cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.8875/1
title: Simulations

description: ZIP file containing the source code (written in C) for the three main simulations used in the paper (two-locus hitchhiking simulation; three-locus simulation with neutral locus; multi-locus simulation).
DOI: 10.5061/dryad.8880/1
title: CostData
DOI: 10.5061/dryad.7898/1
title: SSR_Data_11905036MEC-08-0315.R1

description: This data was collected in two geographical locations:  Riske Creek, British Columbia and Waterton Lakes National Park, Alberta.The data represent 14 microsatellite loci.  See Ally et al. 2008 for a description of the SSRs.Any loci that did not amplify are indicated with an question mark.
DOI: 10.5061/dryad.7898/2
title: Riske_Creek_sizedata

description: See the README_SIZEDATA file
DOI: 10.5061/dryad.7898/3
title: RR_SizeData

description: See README_SIZEDATA File
DOI: 10.5061/dryad.8645/1
title: Grace&Shaw2011Evolution_dryad

description: This file contains the entire set of raw data used to generate the results reported in the Evolution article. These data include complete phonotaxis results for each female and detailed song measurements for each male. These data span three years of sampling from wild-caught individuals plus the second-generation lab-reared offspring for one of those years. File consists of 3 data sheets: one with all of the female phonotaxis data (sheet 1), one with all of the male song data (sheet 2), and one with a description/brief explanation of column headings for both the other sheets (sheet 3, but rearranged to appear as the leftmost tab).
DOI: 10.5061/dryad.8764/2
title: Benesh_etal_dryad_species_avgs
DOI: 10.5061/dryad.8891/8
title: Trichoderma_harzianum_combined_matrix

description: Trichoderma agg. harzianum - Nexus file, aligned, concatenated datasets: ITS, tef-1, and gpd loci.
DOI: 10.5061/dryad.8727/1
title: Half-Sib Data

description: This data is from a half-sibling breeding experiment done in the lab using Gryllus firmus females at 7 days of age.  All masses are dry masses.  Energy values were calculated as described in King et al. 2010.   Column headings are: Animal: individual number, Sire: male parent number, Dam: female parent number, Bucket: cage number, Wing Morph: long-wing (L), short wing (S), Food: Low, Medium (Med), Ad libitum (AD), State of DLM (0=histolyzed, 1=partially histolyzed, 2=intact), DLM Mass (mg), Ovary Mass (mg), Remaining Mass (Body mass-DLM and Ovary Mass), Acquisition (total energy content, J), DLM Energy (J), Ovary Energy (J).
DOI: 10.5061/dryad.8735/1
title: Tobler_etal_gillmorphometrics

description: Gill morphometric data for fish from sulfidic and non-sulfidic habitats, including total gill filament number (TFN), average filament length (AFL), total gill filament length (TGFL), total hemibranch perimeter (THP), total hemibranch area (THA), and body mass (M).
DOI: 10.5061/dryad.8882/1
title: AmNat52448_FigureA2Newick.txt

description: This is the tree of Figure A2 (ML analysis including all Cox1 haplotypes) in newick format. See the corresponding pdf file (AmNat52448_FigureA2.pdf) for more information on taxon names and localities.
DOI: 10.5061/dryad.8882/2
title: AmNat52448_FigureA2.pdf

description: Maximum likelihood cox1 tree including all sequenced individuals from 15 islands and two mainland regions and depicting the entities that were delimited by the GMYC model. The newick format is provided as a separate file ('AmNat52448_FigureA2Newick.tre').
DOI: 10.5061/dryad.8882/3
title: AmNat52448_TableA4.pdf

description: List of the entities (clusters and singletons) delimited by the GMYC model for each genus, per island and mainland area. The GMYC clusters, with their corresponding capital letters, are also shown on the tree Figure A2 ('AmNat52448_FigureA2.pdf').
DOI: 10.5061/dryad.8882/4
title: AmNat52448_TableA3.pdf

description: Incidence-based species richness estimators for the tenebrionid communities of 15 central Aegean islands.
DOI: 10.5061/dryad.8268/1
title: Sequence assembly
DOI: 10.5061/dryad.8268/2
title: Microsatellite list

