cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.pz5mj4
title: Occurrence Download

description: A dataset containing 5723 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tamandua mexicana (Saussure, 1860)"
 ]
}

 The dataset includes 5723 records from 211 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076821-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5hh6ch97
title: MassIVE MSV000095669 - Antibiotics that Kill Gram-negative Bacteria by Restructuring the Outer Membrane Protein BamA
title: Gram-negative pathogens are the highest priority, and new antibiotics are urgently needed. The essential outer membrane protein, BamA, has emerged as a target for killing gram-negative bacteria selectively. The binding of antibiotics to the lateral gate of BamA prevents the folding of outer membrane proteins and leads to cell death. The lateral gate's target space is currently unknown and an attractive target for antibiotic discovery. Using a combination of bioinformatic prediction and synthetic biology, we targeted and produced a family of natural products, the xenorceptides. Most xenorceptides were produced by heterologous expression in E. coli and xenorceptide A2 was identified to kill Enterobacteriaceae selectively. Mode of action studies using nuclear magnetic resonance and cryo-EM show that xenorceptide A2 binds to BamA by inserting itself as a new beta-strand between beta1 and beta16 at the lateral gate of BamA. This binding leads to a conformation of BamA, which has not been observed before. Biological evaluation of xenorceptide A2 shows promising activity in vitro and in vivo, and limited resistance which differentiates it from other antibiotics of this class. Xenorceptides are the third class of cyclophane RiPP antibiotics, which we collectively term bamabactins. These studies highlight the importance of phylogenetic genome mining and synthetic biology to tease out important natural products that represent next-generation antibiotics with unique modes of action.
DOI: 10.6084/m9.figshare.26796038
title: Implementation of algorithm 1 in Julia from Asymptotic limits of transient patterns in a continuous-space interacting particle system.

description: Recursive computation of partial derivatives using tree data structure.
DOI: 10.6084/m9.figshare.26796038.v1
title: Implementation of algorithm 1 in Julia from Asymptotic limits of transient patterns in a continuous-space interacting particle system.

description: Recursive computation of partial derivatives using tree data structure.
DOI: 10.5281/zenodo.13353040
title: ENDGAME - Laboratory Experiment 2024-01-16 Exp. 001 - High Speed Camera data

description: Shock-tube experiments in combination with high speed Schlieren shadow photography. 

The shocktube setup consists of a high-pressure reservoir connected with a cylindrical tube through a diaphragm pulse valve which allows a fast release of pressurized gas into the ambient pressure tube. The high-pressure reservoir is filled with compressed air at a given overpressure with respect to ambient pressure (up to 8 bar). The pipe was either empty (i.e. with air at ambient conditions) or filled with a given amount of small particles. We adopted pipes an inner diameter of 4 cm and different lengths (20, 30 and 80 cm). We also considered different volumes of pressurized gas (~650 cm3 and ~1550 cm3). A pressure sensor has been placed at the vent of the conduit to record pressure variations during experiments. Images from the high speed camera were collected at a frame rate of 30000 fps.

When the valve is open, a jet flow is produced, with shock and acoustic waves propagating in the atmosphere, which become visible due to the high speed Schlieren shadow photography.
DOI: 10.5281/zenodo.13353041
title: ENDGAME - Laboratory Experiment 2024-01-16 Exp. 001 - High Speed Camera data

description: Shock-tube experiments in combination with high speed Schlieren shadow photography. 

The shocktube setup consists of a high-pressure reservoir connected with a cylindrical tube through a diaphragm pulse valve which allows a fast release of pressurized gas into the ambient pressure tube. The high-pressure reservoir is filled with compressed air at a given overpressure with respect to ambient pressure (up to 8 bar). The pipe was either empty (i.e. with air at ambient conditions) or filled with a given amount of small particles. We adopted pipes an inner diameter of 4 cm and different lengths (20, 30 and 80 cm). We also considered different volumes of pressurized gas (~650 cm3 and ~1550 cm3). A pressure sensor has been placed at the vent of the conduit to record pressure variations during experiments. Images from the high speed camera were collected at a frame rate of 30000 fps.

