cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5495245
title: Generated RGBD Tracking Benchmarks (LaSOT) Part 08

description: We convert the existing RGB tracking benchmarks, eg. LaSOT, to RGB+pseudo-Depth tracking benchmarks using DenseDepth or HighResDepth monocular depth estimation methods.
DOI: 10.5281/zenodo.5495242
title: Generated RGBD Tracking Benchmarks (LaSOT) Part 07

description: We convert the existing RGB tracking benchmarks, eg. LaSOT, to RGB+pseudo-Depth tracking benchmarks using DenseDepth or HighResDepth monocular depth estimation methods.
DOI: 10.5281/zenodo.5495241
title: Generated RGBD Tracking Benchmarks (LaSOT) Part 07

description: We convert the existing RGB tracking benchmarks, eg. LaSOT, to RGB+pseudo-Depth tracking benchmarks using DenseDepth or HighResDepth monocular depth estimation methods.
DOI: 10.5519/qd.00xhilj1
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4 records)
DOI: 10.5519/qd.513odmgf
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (10 records)
DOI: 10.5519/qd.etoffutc
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (10 records)
DOI: 10.5519/qd.ac0eoff3
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2 records)
DOI: 10.5519/qd.9x3nywwz
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3 records)
DOI: 10.5519/qd.2wtxnt3n
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4 records)
DOI: 10.5519/qd.lz86ogqd
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3 records)
DOI: 10.5519/qd.uv0heanr
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2 records)
DOI: 10.5281/zenodo.5495255
title: Generated RGBD Tracking Benchmarks (LaSOT) Part 10

description: We convert the existing RGB tracking benchmarks, eg. LaSOT, to RGB+pseudo-Depth tracking benchmarks using DenseDepth or HighResDepth monocular depth estimation methods.
DOI: 10.5281/zenodo.5495254
title: Generated RGBD Tracking Benchmarks (LaSOT) Part 10

description: We convert the existing RGB tracking benchmarks, eg. LaSOT, to RGB+pseudo-Depth tracking benchmarks using DenseDepth or HighResDepth monocular depth estimation methods.
DOI: 10.5281/zenodo.5495951
title: Barley recombination open data

description: Data concerning the publication "Genomic prediction of the recombination rate variation in barley – A route to highly recombinogenic genotypes".
DOI: 10.5281/zenodo.5495950
title: Barley recombination open data

description: Data concerning the publication "Genomic prediction of the recombination rate variation in barley – A route to highly recombinogenic genotypes".
DOI: 10.5519/qd.iuhtvjnh
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (52 records)
DOI: 10.6084/m9.figshare.13664870
title: Reproductive sequence of 758 female rhesus macaques on Cayo Santiago

description: This dataset contains reproductive trajectory of 758 female rhesus macaques of Cayo Santiago. The paper that describes the data and associated analyses is currently under review (as of Jan 29 2021).<br>1. ID: unique ID of 758 individuals.2. Birth season: unique number assigned to each year ('birth season) in which a birth cohort was born.3. Never reproduced: TRUE if an individual never reproduced.4. Age: Age (in years) at a given year5. Reproduced: TRUE if an individual reproduced in a given year.6. Age at death: Age (in years) at which an individual was observed to be dead.7. Rank: Rank categories (0 = high, 1 = middle, 2 = low, NA = rank unknown)8. Age at last reproduction9. Age at first reproduction10. Years into reproduction: Years passed since the first reproduction.11. Years to death: Years remaining until death.
DOI: 10.6084/m9.figshare.13664870.v1
title: Reproductive sequence of 758 female rhesus macaques on Cayo Santiago

description: This dataset contains reproductive trajectory of 758 female rhesus macaques of Cayo Santiago. The paper that describes the data and associated analyses is currently under review (as of Jan 29 2021).<br>1. ID: unique ID of 758 individuals.2. Birth season: unique number assigned to each year ('birth season) in which a birth cohort was born.3. Never reproduced: TRUE if an individual never reproduced.4. Age: Age (in years) at a given year5. Reproduced: TRUE if an individual reproduced in a given year.6. Age at death: Age (in years) at which an individual was observed to be dead.7. Rank: Rank categories (0 = high, 1 = middle, 2 = low, NA = rank unknown)8. Age at last reproduction9. Age at first reproduction10. Years into reproduction: Years passed since the first reproduction.11. Years to death: Years remaining until death.
DOI: 10.6084/m9.figshare.13238861
title: Scientific narratives about academic time management

