cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57745/33xgmp
title: A Dataset Based Motorcycle Riders Behavior Study

description: The dynamics of a two-wheeled vehicle represent a higher level of complexity, with a high variety of rider practices, peculiarly during the bend-taking maneuver. This complexity is one reason why research on motorcyclists’ practiced trajectories is limited compared to cars. Another reason is the low representation of motorcycles in the land motor vehicle fleet. The dataset was collected within the framework of the French ANR research project VIROLO++. The objective was twofold. One concerns the analysis of the interactions between a rider and the motorcycle during a bend-taking maneuver. The second aims at studying the precise trajectory of a motorcycle. Multi-sensor instrumentation of a motorcycle (Honda CBF1000) has been achieved for precise trajectory reconstruction as well as the analysis of the interactions between the rider and the motorcycle during a ride. Real experiments were conducted on the “La Ferté Gaucher'' racetrack. The collected data include the precise location and attitude of the motorcycle and rider. Several sensors providing redundant data have been embedded to validate measurements. Two RTK GPS receivers were installed at the rear of the motorcycle to provide ground truth. A preliminary analysis was performed to validate the consistency of the dataset and the relevance of the sensors according to the aimed study.
DOI: 10.57745/1svoba
title: Production routes and properties of various plant powders intended for the manufacture of green products: Spectra and Images

description: This dataset includes images of the powders, SEM images, as well as various spectra and curves acquired (particle size, FTIR spectra, and Spectrofluorimetry spectra, thermogravimetric measurements), both in the form of txt or csv files and as images. All the files are organized into folders, with one folder for each powder. The dataset also includes an additional folder containing a general overview of the biochemical composition of the ten powders (table) and several graphs (bar and pie charts) for comparing global and monosaccharide contents.
DOI: 10.57745/4e9sge
title: Benchmark Comparison of Transcranial Ultrasound Simulation: Comparing the CIVA Healthcare Platform Method with Existing Compressional Wave Models

description: Data produced for publication titled: Benchmark Comparison of Transcranial Ultrasound Simulation: Comparing the CIVA Healthcare Platform Method with Existing Compressional Wave Models. Submitted to the Journal of the Acoustical Society of America
DOI: 10.57745/4vsxwh
title: Replication data for : Pointillism Wall Painting Drone Using Bouncing Frequency Control

description: This study presents an new robotic airborne solution for autonomous wall painting using a pointillism technique. The proposed dot-painting drone is a quadcopter equipped with an additional forward propulsion unit and a spring-mounted painting pad. It is designed to bounce on a vertical wall in order to print dots at a controlled frequency along a predefined trajectory. A dynamic model of the system is derived and used to control accurately the bouncing frequency as well as the position of the robot. The performance of the system is validated experimentally, demonstrating successful indoor painting capability of pointillism drawing on vertical walls. This work represents a first step toward fully autonomous, large-scale mural reproduction using aerial robotics.
DOI: 10.57745/5yxxn1
title: Microbial species abundances from public project PRJEB6337 on liver cirrhosis

description: In the context of the GuildBuilder, this dataset was created to assess the performances of network inference methods for liver cirrhosis risk gut microbiome alterations. This dataset corresponds to stool samples from 216 Chinese individuals sequenced using whole-metagenome sequencing techniques, a dataset deposited in the European Nucleotide Archive (ENA) under accession number PRJEB6337. Among this population, 102 individuals are healthy and 114 are suffering from liver cirrhosis. Abundances of all microbial species (metagenomic species or MSP) detected using 10.4 million IGC2 gut gene catalogue are extracted using the Meteor software suite that create a gene count table by mapping high quality reads onto the gene catalogue, using Bowtie2. Abundance of each MSP is computed as the mean abundance of 100 marker genes selected for each MSP, where the gene abundance is the read count normalized by gene length. The final table of size 1990 MSP by 216 individuals records all the normalized abundances.
DOI: 10.57745/6m7xek
title: Dr_Forest_Tick_2021

description: Bourdin et al., (n.d.), data for the article "Lower prevalence of Lyme disease pathogens in mixed deciduous – coniferous forests"
DOI: 10.57745/4acnjf
title: Source Data for G4 density in M. javanica

description: We used the G4-Hunter software76 with a window size of 25 and a minimal score of 1.2 to detect regions possibly forming G4-quadruplexes on the composite terminal repeats as well as the whole genome sequences of Meloidogyne javanica. Using an in-house script, we retrieved only the non-overlapping positions, distant by more than 25 bp, and the score for each G4-quadruplex position, and we plotted their frequency using Rstudio.
DOI: 10.57745/5iqmst
title: RDF graph pairs

