cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17640
title: Ash Dieback Mortality And Damage At The Botanic Garden Meise, Belgium

description: Four 10m × 10m plots were laid out in the naturally regenerating woodland at the Botanic Garden Meise (WGS84: 50° 55ʹ 37ʺ N, 4° 19ʹ 18ʺ E; 50° 55ʹ 37ʺ N, 4° 19ʹ 17ʺ E; 50° 55' 38.6" N 4° 19ʹ 21ʺ E; 50° 55ʹ 39ʺ N, 4° 19ʹ 29ʺ E). They were selected because the areas contained a large number of ash saplings. Within these plots all ash seedlings greater than 40 cm tall were labelled with a small (2 cm × 4 cm) plastic tag attached with stretchable plant tie. Each tag was engraved with a unique number so that the tree could be identified. These plots were not intended to be replicates but just a convenient method of refinding the tagged trees. In the first year either the height or the girth of the tree was measured with a tape measure, depending upon whether the tree was small enough to measure the height. In the first year and each subsequent year each tree was scored for the apparent damage caused by ash dieback (<em>Hymenoscyphus pseudoalbidus</em>). The same scoring scheme was used as that by Pliūra et al. (2011). This is a 5 point system where 1 is a dead tree; 5 is an undamaged tree and 2–4 are progressively less damaged trees. The plots were laid out on 14 April 2013. In 2014 plots 1 and 2 were scored on 14th April  and plots 3 and 4 on 21st April. In 2015 plots 1 and 2 were scored on 6th May and plots 3 and 4 on 30th April.
description: {"references": ["Pli\u016bra, A., Lygis, V., Suchockas, V. & Bartkevi\u010dius, E. (2011). Performance of twenty four European Fraxinus excelsior populations in three Lithuanian progeny trials with a special emphasis on resistance to Chalara fraxinea. Baltic Forestry 17: 17-34."]}
DOI: 10.5281/zenodo.33629
title: Streptorubin Synthetic Procedure

description: Synthetic procedure  for Streptorubin
DOI: 10.5281/zenodo.33639
title: Simulation Results And Lambda Value Data For Structural Connectome Based Simulations Of Temporal Lobe Epilepsy Surgery.

description: This data file contains a number of matlab matrices holding the results of simulations carried out using structural connectome data from healthy individuals and individuals with a diagnosis of temporal lobe epilepsy (TLE). The results are in the form of either time values, representing the time at which brain regions in the simulations 'escaped' into a seizure state, or corresponding node labels which represent the region that escaped at that time. Simulations were stopped after the first three nodes escaped, and then repeated over 100 iterations. There were 39 controls and 22 left TLE patients. Simulations were also carried out for altered structural connectomes simulating surgery influence on the time taken for nodes to escape. Clinical resection (clinres), subject-specific resections (subspecres) or random resections (ranres). 'Lmdas' shows the deviation from the control average of surface areas for each region in each subject, normalised to lie between 0 and 1. 'Names' is a cell array containing the node labels for the 82 regions.
DOI: 10.5281/zenodo.33641
title: Metagenomic Data For Bathymodiolus Symbionts Deposited In Img

description: Metagenomic data for the sulfur- and methane-oxidizing symbionts of <em>Bathymodiolus</em> mussels deposited in the Integrated Microbial Genomes (IMG) database of the DOE Joint Genome Institute (http://img.jgi.doe.gov/)
DOI: 10.5281/zenodo.33642
title: Cultivation Of Host-Associated Bacteria Under Sulfide-Enriched Microoxic And Anoxic Conditions

description: Cultivation protocol
DOI: 10.5281/zenodo.33699
title: Concentrations Of Dissolved Gases At A Methane Seep In The Deep Northern Gulf Of Mexico Measured With An In Situ Mass Spectrometer (Isms)

description: Concentrations of dissolved methane, hydrogen sulfide, carbon dioxide and oxygen in a <em>Bathymodiolus</em> mussel bed at a methane seep in the deep northern Gulf of Mexico. The data were collected with an in situ mass spectrometer (ISMS) on May 6, 2015, during a research cruise with RV Nautilus, dive H1423. The location was site MC853, at 28.12835 (lat), -89.14100 (long), in 1080 m water depth. At this site the two mussel species <em>Bathymodiolus brooksi</em> and <em>B. childressi</em> were collected. ISMS measurements were performed before and after the removal of animals from the mussel bed.
DOI: 10.5281/zenodo.12347
title: Results Of Preliminary Screening Tests For All Participants (Aci Experiment)