description: List of contigs / isotigs containing microsatellite motifs (perfect di-, tri- and tetranucleotide repeats with a minimum length of five repeat units).
DOI: 10.5061/dryad.8606/1
title: KellerEtAl_MicrosatelliteGenotypes
DOI: 10.5061/dryad.8714/1
title: descriptive statistics of microsatellite loci

description: full list of descriptive statistics for the seven microsatellite loci
DOI: 10.5061/dryad.8735/3
title: Tobler_etal_tolerance

description: Sulfide tolerance in Poecilia mexicana and P. sulphuraria from sulfidic and non-sulfidic habitats.
DOI: 10.5061/dryad.8764/1
title: Benesh_etal_dryad_full_dataset
DOI: 10.5061/dryad.8908/1
title: Trawl survey data Rockall Scotland 1986 2008

description: Trawl survey data for Rockall plateau and west coast of scotland between depths of 90-250 m. See 'read me' sheet in file for further details.
DOI: 10.5061/dryad.8061/1
title: HulseyBJLS2011

description: Table 2. Morphometrics of AM mass and Eye Size for the North American cyprinid fish examined. The standard length (SL) and Head length (HL) of fish are given.  The mass of the AM1, AM2, and AM3 are given. The eye depth (ED), eye width (EW), and eye height (EH), as well as the calculated eye volume (EV) are also given. The species are placed in order of decreasing HL adjusted eye volumes.
DOI: 10.5061/dryad.8573/1
title: AFLP data for four species of yellow-rumped warblers

description: AFLP data collected by polyacrylamide gel electrophoresis on a LiCor 4300 analyzer, and scored manually using Saga software. Samples were collected during the breeding season throughout the range of the species complex in 2001-2007; all individuals in the AFLP dataset are male.
DOI: 10.5061/dryad.8735/2
title: Tobler_etal_bodymorphometrics

description: Landmark coordinates for Poecilia mexicana and Poecilia sulphuraria from sulfidic and non-sulfidic habitats
DOI: 10.5061/dryad.8913/23
title: Brownie rag1 input file for females

description: Brownie rag1 input file for females
DOI: 10.5061/dryad.8913/24
title: Brownie rag1 input file for males

description: Brownie rag1 input file for males
DOI: 10.5061/dryad.8332/1
title: Online Appendix 1

description: **Note: A corrected version of this file was added on 2011-03-23 and can be found at http://dx.doi.org/10.5061/dryad.8332/3. Character 9 (telo-centro 1;5), incorrectly included as an autapomorphy for Tragelaphus imberbis, has been removed in the corrected Online Appendix 1 thus reducing the number of characters to 155.** Character matrix used in the present study. Autapomorphies are in red, hemiplasies in pink, homoplasies in green, synapomorphies in blue, and ambiguous characters in grey.
DOI: 10.5061/dryad.8631/1
title: Tschirren_TLR2sequences

description: DNA sequences of the entire coding region of the Toll-like receptor 2 (TLR2) gene of Myodes glareolus, Myodes rutilus, Myodes smithii, Myodes andersoni, Myodes rufocanus, Myodes rex, Chionomys nivalis, Microtus agrestis, Microtus arvalis, Microtus oeconomus, Arvicola amphibius, Apodemus alpicola, Apodemus flavicollis, Apodemus sylvaticus, Micromys minutus, Mus musculus, Rattus norvegicus
DOI: 10.5061/dryad.8872/1
title: Sexual Selection in Males
DOI: 10.5061/dryad.8872/2
title: Sexual Selection in Females
DOI: 10.5061/dryad.8913/2
title: RAG1 sequences

description: Rag1 nexus file used for MrBayes
DOI: 10.5061/dryad.8913/21
title: Brownie mtDNA input file for females

description: Brownie mtDNA input file for females
DOI: 10.5061/dryad.8913/22
title: Brownie mtDNA input file for males

description: Brownie mtDNA input file for males
DOI: 10.5061/dryad.8913/27
title: OUCH rag1 input file for females

description: OUCH rag1 input file for females
DOI: 10.5061/dryad.8913/30
title: RAG1 tree

