cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25402/epi.14540160
title: Supplementary Table 1. Statin therapy is associated with epigenetic modifications in individuals with type 2 diabetes

description: ABSTRACT
 
 




Aim: Statins lower cholesterol and reduce the
risk of cardiovascular disease. However, the exact mechanisms of statins remain
unknown. We investigated whether statin therapy associate with epigenetics in
type 2 diabetes (T2D) patients. Material & Methods: DNA methylation was
analysed in blood from newly diagnosed T2D patients from ANDIS and in a
replication cohort (ANDiU). Results: 79 sites were differentially methylated
between cases on statins and controls (FDR&lt;5%) in ANDIS. These include
previously statin-associated methylation sites annotated to DHCR24
(cg17901584), ABCG1 (cg27243685), and SC4MOL (cg05119988). Differential
methylation of two sites related to cholesterol biosynthesis and immune
response, cg17901584 (DHCR24) and cg23011663 (ARIH2), were replicated in ANDiU.
Conclusion: Statin therapy associates with epigenetic modifications in T2D
patients.
DOI: 10.25402/epi.14540169
title: Supplementary Table 3. Statin therapy is associated with epigenetic modifications in individuals with type 2 diabetes

description: ABSTRACT
 
 




Aim: Statins lower cholesterol and reduce the
risk of cardiovascular disease. However, the exact mechanisms of statins remain
unknown. We investigated whether statin therapy associate with epigenetics in
type 2 diabetes (T2D) patients. Material & Methods: DNA methylation was
analysed in blood from newly diagnosed T2D patients from ANDIS and in a
replication cohort (ANDiU). Results: 79 sites were differentially methylated
between cases on statins and controls (FDR&lt;5%) in ANDIS. These include
previously statin-associated methylation sites annotated to DHCR24
(cg17901584), ABCG1 (cg27243685), and SC4MOL (cg05119988). Differential
methylation of two sites related to cholesterol biosynthesis and immune
response, cg17901584 (DHCR24) and cg23011663 (ARIH2), were replicated in ANDiU.
Conclusion: Statin therapy associates with epigenetic modifications in T2D
patients.
DOI: 10.25402/epi.14626032
title: Supplementary File 3. Early life stress induces genome-wide sex-dependent miRNA expression and correlation across limbic brain areas in rats

description: Aims: The aim of this
 study was to assess regional- and sex-dependent changes in miRNA expression
 resulting from early-life stress (ELS). 
 Materials and
 Methods: Small RNA sequencing was used to determine sex-dependent changes in
 microRNAs after maternal separation (MS), a rodent model of ELS, across
 prefrontal cortex (PFC), amygdala, and hippocampus. 
 Results: Results
 showed that MS induced anhedonia and altered microRNA expression in a
 sex-dependent manner, particularly in PFC and hippocampus. Gene ontology
 revealed that these microRNAs target genes with brain-specific biological
 functions. 
 
 
Conclusions: Using a network approach to explore
microRNA signaling across the brain after ELS, regional differences were
highlighted as key to studying the brain’s stress response, which indicates
that sex is critical for understanding microRNA-mediated ELS-induced behavior.
DOI: 10.25403/upresearchdata.25562598.v1
title: Burned-area from Landsat 5 TM multi-date imagery during the burning season of year 2007 across the different biomes in South Africa

