cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.71537/79qp-5h35
title: The influence of various combinations of immunosuppressive drugs on the processes of proliferation and apoptosis and the expression of selected aquaporins in the rat testis and epididymis

description: <p>This data presents the results of research conducted as part of the MINIATURA5 project, entitled “The influence of various combinations of immunosuppressive drugs on the processes of proliferation and apoptosis and the expression of selected aquaporins in the rat testis and epididymis — preliminary studies”, which was funded by the National Science Center in Poland (grant No. DEC-2021/05/X/NZ7/00721).</p><p>This part of the project aimed to determine changes in morphology and the percentage of cells undergoing apoptosis and expressing the proliferation marker Ki-67 protein in the male gonad of rats that had been administered immunosuppressive drugs in various combinations.</p><p>This dataset contains:</p><p>• raw data from the measurement of testis weight;</p><p>• Raw data from morphometric studies;</p><p>• Raw data from the examination of the percentage of Ki67-positive cells.</p><p>• Raw data from the examination of the percentage of TUNEL-positive cells.</p><p> </p><p>The file titled &#34;READ ME.docx&#34; contains all the necessary information regarding the aforementioned data, as well as instructions for viewing it.</p><p><br /></p>
DOI: 10.26008/1912/bco-dmo.824665.2
title: Fluorescence per phytoplankton cell from each of six experiments quantifying the ingestion by copepods of marine snow and phytoplankton at different phytoplankton growth phases

description: Fluorescence per phytoplankton cell from each of six experiments quantifying the ingestion by copepods of marine snow and phytoplankton at different phytoplankton growth phases.
DOI: 10.26008/1912/bco-dmo.839920.1
title: Experimental coral physiological and δ15N isotopic measurements in October 2012 at Reef Systems Coral Farm, Ohio.

description: Experimental coral physiological and δ15N isotopic measurements in October 2012 at Reef Systems Coral Farm, Ohio.
DOI: 10.26008/1912/bco-dmo.860674.1
title: Effect of Marine Snow Distribution on Copepod Ingestion of Marine Snow Experiments 2018

description: These data are from a set of 2 experiments quantifying the ingestion by copepods of marine snow with different food distributions (layer vs. homogenous). Experiments were conducted in July 2018 in the Prairie research lab at the University of San Diego, California, USA.
DOI: 10.26008/1912/bco-dmo.740939.1
title: Chlorophyll and phaeopigment concentrations from near-surface profiles collected using the conventional CTD in the Southern Drake Passage and Antarctic Peninsular region on RVIB Nathaniel B. Palmer cruise NBP 16-08 from September to October 2016

description: This dataset includes chlorophyll and phaeopigment concentrations from near-surface profiles collected using the conventional CTD in the Southern Drake Passage and Antarctic Peninsular region on RVIB Nathaniel B. Palmer cruise NBP 16-08 from September to October 2016.
DOI: 10.26008/1912/bco-dmo.742206.1
title: Chlorophyll and phaeopigment concentrations from incubation experiments performed with amended Southern Drake Passage on RVIB Nathaniel B. Palmer cruise NBP 16-08 from September to October 2016

description: This dataset includes chlorophyll and phaeopigment concentrations from incubation experiments performed with amended Southern Drake Passage on RVIB Nathaniel B. Palmer cruise NBP 16-08 from September to October 2016.
DOI: 10.26008/1912/bco-dmo.736702.1
title: Counts of picocyanobacteria from SMILE cruise (SKQ201703S) at the North Pacific Subtropical Front in March 2017

description: This dataset includes counts of picocyanobacteria from SMILE cruise (SKQ201703S) at the North Pacific Subtropical Front in March 2017.
DOI: 10.26008/1912/bco-dmo.754623.1
title: NCBI accession numbers and associated metadata for raw low-coverage genomic sequence reads from 876 different Atlantic silverside individuals

description: NCBI accession numbers and associated metadata for raw low-coverage genomic sequence reads from 876 different Atlantic silverside individuals
DOI: 10.26008/1912/bco-dmo.809272.1
title: Thermovibrio ammonificans HB1 genome manual curation

description: Thermovibrio ammonificans HB1 genome manual curation. Methods are further described in Giovannelli et al. (2012).
DOI: 10.26008/1912/bco-dmo.869148.1
title: Mesocosm study of trophic interactions under ocean acidification, focusing on snail responses Bodega Bay, CA.

