cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4018241
title: 3D photogrammetric reconstructions of individual chickpea plants

description: 3D point clouds and meshed models of individual chickpea plants were reconstructed using photogrammetry. This dataset serves as a companion to the article “Open source 3D phenotyping of chickpea plant architecture across plant development” uploaded as a preprint to <em>BioRxiv</em> (https://doi.org/10.1101/2020.09.08.288530). <strong>Description of the dataset</strong> Individual chickpea plants were imaged using a low-cost, automated turntable and camera set up. Dense point clouds were generated in VisualSFM, these point clouds were cleaned (denoised and non-plant points removed), scaled and then meshed using a ball-pivoting algorithm. More information on the imaging and reconstruction workflow can be found in our <em>BioRxiv</em> preprint (https://doi.org/10.1101/2020.09.08.288530). Scaled, clean point clouds and meshed models are provided in this dataset. All files are in the .PLY format and can be viewed using most 3D imaging software packages, including Meshlab. Files are named using the following convention:<br> "GENOTYPE_PLANTIDNUMBER_GROUNDTRUTHINGORWEEKS_POINTCLOUDORMESHED"<br> Where:<br> GENOTYPE is the chickpea genotype.<br> PLANTIDNUMBER is the unique identifier for each plant.<br> GROUNDTRUTHINGORWEEKS refers to whether the plant was used for validation against ground truthing measurements or if growth was tracked after germination.<br> POINTCLOUDORMESHED refers to if the .ply file is a dense point cloud or a meshed 3D model. <strong>Plant material</strong> Three commercial Australian chickpea cultivars (Genesis Kalkee, PBA Hattrick and PBA Slasher) were grown in pots in a glasshouse and were imaged once per week for five weeks after germination. Three genotypes selected from local and international sources (ICC5878, SonSla and PUSA76) were grown in pots outdoors and were imaged once at five weeks post germination.
DOI: 10.25592/uhhfdm.1357
title: Supplementary Data to Dissertation Airport Capacity and Performance in Europe

description: Supplementary Data to the dissertation "Airport Capacity and Performance - A study of transport economics, service quality and sustainability" submitted to the Faculty of Business Administration (Hamburg Business School) of University of Hamburg by Branko Bubalo. Hamburg / Berlin, August 5th, 2020
DOI: 10.25592/uhhfdm.1356
title: Supplementary Data to Dissertation Airport Capacity and Performance in Europe

description: Supplementary Data to the dissertation "Airport Capacity and Performance - A study of transport economics, service quality and sustainability" submitted to the Faculty of Business Administration (Hamburg Business School) of University of Hamburg by Branko Bubalo. Hamburg / Berlin, August 5th, 2020
DOI: 10.25592/uhhfdm.1322
title: X-Ray Fluorescence and Reflectography Data from Oxford, Bodleian Library, MS Barocci 87 and Ms Barocci 177

description: XRF (ARTAX: 50kV, 600 µA, linescans of 10 points of 20s each), and reflectography (DinoLite: x50 magnification, vis, NIR and UV light) analysis of inks from Ms Barocci 87 (15th century CE) and Ms Barocci 177 (13th century CE) from the Bodleian Library, Oxford (United Kingdom). Analysis of 7 folios (12 spots on ink and spots on 6 paper) for Barocci 87, and 7 folios (15 spots on ink and 7 spots on parchment) for Barocci 177. Barocci177_report.pptx Barocci87_report.pptx Reflectography_BodleianBarocci177.zip Reflectography_BodleianBarocci87.zip XRF_BodleianBarocci177.zip XRF_BodleianBarocci87.zip
description: The research for project C06 was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) within the Sonderforschungsbereich 950 (SFB 950). The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg in collaboration with the Bundesanstalt für Materialforschung und -prüfung (BAM).
DOI: 10.25592/uhhfdm.1321
title: X-Ray Fluorescence and Reflectography Data from Oxford, Bodleian Library, MS Barocci 87 and Ms Barocci 177

