cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/nt5s8ykggr.1
title: Data on the Effect of Seeding and NP fertilizer Rates on Growth and Yield Components of Bread Wheat (Triticum aestivum L.) in Burie District, Northwestern Ethiopia

description: mmmmmThe data article titled "Data on the Effect of Seeding and NP Fertilizer Rates on Growth and Yield Components of Bread Wheat (Triticum aestivum L.) in Burie District, Northwestern Ethiopia" presents valuable information on the impact of seeding rates and NP fertilizer application on the growth and yield components of bread wheat in a specific region. The study conducted in Burie District, Northwestern Ethiopia, provides insights into the optimal practices for enhancing wheat production in this area. By analyzing the data presented in this article, researchers and agricultural practitioners can gain a better understanding of the factors influencing wheat growth and yield, ultimately contributing to improved agricultural practices and increased crop productivity in the region.
DOI: 10.17632/3zhb8jgr8p.1
title: supplementary material

description: the supplementary material of the "Network pharmacology integrated with experimental validation uncover that Secoisolariciresinol Diglucoside ameliorate premature ovarian insufficiency via PI3K/Akt pathway"
DOI: 10.6084/m9.figshare.5787525
title: Information-Based Optimal Subdata Selection for Big Data Linear Regression

description: Extraordinary amounts of data are being produced in many branches of science. Proven statistical methods are no longer applicable with extraordinary large datasets due to computational limitations. A critical step in big data analysis is data reduction. Existing investigations in the context of linear regression focus on subsampling-based methods. However, not only is this approach prone to sampling errors, it also leads to a covariance matrix of the estimators that is typically bounded from below by a term that is of the order of the inverse of the subdata size. We propose a novel approach, termed information-based optimal subdata selection (IBOSS). Compared to leading existing subdata methods, the IBOSS approach has the following advantages: (i) it is significantly faster; (ii) it is suitable for distributed parallel computing; (iii) the variances of the slope parameter estimators converge to 0 as the full data size increases even if the subdata size is fixed, that is, the convergence rate depends on the full data size; (iv) data analysis for IBOSS subdata is straightforward and the sampling distribution of an IBOSS estimator is easy to assess. Theoretical results and extensive simulations demonstrate that the IBOSS approach is superior to subsampling-based methods, sometimes by orders of magnitude. The advantages of the new approach are also illustrated through analysis of real data. Supplementary materials for this article are available online.
DOI: 10.17632/d82hjm4v6r.1
title: NekMesh: An open-source high-order mesh generation framework

description: High-order spectral element simulations are now becoming increasingly popular within the computational modelling community, as they offer the potential to deliver increased accuracy at reduced cost compared to traditional low-order codes. However, to support accurate, high-fidelity simulations in complex industrial applications, there is a need to generate curvilinear meshes which robustly and accurately conform to geometrical features. This is, at present, a key challenge within the mesh generation community, with only a few open-source tools able to generate curvilinear meshes for complex geometries. We present NekMesh: an open-source mesh generation package which is designed to enable the generation of valid, high-quality curvilinear meshes of complex, three-dimensional geometries for performing high-order simulations. We outline the software architecture adopted in NekMesh, which uses a pipeline of processing modules to provide a flexible, CAD-independent high-order mesh processing tool, capable of both generating meshes for a wide range of use cases, as well as post-processing linear meshes from a range of input formats for use with high-order simulations. A number of examples in various application areas are presented, with a particular emphasis on challenging aeronautical and fluid dynamics test cases.
DOI: 10.17632/jjn856gzy9.1
title: Test data of the actual system in Jilin province

description: Test data of the actual system in Jilin province
DOI: 10.6084/m9.figshare.14700447
title: Additional file 2 of Structural comparison of the rostra of two species of weevils coexisting on Ailanthus altissima: the response to ecological demands of egg deposition

description: Additional file 2. Data of elytra length and rostra length of Eucryptorrhynchus scrobiculatus and E. brandti.
DOI: 10.6084/m9.figshare.19419236.v1
title: The mitochondrial genome and phylogenetic position of a conehead katydid <i>Euconocephalus pallidus</i> (Insecta: Orthoptera)

