cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25919/sjbn-f235
title: Parkes observations for project PX500 semester 2022OCTS_06

description: This proposal relates to time purchased by the Chinese Academy of Sciences for Parkes follow-up confirmation and timing of FAST discoveries. As the observing time has been purchased this proposal (and the related PX501) does not require TAC grading. The primary reason for submitting a proposal is to ensure an outreach statement and that the proposal is entered into OPAL for the data archive to access. The Chinese team have two time requests. The time scheduled for the first, relating to this proposal, will be allocated in blocks of 24 hours and the data will become available in the data archive with an 18 month embargo period. The second type of time will be scheduled in shorter blocks and the data archived with a 10 year embargo.
DOI: 10.15129/39f97ad1-8173-4999-b0b6-41c6ae923fe6
title: Data for: "Crystal structure of a copper-mefenamate complex solvated with diglyme and water"

description: Raw and processed crystallographic data associated with publication: Raw data in AB4576_1_6F_100K.zip Processed data in processed.zip Further details in README.txt
DOI: 10.17632/c5m94tth9n.2
title: Ortiz et. al. Bacterial Interactions in C. elegans

description: Bacterial loads in C. elegans intestine after monoculture colonization or co-culture colonization.
DOI: 10.5281/zenodo.5572861
title: Dataset: Analysis of IFTTT Recipes to Study How Humans Use Internet-of-Things (IoT) Devices

description: This archive contains the files submitted to the 4th International Workshop on Data: Acquisition To Analysis (DATA) at SenSys. Files provided in this package are associated with the paper titled "Dataset: Analysis of IFTTT Recipes to Study How Humans Use Internet-of-Things (IoT) Devices" With the rapid development and usage of Internet-of-Things (IoT) and smart-home devices, researchers continue efforts to improve the ''smartness'' of those devices to address daily needs in people's lives. Such efforts usually begin with understanding evolving user behaviors on how humans utilize the devices and what they expect in terms of their behavior. However, while research efforts abound, there is a very limited number of datasets that researchers can use to both understand how people use IoT devices and to evaluate algorithms or systems for smart spaces. In this paper, we collect and characterize more than 50,000 recipes from the online If-This-Then-That (IFTTT) service to understand a seemingly straightforward but complicated question: ''What kinds of behaviors do humans expect from their IoT devices?'' The dataset we collected contains the basic information of the IFTTT rules, trigger and action event, and how many people are using each rule. For more detail about this dataset, please refer to the paper listed above.
description: This work was funded in part by the National Science Foundation under grants CNS-1813263 and CNS-1909221. Any opinions, findings, conclusions, or recommendations expressed are those of the authors and do not necessarily reflect the views of the NSF.
description: {"references": ["Haoxiang Yu, Jie Hua, and Christine Julien. 2021. Analysis of IFTTT Recipes to Study How Humans Use Internet-of-Things (IoT) Devices. In Proceedings of the 19th ACM Conference on Embedded Networked Sensor Systems (SenSys '21). Association for Computing Machinery, New York, NY, USA, 537\u2013541. DOI:https://doi.org/10.1145/3485730.3494115"]}
DOI: 10.6084/m9.figshare.19650357
title: Supplementary Material for: Fluid control in neovascular age-related macular degeneration with brolucizumab: an analysis of the HAWK and HARRIER phase 3 trials

