cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/2n4c4whv2f
title: Türk Göç Politikası Veri Tabanı

description: Bu veri seti, Türkiye'nin göç politikasının analizi çerçevesinde toplanmış kapsamlı bir istatistiksel, hukuki ve sosyolojik materyal tabanıdır. Veri setinin amacı, Türkiye'deki göç süreçlerinin tarihsel evrimini ve mevcut durumunu analiz etmek isteyen araştırmacılara hazır bir ampirik temel sunmaktır. Veri tabanı, 19. yüzyıl Osmanlı İmparatorluğu'ndaki temel demografik süreçlerden başlayarak 2023 yılına kadar uzanan geniş bir kronolojik dönemi kapsamaktadır.

Tarihsel-Demografik Bağlam (Ek A-D, R): Bu blok, Osmanlı İmparatorluğu ve Türkiye Cumhuriyeti'nin resmi nüfus sayımlarından elde edilen sayısallaştırılmış verileri içerir. Tablolar, yabancı uyruklu kişi sayısı, mülteci ve göçmen akınlarının dinamikleri (Balkanlar, Kafkasya ve Kırım'dan gelen tarihsel dalgalar dahil) ile erken Cumhuriyet döneminde (1927–1965) nüfusun anadil ve dini aidiyete göre dağılımına ilişkin özgün verileri barındırır. Ek R, Türkiye'deki modern demografik değişimleri 2023 yılına kadar göstermektedir.

Normatif-Hukuki Çerçeve (Ek F, H): Bu bölümde göç politikasının hukuki temeli sistematik hale getirilmiştir. Ek F, Türk soylu göçmenlerin, mültecilerin statüsünü, vatandaşlık kazanma kurallarını, yabancıların işgücü piyasasına erişimini düzenleyen kilit kanunların yanı sıra yasal/düzensiz göç ve sınır kontrolüne ilişkin yasaların kronolojik bir listesini içerir. Ek H, Türkiye'nin ikamet ve seyahat alanında imzaladığı ikili anlaşmaların bir listesiyle bu tabloyu tamamlar.

Modern Yasal Göç İstatistikleri (Ek G, I): Bu bölüm, ağırlıklı olarak 2005'ten 2023'e kadar olan dönemi kapsayan yasal göç süreçlerine ilişkin ayrıntılı istatistikler sunar. Türkiye'nin vize politikası, ülkeye giriş-çıkış sayıları, verilen ikamet izinleri (öğrenci, aile, çalışma vb. türlere göre) ve çalışma izinlerine ilişkin verileri içerir. Veriler, dinamik bir şekilde ve vatandaşlık bazında (ilk 10 uyruk) sunulmuştur. Ayrıca 1930'dan 2009'a kadar vatandaşlığa kabul ve vatandaşlıktan çıkma istatistikleri de dahildir.

Düzensiz Göç ve Uluslararası Koruma (Ek J, K): Bu blokta, yakalanan düzensiz göçmenlerin uyruklarına göre istatistikleri, insan kaçakçılığı vakaları ve sınır dışı etme prosedürlerine ilişkin veriler toplanmıştır. Sahil Güvenlik Komutanlığı'nın verileri ayrıca sunulmaktadır. Ek K, uluslararası koruma başvurularının sayısını ve bu başvurulara ilişkin kabul oranlarını içerir.

Sosyal Entegrasyon ve Hizmetlere Erişim (Ek L, M, N, O, P): Bu geniş bölüm, göçün sosyo-ekonomik sonuçlarına odaklanmıştır. İçeriğinde; sosyal entegrasyon ("Suriye Barometresi" gibi kamuoyu araştırmalarından elde edilen karşılıklı algı ve adaptasyon verileri), eğitim (Suriyeli mülteciler ve devlet burslu yabancı öğrenciler dahil olmak üzere yabancıların okullaşma oranları), adalet (Türkiye'deki ceza infaz sisteminde yabancıların durumu) ve işgücü piyasası (verilen çalışma izinlerinin eğitim düzeyi, cinsiyet ve uyruğa göre ayrıntılı istatistikleri) bulunmaktadır.
DOI: 10.17632/2n4c4whv2f.1
title: Türk Göç Politikası Veri Tabanı

description: Bu veri seti, Türkiye'nin göç politikasının analizi çerçevesinde toplanmış kapsamlı bir istatistiksel, hukuki ve sosyolojik materyal tabanıdır. Veri setinin amacı, Türkiye'deki göç süreçlerinin tarihsel evrimini ve mevcut durumunu analiz etmek isteyen araştırmacılara hazır bir ampirik temel sunmaktır. Veri tabanı, 19. yüzyıl Osmanlı İmparatorluğu'ndaki temel demografik süreçlerden başlayarak 2023 yılına kadar uzanan geniş bir kronolojik dönemi kapsamaktadır.

