cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5460097
title: Eurodoc Survey on Publishing in Open Science 2020

description: The Eurodoc Survey on Publishing in Open Science 2020 was a survey launched to collect data and the state-of-art about Open Science and publishing platform, realised by Eurodoc within the 'Open Research Europe' (ORE) project. ORE is an open access<br> Publishing Platform for Horizon 2020 beneficiaries offering rapid publication of a wide range of article types without editorial bias. All articles benefit from transparent peer review and will be published under an open license. ORE is a significant step towards Open Science in Europe. Eurodoc, as an expert partner in the project, will ensure that the voice of early-career researchers is heard. This survey aims to provide the ORE project team with insights related to awareness, perception and experience with open practices and tools, from the perspective of doctoral candidates and junior researchers. Survey results and the underlying data are published in F1000: https://f1000research.com/articles/10-1306/v1. <strong>About Eurodoc</strong> Eurodoc, the European Council of Doctoral Candidates and Junior Researchers, is a grassroots federation of national associations of early career researchers (ECRs) from European countries. Eurodoc was founded in 2002 and then established in 2005 as a non-profit, international volunteer organisation based in Brussels. As representatives of ECRs at European level, we engage with all major stakeholders in research and innovation in Europe. Eurodoc primarily focuses and advocates for doctoral candidates and junior researchers<sup>[1]</sup>, that is, researchers at R1 and R2 stages.
DOI: 10.5281/zenodo.5460096
title: Eurodoc Survey on Publishing in Open Science 2020

description: The Eurodoc Survey on Publishing in Open Science 2020 was a survey launched to collect data and the state-of-art about Open Science and publishing platform, realised by Eurodoc within the 'Open Research Europe' (ORE) project. ORE is an open access<br> Publishing Platform for Horizon 2020 beneficiaries offering rapid publication of a wide range of article types without editorial bias. All articles benefit from transparent peer review and will be published under an open license. ORE is a significant step towards Open Science in Europe. Eurodoc, as an expert partner in the project, will ensure that the voice of early-career researchers is heard. This survey aims to provide the ORE project team with insights related to awareness, perception and experience with open practices and tools, from the perspective of doctoral candidates and junior researchers. Survey results and the underlying data are published in F1000: https://f1000research.com/articles/10-1306/v1. <strong>About Eurodoc</strong> Eurodoc, the European Council of Doctoral Candidates and Junior Researchers, is a grassroots federation of national associations of early career researchers (ECRs) from European countries. Eurodoc was founded in 2002 and then established in 2005 as a non-profit, international volunteer organisation based in Brussels. As representatives of ECRs at European level, we engage with all major stakeholders in research and innovation in Europe. Eurodoc primarily focuses and advocates for doctoral candidates and junior researchers<sup>[1]</sup>, that is, researchers at R1 and R2 stages.
DOI: 10.6084/m9.figshare.17702513.v1
title: Molecular karyotyping

description: CNVs detected in MMC-treated and untreated cells using molecular karyotyping. Raw data
DOI: 10.6084/m9.figshare.17702513
title: Molecular karyotyping

description: CNVs detected in MMC-treated and untreated cells using molecular karyotyping. Raw data
DOI: 10.17632/y2944h3zhv.1
title: The survival(mathematic) model database of human digestive tract cells exposed to electroporation pulses

description: Supplementary files for "Survival model database of human digestive system cells exposed to electroporation pulses: An in vitro and in silico study", inculding 3 tables: RAR of TI, RAR of EI and Cell Survival Rate of All Cell Lines.
DOI: 10.17632/w6gfw3g5dt.1
title: Chimeric CRISPR-CasX enzymes and guide RNAs for improved genome editing activity: uncropped gels

description: Uncropped gels for manuscript resubmission
DOI: 10.17632/zvc4jy2d2v.1
title: Statistical raw data for syntactically dependent tag combinations after core words

description: In order to conclude the pattern of extracted concepts, the different syntactic structures were first categorised. We selected a certain number of patented utterances for DP analysis and manually eliminated invalid and incorrect results from the analysis, retaining the results of 1000 utterances for analysis.
DOI: 10.5281/zenodo.5809085
title: Analysis of internet usage and bioblitz frequency in the Global South

