cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8367158
title: SCTrans: Scenario Dataset for Simulation Testing of Autonomous Driving Systems

description: In this work, we introduce a transformation-based approach, namely SCTrans, which utilizes existing real-world traffic scenario datasets to create simulation scenario files. For more approach details, please see our ICSE-24 paper.
To curate an initial version of our scenario dataset, we randomly selected 1,994 valid traffic scenario recording files as data sources, from representative traffic scenario datasets, including CommonRoad[1], inD[2], and highD[3]. Finally, we got 1,994 simulation scenario files and 426 map description files, which are compatible with advanced ADS testing platforms (e.g., LGSVL[4]+Apollo[5] and Carla[6]+Autoware[7]. For ease of using our scenarios, we provide scenario-runner scripts for LGSVL and Carla, available at our Github Repo[8]. Besides, for ease of scenario selection, we manually label all our simulation scenarios according to ISO 21448 (i.e., guiding principles for ADS SOTIF testing). The labeling results are listed in scenario-tag.xlsx.
To obtain access to this dataset, please read our open-source policy (i.e., conditions of restricted access to this repo).
======== How to Use ========
Please refer to our Github Website. We provide the refined versions of the LGSVL & Carla scenario runners. The scenario-runner directory contains the complete, modified source code along with comprehensive usage instructions.
DOI: 10.25582/data.2023-02.2750284/2314796
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750345/2314797
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750358/2314798
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750339/2314799
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750618/2314800
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750609/2314801
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750266/2314802
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750551/2314803
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750402/2314804
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750340/2314805
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750419/2314806
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750408/2314807
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750608/2314808
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750295/2314809
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750346/2314810
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750585/2314811
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750760/2314812
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750386/2314813
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750481/2314814
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750418/2314815
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750325/2314816
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750620/2314817
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750248/2314818
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750510/2314819
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750486/2314820
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750185/2314821
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750555/2314822
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750327/2314823
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750491/2314824
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750314/2314825
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750260/2314826
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750265/2314827
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750403/2314828
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750292/2314829
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750112/2314830
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750425/2314831
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750437/2314832
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750483/2314833
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750350/2314834
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750463/2314835
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750579/2314836
title: Data for EMSL Project 50407 from February 2023
DOI: 10.5519/qd.mq0lrzo2
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (296 records)
DOI: 10.25582/data.2023-02.2750278/2314837
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750264/2314838
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750315/2314839
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750460/2314840
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.25303381
title: <b>Appendix: </b><b>RESULT and EXPLANATION</b>

description: This appendix includes tables and statistics data of the article entitled "<b>AI in Teaching: A Catalyst for Teacher Professional Development?</b>"
DOI: 10.25582/data.2023-02.2750472/2314841
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750114/2314842
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750210/2314843
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750511/2314844
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.13545125
title: Additional file 9 of DNA methylation and lipid metabolism: an EWAS of 226 metabolic measures

description: Additional file 9: Table S5. Results of the EWAS of metabolite measure principal components. Presented are the statistically significant (Bonferroni-adjusted P &lt; 1.34e−8) results of the EWAS of the first 8 principal components of the metabolite measures data in the discovery cohort KORA F4. CHR: annotated chromosome of the CpG site; Pos: annotated chromosomal position of the CpG site; Coef: coefficient of the CpG site in the regression model; SE: standard error of the coefficient; P: p value; PC_explained_var: Explained variance of the metabolite principal component.
DOI: 10.25582/data.2023-02.2750496/2314845
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750246/2314846
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750554/2314847
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.9350939
title: MOESM2 of DLIGAND2: an improved knowledge-based energy function for proteinâ ligand interactions using the distance-scaled, finite, ideal-gas reference state

description: Additional file 2: Table S2. It contained the list of the 4044 complexes collected from PDBind refined data set.
DOI: 10.25582/data.2023-02.2750525/2314848
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.9350939.v1
title: MOESM2 of DLIGAND2: an improved knowledge-based energy function for proteinâ ligand interactions using the distance-scaled, finite, ideal-gas reference state

