cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27155904.v1
title: <b>Data set of Moderating Effects of Perceived IT Infrastructure on E-government Adoption and Perceived Quality Service Delivery</b>

description: The dataset contains responses from public sector employees in Somalia, focused on examining the moderating effects of perceived IT infrastructure on e-government adoption and its impact on perceived quality service delivery. The data includes responses to a structured questionnaire with items designed to measure key variables such as e-government adoption, perceived quality of service delivery, top management support, staff satisfaction, and perceived IT infrastructure.
DOI: 10.6084/m9.figshare.12095229.v1
title: High-resolution orthophoto map and digital surface models of the largest Argentine Islands (the Antarctic) from unmanned aerial vehicle photogrammetry

description: This study presents the first high-resolution orthophoto maps and digital surface models (DSMs) of the largest Argentine Islands, West Antarctica. Aerial surveys with small unmanned aerial vehicle (UAV) were performed in Austral summer, 2018, taking 10,041 aerial photographs. Accuracy requirements were ensured using ground control points (GCPs). A resolution of 3.4 and 6.8 cm/px of orthomosaics and DSMs is reached on average, and the RMS reprojection error is 0.22 m on average. We report the morphometric parameters of surveyed islands and discuss issues related to accuracy and the usage of UAVs in polar conditions. This study demonstrates that small and low cost UAVs can be successfully used in harsh polar conditions to obtain accurate orthomosaics and DSMs of mainly glaciated terrain. We provide all generated materials in full resolution available in a scientific data repository that could be used for the monitoring of ice cap changes, vegetation cover, and wildlife populations.
DOI: 10.6084/m9.figshare.5853270
title: Additional file 7 of Can linear transportation infrastructure verges constitute a habitat and/or a corridor for insects in temperate landscapes? A systematic review

description: Additional file 7. Data included in the meta-analyses: study case identifier (Case.ID), study identifier (ID_doc), short reference, susceptibility to bias, randomisation, true spatial replication, type of literature, study duration, country, ILT, habitat contrast, insect order, insect groups, trophic level, habitat specialization, conservation status, response variable, data extracted for treatment (t) and control (c) from studies (N: sample sizes, MEAN: mean, VAR: measure of variability, BOXPLOT first/third quartile: first and third quartiles), Stat. test: identity, direction, effect and pvalue for treatment/control comparison given within studies, Ncorr: total sample size corrected for non-independent cases, effect size (d) and variance (var).
DOI: 10.6084/m9.figshare.5683666.v1
title: Arctic hydroclimate synthesis

description: This file contains the data used into the Arctic 2K review paper: Linderholm et al. (2017). The file contains metadata and individual records for each proxy series.<br><br>Linderholm, H. W., Nicolle, M., Francus, P., Gajewski, K., Helama, S., Korhola, A., Solomina, O., Yu, Z., Zhang, P., D'Andrea, W. J., Debret, M., Divine, D., Gunnarson, B. E., Loader, N. J., Massei, N., Seftifgen, K., Thomas, E. K., and Werner, J.: Arctic hydroclimate variability during the last 2000 years – current understanding and research challenges, Clim. Past Discuss., https://doi.org/10.5194/cp-2017-34, in review, 2017.
DOI: 10.17605/osf.io/qt7b2
title: Recursive Cognition

description: An open-source AI cognition experiment exploring recursive self-reference and distinction-making in machine learning models.
DOI: 10.6084/m9.figshare.11536776.v2
title: Extended Data Set : Burden and risk factors for snakebite in India: protocol for a systematic review

description: Extended Data Set : Burden and risk factors for snakebite in India: protocol for a systematic review 1. Prisma-P checklist 2. Search Strategy <br> Peer-reviewed version main article Bhaumik S, Norton R, Jagnoor J. Burden and risk factors for snakebite in India: protocol for a systematic review. F1000Res. 2020 Jan 16;9:25. doi: 10.12688/f1000research.21924.2. PMID: 32399199; PMCID: PMC7194469.
DOI: 10.6084/m9.figshare.27693714.v1
title: A Novel 3D Bilateral Filtering Algorithm with Noise Level Estimation Assisted by Multi-Temporal SAR Experiment Data

description: paper title: A Novel 3D Bilateral Filtering Algorithm with Noise Level Estimation Assisted by Multi-Temporal SAR
DOI: 10.6084/m9.figshare.4898108.v1
title: Supplementary Material for: The Aachen Minipig: Phenotype, Genotype, Hematological and Biochemical Characterization, and Comparison to the Göttingen Minipig

