cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.rr18v66
title: Data from: Feeding intolerance alters the gut microbiota of preterm infants

description: Feeding intolerance (FI) is a common disease in preterm infants, often
 causing a delay in individual development. Gut microbiota play an
 important role in nutrient absorption and metabolism of preterm infants.
 To date, few studies have focused on the community composition of gut
 microbiota of preterm infants with feeding intolerance. In this study, we
 collected fecal samples from 41 preterm infants diagnosed with feeding
 intolerance and 29 preterm infants without feeding intolerance, at three
 specific times during the development and prevalence of feeding
 intolerance (after birth, when feeding intolerance was diagnosed, after
 feeding intolerance was gone), from different hospitals for 16S rRNA gene
 sequencing. The gut microbiota community composition of preterm infants
 diagnosed with feeding intolerance was significantly different from that
 of preterm infants without feeding intolerance. At the time when feeding
 intolerance was diagnosed, the relative abundance of Klebsiella in preterm
 infants with feeding intolerance increased significantly, and was
 significantly higher than that of the preterm infants without feeding
 intolerance. After feeding intolerance was cured, the relative abundance
 of Klebsiella significantly decreased in the infants diagnosed with
 feeding intolerance, while the relative abundance of Klebsiella in preterm
 infants without feeding intolerance was not significantly altered during
 the development and prevalence of feeding intolerance. Furthermore, we
 verified that Klebsiella was effective in the diagnosis of feeding
 intolerance (AUC = 1) in preterm infants, suggesting that Klebsiella is a
 potential diagnostic biomarker for feeding intolerance.
description: The supplement files of
 this study.supplement
 files.zip
DOI: 10.5061/dryad.6jk8416
title: Data from: Diversity patterns of non-mammalian cynodonts (Synapsida, Therapsida) and the impact of taxonomic practice and research history on diversity estimates

description: Non-mammalian cynodonts represent a speciose and ecologically diverse
 group with a fossil record stretching from the late Permian until the
 Cretaceous. Because of their role as major components of Triassic
 terrestrial ecosystems and as the direct ancestors of mammals, cynodonts
 are an important group for understanding Mesozoic tetrapod diversity. We
 examine patterns of non-mammalian cynodont species richness and the
 quality of their fossil record. A supertree of cynodonts is constructed
 from recently published trees and time-calibrated using a Bayesian
 approach. While this approach pushes the root of Cynodontia back to the
 earliest Guadalupian, the origins of Cynognathia and Probainognathia are
 close to their first appearance in the fossil record. Taxic, subsampled
 and phylogenetic diversity estimates support a major cynodont radiation
 following the end-Permian mass extinction, but conflicting signals are
 observed at the end of the Triassic. The taxic diversity estimate shows
 high diversity in the Rhaetian and a drop across the Triassic/Jurassic
 boundary, while the phylogenetic diversity indicates an earlier extinction
 between the Norian and Rhaetian. The difference is attributed to the
 prevalence of taxa based solely on teeth in the Rhaetian, which are not
 included in the phylogenetic diversity estimate. Examining the
 completeness of cynodont specimens through geological time does not
 support a decrease in preservation potential; although the median
 completeness score decreases in the Late Triassic, the range of values
 remains consistent. Instead, the poor completeness scores are attributed
 to a shift in sampling and taxonomic practices: an increased prevalence in
 microvertebrate sampling and the naming of fragmentary material.
description: Supplementary Data
 1Completeness scores,
 first and last appearences, number of specimens and skull lengths (mm) of
 the cynodont species included in this studySupplementary Data
 2Source trees used to
 create the supertreeSupplementary Data
 3R
 object ("hedmans") containing all 100 time calibrated
 phylogenies.Supplementary Data
 4Characters used to
 assign percentages to skeletal regions. Characters on the same row are
 deemed to be identical or non-independentSupplementary Data
 5Percentage score
 assigned to each skeletal regionSupplementary Data
 6Kendall's Tau and p
 values of correlations between skull length and completeness, using all
 100 trees to calculate phylogenetic independent
 contrasts
DOI: 10.5281/zenodo.17762766
title: INRIM_Brand1_25F_1_23C_0k_EDLC_single

description: MetSuperCap Project Dataset 25 F SC sample 1 INRIM   - EDLC Single - Brand1

