cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wvtb6f
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 "Continent is Europe",
 "License is CC0 1.0",
 "MediaType is one of (Video, Image)",
 "TaxonKey is Petronia petronia (Linnaeus, 1766)"
 ]
}

 The dataset includes 77 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0193333-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8juupq
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polychrus jacquelinae Koch, Venegas, Garcia-Bravo & Böhme, 2011"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000703-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vumz4g
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ocotea rupestris L.C.S.Assis & Mello-Silva"
 ]
}

 The dataset includes 12 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180588-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8usosx
title: Occurrence Download

description: A dataset containing 1356023 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Chinese Taipei"
 ]
}

 The dataset includes 1356023 records from 535 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000887-160509122628363/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24953865
title: <b>Phyllosphere pathogen</b>

description: Plant growth trade-offs related to the colonization potential of pathogenic fungi. However, the potential co-variation between plant functional diversity and the diversity of pathogenic fungi colonizing plant leaves has been largely overlooked in previous studies, posing a challenge to our comprehension of the relationship between plant phyllosphere pathogenic fungi and plant growth trade-offs. In this study, we collected fresh phyllosphere samples from 84 individuals of 12 dominant species in the Mt. Huangshan Forest dynamics plot. We quantified pathogenic fungi in these samples using high-throughput sequencing technology and functional prediction. Additionally, we employed the ‘Stratefy’ to calculate plant CSR ecological strategies. Our findings identified Mycosphaerellaceae and Teratosphaeriaceae as the dominant pathogenic fungi in the subtropical forest. Hosts, rather than habitats, exerted a greater influence on phyllosphere pathogenic fungi. Utilizing multiple regression linear models and null models, we delved into the impacts of environmental factors on pathogen diversity and the mechanisms governing phyllosphere microbial community assembly. The outcomes underscored that phyllosphere microbial diversity is influenced by leaf pH, C: N, and dry weight. However, stochastic processes predominantly shaped the spatial variation of phyllosphere microbial community composition, primarily driven by neutral processes. To investigate whether fast-growing species are more susceptible to pathogens, we scrutinized the relationship between ruderals’ percentage (R selection) and pathogen diversity through linear regression. The results unveiled a significant negative correlation between R-selection and pathogen diversity. Finally, we quantified the extent to which different levels of species taxonomy explained phyllosphere pathogenic fungal diversity and leaf functional traits using linear mixed-effects analysis with variance partitioning. These analyses revealed that levels of family explained the highest degree of variation. Overall, our results suggest that life history trade-offs in plant-pathogen interactions may significantly influence the mechanisms contributing to equilibrium between species in this community. This lays a foundation for further research on the effects of phyllosphere pathogenic fungi on the coexistence of plant species.
DOI: 10.6084/m9.figshare.24953865.v1
title: <b>Phyllosphere pathogen</b>

description: Plant growth trade-offs related to the colonization potential of pathogenic fungi. However, the potential co-variation between plant functional diversity and the diversity of pathogenic fungi colonizing plant leaves has been largely overlooked in previous studies, posing a challenge to our comprehension of the relationship between plant phyllosphere pathogenic fungi and plant growth trade-offs. In this study, we collected fresh phyllosphere samples from 84 individuals of 12 dominant species in the Mt. Huangshan Forest dynamics plot. We quantified pathogenic fungi in these samples using high-throughput sequencing technology and functional prediction. Additionally, we employed the ‘Stratefy’ to calculate plant CSR ecological strategies. Our findings identified Mycosphaerellaceae and Teratosphaeriaceae as the dominant pathogenic fungi in the subtropical forest. Hosts, rather than habitats, exerted a greater influence on phyllosphere pathogenic fungi. Utilizing multiple regression linear models and null models, we delved into the impacts of environmental factors on pathogen diversity and the mechanisms governing phyllosphere microbial community assembly. The outcomes underscored that phyllosphere microbial diversity is influenced by leaf pH, C: N, and dry weight. However, stochastic processes predominantly shaped the spatial variation of phyllosphere microbial community composition, primarily driven by neutral processes. To investigate whether fast-growing species are more susceptible to pathogens, we scrutinized the relationship between ruderals’ percentage (R selection) and pathogen diversity through linear regression. The results unveiled a significant negative correlation between R-selection and pathogen diversity. Finally, we quantified the extent to which different levels of species taxonomy explained phyllosphere pathogenic fungal diversity and leaf functional traits using linear mixed-effects analysis with variance partitioning. These analyses revealed that levels of family explained the highest degree of variation. Overall, our results suggest that life history trade-offs in plant-pathogen interactions may significantly influence the mechanisms contributing to equilibrium between species in this community. This lays a foundation for further research on the effects of phyllosphere pathogenic fungi on the coexistence of plant species.
DOI: 10.15468/dl.ksjac5
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Stenella coeruleoalba (Meyen, 1833)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 65 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027585-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xjwdqw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Delphinus coeruleoalbus Meyen, 1833",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027586-240626123714530/datasets/export for details.
DOI: 10.15468/dl.dpxacw
title: Occurrence Download

