cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6267440.v2
title: Data: High Rebound Mattress Toppers Facilitate Core Body Temperature Drop and Enhance Deep Sleep in the Initial Phase of Nocturnal Sleep

description: <b>Fig 1A Data : Changes in core body temperature during sleep with HR and LR in young adult males (study I).</b><b></b><br><b>Fig 1B Data: EEG delta power changes across the night (study I)</b><b></b><br><b>Fig 2A Data: Changes in core body temperature during sleep with HR and LR in old adult males (study II). </b><b></b><br><b>Fig 2B Data: EEG delta power changes across the night (study II)</b><b></b><br><b>Fig 3 Data : Muscle activity needed to generate a rolling over motion on HR and LR mattress (Roll over evaluations)</b><b></b><br><b>S2A Fig Data: Changes in core body temperature during sleep in young (study I) and old (study II) subjects. </b><b></b><br><b>S2 B Fig Data: EEG delta power changes across the night in young (study I) and old (Study II) subjects</b><b></b><br><b>Table 1 Data: Comparisons of sleep and sleep-related parameters between HR and LR mattress topper use (study I)</b><b></b><br><b>Table 1 PVT Data</b><b></b><br><b>Table 2 stage 3 and 4 Data: Amounts of slow wave sleep and sympathetic nerve activity (LF/HF values) in each 2-hour period (study I)</b><b></b><br><b>Table 2 LF/HF Data</b><b></b><br><b>Table 3 Data: Comparisons of sleep and sleep-related parameters between HR and LR mattress topper use (study II)</b><b></b><br><b>PVT data for Table 3</b><b></b><br><b>S1 Table stage 3 and 4 Data: Amounts of slow wave sleep and sympathetic nerve activity (LF/HF values) in each 2-hour period slept with HR and LR in old subjects (study II): </b><b></b><br><b>S1 Table LH/HF data Data</b><b></b><br><b>S2 Table Data: Comparisons of sleep and sleep-related parameters between young (study I) and old (study II) subjects: </b><b></b><br><b>S2 Table PVT Table</b><b></b><br><b>S3 Table stage 3&4 Data: Amounts of slow wave sleep and sympathetic nerve activity (LF/HF values) in each 2-hour period slept in young (study I) and old (study II) subjects</b><b></b><br> <b>S3 Table LH/HF values Data</b><b><br></b>
DOI: 10.6084/m9.figshare.6267440.v1
title: Data: High Rebound Mattress Toppers Facilitate Core Body Temperature Drop and Enhance Deep Sleep in the Initial Phase of Nocturnal Sleep

description: <b>Fig 1A Data : Changes in core body temperature during sleep with HR and LR in young adult males (study I).</b><b></b><br><b>Fig 1B Data: EEG delta power changes across the night (study I)</b><b></b><br><b>Fig 2A Data: Changes in core body temperature during sleep with HR and LR in old adult males (study II). </b><b></b><br><b>Fig 2B Data: EEG delta power changes across the night (study II)</b><b></b><br><b>Fig 3 Data : Muscle activity needed to generate a rolling over motion on HR and LR mattress (Roll over evaluations)</b><b></b><br><b>S2A Fig Data: Changes in core body temperature during sleep in young (study I) and old (study II) subjects. </b><b></b><br><b>S2 B Fig Data: EEG delta power changes across the night in young (study I) and old (Study II) subjects</b><b></b><br><b>Table 1 Data: Comparisons of sleep and sleep-related parameters between HR and LR mattress topper use (study I)</b><b></b><br><b>Table 1 PVT Data</b><b></b><br><b>Table 2 stage 3 and 4 Data: Amounts of slow wave sleep and sympathetic nerve activity (LF/HF values) in each 2-hour period (study I)</b><b></b><br><b>Table 2 LF/HF Data</b><b></b><br><b>Table 3 Data: Comparisons of sleep and sleep-related parameters between HR and LR mattress topper use (study II)</b><b></b><br><b>PVT data for Table 3</b><b></b><br><b>S1 Table stage 3 and 4 Data: Amounts of slow wave sleep and sympathetic nerve activity (LF/HF values) in each 2-hour period slept with HR and LR in old subjects (study II): </b><b></b><br><b>S1 Table LH/HF data Data</b><b></b><br><b>S2 Table Data: Comparisons of sleep and sleep-related parameters between young (study I) and old (study II) subjects: </b><b></b><br><b>S2 Table PVT Table</b><b></b><br><b>S3 Table stage 3&4 Data: Amounts of slow wave sleep and sympathetic nerve activity (LF/HF values) in each 2-hour period slept in young (study I) and old (study II) subjects</b><b></b><br> <b>S3 Table LH/HF values Data</b><b><br></b>
DOI: 10.6084/m9.figshare.6267431
title: Readme.txt

