cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21233/2pa1-z802
title: Cobb Valley CV1 pollen dataset

description: Raw data for the Cobb Valley CV1 pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.7910/dvn/dcczih
title: Bio_ClinicalBERT embeddings for ICD10 code descriptions

description: The ICD10 text descriptions are obtained from : https://ftp.cdc.gov/pub/Health_Statistics/NCHS/Publications/ICD10CM/2025-Update/ acessed on May 1, 2025

The embedding model is obtained from: https://huggingface.co/emilyalsentzer/Bio_ClinicalBERT/commit/d5892b39a4adaed74b92212a44081509db72f87b

The "pooled_output" for the text description of the ICD10 code is provided

The "trimmed" outputs are trimmed ICD10 codes to 3 digits. All codes which fall under the 3-digit category are averaged to get a representative embedding.
DOI: 10.15468/dl.cg7778
title: Occurrence Download

description: A dataset containing 2010 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coniopteris A.T.Brongniart, 1849"
 ]
}

 The dataset includes 2010 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023565-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/n800-r007
title: Cheng et al. 2020 Site 113 pollen surface sample dataset

description: Raw data for the Cheng et al. 2020 Site 113 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/1a2k-9j13
title: Dome Creek [AKLIV-VP] vertebrate fauna dataset

description: Raw data for the Dome Creek [AKLIV-VP] vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/kg96-0h66
title: Shafer diatom surface sample dataset

description: Raw data for the Shafer diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.x9he52
title: Occurrence Download

description: A dataset containing 5599 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rosa acicularis Lindl.",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2010",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5599 records from 144 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023566-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/qwxh-es35
title: Wuzhi Mountain ostracode surface sample dataset

description: Raw data for the Wuzhi Mountain ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.3886/e209804
title: Code for: Building Non-Discriminatory Algorithms in Selected Data

description: We develop new quasi-experimental tools to understand algorithmic discrimination and build non-discriminatory algorithms when the outcome of interest is only selectively observed. We first show that algorithmic discrimination arises when the available algorithmic inputs are systematically different for individuals with the same objective potential outcomes. We then show how algorithmic discrimination can be eliminated by measuring and purging these conditional input disparities. Leveraging the quasi-random assignment of bail judges in New York City, we find that our new algorithms not only eliminate algorithmic discrimination but also generate more accurate predictions by correcting for the selective observability of misconduct outcomes
description: Universe of arraignments in New York City between November 1, 2008 to November 1, 2013<br>. Smallest Geographic Unit: borough within New York City
DOI: 10.3886/e209804v1
title: Code for: Building Non-Discriminatory Algorithms in Selected Data

description: We develop new quasi-experimental tools to understand algorithmic discrimination and build non-discriminatory algorithms when the outcome of interest is only selectively observed. We first show that algorithmic discrimination arises when the available algorithmic inputs are systematically different for individuals with the same objective potential outcomes. We then show how algorithmic discrimination can be eliminated by measuring and purging these conditional input disparities. Leveraging the quasi-random assignment of bail judges in New York City, we find that our new algorithms not only eliminate algorithmic discrimination but also generate more accurate predictions by correcting for the selective observability of misconduct outcomes
description: Universe of arraignments in New York City between November 1, 2008 to November 1, 2013<br>. Smallest Geographic Unit: borough within New York City
DOI: 10.15468/dl.62eqvz
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Filoboletus gracilis (Klotzsch ex Berk.) Singer"
 ]
}

