cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10876206
title: Data generated from calculations in "Gauge Field Dynamics in a Multilayer Kitaev Spin Liquid"

description: The Kitaev honeycomb model hosts a quantum spin liquid in its ground state, where the excitations are gapless Majorana fermions and static Z2 gauge fluxes called visons. We consider Kitaev models stacked on top of each other, weakly coupled by Heisenberg interaction linear in J⊥. This inter-layer coupling breaks the integrability of the model and makes the gauge fields dynamic. While single visons stay static in this model, an inter-layer pair of visons can hop with a hopping amplitude linear in J⊥, but remains confined to a single plane. An intra-layer vison-pair, in contrast, is constrained to move along the stacking direction only. Depending on the anisotropy of the Kitaev couplings Kx,Ky,Kz, the intra-layer vison pairs show completely different dynamical behaviours. While coherent intra-layer tunnelling is possible for sufficiently strong anisotropies, only incoherent processes are possible in the isotropic case. When a magnetic field opens a gap for Majorana fermions, one can identify two types of intra-layer vison pairs, one bosonic and one fermionic. Only the bosonic pair obtains a hopping rate linear in J⊥. We argue that our results can be used to identify leading instabilities of the Kitaev phase induced by the inter-layer coupling.
DOI: 10.5281/zenodo.10878261
title: Quick keys to the Bominae genera of South Africa (Araneae: Thomisidae)

description: In this paper, keys are provided to identify the genera Avelis Simon, 1895, Holopelus Simon, 1886, Parabomis,1901 and Thomisops Karsch, 1879 and their species in the field and from photographs. With their small and round bodies they resemble seeds and may easily be overlooked in the field. The latest information on their distribution and conservation status in South Africa is provided.
DOI: 10.5281/zenodo.10878262
title: Quick keys to the Bominae genera of South Africa (Araneae: Thomisidae)

description: In this paper, keys are provided to identify the genera Avelis Simon, 1895, Holopelus Simon, 1886, Parabomis,1901 and Thomisops Karsch, 1879 and their species in the field and from photographs. With their small and round bodies they resemble seeds and may easily be overlooked in the field. The latest information on their distribution and conservation status in South Africa is provided.
DOI: 10.34740/kaggle/dsv/7947496
title: COVID Vaccination in World (updated daily)
DOI: 10.14473/csda/8g0jdw/4dfxwz
title: Nesstar_NS_DataFile_0611.tab

description: Data
DOI: 10.14473/csda/8g0jdw/qythy8
title: OM_V0611.pdf

description: Ostatní materiály
DOI: 10.14473/csda/8g0jdw/zezzdh
title: K_V0611.pdf

description: Karty
DOI: 10.14473/csda/8g0jdw/ekozm4
title: D_V0611.pdf

description: Dotazník
DOI: 10.14473/csda/8g0jdw/glq2fq
title: TI_V0611.pdf

description: Technická informace
DOI: 10.14473/csda/8g0jdw/zgtho0
title: PR07_V0611.pdf

description: Veřejnost o odsunu a Benešových dekretech. Tisková zpráva CVVM.
DOI: 10.14473/csda/8g0jdw/zvyaaz
title: PR06_V0611.pdf

description: Veřejné mínění o Senátu. Tisková zpráva CVVM.
DOI: 10.14473/csda/8g0jdw/hyqhrp
title: PR08_V0611.pdf

description: Vztahy se Slovenskem. Tisková zpráva CVVM.
DOI: 10.14473/csda/8g0jdw/aji2gr
title: PR02_V0611.pdf

description: Jaké by měly být priority v populační politice? Tisková zpráva CVVM.
DOI: 10.14473/csda/8g0jdw/sppst6
title: PR05_V0611.pdf

description: Důvěra k ústavním institucím a spokojenost s politickou situací. Tisková zpráva CVVM.
DOI: 10.14473/csda/8g0jdw/pivc33
title: PR03_V0611.pdf

description: Svatby v české společnosti. Tisková zpráva CVVM.
DOI: 10.14473/csda/8g0jdw/srklet
title: PR09_V0611.pdf

