cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.d3khvg
title: Occurrence Download

description: A dataset containing 59995 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is CardObs : Observations naturalistes issues de l'outil CardObs-Données naturalistes de Monsieur François FOURNIER"
 ]
}

 The dataset includes 59995 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0232094-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.38nncc
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Platyrrhinus matapalensis Velazco, 2005"
 ]
}

 The dataset includes 38 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0286207-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tjj7lp
title: Occurrence Download

description: A dataset containing 315 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Papilio canadensis Rothschild & Jordan, 1906",
 "Country is United States of America"
 ]
}

 The dataset includes 315 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000709-150805223722583/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4p9a6t
title: Occurrence Download

description: A dataset containing 1699 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Calidris bairdii (Coues, 1861)"
 ]
}

 The dataset includes 1699 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052822-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bz32k7
title: Occurrence Download

description: A dataset containing 235 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lissodelphis Gloger, 1841"
 ]
}

 The dataset includes 235 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0246057-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yzwuqt
title: Occurrence Download

description: A dataset containing 189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2024",
 "Geometry POLYGON ((-130.7383528944533 -59.46314024951374, -130.7383528944533 32.71876227804215, -26.26729810228821 32.71876227804215, -26.26729810228821 -59.46314024951374, -130.7383528944533 -59.46314024951374))",
 "OccurrenceStatus is Present",
 "TaxonKey is Myrmoderus eowilsoni Moncrieff, Johnson, O, Lane, Beck, Angulo & Fagan, 2017"
 ]
}

 The dataset includes 189 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052066-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7skev6
title: Occurrence Download

description: A dataset containing 11091 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ochotona princeps (Richardson, 1828)"
 ]
}

 The dataset includes 11091 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0323309-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xg4bv2
title: Occurrence Download

description: A dataset containing 14152 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Furnarius Vieillot, 1816"
 ]
}

 The dataset includes 14152 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061335-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p59cxe
title: Occurrence Download

description: A dataset containing 551 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euphorbia jolkinii Boiss."
 ]
}

 The dataset includes 551 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0243778-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x47kvk
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Donax dentifer Hanley, 1843"
 ]
}

 The dataset includes 36 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0415019-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.21jcad
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aleurites moluccanus var. rockinghamensis Baill."
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000709-160509122628363/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qsut4h
title: Occurrence Download

description: A dataset containing 3761 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((4.925 52.175,4.975 52.175,4.975 52.225,4.925 52.225,4.925 52.175))",
 "DatasetKey is Observation.org, Nature data from around the World",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 3761 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0305535-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wuk2vp
title: Occurrence Download

description: A dataset containing 792 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "TaxonKey is Elaeagnus angustifolia L."
 ]
}

 The dataset includes 792 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075066-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6c4qh7
title: Occurrence Download

description: A dataset containing 675 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ficus neriifolia Sm."
 ]
}

 The dataset includes 675 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0243824-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.skyjwa
title: Occurrence Download

description: A dataset containing 765403 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Solanaceae",
 "Year 2000-2021"
 ]
}

 The dataset includes 765403 records from 831 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0297808-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1btzhf
title: Occurrence Download

description: A dataset containing 1494 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Serjania lethalis A.St.-Hil."
 ]
}

 The dataset includes 1494 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000709-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b6ku59
title: Occurrence Download

description: A dataset containing 57088 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ailanthus altissima (Mill.) Swingle"
 ]
}

 The dataset includes 57088 records from 496 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080779-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.12299663
title: Additional file 6 of Protein phosphorylation networks in spargana of Spirometra erinaceieuropaei revealed by phosphoproteomic analysis

description: Additional file 6: Table S5. Functional enrichment of phosphoproteins in the GO analysis.
DOI: 10.6084/m9.figshare.12299645.v1
title: Additional file 3 of Protein phosphorylation networks in spargana of Spirometra erinaceieuropaei revealed by phosphoproteomic analysis

description: Additional file 3: Table S3. Detailed list of GO terms classification.
DOI: 10.6084/m9.figshare.12299672
title: Additional file 8 of Protein phosphorylation networks in spargana of Spirometra erinaceieuropaei revealed by phosphoproteomic analysis

