cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1276160.v1
title: LTSTM data from Feb 2004 part 1

description: This is the first part of the low temperature STM data set from February 2004.
DOI: 10.6084/m9.figshare.15060141.v1
title: Supplementary Material for: Epidemiology of Epilepsy in Low- and Middle-Income Countries: Experience of a Standardized Questionnaire over the Past Two Decades

description: <b><i>Introduction:</i></b> Epilepsy affects &gt;50 million people worldwide, with 80% of them living in low- and middle-income countries (LMICs). Studies with a standardized methodology are required to obtain comparable data on epilepsy and implement health policies in order to reduce the treatment gap and improve the diagnosis and management of epilepsy. In 2000, following the guidelines of the International League Against Epilepsy (ILAE), the “questionnaire for investigation of epilepsy in tropical countries” (IENT questionnaire) was developed to promote epidemiological surveys on epilepsy using a standard methodology. This study aims to describe how, when, where, and why the IENT questionnaire has been used through epidemiological studies on epilepsy over the last 2 decades and to acquire users’ opinions about the tool. <b><i>Methods:</i></b> Studies that used the IENT questionnaire were searched through international and local bibliographic databases, including the gray literature. An online survey was carried out, including a snowball effect. Original research studies were included. Characteristics of the studies and populations and general information on the instrument and its use were collected. <b><i>Results:</i></b> Eighty-two documents were selected referring to 61 studies that were mostly carried out on the African continent (<i>n</i> = 54). Most of them aimed to determine the prevalence (<i>n</i> = 31) and associated factors (<i>n</i> = 28) of epilepsy in LMICs. Among the 61 studies, 35 were population-based, and 30 included both adults and children. A methodological heterogeneity was found between studies, and in cases where the IENT questionnaire alone did not ensure complete data collection, other tools were used concomitantly (<i>n</i> = 40). <b><i>Discussion/Conclusion:</i></b> Over the last 2 decades, the IENT questionnaire has been continuously used in different LMICs. This result favors its promotion and updating, with the inclusion of new topics related to epilepsy (e.g., comorbidities, quality of life, and stigma), current ILAE guidelines, and digital versions.
DOI: 10.17632/w82y3mmx4h
title: Dataset of Development Policy in ASEAN (1965-2019)

description: The development policy in ASEAN research & publication dataset, which was indexed by Scopus from 1965 to 2019. The dataset contains data authors, authors ID Scopus, title, year, source title, volume, issue, article number in Scopus, DOI, link, affiliation, abstract, index keywords, references, Correspondence Address, editors, publisher, conference name, conference date, conference code, ISSN, language, document type, access type, and EID.
DOI: 10.17632/fknjc39pnp
title: Child hearing loss word learning

description: This dataset contains demographic, word learning, vocabulary, and executive function data on 57 children with and without hearing loss between the ages of 4 and 8 years of age.
DOI: 10.6084/m9.figshare.28528940.v1
title: Multimodal <i>Orthopantomography</i> dental instruction data (MM-OPG)

description: This data contains 6 publicly available data with 10,043 OPGs. To construct a comprehensive and structured text data for the OPGs, 3 experienced dental experts from diverse institutions have carefully designed and summarized 11 commonly considered dental conditions during OPG analysis routine, and annotated all collected OPG images. The annotated data was then reviewed and corrected through a collaborative process among the experts to ensure consistency and accuracy.
DOI: 10.6084/m9.figshare.20425518.v2
title: Diabetes Datasets

description: There are two datasets from Chinese diabetes patients, ShanghaiT1DM and ShanghaiT2DM
DOI: 10.17632/bpsxmgpjrb
title: Data for: The contribution of global aviation to anthropogenic climate forcing in 2018
DOI: 10.17632/bwptvj2cmz
title: Data for: Statistical Modeling with Litter as a Random Effect in Mixed Models to Manage “Intralitter Likeness”

description: The data files here included are simulated data, the ranges for which were based on data from studies of C57BL6J mice, previously analyzed and published. The files include one data set of N = 180 from 30 litters, 3 treatment groups, 10 litters per treatment, 6 mice per litter, with equal numbers of males (n = 3) and females (n = 3) per litter. Also provided are 4 data sets of N = 60 each, that were drawn from the larger data set of N = 180, and which include 1 "representative" male and 1 "representative" female per litter. Each data set includes five variables: mouse ID, litter, sex, group, and body weight at post-natal day 21. *These datasets were created solely for the purpose of demonstrating differences in statistical modeling when litter clusters complicate data analysis. Please see complete manuscript for a full discussion of the topic.
DOI: 10.17632/ypdtngcbsf
title: AKD in cirrhosis