description: Stranické preference a volební model v listopadu 2006. Tisková zpráva CVVM.
DOI: 10.14473/csda/8g0jdw/7kfzul
title: PR10_V0611.pdf

description: Občané a komunální volby. Tisková zpráva CVVM.
DOI: 10.14473/csda/8g0jdw/5sgq7p
title: PR04_V0611.pdf

description: Role mužů a žen. tisková zpráva CVVM.
DOI: 10.14473/csda/8g0jdw/msylrc
title: PR01_V0611.pdf

description: Sociální politika očima veřejnosti. Tisková zpráva CVVM.
DOI: 10.14473/csda/8g0jdw
title: Naše společnost 2006 - listopad

description: Kontinuální měsíční výzkum provedl výzkumný tým CVVM Sociologického ústavu AV ČR v rámci pravidelného měsíčního výzkumného projektu. Jsou při něm zjišťovány postoje a názory občanů. Výzkum provedl výzkumný tým CVVM Sociologického ústavu AV ČR v rámci výzkumu. "Naše společnost 2006". Sběr dat provedla tazatelská síť CVVM.
DOI: 10.5281/zenodo.6941530
title: Nematostella OA

description: Nematostella OA
DOI: 10.6084/m9.figshare.24625322.v1
title: The complete chloroplast genome of <i>Polygala subopposita</i>, an endemic milkwort in China

description: <i>Polygala subopposita</i> is an endemic milkwort species in China. In this study, we present the assembly of its chloroplast genome (plastome) for the first time. The total plastome size is 164,784 bp in length, consisting of a large single-copy (LSC) region of 83,235 bp, a small single-copy (SSC) region of 8,037 bp, and two inverted repeat (IR) regions of 36,756 bp that have expanded approximately 10 kb into the SSC region. A total of 111 unique genes were identified in the plastome, including 77 protein-coding, 30 tRNA, and four rRNA genes. Interestingly, the <i>trn</i>Q<sup>UUG</sup> gene was found to have two additional copies in the IRs, and the <i>clp</i>P gene lost its entire intron 2. Phylogenetic analysis suggests a close relationship between <i>P. subopposita</i> and <i>P. crotalarioides</i>. These findings provide valuable genomic resources for further research on the phylogenetic and evolutionary studies of Polygalaceae.
DOI: 10.6084/m9.figshare.24625322
title: The complete chloroplast genome of <i>Polygala subopposita</i>, an endemic milkwort in China

description: <i>Polygala subopposita</i> is an endemic milkwort species in China. In this study, we present the assembly of its chloroplast genome (plastome) for the first time. The total plastome size is 164,784 bp in length, consisting of a large single-copy (LSC) region of 83,235 bp, a small single-copy (SSC) region of 8,037 bp, and two inverted repeat (IR) regions of 36,756 bp that have expanded approximately 10 kb into the SSC region. A total of 111 unique genes were identified in the plastome, including 77 protein-coding, 30 tRNA, and four rRNA genes. Interestingly, the <i>trn</i>Q<sup>UUG</sup> gene was found to have two additional copies in the IRs, and the <i>clp</i>P gene lost its entire intron 2. Phylogenetic analysis suggests a close relationship between <i>P. subopposita</i> and <i>P. crotalarioides</i>. These findings provide valuable genomic resources for further research on the phylogenetic and evolutionary studies of Polygalaceae.
DOI: 10.6084/m9.figshare.24709418
title: The complete plastome of <i>Campsis radicans</i> (L.) Bureau 1864 and its phylogenetic analysis

description: <i>Campsis radicans</i> (L.) Bureau 1864, a species of Bignoniaceae, has a widespread paleotropical distribution and is utilized for horticultural and traditional Chinese medicinal purposes. Despite the plant’s significance, its genetic diversity must be better understood. In this study, we have successfully assembled and characterized the complete plastome of <i>C. radicans</i>, marking a significant advancement toward comprehending its genetic composition. The plastome is 153,630 bp long and harbors 130 genes, including 86 protein-coding genes, 36 tRNA genes, and eight rRNA genes. Our phylogenomic analysis of the representative species of Bignoniaceae indicated that <i>C. radicans</i> formed a monophyletic sister clade of <i>Campsis</i> with <i>C. grandiflora</i>. These findings are crucial for conserving and utilizing this important plant species. They also highlight the potential for future research into the evolution and preservation of <i>C</i>. <i>radicans</i>, which could be advantageous in pharmaceutical applications.
DOI: 10.6084/m9.figshare.24709418.v1
title: The complete plastome of <i>Campsis radicans</i> (L.) Bureau 1864 and its phylogenetic analysis

