cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/6z6bdxrkkb
title: Compositions of Soil, Sediment, and Water in SW Bangladesh

description: Samples of rice paddy soil, tidal channel sediment, and water were collected from five different sites in SW Bangladesh in May and November of 2016 and chemically analyzed to characterize element mobilities and the geochemical factors controlling them. Soil and sediment samples were found to have compositions similar to each other and to average upper continental crust. Disequilibrium partitioning of elements between solids and water or deionized water extracts was observed, although apparent partition coefficients mostly show the expected order of element mobilities. Solid compositions do not change seasonally while surface water compositions do, and little spatial variation was observed.
DOI: 10.6084/m9.figshare.24312436.v4
title: Data for current and historical resource nitrogen supply affects the eco-physiological traits and the ionome of a diazotrophic cyanobacterium.

description: Culture experiment using Dolichospermum UTEX 1444 long-term adapted to different N-supplies for 45 months. The long-term adapted and our stock Dolichosermum were grown across an N-supply gradient for 27 days. We measured cumulative biomass, N-fixation rates, P uptake rates, elemental stoichiometry (ionome), chlorophyll a, phycobilin pigment concentrations, cyanophycin concentrations, and photosynthetic efficiency.File structure:Readme file that explains the data and R code used to analyze the data and create the figures.Attributes files contain the units and descriptions of the column headings for the data generated.
DOI: 10.17632/94t5vz46rw
title: Dataset of endoscopic thyroidectomy via axillary-breast-shoulder approach: early experience of 42 cases

description: Endoscopic thyroidectomy (ET) is preferable to avoid a large and visible surgical scar on the neck and to reduce postoperative complication, since most patients in Indonesia present with large-sized thyroid nodules. We aim to evaluate and analyze surgical feasibility, safety, oncologic outcomes, and patient satisfaction of ET via axillary-breast-shoulder (ABS) approach. We hereby provide additional information regarding materials, methods and data related to our recent study published in Surgical Oncology. Patients’ characteristics were obtained from the medical record, including age, tumor size, and preoperative histological findings. Six months of postoperative period were taken to follow-up the complications and scar satisfaction. The data contained in this article support the feasibility, safety, oncologic outcomes, and patient satisfaction of ET via ABS approach.
DOI: 10.17632/mgyk958ttn
title: Scilab software package for the study of dynamical systems

description: Abstract This work presents a new software package for the study of chaotic flows and maps. The codes were written using Scilab, a software package for numerical computations providing a powerful open computing environment for engineering and scientific applications. It was found that Scilab provides various functions for ordinary differential equation solving, Fast Fourier Transform, autocorrelation, and excellent 2D and 3D graphical capabilities. The chaotic behaviors of the nonlinear dynamics syste... Title of program: Chaos Catalogue Id: AEAP_v1_0 Nature of problem Any physical model containing linear or nonlinear ordinary differential equations(ODE). Versions of this program held in the CPC repository in Mendeley Data AEAP_v1_0; Chaos; 10.1016/j.cpc.2008.01.002 AEAP_v2_0; Chaos v2.0; 10.1016/j.cpc.2009.07.005 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/wmwt7s2d8v
title: Medical Data Models

description: collection of medical data models from https://medical-data-models.org approximately 685,000 annotated data elements from &gt;24,000 data models
DOI: 10.6084/m9.figshare.26325805.v1
title: Supplementary Material for: White Matter Hyperintensities Are Associated with Slower Gait Speed in Older Adults Without Dementia

