cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6938573.v1
title: Activation of ferritinophagy is required for the RNA-binding protein ELAVL1/HuR to regulate ferroptosis in hepatic stellate cells

description: Ferroptosis is a recently recognized form of regulated cell death that is characterized by lipid peroxidation. However, the molecular mechanisms regulating ferroptosis are largely unknown. In this study, we report that the RNA-binding protein ELAVL1/HuR plays a crucial role in regulating ferroptosis in liver fibrosis. Upon exposure to ferroptosis-inducing compounds, ELAVL1 protein expression was remarkably increased through the inhibition of the ubiquitin-proteasome pathway. <i>ELAVL1</i> siRNA led to ferroptosis resistance, whereas <i>ELAVL1</i> plasmid contributed to classical ferroptotic events. Interestingly, upregulated ELAVL1 expression also appeared to increase autophagosome generation and macroautophagic/autophagic flux, which was the underlying mechanism for ELAVL1-enhanced ferroptosis. Autophagy depletion completely impaired ELAVL1-mediated ferroptotic events, whereas autophagy induction showed a synergistic effect with ELAVL1. Importantly, ELAVL1 promoted autophagy activation via binding to the AU-rich elements within the F3 of the 3ʹ-untranslated region of <i>BECN1/Beclin1</i> mRNA. The internal deletion of the F3 region abrogated the ELAVL1-mediated <i>BECN1</i> mRNA stability, and, in turn, prevented ELAVL1-enhanced ferroptosis. In mice, treatment with sorafenib alleviated murine liver fibrosis by inducing hepatic stellate cell (HSC) ferroptosis. HSC-specific knockdown of <i>ELAVL1</i> impaired sorafenib-induced HSC ferroptosis in murine liver fibrosis. Noteworthy, we retrospectively analyzed the effect of sorafenib on HSC ferroptosis in advanced fibrotic patients with hepatocellular carcinoma receiving sorafenib monotherapy. Attractively, ELAVL1 upregulation, ferritinophagy activation, and ferroptosis induction occurred in primary human HSCs from the collected human liver tissue. Overall, these results reveal novel molecular mechanisms and signaling pathways of ferroptosis, and also identify ELAVL1-autophagy-dependent ferroptosis as a potential target for the treatment of liver fibrosis.
DOI: 10.25549/usctheses-c89-142102
title: Duplicity Caprice II
DOI: 10.25549/usctheses-c89-142100
title: Caprice II
DOI: 10.25549/usctheses-c89-142105
title: Unsung IV
DOI: 10.6084/m9.figshare.14278989.v1
title: INSIGHT INTO THE EFFECTS OF BAY-SUBSTITUENTS ON STABLE PERYLENE DIIMIDE RADICAL ANION SALTS

description: In previous work, the facile method to prepare perylene diimide radical anion salt by alkali treatment was reported. However, the effects of structure on synthetic process of perylene diimide radical anion salt, and the difference of response to Cu 2+ are not thoroughly understood. In this work, two bay-substituted perylene diimide derivatives radical anion salts have been synthesized and characterized in order to study the influence of the bay-substituted groups on the formation condition of the corresponding radical anion salt, and the sensitivity to Cu 2+. The result indicates that the perylene diimide with electron-donating groups (-O-Ph) at bay position was much easier to get the air-stable radical anion salts and had higher sensitivity to Cu 2+ compared to the perylene diimide with electron-withdrawing groups (-Br) at bay position.
DOI: 10.6084/m9.figshare.20046015
title: Additional file 3 of Identification of different proteins binding to Na, K-ATPase α1 in LPS-induced ARDS cell model by proteomic analysis

description: Additional file 3.
DOI: 10.6084/m9.figshare.14278900.v1
title: VIBRATIONAL SPECTROSCOPIC INVESTIGATION AND MOLECULAR STRUCTURE OF A 5α-REDUCTASE INHIBITOR: FINASTERIDE