Tarihsel-Demografik Bağlam (Ek A-D, R): Bu blok, Osmanlı İmparatorluğu ve Türkiye Cumhuriyeti'nin resmi nüfus sayımlarından elde edilen sayısallaştırılmış verileri içerir. Tablolar, yabancı uyruklu kişi sayısı, mülteci ve göçmen akınlarının dinamikleri (Balkanlar, Kafkasya ve Kırım'dan gelen tarihsel dalgalar dahil) ile erken Cumhuriyet döneminde (1927–1965) nüfusun anadil ve dini aidiyete göre dağılımına ilişkin özgün verileri barındırır. Ek R, Türkiye'deki modern demografik değişimleri 2023 yılına kadar göstermektedir.

Normatif-Hukuki Çerçeve (Ek F, H): Bu bölümde göç politikasının hukuki temeli sistematik hale getirilmiştir. Ek F, Türk soylu göçmenlerin, mültecilerin statüsünü, vatandaşlık kazanma kurallarını, yabancıların işgücü piyasasına erişimini düzenleyen kilit kanunların yanı sıra yasal/düzensiz göç ve sınır kontrolüne ilişkin yasaların kronolojik bir listesini içerir. Ek H, Türkiye'nin ikamet ve seyahat alanında imzaladığı ikili anlaşmaların bir listesiyle bu tabloyu tamamlar.

Modern Yasal Göç İstatistikleri (Ek G, I): Bu bölüm, ağırlıklı olarak 2005'ten 2023'e kadar olan dönemi kapsayan yasal göç süreçlerine ilişkin ayrıntılı istatistikler sunar. Türkiye'nin vize politikası, ülkeye giriş-çıkış sayıları, verilen ikamet izinleri (öğrenci, aile, çalışma vb. türlere göre) ve çalışma izinlerine ilişkin verileri içerir. Veriler, dinamik bir şekilde ve vatandaşlık bazında (ilk 10 uyruk) sunulmuştur. Ayrıca 1930'dan 2009'a kadar vatandaşlığa kabul ve vatandaşlıktan çıkma istatistikleri de dahildir.

Düzensiz Göç ve Uluslararası Koruma (Ek J, K): Bu blokta, yakalanan düzensiz göçmenlerin uyruklarına göre istatistikleri, insan kaçakçılığı vakaları ve sınır dışı etme prosedürlerine ilişkin veriler toplanmıştır. Sahil Güvenlik Komutanlığı'nın verileri ayrıca sunulmaktadır. Ek K, uluslararası koruma başvurularının sayısını ve bu başvurulara ilişkin kabul oranlarını içerir.

Sosyal Entegrasyon ve Hizmetlere Erişim (Ek L, M, N, O, P): Bu geniş bölüm, göçün sosyo-ekonomik sonuçlarına odaklanmıştır. İçeriğinde; sosyal entegrasyon ("Suriye Barometresi" gibi kamuoyu araştırmalarından elde edilen karşılıklı algı ve adaptasyon verileri), eğitim (Suriyeli mülteciler ve devlet burslu yabancı öğrenciler dahil olmak üzere yabancıların okullaşma oranları), adalet (Türkiye'deki ceza infaz sisteminde yabancıların durumu) ve işgücü piyasası (verilen çalışma izinlerinin eğitim düzeyi, cinsiyet ve uyruğa göre ayrıntılı istatistikleri) bulunmaktadır.
DOI: 10.15468/dl.2psbwc
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Accipiter nisus)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034076-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xgp8wj
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Accipiter nisus)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034077-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xmebmh
title: Occurrence Download

description: A dataset containing 7120 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oenothera stricta"
 ]
}

