cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.yejjyy
title: Occurrence Download

description: A dataset listing the 3094 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is one of (Finland, Sweden, Norway, Denmark, Iceland, Greenland, Faroe Islands)",
 "OccurrenceStatus is Present",
 "TaxonKey is Agaricomycetes",
 "Year 2022-2023"
 ]
}

 The dataset's 3094 records were derived from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022042-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gq6gg4
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vauquelinia australis",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 121 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000064-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dfbhrp
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Locality is 青山湖",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 59 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000065-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6vfe9f
title: Occurrence Download

description: A dataset containing 1971 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hoplosternum littorale"
 ]
}

 The dataset includes 1971 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000067-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5319sg5d
title: MassIVE MSV000100638 - Allele-Specific Regulation of Brain Aging: APOE2 Resists Senescence and Inflammatory Remodeling in Human Neural Organoids
title: Apolipoprotein E (APOE) is a major genetic determinant of late-onset Alzheimer's disease (AD) and a modulator of neural aging. Among the three human alleles APOE2, APOE3, and APOE4, APOE4 increases risk for neurodegeneration, whereas APOE2 confers protection, but the molecular basis for this resilience remains undefined. We investigated isogenic human induced pluripotent stem cell (hiPSC)-derived cerebral organoids with data-independent acquisition mass spectrometry (DIA-MS) to map how APOE genotypes define the proteome and the senescence-associated secretory phenotype (SASP). We used irradiation to induce cellular senescence, and we quantified over 6,500 proteins and 300 phosphorylation sites across intracellular and secreted fractions. APOE2 organoids displayed an attenuated senescence signatures, preserved nuclear and extracellular matrix organization, and reduced phosphorylation of microtubule-associated proteins, while APOE4 organoids exhibited nuclear proteome depletion, MAP1B and TAU hyperphosphorylation, and an inflammatory SASP enriched in complement and S100 family members. Comparative analyses revealed an APOE2-specific secretome enriched in antioxidant enzymes and chaperones that may contribute to its longevity-associated phenotype. Together, these findings define APOE2 as an attenuator of senescence and identified allele-specific secretory networks that modulate aging resilience in a human brain organoid model.
DOI: 10.15468/dl.habjfu
title: Occurrence Download

description: A dataset containing 375 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vauquelinia californica",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 375 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000068-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5285/776f99f4-1506-4f7f-920f-8318561d4085
title: Headwater stream quality metrics from the Environment and Rural Affairs Monitoring & Modelling Programme, Wales, 2021-2023

description: This dataset consists of headwater quality data for sites across Wales between 2021 and 2023), collected as part of the Environment and Rural Affairs Monitoring and Modelling Programme (ERAMMP) National Field Survey. Data include water chemistry and ecological quality metrics, River Habitat Survey data (including information on substrates, flow types, aquatic vegetation, channel and bank materials, modifications and natural features, riparian land use, artificial features, spot check records, tree cover and associated features and Habitat Modification and Habitat Quality indices), macro-invertebrate taxonomic and abundance data, diatom taxonomic and abundance data, headwater quality indices derived from both the invertebrate and diatom communities and associated environmental data.
Headwater streams were surveyed within a set of 101 x 1km squares across Wales, collected as part of the Environment and Rural Affairs Monitoring and Modelling Programme (ERAMMP) National Field Survey. ERAMMP follows an earlier monitoring programme, the Glastir Monitoring and Evaluation Programme (GMEP), which was set up by the Welsh Government in 2013 to monitor the effects of the Glastir agri-environment scheme on the environment and ran from 2013 to 2016. The field survey element for both GMEP and ERAMMP was based on a stratified random sampling design of 300 x 1km square sites across Wales (225 of which were resurveyed for ERAMMP in 2021-23, though not all squares contained headwater streams). It was managed by the UK Centre for Ecology & Hydrology.
description: The data were recorded using electronic data capture devices in the summers of 2021-2023 by professional surveyors. Data were recorded from up to 225 x 1km squares sited across Wales, selected by random stratified sample (not all squares surveyed in this program contained headwater streams). The survey was managed by the UK Centre for Ecology & Hydrology. Standardised methodologies were applied throughout. 
To ensure confidentiality of the data with respect to land owners and managers, the locations of 1km squares and survey sites were converted to the centres of the containing 10 km Ordnance Survey grid squares.
DOI: 10.13140/rg.2.2.34160.52483
title: Da universidade às comunidades: extensão em horticultura urbana na UFRGS
DOI: 10.5281/zenodo.18415002
title: Supplementary Material - Random restarts in PSO - Does it even matter?

description: This repository contains the code for the experiments and evaluation, as well as all produced figures for the work "Random restarts in PSO - Does it even matter?".
DOI: 10.5281/zenodo.18415001
title: Supplementary Material - Random restarts in PSO - Does it even matter?

