cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.2hkzf9
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucosma cocana Kearfott, 1907",
 {
 "or" : [
 "Country is United States of America",
 "Country is United States",
 "Country is United States of America",
 "Country is Canada",
 "Continent is North America"
 ]
 }
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130105-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aryvxf
title: Occurrence Download

description: A dataset containing 197 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-73.8973411999999996 40.9510199999999998, -73.8973411999999996 40.9522651699999969, -73.8973411999999996 40.9542107600000023, -73.8973411999999996 40.9555337600000016, -73.8973411999999996 40.9573237000000034, -73.8973411999999996 40.9589579900000018, -73.8973411999999996 40.9602031599999989, -73.8973411999999996 40.9612148699999992, -73.8973411999999996 40.9623822200000021, -73.8973411999999996 40.9634717499999965, -73.8973411999999996 40.9646390999999994, -73.8950059999999951 40.9646390999999994, -73.8938384000000070 40.9646390999999994, -73.8918924000000032 40.9646390999999994, -73.8895571999999987 40.9646390999999994, -73.8895571999999987 40.9634717499999965, -73.8895571999999987 40.9619152799999995, -73.8895571999999987 40.9603588100000024, -73.8895571999999987 40.9591914599999996, -73.8895571999999987 40.9571680499999999, -73.8895571999999987 40.9556894099999980, -73.8895571999999987 40.9537438199999997, -73.8895571999999987 40.9528099400000016, -73.8895571999999987 40.9510199999999998, -73.8905691199999950 40.9510199999999998, -73.8926708000000048 40.9510199999999998, -73.8943832799999996 40.9510199999999998, -73.8954730399999988 40.9510199999999998, -73.8973411999999996 40.9510199999999998))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 197 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095388-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qm8u5z
title: Occurrence Download

description: A dataset containing 39966067 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Observation.org, Nature data from around the World",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 39966067 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121535-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vvjcnh
title: Occurrence Download

description: A dataset containing 3117 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Glinus lotoides L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3117 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043277-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/8614888
title: ChestXray 8 Object Detection Yolo and Pascal VOC
DOI: 10.15468/dl.rt3ejf
title: Occurrence Download

description: A dataset containing 173 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-73.8139467000000025 40.9739147000000017, -73.8139467000000025 40.9752469499999989, -73.8139467000000025 40.9769598399999992, -73.8139467000000025 40.9791485399999971, -73.8139467000000025 40.9805759500000022, -73.8139467000000025 40.9830501300000023, -73.8139467000000025 40.9851436599999985, -73.8139467000000025 40.9864759100000029, -73.8139467000000025 40.9877129999999994, -73.8118603500000035 40.9877129999999994, -73.8104378400000058 40.9877129999999994, -73.8083514900000068 40.9877129999999994, -73.8071186500000067 40.9877129999999994, -73.8044632999999948 40.9877129999999994, -73.8044632999999948 40.9855243000000016, -73.8044632999999948 40.9842872199999988, -73.8044632999999948 40.9830501300000023, -73.8044632999999948 40.9813372300000012, -73.8044632999999948 40.9791485399999971, -73.8044632999999948 40.9772453200000015, -73.8044632999999948 40.9758179100000035, -73.8044632999999948 40.9739147000000017, -73.8067393200000055 40.9739147000000017, -73.8089204999999993 40.9739147000000017, -73.8119551900000062 40.9739147000000017, -73.8139467000000025 40.9739147000000017))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 173 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095378-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7y6sud
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Paraboea crassifolia (Hemsl.) B.L.Burtt"
 ]
}

 The dataset includes 50 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022559-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hyxj39
title: Occurrence Download

description: A dataset containing 193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Brachyhypopomus pinnicaudatus (Hopkins, 1991)"
 ]
}

 The dataset includes 193 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095387-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d738aw
title: Occurrence Download

description: A dataset containing 370419 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Lithuania)",
 "BasisOfRecord is one of (Observation, Human Observation, Material sample, Literature Occurrence, Specimen, Unknown evidence, Machine Observation)",
 "Year is greater than or equal to 2010",
 "Year is less than or equal to 2021",
 "HasCoordinate is true"
 ]
}

 The dataset includes 370419 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121541-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kmawkz
title: Occurrence Download

description: A dataset containing 340 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aglaia odorata Lour."
 ]
}

 The dataset includes 340 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008642-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ynbznv
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Weisia controversa",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043300-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10813822
title: Additional information for "Global shortfalls in documented actions to conserve biodiversity"

description: Data, code and workflow to support findings of the paper "Global shortfalls in documented actions to conserve biodiversity". This ZIP folder contains an R project with a workflow to reproduce the results, figures, manuscript and associated supplementary material.

