cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5036901
title: Light quantity controls locomotion in photosymbiotic Aiptasia

description: Many cnidarians engage in endosymbiotic relationships with photosynthetic microalgae in the family Symbiodiniaceae. This symbiosis is deeply integrated into the physiology of the host. Although positive phototaxis and phototropism have been reported for symbiotic cnidarians, it is currently unknown whether light quantity influences phototactic behavior. Here we tested behavior of aposymbiotic (without Symbiodiniaceae) and symbiotic (with Symbiodiniaceae) Aiptasia in a light gradient to assess presence and effect of phototactic behavior.
DOI: 10.15468/ck6q2k
title: A new Entomolepididae genus and a new species of Spongiopsyllus Johnsson, 2000 (Copepoda, Siphonostomatoida) and their association with Aplysina Nardo, 1834 (Porifera, Demospongiae) in Todos-os-Santos Bay, Bahia, Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Borges, Camila, Farias, Amilcar, Mácola, Rosa, Neves, Elizabeth G., Son, Rodrigo Johns- (2021): A new Entomolepididae genus and a new species of Spongiopsyllus Johnsson, 2000 (Copepoda, Siphonostomatoida) and their association with Aplysina Nardo, 1834 (Porifera, Demospongiae) in Todos-os-Santos Bay, Bahia, Brazil. Zootaxa 4981 (2): 301-316, DOI: https://doi.org/10.11646/zootaxa.4981.2.5
DOI: 10.6073/pasta/d7a482a649f046a9894f04a4fc26fb95
title: Blue Mussel Stable Isotope Analysis on Islands of the Virginia Coast

description: Blue Mussel Stable Isotope Analysis on Islands of the Virginia Coast As climate change causes ocean temperatures to rise, some intertidal organisms, like blue mussels (Mytilus edulis), are retreating northward. Species that consume blue mussels, like the federally-threatened red knot (Calidris canutus rufa), may be negatively affected by this range contraction. We investigated the variation in blue mussel abundance from 2010 - 2018 on Virginia's barrier islands, where migrating red knots eat recently settled blue mussels, and compared the oxygen isotopic composition of blue mussel shell calcite (delta^18Oc; n = 74) to delta^18Oc, which is calculated to be in equilibrium with regional ocean water, to predict their origins. During peak red knot migration (May 14 - 27), between 34 - 538 blue mussels were available/core sample, with blue mussel abundance decreasing over time. Stable isotope analyses indicated that shell umbo delta^18Oc (mean = -0.23o/oo, SE = 0.12) was more ^18O enriched than shell edge delta^18Oc (mean = -0.53 o/oo, SE = 0.10). Blue mussel umbo delta^18Oc was not different than the range of delta^18Oc calculated in equilibrium with regional ocean water off the Virginia and Delaware coasts. Umbo delta^18Oc was more ^18O enriched than the expected estuarine signature at the Delaware Bay's mouth, precluding an estuarine origin, and more ^16O enriched than the expected delta^18Oc off New Hampshire's coast, likely precluding an origin that far north. We concluded that Virginia's juvenile blue mussels likely originated in the regional ocean between the Delaware Bay and Virginia. Continued increases in regional sea surface temperature may further affect the availability of blue mussels to foraging red knots in Virginia.
DOI: 10.6084/m9.figshare.14885069
title: The geochemical evolution of the Logan Igneous Suite, Ontario, Canada: new insights from the Logan Basin and implications for the genesis of the Mesoproterozoic Midcontinent Rift System

description: Table S1. Geochemical data and descriptions
DOI: 10.6084/m9.figshare.14885069.v1
title: The geochemical evolution of the Logan Igneous Suite, Ontario, Canada: new insights from the Logan Basin and implications for the genesis of the Mesoproterozoic Midcontinent Rift System

description: Table S1. Geochemical data and descriptions
DOI: 10.6084/m9.figshare.14885075
title: Relicts of Paleoproterozoic LIPs in the Belomorian province, eastern Fennoscandian Shield: barcode reconstruction for a deeply eroded collisional orogen

description: Table S1. Data on chemical composition of Paleoproterozoic mafic dykes and 20 intrusions in the Belomorian Province
DOI: 10.6084/m9.figshare.14885075.v1
title: Relicts of Paleoproterozoic LIPs in the Belomorian province, eastern Fennoscandian Shield: barcode reconstruction for a deeply eroded collisional orogen

