cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24845235
title: Data from: Strog benefits of hedgerows to bats in three European winegrowing regions.csv

description: All_data: csv file containing the flight and foraging activity of bats, as well as landscape characterization for each of the vineyards studied in the three countries included in the study (see Metada_All_data).Bat_Activity_Austria: csv file containing the raw data on flight and feeding activity at species level for Austria (see Metadata_Bat_Activity_Country)Bat_Activity_Germany: csv file containing the raw data on flight and feeding activity at species level for Germany (see Metadata_Bat_Activity_Country)Bat_Activity_Spain: csv file containing the raw data on flight and feeding activity at species level for Spain (see Metadata_Bat_Activity_Country)Metada_files: Files containing abbreviations and explanations of the columns of .csv files
DOI: 10.6084/m9.figshare.24845235.v2
title: Data from: Strog benefits of hedgerows to bats in three European winegrowing regions.csv

description: All_data: csv file containing the flight and foraging activity of bats, as well as landscape characterization for each of the vineyards studied in the three countries included in the study (see Metada_All_data).Bat_Activity_Austria: csv file containing the raw data on flight and feeding activity at species level for Austria (see Metadata_Bat_Activity_Country)Bat_Activity_Germany: csv file containing the raw data on flight and feeding activity at species level for Germany (see Metadata_Bat_Activity_Country)Bat_Activity_Spain: csv file containing the raw data on flight and feeding activity at species level for Spain (see Metadata_Bat_Activity_Country)Metada_files: Files containing abbreviations and explanations of the columns of .csv files
DOI: 10.17863/cam.22310
title: Research data supporting 'Pendant drops shed from a liquid lens formed by liquid draining down the inner wall of a wide vertical tube'

description: Excel spreadsheet summarising all experimental results
DOI: 10.6084/m9.figshare.c.3632447_d4.v1
title: Additional file 9: Table S9. of Gene expression analysis in Fmr1KO mice identifies an immunological signature in brain tissue and mGluR5-related signaling in primary neuronal cultures

description: Significance of overlap for hippocampal or cortical cultures and embryonic brain tissues of KO/WT up/down/combine differentially expressed genes AND MGI genes with behavioral/neurological phenotype ( http://www.informatics.jax.org/searches/Phat.cgi?id=MP:0005386 ). Fisherâ  s exact test was used to calculate the statistics. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3632435_d5.v1
title: MOESM1 of Enhanced detection with spectral imaging fluorescence microscopy reveals tissue- and cell-type-specific compartmentalization of surface-modified polystyrene nanoparticles

description: Additional file 1: Raw results of characterization experiments. PS-NPs were incubated with inorganic or biological solutions. After 5-min, 4, 24 or 96 h incubation size distribution and zeta-potential measurements were carried out by a ZetasizerNano ZS90.
DOI: 10.6084/m9.figshare.c.3632447_d5.v1
title: Additional file 8: Table S8. of Gene expression analysis in Fmr1KO mice identifies an immunological signature in brain tissue and mGluR5-related signaling in primary neuronal cultures

description: Unique and annotated mouse genes after differential gene expression analysis in four systems. Mapping to MGI genes, human SFARI genes, and FMRP targets. (XLSX 4 mb)
DOI: 10.6084/m9.figshare.c.3632447_d6.v1
title: Additional file 1: Table S1. of Gene expression analysis in Fmr1KO mice identifies an immunological signature in brain tissue and mGluR5-related signaling in primary neuronal cultures

description: Genes associated with defects in cognitive development: MGI, SFARI, and FMRP targets. (XLSX 111 kb)
DOI: 10.6084/m9.figshare.c.3632474_d1.v1
title: Additional file 1 of A model of the spatial tumour heterogeneity in colorectal adenocarcinoma tissue

description: File textFeat.xsl. Texture feature profiles for phenotypes found in the real data. Phenotypes are obtained based on the Haralick texture features shown in the table. For each feature the mean is shown in the first column and the standard deviation in the second column. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.c.3632447_d13.v1
title: Additional file 11: Table S11. of Gene expression analysis in Fmr1KO mice identifies an immunological signature in brain tissue and mGluR5-related signaling in primary neuronal cultures

