cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/4897e55f09bba7368ccdf5a495d5514b
title: Percent carbon and nitrogen in leaf tissue:Specialization, maintenance of diversity and ecosystem consequences of growth defense trade-offs in a model system, the hyper-diverse willow communities of Cedar Creek

description: Cedar Creek includes a diversity of habitats, which support an astonishing number of species (15) from a single evolutionary lineage: the willow family (Salicaceae). The physiological tolerances and abiotic mechanisms that maintain natural diversity in this hyper-diverse system are beginning to be understood; the role of biotic interactions, however, remains a major gap in understanding. We hypothesize that insect herbivory plays a critical role in niche partitioning, providing an important explanation for high willow diversity. Using a replicated series of common gardens and insect herbivore manipulations in resource rich and resource poor habitats, we are testing for evolved trade-offs between defense investment and growth rate. We expect specialized plant syndromes to emerge along the continuum from ???herbivore escape??? via fast growth in high resource environments to ???anti-herbivore protection??? via heavy investment in defense in low resource environments. Evolved growth/defense strategies that promote diversity are also likely to have ecosystem consequences due to foliar chemical influences on decomposition and the composition and diversity of the insect communities they support. The proposed research takes advantage of natural diversity, providing an important model system at Cedar Creek.
DOI: 10.5281/zenodo.4068484
title: Basic Considerations for the Observability of Kinematically Offset Binary AGN

description: KDE resampled massive black-hole (MBH) binary population used for the analysis in Kelley 2020, <em>Considerations for the Observability of Kinematically Offset Binary AGN</em> (2005.10255). We start with a population of MBH binaries derived from the Illustris cosmological simulations, and evolved using semi-analytic post-processing models. These methods are described in Kelley et al. 2016 (1606.01900) and Kelley et al. 2017a,b (1702.02180 and 1711.00075). We then use the kernel density estimation (KDE) technique to resample this population from the Illustris volume, into a sample of binaries from a full, simulated light-cone of observations. The binaries are resampled in bins of observed orbital period. The number of resampled binaries in a given period bin are restricted to 500,000. When this occurs, the 'weight' of those binaries is assigned a value greater than one, while the 'weight' of binaries in unrestricted period bins is set to unity. For example, if the 'true' number of binaries in a bin should have been 1e6, the number of samples would be restricted to 5e5, and the weight of each of those binaries would be set to 2.0. If the number of binaries in a bin were instead 2e5, which is less than the limit, then each of those binaries is given a weight of 1.0. Only a single realization of this sample is included, but additional realizations can be produced if needed and on request. The data are presented in hdf5 format and contain the following arrays: <pre><code># Meta-Data `periods`: shape: (201,) units: seconds descr: the edges of the bins in observed orbital period from which the population was sampled. `counts`: shape: (200,) units: None descr: The number of binaries produced in each period bin. This number for each bin is capped at 500,000. The sum of these values equals the total number of samples (70622013). # Data In this particular realization of data, the number of sampled binaries is `S = 70622013`. `mtot`: shape: (S,) units: grams descr: the total mass of each binary (`M = M1 + M2`). `mrat`: shape: (S,) units: None descr: The mass ratio of each binary, `q = M2/M1 &lt;= 1.0`, where M2 is the mass of the secondary (lower mass) component. `pobs`: shape: (S,) units: seconds descr: The orbital period of each binary in the observer's rest frame (at redshift, `z = 0`). `redz`: shape: (S,) units: None descr: The redshift of each binary. `weights`: shape: (S,) units: None descr: The number of 'true' binaries (i.e. the number that are expected to occur in this realization of an observed universe) represented by this individual 'sample', and having similar binary parameters.</code></pre>
description: The KDE resampling was performed using the `kalepy` python package, available on github at https://github.com/lzkelley/kalepy, and installable with `pip install kalepy`.
DOI: 10.25387/g3.13048073
title: Supplemental Material for Schmidt, Cuny, and Rudolf, 2020

description: Supplementary figures and tables as described in manuscript "Preventing photomorbidity in long-term multi-color fluorescence imaging of S. cerevisiae and S. pombe". File S1 contains guidelines to prevent photomorbidity in live-cell imaging in practice. File S2 contains a time-lapse movie of a growing \textit{S. cerevisiae} colony inside the microfluidic chip.
DOI: 10.25387/g3.13048073.v1
title: Supplemental Material for Schmidt, Cuny, and Rudolf, 2020

