cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22316440.v1
title: Global spatially explicit carbon emissions from land-use change 1961-2020

description: yyyy_yyyy_mean_net_setnull: the spatial distribution of the 10-yr averaged <em>E</em><sub>LUC</sub> over different time periods (T C yr<sup>-1</sup>); luc_*_mean_1961_2020_setnull: spatial distribution of the LUC induced carbon fluxes during 1961-2020 (T C yr<sup>-1</sup>), for gross sources (emission), gross sinks (sink) and net emissions(net). <br> This dataset supports the publication: Qin Z. et al. 2023, Global spatially explicit carbon emissions from land-use change over the past six decades (1961-2020). <br>
DOI: 10.6084/m9.figshare.6151196.v2
title: Bill measurements of hummingbirds in the network database

description: Here you will find the bill measurements of 157 hummingbird species. This is the set of species present in the network database that describes the interactions between these hummingbirds and their nectar resources (Dalsgaard et al. 2011, Martin-Gonzalez et al. 2015, Maruyama et al. submitted). Detailed information about the measurements can be found at the enclosed documents.
DOI: 10.6084/m9.figshare.8063738.v1
title: Dataset - Gambler's fallacy - Matarazzo et al..sav

description: Dataset of the study "<b> The gambler’s fallacy in problem and non-problem gamblers".</b>
DOI: 10.6084/m9.figshare.12536660.v1
title: JVASP-28218 to JVASP-29112

description: JARVIS-DFT input/output files
DOI: 10.6084/m9.figshare.11637036.v1
title: Human fetal brain expression SNP-weights for use in TWAS

description: Single nucleotide polymorphism (SNP)-weights for Ensembl gene and transcript-level expression were derived from genotyping and RNA sequencing data from 120 human fetal brains aged 12 – 19 post-conception weeks. Prior to deriving SNP-weights, gene- and transcript-level expression data were normalized and adjusted for sex, age, RIN, sequencing batch, 3 genotype principal components and 10 PEER factors. For a full description of the sample and data generation, please see: https://genomebiology.biomedcentral.com/articles/10.1186/s13059-018-1567-1Expression weights for use in transcriptome-wide association studies (TWAS) were derived using FUSION software (http://gusevlab.org/projects/fusion/#computing-your-own-functional-weights). SNP-weights were only generated for genes and transcripts with significant evidence of <i>cis</i>-heritable expression at the default <i>P</i>-value (<i>P</i> &lt; 0.01) in FUSION (1351 Ensembl genes and 3985 Ensembl transcripts). Note that the number of genes that will be testable by TWAS may differ as this will depend on the number of overlapping SNPs between the weights files and the GWAS summary statistics.<br>Expression weights were derived using only SNPs available in the FUSION LD reference (HapMap3 SNPs), in line with the FUSION protocol. Expression weights provided here are in the same format as weights downloaded from the FUSION website.<br>Use of these expression weights to perform TWAS of attention deficit hyperactivity disorder (ADHD), autism spectrum disorder, bipolar disorder, major depressive disorder and schizophrenia are described in Hall et al. '<i>Cis</i>-effects on gene expression in the human prenatal brain associated with genetic risk for neuropsychiatric disorders' <i>Molecular Psychiatry </i>(in press).<br>Files:- Ensembl gene level weights: op-fusion-fetal_brain-full_sample-gene_level.tar.gz - Ensembl transcript level weights: op-fusion-fetal_brain-full_sample-transcript_level.tar.gz<br><br>
DOI: 10.6084/m9.figshare.21331143.v3
title: Underwater acoustic target detection (UATD) dataset

description: This dataset file includes a training set named UATD_Trainging.zip, two test sets named UATD_Test_1.zip and UATD_Test_2.zip respectively, and a sonar image label tool named UATD_OpenSLT.zip
DOI: 10.6084/m9.figshare.21915384.v1
title: Supplementary Material for: Polygenic contributions to suicidal thoughts and behaviors in a sample ascertained for alcohol use disorders

