cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.brwqkb
title: Occurrence Download

description: A dataset containing 17965 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is The Hemiptera collection (EH) of the Muséum national d'Histoire naturelle (MNHN - Paris)"
 ]
}

 The dataset includes 17965 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028867-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29053280
title: Methylation SRR5836474

description: Differential methylation
DOI: 10.15468/dl.85m4d5
title: Occurrence Download

description: A dataset containing 2178 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry MULTIPOLYGON(((21.275 45.79283,21.27538 45.80715,21.26961 45.82006,21.25825 45.83032,21.24241 45.8369,21.22365 45.83917,21.2038 45.8369,21.1848 45.83032,21.16853 45.82006,21.15657 45.80715,21.1501 45.79283,21.14974 45.77851,21.15553 45.7656,21.1669 45.75535,21.18273 45.74877,21.20148 45.74651,21.22131 45.74877,21.24028 45.75535,21.25655 45.7656,21.26851 45.77851,21.275 45.79283)))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2178 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028869-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d44ep6
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Morella pavonis (C.DC.) Parra-Os."
 ]
}

 The dataset includes 55 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028868-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8epufb
title: Occurrence Download

description: A dataset containing 198 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Browningia candelaris (Meyen) Britton & Rose"
 ]
}

 The dataset includes 198 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028870-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/iozq5w
title: Replication Data for: The Distribution of Doctor Quality: Evidence from Cardiologists in England

description: This is the replication package for "The Distribution of Doctor Quality: Evidence from Cardiologists in England", accepted in 2025 by the Journal of Political Economy: Microeconomics.
DOI: 10.15468/dl.36ty7r
title: Occurrence Download

description: A dataset containing 520652 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Branta bernicla (Linnaeus, 1758)",
 "Year is greater than or equal to 1950",
 {
 "or" : [
 "GadmGid is USA",
 "GadmGid is CAN",
 "GadmGid is MEX"
 ]
 }
 ]
}

 The dataset includes 520652 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028851-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29053283
title: Coverage SRR5836474

description: Differential methylation
DOI: 10.15468/dl.5udhhn
title: Occurrence Download

description: A dataset containing 395 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sceloporus omiltemanus Günther, 1890"
 ]
}

 The dataset includes 395 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028871-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y6w4pg
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Asia",
 "Country is China",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is CC-BY-NC 4.0",
 "OccurrenceStatus is Present",
 "TaxonKey is Ailuropoda melanoleuca (David, 1869)",
 "Year 2014-2025"
 ]
}

 The dataset includes 19 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028872-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gh64xh
title: Occurrence Download

description: A dataset containing 6507 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prumnopitys taxifolia (Banks & Sol. ex D.Don) de Laub."
 ]
}

 The dataset includes 6507 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028873-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jfks6h
title: Occurrence Download

description: A dataset containing 156 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polylepis rugulosa Bitter"
 ]
}

 The dataset includes 156 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028874-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.49zdzg
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sceloporus palaciosi Lara-Gongora, 1983"
 ]
}

 The dataset includes 154 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028875-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60521/331197
title: LIS Phase II seafloor mapping: Bathymetry grids (GeoTIFF format), eastern Long Island Sound (2017-18)

