cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3994032
title: Dataset for: Majority of olfactory-receptor neurons have individually neutral effects on behavior

description: <strong>Summary</strong> Animals use olfactory receptors to navigate danger, mates, and food. However, for complex olfactory systems, it is unknown what proportion of olfactory-receptor neurons (ORNs) can individually drive avoidance or attraction. Similarly it is unclear what rules govern behavioral responses to ORN-activity combinations. We used optogenetic analysis in Drosophila to map the behavior elicited by nearly all ORN classes; just one-fifth of ORNs drove either avoidance or attraction. Although wind and hunger are closely linked to olfaction, neither context had much effect on single-ORN-class behavior. Various models have been used to explain the way multiple ORNs combine their behavioral influences, including several simple pooling rules. To assess these, we activated two-way combinations and compared patterns of single- and double-ORN responses: these comparisons were inconsistent with simple pooling. We conclude that the majority of ORN types have neutral behavioral effects individually, but participate in broad, odor-elicited ensembles with potent behavioral effects arising from complex interactions.
DOI: 10.21227/xw5z-mb47
title: Effects of a Powered Knee-Ankle Prosthesis on Amputee Hip Compensations: A Case Series

description: Gait with passive prostheses often exhibit compensations due to the lack of push-off power of the prosthetic ankle. Powered prostheses can restore some functionality, but there is little evidence that shows their effect on compensatory behaviors, specifically at the residual hip. This paper is aimed at investigating how powered prostheses can be leveraged to mitigate residual hip compensations. Walking experiments were conducted with three transfemoral amputees using a low-impedance powered knee-ankle prosthesis compared to their day-to-day passive prosthesis. A walking controller was implemented on the powered prosthesis to exploit the low-impedance actuators' power density during push-off, impedance control abilities in stance, and trajectory tracking abilities to ensure prosthetic toe-clearance during swing. Experiments show that when large prosthetic ankle push-off power is utilized, less mechanical power is demanded from the residual hip to progress the limb forward. Moreover, all subjects displayed increased step length (by ~60mm and propulsive impulses for the prosthetic side, compared to their passive prostheses. This reduced residual hip work used to accelerate the body forward by ~15%, and improved gait symmetry. Results on hip circumduction were mixed, but improved for subjects who had previously exhibited this compensation on their passive prosthesis. These improvements in gait, especially reduced residual hip power and work, have the potential to reduce fatigue and overuse injuries in persons with transfemoral amputation.
DOI: 10.6084/m9.figshare.4736614
title: Effects of air on microbial community and tailing wastewater remediation in reducing bacteria remediation process

description: To research the effects of air on tailing wastewater remediation and microbial community in reducing bacteria remediation process, the experiments of air utilization were conducted. The physiochemical properties were determined using ICP, XRD, and microbial community structure was investigated by MiSeq high throughput sequencing. The results indicated air simultaneously promoted the oxidizing of sulfur and reducing of sulfate. Air had no effect on redox potential, but the differences of pH, dissolved sulfur and dissolved iron were obvious (<i>p</i>&lt;0.05). Air increased the concentration of dissolved sulfur and lowered pH. However, air increased the percentage of <i>Desulfosporosinus</i> and the producing of iron sulfide, and reduced the metal ion concentration.
DOI: 10.6084/m9.figshare.4736605
title: Supercritical Carbon Dioxide Heat Transfer Data for 0.75 mm Square Microchannels with Single-Side Heated Boundary Condition at Reduced Pressure from 1.03 to 1.1

description: The following set of data was taken at Oregon State University in the Thermal Energy Systems and Transport (TEST) Laboratory. Six different testing conditions were investigated with a total of 90 data points, varying the 1.) reduced pressure (P/Pcrit of 1.03 and 1.1) 2.) mass flux (500 and 1000 kg/m^2-s)3.) inlet temperature (Tin 20C to 100C) and 4.) applied heat flux (q" 20 and 40 W/cm^2). The applied heat flux is on a single side surface with a length of 20 mm, more dimension details can be found in the attached dataset. <br>The data here was evaluated for an average heat transfer coefficient using three local measurements. The images in the attached file can assist with understanding where the testing condition data are measured. The three local flux meter temperatures ([1] - [3]) are average at each of the locations (A and B), which provides an average on the flux meter for evaluating the heat flux, wall temperature, and ultimately the heat transfer coefficient. <br>The 'Testing Condition Data' is all of the recorded and average testing data that is used to calculated important quantities. The rest of the sheets are for each of the individual testing cases (see right); the names are broken up in three parts (#_#_#). The first number defines the reduced pressure (PR), the second number describes the mass flux (G), and third number describes the applied heat flux (q").<br>For more details regarding the experiments, results, and conclusions, the M.S. thesis for this work can be found at (click on 'view/open'): https://ir.library.oregonstate.edu/xmlui/handle/1957/60592<br><br>
DOI: 10.6084/m9.figshare.4736605.v1
title: Supercritical Carbon Dioxide Heat Transfer Data for 0.75 mm Square Microchannels with Single-Side Heated Boundary Condition at Reduced Pressure from 1.03 to 1.1

