cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.7k83g2g
title: Data from: Prevalence, risk factors, and impact of tungiasis in Kabembe and Kagogwa, Uganda

description: Tunga Penetrans, locally known as either the Jigger or Nvunza, is the smallest known flea. Female T. Penetrans burrow into the skin of a variety of mammalian hosts, including humans, causing tungiasis. This cross-sectional study took place in the villages of Kagogwa and Kabembe, where significant government and non-government organizational presence has occurred to reduce the impact of tungiasis on the community. However, despite removal clinics, spraying homes, and construction of new homes for some residents, the problem of tungiasis persists. Therefore, we conducted this study to support future decisions about eliminating tungiasis infections. Surveys were administered to 299 study participants by 3 research assistants proficient in all local languages. Prevalence of current infection in the villages of Kagogwa and Kabembe is 17% and prevalence of reporting a case in the previous two weeks is 45%. Tungiasis was more prevalent in children under 14 (67% of total cases) than adults. Risk factors included tending for chickens (OR = 11.42; 95% CI: 5.63 – 23.19), cohabiting with chickens OR = 3.63; 95% CI: 1.78 -7.39), and increased numbers of residents per sleeping room (exp(B) =1.27; 95% CI: 1.04 – 1.54). Protective factors included having floors of concrete (OR = 0.20 95% CI: 0.09 – 0.45) or dung smear (OR = 0.17; 95% CI: 0.07 – 0.39), household clear of organic waste (OR = 0.11; 95% CI: 0.05 – 0.22), frequency of bathing (exp(B) = 0.28; 95% CI: 0.16 – 0.48), level of education achieved (exp(B) = 0.89; 95% CI: 0.83 – 0.96), always wearing closed toed shoes (OR = 0.23; 95% CI: 0.11 – 0.49), keeping animals in a structure separate from the house (OR = 0.22; 95% CI: 0.10 – 0.49), and pit disposal of rubbish (OR = 0.19; 95% CI: 0.04 – 0.86). Future work should be done to develop and prove safe and inexpensive treatment and prevention methods.
description: FinalData - DataDryadSubOriginally collected in the Busoga region of Uganda using Questionnaires. Many columns contain data as 1 or empty where 1 indicates a positive response. The columns beginning with "Cause" indicate free form responses for respondent's perceived causes. The same idea holds true for "Treatment", "Prevention," and "Tend. There are several columns with negative identifiers such as "Lazy" or "Alcoholic" which are negative perceptions expressed about persons with jiggers.
DOI: 10.6084/m9.figshare.7488788.v1
title: mapping file

description: metadata
DOI: 10.6084/m9.figshare.8159960
title: output_datafile

description: output from https://github.com/KyleTDavid/OrthologConjecture2019/blob/master/branch_model.py<br>Column Headers (from left to right):tree IDtree likelihoodspeciation (S) or duplication (D)most recent common ancestor age (mya)branch length of first branch dN of first branchdS of first branchdN/dS of first branchtip labels (Ensembl protein IDs) descending from first branchbranch length of second branch dN of second branchdS of second branchdN/dS of second branchtip labels (Ensembl protein IDs) descending from second branchdelta omega
DOI: 10.6084/m9.figshare.7836158.v1
title: Social distance uncertain decision making

description: Many factors influence uncertain decision-making; among those, the effect of social distance is conflicting. This investigation explores how social distance influences uncertain decision-making by recording event-related potentials of fifty-seven healthy subjects (36 female) in the Iowa Gambling Task when they gambled for three quantified social distances (self, friend and stranger). Three stages of uncertain decision-making were analyzed. Behavioural results showed high social distance made people more desirable consequences approaching and undesirable consequences avoiding than low social distance. P300 in choice evaluation stage, which reflects stimulus discrimination, directly proved this result, gambling for a stranger caused higher P300 when evaluating advantageous deck and lower P300 when evaluating disadvantageous deck. Decision preceding negativity in response selection stage, which represents the anticipation of risky choices, was larger in high social distance when choosing disadvantageous decks. Feedback-related negativity and feedback-related P300, which were motivational significant, showed smaller amplitudes when gambling for a stranger. Results suggest that social distance works differently in the distinct stages of uncertain decision-making.
DOI: 10.6084/m9.figshare.8187086.v1
title: trio_potential_denovos_629M.vcf.gz

