cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc29yh2v
title: CCDC 2143497: Experimental Crystal Structure Determination

description: Related Article: Anurag Singh, Arnab Dey, Kuntal Pal, Om Prakash Dash, Chandra M. R. Volla|2022|Org.Lett.|24|1941|doi:10.1021/acs.orglett.2c00320
DOI: 10.34740/kaggle/dsv/3360046
title: World cities database
DOI: 10.6084/m9.figshare.19424759
title: AB_Grassland_header_data_v10_with_grazing.csv

description: Statistical analysis (R script), tables and figures used in the publication: Zapisocki, Z., Murillo, R.A., Wagner, V. (in press) Non-Native Plant invasions in Prairie Grasslands of Alberta, Canada. Rangeland Ecology and Management.<br>
DOI: 10.6084/m9.figshare.19424759.v1
title: AB_Grassland_header_data_v10_with_grazing.csv

description: Statistical analysis (R script), tables and figures used in the publication: Zapisocki, Z., Murillo, R.A., Wagner, V. (in press) Non-Native Plant invasions in Prairie Grasslands of Alberta, Canada. Rangeland Ecology and Management.<br>
DOI: 10.6084/m9.figshare.19424762
title: AB_Grassland_header_data_v10_cool_wet_only_v1.csv

description: Statistical analysis (R script), tables and figures used in the publication: Zapisocki, Z., Murillo, R.A., Wagner, V. (in press) Non-Native Plant invasions in Prairie Grasslands of Alberta, Canada. Rangeland Ecology and Management.
DOI: 10.6084/m9.figshare.19424762.v1
title: AB_Grassland_header_data_v10_cool_wet_only_v1.csv

description: Statistical analysis (R script), tables and figures used in the publication: Zapisocki, Z., Murillo, R.A., Wagner, V. (in press) Non-Native Plant invasions in Prairie Grasslands of Alberta, Canada. Rangeland Ecology and Management.
DOI: 10.6084/m9.figshare.19424765
title: AB_Grassland_header_data_v10_hot_dry_only.csv

description: Statistical analysis (R script), tables and figures used in the publication: Zapisocki, Z., Murillo, R.A., Wagner, V. (in press) Non-Native Plant invasions in Prairie Grasslands of Alberta, Canada. Rangeland Ecology and Management.
DOI: 10.6084/m9.figshare.19424765.v1
title: AB_Grassland_header_data_v10_hot_dry_only.csv

description: Statistical analysis (R script), tables and figures used in the publication: Zapisocki, Z., Murillo, R.A., Wagner, V. (in press) Non-Native Plant invasions in Prairie Grasslands of Alberta, Canada. Rangeland Ecology and Management.
DOI: 10.6084/m9.figshare.19424768
title: AB_Grassland_header_data_v10_hot_dry_only_outlier_removed.csv

description: Statistical analysis (R script), tables and figures used in the publication: Zapisocki, Z., Murillo, R.A., Wagner, V. (in press) Non-Native Plant invasions in Prairie Grasslands of Alberta, Canada. Rangeland Ecology and Management.
DOI: 10.6084/m9.figshare.19424768.v1
title: AB_Grassland_header_data_v10_hot_dry_only_outlier_removed.csv

description: Statistical analysis (R script), tables and figures used in the publication: Zapisocki, Z., Murillo, R.A., Wagner, V. (in press) Non-Native Plant invasions in Prairie Grasslands of Alberta, Canada. Rangeland Ecology and Management.
DOI: 10.6084/m9.figshare.19424780
title: Zapisocki_et_al_data_scripts.zip

description: Statistical analysis (R script), tables and figures used in the publication: Zapisocki, Z., Murillo, R.A., Wagner, V. (in press) Non-Native Plant invasions in Prairie Grasslands of Alberta, Canada. Rangeland Ecology and Management.
DOI: 10.34740/kaggle/dsv/3360327
title: Michelin Guide Restaurants 2021
DOI: 10.6084/m9.figshare.19424885
title: Additional file 8 of Dexmedetomidine reduces propofol-induced hippocampal neuron injury by modulating the miR-377-5p/Arc pathway

