cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/1rheh-djw37
title: Vibrio pH 6

description: Vibrio cholerae, LB, pH 6
description: <strong>Tilt Series Date:</strong> 2013-12-26</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> TRH7000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MKW1383 grown overnight in LB media, pH 6</p>
  aba2013-12-26-26_slicer5428.jpg: Chemoreceptor
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-12-26-26/rawdata/</p>VibriopH6LB0027.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-12-26-26/rawdata/VibriopH6LB0027.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibriopH6LB0027_part121_26.rec,  Reconstruction (Pixel Size 1.56 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-12-26-26/3dimage_36659/VibriopH6LB0027_part121_26.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mb06s-zg270
title: dK203_3h_induced

description: This is the strain in which dQ and dK have been deactivated and the strain is inducible for dQ
description: <strong>Tilt Series Date:</strong> 2014-12-27</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum </p>
<strong>Strain:</strong> deltaQ 167</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Arash Komeili</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-27-17/rawdata/</p>dK_3hinduced_atlas100006.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-27-17/rawdata/dK_3hinduced_atlas100006.mrc"
        > <i class="download icon"></i> Download </a></p>

        dK_3hinduced_atlas100006_full.rec,  Reconstruction (Pixel Size 2.4 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-27-17/3dimage_49970/dK_3hinduced_atlas100006_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/jar83-r2e10
title: M222R chemoreceptor mutant

description: M222R HAMP mutant locked in 'CHeA inactivating state'
description: <strong>Tilt Series Date:</strong> 2010-03-19</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> John Parkinson </p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB medium, induced with salycilate (0.6 µM) for three hours, then penicillin treated for one hour </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-03-19-16/rawdata/</p>10mar19a_EcoliM222K_016.st,  Tilt Series (Pixel Size 0.632 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-03-19-16/rawdata/10mar19a_EcoliM222K_016.st"
        > <i class="download icon"></i> Download </a></p>

        10mar19a_EcoliM222K_016.rec,  Reconstruction (Pixel Size 0.632 nm), 265.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-03-19-16/3dimage_12809/10mar19a_EcoliM222K_016.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/688ee-1zd80
title: Agrobacterium tumefaciens

description: C58 wild type
description: <strong>Tilt Series Date:</strong> 2013-08-01</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 19500x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambyski</p>
<strong>Purification / Growth Conditions / Treatment:</strong> induced for T-pili with 300mM AS</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-01-48/rawdata/</p>c58_au_300uM0001.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-01-48/rawdata/c58_au_300uM0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        c58_au_300uM0001_full.rec,  Reconstruction (Pixel Size 2.4 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-01-48/3dimage_29641/c58_au_300uM0001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.m9fvfa
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Avena byzantina monathera, Avena byzantina nigra, Avena byzantina nigra, Avena byzantina rubra, Avena byzantina rubra, Avena byzantina secundae, Avena byzantina solida, Avena byzantina thellungiana, Avena byzantina thellungiana, Avena byzantina ursina, Avena byzantina ursina, Avena chinensis, Avena chinensis, Avena chinensis, Avena cinerea, Avena contracta, Avena diffusa, Avena diffusa trisperma, Avena diffusa segetalis, Avena dispermis, Avena distans, Avena fatua brachytricha, Avena fatua glaberrima, Avena fatua macrathera, Avena fatua setulosa, Avena fatua subpilosa, Avena fatua brachytricha, Avena fatua contracta, Avena fatua glaberrima, Avena fatua macrantha, Avena fatua macrathera, Avena fatua macrotricha, Avena fatua microtricha, Avena fatua nodipilosa, Avena fatua pilifera, Avena fatua pilosa, Avena fatua praegravis, Avena fatua sativa, Avena fatua sativa, Avena fatua setulosa, Avena fatua subuniflora, Avena fatua brachytricha, Avena fatua contracta, Avena fatua contracta, Avena fatua glaberrima, Avena fatua leiantha, Avena fatua macrotricha, Avena fatua microtricha, Avena fatua pilifera, Avena fatua pilosa)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 24 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047257-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wqssrf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Vaillantella cinnamomea)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047259-250811113504898/datasets/export for details.
DOI: 10.22002/wxg6m-p2c83
title: Vibrio Stationary Phase