description: Table S1. Data on chemical composition of Paleoproterozoic mafic dykes and 20 intrusions in the Belomorian Province
DOI: 10.6073/pasta/5a0987f88f6543867164bca95eb7ba74
title: Red Knot observations on the Virginia Coast, 2007-2019

description: Red Knot observations on the Virginia Coast, 2007-2019 Understanding factors that influence a species' distribution and abundance across the annual cycle is required for range-wide conservation. Thousands of imperiled red knots (Calidris cantus rufa) stop on Virginia's barrier islands each year to replenish fat during spring migration. We investigated the variation in red knot presence and flock size, the effects of prey on this variation, and factors influencing prey abundance on Virginia's barrier islands. We counted red knots and collected potential prey samples at randomly selected sites from 2007 - 2018 during a two-week period during early and peak migration. Core samples contained crustaceans (Orders Amphipoda and Calanoida), blue mussels (Mytilus edulis), coquina clams (Donax variabilis), and miscellaneous prey (horseshoe crab eggs (Limulus polyphemus), angel wing clams (Cyrtopleura costata), and other organisms (e.g., insect larvae, snails, worms)). Estimated red knot numbers in Virginia during peak migration were highest in 2012 (11,959) and lowest in 2014 (2,857; 12-year peak migration xÃŒâ€ž = 7,175, SD = 2,869). Red knot and prey numbers varied across sampling periods and substrates (i.e., peat and sand). Red knots generally used sites with more prey. Miscellaneous prey (xÃŒâ€ž = 18.85/core sample, SE = 0.88) influenced red knot presence at a site early in migration, when we only sampled on peat banks. Coquina clams (xÃŒâ€ž = 11/core sample, SE = 0.30) and blue mussels (xÃŒâ€ž = 0.94/core sample, SE = 0.04) affected red knot presence at a site during peak migration, when we sampled both substrates. Few relationships between prey and red knot flock size existed, suggesting that other unmeasured factors determined red knot numbers at occupied sites. Tide and mean daily water temperature affected prey abundance. Maximizing the diversity, availability, and abundance of prey for red knots on barrier islands requires management that encourages the presence of both sand and peat bank intertidal habitats.
DOI: 10.6084/m9.figshare.13313072
title: Comprehensive Analysis of Different Contemporary Barley Genotypes Enhances and Expands the Scope of Barley Contributions to Beer Flavor

description: Recent research has demonstrated contributions of barley genotype to beer flavor based on the progeny of a cross between an heirloom and a more contemporary barley variety. To advance this line of research, the current study used two independent sets of barley germplasm to address the contributions of different barley genotypes to beer flavor. Pedigree, quality of malt and beer, and beer metabolomic profiles were compared within and between the two sets. Utilizing both laboratory and consumer panels, differences in sensory attributes of malt hot steeps and lager beers that are attributable to barley genotype were investigated. Genotype, in this context, is defined in the broadest sense to include experimental germplasm and released varieties. Results concur with previous studies: the two sets of barley germplasm were found to have, both within and between, distinct but subtle differences in flavor profiles of malt hot steeps and finished lager beers. Distinct metabolomic profiles, attributable to barley genotype, were detected. Further, covariation of metabolomic profiles and sensory attributes were identified using data from both sensory panels. These observations lead to the conclusion that the variable metabolites observed among the two sets of barley germplasm are a direct result of genetic differences that lead to differential chemical responses within the malting and brewing processes.
DOI: 10.6084/m9.figshare.13303244
title: Soft Tribology Using Rheometers: A Practical Guide and Introduction