description: Significance of overlap for hippocampal or cortical cultures and embryonic brain tissues of KO/WT up/down/combine differentially expressed genes AND FMRP binding targets. Fisherâ  s exact test was used to calculate the statistics. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3632477_d7.v1
title: Additional file 5: Table S6. of Identification of therapeutic targets applicable to clinical strategies in ovarian cancer

description: siRNA validation screen result of 55 candidate targets in 6 ovarian cancer cell lines. (XLS 90Â kb)
DOI: 10.6084/m9.figshare.c.3632447_d14.v1
title: Additional file 4: Table S4. of Gene expression analysis in Fmr1KO mice identifies an immunological signature in brain tissue and mGluR5-related signaling in primary neuronal cultures

description: Detailed KEGG pathway-enrichment analysis of differentially expressed genes between KO and WT mice. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.c.3632498_d2.v1
title: Additional file 11: of Genome-wide identification and evolutionary analysis of leucine-rich repeat receptor-like protein kinase genes in soybean

description: Putative artificial selected GmLRR-RLKs during soybean domestication. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3632498_d3.v1
title: Additional file 7: of Genome-wide identification and evolutionary analysis of leucine-rich repeat receptor-like protein kinase genes in soybean

description: Estimates of the dates for the segmental duplication events of LRR-RLK gene family in soybean. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.c.3632477_d10.v1
title: Additional file 1: Table S1. of Identification of therapeutic targets applicable to clinical strategies in ovarian cancer

description: Qiagen siRNA IDs, their sequences, and plate layout. (XLS 53Â kb)
DOI: 10.6084/m9.figshare.c.3632519_d2.v1
title: Additional file 2: Table S2. of Functional classification of rice flanking sequence tagged genes using MapMan terms and global understanding on metabolic and regulatory pathways affected by dxr mutant having defects in light response

description: List of differentially expressed genes (DEGs) of Agrobacterium infected rice embryogenic calli at 1 h, 6 h, 12 h and 24 h for japonica rice cultivar Nipponbare and indica rice cultivar Zhenshan 97. (XLSX 1579 kb)
DOI: 10.6084/m9.figshare.c.3632498_d5.v1
title: Additional file 6: of Genome-wide identification and evolutionary analysis of leucine-rich repeat receptor-like protein kinase genes in soybean

description: Soybean LRR-RLK genes located in tandem duplication clusters. A region containing two or more soybean LRR-RLK genes within 200Â kb was defined as a tandem duplication cluster. The gene ID, subgroups, and chromosome of each GmLRR-RLK located in tandem duplication clusters were presented. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3632519_d3.v1
title: Additional file 6: Table S5.  of Functional classification of rice flanking sequence tagged genes using MapMan terms and global understanding on metabolic and regulatory pathways affected by dxr mutant having defects in light response

description: Functional classification of FST genes using GO terms in biological process and molecular function categories. (XLSX 1349Â kb)
DOI: 10.17863/cam.53220
title: Research data supporting "Time-resolved open-circuit conductive atomic force microscopy for direct electromechanical characterisation"

description: These files contain the original AFM files and outputs of the experiments described in the paper. As such they were obtained using the Bruker Icon AFM and have either two dimensional scans containing topography and current at different biases when scanning atop nanowires, or current vs. deflection (or height) obtained as the AFM cantilever was driven towards the sample. To be viewed using AFM software or any data software in case of txt files.
DOI: 10.6084/m9.figshare.c.3632519_d4.v1
title: Additional file 5: Table S4. of Functional classification of rice flanking sequence tagged genes using MapMan terms and global understanding on metabolic and regulatory pathways affected by dxr mutant having defects in light response

description: Functional classification of FST genes using MapMan terms and assignment of related FST lines. (XLSX 2505Â kb)
DOI: 10.17863/cam.43230
title: Data supporting 'Kelvin-Helmholtz billows above Richardson number 1/4'

description: This is the raw data used to generate the figures for the publication. The data was produced using Stratiflow (https://github.com/Jezz0r/Stratiflow) using the methods described in the paper.
DOI: 10.17863/cam.102763
title: Research Data supporting "Different electrophysiological profiles of genetically labelled dopaminergic neurons in the mouse midbrain and olfactory bulb"

description: Immunohistochemistry/confocal microscope images and electrophysiological single cell recordings. Data to support the publication "Different electrophysiological profiles in genetically labelled dopaminergic neurons in the mouse midbrain and olfactory bulb".
DOI: 10.6084/m9.figshare.c.3632564_d2.v1
title: Additional file 2: of Metagenomic analysis of the microbiota in the highly compartmented hindguts of six wood- or soil-feeding higher termites