Part of the Constant Temperature DataBase
DOI: 10.5281/zenodo.17762767
title: INRIM_Brand1_25F_1_23C_0k_EDLC_single

description: MetSuperCap Project Dataset 25 F SC sample 1 INRIM   - EDLC Single - Brand1

Part of the Constant Temperature DataBase
DOI: 10.5061/dryad.d9j09bm
title: Data from: Reconstructing the geography of speciation from contemporary biodiversity data

description: Inferring the geographic mode of speciation could help reveal the
 evolutionary and ecological mechanisms that underlie the generation of
 biodiversity. Comparative methods have sought to reconstruct the
 geographic speciation history of clades using data on phylogeny and
 species’ geographic ranges. However, inference from comparative methods
 has been limited by uncertainty over whether contemporary biodiversity
 data retain the historic signal of speciation. We constructed a
 process-based simulation model to determine the influence of speciation
 mode and post-speciation range evolution on current biodiversity patterns.
 The simulations suggest that the signal of speciation history remains
 detectable in species distributions and phylogeny, even when species
 ranges have evolved substantially through time. We extracted this signal
 using a combination of summary statistics that had good power to
 distinguish speciation modes, then used these statistics to infer the
 speciation history of 30 plant and animal clades. The results point to
 broad taxonomic patterns in the modes of speciation, with strongest
 support for founder speciation in mammals and birds, and strongest support
 for sympatric speciation in plants. Our model and analyses show that
 broad-scale comparative methods can be a powerful complementary approach
 to more focused genomic analyses in the study of the patterns and
 mechanisms of speciation.
description: supplemental
 fileR
 Code and vignette to perform simulations described in
 paper.Data Table
 ASummary statistics
 derived for 30 empirical datasets used for estimating speciation
 mode.Data Table
 BModel parameters and
 derived summary statistics for simulated dataset
DOI: 10.5281/zenodo.18389838
title: STYLISTIC PROBLEMS IN TRANSLATING WORKS OF WORLD LITERATURE INTO THE UZBEK LANGUAGE

description: This study examines the stylistic pressures and opportunities that arise when translating canonical and contemporary world literature into Uzbek. I focus on preserving authorial voice while securing idiomatic readability, cultural resonance, and performability. Through an integrated framework—spanning agglutinative morphology, flexible word order, honorific and politeness systems, and prosodic habits—I map how Uzbek resources interact with source-text markers such as register, focalization, metaphor and idiom, rhythm and meter, and genre norms along the domestication–foreignization continuum. The article contributes a six-part method: a cross-lingual inventory of stylistic parameters; genre-specific heuristics for prose, poetry, and drama; strategies for cultural allusions and pragmatics; a quality-control workflow; case-style tactics; and a practical classroom/professional toolkit. The overarching goal is to minimize stylistic loss and reconstruct an equivalent aesthetic effect for Uzbek readers while maintaining pedagogical and performative value.
DOI: 10.5281/zenodo.18389839
title: STYLISTIC PROBLEMS IN TRANSLATING WORKS OF WORLD LITERATURE INTO THE UZBEK LANGUAGE

description: This study examines the stylistic pressures and opportunities that arise when translating canonical and contemporary world literature into Uzbek. I focus on preserving authorial voice while securing idiomatic readability, cultural resonance, and performability. Through an integrated framework—spanning agglutinative morphology, flexible word order, honorific and politeness systems, and prosodic habits—I map how Uzbek resources interact with source-text markers such as register, focalization, metaphor and idiom, rhythm and meter, and genre norms along the domestication–foreignization continuum. The article contributes a six-part method: a cross-lingual inventory of stylistic parameters; genre-specific heuristics for prose, poetry, and drama; strategies for cultural allusions and pragmatics; a quality-control workflow; case-style tactics; and a practical classroom/professional toolkit. The overarching goal is to minimize stylistic loss and reconstruct an equivalent aesthetic effect for Uzbek readers while maintaining pedagogical and performative value.
DOI: 10.5061/dryad.n1h9d0d
title: Data from: Heterogeneity in efflux pump expression predisposes antibiotic-resistant cells to mutation