description: Sites passing all filters where an alternative allele was observed in individual YNPID 629M and not in its parents.
DOI: 10.6084/m9.figshare.8190887.v1
title: Waitrose_Stock Movement

description: Waitrose stock movement
DOI: 10.12751/g-node.91a992
title: Similar Changes in Executive function after Moderate Resistance Training and Loadless MovementD

description: Data from study that examined and compared acute changes in executive function after resistance training and a loadless movement control among young, healthy adults.
DOI: 10.12751/g-node.b8a1f8
title: Mouse ephys data associated with the paper *Neural Correlates of Anesthesia in Newborn Mice and Humans*

description: Electrophysiological recordings from prefrontal cortex and hippocampus CA1 area of 35 postnatal day 8-10 mice: - 19 mice without anesthesia (15 minutes) and bolus urethane anesthesia (45 minutes) - 16 mice without anesthesia (15 minutes) and isoflurane anesthesia (1-2-3%, 15 minutes each gradually increasing, for a total of 45 minutes)
description: IsSupplementTo: Chini M, Gretenkord S, Kostka JK, Pöpplau JA, Cornelissen L, Berde CB, Hanganu-Opatz IL and Bitzenhofer SH (2019) Neural Correlates of Anesthesia in Newborn Mice and Humans. Front. Neural Circuits 13:38. doi: 10.3389/fncir.2019.00038
DOI: 10.13012/b2idb-0873454_v1
title: US books 1931 to 1933 All Parts Transcription from Vendor

description: Vendor transcription of the Catalogue of Copyright Entries, Part 1, Group 1, Books: New Series, Volume 29 for the Year 1932. This file contains all of the entries from the indicated volume.
DOI: 10.13012/b2idb-9837167_v1
title: Words_Selected_by_Information_Gain

description: File Name: WordsSelectedByInformationGain.csv 
Data Preparation: Xiaoru Dong, Linh Hoang 
Date of Preparation: 2018-12-12 
Data Contributions: Jingyi Xie, Xiaoru Dong, Linh Hoang 
Data Source: Cochrane systematic reviews published up to January 3, 2018 by 52 different Cochrane groups in 8 Cochrane group networks. 
Associated Manuscript authors: Xiaoru Dong, Jingyi Xie, Linh Hoang, and Jodi Schneider. 
Associated Manuscript, Working title: Machine classification of inclusion criteria from Cochrane systematic reviews.

Description: the file contains a list of 1655 informative words selected by applying information gain feature selection strategy. 
Information gain is one of the methods commonly used for feature selection, which tells us how many bits of information the presence of the word are helpful for us to predict the classes, and can be computed in a specific formula [Jurafsky D, Martin JH. Speech and language processing. London: Pearson; 2014 Dec 30].We ran Information Gain feature selection on Weka -- a machine learning tool. 

Notes: In order to reproduce the data in this file, please get the code of the project published on GitHub at: https://github.com/XiaoruDong/InclusionCriteria and run the code following the instruction provided.
DOI: 10.21942/uva.7588919
title: Statistics

description: RDM file with the statistical analysis performed on the DGS and RSL data for the project "Body-anchored verbs and argument omission in two sign languages".
DOI: 10.25678/000150
title: Data for: Scalable Flood Level Trend Monitoring with Surveillance Cameras using a Deep Convolutional Neural Network [Version 2]