description: Additional file 8.
DOI: 10.6084/m9.figshare.19424885.v1
title: Additional file 8 of Dexmedetomidine reduces propofol-induced hippocampal neuron injury by modulating the miR-377-5p/Arc pathway

description: Additional file 8.
DOI: 10.6084/m9.figshare.19425027.v1
title: Additional file 2 of Safe femoral condyle range for the reverse Rigidfix femoral fixation device in anterior cruciate ligament reconstruction

description: Additional file 2.
DOI: 10.6084/m9.figshare.19425024.v1
title: Additional file 1 of Safe femoral condyle range for the reverse Rigidfix femoral fixation device in anterior cruciate ligament reconstruction

description: Additional file 1.
DOI: 10.6084/m9.figshare.19425056.v1
title: Additional file 1 of MinION, a portable long-read sequencer, enables rapid vaginal microbiota analysis in a clinical setting

description: Additional file 1: Supplementary Table S1. Representative bacterial genomes stored in the GenomeSync database.
DOI: 10.6084/m9.figshare.19425062.v1
title: Additional file 3 of MinION, a portable long-read sequencer, enables rapid vaginal microbiota analysis in a clinical setting

description: Additional file 3: Supplementary Table S2. Details of identified species with V1-9 16S rRNA analysis using MinION.
DOI: 10.6084/m9.figshare.19425065.v1
title: Additional file 4 of MinION, a portable long-read sequencer, enables rapid vaginal microbiota analysis in a clinical setting

description: Additional file 4: Supplementary Table S3. Taxonomic profiles of the vaginal microbiota analyzed by FASTQ 16S workflow.
DOI: 10.6084/m9.figshare.19425072
title: Additional file 1 of Cross-ethnic analysis of common gene variants in hemostasis show lopsided representation of global populations in genetic databases

description: Additional file 1: Table S1. A list of 845 SNPs in genes associated with hemostasis. ClinVar annotations are shown on the column farthest to the right.
DOI: 10.6084/m9.figshare.19425072.v1
title: Additional file 1 of Cross-ethnic analysis of common gene variants in hemostasis show lopsided representation of global populations in genetic databases

description: Additional file 1: Table S1. A list of 845 SNPs in genes associated with hemostasis. ClinVar annotations are shown on the column farthest to the right.
DOI: 10.6084/m9.figshare.19425087
title: Additional file 5 of Cross-ethnic analysis of common gene variants in hemostasis show lopsided representation of global populations in genetic databases

description: Additional file 5: Table S2. Multi-SNP haplotype phasing for hemostatic genes constructed with the Shapeit v2 method. Each tab in the Excel file shows haplotypes for one hemostatic gene.
DOI: 10.6084/m9.figshare.19425087.v1
title: Additional file 5 of Cross-ethnic analysis of common gene variants in hemostasis show lopsided representation of global populations in genetic databases

description: Additional file 5: Table S2. Multi-SNP haplotype phasing for hemostatic genes constructed with the Shapeit v2 method. Each tab in the Excel file shows haplotypes for one hemostatic gene.
DOI: 10.6084/m9.figshare.19425009.v1
title: Additional file 7 of Metagenomic strain detection with SameStr: identification of a persisting core gut microbiota transferable by fecal transplantation

description: Additional file 6: Table S1. Sample and Case Metadata. Table S2. WGS Accession Identifiers. Table S3. WGS QC Data. Table S4. Reference Accessions. Table S5. Species Metadata. Table S6. Logistic Regression of (Un)related Sample Pairs at Taxonomic Levels. Table S7. Shared Species and Strains for Individual Cases. Table S8. Events with Competing Strains. Table S9. Strain Transmission Rates (per Species). Table S10. Strain Transmission Rates (per Genus). Table S11. Potential Sample Mislabellings.
DOI: 10.6084/m9.figshare.19425110
title: Additional file 6 of Evaluation of saliva self-collection devices for SARS-CoV-2 diagnostics

