cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5830776.v1
title: Theoretical ribosomal protein mass fingerprint of Thermus thermophilus

description: This is a dataset containing the molecular mass of various ribosomal proteins in the large and small ribosome subunit of <i>Thermus thermophilus </i>HB8.<br><br>
DOI: 10.6084/m9.figshare.5830758
title: Description and release of Australian gravity field model testing data

description: Gravimetric geoid and/or quasigeoid models are routinely evaluated using co-located GPS-levelling and/or astrogeodetic vertical deflections, globally and regionally. This short note describes these ground-truth data for Australia as of August 2017, which are provided as Electronic Supplementary Material. We provide ∼7500 GPS-derived ellipsoidal heights, normal-orthometric heights from the 1971 adjustment of the Australian Height Datum, normal heights from a readjustment of levelling constrained to a model of the ocean's mean dynamic topography, and ∼1000 historical astrogeodetic vertical deflections. Updates to these data will be posted on the Intergovernmental Committee on Surveying and Mapping GitHub repository (https://github.com/icsm-au), together with a readme.txt file describing them.
DOI: 10.6084/m9.figshare.5830758.v1
title: Description and release of Australian gravity field model testing data

description: Gravimetric geoid and/or quasigeoid models are routinely evaluated using co-located GPS-levelling and/or astrogeodetic vertical deflections, globally and regionally. This short note describes these ground-truth data for Australia as of August 2017, which are provided as Electronic Supplementary Material. We provide ∼7500 GPS-derived ellipsoidal heights, normal-orthometric heights from the 1971 adjustment of the Australian Height Datum, normal heights from a readjustment of levelling constrained to a model of the ocean's mean dynamic topography, and ∼1000 historical astrogeodetic vertical deflections. Updates to these data will be posted on the Intergovernmental Committee on Surveying and Mapping GitHub repository (https://github.com/icsm-au), together with a readme.txt file describing them.
DOI: 10.17633/rd.brunel.5830677
title: Numerical Simulation of the Gasoline Spray with an Outward-Opening Piezoelectric Injector: A Comparative Study of Different Breakup Models

description: The data used in the following paper is archived here:<br>Wang, X. and Zhao, H., "Numerical Simulation of the Gasoline Spray with an Outward-Opening Piezoelectric Injector: A Comparative Study of Different Breakup Models". SAE Technical Paper 2018-01-0272.<br>The descriptions for each data are listed in "captions.docx".
DOI: 10.6084/m9.figshare.5830668
title: Data from: Native forest replacement changes fruit geometry on Tristerix corymbosus (Loranthaceae), a keystone mistletoe

description: Original dataset from Fontúrbel & Candia (2018) Gayana Botanica.<br>
DOI: 10.6084/m9.figshare.5830668.v1
title: Data from: Native forest replacement changes fruit geometry on Tristerix corymbosus (Loranthaceae), a keystone mistletoe

description: Original dataset from Fontúrbel & Candia (2018) Gayana Botanica.<br>
DOI: 10.6084/m9.figshare.5830644
title: S3_table_Reads_map

description: Number of short reads re-mapping to all known Drosophila viruses and to novel <i>D. suzukii </i>viruses from pools of <i>D. suzukii </i>caught in native, Japanese, and invasive, British, ranges.
DOI: 10.6084/m9.figshare.5830644.v1
title: S3_table_Reads_map

description: Number of short reads re-mapping to all known Drosophila viruses and to novel <i>D. suzukii </i>viruses from pools of <i>D. suzukii </i>caught in native, Japanese, and invasive, British, ranges.
DOI: 10.6084/m9.figshare.5830638
title: Grd-i Tle lithic database

description: The Eötvös Loránd University of Sciences (Budapest) archaeological expedition to Iraqi Kurdistan is excavating a tell site at Grd-i Tle. This is the database of knapped lithics and ground stone artefacts recovered from the site. We present the artefacts with an attribute-based methodology according to a life-history approach of material culture. We publish this data in order to apply intelligent openness during our research. The first publication about this database and the lithics is published by DissArch in 2018. You can find the link in the references field.
DOI: 10.6084/m9.figshare.5830638.v1
title: Grd-i Tle lithic database

