cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5918323.v1
title: Additional file 9: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S7. The expression profiles (log2-based values) of the soybean bZIP genes after flooding treatment. In this experiment, two-week-old soybean seedlings were transferred to the flooding conditions for a week, and flooding stress was imposed by placing the pots into a bigger pot with a trashcan liner filled up to a water level of 4Â cm above the soil surface for 7Â days. After 7Â days of treatment, the leaves were collected for experiment [30]. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.5918362
title: Additional file 9: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Functional characterization of bHLH proteins presumed from different plant species. (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.5918362.v1
title: Additional file 9: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Functional characterization of bHLH proteins presumed from different plant species. (XLSX 18Â kb)
DOI: 10.23729/23dd00b2-b9d7-467a-9cee-b4a122486039
title: SMEAR II Hyytiälä forest meteorology, greenhouse gases, air quality and soil

description: This dataset contains long-term measurements of 1) atmospheric greenhouse gas and trace gas concentrations (O3, NO, NO2, SO2, CO, CO2, H2O, CH4 and VOC) and 2) meteorology, solar and terrestrial radiation, and soil done at SMEAR II research station near Hyytiälä Forestry Field Station, Juupajoki, Finland during years 1996–2022.

The data were exported from SMEAR database on the dataset release date. Most recent version of the data are available at https://smear.avaa.csc.fi/.
DOI: 10.1184/r1/5919409
title: Successful Reorganization of Category-Selective Visual Cortex Following Occipito-Temporal Lobectomy in Childhood

description: This dataset includes fMRI raw data, behavioral data, experiment codes, and scripts related to a paper entitled: Liu, Nestor, Vida, Pyles, Patterson, Yang, Yang, Freud, and Behrmann (2018). Successful reorganization of category-selective visual cortex following occipito-temporal lobectomy in childhood. Cell Reports. The patient data include 4 category localizer and 2 retinotopic mapping sessions and anatomical scans. All Category Localizer runs in Patient UD were co-registered to the structural MRI from the first Category Localizer session. All Retinotopic Mapping runs in Patient UD were co-registered to the structural MRI from the first Retinotopic Mapping session.For each control, one anatomical/T1 run and three Category Localizer (EPI) runs were inlcuded , except only two runs for S7 . For more details, contact: behrmann@cmu.edu, tinaliutong@gmail.com.
DOI: 10.6084/m9.figshare.5923405
title: MOESM2 of Optimization of cellulolytic enzyme components through engineering Trichoderma reesei and on-site fermentation using the soluble inducer for cellulosic ethanol production from corn stover

description: Additional file 2: Table S2. Identified secreted proteins induced by MGD and CS.
DOI: 10.6084/m9.figshare.5923405.v1
title: MOESM2 of Optimization of cellulolytic enzyme components through engineering Trichoderma reesei and on-site fermentation using the soluble inducer for cellulosic ethanol production from corn stover

description: Additional file 2: Table S2. Identified secreted proteins induced by MGD and CS.
DOI: 10.6084/m9.figshare.5923456
title: Additional file 3: of Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection

description: Differential expression of the genes in response to H5N1 virus infection at 6-h post-infection. (XLS 8081 kb)
DOI: 10.6084/m9.figshare.5923456.v1
title: Additional file 3: of Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection

description: Differential expression of the genes in response to H5N1 virus infection at 6-h post-infection. (XLS 8081 kb)
DOI: 10.6084/m9.figshare.5923459
title: Additional file 4: of Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection

description: Differential expression of mature miRNAs with a minimum fold-change of 1.2. (XLS 137 kb)
DOI: 10.6084/m9.figshare.5923459.v1
title: Additional file 4: of Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection

description: Differential expression of mature miRNAs with a minimum fold-change of 1.2. (XLS 137 kb)
DOI: 10.6084/m9.figshare.5923468
title: Additional file 5: of Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection

description: Pathway enrichment of the mRNA genes inversely regulated with the targeting miRNAs for H1N1 and H5N1 virus-infected macrophage cells at 1-, 3-, and 6-h post-infection. (XLS 154 kb)
DOI: 10.6084/m9.figshare.5923468.v1
title: Additional file 5: of Whole transcriptome analysis reveals differential gene expression profile reflecting macrophage polarization in response to influenza A H5N1 virus infection

description: Pathway enrichment of the mRNA genes inversely regulated with the targeting miRNAs for H1N1 and H5N1 virus-infected macrophage cells at 1-, 3-, and 6-h post-infection. (XLS 154 kb)
DOI: 10.23729/b4575245-5612-4874-a33b-541b215b1a10
title: SMEAR II Hyytiälä forest eddy covariance

description: This dataset contains time series of turbulent exchange of CO2, heat, momentum, O3 and particles measured at SMEAR II research station near Hyytiälä Forestry Field Station, Juupajoki, Finland, during years 1997–2022. The flux measurements were done with several measurement setups above the forest and at 3 m height below the canopy.

