cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/ctbe9-kc586
title: Xanthomonas vs Caulobac (-T1SS)

description: Xac WT pBRaφ pBRR MCS5 GFP (code 9) vs Caulobacter (delta-cdzAB) competition. Caulobacter strain is a T1SS deletion strain.
description: <strong>Tilt Series Date:</strong> 2017-10-27</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Xanthomonas citri</p>
<strong>Strain:</strong> pv citri 306</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -7.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> TOMO3D</p>
<strong>Collaborators and Roles:</strong> Chuck Farah lab made the Xac strain, Caulobacter strain is from Laub lab. Data collected and processed by Mohammed Kaplan and Debnath Ghosal</p>
<strong>Purification / Growth Conditions / Treatment:</strong> 4 µL mixture of Xac and Caulobacter cells were pipetted on top of Au-Finder grids. These grids were glow discharged in advance and kept on top of Agar pads. Carbon side up. These were then kept at the BSL-II hood and left for about 10 min before freezing.</p>
<strong>Sample Preparation:</strong> Manual blotting, humidity 100%</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-10-27-14/rawdata/</p>Xan_CaulDelT1_20172710g0002.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.7 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        Xan_CaulDelT1_20172710g0002_SIRT_1k.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
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        Xan_CaulDelT1_20172710g0002.ali,  342.1 MB  
        
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        Xan_CaulDelT1_20172710g0002.tlt,  384.0 B  
        
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        Xan_CaulDelT1_20172710g0002_fid.tlt,  384.0 B  
        
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DOI: 10.22002/aeb8z-0tp16
title: Xanthomonas vs Caulobac (-T1SS)

description: Xac WT pBRaφ pBRR MCS5 GFP (code 9) vs Caulobacter (delta-cdzAB) competition. Caulobacter strain is a T1SS deletion strain.
description: <strong>Tilt Series Date:</strong> 2017-10-31</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -7.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> TOMO3D</p>
<strong>Collaborators and Roles:</strong> Chuck Farah lab made the Xac strain, Caulobacter strain is from Laub lab. Data collected and processed by Mohammed Kaplan and Debnath Ghosal</p>
<strong>Purification / Growth Conditions / Treatment:</strong> 4 µL mixture of Xac and Caulobacter cells were pipetted on top of Au-Finder grids. These grids were glow discharged in advance and kept on top of Agar pads. Carbon side up. These were then kept at the BSL-II hood and left for about 10 min before freezing.</p>
<strong>Sample Preparation:</strong> Manual blotting, humidity 100%. 10 nm gold in 5% BSA. 4 ul Gold was applied onto the grid and blotted manually.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-10-31-99/rawdata/</p>Xan_CaulDelT1_20172710m0014.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.7 GB  
        
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        Xan_CaulDelT1_20172710m0014_SIRT_1k.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
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        Xan_CaulDelT1_20172710m0014.ali,  377.7 MB  
        
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        Xan_CaulDelT1_20172710m0014.tlt,  424.0 B  
        
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        Xan_CaulDelT1_20172710m0014_fid.tlt,  424.0 B  
        
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DOI: 10.22002/asxf3-hx629
title: Mega gas vesicles

description: Mega gas vesicles, purified from E. coli, -1 to -5 micron defocus. Reconstruct with included scripts for ctf-corrected bin1 tomogram.
description: <strong>Tilt Series Date:</strong> 2019-09-25</p>
<strong>Data Taken By:</strong> LaurenAnn Metskas</p>
<strong>Species / Specimen:</strong> Bacillus megaterium</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-42.0°, 45.0°), step: 3°, constant angular increment, dosage: 70.0 eV/Å²,  defocus: 0.0 μm,  magnification: 81000x. </p>
<strong>Microscope:</strong> None</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> IMOD 4.9.8, ctffind4, custom scripts</p>
<strong>Collaborators and Roles:</strong> purified by Rob Hurt and George Lu from the Shapiro lab at Caltech; data collected by Lauren Ann Metskas; data processed by Lauren Ann Metskas with assistance from Przemek Dutka</p>
<strong>Purification / Growth Conditions / Treatment:</strong> purified Mega gas vesicles in 10 mM HEPES</p>
<strong>Sample Preparation:</strong> protochips C-flat 2/2-300 grid, 10nm BSA-gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lma2019-09-25-18/rawdata/</p>17_dose-filt.st,  Tilt Series (Pixel Size 0.1104 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lma2019-09-25-18/rawdata/17_dose-filt.st"
        > <i class="download icon"></i> Download </a></p>

