cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.14470/ua114590
title: Hungarian National Infrasound Network

description: The Hungarian National Infrasound Network (HNIN) is a permanent infrasound network operated by the Kövesligethy Radó Seismological Observatory (Geodetic and Geophysical Institute, Research Centre for Astronomy and Earth Sciences, Hungarian Academy of Sciences). The main purpose of the network is the continuous monitoring of seismo-acoustic events in Hungary and to provide high quality data for the seismological and geodynamic scientific research. The first infrasound array of the HNIN started its operation in 2017. Currently the network consists of one four-element array equipped with microbarographs. The PSZI infrasound array is co-located with a seismic three-component broadband station, PSZ, operated by the Hungarian National Seismological Network (HNSN). All data are acquired in real-time to the HNIN data centre located at the Kövesligethy Radó Seismological Observatory in Budapest that also operates HNSN. The HNSN/HNIN follows an open data policy, as seismic and infrasound waveform data are available in real time without any restriction within from the HNSN/HNIN data centre as well as from the European Integrated Data Archive via the GEOFON data centre.
DOI: 10.25420/britishmuseum.30647048
title: Lê Thái Hoàng Nguyên consent form

description: Consent form for research assistant Lê Thái Hoàng Nguyên
DOI: 10.25420/britishmuseum.30647048.v1
title: Lê Thái Hoàng Nguyên consent form

description: Consent form for research assistant Lê Thái Hoàng Nguyên
DOI: 10.15468/dl.66vahs
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lonchocarpus nitidus"
 ]
}

 The dataset includes 78 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007827-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qtp8cu
title: Occurrence Download

description: A dataset containing 4549973 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "Year is 1989"
 ]
}

 The dataset includes 4549973 records from 653 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007789-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14470/jz581150
title: The Western Mediterranean BB seismic Network

description: The Western Mediterranean Network (WM) is a regional seismological broad-band network deployed around the Ibero-Maghrebian area as a collaboration between two Spanish institutions, the San Fernando Royal Naval Observatory (ROA) and the Universidad Complutense de Madrid (UCM), being daily operated by ROA. The first WM station (SFUC) was installed by ROA and UCM in 1996 with the collaboration of the Helmholtz-Zentrum Potsdam Deutsches GeoForschungsZentrum (GFZ). WM code was assigned in 2005 by FDSN. The WM seismic network was created to provide high quality broad-band data for scientific use and contribute to national and international data centres for seismic monitoring. Since 1996 other partners came to WM net: GFZ, the Universidade de Evora (UEVORA, Portugal) and the Institute Scientifique of RABAT (ISRABAT, Morocco). The network has evolved towards real-time data acquisition and distribution between partners and other institutions while keeping the high quality broad-band data in focus, playing a leading role in the Ibero-Maghrebian seismic studies, providing valuable data for almost all fundamental and applied regional seismological research joint projects at ROA, UCM, the other WM partners, and other institutes. The standard stations are equipped with broad-band sensors (generally STS-2 or STS-2.5, although two of them have installed Guralp sensors) that allow resolution of the complete seismic spectrum from small high-frequency local earthquakes to the largest global earthquakes, high resolution digitizers (Quanterra or Earthdata), and SeisComP with seedlink software for real-time communications. Also, some stations are equipped with accelerometers (Episensor) and also a permanent geodetic GPS are co-installed at the same places.
DOI: 10.48329/81hv-z098
title: CPRD Gold December 2025

description: The CPRD Gold database contains longitudinal routinely-collected electronic health records (EHR) from UK primary care practices using Vision® general practice patient management software. The database captures information on demographic characteristics; diagnoses and symptoms; drug exposures; vaccination history; laboratory tests; and referrals to hospital and specialist care.
description: Access to anonymised data from CPRD is subject to a full licence agreement containing detailed terms and conditions of use. Anonymised patient datasets can be extracted for researchers against specific study specifications, following protocol approval via CPRD's Research Data Governance Process. Further information is available at https://www.cprd.com/data-access.
description: Please contact enquiries@cprd.com for further information or if you have any questions.
DOI: 10.25420/britishmuseum.30647015
title: Thanh Sơn Nguyễn consent form

description: Consent form for research assistant Thanh Sơn Nguyễn
DOI: 10.25420/britishmuseum.30647015.v1
title: Thanh Sơn Nguyễn consent form

description: Consent form for research assistant Thanh Sơn Nguyễn
DOI: 10.15468/dl.6vpraz
title: Occurrence Download

description: A dataset containing 1130115 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ceramiales"
 ]
}