description: Introduction: Neovascular age-related macular degeneration (nAMD) is characterised by exudation of fluid from abnormally growing blood vessels in the macula. Anti-vascular endothelial growth factor (VEGF) therapy is standard treatment for nAMD. Fluid resolution is used both as an indicator of disease control and to guide the frequency of treatment because of anti-VEGF therapy effectiveness in reducing neovascularization-related exudation. Herein reports a post-hoc assessment of the HAWK and HARRIER trials comparing efficacy and safety of brolucizumab with aflibercept in patients with nAMD. Materials and Methods: HAWK randomized 1078 patients with untreated, active choroidal neovascularization due to AMD in the study eye to receive brolucizumab 3mg, 6mg or aflibercept 2mg. In HARRIER, 739 patients received brolucizumab 6mg or aflibercept 2mg. Brolucizumab was injected at weeks 0, 4 and 8, and thereafter q12w unless disease activity was identified (injection interval: q8w). Aflibercept was injected q8w after the loading phase; aligned with approved dosing at study initiation. The objective of this analysis was to assess effects of brolucizumab versus aflibercept on retinal fluid resolution during two phase 3 trials (HAWK and HARRIER) in patients with nAMD. Anatomical assessments for intraretinal fluid (IRF) and subretinal fluid (SRF) were performed every 4 weeks by spectral domain optical coherence tomography. Sustained dryness was defined as a patient being fluid-free (SRF and IRF) on ≥3 consecutive visits. Time to sustained dryness was determined by Kaplan-Meier estimates. Results: At week 96, fluid resolution (absence of IRF and SRF) was achieved by more brolucizumab- (6mg; 76.1%) versus aflibercept-treated patients (63.1%; p=0.0002, HAWK); 75.4% versus 61.8% (p&lt;0.0001, HARRIER). More patients achieved sustained dryness with brolucizumab versus aflibercept: at 96 weeks, 87.9% (brolucizumab 3mg) and 86.1% (brolucizumab 6mg) versus 82.0% (aflibercept) in HAWK and 91.2% (brolucizumab) versus 78.0% (aflibercept) in HARRIER. Sustained dryness was achieved faster and hence with fewer brolucizumab injections. Discussion/Conclusion: Brolucizumab dried the macula in patients with nAMD faster and to a greater degree than aflibercept. Achieving sustained dryness faster, and therefore with fewer injections, provides an opportunity for earlier decisions relating to treatment interval extension potentially reducing treatment burden.
DOI: 10.6084/m9.figshare.19741999.v1
title: analysis_dataset

description: Dataset of bird detection data and all elevation and habitat covariates
DOI: 10.6084/m9.figshare.20368725
title: Supplementary Material for: Analysis of microvascular abnormalities in obesity: a comparative study with healthy subjects using swept source optical coherence tomography angiography and adaptive optics

description: PURPOSE: To analyze retinal microvasculature in obese subjects as compared to a normal-weight population. METHODS: In this case-control observational study, swept-source optical coherence tomography angiography (SS-OCTA) and adaptive optics (AO) were performed in eyes of non-diabetic, non-hypertensive, obese patients and in healthy controls. AO was used to calculate the wall-to-lumen ratio (WLR). The foveal avascular zone (FAZ), the macular vessel density (VD) and the macular perfusion density of the superficial and deep capillary plexuses were analyzed in 6x6mm macular OCTA cubes. SS-OCTA was also used to measure the choroidal thickness, the retinal nerve fiber layer (RNFL) and the VD of the retinal peripapillary capillary plexus (RPCP). RESULTS: The obese group included 45 eyes (24 patients), and the control group included 46 eyes (23 subjects). The central macular density and perfusion density were significantly lower in obese patients compared to controls, in the deep retinal layer (0.28 [0.01-0.69] versus 1.24 [0.82-1.66], p=0.006 and 0.006 [0.001-0.015] versus 0.025 [0.016-0.034], p=0.01), respectively, after adjustment for systolic blood pressure. No differences were found in macular vascular density in other areas, FAZ (circularity, area, perimeter), choroidal thickness, RNFL. WLR was increased in obese patients (0.252 [0.246-0.259] versus 0.239 [0.231-0.245] in controls, p=0.016). CONCLUSION: Obesity was associated with retinal microvascular changes regardless of the presence of diabetes and hypertension. Our findings suggest the presence of infraclinical microvascular changes directly associated with obesity, which can be identified noninvasively through retinal imaging.
DOI: 10.6084/m9.figshare.21096181
title: data_and_analysis.zip

description: raw data and analysis scripts
DOI: 10.5066/f7c827sr
title: Map of landslides triggered by the January 12, 2010, Haiti earthquake

description: This inventory was originally created by Harp and others (2016) describing the landslides triggered by the M 7.0 Haiti earthquake that occurred on 12 January 2010 at 21:53:10 UTC. Care should be taken when comparing with other inventories because different authors use different mapping techniques. This inventory also could be associated with other earthquakes such as aftershocks or triggered events. Please check the author methods summary and the original data source for more information on these details and to confirm the viability of this inventory for your specific use.

