cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27191028.v1
title: Goat rumen MAGs and the corresponding taxonomic and quality information

description: This item includes 5,514 MAGs obtained through binning using goat rumen metagenomic sequencing data, and the .xlsx file contains the taxonomic and genomic quality information of these MAGs.
DOI: 10.3535/6jy-md3-lxk
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nsh-b8q-7dr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/8dm87k7cm8
title: EBSD files from manuscript "Dynamic recrystallization by subgrain rotation in olivine revealed by electron backscatter diffraction"
DOI: 10.17632/s42tkgkf5d
title: Energy, protein, dry matter and water gap analysis in dairy cows kept under cut and carry fodder- based feeding system.

description: There is a gap in dry matter, water, energy and protein intake of dairy cows kept in cut and carry fodder-based feeding systems in Sub-Saharan countries, Rwanda included. Data on feed characterization were computed using the FarmDESIGN models by Groot and Oomen (2016), while data on cows’ production requirements were calculated using LIGAPS dairy models. Data were analyzed using a general linear model (GLM) in SPSS. Results on feed characteristics showed that the average nutritive value of the offered fodder was 25% dry matter (DM), 58.5% neutral detergent fibre (NDF), 9.8% crude protein (CP), and 6 MJ of metabolizable energy (ME) per kg DM. The average daily feed intake was 9 kg DM, 35 litres of water, 898 g of CP, and 55 MJ of ME, resulting in milk production of 8.8 litres per day across both sites. However, the average requirement for maintaining a dairy cow with a body weight of 430 kg and a target milk production of 16.5 litres per day was 15 kg of DM, 57 Litres of water, 1907 g of CP, and 137 MJ of ME. This resulted in daily deficits of 6 kg DM, 21.6 litres of water, 1,094 g of CP, and 83.7 MJ of ME, along with a 7.6-litre shortfall in daily milk yield. Available fodder in the dry season is low in quantity and quality for sustaining maintenance and milk production and measures of storing enough fodders that are of good quality are much needed. These findings will be used by researchers in developing dairy diet models at the household level. For dairy feed manufacturers, this analysis will guide proper rationing of high-concentrate ingredients rich in energy and protein, in line with cows’ nutritional requirements. Identifying the gap in available feed resources will encourage farmers to adopt effective feeding management practices that enhance energy, protein, and water intake leading to improved milk production.
DOI: 10.3535/ag1-8rl-e2z
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ewh-em1-sb1
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/nnmb6m5p5j
title: Transcriptional space-time mapping identifies concerted immune and stromal cell patterns and gene programs in wound healing and cancer (Human scRNA-Seq sample dataset))

description: Feature, barcode and count matrix for the combined human scRNA-Seq dataset. Samples.csv file denotes patient ID for each cell where HNSC = Head and Neck Squamous Cell and LUNG = Lung Adenocarcinoma. N = Adjacent normal and T = Tumor
DOI: 10.3535/9y5-9rk-lgq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zx3-223-g34
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.15050472.v1
title: Dataset for spontaneous imbibition in sintered glass beads and Estaillades

description: The dataset includes (1) the source code of the developed dynamic pore-network model, and (2) the case studies presented in the preprint 'spontaneous imbibition in porous media from pore-scale to Darcy scale' by C. Qin, X. Wang, M. Hefny, J. Zhao, and B. Guo (arXiv preprint arXiv:2104.03370), 2021.
DOI: 10.6084/m9.figshare.17060657.v2
title: DEM of synthetic surfaces

description: DEM of ellipsoid, inverse ellipsoid, inclined plane and saddle
DOI: 10.6084/m9.figshare.28417283.v1
title: Referral data system

description: The data was extracted from the National Referral Coordinator’s database consisting of secondary, de-identified, individual patients and hospital bed occupancy data collected daily at government secondary and tertiary hospitals. <br>
DOI: 10.6084/m9.figshare.3407461.v1
title: PLoS_2016.csv

description: Base data for estimating precision and recall of Author-ity among NIH-funded scientists
DOI: 10.17632/2k74fx97w8
title: language, identity, and development of linguistic insecurity among secondary school students in Ghana

description: The data describes how school-related practices in Ghanaian senior high schools contribute to language shift and maintenance, as well as the development of linguistic insecurity among students. It concerns how parental pressure, victimisation of student for speaking their native language, and the overwhelming importance placed on English language contribute to students' sense of insecurity regarding the use of their native languages
DOI: 10.3535/695-5ey-n3n
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/we7-e2s-kzm
title: Multisolenia festiva (Tchernychev, 1951)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/bfypd4wpcn
title: Myers et al. Great Lakes Basin model and data