description: Readme to accompany the metadata of the manuscript submitted to PeerJ entitled: Variation in the Leaf and Root Microbiome of Sugar Maple (Acer saccharum) at an Elevational Range Limit.
DOI: 10.6084/m9.figshare.6267431.v1
title: Readme.txt

description: Readme to accompany the metadata of the manuscript submitted to PeerJ entitled: Variation in the Leaf and Root Microbiome of Sugar Maple (Acer saccharum) at an Elevational Range Limit.
DOI: 10.17608/k6.auckland.6267422
title: Mapping a geographic map and a population cartogram side by side using R

description: This code creates a geographic map and a corresponding population cartogram side by side. They have the same colour coding to facilitate comparison. Users can modify this code to map their own data. <br>
DOI: 10.17608/k6.auckland.6267422.v1
title: Mapping a geographic map and a population cartogram side by side using R

description: This code creates a geographic map and a corresponding population cartogram side by side. They have the same colour coding to facilitate comparison. Users can modify this code to map their own data. <br>
DOI: 10.17608/k6.auckland.6267422.v2
title: Mapping a geographic map and a population cartogram side by side using R

description: This code creates a geographic map and a corresponding population cartogram side by side. They have the same colour coding to facilitate comparison. Users can modify this code to map their own data. <br>
DOI: 10.6084/m9.figshare.6267410
title: ITS_mapping.txt

description: ITS barcodes for the article submitted to PeerJ: " Variation in the Leaf and Root Microbiome of Sugar Maple (<i>Acer saccharum</i>) at an Elevational Range Limit".
DOI: 10.34740/kaggle/dsv/1450099
title: Albanian News Articles Dataset
DOI: 10.6084/m9.figshare.6267404
title: Megantic_Mapping_File.txt

description: 16S barcodes for the article submitted to PeerJ: " Variation in the Leaf and Root Microbiome of Sugar Maple (<i>Acer saccharum</i>) at an Elevational Range Limit".
DOI: 10.6084/m9.figshare.6267404.v1
title: Megantic_Mapping_File.txt

description: 16S barcodes for the article submitted to PeerJ: " Variation in the Leaf and Root Microbiome of Sugar Maple (<i>Acer saccharum</i>) at an Elevational Range Limit".
DOI: 10.6084/m9.figshare.6267284
title: Rodriguez et al 2018

description: Raw data for publication
DOI: 10.6084/m9.figshare.6267242
title: Estrogen receptor sdf datasets

description: training and test sets for manuscript
DOI: 10.6084/m9.figshare.6267242.v1
title: Estrogen receptor sdf datasets

description: training and test sets for manuscript
DOI: 10.6084/m9.figshare.6267209.v2
title: Effect of traffic density on drivers’ lane change and overtaking maneuvers in freeway situation—A driving simulator–based study

description: <b>Objective:</b> The aim of this study is to examine the effect of traffic density on drivers’ lane change and overtaking maneuvers. The differences between drivers’ left and right lane changing/overtaking maneuvers were also investigated. <b>Method:</b> A driving simulator experiment was conducted and 24 participants took part in this experiment. Based on the driving simulation data, lane change frequency, time duration, average speed, and acceleration were extracted as key variables of lane change maneuvers; overtaking frequency, overtaking duration, initial overtaking distance and headway, instantaneous speed, and acceleration before overtaking were analyzed as the key overtaking variables. One-way repeated measures analysis of variance (ANOVA), the Friedman test, and the Wilcoxon signed rank test were adopted for hypothesis tests with a significance level of .05. Further pairwise comparisons were performed with a Bonferroni correction for multiple comparisons. <b>Results:</b> Some significant differences in lane change and overtake behaviors were observed among different traffic densities: (1) both lane change and overtaking frequencies significantly increase with traffic density; (2) the average lane change acceleration and instantaneous overtaking acceleration significantly increase with traffic density; (3) as the traffic density increases, the initial overtaking distance and headway decrease. As for the effect of the directions of maneuvers, the (1) time duration of lane change and overtaking from the right side was significantly shorter than that from the left side; (2) right initial overtaking distance/headway was smaller than that of the left side; (3) right instantaneous overtaking acceleration was significantly higher than the left instantaneous acceleration. <b>Conclusions:</b> The results showed that as traffic density increases, drivers’ lane changing and overtaking intentions are enhanced. Both initial overtaking distance and headway decrease with traffic density, which might influence road safety. In addition, drivers do not show a preference on the directions of lane change or overtaking according to frequency. However, drivers tend to be more decisive and reckless when overtaking on the right because of a smaller distance/headway before overtaking, higher instantaneous acceleration, and a more restricted field of view compared with overtaking on the left.
DOI: 10.6084/m9.figshare.6267209.v1
title: Effect of traffic density on drivers' lane change and overtaking maneuvers in freeway situation – A driving simulator based study

