cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.12721877
title: Basque Country DATASET

description: This dataset is associated with the following publication:



Recuero-Virto, N., & Recuero-Virto, N. (2024). Food tourism to revitalize the Basque Country. Heliyon, 10(11), e31279. https://doi.org/10.1016/j.heliyon.2024.e31279


For more information, please visit: https://doi.org/10.1016/j.heliyon.2024.e31279
DOI: 10.5281/zenodo.12721507
title: Effect of a laser heat treatment on the thickness distribution of AZ31B Mg Alloy Truncated Cone obtained via Superplastic Forming

description: Thickness distribution of a Mg alloy (AZ31B) truncated cone obtained by means of the superplastic forming process (SPF) starting both from the alloy in the As Received condition and after a localised laser heat treatment, using different initial blank diameters and radii of the laser trajectory
DOI: 10.5281/zenodo.12721508
title: Effect of a laser heat treatment on the thickness distribution of AZ31B Mg Alloy Truncated Cone obtained via Superplastic Forming

description: Thickness distribution of a Mg alloy (AZ31B) truncated cone obtained by means of the superplastic forming process (SPF) starting both from the alloy in the As Received condition and after a localised laser heat treatment, using different initial blank diameters and radii of the laser trajectory
DOI: 10.15468/dl.zq75th
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Thailand, Cambodia, Viet Nam, Myanmar, Malaysia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Dipterocarpus intricatus Dyer"
 ]
}

 The dataset includes 41 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020453-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kp3atz
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Thailand, Cambodia, Viet Nam, Myanmar, Malaysia, Lao People’s Democratic Republic)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Dipterocarpus intricatus Dyer"
 ]
}

 The dataset includes 45 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020455-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vk378w
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "not" : {
 "TaxonKey" : [
 "is one of (Caulerpa J.V.F.Lamouroux, 1809)"
 ]
 }
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020448-240626123714530/datasets/export for details.
DOI: 10.15468/dl.rm7xse
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Thailand",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Amorphophallus atroviridis Hett.",
 "Year 2000-2024"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020456-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xmgemq
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-41.73568 26.73782,-4.94501 26.73782,-4.94501 47.2361,-41.73568 47.2361,-41.73568 26.73782))",
 "TaxonKey is Pseudoscopelus obtusifrons (Fowler, 1934)"
 ]
}

 The dataset includes 13 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020457-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6qs52e
title: Occurrence Download

description: A dataset containing 59557 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Acacia dealbata Link"
 ]
}

 The dataset includes 59557 records from 367 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020458-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hgmvt8
title: Occurrence Download

description: A dataset containing 1630 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Korea, Republic of)",
 "Geometry POLYGON((106.76332 20.70552,110.86823 18.79208,121.83709 22.25073,136.16578 34.40541,141.10671 47.05419,125.88865 51.8963,83.59431 48.7341,71.14317 42.3109,77.53267 31.88479,101.10109 32.27195,103.18208 32.41714,105.79542 32.02998,107.9732 32.02998,110.48974 32.02998,111.8932 32.41714,114.79691 32.07837,114.9421 30.62652,112.86111 30.8685,109.23147 30.14257,109.909 28.40034,108.02159 25.06108,105.16628 23.27046,106.76332 20.70552))",
 "TaxonKey is Ziziphus jujuba Mill."
 ]
}

 The dataset includes 1630 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020460-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.7840303
title: Potential impact of assimilating visible and infrared satellite observations compared to radar reflectivity for convective‐scale NWP

description: Contains



	
raw_data
	

		
nature run initial conditions for the cases "random" and "warm-bubble"
		
ensemble initial condition sounding profiles
	
	
	
evaluation_metrics
	

		
csv files of FSS, RMSE, MAE, ensemble spread, mean difference
		to reproduce figures of FSS, RMSE and spread in the paper and more.
		See the README.txt
	
	
	
figures
	

		
Map_VIS06 ... Simulated satellite images of visible reflectance for ensemble members and truth
		
Map_VIS06_probability ... Map of ensemble probability for visible reflectance > 0.6 and the nature in red contours
DOI: 10.5281/zenodo.7840304
title: Potential impact of assimilating visible and infrared satellite observations compared to radar reflectivity for convective‐scale NWP

description: Contains



	
raw_data
	

		
nature run initial conditions for the cases "random" and "warm-bubble"
		
ensemble initial condition sounding profiles
	
	
	
evaluation_metrics
	

		
csv files of FSS, RMSE, MAE, ensemble spread, mean difference
		to reproduce figures of FSS, RMSE and spread in the paper and more.
		See the README.txt
	
	
	
figures
	

		
Map_VIS06 ... Simulated satellite images of visible reflectance for ensemble members and truth
		
Map_VIS06_probability ... Map of ensemble probability for visible reflectance > 0.6 and the nature in red contours
DOI: 10.15468/dl.9veqka
title: Occurrence Download

description: A dataset containing 21501 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Acacia decurrens Willd."
 ]
}

 The dataset includes 21501 records from 154 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020461-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3sk5kk
title: Occurrence Download

description: A dataset containing 4455 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Natator depressus (Garman, 1880)",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2014"
 ]
}

