cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/vcv6pdztg7
title: UV and heat indexes in Mantang Island, Riau Islands

description: The dataset included the UV and heat indexes, averaged at 10-minute intervals from raw of a 1-minute UV and Heat Index of Wireless Weather Station (WWS), recorded from September 6 to October 6, 2023, in Mantang Island (0.772485oN, 104.544927oE), Riau Islands, Indonesia. The UV index was observed from the WWS ultra-violet sensor. The heat index was computed directly by the equipment from Instant Outside Temperature and Instant Outside Relative Humidity using a formulation from Steadman (1979) modified by US NWS/NOAA and Davis Instruments to increase the range of use. The dataset consisted of 4321 rows of averaged data labeled DateTime (local time), UVIndex, and HeatIndex.
DOI: 10.6084/m9.figshare.16674484.v1
title: YangEtAl2021_Dataset_ChineseFloodSeasonalityPaper

description: Middle day of annual maximum 7-day precipitation across mainland China, which is derived from CN05 rainfall product (A 0.25˚ daily gridded precipitation dataset interpolated from 2,416 meteorological stations).
DOI: 10.6084/m9.figshare.22251028.v6
title: EuDiS - A comprehensive database of the seed dispersal syndromes of the European flora

description: See detailed description in: Vargas, Heleno & Costa  (submitted) EuDiS - A comprehensive database of the seed dispersal syndromes of the European flora
<br>
Table structure: 
<strong>Species_Flora_Europaea: </strong>binomial from Flora Europaea
<strong>Species_POWO: </strong>binomial currently (as of 2022) accepted according to Plants of the World Online (https://powo.science.kew.org).
<strong>Family: </strong>botanical family of the respective species according to POWO.
<strong>Endozoochorous: </strong>coded as “1” when the species has diaspores with traits that facilitate internal dispersal by animals; coded as “0” otherwise.
<strong>Epizoochorous: </strong>coded as “1” when the species has diaspores with traits that facilitate external dispersal by animals; coded as “0” otherwise.
<strong>Thalassochorous: </strong>coded as “1” when the species has diaspores with traits that facilitate dispersal by transport on salt water; coded as “0” otherwise.
<strong>Anemochorous: </strong>coded as “1” when the species has diaspores with traits that facilitate dispersal by wind; coded as “0” otherwise.
<strong>Myrmecochorous: </strong>coded as “1” when the species has diaspores with traits that facilitate external dispersal by ants; coded as “0” otherwise.
<strong>Vertebrate_hoarding: </strong>coded as “1” when the species has diaspores with traits that facilitate dispersal by seed hoarding animals; coded as “0” otherwise.
<strong>Freshwater Hydrochorous: </strong>coded as “1” when the species has diaspores with traits that facilitate dispersal by fresh water; coded as “0” otherwise.
<strong>Ballochorous: </strong>coded as “1” when the species has traits that facilitate the dispersal by explosive mechanisms; coded as “0” otherwise.
<strong>Further_clarification_needed: </strong>marks specific syndromes whose classification is still doubtful or based on incomplete information and thus warrant further work: END: endozoochorous, EPI: epizoochorous, THA: thalassochorous, ANE: anemochorous, HYD: freshwater hydrochorous, MYR: myrmecochorous, BAL: ballochorous.  
<strong>Tree_or_shrub: </strong>coded as “1” when the species is a tree or a woody shrub; coded as “0” otherwise (herbaceous plants, climbers, and suffruticose chamaephytes).
<strong>Synonyms: </strong>binomials that were considered independent species in the volumes of Flora Europaea but are currently considered synonyms of the binomials listed in the field “Species_POWO”
<strong>References: </strong>sources used to code the syndromes.
DOI: 10.6084/m9.figshare.28342439.v1
title: The DSAT structure analysis dataset for 1981−2020 global TCs

