cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21130297.v1
title: Face processing M/EEG data for Dynamic Causal Modelling

description: This dataset consists of BIDS-formatted M/EEG data from Wakeman & Henson (2015) that have been processed for DCM analysis. Multimodal data from EEG, MEG magnetometers and MEG planar gradiometers from all 16 subjects have been processed with the analysis pipeline presented in Henson et al (2019). Individual subjects' T1 images were used for creating head models. Forward models (leadfields) for all subjects are included in the dataset. <br> Each subject's data consists of 3 files: SPM sidecar data file: maMceffdspmeeg_sub-XX_ses-meg_task-facerecognition_run-01_proc-sss_meg.dat SPM data header file: maMceffdspmeeg_sub-XX_ses-meg_task-facerecognition_run-01_proc-sss_meg.mat Gain matrix (forward model): SPMgainmatrix_maMceffdspmeeg_sub-XX_ses-meg_task-facerecognition_run-01_proc-sss_meg_1.mat *XX here indicates zero-padded subject number (01, 02, ...). Supplied filelist.txt contains the full filelist and folder hierarchy inside the compressed zip archive. <br> This dataset was prepared for demonstration of group-level estimation and inference of DCMs from M/EEG data. The raw data can be found here: https://openneuro.org/datasets/ds000117 <br> Scripts used to produce this dataset from the raw data, as well as as scripts demonstrating group DCM analysis can be found here: https://github.com/pranaysy/DCM-MEEG-Demo <br> For more information or queries, please get in touch, or open an issue on the GitHub repository linked above.
DOI: 10.6084/m9.figshare.21524397.v1
title: Gryllus bimaculatus genome sequence and gene annotation with neuropeptide

description: Gryllus bimaculatus genome sequence and GFF format annotation file with additional gene annotation for neuropeptides. The original draft genome sequence and gene annotations were obtained from https://gbimaculatusgenome.rc.fas.harvard.edu.
DOI: 10.6084/m9.figshare.25103501.v1
title: ASPLOS2024-FOCAL-AE.xlsx

description: This Excel sheet contains the data associated with "FOCAL: A First-Order Carbon Model to Assess Processor Sustainability" by L. Eeckhout published at the ACM International Conference on Architectural Support for Programming Languages and Operating Systems (ASPLOS), April 27 -- May 1, 2024.
DOI: 10.6084/m9.figshare.5442289.v1
title: Crop residue management : crop ans soil raw data (2010-2016)

description: Raw data from a field experiment on crop residue management in Gemblouw Agro-Bio Tech (ULg) experimental farm.<br>Latin square disposal of 4 contrasting treatments (CT-IN, CT-OUT, RT-IN, RT-OUT) where : <br>CT = conventional tillage (ploughing at 25cm)<br>RT = reduced tillage (at maximum 10 cm)<br>IN = incorporaiton of crop residues<br>OUT = exportation of crop residues<br>
DOI: 10.6084/m9.figshare.7387607.v1
title: Raw data for Fig.2a

description: All images captured for Fig. 2a.
DOI: 10.6084/m9.figshare.12307433.v1
title: Epicardial fat-secretome from heart failure

description: Proteomics. Released proteins of epicardial adipose tissue from patients with Heart Failure.
DOI: 10.6084/m9.figshare.12781142.v2
title: A database of refractive indices and dielectric constants auto-generated using ChemDataExtractor

description: An optical property database of refractive indices and dielectric constants is presented, which comprises a total of 49,076 refractive index and 60,804 dielectric constant data records on 11,054 unique chemicals. The database was auto-generated using the state-of-the-art natural language processing software, ChemDataExtractor, using a corpus of 388,461 scientific papers. The data repository offers a representative overview of the information on linear optical properties that resides in scientific papers from the past 30 years. The database has been prepared in three formats: SQL, JSON and CSV.
DOI: 10.6084/m9.figshare.21767699.v1
title: 3D reconstructions of reef-building corals (supplement data) - Part six

description: T.p is Turbinaria peltata, L.h isLobophyllia hemprichii, P.m is Pavona minuta.
DOI: 10.6084/m9.figshare.25406188.v1
title: Elsafty_RBCs_Slide_12

description: Each one of (Elsafty_RBCs_Slide_1-25) contains the field images/patches of a specific slide/patient. The names of the patches start with the respective slide/patient number, followed by the unique patch/field number. There is a total of 47,363 patches with 1076x535 pixels size from the 25 slides/patients, the counts of patches per slide/patient are as follows: 1690, 1709, 2697, 2400, 1905, 1803, 2964, 3049, 2464, 2080, 1894, 1852, 2590, 2263, 3328, 983, 1066, 935, 1131, 1237, 1874, 1393, 1277, 1199, and 1580.
DOI: 10.6084/m9.figshare.28934225.v1
title: ENSANUT Database

