cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.499mnt
title: Occurrence Download

description: A dataset containing 2497 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Russian Federation",
 "DatasetKey is one of (iNaturalist Research-grade Observations, Chronicle of Nature - Phenology of Plants of FSE Zapovednoe Podlemorye, Local floras of Russia: records from literature)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY-NC 4.0, CC-BY 4.0, CC0 1.0)",
 "TaxonKey is Achillea asiatica"
 ]
}

 The dataset includes 2497 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003463-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/9g2nkttsbm
title: Influence of pre-existing structures on the Cenozoic kinematic evolution of the Qilian Shan, northern Tibetan Plateau: Insights from analog modeling

description: The sandbox experimental data of “Influence of pre-existing structures on the Cenozoic kinematic evolution of the Qilian Shan, northern Tibetan Plateau: Insights from analog modeling”. The data includes photos of map-view and section-view of 0%, 5%, 15%, and 25% shortening for four experimental models, respectively.
DOI: 10.17632/9g2nkttsbm.2
title: Influence of pre-existing structures on the Cenozoic kinematic evolution of the Qilian Shan, northern Tibetan Plateau: Insights from analog modeling

description: The sandbox experimental data of “Influence of pre-existing structures on the Cenozoic kinematic evolution of the Qilian Shan, northern Tibetan Plateau: Insights from analog modeling”. The data includes photos of map-view and section-view of 0%, 5%, 15%, and 25% shortening for four experimental models, respectively.
DOI: 10.5061/dryad.4qrfj6qf6
title: Plant-soil feedbacks in sympatric Asclepias species

description: Plants affect associated biotic and abiotic edaphic factors, with
 reciprocal feedbacks from soil characteristics affecting plants. These
 two-way interactions between plants and soils are collectively known as
 plant-soil feedbacks (PSFs). The role of phylogenetic relatedness and
 evolutionary histories have recently emerged as a potential driver of
 PSFs, although the strength and direction of feedbacks among sympatric
 congeners is not well understood. We examined plant-soil feedback
 responses of Asclepias syriaca, a common clonal milkweed species, with
 several sympatric congeners across a gradient of increasing phylogenetic
 distances (A. tuberosa, A. viridis, A. sullivantii, and A. verticillata,
 respectively). Plant-soil feedbacks were measured through productivity and
 colonization by arbuscular mycorrhizal (AM) fungi. Asclepias syriaca
 produced less biomass in soils conditioned by the most phylogenetically
 distant species (A. verticillata), relative to conspecific-conditioned
 soils. Similarly, arbuscular mycorrhizal (AM) fungal colonization of A.
 syriaca roots was reduced when grown in soils conditioned by A.
 verticillata, compared to colonization in plants grown in soil conditioned
 by any of the other three Asclepias species, indicating mycorrhizal
 associations are a potential mechanism of observed positive PSFs. This
 display of differences between the most phylogenetically distant, but not
 close or intermediate, paring(s) suggest a potential phylogenetic
 threshold, although other exogenous factors cannot be ruled out. Overall,
 these results highlight the potential role of phylogenetic distance in
 influencing positive PSFs through mutualists.
DOI: 10.17632/7f3ndvdc87
title: Chromatography Files of the Complete Mitochondrial Genome of Pryeria sinica Moore, 1877 (Lepidoptera: Zygaenidae)

description: This dataset contains chromatography files from Sanger sequencing results fot the complete mitochondrial genome assembly of Pryeria sinica Moore, 1877 (Lepidoptera: Zygaenidae).
DOI: 10.5061/dryad.n2z34tn1c
title: Plastid genome random walks

description: A common genome composition pattern in eubacteria is an asymmetry between
 the leading and lagging strands resulting in opposite skew patterns in the
 two replichores that lie between the origin and terminus of replication.
 Although this pattern has been reported for a couple of isolated plastid
 genomes, it is not clear how widespread it is overall in this chromosome.
 Using a random walk approach, we examine plastid genomes outside of the
 land plants, which are excluded since they are known not to initiate
 replication at a single site, for such a pattern of asymmetry. Although it
 is not a common feature, we find that it is detectable in the plastid
 genome of species from several diverse lineages. The euglenozoa in
 particular show a strong skew pattern as do several rhodophytes. There is
 a weaker pattern in some chlorophytes but it is not apparent in other
 lineages. The ramifications of this for analyses of plastid evolution are
 discussed. This dataset contains the random walk plots for the genomes
 analyzed.
description: Genome sequences were downloaded from NCBI and analyzed as
 described in the paper.
DOI: 10.17632/7f3ndvdc87.1
title: Chromatography Files of the Complete Mitochondrial Genome of Pryeria sinica Moore, 1877 (Lepidoptera: Zygaenidae)