description: Antibiotic resistance is often the result of mutations that block drug
 activity; however, bacteria also evade antibiotics by transiently
 expressing genes such as multidrug efflux pumps. A crucial question is
 whether transient resistance can promote permanent genetic changes.
 Previous studies have established that antibiotic treatment can select
 tolerant cells that then mutate to achieve permanent resistance. Whether
 these mutations result from antibiotic stress or preexist within the
 population is unclear. To address this question, we focused on the
 multidrug pump AcrAB-TolC. Using time-lapse microscopy, we found that
 cells with higher acrAB expression have lower expression of the DNA
 mismatch repair gene mutS, lower growth rates, and higher mutation
 frequencies. Thus, transient antibiotic resistance from elevated acrAB
 expression can promote spontaneous mutations within single cells.
description: ElMeouche_Dunlop
DOI: 10.5061/dryad.689110r
title: Data from: Deciphering the drivers of negative species-genetic diversity correlation in Alpine amphibians

description: The evolutionary and ecological importance of neutral and adaptive genetic
 diversity is widely recognized. Nevertheless, genetic diversity is rarely
 assessed for conservation planning, which often implicitly assumes a
 positive correlation between species and genetic diversity. Multiple
 drivers can cause the co-variation between the genetic diversity of one
 species and the richness of the whole communities, and explicit tests are
 needed to identify the processes that can determine species-genetic
 diversity correlations (SGDC). Here we tested whether intrapopulation
 genetic diversity (at neutral loci) and species richness co-vary in the
 amphibian communities of a southern Alpine region (Trentino, Italy), using
 the common frog (Rana temporaria) as focal species for the study of
 genetic diversity. We also analyzed ecological similarity, niche overlap
 and interspecific interactions between the species, to unravel the
 processes determining SGDC. The neutral genetic diversity of common frogs
 was negatively related to species richness. The negative SGDC was probably
 due to an opposite influence of environmental gradients on the two levels
 of biodiversity, since the focal species and the other amphibians differ
 in ecological preferences, particularly in terms of thermal optimum.
 Conversely, we did not find evidence for a role of interspecific
 interactions in the negative SGDC. Our findings stress that species
 richness cannot be used as a universal proxy for genetic diversity, and
 only combining SGDC with analyses on the determinants of biodiversity can
 allow to identify the processes determining the relationships between
 genetic and species diversity.
description: Rana_temporaria_12lociMicrosatellite data for the common frog (Rana temporaria) in Genepop formatamphibian_occurrencesAmphibian distributional dataset used in MaxEnt modeling and niche overlap analyses (regional dataset: Trentino (Italy); coordinate system: lat/long WGS84).environmental_variablesEnvironmental variables used in SEM, MaxEnt modeling and niche overlap analyses (raster files: mean annual temperature, annual precipitation, anthropized areas, coniferous forests, broad-leaved forest, water areas, geological substrate, slope; shapefile: roads network; coordinate system: lat/long WGS84).
DOI: 10.5281/zenodo.18385928
title: CARMINE-T2.4: Hazard indicators assessed with existing data and codes
title: HMD and SPEI Indices from EMO1 - D2.1

description: Hazard indicators assessed with existing data over CARMINE project pilot sites: climate hazard indicators and codes.
DOI: 10.5281/zenodo.18389810
title: Datasets for precipitation nowcasting
DOI: 10.5061/dryad.8540192
title: Data from: Embryonal life histories: desiccation plasticity and diapause in the Argentinean pearlfish Austrolebias bellottii

