cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.u5xca3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Drymarchon couperi)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002015-250710112747441/datasets/export for details.
DOI: 10.15468/dl.j9njpr
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geranium dissectum",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 40 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002017-250710112747441/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dp8cxa
title: Occurrence Download

description: A dataset containing 77108 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Global Roadkill Data: a dataset on terrestrial vertebrate mortality caused by collision with vehicles (Systematic Records)"
 ]
}

 The dataset includes 77108 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002005-250710112747441/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jz4svr
title: Occurrence Download

description: A dataset containing 5461 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Sauromalus ater)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 5461 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002019-250710112747441/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cfmnrq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Sauromalus ater)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002018-250710112747441/datasets/export for details.
DOI: 10.15468/dl.g65su8
title: Occurrence Download

description: A dataset containing 347 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Sauromalus ater)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 347 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002020-250710112747441/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15860628
title: Network Analysis and Community Detection R-Code for Mental Health Assessment Data from Veteran and First Responder Families

description: Here's the revised Zenodo description:

Description:

This repository contains the complete R analysis code and supporting data files for the manuscript "Mental health symptom networks in veteran and first responder family members" published in Communications Psychology. The code performs network analysis and community detection on mental health assessment data from 317 treatment-seeking family members of trauma-exposed veterans and first responders.

Key Analyses Included:



Network estimation using Gaussian graphical models (EBICglasso)

Bootstrap stability analysis for network reliability

Exploratory Graph Analysis (EGA) for community detection

Dimension stability assessment across bootstrap samples

Node centrality and expected influence calculations

Power analysis for sample size adequacy

High-resolution figure generation (300+ DPI) for all manuscript figures


Data Files Included: This repository includes the underlying data files supporting Figures 1-3 from the manuscript, which can be fully reproduced using the provided R code. These CSV files contain the processed analysis results including bootstrap stability data, network edge weights, and community detection outcomes, allowing for complete replication of all visualizations without access to the original raw clinical data.

Data Structure: The code processes responses from three standardized clinical measures: PTSD Checklist for DSM-5 (PCL-5), Patient Health Questionnaire-9 (PHQ-9), and Generalized Anxiety Disorder-7 (GAD-7). Overlapping items were removed to ensure each symptom was represented only once in the network.

Output Files:



All manuscript figures in multiple high-resolution formats (PNG, TIFF, SVG/PDF)

CSV data files for Figures 1-3 enabling complete reproduction

Network edge weights and confidence intervals

Node centrality measures and community assignments

Bootstrap stability results and power analysis outputs


Software Requirements:



R version 4.0+

Required packages: bootnet, qgraph, EGAnet, networktools, tidyverse, ggplot2, and others (full list in code)


Reproducibility: All analyses use set random seeds (seed = 2711) to ensure complete reproducibility. The code includes comprehensive documentation, parameter specifications, and session information for transparency. The included data files allow researchers to reproduce all manuscript figures without requiring access to the original clinical dataset.

Citation: If you use this code or data files, please cite both the original manuscript and this code repository. The analysis methodology follows established best practices for psychological network analysis and community detection as implemented in the bootnet and EGAnet R packages.

Keywords: network analysis, mental health, veterans, first responders, family members, PTSD, depression, anxiety, community detection, bootstrap stability, R code, reproducible research, data transparency
DOI: 10.5281/zenodo.15860729
title: Network Analysis and Community Detection R-Code for Mental Health Assessment Data from Veteran and First Responder Families

description: Here's the revised Zenodo description:

Description:

This repository contains the complete R analysis code and supporting data files for the manuscript "Mental health symptom networks in veteran and first responder family members" published in Communications Psychology. The code performs network analysis and community detection on mental health assessment data from 317 treatment-seeking family members of trauma-exposed veterans and first responders.

Key Analyses Included:



Network estimation using Gaussian graphical models (EBICglasso)

Bootstrap stability analysis for network reliability

Exploratory Graph Analysis (EGA) for community detection

Dimension stability assessment across bootstrap samples

Node centrality and expected influence calculations

Power analysis for sample size adequacy

High-resolution figure generation (300+ DPI) for all manuscript figures


Data Files Included: This repository includes the underlying data files supporting Figures 1-3 from the manuscript, which can be fully reproduced using the provided R code. These CSV files contain the processed analysis results including bootstrap stability data, network edge weights, and community detection outcomes, allowing for complete replication of all visualizations without access to the original raw clinical data.

