cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/5zy-b3n-kxf
title: Berriasella

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rqk-q54-re0
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vpp-nry-haw
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/60q-ryc-k3m
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xm4-0pw-cny
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.2nym64
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asparagus setaceus",
 "Country is Marshall Islands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020187-250811113504898/datasets/export for details.
DOI: 10.3535/9wa-ylv-10t
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xmf-6g6-228
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8re-ayd-fvd
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1pe-jzx-ryq
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2hc-d8s-83h
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.5273kz
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003204-150410134957023/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mty9jo
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003205-150422101436696/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.najfuk
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003204-150721130643939/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sanpvu
title: Occurrence Download

description: A dataset containing 7333076 species occurrences available in GBIF matching the query:
{
 "or" : [
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Fossil"
 ]
}

 The dataset includes 7333076 records from 316 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003204-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fozzpt
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003206-150422101436696/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zdteux
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003205-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u4mr9b
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003206-150912100344238/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.anurvu
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003205-150721130643939/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4koumi
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003205-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11174254
title: Disclosing the TVR Prison Algorithm. Data and Formula
title: Fórmula y datos del algoritmo penitenciario español TVR
DOI: 10.15468/dl.tskqq0
title: Occurrence Download

description: A dataset containing 648162719 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 648162719 records from 13701 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003210-160509122628363/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w8a5dd
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coliiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-140 30,-130 30,-130 40,-140 40,-140 30))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025261-251009101135966/datasets/export for details.
DOI: 10.15468/dl.mhvskm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Casuariiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((120 30,130 30,130 40,120 40,120 30))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025263-251009101135966/datasets/export for details.
DOI: 10.6084/m9.figshare.8223890
title: Phmamm-1 (previously published as Astec-Pm1; Wild type <i>Phallusia mammillata</i> embryo, live SPIM imaging, stages 8-17)

description: <b>Phmamm-1 </b><b>(</b><b>previously published as Astec-Pm1</b><b>)</b><br><b>Organism: </b><i>Phallusia mammillata</i> (Phlebobranch ascidian)<br><br><b>Description:</b>This dataset contains live imaging data of embryonic development in <i>Phallusia mammillata</i>. The cell membranes were fluorescently labeled by microinjection of mRNA encoding PH-GFP into an unfertilized egg.<b>Imaging conditions:</b><br>The embryo was live imaged with a Luxendo MuVi-SPIM light-sheet microscope from the 64-cell stage (Tp1, St. 8) up to the initial tailbud stage (Tp180, St. 17). Acquisitions were performed over ~6 hours at 18 °C in artificial seawater (ASW, salinity: 38 ppt).<br><br><b>Temporal alignment:</b><br>Embryonic development in <i>Phallusia mammillata</i> shows natural variability in timing between individuals. To enable direct comparison across datasets, developmental time was normalized based on cell number. <b>Phmamm-8 was chosen as the reference embryo</b>, and Phmamm-1 was temporally aligned to it. In the normalized timeline, the acquisition of Phmamm-1 corresponds to a starting point (t0) of approximately <b>245 minutes post fertilization (tpf)</b>, with an effective acquisition interval of <b>1.46 minutes</b>. This temporal alignment was performed using the <b>ASCIDIAN package</b> (see documentation for details). This allows stage-by-stage comparison of Phmamm-1 with Phmamm-8 and the other ascidian embryo datasets.<br><b>Data processing:</b><br>Fusion of images from four angles, whole-cell segmentation and temporal registration to correct for embryo movement were performed using the ASTEC pipeline (detailed documentation available here).In version 2, cell identification and fate assignments were further refined using the ASCIDIAN package (documentation available here).<b>Dataset versions:</b>Guignard et al., 2020:Rawdata for 20 disctinct times points are provided in the raw.tar.gz.The four angle fusion images obtained using the ASTEC pipeline are shared in .inr format (fuse.tar.gz archive file).Whole cells were segmented using the ASTEC pipeline and shared in .inr format (post.tar.gz archive file).Surface meshes (.obj) povided in the mesh.tar.gz archive were produced using the VTK library and MeshLab.Individual cell geometric properties are shared in two different formats, .xml and .pkl (properties.tar.gz archive file).Biasuz et al., 2025 (v2):Four-angle fusion images (ASTEC pipeline), temporally registered to compensate for embryo movements, provided in .nii format (Phmamm-1-v2_intrareg_fuse_1.tar (Timepoints 1-96) and Phmamm-1-v2_intrareg_fuse_2.tar (Timepoints 97-180)).Whole-cell segmentation images, temporally registered, provided in .nii format (Phmamm-1-v2_intrareg_post.tar).Individual cell geometric and naming properties in .xml format (Phmamm-1-v2_properties.tar).For additional details about the .nii format, please refer to this resource.<br>
DOI: 10.6084/m9.figshare.8223890.v3
title: Phmamm-1 (previously published as Astec-Pm1; Wild type <i>Phallusia mammillata</i> embryo, live SPIM imaging, stages 8-17)

