cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23696376
title: <strong>Figure 2 Manipulation of actin filament dynamics does not impact the decrease in the ATP/ADP ratio or ATP level induced by blockade of ATP production in either growth cones or cell bodies.</strong>

description: The growth cone was defined as the distal 10 microns of the axon shaft. If a growth cone exhibited lamellipodia then the distal most extent of the lamellipodium was taken as the distal most point on the growth cone, if not the distal most extent of the axon shaft was used as the defining distal point. Quantitative analysis of images was performed using Zeiss AxioVision software. The region of interest encompassing the growth cone was outlined and measurements of mean pixel fluorescence intensity in all relevant channels was determined for generation of ratios. For each channel, the mean intensity value obtained from the background of the image not containing any cells was subtracted from the mean intensity in the growth cone region of interest prior to determination of the ratio. Acquisition settings were chosen to generate maximum pixel values between 20-30% of the dynamic range to allow for detection of both decreases and increases in intensity in response to experimental treatments.
DOI: 10.6084/m9.figshare.23696376.v1
title: <strong>Figure 2 Manipulation of actin filament dynamics does not impact the decrease in the ATP/ADP ratio or ATP level induced by blockade of ATP production in either growth cones or cell bodies.</strong>

description: The growth cone was defined as the distal 10 microns of the axon shaft. If a growth cone exhibited lamellipodia then the distal most extent of the lamellipodium was taken as the distal most point on the growth cone, if not the distal most extent of the axon shaft was used as the defining distal point. Quantitative analysis of images was performed using Zeiss AxioVision software. The region of interest encompassing the growth cone was outlined and measurements of mean pixel fluorescence intensity in all relevant channels was determined for generation of ratios. For each channel, the mean intensity value obtained from the background of the image not containing any cells was subtracted from the mean intensity in the growth cone region of interest prior to determination of the ratio. Acquisition settings were chosen to generate maximum pixel values between 20-30% of the dynamic range to allow for detection of both decreases and increases in intensity in response to experimental treatments.
DOI: 10.6084/m9.figshare.23696343
title: <strong>Figure 4. AICAR treatment increases the ATP/ADP ratio in growth cones. </strong>

description: The growth cone was defined as the distal 10 microns of the axon shaft. If a growth cone exhibited lamellipodia then the distal most extent of the lamellipodium was taken as the distal most point on the growth cone, if not the distal most extent of the axon shaft was used as the defining distal point. Quantitative analysis of images was performed using Zeiss AxioVision software. The region of interest encompassing the growth cone was outlined and measurements of mean pixel fluorescence intensity in all relevant channels was determined for generation of ratios. For each channel, the mean intensity value obtained from the background of the image not containing any cells was subtracted from the mean intensity in the growth cone region of interest prior to determination of the ratio. Acquisition settings were chosen to generate maximum pixel values between 20-30% of the dynamic range to allow for detection of both decreases and increases in intensity in response to experimental treatments.
DOI: 10.6084/m9.figshare.23696343.v1
title: <strong>Figure 4. AICAR treatment increases the ATP/ADP ratio in growth cones. </strong>

description: The growth cone was defined as the distal 10 microns of the axon shaft. If a growth cone exhibited lamellipodia then the distal most extent of the lamellipodium was taken as the distal most point on the growth cone, if not the distal most extent of the axon shaft was used as the defining distal point. Quantitative analysis of images was performed using Zeiss AxioVision software. The region of interest encompassing the growth cone was outlined and measurements of mean pixel fluorescence intensity in all relevant channels was determined for generation of ratios. For each channel, the mean intensity value obtained from the background of the image not containing any cells was subtracted from the mean intensity in the growth cone region of interest prior to determination of the ratio. Acquisition settings were chosen to generate maximum pixel values between 20-30% of the dynamic range to allow for detection of both decreases and increases in intensity in response to experimental treatments.
DOI: 10.6084/m9.figshare.23696337
title: <strong>Figure 5</strong>. <strong>Neither depolymerization nor hyper-stabilization of actin filaments impacts the ATP/ADP ratio of growth cones in continuous NGF.</strong>

