cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15011122
title: Surface water data: Supplementary Dataset used in: Reinken et al.: Stochastic Modelling of Thermokarst Lakes: Size Distributions and Dynamic Regimes

description: Short Description

This dataset contains surface water polygons for UTM Zone54 (~138-144°E, 55-76.3°N) based on Nitze et al., (2017, 2018) in GeoPackage format (gpkg). Furthermore it also contains annual surface water area for each polygon using the JRC Surface annual surface water dataset v1.4 (Pekel et al, 2016) in netCDF format (nc). Both datasets (vector + netcdf) can be joined with the id_geohash field, which is unique for each feature.

This is an intermediary dataset of a larger effort to create a panarctic lake change dataset.

Files

lakes_reinken_etal_subsetN.gpkg



geospatial vector file

Projection: EPSG:4326

unique id: id_geohash

attributes



several attributes about long term lake change and geometry




lakes_reinken_etal_subsetN.nc



netCDF file

Coordinates: 



id_geohash (unique identifier to join with geospatial vector file)

date (YYYY-01-01) to indicate the surface water area in respective year and lake/feature



Data variables



area_land (land area in ha)

area_nodata (noData area in ha)

area_water_permanent (permanent water area in ha)

area_water_seasonal (seasonal water area in ha)




Usage

The files can be used with python using xarray (incl. netCDF4) for loading the netCDF file and geopandas for the GeoPackage file. The latter can be also viewed with standard GIS software, e.g. QGIS.

References

Nitze, I., Grosse, G., Jones, B., Arp, C., Ulrich, M., Fedorov, A., & Veremeeva, A. (2017). Landsat-Based Trend Analysis of Lake Dynamics across Northern Permafrost Regions. Remote Sensing, 9(7), 640. https://doi.org/10.3390/rs9070640

Nitze, I., Grosse, G., Jones, B. M., Romanovsky, V. E., & Boike, J. (2018). Remote sensing quantifies widespread abundance of permafrost region disturbances across the Arctic and Subarctic. Nature Communications, 9(1), 5423. https://doi.org/10.1038/s41467-018-07663-3

Pekel, J.-F., Cottam, A., Gorelick, N., & Belward, A. S. (2016). High-resolution mapping of global surface water and its long-term changes. Nature, 540(7633), 418–422. https://doi.org/10.1038/nature20584
DOI: 10.6084/m9.figshare.24808383.v1
title: Multiple microbial guilds mediate soil methane cycling along a wetland salinity gradient - Supplemental Tables

description: Estuarine wetlands harbor considerable carbon stocks, but rising sea levels could affect their ability to sequester soil carbon as well as their potential to emit methane (CH<sub>4</sub>). While sulfate loading from seawater intrusion may reduce CH<sub>4</sub>production due to the higher energy yield of microbial sulfate reduction, existing studies suggest other factors are likely at play. Our study of 11 wetland complexes spanning a natural salinity and productivity gradient across the San Francisco Bay and Delta found that while CH<sub>4</sub>fluxes generally declined with salinity, they were highest in oligohaline wetlands (ca. 3 ppt salinity). Methanogens and methanogenesis genes were weakly correlated with CH<sub>4</sub>fluxes, but alone did not explain the highest rates observed. Taxonomic and functional gene data suggested that other microbial guilds that influence carbon and nitrogen cycling need to be accounted for to better predict CH<sub>4</sub>fluxes at landscape scales. Higher methane production occurring near the freshwater boundary with slight salinization (and sulfate incursion) might result from increased sulfate-reducing fermenter and syntrophic populations, which can produce substrates used by methanogens. Moreover, higher salinities can solubilize ionically bound ammonium abundant in the lower salinity wetland soils examined here, which could inhibit methanotrophs and potentially contribute to greater CH<sub>4</sub> fluxes observed in oligohaline sediments.
DOI: 10.3535/4ha-zlc-zzn
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.15158037.v5
title: Supplementary Data File 7

description: Essential Gene Compound Sensitivity Predictions. Essential yeast gene compound sensitivity predictions for 50 selected compounds using BIONIC.<br>
DOI: 10.3535/fsf-cx1-hzj
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rv1-xgt-8bv
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wmw-3ec-f1r
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.8252195.v1
title: Additional file 3: of Microbiomes of stony and soft deep-sea corals share rare core bacteria

description: Non-rarefied OTU table. List of OTUs organized by sample and coral host. Includes OTU abundance per sample, reference sequence for each OTU, and the taxonomy. (XLSX 985â kb)
DOI: 10.3535/cz9-j29-xyv
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q20-fmm-wp8
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2zp-fl8-z3r
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jy1-v8p-fg3
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n7y-g18-dle
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tep-9n6-3pv
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z83-6t7-5by
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27609486.v1
title: Management practices and farm-level Risk Factors Associated with Lameness in Dairy Cattle Herds in Egypt

description: Data and R codes for a paper that investigated management practices and farm-level risk factors for lameness in 55 dairy cattle herds in Egypt
DOI: 10.6084/m9.figshare.28551389.v1
title: S3 Table. compressive strength of corn cobs at different temperatures at 50 min heating treatment time