description: Participants' gender, ages, handedness. Results of Raven's test, Reading test, Memory span test, ANT test, and audiogram
DOI: 10.5281/zenodo.12457
title: Computer Use And Mathematics Achievement In Timss

description: This dataset contains country-level data on computer use and mathematics achievement of 8th grade students from TIMSS 2003, 2007 and 2011.
description: Use the data for statistical purposes only; other NCES data usage requirements are given in this file.
DOI: 10.5281/zenodo.33704
title: Protocols For Mass Spectrometry Imaging

description: Protocols for metabolomic profiling using GC-MS, semi-thin cryosectioning of tissues for MALDI-IMS, and the application of a matrix on semi-thin cryosections for MALDI-IMS.
DOI: 10.5281/zenodo.33781
title: Metop-B Level 1B File Granules, Eps Format

description: Two short Metop-B scenes from the 2014-12-02, covering Western Canada+Groenland and Antarctica+South Africa.<br>
DOI: 10.5281/zenodo.12453
title: Dicosyn Raw Dataset

description: This dataset has originally been created as explained there: 

http://naviprox.net/tmuse/resources

I'm not the original creator of the dataset. I share here only the topology of the network of the synonymy network, without the correspondance to original words, because I'm not the owner of the original dataset. For more information, please contact me

Rémy Cazabet
DOI: 10.5281/zenodo.12500
title: Reproducibility And Robustness Of Graph Measures Of The Associative-Semantic Network

description: Matfiles and matlab scripts used to study the reproducibility and robustness of graph measures of the Associative-Semantic Network.
DOI: 10.5281/zenodo.12522
title: Appetite For Self-Destruction: Suicidal Biting As A Nest Defense Strategy In Trigona Stingless Bees

description: Data 1 is an excel spreadsheet containing data needed to analyse<br>
"attack duration", as this is measured at the level of the individual bee.

Data 2 is an excel spreadsheet containing data needed to analyse<br>
"probability of attack", "latency" (time until attack) and "number of bees",<br>
as these variables are analysed at the level of each flag wave on a colony.

Data3 is an excel spreadsheet containing data for the "suicide" bioassay.<br>
A 1 in the self.sacrifice column indicates a dead bee, a 0 indicates a surviving one.
DOI: 10.5281/zenodo.12593
title: Minimal-Size Perfectly Blank Pdf Page

description: I will get a DOI from this release through Zenodo, which I can cite in our paper. Cool!
DOI: 10.5281/zenodo.12598
title: Uubf Library Data

description: Materials in UUBF Library
DOI: 10.5281/zenodo.12626
title: Cpgoe_Package

description: Set of scripts and datasets used to analyze gene expression in terms of normalized CpG content.
DOI: 10.5281/zenodo.12632
title: 1000 Backlinks To Twitter.Com (06-Nov-2014) -- Varocarbas.Com

description: High quality backlinks to twitter.com. The retrieval process was completed on 06-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.12633
title: 1000 Backlinks To Facebook.Com (08-Nov-2014) -- Varocarbas.Com

description: High quality backlinks to facebook.com. The retrieval process was completed on 08-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.12635
title: Supporting Data For: A Linear Response, Dft+U Study Of Trends In The Oxygen Evolution Activity Of Transition Metal Rutile Dioxides

description: This directory contains all of the finished calculations required for fully analysis of the paper "A linear response, DFT+U study of trends in the oxygen evolution activity of transition metal rutile dioxides" by Zhongnan Xu, Jan Rossmeisl, and John R Kitchin. To use this repository, download the supporting information file and run the scripts present in either 'supporting-information.pdf' or 'supporting-information.org'.

The is the release of the supporting data before the first submission to the first journal.
DOI: 10.5281/zenodo.17667
title: Libs-Github-Api: Initial Release

description: Data on the programming languages used in libraries (as in the institution, not as in reusable code libraries) which uses the "Libraries Sharing Code" page of the Code4Lib wiki as a source: http://wiki.code4lib.org/Libraries_Sharing_Code
DOI: 10.5281/zenodo.17701
title: Data Used For Ecal 2015 Paper "Optimal Mutation Rate Control Under Selection In Hamming Spaces"

description: This dataset contains the evolved mutation rate control functions, obtained by following the methods described in the following paper, from which the means and standard deviations shown in the paper were calculated.

