cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26639461.v1
title: Additional file 1 of Neuromolecular responses in disrupted mutualistic cleaning interactions under future environmental conditions

description: Additional file 1: Table S1. Seawater physicochemical parameters in the experimental setups for (N=24) L. dimidiatus and (N=24)A. leucosternon individuals exposed to four conditions: one i) control with present day environmental conditions (29 °C, pH 8.1, pCO2 ~ 400 μatm), ii) warming scenario referred to as elevated ‘warming (32 °C, pH 8.1, pCO2 ~400 μatm), iii) ocean acidification referred to as ‘high CO2’ (29 °C, pH 7.7, pCO2 ~1000 μatm) and a combined condition of iv)‘warming & high CO2’ (32 °C, pH 7.7, pCO2 ~1000 μatm). These parameters follow the IPCC’s RCP scenario 8.5. Table S2. Individual brain dissections data for L. dimidiatus and A. leucosternon for each environmental condition. Brain regions dissected: forebrain (FB), midbrain (MB) and hindbrain (HB). Standard length (SL) and Weight (W) is provided for each individual used in the study. Table S3a. Behavioural trial data for each aquarium setup for individuals of L. dimidiatus and A. leucosternon assigned for control, warming, high CO2 and warming & high CO2. NCBI Biosample accession numbers of behavioural trials are provided. Table S3b. Analysis of Deviance Table (Type II tests) for each behavioural attribute tested during behavioural trials between L. dimidiatus and A. leucosternon. Significant values (*) considered with a p&lt;0.05.Table S3c. Contrast of the post hoc multiple comparisons based on environmental conditions tested: Control, high CO2, warming and warming & high CO2. Significant values (*) considered with a p&lt;0.05. Table S4. Enriched Gene Ontology (GO) terms for the differentially expressed genes shared among conditions of warming, high CO2 and warming & high CO2 for L. dimidiatus (N=672). Table S5. Enriched Gene Ontology (GO) terms for the differentially expressed genes shared among conditions of warming, high CO2 and warming & high CO2 for A. leucosternon (N=30). Table S6a. Specific Enriched Gene Ontology (GO) terms expressed for L. dimidiatus during the warming condition. Table S6b. Enriched Gene Ontology (GO) terms expressed the Forebrain region (FB) of L. dimidiatus during the warming condition. Table S6c. Enriched Gene Ontology (GO) terms for the Midbrain region (MB) of L. dimidiatus during the warming condition. Table S7. Specific Enriched Gene Ontology (GO) terms expressed for A. leucosternon during the warming condition. Table S8. Specific Enriched Gene Ontology (GO) terms expressed for L. dimidiatus during the high CO2 condition. Table S9. Specific Enriched Gene Ontology (GO) terms expressed for A. leucosternon during the high CO2 condition. Table S10a. Differential expressed genes found for L. dimidiatus during the warming &high CO2 condition (4581). Table S10b. Specific Enriched Gene Ontology (GO) terms expressed for L. dimidiatus during the warming & high CO2 condition. Table S11. Specific Enriched Gene Ontology (GO) terms expressed for A. leucosternon during the warming & high CO2 condition.
DOI: 10.6084/m9.figshare.26638461
title: Additional file 4 of Exploration of biomarkers for systemic lupus erythematosus by machine-learning analysis

description: Additional file 4: Table S4. GSEA results.
DOI: 10.6084/m9.figshare.26639461
title: Additional file 1 of Neuromolecular responses in disrupted mutualistic cleaning interactions under future environmental conditions