description: This dataset includes a Soil and Water Assessment Tool hydrological model with rain-on-snow modification for the Great Lakes Basin. It also includes climate projection files and basins GIS data.
DOI: 10.3535/lt2-zn6-41f
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pgy-ap0-5x5
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11860596.v16
title: Measurement of socially responsible consumption behaviour using the SRPD scale

description: Data were collected from 25 September 2017 to 19 October 2017 in Chennai, Tamil Nadu, India.
DOI: 10.17632/g278w62zpg
title: Paused Transcription Test (Lange & Matthews, 2020)
DOI: 10.3535/5jk-b2w-p94
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ztq-wqy-36d
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1428673.v1
title: Assembly Pipeline Metrics for FDA-CFSAN Pathogen WGS Surveillance

description: Assembly performance metrics for the FDA-CFSAN Pathogen WGS Surveillance Assembly Pipeline, collected since it's inception. Doesn't include organismal data or public accessions, but anything public should be retrievable from it's CFSAN accession number via NCBI.
DOI: 10.6084/m9.figshare.21896475.v1
title: Antibiotics under our feet: investigating the presence of ESKAPE bacteria and other human pathogens in our urban soil samples

description: This dataset consists of a Krona chart visualisation of our bioinformatics results for our first six soil samples sent for DNA sequencing. The Krona chart was used to determine if ESKAPE pathogens or other human pathogens were present in our soil samples. A spreadsheet of the results together is included. Two tables to display the results (ESKAPE pathogens, other human pathogent) were produced and are presented here in .mp4 video format that can be paused to view results for each soil sample. The data analysis for this part of the "Antibiotics under our feet" was carried out in collaboration with a Nuffield Research Placement student at the University of St Andrews during the summer of 2022. The Nuffield project protocol with instructions for analysing the Krona chart to gather data is included.
DOI: 10.6084/m9.figshare.28669166.v1
title: Code for meta-analysis

description: Code in Rstudio for meta-analysis from <b><i>MoyaMoya Disease in Latin America: A systematic review and meta-analysis with an illustrative case</i></b>
DOI: 10.6084/m9.figshare.5135086.v2
title: Data used in "Turbulent mixing within the Kuroshio in the Tokara Strait"

description: Observation data used in a paper submitted to Journal of Geophysical Research: -Oceans, "Turbulent mixing within the Kuroshio in the Tokara Strait" by E. Tsutsumi, T. Matsuno, R.-C. Lien, H. Nakamura, T. Senjyu, and X. Guo<br>
DOI: 10.3535/sja-43j-496
title: Lingula Bruguière, 1791

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28069865.v1
title: Enhancing greenhouse agriculture with IM-AlexNet: A novel method for accurate pest and disease identification

description: <b>Abstract:</b>China is the world's largest producer of greenhouse vegetables. Although greenhouse cultivation can extend the vegetable supply cycle and improve yield and quality, the closed environment can easily lead to a high incidence of pests and diseases, posing huge challenges to prevention and control work. To address this problem, this study proposes a greenhouse vegetable pest and disease identification method based on the improved AlexNet (IM-AlexNet) model. By introducing the ReLU6 activation function, batch normalization algorithm and GoogleNet Inception-v3 module, the model significantly improves the recognition performance and effectively solves problems such as noise interference, poor model convergence and target positioning overfitting. Experimental results show that the IM-AlexNet model is better than the traditional model in indicators such as Precision, Recall, F1 and MAP. Specifically, its MAP value is 88.91%, which is 10.77%, 8.6% and 5.14% higher than the AlexNet, CNN and YOLO-v7 models respectively. In addition, its ability to identify pest and disease targets in complex backgrounds is significantly enhanced, effectively reducing the missed detection rate, and showing stronger generalization capabilities under small sample conditions. This study shows that the IM-AlexNet model can help greenhouse vegetable growers quickly and accurately identify pests and diseases, thereby reducing the use of broad-spectrum pesticides, saving resources, and protecting the environment and consumer health. The results of this research provide an effective tool for intelligent monitoring of pests and diseases in greenhouse cultivation, and also provide an important reference for further research in related fields.<br><br><br>
DOI: 10.17632/f5mmfs45rt
title: Social Media Marketing

description: Digital Marketing
DOI: 10.25413/sun.12952274.v2
title: Inferring the number of COVID-19 cases from recently reported deaths

description: We estimate the number of COVID-19 cases from newly reported deaths in a population without previous reports. Our results suggest that by the time a single death occurs, hundreds to thousands of cases are likely to be present in that population. This suggests containment via contact tracing will be challenging at this point, and other response strategies should be considered. Our approach is implemented in a publicly available, user-friendly, online tool.
DOI: 10.3535/g3d-jxy-h6a
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qd4-q1s-x13
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v3d-13l-ten
title: Craniida Waagen, 1885

