cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.17091387.v1
title: Blood-based traumatic brain injury biomarkers – Clinical utilities and regulatory pathways in the United States, Europe and Canada

description: Traumatic brain injury (TBI) is a major global health issue, resulting in debilitating consequences to families, communities, and health-care systems. Prior research has found that biomarkers aid in the pathophysiological characterization and diagnosis of TBI. Significantly, the FDA has recently cleared both a bench-top assay and a rapid point-of-care assays of tandem biomarker (UCH-L1/GFAP)-based blood test to aid in the diagnosis mTBI patients. With the global necessity of TBI biomarkers research, several major consortium multicenter observational studies with biosample collection and biomarker analysis have been created in the USA, Europe, and Canada. As each geographical region regulates its data and findings, the International Initiative for Traumatic Brain Injury Research (InTBIR) was formed to facilitate data integration and dissemination across these consortia. This paper covers heavily investigated TBI biomarkers and emerging non-protein markers. Finally, we analyze the regulatory pathways for converting promising TBI biomarkers into approved <i>in-vitro</i> diagnostic tests in the United States, European Union, and Canada. TBI biomarker research has significantly advanced in the last decade. The recent approval of an iSTAT point of care test to detect mild TBI has paved the way for future biomarker clearance and appropriate clinical use across the globe.
DOI: 10.6084/m9.figshare.7654277
title: Additional file 1: of Physiological and iTRAQ-based proteomic analyses reveal the function of exogenous Îł-aminobutyric acid (GABA) in improving tea plant (Camellia sinensis L.) tolerance at cold temperature

description: Table S1: Nucleotide sequences of primers specific to flavonoid biosynthesis, amino acid metabolism and AsA/glutathione cycle, TCA cycle, glyoxylate cycle and carbon fixation in photosynthetic organisms and oxidative pentose phosphate pathway and purine metabolism related genes used for qRT-PCR. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7654277.v1
title: Additional file 1: of Physiological and iTRAQ-based proteomic analyses reveal the function of exogenous Îł-aminobutyric acid (GABA) in improving tea plant (Camellia sinensis L.) tolerance at cold temperature

description: Table S1: Nucleotide sequences of primers specific to flavonoid biosynthesis, amino acid metabolism and AsA/glutathione cycle, TCA cycle, glyoxylate cycle and carbon fixation in photosynthetic organisms and oxidative pentose phosphate pathway and purine metabolism related genes used for qRT-PCR. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.20236113
title: Additional file 3 of Genome-wide analysis of citrus TCP transcription factors and their responses to abiotic stresses

description: Additional file 3: Table S2. Gene ontology (GO) of Citrus sinensis TCP genes.
DOI: 10.6084/m9.figshare.16567172
title: Genome-wide analysis and characterization of GRAS family in switchgrass

description: <i>Panicum virgatum</i>, a model plant of cellulosic ethanol conversion, not only has high large biomass and strong adaptability to soil, but also grows well in marginal soil and has the advantage of improving saline-alkali soil. GRAS transcription factor gene family play important roles in individual environment adaption, and these vital functions has been proved in several plants, however, the research of GRAS in the development of switchgrass (<i>Panicum virgatum</i>) were limited. A comprehensive study was investigated to explore the relationship between GRAS gene family and resistance. According to the phylogenetic analysis, a total of 144 GRAS genes were identified and renamed which were classified into eight subfamilies. Chromosome distribution, tandem and segmental repeats analysis indicated that gene duplication events contributed a lot to the expansion of GRAS genes in the switchgrass genome. Sixty-six GRAS genes in switchgrass were identified as having orthologous genes with rice through gene duplication analysis. Most of these GRAS genes contained zero or one intron, and closely related genes in evolution shared similar motif composition. Interaction networks were analyzed including DELLA and ten interaction proteins that were primarily involved in gibberellin acid mediated signaling. Notably, online analysis indicated that the promoter regions of the identified PvGRAS genes contained many cis-elements including light responsive elements, suggesting that PvGRAS might involve in light signal cross-talking. This work provides key insights into resistance and bioavailability in switchgrass and would be helpful to further study the function of GRAS and GRAS-mediated signal transduction pathways.
DOI: 10.6084/m9.figshare.8179829
title: MOESM1 of Using hyperspectral analysis as a potential high throughput phenotyping tool in GWAS for protein content of rice quality