description: Supplementary figures and tables as described in manuscript "Preventing photomorbidity in long-term multi-color fluorescence imaging of S. cerevisiae and S. pombe". File S1 contains guidelines to prevent photomorbidity in live-cell imaging in practice. File S2 contains a time-lapse movie of a growing \textit{S. cerevisiae} colony inside the microfluidic chip.
DOI: 10.6084/m9.figshare.13055342
title: Global Records of the Red Swamp Crayfish - Procambarus clarkii

description: This dataset compiles a total of 6924 global records of the red swamp crayfish (Procambarus clarkii) until 2019. For each record, we detailed native and non-native ranges, country, location (if known), latitude, longitude and year.
DOI: 10.5281/zenodo.4068554
title: Impact of coronavirus disease 2019 (COVID-19) outbreak on radiology research: an Italian survey

description: This article reports the results of a national survey, which had the purpose of understanding how COVID-19 pandemic has changed the scientific activity of Italian radiology researchers. A total of 327 Italian radiologists took part in the survey (mean age: 49±12 years). The majority of participants (245/327, 74.9%) was not working for or in agreement with a University and most of them were hospital staff radiologists (222/327, 67.9%). More than two-thirds of surveyed radiologists (231/327, 71%) was working in a public institution, which mostly was a general hospital (188/327, 57.5%); 86/327 (26.3%) participants declared to work in a university hospital. After national lockdown, the working-flow came back to normal in the vast majority of cases (285/327, 87.2%). Participants reported that a total of 462 radiological trials were recruiting patients at their institutions prior to COVID-19 outbreak, of which 332 (71.9%) were stopped during the emergency. On the other hand, 252 radiological trials have been started during the pandemic, of which 156 were non-COVID-19 trials (61.9%) and 96 were focused on COVID-19 patients (38.2%). Participants reported a significant increase of the number of hours per week spent for research purposes during national lockdown (mean 4.5±8.9 hours during lockdown vs. 3.3±6.8 hours before lockdown; p=.046), followed by a significant drop after lockdown (3.2±6.5 hours per week, p=.035). Notably, 60% of participants reported that they do not spend any time on research. During national lockdown, 15.6% of participants started new review articles and completed old papers, 14.1% completed old works, and 8.9% started new review articles. Ninety-six surveyed radiologists (29.3%) declared to have submitted at least one article during COVID-19 emergency. This study confirms the need to be prepared to future challenging scenarios like COVID-19 emergency in order to support radiology researchers, thereby allowing them to push forward their activity.
DOI: 10.5281/zenodo.4068553
title: Impact of coronavirus disease 2019 (COVID-19) outbreak on radiology research: an Italian survey

description: This article reports the results of a national survey, which had the purpose of understanding how COVID-19 pandemic has changed the scientific activity of Italian radiology researchers. A total of 327 Italian radiologists took part in the survey (mean age: 49±12 years). The majority of participants (245/327, 74.9%) was not working for or in agreement with a University and most of them were hospital staff radiologists (222/327, 67.9%). More than two-thirds of surveyed radiologists (231/327, 71%) was working in a public institution, which mostly was a general hospital (188/327, 57.5%); 86/327 (26.3%) participants declared to work in a university hospital. After national lockdown, the working-flow came back to normal in the vast majority of cases (285/327, 87.2%). Participants reported that a total of 462 radiological trials were recruiting patients at their institutions prior to COVID-19 outbreak, of which 332 (71.9%) were stopped during the emergency. On the other hand, 252 radiological trials have been started during the pandemic, of which 156 were non-COVID-19 trials (61.9%) and 96 were focused on COVID-19 patients (38.2%). Participants reported a significant increase of the number of hours per week spent for research purposes during national lockdown (mean 4.5±8.9 hours during lockdown vs. 3.3±6.8 hours before lockdown; p=.046), followed by a significant drop after lockdown (3.2±6.5 hours per week, p=.035). Notably, 60% of participants reported that they do not spend any time on research. During national lockdown, 15.6% of participants started new review articles and completed old papers, 14.1% completed old works, and 8.9% started new review articles. Ninety-six surveyed radiologists (29.3%) declared to have submitted at least one article during COVID-19 emergency. This study confirms the need to be prepared to future challenging scenarios like COVID-19 emergency in order to support radiology researchers, thereby allowing them to push forward their activity.
DOI: 10.6084/m9.figshare.13035002
title: In-vitro evaluation of the anti-diabetic potential of Helichrysum petiolare Hilliard & B.L. Burtt using HepG2 (C3A) and L6 cell lines