description: This package provides material that can be openly published for the paper "Scalable Flood Level Trend Monitoring with Surveillance Cameras using a Deep Convolutional Neural Network". It consists in the code used to generate results and figures as well as the weights of the deep convolutional neural networks trained to segment water in the surveillance camera images.
DOI: 10.6084/m9.figshare.8174546
title: dataset.xlsx

description: In the dataset one may find data on PM2.5 emissions and public policy expenditures on environement. Contry 1 is Belgium, 2 - Czech Republic, 3 - Denmark, 4 - Germany, 5 - Estonia, 6 - Ireland, 7- Greece, 8 - Spain, 9- France, 10 - Italy, 11 - Cyprus, 12- Latvia, 13- Lithuania, 14- Luxembourg, 15 - Hungary, 16- Malta, 17- Netherlands, 18- Austria, 19 - Poland, 20 - Portugal, 21 - Slovenia, 22- Slovakia, 23 - Finland, 24 - Sweden, 25- United Kingdom <br>
DOI: 10.6084/m9.figshare.8187059
title: trio_filtered_variants_570M.vcf.gz

description: Called variants passing all filters found in the individual 570M and his parents.<br>
DOI: 10.6084/m9.figshare.8187062
title: trio_filtered_variants_629M.vcf.gz

description: Called variants passing all filters found in the individual 629M and his parents.
DOI: 10.6084/m9.figshare.8187080
title: trio_potential_denovos_645F.vcf.gz

description: Sites passing all filters where an alternative allele was observed in individual YNPID 645F and not in its parents.
DOI: 10.6084/m9.figshare.8187083
title: trio_potential_denovos_694F.vcf.gz

description: Sites passing all filters where an alternative allele was observed in individual YNPID 694F and not in its parents.
DOI: 10.6084/m9.figshare.8187086
title: trio_potential_denovos_629M.vcf.gz

description: Sites passing all filters where an alternative allele was observed in individual YNPID 629M and not in its parents.
DOI: 10.6084/m9.figshare.8187092
title: trio_potential_denovos_570M.vcf.gz

description: Sites passing all filters where an alternative allele was observed in individual YNPID 570M and not in its parents.<br>
DOI: 10.6084/m9.figshare.8197724
title: HPLC-MS/MS boundary data.mzXML

description: Different reported secondary metabolites were produced significantly when boundary formed as compared to the both controls (DK1622-DK1622 and Δ<i>MXAN_0049- </i>Δ<i>MXAN_0049</i>).
DOI: 10.12751/g-node.e02d8a
title: Ventral pallidum single-unit recordings from rats performing cue-induced alcohol or sucrose seeking

description: This is a dataset from our European Journal of Neuroscience paper "Recruitment and disruption of ventral pallidal cue encoding during alcohol seeking." It contains in vivo single unit data recorded with electrode bundles in ventral pallidum as well as the corresponding behavioral data from rats responding to auditory cues that were paired with alcohol or sucrose delivery via Pavlovian or instrumental conditioning. It also contains the code to analyze the data and produce the figures from our paper.
description: IsSupplementTo: Recruitment and disruption of ventral pallidal cue encoding during alcohol seeking. Journal of Neuroscience.
DOI: 10.25386/genetics.7811645.v1
title: Supplemental Material for Christopher et al., 2019

description: All datasets and code used to generate figures in manuscript submitted for peer review: "Quantifying microsatellite mutation rates from intestinal stem cell dynamics in Msh2-deficient murine epithelium"
DOI: 10.6084/m9.figshare.7503878.v1
title: TBS final database for PLOS ONE

description: Trabecular bone score for PLOS ONE
DOI: 10.6084/m9.figshare.7886567.v1
title: Data_set_kalinski.xlsx

description: Dataset for the experiment on microbial load on nests and great tit nestlings.<br>
DOI: 10.6084/m9.figshare.8187065.v1
title: trio_filtered_variants_645F.vcf.gz

