cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.guz89h
title: Occurrence Download

description: A dataset containing 580 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Peganum harmala L.",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 580 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013066-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.10274078.v1
title: Excel spreadsheet alternative to the nomogram to help explain probabilistic seismic hazard

description: An alternative in the form of an Excel spreadsheet to the nomogram to help explain probabilistic seismic hazard, which is also available on figshare. See the description of that nomogram for details and the associated journal article: https://link.springer.com/article/10.1007/s10950-019-09885-4.
DOI: 10.6084/m9.figshare.10741142.v1
title: Supplementary Dataset 1 from A design principle of root length distribution of plants

description: Data of vertical distribution of root length density of various plants, collected from published literature.
DOI: 10.6084/m9.figshare.21175054.v1
title: Supplementary Table 6

description: This table contains eight cluster information of DEGs in five time-series RNA-seq of rodent DRGs following peripheral nerve injury by Mfuzz independent.
DOI: 10.17632/vcskpv8tjk
title: Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients

description: The IMPACC cohort, composed of >1,000 hospitalized COVID-19 participants, contains five illness trajectory groups (TGs) during acute infection (first 28 days), ranging from milder (TG1-3) to more severe disease course (TG4) and death (TG5).  Here, we report deep immunophenotyping, profiling of >15,000 longitudinal blood and nasal samples  from 540 participants of the IMPACC cohort, using 14 distinct assays. These unbiased analyses identify cellular and molecular signatures present within 72 hours of hospital admission that distinguish moderate from severe and fatal COVID-19 disease. Importantly, cellular and molecular states also distinguish participants with more severe disease that recover or stabilize within 28 days from those that progress to fatal outcomes (TG4 vs. TG5). Furthermore, our longitudinal design reveals that these biologic states display distinct temporal patterns associated with clinical outcomes. Characterizing host immune responses in relation to heterogeneity in disease course may inform clinical prognosis and opportunities for intervention.
DOI: 10.6084/m9.figshare.26828779.v1
title: CldNetV2 - 202206

description: Retrieval of all-day cloud property based on satellite remote sensing dataGithub page: https://github.com/metdai/PMD-CldNetV2
DOI: 10.17632/2xpjr3bycr
title: Data and codes for HISTORY-DEPENDENT MONETARY POLICY: A LAB EXPERIMENT AND A HENK MODEL

description: This is the replication package for HISTORY-DEPENDENT MONETARY POLICY: A LAB EXPERIMENT AND A HENK MODEL, by Isabelle Salle, Hung Truong (and Jasmina Arifovic).
DOI: 10.17632/c2p38t4vf9
title: Data for: Determination of nanoparticle size using Rayleigh approximation and Mie theory

description: Measured data
DOI: 10.17632/z3brgzrt28
title: LINF_190016400

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.6084/m9.figshare.26075161.v1
title: Identification and validation of three diagnostic autophagy-related genes associated with advanced plaques and immune cell infiltration in carotid atherosclerosis based on integrated bioinformatics analyses

description: We acquired 222 autophagy-related genes (ATGs) from the human autophagy database (http://www.autophagy.lu/index.html). Two CAS mRNA expression profiles (GSE100927 and GSE28829) were downloaded from the GEO database (http://www.ncbi.nlm.nih.gov/geo/). The GSE100927 dataset was based on the GPL17077 platform (Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381) and consisted of 35 early plaques and 69 advanced plaques. We chose 12 early CAS plaques and 29 advanced CAS plaques from the GSE100927 dataset for our analysis (Steenman et al. 2018). The GSE28829 dataset was based on the GPL570 platform (Affymetrix Human Genome U133 Plus 2.0 Array) and consisted of 13 early CAS plaques and 16 advanced CAS plaques. The probe IDs in the expression matrix were processed into gene symbols using the annotation file in the gene chip.
DOI: 10.6084/m9.figshare.26892355.v3
title: μFormer Encoder

