cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.nys2sm
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_0_GID","value":"ARG","matchCase":false},{"type":"equals","key":"GADM_LEVEL_1_GID","value":"ARG.3_1","matchCase":false},{"type":"equals","key":"GADM_LEVEL_2_GID","value":"ARG.3.5_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060388-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5mw3ez
title: Occurrence Download

description: A dataset containing 9848 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Grindelia hirsutula",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9848 records from 136 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060389-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17843521
title: Dataset generated with preference-based EMOAs: g-NSGA-II,  ĝ-NSGA-II, WASF-GA and ϵ-g-NSGA-II

description: This repository contains quantitative data obtained with preference-based EMOAs: g-NSGA-II, ĝ-NSGA-II, WASF-GA, and ϵ-g-NSGA-II on the ZDT1 test problem, the ZDT3 test problem, the Viennet test problem and a Safety problem. Four different reference points were used in each problem.
DOI: 10.5281/zenodo.17843520
title: Dataset generated with preference-based EMOAs: g-NSGA-II,  ĝ-NSGA-II, WASF-GA and ϵ-g-NSGA-II

description: This repository contains quantitative data obtained with preference-based EMOAs: g-NSGA-II, ĝ-NSGA-II, WASF-GA, and ϵ-g-NSGA-II on the ZDT1 test problem, the ZDT3 test problem, the Viennet test problem and a Safety problem. Four different reference points were used in each problem.
DOI: 10.4121/efa64223-ba51-48fa-91be-53f0e48460b4
title: Multi-Sensor Running Dataset: IMU, Heart Rate, and GPS Data from 12 Runners across Three Training Sessions

description: This dataset contains data collected from 12 participants running with seven inertial measurement units (IMUs) located on the lower legs, upper legs, pelvis, sternum, and wrist (underneath the watch), as well as a heart rate monitor and GPS watch, across three typical training sessions. The running protocols were performed on different days and consisted of an endurance run (END), an interval run (INT), and a 5 km sub-maximal effort (5K). Data were used to support the findings of two articles [1] and [2]. Before starting the running protocol, participants performed five forward hip bends (good mornings), five squats, and five knee flexion/extension movements (left and right; hip at 90 degrees flexion). A detailed explanation of the measurement protocol and equipment is provided in references [1] and [2]. Data collection took place between November 2023 and January 2024. A readme file is included that explains the data and to reproduce analyses.<br>[1] Scheltinga, B. L., Buurke, J. H., Kok, J. N., & Reenalda, J. (2025). Repeatability of Vertical Ground Reaction Force Estimation During Running on the Athletics Track on 3 Different Days. Journal of Applied Biomechanics, 1–12.[2] Scheltinga, B. L., Buurke, J. H., Kok, J. N., & Reenalda, J. 'Do Training Load Metrics Agree? A Comparison of Session Perceived Exertion, Physiological and Biomechanical Load in Outdoor Running. Sports Medicine Open.
DOI: 10.18710/pujou2/r2vrjn
title: images.zip
DOI: 10.18710/pujou2/gzcyuw
title: masks.zip
DOI: 10.18710/pujou2/n2sfej
title: 00_README.txt
DOI: 10.18710/pujou2
title: Replication refined dataset for: A lightweight and extensible cell segmentation and classification model for H&E-stained cancer whole slide images

description: &lt;p&gt;The refined PanNuke and MoNuSAC Cell Segmentation and Classification Dataset is a unified collection of H&amp;E-stained image patches with cell instance annotations and seven cell-type labels. It is created by combining the PanNuke and MoNuSAC datasets while improving label granularity and consistency across both sources.&lt;/p&gt;

&lt;p&gt;The dataset is generated using a cross-relabeling workflow that refines broad or ambiguous classes in each dataset using two ResNet50-based cell classifiers trained on extracted single-cell crops. A classifier trained on MoNuSAC immune cells is used to split the PanNuke inflammatory class into lymphocytes, neutrophils, and macrophages. A classifier trained on PanNuke epithelial subclasses is used to split the MoNuSAC epithelial class into epithelial (benign) and neoplastic (malignant). The relabeled instances are merged with the remaining original classes to form a single dataset with harmonized labels.&lt;/p&gt;

