cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4196336
title: input and TS ensemble for "Converging experimental and computational views of the knotting mechanism of the smallest knotted protein"

description: PLUMED input and TS ensemble for "Converging experimental and computational views of the knotting mechanism of the smallest knotted protein"
DOI: 10.5281/zenodo.4196335
title: input and TS ensemble for "Converging experimental and computational views of the knotting mechanism of the smallest knotted protein"

description: PLUMED input and TS ensemble for "Converging experimental and computational views of the knotting mechanism of the smallest knotted protein"
DOI: 10.5281/zenodo.4624429
title: NMR-Guided Rational Engineering of Endocellulase from Acidothermus Cellulolyticus for Reducing Product Inhibition

description: These are the plumed input files needed to reproduce the funnel metadynamics results for cellobiose binding to WT 1ECE, Y245G mutant, and W212A mutant.
DOI: 10.5281/zenodo.4562685
title: Digital representation of some of the clade definitions in Brochu 2003 in the Phyloreference Exchange (Phyx) format

description: This dataset includes digital representations of the clade definitions published in Brochu 2003 in the Phyloreference Exchange (Phyx) format, in JSON-LD and in N-Quads. It is intended as an exemplar of a phyloreference in Phyx. Brochu 2003: Christopher A. Brochu (2003) Phylogenetic Approaches Toward Crocodylian History. Annual Review of Earth and Planetary Sciences 2003 31:1, 357-397. https://doi.org/10.1146/annurev.earth.31.100901.141308
DOI: 10.5281/zenodo.4562684
title: Digital representation of some of the clade definitions in Brochu 2003 in the Phyloreference Exchange (Phyx) format

description: This dataset includes digital representations of the clade definitions published in Brochu 2003 in the Phyloreference Exchange (Phyx) format, in JSON-LD and in N-Quads. It is intended as an exemplar of a phyloreference in Phyx. Brochu 2003: Christopher A. Brochu (2003) Phylogenetic Approaches Toward Crocodylian History. Annual Review of Earth and Planetary Sciences 2003 31:1, 357-397. https://doi.org/10.1146/annurev.earth.31.100901.141308
DOI: 10.6073/pasta/c9f9eb9263548902f4e5f37d188d35e8
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Adams Stream at M1, McMurdo Dry Valleys, Antarctica (2018-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Adams Stream at the M1 streamgage, located in Miers Valley. Measurements commenced during the 2018-19 season. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6073/pasta/3ed29a54f51144af91c53f1b4c7858be
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Aiken Creek at F5, McMurdo Dry Valleys, Antarctica (1990-2019, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Aiken Stream at the F5 streamgage, located in the Fryxell Basin of Taylor Valley. Measurements commenced during the 1990-91 season. Anticipating lake level rise and the eventual submergence of the original control structure, an upstream control and streamgage was installed on 21 Dec 2011 and run simultaneously until the original control and streamgage was removed on 17 Jan 2013 at 12:52. During the period of overlap, data from the original streamgage was used for submitted data through 16 Jan 2013 12:00, afterward all data is from the upstream streamgage. This dataset extends through the 2018-19 field season.
DOI: 10.6073/pasta/7dd79fd8d81b421f8b64d446babbab65
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Andersen Creek at H1, McMurdo Dry Valleys, Antarctica (1993-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Andersen Creek at the H1 streamgage, located in the Hoare Basin of Taylor Valley. Measurements commenced during the 1993-94 season and are ongoing. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6073/pasta/b2524bcebda9c14d7478f91df888daa2
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Bohner Stream at B5, McMurdo Dry Valleys, Antarctica (2011-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the Bohner Stream at the B5 streamgage, located in the Bonney Basin of Taylor Valley. Measurements commenced during the 2011-12 season and are ongoing. Gage control was constructed on 27 Jan 2011 at -77.696302 62.558285. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6073/pasta/83822c76f89b02f8d5aa56814150a698
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Canada Stream at F1, McMurdo Dry Valleys, Antarctica (1990-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in this region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Canada Stream at the F1 streamgage, located in the Fryxell Basin of Taylor Valley. Measurements commenced during the 1990-91 season and are ongoing. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6073/pasta/f77f93be497f540ae7e262866e13970e
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Commonwealth Stream at C1, McMurdo Dry Valleys, Antarctica (1993-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Commonwealth Stream at the C1 streamgage, located in the Fryxell Basin of Taylor Valley. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6073/pasta/a518afcf92400a4a77729d9316b99a13
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Crescent Stream at F8, McMurdo Dry Valleys, Antarctica (1990-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Crescent Stream at the F8 streamgage, located in the Fryxell Basin of Taylor Valley. Measurements commenced during the 1990-91 season. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6073/pasta/5bdd3bc9f188471b16653ca39f18a048
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Delta Stream at F10, McMurdo Dry Valleys, Antarctica (1990-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Delta Stream at the F10 streamgage, located in the Fryxell Basin of Taylor Valley. Measurements commenced during the 1990-91 season and are ongoing. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6073/pasta/bfc57244c435c0827e58f52e170bed73
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Green Creek at F9, McMurdo Dry Valleys, Antarctica (1990-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Green Creek at the F9 streamgage, located in the Fryxell Basin of Taylor Valley. Measurements commenced during the 1990-91 season and are ongoing. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.5281/zenodo.4624459
title: CoVaxxy Tweet IDs data set