description: This item primarily hosts the checkpoint and some sampled data for training μFormer (or Mu-Former, uFormer, MuFormer, for readability), a potent tool tailored for predicting the effects of protein mutations. It is configured to facilitate the replication of the models presented in the paper titled <i>Accelerating protein engineering with fitness landscape modeling and reinforcement learning</i> which can be accessed at this link. Please adhere to the CC BY-NC (Attribution-NonCommercial) license terms when using these files.
DOI: 10.6084/m9.figshare.28366967.v1
title: SOAD raw data

description: SOAD raw data. Please inquire with the author before using this data.
DOI: 10.6084/m9.figshare.7127330.v1
title: Supplementary Material for: Comparing Therapeutic Efficacy and Safety of Epoetin Beta and Epoetin Alfa in the Treatment of Anemia in End-Stage Renal Disease Hemodialysis Patients

description: <b><i>Background:</i></b> Anemia is one of the most prevalent complications in patients with chronic kidney disease, which is believed to be caused by the insufficient synthesis of erythropoietin by the kidney. This phase III study aimed to compare the efficacy and safety of CinnaPoietin® (epoetin beta, CinnaGen) with Eprex® (epoetin alfa, Janssen Cilag) in the treatment of anemia in ESRD hemodialysis patients. <b><i>Methods:</i></b> In this randomized, active-controlled, double-blind, parallel, and non-inferiority trial, patients were randomized to receive either CinnaPoietin® or Eprex® for a 26-week period. The primary endpoints of this study were to assess the mean hemoglobin (Hb) change during the last 4 weeks of treatment from baseline along with the evaluation of the mean weekly epoetin dosage per kilogram of body weight that was necessary to maintain the Hb level within 10–12 g/dL during the last 4 weeks of treatment. As the secondary objective, safety was assessed along with other efficacy endpoints. <b><i>Results:</i></b> A total of 156 patients were included in this clinical trial. There was no statistically significant difference between treatment groups regarding the mean Hb change (<i>p</i> = 0.21). In addition, the mean weekly epoetin dosage per kg of body weight for maintaining the Hb level within 10–12 g/dL showed no statistically significant difference between treatment arms (<i>p</i> = 0.63). Moreover, both products had comparable safety profiles. However, the incidence of Hb levels above 13 g/dL was significantly lower in the CinnaPoietin® group. <b><i>Conclusion:</i></b> CinnaPoietin® was proved to be non-inferior to Eprex® in the treatment of anemia in ESRD hemodialysis patients. The trial was registered in Clinicaltrials.gov (NCT03408639).
DOI: 10.6084/m9.figshare.19076225.v1
title: pedestrian network

description: The pedestrian network was acquired from the public data platform OSM (OpenStreetMap), which consists of nodes and links.
DOI: 10.6084/m9.figshare.28521212.v1
title: Fast Report: Surface deformation associated with the 2025 Dapu earthquake (Appendix)

description: This is the appendix in 'Fast Report: Surface deformation associated with the 2025 Dapu earthquake', which is under review in Terrestrial, Atmospheric and Oceanic Sciences
DOI: 10.6084/m9.figshare.3512189.v1
title: Appendix E. A table showing habitat suitability index (HSI) equations.

description: A table showing habitat suitability index (HSI) equations.
DOI: 10.6084/m9.figshare.5128351.v1
title: Supplementary Material for: Potential Association of <b><i>INMT</i></b> Nonsynonymous Variant (His46Pro) with Hirschsprung's Disease

description: <b><i>Background:</i></b> Hirschsprung's disease (HSCR) is a congenital disorder which is characterized by the lack of ganglion cells in part of or the entire colon, resulting in intestinal obstruction and other related symptoms. Recently, our group has conducted a genome-wide association study in Korean HSCR cases and controls to identify novel markers in other genes. <b><i>Objectives:</i></b> The present research aimed to further study the potential association of <i>INMT</i> with HSCR by conducting a replication study. <b><i>Methods:</i></b> A total of 15 <i>INMT</i> single nucleotide polymorphisms (SNPs) were analyzed for the association with HSCR in 187 HSCR patients and 283 controls. Analyses were also conducted for subtypes of HSCR (short-segment, long-segment, and total colonic aganglionosis). <b><i>Results:</i></b> A nonsynonymous SNP <i>rs77743549</i> (His46Pro) was significantly associated with the increased risk of HSCR (odds ratio = 1.77; corrected p = 0.002). Furthermore, this <i>rs77743549</i> retained its association with all subtypes of HSCR (p = 0.006-0.002 under the codominant model). A global test showed that <i>rs77743549</i> was associated with the length of aganglionosis (p = 0.00004). <b><i>Conclusion:</i></b> Although further replications and functional evaluations are needed, our study suggests that <i>rs77743549</i> of <i>INMT</i> may be associated with the risk for HSCR and/or the development of the enteric nervous system.
DOI: 10.6084/m9.figshare.20292484.v1
title: The influence of tinnitus and hearing loss on the functional status of military Service members and Veterans

