cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8255897.v1
title: Dataset from Regional climate affects salmon lice dynamics, stage structure and management

description: Regional variation in climate can generate differences in population dynamics and stage structure. Where regional differences exist, the best approach to pest management may be region-specific. Salmon lice are a stage-structured marine copepod that parasitizes salmonids at aquaculture sites worldwide, and have fecundity, development and mortality rates that depend on temperature and salinity. We show that in Atlantic Canada and Norway, where the oceans are relatively cold, salmon lice abundance decreases during the winter months, but ultimately increases from year to year, while in Ireland and Chile, where the oceans are warmer, the population size grows monotonically without any seasonal declines. In colder regions, during the winter the stage structure is dominated by the adult stage, which is in contrast to warmer regions where all stages are abundant year round. These differences translate into region-specific recommendations for management: regions with slower population growth have lower critical stocking densities, and regions with cold winters have a seasonal dependence in the timing of follow-up chemotherapeutic treatments. Predictions of our salmon lice model agree with empirical data, and our approach provides a method to understand the effects of regional differences in climate on salmon lice dynamics and management.
DOI: 10.6084/m9.figshare.8255873
title: Selection for small body size favours contrasting sex-specific life histories, boldness and feeding in medaka, Oryzias latipes

description: Growth data for male and female medaka consist of length and age data from birth to maturation under 2 feeding regimes and from 2 lines selected for large or small size. <br><br>Behaviour data for male and female medaka consist of freezing and feeding behaviours under 3 different conditions (normal food, novel food and after a threat).<br>
DOI: 10.6084/m9.figshare.8255855
title: Twitter Publications Coordinates

description: Coordinates of tweets of users on different days. The Json file contains the date of publication, anonimized user id, and coordinates associated to the publication.
DOI: 10.25377/sussex.8255852
title: Data used in figures for paper: PicoTesla absolute field readings with a hybrid 3He/87Rb magnetometer

description: Data used in figures for an article in The European Physical Journal D (EPJ D) (2019) 73:150.<br>https://arxiv.org/abs/1903.01492<br><br>For descriptions of the figures, please refer to the text of the paper.<br><br>Data file is tab delimited, units as indicated for each column, y-error bars given as 3rd column for figs. 5, 6, and 8, x and y error bars given as 3rd and 4th column for fig. 7.<br><br>Abstract:We demonstrate the use of a hybrid 3He/87Rb magnetometer to measure absolute magnetic fields in the pT range. The measurements were undertaken by probing time-dependent 3He magnetisation using 87Rb zero-field magnetometers. Measurements were taken to demonstrate the use of the magnetometer in cancelling residual fields within a magnetic shield. It was shown that the absolute field could be reduced to the 10 pT level by using field readings from the magnetometer. Furthermore, the hybrid magnetometer was shown to be applicable for the reduction of gradient fields by optimising the effective 3He T2 time. This procedure represents a convenient and consistent way to provide a near zero magnetic field environment which can be potentially used as a base for generating desired magnetic field configurations for use in precision measurements.<br>
DOI: 10.6084/m9.figshare.8255855.v1
title: Twitter Publications Coordinates

description: Coordinates of tweets of users on different days. The Json file contains the date of publication, anonimized user id, and coordinates associated to the publication.
DOI: 10.6084/m9.figshare.8255873.v2
title: Selection for small body size favours contrasting sex-specific life histories, boldness and feeding in medaka, Oryzias latipes

description: Growth data for male and female medaka consist of length and age data from birth to maturation under 2 feeding regimes and from 2 lines selected for large or small size. <br><br>Behaviour data for male and female medaka consist of freezing and feeding behaviours under 3 different conditions (normal food, novel food and after a threat).<br>
DOI: 10.6084/m9.figshare.8255777
title: Supplementary Material for: Height Gain and Safety Outcomes in Growth Hormone-Treated Children with Idiopathic Short Stature: Experience from a Prospective Observational Study

