cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11756637.v1
title: Fast immersion to test the stability of aggregates in water: consequences for interpreting results from tropical soil classes

description: ABSTRACT. Aggregates are the primary structural components of soil and have been used as an indicator of soil quality in conservation systems. The objective of this study was to analyse the effect of slow pre-wetting on the results of the aggregate stability test for different classes of tropical soils. Data were arranged in a 2 x 4 factorial design with three replications, in which the first factor comprised the two methods of pre-treatment on soil aggregates: without pre-wetting (WOPW), which considered the moisture of the aggregates in the field, and with pre-wetting (WPW), which considered the slow wetting of aggregates through capillarity on wet filter paper for 24h. The second factor consisted of four soil classes: Typic Dystrustept (Cambissolo Aplico distrófico in Embrapa), Typic Hapludult (Argissolo Amarelo distrófico), Rhodic Kandiudult (Nitossolo Vermelho distrófico), and Anionic Acrudox (Latossolo Vermelho distróferrico) and considered horizons A and B. The pre-wetting significantly increased the values of the weighted average diameter, geometric mean diameter and aggregate stability index. In soils with high organic carbon content, the practice of pre-moistening did not provide variation in aggregation.
DOI: 10.6084/m9.figshare.20012736.v1
title: Habitat complexity and mite population on Caryocar brasiliense trees

description: ABSTRACT. The objective was to study the habitat complexity of mite populations on Caryocar brasiliense trees under natural and cultivated field conditions. The study was performed in the municipality of Montes Claros, in the state of Minas Gerais, Brazil, over 3 years. Three types of areas were studied: 1) Cerrado, 2) pasture, and 3) a university Campus. Several chlorotic spots were detected on leaves with larger populations of Tetranychus sp. and Eutetranychus sp. (Tetranychidae). The greatest numbers of Agistemus sp. (Stigmaeidae) on leaves and Histiostoma sp. (Histiostomidae) and Proctolaelaps sp. (Ascidae) on fruits were observed in the pasture, and that of Histiostoma sp. on leaves in the pasture and on the university Campus. In general, the herbivorous mites (e.g., Tetranychus sp.) found on C. brasiliense plants were correlated with more clayey soils with a higher cationic exchange capacity; larger populations of mites (e.g., Agistemus sp. and Histiostoma sp.) were found on the C. brasiliense trees with the largest crown sizes; and associations between predator mites (e.g., Agistemus sp.) and phytophagous mites (e.g., Tetranychus sp.1) were observed. Greater habitat diversity and more complex plant architectures favored the mite populations. The positive effect of loamier soil on herbivorous mites indicates that these species are adapted to Cerrado conditions. Some recorded species of herbivorous mites can be pests in commercial plantations of C. brasiliense.
DOI: 10.6084/m9.figshare.20012736
title: Habitat complexity and mite population on Caryocar brasiliense trees

description: ABSTRACT. The objective was to study the habitat complexity of mite populations on Caryocar brasiliense trees under natural and cultivated field conditions. The study was performed in the municipality of Montes Claros, in the state of Minas Gerais, Brazil, over 3 years. Three types of areas were studied: 1) Cerrado, 2) pasture, and 3) a university Campus. Several chlorotic spots were detected on leaves with larger populations of Tetranychus sp. and Eutetranychus sp. (Tetranychidae). The greatest numbers of Agistemus sp. (Stigmaeidae) on leaves and Histiostoma sp. (Histiostomidae) and Proctolaelaps sp. (Ascidae) on fruits were observed in the pasture, and that of Histiostoma sp. on leaves in the pasture and on the university Campus. In general, the herbivorous mites (e.g., Tetranychus sp.) found on C. brasiliense plants were correlated with more clayey soils with a higher cationic exchange capacity; larger populations of mites (e.g., Agistemus sp. and Histiostoma sp.) were found on the C. brasiliense trees with the largest crown sizes; and associations between predator mites (e.g., Agistemus sp.) and phytophagous mites (e.g., Tetranychus sp.1) were observed. Greater habitat diversity and more complex plant architectures favored the mite populations. The positive effect of loamier soil on herbivorous mites indicates that these species are adapted to Cerrado conditions. Some recorded species of herbivorous mites can be pests in commercial plantations of C. brasiliense.
DOI: 10.6084/m9.figshare.20012737
title: Protocol for detecting Curtobacterium flaccumfaciens pv. flaccumfaciens in the leaves of infected bean plants (Phaseolus vulgaris L.)