description: Additional file 6: Table S1. Internal reliability of survey question measured with Cronbach’s alpha.
DOI: 10.6084/m9.figshare.19425110.v1
title: Additional file 6 of Evaluation of saliva self-collection devices for SARS-CoV-2 diagnostics

description: Additional file 6: Table S1. Internal reliability of survey question measured with Cronbach’s alpha.
DOI: 10.6084/m9.figshare.19425113
title: Additional file 7 of Evaluation of saliva self-collection devices for SARS-CoV-2 diagnostics

description: Additional file 7: Table S2. Internal reliability for survey questions. The majority of internally reliable survey questions did not differ significantly across collection devices. (a) Analysis of responses for participant and observer survey questions found to be internally reliable with Cronbach’s alpha. (b) Analysis of laboratory survey responses.
DOI: 10.6084/m9.figshare.19425113.v1
title: Additional file 7 of Evaluation of saliva self-collection devices for SARS-CoV-2 diagnostics

description: Additional file 7: Table S2. Internal reliability for survey questions. The majority of internally reliable survey questions did not differ significantly across collection devices. (a) Analysis of responses for participant and observer survey questions found to be internally reliable with Cronbach’s alpha. (b) Analysis of laboratory survey responses.
DOI: 10.6084/m9.figshare.19425116
title: Additional file 8 of Evaluation of saliva self-collection devices for SARS-CoV-2 diagnostics

description: Additional file 8: Table S6. Cycle threshold values for nucleocapsid and RNase P genes from simulated shipping data. Saliva samples were spiked at 50 and 12 SARS CoV-2 copies/µL, then processed fresh, with the summer or winter profiles.
DOI: 10.6084/m9.figshare.19425116.v1
title: Additional file 8 of Evaluation of saliva self-collection devices for SARS-CoV-2 diagnostics

description: Additional file 8: Table S6. Cycle threshold values for nucleocapsid and RNase P genes from simulated shipping data. Saliva samples were spiked at 50 and 12 SARS CoV-2 copies/µL, then processed fresh, with the summer or winter profiles.
DOI: 10.6084/m9.figshare.19424999.v1
title: Additional file 1 of De novo assembly of a fruit transcriptome set identifies AmMYB10 as a key regulator of anthocyanin biosynthesis in Aronia melanocarpa

description: Additional file 1: Supplementary Table S2. Primer sequences used for qRT-PCR validation of RNA-seq data and cloning.
DOI: 10.6084/m9.figshare.19425126
title: Additional file 17 of Whole-genome resequencing reveals genomic footprints of Italian sweet and hot pepper heirlooms giving insight into genes underlying key agronomic and qualitative traits

description: Additional file 17: Table S10. Gene and isoforms in the four heirlooms and the reference CM334.
DOI: 10.6084/m9.figshare.19425126.v1
title: Additional file 17 of Whole-genome resequencing reveals genomic footprints of Italian sweet and hot pepper heirlooms giving insight into genes underlying key agronomic and qualitative traits

description: Additional file 17: Table S10. Gene and isoforms in the four heirlooms and the reference CM334.
DOI: 10.6084/m9.figshare.19425129
title: Additional file 18 of Whole-genome resequencing reveals genomic footprints of Italian sweet and hot pepper heirlooms giving insight into genes underlying key agronomic and qualitative traits

description: Additional file 18: Table S11. Gene ID in the four heirlooms and the reference CM334.
DOI: 10.6084/m9.figshare.19425129.v1
title: Additional file 18 of Whole-genome resequencing reveals genomic footprints of Italian sweet and hot pepper heirlooms giving insight into genes underlying key agronomic and qualitative traits

description: Additional file 18: Table S11. Gene ID in the four heirlooms and the reference CM334.
DOI: 10.6084/m9.figshare.19424991.v1
title: Additional file 7 of Interpretable prediction of necrotizing enterocolitis from machine learning analysis of premature infant stool microbiota

description: Additional file 7: Data S2. Taxa importance ranks after interpratability analysis.
DOI: 10.6084/m9.figshare.19424990.v1
title: Additional file 3 of OVOL2 impairs RHO GTPase signaling to restrain mitosis and aggressiveness of Anaplastic Thyroid Cancer