description: Additional file 1: Table S1. Seawater physicochemical parameters in the experimental setups for (N=24) L. dimidiatus and (N=24)A. leucosternon individuals exposed to four conditions: one i) control with present day environmental conditions (29 °C, pH 8.1, pCO2 ~ 400 μatm), ii) warming scenario referred to as elevated ‘warming (32 °C, pH 8.1, pCO2 ~400 μatm), iii) ocean acidification referred to as ‘high CO2’ (29 °C, pH 7.7, pCO2 ~1000 μatm) and a combined condition of iv)‘warming & high CO2’ (32 °C, pH 7.7, pCO2 ~1000 μatm). These parameters follow the IPCC’s RCP scenario 8.5. Table S2. Individual brain dissections data for L. dimidiatus and A. leucosternon for each environmental condition. Brain regions dissected: forebrain (FB), midbrain (MB) and hindbrain (HB). Standard length (SL) and Weight (W) is provided for each individual used in the study. Table S3a. Behavioural trial data for each aquarium setup for individuals of L. dimidiatus and A. leucosternon assigned for control, warming, high CO2 and warming & high CO2. NCBI Biosample accession numbers of behavioural trials are provided. Table S3b. Analysis of Deviance Table (Type II tests) for each behavioural attribute tested during behavioural trials between L. dimidiatus and A. leucosternon. Significant values (*) considered with a p&lt;0.05.Table S3c. Contrast of the post hoc multiple comparisons based on environmental conditions tested: Control, high CO2, warming and warming & high CO2. Significant values (*) considered with a p&lt;0.05. Table S4. Enriched Gene Ontology (GO) terms for the differentially expressed genes shared among conditions of warming, high CO2 and warming & high CO2 for L. dimidiatus (N=672). Table S5. Enriched Gene Ontology (GO) terms for the differentially expressed genes shared among conditions of warming, high CO2 and warming & high CO2 for A. leucosternon (N=30). Table S6a. Specific Enriched Gene Ontology (GO) terms expressed for L. dimidiatus during the warming condition. Table S6b. Enriched Gene Ontology (GO) terms expressed the Forebrain region (FB) of L. dimidiatus during the warming condition. Table S6c. Enriched Gene Ontology (GO) terms for the Midbrain region (MB) of L. dimidiatus during the warming condition. Table S7. Specific Enriched Gene Ontology (GO) terms expressed for A. leucosternon during the warming condition. Table S8. Specific Enriched Gene Ontology (GO) terms expressed for L. dimidiatus during the high CO2 condition. Table S9. Specific Enriched Gene Ontology (GO) terms expressed for A. leucosternon during the high CO2 condition. Table S10a. Differential expressed genes found for L. dimidiatus during the warming &high CO2 condition (4581). Table S10b. Specific Enriched Gene Ontology (GO) terms expressed for L. dimidiatus during the warming & high CO2 condition. Table S11. Specific Enriched Gene Ontology (GO) terms expressed for A. leucosternon during the warming & high CO2 condition.
DOI: 10.6084/m9.figshare.26639494
title: Additional file 5 of MBD4 loss results in global reactivation of promoters and retroelements with low methylated CpG density

description: Additional file 5: Supplementary Tables 3 and 4. Methylation information for promoters in MEFs WT (3) or KO (4) for Mbd4. These tables list each mouse RRBS covered promoter with the following information: genomic annotation, gene name, coverage depth, percentage of C methylated and average methylation level of 5mC in each sequence context (CG, CHG, CHG, H represents non-G base).
DOI: 10.6084/m9.figshare.24547066.v1
title: Additional file 2 of Exploration of biomarkers for systemic lupus erythematosus by machine-learning analysis

description: Additional file 2: Table S2. Sequences of Primers for the real-time qPCR.
DOI: 10.6084/m9.figshare.26638461.v1
title: Additional file 4 of Exploration of biomarkers for systemic lupus erythematosus by machine-learning analysis

description: Additional file 4: Table S4. GSEA results.
DOI: 10.6084/m9.figshare.26638470
title: Additional file 7 of Exploration of biomarkers for systemic lupus erythematosus by machine-learning analysis

description: Additional file 7: Table S7. 34 candidate feature genes from LASSO algorithm.
DOI: 10.6084/m9.figshare.26638458
title: Additional file 3 of Exploration of biomarkers for systemic lupus erythematosus by machine-learning analysis

description: Additional file 3: Table S3. 242 DEGs between control normal and SLE samples.
DOI: 10.6084/m9.figshare.26638473.v1
title: Additional file 8 of Exploration of biomarkers for systemic lupus erythematosus by machine-learning analysis

description: Additional file 8: Table S8. 58 feature genes from SVM-REF algorithm.
DOI: 10.6084/m9.figshare.26638470.v1
title: Additional file 7 of Exploration of biomarkers for systemic lupus erythematosus by machine-learning analysis

description: Additional file 7: Table S7. 34 candidate feature genes from LASSO algorithm.
DOI: 10.15468/dl.r2wkqj
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.84112 -34.376977, 148.84112 -34.379223, 148.843365 -34.379223, 148.843365 -34.383715, 148.84112 -34.383715, 148.84112 -34.390452, 148.845611 -34.390452, 148.845611 -34.392698, 148.850103 -34.392698, 148.850103 -34.379223, 148.845611 -34.379223, 148.845611 -34.376977, 148.84112 -34.376977))"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071081-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.exp7js
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "Geometry POLYGON((95.06461 -13.27817,133.93539 -13.27817,133.93539 2.27817,95.06461 2.27817,95.06461 -13.27817))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Microhyla orientalis Matsui, Hamidy & Eto, 2013",
 "Year 2004-2024"
 ]
}

