cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.12633934
title: Data from: Geomorphological signatures of known hurricanes and validation of theoretical emplacement formulations: coastal boulder deposits on Cuban low-lying marine terraces

description: Here we show the models made from SfM photogrammetry for 5 boulders found on the Cuban island emplaced by three hurricanes on the low marine terrace. To generate a 3D-scaled SfM point cloud of each studied boulder, we adapted an easy SfM workflow using Agisoft Metashape software (version 1.7.2). We surveyed each CBD obtaining pictures between 0.5 m - 3 m distance from the boulder and also climbing on the boulder to maximise the diversity of picture angles. The survey was carried over a time lapse of ~30 minutes and under cloudy conditions to avoid shadows created by direct sunlight. For scaling SfM results and assessing the quality of measurements, we used six wooden balls as photogrammetric targets. The diameter of the balls is 30 ± 0.2 x 10-3 m, as verified by repeated caliper measurements. We complemented these targets with two 70 x 10 cm wooden scales. All these targets were used as reference scale bars to correct the spherical distortion inherent to the camera optics and perform an auto-calibration. We further used these targets to check possible distortion after post processing and the generation of the resulting 3D model. In order to create a point cloud and a solid volume, we followed the software workflow: we first aligned the images to identify tiepoints, which were then used in bundle adjustment to compute the 3D dense clouds in a second step.
DOI: 10.15468/dl.93fsp3
title: Occurrence Download

description: A dataset containing 313 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sphyraena japonica Bloch & Schneider, 1801",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 313 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011916-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hf82gg
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.44_1",
 "TaxonKey is Prunus virginiana L."
 ]
}

 The dataset includes 23 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011918-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12656790
title: Spirituality, anxiety, and depression in health professionals

description: The relationship among spirituality, anxiety, and depression in health professionals in a Greek regional general hospital.
DOI: 10.5281/zenodo.12656791
title: Spirituality, anxiety, and depression in health professionals

description: The relationship among spirituality, anxiety, and depression in health professionals in a Greek regional general hospital.
DOI: 10.15468/dl.tdzyzv
title: Occurrence Download

description: A dataset containing 4187 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Argiope argentata (Fabricius, 1775)"
 ]
}

 The dataset includes 4187 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011919-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q2sjd8
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heterololigo bleekeri (W.Keferstein, 1866)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 59 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011920-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2qfztj
title: Occurrence Download

description: A dataset containing 82823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Institut Botanic de Barcelona (IBB, CSIC-Ajuntament de Barcelona), BC-Plantae",
 "Geometry POLYGON((-2.47343 44.80099,-9.00469 44.74644,-10.31094 42.74845,-11.46351 38.25234,-10.31094 35.42412,-3.70284 35.42412,-0.78298 36.29594,4.90306 37.88939,5.21041 40.0399,4.13467 43.42186,-2.47343 44.80099))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 82823 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011917-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26180272
title: Untitled Item

description: This project contains CT images and 3D models of <i>Achoania</i> for Liu et al., 2024 manuscript 'Psarolepid neurocranial anatomy casts new insights into early osteichthyan evolution'.
DOI: 10.6084/m9.figshare.26180272.v1
title: Untitled Item

description: This project contains CT images and 3D models of <i>Achoania</i> for Liu et al., 2024 manuscript 'Psarolepid neurocranial anatomy casts new insights into early osteichthyan evolution'.
DOI: 10.15468/dl.kg9k8y
title: Occurrence Download

description: A dataset containing 382 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helicolenus hilgendorfii (Döderlein, 1884)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 382 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011921-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vr2jfg
title: Occurrence Download

description: A dataset containing 209 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Metapenaeus ensis (De Haan, 1844)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 209 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011922-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.htagy6
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prionace glauca (Linnaeus, 1758)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 18 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011923-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12656200
title: Manual de boas-vindas aos estagiários de enfermagem em um novo setor