&lt;p&gt;The resulting refined dataset includes seven cell types with the following instance counts: neoplastic 105,451; epithelial 29,926; lymphocytes 65,275; neutrophils 3,833; macrophages 3,410; connective 50,585; dead 2,908.&lt;/p&gt;
description: Python, 3.12.7
description: Numpy, 1.26.4
description: opencv-python, 4.10.0
DOI: 10.17026/ar/8l3vmu
title: PAN-00178313 - terra sigillata kom type Drag. 37 (EG)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00178313&lt;/p&gt;
description: Modified: 2025-11-17T12:30:40+01:00
DOI: 10.6084/m9.figshare.30631163.v1
title: Characteristics of prognostic non-apoptotic programmed cell death LncRNAs correlates with immune status and therapeutic responses to pancreatic cancer

description: In this study, we established a classification system based on the expression profile of non-apoptotic programmed cell death (PCD)-related long non-coding RNAs (lncRNAs) to investigate the features of prognostic non-apoptotic PCD-related lncRNAs in pancreatic adenocarcinoma (PAAD). Additionally, the relationship between this model and the characteristics of PAAD (clinical features, tumor stemness, epigenetic alterations, immune status, and drug sensitivity) was identified. The Cancer Genome Atlas (TCGA) was employed to retrieve clinical information and transcriptome sequencing data for patients with PAAD. Non-apoptotic PCD-related genes were obtained from the related databases and published literature. In our study, 272 differentially expressed lncRNAs related to non-apoptotic PCD were screened, and 91 differentially expressed lncRNAs related to non-apoptotic PCD were significantly correlated with overall survival (OS). A predictive model containing five non-apoptotic PCD-related lncRNAs was constructed using Cox regression analysis and the least absolute shrinkage and selection operator (LASSO) regression analysis. Patients were classified as high-risk and low-risk based on the predictive model. Our prognostic model was strongly associated with tumor stemness, epigenetic alterations, immune status, and response to chemotherapeutic drugs. A signature of lncRNAs involved in non-apoptotic PCD can help predict the prognosis of patients with PAAD and discover promising treatments for PAAD.
DOI: 10.6084/m9.figshare.30631163
title: Characteristics of prognostic non-apoptotic programmed cell death LncRNAs correlates with immune status and therapeutic responses to pancreatic cancer

description: In this study, we established a classification system based on the expression profile of non-apoptotic programmed cell death (PCD)-related long non-coding RNAs (lncRNAs) to investigate the features of prognostic non-apoptotic PCD-related lncRNAs in pancreatic adenocarcinoma (PAAD). Additionally, the relationship between this model and the characteristics of PAAD (clinical features, tumor stemness, epigenetic alterations, immune status, and drug sensitivity) was identified. The Cancer Genome Atlas (TCGA) was employed to retrieve clinical information and transcriptome sequencing data for patients with PAAD. Non-apoptotic PCD-related genes were obtained from the related databases and published literature. In our study, 272 differentially expressed lncRNAs related to non-apoptotic PCD were screened, and 91 differentially expressed lncRNAs related to non-apoptotic PCD were significantly correlated with overall survival (OS). A predictive model containing five non-apoptotic PCD-related lncRNAs was constructed using Cox regression analysis and the least absolute shrinkage and selection operator (LASSO) regression analysis. Patients were classified as high-risk and low-risk based on the predictive model. Our prognostic model was strongly associated with tumor stemness, epigenetic alterations, immune status, and response to chemotherapeutic drugs. A signature of lncRNAs involved in non-apoptotic PCD can help predict the prognosis of patients with PAAD and discover promising treatments for PAAD.
DOI: 10.6084/m9.figshare.28720850
title: Mitochondrial DNA depletion promotes vasculogenic properties through mesenchymal alteration in glioblastoma

description: Glioblastoma, the most aggressive brain tumour with high and heterogenic vascularity, frequently courses with mtDNA depletion. However, the effects of mtDNA depletion on mesenchymal characteristics responsible for aggressiveness and vasculogenic mimicry in glioblastoma, have not been thoroughly revealed. We aimed to investigate the effects of mtDNA depletion on EMT and vasculogenic properties in glioblastoma. mtDNA depletion was induced by low-dose ethidium bromide and then its effects on EMT and related vascular changes were analyzed. Mesenchymal and endothelial markers were analyzed by qRT-PCR and flow cytometry. Vasculogenic properties were determined through the Matrigel angiogenesis assay, periodic acid-Schiff (PAS) staining and the endothelial differentiation assay. SLUG gene, a key EMT regulator, was downregulated using RNA interference to confirm the contribution of EMT in vasculogenesis. mtDNA depletion increased mesenchymal markers, subsequent vasculogenic properties and aggressive phenotype. These were reversed by downregulating SLUG. The novel linkage between mtDNA depletion and accelerated vasculogenesis after EMT was demonstrated.
DOI: 10.6084/m9.figshare.28720850.v3
title: Mitochondrial DNA depletion promotes vasculogenic properties through mesenchymal alteration in glioblastoma

