cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14385297.v1
title: Additional file 2 of Implementing care coordination in a large dental care organization in the United States by upskilling front office personnel

description: Additional file 2. Post-survey results (means) by demographics and role. Contains a table of each post-survey item with mean responses stratified by job type (dental care advocates, managers), age group, race/ethnicity, and gender. Table legend: † only asked on follow-up (post) survey; ‡ reverse coded; DCA = dental care advocate; AI/AN = American Indian/Alaska Native; ND = insufficient data to report; Individual survey questions were not mandatory, so the reported n varies by item response.
DOI: 10.6084/m9.figshare.14385312
title: Additional file 2 of Molecular surveillance of drug resistance: Plasmodium falciparum artemisinin resistance single nucleotide polymorphisms in Kelch protein propeller (K13) domain from Southern Pakistan

description: Additional file 2: Genebank submission record.
DOI: 10.6084/m9.figshare.14385312.v1
title: Additional file 2 of Molecular surveillance of drug resistance: Plasmodium falciparum artemisinin resistance single nucleotide polymorphisms in Kelch protein propeller (K13) domain from Southern Pakistan

description: Additional file 2: Genebank submission record.
DOI: 10.6084/m9.figshare.14385343
title: Additional file 2 of Microbiota-associated risk factors for asymptomatic gut colonisation with multi-drug-resistant organisms in a Dutch nursing home

description: Additional file 2: Table S1. Results of DESeq2 analysis on MDRO-positive samples versus MDRO-negative samples per time point. Negative log2FoldChanges in the table indicate that a genus is more abundant in non-MDRO-colonised samples.
DOI: 10.6084/m9.figshare.14385343.v1
title: Additional file 2 of Microbiota-associated risk factors for asymptomatic gut colonisation with multi-drug-resistant organisms in a Dutch nursing home

description: Additional file 2: Table S1. Results of DESeq2 analysis on MDRO-positive samples versus MDRO-negative samples per time point. Negative log2FoldChanges in the table indicate that a genus is more abundant in non-MDRO-colonised samples.
DOI: 10.6084/m9.figshare.14385346.v1
title: Additional file 3 of Microbiota-associated risk factors for asymptomatic gut colonisation with multi-drug-resistant organisms in a Dutch nursing home

description: Additional file 3: Table S2. Retrieved genome length for B. longum in bp from resident samples, and genome length of several reference sequences of B. longum. For L001, L006 and L028_2 (nearly) full B. longum genomes were obtained (length &gt; 2 million bp).
DOI: 10.6084/m9.figshare.14385346
title: Additional file 3 of Microbiota-associated risk factors for asymptomatic gut colonisation with multi-drug-resistant organisms in a Dutch nursing home

