cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5553177
title: Extreme droughts in oligotrophic mountain grasslands cause substantial species abundance changes and amplify community filtering

description: Questions<br> Mountain grasslands can be strongly affected by extreme droughts such as those related to climate change. What are the impacts of extreme droughts on community composition, diversity, Ellenberg indicator scores and species groups in oligotrophic montane Nardus grasslands, and what are the associated mechanisms of vegetation change?<br> Location<br> Rhön Mountains, Germany<br> Methods<br> In three consecutive years, we investigated the effects of yearly droughts (April-August) in an experimental setup with rainout shelters. Due to the coincidence of ambient extreme dry conditions in those years and our artificial rainfall reduction, we evaluated the contribution to community change of ambient drought conditions and the treatments. We analysed community composition changes by applying redundancy analysis to species differences in comparison with the pre-treatment year, and used mixed-effects models to test for changes in community-weighted means of Ellenberg indicator scores, sociological, and functional groups.<br> Results<br> We found significant changes in species abundances and community structures in response to drought. Evenness increased, but species richness remained rather stable over time. Ellenberg indicator scores for temperature and nitrogen increased, while the score for moisture decreased. Simultaneously, dominant species declined and subdominants increased. Changes occurred with a time lag and were largely driven by the high ambient drought level and less by the artificial treatments.<br> Conclusions<br> Our results show that drought-related community composition changes in Nardus grasslands occur across community structures, characteristic species, and species groups. The post-drought recovery of the community is shaped by community filters, which particularly allow subdominants to take advantage of newly available niches in the matrix, even if they lack strong drought tolerance. Our findings indicate a certain resilience of the community to climate-change-related droughts, which suggests that the observed changes should not lead to an accelerated short-term decline of these grasslands, but that this cannot be excluded in the long term.<br>
DOI: 10.5281/zenodo.5553176
title: Extreme droughts in oligotrophic mountain grasslands cause substantial species abundance changes and amplify community filtering

description: Questions<br> Mountain grasslands can be strongly affected by extreme droughts such as those related to climate change. What are the impacts of extreme droughts on community composition, diversity, Ellenberg indicator scores and species groups in oligotrophic montane Nardus grasslands, and what are the associated mechanisms of vegetation change?<br> Location<br> Rhön Mountains, Germany<br> Methods<br> In three consecutive years, we investigated the effects of yearly droughts (April-August) in an experimental setup with rainout shelters. Due to the coincidence of ambient extreme dry conditions in those years and our artificial rainfall reduction, we evaluated the contribution to community change of ambient drought conditions and the treatments. We analysed community composition changes by applying redundancy analysis to species differences in comparison with the pre-treatment year, and used mixed-effects models to test for changes in community-weighted means of Ellenberg indicator scores, sociological, and functional groups.<br> Results<br> We found significant changes in species abundances and community structures in response to drought. Evenness increased, but species richness remained rather stable over time. Ellenberg indicator scores for temperature and nitrogen increased, while the score for moisture decreased. Simultaneously, dominant species declined and subdominants increased. Changes occurred with a time lag and were largely driven by the high ambient drought level and less by the artificial treatments.<br> Conclusions<br> Our results show that drought-related community composition changes in Nardus grasslands occur across community structures, characteristic species, and species groups. The post-drought recovery of the community is shaped by community filters, which particularly allow subdominants to take advantage of newly available niches in the matrix, even if they lack strong drought tolerance. Our findings indicate a certain resilience of the community to climate-change-related droughts, which suggests that the observed changes should not lead to an accelerated short-term decline of these grasslands, but that this cannot be excluded in the long term.<br>
DOI: 10.5517/ccdc.csd.cc26l331
title: CCDC 2043182: Experimental Crystal Structure Determination

description: Related Article: Daiki Koga, Toshikazu Ono, Hyuga Shinjo, Yoshio Hisaeda|2021|J.Phys.Chem.Lett.|12|10429|doi:10.1021/acs.jpclett.1c03020
DOI: 10.5517/ccdc.csd.cc26l364
title: CCDC 2043185: Experimental Crystal Structure Determination

description: Related Article: Daiki Koga, Toshikazu Ono, Hyuga Shinjo, Yoshio Hisaeda|2021|J.Phys.Chem.Lett.|12|10429|doi:10.1021/acs.jpclett.1c03020
DOI: 10.5517/ccdc.csd.cc26l386
title: CCDC 2043187: Experimental Crystal Structure Determination