 The dataset includes 23 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071082-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26638440
title: Additional file 3 of DNA methylation sites in early adulthood characterised by pubertal timing and development: a twin study

description: Additional file 3. Table S1. Sample sizes and final numbers of complete twin pairs included in 450K and EPIC platforms for EWAS designs on PDS and PA. Table S2. Details on univariate twin modelling results on the 14 CpG sites. The estimates for total phenotypic variance and mean, as well as the coefficients of the covariates (age and sex), are shown. Table S3. Individual associations and within-twin pair methylation differences of the 58 CpG sites identified in the EWAS. Table S4. Results of qualitative and quantitative sex differences for omnibus tests and specific parameters on CpG sites. Table S5. CpG sites associated with pubertal development scale (PDS) with a standardised effect size &gt; |0.13| stratified by the model. Table S6. CpG sites associated with pubertal age (PA) in males or females with a standardised effect size &gt; |0.13|. Table S7. CpG sites associated with pubertal development scale (PDS) or pubertal age (PA) with a standardised effect size &gt; |0.13| enriched in canonical pathways from the Ingenuity Pathway Analysis. Table S8. CpG sites associated with pubertal development scale (PDS) or pubertal age (PA) with a standardised effect size &gt; |0.13| enriched in diseases and functions from the Ingenuity Pathway Analysis. Table S9. IPA results on meQTLs (p &lt; 5 x 10-8) of CpG sites associated with pubertal development scale (PDS) or pubertal age (PA). Both the Ingenuity Canonical pathways and diseases/functions annotations are included.
DOI: 10.6084/m9.figshare.26638440.v1
title: Additional file 3 of DNA methylation sites in early adulthood characterised by pubertal timing and development: a twin study

description: Additional file 3. Table S1. Sample sizes and final numbers of complete twin pairs included in 450K and EPIC platforms for EWAS designs on PDS and PA. Table S2. Details on univariate twin modelling results on the 14 CpG sites. The estimates for total phenotypic variance and mean, as well as the coefficients of the covariates (age and sex), are shown. Table S3. Individual associations and within-twin pair methylation differences of the 58 CpG sites identified in the EWAS. Table S4. Results of qualitative and quantitative sex differences for omnibus tests and specific parameters on CpG sites. Table S5. CpG sites associated with pubertal development scale (PDS) with a standardised effect size &gt; |0.13| stratified by the model. Table S6. CpG sites associated with pubertal age (PA) in males or females with a standardised effect size &gt; |0.13|. Table S7. CpG sites associated with pubertal development scale (PDS) or pubertal age (PA) with a standardised effect size &gt; |0.13| enriched in canonical pathways from the Ingenuity Pathway Analysis. Table S8. CpG sites associated with pubertal development scale (PDS) or pubertal age (PA) with a standardised effect size &gt; |0.13| enriched in diseases and functions from the Ingenuity Pathway Analysis. Table S9. IPA results on meQTLs (p &lt; 5 x 10-8) of CpG sites associated with pubertal development scale (PDS) or pubertal age (PA). Both the Ingenuity Canonical pathways and diseases/functions annotations are included.
DOI: 10.6084/m9.figshare.26638587
title: Additional file 3 of Photoactivated chromophore-corneal cross-linking accelerates corneal healing in fungal keratitis: an updated meta-analysis

description: Additional file 3: Supplementary material 3. Data extraction.
DOI: 10.6084/m9.figshare.26638596
title: Additional file 6 of Photoactivated chromophore-corneal cross-linking accelerates corneal healing in fungal keratitis: an updated meta-analysis

description: Additional file 6: Supplementary material 6. PACK-CXL for infectious keratitis.
DOI: 10.6084/m9.figshare.26718555
title: Additional file 5 of A culture-independent approach, supervised machine learning, and the characterization of the microbial community composition of coastal areas across the Bay of Bengal and the Arabian Sea

description: Additional file 5.
DOI: 10.15468/dl.8z3n83
title: Occurrence Download

description: A dataset containing 210 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "Geometry POLYGON((106.97571 -8.01282,137.02429 -8.01282,137.02429 4.01282,106.97571 4.01282,106.97571 -8.01282))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Polypedates iskandari Riyanto, Mumpuni & McGuire, 2011",
 "Year 2004-2024"
 ]
}

 The dataset includes 210 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071083-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26718567
title: Additional file 9 of A culture-independent approach, supervised machine learning, and the characterization of the microbial community composition of coastal areas across the Bay of Bengal and the Arabian Sea

description: Additional file 9.
DOI: 10.6084/m9.figshare.26639470.v1
title: Additional file 1 of Prediction of postoperative complications after hepatectomy with dynamic monitoring of central venous oxygen saturation

description: Additional file 1.
DOI: 10.15468/dl.d4pnwu
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.726584 -34.383715, 148.726584 -34.38596, 148.72883 -34.38596, 148.72883 -34.383715, 148.726584 -34.383715)), ((148.72883 -34.38596, 148.72883 -34.390452, 148.733321 -34.390452, 148.733321 -34.392698, 148.735567 -34.392698, 148.735567 -34.38596, 148.72883 -34.38596)))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071084-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26724944
title: Additional file 4 of Exploring T-cell exhaustion features in Acute myocardial infarction for a Novel Diagnostic model and new therapeutic targets by bio-informatics and machine learning

