cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.fyr2e8
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cascabela thevetia",
 "Country is Lao People’s Democratic Republic",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020218-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yphb6a
title: Occurrence Download

description: A dataset containing 46155 species occurrences available in GBIF matching the query:
{
 "and" : [
 "MediaType is Image",
 "OccurrenceStatus is Present",
 "TaxonKey is Symplocarpus foetidus"
 ]
}

 The dataset includes 46155 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020214-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.78chy4
title: Occurrence Download

description: A dataset containing 430 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neptis taiwana",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 430 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020219-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15006770
title: Leptacis, SEMC1568463

description: Leptacis, SEMC1568463

ET 075

KIT Synchrotron, 10x
DOI: 10.5281/zenodo.15006771
title: Leptacis, SEMC1568463

description: Leptacis, SEMC1568463

ET 075

KIT Synchrotron, 10x
DOI: 10.15468/dl.aynnd4
title: Occurrence Download

description: A dataset containing 308152 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tilia cordata"
 ]
}

 The dataset includes 308152 records from 1486 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020152-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b4zqq8
title: Occurrence Download

description: A dataset containing 1458768 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Branta leucopsis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 1458768 records from 532 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020145-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15236044
title: Parents' dispositional mindfulness and child behavior: The mediating role of the child dispositional mindfulness

description: This record contains raw data related to the article "Parents' dispositional mindfulness and child behavior: The mediating role of the child dispositional mindfulness”.In order to request the data you need to contact Dott. Pietro Muratori at the following email: pietro.muratori@fsm.unipi.it
DOI: 10.5281/zenodo.15236045
title: Parents' dispositional mindfulness and child behavior: The mediating role of the child dispositional mindfulness

description: This record contains raw data related to the article "Parents' dispositional mindfulness and child behavior: The mediating role of the child dispositional mindfulness”.In order to request the data you need to contact Dott. Pietro Muratori at the following email: pietro.muratori@fsm.unipi.it
DOI: 10.5258/soton/d3451
title: Data in support of the paper 'Assessing the application of landmark-free morphometrics to macroevolutionary analyses'

description: This data is the primary data used in the manuscript titled: 'Assessing the application of landmark-free morphometrics to macroevolutionary analyses' published in BMC Ecology and Evolution. 

The DOI for this dataset is: https://doi.org/10.5258/SOTON/D3451. This link includes: (1) Inputs.zip: The input data for each analysis conducted in the manuscript, including the .vtk mesh files and .xml files for each analysis; (2) Aligned_Only_Analysis_Outputs.zip: The output files from the Deterministic Atlas Analysis (DAA) using the Aligned-Only mesh data; (3) Poisson_Mesh_Analysis_Outputs.zip: The output files from the Deterministic Atlas Analysis (DAA) using the Poisson mesh data. 

All additional data related to the paper "Assessing the application of landmark-free morphometrics to macroevolutionary analyses" can be found here or on the GitHub: https://github.com/JamesMulqueeney/Deterministic-Atlas-Analysis.

All code and scripts are either in Python or R. Extensive descriptions on the methodology and functions can be found at https://gitlab.com/icm-institute/aramislab/deformetrica/-/wikis/home and the full descriptions of the pipeline can be found at https://gitlab.com/ntoussaint/landmark-free-morphometry.
DOI: 10.15468/dl.fqx2ua
title: Occurrence Download

description: A dataset containing 5699 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cedrela odorata L."
 ]
}

 The dataset includes 5699 records from 321 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025163-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mldj5e
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zinnia elegans Sessé & Moc."
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033502-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dxmwsz
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Protozoa",
 "DecimalLatitude is greater than 41.365333126032",
 "DecimalLatitude is less than 41.9065736102008",
 "DecimalLongitude is greater than -71.2834993417837",
 "DecimalLongitude is less than -70.5611034471788"
 ]
}

 The dataset includes 90 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007329-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.na6k62
title: Occurrence Download

description: A dataset containing 657849 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Bivalvia)",
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 657849 records from 173 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046967-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pa5jmc
title: Occurrence Download

description: A dataset containing 1317 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Setonix brachyurus (Quoy & Gaimard, 1830)"
 ]
}

 The dataset includes 1317 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069811-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cnzupu
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Lissarca notorcadensis BAS CAML"
 ]
}

 The dataset includes 64 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007329-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k9npq5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is BOLD:AAK7165",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115920-210914110416597/datasets/export for details.
DOI: 10.25574/csc2.obs.19630
title: Chandra X-ray Observatory ObsId 19630

description: CSC uses combined (i.e. overlapping) Chandra observations for detecting X-ray sources. This allows the catalog to include significantly fainter sources than CSC 1.1. The set of overlapping observations that have been combined in this way is known as a "stack".
DOI: 10.15468/dl.acuyfj
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sphyrna media Springer, 1940"
 ]
}

