cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23278328.v1
title: Hsp FPKM

description: FPKM values of Hsp gene of Sinonvacula constricta in different tissues, Vibrio parahaemolyticus and under long-term high temperature stress
DOI: 10.6084/m9.figshare.23278274.v2
title: Hsp FPKM value

description: FPKM values of Hsp gene of Sinonvacula constricta in different tissues, Vibrio parahaemolyticus and under long-term high temperature stress
DOI: 10.6084/m9.figshare.23278274.v1
title: FPKM values of 62 Hsp genes in rzaor clam

description: FPKM values of Hsp gene of Sinonvacula constricta in different tissues, Vibrio parahaemolyticus and under long-term high temperature stress
DOI: 10.6084/m9.figshare.23278265.v1
title: Metadata for DNA samples submitted for sequencing

description: This dataset contains a list of buccal swab and tissue samples collected from Oregon Spotted Frog populations across Canada - including both wild and zoo populations - over the years 2012-2021. Listed are all samples from which DNA was eluted, and which samples were consequently sent for sequencing after passing quality and quantity checks.
DOI: 10.6084/m9.figshare.23278247.v1
title: Metadata for Oregon Spotted Frog DNA samples submitted for sequencing

description: This dataset contains a list of buccal swab and tissue samples collected from Oregon Spotted Frog populations across Canada - including both wild and zoo populations - over the years 2012-2021. Listed are all samples from which DNA was eluted, and which samples were consequently sent for sequencing after passing quality and quantity checks.
DOI: 10.6084/m9.figshare.23277632.v1
title: motif sequences of hsp in razor clam

description: motif sequences of 62 Hsp proteins in Sinonvacula constricta
DOI: 10.6084/m9.figshare.23277518.v1
title: 62 razor clam Hsp protein and cds

description: Sequences of Hsp protein and cds of Sinonvacula constricta
DOI: 10.6084/m9.figshare.23277506.v2
title: FPKM values of 62 Hsp genes in rzaor clam

description: FPKM values of Hsp gene of Sinonvacula constricta in different tissues, Vibrio parahaemolyticus and under long-term high temperature stress
DOI: 10.6084/m9.figshare.23277506.v1
title: FPKM values of 62 HSP genes in rzaor clam

description: FPKM values of Hsp gene of Sinonvacula constricta in different tissues, Vibrio parahaemolyticus and under long-term high temperature stress
DOI: 10.6084/m9.figshare.23277485.v1
title: FPKM values of Hsp genes from different tissues, Vibrio parahaemolyticus and high temperature stress in Sinonvacula constricta

description: FPKM values of Hsp genes from different tissues, Vibrio parahaemolyticus and high temperature stress in Sinonvacula constricta
DOI: 10.6084/m9.figshare.23277458.v1
title: Magmatic arc evolution during the tectonic closure of the Rocas Verdes basin: insights from Cretaceous-earliest Paleocene intrusive rocks of Navarino Island (55°S), Fuegian Andes

description: U-Pb_INS-10d
DOI: 10.6084/m9.figshare.23277455.v1
title: Magmatic arc evolution during the tectonic closure of the Rocas Verdes basin: insights from Cretaceous-earliest Paleocene intrusive rocks of Navarino Island (55°S), Fuegian Andes

description: INS-10d hornblende
DOI: 10.6084/m9.figshare.23277452.v1
title: Magmatic arc evolution during the tectonic closure of the Rocas Verdes basin: insights from Cretaceous-earliest Paleocene intrusive rocks of Navarino Island (55°S), Fuegian Andes

description: INV-05d hornblende
DOI: 10.6084/m9.figshare.23277449.v1
title: Magmatic arc evolution during the tectonic closure of the Rocas Verdes basin: insights from Cretaceous-earliest Paleocene intrusive rocks of Navarino Island (55°S), Fuegian Andes