description: A collection of Tweet IDs related to Covid-19 Vaccines, gathered from Twitter since Jan 4, 2021. Please see https://arxiv.org/abs/2101.07694 for more information.
DOI: 10.6073/pasta/bd2cffa1969146bca72cb740f9566026
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Harnish Creek at F7, McMurdo Dry Valleys, Antarctica (2001-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Harnish Creek at the F7 streamgage, located in the Fryxell Basin of Taylor Valley. Measurements commenced during the 2001-02 season and are ongoing. The first several seasons had either no flow or such a low flow that could not be measured. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6073/pasta/0c13fd0c4679ba791e5622822053693f
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Harnish Creek Tributary (Relict Channel) at F11, McMurdo Dry Valleys, Antarctica (1996-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Harnish Creek Tributary (Relict Channel) at the F11 streamgage, located in the Fryxell Basin of Taylor Valley. Measurements commenced during the 1996-97 season and are ongoing. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6073/pasta/8ecfcceede066137abc4a01d09798d07
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Huey Creek at F2, McMurdo Dry Valleys, Antarctica (1990-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contain data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Huey Stream at the F2 streamgage, located in the Fryxell Basin of Taylor Valley. Measurements commenced during the 1990-91 season. The Huey at F2 control was buried by sediment and rock sometime before 29 Dec 2010 and the site was abandoned on 19 Jan 2011. An upstream location was established 28 Dec 2012. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6073/pasta/0987245799c74757ab0bc3fc137caecb
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Lawson Creek at B3, McMurdo Dry Valleys, Antarctica (1994-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contain data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Lawson Creek at the B3 streamgage, located in the Bonney Basin of Taylor Valley. Measurements commenced during the 1994-95 season. The data associated with this record can be used to extrapolate the discontinued hydrological data nearby at the Santa Fe Stream. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6073/pasta/3c3ae5bb8e081057dfcbdab82d1dc819
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Miers Stream at M2, McMurdo Dry Valleys, Antarctica (2014-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Miers Stream at the M2 streamgage, located in Miers Valley. Measurements commenced during the 2014-15 season. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6073/pasta/6144d0318df3e86205a911a9a0bf2b8d
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from the Onyx River at Lake Vanda, McMurdo Dry Valleys, Antarctica (1969-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Onyx River at the Lake Vanda streamgage, located in the Wright Valley. Measurements commenced in 1969 and are ongoing. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.5281/zenodo.4604929
title: Impacts of climate and land cover trends on the freshwater input to a fjord of northwestern Patagonia

description: This dataset contains: - Historical hydro-climatic observations for the Puelo River Basin (precipitation, air temperature, streamflow) - Bias corrected precipitation and temperature for 2000-2019 (hydrologic modeling period) - Land cover for 2001, 2016, 2030 (SC-1) - Reconstruction of burned areas for 1985-2019.
DOI: 10.5281/zenodo.4604928
title: Impacts of climate and land cover trends on the freshwater input to a fjord of northwestern Patagonia

description: This dataset contains: - Historical hydro-climatic observations for the Puelo River Basin (precipitation, air temperature, streamflow) - Bias corrected precipitation and temperature for 2000-2019 (hydrologic modeling period) - Land cover for 2001, 2016, 2030 (SC-1) - Reconstruction of burned areas for 1985-2019.
DOI: 10.6073/pasta/673b13c8bcf0ac0a4b7064f154ee0866
title: Seasonal high-frequency measurements of discharge, water temperature, and specific conductivity from Von Guerard Stream at F6, McMurdo Dry Valleys, Antarctica (1990-2020, ongoing)

description: As part of the Long Term Ecological Research (LTER) project in the McMurdo Dry Valleys of Antarctica, a systematic sampling program has been undertaken to monitor the glacial meltwater streams in that region. This package contains data pertaining to continuous monitored water quality and quantity parameters measured with automatic recording devices on streams in this region. Specifically, this metadata record describes the hydrology data set for the McMurdo Dry Valleys' Von Guerard Stream at the F6 streamgage, located in the Fryxell Basin of Taylor Valley. Measurements commenced during the 1990-91 season. The Von Guerard Stream gage (at -77.608269, 163.253853) was removed on 20 Dec 2012 due to lake level rise. A new gage upstream (at -77.609210, 163.254203) has been in use since the 2012-2013 season. This dataset extends through the first half of the 2019-20 field season.
DOI: 10.6084/m9.figshare.14251601
title: Ribosomal protein database of Shewanella baltica ATCC BAA-1091

