cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7819346.v1
title: Spraying 6-BA could alleviate the harmful impacts of waterlogging on dry matter accumulation and grain yield of wheat

description: <b>Fig. 1. </b>Daily sunshine duration, daily average temperature and daily rainfall during the wheat growth seasons at experimental station from 2011 to 2013. <b>Fig. 2. </b>Rainfall in ten days of each month during the whole wheat season from Jingzhou Weather Station from 1983 to 2012. <b>Fig. 3.</b> The effect of different treatments on the dry matter accumulation at maturity<b></b> <b>Fig. 4. </b>The effect of different treatments on photosynthetic rate from flag leaf after booting stage <b>Fig. 5.</b> The effect of different treatments on MDA content in flag leaf (a, c) and the third leaf from top (b,d) at 25 DAA (2011-2012 and 2012-2013).<b>Table 1.</b> The nutrient statuses of soil in the top 20 cm layer.<b>Table 2.</b> Effect of different treatments on grain yield, kernel number per spike and 1000 kernel weight.
DOI: 10.6084/m9.figshare.7819343.v1
title: Influence of groundwater table fluctuation on the transport of volatile organic contaminants in the vadose zone.xlsx

description: These data contain information about the influence of groundwater table fluctuation on the transport of VOCs from groundwater to the atmosphere.
DOI: 10.6084/m9.figshare.7819361.v1
title: Untitled Item

description: Age-related Changes of Macular Ganglion Cell-Inner Plexiform Layer Thickness in Korean elderly subjects
DOI: 10.6084/m9.figshare.7819361.v2
title: Age-related Changes of Macular Ganglion Cell-Inner Plexiform Layer Thickness in Korean elderly subjects

description: Age-related Changes of Macular Ganglion Cell-Inner Plexiform Layer Thickness in Korean elderly subjects
DOI: 10.6084/m9.figshare.7819361.v3
title: Age-related Changes of Macular Ganglion Cell-Inner Plexiform Layer Thickness in Korean elderly subjects

description: Age-related Changes of Macular Ganglion Cell-Inner Plexiform Layer Thickness in Korean elderly subjects
DOI: 10.6084/m9.figshare.7819232
title: Additional file 1: of Tropism and molecular pathogenesis of canine distemper virus

description: Table S1. GenBank accession numbers of all isolates used to construct Fig. 2. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7819232.v1
title: Additional file 1: of Tropism and molecular pathogenesis of canine distemper virus

description: Table S1. GenBank accession numbers of all isolates used to construct Fig. 2. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7819226
title: Additional file 7: of Systemic distribution of medullary bone in the avian skeleton: ground truthing criteria for the identification of reproductive tissues in extinct Avemetatarsalia

description: Table S5. List of ÎźCT scans used in the present study. All ÎźCT scans are available in the MorphoSource repository, under the project # P640 at https://www.morphosource.org/Detail/ProjectDetail/Show/project_id/640 [89]. (XLS 60 kb)
DOI: 10.6084/m9.figshare.7819226.v1
title: Additional file 7: of Systemic distribution of medullary bone in the avian skeleton: ground truthing criteria for the identification of reproductive tissues in extinct Avemetatarsalia

description: Table S5. List of ÎźCT scans used in the present study. All ÎźCT scans are available in the MorphoSource repository, under the project # P640 at https://www.morphosource.org/Detail/ProjectDetail/Show/project_id/640 [89]. (XLS 60 kb)
DOI: 10.6084/m9.figshare.7819229
title: Additional file 8: of Systemic distribution of medullary bone in the avian skeleton: ground truthing criteria for the identification of reproductive tissues in extinct Avemetatarsalia

description: Table S6. Subsample of specimens used for destructive analyses (petrographic and paraffin thin-sections, and chemical staining). (XLS 32 kb)
DOI: 10.6084/m9.figshare.7819229.v1
title: Additional file 8: of Systemic distribution of medullary bone in the avian skeleton: ground truthing criteria for the identification of reproductive tissues in extinct Avemetatarsalia

