cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24440692.v1
title: Supplementary Data for Zhang et al. "Public Discourses and Government Interventions behind China’s Ambitious Carbon Neutrality Goal"

description: Supplementary data for the article "Public Discourses and Government Interventions behind China’s Ambitious Carbon Neutrality Goal". This dataset contains the following six files:Overall Weibo Data: Source data for Figure 1, Figure 2, Supplementary Figure 1, Supplementary Figure 2.Influencer Weibo Data: Source data for Figure 3.Government Weibo Data: Source data for Figure 4.Policy Weibo Data: Source data for Figure5, Supplementary Figure 3, Supplementary Figure 4, Supplementary Figure 5.General User Demography Data, Influencer Demography Data: Source data for Supplementary Figure 6.
DOI: 10.17028/rd.lboro.6969851.v1
title: 500uL Mould FDM

description: Mould for the creation of tissue engineered skeletal muscle in 500uL construct volumes. To be 3D printed using fused deposition modelling (FDM).
DOI: 10.6084/m9.figshare.28884944.v1
title: Intrinsic Limits on Quantum Coherence: Characteristic Velocity, Frequency, and Geometric Thresholds.

description: Quantum coherence, the hallmark of quantum superposition and interference, is not only limited by environmental decoherence but also by intrinsic quantum properties and spacetime geometry. In this work, we rigorously derive characteristic velocity scales and critical frequencies that define the persistence of coherence, based on the Heisenberg Uncertainty Principle and wave packet dynamics. We further extend the framework to include potential influences of spacetime curvature, introducing a geometric length scale relevant to coherence persistence. This unified approach offers quantitative thresholds for coherence in ultracold atoms, neutron interferometry, nanomechanical resonators, and extreme astrophysical environments. Our results provide insights into the interplay between quantum mechanics, spatial confinement, and geometry, offering guidance for experimental design and quantum technology development.
DOI: 10.6084/m9.figshare.21548631.v1
title: Metabolomic analysis of colorectal cancer cells using mass spectrometry_HT29 COLO205

description: In the metastasis process of colorectal cancer (CRC), cancer cells exhibit altered dependency on specific metabolic pathways and some of the metabolites discovered might be useful as potential diagnostic biomarkers. To identify metabolic pathway dependencies in CRC metastasis, mass spectrometry-based untargeted metabolomic analysis was performed in two pairs of CRC cell lines with different metastatic abilities. Each pair of cell lines was comprised of primary and metastatic colorectal cancer cell lines (SW480 vs. SW620; HT-29 vs. COLO 205).
DOI: 10.6084/m9.figshare.25116548.v3
title: Gemome assembly and gene annotation files of <i>Lactuca sativa</i> var. <i>crispa</i> cv. Green Elegance

description: Gemome assembly and gene annotation files of <i>Lactuca sativa</i> var. <i>crispa</i> cv. Green Elegance.
DOI: 10.6084/m9.figshare.16922764.v2
title: Intra-genomic rRNA gene variability of Nassellaria and Spumellaria (Rhizaria, Radiolaria) assessed by Sanger, MinION and Illumina sequencing

description: Ribosomal DNA (rDNA) genes are known to be valuable markers for the barcoding of eukaryotic life and its phylogenetic classification at various taxonomic levels. The large scale exploration of environmental microbial diversity through metabarcoding approaches have been focused mainly on the hypervariable regions V4 and V9 of the 18S rDNA gene. Yet, the accurate interpretation of such environmental surveys is hampered by technical (e.g., PCR and sequencing errors) and biological biases (e.g., intra-genomic variability). Here we explored the intra-genomic diversity of Nassellaria and Spumellaria specimens (Radiolaria) by comparing Sanger sequencing with two different high-throughput sequencing platforms: Illumina and Oxford Nanopore Technologies (MinION). Our analysis determined that intra-genomic variability of Nassellaria and Spumellaria is generally low, yet in some Spumellaria specimens we found two different copies of the V4 with a similarity lower than 97%. From the different sequencing methods, Illumina showed the highest number of contaminations (i.e., environmental DNA, cross-contamination, tag-jumping), revealed by its high sequencing depth; and Minion showed the highest sequencing rate error (~14%). Yet the long reads produced by MinION (~2900 bp) allowed accurate phylogenetic reconstruction studies. These results, highlight the requirement for a careful interpretation of Illumina based metabarcoding studies, in particular regarding low abundant amplicons, and open future perspectives towards full environmental rDNA metabarcoding surveys.<br> <br> Here you can find 7 files gathering raw data obtained in this study and its associated metadata: <br> Data obtained by <strong>Sanger</strong> sequencing:<br> sanger_raw.fasta.gz: A fasta file containing the sequences with the following sequence names: "Cell-identifier_primer_barcode_well"; please note the underscore delimiting fields. <br> Data obtained by <strong>MinION (ONT)</strong> sequencing: minion_raw.fastq.gz: Fastq file. minion_raw.fast5.tar.gz: Fast5 native MinION raw data for future implementations or re-analysis. info_minion_demultiplex.txt: The information file for demultiplexing MinION data. <br> Data obtained by <strong>Illumina</strong> sequencing: R1.fastq.gz: R1 fastq file. R2.fastq.gz: R2 fastq file. info_illumina_tags_cutadapt.txt: The information file for demultiplexing Illumina data.<br> <br> For further details or if using these datasets, please see/cite the following study:<br> Sandin MM, Romac S, Not F (2022) <strong>Intra-genomic rRNA gene variability of Nassellaria and Spumellaria (Rhizaria, Radiolaria) assessed by Sanger, MinION and Illumina sequencing</strong>. <em>in press, Environmental Microbiology</em>; <strong>https://doi.org/10.1111/1462-2920.16081</strong><br>
DOI: 10.6084/m9.figshare.29109656.v1
title: Interview Ava.docx

