cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15482/usda.adc/28914434.v1
title: Data from: Topographic position index predicts within-field yield variation in a dryland cereal production system

description: We investigated drivers of sub-field spatial variability in yield for 3 crops (hard red winter wheat, <i>Triticum aestivum</i> L. variety Langin; corn, <i>Zea mays</i> L.; and proso millet, <i>Panicum milaceum</i> L.) usings this multi-year dataset from a dryland research farm in northeastern Colorado, USA. The dataset spanned 18 2.6-4.3 ha management units collected over 4 years (2019-2022). The data includes high resolution topographic data collected via real-time kinematic GPS, densely sampled soil texture and chemical properties, and meteorological data from an on-site weather station.
DOI: 10.15482/usda.adc/26863258
title: Dataset from: Variation in patterns of production and water-use efficiency among agroecosystems across the LTAR Network

description: Across agroecosystems, water is a key driver of primary production, and thus, the relationship between water and production (i.e., water-use efficiency; WUE) provides a relevant indicator for evaluating agroecosystem function. These data were used to characterize this relationship spanning diverse agroecosystems and climates represented by the USDA’s Long-Term Agroecosystem Research (LTAR) network. This dataset contains precipitation and aboveground net primary production (ANPP) across an extensive set of rainfed production systems and climate conditions, including rangelands, croplands, and pasturelands that span a precipitation gradient of 265-1347 mm yr<sup>-1</sup>. Data include long-term ANPP data from fifteen LTAR sites collected between 1983 and 2022, with record lengths ranging from 5 to 38 years, and corresponding annual precipitation amounts. These long-term data serve as an important resource for understanding how shifts in water availability with climate change may impact the ability of agricultural lands to produce the resources needed to support a growing human population.
DOI: 10.6084/m9.figshare.27760341
title: Cryo-EM structures of inactive human arginine-vasopressin V2 receptor with inverse agonists

description: cryo-EM structure of inactive human arginine-vasopressin (AVP) V2 receptor (V2R) with inverse agonists
DOI: 10.6084/m9.figshare.27760341.v1
title: Cryo-EM structures of inactive human arginine-vasopressin V2 receptor with inverse agonists

description: cryo-EM structure of inactive human arginine-vasopressin (AVP) V2 receptor (V2R) with inverse agonists
DOI: 10.5281/zenodo.5484250
title: Philosophy [IO Bijapur 140] مَمْزُوج

description: Philosophy.

This manuscript is now IO Bijapur 140 in the India Office collections.

[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 539 here with further notations and hyperlinks].


539.

B 140. Size 71/4 in. by 43/4 in.; foll. 32. Seventeen lines in a page.

Another Commentary (by قوله ) on the first part of the Tahdhîb, by Jalâl al-dîn Muḥammad b. As’ad DAWWÂNÎ (d. A.H. 907 or 908 [=1512-13 CE]). See Ḥ. Kh. ii. 480, and Cat. St. Petersb. 67 sq. The first portion of it was printed (at Lakhnau?) A.H. 1264.

Very neatly written in Nasta’lîḳ, by Muḥammad Riḍa b. Ismâ’îl, at Shîrâz, about A.H. 1000. Additions by the author, and other notes, are on the margin.

Bîj. Libr., A.H. 1026, from the Nawwâb (Shâh Nawâz Khân).
DOI: 10.5281/zenodo.5484251
title: Philosophy [IO Bijapur 140] مَمْزُوج

description: Philosophy.

This manuscript is now IO Bijapur 140 in the India Office collections.

[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 539 here with further notations and hyperlinks].


539.

B 140. Size 71/4 in. by 43/4 in.; foll. 32. Seventeen lines in a page.

Another Commentary (by قوله ) on the first part of the Tahdhîb, by Jalâl al-dîn Muḥammad b. As’ad DAWWÂNÎ (d. A.H. 907 or 908 [=1512-13 CE]). See Ḥ. Kh. ii. 480, and Cat. St. Petersb. 67 sq. The first portion of it was printed (at Lakhnau?) A.H. 1264.

Very neatly written in Nasta’lîḳ, by Muḥammad Riḍa b. Ismâ’îl, at Shîrâz, about A.H. 1000. Additions by the author, and other notes, are on the margin.