description: This work presents the ribosomal protein database of <i>Shewanella baltica </i>ATCC BAA-1091. Original data for the work came from the annotated proteome data of the bacterium downloaded from UniProt. Using an in-house MATLAB ribosomal protein database analysis software, the original proteome data file was parsed to extract protein name and amino acid sequence of all ribosomal proteins in the species. The database also includes calculated variables such as number of residues, molecular weight, and nucleotide sequence. Overall, the presented database could serve as a ribosomal protein mass fingerprint for use in microbial identification, or it could be used in fundamental studies seeking to uncover new insights into ribosomal protein biology.
DOI: 10.6084/m9.figshare.14251601.v1
title: Ribosomal protein database of Shewanella baltica ATCC BAA-1091

description: This work presents the ribosomal protein database of <i>Shewanella baltica </i>ATCC BAA-1091. Original data for the work came from the annotated proteome data of the bacterium downloaded from UniProt. Using an in-house MATLAB ribosomal protein database analysis software, the original proteome data file was parsed to extract protein name and amino acid sequence of all ribosomal proteins in the species. The database also includes calculated variables such as number of residues, molecular weight, and nucleotide sequence. Overall, the presented database could serve as a ribosomal protein mass fingerprint for use in microbial identification, or it could be used in fundamental studies seeking to uncover new insights into ribosomal protein biology.
DOI: 10.5281/zenodo.4594207
title: Orca: Sequence-based modeling of genome 3D architecture from kilobase to chromosome-scale (Part1)

description: This dataset (Part 1) provide the core resource files required for using the code of Orca, including models and the hg38 reference genome (resources_core.tar.gz), and the micro-C mcool files required for extracting the experimental observations (resources_mcools.tar.gz). Orca is a sequence-based deep learning modeling framework for multiscale genome 3D architecture.
DOI: 10.7277/sm1f-dc11
title: Collapse Simulation of Multi-Story Buildings Through Hybrid Testing (NEES-2010-0912)

description: &lt;p&gt;&lt;strong&gt;Title:&lt;/strong&gt; Collapse Simulation of Multi-Story Buildings Through Hybrid Testing (NEES-2010-0912)&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Year Of Curation: &lt;/strong&gt;2015&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Description: &lt;/strong&gt;Uncertainties in ground motions and structural response to those ground motions along with economic constraints impose the acceptance of a small probability of collapse. Assessment of this small probability of collapse requires the ability to confidently predict the response of structures through collapse. Experimental tests at the structural level are needed to validate collapse predictions and evaluate phenomena that are not represented adequately in component tests, but these tests are very expensive and potentially dangerous. To solve this problem, this project uses hybrid testing for collapse simulation.&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Award: &lt;/strong&gt;http://www.nsf.gov/awardsearch/showAward?AWD_ID=0936633&lt;/p&gt; &lt;p&gt;&lt;strong&gt;PIs &amp; CoPIs: &lt;/strong&gt;Eduardo Miranda, Ricardo Medina, Gilberto Mosqueda&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Dates: &lt;/strong&gt;September 01, 2009 - September 16, 2013&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Organizations: &lt;/strong&gt;,California State University, Sacramento, CA, United States,    Stanford University, CA, United States,    State University of New York at Buffalo, NY, United States,    University of New Hampshire, NH, United States&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Facilities: &lt;/strong&gt;State University of New York at Buffalo, NY, United States,    University of California, Berkeley, CA, United States&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Sponsor: &lt;/strong&gt;NSF - 0936633 &lt;/p&gt; &lt;p&gt;&lt;strong&gt;Keywords: &lt;/strong&gt;Hybrid Simulation,Collapse&lt;/p&gt; &lt;p&gt;&lt;strong&gt;Publications:&lt;/strong&gt; -- &lt;/p&gt; &lt;nb:citations&gt;&lt;/nb:citations&gt;
DOI: 10.5517/ccdc.csd.cc22k1d3
title: CCDC 1923004: Experimental Crystal Structure Determination

description: Related Article: Debabrata Barman, Tanmoy Ghosh, Krishanu Show, Sudipto Debnath, Tapas Ghosh, Dilip K. Maiti|2021|Org.Lett.|23|2178|doi:10.1021/acs.orglett.1c00337
DOI: 10.5517/ccdc.csd.cc23jhtz
title: CCDC 1952281: Experimental Crystal Structure Determination

description: Related Article: Jiayong Zhang, Yuhe Qiu, Biao Zhang, Zhiqiang Huang, Zhengjie He|2021|Org.Lett.|23|1880|doi:10.1021/acs.orglett.1c00286
DOI: 10.5517/ccdc.csd.cc25gcyz
title: CCDC 2009821: Experimental Crystal Structure Determination

description: Related Article: Yuxin Ding, Renchao Ma, Xu-Qiong Xiao, Lei Wang, Zhiming Wang, Yongmin Ma|2021|J.Org.Chem.|86|3897|doi:10.1021/acs.joc.0c02764