description: Supplemental tables. Microsoft Excel file containing three sheets (Tables S1â  3) that contain the abundance and taxonomic information of iTag, COG, and protein-coding genes. (XLSX 3094 kb)
DOI: 10.17863/cam.7140
title: Ovarian tissue infiltrating lymphocytes (James et al)

description: Data set as described in James et al
DOI: 10.17863/cam.38856
title: Research data supporting "Role of fracture toughness in impact-abrasion wear"

description: Two new low alloyed steels were developed with different fracture toughness values but at similar level of hardness with same composition and microstructural phase. The steels were subjected to impact-abrasion wear test. This work examines specifically the additional role of toughness during impact-abrasion wear, using a newly developed high toughness steel. Microstructural characterisation of the damaged samples revealed that better toughness helps resist both impact and abrasion damage.
DOI: 10.6084/m9.figshare.c.3632642_d1.v1
title: Additional file 8: Table S8. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

description: The number of bacterial-like toxins identified in O. polyrhachis-furcata compared with other entomopathogenic fungi. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3632651_d1.v1
title: Additional file 5: Table S5. of Metazoan parasite communities: support for the biological invasion of Barbus barbus and its hybridization with the endemic Barbus meridionalis

description: Metazoan parasite communities in Barbus spp. populations. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.c.3632642_d2.v1
title: Additional file 2: Table S2. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

description: The blast results for the protein-coding genes of O. polyrhachis-furcata against PHI database. (XLS 385 kb)
DOI: 10.6084/m9.figshare.c.3632657_d1.v1
title: Additional file 1 of Superpixel-based segmentation of muscle fibers in multi-channel microscopy

description: The MATLAB and C code, and the data files used in this project. (ZIP 9346 kb)
DOI: 10.17863/cam.24362
title: Data related to the publication: "High-Speed Data Transmission over Flexible Multimode Polymer Waveguides Under Flexure"

description: Experimental data related to the IEEE Photonics Technology Letters publication entitled: "High-Speed Data Transmission over Flexible Multimode Polymer Waveguides Under Flexure"
DOI: 10.5281/zenodo.14509902
title: Interactive and unimodal relationships between plant biomass, abiotic factors, and plant diversity in global grasslands

description: The R file CodeGrasslandBiomass contains all R code necessary to reproduce all results of the manuscript “Interactive and unimodal relationships between plant biomass, abiotic factors, and plant diversity in global grasslands” based on the data in the csv file DataGB.
DOI: 10.6084/m9.figshare.c.3632672_d2.v1
title: Additional file 3: of Phylogeography reveals an ancient cryptic radiation in East-Asian tree frogs (Hyla japonica group) and complex relationships between continental and island lineages

description: List of H. japonica occurrences used in the distribution models (XLSX 35 kb)
DOI: 10.6084/m9.figshare.c.3632642_d9.v1
title: Additional file 3: Table S3. of Insights from the genome of Ophiocordyceps polyrhachis-furcata to pathogenicity and host specificity in insect fungi

description: The number of subtilisins, trypsins, and aspartyl proteases identified in O. polyrhachis-furcata compared with nineteen other fungi. (XLSX 14 kb)
DOI: 10.17863/cam.84150
title: Data for 'Self-Assembled Liposomes Enhance Electron Transfer for Efficient Photocatalytic CO2 Reduction'

description: Main - contains UV-vis, electrochemistry, cryogenic TEM, photocatalysis, product quantification, time-resolved and steady-state emission spectroscopy, transient absorption spectroscopy, UV-vis-NIR and Resonance Raman spectroelectrochemistry and image data related to main text sorted by respective figure. SI Data - contains all synthesis details (including 1H and 13C NMR, MS, microanalysis, FT-IR), liposome preparation details, electrochemistry, cryogenic TEM, photocatalysis, ime-resolved and steady-state emission spectroscopy, transient absorption spectroscopy, UV-vis-NIR and Resonance Raman spectroelectrochemistry, DFT calculated Raman spectra and structures and image data related to the Supplementary Information sorted by respective figure.
DOI: 10.6084/m9.figshare.c.3632678_d1.v1
title: Additional file 2: Figure S1. of A retrospective paired study: efficacy and toxicity of nimotuzumab versus cisplatin concurrent with radiotherapy in nasopharyngeal carcinoma