description: U-Pb_INS-57d
DOI: 10.6084/m9.figshare.23277446.v1
title: Magmatic arc evolution during the tectonic closure of the Rocas Verdes basin: insights from Cretaceous-earliest Paleocene intrusive rocks of Navarino Island (55°S), Fuegian Andes

description: INV-10d biotite
DOI: 10.6084/m9.figshare.23277443.v1
title: Magmatic arc evolution during the tectonic closure of the Rocas Verdes basin: insights from Cretaceous-earliest Paleocene intrusive rocks of Navarino Island (55°S), Fuegian Andes

description: Geochemistry
DOI: 10.6084/m9.figshare.23277440.v1
title: Magmatic arc evolution during the tectonic closure of the Rocas Verdes basin: insights from Cretaceous-earliest Paleocene intrusive rocks of Navarino Island (55°S), Fuegian Andes

description: INS-23d hornblende
DOI: 10.6084/m9.figshare.23277374.v1
title: <strong>Organic matter enrichment and paleo-sedimentary environment reconstruction of lacustrine shale in the second member of the Middle Jurassic Qiketai Formation in Shengbei Sub-sag dataset</strong>

description: This supporting information provides the raw data of total organic carbon (TOC), Rock-Eval pyrolysis, and ratios of major/trace element analysis of shale samples from both the upper and lower unit of the second member of the Middle Jurassic Qiketai Formation in Shengbei sub-sag, Turpan-Hami Basin.
DOI: 10.6084/m9.figshare.23277234.v1
title: Xenotime reveals Caledonian hydrothermal overprint on Neoproterozoic Cu mineralization, East Greenland

description: Supplementary Table A: Zircon U-Pb, xenotime U-Pb and chalcocite Pb-Pb data for reference materials.
DOI: 10.6084/m9.figshare.23277231.v1
title: Xenotime reveals Caledonian hydrothermal overprint on Neoproterozoic Cu mineralization, East Greenland

description: Supplementary Table E: Chalcocite Pb-Pb data for analyses from GL00670, GL00684 and GL00685 (all Cu ± Pb mineralized metasiltstones) and reference material NIST SRM 610.
DOI: 10.6084/m9.figshare.23277219.v1
title: Xenotime reveals Caledonian hydrothermal overprint on Neoproterozoic Cu mineralization, East Greenland

description: Supplementary Table D: Xenotime U-Pb data for analyses from GL00670, GL00684 and GL00685 (all Cu ± Pb mineralized metasiltstones).
DOI: 10.6084/m9.figshare.23277213.v1
title: Xenotime reveals Caledonian hydrothermal overprint on Neoproterozoic Cu mineralization, East Greenland

description: Supplementary Table B: Zircon U-Pb data for analyses from NOA0008 (quartzite) and GL01178 (muscovite-granodiorite).
DOI: 10.48324/dandi.000114/0.230602.1643
title: Oxytocin neurons enable social transmission of maternal behaviour

description: Maternal care, including by non-biological parents, is important for offspring survival. Oxytocin which is released by the hypothalamic paraventricular nucleus (PVN), is a critical maternal hormone. In mice, oxytocin enables neuroplasticity in the auditory cortex for maternal recognition of pup distress. However, it is unclear how initial parental experience promotes hypothalamic signalling and cortical plasticity for reliable maternal care. Here we continuously monitored the behaviour of female virgin mice co-housed with an experienced mother and litter. This documentary approach was synchronized with neural recordings from the virgin PVN, including oxytocin neurons. These cells were activated as virgins were enlisted in maternal care by experienced mothers, who shepherded virgins into the nest and demonstrated pup retrieval. Virgins visually observed maternal retrieval, which activated PVN oxytocin neurons and promoted alloparenting. Thus rodents can acquire maternal behaviour by social transmission, providing a mechanism for adapting the brains of adult caregivers to infant needs via endogenous oxytocin.
DOI: 10.6084/m9.figshare.23269453.v1
title: Video laryngoscopy versus direct laryngoscopy for orotracheal intubation in the out-of-hospital environment: a systematic review and meta-analysis