description: <b>Background: </b><i>Helichrysum petiolare</i> Hilliard & B.L. Burtt has been listed in a survey of plants used in traditional medicine for the treatment of type 2 diabetes in the Eastern Cape of South Africa. In this study, the antidiabetic potentials of ethanol, cold aqueous (CAQ) and boiled aqueous (BAQ) extracts of <i>H. petiolare</i> were investigated. <b>Methods: </b>The cytotoxic and glucose utilization effects of the extracts were evaluated using L6 myocytes and HepG2 (C3A) hepatocytes. α-amylase, α-glucosidase and lipase inhibition assays were also carried out. <b>Results: </b>The ethanol extract showed significant cytotoxic effects in the treated cells. Both BAQ and CAQ extracts significantly increased glucose uptake in L6 and C3A cell lines. The CAQ extract enhanced glucose uptake more in the L6 myocytes than in the C3A cell-lines hepatocytes. The BAQ extract showed higher levels of inhibition on α–amylase and α-glucosidase than CAQ. The activities were not significantly different from acarbose. However, BAQ showed lower lipase inhibition than acarbose (p&lt;0.05). <b>Conclusions: </b>The BAQ and CAQ extracts of <i>H. petiolare</i> may, therefore, contain pharmacologically active and relatively non-toxic hypoglycaemic chemicals, which may be effective substitutes in the treatment of diabetes mellitus.
DOI: 10.6084/m9.figshare.13035002.v1
title: In-vitro evaluation of the anti-diabetic potential of Helichrysum petiolare Hilliard & B.L. Burtt using HepG2 (C3A) and L6 cell lines

description: <b>Background: </b><i>Helichrysum petiolare</i> Hilliard & B.L. Burtt has been listed in a survey of plants used in traditional medicine for the treatment of type 2 diabetes in the Eastern Cape of South Africa. In this study, the antidiabetic potentials of ethanol, cold aqueous (CAQ) and boiled aqueous (BAQ) extracts of <i>H. petiolare</i> were investigated. <b>Methods: </b>The cytotoxic and glucose utilization effects of the extracts were evaluated using L6 myocytes and HepG2 (C3A) hepatocytes. α-amylase, α-glucosidase and lipase inhibition assays were also carried out. <b>Results: </b>The ethanol extract showed significant cytotoxic effects in the treated cells. Both BAQ and CAQ extracts significantly increased glucose uptake in L6 and C3A cell lines. The CAQ extract enhanced glucose uptake more in the L6 myocytes than in the C3A cell-lines hepatocytes. The BAQ extract showed higher levels of inhibition on α–amylase and α-glucosidase than CAQ. The activities were not significantly different from acarbose. However, BAQ showed lower lipase inhibition than acarbose (p&lt;0.05). <b>Conclusions: </b>The BAQ and CAQ extracts of <i>H. petiolare</i> may, therefore, contain pharmacologically active and relatively non-toxic hypoglycaemic chemicals, which may be effective substitutes in the treatment of diabetes mellitus.
DOI: 10.6084/m9.figshare.13055813
title: R0235_20181112a_videos

description: Rat 0235, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12998693
title: Quantifying the trade-off between cost-efficiency and public acceptance for onshore wind

description: <i>Abstract: Cost-efficiency and public acceptance are competing objectives for onshore wind locations. We quantify the link between economic wind resources and beautiful landscapes with over 1.5 million ‘scenicness’ ratings of around 200,000 geotagged photographs from across Great Britain. We find evidence that planning applications for onshore wind are more likely to be rejected when proposed in more scenic areas. Compared to the technical potential of onshore wind of 1700 TWh at total costs of £280 billion, removing the 10% most scenic areas implies about 18% lower generation potential and 8-26% higher costs. We consider connection distances to the nearest electricity network transformer for the first time, showing that the connection costs constitute up to half of the total costs. The results provide a quantitative framework for researchers and policymakers to consider the trade-offs between cost-efficiency and public acceptance for onshore wind.</i><i><br></i><i>This dataset contains four Excel files with results for the four scenarios in our paper: <br></i>· Individual wind polygons[1] without network connections, <i>Turbine_no_conn</i> · Individual wind polygons with individual network connections to the nearest transformer, <i>Turbine_conn</i> · Wind polygons clustered into wind parks with network connections to the nearest transformer, based on the maximisation of the energy yield, <i>Wind_parks_EYield</i> – employed here as the “reference” scenario as considered most realistic · Wind polygons clustered into wind parks with network connections to the nearest transformer, based on the minimisation of the LCOEs, <i>Wind_parks_LCOE</i> <br>Another dataset contains the Regression data for wind project planning outcomes.<br> [1] A wind polygon is a suitable area for onshore wind plants, with space for one or more turbines, derived as outlined in the methods section. <i></i>
DOI: 10.6084/m9.figshare.13055813.v1
title: R0235_20181112a_videos