description: Datasets for profiling dataset pairs
DOI: 10.57745/5mxzsj
title: Meloidogyne enterolobii assemblies

description: We present the assembly of Meloidogyne enterolobii's genomes using the high-fidelity long-read sequencing method developed by Pacific Biosciences. Initially, we filtered out very low-quality reads ( &lt; Q9, parameter --min-rq=0.88 ) and produced a draft consensus sequence with CCS (v6.4.0) and ACTC (v0.2.0). To correct for errors introduced by the PacBio Sequel II system, we aligned the subreads against the draft consensus sequence with a gap-aware sequence transformer, DeepConsensus (v1.1.0, Baid et al., 2023). This yielded 2,449,079 cleaned reads with an average Qscore of 34.04 for M. enterolobii. Following QC, the genome assembly was carried out using Peregrine-2021 (v0.4.11, Chin, J. ,2023). The number of best overlaps for each initial graph was increased to the default setting (parameter --bestn8). For the mitochondrial genome sequence, we used the ALADIN package (v1.1) with a complete M. enterolobii mitochondrion previously downloaded from the GenBank database (BioProject: PRJNA927338) as a reference seed sequence. The resulting nuclear genome assembly spans a total length of 273 Mbp and comprises 556 contigs, a GC% of 30 and an N50 value of 2.11 Mb (longest contig = 8,284,238 bp). The circular assembly of the mitochondrion spans 19,193 bp in length with a GC content of 17.2%.
DOI: 10.57745/6mzus7
title: Use of embryonic resources and larval feeding activity determine juvenile performance of the common prawn Palaemon serratus

description: We reared Palaemon serratus shrimp produced by 8 different females from the embryonic and larval stages of development through to the first 14 days of juvenile life. At each stage, groups were incubated under different conditions, i.e. 12 and 18°C during embryonic development, groups of 50 larvae at 16 and 18°C during larval development with 3 different prey concentrations (2, 4 or 10 Artemia nauplii/mL) and 18 and 24°C during juvenile development. We weighed and measured the total lipid content of hatching larvae ("Hatching.csv"). For each group of larvae, we monitored developmental pathways, metamorphosis rate and average developmental time ("Metamorphosis_data_per_vessel.csv"). We weighed each juvenile at metamorphosis ("Metamorphosis_data_per_larvae.csv"). For each group of juveniles, we monitored survival and growth after 14 days ("Juvenile_data_per_juvenile.csv" and "Juvenile_data_per_condition.csv").
DOI: 10.57745/2g1vcp
title: Evolutionary analyses and expression patterns of TCP family genes in Ranunculales

description: this dataset contains the transcript and protein assemblies for Aconitum napellus, Clematis stans, Ficaria verna, Helleborus orientalis and Nigella damascena inferred from de novo assembly of Illumina RNA-seq reads. The rawsequencing data are available from CATdb under the accession ngs2015_16_ranunculaceae
DOI: 10.57745/5b1xgu
title: Segmentation of ascochyta blight symptoms on pea stipules

description: Data and trained machine learning algorithm for pixel segmentation of ascochyta blight symptoms on pea stipules in standard biotests : original RGB images, annotated images (ground truth), predicted images, trained weka classifier for pixel segmentation and python code for assessing segmentation accuracy.
DOI: 10.57745/6wydzk
title: Tolerance analysis of Janssen Mechanism

description: The Janssen mechanism is a complex mechanical system known for its nonlinear behavior. This mechanism consists of multiple interconnected bars, which collectively produce a walking motion. One of the key characteristics of the Janssen mechanism is that the walking motion is not linearly related to the lengths of the bars. Instead, the movement is governed by intricate geometric relationships and interactions between the bars. The walking motion performance is influenced by three geometrical requirements: walking stability (KC1), walking length (KC2), and assembly condition (KC3). This mechanism is an eight-link, one-degree-of-freedom planar linkage with three movement loops. In this study, we focus on one movement loop. The datasets are the results of multiple Monte Carlo simulations aimed at analyzing the impact of dimensional variations of the thirteen bars in the Janssen mechanism on the fulfilment of three geometrical requirements. These results were utilized to test various tolerance allocation strategies.
DOI: 10.57745/05fhzu
title: Seismic shot gather data acquired at reduced scale with a measurement bench (called MUSC : Measurement at Ultrasonic SCale) in a homogeneous medium including a vertical rigid inclusion