 The dataset includes 7120 records from 293 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034073-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/v2925wd559
title: Untargeted global metabolomic profiling across the 24-hour day in mouse liver under three different feeding paradigms: Nighttime feeding, Arrhythmic feeding and Arrhythmic feeding with AZD8055 administration at night
DOI: 10.17632/v2925wd559.1
title: Untargeted global metabolomic profiling across the 24-hour day in mouse liver under three different feeding paradigms: Nighttime feeding, Arrhythmic feeding and Arrhythmic feeding with AZD8055 administration at night
DOI: 10.15468/dl.xmegcx
title: Occurrence Download

description: A dataset containing 1265 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phalaris canariensis",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1265 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034078-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/vnbkh1
title: 2009-EGG-PL-0501-Horba.ogg

description: Enregistrement audio en version originale polonaise
DOI: 10.57745/pvxfkp
title: 2009-EGG-PL-0503-Horba.ogg

description: Enregistrement audio en polonais avec interprétation en anglais, interprète/traducteur : Jan Krotki
DOI: 10.57745/qvl7sv
title: 2009-EGG-PL-0502-Horba.ogg

description: Interprétation en anglais, interprète/traducteur : Jan Krotki
DOI: 10.57745/cjgghm
title: Entretien avec Kazimierz Horba. Histoire de vie et expériences de déportation en URSS

description: Cet entretien a eu lieu le 21 avril 2009 à Białystok, Pologne, dans la salle de réunion de l’hospice privé Opatrzności Bożej. Il a été mené par Agnieszka Niewiedzial, avec la participation de Marc Fichet (technicien son, RFI) qui s'occupait de l'enregistrement. L'entretien a été réalisé en polonais et traduit et interprété en anglais. Il a duré 1 heure.
DOI: 10.57745/xrh4lz
title: Supplementary table 2 - Relative accumulation of Arabidopsis thaliana specialized metabolites during seed development under heat stress and control conditions (LC-MS-MS)

description: Data are showed for the six seed developmental stages (Globular, Transition, Torpedo, Bent cotyledon, Mature green and Dry seed), the two conditions of development (Heat stress [Str] and Control [Ctr]) and biological replicates (1, 2, 3) considered in this study. The Quality Control (QC) samples consisted in a mix of all the samples considered in the analyses which was injected several times accross the LC-MS/MS run analysis to evaluate the quality of the data.
DOI: 10.57745/zhyrdb
title: Supplementary table 3 - Normalized read counts of gene expression.

description: Five seed developmental stages (Globular, Transition, Torpedo, Bent cotyledon and Mature green) developped in two different temperature conditions (Heat stress : 27°C/24°C and Control : 21°C/19°C) were used. Three biological replicates per sample were used.
DOI: 10.57745/aqs0at
title: Supplementary table 1 - Annotation and information of Arabidopsis thaliana seed specialized metabolome

description: Identification (ID), Ionization mode (ESI), m/z (mass/charge), Retention Time (RT), Molecular Network clusters, Metabolic category (based on molecular network clusters and annotation based on standards and according to public databases), and source of the annotation are indicated for each metabolite, QC variation (variation of the considered metabolite accross quality control sample)
DOI: 10.57745/x1otac
title: Supplementary table 4 - Statistical analysis on transcriptomic data

description: In order to evaluate the individual effects of the seed developmental stage (Globular, Transition, Torpedo, Bent cotyledon and Mature green), and development condition (Heat stress : 27°C/24°C and Control : 21°C/19°C) on gene expression, a multifactorial analysis was conducted using the multifactor designs method of the DEseq2 R package (Love et al., 2014)( https://bioconductor.org/packages/release/bioc/html/DESeq2.html). This method evaluates the weight of each factor considered in the analysis and its impact on differentially expressed genes (DEGs), according to a false discovery rate (FDR)-adjusted p-value &lt;0.05.
DOI: 10.57745/tr8xxj
title: ui.R

description: 1) Open the four R script files ("filtering_functions_gc.R", "ui.R", "server.R" and "app.R"). 
2) Run the scripts "filtering_functions_gc.R", "ui.R" and "app.R".
3) Run the script "server.R" .
4) Enter your ESI + and ESI - files in a .csv (sep ;) file with the following structure : metabolic feature ID; row m/z; row retention time; Blank accumulation; QC(s) accumulation(s); Samples accumulations, in the window that appears after running "server.R" script.
DOI: 10.57745/ukubqx
title: app.R

description: 1) Open the four R script files ("filtering_functions_gc.R", "ui.R", "server.R" and "app.R"). 
2) Run the scripts "filtering_functions_gc.R", "ui.R" and "app.R".
3) Run the script "server.R" .
4) Enter your ESI + and ESI - files in a .csv (sep ;) file with the following structure : metabolic feature ID; row m/z; row retention time; Blank accumulation; QC(s) accumulation(s); Samples accumulations, in the window that appears after running "server.R" script.
DOI: 10.57745/myomum
title: server.R