description: Additional file 2: Table S2. It contained the list of the 4044 complexes collected from PDBind refined data set.
DOI: 10.25582/data.2023-02.2750543/2314849
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750445/2314850
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750254/2314851
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.9350948
title: MOESM3 of DLIGAND2: an improved knowledge-based energy function for proteinâ ligand interactions using the distance-scaled, finite, ideal-gas reference state

description: Additional file 3: Table S3. The EF1% values of four scoring functions on DEKOIS 2.0 data set are shown.
DOI: 10.25582/data.2023-02.2750359/2314852
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.9350948.v1
title: MOESM3 of DLIGAND2: an improved knowledge-based energy function for proteinâ ligand interactions using the distance-scaled, finite, ideal-gas reference state

description: Additional file 3: Table S3. The EF1% values of four scoring functions on DEKOIS 2.0 data set are shown.
DOI: 10.25582/data.2023-02.2750370/2314853
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750502/2314854
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750213/2314855
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750451/2314856
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.9350951
title: MOESM4 of DLIGAND2: an improved knowledge-based energy function for proteinâ ligand interactions using the distance-scaled, finite, ideal-gas reference state

description: Additional file 4: Table S4. The logAUC and EF (1%, 5% and 10%) values of six scoring functions on the DUD-E dataset are listed.
DOI: 10.25582/data.2023-02.2750361/2314857
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.9350951.v1
title: MOESM4 of DLIGAND2: an improved knowledge-based energy function for proteinâ ligand interactions using the distance-scaled, finite, ideal-gas reference state

description: Additional file 4: Table S4. The logAUC and EF (1%, 5% and 10%) values of six scoring functions on the DUD-E dataset are listed.
DOI: 10.25582/data.2023-02.2750514/2314858
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2752223/2314859
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750388/2314860
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750312/2314861
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.11972403
title: Additional file 2 of Endogenous circadian time genes expressions in the liver of mice under constant darkness

description: Additional file 2. Oscillation genes under LD. RNA-Seq data of LD was subjected to MetaCycle to screen oscillation genes.
DOI: 10.25582/data.2023-02.2750407/2314862
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750189/2314863
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750253/2314864
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.13545253
title: Additional file 1 of Combination of lyophilized adipose-derived stem cell concentrated conditioned medium and polysaccharide hydrogel in the inhibition of hypertrophic scarring

description: Additional file 1: Figure S1. The graphical abstract of ADSCC-CM combined with polysaccharide hydrogel: The concentration of therapeutic cytokines in stem cell-conditioned medium was elevated by lyophilization and rehydration. Simultaneously, the ionic molecules in the conditioned medium helped connect the short nanofibers in the polysaccharide hydrogel, forming a semi-solid drug reservoir for scarring’s remission. Figure S2. Freeze-drying of ADSC-CM: (A)Complete lyophilization of ADSC-CM in the tested volume of 10 ml and 15 ml. (B) Comparison of the ADSC-CM weight before and after freeze-drying.
DOI: 10.6084/m9.figshare.13545253.v1
title: Additional file 1 of Combination of lyophilized adipose-derived stem cell concentrated conditioned medium and polysaccharide hydrogel in the inhibition of hypertrophic scarring

description: Additional file 1: Figure S1. The graphical abstract of ADSCC-CM combined with polysaccharide hydrogel: The concentration of therapeutic cytokines in stem cell-conditioned medium was elevated by lyophilization and rehydration. Simultaneously, the ionic molecules in the conditioned medium helped connect the short nanofibers in the polysaccharide hydrogel, forming a semi-solid drug reservoir for scarring’s remission. Figure S2. Freeze-drying of ADSC-CM: (A)Complete lyophilization of ADSC-CM in the tested volume of 10 ml and 15 ml. (B) Comparison of the ADSC-CM weight before and after freeze-drying.
DOI: 10.25582/data.2023-02.2750222/2314865
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.13545256
title: Additional file 2 of Combination of lyophilized adipose-derived stem cell concentrated conditioned medium and polysaccharide hydrogel in the inhibition of hypertrophic scarring

description: Additional file 2: Table S1-2. Shotgun LC-MS/MS analysis of ADSC-CM: The protein solution separated by SDS-PAGE were digested into peptide mixtures, which can be matched in the corresponding database. Through the assembling of the complete series of each protein in the mix, each protein was identified.
DOI: 10.25582/data.2023-02.2750759/2314866
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.13545125.v1
title: Additional file 9 of DNA methylation and lipid metabolism: an EWAS of 226 metabolic measures

