cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1998611.08fu
title: SH1998611.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1319502.08fu
title: SH1319502.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1319503.08fu
title: SH1319503.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1319504.08fu
title: SH1319504.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1998612.08fu
title: SH1998612.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1998613.08fu
title: SH1998613.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1998614.08fu
title: SH1998614.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.22600274.v1
title: Additional file 4 of Integrated transcriptome and proteome revealed that the declined expression of cell cycle-related genes associated with follicular atresia in geese

description: Additional file 4: Table S1. Summary of transcriptome sequencing quality.
DOI: 10.6084/m9.figshare.14211675.v1
title: Additional file 3 of Unveiling the long non-coding RNA profile of porcine reproductive and respiratory syndrome virus-infected porcine alveolar macrophages

description: Additional file 3.
DOI: 10.6084/m9.figshare.22600304
title: Additional file 14 of Integrated transcriptome and proteome revealed that the declined expression of cell cycle-related genes associated with follicular atresia in geese

description: Additional file 14: Table S11. The expressions of mRNAs and proteins that corresponds to each other in the goose follicles.
DOI: 10.6084/m9.figshare.14211675
title: Additional file 3 of Unveiling the long non-coding RNA profile of porcine reproductive and respiratory syndrome virus-infected porcine alveolar macrophages

description: Additional file 3.
DOI: 10.6084/m9.figshare.14211678
title: Additional file 4 of Unveiling the long non-coding RNA profile of porcine reproductive and respiratory syndrome virus-infected porcine alveolar macrophages

description: Additional file 4.
DOI: 10.6084/m9.figshare.22602859
title: Additional file 3 of Identification of candidate genes and pathways associated with juvenile idiopathic arthritis by integrative transcriptome-wide association studies and mRNA expression profiles

description: Additional file 3:. CGSEA results.
DOI: 10.6084/m9.figshare.22602884.v1
title: Additional file 6 of Morphometric analysis of the size-adjusted linear dimensions of the skull landmarks revealed craniofacial dysmorphology in Mid1-cKO mice

description: Additional file 6: Table S2. Asymmetric Regression Residualsextracted from MorphoJ for allometric correction.
DOI: 10.6084/m9.figshare.22602893
title: Additional file 9 of Morphometric analysis of the size-adjusted linear dimensions of the skull landmarks revealed craniofacial dysmorphology in Mid1-cKO mice

description: Additional file 9: Table S5. CS-normalized Inter-landmark distancesof Mid1-cKO mice used in EDMA analysis.
DOI: 10.6084/m9.figshare.22602866.v1
title: Additional file 1 of Morphometric analysis of the size-adjusted linear dimensions of the skull landmarks revealed craniofacial dysmorphology in Mid1-cKO mice

description: Additional file 1: Fig S1. 3D wireframe plot of one Mid1 nullmutant mouse, showing the aberrant defining features in red/blue lines(identified larger or smaller in every individual Mid1-cKO mouse, with &gt;5%mean difference and P&lt;0.001) and the strongly differing features in greylines (over 5% mean difference and P&lt;0.001, but not always identified inevery individual Mid1-cKO mouse).
DOI: 10.6084/m9.figshare.22602881
title: Additional file 5 of Morphometric analysis of the size-adjusted linear dimensions of the skull landmarks revealed craniofacial dysmorphology in Mid1-cKO mice

description: Additional file 5: Table S1. Symmetric Regression Residualsextracted from MorphoJ for allometric correction.
DOI: 10.6084/m9.figshare.22602902
title: Additional file 12 of Morphometric analysis of the size-adjusted linear dimensions of the skull landmarks revealed craniofacial dysmorphology in Mid1-cKO mice

description: Additional file 12: Table S8. Raw data of landmark coordinatescollected on the skull surfaces reconstructed from microCT scan images using 3DSlicer.
DOI: 10.6084/m9.figshare.22602902.v1
title: Additional file 12 of Morphometric analysis of the size-adjusted linear dimensions of the skull landmarks revealed craniofacial dysmorphology in Mid1-cKO mice

