cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14972259.v1
title: Data and code for analysis of spatiotemporal variation in traits and environmental variables in European hole-nesting passerines

description: Files:<br> trait_data.csv – a comma-delimited file with population-specific annual fitness-related trait data. Traits included: laying date (LD, laying date of the first egg, where 1 = April 1st), clutch size (CS, number of eggs) and fledgling number (FN, number of nestlings 13-16 days after hatching). Annual values for these traits were based on data from individual broods that were not subjected to experimental manipulations (e.g. clutch size manipulation or cross-fostering). Fledgling numbers were based on broods with at least one fledgling. <br> location_data.csv – a comma-delimited file with latitude and longitude (in decimal degrees) for all 44 locations. <br> climate_data.csv – a comma-delimited file with location-specific annual climate data. Climate variables included: North Atlantic Oscillation (NAO) index, mean temperature (in degrees Celsius) and mean precipitation (in mm). For each climate variable, we give the average over daily values in February-May.<br> <br> data_information.csv – a comma-delimited file with a supplementary table on data owners and geographical information per location, study length per population, and sample sizes per trait, species, and location.<br> <br> analysis.R - an R file with code to run analyses of temporal variation in trait values, effects of climate variables on trait values, and spatial synchrony in trait values. <br> Climate data sources:<br> Daily NAO-indices were extracted from the Climate Prediction Center of the National Weather Service (https://www.cpc.ncep.noaa.gov).<br> <br> Daily mean temperature and mean precipitation were extracted from the E-OBS gridded dataset version 20.0e (Cornes et al. 2018, DOI: 10.1029/2017JD028200).<br> <br> Daily mean precipitation for Vlieland (Loc: VLI) was extracted from a Royal Dutch Meteorological Institute (KNMI) weather station (Oost-Vlieland; https://www.knmi.nl/nederland-nu/klimatologie/monv/reeksen). <br> See README.docx for more detail. <br>
DOI: 10.6084/m9.figshare.16709572.v1
title: Si_Ternary.tif

description: Data for book "Optical Tweezers: Principles and applications"
DOI: 10.6084/m9.figshare.29080637.v1
title: Dataset.xlsx

description: Dataset representing percentage of vulnerable code found for generated code using LLMs using top 25 CWE.
DOI: 10.6084/m9.figshare.3443753.v1
title: DM ENDO dr leena samdi.xlsx

description: study to examine the prevalence of apical periodontitis (AP) in patients with diabetes mellitus (DM) compared with matched non-diabetic patients and the effect of glycaemic control on the prevalence of AP.
DOI: 10.17632/bv49rfm2wk
title: R&D in China

description: study examines the influence of financial technology (fintech) investments on research and development (R&D) activities among Chinese companies,
DOI: 10.17632/rjmjbkspbx
title: Supplementary data for "Evaluation of a community-based model for PrEP services among bar patrons in rural South Africa"

description: Interview transcripts with participants (n=20) of a pilot study of a community-based model for HIV PrEP services among bar patrons in rural South Africa. Anonymous individual inteviews were conducted with 20 out of 37 pilot participants to evaluate PrEP program barriers, facilitators, and suggestions. Data may be interpreted using thematic analysis.
DOI: 10.6084/m9.figshare.17206622.v1
title: FST,π and Tajima's D values

description: FST,π and Tajima's D values of three strains of <i>Cydia pomonella</i>
DOI: 10.6084/m9.figshare.4732942.v1
title: qPCR sample template

description: Sample qPCR dataset
DOI: 10.6084/m9.figshare.9120026.v1
title: Dataset from Attachment-based mechanisms underlying capture and release of pollen grains

description: Dataset to support this article
DOI: 10.17632/j7khwb3z3r
title: Hybrid-DL-IR-Data

description: The data is for the work of "Hybrid Deep-learning and Iterative Reconstruction Scheme for Medical Imaging Reconstruction, Cell Reports Medicine, 2023".
DOI: 10.17632/p992nhb8ss
title: Dataset for Transient Stability Assessment of IEEE 39-Bus System

description: This dataset contains 50 features and was generated through 12,852 time-domain simulations performed on the IEEE New England 39 bus system test case using DIgSILENT PowerFactory and Python automation. The simulations span diverse operating conditions by varying the generation/load profile from 80% to 120% in 5% increments. For each condition, three-phase short-circuit faults were applied at seven distinct locations (0%, 10%, 20%, 50%, 80%, 90%, 100%) along all transmission lines, with fault clearing times ranging from 0.1s to 0.3s.

