cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27865398.v1
title: A Radiograph Dataset for the Classification, Localization, and Segmentation of Primary Bone Tumors

description: Primary malignant bone tumors are the third highest cause of cancer-related mortality among patients under the age of 20. X-ray scan is the primary tool for detecting bone tumors. However, due to the varyingmorphologies of bone tumors, it is challenging for radiologists to make a definitive diagnosis based on radiographs. With the recent advancement in deep learning algorithms, there is a surge of interest in computer-aided diagnosis of primary bone tumors. Nonetheless, the development in this field has been hindered by the lack of publicly available X-ray datasets for bone tumors. To tackle this challenge, we established the Bone Tumor X-ray Radiograph dataset (termed BTXRD) in collaboration with multiple medical institutes and hospitals. The BTXRD dataset comprises 3,746 bone images (1,879 normal and 1,867 tumor), with clinical information and global labels available for each image, and distinct mask and annotated bounding box for each tumor instance. This publicly available dataset can support the development and evaluation of deep learning algorithms for the diagnosis of primary bone tumors.
DOI: 10.6084/m9.figshare.29066912.v1
title: Potential host species and geographical areas for zoonotic microparasites

description: Brazil is a potential hotspot for the emergence of novel zoonotic diseases due to its high mammalian diversity. To assess variations in the distribution of zoonotic microparasites among host species and Brazilian states, we employed Hierarchical Modelling of Species Communities (HMSC), which enables the incorporation of host traits, parasite transmission modes, and taxonomic relationships across multiple hierarchical levels. In this context, we pose four questions: (i) Are host traits (i.e., body mass, litter size, dietary guild, activity period, and foraging stratum) correlated with parasite diversity? (ii) What is the potential distribution of zoonotic microparasites within these hosts in terms of suitability (i.e., favourable environments)? (iii) Is transmission mode a shared microparasite response to host traits? (iv) Is there taxonomic convergence among parasites in relation to influential host traits?Auxiliary scripts and datasets are found here.
DOI: 10.6084/m9.figshare.13030436.v5
title: County-level crop nitrogen budget history in the US during 1970-2019

description: This document describes the datasets used for “Half-century history of crop nitrogen use efficiency in the conterminous United States: Variations over time, space and crop types”. The datasets include county-level total nitrogen (N) input rate, nitrogen use efficiency, crop recovered N and N surplus of eight crop types,in the U.S. from 1970 to 2019. The datasets reproduce the results of the manuscript and can be used to explore other topics.<br>
DOI: 10.6084/m9.figshare.27998984.v1
title: Tails Through Time - Leopard population dynamics in the Little Karoo

description: Input files and code for the multi-session spatial capture-recapture (SCR) analysis of leopards in the Little Karoo. Locations are offset to protect a Vulnerable species.
DOI: 10.6084/m9.figshare.28882904.v1
title: melbourne-timeseries: Full code & data snapshot for the paper 'Leveraging Principal Component Analysis to Uncover Urban Pedestrian Dynamics'

description: This zip file contains the code and data for the paper, to be published in the <i>Journal of Geographical Systems</i>, entitled 'Leveraging Principal Component Analysis to Uncover Urban Pedestrian Dynamics'.The GitHub repository (without the data) is: https://github.com/nickmalleson/melbourne-timeseries/
DOI: 10.6084/m9.figshare.5126635.v1
title: Supplementary Material for: Pharmacokinetics and Pharmacodynamics following Intravenous Administration of Recombinant Human Hepatocyte Growth Factor in Rats with Renal Injury

description: <b><i>Background/Aim:</i></b> Hepatocyte growth factor (HGF) plays a role in the regeneration and protection of the kidney, but little information is available concerning the pharmacokinetics of therapeutic treatment with HGF. In this study, HGF was administered after the onset of renal injury, and pharmacokinetic analysis was performed simultaneously with an efficacious dose. <b><i>Methods:</i></b> For the study of pharmacodynamics, recombinant human HGF was intravenously administered to rats with glycerol-induced acute kidney injury (AKI). In the pharmacokinetic study, rats subjected to glycerol injection or renal ischemia-reperfusion were used as models of AKI, and rats subjected to 5/6 nephrectomy were used as models of chronic kidney disease (CKD). <b><i>Results:</i></b> After intravenous administration of HGF at doses of 0.5-2.0 mg/kg, the elevation of blood urea nitrogen was suppressed, indicating that HGF had a pharmacodynamic effect. However, no significant difference was seen in the pharmacokinetic parameters such as clearance, distribution volume and half-life between the normal, AKI and CKD groups. <b><i>Conclusion:</i></b> The intravenous administration of HGF after the onset of renal dysfunction exerted a pharmacological effect on AKI, and renal injury did not affect the clearance of plasma HGF. This unaffected profile may serve as a base for the safety of HGF during therapeutic administration.
DOI: 10.6084/m9.figshare.5849724.v1
title: Material and outcomes of the OSCAR user testing session

