cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23060231.v1
title: Monarch Diet Flight Data

description: Data to accompany <strong>Larval diet impacts flight performance in monarch butterflies from two populations</strong> by (Article DOI: 10.1111/een.13255) by Ali Ebada<sup>1</sup>, Jacobus C. de Roode<sup>1</sup>, Ania A. Majewska<sup>2</sup> <br> Institutional affiliations: 1 Department of Biology, Emory University, Atlanta, GA 30322, USA 2 Department of Physiology and Pharmacology, College of Veterinary Medicine, University of Georgia, Athens, GA 30602, USA <br> Corresponding author: Ania A. Majewska (majewska@uga.edu). <br> <br> Each row represents an individual monarch. Flight metrics are aggregate values for a successful flight.
DOI: 10.6084/m9.figshare.27216024.v1
title: Multimodal_dataset.zip

description: This is an Audio video dataset for fluencybank
DOI: 10.6084/m9.figshare.28067477.v1
title: RT-qPCR data generated in the paper

description: RT-qPCR generated in the paper
DOI: 10.17632/pmkbyjpf6k
title: BRACOT - A Brazilian Arabica Coffee Tree images dataset for instance segmentation of coffee leaves

description: The dataset constructed contains images of part of Arabica coffee trees affected by biotic stresses. The images were obtained using a smartphone Galaxy S8. The images were collected in September 2019 and March 2020 in the mountain regions of Santa Maria, Marechal Floriano, state of Espirito Santo, Brazil. The photos were taken in a coffee plantation. A total of 300 images of part of Arabica coffee trees were collected, including healthy leaves and diseased leaves, affected by one or more types of biotic stresses: leaf miner, rust, brown leaf spot, and cercospora leaf spot.
DOI: 10.17632/wbyfr6wmzb
title: HRSS2024_JFE_Replication

description: This code has been tested on MATLAB R2024a and requires the distrib_computing, econometrics, optimization, and statistics toolboxes to be installed. The main script to run the chain of programmes is named HRSS2024_JFE_Replication. To run these mFiles (files ending .m) it is necessary to open them up in the editor and then either hit F5 or mark sections of the code and then run using F9. Tables are created as stand-alone texFiles (files ending .tex) and are stored in the folder ./Tables/pseudo/. Figures are printed as stand-alone pdfFiles (files ending .pdf) and are stored in the folder ./Figures/pseudo/. Intermediate results are stored as matFiles (files ending .mat) in the folder ./_matFiles.
DOI: 10.6084/m9.figshare.2058792.v2
title: SMILES from PMID 26642067 Rebollo et al Plos One 2015

description: Downloaded from Dryad and edited<br>
DOI: 10.6084/m9.figshare.28281197.v1
title: Data for: Phosphorus Enrichment Increases the Prevalence of a Microsporidian Parasite in Experimental <i>Daphnia</i> Populations

description: .csv files containing data on manipulated<i> Daphnia magna</i> populations, parasitized by <i>Hamiltosporidium tvaerminnensis, </i>and 1 .txt file containing column information.
DOI: 10.6084/m9.figshare.28596347.v1
title: 无标题项目

description: 本文重点介绍中国河北省曹妃甸市的妈祖文化节，探讨其对当地农民生计发展的影响。通过实地调研和定量分析发现，妈祖文化节不仅是一项宗教文化活动，而且显著促进了当地经济多元化。这个节日吸引了大量的游客，增加了对当地特产和旅游服务的需求，从而直接或间接地增加了农民的收入。因此，本文通过预测妈祖文化节对当地餐饮、购物和文化娱乐的影响，以及为农民创造就业机会的潜力，估计了马祖文化节在河北省曹妃甸区的潜在经济贡献。节日活动不仅增强了社区凝聚力和农民对当地文化的认同感，还进一步促进了社区的可持续发展。妈祖文化节可以被视为乡村振兴的有效工具，应加大文化活动作为资源的作用，进一步释放他们在乡村发展中的潜力，实现可持续发展，提高农民生活水平。
DOI: 10.17632/524cr43x9j
title: X-Ray Fluorescence data from the Pacific margin of the Antarctic Peninsula

description: X-Ray Fluorescence data for sediment cores SED-11, SED-12, SED-18 and SED-20, acquired from the Pacific margin of the Antarctic Peninsula.
DOI: 10.17632/74sfv9kx9n
title: Data for "Household Mobility and Mortgage Rate Lock"

description: Replication package for Household Mobility and Mortgage Rate Lock, forthcoming in the Journal of Financial Economics.
DOI: 10.17632/x5wh4zn6mg
title: Subducted plate geometry, age, and subduction earthquakes beneath Sumatra

