cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1169526.10fu
title: SH1169526.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.fk38pg
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Physeterostemon R.Goldenb. & Amorim"
 ]
}

 The dataset includes 103 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026173-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111323962
title: Cuneiform Tablet

description: [Text Description:] Cuneiform Tablet, Administrative Tag, with Seal Impressions ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Clay tablet with cuneiform script, roughly triangular In shape.
DOI: 10.15468/dl.ubxawp
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Noccaea rosularis (Boiss. & Balansa) Al-Shehbaz"
 ]
}

 The dataset includes 15 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047535-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nj6tnk
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calligonum bakuense Litw."
 ]
}

 The dataset includes 12 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042203-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j9wq64
title: Occurrence Download

description: A dataset containing 540269 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fagus sylvatica L."
 ]
}

 The dataset includes 540269 records from 893 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049983-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111323852
title: Cuneiform Tablet

description: [Text Description:] Cuneiform Tablet, Administrative Tag, with Seal Impressions ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Clay tablet with cuneiform script, roughly triangular In shape.
DOI: 10.15468/dl.5uybs8
title: Occurrence Download

description: A dataset containing 849 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Specimen"
 ]
 },
 "Country is Mexico",
 "TaxonKey is Cyperus niger Ruiz & Pav."
 ]
}

 The dataset includes 849 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062877-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112025801
title: Cuneiform Tablet 1913.14.1507, Spurlock 1913.14.1507

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.1507; CDLI P421359 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/1.5) Moderate Yellowish Pink (5YR 7.5/4) Medium Gray (N 5.25/ 22.1% R) ❧ [Physical Object Note:] 10.5 x 7.4 x 2.6 cm (195g)
DOI: 10.15468/dl.k4eptz
title: Occurrence Download

description: A dataset containing 488681 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alnus glutinosa (L.) Gaertn."
 ]
}

 The dataset includes 488681 records from 956 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049977-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m7466k
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dendrolimus kikuchii Matsumura, 1927"
 ]
}

 The dataset includes 69 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045884-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14543446
title: pteropepon_parodii_spades_01.fasta.gz
DOI: 10.5281/zenodo.14543447
title: pteropepon_parodii_spades_01.fasta.gz
DOI: 10.15468/dl.2nvfwa
title: Occurrence Download

description: A dataset containing 175604 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cardamine flexuosa With."
 ]
}

 The dataset includes 175604 records from 1334 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045883-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/10269091
title: Global Genomic Neurofibromatosis Neoplasia
DOI: 10.34740/kaggle/dsv/10269101
title: UNET Lung Segmentation Weights for Chest X Rays
DOI: 10.5281/zenodo.14543456
title: rostraria_azorica_spades_01.fasta.gz
DOI: 10.5281/zenodo.14543457
title: rostraria_azorica_spades_01.fasta.gz
DOI: 10.15468/dl.cukej4
title: Occurrence Download

description: A dataset containing 702483 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Viet Nam",
 "OccurrenceStatus is Present",
 "Year 1999-2023"
 ]
}

 The dataset includes 702483 records from 802 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045881-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12633417
title: A near telomere-to-telomere phased reference assembly for the male mountain gorilla (Gorilla beringei beringei) -Oxford Nanopore reads

description: The critically endangered mountain gorilla Gorilla beringei beringei faces numerous threats to its survival, highlighting the urgent need for genomic resources to aid conservation efforts. Here, we present a near telomere-to-telomere, haplotype-phased reference genome assembly for a male mountain gorilla generated using Pacbio HiFi and Oxford Nanopore Ultralong data. The resulting assembly exhibits exceptional contiguity, with contig N50 of ~ 95 Mbps for the combined pseudohaplotype (3,540,458,497 bps, and 56.5 Mbps (3.1 Gbps) and 51.0 Mbps (3.2 Gbps) for the maternal and paternal haplotypes and an average QV of 65.15 (error rate = 3.1 x 10-7) and 0% switch errors detected. These represent substantial improvements over most other available primate genomes. This high-quality reference genome provides an invaluable resource for future studies on gorilla evolution, adaptation, and conservation, ultimately contributing to the long-term survival of this iconic species.

This repository hosts the Oxford Nanopore ultralong reads.

The preprint for this work is available at bioRXiv, doi: https://doi.org/10.1101/2024.10.28.620258.
DOI: 10.5281/zenodo.12633418
title: A near telomere-to-telomere phased reference assembly for the male mountain gorilla (Gorilla beringei beringei) -Oxford Nanopore reads

description: The critically endangered mountain gorilla Gorilla beringei beringei faces numerous threats to its survival, highlighting the urgent need for genomic resources to aid conservation efforts. Here, we present a near telomere-to-telomere, haplotype-phased reference genome assembly for a male mountain gorilla generated using Pacbio HiFi and Oxford Nanopore Ultralong data. The resulting assembly exhibits exceptional contiguity, with contig N50 of ~ 95 Mbps for the combined pseudohaplotype (3,540,458,497 bps, and 56.5 Mbps (3.1 Gbps) and 51.0 Mbps (3.2 Gbps) for the maternal and paternal haplotypes and an average QV of 65.15 (error rate = 3.1 x 10-7) and 0% switch errors detected. These represent substantial improvements over most other available primate genomes. This high-quality reference genome provides an invaluable resource for future studies on gorilla evolution, adaptation, and conservation, ultimately contributing to the long-term survival of this iconic species.

