cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/s5j5gzr2vc.2
title: SASSED

description: Approved for Public Release; distribution is unlimited.

Dataset title: Synthetic Aperture Sonar Seabed Environment Dataset (SASSED)

Date: June 2018

Description: This dataset contains 129 complex-valued, single (high frequency) channel, 1001x1001 pixel, synthetic aperture sonar snippets of various seafloor texture types. Each snippet contains one or more seabed environments, e.g., hardpack sand, mud, sea grass, rock, and sand ripple.

For each snippet there is a corresponding hand-segmented and -labeled "mask" image. The labels should not be interpreted as the ground truth for specific seafloor types. The labels were not verified by visual inspection of the actual seafloor environments or by any other method. Instead, interpret the labels as groupings of similar seafloor textures. Example code for preprocessing the data is included.

The data is stored in hdf5 format. The SAS data is stored under the hdf5 dataset 'snippets', and the hand-segmented labels are stored under 'labels'. For information on how to read hdf5 data, please visit one of the following websites: (general) https://support.hdfgroup.org/HDF5/ (python) https://www.h5py.org

Acknowledgements: Thanks go to J. Tory Cobb for curating this dataset. Please credit NSWC Panama City Division in any publication using this data.

Past Usage: Cobb, J. T., & Zare, A. (2014). Boundary detection and superpixel formation in synthetic aperture sonar imagery. Proceedings of the Institute of Acoustics, 36(Pt 1).

Approved for Public Release; distribution is unlimited.
DOI: 10.17632/s5j5gzr2vc.3
title: Synthetic Aperture Sonar Seabed Environment Dataset (SASSED)

description: Approved for Public Release; distribution is unlimited.

Dataset title: Synthetic Aperture Sonar Seabed Environment Dataset (SASSED)

Date: June 2018

Description: This dataset contains 129 complex-valued, single (high frequency) channel, 1001x1001 pixel, synthetic aperture sonar snippets of various seafloor texture types. Each snippet contains one or more seabed environments, e.g., hardpack sand, mud, sea grass, rock, and sand ripple.

For each snippet there is a corresponding hand-segmented and -labeled "mask" image. The labels should not be interpreted as the ground truth for specific seafloor types. The labels were not verified by visual inspection of the actual seafloor environments or by any other method. Instead, interpret the labels as groupings of similar seafloor textures. Example code for preprocessing the data is included.

The data is stored in hdf5 format. The SAS data is stored under the hdf5 dataset 'snippets', and the hand-segmented labels are stored under 'labels'. For information on how to read hdf5 data, please visit one of the following websites: (general) https://support.hdfgroup.org/HDF5/ (python) https://www.h5py.org

Acknowledgements: Thanks go to J. Tory Cobb for curating this dataset. Please credit NSWC Panama City Division in any publication using this data.

Past Usage: Cobb, J. T., & Zare, A. (2014). Boundary detection and superpixel formation in synthetic aperture sonar imagery. Proceedings of the Institute of Acoustics, 36(Pt 1).

Approved for Public Release; distribution is unlimited.
DOI: 10.17632/2b2p75vbn7.1
title: Data used in paper

description: The file includes all the basic data used in our paper, such as, NdFeB trade data, GDP per capita growth rate and life expectancy per capita.
DOI: 10.17632/9bdfp42tj3.1
title: dataset on health care utilization

description: This dataset results from gathering demographic and health care utilization data among 400 patients with type 2 diabetes living in Tabriz, Iran slums.
DOI: 10.17632/b9tx3bgkct.1
title:  PERFORMANCE OF PREGNANT WEST AFRICAN DWARF GOATS FED GUINEA GRASS BASAL DIET AND CASSAVA PEEL AND LEAF MEAL BASED CONCENTRATE