description: Climate change has been linked to tropical cyclone (TC) poleward migration, TCextreme precipitation, and an increased proportion of major hurricanes. Understandingpast TC trends and variability is critical for projecting future TC impacts on humansociety. However, past trends in TC structure and energy remain uncertain due tolimited observations; subjection analyses and inherent spatiotemporal heterogeneity ofbest-track data have led to reduced confidence in the assessed TC responses to thechanging climate. The DSAT uses deep learning to reconstruct past "observations" andyield an objective global TC wind profile dataset during 1981‒2020, facilitating acomprehensive examination of TC intensity (Vmax), structure, and integrated kineticenergy (IKE). The proposed model converts multichannel satellite imagery to a 0-750-km wind profile of axisymmetric surface winds; it is trained based on labeled dataintegrating best tracks and numerical model reanalysis of 2004–2018 TCs.The DSAT model (Chen et al. 2025) features a hybrid GAN-CNN architecture (Chen B et al., 2021a), incorporating a generative adversarial network (GAN, Goodfellow et al., 2014) module and a polar convolutional neural network (CNN, Krizhevsky et al., 2012; Chen B et al., 2021b) regressor. The DSAT GAN module is trained to generate synthetic VIS images (VIS*) based on all-time available infrared (IR) and water vapor (WV) images, enabling the indirect take advantage of original VIS images to train the CNN regressor. On the other hand, the CNN regressor, employing a "polar-convolution filter" design (Chen B et al., 2021b), extracts essential features from satellite images and regresses these features to labeled wind profiles of azimuthally averaged winds.Chen, B. F., Chen, B., Hsiao, C. M., Teng, H. F., Lee, C. S., & Kuo. H. C. (2025). Constructing Deep Learning Datasets to Reveal Climate Trends of Tropical Cyclone Intensity and Structure Extremes. Artificial Intelligence for the Earth Systems (accepted with revision).<br>
DOI: 10.17632/7d9rm7yjxd
title: Universal Cointegration and Its Applications

description: Universal Cointegration and Its Applications
DOI: 10.6084/m9.figshare.26671491.v1
title: Additional file 7 of Multi-tissue metabolic and transcriptomic responses to a short-term heat stress in swine

description: Additional file 7. Table of kits for the measurement of blood metabolites and hormone levels.
DOI: 10.17632/p626bnw663
title: GMXPBSA 2.0: A GROMACS tool to perform MM/PBSA and computational alanine scanning

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract GMXPBSA 2.0 is a user-friendly suite of Bash/Perl scripts for streamlining MM/PBSA calculations on structural ensembles derived from GROMACS trajectories, to automatically calculate binding free energies for protein–protein or ligand–protein complexes. GMXPBSA 2.0 is flexible and can easily be customized to specific needs. Additionally, it performs computational alanine scanning (CAS) to study the effects of ligand and/or receptor alanine mutations on the free energy of binding. Calculations ... Title of program: GMXPBSA 2.0 Catalogue Id: AETQ_v1_0 Nature of problem Calculates the Molecular Mechanics (MM) data (Lennard-Jones and Coulomb terms) and the solvation energy terms (polar and nonpolar terms respectively) from an ensemble of structures derived from GROMACS molecular dynamics simulation trajectory. These calculations are performed for each single component of the simulated complex, including protein and ligand. In order to cancel out artefacts an identical grid setup for each component, including complex, protein and ligand, is required. Performs sta ... Versions of this program held in the CPC repository in Mendeley Data AETQ_v1_0; GMXPBSA 2.0; 10.1016/j.cpc.2014.06.019 AETQ_v1_1; GMXPBSA 2.1; 10.1016/j.cpc.2014.09.010
DOI: 10.6084/m9.figshare.10780820.v6
title: Phylogenetic Tree Tutorial Example Data

description: Data of the example datasets of the tutorial. The archive contains one two directories: one for each of the protocol shown in the tutorial.Protocol 1 contains the marker genes and the Multiple Sequence Alignments (MSA), as well as trees obtained from two reconstruction methods (IqTree and RaXML).Protocol 2 contains the OMA Standalone directory, the locally added genomes, the selected Orthologous Groups, and their MSA, as well as the trees from two reconstruction methods.The file Species_List.csv list the species used in the tutorial, as well as their corresponding species code.<br>
DOI: 10.17632/jgbbfw2tzk
title: Data from GCA article "Thermodynamic property estimations for aqueous primary, secondary, and tertiary alkylamines, benzylamines, and their corresponding aminiums across temperature and pressure are validated by measurements from experiments"

