cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/108572
title: Expendable Probe data collected during research cruise AT18-08 using a Sippican MK12 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7717043
title: Additional file 3: of Are malaria elimination efforts on right track? An analysis of gains achieved and challenges ahead

description: Table S2. Treatment failure rate (median) for P. vivax in malaria endemic countries on the basis of studies after the year 2010. (XLS 60 kb)
DOI: 10.6084/m9.figshare.7717037
title: Additional file 2: of Are malaria elimination efforts on right track? An analysis of gains achieved and challenges ahead

description: Table S1. Treatment failure rate (median) for P. falciparum in malaria endemic countries on the basis of studies after the year 2010. (XLS 71 kb)
DOI: 10.7284/103041
title: Multibeam Echosounder data collected during research cruise AT18-08 using a Kongsberg EM122 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103055
title: Multiplexed data collected during research cruise AT18-09 using a WHOI Calliope instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/108576
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AT18-09 using a Hawaii UHDAS instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7717010
title: Additional file 1: of The effectiveness of non-surgical interventions for common plantar digital compressive neuropathy (Mortonâ s neuroma): a systematic review and meta-analysis

description: Raw results for outcome measures of included studies. (XLSX 22 kb)
DOI: 10.7284/108574
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise AT18-09 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7717010.v1
title: Additional file 1: of The effectiveness of non-surgical interventions for common plantar digital compressive neuropathy (Mortonâ s neuroma): a systematic review and meta-analysis

description: Raw results for outcome measures of included studies. (XLSX 22 kb)
DOI: 10.7284/103042
title: Multibeam Echosounder data collected during research cruise AT18-09 using a Kongsberg EM122 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/108575
title: Singlebeam Echosounder data collected during research cruise AT18-09 using a Knudsen 320B/R instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103056
title: Multiplexed data collected during research cruise AT18-10 using a WHOI Calliope instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/108578
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AT18-10 using a Hawaii UHDAS instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7716578
title: Nesting material enrichment reduces severity of overgrooming-related self-injury in individually housed rats

description: Data underlying an observational study of the prevalence of overgrooming-related self-injury in individually housed rats and the effect of providing nesting material enrichment on the severity of associated lesions.<br>In Figure S1, we also show that individual housing of rats is prevalent in neuroscience research. We examined the research articles published in the Journal of Neuroscience in 2017 because the Journal of Neuroscience is the top neuroscience journal by eigenfactor. We found that for papers that reported using rats and reported housing conditions, approximately 55% used individual housing during experiments.<br>
DOI: 10.7284/108577
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise AT18-10 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7716497
title: The toxicity of coated silver nanoparticles to Daphnia carinata and trophic transfer from alga Raphidocelis subcapitata.xlsx

description: This is a Dataset for the manuscript: "The toxicity of coated silver nanoparticles to Daphnia carinata and trophic transfer from alga Raphidocelis subcapitata:
DOI: 10.6084/m9.figshare.7716500
title: Dacryocystorhinostomy dataset 2019, celis-aguilar et al.

description: Database of dacryocystorrhinostomy patients, who underwent marsupialization of the lacrimal sac.
DOI: 10.6084/m9.figshare.7716497.v1
title: The toxicity of coated silver nanoparticles to Daphnia carinata and trophic transfer from alga Raphidocelis subcapitata.xlsx

description: This is a Dataset for the manuscript: "The toxicity of coated silver nanoparticles to Daphnia carinata and trophic transfer from alga Raphidocelis subcapitata:
DOI: 10.7284/103057
title: Multiplexed data collected during research cruise AT18-11 using a WHOI Calliope instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7716500.v1
title: DCRSPSSFEB2016f10002.csv

description: Database of dacryocystorrhinostomy patients, who underwent marsupialization of the lacrimal sac.
DOI: 10.7284/108581
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AT18-11 using a Hawaii UHDAS instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/108579
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise AT18-11 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7716500.v2
title: Dacryocystorhinostomy database 2019, celis-aguilar et al.