Code

The R code for all processing and analysis is all contained within the 'code' subdirectory. Scripts are numbered to indicate the running order. R markdown code and associated files (e.g. BIB and CSL files) for producing the documents are contained within the 'manuscript' subdirectory. All of the code is also available on GitHub. 

Data

The 'data' subdirectory contains everything needed to run the code as a demo. The original source data is not included because it is not ours to share. The processed data are available, at the path 'data/analysis'. These data are the same as used in the published manscript, thus enabling the results, figures and manuscript to be reproduced.

Figures

Most of the figures are generated by running the code with the data provided. Two figures are provided in the 'figs' subdirectory because they were created semi-manually:



 Figure 4 - the R code produces a CSV file ('figs/Fig4.csv') that was used to manually create Figure 4, first in PowerPoint ('figs/Fig4.pptx') and then exported to PNG ('figs/Fig4.png')

Figure S1 - the code produces the individual schematic diagrams of Figure S1, which were combined together in Inkscape ('figs/FigS1.svg') and then exported to PNG ('figs/FigS1.png')
DOI: 10.15468/dl.nyx75e
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eremophila punctata Chinnock",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 69 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043319-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nkvqdk
title: Occurrence Download

description: A dataset containing 2178 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Helianthus giganteus L."
 ]
}

 The dataset includes 2178 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000554-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f2b5ux
title: Occurrence Download

description: A dataset containing 74 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cichla ocellaris Bloch & Schneider, 1801"
 ]
}

 The dataset includes 74 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095410-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.65xch6
title: Occurrence Download

description: A dataset containing 413 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is Zosterops atriceps G.R.Gray, 1861"
 ]
}

 The dataset includes 413 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085116-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t8pgye
title: Occurrence Download

description: A dataset containing 5642 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-73.8903217000000012 40.9709653999999972, -73.8903217000000012 40.9723811300000023, -73.8903217000000012 40.9732305599999975, -73.8903217000000012 40.9741366200000030, -73.8903217000000012 40.9755523500000010, -73.8903217000000012 40.9769114500000029, -73.8903217000000012 40.9778175100000013, -73.8903217000000012 40.9783838000000031, -73.8887324800000016 40.9783838000000031, -73.8871432499999941 40.9783838000000031, -73.8860080900000042 40.9783838000000031, -73.8846458999999953 40.9783838000000031, -73.8846458999999953 40.9770813299999972, -73.8846458999999953 40.9758921199999975, -73.8846458999999953 40.9752125799999973, -73.8846458999999953 40.9740800000000007, -73.8846458999999953 40.9731172999999984, -73.8846458999999953 40.9724377499999974, -73.8846458999999953 40.9714750600000031, -73.8846458999999953 40.9709653999999972, -73.8861216100000036 40.9709653999999972, -73.8873702799999990 40.9709653999999972, -73.8881649000000067 40.9709653999999972, -73.8893000599999965 40.9709653999999972, -73.8903217000000012 40.9709653999999972))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 5642 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095389-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wtsghd
title: Occurrence Download

description: A dataset containing 230 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 2000-2009",
 "Geometry POLYGON((-6.52039 37.02624,-6.71814 36.78025,-6.28967 35.80623,-5.32288 35.95756,-4.54285 36.25933,-4.46869 36.86737,-4.80652 37.27143,-5.67169 37.50458,-6.52039 37.02624))",
 "HasCoordinate is true",
 "TaxonKey is Lutra lutra (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 230 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042225-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hz7kvx
title: Occurrence Download

description: A dataset containing 13374 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Ireland, United Kingdom of Great Britain and Northern Ireland, Svalbard and Jan Mayen, Norway, Sweden, Finland, Estonia, Latvia, Lithuania, Portugal, Spain, France, Germany, Belgium, Netherlands, Switzerland, Austria, Italy, Greece, Cyprus, Türkiye, Russian Federation, Belarus, Ukraine, Poland, Czechia, Hungary, Slovakia, Romania, Bulgaria, North Macedonia, Albania, Montenegro, Serbia, Kosovo, Bosnia and Herzegovina, Slovenia, Croatia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Scorzoneroides helvetica (Mérat) Holub"
 ]
}