description: This fileset contains all the material and the outcomes of a user testing session we run for testing the usability of OSCAR, the OpenCitations RDF Search Application, available at https://github.com/ivanhb/OSCAR.<br>
DOI: 10.15468/dl.zpueav
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sagamichthys schnakenbecki (Krefft, 1953)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((26.9648 19.8496,17.9648 19.8496,17.9648 10.8496,26.9648 10.8496,26.9648 19.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013140-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.15169695.v2
title: OLED_test.zip

description: Samsung
DOI: 10.6084/m9.figshare.25184027.v1
title: NSU, photoacoustic gas sensors

description: The significance of intelligent sensor systems has grown across diverse sectors, including healthcare, environmental surveillance, industrial automation, and security.Photoacoustic gas sensors are a promising type of optical gas sensor due to their high sensitivity, enhanced frequency selectivity and fast response time. However, they have limitations such as dependence on a high-power light source, a requirement for a high-quality acoustic signal detector, and sensitivity to environmental factors, affecting their accuracy and reliability. Machine learning has great potential in the analysis and interpretation of sensor data, as it can identify complex patterns and make accurate predictions based on the available data. We propose a novel approach that utilises wavelet analysis and neural networks with enhanced architectures to improve the accuracy and sensitivity of photoacoustic gas sensors. Our proposed approach has been experimentally tested for methane concentration measurements, showcasing its potential to significantly advance the field of gas detection and analysis, providing more accurate and reliable results.
DOI: 10.6084/m9.figshare.28443032.v3
title: Sleep Deprivation and the Gut Microbiome: A Systematic Review and Meta-Analysis for Gut microbes review

description: Sleep Deprivation and the Gut Microbiome: A Systematic Review and Meta-Analysis for Gut microbes review
DOI: 10.17632/v4yjj8y22s
title: Feedback literacy de alumnos en Educación Superior: revisión sistemática y síntesis temática 

description: Feedback has an enormous potential to improve student learning. However, that remains an unrealized potential due to different factors. Among this factors, the lack of appropriate skills to understand, interpret and apply feedback has been pointed out. That set of skills is known as feedback literacy. Unleashing the full potential of feedback requires the right level of student’s feedback literacy. This is still a challenge for teachers. This research aims to achieve a better understanding of the concept of feedback literacy and gather information about how to enhance students feedback literacy through a systematic review and a thematic synthesis of the qualitative literature. On the one hand, feedback literacy is a situated, multidimensional and emergent set of skills. On the other hand, the most appropriate way to develop feedback literacy is to involve students in participatory asseessments practices and training to participate in feedback processes. Since we are dealing with an emergent research topic, one of the main conclusions point out the need to discover what works, for whom and under what circumstances when it comes to improving students' feedback literacy.

Appendix Tables included.
DOI: 10.6084/m9.figshare.11962752.v2
title: NHCEH2BH3 Output files

description: Computational data as published in "Insight into the Decomposition Mechanism of Donor-Acceptor Complexes of EH2 (E = Ge and Sn) and New Adducts for Semiconductor Deposition" Jocelyn M. Sinclair,[a] Guoliang Dai,[a,b] Robert McDonald,[a] Michael J. Ferguson,[a] Alex Brown,*,[a] Eric Rivard,*,[a]<br>
DOI: 10.6084/m9.figshare.29109683.v1
title: Interview Zia.docx

description: In-depth interview transcription
DOI: 10.17632/5frjd5rv27
title: Insights into the Biology of Hearing and Deafness Revealed by Single-Cell RNA Sequencing. Ranum et al.