description: <i>Campsis radicans</i> (L.) Bureau 1864, a species of Bignoniaceae, has a widespread paleotropical distribution and is utilized for horticultural and traditional Chinese medicinal purposes. Despite the plant’s significance, its genetic diversity must be better understood. In this study, we have successfully assembled and characterized the complete plastome of <i>C. radicans</i>, marking a significant advancement toward comprehending its genetic composition. The plastome is 153,630 bp long and harbors 130 genes, including 86 protein-coding genes, 36 tRNA genes, and eight rRNA genes. Our phylogenomic analysis of the representative species of Bignoniaceae indicated that <i>C. radicans</i> formed a monophyletic sister clade of <i>Campsis</i> with <i>C. grandiflora</i>. These findings are crucial for conserving and utilizing this important plant species. They also highlight the potential for future research into the evolution and preservation of <i>C</i>. <i>radicans</i>, which could be advantageous in pharmaceutical applications.
DOI: 10.6084/m9.figshare.24581656
title: Characterization of the complete mitochondrial genome of a forensically important beetle, <i>Ptomascopus plagiatus</i> (Coleoptera: staphylinidae: silphinae)

description: Ptomascopus plagiatus (Ménétriés, 1854) is a forensically important silphid species. In this study, we report on the mitochondrial genome of <i>P. plagiatus</i>. The complete mitochondrial genome of <i>P. plagiatus</i> is 17556 bp and contains 22 transfer RNA genes, 13 protein-coding genes (PCGs), two ribosomal RNA genes, and a 2953 bp noncoding region. The nucleotide composition of <i>P. plagiatus</i> is biased toward A and T (A + T: 77.46%). Phylogenetic analysis based on mitogenomic data supports that <i>P. plagiatus</i> is closely related to (<i>Nicrophorus nepalensis</i> Hope, 1831 + <i>Nicrophorus vespilloides</i> Herbst, 1783) within the subfamily Silphinae.
DOI: 10.6084/m9.figshare.24581656.v1
title: Characterization of the complete mitochondrial genome of a forensically important beetle, <i>Ptomascopus plagiatus</i> (Coleoptera: staphylinidae: silphinae)

description: Ptomascopus plagiatus (Ménétriés, 1854) is a forensically important silphid species. In this study, we report on the mitochondrial genome of <i>P. plagiatus</i>. The complete mitochondrial genome of <i>P. plagiatus</i> is 17556 bp and contains 22 transfer RNA genes, 13 protein-coding genes (PCGs), two ribosomal RNA genes, and a 2953 bp noncoding region. The nucleotide composition of <i>P. plagiatus</i> is biased toward A and T (A + T: 77.46%). Phylogenetic analysis based on mitogenomic data supports that <i>P. plagiatus</i> is closely related to (<i>Nicrophorus nepalensis</i> Hope, 1831 + <i>Nicrophorus vespilloides</i> Herbst, 1783) within the subfamily Silphinae.
DOI: 10.6084/m9.figshare.24709462
title: The complete plastome sequence of <i>Heuchera micrantha</i> Douglas ex Lindl. (Saxifragaceae), an ornamental plant

description: The perennial herb <i>Heuchera micrantha</i> (Saxifragaceae) is a popular ornamental plant. However, the plastome sequence of <i>H. micrantha</i> has not been reported yet. Here, we assembled the complete plastome of <i>H. micrantha</i> using Illumina high-throughput pair-end sequencing. The plastome is a circular DNA molecule of 155,469 bp, comprising a pair of inverted repeat (IR, 25,654 bp) regions, a small single copy (SSC, 18,050 bp) region, and a large single copy (LSC, 86,111 bp) region. It encodes 129 genes, of which 84 are protein-coding genes, 37 are transfer RNAs, and eight are rRNAs. The total GC content is 37.8%. Phylogenetic analysis shows that <i>H. micrantha</i>, together with three other <i>Heuchera</i> species is clustered with <i>Tiarella cordifolia</i>. This complete plastome is beneficial for future genetic research on the <i>Heuchera</i> group.
DOI: 10.6084/m9.figshare.24709462.v1
title: The complete plastome sequence of <i>Heuchera micrantha</i> Douglas ex Lindl. (Saxifragaceae), an ornamental plant