description: In-depth interview transcription
DOI: 10.6084/m9.figshare.7773557.v1
title: Periodontal disease, peri-implant disease and levels of salivary biomarkers IL-1β, IL-10, RANK, OPG, MMP-2, TGF-β and TNF-α: follow-up over 5 years

description: Abstract Objective The aim of this study was to evaluate the levels of salivary biomarkers IL-1β, IL-10, RANK, OPG, MMP-2, TG-β and TNF-α in individuals with diagnosis of peri-implant mucositis in the absence or presence of periodontal and peri-implant maintenance therapy (TMPP) over 5 years. Material and Methods Eighty individuals diagnosed with peri-implant mucositis were divided into two groups: one group that underwent periodontal and peri-implant regularly maintenance therapy, called GTP (n=39), and a second group that received no regular maintenance GNTP (n=41). Each participant underwent a complete periodontal and peri-implant clinical examination. Collection of saliva samples and radiographic examination to evaluate peri-implant bone levels were conducted at two times: initial examination (T1) and after 5 years (T2). The salivary samples were evaluated through ELISA for the following markers: IL-1β, IL-10, RANK, OPG, MMP-2, TGF and TNF-α. Results A higher incidence of peri-implantitis was observed in the GNTP group (43.9%) than in the GTP group (18%) (p=0.000). All individuals (n=12) who presented peri-implant mucositis and had resolution at T2 were in the GTP group. After 5 years, there was an increase in the incidence of periodontitis in the GNTP group compared to the GTP group (p=0.001). The results of the study revealed an increase in the salivary concentration of TNF-α in the GNTP group compared to the GTP group. The other salivary biomarkers that were evaluated did not show statistically significant differences between the two groups. Conclusions The salivary concentration of TNF-α was increased in individuals with worse periodontal and peri-implant clinical condition and in those with a higher incidence of peri-implantitis, especially in the GNTP group. Longitudinal studies in larger populations are needed to confirm these findings and elucidate the role of this biomarker in peri-implant disease.
DOI: 10.17632/48dg9vhmyk
title: Images of American Sign Language (ASL) Alphabet Gestures

description: This dataset contains images of American Sign Language (ASL) gestures. It contains a total of 210,000 images of 28 classes representing various ASL signs (A-Z, Del, Space).
 
The images are captured from various angles against different backgrounds, which enhances the dataset's diversity and suitability for real-world applications. To ensure robustness and reduce bias in machine learning models, the dataset includes contributions from 3 individuals, capturing variations in hand shapes, sizes, and gestures.
DOI: 10.17632/x9xjhb6kgm
title: Cerium doped graphene-based materials towards oxygen reduction reaction catalysis

description: Dataset for Cerium doped graphene-based materials towards oxygen reduction reaction catalysis. Materials Today Communications, v. 38, p. 108461-108466, 2024
DOI: 10.6084/m9.figshare.6137315.v1
title: Full American Gut Project mapping file

description: The full American Gut Project mapping file, includes non-fecal samples.
DOI: 10.6084/m9.figshare.7609193.v4
title: CA_lidar_tree_mortality