description: A partir da perspectiva das acadêmicas e dos profissionais que recebem o estudante no setor, foi possível elaborar o presente manual com o objetivo de instruir a equipe para o recebimento e adequação dos novos estagiários.
DOI: 10.5281/zenodo.12656201
title: Manual de boas-vindas aos estagiários de enfermagem em um novo setor

description: A partir da perspectiva das acadêmicas e dos profissionais que recebem o estudante no setor, foi possível elaborar o presente manual com o objetivo de instruir a equipe para o recebimento e adequação dos novos estagiários.
DOI: 10.15468/dl.edb84n
title: Occurrence Download

description: A dataset containing 300 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hoplobrotula armata (Temminck & Schlegel, 1846)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 300 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011924-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q9t2jd
title: Occurrence Download

description: A dataset containing 1971 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Freshwater biodiversity of the Eastern Highlands of Zimbabwe: Assessing conservation priorities using primary species-occurrence data"
 ]
}

 The dataset includes 1971 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011925-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q329v8
title: Occurrence Download

description: A dataset containing 102 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Saurida wanieso Shindo & Yamada, 1972",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 102 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011926-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f5dc8m
title: Occurrence Download

description: A dataset containing 8344 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is July",
 "OccurrenceStatus is Present",
 "Year 2024-2024"
 ]
}

 The dataset includes 8344 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011927-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t5awhc
title: Occurrence Download

description: A dataset containing 219 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "OccurrenceStatus is Present",
 "TaxonKey is Genetta G.Cuvier, 1816"
 ]
}

 The dataset includes 219 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011928-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12609739
title: Molecular Modelling project
DOI: 10.5281/zenodo.12609740
title: Molecular Modelling project
DOI: 10.5281/zenodo.12627181
title: Molecular Modelling project
DOI: 10.5281/zenodo.12656104
title: Molecular Modelling project
DOI: 10.5281/zenodo.12657048
title: Molecular Modelling project
DOI: 10.15468/dl.ruwng9
title: Occurrence Download

description: A dataset containing 145 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Acacesia Simon, 1895"
 ]
}

 The dataset includes 145 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011929-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7uvb4j
title: Occurrence Download

description: A dataset containing 3329 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hyaena hyaena (Linnaeus, 1758)"
 ]
}

 The dataset includes 3329 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011931-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qzzur5
title: Occurrence Download

description: A dataset containing 6407 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Andorra, Albania, Armenia, Austria, Azerbaijan, Bosnia and Herzegovina, Belgium, Bulgaria, Belarus, Switzerland, Cyprus, Czechia, Germany, Denmark, Algeria, Estonia, Egypt, Greece, Spain, Finland, Faroe Islands, France, Georgia, Guernsey, Gibraltar, Croatia, Hungary, Ireland, Israel, Isle of Man, Iceland, Italy, Jersey, Lebanon, Liechtenstein, Lithuania, Luxembourg, Latvia, Libya, Morocco, Monaco, Moldova, Republic of, Montenegro, North Macedonia, Malta, Netherlands, Norway, Poland, Palestine, State of, Portugal, Romania, Serbia, Russian Federation, Sweden, Slovenia, Svalbard and Jan Mayen, Slovakia, San Marino, Syrian Arab Republic, Tunisia, Türkiye, Ukraine, United Kingdom of Great Britain and Northern Ireland, French Guiana, Guadeloupe, Martinique, Mayotte, Réunion, Saint Martin (French part), Holy See)",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Machine Observation, Occurrence evidence, Observation)",
 "ScientificName is one of (Asclepias syriaca, Asclepias syriaca L.)"
 ]
}

 The dataset includes 6407 records from 148 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011932-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3qxmcd
title: Occurrence Download

description: A dataset containing 44315 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is A Bird Atlas of Kenya"
 ]
}

 The dataset includes 44315 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011934-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.csed3p
title: Occurrence Download

description: A dataset containing 44315 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is A Bird Atlas of Kenya"
 ]
}