description: Biomass burning in Southern Africa has brought significant challenges to the research society as a fundamental driver of climate and land cover changes. Burned area mapping approaches have been developed that generate large-scale low and moderate resolution products made with different satellite data. This consequently afford the remote sensing community a unique opportunity to support their potential applications in e.g., examining the impact of fire on natural resources, estimating the quantities of burned biomass and gas emissions. Generally, the satellite-derived burned area products produced with dissimilar algorithms provide mapped burned areas at different levels of accuracy, as the environmental and remote sensing factors vary both spatially and temporally.
<br>
This study focused on the inter-comparison and accuracy evaluation of the 500-meter Moderate Resolution Imaging Spectroradiometer (MODIS) burned area product (MCD45A1) and the Backup MODIS burned area product (hereafter BMBAP) across the main-fire prone South African biomes using reference data independently-derived from multi-temporal 30-meter Landsat 5 Thematic Mapper (TM) imagery distributed over six validation sites. The accuracy of the products was quantified using confusion matrices, linear regression and subpixel burned area measures. The results revealed that the highest burned area mapping accuracies were reported in the fynbos and grassland biomes by the MCD45A1 product, following the BMBAP product across the pine forest and savanna biomes, respectively. Further, the MCD45A1 product presented higher subpixel detection probabilities for the burned area fractions &lt;= 50% than the BMBAP product, which appeared more reliable in detecting burned area fractions &gt; 50% of a MODIS pixel. Finally, the results demonstrated that the probability of identifying a burned area within a MODIS pixel is directly related to the proportion of the MODIS pixel burned and thus, highlights the relevance of fractional burned area during classification accuracy assessment of lower resolution remotely-sensed products using data with higher spatial resolution.
DOI: 10.25403/upresearchdata.25562598
title: Burned-area from Landsat 5 TM multi-date imagery during the burning season of year 2007 across the different biomes in South Africa

description: Biomass burning in Southern Africa has brought significant challenges to the research society as a fundamental driver of climate and land cover changes. Burned area mapping approaches have been developed that generate large-scale low and moderate resolution products made with different satellite data. This consequently afford the remote sensing community a unique opportunity to support their potential applications in e.g., examining the impact of fire on natural resources, estimating the quantities of burned biomass and gas emissions. Generally, the satellite-derived burned area products produced with dissimilar algorithms provide mapped burned areas at different levels of accuracy, as the environmental and remote sensing factors vary both spatially and temporally.
<br>
This study focused on the inter-comparison and accuracy evaluation of the 500-meter Moderate Resolution Imaging Spectroradiometer (MODIS) burned area product (MCD45A1) and the Backup MODIS burned area product (hereafter BMBAP) across the main-fire prone South African biomes using reference data independently-derived from multi-temporal 30-meter Landsat 5 Thematic Mapper (TM) imagery distributed over six validation sites. The accuracy of the products was quantified using confusion matrices, linear regression and subpixel burned area measures. The results revealed that the highest burned area mapping accuracies were reported in the fynbos and grassland biomes by the MCD45A1 product, following the BMBAP product across the pine forest and savanna biomes, respectively. Further, the MCD45A1 product presented higher subpixel detection probabilities for the burned area fractions &lt;= 50% than the BMBAP product, which appeared more reliable in detecting burned area fractions &gt; 50% of a MODIS pixel. Finally, the results demonstrated that the probability of identifying a burned area within a MODIS pixel is directly related to the proportion of the MODIS pixel burned and thus, highlights the relevance of fractional burned area during classification accuracy assessment of lower resolution remotely-sensed products using data with higher spatial resolution.
DOI: 10.25402/epi.16699405.v1
title: EPI-2021-0192 Supplementary File

description: <b>Table S1.</b> Latent Class Trajectory Model Output for Perceived Stress Scores and
Depression Symptom Scores among pregnant women of the Fetal Growth Studies

<b>Table S2.</b> Sensitivity analysis of top significant placental
CpGs at delivery associated with antenatal <b>Table S3.</b> Enriched networks of nearest genes
of top 100 CpGs associated with depression at baseline visit<b>Table S4.</b> Enriched networks of nearest genes
of top 100 CpGs associated with depression during visit 1

<b>Table S5.</b> Enriched networks of nearest genes
of top 100 CpGs associated with depression during visit 2

<b>Table S6</b>. Enriched networks of nearest
genes of top 100 CpGs associated with depression during visit 3

<b>Table S7</b>. Enriched networks of nearest
genes of top 100 CpGs associated with depression during visit 4

<b>Table S8.</b> Enriched networks of nearest genes
of top 100 CpGs associated with depression during visit 5


 
 
 <b>Table S9.</b> Enriched networks of nearest
 genes of top 100 CpGs associated with perceived stress during baseline visit
 <b>Table S10.</b> Enriched networks of nearest
 genes of top 100 CpGs associated with perceived stress during visit 1
 <b>Table S11.</b> Enriched networks of nearest
 genes of top 100 CpGs associated with perceived stress during visit 2
 <b>Table S12.</b> Enriched networks of nearest
 genes of top 100 CpGs associated with perceived stress during visit 3
 <b>Table S13.</b> Enriched networks of nearest
 genes of top 100 CpGs associated with perceived stress during visit 4
 <b>Table S14.</b> Enriched networks of nearest
 genes of top 100 CpGs associated with perceived stress during visit 5