description: Database of dacryocystorrhinostomy patients, who underwent marsupialization of the lacrimal sac.
DOI: 10.6084/m9.figshare.7716431
title: CCDB_1023.jpg

description: Optical section series through a protoplasmic astrocyte in rat hippocampal area CA1 intracellulaly injected Lucifer Yellow and imaged with confocal microscopy
DOI: 10.6084/m9.figshare.7716431.v1
title: CCDB_1023.jpg

description: Optical section series through a protoplasmic astrocyte in rat hippocampal area CA1 intracellulaly injected Lucifer Yellow and imaged with confocal microscopy
DOI: 10.6084/m9.figshare.7716500.v4
title: Dacryocystorhinostomy dataset 2019, celis-aguilar et al.

description: Database of dacryocystorrhinostomy patients, who underwent marsupialization of the lacrimal sac.
DOI: 10.7284/108580
title: Expendable Probe data collected during research cruise AT18-11 using a Sippican MK12 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7716500.v3
title: Dacryocystorhinostomy dataset 2019, celis-aguilar et al.

description: Database of dacryocystorrhinostomy patients, who underwent marsupialization of the lacrimal sac.
DOI: 10.7284/103043
title: Multibeam Echosounder data collected during research cruise AT18-11 using a Kongsberg EM122 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7716374
title: JRC2018F_FAFB_h5

description: Transformations between JRC 2018 Female template and the FAFB EM dataset in an hdf5 format.<br><br>This transform applies to the "v14" version of FAFB.
DOI: 10.7284/103058
title: Multiplexed data collected during research cruise AT18-12 using a WHOI Calliope instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7716299
title: Mosquito illustrations

description: Mosquito illustrations, including anatomical structures, for vector research.<br>Inspired by Snodgrass (1959). <i>The anatomical life of the mosquito. </i>Smithsonian Miscellaneous Collection (8) 139.<br><br>Drawn in Paper Pro (FiftyThree, version 4.2.9) on an iPad Air 2 with an Adonit Mini 3 stylus. Edited in Adobe Photoshop CC (version 20.0.1).
DOI: 10.6084/m9.figshare.7714541
title: Phytoremediation of soil contaminated with imazapic

description: The tolerance of <i>Canavalia ensiformis</i>, <i>Mucuna</i> <i>pruriens</i> and <i>Urochloa</i> <i>brizantha</i> to imazapic is recognized. Since imazapic has a long residual effect in the soil, this work was conducted to investigate the capacity of plant species to decontaminate soils contaminated with imazapic. Four doses of imazapic (0, 87.5, 175 and 350 g ha<sup>-1</sup>) were applied to soil samples, which were later cultivated with <i>C. ensiformis</i>, <i>M. pruriens</i> and <i>U. brizantha</i>. The phytotoxicity, height and dry mass of the tested plants were evaluated. Samples of plant tissue and soil were collected for chemical analysis of the residue. <i>Sorghum bicolor</i> was also used to estimate the residual effect of imazapic by bioassay.
DOI: 10.6084/m9.figshare.7716299.v1
title: Mosquito illustrations

description: Mosquito illustrations, including anatomical structures, for vector research.<br>Inspired by Snodgrass (1959). <i>The anatomical life of the mosquito. </i>Smithsonian Miscellaneous Collection (8) 139.<br><br>Drawn in Paper Pro (FiftyThree, version 4.2.9) on an iPad Air 2 with an Adonit Mini 3 stylus. Edited in Adobe Photoshop CC (version 20.0.1).
DOI: 10.7284/108584
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AT18-12 using a Hawaii UHDAS instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7714541.v2
title: Phytoremediation of soil contaminated with imazapic

