cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.2657339
title: Nanolaminography dataset: Three-dimensional imaging of integrated circuits with a macro to nanoscale zoom

description: Here we present a ptychographic X-ray laminography (PyXL) dataset. It is a new approach for nano-imaging that combines a coherent diffractive imaging technique called ptychography with laminography, which is a generalization of tomography. This allows achieving sub-20 nm resolution over large sample volumes. Non-destructive three-dimensional imaging over large volumes with nano-scale resolution is a challenge faced in many fields, perhaps most acutely in mapping the natural neural connectome and artificial silicon-based integrated circuits. For the latter, such inspection is of interest for quality control and security acquiring particular importance due to the delocalized nature of the chain connecting chip design, manufacture and use. A hierarchy of probes are used to image at length scales from that of the entire chip (millimeters) to those of individual features (nanometers) of the underlying transistors, starting with optical microscopy and finishing with transmission electron microscopy on thin slices prepared using a focused ion beam. What has been missing until now is a single technique yielding a three-dimensional image of the entire chip volume with zooming capability to produce high-resolution images of arbitrarily chosen sub-regions, including virtual delayering. The related publication can be accessed via ShareIt https://rdcu.be/bTudW
description: {"references": ["Holler, M., Odstrcil, M., Guizar-Sicairos, M., Lebugle, M., M\u00fcller, E., Finizio, S., Tinti, G., David, C., Zusman, J., Unglaub, W. and Bunk, O., 2019. Three-dimensional imaging of integrated circuits with macro-to nanoscale zoom. Nature Electronics, 2(10), pp.464-470."]}
DOI: 10.5281/zenodo.2657340
title: Nanolaminography dataset: Three-dimensional imaging of integrated circuits with a macro to nanoscale zoom

description: Here we present a ptychographic X-ray laminography (PyXL) dataset. It is a new approach for nano-imaging that combines a coherent diffractive imaging technique called ptychography with laminography, which is a generalization of tomography. This allows achieving sub-20 nm resolution over large sample volumes. Non-destructive three-dimensional imaging over large volumes with nano-scale resolution is a challenge faced in many fields, perhaps most acutely in mapping the natural neural connectome and artificial silicon-based integrated circuits. For the latter, such inspection is of interest for quality control and security acquiring particular importance due to the delocalized nature of the chain connecting chip design, manufacture and use. A hierarchy of probes are used to image at length scales from that of the entire chip (millimeters) to those of individual features (nanometers) of the underlying transistors, starting with optical microscopy and finishing with transmission electron microscopy on thin slices prepared using a focused ion beam. What has been missing until now is a single technique yielding a three-dimensional image of the entire chip volume with zooming capability to produce high-resolution images of arbitrarily chosen sub-regions, including virtual delayering. The related publication can be accessed via ShareIt https://rdcu.be/bTudW
description: {"references": ["Holler, M., Odstrcil, M., Guizar-Sicairos, M., Lebugle, M., M\u00fcller, E., Finizio, S., Tinti, G., David, C., Zusman, J., Unglaub, W. and Bunk, O., 2019. Three-dimensional imaging of integrated circuits with macro-to nanoscale zoom. Nature Electronics, 2(10), pp.464-470."]}
DOI: 10.5281/zenodo.3371328
title: Leaf responses to mild drought stress in natural variants of Arabidopsis.

