proton Precipitation in Global Ionosphere Thermosphere Model During 17 March 2013 Geomagnetic Storms"

description: The repository contains the dataset and scripts for the paper titled "Effects of Proton Precipitation in Global Ionosphere Thermosphere Model During 17 March 2013 Geomagnetic Storms" by Atishnal Chand, Aaron J. Ridley, George Bowden, and Melrose Brown.

This repository contains data and scripts to generate all figures in the paper.

How to UseFind the Figure

Each figure has its own folder (e.g., Fig_01/, Fig_02/).Run the Script

Open the scripts/ folder inside the figure’s directory.Run the script using:bashCopyEditpython script_name.py.Check Data
DOI: 10.15468/dl.gannd7
title: Occurrence Download

description: A dataset containing 193824 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year is greater than or equal to 1975",
 "Year is less than or equal to 1979",
 "HasCoordinate is true",
 "BasisOfRecord is Human Observation",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 193824 records from 307 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010597-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/jpc-gbs-knt
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ml0-dfa-yjf
title: Bivalvia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7jh-j93-wd2
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mv6-kbd-fce
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/njv-h05-8jp
title: Amphibia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9wk-tqa-6nx
title: Stylocidaris reini (Döderlein, 1887)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b8d-mlq-1p9
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fcb-hmb-dxv
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rh5-x5p-420
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/czl-ww7-w8c
title: Pseudopus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/eaj-s39-4ql
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k4z-1ax-efk
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9qe-mfh-a1p
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k0a-t4p-8rz
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.29940062
title: codes for the manuscript: Song, D., Ruff, D., Cohen, M., & Huang, C. (2024). Neuronal heterogeneity of normalization strength in a circuit model. bioRxiv.

description: Neurons in higher-order visual areas integrate information through a canonical computation called normalization. The strength of normalization is highly heterogeneous across neurons, and this heterogeneity correlates with attention-mediated modulations in neural responses. However, the circuit mechanism underlying the heterogeneous normalization strength is unclear. In this work, we study normalization in a spiking neuron network model of visual cortex. Our model reveals that the heterogeneity of normalization strength is highly correlated with the inhibitory current each neuron receives. The correlation between inhibition and other synaptic inputs explains the experimentally observed dependence of spike count correlations on normalization strength. Further, we find that neurons with stronger normalization encode information more efficiently, and that networks with more heterogeneity in normalization have more information and higher capacity in encoding visual stimuli. Together, our model provides a mechanistic explanation of heterogeneous normalization strengths in the visual cortex, and sheds light on the computational benefits of neuronal heterogeneity.
DOI: 10.6084/m9.figshare.29940062.v1
title: codes for the manuscript: Song, D., Ruff, D., Cohen, M., & Huang, C. (2024). Neuronal heterogeneity of normalization strength in a circuit model. bioRxiv.

description: Neurons in higher-order visual areas integrate information through a canonical computation called normalization. The strength of normalization is highly heterogeneous across neurons, and this heterogeneity correlates with attention-mediated modulations in neural responses. However, the circuit mechanism underlying the heterogeneous normalization strength is unclear. In this work, we study normalization in a spiking neuron network model of visual cortex. Our model reveals that the heterogeneity of normalization strength is highly correlated with the inhibitory current each neuron receives. The correlation between inhibition and other synaptic inputs explains the experimentally observed dependence of spike count correlations on normalization strength. Further, we find that neurons with stronger normalization encode information more efficiently, and that networks with more heterogeneity in normalization have more information and higher capacity in encoding visual stimuli. Together, our model provides a mechanistic explanation of heterogeneous normalization strengths in the visual cortex, and sheds light on the computational benefits of neuronal heterogeneity.
DOI: 10.3535/wch-vh5-80b
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xte-gh4-h0z
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/slw-ajz-fjn
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x7q-0y4-e7e
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.