cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30734249.v1
title: Supplementary Material for: DUAL-GENETIC ETIOLOGY IN AN ATYPICAL DENT DISEASE PHENOTYPE WHICH COMBINES FEATURES OF FOCAL SEGMENTAL GLOMERULOSCLEROSIS AND ELLIS-VAN CREVELD-LIKE SYNDROME: A CASE REPORT

description: Introduction. Dent disease (DD) is an X-linked recessive renal disorder characterized by features of incomplete Fanconi syndrome. DD varies in clinical presentation, manifesting with proteinuria alone or in combination with nephrocalcinosis/nephrolithiasis, and with or without chronic kidney disease (CKD), posing a challenge to clinical diagnosis. The genetic basis of DD is not completely known; about 25-35% of DD cases lack mutations in the disease-causing CLCN5 and OCRL genes. This case report represents a rare example of a patient initially suspected of having DD, but through whole exome sequencing (WES) was found to harbor pathogenic variants in the WT1 and EVC2 genes, suggesting a dual genetic etiology mimicking DD. 
Case presentation. We describe a young man with a renal phenotype resembling DD associated with nephrotic syndrome, focal segmental glomerulosclerosis (FSGS), tubular microcysts, and a significant family history of kidney disease. Also present was an extra-renal phenotype with short stature, narrow chest, recurrent upper respiratory tract infections, teeth anomalies and hypertension. 
We identified in the WT1 gene the heterozygous ultrarare missense variant (NM_024426.6:c.1088C&gt;T p.Thr363Met), classified as a variant of uncertain significance (VUS), and in the EVC2 gene the heterozygous nonsense variant (NM_147127.5:c.2833C&gt;T p.Arg945Ter), classified as pathogenic. The clinical phenotype combines WT1-related focal segmental glomerulosclerosis (FSGS) with a rare tubular phenotype of Ellis-van Creveld-like syndrome (EVC). 
Conclusions. This case report provides insights into the phenotypic complexity of hereditary nephropathies and the diagnostic challenge posed by overlapping glomerular and tubular presentations. WES enabled us to expand our knowledge of the genetics of kidney diseases in adults and to reclassify the patient’s nephropathy.
DOI: 10.6084/m9.figshare.30734252
title: Supplementary Material for: National Institute of Health Stroke Scale (NIHSS) Scoring Tool Utilizing Medical Records: A Single-Center Validation Study

description: Objective: The prospective National Institutes of Health Stroke Scale (NIHSS) assessment is the standard for evaluating stroke severity. This study aimed to develop and validate an enhanced retrospective NIHSS (r-NIHSS) scoring method that integrates structured keyword mapping and established neurological scales, the Glasgow Coma Scale (GCS) for consciousness and the Medical Research Council (MRC) scale for motor strength, to enable reliable estimation of stroke severity from medical records. Subjects and Methods: We developed a structured chart-based method to estimate NIHSS scores from electronic health records, incorporating the GCS, the MRC scale, and a predefined list of standardized clinical descriptors. Four NIHSS-certified, blinded raters retrospectively evaluated 50 acute ischemic stroke patients with prospectively recorded NIHSS scores. Inter-rater reliability for each domain was analyzed using weighted kappa K(w), and agreement between r-NIHSS and prospective NIHSS (p-NIHSS) scores was assessed with the intraclass correlation coefficient (ICC). Results: Inter-rater reliability was almost perfect (ICC = 0.99 [95% CI 0.99 – 0.99]). The highest agreement across raters was seen in the level of consciousness domain (K (w) = 0.99 [95% CI 0.95 – 1.00]). The total r-NIHSS scores demonstrated near-perfect agreement with p-NIHSS scores (ICC = 0.99 [95% CI 0.98 – 0.99]). Conclusion: The updated chart-based r-NIHSS method is feasible and highly reliable for assessing stroke severity using routine medical documentation. This tool offers a practical, standardized approach for retrospective and registry-based studies where prospective NIHSS assessments are unavailable.
DOI: 10.6084/m9.figshare.30734252.v1
title: Supplementary Material for: National Institute of Health Stroke Scale (NIHSS) Scoring Tool Utilizing Medical Records: A Single-Center Validation Study

