cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13424414.v2
title: Intense light as anticoagulant therapy in humans

description: Blood coagulation is central to myocardial ischemia and reperfusion (IR) injury. Studies on the light elicited circadian rhythm protein Period 2 (PER2) using whole body <i>Per2<sup>-/-</sup></i> mice found deficient platelet function and reduced clotting which would be expected to protect from myocardial IR-injury. In contrast, intense light induction of PER2 protected from myocardial IR-injury while <i>Per2</i> deficiency was detrimental. Based on these conflicting data, we sought to evaluate the role of platelet specific PER2 in coagulation and myocardial ischemia and reperfusion injury. We demonstrated that platelets from mice with tissue-specific deletion of <i>Per2</i> in the megakaryocyte lineage (<i>Per2<sup>loxP/loxP</sup></i>-PF4-CRE) significantly clot faster than platelets from control mice. We further found increases in infarct sizes or plasma troponin levels in <i>Per2<sup>loxP/loxP</sup></i>-PF4-CRE mice when compared to controls. As intense light increases PER2 protein in human tissues, we also performed translational studies and tested the effects of intense light therapy on coagulation in healthy human subjects. Our human studies revealed that intense light therapy repressed procoagulant pathways in human plasma samples and significantly reduced the clot rate. Based on these results we conclude that intense light elicited PER2 has an inhibitory function on platelet aggregation in mice. Further, we suggest intense light as a novel therapy to prevent or treat clotting in a clinical setting.
DOI: 10.6084/m9.figshare.1501103.v1
title: Human Synthetic Lethal Predictions (1/3)

description: This is file 1/3 containing all filtered human predictions of synthetic lethality using the SINaTRA algorithm. Files are GZipped, tab-delimited text files with the following columns: Gene_ID_1/Gene_ID_2/SINaTRA_Score
DOI: 10.6084/m9.figshare.28091537.v1
title: Supplementary information

description: Supplementary information
DOI: 10.6084/m9.figshare.5558641.v1
title: Genome sequences of candidate wheat blast biocontrol bacteria

description: In an effort to combat wheat blast disease in Bangladesh, Prof. Tofazzal Islam and team have identified several biocontrol bacteria that have the ability to inhibit fungal growth in wheat (Surovy et al., 2017). They have isolated a number of these agents and we have sequenced the genomes of four bacterial strains to 30x coverage. The genome sequence data is now available to download from links in the tables included in the document.<br>
DOI: 10.60893/figshare.apm.27236529.v1
title: Supplemental information

description: Supplemental information
DOI: 10.17605/osf.io/dwh98
title: Open Data Project on Global Endogenous Climate Adaptation (DatAdapt)

description: Code and data delivering a global dataset supporting the refinement, calibration, and validation of a dynamic intertemporal model of endogenous climate adaptation.
DOI: 10.17632/kp59tgkd6h
title: PERSYS—A program for the solution near the origin of coupled channel Schrödinger equation with singular potential

description: Abstract The code PERSYS produces the regular solution of a system of coupled Schrödinger equations near the origin, where the potential exhibits a singularity, due to the centrifugal, spin-orbit and Coulomb components. The solution is calculated by means of a highly accurate method, which consists of a perturbative technique in which the centrifugal term is taken as the reference potential while the rest of terms are seen as a perturbation. Title of program: PERSYS Catalogue Id: ADPI_v1_0 Nature of problem Problems which involve the integration of the coupled channel Schrodinger equation and when the singularities of the potential near the origin causes difficulties. Such problems appear, for example, in the determination of Gamow states in a deformed potential which are solutions regular at the origin and, asymptotically, of outgoing wave form, Ol = Gl + iFl, where Gl and Fl are the irregular and regular Coulomb wave functions. Versions of this program held in the CPC repository in Mendeley Data ADPI_v1_0; PERSYS; 10.1016/S0010-4655(01)00429-5 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/mk3xhprm6j
title: FOS: A fully integrated open-source program for Fast Optical Spectrum calculations of nanoparticle media

