cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/b6k77-r2r58
title: Pseudomonas aeruginosa_hypo/-N

description: Pseudomonas aeruginosa, N2 and osmotic shock (hypo)
description: <strong>Tilt Series Date:</strong> 2017-06-19</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lisa Racki made samples</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were concentrated to OD~3 and mixed with 4 nm gold</p>
<strong>Sample Preparation:</strong> Vitrobot: 100% humidity, blot time 4S, drain time 1 sec, Wait time 0, blot force 6</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-06-19-26/3dimage_85290/</p>Pa_20170619_hypod10003_part81_8.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-06-19-26/3dimage_85290/Pa_20170619_hypod10003_part81_8.rec"
        > <i class="download icon"></i> Download </a></p>

        Pa_20170619_hypod10003.mrc,  Tilt Series (Pixel Size 0.39 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-06-19-26/rawdata/Pa_20170619_hypod10003.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.4s9zzw
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Callistephus chinensis",
 "Country is Slovakia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047976-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/63tgz-kyn79
title: Xac WT pBRaφ pBRR MCS5 GFP

description: Xanthomonas citri   pv citri 306
description: <strong>Tilt Series Date:</strong> 2017-12-15</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -7.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Chuck Farah lab made the strain, data collected by Debnath Ghosal.</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 6 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-12-15-49/rawdata/</p>XanGFP15122017a0045.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-12-15-49/rawdata/XanGFP15122017a0045.mrc"
        > <i class="download icon"></i> Download </a></p>

        XanGFP15122017a0045_part61_14.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2017-12-15-49/3dimage_91376/XanGFP15122017a0045_part61_14.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.5grhhv
title: Occurrence Download

description: A dataset containing 55549 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Parthenocissus inserta"
 ]
}

 The dataset includes 55549 records from 953 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047895-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc110822123
title: Persepolis Fortification Elamite Tablet 2277.101, Fort 2277.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2277.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge, left edge broken.
DOI: 10.5517/ccdc.csd.cc2pznkx
title: CCDC 2502120: Experimental Crystal Structure Determination

description: Related Article: Yuan  Yue|2025|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2n3vg3
title: CSD 2446565: Experimental Crystal Structure Determination

description: Related Article: YiXu Wang, Ian Campbell, Zachary P. Tener, Judith K. Clark, Jacnel Graterol, Andrei Rogalev, Fabrice Wilhelm, Hu Zhang, Yi Long, Richard Dronskowski, Xiaoping Wang, Michael Shatruk|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c12764
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3886/e239565v1
title: Reference Data for "Farmers More Likely to Adopt Rice Varieties with Higher Density of Quantitative Trait Loci (QTL) in Viet Nam"

description: This paper presents the first nationwide analysis of the
rice varieties that Vietnamese farmers grow integrating DNA-based varietal
identification, quantitative trait loci (QTLs) data, and household survey
information. Using nationally representative data from 2022, we find that 51%
of rice farmers grew improved varieties. These varieties contained
significantly more beneficial QTLs associated with yield, grain quality, and
resistance to biotic and abiotic stresses than genetically unidentified
varieties. On average, the improved varieties cultivated had been released 14
years prior to 2022. Farmer’s socioeconomic
characteristics correlated with adoption patterns: belonging to an
ethnic minority or residing in a government-classified poor commune significantly
reduced the likelihood of growing an improved variety. Among adopters, varietal
traits further shaped adoption choices. Each additional trait-related QTL was
associated with a 0.9 percentage point increase in a province’s adoption rate. Traits
conferring tolerance to abiotic stress were positively associated with
adoption, reflecting farmers’ preference for varieties that enhance resilience
to environmental stressors, even as they continue to rely on pesticides for
managing biotic stress.
DOI: 10.25505/fiz.icsd.cc2n3vh4
title: CSD 2446566: Experimental Crystal Structure Determination

description: Related Article: YiXu Wang, Ian Campbell, Zachary P. Tener, Judith K. Clark, Jacnel Graterol, Andrei Rogalev, Fabrice Wilhelm, Hu Zhang, Yi Long, Richard Dronskowski, Xiaoping Wang, Michael Shatruk|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c12764
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2n3vj5
title: CSD 2446567: Experimental Crystal Structure Determination

