cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15472/iz5a38
title: Ictiofauna asociada a los manglares de Bahía Solano - Chocó, 2010

description: Los manglares son el ecosistema costero dominante en el Pacífico colombiano; estás áreas son claves para el sostenimiento de la fauna y flora, y para el desarrollo de las poblaciones humanas que se establecen en ellas. La situación de la estructura ecológica de los manglares para el pacifico Chocoano no está bien documentada y son muy pocos y superficiales los estudios que se han hecho. Con el objetivo de Definir y orientar participativamente la elaboración de técnicas para la gestión integral de ecosistemas de manglar en los municipios de Bahía Solano y Bajo Baudó, levantando información básica sobre las condiciones biofísicas y socioeconómicas del área de manglar y, los niveles de presión humana, conociendo información de la comunidad local sobre los procesos y usos de los del ecosistema e identificando las áreas críticas y aplicando la zonificación de estos ecosistema se formula el plan de manejo integral y participativo de los ecosistemas de manglar de estos dos entes territoriales para establecer un conocimiento básico sobre su situación actual en la costa pacífica chocoana. Se desarrollaron caracterizaciones florísticas en las que las especies más representativas fueron: Lagunculaeria racemosa, Conocarpus erectas, Mora megitosperma, Pelliciera rhizophorae y Rhizophora mangle. En el caso de Bajo Baudó, aunque las poblaciones de mangle presentan diferencias marcadas en la estructura poblacional, estas están en muy buen estado de desarrollo en términos generales; El corte de latizales y arboles representativos para la obtención de varas y construcción de viviendas puede ser un factor de riesgo de estos manglares, principalmente en Pizarro y Usaragá. La menor intervención antrópica hace de Sibirú una zona propicia para la conservación de este sistema. En cuanto al municipio de Bahía Solano, la alta contaminación por residuos sólidos y líquidos, la expansión de la frontera agrícola y la invasión urbanística han destruido en más del 60% el ecosistema de manglar de Ciudad Mutis. La situación es bastante crítica ya que toda su superficie ha sido alterada y deteriorada con una disminución dramática de sus componentes florísticos y faunísticos, lo que le da a la zona un aspecto desértico que dificulta la restauración y la regeneración natural de estas áreas que tienen un grado de deterioro muy serio. Debido a esto toda la cobertura de bosque de manglar de Ciudad Mutis se zonifica como un área que debe entrar a una inminente restauración. El presente documento contiene el diagnóstico florístico y faunístico de la zona de manglar de los municipio de Bajo Baudó y Bahía Solano en la costa pacífica Chocoana; la caracterización socioeconómica de las poblaciones; la zonificación de los ecosistemas de manglar y la formulación de las actividades o lineamientos del plan de manejo integral y participativo para la conservación, preservación y recuperación de estos ecosistemas.
DOI: 10.17632/9zwdxhrvst.1
title: Liver Soluble Epoxide Hydrolase Regulates Behavioral and Cellular Effects of Chronic Stress. Xi-He Qin et al.

description: Using RNA sequencing (RNA-seq), we found that hepatic arachidonic acid metabolism pathway, especially epoxyeicosatrienoic acids (EETs) signaling, was specifically altered following chronic mild stress (CMS) paradigm, a validated animal model employed to study the psychopathology of stress-related disorders including depression. Datasets include the unmodified gel and microscopy images for each figure, as well as all original data files generated by raw reads for RNA-seq.
DOI: 10.17632/g3b94w99c9.2
title: DATA OF: ABSOLUTE COST ADVANTAGE AND SECTORAL COMPETITIVENESS: EMPIRICAL EVIDENCE FROM NAFTA AND THE EUROPEAN UNION
DOI: 10.17632/pngct7c5pd.3
title: From relativistic time dilation to psychological time perception - Scripts