Bîj. Libr., A.H. 1026, from the Nawwâb (Shâh Nawâz Khân).
DOI: 10.15468/dl.35tkh7
title: Occurrence Download

description: A dataset containing 25822 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Trapa L."
 ]
}

 The dataset includes 25822 records from 379 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001034-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ghbdxg
title: Occurrence Download

description: A dataset containing 2276650 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Leucania phragmitidicola Guenée, 1852, Leucania farcta Grote, 1881, Eurysanoides rubripes (Matsumura, 1910), Eurysa forficula (Horváth, 1908), Stenocranus minutus (Fabricius, 1787), Zyginidia mocsaryi (Horváth, 1910), Eurybregma nigrolineata Scott, 1875, Hydraecia immanis Guenée, 1852, Mythimna impura Hübner, 1808, Cicadula quadripunctata (de Villers, 1789), Ctenucha rubroscapus Ménétriés, 1857, Glyphipterix simpliciella (Stephens, 1834), Pararge petropolitana (Fabricius, 1787), Leucania multilinea Walker, 1856, Athysanus argentarius Metcalf, 1955, Rhopalus parumpunctatus Schilling, 1829, Erebia aethiops Esper, 1777, Euptychia cymela Cramer, 1779, Abacarus hystrix (Nalepa, 1896), Cygnus buccinator Richardson, 1831, Stenobothrus lineatus (Panzer, 1796), Messor structor (Latreille, 1798), Anthomyza elbergi Andersson, 1976, Agromyza cinerascens Macquart, 1835, Hypocrea spinulosa Fuckel, Stagonospora subseriata (Desm.) Sacc., Tenthredopsis litterata (Geoffroy, 1785), Tenthredopsis nassata (Linnaeus, 1767), Lasiosphaeria dactylina J.Webster, Limonomyces culmigenus (R.K.Webster & D.A.Reid) Stalpers & Loer., Ammodramus savannarum (J.F.Gmelin, 1789), Spermestes cucullata Swainson, 1837, Uraeginthus angolensis (Linnaeus, 1758), Bombus ephippiatus Say, 1837, Distantasca theroni (Gerard, 1972), Aphrissa statira (Cramer, 1777), Charaxes guderiana (Dewitz, 1879), Charaxes jahlusa (Trimen, 1862), Cladobrostis melitricha Meyrick, 1921, Dichomeris crepitatrix Meyrick, 1913, Dichomeris eridantis (Meyrick, 1907), Clytie infrequens Swinhoe, 1884, Plecoptera ferrilineata Swinhoe, 1895, Procometis spoliatrix (Meyrick, 1916), Omiodes origoalis (Walker, 1859), Leucoptera sphenograpta Meyrick, 1911, Cryptotympana corvus (Walker, 1850), Hypsopygia mauritialis (Boisduval, 1833), Agrilus cyanipennis Gory & Laporte, 1837, Encarsia confusa Hayat, 1989)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2276650 records from 1694 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009090-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28840679
title: <i>Selected Input and Output Files for</i> <b>Data-driven detection of candidate enhancer-activating and repressing SNPs in immune regulation in the Tyrolean population</b>

description: Research has shown that non‑coding single nucleotide polymorphisms (SNPs) can modulate gene expression by enhancing or disrupting transcription‑factor binding sites. Leveraging whole‑genome sequencing and matched RNA‑sequencing from 23 individuals native to the Tyrolean Alps, we applied our data‑driven protocol to systematically scan each individual for mutations that create <i>de novo</i> gamma‑interferon‑activated sequence (GAS) motifs and therefore into potential activating enhancer elements (creator SNPs) or abolish existing sites (destroyer SNPs). Of approximately 17 million nearly complete GAS motifs (i.e., five out of six matching nucleotides; ncGAS) and approximately 2.4 million genuine GAS motifs, the cohort carried 15,014 creator and 19,779 destroyer SNPs. Of those, 676 creators and 732 destroyers lay within ±10 kb of immune‑related genes. Integrating transcript abundance revealed 33 creator‑associated and 56 destroyer‑associated genes with significant expression changes of nearby genes. H3K27ac ChIP‑seq in peripheral‑blood mononuclear cells aligned well with three creator SNPs, potentially affecting <i>CASP1</i> (rs1045872680), <i>DOCK10</i> (rs149378511), and <i>PICALM</i> (rs41381550), and three destroyer SNPs, potentially affecting <i>CCR1</i> (rs34919616), HDAC4 (rs1476145875), and <i>ORAI1</i> (rs116376569) with potential cytokine‑responsive enhancers. Our study demonstrates that SNPs can create or destroy enhancer elements and thereby alter the expression of immune pathway genes in humans. The scalable framework lays the groundwork for larger multi‑ethnic screens to chart regulatory variants, refine disease biomarkers, and guide precision immunomodulation. With this analysis, we underscore a simple yet powerful premise: one base change can shift the balance of human immunity—mapping those changes charts the path to tailored interventions.
DOI: 10.6084/m9.figshare.29181287
title: 250529_Data

description: Corneal epithelium in keratoconus
DOI: 10.15468/dl.qnb7qw
title: Occurrence Download

description: A dataset containing 28935 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Heterobasidion annosum (Fr.) Bref."
 ]
}