description: XRF (ARTAX: 50kV, 600 µA, linescans of 10 points of 20s each), and reflectography (DinoLite: x50 magnification, vis, NIR and UV light) analysis of inks from Ms Barocci 87 (15th century CE) and Ms Barocci 177 (13th century CE) from the Bodleian Library, Oxford (United Kingdom). Analysis of 7 folios (12 spots on ink and spots on 6 paper) for Barocci 87, and 7 folios (15 spots on ink and 7 spots on parchment) for Barocci 177. Barocci177_report.pptx Barocci87_report.pptx Reflectography_BodleianBarocci177.zip Reflectography_BodleianBarocci87.zip XRF_BodleianBarocci177.zip XRF_BodleianBarocci87.zip
description: The research for project C06 was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) within the Sonderforschungsbereich 950 (SFB 950). The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg in collaboration with the Bundesanstalt für Materialforschung und -prüfung (BAM).
DOI: 10.25592/uhhfdm.1320
title: X-Ray Fluorescence and Reflectography Data from Paris, Bibliothèque Nationale de France, Ms Parisinus Coislin 330 and Ms Parisinus Graecus 1843

description: XRF (Elio: 40kV, 20 µA, spot measurements of 60s each), and reflectography (DinoLite: x50 magnification, vis, NIR and UV light) analysis of inks from BNF Parisinus Coislin 330 (11th centrury CE) & Parisinus Graecus 1843 (ca 14th century CE) from the Bibliothèque nationale de France (France). Analysis of 11 folios (37 spots on ink + 11 spots on parchment) from Parisinus Coislin 330; 18 folios (66 spots on ink + 18 spots on paper) from Parisinus Graecus 1843 Preliminary report analyses BNF Paris.docx - results & report in English Reflectography_BNFCoisl330.zip - complete reflectography Dataset for BNF Parisinus Coislin 330 Reflectography_Gr1843.zip - complete reflectography Dataset for Parisinus Graecus 1843 XRF_Coisl330.zip - complete XRF Dataset for BNF Parisinus Coislin 330 XRF_Gr1843.zip - complete XRF Dataset for BNF Parisinus Graecus 1843
description: The research for project C06 was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) within the Sonderforschungsbereich 950 (SFB 950). The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg in collaboration with the Bundesanstalt für Materialforschung und -prüfung (BAM).
DOI: 10.25592/uhhfdm.1319
title: X-Ray Fluorescence and Reflectography Data from Paris, Bibliothèque Nationale de France, Ms Parisinus Coislin 330 and Ms Parisinus Graecus 1843

description: XRF (Elio: 40kV, 20 µA, spot measurements of 60s each), and reflectography (DinoLite: x50 magnification, vis, NIR and UV light) analysis of inks from BNF Parisinus Coislin 330 (11th centrury CE) & Parisinus Graecus 1843 (ca 14th century CE) from the Bibliothèque nationale de France (France). Analysis of 11 folios (37 spots on ink + 11 spots on parchment) from Parisinus Coislin 330; 18 folios (66 spots on ink + 18 spots on paper) from Parisinus Graecus 1843 Preliminary report analyses BNF Paris.docx - results & report in English Reflectography_BNFCoisl330.zip - complete reflectography Dataset for BNF Parisinus Coislin 330 Reflectography_Gr1843.zip - complete reflectography Dataset for Parisinus Graecus 1843 XRF_Coisl330.zip - complete XRF Dataset for BNF Parisinus Coislin 330 XRF_Gr1843.zip - complete XRF Dataset for BNF Parisinus Graecus 1843
description: The research for project C06 was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) within the Sonderforschungsbereich 950 (SFB 950). The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg in collaboration with the Bundesanstalt für Materialforschung und -prüfung (BAM).
DOI: 10.25592/uhhfdm.1318
title: X-Ray Fluorescence and Relectography Data from Paris, Bibliothèque Nationale de France, Ms Lat9654

description: XRF (Elio: 40kV, 20 µA, spot measurements of 60s each), and reflectography (DinoLite: x50 magnification, vis, NIR and UV light) analysis of inks from BNF Lat9654 from the Bibliothèque nationale de France (France). Analysis of 8 folios (13 spots on ink, 10 on parchment) Reflectography_BNFLat9654.zip - complete reflectography Dataset Results_Latin9654 XRF and reflectography results XRF_BNFLat9654.zip - complete XRF Dataset XRF_Lat9654 XRF data and processing
description: The research for this study was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) within the Sonderforschungsbereich 950 (SFB 950). The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg in collaboration with the Bundesanstalt für Materialforschung und -prüfung (BAM).
DOI: 10.25592/uhhfdm.1317
title: X-Ray Fluorescence and Relectography Data from Paris, Bibliothèque Nationale de France, Ms Lat9654

