cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15256959
title: Simulation of mechanical ventilated patients to calculate ventilator-free days.

description: This annotated R code presents a function designed to generate a simulated dataset. The primary objective of this dataset is to replicate a trial involving a control group and an experimental group comprised of initially ventilated patients, with the intention of calculating ventilator-free days (VFDs). Two key variables are simulated: survival and extubation.

The function was used to create multiple datasets by varying survival rates and durations of ventilation. Subsequently, various statistical models were evaluated for statistical power and type I error rates to determine the most effective method for analyzing VFDs.
DOI: 10.15468/dl.pjswrb
title: Occurrence Download

description: A dataset containing 902 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Brunei Darussalam, Cambodia, Indonesia, Lao People’s Democratic Republic, Malaysia, Myanmar, Philippines, Singapore, Timor-Leste, Thailand, Viet Nam)",
 "TaxonKey is Polygonum L."
 ]
}

 The dataset includes 902 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008349-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.abwbs6
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sorbus commixta",
 "Country is Norway",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010604-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d3dbyr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_2_GID","value":"TUR.26.6_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006811-260108223611665/datasets/export for details.
DOI: 10.3535/e9m-djr-pkg
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rjj-qba-h72
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9qm-3qt-pcs
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qfx-vqx-x5s
title: Balclutha Kirkaldy, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cga-zlh-st9
title: Bison C. H. Smith, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h14-vve-5t4
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z8d-hst-fst
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hd0-35h-3el
title: Bison C. H. Smith, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qen-y0x-80r
title: †Spirifer Sowerby, 1818

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3p5-vzk-ckg
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2s9-nyb-ce1
title: Equus (Equus) caballus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fzl-37l-1k4
title: Crinoidea Miller, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mbz-gkz-j3m
title: †Discocyclina augustae van der Weijden, 1940

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.16900207
title: Ipseity Daily Data

description: At what rate do individuals say they are X?

Begining on 2025-07-08, I surveyed a small random sample of American adults on a daily cadence.  They responded to many items of the form: Does <signifier> describe you today?

The file ipseity-daily-aggregated.csv in this repository contains the aggregated results through 2025-07-28.  The columns are as follows:



signifier - a word, phrase or emoji

yes_count - the number of respondents who answered yes (aggregated all-time).

no_count - the number of respondents who answered no (aggregated all-time).

prevalence_per_10k - an estimate of the prevalence per 10,000.  If we were to survey 10,000 American adults, how many would we expect to respond yes to this signifier?  The number is calculated as yes_count / (yes_count + no_count) * 10,000.

earliest_obs_date - this date represents the first time this particular signifier was ever displayed to a respondent.  Signifiers are chosen with stochasticity from a long list; new signifiers are sometimes added, old signifiers are sometimes deleted, and a signifier may be moved higher or lower in priority for sampling.

latest_obs_date - the date closest to the present date on which signifier was most recently presented to a respondent.


Version created on 2025-08-19 — cumulative data.
DOI: 10.3535/pkq-aml-wng
title: Phacops

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9lk-9qg-879
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/38s-sk7-lkb
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9q5-31c-4zw
title: Balclutha Kirkaldy, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3nm-224-sp3
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6gn-zv8-e9h
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/81y-9ew-188
title: †Palaeocardita trapezoidalis (Krumbeck, 1913)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8g1-fk8-fqt
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s9k-w6v-4mk
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y05-h1d-0kr
title: Bison C. H. Smith, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pej-ry4-pqg
title: Desmanini Thomas, 1912

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qw1-byp-1ys
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g2p-9e9-x0s
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8py-cre-cce
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mst-8mh-dxa
title: Balclutha Kirkaldy, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/00m-lr6-v0m
title: Isurus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5cj-y1n-g18
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r45-y9l-ab7
title: Balclutha Kirkaldy, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y9f-qrf-89f
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.ttr8w3
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is University of Michigan Herbarium",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is August",
 "OccurrenceStatus is Present",
 "TaxonKey is Geopora cooperi",
 "Year 2004-2004"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021838-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/dbh-qy1-4pt
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dyk-zl5-ht7
title: Equus (Equus) caballus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2n1-bdb-8j7
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8lb-crv-8y7
title: Bison C. H. Smith, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.ggkt5m
title: Occurrence Download

description: A dataset containing 275 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-30000.0",
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "TaxonKey is Bitis caudalis"
 ]
}

 The dataset includes 275 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015519-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.frhvfh
title: Occurrence Download

description: A dataset containing 331 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epinephelus morrhua"
 ]
}

 The dataset includes 331 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015520-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m4gbus
title: Occurrence Download

description: A dataset containing 1267 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pseudocrenilabrus philander)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 1267 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015521-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.egdzkq
title: Occurrence Download

description: A dataset listing the 16 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Zimbabwe",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Apidae"
 ]
}

 The dataset's 16 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015512-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f4498a
title: Occurrence Download

description: A dataset containing 753 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pangasianodon hypophthalmus"
 ]
}