description: <b>Phmamm-1 </b><b>(</b><b>previously published as Astec-Pm1</b><b>)</b><br><b>Organism: </b><i>Phallusia mammillata</i> (Phlebobranch ascidian)<br><br><b>Description:</b>This dataset contains live imaging data of embryonic development in <i>Phallusia mammillata</i>. The cell membranes were fluorescently labeled by microinjection of mRNA encoding PH-GFP into an unfertilized egg.<b>Imaging conditions:</b><br>The embryo was live imaged with a Luxendo MuVi-SPIM light-sheet microscope from the 64-cell stage (Tp1, St. 8) up to the initial tailbud stage (Tp180, St. 17). Acquisitions were performed over ~6 hours at 18 °C in artificial seawater (ASW, salinity: 38 ppt).<br><br><b>Temporal alignment:</b><br>Embryonic development in <i>Phallusia mammillata</i> shows natural variability in timing between individuals. To enable direct comparison across datasets, developmental time was normalized based on cell number. <b>Phmamm-8 was chosen as the reference embryo</b>, and Phmamm-1 was temporally aligned to it. In the normalized timeline, the acquisition of Phmamm-1 corresponds to a starting point (t0) of approximately <b>245 minutes post fertilization (tpf)</b>, with an effective acquisition interval of <b>1.46 minutes</b>. This temporal alignment was performed using the <b>ASCIDIAN package</b> (see documentation for details). This allows stage-by-stage comparison of Phmamm-1 with Phmamm-8 and the other ascidian embryo datasets.<br><b>Data processing:</b><br>Fusion of images from four angles, whole-cell segmentation and temporal registration to correct for embryo movement were performed using the ASTEC pipeline (detailed documentation available here).In version 2, cell identification and fate assignments were further refined using the ASCIDIAN package (documentation available here).<b>Dataset versions:</b>Guignard et al., 2020:Rawdata for 20 disctinct times points are provided in the raw.tar.gz.The four angle fusion images obtained using the ASTEC pipeline are shared in .inr format (fuse.tar.gz archive file).Whole cells were segmented using the ASTEC pipeline and shared in .inr format (post.tar.gz archive file).Surface meshes (.obj) povided in the mesh.tar.gz archive were produced using the VTK library and MeshLab.Individual cell geometric properties are shared in two different formats, .xml and .pkl (properties.tar.gz archive file).Biasuz et al., 2025 (v2):Four-angle fusion images (ASTEC pipeline), temporally registered to compensate for embryo movements, provided in .nii format (Phmamm-1-v2_intrareg_fuse_1.tar (Timepoints 1-96) and Phmamm-1-v2_intrareg_fuse_2.tar (Timepoints 97-180)).Whole-cell segmentation images, temporally registered, provided in .nii format (Phmamm-1-v2_intrareg_post.tar).Individual cell geometric and naming properties in .xml format (Phmamm-1-v2_properties.tar).For additional details about the .nii format, please refer to this resource.<br>
DOI: 10.6084/m9.figshare.8223890.v2
title: Astec-Pm1 (Wild type Phallusia mammillata embryo, live SPIM imaging, stages 8-17)

description: Astec-Pm1 Live embryonic development of Phallusia mammillata 
(Phlebobranch ascidian). <br><br>Cell membranes were fluorescently labeled by 
microinjection of mRNA encoding PH-GFP into unfertilized egg. <br>The embryo
 has been live imaged with a MuVi-SPIM for six hours, from the 64-cell 
stage (Tp 1, St. 8) up to the initial tailbud (Tp 180, St. 17). <br><br>Whole 
cells were segmented using the ASTEC pipeline. Surface meshes were 
produced using the VTK library and MeshLab.<br><br>The period between time points is 89 seconds after normalization on the average development at 18°C.<br>* Rawdata for 20 disctinct times points are provided in the raw.tar.gz.<br>* The four angle fusion images obtained using the ASTEC pipeline are shared in .inr format (fuse.tar.gz archive file). <br>* Whole cells were segmented using the ASTEC pipeline and shared in .inr format (post.tar.gz archive file).<br>* Surface 
meshes (.obj) povided in the mesh.tar.gz archive were produced using the VTK library and MeshLab.<br>* Individual cell geometric properties are shared in two different formats, .xml and .pkl (properties.tar.gz archive file).
DOI: 10.25574/43752
title: Chandra X-ray Observatory ObsId 43752
DOI: 10.15468/dl.eajmqz
title: Occurrence Download

description: A dataset containing 29686 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Celtis occidentalis"
 ]
}