description: Additional file 8: Table S7. Functional enrichment of phosphoproteins in protein domain.
DOI: 10.6084/m9.figshare.12299612.v1
title: Additional file 16 of Integrated small RNA and mRNA expression profiles reveal miRNAs and their target genes in response to Aspergillus flavus growth in peanut seeds

description: Additional file 16: Table S13. Correlation analysis of miRNAs expression profiles and their target genes between peanut varieties.
DOI: 10.6084/m9.figshare.14937815
title: Construction of a novel risk model based on the random forest algorithm to distinguish pancreatic cancers with different prognoses and immune microenvironment features

description: Immune-related long noncoding RNAs (irlncRNAs) are actively involved in regulating the immune status. This study aimed to establish a risk model of irlncRNAs and further investigate the roles of irlncRNAs in predicting prognosis and the immune landscape in pancreatic cancer. The transcriptome profiles and clinical information of 176 pancreatic cancer patients were retrieved from The Cancer Genome Atlas (TCGA). Immune-related genes (irgenes) downloaded from ImmPort were used to screen 1903 immune-related lncRNAs (irlncRNAs) using Pearson’s correlation analysis (R &gt; 0.5; p &lt; 0.001). Random survival forest (RSF) and survival tree analysis showed that 9 irlncRNAs were highly correlated with overall survival (OS) according to the variable importance (VIMP) and minimal depth. Next, Cox regression analysis was used to establish a risk model with 3 irlncRNAs (LINC00462, LINC01887, RP11-706C16.8) that was evaluated by Kaplan-Meier analysis, the areas under the curve (AUCs) of the receiver operating characteristics and the C-index. Additionally, we performed Cox regression analysis to establish the clinical prognostic model, which showed that the risk score was an independent prognostic factor (p &lt; 0.001). A nomogram and calibration plots were drawn to visualize the clinical features. The Wilcoxon signed-rank test and Pearson’s correlation analysis further explored the irlncRNA signatures and immune cell infiltration, as well as the immunotherapy response.
DOI: 10.6084/m9.figshare.14937815.v1
title: Construction of a novel risk model based on the random forest algorithm to distinguish pancreatic cancers with different prognoses and immune microenvironment features

description: Immune-related long noncoding RNAs (irlncRNAs) are actively involved in regulating the immune status. This study aimed to establish a risk model of irlncRNAs and further investigate the roles of irlncRNAs in predicting prognosis and the immune landscape in pancreatic cancer. The transcriptome profiles and clinical information of 176 pancreatic cancer patients were retrieved from The Cancer Genome Atlas (TCGA). Immune-related genes (irgenes) downloaded from ImmPort were used to screen 1903 immune-related lncRNAs (irlncRNAs) using Pearson’s correlation analysis (R &gt; 0.5; p &lt; 0.001). Random survival forest (RSF) and survival tree analysis showed that 9 irlncRNAs were highly correlated with overall survival (OS) according to the variable importance (VIMP) and minimal depth. Next, Cox regression analysis was used to establish a risk model with 3 irlncRNAs (LINC00462, LINC01887, RP11-706C16.8) that was evaluated by Kaplan-Meier analysis, the areas under the curve (AUCs) of the receiver operating characteristics and the C-index. Additionally, we performed Cox regression analysis to establish the clinical prognostic model, which showed that the risk score was an independent prognostic factor (p &lt; 0.001). A nomogram and calibration plots were drawn to visualize the clinical features. The Wilcoxon signed-rank test and Pearson’s correlation analysis further explored the irlncRNA signatures and immune cell infiltration, as well as the immunotherapy response.
DOI: 10.6084/m9.figshare.12299648
title: Additional file 6 of Integrated small RNA and mRNA expression profiles reveal miRNAs and their target genes in response to Aspergillus flavus growth in peanut seeds

description: Additional file 6: Table S3. Known miRNA information in two peanut varieties.
DOI: 10.6084/m9.figshare.14396769.v1
title: Additional file 3 of Identification of co-expression network correlated with different periods of adipogenic and osteogenic differentiation of BMSCs by weighted gene co-expression network analysis (WGCNA)