description: The perennial herb <i>Heuchera micrantha</i> (Saxifragaceae) is a popular ornamental plant. However, the plastome sequence of <i>H. micrantha</i> has not been reported yet. Here, we assembled the complete plastome of <i>H. micrantha</i> using Illumina high-throughput pair-end sequencing. The plastome is a circular DNA molecule of 155,469 bp, comprising a pair of inverted repeat (IR, 25,654 bp) regions, a small single copy (SSC, 18,050 bp) region, and a large single copy (LSC, 86,111 bp) region. It encodes 129 genes, of which 84 are protein-coding genes, 37 are transfer RNAs, and eight are rRNAs. The total GC content is 37.8%. Phylogenetic analysis shows that <i>H. micrantha</i>, together with three other <i>Heuchera</i> species is clustered with <i>Tiarella cordifolia</i>. This complete plastome is beneficial for future genetic research on the <i>Heuchera</i> group.
DOI: 10.6084/m9.figshare.24465666
title: The complete chloroplast genome of a halophyte glasswort <i>Salicornia europaea</i>

description: <i>Salicornia europaea</i> is a salt-tolerant eudicot species in the Amaranthaceae family that is widely distributed in coastal wetlands and other saline-alkali lands. In this study, the complete chloroplast genome of <i>S. europaea</i> was determined using Illumina paired-end sequencing technology. The genome was 153,163 bp in length with 132 genes, including 87 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The genome displayed a quadripartite structure consisting of a small single-copy (SSC) region of 18,953 bp, a large single-copy (LSC) region of 84,566 bp, and two inverted repeats (IRs) of 49,644 bp, respectively. The phylogenetic analysis indicated that <i>Salicornia europaea</i> exhibited the closest relationship with <i>S. bigelovii</i>. This study contributes to the pool of salt-tolerant gene species and serves as a valuable reference for further research on <i>Salicornia</i>.
DOI: 10.6084/m9.figshare.24465666.v1
title: The complete chloroplast genome of a halophyte glasswort <i>Salicornia europaea</i>

description: <i>Salicornia europaea</i> is a salt-tolerant eudicot species in the Amaranthaceae family that is widely distributed in coastal wetlands and other saline-alkali lands. In this study, the complete chloroplast genome of <i>S. europaea</i> was determined using Illumina paired-end sequencing technology. The genome was 153,163 bp in length with 132 genes, including 87 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The genome displayed a quadripartite structure consisting of a small single-copy (SSC) region of 18,953 bp, a large single-copy (LSC) region of 84,566 bp, and two inverted repeats (IRs) of 49,644 bp, respectively. The phylogenetic analysis indicated that <i>Salicornia europaea</i> exhibited the closest relationship with <i>S. bigelovii</i>. This study contributes to the pool of salt-tolerant gene species and serves as a valuable reference for further research on <i>Salicornia</i>.
DOI: 10.5281/zenodo.10878367
title: input files for "Determination of Protein Structural Ensembles by Hybrid-Resolution SAXS Restrained Molecular Dynamics".

description: input files for "Determination of Protein Structural Ensembles by Hybrid-Resolution SAXS Restrained Molecular Dynamics", cf. plumed-nest
DOI: 10.5281/zenodo.4154620
title: input files for "Determination of Protein Structural Ensembles by Hybrid-Resolution SAXS Restrained Molecular Dynamics".

description: input files for "Determination of Protein Structural Ensembles by Hybrid-Resolution SAXS Restrained Molecular Dynamics", cf. plumed-nest
DOI: 10.5281/zenodo.4154621
title: input files for "Determination of Protein Structural Ensembles by Hybrid-Resolution SAXS Restrained Molecular Dynamics".