description: This study evaluated the influence of tinnitus and hearing loss on the functional status of military Service members and Veterans. Participants completed audiologic testing and self-report instruments to assess tinnitus, hearing, and general functioning. We conducted multiple linear regression analyses using cross-sectional data with functional status as the dependent variable. The primary independent variables were tinnitus and average low-, high-, and extended high-frequency hearing thresholds. Secondary independent variables were subjective tinnitus severity and hearing difficulties. Each of the independent variables was modelled separately for Service members and Veterans; covariates for each multivariable model were identified <i>a priori</i> and, depending on the association being modelled, included age, gender, blast-wave exposure, and history of military traumatic brain injury. Data were analysed from 283 Service members and 390 Veterans. After controlling for potential confounders, presence of tinnitus, tinnitus severity, average low-frequency hearing thresholds, and subjective hearing difficulties were significantly associated with functional status in Service members and Veterans. These results suggest that tinnitus and poorer low-frequency hearing, and the perceived severity of tinnitus and hearing difficulties, may be associated with poorer functional status among Service members and Veterans.
DOI: 10.6084/m9.figshare.28903847.v1
title: loneliness Scale

description: loneliness Scale
DOI: 10.6084/m9.figshare.29134598.v1
title: 3D-Helical Artificial Chromatophore for Thermally-Tunable Fluorescence and Omnidirectional Stealth Switching.xlsx

description: This paper presents a bio-inspired thermochromic actuator that mimics natural camouflage systems by switching between visible and stealth modes in response to temperature changes. Thus, the innovation of this research involves a yarn-based artificial muscle with a helical structure that enables rapid switching between visible and stealth modes through vertical contraction and expansion. Unlike previous systems that rely on mechanical stimuli, this design uses thermal energy to trigger dynamic color changes. Selective surface coating with Rhodamine B and titanium dioxide (TiO₂) enables differential photo-reactivity to ultraviolet-visible (UV) light and forms the basis for rapid and reversible chromatic transitions. When exposed to an external thermal impulse, the artificial chromatophore—measuring 1400 μm in thickness—can rotate up to 309°, exhibit a negative strain of 84.6%, and reach an average actuation velocity of 297.4 μm/s/°C. This performance is among the fastest reported for color-tunable materials. Notably, the system’s thermally induced color change is effective not only in air but also in completely different environments, including underwater. This advanced approach is expected to broaden the application of adaptive materials in various industrial industries, including space and deep-sea sensors, military stealth and adaptive camouflage, temperature-regulating smart textiles for nighttime use, and smart ocean buoys.
DOI: 10.6084/m9.figshare.5127913.v1
title: Supplementary Material for: Carotid Arterial Hemodynamic in Ischemic Levkoaraiosis Suggests Hypoperfusion Mechanism

description: <b><i>Background:</i></b> Leukoaraiosis (ILA) is believed to be ischaemic in origin due to its similar location as that of lacunar infarctions and its association with cerebrovascular risk factors. However, its pathophysiology is not well understood. The ischaemic injuries may be a result of increased pulsatility or cerebral hypo-perfusion. We used carotid duplex ultrasound to prove that the underlying mechanism is hypo-perfusion. <b><i>Methods:</i></b> We compared 55 ILA patients to 44 risk factor-matched controls with normal magnetic resonance imaging (MRI) of the head. ILA diagnosis was based on MRI and was further categorised according to the Fazekas scale. We measured carotid artery blood flow velocity and diameter and calculated carotid blood flow and resistance indexes. <b><i>Results:</i></b> Blood flow velocities and blood flows were significantly lower in the ILA group, including diastolic, systolic and mean pressures (p ≤ 0.05). The resistance indices were higher in the ILA group, but the differences were not statistically significant. All the velocities and blood flows showed a decreasing trend with higher Fazekas score, whereas resistance indexes showed an increasing trend. <b><i>Conclusions:</i></b> Lower blood flow and higher resistance of carotid arteries are consistent with the hypo-perfusion theory of ILA. Carotid ultrasound could have a diagnostic and prognostic role in ILA patients.
DOI: 10.17632/5k8wjrhgwh
title: Causal set generator and action computer

