cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/2vpd3ddxtc.1
title: Alternative Subgraphs Assembly Line Balancing Problem with Resource Selection (ASRSALBP) Examples

description: This repository contains data on the Alternative Subgraphs Assembly Line Balancing Problem with Resource Selection. It provides a set of examplary problems for this kind of optimization problem and a set of optimization solutions.
DOI: 10.17632/pfgg68yd2y.1
title: CYP2B6 and CYP3A4 inhibition

description: Raw and relative data from chemical inhibition of CYP2B6 and CYP3A4 from Vivid bacculosomes. CYP2B6- and CYP3A4-transfected baculosomes from Vivid® CYP450 Blue and Red screening kits, respectively, were obtained from Life Technologies (Carlsbad, CA, USA). Potential inhibitors (and substrates) were screened as described in the Vivid® CYP450 Screening Kits User Guide. Decreased fluorescence due to chemical inhibition was measured on a Gen5 microplate reader (Synergy H1 Hybrid Reader, BioTek, Winooski, Vermont, USA) at 415/460 nm excitation/emission (CYP2B6) and 550/590 excitation/emission (CYP3A4) at automatic read intervals of 50 seconds for a 30-minute duration in kinetic assay mode. Results were exported into Microsoft Excel, where initial fluorescence was subtracted from fluorescence within the linear part of the curve to calculate change over time and averaged between replicates (n = 3-6).
DOI: 10.17632/8jv9fdz7jv.1
title: Anodic behavior analysis and electrochemical removal of the electrical discharge machining defect layer of René 88DT

description: Processing data of X-ray photoelectron spectroscopy and electrochemical impedance spectroscopy, curve data of breakdown voltage of passivation film
DOI: 10.17632/psjh4bf96r.37
title: GIMS - The Graz-Innsbruck Market System

description: GIMS is a z-Tree-based software for conducting asset market experiments.
DOI: 10.17632/y6y6cg94dw.2
title: Concentration of the pore water ions and grain size of bottom sediments and subsea permafrost from the Buor-Khaya Bay

description: This set contains a data on ionic composition of the interstitial water of bottom sediments and subsea permafrost as an indicator of the sedimentation and sea water spreading within thawed strata. Based on measurements of concentration of sodium (Na+), potassium (K+), calcium (Ca2+), and magnesium (Mg2+) cations, chlorides (Cl–) and sulphates (SO42–) in water extracts from bottom sediments and subsea permafrost deposits from three boreholes a spatial difference in salinisation dynamics of thawed strata within the Buor-Khaya Bay was shown. A significant difference between permafrost and unfrozen sections was recorded. The vertical pattern of the macroions in the unfrozen segment was formed under the influence of subsea thawing of permafrost, while the permafrost section was formed under freshwater conditions and evolved under the thawing, and consequent sea water spreading. The significant compositional irregularity of ionic compositional patterns in the thawed deposits is caused by differences in the particle size of sediments and hydrodynamics of the Arctic basin, and also can be explained by Quaternary eustatic events on the East Siberian Arctic shelf. Lithology, grain size and hydrological regime were considered to be the most important factors controlling concentration of sea water salt to thawed sediments. Over the roof of subsea permafrost in the Ivashkina Lagoon, the pronounced salinity maximum (50 g/L of Cl–) of interstitial water was observed. Consisting of moss debris, this segment promotes the accumulation of dissolved pore water compounds due to its high porosity and subsequent thawing of frozen rock.
DOI: 10.25573/data.10042418.v13
title: Barro Colorado Island, Lutz tower 48m_Relative Humidity