description: <b><i>Background:</i></b> The pig is one of the most frequently used large animal models for biomedical research, especially in the field of translational research and surgical models. While standard livestock breeds are used in short-term and acute studies, minipig breeds are the preferred breeds in long-term and chronic studies due to their limited growth and body weight. <b><i>Objective:</i></b> In consideration of the 3R principle (refinement, reduction, replacement) and the increasing demand, the aim of this study was to generate a new, robust, non-specific-pathogen-free minipig breed, the Aachen minipig. <b><i>Methods:</i></b> Phenotype, genotype, and hematological as well as clinical chemistry parameters were characterized, and reference values of the Aachen minipig were generated and compared to the values in the commonly used Göttingen minipig. Organ weights of the heart, kidney, liver, lung, spleen, and brain were determined using a laboratory balance. Blood samples were collected for hematology and clinical chemistry. Assessment of genetic diversity was performed by microsatellite markers. Nasal swabs were collected from 11 individual minipigs representing 6 races for DNA extraction. DNA was quantified and the identity and origin of the Aachen minipigs at the genomic level was determined by microsatellites. <b><i>Results:</i></b> The Aachen minipig established here is based on the Mini-LEWE breed and consists of the Vietnamese potbelly pig, the Schwäbisch Hällisch Landpig, the German Landrace, and the Minnesota minipig. Relative organ weights (lung, heart, kidneys, brain), hematology (hemoglobin, hematocrit, platelet count, mean corpuscular hemoglobin concentration, segmented neutrophils, lymphocytes, eosinophils, basophils), and clinical chemistry parameters (sodium, calcium, chloride, alkaline phosphatase, aspartate aminotransferase, alanine aminotransferase, gamma-glutamyl transferase, lactate dehydrogenase, triglycerides, blood urea nitrogen, creatinine, total bilirubin, total protein, creatine kinase) of the Aachen minipigs and the Göttingen minipigs were not significantly different. Significant differences where only seen in relative organ weights (liver, spleen), hematology (red blood cell count, mean corpuscular volume, mean corpuscular hemoglobin, white blood cell count, banded neutrophils, monocytes), and clinical chemistry parameters (inorganic phosphorus, potassium, glucose, cholesterol, albumin, amylase). <b><i>Conclusion:</i></b> The Aachen minipig is a suitable model for research due to its similarity to other minipig breeds, especially the Göttingen minipig. The reference values established in this study may be used for the comparison of scientific data and encourage the use of the Aachen minipig as an animal model for biomedical research.
DOI: 10.6084/m9.figshare.7945607.v1
title: Metadata file

description: Metadata describing the 20 unilateral upper limb myoelectric prosthesis users and 20 anatomically intact adults. The metadata file also contains details of the records available for each participant.
DOI: 10.6084/m9.figshare.29094239.v1
title: Figure 5. Based on included data.jpeg

description: Included data
DOI: 10.6084/m9.figshare.7987136.v1
title: Supplementary Material for: Urinary Nephrin as a Biomarker of Glomerular Maturation and Injury Is Associated with Acute Kidney Injury and Mortality in Critically Ill Neonates

description: <b><i>Background:</i></b> Nephrin is a key component of the slit diaphragm of the glomerular podocyte, and increased urinary nephrin level may reflect glomerular injury. <b><i>Objectives:</i></b> To determine whether urinary nephrin is a useful biomarker of glomerular maturation and injury and whether it is associated with acute kidney injury (AKI) and neonatal intensive care unit (NICU) mortality in critically ill neonates. <b><i>Methods:</i></b> Urinary samples were serially collected in 234 neonates during NICU stay for measurements of nephrin, cystatin C (CysC), and albumin. AKI diagnosis was based on neonatal Kidney Disease: Improving Global Outcome (KDIGO) criteria. <b><i>Results:</i></b> Of the neonates, 26 developed AKI and 24 died during NICU stay. The independent contributors to the initial urinary nephrin level obtained on the first 24 h admitted to NICU were gestational age (<i>p</i> = 0.004) and initial urinary CysC level (<i>p</i> &lt; 0.001). Both initial (<i>p</i> = 0.037) and peak (<i>p</i> = 0.039) urinary nephrin were significantly associated with AKI, even after controlling for significant covariates, and had an area under the receiver-operating characteristic curve (AUC) of 0.71 and 0.70, respectively, for predicting AKI. At the optimal cutoff value of 0.375 μg/mg urinary creatinine, the initial urinary nephrin displayed sensitivity of 61.5% and specificity of 76.9% for predicting AKI. The AUCs for initial and peak urinary nephrin to predict NICU mortality were 0.81 and 0.83, respectively. <b><i>Conclusions:</i></b> Urinary nephrin, which may decrease with increasing glomerular maturity, is significantly associated with increased risk for AKI and NICU mortality even after adjustment for potential confounders. A higher level of urinary nephrin may be independently predictive of AKI and NICU mortality in critically ill neonates.
DOI: 10.15468/dl.kc65bg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holtbyrnia innesi (Fowler, 1934)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((45.5755 -13.3048,45.7911 -12.8231,45.6061 -12.3752,45.0241 -12.1382,44.9648 -12.0572,44.9648 -13.45,45.02 -13.4845,45.5755 -13.3048))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013478-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.25156490.v1
title: Channels.mat