description: The Eötvös Loránd University of Sciences (Budapest) archaeological expedition to Iraqi Kurdistan is excavating a tell site at Grd-i Tle. This is the database of knapped lithics and ground stone artefacts recovered from the site. We present the artefacts with an attribute-based methodology according to a life-history approach of material culture. We publish this data in order to apply intelligent openness during our research. The first publication about this database and the lithics is published by DissArch in 2018. You can find the link in the references field.
DOI: 10.6084/m9.figshare.5830623
title: The LINGO code and instructions for SECA

description: The file contains the LINGO code and instructions for using SECA (Simultaneous Evaluation of Criteria and Alternatives) in multi-criteria decision-making problems.
DOI: 10.6084/m9.figshare.5830584
title: Additional file 7: of Metagenomic investigation of vestimentiferan tubeworm endosymbionts from Mid-Cayman Rise reveals new insights into metabolism and diversity

description: Genes involved in major metabolic pathways, symbiontâ host interactions, and protein secretion in MCR MAGs 1 and 2 in comparison with the Riftia, Tevnia, and Ridgeia symbiont metagenomes. Gene clusters were identified by ITEP and annotated with RAST. The last column indicates gene clusters only present in the MCR MAG bins (value =1). (XLSX 39Â kb)
DOI: 10.6084/m9.figshare.5830584.v1
title: Additional file 7: of Metagenomic investigation of vestimentiferan tubeworm endosymbionts from Mid-Cayman Rise reveals new insights into metabolism and diversity

description: Genes involved in major metabolic pathways, symbiontâ host interactions, and protein secretion in MCR MAGs 1 and 2 in comparison with the Riftia, Tevnia, and Ridgeia symbiont metagenomes. Gene clusters were identified by ITEP and annotated with RAST. The last column indicates gene clusters only present in the MCR MAG bins (value =1). (XLSX 39Â kb)
DOI: 10.6084/m9.figshare.5830572
title: MOESM9 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 9. Gene expression (FPKM) across mouse embryonic stages.
DOI: 10.6084/m9.figshare.5830572.v1
title: MOESM9 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 9. Gene expression (FPKM) across mouse embryonic stages.
DOI: 10.6084/m9.figshare.5830566
title: Additional file 5: of Metagenomic investigation of vestimentiferan tubeworm endosymbionts from Mid-Cayman Rise reveals new insights into metabolism and diversity

description: General genome metadata and quality information for MCR MAGs 1 and 2 assembled from Escarptia sp. and Lamellibrachia sp. 2. (XLSX 39Â kb)
DOI: 10.6084/m9.figshare.5830566.v1
title: Additional file 5: of Metagenomic investigation of vestimentiferan tubeworm endosymbionts from Mid-Cayman Rise reveals new insights into metabolism and diversity

description: General genome metadata and quality information for MCR MAGs 1 and 2 assembled from Escarptia sp. and Lamellibrachia sp. 2. (XLSX 39Â kb)
DOI: 10.6084/m9.figshare.5830554
title: MOESM8 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 8. SRA data information used to generate embryonic gene expression data.
DOI: 10.6084/m9.figshare.5830554.v1
title: MOESM8 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 8. SRA data information used to generate embryonic gene expression data.
DOI: 10.6084/m9.figshare.5830551
title: Additional file 7: Table S5. of Resistance to Plum Pox Virus (PPV) in apricot (Prunus armeniaca L.) is associated with down-regulation of two MATHd genes

description: Similarity analysis between apricot and peach PPVres locus genes. (XLS 17 kb)
DOI: 10.6084/m9.figshare.5830551.v1
title: Additional file 7: Table S5. of Resistance to Plum Pox Virus (PPV) in apricot (Prunus armeniaca L.) is associated with down-regulation of two MATHd genes

description: Similarity analysis between apricot and peach PPVres locus genes. (XLS 17 kb)
DOI: 10.6084/m9.figshare.5830548
title: MOESM2 of Prediction of HIV-associated neurocognitive disorder (HAND) from three genetic features of envelope gp120 glycoprotein

description: Additional file 2.
DOI: 10.6084/m9.figshare.5830548.v1
title: MOESM2 of Prediction of HIV-associated neurocognitive disorder (HAND) from three genetic features of envelope gp120 glycoprotein

description: Additional file 2.
DOI: 10.6084/m9.figshare.5830542
title: Additional file 1: Tables S1â S9. of Significant transcriptional changes in 15q duplication but not Angelman syndrome deletion stem cell-derived neurons