description: 2022 National Health and Nutrition Survey (ENSANUT), specifically the ENSADOL module, from which a sample of 5,676 adolescents aged 14 to 19 years was extracted. The variables selected for analysis were: <b>d0101</b>, which indicates the frequency of traditional cigarette use, and <b>d0107</b>, which refers to the frequency of e-cigarette use.
DOI: 10.17632/4pznttrd4h
title: Quantitative reconstruction of precipitation changes in the Iberian Peninsula during the Late Pleistocene and the Holocene

description: This is the data needed to create the Figures 1, 3, 4 and 5 and Table 2 in the manuscript. In version 2 we also provide altitude and landscape information for the modern training sites and the chronologies (Bchron posterior mean chronologies) and depths for the seven fossil pollen records. Ilvonen, L., López-Sáez, J. A., Holmström, L., Alba-Sánchez, F., Pérez-Díaz, S., Carrión, J. S., and Seppä, H.: Quantitative reconstruction of precipitation changes in the Iberian Peninsula during the Late Pleistocene and the Holocene, submitted to the Climate of the Past.
DOI: 10.6084/m9.figshare.21387459.v1
title: Do differences in cell lines and methods used for calculation of IC<sub>50</sub> values influence categorisation of drugs as P-glycoprotein substrates and inhibitors?

description: <i>In vitro</i> bidirectional assays are employed to determine whether a drug is a substrate and/or inhibitor of P-glycoprotein (P-gp) transport. Differences between cell lines and calculation methods can lead to variations in the determination of efflux ratios (ER) and IC<sub>50</sub> values used to classify a drug as a P-gp substrate and inhibitor, respectively.Information was collected from the literature on ER and IC<sub>50</sub> values with digoxin as the probe substrate using different cell lines and inhibition calculation methods. Predictive performance was evaluated by comparing [I<sub>gut</sub>]/IC<sub>50</sub> ratios versus reported <i>in vivo</i> results.For known P-gp substrates, 50% of the drugs had their highest ER value in MDCK-MDR1 cells while 81% had their lowest ER value in Caco-2 cells. For 30 drugs with inhibition data, lower mean IC<sub>50</sub> values were often observed with the Caco-2 cells and calculations based on ER. Based on the cut-off criteria of [I<sub>gut</sub>]/IC<sub>50</sub> ≥ 10, there were no significant differences in positive or negative predictive values based on either cell line or calculation method for the drugs.Within this limited dataset, differences between cell lines or IC<sub>50</sub> calculation methods do not seem to impact the prediction of <i>in vivo</i> P-gp inhibitor classification. <i>In vitro</i> bidirectional assays are employed to determine whether a drug is a substrate and/or inhibitor of P-glycoprotein (P-gp) transport. Differences between cell lines and calculation methods can lead to variations in the determination of efflux ratios (ER) and IC<sub>50</sub> values used to classify a drug as a P-gp substrate and inhibitor, respectively. Information was collected from the literature on ER and IC<sub>50</sub> values with digoxin as the probe substrate using different cell lines and inhibition calculation methods. Predictive performance was evaluated by comparing [I<sub>gut</sub>]/IC<sub>50</sub> ratios versus reported <i>in vivo</i> results. For known P-gp substrates, 50% of the drugs had their highest ER value in MDCK-MDR1 cells while 81% had their lowest ER value in Caco-2 cells. For 30 drugs with inhibition data, lower mean IC<sub>50</sub> values were often observed with the Caco-2 cells and calculations based on ER. Based on the cut-off criteria of [I<sub>gut</sub>]/IC<sub>50</sub> ≥ 10, there were no significant differences in positive or negative predictive values based on either cell line or calculation method for the drugs. Within this limited dataset, differences between cell lines or IC<sub>50</sub> calculation methods do not seem to impact the prediction of <i>in vivo</i> P-gp inhibitor classification.
DOI: 10.6084/m9.figshare.28930706.v1
title: Example Video : Finger tapping for bradykinesia detection

description: Example Video for finger tapping task for bradykinesia detection
DOI: 10.17632/rs5j2r8btf
title: Urdu Sing Language Recognition

description: This dataset contains hand landmark data collected using MediaPipe, focusing exclusively on the right hand. Each data point captures the 3D coordinates (x, y, z) of multiple predefined landmarks, providing precise spatial information for hand pose recognition and gesture analysis
DOI: 10.17632/vnsb4jgjgm
title: Data for: Simulation of non-stationary stochastic ground motions based on recent Italian earthquakes

description: The code allows to generate N non-stationary stochastic ground motions based on few input parameters: Magnitude, Distance, Vs30 and Style-of-Faulting.  The methodology is described in the cited reference. Two codes are provided, a Matlab Code and a Fortran code.