description: Matlab scripts to generate the figures and the results.
DOI: 10.15468/i8k15n
title: Hydrochus spanglerorum n. sp., a remarkable, highly derived species from Brazil Guyana, and Suriname (Coleoptera: Hydrochidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Perkins, Philip D. (2019): Hydrochus spanglerorum n. sp., a remarkable, highly derived species from Brazil Guyana, and Suriname (Coleoptera: Hydrochidae). Zootaxa 4701 (6): 581-587, DOI: https://doi.org/10.11646/zootaxa.4701.6.7
DOI: 10.17632/867g6wxs2y.2
title: microplastics

description: This data set contains the 1) information of sampling sites in the South China Sea and western pacific, 2) abundances and component of microplastics from seawater, 3) instrumental parameters for GC/MS analysis, 4) 7 PAH concentrations from these water columns, 4) comparison of our results with the literature.
DOI: 10.17632/bv2xp48dtp.2
title: Ideal profile of dietary essential amino acids for pacu (Piaractus mesopotamicus) juveniles by deletion method

description: Diets with balanced essential amino acid (EAA) proportions improve the feed utilization and reduce the high nitrogen excretion by the animal, minimizing the environmental impacts on the production and increase the profitability of the aquaculture production systems. The deletion method allows the establishment of an ideal relationship among the EAA in a single experiment by using the same diet, environment and fish lot, resulting in a greater uniformity and data consistency. In addition to determining the ideal profile of essential amino acids for pacu, this study may help to consolidate and further improve the deletion method using different aquatic species.
DOI: 10.17632/pw92vvj9rz.1
title: Raw cross-linked files

description: Raw cross-linked files for insoluble aggregates collected from SY5Y-WT, SY5Y-APP(SW), and SY5Y-APP(SW)+Aspirin;
DOI: 10.17632/rp5k5j3s6z.1
title: Regional divisions of Mars Odyssey Gamma-Ray Spectrometer chemical maps and Dust Cover Index.

description: Derived Data products from Mars Odyssey Gamma-Ray Spectrometer derived chemical maps and Dust Cover Index. 5 degree by 5 degree normalized maps of Al, Ca, Cl, Fe, H2O, K, S, Si, Th, and DCI.
DOI: 10.17632/6x59x7x3ny.2
title: Dataset on tip vortex formation noise produced by wall-mounted finite airfoils with flat and rounded tip geometries

description: This dataset consists of measurements of tip vortex formation noise produced by finite-length airfoils with flat and rounded tips. These data were obtained using the specialist aeroacoustic test facilities at the Brandenburg University of Technology (BTU) in Cottbus, Germany and a 47-channel planar microphone array. Over 1200 unique test cases with variations in airfoil profile shape, tip geometry, angle of attack and Reynolds number were measured during the experimental campaign. The dataset contains one-third-octave band tip noise spectra that have been processed using Acoular, a Python module for acoustic beamforming.
DOI: 10.17632/rwzhhy9649.1
title: PPEF2 opposes PINK1-mediated mitochondrial quality control by dephosphorylating ubiquitin. Wall et al.

description: Original western blots and microscopy images used in: https://doi.org/10.1016/j.celrep.2019.10.130
DOI: 10.17632/sy58zbv3s2.2
title: DAISIE objects used for the global analysis of island birds

description: DAISIE R objects including the required data for running DAISIE maximum likelihood analyses as presented in Valente et al. Nature. The main dataset is D1. The other datasets are those used in the sensitivity analyses. (Luis Valente, Albert B. Phillimore, Martim Melo, Ben H. Warren, Sonya M. Clegg, Katja Havenstein, Ralph Tiedemann, Juan Carlos Illera, Christophe Thébaud, Tina Aschenbach, Rampal S. Etienne. A simple dynamic model explains island bird diversity worldwide. Nature).
DOI: 10.17632/d7vrhdkgcd.1
title: Data for: Short-term and Long-term Behavioral and Physiological Effects of Falun Gong Qigong on Hemispheric Processing of Attention and Emotion