 The dataset includes 4455 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020462-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sgbbw6
title: Occurrence Download

description: A dataset listing the 4014230 species recorded in GBIF matching the query:
{ }

 The dataset's 4014230 records were derived from 74882 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020445-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xtuam9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "not" : {
 "TaxonKey" : [
 "is one of (Posidonia oceanica (L.) Delile)"
 ]
 }
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020459-240626123714530/datasets/export for details.
DOI: 10.15468/dl.zs2aws
title: Occurrence Download

description: A dataset containing 141980386 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 1979-2024"
 ]
}

 The dataset includes 141980386 records from 1046 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020454-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zw8nbh
title: Occurrence Download

description: A dataset containing 23692 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Syricoris lacunana (Denis & Schiffermüller), 1775",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 23692 records from 166 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020351-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rd8qyw
title: Occurrence Download

description: A dataset containing 182193 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Bubo scandiacus (Linnaeus, 1758)"
 ]
 },
 "HasCoordinate is TRUE",
 "Year is greater than or equal to 2010",
 "Year is less than or equal to 2023",
 "DecimalLatitude is greater than or equal to 24.1271113347408",
 "DecimalLatitude is less than or equal to 56.572699215132005",
 "DecimalLongitude is greater than or equal to -89.31544323258166",
 "DecimalLongitude is less than or equal to -51.73636965516586",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 182193 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020315-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rzdyd5
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pipa aspera Müller, 1924"
 ]
}

 The dataset includes 86 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020352-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13946247
title: Meta-analysis of scRNA-seq Co-expression in Human Neural Organoids Reveals High Variability in Recapitulating Primary Tissue

description: Contains all code and data for Werner and Gillis, Meta-analysis of scRNA-seq Co-expression in Human Neural Organoids Reveals High Variability in Recapitulating Primary Tissue, 2024. 

Additionally, the code and data for this paper can be found at https://github.com/JonathanMWerner/meta_organoid_analysis with an easy to view github markdown file containing all the code used to generate all figure panel plots at https://github.com/JonathanMWerner/meta_organoid_analysis/blob/main/figure_plots_with_data_code.md.

Due to file size limits on github, there are several data files not available on github, but are available here on zenodo in the data_for_plots.zip file, see below:

umap_embeddings_Fig2A.Rdatacross_dataset_aggregated_exp_metaMarker_all_fetal_SuppFig1B_Fig2E.Rdataorganoid_egad_results_ranked_6_26_24_Fig3D.Rdatafetal_egad_results_ranked_6_26_24_Fig3D.Rdataorg_eigenvec_matrices_SuppFig3CD.Rdata

The R package developed for this paper is available at https://github.com/JonathanMWerner/preservedCoexp
DOI: 10.5281/zenodo.13946248
title: Meta-analysis of scRNA-seq Co-expression in Human Neural Organoids Reveals High Variability in Recapitulating Primary Tissue

description: Contains all code and data for Werner and Gillis, Meta-analysis of scRNA-seq Co-expression in Human Neural Organoids Reveals High Variability in Recapitulating Primary Tissue, 2024. 

Additionally, the code and data for this paper can be found at https://github.com/JonathanMWerner/meta_organoid_analysis with an easy to view github markdown file containing all the code used to generate all figure panel plots at https://github.com/JonathanMWerner/meta_organoid_analysis/blob/main/figure_plots_with_data_code.md.

Due to file size limits on github, there are several data files not available on github, but are available here on zenodo in the data_for_plots.zip file, see below:

umap_embeddings_Fig2A.Rdatacross_dataset_aggregated_exp_metaMarker_all_fetal_SuppFig1B_Fig2E.Rdataorganoid_egad_results_ranked_6_26_24_Fig3D.Rdatafetal_egad_results_ranked_6_26_24_Fig3D.Rdataorg_eigenvec_matrices_SuppFig3CD.Rdata

The R package developed for this paper is available at https://github.com/JonathanMWerner/preservedCoexp
DOI: 10.15468/dl.5hbtqs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Bactra lanceolana Hübner, 1825",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020354-241007104925546/datasets/export for details.
DOI: 10.15468/dl.wx6tdd
title: Occurrence Download

description: A dataset containing 468 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pipa carvalhoi (Miranda-Ribeiro, 1937)"
 ]
}