description: 1) Open the four R script files ("filtering_functions_gc.R", "ui.R", "server.R" and "app.R"). 
2) Run the scripts "filtering_functions_gc.R", "ui.R" and "app.R".
3) Run the script "server.R" .
4) Enter your ESI + and ESI - files in a .csv (sep ;) file with the following structure : metabolic feature ID; row m/z; row retention time; Blank accumulation; QC(s) accumulation(s); Samples accumulations, in the window that appears after running "server.R" script.
DOI: 10.57745/q89rym
title: filtering_functions_gc.R

description: 1) Open the four R script files ("filtering_functions_gc.R", "ui.R", "server.R" and "app.R"). 
2) Run the scripts "filtering_functions_gc.R", "ui.R" and "app.R".
3) Run the script "server.R" .
4) Enter your ESI + and ESI - files in a .csv (sep ;) file with the following structure : metabolic feature ID; row m/z; row retention time; Blank accumulation; QC(s) accumulation(s); Samples accumulations, in the window that appears after running "server.R" script.
DOI: 10.57745/zbsq9f
title: Supplementary table 1 - Annotation and information of Arabidopsis thaliana seed specialized metabolome

description: Identification (ID), Ionization mode (ESI), m/z (mass/charge), Retention Time (RT), Molecular Network clusters, Metabolic category (based on molecular network clusters and annotation based on standards and according to public databases), , source of the annotation and level of annotation are indicated for each metabolite, QC variation (variation of the considered metabolite accross quality control sample)
DOI: 10.57745/4wrlnv
title: Relative accumulation of Arabidopsis thaliana specialized metabolites during seed development under heat stress and control conditions (LC-MS-MS).tab

description: Data are showed for the six seed developmental stages (Globular, Transition, Torpedo, Bent cotyledon, Mature green and Dry seed), the two conditions of development (Heat stress [Str] and Control [Ctr]) and biological replicates (1, 2, 3) considered in this study. The Quality Control (QC) samples consisted in a mix of all the samples considered in the analyses which was injected several times accross the LC-MS/MS run analysis to evaluate the quality of the data.
DOI: 10.57745/cc4yjo
title: Normalized read counts of gene expression

description: Five seed developmental stages (Globular, Transition, Torpedo, Bent cotyledon and Mature green) developped in two different temperature conditions (Heat stress : 27°C/24°C and Control : 21°C/19°C) were used. Three biological replicates per sample were used.
DOI: 10.57745/qvyvfe
title: Statistical analysis on transcriptomic data

description: S5a. Statistical analysis on transcriptomic data. 
In order to evaluate the individual effects of the seed developmental stage (Globular, Transition, Torpedo, Bent cotyledon and Mature green), and development condition (Heat stress : 27°C/24°C and Control : 21°C/19°C) on gene expression, a multifactorial analysis was conducted using the multifactor designs method of the DEseq2 R package (Love et al., 2014)( https://bioconductor.org/packages/release/bioc/html/DESeq2.html). This method evaluates the weight of each factor considered in the analysis and its impact on differentially expressed genes (DEGs), according to a false discovery rate (FDR)-adjusted p-value &lt;0.05. 

S5b. Top 50 genes most significatively affected by heat stress during Arabidopsis thaliana seed development. 
Identification (ID), Acronym, Arabidopsis Genome Initiative code (AGI code), DESeq2 differential expression analysis test adjusted p-value (adj p.value) and the log2(heat stress/control) (Log2[FC]) are indicated for each seed developmental stage analysed (Globular, Transition, Torpedo, Bent cotyledon and Mature green) for the top-50 most significative genes of the two-way differential expression analysis test performed.
DOI: 10.57745/x66pkg
title: Metabolomic and transcriptomic data integration

description: Correlation between DEG expressions and SM accumulations are listed. The type of interaction (only positive correlations were considered), the name of the interaction and the strength of interaction (only correlations ≥ 0.7 were kept) are showed.
DOI: 10.57745/eofu3m
title: Statistical analysis on metabolomic data

description: S3a : Statistical analysis on metabolomic data
In order to evaluate the individual effects of the seed developmental stage (Globular, Transition, Torpedo, Bent cotyledon, Mature green and Dry seed), and development condition (Heat stress : 27°C/24°C and Control : 21°C/19°C) on metabolite accumulation, an two-way ANOVA (analysis of variance) has been conducted (p. value adjusted ≤ 0,05) on untargeted metabolomic data (LC-MS/MS).