 The dataset includes 123 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019644-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9zvx37
title: Occurrence Download

description: A dataset containing 781 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-100.278 20.395,-100.253 20.395,-100.253 20.421,-100.278 20.421,-100.278 20.395))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 781 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0387427-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vmvczv
title: Occurrence Download

description: A dataset containing 229 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euphorbia antiquorum L."
 ]
}

 The dataset includes 229 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050602-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cfvnt2
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Glaphyropteridopsis villosa Ching & W.M.Chu"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047472-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7xkbhj
title: Occurrence Download

description: A dataset containing 250422 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Biodiversity Research and Teaching Collections - TCWC Vertebrates"
 ]
}

 The dataset includes 250422 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066023-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.htrjxw
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhogeessa genowaysi Baker, 1984"
 ]
}

 The dataset includes 17 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041458-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7d2rhh
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Athyrium xichouense Y.T.Hsieh & Z.R.Wang"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050600-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rgzajc
title: Occurrence Download

description: A dataset containing 2181 species occurrences available in GBIF matching the query:
{
 "and" : [
 "MediaType is Image",
 "PublishingOrg is 90fd6680-349f-11d8-aa2d-b8a03c50a862",
 "TaxonKey is Convolvulaceae"
 ]
}

 The dataset includes 2181 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044903-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.acqe2q
title: Occurrence Download

description: A dataset containing 6063843 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Parus major Linnaeus, 1758"
 ]
}

 The dataset includes 6063843 records from 1492 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060200-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11638299
title: MD simulation of 50-lipid POPC monolayers in the water-air interface (CHARMM36+OPC4@298.15K)

description: About these systems:

This record contains the simulation files of 50-lipid POPC monolayers simulated in the water-air interface.

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 100 ns long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, CHARMM36 parameters for the lipids and the 4-point OPC water model were used.

Files provided:



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as POPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.11638300
title: MD simulation of 50-lipid POPC monolayers in the water-air interface (CHARMM36+OPC4@298.15K)

description: About these systems:

This record contains the simulation files of 50-lipid POPC monolayers simulated in the water-air interface.

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 100 ns long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, CHARMM36 parameters for the lipids and the 4-point OPC water model were used.

Files provided:



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TRR of the simulation, trajectory in TRR format, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as POPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.14639026
title: MD simulation of 50-lipid POPC monolayers in the water-air interface (CHARMM36+OPC4@298.15K)

description: About these systems:

This record contains the simulation files of 50-lipid POPC monolayers simulated in the water-air interface.

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 100 ns long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, CHARMM36 parameters for the lipids and the 4-point OPC water model were used.

Files provided:



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as POPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.15468/dl.yjcc6t
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Palicourea hoffmannseggiana (Willd. ex Schult.) Borhidi)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 31 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017806-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zqjwa3
title: Occurrence Download

description: A dataset containing 771768 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Xeno-canto - Bird sounds from around the world"
 ]
}

 The dataset includes 771768 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017756-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11638803
title: MD simulation of 100-lipid POPC monolayers in the water-air interface (CHARMM36+OPC4@298.15K)

description: About these systems:

This record contains the simulation files of 100-lipid POPC monolayers simulated in the water-air interface.

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 100 ns long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, CHARMM36 parameters for the lipids and the 4-point OPC water model were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as POPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.11638804
title: MD simulation of 100-lipid POPC monolayers in the water-air interface (CHARMM36+OPC4@298.15K)

description: About these systems:

This record contains the simulation files of 100-lipid POPC monolayers simulated in the water-air interface.

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 100 ns long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, CHARMM36 parameters for the lipids and the 4-point OPC water model were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TRR of the simulation, trajectory in TRR format, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as POPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.5281/zenodo.14639081
title: MD simulation of 100-lipid POPC monolayers in the water-air interface (CHARMM36+OPC4@298.15K)

description: About these systems:

This record contains the simulation files of 100-lipid POPC monolayers simulated in the water-air interface.

The initial strcuture of the systems was assembled using CHARMM-GUI, and equilibrated with GROMACS by following their recommended protocol. The membrane was then compressed and expanded in a simulation using PLUMED, from which states at different values of area per lipid were extracted.

Each of these systems was the initial state of a 100 ns long simulation in the NVT ensemble (T=298.15 K), the ones here provided.

For all simulations, CHARMM36 parameters for the lipids and the 4-point OPC water model were used.

Files provided: 



Compressed file with all ITP files with the parameters used for the simulations.

MDP file used for the production simulations.

For each simulation, TOP with the topology, TPR of the simulation, trajectory in TRR format, EDR file, CPT generated and GRO with the final state of the system. All files corresponding to the same simulation are labeled as POPC_NVT_XX, where XX is the nominal APL at which the simulations were carried out.
DOI: 10.15468/dl.f86gt3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Palicourea juarezana (C.M.Taylor & Lorence) Borhidi)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017807-250127130748423/datasets/export for details.