When the valve is open, a jet flow is produced, with shock and acoustic waves propagating in the atmosphere, which become visible due to the high speed Schlieren shadow photography.
DOI: 10.6084/m9.figshare.26136237
title: Collaborative assessment as an intervention in the treatment of mental Illness: a systematic review

description: Three meta-analyses suggested that the psychological assessment as a therapeutic intervention approach might have therapeutic effects but had unspecific inclusion criteria. We searched four databases for RCTs that reported on the use of psychological assessment as an intervention. Two reviewers independently selected papers, extracted data, and assessed study quality. We conducted and reported the systematic review following the PRISMA statement. We assessed the Risk of bias in included studies using the Risk of Bias tool and graded the strength of the evidence with GRADE. We included two RCTs: The first study investigated Therapeutic Assessment (TA) combined with Manual-Assisted Cognitive Behavior Therapy (MACT) compared with MACT only in 16 outpatients with personality disorders. The trial found among completers (<i>n</i> = 7) no difference in borderline symptomatology but a possible difference regarding suicidality favoring MACT + TA. The trial did not provide any outcomes relating to readiness for treatment. The other trial investigated TA compared with a Goal-focused Pretreatment Intervention in a sample of 74 outpatients with personality disorders. The results found no intervention effects on symptomatology but suggested that TA might improve patient expectancy for future treatment among completers of the intervention. Both trials were judged at a high risk of bias and with very low certainty of evidence. We found no support for the clinical effect of psychological assessment as a therapeutic intervention due to the high risk of bias and low certainty of the evidence.
DOI: 10.6084/m9.figshare.26136237.v1
title: Collaborative assessment as an intervention in the treatment of mental Illness: a systematic review

description: Three meta-analyses suggested that the psychological assessment as a therapeutic intervention approach might have therapeutic effects but had unspecific inclusion criteria. We searched four databases for RCTs that reported on the use of psychological assessment as an intervention. Two reviewers independently selected papers, extracted data, and assessed study quality. We conducted and reported the systematic review following the PRISMA statement. We assessed the Risk of bias in included studies using the Risk of Bias tool and graded the strength of the evidence with GRADE. We included two RCTs: The first study investigated Therapeutic Assessment (TA) combined with Manual-Assisted Cognitive Behavior Therapy (MACT) compared with MACT only in 16 outpatients with personality disorders. The trial found among completers (<i>n</i> = 7) no difference in borderline symptomatology but a possible difference regarding suicidality favoring MACT + TA. The trial did not provide any outcomes relating to readiness for treatment. The other trial investigated TA compared with a Goal-focused Pretreatment Intervention in a sample of 74 outpatients with personality disorders. The results found no intervention effects on symptomatology but suggested that TA might improve patient expectancy for future treatment among completers of the intervention. Both trials were judged at a high risk of bias and with very low certainty of evidence. We found no support for the clinical effect of psychological assessment as a therapeutic intervention due to the high risk of bias and low certainty of the evidence.
DOI: 10.15468/dl.6tz7wb
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudacanthus zuninoi Reyes-Castillo & Chamé-Vázquez, 2014"
 ]
}

 The dataset includes 11 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076823-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9stjfh
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudacanthus zuninoi Reyes-Castillo & Chamé-Vázquez, 2014"
 ]
}

 The dataset includes 11 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076824-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kfq2gn
title: Occurrence Download

description: A dataset containing 359 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Achnatherum inebrians (Hance) Keng"
 ]
}

 The dataset includes 359 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076825-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26356540
title: Nuna supercontinent assembly linked to carbon cycling in shear zones 1.9-1.7 billion years ago

description: Data files include: (1) sample locations/descriptions, (2) Re-Os data, (3) U-Pb data, and (4) C isotope data
DOI: 10.6084/m9.figshare.26356540.v1
title: Nuna supercontinent assembly linked to carbon cycling in shear zones 1.9-1.7 billion years ago

description: Data files include: (1) sample locations/descriptions, (2) Re-Os data, (3) U-Pb data, and (4) C isotope data
DOI: 10.6084/m9.figshare.26103436
title: Assessment of the errors of high-fidelity two-qubit gates in silicon quantum dots

description: Raw data in the figures. .csv format
DOI: 10.6084/m9.figshare.26103436.v1
title: Assessment of the errors of high-fidelity two-qubit gates in silicon quantum dots

description: Raw data in the figures. .csv format
DOI: 10.6084/m9.figshare.26387656
title: Toripalimab plus chemotherapy and radiotherapy for treatment-naive advanced esophageal squamous cell carcinoma: A single-arm phase 2 trial

description: 1. source data: The source data includes de-identified raw data from this clinical study, covering patients' baseline information, disease progression or death status, and tumor response. It also includes data from translational research, such as cytokine data and multiplex immunofluorescence staining data.
2. Supplemental Data 1: List of antibody clones utilized for flow cytometry are included in Supplementary Data 1.
DOI: 10.6084/m9.figshare.26387656.v1
title: Toripalimab plus chemotherapy and radiotherapy for treatment-naive advanced esophageal squamous cell carcinoma: A single-arm phase 2 trial

description: 1. source data: The source data includes de-identified raw data from this clinical study, covering patients' baseline information, disease progression or death status, and tumor response. It also includes data from translational research, such as cytokine data and multiplex immunofluorescence staining data.
2. Supplemental Data 1: List of antibody clones utilized for flow cytometry are included in Supplementary Data 1.
DOI: 10.5281/zenodo.13353099
title: ENDGAME - Laboratory Experiment 2024-01-16 Exp. 002 - High Speed Camera data

description: Shock-tube experiments in combination with high speed Schlieren shadow photography. 