description: Vibrio cholerae, deep stationary phase, 37°C, pH 7.5
description: <strong>Tilt Series Date:</strong> 2014-01-29</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> TRH7000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MKW1383 grown 28 hours in LB pH 7.5 at 37°C</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-01-29-12/rawdata/</p>VibriostationaryLBmanualblot0012.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-01-29-12/rawdata/VibriostationaryLBmanualblot0012.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibriostationaryLBmanualblot0012_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-01-29-12/3dimage_38153/VibriostationaryLBmanualblot0012_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.hvdcwb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aira caespitosa convoluta, Aira caespitosa glauca, Aira caespitosa hartmaniana, Aira caespitosa littoralis, Aira caespitosa longiaristata, Aira caespitosa minor, Aira caespitosa montana, Aira caespitosa montana, Aira caespitosa pallida, Aira caespitosa pallida, Aira caespitosa paludosa, Aira caespitosa reptans, Aira caespitosa setifolia, Aira caespitosa submutica, Aira cespitosa alpestris, Aira cespitosa tenera, Aira cespitosa alpina, Aira cespitosa borealis, Aira cespitosa glauca, Aira cespitosa hartmanniana, Aira cespitosa rhenana, Aira cespitosa alpina, Aira cespitosa altissima, Aira cespitosa ambigua, Aira cespitosa andraei, Aira cespitosa aurea, Aira cespitosa barbata, Aira cespitosa borealis, Aira cespitosa bottnica, Aira cespitosa brevifolia, Aira cespitosa brevifolia, Aira cespitosa compacta, Aira cespitosa convoluta, Aira cespitosa firmula, Aira cespitosa fluviatilis, Aira cespitosa glauca, Aira cespitosa glauca, Aira cespitosa hoppeana, Aira cespitosa humilior, Aira cespitosa humilis, Aira cespitosa littoralis, Aira cespitosa littoralis, Aira cespitosa longiaristata, Aira cespitosa lutescens, Aira cespitosa major, Aira cespitosa major, Aira cespitosa maxima, Aira cespitosa minor, Aira cespitosa montana, Aira cespitosa montana)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047258-250811113504898/datasets/export for details.
DOI: 10.22002/zwyfx-jab87
title: E-coli mini cells type V CDI+

description: type V secretion system
description: <strong>Tilt Series Date:</strong> 2014-03-04</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Enterobacter cloacae</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 190.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Drs. David Low and Chris Hayes, UCSB</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-03-04-6/rawdata/</p>atlas1_0003.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-03-04-6/rawdata/atlas1_0003.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas1_0003_part131_4.rec,  Reconstruction (Pixel Size 1.28 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-03-04-6/3dimage_39575/atlas1_0003_part131_4.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/x5a3y-twb06
title: Falke C+O3

description: Crosslinking sample C+O3
description: <strong>Tilt Series Date:</strong> 2014-08-07</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joe Falke</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-08-07-1/rawdata/</p>FalkeCplusO3tomo0001.mrc,  Tilt Series (Pixel Size 0.64 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-08-07-1/rawdata/FalkeCplusO3tomo0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        FalkeCplusO3tomo0001_full.rec,  Reconstruction (Pixel Size 2.56 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-08-07-1/3dimage_45301/FalkeCplusO3tomo0001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/fr3a1-rys93
title: Rhodobacter sphaeroides cryosect

description: Rhodobacter sphaeroides JPA 543 with components of the cytoplmasmic array overexpressed
description: <strong>Tilt Series Date:</strong> 2013-09-13</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 41000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Judy Armitage, sectioned by Mark Ladinsky</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-13-27/rawdata/</p>Rhodobactercryosectionssept0044.mrc,  Tilt Series (Pixel Size 0.26 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-13-27/rawdata/Rhodobactercryosectionssept0044.mrc"
        > <i class="download icon"></i> Download </a></p>