description: This dataset was used to analyse factors contributing to the number of bioblitzes conducting in countries in the Global South. This is part of a review into the effectiveness of bioblitz as a method for collecting data on biodiversity. We modeled population and internet usage with the number of iNaturalist Bioblitzes in a country from our sample (Groom 2021). We only just looked at those global regions where citizen science has tended to have lower prevalence in the past (Africa, Asia, and Latin America, and the Caribbean) compared to other regions. We identified a total of 254 Bioblitz projects from iNaturalist in 37 countries, in Africa (30 projects in 13 countries); Asia (71 projects in 11 countries); and Latin America and the Caribbean (153 projects in 13 countries). We took the total population of each country from the mean of 2015-18 values in millions from https://population.un.org/wpp/Download/Standard/Population/ (United Nations, Department of Economic and Social Affairs, Population Division (2019). <em>World Population Prospects 2019, Online Edition. Rev. 1.</em>). Internet usage was taken as the percentage of individuals using the internet in 2017 (http://data.un.org/). The natural log of the number of iNaturalist projects was modelled against the log of the population in millions and the internet usage using the lm package of R. <pre><code>SUMMARY_DATA &lt;- read.delim2("summary_data.tsv", row.names=1) model &lt;- lm(log(projects) ~log(population) + internet, data=SUMMARY_DATA) summary(model) </code></pre> Variable Coefficient Std. Error t-Statistic Prob. log(population) in millions 0.345 0.0865 3.99 0.0003 *** internet usage as a percentage of individuals per country 0.016 0.0060 2.62 0.0130 * Residual standard error: 0.9167 on 34 degrees of freedom Multiple R-squared: 0.3911, Adjusted R-squared: 0.3553 F-statistic: 10.92 on 2 and 34 DF, p-value: 0.0002176 To view properties of the model to ensure it conformed to the assumptions of the model and was a good fit. Plots are included in the attached files. <pre><code>par(mfrow = c(2,2)) plot(model)</code></pre> To view other correlations in the data the following code can be used. The output is included in the attached files. <pre><code>correlations &lt;- cor(SUMMARY_DATA[,c(2,3,4,6,11,13,14)],method = c("spearman")) install.packages("corrplot") library("corrplot") corrplot(correlations, method="square") </code></pre>
description: {"references": ["Quentin Groom. (2021). AgentschapPlantentuinMeise/iNatBioblitzes: Initial release (V1.0). Zenodo. https://doi.org/10.5281/zenodo.5555975"]}
DOI: 10.5281/zenodo.5809084
title: Analysis of internet usage and bioblitz frequency in the Global South

description: This dataset was used to analyse factors contributing to the number of bioblitzes conducting in countries in the Global South. This is part of a review into the effectiveness of bioblitz as a method for collecting data on biodiversity. We modeled population and internet usage with the number of iNaturalist Bioblitzes in a country from our sample (Groom 2021). We only just looked at those global regions where citizen science has tended to have lower prevalence in the past (Africa, Asia, and Latin America, and the Caribbean) compared to other regions. We identified a total of 254 Bioblitz projects from iNaturalist in 37 countries, in Africa (30 projects in 13 countries); Asia (71 projects in 11 countries); and Latin America and the Caribbean (153 projects in 13 countries). We took the total population of each country from the mean of 2015-18 values in millions from https://population.un.org/wpp/Download/Standard/Population/ (United Nations, Department of Economic and Social Affairs, Population Division (2019). <em>World Population Prospects 2019, Online Edition. Rev. 1.</em>). Internet usage was taken as the percentage of individuals using the internet in 2017 (http://data.un.org/). The natural log of the number of iNaturalist projects was modelled against the log of the population in millions and the internet usage using the lm package of R. <pre><code>SUMMARY_DATA &lt;- read.delim2("summary_data.tsv", row.names=1) model &lt;- lm(log(projects) ~log(population) + internet, data=SUMMARY_DATA) summary(model) </code></pre> Variable Coefficient Std. Error t-Statistic Prob. log(population) in millions 0.345 0.0865 3.99 0.0003 *** internet usage as a percentage of individuals per country 0.016 0.0060 2.62 0.0130 * Residual standard error: 0.9167 on 34 degrees of freedom Multiple R-squared: 0.3911, Adjusted R-squared: 0.3553 F-statistic: 10.92 on 2 and 34 DF, p-value: 0.0002176 To view properties of the model to ensure it conformed to the assumptions of the model and was a good fit. Plots are included in the attached files. <pre><code>par(mfrow = c(2,2)) plot(model)</code></pre> To view other correlations in the data the following code can be used. The output is included in the attached files. <pre><code>correlations &lt;- cor(SUMMARY_DATA[,c(2,3,4,6,11,13,14)],method = c("spearman")) install.packages("corrplot") library("corrplot") corrplot(correlations, method="square") </code></pre>
description: {"references": ["Quentin Groom. (2021). AgentschapPlantentuinMeise/iNatBioblitzes: Initial release (V1.0). Zenodo. https://doi.org/10.5281/zenodo.5555975"]}
DOI: 10.17632/2r5fh4v56z.1
title: Supplemental information