description: Additional file 9: Table S5. Results of the EWAS of metabolite measure principal components. Presented are the statistically significant (Bonferroni-adjusted P &lt; 1.34e−8) results of the EWAS of the first 8 principal components of the metabolite measures data in the discovery cohort KORA F4. CHR: annotated chromosome of the CpG site; Pos: annotated chromosomal position of the CpG site; Coef: coefficient of the CpG site in the regression model; SE: standard error of the coefficient; P: p value; PC_explained_var: Explained variance of the metabolite principal component.
DOI: 10.6084/m9.figshare.13545256.v1
title: Additional file 2 of Combination of lyophilized adipose-derived stem cell concentrated conditioned medium and polysaccharide hydrogel in the inhibition of hypertrophic scarring

description: Additional file 2: Table S1-2. Shotgun LC-MS/MS analysis of ADSC-CM: The protein solution separated by SDS-PAGE were digested into peptide mixtures, which can be matched in the corresponding database. Through the assembling of the complete series of each protein in the mix, each protein was identified.
DOI: 10.25582/data.2023-02.2750538/2314867
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750384/2314868
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750362/2314869
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750501/2314870
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750573/2314871
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750436/2314872
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.11972397
title: Additional file 1 of Endogenous circadian time genes expressions in the liver of mice under constant darkness

description: Additional file 1. Oscillation genes under L-DD. RNA-Seq data of L-DD was subjected to MetaCycle to screen oscillation genes.
DOI: 10.6084/m9.figshare.11972397.v1
title: Additional file 1 of Endogenous circadian time genes expressions in the liver of mice under constant darkness

description: Additional file 1. Oscillation genes under L-DD. RNA-Seq data of L-DD was subjected to MetaCycle to screen oscillation genes.
DOI: 10.25582/data.2023-02.2750443/2314873
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.17739602
title: Targeted deep sequencing reveals <i>APC</i> mutations as predictors of overall survival in Chinese colorectal patients receiving adjuvant chemotherapy

description: <b>Objective:</b> Targeted deep sequencing was used to characterize the mutational spectrum of <i>APC</i> in Chinese colorectal tumors in comparison to that in Caucasians from The Cancer Genome Atlas (TCGA) and to investigate whether <i>APC</i> mutations can predict overall survival in CRC patients receiving adjuvant chemotherapy. <b>Methods:</b> A total of 315 Chinese CRC patients including 241 stage II/III patients receiving fluorouracil-based adjuvant chemotherapy were included in this study. Next generation sequencing was carried out to detect somatic mutations on all <i>APC</i> exons. The associations between <i>APC</i> mutations and overall survival were determined by the Cox proportional hazards model. <b>Results:</b><i>APC</i> was mutated in 221 of 315 colorectal tumors (70.2%). Chinese CRC had a much higher frequency of missense mutations (16.2% vs. 2.4%), but a lower frequency of nonsense (41.0% vs. 54.2%) and frameshift mutations (10.5% vs. 18.4%) than Caucasian CRC. Among stage II/III patients receiving fluorouracil-based adjuvant chemotherapy, <i>APC</i> mutations showed a significant association with worse survival (HR = 1.69; 95% CI, 1.10-2.62; <i>p</i> = .0179). Of the mutation types, frameshift mutations conferred the highest risk of death (HR = 2.88; 95% CI, 1.54-5.37; <i>p</i> =.0009). Among individual mutation sites, Arg232Ter, the most frequent mutation in Chinese CRC, exhibited the strongest negative impact on survival (HR = 2.65; 95% CI, 1.16-6.03; <i>p</i> =.0202). <b>Conclusion:</b><i>APC</i> overall mutation was an independent predictor for overall survival of stage II/III CRC patients receiving fluorouracil-based chemotherapy.
DOI: 10.6084/m9.figshare.11972403.v1
title: Additional file 2 of Endogenous circadian time genes expressions in the liver of mice under constant darkness