description: <b>Objective:</b> To determine the effect of video and direct laryngoscopy on first-pass success rates for out-of-hospital orotracheal intubation. <b>Methods:</b> MEDLINE, Embase, and Cochrane databases were searched from inception to January 2023. Out-of-hospital studies comparing video and direct laryngoscopy on either first-pass or overall intubation success were included. A random effects meta-analysis was performed with a primary outcome of first-pass success stratified by clinician type and laryngoscope blade geometry. The secondary outcomes were overall intubation success stratified by clinician type, and intubation time. All hypotheses and subgroup analyses were determined <i>a priori</i>. <b>Results:</b> Twenty-five studies involving 35,489 intubations met inclusion criteria. Substantial heterogeneity (&gt;75%) precluded reporting point estimates for nearly all analyses. For our primary outcome, video laryngoscopy was associated with improved first-pass success in 3/5 physician studies, 4/6 critical care paramedic/registered nurse studies, and 7/10 paramedic studies. Video laryngoscope devices with Macintosh blade geometry were associated with improved first-pass success in 7/10 studies, while devices with hyperangulated geometry were associated with improved first-pass success in 3/7 studies. Overall intubation success was greater with video laryngoscopy in 2/6 studies in the physician subgroup and 9/10 studies in the paramedic subgroup. Video laryngoscopy was not associated with overall intubation success among critical care paramedics/nurses (OR = 1.89, 0.96 to 3.72, I<sup>2</sup> = 34%). Lastly, 4/5 studies found video laryngoscopy to be associated with longer intubation times. <b>Conclusions:</b> We found substantial heterogeneity among out-of-hospital studies comparing video laryngoscopy to direct laryngoscopy on first-pass success, overall success, or intubation time. This heterogeneity was not explained with stratification by study design, clinician type, video laryngoscope blade geometry, or leave-one-out meta-analysis. A majority of studies showed that video laryngoscopy was associated with improved first pass success in all subgroups, but only for paramedics and not physicians when looking at overall success. This improvement was more common in studies that used Macintosh blades than those that used hyperangulated blades. Future research should explore the heterogeneity identified in our analysis with an emphasis on differences in training, clinical milieu, and specific video laryngoscope devices.
DOI: 10.6084/m9.figshare.23255366.v2
title: <strong>Herbicides reduce the severity and sporulation of Phakopsora pachyrhizi in soybean with triple herbicide resistance</strong>

description: <strong>Herbicides reduce the severity and sporulation of Phakopsora pachyrhizi in soybean with triple herbicide resistance</strong>
DOI: 10.6084/m9.figshare.23255366.v1
title: <strong>Herbicides reduce the severity and sporulation of Phakopsora pachyrhizi in soybean with triple herbicide resistance</strong>

description: <strong>Herbicides reduce the severity and sporulation of Phakopsora pachyrhizi in soybean with triple herbicide resistance</strong>
DOI: 10.6084/m9.figshare.23118767.v2
title: <strong>Comparison of SeDuMi and SDPT3 Solvers for Stability of Continuous-time Linear System</strong>

description: SeDuMi and SDPT3 are two solvers for solving Semi-definite Programming (SDP) or Linear Matrix Inequality (LMI) problems. A computational performance comparison of these two are undertaken in this paper regarding the Stability of Continuous-time Linear Systems. The comparison mainly focuses on computational times and memory requirements for different scales of problems. To implement and compare the two solvers on a set of well-posed problems, we employ YALMIP, a widely used toolbox for modeling and optimization in MATLAB. The primary goal of this study is to provide an empirical assessment of the relative computational efficiency of SeDuMi and SDPT3 under varying problem conditions. Our evaluation indicates that SDPT3 performs much better in large-scale, high-precision calculations.
DOI: 10.6084/m9.figshare.22769708.v2
title: SIS materials.

