cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9750887.v1
title: Dataset for: Everything you wanted to know about phase and reference frequency in one- and two-dimensional NMR Spectroscopy

description: The fundamental concept of phase is discussed in this tutorial aimed at providing students with an explanation of the delays and processing parameters they may find in NMR pulse programs. We consider the phase of radio-frequency pulses, receiver, magnetization and how all these parameters are related to phases and offsets of signals in spectra. The impact of the off-resonance effect on the phase of the magnetization is discussed before presenting an overview of how adjustment of the time reference of the free induction decay (FID) avoids first-order correction of the phase of spectra. The main objective of this tutorial is to show how the relative phase of a pulse and the receiver can be used to change the reference frequency along direct and indirect dimensions of NMR experiments. Unusual applications of phase incrementation with non-90 degree angles will be illustrated on 1D and 2D NMR spectra.
DOI: 10.3535/qdn-y7j-hcy
title: †Skenidioides Schuchert & Cooper, 1931

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.8259401.v1
title: Urbanisation of housing and eco-efficient management of construction waste in Chile: application of the Spanish model

description: Abstract This paper summarises a pioneering experience in construction and demolition waste management (C&DW) in Chile. The case study consists of the construction of 17 detached dwellings that are part of an urbanisation project in the city of Temuco, in the Araucana region. The methodology developed in Spain for the C&DW quantification is employed for the calculation of expected waste in construction projects. The implementation of the proposed methodology, which includes waste separation activities on the construction site, can halve management costs, as well as the environmental cost of construction works. The case study shows the feasibility and adaptation of the Spanish methodology to an urbanisation project in Chile. Furthermore, its application generates triple benefits: environmental, social and economic. At the same time, the new proposal to reuse, recycle, treat or eliminate the waste produced sets new challenges in the areas of legislation and government management, which are elements to be considered if Chile is to achieve C&DW managemant standards similar to those in place in Brazil and the European Union.
DOI: 10.3535/7gf-dp6-0x6
title: Haplacanthus marginalis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mga-deq-lmf
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2e3-q7b-1wh
title: Dartmuthia gemmifera

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/93e-tld-pxc
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.7274/27949077.v1
title: Frequency Combs in Injected Terahertz Ring Quantum Cascade Lasers

description: Optical frequency combs are laser sources characterized by a series of discrete, equally spaced lines in the frequency domain. Integrated, chip-scale frequency combs have a wide range of applications, including communications, frequency synthesis, optical ranging, and gas spectroscopy. In the terahertz (THz) and mid-infrared (MIR) regions, quantum cascade lasers (QCLs) have emerged as the leading compact sources for generating these frequency combs. Of particular interest are ring QCLs, which have shown promise in generating dissipative Kerr solitons (DKS) — ultra-short pulses that can travel through dispersive, nonlinear media while preserving their shape and amplitude. These pulsed sources in the THz range are valuable for applications such as nonlinear spectroscopy, which requires high optical intensities, and ranging applications, which benefit from short pulse durations.

In this work, we demonstrate frequency comb formation in ring terahertz QCLs through the injection of light from a distributed feedback (DFB) laser. The DFB laser’s design frequency is selected to match the resonant modes of the ring cavity, centered near 3.3 THz, with light injected into the ring QCL via a bus waveguide. By tuning the power and frequency of the injected light, we show that comb formation within the ring cavity can be selectively initiated and controlled. Numerical simulations indicate that this comb is primarily frequency-modulated, with the optical injection acting as a trigger for comb generation.

Our study also highlights the potential of the ring QCL to serve as a filter, effectively shaping the output of the DFB QCL. Additionally, we conducted a similar experiment using a racetrack structure instead of a ring and observed comparable phenomena. This approach shows great promise for applications in terahertz photonic integrated circuits, where waveguide couplers efficiently facilitate the injection and extraction of radiation from the ring cavity. These findings open new possibilities for generating novel comb states in the terahertz range, such as frequency-modulated waves and solitons, thereby expanding the functionality and application scope of THz QCLs in integrated photonics.
DOI: 10.3535/l5q-k7f-fqw
title: Receptaculites Deshayes in Bory de St.-Vincent, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zr7-qx4-p55
title: Ozarkodina bohemica longa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3413614.v2
title: Validated screening tools for common mental disorders in low and middle income countries: A systematic review. (Ali et al., 2016) PLOS ONE. S3 Quality Appraisal

description: Quality appraisal of all studies included in Ali et al. (2016) Validated screening tools for common mental disorders in low and middle income countries: A systematic review. PLOS ONE.
DOI: 10.3535/cy0-k0v-5az
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hb8-cdn-rpq
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11159993.v1
title: mario.tif