description: Data for: Tree height explains mortality risk during an intense drought<br>https://rdcu.be/bU8go<br><b>Tree-level Information</b>Zone: tree ID number Zmax: tree height (m)Count: integer value (1) <b>Yearly Pixel-based Mortality Estimates</b>mort2009: % of “dead” pixels in 2009mort2010: as above for 2010mort2012: as above for 2012mort2014: as above for 2014mort2016: as above for 2016<br><b>Tree-level Mortality Estimates</b>x: x coordinate (UTM Zone 11N)y: y coordinate (UTM Zone 11N)dead: 0 = Live; 1 = Dead, based on 37.5% crown mortality thresholdmort_year: Estimated year of mortality <b>Environmental Variables</b>tmax: PRISM mean of maximum temperature (degrees C) over the study period.ppt: PRISM mean of maximum temperature (mm) over the study period.pptn: WorldClim annual precipitation normals (mm) from 1981-2010.tmaxn: WorldClim maximum temperature normals (degrees C) from 1981-2010.aws: SURGGO available soil water (mm) elevation: LiDAR 1 m elevation (m) slope: LiDAR slope 1 m (degrees)aspect: LiDAR 1 m aspect (degrees)cover: LiDAR 1 ha forest cover (%)vpdmax: PRISM mean VPDmax (hectopascals)<br><br>
DOI: 10.17632/xmrh5mmf94
title: Data for: Microporous Polysaccharide Hemosphere Efficacy and Safety in Primary Total Knee Arthroplasty

description: Raw Data
DOI: 10.6084/m9.figshare.19823302.v2
title: RNA-seq sequence of db/db mice

description: RNA-seq sequence information of db/db mice
DOI: 10.6084/m9.figshare.28344668.v1
title: Dataset for The Relationship Between TV Series Watching Motivations and Personality Traits A Study on Turkish Drama Series Viewers.xlsx

description: This dataset contains survey responses collected for the study titled 'The Relationship Between TV Series Watching Motivations and Personality Traits: A Study on Turkish Drama Series Viewers.' The data includes responses from [X] participants and covers demographic information, TV series watching motivations, and personality traits. The dataset is provided in Excel (.xlsx) format and was used to analyze the relationship between viewing motivations and personality characteristics in the context of Turkish drama series.
DOI: 10.17632/r7zm22h7x4
title: MarsWRF 3 Simulation Comparison

description: 3 simulations by the MarsWRF model are the basis of this research study. These include 2 simulations with a horizontal resolution of 2°×2°, which have "interactive" and "prescribed" dust parametrization, respectively. Moreover, there is 1 simulation at the extremely high horizontal resolution of 0.5°×0.5°. The comparison of the "interactive" and "prescribed" dust simulations allows for characterizing feedback between Mars dust and radiation. The comparison of simulations with 2°×2° and 0.5°×0.5° addresses questions related to the horizontal model resolution and quality of the Martian dust cycle simulation. A particular focus are the implications for the dynamics of Mars dust storms.
DOI: 10.25946/23642190.v1
title: Survey Data & Interview Data

description: This research will investigate the views of SMEs on how they perceive modern (digital) LAM techniques and what their motivations are for adopting these techniques in response to digital disruption impacting their industry. The focus of this research is thus to advance the understanding of modern LAM techniques and develop a framework that may guide the SMEs in this respect. Recent developments in digital marketing media, in particular with social media has changed forever how people communicate. SMEs are being encouraged by their industry bodies and government to have an online presence and to keep pace with these developments. There is however, little research and understanding about how digital marketing media especially social media, affects personal behaviour and on how SMEs can take advantage of informal communication networks effectively (Wilcox & Stephen, 2014). This research will fill this gap and also assist marketers to better understand how the use and reliance on technology can improve message digestion and influence. This research will also contribute to the development of a touchpoint analysis model to categorise the mix of LAM techniques adopted by SMEs.
DOI: 10.6084/m9.figshare.10012907.v1
title: Price History 21.10.19 (1).xlsx

description: <b>Under the influence of human factors the climate has changed significantly. And first of all, this is due to the change in the proportionality and concentration of greenhouse gases in the atmosphere (water vapor, carbon dioxide, methane, ozone, PFC (perfluorocarbons). </b><b>In this paper analyzed a</b><b> dynamics of greenhouse gas emissions. </b><b>Climate change has many consequences for human health throughout the world. Forecasts of greenhouse gas emissions growth an increase in the direct and indirect burden of an infectious and non-infectious disease, effects on nutrition and water security and other social disruptions.</b><b> </b><b>With the intensification of greenhouse effect, the global average temperature gradually increases, and the atmospheric CO</b><b>2 </b><b>concentration has exceeded 400 ppm. The method of energy balance was featured to simulate the trends in Greenhouse Gas Emission Forecast until 2030 by Sector. Through sensitivity analysis, we found anthropogenic CO</b><b>2 </b><b>emissions from people (cars and households) would be decrease as the major factor influencing the above trends. The main emissions will be associated with industry but this emission can be reduced if local Government will want to achieve the Paris Agreement goal. </b>
DOI: 10.6084/m9.figshare.23834838.v2
title: Raw data for "The laminar pattern of proprioceptive activation in human primary motor cortex"

