cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.16919654
title: Daily Water Levels of the Vistula River at Warsaw, 1799–2024: A Complete and Homogenized Long-Term Record

description: The dataset Vistula River Warsaw Daily Water Levels provides a continuous daily record of water stages of the Vistula River at Warsaw, comprising 82,453 observations from 1 February 1799 to 31 October 2024. Data are stored in a two-dimensional tabular format with one row per day and variables provided in columns.

The table contains the following fields:





date – calendar date in the format YYYY-MM-DD.




water_level_cm – daily water stage in centimetres relative to the reference gauge zero, homogenized and referred to the currently operating gauge Warsaw–Boulevards.




water_level_m_Kronstadt60 – water level converted to metres above sea level according to the Kronstadt 60 vertical reference system (m a.s.l.).




water_level_m_EVRF2007 – water level converted to metres above sea level according to the EVRF2007 vertical reference system (m a.s.l.).




data_type – classification of the record as observed (measured values) or reconstructed (gap-filled values).




original_observation – unadjusted water level observations recorded in the original measurement units, without any corrections or conversions.Units used over time: 

1799-02-01 – 1859-12-31: New Polish cal (≈ 2.4 cm)

1860-01-01 – 1879-12-01: English Imperial inch (≈ 2.54 cm)

1880-01-01 – 1910-10-31: Russian 1/100 sazhen (≈ 2.13 cm)

from 1910-11-01: centimetres (cm)




reconstruction_method – method applied in the case of reconstructed data, e.g. linear interpolation or gauge relationship.




remarks – additional information, notes on reconstructions quality.



 

Data sources:

The complete bibliography is provided in the file vistula_data_sources. The file includes titles, publishers, years of publication, and, where available, links to digital copies in online libraries.

 

The dataset has been harmonized from heterogeneous historical sources and adjusted for gauge relocations, unit conversions, and reference level changes, providing a consistent long-term series suitable for hydrological and environmental research.
DOI: 10.5281/zenodo.17698826
title: Daily Water Levels of the Vistula River at Warsaw, 1799–2024: A Complete and Homogenized Long-Term Record

description: The dataset Vistula River Warsaw Daily Water Levels provides a continuous daily record of water stages of the Vistula River at Warsaw, comprising 82,453 observations from 1 February 1799 to 31 October 2024. Data are stored in a two-dimensional tabular format with one row per day and variables provided in columns.

The table contains the following fields:





date – calendar date in the format YYYY-MM-DD.




water_level_cm – daily water stage in centimetres relative to the reference gauge zero, homogenized and referred to the currently operating gauge Warsaw–Boulevards.




water_level_m_Kronstadt60 – water level converted to metres above sea level according to the Kronstadt 60 vertical reference system (m a.s.l.).




water_level_m_EVRF2007 – water level converted to metres above sea level according to the EVRF2007 vertical reference system (m a.s.l.).




data_type – classification of the record as observed (measured values) or reconstructed (gap-filled values).




original_observation – unadjusted water level observations recorded in the original measurement units, without any corrections or conversions.Units used over time: 

1799-02-01 – 1859-12-31: New Polish cal (≈ 2.4 cm)

1860-01-01 – 1879-12-01: English Imperial inch (≈ 2.54 cm)

1880-01-01 – 1910-10-31: Russian 1/100 sazhen (≈ 2.13 cm)

from 1910-11-01: centimetres (cm)




reconstruction_method – method applied in the case of reconstructed data, e.g. linear interpolation or gauge relationship.




remarks – additional information, notes on reconstructions quality.



 

Data sources:

The complete bibliography is provided in the file vistula_data_sources. The file includes titles, publishers, years of publication, and, where available, links to digital copies in online libraries.