description: <b><i>Background/Objectives:</i></b> Growth hormone (GH) treatment of idiopathic short stature (ISS) received US Food and Drug Administration approval in 2003. We assessed height gain and safety in 2,450 children with ISS treated with GH in US clinical practice. <b><i>Methods:</i></b> Short-term height gain, near-adult height (NAH), and safety outcomes were investigated using Genetics and Neuroendocrinology of Short Stature International Study data. <b><i>Results:</i></b> Compared to children with isolated idiopathic GH deficiency (IGHD), those with ISS were shorter at baseline but had similar age and GH dose. Mean ± SD height SD score (SDS) increase was similar for ISS and IGHD, with 0.6 ± 0.3 (first), 0.4 ± 0.3 (second), 0.3 ± 0.3 (third), and 0.1 ± 0.3 (fourth year) for ISS. Girls with ISS (27% of subjects) were younger and shorter than boys but had similar height gain over time. At NAH in the ISS group (<i>n</i> = 467), mean ± SD age, GH duration, and height SDS were 17.3 ± 2.3 years, 4.6 ± 2.7 years, and –1.2 ± 0.9, respectively. Height gain from baseline was 1.1 ± 1.0 SDS and was greater for boys than girls (1.2 ± 1.0 vs. 0.9 ± 0.9), but boys were treated longer (5.1 ± 2.8 vs. 3.6 ± 2.5 years). Adverse events were reported for 24% with ISS versus 20% with IGHD – most were common childhood conditions or previously reported in GH-treated patients. <b><i>Conclusions:</i></b> GH-treated children with ISS achieved substantial height gain, similar to patients with IGHD. Fewer GH-treated girls were enrolled than boys, but with similar height SDS gain over time. No ISS-specific safety issues were identified. Thus, GH treatment of ISS appears to have a safety/effectiveness profile similar to that of IGHD.
DOI: 10.6084/m9.figshare.8255873.v1
title: Selection for small body size favours contrasting sex-specific life histories, boldness and feeding in medaka, Oryzias latipes

description: Growth data for male and female medaka consist of length and age data from birth to maturation under 2 feeding regimes and from 2 lines selected for large or small size. <br><br>Behaviour data for male and female medaka consist of freezing and feeding behaviours under 3 different conditions (normal food, novel food and after a threat).<br>
DOI: 10.25377/sussex.8255852.v1
title: Data used in figures for paper: PicoTesla absolute field readings with a hybrid 3He/87Rb magnetometer

description: Data used in figures for an article in The European Physical Journal D (EPJ D) (2019) 73:150.<br>https://arxiv.org/abs/1903.01492<br><br>For descriptions of the figures, please refer to the text of the paper.<br><br>Data file is tab delimited, units as indicated for each column, y-error bars given as 3rd column for figs. 5, 6, and 8, x and y error bars given as 3rd and 4th column for fig. 7.<br><br>Abstract:We demonstrate the use of a hybrid 3He/87Rb magnetometer to measure absolute magnetic fields in the pT range. The measurements were undertaken by probing time-dependent 3He magnetisation using 87Rb zero-field magnetometers. Measurements were taken to demonstrate the use of the magnetometer in cancelling residual fields within a magnetic shield. It was shown that the absolute field could be reduced to the 10 pT level by using field readings from the magnetometer. Furthermore, the hybrid magnetometer was shown to be applicable for the reduction of gradient fields by optimising the effective 3He T2 time. This procedure represents a convenient and consistent way to provide a near zero magnetic field environment which can be potentially used as a base for generating desired magnetic field configurations for use in precision measurements.<br>
DOI: 10.6084/m9.figshare.8255777.v1
title: Supplementary Material for: Height Gain and Safety Outcomes in Growth Hormone-Treated Children with Idiopathic Short Stature: Experience from a Prospective Observational Study