description: Additional file 1: Table S1. Information of all rice accessions.
DOI: 10.6084/m9.figshare.8179880
title: MOESM7 of Using hyperspectral analysis as a potential high throughput phenotyping tool in GWAS for protein content of rice quality

description: Additional file 7: TableÂ S4. Measurements of biochemical traits.
DOI: 10.6084/m9.figshare.8179880.v1
title: MOESM7 of Using hyperspectral analysis as a potential high throughput phenotyping tool in GWAS for protein content of rice quality

description: Additional file 7: TableÂ S4. Measurements of biochemical traits.
DOI: 10.6084/m9.figshare.8179886.v1
title: MOESM8 of Using hyperspectral analysis as a potential high throughput phenotyping tool in GWAS for protein content of rice quality

description: Additional file 8: TableÂ S5. MAF of all identified SNPs.
DOI: 10.34740/kaggle/dsv/7636911
title: 2021 World Population (updated daily)
DOI: 10.6084/m9.figshare.16567172.v1
title: Genome-wide analysis and characterization of GRAS family in switchgrass

description: <i>Panicum virgatum</i>, a model plant of cellulosic ethanol conversion, not only has high large biomass and strong adaptability to soil, but also grows well in marginal soil and has the advantage of improving saline-alkali soil. GRAS transcription factor gene family play important roles in individual environment adaption, and these vital functions has been proved in several plants, however, the research of GRAS in the development of switchgrass (<i>Panicum virgatum</i>) were limited. A comprehensive study was investigated to explore the relationship between GRAS gene family and resistance. According to the phylogenetic analysis, a total of 144 GRAS genes were identified and renamed which were classified into eight subfamilies. Chromosome distribution, tandem and segmental repeats analysis indicated that gene duplication events contributed a lot to the expansion of GRAS genes in the switchgrass genome. Sixty-six GRAS genes in switchgrass were identified as having orthologous genes with rice through gene duplication analysis. Most of these GRAS genes contained zero or one intron, and closely related genes in evolution shared similar motif composition. Interaction networks were analyzed including DELLA and ten interaction proteins that were primarily involved in gibberellin acid mediated signaling. Notably, online analysis indicated that the promoter regions of the identified PvGRAS genes contained many cis-elements including light responsive elements, suggesting that PvGRAS might involve in light signal cross-talking. This work provides key insights into resistance and bioavailability in switchgrass and would be helpful to further study the function of GRAS and GRAS-mediated signal transduction pathways.
DOI: 10.6084/m9.figshare.7654283
title: Additional file 2: of Physiological and iTRAQ-based proteomic analyses reveal the function of exogenous γ-aminobutyric acid (GABA) in improving tea plant (Camellia sinensis L.) tolerance at cold temperature

description: Table S2: Functional classifications of identified proteins significantly expressed in leaves of tea plants exposed to the treatments T2/T1 for 7 days (25 °C and 25 °C + GABA for T1 and T2 respectively). Each value represents the average of three biological replicates. The average is significant at a p &lt; 0.01 level. A t-test value &lt; 0.05 is considered to be significant between treatment T2 and T1. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.7654301.v1
title: Additional file 5: of Physiological and iTRAQ-based proteomic analyses reveal the function of exogenous γ-aminobutyric acid (GABA) in improving tea plant (Camellia sinensis L.) tolerance at cold temperature