description: Related Article: YiXu Wang, Ian Campbell, Zachary P. Tener, Judith K. Clark, Jacnel Graterol, Andrei Rogalev, Fabrice Wilhelm, Hu Zhang, Yi Long, Richard Dronskowski, Xiaoping Wang, Michael Shatruk|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c12764
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25549/inscriptifact-ouc110822129
title: Persepolis Fortification Elamite Tablet 2277.101, Fort 2277.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2277.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge, left edge broken.
DOI: 10.25549/inscriptifact-ouc110822111
title: Persepolis Fortification Elamite Tablet 2277.101, Fort 2277.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2277.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge, left edge broken.
DOI: 10.25549/inscriptifact-ouc110822119
title: Persepolis Fortification Elamite Tablet 2277.101, Fort 2277.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2277.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge, left edge broken.
DOI: 10.25549/inscriptifact-ouc110821399
title: Persepolis Fortification Elamite Tablet 2273.103, Fort 2273.103

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2273.103 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] All edges broken, except for small part of bottom edge.
DOI: 10.25549/inscriptifact-ouc110822044
title: Persepolis Fortification Elamite Tablet 2277.101, Fort 2277.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2277.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge, left edge broken.
DOI: 10.3886/e229761
title: USDA Confirmations of HPAI in Commercial and Backyard Flocks

description: APHIS confirmed highly pathogenic avian influenza (HPAI) in a commercial flock in the United States on February 8, 2022. Since then, they have worked swiftly to identify and respond to detections and mitigate the virus’ impact on U.S. poultry production and trade. This dataset includes detections of HPAI in Commercial and Backyard Flocks in the United States from February 2022 to May 2025.<br>
DOI: 10.3886/e229761v2
title: USDA Confirmations of HPAI in Commercial and Backyard Flocks

description: APHIS confirmed highly pathogenic avian influenza (HPAI) in a commercial flock in the United States on February 8, 2022. Since then, they have worked swiftly to identify and respond to detections and mitigate the virus’ impact on U.S. poultry production and trade. This dataset includes detections of HPAI in Commercial and Backyard Flocks in the United States from February 2022 to May 2025.<br>
DOI: 10.25549/inscriptifact-ouc110822038
title: Persepolis Fortification Elamite Tablet 2277.101, Fort 2277.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2277.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge, left edge broken.
DOI: 10.25549/inscriptifact-ouc110821194
title: Persepolis Fortification Elamite Tablet 2272.102, Fort 2272.102

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2272.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Borken right edge, upper edge, most of left edge.
DOI: 10.6084/m9.figshare.29178586
title: Drucker_etal_2025_ColombiaRadars_code_ESM.zip from Stable atmospheric conditions underlie a steady pace of nocturnal bird migration in the tropics

description: Supplementary code and data
DOI: 10.6084/m9.figshare.29178586.v1
title: Drucker_etal_2025_ColombiaRadars_code_ESM.zip from Stable atmospheric conditions underlie a steady pace of nocturnal bird migration in the tropics

description: Supplementary code and data
DOI: 10.22033/esgf/cmip6.435
title: MOHC HadGEM3-GC31-LL model output prepared for CMIP6 CFMIP

description: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets: These data include all datasets published for 'CMIP6.CFMIP.MOHC.HadGEM3-GC31-LL' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'.
 
 The HadGEM3-GC3.1-N96ORCA1 climate model, released in 2016, includes the following components:
 aerosol: UKCA-GLOMAP-mode, atmos: MetUM-HadGEM3-GA7.1 (N96; 192 x 144 longitude/latitude; 85 levels; top level 85 km), land: JULES-HadGEM3-GL7.1, ocean: NEMO-HadGEM3-GO6.0 (eORCA1 tripolar primarily 1 deg with meridional refinement down to 1/3 degree in the tropics; 360 x 330 longitude/latitude; 75 levels; top grid cell 0-1 m), seaIce: CICE-HadGEM3-GSI8 (eORCA1 tripolar primarily 1 deg; 360 x 330 longitude/latitude). 
The model was run by the Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK (MOHC) in native nominal resolutions: aerosol: 250 km, atmos: 250 km, land: 250 km, ocean: 100 km, seaIce: 100 km. 