description: This study evaluated the performance of pregnant WAD goats fed Guinea grass basal diet and cassava peel and leaf meal based concentrate supplement. Twelve (12) West African dwarf goats (does) after their second parity with average weight (19.378 ± 2.30 kg) (mean ± SD) were used. Goats with undesired features such as supernumerary teats, mange, desired characteristics were separated. Three pregnant does were randomly allocated in a completely randomized design (CRD), to the one of the four (4) experimental treatments of Guinea grass basal diets and concentrate supplements at 50 %. The hypothesis was that dietary inclusion of cassava leaves and peels at different levels would or would not affect the performance of pregnant goats.The control (T1) was compounded from conventional feed ingredients (wheat offal, palm kernel cake and other feed ingredients) which are expensive and not easily assessable to the local goat farmers who are in control of a larger population of West African dwarf goats. The other treatments (2, 3 and 4) were compounded by replacing the wheat offal and palm kernel cake with cassava peel meal and cassava leaf meal respectively at graded levels. Cassava peel and leaf meal are high energy and crude protein respectively and values are comparable to those of wheat offal and PKC. The diets were T1 (control), T2 (25 % replacement of wheat offal (WO) and Palm kernel cake (PKC), with cassava peel meal (CPM) and cassava leaf meal (CLM) respectively, T3 (50 % replacement of WO and PKC, with CLM and CPM respectively) and T4 (75 % replacement of WO and PKC, with CLM and CPM respectively). Feed was offered at 50 g DM /Kg BW and water was given ad lib. Feed intake, weight changes, feed conversion ratio, digestibility were monitored for pregnant goats. Dry matter intake from grass likewise concentrate was non – significant across the four treatments. Although, the observed variation was not significant, the total DM intakes of pregnant does fed diets of replacement of WO and PKC with CPM and CLM were higher than that of the control, apart from T2, and the values ranged from 588.60, 555.12, 610.36 and 617.63 g/d for TI, T2, T3 and T4 respectively. The highest weight gain was recorded in pregnant goats fed 50 % replacement of wheat offal and PKC with CPM and CLM (T3), while the lowest was in T4 (75 % replacement with CPM and CLM). Furthermore, the replacement levels in the respective treatments did not affect apparent digestibility of DM (which was above 80 % for the four treatments), CP (which increased non – significantly with increase in CLM content of the diet), EE, NDF, ADF and HMC of the pregnant WAD goats significantly. However, apparent digestibility of ash was significantly lowest in the control and highest in the diets replaced with CPM and CLM. This investigation has shown wheat offal and PKC can be replaced at 25 %, 50 % and 75 %, without negative effect on foetal development and successful gestation.
DOI: 10.17632/96f3rhk4c9.1
title: LINF_320007600

description: protein kinase domain-containing protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/3zprypcp9h.1
title: LINF_320007400

description: dynein light chain LC8
Leishmania infantum (strain JPCM5)
DOI: 10.17632/fnxgxgmcbr.1
title: Supplemental table 1. Pemphigus Disease Area Index scores by prior suggested cutoff scores.

description: Pemphigus Disease Area Index (PDAI) scores by prior suggested cutoff scores.
DOI: 10.17632/kv3xxrnv2z.1
title: Proteomic Databases for Manduca-Cotesia study

description: These are the .FASTA sequences used with MaxQuant for protein identification in the supraesophageal, and subesophageal ganglia of Manduca sexta parasitized by Cotesia congregata. 
They were also used to identify proteins in the salivary glands of larval C. congregata.
DOI: 10.17632/7hcw5y2rs7.1
title: Comparison of Sequential, MLP, LSTM and Sequential Manned Machine Learning Methods for Producing Global Zenith Wet Delay

description: Output for 8 methods:
Sequential, MLP, LSTM and five Hybrid Scenarios (SQL-PSO-10, SQL-PSO-20, SQL-PSO-30, SQL-PSO-40, SQL-PSO-50).
It contains validating and predicted data+ plot for each of the 505 Globally distributed stations.
DOI: 10.17632/snpmrt8fj3.2
title: Adaptations in nucleus accumbens neuron subtypes mediate negative affective behaviors in fentanyl abstinence: Gene expression analysis

