cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9820766.v1
title: Additional file 1: of Antimicrobial use policy change in pre-weaned dairy calves and its impact on antimicrobial resistance in commensal Escherichia coli: a cross sectional and ecological study

description: Table S1. Antimicrobial combination treatments given to pre-weaned calves (nâ =â 4301) on a dairy farm. Table S2. Criteria for latent class analysis model selection based on resistance to 11 antimicrobials. Table S3. Minimum inhibitory concentration (Îźg/ml) of antimicrobials used for agar dilution assay. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.9820760
title: Additional file 3: of Missense mutations in a transmembrane domain of the Komagataeibacter xylinus BcsA lead to changes in cellulose synthesis

description: Primers used for bcs operon gene amplification and for sequencing of bcs genes. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.9820760.v1
title: Additional file 3: of Missense mutations in a transmembrane domain of the Komagataeibacter xylinus BcsA lead to changes in cellulose synthesis

description: Primers used for bcs operon gene amplification and for sequencing of bcs genes. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.9820646
title: HRD score and HRD score components matrix for downsampled (10X) WGS data

description: This file contains the HRD scores and HRD score components (HRD-LOH, LST and NtAI) for the downsampled (10X) WGS-derived data.
DOI: 10.6084/m9.figshare.9820625
title: CAMMA and LMA data

description: These are CAMMA and LMA data presented in the paper.
DOI: 10.6084/m9.figshare.9820625.v1
title: CAMMA and LMA data

description: These are CAMMA and LMA data presented in the paper.
DOI: 10.26180/5d7adfe99745c
title: Results

description: This contains the results for the paper "Time series classification for varying length series".
DOI: 10.6084/m9.figshare.9820427
title: Dataset for: Verification of the Coupled-Momentum Method with Womersley’s Deformable Wall Analytical Solution

description: In this paper, we perform a verification study of the Coupled-Momentum Method (CMM), a fluid-structure interaction (FSI) model which uses a thin linear elastic membrane and linear kinematics to describe the mechanical behavior of the vessel wall. The verification of this model is done using Womersley’s deformable wall analytical solution for pulsatile flow in a semi-infinite cylindrical vessel. This solution is, under certain premises, the analytical solution of the CMM and can thus be used for model verification. For the numerical solution, we employ an impedance boundary condition to define a reflection-free outflow boundary condition and thus mimic the physics of the analytical solution, which is defined on a semi-infinite domain. We first provide a rigorous derivation of Womersley’s deformable wall theory via scale analysis. We then illustrate different characteristics of the analytical solution such as space-time wave periodicity and attenuation. Finally, we present the verification tests comparing the CMM with Womersley’s theory.
DOI: 10.6084/m9.figshare.9820262
title: Raw Data of Paper "Designing Virtual Spaces to Support Collaborative Creativity"

description: This is a dataset of the paper "Designing spaces to support collaborative creativity in Shared Virtual Environments"<br>Shared Virtual Environments (SVEs) have been researched extensively within the fields of education, entertainment, work, and training, yet there has been limited research on the creative and collaborative aspects of interactivity in SVEs. The important role that creativity and collaboration play in human society raises the question of the way that virtual working spaces might be designed to support collaborative creativity in SVEs. In this paper, we outline an SVE named LeMo, which allows two people to collaboratively create a short loop of music together. Then we present a study of LeMo, in which 52 users composed music in pairs using four different virtual working space configurations. Key findings indicated by results include: i) Providing personal space is an effective way to support collaborative creativity in SVEs, ii) personal spaces with a fluid light-weight boundary could provide enough support, worked better and was preferable to ones with rigid boundaries and iii) a configuration that provides a movable personal space was preferred to one that provided no mobility. Following these findings, five corresponding design implications for Shared Virtual Environments focusing on supporting collaborative creativity are given and conclusions are made.<br><br><br><br>
DOI: 10.6084/m9.figshare.9820400
title: Global Survey and Empirical Model of Fast Magnetosonic Waves Over Their Full Frequency Range in Earth’s Inner Magnetosphere