description: This dataset contains chromatography files from Sanger sequencing results fot the complete mitochondrial genome assembly of Pryeria sinica Moore, 1877 (Lepidoptera: Zygaenidae).
DOI: 10.5061/dryad.905qfttq6
title: Data from: Phenotypic clines in herbivore resistance and reproductive traits in wild plants along an agricultural gradient

description: The conversion of natural landscapes to agriculture is a leading cause of
 biodiversity loss worldwide. While many studies examine how landscape
 modification affects species diversity, a trait-based approach can provide
 new insights into species responses to environmental change. Wild plants
 persisting in heavily modified landscapes provide a unique opportunity to
 examine species' responses to land use change. Trait expression
 within a community plays an important role in structuring species
 interactions, highlighting the potential implications of landscape
 mediated trait changes on ecosystem functioning. Here we test the effect
 of increasing agricultural landscape modification on defensive and
 reproductive traits in three commonly occurring Brassicaceae species to
 evaluate plant responses to landscape change. We collected seeds from
 populations at spatially separated sites with variation in surrounding
 agricultural land cover and grew them in a greenhouse common garden,
 measuring defensive traits through an herbivore no-choice bioassay as well
 as reproductive traits such as flower size and seed set. In two of the
 three species, plants originating from agriculturally dominant landscapes
 expressed a consistent reduction in flower size and herbivore leaf
 consumption. One species also showed reduced fitness associated with
 increasingly agricultural landscapes. These findings suggest that wild
 plants are responding to landscape modification, highlighting that species
 diversity alone does not fully capture the effects of land use change.
DOI: 10.5061/dryad.0gb5mkm5c
title: Ultraconserved elements resolve the phylogeny and corroborate patterns of molecular rate variation in herons (Aves: Ardeidae)

description: Thoroughly sampled and well-supported phylogenetic trees are essential to
 taxonomy and to guide studies of evolution and ecology. Despite extensive
 prior inquiry, a comprehensive tree of heron relationships (Aves:
 Ardeidae) has not yet been published. As a result, the classification of
 this family remains unstable, and their evolutionary history remains
 poorly studied. Here, we sample genome-wide ultraconserved elements (UCEs)
 and mitochondrial DNA sequences (mtDNA) of &gt;90% of extant species
 to estimate heron phylogeny using a combination of maximum likelihood
 (ML), coalescent, and Bayesian inference (BI) methods. The UCE and mtDNA
 trees are mostly concordant with one another, providing a topology that
 resolves relationships among the five heron subfamilies and indicates that
 the genera Gorsachius, Botaurus, Ardea,
 and Ixobrychus are not monophyletic. We also
 present the first genetic data from the Forest Bittern Zonerodius
 heliosylus, an enigmatic species of New Guinea; our results suggest that
 it is a member of the genus Ardeola and not the
 Tigrisomatinae (tiger herons), as previously thought. Lastly, we compare
 molecular rates between heron clades in the UCE tree with those in
 previously constructed mtDNA and DNA-DNA hybridization trees. We show that
 rate variation in the UCE tree corroborates rate patterns in the
 previously constructed trees, i.e., that bitterns
 (Ixobrychus and Botaurus) evolved comparatively faster,
 and some tiger herons (Tigrisoma) and the Boat-billed Heron (Cochlearius)
 more slowly, than other heron taxa.
DOI: 10.17632/nhwbd36kbc
title: Relational Repair Human–GCA Interaction Dataset
DOI: 10.17632/nhwbd36kbc.1
title: Relational Repair Human–GCA Interaction Dataset
DOI: 10.5281/zenodo.14888684
title: SNSPD arrival-time histograms given varying incident mean photon numbers

