cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/4x7-jcg-vew
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q42-6gv-l95
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.7700138.v1
title: LP-UFC 722 CT Scans

description: CT scans of the specimen LP-UFC 722 covering the entire specimen, the neural series, the head and neck and only the head. The scans are in .mcs format to be run on Mimics or similar software.
DOI: 10.3535/kqk-bra-zva
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y7h-qpm-gtr
title: Ena W. Turton, 1831

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28687343.v1
title: El Naturaverso como catalizador de la Metasinergia cultural en el Metaverso

description: <b>El Naturaverso como Catalizador de la Metasinergia Cultural en el Metaverso</b>Este documento explora el concepto del <b>Naturaverso</b> como una extensión del Metaverso, donde la intersección entre lo natural y lo digital facilita una <b>metasinergia cultural</b> sin precedentes. A través de un análisis interdisciplinario, se examina cómo la inmersión en entornos virtuales inspirados en la naturaleza impacta la construcción de identidades, el intercambio cultural y la evolución de comunidades digitales.El estudio parte de la premisa de que el Metaverso no solo replica realidades preexistentes, sino que también es capaz de generar ecosistemas digitales <b>biomiméticos</b>, diseñados para fomentar la sostenibilidad cultural y la innovación social. En este contexto, el Naturaverso emerge como un espacio que no solo imita la naturaleza, sino que incorpora sus principios de organización, resiliencia y diversidad para potenciar la interconectividad y la creatividad en entornos virtuales.Desde un enfoque teórico, el documento analiza la <b>metasinergia cultural</b>, entendida como un proceso de coevolución donde las expresiones culturales, los sistemas de conocimiento y las dinámicas sociales se entrelazan para generar nuevas formas de interacción y significado. Se exploran las implicaciones filosóficas, tecnológicas y económicas de este fenómeno, subrayando su potencial para redefinir el acceso a la cultura, la educación y la construcción de realidades virtuales participativas.A través de un estudio de casos y modelos experimentales, se demuestra cómo la integración del Naturaverso en el Metaverso puede servir como plataforma para la preservación del patrimonio inmaterial, la creación de experiencias sensoriales avanzadas y la reconfiguración de espacios digitales que fomenten la inclusión y la diversidad. Se concluye que este paradigma no solo amplifica el alcance de la cultura digital, sino que también actúa como catalizador de una transformación socio-tecnológica con implicaciones globales.
DOI: 10.6084/m9.figshare.6106892.v1
title: vir2_NCBI_21-03-2018

description: Two fasta sequence datasets downloaded from Genebank nucleotides and Genebank proteins using the Galaxy tool "fetch_fasta_from_ncbi" (https://toolshed.g2.bx.psu.edu/) and the query strings<br>DNA sequences were retrieved on 21-03-2018 using two queries"txid10239[Organism] NOT txid131567[Organism] NOT phage[All Fields] NOT patent[All Fields] NOT chimeric[Title] NOT vector[Title] NOT method[Title] NOT X174[All Fields] AND 301:10000[Sequence length]" and "txid10239[Organism] NOT txid131567[Organism] NOT phage[All Fields] NOT patent[All Fields] NOT chimeric[Title] NOT vector[Title] NOT method[Title] NOT X174[All Fields] AND 10001:1300000[Sequence length]". 301-10000nt long sequences were then subjected to clustering using the galaxy tool vsearch. The resulting centroids were finally merged with the 10001-1300000nt long sequences leading to vir2_NCBI_21-03-2018<br> Protein sequences were retrieved using the query "txid10239[Organism] NOT txid131567[Organism] NOT phage[All Fields] NOT patent[All Fields] NOT chimeric[Title] NOT vector[Title] NOT method[Title] NOT X174[All Fields] AND 30:9000[Sequence length]".
DOI: 10.6084/m9.figshare.7376930.v1
title: the totem tree of objects

description: <i>Images for New Writing article</i><br><i><br></i>
DOI: 10.17632/x9kdb34f9d
title: Feynman graph generation and calculations in the Hopf algebra of Feynman graphs

description: Title of program: <b>feyngen, feyncop</b> Catalogue Id: AEUB_v1_0 Nature of problem Performing explicit calculations in quantum field theory Feynman graphs are indispensable. Infinities arising in the perturbative calculations make renormalization necessary. On a combinatorial level renormalization can be encoded using a Hopf algebra [2] whose coproduct incorporates the BPHZ procedure. Upcoming techniques initiated an interest in relatively large loop order Feynman diagrams which are not accessible by traditional tools. Versions of this program held in the CPC repository in Mendeley Data AEUB_v1_0; <b>feyngen, feyncop</b>; 10.1016/j.cpc.2014.07.023 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/yc4trf7tyr
title: Green Business Research Dataset (1990-2019)

description: The green business reseach and publication dataset, which was indexed by Scopus from 1990 to 2019. The dataset contains data authors, authors ID Scopus, title, year, source title, volume, issue, article number in Scopus, DOI, link, affiliation, abstract, index keywords, references, Correspondence Address, editors, publisher, conference name, conference date, conference code, ISSN, language, document type, access type, and EID.
DOI: 10.3535/1q4-8yx-mnb
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ag7-ky0-fz4
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11988042.v3
title: The parameters of stereological analyses.