description: Table S6. Subsample of specimens used for destructive analyses (petrographic and paraffin thin-sections, and chemical staining). (XLS 32 kb)
DOI: 10.6084/m9.figshare.7819214
title: MOESM8 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 8: Table S6. LTR nucleotide alignment. LTR alignment for phylogenetic analysis using LTRs from a total of 19 proviruses and 142 solo LTRs, provided in fasta format.
DOI: 10.6084/m9.figshare.7819214.v1
title: MOESM8 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 8: Table S6. LTR nucleotide alignment. LTR alignment for phylogenetic analysis using LTRs from a total of 19 proviruses and 142 solo LTRs, provided in fasta format.
DOI: 10.6084/m9.figshare.7819205
title: MOESM7 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 7: Table S5. Genotypes and inferred allele frequencies. Raw genotypes obtained across 332 resequenced samples for 56 non-reference and 89 reference insertions are provided in vcf format. Allele frequencies were calculated from raw genotypes per canid species or sub-population, as indicated above each column. Non-genotyped sites are noted with an â -â .
DOI: 10.6084/m9.figshare.7819211
title: Additional file 5: of Systemic distribution of medullary bone in the avian skeleton: ground truthing criteria for the identification of reproductive tissues in extinct Avemetatarsalia

description: Table S4. Comparison of candling [43] and ÎźCT data (the present study) for selected specimens. All specimens are from the Texas Vertebrate Paleontology Collections, University of Texas, Jackson School Museum of Earth History, Austin, TX (TMM). The presence (â ) or absence (X) of MB was recorded in different elements / regions of the bird skeleton. Conflicting results are highlighted in red. (XLS 37 kb)
DOI: 10.6084/m9.figshare.7819211.v1
title: Additional file 5: of Systemic distribution of medullary bone in the avian skeleton: ground truthing criteria for the identification of reproductive tissues in extinct Avemetatarsalia

description: Table S4. Comparison of candling [43] and ÎźCT data (the present study) for selected specimens. All specimens are from the Texas Vertebrate Paleontology Collections, University of Texas, Jackson School Museum of Earth History, Austin, TX (TMM). The presence (â ) or absence (X) of MB was recorded in different elements / regions of the bird skeleton. Conflicting results are highlighted in red. (XLS 37 kb)
DOI: 10.6084/m9.figshare.7819202
title: Additional file 4: of Systemic distribution of medullary bone in the avian skeleton: ground truthing criteria for the identification of reproductive tissues in extinct Avemetatarsalia

description: Table S3. Comparison of the distributions of MB and pneumaticity in the stylopod of all studied specimens. The presence (â ) or absence (X) of osteological pneumatic features on the proximal epiphyses of the humerus and femur was recorded for each sampled specimen and confronted to the dataset on the presence (â ) or absence (X) of MB in these elements. Conflicting results are highlighted in red. (XLS 52 kb)
DOI: 10.6084/m9.figshare.7819205.v1
title: MOESM7 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 7: Table S5. Genotypes and inferred allele frequencies. Raw genotypes obtained across 332 resequenced samples for 56 non-reference and 89 reference insertions are provided in vcf format. Allele frequencies were calculated from raw genotypes per canid species or sub-population, as indicated above each column. Non-genotyped sites are noted with an â -â .
DOI: 10.6084/m9.figshare.7819196
title: MOESM6 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 6: Table S4. Sample information for canid genotyping. Sample and data access information for the resequencing dataset of 332 canines genotyped at the discovered CfERV-Fc1(a) reference and non-reference insertions. Accompanying data descriptions provided for each sample match that of Additional file 1: Table S1
DOI: 10.6084/m9.figshare.7819202.v1
title: Additional file 4: of Systemic distribution of medullary bone in the avian skeleton: ground truthing criteria for the identification of reproductive tissues in extinct Avemetatarsalia

