cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/pyx62v29h3.1
title: Data for - "Lugar de mulher é...na política: Reflexões sobre micro e macroagressões de identidades" published by RAC-Revista de Administração Contemporânea

description: Este arquivo contém os dados qualitativos utilizados no artigo intitulado "Lugar de mulher é...na política: Reflexões sobre micro e macroagressões de identidades".
DOI: 10.17632/5v37wxxd2d.1
title: nitrogen dioxide concentrations in Tandil city

description: Tables with all the absorbance values (given by the spectrophotometer), C concentration (obtained with the calibration curve), exposure time and atmospheric concentration of NO2 corresponding to sampling period.
DOI: 10.17632/mrrjjp4j2w.1
title: Wood cookstove use is associated with gastric cancer in Central America, modified by the CYP1B1 genotype rs1800440, and independent of H. pylori cagA serostatus

description: Wood cookstove use is associated with gastric cancer in Central America, modified by the CYP1B1 genotype rs1800440, and independent of H. pylori cagA serostatus.

We conducted a population-based, case-control study (814 incident cases, 1,049 controls) in rural Honduras, a high-incidence region with a homogeneous diet and endemic H. pylori infection, primarily with the high-risk CagA genotype. We investigated factors including wood cookstove use, H. pylori CagA serostatus, and 15 variants from 7 metabolizing genes, and the interactions between wood stove use and the genetic variants.
DOI: 10.17632/s9nb3m7wgj.1
title: LINF_220010000

description: Acyl-CoA acyltransferase; Leishmania infantum (strain JPCM5)
DOI: 10.17632/4wv3zbh8gf.1
title: LINF_220010300

description: Dynamin domain containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/vk5xyc57js.1
title: Supplementary file 3 the subgroup analysis (age and sex) by relative ROR and IC delta.

description: To explore if different gender and age affect the disproportionate signal for TLS with CD20 mAbs, we conducted subgroup analyses. Relative ROR(20) and IC delta(21) were used to measure the signal strength. The 95% confidential interval (CI) lower limit of IC delta (ICΔ025) exceeding zero indicated significantly increased risk, and the 95% CI upper limit (ICΔ975) under zero indicated significantly decreased risk.
DOI: 10.17632/zddxv2k83x.1
title: WbaP Structure associated data

description: This dataset contains:

1. XLMS data for S. enterica WbaP in SMALP crosslinking with both DSS and tBu-PhoX crosslinkers

2. CDMS data for S. enterica WbaP in SMALP

3. A model of S. enterica WbaP as a dimer generated by AlphaFold

4. The output of a foldseek analysis of S. enterica WbaP against the alphafold proteome database
DOI: 10.17632/dtw9nd9mwj.1
title: LINF_220010600

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/wz57sjkcxt.1
title: LINF_220011300

description: PWWP domain-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/fvptpshpbz.1
title: Data on analysis of Brazilian milk powder.

description: This dataset provides information on the concentration of Al, As, Ba, Cd, Co, Cr, Cu, Fe, Mg, Mn, Mo, Ni, Pb, Se, V and Zn, as well as thermogravimetric analysis (TG) and differential scanning calorimetry (DSC) and acid methyl esters (FAMEs) from ten samples of Brazilian powdered milk used in infant feeding. Ten brands of Brazilian companies that sell powdered milk used as food.

In detail, the dataset presents: 
1- Values of concentrations of Al, As, Ba, Cd, Co, Cr, Cu, Fe, Mg, Mn, Mo, Ni, Pb, Se, V and Zn in powder milk were obtained by Inductively coupled plasma-optical emission spectroscopy (ICP-OES) (The file "Table 1 -Raw data on Macro- Microelements" contains the concentration of macro and microelements obtained in ten Brazilian companies)
2- Thermogravimetry (TG) and Differential Scanning Calorimetry (DSC) data were performed using thermal analyzer STA 449 F3 Jupter, Netzsch, Selb Alemanha. Graphs were obtained using Universal Analysis Software (The "Raw Thermal Analysis-sample" files contain TG and DSC analysis data from ten Brazilian companies).
3- The fatty acid methyl esters (FAMEs) ere analyzed by gas chromatography (GC 2010, Shimadzu, Kyoto, Japan) to obtain their individual peaks (The "Raw data-fat-composition" files contain FAME analysis data from ten Brazilian companies).
DOI: 10.17632/8bxc27ppym.1
title: Vulpes vulpes_tissue composition_Total mercury