Reference:

Sabetta F, Pugliese A., Fiorentino G., Lanzano G., Luzi L. (2021) 
Simulation of non-stationary stochastic ground motions based on recent Italian earthquakes.
Bulletin of Earthquake Engineering.
DOI: 10.6084/m9.figshare.12905819.v1
title: Supplementary Material for: <b><i>JAK1</i></b> rs310241 and <b><i>JAK3</i></b> rs3008 Genotypes May Increase Susceptibility to Psoriasis: A Case Control Study

description: <b><i>Background:</i></b> Janus kinases (JAKs) are a family of non-receptor protein tyrosine kinases that are expressed in a variety of tissues. Several JAK-controlled cytokine receptor pathways are incriminated in the initiation and progression of psoriasis. Genetic polymorphisms influencing JAK expression would be anticipated to have a great impact on disease activity. <b><i>Objective:</i></b> The aim of the study was to evaluate the association between <i>JAK1</i> rs310241 and <i>JAK3</i> rs3008 polymorphisms and the risk of developing psoriasis. <b><i>Methods:</i></b> Blood samples of 150 patients and 120 controls were screened for nucleotide polymorphisms in <i>JAK1</i> rs310241 and <i>JAK3</i> rs3008 genes by using polymerase chain reaction<b> (</b>PCR)-restriction fragment length polymorphism technique. <b><i>Results:</i></b> The GG genotype of the <i>JAK1</i> rs310241 and <i>JAK3 rs3008</i> genes was significantly associated with an increase in psoriasis risk (<i>p</i> = 0.000, OR = 7.7, 95% CI = 2.8–21.5; <i>p</i> = 0.003, OR = 3.3, 95% CI = 1.5–6.9, respectively). The G allele of both genes was also associated with psoriasis susceptibility (<i>p</i> = 0.000, OR = 2.0, 95% CI = 1.4–2.8; <i>p</i> = 0.002, OR = 1.7, 95% CI = 1.2–2.4, respectively). <b><i>Conclusion:</i></b> The results indicate a possible association between <i>JAK1</i> rs310241 and <i>JAK3</i> rs3008 gene polymorphisms and susceptibility to psoriasis. These findings validate the importance of these molecules in psoriasis and may enable the identification of the individuals most susceptible to the disease.
DOI: 10.6084/m9.figshare.21941582.v1
title: Data.xlsx

description: CBR and UCS of cement stable red mud and geopolymer stable red mud
DOI: 10.6084/m9.figshare.25965613.v1
title: A Single-cell Atlas of Human Prostate Spatially Resolved Using Spatial Transcriptomics

description: The prostate is an organ with significant spatial heterogeneity. In an effort to elucidate its complex structure and cellular composition, we constructed a comprehensive single-cell atlas of the adult human prostate. Our high-resolution mapping identified 253,381 single cells and 34,876 nuclei, which were categorized into 126 unique subpopulations. This work has revealed not only various novel cell types in the human prostate but also their spatial localization. Importantly, we discovered four distinct acini, two of which were tightly associated with ETS-fusion-negative prostate cancer. Based on integration of spatial, single-cell, and bulk-seq analyses, we propose that two specific luminal cell types could serve as the common origins of prostate cancer. We also found evidence suggesting that zone-specific fibroblasts may contribute to the observed heterogeneity of luminal cells. This atlas will serve as a valuable reference for studying prostate biology and diseases such as prostate cancer.
DOI: 10.6084/m9.figshare.3120697.v6
title: De-identified DASS norms POV282

description: Data comprised of female partners of Australian combat veterans (N=282). <br>Identifying information has been removed including the "number of deployments".
DOI: 10.17632/ytz7pyg8y9
title: Calculation of price graphs reversal point, from average regression lines method

description: Calculation of price graphs reversal point, from average regression lines method
DOI: 10.6084/m9.figshare.14376512.v1
title: Table S5-Mineral chemistry.xlsx

