cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.cd22jf
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CatalogNumber is one of (UMMZI-00165543, UMMZI-00165544)",
 "Country is United States of America"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033769-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5xxvzr
title: Occurrence Download

description: A dataset containing 13071 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xyleborus monographus (J.C.Fabricius, 1792)"
 ]
}

 The dataset includes 13071 records from 247 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033768-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3626579_d1
title: Additional file 1: of 
                     Haemophilus influenzae: using comparative genomics to accurately identify a highly recombinogenic human pathogen

description: Haemophilus spp. genomes used in this study. (XLS 57 kb)
DOI: 10.6084/m9.figshare.c.3626660_d1
title: Additional file 1: of In vitro infectivity and differential gene expression of Leishmania infantum metacyclic promastigotes: negative selection with peanut agglutinin in culture versus isolation from the stomodeal valve of Phlebotomus perniciosus

description: Primers and TaqMan-MGB probes used for qRT-PCR validation and determination of differential expression in clones that represent more than one gene. Table S1. Sequences of qRT-PCR primers and probes. (XLS 33 kb)
DOI: 10.6084/m9.figshare.c.3626642_d4
title: Additional file 4: Table S1. of Revealing misassembled segments in the bovine reference genome by high resolution linkage disequilibrium scan

description: Full description of signatures of misassemblies and their estimated true location (XLSX 35 kb)
DOI: 10.6084/m9.figshare.c.3626699_d7
title: Additional file 2: of Conservation analysis of sequences flanking the testis-determining gene Sry in 17 mammalian species

description: Sry 5’ flanking sequences. Repeat-masked 10 kb sequences from 5’ ofSry. (TXT 149 kb)
DOI: 10.6084/m9.figshare.c.3626726_d2
title: Additional file 1: of High major histocompatibility complex class I polymorphism despite bottlenecks in wild and domesticated populations of the zebra finch (Taeniopygia guttata)

description: Sample name, origin and locus genotyped for each sample used in this study. (XLS 33 kb)
DOI: 10.6084/m9.figshare.c.3626699_d8
title: Additional file 3: of Conservation analysis of sequences flanking the testis-determining gene Sry in 17 mammalian species

description: Sry 3’ flanking sequences. Repeat-masked 10 kb sequences from 3’ of Sry. (TXT 146 kb)
DOI: 10.6084/m9.figshare.c.3626729_d2
title: Additional file 2: of Body condition scoring of Bornean banteng in logged forests

description: Body Condition Score data file. (CSV 3Â kb)
DOI: 10.6084/m9.figshare.c.3626780_d6
title: Additional file 5: Table S4. of Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR)

description: Results from QMDR association analysis of main effect filtered SNP-SNP models replicated in eMERGE dataset. Shown here are models that reached a permutation P-valueâ
DOI: 10.15468/dl.72kkts
title: Occurrence Download

description: A dataset containing 200 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "Geometry POLYGON ((-98.98333 21.63333, -98.65 21.63333, -98.65 21.85, -98.98333 21.85, -98.98333 21.63333))",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material citation)"
 ]
 }
 }
 ]
}

 The dataset includes 200 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033770-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3626945_d2
title: Additional file 3: Table S3. of A comprehensive study of the genomic differentiation between temperate Dent and Flint maize

description: Gene-wise statistics for 1407 candidate genes identified in the 70 Dent (N = 876) and 66 Flint (N = 545) lines based on genotyping data. (XLSX 1238 kb)
DOI: 10.6084/m9.figshare.c.3626957_d1
title: Additional file 7: of Functional conservation of the apoptotic machinery from coral to man: the diverse and complex Bcl-2 and caspase repertoires of Acropora millepora

description: Accession numbers of sequences used for the Bcl-2 and caspase phylogenies. (XLS 51 kb)
DOI: 10.6084/m9.figshare.c.3626945_d4
title: Additional file 4: Table S5. of A comprehensive study of the genomic differentiation between temperate Dent and Flint maize