description: Table S3. Comparison of the distributions of MB and pneumaticity in the stylopod of all studied specimens. The presence (â ) or absence (X) of osteological pneumatic features on the proximal epiphyses of the humerus and femur was recorded for each sampled specimen and confronted to the dataset on the presence (â ) or absence (X) of MB in these elements. Conflicting results are highlighted in red. (XLS 52 kb)
DOI: 10.6084/m9.figshare.7819196.v1
title: MOESM6 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 6: Table S4. Sample information for canid genotyping. Sample and data access information for the resequencing dataset of 332 canines genotyped at the discovered CfERV-Fc1(a) reference and non-reference insertions. Accompanying data descriptions provided for each sample match that of Additional file 1: Table S1
DOI: 10.6084/m9.figshare.7819184
title: Additional file 2: of Systemic distribution of medullary bone in the avian skeleton: ground truthing criteria for the identification of reproductive tissues in extinct Avemetatarsalia

description: Table S2. Comparison of the skeletal distributions of MB and pneumaticity in different bird species. Data on the skeletal distribution of MB come from the present study and the study of Werning ([43]: appendix 2). Data on the skeletal distribution of pneumaticity have been compiled from O’Connor ([48]: table 2), and O’Connor ([51]: table 2). The presence (√) or absence (X) of MB and pneumaticity was recorded in different elements / regions of the bird skeleton. We highlighted in red skeletal elements considered as pneumatic and containing MB. (XLS 41 kb)
DOI: 10.6084/m9.figshare.7819184.v1
title: Additional file 2: of Systemic distribution of medullary bone in the avian skeleton: ground truthing criteria for the identification of reproductive tissues in extinct Avemetatarsalia

description: Table S2. Comparison of the skeletal distributions of MB and pneumaticity in different bird species. Data on the skeletal distribution of MB come from the present study and the study of Werning ([43]: appendix 2). Data on the skeletal distribution of pneumaticity have been compiled from O’Connor ([48]: table 2), and O’Connor ([51]: table 2). The presence (√) or absence (X) of MB and pneumaticity was recorded in different elements / regions of the bird skeleton. We highlighted in red skeletal elements considered as pneumatic and containing MB. (XLS 41 kb)
DOI: 10.6084/m9.figshare.7819175
title: Additional file 1: of Systemic distribution of medullary bone in the avian skeleton: ground truthing criteria for the identification of reproductive tissues in extinct Avemetatarsalia

description: Table S1. Dataset comprising information on 1) the 40 specimens sampled; 2) their skeletal distribution of MB. The presence (√) or absence (X) of MB was recorded in 19 skeletal elements / regions representing most of the bird skeleton (manual phalanges nor included in the present study); 3) the history traits and ecology of the sampled species. See Material and Methods section for institutional abbreviations. (XLS 88 kb)
DOI: 10.6084/m9.figshare.7819178
title: MOESM4 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 4: Table S3. Gene region information and GO ontology analyses. The coordinates for each reference and non-reference insertion are provided along with Ensembl gene models from dog (release #81) that are within window distances of 0, 5, 10, 25, 50, and 100Â kb of the insertion.
DOI: 10.6084/m9.figshare.7819181
title: Additional file 4: of Human cardiac progenitor cell activation and regeneration mechanisms: exploring a novel myocardial ischemia/reperfusion in vitro model

description: Top IPA Canonical Pathways, Diseases and Bio Functions identified. (XLSX 156 kb)
DOI: 10.6084/m9.figshare.7819175.v1
title: Additional file 1: of Systemic distribution of medullary bone in the avian skeleton: ground truthing criteria for the identification of reproductive tissues in extinct Avemetatarsalia

description: Table S1. Dataset comprising information on 1) the 40 specimens sampled; 2) their skeletal distribution of MB. The presence (√) or absence (X) of MB was recorded in 19 skeletal elements / regions representing most of the bird skeleton (manual phalanges nor included in the present study); 3) the history traits and ecology of the sampled species. See Material and Methods section for institutional abbreviations. (XLS 88 kb)
DOI: 10.6084/m9.figshare.7819178.v1
title: MOESM4 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 4: Table S3. Gene region information and GO ontology analyses. The coordinates for each reference and non-reference insertion are provided along with Ensembl gene models from dog (release #81) that are within window distances of 0, 5, 10, 25, 50, and 100Â kb of the insertion.
DOI: 10.6084/m9.figshare.7819181.v1
title: Additional file 4: of Human cardiac progenitor cell activation and regeneration mechanisms: exploring a novel myocardial ischemia/reperfusion in vitro model