The data were exported from SMEAR database on the dataset release date. Most recent version of the data are available at https://smear.avaa.csc.fi/.
DOI: 10.6084/m9.figshare.5925235
title: The primary NMR data for NGP-1a; The primary NMR data for NGP-2a; The primary NMR data for NGP-2b; The primary HPAEC data for β-glucanase degradation products of 1-KGP-P and 4-KGP-P from Structural characterization of alkali-soluble polysaccharides from <i>Panax ginseng</i> C. A. Meyer

description: This is the original data for the NMR spectrum of NGP-1a; This is the original data for the NMR spectrum of NGP-2a; This is the original data for the NMR spectrum of NGP-2b; This is the original data for the HPAEC result of β-glucanase degradation products of 1-KGP-P and 4-KGP-P
DOI: 10.6084/m9.figshare.5925235.v1
title: The primary NMR data for NGP-1a; The primary NMR data for NGP-2a; The primary NMR data for NGP-2b; The primary HPAEC data for β-glucanase degradation products of 1-KGP-P and 4-KGP-P from Structural characterization of alkali-soluble polysaccharides from <i>Panax ginseng</i> C. A. Meyer

description: This is the original data for the NMR spectrum of NGP-1a; This is the original data for the NMR spectrum of NGP-2a; This is the original data for the NMR spectrum of NGP-2b; This is the original data for the HPAEC result of β-glucanase degradation products of 1-KGP-P and 4-KGP-P
DOI: 10.6084/m9.figshare.5925472
title: Artifact related to Abstraction Refinement for Emptiness Checking of Alternating Data Automata (TACAS 2018 paper)

description: This dataset is associated with a published paper which presented a new model of alternating automata over infinite alphabets. This involved the development of two semi-algorithms inspired by two state-of the-art abstraction refinement model checking methods, lazy predicate abstraction and the Impact semi-algorithm. <br>The algorithms were implemented in a prototype tool using the Math-SAT5 SMT solver via the Java SMT interface for the satisfiability queries and interpolant generation, in the theory of linear integer arithmetic with uninterpreted Boolean functions (UFLIA).<br>The dataset includes .dylib (dynamic library) and .so (shared library files, and the example folder includes .ada (ADA source code). <br>A README file ("Instructions.txt") is also included with instructions to allow replication of the results of the second algorithm.
DOI: 10.6084/m9.figshare.5925472.v1
title: Artifact related to Abstraction Refinement for Emptiness Checking of Alternating Data Automata (TACAS 2018 paper)

description: This dataset is associated with a published paper which presented a new model of alternating automata over infinite alphabets. This involved the development of two semi-algorithms inspired by two state-of the-art abstraction refinement model checking methods, lazy predicate abstraction and the Impact semi-algorithm. <br>The algorithms were implemented in a prototype tool using the Math-SAT5 SMT solver via the Java SMT interface for the satisfiability queries and interpolant generation, in the theory of linear integer arithmetic with uninterpreted Boolean functions (UFLIA).<br>The dataset includes .dylib (dynamic library) and .so (shared library files, and the example folder includes .ada (ADA source code). <br>A README file ("Instructions.txt") is also included with instructions to allow replication of the results of the second algorithm.
DOI: 10.6084/m9.figshare.5927035
title: Additional file 2: of Characterization of cross-tissue genetic-epigenetic effects and their patterns in schizophrenia

description: Supplementary data file listing the SNPs which are cross-tissue meQTLs and SZ risks (p &lt; 10â 5) reported by the PGC SZ study. (CSV 163 kb)
DOI: 10.6084/m9.figshare.5927035.v1
title: Additional file 2: of Characterization of cross-tissue genetic-epigenetic effects and their patterns in schizophrenia