description: This archive contains the scRNA-Seq counts matrix and experimental metadata from "Insights into the Biology of Hearing and Deafness Revealed by Single-Cell RNA Sequencing" by Ranum et al. A complete archive of raw data from this study is accessible from the Gene Expression Omnibus (GEO) Accession: GSE114157.
DOI: 10.17632/sjdxg5cc5h
title: Angiotensin II type I receptor autoantibodies and prostate cancer: cross-sectional and longitudinal studies.

description: Autoantibodies against the angiotensin II type I receptor (AT1R) have been associated with multiple diseases (pre-eclampsia, malignant hypertension, transplant rejection, Huntington’s and Alzheimer’s disease, ovarian cancer) suggesting that while the autoantibodies are not necessarily causative they may promote disease progression. These autoantibodies (AT1RaAbs) bind and chronically activate the receptor increasing inflammatory burden. The prostate has a local renin angiotensin system that has been implicated in prostate cancer growth. Two distinct datasets were used to examine the associations between AT1RaAbs and prostate cancer. A cross-sectional set (n = 151) consisting of 101 serum specimens that were collected from patients with scheduled appointments for either elevated prostate specific antigen levels, a scheduled prostate biopsy or being seen as a newly diagnosed PCA patient in a Urology Outpatient Clinic. 80 of these patients were positive for PCA at biopsy, whereas 21 were biopsy benign (either atrophy, benign prostatic hyperplasia, high-grade prostatic intraepithelial neoplasia or inflammation). The remaining 50 specimens were collected from men visiting an offsite prostate cancer screening who were free of prostate disease. Comparisons of covariate values between groups were by Kruskal-Wallis ANOVA with Dunn’s multiple comparisons test. Pairwise correlations between AT1RaAb and clinical correlates or pathological measurements were assessed using Spearman rank correlations. The longitudinal set of pre-diagnosis serum samples from 109 men was obtained from the Baltimore Longitudinal Study of Aging. This prospective cohort study is run by the National Institute on Aging, National Institutes of Health. Clinical measures associated with each BLSA serum sample include age, BMI, blood pressure, PSA levels and, for subjects who later developed PCA, the diagnosis date. All serum is from subjects now deceased with known date of death and post-mortem pathological status of the prostate (disease-free or PCA present). Time to events (diagnosis or death) were modeled nonparametrically by Kaplan-Meier survival curves, dichotomizing samples into either low or high AT1RaAb levels and analyzing serum samples grouped as most proximal or distal to timed event. Accelerated failure estimates were used to assess the effects of other predictors on AT1RaAb association with disease-free and overall survival at most proximal or most distal time points. The datasets correspond to the a study described in the Journal of Translational Autoimmunity published online 13 August 2019, 10000. "Angiotensin receptor autoantibodies as exposures that modify disease progression: cross sectional, longitudinal and in vitro studies of prostate cancer." https://doi.org/10.1016/j.jtauto.2019.100008
DOI: 10.6084/m9.figshare.3829971.v2
title: scikit-learn pairs dataset pairs.txt

description: Part of the LFW dataset used in scikit-learn.
DOI: 10.17632/rjykr62kdh
title: Banana Leaf Disease Images

description: Huge data is one of the required resources in deep learning research to train, validate and test CNN model and get better accuracy, prediction and detection. In our study we have prepared a banana plant leaf image dataset that is used for the ‘banana disease detection’ research. It is collected from Southern Nations, Nationalities, and Peoples' Regional State Arbaminch Zuria Woreda Lante kebele and Chano kebele and Gamugofa Zone Mierab Abaya Woreda Omolante kebele where banana is widely producing area and the infection of Xanthomonas wilt and Segatoka leaf spot disease is highly observed. The data is collected from four farmers a size of one hectare farm each in three kebeles. During the data collection, the daily collected data were identified “health” or “infected” by both type of diseases. The labeled data by the first plant pathologist is verified and confirmed by the second one to make sure the quality of the collected data. Finally, the collected image was correctly labeled with three classes.   
Collecting images of banana plant leaf in thousands is too difficult. The researcher collects 1,288 pictures of banana leaf under three categories as “Health” banana leaf, “Xanthomonas” infected leafs and “Sigatoka” infected leafs.
DOI: 10.6084/m9.figshare.12250205.v1
title: Metrics and KPIs identified in the study