description: This repository contains the code for the experiments and evaluation, as well as all produced figures for the work "Random restarts in PSO - Does it even matter?".
DOI: 10.5281/zenodo.18415890
title: Dataset for: Tracing plant invasions in freshwater habitats: spatial and temporal insights from herbarium data
DOI: 10.5281/zenodo.18047113
title: Dataset for: Tracing plant invasions in freshwater habitats: spatial and temporal insights from herbarium data
DOI: 10.15480/882.15763
title: Optical Profilometer Dataset for Diced Surfaces Obtained with Wafer Dicing Machine at Varying Feed Velocities

description: Fused silica wafers (1mm thickness) were diced with a wafer dicing machine (Disco DAD3350) at different feed velocities to analyze the impact on the surface roughness. The surface roughness was measured with an optical profilometer (Keyence VK-X3000) in white light interferometer mode. Raw data from the interferometer measurements and a README file are included in this dataset.
DOI: 10.15468/dl.dvmt7y
title: Occurrence Download

description: A dataset containing 357 records in GBIF matching the query:
SELECT
 '588' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= 61.2993700571118
 AND decimalLatitude &lt;= 66.79314043790278
 AND decimalLongitude &gt;= 79.10424340471731
 AND decimalLongitude &lt;= 98.78043152595286
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 357 records were derived from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000054-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hfrwy2
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-18.64723 32.74421,17.64723 32.74421,17.64723 47.25579,-18.64723 47.25579,-18.64723 32.74421))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Porcellio succinctus"
 ]
}

 The dataset includes 19 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000069-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/95qc7k
title: On the sympatric spiders from the Baja California Peninsula: Descriptions of the males of Syspira longipes Simon and S. tigrina Simon (Araneae: Miturgidae), with new synonyms

description: This dataset contains the digitized treatments in Plazi based on the original journal article Valdez-Mondragón, Alejandro, Jiménez, Maria Luisa, Palacios-Cardiel, Carlos (2025): On the sympatric spiders from the Baja California Peninsula: Descriptions of the males of Syspira longipes Simon and S. tigrina Simon (Araneae: Miturgidae), with new synonyms. Zootaxa 5722 (3): 301-325, DOI: 10.11646/zootaxa.5722.3.1, URL: https://doi.org/10.11646/zootaxa.5722.3.1AbstractThe spider species Syspira longipes Simon, 1895 and Syspira tigrina Simon, 1895 (family Miturgidae) from the Baja California Peninsula, Mexico have their males described for the first time, and the females redescribed. The descriptions are based on morphological and ultra morphological data under Scanning electron microscopy (SEM). Additionally, Syspira analytica Chamberlin, 1924 and Syspira synthetica Chamberlin, 1924 are formally synonymized with S. tigrina. Syspira eclectica Chamberlin, 1924 is also synonymized with S. longipes.
DOI: 10.25625/5vepgm
title: Außer - Vetter

description: Datensatz, Items und Auswertung zur Masterarbeit von Nicolas Vetter
DOI: 10.15468/dl.9va238
title: Occurrence Download

description: A dataset containing 279 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Waldsteinia ternata",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 279 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000070-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5z892v1w
title: MassIVE MSV000100639 - Investigating the role of a ribosome biogenesis factor in a DBA like congenital bone marrow failure syndrome
title: Proteomics data from MAC-tag affinity purification pull-downs were generated to map the GRWD1 protein interaction network.
DOI: 10.15468/dl.pkge4d
title: Occurrence Download

description: A dataset containing 2212 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lethe confusa"
 ]
}

 The dataset includes 2212 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000073-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.20536977.v1
title: Dynamic Principal Component Analysis in High Dimensions

description: Principal component analysis is a versatile tool to reduce dimensionality which has wide applications in statistics and machine learning. It is particularly useful for modeling data in high-dimensional scenarios where the number of variables <i>p</i> is comparable to, or much larger than the sample size <i>n</i>. Despite an extensive literature on this topic, researchers have focused on modeling static principal eigenvectors, which are not suitable for stochastic processes that are dynamic in nature. To characterize the change in the entire course of high-dimensional data collection, we propose a unified framework to directly estimate dynamic eigenvectors of covariance matrices. Specifically, we formulate an optimization problem by combining the local linear smoothing and regularization penalty together with the orthogonality constraint, which can be effectively solved by manifold optimization algorithms. We show that our method is suitable for high-dimensional data observed under both common and irregular designs, and theoretical properties of the estimators are investigated under lq(0≤q≤1) sparsity. Extensive experiments demonstrate the effectiveness of the proposed method in both simulated and real data examples.
DOI: 10.6084/m9.figshare.20681212.v1
title: journal of psychology@*@

