cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.hajkmq
title: Occurrence Download

description: A dataset containing 84589 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Abies cephalonica Loudon, Abies cephalonica Link, 1842, Acacia dealbata Link, Acacia dealbata A.Cunn., Acacia mearnsii De Wild., Acacia mearnsii DeWild., Acacia provincialis A.Camus, Acacia pycnantha Benth., Acacia pycnantha Boiv., Acacia micrantha (Cav.) Domin)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 84589 records from 363 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006998-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dy6v2v
title: Occurrence Download

description: A dataset listing the 75 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Luxembourg",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is d02b7f80-1b78-11dd-be3c-b8a03c50a862"
 ]
}

 The dataset's 75 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006984-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4qj9c8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Polyommatus icarus (von Rottemburg, 1775)",
 "Year is 5",
 "Country is Netherlands"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007002-241107131044228/datasets/export for details.
DOI: 10.15468/dl.hgzhz3
title: Occurrence Download

description: A dataset containing 4321 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Excoecaria agallocha L."
 ]
}

 The dataset includes 4321 records from 131 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007003-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/9871270
title: Trending Youtube Video Statistics (113 Countries)
DOI: 10.15468/dl.zbswma
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pelophylax esculentus (Linnaeus, 1758)",
 "Year is 5",
 "Country is Netherlands"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007005-241107131044228/datasets/export for details.
DOI: 10.5281/zenodo.14065968
title: IMS Monitoring & Evaluation (M&E) Pre-Coded Excel Sheet
DOI: 10.5281/zenodo.14065969
title: IMS Monitoring & Evaluation (M&E) Pre-Coded Excel Sheet
DOI: 10.15468/dl.52b3q4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lissotriton vulgaris (Linnaeus, 1758)",
 "Year is 5",
 "Country is Netherlands"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007006-241107131044228/datasets/export for details.
DOI: 10.15468/dl.xh5hqe
title: Occurrence Download

description: A dataset containing 54335 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Eulophia R.Br."
 ]
}

 The dataset includes 54335 records from 395 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007004-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-4451/1
title: Data S1 Pavo cristatus N-block.pdb
DOI: 10.18419/darus-4451/11
title: Data S4 Pavo cristatus C-block.pdb
DOI: 10.18419/darus-4451/12
title: Data S3 Larus novaehollandiae N-block.pdb
DOI: 10.18419/darus-4451/5
title: Data S2 Gallus gallus N-block.pdb
DOI: 10.18419/darus-4451/7
title: Data S6 Pavo cristatus F-keratin filament precursor.pdb
DOI: 10.18419/darus-4451/9
title: Data S5 Pavo cristatus filament model.pdb
DOI: 10.18419/darus-4451/10
title: Data S9 settings2.mdp
DOI: 10.18419/darus-4451/13
title: Data S7 ions.mdp
DOI: 10.18419/darus-4451/17
title: Gromacs commands and workflow.txt
DOI: 10.18419/darus-4451/18
title: Larus N-block plDDT Plot.png
DOI: 10.18419/darus-4451/2
title: Figure S2 Pavo C-block angles.png
DOI: 10.18419/darus-4451/20
title: Gallus N-block plDDT Plot.png
DOI: 10.18419/darus-4451/21
title: Pavo C-block PAE Plot.png
DOI: 10.18419/darus-4451/22
title: Gallus N-block PAE Plot.png
DOI: 10.18419/darus-4451/3
title: Data S8 settings1.mdp
DOI: 10.18419/darus-4451/4
title: Figure S1 Pavo N-block angles.png
DOI: 10.18419/darus-4451/6
title: Movie S1 Fiber tilting simulation.mp4
DOI: 10.18419/darus-4451/14
title: Table S4 Pavo C-block angles.tab
DOI: 10.18419/darus-4451/15
title: Table S1 X-ray data
DOI: 10.18419/darus-4451/16
title: Table S2 Density compare.xlsx
DOI: 10.18419/darus-4451/19
title: SRQR Checklist.pdf
DOI: 10.18419/darus-4451/23
title: Larus N-block PAE Plot.png
DOI: 10.18419/darus-4451/8
title: Table S3 Pavo N-block angles.tab
DOI: 10.18419/darus-4451/24
title: Pavo N-block PLDDT Plot.png
DOI: 10.18419/darus-4451/25
title: Pavo C-block plDDT Plot.png
DOI: 10.18419/darus-4451
title: Data for: Feather keratin in Pavo cristatus: A tentative structure

description: Supplementary materials for the scientific study on “Feather keratin in Pavo cristatus: A tentative structure”.