With the exception of the data from USGS sources, the inventory data and associated metadata were not acquired by the U.S. Geological Survey (USGS) and thus have not been reviewed for accuracy and completeness by the USGS. They are presented as part of this data series for convenience of the user only, as part of an effort to make published ground-failure inventories more accessible from a single aggregated site. No warranty, expressed or implied, is made regarding the display or utility of the data on any other system or for general or scientific purposes, nor shall the act of distribution constitute any such warranty.
DOI: 10.5285/7ad889f2cc1647efba7e6a356098e4f3
title: CRU TS3.26: Climatic Research Unit (CRU) Time-Series (TS) Version 3.26 of High-Resolution Gridded Data of Month-by-month Variation in Climate (Jan. 1901- Dec. 2017)

description: The gridded CRU TS (time-series) 3.26 data are month-by-month variations in climate over the period 1901-2017, on high-resolution (0.5x0.5 degree) grids, produced by the Climatic Research Unit (CRU) at the University of East Anglia.

This version of CRU TS supersedes version 3.25, additionally however these data are superseded by the CRU TS 4.02 data which has a new processing methodology. This concurrent release of CRU TS 3.26 and CRU TS 4.02 is made to support users during the transition to the CRU TS version 4 data. No further releases of version 3 are planned.

CRU TS 3.26 variables are cloud cover, diurnal temperature range, frost day frequency, PET, precipitation, daily mean temperature, monthly average daily maximum and minimum temperature, and vapour pressure for the period Jan. 1901 - Dec. 2017.

CRU TS 3.26 data were produced using the same methodology as for the 3.21, 3.22, 3.23, 3.24.01, 3.26 datasets. This version contains updates the dataset with 2016 data, some new stations have been added for TMP and PRE only. This release is the latest release of the CRU TS data.  Known issues predating this release remain.

The CRU TS 3.26 data are monthly gridded fields based on monthly observational data, which are calculated from daily or sub-daily data by National Meteorological Services and other external agents. The ASCII and NetCDF data files both contain monthly mean values for the various parameters.

All CRU TS output files are actual values - NOT anomalies.
DOI: 10.6084/m9.figshare.21557808
title: Supplementary Material for: IRF1 Is Required for MDA5 (IFIH1) Induction by IFN-α, LPS, and poly(I:C) in Murine Macrophages

description: Melanoma differentiation-associated protein 5 (MDA5) induces type I interferons (IFNs) after the recognition of viral RNA. In addition, gain-of-function mutations in the interferon induced with helicase C domain 1 (<i>IFIH1</i>) gene, which encodes MDA5, lead to type I interferonopathies. Here, we show that <i>Mda5</i> is highly expressed in murine macrophages and is regulated by pro-inflammatory stimuli such as the cytokines IFN-α and IFN-γ, the TLR ligand LPS, and a mimic of dsRNA, poly(I:C). <i>Mda5</i> induction is mediated through the production of reactive oxygen species. The induction by IFN-α or LPS occurs at the transcriptional level since the <i>Mda5</i> mRNA half-life before and after induction is very stable. Interestingly, STAT1 is required for <i>Mda5</i> induction by IFN-α, LPS, or poly(I:C). The time course of induction of at least 3 h and the need for protein synthesis indicate that <i>Mda5</i> requires an intermediate protein for transcription. In transient transfection experiments, we found that a 105-bp fragment of this gene, between −1153 and −1258 bp relative to the transcription start site, is required for transcription. In this specific region, we observed a sequence containing an IRF-binding motif, which, when mutated, abolishes the induction of <i>Mda5</i>. This sequence is strongly conserved in the <i>IFIH1</i> promoters of eutherian mammals and in other distant species. Kinetic experiments, chromatin immunoprecipitation assays, and gene-silencing experiments revealed that IRF1 is required for induction of <i>Mda5</i> expression.
DOI: 10.5281/zenodo.4922681
title: Supplementary material to The Bremen-Cog's timber resources https://doi.org/10.1080/10572414.2022.2122243

description: Supplementary data to Belasus and Daly 2022. <strong>The <em>Bremen-Cog</em>’s timber resources</strong>. <em>International Journal of Nautical Archaeology</em>. https://doi.org/10.1080/10572414.2022.2122243 A summary of the dendrochronological data that forms the background to the analysis of the timbers of the Bremen Cog is presented. In addition, all tree-ring measurements from the Bremen Cog is published here.
DOI: 10.5281/zenodo.5571057
title: Footstep-Induced Floor Vibration Dataset In Different Deployment Environment