description: Soft tribology (i.e., the measurement of friction as a function of speed between two compliant surfaces) has found applications in food science and there is a growing wealth of theoretical and practical knowledge of fundamental mechanisms of lubrication as well as increasingly strong correlations between tribology and sensory data. Soft tribology is generally conducted using either commercial or in-house built tribometers; however, the recent decade has seen a rise in the use of rheometers with tribology attachments. As such, soft tribological measurements using rheometers with tribological attachments are fast becoming a tool in the food scientists’ toolbox when it comes to measuring mouthfeel, but the lack of fundamental studies and standardized measuring protocols makes interpretation and comparison across studies challenging. This review aims to provide an introduction to the basics of soft tribology as well as summarize current methodologies and fundamental knowledge on using rheometers for tribological measurements. Based on current literature, knowledge gaps and potential avenues for future research have been identified. These include investigations on hydrophobicity of surfaces, surface wear (running-in), cleaning procedure of the attachment and tribopairs, speed (range and method of increase/decrease) and measuring system configuration. Leaving the aim and design of experiments at the discretion of the individual researcher, recommendations for food scientists aiming to conduct studies on soft tribology of food are given, with a focus on reporting for better comparison between studies.
DOI: 10.6084/m9.figshare.13313072.v1
title: Comprehensive Analysis of Different Contemporary Barley Genotypes Enhances and Expands the Scope of Barley Contributions to Beer Flavor

description: Recent research has demonstrated contributions of barley genotype to beer flavor based on the progeny of a cross between an heirloom and a more contemporary barley variety. To advance this line of research, the current study used two independent sets of barley germplasm to address the contributions of different barley genotypes to beer flavor. Pedigree, quality of malt and beer, and beer metabolomic profiles were compared within and between the two sets. Utilizing both laboratory and consumer panels, differences in sensory attributes of malt hot steeps and lager beers that are attributable to barley genotype were investigated. Genotype, in this context, is defined in the broadest sense to include experimental germplasm and released varieties. Results concur with previous studies: the two sets of barley germplasm were found to have, both within and between, distinct but subtle differences in flavor profiles of malt hot steeps and finished lager beers. Distinct metabolomic profiles, attributable to barley genotype, were detected. Further, covariation of metabolomic profiles and sensory attributes were identified using data from both sensory panels. These observations lead to the conclusion that the variable metabolites observed among the two sets of barley germplasm are a direct result of genetic differences that lead to differential chemical responses within the malting and brewing processes.
DOI: 10.6073/pasta/925f84652f1d8590de1da00bd136b005
title: Continuous precipitation and stream chemistry data, Hubbard Brook Ecosystem Study, 1963 – present.

description: The Hubbard Brook Ecosystem Study officially began on 1 June 1963. This archive contains HBWatER, the results of &gt;50 years of collection and analysis of weekly stream water and precipitation samples obtained from 1 June 1963 to the most recently approved water year. Stream chemistry is reported for nine gauged watersheds and the mainstem of Hubbard Brook. Precipitation chemistry is reported for rain collectors on both the north facing and south facing slopes of the Hubbard Brook valley. All solute data are reported as concentrations in (mg/l). HBWatER originated with the idea of applying the small watershed approach to study element flux and cycling through intact ecosystems. These chemical data have been used in conjunction with continuous streamflow and precipitation records to estimate watershed biogeochemical inputs and outputs. Such records have been instrumental in: identifying the existence and the impact of acid rain and then documenting its decline and legacy impacts on forested watersheds; documenting the effects of deforestation and natural forest disturbance on ecosystem nutrient exports; and in constructing element budgets for ecosystems over succession. Hundreds of published papers have taken advantage of HBWatER to understand how elements cycle through ecosystems. These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.
DOI: 10.5281/zenodo.5046016
title: Data from: A sink host allows a specialist herbivore to persist in a seasonal source