 The dataset includes 753 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015522-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/33fc08cb26a144b23ea6e7383d74274e
title: Bird and forest communities in a northern Michigan jack pine stand before and after logging, 2013-2018

description: This package contains data associated with documentation of breeding-season bird communities in a dry, jack pine and mixed red pine-jack pine forest in Marquette Co., MI. In addition to repeated surveys, 2014-2018, of bird presence in a network of 45 study plots, the package includes vegetation data collected on the same plots 2013-2017. At initiation of the study, the stand was &gt;100 years old and had experienced little or no active management. During the study period, stands were thinned to reduce fire risk, and most jack pine were cut; three plots fell in a control area with no logging. Bird communities and vegetation were sampled repeatedly before and after management activities. Subsequent to the study period, a managed burn affected much of the study area.
DOI: 10.57967/hf/6150
title: FISH_spots
DOI: 10.15468/dl.esbevu
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ACE6821"
 ]
}

 The dataset includes 20 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015526-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3byfhd
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Iguana iguana",
 "Country is Antigua and Barbuda",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015523-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.unvwnm
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Iguana iguana",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 12 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015524-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pqek2p
title: Occurrence Download

description: A dataset containing 4982 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "TaxonKey is one of (Eira barbara [GBIF Backbone Taxonomy])"
 ]
}

 The dataset includes 4982 records from 251 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015525-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/smdsbb
title: FIELDMAPS Data Archive

description: Repository for all the data used by the SOFIA Legacy Survey FIELDMAPS. These include SOFIA, Herschel, and Planck data. See the "Readme" file for more details. We recommend viewing the dataset in "Tree" view to better visualize the structure of the different subfolders.
DOI: 10.15468/dl.vnd9ka
title: Occurrence Download

description: A dataset containing 3815 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Eubleekeria splendens)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 3815 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015527-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.musug4
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ADC2027"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015529-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uku7x3
title: Occurrence Download

description: A dataset containing 37750 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (Germany, Poland, Liechtenstein, Czechia, Slovakia, Austria, Hungary, Switzerland)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Parus major",
 "Year 1990-1999"
 ]
}

 The dataset includes 37750 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015528-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x3gdvr
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Iguana iguana",
 "Country is Bahamas",
 "HasCoordinate is true"
 ]
}

 The dataset includes 88 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015530-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9dbbk5
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Iguana iguana",
 "Country is Dominica",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015531-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xa7jxk
title: Occurrence Download

description: A dataset containing 165 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abramites eques"
 ]
}

 The dataset includes 165 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015532-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pjvamt
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sturisoma graffini)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015534-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c56m33g9k
title: MassIVE MSV000098727 - Zebrafish larvae proteome after exposure to tramadol and o-desmethyltramadol: raw data
title: The presence of pharmaceuticals in natural habitats is an increasing concern. In particular, the antidepressant tramadol (TRA) and its metabolite o-desmethyltramadol (OTRA). However, investigation of their impact on fish, particularly on their proteome, still needs attention. Zebrafish larvae were exposed to 0.1 or 100 ug/L of TRA or OTRA until reaching 168 hpf. The larvae proteome was then investigated through shotgun proteomics, employing the filter-aided sample preparation method (FASP) followed by high-throughput LC-MS/MS analysis.
DOI: 10.5281/zenodo.16743350
title: Synthetic molecular line observations of the first hydrostatic core from chemical calculations (RHD)

description: Chemistry files for the radiation hydrodynamical models of Young et al. (2019).

These are binary files and are readable with Splash: https://splash-viz.readthedocs.io/en/latest/

The files contain physical and chemistry data for snapshots of a collapsing protostellar core to stellar core formation. The SPH simulation was run with sphNG and the chemistry calculation was conducted as a post-process with Krome.
DOI: 10.5281/zenodo.16743351
title: Synthetic molecular line observations of the first hydrostatic core from chemical calculations (RHD)

description: Chemistry files for the radiation hydrodynamical models of Young et al. (2019).

These are binary files and are readable with Splash: https://splash-viz.readthedocs.io/en/latest/

The files contain physical and chemistry data for snapshots of a collapsing protostellar core to stellar core formation. The SPH simulation was run with sphNG and the chemistry calculation was conducted as a post-process with Krome.
DOI: 10.15468/dl.brpuda
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AAC6284"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015535-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wdyzx6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Iguana iguana",
 "Country is Israel",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015536-250802193616735/datasets/export for details.
DOI: 10.15468/dl.dx9e3z
title: Occurrence Download

description: A dataset containing 290 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Iguana iguana",
 "Country is Peru",
 "HasCoordinate is true"
 ]
}

 The dataset includes 290 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015537-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15610071
title: Mouse model of STAT3 mutation resulting in Job's Syndrome diverges from human pathology

description: Additional data for the manuscript "Mouse model of STAT3 mutation resulting in Job’s Syndrome diverges from human pathology".