description: The spatial location of each channel according to the international 10-20 system.
DOI: 10.6084/m9.figshare.13194005.v1
title: Bottom-up data - sequencing

description: This data supports the de novo determined sequence of a single clone from human plasma IgG1 as described in the manuscript "Human plasma IgG1 repertoires are simple, unique, and dynamic"Data and code for "Human plasma IgG1 repertoires are simple, unique, and dynamic" published in Cell Systems 12, 1-13, by Albert Bondt et al.
DOI: 10.6084/m9.figshare.26495956.v4
title: NetGP

description: Some of the datasets and trained models used in NetGP.
DOI: 10.6084/m9.figshare.25560594.v1
title: <b>Data of</b> <b>Cerebral cortex activation and functional connectivity during low-load resistance training with blood flow restriction: An fNIRS study</b>

description: This dataset includes raw fNIRS data of 23 subjects, and R code for visualization, as well as raw data to do statistical tests in JASP.
DOI: 10.6084/m9.figshare.24523555.v1
title: 21 Sep to 27 Sep.zip (csv format)

description: This set of data consists of electrical parameters for 8 electrical panels. However, data for the DB ML2 and DBML2 panels are missing. Electrical parameters available are voltage, current, frequency, real power, reactive power, apparent power, power factor, and odd harmonics for current.
DOI: 10.6084/m9.figshare.7725161.v1
title: Supplementary Material for: Isoliquiritigenin Attenuates Neuroinflammation in Traumatic Brain Injury in Young Rats

description: <b><i>Objectives:</i></b> Inflammation and apoptosis play a critical role in the pathological progress of traumatic brain injury (TBI). Isoliquiritigenin is a bioactive component extracted from licorice roots, which possesses anti-inflammatory and anti-apoptotic properties. This study aims to investigate the potential effects of isoliquiritigenin on neuroinflammation in a rat model of TBI. <b><i>Methods:</i></b> The SH-SY5Y cells were subjected to cell injury induced by shear stress and the effect of isoliquiritigenin on cell apoptosis was measured. Male rats received a controlled cortical impact to induce TBI and were then treated with isoliquiritigenin (20 mg/kg). Brain edema and contusion volume were measured to assess brain damage. Morris water maze, the beam-balance test, and the beam-walk test were performed to evaluate the cognitive and motor functions. <b><i>Results:</i></b> Levels of proinflammatory cytokines and apoptotic regulators were measured.<b><i></i></b> Results showed that isoliquiritigenin reduced shear stress-induced cell apoptosis in vitro. In young rats subjected to TBI, treatment of isoliquiritigenin reduced brain damage and attenuated motor and cognitive impairments. Isoliquiritigenin also reduced the level of proinflammatory cytokines and Bax and increased Bcl-2 and Bcl-xL in TBI rats. <b><i>Conclusions:</i></b> These findings suggest that<b><i></i></b> isoliquiritigenin possesses beneficial effects in TBI by inhibiting inflammation and apoptosis.
DOI: 10.6084/m9.figshare.22820534.v1
title: PowerGraph