description: Seafloor bathymetry provides important information on water depth and on the character of features on the seafloor to improve our understanding of benthic habitat. Multibeam sonar data was collected in 2017-2018 during field surveys by SoMAS, Stony Brook University, in eastern Long Island Sound as part of the Phase 2 of the Long Island Sound Cable Fund Benthic Habitat Mapping Project. The bathymetry grids in this data set are in GeoTIFF grid format and cover the 27 Survey Blocks assigned to SoMAS plus a site in deeper water (Barchans). The 2017-2018 SoMAS surveys have few gaps except for 13_JJ (a compilation of transit tracks that overlap the grid 13_DM) and Barchans (lines that image barchan dunes that are migrating across the seafloor). The data is not to be used for navigation. The field surveys were performed in December 2017 to March 2018 (file names DM) and June-July 2018 (file names JJ). The data was collected on the SoMAS Research Vessel Donald W Pritchard using an EM3000D echo-sounder for the surveys from December, 2017 through March, 2018, and using an EM2040cD (dual-head) echo-sounder for data collected in June and July, 2018. All field programs used an Applanix motion sensor system for vessel motion and heading, GPS positions corrected using data from the ACORN RTN (UConn) system, vessel elevations determined using GPS RTN elevations supplemented by scaled and offset land-based water-level measurements, and sound velocity profiles collected using an AML BASEX probe. Bathymetry data was processed using CARIS HIPS and SIPS (version 10.4). Data points were edited to remove spurious bed elevations and sound-velocity refraction corrections were applied. Data values were gridded at 1 m horizontal resolution using the Swath Angle gridding algorithm into a series of 26 base maps (resolution is 2 m for the 2018 Barchans file). The 32-bit GeoTIFF gridded base maps are projected in NAD_1983_2011_UTM_Zone_18N and seafloor elevations are reported in meters relative to NAVD-88. Vertical elevations are accurate to about 0.1 to 0.2 m. Elevations may be less accurate at the outer edges of the swath where refraction artifacts can occur. Horizontal positions are accurate to about 1 m. The data files show the conditions at the time of the survey in 2017-2018. The full suite of SoMAS mapping comprises four components: multibeam bathymetry (26 maps), bathymetry hillshade (26 maps), multibeam backscatter (26 maps), and sidescan sonar backscatter (9 maps), for a total of 87 maps. The multibeam bathymetry and backscatter data were integrated by NOAA into project-wide maps that can be found at NCEI (Dataset 0167531 version 2.2, https://doi.org/10.25921/tgp1-w632). Funding for this study was provided by the Long Island Sound Seafloor Mapping Fund administered cooperatively by the EPA Long Island Sound Study and the Connecticut Department of Energy and Environmental Protection (DEEP).
DOI: 10.15468/dl.m8g8mr
title: Occurrence Download

description: A dataset containing 823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sceloporus parvus Smith, 1934"
 ]
}

 The dataset includes 823 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028876-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7wxa5w
title: Occurrence Download

description: A dataset containing 247 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polylepis tarapacana Phil."
 ]
}

 The dataset includes 247 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028877-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28781030
title: AIBP-CAV-1-VEGFR3 Axis Contributes to Lymphatic Cell Fate and Lymphangiogenesis

description: The lymphatic system maintains tissue fluid balance, and its dysfunction can result in lymphedema. Although cholesterol is essential for cellular function, its role in lymphatic development has remained unknown. Here, we identify APOA1 binding protein (AIBP) as a key regulator that promotes lymphatic endothelial cell (LEC) fate specification and lymphangiogenesis. Mechanistically, AIBP reduces plasma membrane cholesterol content, thereby enhancing VEGFR3 signaling by disrupting caveolae—small plasma membrane invaginations formed by the scaffolding protein caveolin-1 (CAV-1)—and relieving CAV-1–mediated inhibition. In zebrafish and mice, AIBP loss impairs VEGFR3 signaling and lymphatic development, defects that can be rescued by CAV-1 deletion or by a VEGFR3 mutant (VEGFR3<sup>AAA</sup>) lacking CAV-1 binding. Administration of recombinant AIBP augments VEGFC-induced lymphangiogenesis and accelerates the resolution of secondary lymphedema in adult mice. These findings define the AIBP–CAV-1 axis as a critical regulator of VEGFR3 signaling and lymphatic growth, offering new therapeutic opportunities for treating lymphatic dysfunction.
DOI: 10.6084/m9.figshare.29053286
title: Methylation SRR5836475

description: Differential methylation
DOI: 10.6073/pasta/64d9c9998ec40206b8fc4d8a92d28ac6
title: Climate data for D1 data logger (CR1000), 2014 - ongoing, 10 minute.

description: Climatological data are collected from the D1 climate station on
 Niwot Ridge (3738 m elevation) throughout the year. Data were
 recorded using a Campbell Instruments CR1000 data logger. Maximum
 and minimum values are recorded instantaneously, with a sampling
 interval of 5 seconds and programmed to generate 10 minute output.
 These data represent the native resolution (10 minute) data from
 2014 onward, with quality flags applied but no data removed.
DOI: 10.6084/m9.figshare.29053292
title: Coverage SRR5836475

description: Differential methylation
DOI: 10.15468/dl.nd6wss
title: Occurrence Download