description: Additional file 3.
DOI: 10.5522/04/25213640
title: Dataset for "<i>SolarClub: Supporting Renewable Energy Communities through an Interactive Coordination System</i>"

description: This dataset provides 1) participant interview transcripts and 2) participant household electricity usage sensor data for the corresponding paper and presentation in the upcoming CHI 2024 conference.<br>
DOI: 10.6084/m9.figshare.20688638
title: Additional file 3 of Full-length transcriptome-referenced analysis reveals crucial roles of hormone and wounding during induction of aerial bulbils in lily

description: Additional file 3: Data S1.
DOI: 10.6084/m9.figshare.13889277.v1
title: Additional file 1 of Consensus module analysis of abdominal fat deposition across multiple broiler lines

description: Additional file 1: Table S1. Summary of RNA-Seq data, QC, and read mapping.
DOI: 10.6084/m9.figshare.13889283.v1
title: Additional file 3 of Consensus module analysis of abdominal fat deposition across multiple broiler lines

description: Additional file 3: Table S2. Summary of genes within consensus modules and DEGs within FL vs. LL and HG vs. LG.
DOI: 10.5281/zenodo.10245132
title: Raw and analyzed data for manuscript "Dielectric barrier discharge air plasma as a comprehensive disinfection approach to E. coli and S. aureus biofilm management"
DOI: 10.5281/zenodo.10245133
title: Raw and analyzed data for manuscript "Dielectric barrier discharge air plasma as a comprehensive disinfection approach to E. coli and S. aureus biofilm management"
DOI: 10.5281/zenodo.10658790
title: Raw and analyzed data for manuscript "Dielectric barrier discharge air plasma as a comprehensive disinfection approach to E. coli and S. aureus biofilm management"
DOI: 10.6084/m9.figshare.13889283
title: Additional file 3 of Consensus module analysis of abdominal fat deposition across multiple broiler lines

description: Additional file 3: Table S2. Summary of genes within consensus modules and DEGs within FL vs. LL and HG vs. LG.
DOI: 10.6084/m9.figshare.20688641
title: Additional file 4 of Full-length transcriptome-referenced analysis reveals crucial roles of hormone and wounding during induction of aerial bulbils in lily

description: Additional file 4: Data S2.
DOI: 10.6084/m9.figshare.13889292
title: Additional file 6 of Consensus module analysis of abdominal fat deposition across multiple broiler lines

description: Additional file 6: Table S3. Functional enrichment correlated with genes within eight consensus modules.
DOI: 10.6084/m9.figshare.20688647.v1
title: Additional file 6 of Full-length transcriptome-referenced analysis reveals crucial roles of hormone and wounding during induction of aerial bulbils in lily

description: Additional file 6: Data S4.
DOI: 10.6084/m9.figshare.20688638.v1
title: Additional file 3 of Full-length transcriptome-referenced analysis reveals crucial roles of hormone and wounding during induction of aerial bulbils in lily

description: Additional file 3: Data S1.
DOI: 10.6084/m9.figshare.20688641.v1
title: Additional file 4 of Full-length transcriptome-referenced analysis reveals crucial roles of hormone and wounding during induction of aerial bulbils in lily

description: Additional file 4: Data S2.
DOI: 10.6084/m9.figshare.20688650.v1
title: Additional file 7 of Full-length transcriptome-referenced analysis reveals crucial roles of hormone and wounding during induction of aerial bulbils in lily

description: Additional file 7: Data S5.
DOI: 10.6084/m9.figshare.7598060.v1
title: Additional file 10: of Re-analysis of the coral Acropora digitifera transcriptome reveals a complex lncRNAs-mRNAs interaction network implicated in Symbiodinium infection

description: File S1. GO and KEGG pathway analysis of 1036 differentially expressed transcripts achieved on David website. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.12299648.v1
title: Additional file 6 of Integrated small RNA and mRNA expression profiles reveal miRNAs and their target genes in response to Aspergillus flavus growth in peanut seeds