description: This is a dataset created to reproduce the figures in the paper submitted to Journal of Geophysical Research Space Physics. The title of the paper is 'Global Survey and Empirical Model of Fast Magnetosonic Waves Over Their Full Frequency Range in Earth’s Inner Magnetosphere'.
DOI: 10.6084/m9.figshare.9820427.v1
title: Dataset for: Verification of the Coupled-Momentum Method with Womersley’s Deformable Wall Analytical Solution

description: In this paper, we perform a verification study of the Coupled-Momentum Method (CMM), a fluid-structure interaction (FSI) model which uses a thin linear elastic membrane and linear kinematics to describe the mechanical behavior of the vessel wall. The verification of this model is done using Womersley’s deformable wall analytical solution for pulsatile flow in a semi-infinite cylindrical vessel. This solution is, under certain premises, the analytical solution of the CMM and can thus be used for model verification. For the numerical solution, we employ an impedance boundary condition to define a reflection-free outflow boundary condition and thus mimic the physics of the analytical solution, which is defined on a semi-infinite domain. We first provide a rigorous derivation of Womersley’s deformable wall theory via scale analysis. We then illustrate different characteristics of the analytical solution such as space-time wave periodicity and attenuation. Finally, we present the verification tests comparing the CMM with Womersley’s theory.
DOI: 10.6084/m9.figshare.9820262.v1
title: Raw Data of Paper "Designing Virtual Spaces to Support Collaborative Creativity"

description: This is a dataset of the paper "Designing spaces to support collaborative creativity in Shared Virtual Environments"<br>Shared Virtual Environments (SVEs) have been researched extensively within the fields of education, entertainment, work, and training, yet there has been limited research on the creative and collaborative aspects of interactivity in SVEs. The important role that creativity and collaboration play in human society raises the question of the way that virtual working spaces might be designed to support collaborative creativity in SVEs. In this paper, we outline an SVE named LeMo, which allows two people to collaboratively create a short loop of music together. Then we present a study of LeMo, in which 52 users composed music in pairs using four different virtual working space configurations. Key findings indicated by results include: i) Providing personal space is an effective way to support collaborative creativity in SVEs, ii) personal spaces with a fluid light-weight boundary could provide enough support, worked better and was preferable to ones with rigid boundaries and iii) a configuration that provides a movable personal space was preferred to one that provided no mobility. Following these findings, five corresponding design implications for Shared Virtual Environments focusing on supporting collaborative creativity are given and conclusions are made.<br><br><br><br>
DOI: 10.6084/m9.figshare.9820184
title: Data for Figure7

description: Data of delay time vs. thickness for Tibetan amphibolites, experimental granulites and natural eclogites.
DOI: 10.6084/m9.figshare.9820181
title: Mixotrophic cultivation of Spirulina platensis in dairy wastewater

description: Experimental date of work: Mixotrophic cultivation of Spirulina platensis in dairy wastewater: effect on the production of biomass, biochemical composition and antioxidant capacity
DOI: 10.6084/m9.figshare.9820184.v2
title: Data for Figure7

description: Data of delay time vs. thickness for Tibetan amphibolites, experimental granulites and natural eclogites.
DOI: 10.6084/m9.figshare.9820139
title: flights.csv

description: Sourced from Kaggle (https://www.kaggle.com/usdot/flight-delays)
DOI: 10.6084/m9.figshare.9820181.v1
title: Mixotrophic cultivation of Spirulina platensis in dairy wastewater

description: Experimental date of work: Mixotrophic cultivation of Spirulina platensis in dairy wastewater: effect on the production of biomass, biochemical composition and antioxidant capacity
DOI: 10.6084/m9.figshare.9820184.v1
title: Data for Figure 7.xlsx

description: Data of delay time vs. thickness for Tibetan amphibolites, experimental granulites and natural eclogites.
DOI: 10.6084/m9.figshare.9817070
title: Echocardiographic prediction of surgical reparability in degenerative mitral regurgitation due to leaflet prolapse: a review

