cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25504/fairsharing.4da1jx
title: FAIRsharing record for: microarray track data Browser Extensible Data Format
title: null

description: This FAIRsharing record describes:  The microarray track data Browser Extensible Data Format displays configuration files for microarray annotation tracks displayed on the UCSC Genome Browser.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.evxcfb
title: FAIRsharing record for: net alignment annotation Format
title: null

description: This FAIRsharing record describes:  The net file format is used to describe the axtNet data that underlie the net alignment annotations in the Genome Browser.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.gnga3t
title: FAIRsharing record for: Personal Genome SNP Format
title: null

description: This FAIRsharing record describes:  This format is for displaying SNPs from personal genomes. It is the same as is used for the Genome Variants and Population Variants tracks.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.wkh9j2
title: FAIRsharing record for: nucleotide inFormation binary Format
title: null

description: This FAIRsharing record describes:  The .nib format pre-dates the .2bit format and is less compact. It describes a DNA sequence by packing two bases into each byte.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ddmatg
title: FAIRsharing record for: Ontology of Drug Neuropathy Adverse Events
title: ODNAE

description: This FAIRsharing record describes:  The Ontology of Drug Neuropathy Adverse Events (ODNAE) is an extension of OAE which serves as a knowledge base comprising drug components, chemical entities of active drug ingredients, drug mechanisms, and drug-inducing neuropathy AEs. ODNAE is a platform for building a drug-induced neuropathy knowledge base and for analyzing the underlying mechanisms of drug-induced neuropathy. The ODNAE-based methods used in this study can also be extended to the representation and study of other categories of adverse events. Note that while the ontology remains available, it has not been updated since 2016, so please review the resource carefully before using.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.dxcrbg
title: FAIRsharing record for: eXtensible Graph Markup and Modeling Language
title: null

description: This FAIRsharing record describes:  XGMML (eXtensible Graph Markup and Modeling Language) is an XML application based on GML which is used for graph description. XGMML uses tags to describe nodes and edges of a graph. The purpose of XGMML is to make possible the exchange of graphs between differents authoring and browsing tools for graphs. The status of this format is uncertain as the homepage is no longer accessible.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.m5swgj
title: FAIRsharing record for: Protein InFormation Resource Format
title: PIFRF

description: This FAIRsharing record describes:  This PIR Database File Structure and Format Specification describes the files comprising the PIR-International Protein Sequence Database and the format of each. The format has been enhanced significantly for Release 39.00 to what is referred to as "enhanced NBRF" format.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.54814g
title: FAIRsharing record for: MDL reaction Format
title: RXN

description: This FAIRsharing record describes:  MDL reaction Format is used to describe the kinetics of chemical reactions and the chemical structure of the reactants and products.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.k97xzh
title: FAIRsharing record for: Sequence Alignment Map
title: SAM

description: This FAIRsharing record describes:  The Sequence Alignment/Map (SAM) format is a TAB-delimited text format consisting of a header section, which is optional, and an alignment section.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.dpgp6t
title: FAIRsharing record for: Stockholm Multiple Alignment Format
title: null

description: This FAIRsharing record describes:  The "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.15468/dl.abx7hj
title: Occurrence Download

description: A dataset containing 10077 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Quercus macrocarpa Michx.",
 "Geometry POLYGON((-105 38, -80 38, -80 58, -105 58, -105 38))"
 ]
}

 The dataset includes 10077 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020612-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25504/fairsharing.e2zy7j
title: FAIRsharing record for: Apollo Location Code
title: apollo-ls

description: This FAIRsharing record describes:  The Apollo Location Service (LS) Database issues persistent identifiers for locations for specific time intervals, including intervals that start in the past and are still open at present (i.e., the identifier should be used to refer to the location today). Temporally specific location identifiers are particularly important in epidemiology because the epidemiological record includes locations that do not presently exist, location names that have changed and location names whose political boundaries have changed.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.qv4b3c
title: FAIRsharing record for: Simplified Molecular Input Line Entry Specification Format
title: SMILES

description: This FAIRsharing record describes:  This format is an open specification version of the SMILES language, a typographical line notation for specifying chemical structure. It is hosted under the banner of the Blue Obelisk project, with the intent to solicit contributions and comments from the entire computational chemistry community.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.4xrzw1
title: FAIRsharing record for: Dot Bracket Notation (DBN) - Vienna Format
title: DBN

description: This FAIRsharing record describes:  The bracket notation for RNA secondary structures Pseudo-knot free secondary structures can be represented in the space-efficient bracket notation, which is used throughout the Vienna RNA package.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.6mk8xz
title: FAIRsharing record for: Minimum Information About a Biofilm Experiment
title: MIABiE

description: This FAIRsharing record describes:  The minimum information about a biofilm experiment (MIABiE) initiative has arisen from the need to find an adequate and scientifically sound way to control the quality of the documentation accompanying the public deposition of biofilm-related data, particularly those obtained using high-throughput devices and techniques. MIABiE includes several modules, each addressing specific parts of a biofilm study.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.mcgj5b
title: FAIRsharing record for: Distributed Sequence Annotation System
title: DAS

description: This FAIRsharing record describes:  The Distributed Annotation System (DAS) defines a communication protocol used to exchange annotations on genomic or protein sequences.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.xvsv9z
title: FAIRsharing record for: Biospecimen Reporting for Improved Study Quality
title: BRISQ

description: This FAIRsharing record describes:  The Biospecimen Reporting for Improved Study Quality (BRISQ) recommendations outlined are intended to apply to any study in which human biospecimens are used. The BRISQ guidelines are proposed as an important and timely resource tool to strengthen communication and publications around biospecimen-related research and help reassure patient contributors and the advocacy community that the contributions are valued and respected. Please note that, although this standard is available via the EQUATOR site, the homepage for this guideline is no longer available.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.6tgyxf
title: FAIRsharing record for: FlyBase Controlled Vocabulary
title: FBcv