 
 
 <b>Figure S1</b>. Inflation corrected Q-Q plots for
 EWAS of depression during pregnancy at six assessment time-points.
 <b>Figure S2</b>. Inflation corrected Q-Q plots for
 EWAS of perceived stress during pregnancy at six assessment time-points.
 <b>Figure S3.</b> Manhattan plots showing the
 distribution of placental CpGs and their association with class trajectories
 of maternal depression and perceived stress with the BACON adjusted lambda
 values<b>Figure
S4.</b> Expression
levels in various tissues of selected genes annotated to depression-associated
CpGs in placenta [proteinatlas.org]
DOI: 10.25402/epi.19290170.v1
title: Prenatal NeuN+ neurons of Down Syndrome display aberrant integrative DNA methylation and gene expression profiles. Supplementary data

description: Supplementary File
 1: DS patient and control inclusion
 using QF-PCR analysis
 Suplementary table 1: Analyses
 Supplementary table 2: Analyses descriptions
DOI: 10.25402/epi.19354280.v1
title: Advanced glycation end products alter the m6A-modified RNA profiles in human dermal fibroblasts. Supplementary tables

description: Supplementary Table
 1: Primers used in this study.
 
 




Supplementary Table 2 more details of
significantly m6A-modified mRNA and LncRNA.
DOI: 10.15468/dl.gjuwam
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Glabropilumnus laevis (Dana, 1852)"
 ]
}

 The dataset includes 20 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019870-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d76aw8
title: Occurrence Download

description: A dataset containing 22634 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scaptotrigona Moure, 1942"
 ]
}

 The dataset includes 22634 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019869-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xmy2bu
title: Occurrence Download

description: A dataset containing 3608 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is India",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Panthera tigris (Linnaeus, 1758)",
 "Year 1990-2024"
 ]
}

 The dataset includes 3608 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019871-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wmwtnt
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "GadmGid is ESP.4_1",
 "Geometry POLYGON((-14.14995 37.13691,10.14995 37.13691,10.14995 46.86309,-14.14995 46.86309,-14.14995 37.13691))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Juncus balticus subsp. pyrenaeus (Timb.-Lagr. & Jeanb.) P.Fourn."
 ]
}

 The dataset includes 31 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019872-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z3k5kv
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pilumnus laevis Dana, 1852"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019873-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/8439180
title: ⏳ endoflife.date database (duckdb)
DOI: 10.4228/zalf-jddd-7k70
title: Farming Systems for Kenya: Irrigated vs. Rainfed Cropland

description: <p>This product shows the distribution of rainfed and irrigated agricultural land across Kenya. This dataset has been produced using a large training dataset that contains a total area of 71,900 km² in training samples. The algorithm in the product used three years of Sentinel-2 data (2021-2023). Harmonics of NDVI were used to overcome the limitations of data gaps due to clouds and noise in the time series. The harmonics of the NDVI were then used along with averaged evapotranspiration (ET) and land surface temperature data from MODIS to feed a random forest classifier to produce the final product, along with several post-processing steps to smooth the dataset. The product can provide meaningful insights into areas in need of intervention due to climatic stress and areas within proximity to alternative water sources to assist in irrigation decision making.</p>
<br/>
NOTE: For technical reasons please click csv download and internally a zip File with the GeoTIFF will be set up and be available under your downloadlink.
DOI: 10.15468/dl.w5cf9r
title: Occurrence Download

description: A dataset containing 184 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thalamita poissonii (Audouin, 1826)"
 ]
}

 The dataset includes 184 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019874-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25402/epi.20973961.v1
title: Multi-omics analysis identifies key genes and pathways related to N6-methyladenosine RNA modification in ovarian cancer. Supplementary table 1.

description: Supplementary table 1
DOI: 10.15468/dl.w5rxqd
title: Occurrence Download

description: A dataset containing 115525 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Spirodela polyrhiza (L.) Schleid.)"
 ]
}

