cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7525026
title: CATH-KinFams: CATH Protein Kinase classification alignments and Hidden Markov Models

description: CATH KinFams are protein kinase domain families classified according to functional similarity based on SDP. In this deposition we make available 2,210 KinFams sequence alignments alongside Hidden Markov Models built from them to be used with HMMER3. A concatenated library 'kinases_4.3-FF-seed.hmm' is also available to scan against the whole KinFams dataset. The Zenodo deposition contains: kinfams-cath-4.3-seed-alignments.tar.gz - KinFams FASTA file alignments with headers 'UniProt_ID/start-stop' i.e. A8XMX4/281-587 kinfams-cath-4.3-seed-hmms.tar.gz - HMMs for each individual KinFam and concatenated in a HMM library.
DOI: 10.5281/zenodo.7541872
title: CATH-KinFams: CATH Protein Kinase classification alignments and Hidden Markov Models

description: CATH KinFams are protein kinase domain families classified according to functional similarity based on SDP. In this deposition we make available 2,210 KinFams sequence alignments alongside Hidden Markov Models built from them to be used with HMMER3. A concatenated library 'kinases_4.3-FF-seed.hmm' is also available to scan against the whole KinFams dataset. The Zenodo deposition contains: kinfams-cath-4.3-seed-alignments.tar.gz - KinFams FASTA file alignments with headers 'UniProt_ID/start-stop' i.e. A8XMX4/281-587 kinfams-cath-4.3-seed-hmms.tar.gz - HMMs for each individual KinFam and concatenated in a HMM library. kinfams-cath-4.3-seed-mda-strings - Multi-Domain-Architecture string assignment for each sequence in the KinFams dataset.
DOI: 10.6073/pasta/7b44d641e3a49e5251a468d0bfa90bd3
title: CGR02 Sweep sampling of Grasshoppers on Konza Prairie LTER watersheds

description: Sweep samples were taken for grasshoppers (Acrididae) at two sites for each of 14 Konza Prairie LTER watersheds. Samples are taken in late July to early August. At each site on each occasion, 10 sets of 20 sweeps (200 sweeps total) are taken. Stored data include for each site on each occasion: total number of each species (all instars combined) collected and total number for each instar for each species (200 sweeps combined).
DOI: 10.6073/pasta/5709474b3cbe9156bb02054a9f5ea214
title: CGR03 Effects of spring burning on Grasshopper Nymphs (1982)

description: Sweep samples were taken for grasshoppers (Arcididae) at two upland sites on 5 watersheds at approximately two week intervals, June-Sept 1982. At each site on each occasion, 20 sets of 20 sweeps (400 sweeps total) were taken. Stored data include for each site on each occasion: total number of each species (all instars combined) collected and total number for each instar for each species (400 sweeps combined).
DOI: 10.6073/pasta/eab05766ab68962fd3bc57557728ff5d
title: CGR05 Effects of fire frequency on composition of grasshopper assemblages (1983)

description: Sweep samples were taken for grasshoppers (Acrididae) at two sites for each of 14 Konza Prairie LTER watersheds. Samples are taken in late July to early August. At each site on each occasion, 10 sets of 20 sweeps (200 sweeps total) are taken. Stored data include for each site on each occasion: total number of each species (all instars combined) collected and total number for each instar for each species (200 sweeps combined).
DOI: 10.21227/a36n-2s57
title: Tunisian primary school teachers ICT uses DATASET

description: Nowadays, we can notice that the integration of digital technology in the professional practices of teachers is becoming more and more widespread in the Tunisian education system. Nevertheless, there is a significant gap between the uses announced by the noosphere and the uses observed among Tunisian teachers. Our study aims to closely analyze the professional uses of ICT by primary school teachers in Tunisia while trying to assess the various factors associated with this use to understand the causes of these differences. Initial theoretical work was necessary to define the concept of usage and present the various factors associated with it in the scientific literature. Then, we conducted a quantitative study with 350 French Language teachers in the primary cycle in Tunisia. The results revealed a weak ICT integration correlated to a set of personal and institutional factors. However, these correlations, by themselves, are not significant enough to explain these low uses. This allows us to explore new approaches in relation to the social dimension of the concept of usage, which considers the teacher as an active social actor who constructs his or her uses in interaction with other actors, hence the importance of considering collective dynamics in the construction of teachers' professional uses of ICT.
DOI: 10.6073/pasta/ec391d793531243ee81d51dc34243187
title: CMY01 Mycorrhizal colonization and plant community responses to long-term suppression of Mycorrhizal Fungi