description: Abstract:
On Earth and beyond, organic chemistry often occurs in the presence of water within environments that deviate drastically from ambient conditions (25°C and 1 bar). Accurately predicting aqueous organic reaction pathways is crucial toward understanding planetary scale processes such as the cycling of elements crucial for life (e.g., carbon and nitrogen). Advanced thermodynamic modeling can be utilized to determine the favorability of various organic reactions based on geologically relevant ranges of temperature and pressure, as well as compositional variables (e.g., pH). However, data that would otherwise allow for a diversity of organic compounds and environmental conditions to be modeled are sparse and rarely tested with experiments, particularly with regard to organic-nitrogen compounds. In this work, we develop a framework to estimate thermodynamic properties at ambient conditions that can then be extrapolated across ranges of temperature and pressure for aqueous primary, secondary, and tertiary amines and aminiums (protonated amines), specifically those structures containing linear alkyl chains and benzyl functional groups. We also performed hydrothermal experiments (250°C, ~40 bar) involving reactions of methylamines to test our resulting thermodynamic models, and we compare our models for other alkylamines and benzylamines to previous empirical measurements from the literature. Specifically, we use existing thermodynamic data along with our estimates at ambient conditions in combination with a variety of existing extrapolation methods related to the revised Helgeson-Kirkham-Flowers (HKF) equations of state to generate temperature- and pressure-dependent predictions of acid dissociation constants (i.e., pKa values) that strongly agree with previous empirical measurements. We use similar methods to predict product distributions for reactions involving primary, secondary, and tertiary amines/aminiums, as well as ammonia/ammonium and corresponding alcohols whose collective distributions depend on reversible substitution reactions. Our predictions are in good agreement with our experimental results involving the methylamine reaction system as well as previous experiments involving the benzylamine reaction system, for which we also produced thermodynamic estimates involving benzyl alcohol. The agreement between independent theoretical predictions and experimental measurements suggests that our estimated properties can be applied to modeling amine chemistry in other experimental and natural aqueous systems that range in temperature and pressure, providing new tools for planetary exploration.
DOI: 10.17632/cxpc52bwhn
title: Imaging tumor lactate is feasible for identifying intermediate-risk prostate cancer patients with post-surgical biochemical recurrence

description: This is a supporting dataset for the manuscript 'Imaging tumor lactate is feasible for identifying intermediate-risk prostate cancer patients with post-surgical biochemical recurrence' (10.1073/pnas.2312261120).
DOI: 10.6084/m9.figshare.18972998.v1
title: Mites_litter_decomposition_dataset_24_01.xlsx

description: Impact of microclimatic conditions on soil mite (Mesostigmata) abundance, species richness and diversity and litter decomposition
DOI: 10.17632/h85yvs54j3
title: SLAM, a Mathematica interface for SUSY spectrum generators

description: Abstract We present and publish a Mathematica package, which can be used to automatically obtain any numerical MSSM input parameter from SUSY spectrum generators, which follow the SLHA standard, like SPheno, SOFTSUSY, SuSeFLAV or Suspect. The package enables a very comfortable way of numerical evaluations within the MSSM using Mathematica. It implements easy to use predefined high scale and low scale scenarios like mSUGRA or m h max and if needed enables the user to directly specify the input requ... Title of program: SLAM Catalogue Id: AERX_v1_0 Nature of problem Interfacing published spectrum generators for automated creation, saving and loading of SUSY particle spectra. Versions of this program held in the CPC repository in Mendeley Data AERX_v1_0; SLAM; 10.1016/j.cpc.2013.12.005 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.6084/m9.figshare.21814821.v1
title: 25. Individual files - comfortable speed

description: This folder contains the processed data from the 3D gait analysis measurement in 55 typically developing children walking at comfortable walking speed. This includes spatiotemporal parameters, joint angles, GRF, joint moment and joint power for every child, organized per walking speed. Data is generated by a private custom-made Matlab script for analyzing .mox data. Consider ‘26_Description_parameters’ for interpreting the data
DOI: 10.17632/dbymbhhpk9
title: American Sign Language (ASL) Fingerspelling dataset for Myo Sensor

description: This is the dataset used in the following publication. Please cite this publication if use this dataset: This work was published on the 2017 ACM IUI . @inproceedings{paudyal2016sceptre, title={Sceptre: a pervasive, non-invasive, and programmable gesture recognition technology}, author={Paudyal, Prajwal and Banerjee, Ayan and Gupta, Sandeep KS}, booktitle={Proceedings of the 21st International Conference on Intelligent User Interfaces}, pages={282--293}, year={2016}, organization={ACM} } @inproceedings{paudyal2017dyfav, title={Dyfav: Dynamic feature selection and voting for real-time recognition of fingerspelled alphabet using wearables}, author={Paudyal, Prajwal and Lee, Junghyo and Banerjee, Ayan and Gupta, Sandeep KS}, booktitle={Proceedings of the 22nd International Conference on Intelligent User Interfaces}, pages={457--467}, year={2017}, organization={ACM} } 9 users wore the Myo Armband and data was collected for 5s. for each letter of the alphabet. The first 8 columns contain data for the 8 EMG pods, the next 3 are for Accelerometer, the next 3 are for Gyroscope and the final 3are for Orientation (Roll, Pitch and Yaw)
DOI: 10.17632/gw76znr8bm
title: Data Set for the Prize-Collecting Covering Tour Problem