description: The tolerance of <i>Canavalia ensiformis</i>, <i>Mucuna</i> <i>pruriens</i> and <i>Urochloa</i> <i>brizantha</i> to imazapic is recognized. Since imazapic has a long residual effect in the soil, this work was conducted to investigate the capacity of plant species to decontaminate soils contaminated with imazapic. Four doses of imazapic (0, 87.5, 175 and 350 g ha<sup>-1</sup>) were applied to soil samples, which were later cultivated with <i>C. ensiformis</i>, <i>M. pruriens</i> and <i>U. brizantha</i>. The phytotoxicity, height and dry mass of the tested plants were evaluated. Samples of plant tissue and soil were collected for chemical analysis of the residue. <i>Sorghum bicolor</i> was also used to estimate the residual effect of imazapic by bioassay.
DOI: 10.7284/108582
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise AT18-12 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7714541.v1
title: Residue.xlsx

description: The tolerance of <i>Canavalia ensiformis</i>, <i>Mucuna</i> <i>pruriens</i> and <i>Urochloa</i> <i>brizantha</i> to imazapic is recognized. Since imazapic has a long residual effect in the soil, this work was conducted to investigate the capacity of plant species to decontaminate soils contaminated with imazapic. Four doses of imazapic (0, 87.5, 175 and 350 g ha<sup>-1</sup>) were applied to soil samples, which were later cultivated with <i>C. ensiformis</i>, <i>M. pruriens</i> and <i>U. brizantha</i>. The phytotoxicity, height and dry mass of the tested plants were evaluated. Samples of plant tissue and soil were collected for chemical analysis of the residue. <i>Sorghum bicolor</i> was also used to estimate the residual effect of imazapic by bioassay.
DOI: 10.7284/108583
title: Expendable Probe data collected during research cruise AT18-12 using a Sippican MK12 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/103044
title: Multibeam Echosounder data collected during research cruise AT18-12 using a Kongsberg EM122 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7713686
title: Ptomacanthus 3D models

description: 3D models of <i>Ptomacanthus anglicus</i>, specimen P.24919a from the Natural History Museum, London, scanned at University of Bristol Life Sciences Department.<br>
DOI: 10.6084/m9.figshare.7713728
title: Supplemental data from: Extracellular Na+ and Orai1 contribute to endothelial wound healing

description: Endothelial migration is necessary for wound healing and angiogenesis. Na<sup>+</sup> has been incriminated as an important cellular signal mediating migration, although the ion channels regulating Na<sup>+</sup> permeation that contribute to migration remain poorly understood. We have shown that Orai1 suppresses both constitutive Na<sup>+</sup> leak and Na<sup>+</sup> entry through store-operated calcium entry channels. Here, we examine the independent and combined contributions of extracellular Na<sup>+</sup> and Orai1 to pulmonary artery endothelial cell (PAEC) wound healing. We found that PAEC monolayers migrated into wound areas and achieved confluence within 24 hours post-scratch. There was a fast healing phase within 5 hours, followed by a slow-healing phase between 5 and 24 hours. Na<sup>+</sup> depletion reduced migration speed by at least 50%. Fewer cells at the migration front formed prominent lamellipodia. Some cells at the leading edge gradually detached from the monolayer. Reduction of Orai1 decreased wound closure speed by 25% within 6 hours. This Orai1-dependence was absent in Na<sup>+</sup>-depleted media and after 6 hours. In a non-scratch cell migration assay, the gap areas were partially sealed within 24 hours. Migration speed was reduced by 75% when extracellular Na<sup>+</sup> was replaced by choline. Orai1 did not contribute to non-scratch cell migration, but extracellular Na<sup>+</sup> did. Overall, extracellular Na<sup>+</sup> and Orai1 together acutely regulate endothelial wound healing. Extracellular Na<sup>+</sup> continuously contributes to wound healing between 6 and 24 hours. Extracellular Na<sup>+</sup> but not Orai1 contributes to cell migration in the absence of injury. Orai1 may function as an injury sensor to acutely stimulate fast wound healing.
DOI: 10.6084/m9.figshare.7713686.v1
title: Ptomacanthus 3D models