description: Additional file 3:
DOI: 10.6084/m9.figshare.19424987.v1
title: Additional file 2 of OVOL2 impairs RHO GTPase signaling to restrain mitosis and aggressiveness of Anaplastic Thyroid Cancer

description: Additional file 2:
DOI: 10.6084/m9.figshare.19424976.v1
title: Additional file 2 of Interpretable prediction of necrotizing enterocolitis from machine learning analysis of premature infant stool microbiota

description: Additional file 2: Data S1. Complete lists of taxa included in models after pre-processing.
DOI: 10.6084/m9.figshare.19424390
title: Big Data

description: Big data set
DOI: 10.6084/m9.figshare.19425065
title: Additional file 4 of MinION, a portable long-read sequencer, enables rapid vaginal microbiota analysis in a clinical setting

description: Additional file 4: Supplementary Table S3. Taxonomic profiles of the vaginal microbiota analyzed by FASTQ 16S workflow.
DOI: 10.6084/m9.figshare.19425062
title: Additional file 3 of MinION, a portable long-read sequencer, enables rapid vaginal microbiota analysis in a clinical setting

description: Additional file 3: Supplementary Table S2. Details of identified species with V1-9 16S rRNA analysis using MinION.
DOI: 10.6084/m9.figshare.19425056
title: Additional file 1 of MinION, a portable long-read sequencer, enables rapid vaginal microbiota analysis in a clinical setting

description: Additional file 1: Supplementary Table S1. Representative bacterial genomes stored in the GenomeSync database.
DOI: 10.6084/m9.figshare.19425027
title: Additional file 2 of Safe femoral condyle range for the reverse Rigidfix femoral fixation device in anterior cruciate ligament reconstruction

description: Additional file 2.
DOI: 10.6084/m9.figshare.19425024
title: Additional file 1 of Safe femoral condyle range for the reverse Rigidfix femoral fixation device in anterior cruciate ligament reconstruction

description: Additional file 1.
DOI: 10.6084/m9.figshare.19425009
title: Additional file 7 of Metagenomic strain detection with SameStr: identification of a persisting core gut microbiota transferable by fecal transplantation

description: Additional file 6: Table S1. Sample and Case Metadata. Table S2. WGS Accession Identifiers. Table S3. WGS QC Data. Table S4. Reference Accessions. Table S5. Species Metadata. Table S6. Logistic Regression of (Un)related Sample Pairs at Taxonomic Levels. Table S7. Shared Species and Strains for Individual Cases. Table S8. Events with Competing Strains. Table S9. Strain Transmission Rates (per Species). Table S10. Strain Transmission Rates (per Genus). Table S11. Potential Sample Mislabellings.
DOI: 10.6084/m9.figshare.19424999
title: Additional file 1 of De novo assembly of a fruit transcriptome set identifies AmMYB10 as a key regulator of anthocyanin biosynthesis in Aronia melanocarpa

description: Additional file 1: Supplementary Table S2. Primer sequences used for qRT-PCR validation of RNA-seq data and cloning.
DOI: 10.6084/m9.figshare.19424991
title: Additional file 7 of Interpretable prediction of necrotizing enterocolitis from machine learning analysis of premature infant stool microbiota

description: Additional file 7: Data S2. Taxa importance ranks after interpratability analysis.
DOI: 10.6084/m9.figshare.19424990
title: Additional file 3 of OVOL2 impairs RHO GTPase signaling to restrain mitosis and aggressiveness of Anaplastic Thyroid Cancer

description: Additional file 3:
DOI: 10.6084/m9.figshare.19424987
title: Additional file 2 of OVOL2 impairs RHO GTPase signaling to restrain mitosis and aggressiveness of Anaplastic Thyroid Cancer

description: Additional file 2:
DOI: 10.6084/m9.figshare.19424976
title: Additional file 2 of Interpretable prediction of necrotizing enterocolitis from machine learning analysis of premature infant stool microbiota

description: Additional file 2: Data S1. Complete lists of taxa included in models after pre-processing.
DOI: 10.25919/y0vj-me59
title: Parkes observations for project P1131 semester 2021OCTS_11

