cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.9mtdbc
title: Occurrence Download

description: A dataset containing 1139 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gyps bengalensis (Gmelin, 1788)",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 1139 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055514-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id373981.1
title: StrainInfo SI-ID 373981.1

description: StrainInfo dataset 373981 about a strain of Leptospira santarosai. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374078.1
title: StrainInfo SI-ID 374078.1

description: StrainInfo dataset 374078 about a strain of Caballeronia zhejiangensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374079.1
title: StrainInfo SI-ID 374079.1

description: StrainInfo dataset 374079 about a strain of Caballeronia zhejiangensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374085.1
title: StrainInfo SI-ID 374085.1

description: StrainInfo dataset 374085 about a strain of Caballeronia humi. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374273.1
title: StrainInfo SI-ID 374273.1

description: StrainInfo dataset 374273 about a strain of Lentilactobacillus diolivorans. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374278.1
title: StrainInfo SI-ID 374278.1

description: StrainInfo dataset 374278 about a strain of Flavobacterium chungbukense. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id374280.1
title: StrainInfo SI-ID 374280.1

description: StrainInfo dataset 374280 about a strain of Flavobacterium phragmitis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.bn7vpz
title: Occurrence Download

description: A dataset containing 1487 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dialium guineense Willd."
 ]
}

 The dataset includes 1487 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024239-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id373982.1
title: StrainInfo SI-ID 373982.1

description: StrainInfo dataset 373982 about a strain of Leptospira santarosai. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373983.1
title: StrainInfo SI-ID 373983.1

description: StrainInfo dataset 373983 about a strain of Leptospira santarosai. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373984.1
title: StrainInfo SI-ID 373984.1

description: StrainInfo dataset 373984 about a strain of Listeria monocytogenes. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id373985.1
title: StrainInfo SI-ID 373985.1

description: StrainInfo dataset 373985 about a strain of Listeria monocytogenes. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.fwlym6
title: Occurrence Download

description: A dataset containing 129107 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 {
 "or" : [
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Coordinate rounded"
 ]
 },
 "Year 1960-2019",
 "HasCoordinate is true",
 "TaxonKey is Liliaceae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 129107 records from 377 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010184-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15151/esrf-es-2237130797
title: Characterizing magnetoelectric coupling in epsilon-Fe2O3

description: Magnetoelectrics are appealing for applications because of the potential to control a magnetic state with an electric field and vice versa. Epsilon-Fe2O3 is the only known single-phase material that is a ferrimagnetic magnetoelectric at room temperature. However, because epsilon-Fe2O3 is incredibly difficult to produce, it has yet to be implemented in technology. By understanding the physics behind the magnetic and electric responses of epsilon-Fe2O3, new materials with similar properties could ben engineered. In this experiment we propose to characterize the magnetoelectric coupling in epsilon-Fe2O3 by measuring RIXS-MCD maps of a thin film in applied electric and magnetic fields.
DOI: 10.15468/dl.3dacmm
title: Occurrence Download

description: A dataset containing 1421 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "StateProvince is Mississippi",
 "TaxonKey is Bryophyta",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 1421 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016932-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4j2zjr
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melittacanthus divaricatus",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016933-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fxm9j8
title: Occurrence Download

description: A dataset containing 3475 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myrsine semiserrata",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 3475 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016934-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rxc4uq
title: Occurrence Download

description: A dataset containing 151 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mellera lobulata",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 151 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016935-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sq72vp
title: Occurrence Download

description: A dataset containing 1142 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sarcopyramis bodinieri",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 1142 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016937-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hshak8
title: Occurrence Download

description: A dataset containing 362 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mendoncia retusa",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 362 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016938-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31337749
title: Breast Cancer Combined with Primary Lung Cancer: A Study of Clinicopathologic Features and Prognostic Factors

description: We conducted a single-center retrospective study of patients with breast cancer (BC) who 42 Manuscript Click here to access/download;Manuscript;69822_R1.docx developed a second primary lung cancer (pLC) (BC-pLC; n = 54) versus BC only (n = 216) 43 undergoing curative-intent surgery from 2012 to 2017, with follow-up through June 30, 2023.
DOI: 10.6084/m9.figshare.31337749.v1
title: Breast Cancer Combined with Primary Lung Cancer: A Study of Clinicopathologic Features and Prognostic Factors