 The dataset includes 53 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023567-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/p3f8-2a50
title: Lake Erhai ostracode surface sample dataset

description: Raw data for the Lake Erhai ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/fgqd-h896
title: Lebel-G testate amoebae surface sample dataset

description: Raw data for the Lebel-G testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/tn9x-1903
title: LDDsite1935 water chemistry dataset

description: Raw data for the LDDsite1935 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/psac-0b89
title: LDDsite6546 ostracode surface sample dataset

description: Raw data for the LDDsite6546 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/f0r2-hj56
title: Bear Lake water chemistry dataset

description: Raw data for the Bear Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/vmae-7v38
title: Waterloo Lakes diatom bottom sample dataset

description: Raw data for the Waterloo Lakes diatom bottom sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/hqd1-hr77
title: Wildcat Canyon [35GM9] vertebrate fauna dataset

description: Raw data for the Wildcat Canyon [35GM9] vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/ynfr-8g80
title: LDDsite676 water chemistry dataset

description: Raw data for the LDDsite676 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/1c3d-x398
title: LDDsite2724 ostracode surface sample dataset

description: Raw data for the LDDsite2724 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/exkg-7041
title: Carbon River 3, WA pollen surface sample dataset

description: Raw data for the Carbon River 3, WA pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/s1va-qn28
title: Aegelsee pollen dataset

description: Raw data for the Aegelsee pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/t7kx-as77
title: Miles Pond diatom bottom sample dataset

description: Raw data for the Miles Pond diatom bottom sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/428q-g203
title: Elands Bay Cave pollen dataset

description: Raw data for the Elands Bay Cave pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/g97b-hg52
title: Scaredy Cat Cave [10MA143] vertebrate fauna dataset

description: Raw data for the Scaredy Cat Cave [10MA143] vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.9czppj
title: Occurrence Download

description: A dataset containing 788 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vaccinium hirtum Thunb.",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2010",
 "HasCoordinate is true"
 ]
}

 The dataset includes 788 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023568-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14370618
title: The System for Classification of Low-Pressure Systems (SyCLoPS) Dataset (Based on ERA5)

description: The "SyCLoPS_classifier.py" file is missing from this upload. Please see version 4 for a corrected record.
DOI: 10.5281/zenodo.14590898
title: The System for Classification of Low-Pressure Systems (SyCLoPS) Dataset (Based on ERA5)

description: This is the ERA5 System for Classification of Low-Pressure Systems (SyCLoPS) dataset version 4. Details of SyCLoPS algorithms are described in the paper titled The System for Classification of Low-Pressure Systems (SyCLoPS): An All-in-One Objective Framework for Large-scale Data sets published on J. Geophys. Res. Atm.: https://doi.org/10.1029/2024JD041287

We keep the most up-to-date version of the SyCLoPS user manual online at THIS PLACE. 

A newer version (version 5) has been published to fix defficiencies found in this version.

Here are the updates in this version:

(1) Adjusted the standard for marking extratropical transition (EXT) nodes in the SyCLoPS classified catalog to minimize the EXT time error compared to the records in the International Best Track Archive for Climate Stewardship (IBTrACS). Therefore, EXT nodes denoted in the Track_Info column are slightly different from the last version.

(2) Enhanced the SyCLoPS classifier Python program to allow the user to select a mode (to skip some parts of the procedures) and a data format option (about data frequency and availability) before running through the program.

(3) Added a sample input list file for TempestExtreme's (TE) DetectNodes.

The following resultant datasets are provided:



The input LPS catalog: "SyCLoPS_input.parquet"

The output classified LPS catalog: "SyCLoPS_classified.parquet"

The labeled size blobs of each year: "size_blobs_1979_2022.tar.gz"

The labeled precipitation blobs of each year: "preci_blobs_1979_2022.tar.gz"


The size and precipitation blob tag files each have 44 compressed nc files for each year. These detected blobs are not a part of the SyCLoPS framework. They are produced to demonstrate a potential application of SyCLoPS. For more details, please see the end of supporting information text S6 of the SyCLoPS paper and section 3.2 of the SyCLoPS user manual.The following script files are provided:



The SyCLoPS classifier: “SyCLoPS_classifier.py”

Blob-node pairing and LOWSIZE calculator: “Blob_idtag.py"

The shell script containing TE command lines: "TE_commands.sh"

Additional TE commands for tagging (masking) blobs: "TE_optional.sh"

A sample TE input file that contains a list of required ERA5 variable filenames: "DetectNodes_inputfile_example.txt"