description: Participants were chosen from four colleges in main land of China using the random sampling method in the year of 2022.
DOI: 10.6084/m9.figshare.21214205.v1
title: Ab initio B3LYP/6-31+G* charges, dipole and energies for CH3SH quantum center (protonated and deprotonated)

description: Gaussian output files
DOI: 10.6084/m9.figshare.6945824.v4
title: Task-evoked pupil responses reflect internal belief states: Behavior & pupil data

description: Behavioral data and pupil responses corresponding to the paper:<br><br>Colizoli, O., de Gee, J. W., Urai, A. E. & Donner, T. H. <b>Task-evoked pupil responses reflect internal belief states</b>. <i>Scientific Reports</i> 8, 13702 (2018).<br>Corresponding code can be found here: https://github.com/colizoli/pupil_belief_states
DOI: 10.6084/m9.figshare.19100876.v1
title: [dataset] Mizuno et al 2022

description: Data of submitted paper about a special inhibitor of ferroptosis and neurological injury.<br>
DOI: 10.6084/m9.figshare.25206887.v4
title: Assessing the risk of climate maladaptation for Canadian polar bears

description: The Arctic is warming four times faster than the rest of the world, threatening the persistence of many Arctic species. It is uncertain if Arctic wildlife will have sufficient time to adapt to such rapidly warming environments. We used genetic forecasting to measure the risk of maladaptation to warming temperatures and sea ice loss in polar bears (<i>Ursus maritimus</i>) sampled across the Canadian Arctic. We found evidence for local adaptation to sea ice conditions and temperature. Forecasting of genome-environment mismatches for predicted climate scenarios suggested that polar bears in the Canadian high Arctic had the greatest risk of becoming maladapted to climate warming<i>.</i> While Canadian high Arctic bears may be the most likely to become maladapted, all polar bears face potentially negative outcomes to climate change. Given the importance of the sea ice habitat to polar bears, we expect that maladaptation to future warming is already widespread across Canada.
DOI: 10.6084/m9.figshare.27604449.v1
title: Complete dataset

description: This file includes the raw data used for data analysis. The data was analyzed using SmartPLS.
DOI: 10.6084/m9.figshare.28333742.v2
title: Supplementary Material for: The challenge of calculating EUSOMA quality indicators with administrative data – A pilot study in Belgium

description: Introduction: The study aimed to assess the feasibility of calculating the European Society of Breast Cancer Specialists (EUSOMA) quality indicators (QIs) using Belgian cancer registry data coupled to administrative health data, and to provide national results.
Methods: Women diagnosed with ductal carcinoma in situ (DCIS) or invasive breast cancer (IBC) in 2014-2018 were selected from the cancer registry. Fourteen EUSOMA QIs were chosen to assess the quality of care. 
Results: Overall, 46,035 patients with IBC and 3,973 patients with DCIS were included. Most QIs had to be rephrased so that they could be calculated with the available data. None of the selected QIs on systemic treatment could be calculated due to a lack of reliable receptor status information. For some QIs there is ample room for improvement in Belgian clinical practice: cTNM stage reporting, multidisciplinary team meetings, sentinel lymph-node biopsy only in IBC with clinically negative lymph nodes. The result was 1-5% lower than the target for mammography and breast ultrasound, pTNM reporting, start of treatment, single breast surgery in DCIS, and no axillary clearance in DCIS. For histological or cytological assessment, receptor status assessment, start of radiotherapy, and single breast surgery in IBC, the results were at or above the target. 
Conclusion: Several EUSOMA QIs can be calculated with routinely collected data, while for several important aspects of care additional data collection is indicated so that its quality can be assessed. The validity of the obtained results depends on the reporting accuracy.
DOI: 10.6084/m9.figshare.29107070.v1
title: <b>Extreme drought decreases the stability of above- but not belowground productivity across Eurasian steppes</b>

description: Data were collected annually from 2016 to 2018 across six representative grassland sites in Northern China as part of the Extreme Drought in Grasslands Experiment (EDGE). The sites spanned a range of grassland types and climatic conditions in Northern China, selected to capture regional variability in ecosystem responses to extreme drought. At each site, ANPP, BNPP, and community variables were measured in experimental plots subjected to extreme drought treatments and ambient controls.
DOI: 10.23645/epacomptox.5588635.v8
title: Chemistry Dashboard Data: Abstract Sifter Files

description: Abstract Sifter is an Excel-based tool that facilitates literature searching in PubMed. The tool uses a “sifter” functionality for relevance ranking, allowing users to find articles of interest quickly. Abstract Sifter lets researchers triage results and keep track of articles of interest. The tool also gives researchers a view of the literature landscape for a set of entities such as chemicals or genes and makes it easy to dive deeper into areas of interest.
DOI: 10.6084/m9.figshare.19928901.v1
title: Growth and plant mass of radish fertirrigated with different doses nitrogen

