cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.j3vuuw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Polyplectron napoleonis",
 "Country is Chinese Taipei",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049356-250811113504898/datasets/export for details.
DOI: 10.5281/zenodo.15558533
title: LeafMachine2 Data: Myricaceae Leaf Outlines and ECT

description: Myricaceae - 6,027 leaves - 840.9 MB: This repository contains HDF5 (.h5) files with leaf morphological data for species in the Myricaceae family. Each file represents a single leaf specimen and contains leaf shape outlines, the 128x128 ECT matrix, and associated metadata.

File Contents

This dataset contains 6,027 leaves from taxa in the family Myricaceae. Some leaves may be partial, predated, broken, or incomplete. 

Each .h5 file contains the following datasets:



ECT_matrices/ - Euler Characteristic Transform (ECT) matrices capturing topological features of leaf shapes

shapes/shape_0 - Coordinate array (x,y) defining the leaf outline boundary. 

component_names - Original filename identifier (without extension)

group_labels - Taxonomic classification dictionary containing:



family: Taxonomic family name

genus: Genus classification

genus_species: Binomial species name

fullname: Complete taxonomic identifier




Data Format

Files are organized with standardized naming: [Herbarium]_[ID]_[Family]_[Genus]_[Species]__[LeafID].h5

Shape coordinates are normalized to a unit circle centered at the origin (-0.5 to 0.5 range), vertically oriented.

Uncompressed Size:

840.9 MB

Usage

Code for reading, processing, and analyzing these files is available at: https://github.com/Gene-Weaver/LM2-Data-Tools

The repository includes functions for extracting data and generating visualizations.

Citation: Please cite the LeafMachine2 paper and this dataset.



Weaver, W. N., & Smith, S. A. (2023). From leaves to labels: Building modular machine learning networks for rapid herbarium specimen analysis with LeafMachine2. Applications in Plant Sciences, 11(5), e11548. https://doi.org/10.1002/aps3.11548
DOI: 10.5281/zenodo.15558534
title: LeafMachine2 Data: Myricaceae Leaf Outlines and ECT

description: Myricaceae - 6,027 leaves - 840.9 MB: This repository contains HDF5 (.h5) files with leaf morphological data for species in the Myricaceae family. Each file represents a single leaf specimen and contains leaf shape outlines, the 128x128 ECT matrix, and associated metadata.

File Contents

This dataset contains 6,027 leaves from taxa in the family Myricaceae. Some leaves may be partial, predated, broken, or incomplete. 

Each .h5 file contains the following datasets:



ECT_matrices/ - Euler Characteristic Transform (ECT) matrices capturing topological features of leaf shapes

shapes/shape_0 - Coordinate array (x,y) defining the leaf outline boundary. 

component_names - Original filename identifier (without extension)

group_labels - Taxonomic classification dictionary containing:



family: Taxonomic family name

genus: Genus classification

genus_species: Binomial species name

fullname: Complete taxonomic identifier




Data Format

Files are organized with standardized naming: [Herbarium]_[ID]_[Family]_[Genus]_[Species]__[LeafID].h5

Shape coordinates are normalized to a unit circle centered at the origin (-0.5 to 0.5 range), vertically oriented.

Uncompressed Size:

840.9 MB

Usage

Code for reading, processing, and analyzing these files is available at: https://github.com/Gene-Weaver/LM2-Data-Tools

The repository includes functions for extracting data and generating visualizations.

Citation: Please cite the LeafMachine2 paper and this dataset.



Weaver, W. N., & Smith, S. A. (2023). From leaves to labels: Building modular machine learning networks for rapid herbarium specimen analysis with LeafMachine2. Applications in Plant Sciences, 11(5), e11548. https://doi.org/10.1002/aps3.11548
DOI: 10.15468/dl.xjmunc
title: Occurrence Download

description: A dataset containing 2258 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((25.6578 -34.0342,58.80572 -34.0342,58.80572 0.33103,25.6578 0.33103,25.6578 -34.0342))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tursiops"
 ]
}

 The dataset includes 2258 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031108-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z3gg9e
title: Occurrence Download

description: A dataset containing 11525 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Synodus foetens"
 ]
}

 The dataset includes 11525 records from 139 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031109-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30610646
title: Cross-sectional associations between kinesiophobia and other outcomes.

description: Studied relationships between kinesiophobia and other outcomes in patients post-ACLR.
DOI: 10.6084/m9.figshare.30610646.v1
title: Cross-sectional associations between kinesiophobia and other outcomes.