description: This dataset represents a mesocosm study of trophic interactions under ocean acidification, focusing on snail responses in Bodega Bay, California. This dataset is part of a larger experiment to investigate how pH influences trophic links between intertidal sea stars (Leptasterias hexactis), snails (Tegula funebralis), and macroalgae (Mazzaella flaccida).
DOI: 10.26008/1912/bco-dmo.870832.1
title: Dissolved inorganic carbon (DIC) fixation and dissolved organic carbon (DOC) release measurements of marine nitrifier cultures grown under different culture conditions

description: This dataset contains dissolved inorganic carbon (DIC) fixation and dissolved organic carbon (DOC) release measurements of marine nitrifier cultures grown under different culture conditions. These data were generated through experiments conducted at the University of California, Santa Barbara over a period of time from December 2020 to August 2021.
DOI: 10.26008/1912/bco-dmo.871075.1
title: Cellular carbon (C) and nitrogen (N) measurements of marine nitrifiers

description: This dataset contains cellular carbon (C) and nitrogen (N) measurements of marine nitrifiers. These data were generated through experiments conducted at the University of California, Santa Barbara over a period of time from March 2018 to August 2021.
DOI: 10.26008/1912/bco-dmo.866359.1
title: Mesocosm study of trophic interactions under ocean acidification, focusing on the consumption of algae by snails in Bodega Bay, California

description: This dataset represents a mesocosm study of trophic interactions under ocean acidification, focusing on the consumption of algae by snails in Bodega Bay, California. This dataset is part of a larger experiment to investigate how pH influences trophic links between intertidal sea stars (Leptasterias hexactis), snails (Tegula funebralis), and macroalgae (Mazzaella flaccida).
DOI: 10.26008/1912/bco-dmo.869110.1
title: Water chemistry during mesocosm study of trophic interactions under ocean acidification in Bodega Bay, CA.

description: This dataset provides water chemistry data during a mesocosm study of trophic interactions among intertidal sea stars (Leptasterias hexactis), snails (Tegula funebralis), and macroalgae (Mazzaella flaccida) under ocean acidification in Bodega Bay, CA.
DOI: 10.26008/1912/bco-dmo.866365.1
title: Mesocosm study of trophic interactions under ocean acidification, focusing on sea star behavior in Bodega Bay, CA.

description: This dataset represents a mesocosm study of trophic interactions under ocean acidification, focusing on sea star behavior in Bodega Bay, California.  This study is part of a larger experiment to investigate how pH influences trophic links between intertidal sea stars (Leptasterias hexactis), snails (Tegula funebralis), and macroalgae (Mazzaella flaccida).
DOI: 10.26008/1912/bco-dmo.869189.1
title: Mesocosm study of trophic interactions under ocean acidification, focusing on the consumption of snails by sea stars in Bodega Bay, CA.

description: This dataset represents a mesocosm study of trophic interactions under ocean acidification, focusing on the consumption of snails by sea stars in Bodega Bay, California. This dataset is part of a larger experiment to investigate how pH influences trophic links between intertidal sea stars (Leptasterias hexactis), snails (Tegula funebralis), and macroalgae (Mazzaella flaccida).
DOI: 10.26008/1912/bco-dmo.869574.1
title: Data on whelk morphometrics from the Bodega Marine Laboratory, University of California, Davis in May-August of 2017.