description: Plant growth and crop yield are negatively affected by a reduction in water availability. However, a clear understanding of how growth is regulated under non-lethal drought conditions is lacking. Recent advances in genomics, phenomics and transcriptomics allow in-depth analysis of natural variation. In this study, we conducted a detailed screening of leaf growth responses to mild drought in six <em>Arabidopsis thaliana</em> accessions. The raw phenotyping can be found in:<br> - cellularData.txt -&gt; mature (22 days after stratification; DAS) leaf epidermis (third leaf) analysed for cell area, cell number, pavement cell area, pavement cell number, stomatal index and leaf area of the analysed leaf. - leaf3_maturity.txt -&gt; area of the third leaf at maturity (22DAs) in mm<sup>2.</sup> - leaf3_transition.txt -&gt; area of the third leaf at transition (last day of cell proliferation; 11 DAS) in mm<sup>2</sup>. - rosetteArea.txt -&gt; projected rosette area (mm<sup>2</sup>) over time (from 9-21DAS). The phenotyping results have been normalised for batch effects ('experiment' in raw data) and are found in cellularData_normalised.txt, leaf3_normalised.txt and rosetteArea_normalised.txt. Conversion from accession names (indiated as genotype in the data files) to the ID number used in the 1001genomes project (www.1001genomes.org) can be found in accessionIDs.txt. In each file 'C' indicates well-watered plants, while 'S' stand for mild-drought treatment. These results and methodological results are described in Clauw et al. (2015, Plant Physiology).
DOI: 10.5281/zenodo.3371329
title: Leaf responses to mild drought stress in natural variants of Arabidopsis.

description: Plant growth and crop yield are negatively affected by a reduction in water availability. However, a clear understanding of how growth is regulated under non-lethal drought conditions is lacking. Recent advances in genomics, phenomics and transcriptomics allow in-depth analysis of natural variation. In this study, we conducted a detailed screening of leaf growth responses to mild drought in six <em>Arabidopsis thaliana</em> accessions. The raw phenotyping can be found in:<br> - cellularData.txt -&gt; mature (22 days after stratification; DAS) leaf epidermis (third leaf) analysed for cell area, cell number, pavement cell area, pavement cell number, stomatal index and leaf area of the analysed leaf. - leaf3_maturity.txt -&gt; area of the third leaf at maturity (22DAs) in mm<sup>2.</sup> - leaf3_transition.txt -&gt; area of the third leaf at transition (last day of cell proliferation; 11 DAS) in mm<sup>2</sup>. - rosetteArea.txt -&gt; projected rosette area (mm<sup>2</sup>) over time (from 9-21DAS). The phenotyping results have been normalised for batch effects ('experiment' in raw data) and are found in cellularData_normalised.txt, leaf3_normalised.txt and rosetteArea_normalised.txt. Conversion from accession names (indiated as genotype in the data files) to the ID number used in the 1001genomes project (www.1001genomes.org) can be found in accessionIDs.txt. In each file 'C' indicates well-watered plants, while 'S' stand for mild-drought treatment. These results and methodological results are described in Clauw et al. (2015, Plant Physiology).
DOI: 10.7910/dvn/6cowhj/1ituus
title: MDA8_03.05x0625_NA.2005.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/2o7h6m
title: NO2.05x0625_NA.2015.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/afdxai
title: PM25_NO2_O3.PROFILE.05x0625_NA.2003.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/bux1wg
title: PM25.05x0625_NA.2001.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/ccg5zb
title: MDA8_03.05x0625_NA.2010.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/fh0vt6
title: MDA8_03.05x0625_NA.2001.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/y2rekt
title: NO2.05x0625_NA.2017.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/z26coh
title: MDA8_03.05x0625_NA.2008.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/h1co3t
title: PM25.05x0625_NA.2014.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/ic1c3r
title: MDA8_03.05x0625_NA.2004.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/owkyfz
title: MDA8_03.05x0625_NA.2011.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/vx8jvk
title: PM25_NO2_O3.PROFILE.05x0625_NA.2014.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/wqviha
title: AOD.05x0625_NA.2016.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/xs1gl4
title: PM25.05x0625_NA.2010.nc

description: :unav
DOI: 10.5281/zenodo.3371164
title: BPNet manuscript data 1

description: This repository holds the trained BPNet models and all the output files produced using the models including TF-MoDISco files, motif instances.
DOI: 10.7910/dvn/6cowhj/g7wfwp
title: PM25.05x0625_NA.2003.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/k0v7ax
title: AOD.05x0625_NA.2013.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/mknouu
title: NO2.05x0625_NA.2012.nc