description: This tables are supplemental data of the the paper titled "Actions of peripubertal gonadal steroids in the formation of sexually dimorphic brain regions in mice".
DOI: 10.6084/m9.figshare.17072960.v1
title: PKG21

description: PKG21 CSV files.
DOI: 10.17632/x6sv8zrjsv
title: TEX264 drives selective autophagy of DNA lesions to promote DNA repair and cell survival

description: Main raw data produced for the generation of the publication by Lascaux et al 2024 Cell doi: 10.1016/J.CELL.2024.08.020
LysoIP-Seq and WGS datasets are deposited to NCBI: GSE242298 and SRA: PRJNA1127335. The mass spectrometry proteomics data is deposited to the ProteomeXchange Consortium, PRIDE: PXD046037. The FOCUS transcriptome is publicly available in GEO under accession number NCBI: GSE156915. Any additional information required to reanalyse the data reported in this paper is available from the lead contact upon request.
DOI: 10.3535/n8c-k0g-pe4
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z2v-z2k-zfc
title: †Retzia King, 1850

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14411084.v1
title: S8 File. MOA earshoot COVERAGE rep1 bigwig file for B73v5.

description: Read-normalized coverage from combined bio-replicate 1 libraries of earshoot MOA-seq aligned to B73v5 in 20 bp window bins.
DOI: 10.6084/m9.figshare.14556270.v3
title: S1 Supporting Information.docx

description: The data includes the locations of the fossilized root systems belonging to Archaeopteris, Eospermatopteris and Lycopsid trees, as well as drill-core extracts, and paleosol surface features such as pseudoanticlines. The fossils locations were recorded using Stein's map (Stein et al, 2020) for sake of consistency with previous studies at this site. Some general size attributes of the fossils are also provided. The data collected in the field using 5*5 inches grid system.
DOI: 10.6084/m9.figshare.9255761.v2
title: luad_tcga_cohorts_isotype_median_values

description: This table contains median values of CD19, IGH, IGG1, IGHA, IGHG4, IGG1/IGH, IGHA/IGH, IGG4/IGH, IGH/MS4A1, IGHG1/MS4A1, IGHA/MS4A1, IGHG4/MS4A1 expression, IGHG1 clonality and IGHA clonality in lung adenocarcinoma TCGA cohorts from our study (KRAS mutated (mut), KRAS wild-type (WT), EGFR mut, STK11 mut, STK11 WT, TP53 mut, TP53 WT, PDL1 high, PDL1 low, proximal proliferative subtype, proximal inflammatory subtype, terminal respiratory unit subtype).
DOI: 10.3535/4sm-y91-glk
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lq3-pnr-kg1
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11933313.v1
title: Corporate (Board Interconnectivity Data)

description: An XML file resultant from research on social networks formed via corporate board membership. "Explorable" data using visualization tools such as Cytoscape. <br><br>Collected from open data sources via automated programs using data produced and processed from sources believed to be reliable; no warranty, expressed or implied, is made regarding accuracy, adequacy, completeness, legality, reliability or usefulness of any information. This disclaimer applies to both isolated and aggregate uses of the information. The information is provided on an "as is" basis.
DOI: 10.6084/m9.figshare.12950798.v1
title: Data for Fig. 2

description: Data for Fig. 2
DOI: 10.60893/figshare.jap.25043762.v1
title: Structure files and spreadsheet of properties

description: The supplemental material contains structure files used in this work and a spreadsheet of properties referenced in the figures of the manuscript. For more instruction, please view the README file contained in the supplemental material.
DOI: 10.17632/g4d6wkjghk
title: IN VITRO EVALUATION OF SURFACE CLEANING METHODS IN TWO DIFFERENT IMPLANT DEFECT ANGULATIONS: A PILOT STUDY

description: Recently, prominence has been given to the use of power abrasive devices to improve the cleaning effectiveness on contaminated implant surfaces, and in an in-vitro study, it has been stated that air powder abrasion is the most efficient and less damaging cleaning modality in comparison to sonic scaler and curette for different defect morphologies15. However, there is a paucity of information on the use of air powder abrasive devices to reach a definite conclusion and it is warranted to perform comparative study designs evaluating the effectiveness. There is a new air-abrasive material called trehalose, a natural noncariogenic disaccharide with a good taste. It is thermostable and approved for use in food processing16. It is highly water-soluble (689g/L) with a pH of 6.4. In one clinical study, subgingival air-polishing with trehalose powder has revealed encouraging clinical outcomes17. Therefore, the aim of this study is to investigate the cleaning potential of an air abrasive device with trehalose powder on implant surfaces in comparison to Er: YAG laser application in an in-vitro model of two different defect angulations.
DOI: 10.3535/1k2-ssg-678
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/map-pkz-jmk
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/2m74kh2m2y
title: Alternative Polyadenylation Determines the Functional Landscape of Inverted Alu Repeats. Ku et al.