This repository hosts the Oxford Nanopore ultralong reads.
DOI: 10.5281/zenodo.14725280
title: A near telomere-to-telomere phased reference assembly for the male mountain gorilla (Gorilla beringei beringei) -Oxford Nanopore reads

description: The critically endangered mountain gorilla Gorilla beringei beringei faces numerous threats to its survival, highlighting the urgent need for genomic resources to aid conservation efforts. Here, we present a near telomere-to-telomere, haplotype-phased reference genome assembly for a male mountain gorilla generated using Pacbio HiFi and Oxford Nanopore Ultralong data. The resulting assembly exhibits exceptional contiguity, with contig N50 of ~ 95 Mbps for the combined pseudohaplotype (3,540,458,497 bps, and 56.5 Mbps (3.1 Gbps) and 51.0 Mbps (3.2 Gbps) for the maternal and paternal haplotypes and an average QV of 65.15 (error rate = 3.1 x 10-7) and 0% switch errors detected. These represent substantial improvements over most other available primate genomes. This high-quality reference genome provides an invaluable resource for future studies on gorilla evolution, adaptation, and conservation, ultimately contributing to the long-term survival of this iconic species.

This repository hosts the Oxford Nanopore ultralong reads.

The preprint for this work is available at bioRXiv, doi: https://doi.org/10.1101/2024.10.28.620258.
DOI: 10.15468/dl.ticxe0
title: Occurrence Download

description: A dataset containing 280 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anastrepha serpentina (Wiedemann, 1830)"
 ]
}

 The dataset includes 280 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036993-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.894dt3
title: Occurrence Download

description: A dataset containing 109 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Otus alius Rasmussen, 1998"
 ]
}

 The dataset includes 109 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059203-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4mv2qd
title: Occurrence Download

description: A dataset containing 792 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sphinx poecila Stephens, 1828"
 ]
}

 The dataset includes 792 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147315-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ijez2a
title: Occurrence Download

description: A dataset containing 223 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-68.18665 46.43646,-67.87903 46.43646,-67.87903 47.06818,-68.18665 47.06818,-68.18665 46.43646))",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 223 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036996-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wmkncd
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bogoria moorei (Rchb.f.) M.A.Clem. & D.L.Jones"
 ]
}

 The dataset includes 78 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062374-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.97vkjc
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Colombia",
 "StateProvince is Santander",
 "TaxonKey is Tremarctos ornatus (F.G.Cuvier, 1825)",
 "Year 2010-2021"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0198169-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cg7q4e
title: Occurrence Download

description: A dataset containing 645 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Psaltria exilis Temminck, 1836"
 ]
}

 The dataset includes 645 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003294-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lo2pz4
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Ceradenia L.E.Bishop",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036999-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w5yhhq
title: Occurrence Download

description: A dataset containing 776 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Valeriana pilosa Ruiz & Pav.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 776 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037004-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ray429
title: Occurrence Download

description: A dataset containing 9786 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dytiscus marginalis Linnaeus, 1758"
 ]
}

 The dataset includes 9786 records from 297 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0198168-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.svysx7
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bulbophyllum hamadryas Schltr."
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062378-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k7mxeq
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sinocorophium alienense (Chapman, 1988))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 68 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045480-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.strrgz
title: Occurrence Download

description: A dataset containing 40264 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chromolaena DC."
 ]
}

 The dataset includes 40264 records from 397 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037004-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tvr6ur
title: Occurrence Download

description: A dataset containing 2453 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera tigris (Linnaeus, 1758)"
 ]
}

 The dataset includes 2453 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0199654-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zt5ptn
title: Occurrence Download

description: A dataset containing 405 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bromus sclerophyllus Boiss."
 ]
}

 The dataset includes 405 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062391-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.urvhp3
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Tremarctos ornatus (F.G.Cuvier, 1825)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 123 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037005-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tdhnkw
title: Occurrence Download

description: A dataset containing 408607 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-101.94854 21.7928,-101.95772 20.39066,-99.12492 20.37475,-99.14297 21.80107,-101.94854 21.7928))"
 ]
}

 The dataset includes 408607 records from 532 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0199656-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zsz6u2
title: Occurrence Download

description: A dataset containing 424 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Podarcis lilfordi (Günther, 1874)"
 ]
}

 The dataset includes 424 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063109-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cr7zrb
title: Occurrence Download

description: A dataset containing 7300 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Rynchops flavirostris Vieillot, 1816"
 ]
}

 The dataset includes 7300 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059220-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r3q4oq
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bactrocera albistrigata (Meijere, 1911)"
 ]
}

 The dataset includes 42 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037005-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d87d54
title: Occurrence Download

description: A dataset containing 1732 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alexandrium tamarense (Lebour) Balech"
 ]
}

 The dataset includes 1732 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200743-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sjrc32
title: Occurrence Download

description: A dataset containing 514081 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psocodea"
 ]
}

 The dataset includes 514081 records from 627 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005800-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive145924.20241212.9.2
title: Rahnella aquatilis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.