description: Embryos of annual killifish diapause in soil egg banks while ponds are
 dry. Their rates of development and survival in different developmental
 stages determine the numbers and stages of embryos at rewetting. In the
 Argentinean pearlfish Austrolebias bellottii, we investigated plasticity
 for desiccation in such embryonal life history components across phases of
 mild desiccation and rewetting and also effects of life history on
 hatching. In comparison to non-annuals, our data suggest that incidences
 of diapause have become relatively independent of the occurrence of
 desiccation, as if they have become genetically assimilated. We found
 limited survival effects of desiccation, limited developmental delays and
 an acceleration of development into the pre-hatching stage. This response
 can be adaptive when desiccation informs that an opportunity to hatch
 approaches. Embryos arrest development in the pre-hatching stage (diapause
 DIII) or in the dispersed-cell phase (diapause DI). Parental pair
 variation in rates of development and survival in the earliest
 developmental stages affects the fraction of embryos that are in DI at
 rewetting and the number surviving. Given such effects on life history
 fitness components, rates during embryonal development seem
 "visible" to selection and the developmental system can thus
 adapt when pair variation contains a heritable component. In agreement
 with expectations for the presence of diversified bet-hedging, some
 embryos hatched and others not in over half of the clutches with several
 developed embryos at the moment of rewetting. Hatching probabilities
 increased for eggs produced later in the experiment, and they increased
 when embryos were rewetted a second time after two months. This response
 is opposite of what is expected when age-dependent hatching would be
 adapted to exploit opportunities for completing another generation before
 the dry season.
description: timedepsurvival18Sept2018Text file containing data values for the analysis of embryonal survival in different stages. Please consult the R script "survivalscript19Sept2018.Rhistory" for explanations and an example.survivalscript19Sept2018R script for survival analysis. With explanations of the data file "timedepsurvival18Sept2018.txt"timedepdevelopmentSept2018Data file with intervals for the analysis of developmental rates. Variable names and an example can be found in "developmentscript19Sept2018.Rhistory".developmentscript19Sept2018R script with explanations of variable names in "timedepdevelopmentSept2018.txt" and an example of Cox mixed model fitting.atrewettingdata19Septhatchingdata20Sept2018Data on hatching probabilities.secondhatching20Sept2018Data on hatching probabilities at second rewetting
DOI: 10.5281/zenodo.18389809
title: Datasets for precipitation nowcasting
DOI: 10.5061/dryad.72cg113
title: Data from: Multiple chromosomal rearrangements in a hybrid zone between Littorina saxatilis ecotypes

description: Both classical and recent studies suggest that chromosomal inversion
 polymorphisms are important in adaptation and speciation. However, biases
 in discovery and reporting of inversions make it difficult to assess their
 prevalence and biological importance. Here, we use an approach based on
 linkage disequilibrium among markers genotyped for samples collected
 across a transect between contrasting habitats to detect chromosomal
 rearrangements de novo. We report 17 polymorphic rearrangements in a
 single locality for the coastal marine snail, Littorina saxatilis.
 Patterns of diversity in the field and of recombination in controlled
 crosses provide strong evidence that at least the majority of these
 rearrangements are inversions. Most show clinal changes in frequency
 between habitats, suggestive of divergent selection, but only one appears
 to be fixed for different arrangements in the two habitats. Consistent
 with widespread evidence for balancing selection on inversion
 polymorphisms, we argue that a combination of heterosis and divergent
 selection can explain the observed patterns and should be considered in
 other systems spanning environmental gradients.
description: Faria_et_al_Wavefamilies_filtered_GT_FORMATGenotypes of the Wave families.
DOI: 10.5061/dryad.cr5h595
title: Data from: Aquatic insects rich in omega-3 fatty acids drive breeding success in a widespread bird

description: Ecologists studying bird foraging ecology have generally focused on food
 quantity over quality. Emerging work suggests that food quality, in terms
 of highly unsaturated omega-3 fatty acids (HUFA), can have equally
 important effects on performance. HUFA, which are present in aquatic
 primary producers, are all but absent in vascular plants, and HUFA content
 is also correspondingly higher in aquatic insects. Here, we show that Tree
 Swallow (Tachycineta bicolor) chicks rapidly accumulate HUFA from food
 during the nestling period. Using data sampled over 24 years, we also show
 that Tree Swallow breeding success is positively associated with the
 availability of HUFA-rich aquatic insects. Variation in aquatic insect
 biomass during chick development was a strong predictor of fledging
 success, while variation in terrestrial insects had little effect on
 fledging success. Our results highlight the potential for nutritional
 mismatches between insectivores and high-quality prey to affect avian
 reproductive performance.
description: longTermInsectAnalysis_DRYADrMarkdown file for the supplemental materials and the analysismerged_insects_DRYADnest and insect abundance data for analysis
DOI: 10.5061/dryad.cb51t54
title: Data from: Validation of a non-invasive method for the early detection of metabolic syndrome: a diagnostic accuracy test in a working population

