cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.7dc4fv
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Selago tenuis E.Mey."
 ]
}

 The dataset includes 22 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107389-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25007006
title: proof

description: This is a test
DOI: 10.6084/m9.figshare.25007006.v2
title: proof

description: This is a test
DOI: 10.15468/dl.fstg74
title: Occurrence Download

description: A dataset containing 409 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio umbellatus L."
 ]
}

 The dataset includes 409 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107388-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25007006.v1
title: <b>Use of secondary diversity data to improve diversity estimates at multiple geographic scales</b>

description: Studying the patterns and properties of biological diversity at multiple geographic scales is essential to answering biogeographical and macroecological questions. Here, we tested the hypothesis that diversity estimates from stacked ecological niche models (staked ENMs) are positively related to the diversity observed from checklists areas (i.e., “well-sampled” localities), while this relationship will be more ambiguous when diversity estimates are made from curate species occurrence (presence-only dataset). We used these tree diversity sources to evaluated alpha and beta diversity, per-site range size total nestedness and completeness at five geographic scales (1/2°, 1/4°, 1/8°, 1/16° and 1/32°). Estimates from presence-only dataset and stacked ENMs were poor correlated with alpha diversity from checklists areas (except to stacked ENMs at 1/32°), and beta diversity from checklists areas was strongly correlated with presence-only dataset and stacked ENMs at finer scales. The nestedness pattern from stacked ENMs remained relatively constant over all geographic scales; conversely, presence-only datasets nestedness was influenced by finer scales, affecting community traits such as incidence and composition of species. Our study demonstrates that stacked ENMs was reliable to inferring effective diversities over all scales, and presence-only datasets are not adequate to estimate effective diversities, and may fail to infer diversity patterns. We recommend complementary analysis of completeness properties of the sample coverage to get reliability over diversity assessments.
DOI: 10.15468/dl.nkvwjx
title: Occurrence Download

description: A dataset containing 1530 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Secamone afzelii (Roem. & Schult.) K.Schum."
 ]
}

 The dataset includes 1530 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107390-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.srx4q9
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scleria multilacunosa T.Koyama"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107391-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aghp6s
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ruellia woodii C.B.Clarke"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107392-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3t6upk
title: Occurrence Download

description: A dataset containing 135 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Shorea sumatrana (Slooten) Desch"
 ]
}

 The dataset includes 135 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107393-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uzkzyg
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Selago thermalis Hilliard"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107394-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wk7w2e
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio umbricola Cron & B.Nord."
 ]
}

 The dataset includes 12 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107395-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t2kx7s
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scleria mutoensis Nakai"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107396-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fewbc6
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Secamone alba Jum. & H.E.P.Perrier"
 ]
}

 The dataset includes 22 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107397-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jvnvbs
title: Occurrence Download

description: A dataset containing 213 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ruelliopsis setosa (Nees) C.B.Clarke"
 ]
}

 The dataset includes 213 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107398-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tdufde
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Shorea superba Symington"
 ]
}

 The dataset includes 83 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107399-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.repvmn
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Selago thomii Rolfe"
 ]
}

 The dataset includes 37 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107400-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rbbrpk
title: Occurrence Download

description: A dataset containing 311 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio umbrosus Waldst. & Kit."
 ]
}

 The dataset includes 311 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107401-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.44ve83
title: Occurrence Download

description: A dataset containing 1098 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Secamone alpini Schult."
 ]
}

 The dataset includes 1098 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107402-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rp7tjn
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scleria natalensis Boeckeler ex C.B.Clarke"
 ]
}

 The dataset includes 53 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107403-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hen4wm
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ruhooglandia hooglandii (Holttum) S.Dransf. & K.M.Wong"
 ]
}

 The dataset includes 36 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107404-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.23a6gb
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Shorea thorelii Pierre ex Laness."
 ]
}

 The dataset includes 114 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107405-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7shxwx
title: Occurrence Download

description: A dataset containing 176 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Selago thomsonii Rolfe"
 ]
}

 The dataset includes 176 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107406-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aga8bp
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio umgeniensis Thell."
 ]
}

 The dataset includes 49 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107407-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ndrzyk
title: Occurrence Download

description: A dataset containing 748 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scleria naumanniana Boeckeler"
 ]
}

 The dataset includes 748 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107408-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zequ5x
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Secamone angustifolioides Choux"
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107410-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m4tqv4
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ruizia blackburniana (Bojer ex Baker) Dorr"
 ]
}

 The dataset includes 20 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107409-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5tf7gk
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Shorea tumbuggaia Roxb."
 ]
}

 The dataset includes 21 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107411-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8hx4ej
title: Occurrence Download

description: A dataset containing 79 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Selago thyrsoidea Baker"
 ]
}

 The dataset includes 79 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107412-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10891007
title: Tutorial data for NordTEMhub/ARTEMI Workshop, Three-Dimensional Electron Diffraction

description: The data is used for NordTEMhub/ARTEMI Workshop, Three-Dimensional Electron Diffraction, 15-17 April 2024, Stockholm, Sweden.