description: We used these materials and the dataset for the study.
DOI: 10.6084/m9.figshare.22769708.v1
title: SIS materials.

description: We used these materials and the dataset for the study.
DOI: 10.6084/m9.figshare.22068371.v1
title: Data: Effects of the invasive swim bladder parasite Anguillicola crassus on health status and condition in the European eel (Journal of Fish Diseases)

description: Data and code used for the analyses in the article "Effects of the invasive swim bladder parasite <em>Anguillicola crassus</em> on health status and condition in the European eel" by Myrenås, E., Näslund, J., Persson, J., Sundin, J., published in Journal of Fish Diseases 2023. See README_DataSets.txt for details on the data. <br> <br>
DOI: 10.6084/m9.figshare.22004417.v3
title: Dataset: Cumulative neutral loss model for fragment detection in HRMS data

description: Dataset containing the HRMS database for construction of the CNL model and a list with database fragments and true negative database fragments that were used to optimize the model. <br> Additionally, for testing of the model, the dataset contains the suspect screening files for evaluation of the correct and wrong detected fragments signals and a file for each dataset containing the extracted signals. The latter contains a list of signals, their true or false classification according to the suspect screening, and whether the CNL score, pearson correlation coefficient, and retention time difference between the signals ans the parent ion.
DOI: 10.6084/m9.figshare.22004417.v2
title: Dataset: Cumulative neutral loss model for fragment detection in HRMS data

description: Dataset containing the HRMS database for construction of the CNL model and a list with database fragments and true negative database fragments that were used to optimize the model. <br> Additionally, for testing of the model, the dataset contains the suspect screening files for evaluation of the correct and wrong detected fragments signals and a file for each dataset containing the extracted signals. The latter contains a list of signals, their true or false classification according to the suspect screening, and whether the CNL score, pearson correlation coefficient, and retention time difference between the signals ans the parent ion.
DOI: 10.6084/m9.figshare.21828840.v2
title: Agro-morphological traits-based genetic diversity assessment on oat (Avena sativa L.) genotypes in the central highlands of Ethiopia

description: Oat genetic diversity
DOI: 10.6084/m9.figshare.21717689.v3
title: Database for Transient Optical Neural Emulation

description: This package will provide all raw data, processed data, and analysis codes, which serve as the base for the manuscript on Transient Optical Neural Emulation. The package contains four folders: <em>Digital_ANN_Primitives</em>, including all scripts needed to reproduce the digital ANN results <em>Scripts</em>, including all scripts needed to reproduce the training and testing results on experimental data <em>MainText</em>, including all processed data and raw experimental data used for figures 2-3 in the main text <em>SupplementaryText</em>, including all processed data and raw experimental data used for figures S2-S11 in the supplementary information. The script folders (1. and 2. in the list above) include README files that list: System requirements Installation instructions Code demos Instructions for use, and Pseudo code. For additional information, please contact the authors. We are happy to help.
DOI: 10.6084/m9.figshare.21641228.v1
title: read_me.txt

description: Data for the paper "ASSESSING BRAZILIAN REPTILES’ ROAD-KILL RISKS USING TRAIT-BASED MODELS". <br> one *.txt file with the description of the files included in the collection ("read_me.txt")
DOI: 10.6084/m9.figshare.21347619.v1
title: Appendix_The gendered dimension of fighting corruption.docx.pdf

description: The following document includes documents that were used for an article. The goal of the paper is a feminist critique of the transnational discourse of gender policies in the particular case of policy proposals against corruption. To this end, we first introduce some main insights from our theoretical frame drawing from feminist critique in the international relations (IR) discipline before introducing the state of the art on the topic of gender in development and critically engaging with some of the most problematic assumptions related to this strategy. Critical frame analysis proves a fruitful tool for our analysis as it helps examine stereotypical framing. Combined with the Gender Equality Policy in Practice (GEPP) approach, through two case studies from Ghana and Indonesia, we demonstrate that one-size-fits-all approaches to empowering women and tackling corruption are unlikely to succeed and that different frames of the gendered dimension of corruption exist in different policy areas.
DOI: 10.6084/m9.figshare.21347619.v2
title: Appendix_The gendered dimension of fighting corruption.docx.pdf