description: ABSTRACT. Curtobacterium flaccumfaciens pv. flaccumfaciens (Cff), which is a gram-positive bacterium that causes wilting in several cultivated plants, is one of the main disease-causing bacteria in beans (Phaseolus vulgaris L.). Different techniques are employed to detect pathogens in bean plants; however, only a few slow and inefficient methodologies can be used to detect Cff. Hence, there is a need for rapid and efficient techniques to detect Cff for disease management. The objective of our study was to develop a technique to effectively detect Cff in the leaves of infected bean plants by optimizing a previously developed method. We modified the extraction method by reducing the amount of water used, replacing seeds with leaf tissues (obtained from the veins and petioles) and using CffFOR2 and CffREV4 primers specific for Cff. Our optimized method exploits a concentration gradient generated in the plant tissue through osmosis to disrupt the plant cell wall and efficiently isolate bacterial cells. DNA extracted from the isolated bacterial cells was amplified by polymerase chain reaction. This method allowed efficient detection of Cff in leaf tissues.
DOI: 10.6084/m9.figshare.20012737.v1
title: Protocol for detecting Curtobacterium flaccumfaciens pv. flaccumfaciens in the leaves of infected bean plants (Phaseolus vulgaris L.)

description: ABSTRACT. Curtobacterium flaccumfaciens pv. flaccumfaciens (Cff), which is a gram-positive bacterium that causes wilting in several cultivated plants, is one of the main disease-causing bacteria in beans (Phaseolus vulgaris L.). Different techniques are employed to detect pathogens in bean plants; however, only a few slow and inefficient methodologies can be used to detect Cff. Hence, there is a need for rapid and efficient techniques to detect Cff for disease management. The objective of our study was to develop a technique to effectively detect Cff in the leaves of infected bean plants by optimizing a previously developed method. We modified the extraction method by reducing the amount of water used, replacing seeds with leaf tissues (obtained from the veins and petioles) and using CffFOR2 and CffREV4 primers specific for Cff. Our optimized method exploits a concentration gradient generated in the plant tissue through osmosis to disrupt the plant cell wall and efficiently isolate bacterial cells. DNA extracted from the isolated bacterial cells was amplified by polymerase chain reaction. This method allowed efficient detection of Cff in leaf tissues.
DOI: 10.6084/m9.figshare.20012739
title: Using fuzzy logic to select coloured-fibre cotton genotypes based on adaptability and yield stability

description: ABSTRACT. Cotton (Gossypium hirsutum L.) is the world’s leading natural textile fibre and is grown in over 60 countries, including Brazil, where it is an important agricultural commodity. The cultivation area currently covers approximately one million hectares in Brazil and has expanded into every region of the country, especially the Cerrado biome. Because of this expansion, it is necessary to analyse the influence of the environment on the genotype behaviour to optimize yields. Thus, the objective of this study was to compare fuzzy logic to traditional methods for selecting coloured-fibre cotton genotypes with high adaptability and yield stability. The experiment was conducted on the 2013/2014, 2014/2015, 2015/2016, and 2016/2017 crops of the Capim Branco farm at the Federal University of Uberlândia, Uberlândia, Minas Gerais, Brazil. The following methods were used to select genotypes for adaptability and stability: the Lin and Binns model, additive main effects and multiplicative interaction (AMMI) analysis and the Sugeno fuzzy logic controller. An interaction of the genotype with the environment that affected yield was detected. Environment 4 (the 2016/2017 crop) showed to the lowest genotype to environment interaction. The fuzzy logic approach showed agreement with AMMI and the nonparametric Lin and Binns method. The linguistic fuzzy logic used in the Sugeno fuzzy logic controller demonstrated the potential for selecting cotton genotypes in plant breeding programmes. The UFUJP-16 and UFUPJ-17 genotypes were adaptable, stable and showed promising yields within the tested environments. The fuzzy logic method was effective for estimating adaptability and stability.
DOI: 10.6084/m9.figshare.20012739.v1
title: Using fuzzy logic to select coloured-fibre cotton genotypes based on adaptability and yield stability

