cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/inscriptifact-ouc110602537
title: Persepolis Fortification Aramaic Text 461, PFAT 461

description: [Text Description:] Administrative text with seals PFATS 0433, illegible seal ❧ [Text or Publication Number Note:] PFAT 461, Bowman 461 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impression PFATS 0433 on reverse. Illegible seal impression on upper edge.
DOI: 10.25549/inscriptifact-ouc110598577
title: Persepolis Fortification Anepigraphic Tablet 0850.103, PFAnep 0850.103

description: [Text Description:] Administrative text with seals PFUTS 0052s; PFUTS 0053. ❧ [Text or Publication Number Note:] PFAnep 0850.103, PFUT 0850-103 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impressions PFUTS 0052s on obverse; PFUTS 0053 on left edge.
DOI: 10.25549/inscriptifact-ouc1sto1608518
title: InscriptiFact -- an image database of inscriptions and artifacts

description: The InscriptiFact Collection is designed to allow access via the Internet to high-resolution images of ancient inscriptions and artifacts, primarily from the Near Eastern and Mediterranean Worlds. The targeted inscriptions constitute some of the world’s earliest written records, which are mostly housed in a number of international museums and libraries, as well as field projects where inscriptions still remain in situ. Included, for example, are, selected Dead Sea Scrolls; cuneiform tablets from Mesopotamia, Persia, Canaan and Egypt; early Jewish papyri from Egypt; lapidary inscriptions, primarily from Jordan, Lebanon and Cyprus; inscriptions on a variety of hard media (e.g., ostraca, copper, semi-precious stones, jar handles) mostly written in early Canaanite, Phoenician, Hebrew, Aramaic, Ammonite and Edomite; and much more. These ancient texts are foundational documents that serve as a point of reference for Judaism, Christianity, Islam and the cultures out of which they emerged. The name "InscriptiFact" is intended to convey the concept of a scholarly archive based on "facts" about "inscriptions" and "artifacts." West Semitic Research Project (WSRP) under the auspices of the University of Southern California (USC) is broadly acknowledged as a leader in the application of photographic and digital technologies to capture and analyze data of ancient texts. The West Semitic Research image archive now contains approximately 1,500,000 images. Important! Search terms with more than one word or number need to be enclosed in quotation marks.Guide to Searching InscriptiFact
DOI: 10.25549/inscriptifact-ouc110602523
title: Persepolis Fortification Aramaic Text 460, PFAT 460

description: [Text Description:] Administrative text with seals PFATS 0432s, PFATS 0063s, PFATS 0010s ❧ [Text or Publication Number Note:] PFAT 460, Bowman 460 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Aramaic ❧ [Physical Object Description:] Clay tablet with ink inscription. Seal impressions PFATS 0432s on upper edge; PFATS 0063s on bottom edge; PFATS 0010s on flat edge.
DOI: 10.25549/inscriptifact-ouc1sto1608136
title: InscriptiFact -- an image database of inscriptions and artifacts

description: The InscriptiFact Collection is designed to allow access via the Internet to high-resolution images of ancient inscriptions and artifacts, primarily from the Near Eastern and Mediterranean Worlds. The targeted inscriptions constitute some of the world’s earliest written records, which are mostly housed in a number of international museums and libraries, as well as field projects where inscriptions still remain in situ. Included, for example, are, selected Dead Sea Scrolls; cuneiform tablets from Mesopotamia, Persia, Canaan and Egypt; early Jewish papyri from Egypt; lapidary inscriptions, primarily from Jordan, Lebanon and Cyprus; inscriptions on a variety of hard media (e.g., ostraca, copper, semi-precious stones, jar handles) mostly written in early Canaanite, Phoenician, Hebrew, Aramaic, Ammonite and Edomite; and much more. These ancient texts are foundational documents that serve as a point of reference for Judaism, Christianity, Islam and the cultures out of which they emerged. The name "InscriptiFact" is intended to convey the concept of a scholarly archive based on "facts" about "inscriptions" and "artifacts." West Semitic Research Project (WSRP) under the auspices of the University of Southern California (USC) is broadly acknowledged as a leader in the application of photographic and digital technologies to capture and analyze data of ancient texts. The West Semitic Research image archive now contains approximately 1,500,000 images. Important! Search terms with more than one word or number need to be enclosed in quotation marks.Guide to Searching InscriptiFact
DOI: 10.15468/dl.t86t68
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lomatia hirsuta obliqua",
 "Country is Chile",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027319-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc110598448
title: Persepolis Fortification Anepigraphic Tablet 0847.101, PFAnep 0847.101