The shocktube setup consists of a high-pressure reservoir connected with a cylindrical tube through a diaphragm pulse valve which allows a fast release of pressurized gas into the ambient pressure tube. The high-pressure reservoir is filled with compressed air at a given overpressure with respect to ambient pressure (up to 8 bar). The pipe was either empty (i.e. with air at ambient conditions) or filled with a given amount of small particles. We adopted pipes an inner diameter of 4 cm and different lengths (20, 30 and 80 cm). We also considered different volumes of pressurized gas (~650 cm3 and ~1550 cm3). A pressure sensor has been placed at the vent of the conduit to record pressure variations during experiments. Images from the high speed camera were collected at a frame rate of 30000 fps.

When the valve is open, a jet flow is produced, with shock and acoustic waves propagating in the atmosphere, which become visible due to the high speed Schlieren shadow photography.
DOI: 10.5281/zenodo.13353100
title: ENDGAME - Laboratory Experiment 2024-01-16 Exp. 002 - High Speed Camera data

description: Shock-tube experiments in combination with high speed Schlieren shadow photography. 

The shocktube setup consists of a high-pressure reservoir connected with a cylindrical tube through a diaphragm pulse valve which allows a fast release of pressurized gas into the ambient pressure tube. The high-pressure reservoir is filled with compressed air at a given overpressure with respect to ambient pressure (up to 8 bar). The pipe was either empty (i.e. with air at ambient conditions) or filled with a given amount of small particles. We adopted pipes an inner diameter of 4 cm and different lengths (20, 30 and 80 cm). We also considered different volumes of pressurized gas (~650 cm3 and ~1550 cm3). A pressure sensor has been placed at the vent of the conduit to record pressure variations during experiments. Images from the high speed camera were collected at a frame rate of 30000 fps.

When the valve is open, a jet flow is produced, with shock and acoustic waves propagating in the atmosphere, which become visible due to the high speed Schlieren shadow photography.
DOI: 10.5281/zenodo.8297026
title: Adverse Outcome Pathway Wiki RDF

description: This dataset is the RDF generated from the AOP-Wiki data release (aopwiki.org/downloads). It was generated using a Jupyter notebook that is available on GitHub (github.com/marvinm2/AOPWikiRDF), and the process and additional description of the RDF have been published (doi.org/10.1089/aivt.2021.0010).
description: Funded by the European Union's Horizon 2020 (EU 2020) research and innovation program under grant agreement no. 681002 (EU-ToxRisk), grant agreement no. 814572 (NanoSolveIT), grant agreement no. 814425 (RiskGONE), EINFRA-22-2016 program under grant agreement no. 731075 (OpenRiskNet), and VHP4Safety, which is funded by the Netherlands Research Council (NWO) 'Netherlands Research Agenda: Research on Routes by Consortia' (NWA-ORC 1292.19.272)
description: {"references": ["10.1089/aivt.2021.0010"]}
DOI: 10.5281/zenodo.***
title: Adverse Outcome Pathway Wiki RDF

description: This dataset is the RDF generated from the AOP-Wiki data release (aopwiki.org/downloads). It was generated using a Jupyter notebook that is available on GitHub (github.com/marvinm2/AOPWikiRDF), and the process and additional description of the RDF have been published (doi.org/10.1089/aivt.2021.0010).
description: Funded by the European Union's Horizon 2020 (EU 2020) research and innovation program under grant agreement no. 681002 (EU-ToxRisk), grant agreement no. 814572 (NanoSolveIT), grant agreement no. 814425 (RiskGONE), EINFRA-22-2016 program under grant agreement no. 731075 (OpenRiskNet), and VHP4Safety, which is funded by the Netherlands Research Council (NWO) 'Netherlands Research Agenda: Research on Routes by Consortia' (NWA-ORC 1292.19.272)
DOI: 10.5281/zenodo.10057880
title: Adverse Outcome Pathway Wiki RDF