description: We conducted laboratory experiments to test whether previous predator exposure had a sustained effect on prey foraging and in turn on a basal resource, even after the predator was removed. We tested for both behavioral and morphological legacies of prior predation. The study system consisted of a tri-trophic food chain, using the red rock crab, Cancer productus, as the predator, the carnivorous whelk, Nucella ostrina, as the prey species, and the California mussel, Mytilus californianus, as the basal resource. This dataset represents morphometrics data of Whelks at the start and end of the experiment from the Bodega Marine Laboratory, University of California, Davis in May-August of 2017.
DOI: 10.26008/1912/bco-dmo.869361.1
title: Average conditions and chemical fluxes during mussel bed experiments at the Bodega Marine Laboratory, University of California, Davis in 2017.

description: This dataset represents average conditions and chemical fluxes during mussel bed experiments where chemistry (pH and O2) was measured at defined heights within and above the mussel bed. These data describe average conditions outside of the mussel bed during each profile sampled at the Bodega Marine Laboratory, University of California, Davis in 2017.
DOI: 10.26008/1912/bco-dmo.869563.1
title: Anti-predatory and foraging behaviors of whelks from laboratory experiments at Bodega Marine Laboratory in 2017

description: To investigate anti-predatory and foraging behaviors of whelks, we conducted laboratory experiments at Bodega Marine Laboratory in 2017 to test whether previous predator exposure had a sustained effect on prey foraging and in turn on a basal resource, even after the predator was removed. We tested for both behavioral and morphological legacies of prior predation. The study system consisted of a tri-trophic food chain, using the red rock crab, Cancer productus, as the predator, the carnivorous whelk, Nucella ostrina, as the prey species, and the California mussel, Mytilus californianus, as the basal resource.
DOI: 10.26008/1912/bco-dmo.866304.1
title: Vertical profiles of chemistry within and above a mussel bed established in a laboratory flow tunnel at the Bodega Marine Laboratory, CA in 2017.

description: This dataset represents vertical profiles of chemistry within and above a mussel bed established in a laboratory flow tunnel at the Bodega Marine Laboratory, University of California, Davis in 2017.  Alkalinity profiles using pH and O2 profiles were used to calculate calcification and respiration rates of mussel beds.
DOI: 10.26008/1912/bco-dmo.869374.1
title: Thermal buffering potential of mussels across latitude from a study on the West coast of the United States from June to October of 2012 and 2013.

description: This datasets represent a study of thermal buffering potential of mussels across latitude on the West coast of the United States from June - October of 2012 and 2013. We measured marine intertidal habitat temperatures on horizontal surfaces in experimentally formed rock clearings and inside two different biogenic habitats dominated by the foundation species Mytilus californianus Conrad 1837, the California mussel, and the turf-forming ‘black pine’ alga, Neorhodomela larix (Turner) Masuda, 1982.
DOI: 10.26008/1912/bco-dmo.870783.1
title: Nutrient and metabolic fluxes on oyster reefs from the Choptank River and Harris Creek, Maryland data from June through August of 2017 (published in Jackson et al., 2018)

description: This dataset contains the nutrient and metabolic fluxes data that was published in Jackson et al. (2018) that compared two methods of measuring nutrient and metabolic fluxes on restored oyster reefs: incubations including intact segments of oyster reef and incubations containing oyster clumps without underlying sediments.
DOI: 10.26008/1912/bco-dmo.870390.1
title: A pCO2 time series from a SAMI-CO2 instrument during an inter-comparison of autonomous in situ instruments for ocean CO2 measurements under laboratory-controlled conditions at Scripps Institution of Oceanography in 2016

description: This dataset contains a pCO2 time series from a SAMI-CO2 instrument with a frequency of 15 min. These data were part of an inter-comparison of autonomous in situ instruments for ocean CO2 measurements under laboratory-controlled conditions at Scripps Institution of Oceanography in August of 2016. These data were published in Shangguan et al. (2022).
DOI: 10.26008/1912/bco-dmo.870412.1
title: Temperature and salinity by a MicroCAT CTD during an inter-comparison of autonomous in situ instruments for ocean CO2 measurements under laboratory-controlled conditions at Scripps Institution of Oceanography in 2016