description: Consensus topology recovered from MrBayes analysis of RAG1 sequences
DOI: 10.5441/001/0000002
title: HomingPigeonsOlfaction
DOI: 10.5061/dryad.8332/3
title: Corrected Online Appendix 1

description: **Note: this is corrected version of the character matrix file.** Character matrix used in the present study. Autapomorphies are in red, hemiplasies in pink, homoplasies in green, synapomorphies in blue, and ambiguous characters in grey.
DOI: 10.5061/dryad.8910/1
title: Archive

description: all 8 data files compressed.
DOI: 10.5061/dryad.8913/25
title: OUCH mtDNA input file for females

description: OUCH mtDNA input file for females
DOI: 10.5061/dryad.8913/26
title: OUCH mtDNA input file for males

description: OUCH mtDNA input file for males
DOI: 10.5061/dryad.8913/28
title: OUCH rag1 input file for males

description: OUCH rag1 input file for males
DOI: 10.5061/dryad.8913/29
title: MtDNA tree

description: Consensus topology recovered from MrBayes analysis of unique mtDNA sequences
DOI: 10.5061/dryad.8949/1
title: R function(s) and data

description: R functions and data to perform all analyses from paper
DOI: 10.5061/dryad.2003/1
title: Louse populations at high and low humidity levels

description: This file contains the population sizes of the two species of lice, C. macrourae3 and C. baculoides at the high and low humidity treatments in a captive animal experiment.
DOI: 10.5061/dryad.2003/2
title: Populations of C. macrourae3 alone and sharing a host

description: This file and the next file contain the population size data for the tests for the presence of competition between either louse species alone compared to sharing the host.  The data has been split into a file for C. macrourae3 and one for C. baculoides data.
DOI: 10.5061/dryad.2003/3
title: Populations of C. baculoides alone and sharing a host

description: This file and the previous file contain the population size data for the tests for the presence of competition between either louse species alone compared to sharing the host.  The data has been split into a file for C. macrourae3 and one for C. baculoides data.
DOI: 10.5061/dryad.8210/2
title: InheritanceProbability

description: File used to calculate inheritance probability of subordinate purple-crowned fairy-wrens when opposite sex breeders disappeared, in relation to the relatedness between the subordinate and remaining breeder.
DOI: 10.5061/dryad.8951/1
title: Supplemental Table S1

description: Sequences of the primers used for diagnostic PCRs, Southern blotting, and qPCR.
DOI: 10.5061/dryad.8210/1
title: FeedingRates

description: File used for the analyses of feeding rates by subordinates purple-crowned fairy-wrens.
DOI: 10.5061/dryad.8951/2
title: Supplemental Table S2

description: Results of diagnostic PCRs with 44 different transgenic N. attenuata lines.
DOI: 10.5284/1000114
title: National Ice Age Network

description: The National Ice Age Network expanded and built upon the success of The Shotton Project, a Midlands Ice Age network, funded by the ALSF in 2003/2004. It focuses on the Pleistocene (Ice Age) remains to be found in England's sand and gravel quarries. These remains include sediments and their contained flora and fauna relating to the past environments of the Ice Age, together with the archaeological evidence for some of the country's earliest human inhabitants. Although a resource of great importance for science and education, and of widespread public interest (e.g. mammoths, Neanderthals, climate change), these remains have often not received the attention devoted to the environmental and archaeological evidence for later periods.
DOI: 10.5284/1000132
title: Cottam A: a Romano-British and Anglian Settlement in East Yorkshire

description: This archive concerns excavations and associated field-walking and metal-detecting at the site known as Cottam A. Here, a Romano-British ladder settlement, to the north-west of the present-day Cottam Grange Farm, became the renewed focus of activity in the Anglian period. Files available for download include text reports, spreadsheet data, magnetometry data and a searchable set of artefact images for coins and metalwork objects.
DOI: 10.5284/1000163
title: An Imperial Frontier and its Landscape: the Gorgan and Tammisha Walls in North-East Iran