description: Complete GSEA analysis for all samples and FOXO1 and functional enrichment analysis of ASD brain vs Dup15q DPSC neurons. S9 is a table of primers used for qRT-PCR. (XLSX 68Â kb)
DOI: 10.6084/m9.figshare.5830542.v1
title: Additional file 1: Tables S1â S9. of Significant transcriptional changes in 15q duplication but not Angelman syndrome deletion stem cell-derived neurons

description: Complete GSEA analysis for all samples and FOXO1 and functional enrichment analysis of ASD brain vs Dup15q DPSC neurons. S9 is a table of primers used for qRT-PCR. (XLSX 68Â kb)
DOI: 10.6084/m9.figshare.5830533
title: MOESM7 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 7. Data used for statistical tests of overlap between sets of one-to-one orthologues regulated by mouse and human ETCHbox genes.
DOI: 10.6084/m9.figshare.5830533.v1
title: MOESM7 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 7. Data used for statistical tests of overlap between sets of one-to-one orthologues regulated by mouse and human ETCHbox genes.
DOI: 10.6084/m9.figshare.5830518
title: MOESM6 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 6. List of one-to-one orthologues similarly regulated following ectopic expression of human ARGFX and mouse Crxos.
DOI: 10.6084/m9.figshare.5830518.v1
title: MOESM6 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 6. List of one-to-one orthologues similarly regulated following ectopic expression of human ARGFX and mouse Crxos.
DOI: 10.6084/m9.figshare.5830512
title: Additional file 3: of Metagenomic investigation of vestimentiferan tubeworm endosymbionts from Mid-Cayman Rise reveals new insights into metabolism and diversity

description: Isolate and vestimentiferan symbiont metagenome information for taxa included in Fig.Â 3 including organism name, NCBI TaxID, Genbank Accession number and reference. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.5830512.v1
title: Additional file 3: of Metagenomic investigation of vestimentiferan tubeworm endosymbionts from Mid-Cayman Rise reveals new insights into metabolism and diversity

description: Isolate and vestimentiferan symbiont metagenome information for taxa included in Fig.Â 3 including organism name, NCBI TaxID, Genbank Accession number and reference. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.5830497
title: Additional file 2: of Metagenomic investigation of vestimentiferan tubeworm endosymbionts from Mid-Cayman Rise reveals new insights into metabolism and diversity

description: Measurements of Escarpia sp. and Lamellibrachia sp. 2 MCR vestimentiferan specimens used in this study. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.5830497.v1
title: Additional file 2: of Metagenomic investigation of vestimentiferan tubeworm endosymbionts from Mid-Cayman Rise reveals new insights into metabolism and diversity

description: Measurements of Escarpia sp. and Lamellibrachia sp. 2 MCR vestimentiferan specimens used in this study. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.5830494
title: MOESM5 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 5. Observed and expected numbers of significantly regulated genes populating temporal expression profiles used for enrichment analysis.
DOI: 10.6084/m9.figshare.5830494.v1
title: MOESM5 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 5. Observed and expected numbers of significantly regulated genes populating temporal expression profiles used for enrichment analysis.
DOI: 10.6084/m9.figshare.5830485
title: Additional file 3: of Resistance to Plum Pox Virus (PPV) in apricot (Prunus armeniaca L.) is associated with down-regulation of two MATHd genes

description: Data S1. Putative peach orthologs of the apricot assembled transcriptome. (TXT 2064 kb)
DOI: 10.6084/m9.figshare.5830485.v1
title: Additional file 3: of Resistance to Plum Pox Virus (PPV) in apricot (Prunus armeniaca L.) is associated with down-regulation of two MATHd genes

description: Data S1. Putative peach orthologs of the apricot assembled transcriptome. (TXT 2064 kb)
DOI: 10.6084/m9.figshare.5830479
title: MOESM4 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 4. Mfuzz clusters and genes within each cluster.
DOI: 10.6084/m9.figshare.5830479.v1
title: MOESM4 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 4. Mfuzz clusters and genes within each cluster.
DOI: 10.6084/m9.figshare.5830467
title: MOESM5 of Developmental constraint through negative pleiotropy in the zygomatic arch

description: Additional file 5. A.csv phenotype file with linear distance measures and covariates for the validation DO sample discussed in this analysis.
DOI: 10.6084/m9.figshare.5830467.v1
title: MOESM5 of Developmental constraint through negative pleiotropy in the zygomatic arch