Key features captured for each of the 10 generators (G02 is the reference machine) include:

P in MW - Active Power
ut in p.u. - Terminal Voltage
ie in p.u. - Excitation Current
xspeed in p.u. - Rotor Speed
firel in deg - Rotor Angle (relative to G02)

Simulations lasted 10 seconds to ensure accurate transient stability assessment. Post-fault data was sampled every 0.01s from fault clearance up to 0.6s afterward, labeling the stability state as 1 (stable) or 0 (unstable). The dataset generation process took 5,840 seconds. The dataset exhibits a class imbalance, with 42% of cases belonging to the unstable class. All simulation data were exported to .csv files and subsequently unified into a single pickle file (tsa_data.pkl).

Helper scripts are provided:

dataset_loader.py: Includes the load_tsa_data function to load the dataset.
usage.py: Demonstrates how to use the loader module.

This dataset serves as a comprehensive foundation for machine learning applications in transient stability assessment (TSA), offering insights into system behavior under dynamic conditions.
DOI: 10.6084/m9.figshare.16676263.v1
title: Laboratory.csv

description: Laboratory analysed data are gathered in this dataset for selected cholestrerol-lowering film coated tablet medicine. The file includes data collected for 1005 production batches manufactured between 2018 and 2021. Besides critical quality attributes (CQAs), intermediate product attributes, excipient and entering API batches' analysis results are included for each final product batch. Detailed explanation of the data can be found in dataset descriptor publication: "Cholesterol-Lowering Drug Process and Quality Data" (authors: Janja Zagar, Jurij Mihelic). <br>
DOI: 10.6084/m9.figshare.19418170.v1
title: Additional file 16 of Sorting and packaging of RNA into extracellular vesicles shape intracellular transcript levels

description: Additional file 16. Fold changes, adjusted p-values and TPMs for genes in cells treated with GW4869 or not.
DOI: 10.6084/m9.figshare.25040075.v2
title: Efficacy of hydraulic fractures in improving gas production from low-permeability gas hydrate deposits: Insights from numerical simulations

description: These are the archived data for the manuscript "Efficacy of hydraulic fractures in improving gas production from low-permeability gas hydrate deposits: Insights from numerical simulations"<i>.</i>
DOI: 10.6084/m9.figshare.13013885.v2
title: 50K SNP genotypes of 48 Fleckvieh animals

description: The folder contains 50K SNP genotypes of 48 Fleckvieh cattle in the form of ped and map files. Note that the marker positions correspond to the ARS-UCD1.2 cattle assembly, This dataset is used in the paper titled,"A de novo frameshift mutation in <i>ZEB2</i> causes polledness, abnormal skull shape, small body stature and subfertility in Fleckvieh cattle". This is the doi of the paper: 10.1038/s41598-020-73807-5. Please cite this paper, if you decide to use this data.<br>
DOI: 10.6084/m9.figshare.1407384.v2
title: Bayesian Sparse Group Selection

description: This article proposes a Bayesian approach for the sparse group selection problem in the regression model. In this problem, the variables are partitioned into different groups. It is assumed that only a small number of groups are active for explaining the response variable, and it is further assumed that within each active group only a small number of variables are active. We adopt a Bayesian hierarchical formulation, where each candidate group is associated with a binary variable indicating whether the group is active or not. Within each group, each candidate variable is also associated with a binary indicator, too. Thus, the sparse group selection problem can be solved by sampling from the posterior distribution of the two layers of indicator variables. We adopt a group-wise Gibbs sampler for posterior sampling. We demonstrate the proposed method by simulation studies as well as real examples. The simulation results show that the proposed method performs better than the sparse group Lasso in terms of selecting the active groups as well as identifying the active variables within the selected groups. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.19237194.v1
title: For the road: Calibrated maternal investment in light of extracellular symbiont transmission