description: Introduction: Suicidal thoughts and behaviors have partially distinct genetic etiologies. Methods: We used PRS-CS to create polygenic risk scores (PRS) from GWAS of non-suicidal self-injury, broad sense self-harm ideation, non-fatal suicide attempt, death by suicide, and depression. Using mixed-effect models, we estimated whether these PRS were associated with a range of suicidal thoughts and behaviors in the Collaborative Study on the Genetics of Alcoholism (N = 7,526). Results: All PRS were significantly associated with suicidal ideation and suicide attempt (betas=0.08-0.44, FDR&lt;0.023). All PRS except non-suicidal self-injury PRS were associated with active suicidal ideation (betas=0.14-0.22, FDR&lt;0.003). Several associations remained significant in models where all significant PRS were included as simultaneous predictors, and when all PRS predicted suicide attempt, the PRS together explained 6.2% of the variance in suicide attempt. Significant associations were also observed between some PRS and persistent suicidal ideation, non-suicidal self-injury, compounded suicide attempt and desire to die. Conclusion: Our findings suggest that PRS for depression does not explain the entirety of the variance in suicidal thoughts and behaviors, with PRS specifically for suicidal thoughts and behaviors making additional and sometimes unique contributions.
DOI: 10.6084/m9.figshare.24646305.v1
title: Database of Global Wetland Validation Samples_GWVS.rar

description: A database of global wetland validation samples for wetland mapping.
DOI: 10.6084/m9.figshare.1290723.v3
title: Codium southern Madagascar

description: Supplementary information and data to go with paper "Molecular survey of <em>Codium</em> species diversity in southern Madagascar"
DOI: 10.6084/m9.figshare.19961033.v1
title: Model of sex-chromosome Evolution - datasets

description: Collection of datasets for "Sheltering of deleterious mutations explains the stepwise extension of recombination suppression on sex chromosomes and other supergenes"
DOI: 10.6084/m9.figshare.24653982.v1
title: Triaxial fluid injection experiments involving Injecting fluid directly into a fault versus adjacent to a fault

description: This is the experimental data for the manuscript entitled <b><i>A laboratory study on fault slip caused by fluid injection </i></b><b><i>direc</i></b><b><i>tly versus indirectly into a fault: implications for induced seismicity in EGS</i></b>, which has been submitted for consideration for publication in <b><i>Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences</i></b>.The files include the recorded and computed data presented in the manuscript. Specifically, "Fluid injection directly into a fault.xlsx" is the hydro-mechanical data for the experiment involving fluid injection directly into a fault, "Fluid injection adjacent to a fault.xlsx" is the hydro-mechanical data for the experiment involving injecting fluid adjacent to a fault in granite sample, and "Surface morphology.csv" is the topography data of the presumably same fault surface in the two experiments.
DOI: 10.6084/m9.figshare.4246412.v1
title: Supplementary Material for: Outcomes of Endobronchial Valve Treatment Based on the Precise Criteria of an Endobronchial Catheter for Detection of Collateral Ventilation under Spontaneous Breathing

description: <b><i>Background:</i></b> Endoscopic lung volume reduction with valves is a valid therapeutic option for COPD patients with severe emphysema. The exclusion of interlobar collateral ventilation (CV) is an important predictor of clinical success. <b><i>Objectives:</i></b> Recently, a catheter-based endobronchial in vivo measurement system (Chartis, Pulmonx, USA) has become routine in the clinical evaluation of CV status in target lobes, but the criteria for phenotyping CV by Chartis evaluation have not yet been defined. We asked the questions, how many phenotypes can be identified using Chartis, what are the exact criteria to distinguish them, and how do the Chartis phenotypes respond to valve insertionκ <b><i>Methods:</i></b> In a retrospective study, 406 Chartis assessments of 166 patients with severe COPD were analyzed. Four Chartis phenotypes, CV positive (CV+), CV negative (CV-), low flow (LF) and low plateau were identified. Fifty-two patients without CV were treated with valves and followed for 3 months. <b><i>Results:</i></b> The Chartis phenotypes were discriminated with respect to decline in expiratory peak flow, increase in resistance index and change in total exhaled volume after 1, 2, 3, 4 and 5 min of measurement time (p &lt; 0.0001, ANOVA), and the cutoff criteria were defined accordingly. To examine the application of these phenotyping criteria, students applied them to 100 Chartis assessments, and they demonstrated almost perfect inter- and intraobserver agreements (κ &gt; 0.9). Compared to baseline, CV- and LF patients with ipsilateral CV- lobe showed an improvement in FEV<sub>1</sub> (p &lt; 0.05), vital capacity (p &lt; 0.05) and target lobe volume reduction (p &lt; 0.005) after valve insertion. <b><i>Conclusion:</i></b> This study describes the most prevalent Chartis phenotypes.
DOI: 10.6084/m9.figshare.729208.v1
title: DoOP plants v1.0 dataset

