cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13055991.v2
title: Modeling Tail Index With Autoregressive Conditional Pareto Model

description: We propose an autoregressive conditional Pareto (AcP) model based on the dynamic peaks over threshold method to model a dynamic tail index in the financial markets. Unlike the score-based approach which is widely used in many articles, we use an exponential function to model the tail index process for its intuitiveness and interpretability. Probabilistic properties of the AcP model and the statistical properties of its parameter estimators of maximum likelihood are studied in this article. Real data are used to show the advantages of AcP, especially, compared to the estimation volatility of GARCH model, the result of AcP is more sensitive to turmoil. The estimated tail index of AcP can accurately reflect the risk of the stock and may even play an early warning role to the turmoil of stock market. We also calculate the tail connectedness based on the estimated tail index of AcP and show that tail connectedness increases during period of turmoil, which is consistent with the result of the score-based approach.
DOI: 10.6084/m9.figshare.7812821.v1
title: Additional file 1: of Overexpressing p130/E2F4 in mesenchymal stem cells facilitates the repair of injured alveolar epithelial cells in LPS-induced ARDS mice

description: Relative intensity of each band on the representative image of western blot. The relative intensity of bands on the representative images of SP-A, SP-C and occludin in Western blot was shown in Additional file 1 (XLSX 9 kb)
DOI: 10.6084/m9.figshare.7813028.v1
title: Additional file 9: of Transcriptomic analysis reveals the regulatory module of apple (Malus Ă domestica) floral transition in response to 6-BA

description: Table S7. Flowering genes involved in thermosensory, autonomous and vernalization pathways. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.7813178
title: MOESM6 of Rapid validation of transcriptional enhancers using agrobacterium-mediated transient assay

description: Additional file 6. Supplemental Tables 1â 5.
DOI: 10.6084/m9.figshare.17079538.v1
title: Additional file 1 of Diagnostic accuracy of pooling urine, anorectal, and oropharyngeal specimens for the detection of Chlamydia trachomatis and Neisseria gonorrhoeae: a systematic review and meta-analysis

description: Additional file 1: Appendix 1. Search strategy. Appendix 2. Further details of multisite pooled sampling for chlamydia and gonorrhoea. Supplementary Figure 1. Receiver operating characteristic (ROC) curve for multisite pooled testing for chlamydia. Supplementary Figure 2. Assessment for small study effects for multisite pooled testing for chlamydia. Supplementary Figure 3. Risk of bias summary as percentage. Supplementary Figure 4. Receiver operating characteristic (ROC) curve for multisite pooled testing for gonorrhoea. Supplementary Figure 5. Assessment for small study effects for multisite pooled testing for gonorrhoea. Supplementary Table 1. Meta-regression of the accuracy of multisite pooled testing for chlamydia according to study characteristics. Supplementary Table 2. The positive predictive value (PPV) and negative predictive value (NPV) for multisite pooled testing for chlamydia, over a range of background prevalence of chlamydia. Supplementary Table 3. Risk of Bias summary. Supplementary Table 4. GRADE table for multisite pooled testing for chlamydia. Supplementary Table 5. Meta-regression of the accuracy of multisite pooled testing for gonorrhoea according to study characteristics. Supplementary Table 6. The positive predictive value (PPV) and negative predictive value (NPV) for multisite pooled testing for gonorrhoea, over a range of background prevalence of gonorrhoea. Supplementary Table 7. GRADE table for multisite pooled testing for gonorrhoea. Supplementary Table 8. Study characteristics, methods of pooling, reported sensitivity and specificity of multisite pooled testing. References.
DOI: 10.6084/m9.figshare.21443635.v1
title: Additional file 2 of Sex differences exist in adult heart group 2 innate lymphoid cells

description: Additional file 2. DEGs of ILC2 and its clusters between female and male mice.
DOI: 10.6084/m9.figshare.13580275.v1
title: Tectonic Evolution of the Meso-Tethys Ocean: Insights from Geochemistry and Geochronology of the Jurassic ophiolitic complex in the Asa area, central Tibet

