cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.16410645
title: GeoMedNet

description: # CESEN-GPARS: Interpretable Deep Learning for Medical Image Classification

## 🧠 Overview

**CESEN-GPARS** is an interpretable deep learning framework for medical image classification. It is designed to extract non-linear features and preserve structural consistency across complex high-dimensional data. This framework introduces two key components:

- **CESEN**: Curvature-Enhanced Signal Encoding Network- **GPARS**: Geometric Profile-Aligned Regularization Strategy

Together, they provide curvature-aware representation and geometry-aligned optimization for robust and explainable classification in medical imaging.

## 🔍 Key Features

- 💡 **Curvature-guided Feature Extraction**: Enhances local geometry using directional curvatures and angular modulation.- 🧩 **Geometric Profile Alignment**: Encourages global structural consistency via optimization-based surface fitting.- 🧠 **Interpretability-Preserving**: Maintains semantic structure and enhances visualization potential for medical diagnosis.- 📈 **Superior Generalization**: Outperforms state-of-the-art on ImageNet, Caltech-256, Oxford Flowers, and DTD datasets.

## 🧱 Architecture

The framework consists of:- A backbone encoder with curvature-enhanced modules (CESEN)- A geometry-aware loss function (GPARS)- Classification head with semantic alignment

📌 *For details, refer to Figures and diagrams on pages 5–8 of the paper.*

## 📦 Project Structure
DOI: 10.15468/dl.mjqcbx
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cribroheros diquis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038713-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.83r5c3
title: Occurrence Download

description: A dataset containing 616 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Citrus aurantium",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 616 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038715-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zxpat8
title: Occurrence Download

description: A dataset containing 4800 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((17.193226261657937 49.40088613139194, 17.192369736992173 49.30609511516247, 17.34340956611234 49.30280875075336, 17.343265708283287 49.398039245632745, 17.193226261657937 49.40088613139194))"
 ]
}

 The dataset includes 4800 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038714-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8jxm5v
title: Occurrence Download

description: A dataset containing 1642 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Centaurea stoebe",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1642 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038716-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v5hxr2
title: Occurrence Download

description: A dataset containing 266000 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Glycine max, Triticum aestivum, Oryza sativa, Hordeum vulgare, Vigna radiata, Ulmus pumila, Sorghum bicolor, Prunus persica, Cucumis melo, Castanea mollissima, Diospyros kaki, Phaseolus vulgaris, Vigna unguiculata, Zea mays, Prunus armeniaca, Sesamum indicum, Raphanus sativus, Vigna angularis, Setaria italica, Pisum sativum, Medicago sativa, Brassica rapa glabra, Citrullus lanatus, Pseudocydonia sinensis, Ziziphus jujuba, Juglans regia, Litchi chinensis, Cucurbita moschata, Avena sativa, Cucumis sativus, Cucurbita pepo, Helianthus annuus, Vigna unguiculata sesquipedalis, Panicum miliaceum, Vernicia montana, Prunus mume, Vicia faba, Cannabis sativa, Capsicum annuum, Citrus maxima, Elymus pseudocaninus, Solanum lycopersicum, Spinacia oleracea, Arachis hypogaea, Benincasa hispida, Lactuca sativa, Allium cepa, Solanum melongena, Agropyron cristatum, Lablab purpureus, Pyrus ussuriensis, Crataegus pinnatifida, Lagenaria siceraria, Daucus carota, Diospyros lotus, Pyrus calleryana, Vitis vinifera, Citrus sinensis, Colocasia esculenta, Brassica juncea, Citrus reticulata, Castanea henryi, Pinus bungeana, Beta vulgaris, Fagopyrum lineare, Gossypium arboreum, Agropyron sibiricum, Callistephus chinensis, Davidia involucrata, Rhododendron crinigerum, Astragalus melilotoides, Prunus tomentosa, Camellia sinensis, Juglans mandshurica, Meconopsis integrifolia, Prunus salicina, Viburnum betulifolium, Apium graveolens, Pistacia chinensis, Prunus davidiana, Calamagrostis epigejos, Gleditsia sinensis, Hibiscus cannabinus, Hordeum vulgare coeleste, Poa sphondylodes, Avena nuda, Malus sylvestris, Phyllostachys nidularia, Pinus armandii, Triticum turgidum, Triticum turgidum durum, Atalantia buxifolia, Berberis wilsoniae, Cucurbita maxima, Brassica oleracea, Fagopyrum esculentum, Vernicia fordii, Vigna unguiculata cylindrica, Actinidia chinensis)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is United States of America",
 "Year 2000-2024"
 ]
}