description: The following set of data was taken at Oregon State University in the Thermal Energy Systems and Transport (TEST) Laboratory. Six different testing conditions were investigated with a total of 90 data points, varying the 1.) reduced pressure (P/Pcrit of 1.03 and 1.1) 2.) mass flux (500 and 1000 kg/m^2-s)3.) inlet temperature (Tin 20C to 100C) and 4.) applied heat flux (q" 20 and 40 W/cm^2). The applied heat flux is on a single side surface with a length of 20 mm, more dimension details can be found in the attached dataset. <br>The data here was evaluated for an average heat transfer coefficient using three local measurements. The images in the attached file can assist with understanding where the testing condition data are measured. The three local flux meter temperatures ([1] - [3]) are average at each of the locations (A and B), which provides an average on the flux meter for evaluating the heat flux, wall temperature, and ultimately the heat transfer coefficient. <br>The 'Testing Condition Data' is all of the recorded and average testing data that is used to calculated important quantities. The rest of the sheets are for each of the individual testing cases (see right); the names are broken up in three parts (#_#_#). The first number defines the reduced pressure (PR), the second number describes the mass flux (G), and third number describes the applied heat flux (q").<br>For more details regarding the experiments, results, and conclusions, the M.S. thesis for this work can be found at (click on 'view/open'): https://ir.library.oregonstate.edu/xmlui/handle/1957/60592<br><br>
DOI: 10.6084/m9.figshare.4736587
title: Detection of anatoxin-producing <i>Phormidium</i> in a New Zealand farm pond and an associated dog death

description: Over the last decade, proliferations of benthic mat-forming <i>Phormidium</i> have been reported with increasing frequency in New Zealand’s cobble-bed rivers. The dominant species within these mats (<i>Phormidium autumnale</i>) commonly produces a range of neurotoxins, collectively known as anatoxins. Ingestion of toxic <i>Phormidium</i>-dominated mats has resulted in the death of an estimated 100 dogs at New Zealand’s rivers since 2005. In September 2014, a 12-week-old border terrier died rapidly after contact with floating ‘algal mats’ at a small farm pond near Kaikoura (South Island, New Zealand). The aim of this study was to establish whether ingestion of the algal mats was the cause of the death and if the dominant species was similar to that found in rivers. Environmental samples from the pond and the dog’s stomach contents contained moderate levels of anatoxin-<i>a</i> (25 µg L<sup>−1</sup> and 36 µg kg<sup>−1</sup> wet weight, respectively) and high levels of dihydroanatoxin-<i>a</i> (2,118 µg L<sup>−1</sup> and 4,437 µg kg<sup>−1</sup>, respectively). The dominant organism in the environmental sample was cultured and a polyphasic approach used for characterisation. Morphological analysis of environmental samples and six isolates indicated the dominant species was most similar to <i>Ph. autumnale.</i> Further confirmation was provided by 16S ribosomal RNA gene sequences which showed a high percentage identity (≥ 99%) to strains isolated from <i>Phormidium</i>-dominated mats in New Zealand rivers. Identification of anatoxin-<i>a</i> and dihydroanatoxin-<i>a</i> in the stomach contents, environmental samples and isolates, in concert with the rapid dog death provide strong evidence that anatoxin poisoning was the cause of death. To our knowledge this is the first report in New Zealand of a dog death related to ingestion of toxic <i>Phormidium</i> mats from a farm pond. This study highlights the wide diversity of habitats that toxin-producing <i>Phormidium</i> can inhabit, and the need for greater awareness of the risks <i>Phormidium</i>-dominated mats pose to human and animal health.
DOI: 10.6084/m9.figshare.4736587.v1
title: Detection of anatoxin-producing <i>Phormidium</i> in a New Zealand farm pond and an associated dog death

