cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5643679
title: Additional file 9: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: Candidates of PAI-like region overlapping genomic islands (cPAIs) impacted recombination events identified in Salmonella enterica subsp. enterica serovars Dublin, Enteritidis, Pullorum and Gallinarum. The variants were identified by the workflow ‘VARCall’ against the reference genome S. Enteritidis (strain P125109, accession NC_011294.1). The produced pseudogenomes (4,685,848 bp) were inferred with RAxML based on a bootstrap analysis and search for best-scoring Maximum Likelihood tree with General Time-Reversible model of substitution and the secondary structure 16-state model. The pseudogenomes and the RAxML inference were used to perform detection of recombination events based on default gamma priors of ClonalFrameML. The recombination events with sizes higher than 400 bp are presented. Pathogenicity Island Database from KonKuk University (Seoul, South Korea) were used to detect Salmonella Pathogenic Islands (SPIs) SPI-1 (2890501–2,934,879), SPI-2 (1727425–1,769,273), SPI-4 (4333507–4,361,514), SPI-5 (1053174–1,074,167), SPI-6 (299796–330,890), SPI-11 (1904313–1,912,607), SPI-12 (2328077–2,347,757) and PAI III 536 (2801306–2,810,695) of the reference genome S. Enteritidis (strain P125109, accession NC_011294.1). (XLSX 19 kb)
DOI: 10.6084/m9.figshare.5643679.v1
title: Additional file 9: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: Candidates of PAI-like region overlapping genomic islands (cPAIs) impacted recombination events identified in Salmonella enterica subsp. enterica serovars Dublin, Enteritidis, Pullorum and Gallinarum. The variants were identified by the workflow ‘VARCall’ against the reference genome S. Enteritidis (strain P125109, accession NC_011294.1). The produced pseudogenomes (4,685,848 bp) were inferred with RAxML based on a bootstrap analysis and search for best-scoring Maximum Likelihood tree with General Time-Reversible model of substitution and the secondary structure 16-state model. The pseudogenomes and the RAxML inference were used to perform detection of recombination events based on default gamma priors of ClonalFrameML. The recombination events with sizes higher than 400 bp are presented. Pathogenicity Island Database from KonKuk University (Seoul, South Korea) were used to detect Salmonella Pathogenic Islands (SPIs) SPI-1 (2890501–2,934,879), SPI-2 (1727425–1,769,273), SPI-4 (4333507–4,361,514), SPI-5 (1053174–1,074,167), SPI-6 (299796–330,890), SPI-11 (1904313–1,912,607), SPI-12 (2328077–2,347,757) and PAI III 536 (2801306–2,810,695) of the reference genome S. Enteritidis (strain P125109, accession NC_011294.1). (XLSX 19 kb)
DOI: 10.6084/m9.figshare.5643655
title: Additional file 8: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: Candidates of PAI-like region overlapping genomic islands (cPAIs) impacted by intragenic and non-homoplastic variants (SNPs and InDels) fixed in Salmonella enterica subsp. enterica serovars Dublin versus all the others genomes (Ontology 1 called ‘Dub_All’), Pullorum/Gallinarum versus Enteritidis (Ontology 2 called ‘Ent_Pull/Gall’), Pullorum versus Gallinarum (Ontology 3 called ‘Pull_Gall’), and Gallinarum versus Pullorum (Ontology 4 called ‘Gall_Pull’). Pathogenicity Island Database from KonKuk University (Seoul, South Korea) were used to detect Salmonella Pathogenic Islands (SPIs) SPI-1 (2890501–2,934,879), SPI-2 (1727425–1,769,273), SPI-4 (4333507–4,361,514), SPI-5 (1053174–1,074,167), SPI-6 (299796–330,890), SPI-11 (1904313–1,912,607), SPI-12 (2328077–2,347,757) and PAI III 536 (2801306–2,810,695) of the reference genome S. Enteritidis (strain P125109, accession NC_011294.1). (XLSX 251 kb)
DOI: 10.6084/m9.figshare.5643655.v1
title: Additional file 8: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: Candidates of PAI-like region overlapping genomic islands (cPAIs) impacted by intragenic and non-homoplastic variants (SNPs and InDels) fixed in Salmonella enterica subsp. enterica serovars Dublin versus all the others genomes (Ontology 1 called ‘Dub_All’), Pullorum/Gallinarum versus Enteritidis (Ontology 2 called ‘Ent_Pull/Gall’), Pullorum versus Gallinarum (Ontology 3 called ‘Pull_Gall’), and Gallinarum versus Pullorum (Ontology 4 called ‘Gall_Pull’). Pathogenicity Island Database from KonKuk University (Seoul, South Korea) were used to detect Salmonella Pathogenic Islands (SPIs) SPI-1 (2890501–2,934,879), SPI-2 (1727425–1,769,273), SPI-4 (4333507–4,361,514), SPI-5 (1053174–1,074,167), SPI-6 (299796–330,890), SPI-11 (1904313–1,912,607), SPI-12 (2328077–2,347,757) and PAI III 536 (2801306–2,810,695) of the reference genome S. Enteritidis (strain P125109, accession NC_011294.1). (XLSX 251 kb)