 

The dataset has been harmonized from heterogeneous historical sources and adjusted for gauge relocations, unit conversions, and reference level changes, providing a consistent long-term series suitable for hydrological and environmental research.
DOI: 10.15468/dl.ewxwgr
title: Occurrence Download

description: A dataset containing 30146 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((17.762287 -34.668307, 30.355373 -34.668307, 30.355373 -23.342043, 17.762287 -23.342043, 17.762287 -34.668307))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Poaceae)"
 ]
}

 The dataset includes 30146 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005427-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q93dd2
title: Occurrence Download

description: A dataset containing 4620 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((17.762287 -34.668307, 30.355373 -34.668307, 30.355373 -23.342043, 17.762287 -23.342043, 17.762287 -34.668307))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Cupressaceae, Betulaceae, Pinaceae)"
 ]
}

 The dataset includes 4620 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005430-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17562913
title: Unconformity Informed Field-adaptive Synthetic Seismic Data Generation via Transfer Learning Enhanced CycleGAN for Fault Interpretation
DOI: 10.15468/dl.prqf7e
title: Occurrence Download

description: A dataset containing 5871122 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Royal Botanic Gardens, Kew - Herbarium Specimens"
 ]
}

 The dataset includes 5871122 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005414-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.54z739
title: Occurrence Download

description: A dataset containing 13260 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is The Survey Data of Mianhua and Huaping Islets Wildlife Refuge"
 ]
}

 The dataset includes 13260 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005432-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60493/tjf4b-4jx39
title: Quantitative imaging of apoplastic pH in plant roots via confocal microscopy.

description: The regulation of apoplastic pH is critical for plant growth and development, affecting processes such as nutrient uptake, cell wall expansion, and intercellular signaling. Conventional methods for measuring apoplastic pH, including pH indicators in growth media and ion-selective electrodes, often fall short of providing the spatial resolution and accuracy needed for detailed studies. Here, we present a protocol for the quantitative imaging of apoplastic pH in Arabidopsis thaliana roots using confocal microscopy combined with the fluorescent pH probe 8-hydroxy-pyrene-1,3,6-trisulfonic acid trisodium salt (HPTS), also called pyranine. This approach addresses the limitations of genetic sensors and traditional pH measurement techniques by offering a non-toxic, cost-effective, and precise method for pH assessment at cellular resolution via ratiometric confocal imaging. Additionally, we introduce an updated Fiji plugin for ratiometric image conversion. The new plugin enhances workflow efficiency by automating image processing while offering several options for customization, thereby ensuring reliable and reproducible results. The full procedure from staining to image analysis can be completed within approximately 2–4 hours, depending on the number of samples and imaging depth. This protocol provides a robust tool for plant physiologists to investigate apoplastic pH dynamics with high spatial resolution and accuracy in plant tissues.
DOI: 10.15468/dl.fpbw5d
title: Occurrence Download

description: A dataset containing 3164 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Agriades glandon",
 "Country is France"
 ]
}

 The dataset includes 3164 records from 148 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005435-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.krc9cm
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Iran (Islamic Republic of)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Capparis spinosa"
 ]
}

 The dataset includes 59 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005436-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30693650
title: Leaf litter decomposition in the tropics dynamically recovers across temporal and disturbance scales

description: Mass loss data from litterbags experiment on leaf litter decomposition in a tropical forest
DOI: 10.6084/m9.figshare.30693650.v1
title: Leaf litter decomposition in the tropics dynamically recovers across temporal and disturbance scales

description: Mass loss data from litterbags experiment on leaf litter decomposition in a tropical forest
DOI: 10.15468/dl.y7j8v2
title: Occurrence Download