description: [Text Description:] Administrative text with seal PFUTS 0046. ❧ [Text or Publication Number Note:] PFAnep 0847.101, PFUT 0847-101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impression PFUTS 0046 on obverse, reverse, left edge.
DOI: 10.25549/inscriptifact-ouc110598474
title: Persepolis Fortification Anepigraphic Tablet 0847.101, PFAnep 0847.101

description: [Text Description:] Administrative text with seal PFUTS 0046. ❧ [Text or Publication Number Note:] PFAnep 0847.101, PFUT 0847-101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impression PFUTS 0046 on obverse, reverse, left edge.
DOI: 10.25549/inscriptifact-ouc110598446
title: Persepolis Fortification Anepigraphic Tablet 0846.103, PFAnep 0846.103

description: [Text Description:] Administrative text with seal PFUTS 0130s. ❧ [Text or Publication Number Note:] PFAnep 0846.103, PFUT 0846-103 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impression PFUTS 0130s on obverse.
DOI: 10.25549/inscriptifact-ouc110598451
title: Persepolis Fortification Anepigraphic Tablet 0847.101, PFAnep 0847.101

description: [Text Description:] Administrative text with seal PFUTS 0046. ❧ [Text or Publication Number Note:] PFAnep 0847.101, PFUT 0847-101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Text ❧ [Physical Object Description:] Clay tablet with seal impression PFUTS 0046 on obverse, reverse, left edge.
DOI: 10.25549/japan-posters-ouc11966928
title: Japanese Poster Collection

description: The Japanese poster collection contains 46 posters on the following topics: Japanese products and design; railways, ocean liners and tourism; Japanese art and design exhibitions; Japanese imperial modernity (including colonies in Korea, Manchuria, and northeastern China); and Japanese Ministry and Telecommunications campaigns. The posters reflect both Japanese painting techniques (nihonga) and Western painting techniques (yōga). Pictorial styles range from neo-traditionalism derived from woodblock prints (ukiyoe) to modernism. The prominence of beautiful women (bijin) as an aesthetic category in the collection is of note. Most of the posters were produced using the offset lithographic printing technique. The posters were created by prominent designers, commissioned by large Japanese corporations and government ministries, and produced by Japan's major offset printing companies. See also the finding aid.
DOI: 10.5281/zenodo.16778426
title: Supplemental Table S1
DOI: 10.5281/zenodo.16778425
title: Supplemental Table S1
DOI: 10.15468/dl.earkqg
title: Occurrence Download

description: A dataset containing 1369069 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is GBR.1.17_1",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1369069 records from 257 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028357-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xq36vw
title: Occurrence Download

description: A dataset containing 885 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phalloceros harpagos)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 885 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028385-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16777475
title: ClinvArbitration data release - August 2025

description: This file is a tarball representing the ClinvArbitration re-summary of ClinVar's raw submissions. The ClinvArbitration project represents an altered aggregation of the individual submissions, preferring to break ties when presented with submissions which don't all agree, instead of defaulting to a rating of "conflicting interpretations of pathogenicity". This leads to more variants being presented as either B/LB, or P/LP, and a reduced grey area between.

This data release contains a two items



The results of the re-interpretation of ClinVar, presented as a Hail Table.

A second project to build on top of this and deliver annotations approximating the PM5 consequence category according to the ACMG criteria, also as a Hail table


This second part is not easily applied by existing tools, and represents the following:



For each Pathogenic SNV in ClinVar, we annotate the variants using BCFtools CSQ. For each Pathogenic SNV which is also a Missense variant, we reogrganise the data to be indexed on Transcript and Codon number. This can then be inverted to annotate genetic variation - if a variant is a Missense, and a ClinVar pathogenic Missense variant exists affecting the same Codon, we annotate the Missense with co-located known pathogenic ClinVar entries, in case this contributes to the interpretation of the variant under investigation.


 

Two scripts in the ClinvArbitration repository have been created, one for each of these Hail Tables, to revert their contents back to TSV format for general use. The TSV representations of this data are 34x larger than the Hail Tables, so I've made the choice to distribute the Hail Table + write an adapter, instead of distributing all possible data formats. See the "convert_X" Scripts in the ClinvArbitration scripts folder.

I would like to acknowledge that since this side project started, a substantial curation effort has been made in ClinVar, so the gap between the standard and re-interpreted ClinVar results has closed substantially. The exact data format presented here is required by Talos, a whole-Exome/Genome variant prioritisation tool, so despite the increasing consistency between the two results sets this exact data format should continue to be distributed.