description: 3D models of <i>Ptomacanthus anglicus</i>, specimen P.24919a from the Natural History Museum, London, scanned at University of Bristol Life Sciences Department.<br>
DOI: 10.6084/m9.figshare.7713728.v1
title: Supplemental data from: Extracellular Na+ and Orai1 contribute to endothelial wound healing

description: Endothelial migration is necessary for wound healing and angiogenesis. Na<sup>+</sup> has been incriminated as an important cellular signal mediating migration, although the ion channels regulating Na<sup>+</sup> permeation that contribute to migration remain poorly understood. We have shown that Orai1 suppresses both constitutive Na<sup>+</sup> leak and Na<sup>+</sup> entry through store-operated calcium entry channels. Here, we examine the independent and combined contributions of extracellular Na<sup>+</sup> and Orai1 to pulmonary artery endothelial cell (PAEC) wound healing. We found that PAEC monolayers migrated into wound areas and achieved confluence within 24 hours post-scratch. There was a fast healing phase within 5 hours, followed by a slow-healing phase between 5 and 24 hours. Na<sup>+</sup> depletion reduced migration speed by at least 50%. Fewer cells at the migration front formed prominent lamellipodia. Some cells at the leading edge gradually detached from the monolayer. Reduction of Orai1 decreased wound closure speed by 25% within 6 hours. This Orai1-dependence was absent in Na<sup>+</sup>-depleted media and after 6 hours. In a non-scratch cell migration assay, the gap areas were partially sealed within 24 hours. Migration speed was reduced by 75% when extracellular Na<sup>+</sup> was replaced by choline. Orai1 did not contribute to non-scratch cell migration, but extracellular Na<sup>+</sup> did. Overall, extracellular Na<sup>+</sup> and Orai1 together acutely regulate endothelial wound healing. Extracellular Na<sup>+</sup> continuously contributes to wound healing between 6 and 24 hours. Extracellular Na<sup>+</sup> but not Orai1 contributes to cell migration in the absence of injury. Orai1 may function as an injury sensor to acutely stimulate fast wound healing.
DOI: 10.7284/103397
title: Multiplexed data collected during research cruise AT18-13 using a WHOI Calliope instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/108585
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AT18-13 using a Hawaii UHDAS instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7713500
title: ENCODE total RNAseq gene expression data

description: ENCODE total RNAseq gene expression data.
DOI: 10.7284/103401
title: Multibeam Echosounder data collected during research cruise AT18-13 using a Kongsberg EM122 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7713500.v1
title: ENCODE total RNAseq gene expression data

description: ENCODE total RNAseq gene expression data.
DOI: 10.6084/m9.figshare.7713491
title: ENCODE polyA RNAseq gene expression data

description: ENCODE polyA RNAseq gene expression data
DOI: 10.6084/m9.figshare.7713494
title: QC and additional meta-information

description: QC and additional meta-information
DOI: 10.6084/m9.figshare.7713497
title: TCGA gene expression data

description: TCGA gene expression data
DOI: 10.7284/103059
title: Multiplexed data collected during research cruise AT18-14 using a WHOI Calliope instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7713488
title: ANTE overview

description: ANTE overview
DOI: 10.6084/m9.figshare.7713488.v1
title: ANTE overview

description: ANTE overview
DOI: 10.6084/m9.figshare.7713491.v1
title: ENCODE polyA RNAseq gene expression data

description: ENCODE polyA RNAseq gene expression data
DOI: 10.6084/m9.figshare.7713497.v1
title: TCGA gene expression data

description: TCGA gene expression data
DOI: 10.6084/m9.figshare.7713494.v1
title: QC and additional meta-information

description: QC and additional meta-information
DOI: 10.7284/108588
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AT18-14 using a Hawaii UHDAS instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7713407
title: Table S10. Sedimentary geochemistry used to infer the provenance of Permian–Triassic marine sandstones related to the SE Gondwana active continental margin, South Island, New Zealand