description: This FAIRsharing record describes:  A structured controlled vocabulary developed and used by FlyBase, including the Drosophila phenotype ontology. It is used in annotation and classification of data related to Drosophila, including phenotypes and expression.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.fe4pja
title: FAIRsharing record for: Gene Prediction File Format
title: genePred

description: This FAIRsharing record describes:  Gene Prediction File Format (genePred) is a table format commonly used for gene prediction tracks in the Genome Browser. Variations of genePred include standard format, extended format and a format which includes RefSeq genes with gene names.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.546bcc
title: FAIRsharing record for: Namespaces in XML
title: XMLNS

description: This FAIRsharing record describes:  XML Namespaces is a W3C standard that allows combining markup elements and attributes from different XML-based markup languages. It provides a simple method for qualifying element and attribute names used in Extensible Markup Language documents by associating them with namespaces identified by URI references.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.8f9bbb
title: FAIRsharing record for: JavaScript Object Notation for Linking Data
title: JSON-LD

description: This FAIRsharing record describes:  JSON-LD is a JSON-based format to serialize Linked Data. The syntax is designed to easily integrate into deployed systems that already use JSON, and provides a smooth upgrade path from JSON to JSON-LD. It is primarily intended to be a way to use Linked Data in Web-based programming environments, to build interoperable Web services, and to store Linked Data in JSON-based storage engines. JSON-LD is a concrete RDF syntax. A JSON-LD document is both an RDF document and a JSON document and correspondingly represents an instance of an RDF data model. However, JSON-LD also extends the RDF data model to optionally allow JSON-LD to serialize generalized RDF Datasets.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.spjjv8
title: FAIRsharing record for: Functional Therapeutic Chemical Classification System
title: FTC

description: This FAIRsharing record describes:  The Functional Therapeutic Chemical Classification System (FTC) defines over 20,000 mechanisms and modes of action for approved drugs. The resource abstracts away from the traditional chemical structure-based approach and focuses solely on the mode of action of drugs. The classification sorts therapeutic agents based on their function in the human body. Please note that this resource is no longer actively maintained (source: https://github.com/loopasam/ftc/issues/1).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.6ttpnv
title: FAIRsharing record for: Maize gross anatomy
title: ZEA

description: This FAIRsharing record describes:  A structured controlled vocabulary for the anatomy of Zea mays.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.phk7dd
title: FAIRsharing record for: C. elegans gross anatomy
title: WB-BT

description: This FAIRsharing record describes:  A structured controlled vocabulary of the anatomy of Caenorhabditis elegans.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.8ajxrw
title: FAIRsharing record for: Neuroscience Domain Insight Graphs
title: neuDIGs

description: This FAIRsharing record describes:  Neuroscience Domain Insight Graphs (neuDIGs) was created to serve the needs of systems-level neuroscience: an advanced, complex scientific subject. The goal is to provide a large-scale, practical, common representation for neuroscientific knowledge that is primarily concerned with properties and characteristics of neuron populations that may (or may not) be explicitly identified by name.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.a0r156
title: FAIRsharing record for: Ontology of Glucose Metabolism Disorder
title: OGMD

description: This FAIRsharing record describes:  Ontology of Glucose Metabolism Disorder includes disease names, phenotypes and their classifications involved in Glucose Metabolism Disorder, Diabetes. It must be used with other two ontologies, in the case of Diabetes: the Ontology of Geographical Region (OGR) and the Ontology for Genetic Disease Investigations (OGDI). Together, these three ontologies form the Ontology for Genetic Susceptibility Factor (OGSF), which is the project where information about this ontology is stored.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.901nkj
title: FAIRsharing record for: National Drug File
title: NDFRT

description: This FAIRsharing record describes:  The National Drug File Reference Terminology contains a novel reference hierarchy to describe physiologic effects (PE) of drugs.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.yadswh
title: FAIRsharing record for: FAIR Maturity Indicator Gen2-MI-R1.1
title: null

description: This FAIRsharing record describes:  The FAIR Maturity Indicator Gen2-MI-R1.1 Maturity Indicator measures the presence of a pointer in the metadata to the data license. Data that does not have a license cannot (legitimately) be reused, since the conditions of that reuse are not known.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.17zapb
title: FAIRsharing record for: Xenopus Anatomy Ontology
title: XAO

description: This FAIRsharing record describes:  The Xenopus Anatomical Ontology (XAO) describes Xenopus anatomy and embryological development using a 'controlled vocabulary' of anatomy terms that are organized in an hierarchy with a graphical structure. XAO terms describe gene expression, and the XAO is constantly being updated in response to the latest published Xenopus research.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.21gwxs
title: FAIRsharing record for: WHO Adverse Reaction Terminology
title: WHO-ART

description: This FAIRsharing record describes:  The World Health Organization Adverse Drug Reaction Terminology (WHO-ART) was developed and maintained by the WHO Collaborating Centre for International Drug Monitoring Uppsala Monitoring Centre (UMC). The WHO-ART collection is used for coding clinical information related to adverse drug reactions as a standardization collection of vocabulary/terminology for adverse reactions. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.dfmgzw
title: FAIRsharing record for: FAIR Maturity Indicator Gen2-MI-A1.1
title: null

description: This FAIRsharing record describes:  The FAIR Maturity Indicator Gen2-MI-A1.1 measures if the resolution protocol is universally implementable with an open protocol. Protocols that are closed source or that have royalties associated with them could prevent users from being able to obtain the resource.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.