description: Background: Slow gait speed is associated with poor health outcomes in aging, but the relationship between cerebral small vessel disease (CSVD) pathologies and gait speed in aging is not well understood. We investigated the relationships between cerebral small vessel disease (CSVD) imaging markers and gait speed during simple (normal pace walking (NPW)) and complex (walking-while talking (WWT)) as both measures are associated with shared health outcomes such as falls, frailty, disability, mortality, and dementia. 
Methods: A total of 113 Ashkenazi Jewish adults over 65 (M age=78.6±6.3 years, 45.8% women) and without dementia were examined. Established rating systems were used to quantify white matter hyperintensities (WMH) and lacunes of presumed vascular origin from Fluid Attenuated Inversion Recovery (FLAIR) images. Linear regression models adjusted for age, sex, global health, and total intracranial volume were used to examine associations between CSVD markers and gait speed during NPW and WWT. Student t-tests were used to contrast gait speed in those with “confluent-diffuse” WMH and those with “mild or no” WMH. 
Results: The number of WMH in the basal ganglia (β=-3.274 cm/s p=.047) and temporal lobes (β=-3.113 cm/s p=.048) were associated with slower NPW speed in adjusted models. Participants with higher CSVD burden (confluent-diffuse pattern) in the frontal lobe (94.65 cm/s vs. 105.21 cm/s, p=.018) and globally (98.98 cm/s vs. 107.24 cm/s, p=.028) also had lower NPW speed. WMH were not associated with WWT speeds. Lacunes were not associated with NPW or WWT speed. 
Conclusion: Adjusted models found higher CSVD burden as measured by the presence of WMH in the basal ganglia and temporal lobes were associated with slower normal pace gait speed in older adults, but not with complex walking speeds. Participants with confluent-diffuse WMHs in the frontal lobes were found to have slower average normal gait speed. Further studies are needed to establish the temporality of WMH and gait speed decline as well as mechanistic links between the two.
DOI: 10.6084/m9.figshare.28359065.v1
title: <b>Forage maize type influences on methane emissions, nutrient degradation, and fermentation profiles in ruminants</b>

description: Supplementary dataset
DOI: 10.6084/m9.figshare.28726727.v1
title: Supplementary Table 6 Pan-cistromics analysis of selected genes and tissue origin of the ChIP-seq.xlsx

description: Supplemental data for: CCAAT/Enhancer-Binding Proteins α and β Regulate Ovulation and Gene Expression via Dose- and Stage-Dependent Mechanisms
DOI: 10.17632/47vxz3hg4w
title: Moderate thinning is more conducive to soil organic carbon stability of planted forests: a synthesis in China

description: This study synthesizes relevant data from 87 peer-reviewed publications across China.
DOI: 10.17632/4b2cf8hmp8
title: Divergent association between pain intensity and resting‐state fMRI‐based brain entropy in different age groups

description: This repository contains brain entropy maps and behavioral data used for the study: Del Mauro, G., Sevel, L. S., Boissoneault, J., & Wang, Z. (2024). Divergent association between pain intensity and resting‐state fMRI‐based brain entropy in different age groups. Journal of Neuroscience Research, 102(5), e25341.
DOI: 10.17632/pr6pk3xmsp
title: Database on space sails

description: Space sails are a continuum of lightweight, thin, large-area, deployable technologies which are pushing forward new frontiers in space mobility and exploration. They encompass solar sails, laser-driven sails, drag sails, magnetic sails, electric sails, deployable membrane reflectors, deployable membrane antennas, and solar power sails. This database contains values of important parameters from 220 different space sails, which have either flown in space or been proposed as mission concepts. The parameters are: the deployed sail area, the spacecraft's total mass, the total sail loading, the characteristic acceleration, the characteristic thrust, the sail's stowed volume, the sail packing efficiency, and the sail thickness. Assumptions and definitions used for each parameter are provided, along with links to the data sources.
DOI: 10.17632/wm3ys69v6y
title: Pentoxifylline treatment in dermatology: A systematic review

description: Pentoxifylline is a xanthine derivative approved for symptomatic treatment of claudication.​1​ Due to its hemorheological and anti-inflammatory properties, pentoxifylline has been applied in several dermatological diseases, especially vasculopathic and granulomatous disorders. This systematic review summarizes the evidence regarding this indication.
DOI: 10.17632/x5gfxgbrkt
title: Synthesis and inhibition of a high-effective and green corrosion inhibitor for N80 steel in hydrochloric acid solution

description: Synthesis and inhibition of a high-effective and green corrosion inhibitor for N80 steel in hydrochloric acid solution
DOI: 10.6084/m9.figshare.13344260.v1
title: Chick habitat use, growth rate, and survival data

description: This data was used to estimate habitat use, growth rates, foraging rates, and daily survival rates for piping plover chicks in New Jersey.
DOI: 10.6084/m9.figshare.16610476.v1
title: PV camera data.rar

description: Data of paper "Thermal Imaging Metrology Using High Dynamic Range Near-Infrared Photovoltaic-Mode Camera" published in Sensors journal
DOI: 10.17632/jcm2czdjfh
title: Fed Information Effects: Evidence form the Equity Term Structure

