cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14413622.v1
title: Supplementary Material for: Development of an Implementation Framework for Overcoming Underdiagnoses of Familial Hypercholesterolemia in the USA

description: Familial hypercholesterolemia (FH) is a genetic condition which causes elevated low-density lipoprotein cholesterol from birth. With a prevalence of 1 in 250 and the availability of effective treatments, the diagnostic rate of &lt;1 to 10% is unacceptably low. Screening for FH is supported by multiple organizations, but it has not been broadly adopted and implemented across the USA. To investigate the implementation of FH screening, key informants were recruited from across the USA for their expertise in FH-related literature, guidelines, public health, and/or advocacy to complete ­semistructured interviews guided by implementation science (RE-AIM framework). Sixteen semistructured interviews were analyzed with directed content and thematic analyses, yielding specific barriers and recommendations to improve FH screening. Barriers to FH screening included patient recruitment and participation, equitable access to healthcare, provider discomfort with screening and treating FH, provider burden, lack of public health and legislative support, FH awareness, guideline complexity, facilitation of genetic testing and cascade screening, and lack of coordination between stakeholders. Awareness, engagement, communication, and collaboration between stakeholders is integral to successful FH screening. Individualized plans will be required at national, regional, and institutional levels. FH screening implementation can be achieved through practice facilitation, streamlined screening approaches, electric medical record tools, and consensus guidelines to increase screening adoption and consistent delivery. Reliable funding and established lines of communication between stakeholders can maintain efforts as FH screening progresses.
DOI: 10.5281/zenodo.726917
title: The CERDI-seadistance database V1.1

description: The database provides information on bilateral sea distances between any pair of countries; see Bertoli, S., M. Goujon, O. Santoni (2016), "The CERDI-seadistance database", CERDI Working Paper No. 2016/07 for a description of the methodology used to build the database. Paper available here : http://cerdi.org/production/show/id/1791/type_production_id/1 It's an update of the database published at the following adress : https://zenodo.org/record/46822 See <em>readme</em> file for details.
DOI: 10.6084/m9.figshare.14413661
title: A valuable technique for humeral head height and retroversion in hemiarthroplasty: Technical note and outcome

description: 1. This paper presents a novel method to determine the humeral head height and retroversion. 2. It's a way to deal with trauma basing on the concept of trauma. The free humeral head is placed at the distal end of the fracture. A hole is drilled into the greater tuberosity ridge of the humerus. The distance from the key hole to the lateral edge of the humeral head joint surface is set as the distance from the key hole to the outer edge of the humeral head prosthesis, so as to determine the height of the prosthesis.3. This operation is simple and easy to be accepted by orthopedic surgeons.
DOI: 10.6084/m9.figshare.14413661.v1
title: A valuable technique for humeral head height and retroversion in hemiarthroplasty: Technical note and outcome

description: 1. This paper presents a novel method to determine the humeral head height and retroversion. 2. It's a way to deal with trauma basing on the concept of trauma. The free humeral head is placed at the distal end of the fracture. A hole is drilled into the greater tuberosity ridge of the humerus. The distance from the key hole to the lateral edge of the humeral head joint surface is set as the distance from the key hole to the outer edge of the humeral head prosthesis, so as to determine the height of the prosthesis.3. This operation is simple and easy to be accepted by orthopedic surgeons.
DOI: 10.17037/data.00001955
title: Respectful Maternity Care – Facility Births Experience – Data collection tools

description: The IDEAS study was conducted to understand the manifestation and prevalence of respectful maternity care, and mistreatment of women during institutional delivery in Gombe state, Nigeria. Qualitative data was collected using a combination of in-depth interviews and focus group discussions conducted with women who had recently given birth in government facilities. The data collection tools made available cover several themes, including their experience accessing care, and their reflection on the quality of care received.
description: The study was conducted to understand the manifestation and prevalence of respectful maternity care, and mistreatment of women during institutional delivery in Gombe state, Nigeria. Qualitative data was collected using a combination of in-depth interviews and focus group discussions conducted with women who had recently given birth in government facilities. We wanted to know their experience accessing care, and their reflection on the quality of care received. We used this data to refine our quantitative tools, and to develop a discrete choice experiment (DCE). These were conducted in English and Hausa. Interviews and focus groups were held in two local government facilities, one with high facility delivery and one with low facility delivery.
DOI: 10.5281/zenodo.4686627
title: Guided Research: Assessment of Software Security Standard Compliance in Continuous Software Engineering - Dataset

