cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1171205.v3
title: Essure Database - Search Date: September 16, 2014.xlsx

description: <strong>Essure: database of biomedical studies</strong> - New versions of this database will be uploaded in the future. - History of changes will be available in this figshare article. <strong>- Version 1. September 16, 2014.</strong><br>Original data values downloaded from ClinicalTrials.gov and PubMed - Google Drive Spreadsheet is open (worldwide) & comments are also allowed (1st URL). - This archive is open, transparent, and complies with terms of service of websites in which data were originally downloaded. In addition, verification of future analysis posted in this figshare article could be done by anyone because these data was collected from publicly available databases. -- <strong>Dec 29, 2014 - Update</strong> 1. Evidence does not support Bayer statements:<br>The use of Essure as a safe contraceptive method in women is highly questionable. 2. Bayer is withholding Essure safety data. 3. Agencies from several countries (e.g., FDA and INVIMA) acted as facilitators (not regulators): their actions accelerated the entry of Essure into the market. 4. Regulators are also withholding information involving the market approval of Essure. 5. Let's be straight up about the Essure case -- no need to be over-polite here --<br>This discussion is about pharmaceutical crimes committed against thousands of women. These criminal actions were only possible by the complicities of others (e.g., drug regulators and author's of hidden clinical studies). - I have evidence to support the above statements. - Thousands of women have reported serious adverse events after receiving the Essure placement procedure. - Bayer responses to these women are disrespectful, offensive, and shameful. I am here to say that these women are real cases of serious adverse events associated with Essure: - More than one paper will be submitted to peer-review medical journals. - More than one post about Essure will be published in this blog (additional to journal articles). - This is evidence of misleading advertising:<br>http://gilmedica.com/nuestros-productos/quirurgica/pelvis-femenina-2/essure/ Notes:<br>- Please take a look to other types of medical devices advertised by the company promoting the use of Essure in Colombia.<br>-The geographical location of Gilmedica is very close to my home.
DOI: 10.6084/m9.figshare.22249291.v1
title: Training Data.zip

description: Nuclei segmentation data sets with complete nuclei annotation of Prostate Cancer.
DOI: 10.6084/m9.figshare.26044039.v1
title: Paired scRNA-seq and scTCR/BCR-seq for HNSCC

description: MACS targeting CD45<sup>+</sup> cells in HNSCC, followed by paired scRNA-seq and scTCR/BCR-seq
DOI: 10.6084/m9.figshare.27101155.v1
title: Teacher Humor is a feature of instructional quality

description: We studied teacher humor as a feature of instructional quality in high schools.
DOI: 10.6084/m9.figshare.5241664.v1
title: Erratum: FIP200 is Involved in Murine <b><i>Pseudomonas</i></b> Infection by Regulating HMGB1 Intracellular Translocation

description: <b><i>Background: </i></b>FIP200, a critical autophagy initiating protein, can participate in numerous cellular functions including cancer development; however, its functional role in <i>P. aeruginosa</i> infection of alveolar macrophages is unknown. <b><i>Methods: </i></b>To investigate the role of FIP200 in host defense, we transfected murine alveolar macrophage MH-S cells with FIP200 siRNA. Having confirmed that FIP200 knockdown inhibited PAO1-induced autophagosme formation, we sought to characterize the underlying signaling pathways by immunoblotting. Further, we used <i>fip200</i> KO mice to study the effects of <i>fip200</i> deficiency on HMGB1 translocation. <b><i>Results: </i></b>We showed that <i>Pseudomonas</i> PAO1 strain infection facilitated autophagosome formation, whereas knockdown of FIP200 inhibited autophagosome formation and HMGB1 expression in MH-S cells. Silencing FIP200 impaired the translocation of HMGB1 to cytosol of MH-S cells and almost abolished acetylation of HMGB1 during PAO1 infection. In contrast, FIP200 overexpression facilitated the cytosol translocation of HMGB1 from nuclei and increased acetylation of HMGB1 in PAO1-infected MH-S cells. Importantly, expression and acetylation of HMGB1 were also significantly down-regulated in <i>fip200</i> KO mice following PAO1 infection. <b><i>Conclusions: </i></b>Collectively, these findings elucidate that FIP200 may regulate expression and translocation of HMGB1 during PAO1 infection, which may indicate novel therapeutic targets to control pulmonary infection.
DOI: 10.6084/m9.figshare.20510508.v1
title: Adoption of new technologies in pre-service teachers. The case of interaction-enhancing videos. In Teaching and Teacher Education.

