cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25420/britishmuseum.20059685.v1
title: Geolocation of project activities

description: Shapefile depicting the points of activity across the landscape assoicated with the making of the beehive for the EMKP project.
DOI: 10.25420/britishmuseum.20059703
title: Lines of travel and movement

description: Shapefile depicting GPS tracks travelling and transporting resources across the landscape.
DOI: 10.25420/britishmuseum.20059703.v2
title: Lines of travel and movement

description: Shapefile depicting GPS tracks travelling and transporting resources across the landscape.
DOI: 10.25420/britishmuseum.20059703.v1
title: Lines of travel and movement

description: Shapefile depicting GPS tracks travelling and transporting resources across the landscape.
DOI: 10.5281/zenodo.8393008
title: Supporting information for "Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa"

description: Raw VCF file for <em>Populus trichocarpa</em> V4 SNPs - Biallelic SNP variants were called for 1492 Populus trichocarpa genotypes using GATK Version 4.0 software.
DOI: 10.5281/zenodo.8393009
title: Supporting information for "Few-Shot Learning Enables Population-Scale Analysis of Leaf Traits in Populus trichocarpa"

description: Raw VCF file for <em>Populus trichocarpa</em> V4 SNPs - Biallelic SNP variants were called for 1492 Populus trichocarpa genotypes using GATK Version 4.0 software.
DOI: 10.25420/britishmuseum.20059709
title: Embobut river

description: Shapefile of the Embobut river running through the Embobut forest and down the Elgeyo escarpment.
DOI: 10.25420/britishmuseum.20059709.v2
title: Embobut river

description: Shapefile of the Embobut river running through the Embobut forest and down the Elgeyo escarpment.
DOI: 10.25420/britishmuseum.20059709.v1
title: Embobut river

description: Shapefile of the Embobut river running through the Embobut forest and down the Elgeyo escarpment.
DOI: 10.6084/m9.figshare.24192567
title: Intake and growth histories modulate bone morphology, microarchitecture, and mineralization in juvenile green turtles (<i>Chelonia mydas</i>)

description: In this study, we investigated the effects of food restriction and subsequent realimentation and compensatory growth on bone structure in juvenile green turtles (<i>Chelonia mydas</i>). Turtles were fed ad libitum food for 12 weeks (AL), restricted food for 12 weeks (R), or restricted food for 5 weeks followed by ad libitum food for 7 weeks (R-AL). After the 12<sup>th</sup> week, gross morphology (GM), microarchitecture, and mineralization of the right humerus of each turtle were analyzed. This FigShare entry includes the raw data analyzed for this project.
DOI: 10.6084/m9.figshare.24192567.v2
title: Intake and growth histories modulate bone morphology, microarchitecture, and mineralization in juvenile green turtles (<i>Chelonia mydas</i>)

description: In this study, we investigated the effects of food restriction and subsequent realimentation and compensatory growth on bone structure in juvenile green turtles (<i>Chelonia mydas</i>). Turtles were fed ad libitum food for 12 weeks (AL), restricted food for 12 weeks (R), or restricted food for 5 weeks followed by ad libitum food for 7 weeks (R-AL). After the 12<sup>th</sup> week, gross morphology (GM), microarchitecture, and mineralization of the right humerus of each turtle were analyzed. This FigShare entry includes the raw data analyzed for this project.
DOI: 10.6084/m9.figshare.24192567.v1
title: Intake and growth histories modulate bone morphology, microarchitecture, and mineralization in juvenile green turtles (<i>Chelonia mydas</i>)

description: In this study, we investigated the effects of food restriction and subsequent realimentation and compensatory growth on bone structure in juvenile green turtles (<i>Chelonia mydas</i>). Turtles were fed ad libitum food for 12 weeks (AL), restricted food for 12 weeks (R), or restricted food for 5 weeks followed by ad libitum food for 7 weeks (R-AL). After the 12<sup>th</sup> week, gross morphology (GM), microarchitecture, and mineralization of the right humerus of each turtle were analyzed. This FigShare entry includes the raw data analyzed for this project.
DOI: 10.6084/m9.figshare.23268791
title: Emergence of novel non-aggregative variants in <em>K. variicola</em>

