cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6448089
title: 2022_Shayya_UPR_Guidance

description: This repository contains raw, intermediate and final supplementary data associated with the following study: <strong>ER stress transforms stochastic olfactory receptor gene choice into stereotypic axon guidance programs</strong> Hani J. Shayya<sup>1,2,3</sup>, Jerome K. Kahiapo<sup>1,3</sup>, Rachel Duffié<sup>1</sup>, Katherine S. Lehmann<sup>4</sup>, Lisa Bashkirova<sup>1</sup>, Kevin Monahan<sup>1</sup>, Ryan P. Dalton<sup>5</sup>, Joanna Gao<sup>6</sup>, Song Jiao<sup>4</sup>, Ira Schieren<sup>1</sup>, Leonardo Belluscio<sup>4</sup>, and Stavros Lomvardas<sup>1,7,8</sup> <sup>1</sup>Mortimer B. Zuckerman Mind, Brain and Behavior Institute, Columbia University, New York, NY 10027, USA<br> <sup>2</sup>Medical Scientist Training Program, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY, 10032, USA<br> <sup>3</sup>Integrated Program in Cellular, Molecular, and Biomedical Studies, Columbia University Irving Medical Center, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY, 10032, USA<br> <sup>4</sup>Developmental Plasticity Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, 20892 USA<br> <sup>5</sup>The Miller Institute for Basic Research in Science, University of California Berkeley, Berkeley, CA 94720 USA<br> <sup>6</sup>Barnard College, New York, NY, 10025 USA<br> <sup>7</sup>Department of Biochemistry and Molecular Biophysics, Columbia University Irving Medical Center, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY, 10032, USA<br> <sup>8</sup>Department of Neuroscience, Columbia University Irving Medical Center, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY, 10032, USA See https://github.com/hshayya/2022_Shayya_UPR_Guidance for code and additional information on organization of the dataset. Unzip the file here to recover the folder structure referenced in the Github README.
description: Funding: R01DC015451 (SL), HHMI Faculty Scholar Award 55108540 (SL) and F30DC019263 (HS).
DOI: 10.5281/zenodo.6448088
title: 2022_Shayya_UPR_Guidance

description: This repository contains raw, intermediate and final supplementary data associated with the following study: <strong>ER stress transforms stochastic olfactory receptor gene choice into stereotypic axon guidance programs</strong> Hani J. Shayya<sup>1,2,3</sup>, Jerome K. Kahiapo<sup>1,3</sup>, Rachel Duffié<sup>1</sup>, Katherine S. Lehmann<sup>4</sup>, Lisa Bashkirova<sup>1</sup>, Kevin Monahan<sup>1</sup>, Ryan P. Dalton<sup>5</sup>, Joanna Gao<sup>6</sup>, Song Jiao<sup>4</sup>, Ira Schieren<sup>1</sup>, Leonardo Belluscio<sup>4</sup>, and Stavros Lomvardas<sup>1,7,8</sup> <sup>1</sup>Mortimer B. Zuckerman Mind, Brain and Behavior Institute, Columbia University, New York, NY 10027, USA<br> <sup>2</sup>Medical Scientist Training Program, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY, 10032, USA<br> <sup>3</sup>Integrated Program in Cellular, Molecular, and Biomedical Studies, Columbia University Irving Medical Center, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY, 10032, USA<br> <sup>4</sup>Developmental Plasticity Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, 20892 USA<br> <sup>5</sup>The Miller Institute for Basic Research in Science, University of California Berkeley, Berkeley, CA 94720 USA<br> <sup>6</sup>Barnard College, New York, NY, 10025 USA<br> <sup>7</sup>Department of Biochemistry and Molecular Biophysics, Columbia University Irving Medical Center, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY, 10032, USA<br> <sup>8</sup>Department of Neuroscience, Columbia University Irving Medical Center, Vagelos College of Physicians and Surgeons, Columbia University, New York, NY, 10032, USA See https://github.com/hshayya/2022_Shayya_UPR_Guidance for code and additional information on organization of the dataset. Unzip the file here to recover the folder structure referenced in the Github README.
description: Funding: R01DC015451 (SL), HHMI Faculty Scholar Award 55108540 (SL) and F30DC019263 (HS).
DOI: 10.6084/m9.figshare.19579096
title: Prevalence of depression in Uganda. A systematic review and meta-analysis