description: Fast Radio Bursts (FRBs) are extragalactic radio transients with the duration time in the range of several microseconds to tens of milliseconds. The origin of them is still unclear. Ultraluminous X-ray Sources (ULXs) are objects that mostly discovered in external galaxies which host black holes or neutron stars, with isotropic luminosities exceeding the usual Eddington value for stellar-mass black holes. The host galaxies of ULXs, and their spatial offsets within their hosts, show broad similarities to those of FRB. Periodicity of days to years of some repeated FRBs could be attributed to the companion effect of ULXs. Moreover, pulsing ULXs (PULXs) which hots neutron stars may be the manifestation of accreting magnetars. Therefore, we propose targeted FRB searches of known PULXs, which have not yet been carried out by other telescopes according to published literature to date. Our observations will play an important role in investigating the FRB progenitors. If FRBs were detected in our selected ULXs, then puzzle of FRBs' origin would be directly resolved. If no FRB is detected, we can still constrain some ULX-related models statistically, e.g. the upper limit of the burst rate, the period of duty cycle, etc. Our observations can also be used to hunt for radio pulsars in PULXs.
DOI: 10.6084/m9.figshare.19401524
title: Supplemental Information

description: This data contains sample size calculation, statistical analysis and all the results included in this research.
DOI: 10.6084/m9.figshare.19401524.v2
title: Supplemental Information

description: This data contains sample size calculation, statistical analysis and all the results included in this research.
DOI: 10.6084/m9.figshare.19401410.v2
title: Master Chart of primary and secondary variables of both the groups

description: This dataset includes four files:1) Demographic data2) Master chart for the plaque index and bleeding index3)Master chart for both the groups for all the parameters4) Percentage of root coverage calculation data
DOI: 10.6084/m9.figshare.19401524.v1
title: Sample size calculation,Statistical analysis and results

description: This data contains sample size calculation, statistical analysis and all the results included in this research.
DOI: 10.6084/m9.figshare.19424816
title: pnas_dataset.csv

description: The dataset is acquired via the VIRRION platform designed for label-free capture and enrichment of viruses. It consists of Raman spectra of three groups of RNA viruses, including human respiratory viruses (influenza A H1N1 and H3N2, influenza B, rhinovirus, respiratory syncytial virus (RSV)), avian respiratory viruses (influenza A H5N2 and H7N2, infectious bronchitis virus (IBV), reovirus), and human enteroviruses (Coxsackievirus B type 1 and 3 (CVB1, CVB3), enteroviruses EV70 and EV71). Avian influenza virus (AIV) was propagated in specific-pathogen-free (SPF) embryonating chicken eggs (ECE) via allantoic cavity route inoculation at 9-11 days of age. The inoculated ECEs were incubated in a 37°C egg incubator for 3d (or 72 h) and then were removed/chilled at 4 °C for a minimum of 4 h or overnight. Allantoic fluid (AF) containing the virus was harvested from each egg using a sterile technique (a 3 mL sterile syringe with a 25G×5/8” needle). The harvested AF was clarified by centrifugation at 8000-1000 rpm for 10 min. Virus titer was determined in embryo infectious doses 50% (EID50) titers by the Reed-Muench method. Briefly, the EID50 test was conducted in ECE. The propagated fresh stock H5N2 AIV was prepared in 10-fold serial dilutions from 10-1 through 10-9. Each dilution was inoculated into 5 eggs, 0.1 mL per egg. The inoculated eggs were incubated at 37 °C for 72 hours. The eggs were candled daily to remove dead eggs to chill them at 4 °C refrigerator. After 72 hours of incubation, allantoic fluid was harvested from each egg. H1N1, H3N2, FluB, Rhinovirus, and RSV were prepared in Madin-Darby canine kidney-London (MDCK-London) cell culture. MDCK-London cells were cultured in Dulbecco's modified Eagle's medium (DMEM; Invitrogen, Carlsbad, CA) containing 10% fetal bovine serum and 1% penicillin-streptomycin, and incubated at 37°C in a humidified CO2 incubator. Enteroviruses (CVB1, CVB3, EV70, EV71, or PV2) were propagated using HEK 293 cell lines. The VIRRION platform constructed with nitrogen-doped carbon nanotube arrays and gold (Au) nanoparticles was used as SERS substrate for collecting Raman spectra from virus samples. A 100 μL sample of each virus was directly dropped (drop-cast) onto the VIRRION Au-CNT substrate and air-dried at room temperature for 10 hrs prior to Raman measurements. Raman data acquisition was recorded using a Horiba-LabRAM HR Evolution system with a 785nm diode laser line. The laser power on the sample was ca. 3.6 mW, focused through a 100× objective. The 600 gr/mm grating was used with a spectral range from 500 cm-1 to 2000 cm-1. The typical acquisition time was 30 s. <br>
DOI: 10.5281/zenodo.6375779
title: 20220322 NCfracset3

