cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29617913.v1
title: Supplementary Material for: Mitochondrial Glycosylation in Neuroinflammation Models

description: Introduction: Mitochondria are cellular energy factories, but their function declines with age in many tissues as well as disease pathophysiology. Mitochondrial proteins have sugar modifications called glycans, which regulate their function and localization. There is a knowledge gap on the impact of mitochondrial protein glycosylation on mitochondrial function and mediating neuroinflammation. We hypothesize that stimuli-specific neuroinflammatory treatments in microglia induce pathological changes in mitochondrial protein glycosylation and compromise mitochondrial function. 

Methods: The aim of this study was to establish a detailed microglial mitochondrial glycoprofile in different models of inflammation using lectins to identify the glycan-based markers of mitochondrial dysfunction. We use three different pathways of microglial activation: lipopolysaccharide (LPS), cytokines, and oxygen-glucose deprivation (OGD), revealing differences in mitochondrial glycosylation in different models of inflamed microglia. Mitochondrial lectin blots and lectin flow analysis were used to quantify the glycosylation changes due to different neuroinflammatory conditions. Seahorse Mito Stress assay was performed to assess mitochondrial function in each of these conditions.

Results: Lectin immunoblots of mitochondrial proteins and lectin flow studies with intact mitochondria were performed in three different neuroinflammation models using BV-2 microglial cells, revealing considerable stimuli-specific, differential mitochondrial glycosylation between these models and healthy controls. It was found that several glycans associated with mitochondria were differentially regulated during microglial activation. The observed changes in glycosylation trends were more drastic in OGD treatment as compared to other treatments, especially for complex and sialylated glycans. 

Conclusion: This study represents the first functional investigation of mitochondrial glycosylation in microglial inflammation models towards identifying glycosylation-based therapeutic targets.
DOI: 10.15468/dl.rjwndv
title: Occurrence Download

description: A dataset containing 462 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coreopsis delphiniifolia"
 ]
}

 The dataset includes 462 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028056-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28848170
title: Measurement data of "Deciphering mixed self-assembled monolayers on metal oxide nanoparticle surfaces"

description: Analysis of the surface stoichiometry of mixed phosphonic acid based self-assembled monolayers on metal oxide nanoparticle using FTIR-ATR and TGA.
DOI: 10.6084/m9.figshare.28848170.v1
title: Measurement data of "Deciphering mixed self-assembled monolayers on metal oxide nanoparticle surfaces"

description: Analysis of the surface stoichiometry of mixed phosphonic acid based self-assembled monolayers on metal oxide nanoparticle using FTIR-ATR and TGA.
DOI: 10.6084/m9.figshare.29617916
title: Supplementary Material for: Assessing exposure to childhood adversity in adults: A systematic review of validated self-report childhood adversity questionnaires

description: Children exposed to adverse experiences (ACEs) are more likely to experience mental health problems in adulthood. However, ACE assessment is highly heterogeneous, hampering widespread screening and trauma-informed care provision. We aimed to systematically identify and critically evaluate all validated, self-report ACE questionnaires, working with people with lived experience (PWLE). The review followed PRISMA guidelines to systematically search databases for validated self-report measures, completed by adults, assessing at least two ACEs. Articles were excluded if they were not written in English, were not original articles, assessed poor childhood health or adverse experiences happening in adulthood, and/or only assessed one ACE. Psychometric properties were evaluated using Cohen’s criteria for evidence-based assessments, the COSMIN checklist, and a content validity form co-designed with PWLE. We identified 112 eligible studies covering 31 ACE questionnaires. Cohen’s criteria classified 9 questionnaires as “well-established” and 2 as “approaching well-established”. No questionnaire was rated as “sufficient” quality across all the COSMIN measurement properties. The ACE Study-questionnaire, Childhood Experiences Survey (CES) and the ACE-International Questionnaire had the highest number of properties rated as sufficient. The Childhood Trauma Questionnaire-Short Form (CTQ-SF) was most frequently evaluated but received “insufficient” ratings across all measurement properties. PWLE scored content validity highest for the CES. Consequently, no ACE questionnaires received good psychometric ratings, with the most widely used questionnaire (CTQ-SF) not performing well, which has implications for selecting an appropriate instrument. With increasing emphasis on trauma-informed health care, there is an urgent need to co-develop ACE questionnaires with PWLE to balance content validity with usability.
DOI: 10.6084/m9.figshare.29617916.v1
title: Supplementary Material for: Assessing exposure to childhood adversity in adults: A systematic review of validated self-report childhood adversity questionnaires