description: This is cleaned data for the systematic review of the p<strong>revalence of depression in Uganda</strong><strong>.</strong>
DOI: 10.6084/m9.figshare.19579096.v1
title: Prevalence of depression in Uganda. A systematic review and meta-analysis

description: This is cleaned data for the systematic review of the p<strong>revalence of depression in Uganda</strong><strong>.</strong>
DOI: 10.6084/m9.figshare.19579099.v1
title: Table 1. Beta-lactamase resistance genes of Enterobacterales isolated from ready-to-eat food

description: <strong>Table 1 summarizes the occurrence of </strong><strong>Beta-lactamase resistance genes of </strong><em><strong>Enterobacterales </strong></em><strong>isolated from ready-to-eat food and the characteristics of the samples. </strong>
DOI: 10.6084/m9.figshare.19579099
title: Table 1. Beta-lactamase resistance genes of Enterobacterales isolated from ready-to-eat food

description: <strong>Table 1 summarizes the occurrence of </strong><strong>Beta-lactamase resistance genes of </strong><em><strong>Enterobacterales </strong></em><strong>isolated from ready-to-eat food and the characteristics of the samples. </strong>
DOI: 10.5281/zenodo.6450144
title: R Skills Building for Cancer Scientists

description: These datasets are being used in our course but are originally from the course run by the Bioinformatics Core<br> at the Cancer Research UK Cambridge Institute (Contributions : Matthew Eldridge, Chandra Chilamakuri, Mark Fernandes, Ashley Sawle, Kamal Kishore, Sergio Martinez Cuesta, Rory Stark).
DOI: 10.5281/zenodo.6426302
title: R Skills Building for Cancer Scientists

description: These datasets are being used in our course but are originally from the course run by the Bioinformatics Core<br> at the Cancer Research UK Cambridge Institute (Contributions : Matthew Eldridge, Chandra Chilamakuri, Mark Fernandes, Ashley Sawle, Kamal Kishore, Sergio Martinez Cuesta, Rory Stark).
DOI: 10.6084/m9.figshare.19280108
title: Supplementary_Table_2.docx

description: Results from gene set enrichment analyses.
DOI: 10.6084/m9.figshare.19280108.v1
title: Supplementary_Table_2.docx

description: Results from gene set enrichment analyses.
DOI: 10.5517/ccdc.csd.cc2bgvg4
title: CCDC 2159226: Experimental Crystal Structure Determination

description: Related Article: Frank Meyer-Wegner, Michael Bolte, Michael Bolte|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2bgvh5
title: CCDC 2159227: Experimental Crystal Structure Determination

description: Related Article: Frank Meyer-Wegner, Michael Bolte, Michael Bolte|2022|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc2bgywn
title: CCDC 2159332: Experimental Crystal Structure Determination

description: Related Article: Michael Huth, Michael Bolte|2022|CSD Communication|||
DOI: 10.5066/p9a1icyj
title: Combined Occurrence Frequency of Wind Speeds and Precipitation Amounts Conducive to Dust Dispersion from Disturbed Mine and Mill Sites in the United States, 2007?16

description: Dispersion of dust depends on many complex factors related to the nature of the disturbed materials, climate, dust control measures, and localized weather patterns. This dataset presents wind speed and rainfall as climate factors that influence dust dispersion. These two basic factors were identified as a subset of the many factors that can lead to dust dispersion. Arpacioglu and Er (2003) reviewed historical data from selected mine sites and suggested that days when the windspeed was at least 5.4 meters per second (m/s) at 10 meters above land surface and rainfall was less than 0.25 centimeter (cm) might lead to greater dust dispersion. Existing publicly available precipitation and wind speed data from NASA's North American Land Data Assimilation System Phase 2 (NLDAS-2), reflecting climatic conditions over a 10-year period in the United States, were used to assess the number of days between 2007 and 2016 that meet these criteria. The resulting dust dispersion index data sets are intended to indicate areas that exhibit criteria that are most likely to disperse dust particulates and fugitive dusts from disturbed mine and mill sites. Reference: Arpacioglu, C. B., and Er, C., 2003, Estimation of Fugitive Dust Impacts of Open Pit Mines on Local Air Quality-A case study, Bellavista Gold Mine, Costa Rica: 18th International Mining Congress and Exhibition of Turkey-IMCET 2003, Turkey, IMCET.
DOI: 10.6084/m9.figshare.19579108
title: Characteristics (Sample type, date,treatment type,location, coordinates) of the ready-to-eat food samples.