description: Although voluminous Jurassic ophiolites have been reported along the Bangong–Nujiang Suture Zone (BNSZ), the tectonic setting of ophiolites and the Jurassic evolution history of the Meso-Tethys Ocean remain mysterious. This study presents petrological, geochronological and geochemical data for newly discovered Jurassic ophiolitic complex in the Asa area, the Shiquanhe–Namco Ophiolite sub-belt (SNO sub-belt) of BNSZ. Detailed geological investigations and zircon U-Pb dating reveal that the Jurassic ophiolitic complex are composed of a suite of Mid-Late Jurassic (165–158 Ma) ophiolite and Early Jurassic gabbros (ca. 190 Ma). The Early Jurassic gabbros show affinities with island arc tholeiitic (IAT) basalts, which were derived from depleted mantle sources modified by oceanic slab-derived fluids and formed in a forearc settings. The Mid-Late Jurassic ophiolite mainly consists of peridotites, cumulate gabbros, isotropic gabbros, plagiogranites and greenschists. Whole-rock geochemical and zircon Hf isotopic data suggest that the Mid-Late Jurassic ophiolite formed in an intra-oceanicisland arc setting. Together, the Asa ophiolitic complex document magmatic processes from forearc extension to the development of intra-oceanicisland arc, confirming the occurrence of intra-oceanicsubduction system within the Meso-Tethys during the Jurassic. We tend to regard that both northward intra-oceanicsubduction and ocean–continent subduction were initiated during the Early Jurassic in the Meso-Tethys. During Mid-late Jurassic, a northward intra-oceanicarc–back-arc basin system developed in the Meso-Tethys, along with a continental forearc spreading basin resulting from northward ocean-continental subduction beneath the South Qiangtang terrane, producing the complex Jurassic ocean structure of the Meso-Tethys.
DOI: 10.6084/m9.figshare.7813187
title: Additional file 4: of Comparative genomics reveals the unique evolutionary status of Plasmodiophora brassicae and the essential role of GPCR signaling pathways

description: Table S4. Gene information of GPCR signaling pathway in Plasmodiophora brassicae ZJ-1 (XLSX 17 kb)
DOI: 10.3217/f6q9h-fc803
title: Dataset of Room Impulse Responses for Realistic Speech Data

description: Obtaining real-world multi-channel speech recordings is expensive and time-consuming. Therefore, multi-channel recordings are often artificially generated by convolving existing monaural speech recordings with simulated Room Impulse Responses (RIRs) from a so-called shoebox room for stationary (not moving) speakers. Far-field speech processing for home automation or smart assistants have to cope with moving speakers in reverberant environments. With this dataset, we aim to support the generation of realistic speech data by providing multiple RIRs along a fine grid of locations in a real room. We provide RIR recordings for a classroom and a large corridor. These RIRs can be used to simulate moving speakers by generating random trajectories on that grid, and quantize the trajectories along the grid points. For each matching grid point, the monaural speech recording can be convolved with the RIR at this grid point. Then, the spatialized recording can be compiled using the overlap-add method for each grid point.
DOI: 10.3217/n836h-kmf52
title: Dataset of Room Impulse Responses for Realistic Speech Data

description: Obtaining real-world multi-channel speech recordings is expensive and time-consuming. Therefore, multi-channel recordings are often artificially generated by convolving existing monaural speech recordings with simulated Room Impulse Responses (RIRs) from a so-called shoebox room for stationary (not moving) speakers. Far-field speech processing for home automation or smart assistants have to cope with moving speakers in reverberant environments. With this dataset, we aim to support the generation of realistic speech data by providing multiple RIRs along a fine grid of locations in a real room. We provide RIR recordings for a classroom and a large corridor. These RIRs can be used to simulate moving speakers by generating random trajectories on that grid, and quantize the trajectories along the grid points. For each matching grid point, the monaural speech recording can be convolved with the RIR at this grid point. Then, the spatialized recording can be compiled using the overlap-add method for each grid point.
DOI: 10.6084/m9.figshare.7813187.v1
title: Additional file 4: of Comparative genomics reveals the unique evolutionary status of Plasmodiophora brassicae and the essential role of GPCR signaling pathways

description: Table S4. Gene information of GPCR signaling pathway in Plasmodiophora brassicae ZJ-1 (XLSX 17 kb)
DOI: 10.6084/m9.figshare.13580358
title: MicroRNA-146a-5p enhances T helper 17 cell differentiation via decreasing a disintegrin and metalloprotease 17 level in primary sjögren’s syndrome