description: Studied relationships between kinesiophobia and other outcomes in patients post-ACLR.
DOI: 10.6084/m9.figshare.30184057.v2
title: <b>Supplemental Videos S1-S5</b>

description: <b>Supplemental Video S1.</b> Characterization of 3D endothelium. Human umbilical vein endothelial cells (HUVECs) were cultured in two-lane Organoplates (Mimetas), forming 3D tubular structures within 4–5 days. The 3D HUVECs were stained for CD31 (green), F-actin (red), and nuclei (blue). The 3D architecture was visualized using Z-plane images captured at 8-μM intervals in confocal mode with the Opera Phenix High-Content Screening System.<br><b>Supplemental Video S2 and S3. </b>Comparisons of heparan sulfate (HS) expression between 2D endothelial cell cultures and 3D endothelium. Human umbilical vein endothelial cells (HUVECs) were cultured in <b>(</b><b>S2</b><b>) </b>24-well plates until 95% confluency or <b>(</b><b>S3</b><b>)</b> two-lane Organoplates to generate 3D endothelium. They were stained for HS (green) and nuclei (blue). Images were captured using Z-plane images at 8-μM intervals in confocal mode via the Opera Phenix High-Content Screening System.<br><b>Supplemental Video S4 and S5. </b>Comparisons of wheat germ agglutinin (WGA) staining between 2D endothelial cell cultures and 3D endothelium. Human umbilical vein endothelial cells (HUVECs) were cultured in <b>(</b><b>S4</b><b>)</b> 24-well plates until 95% confluency or <b>(</b><b>S5</b><b>)</b> two-lane Organoplates to generate 3D endothelium. They were stained with WGA (green) and nuclei (blue). Images were captured using Z-plane images at 8-μM intervals in confocal mode via the Opera Phenix High-Content Screening System.
DOI: 10.15468/dl.fykg59
title: Occurrence Download

description: A dataset containing 9413 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-180 66.34,180 66.34,180 90,-180 90,-180 66.34))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Calanus glacialis",
 "Year 2000-2025"
 ]
}

 The dataset includes 9413 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031111-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k26upu
title: Occurrence Download

description: A dataset containing 285 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spizocorys fringillaris"
 ]
}

 The dataset includes 285 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031112-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j467we
title: Occurrence Download

description: A dataset containing 1796 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (USA.41_1, USA.34_1, USA.11_1, USA.10_1, USA.43_1, USA.47_1, USA.1_1, USA.49_1)",
 "TaxonKey is Mephitis mephitis"
 ]
}

 The dataset includes 1796 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031110-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.avfdmw
title: Occurrence Download

description: A dataset containing 6339674 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hesperiidae, Lycaenidae, Nymphalidae, Papilionidae, Pieridae, Riodinidae)",
 "Country is France",
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Specimen, Machine Observation)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 6339674 records from 6456 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031088-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5phy8v
title: Occurrence Download

description: A dataset containing 3189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.10.5_1",
 "OccurrenceStatus is Present",
 "Year 2012-2024"
 ]
}

 The dataset includes 3189 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006835-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h43rnj
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Material citation, Material sample)",
 "OccurrenceStatus is Present",
 "TaxonKey is Euphorbia eglandulosa"
 ]
}

 The dataset includes 76 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006837-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6pmcak
title: Occurrence Download

description: A dataset containing 14141892 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Ardea herodias"
 ]
}

 The dataset includes 14141892 records from 374 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006804-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jq587d
title: Occurrence Download

description: A dataset containing 378 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thunnus albacares",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2020",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 378 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006836-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p8d44a
title: Occurrence Download

description: A dataset containing 39773 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Styphnolobium japonicum"
 ]
}

 The dataset includes 39773 records from 415 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006833-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5fsf4m
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Cyclopes ida"
 ]
}

 The dataset includes 14 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006838-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8uyasn
title: Occurrence Download

description: A dataset containing 12152 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thunnus thynnus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 12152 records from 128 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006839-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/5nktg5
title: Registros de mamíferos en cámaras trampa Repsa 2024 - Grupo HAME

description: Se instalaron 12 cámaras trampa (Campark T45) durante los primeros días de julio de 2024. Estuvieron activas las 24 horas, aunque no todas registraron eventos de fotocapturas. Se retiraron hacia el final del mismo mes. Con estos datos se construyó un informe de diversidad biológica terrestre, estimando abundancias poblacionales de mamíferos por medio de modelos de encuentros aleatorios, y se diagramaron gráficas de niveles de actividad de los animales.
DOI: 10.15468/dl.98ya9k
title: Occurrence Download

description: A dataset containing 1467 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cinnamomum japonicum"
 ]
}

 The dataset includes 1467 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006840-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17505726
title: Simulation dataset for "Flow Crossover and Parallel Outflow during Collisionless Magnetic Reconnection"

description: Simulation dataset and Python code for the figures used in the manuscript.
DOI: 10.5281/zenodo.15748190
title: Simulation dataset for "Flow Crossover and Parallel Outflow during Collisionless Magnetic Reconnection"

description: Simulation dataset and Python code for the figures used in the manuscript.
DOI: 10.15468/dl.cpas7n
title: Occurrence Download

description: A dataset containing 4567 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Mus musculus, Mus domesticus)",
 "Year 2000-2025"
 ]
}