        17_dose-filt.rec,  Reconstruction (Pixel Size 0.8832 nm), 368.6 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        TS_17.mrc.mdoc,  28.1 kB  
        
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        frames.tar.bz2,  zipped raw frames, 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lma2019-09-25-18/file_27732/frames.tar.bz2"
        > <i class="download icon"></i> Download </a></p>

        scripts.tar.bz2,  zipped processing scripts, 24.8 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lma2019-09-25-18/file_27733/scripts.tar.bz2"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.2e56wz
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gulaphallus panayensis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033018-250811113504898/datasets/export for details.
DOI: 10.22002/0br31-0j723
title: Xanthomonas vs Caulobac (-T1SS)

description: Xac WT pBRaφ pBRR MCS5 GFP (code 9) vs Caulobacter (delta-cdzAB) competition. Caulobacter strain is a T1SS deletion strain.
description: <strong>Tilt Series Date:</strong> 2017-10-27</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Xanthomonas citri</p>
<strong>Strain:</strong> pv citri 306</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -7.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> TOMO3D</p>
<strong>Collaborators and Roles:</strong> Chuck Farah lab made the Xac strain, Caulobacter strain is from Laub lab. Data collected and processed by Mohammed Kaplan and Debnath Ghosal</p>
<strong>Purification / Growth Conditions / Treatment:</strong> 4 µL mixture of Xac and Caulobacter cells were pipetted on top of Au-Finder grids. These grids were glow discharged in advance and kept on top of Agar pads. Carbon side up. These were then kept at the BSL-II hood and left for about 10 min before freezing.</p>
<strong>Sample Preparation:</strong> Manual blotting, humidity 100%</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-10-27-35/rawdata/</p>Xan_CaulDelT1_20172710i0002.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.7 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        Xan_CaulDelT1_20172710i0002_SIRT_1k.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        Xan_CaulDelT1_20172710i0002.ali,  342.1 MB  
        
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        Xan_CaulDelT1_20172710i0002.tlt,  384.0 B  
        
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        Xan_CaulDelT1_20172710i0002_fid.tlt,  384.0 B  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.333m46
title: Occurrence Download

description: A dataset containing 2705282 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coreopsis lanceolata, Cyclachaena xanthiifolia, Mimosa invisa, Sesbania cannabina, Richardia brasiliensis, Hyptis brevipes, Hibiscus trionum, Ipomoea hederacea, Ipomoea nil, Lonchura malacca, Solanum sisymbriifolium, Alocasia cucullata, Spathoglottis plicata, Gloriosa superba, Mikania cynanchifolia, Bauhinia monandra, Stylosanthes guianensis, Ocimum gratissimum, Passiflora maliformis, Operculina turpethum, Pinus caribaea, Xylosandrus morigerus, Caladium bicolor, Calophyllum inophyllum, Bursatella leachii, Symphyotrichum salignum, Croton hirtus, Amaranthaceae, Macaca fascicularis, Callisia repens, Bothriochloa pertusa, Hylocereus undatus, Ceratophyllum demersum, Delonix regia, Derris elliptica, Russelia equisetiformis, Castilla elastica, Citrus aurantiifolia, Halophila stipulacea, Mesembryanthemum cordifolium, Diabrotica virgifera, Echinochloa oryzoides, Sisymbrium loeselii, Populus canadensis, Oxalis dillenii, Prunus cerasifera, Lycium barbarum, Pinus strobus, Hemigrapsus takanoi, Pseudodactylogyrus anguillae)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation)",
 "HasCoordinate is true",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 2705282 records from 3566 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032967-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kccm3e
title: Occurrence Download

description: A dataset containing 6314 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Dichaea Lindl."
 ]
}

 The dataset includes 6314 records from 246 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030945-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17898/adp_mppv22_v1
title: Mediji in predšolski otroci v Sloveniji, 2022
title: Media and preschool children in Slovenia, 2022
DOI: 10.17898/adp_mp20_v1
title: Medijska pismenost 2020
title: Media Literacy 2020
DOI: 10.5066/p1be5qrr
title: Understanding mechanisms for Brook Trout persistence in warming streams: what stream temperatures do fish actually experience?