description: ABSTRACT. Cotton (Gossypium hirsutum L.) is the world’s leading natural textile fibre and is grown in over 60 countries, including Brazil, where it is an important agricultural commodity. The cultivation area currently covers approximately one million hectares in Brazil and has expanded into every region of the country, especially the Cerrado biome. Because of this expansion, it is necessary to analyse the influence of the environment on the genotype behaviour to optimize yields. Thus, the objective of this study was to compare fuzzy logic to traditional methods for selecting coloured-fibre cotton genotypes with high adaptability and yield stability. The experiment was conducted on the 2013/2014, 2014/2015, 2015/2016, and 2016/2017 crops of the Capim Branco farm at the Federal University of Uberlândia, Uberlândia, Minas Gerais, Brazil. The following methods were used to select genotypes for adaptability and stability: the Lin and Binns model, additive main effects and multiplicative interaction (AMMI) analysis and the Sugeno fuzzy logic controller. An interaction of the genotype with the environment that affected yield was detected. Environment 4 (the 2016/2017 crop) showed to the lowest genotype to environment interaction. The fuzzy logic approach showed agreement with AMMI and the nonparametric Lin and Binns method. The linguistic fuzzy logic used in the Sugeno fuzzy logic controller demonstrated the potential for selecting cotton genotypes in plant breeding programmes. The UFUJP-16 and UFUPJ-17 genotypes were adaptable, stable and showed promising yields within the tested environments. The fuzzy logic method was effective for estimating adaptability and stability.
DOI: 10.6084/m9.figshare.20012742
title: Combining ability and genetic divergence among tropical maize inbred lines using SSR markers

description: ABSTRACT. Our objectives were to evaluate general and specific combining ability (SCA) and genetic divergence among tropical maize inbred lines using single sequence repeat (SSR) markers. Thirteen inbred lines were crossed based on a complete diallel scheme. Hybrids and three checks were evaluated in a lattice experimental design. Silk and anthesis flowering, average plant height, average ear height, white spot (Pantoea ananatis) and gray leaf spot (Cercospora zeae-maydis) severity, and grain yield were evaluated. Significant differences (p &lt; 0.05) for general and specific combining abilities were observed for all traits. Based on additive effects, inbred lines 1 (Flash) and 12 (SG 6015) were selected to reduce the flowering period and plant and ear height. Inbred lines 2 (CD 303) and 3 (AG 8080) were selected to reduce disease severity. For the simultaneous increase in grain yield and reduced severity of diseases, line 11 (AG 9090) as a parent or tester in topcross schemes is recommended. According to non-additive effects, crosses 2 (CD 303) × 13 (DKB 747) and 11 (AG 9090) × 12 (SG 6015) were selected for grain yield and future breeding programs. Six groups were identified using SSR markers; a major group contained six inbred lines. Because of the minor relationship between genetic divergence and SCA effects on grain yield limits, the use of the groups for future divergent crosses is recommended.
DOI: 10.6084/m9.figshare.20012742.v1
title: Combining ability and genetic divergence among tropical maize inbred lines using SSR markers

description: ABSTRACT. Our objectives were to evaluate general and specific combining ability (SCA) and genetic divergence among tropical maize inbred lines using single sequence repeat (SSR) markers. Thirteen inbred lines were crossed based on a complete diallel scheme. Hybrids and three checks were evaluated in a lattice experimental design. Silk and anthesis flowering, average plant height, average ear height, white spot (Pantoea ananatis) and gray leaf spot (Cercospora zeae-maydis) severity, and grain yield were evaluated. Significant differences (p &lt; 0.05) for general and specific combining abilities were observed for all traits. Based on additive effects, inbred lines 1 (Flash) and 12 (SG 6015) were selected to reduce the flowering period and plant and ear height. Inbred lines 2 (CD 303) and 3 (AG 8080) were selected to reduce disease severity. For the simultaneous increase in grain yield and reduced severity of diseases, line 11 (AG 9090) as a parent or tester in topcross schemes is recommended. According to non-additive effects, crosses 2 (CD 303) × 13 (DKB 747) and 11 (AG 9090) × 12 (SG 6015) were selected for grain yield and future breeding programs. Six groups were identified using SSR markers; a major group contained six inbred lines. Because of the minor relationship between genetic divergence and SCA effects on grain yield limits, the use of the groups for future divergent crosses is recommended.
DOI: 10.6084/m9.figshare.20012743
title: Selection of S3 progenies of forage maize based on topcrosses with different testers

