cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25429189.v2
title: Quantitative analysis of super-resolution imaging data on late endosome/lysosome heterogeneity.

description: This study develops a multiplexed and quantitative DNA-PAINT super-resolution imaging pipeline to investigate the distribution of late endosomal/lysosomal (LEL) proteins across individual LELs, revealing cell-type specific LEL sub-populations with unique protein compositions, offering insights into organelle heterogeneity at single-organelle resolution.
DOI: 10.6084/m9.figshare.3529595.v1
title: Appendix A. Detailed plot and site description.

description: Detailed plot and site description.
DOI: 10.17632/tcj3dn5zrf
title: A predictive system for Henoch-Schönlein purpura nephritis established by multivariate analysis plus nomogram model in Chinese hospitalized children: A retrospective cohort study - Supplemental Figure 1

description: Supplemental Figure. 1 legend: 
Evaluation of the predictive system for HSPN based on hospitalized pediatric HSP patients. Calibration curves: the X-axis represents the nomogram-predicted probability of HSPN, and the Y-axis represents the actually observed probability. Perfect prediction would correspond to the 45-degree dotted black line. The solid red line represents the entire cohort without bias-correction, and the solid blue line is bias-corrected by bootstrapping (B=1,000 repetitions), indicating the observed nomogram performance.
DOI: 10.3535/aqm-zfw-p71
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11692515.v1
title: MOESM6 of Development of Natural Compound Molecular Fingerprint (NC-MFP) with the Dictionary of Natural Products (DNP) for natural product-based drug development

description: Additional file 6. Binary classification task II model of RapidMiner Studio 9.2 and molecular fingerprint data set to test model.
DOI: 10.6084/m9.figshare.28689128.v1
title: qinmei.gff

description: The kiwifruit (Actinidia genus) exhibits extensive polyploidy, with natural populations ranging from diploid to tetraploid, hexaploid, and even higher ploidy levels. Among these, Actinidia deliciosa (green kiwifruit) is a hexaploid species (2n=6x=174), while its close relative A. chinensis (golden kiwifruit) primarily exists as diploid (2n=2x=58) or tetraploid forms. This intricate ploidy diversity reflects a reticulate evolutionary history, likely shaped by hybridization and genome duplication events involving multiple ancestral lineages. Unraveling the origin and inheritance of the hexaploid A. deliciosa—a dominant group of kiwifruits in the global market—is critical for understanding how polyploidization has driven its evolution and for informing breeding strategies.
DOI: 10.3535/9bg-bym-yhl
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m55-0de-wws
title: Norite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11301503.v1
title: ds01

description: The dataset are analyzed the relationship between atmospheric CO<sub>2</sub> concentrations and air temperature at 500 hPa.
DOI: 10.3535/f3y-2e7-86v
title: Pegmatite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jzf-xkc-0hl
title: Basalt

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mkc-l32-9d2
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22800563.v1
title: GSE193337serut.RData

description: Single-cell RNA seqencing analysis of GSE193337 by seurat.
DOI: 10.6084/m9.figshare.23047679.v1
title: Data for " Uberizing agriculture in drylands: A few enriched, everyone endangered"

description: This data file contains information on greenhouse agriculture in the province of Almeria as well as calculations made to estimate various environmental impacts.
DOI: 10.3535/jrt-lrh-hzk
title: Granite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yct-a5s-f9g
title: Anoigmaichnus sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12251342.v9
title: Clinical features of 57 patients with lipoid congenital adrenal hyperplasia.

description: <b>A supplemental material for a clinical research paper of </b>doi.org/10.1210/clinem/dgaa557.<br>
DOI: 10.6084/m9.figshare.19955657.v1
title: Synchronous solid-state diffusion, dissolution-reprecipitation, and recrystallization leading to isotopic resetting: insights from chalcopyrite replacement by copper sulfides - raw data

description: Research Data include numerical data displayed in Figures (Microsoft Excel format) as well as the raw nanoSIMS data in a format compatible with the open source OpenMIMS plug-in (https://github.com/BWHCNI/OpenMIMS).
DOI: 10.6084/m9.figshare.21988823.v2
title: ancient schwannoma

description: This is the raw data collected of 25 cases of ancient schwanomma for a study done to provide a complete spectrum of histomorphological features of ancient schwanomma. <br> key 1: Present 0: Absent M: Male F: Female
DOI: 10.3535/yfx-yvz-y18
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28112162.v1
title: TreeMap2016_tree_table.csv

description: A TREEMAP tree table list with the CN, tm.id, trees per acre and diameter at subplot level.
DOI: 10.3535/lxc-f67-j5a
title: Porphyrite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v7z-7ej-7ht
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lbh-8ct-azg
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/whb-fya-w83
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4bc-ax0-yb9
title: Anoigmaichnus sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ffy-g93-r2k
title: †Ahtiella Öpik, 1932