description: Related Article: Daiki Koga, Toshikazu Ono, Hyuga Shinjo, Yoshio Hisaeda|2021|J.Phys.Chem.Lett.|12|10429|doi:10.1021/acs.jpclett.1c03020
DOI: 10.5517/ccdc.csd.cc28jkv7
title: CCDC 2101299: Experimental Crystal Structure Determination

description: Related Article: Huiyeong Ju, Yoichi Habata, Jong Hwa Jung, Shim Sung Lee|2021|Cryst.Growth Des.|21|6992|doi:10.1021/acs.cgd.1c00914
DOI: 10.5517/ccdc.csd.cc28jkzc
title: CCDC 2101303: Experimental Crystal Structure Determination

description: Related Article: Huiyeong Ju, Yoichi Habata, Jong Hwa Jung, Shim Sung Lee|2021|Cryst.Growth Des.|21|6992|doi:10.1021/acs.cgd.1c00914
DOI: 10.5517/ccdc.csd.cc28jl0f
title: CCDC 2101304: Experimental Crystal Structure Determination

description: Related Article: Huiyeong Ju, Yoichi Habata, Jong Hwa Jung, Shim Sung Lee|2021|Cryst.Growth Des.|21|6992|doi:10.1021/acs.cgd.1c00914
DOI: 10.25345/c5b29q
title: MassIVE MSV000088503 - Mouse renal proteome in the presence of a modified polyspecific antivenom
title: Heterologous antivenoms have been used successfully for over a century and so far, they are the only effective treatment for snakebites. Having proven their effectiveness, they still face problems related to formulation (liquid or lyophilized), stability and storage, factors that vary in certain regions of the world where they are used. Thus, the improvements in its quality must be aimed at obtaining a stable, durable and easy-to-storage product, which implies in the formulation and manufacturing practices. We evaluated the proteomic changes in mouse kidneys in the presence of a polyspecific antivenom from Central America that carries a disaccharide in its formulation, thus observing the implications or changes at the renal level.
DOI: 10.5281/zenodo.5752411
title: Accuracy Study and Improvement of Network Simulation in the SimGrid Framework (datasets)

description: Data sets and code for https://hal.inria.fr/inria-00361031 and the Rescience replication.
DOI: 10.25345/c56k4r
title: MassIVE MSV000088504 - Drought severity gradient affects root exudate composition in blue grama
title: GC-MS, FT-ICR MS, and NMR data from Bouteloua gracilis from three drought treatments (control, mild, and severe).
DOI: 10.5281/zenodo.5752511
title: Lithologic Compilation of Basins Sampled for Cosmogenic 10Be in the Greater Caucasus Mountains

description: Document ('Litho_Compilation.pdf') describing the geologic map compilation process for areas covering a suite of catchments sampled for cosmogenic 10Be within the Greater Caucasus Mountains. A shapefile ('mapunits.shp') which includes these mapped regions is provided.
DOI: 10.5281/zenodo.5752510
title: Lithologic Compilation of Basins Sampled for Cosmogenic 10Be in the Greater Caucasus Mountains

description: Document ('Litho_Compilation.pdf') describing the geologic map compilation process for areas covering a suite of catchments sampled for cosmogenic 10Be within the Greater Caucasus Mountains. A shapefile ('mapunits.shp') which includes these mapped regions is provided.
DOI: 10.5285/ca60bfec-9070-4967-920e-0c42554ad649
title: Counts of South Georgia shag Leucocarbo [atriceps] georgianus nests at Signy Island, South Orkney Islands, from 1947-2020