description: Raw data and statistical analysis of the manuscript entitled "For the road: Calibrated maternal investment in light of extracellular symbiont transmission."<br>
DOI: 10.6084/m9.figshare.24657243.v1
title: Focus Group Discussion Guidance

description: Focus Group Discussion Guidance
DOI: 10.6084/m9.figshare.25525687.v1
title: <b>A Study on the Discourse Power Conflict of Female Gamers' Gender Identification in Games</b>

description: Utilizing the Structural Equation Modeling (SEM) technique and grounded in social identity theory, the research focuses on female players of the popular game "Honor of Kings" (n=249). Adopting the Stressor-Strain-Outcome (SSO) model as the analytical framework, gender identification is viewed as the stressor triggering discourse conflicts for female players.
DOI: 10.15468/dl.3ttk4m
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sagamichthys schnakenbecki (Krefft, 1953)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((51.9067 10.3601,51.6539 10.8496,44.9648 10.8496,44.9648 1.8496,45.9851 1.8496,46.3652 2.0796,48.3314 4.1285,49.4027 5.7662,49.6642 6.5145,51.2543 9.1551,51.377 9.8685,51.7452 10.0272,51.9067 10.3601))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013211-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.14813166.v1
title: Phased Array Doppler Sonar data

description: Phased Array Doppler Sonar datasets of Saltwater 1, Saltwater 2 and CCZF sediment dynamic plume discharges.<br>
DOI: 10.6084/m9.figshare.22662127.v1
title: annotation files of Dalbergia sissoo

description: .10X files were the annotation files of scaffold genome assembly vesion. .chr files were the annotation files of chromosomes genome assembly vesion.
DOI: 10.6084/m9.figshare.29019551.v1
title: Phytase Supplemention in Catfish

description: The present study assessed the effects of phytase on the transcriptomic profiles in the liver and intestine, including samples of 16 and each feeding group with 4 replicates in liver and intestine tissues, respectively. The description of the files is as follows.File Name DescriptionCACFKANXX_s4_1_GSLv3-7_01_SL218208.fastq.gz Control Liver Rep1CACFKANXX_s4_1_GSLv3-7_02_SL218209.fastq.gz Control Liver Rep2CACFKANXX_s4_1_GSLv3-7_03_SL218210.fastq.gz Control Liver Rep3CACFKANXX_s4_1_GSLv3-7_04_SL218211.fastq.gz Control Liver Rep4CACFKANXX_s4_1_GSLv3-7_09_SL218216.fastq.gz Control Intestine Rep1CACFKANXX_s4_1_GSLv3-7_10_SL218217.fastq.gz Control Intestine Rep2CACFKANXX_s4_1_GSLv3-7_11_SL218218.fastq.gz Control Intestine Rep3CACFKANXX_s4_1_GSLv3-7_12_SL218219.fastq.gz Control Intestine Rep4CACFKANXX_s4_1_GSLv3-7_05_SL218212.fastq.gz Phytase Liver Rep1CACFKANXX_s4_1_GSLv3-7_06_SL218213.fastq.gz Phytase Liver Rep2CACFKANXX_s4_1_GSLv3-7_07_SL218214.fastq.gz Phytase Liver Rep3CACFKANXX_s4_1_GSLv3-7_08_SL218215.fastq.gz Phytase Liver Rep4CACFKANXX_s4_1_GSLv3-7_13_SL218220.fastq.gz Phytase Inrestine Rep1CACFKANXX_s4_1_GSLv3-7_14_SL218221.fastq.gz Phytase Inrestine Rep2CACFKANXX_s4_1_GSLv3-7_15_SL218222.fastq.gz Phytase Inrestine Rep3CACFKANXX_s4_1_GSLv3-7_16_SL218223.fastq.gz Phytase Inrestine Rep4<br>
DOI: 10.6084/m9.figshare.7937336.v1
title: Colonoscopy images