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.26716909.v1
title: Additional file 10 of Stable, fluorescent markers for tracking synthetic communities and assembly dynamics

description: Additional file 10: Table S5. Flow repository codes for flow cytometry data used in this study
DOI: 10.6084/m9.figshare.26638596.v1
title: Additional file 6 of Photoactivated chromophore-corneal cross-linking accelerates corneal healing in fungal keratitis: an updated meta-analysis

description: Additional file 6: Supplementary material 6. PACK-CXL for infectious keratitis.
DOI: 10.6084/m9.figshare.26638758.v1
title: Additional file 3 of Diagnosis of Crohn’s disease and ulcerative colitis using the microbiome

description: Additional file 3: Supplementary Table 2. Differences in the taxonomic composition of the gut microbiome in patients with CD and UC. Supplementary Table 3. Metacyc pathway of the different gut microbiomes (CD VS UC). Supplementary Table 4. KEGG Orthology of the different gut microbiomes (CD VS UC). Supplementary Table 5. Differences in the taxonomic composition of the gut microbiome in HC and CD. Supplementary Table 6. Differences in the taxonomic composition of the gut microbiome in mild and Moderate patients with CD. Supplementary Table 7. Correlation between microbes and severity of CD. Supplementary Table 8. Differences in the taxonomic composition of the gut microbiome in HC and UC. Supplementary Table 9. Differences in the taxonomic composition of the gut microbiome in mild and Severe patients with UC. Supplementary Table 10. Correlation between microbes and the severity of UC. Supplementary Table 11. Microbial coefficients used for modeling
DOI: 10.25346/s6eecgix/c55gev
title: msXL_334r_15_10.tif
DOI: 10.15468/dl.agpkm2
title: Occurrence Download

description: A dataset containing 522 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Battus laodamas",
 "Year 1965-2015"
 ]
}

 The dataset includes 522 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037112-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pahs2d
title: Occurrence Download

description: A dataset containing 1045 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Hyalinobatrachium"
 ]
}

 The dataset includes 1045 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037113-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/3nmw-gcxd-600m
title: Nairobi, Kenya High Resolution BUFR Radiosonde Data. Version 1.0

description: This data set contains temperature, moisture, and wind profiles from the Modem GPSonde M10 radiosonde system operated by the Kenya Meteorology Department in Nairobi, Kenya during the HIGH impact Weather LAke SYstem (HIGHWAY) Project data collection period. A total of 256 2-second vertical resolution soundings are included in the data set. The data are in BUFR (Binary Universal Form for data Representation) format.
DOI: 10.15468/dl.vw6j6y
title: Occurrence Download

description: A dataset containing 276 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "OccurrenceStatus is Present",
 "TaxonKey is Peromyscus leucopus",
 "Year 2000-2025"
 ]
}

 The dataset includes 276 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037115-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.exq7ph
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cinara cedri",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037116-250920141307145/datasets/export for details.
DOI: 10.15468/dl.jvpw6u
title: Occurrence Download

description: A dataset containing 81594 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "OccurrenceStatus is Present",
 "TaxonKey is Rodentia"
 ]
}

 The dataset includes 81594 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037075-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/g5qq-7ck0-7j02
title: TAHMO Surface Meteorological Data. Version 1.0

description: This data set includes the five minute resolution surface meteorological observations from the TAHMO (Trans-African HydroMeteorological Observatory) meteorological stations around the Lake Victoria region of Africa. These data are in a columnar ASCII format.
DOI: 10.15468/dl.44zn8p
title: Occurrence Download

description: A dataset containing 140 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EDP Baixo Sabor: Construction and Reservoir Filling Phases - Eagle Owl (Bubo bubo) & Nocturnal Birds Surveys - [2010-2014]"
 ]
}

 The dataset includes 140 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037117-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vcenxa
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dysaphis tulipae",
 "Country is Croatia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037118-250920141307145/datasets/export for details.
DOI: 10.15468/dl.rm4wwn
title: Occurrence Download

description: A dataset containing 307230850 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Occurrence evidence, Living Specimen, Specimen, Material citation, Material sample, Human Observation, Machine Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is July",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 307230850 records from 26386 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037035-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.