description: <b>Introduction</b>: Despite current guidelines provide recommendations for the optimal management of degenerative mitral regurgitation (MR), this condition remains often undertreated with delay in surgical referral and dismal effect on outcomes. <b>Areas covered</b>: This review focuses on the role of echocardiography in guiding mitral valve (MV) surgical repair in degenerative MR due to leaflet prolapse. <b>Expert opinion</b>: A stepwise protocol-driven echocardiography shared by referring physician and surgeon may help to guide referral to surgical repair in degenerative MR. This protocol particularly is useful to identify the ideal patho-anatomy for a successful and durable repair especially when early surgery is proposed and to refer the patient to centers of excellence in case of complex anatomy. Nearly 100% repair rate can be achieved when the surgical technique is adapted to the lesions seen in each valve. Three-dimensional echocardiography predicts repair complexity may be useful and should therefore be implemented. However, the current literature is far from comprehensive deriving from small, single-center studies. Therefore, reproducibility and external validation, especially with newly developed quantitative automated software, are still needed.
DOI: 10.6084/m9.figshare.9817115
title: UCHH-01-11VW Client Data Table and Stats.xlsx

description: This is the raw dataset for a metabolomic analysis on conditionally immortalized glomerular endothelial cells
DOI: 10.6084/m9.figshare.9817139
title: Carpobrotus Data AJB 2019.xlsx

description: Data of growth (relative growth rate, RGR (day<sup>-1</sup>), total dry weight (g), and root to shoot ratio (RSR)), plant water content (PWC), composition of plant tissues (%C, %N, C/N, δ<sup>13</sup>C, Δ<sup>13</sup>C, and δ<sup>15</sup>N), and seasonal measurements throughout the experiment for the chlorophyll fluorescence and spectral reflectance parameters of <i>C. aff. acinaciformis</i> and <i>C. edulis</i> grown at two different nutrient conditions with no competition and in competition.<br>
DOI: 10.6084/m9.figshare.9816965
title: Searchable Hub

description: This is a searchable track hub example
DOI: 10.6084/m9.figshare.9817070.v1
title: Echocardiographic prediction of surgical reparability in degenerative mitral regurgitation due to leaflet prolapse: a review

description: <b>Introduction</b>: Despite current guidelines provide recommendations for the optimal management of degenerative mitral regurgitation (MR), this condition remains often undertreated with delay in surgical referral and dismal effect on outcomes. <b>Areas covered</b>: This review focuses on the role of echocardiography in guiding mitral valve (MV) surgical repair in degenerative MR due to leaflet prolapse. <b>Expert opinion</b>: A stepwise protocol-driven echocardiography shared by referring physician and surgeon may help to guide referral to surgical repair in degenerative MR. This protocol particularly is useful to identify the ideal patho-anatomy for a successful and durable repair especially when early surgery is proposed and to refer the patient to centers of excellence in case of complex anatomy. Nearly 100% repair rate can be achieved when the surgical technique is adapted to the lesions seen in each valve. Three-dimensional echocardiography predicts repair complexity may be useful and should therefore be implemented. However, the current literature is far from comprehensive deriving from small, single-center studies. Therefore, reproducibility and external validation, especially with newly developed quantitative automated software, are still needed.
DOI: 10.6084/m9.figshare.9817115.v1
title: UCHH-01-11VW Client Data Table and Stats.xlsx

description: This is the raw dataset for a metabolomic analysis on conditionally immortalized glomerular endothelial cells
DOI: 10.6084/m9.figshare.9816929
title: Dataset for McNamara et al "The effects of natural substrate discontinuities on the quadrupedal gait kinematics of free-ranging <i>Saimiri sciureus</i>"