description: Additional file 5. A.csv phenotype file with linear distance measures and covariates for the validation DO sample discussed in this analysis.
DOI: 10.6084/m9.figshare.5830461
title: MOESM3 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 3. Lists of genes significantly up- or down-regulated following ectopic expression.
DOI: 10.6084/m9.figshare.5830461.v1
title: MOESM3 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 3. Lists of genes significantly up- or down-regulated following ectopic expression.
DOI: 10.6084/m9.figshare.5830449
title: MOESM4 of Developmental constraint through negative pleiotropy in the zygomatic arch

description: Additional file 4. A.csv phenotype file with linear distance measures and covariates for the primary DO sample discussed in this analysis.
DOI: 10.6084/m9.figshare.5830449.v1
title: MOESM4 of Developmental constraint through negative pleiotropy in the zygomatic arch

description: Additional file 4. A.csv phenotype file with linear distance measures and covariates for the primary DO sample discussed in this analysis.
DOI: 10.6084/m9.figshare.5830446
title: MOESM2 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 2. Nucleotide and protein sequences used for Obox phylogenetic analyses.
DOI: 10.6084/m9.figshare.5830425
title: MOESM3 of Developmental constraint through negative pleiotropy in the zygomatic arch

description: Additional file 3. A.csv phenotype file with linear distance measures and covariates for the CC Parental/F1 sample discussed in this analysis.
DOI: 10.6084/m9.figshare.5830425.v1
title: MOESM3 of Developmental constraint through negative pleiotropy in the zygomatic arch

description: Additional file 3. A.csv phenotype file with linear distance measures and covariates for the CC Parental/F1 sample discussed in this analysis.
DOI: 10.6084/m9.figshare.5830416
title: MOESM11 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 11. Average FPKM values for experimental datasets.
DOI: 10.6084/m9.figshare.5830416.v1
title: MOESM11 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 11. Average FPKM values for experimental datasets.
DOI: 10.6084/m9.figshare.5830410
title: Additional file 2: of Quality of care during childbirth in Tanzania: identification of areas that need improvement

description: Example analysis process. (XLSX 1574 kb)
DOI: 10.6084/m9.figshare.5830410.v1
title: Additional file 2: of Quality of care during childbirth in Tanzania: identification of areas that need improvement

description: Example analysis process. (XLSX 1574 kb)
DOI: 10.6084/m9.figshare.5830392
title: MOESM10 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 10. Gene expression (raw reads) from triplicate RNA sequencing of mouse embryonic fibroblasts following ectopic expression of mouse ETCHbox genes.
DOI: 10.6084/m9.figshare.5830392.v1
title: MOESM10 of Mouse Obox and Crxos modulate preimplantation transcriptional profiles revealing similarity between paralogous mouse and human homeobox genes

description: Additional file 10. Gene expression (raw reads) from triplicate RNA sequencing of mouse embryonic fibroblasts following ectopic expression of mouse ETCHbox genes.
DOI: 10.6084/m9.figshare.5830389
title: MOESM1 of Developmental constraint through negative pleiotropy in the zygomatic arch

description: Additional file 1. A.csv file with sequence details and identification of primers used during RT-PCR analysis.
DOI: 10.6084/m9.figshare.5830389.v1
title: MOESM1 of Developmental constraint through negative pleiotropy in the zygomatic arch

description: Additional file 1. A.csv file with sequence details and identification of primers used during RT-PCR analysis.
DOI: 10.6084/m9.figshare.5830383
title: Additional file 11: Table S9. of Resistance to Plum Pox Virus (PPV) in apricot (Prunus armeniaca L.) is associated with down-regulation of two MATHd genes

description: Filtered variants putatively associated with Plum pox virus (PPV) resistance. (XLS 121 kb)
DOI: 10.6084/m9.figshare.5830383.v1
title: Additional file 11: Table S9. of Resistance to Plum Pox Virus (PPV) in apricot (Prunus armeniaca L.) is associated with down-regulation of two MATHd genes

description: Filtered variants putatively associated with Plum pox virus (PPV) resistance. (XLS 121 kb)
DOI: 10.6084/m9.figshare.5830329
title: Using fuzzy set qualitative comparative analysis (fsQCA) to identify indicators for wiki collaboration