description: For RNA sequencing, only samples with RNA integrity numbers >8 were used. 6 samples/sex/drug/cell-type were submitted for RNA sequencing at the UMSOM Institute for Genome Sciences (IGS) and processed as described previously (Engeln et al., 2020). Libraries were prepared from 10 ng of RNA from each sample using the Smart-Seq v4 kit (Takara). Samples were sequenced on an Illumina HiSeq 4000 with a 75 bp paired-end read. An average of 64–100 million reads were obtained for each sample. Reads were aligned to the mouse genome (Mus_musculus.GRCm38) using TopHat (version 2.0.8; maximum number of mismatches =  2; segment length =  30; maximum multi-hits per read =  25; maximum intron length =  50,000). The number of reads that aligned to the predicted coding regions was determined using HTSeq. We applied two strategies to characterize gene expression changes in these data. First, we sought to identify individual genes with significant gene expression changes following abstinence from fentanyl. We used limma-trend to fit log2-normalized read counts per million to a linear model and tested for significant effects of fentanyl in each cell type, separately in males and in females, as well as treating sex as a covariate. Second, we characterized the effects of fentanyl on gene co-expression networks. As a starting point for this analysis, we used limma-trend to select the set of genes that exhibited a nominally-significant effect (p-value < 0.05) of fentanyl, sex, or cell type. We then used weighted gene co-expression network analysis (WGCNA) to characterize co-expressed modules among these genes, separately within D1 and D2 MSNs. Module detection was performed with the blockwiseModules() function with power = 10, corType = ‘bicor’, networkType = ‘signed’, minModuleSize = 25, reassignThreshold = 0, mergeCutHeight = 0.25, minMEtoStay = 0, and otherwise default parameters. We tested for differential expression of module eigengenes with limma, using posthoc contrasts to estimate effects of fentanyl while adjusting for sex differences, as above. Hub genes for each module were defined by calculating the Pearson correlation between the eigengene and each gene in the module.
DOI: 10.17632/zd86wmkmb4.1
title: Underrepresentation of Skin of Color in Dermatology Grand Rounds Cases: A Single-Center Retrospective Study

description: Supplementary Table 1. Fitzpatrick types of patients presented at University of Pennsylvania Department of
Dermatology Grand Rounds, 2015-2019

Supplementary Table 2: Fitzpatrick types of images per diagnostic category
DOI: 10.17632/bmv6msg2dc.1
title: Automobile Product Recalls

description: Data about automobile product recalls
DOI: 10.17632/cmrrccbmdh.1
title: College Students' Career Adaptability, Cognitive Emotion Regulation,  and Career Decision-making Self-efficacy

description: The data were collected from college students who were enrolled in a nationwide panel of a data collecting institute in December 2020 in South Korea. 
The data set includes the item-level and composite-level data of cognitive emotion regulation, career adaptability, and career decision-making self-efficacy in addition to the demographic information, such as gender, major, and job-seeking status. The information related to each variable is available in the provided code book.
DOI: 10.17632/bsn7bzs6fj.1
title: MSR1 characterized by chromatin accessibility mediates M2 macrophage polarization to promote gastric cancer progression

description: The  raw data and code  for  bioinformatics analysis in this study.
DOI: 10.17632/bsn7bzs6fj.2
title: MSR1 characterized by chromatin accessibility mediates M2 macrophage polarization to promote gastric cancer progression

description: The  raw data and code  for  bioinformatics analysis in this study.
DOI: 10.17632/7gd6743trm.1
title: Simultaneous quantification of Hg (II) and Pb (II) by square wave anodic stripping voltammetry using Bi/graphite electrode

description: These data show the cyclic voltammograms (CV) of a Bi/graphite electrode synthesized with different conditions (Bi (III) concentration and deposition time (s)) in order to evaluate the best conditions by means of a Design of Experiments (DOE). The performance of this electrode was tested by means of a series of Square Wave Anodic Stripping Voltammetry (SWASV) at different concentrations of Hg (II) and Pb (II), where the linear relationship between the concentration of these heavy metals and the current measured in uA was demonstrated. In conclusion, an excellent performance of the synthesized electrode was demonstrated in terms of selectivity and sensitivity, achieving detection limits of 1 ppb and 10 ppb for Hg (II) and Pb (II), respectively.
DOI: 10.17632/5hpvdtjpvf.1
title: Using Artificial Intelligence to Analyze Publicly Available Social Media Posts to Understand Patient Perspectives Towards Specific Treatments of Alopecia Areata

description: Statistical analysis plan
DOI: 10.17632/jk2zg3by3c.1
title: Seasonal variation of aphids on cabbage

description: Raw field data for aphid and predator (Syrphid, spiders, and coccinellids) densities on cabbage, and weather data in two agroecological zones of Ghana, collected over two years for five cropping seasons.
DOI: 10.34740/kaggle/dsv/4140473
title: Tales from the Pizza Guy
DOI: 10.5281/zenodo.7546512
title: Dataset: Complete Genome Sequences of Sathuperi and Shamonda viruses isolated in Japan