description: Raw data for "The laminar pattern of proprioceptive activation in human primary motor cortex"
DOI: 10.6084/m9.figshare.28511969.v1
title: 2017China-Provincial Biodiversity Footprint Result Data

description: 2017China-Provincial Biodiversity Footprint Result Data
DOI: 10.17632/5t8kdsjsw5
title: Elizondo et al TGM2-expressing macrophages modulate adipose tissue inflammation

description: Data for a submission to Frontiers in Immunology. Elizondo et al, TGM2-expressing macrophages modulate adipose tissue inflammation.
DOI: 10.6084/m9.figshare.29091899.v1
title: FIG8.docx

description: <b>Figure 8.</b> Error distribution of different models in predicting FP.
DOI: 10.17632/zz768t4fs5
title: A Deep Learning Approach for Automated Detection of Shallow Anterior Chamber Depth Based on Hidden Features of Fundus Photographs

description: The datasets are not redistributable to researchers other than those engaged in the Institutional Review Board-approved research collaborations with the B&VIIt Eye Center, South Korea. The datasets utilized during this study are not publicly available due to reasonable privacy and security concerns. Instead, a sample anonymized fundus photography data with shallow and deep ACD is available in the publicly accessible source. Note that this was not the exact data used in the research, but is a cleaned-up reproduction of our study's key insight.

In the current study, we analyzed the preoperative ocular data of healthy subjects who intended to undergo refractive surgery at the B&VIIT Eye Center from January 2015 to December 2016. All patients underwent preoperative measurements of best-corrected distance visual acuity and manifest refraction, slit-lamp examinations of the anterior segment. We used macula-centered fundus photographs containing posterior pole of eyes which were obtained during preoperative examination. Non-mydriatic fundus photographs were taken using two different retinal cameras including Maestro2 non-mydriatic retinal camera (Topcon Corporation, Tokyo, Japan) and CR-2 non-mydriatic retinal camera (Canon, Tokyo, Japan). Non-contact tonometry and pachymetry device (NT-530P; Nidek Co., Ltd., Aichi, Japan) was used to evaluate the intraocular pressure and central corneal thickness. All these measurements were carried out by trained medical workers and ophthalmologists.

The measurement of ACD was performed using a Pentacam HR Scheimpflug device (Oculus Optikgeräte GmbH, Wetzlar, Germany). Currently, there is the lack of universal definition of shallow ACD due to ethnic differences. In this study, we defined shallow ACD as an ACD measurement of 2.80 mm or lower according to the previous study (Malyugin et al., 2012). This criterion was adopted in both classification and feature map generation. 

All fundus photographs were de-identified to share publicly.

Reference
Malyugin, B.E., Shpak, A.A., Pokrovskiy, D.F., 2012. Accommodative changes in anterior chamber depth in patients with high myopia. Journal of Cataract & Refractive Surgery 38, 1403–1407. https://doi.org/10.1016/j.jcrs.2012.04.030
DOI: 10.6084/m9.figshare.28853564.v1
title: <b>Code and Partial Test Data</b>

description: 代码和测试数据
DOI: 10.6084/m9.figshare.5593960.v1
title: Physical and mental health status in Toxoplasma-infected women before and three years after they learn about their infection: Manipulation or side-effects of impaired health?

description: Raw data related to the paper "Physical and mental health status in Toxoplasma-infected women before and three years after they learn about their infection: Manipulation or side-effects of impaired health?"Šebánková B., Flegr J.Front. Ecol. Evol. 5:144. doi: 10.3389/fevo.2017.00144<br><br>AbstractLatent toxoplasmosis is known to be associated with specific changes in animal and human behavior and human personality. Many toxoplasmosis-associated shifts, such as an extroversion-introversion shift or a trust -suspicion shift, go in opposite directions in men and women. The stress coping hypothesis suggests that such behavioral effects of toxoplasmosis are side effects of chronic stress caused by lifelong parasitosis and associated health disorders. Several studies have searched for, and typically found, indices of impaired health in infected subjects. However, subjects were always aware of their toxoplasmosis status, which could influence obtained data and cause false-positive results of the studies. Here we searched for differences in physical and mental health status among 39 <i>Toxoplasma</i>-infected and 40 <i>Toxoplasma</i>-free female university students who completed identical questionnaires (N-70, and anamnestic questionnaire), before and 3 years after they were informed of their toxoplasmosis status. Our results showed that infected women showed indices of poorer health status, not only after, but also before they were informed of their infection. In accordance with previously published data, these indices were more numerous and stronger in Rh-negative than in Rh-positive women. Present results suggest that observed indices of poorer health and symptoms of chronic stress in <i>Toxoplasma</i>-infected subjects are real. Due to its high (30%) prevalence, toxoplasmosis could represent an important factor for public health.<br>
DOI: 10.6084/m9.figshare.17072612.v1
title: [BRP] FFPE VCF file and panel bed