description: :unav
DOI: 10.7910/dvn/6cowhj/qj4yka
title: NO2.05x0625_NA.2009.nc

description: :unav
DOI: 10.7910/dvn/hj10xp/skllqh
title: bhreno-vieira-ad-ufpe-2019.pdf

description: Manuscrito
DOI: 10.17632/h47zvjm3d2.1
title: Data for: Influence of h-BN as an additive on oxidation behaviour and kinetic characteristics of carbon/carbon composites

description: The file shows the original data of isothermal oxidation tests.
DOI: 10.18112/openneuro.ds002125.v1.0.0
title: Mouse_opto_3xTG
DOI: 10.15468/kof7rk
title: Craniofacial ontogeny in Tyrannosauridae (Dinosauria, Coelurosauria)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Carr, TD (1999): Craniofacial ontogeny in Tyrannosauridae (Dinosauria, Coelurosauria). Journal of Vertebrate Paleontology 19: 497-520, DOI: 10.5281/zenodo.3371479
DOI: 10.17632/3h3b6zjgfx.1
title: Data for: Pottery on the Periphery: Contact-Period Ceramics and Regional Integration at La Laguna, Tlaxcala, Mexico

description: This sheet includes the contact-period ceramics from La Laguna, Tlaxcala, Mexico.
DOI: 10.5281/zenodo.3371215
title: BPNet manuscript data 2

description: Training data used in the BPNet manuscript.
DOI: 10.7910/dvn/eisftl/pinwdl
title: ReplicationFiles_MergersPriceEffects.tar

description: Set of Stata .do files and .dta files for replication
DOI: 10.17632/73hvfpzfmw.1
title: Data for: Fuel Retention Diagnostic Setup (FREDIS) for desorption of gases from beryllium and tritium containing samples

description: 3D CAT model of FREDIS (status 2018)
DOI: 10.17632/vnjvndfpc9.1
title: Data for: ECART analysis of the STARDUST dust resuspension tests with an obstacle presence

description: Summary of the experimental resupension data for all the STARDUST tests.
DOI: 10.5061/dryad.6ps168j/1
title: Dryad Item 10.5061/DRYAD.6PS168J/1

description: (:tba)
DOI: 10.18716/nmrshiftdb2/2281
title: NMR data for (3S,5R,10S)-7-oxo-12-methoxyabieta-8,11,13-triene-3,11,14-triol
DOI: 10.25919/5d5b897438627
title: Parkes observations for project P892 semester 2019APRS_05

description: SUPERBx looks at the highest Galactic latitudes in a search for pulsars and fast radio bursts (FRBs). We use optimised GPU codes and supercomputing to search for these, making discoveries in real time. Handling our data as it comes in is essential for the SKA Phase I era so this work applies directly to the high-data rates of next generation telescopes. Our pulsar discoveries are typically nearby scintillating sources, intermittent sources and those in interesting binary systems. Our FRB discoveries have discovery lags of ~1 second, rather than months/years and these feed rapid alerts to the world-wide follow-up community via a dedicated VOEvent format an Astronomer's Telegrams. The goal of this is to allow localisation of the discovered FRBs. This is key for identifying FRB host galaxies, so as to solve the mystery of their progenitors and to exploit their many uses as tools for precision cosmology measurements.
DOI: 10.5281/zenodo.3371881
title: SUSTAIN NRL LT

description: Summary of key input parameters and turbulence statistics.
DOI: 10.5281/zenodo.3371882
title: SUSTAIN NRL LT