description: Additional file 6: Table S3. Known miRNA information in two peanut varieties.
DOI: 10.6084/m9.figshare.13889296
title: Additional file 1 of Integrated analyses of the transcriptome and small RNA of the hemiparasitic plant Monochasma savatieri before and after establishment of parasite-host association

description: Additional file 1: Fig. S1. Unigene sequence length distribution in the transcriptome of M. savatieri. Fig. S2. GO classification of all unigenes in M. savatieri. Fig. S3. Heatmap clustering and qRT-PCR analysis of DEGs in M. savatieri. (a) Transcript abundances of DEGs related to starch and sucrose metabolism. (b) Relative expression levels of DEGs related to starch and sucrose metabolism. (c) Transcript abundances of DEGs related to hormone signal transduction. (d) Relative expression levels of DEGs related to hormone signal transduction. (e) Transcript abundances of DEGs related to cell part. (f) Relative expression levels of DEGs related to cell part. The error bars of qRT-PCR data indicate the standard deviations of the three replicate determinations. Fig. S4. Nucleotide length distribution of small RNAs in M. savatieri. Fig. S5. The first base distribution of known miRNAs (a) and novel miRNAs (b) in M. savatieri. In the bar graphs, the X-axis represents the length of miRNA, the number shown on the bar represents the number of miRNA at this length. Fig. S6. Heatmap clustering and qRT-PCR analysis of miRNAs in M. savatieri. (a) Sequencing abundances of miRNAs related to biological regulation. (b) Relative expression levels of miRNAs related to biological regulation. (c) Sequencing abundances of miRNAs related to membrane and organelle. (d) Relative expression levels of miRNAs related to membrane and organelle. (e) Sequencing abundances of miRNAs related to metabolism. (f) Relative expression levels of miRNAs related to metabolism. The error bars of qRT-PCR data indicate the standard deviations of the three replicate determinations. Fig. S7. qRT-PCR analysis of miRNA target genes in M. savatieri. The error bars of qRT-PCR data indicate the standard deviations of the three replicate determinations. Table S1. Transcription factor families of the DEGs related to the biological processes in the BZ/AZ comparison of M. savatieri. Table S2. Specific primers of differentially expressed genes for qRT-PCR validation. Table S3. Specific primers of differentially expressed miRNAs for qRT-PCR validation. Table S4. Specific primers of target genes of differentially expressed miRNAs for qRT-PCR validation.
DOI: 10.6084/m9.figshare.13889299
title: Additional file 2 of Integrated analyses of the transcriptome and small RNA of the hemiparasitic plant Monochasma savatieri before and after establishment of parasite-host association

description: Additional file 2. List of DEGs among different comparisons.
DOI: 10.6084/m9.figshare.13889305
title: Additional file 4 of Integrated analyses of the transcriptome and small RNA of the hemiparasitic plant Monochasma savatieri before and after establishment of parasite-host association

description: Additional file 4. List of DEmiRs among different comparisons.
DOI: 10.6084/m9.figshare.13889308
title: Additional file 5 of Integrated analyses of the transcriptome and small RNA of the hemiparasitic plant Monochasma savatieri before and after establishment of parasite-host association

description: Additional file 5. KEGG pathway of DEmiR target genes among different comparisons.
DOI: 10.6084/m9.figshare.13889302.v1
title: Additional file 3 of Integrated analyses of the transcriptome and small RNA of the hemiparasitic plant Monochasma savatieri before and after establishment of parasite-host association

description: Additional file 3. GO classification of DEGs among different comparisons.
DOI: 10.6084/m9.figshare.13889308.v1
title: Additional file 5 of Integrated analyses of the transcriptome and small RNA of the hemiparasitic plant Monochasma savatieri before and after establishment of parasite-host association

description: Additional file 5. KEGG pathway of DEmiR target genes among different comparisons.
DOI: 10.6084/m9.figshare.12299885.v1
title: Additional file 2 of Clinical application and evaluation of metagenomic next-generation sequencing in suspected adult central nervous system infection

description: Additional file 2: Data set 1. Preliminary sequencing threshold of relative abundance.