description: Electron microprobe analyses of metamorphic minerals in the garnet amphibolites in the Wuwamen accretionary complex of the Chinese South Tianshan
DOI: 10.6084/m9.figshare.26947831.v1
title: US Products Dataset as of 9-5-2024

description: A list of products (beverages, chips, candy) encountered during Circularity Assessment Protocol (CAP) work in various cities in the United States from 2022 - 2024. Product name, quantity, mass of packaging (if applicable), manufacturer, and parent company are provided when available. Color codes identify missing data and data sources. This overall data set has not been fully QA/QC checked yet. Use at own risk.
DOI: 10.6084/m9.figshare.8204918.v1
title: spatialData_NumData_1000_neuron_scaled.mat

description: The dataset is the basis of our analysis of correlated gene expression (CGE) in the developing mouse brain.
DOI: 10.6084/m9.figshare.13138745.v1
title: Prevlance of pepetic ulcer disease.sav

description: incidence of bleeding peptic ulcer in syria
DOI: 10.6084/m9.figshare.26322220.v2
title: Supplementary Table 1_triploid_block_review.xlsx

description: The dataset focuses on the viability rate of triploid hybrids resulting from reciprocal interploidy crosses. This data plays a key role in my review article, where we explore the factors that may influence variations in triploid block strength across studies in angiosperms.
DOI: 10.6084/m9.figshare.27850320.v1
title: Interventions to Prevent Obesity in Children Aged 2-4 Years: Completed RoB2 Assessments

description: A Cochrane Review of Interventions (Diet and Activity) to Prevent Obesity in Children Aged 2-4 Years.
DOI: 10.6084/m9.figshare.3826431.v1
title: Correlation between an individual's shoe size and height

description: Hypothesis - There is a correlation between shoe size and height based on the proportion of the human body <br>Prediction - The taller the person, the bigger the shoe size <br>Methods - A random verbal survey was conducted in class. The heights and shoe size of 22 individuals were measured. Height was measure in foot and the shoe size was measured in inches. The equipment used to record the data was a laptop. <br><br><br>
DOI: 10.6084/m9.figshare.5668591.v1
title: Use of linkage to improve the completeness of the SIM and SINASC in the Brazilian capitals

description: ABSTRACT OBJECTIVE To analyze the contribution of linkage between databases of live births and infant mortality to improve the completeness of the variables common to the Mortality Information System (SIM) and the Live Birth Information System (SINASC) in Brazilian capitals in 2012. METHODS We studied 9,001 deaths of children under one year registered in the SIM in 2012 and 1,424,691 live births present in the SINASC in 2011 and 2012. The databases were related with linkage in two steps – deterministic and probabilistic. We calculated the percentage of incompleteness of the variables common to the SIM and SINASC before and after using the technique. RESULTS We could relate 90.8% of the deaths to their respective declarations of live birth, most of them paired deterministically. We found a higher percentage of pairs in Porto Alegre, Curitiba, and Campo Grande. In the capitals of the North region, the average of pairs was 84.2%; in the South region, this result reached 97.9%. The 11 variables common to the SIM and SINASC had 11,278 incomplete fields cumulatively, and we could recover 91.4% of the data after linkage. Before linkage, five variables presented excellent completeness in the SINASC in all Brazilian capitals, but only one variable had the same status in the SIM. After applying this technique, all 11 variables of the SINASC became excellent, while this occurred in seven variables of the SIM. The city of birth was significantly associated with the death component in the quality of the information. CONCLUSIONS Despite advances in the coverage and quality of the SIM and SINASC, problems in the completeness of the variables can still be identified, especially in the SIM. In this perspective, linkage can be used to qualify important information for the analysis of infant mortality.
DOI: 10.17632/mbrgjzbz5n
title: Road kill vertebrates southcentral Kansas 1980's

description: This study measured the frequency of vertebrates killed by vehicle collisions along stretch of two-lane highway in Kansas between 1985-1987. These data are the basis for a paper published in Transactions of Kansas Academy of Science, 2018, 121: 69-83. Data in columns record year, month and date (A, B, C), name of individual animal and group assigned (D and E), the location tenth mile section from specific intersections and segment number (F and G), adjacent land-use (agriculture, pasture, residential, woodland) on north, south or both sides (H, I and J), culvert (none, small or large) on one side or both (K and L), tree (none, one or more, hedgerow) on both sides of road (M and N), house (none, one or more than one) on both sides of road (O and P), intersection present or not (Q), water (R) and barn (S). The methodology led to high accuracy in number of animals found, a particular high mortality frequency for box turtles, snakes, rabbits and small rodents. The data stored here can be used for examining trends in wildlife road mortality at broader scales or overtime.
DOI: 10.6084/m9.figshare.20394165.v1
title: Travel demand for public transportation