description: Pathway assignment and information about candidates associated with the flowering network in maize. (XLSX 50 kb)
DOI: 10.6084/m9.figshare.c.3626945_d5
title: Additional file 7: Table S9. of A comprehensive study of the genomic differentiation between temperate Dent and Flint maize

description: Gene-wise level of differentiation of allele frequencies between landraces and Dent (left) and Flint (right) elite lines based on genotyping data. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.c.3626945_d6
title: Additional file 5: Table S6. of A comprehensive study of the genomic differentiation between temperate Dent and Flint maize

description: Genomic composition and flowering dates of 97 single-segment introgression library lines. (XLSX 114 kb)
DOI: 10.15468/dl.7zqat5
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Chinches semiacuáticas (Hemiptera: Heteroptera: Gerromorpha) del Parque Nacional Natural Utría (Chocó, Colombia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 67 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033771-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3626987_d3
title: Additional file 6: of Genome-wide target analysis of NEUROD2 provides new insights into regulation of cortical projection neuron migration and differentiation

description: In this file we provide the list of most significantly represented pathways among NEUROD2 target genes (http://david.abcc.ncifcrf.gov/home.jsp). (XLSX 7 kb)
DOI: 10.6084/m9.figshare.c.3626939_d14
title: MOESM4 of Setdb1-mediated H3K9 methylation is enriched on the inactive X and plays a role in its epigenetic silencing

description: Additional file 4. A retroviral shRNA library used to screen for genes involved in the maintenance of X inactivation. The genes targeted and the numbers of hairpins against each are shown. Dnmt1 [66,67] and Smchd1 [68] hairpins have been previously published.
DOI: 10.6084/m9.figshare.c.3626984_d5
title: Additional file 2: Table S1. of Analysis of transcripts differentially expressed between fruited and deflowered ‘Gala’ adult trees: a contribution to biennial bearing understanding in apple

description: List of genes and primers used for real-time quantitative PCR analyses. Table S2. Genomic position of the genetic markers of the ‘Starkrimson’ x ‘Granny Smith’ apple genetic map [35]. Table S3. Genomic position of the QTL related to biennial bearing using the ‘Starkrimson’ x ‘Granny Smith’ apple genetic map [25, 35]. Table S4. Significance of the effect estimated by ANOVA for each apple gene studied by qRT‐PCR. Table S5. Significance of the difference of relative expression between apple trees inhibiting flowering (‘ON’) and trees initiating flowering (‘OFF’) for each studied gene and at each date. Table S6. Number of genes, mean and standard error per group of genes with a differential expression at least one time of the three sampled dates. Table S7. Gene ontology (GO) categorization of genes differentially expressed in apical buds of apple trees inhibiting flowering (‘ON’) or initiating flowering (‘OFF’) at day 131 (A), 151 (B) and 222 (C). Table S8. List of apple genes showing significant differential expression at day 131 (A), 151 (B) and 222 (C). Table S9. Genomic position of the genes expressed differentially in apple trees inhibiting flowering (‘ON’) and trees initiating flowering (‘OFF’) on the ‘Golden Delicious’ genome. Table S10. List of genes showing significant differential expression between apple trees inhibiting flowering (‘ON’) and trees initiating flowering (‘OFF’) at least one of the three dates of the experiment and located within QTL intervals for traits related to biennial bearing using the ‘Starkrimson’ x ‘Granny Smith’ genetic map [25, 35]. (XLS 1000 kb)
DOI: 10.15468/dl.m3e66f
title: Occurrence Download

description: A dataset containing 2453 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Choristoneura fumiferana (Clemens, 1865)"
 ]
}