DOI: 10.6084/m9.figshare.5643637
title: Additional file 7: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: Gene-ontology (GO) terms of intragenic and non-homoplastic variants (SNPs and InDels) fixed in Salmonella enterica subsp. enterica serovars Dublin versus all the others genomes (Ontology 1 called ‘Dub_All’), Pullorum/Gallinarum versus Enteritidis (Ontology 2 called ‘Ent_Pull/Gall’), Pullorum versus Gallinarum (Ontology 3 called ‘Pull_Gall’), and Gallinarum versus Pullorum (Ontology 4 called ‘Gall_Pull’). The variant annotation was performed with SnpEff against reference genome S. Enteritidis (strain P125109, accession NC_011294.1). The identification of variants, detection of fixed variants, assignment of GO-terms to variants, and gene-ontology enrichment analysis were performed with the scripts ‘VARCall’, ‘phyloFixedVar’, ‘GetGOxML’, and ‘EveryGO’, respectively. The level, biological process (BP), molecular function (MF), and cellular component (CC) of GO-terms are represented. The p-values of hypergeometric tests were adjusted by Bonferroni correction. (XLSX 327 kb)
DOI: 10.6084/m9.figshare.5643637.v1
title: Additional file 7: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: Gene-ontology (GO) terms of intragenic and non-homoplastic variants (SNPs and InDels) fixed in Salmonella enterica subsp. enterica serovars Dublin versus all the others genomes (Ontology 1 called ‘Dub_All’), Pullorum/Gallinarum versus Enteritidis (Ontology 2 called ‘Ent_Pull/Gall’), Pullorum versus Gallinarum (Ontology 3 called ‘Pull_Gall’), and Gallinarum versus Pullorum (Ontology 4 called ‘Gall_Pull’). The variant annotation was performed with SnpEff against reference genome S. Enteritidis (strain P125109, accession NC_011294.1). The identification of variants, detection of fixed variants, assignment of GO-terms to variants, and gene-ontology enrichment analysis were performed with the scripts ‘VARCall’, ‘phyloFixedVar’, ‘GetGOxML’, and ‘EveryGO’, respectively. The level, biological process (BP), molecular function (MF), and cellular component (CC) of GO-terms are represented. The p-values of hypergeometric tests were adjusted by Bonferroni correction. (XLSX 327 kb)
DOI: 10.6084/m9.figshare.5643622
title: Additional file 6: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: Phylogenetically relevant single nucleotide polymorphisms (SNPs) and small insertions/deletions (InDels) fixed at phylogenetic branches where genomes of Salmonella enterica subsp. enterica serovars Enteritidis (n = 33), Pullorum (n = 5), Gallinarum (n = 8) and Dublin (n = 13) diverged. The variant calling analysis was performed with the ‘VARCall’ workflow (i.e. 12,929 SNPs and 1157 small InDels). The fixed non-homoplastic variants are defined by common genotypes across the considered group of genomes, as well as different genotypes in all the others compared genomes. The fixed homoplastic variants are defined by common genotypes across the considered group of genomes and genomes of independent phylogenetic clades, as well as different genotypes in genomes of the compared child-leaves. The variants were annotated with SnpEff against reference genome S. Enteritidis (strain P125109, accession NC_011294.1). (XLSX 13 kb)
DOI: 10.6084/m9.figshare.5643622.v1
title: Additional file 6: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: Phylogenetically relevant single nucleotide polymorphisms (SNPs) and small insertions/deletions (InDels) fixed at phylogenetic branches where genomes of Salmonella enterica subsp. enterica serovars Enteritidis (n = 33), Pullorum (n = 5), Gallinarum (n = 8) and Dublin (n = 13) diverged. The variant calling analysis was performed with the ‘VARCall’ workflow (i.e. 12,929 SNPs and 1157 small InDels). The fixed non-homoplastic variants are defined by common genotypes across the considered group of genomes, as well as different genotypes in all the others compared genomes. The fixed homoplastic variants are defined by common genotypes across the considered group of genomes and genomes of independent phylogenetic clades, as well as different genotypes in genomes of the compared child-leaves. The variants were annotated with SnpEff against reference genome S. Enteritidis (strain P125109, accession NC_011294.1). (XLSX 13 kb)
DOI: 10.6084/m9.figshare.5643610
title: Additional file 8: Table S7. of A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