description: FOS, which means light in Greek, is an open-source program for Fast Optical Spectrum calculations of nanoparticle media. This program takes the material properties and a description of the system as input, and outputs the spectral response including the reflectance, absorptance, and transmittance. Previous open-source codes often include only one portion of what is needed to calculate the spectral response of a nanoparticulate medium, such as Mie theory or a Monte Carlo method. FOS is designed to provide a convenient fully integrated format to remove the barrier as well as providing a significantly accelerated implementation with compiled Python code, parallel processing, and pre-trained machine learning predictions. This program can accelerate optimization and high throughput design of optical properties of nanoparticle or nanocomposite media, such as radiative cooling paint and solar heating liquids, allowing for the discovery of new materials and designs. FOS also enables convenient modeling of lunar dust coatings, combustion particulates, and many other particulate systems. In this paper we discuss the methodology used in FOS, features of the program, and provide four case studies.
DOI: 10.6084/m9.figshare.29099777.v1
title: Адміністративна відповідальність: поняття й ознаки

description: Наукові тези на тему: "Адміністративна відповідальність: поняття й ознаки"
DOI: 10.17632/cft59yjwfp
title: Desert Kites and Stone Circles (with .kml file)

description: An arid land, known as the Syrian Desert, is covering a large part of the Middle East. This harsh environment is characterized by huge lava fields, the “harraat”. If we observe them from space, we discover that they are crossed by some stone structures, the “desert kites”, which were the Neolithic traps for the game. Several stone circles, with radial structure inside, are visible too, as many "Stonehenge" dispersed in the desert landscape. Like the famous English site, some of them could have been used as ancient solar observatories. We can analyze their orientations with sunrise and sunset directions, using a freely available software which works on satellite maps, to determine if some alignments exist. In this dataset the reader can find a .kml file with the position of some 'kites' and stone circles. In a folder, some images from ACME Mapper are given of these prehistoric structures. Some .pdf file are also added, where the reader can find supplementary information.
DOI: 10.6084/m9.figshare.17372505.v1
title: Supplementary Material 2 - Rmarkdown from Development and function explain the modular evolution of phalanges in gecko lizards

description: Rmarkdown with codes used for analyses performed in R environment
DOI: 10.6084/m9.figshare.27281280.v1
title: Flood impacts to reef fish dataset

description: Reef fish data recorded using baited remote underwater video systems.
DOI: 10.26180/5d6e10736bed4
title: SNP dataset for the springtail Tullbergia bisetosa

description: Dataset of 5680 genome-wide Single Nucleotide Polymorphisms for the springtail <i>Tullbergia bisetosa </i>in VCF format. An excel spreadsheet with associated metadata (sample collection details) is also supplied. The SNPs were generated at Diversity Arrays Technology (Canberra, Australia) using reduced representation next-generation sequencing, and subsequently quality filtered according to the methods outlined in the associated manuscript: Baird, H.P., Moon, K.L., Janion-Scheepers, C. & Chown, S.L. (2020) Springtail phylogeography highlights biosecurity risks of repeated invasions and intraregional transfers among remote islands. <i>Evolutionary Applications,</i> doi:10.1111/eva.12913
DOI: 10.6084/m9.figshare.1435979.v1
title: motor imagery and reflective thinking in sleep onset, non-REM, and REM sleep

description: Motor imagery and reflective thinking as measured by quantitative linguistic motor agency, and cognitive agency analyise of sleep onset, non-REM, and REM sleep reports.
DOI: 10.6084/m9.figshare.26802160.v6
title: Data collected for the project titled <i>The Relationship Between Moral Superiority Bias and Ethical Decision-Making Frameworks</i>

description: A tendency for people to rate themselves as ‘more moral’ than the ‘average person’ – known as the Moral Superiority Bias (MSB) – is a common characteristic of members in extremist political groups, and thus may contribute to political and social hostility. Despite this, the factors underpinning individual differences in MSB are not yet known. Identifying links between MSB and more established bodies of literature in moral psychology, such as individual differences between people who make utilitarian vs. deontologically-guided ethical decisions, may provide further insight into MSB. Eighty-nine (19 male, 70 female) 1st-year Psychology students from [institution name redacted] completed measures of MSB and ethical decision-making style. Correlational analyses revealed that participants whose moral decision making was more strongly guided by utilitarian arguments exhibited lower levels of MSB. Participants who scored highly in deontological moral thinking did not display higher levels of MSB, but did show low self-ratings of moral character. The findings suggest that moral framework is not a relevant factor for understanding the MSB seen in extremist political groups. Other potential avenues of research towards building our understanding of MSB are discussed.
DOI: 10.6084/m9.figshare.28045685.v1
title: Data of Cabralea canjerana subsp polytricha (male and female plants)