description: A dataset containing 716 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lateolabrax japonicus (Cuvier, 1828)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 716 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027588-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sjeyzy
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lates calcarifer (Bloch, 1790)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 25 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027589-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cq5gzd
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Limanda punctatissima (Steindachner, 1879)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 34 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027590-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26316832
title: The data in A Deep Learning Approach of Artificial Neural Network with Attention Mechanism to Predicting Marine Biogeochemistry data

description: 'training data for MOSAIC.csv' and 'training data for GlodAP.csv' are the training sets for RF, ANN and ANN-attThe data used in Figure 1, Figure 3 to Figure 6.Matlab colors the mapping of oxygen and 14C by Figure 5 and 6.
DOI: 10.6084/m9.figshare.26316832.v1
title: The data in A Deep Learning Approach of Artificial Neural Network with Attention Mechanism to Predicting Marine Biogeochemistry data

description: 'training data for MOSAIC.csv' and 'training data for GlodAP.csv' are the training sets for RF, ANN and ANN-attThe data used in Figure 1, Figure 3 to Figure 6.Matlab colors the mapping of oxygen and 14C by Figure 5 and 6.
DOI: 10.15468/dl.7d7jxm
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myzopsetta punctatissimus (Steindachner, 1879)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027591-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c7kvzg
title: Occurrence Download

description: A dataset listing the 5750 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC0 1.0, CC-BY 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset's 5750 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027584-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26316859
title: Table S4

description: KEGG pathway analysis of differential lipids in <i>Mycoplasma bovis.</i>
DOI: 10.15468/dl.wn753a
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neophocaena phocaenoides (G.Cuvier, 1829)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 25 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027592-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12747550
title: Long-read methylation data analysis with NanoMethViz and Bioconductor

description: Example data for Bioc2024 workshop. Contains ModBam files and sample annotations. Data comes from mouse neural stem cells aligned to mm10. BAM files have been split into haplotypes and subset to chromosome 7.
DOI: 10.5281/zenodo.12747551
title: Long-read methylation data analysis with NanoMethViz and Bioconductor

description: Example data for Bioc2024 workshop. Contains ModBam files and sample annotations. Data comes from mouse neural stem cells aligned to mm10. BAM files have been split into haplotypes and subset to chromosome 7.
DOI: 10.5281/zenodo.12753132
title: 22RV1 NOVOSEQ PC DORMANCY
DOI: 10.5281/zenodo.12753133
title: 22RV1 NOVOSEQ PC DORMANCY
DOI: 10.15468/dl.4jbv5j
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Delphinus phocaenoides G.Cuvier, 1829",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027593-240626123714530/datasets/export for details.
DOI: 10.15468/dl.pf4gzq
title: Occurrence Download

description: A dataset containing 671000 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC0 1.0, CC-BY 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 671000 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027581-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6qd24b
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neophocaena asiaeorientalis (Pilleri & Gihr, 1972)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 53 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027594-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xv75qz
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euthynnus affinis (Cantor, 1849)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 54 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027595-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nrkps5
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ethiopia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ficus ruspolii Warb."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027596-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.87nb9b
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thynnus affinis Cantor, 1849",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027597-240626123714530/datasets/export for details.
DOI: 10.15468/dl.zufp4h
title: Occurrence Download

description: A dataset containing 213703107 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2020",
 "Year is less than 2021",
 "TaxonKey is one of (Animalia, Plantae, Archaea, Chromista, Fungi, Viruses)"
 ]
}