description: This dataset consist of 144 test problems derived from the traveling salesman problem (TSP) accessible at the TSPLIB repository.  The PRIZE is never satisfied with the collection of merely the prizes associated with the vertices from T, in order to avoid any instance of the PCCTP from becoming an instance of the covered tour problem (CTP).

The instances were given new names based on their TSPLIB names, with extra information about the subsets R, T, and W, as well as the proportion of the total PRIZE to be collected. The instance a280_R56_T168_W56_50}, for example, contains the following properties: the total number of vertices are 280,  56 of them are optional (R), 168 are mandatory (T), 56 must be covered (W), and 50% of the total prize must me covered.
DOI: 10.17632/s7wjzjrr8r
title: Data for: Microribbon-hydrogel Composite Scaffold Accelerates Cartilage Regeneration in vivo with Enhanced Mechanical Properties using Mixed Stem Cells and Chondrocytes

description: Quantitative data obtained during this project.
DOI: 10.17632/x2tn935zrz
title: Low-cost, open-source 3D printed antibody dispenser for development and small-scale production of lateral flow assay strips.

description: STL files and code for an open source antibody dispenser.
DOI: 10.6084/m9.figshare.16685680.v1
title: Mapping molecular subtype specific alterations in breast cancer brain metastases identifies clinically relevant vulnerabilities

description: Exome capture RNA sequencing was carried out on patient matched primary breast with brain metastatic tumour samples for 45 cases of breast cancer brain metastasis (N= 90 samples). WES DNA sequencing was carried out on 18 pairs and matched normals. Raw sequencing data for the paired primary and metastatic samples are not published openly in order to protect participant identities, but will be made available upon request and under regulatory compliance via a data usage agreement (DUA).<br><i>Data access:</i><i>For all data requests please contact:</i><i>lyoung@rcsi.ie</i>
DOI: 10.17632/75jcz72mvg
title: Data for: Changes in microbial composition on the crust by different air flow velocities and their effect on sensory properties of dry-aged beef

description: Research Data for "Changes in microbial composition on the crust by different air flow velocities and their effect on sensory properties of dry-aged beef" submitted to Meat Science by Lee et al.
DOI: 10.15468/dl.z773rj
title: Occurrence Download

description: A dataset containing 28221 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hedera hibernica Poit.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 28221 records from 201 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013004-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/g85h39wgpj
title: Corruption and gender (Dataset)

description: We use the rounds IV (2008/2009) and V (2012/2013) of the Business Environment and Enterprise Performance Surveys (BEEPS) jointly conducted by the European Bank for Reconstruction and Development (EBRD) and the World Bank.
DOI: 10.6084/m9.figshare.7940396.v1
title: gVCF_HG02787

description: 1000 Genomes gVCF mapped to hs37d5 for HG02787. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.17632/4659wrdhmr
title: Data for: Kimchi Premium and Speculative Trading in Bitcoin

description: The data used in this paper are collected from bitcoincharts.com over the period from January 2015 to September 2018. The variables contained in the data are daily high price, low price, closing price, average price, trading volume, and market capitalization. Exchanges are selected by data availability. We also use daily market capitalization data from coinmarketcap.com, and daily foreign exchange rate data from the Bank of Korea.
DOI: 10.17632/5ntp5xwg9c
title: Raw Data Childhood Epilepsy Surgery

description: Raw Data - Seizure outcomes of temporoparietooccipital and frontal disconnection in children with drug-resistant epilepsy
DOI: 10.6084/m9.figshare.23696895.v1
title: 100K

description: Scans at 100K
DOI: 10.6084/m9.figshare.28930181.v1
title: Oil tea

description: We have organized the TLS point cloud data of Camellia oleifera used in this study and will make it publicly available through the Figshare platform (DOI: 10.6084/m9.figshare.XXXXXX). The dataset includes:Raw TLS point cloud data (.las format)Processed canopy parameters (leaf area index, canopy volume, etc.)Corresponding yield measurement data
DOI: 10.17632/s2nz9p2xp4
title: Tuberculosis

description: Tuberculosis (TB) and diabetes mellitus (DM) are both important health issues, and the association between DM and TB may be the next challenge for global TB control worldwide, type 2 DM (T2DM) responsible for 90% of DM cases. Persons with diabetes have a significantly increased risk of active TB, which is two to three times higher than in persons without diabetes. The aim of this study was to determine the association between pulmonary tuberculosis (PTB) and T2DM among Sudanese patients and also to determine the association between hemoglobin A1c (HbA1c) percentage in diabetic patients and development of PTB and effect of duration of T2DM in developing PTB.