description: <b><i>Background/Objectives:</i></b> Growth hormone (GH) treatment of idiopathic short stature (ISS) received US Food and Drug Administration approval in 2003. We assessed height gain and safety in 2,450 children with ISS treated with GH in US clinical practice. <b><i>Methods:</i></b> Short-term height gain, near-adult height (NAH), and safety outcomes were investigated using Genetics and Neuroendocrinology of Short Stature International Study data. <b><i>Results:</i></b> Compared to children with isolated idiopathic GH deficiency (IGHD), those with ISS were shorter at baseline but had similar age and GH dose. Mean ± SD height SD score (SDS) increase was similar for ISS and IGHD, with 0.6 ± 0.3 (first), 0.4 ± 0.3 (second), 0.3 ± 0.3 (third), and 0.1 ± 0.3 (fourth year) for ISS. Girls with ISS (27% of subjects) were younger and shorter than boys but had similar height gain over time. At NAH in the ISS group (<i>n</i> = 467), mean ± SD age, GH duration, and height SDS were 17.3 ± 2.3 years, 4.6 ± 2.7 years, and –1.2 ± 0.9, respectively. Height gain from baseline was 1.1 ± 1.0 SDS and was greater for boys than girls (1.2 ± 1.0 vs. 0.9 ± 0.9), but boys were treated longer (5.1 ± 2.8 vs. 3.6 ± 2.5 years). Adverse events were reported for 24% with ISS versus 20% with IGHD – most were common childhood conditions or previously reported in GH-treated patients. <b><i>Conclusions:</i></b> GH-treated children with ISS achieved substantial height gain, similar to patients with IGHD. Fewer GH-treated girls were enrolled than boys, but with similar height SDS gain over time. No ISS-specific safety issues were identified. Thus, GH treatment of ISS appears to have a safety/effectiveness profile similar to that of IGHD.
DOI: 10.6084/m9.figshare.8255768
title: Supplementary Material for: Different Responses to a High-Fat Diet in IL-6 Conditional Knockout Mice Driven by Constitutive GFAP-Cre and Synapsin 1-Cre Expression

description: <b><i>Background/Aims:</i></b> Interleukin-6 (IL-6) is a major cytokine controlling body weight and metabolism, at least in part through actions in the central nervous system (CNS) from local sources. <b><i>Methods:</i></b> We herewith report results obtained in conditional IL-6 KO mice for brain cells (<i>Il6</i><sup><i>ΔGfap</i></sup> and <i>Il6</i><sup><i>ΔSyn</i></sup>). <b><i>Results:</i></b> The reporter RiboTag mouse line demonstrated specific astrocytic expression of GFAP-dependent Cre in the hypothalamus but not in other brain areas, whereas that of synapsin 1-dependent Cre was specific for neurons. Feeding a high-fat diet (HFD) or a control diet showed that <i>Il6</i><sup><i>ΔGfap</i></sup> and <i>Il6</i><sup><i>ΔSyn</i></sup> mice were more prone and resistant, respectively, to HFD-induced obesity. Energy intake was not altered in HFD experiments, but it was reduced in <i>Il6</i><sup><i>ΔSyn</i></sup> male mice following a 24-h fast. HFD increased circulating insulin, leptin, and cholesterol levels, decreased triglycerides, and caused impaired responses to the insulin and glucose tolerance tests. In <i>Il6</i><sup><i>ΔGfap</i></sup> mice, the only significant difference observed was an increase in insulin levels of females, whereas in <i>Il6</i><sup><i>ΔSyn</i></sup> mice the effects of HFD were decreased. Hypothalamic <i>Agrp</i> expression was significantly decreased by HFD, further decreased in <i>Il6</i><sup><i>ΔGfap</i></sup>, and increased in <i>Il6</i><sup><i>ΔSyn</i></sup> female mice. Hypothalamic <i>Il-6</i> mRNA levels were not decreased in <i>Il6</i><sup><i>ΔSyn</i></sup> mice and even increased in <i>Il6</i><sup><i>ΔGfap</i></sup><sup></sup>male mice. Microarray analysis of hypothalamic RNA showed that female <i>Il6</i><sup><i>ΔGfap</i></sup> mice had increased interferon-related pathways and affected processes in behavior, modulation of chemical synaptic transmission, learning, and memory. <b><i>Conclusion:</i></b> The present results demonstrate that brain production of IL-6 regulates body weight in the context of caloric excess and that the cellular source is critical.
DOI: 10.6084/m9.figshare.8255768.v1
title: Supplementary Material for: Different Responses to a High-Fat Diet in IL-6 Conditional Knockout Mice Driven by Constitutive GFAP-Cre and Synapsin 1-Cre Expression