description: The attachments refer to the article "Adoption of new technologies in pre-service teachers. The case of interaction-enhancing videos<b><i>.</i></b>".There are five files:a) the questionnaire used for data collectionb) the data collected / datasetc) an example of an impulse video with teaching materiald) the grid used during the seminar to evaluate the impulse videose) the DigiKompP descriptor used in the analysis
DOI: 10.6084/m9.figshare.26019481.v2
title: <i>S. album</i> assembly and annotation

description: <i>S. album</i> assembly and annotation
DOI: 10.6084/m9.figshare.13554452.v1
title: Food Taboos in Kenya are Hampering Dietary Diversification

description: <b>Background </b> Diets in Kenya are hardly diversified due to many individual and environmental factors that influence eating behaviour. Determinants of Kenyan healthy eating are, however, complex and require to be analysed using a behavioural theory. <b>Methods </b> Focus Groups Discussions (15 in total) in a double-layer design were conducted comprising adult men and women from 5 villages of Vihiga County. Questions explored knowledge, barriers and cues to action towards eating a diet containing a wide variety of foods. <b>Results and Discussion </b> We found that healthy eating concepts are recalled, however, several taboos restricting foods are limiting the quality of the local diet in terms of diversity. Nutrition education is a cue to action. <b>Conclusions </b> We identified several individual and environmental determinants of eating behaviour in the studied communities. Public health interventions should focus on supporting healthy eating behaviours and educating the community about the negative health effects of some taboos. <b>Keywords</b> Eating, Restrictions, Food Taboos, Africa
DOI: 10.6084/m9.figshare.13634945.v1
title: HFMDdata.csv

description: There are 16 columns in the current data set, including geographic codes, projection coordinates, latitude and longitude coordinates, time, the climatic data, consisting of the monthly average temperature (AT), relative humidity (RH), air pressure (AP), wind speed (AW) and monthly total precipitation (TP), hand, foot, and mouth disease cases, population sizes of children under 9 years old, the adjusted cumulative incidence (CI) values and their natural logarithm.
DOI: 10.6084/m9.figshare.25763283.v1
title: metabolome_LC-BasicScan.xlsx

description: Liquid chromatography combined with combined with time-of-flight mass spectrometry (LC-TOFMS) measurements were used to generate metabolomics data, which were analyzed using MetaboAnalyst. Of the 115 metabolites identified.
DOI: 10.6084/m9.figshare.4483820.v1
title: Supplementary Material for: The HDM2 (MDM2) Inhibitor NVP-CGM097 Inhibits Tumor Cell Proliferation and Shows Additive Effects with 5-Fluorouracil on the p53-p21-Rb-E2F1 Cascade in the p53wild type Neuroendocrine Tumor Cell Line GOT1

description: <b><i>Background/Aims:</i></b> The tumor suppressor p53 is depleted in many tumor cells by the E3 ubiquitin ligase mouse double minute 2 homolog (MDM2) through MDM2/p53 interaction. A novel target for inhibiting p53 degradation and for causing reexpression of p53<sup>wild type</sup> is inhibition of MDM2. The small molecule NVP-CGM097 is a novel MDM2 inhibitor. We investigated MDM2 inhibition as a target in neuroendocrine tumor cells in vitro. <b><i>Methods:</i></b> Human neuroendocrine tumor cell lines from the pancreas (BON1), lung (NCI-H727), and midgut (GOT1) were incubated with the MDM2 inhibitor NVP-CGM097 (Novartis) at concentrations from 4 to 2,500 nM. <b><i>Results:</i></b> While p53<sup>wild type</sup> GOT1 cells were sensitive to NVP-CGM097, p53<sup>mutated</sup> BON1 and p53<sup>mutated</sup> NCI-H727 cells were resistant to NVP-CGM097. Incubation of GOT1 cells with NVP-CGM097 at 100, 500, and 2,500 nM for 96 h caused a significant decline in cell viability to 84.9 ± 9.2% (<i>p</i> &lt; 0.05), 77.4 ± 6.6% (<i>p</i> &lt; 0.01), and 47.7 ± 9.2% (<i>p</i> &lt; 0.01). In a Western blot analysis of GOT1 cells, NVP-CGM097 caused a dose-dependent increase in the expression of p53 and p21 tumor suppressor proteins and a decrease in phospho-Rb and E2F1. Experiments of co-incubation of NVP-CGM097 with 5-fluorouracil, temozolomide, or everolimus each showed additive antiproliferative effects in GOT1 cells. NVP-CGM097 and 5-fluorouracil increased p53 and p21 expression in an additive manner. <b><i>Conclusions:</i></b> MDM2 inhibition seems a promising novel therapeutic target in neuroendocrine tumors harboring p53<sup>wild type</sup>. Further investigations should examine the potential role of MDM2 inhibitors in neuroendocrine tumor treatment.
DOI: 10.6084/m9.figshare.22359987.v1
title: Improved electro-optical and dielectric properties of polymer dispersed liquid crystal doped with disperse dye red 1 and carbon nanoparticles