description: Twenty replicate permanent 2x2 m plots were established in early 1991 along a randomly located transect, with a 2m space between each plot, on the following watersheds: 1B, 1D, annually burned HQB, 10B, 20D and infrequently burned HQB. Ten of the plots were randomly assigned as long-term mycorrhizal suppression plots. In each of these plots, AM fungi were suppressed by the application of the fungicide benomyl as a soil drench (7.5 liters per plot) at the rate of 1.25 g/m2 (active ingredient). The mycorrhizal suppression plots were treated biweekly throughout each growing season (April through October) beginning in 1991. The control plots each received no fungicide, but an equivalent volume of water (7.5 liters) was applied biweekly. To evaluate the effectiveness of the fungicide, three soil cores (2.5 cm diameter x 14 cm deep) were removed from both fungicide-treated and control plots each October throughout the study. Roots were extracted from the soil, washed free of soil, stained in trypan blue (Phillips and Hayman, 1970), and examined microscopically to assess percentage root colonization by mycorrhizal fungi using a Petri dish scored in 1-cm squares (Daniels et al.1981).
DOI: 10.6073/pasta/41ae4d4bfe08cad81c58c89bfabd7c68
title: CPC01 Annual census of Greater Prairie Chickens on leks at Konza Prairie

description: Location of leks and number of birds per lek are censused during late April and early May across Konza Prairie to document year to year densities of greater prairie chickens. This dataset is continued by CPC02 after 04/19/1999.
DOI: 10.5281/zenodo.7517193
title: Data for the paper, "Social media data for environmental sustainability: a critical review of opportunities, threats and ethical use"

description: These data were collected for the paper, "Social media data for environmental sustainability: a critical review of opportunities, threats and ethical use" published in One Earth. It includes a database of studies applying social media data in environmental sustainability research, which were collected and reviewed in full by the authors. Rather than providing a comprehensive summary of all relevant literature like in a systematic review, our objective was to take stock and evaluate the previous body of work in the field in order to promote conceptual innovation from its critical examination. Building on a set of 169 studies collected in a previous systematic review of social media data applications in environmental research (Ghermandi and Sinclair 2019), the database includes additional relevant studies that were identified by snowballing previous references and adding further gray and scientific academic articles known to the authors. For studies to be included in our analysis, they had to involve the use of data from one or more social media platforms and investigate human interactions with and/or impacts on the environment. We relied on a broad definition of social media including any website or application that enables users to create and share content or to participate in social networking (e.g., blogging sites, recommendation sites, and online forums). We further strengthened the analysis by including insights from additional literature on social media that do not have a direct application to environmental sustainability (e.g., studies on biases in social media data). The final database consists of 415 studies, which were published between 2011 and 2021. Ghermandi, Andrea, and Michael Sinclair. "Passive crowdsourcing of social media in environmental research: A systematic map." <em>Global environmental change</em> 55 (2019): 36-47.
DOI: 10.5281/zenodo.7517192
title: Data for the paper, "Social media data for environmental sustainability: a critical review of opportunities, threats and ethical use"

description: These data were collected for the paper, "Social media data for environmental sustainability: a critical review of opportunities, threats and ethical use" published in One Earth. It includes a database of studies applying social media data in environmental sustainability research, which were collected and reviewed in full by the authors. Rather than providing a comprehensive summary of all relevant literature like in a systematic review, our objective was to take stock and evaluate the previous body of work in the field in order to promote conceptual innovation from its critical examination. Building on a set of 169 studies collected in a previous systematic review of social media data applications in environmental research (Ghermandi and Sinclair 2019), the database includes additional relevant studies that were identified by snowballing previous references and adding further gray and scientific academic articles known to the authors. For studies to be included in our analysis, they had to involve the use of data from one or more social media platforms and investigate human interactions with and/or impacts on the environment. We relied on a broad definition of social media including any website or application that enables users to create and share content or to participate in social networking (e.g., blogging sites, recommendation sites, and online forums). We further strengthened the analysis by including insights from additional literature on social media that do not have a direct application to environmental sustainability (e.g., studies on biases in social media data). The final database consists of 415 studies, which were published between 2011 and 2021. Ghermandi, Andrea, and Michael Sinclair. "Passive crowdsourcing of social media in environmental research: A systematic map." <em>Global environmental change</em> 55 (2019): 36-47.
DOI: 10.6073/pasta/c4b0d18043f84c5a879d799058df7bc0
title: CPC02 Census of greater prairie chicken on leks at Konza Prairie