description: Glioblastoma, the most aggressive brain tumour with high and heterogenic vascularity, frequently courses with mtDNA depletion. However, the effects of mtDNA depletion on mesenchymal characteristics responsible for aggressiveness and vasculogenic mimicry in glioblastoma, have not been thoroughly revealed. We aimed to investigate the effects of mtDNA depletion on EMT and vasculogenic properties in glioblastoma. mtDNA depletion was induced by low-dose ethidium bromide and then its effects on EMT and related vascular changes were analyzed. Mesenchymal and endothelial markers were analyzed by qRT-PCR and flow cytometry. Vasculogenic properties were determined through the Matrigel angiogenesis assay, periodic acid-Schiff (PAS) staining and the endothelial differentiation assay. SLUG gene, a key EMT regulator, was downregulated using RNA interference to confirm the contribution of EMT in vasculogenesis. mtDNA depletion increased mesenchymal markers, subsequent vasculogenic properties and aggressive phenotype. These were reversed by downregulating SLUG. The novel linkage between mtDNA depletion and accelerated vasculogenesis after EMT was demonstrated.
DOI: 10.6084/m9.figshare.28545301
title: Integrated microarray analysis of HPV of <i>Mus musculus</i> revealed the proteasome subunit beta type 6 gene as a potential biomarker

description: HPV is responsible for approximately 90% of the infection-attributable cancer cases worldwide. This study identifies potential biomarkers for HPV to design drugs for its treatment. Microarray analysis of HPV-infected datasets subjected to enrichment analysis revealed HPV's impact on organic substance transport, T-cell activation, DNA binding, receptor–ligand activity, and cellular location at the plasma membrane's neurone projection, axon and cytoplasmic side. PPI and network analysis brought the Psmb6 gene as a prospective biomarker. During enrichment analysis, psmb6 screened against Drug Matrix DB showed few competent drugs among then beta-estradiol-3-benzoalte and alprazolam found to have a better binding affinity with psmb6 in docking through Autodock. Further elucidation of these two complexes exhibited less RMSD and substantial protein–ligand contacts in MD simulations performed by Desmond. Based on the results, psmb6 acts as a biomarker for HPV infection, and existing drugs beta-estradiol-3-benzoalte and alprazolam as potential candidates need to be designed for future research studies aimed at combating HPV infection.
DOI: 10.6084/m9.figshare.28545301.v1
title: Integrated microarray analysis of HPV of <i>Mus musculus</i> revealed the proteasome subunit beta type 6 gene as a potential biomarker

description: HPV is responsible for approximately 90% of the infection-attributable cancer cases worldwide. This study identifies potential biomarkers for HPV to design drugs for its treatment. Microarray analysis of HPV-infected datasets subjected to enrichment analysis revealed HPV's impact on organic substance transport, T-cell activation, DNA binding, receptor–ligand activity, and cellular location at the plasma membrane's neurone projection, axon and cytoplasmic side. PPI and network analysis brought the Psmb6 gene as a prospective biomarker. During enrichment analysis, psmb6 screened against Drug Matrix DB showed few competent drugs among then beta-estradiol-3-benzoalte and alprazolam found to have a better binding affinity with psmb6 in docking through Autodock. Further elucidation of these two complexes exhibited less RMSD and substantial protein–ligand contacts in MD simulations performed by Desmond. Based on the results, psmb6 acts as a biomarker for HPV infection, and existing drugs beta-estradiol-3-benzoalte and alprazolam as potential candidates need to be designed for future research studies aimed at combating HPV infection.
DOI: 10.4121/efa64223-ba51-48fa-91be-53f0e48460b4.v1
title: Multi-Sensor Running Dataset: IMU, Heart Rate, and GPS Data from 12 Runners across Three Training Sessions

description: This dataset contains data collected from 12 participants running with seven inertial measurement units (IMUs) located on the lower legs, upper legs, pelvis, sternum, and wrist (underneath the watch), as well as a heart rate monitor and GPS watch, across three typical training sessions. The running protocols were performed on different days and consisted of an endurance run (END), an interval run (INT), and a 5 km sub-maximal effort (5K). Data were used to support the findings of two articles [1] and [2]. Before starting the running protocol, participants performed five forward hip bends (good mornings), five squats, and five knee flexion/extension movements (left and right; hip at 90 degrees flexion). A detailed explanation of the measurement protocol and equipment is provided in references [1] and [2]. Data collection took place between November 2023 and January 2024. A readme file is included that explains the data and to reproduce analyses.<br>[1] Scheltinga, B. L., Buurke, J. H., Kok, J. N., & Reenalda, J. (2025). Repeatability of Vertical Ground Reaction Force Estimation During Running on the Athletics Track on 3 Different Days. Journal of Applied Biomechanics, 1–12.[2] Scheltinga, B. L., Buurke, J. H., Kok, J. N., & Reenalda, J. 'Do Training Load Metrics Agree? A Comparison of Session Perceived Exertion, Physiological and Biomechanical Load in Outdoor Running. Sports Medicine Open.
DOI: 10.15468/dl.xfzzx9
title: Occurrence Download

description: A dataset containing 24749 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dicranum scoparium",
 "Year 2010-2025"
 ]
}