description: Promoter sequences, alignments and conserved motifs for the DoOP database, plant section, v1.0.
DOI: 10.17632/5yf3c2mk66
title: Intelligent Detection of Office Occupancy Based on Hybrid Data Mining

description: This study aims to use hybrid data mining technology to realize office occupancy intelligent detection to improve space utilization, reduce energy consumption, and enhance employee efficiency. Firstly, K-means clustering is carried out on the original data after pre-processing by fusing images, sensors, and behavioral data, and the data is divided into different clusters. Secondly, the Deep Residual Attention Network (DRAN) is utilized to extract the feature from the data of each cluster. Finally, the Weighted Voting-based Extreme Learning Machine (WV-ELM) is employed to classify and detect the data, to realize the occupancy status identification with higher precision. The results show that the proposed model’s accuracy achieves 96.17%, at least an improvement of 6.23%. When iteration times are 100, precision, F1 score, and recall reach 91.30%, 90.96%, and 89.22%, respectively. Moreover, the proposed algorithm outperforms other comparison algorithms on Root Mean Square Error (RMSE), Mean Absolute Error (MAE), and Mean Absolute Percentage Error (MAPE), among which RMSE decreases from 5.83 in 20 epochs to 4.66 in 100 epochs, MAE from 8.46 to 7.08, and MAPE from 10.52 to 8.00. Therefore, the detection system proposed in this study is superior to the existing technology in terms of accuracy, real-time, and robustness, and provides effective technical support for the space management and resource optimization of intelligent buildings.
DOI: 10.6084/m9.figshare.10540388.v1
title: DATASET CRF WOMEN VS MEN.xlsx

description: Dataset of individuals with metabolic syndrome before and after 16 weeks of high-intensity interval training
DOI: 10.6084/m9.figshare.1532006.v1
title: Data and code for Olympia oyster local adaptation experiments

description: Datasets and R Code for two experiments assessing local adaptation in Olympia oysters: reciprocal transplant experiment in San Francisco Bay, CA, USA and low salinity tolerance laboratory experiment at Bodega Marine Laboratory, Bodega Bay, CA, USA
DOI: 10.6084/m9.figshare.20334684.v1
title: Smart low interfacial toughness coatings for on-demand de-icing without melting

description: This file contains the data of deicing on the smart Ultra-High Molecular Weight Polyethylene sheet. The data shows the detail of temperature switches of heaters and testing conditions to remove ice without melting it. For more information, please see: https://doi.org/10.1038/s41467-022-32852-6 <br>
DOI: 10.6084/m9.figshare.21590397.v1
title: Rcode from Many-to-one function of cat-like mandibles highlights a continuum of sabre tooth adaptions

description: R script used to perform all the analyses and produce all the plots, written by N. Chatar
DOI: 10.6084/m9.figshare.25140692.v1
title: Dataset for Systematic Review of Internet Memes.docx

description: This dataset presents 24 studies on Internet memes published between 2015-2023 on the Taylor and Francis Online database.
DOI: 10.6084/m9.figshare.28944956.v1
title: Addressing bycatch of depleted species through a marine conservation network in the Canadian Atlantic

description: Bycatch of depleted and vulnerable species is a pressing conservation issue that undermines the sustainability of fisheries worldwide. Here, we utilised spatiotemporal modelling of fisheries-independent survey data to evaluate the potential for existing and proposed Marine Conservation Areas (MCAs) in Atlantic Canada to reduce bycatch vulnerability for three severely-depleted species—Atlantic cod (<i>Gadus morhua</i>), American plaice (<i>Hippoglossoides platessoides</i>) and White hake (<i>Urophycis tenuis</i>)—commonly caught as bycatch in commercial trawl fisheries on the Scotian Shelf-Bay of Fundy. We overlaid predicted distributions of abundance for these depleted species with those of commercially targeted Haddock (<i>Melanogrammus aeglefinus</i>) and Pollock (<i>Pollachius virens</i>) to identify areas of high-vulnerability.
DOI: 10.17632/sz5ntshyhh
title: Data for: The relationship between self-diffusion activation energy and Soret coefficient in binary liquid mixtures

description: This database was compiled from literature and analyzed for correlation between self-diffusion activation energy and Soret coefficient. It contains: names of component 1 and component 2, the mole fraction of each component, the average temperature in Kelvin at which the data was collected, the Soret coefficient measurement method, and the resulting Soret coefficient in K^(-1), as well as the reference from which the data was taken. The self-diffusion activation energies for each component can be found in the associated article.
DOI: 10.6084/m9.figshare.13265471.v6
title: PKU cephalometric dataset