description: <strong>Filename: </strong>1_Population_growth_rate.xlsx Variables: 1. Source host - the plant species from which experimental females were transferred <br> 2. Target host - the plant species to which experimental females were transferred<br> 3. Generations - tested time period, in generations<br> 4. N<sub>0</sub> - the number of females placed at the beginning of the experiment<br> 5. N - the number of mites (being a progeny of N<sub>0</sub> females) counted after each tested time period <strong>Filename: </strong>2_Emigration_dispersal.xlsx Variables: 1. Source host - the plant species infested by mites and exposed to wind<br> 2. Target host - the plant species toward which mites could disperse<br> 3. N - population size on the source host<br> 4. D - the number of individuals that dispersed from the source host <strong>Filename: </strong>3_Emigration_acceptance.xlsx Variables: 1. Source host - the plant species from which experimental females were transferred <br> 2. Target host - the plant species to which experimental females were transferred<br> 3. N - the number of females placed on the experimental arena<br> 4. R - the number of females that stayed on the experimental arena after incubation <strong>Filename: </strong>4_Experimental_evolution.xlsx Variables: 1. Regime - host selection regime (W - wheat; B - brome; WB - wheat-brome alternating each three generations on each host species)<br> 2. Generations - the number of generations the population survived<br> 3. Status - 0 - censored observation; 1 - observed event of extinction <strong>Filename: </strong>5_Field_database.xlsx Variables: 1. Sampling date - date of plant collection in the field<br> 2. Day - the day of the year when the sample was collected<br> 3. Year - the year of the sample collection<br> 4. Database - N: the sample collected during 2012-2014 surveys; O: the sample collected during 2007-2014 surveys<br> 5. Host - the plant species collected<br> 6. GPS lat. [N] - the latitude in the northern hemisphere<br> 7. GPS long. [E] - the longitude in the eastern hemisphere<br> 8. n - the number of all plant shoots examined<br> 9. k - the number of plant shoots infested
description: The study was supported by the National Science Centre, Poland (NSC); research grant no. 2017/27/N/NZ8/00305 (tasks: assessing the population growth rate and host acceptance; experimental evolution); NSC research grant no. 2016/21/B/NZ8/00786 (tasks: establishing the stock population - including field work, barcoding and maintaining; assessing the dispersal rate). AL scholarships were funded by European Social Funds POWR.03.02.00–00–I006/17, NSC (PhD scholarship no. 2019/32/T/NZ8/00151) and Adam Mickiewicz University Foundation (awarded in 2019/2020). LK was involved in this work while supported by the NSC grant 2018/29/B/NZ8/00066. SMe became involved in this work while supported by a US Fulbright Scholarship.
DOI: 10.15468/qxtt7h
title: An annotated checklist of Ciidae (Coleoptera: Tenebrionoidea) of Iran

description: This dataset contains the digitized treatments in Plazi based on the original journal article Drogvalenko, Alexander N., Ghahari, Hassan (2021): An annotated checklist of Ciidae (Coleoptera: Tenebrionoidea) of Iran. Zootaxa 4981 (2): 317-330, DOI: https://doi.org/10.11646/zootaxa.4981.2.6
DOI: 10.6084/m9.figshare.14848026.v1
title: Data from Cassidy et al 2021 - Animal Behaviour

description: Dataset collected for Cassidy et al 2021 (Animal Behaviour) -Disease defences across levels of biological organization: individual and social immunity in acorn ants<br>Tab 1 - Demography on wild collected colonies<br><br>Tab 2 - Time to death assay measurements<br><br>Tab 3 - Corpse removal assays<br>
DOI: 10.5517/ccdc.csd.cc2169zk
title: CCDC 1882908: Experimental Crystal Structure Determination

description: Related Article: Ning Li, Penghao Jia, You Huang|2019|Chem.Commun.|55|10976|doi:10.1039/C9CC05832J
description: Related Article: Ning Li|2019|CSD Communication|||
DOI: 10.6084/m9.figshare.7765082.v1
title: Experimental data to replicative ageing model

description: Data for both young and old cells for paper "Repair, resilience and asymmetric segregation of damage in the context of replicative agein: it is a balancing act" with doi []. In the .zip file there is the .tif files with the images sequence and the .roi files for the measured cells.
DOI: 10.6084/m9.figshare.7765082
title: Experimental data to replicative ageing model

description: Data for both young and old cells for paper "Repair, resilience and asymmetric segregation of damage in the context of replicative agein: it is a balancing act" with doi []. In the .zip file there is the .tif files with the images sequence and the .roi files for the measured cells.
DOI: 10.5517/ccdc.csd.cc281wdm
title: CCDC 2087180: Experimental Crystal Structure Determination

description: Related Article: S.A.H. Al-Waleedy, S.K. Mohamed, J.T. Mague, M. Akkurt, M.S. Abbady, E.A. Bakhite|2021|Acta Crystallogr.,Sect.E:Cryst.Commun.|77|730|doi:10.1107/S2056989021005600
DOI: 10.5517/ccdc.csd.cc285f85
title: CCDC 2090586: Experimental Crystal Structure Determination

description: Related Article: T. Mehmood, R.S. Bhosale, J.P. Reddy|2021|Acta Crystallogr.,Sect.E:Cryst.Commun.|77|726|doi:10.1107/S2056989021006277
DOI: 10.5517/ccdc.csd.cc285scm
title: CCDC 2090930: Experimental Crystal Structure Determination