description: The growth cone was defined as the distal 10 microns of the axon shaft. If a growth cone exhibited lamellipodia then the distal most extent of the lamellipodium was taken as the distal most point on the growth cone, if not the distal most extent of the axon shaft was used as the defining distal point. Quantitative analysis of images was performed using Zeiss AxioVision software. The region of interest encompassing the growth cone was outlined and measurements of mean pixel fluorescence intensity in all relevant channels was determined for generation of ratios. For each channel, the mean intensity value obtained from the background of the image not containing any cells was subtracted from the mean intensity in the growth cone region of interest prior to determination of the ratio. Acquisition settings were chosen to generate maximum pixel values between 20-30% of the dynamic range to allow for detection of both decreases and increases in intensity in response to experimental treatments.
DOI: 10.6084/m9.figshare.23696337.v1
title: <strong>Figure 5</strong>. <strong>Neither depolymerization nor hyper-stabilization of actin filaments impacts the ATP/ADP ratio of growth cones in continuous NGF.</strong>

description: The growth cone was defined as the distal 10 microns of the axon shaft. If a growth cone exhibited lamellipodia then the distal most extent of the lamellipodium was taken as the distal most point on the growth cone, if not the distal most extent of the axon shaft was used as the defining distal point. Quantitative analysis of images was performed using Zeiss AxioVision software. The region of interest encompassing the growth cone was outlined and measurements of mean pixel fluorescence intensity in all relevant channels was determined for generation of ratios. For each channel, the mean intensity value obtained from the background of the image not containing any cells was subtracted from the mean intensity in the growth cone region of interest prior to determination of the ratio. Acquisition settings were chosen to generate maximum pixel values between 20-30% of the dynamic range to allow for detection of both decreases and increases in intensity in response to experimental treatments.
DOI: 10.6084/m9.figshare.23696217
title: <strong>Figure 6.</strong> <strong>Acute NGF treatment does not change the ATP/ADP ratio in growth cones but hyperpolarizes mitochondria.</strong>

description: The growth cone was defined as the distal 10 microns of the axon shaft. If a growth cone exhibited lamellipodia then the distal most extent of the lamellipodium was taken as the distal most point on the growth cone, if not the distal most extent of the axon shaft was used as the defining distal point. Quantitative analysis of images was performed using Zeiss AxioVision software. The region of interest encompassing the growth cone was outlined and measurements of mean pixel fluorescence intensity in all relevant channels was determined for generation of ratios. For each channel, the mean intensity value obtained from the background of the image not containing any cells was subtracted from the mean intensity in the growth cone region of interest prior to determination of the ratio. Acquisition settings were chosen to generate maximum pixel values between 20-30% of the dynamic range to allow for detection of both decreases and increases in intensity in response to experimental treatments.
DOI: 10.6084/m9.figshare.23696217.v1
title: <strong>Figure 6.</strong> <strong>Acute NGF treatment does not change the ATP/ADP ratio in growth cones but hyperpolarizes mitochondria.</strong>

description: The growth cone was defined as the distal 10 microns of the axon shaft. If a growth cone exhibited lamellipodia then the distal most extent of the lamellipodium was taken as the distal most point on the growth cone, if not the distal most extent of the axon shaft was used as the defining distal point. Quantitative analysis of images was performed using Zeiss AxioVision software. The region of interest encompassing the growth cone was outlined and measurements of mean pixel fluorescence intensity in all relevant channels was determined for generation of ratios. For each channel, the mean intensity value obtained from the background of the image not containing any cells was subtracted from the mean intensity in the growth cone region of interest prior to determination of the ratio. Acquisition settings were chosen to generate maximum pixel values between 20-30% of the dynamic range to allow for detection of both decreases and increases in intensity in response to experimental treatments.
DOI: 10.6084/m9.figshare.23696193
title: <strong>Figure 7.</strong> <strong>Suppression of actin filament dynamics in response to acute NGF treatment blocks NGF-induced growth cone elaboration but does not affect the ATP/ADP ratio.</strong>