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Relative humidity, electronic sensor, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>
DOI: 10.17632/xjcf662svc.1
title: Trait Compassion, Human and Non-Human Animal Self-Similarity, Meat Avoidance Intent Data

description: "The data provided with this article is related to “Lowering Barriers to Plant-based Diets: The Effect of Human and Non-Human Animal Self-Similarity on Meat Avoidance Intent and Sensory Food Satisfaction.” [1]⁠ The connection between compassion and adherence to plant-based diets is intuitive. The first dataset is a sample of 372 participants in the United States that was collected online. Trait compassion, measured using the Santa Clara Brief Compassion Scale [2]⁠, is positively associated with intent to avoid dietary meat consumption. The second set of data, collected online from 131 participants in the United States, provides evidence for the underlying psychological process: the relationship between trait compassion and meat avoidance intent is serially mediated by perceived similarity to other human animals and non-human animals. Similarity scores were measured inversely as perceived distance using heat-map type questionnaire items based on inclusion-of-other-in-the-self (IOS, [3]⁠) and relational closeness scales [4]⁠. Demographic information, physical characteristics, and measurement of athletic identity are provided [5]⁠. These data can be used in psychology research on food studies specifically and to glean more insight on human’s connection with other animals in general [6], [7]⁠. The supplementary data on participants’ physical characteristics such as BMI, combined with measurement of athletic identity can inform sports and nutrition science. Survey print-outs, two datasets including scale items, and scripts for analysis are provided." from Pohlmann, Attila "Intransigent Compassion: Human and Non-Human Animal Self-Similarity and Meat Avoidance Intent Dataset." Data in Brief (forthcoming).
DOI: 10.17632/gbxrc5td2k.1
title: Validation of Statistical Controls for Consumer Protein Choice Dataset

description: Validation data for suggested covariates to control for influence of sensory properties, participant hunger level, food involvement, athletic identity, Body Mass Index, and predicted Basal Metabolic Rate on consumed amounts of beef jerky.
DOI: 10.5281/zenodo.5211240
title: Datasets for the manuscript "In silico proof of principle of machine learning-based antibody design at unconstrained scale"

description: The zip file contains dataset files for the manuscript "In silico proof of principle of machine learning-based antibody design at unconstrained scale"
DOI: 10.25573/data.10042460.v11
title: Barro Colorado Island, Lutz Catchment_Runoff

description: Barro Colorado Island (BCI), Conrad Catchment weirLocation 9°9'25.50"N, 79°50'53.09"W<br>Weir interval stage, avg. flow rate and total discharge<br>Lutz catchment is a 9.73ha protected watershed on BCIThe weir was constructed in 1972<br>
DOI: 10.25386/genetics.14829219.v1
title: Supplemental Material for Haines, Barradale, and Dumont 2021

description: Supplemental tables and code for replicating all analyses and figures in the main text. <br>
DOI: 10.25573/data.10042424.v13
title: Barro Colorado Island, Lutz tower 20m_Relative Humidity

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Relative humidity, electronic sensor, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>
DOI: 10.25573/data.10042433.v13
title: Barro Colorado Island, Lutz tower 42m_Air Temperature

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Air temperature, electronic sensor, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>
DOI: 10.25573/data.10042394.v13
title: Barro Colorado Island, Lutz tower 1m_Air Temperature

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Air temperature, electronic sensor, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>
DOI: 10.25573/data.10042409.v13
title: Barro Colorado Island, Lutz tower 20m_Air Temperature

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Air temperature, electronic sensor, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>
DOI: 10.25573/data.10042442.v13
title: Barro Colorado Island, Lutz tower 48m_Air Temperature

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Air temperature, electronic sensor, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>
DOI: 10.25390/caryinstitute.14294180
title: Table S1. Parasites associated with each unique carnivore-zoonosis pairing

description: This is a csv file of various disease associations found for carnivores with parasite species added (if available). Additionally, transmission mode from the Global Mammal Parasite Database (https://doi.org/10.1002/ecy.1799) is included when applicable. Columns in this dataset include species (species), disease name (disease), parasite name (ParasiteGMPD), and whether the transmission mode is close, non-close, vector-borne, or intermediate (columns close, nonclose, vector, and intermediate).
DOI: 10.25390/caryinstitute.14294180.v2
title: Table S1. Parasites associated with each unique carnivore-zoonosis pairing

description: This is a csv file of various disease associations found for carnivores with parasite species added (if available). Additionally, transmission mode from the Global Mammal Parasite Database (https://doi.org/10.1002/ecy.1799) is included when applicable. Columns in this dataset include species (species), disease name (disease), parasite name (ParasiteGMPD), and whether the transmission mode is close, non-close, vector-borne, or intermediate (columns close, nonclose, vector, and intermediate).
DOI: 10.25390/caryinstitute.14294180.v1
title: Carnivore Parasite Records