description: This project looked at the results of fieldwork/geophysics carried out at as part of the An Imperial Frontier and its Landscape: the Gorgan and Tammisha Walls in North-East Iran project.
DOI: 10.5284/1000175
title: Cowlam: Anglian Settlement in East Yorkshire

description: This archive concerns an evaluation at Church Farm, Cowlam, by M. Hummler, J.D. Richards and S.P. Roskams undertaken as part of a University of York student training programme. Files available to download consist of textual reports, spreadsheet data relating to finds and photographs of coins and metalwork.
DOI: 10.4125/pd0001th
title: A Synthesis of 1-Lithiated Glycals and 1-Tributylstannyl Glycals from 1-Phenylsulfinyl Glycals via Sulfoxide-Lithium Ligand Exchange

description: 1-Lithiated glycals generated by reaction of 1-phenylsulfinyl glycals with either t-BuLi or PhLi are transformed to 1-tributylstannyl glycals on reaction with tributyltin chloride.
DOI: 10.4125/pd0002th
title: Copper-Catalyzed Aromatic C-H Bond Halogenation Using Lithium Halides as Halogenating Reagents

description: The copper-catalyzed C-H halogenation of 2-aryl­pyridines containing a variety of electron-withdrawing and electron-donating substituents was described. It is worth noting that cheap and easy-to-handle
lithium halides were utilized as the halogen sources.
DOI: 10.4125/pd0003th
title: An Efficient Synthesis of 2-Aminofuran-3-carbonitriles via Cascade Stetter-γ-Ketonitrile Cyclization Reaction Catalyzed by N-Heterocyclic Carbene

description: An efficient method for the synthesis of 4,5-disubstituted 2-aminofuran-3-carbonitriles via a cascade Stetter-γ-ketonitrile ­cyclization reaction of aromatic aldehydes with acylidenemalono­nitriles, catalyzed by N-heterocyclic carbenes, has been developed. This procedure provides the corresponding products in moderate to high yields under mild conditions.
DOI: 10.4125/pd0004th
title: N-Heterocyclic Carbene Catalyzed Vinylogous Aldol Reaction of 2-(Trimethylsilyloxy)furan and Aldehydes

description: A N-Heterocyclic carbenes (NHC) catalyzed vinylogous aldol reaction between 2-(trimethylsilyloxy)furan and aldehydes has been developed, providing γ-substituted butenolides in high yields with
good diastereoselectivities. Furthermore, the catalyst loading can be reduced to 1 mol%.
DOI: 10.4125/pd0005th
title: 2-Benzothiazolyl Propargyl Sulfides:
Versatile Precursors for Enantiopure Allenes, E-α,β-Unsaturated Ketones
and Z-Sulfonylalkenes

description: A novel, stereospecific route to allenes is described. The approach
proceeds via a retro-ene reaction, initiated by lithium aluminium
hydride mediated cleavage of benzothiazole from the respective (chiral)
2-benzothiazolyl propargyl sulfone precursors. As such, allenes
in up to 92% yield are formed under evolution of sulfur
dioxide at ambient temperature. Furthermore, a new and mild way
to generate E-α,β-unsaturated
ketones has been discovered. These substrates are formed in around
50% yield by treating 2-benzothiazolyl propargyl sulfides
with hydrogen peroxide and a catalytic amount of ammonium molybdate
at room temperature. In the course of this research it was also
found that treatment of 2-benzothiazolyl propargyl sulfones with
sodium borohydride led to reduction of the triple bond exclusively
to the Z-double bond.
DOI: 10.4125/pd0006th
title: Titanium-Catalyzed Cyclopropanation
of Boc-Protected Cyanohydrins: A Short Access to Aminocyclopropanecarboxylic
Acid Derivatives

description: The preparation of protected 1-aminocyclopropanecarboxylic acid
was performed from readily available and inexpensive starting materials,
using titanium-catalyzed cyclopropanation as the key step. As an
extension of this methodology, a diastereoselective synthesis of
the cis-2-vinyl-substituted analogue
is presented.
DOI: 10.4125/pd0007th
title: A Formal Synthesis of Ionomycin
Featuring a Permanganate-Mediated Oxidative Cyclisation

