cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/t763v-p2760
title: O. tauri @ G2/M

description: O. tauri cell synchronization .
description: <strong>Tilt Series Date:</strong> 2007-09-27</p>
<strong>Data Taken By:</strong> Lu Gan</p>
<strong>Species / Specimen:</strong> Ostreococcus tauri</p>
<strong>Strain:</strong> RCC745</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-56.0°, 56.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> prepared by Lu Gan at Caltech; data collected by Lu Gan; processed by Lu Gan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Treated with HU for 12h, then PP for 3h</p>
<strong>Sample Preparation:</strong> Q-foil R3.5/1, BSA treated 10nm gold, 100% humidity, -2mm offset,</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-09-27-24/rawdata/</p>RCC745_HUPP_3h_11PM_05.mrc,  Tilt Series (Pixel Size 1.59 nm), 239.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-09-27-24/rawdata/RCC745_HUPP_3h_11PM_05.mrc"
        > <i class="download icon"></i> Download </a></p>

        RCC745_HUPP_3h_11PM_05.rec,  Reconstruction (Pixel Size 3.18 nm), 210.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-09-27-24/3dimage_3266/RCC745_HUPP_3h_11PM_05.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/77tng-6jp34
title: CB15N Sacculus

description: C. crescentus CB15N sacculus .
description: <strong>Tilt Series Date:</strong> 2007-05-04</p>
<strong>Data Taken By:</strong> Lu Gan</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-70.0°, 70.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> prepared by Lu Gan at Caltech; data collected by Lu Gan; processed by Lu Gan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown to exponential phase in PYE; Purified by hot SDS</p>
<strong>Sample Preparation:</strong> C-flat 2/2, BSA treated 10nm gold, 100% humidity, -4mm offset,</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-05-04-1/rawdata/</p>CB15N_01.mrc,  Tilt Series (Pixel Size 0.96 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-05-04-1/rawdata/CB15N_01.mrc"
        > <i class="download icon"></i> Download </a></p>

        CB15N_01.rec,  Reconstruction (Pixel Size 0.96 nm), 321.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-05-04-1/3dimage_3050/CB15N_01.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/rgbsw-rj153
title: CB15N Sacculus

description: C. crescentus CB15N sacculus .
description: <strong>Tilt Series Date:</strong> 2007-10-15</p>
<strong>Data Taken By:</strong> Lu Gan</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-69.0°, 69.0°), step: 1.5°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> prepared by Lu Gan at Caltech; data collected by Lu Gan; processed by Lu Gan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown to exponential phase in PYE; Purified by hot SDS</p>
<strong>Sample Preparation:</strong> C-flat 2/2, BSA treated 10nm gold, 100% humidity, -4mm offset,</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-10-15-11/rawdata/</p>CB15N_45.mrc,  Tilt Series (Pixel Size 0.78 nm), 788.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-10-15-11/rawdata/CB15N_45.mrc"
        > <i class="download icon"></i> Download </a></p>

        CB15N_45.rec,  Reconstruction (Pixel Size 0.78 nm), 229.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-10-15-11/3dimage_3120/CB15N_45.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/neffg-6r887
title: MG1655 Sacculus

description: E. coli MG1655 sacculus .
description: <strong>Tilt Series Date:</strong> 2007-08-11</p>
<strong>Data Taken By:</strong> Lu Gan</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> MG1655 sacculi</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-70.0°, 70.0°), step: 2.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> prepared by Lu Gan at Caltech; data collected by Lu Gan; processed by Lu Gan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown to exponential phase in LB; Purified by hot SDS</p>
<strong>Sample Preparation:</strong> C-flat 4/2, BSA treated 5nm gold, 100% humidity, -2mm offset,</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-08-11-17/rawdata/</p>MG1655_19.mrc,  Tilt Series (Pixel Size 0.78 nm), 402.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-08-11-17/rawdata/MG1655_19.mrc"
        > <i class="download icon"></i> Download </a></p>

        MG1655_19.rec,  Reconstruction (Pixel Size 0.78 nm), 540.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2007-08-11-17/3dimage_3206/MG1655_19.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/qh248-anc45
title: PAOI delta aer2

description: Pseudomonas aeruginosa delta aer2
description: <strong>Tilt Series Date:</strong> 2014-10-15</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Kylie Watts</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Streak on LB plates and incubate overnight at 37°C- Inoculate 5 mL MOPS Minimal Media Limited Nitrogen from plate and grow at 30°C for ~24 hours</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-15-7/rawdata/</p>PAO1DeltaAer2MC0007_mcorr.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-15-7/rawdata/PAO1DeltaAer2MC0007_mcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        PAO1DeltaAer2MC0007_mcorr_full.rec,  Reconstruction (Pixel Size 1.28 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-15-7/3dimage_47141/PAO1DeltaAer2MC0007_mcorr_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.n66r98
title: Occurrence Download

description: A dataset containing 135 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physocarpus opulifolius",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 135 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002355-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zyacjk
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physocarpus opulifolius",
 "Country is Slovakia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002354-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/rwn8x-g5765
title: RodZ oe

description: Raw data files of RodZ oe
description: <strong>Tilt Series Date:</strong> 2009-03-09</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, IMOD</p>
<strong>Collaborators and Roles:</strong> Strains were provided by Anisah Alyahya (Jacobs-Wagner lab). Data collected and processed by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> A plasmid pJS14pxylrodZ was electroporated into CB15N. The cells were then grown in PYE plates containing antibiotics. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-09-16/rawdata/</p>09mar09a_bx346_2_016.mrc,  Tilt Series (Pixel Size 0.632 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-09-16/rawdata/09mar09a_bx346_2_016.mrc"
        > <i class="download icon"></i> Download </a></p>

        zap015.png,  119.9 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-09-16/file_2542/zap015.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/eg91p-bgy90
title: Bsubtilis_3267

description: Bsubtilis_Alp7A
description: <strong>Tilt Series Date:</strong> 2011-12-07</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> AD3267, ponA null, Alp7A-GFP</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from Joe Pogliano at UCSD</p>
<strong>Purification / Growth Conditions / Treatment:</strong> sporulation media</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-12-07-27/rawdata/</p>32670007.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-12-07-27/rawdata/32670007.mrc"
        > <i class="download icon"></i> Download </a></p>