description: Children exposed to adverse experiences (ACEs) are more likely to experience mental health problems in adulthood. However, ACE assessment is highly heterogeneous, hampering widespread screening and trauma-informed care provision. We aimed to systematically identify and critically evaluate all validated, self-report ACE questionnaires, working with people with lived experience (PWLE). The review followed PRISMA guidelines to systematically search databases for validated self-report measures, completed by adults, assessing at least two ACEs. Articles were excluded if they were not written in English, were not original articles, assessed poor childhood health or adverse experiences happening in adulthood, and/or only assessed one ACE. Psychometric properties were evaluated using Cohen’s criteria for evidence-based assessments, the COSMIN checklist, and a content validity form co-designed with PWLE. We identified 112 eligible studies covering 31 ACE questionnaires. Cohen’s criteria classified 9 questionnaires as “well-established” and 2 as “approaching well-established”. No questionnaire was rated as “sufficient” quality across all the COSMIN measurement properties. The ACE Study-questionnaire, Childhood Experiences Survey (CES) and the ACE-International Questionnaire had the highest number of properties rated as sufficient. The Childhood Trauma Questionnaire-Short Form (CTQ-SF) was most frequently evaluated but received “insufficient” ratings across all measurement properties. PWLE scored content validity highest for the CES. Consequently, no ACE questionnaires received good psychometric ratings, with the most widely used questionnaire (CTQ-SF) not performing well, which has implications for selecting an appropriate instrument. With increasing emphasis on trauma-informed health care, there is an urgent need to co-develop ACE questionnaires with PWLE to balance content validity with usability.
DOI: 10.6084/m9.figshare.29617919
title: Supplementary Material for: Transcapillary PO2 Gradients in Contracting Muscle of Rat Model of Sepsis

description: Objectives: This study aimed to evaluate the effect of cecal ligation and puncture (CLP)-induced sepsis on transcapillary PO2 gradients (ΔPO2) in contracting skeletal muscle. 
Methods: Male Wistar rats (n = 16, 10 weeks old) were randomly assigned to sham or CLP groups. Seven days after surgery, microvascular (PO2mv) and interstitial (PO2is) PO2 levels in the tibialis anterior (TA) muscle were measured using the phosphorescence quenching method during the transition from rest to electrically induced muscle contractions. ΔPO2 was calculated as PO2mv minus PO2is. 
Results: At rest, there were no differences in PO2mv, PO2is, and ΔPO2 between the sham and CLP groups. The PO2mv and PO2is decreased during the transition from rest to contractions in both groups. During muscle contractions, the PO2mv and ΔPO2 were significantly lower in the CLP group than in the sham group (PO2mv, 7.79 ± 5.03 vs. 4.43 ± 2.23; ΔPO2, 5.50 ± 4.46 vs. 1.82 ± 2.66 mmHg; sham vs. CLP; P &lt; 0.05). The ΔPO2 of the rats in the sham group remained unchanged; however, it markedly decreased during muscle contractions in the CLP group. 
Conclusion: Sepsis reduced transcapillary PO2 gradients in contracting skeletal muscles.
DOI: 10.6084/m9.figshare.29617919.v1
title: Supplementary Material for: Transcapillary PO2 Gradients in Contracting Muscle of Rat Model of Sepsis

description: Objectives: This study aimed to evaluate the effect of cecal ligation and puncture (CLP)-induced sepsis on transcapillary PO2 gradients (ΔPO2) in contracting skeletal muscle. 
Methods: Male Wistar rats (n = 16, 10 weeks old) were randomly assigned to sham or CLP groups. Seven days after surgery, microvascular (PO2mv) and interstitial (PO2is) PO2 levels in the tibialis anterior (TA) muscle were measured using the phosphorescence quenching method during the transition from rest to electrically induced muscle contractions. ΔPO2 was calculated as PO2mv minus PO2is. 
Results: At rest, there were no differences in PO2mv, PO2is, and ΔPO2 between the sham and CLP groups. The PO2mv and PO2is decreased during the transition from rest to contractions in both groups. During muscle contractions, the PO2mv and ΔPO2 were significantly lower in the CLP group than in the sham group (PO2mv, 7.79 ± 5.03 vs. 4.43 ± 2.23; ΔPO2, 5.50 ± 4.46 vs. 1.82 ± 2.66 mmHg; sham vs. CLP; P &lt; 0.05). The ΔPO2 of the rats in the sham group remained unchanged; however, it markedly decreased during muscle contractions in the CLP group. 
Conclusion: Sepsis reduced transcapillary PO2 gradients in contracting skeletal muscles.
DOI: 10.6084/m9.figshare.29617823
title: Data used in <b><i>"</i></b><b><i>Climate change differentially affects horn growth through regional vegetation change in an alpine ungulate</i></b><b><i>"</i></b>

description: Data used in <b><i>"</i></b><b><i>Climate change differentially affects horn growth through regional vegetation change in an alpine ungulate</i></b><b><i>"</i></b>
DOI: 10.6084/m9.figshare.29617823.v1
title: Data used in <b><i>"</i></b><b><i>Climate change differentially affects horn growth through regional vegetation change in an alpine ungulate</i></b><b><i>"</i></b>

description: Data used in <b><i>"</i></b><b><i>Climate change differentially affects horn growth through regional vegetation change in an alpine ungulate</i></b><b><i>"</i></b>
DOI: 10.15468/dl.nxrbzc
title: Occurrence Download

description: A dataset containing 146 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hedera helix",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 146 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028058-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z2dhd4
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hedera helix",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028059-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.efntqh
title: Occurrence Download

description: A dataset listing the 83395 species recorded in GBIF matching the query:
{
 "Country" : [
 "is Portugal"
 ]
}