description: Objective: The aim of this study is to examine the effect of traffic density on drivers' lane change and overtaking maneuvers. The differences between drivers' left and right lane-changing/overtaking maneuvers were also investigated. Method: A driving simulator experiment was conducted and 24 participants took part in this experiment. Based on the driving simulation data, lane change frequency, time duration, average speed and acceleration were extracted as key variables of lane change maneuvers; overtaking frequency, overtaking duration, initial overtaking distance and headway, instantaneous speed and acceleration before overtaking were analyzed as the key overtaking variables. One-way repeated measures ANOVA, Friedman test and Wilcoxon signed-rank test were adopted for hypothesis tests with significance level of 0.05. Further pairwise comparisons were performed with a Bonferroni correction for multiple comparisons. Results: Some significant differences in lane change and overtake behaviors were observed among different traffic densities: 1) both lane change and overtaking frequencies significantly increase with traffic density; 2) the average lane change acceleration and instantaneous overtaking acceleration significantly increase with traffic density; 3) as the traffic density increases, the initial overtaking distance and headway decrease. As for the effect of the directions of maneuvers: 1) the time duration of lane change and overtaking from right side was significantly shorter than that from left side; 2) the right initial overtaking distance/headway was smaller than that of left side; 3) the right instantaneous overtaking acceleration was significantly higher than the left instantaneous acceleration. Conclusions: The results showed that as traffic density increases, drivers' intention for lane change and overtaking is enhanced. Both initial overtaking distance and headway decrease with traffic density, which might influence road safety. In addition, drivers do not show a preference on the directions of lane change or overtaking according to the frequency. However, drivers tend to be more decisive and reckless when conducting the right overtaking because of a smaller distance/headway before overtaking, higher instantaneous acceleration and also a more restricted field of view compared with left overtaking.
DOI: 10.6084/m9.figshare.6267125
title: Experiment description for "Eye tracking analysis of computer program comprehension in programmers with dyslexia"

description: Full description of the experiment set up and media files used in the study reported in:Eye Tracking Analysis of Computer Program Comprehension in Programmers with Dyslexia, McChesney, I and Bond, R., 2018.<br>
DOI: 10.6084/m9.figshare.6265763
title: HMM code and input files

description: Contains data and code to run an HMM optimisation for Hermes insertion data.<br>Contains:<br>The predictors of insertion density:predictors.2016-10-06.tar.gzincludes:insertion motif similarity score (IMSS)nucleosome density scores<br>hidden Markov Model R code<br>transposon-hmm-7-cross-validation.R<br>sample config filelog.III.5A.tr-even.config.r #the code is run like so:cat transposon-hmm-7-cross-validation.R | \R --slave --args config.r input.Rda<br>We also include:<br>sample input files: all-log.and-predictors.2016-10-06.txt.Rda<br><br>Sample output files:<br>log.all-model5A.hmmresult.table.Rda<br><br>Hermes-containing read mapping scores:mapping.scores.txt.gz<br>
DOI: 10.6084/m9.figshare.6265760
title: D. Babić and J. Senčar, MS Excel file containing numerical data from Periodic behaviour in ground-level environmental radioactivity: fingerprints of solar activity?

description: A(t) and D(t) data, FFT results
DOI: 10.6084/m9.figshare.6265760.v1
title: D. Babić and J. Senčar, MS Excel file containing numerical data from Periodic behaviour in ground-level environmental radioactivity: fingerprints of solar activity?

