cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/129666
title: Gyrocompass data collected during research cruise FK180624 using a Raytheon STD 22 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7580735
title: Additional file 1: of Inequalities in infant mortality in Italy

description: Infant mortality additional file. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.7580735.v1
title: Additional file 1: of Inequalities in infant mortality in Italy

description: Infant mortality additional file. (XLSX 20 kb)
DOI: 10.7284/129673
title: SSV (Sound Speed Velocimeter) data collected during research cruise FK180624 using a Valeport MiniSVS instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129432
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise FK180722 using a Hawaii UHDAS instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129431
title: Expendable Probe data collected during research cruise FK180722 using a Turo Quoll instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129434
title: Fluorometer data collected during research cruise FK180722 using a WET Labs ECO-FLNTU instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129430
title: GNSS (Global Navigation Satellite System) data collected during research cruise FK180722 using a C&C C-Nav 3050 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129429
title: Gyrocompass data collected during research cruise FK180722 using a Raytheon STD 22 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129437
title: SSV (Sound Speed Velocimeter) data collected during research cruise FK180722 using a Valeport MiniSVS instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129690
title: Fluorometer data collected during research cruise FK180731 using a WET Labs ECO-FLNTU instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129686
title: Gyrocompass data collected during research cruise FK180731 using a Raytheon STD 22 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129692
title: SSV (Sound Speed Velocimeter) data collected during research cruise FK180731 using a Valeport MiniSVS instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129763
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise FK180824 using a Hawaii UHDAS instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129771
title: Fluorometer data collected during research cruise FK180824 using a WET Labs ECO-FLNTU instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7580609
title: Additional file 6: of Comparative plastid genomics of Synurophyceae: inverted repeat dynamics and gene content variation

description: Table S1. The concatenated dataset of protein sequences used to infer the reference phylogenetic tree. (XLSX 53 kb)
DOI: 10.6084/m9.figshare.7580609.v1
title: Additional file 6: of Comparative plastid genomics of Synurophyceae: inverted repeat dynamics and gene content variation

description: Table S1. The concatenated dataset of protein sequences used to infer the reference phylogenetic tree. (XLSX 53 kb)
DOI: 10.7284/129770
title: GNSS (Global Navigation Satellite System) data collected during research cruise FK180824 using a C&C C-Nav 3050 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7580588
title: Additional file 2: of Biofilm production by Haemophilus influenzae and Streptococcus pneumoniae isolated from the nasopharynx of children with acute otitis media

description: Supplementary Data S2: Different cut-offs used to determine the biofilm production by H. influenzae: the different cut-offs used were as followed where AB represented the stained wells containing attached bacteria, CW the stained control wells containing bacteria-free medium only and G the bacterial growth control i) AB – CW: strong production &gt; 0.30, moderate production 0.10–0.30, negative 6, moderate production 2–6, negative 1.10, moderate production 0.35–1.10, negative
DOI: 10.7284/129769
title: Gyrocompass data collected during research cruise FK180824 using a Raytheon STD 22 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7580582
title: Additional file 1: of Biofilm production by Haemophilus influenzae and Streptococcus pneumoniae isolated from the nasopharynx of children with acute otitis media

description: Supplementary Data S1: Different cut-offs used to determine the biofilm production by S. pneumoniae: the different cut-offs used were as followed where AB represented the stained wells containing attached bacteria, CW the stained control wells containing bacteria-free medium only and G the bacterial growth control i) AB – CW: strong production &gt; 0.30, moderate production 0.10–0.30, negative 6, moderate production 2–6, negative 1.10, moderate production 0.35–1.10, negative
DOI: 10.7284/129765
title: Multibeam Echosounder data collected during research cruise FK180824 using a Kongsberg EM302 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7580564
title: Additional file 4: of Genomic characterisation of the new Dickeya fangzhongdai species regrouping plant pathogens and environmental isolates

description: Table S4. Genes present in the JS5 strain that are absent in all other Dickeya fangzhongdai strains. (XLSX 17 kb)
DOI: 10.7284/129766
title: Multibeam Echosounder data collected during research cruise FK180824 using a Kongsberg EM302 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7580564.v1
title: Additional file 4: of Genomic characterisation of the new Dickeya fangzhongdai species regrouping plant pathogens and environmental isolates

description: Table S4. Genes present in the JS5 strain that are absent in all other Dickeya fangzhongdai strains. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.7580552
title: Additional file 1 of Likelihood-based random-effects meta-analysis with few studies: empirical and simulation studies