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ymt-4p9-62y
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.17096903.v1
title: New Microsoft Excel Worksheet.xlsx

description: distance
DOI: 10.3535/6mm-lpe-546
title: Auloporida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6sa-hvl-zj6
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/40e-b18-ph2
title: Catenipora

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5tz-65a-eg3
title: Chalcedony

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16708723.v1
title: Fig2C-D.xlsx

description: difference of 2-meter temperature (Temp), relative humidity (RH) and incident ultraviolet radiation b (UVB) at 14:00 local time between typhoon-associated weather system and the summertime climatology in PRD and YRD, respectively.
DOI: 10.6084/m9.figshare.27857787.v3
title: <b>Supplementary Material</b>

description: These files constitute Supplementary Material 1, which provides a detailed description of the search strategy employed in this study, and Supplementary Material 2, which includes the chemical structures of the molecules identified within the genera examined.
DOI: 10.6084/m9.figshare.4815157.v1
title: folder_15

description: Honeybee accelerometer recordings
DOI: 10.3535/520-mgp-ll1
title: Catenipora

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fnp-z9j-f9z
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20267163.v2
title: Train

description: Images with rotation-determinism
DOI: 10.6084/m9.figshare.833889.v1
title: SG hybrid trace of CG class C with 64 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.17632/k89yd4jrbj
title: Does deteriorating oxidative defence and impaired γ-glutamyl cycle drive pathophysiology in individuals with sickle cell disease?

description: ickle cell disease (SCD) is a global health crisis, affecting two-thirds of the children born in Africa and India. Oxidative stress, pivotal in SCD pathophysiology, induces endothelial dysfunction and inflammation. This study reassesses oxidative stress in SCD via intricate interplay of metabolites, antioxidant enzymes, and ion profiles. We assessed the plasma elemental levels of SCD patients, trait and healthy controls (n=10) via ICP-MS. Additionally, comparative erythrocyte metabolomics of SCD and healthy (n=5) was carried out using LC-MS mass-spectrometry. Followed by assessment of antioxidant defence (AD) enzymes such as glutathione reductase (GR), superoxide dismutase (SOD), and catalase (CAT) in erythrocytes and plasma of SCD patients (n=31) compared to trait (n=8) and healthy (n=9). In principal component analysis, 442 metabolic features clustered separately with 135 exhibiting differential expression in the SCD vs HC. In SCD, upregulation of N6,N6,N6-Trimethyl-L-lysine, Pyroglutamate and 2-Aminoisobutyric while downregulation of Glutathione, Aminolevulinate and D-Glutamine was observed. SCD suffered dysregulations in D-Glutamine/Glutamate, Sphingolipid, Arginine biosynthesis, Gly/SerThr, β-Alanine, and Glutathione pathway. In SCD, plasma ion profiling yielded an elevated 24Mg, 44Ca, 66Zn,208Pb,39K and a decreased 57Fe,77Se, 85Rb indicating hemolysis, ion-channelopathy and anemia. SCD exhibited repressed activities of GR, SOD, and CAT in erythrocytes and plasma. SCD-RBCs displayed negligible GR and CAT activity changes, while trait and HC exhibited significant AD activity increase under hypoxia. Our findings highlight metabolic deregulations in SS-RBCs, a compromised antioxidant defence, reduced heme synthesis, ion-channel dysfunction, a shift to ATP consuming aberrant γ-glutamyl cycle leading to clinical manifestations such as oxidative stress, anemia, dehydration and hemolysis.
DOI: 10.3535/7q9-xeg-laf
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hp4-q8r-5sj
title: Placodermi

