cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17863/cam.95875
title: First Pass Homologues of Coat/Exosporium Proteins in Clostridia Spores (GCM Thesis; Appendix 7.1)

description: &lt;&gt; Appendix 7.1 PDF file containing a list of first pass homologues in Clostridia species of established spore coat and exosporium proteins from literature. The listed data includes the protein name, bacterial species, and accession number of that protein in that species. Homology was assessed using BLASTp search protocol: Spore coat and exosporium proteins from Bacillus anthracis (B. anthracis), B. subtilis and B. cereus—as well as those established previously in C. difficile, C. perfringens, and Clostridium sporogenes (C. sporogenes)—were utilized as seeds for the protein homology search. Proteins were identified through a literature review and the UniProt database. Only proteins whose localization has been previously determined to be in or external to the outer membrane were taken as “coat proteins.” In total, 154 control proteins were assessed with BLASTp. Furthermore—while the genera classification for some species differs between sources—those species presented as “Clostridium” or “Clostridioides” in the NCBI Taxonomy database were utilized. The research done here focuses on all strains of these 107 species. Homology was initially determined in the Clostridia species C. difficile, Clostridium butyricum (C. butyricum), Clostridium cadaveris (C. cadaveris), Clostridium chauvoei (C. chauvoei), Clostridium isatidis (C. isatidis), C. perfringens, Clostridium septicum (C. septicum), and C. sporogenes given the spread of these species across the diverse Clostridia phylogenetic tree. The proteomes of the remaining Clostridium and Clostridioides species were then analysed for homologues. Proteins were initially considered putative homologues based on established protocols of Gibbons, et al.. The threshold for reciprocal homology searches was set at an e-value of 1E(−10), and only the top result was taken for each species. Refer to Appendices 7.2, 7.3, and 7.4 for verified homologues.
DOI: 10.17863/cam.84546
title: Research Data supporting "Dynamic self-stabilisation in the electronic and nanomechanical properties of an organic polymer semiconductor"

description: The data set contains higher eigen mode images of C16-IDTBT polymer films together with their nanomechanical properties. The measurements were taken on a Park Systems NX20 AFM.
DOI: 10.15468/dd.35ut8w
title: Black Flying Fox Winter Diet Species within 100km of Queensland Roosts

description: List of black flying fox winter diet species locations downloaded from the Global Biodiversity Information Facility and located within 100km of a flying fox roosts in Queensland. These records were used for analysis in "Native and Non-native Winter Foraging Resources Do Not Explain Black Flying Fox Winter Roost Occupancy, authored by Baranowski and Bharti. 2024.
DOI: 10.6084/m9.figshare.c.3618035_d2
title: Additional file 1 of Binding interface change and cryptic variation in the evolution of protein-protein interactions

description: Table S1. A list of known whole-genome and small-scale duplicates complete with estimates of substitution rate and codon usage bias used in this study. (XLSX 66 kb)
DOI: 10.6084/m9.figshare.c.3618041_d1
title: Additional file 1: of The quest for canine leishmaniasis in Romania: the presence of an autochthonous focus with subclinical infections in an area where disease occurred

description: Table S1. Geographical distribution of sand fly fauna in Romania. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3618029_d3
title: Additional file 5: Table S14. of DNA methylation patterns associated with oxidative stress in an ageing population

description: Nominal significant associations (p-value &lt;0.05) for significant meQTL SNPs in GWAS data from the CARDIOGRAMplusC4D and DIAGRAM consortia. (XLSX 59Â kb)
DOI: 10.17863/cam.35772
title: Raw Data supporting article: Structure-activity relationships of hierarchical three-dimensional electrodes with photosystem II for semi-artificial photosynthesis

description: The enclosed raw data was collected for the investigation into the structure-activity relationships between photosystem II (PSII) and three-dimensional (3D) indium tin oxide (ITO) and graphene electrodes for semi-artificial photosynthesis. This includes size distribution of synthetic ITO nanoparticles obtained from transmission electron microscopy, capacitance of 3D ITO and graphene electrodes obtained from cyclic voltammetry (CV) and light transmission of 3D electrodes obtained from UV-vis spectra, attenuated total reflectance-infrared (ATR-IR) spectra of PSII-loaded ITO electrodes. Protein film-photoelectrochemistry (PF-PEC) of PSII-loaded ITO and graphene electrodes.
DOI: 10.6084/m9.figshare.c.3618047_d1
title: Additional file 4: of The CXCR4 antagonist plerixafor enhances the effect of rituximab in diffuse large B-cell lymphoma cell lines