description: Additional file 3: Table S2. Retrieved genome length for B. longum in bp from resident samples, and genome length of several reference sequences of B. longum. For L001, L006 and L028_2 (nearly) full B. longum genomes were obtained (length &gt; 2 million bp).
DOI: 10.6084/m9.figshare.14385354
title: Additional file 10 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 10: Table S8. Percentage of homology shared by 272 SSPs of R. solani B2 with R. solani AG1-IA (YN7, ADB, RNR), AG1-IB, AG2-2IIIB, AG3, and AG8.
DOI: 10.6084/m9.figshare.14385360
title: Additional file 12 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 12: Table S10. Analysis of chi-square tests of selected CAZymes and secondary metabolites.
DOI: 10.6084/m9.figshare.14385363
title: Additional file 13 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 13: Table S11. Chi-square analysis of the number of predicted lignocellulose, pectin, and monocot cell wall degrading genes observed across the 11 fungal groupings based on lifestyle and host of genomes used in this study (p
DOI: 10.6084/m9.figshare.14385354.v1
title: Additional file 10 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 10: Table S8. Percentage of homology shared by 272 SSPs of R. solani B2 with R. solani AG1-IA (YN7, ADB, RNR), AG1-IB, AG2-2IIIB, AG3, and AG8.
DOI: 10.6084/m9.figshare.14385363.v1
title: Additional file 13 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 13: Table S11. Chi-square analysis of the number of predicted lignocellulose, pectin, and monocot cell wall degrading genes observed across the 11 fungal groupings based on lifestyle and host of genomes used in this study (p
DOI: 10.6084/m9.figshare.14385375
title: Additional file 2 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 2: Table S1. List of genomes of fungal species/genomes utilized in this study for comparative genome analyses (excluding the R. solani AG1-IA B2, ADB, WGL and YN-7).
DOI: 10.6084/m9.figshare.14385360.v1
title: Additional file 12 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 12: Table S10. Analysis of chi-square tests of selected CAZymes and secondary metabolites.
DOI: 10.6084/m9.figshare.14385375.v1
title: Additional file 2 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 2: Table S1. List of genomes of fungal species/genomes utilized in this study for comparative genome analyses (excluding the R. solani AG1-IA B2, ADB, WGL and YN-7).
DOI: 10.6084/m9.figshare.14385384
title: Additional file 5 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 5: Table S3. Absolute number and proportion of orthologs upon pairwise comparisons of 27 fungal genomes.
DOI: 10.6084/m9.figshare.14385384.v1
title: Additional file 5 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 5: Table S3. Absolute number and proportion of orthologs upon pairwise comparisons of 27 fungal genomes.
DOI: 10.6084/m9.figshare.14385390
title: Additional file 7 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 7: Table S5. Repetitive element profiles for R. solani AG1-IA, AG1-IB, AG2-2IIIB, AG3, and AG8 isolates.
DOI: 10.6084/m9.figshare.14385396
title: Additional file 9 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 9: Table S7. List of conserved and unique SSPs found in all R. solani genomes used in this study.
DOI: 10.6084/m9.figshare.14385396.v1
title: Additional file 9 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 9: Table S7. List of conserved and unique SSPs found in all R. solani genomes used in this study.
DOI: 10.6084/m9.figshare.14385390.v1
title: Additional file 7 of Comparative genome analyses of four rice-infecting Rhizoctonia solani isolates reveal extensive enrichment of homogalacturonan modification genes

description: Additional file 7: Table S5. Repetitive element profiles for R. solani AG1-IA, AG1-IB, AG2-2IIIB, AG3, and AG8 isolates.
DOI: 10.6084/m9.figshare.14385397
title: Additional file 1 of Outcomes of the rotating hinge knee in revision total knee arthroplasty with a median follow-up of 6.2 years

description: Additional file 1. Postoperative revision surgeries.
DOI: 10.6084/m9.figshare.14385397.v1
title: Additional file 1 of Outcomes of the rotating hinge knee in revision total knee arthroplasty with a median follow-up of 6.2 years