description: In clinical practice, we found that microRNA (miR)-146a-5p is significantly up-regulated in peripheral blood mononuclear cells (PBMCs) of primary sjögren’s syndrome (pSS) patients. <i>In vitro</i> experiments confirmed that miR-146a-5p promotes T helper 17 (Th17) cell differentiation, but the specific mechanism is still unknown. To solve this problem, 20 pSS patients and 20 healthy subjects were enrolled in this study and PBMCs were isolated from their blood. The expression of the membrane IL-23 R (mIL-23 R) in PBMCs was determined. CD3<sup>+</sup> T cells were also isolated and used to further analyze the relationship between the ectodomain shedding of mIL-23 R and a disintegrin and metalloprotease 17 (ADAM17). Finally, miR-146a-5p inhibitor and mimics were transfected into PBMCs to evaluate the relationship between ADAM17 and mIL-23 R, and explore the role of mIL-23 R and ADAM17 in Th17 cell differentiation. Our results revealed a significantly increased expression of miR-146a-5p in PBMCs from pSS patients and significantly increased percentage of Th17 cells compared to PBMCs from healthy controls. Under polarization culture conditions, pSS patient-derived PBMCs can more easily differentiate into Th17 cells, which was, to a great extent, attributable to the increased expression of mIL-23 R. Moreover, ADAM17, an ectodomain sheddase of mIL-23 R, was targeted and negatively regulated by miR-146a-5p, which reduced the ectodomain shedding of mIL-23 R. Overall, our results suggested that miR-146a-5p could promote Th17 cell differentiation through targeting and negatively regulating ADAM17. Thus, these results might offer a new approach in the treatment of pSS.
DOI: 10.6084/m9.figshare.21443760
title: Additional file 2 of Understanding of bacterial lignin extracellular degradation mechanisms by Pseudomonas putida KT2440 via secretomic analysis

description: Additional file 2: Table S4. Proteomic analysis of the intracellular and secretome in P. putida KT2440.
DOI: 10.6084/m9.figshare.13580358.v1
title: MicroRNA-146a-5p enhances T helper 17 cell differentiation via decreasing a disintegrin and metalloprotease 17 level in primary sjögren’s syndrome

description: In clinical practice, we found that microRNA (miR)-146a-5p is significantly up-regulated in peripheral blood mononuclear cells (PBMCs) of primary sjögren’s syndrome (pSS) patients. <i>In vitro</i> experiments confirmed that miR-146a-5p promotes T helper 17 (Th17) cell differentiation, but the specific mechanism is still unknown. To solve this problem, 20 pSS patients and 20 healthy subjects were enrolled in this study and PBMCs were isolated from their blood. The expression of the membrane IL-23 R (mIL-23 R) in PBMCs was determined. CD3<sup>+</sup> T cells were also isolated and used to further analyze the relationship between the ectodomain shedding of mIL-23 R and a disintegrin and metalloprotease 17 (ADAM17). Finally, miR-146a-5p inhibitor and mimics were transfected into PBMCs to evaluate the relationship between ADAM17 and mIL-23 R, and explore the role of mIL-23 R and ADAM17 in Th17 cell differentiation. Our results revealed a significantly increased expression of miR-146a-5p in PBMCs from pSS patients and significantly increased percentage of Th17 cells compared to PBMCs from healthy controls. Under polarization culture conditions, pSS patient-derived PBMCs can more easily differentiate into Th17 cells, which was, to a great extent, attributable to the increased expression of mIL-23 R. Moreover, ADAM17, an ectodomain sheddase of mIL-23 R, was targeted and negatively regulated by miR-146a-5p, which reduced the ectodomain shedding of mIL-23 R. Overall, our results suggested that miR-146a-5p could promote Th17 cell differentiation through targeting and negatively regulating ADAM17. Thus, these results might offer a new approach in the treatment of pSS.
DOI: 10.6084/m9.figshare.21443760.v1
title: Additional file 2 of Understanding of bacterial lignin extracellular degradation mechanisms by Pseudomonas putida KT2440 via secretomic analysis

description: Additional file 2: Table S4. Proteomic analysis of the intracellular and secretome in P. putida KT2440.
DOI: 10.6084/m9.figshare.7813196
title: Additional file 4: of Behavioral heterogeneity in quorum sensing can stabilize social cooperation in microbial populations

description: Dataset S1. Single nucleotide polymorphism sites of conditional defection strain different from that of cooperation strain. (XLSX 10 kb)
DOI: 10.15468/qk6wgq
title: A Taxonomic Revision of Chamaecrista (Caesalpinioideae, Cassieae, Cassiinae) in Southern Africa