description: The complete mitochondrial genome of a conehead katydid <i>Euconocephalus pallidus</i> was determined. The mitochondrial genome is 15,888 bp in size with an A + T content of 71.67%. It contains 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and a control region. The order and orientation of these genes conform to the ancestral form of insects. Phylogenetic analysis supports a close relationship between <i>E</i>. <i>pallidus</i> and <i>E</i>. <i>nasutus</i>.
DOI: 10.6084/m9.figshare.21516372.v1
title: Association of raised serum progesterone level with ovulation trigger and histology of endometrium in stimulated cycles

description: Abstract This was a forthcoming study of those patients, who undergo in-vitro fertilization (IVF) and freeze-all embryo, who acquiesce for the study. The number of participated patients (n=350) in this study, underwent for IVF. The blood sample was collected from patients to evaluate the level of serum progesterone in vacuum vials on the day of ovulation trigger. After 36 hrs of ovulation trigger, ovum picked up was done. Quantitative methods were used to estimate the level of serum progesterone through the electrochemiluminescence immunoassay and correlation of serum progesterone with embryo transfer (ET) outcomes. Main outcome of this current study was to evaluate the value of mean serum progesterone level i.e.0.868± 0.712 ng/ml and 0.88±0.723 ng/ml was found in case of pregnancy positive and negative respectively, at p=0.216 value. In antagonist (n=40) and agonist (n=310) cases, it was 8(20%) and 37(11.94%) PL occurrence was noted at p=0.143 respectively. An overall value of the premature lutenization (PL) occurrences was 13.63% and 15.25% observed in both positive and negative cases of pregnancy at p=0.216 respectively. This study concluded that 12.66% of PL occurrences were recorded in the case of IVF. Study results proved, there were no significant effect of PL on pregnancy outcomes.
DOI: 10.6084/m9.figshare.19419236
title: The mitochondrial genome and phylogenetic position of a conehead katydid <i>Euconocephalus pallidus</i> (Insecta: Orthoptera)

description: The complete mitochondrial genome of a conehead katydid <i>Euconocephalus pallidus</i> was determined. The mitochondrial genome is 15,888 bp in size with an A + T content of 71.67%. It contains 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and a control region. The order and orientation of these genes conform to the ancestral form of insects. Phylogenetic analysis supports a close relationship between <i>E</i>. <i>pallidus</i> and <i>E</i>. <i>nasutus</i>.
DOI: 10.6084/m9.figshare.21516372
title: Association of raised serum progesterone level with ovulation trigger and histology of endometrium in stimulated cycles

description: Abstract This was a forthcoming study of those patients, who undergo in-vitro fertilization (IVF) and freeze-all embryo, who acquiesce for the study. The number of participated patients (n=350) in this study, underwent for IVF. The blood sample was collected from patients to evaluate the level of serum progesterone in vacuum vials on the day of ovulation trigger. After 36 hrs of ovulation trigger, ovum picked up was done. Quantitative methods were used to estimate the level of serum progesterone through the electrochemiluminescence immunoassay and correlation of serum progesterone with embryo transfer (ET) outcomes. Main outcome of this current study was to evaluate the value of mean serum progesterone level i.e.0.868± 0.712 ng/ml and 0.88±0.723 ng/ml was found in case of pregnancy positive and negative respectively, at p=0.216 value. In antagonist (n=40) and agonist (n=310) cases, it was 8(20%) and 37(11.94%) PL occurrence was noted at p=0.143 respectively. An overall value of the premature lutenization (PL) occurrences was 13.63% and 15.25% observed in both positive and negative cases of pregnancy at p=0.216 respectively. This study concluded that 12.66% of PL occurrences were recorded in the case of IVF. Study results proved, there were no significant effect of PL on pregnancy outcomes.
DOI: 10.6084/m9.figshare.21516270
title: Salidroside induced repair of myocardial infarction through Nrf2/HO-1