The Dataset consists of .pdb files obtained by AlphaFold. Avian F-keratin sequences of Pavo, Gallus and Larus spec. were comparatively analyzed for prediction and visualization of representative 3D structures of N-block and C-block F-keratin precursors as recently proposed by P. Russ, H.O.K. Kirchner, H. Peterlik & I.M. Weiss. Corresponding Ramachandran analyses of calculated Pavo F-keratin N-block and C-block, included here as graphical plots and CSV files of Phi (φ) and Psi (ψ) angles, agree with previously published experimental data. Tables are included for comparison of experimental SAXS and calculated structural features of previous and new F-keratin models, with a focus on X-ray diffraction data and density calculations. The Dataset contains relevant computational settings and describes the methodological workflow, especially for GROMACS simulations. A MPEG-4 Video file is included which shows a truncated version of Pavo F-keratin in water. This result confirms that the proposed protein folding and assembly mechanism would, in principle, be compatibel with tilting and stability of amorphous F-keratin filament precursors, a mandatory prerequisite for solidification into a biogenic super-alloy.
DOI: 10.18419/darus-4451/26
title: Pavo N-block PAE plot.png
DOI: 10.15468/dl.fe8xht
title: Occurrence Download

description: A dataset containing 197309 species occurrences available in GBIF matching the query:
{
 "InstitutionKey" : [
 "is afe26ff9-a865-4074-a80f-00ae5b2f8315"
 ]
}

 The dataset includes 197309 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006997-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2r73yz
title: Occurrence Download

description: A dataset containing 140 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Avicennia marina (Forssk.) Vierh.",
 "Year 1970-2024"
 ]
}

 The dataset includes 140 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007007-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kq879y
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Troglodytes troglodytes (Linnaeus, 1758)",
 "Year is 6",
 "Country is Netherlands"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007008-241107131044228/datasets/export for details.
DOI: 10.15468/dl.x8r75d
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Cuba",
 "DatasetKey is one of (The New York Botanical Garden Herbarium (NY), iNaturalist Research-grade Observations, Harvard University Herbaria: All Records, Louisiana State University, Shirley C. Tucker Herbarium - Vascular Plants, RSA - California Botanic Garden Herbarium, Digitalización y Sistematización de las Colecciones Biológicas Nacionales del Instituto de Biología, UNAM (Plantas vasculares))",
 "OccurrenceStatus is Present",
 "TaxonKey is Salicornia bigelovii Torr."
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007009-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.apgncu
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acacia synantha Maslin, M.D.Barrett & R.L.Barrett, Acacia micrantha Benth., Acacia micrantha Desv., Acacia pinnata Dalzell & A.Gibson, Acacia pinnata Link, Acacia micrantha Ham., 1825)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 15 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007011-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gz9yjt
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.19_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Artemisia japonica var. manshurica Kom."
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068361-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yj94rd
title: Occurrence Download

description: A dataset containing 3551 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "Issue is one of (Zero coordinate, Coordinate out of range, Coordinate invalid, Coordinate rounded, Geodetic datum invalid, Geodetic datum assumed WGS84, Coordinate reprojected, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate accuracy invalid, Coordinate precision invalid, Coordinate uncertainty meters invalid, Coordinate precision/uncertainty mismatch, Footprint SRS invalid, Footprint WKT mismatch, Footprint WKT invalid, Country coordinate mismatch, Country mismatch, Country invalid, Country derived from coordinates, Continent coordinate mismatch, Continent country mismatch, Continent invalid, Continent derived from country, Continent derived from coordinates, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Recorded date invalid, Recorded date unlikely, Taxon match fuzzy, Taxon match higher rank, Taxon match aggregate, The scientific name ID was not used in backbone matching, The taxon concept ID was not used in backbone matching, The taxon ID was not used in backbone matching, The scientific name ID was not found in the checklist, The taxon concept ID was not found in the checklist, The taxon ID was not found in the checklist, The scientific name differs on the record from that found in the checklist, Taxon match none, The backbone match found using the taxon IDs differs from what would be found if using the scientific names, Depth not metric, Depth unlikely, Depth min max swapped, Depth non numeric, Elevation unlikely, Elevation min max swapped, Elevation not metric, Elevation non numeric, Modified date invalid, Modified date unlikely, Identified date unlikely, Identified date invalid, Basis of record invalid, Type status invalid, Multimedia date invalid, References URI invalid, Error during interpretation, Individual count invalid, Individual count conflicts with occurrence status, Occurrence status unparsable, Occurrence status inferred from individual count, ccurrence status inferred from basis of record, Georeferenced date unlikely, Georeferenced date invalid, Ambiguous institution, Ambiguous collection, Institution match none, Collection match none, Institution match fuzzy, Collection match fuzzy, Institution collection mismatch, Possibly on loan, Different owner institution)",
 "OccurrenceStatus is Present",
 "TaxonKey is Austropuccinia psidii (G.Winter) Beenken"
 ]
}