description: <em>K. variicola </em>is an emergent human pathogen, but little is known about the evolution and maintenance of biodiversity in this species, the molecular mechanisms and their population dynamics. Here, we characterized the emergence of a novel rdar-like morphotype which is contingent both on the genetic background and the environment. <br>
DOI: 10.6084/m9.figshare.23268791.v1
title: Emergence of novel non-aggregative variants in <em>K. variicola</em>

description: <em>K. variicola </em>is an emergent human pathogen, but little is known about the evolution and maintenance of biodiversity in this species, the molecular mechanisms and their population dynamics. Here, we characterized the emergence of a novel rdar-like morphotype which is contingent both on the genetic background and the environment. <br>
DOI: 10.5281/zenodo.6322663
title: Boosting systemic absorption of peptides with a bioinspired buccal-stretching patch - Raw & Source Data

description: Raw and source data of according publication.
DOI: 10.5281/zenodo.6322662
title: Boosting systemic absorption of peptides with a bioinspired buccal-stretching patch - Raw & Source Data

description: Raw and source data of according publication.
DOI: 10.6084/m9.figshare.22223452
title: Review Table.xlsx

description: This is a table of 105 unique imprinting experiments sampled using a systematic web of science search. Each expirement's methods were catagorized by a variety of criteria for general analysis.
DOI: 10.5281/zenodo.8397447
title: Impact of prolonged chronic social isolation stress on behavior and multifractal complexity of metabolic rate in Octodon degus

description: We investigated the effects of prolonged chronic social isolation stress on behavioral, cognitive, and physiological performance in the social, long-lived rodent <em>Octodon degus</em>. Degu pups were separated into two social stress treatments: control (CTRL) and chronically isolated (CI) individuals from post-natal and post-weaning until adulthood. We quantified anxiety-like behavior and cognitive performance with behavioral tests. Additionally, we measured their basal metabolic rate (BMR). Data include behavioral tests and physiological traits (body mass and Basal Metabolic Rate).
DOI: 10.5281/zenodo.8397446
title: Impact of prolonged chronic social isolation stress on behavior and multifractal complexity of metabolic rate in Octodon degus

description: We investigated the effects of prolonged chronic social isolation stress on behavioral, cognitive, and physiological performance in the social, long-lived rodent <em>Octodon degus</em>. Degu pups were separated into two social stress treatments: control (CTRL) and chronically isolated (CI) individuals from post-natal and post-weaning until adulthood. We quantified anxiety-like behavior and cognitive performance with behavioral tests. Additionally, we measured their basal metabolic rate (BMR). Data include behavioral tests and physiological traits (body mass and Basal Metabolic Rate).
DOI: 10.25345/c5th8bz2t
title: MassIVE MSV000093012 - Integrated Immunopeptidomic and Proteomic Analysis of COVID-19 lung biopsies
title: Yin S, Klaeger S, Chea VA, Carulli IP, Rachimi S, Black KE, Filbin M, Hariri LP, Knipe RS, Padera RF,Stevens JD, Lane WJ, Carr SA, Wu CJ, Kim EY, and Keskin DB. 2023. Severe respiratory illness is the most prominent manifestation of patients infected with SARS-CoV-2, and yet the molecular mechanisms underlying severe lung disease in COVID-19 affected patients still require elucidation. Human leukocyte antigen class I (HLA-I) expression is crucial for antigen presentation and the host's response to SARS-CoV-2. To gain insights into the immune response and molecular pathways involved in severe lung disease, we performed immunopeptidomic and proteomic analyses of lung tissues recovered at four COVID-19 autopsy and six non-COVID-19 transplants. We found signals of tissue injury and regeneration in lung fibroblast and alveolar type I/II cells, resulting in the production of highly immunogenic self-antigens within the lungs of COVID-19 patients. We also identified immune activation of the M2c macrophage as the primary source of HLA-I presentation and immunogenicity in this context. Additionally, we identified 28 lung signatures that can serve as early plasma markers for predicting infection and severe COVID-19 disease. These protein signatures were predominantly expressed in macrophages and epithelial cells and were associated with complement and coagulation cascades. Our findings emphasize the significant role of macrophage-mediated immunity in the development of severe lung disease in COVID-19 patients.
DOI: 10.15129/220e3e34-588b-4a94-93eb-8bd73cd2bf3e
title: Supplementary Files 1& 2: Thompson & Pickard: The amino acid composition of a protein influences its expression