description: ABSTRACT. Maize forage is commonly used as silage in milk and beef cattle livestock production systems. Despite the wide variety of maize hybrids with high potential for grain production, few available hybrids have been developed exclusively for forage aptitude. The present study aimed to select S3 maize progenies derived from the single hybrid AS1572 based on the combining ability of forage traits in topcrosses with testers AG8025, 70.H26.1, and MLP102. The 135 resulting topcross hybrids were assessed in partial diallel in Guarapuava and Rio Bonito do Iguaçu, Paraná State, Brazil. Were evaluated the contents of neutral detergent fiber (NDF, %DM) and acid detergent fiber (ADF, %DM), forage dry matter yield (DMY, t ha-1), and in situ digestibility of forage dry matter (DIG, %DM). For all evaluated traits, the variability allowed us to select superior progenies. Progenies 3.1, 22.1, and 39.1stood out in terms of NDF, ADF, and DIG, whereas progenies 47.1, 73.1, 79.1, and 90.2 were efficient in increasing the forage dry matter yield. The testers AG8025 and 70.H26.1, of narrow genetic base, are the best to explore genetic variability among progenies.
DOI: 10.6084/m9.figshare.20012743.v1
title: Selection of S3 progenies of forage maize based on topcrosses with different testers

description: ABSTRACT. Maize forage is commonly used as silage in milk and beef cattle livestock production systems. Despite the wide variety of maize hybrids with high potential for grain production, few available hybrids have been developed exclusively for forage aptitude. The present study aimed to select S3 maize progenies derived from the single hybrid AS1572 based on the combining ability of forage traits in topcrosses with testers AG8025, 70.H26.1, and MLP102. The 135 resulting topcross hybrids were assessed in partial diallel in Guarapuava and Rio Bonito do Iguaçu, Paraná State, Brazil. Were evaluated the contents of neutral detergent fiber (NDF, %DM) and acid detergent fiber (ADF, %DM), forage dry matter yield (DMY, t ha-1), and in situ digestibility of forage dry matter (DIG, %DM). For all evaluated traits, the variability allowed us to select superior progenies. Progenies 3.1, 22.1, and 39.1stood out in terms of NDF, ADF, and DIG, whereas progenies 47.1, 73.1, 79.1, and 90.2 were efficient in increasing the forage dry matter yield. The testers AG8025 and 70.H26.1, of narrow genetic base, are the best to explore genetic variability among progenies.
DOI: 10.6084/m9.figshare.20012745
title: Adaptation of the rapid multiplication method: selecting stem cuttings based on their number of leaves for cassava seedling production

description: ABSTRACT. A study was conducted during four growing seasons to investigate the rooting capacity and survival percentage of cassava seedlings from stem cuttings selected based on their number of leaves. The experimental design was a randomized block design with five replications in a factorial scheme (4 × 2 × 2), totalling 16 treatments. Treatments consisted of combinations of growing season (September 22, October 7 and 19, and November 25), stem cuttings smaller (15 to 19.99 mm) and larger (20 to 25 mm) than 20 mm in diameter, and number of leaves on the stem cuttings (3 to 5 and 6 to 8 leaves). The experiment was carried out during the four growing seasons in a Van der Hoeven greenhouse. The greenhouse, as well as the benches on which the treatments were placed, had a north-south orientation. The greenhouse has an automatic mist irrigation system, and the mean temperature was 25 °C. The plant height at planting, number of leaves at planting, and number of leaves at 7 days after planting were measured. The final number of leaves, final plant height, shoot dry matter, root dry matter, and total dry matter were measured after acclimatization. Stem cuttings between 20 and 25 mm in diameter should be used to produce cassava seedlings with the rapid multiplication method. Cuttings with 6 to 8 visible leaves should be collected, and the cuttings should be planted at the end of September.
DOI: 10.6084/m9.figshare.20012745.v1
title: Adaptation of the rapid multiplication method: selecting stem cuttings based on their number of leaves for cassava seedling production