Paper: Optimal Mutation Rate Control under Selection in Hamming Spaces, accepted for publication in Advances in Artificial Life, ECAL 2015: Proceedings of the Thirteenth European Conference on the Synthesis and Simulation of Living Systems.
DOI: 10.5281/zenodo.33847
title: Crack Nucleation Using Combined Crystal Plasticity Modelling, Hr-Dic And Hr-Ebsd In A Superalloy Containing Non-Metallic Inclusions Under Fatigue

description: The uploaded data are required to reproduce the experimental results in the paper. 

To replicate figure 4, both GID.mat and thermal_E11.mat should be loaded into matlab. 

To replicate figure 6, strain_11.mat should be uploaded. Then fDIC_GB.m should be executed. 

If the reader has further questions, please contact Tiantian Zhang at tiantian.zhang08@imperial.ac.uk or tzhang6@wpi.edu
DOI: 10.5281/zenodo.33878
title: Dataset From: "Trans-Saccadic Integration Of Peripheral And Foveal Feature Information Is Close To Optimal" (Journal Of Vision)

description: Dataset from the following publication:

Wolf, C. & Schütz, A.C. (2015). Trans-saccadic integration of peripheral and foveal feature information is close to optimal. <em>Journal of Vision</em>, <em>15</em>(16):1. doi: 10.1167/15.16.1 .

 

Each folder contains the data belonging to the corresponding experiment in the publication. Data sheets are csv files.

Each data folder contains a description of the columns. Every row corresponds to one trial. If a value is missing or not applicable for a given trial, it is labelled as NaN ("not a number").

<br>
For experiment 1 and 2, the data also include trials which were not considered for final analysis due to too early or too late saccade onsets.<br>
Removed trials can be identified by an additional column (see data description). In experiment 2, participant 41 was excluded from the overall analysis, because this participant was not susceptible to the contrast manipulation.

For experiment 3, all trials listed in the data sheet were included in the analysis.

 

For further questions, please contact:<br>
chr.wolf[at]uni-marburg.de or a.schuetz[at]uni.marburg.de

<br>
-- Nov 17th 2015 --
DOI: 10.5281/zenodo.12727
title: Naive B Cells, Antibody Secreting Cells, Plasma Cells

description: Raw Illumina MiSeq data in zipped FASTQ format. The data set includes demultiplexed samples from naive B cells (_20433_), antibody secreting cells (_20434_) and plasma cells (_20435_) obtained from the same Balb/c mouse via sorting. Every sample consists of forward (_R1_), reverse (_R2_)  reads (2x250 bp).
DOI: 10.5281/zenodo.12743
title: Dppc @ 323K, New Ff By Tjörnhammar & Edholm

description: Trajectory of 144 DPPC molecules @ 323K. Force field and initial structure from http://pubs.acs.org/doi/full/10.1021/ct500589z
DOI: 10.5281/zenodo.12800
title: Stellar Model Isochrone Data

description: Stellar model isochrone data that is downloaded and used by the 'isochrones' python module.  Data come from the Dartmouth, Padova, and BASTI stellar model grids.<br>
DOI: 10.5281/zenodo.17754
title: Data Set Of Ca1 Pyramidal Cell Models Using An Intact Whole Hippocampus Preparationv2