description: Related Article: J.A. Polito-Lucas, J.A. Núñez-Ávila, S. Bernès, A. Pérez-Benítez|2021|IUCrData|6|x210634|doi:10.1107/S2414314621006349
DOI: 10.5517/ccdc.csd.cc2862j3
title: CCDC 2091214: Experimental Crystal Structure Determination

description: Related Article: M. Knorr, L. Viau, Y. Rousselin, M.M. Kubicki|2021|Acta Crystallogr.,Sect.E:Cryst.Commun.|77|744|doi:10.1107/S2056989021006460
DOI: 10.5517/ccdc.csd.cc2866xm
title: CCDC 2091350: Experimental Crystal Structure Determination

description: Related Article: F.N. Naghiyev, M.M. Grishina, V.N. Khrustalev, M. Akkurt, A.T. Huseynova, A.A. Akobirshoeva, İ.G. Mamedov|2021|Acta Crystallogr.,Sect.E:Cryst.Commun.|77|739|doi:10.1107/S2056989021006459
DOI: 10.6084/m9.figshare.14848026.v2
title: Data from Cassidy et al 2021 - Animal Behaviour

description: Dataset collected for Cassidy et al 2021 (Animal Behaviour) -Disease defences across levels of biological organization: individual and social immunity in acorn ants<br>Tab 1 - Demography on wild collected colonies<br><br>Tab 2 - Time to death assay measurements<br><br>Tab 3 - Corpse removal assays<br>
DOI: 10.5281/zenodo.5046068
title: Data from: A sink host allows a specialist herbivore to persist in a seasonal source

description: <strong>Filename: </strong>1_Population_growth_rate.xlsx Variables: 1. Source host - the plant species from which experimental females were transferred <br> 2. Target host - the plant species to which experimental females were transferred<br> 3. Generations - tested time period, in generations<br> 4. N<sub>0</sub> - the number of females placed at the beginning of the experiment<br> 5. N - the number of mites (being a progeny of N<sub>0</sub> females) counted after each tested time period <strong>Filename: </strong>2_Emigration_dispersal.xlsx Variables: 1. Source host - the plant species infested by mites and exposed to wind<br> 2. Target host - the plant species toward which mites could disperse<br> 3. N - population size on the source host<br> 4. D - the number of individuals that dispersed from the source host <strong>Filename: </strong>3_Emigration_acceptance.xlsx Variables: 1. Source host - the plant species from which experimental females were transferred <br> 2. Target host - the plant species to which experimental females were transferred<br> 3. N - the number of females placed on the experimental arena<br> 4. R - the number of females that stayed on the experimental arena after incubation <strong>Filename: </strong>4_Experimental_evolution.xlsx Variables: 1. Regime - host selection regime (W - wheat; B - brome; WB - wheat-brome alternating each three generations on each host species)<br> 2. Generations - the number of generations the population survived<br> 3. Status - 0 - censored observation; 1 - observed event of extinction <strong>Filename: </strong>5_Field_database.xlsx Variables: 1. Sampling date - date of plant collection in the field<br> 2. Day - the day of the year when the sample was collected<br> 3. Year - the year of the sample collection<br> 4. Database - N: the sample collected during 2012-2014 surveys; O: the sample collected during 2007-2014 surveys<br> 5. Host - the plant species collected<br> 6. GPS lat. [N] - the latitude in the northern hemisphere<br> 7. GPS long. [E] - the longitude in the eastern hemisphere<br> 8. n - the number of all plant shoots examined<br> 9. k - the number of plant shoots infested
description: The study was supported by the National Science Centre, Poland (NSC); research grant no. 2017/27/N/NZ8/00305 (tasks: assessing the population growth rate and host acceptance; experimental evolution); NSC research grant no. 2016/21/B/NZ8/00786 (tasks: establishing the stock population - including field work, barcoding and maintaining; assessing the dispersal rate). AL scholarships were funded by European Social Funds POWR.03.02.00–00–I006/17, NSC (PhD scholarship no. 2019/32/T/NZ8/00151) and Adam Mickiewicz University Foundation (awarded in 2019/2020). LK was involved in this work while supported by the NSC grant 2018/29/B/NZ8/00066. SMe became involved in this work while supported by a US Fulbright Scholarship.