description: This dataset contains the artefacts gathered for the purpose of training and testing the demonstrator of the guided research.
DOI: 10.5281/zenodo.4686626
title: Guided Research: Assessment of Software Security Standard Compliance in Continuous Software Engineering - Dataset

description: This dataset contains the artefacts gathered for the purpose of training and testing the demonstrator of the guided research.
DOI: 10.6084/m9.figshare.14413682.v1
title: A valuable technique for humeral head height and retroversion in hemiarthroplasty: Technical note and outcome

description: 1. This paper presents a novel method to determine the humeral head height and retroversion. 2. It's a way to deal with trauma basing on the concept of trauma. The free humeral head is placed at the distal end of the fracture. A hole is drilled into the greater tuberosity ridge of the humerus. The distance from the key hole to the lateral edge of the humeral head joint surface is set as the distance from the key hole to the outer edge of the humeral head prosthesis, so as to determine the height of the prosthesis.3. This operation is simple and easy to be accepted by orthopedic surgeons.
DOI: 10.6084/m9.figshare.14413682
title: A valuable technique for humeral head height and retroversion in hemiarthroplasty: Technical note and outcome

description: 1. This paper presents a novel method to determine the humeral head height and retroversion. 2. It's a way to deal with trauma basing on the concept of trauma. The free humeral head is placed at the distal end of the fracture. A hole is drilled into the greater tuberosity ridge of the humerus. The distance from the key hole to the lateral edge of the humeral head joint surface is set as the distance from the key hole to the outer edge of the humeral head prosthesis, so as to determine the height of the prosthesis.3. This operation is simple and easy to be accepted by orthopedic surgeons.
DOI: 10.25345/c5d81c
title: MassIVE MSV000087190 - Occurrence and Distribution of Pharmaceuticals and their Transformation Products in Luxembourgish Surface Waters
title: Data files generated from the analysis of SPE-concentrated surface water samples collected in different rivers in Luxembourg between 2019 and 2020 through the collaborative work between the Environmental Cheminformatics Group, Luxembourg Centre for Systems Biomedicine and the Luxembourg Water Management Agency.
DOI: 10.6084/m9.figshare.14402363
title: rat intestinal data

description: We determined the 12-week NR supplementation regimen results on the gut microbiota composition of cecal samples of high-fat diet-fed (HFD) rats (jejunum, ileum, cecum, proximal and distal colon).
DOI: 10.6084/m9.figshare.13513638
title: Analysis of inferior nasal turbinate width and concha bullosa in subjects with nasal septum deviation. - A Cone Beam Tomography Study

description: Analysis of inferior nasal turbinate width and concha bullosa in subjects with nasal septum deviation. - A Cone Beam Tomography Study
DOI: 10.6084/m9.figshare.13513638.v1
title: Analysis of inferior nasal turbinate width and concha bullosa in subjects with nasal septum deviation. - A Cone Beam Tomography Study

description: Analysis of inferior nasal turbinate width and concha bullosa in subjects with nasal septum deviation. - A Cone Beam Tomography Study
DOI: 10.5281/zenodo.4428814
title: Exploring the Blueprint of Photoprotection in Mycosporine-like Amino Acids

description: Microorganisms require protection against the potentially damaging effects of ultraviolet radiation exposure. Photoprotection is, in part, provided by mycosporine-like amino acids (MAAs). Previous reports have proposed that nonradiative decay mediates the impressive photoprotection abilities of MAAs. In this letter, we present the first ultrafast dynamics study of two MAAs, shinorine and porphyra-334. We demonstrate that, in aqueous solution, these MAAs relax along their S<sub>1</sub> coordinates toward the S<sub>1</sub>/S<sub>0</sub> conical intersection within a few hundred femtoseconds after photoexcitation and then traverse the conical intersection and vibrationally cool in approximately 1 ps through heat transfer to the solvent. This new insight allows a quintessential component of microbial life to be unraveled and informs the development of molecular photon-to-heat converters for a myriad of applications.
DOI: 10.5281/zenodo.4428813
title: Exploring the Blueprint of Photoprotection in Mycosporine-like Amino Acids

