cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25838/d5p-77
title: Chaperone/ETR1 Structural Models for: Molecular Mechanism and Structural Models of Protein-Mediated Copper Transfer to the Arabidopsis thaliana Ethylene Receptor ETR1 at the ER Membrane

description: In plants, the gaseous plant hormone ethylene regulates a wide range of developmental processes and stress responses. The small unsaturated hydrocarbon is detected by a family of receptors (ETRs) located in the membrane of the endoplasmic reticulum, which rely on a monovalent copper cofactor to detect this hydrocarbon. The copper-transporting P-type ATPase RAN1 (HMA7), located in the same membrane, is known to be essential for the biogenesis of ETRs. Still, the precise molecular mechanism by which the receptors acquire their copper cofactor remains unclear. A recent study by our laboratory demonstrated a direct interaction between RAN1 and soluble copper chaperones of the ATX1 family with the model ethylene receptor ETR1, providing initial insights into the mechanism by which copper is transferred from the cytosol to the membrane-bound receptors. In this study, we further investigated these interactions with respect to the function of individual domains in complex formation. To this end, we combined biochemical experiments and computational predictions and unraveled the processes and mechanisms by which copper is transferred to ETR1 at the molecular level.
DOI: 10.26093/cds/vizier.36720165
title: Meandering-period Miras

description: VizieR online Data Catalogue associated with article published in journal Astronomy and Astrophysics with title ' Meandering periods and asymmetries in light curves of Miras: Observational evidence for low mass-loss rates.' (bibcode: 2023A&A...672A.165M)
DOI: 10.6084/m9.figshare.28746221
title: Phylogenetic tree of the sdiA gene

description: <i>The phylogenetic tree of Salmonella sdiA gene sequences demonstrate notable genetic diversity across various serovars</i>. <i>A major cluster includes numerous S. </i>Enteritidis<i> strains, such as "Slowbro," "Swellow," "Wailord," and others, which group closely together yet display clear internal branching—suggesting intra-serovar variation within S. </i>Enteritidis<i>. Additional S. </i>Enteritidis<i> strains like "Charizard," "Marill," and "Glaceon" form a distinct subcluster, reinforcing the notion of genetic divergence within the same serovar. Other serovars, including S. </i>Typhimurium<i> (strains 14028 and S34), S. </i>Typhi <i>(Salty24446 1972 and 2017), and S. </i>Dublin<i> (SAL-19-0015), form separate, well-supported clades, indicating serovar-specific evolutionary divergence.</i>
DOI: 10.15472/cft3cu
title: Aves del Bosque Urbano Ciudad Montes

description: La metodología de esta investigación se enmarca en un proceso de Ciencia Participativa (CP) y se basa en los principios de la Investigación Acción Participativa (IAP), como lo proponen Sirvent y Pigal (2012).
description: La metodología adoptada busca involucrar activamente a la comunidad en todas las fases del estudio, desde la formación académica hasta la recolección de datos en campo. Este proceso incluyó actividades de capacitación virtual y presencial, adaptadas a la disponibilidad de los participantes, que abarcaban el manejo y uso de herramientas para la determinación, recolección, sistematización y análisis de datos.
description: Se llevaron a cabo talleres prácticos sobre diversos grupos taxonómicos como aves y plantas, con un enfoque especial en sus interacciones dentro de un ecosistema urbano.
description: Dentro de las actividades de recolección de datos, se implementaron jornadas de observación que fueron fundamentales para la descripción de la dieta de las aves en áreas urbanas.
description: En primer lugar, como parte del proceso de Ciencia Participativa, se realizaron tres sesiones de observación de eventos de alimentación en un bosque urbano, donde los participantes identificaron las dietas de las aves, tales como insectivoría, frugivoría y omnivoría.
description: En segundo lugar, se establecieron seis puntos de conteo en los cuales, una vez al mes, se registraron las especies de aves observadas, así como el número de individuos presentes, en un radio de 25 metros, con distancias de entre 115 y 150 metros entre puntos.
description: Esta metodología integral permitió no solo el enriquecimiento de la Plataforma de la Red de Interacciones Bióticas del JBB, sino también la mejora de la comprensión de las interacciones bióticas en un contexto urbano.
description: Este recurso de datos consta de 93 registros biológicos de 427 individuos de aves tomados en el Bosque Urbano Ciudad Montes, Bogotá durante el segundo semestre del 2024.
DOI: 10.6084/m9.figshare.28746233
title: Cyclic Voltammetry of S1 and S4