Data Structure: The code processes responses from three standardized clinical measures: PTSD Checklist for DSM-5 (PCL-5), Patient Health Questionnaire-9 (PHQ-9), and Generalized Anxiety Disorder-7 (GAD-7). Overlapping items were removed to ensure each symptom was represented only once in the network.

Output Files:



All manuscript figures in multiple high-resolution formats (PNG, TIFF, SVG/PDF)

CSV data files for Figures 1-3 enabling complete reproduction

Network edge weights and confidence intervals

Node centrality measures and community assignments

Bootstrap stability results and power analysis outputs


Software Requirements:



R version 4.0+

Required packages: bootnet, qgraph, EGAnet, networktools, tidyverse, ggplot2, and others (full list in code)


Reproducibility: All analyses use set random seeds (seed = 2711) to ensure complete reproducibility. The code includes comprehensive documentation, parameter specifications, and session information for transparency. The included data files allow researchers to reproduce all manuscript figures without requiring access to the original clinical dataset.

Citation: If you use this code or data files, please cite both the original manuscript and this code repository. The analysis methodology follows established best practices for psychological network analysis and community detection as implemented in the bootnet and EGAnet R packages.

Keywords: network analysis, mental health, veterans, first responders, family members, PTSD, depression, anxiety, community detection, bootstrap stability, R code, reproducible research, data transparency
DOI: 10.5281/zenodo.15860656
title: SLGCA: Spatial Cross-Level Graph Contrastive Autoencoder for multi-slice spatial domain Identification and microenvironment exploration
DOI: 10.5281/zenodo.15860655
title: SLGCA: Spatial Cross-Level Graph Contrastive Autoencoder for multi-slice spatial domain Identification and microenvironment exploration
DOI: 10.15468/dl.fdgj7q
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Parnassius ariadne"
 ]
}

 The dataset includes 105 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002021-250710112747441/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gm3tb7
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geranium molle",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 91 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002022-250710112747441/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p6c58f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Sauromalus ater)",
 "Country is one of (Algeria, Angola, Benin, Botswana, British Indian Ocean Territory, Burkina Faso, Burundi, Cabo Verde, Cameroon, Central African Republic, Chad, Comoros, Congo, Congo, Democratic Republic of the, Côte d’Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Eswatini, Ethiopia, French Southern Territories, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Ascension and Tristan da Cunha, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, South Sudan, Sudan, Tanzania, United Republic of, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002025-250710112747441/datasets/export for details.
DOI: 10.15468/dl.ynkawk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Sauromalus ater)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002023-250710112747441/datasets/export for details.
DOI: 10.15468/dl.wvm5mg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Sauromalus ater)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002024-250710112747441/datasets/export for details.
DOI: 10.5281/zenodo.15860762
title: Hildesheim Löwen-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.5281/zenodo.15860763
title: Hildesheim Löwen-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.5281/zenodo.15815417
title: Data for the optimization of the PA6 depolymerization yield
DOI: 10.5281/zenodo.15815418
title: Data for the optimization of the PA6 depolymerization yield
DOI: 10.15468/dl.8fahz7
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geranium pusillum",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002027-250710112747441/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v6tgz3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Gopherus polyphemus)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002030-250710112747441/datasets/export for details.
DOI: 10.15468/dl.qw5pkz
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Gopherus polyphemus)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002029-250710112747441/datasets/export for details.
DOI: 10.15468/dl.y6zcka
title: Occurrence Download

description: A dataset containing 15289 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Gopherus polyphemus)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 15289 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002028-250710112747441/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15860774
title: Hildesheim Nord-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.5281/zenodo.15860775
title: Hildesheim Nord-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.6084/m9.figshare.29481053
title: Raw sequence

description: Included all raw sequences from metabarcoding. nc1~nc4 are four negative control samples.
DOI: 10.6084/m9.figshare.29481053.v1
title: Raw sequence

description: Included all raw sequences from metabarcoding. nc1~nc4 are four negative control samples.