description: <b><i>Background/Aims:</i></b> Interleukin-6 (IL-6) is a major cytokine controlling body weight and metabolism, at least in part through actions in the central nervous system (CNS) from local sources. <b><i>Methods:</i></b> We herewith report results obtained in conditional IL-6 KO mice for brain cells (<i>Il6</i><sup><i>ΔGfap</i></sup> and <i>Il6</i><sup><i>ΔSyn</i></sup>). <b><i>Results:</i></b> The reporter RiboTag mouse line demonstrated specific astrocytic expression of GFAP-dependent Cre in the hypothalamus but not in other brain areas, whereas that of synapsin 1-dependent Cre was specific for neurons. Feeding a high-fat diet (HFD) or a control diet showed that <i>Il6</i><sup><i>ΔGfap</i></sup> and <i>Il6</i><sup><i>ΔSyn</i></sup> mice were more prone and resistant, respectively, to HFD-induced obesity. Energy intake was not altered in HFD experiments, but it was reduced in <i>Il6</i><sup><i>ΔSyn</i></sup> male mice following a 24-h fast. HFD increased circulating insulin, leptin, and cholesterol levels, decreased triglycerides, and caused impaired responses to the insulin and glucose tolerance tests. In <i>Il6</i><sup><i>ΔGfap</i></sup> mice, the only significant difference observed was an increase in insulin levels of females, whereas in <i>Il6</i><sup><i>ΔSyn</i></sup> mice the effects of HFD were decreased. Hypothalamic <i>Agrp</i> expression was significantly decreased by HFD, further decreased in <i>Il6</i><sup><i>ΔGfap</i></sup>, and increased in <i>Il6</i><sup><i>ΔSyn</i></sup> female mice. Hypothalamic <i>Il-6</i> mRNA levels were not decreased in <i>Il6</i><sup><i>ΔSyn</i></sup> mice and even increased in <i>Il6</i><sup><i>ΔGfap</i></sup><sup></sup>male mice. Microarray analysis of hypothalamic RNA showed that female <i>Il6</i><sup><i>ΔGfap</i></sup> mice had increased interferon-related pathways and affected processes in behavior, modulation of chemical synaptic transmission, learning, and memory. <b><i>Conclusion:</i></b> The present results demonstrate that brain production of IL-6 regulates body weight in the context of caloric excess and that the cellular source is critical.
DOI: 10.6084/m9.figshare.8253128
title: A genome-wide screening of DNA methylation in decidua samples measured by HumanMethylation450 array

description: In the present study, we used the Illumina Infinium HumanMethylation450 array platform to conduct a genome-wide screening of DNA methylation in decidua samples from the products of conception of women with recurrent miscarriage (RM) and to identify novel methylation variable positions (MVPs) and differentially methylated regions (DMRs). Furthermore, to gain insight into the molecular regulatory mechanisms of RM, gene ontology (GO) and pathway enrichment analyses were used to explore the potential diagnostic biomarkers and possible regulatory targets
DOI: 10.6084/m9.figshare.8253113
title: antigenicity classification of conformational epitopes

description: Data Citation 12---Antigenicity classification of conformational epitopes
DOI: 10.6084/m9.figshare.8253128.v2
title: A genome-wide screening of DNA methylation in decidua samples measured by HumanMethylation450 array