description: Data used to generate Figure 3. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3618053_d1
title: Additional file 4 of Integrated single cell data analysis reveals cell specific networks and novel coactivation markers

description: Table S1. This xlsx file contains candidate mature markers with unknown olfactory/neuronal expression and/or function. (XLSX 8.15 KB)
DOI: 10.6084/m9.figshare.c.3618014_d6
title: Additional file 6: of An integrated genetic-epigenetic analysis of schizophrenia: evidence for co-localization of genetic associations and differential DNA methylation

description: The phenotype data for the samples used in the MZ twin replication analysis. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3618047_d2
title: Additional file 5: of The CXCR4 antagonist plerixafor enhances the effect of rituximab in diffuse large B-cell lymphoma cell lines

description: Data used to generate Figure 4. (XLSX 16 kb)
DOI: 10.4228/zalf.2012.284
title: Weather Data 2012, Muencheberg, Germany

description: The automatic weather station Müncheberg was installed in 1991 by the Leibniz Centre for Agricultural Landscape Research (ZALF) e.V. and is managed by the Institute of Landscape System Analysis. The station is located within the municipality Müncheberg, district Märkisch-Oderland, state Brandenburg, Germany. Altitude in meter: 62 NN, Geographic latitude: 52,517681 N, Geographic longitude: 14,123200 E,Type: FMA 86. In 2001, the station was replaced by a new system of the same type. In 2012, data have been collected for: soil temperatur in 20cm depth (°C); soil temperatur in 5cm depth (°C); soil temperatur in 50cm depth (°C); soil temperatur in 10cm depth (°C); soil temperatur in 100cm depth (°C); global radiation (J/cm²); relative humidity (%); air temperature, 2m above ground (°C); precipitation (mm); wind velocity (m/s); evaporation (mm)
DOI: 10.17863/cam.23425
title: Research data supporting: Revealing Nanostructures through Plasmon Polarimetry

description: Polarized optical dark-ﬁeld spectroscopy is shown to be a versatile noninvasive probe of plasmonic structures that trap light to the nanoscale. Clear spectral polarization splittings are found to be directly related to the asymmetric morphology of nanocavities formed between faceted gold nanoparticles and an underlying gold substrate. Both experiment and simulation show the inﬂuence of geometry on the coupled system, with spectral shifts Δλ = 3 nm from single atoms. Analytical models allow us to identify the split resonances as transverse cavity modes, tightly conﬁned to the nanogap. The direct correlation of resonance splitting with atomistic morphology allows mapping of subnanometre structures, which is crucial for progress in extreme nano-optics involving chemistry, nanophotonics, and quantum devices. Here are the dataset provided that contain all the information of the 4 figures of the article showing experimental as well as theoretical polarization dependent dark-field scattering of NPoM structures.
DOI: 10.6084/m9.figshare.c.3618029_d5
title: Additional file 3: of DNA methylation patterns associated with oxidative stress in an ageing population

description: Supplemental Tables. Table S1. Methylation sites associated with TGSH (FDR &lt;0.05). Table S2. Methylation sites associated with GSH (FDR &lt;0.05. Table S3. Methylation sites associated with GSSG (FDR &lt;0.05). Table S4. Methylation sites associated with ratio of GSSG-to-GSH (FDR &lt;0.05). Table S5. Methylation sites associated with levels of HCY (FDR &lt;0.05). Table S6. Methylation sites associated with levels of oxLDL (FDR &lt;0.05). Table S7. Methylation sites associated with levels of CD (FDR &lt;0.05). Table S8: Methylation sites associated with BCD-LDL (FDR &lt;0.05). (XLS 185 kb)
DOI: 10.17863/cam.44401
title: Research data supporting ‘WP 20: Preparing Scottish census data in I-CeM for the British Business Census of Entrepreneurs (BBCE)’: Burgh definitions

description: This dataset contains all the parishes that were part of Parliamentary Burghs in each census year; the method of identification is detailed in WP 20. Burgh (Burgh name) ParID (I-CeM parish ID for that census year)
DOI: 10.6084/m9.figshare.25334125
title: Data frame and script

description: Data frame and analysis script
DOI: 10.6084/m9.figshare.25334125.v1
title: Data frame and script