description: Called variants passing all filters found in the individual 645F and his parents.
DOI: 10.6084/m9.figshare.8187083.v1
title: trio_potential_denovos_694F.vcf.gz

description: Sites passing all filters where an alternative allele was observed in individual YNPID 694F and not in its parents.
DOI: 10.6084/m9.figshare.9114722
title: Clinical impairment scores and sagittal plane kinematics of children with cerebral palsy

description: These files accompany the article entitled "Are spasticity, weakness, selectivity, and passive range of motion related to gait deviations in children with spastic cerebral palsy? A statistical parametric mapping study" with DOI:10.1371/journal.pone.0223363. They contain retrospective data, acquired through the Clinical Motion Analysis Laboratory of the University Hospitals Leuven (Medical Ethical Committee of University Hospitals Leuven - s56036). This research project provided permission to use retrospective patient data that have been acquired during standard medical care, under the condition that all data would have been anonymized a priori, unless the patients had specifically asked to not be included in any study. Two different datasets are included from: a) children with unilateral cerebral palsy (uCP - n=167) and b) bilateral cerebral palsy (bCP - n=200). These datasets contain clinical impairment scores of spasticity, weakness, selectivity and passive range of motion measured at the level of the hip, knee and ankle joints for muscles acting in the sagittal plane, as well as the sagittal plane kinematic curves of these patients (i.e. pelvis, hip, knee and ankle joint motions). The impairment scores were inspected at a total level (i.e. composite scores, as sum of all individual impairments) or at a joint level. Statistical non-parametric mapping was used to assess: a) the relationships between the composite impairment scores and the vector of the four joints, as well as the individual joint motions and b) the relationships between the joint impairment scores and the individual joint motions. All analyses were performed separately for children with uCP and bCP. <br>
DOI: 10.13012/b2idb-2501832_v1
title: Wisconsin Bobcat Harvest Data

description: This dataset includes the data from an analysis of bobcat harvest data with particular focus on the relationship between catch-per-unit-effort and population size. The data relate to bobcat trapper and hunter harvest metrics from Wisconsin and include two RDS files which can be open in the software R using the readRDS() function.
DOI: 10.13012/b2idb-5075871_v1
title: All_Words

description: File Name: AllWords.csv
Data Preparation: Xiaoru Dong, Linh Hoang
Date of Preparation: 2018-12-12
Data Contributions: Jingyi Xie, Xiaoru Dong, Linh Hoang
Data Source: Cochrane systematic reviews published up to January 3, 2018 by 52 different Cochrane groups in 8 Cochrane group networks.
Associated Manuscript authors: Xiaoru Dong, Jingyi Xie, Linh Hoang, and Jodi Schneider.
Associated Manuscript, Working title: Machine classification of inclusion criteria from Cochrane systematic reviews.

Description: The file contains lists of all words (all features) from the bag-of-words feature extraction. 

Notes: In order to reproduce the data in this file, please get the code of the project published on GitHub at: https://github.com/XiaoruDong/InclusionCriteria and run the code following the instruction provided.
DOI: 10.21942/uva.7588886
title: RSL data

description: This file contains annotations created by Vadim Kimmelman in ELAN linguistic annotator to accompany video files from the on-line corpus of RSL (corresponding files are indicated in the File column), which features Russian Sign Language signers. Annotations include information about properties of verbs and their arguments. The RSL corpus videos, plus annotations of sign language glosses and translations, are accessible via http://rsl.nstu.ru/ after registration.
DOI: 10.23645/epacomptox.6062629.v5
title: ToxCast Database (invitroDB) ReadMe

description: ReadMe for ToxCast high-throughput assay information including assay annotation user guide, assay target information, study design information and quality statistics on the assays.
DOI: 10.25678/0000ff
title: Data for: Evaluation of Phototrophic Stream Biofilms Under Stress: Comparing Traditional and Novel Ecotoxicological Endpoints After Exposure to Diuron