description: A dataset containing 114098 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-121.8017421599446 42.28596289029541, -121.81321009479119 42.28399896612602, -121.82394042209499 42.2804103446008, -121.83352006704696 42.275335269818235, -121.84158053876112 42.26896919750829, -121.84781214441382 42.26155721921589, -121.85197588010597 42.253384575460856, -121.85391254318989 42.244765632840455, -121.85354872705135 42.23603175800724, -121.85089948686452 42.22751856136828, -121.84606759757412 42.21955300405207, -121.8392394574911 42.21244086292995, -121.83067781718741 42.20645503081697, -121.82071162941006 42.201825093689855, -121.8097234179699 42.19872857567923, -121.79813464934468 42.197284177981324, -121.7863896582158 42.19754726225125, -121.77493872612426 42.19950774522545, -121.7642209401728 42.20309048212694, -121.75464746586371 42.208158124738766, -121.74658585466277 42.21451634881207, -121.74034597287529 42.2219212576248, -121.73616808437012 42.230088686920524, -121.73421354643179 42.23870506395532, -121.73455848695498 42.247439412663205, -121.7371907244016 42.25595605049417, -121.7420100723368 42.26392749242998, -121.74883204175785 42.27104706572029, -121.75739482152433 42.27704074607039, -121.76736928542154 42.28167775268047, -121.77837164967761 42.28477948515444, -121.78997829317633 42.28622644844052, -121.8017421599446 42.28596289029541))",
 "Year is one of (2019, 2020, 2021, 2022, 2023, 2024, 2025)",
 "KingdomKey is one of (Animalia, Fungi, Plantae)"
 ]
}

 The dataset includes 114098 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005408-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b8uw7e
title: Occurrence Download

description: A dataset containing 114098 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-121.8017421599446 42.28596289029541, -121.81321009479119 42.28399896612602, -121.82394042209499 42.2804103446008, -121.83352006704696 42.275335269818235, -121.84158053876112 42.26896919750829, -121.84781214441382 42.26155721921589, -121.85197588010597 42.253384575460856, -121.85391254318989 42.244765632840455, -121.85354872705135 42.23603175800724, -121.85089948686452 42.22751856136828, -121.84606759757412 42.21955300405207, -121.8392394574911 42.21244086292995, -121.83067781718741 42.20645503081697, -121.82071162941006 42.201825093689855, -121.8097234179699 42.19872857567923, -121.79813464934468 42.197284177981324, -121.7863896582158 42.19754726225125, -121.77493872612426 42.19950774522545, -121.7642209401728 42.20309048212694, -121.75464746586371 42.208158124738766, -121.74658585466277 42.21451634881207, -121.74034597287529 42.2219212576248, -121.73616808437012 42.230088686920524, -121.73421354643179 42.23870506395532, -121.73455848695498 42.247439412663205, -121.7371907244016 42.25595605049417, -121.7420100723368 42.26392749242998, -121.74883204175785 42.27104706572029, -121.75739482152433 42.27704074607039, -121.76736928542154 42.28167775268047, -121.77837164967761 42.28477948515444, -121.78997829317633 42.28622644844052, -121.8017421599446 42.28596289029541))",
 "Year is one of (2019, 2020, 2021, 2022, 2023, 2024, 2025)",
 "KingdomKey is one of (Animalia, Fungi, Plantae)"
 ]
}

 The dataset includes 114098 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005407-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hr3zf5
title: Occurrence Download

description: A dataset containing 276 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Angelica sinensis"
 ]
}

 The dataset includes 276 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005437-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sbbdsf
title: Occurrence Download

description: A dataset containing 5871122 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Royal Botanic Gardens, Kew - Herbarium Specimens"
 ]
}

 The dataset includes 5871122 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005421-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t5zn65
title: Occurrence Download

description: A dataset containing 1032 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Living Specimen)",
 "TaxonKey is Glyptemys muhlenbergii"
 ]
}

 The dataset includes 1032 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005442-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17668771
title: A sympathetic-eosinophil axis orchestrates psychological stress to exacerbate skin inflammation
DOI: 10.5281/zenodo.17698914
title: A sympathetic-eosinophil axis orchestrates psychological stress to exacerbate skin inflammation
DOI: 10.15468/dl.s5cs3z
title: Occurrence Download

description: A dataset containing 30146 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((17.762287 -34.668307, 30.355373 -34.668307, 30.355373 -23.342043, 17.762287 -23.342043, 17.762287 -34.668307))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Poaceae)"
 ]
}

 The dataset includes 30146 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005444-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17698595
title: 25m version of LGN2024
DOI: 10.5281/zenodo.17698594
title: 25m version of LGN2024
DOI: 10.15468/dl.6zm2c2
title: Occurrence Download

description: A dataset listing the 317024 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Royal Botanic Gardens, Kew - Herbarium Specimens"
 ]
}