 The dataset's 83395 records were derived from 2232 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028039-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.29f49f
title: Occurrence Download

description: A dataset containing 9562 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Bostrichus pityographus Ratzeburg, 1837, Placynthiella icmalea (Ach.) Coppins & P.James)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 9562 records from 153 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0359451-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112045101
title: Cuneiform Tablet 1913.14.0169, Spurlock 1913.14.0169

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0169; CDLI P420550 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/2) Brownish Pink (5YR 8/3) ❧ [Physical Object Note:] 7.5 x 4.5 x 2.3 cm (82g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.15468/dl.uurxmv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Porifera",
 "DatasetKey is Parkuntersuchung Weißer See",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-25.03991 31.75, 41.65954 31.75, 41.65954 71.53037, -25.03991 71.53037, -25.03991 31.75))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0207991-230224095556074/datasets/export for details.
DOI: 10.15468/dl.ykptst
title: Occurrence Download

description: A dataset listing the 62312 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "BasisOfRecord is one of (Human Observation)"
 ]
}

 The dataset's 62312 records were derived from 1086 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0303203-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112020323
title: Cuneiform Tablet 1913.14.1016, Spurlock 1913.14.1016

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.1016; CDLI P129030 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Moderate Yellowish Pink (5YR 8/4) White (N 9/ 78.7% R) -White discoloration Dark Gray (N 4/ 12.0% R) ❧ [Physical Object Note:] 4.2 x 3.9 x 1.5 cm (34g)
DOI: 10.15468/dl.cpdhpc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Porifera",
 "DatasetKey is Kinderwald Hannover",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-25.03991 31.75, 41.65954 31.75, 41.65954 71.53037, -25.03991 71.53037, -25.03991 31.75))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0207970-230224095556074/datasets/export for details.
DOI: 10.15468/dl.skjba3
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abudefduf lorenzi Hensley & Allen, 1977"
 ]
}

 The dataset includes 105 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052784-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ga5vzz
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-9959.0",
 "OccurrenceStatus is Present",
 "TaxonKey is Pristimantis euphronides (Schwartz, 1967)"
 ]
}

 The dataset includes 45 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0359568-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.npb92m
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Porifera",
 "DatasetKey is Art´n Vielfalt im Kinderwald",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-25.03991 31.75, 41.65954 31.75, 41.65954 71.53037, -25.03991 71.53037, -25.03991 31.75))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0207989-230224095556074/datasets/export for details.
DOI: 10.25549/inscriptifact-ouc112045044
title: Cuneiform Tablet 1913.14.0169, Spurlock 1913.14.0169

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0169; CDLI P420550 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/2) Brownish Pink (5YR 8/3) ❧ [Physical Object Note:] 7.5 x 4.5 x 2.3 cm (82g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.15468/dl.rn2t9x
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cephalophus ogilbyi (Waterhouse, 1838)"
 ]
}

 The dataset includes 92 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0354101-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w8ry77
title: Occurrence Download

description: A dataset containing 3272 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Viola canina L.",
 "MediaType is Image",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 3272 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0409729-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cqs4cj
title: Occurrence Download

description: A dataset containing 865 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Ireland, Svalbard and Jan Mayen, Portugal, Spain, France, Germany, Belgium, Netherlands, Switzerland, Austria, Italy, Greece, Cyprus, Poland, Czechia, Slovakia, Hungary, Albania, Serbia, Romania, Bulgaria, Türkiye, Russian Federation, Belarus)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Limonium humile Mill."
 ]
}

 The dataset includes 865 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065362-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112045045
title: Cuneiform Tablet 1913.14.0169, Spurlock 1913.14.0169

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0169; CDLI P420550 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/2) Brownish Pink (5YR 8/3) ❧ [Physical Object Note:] 7.5 x 4.5 x 2.3 cm (82g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.15468/dl.rnt35w
title: Occurrence Download

description: A dataset containing 20878 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Plagiobryum demissum (Hook.) Lindb., Plagiothecium curvifolium Schlieph. ex Limpr., Plagiothecium denticulatum (Hedw.) Schimp.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 20878 records from 191 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0359455-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yzrawh
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euodia whitmorei T.G.Hartley"
 ]
}

 The dataset includes 27 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0207972-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112019888
title: Cuneiform Tablet 1913.14.0257, Spurlock 1913.14.0257

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0257; CDLI P420639 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Moderate Yellowish Pink (5YR 7/4) ❧ [Physical Object Note:] 4.5 x 4.3 x 1.5 cm (66g) ❧ [Physical Object Note:] Seal impressions