description: Cyclic Voltammetry (CV) experiment of S1 and S4 was carried out with three electrode cells in acetonitrile medium. Tetrabutylammonium perchlorate (TBAP) was employed as the supporting electrolyte.
DOI: 10.5281/zenodo.15170473
title: Table 1 in Species of Peckia Robineau-Desvoidy, 1830 (Diptera: Sarcophagidae) occurring in an Atlantic Rainforest fragment, Bahia, Brazil: new records reported

description: Table 1. Species of Peckia collected in two periods (dry and rainy) during the decomposition process of pig carcasses exposed in a fragment of Atlantic forest in the city of Salvador, Bahia, Brazil. (F) Fresh Phase; (G) Gas Phase; (ID) Initial Decomposition; (AD) Advanced Decomposition; (F) Final Phase (FA) Frequencia absoluta e (FR)Frequncia relativa. / Tabla 1. Especies de Peckia recolectadas en dos períodos (seco y lluvioso) durante el proceso de descomposición de cadáveres de cerdos expuestos en un fragmento de Mata Atlántica en la ciudad de Salvador, Bahia, Brasil. (F) Fase fresca; (G) Fase gaseosa; (ID) Descomposición inicial; (AD) Descomposición avanzada; (F) Fase final (FA) Frecuencia absoluta y (FR) Frecuencia relativa.
SpeciesRainy PeriodDry PeriodFGIDADFTotalFGIDADFTotalFAFR (%)Peckia (Euboettcheria) anguilla (Curran & Walley, 1934)00010100200232.3Peckia (Euboettcheria) collusor (Curran & Walley, 1934)0001572204900133527.3Peckia (Pattonella) intermutans (Walker, 1861)00000000202443.1Peckia (Peckia) chrysostoma (Wiedemann, 1830)000171330061303225240.6Peckia (Peckia) pexata (Wulp, 1895)00000002100332.3Peckia (Sarcodexia) lambens (Wiedemann, 1830)100203017290283124.2Peckia (Euboettcheria) tridentata (Hall, 1937)00000001000110.8Total100352056029299572128100.0
description: Published as part of Pamponet, Fernanda Maria, Santos Lopes, Daniele, Freitas de Oliveira, Favizia, Souza Thé, Torriceli & Antunes de Mello-Patiu, Catia, 2024, Species of Peckia Robineau-Desvoidy, 1830 (Diptera: Sarcophagidae) occurring in an Atlantic Rainforest fragment, Bahia, Brazil: new records reported, pp. 476 in Revista Chilena de Entomología (Rev. Chil. Entomol.) 50 (3) on page 476, DOI: 10.35249/rche.50.3.24.07, http://zenodo.org/record/14664416
DOI: 10.21227/sjny-xp41
title: Microgrid data

description: This dataset contains high-resolution, 10-minute time interval data on power generation and consumption in a remote Arctic microgrid. The microgrid integrates diesel generators, solar photovoltaic (PV) systems, and battery storage to meet community energy demands in extreme environmental conditions. The dataset captures the dynamic operation of distributed energy resources, including load variability, renewable generation intermittency, and battery cycling behavior. It supports research on microgrid optimization, renewable integration, and energy resilience in remote cold-climate communities. The detailed temporal resolution enables performance evaluation of hybrid energy systems and development of control strategies to enhance reliability and reduce diesel dependency in isolated grids.
DOI: 10.3886/icpsr06399.v5
title: Homicides in Chicago, 1965-1995
title: Version 5