description: Outpatients with cirrhosis and renal impairment
DOI: 10.6084/m9.figshare.15789372.v1
title: A computational protocol to estimate the divergence times of Alphaproteobacteria based on mitochondrial endosymbiosis and eukaryotic fossils

description: Data and codes for the book chapter "A computational protocol to estimate the divergence times of Alphaproteobacteria based on mitochondrial endosymbiosis and eukaryotic fossils". See readme.docx for descriptions.<br><b>Citation</b>Wang S, Luo H. A computational protocol to estimate the divergence times of Alphaproteobacteria based on mitochondrial endosymbiosis and eukaryotic fossils. https://figshare.com/s/cab7de202ca2209764b7
DOI: 10.6084/m9.figshare.17111069.v2
title: data.xls

description: Data for the multiple linear regression analysis on the evaluation factors of resident demand
DOI: 10.6084/m9.figshare.7466582.v1
title: Supplementary Material for: Short-Term Steroid Regimen for Adult Steroid-Sensitive Minimal Change Disease

description: <b><i>Background:</i></b> In pediatric patients with steroid-sensitive nephrotic syndrome, recent trials have revealed that a 2-month, short-term steroid regimen is not inferior to an extended steroid course. However, the optimal duration of initial steroid therapy for adult steroid-sensitive minimal change disease (MCD) remains unclear. <b><i>Objectives:</i></b> The aim of present study was to evaluate the effectiveness of a 2-month, short-term steroid regimen in the treatment of adult steroid-sensitive MCD patients. <b><i>Method:</i></b> This was a prospective observational study. Adult patients with steroid-sensitive MCD (<i>n</i> = 35) who were initiated on a short-term steroid regimen between January 2015 and June 2016 were included. The details of the regimen are as follows: (1) prednisolone was administered at an initial dose of 0.8–1.0 mg/kg/day and continued for 4–6 weeks and (2) dosage was reduced to 0.5–0.6 mg/kg/alternate day and continued for 4 weeks. Control patients (<i>n</i> = 140), who were treated using conventional steroid administration, were selected from our previous adult MCD cohort. All patients fulfilled the following criteria: biopsy-proven MCD, age ≥20 years, first episode of nephrotic syndrome, and attainment of complete remission within 4 weeks. The following parameters of patients who received short-term treatment regimen and control patients were compared: any relapse and frequent relapse, adverse events caused by steroid treatment and cumulative steroid dose. <b><i>Results:</i></b> Throughout the observation period (median: 17.3 months), 24 (68.6%) patients in the short-term group developed at least one relapse. The short-term regimen showed earlier occurrence of any relapse than the conventional regimen (adjusted hazard ratio [aHR] 2.45; 95% CI 1.51–3.97; <i>p</i> &lt; 0.001), but there was no difference in frequent relapse (aHR 1.31; 95% CI 0.43–3.99; <i>p</i> = 0.63). None of the patients showed any symptoms of adrenal insufficiency after discontinuation of corticosteroids. The cumulative steroid dose during the observational period was significantly lower in the short-term group than in the conventional group. <b><i>Conclusions:</i></b> The short-term steroid regimen may represent an effective treatment option that ensures lower steroid exposure when treating adult steroid-sensitive MCD patients.
DOI: 10.6084/m9.figshare.9746279.v1
title: Supplementary Material for: Predicted Indirectly ReCognizable HLA Epitopes (PIRCHE) Are Associated with Poorer Outcome after Single Mismatch Unrelated Donor Stem Cell Transplantation: A Study of the Cooperative Transplant Study Group (KTS) of the German Group for Bone Marrow and Stem Cell Transplantation (DAG-KBT)