description: Location of leks and number of birds per lek are censused during late April and early May across Konza Prairie to document year to year densities of greater prairie chickens.
DOI: 10.6073/pasta/203f2a0e037cee239eb3a6d1e425b245
title: CSA02 Soil Macroarthropod densities and biomass on annually burned and unburned watersheds

description: Belowground densities and biomass of macroarthropods on annually were measured by hand-sorting techniques. Total herbivore biomass was greater in soils of annually burned sites, and was composed largely of white grubs (Scarabaeidae).
DOI: 10.6084/m9.figshare.19719068
title: Two of the most common crustacean zooplankton <i>Meganyctiphanes norvegica</i> and <i>Calanus</i> spp. produce sounds within the hearing range of their fish predators

description: Sound is an effective channel for the transfer of information underwater. While it is known that fish and whales can use sound for communication, and as a cue to localise predators and prey, much less is known about sound production in invertebrates. Here we describe sounds produced by two of the most common marine crustacean zooplankton in the Northern hemisphere: Northern krill (<i>Meganyctiphanes norvegica</i>) and copepods (<i>Calanus</i> spp.). The recorded sounds were taxon-specific and within the hearing range of common planktivorous fish. We recorded similar sounds in the laboratory and in the field. In krill, the sound co-occurred with a tail flip, and the amplitude of the sound was correlated to the displacement distance of the animal, indicating a potential sound producing mechanism. Our findings highlight the possibility that zooplankton sounds could be used as a cue for their predators and for intraspecific communication.
DOI: 10.6084/m9.figshare.19719068.v1
title: Two of the most common crustacean zooplankton <i>Meganyctiphanes norvegica</i> and <i>Calanus</i> spp. produce sounds within the hearing range of their fish predators

description: Sound is an effective channel for the transfer of information underwater. While it is known that fish and whales can use sound for communication, and as a cue to localise predators and prey, much less is known about sound production in invertebrates. Here we describe sounds produced by two of the most common marine crustacean zooplankton in the Northern hemisphere: Northern krill (<i>Meganyctiphanes norvegica</i>) and copepods (<i>Calanus</i> spp.). The recorded sounds were taxon-specific and within the hearing range of common planktivorous fish. We recorded similar sounds in the laboratory and in the field. In krill, the sound co-occurred with a tail flip, and the amplitude of the sound was correlated to the displacement distance of the animal, indicating a potential sound producing mechanism. Our findings highlight the possibility that zooplankton sounds could be used as a cue for their predators and for intraspecific communication.
DOI: 10.6073/pasta/d04abc9a9fe89a58e96d0764bee5bcf1
title: CSM01 Seasonal summary of numbers of small mammals on 14 LTER traplines in prairie habitats at Konza Prairie

description: Data set contains seasonal summaries (spring and autumn) of the number of individuals of each species of small mammal captured (relative abundance) on each grassland trapline. Each record contains year, season, trapline and number of individuals captured of each species. These live trap records are based on daily captures during two 4-day trapping periods in spring (late February to early April) and autumn (early October to mid-November) for each of 14 permanent traplines established on seven fire-grazing treatments (two traplines per treatment). These seven fire-grazing treatments include three sites that are grazed by bison (1 unburned, 1 annual burn and 1 4-year burn) and four sites that are not grazed by bison (1 unburned, 1 annual burn and 2 4-year burn).
DOI: 10.6073/pasta/8b5537cc4c2a02ffac5537b839da0e79
title: CSM02 Seasonal summary of numbers of small mammals on the four LTER gallery forest and limestone ledges traplines in wooded habitats at Konza Prairie

description: Data set contains seasonal summaries (spring, summer and autumn) of the number of individuals of each species of small mammal captured (relative abundance) on each woodland trapline. Each record contains year, season, trapline and number of individuals captured of each species. These live trap records are based on daily captures during a single 4-day trapping period in spring (early March to early April), summer (early July to late July) and autumn (mid-October to early December) for each of four permanent traplines established in two habitats (two traplines in gallery forest and two on limestone ledges). Bison did not graze any of the treatment units during the period of study.
DOI: 10.6073/pasta/7681f8f4635e117cf9fe180816b184b4
title: CSM03 Seasonal summary of numbers of small mammals on the two LTER traplines in planted grassland (Brome fields) habitats at Konza Prairie

description: Data set contains seasonal summaries (spring, summer and autumn) of the number of individuals of each species of small mammal captured (relative abundance) on each woodland trapline. Each record contains year, season, trapline and number of individuals captured of each species. These live trap records are based on daily captures during a single 4-day trapping period in spring (early March to early April), summer (early July to late July) and autumn (mid-October to early December) for each of four permanent traplines established in two habitats (two traplines in gallery forest and two on limestone ledges). Bison did not graze any of the treatment units during the period of study.
DOI: 10.6073/pasta/686dc8269e235a8b5d3f8ed994bec958
title: CSM04 Seasonal summary of numbers of small mammals on the eight LTER seasonal burn traplines in prairie habitats at Konza Prairie