description: Data frame and analysis script
DOI: 10.17863/cam.70585
title: Research data underlying "Systematic improvement of molecular excited state calculations by inclusion of nuclear quantum motion: a mode-resolved picture and the effect of molecular size"

description: This dataset contains all the raw data for reproducing the results and figures of the associated publication. See README files for more information.
DOI: 10.6084/m9.figshare.c.3618074_d6
title: Additional file 4: of Deep sequencing transcriptional fingerprinting of rice kernels for dissecting grain quality traits

description: Co-expression analysis results. (XLSX 1249Â kb)
DOI: 10.5258/soton/d3322
title: Dataset: Resilience-related language in the context of food insecurity and poverty

description: GovRC and FundRC data included in the discourse analysis the dataset supports the paper 
'Being “resilient” and achieving “resilience”: from governmental discourses to the national research agenda in the contexts of food insecurity and cost of living' to be published in PLoS One
DOI: 10.17863/cam.72574
title: Research data supporting "High-throughput discovery of high-temperature conventional superconductors"

description: Crystal structures of the materials listed in Table. 1 of "High-throughput discovery of high-temperature conventional superconductors", generated using ab initio random structure searching (AIRSS). These are the structures as found to exhibit high-Tc superconductivity after an initial geometry optimization at the listed pressure. They are provided in the CASTEP .cell format and can be easily converted to a number of different formats using the C2x software (https://www.c2x.org.uk/).
DOI: 10.6084/m9.figshare.c.3618116_d2
title: MOESM2 of Key traveller groups of relevance to spatial malaria transmission: a survey of movement patterns in four sub-Saharan African countries

description: Additional file 2. Demographic and trip data for each survey country. Excel file containing two data sheets for each survey country—a traveller data sheet with a separate row for each interviewee and demographic variables as columns, and a trip data sheet with a separate row for each recorded trip and trip variables as columns. Trips are indexed with a unique TripID are matched to interviewees via a unique PersonID. Demographic and trip variables are summarized in “Traveller Variables” and “Trip Variables” sheets of the Excel file, respectively.
DOI: 10.5281/zenodo.10522273
title: LeFFI version 2.0.0

description: Release of LeFFI inflected lexicon of Italian verbs in Paralex format
DOI: 10.15468/dl.un6dtk
title: Occurrence Download

description: A dataset containing 835 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chinese Taipei",
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "TaxonKey is Drosera L."
 ]
}

 The dataset includes 835 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033186-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17863/cam.83316
title: Research Data supporting ''Dental Development and First Premolar Homology in Placental Mammals''

description: Supplementary Data are in the archive "suppdata-mckayAsher.zip" Figure S1. Predicted (x-axis) by actual (y-axis) areas of teeth in mm2 depicted for each species. Dotted diagonal lines represent agreement between predicted and observed areas. First premolar=square, dp2=circle, dp3=triangle, dp4=diamond, m1=plus, m2=asterisk, m3=crossDiamond, m4=crossCircle. Appendix S1. CSV file listing specimens and measurements, "tareas-manuallyCompleted.csv". CBL = condylobasal length (distance from anterior premaxilla to posterior occipital condyle), SC = symphysis to condyle distance. _area = length x width areas calculated for each tooth locus (see text). PRE_ = area predictions based on inhibitory cascade model (see text).
DOI: 10.15468/dl.9vfgc6
title: Occurrence Download

description: A dataset containing 835 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chinese Taipei",
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "TaxonKey is Drosera L."
 ]
}

 The dataset includes 835 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033187-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17863/cam.8261
title: Research data supporting "MgxMn2-xB2O5 Pyroborates (2/3≤x≤4/3): High Capacity and High Rate Cathodes for Li-ion batteries"

description: Data from the publication including x-ray and neutron diffraction, CIFs and electrochemistry.
DOI: 10.17863/cam.31745
title: Research Data Supporting "Optimization Using Multiple Dominance Criteria for Aerospace Design Under Uncertainty"

description: Research data supporting the publication titled "Optimization Using Multiple Dominance Criteria for Aerospace Design Under Uncertainty". This data consists of the code that was used to create the figures and results reported in the publication. It is a python package that implements the method developed in the publication.
DOI: 10.4228/zalf.2013.285
title: Weather Data 2013, Muencheberg, Germany