description: This data includes travel demand by public transportation (buses, metros, and taxis) in Shenzhen. The collected data was from December 1, 2018, to December 31, 2018.
DOI: 10.6084/m9.figshare.24614958.v2
title: GRACE all data gap using Transformer method

description: Filling GRACE Data Gap Using an Innovative Transformer-Based Deep Learning ApproachWang, L., & Zhang, Y. (2024). Filling GRACE data gap using an innovative transformer-based deep learning approach. <i>Remote Sensing of Environment</i>, <i>315</i>, 114465. https://doi.org/10.1016/j.rse.2024.114465The source code in https://github.com/GISWLH/Transformer_GRACE
DOI: 10.6084/m9.figshare.8849159.v1
title: De novo genome assembly tutorial for ANGUS 2019

description: de novo assembly tutorial data modified for ANGUS 2019; corresponding to these lessons:<br>https://angus.readthedocs.io/en/2019/de-novo-genome-assembly.html<br><br>https://angus.readthedocs.io/en/2019/de-novo-genome-exploration.html<br>
DOI: 10.15468/dl.ej554q
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argentina silus (Ascanius, 1775)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((42.8012 -16.5547,42.4342 -16.6376,42.2188 -17.038,42.391 -17.4288,42.6657 -17.5533,43.0375 -17.4752,43.2579 -17.0968,43.0959 -16.69,42.8012 -16.5547))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013305-250525065834625/datasets/export for details.
DOI: 10.17632/fv28xxn4f3
title: UGV-NBWASTE: An Oriented Non-Biodegradable Waste Dataset in Bangladesh

description: UGV-NBWASTE: An Oriented Non-Biodegradable Waste Dataset in Bangladesh
DOI: 10.17632/ztv2nd42f9
title: An alternative tool for heart rate data processing in cattle

description: Contains raw heart rate data of beef grazing heifers as well as an R script to hard filter it
DOI: 10.6084/m9.figshare.20365869.v1
title: Supplementary Material for: Association between the Rostral Anterior Cingulate Cortex and Anterior Insula in the Salience Network on Response to Antidepressants in Major Depressive Disorder as Revealed by Isolated Effective Coherence

description: <b><i>Introduction:</i></b> Functional connectivity is attracting increasing attention for understanding the pathophysiology of depression and predicting the therapeutic efficacy of antidepressants. In this study, we evaluated effective connectivity using isolated effective coherence (iCoh), an effective functional connectivity analysis method developed from low-resolution brain electromagnetic tomography (LORETA) and estimated its practical usefulness for predicting the reaction to antidepressants in theta and alpha band iCoh values. <b><i>Methods:</i></b> We enrolled 25 participants from a depression treatment randomized study (the GUNDAM study) in which electroencephalography was performed before treatment. We conducted iCoh between the rostral anterior cingulate cortex (rACC) and anterior insula (AI), which are associated with the salience network. The patients were divided into responder and nonresponder groups at 4 weeks after the start of treatment, and iCoh values were compared between the two groups. Additionally, the sensitivity and specificity of iCoh were calculated using the receiver-operating characteristic (ROC) curve. <b><i>Results:</i></b> The Mann-Whitney U test showed significantly weaker connectivity flow from the rACC to the left AI in the alpha band in the responder group. The ROC curve for the connectivity flow from the rACC to the left AI in the alpha band showed 82% sensitivity and 86% specificity. <b><i>Discussion/Conclusion:</i></b> These findings suggest the pathological importance of effective connectivity flow from the rACC to the left AI in the alpha and theta bands and suggest its usefulness as a biomarker to distinguish responders to antidepressants.
DOI: 10.6084/m9.figshare.24078045.v1
title: Text prompts and videos generated using 5 popular Text-to-Video models plus quality metrics including user quality assessments

description: A collection of 201 prompts which are used to generate short-form videos using 5 popular text-to-video models namely Tune-a-Video, VideoFusion, Text-To-Vudeo Synthesis, Text2Video-Zero and Aphantasia. Each of the 1,005 generated videos is included along with automatically calculated quality metrics naturalness, text similarity between the original prompt and a generated text caption, and inception score, for each. Each video was rated by 24 different people and the data also includes the MOS scores for alignment between the generated videos and the original prompts, as well as for perception and overall quality of the video.Please cite this paper if using this dataset.