description: List of metrics identified and KPIs collected during the study "Digital Supply Chain Performance Measures- A Literature Review"
DOI: 10.6084/m9.figshare.12907340.v1
title: SF18_TRPL DR3-IEICO.txt

description: Time-resolved photoluminescence spectra of DR3:IEICO and IEICO and kinetics of DR3:IEICO probed at 710 nm (DR3 emission) and 860 nm (IEICO emission), showing the FRET from DR3 to IEICO, as presented in the Supporting information Figure S18.<br>
DOI: 10.6084/m9.figshare.13322471.v1
title: Raw somascan abundances of proteins measured in plasma samples from the TACERA Study

description: Raw abundances of proteins measured at baseline and 6 months in plasma samples in early Rheumatoid Arthritis (RA) patients from the TACERA Study.Patients received methotrexate at baseline.
DOI: 10.6084/m9.figshare.22712365.v3
title: Maximum and Minimum temperature at a coarser resolution (PISCOt v1.2)

description: Maximum and Minimum air temperature from PISCOt v1.2. at coarser resolution: 0.05° and 0.10° spatial resolution. Normal (average 1981-2010) and daily values from 1981 to 2020.
DOI: 10.6084/m9.figshare.24970335.v1
title: Supplemental data to "Electrostatic adsorption of polyanions onto lipid nanoparticles controls uptake, trafficking, and transfection of RNA and DNA therapies”

description: Supplementary publically available raw data for 10.1073/pnas.2307809121, including:a) Confocal microscopy of EL4 and HEK293T cells treated with fluorescently-tagged unlayered and layered LNPsb) IVIS images of mice treated with unlayered and layered LNPsc) Protein gel of unlayered and layered LNPsd) Raw data for Figs. 1-3
DOI: 10.6084/m9.figshare.26879258.v1
title: Main Data Analyses report from Patterns of sexual dimorphism in the armored tardigrades

description: Provided as .html file
DOI: 10.6084/m9.figshare.28668854.v1
title: Schizothorax_curvilabiatus.bestGeneModels.gff3

description: Chromosome-level genome annotation file of <i>Schizothorax curvilabiatus</i>
DOI: 10.17632/76cpff5wrj
title: Replication Package for The City-Wide Effects of Tolling Downtown Drivers: Evidence from London's Congestion Charge

description: This replication package contains data and code used to create all tables and figures in The City-Wide Effects of Tolling Downtown Drivers: Evidence from London's Congestion Charge. Please see READ_ME.pdf for details.
DOI: 10.6084/m9.figshare.13683961.v1
title: Functional diversity of plant communities at edge and interior of a submontane Atlantic Forest: greater functional than compositional stability - Supplementary Material

description: Families and species found in a site of submontane seasonal forest, Chapada Diamantina, Northeastern Brazil, with their habits, the identification number (IN) used in the classification of functional groups, and voucher in the State University of Feira de Santana Herbarium (HUEFS).
DOI: 10.6084/m9.figshare.22810316.v1
title: GWAS dataset for some Iranian bread wheats

description: GWAS dataset for some Iranian bread wheats
DOI: 10.6084/m9.figshare.29126117.v1
title: IEGS_data

description: The distributed operation of integrated electricity and gas systems (IEGS) can protect privacy and improve operational flexibility. However, it faces challenges such as reduced accuracy, computational inefficiency, and insufficient incentives. To address these issues, this paper proposes a distributed optimal power and gas dispatch (OPGD) method.
DOI: 10.17632/pcc8vhbvwz
title: Dataset on the life cycle carbon emission in Kenyan, Rwandan, and Tanzanian grid electricity generation and transmission systems 

description: This data attempts to answer the following research questions. First, to what extent are grid electricity generation and transmission system drivers designed and operated according to environmental governance factors? Second, what would the impacts on the lifetime decarbonisation performances of the generation and transmission systems be from considering environmental governance factors? Data was collected and estimated using the developed life-cycle carbon emission inventory (LCCEI) algorithm implemented through Excel tabs (LCCEI worksheets). The data was acquired through the LCCEI modelled parameters. The compiled data can also be customised and coded to commonly used evaluation software to enhance its open use by scientists, practitioners, and policymakers at national, regional and global levels.
DOI: 10.6084/m9.figshare.709013.v1
title: Comparison of Pre- and Post-semester FCI Scores to Evaluate the Effects of an Online Educational Software on Student Learning