description: The data set consists of arrival-time histograms from a trigger signal (fast photodiode, Thorlabs) to the rising edge of an SNSPD (Single Quantum) trace and was originally recorded in the form of raw time tags with a Time Tagger X (Swabian Instruments).In total 122 different coherent states were recorded (with 570000 samples each). The incident mean photon numbers per pulse scale linearly from 0 to 16 in steps of 1, quadratically from 25 to 10000 and then exponentially to approximately 68000. The histogramx-axis has units of picoseconds (from 0ps to 549ps in steps of 1ps).
description: Partially funded by the European Union (ERC, QuESADILLA, 101042399). Views and opinions expressed are however those of the author(s) only and do not necessarily reflect those of the European Union or the European Research Council Executive Agency. Neither the European Union nor the granting authority can be held responsible for them. This work has received funding from the German Ministry of Education and Research within the PhoQuant project (grant number 13N16103).
DOI: 10.5281/zenodo.14888685
title: SNSPD arrival-time histograms given varying incident mean photon numbers

description: The data set consists of arrival-time histograms from a trigger signal (fast photodiode, Thorlabs) to the rising edge of an SNSPD (Single Quantum) trace and was originally recorded in the form of raw time tags with a Time Tagger X (Swabian Instruments).In total 122 different coherent states were recorded (with 570000 samples each). The incident mean photon numbers per pulse scale linearly from 0 to 16 in steps of 1, quadratically from 25 to 10000 and then exponentially to approximately 68000. The histogramx-axis has units of picoseconds (from 0ps to 549ps in steps of 1ps).
description: Partially funded by the European Union (ERC, QuESADILLA, 101042399). Views and opinions expressed are however those of the author(s) only and do not necessarily reflect those of the European Union or the European Research Council Executive Agency. Neither the European Union nor the granting authority can be held responsible for them. This work has received funding from the German Ministry of Education and Research within the PhoQuant project (grant number 13N16103).
DOI: 10.17632/tk8hg2bds4
title: CEO Early-life Natural Disaster Experience and Corporate ESG Performance

description: This dataset combines CEO demographic information, natural disaster records, ESG ratings, and firm-level financial and governance variables. CEO information is obtained primarily from the China Stock Market & Accounting Research (CSMAR) database and supplemented by WIND database, the Chinese Research Data Services Platform (CNRDS), and the China Securities Information Platform (CNINF), along with manual verification using Python-based web searches. Natural disaster events—defined as incidents causing more than ten deaths—are obtained from the Emergency Events Database (EM-DAT), the National Institute of Natural Hazards, the Global Disaster Data Platform, and the International Federation of Red Cross and Red Crescent Societies, and matched to CEOs’ early-life locations. Corporate ESG performance is measured using the Huazheng ESG Ratings constructed by Sino-Securities Index Information Service (Shanghai) Co., Ltd. Financial and governance data are drawn from the CSMAR database. After excluding financial firms, special treatment firms, and firms with missing data, our final sample consists of 1,111 unique CEOs and 4,968 firm-year observations from 2009 to 2023.
DOI: 10.17632/tk8hg2bds4.1
title: CEO Early-life Natural Disaster Experience and Corporate ESG Performance

description: This dataset combines CEO demographic information, natural disaster records, ESG ratings, and firm-level financial and governance variables. CEO information is obtained primarily from the China Stock Market & Accounting Research (CSMAR) database and supplemented by WIND database, the Chinese Research Data Services Platform (CNRDS), and the China Securities Information Platform (CNINF), along with manual verification using Python-based web searches. Natural disaster events—defined as incidents causing more than ten deaths—are obtained from the Emergency Events Database (EM-DAT), the National Institute of Natural Hazards, the Global Disaster Data Platform, and the International Federation of Red Cross and Red Crescent Societies, and matched to CEOs’ early-life locations. Corporate ESG performance is measured using the Huazheng ESG Ratings constructed by Sino-Securities Index Information Service (Shanghai) Co., Ltd. Financial and governance data are drawn from the CSMAR database. After excluding financial firms, special treatment firms, and firms with missing data, our final sample consists of 1,111 unique CEOs and 4,968 firm-year observations from 2009 to 2023.
DOI: 10.5061/dryad.8w9ghx3r7
title: Underwater light attenuation inhibits native submerged plants and facilitates the invasive co-occurring plant Cabomba caroliniana