 The dataset includes 213703107 records from 6156 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027587-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g9j4df
title: Occurrence Download

description: A dataset listing the 979 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((91.25 47.6,91.26 47.68,91.26 47.71,91.27 47.76,91.28 47.81,91.28 47.88,91.24 47.89,91.15 47.92,91.02 47.98,90.95 48.01,90.89 48.03,90.84 48.05,90.8 48.08,90.75 48.12,90.74 48.19,90.73 48.32,90.75 48.34,90.77 48.36,90.79 48.37,90.81 48.39,90.89 48.45,90.97 48.46,91.09 48.48,91.14 48.49,91.24 48.51,91.28 48.6,91.36 48.63,91.34 48.67,91.31 48.7,91.2 48.71,91.07 48.68,90.97 48.61,90.84 48.61,90.75 48.67,90.59 48.67,90.45 48.67,90.32 48.67,90.26 48.7,90.2 48.73,90.14 48.8,90.06 48.85,89.98 48.9,89.88 48.95,89.76 48.93,89.63 48.91,89.54 48.94,89.45 48.99,89.29 49.11,89.07 49.18,88.97 49.22,88.67 49.23,88.5 49.26,88.5 49.33,88.56 49.38,88.75 49.45,88.84 49.54,88.37 49.65,88.1 49.47,88.04 49.39,88 49.18,87.8 49.16,87.87 49.07,87.9 49,88.37 48.91,89 48.85,89.13 48.75,89.18 48.4,89.19 48.28,89.74 48.29,90.06 48.01,90.32 47.75,90.43 47.49,90.43 47.41,90.47 47.38,90.47 47.31,90.67 47.37,90.76 47.54,90.83 47.61,90.99 47.65,91.1 47.62,91.18 47.61,91.25 47.58,91.25 47.6))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 979 records were derived from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0223964-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4k25fs
title: Occurrence Download

description: A dataset containing 253394 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tephritidae"
 ]
}

 The dataset includes 253394 records from 564 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126211-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8uegf2
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Agama weidholzi Wettstein, 1932"
 ]
}

 The dataset includes 40 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0274641-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2u85st
title: Occurrence Download

description: A dataset containing 5504 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pongo pygmaeus (Linnaeus, 1760)"
 ]
}

 The dataset includes 5504 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126245-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.58x987
title: Occurrence Download

description: A dataset containing 828 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acritoscincus trilineatus (Gray, 1838)"
 ]
}

 The dataset includes 828 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0274644-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4z5tv9
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "Geometry POLYGON((-12.9065 54.62022,-4.04461 54.62022,-4.04461 59.35896,-12.9065 59.35896,-12.9065 54.62022))",
 "HasGeospatialIssue is false",
 "PublishingOrg is one of (67b2263f-6990-4d9d-b32b-20aa72ef4fbc, 28eb1a3f-1c15-4a95-931a-4af90ecb574d)",
 "TaxonKey is Fratercula arctica (Linnaeus, 1758)"
 ]
}

 The dataset's 1 records were derived from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126214-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.42k79c
title: Occurrence Download

description: A dataset containing 1695 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Argemone mexicana L."
 ]
}

 The dataset includes 1695 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0274660-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.68jv8k
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carum jahandiezii Litard. & Maire"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126244-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ph9y5
title: Occurrence Download

description: A dataset containing 531 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phocoena sinus Norris & McFarland, 1958"
 ]
}

 The dataset includes 531 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0367244-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nbjsua
title: Occurrence Download

description: A dataset containing 401 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astrochelys radiata (Shaw, 1802)"
 ]
}

 The dataset includes 401 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126223-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5p864b
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hellenocarum depressum (Hartvig & Kit Tan) Kljuykov & Zakharova"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126229-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.