description: We have created a graph dataset that models cascading failure events, which are the main cause of blackouts in power grids. To generate a comprehensive dataset, we used a physics-based cascading failure model called Cascades. This model simulates how failures propagate in a power grid, resulting in the final demand not being served (DNS). Our dataset consists of a large set of power grid states, representing the operating conditions before an outage, and is linked to an initial triggering outage (one or more failed elements). Each power grid state is represented as a graph, with a graph-level label assigned based on the results of the physics-based model. The dataset is designed for various graph-level tasks, such as multi-class classification, binary classification, and regression. Bus and branches are the elements of a power grid, buses include loads and generators which represent the nodes of the graph, while branches include transmission lines and transformers which represent the edges of the graph. We provide three features per node: net active power, net apparent power and voltage magnitude. While the features per edge are four: active power flow, reactive power flow, line reactance and line rating. Finally, we assign ground-truth explanations on the edges, allowing the dataset to be used to benchmark GNN explainability models for graph level tasks.
DOI: 10.6084/m9.figshare.26693686.v1
title: Additional file 3 of eSVD-DE: cohort-wide differential expression in single-cell RNA-seq data using exponential-family embeddings

description: Additional file 3. This file contains the analysis of cycling TA, enterocyte progenitors, TA 1, and TA 2 when analyzing either inflamed or non-inflamed tissues from the Smillie dataset (from [20]). It contains the estimated log-fold change after removing confounding effects, the eSVD-DE test statistic, the negative log10 p-value, and Benjamini-Hochberg adjusted p-value, and whether the gene is deemed to be a DE gene.
DOI: 10.6084/m9.figshare.12436574.v1
title: Clean data from survey of statisticians on Adverse Event analysis practices in RCTs

description: Dataset (Stata v15.1) containing responses from a survey of UK Clinical Research Collaboration registered clinical trial units (CTUs) and industry statisticians from both pharmaceuticals and clinical research organisations (http://dx.doi. org/10.1136/bmjopen-2020- 036875) <br>Data is de-identified. The dataset contains descriptive variables describing participant's experience, as well as responses to questions on current adverse event analysis practices, awareness of specialist methods for adverse event analysis and priorities, concerns and barriers participants experience when analysing adverse event data.
DOI: 10.6084/m9.figshare.5708515.v2
title: Baited Remote Underwater Video (BRUVS): Images and Figures

description: This fileset includes Baited Remote Underwater Video Station (BRUVS) figures/images in TIFF, PNG, PDF, JPG, EPS, and AI formats. Baited Under Water Video Stations (BRUVS) are commonly used to remotely assess aquatic fauna assemblages. There is a wide range of BRUVS configuration and set-ups, however horizontal facing cameras like the ones in this fileset (either single or stereo pairs) are most commonly employed (See Whitmarsh et al. 2017 for a in-depth review of BRUVS research and methodology). The following figures are included: 1) BRUV system on the seafloor 2) BRUV system with a detachable drop camera with live surface feed attached. 3) Stereo BRUV 4) Combined figure 5) Combined figure with detachable drop camera with live surface feed attached. 6) Low resolution figure summary. <br><b>When using this data-set cite either of the following</b>:Fetterplace, L. C., Turnbull, J. W., Knott, N. A. and Hardy, N., A. (2018). "The devil in the deep: expanding the known habitat of a rare and protected fish", 4(1), 22-29. European Journal of Ecology. https://doi.org/10.2478/eje-2018-0003 <br>Fetterplace, L.C. (2018). “The ecology of temperate soft sediment fishes: Implications for fisheries management and marine protected area design". Doctor of Philosophy Thesis, University of Wollongong.
DOI: 10.6084/m9.figshare.10058921.v1
title: Using a maximum entropy model to optimize the stochastic component of urban cellular automata models

description: The stochastic perturbation of urban cellular automata (CA) model is difficult to fine-tune and does not take the constraint of known factors into account when using a stochastic variable, and the simulation results can be quite different when using the Monte Carlo method, reducing the accuracy of the simulated results. Therefore, in this paper, we optimize the stochastic component of an urban CA model by the use of a maximum entropy model to differentially control the intensity of the stochastic perturbation in the spatial domain. We use the kappa coefficient, figure of merit, and landscape metrics to evaluate the accuracy of the simulated results. Through the experimental results obtained for Wuhan, China, the effectiveness of the optimization is proved. The results show that, after the optimization, the kappa coefficient and figure of merit of the simulated results are significantly improved when using the stochastic variable, slightly improved when using Monte Carlo methods. The landscape metrics for the simulated results and actual data are much closer when using the stochastic variable, and slightly closer when using the Monte Carlo method, but the difference between the simulated results is narrowed, reflecting the fact that the results are more reliable.
DOI: 10.6084/m9.figshare.16441413.v1
title: Beebe_LL_Hydraulic_Head.csv