description: Impact of high-grain diet feeding on mucosa-associated bacterial community and gene expression of tight junction proteins and inflammatory cytokines in the small intestine of dairy cattle
DOI: 10.17632/gnh4bf5x4r.1
title: carbon emission reduction data in Shanghai Port

description: Data come from port statistical yearbook, Shanghai port annual report and sustainable development report.
DOI: 10.17632/shpsj8pr6j.2
title: Data for Notes on Hypericum fasciculatum (Clusiaceae) in South Florida Depression Marshes: With Attention to Structural Adaptations, to the Biological Context, and to Floral Biology

description: Field data tables plus study site list and list of species encountered March 2020-Oct 2021 studying Hypericum fasciculatum (Clusiaceae) in Palm Beach County, Florida.   These accompany a manuscript Notes on Hypericum fasciculatum (Clusiaceae) in South Florida Depression Marshes: With Attention to Structural Adaptations, to the Biological Context, and to Floral Biology submitted 10/16/2021 to the Journal of the Torrey Botanical Society.
DOI: 10.17632/p54drnsn4c.1
title: STRUCTURE REACTIVITY RELATIONSHIP OF SELECTIVE ARYL SULFONATE ANTINEOPLASTIC ALKYLATING AGENTS

description: Data set of all Gaussian calculated output files (.log) for the article, titled "STRUCTURE REACTIVITY RELATIONSHIP OF SELECTIVE ARYL SULFONATE ANTINEOPLASTIC ALKYLATING AGENTS".
DOI: 10.17632/mwck57c97p.1
title: Is muscle architecture different in athletes with a previous hamstring strain? A systematic Review and Meta-Analysis

description: Data of the included studies in Meta analysis
DOI: 10.17632/fdm8924tkp.2
title: Distinct colony phenotypes caused by diploid male production in the buff-tailed bumblebee Bombus terrestris

description: Datasets and R script used for the study.
DOI: 10.17632/nz6f98gsh9.1
title: IFPSO

description: This code runs PSO on a fused image.
DOI: 10.17632/4cgwtdn7wb.1
title: A dynamic spatial model estimation of the effects of energy usage, spatial spillover of CO2 emissions and exports on CO2 emissions in Africa

description: Data on CO2 emissions in Africa
DOI: 10.17632/b7kxcyszkh.1
title: Home Care Follow up determine the point of inversion of IL-6 levels in relation to C-Reactive Protein as the cytokine storm marker in COVID-19

description: Draft version with Figures
DOI: 10.17632/kz3rx67cgw.1
title: An open-source and low-cost atomic force microscope controller for high-speed imaging 

description: An open-source and low-cost AFM controller with a sinusoidal scanning function for high-speed scanning. The proposed AFM system achieved a scan rate of 55 line/s (9.3 s/frame for 512×512 pixels image), and the cost of the whole AFM system was below 4000 US dollars.
DOI: 10.17632/wm39pzs4wk.1
title: Antibiotic resistance profile and genotype of 51 carbapenemase-producing Gram-negative bacilli

description: Biosynthesis of silver nanoparticles using carbapenem-resistant Gram-negative bacilli and evaluating its antibacterial properties against multidrug-resistant pathogens
DOI: 10.17632/8pvfs5wyzf.5
title: Bangladesh Agricultural Datasets

description: We have collected the crop transplanting time data, harvesting time data and temperature data based on crop transplanting data from the yearbook of Agriculture Statistics Bangladesh 2020 . After that we have collected crop season data based on crop transplantation time data from the Bangladesh Perspective Agricultural Crop Seasons Article. We then pre-process and aggregate all the data into a complete data set. This dataset contains information on 33 crops of Kharif 1 season, 22 crops of Rabi season and 48 crops of Kharif 2. In all, our dataset contains information on a total of 104 Bangladeshi crops. After that we analyzed our raw data through different types of algorithm.
DOI: 10.17632/98nt6b9dvc.1
title: NGS primary medulloblastoma