description: Using the Force Concept Inventory, students within the treatment (n=21) and control (n=23) groups of an engineering mechanics course at UW – Stout were evaluated both prior to treatment and after treatment. The results of this evaluation were interpreted based on the gain for each student as a percentage of maximum possible gain. This metric allows for a more independent analysis among “weaker” and “stronger” students. The results of this interpretation showed that for the treatment group the average gain was 14.0 % (22.1 % if considering only students with positive net change). Similarly, for the control group the average gain was 5.8 % (15.6 % if considering only students with positive net change). Treatment.png shows the plot of post- versus pre-test scores for the treatment group while control.png presents the same for the control group. Each data point represents a student’s pair of scores while the line corresponds with no change in score. The further a data point is from the line, the larger the gain in that student’s score. It is apparent that for the treatment group, larger gains were realized for students spanning from the lowest scoring students to the highest. For the control group, the majority of the large gains were observed with the “weaker” students while the higher performing students actually scored the same or worse on the post-test. These results would seem to suggest that the use of the system benefited a wider selection of the students in the group while the more traditional approach showed greater gains for the “weaker” students with a possible negative impact on the “stronger” students.
DOI: 10.6084/m9.figshare.917184.v1
title: Beta MethylStyrene Oxide NMR

description: C NMR
DOI: 10.6084/m9.figshare.9724055.v1
title: GURAR-Experiment

description: This is a data race detection result from the paper: Efficient, context-sensitive and guarded data race detection.
DOI: 10.6084/m9.figshare.25712583.v1
title: Data and R codes for Liu et al. (2024): Climate modulates effects of stocking degree on carbon density in Eurasian boreal forests

description: Data and R codes for Liu et al. (2024): Climate modulates effects of stocking degree on carbon density in Eurasian boreal forests
DOI: 10.6084/m9.figshare.3465974.v1
title: tweets.csv.gz

description: TweetsThe file <code>tweets.csv.gz</code> contains a CSV file, called <code>tweets.csv</code>, with all the tweets IDs corresponding to each event in <code>events.csv</code>. The format of each line of the file is the following:<code>tweet_ID, event_ID</code>Where:<code>tweet_ID</code> is an long number indicating the Twitter ID of the given tweet. Using the Twitter REST API it is possible to retrieve all the information about the given tweet.<code>event_ID</code> corresponds to the event ID of the given tweet.
DOI: 10.17632/62v5mggpwy
title: Fibre reinforced concrete

description: Mechanical Properties of Early-Age Fibre Reinforced Concrete: A Comparative Study of Carbon, Basalt, and Steel Fibres
DOI: 10.17632/tw3759s2nd
title: Draft review List of identified proteins in 6 biological replicates of HL60 cells

description: Table 1a: List of identified proteins in 6 biological replicates of HL60 cells Relative abundance for proteins in each sample are presented in ppm Table 1b: List of proteases involved in immune response identified in 6 biological replicates of HL60 cells
DOI: 10.17632/zrz7krjhr4
title: Stereotypical processing of emotional faces: Perceptual and decisional components

description: People tend to associate anger with male faces and happiness or surprise with female faces. This angry-men-happy-women bias has been ascribed to either top-down (e.g., well-learned stereotypes) or bottom-up (e.g., shared morphological cues) processes. The dissociation between these two theoretical alternatives has proved challenging. The current effort set to tackle this challenge by harnessing two complementary metatheoretical approaches to dimensional interaction: Garner’s logic of inferring informational structure (Garner, 1974b) and General Recognition Theory – a multidimensional extension of signal detection theory (GRT, Ashby & Townsend, 1986). Conjoint application of these two rigorous methodologies afforded us to: (a) uncover the internal representation that generate the angry-men-happy-women phenomenon, (b) disentangle a variety of perceptual (bottom-up) and decisional (top-down) sources of interaction, and (c) relate operational and theoretical meanings of dimensional independence. The results show that the angry-men-happy-women bias is generated by both perceptual and decisional biases. These outcomes document the involvement of both bottom-up (e.g., shared morphological structures) and top-down (stereotypes) factors in social perception.