description: Abstract Salidroside (SAL) has been confirmed to have some protective effects against inflammatory injury. However, little information was established as to the mechanism of these protective effects. To this effect, we designed this study to explore the protective effects and mechanisms of SAL against myocardial infarction (MI). A rat MI model was established and divided into five groups (n = 6): sham, MI, MI+SAL, MI+ LY294002 (PI3K inhibitor), and MI+SAL+ LY294002. The cardiac function and histological pathology were analyzed with a color Doppler ultrasonic diagnostic instrument. Anti-oxidative enzyme activities and the production of inflammatory media were assayed by biochemical kits and ELISA. MI size and fibrosis were assayed by Masson’s trichrome staining while Bax/Bcl-2 and PI3K/Akt/Nrf2/HO-1 were assayed by Western blotting and immunofluorescence. The results showed that SAL significantly improved the left ventricle ejection fraction and fractional shortening, decreased the MI size and fibrosis, inhibited apoptosis and promoted blood vessel formation. SAL promoted anti-oxidative and anti-inflammatory abilities. Moreover, SAL enhanced PI3K/ Akt/Nrf2/HO-1 expression. To this effect, we designed this study suggested that SAL induced repair of MI via PI3K/A kt/ Nrf2/HO-1.
DOI: 10.6084/m9.figshare.14176114.v1
title: Additional file 13 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 13. KEGG pathway enrichment of the significantly downregulated proteins in HEC_vs_HEA.
DOI: 10.6084/m9.figshare.14176123.v1
title: Additional file 16 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 16. The primer sequences for real-time quantitative RT-PCR. 18 s rRNA was used as reference genes.
DOI: 10.17632/h6hmstft9m.1
title: Investigation of Amasya Traditional Houses with Basic Design Principles in the Context of Sustainability

description: The 18th century, marked by the Industrial Revolution, disrupted the balance between humans and nature, giving rise to environmental challenges. Unplanned urbanization, rapid technological progress, and intensive fossil fuel use emphasized the need for harmonious coexistence with nature. In the 20th century, sustainable architecture emerged to address issues like environmental pollution and excessive energy consumption. This approach incorporates design principles considering land and climate data, utilizing renewable energy sources. The alignment of design with the natural environment dates back much earlier. Traditional houses, with centuries of construction and settlement experience, endure by providing environmentally harmonious solutions, reflecting unique lifestyles, cultures, traditions, and customs. Traditional architecture, a prominent manifestation of ecological principles, offers sustainable solutions to contemporary environmental challenges.
The study aims to explore the relationship between sustainable- traditional architecture, focusing on symmetry, rhythm, balance, and contrast. Basic design principles play a facilitating and guiding role in the regulatory process. Five traditional houses from the Sofular District in Amasya, showcasing traditional architectural characteristics and preserving the unique texture, serve as examples. The evaluation of Sofular District Traditional Houses' sustainability aims to highlight similarities and differences in traditional architectural formations within the sample group, based on established design inputs and analysis criteria.
DOI: 10.17632/h9sdxdys5d.1
title: Supplementary materials for article titled “An Orally Efficacious Thyrotropin Receptor Ligand Inhibits Growth and Metastatic Activity of Thyroid Cancers”

description: This is the supplementary material associated with the article entitles "An Orally Efficacious Thyrotropin Receptor Ligand Inhibits Growth and Metastatic Activity of Thyroid Cancers". The file contains methods for the synthesis of materials used in the study, along with initial screening experiments. Weights of mice used in in vivo experiments and analysis of blood plasma collected at the termination of the study are also included in the material. There are results and figure files for all the experiments mentioned above.
DOI: 10.6084/m9.figshare.13126571
title: Additional file 2 of Pan-cancer analysis of differential DNA methylation patterns

description: Additional file 2 Table S4. PanDM cluster membership for the 396,065 CpG sites. (TXT)
DOI: 10.6084/m9.figshare.5263636
title: Hodgkin lymphoma in children, adolescents and young adults – a comparative study of clinical presentation and treatment outcome