description: Data were used in analyses of spatiotemporal kinematic adjustments to arboreal substrate discontinuities in squirrels monkeys, specifically consisting of raw gait variables coded using the Anterior-Posterior Sequence system of Abourachid (2003), as well as metadata concerning the type of substrate(s) the squirrel monkey was moving on during the bout of locomotion.<br>Abourachid A. 2003. A new way of analysing symmetrical and asymmetrical gaits in quadrupeds. Comptes Rendus Biologies 326(7):625-630.<br>
DOI: 10.6084/m9.figshare.9816965.v1
title: Searchable Hub

description: This is a searchable track hub example
DOI: 10.6084/m9.figshare.9816929.v1
title: Dataset for McNamara et al "The effects of natural substrate discontinuities on the quadrupedal gait kinematics of free-ranging <i>Saimiri sciureus</i>"

description: Data were used in analyses of spatiotemporal kinematic adjustments to arboreal substrate discontinuities in squirrels monkeys, specifically consisting of raw gait variables coded using the Anterior-Posterior Sequence system of Abourachid (2003), as well as metadata concerning the type of substrate(s) the squirrel monkey was moving on during the bout of locomotion.<br>Abourachid A. 2003. A new way of analysing symmetrical and asymmetrical gaits in quadrupeds. Comptes Rendus Biologies 326(7):625-630.<br>
DOI: 10.6084/m9.figshare.9816860
title: F1000 1990 Ghazaryan et. al..xlsx

description: Data from miRNA expression study
DOI: 10.6084/m9.figshare.9816806
title: EU Twinning projects in Serbia data set

description: This data set captures all EU-funded Twinning projects in Serbia during the CARDS and IPA periods, from 2004 to 2019. All in all, 79 projects were identified. Several details are attached to each project, such as sector, budget, duration, participation of EU member states and source(s) of information. A related journal paper with in-depth analysis of this data is in the making.<br>
DOI: 10.6084/m9.figshare.9816704
title: Cars_LiteRate

description: Data set formatted for analysis in LiteRate as outlined in the supplemental information.
DOI: 10.6084/m9.figshare.9816677
title: C14_PyRate

description: This contains the file formatted for analysis in PyRate. The function used to create this file is extract.ages() with details found in the supplemental information.
DOI: 10.6084/m9.figshare.9816677.v1
title: C14_PyRate

description: This contains the file formatted for analysis in PyRate. The function used to create this file is extract.ages() with details found in the supplemental information.
DOI: 10.6084/m9.figshare.9816806.v1
title: EU Twinning projects in Serbia data set

description: This data set contains all EU-funded Twinning projects in Serbia during the CARDS and IPA periods, from 2004 to 2019. All in all, 79 elements were found. Where identified, a set of details may be found to any of the presented projects:- sector,- budget,- duration,- participation of EU member states. <br>- source(s)
DOI: 10.6084/m9.figshare.9816806.v3
title: EU Twinning projects in Serbia data set

description: This data set captures all EU-funded Twinning projects in Serbia during the CARDS and IPA periods, from 2004 to 2019. All in all, 79 projects were identified. Several details are attached to each project, such as sector, budget, duration, participation of EU member states and source(s) of information. A related journal paper with in-depth analysis of this data is in the making.<br>
DOI: 10.6084/m9.figshare.9816806.v2
title: EU Twinning projects in Serbia data set

description: This data set captures all EU-funded Twinning projects in Serbia during the CARDS and IPA periods, from 2004 to 2019. All in all, 79 projects were identified. Several details are attached to each project, such as sector, budget, duration, participation of EU member states and source(s) of information. A related journal paper with in-depth analysis of this data is in the making.<br>
DOI: 10.6084/m9.figshare.9816488
title: Forwarding during final felling: work element-specific distributions of driving distances at the stand level