description: This dataset contains the digitized treatments in Plazi based on the original journal article Musandiwa, Liada, Magee, Anthony R., Boatwright, James S. (2022): A Taxonomic Revision of Chamaecrista (Caesalpinioideae, Cassieae, Cassiinae) in Southern Africa. Systematic Botany (Basel, Switzerland) 47 (4): 992-1011, DOI: 10.1600/036364422x16674053033831, URL: http://dx.doi.org/10.1600/036364422x16674053033831
DOI: 10.6084/m9.figshare.7813196.v1
title: Additional file 4: of Behavioral heterogeneity in quorum sensing can stabilize social cooperation in microbial populations

description: Dataset S1. Single nucleotide polymorphism sites of conditional defection strain different from that of cooperation strain. (XLSX 10 kb)
DOI: 10.15124/22e0da9e-2cf0-4b77-bf23-c93053ffbe86
title: UK Anti-Genetic Modification Protests (1996-2016)

description: Protest event data for anti-genetic modification protests in the United Kingdom over the 1996-2016 period
DOI: 10.15468/jssxwk
title: Inventaire des coléoptères saproxyliques de France métropolitaine - Données de Benoît Dodelin pour l'Atlas SAPROX des coléoptères Tenebrionoidea partiel

description: Données de Benoît Dodelin pour l'Atlas SAPROX des coléoptères Tenebrionoidea partiel sur les 10 familles concernées, issues de ses propres prospections et de ses recherches bibliographiques
DOI: 10.15470/o2qraq
title: Aspurz-Garde (W Pyrenees) Permanent Plots

description: In 1999 the Forest Service of the Government of Navarre set up two experimental sites in Western Pyrenees (Navarra, NE Spain) to study the effect of different thinning intensities over Scots pine (Pinus sylvestris) stands in nine plots (30 x 40 m) per site. From 2000 to 2019 were recorded the species occurrences of vascular plants and bryophytes, and their cover measured in percentage, in ten 2 x 2 m quadrats per plot in both sites. The species checklist of each site is provided, based in the first recorded occurrence, with the geographical coordinates referred to the centroid of each site.
DOI: 10.15468/dw3jwu
title: Confinement de la retenue collinaire de la station de ski de la Pierre Saint-Martin, sur la Commune d'Arette-PSM Flore

description: Données d'observation de flore
DOI: 10.48597/px92-h95v
title: PM mass at Chaumont

description: Measurement of PM mass at Chaumont
DOI: 10.48597/qky9-8a3y
title: Pm10_mass at Waldhof

description: Measurement of Pm10_mass at Waldhof
DOI: 10.48597/qwyb-mrme
title: Inorganics in precipitation at Westerland

description: Measurement of Inorganics in precipitation at Westerland
DOI: 10.48597/qz6r-ttus
title: Inorganics in precipitation at Waldhof

description: Measurement of Inorganics in precipitation at Waldhof
DOI: 10.48597/s548-rmej
title: Inorganics in air and particle phase at Neuglobsow

description: Measurement of Inorganics in air and particle phase at Neuglobsow
DOI: 10.48597/s7hq-ppdq
title: OC/EC, heavy metals and inorganics in air and particle phase at Illmitz

description: Measurement of OC/EC, heavy metals and inorganics in air and particle phase at Illmitz
DOI: 10.48597/sc3t-ysgq
title: Inorganics in precipitation at Waldhof

description: Measurement of Inorganics in precipitation at Waldhof
DOI: 10.48597/sdnd-py97
title: Inorganics in precipitation at Zingst

description: Measurement of Inorganics in precipitation at Zingst
DOI: 10.48597/sj98-4avt
title: Inorganics in air and particle phase at Westerland

description: Measurement of Inorganics in air and particle phase at Westerland
DOI: 10.48597/tjsc-eh5z
title: Inorganics in precipitation at Deuselbach

description: Measurement of Inorganics in precipitation at Deuselbach
DOI: 10.48597/twne-6ccm
title: Inorganics in air and particle phase at Topolniky

description: Measurement of Inorganics in air and particle phase at Topolniky
DOI: 10.48597/ucr9-cyx8
title: Heavy metals at Schmücke

description: Measurement of Heavy metals at Schmücke
DOI: 10.48597/uhsf-bpq7
title: Nitrogen_dioxide at Schmücke

description: Measurement of Nitrogen_dioxide at Schmücke
DOI: 10.48597/umqp-mjpy
title: Heavy metals and inorganics in precipitation at Zingst

description: Measurement of Heavy metals and inorganics in precipitation at Zingst
DOI: 10.48597/uscy-ygjz
title: Inorganics in precipitation at Brotjacklriegel