description: The "raw image" in Fig. 2. It is a raw image of a super Mario that captured by our light field IMS system.
DOI: 10.17632/kh4vf897fp
title: ChatGPT-medical use

description: The purpose of this study was to assess ChatGPT's ability and its potential risks in medical guidance for patients with MAFLD.  The study was conducted in February 2023. We simulated the questions raised by patients with MAFLD, and tested 110 questions in six aspects, including concept, diagnosis, progression, prevention, treatment and comorbidity. Each question was submitted to ChatGPT three times. Appropriateness and consistency were evaluated. In the data set, we presented the questions and responding answers. Judgments for consistency and appropriateness and reasons were also provided.
DOI: 10.3535/b81-g8a-phe
title: †Obolus apollinis Eichwald, 1829

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/d19-4rv-lbl
title: †Obolus apollinis Eichwald, 1829

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/frg-3cs-rdv
title: †Skenidioides Schuchert & Cooper, 1931

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m2t-txq-j6c
title: Gypsum

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27184398.v1
title: Global monthly and annual <i>R</i><sub>s</sub> from 1982 to 2018

description: We provide the data for predicted soil respiration (<i>R</i><sub>s</sub>) from deep learning model (MLP). The resolution for all .tif files is 0.05°. The unit is expressed in g C m<sup>-2</sup> year<sup>-1</sup> (for annual <i>R</i><sub>s</sub>) and in g C m<sup>-2</sup> month<sup>-1</sup> (for monthly <i>R</i><sub>s</sub>).The R code used for the paper figures is available in the zip file "R code".<br><b>Note that any use of the data or code should cite the original article:</b><br><br>Laffitte, B., Zhou, T., Yang, Z., Ciais, P., Jian, J., Huang, N., Seyler, B.C., Pei, X. and Tang, X. (2025), Timescale Matters: Finer Temporal Resolution Influences Driver Contributions to Global Soil Respiration. Glob Change Biol, 31: e70118. <b>https://doi.org/10.1111/gcb.70118</b><br>
DOI: 10.3535/3v1-mjr-8bz
title: †Skenidioides Schuchert & Cooper, 1931

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qtq-19e-9an
title: Wurtzite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nnr-hcm-pan
title: †Skenidioides Schuchert & Cooper, 1931

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tsp-gzd-p0v
title: †Skenidioides Schuchert & Cooper, 1931

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23652730.v1
title: Power_system_inertia_estimation_with_CNN_Linaro_et_al_2023

description: Data for the paper "Continuous Estimation of Power System Inertia Using Convolutional Neural Networks " by Daniele Linaro, Federico Bizzarri, Davide del Giudice, Cosimo Pisani, Giorgio M. Giannuzzi, Samuele Grillo and Angelo Brambilla.<br> This zip file contains the data required to generate all the figures in the paper, including those in the supplementary materials. Two Jupyter notebooks are included, for the main and supplementary figures, respectively. <br> For any question, please contact danielelinaro@gmail.com.
DOI: 10.6084/m9.figshare.5125129.v1
title: Supplementary Material for: Complex Three-Way Translocation Involving <b><i>MLL</i></b>, <b><i>ELL</i></b>, <b><i>RREB1</i></b>, and <b><i>CMAHP </i></b>Genes in an Infant with Acute Myeloid Leukemia and t(6;19;11)(p22.2;p13.1;q23.3)

description: Rearrangements affecting the <i>MLL </i>gene in hematological malignancies are associated with poor prognosis. Most often they are reciprocal translocations and more rarely complex forms involving at least 3 chromosomes. We describe an unusual case with cutaneous leukemic infiltrates that waxed and waned until progression to acute myeloid leukemia, AML-M5. The leukemic cells harbored a novel apparent 3-way translocation t(6;19;11)(p22.2;p13.1;q23.3). We utilized advanced molecular cytogenetic methods including 24-color karyotyping, high-resolution array comparative genomic hybridization (aCGH) and DNA sequencing to characterize the genomic complement in the leukemic cells from aspirated bone marrow cells at AML diagnosis. Karyotyping showed 47,XY,t(6;19;11)(p22;p13;q23),+der(6)t(6;11)(p22;q23)[17]/48,sl,+8[3]/48,sl,+8,der(12)t(1;12)(q11;p13)[3]/ 48,sdl,der(Y)t(Y;1)(q12;q11),+8[7] conferring <i>MLL-ELL</i> fusion. Oligo-aCGH analysis confirmed gains of 6p22qter and 11q23.3qter involving the <i>CMAHP</i> and <i>MLL </i>genes, respectively. DNA sequencing disclosed an additional breakpoint at 6p24.3 (at <i>RREB1</i> gene). Retrospective fluorescence in situ hybridization revealed presence of the <i>MLL</i>-involving rearrangement in the initial stages of disease before clear morphological signs of bone marrow involvement. The patient responded well to therapy and remains in remission &gt;6 years from diagnosis. This apparent 3-way translocation is remarkable because of its rarity and presentation with myeloid sarcoma, and may, as more cases are characterized, further our understanding onto how such complex translocations contribute to promote leukemogenesis and respond to therapy.
DOI: 10.17632/pbjk3357xw
title: Revision of Mediterranean Ascidians.Revised chapter with updated species

description: Revision of Mediterranean Ascidians.Revised chapter with updated species
DOI: 10.3535/a2t-p3n-fl2
title: †Obolus apollinis Eichwald, 1829