description: As stream temperatures increase, cold water adapted brook trout populations are projected to decline. However, there are mechanisms brook trout can use to persist in warming streams. Those mechanisms include acclimation, adaptation, and utilizing cold water refugia in streams where thermal heterogeneity is high. Using implanted temperature recording tags, this study examines individual brook trout thermal habitat experience in cold and warm streams throughout the summer.
DOI: 10.17898/adp_nzg23_v1
title: Slovenska zabavna in narodnozabavna glasba, 2023: Pomeni popularne glasbe za različne generacije poslušalcev
DOI: 10.15468/dl.uygyd9
title: Occurrence Download

description: A dataset containing 868 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Continent is North America",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sceloporus jarrovii Cope, 1875",
 "Year 2005-2025"
 ]
}

 The dataset includes 868 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030947-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17898/adp_valos17_v1
title: Varnost v lokalnih skupnostih, 2017
title: Safety and security in local communities, 2017
DOI: 10.15468/dl.d3cubp
title: Occurrence Download

description: A dataset containing 662 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Monomorium subopacum (Smith, 1858)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 662 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010982-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w2vydy
title: Occurrence Download

description: A dataset containing 17199 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Callospermophilus lateralis (Say, 1823)",
 "Year is greater than or equal to 1950",
 {
 "or" : [
 "GadmGid is USA",
 "GadmGid is CAN",
 "GadmGid is MEX"
 ]
 }
 ]
}

 The dataset includes 17199 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003555-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29093348
title: Table – Stability Study OcryGel vs EyelubPro.xlsx

description: This table summarizes the results of a prospective, controlled, crossover study comparing the in vivo corneal retention of two carbomer-based ophthalmic gels — OcryGel and EyelubPro — in 20 anesthetized dogs. Using Spectral Domain Full-Range Optical Coherence Tomography (SD-OCT), central tear film thickness (CTFT) was measured before and after a single instillation of each product at predefined timepoints: baseline, 1, 5, 10, 15, 30, and 60 minutes. The study aimed to assess and compare the stability of both gels over time.Data were collected in a randomized crossover design, with each dog receiving both treatments under identical conditions. The table includes individual CTFT values (in µm) for each timepoint, as well as group means, standard deviations, and graphical representations of the CTFT evolution curves for both products.<b>File </b><b>contents:</b><br>– One Excel file containing raw CTFT values per dog, per product, per timepoint<br>– Averages, standard deviations, and visual plots of CTFT kinetics<br>– Details on measurement protocol, anesthesia, and OCT acquisition parameters<b>Purpose:</b><br>To quantitatively compare the ocular surface residence time of two veterinary tear supplements, providing evidence-based support for clinical decision-making in canine keratoconjunctival disorders.
DOI: 10.15468/dl.a9staf
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Hydrogaster Kuhlm."
 ]
}

 The dataset includes 143 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003557-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yws6jk
title: Occurrence Download

description: A dataset containing 2598 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Peromyscus nasutus (J.A.Allen, 1891)",
 "Year is greater than or equal to 1950",
 {
 "or" : [
 "GadmGid is USA",
 "GadmGid is CAN",
 "GadmGid is MEX"
 ]
 }
 ]
}

 The dataset includes 2598 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003558-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xrvjw5
title: Occurrence Download

description: A dataset containing 7401 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Hydrolea L."
 ]
}

 The dataset includes 7401 records from 353 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003559-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qmmddg
title: Occurrence Download

description: A dataset containing 3169 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Tamias umbrinus J.A.Allen, 1890",
 "Year is greater than or equal to 1950",
 {
 "or" : [
 "GadmGid is USA",
 "GadmGid is CAN",
 "GadmGid is MEX"
 ]
 }
 ]
}

 The dataset includes 3169 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003561-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jjj2ug
title: Occurrence Download

description: A dataset containing 2777 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is artsprosjektet_53-12_enchytraeidae"
 ]
}

 The dataset includes 2777 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003560-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v4tbk2
title: Occurrence Download

description: A dataset containing 588 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is artsprosjektet_51-14_ophiostomatoid_fungi"
 ]
}

 The dataset includes 588 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003562-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nqaamh
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Austria",
 "TaxonKey is one of (Iris humilis subsp. arenaria (Waldst. & Kit.) Á.Löve & D.Löve, Iris humilis Georgi, Iris arenaria Waldst. & Kit.)"
 ]
}

 The dataset includes 24 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003563-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.