description: Variant calling with the Burning Rock Oncopanel
DOI: 10.17632/rs9mzpddmc
title: Data for: Leveraging local knowledge or global advantage: Cross border bank mergers and acquisitions in Africa

description: Two datasets covering the abnormal returns of bank acquisitions on the African continent over the period 2000-2017. Control variables include bank level data from SNL, macro-economic and institutional data from the worldbank and deal level data from SDC platinum.
DOI: 10.6084/m9.figshare.1157836.v1
title: Data set: A colloidal singularity reveals the crucial role of colloidal stability for nanomaterials in-vitro toxicity testing: nZVI-microalgae colloidal system as a case study

description: Files compilling data from the article "A colloidal singularity reveals the crucial role of colloidal stability for nanomaterials in-vitro toxicity testing: nZVI-microalgae colloidal system as a case study"<br>By Gonzalo, S.1‡; Llaneza, V.2‡; Pulido-Reyes, G.1,3‡; Fernández-Piñas, F.3; Bonzongo, J.C.2; Leganes, F.3; Rosal, R.1,4; García-Calvo E.1,4 & Rodea-Palomares, I3<br>1: Departamento de Ingeniería Química, Universidad de Alcalá, E-28871, Alcalá de Henares, Madrid, Spain.<br>2: Department of Environmental Engineering Sciences, University of Florida, Gainesville, Florida, USA.<br>3: Departamento de Biología, Facultad de Ciencias, Universidad Autónoma de Madrid, Cantoblanco, E-28049 Madrid, Spain.<br>4: Advanced Study Institute of Madrid, IMDEA Agua, Parque Científico Tecnológico, Alcalá de Henres, 28805 Madrid, Spain.
DOI: 10.6084/m9.figshare.24396874.v3
title: Santiago-Rosario et al. American Journal of Botany 2024_Supplementary Information

description: This dataset was sourced from the Atlas of Living Australia, and the host-per-mistletoe taxon associations were derived from the available data.<b>Supplementary Table 1</b>: Complete dataset extracted from the Atlas of Living Australia for mistletoes and host occurrence records. <b>Supplementary Table 2</b>: Mistletoe prevalence (percentage) by host order for each genus included in the study, alongside the total percentage of hosts represented in the analysis.<b>Supplementary Table 3</b>: Mistletoe prevalence (percentage) by host family for each genus included in the study, alongside the total percentage of hosts represented in the analysis.<b>Supplementary Table 4</b>: Host ordinal phylogenetic diversity, mean phylogenetic distance, and mean nearest taxon distance per mistletoe genus. <b>Supplementary Table 5</b>: Host familial phylogenetic diversity, mean phylogenetic distance, and mean nearest taxon distance per mistletoe genus. For Supplementary Table 4 and 5 the columns are described as follows:<b>PD</b>= Phylogenetic diversity<b>sesPD</b>= Standardized effect size of phylogenetic diversity<b>sesPD P-values</b>=P-value associated with the standardized effect size of phylogenetic diversity<b>MPD</b>= Mean phylogenetic distance<b>sesMPD</b>= Standardized effect size of mean phylogenetic distance<b>sesMPD P-values</b>=P-value associated with the standardized effect size of mean phylogenetic distance<b>MNTD</b>= Mean nearest taxon distance<b>sesMNTD</b>= Standardized effect size of mean nearest taxon distance<b>sesMNTD P-values</b>=P-value associated with the standardized effect size of mean nearest taxon distance
DOI: 10.6084/m9.figshare.24592338.v1
title: Data to Analysis of heavy precipitation-induced rill erosion

description: Data to the article "Analysis of heavy precipitation-induced rill erosion" (DOI: 10.1007/s12665-024-11671-6)Data content: DEMs and orthomosaics of eroded croplands as a result of photogrammetry using DJI P4 RTK.