description: The purpose of this article is to critically analyze the dominant scientific narratives on the study of the effective use of time by students and to rekindle interest in this issue based on the most recent findings in socio-humanistic research. To this end, this study was designed based on a critical review of the literature from 1990 to 2020. The Wos of Science and Scopus databases were consulted. A total of 45 papers met the inclusion criteria.A literature review was carried out to gain more in-depth knowledge of the narratives and accounts provided by researchers regarding students’ academic time management. The keywords selected were extracted from ERIC and the search timeline comprised papers published between 1990 and 2020. The search databases selected were Web of Science (Wos) and Scopus. The search terms were combined based on the following expressions (time management AND race, time management AND minority groups; time management AND gender differences, time management AND ADHD, time management AND disabilities). Selection criteria (1) Extracted from relevant sources such as high impact and peer review journals. (2) Published in English or Spanish. (3) Including the search terms mentioned in the title, keywords or abstract. (4) Methodological pluralism (quantitative, qualitative or mixed methods). (5) Sample studied: students from primary, middle, high school and college.Selection of studies Following the timelines and search terms specified, 75 results were obtained from the databases. Twelve of these were eliminated as they appeared in both databases, while a further 18 were not considered suitable for the sample studied. Forty-five papers were selected in total.
DOI: 10.6084/m9.figshare.13238861.v3
title: Scientific narratives about academic time management

description: The purpose of this article is to critically analyze the dominant scientific narratives on the study of the effective use of time by students and to rekindle interest in this issue based on the most recent findings in socio-humanistic research. To this end, this study was designed based on a critical review of the literature from 1990 to 2020. The Wos of Science and Scopus databases were consulted. A total of 45 papers met the inclusion criteria.A literature review was carried out to gain more in-depth knowledge of the narratives and accounts provided by researchers regarding students’ academic time management. The keywords selected were extracted from ERIC and the search timeline comprised papers published between 1990 and 2020. The search databases selected were Web of Science (Wos) and Scopus. The search terms were combined based on the following expressions (time management AND race, time management AND minority groups; time management AND gender differences, time management AND ADHD, time management AND disabilities). Selection criteria (1) Extracted from relevant sources such as high impact and peer review journals. (2) Published in English or Spanish. (3) Including the search terms mentioned in the title, keywords or abstract. (4) Methodological pluralism (quantitative, qualitative or mixed methods). (5) Sample studied: students from primary, middle, high school and college.Selection of studies Following the timelines and search terms specified, 75 results were obtained from the databases. Twelve of these were eliminated as they appeared in both databases, while a further 18 were not considered suitable for the sample studied. Forty-five papers were selected in total.
DOI: 10.21949/1523083
title: Rural Speed Safety Project for USDOT Safety Data Initiative [large dataset direct download link]
DOI: 10.25919/syr4-1s88
title: Parkes observations for project P1066 semester 2021APRS_04

description: We propose 36 hrs of Parkes observations to continue our successful Deeper, Wider, Faster (DWF) program to detect fast transients and fast radio burst (FRB) counterparts and help resolve their nature. DWF coordinates over 80 observatories worldwide at all wavelengths, from radio to gamma-ray to detect and follow-up FRBs and other elusive fast (millisecond-to-hours duration) transients. Crucially, we coordinate simultaneous deep, fast-cadenced, wide-field observations at all wavelengths to observe the same field at the same time as Parkes, enabling multi-wavelength detection before, during, and after the radio detection. Little to no multi-wavelength observations to any significant depth have been done on these timescales, leaving this parameter space underexplored. DWF coordinates major facilities to observe with Parkes, such as South Pole Telescope (mm/sub-mm), GROND (infrared), CTIO Dark Energy Camera (optical), Astrosat (UV/X-ray), HXMT (X-ray), HESS (gamma-ray), and Pierre Auger (high-energy). We perform realtime data processing and transient identification at all wavelengths that enables triggering our deep, rapid-response (within minutes) follow up programs for deep spectroscopy and imaging using the world's largest telescopes (e.g., Keck, VLT, Gemini, SALT, ATCA).
DOI: 10.25919/ta8x-gg44
title: Parkes observations for project P1066 semester 2021APRS_05