description: <b>Original frame image was extracted from colonoscopy video.</b> In this study, colonoscopy was performed using a high-resolution colonoscopy device (CV260SL, Olympus, Tokyo, Japan). Colonoscopy videos were acquired using a video capture card (SkyCaputre U6T, Skydigital, Yongsan, Korea), after signal branching from the CV260SL. The video was converted to an MP4 format to avoid alteration of the resolution, and the resolution was 1920*1080, 30fps. The colonoscopy video was decomposed into frames. A frame was extracted as a PNG file per 0.5 s using Virtualdub software.
DOI: 10.6084/m9.figshare.19304648.v2
title: samplesheet.csv

description: CSV file with all of the accessions and analysis-relevant details for all samples in the study PRJEB49093
DOI: 10.6084/m9.figshare.20705461.v5
title: Now I can teach English in English: Navigating Teachers' Self-Assessment and Institutional Support in Blended Professional Development

description: Now I can teach English in English: Navigating Teachers' Self-Assessment and Institutional Support in Blended Professional Development
DOI: 10.6084/m9.figshare.21770306.v1
title: Supplementary Material for: Accuracy of two visual criteria for the assessment of caries around restorations: a delayed-type cross-sectional study

description: The aim of this study was to compare the performance of two visual criteria used for the detection of caries around restorations in permanent teeth. In this delayed-type cross-sectional study, the study sample was randomly allocated to one of two visual criteria for the assessment of restorations, as follows: a) FDI criteria (International Dental Federation; considers marginal staining, marginal adaptation, and caries recurrence), and b) CARS (Caries Associated with Restorations or Sealants) criteria, defined by the International Caries Classification and Management System. A calibrated examiner assessed the restorations using two reference standards, as follows: i) for restorations requiring operative interventions (repair/replacement), the restoration was partially or totally removed and the presence or absence of carious tissue was assessed; and ii) for restorations requiring non-operative intervention, follow-up for a period of one year was recommended to allow identification of the presence of new lesions not detected at baseline. The sensitivity, specificity, area under Receiver Operating Characteristic (ROC) curve (Az), and accuracy of the criteria were assessed. The study included 305 restorations. The FDI marginal staining parameter had the lowest Az value (Az = 0.501), while similar sensitivity was observed between the CARS (62.0%), FDI presence of caries (65.0%), and FDI marginal adaptation (74.0%) parameters. CARS exhibited the highest specificity (88.3%) and accuracy (85.6%). The CARS criteria exhibited better specificity and accuracy in detecting caries around restorations, followed by the FDI criteria for caries recurrence and marginal adaptation. Considering marginal staining or combining multiple marginal features to assess secondary caries resulted in an increased risk of false-positive outcomes and over-treatment.
DOI: 10.6084/m9.figshare.24082128.v4
title: Population weighted average Travel Time to nearest 24-hr ED by CSD (csv)

description: Contains the CSD identifier (CSDUID) and the spaces population weighted average travel time to closest 24-hr Emergency department
DOI: 10.6084/m9.figshare.26233508.v2
title: Micronutrientsaredriversofabundance,richnessandcompositionofsoilinsectcommunitiesintropicalrainforests