description: Hydraulic head data from monitoring wells surrounding Little Lagoon, AL, USA. All times are GMT-6 and units for head are meters. Data were recorded using HOBO U20s and have been barometrically compensated.
DOI: 10.6084/m9.figshare.22747766.v1
title: RAAAP-3 Variable Mapping

description: RAAAP-3 Variable Mapping - showing mapping from RAAAP-1 .. RAAAP-2 .. RAAAP-3 to aid longitudinal analyses <br> Show which of the data points collected are in each dataset. Some are in more than one dataset. CountryOfEmployment and AnalysisRegionOfEmployment are in all 18 datasets to aid analysis. Note that while some text responses have been redacted, they have also been disaggregated from other individual identifiers in order to preserve anonymity. <br> <br>
DOI: 10.6084/m9.figshare.12443045.v1
title: H3K27ac Signal Track for AKTHY cells

description: Genome-wide signal tracks for each sample were generated in two stages: (i) assess ChIP–seq quality and obtain the predominant fragment length using phantompeakqualtools (https://code.google.com/archive/p/phantompeakqualtools/); (ii) use align2rawsignal (https://code.google.com/archive/p/align2rawsignal/wikis/Method.wiki) to generate signal track (parameters: -n = 5, -k = epanechnikov, -l = [frag-ment length from step (i)], -w = 150, -f = 0).
DOI: 10.6084/m9.figshare.24588102.v1
title: Sedimentary pigment and geochemical data from Luoma Lake in the Huai River Basin.xlsx

description: This dataset for the article DOI: 10.1029/2024WR038925
DOI: 10.6084/m9.figshare.11873790.v1
title: A multivocal literature review on developer experience

description: Dataset used in Master's Thesis titled <b>A multivocal literature review on developer experience</b> at Aalto University school of science
DOI: 10.6084/m9.figshare.19912669.v1
title: rsem counts stranded

description: RSEM output of pbta samples (stranded)
DOI: 10.6084/m9.figshare.26744201.v1
title: Additional file 3 of Deep migration learning-based recognition of diseases and insect pests in Yunnan tea under complex environments

description: Supplementary material 3
DOI: 10.6084/m9.figshare.22691200.v2
title: Untitled Item

description: The MIDOG++ dataset represents an extension of the data set used in the MIDOG 2021 and 2022 challenges. We provide region of interest images from 503 histological specimens of seven different tumor types with variable morphology: breast carcinoma, lung carcinoma, lymphosarcoma, neuroendocrine tumor, cutaneous mast cell tumor, cutaneous melanoma, and (sub)cutaneous soft tissue sarcoma. The human and canine samples were processed and stained at different human and veterinary pathology laboratories with standard H&E dye and digitized with different digital whole slide image scanners. We provide labels for 11,937 mitotic figures that have been differentiated against 14,351 imposter cells in a blinded consensus by two pathologists and a final decision by a third pathologist for disagreed labels.
DOI: 10.6084/m9.figshare.23803938.v2
title: The chromosome-level haploid genome Assembly of Malus domestica ‘Fuji’

description: Apple (Malus domestica) is one of the main cultivated fruit trees in China, and the 'Red Fuji' apple (Malus domestica cv. Red Fuji) is the predominant apple cultivar in the country. Molecular-assisted breeding based on genomic sequence information has made significant achievements in apple breeding. Genome sequencing and annotation provide a more comprehensive understanding of genetic information, especially species-specific genes. Analysing the haploid genome of a heterozygous diploid organism helps explore the differential gene expression derived from the parental genomes. We have successfully deciphered the haploid genome of the 'Red Fuji' apple, and the complete and accurate haploid genome provides a solid foundation for subsequent comparative genomics and transcriptome analyses. In the future, further integration of the Fuji apple genome with other omics data will enhance our understanding of the biological characteristics of the Fuji apple. This will facilitate apple quality improvement and the development of new apple varieties through targeted breeding efforts. By harnessing the power of genomics and molecular-assisted breeding, we can identify desirable traits and accelerate the breeding process, ultimately leading to the production of improved apple cultivars that meet the demands of consumers and the industry.
DOI: 10.6084/m9.figshare.4630240.v1
title: scripts U-V-W-X-Y-Z

description: Movie scripts starting with U-V-W-X-Y-Z