cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20488799
title: Additional file 6 of Microbial functional genes are driven by gradients in sediment stoichiometry, oxygen, and salinity across the Baltic benthic ecosystem

description: Additional file 5: Data S5. SIMPER analysis results of all KEGG KO identifiers for all regions tested against each other. Sheet 1 shows the top 10 output results for each pairwise test, with red text denoting KEGG KO identifiers with a significant dissimilarity between the tested regions (P &lt; 0.05). Sheet 2 shows the group dissimilarity (%) for each region compared to their distance (km) between each other.
DOI: 10.6084/m9.figshare.20488802
title: Additional file 7 of Microbial functional genes are driven by gradients in sediment stoichiometry, oxygen, and salinity across the Baltic benthic ecosystem

description: Additional file 6: Data S6. Full statistical results from the dbRDA analyses in R of the KEGG functional gene data and high-quality MAGs.
DOI: 10.6084/m9.figshare.20488802.v1
title: Additional file 7 of Microbial functional genes are driven by gradients in sediment stoichiometry, oxygen, and salinity across the Baltic benthic ecosystem

description: Additional file 6: Data S6. Full statistical results from the dbRDA analyses in R of the KEGG functional gene data and high-quality MAGs.
DOI: 10.6084/m9.figshare.20488805
title: Additional file 8 of Microbial functional genes are driven by gradients in sediment stoichiometry, oxygen, and salinity across the Baltic benthic ecosystem

description: Additional file 7: Data S7. Pairwise PERMANOVA (9999 permutation) test between regions based on the Bray-Curtis dissimilarity index. The data was tested for the top 10 pathways. The p-values shown are Bonferroni corrected for multiple comparisons.
DOI: 10.6084/m9.figshare.20488805.v1
title: Additional file 8 of Microbial functional genes are driven by gradients in sediment stoichiometry, oxygen, and salinity across the Baltic benthic ecosystem

description: Additional file 7: Data S7. Pairwise PERMANOVA (9999 permutation) test between regions based on the Bray-Curtis dissimilarity index. The data was tested for the top 10 pathways. The p-values shown are Bonferroni corrected for multiple comparisons.
DOI: 10.6084/m9.figshare.20488808
title: Additional file 9 of Microbial functional genes are driven by gradients in sediment stoichiometry, oxygen, and salinity across the Baltic benthic ecosystem

description: Additional file 8: Data S8. Full statistical results from linear model analyses in R of the top 10 KEGG pathways plus abiotic variables (collinear variables removed, see methods for more details). The second shows the results from the linear model analysis of the nrtABCD genes.
DOI: 10.6084/m9.figshare.20488808.v1
title: Additional file 9 of Microbial functional genes are driven by gradients in sediment stoichiometry, oxygen, and salinity across the Baltic benthic ecosystem

description: Additional file 8: Data S8. Full statistical results from linear model analyses in R of the top 10 KEGG pathways plus abiotic variables (collinear variables removed, see methods for more details). The second shows the results from the linear model analysis of the nrtABCD genes.
DOI: 10.5517/ccppkws
title: CCDC 646346: Experimental Crystal Structure Determination