 The dataset includes 468 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020355-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.73hm74
title: Occurrence Download

description: A dataset containing 1574 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Geometry POLYGON((-74.9218 2.92561,-74.92642 2.92253,-74.94299 2.92715,-74.95186 2.93486,-74.9665 2.90326,-74.97768 2.88515,-74.98577 2.89671,-75.027 2.83544,-75.04318 2.81849,-75.06476 2.80423,-75.0744 2.77802,-75.08442 2.75606,-75.15331 2.74178,-75.15871 2.73099,-75.19802 2.69092,-75.18183 2.67011,-75.13288 2.69092,-75.15265 2.70457,-75.14512 2.72434,-75.1277 2.72952,-75.08582 2.72905,-75.05334 2.75493,-75.02463 2.79682,-74.99404 2.84577,-74.94933 2.88624,-74.9218 2.92561))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 1574 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020356-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5284/1118640
title: Digital Report from a Level 2 Building Recording Survey at 32 High Street, Silverstone, Northamptonshire, 2023

description: This archive contains a report on the Level 2 building record as defined by Historic England on the Barn at 32 High St, Silverstone, Northamptonshire. This record has taking place in advance of conversion works to the barn at 32 High St, which although have been carefully designed to retain the significant historic fabric will create change to the building. This report is as advised by the Archaeological Advisor to West Northamptonshire council.
DOI: 10.15468/dl.wnvy7d
title: Occurrence Download

description: A dataset containing 707 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Ancylis geminana (Donovan, 1806)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 707 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020358-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aywn7w
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pristimantis pleurostriatus (Rivero, 1984)"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020359-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15482/usda.adc/27229290
title: <b>Absorption of visible light by floral anthocyanins increases flower temperatures: implications for a warmer world</b>

description: With rising global temperatures, understanding the mechanisms that influence plant thermal energy balance are critical to forecasting plant and pollinator responses. Flower temperatures impact visitation by insect pollinators, and several temperature-sensitive processes central to plant reproduction. Anthocyanin pigments absorb strongly in visible and ultraviolet wavebands, but clear support for a warming effect of pigments on flowers has remained elusive. We used infrared imaging to measure petal temperatures of horticultural varieties of plants differing in floral anthocyanin content. Excised sets of flowers were mounted perpendicularly to the sun, and exposed to direct ambient sunlight filtered either through Aclar (UV-transparent) or Courtguard (UV-opaque) under low-wind (&lt; 1 m s-1) conditions. Petal temperatures were measured after one minute, and treatment order alternated between replicates. Results showed that pigmented flowers were consistently significantly warmer than white conspecifics (2.9°C warmer on average for lightly-pigmented varieties, 5.3°C warmer for darkly-pigmented). Most species showed no significant difference in petal temperatures under UV inclusion versus exclusion, indicating most warming by anthocyanins can be attributed to absorption of visible light. UV-enhanced warming was observed in some species, which could be due to the presence of side groups that enhance UV-absorption by the anthocyanin molecules. However, these differences were slight (always &lt;1°C), and usually white varieties exhibited differences as well, suggesting other flavonoids too may contribute to floral warming. Additional experiments focusing on dark pink and white varieties of Impatiens x hybrida corroborated previous reports that the most dramatic warming effects occur under high-light, low-wind conditions. In the context of climate change, warmer temperatures could potentially drive the replacement of darkly-colored flowers with more lightly-colored morphs (or species), especially if flower temperatures exceed thermal maxima for fertilization and seed development. This pressure may be especially strong in species with floral morphologies conducive to heat trapping or in low-wind environments (e.g., growing in dense stands or close to the ground). Changes in flower color could also potentially induce shifts in pollinator communities, which could have community-scale effects.
DOI: 10.15482/usda.adc/27229290.v1
title: <b>Absorption of visible light by floral anthocyanins increases flower temperatures: implications for a warmer world</b>

description: With rising global temperatures, understanding the mechanisms that influence plant thermal energy balance are critical to forecasting plant and pollinator responses. Flower temperatures impact visitation by insect pollinators, and several temperature-sensitive processes central to plant reproduction. Anthocyanin pigments absorb strongly in visible and ultraviolet wavebands, but clear support for a warming effect of pigments on flowers has remained elusive. We used infrared imaging to measure petal temperatures of horticultural varieties of plants differing in floral anthocyanin content. Excised sets of flowers were mounted perpendicularly to the sun, and exposed to direct ambient sunlight filtered either through Aclar (UV-transparent) or Courtguard (UV-opaque) under low-wind (&lt; 1 m s-1) conditions. Petal temperatures were measured after one minute, and treatment order alternated between replicates. Results showed that pigmented flowers were consistently significantly warmer than white conspecifics (2.9°C warmer on average for lightly-pigmented varieties, 5.3°C warmer for darkly-pigmented). Most species showed no significant difference in petal temperatures under UV inclusion versus exclusion, indicating most warming by anthocyanins can be attributed to absorption of visible light. UV-enhanced warming was observed in some species, which could be due to the presence of side groups that enhance UV-absorption by the anthocyanin molecules. However, these differences were slight (always &lt;1°C), and usually white varieties exhibited differences as well, suggesting other flavonoids too may contribute to floral warming. Additional experiments focusing on dark pink and white varieties of Impatiens x hybrida corroborated previous reports that the most dramatic warming effects occur under high-light, low-wind conditions. In the context of climate change, warmer temperatures could potentially drive the replacement of darkly-colored flowers with more lightly-colored morphs (or species), especially if flower temperatures exceed thermal maxima for fertilization and seed development. This pressure may be especially strong in species with floral morphologies conducive to heat trapping or in low-wind environments (e.g., growing in dense stands or close to the ground). Changes in flower color could also potentially induce shifts in pollinator communities, which could have community-scale effects.