description: Decreasing in the diversity and distribution of native submerged plants
 have been widely observed in recent decades. Global underwater darkening,
 which is mainly caused by radiation dimming and a decrease in transparency
 due to e.g. eutrophication, has emerged as a general trend that strongly
 hampers the growth of submerged plants in lakes by decreasing the light
 available for photosynthesis. However, few studies have attempted to
 compare the responses of native and invasive submerged plants to
 underwater darkening. In this study, we aimed to compare the effects of
 light attenuation on the growth and photosynthesis traits of native and
 invasive submerged plants.
description: Through field investigations
 and a mesocosm experiment, the responses of functional traits of two representative native (water thyme
 (Hydrilla verticillata), Eurasian watermilfoil (Myriophyllum spicatum) and
 one invasive (Carolina fanwort (Cabomba caroliniana))
 plant
 species to various
 environmental factors, notably to underwater light
 attenuation, were studied.
DOI: 10.17632/nryfm5474y
title: Data for "Dynamic Capabilities for AI-Enabled Exploration: Antecedents, Mechanisms, and Innovation Outcomes"

description: Study Overview:
The study examines how technological, organizational, and environmental (TOE) factors enable firms to develop AI-related dynamic capabilities (Sensing Capability and AI-Enabled Exploration) and how these capabilities drive innovation performance. The research integrates the TOE framework with the Dynamic Capabilities View (DCV) and tests a serial mediation model with moderation.
Sample:
Survey data were collected from 245 senior and middle managers in Saudi Arabian firms across multiple industries, including Telecommunications & IT, Energy & Manufacturing, Banking & Finance, Public Sector, and Retail & Services.
Contents:

CSV Data File: Contains anonymized survey responses measuring seven constructs: Government Support (GS1-GS3), Organizational Readiness (OR1-OR3), Technology Compatibility (TC1-TC3), Competitive Pressure (CP1-CP3; note: CP1 was dropped during analysis due to low factor loading), Sensing Capability (SC1-SC3), AI-Enabled Exploration (AIE1-AIE4), and Innovation Performance (IP1-IP4). All items were measured on a 7-point Likert scale. Firm size and industry sector are also included.
R Script: Complete PLS-SEM analysis code using the seminr package, including measurement model validation, structural model assessment, serial mediation analysis, and moderation analysis with 5,000 bootstrap subsamples.

Ethical Considerations:
All data have been anonymized. Respondents provided informed consent.
DOI: 10.17632/nryfm5474y.1
title: Data for "Dynamic Capabilities for AI-Enabled Exploration: Antecedents, Mechanisms, and Innovation Outcomes"

description: Study Overview:
The study examines how technological, organizational, and environmental (TOE) factors enable firms to develop AI-related dynamic capabilities (Sensing Capability and AI-Enabled Exploration) and how these capabilities drive innovation performance. The research integrates the TOE framework with the Dynamic Capabilities View (DCV) and tests a serial mediation model with moderation.
Sample:
Survey data were collected from 245 senior and middle managers in Saudi Arabian firms across multiple industries, including Telecommunications & IT, Energy & Manufacturing, Banking & Finance, Public Sector, and Retail & Services.
Contents:

CSV Data File: Contains anonymized survey responses measuring seven constructs: Government Support (GS1-GS3), Organizational Readiness (OR1-OR3), Technology Compatibility (TC1-TC3), Competitive Pressure (CP1-CP3; note: CP1 was dropped during analysis due to low factor loading), Sensing Capability (SC1-SC3), AI-Enabled Exploration (AIE1-AIE4), and Innovation Performance (IP1-IP4). All items were measured on a 7-point Likert scale. Firm size and industry sector are also included.
R Script: Complete PLS-SEM analysis code using the seminr package, including measurement model validation, structural model assessment, serial mediation analysis, and moderation analysis with 5,000 bootstrap subsamples.

Ethical Considerations:
All data have been anonymized. Respondents provided informed consent.
DOI: 10.17632/v4dkr54j52
title: Root-zone drying regulates the hydrothermal environment of citrus, synergistically enhancing fruit quality and water use efficiency