description: Microorganisms require protection against the potentially damaging effects of ultraviolet radiation exposure. Photoprotection is, in part, provided by mycosporine-like amino acids (MAAs). Previous reports have proposed that nonradiative decay mediates the impressive photoprotection abilities of MAAs. In this letter, we present the first ultrafast dynamics study of two MAAs, shinorine and porphyra-334. We demonstrate that, in aqueous solution, these MAAs relax along their S<sub>1</sub> coordinates toward the S<sub>1</sub>/S<sub>0</sub> conical intersection within a few hundred femtoseconds after photoexcitation and then traverse the conical intersection and vibrationally cool in approximately 1 ps through heat transfer to the solvent. This new insight allows a quintessential component of microbial life to be unraveled and informs the development of molecular photon-to-heat converters for a myriad of applications.
DOI: 10.6084/m9.figshare.14413730
title: Analysis of inferior nasal turbinate width and concha bullosa in subjects with nasal septum deviation. - A Cone Beam Tomography Study (dataset)

description: dataset
DOI: 10.6084/m9.figshare.14413730.v1
title: Analysis of inferior nasal turbinate width and concha bullosa in subjects with nasal septum deviation. - A Cone Beam Tomography Study (dataset)

description: dataset
DOI: 10.5281/zenodo.4686663
title: Trained BERT models for phrase alignment with the constrained tree edit distance algorithm

description: These are the trained BERT models for phrase alignment with the constrained tree edit distance algorithm, published at EMNLP2020. Yuki Arase and Jun'ichi Tsujii. 2020. Compositional Phrase Alignment and Beyond. in Proc. of the Conference on Empirical Methods in Natural Language Processing (EMNLP), pp. 1611-1623. Source codes are available at GitHub When you use these models, please cite the following paper. @inproceedings{arase-tsujii-2020-compositional,<br> title = "Compositional Phrase Alignment and Beyond",<br> author = "Arase, Yuki and<br> Tsujii, Jun{'}ichi",<br> booktitle = "Proceedings of the 2020 Conference on Empirical Methods in Natural Language Processing (EMNLP)",<br> month = nov,<br> year = "2020",<br> address = "Online",<br> publisher = "Association for Computational Linguistics",<br> url = "https://www.aclweb.org/anthology/2020.emnlp-main.125",<br> doi = "10.18653/v1/2020.emnlp-main.125",<br> pages = "1611--1623"<br> }
description: {"references": ["https://www.aclweb.org/anthology/2020.emnlp-main.125/"]}
DOI: 10.5281/zenodo.4686662
title: Trained BERT models for phrase alignment with the constrained tree edit distance algorithm

description: These are the trained BERT models for phrase alignment with the constrained tree edit distance algorithm, published at EMNLP2020. Yuki Arase and Jun'ichi Tsujii. 2020. Compositional Phrase Alignment and Beyond. in Proc. of the Conference on Empirical Methods in Natural Language Processing (EMNLP), pp. 1611-1623. Source codes are available at GitHub When you use these models, please cite the following paper. @inproceedings{arase-tsujii-2020-compositional,<br> title = "Compositional Phrase Alignment and Beyond",<br> author = "Arase, Yuki and<br> Tsujii, Jun{'}ichi",<br> booktitle = "Proceedings of the 2020 Conference on Empirical Methods in Natural Language Processing (EMNLP)",<br> month = nov,<br> year = "2020",<br> address = "Online",<br> publisher = "Association for Computational Linguistics",<br> url = "https://www.aclweb.org/anthology/2020.emnlp-main.125",<br> doi = "10.18653/v1/2020.emnlp-main.125",<br> pages = "1611--1623"<br> }
description: {"references": ["https://www.aclweb.org/anthology/2020.emnlp-main.125/"]}
DOI: 10.5285/be37166c-7dc3-47a0-a6ab-2a2794a4db2d
title: Dissolved methane concentrations in groundwater