description: Disperse dye red 1 (DR1) and carbon nanoparticles (CNPs) were doped separately to form polymer dispersed liquid crystal films, namely, DPDLC & CPDLC. Nematic liquid crystal (LC) and photopolymer NOA-65 were used to prepare these composite films using polymerisation-induced phase separation (PIPS) technique. In this research work, it is demonstrated that the minute concentration (0.05% wt./wt.) of DR1 and CNPs controls the LC droplet alignment and LC droplet size in polymer dispersed liquid crystal (PDLC) film. The effect of DR1 and CNPs on PDLC film has been investigated in terms of LC droplet size, transition temperature, voltage-transmittance characteristic, contrast ratio, response time, haze, and dielectric measurements. The obtained results reveal that the threshold voltage values of the composite film get reduced from 34.87 V (undoped) to 10.19 and 9.26 V, for 0.05% of DR1 and CNPs doping, respectively. The DR1 (0.05%) doped film shows improved contrast of the undoped film as compared to CNPs (0.05%) film, whereas CNPs (0.05%) doped film shows a faster response time of 2.81 ms as compared to DR1 (0.05%) doped film (3.14 ms). Dielectric analysis of undoped, DPDLC, and CPDLC films represents Debye type relaxation mode.
DOI: 10.17632/kk5w463ch9
title: Table S5: SEM-EDS compositional data for calcite and dolomite

description: SEM-EDS data for dolomite and calcite in CM chondrites, ALH 83100, MET 01070, and ALH 84034.
DOI: 10.17632/ywd74h9wg3
title: Organic matter in the water column of the Gdańsk Basin (southern Baltic Sea) in summer 2023

description: Concentration of total dissolved carbon (TOC), chlorophyll and fluorescence was mesured in the water column of three stations located in the Gdańsk Basin (southern Baltic Sea). Samples were collected during a cruise aboard the RV Oceanograf (owned by the University of Gdańsk) from July 28 to July 31, 2023. Station depths were 52 m for MET2 and 82 m for MET1-MP and MET1-REF.
DOI: 10.21954/ou.rd.10673132.v1
title: Citation Knowledge based Dataset

description: This dataset contains information from scientific publications published by authors who have published papers in the RecSys conference. It contains four files which have information extracted from scientific publications. The details of each file is explained below :<b><br></b>i) all_authors.tsv : This file contains the details of authors who published research papers in the RecSys conference. The details include: authors' identifier in various forms, such as number, orcid id, dblp url, dblp key and google scholar url, authors' first name, last name and their affiliation (where they work)<b><br></b>ii) all_publications.tsv : This file contains the details of publications authored by the authors mentioned in the all_authors.tsv file (Please note the list of publications does not contain all the authored publications of the authors, refer to the publication for further details). The details include publications' identifier in different forms (such as number, dblp key, dblp url, dblp key, google scholar url), title, filtered title, published date, published conference and paper abstract.<b><br></b>iii) selected_author_publications-information.tsv : This file consists of identifiers of authors and their publications. Here, we provide the information of selected authors and their publications used for our experiment.<b><br></b>iv) selected_publication_citations-information.tsv : This file contains the information of the selected publications which consists of both citing and cited papers’ information used in our experiment. It consists of identifier of citing paper, identifier of cited paper, citation title, citation filtered title, the sentence before the citation is mentioned, citing sentence, the sentence after the citation is mentioned, citation position (section), and citation type (citing intention).Please note, it does not contain information of all the citations cited in the publications. For more detail, please refer to the paper.<br>If you are using this dataset, please cite our paper (Exploiting Citation Knowledge in Personalised Recommendation of Recent Scientific Publications) published in LREC2020.<br>This dataset is available for research purposes only.
DOI: 10.6084/m9.figshare.21252609.v1
title: Database_Optimal stomatal theory_Metaanalysis

description: Combined database for the meta-analysis conducted for the manuscript: Gardner et al. 2022. <em>Optimal stomatal theory predicts CO</em><sub><em>2</em></sub><em> responses of stomatal conductance in both gymnosperm and angiosperm trees. </em>
DOI: 10.6084/m9.figshare.25112972.v1
title: Data and code for: Community synchrony in seed production is associated with trait similarity and climate across North America.