description: This is a csv file of various disease associations found for carnivores with parasite species added (if available). Additionally, transmission mode from the Global Mammal Parasite Database (https://doi.org/10.1002/ecy.1799) is included when applicable. Columns in this dataset include species (species), disease name (disease), parasite name (ParasiteGMPD), and whether the transmission mode is close, non-close, vector-borne, or intermediate (columns close, nonclose, vector, and intermediate).
DOI: 10.25573/data.10042397.v14
title: Barro Colorado Island, Lutz tower 42m_Relative Humidity

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Relative humidity, electronic sensor, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>
DOI: 10.25390/caryinstitute.14263913
title: Table S3. Carnivore trait data for the boosted regression tree reanalysis

description: A dataset containing traits collected for all currently described carnivore species. Each row is a species (309) and each column is a trait variable or label of interest (e.g., numbers of zoonoses, zoonotic host status, Web of Science hits). For a detailed description of the traits, how they are measured, and where they come from, see the Carnivore Trait Data Metadata document.
DOI: 10.25390/caryinstitute.14263913.v2
title: Table S3. Carnivore trait data for the boosted regression tree reanalysis

description: A dataset containing traits collected for all currently described carnivore species. Each row is a species (309) and each column is a trait variable or label of interest (e.g., numbers of zoonoses, zoonotic host status, Web of Science hits). For a detailed description of the traits, how they are measured, and where they come from, see the Carnivore Trait Data Metadata document.
DOI: 10.25390/caryinstitute.14263913.v1
title: Carnivore Trait Data

description: A dataset containing traits collected for all currently described carnivore species. Each row is a species (309) and each column is a trait variable or label of interest (e.g., numbers of zoonoses, zoonotic host status, Web of Science hits). For a detailed description of the traits, how they are measured, and where they come from, see the Carnivore Trait Data Metadata document.
DOI: 10.25390/caryinstitute.14294540
title: Table S2. Image attributions for Table 1 family representatives

description: Details the original sources and attribution for the images of representatives of each family used in Table 1 in the main text. For each family, we present the link to find the original image and the uploader and license of each image.
DOI: 10.25390/caryinstitute.14294540.v1
title: Table 1 Image Attribution

description: Details the original sources and attribution for the images of representatives of each family used in Table 1 in the main text. For each family, we present the link to find the original image and the uploader and license of each image.
DOI: 10.25390/caryinstitute.14294555
title: Table S5. Species range overlaps with the top 20% of population growth from 2000 to 2020

description: A csv file containing all carnivore species currently known to have an association with a zoonotic disease (species column) and whether each species' range overlaps with a raster detailing the top 20% of population growth from 2000 to 2020 (overlap_population_growth). A value of 1 in the overlap_population_growth column indicates that the species' range overlaps with this raster. The species range data are from the IUCN RedList and have been rasterized to 100 km<sup>2</sup>. Human population density data from 2000 and 2020 were obtained from WorldPop, resampled to 100 km<sup>2 </sup>to match the resolution of the species' range data, and used to obtain regions of population density increase.
DOI: 10.25390/caryinstitute.14294555.v2
title: Table S5. Species range overlaps with the top 20% of population growth from 2000 to 2020

description: A csv file containing all carnivore species currently known to have an association with a zoonotic disease (species column) and whether each species' range overlaps with a raster detailing the top 20% of population growth from 2000 to 2020 (overlap_population_growth). A value of 1 in the overlap_population_growth column indicates that the species' range overlaps with this raster. The species range data are from the IUCN RedList and have been rasterized to 100 km<sup>2</sup>. Human population density data from 2000 and 2020 were obtained from WorldPop, resampled to 100 km<sup>2 </sup>to match the resolution of the species' range data, and used to obtain regions of population density increase.
DOI: 10.25390/caryinstitute.14294555.v1
title: 2000-2020 Population Growth Overlap

description: A csv file containing all carnivore species currently known to have an association with a zoonotic disease (species column) and whether each species' range overlaps with a raster detailing the top 20% of population growth from 2000 to 2020 (overlap_population_growth). A value of 1 in the overlap_population_growth column indicates that the species' range overlaps with this raster. The species range data are from the IUCN RedList and have been rasterized to 100 km<sup>2</sup>. Human population density data from 2000 and 2020 were obtained from WorldPop, resampled to 100 km<sup>2 </sup>to match the resolution of the species' range data, and used to obtain regions of population density increase.
DOI: 10.25573/data.10042430.v12
title: Barro Colorado Island, Lutz tower 48m_Wind Direction