description: The frequency-current (f-I) profiles and an example of rebound firing of pyramidal cells are presented. Four .abf files contain the f-I curve data for the respective cell (as labelled PYR1, PYR2, PYR3 and PYR4 for Pyramidal cell 1, Pyramidal cell 2, Pyramidal cell 3 and Pyramidal cell 4).  That is, they contain the cell's response to the application of a series of depolarizing current steps of 1 s duration while the cells are held in current clamp, as well as the current clamp data itself.  Each recording is 2 s total.  Amplitudes of the input were increased incrementally with step sizes of 10 pA for PYR1, PYR3, and PYR4, and a step size of 25 pA for PYR 2.  PYR1 first spikes on the 5th of 30 steps with 38.7 pA of depolarizing input.  PYR2 first spikes on the 3rd of 13 steps with 1.2 pA of input.  PYR3 first spikes on the 7th of 34 steps with 62.0 pA of input, and PYR4 first spikes on the 7th of 30 steps with 12.1 pA of input.  In the .abf file labelled PYR5_rebound, an example of rebound firing of a pyramidal cell following hyperpolarizing input is given.  While the cell was held at -52 mV in current clamp, as series of 1 s hyperpolarizing steps (10 steps, 25 pA increments) were used to record the post- hyperpolarization rebound spiking.  For the figure showing this rebound spiking (Figure 1), the first two hyperpolarizing steps and the respective firing are shown.  For visualization purposes, the spike artifact in the current clamp input trace was removed and replaced with the mean current in the Figure.
DOI: 10.5281/zenodo.17788
title: Output From Carbon Forest Edge Effect Analysis: Edge Effect Distance And Magnitude

description: Carbon edge effect distance and magnitude results for edge effects on forest carbon stocks across the tropics. In grid cells where the majority of pixels were from forest biomes, we consider three candidate regression models to represent the relationship between biomass density and distance to forest edge.  In particular, we consider:

method 1: Biomass= θ_1-θ_2⋅exp(-θ_3⋅Distance)

method 2: Biomass= β_0+β_1⋅ln(Distance)

method 3: Biomass = \eta_0+\eta_1 * Distance

Then, for each grid cell, the candidate with the highest $R^2$ is used to best represent the relationship between density and distance to forest edge.  Models (2) and (3) were deemed as suitable (and more simplistic) alternatives in cells where higher distances were generally not observed and as a result the forest core was not firmly established. We also note that in the vast majority of grid cells, model (1) was optimal. For each cell the magnitude and distance of the edge effect were again estimated.  In cells using models (2) or (3) the forest core () was estimated as the average biomass density at the largest observed distance in the cell.

regression_coefficients_as_shapefile -  projected spatially as an ESRI Shapefile where the methods are defined as:
DOI: 10.5281/zenodo.17790
title: Libs-Github-Api: Add Summary Stats

description: new lib/summary-stats.js script compiles a sorted CSV of all languages used with data on the number of repos the language appears in, the number for which it is recorded as the primary language, and the total lines of code in the language across all repos.
DOI: 10.5281/zenodo.17794
title: Data Set Of Ca1 Pyramidal Cell Recordings Using An Intact Whole Hippocampus Preparation, Including Recordings Of Rebound Firing (V2)

description: The frequency-current (f-I) profiles and an example of rebound firing of pyramidal cells are presented. Four .abf files contain the f-I curve data for the respective cell (as labelled PYR1, PYR2, PYR3 and PYR4 for Pyramidal cell 1, Pyramidal cell 2, Pyramidal cell 3 and Pyramidal cell 4).  That is, they contain the cell's response to the application of a series of depolarizing current steps of 1 s duration while the cells are held in current clamp, as well as the current clamp data itself.  Each recording is 2 s total.  Amplitudes of the input were increased incrementally with step sizes of 10 pA for PYR1, PYR3, and PYR4, and a step size of 25 pA for PYR 2.  PYR1 first spikes on the 5th of 30 steps with 38.7 pA of depolarizing input.  PYR2 first spikes on the 3rd of 13 steps with 1.2 pA of input.  PYR3 first spikes on the 7th of 34 steps with 62.0 pA of input, and PYR4 first spikes on the 7th of 30 steps with 12.1 pA of input.  In the .abf file labelled PYR5_rebound, an example of rebound firing of a pyramidal cell following hyperpolarizing input is given.  While the cell was held at -52 mV in current clamp, as series of 1 s hyperpolarizing steps (10 steps, 25 pA increments) were used to record the post- hyperpolarization rebound spiking.  For the figure showing this rebound spiking (Figure 1), the first two hyperpolarizing steps and the respective firing are shown.  For visualization purposes, the spike artifact in the current clamp input trace was removed and replaced with the mean current in the Figure.
DOI: 10.5281/zenodo.33934
title: Austrian Science Fund (Fwf) Funding Statistics 2009-2014

description: Compilation of funding statistics from FWF's annual reports as longitudinal data from 2009-2014.
DOI: 10.5281/zenodo.33959
title: Data File For Paper "The Intriguing Poison Tolerance Of Non-Precious Metal Oxygen Reduction Reaction (Orr) Catalysts"  Doi: 10.1039/C5Ta05794A

description: Data file containing data for figures and supplemental information for the paper