description: In the present study, we used the Illumina Infinium HumanMethylation450 array platform to conduct a genome-wide screening of DNA methylation in decidua samples from the products of conception of women with recurrent miscarriage (RM) and to identify novel methylation variable positions (MVPs) and differentially methylated regions (DMRs). Furthermore, to gain insight into the molecular regulatory mechanisms of RM, gene ontology (GO) and pathway enrichment analyses were used to explore the potential diagnostic biomarkers and possible regulatory targets
DOI: 10.6084/m9.figshare.8253089
title: antigenicity classification of conformational epitopes

description: Data Citation 12---Antigenicity classification of conformational epitopes
DOI: 10.6084/m9.figshare.8253089.v1
title: antigenicity classification of conformational epitopes

description: Data Citation 12---Antigenicity classification of conformational epitopes
DOI: 10.6084/m9.figshare.8253128.v1
title: 杜晶_GN00166-RSA分组-Report.7z

description: Illumina Infinium HumanMethylation450 array
DOI: 10.6084/m9.figshare.8253062
title: Financial risk indicators

description: 金融风险指标的数据来自WDI，EPS，新浪财经和Guo Yan Net。 <br>
DOI: 10.6084/m9.figshare.8253062.v1
title: Adjacency Matrix (Country Dimension).xlsx

description: The data in this paper come from public databases such as World Bank, Sina Finance and Economics, National Research Network and so on.
DOI: 10.6084/m9.figshare.8253062.v2
title: raw data

description: The data in this paper come from public databases such as World Bank, Sina Finance and Economics, National Research Network and so on.
DOI: 10.6084/m9.figshare.8252825
title: Additional file 1: of Transcriptome analysis of bolting in A. tequilana reveals roles for florigen, MADS, fructans and gibberellins

description: Stages of bolting and examples of SAM tissue in A. tequilana. (ZIP 549 kb)
DOI: 10.6084/m9.figshare.8252825.v1
title: Additional file 1: of Transcriptome analysis of bolting in A. tequilana reveals roles for florigen, MADS, fructans and gibberellins

description: Stages of bolting and examples of SAM tissue in A. tequilana. (ZIP 549 kb)
DOI: 10.6084/m9.figshare.8252792
title: Additional file 3 of A novel system for introducing precisely-controlled, unanticipated gait perturbations for the study of stumble recovery

description: A script containing the essential functions to the operation of the Predictive Targeting Algorithm. Intended as a guide for similar systems. (C 31 kb)
DOI: 10.6084/m9.figshare.8252792.v1
title: Additional file 3 of A novel system for introducing precisely-controlled, unanticipated gait perturbations for the study of stumble recovery

description: A script containing the essential functions to the operation of the Predictive Targeting Algorithm. Intended as a guide for similar systems. (C 31 kb)
DOI: 10.6084/m9.figshare.8252783
title: Additional file 2 of A novel system for introducing precisely-controlled, unanticipated gait perturbations for the study of stumble recovery

description: CAD files detailing the design of the Obstacle Delivery Apparatus in full (ramp, block, and magnet). McMaster-Carr part numbers are included in the properties for applicable parts. (ZIP 37,588 kb)
DOI: 10.6084/m9.figshare.8252777
title: MOESM2 of Using remotely sensed and climate data to predict the current and potential future geographic distribution of a bird at multiple scales: the case of Agelastes meleagrides, a western African forest endemic

description: Additional file 2. Climatic data model calibration output using kuenm R Package.
DOI: 10.6084/m9.figshare.8252783.v1
title: Additional file 2 of A novel system for introducing precisely-controlled, unanticipated gait perturbations for the study of stumble recovery

description: CAD files detailing the design of the Obstacle Delivery Apparatus in full (ramp, block, and magnet). McMaster-Carr part numbers are included in the properties for applicable parts. (ZIP 37,588 kb)
DOI: 10.6084/m9.figshare.8252774
title: Additional file 1 of A novel system for introducing precisely-controlled, unanticipated gait perturbations for the study of stumble recovery