description: This data set concerns the tissue composition (water and lipid proportions) and total mercury in wet, dry and dry-lipid extracted form for red fox tissues (Vulpes vulpes), collected between 2012 and 2020. Contaminant concentrations in wildlife toxicology studies are inconsistently expressed in wet or dry mass units, or even on a lipid-normalized basis, but tissue composition is rarely reported, and the conversion between dry and wet mass units, notably, is often based on assumed empirical moisture contents in tissues. However, diverse factors (e.g., tissue, storage conditions) may affect tissue composition and render comparisons between studies difficult or potentially biased. We used these data as an illustration, to quantify the effects of diverse variables on moisture and lipid contents and their consequences on contaminant concentration in different tissues, when converting between wet and dry mass units (lipid extracted or not). We found that moisture content differed largely between organs, enough to preclude the use of a single conversion factor, and decreased rapidly yearly by 1% when stored in a -80°c freezer. Although most fox tissues have low lipid concentrations, lipid content affected water content and their extraction affected the wet to dry mass conversion factor. We thus recommend reporting tissue composition (at least water and lipid contents) systematically in toxicology studies and using tissue/species specific conversion factors to convert between dry and wet mass concentration.
DOI: 10.17632/bpj99zrshg.1
title: Thalamic regulation of a visual critical period and motor behavior. Hageter et al.

description: During the visual critical period (CP), sensory experience refines the structure and function of visual circuits. The basis of this plasticity was long thought to be limited to cortical circuits, yet recently described thalamic plasticity challenges this dogma and demonstrates greater complexity underlying visual plasticity. Yet how visual experience modulates thalamic neurons or how the thalamus modulates CP timing is incompletely understood. Using a larval zebrafish, thalamus-centric ocular dominance model, we show functional changes in the thalamus and a role of inhibitory signaling to establish CP timing using a combination of functional imaging, optogenetics, and pharmacology. Hemisphere-specific changes in genetically defined thalamic neurons correlate with changes in visuomotor behavior, establishing a role of thalamic plasticity in modulating motor performance. Together, our work demonstrates that visual plasticity is broadly conserved and that visual experience leads to neuron-level functional changes in the thalamus that require inhibitory signaling to establish critical period timing.
DOI: 10.17632/yhj6nb7fcv.1
title: Detection of 11 Carbamate Pesticide Residue in Camel Milk

description: Supplementary Tables (S1-S3) and Figure S1
DOI: 10.17632/x8stnrtfrj.1
title: Salidroside project

description: The project tested primarily the influence of salidroside on cytochrome P450 metabolic activities and a possible mechanism of induced changes. The rats were treated with salidroside at the doses from 5 to 45 mg/kg/day for 7 consecutive days. The liver microsomes were isolated and tested for P450 metabolic activities with specific substrates. In vitro inhibition studies with human liver microsomes and naive rat liver microsomes were also performed.
DOI: 10.17632/km2df7y256.2
title: 2023 CODEX HCC article dataset

description: single cell data table after quality control and cell type/phenotype definition. 
testing_allReg_seurat_._analysis_20220315_AllSubtypes_withoutartifact.csv is for the discovery cohort. It is related to codes in Part 1~5.
testing_allReg_seurat_._analysis_20220411_AllSubtypes.csv is for the validation cohort. It is related to Part 1~5 codes. It is related to codes in Part 6~7.
DOI: 10.17632/ktb66nz86h.1
title: Data for manuscript "UV cross-linkable hybrid resins for 3D printing to achieve high performance and body-temperature programmable shape memory effect"

description: UV cross-linkable hybrid resins for 3D printing to achieve high performance and body-temperature programmable shape memory effect
DOI: 10.17632/8rymxsx46j.1
title: GammarusPulex_DEB_GUTS_T_simulations

description: Raw data files of the simulations executed for and described in the research article "How relevant are temperature corrections of toxicity parameters in population models for environmental risk assessment of chemicals?". The underlying population model (written in the software Smalltalk, Squeak 5.3) and R scripts for the data analysis are available on the GitHub repository: https://github.com/NikaGoldring/GammarusPulex_DEB-GUTS-T.git 
Methods and data analysis can be found in the underlying research article (DOI will follow upon publication).
DOI: 10.17632/cybgt2yvtc.1
title: 5-Aminolevulinic Acid Photodynamic Therapy Versus Minocycline for moderate to severe rosacea: A single-center, randomized, evaluator-blind controlled study.