 The dataset includes 2453 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033772-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3627209_d1
title: Additional file 1: of Inferring active regulatory networks from gene expression data using a combination of prior knowledge and enrichment analysis

description: Human Test case results. Additional file 1 is a folder containing the detailed results of the Human Test case in HTML format. Each file includes the respective calculated enrichments for TFs, miRNAs, KEGG pathways, KEGG pathway categories and GO terms. In order to view the results a standard web-browser is needed (Chrome and Mozilla Firefox have been tested). The HTML must be opened from inside the folder because additional files (images and javascripts) which are needed for the correct view of the results are included. (ZIP 90 kb)
DOI: 10.6084/m9.figshare.c.3627182_d6
title: Additional file 13: of Stringent comparative sequence analysis reveals SOX10 as a putative inhibitor of glial cell differentiation

description: DNase-seq peaks identified in S16 cells from experimental sample 2 that have an F-Seq score of at least 0.08. The data are provided as a UCSC Rat Genome Browser (rn5) custom track and the fourth column (‘name’) shows the F-Seq score for the peak. (TXT 1075 kb)
DOI: 10.6084/m9.figshare.c.3627209_d2
title: Additional file 2: of Inferring active regulatory networks from gene expression data using a combination of prior knowledge and enrichment analysis

description: Mouse Test case results. Additional file 2 is a folder containing the detailed results of the Mouse Test case in HTML format. Each file includes the respective calculated enrichments for TFs, miRNAs, KEGG pathways, KEGG pathway categories and GO terms. In order to view the results a standard web-browser is needed (Chrome and Mozilla Firefox have been tested). The HTML files must be opened from inside the folder because additional files (images and javascripts) which are needed for the correct view of the results are included. (ZIP 83 kb)
DOI: 10.6084/m9.figshare.c.3627182_d9
title: Additional file 2: of Stringent comparative sequence analysis reveals SOX10 as a putative inhibitor of glial cell differentiation

description: Dimeric SOX10 consensus sequences with an intervening sequence of five to 10 base pairs in the human genome provided as a UCSC Human Genome Browser (hg18) custom track. The fourth column (‘name’) shows the predicted SOX10 binding site sequence. (TXT 22732 kb)
DOI: 10.6084/m9.figshare.c.3627242_d6
title: MOESM9 of What evidence exists on the impact of governance type on the conservation effectiveness of forest protected areas? Knowledge base and evidence gaps

description: Additional file 9. Systematic map database.
DOI: 10.6084/m9.figshare.c.3627248_d4
title: Additional file 2: Table S1. of Within-pair differences of DNA methylation levels between monozygotic twins are different between male and female pairs

description: Rank order within-pair differences in methylation levels (WPDMs) of CpG islands in older male and female pairs (in descending order). (XLSX 2065 kb)
DOI: 10.15468/dl.s9hgex
title: Occurrence Download

description: A dataset containing 577 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Insecta",
 "Geometry POLYGON ((-98.98333 21.63333, -98.65 21.63333, -98.65 21.85, -98.98333 21.85, -98.98333 21.63333))",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material citation)"
 ]
 }
 }
 ]
}

 The dataset includes 577 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033774-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3627302_d4
title: Additional file 4: Table S3. of Infectious hematopoietic necrosis virus (IHNV) persistence in Sockeye Salmon: influence on brain transcriptome and subsequent response to the viral mimic poly(I:C)

description: Fold change (FC ≤ 1.5) list and GO enrichment analysis of probes affected by poly(I:C)-injection.
DOI: 10.5281/zenodo.14452913
title: ИНСУЛИНОТЕРАПИЯ У БОЛЬНЫХ С САХАРНЫМ ДИАБЕТОМ 2-ТИПА ПРИ COVID-19  И ЕЕ ВЗАИМОСВЯЗЬ С НЕБЛАГОПРИЯТНЫМИ ИСХОДАМИ

description: У пациентов с сахарным диабетом во время новой ковидной инфекции и после нее наблюдается резкие колебания уровня глюкозы крови. Причиной гипергликемии может быть повышение потребности клеток в инсулине-такая ситуация возможна при любой вирусной и бактериальной инфекции, в том числе при COVID-19. Более опасная причина повышения сахара крови-прямое или опосредованное повреждение клеток поджелудочной железы коронавирусными инфекциями.
DOI: 10.5281/zenodo.14452914
title: ИНСУЛИНОТЕРАПИЯ У БОЛЬНЫХ С САХАРНЫМ ДИАБЕТОМ 2-ТИПА ПРИ COVID-19  И ЕЕ ВЗАИМОСВЯЗЬ С НЕБЛАГОПРИЯТНЫМИ ИСХОДАМИ