description: Summary of key input parameters and turbulence statistics.
DOI: 10.25345/c5c95x
title: MassIVE MSV000084216 - A multiple protease strategy to optimise shotgun proteomics of medicinal cannabis mature buds.
title: Earlier this year we published a method article aimed at optimising protein extraction from medicinal cannabis mature buds for trypsin-based shotgun proteomics (Vincent, Rochfort, and Spangenberg 2019). We then developed a top-down proteomics method (Vincent et al. under revision). This is yet another follow-up study aiming at optimising the digestion of medicinal cannabis proteins for identification purpose by bottom-up and middle-down proteomics. Four proteases, namely a mixture of trypsin-LysC, GluC and chymotrypsin which target different amino acids (AAs) and therefore are orthogonal and cleave proteins more or less frequently, were tested both on their own and sequentially or pooled, followed by nLC-MS analyses of the peptide digests. Bovine serum albumin (BSA) was used as a control of digestion efficiency. With this multiple protease strategy, BSA was reproducibly sequenced at 97 percent, with peptides ranging from 0.7 to 6.4 kD containing 5-54 AA residues and bearing from 0 to 6 miscleavages. The proteome of mature apical buds from medicinal cannabis was explored more in depth with the identification 494 unique accessions corresponding to 229 unique proteins from C. sativa and close relatives, including 130 (57 percent) novel annotations when the list is compared to that of our previous BUP study. Almost half of the medicinal cannabis proteins were identified with 100 percent sequence coverage, with peptides composed of 7-91 AA residues and ranging from 0.6-10 kD, thus falling into the middle-down proteomics domain. Such method will pave the way to deeper proteome exploration of medicinal cannabis reproductive organs.
DOI: 10.17632/vwshmt7pjp.1
title: Data for: Inferring emplacement sequences for the Cerberus region channelized lavas, Mars: Implications for magma sources.

description: These data include the mapped extent of the channelized lava flows and regional fissure network in the Cerberus region, Mars. The locations of crater counts, and the associated crater populations are also included.
DOI: 10.5281/zenodo.3371725
title: cimr test data

description: data for cimr build-deploy tests
DOI: 10.26186/5d5b8b5a28e56
title: Bynoe Harbour Habitat Mapping Survey 2016: High resolution bathymetry grid

description: This resource contains multibeam bathymetry data for Bynoe Harbour collected by Geoscience Australia (GA), the Australian Institute of Marine Science (AIMS) and the Northern Territory Government (Department of Environment and Natural Resources) during the period between 3 and 27 May 2016 on the RV Solander (survey SOL6187/GA0351). This project was made possible through offset funds provided by INPEX-led Ichthys LNG Project to Northern Territory Government Department of Environment and Natural Resources, and co-investment from Geoscience Australia and Australian Institute of Marine Science. The intent of this four year (2014-2018) program is to improve knowledge of the marine environments in the Darwin and Bynoe Harbour regions by collating and collecting baseline data that enable the creation of thematic habitat maps that underpin marine resource management decisions. The specific objectives of the survey were to: 1. Obtain high resolution geophysical (bathymetry) data for Bynoe Harbour; 2. Characterise substrates (acoustic backscatter properties, grainsize, sediment chemistry) for Bynoe Harbour; and 3. Collect tidal data for the survey area. Data acquired during the survey included: multibeam sonar bathymetry and acoustic backscatter; physical samples of seabed sediments, underwater photography and video of grab sample locations and oceanographic information including tidal data and sound velocity profiles. This dataset comprises multibeam bathymetry data. A detailed account of the survey is provided in: Siwabessy, P.J.W., Smit, N., Atkinson, I., Dando, N., Harries, S., Howard, F.J.F., Li, J., Nicholas W.A., Picard, K., Radke, L.C., Tran, M., Williams, D. and Whiteway, T. 2016. Bynoe Harbour Marine Survey 2016: GA4452/SOL6432 – Post-survey report. Record 2017/04. Geoscience Australia, Canberra. http://dx.doi.org/10.11636/Record.2017.004.
DOI: 10.5281/zenodo.3371726
title: Use of Nanoclays as Alternatives of Polymers Toward Improving Performance of Asphalt Binders