description: Data and code for the manuscript titled "Community synchrony in seed production is associated with trait similarity and climate across North America".To investigate synchrony in mast seeding between woody-plant species within communities, we used long-term data from seven forest communities in the US Long-Term Ecological Research (LTER) network, ranging from tropical rainforest to taiga. We focus on cross-species synchrony to i) quantify synchrony in reproduction overall and within LTER sites, ii) test for relationships between synchrony with trait and phylogenetic similarity, and iii) investigate how climate conditions are related to levels of synchrony.These data contain the cross-species synchrony values for 2,104 co-occurring species pairs at seven LTER sites, as well as the trait similarities between species, phylogenetic similarity, and the climate conditions of the plots within the LTER sites (actual evapotranspiration, climatic water deficit). There is information on 11 traits for 103 species, plus phylogenetic similarity between species pairs.
DOI: 10.6084/m9.figshare.28733300.v1
title: Twist_EIGENSTRAT

description: This repository contains EIGENSTRAT genotype files generated in the study "Optimised in-solution enrichment of over a million ancient human SNPs" Davidson et al. 2025.Please refer to the manuscript for details.
DOI: 10.17632/6ppt8hjktd
title: Risk-Adjusted Capital Allocation and Misallocation: Replication Files

description: Replication files for Risk-Adjusted Capital Allocation and Misallocation
DOI: 10.6084/m9.figshare.19130813.v1
title: Landsat-based map of the vegetation cover of the Perm region

description: This dataset presents the first Landsat-based map of the vegetation cover for the Perm region (Russia). Initial Landsat images were obtained in 2016-2020. The map building technique is based on the supervised classification of satellite images and subsequent post-processing. This technique involves the use of a number of additional sources, in particular, long-term data on forest disturbances, as well as reforestation areas on abandoned agricultural land. Finally, a map with a spatial resolution of 30 m (which corresponds to a scale of 1:100,000) has been created. The map legend includes 19 thematic classes, 11 of them contain the information on forest vegetation. Previously compiled global Landsat-based datasets namely Global Forest Change (Hansen et al., 2013), Global Surface Water (Pekel et al., 2016) and Global cropland extent (Potapov et al., 2021) were used co identify the classes of forest loss areas, water surface and croplands.
DOI: 10.6084/m9.figshare.6137198.v1
title: American Gut Project fecal sOTU relative abundance table

description: The Deblur sOTU relative abundance table for the fecal samples used in the American Gut Project manuscript. The samples were trimmed to a common read length of 125nt, and processed by Deblur (Amir et al mSystems 2017). Blooms were removed (Amir et al mSystems 2017) and any sample with fewer than 1250 sequences was omitted. This table is not rarefied, and is normalized to 1.
DOI: 10.17632/sp3dmp9xcp
title: Rúbrica de Prácticas Directivas Esenciales (RPD-8)

description: El presente instrumento tiene como propósito autoevaluar las prácticas esenciales que deben tener los directores de escuelas acorde con las prioridades educativas y los retos de la sociedad del conocimiento.
DOI: 10.17632/zgchnmjkj7
title: Comparing two different arc welding processes through the welding energy: the complete dataset

description: This raw image data refers to the method proposed in https://rdcu.be/bIa1h (https://doi.org/10.1007/s40430-019-1804-x) for comparing between two welding processes through the statistical study of the effects that two welding energy levels have on the selected output variables of each one. A 2^2 full factorial design of experiment was applied. The process responses are one-dimensional weld bead geometry (penetration, width and reinforcement), two-dimensional weld bead geometry (penetration area and reinforcement area), dilution and weld bead microstructure. Table 3 (in https://rdcu.be/bIa1h) shows the design of experiment and those assessed weld bead microstructure in terms of percentage of the PF(G) - primary grain boundary ferrite; PF(I) - polygonal ferrite; AF - acicular ferrite; FS(NA) - nonaligned side-plate ferrite and FS(A) - aligned side-plate ferrite; all that percentage values obtained from the analysis of this dataset. The statistical analysis showed that the methodology presented is capable of determining objective parameters (statistically based) which can be useful in comparing and selecting a suitable process for a specific application. The comparison of the results between fluxed core arc welding (FCAW) and shielded metal arc welding processes reveled that both produced weld seams with the same penetration. Therefore, in this study, it was recommended the selection of the FCAW process at low energy level, which was able to produce larger width weld seams and improved microstructure quality, saving 30% of the energy consumption.
DOI: 10.6084/m9.figshare.28656941.v1
title: Foundations of a knee joint digital twin: Supplementary Information and Data