description: XRF (Elio: 40kV, 20 µA, spot measurements of 60s each), and reflectography (DinoLite: x50 magnification, vis, NIR and UV light) analysis of inks from BNF Lat9654 from the Bibliothèque nationale de France (France). Analysis of 8 folios (13 spots on ink, 10 on parchment) Reflectography_BNFLat9654.zip - complete reflectography Dataset Results_Latin9654 XRF and reflectography results XRF_BNFLat9654.zip - complete XRF Dataset XRF_Lat9654 XRF data and processing
description: The research for this study was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) within the Sonderforschungsbereich 950 (SFB 950). The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg in collaboration with the Bundesanstalt für Materialforschung und -prüfung (BAM).
DOI: 10.6084/m9.figshare.12936578
title: Snares in Soysambu conservancy

description: Contains data.frame with all snares found in the Soysambu conservancy during fieldwork.Also included are spatial positions of snares found by the rangers of the conservancy, as far as GPS positions were taken (this part of the dataset is biased, because GPS positions are often not recorded; removed snares without GPS positions are not included in the dataset).
DOI: 10.25592/uhhfdm.1210
title: X-Ray Fluorescence and Reflectography Data from Paris, Bibliothèque Nationale de France, Ms Fr9084

description: XRF (Elio: 40kV, 20 µA, spot measurements of 30-60s each), and reflectography (DinoLite: x50 magnification, vis, NIR and UV light) analysis of pigments from miniatures of BNF Ms Fr9084 from the Bibliothèque nationale de France (France). Analysis of 8 folios BNF Français 9084_report.docx - report in French French9084.pptx - protocol and results Reflectography_BNF_French9084.zip - complete reflectography Dataset XRF_BNF_French9084.zip - complete XRF Dataset MSI was also performed to recover damaged writing. Link to dataset is included in related identifier.
description: The research for this study was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) within the Sonderforschungsbereich 950 (SFB 950). The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg in collaboration with the Bundesanstalt für Materialforschung und -prüfung (BAM).
description: {"references": ["http://www.theses.fr/2017PA040163"]}
DOI: 10.25592/uhhfdm.1209
title: X-Ray Fluorescence and Reflectography Data from Paris, Bibliothèque Nationale de France, Ms Fr9084

description: XRF (Elio: 40kV, 20 µA, spot measurements of 30-60s each), and reflectography (DinoLite: x50 magnification, vis, NIR and UV light) analysis of pigments from miniatures of BNF Ms Fr9084 from the Bibliothèque nationale de France (France). Analysis of 8 folios BNF Français 9084_report.docx - report in French French9084.pptx - protocol and results Reflectography_BNF_French9084.zip - complete reflectography Dataset XRF_BNF_French9084.zip - complete XRF Dataset MSI was also performed to recover damaged writing. Link to dataset is included in related identifier.
description: The research for this study was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) within the Sonderforschungsbereich 950 (SFB 950). The research was conducted within the scope of the Centre for the Study of Manuscript Cultures (CSMC) at Universität Hamburg in collaboration with the Bundesanstalt für Materialforschung und -prüfung (BAM).
description: {"references": ["http://www.theses.fr/2017PA040163"]}
DOI: 10.25592/uhhfdm.1084
title: BUSDE

description: Data from the BUSDE Project
DOI: 10.25592/uhhfdm.1083
title: BUSDE

description: Data from the BUSDE Project
DOI: 10.25592/uhhfdm.1074
title: ZISA Media

description: Additional data from the ZISA project.
DOI: 10.25592/uhhfdm.1073
title: ZISA Media

description: Additional data from the ZISA project.
DOI: 10.25592/uhhfdm.1064
title: Child-L2

description: Data from the CHILD-L2 project.
DOI: 10.25592/uhhfdm.1063
title: Child-L2

description: Data from the CHILD-L2 project.
DOI: 10.25592/uhhfdm.1055
title: 3D Model of Scytian Knife grinder

description: 3D Model of Scytian Knife grinder 3D Modell des Skytischer Messerschleifer https://www.fundus.uni-hamburg.de/de/collections/archeology Gipsabguss-Sammlung des Archäologischen Instituts der Universität Hamburg This 3D scan was made possible within the framework of the Hamburg Open Science programme by funding from the Ministry of Science, Research and Equality of the Free and Hanseatic City of Hamburg.
DOI: 10.25592/uhhfdm.1054
title: 3D Model of Scytian Knife grinder