description: While neuroscience has described several hemispheric and interhemispheric differences in meditators (e.g., Davidson et al., 2003; Fox et al., 2014; Luders et al., 2012), there has been little recent work investigating how these differences influence behavior from a laterality perspective. In this data, experienced practitioners and novices of the Falun Gong qigong practice (a form of meditation) performed the Emotion Lateralized Attention Network Task (ELANT) (Crump et al., 2013) both before and after a session of the Falun Gong exercises. This version of the LANT incorporated cartoon faces with happy, neutral, or angry emotions as spatial cues. The data also contains resting heart rate variability (HRV) taken both before and after the Falun Gong exercises.
DOI: 10.12751/g-node.d76994
title: Dataset of simultaneous scalp EEG and intracranial EEG recordings and human medial temporal lobe units during a verbal working memory task

description: We present an electrophysiological dataset recorded from nine subjects during a verbal working memory task. Subjects were epilepsy patients undergoing intracranial monitoring for localization of epileptic seizures. Subjects performed a modified Sternberg task in which the encoding of memory items, maintenance, and recall were temporally separated. The dataset includes simultaneously recorded scalp EEG with the 10-20 system, intracranial EEG (iEEG) recorded with depth electrodes, waveforms and spike times of 1526 units recorded in the medial temporal lobe, and the MNI coordinates and anatomical labels of all intracranial electrodes. Subject characteristics and information on sessions (set size, match/mismatch, correct/incorrect, response, response time for each trial) are also provided. This dataset enables the investigation of working memory by providing simultaneous scalp EEG and iEEG recordings, which can be used for connectivity analysis, alongside hard to obtain unit recordings from humans.
description: IsSupplementTo: Boran E, Fedele T, Klaver P, Hilfiker P, Stieglitz L, Grunwald T, Sarnthein J. Persistent hippocampal neural firing and hippocampal-cortical coupling predict verbal working memory load. Sci Adv 2019;5(3):eaav3687. http://doi.org/10.1126/sciadv.aav3687
DOI: 10.15468/1bmfa8
title: A new synonym and distribution record in the genus Ceiupaba Martins & Galileo 1998 (Coleoptera, Cerambycidae, Lamiinae, Desmiphorini)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Bezark, Larry G., Nascimento, Francisco E. De L. (2019): A new synonym and distribution record in the genus Ceiupaba Martins & Galileo 1998 (Coleoptera, Cerambycidae, Lamiinae, Desmiphorini). Zootaxa 4701 (6): 591-593, DOI: https://doi.org/10.11646/zootaxa.4701.6.9
DOI: 10.15468/wamxfr
title: Redescription of Liopropoma aragai (Teleostei: Serranidae), with two new confirmed records of species of Liopropoma from Taiwan

description: This dataset contains the digitized treatments in Plazi based on the original journal volume Koeda, Keita, Senou, Hiroshi, Chang, Chih-Wei, Ho, Hsuan-Ching (2019): Redescription of Liopropoma aragai (Teleostei: Serranidae), with two new confirmed records of species of Liopropoma from Taiwan. Zootaxa 4702 (1), DOI: https://doi.org/10.11646/zootaxa.4702.1.11
DOI: 10.15468/7rfzuy
title: A new stargazer, Ichthyscopus pollicaris (Perciformes: Uranoscopidae), from East Asia

description: This dataset contains the digitized treatments in Plazi based on the original journal article Vilasri, Veera, Ho, Hsuan-Ching, Kawai, Toshio, Gomon, Martin F. (2019): A new stargazer, Ichthyscopus pollicaris (Perciformes: Uranoscopidae), from East Asia. Zootaxa 4702 (1): 49-59, DOI: https://doi.org/10.11646/zootaxa.4702.1.10
DOI: 10.15468/xqci22
title: A new Malthopsis batfish from Taiwan, with comments on Malthopsis tiarella Jordan, 1902 (Lophiiformes: Ogcocephalidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ho, Hsuan-Ching, Koeda, Keita (2019): A new Malthopsis batfish from Taiwan, with comments on Malthopsis tiarella Jordan, 1902 (Lophiiformes: Ogcocephalidae). Zootaxa 4702 (1): 73-86, DOI: https://doi.org/10.11646/zootaxa.4702.1.12
DOI: 10.5281/zenodo.3546211
title: cimr references