description: Gene annotations of all 199 IBD-specific genes. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.5643610.v1
title: Additional file 8: Table S7. of A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

description: Gene annotations of all 199 IBD-specific genes. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.5643607
title: Additional file 5: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: List of recombination events identified in Salmonella enterica subsp. enterica serovars Dublin, Enteritidis, Pullorum and Gallinarum. The variants were identified by the ‘VARCall’ workflow against the reference genome S. Enteritidis (strain P125109, accession NC_011294.1). The produced pseudogenomes (4,685,848 bp) were inferred with RAxML based on a bootstrap analysis and search for best-scoring Maximum Likelihood tree with General Time-Reversible model of substitution and the secondary structure 16-state model. The pseudogenomes and the RAxML inference were used to perform detection of recombination events based on default gamma priors of ClonalFrameML. The recombination events with sizes higher than 400 bp are presented. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.5643607.v1
title: Additional file 5: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: List of recombination events identified in Salmonella enterica subsp. enterica serovars Dublin, Enteritidis, Pullorum and Gallinarum. The variants were identified by the ‘VARCall’ workflow against the reference genome S. Enteritidis (strain P125109, accession NC_011294.1). The produced pseudogenomes (4,685,848 bp) were inferred with RAxML based on a bootstrap analysis and search for best-scoring Maximum Likelihood tree with General Time-Reversible model of substitution and the secondary structure 16-state model. The pseudogenomes and the RAxML inference were used to perform detection of recombination events based on default gamma priors of ClonalFrameML. The recombination events with sizes higher than 400 bp are presented. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.5643589
title: Additional file 7: Table S6. of A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

description: Gene annotations for the selected R. gnavus IBD-specific genes mentioned in the main text. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.5643589.v1
title: Additional file 7: Table S6. of A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

description: Gene annotations for the selected R. gnavus IBD-specific genes mentioned in the main text. (XLSX 9 kb)
DOI: 10.25592/uhhfdm.1476
title: Rehbein-ENDFAS/Rehbein-SKOBI-Korpus

description: Audio recordings of evocative field experiments (picture story, retelling, spontaneous discourse etc.) with Turkish/German bilingual children and monolingual Turkish / monolingual German children as control data. ENDFAS and SKOBI are two corpora of Turkish-German bilingual children, created for the research projects ENDFAS ("Die Entwicklung narrativer Diskursfähigkeiten im Deutschen und Türkischen in Familie und Schule") and SKOBI ("Sprachliche Konnektivität bei bilingual türkisch-deutsch aufwachsenden Kindern und Jugendlichen") at the University of Hamburg. The corpus creators are Jochen Rehbein, Annette Herkenrath and Birsel Karakoç. Post-editing and publication of the data was done by project Z2 at the Research Center on Multilingualism, University of Hamburg. Herkenrath, Annette, and Jochen Rehbein. 2012. "Pragmatic Corpus Analysis, Exemplified by Turkish-German Bilingual and Monolingual Data." In Multilingual Corpora and Multilingual Corpus Analysis, edited by Thomas Schmidt and Kai Wörner, pp. 123–52. Hamburg Studies in Multilingualism, 14. John Benjamins. <strong>CLARIN Metadata summary for Rehbein-ENDFAS/Rehbein-SKOBI-Korpus (CMDI-based)</strong> <strong>Title: </strong>Rehbein-ENDFAS/Rehbein-SKOBI-Korpus<br> <strong>Description: </strong>Audio recordings of evocative field experiments (picture story, retelling, spontaneous discourse etc.) with Turkish/German bilingual children and monolingual Turkish / monolingual German children as control data.<br> <strong>Publication date: </strong>2009-03-04<br> <strong>Data owner: </strong> Jochen Rehbein, Institut für Germanistik I / Von Melle Park 6 / D-20146 Hamburg, rehbein@uni-hamburg.de<br> <strong>Contributors: </strong> Jochen Rehbein, Institut für Germanistik I / Von Melle Park 6 / D-20146 Hamburg, rehbein@uni-hamburg.de (compiler)<br> <strong>Project: </strong> E5 "Linguistic connectivity in bilingual Turkish-German children", German Research Foundation (DFG)<br> <strong>Keywords: </strong> child language acquisition, child bilingualism, monolingual data, L1 data, L2 data, contact variety, EXMARaLDA<br> <strong>Languages: </strong> German (deu), Turkish (tur)<br> <strong>Size: </strong> 523 speakers (284 female, 200 male, 36 unknown), 1017 communications, 371 recordings, 14033 minutes, 836 transcriptions, 748074 words<br> <strong>Temporal Coverage: </strong> 1987-10-10/2009-09-19<br> <strong>Spatial Coverage: </strong> Bozyazı, TR; Anamur, TR; Istanbul, TR; Hamburg, DE; Ankara, TR; TR; Mersin, TR; istanbul, TR; Hamburg, TR; Anakara, TR; Icel, Bozyazi, TR; Icel, Anamur, TR; Icel, Anamar, TR; Icel (Anamur), TR; Icel, (Anamur), TR; Icel, (Bozyazi), TR; Icel (Bozyazi), TR; Eskisehir, TR; Tokat, TR; Izmir, TR; Istan, TR; Istanbul, TR<br> <strong>Genre: </strong> discourse<br> <strong>Modality: </strong> spoken
DOI: 10.25592/uhhfdm.1475
title: Rehbein-ENDFAS/Rehbein-SKOBI-Korpus