description: South Georgia shag Leucocarbo [atriceps] georgianus nest counts from two breeding colonies (North Point and Shagnasty Island) at Signy Island, South Orkney Islands from 1947-2020. Chick counts are also recorded at North Point.
description: Observational data is collected as part of a long term population monitoring initiative carried out over multiple decades. The data is gathered following standard ground survey methods at the two South Georgia shag colony areas present on Signy Island: North Point and Shagnasty Island. South Georgia shag pair numbers and chick numbers are recorded at North Point, and pair numbers are recorded at Shagnasty Island. Data has been collected by a number of different observers, who are listed with the count data. A minimum of two experienced observers survey each colony area at least twice on the same day. Surveys are repeated until the two count totals are within 10%. The mean count value is then calculated and presented. To count pair numbers, nests at which an adult appeared to be incubating (occupied nests) are counted. Nests are observed either peripherally (from edge areas of each colony), or from a nearby vantage point (30-50 m away, using binoculars). At North Point, past counts varied where sometimes the number of adult birds were counted, and sometimes total number of nests. In earlier counts, the date of the count is not always known, and earlier counts were typically done earlier in the season than is standard now. Since 1997/98, all counts have been of nests. Since 1988/89, all nest counts were undertaken between 23rd November and 19th January. Chick counts are also undertaken at the North Point colony. Some earlier chick counts report the number of chicks that were ringed and is therefore a minimum number of chicks, as the original report does not state whether all chicks were ringed. Notes with the data indicate what was counted, where it was possible to ascertain this information from the original report. Chick count dates vary year-on-year, and some may be a count of eggs that have hatched and others the chicks that have survived almost to fledging. Since 1996/97, chick counts have taken place between 6th January and 6th February to count chick survival to fledging, which occurs January - February each year. No chick counts have been undertaken at the Shagnasty colony, due to difficulties in accessing the colony. This data has been collected by British Antarctic Survey (BAS) researchers as part of an on-going BAS long-term population monitoring programme to determine population size and breeding success trajectories.
description: Differences in the methods are specified under Comments in the data.
DOI: 10.5281/zenodo.5752526
title: SCAI-QReCC

description: Results of the shared task on conversational question answering SCAI-QReCC 2021
DOI: 10.5281/zenodo.5752517
title: Excel TOP estudiantes-nota media

description: Datos de nombres de estudiantes junto con su nota media.
DOI: 10.5281/zenodo.5752516
title: Excel TOP estudiantes-nota media

description: Datos de nombres de estudiantes junto con su nota media.
DOI: 10.5281/zenodo.3963790
title: Paracoherent Answer Set Computation

description: Instances used for the experiments of the paper "Paracoherent Answer Set Computation".
DOI: 10.5281/zenodo.3963789
title: Paracoherent Answer Set Computation

description: Instances used for the experiments of the paper "Paracoherent Answer Set Computation".
DOI: 10.5281/zenodo.5752558
title: How Creatively Are We Teaching and Assessing Creativity in Computing Education: A Systematic Literature Review

description: Data from: Wouter Groeneveld, Brett A. Becker, and Joost Vennekens. 2022. How Creatively Are We Teaching and Assessing Creativity in Computing Education: A Systematic Literature Review. In Proceedings of the 53rd ACM Technical Symposium on Computer Science Education V. 1 (SIGCSE 2022),March 3–5, 2022, Providence, RI, USA. ACM, New York, NY, USA, 7 pages. https://doi.org/10.1145/3478431.349936 <strong>When referring to this dataset, please cite the above article. That contains the DOI of this dataset. Please do not cite this dataset directly without citing the article.</strong>
DOI: 10.5281/zenodo.5752542
title: SCAI-QReCC

description: Results of the shared task on conversational question answering SCAI-QReCC 2021
DOI: 10.5287/bodleian:qmzkjxayz
title: Supplementary data to "Options for reforming agricultural subsidies from health, climate, and economic perspectives"
DOI: 10.15468/ydwuc5
title: New species and records of Lycoriella Frey (Diptera, Sciaridae) from the Holarctic region

description: This dataset contains the digitized treatments in Plazi based on the original journal article Menzel, Frank, Vilkamaa, Pekka (2021): New species and records of Lycoriella Frey (Diptera, Sciaridae) from the Holarctic region. Zootaxa 5072 (6): 501-530, DOI: https://doi.org/10.11646/zootaxa.5072.6.1
DOI: 10.6084/m9.figshare.17122541
title: PRISMA NS Checklist.pdf

description: PRISMA 2020 Checklist for Comparison of Clinical Outcome in Hematological Cancer Compared to Primary Solid Cancer Patients With COVID-19 Infection: a Systematic Review and Meta-Analysis
DOI: 10.6084/m9.figshare.17122541.v1
title: PRISMA NS Checklist.pdf

