cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30627842
title: <b><i>Bacillus subtilis</i></b><b> modifies scatter-hoarding behavior by regulating gut </b><b><i>Akkermansia muciniphila</i></b><b>-mediated spatial memory in squirrels</b>

description: The gut-brain axis mediates communication between the gut microbiota and cognitive function, but its role in complex, ecologically relevant behaviors remains poorly understood. Here, we demonstrate that the probiotic <i>Bacillus subtilis</i> enhances scatter-hoarding—a spatial memory-dependent foraging behavior—in rodents by acting as an ecological engineer of the gut microbiome. Supplementation with <i>B. subtilis</i> in Pallas’ squirrels (<i>Callosciurus erythraeus</i>) significantly increased scatter-hoarding intensity, an effect associated with a marked enrichment of the gut commensal <i>Akkermansia muciniphila</i>. This microbial shift elevated cecal levels of short-chain fatty acids, including hexanoate, and increased serum tryptophan. In the mouse model, direct <i>A. muciniphila</i> oral gavage improved spatial memory and activated hippocampal pathways for synaptic plasticity, such as long-term potentiation and glutamatergic signaling. Our findings reveal a novel gut-brain pathway wherein <i>B. subtilis</i> promotes cognitive performance via <i>A. muciniphila</i>, suggesting that microbiome-mediated enhancement of spatial memory may underlie adaptive foraging strategies in wild rodents, with potential implications for cognitive health and probiotic therapeutics.
DOI: 10.6084/m9.figshare.30627842.v1
title: <b><i>Bacillus subtilis</i></b><b> modifies scatter-hoarding behavior by regulating gut </b><b><i>Akkermansia muciniphila</i></b><b>-mediated spatial memory in squirrels</b>

description: The gut-brain axis mediates communication between the gut microbiota and cognitive function, but its role in complex, ecologically relevant behaviors remains poorly understood. Here, we demonstrate that the probiotic <i>Bacillus subtilis</i> enhances scatter-hoarding—a spatial memory-dependent foraging behavior—in rodents by acting as an ecological engineer of the gut microbiome. Supplementation with <i>B. subtilis</i> in Pallas’ squirrels (<i>Callosciurus erythraeus</i>) significantly increased scatter-hoarding intensity, an effect associated with a marked enrichment of the gut commensal <i>Akkermansia muciniphila</i>. This microbial shift elevated cecal levels of short-chain fatty acids, including hexanoate, and increased serum tryptophan. In the mouse model, direct <i>A. muciniphila</i> oral gavage improved spatial memory and activated hippocampal pathways for synaptic plasticity, such as long-term potentiation and glutamatergic signaling. Our findings reveal a novel gut-brain pathway wherein <i>B. subtilis</i> promotes cognitive performance via <i>A. muciniphila</i>, suggesting that microbiome-mediated enhancement of spatial memory may underlie adaptive foraging strategies in wild rodents, with potential implications for cognitive health and probiotic therapeutics.
DOI: 10.6084/m9.figshare.25632507
title: Calculation of in-stream water transit time in the Yangtze River basin

description: We calculated all data related to in-stream water transit time (local and basin-scale) as demonstrated in the Spreadsheets. The calculation or method can be found in the MATLAB & Python codes.The ArcGIS shape files are river networks in the Yangtze River basin.
DOI: 10.6084/m9.figshare.25632507.v2
title: Calculation of in-stream water transit time in the Yangtze River basin

description: We calculated all data related to in-stream water transit time (local and basin-scale) as demonstrated in the Spreadsheets. The calculation or method can be found in the MATLAB & Python codes.The ArcGIS shape files are river networks in the Yangtze River basin.
DOI: 10.6084/m9.figshare.25632507.v1
title: Calculation of in-stream water transit time in the Yangtze River basin

description: We calculated all data related to in-stream water transit time (local and basin-scale) as demonstrated in the Spreadsheets. The calculation or method can be found in the MATLAB & Python codes.The ArcGIS shape files are river networks in the Yangtze River basin.
DOI: 10.15468/dl.qedqb2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Paravandellia oxyptera",
 "HasCoordinate is true",
 "Geometry POLYGON((-78 12, -73 12, -73 0, -78 0, -78 12))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035758-251025141854904/datasets/export for details.
DOI: 10.15468/dl.qnsp4v
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-110.6688 25.94913, -110.5188 25.94913, -110.5188 26.09913, -110.6688 26.09913, -110.6688 25.94913))"
 ]
}

 The dataset includes 14 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035759-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17618074
title: Text2SPARQL-agnostic Test Datasets

description: This is a password protected ZIP archive of the Streckenvideo test datasets used for the evaluation of the master thesis "LLM-Driven Question Answering on Knowledge Graphs for Enhanced Portability and Answer Quality Optimization" 

Password: text2sparql2025
DOI: 10.5281/zenodo.17618075
title: Text2SPARQL-agnostic Test Datasets

description: This is a password protected ZIP archive of the Streckenvideo test datasets used for the evaluation of the master thesis "LLM-Driven Question Answering on Knowledge Graphs for Enhanced Portability and Answer Quality Optimization" 