description: Characteristics (Sample type, date,treatment type,location, coordinates) of the ready-to-eat food samples.
DOI: 10.6084/m9.figshare.19579108.v1
title: Characteristics (Sample type, date,treatment type,location, coordinates) of the ready-to-eat food samples.

description: Characteristics (Sample type, date,treatment type,location, coordinates) of the ready-to-eat food samples.
DOI: 10.6084/m9.figshare.19579177.v1
title: Biochemical tests performed on Enterobacterales isolates from Ready-to-eat Street Food in Ambato, Ecuador.

description: Biochemical tests performed on Enterobacterales isolates from Ready-to-eat Street Food in Ambato, Ecuador.
DOI: 10.6084/m9.figshare.19579177
title: Biochemical tests performed on Enterobacterales isolates from Ready-to-eat Street Food in Ambato, Ecuador.

description: Biochemical tests performed on Enterobacterales isolates from Ready-to-eat Street Food in Ambato, Ecuador.
DOI: 10.18739/a2w37kx1j
title: Radiocarbon dates from ice-edge ice-entombed tundra plants around the Orion and Serpens ice complexes, northern Baffin Island, Canada in 2018 and 2019

description: Radiocarbon dates on formerly ice-entombed tundra plants collected within 1 meter (m) of the current ice margin of rapidly receding ice caps on northern Baffin Island to test the concept of volcanic forcing on episodic ice cap expansion during the Common Era. The goal of this project is to examine the rate of onset of persistent Little Ice Age (LIA) cold by dating 50 new samples from current ice margins from ice complexes in Baffin Island, Canada, and comparing them to similar collections from 2005. If LIA ice expansion was abrupt and persistent then dates on the new plants should be about the same age as the 2005 samples, 200 to 500 m distant. Whereas if summers slowly cooled over decades-to-centuries through the late Holocene, then the new dates will be significantly older than their 2005 counterparts. Collectively, these data will provide the most robust testing of an abrupt onset of LIA cold and will be of interest to the sea ice and climate modeling communities.
DOI: 10.6084/m9.figshare.19579189
title: Antibiogram of Enterobacterales isolated from ready-to-eat Street food of Ambato, Ecuador

description: Antibiogram results of Enterobacterales isolated from ready-to-eat Street food of Ambato, Ecuador
DOI: 10.6084/m9.figshare.19579189.v1
title: Antibiogram of Enterobacterales isolated from ready-to-eat Street food of Ambato, Ecuador

description: Antibiogram results of Enterobacterales isolated from ready-to-eat Street food of Ambato, Ecuador
DOI: 10.6084/m9.figshare.19579198
title: Primers used in this study and PCR conditions.

description: <strong>Primers used in this study and PCR conditions.</strong>
DOI: 10.6084/m9.figshare.19579198.v1
title: Primers used in this study and PCR conditions.

description: <strong>Primers used in this study and PCR conditions.</strong>
DOI: 10.5281/zenodo.6450167
title: Información sobre viviendas en venta situadas en Sevilla por la web Idealista.com.

description: <strong>Este dataset consta de 30 viviendas de Sevilla (código postal 41003) que se sitúan en venta desde el portal web de Idealista. En él, se puede apreciar toda la información básica que ofrecen los anuncios: ubicación, precio, bajada de precio, elementos básicos de la vivienda y el consumo energético.</strong>
DOI: 10.3886/e167321
title: Replication code for: Voting and Political Participation in the Aftermath of the HIV/AIDS Epidemic

description: This code replicates the analysis in "Voting and Political Participation in the Aftermath of the HIV/AIDS Epidemic" by Hani Mansour and James Reeves.<br>For publication in the Journal of Human Resources.
DOI: 10.5281/zenodo.6450166
title: Información sobre viviendas en venta situadas en Sevilla por la web Idealista.com.

