cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7929/issda/76macd
title: The Intellectual Disability Supplement to the Irish Longitudinal Study on Ageing (IDS-TILDA) Wave 3, 2016-2017

description: The Intellectual Disability Supplement to the Irish Longitudinal Study on Ageing (IDS-TILDA) is a longitudinal study researching ageing in Ireland among people with an intellectual disability aged 40 and over. This study is the first of its kind in Europe, and the only study able to directly compare the ageing of people with an intellectual disability with the general ageing population. The underpinning values of IDS-TILDA are inclusion, choice, empowerment, person centred, the promotion of people with intellectual disability, the promotion of best practice and to contribute to the lives of people with intellectual disability. The objectives of IDS-TILDA are: to understand the health characteristics of people ageing with an intellectual disability; to examine the service needs and health service utilization of people ageing with an intellectual disability; to identify disparities in the health status of adults with an intellectual disability as compared to The Irish Longitudinal Study on Ageing’s (TILDA) findings for the general population; and to support evidence-informed policies, practices and evaluation. IDS-TILDA Wave 3 provides much needed data on the health, social, economic and environmental circumstances of 609 people as they grow older and how their circumstances change over a period of time.
DOI: 10.18728/igb-fred-1047.2
title: Dataset - A novel in situ experimental setup for studying the impact of bedform celerity on 2D oxygen distribution in the hyporheic zone of small streams

description: Data used for supporting the research article "A novel in situ experimental setup for studying the impact of bedform celerity on 2D oxygen distribution in the hyporheic zone of small streams" submitted to Water Resources Research.
The dataset contains:
1) Data with field notes with measurements of stream velocity, ...
2) Compilation of laser profiles data for each stream velocity
3) Morphodynamic results for each of the stream velocity: Bedform celerity, height, and length, flux calculations
4) Digital raw images of NIR camera and Optode
5) Processed image data
6) Continues measurements with the FTC at each depth profile for each velocity
Data file that have no spedified file type, e.g. planar optode processed images, can be read using Python's pickle.load() function.
DOI: 10.15468/dl.u77j2u
title: Occurrence Download

description: A dataset containing 1740298 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.countrycode = 'FR'
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 1740298 records were derived from 25353 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081329-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pryjvg
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aethionema semnanensis Mozaff."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033737-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.abvqfx
title: Occurrence Download

description: A dataset containing 941 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ylistrum balloti (Bernardi, 1861)"
 ]
}

 The dataset includes 941 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0123210-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.48n2h8
title: Occurrence Download

description: A dataset containing 257 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pseudois nayaur (Hodgson, 1833)"
 ]
}

 The dataset includes 257 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002926-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tm5765
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aethionema karamanicum Ertugrul & Beyazoglu"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033710-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ghcgv6
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-25.64633 -12.93503,41.64633 -12.93503,41.64633 13.93503,-25.64633 13.93503,-25.64633 -12.93503))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ancistrochilus Rolfe"
 ]
}

 The dataset includes 87 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0162519-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3g8h63
title: Occurrence Download

description: A dataset containing 149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Asterina fimbriata Perrier, 1875"
 ]
}

 The dataset includes 149 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002947-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wuz8n7
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aethionema lycium I.A.Andersson, Carlström, Franzén, Karlén & Nyborn"
 ]
}

 The dataset includes 5 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033716-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.txyz3z
title: Occurrence Download

description: A dataset containing 645 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Varanus bengalensis (Daudin, 1802)"
 ]
}

 The dataset includes 645 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0162517-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b3p53j
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-86.47470 10.09441,65.47470 10.09441,65.47470 70.90559,-86.47470 70.90559,-86.47470 10.09441))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Oxynotus paradoxus Frade, 1929"
 ]
}

 The dataset includes 33 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002927-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x7c55r
title: Occurrence Download

description: A dataset containing 2339 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Semiaquilegia adoxoides (DC.) Makino"
 ]
}

 The dataset includes 2339 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0237129-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k7fxbp
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Telenomus remus Nixon, 1937"
 ]
}

 The dataset includes 154 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005675-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kpvr4u
title: Occurrence Download

description: A dataset containing 15200044 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 15200044 records from 2524 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002920-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112029141
title: Cuneiform Tablet 1913.14.1516, Spurlock 1913.14.1516

description: [Text Description:] Receipt for oil and sesame oil ❧ [Text or Publication Number Note:] Spurlock 1913.14.1516; CDLI P421368 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Pale Orange Yellow (10YR 8.5/2.5) ❧ [Physical Object Note:] 2.9 x 2.1 x 1.3 cm (8 g)
DOI: 10.15468/dl.jwt82p
title: Occurrence Download

description: A dataset containing 5327899 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Peru"
 ]
}

 The dataset includes 5327899 records from 1684 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034758-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yy3bv7
title: Occurrence Download

description: A dataset containing 769498 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Juncus effusus L."
 ]
}

 The dataset includes 769498 records from 1031 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0214086-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fprhjw
title: Occurrence Download

description: A dataset containing 1732 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is United States of America",
 "Country is Canada"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Helicopsyche borealis (Hagen, 1861)"
 ]
}

 The dataset includes 1732 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0238824-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vrpqqh
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "Locality" : [
 "is Parque Nacional Serra de Itabaiana - Trilha Cafuz, Mata Atlântica"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009224-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6uokps
title: Occurrence Download

description: A dataset containing 25033 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Dianthus armeria L."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 25033 records from 201 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012650-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.de8vq9
title: Occurrence Download

description: A dataset containing 5109 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leopardus pardalis (Linnaeus, 1758)"
 ]
}

 The dataset includes 5109 records from 212 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0214108-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.quqc7u
title: Occurrence Download

description: A dataset containing 96 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sander volgensis (Gmelin, 1789)"
 ]
}

 The dataset includes 96 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0324464-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ph99jx
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "Locality" : [
 "is Parque Nacional Serra de Itabaiana ( PNSI)"
 ]
}

 The dataset includes 55 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009207-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.levonu
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Herpetology",
 "TaxonKey is Contomastix lacertoides (Duméril & Bibron, 1839)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012650-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eb8wa2
title: Occurrence Download

description: A dataset containing 21591 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Blysmus compressus (L.) Panz. ex Link"
 ]
}

 The dataset includes 21591 records from 245 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0225271-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10445699
title: Scripts, figures and output for "Oxygen intrusions sustain aerobic nitrite oxidation in anoxic marine zones"

description: Scripts for producing the visualisations, analysis and model results presented in the paper.