S3b : Top 50 metabolites most significatively affected by heat stress during Arabidopsis thaliana seed development. 
Identification (ID), Annotation, Metabolic category (based on molecular network clusters and annotation based on standards and according to public databases), ANOVA test adjusted p-value (Condition adj p.value) and the log2(heat stress/control) (Log2[FC]) are indicated for each seed developmental stage analysed (Globular, Transition, Torpedo, Bent cotyledon, Mature green and Dry seeds) for the top-50 most significative metabolites of the two-way ANOVA test performed.
DOI: 10.57745/grox2e
title: Seed tissue gene expression

description: S6a : Arabidopsis thaliana Wassilewskija (Ws-0) seed tissue transcriptomes during seed development
Gene expression levels in the seed embryo, seed endosperm and seed coat during Arabidopsis thaliana Ws-0 seed development. Corresponding dataset was published by Belmonte et al. (2013; doi.org/10.1073/pnas.1222061110)
The gene expression averages of the biological replicates of corresponding data are presented for the three tissues at several seed developmental stages (pre-globular, globular, heart, linear cotyledon, mature green and post mature green). Gene expression averages of all seed tissues analysed by Belmonte et al. are also showed. Gene levels are expressed in RMA averaged signal. Genes that were significatively affected by heat stress during Arabidopsis thaliana Columbia-0 seed development are indicated. DAP, days after pollination; pg, pre-globular; g, globular; h,heart; lc, linear cotyledon; mg, mature green)

S6b : Arabidopsis thaliana Columbia 0 (Col-0) embryo transcriptome during seed development
Gene expression in the embryo during Arabidopsis thaliana Col-0 seed development. Corresponding datasets were published by Hofmann et al. (2019; doi.org/10.1007/s00497-018-00357-2) and Schneider et al. (2016; doi: 10.1111/tpj.13106). 
The gene expression averages of the biological replicate of corresponding data are presented for several embryo developmental stages. Gene levels are expressed in TPM (transcript per million). Genes that were significatively affected by heat stress during Arabidopsis thaliana Col-0 seed development are indicated. 
DAP, days after pollination
DOI: 10.57745/cnqtgr
title: DEseq2_Multifactorial.R

description: Script to perform DESeq2 multifactorial analysis on transcriptomic data.
DOI: 10.57745/ptcpue
title: Annotation and information of Arabidopsis thaliana seed specialized metabolome

description: Identification (ID), Ionization mode (ESI), m/z (mass/charge), Retention Time (RT), Molecular Network clusters, Metabolic category (based on molecular network clusters and annotation based on standards and public databases), source of the annotation, the level of annotation (According to Alseekh et al. 2021 [DOI:10.1038/s41592-021-01197-1] (A) Compounds identified with chemical standards, B. Putatively annotated compounds : (Bi) based on m/z + RT and/or spectral matching with public m/z + RT and/or spectral libraries and (Bi). based on manual annotation with Sirius software (Dührkop et al. 2019 [DOI:10.1038/s41592-019-0344-8]), (D) Putatively annotated compounds based on m/z matching with m/z library. (M) Putatively characterized compound metabolic category based on molecular network [i.e. based on spectral similarity to known compounds of a chemical class]) and QC variation (variation of the considered metabolite accross quality control sample) are indicated for each metabolite.
n/N= metabolite or cluster from negative ionization mode, p/P= metabolite or cluster from positive ionization mode.
DOI: 10.57745/yjzdfm
title: Annotation and information of Arabidopsis thaliana seed specialized metabolome_Revised version July 2025

description: Identification (ID), Ionization mode (ESI), m/z (mass/charge), Retention Time (RT), Molecular Network clusters, Metabolic category (based on molecular network clusters and annotation based on standards and public databases), source of the annotation, the level of annotation (According to Alseekh et al. 2021 [DOI:10.1038/s41592-021-01197-1] (A) Compounds identified with chemical standards, B. Putatively annotated compounds : (Bi) based on m/z + RT and/or spectral matching with public m/z + RT and/or spectral libraries and (Bi). based on manual annotation with Sirius software (Dührkop et al. 2019 [DOI:10.1038/s41592-019-0344-8]), (D) Putatively annotated compounds based on m/z matching with m/z library. (M) Putatively characterized compound metabolic category based on molecular network [i.e. based on spectral similarity to known compounds of a chemical class]) and QC variation (variation of the considered metabolite accross quality control sample) are indicated for each metabolite.
n/N= metabolite or cluster from negative ionization mode, p/P= metabolite or cluster from positive ionization mode.