description: This document details the estimation of the main variables and the code to replicate tables and figures in the paper “Fed Information Effects: Evidence from the Equity Term Structure” by Benjamin Golez and Ben Matthies.
DOI: 10.6084/m9.figshare.14635452.v1
title: ephys data.7z

description: Electrophysiological recordings of control and Parkinson's disease iPSC-derived neurons
DOI: 10.6084/m9.figshare.16531338.v1
title: Supplementary Data.xlsx

description: fatty acids, amino acids, stable isotopes of mussels
DOI: 10.6084/m9.figshare.19074398.v1
title: Supplementary dataset.xlsx

description: Major, trace element and boron isotopes of tourmalines<br>
DOI: 10.6084/m9.figshare.9697451.v1
title: trainingData.rar

description: TAD and non-TAD image data used to train TAD recognition model.<br>After unzip the file, the folder tree structure is as the following:├── Human│ ├── ES│ │ ├── TAD│ │ └── non-TAD│ │ ├── 1.0│ │ ├── 1.5│ │ └── 2.0│ └── IMR90│ ├── TAD│ └── non-TAD│ ├── 1.0│ ├── 1.5│ └── 2.0└── Mouse ├── Cortex │ ├── TAD │ └── non-TAD │ ├── 1.0 │ ├── 1.5 │ └── 2.0 └── ES ├── TAD └── non-TAD ├── 1.0 ├── 1.5 └── 2.0
DOI: 10.17632/49tzcc8sf3
title: ModelFLOWs-app: Data-driven post-processing and reduced order modelling tools

description: This article presents an innovative open-source software named ModelFLOWs-app,1 written in Python, which has been created and tested to generate precise and robust hybrid reduced order models (ROMs) fully data-driven. By integrating modal decomposition and deep learning in diverse ways, the software uncovers the fundamental patterns in dynamic systems. This acquired knowledge is then employed to enrich the comprehension of the underlying physics, reconstruct databases from limited measurements, and forecast the progression of system dynamics. The hybrid ROMs produced by ModelFLOWs-app combine experimental and numerical databases, serving as highly accurate alternatives to numerical simulations. As a result, computational expenses are significantly reduced, and the models become powerful tools for optimization and control in various applications. The exceptional capability of ModelFLOWs-app in developing reliable data-driven hybrid ROMs has been demonstrated across a wide range of applications, making it a valuable resource for understanding complex nonlinear dynamical systems and providing insights in diverse domains. This article presents the mathematical background, as well as a review of some examples of applications.
DOI: 10.25375/uct.6993917.v1
title: EDUBASE - A bibliography of education for Black South Africans

description: EDUBASE is a database of educational information relating to the field of black education in South Africa, covering the period from the nineteenth century to 1992. The resources curated by the EDUBASE collection including books and book chapters, journal articles, conference papers and presentations, white papers and other forms of governmental and civil society documents. In total, EDUBASE includes nearly 9000 publications on the topic of education for black South Africans. A separate database inspired by EDUBASE focusing specifically on education in the Transkei was produced by David Hiscock, and has been added to this collection.<br> <br>The database was originally located on UCT's servers. Over time, it migrated formats several times, from floppy disks to stiffy disks, then to CD-ROMs, a flashdrive, and finally to cloud-based storage provided here on ZivaHub. The School of Education at UCT kindly allocated space for the project up to 1992, and the physical collection now resides at UCT Libraries Special Collections, as the 'BC1584 Edubase Collection'.<br> <br>This collection consists of the database files in MS Access format (EDUBASE_Kallaway.mdb and EDUBASE_Hiscock_Transkei.mbd), along with a list of keywords in .csv format, and a set of instructions on how to navigate the databases as a PDF. The database itself is searchable by keyword, author or date of publication. Open versions of both databases have also been added in .csv format. <br><br>The funding for the project was made possible by the authors of Apartheid and Education who agreed to donate their share of the royalties to a fund that was established for this purpose. Various people have worked on the EDUBASE over the years, including Jackie Kallaway, Deirdre Birch, Vera Hulley, David Hiscock and Debbie Sheward. Many thanks to them for making possible the development this invaluable tool for the advancement of research in this important area. <br><br>Thanks also go to Gary November of the UCT Digitisation unit, who digitised the cover of the original EDUBASE printout; Adrianna Pinska and Corne Oosthuizen for their support in migrating the content from the .mdb files to open .csv spreadsheets. <br><br>The references fields below contain links to Dr Peter Kallaway’s other publications on education for Black South Africans.<br>
DOI: 10.6084/m9.figshare.22691143.v2
title: Untitled Item