description: Audio recordings of evocative field experiments (picture story, retelling, spontaneous discourse etc.) with Turkish/German bilingual children and monolingual Turkish / monolingual German children as control data. ENDFAS and SKOBI are two corpora of Turkish-German bilingual children, created for the research projects ENDFAS ("Die Entwicklung narrativer Diskursfähigkeiten im Deutschen und Türkischen in Familie und Schule") and SKOBI ("Sprachliche Konnektivität bei bilingual türkisch-deutsch aufwachsenden Kindern und Jugendlichen") at the University of Hamburg. The corpus creators are Jochen Rehbein, Annette Herkenrath and Birsel Karakoç. Post-editing and publication of the data was done by project Z2 at the Research Center on Multilingualism, University of Hamburg. Herkenrath, Annette, and Jochen Rehbein. 2012. "Pragmatic Corpus Analysis, Exemplified by Turkish-German Bilingual and Monolingual Data." In Multilingual Corpora and Multilingual Corpus Analysis, edited by Thomas Schmidt and Kai Wörner, pp. 123–52. Hamburg Studies in Multilingualism, 14. John Benjamins. <strong>CLARIN Metadata summary for Rehbein-ENDFAS/Rehbein-SKOBI-Korpus (CMDI-based)</strong> <strong>Title: </strong>Rehbein-ENDFAS/Rehbein-SKOBI-Korpus<br> <strong>Description: </strong>Audio recordings of evocative field experiments (picture story, retelling, spontaneous discourse etc.) with Turkish/German bilingual children and monolingual Turkish / monolingual German children as control data.<br> <strong>Publication date: </strong>2009-03-04<br> <strong>Data owner: </strong> Jochen Rehbein, Institut für Germanistik I / Von Melle Park 6 / D-20146 Hamburg, rehbein@uni-hamburg.de<br> <strong>Contributors: </strong> Jochen Rehbein, Institut für Germanistik I / Von Melle Park 6 / D-20146 Hamburg, rehbein@uni-hamburg.de (compiler)<br> <strong>Project: </strong> E5 "Linguistic connectivity in bilingual Turkish-German children", German Research Foundation (DFG)<br> <strong>Keywords: </strong> child language acquisition, child bilingualism, monolingual data, L1 data, L2 data, contact variety, EXMARaLDA<br> <strong>Languages: </strong> German (deu), Turkish (tur)<br> <strong>Size: </strong> 523 speakers (284 female, 200 male, 36 unknown), 1017 communications, 371 recordings, 14033 minutes, 836 transcriptions, 748074 words<br> <strong>Temporal Coverage: </strong> 1987-10-10/2009-09-19<br> <strong>Spatial Coverage: </strong> Bozyazı, TR; Anamur, TR; Istanbul, TR; Hamburg, DE; Ankara, TR; TR; Mersin, TR; istanbul, TR; Hamburg, TR; Anakara, TR; Icel, Bozyazi, TR; Icel, Anamur, TR; Icel, Anamar, TR; Icel (Anamur), TR; Icel, (Anamur), TR; Icel, (Bozyazi), TR; Icel (Bozyazi), TR; Eskisehir, TR; Tokat, TR; Izmir, TR; Istan, TR; Istanbul, TR<br> <strong>Genre: </strong> discourse<br> <strong>Modality: </strong> spoken
DOI: 10.6084/m9.figshare.5643559
title: Additional file 2: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: Statistical report of the â VARCallâ workflow. The serovars Salmonella enterica subsp. enterica serovars Dublin, Enteritidis, Pullorum and Gallinarum were described by Langridge et al. (Proc. Natl. Acad. Sci. 2015;112:863â 8). (XLSX 16 kb)
DOI: 10.6084/m9.figshare.5643559.v1
title: Additional file 2: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: Statistical report of the â VARCallâ workflow. The serovars Salmonella enterica subsp. enterica serovars Dublin, Enteritidis, Pullorum and Gallinarum were described by Langridge et al. (Proc. Natl. Acad. Sci. 2015;112:863â 8). (XLSX 16 kb)
DOI: 10.6084/m9.figshare.5643553
title: Additional file 5: Table S5. of A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