description: This PKU cephalometric dataset containing 102 cephalograms.Licence is CC BY-NC-SA.Use this dataset, please cite following paper,<br>Minmin, Zeng, Zhenlei, Yan, Shuai Liu, Yanheng Zhou, Lixin Qiu, 2020. Cascaded convolutional networks for automatic cephalometric landmark detection. Medical Image Analysis , 101904.
DOI: 10.17632/mwr7rsxpjw
title: The LISE package: Solvers for static and time-dependent superfluid local density approximation equations in three dimensions

description: Nuclear implementation of the density functional theory (DFT) is at present the only microscopic framework applicable to the whole nuclear landscape. The extension of DFT to superfluid systems in the spirit of the Kohn-Sham approach, the superfluid local density approximation (SLDA) and its extension to time-dependent situations, time-dependent superfluid local density approximation (TDSLDA), have been extensively used to describe various static and dynamical problems in nuclear physics, neutron star crust, and cold atom systems. In this paper, we present the codes that solve the static and time-dependent SLDA equations in three-dimensional coordinate space without any symmetry restriction. These codes are fully parallelized with the message passing interface (MPI) library and the time-dependent code takes advantage of graphic processing units (GPU) for accelerating execution. The dynamic code has checkpoint/restart capabilities and for initial conditions one can use any generalized Slater determinant type of wave function. By generating the appropriate initial quasi-particle wave-functions in a static calculation only, the time-dependent code can describe a large number of physical problems: nuclear fission, collisions of heavy ions, the interaction of quantized vortices with nuclei in the nuclear star crust, excitation of superfluid fermion systems by time dependent external fields, quantum shock waves, domain wall generation and propagation, the dynamics of the Anderson-Bogoliubov-Higgs mode, dynamics of fragmented condensates, vortex rings dynamics, generation and dynamics of quantized vortices, their crossing and recombinations and the incipient phases of quantum turbulence.
DOI: 10.6084/m9.figshare.28508843.v1
title: Dataset for Trajectory Extraction

description: Supplementary materials for a journal submission article, a distributed fiber optic viberation sensing dataset of train and subway in VOC format, in which key information has undergone data anonymization processing, whether there will be additional publicly available content in the future depends on the project planning of the data provider.
DOI: 10.6084/m9.figshare.3555591.v1
title: Appendix B. Additional figures and results for the spatial occupancy analysis of the the caribou data set.

description: Additional figures and results for the spatial occupancy analysis of the the caribou data set.
DOI: 10.6084/m9.figshare.7640456.v1
title: Genome assembly and annotation files for Solenodon paradoxus

description: This repository contains flat text files for the <i>Solenodon paradoxus</i> genome assembly and annotation. A FASTA file is provided for the raw genome assembly (before NCBI submission) produced from Discovar. Annotation files were all produced using this assembly. For the annotation, a raw GFF annotation file from MAKER2 is included for the record. Two more GFF files are included that have the repeat elements and gene annotations parsed, respectively. Two FASTA files containing the gene annotation transcript and protein sequences are also provided. The sequence headers have been renamed with sequential numbered transcript/protein numbers. A lookup table has been provided that associates these numbers with the raw MAKER IDs, which are present in the GFF files. Sequence headers also contain homology information inferred from reciprocal best-BLAST or stringent one-way BLAST searches against related mammalian genome assemblies. The results of these searches, which were used to rename sequences, are included as a homology table. Please see the associated publication for more information. Additional publication data are accessioned in other locations, which are documented at the following webpage: https://darencard.github.io/solPar/.
DOI: 10.6084/m9.figshare.8092514.v1
title: Cadataset-Database-SqlServer.sql

description: To use Sqlserver files, create an empty database in SQL server management studio )SSMS( named "cadataset" and then run the script file (.sql file).
DOI: 10.6084/m9.figshare.8965820.v4
title: Phase Contrast Microscopy of cells with annotation