description: The MIDOG++ dataset represents an extension of the data set used in the MIDOG 2021 and 2022 challenges. We provide region of interest images from 503 histological specimens of seven different tumor types with variable morphology: breast carcinoma, lung carcinoma, lymphosarcoma, neuroendocrine tumor, cutaneous mast cell tumor, cutaneous melanoma, and (sub)cutaneous soft tissue sarcoma. The human and canine samples were processed and stained at different human and veterinary pathology laboratories with standard H&E dye and digitized with different digital whole slide image scanners. We provide labels for 11,937 mitotic figures that have been differentiated against 14,351 imposter cells in a blinded consensus by two pathologists and a final decision by a third pathologist for disagreed labels.
DOI: 10.6084/m9.figshare.24849936.v1
title: Raw data of the manuscript Foraging behavior of the ant <i>Ectatomma vizottoi</i>

description: Raw data of nest coordinates, times and distances of foraging, and prey size of the manuscript Foraging behavior of the ant <i>Ectatomma vizottoi</i>
DOI: 10.6084/m9.figshare.5241922.v1
title: Erratum: Society of Vascular and Interventional Neurology (SVIN) Stroke Interventional Laboratory Consensus (SILC) Criteria: A 7M Management Approach to Developing a Stroke Interventional Laboratory in the Era of Stroke Thrombectomy for Large Vessel Occlusions

description: Brain attack care is rapidly evolving with cutting-edge stroke interventions similar to the growth of heart attack care with cardiac interventions in the last two decades. As the field of stroke intervention is growing exponentially globally, there is clearly an unmet need to standardize stroke interventional laboratories for safe, effective, and timely stroke care. Towards this goal, the Society of Vascular and Interventional Neurology (SVIN) Writing Committee has developed the Stroke Interventional Laboratory Consensus (SILC) criteria using a 7M management approach for the development and standardization of each stroke interventional laboratory within stroke centers. The SILC criteria include: (1) manpower: personnel including roles of medical and administrative directors, attending physicians, fellows, physician extenders, and all the key stakeholders in the stroke chain of survival; (2) machines: resources needed in terms of physical facilities, and angiography equipment; (3) materials: medical device inventory, medications, and angiography supplies; (4) methods: standardized protocols for stroke workflow optimization; (5) metrics (volume): existing credentialing criteria for facilities and stroke interventionalists; (6) metrics (quality): benchmarks for quality assurance; (7) metrics (safety): radiation and procedural safety practices.
DOI: 10.6084/m9.figshare.5700991.v3
title: SAFT-MATLAB

description: This program iterates binary interaction coefficients for binary mixtures. It determines the AAD\% of thermodynamic properties of the mixtures with user-supplied experimental data (or data taken from DECHEMA).<br>Key scripts: <br>kijIter - Iterate kij values<br>gammaIter - Iterate gammaij values<br>VLEpure - Solves VLE for pure compounds - use to check validity of SAFT parameters<br><br>
DOI: 10.6084/m9.figshare.7908518.v1
title: gVCF_HG01917

description: 1000 Genomes gVCF mapped to hs37d5 for HG01917. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.17632/85njyhj45m
title: Data for: An evaluation of document clustering and topic modelling in two online social networks: Twitter and Reddit

description: Topic labelled online social network (OSN) data sets are useful to evaluate topic modelling and document clustering tasks. We provide three data sets with topic labels from two online social networks: Twitter and Reddit. To comply with Twitter’s terms and conditions, we only publish the tweet identifiers along with the topic label. The Reddit data is supplied with the full text and the topic label. The first Twitter data set was collected from the Twitter API by filtering for the hashtag #Auspol, used to tag political discussion tweets in Australia. The second Twitter data set was originally used in the RepLab 2013 competition and contains expert annotated topics. The Reddit data set consists of 40,000 Reddit parent comments from May 2015 belonging to 5 subreddit pages, which are used as topic labels.
DOI: 10.25403/upresearchdata.27980558.v1
title: Historical load shedding data for the City of Tshwane, 2015 to 2023