description: <strong>Este dataset consta de 30 viviendas de Sevilla (código postal 41003) que se sitúan en venta desde el portal web de Idealista. En él, se puede apreciar toda la información básica que ofrecen los anuncios: ubicación, precio, bajada de precio, elementos básicos de la vivienda y el consumo energético.</strong>
DOI: 10.3886/e167321v1
title: Replication code for: Voting and Political Participation in the Aftermath of the HIV/AIDS Epidemic

description: This code replicates the analysis in "Voting and Political Participation in the Aftermath of the HIV/AIDS Epidemic" by Hani Mansour and James Reeves.<br>For publication in the Journal of Human Resources.
DOI: 10.18739/a2445hc8p
title: Local community verification of shoreline change risks along the Alaskan Arctic Ocean coast (North Slope).

description: In April 2016, local perspectives of shoreline change risks in the Arctic Slope covering the National Petroleum Reserve - Alaska (NPR-A) and the Arctic National Wildlife Refuge (ANWR) were collected using a collaborative mapping process. About 300 shoreline change "problem places" contributed by 50 participants in Wainwright (8), Utqiagvik (32), and Kaktovik (10) were mapped, described, and digitized. The resulting geodatabase consists of problem feature locations linked to transcribed verbal or hand-written description and basic participant background information. Transcripts from audio recorded interactive mappings stored in MS Excel files also include statements that are not associated with a specific location. The purpose of the data set is to verify local shoreline change risks as a front-end evaluation effort to develop a shoreline change risk WebGIS for Alaska's Arctic Slope using a collaborative mapping and Instructional Systems Design (ISD) process.
DOI: 10.6084/m9.figshare.19579207
title: Antibiotic resistance genes and virulence genes harbored by Enterobacterales isolates from ready-to-eat street food in Ecuador.

description: Antibiotic resistance genes and virulence genes harbored by Enterobacterales isolates from ready-to-eat street food in Ecuador.
DOI: 10.6084/m9.figshare.19579171.v1
title: Mouse GRCm38.96 bed file

description: Made as described here: https://hackmd.io/@astrobiomike/generating-bs-seq-output-test-data
DOI: 10.6084/m9.figshare.19579171
title: Mouse GRCm38.96 bed file

description: Made as described here: https://hackmd.io/@astrobiomike/generating-bs-seq-output-test-data
DOI: 10.5281/zenodo.6427317
title: A one-year-long evaluation of a wind-farm parameterisation in HARMONIE-AROME -- Model data

description: This file contains supporting data for the manuscript "A one-year-long evaluation of a wind-farm parameterisation in HARMONIE-AROME" by van Stratum et al. 2022 in JAMES. - model_output: contains NetCDF files with HARMONIE-AROME for specific columns for the lidar locations, only for the WIPAFF flight comparison the full 3D hourly fields are given for one day. Files containing "DOWA_40h12tg2_fERA5_ptE" are the reference simulations and files containing "DOWA_40h12tg2_fERA5_WF2019_fix" are output from the wind farm parameterisation simulations. <br> - input_HARMONIE_WFP: contains the input files used for the wind farm parameterisation, where wind_turbine_coordinates.tab contains the locations of all wind turbines and the turbine type, and wind_turbine_0XX.tab the cp/ct curves, radius and hub height for each turbine type. The measurements used in the manuscript are from various external sources and should be downloaded separately.
DOI: 10.5281/zenodo.6427316
title: A one-year-long evaluation of a wind-farm parameterisation in HARMONIE-AROME -- Model data