 The dataset includes 1130115 records from 1035 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007800-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.mf1pp3r
title: Data from: Reticulate evolution helps explain apparent homoplasy in floral biology and pollination in baobabs (Adansonia; Bombacoideae; Malvaceae)

description: Baobabs (Adansonia) are a cohesive group of tropical trees with a disjunct
 distribution in Australia, Madagascar, and continental Africa, and diverse
 flowers associated with two pollination modes. We used custom targeted
 sequence capture in conjunction with new and existing phylogenetic
 comparative methods to explore the evolution of floral traits and
 pollination systems while allowing for reticulate evolution. Our analyses
 suggest that relationships in Adansonia are confounded by reticulation,
 with network inference methods supporting at least one reticulation event.
 The best supported hypothesis involves introgression between A. rubrostipa
 and core Longitubae, both of which are hawkmoth pollinated with yellow/red
 flowers, but there is also some support for introgression between the
 African lineage and Malagasy Brevitubae, which are both mammal-pollinated
 with white flowers. New comparative methods for phylogenetic networks were
 developed that allow maximum-likelihood inference of ancestral states and
 applied to study the apparent homoplasy in floral biology and pollination
 mode seen in Adansonia. This analysis supports a role for introgressive
 hybridization in morphological evolution even in a clade with highly
 divergent and geographically widespread species. Our new comparative
 methods for discrete traits on species networks are implemented in the
 software PhyloNetworks.
description: <strong>Supplementary
 Tables and Figures:</strong>   FigureS1.AssemblyPipeline.pdf FigureS2.HaplotypeHeatmap.png FigureS3.SVDQ.pdf FigureS4.HH_Networks.pdf FigureS5.TaxonSelectionNetworks.pdf FigureS6.PlastidTrees.pdf FigureS7.ase.pdf TableS1.Accessions.xlsx TableS2.PlastomeAssembly.xlsx TableS3.ModelSummary.xlsx Data Files: Data_S1.TargetedSequenceCaptureBaits.Adansonia.fasta   primary_dataset_372.nexus.tar - Nexus alignments for the primary dataset of 372 genes   372_MLtrees.tar - RAxML gene trees from primary dataset used for the phylogenetic comparative methods. Branch lengths in substitutions/site were used calculate pair-wise genetic distances between taxa to calibrate the primary networks   HapHunt_subsets.nexus.tar - Nexus alignments for the haplotype datasets
DOI: 10.5061/dryad.07q5s3b
title: Data from: Random Tanglegram Partitions (Random TaPas): an Alexandrian approach to the Cophylogenetic Gordian Knot