        Rhodobactercryosectionssept0044_part61_42.rec,  Reconstruction (Pixel Size 0.52 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-13-27/3dimage_31124/Rhodobactercryosectionssept0044_part61_42.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.u9qmra
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Perdix perdix",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047260-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/me834-s9y10
title: Cos7_pNL_DN

description: Cos7 cells transfected with pNLGFP provirus construct
description: <strong>Tilt Series Date:</strong> 2012-10-05</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Cos7</p>
<strong>Strain:</strong> Cos7 cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: None μm,  magnification: 21500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFTomo</p>
<strong>Collaborators and Roles:</strong> pNLGFP construct provided by Irvin Chen, UCLA</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-10-05-41/rawdata/</p>12oct05_129_1_Cos7_pNL_DN_AT1BT1_0034.mrc,  Tilt Series (Pixel Size 0.49 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-10-05-41/rawdata/12oct05_129_1_Cos7_pNL_DN_AT1BT1_0034.mrc"
        > <i class="download icon"></i> Download </a></p>

        12oct05_129_1_Cos7_pNL_DN_AT1BT1_0034_part122_2.rec,  Reconstruction (Pixel Size 1.96 nm), 530.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-10-05-41/3dimage_24139/12oct05_129_1_Cos7_pNL_DN_AT1BT1_0034_part122_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.16951671
title: Supplemental files 1, 2, 3, 5 & 6 for Estape, C.J., Morgan Estape, A., Robertson, D.R., Pena, E. & Dunlap-Smith, A.G. (2025) An update to the inventory of reef-fishes for Colombia's Caribbean mainland coast: a photographic catalog from Santa Marta and Cartagena. Journal of the Ocean Science Foundation, 43, 45–66.

description: Supplemental Files 1, 2, 3, 5 & 6 datasets and lists for

Estape, C.J., Morgan Estape, A., Robertson, D.R., Pena, E. & Dunlap-Smith, A.G. (2025) An update to the inventory of reef-fishes for Colombia’s Caribbean mainland coast: a photographic catalog from Santa Marta and Cartagena. Journal of the Ocean Science Foundation, 43, 45–66.

Supplemental File 1 - Dive site maps and coordinates

Supplemental File 2 - Detailed dive log for the 204 survey dives

Supplemental File 3 - Nomenclature Updates 

Supplemental File 5 - List with location details for the 13 new species records  

Supplemental File 6 - Range extension updates for GBIF SIAM OBIS
DOI: 10.5281/zenodo.16891390
title: Supplemental files 1, 2, 3, 5 & 6 for Estape, C.J., Morgan Estape, A., Robertson, D.R., Pena, E. & Dunlap-Smith, A.G. (2025) An update to the inventory of reef-fishes for Colombia's Caribbean mainland coast: a photographic catalog from Santa Marta and Cartagena. Journal of the Ocean Science Foundation, 43, 45–66.

description: Supplemental Files 1, 2, 3, 5 & 6 datasets and lists for

Estape, C.J., Morgan Estape, A., Robertson, D.R., Pena, E. & Dunlap-Smith, A.G. (2025) An update to the inventory of reef-fishes for Colombia’s Caribbean mainland coast: a photographic catalog from Santa Marta and Cartagena. Journal of the Ocean Science Foundation, 43, 45–66.

Supplemental File 1 - Dive site maps and coordinates

Supplemental File 2 - Detailed dive log for the 204 survey dives

Supplemental File 3 - Nomenclature Updates 

Supplemental File 5 - List with location details for the 13 new species records  

Supplemental File 6 - Range extension updates for GBIF SIAM OBIS
DOI: 10.22002/xt3zy-azd67
title: MP P41 27.5KX

description: Mycoplasma pneumonia P200 mutant
description: <strong>Tilt Series Date:</strong> 2010-01-04</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-04-13/rawdata/</p>10jan04a_B089b_018.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-04-13/rawdata/10jan04a_B089b_018.mrc"
        > <i class="download icon"></i> Download </a></p>

        10jan04a_B089b_018_part.rec,  Reconstruction (Pixel Size 1.548 nm), 419.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-04-13/3dimage_16857/10jan04a_B089b_018_part.rec"
        > <i class="download icon"></i> Download </a></p>