description: These datasets contain information on every homicide in the
 murder analysis files of the Chicago Police Department for the years
 1965-1995. For the victim-level file, Part 1, data are provided on the
 relationship of victim to offender, whether the victim or offender had
 previously committed a violent or nonviolent offense, time of
 occurrence and place of homicide, type of weapon used, cause and
 motivation for the incident, whether the incident involved drugs,
 alcohol, gangs, child abuse, or a domestic relationship, if or how the
 offender was identified, and information on the death of the
 offender(s). Demographic variables such as the age, sex, and race of
 each victim and offender are also provided. The victim-level file
 contains one record for each victim. Information for up to five
 offenders is included on each victim record. The same offender
 information is duplicated depending on the number of victims. For
 example, if a sole offender is responsible for five victims, the file
 contains five victim records with the offender's information repeated
 on each record. Part 2, Offender-Level Data, is provided to allow the
 creation of offender rates and risk analysis that could not be
 accurately prepared using the victim-level file due to the repeating
 of the offender information on each victim record. Offender variables
 were reorganized during the creation of the offender file so that each
 known offender is associated with a single record. A majority of the
 variables in the offender-level file are replicas of variables in the
 victim-level file. The offender records contain demographic
 information about the offender, demographic and relationship
 information about the offender's first victim (or sole victim if there
 was only one), and information about the homicide incident.
 Information pertaining to the homicide incident such as location,
 weapon, or drug use are the same as in the victim-level file. In cases
 where the offender data were completely missing in the victim-level
 data, no offender records were generated in the offender-level
 file. The offender-level data do not contain information about the
 victims in these cases. Geographic variables in both files include the
census tract, community area, police district, and police area.
description: Datasets: 
DS0: Study-Level Files
DS1: Victim-Level Data
DS2: Offender-Level Data
description: All homicides in the murder analysis files of the Chicago
Police Department from 1965 through 1995. Smallest Geographic Unit: [city, census tract, police beat, police district, community area]
description: HOMICIDES IN CHICAGO, 1965-1981 (ICPSR 8941) is no
 longer available. Users interested in the data from ICPSR 8941 should
obtain ICPSR 6399 instead.
DOI: 10.6084/m9.figshare.28736918
title: Data for "Resilient Livelihoods: The Vulnerability of Commutes to Street Network Disruption"

description: The node attributes and the origin-destination result comprises the trip-level simulation outcomes of the study.
DOI: 10.6084/m9.figshare.28736918.v2
title: Origin-destination Result Data for "Resilient Livelihoods: The Vulnerability of Commutes to Street Network Disruption"

description: The origin-destination result comprises the trip-level simulation outcomes of the study.
DOI: 10.25345/c5z31p17q
title: MassIVE MSV000097561 - A microbiota-derived bile acid modulates biofilm formation by the probiotic strain Escherichia coli Nissle 1917
title: This project aims to understand the mechanism of biofilm formation in E. coli Nissle using various techniques, including proteomics.
DOI: 10.34740/kaggle/dsv/11315703
title: Daftar Pengadilan Indonesia
DOI: 10.3886/icpsr03306.v2
title: Multiple Cause of Death, 1998
title: Version 2