 The dataset includes 29686 records from 392 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025266-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15253620
title: GUTUM–C2: Carl Jung, Archetypes, and ψ(t) Mythic Fields

description: This Tier 3 Codex theory aligns Carl Jung’s psychological model of archetypes and the collective unconscious with GUTUM’s ψ(t)-based substrate framework. It reinterprets archetypes as symbolic resonance attractors—emergent harmonic fields within the ψ(t) manifold that guide recursive identity formation. Integrating synchronicity, shadow work, and individuation, the theory provides mathematical formalism for symbolic field activation, ψ-state modulation, and nodal integration across collective and individual timelines
DOI: 10.5281/zenodo.15253621
title: GUTUM–C2: Carl Jung, Archetypes, and ψ(t) Mythic Fields

description: This Tier 3 Codex theory aligns Carl Jung’s psychological model of archetypes and the collective unconscious with GUTUM’s ψ(t)-based substrate framework. It reinterprets archetypes as symbolic resonance attractors—emergent harmonic fields within the ψ(t) manifold that guide recursive identity formation. Integrating synchronicity, shadow work, and individuation, the theory provides mathematical formalism for symbolic field activation, ψ-state modulation, and nodal integration across collective and individual timelines
DOI: 10.15468/dl.benahj
title: Occurrence Download

description: A dataset containing 1328 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bonnemaisonia hamifera",
 "Country is Norway",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1328 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078246-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v6awtk
title: Occurrence Download

description: A dataset containing 2013 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Estrilda astrild)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 2013 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078248-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.snzyyg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Saccharum spontaneum",
 "Country is Samoa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078249-250717081556266/datasets/export for details.
DOI: 10.6084/m9.figshare.26780186
title: Dietary fructose: from uric acid to a metabolic switch in pediatric metabolic dysfunction-associated steatotic liver disease

description: Fructose consumption in pediatric subjects is rising, as the prevalence of metabolic dysfunction-associated steatotic liver disease (MASLD) and metabolic dysfunction-associated steatohepatitis (MASH). Despite increasing evidence supporting the detrimental effects of fructose in the development of Metabolic Syndrome (MetS) and its related comorbidities, the association between fructose intake and liver disease remains unclear, mainly in youths. The current narrative review aims to illustrate the correlation between fructose metabolism and liver functions besides its impact on obesity and MASLD in pediatrics. Fructose metabolism is involved in the liver through the classical lipogenic pathway <i>via</i> de novo lipogenesis (DNL) or in the alternative pathway <i>via</i> uric acid accumulation. Hyperuricemia is one of the main features of MALSD patients, underlining how uric acid is growing interest as a new marker of disease. Observational and interventional studies conducted in children and adolescents, who consumed large amounts of fructose and glucose in their diet, were included. Most of these studies emphasized the association between high fructose intake and weight gain, dyslipidemia, insulin resistance, and MASLD/MASH, even in normal-weight children. Conversely, reducing fructose intake ameliorates liver fat accumulation, lipid profile, and weight. In conclusion, fructose seems a potent inducer of both insulin resistance and hepatic fat accumulation.
DOI: 10.6084/m9.figshare.26780186.v1
title: Dietary fructose: from uric acid to a metabolic switch in pediatric metabolic dysfunction-associated steatotic liver disease

description: Fructose consumption in pediatric subjects is rising, as the prevalence of metabolic dysfunction-associated steatotic liver disease (MASLD) and metabolic dysfunction-associated steatohepatitis (MASH). Despite increasing evidence supporting the detrimental effects of fructose in the development of Metabolic Syndrome (MetS) and its related comorbidities, the association between fructose intake and liver disease remains unclear, mainly in youths. The current narrative review aims to illustrate the correlation between fructose metabolism and liver functions besides its impact on obesity and MASLD in pediatrics. Fructose metabolism is involved in the liver through the classical lipogenic pathway <i>via</i> de novo lipogenesis (DNL) or in the alternative pathway <i>via</i> uric acid accumulation. Hyperuricemia is one of the main features of MALSD patients, underlining how uric acid is growing interest as a new marker of disease. Observational and interventional studies conducted in children and adolescents, who consumed large amounts of fructose and glucose in their diet, were included. Most of these studies emphasized the association between high fructose intake and weight gain, dyslipidemia, insulin resistance, and MASLD/MASH, even in normal-weight children. Conversely, reducing fructose intake ameliorates liver fat accumulation, lipid profile, and weight. In conclusion, fructose seems a potent inducer of both insulin resistance and hepatic fat accumulation.
DOI: 10.60712/si-id6351.1
title: StrainInfo SI-ID 6351.1

description: StrainInfo dataset 6351 about a strain of Xanthomonas populi. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id6232.1
title: StrainInfo SI-ID 6232.1

description: StrainInfo dataset 6232 about a strain of Xanthomonas oryzae pv. oryzae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.