description: There is no established standard for selection of mismatched unrelated donors. Indirect recognition of HLA mismatches can be predicted using the model of “Predicted Indirectly ReCognizable HLA Epitopes” (PIRCHE). We performed a multicenter retrospective study evaluating the impact PIRCHE on outcome after allogeneic stem cell transplantation (allo-HSCT) from single mismatched (HLA 9/10 matched) unrelated donors. The study cohort included 424 adult recipients of HLA 9/10 matched unrelated donor transplants (9/10 MUD), treated for AML or MDS at 6 transplant centers across Germany. Detection of PIRCHE was associated with lower overall survival (OS) (47 vs. 57%, <i>p</i> = 0.04), higher non-relapse mortality (NRM) (32 vs. 20%, <i>p</i> = 0.05), and higher incidence of chronic graft-versus-host disease (GVHD) (49 vs. 31%, <i>p</i> = 0.04) at 2 years. Cumulative incidence of acute GVHD grade 2–4 at 6 months was not significantly different (30 vs. 23%, <i>p</i> = 0.2). OS for 9/10 MUD with no PIRCHE was similar to 10/10 MUD (57 vs. 55%). In multivariate analysis, PIRCHE retained negative impact on OS (RR 1.5, 95% CI 1.0–2.1, <i>p</i> = 0.03) and NRM (RR 1.7, 95% CI 1.0–2.9, <i>p</i> = 0.03). To the best of our knowledge, for the first time, we show the association of PIRCHE and survival outcome after allo-HSCT. The PIRCHE model, if validated in an independent cohort, may allow selection of permissible HLA mismatches that enable improved transplant outcome.
DOI: 10.17632/h6ds7c7rxt
title: LINF_170019300

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.6084/m9.figshare.21899910.v2
title: Table S3

description: <b>Table S3.</b> NLRtracker output for each catalog of annotated NLRs in each of the 32 sweetpotato and 3 wild relative genotypes.
DOI: 10.6084/m9.figshare.4877432.v1
title: 3D gait analysis data of children with CP used for gait classification

description: The data results from a search of the database of the clinical motion analysis laboratory of University Hospital Pellenberg for gait analysis sessions of children with unilateral or bilateral spastic CP, aged between 3 to 18 years and GMFCS levels I, II, or III. Children with marked signs of dystonia or ataxia were excluded, but any previous treatments were allowed.Data collection is as described by Nieuwenhuys et al. (Nieuwenhuys A, Papageorgiou E, Molenaers G, Monari D, De Laet T, Desloovere K. Inter- and intrarater clinician agreement on joint motion patterns during gait in children with cerebral palsy. Dev Med Child Neurol. 2017, doi 10.1111/dmcn.13404). Briefly, the data was obtained by a standardized 3DGA measurement using optoelectronic cameras (Vicon Motion Systems, Oxford, UK), observing reflective markers, attached by clinical experts to the anatomical landmarks of the child’s lower legs, following the Plug-In-Gait marker configuration. Children were walking barefoot at a self-selected speed. The joint angles and their derivatives were obtained through the Nexus software. Additionally, the kinematic data was time-normalized to the overall gait cycle (pelvis in the sagittal (PS), coronal (PC), and transverse (PT) plane; hip in the sagittal (HS), coronal (HC), and transverse (HT) plane; and foot progression angle (FPA)) or to the stance and swing phase (knee during stance (KSTS) and during swing (KSWS) in the sagittal plane; ankle during stance (ASTS) and during swing (ASWS) in the sagittal plane) and interpolated resulting in 51 data points for each time-varying variable. All available trials were included in the study and classified according to the consensus-based joint motion patterns [6], by either one of the two involved clinical experts. For each patient, 2 to 15 trials were used per session, with an average number of four trials. Multiple sessions per patient could be included, involving sessions before and after intervention (botulinum toxin injections, selective dorsal rhizotomy or orthopaedic surgery), as well as follow-up sessions expression the natural history (275 patients had one session, 67 had two sessions and 14 patients had more than two sessions included in the database). The interval between gait analysis sessions was 2 to 3 months for botulinum toxin injections, and 1 year for selective dorsal rhizotomy and orthopaedic surgery. Including gait analysis sessions before and after interventions created a generic database that allows to develop classification algorithms that are valid for all clinically common patient conditions. This classification was used as the ground-truth when training and validating the automatic classifiers. Pathological gait patterns were classified in comparison to the averaged walking patterns of 56 typically developing children, aged between 5 and 18 years, who had no previous history of neuromotor or musculoskeletal disorders.
DOI: 10.6084/m9.figshare.13031114.v3
title: BIOL3250_birds_datasheet (1).csv