description: Reference panels used in cimr processing. The original files were downloaded and parsed from the dir links in the format of 'ftp://ftp.ncbi.nlm.nih.gov/snp/organisms/human_9606_' + [snp build and genome reference build ids] + '/database/organism_data/'
DOI: 10.5281/zenodo.3546210
title: cimr references

description: Reference panels used in cimr processing. The original files were downloaded and parsed from the dir links in the format of 'ftp://ftp.ncbi.nlm.nih.gov/snp/organisms/human_9606_' + [snp build and genome reference build ids] + '/database/organism_data/'
DOI: 10.15468/myq8le
title: An unexpected distribution record of the cold water fish Pholis fangi (Pholidae) from southern Taiwan

description: This dataset contains the digitized treatments in Plazi based on the original journal article Koeda, Keita, Muto, Nozomu (2019): An unexpected distribution record of the cold water fish Pholis fangi (Pholidae) from southern Taiwan. Zootaxa 4702 (1): 87-93, DOI: https://doi.org/10.11646/zootaxa.4702.1.13
DOI: 10.5281/zenodo.3563461
title: Raman data for "A coralline alga gains tolerance to ocean acidification over multiple generations of exposure"

description: This file contains the Raman data and code for "A coralline alga gains tolerance to ocean acidification over multiple generations of exposure" by Cornwall et al. in Nature Climate Change. Run the file, "run.R" in R to reproduce the analysis. Please see the published paper for methods and details (doi will be provided here when it becomes available).
DOI: 10.7910/dvn/jgufk7/nigz9k
title: crosswalk_documentation.pdf

description: :unav
DOI: 10.15468/erwpe2
title: A new Portholefish of the genus Diplophos (Stomiiformes: Gonostomatidae) from the western Pacific Ocean

description: This dataset contains the digitized treatments in Plazi based on the original journal article Koeda, Keita, Ho, Hsuan-Ching (2019): A new Portholefish of the genus Diplophos (Stomiiformes: Gonostomatidae) from the western Pacific Ocean. Zootaxa 4702 (1): 107-113, DOI: https://doi.org/10.11646/zootaxa.4702.1.15
DOI: 10.15468/m8qvvs
title: Review of the genus Eustomias (Stomiiformes: Stomiidae: Melanostomiinae) of Taiwan, with descriptions of three new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Koeda, Keita, Ho, Hsuan-Ching (2019): Review of the genus Eustomias (Stomiiformes: Stomiidae: Melanostomiinae) of Taiwan, with descriptions of three new species. Zootaxa 4702 (1): 94-106, DOI: https://doi.org/10.11646/zootaxa.4702.1.14
DOI: 10.7910/dvn/jgufk7/yay6d9
title: cps_crosswalk_plus.tab

description: :unav
DOI: 10.15468/kfu7qz
title: The barracudina genera Lestidium and Lestrolepis of Taiwan, with descriptions of two new species (Aulopiformes: Paralepididae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ho, Hsuan-Ching, Tsai, Song-Yu, Li, Hsing-Hui (2019): The barracudina genera Lestidium and Lestrolepis of Taiwan, with descriptions of two new species (Aulopiformes: Paralepididae). Zootaxa 4702 (1): 114-139, DOI: https://doi.org/10.11646/zootaxa.4702.1.16
DOI: 10.17632/jp8mzsd8rp.1
title: Data for: Colour and Tropospheric Cloud Structure of Jupiter from MUSE/VLT: Retrieving a Universal Chromophore

description: We provide three separate .csv files that contain the supplementary material requested by Reviewer 1. An explanation of the contents of each file is given in the file description.
DOI: 10.25919/5de850a1d2172
title: 3D Mineral mapping of Queensland - Version 2 ASTER and related geoscience products