description: This dataset contains temperature and salinity by a MicroCAT CTD at a 15-min frequency.  These data were part of an inter-comparison of autonomous in situ instruments for ocean CO2 measurements under laboratory-controlled conditions at Scripps Institution of Oceanography in August of 2016. These data were published in Shangguan et al. (2022).
DOI: 10.26008/1912/bco-dmo.870352.1
title: Total alkalinity from SAMI-alks during an inter-comparison of autonomous in situ instruments for ocean CO2 measurements under laboratory-controlled conditions at Scripps Institution of Oceanography in 2016

description: This dataset contains a total alkalinity (TA) time-series measured by three identically designed SAMI-alks (Submersible Autonomous Moored Instrument for Alkalinity). Data was recorded at 1-hour intervals. 
 These data were part of an inter-comparison of autonomous in situ instruments for ocean CO2 measurements under laboratory-controlled conditions at Scripps Institution of Oceanography in August of 2016. These data were published in Shangguan et al. (2022).
DOI: 10.26008/1912/bco-dmo.870379.1
title: pH time-series from SAMI-pH and SeapHOx instruments during an inter-comparison of autonomous in situ instruments for ocean CO2 measurements under laboratory-controlled conditions at Scripps Institution of Oceanography in 2016

description: This dataset contains pH time series simultaneously recorded by 4 pH sensors. Two of them were SAMI-pH, and the other two were SeapHOx. Data interval was 15 min. These data were part of an inter-comparison of autonomous in situ instruments for ocean CO2 measurements under laboratory-controlled conditions at Scripps Institution of Oceanography in August of 2016. These data were published in Shangguan et al. (2022).
DOI: 10.26008/1912/bco-dmo.870401.1
title: A pCO2 time series from a SuperCO2 benchtop instrument during an inter-comparison of autonomous in situ instruments for ocean CO2 measurements under laboratory-controlled conditions at Scripps Institution of Oceanography in 2016

description: This dataset contains pCO2 time series recorded by a benchtop instrumentation, SuperCO2. Data was averaged to a 15-min interval. These data were part of an inter-comparison of autonomous in situ instruments for ocean CO2 measurements under laboratory-controlled conditions at Scripps Institution of Oceanography in August of 2016. These data were published in Shangguan et al. (2022).
DOI: 10.26008/1912/bco-dmo.809808.1
title: Distance-weighted data flow averages interpolated over 24-hours for the York River estuary in 2018 and 2019

description: Dataflow data collected seasonally during dawn, dusk, and 2nd dawn cruises down the York River estuary. Data distance-weighted for each of 5 boxes, and interpolated over 24-hours.
DOI: 10.26008/1912/bco-dmo.870368.1
title: Bottle sample TA, pH, and DIC collected during an inter-comparison of autonomous in situ instruments for ocean CO2 measurements under laboratory-controlled conditions at Scripps Institution of Oceanography in 2016

description: This dataset contains total alkalinity (TA), pH, and dissolved inorganic carbon (DIC) from bottle samples collected 3 to 4 times a day. These data were part of an inter-comparison of autonomous in situ instruments for ocean CO2 measurements under laboratory-controlled conditions at Scripps Institution of Oceanography in August of 2016. These data were published in Shangguan et al. (2022).
DOI: 10.26008/1912/bco-dmo.810274.1
title: Distance-weighted data flow averages for the York River estuary in 2018 and 2019

description: Distance-weighted data flow averages for the York River estuary in 2018 and 2019
DOI: 10.26008/1912/bco-dmo.870161.1
title: Cell volumes were calculated for 8 species of marine cryptophytes grown under full-spectrum, blue, green, or red light during laboratory-based growth experiments in 2018