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.94029.v1
title: Dataset for Measuring Spreadsheet Formula Understandability

description: Dataset going with the paper Measuring Spreadsheet Formula Understandability
DOI: 10.3535/1zy-y8j-h39
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/awf-z4y-10p
title: Granite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2r8-spl-rmf
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vlf-84s-51f
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13147324.v4
title: QMOF Database

description: This repository hosts the Quantum MOF (QMOF) database – a dataset of quantum-chemical properties for over 14,000 metal–organic framework structures.<br>Please refer to the following GitHub repository for a description of the files hosted here, supplemental scripts, and other related information:https://github.com/arosen93/QMOF.<br>If you are looking to download any of these files to a compute cluster, you can avoid transferring them from your local machine by instead: 1) right-clicking the "download" link for the file you want; 2) selecting "copy link"; 3) running `wget https://ndownloader.figshare.com/files/######` (where this is the copied link) on the computer cluster; 4) after it downloads, renaming the file with the appropriate extension and unpacking it as usual.<br>The pre-print corresponding to this work can be found at: https://doi.org/10.26434/chemrxiv.13147616.<br>This work was supported in part by the U.S. Department of Energy, Office of Basic Energy Sciences, Division of Chemical Sciences, Geosciences and Biosciences through the Nanoporous Materials Genome Center under Award Number DE-FG02-17ER16362.
DOI: 10.17632/k8tfvgftv3
title: Experiment data used in DeepHelicon

description: The data is for the paper titled "DeepHelicon: accurate prediction of inter-helical residue contacts in transmembrane protein by residual neural networks". It contains four sub-folders as follows: 1. Fasta: the protein sequences in the TRAIN, PREVIOUS, and TEST datasets, respectively. 2. PDB: the protein native structures in the TRAIN, PREVIOUS, and TEST datasets, respectively. 3. Predictions: the contact predictions on the PREVIOUS and TEST datasets, which are predicted by the contact prediction methods mentioned in the DeepHelicon paper. 4. 3D modelling: the 3D models, which are guided by the secondary structures predicted by SCRATCH1D and guided by the residue contacts predicted by DeepHelicon and DeepMetaPSICOV, respectively, are finally generated by CONFOLD2.
DOI: 10.3535/qqc-g3b-8dd
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wx4-9vf-2mv
title: †Orthoceras Bruguière, 1789

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28548074.v1
title: Computer-aided drug design for the double-membrane vesicle pore complex inhibitorsagainst SARS-CoV-2--raw data

description: This is the raw data for the article "Computer aided drug design for the double methane vessel pore complex inhibitors against SARS-CoV-2"
DOI: 10.3535/0j9-809-587
title: †Orthoceras Bruguière, 1789

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wdn-4al-sjd
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.10025519.v1
title: Predominant styles of leadership in a wood industry in Santa Catarina: a case study

description: Abstract: This article aims to identify and discuss the predominant styles of leadership in a wood industry in Santa Catarina, using primary data (survey applied with managers) and secondary (balance sheets of the company). For analysis of the primary data, was used ANACOR technique through the software LHStat®. The results of the research indicate that the transformational leadership style predominates in the managers of the company under study, sometimes the style laissez-faire is present.
DOI: 10.6084/m9.figshare.16879432.v2
title: Raw data and calculations for the paper "In vitro evaluation of cytotoxic effect of Streptococcus pyogenes strains, Protegrin PG-1, Cathelicidin LL-37, Nerve Growth Factor and chemotherapy on C6 glioma cell line" by Chernov A., Tsapieva A., Alaverdian D. et al.

description: Raw data and calculations for the paper "In vitro evaluation of cytotoxic effect of Streptococcus pyogenes strains, Protegrin PG-1, Cathelicidin LL-37, Nerve Growth Factor and chemotherapy on C6 glioma cell line" by Chernov A., Tsapieva A., Alaverdian D. et al. Results and calculations from MTT assay, Trypan blue assay, xCeLLigence real-time cytotoxicity assay
DOI: 10.6084/m9.figshare.25650306.v1
title: Understanding Individual Heat Exposure through Interdisciplinary Research on Thermoception

description: Extreme heat events are more frequent and more intense globally due to climate change. The urban environment is an additional factor enhancing the effects of heat. Older adults are especially at risk due to their physiology and socio-economic situation. Yet, there is limited knowledge about their experiences of summer heat, their actual heat exposure and how they negotiate their thermal comfort through different adaptation practices. In conventional research about heat exposure and thermal comfort, very little attention is paid to individual behaviour and subjective experiences. To understand how older adults feel the heat we study their thermoception, which we conceptualize as an embodied subjective experience of temperature shaped by the changing interaction between environmental conditions and people’s bodies. This dataset stems from interdisciplinary research conducted in Warsaw and Madrid in the summer of 2022. We combined ethnographic research with gathering physical temperature data to show how thermoception is mediated by the interaction of older adults’ bodies with their environment through a range of adaptation practices.This dataset provides physical temperature data gathered during the study. Sensors supplemented the ethnographic study. In 2022, we recorded (every 10 minutes) the air temperature and relative humidity in participants’ homes using Kestrel D2 sensors (Warsaw: 10 May – 29 Aug; Madrid: 30 May – 29 Aug). The sensor data are tagged with indoor or outdoor. Indoor data represent the sensor data collected by the sensors installed indoors (in participants’ apartments). The outdoor sensor data are from the sensors that were given to the participants to carry with themselves when they are going outside.Further details along with the results of the study can be found in a journal paper with the same title published in Nature Humanities and Social Sciences Communications.
DOI: 10.3535/chx-a78-mqn
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m7k-39a-w7k
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27297864.v1
title: Navigating Black Swans in Global Supply Chain Through the Lens of Complexity Science

description: Hypothesis: The frequency and magnitude of disruptions exhibit a power law indicating the global supply network evolves into a state of Self-Organised Criticality
DOI: 10.3535/sa8-z5e-x25
title: Garnet-mica schist