description: Supplementary data file listing the SNPs which are cross-tissue meQTLs and SZ risks (p &lt; 10â 5) reported by the PGC SZ study. (CSV 163 kb)
DOI: 10.6084/m9.figshare.5927062
title: Additional file 3: of Characterization of cross-tissue genetic-epigenetic effects and their patterns in schizophrenia

description: Supplementary data file listing the SNPs which are cross-tissue meQTLs, cross-tissue eQTLs, and SZ risks (p &lt; 10â 5). (CSV 153 kb)
DOI: 10.6084/m9.figshare.5927062.v1
title: Additional file 3: of Characterization of cross-tissue genetic-epigenetic effects and their patterns in schizophrenia

description: Supplementary data file listing the SNPs which are cross-tissue meQTLs, cross-tissue eQTLs, and SZ risks (p &lt; 10â 5). (CSV 153 kb)
DOI: 10.6084/m9.figshare.5927332
title: MOESM1 of Occurrence of multidrug-resistant and ESBL-producing atypical enteropathogenic Escherichia coli in China

description: Additional file 1. Antimicrobial susceptibility of 267 aEPEC strains tested in the study.
DOI: 10.6084/m9.figshare.5927332.v1
title: MOESM1 of Occurrence of multidrug-resistant and ESBL-producing atypical enteropathogenic Escherichia coli in China

description: Additional file 1. Antimicrobial susceptibility of 267 aEPEC strains tested in the study.
DOI: 10.6084/m9.figshare.5927353
title: MOESM2 of Occurrence of multidrug-resistant and ESBL-producing atypical enteropathogenic Escherichia coli in China

description: Additional file 2. Antimicrobial susceptibility profiles and resistance-related genes of 96 genome-sequenced aEPEC strains.
DOI: 10.6084/m9.figshare.5927353.v1
title: MOESM2 of Occurrence of multidrug-resistant and ESBL-producing atypical enteropathogenic Escherichia coli in China

description: Additional file 2. Antimicrobial susceptibility profiles and resistance-related genes of 96 genome-sequenced aEPEC strains.
DOI: 10.6084/m9.figshare.5927413
title: MOESM1 of Development of models for classification of action between heat-clearing herbs and blood-activating stasis-resolving herbs based on theory of traditional Chinese medicine

description: Additional file 1. Minimum standards of reporting checklist.
DOI: 10.6084/m9.figshare.5927413.v1
title: MOESM1 of Development of models for classification of action between heat-clearing herbs and blood-activating stasis-resolving herbs based on theory of traditional Chinese medicine

description: Additional file 1. Minimum standards of reporting checklist.
DOI: 10.6084/m9.figshare.5927434
title: MOESM2 of Development of models for classification of action between heat-clearing herbs and blood-activating stasis-resolving herbs based on theory of traditional Chinese medicine

description: Additional file 2. Raw data in TablesÂ 1, 2, 3, 4 and 5.
DOI: 10.6084/m9.figshare.5927434.v1
title: MOESM2 of Development of models for classification of action between heat-clearing herbs and blood-activating stasis-resolving herbs based on theory of traditional Chinese medicine

description: Additional file 2. Raw data in TablesÂ 1, 2, 3, 4 and 5.
DOI: 10.6084/m9.figshare.5927452
title: MOESM3 of Development of models for classification of action between heat-clearing herbs and blood-activating stasis-resolving herbs based on theory of traditional Chinese medicine

description: Additional file 3. The raw data in Figs.Â 5, 6 and 7.
DOI: 10.6084/m9.figshare.5927452.v1
title: MOESM3 of Development of models for classification of action between heat-clearing herbs and blood-activating stasis-resolving herbs based on theory of traditional Chinese medicine

description: Additional file 3. The raw data in Figs.Â 5, 6 and 7.
DOI: 10.6084/m9.figshare.5927467
title: MOESM4 of Development of models for classification of action between heat-clearing herbs and blood-activating stasis-resolving herbs based on theory of traditional Chinese medicine

description: Additional file 4. The TCM-HP for HCHs and BARSHs.
DOI: 10.6084/m9.figshare.5927467.v1
title: MOESM4 of Development of models for classification of action between heat-clearing herbs and blood-activating stasis-resolving herbs based on theory of traditional Chinese medicine