description: Supplementary File 1 - Dataset in Excel spreadsheet form associated with paper submitted to PLOS ONE TAB, TITLE, Description 1 Amino acid composition calculator The Excel methodology for extracting amino acid frequency data from each individual protein in a proteome downloaded in FASTA format 2 Human proteome AA composition Summary Table of amino acid composition for each protein in the human proteome. Additional characteristics are also included such as AA analysis by nutritional class. 3 25 selenocysteine The 25 human proteins that contain a selenocysteine substitution which make the CHECKSUM of the analysis of all 20 conventional analysis deviate from a total of 1 4 Testing pop. norm. distribution Lilliefors/Kolmogorov-Smirnov Tests of fEAA and fCEAA distritbution profiles 5 Relative proportions of E, C, N Methodology for creating smoothed plots of realtive proprtions of nutritional class of amino acids as a function of expression rank. 6 MLR Multiple Linear Regression analyses between amino acid frequency/property and expression level - across human organs, species. Summary tables for each test are shown together with the summary table 7 High fEAA & fCEAA diseases Those proteins at the extremes of AA composition with multiple DisGeNET disease annotations 8 Multigenic disease statistics Lists of manually collated or published disease risk proteins for several diseases/phenotypes. Statistical analysis of their fAA profiles compared to the whole proteome distribution. Supplementary File 2 - Dataset in Excel of Gene Ontology analyses: plotting the MLR+ and MLR- values for each protein in that gene ontology group. Asking whether each MLR distribution (+/-) significantly differs from the entire population distribution of proteins in the proteome. TAB TITLE 1 E. coli abiotic stress 2 E. coli translation 3 S. cerevisiae translation 4 A. thaliana translational elongation 5 A. thaliana high light intensity 6 A. thaliana water deprivation 7 A. thaliana cold acclimation 8 H. sapiens detoxification 9 H. sapiens cytoplasmic translation 10 H. sapiens response to stress
DOI: 10.5281/zenodo.8393868
title: BQE WIM Data Year 6 Project (Evaluation of Integrated Overweight Enforcement System using High Accuracy WIM System and Non-Proprietary ALPR System)

description: NEW BQE (Brooklyn-Queens Expressway) WIM Data for QB (Queens Bound) for Direct Overweight Enforcement
DOI: 10.5281/zenodo.8393869
title: BQE WIM Data Year 6 Project (Evaluation of Integrated Overweight Enforcement System using High Accuracy WIM System and Non-Proprietary ALPR System)

description: NEW BQE (Brooklyn-Queens Expressway) WIM Data for QB (Queens Bound) for Direct Overweight Enforcement
DOI: 10.18112/openneuro.ds004785.v1.0.1
title: EEG data for paper titled - Precise cortical contributions to feedback sensorimotor control during reactive balance
DOI: 10.57745/kqddmd
title: UMBD.zip

description: Urban Materials BRDF Database
DOI: 10.6073/pasta/0ff7aa0b2897d93c51730d999e5f6976
title: Meteorological data from El Verde Field Station: NADP Tower

description: Meteorological sensors are located at the top of a 20 m tower, the NADP Tower, behind the main buildings of El Verde Field Station, 350 masl. No large trees are present near the tower. Sensors are connected to a Campbell 1000X data logger, with a storage module, and downloaded every two weeks using a wireless radio connection from the laboratory to the tower. Data are compiled at the station before it is made available. The station was initiated in 2000. Complementary manual measurements of rainfall and maximum and minimum air temperatures are taken on a daily basis at a separate physical location. Support for this work was provided by grants BSR-8811902, DEB-9411973, DEB-9705814 , DEB-0080538, DEB-0218039 , DEB-0620910 , DEB-1239764, DEB-1546686, and DEB-1831952 from the National Science Foundation to the University of Puerto Rico as part of the Luquillo Long-Term Ecological Research Program. Additional support provided by the University of Puerto Rico and the International Institute of Tropical Forestry, USDA Forest Service.
DOI: 10.57745/jsqjoh
title: README_Dataset-EN.txt