description: Inverted Alu repeats (IRAlus) are abundantly found in the transcriptome, especially in introns and 3′ UTRs. Yet, the biological significance of IRAlus embedded in 3′ UTRs remains largely unknown. Here, we find that 3′ UTR IRAlus silence genes involved in essential signaling pathways. We utilize J2 antibody to directly capture and map the double-stranded RNA structure of 3′ UTR IRAlus in the transcriptome. Bioinformatic analysis reveals alternative polyadenylation as a major axis of IRAlus-mediated gene regulation. Notably, the expression of mouse double minute 2 (MDM2), an inhibitor of p53, is upregulated by the exclusion of IRAlus during UTR shortening, which is exploited to silence p53 during tumorigenesis. Moreover, the transcriptome-wide UTR lengthening in neural progenitor cells results in the global downregulation of genes associated with neurodegenerative diseases, including amyotrophic lateral sclerosis, via IRAlus inclusion. Our study establishes the functional landscape of 3′ UTR IRAlus and its role in human pathophysiology.
DOI: 10.3535/js8-wg0-c5x
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sp8-2ka-985
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.6071663.v1
title: StackOverflow questions requiring the invocation of a single Java method

description: The dataset pairs natural language commads extracted from StackOverflow questions, with the corresponding Java methods.<br>The dataset is made available in the tsv format.<br>The first column contains a natural language command, while the other columns list the corresponding Java methods.<br>The dataset has been generated by retrieving the most popular questions about the Java programming language, which have been manually filtered to select only the top 122 questions that can be answered with the invocation of a single method from OpenJDK. Next, the dataset has been further manually enriched with missing relevant methods.<br><br>The dataset contains a total of 122 records. More precisely, we have:- 100 questions paired with 1 relevant method;- 20 questions paired with 2 relevant methods;- 1 question paired with 3 relevant methods;- 1 question paired with 4 relevant methods.<br>
DOI: 10.17632/s2kzmf5fjw
title: Early pregnancy serum exosomes miRNAs gene-targets vary based on pancreatic β-cell function in GDM

description: Genes regulated by the miRNA set differentially expressed in maternal or placental serum exosomes in women who will develop GDM based on early pregnancy HOMA-% β index status. 
Differential expression of miRNA profiles among study subgroups using Affymetrix Transcriptome Analysis Console (TAC) Software version 4.0.1 (Affymetrix, Applied Biosystems). The results were preprocessed at RMA+DABG-NONORM-Human-only setting. The t-test, Multiple Testing Corrections, and False Discovery Rate Prediction were used for this purpose. Those genes with an FDR-adjusted p-value less than 0.05 demonstrated at least a 2-fold difference between the control group and the contrast subgroups were considered statistically significant and differentially expressed. Microarray data have been deposited in the Gene Expression Omnibus (GEO) database with accession number GSE243374. 
Once the DEmiRNAs were identified for each subgroup, target gene prediction for each DEmiRNA identified was performed using TargetScanHuman 8.0 database (20). TargetScanHuman’s cumulative weighted context score (CWCS) of -0.7 or lower was used as a confidence level filter for miRNA targeting. Each CWCS indicates that a microRNA represses a certain mRNA target by at least 38% as compared to the normal baseline level. Once the target genes were identified, gene expression data analysis was performed using ExpressAnalyst (https://www.expressanalyst.ca). Gene expression statistical and functional global enrichment networks using the Kyoto Encyclopedia of Genes and Genomes (KEGG) database were generated for each comparison condition between the control and the contrast subgroups. KEGG 2021 Human Pathway analysis were performed using the Enrichr platform. 