description: This file contains supplementary information corresponding to the manuscript: "Complete Genome Sequences of Sathuperi and Shamonda viruses isolated in Japan".
DOI: 10.5281/zenodo.7546511
title: Dataset: Complete Genome Sequences of Sathuperi and Shamonda viruses isolated in Japan

description: This file contains supplementary information corresponding to the manuscript: "Complete Genome Sequences of Sathuperi and Shamonda viruses isolated in Japan".
DOI: 10.21227/85en-1709
title: Sepsis_Working_Dataset

description: The dataset included 640 patients' vital records, which ranged in age from 18 to 60.
DOI: 10.34740/kaggle/dsv/4867211
title: Elon Musk Tweets
DOI: 10.13012/b2idb-8012140_v1
title: Data from: Chemistry Across Multiple Phases (CAMP) version 1.0: An integrated multi-phase chemistry model

description: This dataset contains all the data for the results section in the study presented in the paper entitled "Chemistry Across Multiple Phases (CAMP) version 1.0: An integrated multi-phase chemistry mode" submitted to Geoscientific Model Development (GMD). In this paper, two sets of simulations were run to test CAMP with this results included here. This consists of (1) box model inputs and outputs presented in Section 4.2 for modal, binned and particle-resolved simulations to compare the application of identical chemical mechanisms to different aerosol representations and (2) the 3D Eulerian output presented in Section 4.3.
DOI: 10.5066/p9dgi5f5
title: Polyacrylamide gel electrophoresis results with thiaminase activity stain of recombinant putative thiaminases expressed in E. coli

description: Data describe results of a set of laboratory experiments using polyacrylamide gel electrophoresis with a thiaminase activity stain to test the solubility and thiaminase activity of recombinant putative thiaminases expressed in E. coli. Parameters described include the presence and relative mobility of thiaminases, and the presence and relative mobility of recombinant proteins. Experiments were conducted at the USGS Columbia Environmental Research Center, Columbia, MO in 2012 and 2013.
DOI: 10.5281/zenodo.3714708
title: ANGUSII Scenarios: Pathways to 100% Renewable German Energy System

description: The data set contains an open source energy system model based on the Open Energy Modelling Framework (oemof) for Germany. Results are calculated for different scenarios for the year 2030, 2040 and 2050. A documentation file can be found on Github.
description: The work has been funded by the Federal Ministry of Economic Affairs, Germany
DOI: 10.5281/zenodo.7254119
title: Empirical optimal localization / Vertical covariance localization

description: Data and code / Necker et al. 2022 - "Guidance on how to improve vertical covariance localization based on a 1000-member ensemble"<br> Revised version (R2) of the code and results after reviews
DOI: 10.6084/m9.figshare.12818807.v1
title: Air qaulity in recent years.zip

description: Surface air quality in 74 major cities of China in recent years.
DOI: 10.6084/m9.figshare.155878
title: Mobile Applications for Open Displays Networks - Coded Research Papers

description: List of research papers that were coded in MaxQDA for the paper “Mobile Applications for Open Displays Networks”, submitted to PerDis 2013.
DOI: 10.6084/m9.figshare.21209360.v1
title: DTW Raw Data

description: Raw data for replicating the DTW analysis in Barbour et al (in review). Consists of individual dives (dive depths over time) for turtles in list form, saved to an R (.rda) object that can be directly loaded into the R environment and used with example code on the corresponding author's Github repository.
DOI: 10.5683/sp2/slpqaa
title: Data from: Assessing the potential of genotyping-by-sequencing-derived single nucleotide polymorphisms to identify the geographic origins of intercepted gypsy moth (Lymantria dispar) specimens: a proof-of-concept study