description: A(t) and D(t) data, FFT results
DOI: 10.6084/m9.figshare.6265754
title: HMM-defined element (HDE) data

description: HMM-defined elements (HDEs) with various scores.<br><br>hermes-all.log-stateblocks.txt.gz contains all HMM-defined elements.<br><br>hermes-100nt.log-stateblocks.txt.gz contains the HMM-defined elements at least 100nt long, with additional data,<br>Including conservation during evolution (phyloP) and their RNA expression levels (RPKM from log phase cultures).<br><br><br><br><br>
DOI: 10.6084/m9.figshare.6265754.v1
title: HMM-defined element (HDE) data

description: HMM-defined elements (HDEs) with various scores.<br><br>hermes-all.log-stateblocks.txt.gz contains all HMM-defined elements.<br><br>hermes-100nt.log-stateblocks.txt.gz contains the HMM-defined elements at least 100nt long, with additional data,<br>Including conservation during evolution (phyloP) and their RNA expression levels (RPKM from log phase cultures).<br><br><br><br><br>
DOI: 10.6084/m9.figshare.6265748
title: gene-based data

description: Statistics for each protein-coding gene, used for the plot: Gene mean HMM states are estimators of gene disruption fitness. <br>Contains information about the HMM state for each gene s(from the MHH analysis of Hermes insertions), and <br>genelengthessential statussolid media fitness estimate (from Malecki et al. Genome Biology (2016) 17:240 DOI 10.1186/s13059-016-1101-2)<br>expresion data: log.phase.RPKMsum.mRNA.cpcsum.protein.cpc<br><br>and conservation (mean.phylop) <br><br><br>
DOI: 10.6084/m9.figshare.6265745
title: comparative genomics data

description: Contains assemblies/genomes of all four Schizosaccharomyces yeasts:<br>Schizosaccharomyces-cryophilus_assembly_V2.fa.gz<br>Schizosaccharomyces-octosporus_assembly_V2.fa.gz<br>Schizosaccharomyces_japonicus_assembly_V1.1.fa.gz<br>Schizosaccharomyces_pombe.0.dat.fasta.gz<br><br>A progressive cactus alignment:<br>halTreePhyloP.ProgCact_run3.tgz<br> Nucleotide-level phylop measures of constraint:<br>Schizosaccharomyces-species.phyloP.wig.tar.gz<br><br>
DOI: 10.6084/m9.figshare.6265745.v1
title: comparative genomics data

description: Contains assemblies/genomes of all four Schizosaccharomyces yeasts:<br>Schizosaccharomyces-cryophilus_assembly_V2.fa.gz<br>Schizosaccharomyces-octosporus_assembly_V2.fa.gz<br>Schizosaccharomyces_japonicus_assembly_V1.1.fa.gz<br>Schizosaccharomyces_pombe.0.dat.fasta.gz<br><br>A progressive cactus alignment:<br>halTreePhyloP.ProgCact_run3.tgz<br> Nucleotide-level phylop measures of constraint:<br>Schizosaccharomyces-species.phyloP.wig.tar.gz<br><br>
DOI: 10.6084/m9.figshare.6265721
title: Ground Truth

description: Ground Truth Provided in MAT format. Pulmonary Embolism regions are determined by the gray-level 1 as the foreground, in contrast to the background with the gray-level 0.
DOI: 10.6084/m9.figshare.6265703
title: mean insertion data for 100 nt windows (figure1)

description: Average of genome positions over 100nt windows.Data for fig1.<br><br>Contains: <br>Genetic diversity (pi), using the 57 non-clonal strains described (Jeffares 2015)Hermes insertions per site and average insertion count.<br>Divergence data, rates estimated using phyloP.<br>
DOI: 10.6084/m9.figshare.6265703.v1
title: mean insertion data for 100 nt windows (figure1)

description: Average of genome positions over 100nt windows.Data for fig1.<br><br>Contains: <br>Genetic diversity (pi), using the 57 non-clonal strains described (Jeffares 2015)Hermes insertions per site and average insertion count.<br>Divergence data, rates estimated using phyloP.<br>
DOI: 10.6084/m9.figshare.6265691
title: Companion files for "Studying associative learning without solving learning equations"

description: These are companion files to the paper: Studying associative learning without solving learning equations, in press at Journal of Mathematical Psychology as of June<br>2018. The solvingModel.py file reproduces the calculations in the paper using the sympy symbolic computation package in python. The Figures.R file reproduces the figures in the paper.<br><br>
DOI: 10.6084/m9.figshare.6265691.v2
title: Companion files for "Studying associative learning without solving learning equations"

description: These are companion files to the paper: Studying associative learning without solving learning equations, in press at Journal of Mathematical Psychology as of June<br>2018. The solvingModel.py file reproduces the calculations in the paper using the sympy symbolic computation package in python. The Figures.R file reproduces the figures in the paper.<br><br>
DOI: 10.6084/m9.figshare.6265685
title: Patient35