description: The growth cone was defined as the distal 10 microns of the axon shaft. If a growth cone exhibited lamellipodia then the distal most extent of the lamellipodium was taken as the distal most point on the growth cone, if not the distal most extent of the axon shaft was used as the defining distal point. Quantitative analysis of images was performed using Zeiss AxioVision software. The region of interest encompassing the growth cone was outlined and measurements of mean pixel fluorescence intensity in all relevant channels was determined for generation of ratios. For each channel, the mean intensity value obtained from the background of the image not containing any cells was subtracted from the mean intensity in the growth cone region of interest prior to determination of the ratio. Acquisition settings were chosen to generate maximum pixel values between 20-30% of the dynamic range to allow for detection of both decreases and increases in intensity in response to experimental treatments.
DOI: 10.6084/m9.figshare.23696193.v1
title: <strong>Figure 7.</strong> <strong>Suppression of actin filament dynamics in response to acute NGF treatment blocks NGF-induced growth cone elaboration but does not affect the ATP/ADP ratio.</strong>

description: The growth cone was defined as the distal 10 microns of the axon shaft. If a growth cone exhibited lamellipodia then the distal most extent of the lamellipodium was taken as the distal most point on the growth cone, if not the distal most extent of the axon shaft was used as the defining distal point. Quantitative analysis of images was performed using Zeiss AxioVision software. The region of interest encompassing the growth cone was outlined and measurements of mean pixel fluorescence intensity in all relevant channels was determined for generation of ratios. For each channel, the mean intensity value obtained from the background of the image not containing any cells was subtracted from the mean intensity in the growth cone region of interest prior to determination of the ratio. Acquisition settings were chosen to generate maximum pixel values between 20-30% of the dynamic range to allow for detection of both decreases and increases in intensity in response to experimental treatments.
DOI: 10.6084/m9.figshare.23696064
title: Figure 8. Suppression of microtubule plus tip dynamic instability blocks actin filament dependent growth cone elaboration in response to acute NGF treatment but does not alter the ATP/ADP ratio.

description: The growth cone was defined as the distal 10 microns of the axon shaft. If a growth cone exhibited lamellipodia then the distal most extent of the lamellipodium was taken as the distal most point on the growth cone, if not the distal most extent of the axon shaft was used as the defining distal point. Quantitative analysis of images was performed using Zeiss AxioVision software. The region of interest encompassing the growth cone was outlined and measurements of mean pixel fluorescence intensity in all relevant channels was determined for generation of ratios. For each channel, the mean intensity value obtained from the background of the image not containing any cells was subtracted from the mean intensity in the growth cone region of interest prior to determination of the ratio. Acquisition settings were chosen to generate maximum pixel values between 20-30% of the dynamic range to allow for detection of both decreases and increases in intensity in response to experimental treatments.
DOI: 10.6084/m9.figshare.23696064.v1
title: Figure 8. Suppression of microtubule plus tip dynamic instability blocks actin filament dependent growth cone elaboration in response to acute NGF treatment but does not alter the ATP/ADP ratio.

description: The growth cone was defined as the distal 10 microns of the axon shaft. If a growth cone exhibited lamellipodia then the distal most extent of the lamellipodium was taken as the distal most point on the growth cone, if not the distal most extent of the axon shaft was used as the defining distal point. Quantitative analysis of images was performed using Zeiss AxioVision software. The region of interest encompassing the growth cone was outlined and measurements of mean pixel fluorescence intensity in all relevant channels was determined for generation of ratios. For each channel, the mean intensity value obtained from the background of the image not containing any cells was subtracted from the mean intensity in the growth cone region of interest prior to determination of the ratio. Acquisition settings were chosen to generate maximum pixel values between 20-30% of the dynamic range to allow for detection of both decreases and increases in intensity in response to experimental treatments.
DOI: 10.5281/zenodo.8155329
title: Primary X-ray diffraction data for the study "Femtosecond X-ray snapshots reveal correlated displacements of specific distal atoms in a protein crystal"