description: Background: 5-Aminolevulinic acid photodynamic therapy (ALA-PDT) showed potential to treat rosacea according to recent studies, but a lack of clinical evidence and unclear adverse effects limit its use. 
Objective: To compare the effect of ALA-PDT versus minocycline for rosacea.
Methods: In this single-center, randomized, evaluator-blind, controlled study, patients with moderate to severe rosacea were allocated to receive 3 to 5 sessions of ALA-PDT or 8 weeks of 100 mg daily minocycline treatment, followed by a 24-week follow-up.
Results: Of all the 44 randomized patients, 41 received complete treatment (ALA-PDT 20, Minocycline 21). At the end of treatment, ALA-PDT showed non-inferior improvement of papulopustular lesions and Rosacea-related Quality of Life (RosaQoL) compared to minocycline (median reduction of lesion count: 19 vs. 22, median change of RosaQoL score: 0.48 vs. 0.53). The Clinician’s Erythema Assessment (CEA) success of ALA-PDT was lower than minocycline’s (35% vs. 67%). Demodex density and relapse rate were comparable in both groups. Erythema, mild pain and exudation were the most common adverse reactions of ALA-PDT.
Conclusion: As minocycline does, ALA-PDT can improve rosacea mainly in papulopustular lesions and patients’ quality of life, indicating a new option for rosacea.
DOI: 10.17632/cybgt2yvtc.2
title: 5-Aminolevulinic Acid Photodynamic Therapy Versus Minocycline for moderate to severe rosacea: A single-center, randomized, evaluator-blind controlled study.

description: Background: 5-Aminolevulinic acid photodynamic therapy (ALA-PDT) showed potential to treat rosacea according to recent studies, but a lack of clinical evidence and unclear adverse effects limit its use. 
Objective: To compare the effect of ALA-PDT versus minocycline for rosacea.
Methods: In this single-center, randomized, evaluator-blind, controlled study, patients with moderate to severe rosacea were allocated to receive 3 to 5 sessions of ALA-PDT or 8 weeks of 100 mg daily minocycline treatment, followed by a 24-week follow-up.
Results: Of all the 44 randomized patients, 41 received complete treatment (ALA-PDT 20, Minocycline 21). At the end of treatment, ALA-PDT showed non-inferior improvement of papulopustular lesions and Rosacea-related Quality of Life (RosaQoL) compared to minocycline (median reduction of lesion count: 19 vs. 22, median change of RosaQoL score: 0.48 vs. 0.53). The Clinician’s Erythema Assessment (CEA) success of ALA-PDT was lower than minocycline’s (35% vs. 67%). Demodex density and relapse rate were comparable in both groups. Erythema, mild pain and exudation were the most common adverse reactions of ALA-PDT.
Conclusion: As minocycline does, ALA-PDT can improve rosacea mainly in papulopustular lesions and patients’ quality of life, indicating a new option for rosacea.
DOI: 10.17632/tskwf63npx.1
title: Population histories of reproductive failure and low winter precipitation correlate with risk-averse seed germination in a Mediterranean-climate winter annual

description: Year-to-year variation in successful reproduction favors risk-averse seed-germination traits, such as dormancy that spreads risk across years and/or germination stimulated by low-risk conditions. Studies of risk-averse germination often consider whether traits vary with suspected climate drivers of failure. Rarely are long-term demographic records of population failure also available.

Supported by nearly two decades of demographic and climate monitoring, we investigated whether germination traits in the California-endemic winter-annual Clarkia xantiana ssp. xantiana can be predicted by populations’ records of reproductive failure and climate. We submitted seeds of 10 populations—4 with histories of failure—to factorial treatments of 12 levels of water potential and 3 of temperature, analyzing variation in the base water potential required for 20% germination, in the proportion of viable seeds remaining ungerminated after 14 d (a dormancy index), and in the time to germinate weighted by water potential above base (hydrotime).

Populations with a history of reproductive failures had higher base water potential, greater dormancy, and marginally shorter hydrotime. With temperature base water potential increased and hydrotime declined. Dormancy was lowest at the intermediate temperature. A multi-trait index of risk-averse germination declined with mean winter rainfall and increased with a history of reproductive failure.