description: This dataset collection was acquired as part of Michaël Darche's post-doctoral research within the ANR Asiri+ project, using the MUSC (Measurement at Ultrasonic SCale) measuring bench at the Université Gustave Eiffel.   These are ultrasonic measurements generated and acquired from the surface of the resin blocks described below, according to configuration geometries and recording parameters also detailed in the Readme file.
DOI: 10.57745/2nykhf
title: REE concentration analyses of minerals and whole rock samples from Evisa peralkaline complex (France)

description: This dataset comprises geochemical analyses from the Evisa peralkaline rare-metal granite (Corsica, France). A comprehensive analysis of the whole rock and specific mineral species was conducted using multiple analytical methods, including ICP-AES, ICP-MS, EPMA, and LA-ICP-MS. The initial objective of this study was to explore the conditions of crystallization and subsequent alteration of amphibole-bearing rare earth granites, which contain significant concentrations of REE (rare earth elements), especially the heavier ones (HREE). At Evisa, the distribution of REE within the various rock types was found to be heterogeneous, as evidenced by Whole Rock Analyses, and incorporated into a variety of exotic minerals, the latter being the subject of several types of in-situ analyses. Furthermore, the numerous generations of hydrothermal alterations highlight the successive remobilization of REE.
DOI: 10.57745/7gx8nv
title: Contour des masses d'eau souterraines du modèle RECHARGE

description: Découpage de la France en masses d'eau souterraines, à l’échelle desquelles sont fournies les recharges potentielles par les précipitations simulées avec le modèle RECHARGE
DOI: 10.57745/2yskoz
title: Determination of the sugar content of lignins by High-Performance Anion Exchange Chromatography analysis (HPAEC-Sugar-Analysis)

description: Lab-extracted organosolv lignins have been analysed using HPAEC sugar analysis. This dataset includes: - 1 file explaining the method; - 1 file summarizing the relative content of lignin sugar monomers (fucose, arabinose, rhamnose, galactose, glucose, xylose, galacturonic and glucuronic acid) of organosolv lignin samples.
DOI: 10.57745/6lmhsa
title: Continuous moderate and intermittent high-intensity exercise in youth with type 1 diabetes: which protection for dysglycemia?

description: Available after publication of the paper
DOI: 10.57745/4mdynu
title: Replication Data for: Impact of input forcings variability on the global sensitivity analysis of a hydrological model

description: Moisture profiles, forcing rain data and model parameters corresponding to PESHMELBA model simulations used for calculating Sobol' indices in the paper : "Impact of input forcings variability on the global sensitivity analysis of a hydrological model"
DOI: 10.57745/3c63j0
title: Multi-vehicles dataset with Spoofing of GNSS position

description: ** Dataset Overview ** This project contains the dataset collected from the Renault Zoe demonstrator vehicles, part of the PRETIL platform, which belongs to the CRIStAL laboratory at the University of Lille. The data was gathered as part of an experimental study focused on the impact of GNSS spoofing on safety-critical land transportation localization systems within a cooperative fleet. This dataset was instrumental in conducting the study presented in the paper titled "Assessing GNSS Spoofing Impact on A Safety-Critical Land Transportation Localization Function Within a Cooperative Fleet: An End-Users Focused Experimental Study" published in ION GNSS+ 2024. ** Data context ** The dataset is structured around three Renault Zoe vehicles (referred to as CAR1, CAR2, and CAR3) equipped with various sensors for GNSS, IMU, LiDAR, and CAN bus data. Each vehicle recorded its data using different ROS (Robot Operating System) versions, with CAR1 (White) operating on ROS1 and the remaining two cars (CAR2 Blue and CAR3 Grey) on ROS2. The dataset includes the following sensor data: - GNSS positions from multiple receivers - 3D point clouds from LIDAR systems - IMU (Inertial Measurement Unit) data from onboard sensors - CAN bus data recording the internal vehicle state (speed, steering, etc.) - Synchronous timestamps and transforms (TF frames) to enable precise localization and mapping - Spoofed position of CAR1 generated using Safran Skydel GNSS emulator.
DOI: 10.57745/6l14sw
title: Projet ACV Bio