description: Objective: The prospective National Institutes of Health Stroke Scale (NIHSS) assessment is the standard for evaluating stroke severity. This study aimed to develop and validate an enhanced retrospective NIHSS (r-NIHSS) scoring method that integrates structured keyword mapping and established neurological scales, the Glasgow Coma Scale (GCS) for consciousness and the Medical Research Council (MRC) scale for motor strength, to enable reliable estimation of stroke severity from medical records. Subjects and Methods: We developed a structured chart-based method to estimate NIHSS scores from electronic health records, incorporating the GCS, the MRC scale, and a predefined list of standardized clinical descriptors. Four NIHSS-certified, blinded raters retrospectively evaluated 50 acute ischemic stroke patients with prospectively recorded NIHSS scores. Inter-rater reliability for each domain was analyzed using weighted kappa K(w), and agreement between r-NIHSS and prospective NIHSS (p-NIHSS) scores was assessed with the intraclass correlation coefficient (ICC). Results: Inter-rater reliability was almost perfect (ICC = 0.99 [95% CI 0.99 – 0.99]). The highest agreement across raters was seen in the level of consciousness domain (K (w) = 0.99 [95% CI 0.95 – 1.00]). The total r-NIHSS scores demonstrated near-perfect agreement with p-NIHSS scores (ICC = 0.99 [95% CI 0.98 – 0.99]). Conclusion: The updated chart-based r-NIHSS method is feasible and highly reliable for assessing stroke severity using routine medical documentation. This tool offers a practical, standardized approach for retrospective and registry-based studies where prospective NIHSS assessments are unavailable.
DOI: 10.5281/zenodo.17735717
title: Spectral induced polarization monitoring of toluene biodegradation by Rhodococcus wratislaviensis in controlled laboratory conditions

description: This repository encompasses the acquired experimental data for time lapse monitoring of toluene biodegradation using a strain of Rhodococcus wratislaviensis with SIP and geochemical data. Data pertain to acquisition at both the inlet and outlet of the column experiment. The files are:

dipole_1_sip_frequency_monitoring.csv : Time lapse frequency monitoring at 1.5 mHz of the column undergoing biodegration over a period of 11 days. This dataset cquisition was performed at dipole 1 located at the bottom of the 25 cm long column. 

dipole_2_sip_frequency_monitoring.csv : Time lapse frequency monitoring at 1.5 mHz of the column undergoing biodegration over a period of 11 days. This dataset acquisition was performed at dipole 2 located in the middle of the 25 cm long column. 

dipole_3_sip_frequency_monitoring.csv : Time lapse frequency monitoring at 1.5 mHz of the column undergoing biodegration over a period of 11 days. This dataset acquisition was performed at dipole 3 located at the top of the 25 cm long column. 

Inlet_Conductivity_and_pH.csv : This file contains electrical conductivity measurement and pH of the pore solution measured at the inlet that is before injection of the culture solution in the column.

Inlet_oxygene.csv : This file contains dissolved oxygen content of the pore solution measured at the inlet that is before injection of the culture solution in the column.

Inlet_toluene.csv : This file contains toluene concentration in the growth solution measured at the inlet that is before injection of the culture solution in the column.

Outlet_Conductivity_and_pH.csv : This file contains electrical conductivity measurement and pH of the pore solution measured at the outlet that is after the poral solution has circulated through the column.

Outlet_oxygene.csv : This file contains dissolved oxygen content of the pore solution measured at the inlet that is after the poral solution has circulated through the column.

Outlet_toluene.csv : This file contains toluene concentration in the growth solution measured at the inlet that is after the poral solution has circulated through the column.

The file named spectra contains spectral induced polarization data for the same three dipoles at specific dates. These dates are as follows : 0, 2, 3, 5, 8, 9 and 10.
DOI: 10.5281/zenodo.17735716
title: Spectral induced polarization monitoring of toluene biodegradation by Rhodococcus wratislaviensis in controlled laboratory conditions

description: This repository encompasses the acquired experimental data for time lapse monitoring of toluene biodegradation using a strain of Rhodococcus wratislaviensis with SIP and geochemical data. Data pertain to acquisition at both the inlet and outlet of the column experiment. The files are:

dipole_1_sip_frequency_monitoring.csv : Time lapse frequency monitoring at 1.5 mHz of the column undergoing biodegration over a period of 11 days. This dataset cquisition was performed at dipole 1 located at the bottom of the 25 cm long column. 

dipole_2_sip_frequency_monitoring.csv : Time lapse frequency monitoring at 1.5 mHz of the column undergoing biodegration over a period of 11 days. This dataset acquisition was performed at dipole 2 located in the middle of the 25 cm long column. 

dipole_3_sip_frequency_monitoring.csv : Time lapse frequency monitoring at 1.5 mHz of the column undergoing biodegration over a period of 11 days. This dataset acquisition was performed at dipole 3 located at the top of the 25 cm long column. 

Inlet_Conductivity_and_pH.csv : This file contains electrical conductivity measurement and pH of the pore solution measured at the inlet that is before injection of the culture solution in the column.

Inlet_oxygene.csv : This file contains dissolved oxygen content of the pore solution measured at the inlet that is before injection of the culture solution in the column.

Inlet_toluene.csv : This file contains toluene concentration in the growth solution measured at the inlet that is before injection of the culture solution in the column.

Outlet_Conductivity_and_pH.csv : This file contains electrical conductivity measurement and pH of the pore solution measured at the outlet that is after the poral solution has circulated through the column.