 The dataset's 317024 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005422-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t7ugww
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Indosasa longispicata"
 ]
}

 The dataset includes 15 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005449-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3wgtj5
title: Occurrence Download

description: A dataset containing 3842 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "OccurrenceStatus is Present",
 "TaxonKey is Euphractus sexcinctus"
 ]
}

 The dataset includes 3842 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005450-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8qwbbh
title: Occurrence Download

description: A dataset containing 4620 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((17.762287 -34.668307, 30.355373 -34.668307, 30.355373 -23.342043, 17.762287 -23.342043, 17.762287 -34.668307))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Cupressaceae, Betulaceae, Pinaceae)"
 ]
}

 The dataset includes 4620 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005446-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3svjpv
title: Occurrence Download

description: A dataset containing 15567 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((3.96793 44.07601,3.9862 44.04404,4.01571 44.03105,4.06805 44.02086,4.12706 44.02824,4.10353 44.06653,4.10282 44.08304,4.09036 44.11682,4.07947 44.12033,4.02642 44.09187,3.97935 44.08239,3.96793 44.07601))",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 15567 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005448-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zphfs5
title: Occurrence Download

description: A dataset containing 10026 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (North America, South America)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chromolaena odorata"
 ]
}

 The dataset includes 10026 records from 302 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005447-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16794553
title: Dataset for 'A Geological Carbon Cycle Sink Hosted by Ocean Crust Talus Breccias' - Coggon et al. Nature Geoscience

description: Supplementary materials dataset for the manuscript 'A Geological Carbon Cycle Sink Hosted by Ocean Crust Talus Breccias' - Coggon et al. Nature Geoscience 

Source data for seawater temperature for Figure 5. 

Source data (posterior probability distriubtions) for Figures ED 2 and 4.
DOI: 10.15468/dl.zgzw2h
title: Occurrence Download

description: A dataset containing 114098 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-121.8017421599446 42.28596289029541, -121.81321009479119 42.28399896612602, -121.82394042209499 42.2804103446008, -121.83352006704696 42.275335269818235, -121.84158053876112 42.26896919750829, -121.84781214441382 42.26155721921589, -121.85197588010597 42.253384575460856, -121.85391254318989 42.244765632840455, -121.85354872705135 42.23603175800724, -121.85089948686452 42.22751856136828, -121.84606759757412 42.21955300405207, -121.8392394574911 42.21244086292995, -121.83067781718741 42.20645503081697, -121.82071162941006 42.201825093689855, -121.8097234179699 42.19872857567923, -121.79813464934468 42.197284177981324, -121.7863896582158 42.19754726225125, -121.77493872612426 42.19950774522545, -121.7642209401728 42.20309048212694, -121.75464746586371 42.208158124738766, -121.74658585466277 42.21451634881207, -121.74034597287529 42.2219212576248, -121.73616808437012 42.230088686920524, -121.73421354643179 42.23870506395532, -121.73455848695498 42.247439412663205, -121.7371907244016 42.25595605049417, -121.7420100723368 42.26392749242998, -121.74883204175785 42.27104706572029, -121.75739482152433 42.27704074607039, -121.76736928542154 42.28167775268047, -121.77837164967761 42.28477948515444, -121.78997829317633 42.28622644844052, -121.8017421599446 42.28596289029541))",
 "Year is one of (2019, 2020, 2021, 2022, 2023, 2024, 2025)",
 "KingdomKey is one of (Animalia, Fungi, Plantae)"
 ]
}

 The dataset includes 114098 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005409-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16641845
title: Dataset for 'A Geological Carbon Cycle Sink Hosted by Ocean Crust Talus Breccias' - Coggon et al. Nature Geoscience

description: Supplementary materials dataset for the manuscript 'A Geological Carbon Cycle Sink Hosted by Ocean Crust Talus Breccias' - Coggon et al. Nature Geoscience 

Source data for seawater temperature for Figure 5. 

Source data (posterior probability distriubtions) for Figures ED 2 and 4.