description: Biopsy Sample.
DNA from FFPE samples was subjected to the library construction with the KAPA HyperPlus Kit (Roche) and to the enrichment of sequences belonging to 165 cancer related genes using SeqCap EZ Choice Probes (Roche). Sequencing was performed using the NextSeq 500 platform (Illumina, USA) in a pair-end mode for 150 cycles in forward and reverse orientations. The mean depth of the targeted sequencing coverage for FFPE-derived DNA sample was 490×.
DOI: 10.17632/4ntfwyr9x7.1
title: Hepatic transcriptomic and serum bile acids-targeted metabolomic analysis of swamp eel (Monopterus albus) fed high-carbohydrate diet supplemented with Saccharina japonica

description: High-carbohydrate diet induce liver injury which can reduce harvest yields and generate economic losses in reared fish species. Macroalgae Saccharina japonica (SJ) has been reported to ameliorate the liver injury in mammals, thus, we hypothesized that high-carbohydrate diet supplemented with SJ can improve high-carbohydrate diet-induced liver injury in fish. Firstly, we obtained the transcriptome of the fish by next generation sequencing (NGS) and de novo assbemby. We annotated the unigene of the transcriptome and analyzed differentially expressed genes (DEG) in liver of fish fed the normal diet, high-carbohydrate diet, and high-carbohydrate diet supplemented with 2.5% SJ. Secondly, we identified the bile acids profile of serum bile acids-targeted metabolome by UPLC-MS analysis and analyzed the differential bile acids in fish fed the normal diet, high carbohydrate diet, and high carbohydrate diet supplemented with 2.5% SJ. Hepatic transcriptomic and serum bile acids-targeted metabolomic analysis revealed that several important DEG, bile acids and KEGG pathway were identified to be potentially involved in ameliorating liver injury of fish.
DOI: 10.17632/s33r57h5zm.2
title: (Dataset) Web accessibility of the e-commerce website

description: Evaluation of the accessibility of e-commerce sites
DOI: 10.17632/fdd38cdtkj.1
title: SI_PAHs in Arctic & Atlantic 2012

description: Supporting Information including sampling record and PAH data.
DOI: 10.17632/s66gf2bbtw.1
title: Receptor binding and complex structures of human ACE2 to spike RBD from Omicron and Delta SARS-CoV-2

description: Recent VOC, Omicron (B.1.1.529) has raised many scientific questions and public concern as it obtains unexpected numbers of mutations in the receptor-binding domain (RBD) of the spike protein. Here we tested the human receptor ACE2 (hACE2) binding to the VOC RBDs and resolved the crystal and cryo-EM structures of the Omicron RBD-hACE2 complex and the crystal structure of Delta RBD-hACE2 complex. Unlike Alpha, Beta and Gamma, we found that Omicron RBD binding to hACE2 has similar affinity to the prototype RBD which might due to compensation of multiple mutations for both immune escape and transmissibility. The complex structures of both Omicron-hACE2 and Delta-hACE2 reveal the structural basis of the RBD specific mutations to binding to the hACE2.
DOI: 10.17632/kp5pyzk4b5.1
title: Turmeric Prices Data

description: The time series daily data on Turmeric Prices traded at National Commodities Derivatives Exchange India for the period 01 January 2005 to 31 December 2015. The data  were used to identify the relationship between spot and futures prices. The spot prices data set were classified into near month futures, mid month futures and far month futures based on the maturity date. The spot prices data set were classified into near month futures, mid month futures and far month futures based on the maturity date. The findings indicate no relationship between spot and near month, mid month, far month futures of turmeric during the study period. The first sheet gives the raw data on turmeric prices, the second sheet provides the data after removing duplication of same day prices along with logarithmic returns, the  third, fourth and the fifth sheet gives the data on near month futures , mid month futures and far month turmeric futures along with logarithmic returns. The findings indicate no relationship between spot and near month, mid month, far month futures of turmeric during the study period.
DOI: 10.17632/36bmdccjtt.1
title: Chillies Spot Prices

description: The time series daily data on Chillies Prices traded at National Commodities Derivatives Exchange India for the period 10 November 2005 to 31 December 2015  were used to identify the relationship between spot and futures prices. The spot prices data set were classified into near month futures, mid month futures and far month futures based on the maturity date. The findings indicate no relationship between spot and near month, mid month, far month futures of chillies during the study period. The first sheet gives the raw data on Chillies prices, the second sheet provides the data the data on near month futures , mid month futures and far month chillies futures along with logarithmic returns.
DOI: 10.17632/7hy4gp4dvk.1
title: Dynamic softening behavior of Ti-6.5Al-2Sn-4Zr-4Mo-1W-0.2Si alloy with lamellar starting microstructure during hot deformation