description: The datasets provided include key geophysical data focusing on seismic activity along specific profiles (A-E), with each profile corresponding to different sections of the subduction zone. The Data Frames for both dip and age provide critical information on the angle of the subducting plate and its geological age, respectively, which influence seismic behavior along the trench. The suma_seafloor_age dataset provides the age of the seafloor in the region, contributing to understanding the subduction process. The suma_slab2_dep dataset represents the depth of the subducting slab. The suma_slab2_dip dataset gives the dip angle of the subducting plate. The correlation results for age and dip include statistical measures such as Pearson’s r, p-value, slope, intercept, R-squared, and standard error, offering insights into the relationships between these factors and seismic depth. The GCMT Thrust data captures thrust faulting mechanisms along the trench. The USGS Suma2000 data contains earthquake magnitude and focal depth information from 2000 to 2025, providing a comprehensive view of seismicity along the region.
DOI: 10.4121/20555505.v1
title: The balance between openness and privacy for health data collected through citizen science: various perspectives

description: Transcript of a 1.5 hour focus group discussion with 2 citizens, a data steward, an ethicist and a citizen science researcher. The group discussed their willingness to share data collected in citizen science for health projects in repositories, the desired level of openness, and how data sharing policies should be communicated with participants in the research projects. The discussion was held in Dutch, an English translation (translated by the reseachers themselves) is also available. A public summary of the results can be found through this link: https://www.topfitcitizenlab.nl/wp-content/uploads/2022/02/Outcomes-focusgroup-FAIR-and-privacy_english-1.pdf The project was carried out as part of the TOPFIT Citizenlab, a fieldlab focusing on citizen science for health and wellbeing.
DOI: 10.6084/m9.figshare.21982496.v1
title: CloneTracer output

description: CloneTracer outputs <br> tar.gz file which contains for each patient a list with the following items: <br> patient: patient name M: matrix with mutant counts (mutationsxcells) N: matrix with reference counts (mutationsxcells) mutations_matrix: column names of M and N matrix with mutation names cell_barcode: rownames of M and N matrix trees: clonal hierarchies with the highest evidence according to CloneTracer. Binary encoding (0: abscence of mutation ; 1: presence of mutation) mutations_tree: column names of trees tree_indices: indices of selected trees over all potential_trees (only required for internal functions) clonal_prob: list of matrices with clonal probabilities corresponding to trees listed in trees slot selected_tree: tree selected for downstream analysis selected_clonal_probs: clonal probabilities of selected tree selected_tree_ind: index of selected tree ELBO: ELBO values for all trees stored in potential_trees slot. potential_trees: list of trees evaluated in the last inference step of the model. children and parent: only required for internal functions. <br> We provide costumised functions and example vignettes to visualize this type of data in https://github.com/veltenlab/CloneTracer/tree/master/clonal_inference/vignettes
DOI: 10.6084/m9.figshare.25765377.v1
title: 1DSchrodinger_TBC

description: This is the data files for finite difference discretization of 1D Schrodinger equation equipped with the TBCs.
DOI: 10.6084/m9.figshare.8977289.v1
title: Seedling_Survival_Data

description: This is species-specific seedling survival data along with site-specific degree days less than zero and temperature differential between maximum temperature of warmest month and minimum temperature of coldest month.
DOI: 10.17632/448zhfvrm7
title: [Dataset] Do System Quality and Information Quality affect Job Performance

description: This dataset is the result of a survey of 118 correctional officers at Sumatra Region, Indonesia. This dataset includes five research variables consisting of System Quality (SQ), Information Quality (IQ), Perceived Ease of Use (PEOU), Perceived Usefulness (PU), Job Performance (JP).
DOI: 10.17632/9swkp6cfgt
title: GCA-D-24-00638R1_Data

description: This dataset encompasses compositional analyses of the phases generated during the experiments, the mass balance of these phases and the starting mixture, as well as the proportions used in the experiments detailed in this paper. It includes all data presented in the main manuscript and supplementary files.
DOI: 10.6084/m9.figshare.13370954.v1
title: PrePrint Data Motagua.xlsx

description: Macroplastic flux observations in Motagua River, Guatemala. Data from January and May till October 2019.
DOI: 10.6084/m9.figshare.20775424.v1
title: Mouse kidney cell type relabeling map

description: Dictionary for relabeling fine-grained kidney cell types to coarser labels, used in generating scVI and symphony objects.
DOI: 10.6084/m9.figshare.13322450.v1
title: European LCZ map