description: Stream biofilms have been shown to be among the most sensitive indicators of environmental stress in aquatic ecosystems and several endpoints have been developed to measure biofilm adverse effects caused by environmental stressors. Here, we compare the effects of long-term exposure of stream biofilms to diuron, a commonly used herbicide, on several traditional ecotoxicological endpoints (biomass growth, photosynthetic efficiency, chlorophyll-a content, and taxonomic composition), with the effects measured by recently developed methods [community structure assessed by flow cytometry (FC-CS) and measurement of extracellular polymeric substances (EPS)]. Biofilms grown from local stream water in recirculating microcosms were exposed to a constant concentration of 20 μg/L diuron over a period of 3 weeks. During the experiment, we observed temporal variation in photosynthetic efficiency, biomass, cell size, presence of decaying cells and in the EPS protein fraction. While biomass growth, photosynthetic efficiency, and chlorophyll-a content were treatment independent, the effects of diuron were detectable with both FC and EPS measurements. This demonstrates that, at least for our experimental setup, a combination of different ecotoxicological endpoints can be important for evaluating biofilm environmental stress and suggests that the more recent ecotoxicological endpoints (FC-CS, EPS protein content and humic substances) can be a useful addition for stream biofilm ecotoxicological assessment.
DOI: 10.6084/m9.figshare.7503878
title: TBS final database for PLOS ONE

description: Trabecular bone score for PLOS ONE
DOI: 10.6084/m9.figshare.8187062.v1
title: trio_filtered_variants_629M.vcf.gz

description: Called variants passing all filters found in the individual 629M and his parents.
DOI: 10.6084/m9.figshare.8187065
title: trio_filtered_variants_645F.vcf.gz

description: Called variants passing all filters found in the individual 645F and his parents.
DOI: 10.6084/m9.figshare.8187068.v1
title: trio_filtered_variants_694M.vcf.gz

description: Called variants passing all filters found in the individual 694M and his parents.
DOI: 10.6084/m9.figshare.8187080.v1
title: trio_potential_denovos_645F.vcf.gz

description: Sites passing all filters where an alternative allele was observed in individual YNPID 645F and not in its parents.
DOI: 10.6084/m9.figshare.8188667
title: Supplemental Data S1-S3 and S26-S37 (i.e., Student and Professor Survey Questions and Results as well as statistical analyses of the data).

description: Questions and Results resulting from the Game testing
DOI: 10.6084/m9.figshare.8188745
title: Table_S3.xlsx

description: <b>Appendix
Table S3</b>.<b> </b>Extended results of the identification of ecological clusters. RF
indicates random forest analysis; PC indicates semi-partial correlations. Geographical
distance, east longitude; Ele, elevation; MAP, mean annual precipitation; MAT,
mean annual temperature; SWC, soil water content; AI, aridity index; G, plant
diversity; TP, total phosphorus; SOC, soil organic carbon; TN, total nitrogen;
soil pH and NDVI.
DOI: 10.6084/m9.figshare.8190887
title: Waitrose_Stock Movement

description: Waitrose stock movement
DOI: 10.6084/m9.figshare.9114806.v1
title: clinical impact matched ref charity fund

description: clinical impact matched references from a swedish charity fund
DOI: 10.6084/m9.figshare.9114815
title: clinical impact scottish hospital cites by year

description: clinical impact scottish hospital cites by year
DOI: 10.6084/m9.figshare.9114839
title: WoS charity fund cites 09-18

description: WoS charity fund cites 09-18
DOI: 10.21942/uva.8982410.v1
title: Craving VE Manipulation

description: Data are from VE manipulation on craving changes, investigated for cigarette / tobacco craving
DOI: 10.25386/genetics.7811645.v2
title: Supplemental Material for Christopher et al., 2019