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.14749/27643044
title: We look out for our children, Focal child (SIZE) 2010-12. Msunduzi Municipality - KwaZulu-Natal

description: <p> This dataset contains responses obtained directly from the study focal child. There is information from 1835 children from the 1961 households that participated in the household survey. However, to facilitate linking, the HHIDs of households completing the household survey were added to this file with no data meaning there are 1961 records in this file</p>
DOI: 10.17632/jfpzyxchjb
title: Dawwen

description: These data is used for usability testing of Dawwen: An Arabic Mental Health Mobile App Based on Natural Language Processing
DOI: 10.3535/h74-0lj-6yl
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n0j-swq-j3d
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yqp-ax8-xy2
title: Stenopareia

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12643877.v1
title: mathematica code from The effect of an exterior electric field on the instability of dielectric plates

description: mathematica code for the numerical results
DOI: 10.6084/m9.figshare.27586587.v1
title: Forcefield Analysis in Sagittarius A* and Hypothetical Second Black Hole

description: This paper presents a theoretical forcefield analysis of Sagittarius A*, the supermassive black hole at the center of the Milky Way, and a hypothetical secondary black hole. Recent observations suggest that Sagittarius A* may exhibit an elongated structure rather than a purely spherical shape. We hypothesize that this elongation could be due to gravitational interactions with an unseen second black hole. To investigate this possibility, we calculated gravitational forces, graviton corrections, centrifugal forces, and gravitational wave strengths within this system, using distances ranging from to meters between Sagittarius A* and the hypothetical companion. Our approach incorporates the mass of Sagittarius A* () and the hypothetical second black hole (), along with their Schwarzschild radii and gravitational constants. Notably, we considered the accretion disk’s rotation at 60% of the speed of light around Sagittarius A*, which adds a significant centrifugal force component. This setup allows us to simulate the gravitational field and assess its elongation effects, illustrating potential asymmetries in the gravitational structure that may align with observational data. Our findings include visualized gravitational force fields for both objects and the elongation axis’s directional bias. This analysis aims to support the scientific community in exploring the hypothesis of an additional black hole within the vicinity of Sagittarius A*, as well as further validating the elongated structure. The visualizations provided could serve as a basis for additional studies using instruments such as the Event Horizon Telescope to confirm or refute these findings.
DOI: 10.6084/m9.figshare.28030211.v1
title: Harnessing Big Data in Epidemiology and Public Health

description: The datasets provided offer a treasure trove of information, capturing the nuances of India's public health, education, and socio-economic landscapes. Each dataset is meticulously organized to deliver specific insights, making them invaluable for policy analysis and decision-making.<br><br>Originally sourced from Worldbank and UNICEF websites<br>https://data.unicef.org/resources/resource-type/datasets/ <br>https://data.worldbank.org/country/india?view=chart
DOI: 10.3535/fhd-gck-5pd
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.15468/dl.k3ntaf
title: Occurrence Download

description: A dataset containing 6524 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (NMNH Extant Specimen Records (USNM, US), Field Museum of Natural History (Zoology) Invertebrate Collection, Canadian Museum of Nature Mollusc Collection, Malacology Collection at the Academy of Natural Sciences of Philadelphia, University of Michigan Museum of Zoology, Division of Mollusks, Illinois Natural History Survey - Mollusk Collection, Royal Ontario Museum - Invertebrate Zoology, International Barcode of Life project (iBOL), UF Invertebrate Zoology, INSDC Sequences)",
 "TaxonKey is Ladislavella elodes (Say, 1821)"
 ]
}

 The dataset includes 6524 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009664-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/edz-7bn-nyh
title: Bivalvia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t5y-2v2-lg9
title: Aethilla Hewitson, 1868

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.9794549.v1
title: Transcripciones entrevistas Makers

description: Transcripciones de entrevistas a varios makers.<br>
DOI: 10.17632/84g3gtwyf4
title: Microscopic imaging of human and companion animals hair Lactophenol cotton blue wet mounts

description: The current dataset consists of two categories : -The first category based on the differences between microscopic images of human and different companion animals (dogs, cats, , camels, cows, rats, rabbits, horses, different species of pet birds (chicken, baby chick, crow, parrot and duck) hairs/feathers, including nine data files which are divided as follow: one contains images represent human hair samples and the remaining eight files of the animal species involved through the collected data. -The second category depends on microscopic detection of the dermatophytes arthrospores arrangement, parasitism and invasion of the examined hair including two data files, one for positive dermatophytosis samples image and the other for negative dermatophytosis samples image.
DOI: 10.3535/3df-vyf-r4n
title: Plantae

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.13145/bacdive100385.20241212.9.2
title: Terrisporobacter mayombei

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive100385.20251217.10
title: Terrisporobacter mayombei

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.