description: A European Local Climate Zone map at a 100 m spatial resolution, derived from multiple earth observation datasets and expert LCZ class labels. There are 10 urban LCZ types, each associated with a set of relevant variables such that the map represent a valuable database of urban properties.
DOI: 10.6084/m9.figshare.29100548.v1
title: Dataset Tweet About Digital Payment Services in Indonesia (OVO, GOPAY, DANA) taken from Oct 24 to Dec 24

description: dataset pembayaran digital di indonesia mencakup ovo, dan, gopay periode Oct 24 to Dec 24 (karena tweet policy maka hanya berisi tweet ID , user ID, serta label sentimen)
DOI: 10.6084/m9.figshare.7067435.v1
title: Supplementary Material for: Recall and Retention of Consent Procedure Contents and Decisions: Results of a Randomized Controlled Trial

description: <b><i>Background:</i></b> Residual tissue samples, i.e., samples excised for diagnosis or during treatment, are commonly used for medical research. In the Netherlands, they can be used provided the patient did not opt out of this use. Previous research has shown that recall of the informed consent procedure for tissue use is poor. Here, we investigate recall of three consent procedures: informed consent, opt-out, and opt-out plus (an opt-out procedure with an information procedure similar to that of informed consent). <b><i>Methods:</i></b> Patients (<i>n</i> = 1,319) with a variety of diseases were randomized into three trial arms: informed consent, opt-out plus, and opt-out. Questionnaires were administered 6 weeks and 6 months after randomization. <b><i>Results:</i></b> Six hundred and seventy-three and 553 patients returned the 6-week and 6-month questionnaire, respectively. In the informed consent arm, recall of having received a brochure (55.3%) or oral information (69.4%) was similar to that in the opt-out plus arm (48.5 and 71.6%, respectively), at the 6-week assessment. Significantly more respondents in the informed consent and the opt-out plus arms versus the opt-out arm recalled that they had been informed about being able to control tissue use and which consent procedure they had experienced (6-week questionnaire range 53.2–75.8 vs. 13.9–16.1%; 6-month questionnaire range 43.5–84.2 vs. 3.2–35.4%). There were no significant differences between the informed consent and opt-out plus arms in this regard. <b><i>Conclusions:</i></b> Recall of the consent procedure was similar in opt-out plus and informed consent procedures. Overall, recall was moderate, indicating that there is room for improvement in the quality of information provision.
DOI: 10.6084/m9.figshare.8869859.v1
title: Supplementary Material for: No Effect of Genome-Wide Significant Schizophrenia Risk Variation at the <b><i>DRD2</i></b> Locus on the Allelic Expression of <b><i>DRD2</i></b> in Postmortem Striatum

description: A genome-wide significant association has been reported between non-coding variants at the dopamine D2 receptor (<i>DRD2</i>) gene locus and schizophrenia. However, effects of identified schizophrenia risk alleles on <i>DRD2</i> function are yet to be demonstrated. Using highly sensitive measures of allele-specific expression, we have assessed <i>cis</i>-regulatory effects associated with genotype at lead SNP rs2514218 on <i>DRD2</i>expression in the adult human striatum. No significant differences were observed in the extent of allelic expression imbalance between samples that were genomic heterozygotes for rs2514218 (where <i>cis</i>-regulatory effects of the risk allele are compared with those of the non-risk allele within individual subjects) and samples that were homozygous for rs2514218 (where <i>cis</i>-regulatory effects of this SNP on each expressed <i>DRD2</i> allele will be equal). We therefore conclude that rs2514218 genotype is not associated with large effects on overall <i>DRD2</i> RNA expression, at least in postmortem adult striatum. Alternative explanations for the genetic association between this variant and schizophrenia include effects on <i>DRD2</i> that are transcript specific, restricted to minor <i>DRD2</i>-expressing cell populations or elicited only under certain physiological circumstances, or mediation through effects on another gene (or genes) at the locus.
DOI: 10.17632/ppg7fk8grk
title: Supply Chain Practices for Operational Performances

description: SCM has become one of the most important issues for researchers and industries in the recent past. It is used by different business organizations as a strategic resource for improving operational and organizational performance so as to create value for customers. SCM globally gives competitive edge to organizations, if implemented properly with right spirit.
DOI: 10.6084/m9.figshare.12672950.v1
title: Source data file for cardiomyocyte nucleus shape analysis

description: Size and shape values for each individual nucleus.
DOI: 10.6084/m9.figshare.16944029.v1
title: Self-regulation as rehabilitation outcome: what is important according to former patients?