description: Top IPA Canonical Pathways, Diseases and Bio Functions identified. (XLSX 156 kb)
DOI: 10.6084/m9.figshare.7819169
title: MOESM3 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 3: Table S2. Information for non-reference sites considered in analyses. The coordinates relative to CanFam3.1 are provided for each identified non-reference insertion. For each site, information pertaining to the insertion orientation, target site duplication (relative to the CanFam3.1 reference), detected insertion alleles (provirus, solo LTR), and element sequence is provided. Primer sequences are provided for validated sites. (A) Information for sequenced loci and validated sequences. (B) Information for loci with complete assembled insertion alleles. (C) Information for loci with partially assembled insertion alleles.
DOI: 10.6084/m9.figshare.7819169.v1
title: MOESM3 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 3: Table S2. Information for non-reference sites considered in analyses. The coordinates relative to CanFam3.1 are provided for each identified non-reference insertion. For each site, information pertaining to the insertion orientation, target site duplication (relative to the CanFam3.1 reference), detected insertion alleles (provirus, solo LTR), and element sequence is provided. Primer sequences are provided for validated sites. (A) Information for sequenced loci and validated sequences. (B) Information for loci with complete assembled insertion alleles. (C) Information for loci with partially assembled insertion alleles.
DOI: 10.6084/m9.figshare.7819148
title: MOESM1 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 1: Table S1. Canine sample information for discovery of CfERV-Fc1(a) insertions. Information for the resequencing dataset of 101 canines used for CfERV-Fc1(a) insertion discovery. The sample identifier, sex, breed/species/population information and canine group is given per sample. Also provided are the Short Read Archive (SRA) sequence identifiers (SRR) matching the files downloaded and processed in this study, along with the PubMed identifier for the accompanying published study (if available) for each sample.
DOI: 10.6084/m9.figshare.7819151
title: Additional file 1: of Clinical impact of the type VI secretion system on virulence of Campylobacter species during infection

description: Table S1. Isolates and genome data. Description of data: List of analysed Campylobacter isolates with WGS and PCR results on the presence of T6SS. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.7819151.v1
title: Additional file 1: of Clinical impact of the type VI secretion system on virulence of Campylobacter species during infection

description: Table S1. Isolates and genome data. Description of data: List of analysed Campylobacter isolates with WGS and PCR results on the presence of T6SS. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.7819142
title: MOESM10 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 10: Table S7. Samples included in admixture analysis. Sample information for the 254 samples included in admixture analysis. Accompanying data columns provided for each sample match that of Additional file 1: Table S1.
DOI: 10.6084/m9.figshare.7819148.v1
title: MOESM1 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 1: Table S1. Canine sample information for discovery of CfERV-Fc1(a) insertions. Information for the resequencing dataset of 101 canines used for CfERV-Fc1(a) insertion discovery. The sample identifier, sex, breed/species/population information and canine group is given per sample. Also provided are the Short Read Archive (SRA) sequence identifiers (SRR) matching the files downloaded and processed in this study, along with the PubMed identifier for the accompanying published study (if available) for each sample.
DOI: 10.6084/m9.figshare.7819142.v1
title: MOESM10 of Origin and recent expansion of an endogenous gammaretroviral lineage in domestic and wild canids