A. Data information

There are 3 folders in the zip file.

1) Part1_3_data_processing_1dataset: 

     This folder includes 1 CAU-36 dataset for Part 1-3 of the tutorial. 

2) Part4_batch_data_processing_8datasets: 

     This folder contains 8 CAU-36 datasets for Part 4 of the tutorial.

3) Part5_bonus_Lysozyme_protein_47datasets:    

     47 lysozyme datasets. The data will not be included in this tutorial.

 

B. Data collection 

The cRED data of CAU-36 was collected with an ASI Timepix hybrid detector installed on a JEOL JEM-2100 (200 kV) microscope equipped with a LaB6 filament. 

 






Sample



CAU-36, MOF





Related Publications



Chem.: Eur. J., 24, 2018





TEM



JEOL JEM-2100LaB6, 200 kV





Camera



ASI TimePix





 

The MicroED data of lysozyme was collected with an CetaD detector installed on a Titan krios Titan Krios G3i equipped with an autoloader. The data collection software was EPU-D.

 

B. Required data processing software 

Information about RED:

Wan. W. et. al. “Three-dimensional rotation electron diffraction: software RED for automated data collection and data processing”, Journal of Applied Crystallography, 2013

Zhang. D. et. al. “Collecting 3D electron diffraction data by the rotation method”, Zeitschrift für Kristallographie, 2010

Website: https://www.mmk.su.se/zou/electron-crystallography-software/rotation-electron-diffraction-red

Information about XDS:

Kabsch. W. “XDS”, ACTA CRYSTALLOGRAPHICA SECTION D, 2010

XDS Wiki: https://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/Main_Page

AutoXDSGUI:

A homemade batch data processing software. Will be available in Zenodo or Github soon!

 

C. Structure determination software

Information about Shelx (including Shelxs, Shelxt and Shelxl) for CAU-36:

http://shelx.uni-ac.gwdg.de/SHELX/

Information about Phenix for protein:

https://phenix-online.org/

Information about Coot for protein:

https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
DOI: 10.15468/dl.awuemh
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio unionis Sch.Bip. ex A.Rich."
 ]
}

 The dataset includes 72 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107414-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5cqgj9
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scleria neesii Kunth"
 ]
}

 The dataset includes 78 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107415-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3evmv4
title: Occurrence Download

description: A dataset containing 96 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Secamone ankarensis (Jum. & H.E.P.Perrier) Klack."
 ]
}

 The dataset includes 96 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107416-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hfqq64
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Shorea wangtianshuea Y.K.Yang & J.K.Wu"
 ]
}

 The dataset includes 69 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107418-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f4722e
title: Occurrence Download

description: A dataset containing 451 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ruizia cordata Cav."
 ]
}

 The dataset includes 451 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107417-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d2jbq8
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Selago trauseldii Killick"
 ]
}

 The dataset includes 21 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107420-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b9r5xn
title: Occurrence Download

description: A dataset containing 965 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "TaxonKey is Ursus maritimus Phipps, 1774",
 "Year 2000-2024"
 ]
}

 The dataset includes 965 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107419-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q86dmm
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio urophyllus Conrath"
 ]
}

 The dataset includes 24 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107421-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dbqzy5
title: Occurrence Download

description: A dataset containing 140 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-4.94091 36.51073,-4.9152 36.51073,-4.9152 36.52679,-4.94091 36.52679,-4.94091 36.51073))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 140 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107423-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rhnkd9
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scleria neocaledonica Rendle"
 ]
}

 The dataset includes 58 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107422-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3kwtm7
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Secamone astephana Choux"
 ]
}

 The dataset includes 90 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107424-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yg8s73
title: Occurrence Download

description: A dataset containing 35754 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Leontopodium nivale (Ten.) A.Huet ex Hand.-Mazz., Artemisia eriantha Ten., Teucrium eriocephalum subsp. almeriense (C.E.Hubb. & Sandwith) T.Navarro & Rosua, Erodium foetidum (L.) L'Hér., Plantago arenaria subsp. arenaria, Polygala major Jacq.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 35754 records from 365 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107413-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a7vv78
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salix hastata subsp. sierrae-nevadae Rech.fil."
 ]
}

 The dataset includes 11 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059607-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vw6h34
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tripterospermum microphyllum Harry Sm.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 46 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010241-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-58722
title: Redemption tidings, vol. 40, nos. 1-50, 3 Jan. - 25 Dec. 1964

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.df6jl2
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Hericium coralloides (Scop.) Pers."
 ]
}

 The dataset includes 63 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002265-180920211646547/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.