description: ANALYSE DU CYCLE DE VIE DE PRODUITS ISSUS DE L’AGRICULTURE BIOLOGIQUE FRANÇAISE L’objectif principal du projet ACV-Bio était la production de données d’inventaire du cycle de vie (ICV) et d’analyse du cycle de vie (ACV) d’une diversité de produits végétaux et animaux de l’agriculture biologique (AB) française à la sortie de la ferme. Les données d’ICV ont permis d’enrichir la base de données AGRIBALYSE. La sortie principale du projet ACV Bio est la production et la mise à disposition des données d’ICV des productions végétales et animales (168 données ICV, 10 productions) dans la base de données AGRIBALYSE, accessible dans les logiciels experts. Les données ACV Bio produites ne sont pas des données moyenne France, elles ne peuvent donc pas être utilisées de la même façon que les données concernant les itinéraires techniques en agriculture conventionnelle disponibles dans la BDD AGRIBALYSE. Projet de recherche financé par l’ADEME et le Ministère de la Transition Ecologique et Solidaire et coordonné par INRAE. Le projet regroupe des partenaires de la recherche et de l’enseignement (INRAE Rennes et Colmar, ESA d’Angers) et des partenaires des instituts techniques (ARVALIS, Terres Inovia, IDELE, IFIP, ITAVI, IFV, ITAB).
DOI: 10.57745/6hzage
title: ECOALIM Alimentation animale

description: Ce jeu de données regroupe des outils destinés aux fabricants d’aliments et à la recherche/développement concernant les impacts environnementaux des intrants alimentaires des élevages. Ces derniers ont été produits dans le cadre d’un projet EcoAlim (2013-2016) financé par le CASDAR et l’ADEME. Ces travaux s’insèrent dans le programme AGRIBALYSE qui fournit des références environnementales pour les produits agricoles et alimentaires français. Ecoalim constitue le volet nutrition animale de la base Agribalyse.
DOI: 10.57745/5pgcz5
title: RPG complété 2022 Région Pays de la Loire

description: RPG complété 2022. Complète le RPG campagne 2022 pour les départements de la région Pays de la Loire (44, 49, 53, 72, 85). (contient les parcelles agricoles hors RPG) Données géographiques (vectorielles, shapefile), parcellaires. Sources : IGN, OSO/Cesbio. Traitements : INRAE US ODR, 2024.
DOI: 10.57745/8bw5ke
title: Multidisciplinary tracking of a highly pathogenic avian influenza H5N1 outbreak in Griffon vultures in Southern Europe, 2022

description: The data held in this repository relate to the manuscript J. Hirschinger, U. Höfle, A. Sánchez-Cano, C. Guinat, G. Croville , M. Barral, J.A. Donázar, C. Le Gall Ladevèze, M. Walch, V. Alvarez, X. Gerrikagoitia, L. Du Plessis, S. Dellicour, E Arrondo, J.A. Sánchez-Zapata, A. Cortés-Avizanda, S. Minayo, J. Tornos, S. Perret, T. Boulinier, P. Orabi, A. Van De Wiele, J.L. Guerin, O. Duriez, G. Le Loc'h. Multidisciplinary tracking of a highly pathogenic avian influenza H5N1 outbreak in Griffon vultures in Southern Europe, 2022.
DOI: 10.57745/4c03og
title: CherryChèvre: A Fine-Grained Dataset for Goat Detection in Natural Environments (yolo version)

description: We introduce a new dataset for goat detection that contains 6160 annotated images captured under varying environmental conditions. The dataset is intended for developing machine learning algorithms for goat detection, with applications in precision agriculture, animal welfare, behaviour analysis, and animal husbandry. The annotations were performed by expert in this filed, ensuring high accuracy and consistency. The dataset is publicly available and can be used as a benchmark for evaluating existing algorithms. This dataset advances research in computer vision for agriculture.
DOI: 10.57745/5qqttn
title: Phenotypic data of a grapevine bi-parental progeny for three experiments

description: Phenotypic data (both agronomic and oenological) for a bi-parental progeny (Grenache N - Syrah N) obtained in three sites from 2005 to 2019.
DOI: 10.57745/6o9fqj
title: Pesticide use and large patch size reduce natural pest control potential in vineyards

description: Données collectés sur le site atelier BACCHUS de 2018 à 2022 et compléter à l'aide de données de la Pesticide Properties Database. Les données contiennent des informations sur l'utilisation des pesticides (IFT, Pesticide Load Index), sur la prédation des oeufs de tordeuse (pred_proportion) et sur des variables de gestion (nombre d'intervention au sol) et de paysage (% de vignes, forêts, prairies, dans un rayon de 500m autour des parcelles)
DOI: 10.57745/73dgrc
title: Assemblies of the Charolais breed bovine genome