description: input files for "Determination of Protein Structural Ensembles by Hybrid-Resolution SAXS Restrained Molecular Dynamics", cf. plumed-nest
DOI: 10.6084/m9.figshare.24591511
title: The complete chloroplast genome of <i>Ranunculus ternatus</i> (Ranunculaceae)

description: <i>Ranunculus ternatus</i> Thunb. 1784 is a plant with important medicinal values. Here we report its chloroplast genome. This chloroplast genome was 156,003 bp in length with a GC content of 37.86%. It is composed of a large single copy (LSC) of 85,397 bp and a small single copy (SSC) of 19,856 bp, which are separated by a pair of inverted repeats (IR) of 25,375 bp each. The chloroplast genome contained 110 unique genes, including 77 protein-coding genes, 4 rRNA genes, and 29 tRNA genes. Phylogenetic analysis indicated that <i>R. ternatus</i> was closely related to <i>R. cassubicifolius</i>. This chloroplast genome not only enriches the genome information of <i>Ranunculus</i> but also will be useful for the evolution study of the family Ranunculaceae.
DOI: 10.6084/m9.figshare.24591511.v1
title: The complete chloroplast genome of <i>Ranunculus ternatus</i> (Ranunculaceae)

description: <i>Ranunculus ternatus</i> Thunb. 1784 is a plant with important medicinal values. Here we report its chloroplast genome. This chloroplast genome was 156,003 bp in length with a GC content of 37.86%. It is composed of a large single copy (LSC) of 85,397 bp and a small single copy (SSC) of 19,856 bp, which are separated by a pair of inverted repeats (IR) of 25,375 bp each. The chloroplast genome contained 110 unique genes, including 77 protein-coding genes, 4 rRNA genes, and 29 tRNA genes. Phylogenetic analysis indicated that <i>R. ternatus</i> was closely related to <i>R. cassubicifolius</i>. This chloroplast genome not only enriches the genome information of <i>Ranunculus</i> but also will be useful for the evolution study of the family Ranunculaceae.
DOI: 10.6084/m9.figshare.25480132
title: Characteristics and phylogenetic analysis of the complete chloroplast genome of <i>Rubus chingii</i> Hu 1925 from the family Rosaceae

description: <i>Rubus chingii</i> Hu 1925 is an important medicinal vine shrub in the Rosaceae family, widely distributed in China and Japan. In this study, the complete chloroplast genome of <i>R. chingii</i> was sequenced and identified. The chloroplast genome was 155,563 bp in size with a total GC content of 37.06%. Two 25,749-bp inverted repeat (IRA and IRB) regions divided the genome as four sections, with the remainder forming a large single-copy (LSC, 85,322 bp) and a small single-copy (SSC, 18,743 bp) regions. This genome contained a total of 131 genes, of which 86 were protein-coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic analysis showed that <i>R. chingii</i>, along with several other <i>R. longisepalus</i>, <i>R. tsangii</i>, <i>R. hirsutus</i>, <i>R. taiwanicola</i>, <i>R. rubroangustifolius</i>, and <i>R. glandulosopunctatus</i>, formed the monophylic group. Interestingly, the chloroplast genome structure we reported was different from the previously reported structure and provided richer phylogenetic analysis information in the <i>Rubus</i> genus compared to previous studies. The genome information reported in this paper will provide some useful information for further investigation on the evolution of the family Rosaceae.
DOI: 10.6084/m9.figshare.25480132.v1
title: Characteristics and phylogenetic analysis of the complete chloroplast genome of <i>Rubus chingii</i> Hu 1925 from the family Rosaceae