description: By way of Density Functional Theory (DFT)-based computational methods with commercially available software, the computational work of which about the molecular properties, the vibrational modes and vibrational frequencies of finasteride were accomplished for the first time. In order to gain a deeper and more thorough understanding of the molecular structure and infrared spectrum of finasteride, the equilibrium geometry harmonic vibrational frequencies and geometric parameters (bond lengths, bond angles and dihedral angles) were calculated by Generalized Gradient Approximations (GGAs) with five different density functional methods (PBE, RPBE, HCTH, PW91 and BLYP), using Material Studio 8.0 program. Theoretical vibrational frequencies and theoretical optimized geometric parameters were compared with the corresponding experimental data, which concluded that the GGA/PW91 method were shown to be in a good agreement with the results of experiment. In addition, the highest occupied molecular orbital (HOMO) energies, the lowest unoccupied molecular orbital (LUMO) energies and electron density isosurface calculations were done with an aim at a better understanding of the stability and reactivity of the molecule, indicating that the alkene and lactam conjugated system on the ring A is more likely to interact with other species. And, the atomic charge distribution was also calculated to understand the charge effect caused by electronegative atoms, which shows that the possible active-sites in chemical reactions are N1 and O1.
DOI: 10.6084/m9.figshare.14279111
title: FAST DETERMINATION OF THE SULFUR SPECIES IN SOLID PHASE SYSTEMS BY A TPO-IR METHOD

description: Qualitative and quantitative assessment of total sulfur and sulfur species in solid phase is necessarily important for development of effective desulfurization methods, reduction of environmental pollution, and prevention of catalyst poisoned. In this work, TPO-IR (Temperature Programmed Oxidation- Infrared) method was used for rapid determination of sulfur species in solid minerals. The high purity of Ag2S was used as the calibration materials at the fixed temperature of 1100 °C, and the TPO experimental runs were performed on the solid minerals of phosphorite and coal. The results show that pyrite sulfur with Tmax of 426 °C, and two thiophene sulfurs with Tmax of 450 °C and 481 °C were found in Kaiyang phosphorite by fitting the TPO-IR curves; while pyrite sulfur with Tmax of 432 °C, complex sulfide with Tmax of 679 °C and sulfate sulfur with Tmax of 939 °C were found in Weng’an phosphorite. For Gas coal, the TPO-IR curves of sulfur release can be deconvoluted into seven individual curves, while that of Anthracite deconvoluted into four individual curves. In conclusion, the TPO-IR method has many advantages for determination of sulfur species in solid phase systems, such as less sample consumption, simple pretreatment, convenient operation and low cost, etc.
DOI: 10.6084/m9.figshare.14279131.v1
title: PREPARATION AND PROPERTIES OF PT-RH-PD / CEO2-ZRO2-LA2O3-AL2O3 FIBROUS CATALYST VIA ELECTROSPINNING

description: In order to increase the specific surface area of Pt-Rh-Pd / Al2O3 automotive three-way catalyst and improve its low-temperature reduction performance, Ce, Zr, and La were added to the Pt-Rh-Pd / Al2O3 catalyst to prepare the fibrous Pt-Rh-Pd / CeO2-ZrO2-La2O3-Al2O3 catalyst via an electrospinning technique. The fibrous catalysts were characterized by XRD, FT-IR, SEM-EDS, H2-TPR and BET analysis. The catalytic effect of the catalyst on automobile exhaust was also studied. Results revealed that the surface of catalysts is mainly mesoporous. Ce, Zr and La can remarkably increase the specific surface area of the Pt-Rh-Pd / Al2O3 catalyst. The specific surface area of the catalyst prepared with Pt Rh Pd molar ratio of 0.75:0.01:1 is 301.5816 m2 g-1, and the average diameter of which is 790 nm. In addition, the reaction temperature of the catalyst is approximately 220 °C, which shows good low-temperature reduction performance. Moreover, the Pt-Rh-Pd / CeO2-ZrO2-La2O3-Al2O3 catalyst has a catalytic conversion efficiency for NOX of 90.0% in automobile exhaust, a catalytic conversion efficiency for CO of 88.8%, and a catalytic conversion efficiency for SO2 of 75%.
DOI: 10.6084/m9.figshare.14279111.v1
title: FAST DETERMINATION OF THE SULFUR SPECIES IN SOLID PHASE SYSTEMS BY A TPO-IR METHOD

description: Qualitative and quantitative assessment of total sulfur and sulfur species in solid phase is necessarily important for development of effective desulfurization methods, reduction of environmental pollution, and prevention of catalyst poisoned. In this work, TPO-IR (Temperature Programmed Oxidation- Infrared) method was used for rapid determination of sulfur species in solid minerals. The high purity of Ag2S was used as the calibration materials at the fixed temperature of 1100 °C, and the TPO experimental runs were performed on the solid minerals of phosphorite and coal. The results show that pyrite sulfur with Tmax of 426 °C, and two thiophene sulfurs with Tmax of 450 °C and 481 °C were found in Kaiyang phosphorite by fitting the TPO-IR curves; while pyrite sulfur with Tmax of 432 °C, complex sulfide with Tmax of 679 °C and sulfate sulfur with Tmax of 939 °C were found in Weng’an phosphorite. For Gas coal, the TPO-IR curves of sulfur release can be deconvoluted into seven individual curves, while that of Anthracite deconvoluted into four individual curves. In conclusion, the TPO-IR method has many advantages for determination of sulfur species in solid phase systems, such as less sample consumption, simple pretreatment, convenient operation and low cost, etc.
DOI: 10.6084/m9.figshare.6939317.v1
title: Additional file 22: of Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave

description: Representative protein sequences in Agave americana. (FASTA 9640 kb)
DOI: 10.6084/m9.figshare.14279131
title: PREPARATION AND PROPERTIES OF PT-RH-PD / CEO2-ZRO2-LA2O3-AL2O3 FIBROUS CATALYST VIA ELECTROSPINNING

description: In order to increase the specific surface area of Pt-Rh-Pd / Al2O3 automotive three-way catalyst and improve its low-temperature reduction performance, Ce, Zr, and La were added to the Pt-Rh-Pd / Al2O3 catalyst to prepare the fibrous Pt-Rh-Pd / CeO2-ZrO2-La2O3-Al2O3 catalyst via an electrospinning technique. The fibrous catalysts were characterized by XRD, FT-IR, SEM-EDS, H2-TPR and BET analysis. The catalytic effect of the catalyst on automobile exhaust was also studied. Results revealed that the surface of catalysts is mainly mesoporous. Ce, Zr and La can remarkably increase the specific surface area of the Pt-Rh-Pd / Al2O3 catalyst. The specific surface area of the catalyst prepared with Pt Rh Pd molar ratio of 0.75:0.01:1 is 301.5816 m2 g-1, and the average diameter of which is 790 nm. In addition, the reaction temperature of the catalyst is approximately 220 °C, which shows good low-temperature reduction performance. Moreover, the Pt-Rh-Pd / CeO2-ZrO2-La2O3-Al2O3 catalyst has a catalytic conversion efficiency for NOX of 90.0% in automobile exhaust, a catalytic conversion efficiency for CO of 88.8%, and a catalytic conversion efficiency for SO2 of 75%.
DOI: 10.25549/usctheses-c89-142103
title: Duplicity Caprice IV
DOI: 10.6084/m9.figshare.6939173
title: Additional file 1: of Identification of a G2-like transcription factor, OsPHL3, functions as a negative regulator of flowering in rice by co-expression and reverse genetic analysis

description: Table S1. The Pearson correlation coefficient value between flowering time regulators (OsGI, Ghd7, OsMADS14 and Hd3a) and top-five transcription factor families. (XLSX 19 kb)
DOI: 10.5526/erdr-00000180
title: Dairy herd bunching metrics and ambient temperatures
DOI: 10.6084/m9.figshare.6939173.v1
title: Additional file 1: of Identification of a G2-like transcription factor, OsPHL3, functions as a negative regulator of flowering in rice by co-expression and reverse genetic analysis

description: Table S1. The Pearson correlation coefficient value between flowering time regulators (OsGI, Ghd7, OsMADS14 and Hd3a) and top-five transcription factor families. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.6939368
title: Additional file 25: of Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave

description: Expression data of Agave americana transcripts detected in at least 4 of the 15 samples, with an average expression level of 5 RPKM or higher. (XLSX 14100 kb)
DOI: 10.25549/usctheses-c89-142101
title: Duplicity Antithesis
DOI: 10.6084/m9.figshare.16900977.v1
title: Additional file 2 of Genome-wide identification, classification, and expression analysis of the JmjC domain-containing histone demethylase gene family in birch

description: Additional file 2: Table S2. Homolog similarity of JHDM genes between birch and Arabidopsis.
DOI: 10.6084/m9.figshare.21229136.v3
title: Supplementary Tables

description: Table S3: Overview of shark skin samples used for AI deep learning to create 10 morphogroups
Table S4: Overview of shark species and bodylocation used for nanoindentation
Table S5: Hardness (H) data from nanoindentation
Table S6: Reduced elastic modulus (Er) data from nanoindentation
Table S7: H/Er data
Table S8: Fluorine content (wt%) from electron probe micro-analysis
Table S9: Drag coefficient values 
Table S10: Performance rank for functional profiles
Table S11A-I: Load-displacement data
Table S12: Scalebar values for flow simulation videos
DOI: 10.6084/m9.figshare.14278841.v1
title: THEORETICAL CALCULATIONS ABOUT THE THERMAL STABILITY AND DETONATION CHARACTER OF NITRAMINO-SUBSTITUTED PYRROLE