description: Additional file 1. Postoperative revision surgeries.
DOI: 10.6084/m9.figshare.14385402
title: Additional file 2 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 2: Supplementary file 2. Top 100 most abundant transcripts for each life stage of Dermanyssus gallinae (egg, larvae, protonymph, deutonymph, adult female and adult male) based upon the transcript per million (TPM) values. Filtered transcripts: Top 100 most abundant transcripts for each life stage that were manually filtered to removed ribosomal RNA subunits and transcripts with little or no associated annotation. Unfiltered transcripts: Top 100 most abundant transcripts for each life stage with no filtering.
DOI: 10.6084/m9.figshare.14385399
title: Additional file 1 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 1: Supplementary file 1. Summary of transcripts in the Markov Cluster Algorithm (MCL) network clusters and their supercluster identity designation corresponding to the 6 life stages (egg, larvae, protonymph, deutonymph, adult female and adult male) of Dermanyssus gallinae.
DOI: 10.6084/m9.figshare.14385399.v1
title: Additional file 1 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 1: Supplementary file 1. Summary of transcripts in the Markov Cluster Algorithm (MCL) network clusters and their supercluster identity designation corresponding to the 6 life stages (egg, larvae, protonymph, deutonymph, adult female and adult male) of Dermanyssus gallinae.
DOI: 10.6084/m9.figshare.14385405
title: Additional file 3 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 3: Supplementary file 3. Tabular output of a 6-way Venn/Euler diagram. Constructed from the top 100 most abundant transcripts from each life stage (that were pre-filtered to remove ribosomal proteins and those with no associated annotation). The transcripts localising to the Venn clades of the 6 individual life stages and the 39 multi-life stage clades of Dermanysssus gallinae are listed. Transcripts were organized in broad categories termed ‘Gene function category’ and ‘Inferred function’ based on a comprehensive assessment of inferred functions from Blastp homology, and associated GO annotations and InterPro terms.
DOI: 10.6084/m9.figshare.14385405.v1
title: Additional file 3 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 3: Supplementary file 3. Tabular output of a 6-way Venn/Euler diagram. Constructed from the top 100 most abundant transcripts from each life stage (that were pre-filtered to remove ribosomal proteins and those with no associated annotation). The transcripts localising to the Venn clades of the 6 individual life stages and the 39 multi-life stage clades of Dermanysssus gallinae are listed. Transcripts were organized in broad categories termed ‘Gene function category’ and ‘Inferred function’ based on a comprehensive assessment of inferred functions from Blastp homology, and associated GO annotations and InterPro terms.
DOI: 10.6084/m9.figshare.14385408
title: Additional file 4 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 4: Supplementary file 4. Summary of inferred transcript functions in selected Venn clades, representing the individual life stages and multiple stage comprising of the ‘blood feeding’ stages of Dermanyssus gallinae. The transcripts localising to the individual life stages (egg, larvae, protonymph, deutonymph, adult female and adult male) and multiple blood feeding life stages (protonymph, deutonymph, adult female and adult male) of the Venn/Eular diagram were organized in broad categories indicative of their biological function (Gene function category and Inferred function) based on the comprehensive assessment of data from Blastp homology, associated GO annotations and InterPro terms.
DOI: 10.6084/m9.figshare.14385402.v1
title: Additional file 2 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 2: Supplementary file 2. Top 100 most abundant transcripts for each life stage of Dermanyssus gallinae (egg, larvae, protonymph, deutonymph, adult female and adult male) based upon the transcript per million (TPM) values. Filtered transcripts: Top 100 most abundant transcripts for each life stage that were manually filtered to removed ribosomal RNA subunits and transcripts with little or no associated annotation. Unfiltered transcripts: Top 100 most abundant transcripts for each life stage with no filtering.
DOI: 10.6084/m9.figshare.14385408.v1
title: Additional file 4 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 4: Supplementary file 4. Summary of inferred transcript functions in selected Venn clades, representing the individual life stages and multiple stage comprising of the ‘blood feeding’ stages of Dermanyssus gallinae. The transcripts localising to the individual life stages (egg, larvae, protonymph, deutonymph, adult female and adult male) and multiple blood feeding life stages (protonymph, deutonymph, adult female and adult male) of the Venn/Eular diagram were organized in broad categories indicative of their biological function (Gene function category and Inferred function) based on the comprehensive assessment of data from Blastp homology, associated GO annotations and InterPro terms.
DOI: 10.6084/m9.figshare.14385414
title: Additional file 6 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 6: Supplementary file 6. Differentially expressed genes (DEGs) at a simulation probability of P &gt; 0.99. Fifteen pairwise comparisons were performed at the simulation probability cut-off of P &gt; 0.99 between the different Dermanyssus gallinae life stages as shown.
DOI: 10.6084/m9.figshare.14385411
title: Additional file 5 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 5: Supplementary file 5. Differentially expressed genes (DEGs) at a simulation probability of P &gt; 0.95. Fifteen pairwise comparisons were performed at the simulation probability cut-off of P &gt; 0.95 between the different Dermanyssus gallinae life stages as shown.
DOI: 10.6084/m9.figshare.14385411.v1
title: Additional file 5 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 5: Supplementary file 5. Differentially expressed genes (DEGs) at a simulation probability of P &gt; 0.95. Fifteen pairwise comparisons were performed at the simulation probability cut-off of P &gt; 0.95 between the different Dermanyssus gallinae life stages as shown.
DOI: 10.6084/m9.figshare.14385414.v1
title: Additional file 6 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 6: Supplementary file 6. Differentially expressed genes (DEGs) at a simulation probability of P &gt; 0.99. Fifteen pairwise comparisons were performed at the simulation probability cut-off of P &gt; 0.99 between the different Dermanyssus gallinae life stages as shown.
DOI: 10.6084/m9.figshare.14385417.v1
title: Additional file 7 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 7: Supplementary file 7. Putative Dermanyssus gallinae homologues of the 39 house dust mite allergens classified by the WHO/International Union of Immunological Societies Allergen Nomenclature Subcommittee (WHO/IUISAN http://www.allergen.org/ ).
DOI: 10.6084/m9.figshare.14385417
title: Additional file 7 of Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