 The dataset includes 266000 records from 255 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038698-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6rqdtj
title: Occurrence Download

description: A dataset containing 4906 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anthus hodgsoni",
 "MediaType is Image"
 ]
}

 The dataset includes 4906 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038718-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gyp4jt
title: Occurrence Download

description: A dataset containing 11597 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Centaurea stoebe",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11597 records from 98 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038717-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/qew-9vr-5vk
title: Astragalus suberosus subsp. haarbachii (Spruner) V.A.Matthews

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.15468/dl.bj3cvw
title: Occurrence Download

description: A dataset containing 387014 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Robinia pseudoacacia L."
 ]
}

 The dataset includes 387014 records from 3108 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113330-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4eqd5j
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tinamiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((0 -60,30 -60,30 -30,0 -30,0 -60))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001213-251009101135966/datasets/export for details.
DOI: 10.5517/cc3z7z8
title: CCDC 118450: Experimental Crystal Structure Determination

description: Related Article: Ling Tong, H.Lau, D.M.Ho, R.A.Pascal Junior|1998|J.Am.Chem.Soc.|120|6000|doi:10.1021/ja980322r
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3z80b
title: CCDC 118451: Experimental Crystal Structure Determination

description: Related Article: Ling Tong, H.Lau, D.M.Ho, R.A.Pascal Junior|1998|J.Am.Chem.Soc.|120|6000|doi:10.1021/ja980322r
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3mglr
title: CCDC 108084: Experimental Crystal Structure Determination

description: Related Article: O.M. Yaghi, H. Li, T.L. Groy|1997|Z.Kristallogr.-New Cryst.Struct.|212|453|doi:10.1524/ncrs.1997.212.jg.453
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3phdn
title: CCDC 110031: Experimental Crystal Structure Determination

description: Related Article: K. Peters, E.-M. Peters, H.G. von Schnering, U. Burkhardt, V. Jager|1997|Z.Kristallogr.-New Cryst.Struct.|212|429|doi:10.1524/ncrs.1997.212.jg.429
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3mgsy
title: CCDC 108090: Experimental Crystal Structure Determination

description: Related Article: S. Pakhomova, J. Ondracek, J. Hodacova, I. Stibor|1997|Z.Kristallogr.-New Cryst.Struct.|212|461|doi:10.1524/ncrs.1997.212.1.461
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3mh28
title: CCDC 108099: Experimental Crystal Structure Determination

description: Related Article: R. Kempe, G. Hillebrand, A. Spannenberg|1997|Z.Kristallogr.-New Cryst.Struct.|212|490|doi:10.1524/ncrs.1997.212.1.490
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3cl23
title: CCDC 100504: Experimental Crystal Structure Determination

description: Related Article: C.A.Dullaghan, X.Zhang, D.Walther, G.B.Carpenter, D.A.Sweigart, Qingjin Meng|1997|Organometallics|16|5604|doi:10.1021/om970728x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3db5z
title: CCDC 101220: Experimental Crystal Structure Determination

description: Related Article: M.Kurmoo, M.Bonamico, C.Bellitto, V.Fares, F.Federici, P.Guionneau, L.Ducasse, H.Kitagawa, P.Day|1998|Adv.Mater.|10|545|doi:10.1002/(SICI)1521-4095(199805)10:7<545::AID-ADMA545>3.0.CO;2-M
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3yj9v
title: CCDC 117747: Experimental Crystal Structure Determination

description: Related Article: D.Trauner, S.Porth, T.Opatz, J.W.Bats, G.Giester, J.Mulzer|1998|Synthesis|1998|653|doi:10.1055/s-1998-5927
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3yjbw
title: CCDC 117748: Experimental Crystal Structure Determination