description: Related Article: Cheng-Hui Li, Zhi-Guo Gu, Jing-Lin Zuo, Xiao-Zeng You|2007|Wuji Huaxue Xuebao|23|1582|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.20488761
title: Additional file 14 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 14: Supplemental Table 1. Ingredient and calculated nutrient composition of experimental broiler chicken diets.
DOI: 10.6084/m9.figshare.20488761.v1
title: Additional file 14 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 14: Supplemental Table 1. Ingredient and calculated nutrient composition of experimental broiler chicken diets.
DOI: 10.6084/m9.figshare.20488764
title: Additional file 15 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 15: Supplemental Table 2. Details of Samples and 16S Survey Sequencing Statistics.
DOI: 10.6084/m9.figshare.20488764.v1
title: Additional file 15 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 15: Supplemental Table 2. Details of Samples and 16S Survey Sequencing Statistics.
DOI: 10.6084/m9.figshare.20488770
title: Additional file 17 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 17: Supplemental Table 4. Abundance of Taxa in Cecal Samples Exhibiting Significant Changes in Abundance Across Different Treatments.
DOI: 10.6084/m9.figshare.20488770.v1
title: Additional file 17 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 17: Supplemental Table 4. Abundance of Taxa in Cecal Samples Exhibiting Significant Changes in Abundance Across Different Treatments.
DOI: 10.6084/m9.figshare.20488773
title: Additional file 18 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 18: Supplemental Table 5. Details of Metatranscriptome Sequencing Statistics.
DOI: 10.6084/m9.figshare.20488773.v1
title: Additional file 18 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 18: Supplemental Table 5. Details of Metatranscriptome Sequencing Statistics.
DOI: 10.6084/m9.figshare.20488776
title: Additional file 19 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 19: Supplemental Table 6. List of bacterial transcripts and their relative expression (RPKM) across all samples.
DOI: 10.6084/m9.figshare.20488776.v1
title: Additional file 19 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 19: Supplemental Table 6. List of bacterial transcripts and their relative expression (RPKM) across all samples.
DOI: 10.6084/m9.figshare.20488782
title: Additional file 20 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 20: Supplemental Table 7. Main and Interaction Effects of Diet and AGPs on Gene Expression for Day24 and Day40 Cecal Samples.
DOI: 10.6084/m9.figshare.20488782.v1
title: Additional file 20 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 20: Supplemental Table 7. Main and Interaction Effects of Diet and AGPs on Gene Expression for Day24 and Day40 Cecal Samples.
DOI: 10.6084/m9.figshare.20488785
title: Additional file 21 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 21: Supplemental Table 8. Transcripts expressed in the ceca exhibiting significant differential expression between AGPs and diets.
DOI: 10.6084/m9.figshare.20488785.v1
title: Additional file 21 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 21: Supplemental Table 8. Transcripts expressed in the ceca exhibiting significant differential expression between AGPs and diets.
DOI: 10.6084/m9.figshare.20488791
title: Additional file 22 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 22: Supplemental Table 9. Metabolic pathways enriched in transcripts expressed in the ceca exhibiting significant differential expression between AGPs and diets.
DOI: 10.6084/m9.figshare.20488794
title: Additional file 23 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 23: Supplemental Table 10. Enzymes detected in 73 metatranscriptomic datasets.
DOI: 10.6084/m9.figshare.20488794.v1
title: Additional file 23 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 23: Supplemental Table 10. Enzymes detected in 73 metatranscriptomic datasets.
DOI: 10.6084/m9.figshare.20488791.v1
title: Additional file 22 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 22: Supplemental Table 9. Metabolic pathways enriched in transcripts expressed in the ceca exhibiting significant differential expression between AGPs and diets.
DOI: 10.6084/m9.figshare.20488797
title: Additional file 24 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 24: Supplemental Table 11. List of Abbreviations of Compounds and Enzymes.
DOI: 10.6084/m9.figshare.20488797.v1
title: Additional file 24 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 24: Supplemental Table 11. List of Abbreviations of Compounds and Enzymes.
DOI: 10.6084/m9.figshare.20488800
title: Additional file 25 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 25: Supplemental Table 12. Metabolite profiles of serum samples collected from all 60 birds used in the study. Supplemental Table 12 Metabolite profiles of serum samples collected from all 60 birds used in the study.
DOI: 10.6084/m9.figshare.20488800.v1
title: Additional file 25 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 25: Supplemental Table 12. Metabolite profiles of serum samples collected from all 60 birds used in the study. Supplemental Table 12 Metabolite profiles of serum samples collected from all 60 birds used in the study.
DOI: 10.6084/m9.figshare.20488803
title: Additional file 26 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 26: Supplemental Table 13. Expression of transcripts (RPKM) associated with antimicrobial resistance mechanisms across cecal samples.
DOI: 10.6084/m9.figshare.20488803.v1
title: Additional file 26 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 26: Supplemental Table 13. Expression of transcripts (RPKM) associated with antimicrobial resistance mechanisms across cecal samples.
DOI: 10.6084/m9.figshare.20488806
title: Additional file 27 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 27: Supplemental Table 14. Expression of transcripts (RPKM) associated with antimicrobial resistance mechanisms across jejunum samples.
DOI: 10.6084/m9.figshare.20488806.v1
title: Additional file 27 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure

description: Additional file 27: Supplemental Table 14. Expression of transcripts (RPKM) associated with antimicrobial resistance mechanisms across jejunum samples.
DOI: 10.6084/m9.figshare.20488653
title: suppl.data_blots

description: Western blots probing complex formation between biglycan and LRP6 as well as components of the β-catenin degradation complex.
DOI: 10.6084/m9.figshare.20488653.v1
title: suppl.data_blots

description: Western blots probing complex formation between biglycan and LRP6 as well as components of the β-catenin degradation complex.
DOI: 10.21335/nmdc-1814168447-p1_nleg01
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: P1_NLEG01

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.
DOI: 10.21335/nmdc-1814168447-p7_nleg25_npal16a
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: P7_NLEG25_NPAL16a

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.
DOI: 10.21335/nmdc-1814168447-p7_nleg25_npal16-1
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: P7_NLEG25_NPAL16-1

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.
DOI: 10.21335/nmdc-1814168447-p7_nleg25_npal16-5
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: P7_NLEG25_NPAL16-5

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.
DOI: 10.21335/nmdc-1814168447-p7_nleg25_npal16-2
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: P7_NLEG25_NPAL16-2

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.
DOI: 10.21335/nmdc-1814168447-p7_nleg25_npal16-3
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: P7_NLEG25_NPAL16-3

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.
DOI: 10.21335/nmdc-1814168447-p7_nleg25_npal16-4
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: P7_NLEG25_NPAL16-4

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.
DOI: 10.21335/nmdc-1814168447-nleg26
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: NLEG26

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.
DOI: 10.21335/nmdc-1814168447-nleg27
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: NLEG27

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.
DOI: 10.21335/nmdc-1814168447-nleg28-1
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: NLEG28-1

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.
DOI: 10.21335/nmdc-1814168447-nleg28-2
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: NLEG28-2

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.
DOI: 10.21335/nmdc-1814168447-p8_nleg29-5
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: P8_NLEG29-5

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.
DOI: 10.21335/nmdc-1814168447-p8_nleg29-1
title: CTD data from Nansen Legacy Cruise - Arctic Basin Joint Cruise 2-2 Station: P8_NLEG29-1

description: The main scientific goal of the Nansen Legacy Joint Cruise 2-2 (JC2-2) was to extend the research activities from the northern Barents Sea shelf into the central Arctic Ocean. Specifically, JC2-2 addressed objectives of the work packages Physical drivers (Research Foci 1), Human impact (Research Foci 2) and The living Barents Sea (Research Foci 3) by jointly collecting interdisciplinary samples and data. These data are created from the CTD data published by NMDC for the whole cruise (https://doi.org/10.21335/NMDC-1814168447). The values have not be changed.