description: Key steps in a synthesis of the C17-C32 fragment of
iono­mycin are (a) an auxiliary-directed oxidative cyclisation
of a diene with potassium permanganate to construct a tetrahydrofuran
ring and four stereogenic centres in a single operation, and (b)
a chain-appendage reaction featuring the alkylation of an enolsilane
by an oxocarbenium ion generated from a 2-phenylsulfonyl-substituted tetrahydrofuran.
DOI: 10.4125/pd0008th
title: Efficient Iron/Copper-Cocatalyzed
O-Arylation of Phenols with Bromoarenes

description: Low catalytic amount CuI and Fe(acac)3 were found
to effectively promote the C-O cross-coupling reaction
in the presence of K2CO3 as the base. A serious
of diaryl ethers with different substitutents can be synthesized
in good to excellent yields. This efficient and economic method
is attractive for applications on an industrial scale.
DOI: 10.4125/pd0009th
title: Copper-Catalyzed Aromatic C-H
Bond Halogenation Using Lithium Halides as Halogenating Reagents

description: The copper-catalyzed C-H halogenation of 2-aryl­pyridines
containing a variety of electron-withdrawing and electron-donating
substituents was described. It is worth noting that cheap and easy-to-handle
lithium halides were utilized as the halogen sources.
DOI: 10.4125/pd0010th
title: An Efficient Synthesis of 2-Aminofuran-3-carbonitriles
via Cascade Stetter-γ-Ketonitrile Cyclization
Reaction Catalyzed by N-Heterocyclic
Carbene

description: An efficient method for the synthesis of 4,5-disubstituted 2-aminofuran-3-carbonitriles
via a cascade Stetter-γ-ketonitrile ­cyclization
reaction of aromatic aldehydes with acylidenemalono­nitriles,
catalyzed by N-heterocyclic carbenes, has been developed. This procedure
provides the corresponding products in moderate to high yields under
mild conditions.
DOI: 10.4125/pd0011th
title: Enantioselective Brønsted
Acid Catalysis in the Friedel-Crafts Reaction of Indoles
with Secondary ortho-Hydroxybenzylic
Alcohols

description: The reaction of indole and various methyl-substituted indoles
with the title compounds was studied in the presence of chiral phosphoric
acids, which act as Brønsted acid catalysts. While yields were
generally high (&gt;90%), significant enantioselectivities
(up to 77% ee) were only achieved for certain substrate-catalyst
combinations. In addition, a kinetic resolution of the starting
material was observed, which led to an enrichment of one chiral
alcohol to up to 68% ee after 76% conversion.
The Friedel-Crafts reaction is not stereospecific (no direct
SN2-type substitution), but rather is likely to proceed
via a cation, which is bound to the chiral Brønsted acid or
its anion in a close contact ion pair.
DOI: 10.4125/pd0012th
title: A Novel Catalyst-Free
Tandem Reaction for the Synthesis of 5-Hydroxy-1,5-dihydro-2H-pyrrol-2-ones in Water Medium

description: A novel catalyst-free, water-medium, tandem reaction for the
synthesis of 5-hydroxy-1,5-dihydro-2H-pyrrol-2-ones
was developed through a one-pot strategy from nitroethylenes and
1,3-dicarbonyl compounds. A series of 1-aryl-2-nitroethenes and
1-nitroalk-1-enes were surveyed to determine the scope of this tandem reaction
with moderate to good yield.
DOI: 10.4125/pd0013th
title: Lithium Dibenzylamide, a Simple,
Selective and Highly Efficient Catalyst for Isocyanate Cyclotrimerization
to Isocyanurate

description: Lithium dibenzylamide catalyzed the rapid and essentially quantitative
cyclotrimerization of a variety of isocyanates under mild conditions
and could be recycled for six times in high yield.
DOI: 10.4125/pd0014th
title: Synthesis of 2,3,4,11b-Tetrahydro-1H-pyridazino[6,1-a]isoquinolines via the Three-Component
Reaction of 2-Alkynylbenzaldehydes, a Sulfonohydrazide and Dimethyl
Cyclopropane-1,1-dicarboxylate