Please contact Yushan Han (yshhan@ucdavis.edu) if you have questions about the SyCLoPS framework. Please contact Paul Ullrich (paullrich@ucdavis.edu) if you have any questions about the TE software.
DOI: 10.21233/4yrw-zf14
title: Clear Pond (E.L.) water chemistry dataset

description: Raw data for the Clear Pond (E.L.) water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/y7yq-wr39
title: Moss of Achnacree testate amoebae surface sample dataset

description: Raw data for the Moss of Achnacree testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.6urw8g
title: Occurrence Download

description: A dataset containing 4455663 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carabidae"
 ]
}

 The dataset includes 4455663 records from 3078 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023556-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/514-xk3-cmx
title: Conasprella mindana (Hwass, 1792)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9fc-3bf-p4z
title: Clypeomorus brevis (Quoy & Gaimard, 1834)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/21t-jxs-tmw
title: Antalis vulgaris (da Costa, 1778)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f6g-lrc-rsl
title: Harpago chiragra chiragra (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8t9-81b-rcb
title: Nassarius papillosus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vcj-bg5-9wb
title: Tornus subcarinatus (Montagu, 1803)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mbg-qav-1xm
title: Dorsanum miran (Bruguière, 1789)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3rs-9ww-wsq
title: Nassarius cinctellus (A. Gould, 1850)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yyc-w42-vwq
title: Paropeas acutissimum (Mousson, 1857)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qbv-xcl-hwv
title: Pinna carnea Gmelin, 1791

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wae-6vs-ekb
title: Nerita costata Gmelin, 1791

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.87u8j6
title: Occurrence Download

description: A dataset containing 3669289 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Asia",
 "Country is Korea, Republic of",
 "Geometry POLYGON((128.34866 38.63649,128.05637 38.23965,126.98462 38.28555,126.439 37.68658,124.93855 36.78679,125.32828 34.12057,127.66664 33.82969,129.69322 34.93928,130.33627 36.73996,128.34866 38.63649))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3669289 records from 146 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002708-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/2d1-bwm-lek
title: Conus thomae Gmelin, 1791

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cnq-9a3-cx1
title: Conus pertusus Hwass, 1792

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dc5-lrl-yas
title: Talparia talpa (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/56k-yc3-erk
title: Spondylus nicobaricus Schreibers, 1793

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/srs-5xj-tla
title: Oliva guttata Fischer von Waldheim, 1808

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2fe-dwh-6d3
title: Conus cedonulli Linnaeus, 1767

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dw6-0y2-ggj
title: Gyrineum natator (Röding, 1798)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/53l-9fc-8fk
title: Cantharidus lepidus (R. A. Philippi, 1849)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bme-qe9-j2l
title: Burnupena cincta limbosa (Lamarck, 1822)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hl6-k4j-zwl
title: Bullia digitalis (Dillwyn, 1817)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v6p-seh-brr
title: Conus musicus Hwass, 1792

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0sx-5sn-cfa
title: Alvania cimicoides (Forbes, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/177-sa2-sjq
title: Cerithium caeruleum G. B. Sowerby II, 1855

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h86-8dx-y4z
title: Strigilla mirabilis (R. A. Philippi, 1841)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7mw-ltq-5x9
title: Vitreolina curva (Monterosato, 1874)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tyz-km3-z62
title: Alvania cimex (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9bp-adr-exc
title: Tectus fenestratus (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b6v-nka-kgc
title: Tectus fenestratus (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0mx-nsq-grh
title: Planktomya henseni Simroth, 1896

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xtw-4fq-asb
title: Oxychilus alliarius (J. S. Miller, 1822)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3an-h1z-jh3
title: Tudorella melitensis (G. B. Sowerby I, 1843)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r2e-l3z-0vw
title: Gulella L. Pfeiffer, 1856

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jhp-xh2-ldk
title: Conasprella centurio (Born, 1778)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2lh-r7j-kd6
title: Striarca lactea (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.