description: LikelihoodMA-PoissonPL.R: The R code implementing profile likelihood (PL) estimation for the Poisson model according to Böhning et al. [7, Ch. 2] (see also the “Methods” section). (R 4 kb)
DOI: 10.6084/m9.figshare.7580555
title: Additional file 3: of Genomic characterisation of the new Dickeya fangzhongdai species regrouping plant pathogens and environmental isolates

description: Tables S2 and S3. Genes found in each of the JS5 and Nd14b genomic clades that are absent from the other Dickeya fangzhongdai genomes. (ZIP 37 kb)
DOI: 10.6084/m9.figshare.7580555.v1
title: Additional file 3: of Genomic characterisation of the new Dickeya fangzhongdai species regrouping plant pathogens and environmental isolates

description: Tables S2 and S3. Genes found in each of the JS5 and Nd14b genomic clades that are absent from the other Dickeya fangzhongdai genomes. (ZIP 37 kb)
DOI: 10.7284/129767
title: Multibeam Echosounder data collected during research cruise FK180824 using a Kongsberg EM710 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7580552.v1
title: Additional file 1 of Likelihood-based random-effects meta-analysis with few studies: empirical and simulation studies

description: LikelihoodMA-PoissonPL.R: The R code implementing profile likelihood (PL) estimation for the Poisson model according to Böhning et al. [7, Ch. 2] (see also the “Methods” section). (R 4 kb)
DOI: 10.7284/129768
title: Multibeam Echosounder data collected during research cruise FK180824 using a Kongsberg EM710 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129764
title: Splitbeam Echosounder data collected during research cruise FK180824 using a Kongsberg EK60 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7580186
title: Vaccinomics approach for developing multi-epitope peptide pneumococcal vaccine

description: <i>Streptococcus pneumoniae</i> is a leading cause of some diseases such as pneumonia, sepsis, and meningitis mostly in children less than 5 years of age. Presently, two types of pneumococcal vaccine are available on the market: polysaccharide vaccines (PPV) that are based on capsular polysaccharides of at least 92 different serotypes, and protein-conjugated polysaccharide vaccine (PCV). The PPVs such as PPV23 do not stimulate efficient protective immunity in children under 2 years old, while the PCVs such as PCV7, PCV10, and PCV13 that cover 7, 10, and 13 serotypes, respectively, highly protect newborns, but have some disadvantages such as complications in manufacturing, costly production, and also requires refrigeration and multiple injections. Epitope-based vaccines, including varied mixtures of conserved virulence proteins, are a promising alternative to the existing capsular antigen vaccines. In this study, it has been tried to design an efficient subunit vaccine in order to elicit both CTL and HTL responses. The immunodominant epitopes from highly protective antigens of <i>S. pneumoniae</i> (PspA, CbpA, PiuA, and PhtD) were selected from different databanks, such as IEDB, PROPRED, RANKPEP, and MHCPRED. The PspA and CbpA were chosen as CTL epitope stimulants, and PhtD and PiuA were defined as helper epitopes. Because of low immunogenicity of epitope vaccines, PorB protein as a TLR2 agonist was employed to increase the immunogenicity of the vaccine. All the peptide segments were fused to each other by proper linkers, and the physicochemical, structural, and immunological characteristics of the construct were also evaluated. To achieve a high-quality 3 D structure of the protein, modeling, refinement, and validation of the final construct were done. Docking and molecular dynamics analyses demonstrated an appropriate and stable interaction between the vaccine and TLR2 during the simulation period. The computational studies suggested the designed vaccine as a novel construct, capable to elicit efficient humoral and cellular immunities, which are crucial for protection against <i>S. pneumoniae</i>. Communicated by Ramaswamy H. Sarma
DOI: 10.7284/129772
title: SSV (Sound Speed Velocimeter) data collected during research cruise FK180824 using a Valeport MiniSVS instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7580186.v1
title: Vaccinomics approach for developing multi-epitope peptide pneumococcal vaccine