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r4z-7q6-k4x
title: Amazonite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gf7-b86-ejk
title: Siltstone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23284790.v1
title: Leaf litter presence in the non-growing season prolongs plant legacy effects on soil fungal communities and succeeding plant growth

description: The data includes soil environment data during the regulation phase and plant biomass data during the feedback phase
DOI: 10.6084/m9.figshare.28578656.v1
title: graphene_coord.npy

description: coords of graphene C-atoms
DOI: 10.3535/305-wre-2l3
title: †Ungula convexa Pander, 1830

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s45-65p-6ye
title: Tahulaspis ordinata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23903043.v1
title: Global biogeographic analysis of chloroplast and nuclear DNA of apomictic dandelions (<i>Taraxacum sp.</i>) reveals high genetic diversity and a history of sexual reproductionUntitled Item

description: Microsatellite data for global dandelion samples for 6 SSR loci
DOI: 10.17632/znd6v266cx
title: Raw data to Bredeck et al., 2021, Nanomaterials

description: In this repository you find the raw data to the following publication.

Bredeck, G.; Kämpfer, A.A.M.; Sofranko, A.; Wahle, T.; Büttner, V.; Albrecht, C.; Schins, R.P.F. Ingested Engineered Nanomaterials Affect the Expression of Mucin Genes—An In Vitro-In Vivo 
Comparison. Nanomaterials 2021, 11.
DOI: 10.3535/70h-tlj-c3r
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xbl-aeh-6ha
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12203249.v1
title: Data from: The role of herbivory in the macroevolution of vertebrate hormone dynamics

description: This data accompanies our 2020 publication in Ecology Letters titled "The role of herbivory in the macroevolution of vertebrate hormone dynamics." <br>Edwards_etal_2020_EcolLett contains 8 tabs: 4 partitions of the dataset with a tab for their corresponding metadata. The "sample_level" tab contains the individual level data on glucocorticoids measurements, species diet, species mass, and factors associated with sample collection. Column information is described in the "sample_level_meta" tab. The "species_level" tab contains the data partitioned at the species level, and column information is described in "species_level_meta". The "desantis" tab has the original data from Desantis et al. 2013 in orange text and reassignments in black text. The "hbase" tab has the original data from the HormoneBase used in Vitousek et al. 2019 in orange text and reassignments in black text. Edwards_etal_2020_phylo is the phylogeny file for the species included in the above dataset.
DOI: 10.17632/spwn5zw6ns
title: Dataset of Occurrence of mycotoxins in pulses

description: The dataset contains all literature revised with the categories generated by the authors to describe each study. The Excel file contains two sheets: the first one is named “Included studies,” which are the articles used to make the analyses. The second sheet is called “Excluded studies,” which are revised articles but do not comply with selection criteria.

The list of categories available in the document are: continent, country classification by income (2021-2022), country/region of origin of the samples, pulse(s) involved in the study, mycotoxin(s) analyzed, contamination levels in the studied pulse(s), other toxins, mycoflora, reference(s) used for classification of mycoflora, highlights, reference, the title of publication, DOI, the decade of publication, the composition of the research group (countries’ affiliations), type of global collaboration, research aim, name of the journal, impact factor, ISSN, editorial or publisher, number of samples, detection technique, Was the method validated? (could be tested on other product), observations about the method in the current research, Was the method tested in the studied pulse(s)?, reference for validation method, and observations about reference method.
DOI: 10.3535/0kb-rle-tdl
title: †Skenidioides Schuchert & Cooper, 1931

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8e7-617-df7
title: †Obolus Eichwald, 1829