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/whr-yh2-5ng
title: Ilmenorutile

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20173583.v1
title: Contaminant Proteins

description: FASTA file of all contaminant proteins used to build databases in this study.
DOI: 10.17632/bfkd4x9wkf
title: Data for: Molecular Engineering of Highly Efficient Dopant-Free Spiro-Type Hole Transporting Materials for Perovskite Solar Cells

description: Some research data for this artical
DOI: 10.3535/b1a-4wk-m99
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/exp-505-j7a
title: †Ahtiella Öpik, 1932

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/f25-n8t-vrr
title: †Ahtiella Öpik, 1932

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gp5-cmr-wd6
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20176412.v1
title: Taylor and Francis Dimensions Analysis for Impact Assessment Author Survey

description: Dimensions analysis for Taylor & Francis Impact Assessment Author Survey
DOI: 10.3535/dqg-01v-nry
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tm7-x1p-j12
title: †Orthoceras Bruguière, 1789

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/bm3-2rh-gf6
title: Shale

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/h8v-ace-1j0
title: Tetrahedrite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.10298042.v1
title: Primers of all genes in Bacillus subtilis strain 168 without recognition sequence of NdeI and BamHI

description: Primer design is a critical part of the molecular cloning workflow for amplifying target genes from a template. Serving as a molecular marker for the region in which polymerase chain reaction should amplify a particular gene segment, primers should have perfect complementary base pairing with the target strand of the DNA duplex in which the gene resides. Beyond the binding sequence that anneals a primer to the target DNA strand at the correct location, recognition and flanking sequences are also typically appended to primer sequence to aid downstream restriction enzyme digestion for molecular cloning purposes. Specifically, recognition sequence appended to the primer facilitates recognition by specific restriction enzyme for digestion and excision of the gene fragment that is subsequently inserted into an expression vector. However, one critical requirement for the choice of restriction enzyme is that the gene of interest should not contain recognition sequence of the restriction enzyme. In this contribution, a primer database for all genes in <i>Bacillus subtilis</i> strain 168 (Genbank ID number: NC_000964.3) that do not contain recognition sequence of restriction enzymes, NdeI and BamHI was obtained using an in-house MATLAB software processing the annotated genome sequence of <i>B. subtilis</i> strain 168 from Genbank. The database comprises the gene identities together with the forward and reverse primers necessary for amplifying and inserting the gene of interest into an expression vector. NdeI recognition sequence was appended to the forward primer, while that of BamHI was appended to the reverse primer. Melting temperature of the primer was designed to be 55 <sup>o</sup>C. Two nucleotide flanking sequence of ‘AT’ was appended to the start of the forward and reverse primers to help anchor the RNA polymerase during transcription. Altogether, the database comprises 3202 genes that are without recognition sequence of NdeI and BamHI. Collectively, a primer database comprising genes in <i>B. subtilis</i> strain 168 that are without recognition sequence of NdeI and BamHI restriction enzymes was created using a MATLAB algorithm. Both forward and reverse primers sequence are available in the database and should find use in workflows attempting to clone specific genes from the <i>B. subtilis</i> strain 168 genome using NdeI and BamHI for the forward and reverse primers respectively.<br><br>
DOI: 10.3535/6g5-c2c-rw9
title: Quartzite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yjg-h5g-tt6
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fxa-qwm-jg4
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z8h-e48-zjj
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gpd-txj-raz
title: Chalcedony

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7d0-dvw-qhs
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/bag-4xw-kfb
title: Biotite gneiss

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5114125.v1
title: Sorbus aucuparia chorology

description: Distribution map of rowan (<i>Sorbus aucuparia</i>)<br><br>These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geodatabases and scientific literature.<br>The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix “plg”), which define continuous areas of occupancy of the species, and with point features (name suffix “pnt”), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix “syn”).<br>All polygon borders delimiting the range are generalized across the mainland and sea boundaries, and not clipped to a specific coastline. This offers the possibility to mask sea areas, or to clip and extract the terrestrial range parts using GIS data layers of the users’ choice. <br><br>Please cite as:<br>Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007 <br><br>Additional information and used references are on 'supplementary materials' document:<br>https://doi.org/10.6084/m9.figshare.5091901<br><br>Chorological maps are part of the "European Atlas of Forest Tree Species" project:<br>https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.3535/1nd-s6b-bz1
title: Biotite gneiss

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7qq-m35-p0l
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.