description: Symbiosis is a key driver of evolutionary novelty and ecological
 diversity, but our understanding of how macroevolutionary processes
 originate extant symbiotic associations is still very incomplete.
 Cophylogenetic tools are used to assess the congruence between the
 phylogenies of two groups of organisms related by extant associations. If
 phylogenetic congruence is higher than expected by chance, we conclude
 that there is cophylogenetic signal in the system under study. However,
 how to quantify cophylogenetic signal is still an open issue. We present a
 novel approach, Random Tanglegram Partitions (Random TaPas) that applies a
 given global-fit method to random partial tanglegrams of a fixed size to
 identify the associations, terminals and nodes that maximize phylogenetic
 congruence. By means of simulations, we show that the output value
 produced is inversely proportional to the number and proportion of
 cospeciation events employed to build simulated tanglegrams. In addition,
 with time-calibrated trees, Random TaPas is also efficient at
 distinguishing cospeciation from pseudocospeciation. Random TaPas can
 handle large tanglegrams in affordable computational time and incorporates
 phylogenetic uncertainty in the analyses. We demonstrate its application
 with two real examples: Passerine birds and their feather mites, and
 orchids and bee pollinators. In both systems, Random TaPas revealed low
 cophylogenetic signal, but mapping its variation onto the tanglegram
 pointed to two different coevolutionary processes. We suggest that the
 recursive partitioning of the tanglegram buffers the effect of
 phylogenetic nonindependence occurring in current global-fit methods and
 therefore Random TaPas is more reliable than regular global-fit methods to
 identify host-symbiont associations that contribute most to cophylogenetic
 signal. Random TaPas can be implemented in the public-domain statistical
 software R with scripts provided herein. A User’s Guide is also available
 at GitHub.
description: <b>Supplementary Figures and Tables</b>
 suppFigsTables.pdf  
 <b>Simulation data</b> Library of
 tanglegrams and sets used for simulations
 SupMat_simData.zip  
 <b>Bird_mite_example</b>
 Phylogenetic trees, association matrix and R script to perform
 the bird-mite example  
 <b>Orchid_bee_example</b>
 Phylogenetic trees, association matrix and R script to carry out
 the orchid-bee example orchid_bees.zip
   <b>Normalized Gini
 Coefficient</b> Normalized Gini coefficient of a
 uniform random distribution centered at zero
 Supplementary Material Gini.pdf
DOI: 10.5061/dryad.vq43jv1
title: Data from: The influence of the fetal leg position on the outcome in vaginally intended deliveries out of breech presentation at term – a FRABAT prospective cohort study

description: Introduction: Vaginal delivery out of a breech presentation in pregnancies
 at term are being re-implemented into clinical practice. Still,
 recommendations regarding exclusion criteria leading to caesarean sections
 are based on expert opinions, not on evidence based guidelines. The
 difference in perinatal outcome and course of delivery in births with
 babies in frank breech position and babies in incomplete or complete
 breech presentation never has been investigated in a large patient cohort.
 Objective: To compare perinatal outcome of vaginally intended breech
 deliveries between births out of frank breech position and
 incomplete/complete breech presentation. Design: Prospective cohort study
 Sample: 884 women at term with a singleton in frank breech presentation
 (FB) and 284 women with incomplete or complete breech presentation (CB)
 intending vaginal birth between January 2004 and December 2018 Methods:
 Maternal and fetal outcome was compared between groups using Pearson’s Chi
 Square test. Birth duration parameters were analysed using logistic
 regression. Results: There were no differences in cesarean section rates
 (FB: 25.1%, CB 22.2%, p=0.317). Short-term fetal morbidity did not differ
 between groups (FB: 2.5%, CB: 2.8%, p=0.761). In vaginal deliveries the
 necessity to perform manual assistance was significantly more frequent in
 deliveries of infants in CB (FB: 39.9%, CB: 51.6%, p= 0.0013). Cord loops
 (FB: 10.1%, CB: 18.0%, p=0.0004) and cesarean sections necessary because
 of cord prolapses (FB: 1.4%, CB 8.1%, p=0.005) were significantly more
 often in deliveries with babies in CB. Conclusion: This study provides
 evidence, that perinatal morbidity is not associated with the fetal leg
 posture in vaginally intended breech deliveries. The higher risk for the
 need of manual assistance during vaginal birth in deliveries of babies out
 of complete or incomplete breech presentation suggests that obstetrical
 departments reimplementing the vaginal breech in their repertoire might
 start with births of babies out of frank breech presentation.
description: Breech_Leg-Posture_FRABATDataset of deliveries and feto-maternal outcome in vaginally intended breech deliveries.
DOI: 10.5061/dryad.gb89p60
title: Data from: Phenotypic plasticity of senescence in Daphnia under predation impact: No ageing acceleration when the perceived risk decreases with age