 The dataset includes 28935 records from 347 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006588-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14605246
title: (14)-Strobl2025A-DS0001 – SLICE-1 – Tribolium castaneum AGOC{ATub'Cytok8°NB-mEmerald} #1 subline long-term live imaging dataset of embryonic development acquired with light sheet fluorescence microscopy

description: (14)-Strobl2025A-DS0001 – SLICE-1 – Tribolium castaneum AGOC{ATub'Cytok8°NB-mEmerald} #1 subline long-term live imaging dataset of embryonic development acquired with light sheet fluorescence microscopy
DOI: 10.15468/dl.nkska2
title: Occurrence Download

description: A dataset listing the 45 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Kazakhstan",
 "TaxonKey is Crassiclitellata"
 ]
}

 The dataset's 45 records were derived from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006554-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18323586
title: Dataset for Automated Recognition of Genetic Geomorphology Based on Google Earth Engine and Multi-Feature Fusion in Central Asia

description: This dataset supports the research on automated recognition of genetic geomorphology in Central Asia. It includes:

-The Xinjiang genetic geomorphology data

-Sample points

-The soil data
DOI: 10.5281/zenodo.18323587
title: Dataset for Automated Recognition of Genetic Geomorphology Based on Google Earth Engine and Multi-Feature Fusion in Central Asia

description: This dataset supports the research on automated recognition of genetic geomorphology in Central Asia. It includes:

-The Xinjiang genetic geomorphology data

-Sample points

-The soil data
DOI: 10.5281/zenodo.17829610
title: PLEKHG1 deficiency is associated with aberrant developmental B cell trajectories

description: This repository contains the processed data from the single cell multiomics analysis related to the manuscript "PLEKHG1 deficiency is associated with aberrant developmental B cell trajectories", and reproducibility code.

The data is stored in the AnnData format and can be generated from the raw data in GEO:GSE312612 following the pre-processing scripts found in the code folder. It can also be used directly to follow our analysis scripts to reproduce the figures from the publication.

The repository only contains the minimal necessary code to reproduce the figures from the publications for reviewing purposes. Extensive and mantained coded is available in the associated Github repository.

To run the code, please unzip the compressed folders, and move the .h5ad files to data/adata .
DOI: 10.5281/zenodo.17829609
title: PLEKHG1 deficiency is associated with aberrant developmental B cell trajectories

description: This repository contains the processed data from the single cell multiomics analysis related to the manuscript "PLEKHG1 deficiency is associated with aberrant developmental B cell trajectories", and reproducibility code.

The data is stored in the AnnData format and can be generated from the raw data in GEO:GSE312612 following the pre-processing scripts found in the code folder. It can also be used directly to follow our analysis scripts to reproduce the figures from the publication.

The repository only contains the minimal necessary code to reproduce the figures from the publications for reviewing purposes. Extensive and mantained coded is available in the associated Github repository.

To run the code, please unzip the compressed folders, and move the .h5ad files to data/adata .
DOI: 10.57841/casdc.0006984
title: 铁基超导前驱粉微观形貌
DOI: 10.25345/c54j0bb2v
title: MassIVE MSV000100537 - Cell-autonomous and non-cell-autonomous roles of Rptor in cortical development and postnatal neuron maintenance
title: The aim of this study is to dissect the cell-autonomous from the non-cell-autonomous role of Rptor in both cortical development and postnatal neuron maintenance, specifically, the proteomic variations induced at different developmental time points by either the absence of Rptor within a wild type environment (Rptor mosaic) or complete loss of Rptor function (Rptor cKO). Cortical samples for the three distinct phenotypes (wild type, Rptor mosaic and Rptor cKO) during three ages (E13, E16 and P0) were labelled with TMT-10plex and combined per time point (each combined sample containing 3 biological replicates of 3 genotypes at one time point, plus 1 time point-specific IRS mixed sample).
DOI: 10.5281/zenodo.18311260
title: Road files for all continental SSA countries

description: GeoPackage (.gpkg extension) files for country roads of all continental Sub-Saharan African countries (44) as of September 2025. The query was done through the OSMnx python package (Boeing, G. (2025). Modeling and Analyzing Urban Networks and Amenities with OSMnx. Geographical Analysis 57 (4), 567-577. doi:10.1111/gean.70009), which sources and downloads features from OpenStreetMap. 

The query specifically sourced the following road types: motorway, motorway link, trunk, trunk link, primary, primary link, secondary, secondary link, tertiary, and tertiary link.

These files can be used to support open-data and geospatial based modelling tools such as OnSSET and OnStove, and any other open-data modelling or analysis efforts.