description: Over the last decade, proliferations of benthic mat-forming <i>Phormidium</i> have been reported with increasing frequency in New Zealand’s cobble-bed rivers. The dominant species within these mats (<i>Phormidium autumnale</i>) commonly produces a range of neurotoxins, collectively known as anatoxins. Ingestion of toxic <i>Phormidium</i>-dominated mats has resulted in the death of an estimated 100 dogs at New Zealand’s rivers since 2005. In September 2014, a 12-week-old border terrier died rapidly after contact with floating ‘algal mats’ at a small farm pond near Kaikoura (South Island, New Zealand). The aim of this study was to establish whether ingestion of the algal mats was the cause of the death and if the dominant species was similar to that found in rivers. Environmental samples from the pond and the dog’s stomach contents contained moderate levels of anatoxin-<i>a</i> (25 µg L<sup>−1</sup> and 36 µg kg<sup>−1</sup> wet weight, respectively) and high levels of dihydroanatoxin-<i>a</i> (2,118 µg L<sup>−1</sup> and 4,437 µg kg<sup>−1</sup>, respectively). The dominant organism in the environmental sample was cultured and a polyphasic approach used for characterisation. Morphological analysis of environmental samples and six isolates indicated the dominant species was most similar to <i>Ph. autumnale.</i> Further confirmation was provided by 16S ribosomal RNA gene sequences which showed a high percentage identity (≥ 99%) to strains isolated from <i>Phormidium</i>-dominated mats in New Zealand rivers. Identification of anatoxin-<i>a</i> and dihydroanatoxin-<i>a</i> in the stomach contents, environmental samples and isolates, in concert with the rapid dog death provide strong evidence that anatoxin poisoning was the cause of death. To our knowledge this is the first report in New Zealand of a dog death related to ingestion of toxic <i>Phormidium</i> mats from a farm pond. This study highlights the wide diversity of habitats that toxin-producing <i>Phormidium</i> can inhabit, and the need for greater awareness of the risks <i>Phormidium</i>-dominated mats pose to human and animal health.
DOI: 10.6084/m9.figshare.4736614.v2
title: Effects of air on microbial community and tailing wastewater remediation in reducing bacteria remediation process

description: To research the effects of air on tailing wastewater remediation and microbial community in reducing bacteria remediation process, the experiments of air utilization were conducted. The physiochemical properties were determined using ICP, XRD, and microbial community structure was investigated by MiSeq high throughput sequencing. The results indicated air simultaneously promoted the oxidizing of sulfur and reducing of sulfate. Air had no effect on redox potential, but the differences of pH, dissolved sulfur and dissolved iron were obvious (<i>p</i>&lt;0.05). Air increased the concentration of dissolved sulfur and lowered pH. However, air increased the percentage of <i>Desulfosporosinus</i> and the producing of iron sulfide, and reduced the metal ion concentration.
DOI: 10.6084/m9.figshare.4736614.v1
title: New draft item

description: To research the effects of air on tailing wastewater remediation and microbial community in reducing bacteria remediation process, the experiments of air utilization were conducted. The physiochemical properties were determined using ICP, XRD, and microbial community structure was investigated by MiSeq high throughput sequencing. The results indicated air simultaneously promoted the oxidizing of sulfur and reducing of sulfate. Air had no effect on redox potential, but the differences of pH, dissolved sulfur and dissolved iron were obvious (<i>p</i>&lt;0.05). Air increased the concentration of dissolved sulfur and lowered pH. However, air increased the percentage of <i>Desulfosporosinus</i> and the producing of iron sulfide, and reduced the metal ion concentration.
DOI: 10.6084/m9.figshare.4736494
title: Toklat Glacier Supraglacial Transect

description: 16S rDNA and 18S rDNA sequence data and metadata for a transect across the top of the Middle Fork Toklat Glacier in Denali National Park and Preserve, Alaska. <br>
DOI: 10.6084/m9.figshare.4736494.v1
title: Toklat Glacier Supraglacial Transect