description: PRISMA 2020 Checklist for Comparison of Clinical Outcome in Hematological Cancer Compared to Primary Solid Cancer Patients With COVID-19 Infection: a Systematic Review and Meta-Analysis
DOI: 10.15468/m7knv4
title: Morphological and molecular characterization of two species of Gelidium (Gelidiales, Rhodophyta) from Mexico: G. nayaritense sp. nov. and the new record of G. sanyaense

description: This dataset contains the digitized treatments in Plazi based on the original journal article Quiroz-González, Nataly, Ponce-Márquez, Ma. Edith, López-Gómez, Norma, Rodríguez, Dení (2021): Morphological and molecular characterization of two species of Gelidium (Gelidiales, Rhodophyta) from Mexico: G. nayaritense sp. nov. and the new record of G. sanyaense. Phytotaxa 527 (3): 161-176, DOI: 10.11646/phytotaxa.527.3.1
DOI: 10.6084/m9.figshare.16670498
title: Cytokinesis-block micronucleus assay performed in 0 and 2 Gy irradiated whole blood and isolated PBMCs in a six-well transwell co-culture system

description: Cytokinesis-block micronucleus (CBMN) assay in cytogenetic biodosimetry uses micronucleus (MN) frequency scored in binucleated cells (BNC) for dose estimation. Cell-cycle progression parameters of nuclear division index (NDI) and percentage of BNC (% BNC) are also evaluated. Whole blood (WB) or peripheral mononuclear cells (PBMCs) isolated from WB can be used for lymphocyte culture. Previously, 2 Gy PBMCs showed higher NDI and lower MN frequency than WB in 15 ml polypropylene tube single cultures. In this follow-up study, we wanted to assess if soluble factors present in WB but absent in PBMCs could increase MN frequency or decrease NDI in PBMCs co-cultured with WB. Peripheral blood from four healthy donors (two males: 25, 51; two females: 23, 26 years old) was irradiated with X-ray at 1 Gy/min. CBMN assay was performed with different combinations of 0 and 2 Gy WB and PBMC (WB, WB-IR, PBMC, PBMC-IR) mono- and co-cultures in a polystyrene six-well plate. Co-cultures were separated by 0.4 µm transwell inserts. Log2 fold changes and values of NDI, % BNC and MN frequency analyzed by three scorers were obtained. As upper and lower wells of the same culture condition showed some significant differences, wells of the same level were compared. NDI of PBMCs increased when PBMC or PBMC-IR was co-cultured with WB or WB-IR, respectively, as compared to mono-cultures. There was no increase in PBMC-IR’s MN frequency when co-cultured with WB or WB-IR. MN frequency was consistently higher in WB-IR than PBMC-IR in both mono- and co-cultures. NDI, % BNC and MN frequency were similar when WB or PBMC were co-cultured with PBMC-IR or WB-IR, respectively. Significantly lower NDI and % BNC, and higher MN frequency were also seen in some conditions of 15 ml cultures than six-well mono-cultures. Instead of the hypothesized decrease in NDI and increase in MN frequency, our co-culture set-up showed that in the absence of direct cell–cell interaction, soluble factors in WB increased NDI but not MN frequency in PBMCs. Moreover, radiation-induced bystander effects could not be observed. As the type of cell culture (WB, PBMC) and culture vessels could influence NDI and MN frequency, CBMN culture protocols should be kept consistent for dose–response calibration curve construction and dose estimation.
DOI: 10.6084/m9.figshare.16622498
title: Further development of spinal cord retreatment dose estimation: including radiotherapy with protons and light ions

description: A graphical user interface (GUI) was developed to aid in the assessment of changes in the radiation tolerance of spinal cord/similar central nervous system tissues with time between two individual treatment courses. The GUI allows any combination of photons, protons (or ions) to be used as the initial, or retreatment, radiotherapy courses. Allowances for clinical circumstances, of reduced tolerance, can also be made. The radiobiological model was published previously and has been incorporated with additional checks and safety features, to be as safe to use as possible. The proton option includes use of a fixed RBE of 1.1 (set as the default), or a variable RBE, the latter depending on the proton linear energy transfer (LET) for organs at risk. This second LET-based approach can also be used for ions, by changing the LET parameters. GUI screenshots are used to show the input and output parameters for different clinical situations used in worked examples. The results from the GUI are in agreement with manual calculations, but the results are now rapidly available without tedious and error-prone manual computations. The software outputs provide a maximum dose limit boundary, which should not be exceeded. Clinicians may also choose to further lower the number of treatment fractions, whilst using the same dose per fraction (or conversely a lower dose per fraction but with the same number of fractions) in order to achieve the intended clinical benefit as safely as possible. The new GUI will allow scientific-based estimations of time related radiation tolerance changes in the spinal cord and similar central nervous tissues (optic chiasm, brainstem), which can be used to guide the choice of retreatment dose fractionation schedules, with either photons, protons or ions.
DOI: 10.6084/m9.figshare.16622498.v3
title: Further development of spinal cord retreatment dose estimation: including radiotherapy with protons and light ions