description: We propose 36 hrs of Parkes observations to continue our successful Deeper, Wider, Faster (DWF) program to detect fast transients and fast radio burst (FRB) counterparts and help resolve their nature. DWF coordinates over 80 observatories worldwide at all wavelengths, from radio to gamma-ray to detect and follow-up FRBs and other elusive fast (millisecond-to-hours duration) transients. Crucially, we coordinate simultaneous deep, fast-cadenced, wide-field observations at all wavelengths to observe the same field at the same time as Parkes, enabling multi-wavelength detection before, during, and after the radio detection. Little to no multi-wavelength observations to any significant depth have been done on these timescales, leaving this parameter space underexplored. DWF coordinates major facilities to observe with Parkes, such as South Pole Telescope (mm/sub-mm), GROND (infrared), CTIO Dark Energy Camera (optical), Astrosat (UV/X-ray), HXMT (X-ray), HESS (gamma-ray), and Pierre Auger (high-energy). We perform realtime data processing and transient identification at all wavelengths that enables triggering our deep, rapid-response (within minutes) follow up programs for deep spectroscopy and imaging using the world's largest telescopes (e.g., Keck, VLT, Gemini, SALT, ATCA).
DOI: 10.5281/zenodo.5335902
title: reservatoriosBR

description: Pacote em R para obtenção de dados históricos e atuais dos principais reservatórios brasileiros.
DOI: 10.5281/zenodo.5335901
title: reservatoriosBR

description: Pacote em R para obtenção de dados históricos e atuais dos principais reservatórios brasileiros.
DOI: 10.5281/zenodo.5495812
title: MAX-DOAS tropospheric NO2 column measurements in Islamabad, Pakistan (33°N, 73°E) from 2015 to 2019 and comparisons with OMI and TROPOMI satellite data

description: This data presents an intercomparison of NO<sub>2</sub> retreival settings using Differential Optical Absorption Spectroscopy (DOAS) and those based on literature published over last 20 years. Moreover, it presents comparison of NO<sub>2</sub> Vertical Column Densities(VCD) obtained from ground based MAX-DOAS in Islamabad, Pakistan with satellite data from 2015-2019. MAX-DOAS has retrieved data at seven elevation angles i.e., 2, 4, 5, 10, 15, 30, 45. On the other hand, VCDs are in molecules per cm<sup>2</sup>. However, in order to collect NO2 dataset, DOASIS was used was used to obtain data from MAX-DOAS and further analyzed using QDOAS. Then geometric approximation was applied to obtain VCDs that are presented in this data set.
DOI: 10.5281/zenodo.5495811
title: MAX-DOAS tropospheric NO2 column measurements in Islamabad, Pakistan (33°N, 73°E) from 2015 to 2019 and comparisons with OMI and TROPOMI satellite data

description: This data presents an intercomparison of NO<sub>2</sub> retreival settings using Differential Optical Absorption Spectroscopy (DOAS) and those based on literature published over last 20 years. Moreover, it presents comparison of NO<sub>2</sub> Vertical Column Densities(VCD) obtained from ground based MAX-DOAS in Islamabad, Pakistan with satellite data from 2015-2019. MAX-DOAS has retrieved data at seven elevation angles i.e., 2, 4, 5, 10, 15, 30, 45. On the other hand, VCDs are in molecules per cm<sup>2</sup>. However, in order to collect NO2 dataset, DOASIS was used was used to obtain data from MAX-DOAS and further analyzed using QDOAS. Then geometric approximation was applied to obtain VCDs that are presented in this data set.
DOI: 10.6084/m9.figshare.3761562.v1975
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.5281/zenodo.5495268
title: Load-Displacement History Data and Video Recording of Norway Spruce Compression Experiment Perpendicular to Grain Direction

description: This dataset contains load-displacement history of Norway Spruce compression experiments perpendicular to grain direction and the video recordings. The experiment utilized the Zwick RK 250/50 <em>Universal Testing Machine</em> (UTM) with HBM U2A load cell set at 200kN capacity, while video was recorded by Canon EOS 5DS R mounted on a tripod. Unfortunately the recording failed while recording specimen 3, hence only part of the beginning of the experiment is available. Video files of specimens 1 and 2 are separated with winrar due to large file sizes
DOI: 10.5281/zenodo.5495753
title: Data extraction and synthesis table

description: Table showing the data extraction and synthesis for a recent paper submission.
DOI: 10.5281/zenodo.5495752
title: Data extraction and synthesis table

description: Table showing the data extraction and synthesis for a recent paper submission.
DOI: 10.5281/zenodo.5493479
title: Data and software supporting the manuscript 'The population frequency of human mitochondrial DNA variants is highly dependent upon mutational bias'