description: This dataset is the RDF generated from the AOP-Wiki data release (aopwiki.org/downloads). It was generated using a Jupyter notebook that is available on GitHub (github.com/marvinm2/AOPWikiRDF), and the process and additional description of the RDF have been published (doi.org/10.1089/aivt.2021.0010). 
description: Funded by the European Union's Horizon 2020 (EU 2020) research and innovation program under grant agreement no. 681002 (EU-ToxRisk),   grant agreement no. 814572 (NanoSolveIT),  grant agreement no. 814425 (RiskGONE),  EINFRA-22-2016 program under grant agreement no. 731075 (OpenRiskNet), and VHP4Safety, which is funded by the Netherlands Research Council (NWO) 'Netherlands Research Agenda: Research on Routes by Consortia' (NWA-ORC 1292.19.272)
DOI: 10.5281/zenodo.8297025
title: Adverse Outcome Pathway Wiki RDF

description: This dataset is the RDF generated from the AOP-Wiki data release (aopwiki.org/downloads). It was generated using a Jupyter notebook that is available on GitHub (github.com/marvinm2/AOPWikiRDF), and the process and additional description of the RDF have been published (doi.org/10.1089/aivt.2021.0010).
description: Funded by the European Union's Horizon 2020 (EU 2020) research and innovation program under grant agreement no. 681002 (EU-ToxRisk), grant agreement no. 814572 (NanoSolveIT), grant agreement no. 814425 (RiskGONE), EINFRA-22-2016 program under grant agreement no. 731075 (OpenRiskNet), and VHP4Safety, which is funded by the Netherlands Research Council (NWO) 'Netherlands Research Agenda: Research on Routes by Consortia' (NWA-ORC 1292.19.272)
DOI: 10.6084/m9.figshare.25412929
title: Dynamics of directional motor tuning in the primate premotor and primary motor cortices during sensorimotor learning

description: Data for all figures in Ebina et al. that was submitted to Nature Communications.
DOI: 10.6084/m9.figshare.25412929.v1
title: Dynamics of directional motor tuning in the primate premotor and primary motor cortices during sensorimotor learning

description: Data for all figures in Ebina et al. that was submitted to Nature Communications.
DOI: 10.6084/m9.figshare.26170447
title: Interference haptic stimulation and consistent quantitative tactility in transparent electrotactile screen with pressure-sensitive transistors

description: Organized the raw data corresponding to all the figures in the manuscript and supplementary materials into an excel file.
DOI: 10.6084/m9.figshare.26170447.v1
title: Interference haptic stimulation and consistent quantitative tactility in transparent electrotactile screen with pressure-sensitive transistors

description: Organized the raw data corresponding to all the figures in the manuscript and supplementary materials into an excel file.
DOI: 10.15468/dl.3ggsud
title: Occurrence Download

description: A dataset containing 81720 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Antarctica",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Fungi"
 ]
}

 The dataset includes 81720 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076826-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ph22w7
title: Occurrence Download

description: A dataset containing 9984 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "OccurrenceStatus is Present",
 "TaxonKey is Pinus sylvestris L.",
 "Year 1000-2024"
 ]
}

 The dataset includes 9984 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076828-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48548/pubdata-1709
title: Tourists' valuation of nature in protected areas: A systematic review_dataset

description: The dataset entails 152 articles identified as relevant through a systematic literature search. It contains information about their meta-information, biogeographical data, valuation (methodological approach), value types and objects.
description: Analysis of text documents
DOI: 10.15468/dl.2vbptz
title: Occurrence Download

description: A dataset containing 2091 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salix myrtilloides L.",
 "HasCoordinate is true",
 "Continent is Europe",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 2091 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005688-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rug2g3
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geodia hentscheli Cárdenas, Rapp, Schander & Tendal, 2010"
 ]
}

 The dataset includes 88 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0117497-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.szcl9w
title: Occurrence Download

description: A dataset containing 21451 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Uranotaenia Lynch Arribálzaga, 1891"
 ]
}

 The dataset includes 21451 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010900-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m4nhcp
title: Occurrence Download

description: A dataset containing 7801 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Crotalus Linnaeus, 1758",
 "Year 2000-2024"
 ]
}

 The dataset includes 7801 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041721-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2jwm3p
title: Occurrence Download

description: A dataset containing 107 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astragalus brachystachys DC."
 ]
}

 The dataset includes 107 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019690-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z5u469
title: Occurrence Download

description: A dataset containing 1934 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tethya aurantium (Pallas, 1766)"
 ]
}

 The dataset includes 1934 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0117482-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nvty4l
title: Occurrence Download

description: A dataset containing 343620 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Picea abies (L.) H.Karst."
 ]
}

 The dataset includes 343620 records from 685 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011102-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.