Chemostat_model.tar.gz holds the python code required for running the chemostat modelChemostat_output.tar.gz holds the output of our experiments

Contact pearse.buchanan@csiro.au or ezakem@carnegiescience.edu for any questions
DOI: 10.5281/zenodo.15139307
title: Scripts, figures and output for "Oxygen intrusions sustain aerobic nitrite oxidation in anoxic marine zones" by Pearse J. Buchanan & colleagues.

description: Scripts for producing the visualisations, analysis and model results presented in the paper entitled "Oxygen intrusions sustain aerobic nitrite-oxidizing bacteria in anoxic marine zones" by Pearse James Buchanan & colleagues. 

Figures.tar holds the figures made with the python scripts Chemostat_model.tar holds the python code required for running the chemostat modelChemostat_output.tar holds the output of our experimentsOxicMAGS.txt and mumax_MAGS_gRodon.txt are required data files for fig5.py

Other python scripts and figures seen in the full paper are held at https://doi.org/10.5281/zenodo.15139207 and were completed using jupyter notebooks on a memory intensive instance on the Expanse Super computer in San Diego. Please see those files for the remaining analysis.

Contact pearse.buchanan@csiro.au or ezakem@carnegiescience.edu for any questions
DOI: 10.5281/zenodo.7653736
title: Scripts, figures and output for "Oxygen intrusions sustain aerobic nitrite oxidation in anoxic marine zones" by Pearse J. Buchanan & colleagues.

description: Scripts for producing the visualisations, analysis and model results presented in the paper entitled "Oxygen intrusions sustain aerobic nitrite-oxidizing bacteria in anoxic marine zones" by Pearse James Buchanan & colleagues. 

Figures.tar holds the figures made with the python scripts Chemostat_model.tar holds the python code required for running the chemostat modelChemostat_output.tar holds the output of our experimentsOxicMAGS.txt and mumax_MAGS_gRodon.txt are required data files for fig5.py

Other python scripts and figures seen in the full paper are held at https://doi.org/10.5281/zenodo.15139207 and were completed using jupyter notebooks on a memory intensive instance on the Expanse Super computer in San Diego. Please see those files for the remaining analysis.

Contact pearse.buchanan@csiro.au or ezakem@carnegiescience.edu for any questions
DOI: 10.5281/zenodo.7653737
title: Scripts, figures and output for "Oxygen intrusions sustain aerobic nitrite oxidation in anoxic marine zones"

description: Scripts for producing the visualisations, analysis and model results presented in the paper. Chemostat_model.tar.gz holds the python code required for running the chemostat model<br> Chemostat_output.tar.gz holds the output of our experiments<br> bgcmodel_output.tar.gz holds the output of the 1D ocean-biogeochemical model Contact pearse.buchanan@hotmail.com or ezakem@carnegiescience.edu for any questions<br>
DOI: 10.15468/dl.rwnxxn
title: Occurrence Download

description: A dataset containing 210499 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Mantodea)",
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence, Material citation, Living Specimen)",
 "CoordinateUncertaintyInMeters is less than or equal to 10000",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 210499 records from 1298 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006814-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive162112.20241212.9.2
title: <i>Gluconacetobacter</i> <i>tumulicola</i> Tazato <i>et al.</i> 2012

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162112.20251217.10
title: <i>Gluconacetobacter</i> <i>tumulicola</i> Tazato <i>et al.</i> 2012

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162113.20241212.9.2
title: <i>Maricurvus</i> <i>nonylphenolicus</i> Iwaki <i>et al.</i> 2012

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162113.20251217.10
title: <i>Maricurvus</i> <i>nonylphenolicus</i> Iwaki <i>et al.</i> 2012

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162114.20241212.9.2
title: <i>Maribacter</i> sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162114.20251217.10
title: <i>Maribacter</i> sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162115.20250331.9.3
title: <i>Streptomyces</i> sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162115.20251217.10
title: <i>Streptomyces</i> sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162116.20241212.9.2
title: <i>Halobaculum</i> <i>magnesiiphilum</i> Shimoshige <i>et al.</i> 2013

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162116.20251217.10
title: <i>Halobaculum</i> <i>magnesiiphilum</i> Shimoshige <i>et al.</i> 2013

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162117.20241212.9.2
title: <i>Halorubrum</i> <i>gandharaense</i> Kondo <i>et al.</i> 2015

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162117.20251217.10
title: <i>Halorubrum</i> <i>gandharaense</i> Kondo <i>et al.</i> 2015

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162118.20241212.9.2
title: <i>Legionella</i> <i>rubrilucens</i> Brenner <i>et al.</i> 1985

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162118.20251217.10
title: <i>Legionella</i> <i>rubrilucens</i> Brenner <i>et al.</i> 1985

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive162119.20250331.9.3
title: <i>Iodidimonas</i> <i>gelatinilytica</i> Iino <i>et al.</i>

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.