description: The causal set approach to quantum gravity has gained traction over the past three decades, but numerical experiments involving causal sets have been limited to relatively small scales. The software suite presented here provides a new framework for the generation and study of causal sets. Its efficiency surpasses previous implementations by several orders of magnitude. We highlight several important features of the code, including the compact data structures, the O(N^2) causal set generation process, and several implementations of the O(N^3) algorithm to compute the Benincasa-Dowker action of compact regions of spacetime. We show that by tailoring the data structures and algorithms to take advantage of low-level CPU and GPU architecture designs, we are able to increase the efficiency and reduce the amount of required memory significantly. The presented algorithms and their implementations rely on methods that use CUDA, OpenMP, x86 Assembly, SSE/AVX, Pthreads, and MPI. We also analyze the scaling of the algorithms’ running times with respect to the problem size and available resources, with suggestions on how to modify the code for future hardware architectures.
DOI: 10.6084/m9.figshare.19236780.v1
title: Thyroid Data Set

description: Adaptation of http://archive.ics.uci.edu/ml/datasets/Thyroid+Disease<br>Ready for usage with ehrapy
DOI: 10.6084/m9.figshare.20057093.v6
title: Data for Journal F1000: Physalis angulata Leaf Extract Ameliorates L-NAME-induced Preeclampsia Symptoms in Rats through Improved Endothelial Progenitor Cells and Endothelial Cells due to Reduced Antiangiogenic Factor and Oxidative Stress

description: Data for journal F1000 with title: Physalis angulata Leaf Extract Ameliorates L-NAME-induced Preeclampsia Symptoms in Rats through Improved Endothelial Progenitor Cells and Endothelial Cells due to Reduced Antiangiogenic Factor and Oxidative Stress, including: 1. LC-HRMS analyses of Physalis angulata leaf ethanol extract (Best Match and Best Similarity Match) 2. Raw data of all study variables 3. A completed ARRIVE checklist
DOI: 10.6084/m9.figshare.24147339.v1
title: Data table 3 for planned (TH-HIES) model.docx

description: Wind, solar, and imported energies values are listed in this table.
DOI: 10.6084/m9.figshare.5895757.v2
title: Supplemental_figures.pdf

description: Supplemental information
DOI: 10.17632/g857529zkw
title: Data for "Work Engagement in the Public Service: a multicultural model" published by RAC-Revista de Administração Contemporânea

description: The objective of this study is to propose a model to measure work engagement in Brazilian and Portuguese public service. The research is supported by a review of the literature that seeks to delineate the area of organizational behavior, the cross - cultural studies and the hypothetical theoretical model, which presents the ontological vision of the work. The unit of analysis are public institutions of both countries, the sample, which is of the convenience type, was composed of 609 respondents public servants. Three research instruments were used: the Articulación entre la Persona y la organización (APO) of Ramos, Jordão and Morais (2013); the Escala de Satisfação no Trabalho (EST) by Siqueira (2008); and the Utrecht Work Engagement Scale (UWES) tool by Schaufeli, Bakker & Salanova (2006). The results did not reject the hypotheses of the model, both of the Portuguese and Brazilian samples, and the comparison between them shows that in general the Portuguese are more satisfied and more engaged in the work than the Brazilians. The exception was observed only in the hypothetical factors Promotion and Salary.
DOI: 10.17632/f887wrzymk
title: LEARNING ATTITUDES OF JHS STUDENTS