description: Data set contains seasonal summaries (spring, summer and fall) of the number of individuals of each species of small mammal caught (relative density) on each grassland census line. Each record contains trapline, year of last fire and number of individuals per species. These live trap records are based on daily captures during three 4-day trapping peroids, March, July and October, for each of 20 permanent census lines established on 10 fire-grazing treatments (2 lines per treatment). These 10 fire-grazing treatments are one unburned, one annual burn and one 4- year burn site to be grazed by native ungulates and one unburned, one annual burn, four 4-year burn and one 10-year burn site not grazed by ungulates.
DOI: 10.6073/pasta/1cdd4786d89d6c4a0cc282b5bfb959ae
title: CSM05 Seasonal summary of numbers of small mammals on the six LTER traplines in prairie habitats on which fire regime has been reversed at Konza Prairie

description: Data set contains seasonal summaries (spring and autumn) of the number of individuals of each species of small mammal captured (relative abundance) on each grassland trapline. Each record contains year, season, trapline and number of individuals captured of each species. These live trap records are based on daily captures during a single 4-day trapping period in spring (mid-March to early April) and autumn (late October to early December) for each of six permanent traplines established on two fire treatments (three traplines per treatment). These two fire treatments include one treatment that was changed from a 20-year burn to an annual burn and one that was changed from an annual burn to 20 years between fires. Bison do not graze these two habitat types.
DOI: 10.18112/openneuro.ds004407.v1.0.0
title: Mental Imagery-based Fear Extinction
DOI: 10.5281/zenodo.7541919
title: ALL processed data of quantification of Total, viable and VC population

description: Processed data set of qPCR, PMA-qPCR and agar enumeration of the article. These data are sorted according to the D2O concentration used (0%, 25%, 50% or 75%), and according to the incubation time
DOI: 10.5281/zenodo.7541920
title: ALL processed data of quantification of Total, viable and VC population

description: Processed data set of qPCR, PMA-qPCR and agar enumeration of the article. These data are sorted according to the D2O concentration used (0%, 25%, 50% or 75%), and according to the incubation time
DOI: 10.5281/zenodo.7541963
title: ALL processed data of quantification of Total, viable and VC population

description: Processed data set of qPCR, PMA-qPCR and agar enumeration of the article. These data are sorted according to the D2O concentration used (0%, 25%, 50% or 75%), and according to the incubation time
DOI: 10.18112/openneuro.ds004393.v1.0.1
title: Fear in the mind's eye: the neural correlates of differential fear acquisision to imagined conditioned stimuli
DOI: 10.6073/pasta/72cdd9bfae49e1ed680888ecf8e2e181
title: CSM06 Seasonal summary of numbers of small mammals on miscellaneous traplines in prairie habitats that were trapped from 1 to 11 years at Konza Prairie

description: Data set contains seasonal summaries (spring, summer and autumn) of the number of individuals of each species of small mammal captured (relative abundance) on each prairie trapline. Each record contains year, season, trapline and number of individuals captured of each species. These live trap records are based on daily captures during 4-day trapping periods in spring (early March to early April), summer (late June to late July) and autumn (early October to mid-November) for each permanent trapline (two traplines per treatment). These treatments include annual burns, 2-year burns, 4-year burns and 10-year burns; none were grazed by bison. This data set includes 14 traplines sampled in autumn and spring and 30 traplines in summer.
DOI: 10.5517/ccdc.csd.cc2d6sv8
title: CCDC 2211070: Experimental Crystal Structure Determination

description: Related Article: Chetna Mohanty, Thierry Maris, James D. Wuest|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d6sxb
title: CCDC 2211072: Experimental Crystal Structure Determination

description: Related Article: Michael Lautmann, Thierry Maris, James D. Wuest|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d70g4
title: CCDC 2211275: Experimental Crystal Structure Determination

description: Related Article: Milan Gembicky|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d74wp
title: CCDC 2211412: Experimental Crystal Structure Determination

description: Related Article: Dong panpan|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d75g9
title: CCDC 2211430: Experimental Crystal Structure Determination

description: Related Article:  Mark M. Turnbull, Conor R. Milson, Diane A. Dickie|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2d7hcj
title: CCDC 2211737: Experimental Crystal Structure Determination

description: Related Article: Thierry Maris, Dominic Laliberté, James D. Wuest|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.