description: The digital 3-dimenional (3D) mineral mapping suite of Queensland comprises ~20 “standardized” products at the spectral resolution of the ASTER (Advanced Space-borne Thermal Emission and Reflection Radiometer) sensor and generated from publicly-available satellite, airborne, field and drill core spectral data spanning the visible near infrared (VNIR; 0.4 to 1.0 µm), shortwave infrared (SWIR; 1.0 to 2.5 µm) and thermal infrared (TIR; 7.5 to 12.0 µm) wavelength regions, including: 1. Satellite ASTER maps at both 30 m and 90 m pixel resolution with complete coverage of the state of Queensland, i.e. 1.853 million km²; 2. Airborne HyMap maps at ~5 m pixel resolution with a coverage of ~25,000 km2 from areas across north Queensland; 3. Field point samples (~300) from the National Geochemical Survey of Australia (NGSA) collected from a depth of 0-10 cm of flood overbank sediments; 4. Drill-core profiles (~20) of the National Virtual Core Library (NVCL) selected from the area around the Georgetown seismic line (07GA-IG2). Key to the processing of the remote sensing data-sets (ASTER and HyMap) was the implementation of unmixing methods to remove the effects dry and green vegetation. This unmixing was not applied to the Australian ASTER geoscience maps released in 2012 (called here Version 1 or V1) resulting in extensive areas with little/no mineral information because of the need to apply masks. The vegetation unmixing methods used in the Version 2 (V2) processing of the ASTER and HyMap imagery has resulted in very few areas without coherent mineral information. The resultant V2 “mineral group” products were designed to measure mineral information potentially useful for mapping: (i) primary rock composition; (ii) superimposed alteration effects; and (iii) regolith cover. These V2 products may assist in mapping soil properties and groundwater conditions. However their relatively low spectral resolution (based on ASTER’s 14 VNIR-SWIR-TIR bands) means that they do not provide the high level of mineralogical detail available from hyperspectral systems (&gt;100 spectral bands), like HyMap and the HyLogger. Nevertheless, the relatively low spectral resolution of ASTER means that all other sensor data can be spectrally resampled to that resolution. Furthermore, the ASTER global data archive, which now spans entire Earth’s land surface &lt;80degrees latitude, means that it can be used as global base-map for integrating all other spectral data.
DOI: 10.5281/zenodo.3563171
title: Nanopore long reads enable the first complete genome assembly of a Malaysian Vibrio parahaemolyticus isolate bearing the pVa plasmid associated with acute hepatopancreatic necrosis disease

description: Supplemental File 1: Main genome assemblies (Unpolished Flye assembly, Polished Flye assembly, Unicycler Hybrid Assembly and Unicycler Illumina-only assembly) generated in this study for comparison and their BUSCO output. Supplemental File 2: Phyre2 protein modelling output of the putative MVP1 TcdA toxin Supplemental File 3: Phyre2 protein modelling output of the putative MVP1 TcdB toxin Supplemental File 4: Phyre2 protein modelling output of the putative MVP1 TccC toxin Supplemental File 5: InterProScan output of the NCBI-predicted MVP1 proteome. Supplemental Table 1: NCBI BlastN output using the <em>fuc</em> genes of <em>Vibrio parahaemolyticus</em> MVP1 as the query to search against the Vibrio reference WGS database as of 21 Oct 2019
DOI: 10.15468/oyckme
title: Two new species of the genus Ophichthus from the western central Pacific Ocean with a redescription of Ophichthus megalops Asano, 1987 (Anguilliformes Ophichthidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hibino, Yusuke, Chiu, Yung-Chieh, Chen, Hong-Ming, Shao, Kwang-Tsao (2019): Two new species of the genus Ophichthus from the western central Pacific Ocean with a redescription of Ophichthus megalops Asano, 1987 (Anguilliformes Ophichthidae). Zootaxa 4702 (1): 140-154, DOI: https://doi.org/10.11646/zootaxa.4702.1.17
DOI: 10.24431/rw1k336
title: Developing a Euphausiid biomass time series for the central Gulf of Alaska continental shelf, June 2003, 2005, 2011 and 2013