description: У пациентов с сахарным диабетом во время новой ковидной инфекции и после нее наблюдается резкие колебания уровня глюкозы крови. Причиной гипергликемии может быть повышение потребности клеток в инсулине-такая ситуация возможна при любой вирусной и бактериальной инфекции, в том числе при COVID-19. Более опасная причина повышения сахара крови-прямое или опосредованное повреждение клеток поджелудочной железы коронавирусными инфекциями.
DOI: 10.6084/m9.figshare.c.3627374_d2
title: Additional file 2: of Long genes and genes with multiple splice variants are enriched in pathways linked to cancer and other multigenic diseases

description: The calculated lengths (nt) of all the mRNA-coding nuclear transcripts (GRCh37) along with the number of exons, introns and their length fractions. The file is in the comma-separated CSV format. (CSV 2851 kb)
DOI: 10.6084/m9.figshare.c.3627476_d4
title: Additional file 3: Table S1. of DNA methylation and smoking in Korean adults: epigenome-wide association study

description: Epigenome-wide association results of current smoking (compared to never smoking). (XLSX 30455Â kb)
DOI: 10.15468/dl.3gj5vn
title: Occurrence Download

description: A dataset containing 3150 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hydrochoerus hydrochaeris (Linnaeus, 1766)"
 ]
}

 The dataset includes 3150 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033775-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3627560_d3
title: Additional file 3: Table S2 of Widespread RNA binding by chromatin-associated proteins

description: Gene clustersâ   functional annotations. (XLSX 1364 kb)
DOI: 10.6084/m9.figshare.c.3627569_d2
title: Additional file 1: of Detecting false positive sequence homology: a machine learning approach

description: Summary of OD_S RNA-seq libraries. (XLSX 44 kb)
DOI: 10.6084/m9.figshare.c.3627593_d3
title: Additional file 2: of Patterns of livestock activity on heterogeneous subalpine pastures reveal distinct responses to spatial autocorrelation, environment and management

description: Contains the dataset of study area A. (TXT 184 kb)
DOI: 10.6084/m9.figshare.c.3627641_d1
title: Additional file 1: of Current distribution of the invasive mosquito species, Aedes koreicus [Hulecoeteomyia koreica] in northern Italy

description: List of municipalities currently positive (July 2015) for Aedes koreicus and Aedes albopictus in northern Italy. (XLS 47Â kb)
DOI: 10.6084/m9.figshare.c.3627653_d1
title: Additional file 10: of LRR-RLK family from two Citrus species: genome-wide identification and evolutionary aspects

description: Statistics of the tandem duplicated paralogues from C. sinensis LRR-XII. Comparative data generated by Blastp using all C. sinensis LRR-XII. (XLSX 12 kb)
DOI: 10.34740/kaggle/dsv/10193522
title: shopee app reviews from google play store
DOI: 10.15468/dl.c54cb6
title: Occurrence Download

description: A dataset containing 577 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Insecta",
 "Geometry POLYGON ((-98.98333 21.63333, -98.65 21.63333, -98.65 21.85, -98.98333 21.85, -98.98333 21.63333))",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material citation)"
 ]
 }
 }
 ]
}

 The dataset includes 577 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033777-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3627653_d4
title: Additional file 9: of LRR-RLK family from two Citrus species: genome-wide identification and evolutionary aspects

description: Statistics of the tandem duplicated paralogues sequences from C. clementina LRR-XII. Comparative data generated by Blastp using all C. clementina LRR-XII. (XLSX 13 kb)
DOI: 10.48366/r789913
title: High-Resolution Hyperspectral Mapping: From Vegetation Biodiversity to Urban Land Classification