description: Isolation sources for all currently available R. gnavus genomes. Isolate genomes sequenced and assembled in this manuscript are indicated with an asterisk. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.5643553.v1
title: Additional file 5: Table S5. of A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

description: Isolation sources for all currently available R. gnavus genomes. Isolate genomes sequenced and assembled in this manuscript are indicated with an asterisk. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.5643541
title: Additional file 1: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: Genome dataset used in the present study. The genomes of Salmonella enterica subsp. enterica serovars Enteritidis, Pullorum, Gallinarum and Dublin were described by Langridge et al. (Proc. Natl. Acad. Sci. 2015;112:863â 8). (XLSX 15 kb)
DOI: 10.6084/m9.figshare.5643541.v1
title: Additional file 1: of First gene-ontology enrichment analysis based on bacterial coregenome variants: insights into adaptations of Salmonella serovars to mammalian- and avian-hosts

description: Genome dataset used in the present study. The genomes of Salmonella enterica subsp. enterica serovars Enteritidis, Pullorum, Gallinarum and Dublin were described by Langridge et al. (Proc. Natl. Acad. Sci. 2015;112:863â 8). (XLSX 15 kb)
DOI: 10.6084/m9.figshare.5643523
title: Additional file 4: Table S4. of A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

description: Differentially abundant species during R. gnavus blooms. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.5643523.v1
title: Additional file 4: Table S4. of A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

description: Differentially abundant species during R. gnavus blooms. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.5643517
title: Additional file 6: of RNA sequencing reveals candidate genes and polymorphisms related to sperm DNA integrity in testis tissue from boars

description: The edgeR source code used for testing for differential expression. (TXT 2 kb)
DOI: 10.6084/m9.figshare.5643517.v1
title: Additional file 6: of RNA sequencing reveals candidate genes and polymorphisms related to sperm DNA integrity in testis tissue from boars

description: The edgeR source code used for testing for differential expression. (TXT 2 kb)
DOI: 10.6084/m9.figshare.5643502
title: Additional file 3. Table S3. of A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

description: Differentially abundant species in IBD. Differentially abundant species in IBD patients compared to controls that are significant in both the LSS and Lewis et al. cohorts (qâ
DOI: 10.6084/m9.figshare.5643502.v1
title: Additional file 3. Table S3. of A novel Ruminococcus gnavus clade enriched in inflammatory bowel disease patients

description: Differentially abundant species in IBD. Differentially abundant species in IBD patients compared to controls that are significant in both the LSS and Lewis et al. cohorts (qâ
DOI: 10.6084/m9.figshare.5643496
title: Additional file 1: of Using a monitoring and evaluation framework to improve study efficiency and quality during a prospective cohort study in infants receiving rotavirus vaccination in El Alto, Bolivia: the Infant Nutrition, Inflammation, and Diarrheal Illness (NIDI) study

description: NIDI_Study_Questionnaire_Visit_1.pdf. NIDI Study Questionnaire - visit one. NIDI study questionnaire for visit one â baseline data collection. Includes informed consent. Note: the questionnaire was developed in Spanish and is presented here in Spanish (SAS 7 kb)
DOI: 10.6084/m9.figshare.5643496.v1
title: Additional file 1: of Using a monitoring and evaluation framework to improve study efficiency and quality during a prospective cohort study in infants receiving rotavirus vaccination in El Alto, Bolivia: the Infant Nutrition, Inflammation, and Diarrheal Illness (NIDI) study

description: NIDI_Study_Questionnaire_Visit_1.pdf. NIDI Study Questionnaire - visit one. NIDI study questionnaire for visit one â baseline data collection. Includes informed consent. Note: the questionnaire was developed in Spanish and is presented here in Spanish (SAS 7 kb)