description: Additional file 7: Supplementary file 7. Putative Dermanyssus gallinae homologues of the 39 house dust mite allergens classified by the WHO/International Union of Immunological Societies Allergen Nomenclature Subcommittee (WHO/IUISAN http://www.allergen.org/ ).
DOI: 10.6084/m9.figshare.14385423
title: Additional file 3 of Important ecophysiological roles of non-dominant Actinobacteria in plant residue decomposition, especially in less fertile soils

description: Additional file 2. “Important ecophysiological roles of non-dominant Actinobacteria in plant residue decomposition, especially in less fertile soils”. Table S6. Taxonomic information of species linked to Actinobacteria revealed by co-occurrence network analyses.
DOI: 10.6084/m9.figshare.14385426
title: Additional file 4 of Important ecophysiological roles of non-dominant Actinobacteria in plant residue decomposition, especially in less fertile soils

description: Additional file 3. “Important ecophysiological roles of non-dominant Actinobacteria in plant residue decomposition, especially in less fertile soils”. Table S7. Detailed analysis of CAZyme functions in Actinobacteria metagenome revealed by DNA-SIP based shotgun metagenomic sequencing.
DOI: 10.6084/m9.figshare.14385423.v1
title: Additional file 3 of Important ecophysiological roles of non-dominant Actinobacteria in plant residue decomposition, especially in less fertile soils

description: Additional file 2. “Important ecophysiological roles of non-dominant Actinobacteria in plant residue decomposition, especially in less fertile soils”. Table S6. Taxonomic information of species linked to Actinobacteria revealed by co-occurrence network analyses.
DOI: 10.6084/m9.figshare.14385426.v1
title: Additional file 4 of Important ecophysiological roles of non-dominant Actinobacteria in plant residue decomposition, especially in less fertile soils

description: Additional file 3. “Important ecophysiological roles of non-dominant Actinobacteria in plant residue decomposition, especially in less fertile soils”. Table S7. Detailed analysis of CAZyme functions in Actinobacteria metagenome revealed by DNA-SIP based shotgun metagenomic sequencing.
DOI: 10.6084/m9.figshare.14385433
title: Additional file 1 of Historical trends and new surveillance of Plasmodium falciparum drug resistance markers in Angola

description: Additional file 1: Table S1. Evidence and references supporting summary in Table 1 (XLSX 11 KB)
DOI: 10.6084/m9.figshare.14385433.v1
title: Additional file 1 of Historical trends and new surveillance of Plasmodium falciparum drug resistance markers in Angola

description: Additional file 1: Table S1. Evidence and references supporting summary in Table 1 (XLSX 11 KB)
DOI: 10.6084/m9.figshare.14385436
title: Additional file 2 of Historical trends and new surveillance of Plasmodium falciparum drug resistance markers in Angola