description: his collection explores the powerful applications of hyperspectral remote sensing for high-resolution mapping of vegetation biodiversity, urban land classification, and crop type detection. It includes studies utilizing advanced techniques like convolutional autoencoders and convolutional neural networks (CNNs), along with evaluations of PRISMA and AVIRIS-NG hyperspectral data for environmental monitoring and land use analysis. These studies offer valuable methodologies for researchers, remote sensing professionals, and students to enhance land management, ecological studies, and precision agriculture through the use of high-resolution hyperspectral imagery.
DOI: 10.6084/m9.figshare.c.3627707_d1
title: Additional file 1: of Using hybridization networks to retrace the evolution of Indo-European languages

description: Biolinguistic IE data archive. This file includes phonetic data, data matrices, Newick strings and word trees discussed in this paper as well as Perl and Python scripts for computing the Levenshtein and SCA distances. (ZIP 328Â kb)
DOI: 10.6084/m9.figshare.c.3627698_d2
title: Additional file 8: of Transcriptomic responses of the basidiomycete yeast Sporobolomyces sp. to the mycotoxin patulin

description: Combined table of cuffdiff, Blast2GO and BLASTx outputs for downregulated Sporobolomyces sp. DEGs (FDR
DOI: 10.6084/m9.figshare.c.3627653_d9
title: Additional file 12: of LRR-RLK family from two Citrus species: genome-wide identification and evolutionary aspects

description: Syntenic blocks (SBs) of LRR-XII from C. sinensis and C. clementina. SBs were obtained from genome collinearity and independent homology analysis. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.c.3627653_d10
title: Additional file 13: of LRR-RLK family from two Citrus species: genome-wide identification and evolutionary aspects

description: Amino acid sequences of human kinase proteins. Sequences used as outgroup in the phylogenetic analysis with Citrus and Arabidopsis LRR-RLKs. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3627698_d4
title: Additional file 9: of Transcriptomic responses of the basidiomycete yeast Sporobolomyces sp. to the mycotoxin patulin

description: Combined table of cuffdiff, Blast2GO and BLASTx outputs for Sporobolomyces sp. genes detected only in the presence of 5 μg/ml of PAT. DEGs have been sorted for FPKM expression values (from the highest to the lowest), and those with FPKM lower than 1.5 were discarded. BLASTx results with existing Sporobolomyces sp. genome annotation were useful to identify new genes detected in the present study, while BLASTx against SGD was necessary to identify Sporobolomyces sp. orthologs in yeast and to assign gene names accordingly; low homology (i.e. E-values positive or higher than 1E-3) was reported as NA, indicating that no S. cerevisiae orthologs of Sporobolomyces sp. DEGs were found. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3627719_d1
title: Additional file 1: of Analysis of a spatial gene expression database for sea anemone Nematostella vectensis during early development

description: MATLAB files of standardized gene expression profiles derived from stored in situ hybridizations. The profiles are provided both as separate numerical arrays in labeled .mat files and as a two-column array of cells in the file “allarrs.mat”. For the separate arrays, the labels are the filenames; for the array of cells, the labels are the character arrays in the first column. The labels include the gene name, the developmental stage and, if applicable, the sequence number. For example, the file “admp-relatedbla1.mat” contains the variable “profile”, which is a 1×100 numerical array from the first image during the blastula of admp-related. This numerical array is also located in the second column of the 252×2 cell array called “expressiondata” in the file “allarrs.mat”, behind character array “admp-relatedbla1” in the first column. (cle = cleavage, bla = blastula, ega = early gastrula, mga = mid gastrula, lga = late gastrula, epl = early planula, pla = planula, lpl = late planula). The cell array has been converted to comma separated table “expressiontable.txt”, to be processed outside MATLAB and in modified MATLAB releases. The text file has been produced with the script “exportexpression.m” and can be restored to cell array “expressiondata0” in file “allarrs0.mat” with the script “importexpression.m”. (RAR 230 kb)
DOI: 10.6084/m9.figshare.c.3627653_d11
title: Additional file 11: of LRR-RLK family from two Citrus species: genome-wide identification and evolutionary aspects

description: List of C. clementina and C. sinensis LRR-XII localized in cluster region. The chromosome distance of 200 kb was used as a reference to include the LRR-XII genes in the same cluster region. (XLSX 12 kb)