description: Compressive strength of corn cobs at different temperatures at 50 min heating treatment time
DOI: 10.3535/5gx-rsr-kwz
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xzf-mgj-8bz
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/d3r-xb8-ltp
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xfc-q1w-lwg
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/638-1hp-t2z
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/eh8-91c-2rf
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/a04-fl6-cf0
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pgh-ecw-wq0
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3pp-ebe-498
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/62w-rw5-7gw
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9s5-53p-7s7
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qde-j1y-0r1
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tsf-nt7-r22
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xy2-9c6-ht9
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.4121/uuid:6c42843c-6b07-4255-ad0f-7f6d8a994251
title: Influence of body weight unloading on human gait characteristics: a systematic review

description: This dataset concerns a meta-analysis of the existing literature on the influence of body weight support systems on human gait. It is in the form of five Matlab files, one dealing with an overview of BWS studies and each of the other four dealing with a set of gait parameters. These files contain the data used in the paper. and were used to generate the plots and calculate the root mean square error values. A 'readme' PDF file is included for more details.
DOI: 10.3535/cwe-prv-lns
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n5t-570-rkj
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lmf-gns-hec
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ly8-92q-xnb
title: Melanoskleritoitidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21981731.v1
title: UAV derived orthomosaics and digital elevation models of drained ice-dammed lake basin topography and ice margin, Russell Glacier, West Greenland, 3-6 Sept. 2021

description: The data contains two high-resolution, UAV derived orthomosaics and digital elevation models of the drained ice-dammed lake basin topography and ice margin at Russell Glacier, West Greenland surveyed on the 3rd and 6th September 2021. The UAV flights were conducted on two different dates using two different UAVs, due to the battery capacity and weather conditions.<br> The ice margin (Mission I) was surveyed on the 3/9-2021 using a Fixed-wing, WingtraOne w. multi-frequency L1/L2 GNSS receiver. <br> The drained lake basin topography (Mission II) was surveyed on the 6/9-2021 using a Quadcopter, DJI Phantom 4 Pro w. a KlauPPK 7700C GNSS receiver. <br> The UAV images were processed using a structure-from-motion (SfM) workflow in Agisoft Metashape Pro. (v. 1.7.4). <br> DEMs and orthomosaics for Mission I have a resolutions of 0.1 and 0.04 m, respectively, while for Mission II both have a resolution of 0.1 m<br> The estimated uncertainty of the DEMs are X = -0.43 m, Y = 0.11 m and Z = 0.53 m.<br> For a full description of the data processing see: https://doi.org/10.5194/egusphere-2022-566
DOI: 10.3535/8z3-v79-r44
title: Verdelite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zm9-kb2-lpf
title: Verdelite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/96d-fat-eky
title: Rapakivi granite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17633/rd.brunel.6194483.v1
title: On Gc, Jc and the characterisation of the mode-I fracture resistance in delamination or adhesive debonding dataset

description: This fileset contains data from the article: L. Škec, G. Alfano and G. Jelenić "On Gc, Jc and the characterisation of the mode-I fracture resistance in delamination or adhesive debonding", International Journal of Solids and Structures. In press, 2018.<br>
DOI: 10.3535/jcg-h2f-c81
title: Rapakivi granite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/k9q-apw-399
title: Rapakivi granite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12788803.v1
title: Additional file 1 of The chromosome-level wintersweet (Chimonanthus praecox) genome provides insights into floral scent biosynthesis and flowering in winter

description: Additional file 1: Table S1. Summary of sequencing data of Chimonanthus praecox and Calycanthus chinensis genome. Table S2. Estimation of genome size of Chimonanthus praecox and Calycanthus chinensis using K-mer analysis. Table S3. Statistic of Chimonanthus praecox and Calycanthus chinensis genome assembly. Table S4. Chromosomes length of wintersweet using HiC reads. Table S5. Assembly results of wintersweet using Hi-C. Table S6. Validation of genome assembly using BUSCO and CEGMA method. Table S7. Statistics of predicted protein-coding genes in Chimonanthus praecox and Calycanthus chinensis genome. Table S8. Functional annotation of the wintersweet protein-coding genes. Table S9. Annotation of conserved non-coding RNA genes in the wintersweet genome. Table S10. Wintersweet-specific gene families. Table S11. The list of expansion genes in wintersweet genome. Table S12. Annotation of repeat sequences in the wintersweet genome. Table S13. List of flowering-time and floral organ identity gene candidates in wintersweet. Table S14. The upregulated expressed genes involved in flowering networks in FBS1 stage compared with FBS2 stage. Table S15. Monthly temperatures in Wuhan (March 2017–February 2018). Table S16. Differently expressed genes between FBS6 and FBS7 stage. Table S17. List of Heat stress transcription factors (Hsf) and DEHYDRATION- RESPONSIVE ELEMENT BINDING PROTEIN (DREB) gene candidates identified in the wintersweet genome. Table S18.The candidate genes involved in the terpene synthesis pathways in wintersweet. Table S19. Terpene synthase family in wintersweet. Table S20. The candidate genes involved in the benzenoid/ phenylpropanoid synthesis pathways in wintersweet. Table S21. The list of transcription factor candidates involved in the regulation of VOCs synthesis in wintersweet. Table S22. Primers for CpTPS genes coloning and MADS-box B&C class genes Real-Time PCR. Table S23. Transporter candidates involved in benzenoid/phenylpropanoid synthesis pathways in wintersweet genome. Table S24. Tandem duplicated gene clusters in wintersweet genome.
DOI: 10.3535/n7n-msm-h2d
title: Rapakivi granite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s83-zf4-w8k
title: Verdelite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3bc-b69-bre
title: Rapakivi granite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/k7k-5x8-rjf
title: Rapakivi granite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/c5k-l25-z49
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jhg-5eq-67y
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/db8-p0r-2lz
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dkn-a6c-nj8
title: Microplasma gotlandicum