description: We conducted a single-center retrospective study of patients with breast cancer (BC) who 42 Manuscript Click here to access/download;Manuscript;69822_R1.docx developed a second primary lung cancer (pLC) (BC-pLC; n = 54) versus BC only (n = 216) 43 undergoing curative-intent surgery from 2012 to 2017, with follow-up through June 30, 2023.
DOI: 10.5281/zenodo.18203675
title: MD dataset for EGFR TMJM dimer in ordered membrane with GM3

description: EGFR Molecular Dynamics Trajectories

 

## Dataset Description

 

This dataset contains molecular dynamics simulation trajectories investigating the inhibitory mechanism of GM3 ganglioside on EGFR (Epidermal Growth Factor Receptor) activation. This trajectory is a control.  The starting structure is a dimer.

## File Contents

 

### Trajectory Files

- `EGFR_dimer_in_ordered_membrane.xtc` - Trajectory of EGFR TM-JM dimer peptides in GM3-containing membrane (10 μs)

 

 

### Structure Files

- `step5_assembly.psf` - Protein structure file for GM3-containing system

 

 

## Simulation Details

 

### System Composition

- **Membrane dimensions**: 40 × 40 nm

- **Proteins**: 4 EGFR TM-JM peptides (residues 610-659; two dimers)

- **ordered membrane system**: CHOL:DLiPC:SM = 33:33:33 mol% (upper leaflet); CHOL:DLiPC:DOPS = 33:33:33 mol% (lower leaflet)

 

 

### Simulation Parameters

- **Force field**: MARTINI 2.2 coarse-grained

- **Software**: GROMACS 2023.3

- **Temperature**: 298 K

- **Pressure**: 1 bar (semi-isotropic coupling)

- **Salt concentration**: 150 mM NaCl

- **Duration**: 10 μs per system

 

## Usage

 

These trajectories can be analyzed using standard molecular dynamics analysis tools:

 

```bash

# Example: Load with MDAnalysis (Python)

import MDAnalysis as mda

 

# Load GM3-containing system

u_gm3 = mda.Universe('with_GM3.psf', 'with_GM3.xtc')

 

# Load GM3-free system

u_free = mda.Universe('without_GM3.psf', 'without_GM3.xtc')

 

# Codes for analyses on the manuscript by Sato and Tamagaki-Asahina

 

Codes for analyses are available on github, https://github.com/takeshi-sato-dev/
DOI: 10.5281/zenodo.18203674
title: MD dataset for EGFR TMJM dimer in ordered membrane with GM3

description: EGFR Molecular Dynamics Trajectories

 

## Dataset Description

 

This dataset contains molecular dynamics simulation trajectories investigating the inhibitory mechanism of GM3 ganglioside on EGFR (Epidermal Growth Factor Receptor) activation. This trajectory is a control.  The starting structure is a dimer.

## File Contents

 

### Trajectory Files

- `EGFR_dimer_in_ordered_membrane.xtc` - Trajectory of EGFR TM-JM dimer peptides in GM3-containing membrane (10 μs)

 

 

### Structure Files

- `step5_assembly.psf` - Protein structure file for GM3-containing system

 

 

## Simulation Details

 

### System Composition

- **Membrane dimensions**: 40 × 40 nm

- **Proteins**: 4 EGFR TM-JM peptides (residues 610-659; two dimers)

- **ordered membrane system**: CHOL:DLiPC:SM = 33:33:33 mol% (upper leaflet); CHOL:DLiPC:DOPS = 33:33:33 mol% (lower leaflet)

 

 

### Simulation Parameters

- **Force field**: MARTINI 2.2 coarse-grained

- **Software**: GROMACS 2023.3

- **Temperature**: 298 K

- **Pressure**: 1 bar (semi-isotropic coupling)

- **Salt concentration**: 150 mM NaCl

- **Duration**: 10 μs per system

 

## Usage

 

These trajectories can be analyzed using standard molecular dynamics analysis tools:

 