Outlet_oxygene.csv : This file contains dissolved oxygen content of the pore solution measured at the inlet that is after the poral solution has circulated through the column.

Outlet_toluene.csv : This file contains toluene concentration in the growth solution measured at the inlet that is after the poral solution has circulated through the column.

The file named spectra contains spectral induced polarization data for the same three dipoles at specific dates. These dates are as follows : 0, 2, 3, 5, 8, 9 and 10.
DOI: 10.5281/zenodo.17736282
title: 20 Newsgroups (5 Topics) — PII-Augmented version

description: Description

This dataset is a curated subset of the 20 Newsgroups corpus, containing 5 clearly distinguishable topics for experimentation with intelligent text anonymization and topic classification

It was created as part of the Bachelor’s thesis “Intelligent anonymization for natural language processing and inference” at FIIT STU, 2025
DOI: 10.5281/zenodo.17736283
title: 20 Newsgroups (5 Topics) — PII-Augmented version

description: Description

This dataset is a curated subset of the 20 Newsgroups corpus, containing 5 clearly distinguishable topics for experimentation with intelligent text anonymization and topic classification

It was created as part of the Bachelor’s thesis “Intelligent anonymization for natural language processing and inference” at FIIT STU, 2025
DOI: 10.15468/dl.tsu773
title: Occurrence Download

description: A dataset containing 119 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhodiola atuntsuensis"
 ]
}

 The dataset includes 119 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011818-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dz5ca4
title: Occurrence Download

description: A dataset containing 1641103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "DecimalLatitude is greater than or equal to 34.085278",
 "DecimalLatitude is less than or equal to 39.085278",
 "DecimalLongitude is greater than or equal to -120.0",
 "DecimalLongitude is less than or equal to -115.0",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 1641103 records from 319 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011791-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tfp4jj
title: Occurrence Download

description: A dataset containing 85481 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.countrycode = 'CL'
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence."year" &gt;= 2000 AND occurrence."year" &lt;= 2025)
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 85481 records were derived from 907 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011799-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kpyx62
title: Occurrence Download

description: A dataset containing 31563 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epinephelus guttatus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 31563 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011820-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tknybz
title: Occurrence Download

description: A dataset containing 765690 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prunus spinosa L."
 ]
}

 The dataset includes 765690 records from 3421 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017212-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4xqbya
title: Occurrence Download

description: A dataset containing 1637 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhynchopsitta terrisi R.T.Moore, 1947"
 ]
}

 The dataset includes 1637 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069450-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5qqtk
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kinosternon alamosae Berry & Legler, 1980"
 ]
}

 The dataset includes 108 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088942-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6m55wf
title: Occurrence Download

description: A dataset containing 478 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cystopteris sudetica A.Braun & Milde"
 ]
}

 The dataset includes 478 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052077-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vmyms3
title: Occurrence Download

description: A dataset containing 1525 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Philotarsidae"
 ]
}

 The dataset includes 1525 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107463-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aenj2g
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Kinosternon alamosae Berry & Legler, 1980"
 ]
}

 The dataset includes 108 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088941-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gs5vwz
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Phlegmariurus hamiltonii (Spreng.) Á.Löve & D.Löve"
 ]
}

 The dataset includes 166 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052124-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vkvye3
title: Occurrence Download

description: A dataset containing 5623 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lathyrus angulatus L.",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 5623 records from 247 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0128594-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.57hcxk
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Trichilia blanchetii C.DC."
 ]
}

 The dataset includes 13 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107486-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.trudx3
title: Occurrence Download

description: A dataset containing 4447 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spinus atratus (d'Orbigny & Lafresnaye, 1837)"
 ]
}

 The dataset includes 4447 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052106-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yb7bfx
title: Occurrence Download

description: A dataset containing 1060970490 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EOD – eBird Observation Dataset"
 ]
}

 The dataset includes 1060970490 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019204-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cr9zd3
title: Occurrence Download

description: A dataset containing 885 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cucujus clavipes Fabricius, 1781"
 ]
}

 The dataset includes 885 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052075-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k8a98a
title: Occurrence Download

description: A dataset containing 642 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dillenia indica L."
 ]
}

 The dataset includes 642 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0098191-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wcttct
title: Occurrence Download

description: A dataset containing 1060970490 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is EOD – eBird Observation Dataset"
 ]
}

 The dataset includes 1060970490 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0165052-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.42scwa
title: Occurrence Download

description: A dataset containing 1582 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Liposcelididae"
 ]
}

 The dataset includes 1582 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107460-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.avgp8k
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myrcia crassimarginata McVaugh"
 ]
}

 The dataset's 1 records were derived from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071573-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g2xwex
title: Occurrence Download

description: A dataset containing 124 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tripidium bengalense (Retz.) H.Scholz"
 ]
}

 The dataset includes 124 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0128595-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.