description: Footstep-induced floor vibration sensing has been used in many smart home applications, such as elderly/patient care, health monitoring. However, impact by the deployment environment, the acquired dataset in the different environments might have different characteristics. We utilize structural vibration sensing to acquire the footstep-induced floor vibration dataset under different humans, wearing different shoes, and in different environments. We also utilize wearable accelerometer sensing to capture the footstep event activity as the ground truth of the vibration dataset. The name format of each variable is as: "People ID_Environment ID_Sensor ID_Lane ID_Shoe ID". In this dataset, we have two human objects, eight environments, four sensors, three lanes, and three different shoes. You can find more details in our published paper. Each variable is a struct, and it contains four files: (1)'vibration': the raw vibration data (2,3,4)'IMU_X/Y/Z': the raw data of wearable accelerometer sensor. Currently, we have two papers published using this dataset [1,2].
description: {"references": ["Zhang, Yue, et al. \"AutoQual: task-oriented structural vibration sensing quality assessment leveraging co-located mobile sensing context.\" CCF Transactions on Pervasive Computing and Interaction (2021): 1-19.", "Yu, Tong, et al. \"Vibration-Based Indoor Human Sensing Quality Reinforcement via Thompson Sampling.\" Proceedings of the First International Workshop on Cyber-Physical-Human System Design and Implementation. 2021."]}
DOI: 10.5281/zenodo.4724765
title: The brain integrates proprioceptive information to ensure robust locomotion

description: Robust locomotion relies on information from proprioceptors: sensory organs that communicate the position of body parts to the spinal cord and brain. Proprioceptive circuits in the spinal cord are known to regulate locomotion in challenging environments. Yet, the regulatory importance of the brain remains less clear. Here, we examine the role of the brain in integrating proprioceptive information during locomotion through mouse genetic studies and in vivo electrophysiology. The systemic removal of proprioceptors leaves the animals in a constantly perturbed state, similar to that observed during mechanically perturbed locomotion in wild type. In contrast, after surgical interruption of the ascending proprioceptive pathways, wild-type mice show normal walking behaviour, but lose the ability to cope with external perturbations. Our findings provide direct evidence of a pivotal role for ascending proprioceptive information in achieving safe locomotion. In this supplementary data set we made available: a) the metadata with animal information (mouse_data.xlsx); b) the raw EMG (RAW_EMG.RData); c) the touchdown and lift-off timings (CYCLE_TIMES.RData) and d) the kinematics (KINEMATICS.RData) of the recorded limb; e) the R code (muscle_synergies.R , continuously updated at https://github.com/alesantuz/musclesyneRgies) to extract muscle synergies. In total, 146 trials from 23 mice are included in the supplementary data set.
DOI: 10.5281/zenodo.7233563
title: Optical tomography measurements and reconstructions of a multiple-scattering 3d-printed microphantom