description: This data collection includes information about the cause
 of all recorded deaths occurring in the United States, Puerto Rico,
 the Virgin Islands, Guam, American Samoa, and the Commonwealth of the
 Northern Marianas during 1998. Data are provided concerning underlying
 causes of death, multiple conditions that caused the death, place of
 death, residence of the deceased (e.g., region, division, state,
 county), whether an autopsy was performed, and the month and day of
 the week of the death. In addition, data are supplied on the sex,
 race, age, marital status, education, usual occupation, and origin or
 descent of the deceased. In addition to the combined Territory
 Public-Use file (Part 2), a subset based on state of occurrence has
 been created for Puerto Rico, Virgin Islands, American Samoa, Guam,
 and Northern Marianas. Mortality detail data for 1998 also can be
 extracted from this file. The mortality detail records are contained
 in the first 159 positions of these multiple cause records. The
 multiple cause of death fields were coded from the MANUAL OF THE
 INTERNATIONAL STATISTICAL CLASSIFICATION OF DISEASES, INJURIES, AND
CAUSE-OF-DEATH, NINTH REVISION (ICD-9), VOLUMES 1 AND 2.
description: Datasets: 
DS0: Study-Level Files
DS1: United States, 1998
DS2: Combined Territories, 1998
DS3: Puerto Rico, 1998
DS4: Virgin Islands, 1998
DS5: Guam, 1998
DS6: American Samoa, 1998
DS7: Northern Marianas, 1998
description: All recorded deaths occurring in the United States, Puerto
 Rico, the Virgin Islands, Guam, American Samoa, and the Commonwealth
of the Northern Marianas during 1998.
description: (1) Effective with the 1998 data, the Commonwealth of
 the Northern Mariana's records are included in the Territories'
 Public-Use File (Part 2). (2) The data year is no longer located in
 positions 1-2 of the record. A four-digit data year is now located in
 positions 115-118. (3) The geographic codes were changed effective
 with the 1996 data to reflect the results of the 1990 Census. (4) Per
 agreement with NCHS, ICPSR distributes the data files and text of the
 technical documentation for this collection as prepared by NCHS. (5)
 The codebook, frequencies, record layout, appendices, and geographical
 code outlines are provided by ICPSR as Portable Document Format (PDF)
files.
DOI: 10.6084/m9.figshare.25309219
title: Behavioral and neural correlates of social hierarchy formation in a sex-changing fish

description: Social hierarchies in sex-changing fish determine which fish will change sex, yet the complexities of hierarchy formation at the neurobehavioral level are still being unraveled. Here, we investigate the formation of social hierarchies within groups of New Zealand spotty wrasse, integrating behavioral observations with neural activation patterns upon social disruption. We find that dominance hierarchies form linearly based on size, with larger fish displaying more dominant behaviors and smaller fish displaying more submissive behaviors. Disruption of the social hierarchy induced rapid behavioral changes, particularly in second-ranked fish, highlighting that second-ranked fish will opportunistically adopt a dominant position. Analysis of neural activation patterns reveals that the social decision-making network is deeply involved in the establishment of dominance, with the fish attaining dominance showing significant differences to all other ranked fish. Overall, this study underscores the complexity of social relationships and their neural underpinnings in the spotty wrasse, providing a foundation for further research into the cellular and molecular mechanisms of socially-controlled sex change, and demonstrates that disruption of the social hierarchy triggers rapid changes in both behavior and the social decision-making regions of the brain.
DOI: 10.5281/zenodo.10903800
title: The data for "The ZTF Source Classification Project: III. A Catalog of Variable Sources"

description: The classification of variable objects provides insight into a wide variety of astrophysics ranging from stellar interiors to galactic nuclei. The Zwicky Transient Facility (ZTF) provides time series observations that record the variability of more than a billion sources. The scale of these data necessitates automated approaches to make a thorough analysis. Building on previous work, this paper reports the results of the ZTF Source Classification Project (SCoPe), which trains neural network and XGBoost machine learning (ML) algorithms to perform dichotomous classification of variable ZTF sources using a manually constructed training set containing 170,632 light curves. We find that several classifiers achieve high precision and recall scores, suggesting the reliability of their predictions for 198,649,269 light curves across 70 ZTF fields. We also identify the most important features for XGB classification and compare the performance of the two ML algorithms, finding a pattern of higher precision among XGB classifiers. The resulting classification catalog is available to the public, and the software developed for SCoPe is open-source and adaptable to future time-domain surveys.
description: 1. From Version 0.0.1 to 0.0.2, classification predictions have been updated by the inclusion of the Gaia parallax error in the set of ontological features. Any fields downloaded from Version 0.0.1 should thus be replaced by those from Version 0.0.2.

2. The structure of the catalog has been updated - all fields are now contained (in CSV format) within a single predictions_dnn_xgb_70_fields.zip file.