description: Rat 0235, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.13048811
title: LinkedIn skill co-occurrence dataset

description: From the LinkedIn users who identify themselves in the “computer software” industry on their profile and listed at least two skills, we sample about 340,000 users and their skills. To remove skills that are too rare or erroneously typed, we dropped skills appeared less than 100 times in our dataset. <br># `skill_count.tsv`<br>This file contains the frequency of each skill. <br>The first column is the name of the skill; The second column is the number of users who listed the skill; the third column is the total number of users in our dataset. <br><br># `skill_pair_count.tsv` <br>This file contains the co-occurrence between each pair of skills.<br>The first two columns are skill names and the third column is the frequency of co-occurrences. <br>
DOI: 10.7273/qk0q-hj11
title: Supplemental Information and Data: Integrating metapopulation dynamics into a Bayesian Network Relative Risk Model: Assessing the risk of pesticides to Chinook salmon (Oncorhynchus tshawytscha) in an ecological context

description: The population level is often the biological endpoint addressed in ecological risk assessments (ERAs). However, ERAs tend to ignore the metapopulation structure, which precludes an understanding of how population viability is affected by multiple stressors (e.g., toxicants and environmental conditions) at large spatial scales. Here we integrate metapopulation model simulations into a regional-scale, multiple stressors risk assessment (Bayesian network relative risk model, BN-RRM) of organophosphate (OP) exposure, water temperature, and dissolved oxygen impacts on Chinook salmon (Oncorhynchus tshawytscha). A matrix metapopulation model was developed for spring Chinook salmon in the Yakima River Basin (YRB), WA, including three locally adapted subpopulations and hatchery fish that interact with those subpopulations. Three metapopulation models (an exponential model, a ceiling density-dependent model, and an exponential model without dispersal) were integrated into the BN-RRM to evaluate the effects of population model assumptions on risk calculations. Risk was defined as the % probability that the abundance of a subpopulation would decline from their initial abundance (500,000). This definition of risk reflects the Puget Sound Partnership’s management goal of achieving “no net loss” of Chinook abundance. BN-RRM model results for projection year 20 showed that risk (in % probability) from OPs and environmental stressors was higher for the wild subpopulations - the American River (50.9-97.7%) and Naches (39.8-84.4%) spring Chinook - than for the hatchery population (CESRF 18.5-46.5%) and the Upper Yakima subpopulation (21.5-68.7%). Metapopulation risk was higher in summer (58.1-68.7%) than in winter (33.6-53.2%), and this seasonal risk pattern was conserved at the subpopulation level. To reach the management goal in the American River spring Chinook subpopulation, the water temperature conditions in the Lower Yakima River would need to decrease. We demonstrate that 1) relative risk can vary across a metapopulation's spatial range, 2) dispersal among patches impacts subpopulation abundance and risk, and 3) local adaptation within a salmon metapopulation can profoundly impact subpopulation responses to equivalent stressors.
DOI: 10.5517/ccdc.csd.cc251019
title: CCDC 1996959: Experimental Crystal Structure Determination

description: Related Article: Seiji Ogo, Tatsuya Ando, Le Tu Thi Minh, Yuki Mori, Takahiro Matsumoto, Takeshi Yatabe, Ki-Seok Yoon, Yukio Sato, Takashi Hibino, Kenji Kaneko|2020|Chem.Commun.|56|11787|doi:10.1039/D0CC04789A
DOI: 10.5517/ccdc.csd.cc25102b
title: CCDC 1996960: Experimental Crystal Structure Determination

description: Related Article: Seiji Ogo, Tatsuya Ando, Le Tu Thi Minh, Yuki Mori, Takahiro Matsumoto, Takeshi Yatabe, Ki-Seok Yoon, Yukio Sato, Takashi Hibino, Kenji Kaneko|2020|Chem.Commun.|56|11787|doi:10.1039/D0CC04789A
DOI: 10.5517/ccdc.csd.cc2547f0
title: CCDC 2000071: Experimental Crystal Structure Determination

description: Related Article: Sanjukta Pahar, V. S. V. S. N. Swamy, Tamal Das, Rajesh G. Gonnade, Kumar Vanka, Sakya S. Sen|2020|Chem.Commun.|56|11871|doi:10.1039/D0CC05202G
DOI: 10.5517/ccdc.csd.cc2547g1
title: CCDC 2000072: Experimental Crystal Structure Determination

description: Related Article: Sanjukta Pahar, V. S. V. S. N. Swamy, Tamal Das, Rajesh G. Gonnade, Kumar Vanka, Sakya S. Sen|2020|Chem.Commun.|56|11871|doi:10.1039/D0CC05202G
DOI: 10.5517/ccdc.csd.cc254b3s
title: CCDC 2000154: Experimental Crystal Structure Determination