description: Overall survival of stage II patients who received h-R3/RT or CDDP/RT. Figure S2. Overall survival of patients aged more than 60Â years old who received h-R3/RT or CDDP/RT. Figure S3. Overall survival in stage III and IV patients with h-R3/RT and CDDP/RT. (ZIP 12 kb)
DOI: 10.6084/m9.figshare.c.3632678_d2.v1
title: Additional file 1: Table S1. of A retrospective paired study: efficacy and toxicity of nimotuzumab versus cisplatin concurrent with radiotherapy in nasopharyngeal carcinoma

description: Prognostic factors for overall survival (Univariate) (N = 104). Table S2. Prognostic factors for overall survival (multivariable) (N = 104). Table S3. Toxicities in stage III and IV patients with h-R3/RT and CDDP/RT (N = 78). Table S4. Assignment expressions for factors in the table of patients’ characteristics. Table S5. Patients’ compliance (104 cases). Table S6. Neoadjuvant chemotherapy was recommended by NCCN guidelines of Head and Neck Cancer. Table S7. General information for all 302 patients of CDDP/RT and h-R3/RT group. Table S8. Prognostic factors for Overall Survival of all 302 patients (Univariate). Table S9. Prognostic factors for Overall Survival of all 302 patients (Multivariable). (ZIP 437 kb)
DOI: 10.6084/m9.figshare.c.3632690_d2.v1
title: Additional file 5: Table S6. of Comparative genomic analysis of toxin-negative strains of Clostridium difficile from humans and animals with symptoms of gastrointestinal disease

description: Sheet 1 = Comparative BLASTp analysis of 4 genomes, Sheet 2 = Alignment of scaffold 11.1 of genome P29 against C. difficile CD630 genome. (XLSX 682 kb)
DOI: 10.17863/cam.104278
title: Research data supporting "A classical density functional theory for solvation across length scales"

description: This dataset contains the research data supporting the manuscript "A classical density functional theory for solvation across length scales". It contains all simulation inputs and data and plotting scripts supporting the findings of the study. Please see the readme files contained within each folder for more details.
DOI: 10.17863/cam.32767
title: Data supporting publication "Reusable Immobilized Iron(II) Nanoparticle Precatalysts for Ligand-Free Kumada Coupling"

description: Electron microscopy data (SEM and TEM images) of Fe-based precatalysts developed in Japan for ligand-free Kumada coupling chemistry.
DOI: 10.6084/m9.figshare.c.3632747_d3.v1
title: Additional file 5 of Gene Ontology synonym generation rules lead to increased performance in biomedical concept recognition

description: The list of novel synonyms generated by this method. (TXT 129024 kb)
DOI: 10.6084/m9.figshare.c.3632744_d3.v1
title: Additional file 5: of Seqinspector: position-based navigation through the ChIP-seq data landscape to identify gene expression regulators

description: Five example sets of genes used for comparison of seqinspector to other tools. (XLS 33 kb)
DOI: 10.17863/cam.111672
title: Research data supporting "Predictive control of pore architecture in ice-templated scaffolds via heat flux density modulation"

description: Quantitative and visual data of the porous structure of ice-templated collagen scaffolds produced under different conditions characterised by X-ray microtomography. Quantitative data of the pore size, degree of anisotropy and percolation diameter were acquired using CTAn (Bruker). Visual data were aquired using NRecon (Bruker) and CTVox (Bruker).
DOI: 10.6084/m9.figshare.c.3632762_d1.v1
title: Additional file 1: Table S1. of Bottom-up GGM algorithm for constructing multilayered hierarchical gene regulatory networks that govern biological pathways or processes

description: The output of ML-hGRN operating over lignocellulosic pathway built with the bottom-up GGM algorithm. Table S2. The output of regulatory layer over lignocellulosic pathway identified by ARACNE algorithm. Table S3. The ML-hGRN operating over human pluripotency renewal pathway built with the bottom-up GGM algorithm. Table S4. The output of regulatory layer over human stem cell renewal pathway identified by ARACNE algorithm. Table S5. Comparison of bottom-up GGM algorithm with ARANCE using yeast synthetic data. (XLSX 232 kb)
DOI: 10.6084/m9.figshare.c.3632744_d4.v1
title: Additional file 4: of Seqinspector: position-based navigation through the ChIP-seq data landscape to identify gene expression regulators