description: Data of Cabralea canjerana subsp polytricha (male and female plants) - plant size, inflorescence number and size, size of floral parts, number of pollen, and nectar data. All data are in Excel. Data were collected from<i> </i>June to January 2016 and August to December 2017 in the <i>Clube de Caça</i> e <i>Pesca Itororó</i> located in the municipality of Uberlândia, Minas Gerais State, Brazil (18°55’23” S e 48°17’19” W) and the <i>Rio Preto</i> State Park located in the municipality of São Gonçalo do Rio Preto, Minas Gerais State, Brazil (18°05'28.3"S, 43°20'29.2"W).
DOI: 10.6084/m9.figshare.29002511.v2
title: 2.8. Z Cronbach's Alpha Pre-test (Output Data) - Doomscrolling and Information Overload on Generation Z: Examining the Link Between Excessive Digital Media Consumption and Stress Level

description: Pre-test analysis Z variable (stress level) results using IBM SPSS Statistics 26 for research title "Doomscrolling and Information Overload on Generation Z: Examining the Link Between Excessive Digital Media Consumption and Stress Level".
DOI: 10.17632/fjxt6cjptn
title: Classification of Extremity Movements by Visual Observation of Signal Transforms

description: A low-cost quantitative continuous measurement of movements in the extremities of people with Parkinson's disease (PD) (McKay, 2019) provides the means to express the dysfunction of movements commonly seen in people with PD in the form of the signals of instrumentation capturing the three-dimensional position in space of the extremities during movements. The goal of the current protocol is to provide the means to obtain objective assessments of the signals and transforms of the output of our low-cost quantitative continuous measurement of movements in the extremities of people with PD (McKay, 2019; Harrigan, 2020). To attain this end, we sought to develop a method for 35 experts to blindly rate the signals and transforms of our quantitative continuous measurement of movements in the extremities of cohorts of people with PD and control and comparison groups (McKay, 2019; Harrigan, 2020; Ziegelman, 2020).

Thus, we conducted an investigation to apply our accelerometry-based method for the acquisition of motion data for the twelve tasks (McKay, 2019) on 20 patients with PD, one patient with multiple system atrophy (MSA), and 8 healthy age- and sex-matched healthy individuals with typical development (TD). The original output from the instrumentation was stored on the laptop used for the study. Subsequent analysis has been restricted to the five repetitive tasks (3.4 Finger tapping, 3.5 Hand movements, 3.6 Pronation-supination movements of hands, 3.7 Toe tapping, 3.8 Leg agility) (Ziegelman 2021). The signals and the fast Fourier transforms (FFTs) and continuous wavelet transforms (CWTs) of the signals of the five repetitive items have been published (Harrigan 2020, 2022). We sought to develop a protocol to express the signals and the transforms of the five repetitive movements of each of the cohorts in a format suitable for blind rating by experts unfamiliar with the original data.

In order to verify that each rater was qualified to participate as a rater, potential raters participated in weekly online research team meetings including instruction by a biomedical engineer and a mechanical engineer in the expression of output signals as FFTs and CWTs. Raters were asked to perform ratings independently without consultation with others. Because the research team of expert raters included people throughout the world, raters were allowed to view the images as long as they wanted. They were allowed to change ratings. They could take as much time as they wanted to complete and submit each set of ratings. 

The overall scheme of the and retest is presented in the attach Form-Link Master Sheet. Examples of the images on the panels for the participant with MSA (1960, 2352, 2822, and 3386) presented to the raters are provided to illustrate that part of the rating procedure. Raters were additionally provided a score sheet below each image panel to rate the presence or absence of deviations from a uniform rhythm (Hernandez, et al., MethodsX 2022; 9: 101739).
DOI: 10.17632/jfbp52dmv7
title: Good and bad classification of Betel leaf (Piper Betel)

description: ## Data Description for Good and Bad Classification of Betel Leaf (Piper Betel)

### Introduction
The dataset comprises 1000 samples of Marsh Barbel Leaves, specifically of the Betel leaf (Piper Betel) variety. This dataset is evenly divided into two categories: 500 good samples and 500 bad samples. The goal of this project is to develop a classification model that can accurately distinguish between good and bad Betel leaves based on the provided features.