description: 16S rDNA and 18S rDNA sequence data and metadata for a transect across the top of the Middle Fork Toklat Glacier in Denali National Park and Preserve, Alaska. <br>
DOI: 10.6084/m9.figshare.4736383
title: New remains of <i>Siamotherium pondaungensis</i> (Cetartiodactyla, Hippopotamoidea) from the Eocene of Pondaung, Myanmar: Paleoecologic and phylogenetic implications

description: We describe an exceptionally well preserved skull of a small anthracothere from the late middle Eocene of the Pondaung Formation that can be confidently attributed to <i>Siamotherium pondaungensis</i>, a species that was first diagnosed on the basis of a fragmentary maxilla preserving two upper molars. The new material confirms that <i>Siamotherium pondaungensis</i> is an anthracothere and not a helohyid as repeatedly suggested. According to its dentition and skull structure, <i>Siamotherium pondaungensis</i> was most likely a terrestrial, open-forest animal with an omnivorous diet that showed no significant adaptation to folivory. A phylogenetic analysis that includes both species of <i>Siamotherium</i> confirms their basal position within the Hippopotamoidea. SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at www.tandfonline.com/UJVP Citation for this article: Soe, Aung Naing, O. Chavasseau, Y. Chaimanee, Chit Sein, J.-J. Jaeger, X. Valentin, and S. Ducrocq. 2017. New remains of <i>Siamotherium pondaungensis</i> (Cetartiodactyla, Hippopotamoidea) from the Eocene of Pondaung, Myanmar: Paleoecologic and phylogenetic implications. Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2017.1270290.
DOI: 10.6084/m9.figshare.4736383.v1
title: New remains of <i>Siamotherium pondaungensis</i> (Cetartiodactyla, Hippopotamoidea) from the Eocene of Pondaung, Myanmar: Paleoecologic and phylogenetic implications

description: We describe an exceptionally well preserved skull of a small anthracothere from the late middle Eocene of the Pondaung Formation that can be confidently attributed to <i>Siamotherium pondaungensis</i>, a species that was first diagnosed on the basis of a fragmentary maxilla preserving two upper molars. The new material confirms that <i>Siamotherium pondaungensis</i> is an anthracothere and not a helohyid as repeatedly suggested. According to its dentition and skull structure, <i>Siamotherium pondaungensis</i> was most likely a terrestrial, open-forest animal with an omnivorous diet that showed no significant adaptation to folivory. A phylogenetic analysis that includes both species of <i>Siamotherium</i> confirms their basal position within the Hippopotamoidea. SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at www.tandfonline.com/UJVP Citation for this article: Soe, Aung Naing, O. Chavasseau, Y. Chaimanee, Chit Sein, J.-J. Jaeger, X. Valentin, and S. Ducrocq. 2017. New remains of <i>Siamotherium pondaungensis</i> (Cetartiodactyla, Hippopotamoidea) from the Eocene of Pondaung, Myanmar: Paleoecologic and phylogenetic implications. Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2017.1270290.
DOI: 10.6084/m9.figshare.4736341
title: Osteology and relationships of <i>Colymbosaurus</i> Seeley, 1874, based on new material of <i>C. svalbardensis</i> from the Slottsmøya Member, Agardhfjellet Formation of central Spitsbergen

description: <i>Colymbosaurus</i> is a genus of long-necked plesiosaurian represented by two valid species: <i>C</i>. <i>megadeirus</i> from the Upper Kimmeridge Clay Formation (Kimmeridgian–Tithonian) of the United Kingdom and <i>C. svalbardensis</i> from the Slottsmøya Member of the Agardhfjellet Formation (Tithonian–Berriasian) of Svalbard, Norway. Due to the lack of complete and articulated skeletons and a near absence of cranial material, <i>Colymbosaurus</i> has been problematic to characterize morphologically. Here, we describe and conduct a phylogenetic analysis on an informative new specimen referable to <i>C. svalbardensis</i> from the Slottsmøya Member, preserving a large portion of the axial and appendicular skeleton. The new material contributes important new osteological data for the species and together with an extensive examination of congeners in British museums, clarifies the diagnostic characters of the genus. We provide two new diagnostic characters of the epipodials for the genus and reevaluate the utility of an anteroposteriorly oriented bisecting ridge on the distal end of the propodials. We also present two new diagnostic features for <i>C. svalbardensis</i> regarding the neural canal and femoral morphology. A phylogenetic analysis recovers a monophyletic and well-supported <i>Colymbosaurus</i>. The new specimen of <i>C. svalbardensis</i> confirms that this species is not synonymous with other described Slottsmøya Member plesiosauroids, demonstrating considerable diversity of the clade at high latitudes close to the Jurassic–Cretaceous boundary. SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at www.tandfonline.com/UJVP Citation for this article: Roberts, A. J., P. S. Druckenmiller, L. L. Delsett, and Jørn H. Hurum. 2017. Osteology and relationships of <i>Colymbosaurus</i> Seeley, 1874, based on new material of <i>C. svalbardensis</i> from the Slottsmøya Member, Agardhfjellet Formation of central Spitsbergen. Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2017.1278381.
DOI: 10.6084/m9.figshare.4736341.v1
title: Osteology and relationships of <i>Colymbosaurus</i> Seeley, 1874, based on new material of <i>C. svalbardensis</i> from the Slottsmøya Member, Agardhfjellet Formation of central Spitsbergen