description: The data set contains the primary X-ray diffraction data collected at the FemtoMAX beamline from bovine trypsin crystals at room temperature (motor gony). Every image represents a 150 fs X-ray pulse diffracting on the crystal. The photon energy was 11.15 keV (ΔE/E = 0.01), approximately 1 × 10<sup>7</sup> photon/pulse. The images are stored in compressed numpy file format and the float pixels values describe energy in keV as generated by the time-over-threshold technique. The odd numbered images were recorded without a preceding THz pulse and the even numbered images were recorded after a single cycle THz pulse (2.1 THz peak, FWHM 2 THz) with approximately 50 ps delay. The data set also contain the laser delay associated with a rotation position (motor laserdelay, in seconds). Only one laser delay was recorded per step.
DOI: 10.5281/zenodo.5884553
title: Dataset for "Blue-shift photoconversion of near-infrared fluorescent proteins for labeling and tracking in living cells and organisms"

description: Dataset that supports the observation, characterization and application of the blue-shift photoconversion of the near infrared proteins, miRFPs, reported in the manuscript: "Blue-shift photoconversion of near-infrared fluorescent proteins for labeling and tracking in living cells and organisms". The data references to the specific figures and graphs in the manuscript.
DOI: 10.5281/zenodo.5884554
title: Dataset for "Blue-shift photoconversion of near-infrared fluorescent proteins for labeling and tracking in living cells and organisms"

description: Dataset that supports the observation, characterization and application of the blue-shift photoconversion of the near infrared proteins, miRFPs, reported in the manuscript: "Blue-shift photoconversion of near-infrared fluorescent proteins for labeling and tracking in living cells and organisms". The data references to the specific figures and graphs in the manuscript.
DOI: 10.5281/zenodo.8155328
title: Primary X-ray diffraction data for the study "Femtosecond X-ray snapshots reveal correlated displacements of specific distal atoms in a protein crystal"

description: The data set contains the primary X-ray diffraction data collected at the FemtoMAX beamline from bovine trypsin crystals at room temperature (motor gony). Every image represents a 150 fs X-ray pulse diffracting on the crystal. The photon energy was 11.15 keV (ΔE/E = 0.01), approximately 1 × 10<sup>7</sup> photon/pulse. The images are stored in compressed numpy file format and the float pixels values describe energy in keV as generated by the time-over-threshold technique. The odd numbered images were recorded without a preceding THz pulse and the even numbered images were recorded after a single cycle THz pulse (2.1 THz peak, FWHM 2 THz) with approximately 50 ps delay. The data set also contain the laser delay associated with a rotation position (motor laserdelay, in seconds). Only one laser delay was recorded per step.
DOI: 10.5281/zenodo.8156174
title: Dataset for "Blue-shift photoconversion of near-infrared fluorescent proteins for labeling and tracking in living cells and organisms"

description: Dataset that supports the observation, characterization and application of the blue-shift photoconversion of the near infrared proteins, miRFPs, reported in the manuscript: "Blue-shift photoconversion of near-infrared fluorescent proteins for labeling and tracking in living cells and organisms". The data references to the specific figures and graphs in the manuscript.
DOI: 10.25345/c5sf2mn77
title: MassIVE MSV000092457 - Metabolic and Proteomic Changes in Sickle Cell Disease and thalassemia Mouse Splenic and Hepatic Macrophages and Peripheral Blood Mononuclear cells
title: Sickle cell disease and Beta-thalassemia represent hemoglobinopathies arising from dysfunctional or under produced beta-globin chains, respectively. In both diseases, red blood cell injury and anemia are the impetus for end organ injury. Because persistent erythrophagocytosis is a hallmark of these genetic maladies it is critical to understand how macrophage phenotype polarizations in tissue compartments can inform on disease progression. Murine models of sickle cell disease and Beta-thalassemia allow for a basic understanding of mechanisms and provide for translation to human disease. A multi-omics approach to understanding macrophage metabolism and protein changes in two murine models of beta-globinopathy was performed on peripheral blood mononuclear cells as well as spleen and liver macrophages isolated from Berkley sickle cell disease (Berk-ss) and heterozygous B1/B2 globin gene deletion (Hbbth3/+) mice. Results from these experiments revealed the metabolome and proteome of macrophages are polarized to a distinct phenotype in Berk-ss and Hbbth3/+ compared each other and their common background mice (C57BL6/J). Further, spleen and liver macrophages revealed distinct disease specific phenotypes, suggesting macrophages become differentially polarized and reprogrammed within tissue compartments. We conclude that tissue recruitment, polarization, metabolic and proteomic reprogramming of macrophages in Berk-ss and Hbb mice may be relevant to disease to progression in other tissue.
DOI: 10.5281/zenodo.8143857
title: Modelos de avaliação de competências informacionais em contexto académico: Uma revisão sistemática da literatura: Análise dos dados