description: Communities of soil insects in tropical rainforests are among the richest and most complex, but the mechanisms structuring them remain mostly unknown. Identifying whether nutrient availability plays a relevant role in the assembly of these communities poses several challenges due to the diverse nutritional requirements of insects. We investigated the importance of nutrient availability in accounting for the abundance, richness and composition of soil-insect communities in two tropical rainforests. We sampled soil insects 72 one square-meter sampling points across three topographic levels at two sites in French Guiana, counted all specimens and characterized each assemblage using DNA metabarcoding. We then determined the importance of nutrient availability by measuring 19 nutrient concentrations and ratios from pools of litter and topsoil.We collected 18,000 specimens from 17 different orders.Despite an extraordinary diversity and spatial heterogeneity, the concentrations of sodium (Na), potassium (K), magnesium (Mg) and calcium (Ca) positively correlated with either the abundance or the richness of the communities. We found similar relationships when analyzing the data separately for Blattodea, Coleoptera, Hymenoptera and Orthoptera, the most abundant insect orders with the most OTUs. These micronutrients were also important predictors of the composition of the assemblages. We did not find effects for nitrogen or phosphorus, and only the concentration of carbon in the litter strongly influenced the compositions of the hymenopteran and orthopteran communities. This lack of effect indicated that the availability of macronutrients was not a relevant driver of the communities in tropical rainforests as it is for plants and microbes, in contrast to micronutrients.Our results demonstrated that the availability of micronutrients played a large role in species selection during the assembly of the soil-insect communities in these tropical rainforests.The high unexplained variance, however, suggests that additional neutral and niche deterministic processes, such as stochastic population drift and biotic interactions, likely play complementary roles in structuring insect communities in the soils of tropical rainforests.
DOI: 10.6084/m9.figshare.28510427.v1
title: Exclusive roaming mechanism for the Cl + C<sub>2</sub>H<sub>2</sub> → C<sub>2</sub>H + HCl bimolecular reaction

description: the related data sets
DOI: 10.6084/m9.figshare.4595938.v1
title: XAS data and instructions

description: XAS raw data and instructions for handling the .prj format data- see paper
DOI: 10.17632/7gkfypb8hf
title: Raw proteomic dataset of prostatic tissue and seminal vesicle fluid from obese, diabetic and control rats

description: Study question: Can obesity and diabetes induced in male rodents alter the proteome of prostatic tissue and seminal vesicle fluid?

The data presented reflect the proteomic profile of prostatic tissue and seminal vesicle fluid from male Wistar rats, distributed into three groups: control, obese, and diabetic. The rats were fed with commercially available chow provided in a controlled manner for the control and diabetic groups, while the obese group received a high-calorie diet with 5% sucrose added to the water, provided ad libitum, for 38 weeks. Diabetes was induced through an injection of streptozotocin (35 mg/kg), 53 days prior to euthanasia. After euthanasia, the prostatic tissues and seminal vesicles (fluids) were dissected, and the samples were homogenized with RIPA buffer containing protease inhibitors. The samples were then subjected to sonication, centrifugation, and the resulting supernatant was used for total protein quantification. Trypsin digestion was performed in-gel, and the prepared samples were analyzed individually by mass spectrometry, with proteomics conducted using a shotgun approach.

The data can be interpreted as follows: there are two folders in the dataset, separated for prostatic tissue and seminal vesicle fluid, divided by control, diabetic, and obese groups, containing all the proteins quantified by animal, properly identified. For each biological sample, there is an Excel spreadsheet with the normalized proteomic data.
DOI: 10.17632/7v5p4gsh4z
title: Data presented in a pharmaceutical-related molecules dataset for reversed-phase chromatography retention time prediction built on combining pH and gradient time conditions - System 3

description: Presented data is introduced in the article "A pharmaceutical-related molecules dataset for reversed-phase chromatography retention time prediction built on combining pH and gradient time conditions". This is a subset with data acquired on chromatographic system 3.
DOI: 10.6084/m9.figshare.24461224.v1
title: AnimalTraceability.rdfAnimal Traceability Ontology

description: An Ontology driven Framework for Animal Traceability. Ontologies to provide intergration and interoperability in Traceability of Animals.
DOI: 10.6084/m9.figshare.25956034.v2
title: Example Data of Tracking-seq: HEK239T chr6

description: Example data of Tracking-seq (only reads from chr6 extracted):HEK293T cells edited with Cas9 + sgRNA VEGFA2Wild type HEK239T cells
DOI: 10.6084/m9.figshare.6128174.v1
title: Settlement data sources

description: Primary data sources of settlement locations used to create the distance raster map.