description: A dataset containing 2955 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ambrosia artemisiifolia L.",
 "Country is Sweden",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 2955 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028879-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c53776723
title: MassIVE MSV000097856 - Site-specific TMT O-GlcNAc proteomics
title: The liver circadian clock and hepatic transcriptome are highly responsive to metabolic signals generated from feeding-fasting rhythm. Previous studies have identified a number of nutrient-sensitive signaling pathways that could interpret metabolic input to regulate rhythmic hepatic biology. Here, we investigated the role of O-GlcNAcylation, a nutrient-sensitive post-translational modification (PTM) in mediating metabolic regulation of rhythmic biology in the liver. We observed daily oscillation of global nuclear protein O-GlcNAcylation in the liver of mice subjected to night-restricted feeding (NRF). Among 449 O-GlcNAcylated proteins we identified, 64 proteins are rhythmically O-GlcNAcylated over a 24-hour day-night cycle. Proteins involved in gene expression were enriched among rhythmically O-GlcNAcylated nuclear proteins, suggesting rhythmic O-GlcNAcylation may directly shape the daily rhythmicity of the hepatic transcriptome. We also identified xxx O-GlcNAcylation sites, demonstrating day-night differences of site-specific O-GlcNAcylation. Furthermore, we showed that rhythmic O-GlcNAcylation can also indirectly modulate the hepatic transcriptome by interacting with phosphorylation. Specifically, several proteins harboring O-GlcNAcylation-phosphorylation interplay motif exhibit rhythmic O-GlcNAcylation and phosphorylation. We show that O-GlcNAcylation occur at a phospho-degron of a key circadian transcriptional activator, circadian locomotor output cycles kaput (CLOCK), thus regulating its stability and transcriptional output. Finally, we report that day-restricted feeding (DRF) in the nocturnal mouse dampens O-GlcNAcylation rhythm. This suggests the dysregulation of daily nuclear protein O-GlcNAcylation rhythm could partially contribute to the disruption in liver transcriptomic rhythm previously observed in DRF condition, despite not the primary driver. In summary, our results provide new mechanistic insights into metabolic regulation of daily hepatic transcriptomic rhythm via interplay between O-GlcNAcylation and phosphorylation and shed light on the deleterious effects of improper mealtimes.
DOI: 10.5281/zenodo.15399539
title: The Trump 2016 Primary Corpus (TPC2016)

description: The Trump 2016 Primary Corpus (TPC2016) is a curated and annotated dataset containing full transcripts of Donald J. Trump’s campaign speeches delivered during the 2016 Republican primary. The corpus includes 222 rally transcripts, each accompanied by detailed metadata, an annotation guide, citation formats, and a licensing agreement. This collection is intended for use in political discourse analysis, corpus linguistics, media studies, and computational text analysis.

All materials are encoded in UTF-8 plain text and follow a standardized naming convention. The dataset includes a CSV metadata file with detailed contextual information for each rally, a license file, and documentation for reuse.

TPC2016 is offered under a CC BY 4.0 license and aims to support reproducibility and openness in the study of populism, rhetoric, and political communication.
DOI: 10.6084/m9.figshare.29053295
title: SRR5836475

description: asdfgasfsdfsd
DOI: 10.15468/dl.qahyqz
title: Occurrence Download

description: A dataset containing 803 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sceloporus pyrocephalus Cope, 1864"
 ]
}

 The dataset includes 803 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028881-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29053328
title: SRR5836475_coverage

description: dfghfghdfghdfghdfg
DOI: 10.15468/dl.3t9p2d
title: Occurrence Download

description: A dataset containing 247 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dufourea holocyanea (Cockerell, 1925)"
 ]
}

 The dataset includes 247 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028883-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29053340
title: Methylation SRR5836476