description: Self-regulation refers to self-management and self-control, with or without disability. Outcomes of rehabilitation with respect to self-regulation are unclear. This study aims to identify elements of self-regulation that former patients consider important in the context of medical rehabilitation. Qualitative exploration based on focus group discussions (FGDs). Transcripts were analysed using thematic analysis as well as open coding. Forty individuals participated in seven diagnosis-related FGDs. Six subthemes were raised in the FGDs which could be merged into three main themes. Two main themes are conditional for regaining self-regulation: 1) having insight into one’s condition and abilities (i.e., insight into impairments. consequences of impairments. abilities); 2) to know how to cope with the consequences of the condition (be able to communicate limitations; have to trust in body and functioning). The subject of the last theme 3) is how to apply self-regulation in one’s own life (to make use of abilities and optimize functioning). Three main themes of self-regulation in the context of medical rehabilitation were identified by former patients, partly relating to the ability to self-regulate and partly to the execution of self-regulation. This knowledge can be used to define specific rehabilitation goals and further develop rehabilitation outcome measurement.IMPLICATIONS FOR REHABILITATIONAwareness of the fundamental subthemes of self-regulation in rehabilitation will positively contribute to theory building and improve clinical practice (e.g., goal setting).Paying explicit attention to the six subthemes as standard elements of rehabilitation will help to provide a comprehensive view concerning self-regulation.The conceptual model of self-regulation, based on patient perspectives, can contribute to the measurement of rehabilitation outcomes. Awareness of the fundamental subthemes of self-regulation in rehabilitation will positively contribute to theory building and improve clinical practice (e.g., goal setting). Paying explicit attention to the six subthemes as standard elements of rehabilitation will help to provide a comprehensive view concerning self-regulation. The conceptual model of self-regulation, based on patient perspectives, can contribute to the measurement of rehabilitation outcomes.
DOI: 10.6084/m9.figshare.19996651.v1
title: Comparison of Postoperative Outcomes of Sutureless versus Stented Bioprosthetic Aortic Valve Replacement

description: Abstract Objective: Sutureless aortic valve replacement (Su-AVR) offers an alternative to supra-annular stented biological aortic prostheses. This single-center study aimed to compare early outcomes after aortic valve replacement with sutureless and conventional stented bioprostheses. Methods: In this retrospective study, we analyzed 52 patients who underwent aortic valve replacement with sutureless and stented bioprostheses between January 2013 and October 2017. Sorin Perceval S sutureless valves were implanted in group 1 and Sorin Mitroflow stented bioprosthetic valves were used in group 2. Postoperative outcomes, including demographics, cardiopulmonary bypass (CPB) times, cross-clamp times, morbidity and mortality, as well as echocardiography in the first month, were compared. Results: Mortality occurred in 1 (3.6%) patient in group 1, and in 2 (8.3%) patients in group 2 (P=0.186). Group 1 had significantly shorter CPB (61.6±26.1 min vs. 106.3±32.7 min, P=0.001) and cross-clamp (30.9±13.6 min vs. 73.3±17.3 min, P=0.001) times. The length of stay in the intensive care unit (1.9±1.3 days vs. 2.4±4.9 days, P=0.598) and hospital stay (7.6±2.7 days vs. 7.3±2.6 days, P=0.66) were similar. Postoperatively, there was no statistically significant difference between the two groups in echocardiography results, and morbidities. The mean aortic valve gradient was 13.5±5.8 mmHg in group 1 and 14.5±8.0 mmHg in group 2 (P=0.634). Paravalvular regurgitation was diagnosed in 3 (10.7%) patients in group 1 and in 1 (4.2%) patient in group 2 (P=0.220). Conclusions: Su-AVR resulted in shorter cross-clamp and CPB times. However, early mortality, postoperative morbidity, and echocardiography results were similar between groups.
DOI: 10.6084/m9.figshare.4546834.v1
title: Tardigrades microbiome Scripts and data

description: Mothur and R commands used in the paper: "The microbial community of tardigrades: environmental influence and species-specificity of microbiome structure and composition"R working space containing a Phyloseq object with the OTU table, phylogenetic tree and taxonomy used.Fasta file containing a representative sequence for each OTU.
DOI: 10.6084/m9.figshare.5125918.v1
title: Supplementary Material for: Trends of the Incidence of Ischemic Stroke Thrombolysis over Seven Years and One-Year Outcome: A Population-Based Study in Joinville, Brazil