description: Related Article: Sanjukta Pahar, V. S. V. S. N. Swamy, Tamal Das, Rajesh G. Gonnade, Kumar Vanka, Sakya S. Sen|2020|Chem.Commun.|56|11871|doi:10.1039/D0CC05202G
DOI: 10.5517/ccdc.csd.cc2547h2
title: CCDC 2000073: Experimental Crystal Structure Determination

description: Related Article: Sanjukta Pahar, V. S. V. S. N. Swamy, Tamal Das, Rajesh G. Gonnade, Kumar Vanka, Sakya S. Sen|2020|Chem.Commun.|56|11871|doi:10.1039/D0CC05202G
DOI: 10.5517/ccdc.csd.cc2570dv
title: CCDC 2002736: Experimental Crystal Structure Determination

description: Related Article: Sanjukta Pahar, V. S. V. S. N. Swamy, Tamal Das, Rajesh G. Gonnade, Kumar Vanka, Sakya S. Sen|2020|Chem.Commun.|56|11871|doi:10.1039/D0CC05202G
DOI: 10.25505/fiz.icsd.cc244n10
title: CSD 1970671: Experimental Crystal Structure Determination

description: Related Article: Sijie Wu, Zhou Wu, Xiao-Li Wang, Xiang Wang, Rui Zhou, Dong-Sheng Li, Tao Wu|2020|Dalton Trans.|49|13276|doi:10.1039/D0DT02454F
DOI: 10.25505/fiz.icsd.cc244n21
title: CSD 1970672: Experimental Crystal Structure Determination

description: Related Article: Sijie Wu, Zhou Wu, Xiao-Li Wang, Xiang Wang, Rui Zhou, Dong-Sheng Li, Tao Wu|2020|Dalton Trans.|49|13276|doi:10.1039/D0DT02454F
DOI: 10.5281/zenodo.4068559
title: 5G-PICTURE_Smart_City_Demo_UNIVBRIS

description: Data Set collected during the 5G-PICTURE Smart City Demonstration in Bristol Before, during and after the Smart City demonstration several datasets were collected at Millennium Square in Bristol. Several data collection points has been captured as: i) data measured from probes within the network especially form the key network switches and main service router part of the test network ii) end to end data capture between UEs and the host server inside Smart Internet Lab Data Centre. For more information please refer to the project web site https://www.5g-picture-project.eu/ and deliverables D6.3 and D1.1
DOI: 10.5281/zenodo.4068558
title: 5G-PICTURE_Smart_City_Demo_UNIVBRIS

description: Data Set collected during the 5G-PICTURE Smart City Demonstration in Bristol Before, during and after the Smart City demonstration several datasets were collected at Millennium Square in Bristol. Several data collection points has been captured as: i) data measured from probes within the network especially form the key network switches and main service router part of the test network ii) end to end data capture between UEs and the host server inside Smart Internet Lab Data Centre. For more information please refer to the project web site https://www.5g-picture-project.eu/ and deliverables D6.3 and D1.1
DOI: 10.15468/revw7s
title: A new species of Chaetopterus (Annelida: Chaetopteridae) from eastern Canada, with a redescription of Chaetopterus norvegicus M. Sars, 1835

description: This dataset contains the digitized treatments in Plazi based on the original journal article Moore, Jenna M., Gagnon, Jean-Marc, Petersen, Mary E. (2020): A new species of Chaetopterus (Annelida: Chaetopteridae) from eastern Canada, with a redescription of Chaetopterus norvegicus M. Sars, 1835. European Journal of Taxonomy 720: 19-34, DOI: https://doi.org/10.5852/ejt.2020.720.1111
DOI: 10.6084/m9.figshare.12601640
title: Saturates and aromatics characterization in heavy crude oil upgrading using Ni–Co/γ-Al<sub>2</sub>O<sub>3</sub> catalysts

description: The saturates and aromatic constituents of the resulting light crude oil during catalytic and thermal upgrading of Omani heavy crude oil were further characterized to elucidate the crucial role of Ni–Co/γ-Al<sub>2</sub>O<sub>3</sub> catalyst and gas media. GC-MS analysis confirms that water-gas shift reaction (WGSR) promotes a type of hydrogenation reaction resulting in higher saturates contents of the upgraded oil in nitrogen media. In a bid to buttress the relevance of the catalyst, C<sub>7</sub>–C<sub>30</sub> homologous series results show that the quantities of marketable components in the crude oil were higher with catalytic upgrading than thermal cracking.