description: Corresponding data set for Tran-SET Project No. 17BASU01. Abstract of the final report is stated below for reference: "The main goal of this study is to assess the feasibility of the use of nanoclay as an alternative to commonly used polymers such as styrene-butadiene-styrene (SBS), which are used to modify the performance grade (PG) of asphalt binders. Three types of nanoclay and two types of neat binders were selected for laboratory investigation. Different amounts (1, 2, and 3%) of nanoclays were used. A blending protocol has been developed to mix the nanoclay with the asphalt binder. Rotational Viscosity (RV), Dynamic Shear Rheometer (DSR), Optical Contact Analyzer (OCA) and Atomic Force Microscope (AFM) were conducted to evaluate the properties of modified asphalt binders. Significant increases of viscosity and complex shear modulus were observed for nanoclay-modified binders because of nanoclay’s nanoscale phenomena such as structural features, quantum effects, spatial confinement, high surface energy, and a large fraction of surface atoms. The maximum rutting resistance is expected for binders modified with the 1% Cloisite 11B. The OCA test results suggest that the modified asphalt binders possess higher surface free energy than the neat binder. Therefore, cohesive energy which is an indicator of moisture damage was increased for modified binders. From the AFM analysis, adhesion and deformation values decreased for modified asphalt binders. The minimum adhesion and deformation values were found for asphalt binder samples modified with the 1% Cloisite 10A."
description: Tran-SET Project No. 17BASU01
DOI: 10.26186/5d5b8b6f6019a
title: Bynoe Harbour Habitat Mapping Survey 2016: High resolution backscatter grid

description: This resource contains multibeam backscatter data for Bynoe Harbour collected by Geoscience Australia (GA), the Australian Institute of Marine Science (AIMS) and the Northern Territory Government (Department of Environment and Natural Resources) during the period between 3 and 27 May 2016 on the RV Solander (survey SOL6187/GA0351). This project was made possible through offset funds provided by INPEX-led Ichthys LNG Project to Northern Territory Government Department of Environment and Natural Resources, and co-investment from Geoscience Australia and Australian Institute of Marine Science. The intent of this four year (2014-2018) program is to improve knowledge of the marine environments in the Darwin and Bynoe Harbour regions by collating and collecting baseline data that enable the creation of thematic habitat maps that underpin marine resource management decisions. The specific objectives of the survey were to: 1. Obtain high resolution geophysical (bathymetry) data for Bynoe Harbour; 2. Characterise substrates (acoustic backscatter properties, grainsize, sediment chemistry) for Bynoe Harbour; and 3. Collect tidal data for the survey area. Data acquired during the survey included: multibeam sonar bathymetry and acoustic backscatter; physical samples of seabed sediments, underwater photography and video of grab sample locations and oceanographic information including tidal data and sound velocity profiles. This dataset comprises multibeam backscatter data. A detailed account of the survey is provided in: Siwabessy, P.J.W., Smit, N., Atkinson, I., Dando, N., Harries, S., Howard, F.J.F., Li, J., Nicholas W.A., Picard, K., Radke, L.C., Tran, M., Williams, D. and Whiteway, T. 2016. Bynoe Harbour Marine Survey 2016: GA4452/SOL6432 – Post-survey report. Record 2017/04. Geoscience Australia, Canberra. http://dx.doi.org/10.11636/Record.2017.004.
DOI: 10.15468/0jjtfd
title: A review of the genus Ancylosis Zeller, 1839 (Lepidoptera: Pyralidae: Phycitinae) from Ukraine

description: This dataset contains the digitized treatments in Plazi based on the original journal article Bidzilya, Oleksiy, Budashkin, Yuriy, Yepishin, Viktor (2019): A review of the genus Ancylosis Zeller, 1839 (Lepidoptera: Pyralidae: Phycitinae) from Ukraine. Zootaxa 4657 (3): 437-473, DOI: https://doi.org/10.11646/zootaxa.4657.3.2
DOI: 10.7910/dvn/k0ajd7/ux0uqh
title: Expanded_Climate_Reports_v4_1300-1500.tab