description: Recognizing the nature of the predation risk, and responding to it
 accurately, is crucial to fitness. Yet, even the most accurate adaptive
 responses to predation risk usually entail costs, both immediate and
 lifelong. Rooting in life history theory, we hypothesize that an animal
 can perceive the nuances of prey size and age selectivity by the predator
 and modulate its life history accordingly. We test the prediction that –
 contrary to the faster or earlier senescence under predation risk that
 increases with prey size and age – under predation risk that decreases
 with prey size and age, either no senescence acceleration or even its
 deceleration are to be observed. We use two species of indeterminate
 growers, small crustaceans of the genus Daphnia, D. pulex and D. magna, as
 the model prey, and their respective gape-limited invertebrate predators,
 a dipteran, midge larva Chaoborus flavicans, and a notostracan, tadpole
 shrimp Triops cancriformis. We analyse age-specific survival, mortality
 and fertility rates, and find no senescence acceleration, as predicted.
 With this study, we complete the picture of the expected non-consumptive
 phenotypic effects of perceived predation pressure of different
 age-dependence patterns.
description: Phenotypic
 Data
DOI: 10.5061/dryad.1t0s20m
title: Data from: Tropical arboreal ants form dominance hierarchies over nesting resources

description: Interspecific dominance hierarchies have been widely reported across
 animal systems. High-ranking species are expected to monopolize more
 resources than low-ranking species via resource monopolization. In some
 ant species, dominance hierarchies have been used to explain species
 coexistence and community structure. However, it remains unclear whether
 or in what contexts dominance hierarchies occur in tropical ant
 communities. This study seeks to examine whether arboreal twig-nesting
 ants competing for nesting resources in a Mexican coffee agricultural
 ecosystem are arranged in a linear dominance hierarchy. We described the
 dominance relationships among 10 species of ants and measured the
 uncertainty and steepness of the inferred dominance hierarchy. We also
 assessed the orderliness of the hierarchy by considering species
 interactions at the network level. Based on the randomized Elo-rating
 method, we found that the twig-nesting ant species Myrmelachista mexicana
 ranked highest in the ranking, while Pseudomyrmex ejectus was ranked as
 the lowest in the hierarchy. Our results show that the hierarchy was
 intermediate in its steepness, suggesting that the probability of higher
 ranked species winning contests against lower ranked species was fairly
 high. Motif analysis and significant excess of triads further revealed
 that the species networks were largely transitive. This study highlights
 that some tropical arboreal ant communities organize into dominance
 hierarchies.
description: Competition experiment
 twigant dataThe total number of
 replications for each of the pairs of ant species. The tab “Table for
 supplement” includes a matrix showing the number of trials for each pair,
 and two columns showing species name and total number of trials for that
 species.RealEstateReps
 .xlsxspeciespairsTwo columns including species pair combination and number of replicates used to draw histogramTwig-nesting arboreal antsMatrix format of competition trials to generate competitive network.twigants.csvArboreal antsR scripts to calculate dominance rankings, interaction networks, tables and histograms.
DOI: 10.5061/dryad.396gg1t
title: Data from: Linking coordinated hydraulic traits to drought and recovery responses in a tropical montane cloud forest

description: Understanding plant hydraulic functioning and water balance during drought
 has become key in predicting species survival and recovery. However, the
 insightful studies that couple physiological and morphological attributes
 do not exist in many ecosystems, such as the vulnerable Tropical Montane
 Cloud Forests (TMCF). In this study, we evaluate drought resistance and
 recovery for saplings for five tree species spanning deciduous to
 evergreen habits from a Mexican TMCF. Methods Drought treatments withheld
 water until plants reached species-specific P50 or P88 values (pressures
 required to induce a 50 or 88 percent loss in hydraulic conductivity), at
 which point they were rewatered. Drought resistance were considered within
 the isohydric-anisohydric framework and compared to leaf gas exchange,
 water status, pressure-volume curves, specific leaf area, and stomatal
 density. Results TMCF species closed stomata well before significant
 losses in hydraulic conductivity (isohydric). Yet, despite the
 coordination of these traits, they did not predict how long it took
 species to reach critical hydraulic thresholds. Instead, maximum
 photosynthesis rates explained these times reinforcing the linkage between
 hydraulic and carbon dynamics. Despite varying hydraulic conductivities,
 stomatal responses, and times to hydraulic thresholds, all study plants
 except for two individuals (out of 60) recovered following rewatering. The
 recovery of photosynthesis and stomatal conductance was explained by the
 P50 values and isohydry. Conclusions This study raises new questions
 surrounding drought management strategies, recovery processes, and how
 lethal thresholds are defined. Further studies need to consider the role
 of water and carbon balance in allowing for both survival and recovery to
 drought.
description: vc_dataData used to construct hydraulic vulnerability curves.WP.through.exptbranch water potentials by time through the duration of the experiment.species_summaryspecies mean values for regression comparisonsgs_wpStomatal conductance with paired water potential values
DOI: 10.5061/dryad.908jf3r
title: Data from: Functional divergence of the bitter receptor TAS2R38 in Sulawesi macaques