description: AbstractForest invasive alien species are a major threat to ecosystem stability and can have enormous economic and social impacts. For this reason, preventing the introduction of Asian gypsy moths (AGM; Lymantria dispar asiatica and L. d. japonica) into North America has been identified as a top priority by North American authorities. The AGM is an important defoliator of a wide variety of hardwood and coniferous trees, displaying a much broader host range and an enhanced dispersal ability relative to the already established European gypsy moth (L. d. dispar). Although molecular assays have been developed to help distinguish gypsy moth subspecies, these tools are not adequate for tracing the geographic origins of AGM samples intercepted on foreign vessels. Yet, this type of information would be very useful in characterizing introduction pathways and would help North American regulatory authorities in preventing introductions. The present proof-of-concept study assessed the potential of single nucleotide polymorphism (SNP) markers, obtained through genotyping-by-sequencing (GBS), to identify the geographic origins of gypsy moth samples. The approach was applied to eight laboratory-reared gypsy moth populations, whose original stocks came from locations distributed over the entire range of L. dispar, comprising representatives of the three recognized subspecies. The various analyses we performed showed strong differentiation among populations (Fst ≥ 0.237), enabling clear distinction of subspecies and geographic variants, while revealing introgression near the geographic boundaries between subspecies. This strong population structure resulted in 100% assignment success of moths to their original population when 2327 SNPs were used. Although the SNP panels we developed are not immediately applicable to contemporary, natural populations because of distorted allele frequencies in the laboratory-reared populations we used, our results attest to the potential of genome-wide SNP markers as a tool to identify the geographic origins of intercepted gypsy moth samples.
DOI: 10.6084/m9.figshare.21208118.v1
title: CNN_trainingdata.zip

description: This is the training dataset used for the image classification convolutional neural network (CNN). We used a pre-trained model (ResNet-34) and transfer learning to sort our data into 5 classes. Model was run in Python using the "fast.ai" package.
DOI: 10.1285/i24212113v5i2p19
title: How psychiatric referrals influence stigmatization in patients with myalgic encephalomyelitis and chronic fatigue syndrome: An examination of American and British models

description: Myalgic encephalomyelitis (ME) and chronic fatigue syndrome (CFS) are controversial chronic illnesses with a myriad of debilitating symptoms. This study aimed to explore physician referrals to psychiatrists or psychologists, perceived stigma, and estrangement for patients with ME and CFS. Findings indicate that patients who have been referred to psychiatrists are likely to perceive illness stigma and feel estranged from others due to their illness. These relationships are moderated by the country of residence, the United States and the United Kingdom. The implications of physician referrals for people with ME and CFS are discussed.
DOI: 10.14459/2022mp1647482
title: ALPACA - Adaptive Level-set PArallel Code Alpaca

description: A multiresolution compressible multiphase flow solver developed at Prof. Adams' Chair of Aerodynamics and Fluid Mechanics (AER), Technical University of Munich.
DOI: 10.17632/82hv54pzrd.1
title: Relating carbon and energy intensity of best performing retailers with policy, strategy and building practice

description: Data collected in retailers’ CSR reports was organized in different tables for food retailers and for non-food retailers, according to the variables policy, strategy and building practice. In total, 31 best performing retailers were analysed (18 food retailers and 13 non-food retailers) against 27 worst performing retailers (17 food retailers and 10 non-food retailers). This dataset comprises the original grids used to code all of retailers analysed data. Data organization was made the following way: CSR/sustainability reports were searched for recurring themes, which were recorded under each variable’s table, to identify core consistencies and meanings (i.e. patterns). These patterns where then sorted into categories, according to internal heterogeneity and external heterogeneity. They were also validated by all authors to be reasonably inclusive of the analysed data as to cover our research questions. Hence, for each variable, data were organized according to the most general category that could embrace each of the identified listed measures.
DOI: 10.17632/gnygmhvv8d.1
title: Combined carbon and energy intensity benchmarks for sustainable retail stores - CSR Reports

description: The data refers to the highest revenue retailers’ CSR reports in which energy intensity (EI) and carbon intensity (CI) information used for the research paper "Combined carbon and energy intensity benchmarks for sustainable retail stores" can be found.
DOI: 10.17632/ypvc8p99cb.1
title: Dataset for: Effective Logic Synthesis Flow for Threshold Logic Circuit Design

description: This dataset comprises all the necessary data to reproduce the obtained results presented in the manuscript entitled "Effective Logic Synthesis Flow for Threshold Logic Circuit Design".
DOI: 10.21227/qvb4-my14
title: Spectrum dataset under different pressures

description: 1.The dataset is the spectrum acquired by using 0.4/0.6-m long SHF.2.There are 51 different pressure states from 0 MPa to 5 MPa.3.For each pressure state, more than 130 spectra are collected.4.In each spectrum, the value of the first row should be deleted. 5.The first col of each spectrum is the wavelength, and the second col is the intensity.6.The size of each spectrum is (508, 1)