description: Chemical analyses by XRF, including lithology and locations (GPS coordinates), of the Caples Terrane.
DOI: 10.7284/108586
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise AT18-14 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7713401
title: Table S5. Sedimentary geochemistry used to infer the provenance of Permian–Triassic marine sandstones related to the SE Gondwana active continental margin, South Island, New Zealand

description: Chemical analyses by XRF, including lithology and locations (GPS coordinates), of the Little Ben Fm.
DOI: 10.6084/m9.figshare.7713407.v1
title: Table S10. Sedimentary geochemistry used to infer the provenance of Permian–Triassic marine sandstones related to the SE Gondwana active continental margin, South Island, New Zealand

description: Chemical analyses by XRF, including lithology and locations (GPS coordinates), of the Caples Terrane.
DOI: 10.6084/m9.figshare.7713398
title: Table S18. Sedimentary geochemistry used to infer the provenance of Permian–Triassic marine sandstones related to the SE Gondwana active continental margin, South Island, New Zealand

description: Chemical analyses by ICP-MS, including lithology and locations (GPS coordinates), of the Waiua Fm.
DOI: 10.6084/m9.figshare.7713392
title: Table S3. Sedimentary geochemistry used to infer the provenance of Permian–Triassic marine sandstones related to the SE Gondwana active continental margin, South Island, New Zealand

description: Chemical analyses by XRF, including lithology and locations (GPS coordinates), of the Wooded Peak Fm.
DOI: 10.6084/m9.figshare.7713395
title: Table S6. Sedimentary geochemistry used to infer the provenance of Permian–Triassic marine sandstones related to the SE Gondwana active continental margin, South Island, New Zealand

description: Chemical analyses by XRF, including lithology and locations (GPS coordinates), of the Greville Fm.
DOI: 10.6084/m9.figshare.7713401.v1
title: Table S5. Sedimentary geochemistry used to infer the provenance of Permian–Triassic marine sandstones related to the SE Gondwana active continental margin, South Island, New Zealand

description: Chemical analyses by XRF, including lithology and locations (GPS coordinates), of the Little Ben Fm.
DOI: 10.7284/108587
title: Expendable Probe data collected during research cruise AT18-14 using a Sippican MK12 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7713389
title: Table S7. Sedimentary geochemistry used to infer the provenance of Permian–Triassic marine sandstones related to the SE Gondwana active continental margin, South Island, New Zealand

description: Chemical analyses by XRF, including lithology and locations (GPS coordinates), of the Waiua Fm.
DOI: 10.6084/m9.figshare.7713392.v1
title: Table S3. Sedimentary geochemistry used to infer the provenance of Permian–Triassic marine sandstones related to the SE Gondwana active continental margin, South Island, New Zealand

description: Chemical analyses by XRF, including lithology and locations (GPS coordinates), of the Wooded Peak Fm.
DOI: 10.6084/m9.figshare.7713386
title: Table S17. Sedimentary geochemistry used to infer the provenance of Permian–Triassic marine sandstones related to the SE Gondwana active continental margin, South Island, New Zealand

description: Chemical analyses by ICP-MS, including lithology and locations (GPS coordinates), of the Greville Fm.
DOI: 10.6084/m9.figshare.7713395.v1
title: Table S6. Sedimentary geochemistry used to infer the provenance of Permian–Triassic marine sandstones related to the SE Gondwana active continental margin, South Island, New Zealand

description: Chemical analyses by XRF, including lithology and locations (GPS coordinates), of the Greville Fm.
DOI: 10.6084/m9.figshare.7713398.v1
title: Table S18. Sedimentary geochemistry used to infer the provenance of Permian–Triassic marine sandstones related to the SE Gondwana active continental margin, South Island, New Zealand

description: Chemical analyses by ICP-MS, including lithology and locations (GPS coordinates), of the Waiua Fm.