description: Análise dos dados referentes à dissertação de mestrado intitulada: Modelos de avaliação de competências informacionais em contexto académico: Uma revisão sistemática da literatura
DOI: 10.5281/zenodo.8143856
title: Modelos de avaliação de competências informacionais em contexto académico: Uma revisão sistemática da literatura: Análise dos dados

description: Análise dos dados referentes à dissertação de mestrado intitulada: Modelos de avaliação de competências informacionais em contexto académico: Uma revisão sistemática da literatura
DOI: 10.5281/zenodo.8156183
title: Modelos de avaliação de competências informacionais em contexto académico: Uma revisão sistemática da literatura: Análise dos dados

description: Análise dos dados referentes à dissertação de mestrado intitulada: Modelos de avaliação de competências informacionais em contexto académico: Uma revisão sistemática da literatura
DOI: 10.15482/usda.adc/1529217
title: Sodium Monitoring Dataset

description: The Agricultural Research Service of the US Department of Agriculture (USDA) in collaboration with other government agencies has a program to track changes in the sodium content of commercially processed and restaurant foods. This monitoring program includes these activities:

Tracking sodium levels of ~125 popular foods, called "Sentinel Foods," by periodically sampling them at stores and restaurants around the country, followed by laboratory analyses.
Tracking levels of "related" nutrients that could change when manufacturers reformulate their foods to reduce sodium; these related nutrients are potassium, total and saturated fat, total dietary fiber, and total sugar.
Sharing the results of these monitoring activities to the public periodically in the Sodium Monitoring Dataset and USDA National Nutrient Database for Standard Reference and once every two years in the Food and Nutrient Database for Dietary Studies.

The Sodium Monitoring Dataset is downloadable in Excel spreadsheet format.
DOI: 10.15482/usda.adc/1529218
title: USDA Agricultural Research Service- Patented Materials and Methods Technologies

description: Patented technologies on materials and methods that are available for licensing. Updated June 2018.
DOI: 10.15482/usda.adc/1529219
title: USDA Agricultural Research Service- Patented Animal Production and Protection Technologies

description: Recent USDA/ARS patented technologies on animal production and protection that are available for licensing are described, including summary, contact, benefits, and applications. Updated June 2018.
DOI: 10.3886/e192781
title: International entrepreneurship without investor protection - Economic History Review

description: We investigate the financing and performance of international entrepreneurship in an environment that was characterized by severe information problems and very weak investor protection. Despite these problems, new ventures could raise large amounts of equity and debt on the Belgian capital market between 1890 and 1914. Many of these firms were international new ventures (INVs) with their main operations abroad, often far away from Belgium. We find that INVs raised much more capital but were less likely to pay a dividend than domestic new ventures (DNVs). They were less likely to issue a bond and had a higher cost of debt when operating further away from Belgium. Performance after listing was generally bad for new ventures throughout the period, but it was much worse for INVs than for DNVs. Our findings confirm contemporary arguments that unprotected, financially illiterate investors were expropriated by INV founders. <br>