description: Accessible View of the Supplementary Information and Data from:<br>Hoyer, G., Gao, K.T., Gassert, F.G. <i>et al.</i> Foundations of a knee joint digital twin from qMRI biomarkers for osteoarthritis and knee replacement. <i>npj Digit. Med.</i> <b>8</b>, 118 (2025). https://doi.org/10.1038/s41746-025-01507-3
DOI: 10.6084/m9.figshare.15035778.v1
title: Appendix 3: Classification trees and associated bootstrapped thresholds & probabilities

description: These are the component parts of the classification trees used to drive the LFS distribution function in our model.
DOI: 10.6084/m9.figshare.1569108.v8
title: Induction of <i>VEGFA</i> mRNA translation by CoCl<sub>2</sub> mediated by HuR

description: Vascular endothelial growth factor (VEGF) A is a master regulator of neovascularization and angiogenesis. VEGFA is potently induced by hypoxia and by pathological conditions including diabetic retinopathy and tumorigenesis. Fine-tuning of VEGFA expression by different stimuli is important for maintaining tissue vascularization and organ homeostasis. Here, we tested the effect of the hypoxia mimetic cobalt chloride (CoCl<sub>2</sub>) on VEGFA expression in human cervical carcinoma HeLa cells. We found that CoCl<sub>2</sub> increased the levels of <i>VEGFA</i> mRNA and VEGFA protein without affecting <i>VEGFA</i> mRNA stability. Biotin pulldown analysis to capture the RNA-binding proteins (RBPs) bound to <i>VEGFA</i> mRNA followed by mass spectrometry analysis revealed that the RBP HuR [human antigen R, a member of the embryonic lethal abnormal vision (ELAV) family of proteins], interacts with <i>VEGFA</i> mRNA. <i>VEGFA</i> mRNA-tagging experiments showed that exposure to CoCl<sub>2</sub> increases the interaction of HuR with <i>VEGFA</i> mRNA and promoted the colocalization of HuR and the distal part of the <i>VEGFA</i> 3′-untranslated region (UTR) in the cytoplasm. We propose that under hypoxia-like conditions, HuR enhances <i>VEGFA</i> mRNA translation.
DOI: 10.6084/m9.figshare.5124211.v1
title: Supplementary Material for: Genetic and Lifestyle Causal Beliefs about Obesity and Associated Diseases among Ethnically Diverse Patients: A Structured Interview Study

description: <b><i>Background:</i></b> New genetic associations with obesity are rapidly being discovered. People's causal beliefs about obesity may influence their obesity-related behaviors. Little is known about genetic compared to lifestyle causal beliefs regarding obesity, and obesity-related diseases, among minority populations. This study examined genetic and lifestyle causal beliefs about obesity and 3 obesity-related diseases among a low-income, ethnically diverse patient sample. <b><i>Methods:</i></b> Structured interviews were conducted with patients attending an inner-city hospital outpatient clinic. Participants (n = 205) were asked how much they agreed that genetics influence the risk of obesity, type 2 diabetes, heart disease, and cancer. Similar questions were asked regarding lifestyle causal beliefs (overeating, eating certain types of food, chemicals in food, not exercising, smoking). In this study, 48% of participants were non-Hispanic Black, 29% Hispanic and 10% non-Hispanic White. <b><i>Results:</i></b> Over two-thirds (69%) of participants believed genetics cause obesity ‘some' or ‘a lot', compared to 82% for type 2 diabetes, 79% for heart disease and 75% for cancer. Participants who held genetic causal beliefs about obesity held more lifestyle causal beliefs in total than those who did not hold genetic causal beliefs about obesity (4.0 vs. 3.7 lifestyle causal beliefs, respectively, possible range 0-5, p = 0.025). There were few associations between causal beliefs and sociodemographic characteristics. <b><i>Conclusions:</i></b> Higher beliefs in genetic causation of obesity and related diseases are not automatically associated with decreased lifestyle beliefs. Future research efforts are needed to determine whether public health messages aimed at reducing obesity and its consequences in racially and ethnically diverse urban communities may benefit from incorporating an acknowledgement of the role of genetics in these conditions.
DOI: 10.6084/m9.figshare.9916733.v1
title: Gaussian Finder's cavity dataset in XML

description: Gaussian Finder's cavity dataset in XML. This dataset describes the protein cavities output by a protein cavity detection method called Gaussian Finder. This method is described in the article available at: https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-017-1913-4<br><br>