description: This dataset contains dissolved methane concentrations from groundwater in Great Britain, predominantly from England. Data were collated in Microsoft Excel (.xlsx) format from four publicly accessible sources: the British Geological Survey (from Bell et al., 2017), the Environment Agency for England (from the online Water Quality Archive), and local baseline data for the shale gas sites of Preston New Road (from Cuadrilla Resources) and Kirby Misperton (from Third Energy). In total, 2997 dissolved methane concentrations are included in the dataset and were collected from 922 unique locations from October 1992 to July 2018. The data were used within a Bayesian framework to create a dynamic baseline (a baseline that can change in time and space to reflect ongoing environmental change) that can predict the probability that a change in dissolved methane concentration has occurred, for example in the context of monitoring aquifers at shale gas sites using hydraulic fracturing methods. The data presented are the underlying dataset to Wilson et al., 2020, Science of the Total Environment: https://doi.org/10.1016/j.scitotenv.2019.134854. Bell, R. A., Darling, W. G., Ward, R. S., Basava-Reddi, L., Halwa, L., Manamsa, K., & Dochartaigh, B. Ó. (2017). A baseline survey of dissolved methane in aquifers of Great Britain. Science of the Total Environment, 601, 1803-1813. Wilson, M. P., Worrall, F., Davies, R. J., & Hart, A. (2020). A dynamic baseline for dissolved methane in English groundwater. Science of The Total Environment, 711, 134854.
DOI: 10.5255/ukda-sn-854760
title: Clinical Practice Guidelines on the Diagnosis and Management of Polycystic Ovary Syndrome: A Systematic Review and Quality Assessment Study, 2007-2018

description: Clinical practice guidelines (CPGs) are key instruments to implement the practice of evidence-based medicine. We aimed to evaluate the methodological quality and variations in CPGs recommendations on the diagnosis and management of polycystic ovary syndrome (PCOS). We searched MEDLINE, EMBASE, and CENTRAL until December 2020 for all evidence-based CPGs and consensus statements on PCOS. We extracted data in duplicate to map clinical recommendations across pre-specified disease domains and assessed CPGs methodological quality of using the AGREE II tool. We included thirteen PCOS CPGs were published between 2007-2018. CPGs recommendations were mostly focused on screening for and managing metabolic disease (12/13, 92%), followed by cardiovascular risk assessment (10/13, 77%). Mental health (8/13, 62%) and diagnosis in adolescents (7/13, 54%) were the least reported domains. Most CPGs had a high quality for scope and purpose description (12/13, 92%) while stakeholder’s involvement and applicability of recommendations to clinical practice were appropriate in only two CPGs (2/13, 15%). We identified inconsistency in recommendations on PCOS diagnosis in adolescents, optimal lifestyle interventions, hirsutism and acne treatments, interventions to reduce the risk of ovarian hyperstimulation syndrome, the frequency and screening criteria for metabolic and cardiovascular disease, and on optimal screening tools for mental health illness in women with PCOS. Current CPGs on the diagnosis and management of PCOS vary in their scope and methodological quality which may hinder evidence translation into clinical practice. We identified disease domains with existing evidence gap to guide future research and guideline updates.
DOI: 10.6084/m9.figshare.14345960.v3
title: Data for Cole et al. - "Spatial variation in phenological responses to climate change linked to declines in primary producer health"

description: All data files needed to replicate the analyses presented in "Spatial variation in phenological responses to climate change linked to declines in primary producer health"
DOI: 10.11583/dtu.14153204
title: Wind resource data from the tall Risø met mast

description: This dataset consists of 10-minute averaged measurements of wind speed, wind direction, air humidity, air temperature, atmospheric pressure and solar radiation. Specifically wind speed measurements were acquired at 44 m, 77 m, and 125 m above the ground level (agl), whereas the wind direction measurements were acquired at 77 m and 125 m agl. The wind speed measurements were acquired using mainly cup anemometers, while wind direction measurements were acquired using wind vanes. The measurement period includes 12 years of measurements, which starts in 1995. The met mast surrounding can be classified as a flat(flat landscape) coastal(water and land) site. <br>The dataset has been proven to be useful beyond wind energy, such as for tracking storm surges across the country, estimating contaminated regions for transient events as different as nuclear and industrial accidents and air borne diseases.<br><br>The dataset is provided as two NetCDF files 1) Risoe_m_concurrent.nc only includes periods when all sensors concurrently operated. <br>2) Risoe_m_all.nc includes all measurement periods for all sensors, so it contains NaN values for periods when sensors were not operational<br><br>NetCDF files contain both data and metadata.<br>Further information about this dataset can be found at:https://gitlab.windenergy.dtu.dk/fair-data/winddata-revamp/winddata-documentation/-/blob/master/risoe_m.md<br><br>as well in the referenced reports:http://doi.org/10.5281/zenodo.4580574<br>http://doi.org/10.5281/zenodo.4580722<br><br><br>
DOI: 10.11583/dtu.14153204.v1
title: Wind resource data from the tall Risø met mast