Table S1. Genes regulated by the miRNA set differentially expressed in maternal serum exosomes in women who will develop GDM with a high HOMA-% β index
Table S2. Genes regulated by the miRNA set differentially expressed in maternal serum exosomes in women who will develop GDM with a low HOMA-% β index
Table S3. Genes regulated by hsa-miR-6724-5p present in maternal serum exosomes in women who will develop GDM regardless of their HOMA-% β index
Table S4. Genes regulated by the miRNA set differentially expressed in placental serum exosomes in women who will develop GDM with a high HOMA-% β index
Table S5. Genes regulated by the miRNA set differentially expressed in placental serum exosomes in women who will develop GDM with a low HOMA-% β index
Table S6. Genes regulated by hsa-miR-3665 identified in placental serum exosomes in women who will develop GDM regardless of their HOMA-% β index
DOI: 10.3535/5d7-qe1-0cq
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qwb-mmt-kp3
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/bcnvkv8bx6
title: Reviewers' List of the Journal of Advanced Signal Processing 

description: List of Reviewers of the Biannual Journal of Advanced Signal Processing (JASP)
DOI: 10.17632/wy9g8fsm9j
title: Field and field gradient integrals based on Gaussian type orbitals

description: Title of program: FGRAD Catalogue Id: ABYC_v1_0 Nature of problem The function subprogram FGRAD with associated subroutines FGAMA and FTABL computes the field gradient integral based on combined or contracted gaussian-type orbitals (CGTO). Versions of this program held in the CPC repository in Mendeley Data ABYC_v1_0; FGRAD; 10.1016/0010-4655(72)90060-4 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.3535/4ww-de9-0sy
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28586501.v1
title: 表 S1

description: 补充表 1.通过 LC-MS/MS 分析金黄色葡萄球菌裂解物中 GST-PHB2mMTS 相关免疫沉淀物鉴定的蛋白质。
DOI: 10.17632/fwsrc43d7d
title: Data for: Assessing the alignment of national-level adaptation plans to the Paris Agreement

description: An assessment of 54 National Adaptation Plans or Strategies, based on criteria developed from Article 7 of the Paris Agreement. The scoring system was based on Preston et al. (2011) and was used to develop specific qualitative scoring for each criteria (see Table S1 for more detail). The spreadsheet contains a sheet for each plan and the score for each criteria, with evidence provided for each score (e.g., quotations from plans, description of elements included/excluded.
DOI: 10.3535/g7c-fmq-vtn
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zr5-az9-dzn
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5wy-pn9-3rv
title: Cochlicopa lubrica (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/brj-11w-wey
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/mg6hf878mv
title: Data for: Trust or social preferences? A cross-cultural experiment.

description: Data set from economic games
DOI: 10.3535/ptc-rf3-jb6
title: Bathyomphalus contortus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xlk-1p3-w2m
title: Valvata cristata O. F. Müller, 1774

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16895995.v1
title: January 2021 Covid-19 + Vaccines Twitter Streaming Dataset

description: The file contains Tweet IDs* for COVID-19 related tweets collected in <b>January, 2021</b> from <b>Twitter's COVID-19 Streaming Endpoint </b>via a custom script developed by the <b>Social Media Lab (https://socialmedialab.ca/)</b>.<br>Visit <b>our interactive dashboard at https://stream.covid19misinfo.org</b>/ for a preview and some general stats about this COVID-19 Twitter streaming dataset.<br>For more info about <b>Twitter's COVID-19 Streaming Endpoint</b>, visit <b>https://developer.twitter.com/en/docs/labs/covid19-stream/overview</b><br><b>Note</b>: In accordance with Twitter API Terms, the dataset only includes Tweet IDs (as opposed to the actual tweets and associated metadata). To recollect tweets contained in this dataset, you can use programs such as Hydrator (https://github.com/DocNow/hydrator/) or the Python library Twarc (https://github.com/DocNow/twarc/).
DOI: 10.17632/fgpk324frt
title: Data for: The influence of carbonate precipitation on riverine magnesium isotope signals: new constrains from Jinsha River Basin, Southeast Tibetan Plateau

description: The tables list the major elemental concentration and Mg isotope composition of river water and suspended load in Jinsha River Basin.
DOI: 10.3535/mfl-l29-693
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qlw-6s8-j8w
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mm1-vw7-rm8
title: Phaulactis? sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ytq-n13-3ey
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22771034.v1
title: GDF15 and the Neonatal Lung

description: This data has supplemental data of gene expression and other data supporting our manuscript
DOI: 10.6084/m9.figshare.28646687.v1
title: ChinaCP-小麦10m

description: ChinaCP-Wheat10m： 中国 10 m 全国规模小麦种植格局分布图
DOI: 10.3535/clk-qdf-m5d
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gar-amy-8d2
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13335986.v1
title: Comparing Ideal Family Size with Total Fertility Rates - DHS (Since 2010) and OECD Family Database

description: Comparison of fertility rates and ideal family sizes (as given by females) from sample of DHS/MICS countries (since 2010) and from OECD Family Database.
DOI: 10.3535/epr-rpc-6ka
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s65-rn0-581
title: Equus (Equus) caballus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2mt-ccv-39l
title: †Cymbularia Koken, 1896

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8xf-65s-v6a
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26343493.v1
title: ECS24-0408_OpenDataFiles_Persad

description: Open Data files for paper entitled "Home range size, habitat selection, and mycophagy of sympatric North American flying squirrels"