description: 3D Model of Scytian Knife grinder 3D Modell des Skytischer Messerschleifer https://www.fundus.uni-hamburg.de/de/collections/archeology Gipsabguss-Sammlung des Archäologischen Instituts der Universität Hamburg This 3D scan was made possible within the framework of the Hamburg Open Science programme by funding from the Ministry of Science, Research and Equality of the Free and Hanseatic City of Hamburg.
DOI: 10.25592/uhhfdm.958
title: 3D-Model of a plaster cast of the so called kleine Herculanerin

description: Plaster Cast of the so called kleine Herculanerin
DOI: 10.25592/uhhfdm.957
title: 3D-Model of a plaster cast of the so called kleine Herculanerin

description: Plaster Cast of the so called kleine Herculanerin
DOI: 10.6084/m9.figshare.12936296
title: Supplementary Material for: What Shall We Do for the Patients with Shaky Leg Syndrome? A Review of 23 Patients

description: Orthostatic tremor (OT) is not an uncommon symptom in various neurodegenerative diseases. However, the nature and pathophysiology of OT involve a complex network of tremors and dopaminergic pathways. We assessed patients who complained of prominent leg tremors described as “shaky leg.” We analyzed their characteristics and evaluated them with neuroimaging and electrophysiological tools. A total of 23 patients who experienced an uncomfortable symptom of leg tremor were retrospectively enrolled from April 2014 to October 2019. Previous medical history, brain MRI, and surface electromyography (EMG) data were analyzed. The [<sup>18</sup>F]-FP-CIT brain positron emission tomography (PET) and the Unified Parkinson’s Disease Rating Scale (UPDRS) were assessed for patients who showed parkinsonism. The causes of OT varied: parkinsonism (<i>n</i> = 5), idiopathic causes (<i>n</i> = 4), secondary causes (<i>n</i> = 3, trauma, brain lesion, arteriovenous malformation), drug reactions (<i>n</i> = 3, valproate, perphenazine, haloperidol), other neurological disorders (<i>n</i> = 5, essential tremor, dystonia, restless leg syndrome, REM sleep behavior disorder, dementia), alcohol withdrawal (<i>n</i> = 1), functional movement disorder (<i>n</i> = 1), and an unknown cause (<i>n</i> = 1). The frequency range varied (2.6–15 Hz) and according to the new consensus statement on the classification of OT, 4 patients had primary OT, 2 had “primary OT plus,” 12 had slow OT, and 5 had orthostatic myoclonus. The prognosis associated with the use of medication was generally poor; however, clonazepam and levodopa were the most effective drugs. In conclusion, we found that different types of OT and orthostatic myoclonus were diagnosed by electrophysiological evaluation and neuroimaging tools even if they showed the same symptoms as “shaky leg.” In addition, it is possible to roughly estimate the response to medication according to the type of OT and the cause. To clarify the pathophysiology of OT, a large number of longitudinal cohort studies and detailed neuroimaging and electrophysiological evaluations are needed.
DOI: 10.6084/m9.figshare.12936296.v1
title: Supplementary Material for: What Shall We Do for the Patients with Shaky Leg Syndrome? A Review of 23 Patients