description: Cell volumes were calculated for 8 species of marine cryptophytes grown under full-spectrum, blue, green, or red light during laboratory-based growth experiments conducted in February of 2018.
DOI: 10.26008/1912/bco-dmo.867442.1
title: Antarctic Peninsula ROMS model Palmer Deep area drifter data

description: Antarctic Peninsula ROMS model Palmer Deep area drifter data
DOI: 10.26008/1912/bco-dmo.869683.1
title: Dissolved trace metal (Mn, Fe, Co, Ni, Cu, Zn, Cd, Pb) concentration data from surface (towfish) samples collected during 2018 EXPORTS North Pacific cruise to the subarctic North Pacific near Ocean Station PAPA (Station P) on R/V Roger Revelle RR1813.

description: Concentrations of dissolved (&lt;0.2 µm) manganese (Mn), iron (Fe), cobalt (Co), nickel (Ni), copper (Cu), zinc (Zn), cadmium (Cd), lead (Pb) in surface (~2 m) samples collected between 15 August 2018 and 6 September 2018 during EXports Processes in the Oceans from RemoTe Sensing (EXPORTS) cruise aboard RV Roger Revelle RR1813 at Ocean Station PAPA (Station P).
DOI: 10.26008/1912/bco-dmo.869963.1
title: Water column nitrate plus nitrite isotope measurements from seawater collected November 2019 aboard R/V L’Atalante in the Western Tropical South Pacific.

description: Here we present nitrate plus nitrite isotopic data from the TONGA 2019 research cruise to the Western Tropical South Pacific. These data were collected along a transect focusing on the impacts on biological productivity and the biological carbon pump from shallow hydrothermal sources of trace elements. Notably, these data show that the subsurface nitrate plus nitrite isotopes were low, 2 to 3 per mil, in the vicinity of the hydrothermal vents. Subsurface nitrate plus nitrite isotopes were higher, 4 to 7 per mil, at stations further from the vents.
DOI: 10.26008/1912/bco-dmo.868696.1
title: Coccolithophore survival in darkness from batch growth experiments (Cocco-Mix project)

description: Results for batch growth experiments that lasted for 30 days on two species, Cruciplacolithus neohelis (McIntyre & Bé) Reinhardt strain CCMP298 and Chrysotila carterae (Braarud & Fagerland) Andersen, Kim, Tittley & Yoon (NCMA lists the strain as Pleurochrysis carterae) strain CCMP3337, grown in darkness with the addition of acetate, mannitol, and glycerol in final concentrations of 10, 30, 100, 300 and 1000 µmol l−1. We performed these experiments to determine whether coccolithophores (CCMP298 and CCMP3337) can sustain themselves in darkness by using organic compounds as energy and/or carbon sources.
DOI: 10.26008/1912/bco-dmo.869708.1
title: Salinity, radium/thorium radionuclide, and nitrogen oxide concentration measurements from surface and porewater samples collected in coastal South Carolina from 2017 to 2019

description: Surface and porewater salinity, radium/thorium radionuclide measurements, and nitrogen oxide concentration measurements.
DOI: 10.26008/1912/bco-dmo.809945.3
title: Winter survey data from Lake Erie from 2018-2020

description: Winter survey data from Lake Erie collected on USCGC NEAH BAY, CCGS Limnos and M/V Orange Apex during 2018, 2019 and 2020.
DOI: 10.26008/1912/bco-dmo.869389.1
title: Geochemical data of ground ice and pore water in frozen sediments from the Barrow Permafrost Tunnel in Utqiaġvik, Alaska in 2017 and 2018

description: This dataset contains geochemical data of ground ice and pore water in frozen sediments from the Barrow Permafrost Tunnel in Utqiaġvik, Alaska. Data were collected in May 2017 and May 2018.
DOI: 10.26008/1912/bco-dmo.869472.1
title: Geochemical data of permafrost brines from the Barrow Permafrost Tunnel in Utqiaġvik, Alaska