description: <i>Streptococcus pneumoniae</i> is a leading cause of some diseases such as pneumonia, sepsis, and meningitis mostly in children less than 5 years of age. Presently, two types of pneumococcal vaccine are available on the market: polysaccharide vaccines (PPV) that are based on capsular polysaccharides of at least 92 different serotypes, and protein-conjugated polysaccharide vaccine (PCV). The PPVs such as PPV23 do not stimulate efficient protective immunity in children under 2 years old, while the PCVs such as PCV7, PCV10, and PCV13 that cover 7, 10, and 13 serotypes, respectively, highly protect newborns, but have some disadvantages such as complications in manufacturing, costly production, and also requires refrigeration and multiple injections. Epitope-based vaccines, including varied mixtures of conserved virulence proteins, are a promising alternative to the existing capsular antigen vaccines. In this study, it has been tried to design an efficient subunit vaccine in order to elicit both CTL and HTL responses. The immunodominant epitopes from highly protective antigens of <i>S. pneumoniae</i> (PspA, CbpA, PiuA, and PhtD) were selected from different databanks, such as IEDB, PROPRED, RANKPEP, and MHCPRED. The PspA and CbpA were chosen as CTL epitope stimulants, and PhtD and PiuA were defined as helper epitopes. Because of low immunogenicity of epitope vaccines, PorB protein as a TLR2 agonist was employed to increase the immunogenicity of the vaccine. All the peptide segments were fused to each other by proper linkers, and the physicochemical, structural, and immunological characteristics of the construct were also evaluated. To achieve a high-quality 3 D structure of the protein, modeling, refinement, and validation of the final construct were done. Docking and molecular dynamics analyses demonstrated an appropriate and stable interaction between the vaccine and TLR2 during the simulation period. The computational studies suggested the designed vaccine as a novel construct, capable to elicit efficient humoral and cellular immunities, which are crucial for protection against <i>S. pneumoniae</i>. Communicated by Ramaswamy H. Sarma
DOI: 10.7284/129774
title: TSG (Thermosalinograph) data collected during research cruise FK180824 using a Sea-Bird SBE-45 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129752
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise FK181005 using a Hawaii UHDAS instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129750
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise FK181005 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7580030
title: Philippine Broadbill RAD dataset

description: Three file formats for both the 50% and 75% coverage matrices.<br>Full fasta alignments (.fasta), Nexus alignments (.nex), and SNP matrices in STRUCTURE format (.tsv).
DOI: 10.6084/m9.figshare.7580030.v1
title: Philippine Broadbill RAD dataset

description: Three file formats for both the 50% and 75% coverage matrices.<br>Full fasta alignments (.fasta), Nexus alignments (.nex), and SNP matrices in STRUCTURE format (.tsv).
DOI: 10.6084/m9.figshare.7580036.v1
title: Data for rotational tillage

description: Data for manuscript entitled " <i>Rotational tillage: a sustainable management for wheat production in semiarid Loess Plateau </i>".
DOI: 10.6084/m9.figshare.7580018
title: TABELA III - TESE - METABÓLITOSTese

description: TABELA III - CONTIDA NA QUALIFICAÇÃO (METABÓLITOS)<br>Dados modelados como resultados de minha pesquisa de doutorado.
DOI: 10.7284/129751
title: Expendable Probe data collected during research cruise FK181005 using a Turo Quoll instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7580009
title: TABELA II - TESE - CONTROLETese

description: TABELA II - CONTIDA NA QUALIFICAÇÃO (CONTROLES)<br>Dados modelados como resultados de minha pesquisa de doutorado.
DOI: 10.6084/m9.figshare.7580018.v1
title: TABELA III - TESE - METABÓLITOS

description: TABELA III - CONTIDA NA QUALIFICAÇÃO (METABÓLITOS)<br>Dados modelados como resultados de minha pesquisa de doutorado.
DOI: 10.6084/m9.figshare.7580003
title: TABELA I - TESE - TODASTese

description: TABELA I - CONTIDA NA QUALIFICAÇÃO<br>Dados modelados como resultados de minha pesquisa de doutorado.
DOI: 10.6084/m9.figshare.7580024.v1
title: TABELA IV - TESE - HIV

description: TABELA IV - CONTIDA NA QUALIFICAÇÃO<br>Dados modelados como resultados de minha pesquisa de doutorado.<br>As moléculas foram retiradas do banco de dados de estruturas químicas ChEMBL (https://www.ebi.ac.uk/chembl), utilizando como parâmetros de busca o HIV como target, considerando a IC50 como atividade e ação nas três enzimas: protease, integrase e transcriptase reversa (PROTEIN).<br>Os descritores foram gerados no software livre CDK (http://www.rguha.net/code/java/cdkdesc.html)
DOI: 10.7284/129754
title: Fluorometer data collected during research cruise FK181005 using a WET Labs ECO-FLNTU instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7580003.v1
title: TABELA I - TESE - TODAS

description: TABELA I - CONTIDA NA QUALIFICAÇÃO<br>Dados modelados como resultados de minha pesquisa de doutorado.
DOI: 10.6084/m9.figshare.7580009.v2
title: TABELA II - TESE - CONTROLE

description: TABELA II - CONTIDA NA QUALIFICAÇÃO (CONTROLES)<br>Dados modelados como resultados de minha pesquisa de doutorado.
DOI: 10.6084/m9.figshare.7580009.v1
title: Untitled Item