Password: text2sparql2025
DOI: 10.15468/dl.56a6n7
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Paravandellia phaneronema",
 "HasCoordinate is true",
 "Geometry POLYGON((-78 12, -73 12, -73 0, -78 0, -78 12))"
 ]
}

 The dataset includes 33 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035761-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.64rmyx
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum clivorum"
 ]
}

 The dataset includes 55 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035763-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bffs2b
title: Occurrence Download

description: A dataset containing 410 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Agrypon flexorium",
 "Year 1984-2025"
 ]
}

 The dataset includes 410 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035764-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.66axcd
title: Occurrence Download

description: A dataset containing 2847 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Zero coordinate, Coordinate out of range, Coordinate invalid, Coordinate rounded, Geodetic datum assumed WGS84, Coordinate reprojected, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate accuracy invalid, Coordinate precision invalid, Coordinate uncertainty meters invalid, Coordinate precision/uncertainty mismatch, Footprint SRS invalid, Footprint WKT mismatch, Footprint WKT invalid, Country coordinate mismatch, Country mismatch, Country derived from coordinates, Continent coordinate mismatch, Continent country mismatch, Continent derived from country, Continent derived from coordinates, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Taxon match aggregate, The scientific name ID was not used in backbone matching, The taxon concept ID was not used in backbone matching, The taxon ID was not used in backbone matching, The taxon concept ID was not found in the checklist, The taxon ID was not found in the checklist, The scientific name differs on the record from that found in the checklist, Taxon match none, The backbone match found using the taxon IDs differs from what would be found if using the scientific names, Depth not metric, Depth unlikely, Depth min max swapped, Depth non numeric, Elevation unlikely, Elevation min max swapped, Elevation not metric, Elevation non numeric, Modified date invalid, Modified date unlikely, Identified date unlikely, Type status invalid, Multimedia date invalid, Multimedia URI invalid, References URI invalid, Error during interpretation, Individual count invalid, Individual count conflicts with occurrence status, Occurrence status unparsable, Occurrence status inferred from basis of record, Georeferenced date unlikely, Georeferenced date invalid, Possibly on loan)",
 "OccurrenceStatus is Present",
 "TaxonKey is Littorinimorpha"
 ]
}

 The dataset includes 2847 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035765-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4mpsjb
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-110.5188 25.94913, -110.3688 25.94913, -110.3688 26.09913, -110.5188 26.09913, -110.5188 25.94913))"
 ]
}

 The dataset includes 56 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035766-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b46vfm
title: Occurrence Download

description: A dataset containing 247 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum dolichocremastrum"
 ]
}

 The dataset includes 247 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035767-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ut7w9q
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum hastiforme"
 ]
}

 The dataset includes 57 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035769-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uyw5dh
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Parotocinclus maculicauda",
 "HasCoordinate is true",
 "Geometry POLYGON((-78 12, -73 12, -73 0, -78 0, -78 12))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035771-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.49s7b9
title: Occurrence Download

description: A dataset containing 290 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pyrrhura pfrimeri"
 ]
}

 The dataset includes 290 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035770-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.242dzv
title: Occurrence Download

description: A dataset containing 4757 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "OccurrenceStatus is Present",
 "TaxonKey is Gunnera tinctoria"
 ]
}

 The dataset includes 4757 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035772-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f67cxa
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-110.3688 25.94913, -110.2188 25.94913, -110.2188 26.09913, -110.3688 26.09913, -110.3688 25.94913))"
 ]
}

 The dataset includes 21 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035773-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cnu7bf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pelecus cultratus",
 "HasCoordinate is true",
 "Geometry POLYGON((-78 12, -73 12, -73 0, -78 0, -78 12))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035774-251025141854904/datasets/export for details.
DOI: 10.5281/zenodo.17582099
title: Root data for cross-biome root presence analyses and associated R scripts

description: Data used for analyses described in manuscript and associated scripts for analyses.
DOI: 10.15468/dl.8n9g2k
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-110.2188 25.94913, -110.0688 25.94913, -110.0688 26.09913, -110.2188 26.09913, -110.2188 25.94913))"
 ]
}