description: Measurement of Inorganics in precipitation at Brotjacklriegel
DOI: 10.48597/uvcu-qe52
title: Inorganics in precipitation at Deuselbach

description: Measurement of Inorganics in precipitation at Deuselbach
DOI: 10.48597/v9xr-yzfu
title: Inorganics in precipitation at Schmücke

description: Measurement of Inorganics in precipitation at Schmücke
DOI: 10.48597/vezu-sxhc
title: Inorganics in air and particle phase at Zingst

description: Measurement of Inorganics in air and particle phase at Zingst
DOI: 10.48597/vh9f-wetm
title: Inorganics in precipitation at Westerland

description: Measurement of Inorganics in precipitation at Westerland
DOI: 10.48597/wdv4-uawf
title: Inorganics in air and particle phase at Westerland

description: Measurement of Inorganics in air and particle phase at Westerland
DOI: 10.48597/wtss-6pw5
title: Inorganics in precipitation at Schmücke

description: Measurement of Inorganics in precipitation at Schmücke
DOI: 10.48597/wwk9-crbg
title: Inorganics in air and particle phase at Westerland

description: Measurement of Inorganics in air and particle phase at Westerland
DOI: 10.48597/x9ze-un8k
title: Conductivity at Deuselbach

description: Measurement of Conductivity at Deuselbach
DOI: 10.48597/xvuj-cqtx
title: Inorganics in precipitation at Waldhof

description: Measurement of Inorganics in precipitation at Waldhof
DOI: 10.48597/ycm5-69xh
title: Inorganics in air and particle phase at Zingst

description: Measurement of Inorganics in air and particle phase at Zingst
DOI: 10.48597/yug8-g88n
title: Nitrogen_dioxide at Cubuk II

description: Measurement of Nitrogen_dioxide at Cubuk II
DOI: 10.48597/zn45-e7z2
title: Nitrate at Deuselbach

description: Measurement of Nitrate at Deuselbach
DOI: 10.48597/zvym-mh4a
title: Inorganics in air and particle phase at Neuglobsow

description: Measurement of Inorganics in air and particle phase at Neuglobsow
DOI: 10.48597/2kd8-w6ke
title: Measurement of Inorganics in precipitation at Braganca

description: Measurement of Inorganics in precipitation at Braganca
DOI: 10.48597/2y9y-bavs
title: Measurement of Inorganics in precipitation at Braganca

description: Measurement of Inorganics in precipitation at Braganca
DOI: 10.48597/3cth-txyp
title: Measurement of Inorganics in air and particle phase at Hummelfjell

description: Measurement of Inorganics in air and particle phase at Hummelfjell
DOI: 10.48597/3hm4-eueg
title: Measurement of Sulphate_total at Braganca

description: Measurement of Sulphate_total at Braganca
DOI: 10.48597/3we6-x72u
title: Measurement of Inorganics in precipitation at Jergul

description: Measurement of Inorganics in precipitation at Jergul
DOI: 10.6084/m9.figshare.7813244
title: Additional file 1: of The imbalance in the complement system and its possible physiological mechanisms in patients with lung cancer

description: Table S1. Datasets from microarray-based transcriptomic and RNA-Seq analyses extracted from published publications. (XLSX 166 kb)
DOI: 10.48597/45bz-ubz8
title: Measurement of Inorganics in air and particle phase at Hummelfjell

description: Measurement of Inorganics in air and particle phase at Hummelfjell
DOI: 10.48597/4jb6-gpnb
title: Measurement of Inorganics in precipitation at Jergul

description: Measurement of Inorganics in precipitation at Jergul
DOI: 10.15468/dl.5yam9p
title: Occurrence Download

description: A dataset containing 1745 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "Geometry POLYGON((-7.47261 36.01682,1.17508 36.01682,-2.0929 39.98474,-7.47261 40.00981,-7.47261 36.01682))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Teucrium fruticans L.",
 "Year 2000-2021"
 ]
}

 The dataset includes 1745 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0154362-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lbuujc
title: Occurrence Download

description: A dataset containing 286 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Uncaria tomentosa (Willd. ex Schult.) DC."
 ]
}

 The dataset includes 286 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000299-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e7w3rz
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "HasCoordinate is true",
 "TaxonKey is Campanula rotundifolia subsp. willkommii (Witasek) Blanca",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004515-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ddt9wy
title: Occurrence Download

description: A dataset containing 2872 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Engraulis encrasicolus (Linnaeus, 1758)",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2014"
 ]
}

 The dataset includes 2872 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058657-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.