description: :unav
DOI: 10.57745/wtuqev
title: Geoloc_ds022023.7z

description: :unav
DOI: 10.57745/zzfczd
title: photos.7z

description: :unav
DOI: 10.57745/do9tmq
title: Geoloc_ds022023.7z

description: :unav
DOI: 10.57745/rcephi
title: photos.7z

description: :unav
DOI: 10.57745/zzhmnw
title: README_Dataset-EN.txt

description: :unav
DOI: 10.5281/zenodo.7751789
title: Data and source code of "Refining intra-patch connectivity measures in landscape fragmentation and connectivity indices"

description: Data and source code related to the article "Refining intra-patch connectivity measures in landscape fragmentation and connectivity indices". The script "generate_artificial_landscapes.R" was used to produce the artificial landscapes located in the folder "ARTIFICAL_LANDSCAPES". The package rflsgen was used to produce these landscapes. The script "evaluation_artificial_landscapes.R" was used to evaluate these artificial landscapes, in accordance with what is presented in the article. It relies on the intra R package also introduced in the article. The script "evaluation_real_landscape.R" was used to evaluate the Koniambo massif landscape (New Caledonia), according to what is presented in the article. It also relies on the intra R package.
DOI: 10.5281/zenodo.7751790
title: Data and source code of "Refining intra-patch connectivity measures in landscape fragmentation and connectivity indices"

description: Data and source code related to the article "Refining intra-patch connectivity measures in landscape fragmentation and connectivity indices". The script "generate_artificial_landscapes.R" was used to produce the artificial landscapes located in the folder "ARTIFICAL_LANDSCAPES". The package rflsgen was used to produce these landscapes. The script "evaluation_artificial_landscapes.R" was used to evaluate these artificial landscapes, in accordance with what is presented in the article. It relies on the intra R package also introduced in the article. The script "evaluation_real_landscape.R" was used to evaluate the Koniambo massif landscape (New Caledonia), according to what is presented in the article. It also relies on the intra R package.
DOI: 10.5281/zenodo.8399767
title: Data and source code of "Refining intra-patch connectivity measures in landscape fragmentation and connectivity indices"

description: Data and source code related to the article "Refining intra-patch connectivity measures in landscape fragmentation and connectivity indices". The script "generate_artificial_landscapes.R" was used to produce the artificial landscapes located in the folder "ARTIFICAL_LANDSCAPES". The package rflsgen was used to produce these landscapes. The script "evaluation_artificial_landscapes.R" was used to evaluate these artificial landscapes, in accordance with what is presented in the article. It relies on the intra R package also introduced in the article. The script "evaluation_real_landscape.R" was used to evaluate the Koniambo massif landscape (New Caledonia), according to what is presented in the article. It also relies on the intra R package.
DOI: 10.5281/zenodo.8399486
title: Database of pyroclastic cover deposit thickness measurements (PT-Cam) in peri-volcanic areas of Campania (Italy)

description: In an eruptive event, tephra deposits (i.e. ash and pumice) disperse in the atmosphere and deposit on the ground surface according to the speed and direction of the wind. Because the geotechnical and hydraulic properties of the unconsolidated pyroclastic fall deposits usually differ from the bedrock, their spatial thickness significantly influences geomorphological and hydrogeological processes such as landscape evolution, erosion, landslide, and hillslope hydrogeology. The PT-Cam database presents the thickness of tephra deposits (i.e. the unconsolidated materials over the bedrock) in Campania region (Italy), measured through in-situ investigations of some territories around the Somma-Vesuvius, Campi Flegrei, Roccamonfina, and Ischia volcanoes during the last decades. The measurements were conducted with probing tests, dynamic penetration tests, trenches, man-made pits, seismic surveys, and outcrops. Explanation for database attribute: CODE: identification code of the measurement; z: measured thickness expressed in cm; type_z: thickness type (i.e. if investigation has reached to the bedrock the type is “total” otherwise it is “partial”); type_investigation: method of in-situ investigation; locality: municipality to which the measurement point belongs; Longitude, Latitude: km coordinates in UTM WGS 84 system.
description: {"references": ["Matano F. et al. (2016) Thickness of pyroclastic cover beds: the case study of Mount Albino (Campania region, southern Italy). Journal of Maps, 12, S1, 79-87, DOI 10.1080/17445647.2016.1158668", "Cuomo S. et al. (2021) Multiseasonal probabilistic slope stability analysis of a large area of unsaturated pyroclastic soils. Landlides, 18, 1259\u20131274, OI 10.1007/s10346-020-01561-w"]}
DOI: 10.6084/m9.figshare.24231331
title: Analysis of the mediating role of self-control among Chinese college students between physical activities and aggressive behavior