description: These datasets include all the assemblies of the Charolais bovine genome that were performed with data produced by using different sequencing technologies, including Oxford Nanopore, PacBio CLR data and Illumina 10X genomics linked-reads. The Research Institute for Agriculture, Food and Environment INRAE, with the support of a consortium of private companies and Occitanie region, carried out the SeqOccIn research program.
DOI: 10.57745/84ujql
title: Epicéa commun / Picea abies

description: Fichier d'impression 3D d'anatomie du bois file for 3D printer : Wood anatomy
DOI: 10.57745/8kpimn
title: Base de données poissons Nivelle 1977-2024

description: La Nivelle est un petit fleuve côtier de la côte basque. Depuis plus de quarante ans des données (essentiellement tissus et écailles) sont régulièrement collectées sur la rivière via des pêches à l'électricité, des captures aux stations de contrôle (passes à poissons) et sur les différents projets de recherche qui se déclinent sur le terrain. Les données de cette collection, forte de plusieurs dizaines de milliers de données et d'échantillons, ont intégré récemment la banque de données BD Poisson gérée à l'U3E de L'INRAE de Rennes. Cette base de données dédiée au stockage des données collectées sur le terrain regroupe toutes les informations relatives aux captures effectuées sur les sites de l'ORE Diapfc, observatoire de recherche en environnement « Poissons diadromes dans les Fleuves Côtiers » au sein duquel la Nivelle est associée à d’autres cours d’eau observatoire comme l’Oir et la Bresle en Normandie et le Scorff en Bretagne. Le présent Dataset a pour fonction de proposer toutes les données numériques collectées sur la Nivelle entre 1977 et 2023 sur toutes les espèces échantillonnées aux cours des différentes campagnes d'échantillonnage à savoir : - Les pêches à l'électricité sur saumon, truite et anguille. - Les captures de toutes les espèces de poissons aux stations de contrôle d'Uxondoa et Olha. - De manière plus anecdotique, toute autre campagne dans le cadre de projet de recherche particulier (expérimentation, suivis intermittent) qui génère de la donnée susceptible d'alimenter la base.
DOI: 10.57745/4rnesm
title: AB-SR (AntiBody Sequence Reconstructor) software: datasets for complete benchmarking

description: Files, folders, tabular data and some raw data used in the publication: AB-SR reconstructs polyclonal antibody Fv domains after bottom-up proteomic de-novo sequencing (N. Maillet & B. Saunier). The AB-SR software reconstructs the sequences of most pairs of heavy and light chain variable regions from (in silico) pools containing up to 500 immunoglobulins in just a few minutes. For each Figure, the data before and after AB-SR software are available (see README.md for detailed explanations). Data presented here are used to benchmark AB-SR. More precisely, each experiment consists in IgGs coming from public databases being in silico digested using RPG software. Resulting peptides are then fed to AB-SR that reconstructs most initial IgGs.
DOI: 10.57745/abj8oq
title: World Countries Boundaries

description: 1 Overview World Administrative Boundaries are available from various sources (UN, WHO, Global Administrative Areas [GADM], Natural Earth, World Bank). We would like to have the most accurate one with a reasonable size for an interactive world map in a Data Exploration Application, called CLIMINET. We provide a complete Geospatial Data that covers at least all 249 countries in the international ISO 3166-1 standard. We aim to maintain a reasonable data size, with countries' boundaries as accurate as possible, to ensure FLUIDITY in data visualization applications. The data are optimized for efficient performance and smooth interactions in interactive world maps for the best possible user experience. 2. Data Overview Number of Spatial Features: 275 countries/territories Data Sources: Compiled from multiple sources to ensure completeness and precision (WHO, Global Administrative Areas [GADM]) CRS Options: WGS84 [EPSG:4326] World Robinson (1963) [ESRI:54030] World Winkel-Tripel (Winkel III) - (1921) [ESRI:54042] Data Level: Level 0 (Countries) File Format: GeoJSON File Size: WGS84 [EPSG:4326]: 18.86 MB World Robinson (1963) [ESRI:54030]: 30.91 MB World Winkel-Tripel (Winkel III) - (1921) [ESRI:54042]: 30.90 MB 3. Data Revision Date The data were last updated on 2024-12-19. For further information on data structure and implementation, refer to the metadata files.