3. A demo file containing 100 rows of predictions along with a Jupyter notebook to explain the columns are included in this release. See the scope-ml repository for details on setting up the environment needed to run this notebook.

4. The new fields.json file contains a list of all fields having classification predictions.
DOI: 10.5281/zenodo.10950514
title: The data for "The ZTF Source Classification Project: III. A Catalog of Variable Sources"

description: The classification of variable objects provides insight into a wide variety of astrophysics ranging from stellar interiors to galactic nuclei. The Zwicky Transient Facility (ZTF) provides time series observations that record the variability of more than a billion sources. The scale of these data necessitates automated approaches to make a thorough analysis. Building on previous work, this paper reports the results of the ZTF Source Classification Project (SCoPe), which trains neural network and XGBoost machine learning (ML) algorithms to perform dichotomous classification of variable ZTF sources using a manually constructed training set containing 170,632 light curves. We find that several classifiers achieve high precision and recall scores, suggesting the reliability of their predictions for 209,991,147 light curves across 77 ZTF fields. We also identify the most important features for XGB classification and compare the performance of the two ML algorithms, finding a pattern of higher precision among XGB classifiers. The resulting classification catalog is available to the public, and the software developed for SCoPe is open-source and adaptable to future time-domain surveys.
description: Notes for 0.0.3

1. All fields are now contained (in CSV format) within a single predictions_dnn_xgb_77_fields.zip file.

 

------------------------------------------------------------------------------------

Notes for 0.0.2

1. From Version 0.0.1 to 0.0.2, classification predictions have been updated by the inclusion of the Gaia parallax error in the set of ontological features. Any fields downloaded from Version 0.0.1 should thus be replaced by those from Version 0.0.2.

2. The structure of the catalog has been updated - all fields are now contained (in CSV format) within a single predictions_dnn_xgb_70_fields.zip file.

3. A demo file containing 100 rows of predictions along with a Jupyter notebook to explain the columns are included in this release. See the scope-ml repository for details on setting up the environment needed to run this notebook.

4. The new fields.json file contains a list of all fields having classification predictions.
DOI: 10.5281/zenodo.11068680
title: The data for "The ZTF Source Classification Project: III. A Catalog of Variable Sources"

description: The classification of variable objects provides insight into a wide variety of astrophysics ranging from stellar interiors to galactic nuclei. The Zwicky Transient Facility (ZTF) provides time series observations that record the variability of more than a billion sources. The scale of these data necessitates automated approaches to make a thorough analysis. Building on previous work, this paper reports the results of the ZTF Source Classification Project (SCoPe), which trains neural network and XGBoost machine learning (ML) algorithms to perform dichotomous classification of variable ZTF sources using a manually constructed training set containing 170,632 light curves. We find that several classifiers achieve high precision and recall scores, suggesting the reliability of their predictions for 236,607,991 light curves across 92 ZTF fields. We also identify the most important features for XGB classification and compare the performance of the two ML algorithms, finding a pattern of higher precision among XGB classifiers. The resulting classification catalog is available to the public, and the software developed for SCoPe is open-source and adaptable to future time-domain surveys.
description: Notes for 0.0.4

1. All fields are now contained (in CSV format) within a single predictions_dnn_xgb_92_fields.zip file.

 

------------------------------------------------------------------------------------

Notes for 0.0.3

1. All fields are now contained (in CSV format) within a single predictions_dnn_xgb_77_fields.zip file.

 

------------------------------------------------------------------------------------

Notes for 0.0.2

1. From Version 0.0.1 to 0.0.2, classification predictions have been updated by the inclusion of the Gaia parallax error in the set of ontological features. Any fields downloaded from Version 0.0.1 should thus be replaced by those from Version 0.0.2.

2. The structure of the catalog has been updated - all fields are now contained (in CSV format) within a single predictions_dnn_xgb_70_fields.zip file.

3. A demo file containing 100 rows of predictions along with a Jupyter notebook to explain the columns are included in this release. See the scope-ml repository for details on setting up the environment needed to run this notebook.

4. The new fields.json file contains a list of all fields having classification predictions.