description: Additional file 2. Oscillation genes under LD. RNA-Seq data of LD was subjected to MetaCycle to screen oscillation genes.
DOI: 10.6084/m9.figshare.17739602.v1
title: Targeted deep sequencing reveals <i>APC</i> mutations as predictors of overall survival in Chinese colorectal patients receiving adjuvant chemotherapy

description: <b>Objective:</b> Targeted deep sequencing was used to characterize the mutational spectrum of <i>APC</i> in Chinese colorectal tumors in comparison to that in Caucasians from The Cancer Genome Atlas (TCGA) and to investigate whether <i>APC</i> mutations can predict overall survival in CRC patients receiving adjuvant chemotherapy. <b>Methods:</b> A total of 315 Chinese CRC patients including 241 stage II/III patients receiving fluorouracil-based adjuvant chemotherapy were included in this study. Next generation sequencing was carried out to detect somatic mutations on all <i>APC</i> exons. The associations between <i>APC</i> mutations and overall survival were determined by the Cox proportional hazards model. <b>Results:</b><i>APC</i> was mutated in 221 of 315 colorectal tumors (70.2%). Chinese CRC had a much higher frequency of missense mutations (16.2% vs. 2.4%), but a lower frequency of nonsense (41.0% vs. 54.2%) and frameshift mutations (10.5% vs. 18.4%) than Caucasian CRC. Among stage II/III patients receiving fluorouracil-based adjuvant chemotherapy, <i>APC</i> mutations showed a significant association with worse survival (HR = 1.69; 95% CI, 1.10-2.62; <i>p</i> = .0179). Of the mutation types, frameshift mutations conferred the highest risk of death (HR = 2.88; 95% CI, 1.54-5.37; <i>p</i> =.0009). Among individual mutation sites, Arg232Ter, the most frequent mutation in Chinese CRC, exhibited the strongest negative impact on survival (HR = 2.65; 95% CI, 1.16-6.03; <i>p</i> =.0202). <b>Conclusion:</b><i>APC</i> overall mutation was an independent predictor for overall survival of stage II/III CRC patients receiving fluorouracil-based chemotherapy.
DOI: 10.25582/data.2023-02.2750556/2314874
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.11972409
title: Additional file 3 of Endogenous circadian time genes expressions in the liver of mice under constant darkness

description: Additional file 3. Oscillation genes under S-DD. RNA-Seq data of S-DD was subjected to MetaCycle to screen oscillation genes.
DOI: 10.6084/m9.figshare.11972409.v1
title: Additional file 3 of Endogenous circadian time genes expressions in the liver of mice under constant darkness

description: Additional file 3. Oscillation genes under S-DD. RNA-Seq data of S-DD was subjected to MetaCycle to screen oscillation genes.
DOI: 10.25582/data.2023-02.2750559/2314875
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750367/2314876
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750444/2314877
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.13545284
title: Additional file 1 of Direct detection of Corynebacterium striatum, Corynebacterium propinquum, and Corynebacterium simulans in sputum samples by high-resolution melt curve analysis

description: Additional file 1. Bacterial strains used in this study.
DOI: 10.6084/m9.figshare.13545284.v1
title: Additional file 1 of Direct detection of Corynebacterium striatum, Corynebacterium propinquum, and Corynebacterium simulans in sputum samples by high-resolution melt curve analysis

description: Additional file 1. Bacterial strains used in this study.
DOI: 10.25582/data.2023-02.2750199/2314878
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750610/2314879
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750504/2314880
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750276/2314881
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750293/2314882
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2752222/2314883
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750500/2314884
title: Data for EMSL Project 50407 from February 2023
DOI: 10.25582/data.2023-02.2750535/2314885
title: Data for EMSL Project 50407 from February 2023
DOI: 10.6084/m9.figshare.11972475
title: Additional file 1 of RapidAIM: a culture- and metaproteomics-based Rapid Assay of Individual Microbiome responses to drugs

description: Additional file 1: Table S1. Information of 43 tested compounds. Table S2. Significantly shifted species under drug treatment (one-sided Wilcoxon rank sum test, FDR-adjusted p &lt; 0.05).
DOI: 10.15468/dl.47ybxc
title: Occurrence Download

description: A dataset containing 765593 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Xeno-canto - Bird sounds from around the world"
 ]
}

 The dataset includes 765593 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022215-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.