 The dataset includes 44315 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011933-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5mqy2n
title: Occurrence Download

description: A dataset containing 2228 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "StateProvince is Guaviare",
 "TaxonKey is Plantae",
 "Year 2017-2024"
 ]
}

 The dataset includes 2228 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011935-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12526906
title: Datasets used for TSS-Captur

description: Three processed datasets that can be used as an input for the pipeline TSS-Captur, containing a MasterTable computed using TSSpredator, the corresponding FASTA file and the annotation file (in form of a GFF file). A short description of the datasets follows:



scoelicolor.zip: Contains the input data used for the report presented in the manuscript for TSS-Captur. The study uses the data by Jeong, et al. (2016), where Streptomyces coelicolor analyzed under different conditions. For more information, refer to the original study. 

cjejuni.zip: A further dataset for usage in TSS-Captur. Contains the data of a study comparing the transcriptome of four different strains of Campylobacter jejuni (Dugar, et al., 2013) using TSSpredator to compute a genome-wide TSS map.

bacteroides_plasmid.zip: A small dataset based on the study by Ryan, et al. (2020), where the transcriptome of Bacteroides thetaiotaomicron was analyzed. The MasterTable was produced using TSSpredator and very sensitive parameters. 


 

References: 

Dugar, G., Herbig, A., Förstner, K. U., Heidrich, N., Reinhardt, R., Nieselt, K., & Sharma, C. M. (2013). High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates. PLoS genetics, 9(5), e1003495.

Jeong, Y., Kim, J. N., Kim, M. W., Bucca, G., Cho, S., Yoon, Y. J., ... & Cho, B. K. (2016). The dynamic transcriptional and translational landscape of the model antibiotic producer Streptomyces coelicolor A3 (2). Nature communications, 7(1), 11605.

Ryan, D., Jenniches, L., Reichardt, S., Barquist, L., & Westermann, A. J. (2020). A high-resolution transcriptome map identifies small RNA regulation of metabolism in the gut microbe Bacteroides thetaiotaomicron. Nature communications, 11(1), 3557.
DOI: 10.5281/zenodo.12526907
title: Datasets used for TSS-Captur

description: Three processed datasets that can be used as an input for the pipeline TSS-Captur, containing a MasterTable computed using TSSpredator, the corresponding FASTA file and the annotation file (in form of a GFF file). A short description of the datasets follows:



scoelicolor.zip: Contains the input data used for the report presented in the manuscript for TSS-Captur. The study uses the data by Jeong, et al. (2016), where Streptomyces coelicolor analyzed under different conditions. For more information, refer to the original study. 

cjejuni.zip: A further dataset for usage in TSS-Captur. Contains the data of a study comparing the transcriptome of four different strains of Campylobacter jejuni (Dugar, et al., 2013) using TSSpredator to compute a genome-wide TSS map.

bacteroides_plasmid.zip: A small dataset based on the study by Ryan, et al. (2020), where the transcriptome of Bacteroides thetaiotaomicron was analyzed. The MasterTable was produced using TSSpredator and very sensitive parameters. 


 

References: 

Dugar, G., Herbig, A., Förstner, K. U., Heidrich, N., Reinhardt, R., Nieselt, K., & Sharma, C. M. (2013). High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates. PLoS genetics, 9(5), e1003495.

Jeong, Y., Kim, J. N., Kim, M. W., Bucca, G., Cho, S., Yoon, Y. J., ... & Cho, B. K. (2016). The dynamic transcriptional and translational landscape of the model antibiotic producer Streptomyces coelicolor A3 (2). Nature communications, 7(1), 11605.