 The dataset includes 24749 records from 201 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060390-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.835vce
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_0_GID","value":"ARG","matchCase":false},{"type":"equals","key":"GADM_LEVEL_1_GID","value":"ARG.3_1","matchCase":false},{"type":"equals","key":"GADM_LEVEL_2_GID","value":"ARG.3.6_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060391-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tdfg9t
title: Occurrence Download

description: A dataset containing 208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hakea commutata",
 "HasCoordinate is true"
 ]
}

 The dataset includes 208 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060392-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17986878
title: Territorial information to analize crop and livestock disconnection_reconnection in some world regions

description: This dataset contains information on regions in Spain, France, China, and the USA, used to create spatial maps illustrating crop–livestock disconnection at the county or provincial scale. It was developed as part of the collaboration for the Special Issue Reducing Nitrogen Waste Through Crop and Livestock Reconnection, edited by Luis Lassaletta, Alberto Sanz-Cobeña, Lin Ma, Sheri Spiegal, Corentin Pinsard, Pytrik Reidsma (†), and Val Snow.

URL: https://www.sciencedirect.com/special-issue/109JMKF1W5D

The four datasets included here were used to characterize systems and analyze crop–livestock disconnection in Spain, France, China, and the USA. This work is the result of collaboration among: Luis Lassaletta, Corentin Pinsard, Lin Ma, Sheri Spiegal, Pytrik Reidsma (†), Zhahoai Bai, Alfredo Rodríguez, Val Snow, and Alberto Sanz-Cobeña (19-Dec-2025).

AcknowledgementsAgrosceNa-NEXT PID2023-152562OB-I00.  (Funded by MCIU /AEI /10.13039/5011000110331 FEDER, UE). Spain. EUPresident’s International Fellowship Initiative (PIFI) of the Chinese Academy of Sciences (2021VCA0012)National Natural Science Foundation of China (W2412125)New Innovator Award from the Foundation for Food and Agricultural Research USA (22-000103)
DOI: 10.5281/zenodo.17979852
title: Territorial information to analize crop and livestock disconnection_reconnection in some world regions

description: This dataset contains information on regions in Spain, France, China, and the USA, used to create spatial maps illustrating crop–livestock disconnection at the county or provincial scale. It was developed as part of the collaboration for the Special Issue Reducing Nitrogen Waste Through Crop and Livestock Reconnection, edited by Luis Lassaletta, Alberto Sanz-Cobeña, Lin Ma, Sheri Spiegal, Corentin Pinsard, Pytrik Reidsma (†), and Val Snow.

URL: https://www.sciencedirect.com/special-issue/109JMKF1W5D

The four datasets included here were used to characterize systems and analyze crop–livestock disconnection in Spain, France, China, and the USA. This work is the result of collaboration among: Luis Lassaletta, Corentin Pinsard, Lin Ma, Sheri Spiegal, Pytrik Reidsma (†), Zhahoai Bai, Alfredo Rodríguez, Val Snow, and Alberto Sanz-Cobeña (19-Dec-2025).

AcknowledgementsAgrosceNa-NEXT PID2023-152562OB-I00.  (Funded by MCIU /AEI /10.13039/5011000110331 FEDER, UE). Spain. EUPresident’s International Fellowship Initiative (PIFI) of the Chinese Academy of Sciences (2021VCA0012)National Natural Science Foundation of China (W2412125)New Innovator Award from the Foundation for Food and Agricultural Research USA (22-000103)
DOI: 10.6084/m9.figshare.30919913
title: The Impact of Game Sense on Football Referee Performance

description: This is the Doctus KBS database of our research.
DOI: 10.6084/m9.figshare.30919913.v1
title: The Impact of Game Sense on Football Referee Performance

description: This is the Doctus KBS database of our research.
DOI: 10.15468/dl.rxzbu4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_0_GID","value":"ARG","matchCase":false},{"type":"equals","key":"GADM_LEVEL_1_GID","value":"ARG.3_1","matchCase":false},{"type":"equals","key":"GADM_LEVEL_2_GID","value":"ARG.3.7_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060393-251120083545085/datasets/export for details.
DOI: 10.15468/dl.7gep67
title: Occurrence Download

description: A dataset containing 337 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hakea corymbosa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 337 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060394-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.