description: The data set includes all the research data from my paper "Using fuzzy set qualitative comparative analysis (fsQCA) to identify indicators for wiki collaboration" (see https://ssrn.com/abstract=3104790). This includes:1. Social network files (*.net), which have been established using a script (see https://gist.github.com/ckummer/4b8c44f5125a8ec2b8c56f30dffc5936) and Pajek macros. The data gathering is outlined in my research blog (see https://ckummer.wordpress.com/2018/01/28/indicator-based-monitoring-of-collaboration-in-mediawiki/).2. Results from the content analysis of the discussion pages from the wiki,3. Calculated network indices per group as well as evaluation of group collaboration,4. the R script for the fuzzy set qualitative comparative analysis.<br>All data is anonymized.<br>Please refer to the file <i>Description of files.docx</i> for an extensive description of the files within this dataset.<br>In case of any questions, my blog post (https://ckummer.wordpress.com/2018/01/28/indicator-based-monitoring-of-collaboration-in-mediawiki/) about the data preparation as well as my paper (https://ssrn.com/abstract=3104790) will be a good starting point.
DOI: 10.6084/m9.figshare.5830329.v1
title: Using fuzzy set qualitative comparative analysis (fsQCA) to identify indicators for wiki collaboration

description: The data set includes all the research data from my paper "Using fuzzy set qualitative comparative analysis (fsQCA) to identify indicators for wiki collaboration" (see https://ssrn.com/abstract=3104790). This includes:1. Social network files (*.net), which have been established using a script (see https://gist.github.com/ckummer/4b8c44f5125a8ec2b8c56f30dffc5936) and Pajek macros. The data gathering is outlined in my research blog (see https://ckummer.wordpress.com/2018/01/28/indicator-based-monitoring-of-collaboration-in-mediawiki/).2. Results from the content analysis of the discussion pages from the wiki,3. Calculated network indices per group as well as evaluation of group collaboration,4. the R script for the fuzzy set qualitative comparative analysis.<br>All data is anonymized.<br>Please refer to the file <i>Description of files.docx</i> for an extensive description of the files within this dataset.<br>In case of any questions, my blog post (https://ckummer.wordpress.com/2018/01/28/indicator-based-monitoring-of-collaboration-in-mediawiki/) about the data preparation as well as my paper (https://ssrn.com/abstract=3104790) will be a good starting point.
DOI: 10.6084/m9.figshare.5830326
title: Database Production Senegal (1997-2016)

description: Database of 20 years of historical data of crop production in Senegal.<br>Source: DIRECTION DE L'ANALYSE, DE LAPRÉVISION ET DES STATISTIQUES AGRICOLES (DAPSA, http://www.dapsa.gouv.sn/)
DOI: 10.6084/m9.figshare.5830326.v2
title: Database Production Senegal (1997-2016)

description: Database of 20 years of historical data of crop production in Senegal.<br>Source: DIRECTION DE L'ANALYSE, DE LAPRÉVISION ET DES STATISTIQUES AGRICOLES (DAPSA, http://www.dapsa.gouv.sn/)
DOI: 10.6084/m9.figshare.5830326.v1
title: Database Production Senegal (1997-2016)

description: Database of 20 years of historical data of crop production in Senegal.<br>Source: DIRECTION DE L'ANALYSE, DE LAPRÉVISION ET DES STATISTIQUES AGRICOLES (DAPSA, http://www.dapsa.gouv.sn/)
DOI: 10.6084/m9.figshare.5830317
title: Figs2 3 and 4

description: This dataset is analysed and presented in this paper:<br>Timms<sup> </sup>W, RI Acworth, R Crane, CH Arns, JYArns, D McGeeney, G Rau, M Cuthbert (2017) The influence of syn-depositional macropores on the hydraulic integrity of thick alluvial clay aquitards <i>Water Resources Research</i>, revised submission.
DOI: 10.6084/m9.figshare.5830317.v1
title: Figs2 3 and 4

description: This dataset is analysed and presented in this paper:<br>Timms<sup> </sup>W, RI Acworth, R Crane, CH Arns, JYArns, D McGeeney, G Rau, M Cuthbert (2017) The influence of syn-depositional macropores on the hydraulic integrity of thick alluvial clay aquitards <i>Water Resources Research</i>, revised submission.