Project: These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6).

CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ).

The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. - Project website: https://pcmdi.llnl.gov/CMIP6.
DOI: 10.22033/esgf/cmip6.5830
title: MOHC HadGEM3-GC31-LL model output prepared for CMIP6 CFMIP a4SST

description: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets: These data include all datasets published for 'CMIP6.CFMIP.MOHC.HadGEM3-GC31-LL.a4SST' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'.
 
 The HadGEM3-GC3.1-N96ORCA1 climate model, released in 2016, includes the following components:
 aerosol: UKCA-GLOMAP-mode, atmos: MetUM-HadGEM3-GA7.1 (N96; 192 x 144 longitude/latitude; 85 levels; top level 85 km), land: JULES-HadGEM3-GL7.1, ocean: NEMO-HadGEM3-GO6.0 (eORCA1 tripolar primarily 1 deg with meridional refinement down to 1/3 degree in the tropics; 360 x 330 longitude/latitude; 75 levels; top grid cell 0-1 m), seaIce: CICE-HadGEM3-GSI8 (eORCA1 tripolar primarily 1 deg; 360 x 330 longitude/latitude). 
The model was run by the Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK (MOHC) in native nominal resolutions: aerosol: 250 km, atmos: 250 km, land: 250 km, ocean: 100 km, seaIce: 100 km. 

Project: These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6).

CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ).

The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. - Project website: https://pcmdi.llnl.gov/CMIP6.
DOI: 10.22033/esgf/cmip6.5831
title: MOHC HadGEM3-GC31-LL model output prepared for CMIP6 CFMIP a4SSTice

description: Coupled Model Intercomparison Project Phase 6 (CMIP6) datasets: These data include all datasets published for 'CMIP6.CFMIP.MOHC.HadGEM3-GC31-LL.a4SSTice' with the full Data Reference Syntax following the template 'mip_era.activity_id.institution_id.source_id.experiment_id.member_id.table_id.variable_id.grid_label.version'.
 
 The HadGEM3-GC3.1-N96ORCA1 climate model, released in 2016, includes the following components:
 aerosol: UKCA-GLOMAP-mode, atmos: MetUM-HadGEM3-GA7.1 (N96; 192 x 144 longitude/latitude; 85 levels; top level 85 km), land: JULES-HadGEM3-GL7.1, ocean: NEMO-HadGEM3-GO6.0 (eORCA1 tripolar primarily 1 deg with meridional refinement down to 1/3 degree in the tropics; 360 x 330 longitude/latitude; 75 levels; top grid cell 0-1 m), seaIce: CICE-HadGEM3-GSI8 (eORCA1 tripolar primarily 1 deg; 360 x 330 longitude/latitude). 
The model was run by the Met Office Hadley Centre, Fitzroy Road, Exeter, Devon, EX1 3PB, UK (MOHC) in native nominal resolutions: aerosol: 250 km, atmos: 250 km, land: 250 km, ocean: 100 km, seaIce: 100 km. 

Project: These data have been generated as part of the internationally-coordinated Coupled Model Intercomparison Project Phase 6 (CMIP6; see also GMD Special Issue: http://www.geosci-model-dev.net/special_issue590.html). The simulation data provides a basis for climate research designed to answer fundamental science questions and serves as resource for authors of the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR6).

CMIP6 is a project coordinated by the Working Group on Coupled Modelling (WGCM) as part of the World Climate Research Programme (WCRP). Phase 6 builds on previous phases executed under the leadership of the Program for Climate Model Diagnosis and Intercomparison (PCMDI) and relies on the Earth System Grid Federation (ESGF) and the Centre for Environmental Data Analysis (CEDA) along with numerous related activities for implementation. The original data is hosted and partially replicated on a federated collection of data nodes, and most of the data relied on by the IPCC is being archived for long-term preservation at the IPCC Data Distribution Centre (IPCC DDC) hosted by the German Climate Computing Center (DKRZ).

The project includes simulations from about 120 global climate models and around 45 institutions and organizations worldwide. - Project website: https://pcmdi.llnl.gov/CMIP6.