description: This file contains supporting data for the manuscript "A one-year-long evaluation of a wind-farm parameterisation in HARMONIE-AROME" by van Stratum et al. 2022 in JAMES. - model_output: contains NetCDF files with HARMONIE-AROME for specific columns for the lidar locations, only for the WIPAFF flight comparison the full 3D hourly fields are given for one day. Files containing "DOWA_40h12tg2_fERA5_ptE" are the reference simulations and files containing "DOWA_40h12tg2_fERA5_WF2019_fix" are output from the wind farm parameterisation simulations. <br> - input_HARMONIE_WFP: contains the input files used for the wind farm parameterisation, where wind_turbine_coordinates.tab contains the locations of all wind turbines and the turbine type, and wind_turbine_0XX.tab the cp/ct curves, radius and hub height for each turbine type. The measurements used in the manuscript are from various external sources and should be downloaded separately.
DOI: 10.5281/zenodo.6450186
title: Dataset for Predatory publishing practices in the shadow of open access models [diploma thesis]

description: Dataset contains: a list of predatory journals with ISSNs/eISSNs based upon existing blacklists exports of OA publications from the systems OBD (Charles University personal bibliography database) and RIV (Register of information about research results of the Czech Republic) an analysis based on the data above answers gathered using a quantitative questionnaire on the title topic
DOI: 10.5281/zenodo.6450185
title: Dataset for Predatory publishing practices in the shadow of open access models [diploma thesis]

description: Dataset contains: a list of predatory journals with ISSNs/eISSNs based upon existing blacklists exports of OA publications from the systems OBD (Charles University personal bibliography database) and RIV (Register of information about research results of the Czech Republic) an analysis based on the data above answers gathered using a quantitative questionnaire on the title topic
DOI: 10.18739/a2wd3q30j
title: Collaborative Research: Diamonds and Oil from the Tundra: A System Study on the Impact of Changing Seasons on Mining and Oil Exploration NSF Award 0902130

description: This project seeks to understand how changing season length, principally winter, affects transportation systems that rely on ice roads in the Northwest Territories, Canada. From this small system, we then seek to generalize the results to an assessment of the impact of seasons on transportation and economic decisions in the North. Most of the project work consisted of riding on the ice roads, discussing their construction and operation with officials, and mining public data archives for climate and socio-economic data. On-site research consisted of visiting Yellowknife twice, along with the outlying communities of Dettah and Wha-Ti. We met with both representatives of the Joint Venture Ice Road (business -- serves the three mines) and the Government of Northwest Territories Ice Roads (government -- serves three native communities) (Fig. 1). We drove on both ice roads twice, once in January 2010 to see their construction, and once in March 2010 to see the finished product just before the road closed. We also conducted a survey about the reasons people use the government ice road between Dettah and Yellowknife and administered the survey by creating a roadblock in conjunction with the Department of Transportation of Government of Northwest Territories. Some images from the field work appear in Figure 2. We did a preliminary estimate of the economic impact of creating the Joint Venture road, as well as an economic impact of the Dettah ice road and its reduction in carbon dioxide (CO2) emissions. As part of the research we created a weather/snow/ice model based on historical data, allowed for snow plowing in this model, estimated load bearing properties, and estimated failure rates and economic costs based on reasonable estimates and historical data.
DOI: 10.18739/a2rr1pn8m
title: Creating a multi-scalar measurement of adaptation to climate change in high latitude regions, Arctic Norway, Finland, Sweden, and northwestern Russia, 2015 - 2016

description: This project has furthered an understanding of what the rest of the world may soon be facing as a result of climate change. This was done by assessing adaptation in the context of development planning in high latitude rural communities by comparing data on recent economic change among a sample of municipalities to identify elements of local development strategies that are associated with positive economic change in the local economy. Perceptions of climate change were then compared to historical, observed, and predicted changes. Specifically, municipalities included were parts of Norway, Sweden, Finland, and northwestern Russia lying above the Arctic Circle. Results indicate climate change is a significant factor in the municipalities surveyed but that impacts on local economies and societies vary drastically within the Arctic region. Coast-to-interior and north-to-south perspectives have highlighted these differences. By developing a climate change adaptation model, we highlight how various strategies have enhanced adaptive capacity by incorporating lived experiences and local knowledge into climate model projections.