Finding that populations from areas that receive low rainfall and that have experienced reproductive failure exhibit more risk-averse germination suggests local adaptation. Such intraspecific niche variation may contribute to this species’ geographic distribution. Rapid evolution of germination traits may help maintain adaptation during climate change, buffering populations from extinction.
DOI: 10.15468/dl.fdzgf5
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is The Coleoptera collection (EC) of the Muséum national d'Histoire naturelle (MNHN - Paris)",
 "Geometry POLYGON((43.20237 -11.96511,43.58176 -11.96511,43.58176 -11.32383,43.20237 -11.32383,43.20237 -11.96511))"
 ]
}

 The dataset includes 15 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004258-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/x3kr4sfj96.1
title: SHARP main outcomes paper analysis datasets

description: These are the datasets analyzed for the SHARP main outcomes paper published in Lancet Global Health in 2024: “Two implementation strategies to support the integration of depression screening and treatment into hypertension and diabetes care in Malawi (SHARP): parallel, cluster-randomised, controlled, implementation trial", Brian W. Pence et al, Lancet Global Health, published online 23 Feb 2024. 

NIMH grant # U19MH113202, ClinicalTrials.gov registry # NCT03711786
DOI: 10.17632/njmyjzmj7s.1
title: LDHU3_02.0830

description: Hypothetical protein - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/fzyhj6vjzt.1
title: Supplementary data for the doctoral dissertation “Development and application of palaeoproteomics (ZooMS) on Palaeolithic assemblages from Europe and East Asia”

description: This dataset consists of Table S1 and other files relevant to Section 3.2 of the doctoral dissertation “Development and application of palaeoproteomics (ZooMS) on Palaeolithic assemblages from Europe and East Asia”. The MALDI-TOF-MS rawdata and ZooMS manual identifications are generated and published by Brown et al. (2021), which are included for the new pipeline testing.
DOI: 10.17632/wr6x35b2ct.1
title: LDHU3_03.0060

description: Hypothetical protein - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/7rkjhmw68w.2
title: Understanding sustainable food consumption behavior: the effects of social influence, health, and environmental concerns

description: Data set for the paper Understanding sustainable food consumption behavior: the effects of social influence, health, and environmental concerns
DOI: 10.17632/tskwf63npx.2
title: Population histories of reproductive failure and low winter precipitation correlate with risk-averse seed germination in a Mediterranean-climate winter annual

description: Year-to-year variation in successful reproduction favors risk-averse seed-germination traits, such as dormancy that spreads risk across years and/or germination stimulated by low-risk conditions. Studies of risk-averse germination often consider whether traits vary with suspected climate drivers of failure. Rarely are long-term demographic records of population failure also available.

Supported by nearly two decades of demographic and climate monitoring, we investigated whether germination traits in the California-endemic winter-annual Clarkia xantiana ssp. xantiana can be predicted by populations’ records of reproductive failure and climate. We submitted seeds of 10 populations—4 with histories of failure—to factorial treatments of 12 levels of water potential and 3 of temperature, analyzing variation in the base water potential required for 20% germination, in the proportion of viable seeds remaining ungerminated after 14 d (a dormancy index), and in the time to germinate weighted by water potential above base (hydrotime).

Populations with a history of reproductive failures had higher base water potential, greater dormancy, and marginally shorter hydrotime. With temperature base water potential increased and hydrotime declined. Dormancy was lowest at the intermediate temperature. A multi-trait index of risk-averse germination declined with mean winter rainfall and increased with a history of reproductive failure.

Finding that populations from areas that receive low rainfall and that have experienced reproductive failure exhibit more risk-averse germination suggests local adaptation. Such intraspecific niche variation may contribute to this species’ geographic distribution. Rapid evolution of germination traits may help maintain adaptation during climate change, buffering populations from extinction.
DOI: 10.17632/ccxtpdyhfj.3
title: Synthesis, testing and characterisation of silica-supported nickel phosphide reverse water-gas shift catalysts with varying Ni/P atomic ratios: supplementary materials