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Direction, Interval, mean vector<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>The data from 48m should be considered a separate data series from the data at 42m. Wind may have been affected by the distance to the top of the canopy.
DOI: 10.25573/data.10042427.v12
title: Barro Colorado Island, Lutz tower 48m_Wind Speed

description: Barro Colorado Island (BCI), Lutz catchment towerLocation 9°9'42.36"N, 79°50'15.67"W<br>Wind speed, electronic sensor, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>The data from 48m should be considered a separate data series from the data at 42m. Wind speed is significantly higher at 48m due to the distance to the top of the canopy.<br>
DOI: 10.6084/m9.figshare.15170061
title: Frontiers in Cell and Developmental Biology-All Raw Data

description: For reviewer
DOI: 10.6084/m9.figshare.15170061.v1
title: Frontiers in Cell and Developmental Biology-All Raw Data

description: For reviewer
DOI: 10.25573/data.10042406.v11
title: Barro Colorado Island, Lutz tower 48m_Solar Radiation, Pyranometer

description: Barro Colorado Island (BCI), Lutz catchment tower 42m & 48m<br>Location 9°9'42.36"N, 79°50'15.67"W<br>Solar Radiation, Pyranometer, interval max/min/avg<br>Lutz catchment is a 9.73ha protected watershed on BCIThe Lutz tower was built in 1972 and was originally 42m. In 2002 it was increased to 48m<br>Data from 42m and 48m can be considered to be one series since the change from 42m to 48m should not have affected the measurements<br>
DOI: 10.7303/syn25455158
title: markers.csv
DOI: 10.7303/syn25454902
title: markers.csv
DOI: 10.25573/data.10042451.v13
title: Barro Colorado Island, Clearing_Air Temperature

description: Barro Colorado Island (BCI),Clearing ('El Claro')Location: 9°9'47.21"N, 79°50'17.64"W<br>Air temperature, electronic sensor, interval max/min/avg<br>The Clearing is a small, open area surrounded by forest and some buildings. Station established in 1972. Consists of a Stevenson screen with max/min thermometers and air pressure sensor. Temperature/humidity sensor, rain gauge and evaporation sensors are located at various locations around the screen.<br>
DOI: 10.25573/data.10042463.v13
title: Barro Colorado Island, Clearing_Precipitation

description: Barro Colorado Island (BCI), Clearing ('El Claro')Location: 9°9'47.21"N, 79°50'17.64"W<br>Precipitation, electronic, Interval totals<br><br>The Clearing is a small, open area surrounded by forest and some buildings. Station established in 1972. Consists of a Stevenson screen with max/min thermometers and air pressure sensor. Temperature/humidity sensor, rain gauge and evaporation sensors are located at various locations around the screen.<br>
DOI: 10.6073/pasta/83f89193ca516458e9cc4180b5f2ea06
title: 2017 hydrologic, water quality, and soil quality data from The Jefferson Project's 8 Tributary Stations within the Lake George basin, NY, USA.