 The dataset includes 13374 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060357-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.smypms
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen"
 ]
 },
 "Geometry POLYGON((-7.01011 38.69906,17.01011 38.69906,17.01011 48.30094,-7.01011 48.30094,-7.01011 38.69906))",
 "HasCoordinate is true",
 "TaxonKey is Chrysotoxum cisalpinum Rondani, 1845",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000555-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7rm9ww
title: Occurrence Download

description: A dataset containing 327690 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lullula arborea (Linnaeus, 1758))",
 "HasCoordinate is true",
 "DecimalLatitude is greater than or equal to 29.93667",
 "DecimalLatitude is less than or equal to 51.91193",
 "DecimalLongitude is greater than or equal to -14.67522",
 "DecimalLongitude is less than or equal to 39.79752",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation)",
 "Year is greater than or equal to 1970",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 327690 records from 1645 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041818-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc1247l1
title: CCDC 987182: Experimental Crystal Structure Determination

description: Related Article: Laura J. McCormick ,  Brendan F. Abrahams,  Berin A. Boughton ,  Martin J. Grannas,  Timothy A. Hudson ,  and Richard Robson|2014|Inorg.Chem.|53|1721|doi:10.1021/ic402860r
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1247m2
title: CCDC 987183: Experimental Crystal Structure Determination

description: Related Article: Laura J. McCormick ,  Brendan F. Abrahams,  Berin A. Boughton ,  Martin J. Grannas,  Timothy A. Hudson ,  and Richard Robson|2014|Inorg.Chem.|53|1721|doi:10.1021/ic402860r
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.17417552
title: A Comprehensive Review of HIV Infection and Acquired Immunodeficiency Syndrome (AIDS)
DOI: 10.5517/cc1247n3
title: CCDC 987184: Experimental Crystal Structure Determination

description: Related Article: Laura J. McCormick ,  Brendan F. Abrahams,  Berin A. Boughton ,  Martin J. Grannas,  Timothy A. Hudson ,  and Richard Robson|2014|Inorg.Chem.|53|1721|doi:10.1021/ic402860r
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1247p4
title: CCDC 987185: Experimental Crystal Structure Determination

description: Related Article: Laura J. McCormick ,  Brendan F. Abrahams,  Berin A. Boughton ,  Martin J. Grannas,  Timothy A. Hudson ,  and Richard Robson|2014|Inorg.Chem.|53|1721|doi:10.1021/ic402860r
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.17417551
title: A Comprehensive Review of HIV Infection and Acquired Immunodeficiency Syndrome (AIDS)
DOI: 10.5517/cc1247q5
title: CCDC 987186: Experimental Crystal Structure Determination

description: Related Article: Laura J. McCormick ,  Brendan F. Abrahams,  Berin A. Boughton ,  Martin J. Grannas,  Timothy A. Hudson ,  and Richard Robson|2014|Inorg.Chem.|53|1721|doi:10.1021/ic402860r
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc1247r6
title: CCDC 987187: Experimental Crystal Structure Determination

description: Related Article: Laura J. McCormick ,  Brendan F. Abrahams,  Berin A. Boughton ,  Martin J. Grannas,  Timothy A. Hudson ,  and Richard Robson|2014|Inorg.Chem.|53|1721|doi:10.1021/ic402860r
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc124pfb
title: CCDC 987611: Experimental Crystal Structure Determination

description: Related Article: Michael R. Azar, Thaddeus T. Boron, Jacob C. Lutter, Connor I. Daly, Kelcie A. Zegalia, Ruthairat Nimthong, Gregory M. Ferrence, Matthias Zeller, Jeff W. Kampf, Vincent L. Pecoraro, Curtis M. Zaleski|2014|Inorg.Chem.|53|1729|doi:10.1021/ic402865p
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc124pgc
title: CCDC 987612: Experimental Crystal Structure Determination

description: Related Article: Michael R. Azar, Thaddeus T. Boron, Jacob C. Lutter, Connor I. Daly, Kelcie A. Zegalia, Ruthairat Nimthong, Gregory M. Ferrence, Matthias Zeller, Jeff W. Kampf, Vincent L. Pecoraro, Curtis M. Zaleski|2014|Inorg.Chem.|53|1729|doi:10.1021/ic402865p
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc124phd
title: CCDC 987613: Experimental Crystal Structure Determination

description: Related Article: Michael R. Azar, Thaddeus T. Boron, Jacob C. Lutter, Connor I. Daly, Kelcie A. Zegalia, Ruthairat Nimthong, Gregory M. Ferrence, Matthias Zeller, Jeff W. Kampf, Vincent L. Pecoraro, Curtis M. Zaleski|2014|Inorg.Chem.|53|1729|doi:10.1021/ic402865p
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.