cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.39ub7q
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Catasetum cristatum Lindl."
 ]
}

 The dataset includes 33 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0148157-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yzketi
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pachycondyla chinensis (Emery, 1895)"
 ]
}

 The dataset includes 76 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040884-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tvjsgb
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sicyos hillebrandii H.St.John"
 ]
}

 The dataset includes 20 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051598-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qrge2t
title: Occurrence Download

description: A dataset containing 1390 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Oecomys bicolor (Tomes, 1860)"
 ]
}

 The dataset includes 1390 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002232-240130105604617/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nn50gl
title: Occurrence Download

description: A dataset containing 877370 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Anthozoa",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 877370 records from 512 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040885-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ozwsmx
title: Occurrence Download

description: A dataset containing 313162 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Observational database of Icelandic plants"
 ]
}

 The dataset includes 313162 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030438-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c4n9cn
title: Occurrence Download

description: A dataset listing the 17 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rutilus rutilus (Linnaeus, 1758)"
 ]
}

 The dataset's 17 records were derived from 516 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002237-240130105604617/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pwbhxb
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sphaerodactylus oliveri storeyae Schwartz & Henderson, 1991",
 "Country is Cuba"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087345-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.shx5nv
title: Occurrence Download

description: A dataset containing 701 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abies koreana E.H.Wilson"
 ]
}

 The dataset includes 701 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041897-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wa8jk6
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "MediaType is Image",
 "TaxonKey is Adelia membranifolia (Müll.Arg.) Chodat & Hassl."
 ]
}

 The dataset includes 48 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009423-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yklayl
title: Occurrence Download

description: A dataset containing 592939 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Cuba"
 ]
}

 The dataset includes 592939 records from 676 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087346-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2crqc3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neopsylla pleskei orientalis Ioff & Argyropulo, 1934",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009436-231120084113126/datasets/export for details.
DOI: 10.15468/dl.r9cbjd
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cryptotis montivaga (Anthony, 1921)"
 ]
}

 The dataset includes 41 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041906-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tkgfaz
title: Occurrence Download

description: A dataset containing 829 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Giraffa camelopardalis (Linnaeus, 1758)"
 ]
}

 The dataset includes 829 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087348-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3p3uas
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hirundichthys Breder, 1928",
 "Country is India"
 ]
}

 The dataset includes 8 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041909-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.twkm23
title: Occurrence Download

description: A dataset containing 277 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diderma ochraceum Hoffm., 1796"
 ]
}

 The dataset includes 277 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014136-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.br4m9k
title: Occurrence Download

description: A dataset containing 808 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thyroptera tricolor Spix, 1823"
 ]
}

 The dataset includes 808 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041912-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xdn0zx
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tantilla boipiranga Sawaya & Sazima, 2003"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087349-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kmszrp
title: Occurrence Download

description: A dataset containing 48847 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saucerottia saucerottei (Delattre & Bourcier, 1846)"
 ]
}

 The dataset includes 48847 records from 199 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035262-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.iincne
title: Occurrence Download

description: A dataset containing 2309 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spilotes pullatus (Linnaeus, 1758)"
 ]
}

 The dataset includes 2309 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087351-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gjxbxc
title: Occurrence Download

description: A dataset containing 2103 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Loxodonta africana (Blumenbach, 1797)"
 ]
}

 The dataset includes 2103 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041913-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vjeeaw
title: Occurrence Download

description: A dataset containing 2155 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thamnodynastes Wagler, 1830"
 ]
}

 The dataset includes 2155 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087359-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.emwkcn
title: Occurrence Download

description: A dataset containing 6530 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stomias boa (Risso, 1810)"
 ]
}

 The dataset includes 6530 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014142-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fj55jy
title: Occurrence Download

description: A dataset containing 563 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trinycteris nicefori (Sanborn, 1949)"
 ]
}

 The dataset includes 563 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041917-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qzkbep
title: Occurrence Download

description: A dataset containing 135049 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Atriplex patula L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 135049 records from 782 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035658-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4jhzt7
title: Occurrence Download

description: A dataset containing 394 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Schisandra rubriflora (Franch.) Rehder & E.H.Wilson"
 ]
}

 The dataset includes 394 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030028-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6xsbvw
title: Occurrence Download

description: A dataset containing 4823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cladonia rangiferina (L.) Weber ex F.H.Wigg.",
 "Country is Norway"
 ]
}

 The dataset includes 4823 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030027-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15553426
title: Additional analyses: Variation of and associations with the depth and evenness of sequencing coverage in a sample of archived plastid genomes

description: Depth and evenness of sequencing coverage are considered potential indicators of genome assembly quality. In plastid genomics, where new data generation has outpaced the development of suitable assembly quality indicators, these coverage metrics could offer insights into the quality of plastomes of different sizes, structures, or taxonomic origins. However, the typical variation of sequencing depth and evenness among archived plastid genomes, their variability between plastome partitions, and any association with methodological factors have yet to be evaluated. This study explores the variation of sequencing depth and evenness across a sample of publicly accessible plastid genomes and their potential associations with plastome structure, assembly accuracy, and the methodological provenance of the genome data using statistical tests. Our results indicate significant differences in sequencing depth across the four structural partitions as well as between the coding and non-coding sections of the genomes, a significant correlation between sequencing evenness and the number of ambiguous nucleotides, and a significant difference in sequencing evenness between several DNA sequencing platforms. These findings highlight that many publicly accessible plastid genomes are based on sequence data with highly variable sequencing depth and evenness and that this variation is influenced, at least partially, by genome structure and methodological factors.
DOI: 10.5281/zenodo.15553425
title: Additional analyses: Variation of and associations with the depth and evenness of sequencing coverage in archived plastid genomes