description: Table S5: Functional classifications of identified proteins significantly expressed in leaves of tea plants exposed to the treatments T3/T1 for 7 days (25 °C and 4 °C for T1 and T3, respectively). Each value represents the average of three biological replicates. The average is significant at a p &lt; 0.01 level. A t-test value &lt; 0.05 is considered to be significant between treatment T3 and T1. (XLSX 32 kb)
DOI: 10.6084/m9.figshare.7654289.v1
title: Additional file 3: of Physiological and iTRAQ-based proteomic analyses reveal the function of exogenous γ-aminobutyric acid (GABA) in improving tea plant (Camellia sinensis L.) tolerance at cold temperature

description: Table S3: Functional classifications of identified proteins significantly expressed in leaves of tea plants exposed to the treatments T4/T3 for 7 days (4 °C and 4 °C + GABA for T3 and T4, respectively). Each value represents the average of three biological replicates. The average is significant at a p &lt; 0.01 level. A t-test value &lt; 0.05 is considered to be significant between treatment T4 and T3. (XLSX 47 kb)
DOI: 10.6084/m9.figshare.7654283.v1
title: Additional file 2: of Physiological and iTRAQ-based proteomic analyses reveal the function of exogenous γ-aminobutyric acid (GABA) in improving tea plant (Camellia sinensis L.) tolerance at cold temperature

description: Table S2: Functional classifications of identified proteins significantly expressed in leaves of tea plants exposed to the treatments T2/T1 for 7 days (25 °C and 25 °C + GABA for T1 and T2 respectively). Each value represents the average of three biological replicates. The average is significant at a p &lt; 0.01 level. A t-test value &lt; 0.05 is considered to be significant between treatment T2 and T1. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.7654295
title: Additional file 4: of Physiological and iTRAQ-based proteomic analyses reveal the function of exogenous γ-aminobutyric acid (GABA) in improving tea plant (Camellia sinensis L.) tolerance at cold temperature

description: Table S4: Functional classifications of identified proteins significantly expressed in leaves of tea plants exposed to the treatments T4/T1 for 7 days (25 °C and 4 °C + GABA for T1 and T4, respectively). Each value represents the average of three biological replicates. The average is significant at a p &lt; 0.01 level. At-test value &lt; 0.05 is considered to be significant between treatment T4 and T1. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.7654310
title: Additional file 6: of Physiological and iTRAQ-based proteomic analyses reveal the function of exogenous γ-aminobutyric acid (GABA) in improving tea plant (Camellia sinensis L.) tolerance at cold temperature

description: Table S6: Functional classifications of identified proteins significantly expressed in leaves of tea plants exposed to the treatments T4/T2 for 7 days (25 °C + GABA and 4 °C + GABA for T2 and T4, respectively). Each value represents the average of three biological replicates. The average is significant at a p &lt; 0.01 level. At-test value &lt; 0.05 is considered to be significant between treatment T4 and T2. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.7654295.v1
title: Additional file 4: of Physiological and iTRAQ-based proteomic analyses reveal the function of exogenous γ-aminobutyric acid (GABA) in improving tea plant (Camellia sinensis L.) tolerance at cold temperature

description: Table S4: Functional classifications of identified proteins significantly expressed in leaves of tea plants exposed to the treatments T4/T1 for 7 days (25 °C and 4 °C + GABA for T1 and T4, respectively). Each value represents the average of three biological replicates. The average is significant at a p &lt; 0.01 level. At-test value &lt; 0.05 is considered to be significant between treatment T4 and T1. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.7654301
title: Additional file 5: of Physiological and iTRAQ-based proteomic analyses reveal the function of exogenous γ-aminobutyric acid (GABA) in improving tea plant (Camellia sinensis L.) tolerance at cold temperature