description: :unav
DOI: 10.15468/nzaeug
title: First record of Hamacantha (Porifera, Demospongiae, Merliida, Hamacanthidae) from Japan, with description of two new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ise, Yuji, Woo, Sau Pinn, Tan, Shau Hwai, Fujita, Toshihiko (2019): First record of Hamacantha (Porifera, Demospongiae, Merliida, Hamacanthidae) from Japan, with description of two new species. Zootaxa 4657 (3): 474-482, DOI: https://doi.org/10.11646/zootaxa.4657.3.3
DOI: 10.15468/fzscxc
title: The Ascidiacea collected during the 2017 British Columbia Hakai MarineGEO BioBlitz

description: This dataset contains the digitized treatments in Plazi based on the original journal article Lambert, Gretchen (2019): The Ascidiacea collected during the 2017 British Columbia Hakai MarineGEO BioBlitz. Zootaxa 4657 (3): 401-436, DOI: https://doi.org/10.11646/zootaxa.4657.3.1
DOI: 10.15468/hpbsvc
title: Taxonomy of Alpioniscus (Illyrionethes): A. magnus and three new species from the Dinaric Karst (Isopoda: Oniscidea: Trichoniscidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Bedek, Jana, Gottstein, Sanja, Taiti, Stefano (2019): Taxonomy of Alpioniscus (Illyrionethes): A. magnus and three new species from the Dinaric Karst (Isopoda: Oniscidea: Trichoniscidae). Zootaxa 4657 (3): 483-502, DOI: https://doi.org/10.11646/zootaxa.4657.3.4
DOI: 10.15468/h9rv10
title: The Rhyacophila fasciata Group in Greece: Rhyacophila kykladica Malicky & Sipahiler 1993 (stat. prom.) (Trichoptera: Rhyacophilidae). Morphological description, genetic and ecological features

description: This dataset contains the digitized treatments in Plazi based on the original journal article Valladolid, Maria, Karaouzas, Ioannis, Arauzo, Mercedes, Dorda, Beatriz A., Rey, Isabel (2019): The Rhyacophila fasciata Group in Greece: Rhyacophila kykladica Malicky & Sipahiler 1993 (stat. prom.) (Trichoptera: Rhyacophilidae). Morphological description, genetic and ecological features. Zootaxa 4657 (3): 503-522, DOI: https://doi.org/10.11646/zootaxa.4657.3.5
DOI: 10.15468/u1twb3
title: Three new species of Ochyrocera (Araneae, Ochyroceratidae) from Southeastern Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Castanheira, Pedro De Souza, Pérez-González, Abel, Prado, André Wanderley Do, Baptista, Renner Luiz Cerqueira (2019): Three new species of Ochyrocera (Araneae, Ochyroceratidae) from Southeastern Brazil. Zootaxa 4657 (3): 523-544, DOI: https://doi.org/10.11646/zootaxa.4657.3.6
DOI: 10.5284/1056098
title: Land off Newton Road, North Petherton, Somerset. Archaeological Evaluation (OASIS ID: cotswold2-322209)

description: In December 2017, Cotswold Archaeology carried out an archaeological evaluation of land off Newton Road, North Petherton, Somerset. A total of 18 trenches was excavated within the site. The evaluation identified a series of ditches, pits and postholes across the site. A possible prehistoric ring ditch was recorded in the south-eastern part of the site, and an area of intensive late prehistoric/Roman activity was recorded in the north-western part of the site. The evaluation also recorded a broad scattering of post-medieval/modern and undated ditches.
DOI: 10.15468/mba2rb
title: Luciogobius yubai, a new species of gobioid fish (Teleostei: Gobiidae) from Japan

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ikeda, Yuji, Tamada, Kazuaki, Hirashima, Kentarou (2019): Luciogobius yubai, a new species of gobioid fish (Teleostei: Gobiidae) from Japan. Zootaxa 4657 (3): 565-572, DOI: https://doi.org/10.11646/zootaxa.4657.3.8