description: Silica-supported nickel phosphide catalysts with varying Ni/P atomic ratios (12/5, 2, 1, and 0.5) and 15 wt.% Ni-loading are synthesized. The synthesized catalysts are calcined and subjected to Temperature Programmed Reduction (TPR) analysis to evaluate Hydrogen consumption. Pre-reaction X-ray diffraction (XRD) analysis is performed on all calcined samples after reduction and passivation. The reduced catalysts are tested for the reverse water-gas shift reaction and post-reaction XRD analysis is performed on them. Stability tests are conducted on catalysts with Ni/P atomic ratios of 12/5 and 2, followed by XRD analysis of post-stability samples. The elemental composition of the catalysts at each stage is evaluated via inductively coupled plasma mass spectroscopy (ICP-MS) analysis. All experimental data is made available for re-use through this platform.
DOI: 10.17632/rn96hp5kw4.1
title: Reconstructing the functional effect of TP53 somatic mutations on its regulon using causal signalling network modelling

description: Data repository for the referenced manuscript.

All generated and optimized networks for TCGA and CCLE can be found in the corresponding .zip files. The Machine Learning input files can be found in the "GLM_FINAL.zip". The signatures and related preprocessing can be found in the "BC_signatures.zip" file with the "centrality.zip" containing the calculation of the network metrics. Required general input files and R packages are also given. For the hypoxic and radiation experiments, separate .zip files have been uploaded.
DOI: 10.17632/rn96hp5kw4.2
title: TP53

description: Data repository for the referenced manuscript.

All generated and optimized networks for TCGA and CCLE can be found in the corresponding folders. The input files have been included as a Shiny App .zip file, which combined with the cited GitHub repository below, provide a full Shiny App with GUI to reproduce the results. Results concerning the ML and community detection signatures plus survival data used are provided also in the corresponding folders.
DOI: 10.17632/b5ywrnjbj3.1
title: Exploring Human Capital Investment in West Sumatra Indonesia

description: The important part of human capital investment is to involve economic growth, especially concern today after the COVID-19 pandemic. The purpose of this study is to explore the factors influencing human capital investment among people in West Sumatra on several levels of social status. This study adopted a case study approach to investigate human capital investment among people in west Sumatra on several levels of social status. The first two participants were from cultural and academic backgrounds, while the third was a farmer from the general public. The data were collected for seven months through observations, interviews, and documents until saturated. This study found that there are three major indicators formed related to human capital investment, namely human capital obtained from the similarity of statements from the four research informants stating cultural factors in Minangkabau that encourage a person to invest in human capital, especially in the field of education. The second indicator found is the relationship between the concept of out-migration (merantau) and family education. The last indicator is that the socio-economic status of Minang families will be indirectly raised due to investment in education for their children. The novelty element of this research is that it highlights how the matrilineal social and cultural system adopted by the Minangkabau ethnic group in Indonesia views the importance of investing in human resources for their children's future. This research elaborates its discussion from the economic, socio-cultural, and educational perspectives.
DOI: 10.17632/988rrt5dk8.1
title: Gahlot et al. Mol Cell 2024_Part 3: Figure 2-5 and S8A-B

description: Raw data for the manuscript "Lysosomal damage sensing and lysophagy initiation by SPG20-ITCH" by Gahlot et al.
Original microscopy imaging files, uncropped western blots, uncropped Coomassie gels and automated image analysis pipelines used for the quantification of microscopy data.
The set is split into 8 parts because of data size (max upload per set is 10 GB).
Part 1: Figures 1A-G and S2C
Part 2: Figure 1F-G
Part 3: Figures 2-5 and S8A-B
Part 4: Figures 6, S1 and S9A
Part 5: Figure S2
Part 6: Figure S2D-E (n2)
Part 7: Figures S3-S7
Part 8: Figures S8-S10
DOIs for other parts:
Part 1: DOI: 10.17632/6kfbpr73w6.1
Part 2: DOI: 10.17632/3fjzxbr679.1
Part 4: DOI: 10.17632/8bjbtwc2fp.1
Part 5: DOI: 10.17632/pvz62pdt4n.1
Part 6: DOI: 10.17632/gdhpxjpsp5.1
Part 7: DOI: 10.17632/k5grf4464j.1
Part 8: DOI: 10.17632/mhzfnvnfws.1
DOI: 10.17632/8tx9b5tkmx.1
title: Data on carbon isotope fractionation during natural gas transport in sedimentary rocks

description: A dataset of carbon isotope ratios for effluent methane after natural gas transport through five shales with various material compositions and pore sturctures at different gas pressure and confining pressures.