description: The automatic weather station Müncheberg was installed in 1991 by the Leibniz Centre for Agricultural Landscape Research (ZALF) e.V. and is managed by the Institute of Landscape System Analysis. The station is located within the municipality Müncheberg, district Märkisch-Oderland, state Brandenburg, Germany. Altitude in meter: 62 NN, Geographic latitude: 52,517681 N, Geographic longitude: 14,123200 E,Type: FMA 86. In 2001, the station was replaced by a new system of the same type. In 2012, data have been collected for: soil temperatur in 20cm depth (°C); soil temperatur in 5cm depth (°C); soil temperatur in 50cm depth (°C); soil temperatur in 10cm depth (°C); soil temperatur in 100cm depth (°C); global radiation (J/cm²); relative humidity (%); air temperature, 2m above ground (°C); precipitation (mm); wind velocity (m/s); evaporation (mm)
DOI: 10.17863/cam.42275
title: Dataset associated with 'Techno-economic Analysis of Charging and Heating Options for an Electric Bus Service in London'

description: A set of Matlab .fig files containing the data presented in this paper. These files contain all the data used to generate the figures in the paper. Most were the result of simulations.
DOI: 10.6084/m9.figshare.c.3618173_d1
title: Additional file 1: of The prognostic value of measurement of high-sensitive cardiac troponin T for mortality in a cohort of stable chronic obstructive pulmonary disease patients

description: Data set. (XLS 110 kb)
DOI: 10.6084/m9.figshare.c.3618176_d1
title: Additional file 1: of Exposure to common respiratory bacteria alters the airway epithelial response to subsequent viral infection

description: Supplemental information. (ZIP 83 kb)
DOI: 10.17863/cam.26434
title: Data supporting "Three-component assembly of multiply-substituted homoallylic alcohols and amines using a flow chemistry photoreactor"

description: Dataset related to 'Three-component assembly of multiply-substituted homoallylic alcohols and amines using a flow chemistry photoreactor'. Including 1H, 13C and 19F NMR files (.fid) as well as crystal structure file of compound 4a (.cif). The number of the folders, e.g. 4a, 4b, indicates the compound number in the manuscript. The name of the subfolders, e.g. 1H, 13C, indicates the revelant NMR file. Each individual file is directly generated and exported from Bruker NMR spectrometer. Subfolders could be imported, as a whole, to NMR softwares such as TopSpin or MestReNova, where they could be fully resolved into the corresponding NMR spectrum.
DOI: 10.60656/9af80d0c789447e5
title: Custom collection of weather station data from Palaiseau between 5 Sep 2023 and 1 Oct 2024
DOI: 10.5281/zenodo.14442236
title: Results of the Termination Competition 2018 - Raw Data
DOI: 10.5281/zenodo.14442237
title: Results of the Termination Competition 2018 - Raw Data
DOI: 10.17863/cam.73500
title: Research data supporting "Formation of the lunar primary crust from a long-lived slushy magma ocean"

description: Model results from calculations on the formation of the lunar crust, as detailed in the manuscript "Formation of the lunar primary crust from a long-lived slushy magma ocean" submitted to the journal Geophysical Research Letters.
DOI: 10.17863/cam.12834
title: Research data and code supporting 'Exploring Prehistoric Behavioral Responses to Environmental Change at Tràng An, Ninh Bình Province, Vietnam'

description: Data for attribute analysis conducted for MPhil dissertation.
DOI: 10.17863/cam.46130
title: Data supporting "Inhibition of Indole Production Increases the Activity of Quinolone Antibiotics against E. coli Persisters"

description: Data of persister assays, indole assays and flow cytometry assays performed in E. coli. See the Readme file for a detailed dataset description.
DOI: 10.17863/cam.47564
title: Supporting data to 'Terahertz-Based Porosity Measurement of Pharmaceutical Tablets: a Tutorial'

description: Raw data used in this tutorial paper to reproduce the results shown. The subfolders contain the refractive index spectra at terahertz frequencies.
DOI: 10.17863/cam.76855
title: Data for the paper "Whyte et al, Quantifying water diffusivity and metamorphic reaction rates within mountain belts, and their implications for the rheology of cratons", published in Geochemistry, Geophysics, Geosystems