description: The goal of this paper is a feminist critique of the transnational discourse of gender policies in the particular case of policy proposals against corruption. To this end, we first introduce insights from our theoretical frame drawing from feminist critique in the international relations (IR) discipline before introducing the state of the art on the topic of gender in development and critically engaging with some of the most problematic assumptions related to this strategy. Critical frame analysis proves a fruitful tool for our analysis as it helps examine stereotypical framing. Combined with the Gender Equality Policy in Practice (GEPP) approach, through two case studies from Ghana and Indonesia, we identify frames employed in the gender and corruption nexus and demonstrate that one-size-fits-all approaches to empowering women and tackling corruption are unlikely to succeed and that different frames of the gendered dimension of corruption exist in different policy areas. Thus, the ‘incorruptible women’ myth is the fundamental logic behind gender policy efforts of anti-corruption.
DOI: 10.6084/m9.figshare.20920903.v3
title: <strong>A RAD51–ADP double filament structure unveils the mechanism of filament dynamics in homologous recombination</strong>

description: 1. Low-resolution cryo-EM maps superimposed with the proposed intermediate models are provided. <br> 2. Low-resolution cryo-EM maps superimposed with the docking models of the hRAD51-ADP-dsDNA filament are provided.
DOI: 10.6084/m9.figshare.20920903.v2
title: <strong>A RAD51–ADP double filament structure unveils the mechanism of filament dynamics in homologous recombination</strong>

description: 1. Low-resolution cryo-EM maps superimposed with the proposed intermediate models are provided. <br> 2. Low-resolution cryo-EM maps superimposed with the docking models of the hRAD51-ADP-dsDNA filament are provided.
DOI: 10.6084/m9.figshare.20920903.v1
title: A two-stranded RAD51–ADP filament structure unveils the mechanism of filament dynamics in homologous recombination

description: Low-resolution cryo-EM maps superimposed with the proposed intermediate models are provided.
DOI: 10.6084/m9.figshare.20233887.v1
title: roadkill_data6.csv

description: *.csv files with roadkill data for Brazilian reptiles for the paper "ASSESSING BRAZILIAN REPTILES’ ROAD-KILL RISKS USING TRAIT-BASED MODELS".
DOI: 10.6084/m9.figshare.20233884.v1
title: roadkill_data5.csv

description: *.csv files with roadkill data for Brazilian reptiles for the paper "ASSESSING BRAZILIAN REPTILES’ ROAD-KILL RISKS USING TRAIT-BASED MODELS".
DOI: 10.6084/m9.figshare.20233875.v1
title: roadkill_data4.csv

description: *.csv files with roadkill data for Brazilian reptiles for the paper "ASSESSING BRAZILIAN REPTILES’ ROAD-KILL RISKS USING TRAIT-BASED MODELS".
DOI: 10.6084/m9.figshare.20231943.v1
title: roadkill_data3.csv

description: *.csv files with roadkill data for Brazilian reptiles for the paper "ASSESSING BRAZILIAN REPTILES’ ROAD-KILL RISKS USING TRAIT-BASED MODELS".
DOI: 10.6084/m9.figshare.20231940.v1
title: roadkill_data2.csv

description: *.csv files with roadkill data for Brazilian reptiles for the paper "ASSESSING BRAZILIAN REPTILES’ ROAD-KILL RISKS USING TRAIT-BASED MODELS".
DOI: 10.5281/zenodo.7767535
title: Dataset of Bimanual Human-to-Human Object Handovers