This work was supported by the Climate Compatible Growth Programme (#CCG) of the UK's Foreign Development and Commonwealth Office (FCDO).
DOI: 10.5281/zenodo.18311261
title: Road files for all continental SSA countries

description: GeoPackage (.gpkg extension) files for country roads of all continental Sub-Saharan African countries (44) as of September 2025. The query was done through the OSMnx python package (Boeing, G. (2025). Modeling and Analyzing Urban Networks and Amenities with OSMnx. Geographical Analysis 57 (4), 567-577. doi:10.1111/gean.70009), which sources and downloads features from OpenStreetMap. 

The query specifically sourced the following road types: motorway, motorway link, trunk, trunk link, primary, primary link, secondary, secondary link, tertiary, and tertiary link.

These files can be used to support open-data and geospatial based modelling tools such as OnSSET and OnStove, and any other open-data modelling or analysis efforts.

This work was supported by the Climate Compatible Growth Programme (#CCG) of the UK's Foreign Development and Commonwealth Office (FCDO).
DOI: 10.15468/dl.2z2y8e
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((101.261 1.422183, 101.190716 1.416615, 101.122163 1.400048, 101.05703 1.372891, 100.996922 1.335812, 100.943319 1.289725, 100.897541 1.235765, 100.860715 1.175261, 100.833747 1.109704, 100.8173 1.040707, 100.811778 0.96997, 100.817318 0.899234, 100.833782 0.830242, 100.860763 0.764691, 100.897598 0.704195, 100.943379 0.650244, 100.996979 0.604167, 101.057078 0.567096, 101.122198 0.539945, 101.190734 0.523383, 101.261 0.5178160000000001, 101.331266 0.523383, 101.399802 0.539945, 101.464922 0.567096, 101.525021 0.604167, 101.578621 0.650244, 101.624402 0.704195, 101.661237 0.764691, 101.688218 0.830242, 101.704682 0.899234, 101.710222 0.96997, 101.7047 1.040707, 101.688253 1.109704, 101.661285 1.175261, 101.624459 1.235765, 101.578681 1.289725, 101.525078 1.335812, 101.46497 1.372891, 101.399837 1.400048, 101.331284 1.416615, 101.261 1.422183))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002082-260120142942310/datasets/export for details.
DOI: 10.15468/dl.nefg3a
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Centrophorus tessellatus"
 ]
}

 The dataset includes 40 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002080-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6cy4cz
title: Occurrence Download

description: A dataset containing 122 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "TaxonKey is Puccinia striiformis",
 "Year 1970-2026"
 ]
}

 The dataset includes 122 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002081-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dmwwk3
title: Occurrence Download

description: A dataset containing 72356 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pinus mugo)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is Europe"
 ]
}

 The dataset includes 72356 records from 265 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002050-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.95tys6
title: Occurrence Download

description: A dataset containing 477 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Saudi Arabia",
 "GadmGid is SAU.7.20_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2015-2015"
 ]
}

 The dataset includes 477 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002085-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.npyfas
title: Occurrence Download

description: A dataset containing 28643 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Thecamoeba, Vannella, Rhizamoeba, Pelomyxa, Heleopera, Padaungiella, Hyalosphenia, Arcella, Centropyxis)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 28643 records from 343 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002083-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qg5hs4
title: Occurrence Download

description: A dataset containing 3872611 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is France",
 "DatasetKey is Faune Occitanie : Saisie naturaliste opportuniste-Données opportunistes OISEAUX de Faune-Occitanie",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3872611 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002075-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8s9mdx
title: Occurrence Download

description: A dataset listing the 795 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry MULTIPOLYGON(((3.05824 46.70636,3.06723 46.69726,3.06672 46.69559,3.07048 46.69511,3.07611 46.68961,3.07697 46.68596,3.07561 46.6835,3.07882 46.67538,3.07736 46.66936,3.07129 46.66431,3.08377 46.65648,3.09136 46.65624,3.09453 46.66141,3.09838 46.66099,3.09986 46.66352,3.1045 46.66348,3.10697 46.66538,3.10839 46.66706,3.10732 46.66912,3.11636 46.66844,3.11936 46.66655,3.1222 46.6682,3.12751 46.66812,3.12918 46.66905,3.12814 46.66993,3.12973 46.67039,3.13005 46.67402,3.12763 46.67401,3.12768 46.67511,3.14138 46.67821,3.14696 46.68119,3.14514 46.68297,3.14745 46.68327,3.1469 46.68748,3.15436 46.69296,3.15374 46.69468,3.15113 46.69533,3.15189 46.6973,3.14975 46.70221,3.14421 46.70889,3.14605 46.71044,3.13864 46.71684,3.13141 46.72605,3.12349 46.72922,3.08754 46.73597,3.08364 46.73784,3.08074 46.73453,3.08318 46.73301,3.07779 46.72636,3.08209 46.72402,3.08124 46.72196,3.06935 46.715,3.06591 46.71529,3.06269 46.71335,3.0633 46.70946,3.05824 46.70636)))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 795 records were derived from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002076-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.