description: <i>Rubus chingii</i> Hu 1925 is an important medicinal vine shrub in the Rosaceae family, widely distributed in China and Japan. In this study, the complete chloroplast genome of <i>R. chingii</i> was sequenced and identified. The chloroplast genome was 155,563 bp in size with a total GC content of 37.06%. Two 25,749-bp inverted repeat (IRA and IRB) regions divided the genome as four sections, with the remainder forming a large single-copy (LSC, 85,322 bp) and a small single-copy (SSC, 18,743 bp) regions. This genome contained a total of 131 genes, of which 86 were protein-coding genes, 37 tRNA genes, and eight rRNA genes. The phylogenetic analysis showed that <i>R. chingii</i>, along with several other <i>R. longisepalus</i>, <i>R. tsangii</i>, <i>R. hirsutus</i>, <i>R. taiwanicola</i>, <i>R. rubroangustifolius</i>, and <i>R. glandulosopunctatus</i>, formed the monophylic group. Interestingly, the chloroplast genome structure we reported was different from the previously reported structure and provided richer phylogenetic analysis information in the <i>Rubus</i> genus compared to previous studies. The genome information reported in this paper will provide some useful information for further investigation on the evolution of the family Rosaceae.
DOI: 10.6084/m9.figshare.24591442.v1
title: Complete mitochondrial genome sequence of historical olive (<i>Olea europaea</i> Linnaeus 1753 subsp. <i>europaea</i>) cultivar Mehras in Jordan

description: The complete mitochondrial genome of the olive cultivar Mehras was determined using high-throughput sequencing technology. It consisted of 710,808 base pairs and comprised 70 genes, including 44 protein-coding genes, 23 tRNA genes, and three rRNA genes, with a GC content of 44.7%. Significant single nucleotide polymorphisms (SNPs) and insertions/deletions (InDels) were detected throughout the mitogenome. Phylogenetic analysis was conducted using other genotypes, including five olive cultivars, three related species, and <i>Olea exasperata</i> as an out-group. The analysis revealed that the olive cultivar Mehras shares an ancient common ancestor with the Frantoio cultivar from Italy and the Manzanilla cultivar from Spain, which confirms previous findings based on plastome sequencing.
DOI: 10.6084/m9.figshare.24591442
title: Complete mitochondrial genome sequence of historical olive (<i>Olea europaea</i> Linnaeus 1753 subsp. <i>europaea</i>) cultivar Mehras in Jordan

description: The complete mitochondrial genome of the olive cultivar Mehras was determined using high-throughput sequencing technology. It consisted of 710,808 base pairs and comprised 70 genes, including 44 protein-coding genes, 23 tRNA genes, and three rRNA genes, with a GC content of 44.7%. Significant single nucleotide polymorphisms (SNPs) and insertions/deletions (InDels) were detected throughout the mitogenome. Phylogenetic analysis was conducted using other genotypes, including five olive cultivars, three related species, and <i>Olea exasperata</i> as an out-group. The analysis revealed that the olive cultivar Mehras shares an ancient common ancestor with the Frantoio cultivar from Italy and the Manzanilla cultivar from Spain, which confirms previous findings based on plastome sequencing.
DOI: 10.6084/m9.figshare.24465712
title: The complete chloroplast genome of <i>Ocimum basilicum</i> L. var. <i>basilicum</i> (Lamiaceae) and its phylogenetic analysis

description: <i>Ocimum basilicum</i> L. var. <i>basilicum</i> (Sweet Basil) is an aromatic herb belonging to the family Lamiaceae and is known for its medicinal uses. It is commonly used in traditional medicine for its therapeutic value, including anti-allergic, anti-inflammatory, antioxidant, antitumor, and antimicrobial properties. In this study, we generated the complete chloroplast genome sequence of <i>O. basilicum</i> var. <i>basilicum</i> using Illumina paired-end sequencing data. The chloroplast genome was 152,407 bp in length, containing a large single-copy (LSC) region of 83,409 bp and a small single-copy region (SSC) of 17,604 bp, separated by a pair of inverted repeats (IRs) of 25,697 bp. The genome contained 134 genes, including 89 protein-coding, 37 tRNA, and eight rRNA genes. Nine genes had one intron, two genes had two introns, and others did not have any intron. Overall GC content of the chloroplast genome was 38%, while that of LSC, SSC, and IR regions was 35.9%, 31.6%, and 43.1%, respectively. Phylogenetic analysis of the chloroplast genomes revealed that <i>O. basilicum</i> var. <i>basilicum</i> was closely related to <i>Ocimum basilicum</i> from the <i>Ocimum</i> species.