The intriguing poison tolerance of non-precious metal oxygen reduction reaction (ORR) catalysts

D. Malko, T. Lopes, E. Symianakis  and A. R. Kucernak

published in Journal of Materials Chemistry A, 2015

DOI: 10.1039/C5TA05794A
DOI: 10.5281/zenodo.12845
title: 1000 Backlinks To Instagram.Com (21-Nov-2014) -- Varocarbas.Com

description: High quality backlinks to instagram.com. The retrieval process was completed on 21-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.12846
title: 1000 Backlinks To Youtube.Com (21-Nov-2014) -- Varocarbas.Com

description: High quality backlinks to youtube.com. The retrieval process was completed on 21-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.12847
title: 1000 Backlinks To Wordpress.Org (22-Nov-2014) -- Varocarbas.Com

description: High quality backlinks to wordpress.org. The retrieval process was completed on 22-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.12848
title: 1000 Backlinks To Pinterest.Com (22-Nov-2014) -- Varocarbas.Com

description: High quality backlinks to pinterest.com. The retrieval process was completed on 22-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.12849
title: 1000 Backlinks To Twitter.Com (06-Nov-2014) -- 24-Nov Update  -- Varocarbas.Com

description: High quality backlinks to twitter.com. The retrieval process was completed on 06-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.17912
title: Libs-Github-Api: Fix "Lines" Mistake — Github Api Reports Bytes, Not Lines

description: Correct mistake in several places, including data file and scripts.
DOI: 10.5281/zenodo.12850
title: 1000 Backlinks To Facebook.Com (08-Nov-2014) -- 24-Nov Update  -- Varocarbas.Com

description: High quality backlinks to facebook.com. The retrieval process was completed on 08-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.12913
title: Indoor Positioning Database

description: Database containing measurements from wireless networks.
description: Wi-Fi measurements for Indoor Positioning Systems
DOI: 10.5281/zenodo.12937
title: Arctic Protistan N-Related Protein Sequences

description: Nitrogen metabolism related protein sequences in fasta format, originating from Arctic Ocean microbial eukaryotes. Sequences were produced from transcriptomes, sequenced by DoE-Joint Genome Institute (JGI) and the Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP; Gordon and Betty Moore Foundation).
DOI: 10.5281/zenodo.12975
title: Gbif: Us Bird Locations For Sightings In  2013

description: A tab delimited file containing the coordinates rounded to 1 decimal place for U.S. bird observations for each day of 2013.  Dataset holds data available through GBIF.org on 29th December 2014. 

Data schema: day,month,year,latitude,longitude,numberOfRecords
DOI: 10.5281/zenodo.12988
title: 1000 Backlinks To Blogspot.Com (25-Nov-2014) -- Varocarbas.Com

description: High quality backlinks to pinterest.com. The retrieval process was completed on 25-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.12989
title: 1000 Backlinks To Tumblr.Com (25-Nov-2014) -- Varocarbas.Com

description: High quality backlinks to tumblr.com. The retrieval process was completed on 25-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.12990
title: 1000 Backlinks To Feedburner.Com (26-Nov-2014) -- Varocarbas.Com

description: High quality backlinks to feedburner.com. The retrieval process was completed on 26-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.12991
title: 1000 Backlinks To Linkedin.Com (26-Nov-2014) -- Varocarbas.Com

description: High quality backlinks to linkedin.com. The retrieval process was completed on 26-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.12992
title: 1000 Backlinks To Flickr.Com (28-Nov-2014) -- Varocarbas.Com

description: High quality backlinks to flickr.com. The retrieval process was completed on 28-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.
DOI: 10.5281/zenodo.12993
title: 1000 Backlinks To Google.Com (28-Nov-2014) -- Varocarbas.Com

description: High quality backlinks to google.com. The retrieval process was completed on 28-Nov-2014.

 

Note that the bots in varocarbas.com (Project 1 - Stage 2) are collecting a maximum of 1000 high-quality backlinks (e.g., "site.com/backlink" rather than "site.com/this/that/backlink") for each domain.