description: Additional file 4. The TCM-HP for HCHs and BARSHs.
DOI: 10.6084/m9.figshare.5927488
title: MOESM5 of Development of models for classification of action between heat-clearing herbs and blood-activating stasis-resolving herbs based on theory of traditional Chinese medicine

description: Additional file 5. The codes of kNN, SVM, DBN, CNN.
DOI: 10.6084/m9.figshare.5927488.v1
title: MOESM5 of Development of models for classification of action between heat-clearing herbs and blood-activating stasis-resolving herbs based on theory of traditional Chinese medicine

description: Additional file 5. The codes of kNN, SVM, DBN, CNN.
DOI: 10.23729/f6455f02-905b-4bf7-a870-743bd3788bf6
title: SMEAR II Siikaneva 1 wetland eddy covariance

description: This dataset contains time series of turbulent exchange of CH4, CO2, heat and momentum measured at SMEAR II Siikaneva 1 fen site, Ruovesi, Finland, during years 2005–2021.

The data were exported from SMEAR database on the dataset release date. Most recent version of the data are available at https://smear.avaa.csc.fi/.
DOI: 10.6084/m9.figshare.5927716
title: Additional file 1: of Biomechanical evaluation of cervical disc replacement with a novel prosthesis based on the physiological curvature of endplate

description: The original data on the ROM and IDP of the cadaveric cervical specimens. (XLSX 16Â kb)
DOI: 10.6084/m9.figshare.5927716.v1
title: Additional file 1: of Biomechanical evaluation of cervical disc replacement with a novel prosthesis based on the physiological curvature of endplate

description: The original data on the ROM and IDP of the cadaveric cervical specimens. (XLSX 16Â kb)
DOI: 10.6084/m9.figshare.5931199
title: Repeatability of the “flash-replenishment” method in contrast-enhanced ultrasound for the quantitative assessment of hepatic microvascular perfusion

description: This study aimed to evaluate the feasibility and repeatability of the flash-replenishment method in contrast-enhanced ultrasound (CEUS) perfusion imaging and assess quantitatively microvascular perfusion in the liver. Twenty healthy New Zealand rabbits were submitted to CEUS perfusion imaging with continuous intravenous infusion. Using flash-replenishment kinetics, the dynamic process of depletion and refilling of microbubble contrast agent was recorded. The hepatic microvascular perfusion parameters were calculated, including region of interest, peak intensity (PI), area under the curve (AUC), and hepatic artery to vein transit time (HA-HVTT). A consistency test was performed for multiple measurements by the same operator and blind measurements by two different operators. The hepatic perfusion imaging of 3×108 bubbles/min had minimal error and the best imaging effect and repeatability. The variability of the perfusion parameter measured at 3 cm depth under the liver capsule was at a minimum with coefficient of variation of 3.9%. The interclass correlation coefficient (ICC) of measurements taken by the same operator was 0.985, (95% confidence interval, CI=0.927-0.998). Measurements taken by two operators had good consistency and reliability, with the ICC of 0.948 (95%CI=0.853-0.982). The PI and AUC of liver parenchyma after reperfusion were lower than before blocking; and HA-HVTT was significantly longer than before blocking (P&lt;0.05). The flash-replenishment method in CEUS perfusion imaging showed good stability and repeatability, which provide a valuable experimental basis for the quantitative assessment of hepatic microvascular perfusion in clinical practice.
DOI: 10.6084/m9.figshare.5931199.v1
title: Repeatability of the “flash-replenishment” method in contrast-enhanced ultrasound for the quantitative assessment of hepatic microvascular perfusion

description: This study aimed to evaluate the feasibility and repeatability of the flash-replenishment method in contrast-enhanced ultrasound (CEUS) perfusion imaging and assess quantitatively microvascular perfusion in the liver. Twenty healthy New Zealand rabbits were submitted to CEUS perfusion imaging with continuous intravenous infusion. Using flash-replenishment kinetics, the dynamic process of depletion and refilling of microbubble contrast agent was recorded. The hepatic microvascular perfusion parameters were calculated, including region of interest, peak intensity (PI), area under the curve (AUC), and hepatic artery to vein transit time (HA-HVTT). A consistency test was performed for multiple measurements by the same operator and blind measurements by two different operators. The hepatic perfusion imaging of 3×108 bubbles/min had minimal error and the best imaging effect and repeatability. The variability of the perfusion parameter measured at 3 cm depth under the liver capsule was at a minimum with coefficient of variation of 3.9%. The interclass correlation coefficient (ICC) of measurements taken by the same operator was 0.985, (95% confidence interval, CI=0.927-0.998). Measurements taken by two operators had good consistency and reliability, with the ICC of 0.948 (95%CI=0.853-0.982). The PI and AUC of liver parenchyma after reperfusion were lower than before blocking; and HA-HVTT was significantly longer than before blocking (P&lt;0.05). The flash-replenishment method in CEUS perfusion imaging showed good stability and repeatability, which provide a valuable experimental basis for the quantitative assessment of hepatic microvascular perfusion in clinical practice.
DOI: 10.7910/dvn/qqycoq/g2d6i3
title: MSH_19800525_A_0140_B_0300.txt