description: Pilot observational study of bird frequency and behaviour in the city of Vaughan from the period of September 25, 2020 to September 28, 2020. The purpose of the study was to identify common bird species and observable behaviour in local neighbourhood locations. Every day during dusk, from 6:00 pm to 7:00 pm, 60-minute observations were conducted to maintain consistency in the time of observation between locations. Data was collected at one of the following sites each day, respectively: Davos & Pine Valley park, Crofters Pond, William Glan Jay Greenway Trail and Fossil Mountain Pond. An area located approximately 250 metres from the start of William Glan Jay Greenway Trail was chosen to maintain a singular point of observation consistent with other locations. A binocular was used to observe behaviours in locations where bird visibility was relatively low. Behaviours noted were accurately defined through ethograms used in an online peer-reviewed journal paper (Katajamaa et al., 2018).
DOI: 10.6084/m9.figshare.26496160.v6
title: How Graph Neural Network Interatomic Potentials Extrapolate: Role of the message-passing algorithm

description: Supplementary data regarding the graph neural network interatomic potential paper
DOI: 10.17632/jhggs6tbw4
title: Musculoskeletal symptoms from online learning: systematic review and meta-analysis

description: Supplementary file 1: Search strategies.
Supplementary file 2: Study prevalence.
Supplementary file 3: Funnel plot.
PRISMA_2020_checklist
DOI: 10.17632/k66xjbnp7d
title: Data for: Learning about risk: machine learning for risk assessment

description: In order to avoid potential damage during drilling operations for a new offshore Oil&Gas well, a semi-submersible drilling unit should maintain the position above the wellhead. This is particularly critical if the platform is located in shallow waters, where small changes of position lead to higher riser (pipe connecting the platform to the subsea drilling system) angles. Exceeding physical inclination limits may result in damages to wellhead, Blowout Preventer (BOP – sealing the well) or Lower Marine Riser Package (LMRP – connecting riser and BOP). Platform positioning is maintained in an autonomous way through the action of a set of thrusters controlled by the Dynamic Positioning (DP) system. Platform position may be lost due to a series of reasons. In this case study, it is assumed that the platform thrusters exercise propulsion towards a wrong direction, leading to a scenario of "drive-off. If the rig moves to an offset position, specific alarms turn on and suggest the DPO to stop the drive-off scenario by deactivating the thrusters and initiating the manual Emergency Disconnect Sequence (EDS) for the disconnection of the riser from the BOP. If the manual EDS ultimately fails, the automatic EDS activates at the ultimate position limit allowing for safe disconnection. Matteini (2015) studied in detail occurrence and development of drive-off scenarios. Relevant indicators were defined to assess the performance of systems and safety barriers. Indicator trends were simulated for a period of 30 years. The database includes all the simulated indicator values transformed into their derivative with respect to time t as inputs xi to the machine learning model. Since the simulated wellhead damage frequency Freq is an expression of the scenario probability p, and, in turn, the risk R, for constant scenario s and consequence c, we can state that: dFreq/dt≈dR/dt After Freq is also transformed into its derivative with respect to time t, a label y indicating frequency/risk increase or decrease is added to the database. Two datasets created from the overall database can be also found: 1. Training dataset used to train the DNN model, with 2/3 of the xi and associated y values (160), and 2. Test dataset used to test the DNN model, with about 1/3 of the xi and associated y values (79).
DOI: 10.17632/ry86wz8j4z
title: Table 1 Characteristics of patients and their caregivers

description: Characteristics of patients and their caregivers
DOI: 10.6084/m9.figshare.13150823.v1
title: maps & ped

description: map and ped files for GPAT2 and SEC24A nonsense mutations genotyped and chromosome-wide genotyped SNPs for SSC2
DOI: 10.6084/m9.figshare.23545193.v1
title: AIMD-files

description: The dataset contains input/output files of AIMD simulation, charge injection barrier and molecular dipole moment calculations of Al/PE and Al/PP interfaces.
DOI: 10.6084/m9.figshare.c.3606647_d9.v1
title: Additional file 3: of Phylogenomics and sequence-structure-function relationships in the GmrSD family of Type IV restriction enzymes

description: The alignment of GmrS domain sequences used for tree calculations. (FASTA 38Â kb)
DOI: 10.17632/f9m85ptmvc
title: Dataset for Efficient Microbes Classification System