description: Table S5: Functional classifications of identified proteins significantly expressed in leaves of tea plants exposed to the treatments T3/T1 for 7 days (25 °C and 4 °C for T1 and T3, respectively). Each value represents the average of three biological replicates. The average is significant at a p &lt; 0.01 level. A t-test value &lt; 0.05 is considered to be significant between treatment T3 and T1. (XLSX 32 kb)
DOI: 10.6084/m9.figshare.7654310.v1
title: Additional file 6: of Physiological and iTRAQ-based proteomic analyses reveal the function of exogenous γ-aminobutyric acid (GABA) in improving tea plant (Camellia sinensis L.) tolerance at cold temperature

description: Table S6: Functional classifications of identified proteins significantly expressed in leaves of tea plants exposed to the treatments T4/T2 for 7 days (25 °C + GABA and 4 °C + GABA for T2 and T4, respectively). Each value represents the average of three biological replicates. The average is significant at a p &lt; 0.01 level. At-test value &lt; 0.05 is considered to be significant between treatment T4 and T2. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.7654319.v1
title: Additional file 8: of Physiological and iTRAQ-based proteomic analyses reveal the function of exogenous Îł-aminobutyric acid (GABA) in improving tea plant (Camellia sinensis L.) tolerance at cold temperature

description: Table S8, S9 & S10: Sequences of all unique peptides matched to each identified proteins. (ZIP 1383 kb)
DOI: 10.6084/m9.figshare.7654292.v1
title: Additional file 1: of MiRNA detection in cervical exfoliated cells for missed high-grade lesions in women with LSIL/CIN1 diagnosis after colposcopy-guided biopsy

description: Table S1. Primes sequence of the miRNA. (XLS 21 kb)
DOI: 10.6084/m9.figshare.20236122.v1
title: Additional file 6 of Genome-wide analysis of citrus TCP transcription factors and their responses to abiotic stresses

description: Additional file 6: Table S4. List of accession IDs or numbers of all sequences used in this study.
DOI: 10.6084/m9.figshare.20236122
title: Additional file 6 of Genome-wide analysis of citrus TCP transcription factors and their responses to abiotic stresses

description: Additional file 6: Table S4. List of accession IDs or numbers of all sequences used in this study.
DOI: 10.13145/bacdive124616.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.25989/1gn4-c411
title: Materials Experiment and Analysis Database: Sample imaging measurements containing 1899 files performed on plate containing Ni,Co,Ce,Ta annealed at 350.0C to add O on 2015-01-29 from Run 20150129.151401

description: Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/<br>20150129.151401.copied-20150809220239701PDT.zip <a class="btn btn-xs piwik_download" 
            type="application/octet-stream" href="https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/1gn4-c411/20150129.151401.copied-20150809220239701PDT.zip">
            <i class="fa fa-download"></i> Download</a>    <br>
description: This record is a component of the Materials Experiment and
Analysis Database (MEAD). It contains raw data and metadata from millions 
of materials synthesis and characterization experiments, as well as the 
analysis and distillation of that data into property and performance 
metrics. The unprecedented quantity and diversity of experimental data 
are searchable by experiment and analysis attributes generated by both 
researchers and data processing software.
DOI: 10.13145/bacdive124617.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.25989/1gsz-1122
title: Materials Experiment and Analysis Database: Sample imaging measurements collected from 2 run(s) performed on plate(s) containing Bi,Co,La,Fe annealed at 610.0C to add O on 2014-04-28 from Experiment 20140427.173449

description: Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/<br>20140427.173449.copied-20151126000322475PST.zip <a class="btn btn-xs piwik_download" 
            type="application/octet-stream" href="https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/1gsz-1122/20140427.173449.copied-20151126000322475PST.zip">
            <i class="fa fa-download"></i> Download</a>    <br>
description: This record is a component of the Materials Experiment and
Analysis Database (MEAD). It contains raw data and metadata from millions 
of materials synthesis and characterization experiments, as well as the 
analysis and distillation of that data into property and performance 
metrics. The unprecedented quantity and diversity of experimental data 
are searchable by experiment and analysis attributes generated by both 
researchers and data processing software.
DOI: 10.13145/bacdive124618.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive124619.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.25989/1gva-b732
title: Materials Experiment and Analysis Database: Material library with Fe,Fe,Fe,Fe deposited by INKJET on 2014-07-17 from Plate 00020518

