cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1377547.10fu
title: SH1377547.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1377548.10fu
title: SH1377548.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1377558.10fu
title: SH1377558.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1377559.10fu
title: SH1377559.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1377560.10fu
title: SH1377560.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.8c5bsz
title: Occurrence Download

description: A dataset containing 3045599 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acanthopteroctetidae, Adelidae, Aenigmatineidae, Agathiphagidae, Aididae, Alucitidae, Andesianidae, Anthelidae, Apatelodidae, Archaeolepidae, Arctiidae, Argyresthiidae, Ascololepidopterigidae, Ashinagidae, Attevidae, Autostichidae, Batrachedridae, Bedelliidae, Blastobasidae, Bombycidae, Brachodidae, Brahmaeidae, Bucculatricidae, Callidulidae, Carposinidae, Carthaeidae, Castniidae, Cecidosidae, Choreutidae, Cimeliidae, Coleophoridae, Copromorphidae, Cosmopterigidae, Cossidae, Crambidae)",
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence, Material citation, Living Specimen)",
 "CoordinateUncertaintyInMeters is less than or equal to 10000",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3045599 records from 1108 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012625-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q92xsd
title: Occurrence Download

description: A dataset containing 368 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fuchsia macrostigma"
 ]
}

 The dataset includes 368 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014295-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rh7wvr
title: Occurrence Download

description: A dataset containing 448 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cardamine debilis"
 ]
}

 The dataset includes 448 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014297-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h5y8fq
title: Occurrence Download

description: A dataset containing 320 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Ensatina eschscholtzii croceater)"
 ]
}

 The dataset includes 320 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014296-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15683328
title: Easy genomic regions for short-read variant calling

description: Panmask easy regions:



pm151a.easy: excluding 151-mers occurring ≥1.01n times in the pangenome, where n is the number of genomes.

pm151b.easy: further excluding low-complexity regions (LCRs) longer than 18bp identified by SDUST

pm401a.easy: 401-mers. Not well evaluated.

pm401b.easy: excluding LCRs longer than 30bp


They exclude all assembly gaps and non-chromosomal contigs. See panmask for details.
DOI: 10.15468/dl.yj48yp
title: Occurrence Download

description: A dataset containing 899 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Draba helleriana"
 ]
}

 The dataset includes 899 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014298-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wfjzv7
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cryptopterus amboinensis"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014299-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.av59gv
title: Occurrence Download

description: A dataset containing 4165 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pennisetum purpureum)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4165 records from 257 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014300-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15186001
title: Ultrasensitive circulating tumor DNA detection improves prognostication in triple negative breast cancer post neoadjuvant chemotherapy

description: These data are in support of the publication "Ultrasensitive circulating tumor DNA detection improves prognostication in triple negative breast cancer post neoadjuvant chemotherapy" by Cabel et al.
DOI: 10.5281/zenodo.15324527
title: Ambient seismic noise data collected at the monumental gate of Porta Palio, Verona, Italy

description: This dataset contains the seismic data collected between November 2023 and April 2024 at the monumental gate of Porta Palio, Verona, Italy.

Single-station (P) ambient seismic noise data were collected along five WSW-ENE oriented alignments which cross perpendicularly the axis of the countermine tunnel beneath the monumental gate and are centered on it (Fig. 1). Forty-nine measurements (stations) were performed at the site: Profile 1 comprises 23 stations spaced 0.5 m apart (P1-P23), Profile 2 and Profile 3 each comprise 5 stations spaced 1 m apart (P24-P28 and P32-P36, respectively); two other alignments (only alignments with at least 5 stations are called profiles) each comprise 3 stations spaced 1 m apart (P29-P31 and P37-P39); the remaining stations were acquired before and after Profile 1, aligned to it. 

Data were collected using a digital tromograph (Tromino® model ENGY). This is a compact, ultralight, integrated device, with a compact 3-directional, 24-bit digital seismometer (MoHo s.r.l., 1 dm3 volume, 1 kg weight), including sensors and the data acquisition system. The system works at frequencies down to 0.3 Hz. This seismograph is also equipped with three orthogonal electrodynamic sensors (velocimeters), and is powered by two 1.5 V AA batteries. It also has an internal GPS antenna and does not have any external cables. 

During all measurements the seismometer’s major axis was aligned with the minor axis of the monumental gate, i.e. along the ENE-WSW direction. The seismometer was placed on the pavement using 3 short spikes screwed into the base of the unit, of the type used for recording inside buildings or on hard rock, without any penetration. This ensured good mechanical coupling. The seismometer was levelled and then seismic noise data acquired as 20-minute traces sampled at 1024 Hz.

The data are presented in ASCII format files. The recordings of each channel were saved all together in the same file. Information about each file was printed on the header of the same file.

 

Acknowledgements

The author is grateful to Società Mutuo Soccorso Porta Palio in the person of Michelangelo Pivetta for allowing to access and sample the test site and for providing the highly reliable metric survey of the architectural structure and the countermine tunnel, to Michelangelo Pivetta and Marcello Verdolin for their support in data collection and to Sandro Parrinello, Francesca Picchio, Anna Dell’Amico and Francesca Galasso who carried out the metric survey.
DOI: 10.5281/zenodo.15388205
title: T Cell Repertoire Correlates with Cytokine Imbalance in Multiple Sclerosis Patients

description: Background and Objective: Multiple sclerosis (MS) is mediated by innate and adaptive immune response deviation involving immune cells and cytokines. Here, we investigated whether combined cytokine profiling and T cell receptor (TCR) repertoire analysis can better display the complex landscape of MS-driving immune responses.