description: Next-generation sequencing can quickly reveal genetic variation potentially linked to heritable disease. As databases encompassing human variation continue to expand, rare variants have been of high interest, since the frequency of a variant is expected to be low if the genetic change leads to a loss of fitness or fecundity. However, the use of variant frequency when seeking genomic changes linked to disease remains very challenging. Here, we explore the role of selection in controlling human variant frequency using the HelixMT database, which encompasses hundreds of thousands of mitochondrial DNA (mtDNA) samples. We find that a substantial number of synonymous substitutions, which have no effect on protein sequence, were never encountered in this large study, while many other synonymous changes are found at very low frequencies. Further analyses of human and mammalian mtDNA datasets indicate that the population frequency of synonymous variants is predominantly determined by mutational biases rather than by strong selection acting upon nucleotide choice. Our work has important implications that extend to the interpretation of variant frequency for non-synonymous substitutions.
description: See: https://doi.org/10.1101/2021.05.12.443844
DOI: 10.5281/zenodo.5493478
title: Data and software supporting the manuscript 'The population frequency of human mitochondrial DNA variants is highly dependent upon mutational bias'

description: Next-generation sequencing can quickly reveal genetic variation potentially linked to heritable disease. As databases encompassing human variation continue to expand, rare variants have been of high interest, since the frequency of a variant is expected to be low if the genetic change leads to a loss of fitness or fecundity. However, the use of variant frequency when seeking genomic changes linked to disease remains very challenging. Here, we explore the role of selection in controlling human variant frequency using the HelixMT database, which encompasses hundreds of thousands of mitochondrial DNA (mtDNA) samples. We find that a substantial number of synonymous substitutions, which have no effect on protein sequence, were never encountered in this large study, while many other synonymous changes are found at very low frequencies. Further analyses of human and mammalian mtDNA datasets indicate that the population frequency of synonymous variants is predominantly determined by mutational biases rather than by strong selection acting upon nucleotide choice. Our work has important implications that extend to the interpretation of variant frequency for non-synonymous substitutions.
description: See: https://doi.org/10.1101/2021.05.12.443844
DOI: 10.5281/zenodo.5489734
title: RNA-seq data for SARS-CoV-2 infected cells

description: We performed our sequencing and analysis in CapitalBio Technology (Beijing, China). A549 cells were infected with SARS-CoV-2, panH1N1 and H7N9 at a MOI of 0.01 for 60 hr. Total RNAs from control and virus infected cells were extracted using the TRIzol reagent according to the manufacturer’s instructions (Invitrogen, USA). The genomic DNA was removed using DNase I (Takara, Japan). RNA samples were assessed for their quality using the RNA 6000 pico kit (Agilent, USA) and quantified using the ND-2000 (NanoDrop Technologies). Only the high quality RNA was selected to construct the sequencing library with the Illumina TruSeq Stranded mRNA Library Preparation kit (Illumina, USA). The NEBNext Multiplex Small RNA Library Prep Set for Illumina (NEB, USA) was used for RNA library preparation.
DOI: 10.5281/zenodo.5489733
title: RNA-seq data for SARS-CoV-2 infected cells

description: We performed our sequencing and analysis in CapitalBio Technology (Beijing, China). A549 cells were infected with SARS-CoV-2, panH1N1 and H7N9 at a MOI of 0.01 for 60 hr. Total RNAs from control and virus infected cells were extracted using the TRIzol reagent according to the manufacturer’s instructions (Invitrogen, USA). The genomic DNA was removed using DNase I (Takara, Japan). RNA samples were assessed for their quality using the RNA 6000 pico kit (Agilent, USA) and quantified using the ND-2000 (NanoDrop Technologies). Only the high quality RNA was selected to construct the sequencing library with the Illumina TruSeq Stranded mRNA Library Preparation kit (Illumina, USA). The NEBNext Multiplex Small RNA Library Prep Set for Illumina (NEB, USA) was used for RNA library preparation.
DOI: 10.5281/zenodo.5496016
title: Αξιολόγηση μαθημάτων Αθανασίου Βέρδη

description: Δεδομένα αξιολόγηση μαθημάτων ακαδημαϊκού έτους 2020-2021
DOI: 10.5281/zenodo.5413859
title: Αξιολόγηση μαθημάτων Αθανασίου Βέρδη

description: Δεδομένα αξιολόγηση μαθημάτων ακαδημαϊκού έτους 2020-2021
DOI: 10.23645/epacomptox.16589933
title: Integrating publicly available information to screen candidates for chemical prioritization under the Reauthorized Toxic Substances Control Act: A proof of concept case study using genotoxicity and carcinogenicity