description: Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/<br>2051.zip <a class="btn btn-xs piwik_download" 
            type="application/octet-stream" href="https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/1gva-b732/2051.zip">
            <i class="fa fa-download"></i> Download</a>    <br>
description: This record is a component of the Materials Experiment and
Analysis Database (MEAD). It contains raw data and metadata from millions 
of materials synthesis and characterization experiments, as well as the 
analysis and distillation of that data into property and performance 
metrics. The unprecedented quantity and diversity of experimental data 
are searchable by experiment and analysis attributes generated by both 
researchers and data processing software.
DOI: 10.13145/bacdive124620.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.25989/1gw2-kx63
title: Materials Experiment and Analysis Database: Electrochemistry measurements collected from 1 run(s) performed on plate(s) containing Ce,V,Ar,O annealed at 500.0C to add O on 2016-04-15 from Experiment 20160415.120308

description: Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/<br>20160415.120308.copied-20160415220715584PDT.zip <a class="btn btn-xs piwik_download" 
            type="application/octet-stream" href="https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/1gw2-kx63/20160415.120308.copied-20160415220715584PDT.zip">
            <i class="fa fa-download"></i> Download</a>    <br>
description: This record is a component of the Materials Experiment and
Analysis Database (MEAD). It contains raw data and metadata from millions 
of materials synthesis and characterization experiments, as well as the 
analysis and distillation of that data into property and performance 
metrics. The unprecedented quantity and diversity of experimental data 
are searchable by experiment and analysis attributes generated by both 
researchers and data processing software.
DOI: 10.13145/bacdive124621.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive124622.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.25989/1gy3-0k20
title: Materials Experiment and Analysis Database: Electrochemistry analysis in which 0 sub-analyses are performed on plate(s) containing CuV,Cu,Ca,Sr,Zn,Pb,Ce,Nb annealed at 565.0C to add O on 2016-10-07 from Analysis 20161007.120729

description: Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/<br>20161007.120729.copied-20161108211106759PST.zip <a class="btn btn-xs piwik_download" 
            type="application/octet-stream" href="https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/1gy3-0k20/20161007.120729.copied-20161108211106759PST.zip">
            <i class="fa fa-download"></i> Download</a>    <br>
description: This record is a component of the Materials Experiment and
Analysis Database (MEAD). It contains raw data and metadata from millions 
of materials synthesis and characterization experiments, as well as the 
analysis and distillation of that data into property and performance 
metrics. The unprecedented quantity and diversity of experimental data 
are searchable by experiment and analysis attributes generated by both 
researchers and data processing software.
DOI: 10.13145/bacdive124623.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.25989/1gyp-c309
title: Materials Experiment and Analysis Database: Electrochemistry measurements containing 1312 files performed on plate containing Bi,Mn,Sm,Co annealed at 610.0C to add O on 2014-04-29 from Run 20140429.145032

description: Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/<br>20140429.145032.copied-20150131000000000PST.zip <a class="btn btn-xs piwik_download" 
            type="application/octet-stream" href="https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/1gyp-c309/20140429.145032.copied-20150131000000000PST.zip">
            <i class="fa fa-download"></i> Download</a>    <br>
description: This record is a component of the Materials Experiment and
Analysis Database (MEAD). It contains raw data and metadata from millions 
of materials synthesis and characterization experiments, as well as the 
analysis and distillation of that data into property and performance 
metrics. The unprecedented quantity and diversity of experimental data 
are searchable by experiment and analysis attributes generated by both 
researchers and data processing software.
DOI: 10.13145/bacdive124624.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive124625.20201210.5
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.