description: A compilation video of a single subject recovering from a range of variously timed perturbations throughout swing phase. The subject is walking at 1.1 m/s. Elevating, lowering, and delayed lowering strategies are demonstrated. (ZIP 16,403 kb)
DOI: 10.6084/m9.figshare.8252774.v1
title: Additional file 1 of A novel system for introducing precisely-controlled, unanticipated gait perturbations for the study of stumble recovery

description: A compilation video of a single subject recovering from a range of variously timed perturbations throughout swing phase. The subject is walking at 1.1 m/s. Elevating, lowering, and delayed lowering strategies are demonstrated. (ZIP 16,403 kb)
DOI: 10.6084/m9.figshare.8252777.v1
title: MOESM2 of Using remotely sensed and climate data to predict the current and potential future geographic distribution of a bird at multiple scales: the case of Agelastes meleagrides, a western African forest endemic

description: Additional file 2. Climatic data model calibration output using kuenm R Package.
DOI: 10.6084/m9.figshare.8252747
title: Additional file 9: of Genomic erosion and extensive horizontal gene transfer in gut-associated Acetobacteraceae

description: File S1. Amino acid alignment used for Bayesian phylogenomic analysis. (FASTA 86 kb)
DOI: 10.6084/m9.figshare.8252750
title: MOESM1 of Prevalence and diversity of avian blood parasites in a resident northern passerine

description: Additional file 1: Table S1. A summary of the occupancy modeling approach for estimating probability of haemosporidian parasite infection and probability of detecting haemosporidian mtDNA in northwestern crows (Corvus caurinus) relative to temporal, spatial, and host characteristics. Models are ranked by Î AICc values. Table S2. AICc model-selection results for Plasmodium infection in northwestern crows (Corvus caurinus) relative to temporal, spatial, and host characteristics. Table S3. AICc model-selection results for Haemoproteus infection in northwestern crows (Corvus caurinus) relative to temporal, spatial, and host characteristics. Table S4. AICc model-selection results for Leucocytozoon infection in northwestern crows (Corvus caurinus) relative to temporal, spatial, and host characteristics.
DOI: 10.6084/m9.figshare.8252741
title: Additional file 4: of Digital dissection of the head of the rock dove (Columba livia) using contrast-enhanced computed tomography

description: A spreadsheet of the segmented structures, the extent of smoothing used, and final number of faces in the 3D pdf. (XLSX 42 kb)
DOI: 10.6084/m9.figshare.8252750.v1
title: MOESM1 of Prevalence and diversity of avian blood parasites in a resident northern passerine

description: Additional file 1: Table S1. A summary of the occupancy modeling approach for estimating probability of haemosporidian parasite infection and probability of detecting haemosporidian mtDNA in northwestern crows (Corvus caurinus) relative to temporal, spatial, and host characteristics. Models are ranked by Î AICc values. Table S2. AICc model-selection results for Plasmodium infection in northwestern crows (Corvus caurinus) relative to temporal, spatial, and host characteristics. Table S3. AICc model-selection results for Haemoproteus infection in northwestern crows (Corvus caurinus) relative to temporal, spatial, and host characteristics. Table S4. AICc model-selection results for Leucocytozoon infection in northwestern crows (Corvus caurinus) relative to temporal, spatial, and host characteristics.
DOI: 10.6084/m9.figshare.8252735
title: Additional file 3: of Digital dissection of the head of the rock dove (Columba livia) using contrast-enhanced computed tomography

description: Terminology used for the throat muscles. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.8252741.v1
title: Additional file 4: of Digital dissection of the head of the rock dove (Columba livia) using contrast-enhanced computed tomography

description: A spreadsheet of the segmented structures, the extent of smoothing used, and final number of faces in the 3D pdf. (XLSX 42 kb)