        32670007_part122_14.rec,  Reconstruction (Pixel Size 1.9 nm), 877.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-12-07-27/3dimage_26161/32670007_part122_14.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.u3mc5d
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Speothos venaticus"
 ]
}

 The dataset includes 40 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002356-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/a223a-s2a45
title: Bacillus subtilis JFG351

description: Raw data files of Bacillus subtilis JFG351
description: <strong>Tilt Series Date:</strong> 2009-07-28</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (60.0°, -60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Jennifer (Pogliano lab)</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Induced sporulation t=2.5</p>
<strong>Sample Preparation:</strong> quantifoil grid, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2009-07-28-11/rawdata/</p>09jul28a_pos3_012.mrc,  Tilt Series (Pixel Size 0.961 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2009-07-28-11/rawdata/09jul28a_pos3_012.mrc"
        > <i class="download icon"></i> Download </a></p>

        cell12_full.rec,  Reconstruction (Pixel Size 1.922 nm), 899.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2009-07-28-11/3dimage_6233/cell12_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ff4bh-q1p38
title: Hyphomonas EB session14 27.5KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2009-05-22</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-62.0°, 62.0°), step: 2°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -7.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media, treated with EB...</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-05-22-9/rawdata/</p>09may22a_bx200d_012.mrc,  Tilt Series (Pixel Size 0.774 nm), 520.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-05-22-9/rawdata/09may22a_bx200d_012.mrc"
        > <i class="download icon"></i> Download </a></p>

        09may22a_bx200d_012_1k.rec,  Reconstruction (Pixel Size 1.548 nm), 164.9 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/x889h-swr77
title: Hyphomonas session14 27.5KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2009-05-22</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -7.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media, overnight at 4degree...</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-05-22-51/rawdata/</p>09may22b_bx22gr1_026.mrc,  Tilt Series (Pixel Size 0.774 nm), 520.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-05-22-51/rawdata/09may22b_bx22gr1_026.mrc"
        > <i class="download icon"></i> Download </a></p>

        09may22b_bx22gr1_026_1k.rec,  Reconstruction (Pixel Size 1.548 nm), 106.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-05-22-51/3dimage_7674/09may22b_bx22gr1_026_1k.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/x7yzr-cde83
title: MT310_xyl(-)_metal(-)

description: Raw data files of MT310_xyl(-)_metal(-)
description: <strong>Tilt Series Date:</strong> 2009-06-21</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach</p>
<strong>Collaborators and Roles:</strong> The MT310 strain was constructed by Martin Thanbichler; cell cultured and treated by Zhuo Li; data collected and processed by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MT310 cells were cultured for 20 hours. No xylsoe or metal salt was added. </p>
<strong>Sample Preparation:</strong> 10 nm gold. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-21-44/rawdata/</p>09jun21a_Ctlnoxyl_051.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-21-44/rawdata/09jun21a_Ctlnoxyl_051.mrc"
        > <i class="download icon"></i> Download </a></p>

        09jun21a_Ctlnoxyl_051_full.rec,  Reconstruction (Pixel Size 1.9 nm), 419.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-21-44/3dimage_4943/09jun21a_Ctlnoxyl_051_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/my3hs-4hq90
title: Vibrio cholerae

description: 11apr05a_
description: <strong>Tilt Series Date:</strong> 2011-04-05</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> 2740-80</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 0.0 eV/Å²,  defocus: 0.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
<strong>Collaborators and Roles:</strong> Mekalanos</p>
  mpa2011-04-05-26_slicer8720.jpg: Vibrio cholerae .  resolved membrane mpa2011-04-05-26_slicer8737.jpg: Vibrio cholera .  Unknown filament mpa2011-04-05-26_slicer8739.jpg: Vibrio cholera .  Unknown mpa2011-04-05-26_slicer8741.jpg: Vibrio cholera  .  Unknown mpa2011-04-05-26_slicer8743.jpg: Vibrio cholera  .  Unknown ring mpa2011-04-05-26_slicer8745.jpg: Vibrio cholera .  Unknown
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-04-05-26/rawdata/</p>11apr05a_VC8_029.mrc,  Tilt Series (Pixel Size 0.0 nm), 1.0 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        11apr05a_VC8_029_full.rec,  Reconstruction (Pixel Size 0.0 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-04-05-26/3dimage_34724/11apr05a_VC8_029_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bd1nb-cmd52
title: M3 in Phe-MSM

description: Delftia acidovorans Cs1-4 delta-npdA (strain M3) grown in MSM with phenanthrene
description: <strong>Tilt Series Date:</strong> 2009-03-13</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Delftia acidovorans</p>
<strong>Strain:</strong> Cs1-4 delta-npdA</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 0.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> grown by Bill Hickey at UW-Madison; data collected and processed by Elitza Tocheva</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown in MSM with phenanthrene.</p>
<strong>Sample Preparation:</strong> 20nm gold, 2s blot, -2 offset</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2009-03-13-17/rawdata/</p>09mar12b_pos1M3_007.mrc,  Tilt Series (Pixel Size 0.962 nm), 1.0 GB  
        
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        nano7_full.rec,  Reconstruction (Pixel Size 1.924 nm), 490.7 MB  
        
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