Ryan, D., Jenniches, L., Reichardt, S., Barquist, L., & Westermann, A. J. (2020). A high-resolution transcriptome map identifies small RNA regulation of metabolism in the gut microbe Bacteroides thetaiotaomicron. Nature communications, 11(1), 3557.
DOI: 10.34740/kaggle/dsv/8858679
title: Forex Exchange Rates Since 2004 (Updated Daily)
DOI: 10.15468/dl.uam2nt
title: Occurrence Download

description: A dataset containing 17530113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Portugal",
 "Geometry POLYGON((-9.78323 36.89742,-5.96937 36.89742,-5.96937 42.24968,-9.78323 42.24968,-9.78323 36.89742))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 17530113 records from 960 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011930-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25892732
title: Developing key performance indicators for strategic environmental assessment effectiveness: a systematic framework

description: Key performance indicators (KPIs) are critical quantifiable metrics used to evaluate performance or effectiveness. In the context of Strategic Environmental Assessment (SEA), they provide the framework by which the effectiveness of SEA practice can be examined and compared. A wide range of KPIs of SEA effectiveness have been developed, but to date they have not been systematically linked to the full range of dimensions of SEA effectiveness. The development of a concise framework of 10 SEA effectiveness KPIs for Ireland addresses this methodological gap. It has been developed through a bottom-up compilation of existing SEA effectiveness KPIs from the international literature, and then sieving these by: A) ensuring they tackle current practice weaknesses for SEA in Ireland; B) aligning them with strategic/tactical/operational success factors for effective SEA; C) prioritising them on the basis of feedback from SEA experts; and D) further refining them through project steering committee opinion. The proposed KPIs are unlikely to be pertinent for all jurisdictions, but the process used to develop them can be applied elsewhere.
DOI: 10.6084/m9.figshare.25892732.v1
title: Developing key performance indicators for strategic environmental assessment effectiveness: a systematic framework

description: Key performance indicators (KPIs) are critical quantifiable metrics used to evaluate performance or effectiveness. In the context of Strategic Environmental Assessment (SEA), they provide the framework by which the effectiveness of SEA practice can be examined and compared. A wide range of KPIs of SEA effectiveness have been developed, but to date they have not been systematically linked to the full range of dimensions of SEA effectiveness. The development of a concise framework of 10 SEA effectiveness KPIs for Ireland addresses this methodological gap. It has been developed through a bottom-up compilation of existing SEA effectiveness KPIs from the international literature, and then sieving these by: A) ensuring they tackle current practice weaknesses for SEA in Ireland; B) aligning them with strategic/tactical/operational success factors for effective SEA; C) prioritising them on the basis of feedback from SEA experts; and D) further refining them through project steering committee opinion. The proposed KPIs are unlikely to be pertinent for all jurisdictions, but the process used to develop them can be applied elsewhere.
DOI: 10.6084/m9.figshare.26125390
title: Tiering biodiversity issues from strategic environmental assessment to environmental impact assessment: exploring documentary evidence from Brazil and England

description: Biodiversity protection is one of the key goals for Environmental Assessment (EA) practice that can most efficiently be achieved through tiering of environmental objectives between Strategic Environmental Assessment (SEA) of sectoral and land use plans and Environmental Impact Assessment (EIA) of projects. This research uses an analytical framework to benchmark some examples of tiering of biodiversity objectives using documentary case studies from Brazil and the United Kingdom; these suggest that EA tiering might still be very limited despite all recommendations to improve it, thereby impacting on the efficiency with which biodiversity goals can be achieved.
DOI: 10.6084/m9.figshare.26125390.v1
title: Tiering biodiversity issues from strategic environmental assessment to environmental impact assessment: exploring documentary evidence from Brazil and England

description: Biodiversity protection is one of the key goals for Environmental Assessment (EA) practice that can most efficiently be achieved through tiering of environmental objectives between Strategic Environmental Assessment (SEA) of sectoral and land use plans and Environmental Impact Assessment (EIA) of projects. This research uses an analytical framework to benchmark some examples of tiering of biodiversity objectives using documentary case studies from Brazil and the United Kingdom; these suggest that EA tiering might still be very limited despite all recommendations to improve it, thereby impacting on the efficiency with which biodiversity goals can be achieved.