description: Related Article: D.Trauner, S.Porth, T.Opatz, J.W.Bats, G.Giester, J.Mulzer|1998|Synthesis|1998|653|doi:10.1055/s-1998-5927
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3yjcx
title: CCDC 117749: Experimental Crystal Structure Determination

description: Related Article: D.Trauner, S.Porth, T.Opatz, J.W.Bats, G.Giester, J.Mulzer|1998|Synthesis|1998|653|doi:10.1055/s-1998-5927
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3yjdy
title: CCDC 117750: Experimental Crystal Structure Determination

description: Related Article: D.Trauner, S.Porth, T.Opatz, J.W.Bats, G.Giester, J.Mulzer|1998|Synthesis|1998|653|doi:10.1055/s-1998-5927
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3yjfz
title: CCDC 117751: Experimental Crystal Structure Determination

description: Related Article: D.Trauner, S.Porth, T.Opatz, J.W.Bats, G.Giester, J.Mulzer|1998|Synthesis|1998|653|doi:10.1055/s-1998-5927
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3yjg0
title: CCDC 117752: Experimental Crystal Structure Determination

description: Related Article: D.Trauner, S.Porth, T.Opatz, J.W.Bats, G.Giester, J.Mulzer|1998|Synthesis|1998|653|doi:10.1055/s-1998-5927
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3yjh1
title: CCDC 117753: Experimental Crystal Structure Determination

description: Related Article: D.Trauner, S.Porth, T.Opatz, J.W.Bats, G.Giester, J.Mulzer|1998|Synthesis|1998|653|doi:10.1055/s-1998-5927
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3yjj2
title: CCDC 117754: Experimental Crystal Structure Determination

description: Related Article: D.Trauner, S.Porth, T.Opatz, J.W.Bats, G.Giester, J.Mulzer|1998|Synthesis|1998|653|doi:10.1055/s-1998-5927
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3yjk3
title: CCDC 117755: Experimental Crystal Structure Determination

description: Related Article: D.Trauner, S.Porth, T.Opatz, J.W.Bats, G.Giester, J.Mulzer|1998|Synthesis|1998|653|doi:10.1055/s-1998-5927
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3yjl4
title: CCDC 117756: Experimental Crystal Structure Determination

description: Related Article: D.Trauner, S.Porth, T.Opatz, J.W.Bats, G.Giester, J.Mulzer|1998|Synthesis|1998|653|doi:10.1055/s-1998-5927
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3d8rh
title: CCDC 101176: Experimental Crystal Structure Determination

description: Related Article: H.-J.Knolker, P.G.Jones, G.Wanzl|1998|Synlett|1998|613|doi:10.1055/s-1998-1727
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3cym0
title: CCDC 100862: Experimental Crystal Structure Determination

description: Related Article: B.Crousse, L.-H.Xu, G.Bernardinelli, E.P.Kundig|1998|Synlett|1998|658|doi:10.1055/s-1998-1722
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3crdl
title: CCDC 100669: Experimental Crystal Structure Determination

description: Related Article: J.C.Morris, L.N.Mander, D.C.R.Hockless|1998|Synthesis|1998|455|doi:10.1055/s-1998-5932
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3kzby
title: CCDC 106650: Experimental Crystal Structure Determination

description: Related Article: P.Laurent, L.Hennig, K.Burger, W.Hiller, M.Neumayer|1998|Synthesis|1998|905|doi:10.1055/s-1998-4491
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.6377dp
title: Occurrence Download

description: A dataset containing 112 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Clarkia virgata"
 ]
}

 The dataset includes 112 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008819-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc3dhgf
title: CCDC 101384: Experimental Crystal Structure Determination

description: Related Article: S.Bosshammer, H.-J.Gais|1998|Synthesis|1998|919|doi:10.1055/s-1998-2071
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3cmz1
title: CCDC 100563: Experimental Crystal Structure Determination

description: Related Article: S.Hunig, R.Bau, M.Kemmer, H.Meixner, T.Metzenthin, K.Peters, K.Sinzger, J.Gulbis|1998|Eur.J.Org.Chem.|1998|335|doi:10.1002/(SICI)1099-0690(199802)1998:2<335::AID-EJOC335>3.3.CO;2-1
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.4zbesp
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carabus arboreus arboreus",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 17 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0195483-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.