description: Additional file 10: Table S7. Samples included in admixture analysis. Sample information for the 254 samples included in admixture analysis. Accompanying data columns provided for each sample match that of Additional file 1: Table S1.
DOI: 10.6084/m9.figshare.7819133
title: Additional file 9 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: 1000 Genomes Project populations. Table of 1000 Genomes Project populations and superpopulations and the number of individuals in each category. File name: 1000G_populations.html. (HTML 7 kb)
DOI: 10.6084/m9.figshare.7819127
title: Additional file 8 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: GTM projection, test set 6: Indian Telugu from the UK (ITU). Projection of Indian Telugu from the UK (black points) onto a GTM map trained with 10 principal components. File name: 1000G_GTM_projection_ITU.html. The file can be viewed in a web browser with internet access. (HTML 482 kb)
DOI: 10.6084/m9.figshare.7819133.v1
title: Additional file 9 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: 1000 Genomes Project populations. Table of 1000 Genomes Project populations and superpopulations and the number of individuals in each category. File name: 1000G_populations.html. (HTML 7 kb)
DOI: 10.6084/m9.figshare.7819121
title: Additional file 7 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: GTM projection, test set 5: Sri Lankan Tamil from the UK (STU). Projection of Sri Lankan Tamil from the UK (black points) onto a GTM map trained with 10 principal components. File name: 1000G_GTM_projection_STU.html. The file can be viewed in a web browser with internet access. (HTML 482 kb)
DOI: 10.6084/m9.figshare.7819127.v1
title: Additional file 8 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: GTM projection, test set 6: Indian Telugu from the UK (ITU). Projection of Indian Telugu from the UK (black points) onto a GTM map trained with 10 principal components. File name: 1000G_GTM_projection_ITU.html. The file can be viewed in a web browser with internet access. (HTML 482 kb)
DOI: 10.6084/m9.figshare.7819112
title: Additional file 6 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: GTM projection, test set 4: Gujarati Indian from Houston, Texas (GIH). Projection of Gujarati Indian from Houston (black points) onto a GTM map trained with 10 principal components. File name: 1000G_GTM_projection_GIH.html. The file can be viewed in a web browser with internet access. (HTML 483 kb)
DOI: 10.6084/m9.figshare.7819121.v1
title: Additional file 7 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: GTM projection, test set 5: Sri Lankan Tamil from the UK (STU). Projection of Sri Lankan Tamil from the UK (black points) onto a GTM map trained with 10 principal components. File name: 1000G_GTM_projection_STU.html. The file can be viewed in a web browser with internet access. (HTML 482 kb)
DOI: 10.6084/m9.figshare.7819112.v1
title: Additional file 6 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: GTM projection, test set 4: Gujarati Indian from Houston, Texas (GIH). Projection of Gujarati Indian from Houston (black points) onto a GTM map trained with 10 principal components. File name: 1000G_GTM_projection_GIH.html. The file can be viewed in a web browser with internet access. (HTML 483 kb)
DOI: 10.6084/m9.figshare.7819103
title: Additional file 4 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: GTM projection, test set 2: African Caribbeans in Barbados (ACB). Projection of African Caribbeans in Barbados (black points) onto a GTM map trained with 10 principal components. File name: 1000G_GTM_projection_ACB.html. The file can be viewed in a web browser with internet access. (HTML 471 kb)
DOI: 10.6084/m9.figshare.7819106
title: Additional file 5 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: GTM projection, test set 3: Mexican Ancestry from Los Angeles USA (MXL). Projection of individuals of Mexican ancestry from Los Angeles USA (black points) onto a GTM map trained with 10 principal components. File name: 1000G_GTM_projection_MXL.html. The file can be viewed in a web browser with internet access. (HTML 439 kb)
DOI: 10.6084/m9.figshare.7819106.v1
title: Additional file 5 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: GTM projection, test set 3: Mexican Ancestry from Los Angeles USA (MXL). Projection of individuals of Mexican ancestry from Los Angeles USA (black points) onto a GTM map trained with 10 principal components. File name: 1000G_GTM_projection_MXL.html. The file can be viewed in a web browser with internet access. (HTML 439 kb)
DOI: 10.6084/m9.figshare.7819097
title: Additional file 3 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: GTM projection, test set 1: Americans of African ancestry in SW USA (ASW). Projection of Americans of African ancestry in SW USA (black points) onto a GTM map trained with 10 principal components. File name: 1000G_GTM_projection_ASW.html. The file can be viewed in a web browser with internet access. (HTML 437 kb)
DOI: 10.6084/m9.figshare.7819103.v1
title: Additional file 4 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

description: GTM projection, test set 2: African Caribbeans in Barbados (ACB). Projection of African Caribbeans in Barbados (black points) onto a GTM map trained with 10 principal components. File name: 1000G_GTM_projection_ACB.html. The file can be viewed in a web browser with internet access. (HTML 471 kb)