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6h0-19v-h8h
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s5x-d7v-qmx
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.c.3777803_d7.v1
title: MOESM6 of Artemisinin resistance without pfkelch13 mutations in Plasmodium falciparum isolates from Cambodia

description: Additional file 7. All positions that are variant in RSA0â  3h phenotyped isolates.
DOI: 10.6084/m9.figshare.c.3884047_d2.v1
title: Additional file 2: MovieÂ 2. of Microarchitecture of the tsetse fly proboscis

description: Clusters of Trypanosoma congolense within the labrum. (ZIP 420 kb)
DOI: 10.25378/janelia.7704398.v1
title: MouseLight Neuron AA0707

description: A vast neural tracing effort by a team of Janelia scientists has upped the number of fully-traced neurons in the mouse brain by a factor of 10. Researchers can now download and browse the data in three dimensions. <br>Inside the mouse brain, individual neurons zigzag across hemispheres, embroider branching patterns and, researchers have now discovered, can even spool out spindly fibers up to 45 centimeters long.<br>Scientists can see and explore these wandering neural traces in 3-D in the most detailed map of mouse brain wiring yet created. The map reconstructs the shape and position of more than 300 of the 70 million neurons in the mouse brain. Previous efforts to trace the path of individual neurons had topped out in the dozens. <br>The selectively-labeled neurons were mapped in an iterative process with two-photon microscopy. The brain is sliced in 200-micron sections and a few dozen neurons are labeled at a time and imaged. Each brain imaged yields about 50 terabytes of data, each containing mapped neurons which can be browsed via the NeuronBrowser application. Researchers interested in the complete raw data set should contact Janelia to discuss obtaining it via hardware transfer.
DOI: 10.3535/3a2-2qw-dns
title: Vertebrata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sxz-819-1hj
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14245538.v1
title: Impacts of detritivore diversity loss on instream decomposition are greatest in the tropics

description: Data from a globally distributed experiment (38 streams across 23 countries in 6 continents) using standardised methods to assess instream litter decomposition (total and detritivore-mediated) and a set of characteristics of detritivore assemblages (abundance, biomass, body size, body mass and composition).
DOI: 10.6084/m9.figshare.26278654.v2
title: PP2A:B55-p107/Eya3

description: Supporting data for manuscript
DOI: 10.17632/v54c5b2wft
title: Supporting Data for: Antimony Isotopic Fractionation during Microbial Reduction of Antimonate by Desulfuribacillus stibiiarsenatis MLFW-2

description: The data associated with the article "Antimony Isotopic Fractionation during Microbial Reduction of Antimonate by Desulfuribacillus stibiiarsenatis MLFW-2" by Hannah Veldhuizen, Thomas Johnson, Robert Sanford, and Thomas Kulp. The uploaded data file includes a table with Sb concentration and isotope data for all experiments and controls. 

The redox reactions of antimony (Sb) play a big role in the mobility of Sb in the environment where Sb(V) is more mobile than Sb(III). Sb isotope ratio measurements (δ123Sb) can serve as an indicator of Sb redox reactions and immobilization. During reduction of Sb(V), the remaining reactant becomes enriched in the positive δ123Sb and the product becomes enriched in the negative δ123Sb. In this study we show that Sb(V) is reduced to Sb(III) by the microorganism, Desulfuribacillus stibiiarsenatis MLFW-2, by 59% to 85% over 96 hours. For this reaction, a kinetic isotope effect produces an isotopic fractionation (ε ≈ δinstantaneous product − δreactant) ranging from -1.05 ± 0.03‰ to -1.29 ± 0.18‰ (n=5, 2σ).
DOI: 10.3535/fl3-q0k-m08
title: Phlebolepis elegans (Pander, 1856)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n3x-jx7-tyr
title: Procephalaspis oeselensis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12410360.v1
title: Actinomyces pangenome for TM7x host range

description: Pangenome comparing the genomes of 23 oral Actinomyces studied for their varying ability to host the saccharibacterium TM7x. Experimental co-culture revealed that while all hosts eventually reached a stable relationship with TM7x, some hosts had a significant negative effect upon exposure to TM7x (termed a growth crash) while others did not (no measurable crash in population size / growth). This pangenome was constructed to compare their genomes to identify genetic and functional signatures that might underly their differential response to TM7x.
DOI: 10.6084/m9.figshare.16416822.v1
title: combined_ukbbCOVID_meta.txt

description: A bivariate genomic scan using the GWAS of healthy aging and UKBB COVID-19 infection to identify the genetic variants that contribute to both aging and the risk of COVID-19, i.e., aging-related COVID-19 risk.<br>
DOI: 10.3535/fmv-c3z-njj
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vz2-y60-b26
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28574015.v1
title: The raw sequencing data: Tire microplastics reduce soil microbial diversity and network complexity and stability, and induce microbial homogenization

description: The raw sequencing data: Tire microplastics reduce soil microbial diversity and network complexity and stability, and induce microbial homogenization
DOI: 10.17632/49szgbdyy4
title: Supplementary Tables

description: Cox proportional hazard model analysis for risk of cardiovascular diseases.
DOI: 10.3535/294-r07-tpc
title: Anaspida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hxv-d5b-kgb
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.