description: A series of nitramino-derivatives of pyrrole were designed through introducing the nitramino group into pyrrole ring to look for high-energy-density compounds. The molecular stabilities are explored thoroughly based on the calculated heats of formation, bond dissociation energy, and bond order at the B3PW91/6-311+G(d,p) level. The results indicated that the molecules designed in this paper have enough stability not only thermally but also kinetically. To evaluate the potential application as high-energy-density compounds, the detonation velocity and detonation pressure are calculated by using the Kamlet-Jacobs equation. Based on the calculation both of stability and detonation characters, four nitramino-derivatives of pyrrole (D1: 2,3-trinitramino-1H-pyrrole, D2: 2,3,4-trinitramino-1H-pyrrole, D3: 2,3,5-trinitramino-1H- pyrrole and E: 2,3,4,5- tetranitramino- 1H-pyrrole) are screened out as potential high-energy-density molecules for further study.
DOI: 10.6084/m9.figshare.20046012
title: Additional file 2 of Identification of different proteins binding to Na, K-ATPase α1 in LPS-induced ARDS cell model by proteomic analysis

description: Additional file 2.
DOI: 10.6084/m9.figshare.20046018.v1
title: Additional file 4 of Identification of different proteins binding to Na, K-ATPase α1 in LPS-induced ARDS cell model by proteomic analysis

description: Additional file 4.
DOI: 10.6084/m9.figshare.6939353.v1
title: Additional file 24: of Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave

description: Representative protein sequences in Agave tequilana. (FASTA 11400 kb)
DOI: 10.6084/m9.figshare.6938957.v1
title: Additional file 2: of Homoeolog expression bias and expression level dominance in resynthesized allopolyploid Brassica napus

description: GO enrichment analysis of ELD genes in the resynthesized B. napus. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.6939368.v1
title: Additional file 25: of Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave

description: Expression data of Agave americana transcripts detected in at least 4 of the 15 samples, with an average expression level of 5 RPKM or higher. (XLSX 14100 kb)
DOI: 10.6084/m9.figshare.6938975
title: Additional file 3: of Homoeolog expression bias and expression level dominance in resynthesized allopolyploid Brassica napus

description: Primer sequences used for qRT-PCR analyses. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.16900983
title: Additional file 4 of Genome-wide identification, classification, and expression analysis of the JmjC domain-containing histone demethylase gene family in birch

description: Additional file 4: Table S4. The distribution of functional domains in different JmjC subfamilies of birch.
DOI: 10.15468/dl.6x8adu
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oxalis schaeferi R.Knuth"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067200-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.br7gpq
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pavetta ankolensis Bridson"
 ]
}

 The dataset includes 14 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067201-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k2tgpu
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paphiopedilum rungsuriyanum O.Gruss, Rungruang, Chaisur. & Dionisio"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067202-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k59c9r
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Palisota bogneri Brenan"
 ]
}

 The dataset includes 88 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067203-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xuhubd
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pavetta antennifera Wernham"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067205-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pstgw8
title: Occurrence Download

description: A dataset containing 443 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oxalis semiloba Sond."
 ]
}

 The dataset includes 443 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067204-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/7987019
title: Indian Premier League (IPL) - 2008-2024
DOI: 10.15468/dl.epbyw2
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paphiopedilum sanderianum (Rchb.f.) Stein"
 ]
}

 The dataset includes 36 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067207-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9gc3gh
title: Occurrence Download

description: A dataset containing 232 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Palisota brachythyrsa Mildbr."
 ]
}

 The dataset includes 232 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067208-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wfszs8
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pavetta arenicola K.Schum."
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067209-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ac5kjc
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oxalis senecta T.M.Salter"
 ]
}

 The dataset includes 15 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067210-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xbqq7h
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paphiopedilum sangii Braem"
 ]
}

 The dataset includes 17 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067211-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rk8g3x
title: Occurrence Download

description: A dataset containing 423 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Palisota bracteosa C.B.Clarke"
 ]
}

 The dataset includes 423 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067212-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.khsdp6
title: Occurrence Download

description: A dataset listing the 96 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Invasive Alien plant species of Malawi"
 ]
}

 The dataset's 96 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067177-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.krwsan
title: Occurrence Download

description: A dataset containing 115 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pavetta arenosa Lour."
 ]
}

 The dataset includes 115 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067213-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b37j8q
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oxalis setosa E.Mey. ex Sond."
 ]
}

 The dataset includes 23 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067214-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e3wfs7
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paphiopedilum schoseri Braem & H.Mohr"
 ]
}

 The dataset includes 21 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067215-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.