description: Orthostatic tremor (OT) is not an uncommon symptom in various neurodegenerative diseases. However, the nature and pathophysiology of OT involve a complex network of tremors and dopaminergic pathways. We assessed patients who complained of prominent leg tremors described as “shaky leg.” We analyzed their characteristics and evaluated them with neuroimaging and electrophysiological tools. A total of 23 patients who experienced an uncomfortable symptom of leg tremor were retrospectively enrolled from April 2014 to October 2019. Previous medical history, brain MRI, and surface electromyography (EMG) data were analyzed. The [<sup>18</sup>F]-FP-CIT brain positron emission tomography (PET) and the Unified Parkinson’s Disease Rating Scale (UPDRS) were assessed for patients who showed parkinsonism. The causes of OT varied: parkinsonism (<i>n</i> = 5), idiopathic causes (<i>n</i> = 4), secondary causes (<i>n</i> = 3, trauma, brain lesion, arteriovenous malformation), drug reactions (<i>n</i> = 3, valproate, perphenazine, haloperidol), other neurological disorders (<i>n</i> = 5, essential tremor, dystonia, restless leg syndrome, REM sleep behavior disorder, dementia), alcohol withdrawal (<i>n</i> = 1), functional movement disorder (<i>n</i> = 1), and an unknown cause (<i>n</i> = 1). The frequency range varied (2.6–15 Hz) and according to the new consensus statement on the classification of OT, 4 patients had primary OT, 2 had “primary OT plus,” 12 had slow OT, and 5 had orthostatic myoclonus. The prognosis associated with the use of medication was generally poor; however, clonazepam and levodopa were the most effective drugs. In conclusion, we found that different types of OT and orthostatic myoclonus were diagnosed by electrophysiological evaluation and neuroimaging tools even if they showed the same symptoms as “shaky leg.” In addition, it is possible to roughly estimate the response to medication according to the type of OT and the cause. To clarify the pathophysiology of OT, a large number of longitudinal cohort studies and detailed neuroimaging and electrophysiological evaluations are needed.
DOI: 10.25934/00005269.0
title: Available IPD datapackage for study 'A Phase III Randomised, Double-blind, Active-controlled Parallel Group Efficacy and Safety Study of BI 10773 Compared to Glimepiride Administered Orally During 104 Weeks With a 104 Week Extension Period in Patients With Type 2 Diabetes Mellitus and Insufficient Glycaemic Control Despite Metformin Treatment'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00005269.1
title: IPD datapackage for study 'A Phase III Randomised, Double-blind, Active-controlled Parallel Group Efficacy and Safety Study of BI 10773 Compared to Glimepiride Administered Orally During 104 Weeks With a 104 Week Extension Period in Patients With Type 2 Diabetes Mellitus and Insufficient Glycaemic Control Despite Metformin Treatment' and research request: 'Stratification of SGLT2 inhibitor glucose lowering therapy in Type 2 diabetes'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.6084/m9.figshare.12593846
title: Metadata record for: Development and validation of the CHIRTS-daily quasi-global high-resolution daily temperature data set

description: This dataset contains key characteristics about the data described in the Data Descriptor Development and validation of the CHIRTS-daily quasi-global high-resolution daily temperature data set. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> <br>
DOI: 10.6084/m9.figshare.12593846.v1
title: Metadata record for: Development and validation of the CHIRTS-daily quasi-global high-resolution daily temperature data set

description: This dataset contains key characteristics about the data described in the Data Descriptor Development and validation of the CHIRTS-daily quasi-global high-resolution daily temperature data set. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> <br>
DOI: 10.5281/zenodo.4005131
title: Binary Classification as a Phase Separation Process (data repository)

description: This is a data repository for the paper "Binary classification as a phase separation process", by Rafael Monteiro. Website with description of this project: https://rafael-a-monteiro-math.github.io/Binary_classification_phase_separation/index.html Github: https://github.com/rafael-a-monteiro-math/Binary_classification_phase_separation They contain Examples 1D toy model examples Computational statistics Several trained PSBC on MNIST dataset, with different parameter configurations Extra simulations, investigating normalization properties, low dimensional models that fail due to "too much" model compression, and comparison among ANNs, KNNs, and the PSBC in 1D If you want to know how to read the data how to access computational statistics, raw data, and examples how to use the data stored in this data repository see the guide README.pdf on GitHub page at Binary_Classification_Phase_Separation, where a script that downloads (and organizes) all this data is also available ("download_PSBC.sh). I did not include a copy of the train-test set (0-1dubset of the MNIST database) in every folder with simulations. But you can find a copy of the normalized dataset in the tar ball "PSBC_Examples.tar.gz" as data_test_normalized_MNIST.csv and data_train_normalized_MNIST.csv.
DOI: 10.34812/nr6p-2725
title: British Army Lists

description: Date range: 1839-1950
OCR quality: original OCR
File types/numbers: 488,733 ALTO XML files; 488,703 image files; 383 METS files; 383 plain text files.
This dataset covers Hart’s Army lists from 1839-1915 and the Official Army lists 1879-1950. These lists were issued monthly, quarterly and half yearly.
DOI: 10.5281/zenodo.4022122
title: Basaluminite in natural and engineered systems: Insights on As retention and its use as proxy for the acidification of high-alpine catchments

description: Raw Data containing the data used in the MSc thesis Basaluminite in natural and engineered systems: Insights on As retention and its use as proxy for the acidification of high-alpine catchments