description: The dataset encompasses key soil physicochemical properties and leaf physiological parameters collected from a controlled greenhouse drip irrigation experiment on 'Ehime 28' citrus trees conducted in 2021–2022. Soil measurements include accumulated soil temperature (SAT, °C·d), available phosphorus (SAP, mg·kg⁻¹), available potassium (SAK, mg·kg⁻¹), acid phosphatase activity (ACP, mg·g⁻¹·d⁻¹), sucrase activity (SC, mg·g⁻¹·d⁻¹), and urease activity (UE, mg·g⁻¹·d⁻¹) across different deficit irrigation treatments during fruit enlargement (Stage III) and color-turning/sugar accumulation (Stage IV) periods. Leaf physiological data comprise activities of superoxide dismutase (SOD, U·g⁻¹), peroxidase (POD, U·g⁻¹), catalase (CAT, U·g⁻¹), and leaf potassium content (LK, %). These parameters were analyzed to evaluate the regulatory effects of regulated deficit irrigation on root-zone hydrothermal conditions, nutrient availability, enzymatic activities, and antioxidant responses, providing insights into soil-plant interactions under water stress.
DOI: 10.17632/v4dkr54j52.1
title: Root-zone drying regulates the hydrothermal environment of citrus, synergistically enhancing fruit quality and water use efficiency

description: The dataset encompasses key soil physicochemical properties and leaf physiological parameters collected from a controlled greenhouse drip irrigation experiment on 'Ehime 28' citrus trees conducted in 2021–2022. Soil measurements include accumulated soil temperature (SAT, °C·d), available phosphorus (SAP, mg·kg⁻¹), available potassium (SAK, mg·kg⁻¹), acid phosphatase activity (ACP, mg·g⁻¹·d⁻¹), sucrase activity (SC, mg·g⁻¹·d⁻¹), and urease activity (UE, mg·g⁻¹·d⁻¹) across different deficit irrigation treatments during fruit enlargement (Stage III) and color-turning/sugar accumulation (Stage IV) periods. Leaf physiological data comprise activities of superoxide dismutase (SOD, U·g⁻¹), peroxidase (POD, U·g⁻¹), catalase (CAT, U·g⁻¹), and leaf potassium content (LK, %). These parameters were analyzed to evaluate the regulatory effects of regulated deficit irrigation on root-zone hydrothermal conditions, nutrient availability, enzymatic activities, and antioxidant responses, providing insights into soil-plant interactions under water stress.
DOI: 10.5061/dryad.fbg79cp00
title: Population genetics of Daphnimorpha species

description: A climate relict is of particular importance in evolutionary biology
 because of its long-term survival in the face of climatic
 oscillations. However, because their current distributions are usually
 restricted and fragmented, many climatic relicts have extinction
 risks. Daphnimorpha (Thymelaeaceae) is a Japanese endemic genus
 that comprises two species (D. capitellata and D. kudoi) showing a
 disjunct distribution in the southern part of Japan. These two
 species are endemic to a single mountain range. In this study,
 we conducted population genetic analyses using genome-wide single
 nucleotide polymorphism obtained from multiplexed inter-simple
 sequence repeat genotyping by sequencing to reveal the
 phylogeographic history and obtain conservation implications for
 the two species. The results showed these two species may have
 been isolated since the Tertiary period, indicating that they are climate
 relicts. In addition, D. kudoi showed clear genetic
 differentiation between two mountains (Mt. Nagata and Mt. Kuromi), with
 a decline in effective population sizes during the last glacial
 period. In contrast, D. capitellata showed no clear intraspecific
 genetic structure and its effective population size was relatively stable.
 These differences could be a result of differences in habitat
 preferences between the species. For conservation, we should
 manage the two species based on the three evolutionary significant units
 (ETUs; D. capitellata, D. kudoi population on Mt. Nagata, and D.
 kudoi population on Mt. Kuromi). Considering the limited gene
 flows among subpopulations and their small population sizes, all ETUs
 require conservative attention to maintain or increase their
 effective population sizes.
description: # Population genetics of Daphnimorpha species
 *
 3PopDiv_jointMAFpop1_0.obs ##input file for fastsimcoal2 *
 3PopDiv_jointMAFpop2_0.obs ##input file for fastsimcoal2 *
 3PopDiv_jointMAFpop2_1.obs ##input file for fastsimcoal2 *
 StairwayCapitellata.blueprint ##input file for stairway plo2 *
 StairwayKudoiKuromi.blueprint ##input file for stairway plo2 *
 StairwayKudoiNagata.blueprint ##input file for stairway plo2 c *
 apitellata_filteredADMIXTURE.vcf ##input file for ADMIXTURE * analysis
 kudoi_filteredADMIXTURE.vcf ##input file for ADMIXTURE * analysis
 populationsDaphnimorpha2sp.phylip ##input file for phylogenetic analysis