description: Additional file 12: Table S8. Raw data of landmark coordinatescollected on the skull surfaces reconstructed from microCT scan images using 3DSlicer.
DOI: 10.6084/m9.figshare.22602890.v1
title: Additional file 8 of Morphometric analysis of the size-adjusted linear dimensions of the skull landmarks revealed craniofacial dysmorphology in Mid1-cKO mice

description: Additional file 8: Table S4. RDs calculated using size-adjustedlandmark coordinates of symmetric Regression Residuals for Wnt1-Cre transgenicmice.
DOI: 10.6084/m9.figshare.22602890
title: Additional file 8 of Morphometric analysis of the size-adjusted linear dimensions of the skull landmarks revealed craniofacial dysmorphology in Mid1-cKO mice

description: Additional file 8: Table S4. RDs calculated using size-adjustedlandmark coordinates of symmetric Regression Residuals for Wnt1-Cre transgenicmice.
DOI: 10.6084/m9.figshare.22602872.v1
title: Additional file 3 of Morphometric analysis of the size-adjusted linear dimensions of the skull landmarks revealed craniofacial dysmorphology in Mid1-cKO mice

description: Additional file 3: Fig S3. 3D wireframe plot on one Wnt1-Cre transgenic mouse (EDMA).
DOI: 10.6084/m9.figshare.22602893.v1
title: Additional file 9 of Morphometric analysis of the size-adjusted linear dimensions of the skull landmarks revealed craniofacial dysmorphology in Mid1-cKO mice

description: Additional file 9: Table S5. CS-normalized Inter-landmark distancesof Mid1-cKO mice used in EDMA analysis.
DOI: 10.6084/m9.figshare.22600289.v1
title: Additional file 9 of Integrated transcriptome and proteome revealed that the declined expression of cell cycle-related genes associated with follicular atresia in geese

description: Additional file 9: Table S6. GO enrichment of differentially expressed genes between normal and atretic follicles (molecular_function).
DOI: 10.6084/m9.figshare.22602884
title: Additional file 6 of Morphometric analysis of the size-adjusted linear dimensions of the skull landmarks revealed craniofacial dysmorphology in Mid1-cKO mice

description: Additional file 6: Table S2. Asymmetric Regression Residualsextracted from MorphoJ for allometric correction.
DOI: 10.6084/m9.figshare.22600295.v1
title: Additional file 11 of Integrated transcriptome and proteome revealed that the declined expression of cell cycle-related genes associated with follicular atresia in geese

description: Additional file 11: Table S8. The expression of all proteins in the goose follicles.
DOI: 10.6084/m9.figshare.6350048.v1
title: Additional file 3: of Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits

description: Appendix 1. Summary files from MEME-ChIP and FIMO. Summary file from MEME-ChIP program shows that 4 out of 82 CTCF binding motif profiles are validated in public databases of known transcription factor binding motifs, and the rest are novel CTCF binding motifs. Summary file from FIMO program shows the matched CTCF binding motifs in the bovine genome. The S2_Appendix/fimo.html and S2_Table are linked by the “motif number”, “motif width” and “best possible match” columns. (ZIP 108 kb)
DOI: 10.34740/kaggle/dsv/7580861
title: 2021 World Population (updated daily)
DOI: 10.6084/m9.figshare.6874298
title: Additional file 3: of Bacterial microbiota protect an invasive bark beetle from a pine defensive compound

description: Gene IDs of KEGG pathways in map01120. (HTML 848 kb)
DOI: 10.6084/m9.figshare.6350009.v1
title: Additional file 1: of Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits

description: Table S1. Summary of genomic conversion of mammalian TADs to the bovine genome. This table summarises results of converting mammalian TAD coordinates to the bovine genome in each step. Query: the input to liftOver in every step of genomic conversion. Target: the output in every step of genomic conversion. NA: not applicable. Gap: the genomic interval that are not marked as TAD in the data. (XLSX 495 kb)
DOI: 10.6084/m9.figshare.6350009.v2
title: Additional file 1: of Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits

description: Table S1. Summary of genomic conversion of mammalian TADs to the bovine genome. This table summarises results of converting mammalian TAD coordinates to the bovine genome in each step. Query: the input to liftOver in every step of genomic conversion. Target: the output in every step of genomic conversion. NA: not applicable. Gap: the genomic interval that are not marked as TAD in the data. (XLSX 22 kb)
DOI: 10.6084/m9.figshare.6874298.v1
title: Additional file 3: of Bacterial microbiota protect an invasive bark beetle from a pine defensive compound

description: Gene IDs of KEGG pathways in map01120. (HTML 848 kb)
DOI: 10.6084/m9.figshare.6350009
title: Additional file 1: of Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits

description: Table S1. Summary of genomic conversion of mammalian TADs to the bovine genome. This table summarises results of converting mammalian TAD coordinates to the bovine genome in each step. Query: the input to liftOver in every step of genomic conversion. Target: the output in every step of genomic conversion. NA: not applicable. Gap: the genomic interval that are not marked as TAD in the data. (XLSX 22 kb)
DOI: 10.6084/m9.figshare.6350069
title: Additional file 4: of Putative bovine topological association domains and CTCF binding motifs can reduce the search space for causative regulatory variants of complex traits

description: Table S3. Rank and fold change of enrichment of biological hallmarks at putative bovine TAD boundaries. This table shows the level of enrichment of each biological hallmark at putative bovine TAD boundaries. The level of enrichment for each biological signal is measured by the number of base pairs that a biological signal overlapping with the TAD boundary. Presented are two types of TAD boundaries for each TAD set, differed by whether a boundary is considered present if two neighbouring putative bovine TADs overlap each other by 1 bp. “&lt; 0.0001” denotes the degree of overlap between the biological hallmark and TAD boundaries larger than all permuted cases. (A) The degrees of enrichment of all biological signals at the boundary of each TAD set are shown. (B) The degrees of enrichment of each pattern of CTCF binding motifs at the boundary of each TAD set are shown. Each motif pattern has a unique motif number defined by the FIMO output. Each best possible match motif is manually compared with the MEME-ChIP to assess whether the matched motif is previously reported. (XLSX 54 kb)
DOI: 10.6084/m9.figshare.14738589.v1
title: Additional file 3 of Genome-wide identification and expression analysis of the bHLH transcription factor family and its response to abiotic stress in sorghum [Sorghum bicolor (L.) Moench]

description: Additional file 3 Table S3. Tandem duplication events of S. bicolor bHLH genes.
DOI: 10.6084/m9.figshare.22600286.v1
title: Additional file 8 of Integrated transcriptome and proteome revealed that the declined expression of cell cycle-related genes associated with follicular atresia in geese

description: Additional file 8: Table S5. The differentially expressed genes between normal and atretic follicles.
DOI: 10.6084/m9.figshare.14738592.v1
title: Additional file 4 of Genome-wide identification and expression analysis of the bHLH transcription factor family and its response to abiotic stress in sorghum [Sorghum bicolor (L.) Moench]

description: Additional file 4 Table S4. The 42 pairs of segmental duplications in S. bicolor bHLH genes.
DOI: 10.6084/m9.figshare.14738595
title: Additional file 5 of Genome-wide identification and expression analysis of the bHLH transcription factor family and its response to abiotic stress in sorghum [Sorghum bicolor (L.) Moench]

description: Additional file 5 Table S5. One-to-one orthologous genes relationships between S. bicolor and other plants.
DOI: 10.6084/m9.figshare.22600295
title: Additional file 11 of Integrated transcriptome and proteome revealed that the declined expression of cell cycle-related genes associated with follicular atresia in geese