description: Objectives. A non-invasive method for the early detection of Metabolic
 Syndrome (NIN-MetS) using only Waist to Height Ratio (WHtR) and Blood
 Pressure (BP) has recently been published, with fixed cut-off values for
 gender and age. The aim of this study was to validate this method in a
 large sample of Spanish workers. Design. A diagnostic test accuracy to
 assess the validity of the method was performed. Setting. Occupational
 Health Services. Participants. The studies were conducted in 2012-2016 on
 a sample of 60,799 workers from the Balearic Islands (Spain).
 Interventions. The NCEP-ATP III criteria were used as the gold standard.
 NIM-MetS has been devised using classification trees (the CHAID,
 Chi-squared Automatic Interaction Detection method). Main outcome
 measures. Anthropometric and biochemical variables to diagnose MetS.
 Sensitivity, specificity, validity index and Youden Index were determined
 to analyse the accuracy of the diagnostic test (NIM-MetS). Results.
 Regarding the validation of the method, sensitivity was 54.7%, specificity
 94.9% and validity index 91.2%. The cut-off value for WHtR was 0.54,
 ranging from 0.51 (lower age group) to 0.56 (higher) in the age groups.
 Variables more closely associated with MetS were WHtR (AUC=0.85; 95% CI:
 0.84-0.86) and Systolic Blood Pressure (AUC=0.79; 95% CI: 0.78-0.80). The
 final cut-off values for the non-invasive method were WHtR≥0.56 and
 BP≥128/80 mmHg, which includes four levels of MetS risk (very low, low,
 moderate and high). Conclusions. The analysed method has shown a high
 validity index (higher than 91%) for the early detection of MetS. It is a
 non-invasive method easy to apply and interpret in any health care
 setting. This method provides a scale of MetS risk which allows a more
 accurate detection and a more effective intervention.
description: Validation
 NIM-MetS
DOI: 10.15468/dl.53s65e
title: Occurrence Download

description: A dataset containing 130 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Morocco",
 "OccurrenceStatus is Present",
 "TaxonKey is Opuntia"
 ]
}

 The dataset includes 130 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001556-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.q62rb2p
title: Data from: Evaluation of plant contamination in metabarcoding diet analysis of a herbivore

description: Fecal DNA metabarcoding is currently used in various fields of ecology to
 determine animal diets. Contamination of non-food DNA from complex field
 environments is a considerable challenge to the reliability of this method
 but has rarely been quantified. We evaluated plant DNA contamination by
 sequencing the chloroplast trnL P6 loop region from food-controlled geese
 feces. The average percentage of contaminant sequences per sample was
 1.86%. According to the results of generalized linear models, the
 probability of contamination was highest in samples placed in wet soil.
 The proportion of contaminant sequences was lowest at the earliest
 sampling point and was slightly higher in samples placed in open
 conditions. Exclusion of rare OTUs (operational taxonomic units) was
 effective for obtaining reliable dietary data from the obtained sequences,
 and a 1% cutoff reduced the percentage of contaminated samples to less
 than 30%. However, appropriate interpretation of the barcoding results
 considering inevitable contamination is an important issue to address. We
 suggest the following procedures for fecal sampling and sequence data
 treatment to increase the reliability of DNA metabarcoding diet analyses:
 (i) Collect samples as soon as possible after deposition, (ii) avoid
 samples from deposits on wet soil, and (iii) exclude rare OTUs from diet
 composition estimations.
description: Sequences of detected
 OTUsFASTA file of OTU
 sequences detected from control and experimetal fecal
 samples.OTUs.fastaFASTQ files of each sampleFASTQ files of each sample separated by MID tags. Filtering of low quality sequences and/or sequence errors are not conducted for these files.Sample_FASTQ.zip
DOI: 10.15468/dl.brbsbc
title: Occurrence Download

description: A dataset containing 279 species occurrences available in GBIF matching the query:
{
 "PublishingOrg" : [
 "is 6ea659fb-0611-4afb-98af-2010b6ddeedb"
 ]
}

 The dataset includes 279 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001558-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.