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dfv-2hw-548
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xat-wra-5cb
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mzz-k02-5gz
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p1b-x5k-f83
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/0h2-3zt-mh1
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r5m-d8n-j2n
title: Graptoloidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3524846.v1
title: Appendix A. A table showing annualized changes in density and mortality rates of common tree species in four 1-ha second-growth monitoring plots from 1997–2003.

description: A table showing annualized changes in density and mortality rates of common tree species in four 1-ha second-growth monitoring plots from 1997–2003.
DOI: 10.3535/gwj-8yb-58n
title: Palaeophyllum V.P. Maslov, 1950

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3af-ppc-32c
title: Scorzalite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ys1-dyn-5a4
title: Schorlomite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4nb-ah4-6nd
title: Raite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/68p-phm-rtr
title: Augite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.17304599.v1
title: FinalAnalyses.zip

description: Meta-analysis dataset on how fluctuating temperatures effect reptile development in comparison to constant temperatures
DOI: 10.3535/jmy-f8x-jxd
title: Augite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kwq-qv4-255
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ea5-rqn-ks4
title: Graptoloidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fsb-ayd-0jx
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/af7-hy5-y1e
title: Graptoloidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pk0-9p8-8fs
title: Augite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/a54-g8k-12z
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yns-v63-3dv
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/18g-jts-8y1
title: Stellerite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/znv-lg9-50y
title: Graptoloidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5ln-dvr-ptm
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/aye-5pz-78s
title: Tellurobismuthite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qvv-kns-txf
title: Stellerite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v88-nqy-raa
title: Dictyonema

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/0nr-03e-01h
title: Scorzalite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v89-e05-sfw
title: Hedyphane

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4js-szj-1m6
title: Graptoloidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/anr-afb-nhs
title: Didymograptus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1593111.v1
title: effect of sunlight exposure and crowding level on moss growth

description: The experiment was conducted in York university woodlot area. The experiment was divided into two weeks with a 100 replicates as the dataset. The group members, Ghamsayani, Mary, Shaneil and Prachi laid out transects at 25m starting from the edge of the woodlot for week 1. A 1m x1m quadrant was placed every 5 m on the transects. Within the quadrant, firstly, presence or absence of moss was determined by moving the leaf litter around, uncovering moss patches and recording thepercentage of abundance of moss cover in the 1mx1m quadrant. Presence of moss is categorical data while percentage of moss cover was recorded as continuous data. After recording the abundance of moss cover, the amount of leaf litter and other plants present around the moss were determined as the level of crowding which is categorical data. The scale for measuring the crowding level was from 1-3, where 1 was the lack or very little leaf litter and other plants around the moss patches and 3 was where the moss was covered with leaf litter and other plants in the surroundings. Another factor determined was the percentage of sunlight exposure which was continuous data. This was determined by making a square with the index finger and thumb of both hands and determining the amount of sunlight visible through the leaf canopy. The weather on the first week of the experiment was 15 degrees. The ground was cool to touch, the skies were clear and birds were chirping at a distance. There was presence of human activity in the woodlot. The experimental design was repeated the second week with firstly laying down the transact at 25m by each group member named above and using the 1mx1m quadrants to determine the presence or absence of moss, abundance of moss coverage in the 1mx1m quadrant and crowding level if leaf litter and other plants within the quadrant as well as the percentage of sun exposure using hand squares. The weather on the second week was 14 degrees and the ground was cool to touch. It was humid but with clear skies and birds chirping at a distance. Also human activity was present.
DOI: 10.3535/0gw-vms-1dd
title: Placodermi

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/j5d-kq6-lth
title: Placodermi

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/h3e-m3q-vwz
title: Tityosteus sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/h6w-prh-e2g
title: Buchanosteidae gen. n.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/1m8-4eb-6j5
title: Ptyctodontida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ve2-0zl-b1j
title: Buchanosteidae gen. n.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4pp-gnm-emc
title: Placodermi

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ztm-e9e-f35
title: Ptyctodontida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.