description: <b><i>Background:</i></b> In a population-based setting, we aimed to measure the incidence trends of ischemic stroke (IS) thrombolysis, thrombolysis times, proportion of symptomatic intracerebral hemorrhage (sICH), 30-day case fatality and functional outcomes. We also compared the 12-month functional status between thrombolyzed and nonthrombolyzed patients. <b><i>Methods:</i></b> Using data from the Joinville Population-Based Stroke Registry, we prospectively ascertained a cohort of all thrombolyses done in Joinville citizens, Southern Brazil, from 2005 to 2011. For the definition of sICH we used European Cooperative Acute Stroke Study (ECASS) II criteria. <b><i>Results:</i></b> Over 7 years, 6% (220/3,552) of all IS were thrombolyzed. The thrombolysis incidence increased from 1.4 [95% confidence interval (CI), 0.6-2.9] in 2005 to 9.8 (7.3-12.9) per 100,000 population in 2011 (p &lt; 0.0001). The thrombolysis incidence age-adjusted to the world population in 2011 was 11 (8.2-14.3) per 100,000. Only 30% (50/165) were thrombolyzed within 1 h of arrival at hospital. In 7 days, 6.4% (14/220) had sICH and 57% (8/14) of those died. In the 2009-2011 period, a favorable functional outcome [modified Rankin scale (mRS) 0-1] at 12 months among patients who received thrombolysis was more frequent [mRS 0-1; 36% (38/107)] than among patients who did not receive thrombolysis [mRS 0-1; 24% (131/544); p = 0.016]. The logistic regression showed that thrombolyzed IS patients had a more favorable outcome (mRS 0-1; HR 2.13; 95% CI, 1.2-3.7; p &lt; 0.016) than nonthrombolyzed patients. <b><i>Conclusion:</i></b> In a population setting of a middle income country, the thrombolysis incidence and outcomes were similar to those of other well-structured services. After 1 year, patients thrombolyzed in the 4.5-hour time window had a better outcome. More than proportions, rates provide additional information and could be used to benchmark services against others.
DOI: 10.6084/m9.figshare.2069334.v1
title: Isomorphism tables

description: Monte Carlo results for isomorphism and homology study
DOI: 10.17632/77tdmnmnr2
title: IPQ Igroup Presence Questionnaire responses for Virtual Reality Stimuli

description: 36 participants (14 female) aged between 19 to 26 (M=21.6, SD.166) responded to 14 items of Igroup Presence Questionnaire (T. Schubert, F. Friedmann, and H. Regenbrecht, 2001) after they engaged with 10 different VR applications through 12 sessions using an head mounted display system. Two of the applications were evaluated twice, at the beginning and at the end of the study. The applications were: BD Back to Dinasour Island - CryTech AFM Affected : The Manor - Fallen Planet Studios IE I Expect You To Die - Schell Games IM InMind - Luden.io / Nival SE 08:46 - 846 Studios AFC Affected : Carnival - Fallen Planet Studios EV Evade PL Pulse - Slick VR DL Don't let go- Skydome Studios GL G2A Land - G2A The responses are taken through a 5-point Likert scale. Negatively phrased items which are coded as [R] are already reverse coded in the provided dataset. T. Schubert, F. Friedmann, and H. Regenbrecht, “The experience of presence: Factor analytic insights,” Presence Teleoperators Virtual Environ., vol. 10, no. 3, pp. 266–281, 2001.
DOI: 10.6084/m9.figshare.11853387.v3
title: Australian Aerial Waterbird Survey Database

description: The Australian Aerial Waterbird Surveys (AWS) database stores temporal and spatial waterbird data on individual species, their breeding status and estimates of wetland area, collected during annual aerial surveys, extending back to 1983. The core methodology for these surveys has remained the same. The database includes three principal survey programs: The Eastern Australian Waterbird Survey, the National Waterbird Survey and surveys of the major wetland sites in the Murray-Darling Basin. Since 1983, the Eastern Australian Waterbird Survey has covered about a third of the continent each October, representing one of the larger and longer running biodiversity surveys in Australia, sampling wetland and waterbird communities across 2.7 million km2 of eastern Australia. In 2008, we did aerial surveys over most large wetlands across Australia during a period of two months. Since 2010, we have comprehensively surveyed all the major wetlands in the Murray-Darling Basin.<br>Waterbirds (including nests and broods) were counted from high-winged aircraft (e.g. Cessna 206) at 167–204 km hr-1 and a height of 30–46 m, within 150 m of the wetland‘s shoreline where waterbirds concentrated. A front-right observer (navigator) and a back-left observer independently record counts on audio recorders, with their combined counts making up a completed count. Counts are attributed on the recorder to a unique number for each wetland, and a geolocation, as well as the time of day the survey commenced. Also, the percent fullness (inundated area) of each wetland is estimated, relative to the mapped high water mark. All waterbirds are identified to species except those that cannot be consistently identified to species’ level from the air and were grouped: small grebes, small egrets, terns and small and large migratory wading birds (Charadriformes).<br>