```bash

# Example: Load with MDAnalysis (Python)

import MDAnalysis as mda

 

# Load GM3-containing system

u_gm3 = mda.Universe('with_GM3.psf', 'with_GM3.xtc')

 

# Load GM3-free system

u_free = mda.Universe('without_GM3.psf', 'without_GM3.xtc')

 

# Codes for analyses on the manuscript by Sato and Tamagaki-Asahina

 

Codes for analyses are available on github, https://github.com/takeshi-sato-dev/
DOI: 10.5281/zenodo.18637034
title: The Photospheric Origin of the Stefan-Boltzmann Constant: Empirical Recovery from Stellar Boundaries

description: This paper tests whether the Stefan-Boltzmann constant emerges from photospheric observables alone: luminosity L, radius R, and effective temperature T_{\mathrm{eff}}, with no assumed radiation law.

Surface flux F is computed as \frac{L}{4\pi R^2}, and then divided by T_{\mathrm{eff}}^4. The result is \sigma, derived purely from data.

For the Sun, the computation yields 5.670388 \times 10^{-8} W m$^{-2}$ K$^{-4}$, with a ratio to \sigma of 1.000002.

Across 190 detached eclipsing binaries, the mean ratio is 0.9965 \pm 0.0007.

This shows the constant is not a prior rule, but the direct outcome of the stellar boundary.
DOI: 10.15468/dl.aaektz
title: Occurrence Download

description: A dataset containing 563 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oreocnide integrifolia",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 563 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016939-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.enhjuz
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mirandea grisea",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 41 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016940-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.meb6sa
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "TaxonKey is Ichthyomys"
 ]
}

 The dataset includes 13 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016941-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wuybke
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Monothecium aristatum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 29 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016943-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ufwup9
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ormosia fordiana",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 125 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016942-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e3zfd4
title: Occurrence Download

description: A dataset listing the 47 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Threatened Tree Species in the Philippines"
 ]
}

 The dataset's 47 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016936-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14833970
title: BITCOIN Historical Datasets 2018-2026 Binance API
DOI: 10.15468/dl.axvuwn
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nelsonia gracilis",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016944-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rcef3b
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ormosia yunnanensis",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 17 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016945-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18633063
title: Code and Dataset for "Enhanced Texture Detection and Localization via Lightweight Neural Networks"

description: This code must be installed with Raspberry Pi to run. The code and dataset are exclusive to the article "Enhanced Texture Detection and Localization via Lightweight Neural Networks" and have been submitted to The Visual Computer.
DOI: 10.5281/zenodo.18633062
title: Code and Dataset for "Enhanced Texture Detection and Localization via Lightweight Neural Networks"

description: This code must be installed with Raspberry Pi to run. The code and dataset are exclusive to the article "Enhanced Texture Detection and Localization via Lightweight Neural Networks" and have been submitted to The Visual Computer.
DOI: 10.15468/dl.a6ee5e
title: Occurrence Download

description: A dataset containing 60076 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mustelus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 60076 records from 316 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016922-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3jr4yt
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neriacanthus grandiflorus",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 21 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016946-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.phw79m
title: Occurrence Download

description: A dataset containing 180 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sarcosperma kachinense",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 180 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016947-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14827989
title: The impact of ambient contamination on demultiplexing methods for single-nucleus multiome experiments

description: Repository for storing intermediate results for the paper titled "The impact of ambient contamination on demultiplexing methods for single-nucleus multiome experiments". Currently only has full simulation results - to be updated with more intermediates.
DOI: 10.5281/zenodo.14827990
title: The impact of ambient contamination on demultiplexing methods for single-nucleus multiome experiments

description: Repository for storing intermediate results for the paper titled "The impact of ambient contamination on demultiplexing methods for single-nucleus multiome experiments". Currently only has full simulation results - to be updated with more intermediates.
DOI: 10.5281/zenodo.18637526
title: UK Air Quality Stations Demo (GeoJSON + Timeseries JSON)
DOI: 10.15468/dl.257x6w
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neuracanthus tephrophyllus",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 40 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016949-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ejhbf
title: Occurrence Download

description: A dataset containing 171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Peponidium horridum",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 171 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016950-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.