description: <b>Background:</b> Hodgkin lymphoma (HL) treatment protocols for children, adolescents and young adults traditionally differ, but the biological and clinical justification for this remains uncertain. <b>Material and methods:</b> We compared age-dependent clinical presentation and treatment and outcome for 1072 classical HL patients 0–24 years diagnosed in Denmark (1990–2010) and Sweden (1992–2009) in pediatric (<i>n</i> = 315, Denmark &lt;15 years, Sweden &lt;18 years) or adult departments (<i>n</i> = 757). Distribution of clinical characteristics was assessed with Pearson’s chi<sup>2</sup>-test and Mantel–Haenszel trend test. The Kaplan–Meier method was used for survival analyses. Hazard ratios (HR) were used to compare the different treatment groups and calculated using Cox regression. <b>Results:</b> Children (0–9 years) less often presented with advanced disease than adolescents (10–17 years) and young adults (18–24 years) (stage IIB-IV: children 32% vs. adolescents 50%, and adults 55%; <i>p</i> &lt; .005). No variation in overall survival (OS) was seen between pediatric and adult departments or by country. Danish pediatric patients received radiotherapy (36%) less frequently than Swedish pediatric patients (71%) (<i>p</i> &lt; .0001). Ten-year event-free survival (EFS) was lower among Danish pediatric patients (0–14 years) (0.79; 95% confidence interval (CI) 0.70–0.86) than among Swedish pediatric patients (0–17 years) (0.88; 95% CI 0.83–0.92), HR (1.93; 95% CI 1.08–3.46). A similar pattern was seen between adult patients in the two countries: Denmark 10-year EFS 0.85 (95% CI 0.81–0.88), Sweden 0.88 (95% CI 0.84–0.91), adjusted HR 1.51 (95% CI 1.03–2.22). <b>Conclusion:</b> Adolescents and young adults shared similar clinical presentation suggesting a rationale of harmonized treatment for these groups. Both adult and pediatric protocols provided high OS with no significant difference between the departments. The less frequent use of radiotherapy in Danish pediatric patients corresponded to a lower EFS, but comparable OS in all groups confirmed effective rescue strategies for the relapsing patients.
DOI: 10.6084/m9.figshare.14176162
title: Additional file 8 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 8. The significantly expressed proteins of the comparison group of HEB_vs_HEA.
DOI: 10.6084/m9.figshare.21516362.v1
title: Collapse Resistance Model and Deformation Mechanism of Shear Wall Replacement

description: Abstract Structural elements can be damaged or defective due to man-made and natural disasters, which will result in structural resistance below the design value. Component replacement can effectively improve the safety of the structure and does not affect its later use. However, this construction process must dismantle defective components. If the process is not properly operated, it will cause progressive collapse of the structure. There are few studies on progressive collapse resistance based on field tests. In this paper, the alternate load path method is used to study the deformation mechanism of reinforced concrete shear wall structures when partial members fail. The maximum vertical displacement and strain of the beam end near the failure walls are obtained, and load transfer laws are analyzed. Based on the component replacement construction of a high-rise shear wall structure, the progressive collapse resistance mechanism of the shear wall structure is verified, which provides theoretical guidance for component replacement construction.
DOI: 10.17632/g97sn2t8z2.1
title: The QISG suite: High-performance codes for studying quantum Ising spin glasses

description: We release a set of GPU programs for the study of the Quantum (S = 1/2) Spin Glass on a square lattice, with binary couplings. The library contains two main codes: MCQSG (that carries out Monte Carlo simulations using both the Metropolis and the Parallel Tempering algorithms, for the problem formulated in the Trotter-Suzuki approximation), and EDQSG (that obtains the extremal eigenvalues of the Transfer Matrix using the Lanczos algorithm). EDQSG has allowed us to diagonalize transfer matrices with size up to 2^36 x 2^36. From its side, MCQSG running on four NVIDIA A100 cards delivers a sub-picosecond time per spin-update, a performance that is competitive with dedicated hardware. We include as well in our library GPU programs for the analysis of the spin configurations generated by MCQSG. Finally, we provide two auxiliary codes: the first generates the lookup tables employed by the random number generator of MCQSG; the second one simplifies the execution of multiple runs using different input data.
DOI: 10.6084/m9.figshare.14176165.v1
title: Additional file 9 of Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus

description: Additional file 9. The significantly expressed proteins of the comparison group of HEC_ vs_HEA.
DOI: 10.6084/m9.figshare.21516270.v1
title: Salidroside induced repair of myocardial infarction through Nrf2/HO-1