description: Data and code from "Integrating publicly available information to screen candidates for chemical prioritization under the Reauthorized Toxic Substances Control Act: A proof of concept case study using genotoxicity and carcinogenicity" by Grace Patlewicz
DOI: 10.23645/epacomptox.16589933.v1
title: Integrating publicly available information to screen candidates for chemical prioritization under the Reauthorized Toxic Substances Control Act: A proof of concept case study using genotoxicity and carcinogenicity

description: Data and code from "Integrating publicly available information to screen candidates for chemical prioritization under the Reauthorized Toxic Substances Control Act: A proof of concept case study using genotoxicity and carcinogenicity" by Grace Patlewicz
DOI: 10.6084/m9.figshare.16589936
title: Meta-analysis of the 30-day mortality and operative outcomes associated with COVID-19 in orthopaedic patients - Dataset

description: Dataset contains meta-analysis data pertaining to the (1) prevalence of COVID-19, (2) its post-operative incidence and its associated: (3) 30-day rate and risk of mortality, (4) pulmonary (e.g. pneumonia, acute respiratory distress syndrome) and thromboembolic (e.g. pulmonary embolism, deep vein thrombosis) complication risk across hip fracture, mixed-elective and trauma and elective surgery cohorts. Additionally, we sought to analyse (5) patient factors (age, sex, pre-morbidity - assessed using the ASA grade) for developing COVID-19 in orthopaedic patients.<br><br><br>Please open file in Review Manager https://training.cochrane.org/online-learning/core-software-cochrane-reviews/revman
DOI: 10.6084/m9.figshare.16589936.v1
title: Meta-analysis of the 30-day mortality and operative outcomes associated with COVID-19 in orthopaedic patients - Dataset

description: Dataset contains meta-analysis data pertaining to the (1) prevalence of COVID-19, (2) its post-operative incidence and its associated: (3) 30-day rate and risk of mortality, (4) pulmonary (e.g. pneumonia, acute respiratory distress syndrome) and thromboembolic (e.g. pulmonary embolism, deep vein thrombosis) complication risk across hip fracture, mixed-elective and trauma and elective surgery cohorts. Additionally, we sought to analyse (5) patient factors (age, sex, pre-morbidity - assessed using the ASA grade) for developing COVID-19 in orthopaedic patients.<br><br><br>Please open file in Review Manager https://training.cochrane.org/online-learning/core-software-cochrane-reviews/revman
DOI: 10.5281/zenodo.4896570
title: Long-term spatially explicit information on land use 1830-1960-2015: Case study of the municipalities Waidhofen/Ybbs and Paldau, Austria

description: The dataset contains historical land use/land cover (LULC) pattern for the Austrian municipalities Waidhofen/Ybbs (Lower Austria) and Paldau (Styria). Three time cuts comprising nearly 200 years were digitized using various spatial data sources: 1820: Maps of Franciscan Cadastre 1960: Aerial photographs 2015: Aerial orthophotos combined with IACS (Integrated Administration and Control System) The dataset consistently discerns four LULC categories (forest land, cropland, grassland, and “settlement and other”) and provides additional information on biomass extraction. The following files are available: <em>README.txt</em>: Metadata and descriptions of spatial data and attributes <em>Waidhofen.zip</em>: Spatial data of Waidhofen/Ybbs, Lower Austria <em>Paldau.zip</em>: Spatial data of Paldau, Styria
description: The data was created within the Integrating Land Use Legacies in Landslide Risk Assessment to Support Spatial Panning (ILLAS) project funded by the Austrian Climate Research Program (ACRP), grant number ACRP9-ILLAS-KR16AC0K13226. The contribution of S. Gingrich was also financially supported by the European Research Council (ERC-2017-StG 757995 HEFT).
DOI: 10.5281/zenodo.5496002
title: Ammoglanis amapaensis SPAdes preassembly

description: .
DOI: 10.5281/zenodo.5496001
title: Ammoglanis amapaensis SPAdes preassembly

description: .
DOI: 10.6073/pasta/d5ce3e412551ba6064b75d6dbbfaf6b5
title: North Temperate Lakes LTER: High Frequency Water Temperature Data - Lake Mendota Pier 2006 - 2008

description: Water temperature was measured on the pier at 1 and 2 m water depth at a frequency of 1 minute.