description: The Jefferson Project at Lake George – a partnership between Rensselaer Polytechnic Institute, IBM Research, and Lake George Association – combines Internet of Things technology and powerful analytics with science to create a new model for environmental monitoring and prediction. The project is building a computing platform that captures and analyzes data from a network of sensors tracking water quality and movement. These sensor data are combined with other monitoring and experimental data to create a thorough understanding of the factors that drive the lake’s food web and overall water quality. More information about The Jefferson Project is available at https://jeffersonproject.rpi.edu/ In 2017, The Jefferson Project had eight tributary monitoring stations around the lake collecting data on water quality, soil quality and hydrology. These stations are TS_Finkle, TS_Hague, TS_Indian, TS_NorthwestBay, TS_Outlet, TS_PoleHill, TS_ShelvingRock and TS_West. The stations have a sensor payload that may include some or all of the following sensors: EXO2 Multi-parameter sonde, CS451 pressure transducer, SonTek-IQ+ multi-beam acoustic flow meter with five 3.0 MHz transducers, Argonaut-SL Doppler current meter, WaterLOG® H-3123 submersible pressure transducer, and Stevens HydraProbe soil moisture sensor. The sensors collect data at high-frequency (~1 sample per minute) and the data is transferred in near real-time to off-site databases for monitoring and review by Jefferson Project researchers. Data provided is level 4 data which underwent data correction and down sampling to an hourly frequency.
DOI: 10.25573/data.10042436.v13
title: Barro Colorado Island, Clearing_Air Pressure

description: Barro Colorado Island (BCI), Clearing ('El Claro')Location: 9°9'47.21"N, 79°50'17.64"W<br>Air pressure, interval avg<br>The Clearing is a small, open area surrounded by forest and some buildings. Station established in 1972. Consists of a Stevenson screen with max/min thermometers and air pressure sensor. Temperature/humidity sensor, rain gauge and evaporation sensors are located at various locations around the screen.<br>
DOI: 10.25573/data.10042457.v13
title: Barro Colorado Island, Clearing_Relative Humidity

description: Barro Colorado Island (BCI), Clearing ('El Claro')Location: 9°9'47.21"N, 79°50'17.64"W<br>Interval avg/max/min electronic sensor Relative Humidity<br><br>The Clearing is a small, open area surrounded by forest and some buildings. Station established in 1972. Consists of a Stevenson screen with max/min thermometers and air pressure sensor. Temperature/humidity sensor, rain gauge and evaporation sensors are located at various locations around the screen.<br>
DOI: 10.6084/m9.figshare.13562285
title: Supplementary figures and files for the publication

description: The supplementary materials and figures for the following publication is hosted at this repository:<br><br><b>Profiling of open chromatin in developing pig (<i>Sus scrofa</i>) muscle to identify regulatory regions</b> <b> </b> Mazdak Salavati<sup>1,2</sup>, Shernae A. Woolley<sup>1</sup>, Yennifer Cortés Araya<sup>1</sup>, Michelle M. Halstead<sup>3</sup>, Claire Stenhouse<sup>1,4</sup>, Martin Johnsson<sup>1,5</sup>, Cheryl J. Ashworth<sup>1</sup>, Alan L. Archibald<sup>1</sup>, Francesc X. Donadeu<sup>1</sup>, Musa A. Hassan<sup>1,2<b>§</b></sup> and Emily L. Clark<sup>1,2,<b>§</b></sup> <b>Data Availability</b> The raw sequence data for the ATAC-Seq samples (n=24) are available via the European Nucleotide Archive (ENA) under accession number PRJEB41485. Details of all samples processed for the RNA-Seq dataset (n=26) can be accessed via the ENA under accession number PRJEB41488.
DOI: 10.6084/m9.figshare.13562285.v3
title: Supplementary figures and files for the publication

description: The supplementary materials and figures for the following publication is hosted at this repository:<br><br><b>Profiling of open chromatin in developing pig (<i>Sus scrofa</i>) muscle to identify regulatory regions</b> <b> </b> Mazdak Salavati<sup>1,2</sup>, Shernae A. Woolley<sup>1</sup>, Yennifer Cortés Araya<sup>1</sup>, Michelle M. Halstead<sup>3</sup>, Claire Stenhouse<sup>1,4</sup>, Martin Johnsson<sup>1,5</sup>, Cheryl J. Ashworth<sup>1</sup>, Alan L. Archibald<sup>1</sup>, Francesc X. Donadeu<sup>1</sup>, Musa A. Hassan<sup>1,2<b>§</b></sup> and Emily L. Clark<sup>1,2,<b>§</b></sup> <b>Data Availability</b> The raw sequence data for the ATAC-Seq samples (n=24) are available via the European Nucleotide Archive (ENA) under accession number PRJEB41485. Details of all samples processed for the RNA-Seq dataset (n=26) can be accessed via the ENA under accession number PRJEB41488.