description: Depth and evenness of sequencing coverage are considered potential indicators of genome assembly quality. In plastid genomics, where new data generation has outpaced the development of assembly quality indicators, these coverage metrics could offer insights into the quality of plastomes of different sizes, structures, or taxonomic origins. However, the variation of sequencing depth and evenness among archived plastid genomes, their variability between genome partitions, and any association with methodological factors have yet to be evaluated. This study explores the variation of sequencing depth and evenness across a sample of publicly accessible plastid genomes in relation to their genome structure, assembly quality, and methodological provenance using uni- and multivariate statistical analyses. We also evaluate whether sequencing evenness in plastid genomes is biased by phylogenetic signal and assembly software choice, and whether more uniformly distributed input sequence data improves plastome assembly quality. Our results indicate significant differences in sequencing depth across the four structural partitions and between the coding and non-coding regions of plastid genomes, a significant correlation between sequencing evenness and the number of ambiguous nucleotides, and a significant difference in sequencing evenness between sequencing platforms. However, we also find that different covariates representing additional, lesser explored factors often show a similar, if not greater, explanatory power for the coverage variation. No indications of phylogenetic or software choice bias on sequencing evenness and only weak indications of phylogenetic bias among the assembly quality metrics are detected, suggesting that our study results represent genuine patterns. We also find that normalizing the distribution of the input sequence data before plastome assembly may improve assembly accuracy. Taken together, these findings highlight that many public plastid genomes derive from sequence data with highly variable depth and evenness, and that this variation is influenced, at least partially, by genome structure as well as methodological factors.
DOI: 10.5281/zenodo.15621640
title: Additional analyses: Variation of and associations with the depth and evenness of sequencing coverage in archived plastid genomes

description: Depth and evenness of sequencing coverage are considered potential indicators of genome assembly quality. In plastid genomics, where new data generation has outpaced the development of assembly quality indicators, these coverage metrics could offer insights into the quality of plastomes of different sizes, structures, or taxonomic origins. However, the variation of sequencing depth and evenness among archived plastid genomes, their variability between genome partitions, and any association with methodological factors have yet to be evaluated. This study explores the variation of sequencing depth and evenness across a sample of publicly accessible plastid genomes in relation to their genome structure, assembly quality, and methodological provenance using uni- and multivariate statistical analyses. We also evaluate whether sequencing evenness in plastid genomes is biased by phylogenetic signal and assembly software choice, and whether more uniformly distributed input sequence data improves plastome assembly quality. Our results indicate significant differences in sequencing depth across the four structural partitions and between the coding and non-coding regions of plastid genomes, a significant correlation between sequencing evenness and the number of ambiguous nucleotides, and a significant difference in sequencing evenness between sequencing platforms. However, we also find that different covariates representing additional, lesser explored factors often show a similar, if not greater, explanatory power for the coverage variation. No indications of phylogenetic or software choice bias on sequencing evenness and only weak indications of phylogenetic bias among the assembly quality metrics are detected, suggesting that our study results represent genuine patterns. We also find that normalizing the distribution of the input sequence data before plastome assembly may improve assembly accuracy. Taken together, these findings highlight that many public plastid genomes derive from sequence data with highly variable depth and evenness, and that this variation is influenced, at least partially, by genome structure as well as methodological factors.
DOI: 10.25549/pcra-c14-41925
title: Redemption tidings, vol. 8, nos. 1-12, Jan.-Dec. 1932

description: [description english/roman)] Issued monthly. "A full gospel magazine for all believers" -- subtitle. Bound with vol. 7 & 9. Includes Missionary supplement to Redemption tidings in each issue (Jan.-Dec. 1932).
DOI: 10.15468/dl.3yj6br
title: Occurrence Download

description: A dataset containing 3874 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Citrus reticulata Blanco"
 ]
}

 The dataset includes 3874 records from 294 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030612-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qg6dhc
title: Occurrence Download

description: A dataset containing 114233 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Geometry POLYGON((-73.28705 6.97632,-73.41339 4.86694,-71.84784 4.823,-71.82587 6.95435,-73.28705 6.97632))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 114233 records from 162 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0348176-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ppemeq
title: Occurrence Download

description: A dataset containing 32109 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acacia karroo Hayne, Acacia longifolia F.Muell., Acacia mearnsii De Wild., Acacia saligna (Labill.) H.L.Wendl.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 32109 records from 210 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0143180-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-41971
title: Redemption tidings, vol. 8, nos. 1-12, Jan.-Dec. 1932

description: [description english/roman)] Issued monthly. "A full gospel magazine for all believers" -- subtitle. Bound with vol. 7 & 9. Includes Missionary supplement to Redemption tidings in each issue (Jan.-Dec. 1932).
DOI: 10.15468/dl.hfrj7t
title: Occurrence Download

description: A dataset containing 986489 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Machine Observation)",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is June",
 "Year 1999-2022"
 ]
}

 The dataset includes 986489 records from 367 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015976-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pd3n5g
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cycloramphus ohausi (Wandolleck, 1907))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 27 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062289-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m67cga
title: Occurrence Download

description: A dataset containing 1169 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bauhinia purpurea L."
 ]
}

 The dataset includes 1169 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0390642-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.