description: Additional file 11: Table S8. The expression of all proteins in the goose follicles.
DOI: 10.6084/m9.figshare.14738586.v1
title: Additional file 2 of Genome-wide identification and expression analysis of the bHLH transcription factor family and its response to abiotic stress in sorghum [Sorghum bicolor (L.) Moench]

description: Additional file 2 Table S2. Analysis and distribution of the conserved motifs in S. bicolor bHLH proteins.
DOI: 10.6084/m9.figshare.14738595.v1
title: Additional file 5 of Genome-wide identification and expression analysis of the bHLH transcription factor family and its response to abiotic stress in sorghum [Sorghum bicolor (L.) Moench]

description: Additional file 5 Table S5. One-to-one orthologous genes relationships between S. bicolor and other plants.
DOI: 10.6084/m9.figshare.14738598
title: Additional file 6 of Genome-wide identification and expression analysis of the bHLH transcription factor family and its response to abiotic stress in sorghum [Sorghum bicolor (L.) Moench]

description: Additional file 6 Table S6. Primer sequences for qRT-PCR.
DOI: 10.26165/juelich-data/vgehrd/d12nz7
title: i09-150335.nxs

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DOI: 10.26165/juelich-data/vgehrd/egejqh
title: i09-118706.nxs

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DOI: 10.26165/juelich-data/vgehrd/v4x57a
title: GrR0_AziProfile(V).csv

description: :unav
DOI: 10.26165/juelich-data/vgehrd/hycapg
title: i09-150333.nxs

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DOI: 10.26165/juelich-data/vgehrd/lvcmhb
title: Igel_7503-7595_-4.9rotated_K30_EDC.hdf5

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DOI: 10.26165/juelich-data/vgehrd/fgw7xp
title: 13_SiC_Coffee(GrR0)_165eV_x=23_y=17.5_z=277.5_theta=128_t=7ms_size=170_550points_I=1.05A.nc

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DOI: 10.26165/juelich-data/vgehrd/vkrvmf
title: Igel_50_E=165eV_y=20_theta=135.nc

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DOI: 10.26165/juelich-data/vgehrd/xxs9ql
title: i09-150437_Coffee_K0_y550,5.hdf

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DOI: 10.26165/juelich-data/vgehrd/eiixx4
title: Igel_7503-7595_-34.9rotated_K0_EDC.hdf5

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DOI: 10.26165/juelich-data/vgehrd/h7grcd
title: i09-118704.nxs

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DOI: 10.26165/juelich-data/vgehrd/i4si41
title: i09-118709.nxs

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DOI: 10.26165/juelich-data/vgehrd/xwe9kl
title: i09-118705.nxs

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DOI: 10.26165/juelich-data/vgehrd/rlysii
title: 13_SiC_Coffee(GrR0)_165eV_x=23_y=17.5_z=277.5_theta=128_t=7ms_size=170_550points_I=1.05A_Corr_Full_02_Si(111)_Ceasar_165eV_x=21_y=20_z=277.5_theta=128_t=7ms_size=170_550points_I=1.05A_enzeert-2.png

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DOI: 10.26165/juelich-data/vgehrd/qgs1tj
title: Igel_7695-7854_bestQuality_rotated_Gamma-K0_EDC.hdf5

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DOI: 10.26165/juelich-data/vgehrd/n31jcs
title: 2018 Coffee-tBLG0032_recip59,30deg_GammaK30.ARPES-hdf

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DOI: 10.26165/juelich-data/vgehrd/mdpa4r
title: i09-150334.nxs

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DOI: 10.26165/juelich-data/vgehrd/sjxyag
title: i09-118701.nxs

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DOI: 10.26165/juelich-data/vgehrd/28nci2
title: i09-150336.nxs

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DOI: 10.26165/juelich-data/vgehrd/beqqup
title: i09-118710.nxs

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DOI: 10.26165/juelich-data/vgehrd/2kb0rh
title: 6_Lars_E=165eV_y=21_theta=136(inverted_linear 0-600).bmp

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DOI: 10.26165/juelich-data/vgehrd/nmymg8
title: i09-118702.nxs

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