description: This study aims to explore the mediating role of self-control in the relationship between physical activity and aggressive behavior among college students. And it provides a basis for the prevention and control of aggressive behavior among college students. In terms of the methods, this study employs Physical Activity Rating Scale (PARS-3), Self-Control Scale (SCS) and Chinese version of Buss&Perry aggression questionnaire (AQ-CV) on 950 college students. And mediating effect test and Bootstrap analysis are applied. The analyses yielded the following findings. (1) Physical activity is significantly negatively correlated with aggressive behavior and self-control (r=-0.18, 0.24; P＜0.01) and self-control is positively correlated with aggressive behavior (r=-0.47; P＜0.01). (2) Physical activity not only negatively predicts college students' aggressive behavior (B=-0.08; P&lt;0.01), but also positively predicts self-control (B=0.24; P&lt;0.01) Self-control negatively predicts college students' aggressive behavior (B=-0.52; P&lt;0.01). Self-control plays the mediating role in the relationship between physical activity and aggressive behavior among college students, with the ratio of 60.29%. It is concluded that physical activity can not only directly improve the problem of aggressive behavior among college students, but also indirectly improve it through self-control.
DOI: 10.6084/m9.figshare.24231331.v1
title: Analysis of the mediating role of self-control among Chinese college students between physical activities and aggressive behavior

description: This study aims to explore the mediating role of self-control in the relationship between physical activity and aggressive behavior among college students. And it provides a basis for the prevention and control of aggressive behavior among college students. In terms of the methods, this study employs Physical Activity Rating Scale (PARS-3), Self-Control Scale (SCS) and Chinese version of Buss&Perry aggression questionnaire (AQ-CV) on 950 college students. And mediating effect test and Bootstrap analysis are applied. The analyses yielded the following findings. (1) Physical activity is significantly negatively correlated with aggressive behavior and self-control (r=-0.18, 0.24; P＜0.01) and self-control is positively correlated with aggressive behavior (r=-0.47; P＜0.01). (2) Physical activity not only negatively predicts college students' aggressive behavior (B=-0.08; P&lt;0.01), but also positively predicts self-control (B=0.24; P&lt;0.01) Self-control negatively predicts college students' aggressive behavior (B=-0.52; P&lt;0.01). Self-control plays the mediating role in the relationship between physical activity and aggressive behavior among college students, with the ratio of 60.29%. It is concluded that physical activity can not only directly improve the problem of aggressive behavior among college students, but also indirectly improve it through self-control.
DOI: 10.5066/p9wc8rkf
title: Digital database of the previously published geologic map of the greater Denver area, Front Range Urban Corridor, Colorado

description: This digital map shows the areal extent of surficial deposits and rock stratigraphic units (formations) as compiled by Trimble and Machette from 1973 to 1977 and published in 1979 under the Front Range Urban Corridor Geology Program. Trimble and Machette compiled their geologic map from published geologic maps and unpublished geologic mapping having varied map unit schemes. A convenient feature of the compiled map is its uniform classification of geologic units that mostly matches those of companion maps to the north (USGS I-855-G) and to the south (USGS I-857-F). Published as a color paper map, the Trimble and Machette map was intended for land-use planning in the Front Range Urban Corridor. This map recently (1997-1999) was digitized under the USGS Front Range Infrastructure Resources Project. In general, the mountainous areas in the western part of the map exhibit various igneous and metamorphic bedrock units of Precambrian age, major faults, and fault brecciation zones at the east margin (5-20 km wide) of the Front Range. The eastern and central parts of the map (Colorado Piedmont) depict a mantle of unconsolidated deposits of Quaternary age and interspersed outcroppings of Cretaceous or Tertiary-Cretaceous sedimentary bedrock. The Quaternary mantle comprises eolian deposits (quartz sand and silt), alluvium (gravel, sand, and silt of variable composition), colluvium, and a few landslides. At the mountain front, north-trending, dipping Paleozoic and Mesozoic sandstone, shale, and limestone bedrock formations form hogbacks and intervening valleys.
DOI: 10.34740/kaggle/dsv/6100230
title: Leveraging Data Analytics and AI in Auditing