description: We present a multi-sensor dataset of bimanual human-to-human object handovers. The dataset consists of 240 recordings obtained from 12 pairs of participants performing bimanual object handovers with 10 objects, and 120 recordings obtained from the same 12 pairs of participants performing unimanual handovers with 5 of those objects. Each recording includes the giver and receiver's 13 upper-body bone position and orientation trajectories, position trajectories for the 27 markers placed on their upper bodies, object position and orientation trajectories, and two RGB-D data streams. The motion trajectories are recorded at 120Hz and the RGB-D streams are recorded at 30Hz. The recordings are annotated with the three handover phases: reach, transfer, and retreat. The dataset also includes four anthropometric measurements of the participants: height, waistline height, arm span, and weight. Our dataset could help investigations of the bimanual reaching motions and grasps utilized by humans while performing handovers. Also, it can be used to train robots to perform bimanual object handovers with humans. More details about the dataset can be found in this paper: https://doi.org/10.1016/j.dib.2023.109277
DOI: 10.6084/m9.figshare.19074188
title: Kraken2 mouse reference database for GL

description: built as described here: https://github.com/nasa/GeneLab_Data_Processing/blob/master/Metagenomics/Estimate_host_reads_in_raw_data/Workflow_Documentation/SW_MGEstHostReads/reference-database-info.md <br> <br> Test fastq files hold 4 read pairs: 1 phage, 1 e. coli, 1 human, 1 mouse
DOI: 10.5281/zenodo.7767534
title: Dataset of Bimanual Human-to-Human Object Handovers

description: We present a multi-sensor dataset of bimanual human-to-human object handovers. The dataset consists of 240 recordings obtained from 12 pairs of participants performing bimanual object handovers with 10 objects, and 120 recordings obtained from the same 12 pairs of participants performing unimanual handovers with 5 of those objects. Each recording includes the giver and receiver's 13 upper-body bone position and orientation trajectories, position trajectories for the 27 markers placed on their upper bodies, object position and orientation trajectories, and two RGB-D data streams. The motion trajectories are recorded at 120Hz and the RGB-D streams are recorded at 30Hz. The recordings are annotated with the three handover phases: reach, transfer, and retreat. The dataset also includes four anthropometric measurements of the participants: height, waistline height, arm span, and weight. Our dataset could help investigations of the bimanual reaching motions and grasps utilized by humans while performing handovers. Also, it can be used to train robots to perform bimanual object handovers with humans. More details about the dataset can be found in this paper: https://doi.org/10.1016/j.dib.2023.109277
DOI: 10.6084/m9.figshare.20231931.v1
title: roadkill_references.txt

description: *.txt file with the references of the roadkill data collected for the paper "ASSESSING BRAZILIAN REPTILES’ ROAD-KILL RISKS USING TRAIT-BASED MODELS".
DOI: 10.6084/m9.figshare.20231823.v1
title: roadnetwork.csv

description: *.csv file with data representing the Brazilian road network for the paper "ASSESSING BRAZILIAN REPTILES’ ROAD-KILL RISKS USING TRAIT-BASED MODELS".
DOI: 10.6084/m9.figshare.20231820.v1
title: species_distribution2.csv

description: *.csv file with data representing the Brazilian reptiles geographical distributions considered for the paper "ASSESSING BRAZILIAN REPTILES’ ROAD-KILL RISKS USING TRAIT-BASED MODELS".
DOI: 10.6084/m9.figshare.20231805.v1
title: species_names.csv

description: *.csv file with a list of Brazilian reptile species recognized as valid for the paper "ASSESSING BRAZILIAN REPTILES’ ROAD-KILL RISKS USING TRAIT-BASED MODELS".
DOI: 10.6084/m9.figshare.19953947.v1
title: Soil microbes under N deposition-dataset

description: Soil microbes under N deposition-dataset
DOI: 10.6084/m9.figshare.19426715.v1
title: Genotype specific CDS - Fasta files

description: Predicted coding sequences form 48 sugarcane transcriptomes