description: Additional file 2: Table S2. PCR primers and cycling conditions (XLSX 14 KB)
DOI: 10.6084/m9.figshare.14385439
title: Additional file 3 of Historical trends and new surveillance of Plasmodium falciparum drug resistance markers in Angola

description: Additional file 3: Table S3. Full genotype results from Cabinda for the 13 loci (XLSX 13 KB)
DOI: 10.6084/m9.figshare.14385442
title: Additional file 4 of Historical trends and new surveillance of Plasmodium falciparum drug resistance markers in Angola

description: Additional file 4: Table S4. Summary of 17 studies of P. falciparum drug resistance markers in Angola (XLSX 13 KB)
DOI: 10.6084/m9.figshare.14385436.v1
title: Additional file 2 of Historical trends and new surveillance of Plasmodium falciparum drug resistance markers in Angola

description: Additional file 2: Table S2. PCR primers and cycling conditions (XLSX 14 KB)
DOI: 10.6084/m9.figshare.14385445.v1
title: Additional file 5 of Historical trends and new surveillance of Plasmodium falciparum drug resistance markers in Angola

description: Additional file 5: Table S5. Calculations of allele frequencies from published count data. Mixed infections, if reported, were considered to contribute two genotypes. If not reported, or insufficiently reported, zero mixed infections were assumed. The year indicates date of sampling (XLSX 19 KB)
DOI: 10.6084/m9.figshare.14385442.v1
title: Additional file 4 of Historical trends and new surveillance of Plasmodium falciparum drug resistance markers in Angola

description: Additional file 4: Table S4. Summary of 17 studies of P. falciparum drug resistance markers in Angola (XLSX 13 KB)
DOI: 10.6084/m9.figshare.14385439.v1
title: Additional file 3 of Historical trends and new surveillance of Plasmodium falciparum drug resistance markers in Angola

description: Additional file 3: Table S3. Full genotype results from Cabinda for the 13 loci (XLSX 13 KB)
DOI: 10.6084/m9.figshare.14385445
title: Additional file 5 of Historical trends and new surveillance of Plasmodium falciparum drug resistance markers in Angola

description: Additional file 5: Table S5. Calculations of allele frequencies from published count data. Mixed infections, if reported, were considered to contribute two genotypes. If not reported, or insufficiently reported, zero mixed infections were assumed. The year indicates date of sampling (XLSX 19 KB)
DOI: 10.6084/m9.figshare.14385456.v1
title: Additional file 2 of An interplay of resource availability, population size and mutation rate potentiates the evolution of metabolic signaling

description: Additional file 2: Details of statistics used in the paper.
DOI: 10.6084/m9.figshare.14385456
title: Additional file 2 of An interplay of resource availability, population size and mutation rate potentiates the evolution of metabolic signaling

description: Additional file 2: Details of statistics used in the paper.
DOI: 10.6084/m9.figshare.14385457
title: Additional file 2 of Development and validation of The Breaking Bad News Attitudes Scale

description: Additional file 2. BBNAS Scoring Calculator. A spreadsheet to calculate the BBNAS score.
DOI: 10.6084/m9.figshare.14385489
title: Additional file 10 of Integration of Infinium and Axiom SNP array data in the outcrossing species Malus × domestica and causes for seemingly incompatible calls

description: Additional file 10. Families used for the improvement of the 20 K integrated genetic linkage map.
DOI: 10.6084/m9.figshare.14385489.v1
title: Additional file 10 of Integration of Infinium and Axiom SNP array data in the outcrossing species Malus × domestica and causes for seemingly incompatible calls

description: Additional file 10. Families used for the improvement of the 20 K integrated genetic linkage map.
DOI: 10.6084/m9.figshare.14385495
title: Additional file 2 of Integration of Infinium and Axiom SNP array data in the outcrossing species Malus × domestica and causes for seemingly incompatible calls

description: Additional file 2. Changes in position of SNP markers of 9685 SNPs included in this study that were also included in the iGL map [15].