description: Data for the paper "Whyte et al, Quantifying water diffusivity and metamorphic reaction rates within mountain belts, and their implications for the rheology of cratons", published in Geochemistry, Geophysics, Geosystems. The petrographic methods we used depended on whether the sample thin section had a cover slip, and whether previous whole-rock and/or mineral compositions were available. Mineral proportions were acquired by two methods. For thin sections without a cover slip, the samples were analysed by Quantitative Evaluation of Materials by Scanning Electron Microscopy (QEMSCAN) using the Quanta650F Scanning Electron Microscope (SEM) at the University of Cambridge, using 10--15 micron pixel sizes. Thin sections with a cover slip were analysed by point-counting scanned images of the thin sections using the software JMicroVision. Mineral compositional data were also acquired from two sources. Where available, the electron microprobe data from St-Onge & Lucas (1995) and St-Onge & Ijewliw (1996) were used. This dataset was supplemented using a Cameca SX-100 electron microprobe at the University of Cambridge, with analyses carried out using a 20 keV acceleration voltage, 20 nA probe current and a 1 micron spot size. Representative mineral compositional data for the samples analysed in the subsequent pseudosection modelling are given in Table~S2. Mineral abbreviations follow Whitney & Evans (2010), and mineral cation proportions were calculated using AX (Holland, 2009; accessed January 2020), which provides an estimate of X_{Fe}^{3+}} where stoichiometric criteria can be applied. Anhydrous mineral compositions were calculated to standard numbers of oxygen per formula unit (pfu), whereas biotite analyses were calculated to a total of 11, amphibole to 23 and epidote to 25 oxygen pfu. Finally, whole-rock data were acquired from two sources, either using the reported X-ray fluorescence data from St-Onge & Lucas (1995), or from combining the mineral proportions with the mineral compositions to generate a thin-section-specific bulk composition. Where both sources were available for a given sample, no significant (all within 1 wt.\%) or systematic differences were observed, and the thin-section-specific bulk composition is listed in Table~S3.
DOI: 10.6092/unibo/amsacta/7894
title: Data related to communication: "Is DFT enough? Towards Accurate High-Throughput Computational Screening of Azobenzenes for Molecular Solar Thermal Applications"

description: This dataset contains data related to the publication "Is DFT enough? Towards Accurate High-Throughput Computational Screening of Azobenzenes for Molecular Solar Thermal Applications" (DOI: 10.1039/D4ME00183D). It contains cartesian structures of azobenzene and five of its derivatives, molecular orbitals and the raw data for potential energy profiles (at XMS-CASPT2/SA-2-CASSCF(10,8)/ANO-R1, BP86/def2-SVP and BS-BP86/def2-SVP levels of theory) along the thermal isomerization reaction paths of five molecules: azobenzene (AB), 2,2',6,6'-tetrafluoroazobenzene (F2-AB-F2), 4,4'-dinitroazobenzene (NO2-AB-NO2), 4,4'-diaminoazobenzene (NH2-AB-NH2) and 4,4'-nitroaminoazobenzene (NO2-AB-NH2, also known as disperse orange 3).
DOI: 10.17863/cam.57071
title: Research data supporting "Dynamics of Deterministically-Positioned Single-Bond SERS from DNA Origami Assembled in Plasmonic Nanogaps"

description: The experimental data were taken in the NanoPhotonics Group at the Cavendish Laboratory (University of Cambridge). The dataset is for the journal article, "Dynamics of Deterministically-Positioned Single-Bond SERS from DNA Origami Assembled in Plasmonic Nanogapsy". Zip folder containing the .txt files provides the data files for each sub-figure mentioned in the manusript. Each text files contain data with x and y values with clear labelling on the top row. Please refer to the main text for the units and labellings. In the case of 2D graphs, 1c, 1f, 2a and 3ab the .txt files have the 2D matrix data representing the values at each pixel. The x and y scaling of the matrix is provided in different .txt files with filene _scaling.txt For a description of the setup and data collection methods, see the "Methods" section of the manuscript and captions of the figures from the main text.
DOI: 10.17863/cam.25139
title: Research data supporting "Dedoping of Lead Halide Perovskites Incorporating Monovalent Cations"

description: Raw data files pertaining to the materials characterization, DFT calculations and solar cell measurements.
DOI: 10.6084/m9.figshare.c.3618212_d1
title: Additional file 5: Table S5. of Associations among the plasma amino acid profile, obesity, and glucose metabolism in Japanese adults with normal glucose tolerance

description: Correlations between plasma amino acid concentration and indices of obesity and glucose metabolism. (XLS 19Â kb)
DOI: 10.48328/tudatalib-1611
title: A Generic Model for pH-Sensitive Collapse of Hydrophobic Polymers

description: This dataset contains input scripts and files to generate the data for the publication titled "A Generic Model for pH-Sensitive Collapse of Hydrophobic Polymers".