description: A graphical user interface (GUI) was developed to aid in the assessment of changes in the radiation tolerance of spinal cord/similar central nervous system tissues with time between two individual treatment courses. The GUI allows any combination of photons, protons (or ions) to be used as the initial, or retreatment, radiotherapy courses. Allowances for clinical circumstances, of reduced tolerance, can also be made. The radiobiological model was published previously and has been incorporated with additional checks and safety features, to be as safe to use as possible. The proton option includes use of a fixed RBE of 1.1 (set as the default), or a variable RBE, the latter depending on the proton linear energy transfer (LET) for organs at risk. This second LET-based approach can also be used for ions, by changing the LET parameters. GUI screenshots are used to show the input and output parameters for different clinical situations used in worked examples. The results from the GUI are in agreement with manual calculations, but the results are now rapidly available without tedious and error-prone manual computations. The software outputs provide a maximum dose limit boundary, which should not be exceeded. Clinicians may also choose to further lower the number of treatment fractions, whilst using the same dose per fraction (or conversely a lower dose per fraction but with the same number of fractions) in order to achieve the intended clinical benefit as safely as possible. The new GUI will allow scientific-based estimations of time related radiation tolerance changes in the spinal cord and similar central nervous tissues (optic chiasm, brainstem), which can be used to guide the choice of retreatment dose fractionation schedules, with either photons, protons or ions.
DOI: 10.6084/m9.figshare.16622498.v2
title: Further development of spinal cord retreatment dose estimation: including radiotherapy with protons and light ions

description: A graphical user interface (GUI) was developed to aid in the assessment of changes in the radiation tolerance of spinal cord/similar central nervous system tissues with time between two individual treatment courses. The GUI allows any combination of photons, protons (or ions) to be used as the initial, or retreatment, radiotherapy courses. Allowances for clinical circumstances, of reduced tolerance, can also be made. The radiobiological model was published previously and has been incorporated with additional checks and safety features, to be as safe to use as possible. The proton option includes use of a fixed RBE of 1.1 (set as the default), or a variable RBE, the latter depending on the proton linear energy transfer (LET) for organs at risk. This second LET-based approach can also be used for ions, by changing the LET parameters. GUI screenshots are used to show the input and output parameters for different clinical situations used in worked examples. The results from the GUI are in agreement with manual calculations, but the results are now rapidly available without tedious and error-prone manual computations. The software outputs provide a maximum dose limit boundary, which should not be exceeded. Clinicians may also choose to further lower the number of treatment fractions, whilst using the same dose per fraction (or conversely a lower dose per fraction but with the same number of fractions) in order to achieve the intended clinical benefit as safely as possible. The new GUI will allow scientific-based estimations of time related radiation tolerance changes in the spinal cord and similar central nervous tissues (optic chiasm, brainstem), which can be used to guide the choice of retreatment dose fractionation schedules, with either photons, protons or ions.
DOI: 10.15468/zwf7px
title: New species of Rineloricaria (Siluriformes: Loricariidae) from the Paranaíba River basin, Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Costa-Silva, Guilherme José Da, Oliveira, Claudio, Costa, Gabriel De Souza Da (2021): New species of Rineloricaria (Siluriformes: Loricariidae) from the Paranaíba River basin, Brazil. Zootaxa 5072 (6): 531-540, DOI: https://doi.org/10.11646/zootaxa.5072.6.2
DOI: 10.3886/e155541
title: NHB_OblojZenger

description: InequityInequality_NHB provides code executed on NHB_OblojZenger_2021. name gender map provides a list of first names along with respective dichotomous gender coding. <br>
DOI: 10.3886/e155541v1
title: NHB_OblojZenger

description: InequityInequality_NHB provides code executed on NHB_OblojZenger_2021. name gender map provides a list of first names along with respective dichotomous gender coding. <br>