 The dataset includes 115525 records from 994 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019867-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uv33sg
title: Occurrence Download

description: A dataset containing 3464 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is International Barcode of Life project (iBOL)",
 "Country is Belgium"
 ]
}

 The dataset includes 3464 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022930-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k7hr8v
title: Occurrence Download

description: A dataset containing 8546 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is INSDC Sequences",
 "Country is Belgium"
 ]
}

 The dataset includes 8546 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022929-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f3s676
title: Occurrence Download

description: A dataset containing 33236 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ophiogomphus cecilia (Fourcroy, 1785), Triturus cristatus (Laurenti, 1768), Scolopax rusticola Linnaeus, 1758, Rana arvalis Nilsson, 1842, Hyla arborea (Linnaeus, 1758), Lutra lutra (Linnaeus, 1758), Pelobates fuscus (Laurenti, 1768), Dryobates minor (Linnaeus, 1758))",
 "Year is not null",
 "Year is one of (2020, 2021, 2022, 2023, 2024)",
 "HasCoordinate is TRUE",
 "DecimalLatitude is greater than or equal to 50.57331501591691",
 "DecimalLatitude is less than or equal to 55.05737499791894",
 "DecimalLongitude is greater than or equal to 5.865999",
 "DecimalLongitude is less than or equal to 11.412317117646339",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 33236 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022928-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.23719/1532161
title: High-Resolution (1 Meter) Land Cover for Portions of U.S. Environmental Protection Agency (EPA) Region 3 Outside of the Chesapeake Bay Watershed, in West Virginia (2020), Virginia (2021), and Pennsylvania (2022)

description: This map shows high-resolution (1 meter) land cover in the EPA Region 3, covering the parts of West Virginia, Virginia, and Pennsylvania outside of the Chesapeake Bay Watershed. It contains the following classes: Water, Tree Canopy, Scrub\Shrub, Low Vegetation, Barren, Impervious Structures, Other Impervious, Impervious Roads, Tree Canopy Over Impervious Structures, Tree Canopy Over Other Impervious, and Tree Canopy Over Impervious Roads. Using object-based image analysis mapping techniques, it was mapped from a combination of remote-sensing imagery and GIS datasets, including LiDAR, multispectral imagery, and thematic layers (e.g., roads, building footprints). Draft output was then manually reviewed and edited to eliminate obvious errors of omission and commission. The classification scheme closely follows a similar mapping effort for the Chesapeake Bay Watershed; together, maps from the two projects cover the entirety of the EPA Region 3 states. One difference between the projects, however, is that tidal wetlands were mapped in the Chesapeake Bay effort, included as the class Emergent Wetlands, but not in the EPA Region 3 zones outside of the watershed. The map is considered current as of 2020 for West Virginia, 2021 for Virginia, and 2022 for Pennsylvania.
DOI: 10.15468/dl.guzvkz
title: Occurrence Download

description: A dataset containing 2890 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Lyman Entomological Museum (LEMQ)",
 "Country is Belgium"
 ]
}

 The dataset includes 2890 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022931-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.73u7jk
title: Occurrence Download

description: A dataset containing 30961 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jabiru mycteria (Lichtenstein, 1819)"
 ]
}

 The dataset includes 30961 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0357066-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-32753
title: Minute book no. 2, PMU, 1917-1922

description: [description english/roman)] Pentecostal Missionary Union [PMU] minute book No. 2 including 30 pages of subject index; 515 pages of council meeting minutes; 17 blank pages at end of minute book.
DOI: 10.15468/dl.kt9726
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sarcoglyphis thailandica Seidenf."
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0114351-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tegjvg
title: Occurrence Download

description: A dataset containing 3926 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Entoloma rusticoides (Gillet) Noordel., Entoloma saundersii (Fr.) Sacc., Entoloma striatum Hesler, Entoloma serrulatum (Fr.) Hesler)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 3926 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0357087-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w7gy4u
title: Occurrence Download

description: A dataset containing 797 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Celypha cespitana (Hübner, 1814-1817)",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 {
 "or" : [
 "Country is United States of America",
 "Country is United States",
 "Country is United States of America",
 "Country is Canada",
 "Continent is North America"
 ]
 }
 ]
}

 The dataset includes 797 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0132330-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.