description: Bitter perception is mediated by G protein-coupled receptors TAS2Rs and
 plays an important role in avoiding the ingestion of toxins by inducing
 innate avoidance behavior in mammals. One of the best-studied TAS2Rs is
 TAS2R38, which mediates the perception of the bitterness of synthetic
 phenylthiocarbamide (PTC). Previous studies of TAS2R38 have suggested that
 geographical separation enabled the independent divergence of bitter taste
 perception. The functional divergence of TAS2R38 in allopatric species has
 not been evaluated. We characterized the function of TAS2R38 in four
 allopatric species of Sulawesi macaques on Sulawesi Island. We found
 variation in PTC taste perception both within and across species. In most
 cases, TAS2R38 was sensitive to PTC, with functional divergence among
 species. We observed different truncated TAS2R38s that were not responsive
 to PTC in each species of Macaca nigra and M. nigrescens due to premature
 stop codons. Some variants of intact TAS2R38 with an amino acid
 substitution showed low sensitivity to PTC in M. tonkeana. Similarly, this
 intact TAS2R38 with PTC-low sensitivity has also been found in humans. We
 detected a shared haplotype in all four Sulawesi macaques, which may be
 the ancestral haplotype of Sulawesi macaques. In addition to shared
 haplotypes among Sulawesi macaques, other TAS2R38 haplotypes were
 species-specific. These results implied that the variation in TAS2R38
 might be shaped by geographical patterns and local adaptation.
description: Sulawesi.2019.Functional
 Assay Raw Data 190315Functional analysis of
 TAS2R38
DOI: 10.5061/dryad.g22g0dg
title: Data from: Dogs perceive and spontaneously normalise formant-related speaker and vowel differences in human speech sounds

description: Domesticated animals have been shown to recognise basic phonemic
 information from human speech sounds and to recognise familiar speakers
 from their voices. However, whether animals can spontaneously identify
 words across unfamiliar speakers (speaker normalisation) or spontaneously
 discriminate between unfamiliar speakers across words remains to be
 investigated. Here, we assessed these abilities in domestic dogs using the
 habituation-dishabituation paradigm. We found that while dogs habituated
 to the presentation of a series of different short words from the same
 unfamiliar speaker, they significantly dishabituated to the presentation
 of a novel word from a new speaker of the same gender. This suggests that
 dogs spontaneously categorised the initial speaker across different words.
 Conversely, dogs who habituated to the same short word produced by
 different speakers of the same gender significantly dishabituated to a
 novel word, suggesting that they had spontaneously categorised the word
 across different speakers. Our results indicate that the ability to
 spontaneously recognise both the same phonemes across different speakers,
 and cues to identity across speech utterances from unfamiliar speakers, is
 present in domestic dogs and thus not a uniquely human trait.
description: Duration of attentional
 response "Root-Gutteridge_-_Dogs_speech_discrimination_abilities_Condition_1_and_2_data_Final.xlsx" This is a dataset that contains the duration data measurements for each trial with demographic information for each dog. VTL calculator This is the Vocal-Tract Length calculator used to calculate the length of the speakers' vocal tract lengths.