description: Differential methylation
DOI: 10.15468/dl.sm9kx8
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-98.05625 19.72602,-98.06881 19.70337,-98.1104 19.68578,-98.14373 19.68365,-98.15972 19.66939,-98.24079 19.67586,-98.25532 19.71841,-98.27248 19.72469,-98.33167 19.72232,-98.3238 19.6853,-98.3817 19.60936,-98.48377 19.61878,-98.51983 19.60307,-98.56638 19.64025,-98.60902 19.60236,-98.64733 19.60783,-98.68138 19.59828,-98.70604 19.55934,-98.65323 19.46599,-98.59128 19.44921,-98.57028 19.46677,-98.52319 19.46087,-98.47028 19.36083,-98.44127 19.32525,-98.40772 19.31593,-98.41025 19.29171,-98.3804 19.26172,-98.36892 19.22612,-98.27151 19.16331,-98.23024 19.15673,-98.22304 19.13664,-98.16618 19.10507,-98.11942 19.13528,-98.10012 19.16292,-98.04153 19.21023,-98.03169 19.23094,-97.99862 19.19832,-97.9282 19.16421,-97.88984 19.18696,-97.89059 19.20196,-97.85099 19.22293,-97.87029 19.27059,-97.83865 19.30156,-97.80047 19.30158,-97.77139 19.28375,-97.74509 19.30526,-97.69093 19.28589,-97.64609 19.30641,-97.62567 19.33139,-97.63145 19.3554,-97.67386 19.36747,-97.7548 19.45754,-97.81475 19.48252,-97.84595 19.46893,-97.85817 19.49313,-97.88975 19.50458,-97.86818 19.55335,-97.91417 19.59209,-97.95138 19.60374,-97.9799 19.62816,-98.04221 19.64022,-98.04007 19.69959,-98.05625 19.72602))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Orchidaceae"
 ]
}

 The dataset includes 143 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028882-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5fc4b7
title: Occurrence Download

description: A dataset containing 237 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cienfuegosia yucatanensis Millsp."
 ]
}

 The dataset includes 237 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028885-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29053373
title: Coverage SRR5836476

description: Differential methylation
DOI: 10.25345/c5zg6gk8k
title: MassIVE MSV000097857 - GNPS Alternaria alstroemeriae S6
title: Liquid chromatography tandem mass spectrometry (LC MS MS) analysis of the crude extract of isolate S6 was performed using an Orbitrap Exploris 120 mass spectrometer (Thermo Scientific). Chromatographic separation was carried out through an ACE Excel Super C18 column (250 4.6 mm, 5 ) with mobile phases: A (0.1% formic acid in water) and B (0.1% formic acid in methanol). The gradient elution program was as follows: 0 1 min: 5% B (isocratic), 1 11 min: 5 100% B (linear gradient), 11 13 min: 95% B (isocratic), 13 15 min: 5% B (linear gradient), 15 16 min: 5% B (column equilibration). The analyse was conducted in positive ionization mode (H-ESI) with the following parameters: static spray voltage, sheath gas: 35 arbitrary units (Arb), auxiliary gas: 10 Arb, ion transfer tube temperature: 270 C, vaporizer temperature: 375 C. Full-scan MS spectra (resolution: 60,000) were acquired over m/z 100 1600, followed by data-dependent MS/MS scans (resolution: 15,000) of the top 4 precursor ions. Raw data files were converted to mzML format using MSConvert (ProteoWizard) and analyzed with MZmine3 (v4.4.3) [31]. The data were uploaded to the Global Natural Products Social Molecular Networking (GNPS) web platform for molecular networking [32].
DOI: 10.25345/c5tt4g575
title: MassIVE MSV000097863 - Quality assessment of plants in Office Farming Modules by secondary plant metabolite profile
title: Vertical farming can improve food production in urban areas. The OfficeFarming module (OFM) enables working environments to produce edible plant material that enables employees to consume healthy and fresh products. To estimate the internal quality of the OFM plants three different leafy vegetables (sweet basil, arugula, and red lettuce) were tested in the system. For comparison, the same plants are grown under a blue-light spectrum and sourced from professional horticultural companies. The plants were analyzed by reversed phase chromatography (RP) coupled to mass spectrometry. Flavonoids represented by two kaempferol glycosides and the plant specific substances deoxylactucin for red lettuce, eugenol for sweet basil and sulforaphane for arugula were detected in these plants. The results showed comparable qualities for sweet basil in flavonoid content and the characteristic compounds. The flavonoid content of the external arugula was distinctly reduced by 14 to 15 % compared to the OFM system beside showing an increased sulforaphane peak of 10 %. Red lettuce peaks of flavonoids in the external sample exceeded the OFM showing limits of the spectra. The results indicate the OFM can meet or exceed the standards of the source plants and seem suitable for the cultivation in this system.
DOI: 10.25345/c5fj29r5t
title: MassIVE MSV000097861 - GNPS LC-MS/MS profiling of methanolic extract of Capparis spinosa leaves
title: LC-MS/MS data of methanol extract from Capparis spinosa aerial parts. Project focuses on natural product profiling and compound identification.