description: In this study, we identified euphausiid (krill) backscatter using relative frequency response and targeted trawling, and created an annual index of abundance for euphausiids. Four years of AT and bottom-trawl survey data (June-August 2003, 2005, 2011, and 2013) were available from consistently sampled areas around Kodiak Island, including Shelikof Strait, Barnabas Trough, and Chiniak Trough. These data were collected during summer acoustic-trawl (AT) surveys conducted by NOAA’s Alaska Fisheries Science Center aboard the NOAA ships Oscar Dyson or Miller Freeman using standard acoustic survey techniques (Simmonds and MacLennan 2005). In the eastern Bering Sea, a time series of euphausiid biomass was developed using data from acoustic-trawl surveys of walleye pollock that are regularly conducted by NOAA Fisheries, Alaska Fisheries Science Center. Data are presented as two CSV files: NPRB_1208_data_bylatlon.csv NPRB_1208_data_byyear.csv
DOI: 10.5281/zenodo.3563460
title: Raman data for "A coralline alga gains tolerance to ocean acidification over multiple generations of exposure"

description: This file contains the Raman data and code for "A coralline alga gains tolerance to ocean acidification over multiple generations of exposure" by Cornwall et al. in Nature Climate Change. Run the file, "run.R" in R to reproduce the analysis. Please see the published paper for methods and details (doi will be provided here when it becomes available).
DOI: 10.17632/j7mmhvds5c.1
title: Data for: Using Completeness and Defaunation Indices to Understand Nature Reserve’s Key Attributes in Preserving Medium- and Large-bodied Mammals

description: Presence/absence data, body mass, trophic guilds and protection status of medium- and large-bodied mammals in the 33 studied nature reserves of Sichuan Province
DOI: 10.5281/zenodo.3563177
title: Chronos-inputs

description: Test inputs to use in Chronos FPGA Acceleration Framework
DOI: 10.5281/zenodo.3563178
title: Chronos-inputs

description: Test inputs to use in Chronos FPGA Acceleration Framework
DOI: 10.5281/zenodo.3563466
title: NPL Sample dataset scanned with Yxlon FF35 CT

description: Dataset contrains three scans of the reference sample provided by NPL within the AdvanCT project. All three scans are performed with different conditions to provide variations. Voltage: 170kV and 180kV, respectively Current: 35 and 30µA, respectively Filter: 1 and 1.5mm Cu, respectively Current: 35 and 30 µA, respectively Focus detector distance: 900 mm Focus object distance: 450 mm Projections: 1440, TIFF, 2146x1762<br> For the exact parameters, compare this list to the file name.
DOI: 10.5281/zenodo.3563467
title: NPL Sample dataset scanned with Yxlon FF35 CT

description: Dataset contrains three scans of the reference sample provided by NPL within the AdvanCT project. All three scans are performed with different conditions to provide variations. Voltage: 170kV and 180kV, respectively Current: 35 and 30µA, respectively Filter: 1 and 1.5mm Cu, respectively Current: 35 and 30 µA, respectively Focus detector distance: 900 mm Focus object distance: 450 mm Projections: 1440, TIFF, 2146x1762<br> For the exact parameters, compare this list to the file name.
DOI: 10.5281/zenodo.3563190
title: Chronos-baselines

description: The baseline CPU implementations that were used to evaluate Chronos performance.
DOI: 10.5281/zenodo.3563191
title: Chronos-baselines

description: The baseline CPU implementations that were used to evaluate Chronos performance.
DOI: 10.7910/dvn/lojywu/tnyaim
title: anthromes_v1.zip

description: ESRI ArcInfo Grid (binary)