description: List of genes regulated in ruptured intracranial aneurysm. (XLS 25 kb)
DOI: 10.17863/cam.46318
title: Gaussian Log files for "A density functional theory study on the kinetics of seven-member ring formation in polyaromatic hydrocarbons"

description: This dataset consists of a ZIP folder containing the Gaussian 16 .log files generated for the publication "A density functional theory study on the kinetics of seven-member ring formation in polyaromatic hydrocarbons". Each .log file contains the result of a geometry optimization performed using Gaussian 16 (Gaussian.com) on the molecules and transition states studied in the manuscript. The input required to perform each calculation is found at the beginning of each log file, with the methodology described fully in the manuscript. The name of each .log file follows the nomenclature in the manuscript. The first capital letter identifies the reactant PAH, followed by S for species or TS for transition states. The number identifies how far along the reaction pathway the molecule is, and the final lower case letter identifies which reaction pathway the molecule belongs to.
DOI: 10.6084/m9.figshare.c.3632744_d5.v1
title: Additional file 1: of Seqinspector: position-based navigation through the ChIP-seq data landscape to identify gene expression regulators

description: List of genes upregulated by dexamethason. (XLS 6 kb)
DOI: 10.6084/m9.figshare.c.3632798_d1.v1
title: Additional file 1: Table S1. of Transcriptome wide analyses reveal a sustained cellular stress response in the gill tissue of Trematomus bernacchii after acclimation to multiple stressors

description: GO over representation analysis: This analysis table contains the raw data for the identification of GO terms over-represented in the 7d multi-stressor up-regulated, 7d multi-stressor down-regulated, 28d multi-stressor up-regulated, 28 multi-stressor down-regulated, 56 multi-stressor up-regulated, and 56 multi-stressor down-regulated subgroups. The table provides the GO-ID, GO Term, and number of terms found if over-represented in the subgroup (a blank entry indicates a lack of significance for that GO term). The total number of each GO terms found in the reference transcriptome is also included. (XLSX 21Â kb)
DOI: 10.15468/dl.jzhjhq
title: Occurrence Download

description: A dataset containing 5624 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coleus scutellarioides (L.) Benth."
 ]
}

 The dataset includes 5624 records from 294 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037881-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3632798_d7.v1
title: Additional file 2: Table S2. of Transcriptome wide analyses reveal a sustained cellular stress response in the gill tissue of Trematomus bernacchii after acclimation to multiple stressors

description: Carbohydrate metabolic process: This table provides all differentially expressed genes exceeding the confidence threshold (FDR ≤ 0.05) that are associated with the GO Term carbohydrate metabolic process (GO:0005975) at 7d, 28d and 56d (n = 4). The table includes the gene sequence name from the reference transcriptome, the BLAST result description, the sequence length, the number of BLAST hits to that gene sequence, the minimum e-value of the BLAST hits, the mean similarity, the # of GO terms associated with that sequence, the list of those GO terms, the Enzyme Codes associated with that sequence, InterproScan results associated with that sequence, the log2 adjusted fold change in expression, the log2 counts per million (CPM) of the reads mapped to that sequence, and the p-value and FDR reflecting the confidence in the displayed differential expression of that gene. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.c.3632798_d8.v1
title: Additional file 9: Table S9. of Transcriptome wide analyses reveal a sustained cellular stress response in the gill tissue of Trematomus bernacchii after acclimation to multiple stressors

description: Homeostatic process: This table provides all differentially expressed genes exceeding the confidence threshold (FDR ≤ 0.05) that are associated with the GO Term homeostatic process (GO:0042592) at 7d, 28d and 56d (n = 4). The table includes the gene sequence name from the reference transcriptome, the BLAST result description, the sequence length, the number of BLAST hits to that gene sequence, the minimum e-value of the BLAST hits, the mean similarity, the # of GO terms associated with that sequence, the list of those GO terms, the Enzyme Codes associated with that sequence, InterproScan results associated with that sequence, the log2 adjusted fold change in expression, the log2 counts per million (CPM) of the reads mapped to that sequence, and the p-value and FDR reflecting the confidence in the displayed differential expression of that gene. (XLSX 15 kb)