description: It is a dataset for ten different micro-forms of life (Spirogyra, Volvox, Pithophora, Yeast, Raizopus, Penicillum, Aspergillus sp, Protozoa, Diatom, Ulothrix). It has been created for building a classification model for automatic identification. Following are the features along with their descriptions which are extracted from the microscopic images. 1. Solidity: It is the ratio of area of an object to the area of a convex hull of the object. Computed as Area/ConvexArea. 2. Eccentricity: The eccentricity is the ratio of length of major to minor axis of an object. 3. EquivDiameter: Diameter of a circle with the same area as the region. 4. Extrema: Extrema points in the region. The format of the vector is [top-left top-right right-top right-bottom bottom-right bottom-left left-bottom left-top]. 5. Filled Area: Number of on pixels in FilledImage, returned as a scalar. 6. Extent: Ratio of the pixel area of a region with respect to the bounding box area of an object. 7. Orientation: The overall direction of the shape. The value ranges from -90 degrees to 90 degrees. 8. Euler number: Number of objects in the region minus the number of holes in those objects. 9. Bounding box: Position and size of the smallest box (rectangle) which bounds the object. 10. Convex hull: Smallest convex shape/polygon that contains the object. 11. Major axis: The major axis is the endpoints of the longest line that can be drawn through the object. Length (in pixels) of the major axis is the largest dimension of the object. 12. Minor axis: The axis perpendicular to the major axis is called the minor axis. Length (in pixels) of the minor axis is the smallest line connecting a pair of points on the contour. 13. Perimeter: Number of pixels around the border of the region. 14. Centroid: Centre of mass of the region. It is a measure of object’s location in the image. 15. Area: Total number of pixels in a region/shape.
DOI: 10.17632/p4ft7v7ss6
title: GREEN MARKETING

description: the study examines the mediating roles of green awareness and green loyalty in the relationships between green marketing practices and consumer purchasing intention, focusing on the cosmetic industry of a developing economy, notably Ghana. This raw data contains all the information obtained from the consumers of green cosmetic products in Ghana in line with the research hypotheses. The data was obtained through self-administered questionnaires with the assistance of three well-trained and resourced field assistants. After data collection drastic measures were put in place to screen and clean the data to avoid high missing values. Also, the data was coded and processed using the IBM SPSS software for easy usage in the SmartPLS software.
DOI: 10.6084/m9.figshare.25155581.v1
title: Contraction Analysis of EHTs

description: The first sheets shows a summary of the contractile kinetics of engineered heart tissues constructed with (2,3,4) and without iPSC-CFs (5,6,7). The second sheet shows the raw data of the measurements of each contraction of the EHT.
DOI: 10.6084/m9.figshare.6669251.v1
title: CERQ-k Spanish version

description: Database used for the validation of the CERQ-k Spanish version
DOI: 10.6084/m9.figshare.14650512.v1
title: THC-REDUCED-consumption_data_202011.csv

description: Sample of consumption_data_202011.csv
DOI: 10.6084/m9.figshare.16308201.v2
title: CAMI UG (Co-assembly) dataset and binning results

description: CAMI UG dataset from the toy Human Microbiome Project dataset of the second Critical Assessment of Metagenomic Interpretation. Contains the following files.<br>- Contigs file- Paths file (metaSPAdes)- Assembly graph file (metaSPAdes)- Abundance file- Binning results (including CheckM results)
DOI: 10.17632/fzmx3vkt66
title: Code for a Dynare Toolbox for Social Learning Expectations

description: This is the code of the Toolbox described in Grimaud, A., Salle, I. & Vermandel, G. (Forthcoming), A Dynare Toolbox for Social Learning Expectations. Journal of Economic Dynamics and Control.
DOI: 10.17632/mjt2z298jw
title: Data for physico-chemical limnological concentrations determination in aquaponic pond

description: Understanding the physico-chemical interactions on outdoor artificial aquaponics pond is the fundamental for effective nutrient dynamics in cultivating fishes and vegetable crops. The current trend of water quality monitoring is through time consuming laboratory experiments or deployment of expensive chemical sensors. This dataset contains water temperature, pH and electrical conductivity sensor-acquired data from temperature perturbed aquaponic pond water samples collected from 5 zones in a 250 cubic meter pond in Morong, Rizal, Philippines, and the corresponding dissolved organic compound namely nitrate, phosphate, and potassium absorbances and concentrations through spectrophotometry in the UV-Vis-NIR spectrum. Codes for principal component analysis in selecting the characteristic activated water bands resembling nutrient biomarkers detection, and the codes for regression based decision tree, recurrent neural network and multigene symbolic regression genetic programming for nutrient prediction were provided.