Methods: We used advanced computational methods to systematically cluster highly variable individual levels of 48 cytokines in cerebrospinal fluid (CSF) and blood of 24 MS patients compared to nine controls. Relevant TCR sequences were compared to 88 healthy controls. We correlated cytokines with predominant shared TCR sequences to identify immune response networks.

Results: MS patients had significantly elevated MIP-1a and IP-10 levels in CSF, and additional 36 blood cytokines variably but significantly elevated. We identified 77 predominantly pro-inflammatory cytokine correlations in MS-CSF. TCR sequencing revealed more productive rearrangements in CSF of MS and a significantly higher shared clone recovery rate in blood. We found significant associations involving 492 unique sequences and 34 cytokines in blood. Particularly the less significant individual cytokine deviations were found to contribute to a general Th1-biased type I immune response correlating with clonal expansion of T cells directed against EBV, CMV and other infectious agents.

Conclusion: Correlation of significantly altered T cell repertoire with cytokine deviations in MS despite individual patient data variability indicating that future diagnostic strategies may need to address immune response patterns rather than individual protein targets

We provide here the clone counts (Immunarch export from TCR sequencing) for control and MS patients.
DOI: 10.15468/dl.dwcrhm
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lantana camara",
 "Country is Cambodia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014303-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6gxnsp
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lantana camara",
 "Country is Burundi",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014302-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5vuyru
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lantana camara",
 "Country is Cameroon",
 "HasCoordinate is true"
 ]
}

 The dataset includes 86 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014304-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15889206
title: Nonreciprocal surface plasmonic neural network for decoupled bidirectional analogue computing

description: Image processing based on matrix-vector multiplication, edge detection and region integration, and data
DOI: 10.15468/dl.2s967t
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((104.6373 0.9209,191.66238 0.9209,191.66238 87.71576,104.6373 87.71576,104.6373 0.9209))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mesoplodon stejnegeri"
 ]
}

 The dataset includes 73 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014307-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bbne48
title: Occurrence Download

description: A dataset containing 2292 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Ensatina eschscholtzii eschscholtzii)"
 ]
}

 The dataset includes 2292 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014306-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.435abb
title: Occurrence Download

description: A dataset containing 32187252 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 32187252 records from 3920 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014262-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2qnpfj
title: CCDC 2522328: Experimental Crystal Structure Determination

description: Related Article: Shi-Cun Li, Shu-Qian Wang, Ming-Si Feng, Ao Li, Zhi-Chao Chen, Wei Du, Ying-Chun Chen|2026|Org.Lett.|||doi:10.1021/acs.orglett.6c00158
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qq1zh
title: CCDC 2523647: Experimental Crystal Structure Determination

description: Related Article: Chen Liang-Ting, Yuan Liu, Zhao Jian-She||J.Solid State Chem.|358||doi:10.1016/j.jssc.2026.125883
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2phkh8
title: CCDC 2487610: Experimental Crystal Structure Determination

description: Related Article: S. Navitha, A. S. W. Wilfred Raj, S. Sree Brindha, M. Ravi, F. Dallemer, G. Prabusankar, R. Prabhakaran|2026|Dalton Trans.|||doi:10.1039/d5dt02830b
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2phk81
title: CCDC 2487603: Experimental Crystal Structure Determination

description: Related Article: S. Navitha, A. S. W. Wilfred Raj, S. Sree Brindha, M. Ravi, F. Dallemer, G. Prabusankar, R. Prabhakaran|2026|Dalton Trans.|||doi:10.1039/d5dt02830b
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2phk92
title: CCDC 2487604: Experimental Crystal Structure Determination

description: Related Article: S. Navitha, A. S. W. Wilfred Raj, S. Sree Brindha, M. Ravi, F. Dallemer, G. Prabusankar, R. Prabhakaran|2026|Dalton Trans.|||doi:10.1039/d5dt02830b
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2phkc4
title: CCDC 2487606: Experimental Crystal Structure Determination

description: Related Article: S. Navitha, A. S. W. Wilfred Raj, S. Sree Brindha, M. Ravi, F. Dallemer, G. Prabusankar, R. Prabhakaran|2026|Dalton Trans.|||doi:10.1039/d5dt02830b
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6092/unibo/amsacta/8558
title: TheGAME. Bosnian-Croatian Border. 2024. Roberta Gentili. Fieldwork. V1

description: This dataset contains interviews and pictures collected by Roberta Gentili during her fieldwork on the Bosnian-Croatian border within the Horizon Europe ERC project “TheGAME” in 2024.
DOI: 10.5517/ccdc.csd.cc2qx4xq
title: CCDC 2529504: Experimental Crystal Structure Determination

description: Related Article: Haohao Bai|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17870/bathspa.11618085
title: Sei Sonate per il Cembalo: Sonata IV

description: Keyboard
DOI: 10.17870/bathspa.11618085.v1
title: Sei Sonate per il Cembalo: Sonata IV

description: Keyboard