description: ABSTRACT The objective of the present study was to evaluate the effect of nitrogen doses applied via fertigation and associated with different types of crop establishment fertilization on growth and biomass of radish. The experiment was conducted in a greenhouse of the Academic Unit of Agricultural Engineering, Federal University of Campina Grande, from April to May 2014. Treatments consisted of five doses of nitrogen fertilizer applied by fertigation (0, 0.7, 1.4, 2.1 and 2.8g per pot) and three types of crop establishment fertilization (humus 2:2; NPK and control), arranged in a 5 x 3 factor design with four repetitions. The 15 treatments were arranged in 60 plots. The nitrogen source used in the study was urea, divided in three applications: the first application was carried out eight days after transplanting, the second, on day 15, and the third, on day 22. The crop establishment fertilization significantly influenced the growth variables and plant mass of the radish on day 35 after transplanting. The highest values of the variables (number of leaves, plant height, bulb diameter, leaf area, fresh mass of the aerial part, dry mass of the aerial part and root/aerial part were observed in the treatment with humus on day 35 after transplanting. The dose of 2.8g nitrogen per pot corresponding to 6.22g of urea per plant provided the highest yield for the variable number of leafs, leaf area and root length on day 35 after transplanting.
DOI: 10.6084/m9.figshare.23291672.v1
title: DATA.xls <strong>Investigating the vegetation's temporal-spatial response to meteorological and hydrogeological drought in drylands"</strong>

description: These data is belong to article entitled " <strong>Investigating the vegetation's temporal-spatial response to meteorological and hydrogeological drought in drylands" in </strong>Geoscience Data Journal. <br>
DOI: 10.6084/m9.figshare.811811.v1
title: Data file (subject characteristics, volume and shape)

description: In this data file the columns from left to right represent Diagnosis (dx=diagnosis, T = TS or chronic tic disorder, C = Control), Sex (m = male, f = female), Age at scan (in years), and handedness (L = Left, R = Right, A = Ambidextrous). Then the shape principal component (eigenvector) values are represented as demonstrated by the following example: “NaLpc01” = nucleus accumbens (Na) Left (L) principal component (pc) 01. (“Na” = nucleus accumbens, “Cd” = caudate, “Pl” = globus pallidus, “Pu” = putamen, “Th” = thalamus). Next the volumes are listed using similar notation, e.g. “volCdL” = volume in mm3 (vol) Caudate (Cd) Left (L). Finally, Freesurfer analysis values are listed using their standard notation, which can be found in the table at: http://ftp.nmr.mgh.harvard.edu/fswiki/FsTutorial/AnatomicalROI#aseg.stats - See more at: http://62.231.116.94/black/#sthash.OO28vyHo.dpuf
DOI: 10.17632/jpy5cmn537
title: Data: Probabilistic Cellular Automata Modelling and Simulation of Land Use Changes in Okomu National Park

description: This study monitors and models spatio–temporal land use changes in Okomu National Park over two decades (2000 – 2020) with the aim of projecting forest cover changes for the near future. A probabilistic cellular automata (CA) model was created and used to simulate land use changes with the aim of prediction. Landsat 7 ETM+ satellite images for years 2000, 2005, 2010, 2015, and 2020 were classified into Forest and Non–Forest using maximum likelihood supervised classification algorithm. The overall classification accuracy for the years under study was 98.1838%, 97.5169%, 96.3325%, 91.6647%, and 94.6124% with overall kappa coefficients of 0.9654, 0.9557, 0.9524, 0.8563, and 0.9094 respectively. State transition probabilities for 2000–2005, 2005–2010, 2010–2015, and 2015–2020 were calculated from the classified images. A probabilistic cellular automata model using Moore’s neighborhood with a Von Neumann extension was used to simulate land use changes for years 2005, 2010, 2015 and 2020 with year 2000 as the base year. Simulation accuracy was 77.46% for year 2005, 74.1% for year 2010, 70.98% for year 2015, and 78.27% for year 2020. Projections was made for years 2025 and 2030 and it shows a 27.41% decline from the base year by 2025, and a 29.90% decline by 2030. Keywords: Cellular Automata, Markov Chain, Simulation, Supervised Classification
DOI: 10.6084/m9.figshare.14131296.v1
title: Additional file 4 of Genome-Wide Association Study Dissects Resistance Loci against Bacterial Blight in a Diverse Rice Panel from the 3000 Rice Genomes Project

description: Additional file 4: Table S4. Haplotypes of one candidate gene of xa44(t), Os11g0690066