 The dataset includes 3551 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068365-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7yw5e8
title: Occurrence Download

description: A dataset containing 415 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zosterisessor ophiocephalus (Pallas, 1814)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen, Material sample)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 415 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004415-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.85sfyz
title: Occurrence Download

description: A dataset containing 23291 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyperus odoratus L."
 ]
}

 The dataset includes 23291 records from 619 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002362-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q3n8sy
title: Occurrence Download

description: A dataset containing 1814 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eragrostis aspera (Jacq.) Nees",
 "Continent is Africa"
 ]
}

 The dataset includes 1814 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002363-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dcssfr
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Herminium alaschanicum Maxim.",
 "Year 1970-2000"
 ]
}

 The dataset includes 121 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002364-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4wmzjg
title: Occurrence Download

description: A dataset containing 907 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Lepus saxatilis F.Cuvier, 1823"
 ]
}

 The dataset includes 907 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002367-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/9832583
title: Forex Exchange Rates Since 2004 (Updated Daily)
DOI: 10.15468/dl.c6bmdt
title: Occurrence Download

description: A dataset containing 1667 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eragrostis atrovirens (Desf.) Trin. ex Steud.",
 "Continent is Africa"
 ]
}

 The dataset includes 1667 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002368-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10409767
title: Supplementary dataset to publication: Oxford nanopore technologies - a valuable tool to generate whole-genome sequencing data for in silico serotyping and the detection of genetic markers in Salmonella, Thomas et al 2023

description: Bacteria of the genus Salmonella pose a major risk to livestock, the food economy, and public health. Salmonella infections are one of the leading causes of food poisoning. The identification of serovars of Salmonella achieved by their diverse surface antigens is essential to gain information on their epidemiological context. Traditionally, slide agglutination has been used for serotyping. In recent years, whole-genome sequencing (WGS) followed by in silico serotyping has been established as an alternative method for serotyping and the detection of genetic markers for Salmonella. Until now, WGS data generated with Illumina sequencing are used to validate in silico serotyping methods. Oxford Nanopore Technologies (ONT) opens the possibility to sequence ultra-long reads and has frequently been used for bacterial sequencing. In this study, ONT sequencing data of 28 Salmonella strains of different serovars with epidemiological relevance in humans, food, and animals were taken to investigate the performance of the in silico serotyping tools SISTR and SeqSero2 compared to traditional slide agglutination tests. Moreover, the detection of genetic markers for resistance against antimicrobial agents, virulence, and plasmids was studied by comparing WGS data based on ONT with WGS data based on Illumina. Based on the ONT data from flow cell version R9.4.1, in silico serotyping achieved an accuracy of 96.4 and 92% for the tools SISTR and SeqSero2, respectively. Highly similar sets of genetic markers comparing both sequencing technologies were identified. Taking the ongoing improvement of basecalling and flow cells into account, ONT data can be used for Salmonella in silico serotyping and genetic marker detection.
description: Link URL: https://www.ebi.ac.uk/ena/browser/view/PRJEB59466

Sequencing data was submitted to ENA and is available under acession number PRJEB59466
DOI: 10.6084/m9.figshare.28768577
title: Anexe teza doctorat

description: Appendices for PhD dissertation
DOI: 10.15468/dl.owy6ea
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Natural History Museum (London) Collection Specimens",
 "TaxonKey is Papio papio (Desmarest, 1820)"
 ]
}

 The dataset includes 22 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006057-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kktrkd
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crepis trichosticta Gand."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0152169-230224095556074/datasets/export for details.
DOI: 10.15468/dl.bnqtec
title: Occurrence Download

description: A dataset containing 173 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Myotis thysanodes Miller, 1897",
 "Country is Mexico",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 173 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006058-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uujehy
title: Occurrence Download

description: A dataset containing 840084 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Limosa limosa (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 840084 records from 520 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016751-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rvuats
title: Occurrence Download

description: A dataset containing 734 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Peces presentes en la colección Ictiológica CIACOL asociados a la región de Mitú, cuenca media del Río Vaupés"
 ]
}

 The dataset includes 734 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041351-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xiufih
title: Occurrence Download

description: A dataset containing 252 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 2) Occurrence and estimated abundance of planktonic foraminifers at DSDP Hole 85-571"
 ]
}

 The dataset includes 252 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006058-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.i0afdl
title: Occurrence Download

description: A dataset containing 10204 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Imperatoria ostruthium L."
 ]
}

 The dataset includes 10204 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006058-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fu6e97
title: Occurrence Download

description: A dataset containing 221 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dalbergia ovata Graham ex Benth."
 ]
}

 The dataset includes 221 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020461-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.