description: Abstract Salidroside (SAL) has been confirmed to have some protective effects against inflammatory injury. However, little information was established as to the mechanism of these protective effects. To this effect, we designed this study to explore the protective effects and mechanisms of SAL against myocardial infarction (MI). A rat MI model was established and divided into five groups (n = 6): sham, MI, MI+SAL, MI+ LY294002 (PI3K inhibitor), and MI+SAL+ LY294002. The cardiac function and histological pathology were analyzed with a color Doppler ultrasonic diagnostic instrument. Anti-oxidative enzyme activities and the production of inflammatory media were assayed by biochemical kits and ELISA. MI size and fibrosis were assayed by Masson’s trichrome staining while Bax/Bcl-2 and PI3K/Akt/Nrf2/HO-1 were assayed by Western blotting and immunofluorescence. The results showed that SAL significantly improved the left ventricle ejection fraction and fractional shortening, decreased the MI size and fibrosis, inhibited apoptosis and promoted blood vessel formation. SAL promoted anti-oxidative and anti-inflammatory abilities. Moreover, SAL enhanced PI3K/ Akt/Nrf2/HO-1 expression. To this effect, we designed this study suggested that SAL induced repair of MI via PI3K/A kt/ Nrf2/HO-1.
DOI: 10.6084/m9.figshare.5263636.v1
title: Hodgkin lymphoma in children, adolescents and young adults – a comparative study of clinical presentation and treatment outcome

description: <b>Background:</b> Hodgkin lymphoma (HL) treatment protocols for children, adolescents and young adults traditionally differ, but the biological and clinical justification for this remains uncertain. <b>Material and methods:</b> We compared age-dependent clinical presentation and treatment and outcome for 1072 classical HL patients 0–24 years diagnosed in Denmark (1990–2010) and Sweden (1992–2009) in pediatric (<i>n</i> = 315, Denmark &lt;15 years, Sweden &lt;18 years) or adult departments (<i>n</i> = 757). Distribution of clinical characteristics was assessed with Pearson’s chi<sup>2</sup>-test and Mantel–Haenszel trend test. The Kaplan–Meier method was used for survival analyses. Hazard ratios (HR) were used to compare the different treatment groups and calculated using Cox regression. <b>Results:</b> Children (0–9 years) less often presented with advanced disease than adolescents (10–17 years) and young adults (18–24 years) (stage IIB-IV: children 32% vs. adolescents 50%, and adults 55%; <i>p</i> &lt; .005). No variation in overall survival (OS) was seen between pediatric and adult departments or by country. Danish pediatric patients received radiotherapy (36%) less frequently than Swedish pediatric patients (71%) (<i>p</i> &lt; .0001). Ten-year event-free survival (EFS) was lower among Danish pediatric patients (0–14 years) (0.79; 95% confidence interval (CI) 0.70–0.86) than among Swedish pediatric patients (0–17 years) (0.88; 95% CI 0.83–0.92), HR (1.93; 95% CI 1.08–3.46). A similar pattern was seen between adult patients in the two countries: Denmark 10-year EFS 0.85 (95% CI 0.81–0.88), Sweden 0.88 (95% CI 0.84–0.91), adjusted HR 1.51 (95% CI 1.03–2.22). <b>Conclusion:</b> Adolescents and young adults shared similar clinical presentation suggesting a rationale of harmonized treatment for these groups. Both adult and pediatric protocols provided high OS with no significant difference between the departments. The less frequent use of radiotherapy in Danish pediatric patients corresponded to a lower EFS, but comparable OS in all groups confirmed effective rescue strategies for the relapsing patients.
DOI: 10.17632/mp8tf2dz67.1
title: Two-dimensional helium-like atom in a homogeneous magnetic field: Numerically exact solutions

description: A two-dimensional helium atom (2D-helium) is a real subject for current studies, particularly regarding a hot topic of negatively charged excitons (trions) in semiconducting monolayers. The present study considers a 2D-helium-like atom in a homogeneous magnetic field. We are able to rewrite its Schrödinger equation into a polynomial form concerning dynamic variables. This form is useful for utilizing the algebraic calculation by annihilation and creation operators, enabling the successful application of the Feranchuk-Komarov (FK) operator method to obtain numerically exact solutions (energies and wave functions) for this system. The polynomialization of the equation allows obtaining analytical expressions of all matrix elements, which saves the computational resources significantly. Numerical results for the case without a magnetic field are comparable to other calculations. Moreover, the precise separation of the center-of-mass motion, as provided in this study, leads to an equation for the relative motion of the electrons in a magnetic field, incorporating all previously neglected terms. This result is useful for further study of trions where the electron effective mass is comparable with the hole effective mass. Additionally, we provide a FORTRAN program designed to solve the problems above.