description: All datasets and code used to generate figures in manuscript submitted for peer review: "Quantifying microsatellite mutation rates from intestinal stem cell dynamics in Msh2-deficient murine epithelium"
DOI: 10.25678/0000ee
title: Data for: Flow cytometry combined with viSNE for the analysis of microbial biofilms and detection of microplastics

description: Biofilms serve essential ecosystem functions and are used in different technical applications. Studies from stream ecology and waste water treatment have shown that biofilm functionality depends to a great extent on community structure. Here we present a fast and easy-to-use method for individual cell-based analysis of stream biofilms, based on stain-free flow cytometry and visualization of the high-dimensional data by viSNE. The method allows the combined assessment of community structure, decay of phototrophic organisms and presence of abiotic particles. In laboratory experiments, it allows quantification of cellular decay and detection of survival of larger cells after temperature stress, while in the field it enables detection of community structure changes that correlate with known environmental drivers (flow conditions, dissolved organic carbonDOC, calcium) and detection of microplastic contamination. The method can potentially be applied to other biofilm types, e.g. for inferring community structure for environmental and industrial research and monitoring.
DOI: 10.6084/m9.figshare.8187059.v1
title: trio_filtered_variants_570M.vcf.gz

description: Called variants passing all filters found in the individual 570M and his parents.<br>
DOI: 10.6084/m9.figshare.8187068
title: trio_filtered_variants_694M.vcf.gz

description: Called variants passing all filters found in the individual 694M and his parents.
DOI: 10.6084/m9.figshare.8187092.v1
title: trio_potential_denovos_570M.vcf.gz

description: Sites passing all filters where an alternative allele was observed in individual YNPID 570M and not in its parents.<br>
DOI: 10.6084/m9.figshare.8197724.v1
title: HPLC-MS/MS boundary data.mzXML

description: Different reported secondary metabolites were produced significantly when boundary formed as compared to the both controls (DK1622-DK1622 and Δ<i>MXAN_0049- </i>Δ<i>MXAN_0049</i>).
DOI: 10.6084/m9.figshare.9114794
title: clinical impact charity fund cites by year

description: clinical impact charity fund cites by year
DOI: 10.6084/m9.figshare.9114815.v1
title: clinical impact scottish hospital cites by year

description: clinical impact scottish hospital cites by year
DOI: 10.6084/m9.figshare.9114851.v1
title: WoS scottish hospital cites 2004

description: WoS scottish hospital cites 2004
DOI: 10.6084/m9.figshare.9114878.v1
title: WoS scottish hospital cites 2008

description: WoS scottish hospital cites 2008
DOI: 10.6084/m9.figshare.9114878.v2
title: WoS scottish hospital cites 2008

description: WoS scottish hospital cites 2008
DOI: 10.6084/m9.figshare.9119045
title: PERSEPSI PEMENUHAN KEBUTUHAN SEKSUALITAS PADA PASIEN POST MIOKARD INFARK

description: Analisa data kualitatif pada penelitian persepsi pemenuhan kebutuhan seksual pada pasien post miokard infark. data diambil dari proses indeep interview dengan partisipan.
DOI: 10.6084/m9.figshare.9121901
title: pik3ca data.csv

description: this hospital based cross-sectional study conducted among Sudanese women with ovarian cancer <br><br>
DOI: 10.21942/uva.7588847
title: DGS data

description: This file contains annotations created by Marloes Oomen in ELAN linguistic annotator to accompany video files from the DGS Corpus (corresponding files are indicated in the File column), which features German Sign Language signers in dialogue. Annotations include information about properties of verbs and their arguments. The DGS Corpus videos, plus annotations of sign language glosses and translations, are freely accessible via ling.meine-dgs.de.
DOI: 10.21942/uva.8982410
title: Craving VE Manipulation

description: Data are from VE manipulation on craving changes, investigated for cigarette / tobacco craving
DOI: 10.22021/bbldntz201909
title: The Linked Open British National Bibliography – Books. 1950/2019-09 – N-Triples