description: This dataset includes the data collected to measure the learning attitudes of high school students enrolled in 42 secondary schools in Zamboanga City, Philippines, SY 2020-2021. It includes data across gender, grade level, age, and socio-economic status.
DOI: 10.6084/m9.figshare.11829306.v1
title: Prediction of human activity intensity using the interactions in physical and social spaces through graph convolutional networks

description: <b>Reference</b>: Mingxiao Li, Song Gao, Feng Lu, Kang Liu, Hengcai Zhang, Wei Tu. (2021) Prediction of human activity intensity using the interactions in physical and social spaces through graph convolutional networks. <i>International Journal of Geographical Information Science</i>. X(X), XX-XX.<b>Abstract</b>: Dynamic human activity intensity information is of great importance in many location-based applications. However, two limitations remain in the prediction of human activity intensity. First, it is hard to learn the spatial interaction patterns across scales for predicting human activities. Second, social interaction can help model the activity intensity variation but is rarely considered in the existing literature. To mitigate these limitations, we proposed a novel dynamic activity intensity prediction method with deep learning on graphs using the interactions in both physical and social spaces. In this method, the physical interactions and social interactions between spatial units were integrated into a fused graph convolutional network to model multi-type spatial interaction patterns. The future activity intensity variation was predicted by combining the spatial interaction pattern and the temporal pattern of activity intensity series. The method was verified with a country-scale anonymized mobile phone dataset. The results demonstrated that our proposed deep learning method with combining graph convolutional networks and recurrent neural networks outperformed other baseline approaches. This method enables dynamic human activity intensity prediction from a more spatially and socially integrated perspective, which helps improve the performance of modeling human dynamics.
DOI: 10.6084/m9.figshare.19460579.v1
title: n-cars.zip

description: The dataset from <b>https://www.prophesee.ai/dataset-n-cars-download. </b>If there is any infringement contact immediately delete.
DOI: 10.17632/xxjmr8sst8
title: ABORM Fellows Acupuncture PCOS

description: Data collection from the online survey of American Board of Oriental Reproductive Medicine (ABORM) Fellows: "Acupuncture for Polycystic Ovary Syndrome - a cross-sectional survey of clinical practice".
DOI: 10.6084/m9.figshare.21961064.v1
title: Raw data augmented reality

description: raw data, augmented reality
DOI: 10.6084/m9.figshare.24871725.v1
title: Raw Data Set for Goal Setting Paper

description: This is the raw data set used to examine how setting goals for specific behaviors moderates the association between health coaching and change in health behavior over a 12 week period. This data set includes all data, including missing and incomplete data, for baseline data time point and for three follow up timepoints.
DOI: 10.6084/m9.figshare.28428881.v1
title: Supplementary Material for: Maternal and Neonatal Factors Associated with Delayed Closure of Ductus Arteriosus in Term-Born Neonates: Insights from the Copenhagen Baby Heart Cohort Study

description: Background
The prenatal shunt, ductus arteriosus (DA), typically closes during the cardio-pulmonary transition at birth. We evaluated maternal and neonatal factors associated with delayed closure of DA in term-born neonates.

Method
We conducted a retrospective cohort study that included full-term neonates from the prospective observational Copenhagen Baby Heart cohort study. We assessed the association between maternal and neonatal factors and delayed ductal closure.

Results
We included 19,566 neonates, of whom 48% were female. Echocardiography was performed at a median age of 12 (IQR:9-15) and eight (IQR:2-13) days for neonates with no DA and an open DA, respectively. Associations with delayed ductal closure included maternal obesity adjusted risk ratio=2 (95%CI:1-3.8), maternal hypothyroidism during pregnancy aRR=2.02 (95%CI:1.2-3.4), low Apgar 2.6 (95%CI:1.2-6), high weight aRR=1.81(95%CI:1.2-2.6), and length at birth aRR=1.7(95%CI:1.1-2.6).

Conclusion
The identified risk factors for delayed ductal closure in term-born neonates may help increase clinical attention and improve neonatal care.
DOI: 10.6084/m9.figshare.14541774.v1
title: DepMap 21Q2 Public

description: This DepMap release contains data from CRISPR knockout screens from project Achilles, as well as genomic characterization data from the CCLE project. For more information, please see README.txt.<br><br>