description: This dataset contains 2 sets of measurements of a 3d-printed microphantom, carried out with optical diffraction tomography system at Warsaw University of Technology. The measurements are conducted for 2 different wavelengths: 633nm and 835nm. Also, tomographic reconstructions of these datasets are shown. The reconstructions were computed with 3 algorithms: GPSC [1], MSBP-I [2] and MSBP-E [3]. Additionally, model of the 3D-printed microphantom is given. All files are *.mat files. In the reconstruction files there are 4 variables: REC - reconstruction matrix with information about 3D refractive index values in the microphantom dx - sample size in the reconstruction in x-y direction dz - sample size in the reconstruction in z direction (if not given, dz=dx) niter - number of iterations that were computed to generate the reconstruction The variables in the sinogram files are: dx - sample size in tomographic projections lambda - wavelength M - magnification in the optical system n_immersion - refractive index of the immersion medium NA - numerical aperture of the optical system rayXY - x-y coordinates of vectors representing illumination directions from which tomographic projections were acquired SINOamp - amplitude distribution of tomographic projections SINOph - phase distributions of tomographic projections The variables in the phantom model files are: dx - sample size n_immersion - refractive index of simulated immersion n_phantom - refractive index of the phantom model [1] W. Krauze, “Optical diffraction tomography with finite object support for the minimization of missing cone artifacts,”277<br> Biomed. optics express 11, 1919–1926 (2020)<br> [2] S. Chowdhury, M. Chen, R. Eckert, D. Ren, F. Wu, N. Repina, and L. Waller, “High-resolution 3D refractive index292<br> microscopy of multiple-scattering samples from intensity images,” Optica 6, 1211 (2019).<br> [3] U. S. Kamilov, I. N. Papadopoulos, M. H. Shoreh, A. Goy, C. Vonesch, M. Unser, and D. Psaltis, “Learning approach288<br> to optical tomography,” Optica 2, 517 (2015).
description: {"references": ["W. Krauze, \"Optical diffraction tomography with finite object support for the minimization of missing cone artifacts,\"277 Biomed. optics express 11, 1919\u20131926 (2020).", "S. Chowdhury, M. Chen, R. Eckert, D. Ren, F. Wu, N. Repina, and L. Waller, \"High-resolution 3D refractive index292 microscopy of multiple-scattering samples from intensity images,\" Optica 6, 1211 (2019).", "U. S. Kamilov, I. N. Papadopoulos, M. H. Shoreh, A. Goy, C. Vonesch, M. Unser, and D. Psaltis, \"Learning approach288 to optical tomography,\" Optica 2, 517 (2015)."]}
DOI: 10.17632/8j7dgj9wbz.4
title: Data for: MusicHeritage: A Probabilistic Event-Sensitive Computational Framework for Indian Music Composition and Reconstruction

description: The procreative statistical framework of musical note structures produces a crucial role in multimedia music classification and reconstruction strategies. Another most significant thing for harmonious music composition is the rhythmic structures that provide musical performance in a harmonic form. We have illustrated computational music theory and allied factors to regulate what human beings can acquire, remember, and reconstruct music for sustaining intangible cultural and entertainment heritage. The music strings or symbols are also imperative factors that assist the musicians as performance guidelines. To afford a syntactic outline of musical note arrangements, a stochastic model along with probabilistic context-free music grammar has been discussed in this paper. We have additionally incorporated the state transition analysis in terms of transition table and diagram to demonstrate which state can move to the other one within a finite automaton depending on the behaviors of the current state and associated transition rule. Petri net has been used for modeling and simulating the projected complex music composition framework to analyze overall system performances. The Petri net-based reachability and system efficiency have been evaluated for analyzing the effectiveness of the proposed event-driven music composition architecture. For incorporating real data into the projected framework, the object-oriented music composition and reconstruction framework has also been demonstrated. The system performance evaluation metric has shown that around 92% efficiency level has been achieved by analyzing the projected music composition model.
DOI: 10.18434/mds2-2719
title: Pharmaceutical polymorph identification and multicomponent particle mapping with non-negative matrix factorization
DOI: 10.5281/zenodo.5091137
title: High-precision Aftershock Locations and Fault Planes of the 2016-2017 Central Italy Sequence

description: The earthquake catalog includes high-precision hypocenter relocations for 390,334<br> earthquakes recorded during the 2016-2017 Amatrice (Central Italy) <br> earthquake sequence. The relative locations were computed by double-difference inversion of a <br> combination of INGV phase picks and cross-correlation differential <br> times measured from correlated seismograms with correlation coefficients &gt; 0.7. Planes of normal faults (idx=1-5) are derived from PCA analysis of 2 months of aftershock <br> locations in the CAT4 catalog following large events. Surfaces of detachment faults (idx=7-10) are derived from mapping out the location of correlated earthquakes. Citation: Waldhauser, F., Michele, M., Chiaraluce, L., Di Stefano, R., & Schaff, D. P. (2021). Fault planes, fault zone structure and detachment fragmentation resolved with highprecision aftershock locations of the 2016-2017 central Italy sequence. Geophysical Research Letters, 48, e2021GL092918. https://doi.org/10.1029/2021GL092918
description: {"references": ["Waldhauser, F., Michele, M., Chiaraluce, L., Di Stefano, R., & Schaff, D. P. (2021). Fault planes, fault zone structure and detachment fragmentation resolved with high-precision aftershock locations of the 2016-2017 central Italy sequence. Geophysical Research Letters, 48, e2021GL092918. https://doi. org/10.1029/2021GL092918"]}