cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ztrqb5
title: Occurrence Download

description: A dataset containing 387 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Panicum hemitomon Schult.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 387 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040924-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s2ajtw
title: Occurrence Download

description: A dataset containing 155 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium koehleri (Zahn) Dahlst."
 ]
}

 The dataset includes 155 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0244855-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fmr4av
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Isotropis canescens F.Muell."
 ]
}

 The dataset includes 18 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0255720-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cssegn
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hypochaeris gayana (DC.) Cabrera"
 ]
}

 The dataset includes 110 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0251138-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cgz9pz
title: Occurrence Download

description: A dataset containing 5891 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Panicum repens L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5891 records from 258 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040926-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bpw9ry
title: Occurrence Download

description: A dataset containing 296208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Papaver rhoeas L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 296208 records from 2178 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040934-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u3vhhh
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "Geometry POLYGON((-180 -90,77.067 -90,77.067 10.167,-180 10.167,-180 -90))",
 "TaxonKey is Vateria indica L."
 ]
}

 The dataset's 1 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0178804-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.siubmd
title: Occurrence Download

description: A dataset containing 1675056 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is China",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 1675056 records from 168 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019530-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p4yda8
title: Occurrence Download

description: A dataset containing 162078 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Quiscalus mexicanus (Gmelin, 1788)"
 ]
}

 The dataset includes 162078 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0203749-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q3msva
title: Occurrence Download

description: A dataset containing 1814030 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Primulaceae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1814030 records from 1504 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019530-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jrkfmj
title: Occurrence Download

description: A dataset containing 563730 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coraciiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((150 -30,180 -30,180 0,150 0,150 -30))"
 ]
}

 The dataset includes 563730 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061028-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xfv2mm
title: Occurrence Download

description: A dataset containing 377 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Agrilus planipennis Fairmaire, 1888"
 ]
}

 The dataset includes 377 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028579-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.83y9yf
title: Occurrence Download

description: A dataset containing 9380 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cervus canadensis Erxleben, 1777"
 ]
}

 The dataset includes 9380 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174412-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yy653t
title: Occurrence Download

description: A dataset containing 181 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 "TaxonKey is Pyxicephalus adspersus Tschudi, 1838"
 ]
}

 The dataset includes 181 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006533-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mvpqmp
title: Occurrence Download

description: A dataset containing 200687 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is The reptiles and amphibians collection (RA) of the Muséum national d'Histoire Naturelle (MNHN - Paris)"
 ]
}

 The dataset includes 200687 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028579-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vgw3nh
title: Occurrence Download

description: A dataset containing 873 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Celastrus scandens L.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 873 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174483-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fw85zk
title: Occurrence Download

description: A dataset containing 584 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 "TaxonKey is Testudo hermanni boettgeri Mojsisovics, 1889"
 ]
}

 The dataset includes 584 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006540-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.oyc8fd
title: Occurrence Download

description: A dataset containing 16863896 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "Country is Australia",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 16863896 records from 269 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028580-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v2gmmr
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Venezuela (Bolivarian Republic of)",
 "Country is Trinidad and Tobago"
 ]
 },
 "TaxonKey is Rogersonanthus arboreus (Britton) Maguire & B.M.Boom"
 ]
}

 The dataset includes 72 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0186648-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sac9jm
title: Occurrence Download

description: A dataset containing 94 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Buenia massutii Kovacic, Ordines & Schliewen, 2017"
 ]
}

 The dataset includes 94 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006727-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2zu2s5
title: Occurrence Download

description: A dataset containing 6654 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Elates ransonnettii (Steindachner, 1876))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6654 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046918-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1dx0gy
title: Occurrence Download

description: A dataset containing 367 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Issue is Geodetic datum assumed WGS84",
 "Year 1989-2019",
 "TaxonKey is Cynopterus sphinx (Vahl, 1797)"
 ]
}

 The dataset includes 367 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028580-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mxszzg
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Protorhoe corollaria (Herrich-Schäffer, 1848)"
 ]
}

 The dataset includes 27 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0201750-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ssq7wf
title: Occurrence Download

description: A dataset containing 3730 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hemiprocne mystacea (R.Lesson & Garnot, 1827)"
 ]
}