description: Automatic data collection is becoming increasingly common in cut-to-length forest operations. However, only few studies have analyzed automatically collected follow-up data from forwarders. In this study, we analyzed the driving distances of the four work elements <i>Driving empty, Loading drive, Driving loaded</i>, and <i>Unloading drive</i> (the sum of which being <i>Total driven distance</i>) of two forwarders operating in central Sweden. The analysis included finding the most appropriate probability density functions for each distance at the stand level (46 final felling stands in total, with one load as the unit of observation). The results showed that the mean intra-stand <i>Total driven distance</i> ranged 364–2393 m, and that most distances in the majority of the stands were positively skewed. Versatile probability distributions like <i>Generalized Extreme Value</i> and <i>Log-logistic</i> were the most common probability distributions. Our results provide researchers and managers a numeric understanding of the intra- and inter-stand variation of forwarding work. Hence, our study can help spread awareness of this variation to managers and foresters. With this awareness, managers, foresters, and researchers can better understand the pros and cons of follow-up data from forwarders, and how to best use and collect it. Our results can also be used by researchers as high-resolution indata during simulations of forwarding work. Additionally, the results can be used as a reference or control when determining the most suitable data distributions in future studies.
DOI: 10.6084/m9.figshare.9816488.v1
title: Forwarding during final felling: work element-specific distributions of driving distances at the stand level

description: Automatic data collection is becoming increasingly common in cut-to-length forest operations. However, only few studies have analyzed automatically collected follow-up data from forwarders. In this study, we analyzed the driving distances of the four work elements <i>Driving empty, Loading drive, Driving loaded</i>, and <i>Unloading drive</i> (the sum of which being <i>Total driven distance</i>) of two forwarders operating in central Sweden. The analysis included finding the most appropriate probability density functions for each distance at the stand level (46 final felling stands in total, with one load as the unit of observation). The results showed that the mean intra-stand <i>Total driven distance</i> ranged 364–2393 m, and that most distances in the majority of the stands were positively skewed. Versatile probability distributions like <i>Generalized Extreme Value</i> and <i>Log-logistic</i> were the most common probability distributions. Our results provide researchers and managers a numeric understanding of the intra- and inter-stand variation of forwarding work. Hence, our study can help spread awareness of this variation to managers and foresters. With this awareness, managers, foresters, and researchers can better understand the pros and cons of follow-up data from forwarders, and how to best use and collect it. Our results can also be used by researchers as high-resolution indata during simulations of forwarding work. Additionally, the results can be used as a reference or control when determining the most suitable data distributions in future studies.
DOI: 10.6084/m9.figshare.12867314
title: SARS-CoV-2 main protease 3D print model

description: A 3D model for printing SARS-CoV-2 main protease
DOI: 10.6084/m9.figshare.12867314.v1
title: SARS-CoV-2 main protease 3D print model

description: A 3D model for printing SARS-CoV-2 main protease
DOI: 10.6084/m9.figshare.9816443
title: Common Archaeological Phases - EuroEvol

description: Data set aggregated by the EuroEvol project containing the common cultures and periods for the European Neolithic.
DOI: 10.6084/m9.figshare.9816452.v1
title: Bayesian Nonparametric Policy Search with Application to Periodontal Recall Intervals

description: Tooth loss from periodontal disease is a major public health burden in the United States. Standard clinical practice is to recommend a dental visit every six months; however, this practice is not evidence-based, and poor dental outcomes and increasing dental insurance premiums indicate room for improvement. We consider a tailored approach that recommends recall time based on patient characteristics and medical history to minimize disease progression without increasing resource expenditures. We formalize this method as a dynamic treatment regime which comprises a sequence of decisions, one per stage of intervention, that follow a decision rule which maps current patient information to a recommendation for their next visit time. The dynamics of periodontal health, visit frequency, and patient compliance are complex, yet the estimated optimal regime must be interpretable to domain experts if it is to be integrated into clinical practice. We combine non-parametric Bayesian dynamics modeling with policy-search algorithms to estimate the optimal dynamic treatment regime within an interpretable class of regimes. Both simulation experiments and application to a rich database of electronic dental records from the HealthPartners HMO shows that our proposed method leads to better dental health without increasing the average recommended recall time relative to competing methods.
DOI: 10.6084/m9.figshare.9816404
title: C14 Samples - EuroEvol

description: Data set of C14 samples aggregated by the EuroEvol project.