These monthly summaries were previously released on the GitHub Release Page for the ClinvArbitration tool, but the max data size for attachments has been reached. Going forward, Zenodo makes sense as a home for release of these files.
DOI: 10.15468/dl.6bffk5
title: Occurrence Download

description: A dataset containing 709 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hoplobrotula armata"
 ]
}

 The dataset includes 709 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028387-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ddrxa9
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Philippines",
 "TaxonKey is Ophiorrhiza pulgarensis"
 ]
}

 The dataset includes 15 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028386-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xaed4d
title: Occurrence Download

description: A dataset containing 703774 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Pygochelidon cyanoleuca)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 703774 records from 198 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028367-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5asqm2
title: Occurrence Download

description: A dataset containing 645719 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Hypericum perforatum",
 "Year 1957-2022"
 ]
}

 The dataset includes 645719 records from 3416 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028361-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17334281
title: Glottography dataset derived from Denevan 1966 "The aboriginal cultural geography of the Llanos de Mojos of Bolivia"

description: Cite the source of the dataset as:




Denevan, William M. 1966. The aboriginal cultural geography of the Llanos de Mojos of Bolivia. (Ibero-Americana, 48.) Berkeley: University of California Press.
DOI: 10.15468/dl.ka3acr
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Habenaria patentiloba Ames"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0236386-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ejss8z
title: Occurrence Download

description: A dataset containing 255450988 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Year is 2018,2020"
 ]
}

 The dataset includes 255450988 records from 757 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072948-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngrjq8
title: Occurrence Download

description: A dataset containing 5855 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ceanothus americanus L.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5855 records from 142 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075723-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g76esz
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Habenaria polyschista Schltr."
 ]
}

 The dataset includes 6 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0236430-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2jbsjs
title: Occurrence Download

description: A dataset containing 653921949 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 653921949 records from 13833 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002092-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.un869d
title: Occurrence Download

description: A dataset containing 104422 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Hydrocharitaceae"
 ]
}

 The dataset includes 104422 records from 899 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014834-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15336512
title: hedychium_coronarium_decontaminated_FSCR.fasta.gz
DOI: 10.5281/zenodo.15336513
title: hedychium_coronarium_decontaminated_FSCR.fasta.gz
DOI: 10.15468/dl.d5t2xw
title: Occurrence Download

description: A dataset containing 272067 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Hymenophyllaceae"
 ]
}

 The dataset includes 272067 records from 744 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014840-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28927595
title: V18 Software updates for Calibration Paper

description: Updates to geolocation system analysis software for calibration analysis. CEAS Space systems submittal May 2025
DOI: 10.5281/zenodo.15336514
title: herklotsichthys_quadrimaculatus_decontaminated_FSCR.fasta.gz
DOI: 10.5281/zenodo.15336515
title: herklotsichthys_quadrimaculatus_decontaminated_FSCR.fasta.gz
DOI: 10.15468/dl.nkkxb9
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is da86174a-a605-43a4-a5e8-53d484152cd3",
 "TaxonKey is Hosta sieboldiana (Hook.) Engl."
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014851-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15336520
title: holcus_rigidus_decontaminated_FSCR.fasta.gz
DOI: 10.5281/zenodo.15336521
title: holcus_rigidus_decontaminated_FSCR.fasta.gz
DOI: 10.15468/dl.xrx2bp
title: Occurrence Download

description: A dataset containing 4057 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Hypodematiaceae"
 ]
}

 The dataset includes 4057 records from 138 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014852-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mnnm8c
title: Occurrence Download

description: A dataset containing 954930009 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 954930009 records from 18424 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0191993-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14726040
title: Facile Fabrication of Large-Area Biofunctionalized Metallic Nanostructures for High Performance Affinity Plasmonic Biosensors

description: DATASET DESCRIPTION

This Dataset contains the raw data from the following publication:------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Facile Fabrication of Metallic Nanostructures on Large Areas for High Performance Plasmonic BiosensorsDario Cattozzo Mor, Adam Benjamin Plšek, Prasanth Asokan, Van Truc Vu, Gizem Aktug, Elena Giordani, Elena Ricciardi, Jiri Perutka, Kamil Önder, Ladislav Fekete, Zdeněk Hubička, Chun Jen Huang, Jakub Dostalek**corresponding author: dostalek@fzu.cz (J. Dostalek)Advanced Materials Technologies, 2025------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------When using this data in any form please refer to the above-mentioned publication.