 The dataset includes 36 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035775-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cuhd3a
title: Occurrence Download

description: A dataset listing the 30094 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Pakistan",
 "Geometry POLYGON((59.97314 24.79026,61.14852 21.12419,66.88551 21.2921,68.67657 22.29957,69.76799 23.33503,71.19524 24.09063,71.72697 25.43393,70.69151 27.3929,72.62249 28.56828,74.3296 30.0515,76.73633 30.8071,78.35948 31.39479,77.43597 32.45823,75.92476 32.65413,74.8893 33.68959,75.81282 34.30526,77.77179 34.809,78.77926 35.25676,78.47142 36.9079,75.47699 37.52357,72.73444 37.41163,70.94338 36.46013,69.54411 34.809,69.3762 33.29779,68.56463 31.9545,67.13738 31.53472,66.15789 31.003,65.73811 29.82762,63.12891 29.78235,61.50576 29.89429,60.6662 29.95026,62.12144 28.46704,62.59719 27.29166,62.14942 26.53606,61.14195 25.44463,59.97314 24.79026))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 30094 records were derived from 567 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035756-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6xu77r
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pelmatolapia mariae",
 "HasCoordinate is true",
 "Geometry POLYGON((-78 12, -73 12, -73 0, -78 0, -78 12))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035776-251025141854904/datasets/export for details.
DOI: 10.15468/dl.juc6xd
title: Occurrence Download

description: A dataset containing 136 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum immite"
 ]
}

 The dataset includes 136 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035777-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ux3nvw
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum jalcae"
 ]
}

 The dataset includes 59 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035778-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4wb9yr
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-110.0688 25.94913, -109.9188 25.94913, -109.9188 26.09913, -110.0688 26.09913, -110.0688 25.94913))"
 ]
}

 The dataset includes 113 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035779-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.36f86g
title: Occurrence Download

description: A dataset listing the 476 species recorded in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((29.16038 -25.79261,29.30257 -25.79261,29.30257 -25.7031,29.16038 -25.7031,29.16038 -25.79261))"
 ]
}

 The dataset's 476 records were derived from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035760-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u6fxfu
title: Occurrence Download

description: A dataset containing 329 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum mochiquense"
 ]
}

 The dataset includes 329 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035780-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17618166
title: The Influence of Digital Social Media Campaign Strategy on McDonald's Purchase Intention
DOI: 10.5281/zenodo.17618167
title: The Influence of Digital Social Media Campaign Strategy on McDonald's Purchase Intention
DOI: 10.15468/dl.2sv6ds
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Trichoglossus iris"
 ]
}

 The dataset includes 18 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035781-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ybpaap
title: Occurrence Download

description: A dataset containing 2151 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Zero coordinate, Coordinate out of range, Coordinate invalid, Coordinate rounded, Geodetic datum assumed WGS84, Coordinate reprojected, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate accuracy invalid, Coordinate precision invalid, Coordinate uncertainty meters invalid, Coordinate precision/uncertainty mismatch, Footprint SRS invalid, Footprint WKT mismatch, Footprint WKT invalid, Country coordinate mismatch, Country mismatch, Country derived from coordinates, Continent coordinate mismatch, Continent country mismatch, Continent derived from country, Continent derived from coordinates, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Taxon match aggregate, The scientific name ID was not used in backbone matching, The taxon concept ID was not used in backbone matching, The taxon ID was not used in backbone matching, The taxon concept ID was not found in the checklist, The taxon ID was not found in the checklist, The scientific name differs on the record from that found in the checklist, Taxon match none, The backbone match found using the taxon IDs differs from what would be found if using the scientific names, Depth not metric, Depth unlikely, Depth min max swapped, Depth non numeric, Elevation unlikely, Elevation min max swapped, Elevation not metric, Elevation non numeric, Modified date invalid, Modified date unlikely, Identified date unlikely, Type status invalid, Multimedia date invalid, Multimedia URI invalid, References URI invalid, Error during interpretation, Individual count invalid, Individual count conflicts with occurrence status, Occurrence status unparsable, Occurrence status inferred from basis of record, Georeferenced date unlikely, Georeferenced date invalid, Possibly on loan)",
 "OccurrenceStatus is Present",
 "TaxonKey is Architaenioglossa"
 ]
}

 The dataset includes 2151 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035782-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fec8ag
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pelvicachromis pulcher",
 "HasCoordinate is true",
 "Geometry POLYGON((-78 12, -73 12, -73 0, -78 0, -78 12))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035783-251025141854904/datasets/export for details.
DOI: 10.5281/zenodo.15560592
title: Automated Construction of Task-Aligned Dataset

description: Title: Automated Construction of Task-Aligned Datasets for Instruction Tuning Code LLMs

We create a substantial new dataset of C/C++ code paired with natural-language descriptions. This dataset addresses the relative lack of instruction-tuning data for these languages and can be used to improve any base code model's understanding of C/C++ tasks.
DOI: 10.5281/zenodo.15560591
title: Automated Construction of Task-Aligned Dataset

description: Title: Automated Construction of Task-Aligned Datasets for Instruction Tuning Code LLMs

We create a substantial new dataset of C/C++ code paired with natural-language descriptions. This dataset addresses the relative lack of instruction-tuning data for these languages and can be used to improve any base code model's understanding of C/C++ tasks.
DOI: 10.15468/dl.vm8ufk
title: Occurrence Download

description: A dataset containing 130 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-109.9188 25.94913, -109.7688 25.94913, -109.7688 26.09913, -109.9188 26.09913, -109.9188 25.94913))"
 ]
}

 The dataset includes 130 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035784-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.