description: A three-component reaction of 2-alkynylbenzaldehydes, a sulfonohydrazide
and dimethyl cyclopropane-1,1-dicarboxylate, co-catalyzed by silver(I)
triflate and nickel(II) perchlorate hexahydrate, is described, which
affords 2,3,4,11b-tetrahydro-1H-pyridazino[6,1-a]isoquinolines in moderate
to good yields. A possible reaction pathway that proceeds via a
tandem 6-endo-cyclization and [3+3] cycloaddition
sequence is proposed.
DOI: 10.6084/m9.figshare.12765407.v6
title: Real time history of wave parameters in Black Sea based on wave buoy measurements

description: Dataset of mean wave parameters registered every 30 min by spotter wave buoy (https://www.sofarocean.com/products/spotter) installed in Black Sea region near Gelendzhik city (Russia) on water depth about 80 m and about 4 nautical miles from the shore (LAT 44.51<sup>0</sup> LON 37.97<sup>0</sup>). The buoy was installed at 23 July 2020 in the frame of integrated coastal-marine scientific expedition "Black Sea - 2020" of Shirshov Institute of Oceanology (State assignments 149-2019-0005 and 149-2019-0014). The dataset provide weekly upgraded time history (Epoch Time) of wave parameters from this date up to now. Following wave parameters are available: Significant Wave Height (m),Peak Period (s),Mean Period (s),Peak Direction (deg),Peak Directional Spread (deg),Mean Direction (deg),Mean Directional Spread (deg),Latitude (deg),Longitude (deg). Also there are calculated real time estimations of Wind Speed (m/s) and Wind Direction (deg) (https://www.sofarocean.com/posts/wind-spotter). The data are in columns separated by commas, a symbol “-“ means no data. Some notes on data quality. Data such as they are transmitted by the buoy without additional selection. Sometimes there are spikes of the wave period (about 14-20 s) associated with the recording of ship waves in the presence of small wind waves (significant waves up to 40 cm high). Sometimes there are significant spikes of the height of significant waves associated with the fact that curious sailors and fishermen can raise a buoy on board the ship to see what it is. On 27 August 2020, the buoy was torn away by a strong current and re-installed at the same location on 3 September 2020.
DOI: 10.5286/isis.e.rb2070006
title: Partial order of conduction electrons in Mn3CoSi

description: Recently, we discovered a new partial order in Mn3RhSi by using HiFi and ARGUS at ISIS. In order to study the partial order state, we propose to measure initial asymmetry of the family compound Mn3CoSi with a larger bandwidth than that of Mn3RhSi. Based on the result, we would like to reveal the band-width dependence of the partial order in a phase diagram of the hyperkagome spin network system.
DOI: 10.5286/isis.e.rb2070006-1
title: Partial order of conduction electrons in Mn3CoSi

description: Recently, we discovered a new partial order in Mn3RhSi by using HiFi and ARGUS at ISIS. In order to study the partial order state, we propose to measure initial asymmetry of the family compound Mn3CoSi with a larger bandwidth than that of Mn3RhSi. Based on the result, we would like to reveal the band-width dependence of the partial order in a phase diagram of the hyperkagome spin network system.
DOI: 10.5286/isis.e.rb2070009
title: Investigations of ion diffusion in a cathode of secondary battery LiFePO4/rGO

description: To improve the electrochemical performance of LiFePO4 (LFP) as a cathode battery material, one way is by mixed the LFP with electronically conductive materials like carbon. We have prepared the LFP sample mixed by carbon rGO. The composition of the mixture are varied as follows: LFP:rGO (a. 100%:0%; b. 90%:10%; c. 80%:20%; d. 67%:33%). We obtained that the addition of rGO into the LFP sample significantly improves its electrical conductivity. For further plans, the investigation of Li+ ion diffusion using muSR is also prominent since the diffusion of Li+ is a basic principle behind the operation of Li-ion batteries. Both values of electrical conductivity and diffusion coefficient of Li+ are the main issues for battery application in industry. In this proposal, a series of ZF, wTF=30 G as well as LF=5 G and 10 G are planned to be measured in the temperature range between 50 and 300 K.