description: Male Patient with 451 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265679
title: Patient34

description: Male Patient with 189 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265670
title: Patient33

description: Female Patient with 435 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265658
title: Patient32

description: Female Patient with 155 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265655
title: Patient31

description: Male Patient with 268 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265646
title: Patient30

description: Female Patient with 205 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265643
title: Patient29

description: Male Patient with 197 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265640
title: Patient28

description: Female Patient with 183 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265640.v1
title: Untitled Item

description: Female Patient with 183 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265628
title: Cell_Line_and_Gene_Data_Edited.csv

description: Pancreatic Cell Line Gene Data
DOI: 10.6084/m9.figshare.6265628.v1
title: Cell_Line_and_Gene_Data_Edited.csv

description: Pancreatic Cell Line Gene Data
DOI: 10.6084/m9.figshare.6265613
title: Patient27

description: Male Patient with 277 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265610
title: Cell_Line_and_Gene_Data.csv

description: Dataset with Pancreatic cell lines gene expression data.
DOI: 10.6084/m9.figshare.6265610.v2
title: Cell_Line_and_Gene_Data.csv

description: Dataset with Pancreatic cell lines gene expression data.
DOI: 10.6084/m9.figshare.6265610.v1
title: Cell_Line_and_Gene_Data.csv

description: Dataset with Pancreatic cell lines gene expression data.
DOI: 10.6084/m9.figshare.6265604
title: Patient26

description: Female Patient with 213 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265592
title: Patient25

description: Female Patient with 221 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265589
title: Patient24

description: Female Patient with 139 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265586
title: Patient23

description: Male Patient with 297 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265583
title: Patient22

description: Female Patient with 185 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265574
title: Patient21

description: Male Patient with 217 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265562
title: Patient20

description: Male Patient with 424 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265556
title: Patient19

description: Male Patient with 370 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265544
title: Patient18

description: Male Patient with 452 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265532
title: Patient17

description: Female Patient with 475 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265529
title: Barry 2018 Data.zip

description: Fileset contains two folders:RSA: Neural patterns (experiment_1.mat and experiment_2.mat) and code (RSA.m) to perform Representational Similarity AnalysisParametric_analysis: SPM T-map of modulation of activity by memory remoteness<br><br><br>
DOI: 10.6084/m9.figshare.6265529.v1
title: Data.zip

description: Fileset contains three folders:RSA: Neural patterns (experiment_1.mat and experiment_2.mat) and code (RSA.m) to perform Representational Similarity AnalysisRatings: Subjective and objective memory ratings (Ratings.xls)Parametric_analysis: SPM T-map of modulation of activity by memory remoteness<br><br>
DOI: 10.6084/m9.figshare.6265529.v3
title: Barry 2018 Data.zip

description: Fileset contains two folders:RSA: Neural patterns (experiment_1.mat and experiment_2.mat) and code (RSA.m) to perform Representational Similarity AnalysisParametric_analysis: SPM T-map of modulation of activity by memory remoteness<br><br><br>
DOI: 10.6084/m9.figshare.6265529.v2
title: Barry 2018 Data.zip

description: Fileset contains three folders:RSA: Neural patterns (experiment_1.mat and experiment_2.mat) and code (RSA.m) to perform Representational Similarity AnalysisRatings: Subjective and objective memory ratings (Ratings.xls)Parametric_analysis: SPM T-map of modulation of activity by memory remoteness<br><br>
DOI: 10.6084/m9.figshare.6265526
title: Patient16

description: Female Patient with 235 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265520
title: Patient15

description: Male Patient with 250 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265511
title: Patient14

description: Female Patient with 217 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265505
title: Patient13

description: Male Patient with 189 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265502
title: Patient12

description: Female Patient with 178 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265496
title: Segmented endocast of 'Chirodipterus' australis BMNH P56035

description: Segmented endocast of 'Chirodipterus' australis BMNH P56035
DOI: 10.6084/m9.figshare.6265493
title: Patient11

description: Female Patient with 217 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.6265490
title: Segmented endocast of 'Chirodipterus' australis BMNH P56038

description: Segmented endocast of 'Chirodipterus' australis BMNH P56038
DOI: 10.6084/m9.figshare.6265490.v1
title: Segmented endocast of 'Chirodipterus' australis BMNH P56038

description: Segmented endocast of 'Chirodipterus' australis BMNH P56038
DOI: 10.6084/m9.figshare.6265487
title: Patient10

description: Male Patient with 204 slice of pulmonary embolism CT-Angiography.