### Dataset Composition
1. *Total Samples*: 1000
 - *Good Samples*: 500
 - *Bad Samples*: 500

### Features
The dataset includes various features that are crucial for determining the quality of Betel leaves. These features can be broadly categorized into visual, physical, and chemical characteristics. Below is a detailed description of the features included:

1. *Visual Characteristics*
 - *Color*: The RGB values representing the color of the leaf.
 - *Texture*: Numerical representation of the leaf's texture, obtained through image processing techniques.
 - *Shape*: Features related to the shape, such as area, perimeter, and aspect ratio.
 - *Defects*: Binary or categorical indicators of visual defects like spots, discoloration, or holes.

2. *Physical Characteristics*
 - *Size*: Measured dimensions of the leaf, such as length and width.
 - *Weight*: The mass of the leaf, recorded in grams.

3. *Chemical Characteristics*
 - *Moisture Content*: Percentage of water content in the leaf.
 - *Chlorophyll Level*: Measured chlorophyll content, indicating the leaf's health.
 - *Nutrient Levels*: Concentration of essential nutrients like nitrogen, phosphorus, and potassium.

### Data Collection
The data has been collected from various sources, including agricultural research centers, farms, and markets. Each sample has been meticulously labeled by experts to ensure accuracy. Advanced imaging techniques and sensors were employed to capture the visual and physical characteristics, while laboratory analyses were conducted to determine the chemical properties.

### Data Format
The dataset is provided in a tabular format, with each row representing a single leaf sample. The columns correspond to the different features and the label (good or bad). Below is a sample structure of the dataset:

| Sample ID | Color_R | Color_G | Color_B | Texture | Shape_Area | Shape_Perimeter | Shape_Aspect_Ratio | Defects | Length | Width | Weight | Moisture_Content | Chlorophyll_Level | Nitrogen_Level | Phosphorus_Level | Potassium_Level | Label |
|-----------|---------|---------|---------|---------|-------------|-------

### Usage
This dataset is intended for use in developing machine learning models for the classification of Betel leaves. Researchers and developers can employ various algorithms, such as decision trees, support vector machines, or neural networks, to train and validate models. The balanced nature of the dataset ensures that models can be trained without bias towards any particular class
DOI: 10.6084/m9.figshare.25855975.v1
title: SPSS Daten Sektion.sav

description: International survey of equine orthopaedic specialists reveals diverse treatment strategiesfor horses with overriding spinous processes
DOI: 10.6084/m9.figshare.4522760.v2
title: Longtime and Adult K-pop Fan Survey: Preliminary Data

description: 192 responses collected 9/9/2016 - 11/7/2016 in answer to the query: "Please list your bias (i.e. favorite) K-pop groups and solo artists and briefly explain why you like them."
DOI: 10.17632/m7kfwct7bc
title: Data for: Child Maltreatment and Depression: A Meta-Analysis

description: This is the datafile from all studies with contributing data to the meta-analysis.
DOI: 10.6084/m9.figshare.10308272.v1
title: Axlor data

description: The original micro-ct scans, the derived segmentation files, and 3D volumes from the fossils found in Axlor (Dima, Biscay, Norther Iberian Peninsula) during Barandiarán's excavations.These fossils are described by Gómez-Olivencia et al. American Journal of Physical Anthropology
DOI: 10.6084/m9.figshare.14256272.v1
title: Data availability for the global burned area trends study