description: This dataset consists of 10-minute averaged measurements of wind speed, wind direction, air humidity, air temperature, atmospheric pressure and solar radiation. Specifically wind speed measurements were acquired at 44 m, 77 m, and 125 m above the ground level (agl), whereas the wind direction measurements were acquired at 77 m and 125 m agl. The wind speed measurements were acquired using mainly cup anemometers, while wind direction measurements were acquired using wind vanes. The measurement period includes 12 years of measurements, which starts in 1995. The met mast surrounding can be classified as a flat(flat landscape) coastal(water and land) site. <br>The dataset has been proven to be useful beyond wind energy, such as for tracking storm surges across the country, estimating contaminated regions for transient events as different as nuclear and industrial accidents and air borne diseases.<br><br>The dataset is provided as two NetCDF files 1) Risoe_m_concurrent.nc only includes periods when all sensors concurrently operated. <br>2) Risoe_m_all.nc includes all measurement periods for all sensors, so it contains NaN values for periods when sensors were not operational<br><br>NetCDF files contain both data and metadata.<br>Further information about this dataset can be found at:https://gitlab.windenergy.dtu.dk/fair-data/winddata-revamp/winddata-documentation/-/blob/master/risoe_m.md<br><br>as well in the referenced reports:http://doi.org/10.5281/zenodo.4580574<br>http://doi.org/10.5281/zenodo.4580722<br><br><br>
DOI: 10.5281/zenodo.4686667
title: proactivWorkflow: Identifying active and alternative promoters from RNA-Seq data with proActiv

description: This data set comprises one tar file containing all files necessary for the running of the proactivWorkflow package. Directory TCGA_Kidney_Junction_Files contains processed junction files (BED) of KIRC normal and tumour samples (Source: The Cancer Genome Atlas Research Network, https://portal.gdc.cancer.gov/) Directory Yan_Junction_Files contains processed junction files (BED) of human preimplantation embryos and human embryonic stem cells (Source: GSE36552, https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE36552) gencode.v19.annotation.gtf: GENCODE annotations (Human Release 19) <br> (Source: GENCODE, https://www.gencodegenes.org/human/release_19.html) gencode.v34.annotation.gtf: GENCODE annotations (Human Release 34) <br> (Source: GENCODE, https://www.gencodegenes.org/human/release_34.html) condition.tcga.rds: a character vector of the conditions for each KIRC sample condition.yan.rds: a character vector of the conditions for each embryo sample junctionFilePaths.tcga.rds: a character vector of the junction file paths for each KIRC sample junctionFilePaths.yan.rds: a character vector of the junction file paths for each embryo sample promoterAnnotation.gencodev19.rds: promoter annotation object corresponding to GENCODE annotation (Human Release 19) promoterAnnotation.gencodev34.rds: promoter annotation object corresponding to GENCODE annotation (Human Release 34)
DOI: 10.25442/hku.14375372
title: Supporting data for "Constructing an Eco-Balanced Copyright Regime for Video Game Industry in the Chinese Context"

description: This dataset includes both quantitative data from self-administered questionnaire and qualitative data from in-depth interview. They are used to learn about game developers' and gamers' attitudes toward game Mods; and to evaluate whether live game streaming constitutes transformative use of the pre-existing game. My application for ethical approval was approved by the Human Research Ethics Committee on December 17, 2018. The reference number is EA1810039.
DOI: 10.25442/hku.14375372.v1
title: Supporting data for "Constructing an Eco-Balanced Copyright Regime for Video Game Industry in the Chinese Context"

description: This dataset includes both quantitative data from self-administered questionnaire and qualitative data from in-depth interview. They are used to learn about game developers' and gamers' attitudes toward game Mods; and to evaluate whether live game streaming constitutes transformative use of the pre-existing game. My application for ethical approval was approved by the Human Research Ethics Committee on December 17, 2018. The reference number is EA1810039.