Materials and methods: A total of 120 sputum samples were collected from patients during 6 months in Ribat University Hospital, Khartoum, Sudan. Sixty of them were known type 2 diabetic patients categorized as study group and sixty were nondiabetic patients categorized as control group. Ziehl-Neelsen smear preparation and DNA were extracted from sputum for detection of Mycobacterium tuberculosis by polymerase chain reaction (PCR).

Results: Among the 120 sputum specimens, 72 (60%) were males and 48 (40%) were females. Fourteen (19.4%) males and 6 (12.5%) females had PTB, the difference was not statistically significant according to gender P = 0.229. According to treatment modalities, diabetic patients were treated with injectable insulin (36.7%), PCR positive was 4(33.3%) P value (0.853), oral hypoglycemic drugs (51.7%) PCR positive 7 (58.3%) P value (0.849) and dietary control (11.7%) PCR positive (1 (8.3%) P value (1.000) Were insignificant differences. The frequency of HbA1c of 58 patients with diabetes was 24 (41.4%) who had controlled DM (HbA1c level ≤ 6.5%) and 34 (58.6%) had uncontrolled DM. Of the 60 patients with diabetes, 12 had PTB with uncontrolled DM, with significant difference (P=0.000). The mean duration of diabetes mellitus was (6.92 years ± Std 6.801) and the frequency of diabetes mellitus in first 10 years was 47 (78.3%), in (11-20) years was 10 (16.7%) and in (21-30) years was 3 (5%), the PCR positive PTB showed 10(21.3%) for the first 10 years, (11-20) years was 2 (20%) and zero (0.0%) for (21-30) years, P-value (0.480) insignificant different.

Conclusions: In summary, we found consistent evidence for an increased risk of TB among patients with uncontrolled DM (high-level HbA1c).
DOI: 10.6084/m9.figshare.20651328.v1
title: Supplementary Material for: Long-Term Noninvasive Ventilation in Chronic Obstructive Pulmonary Disease: Association between Clinical Phenotypes and Survival

description: <b><i>Background:</i></b> Long-term noninvasive ventilation (LTNIV) is widely used in patients with chronic hypercapnic respiratory failure (CHRF) related to COPD. Prognosis of these patients is however poor and heterogenous. <b><i>Research Question:</i></b> In COPD patients under LTNIV for CHRF, is it possible to identify specific phenotypes which are predictive of probability of pursuing NIV and survival? <b><i>Study Design and Methods:</i></b> A latent class analysis was performed in a COPD population under LTNIV included in a comprehensive database of patients in the Geneva Lake area, to determine clinically relevant phenotypes. The observation period of this subgroup of COPD was extended to allow assessment of survival and/or pursuit of NIV for at least 2 years after inclusion. A logistic regression was conducted to generate an equation accurately attributing an individual patient to a defined phenotype. The identified phenotypes were compared on a series of relevant variables, as well as for probability of pursuing NIV or survival. A competitive risk analysis allowed to distinguish death from other causes of cessation of NIV. <b><i>Results:</i></b> Two phenotypes were identified: a “respiratory COPD” profile with very severe airway obstruction, a low or normal body mass index, and a low prevalence of comorbidities and a “systemic COPD” profile of obese COPDs with moderate airway obstruction and a high rate of cardiovascular and metabolic comorbidities. The logistic regression correctly classified 95.7% of patients studied. Probability of pursuing NIV and survival were significantly related to these phenotypes, with a poorer prognosis for “respiratory COPD.” Probability of death 5 years after implementing NIV was 22.3% (95% CI: 15.4–32.2) for “systemic COPD” versus 47.2% (37.4–59.6) for “respiratory COPD” (<i>p</i> = 0.001). <b><i>Conclusion:</i></b> The two distinct phenotypes of COPD under LTNIV for CHRF identified appear to be strongly related to prognosis and require further validation in other cohort studies.