description: <b>Data availability for the paper:</b>Wu et al. Historical and future global burned area with changing climate and human demography (2021).All raw data used to generate the figures and tables in the main text and Supplemental Information. If you have further questions, please contact Chao Wu (chaowu.thu@gmail.com).<br><b>Summary of this dataset</b>DATA: All raw data used to generate the Figures 1-5 in the main text and Figures 2-5, 8-12, and 14 in the Supplemental Information.This DATA includes the results for 34 ESMs, 1 offline, 8 sets of factorial analysis, and 1 demographic scenario, the result for the Amazon region, and the other files that help to generate the figures.Each ESM includes 4 scenarios (RCP2.6, 4.5, 6, and 8.5).Factorial analysis to investigate the dominant limiting factors based on 3 ESMs are shown in “test_driver_*”, each of that includes 6 scenarios: fixed temperature (“rcp6_tem”), precipitation (“rcp6_pre”), wind speed (“rcp6_wind”), population density (“rcp6_pop”), ratio of rural population to total population (“rcp6_rur”), and distance to cities (“rcp6_dis”).Factorial analysis to investigate the dominant drivers based on 3 ESMs are shown in “fac_*”, each of that includes 7 scenarios: varying temperature only (“rcp6_tem”), varying precipitation only (“rcp6_pre”), varying wind speed only (“rcp6_wind”), varying population density only (“rcp6_pop”), varying ratio of rural population to total population only (“rcp6_rur”), varying distance to cities only (“rcp6_dis”), and control (“rcp6”).“ssps_MIROC_ESM” includes all scenarios to generate Figure 3C.“fac_GISS_E2_R_CC” includes all scenarios to generate Figure 5.“test_driver_GISS_E2_R_CC” includes all scenarios to generate Figure S12.“amazon_MIROC_ESM” includes all scenarios to generate Figure S11.For each scenario, there is one global result "SEVERGlobe.out" and/or one gridcell-based result for annual burned area ("aburntarea.dat").Each column in "SEVERGlobe.out" represents “year”, "global annual burned area”, and “precipitation over land”.GFED4s product was accessed from http://www.globalfiredata.org/index.html; FireCCI51 product was accessed from https://geogra.uah.es/fire_cci/firecci51.php.The python code to interpret data and prepare the figures are available on request from the corresponding author.<br>
DOI: 10.6084/m9.figshare.20463798.v1
title: The genome of Tetraena mongolica

description: <strong>T_mongolica_genome.fa: </strong>Genome assembly file <strong>T_mongolica_genes.gff3: </strong>Gene annotation file <strong>T_mongolica_genes.gff3.cds: </strong> Coding sequences of protein-coding genes <strong>T_mongolica_genes.gff3.pep: </strong>Protein sequences of protein-coding genes
DOI: 10.60893/figshare.aml.27949902.v1
title: Supplementary Material

description: Time series data showing application of the neural network to a complete experimental series.
DOI: 10.5522/04/12162354.v3
title: Neuropixels recordings of retinal axons in mouse optic tract

description: These data contain activity (in form of action potentials) of single retinal axons recorded in the optic tract of mouse. Mice were able to run on rotating wheel. Running speed was recorded simultaneously. Mice were presented with full-field, drifting, sinusoidal gratings (“gratings”), darkness (“dark”), black and white squares on gray background (“noise”), or full-field screen inverting between black and white at fast rates ("flickers").<br>See Schröder et al. (2020) for details on methods (https://www.cell.com/neuron/fulltext/S0896-6273(20)30318-4).<br>See Optic tract ALF definitions.pdf for detailed description of data.
DOI: 10.6084/m9.figshare.24885393.v3
title: Genetic dataset

description: This dataset contains raw genetic data covering all diseases.
DOI: 10.6084/m9.figshare.26362300.v1
title: CARROT processed dataset

description: Processed datasets used in CARROT: Simultaneous Prediction of Anomalies from Groups of Correlated Cryptocurrency Trends for the experiments.
DOI: 10.6084/m9.figshare.4009692.v2
title: Survey of Project Characteristics in Software Engineering-Questions

description: Survey of Project Characteristics in Software Engineering
DOI: 10.17632/v2xwy689mn
title: Cardiometabolic factors related to post-COVID-19 conditions: a scoping review

description: The study aims to map, through a scoping review, the scientific evidence related to cardiometabolic factors in post-Covid-19 conditions.
DOI: 10.17632/5w7y4w7dct
title: Data for: Unraveling amazing structural features of a highly efficient "oxo-Co/phosphate" catalyst for water oxidation

description: F(R), FT-IR and Raman spectra included in the manuscript