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title: Kelud_B_0460_V_176515 .txt

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title: Kelud_B_0460_V_241171 .txt

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title: Shinmo3_B_0500_V_05428.txt

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title: Cordon0607_2_B_0500_V_44455.txt

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DOI: 10.7910/dvn/qqycoq/ozor86
title: MSH_19800525_A_0105_B_0540.txt

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DOI: 10.7910/dvn/qqycoq/prpo0o
title: Kelud_B_0460_V_157879 .txt

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title: MSH_19800525_A_0115_B_0880.txt

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title: Kelud_B_0460_V_187916 .txt

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title: Shinmo3_B_0460_V_03938.txt

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title: Kelud_B_0460_V_309114 .txt

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title: Cordon0607_2_B_0500_V_46860.txt

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title: MSH_19800525_A_0035_B_0440.txt

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DOI: 10.7910/dvn/qqycoq/ukbqnl
title: Shinmo3_B_0460_V_05569.txt

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DOI: 10.7910/dvn/qqycoq/uluwni
title: Shinmo3_B_0460_V_08070.txt

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DOI: 10.7910/dvn/qqycoq/wuixon
title: Kelud_B_0460_V_213772 .txt

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DOI: 10.7910/dvn/qqycoq/ynotmy
title: MSH_19800525_A_0030_B_0900.txt

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DOI: 10.7910/dvn/qqycoq/yvpqiv
title: Cordon0607_2_B_0460_V_57391.txt

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title: Shinmo3_B_0460_V_06706.txt

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title: Kelud_B_0460_V_257818 .txt

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title: MSH_19800525_A_0055_B_0580.txt

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title: Kelud_B_0460_V_312458 .txt

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title: Cordon0607_2_B_0500_V_33136.txt

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DOI: 10.7910/dvn/qqycoq/bddelb
title: Shinmo4_B_0460_V_03961.txt

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title: Kelud_B_0460_V_249632 .txt

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title: Shinmo4_B_0460_V_05917.txt

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title: Shinmo4_B_0460_V_05269.txt

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title: Shinmo4_B_0460_V_05493.txt

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title: Cordon0607_2_B_0500_V_64592.txt

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title: Cordon0607_2_B_0500_V_54445.txt

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title: Cordon0607_2_B_0460_V_65436.txt

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title: Cordon0607_2_B_0500_V_71066.txt

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title: Kelud_B_0460_V_144129 .txt

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title: MSH_19800525_A_0090_B_0540.txt

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title: MSH_19800525_A_0095_B_0800.txt

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title: Cordon0607_2_B_0500_V_56427.txt

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title: Kelud_B_0460_V_182309 .txt

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title: Shinmo3_B_0460_V_07974.txt

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title: Shinmo4_B_0500_V_06018.txt

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title: MSH_19800525_A_0120_B_0940.txt

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title: MSH_19800525_A_0050_B_0340.txt

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title: Cordon0607_2_B_0500_V_71835.txt

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title: Kelud_B_0460_V_164322 .txt

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title: MSH_19800525_A_0060_B_0680.txt

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title: Shinmo4_B_0500_V_04395.txt

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title: MSH_19800525_A_0095_B_0380.txt

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title: Kelud_B_0460_V_302326 .txt

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title: MSH_19800525_A_0075_B_0600.txt

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title: MSH_19800525_A_0040_B_0500.txt

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title: Cordon0607_2_B_0460_V_48017.txt

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title: Kelud_B_0460_V_319030 .txt

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title: MSH_19800525_A_0130_B_0480.txt

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