 The dataset includes 3730 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007623-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zjzhbu
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hymenophyllum caparaoense Brade"
 ]
}

 The dataset includes 4 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028581-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nu2re7
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aquiloeurycea quetzalanensis (Parra-Olea, Canseco-Márquez & García-París, 2004)"
 ]
}

 The dataset includes 63 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007608-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26030/pppc-dn95
title: Temporal dynamics of the gut microbiota in people sharing a confined environment, a 520-day ground-based space simulation, MARS500

description: The MARS500 project, the longest ground-based space simulation ever, provided us with a unique opportunity to trace the crew microbiota over 520 days of isolated confinement, such as that faced by astronauts in real long-term interplanetary space flights, and after returning to regular life, for a total of 2 years.
DOI: 10.15468/dl.agqh3t
title: Occurrence Download

description: A dataset containing 76921 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arachis hypogaea L."
 ]
}

 The dataset includes 76921 records from 428 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002963-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ubq57
title: Occurrence Download

description: A dataset containing 4193 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Araucaria araucana (Molina) K.Koch"
 ]
}

 The dataset includes 4193 records from 217 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002967-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sst78k
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Avellanita bustillosii Phil."
 ]
}

 The dataset includes 51 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002970-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zwnz2q
title: Occurrence Download

description: A dataset containing 316 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-122.67343 35.5386,-120.48366 35.5386,-120.48366 37.32668,-122.67343 37.32668,-122.67343 35.5386))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Nasturtium officinale R.Br.",
 "Year 2008-2025"
 ]
}

 The dataset includes 316 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002971-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3emze5
title: Occurrence Download

description: A dataset containing 1207 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Python regius (Shaw, 1802)"
 ]
}

 The dataset includes 1207 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002973-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ehk4mq
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ameiva ameiva (Linnaeus, 1758)",
 "Year 1947-2005"
 ]
}

 The dataset includes 21 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002974-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2bpnhh
title: Occurrence Download

description: A dataset containing 35105850 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Mexico"
 ]
}

 The dataset includes 35105850 records from 3851 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002964-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qzxb5z
title: Occurrence Download

description: A dataset containing 603 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Strobocalyx esculenta)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 603 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004992-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvwnwg
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prunus serotina",
 "HasCoordinate is true",
 "Country is Portugal"
 ]
}

 The dataset includes 18 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004994-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17202667
title: Ontology pre-training improves machine learning-based predictions for metabolites - Supplementary Data

description: Supplementary data to our publication "Ontology pre-training improves machine learning-based predictions for metabolites"



python-chebai-opt-paper-v1: Python library used to conduct experiments

trained_models_and_data: Models and data as evaluated in our publication

scripts: extra scripts to reproduce experiments
DOI: 10.5281/zenodo.17312591
title: Ontology pre-training improves machine learning-based predictions for metabolites - Supplementary Data

description: Supplementary data to our publication "Ontology pre-training improves machine learning-based predictions for metabolites"



python-chebai-opt-paper-v1: Python library used to conduct experiments

trained_models_and_data: Models and data as evaluated in our publication

scripts: extra scripts to reproduce experiments
DOI: 10.15468/dl.bxbfns
title: Occurrence Download

description: A dataset containing 1502 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Cyanolyca nanus (Du Bus de Gisignies, 1847)"
 ]
}

 The dataset includes 1502 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002949-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tuf37q
title: Occurrence Download

description: A dataset containing 289 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio smithii DC.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 289 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081617-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.52y8sy
title: Occurrence Download

description: A dataset containing 281 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Diglossa major Cabanis, 1849"
 ]
}

 The dataset includes 281 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002957-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b37vwz
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astragalus andabaddensis Maassoumi, Bagheri & F.Ghahrem."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017499-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ecq242
title: Occurrence Download

description: A dataset containing 1071 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Laevicardium mortoni (Conrad, 1831)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 1071 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056795-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nbv43p
title: Occurrence Download

description: A dataset containing 118 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Pristimantis sanctaemartae (Ruthven, 1917)"
 ]
}

 The dataset includes 118 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017491-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.