description: The true stress-strain data of Ti-6.5Al-2Sn-4Zr-4Mo-1W-0.2Si alloy with lamellar starting structure obtained by carrying a series of isothermal compression tests at temperatures of 850-1030℃ and strain rates of 0.001-10s-1 on the Gleeble-3500 simulator.
DOI: 10.17632/scbbbv2b8d.1
title: Surveys of Local Government Employees in Australia and New Zealand - Planning for Cycling/Bicycling within Local Governments

description: This data is the results set for a survey of local governments in Australia and New Zealand collected online (recruited by email) during 2020. Questions related to perceptions of cycling/bicycling for different transport purposes. Questions include the respondent's own recent cycling activity. Issues in planning for cycling - including cyclist's safety, development of bike plans, perceptions of stakeholders, barriers to cycling and to planning for cycling, are queried. There is one open-ended response field. Note that any information that identifies an individual respondent has been removed to preserve respondents' anonymity. The identities of specific local governments have been replaced with a random code, so that multiple responses from the same local government can be identified. Includes summary statistics tables.
DOI: 10.17632/nyvpd2zrhr.1
title: Survival model database of human digestive system cells exposed to electroporation pulses

description: Cell survival rate of 20 types of human digestive system cell lines after exposure to electroporation pulses.
Relative area ratio of thermal injury during electroporation process: Relative area ratio of TI=S_TI⁄S_total 
Relative area ratio of electric injury: Relative area ratio of EI=S_EI⁄S_total
DOI: 10.17632/n65436ctw7.3
title: A novel proof-of-concept study assessing the lightening effects and safety of malassezin for treatment of facial hyperpigmentation

description: This is the supplementary data for the Research Letter (Journal of the American Academy of Dermatology) DOI: https://doi.org/10.1016/j.jaad.2021.10.008

This data is provided by the authors to give readers additional information about their work.

Purpose
The primary objective of this seminal and first proof-of-concept, double-blind, dose-ranging study was to investigate the efficacy and safety of malassezin, a natural indole metabolite of Malassezia furfur, for mild, moderate, and severe facial hyperpigmentation secondary to photodamage or melasma.

Conclusion
Malassezin is a highly active agonist of the aryl hydrocarbon receptor with key homeostasis functions that may impact the mechanism of pigmentation reduction​ as shown by in vitro testing demonstrating that malassezin is not a tyrosinase inhibitor. The major strength of this investigation is the early onset of lightening visible at weeks 2 and 4 and the maintenance of improvement for 8 weeks after treatment, an outcome that has been rarely reported in other clinical trials.
DOI: 10.17632/55ry8zrs5y.1
title: Management of Pediatric Atopic Dermatitis with Systemic Biologics: An Evidence-Based Review

description: Atopic dermatitis (AD) is a common chronic inflammatory skin disease characterized by typical eczematous morphology and intense pruritus with onset before 5 years of age in up to 90% of cases. The physical and psychosocial burden can have a significant negative impact on quality of life. This systematic review examines the available evidence for systemic biologics in pediatric patients with AD.
DOI: 10.17632/b53g7v47fg.1
title: International experiences and expatriates adjustment in cross-cultural business environment: Insight form Nigeria

description: Data for International experiences and expatriates adjustment in cross-cultural business environment: Insight form Nigeria
DOI: 10.17632/dprrxx3pdb.1
title: Supplemental Figure for JAAD-D-21-01160R1

description: Supplemental Figure for JAAD-D-21-01160R1, Characterization and Treatment of Prominent Facial Vasculature in the Setting of Frontal Fibrosing Alopecia.
DOI: 10.17632/cvky3p7k2d.1
title: Raw data - Data on the investigation of potential anti-urolithiatic activity of Alhagi graecum (Boiss.) grown wild in Al-Ahsa (Eastern Province), Saudi Arabia

description: Excel file of the raw data
DOI: 10.17632/7ykrj6rj6h.1
title: Processed data-Dynamic softening behavior of Ti-6.5Al-2Sn-4Zr-4Mo-1W-0.2Si alloy with lamellar starting microstructure during hot deformation

description: The processed data includes strain-rate sensitivity exponent, deformation activation energy, power dissipation distribution and Poliak-Jonas criterion of Ti-6.5Al-2Sn-4Zr-4Mo-1W-0.2Si alloy corresponding to different deformation parameters. The comparison between predicted flow curves from the constitutive model and experimental true stress-strain curves was presented.