description: <i>Colymbosaurus</i> is a genus of long-necked plesiosaurian represented by two valid species: <i>C</i>. <i>megadeirus</i> from the Upper Kimmeridge Clay Formation (Kimmeridgian–Tithonian) of the United Kingdom and <i>C. svalbardensis</i> from the Slottsmøya Member of the Agardhfjellet Formation (Tithonian–Berriasian) of Svalbard, Norway. Due to the lack of complete and articulated skeletons and a near absence of cranial material, <i>Colymbosaurus</i> has been problematic to characterize morphologically. Here, we describe and conduct a phylogenetic analysis on an informative new specimen referable to <i>C. svalbardensis</i> from the Slottsmøya Member, preserving a large portion of the axial and appendicular skeleton. The new material contributes important new osteological data for the species and together with an extensive examination of congeners in British museums, clarifies the diagnostic characters of the genus. We provide two new diagnostic characters of the epipodials for the genus and reevaluate the utility of an anteroposteriorly oriented bisecting ridge on the distal end of the propodials. We also present two new diagnostic features for <i>C. svalbardensis</i> regarding the neural canal and femoral morphology. A phylogenetic analysis recovers a monophyletic and well-supported <i>Colymbosaurus</i>. The new specimen of <i>C. svalbardensis</i> confirms that this species is not synonymous with other described Slottsmøya Member plesiosauroids, demonstrating considerable diversity of the clade at high latitudes close to the Jurassic–Cretaceous boundary. SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at www.tandfonline.com/UJVP Citation for this article: Roberts, A. J., P. S. Druckenmiller, L. L. Delsett, and Jørn H. Hurum. 2017. Osteology and relationships of <i>Colymbosaurus</i> Seeley, 1874, based on new material of <i>C. svalbardensis</i> from the Slottsmøya Member, Agardhfjellet Formation of central Spitsbergen. Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2017.1278381.
DOI: 10.6084/m9.figshare.4736323
title: The habit plane of 〈a〉-type dislocation loops in α-zirconium: an atomistic study

description: We use both a model of dislocation energy and molecular dynamics (MD) simulations to explore the habit planes of <b>〈</b>a〉-type dislocation loops, while cascade simulations are produced to investigate the effect of irradiation on those loops. Vacancy and interstitial loops are artificially created on perfect prism planes in MD, and they reorient to their preferred habit planes during a relaxation stage. The statistics presented in stereographic projections show that the preferred habit planes are close to the prism plane , consistent with experimental data from the literature. We also confirm that the angle between the Burgers vector and the loop’s plane is a useful parameter when identifying the stability of <b>〈</b>a〉-type dislocation loops.
DOI: 10.6084/m9.figshare.4735087
title: Synopsis of the 30 episodes of Every Moment of Your Life

description: Synopsis of the 30 episodes of Every Moment of Your Life
DOI: 10.6084/m9.figshare.4733674
title: Processed Ngram data

description: Processed Ngram matrices containing bi-gram association strengths<br>
DOI: 10.6084/m9.figshare.4733674.v1
title: Processed Ngram data

description: Processed Ngram matrices containing bi-gram association strengths<br>
DOI: 10.6084/m9.figshare.4735087.v1
title: Synopsis of the 30 episodes of Every Moment of Your Life

description: Synopsis of the 30 episodes of Every Moment of Your Life