description: Three breast cell lines with different morphology and mobility were used in this workspace, invasive breast cancer cell line MDA-MB-231 in mesenchymal morphology; non-invasive breast cancer cell line MCF7 in epithelial morphology, and normal breast cell line MCF10A in epithelial morphology. MDA MB 231 and MCF7 cells were grown in DMEM medium containing 10% fetal bovine serum while MCF10A cells were in DMEM:F12 (1:1) containing 5% horse serum, 20 ng/ml epidermal growth factor, 500 ng/ml hydrocortisone, 100 ng/ml cholera toxin, and 10 μg/ml insulin. <br> The cells were grown in incubators containing 5% CO2 and humidity at 37◦C. In terms of viability, proliferation, and infection, they were monitored daily by inverted light microscopy and multiplied with trypsin, paying attention to the doubling times of each cell culture. Periodic stocking was applied to ensure the continuity of the cells. Cells were frozen in a solution containing FBS and DMSO. Storage was carried out at -80◦C and then -196◦C in a liquid nitrogen tank. Then, by utilizing the Fiji distribution of ImageJ [12,13] individual cell boundaries are marked for images taken for single-cell analysis, and cell layer boundaries are manually marked for image analysis.
DOI: 10.17632/cz6xtx2pv4
title: Augmented Reality in Higher Education: A Systematic Review and Meta-Analysis of the Literature from 2000 to 2022

description: This study selected 208 articles published from 2000 to 2022 on the application of AR in higher education and conducted a systematic review examining four aspects: publication trends and applied disciplines, technical characteristics, instructional design, and learning outcomes and measurement methods.
DOI: 10.17632/pnwfrpg2vk
title: XRD_XRF_MIP

description: This data contains Mercury Intrusion Porosimetry (MIP), X-ray diffraction (XRD) and X-ray fluorescence (XRF) laboratory results
DOI: 10.25399/unisadata.19745413.v1
title: Online shopping

description: Online shopping data set for Prof KM Makhitha; Department of Marketing and Retail Management; College of Economic and Management Sciences; University of South Africa.
DOI: 10.6084/m9.figshare.12320276.v1
title: Supplementary Material for: Diagnosis and Empirical Treatment of Urinary Tract Infections in Urologic Outpatients

description: <b><i>Introduction:</i></b> Due to a continuing increase of bacterial resistance in common uropathogens, we wanted to revisit our standards for the diagnosis and treatment of lower urinary tract infections, in the setting of urological outpatient care in a conurbation in Germany. <b><i>Patients and Methods:</i></b> All subjects presenting with significant bacteriuria at our urology clinics in Mülheim, Germany, in 2011 were included. Comorbidity, bacterial species, urinary tract symptoms, and empirically prescribed antibiotics were taken from the patients’ records. <b><i>Results:</i></b> In 2011, a total of 1,324 patients were included (793 female, 531 male). Of the 771 patients with symptomatic bacteriuria, 647 received antibiotic treatment, as well as 116 of 409 patients with asymptomatic bacteriuria. <i>Escherichia coli</i> was identified in 60% of the included patients. In 427 <i>E. coli</i> infections, bacterial resistance was found in 14% of 316 cases treated with quinolone, in 21% of 53 cases treated with co-trimoxazole, and in only 3% of 58 cases treated with nitrofurantoin. <b><i>Conclusions:</i></b> We found a high use of fluoroquinolones for empirical first-line antibiotics in the treatment of lower urinary tract infections. In our regional setting, antibiotic stewardship needs to be promoted, along national and international guidelines, to avoid unnecessary prescription of fluoroquinolones for empirical treatment.
DOI: 10.17632/nzg5g2gzrd
title: Resilience and vulnerability of neural speech tracking in children with cochlear implants

description: This dataset contains the preprocessed EEG data and the speech envelope of the stories presented to perform the encoding model and estimate TRFs, as well as all codes used for statistical analysis and results visualization. This dataset does not include the original raw data since participants are minors.
DOI: 10.17632/ygk7w44drr
title: Porewater_DOM_BYD_Data_1

description: This dataset “Porewater_DOM_BYD_Data”contains the original data of all the figures in the submitted article“Strong depth-dependent chemical and structural characteristics of dissolved organic matter (DOM) in sediment porewater in Baiyangdian Lake” .
DOI: 10.6084/m9.figshare.19743268.v1
title: Tablas para la revista.docx

description: Tablas para la revista
DOI: 10.6084/m9.figshare.21345177.v6
title: Arctic surface air temperatures from 1979-2021: A newly reconstructed data with deep learning method

description: The dataset provides 1°x1° monthly temperature anomalies (relative to 1981–2010 average) from 30°N to 90°N from 1979 to 2021.
DOI: 10.6084/m9.figshare.22351297.v2
title: AOB Plants Competition Paper 2023

description: Pairwise competition between grasses and forbs in response to temperature and water.