description: ABSTRACT. A study was conducted during four growing seasons to investigate the rooting capacity and survival percentage of cassava seedlings from stem cuttings selected based on their number of leaves. The experimental design was a randomized block design with five replications in a factorial scheme (4 × 2 × 2), totalling 16 treatments. Treatments consisted of combinations of growing season (September 22, October 7 and 19, and November 25), stem cuttings smaller (15 to 19.99 mm) and larger (20 to 25 mm) than 20 mm in diameter, and number of leaves on the stem cuttings (3 to 5 and 6 to 8 leaves). The experiment was carried out during the four growing seasons in a Van der Hoeven greenhouse. The greenhouse, as well as the benches on which the treatments were placed, had a north-south orientation. The greenhouse has an automatic mist irrigation system, and the mean temperature was 25 °C. The plant height at planting, number of leaves at planting, and number of leaves at 7 days after planting were measured. The final number of leaves, final plant height, shoot dry matter, root dry matter, and total dry matter were measured after acclimatization. Stem cuttings between 20 and 25 mm in diameter should be used to produce cassava seedlings with the rapid multiplication method. Cuttings with 6 to 8 visible leaves should be collected, and the cuttings should be planted at the end of September.
DOI: 10.6084/m9.figshare.20012746
title: Mathematical modeling and effect of thin-layer drying and lyophilization on antioxidant compounds from ultrasonic-assisted extracted Muntingia calabura peels

description: ABSTRACT. Muntingia calabura fruits are rich in bioactive compounds such as antioxidants, and the consumption of these compounds is associated with cancer prevention and aging. In this study, mathematical models were used to fit the experimental data of the Muntingia calabura peel drying kinetics, and the effective diffusion coefficient, activation energy and thermodynamic properties of the process were determined. Then, the effect of the drying temperature on the antioxidant activity and phenolic compounds of fruit peels was examined using conventional extraction and ultrasonication. Among the analyzed models, the logarithmic model was selected to represent the drying phenomenon of the calabura peel kinetics. The effective diffusion coefficient decreased by 74% as the temperature increased from 40 to 60°C, and the activation energy for liquid diffusion during drying was 23.96 kJ mol-1. The enthalpy and entropy decreased with increasing temperature, while the Gibbs free energy increased by 5% for each 10°C increase in temperature. Regarding the content of phenolic compounds and the antioxidant activity of the calabura peel, it was observed that an increase in the drying temperature had a positive effect on the conservation of the bioactive compounds, making it possible to conclude that drying at 60°C and ultrasound extraction are the most suitable approach to conduct the process.
DOI: 10.6084/m9.figshare.20012746.v1
title: Mathematical modeling and effect of thin-layer drying and lyophilization on antioxidant compounds from ultrasonic-assisted extracted Muntingia calabura peels

description: ABSTRACT. Muntingia calabura fruits are rich in bioactive compounds such as antioxidants, and the consumption of these compounds is associated with cancer prevention and aging. In this study, mathematical models were used to fit the experimental data of the Muntingia calabura peel drying kinetics, and the effective diffusion coefficient, activation energy and thermodynamic properties of the process were determined. Then, the effect of the drying temperature on the antioxidant activity and phenolic compounds of fruit peels was examined using conventional extraction and ultrasonication. Among the analyzed models, the logarithmic model was selected to represent the drying phenomenon of the calabura peel kinetics. The effective diffusion coefficient decreased by 74% as the temperature increased from 40 to 60°C, and the activation energy for liquid diffusion during drying was 23.96 kJ mol-1. The enthalpy and entropy decreased with increasing temperature, while the Gibbs free energy increased by 5% for each 10°C increase in temperature. Regarding the content of phenolic compounds and the antioxidant activity of the calabura peel, it was observed that an increase in the drying temperature had a positive effect on the conservation of the bioactive compounds, making it possible to conclude that drying at 60°C and ultrasound extraction are the most suitable approach to conduct the process.