description: 220322 NCfracset3 TBD220184
DOI: 10.5281/zenodo.6375778
title: 20220322 NCfracset3

description: 220322 NCfracset3 TBD220184
DOI: 10.3886/e113534v1-113280
title: Replication data for: Replication in Labor Economics: Evidence from Data, and What It Suggests

description: Examining the most heavily cited publications in labor economics from the early 1990s, I show that few of over 3,000 articles, citing them directly, replicates them. They are replicated more frequently using data from other time periods and economies, so that the validity of their central ideas has typically been verified. This pattern of scholarship suggests, beyond the currently required depositing of data and code upon publication, that there is little need for formal mechanisms for replication. The market for scholarship already produces replications of non-laboratory applied research.
DOI: 10.6084/m9.figshare.19391585
title: original data

description: Original data
DOI: 10.5281/zenodo.6385860
title: Multizygotic children discordant for autism

description: Multizygotic children discordant for autism spectrum disorders. Whole exome sequencing was done. <em>De novo</em> variants of the proband are included here.
DOI: 10.5281/zenodo.6385859
title: Multizygotic children discordant for autism

description: Multizygotic children discordant for autism spectrum disorders. Whole exome sequencing was done. <em>De novo</em> variants of the proband are included here.
DOI: 10.3886/e166021
title: RTE

description: This data set has responses of 400 parents of RTE students
DOI: 10.3886/e166021v1
title: RTE

description: This data set has responses of 400 parents of RTE students
DOI: 10.5281/zenodo.6385887
title: Monozygotic children discordant for autism

description: Monozygotic children discordant for autism spectrum disorders. Whole exome sequencing. <em>De novo</em> variants of the proband are listed here.
DOI: 10.5281/zenodo.6385886
title: Monozygotic children discordant for autism

description: Monozygotic children discordant for autism spectrum disorders. Whole exome sequencing. <em>De novo</em> variants of the proband are listed here.
DOI: 10.6084/m9.figshare.19425212
title: immune

description: Immune terms for ssGSEA
DOI: 10.6084/m9.figshare.19425212.v1
title: immune

description: Immune terms for ssGSEA
DOI: 10.5281/zenodo.6382519
title: Design Principles of PI(4,5)P2 Clustering Under Protein-Free Conditions: Specific Cation Effects and Calcium-Potassium Synergy

description: Last 60ns trajectories of all systems (S1-S3 and five replicas (R1-5) of S4). Each *.dcd file contains 2.4ns trajectory and CHARMM *.psf files are also provided.
DOI: 10.5281/zenodo.6382518
title: Design Principles of PI(4,5)P2 Clustering Under Protein-Free Conditions: Specific Cation Effects and Calcium-Potassium Synergy

description: Last 60ns trajectories of all systems (S1-S3 and five replicas (R1-5) of S4). Each *.dcd file contains 2.4ns trajectory and CHARMM *.psf files are also provided.
DOI: 10.21227/31ea-fj68
title: Epilepsy_data

description: It mainly includes the original BONN epilepsy EEG data set, as well as the EEG signals after the revised tunable Q-factor wavelet transform decomposition and reconstruction of the data set.