description: The historical, hourly, load shedding outage stages from 2015 to 2023 in the City of Tshwane, Gauteng in South Africa. This data is specifically for the following arears in Pretoria: 1) Hatfield, 2) Hillcrest, 3) Mamelodi, 4) Menlyn, 5) Onderstepoort, 6) Silver Lakes, and 7) Soshanguve. These regions represent a good balance between the affluent and historically disadvantaged communities in the municipality.
DOI: 10.6084/m9.figshare.13048478.v2
title: Pursuing behavior in humans

description: Behavioral data from the web-based experiment in humans (Choice task and Evaluation task).<br>The R data can analyzed with the scripts listed.
DOI: 10.6084/m9.figshare.14971611.v1
title: Young Academy of Europe (YAE) Survey on impact of COVID19

description: This is the raw data linking to a survey run by the YAE to assesss the impact of the lockdown on early stage academics (group leaders) working in Europe.
DOI: 10.6084/m9.figshare.20510367.v1
title: Zebrahub single cell dataset

description: Zebrahub first dataset is a single-cell RNA sequencing atlas a the single embryo resolution of nearly 120671 cells spanning 10 stage: from 0-somite embryos to 10 day larva (bud-, 5-, 10-, 15-, 20-, 30-somite stages, as well as 2-, 3-, 5- and 10-dpf). For each stage, we have at least 4 embryo replicates. We strive to achieve the highest possible quality; in that context, we expect the dataset to evolve to more stages and better data quality. This work is led by the Royer Lab in collaboration with CZ Biohub’s data science and sequencing platforms. It aims at providing a consistent and high-quality single-embryo resolved picture of development leveraging the latest single-cell technologies such as 10X Chromium (standard and HT) for library preparation and novaseq 6000 for sequencing. This dataset was produced in the context of upcoming preprints. In the spirit of open and accelerated science, we make this dataset available ahead of time and we require that redistribution of these data include the full text of the data release policy. <br> <strong>DATA RELEASE POLICY</strong> We aim to make sequence data rapidly and broadly available to the scientific community as a community resource. We intend to publish the work of this project in a timely fashion, and we welcome collaborative interaction on the project and analyses. However, considerable investment was made in generating these data, and we ask that you respect rights of first publication and acknowledgment as outlined in the Toronto agreement (Toronto International Data Release Workshop Authors. Prepublication data sharing. Nature. 2009 Sep 10;461(7261):168-70). By accessing these data, you agree not to publish any articles containing analyses of genes, cell types, or transcriptomic data on a whole atlas, tissue scale, or time point scale prior to the initial publication by the Chan Zuckerberg Biohub. If you wish to make use of restricted data for publication or are interested in collaborating on the analyses of these data, please email us or use the contact form. Redistribution of these data should include the full text of the data use policy.
DOI: 10.6084/m9.figshare.24203862.v1
title: Non-z-scored EEG summary data from 22q11.2DS sleep study

description: Non-z-scored dataset from 22q11.2DS sleep study publications, https://doi.org/10.7554/eLife.75482
DOI: 10.6084/m9.figshare.27050779.v1
title: Supplementary Table 2-1 to 2-17

description: Supplementary Tables for Chapter 2
DOI: 10.6084/m9.figshare.7873274.v2
title: Mtb and Msm PepNs share high degree of sequence identity.pdf

description: Mtb and Msm PepNs share high degree of sequence identity<br>
DOI: 10.17632/8bnhxrn6r9
title: Uncertainty, risk aversion and international trade

description: See paper for data sources and descriptions. Antoine Gervais, Uncertainty, risk aversion and international trade, Journal of International Economics, Volume 115, 2018, Pages 145-158, ISSN 0022-1996. https://doi.org/10.1016/j.jinteco.2018.09.001
DOI: 10.17632/9tb668v8r6
title: From Initial Formation to Developmental Refinement: GABAergic Inputs Shape Neuronal Subnetworks in the Primary Somatosensory Cortex

description: The calcium imaging data were obtained through two-photon awake imaging of the somatosensory cortex in developing mice from P11 to P21. Simultaneously, behavioral video recordings were collected from the experimental setup. The two modalities were synchronized using an LED signal at the start and end of the two-photon imaging experiment. Imaging data analysis was performed using Python or MATLAB, utilizing standard toolboxes, open-access toolboxes, and custom-written code.