description: TABELA II - CONTIDA NA QUALIFICAÇÃO (CONTROLES)<br>Dados modelados como resultados de minha pesquisa de doutorado.
DOI: 10.6084/m9.figshare.7579961
title: The effects of the invasive Harrisia cactus mealybug (Hypogeococcus sp.) and exotic lianas (Jasminum fluminense) on Puerto Rican native cacti survival and reproduction - Data

description: This is the data used to determine Harrisia Cactus Mealybug (HCM), Hypogeococcus sp. (Hemiptera: Pseudococcidae) on cactus mortality and reproduction. This data was collected in a period of 4 years. Each site was visit twice, one initial visit to determine the initial conditions of each cactus survey and then 1.5-2 years after. For more details on the collection of the data, see: Carrera-Martínez, R., Aponte-Díaz, L., Ruiz-Arocho, J., Lorenzo-Ramos, A. & Jenkins, D.A. (2019) The effects of the Harrisia cactus mealybug and invasive lianas on cacti survival and flower and fruit production. Biological Invasions. DOI: 10.1007/s10530-019-02046-1
DOI: 10.7284/129749
title: GNSS (Global Navigation Satellite System) data collected during research cruise FK181005 using a C&C C-Nav 3050 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7579961.v1
title: The effects of the invasive Harrisia cactus mealybug (Hypogeococcus sp.) and exotic lianas (Jasminum fluminense) on Puerto Rican native cacti survival and reproduction - Data

description: This is the data used to determine Harrisia Cactus Mealybug (HCM), Hypogeococcus sp. (Hemiptera: Pseudococcidae) on cactus mortality and reproduction. This data was collected in a period of 4 years. Each site was visit twice, one initial visit to determine the initial conditions of each cactus survey and then 1.5-2 years after. For more details on the collection of the data, see: Carrera-Martínez, R., Aponte-Díaz, L., Ruiz-Arocho, J., Lorenzo-Ramos, A. & Jenkins, D.A. (2019) The effects of the Harrisia cactus mealybug and invasive lianas on cacti survival and flower and fruit production. Biological Invasions. DOI: 10.1007/s10530-019-02046-1
DOI: 10.6084/m9.figshare.7579937
title: Why the World Reads Wikipedia

description: This project contains data for the paper: <br><i><br></i>Lemmerich, Florian, Diego Sáez-Trumper, Robert West, and Leila Zia. "Why the World Reads Wikipedia: Beyond English Speakers." <i>Proceedings of the Twelfth ACM International Conference on Web Search and Data Mining (WSDM)</i>. ACM, 2019.<br>From the abstract:<br>As one of the Web's primary multilingual knowledge sources, Wikipedia is read by millions of people across the globe every day. Despite this global readership, little is known about why users read Wikipedia's various language editions. To bridge this gap, we conduct a comparative study by combining a large-scale survey of Wikipedia readers across 14 language editions with a log-based analysis of user activity. We proceed in three steps. First, we analyze the survey results to compare the prevalence of Wikipedia use cases across languages, discovering commonalities, but also substantial differences, among Wikipedia languages with respect to their usage. Second, we match survey responses to the respondents' traces in Wikipedia's server logs to characterize behavioral patterns associated with specific use cases, finding that distinctive patterns consistently mark certain use cases across language editions. Third, we show that certain Wikipedia use cases are more common in countries with certain socio-economic characteristics; e.g., in-depth reading of Wikipedia articles is substantially more common in countries with a low Human Development Index. These findings advance our understanding of reader motivations and behaviors across Wikipedia languages and have implications for Wikipedia editors and developers of Wikipedia and other Web technologies. <br>The data is described in the README as well as here on this meta page.<br><br>For more information, see the:* wiki page* blogpost* paper* mirror of data
DOI: 10.7284/129748
title: Gyrocompass data collected during research cruise FK181005 using a Raytheon STD 22 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129758
title: Multibeam Echosounder data collected during research cruise FK181005 using a Kongsberg EM302 instrument system onboard the platform RV Falkor

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7579790
title: Serum Lipids

description: Lipids were extracted from serum samples in methanol:dicholoromethane in the presence of internal standards by Metabolon, Inc. The extracts were concentrated under nitrogen and reconstituted in 0.25 mL of 10 mM ammonium acetate dichloromethane:methanol (50:50). The extracts were transferred to inserts and placed in vials for infusion-MS analysis, performed on a Shimazdu LC with nano PEEK tubing and the Sciex Selexlon-5500 QTRAP. Samples were analyzed via both positive and negative mode electrspray. The 5500 QTRAP scan was performed in MRM mode, with more than 1,100 MRMs.