 The dataset includes 4567 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006841-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vrf2cq
title: Occurrence Download

description: A dataset containing 1413 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Haiti",
 "OccurrenceStatus is Present",
 "TaxonKey is Piperaceae"
 ]
}

 The dataset includes 1413 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006842-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ujst8
title: Occurrence Download

description: A dataset containing 453 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "TaxonKey is Euphorbia francoana"
 ]
}

 The dataset includes 453 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006843-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hftpbj
title: Occurrence Download

description: A dataset containing 1108 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "OccurrenceStatus is Present",
 "TaxonKey is Microtus arvalis",
 "Year 2000-2025"
 ]
}

 The dataset includes 1108 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006845-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5edcn
title: Occurrence Download

description: A dataset containing 7254 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Metasequoia glyptostroboides"
 ]
}

 The dataset includes 7254 records from 376 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006844-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eq8vwb
title: Occurrence Download

description: A dataset containing 4961 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "OccurrenceStatus is Present",
 "TaxonKey is Mus spretus",
 "Year 2000-2025"
 ]
}

 The dataset includes 4961 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006846-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30702587.v1
title: Teacher AI competence: UNESCO framework

description: development and assessment of university teacher AI literacy
DOI: 10.6084/m9.figshare.30702587
title: Teacher AI competence: UNESCO framework

description: development and assessment of university teacher AI literacy
DOI: 10.5281/zenodo.17704881
title: Data: Simplification of chiral nuclear forces near the unitarity limit

description: This archive contains the raw data files corresponding to the figures in the article "Simplification of chiral nuclear forces near the unitarity limit."
DOI: 10.5281/zenodo.17704880
title: Data: Simplification of chiral nuclear forces near the unitarity limit

description: This archive contains the raw data files corresponding to the figures in the article "Simplification of chiral nuclear forces near the unitarity limit."
DOI: 10.15468/dl.8mwydx
title: Occurrence Download

description: A dataset containing 1114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "OccurrenceStatus is Present",
 "TaxonKey is Microtus cabrerae",
 "Year 2000-2025"
 ]
}

 The dataset includes 1114 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006847-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13857768
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.bmg62q
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Romerolagus diazi",
 "Year 2010-2025"
 ]
}

 The dataset includes 72 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006849-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.atzeqh
title: Occurrence Download

description: A dataset containing 15128 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dendrosicyos socotrana, Prunus ramburii, Datura innoxia, Orinus kokonorica, Mosla soochouensis, Vitis davidi, Scyphiphora hydrophylacea, Sicyos pachycarpa, Quercus fabrei, Dorcoceras hygrometricum, Erythranthe lutea, Fragaria mandshurica)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 15128 records from 458 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006850-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17025/2568361
title: BaZrO3-Ni-defect-formation

description: These data include migration energies for interstitial Ni defects in doped and undoped BaZrO3, as well as formation energies for Ni-related defects and defect complexes.
DOI: 10.15468/dl.bva57g
title: Occurrence Download

description: A dataset containing 283707 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is United States of America",
 "DatasetKey is one of (Patterns of widespread decline in North American bumble bees, UAM Insect Collection (Arctos), UAM Insect Observations (Arctos), NMNH Extant Specimen Records (USNM, US), Insect Species Occurrence Data from Multiple Projects Worldwide with Focus on Bees and Wasps in North America, Essig Museum of Entomology, Bee Biology and Systematics Laboratory, Frost Entomological Museum)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bombus Latreille, 1802"
 ]
}

 The dataset includes 283707 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007171-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28512250
title: A new species of <i>Urva</i> (Herpestidae, Carnivora) from late Upper Pleistocene deposits of East Fissure-Fillings, Fanchang, Anhui Province of Eastern China

description: Here we describe and erect a new species, <i>Urva fanchangensis</i>, from the middle or late Early Pleistocene of eastern Asia. <i>Urva fanchangensis</i> is the first known fossil species of the genus, and is a medium-sized member, characterized by moderately sized premolars, a robust P4 with a large parastyle and strong protocone, and transversely widened M1 and M2. It is closely related to the modern <i>U. urva</i> and <i>U. semitorquata</i>. Comparative studies suggest that <i>U. fanchangensis</i> is either the ancestor of <i>U. urva</i> or a common ancestor of <i>U. urva</i> and <i>U. semitorquata</i>. This species provides valuable information for estimating the divergence time of the genus as a node calibration, indicating that the divergence of <i>Urva</i> might occur more recently than previously thought.