description: This dataset contains geochemical data of permafrost brines from the Barrow Permafrost Tunnel in Utqiaġvik, Alaska sampled from 2006 to 2018.
DOI: 10.26008/1912/bco-dmo.849259.1
title: Physiological parameters of three corals species collected from Hawaii and exposed to four treatment conditions for 22-months as part of a mesocosm experiment

description: This dataset includes physiological parameters of three corals species collected from six locations around O'ahu, Hawaii, which were exposed to four treatment conditions for 22-months: ambient temperature and ambient pCO2, elevated temperature, elevated pCO2, or elevated temperature and elevated pCO2.
DOI: 10.26008/1912/bco-dmo.854424.1
title: Sample metadata for MOCNESS tows conducted on R/V Kilo Moana cruise KM1910 at Station ALOHA during June 2019

description: Metadata for samples collected by 1m2 MOCNESS on the Chief Scientist Training Cruise at station ALOHA in June 2019.
DOI: 10.26008/1912/bco-dmo.825252.1
title: Grain size and radiometric data from multi-core sediments collected Fall 2017 from the R/V Acadiana in the northwestern Gulf of Mexico to assess Hurricane Harvey impacts

description: Sediments of the northwestern Gulf of Mexico were analyzed for grain size and radiometric data (210-Pb, 234-Th, and 7-Be) to assess Hurricane Harvey impacts.
DOI: 10.26008/1912/bco-dmo.855139.2
title: DOP concentration observations from the global ocean between 1990 and 2021 (DOP N2 fixation and export production project)

description: DOP (Dissolved Organic Phosphorus) concentration observations in the global ocean between 1990 and 2021 over multiple deployments. DOP concentrations in this study were calculated as the difference between TDP concentrations and SRP concentrations of samples. For DOP concentrations reported here, TDP concentrations were measured by the ash/hydrolysis method based on Monaghan and Ruttenberg, 1999.
DOI: 10.26008/1912/bco-dmo.869648.1
title: Density of sea fans from surveys in St. John, US Virgin Islands in August of 2020

description: Data describe the density of Gorgonia ventalina recorded in August 2020 in 1 x 1 m quadrats in St. John, US Virgin Islands.

These data support the publication Edmunds & Brown (2021) in the Bulletin of Marine Science doi.org/10.5343/bms.2020.0061.
DOI: 10.26008/1912/bco-dmo.844431.1
title: An investigation of Symbiodiniaceae communities via ITS-2 rDNA amplicon sequencing in Acropora millepora corals from the Great Barrier Reef following exposure to stressors in October 2014

description: Symbiodiniaceae communities were investigated at three locations on the Great Barrier Reef in October 2014.  Acropora millepora samples from Davies Reef lagoon (18°30′3.96′′S, 147°22′48′′E), Rib Reef (18°28′53.4′′S, 146°52′24.96′′E), and Pandora Island (18°48′45′′S, 146°25′59.16′′E),  were exposed to various stressors including pCO2, heat, bacteria, all of these, or none of these (control). This dataset lists accessions and collection information for ITS-2 rDNA amplicon data that are available at the National Center for Biotechnology Information (NCBI) under BioProject PRJNA596498.
DOI: 10.26008/1912/bco-dmo.868879.1
title: Cast data from cruise R/V Hugh R. Sharp HRS2110 in the Chesapeake Bay from August 2021 (NO2Ox_OMZs project)

description: Cast data from cruise R/V Hugh R. Sharp HRS2110 in the Chesapeake Bay from August 2021 associated with the Nitrate Oxidation in Oxygen Minimum Zones project.
DOI: 10.26008/1912/bco-dmo.869656.1
title: Height of sea fans from surveys in St. John, US Virgin Islands in August of 2020

description: Data describe the height of Gorgonia ventalina recorded in August 2020 in 1 x 1 m quadrats in St. John, US Virgin Islands.

These data support the publication Edmunds & Brown (2021) in the Bulletin of Marine Science doi.org/10.5343/bms.2020.0061.