cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.5nve7d
title: Occurrence Download

description: A dataset containing 38762 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Rubus phoenicolasius Maxim., Rubus trifidus var. tomentosus Makino, Rubus phoenicolasius var. albiflorus Nakai ex J.Y.Yang, Rubus phoenicolasius var. concolor Koidz., Rubus phoenicolasius var. albiflorus Nakai, Rubus phoenicolasius var. aureiceps Honda, Rubus phoenicolasius f. albiflorus Nakai ex T.B.Lee, Rubus phoenicolasius f. albiflorus Nakai, Rubus hydrastifolius var. tomentosus (Makino) Matsum., Rubus phoenicolasius f. aureiceps (Honda) Honda)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 38762 records from 128 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011417-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14794844
title: Sample paired datasets for ECLARE analysis

description: Sample paired datasets for ECLARE analysis. Includes snRNA-seq and snATAC-seq data.



Target dataset: PFC_Zhu

Source datasets: DLPFC_Ma, DLPFC_Anderson


Once unzipped, data is organized into subdirectories with the following structure:



for PFC_Zhu:



"PFC_Zhu/<modality>_<genes_by_peaks_str>_aligned_source_<source_dataset>.h5ad"



for DLPFC_Ma:



"DLPFC_Ma/<modality>_<genes_by_peaks_str>_aligned_target_PFC_Zhu.h5ad"

"DLPFC_Ma/genes_to_peaks_binary_mask_<genes_by_peaks_str>_aligned_target_PFC_Zhu.<npz/pkl>"



for DLPFC_Anderson:



"DLPFC_Anderson/<modality>_<genes_by_peaks_str>_aligned_target_PFC_Zhu.h5ad"

"DLPFC_Anderson/genes_to_peaks_binary_mask_<genes_by_peaks_str>_aligned_target_PFC_Zhu.<npz/pkl>"




where <genes_by_peaks_str> is unique to each source-target datasets combination.

 

Datasets were sourced from studies cited in Table 1 of the manuscript. Datasets have then been preprocessed and features aligned across source and target.
DOI: 10.5281/zenodo.14794845
title: Sample paired datasets for ECLARE analysis

description: Sample paired datasets for ECLARE analysis. Includes snRNA-seq and snATAC-seq data.



Target dataset: PFC_Zhu

Source datasets: DLPFC_Ma, DLPFC_Anderson


Once unzipped, data is organized into subdirectories with the following structure:



for PFC_Zhu:



"PFC_Zhu/<modality>_<genes_by_peaks_str>_aligned_source_<source_dataset>.h5ad"



for DLPFC_Ma:



"DLPFC_Ma/<modality>_<genes_by_peaks_str>_aligned_target_PFC_Zhu.h5ad"

"DLPFC_Ma/genes_to_peaks_binary_mask_<genes_by_peaks_str>_aligned_target_PFC_Zhu.<npz/pkl>"



for DLPFC_Anderson:



"DLPFC_Anderson/<modality>_<genes_by_peaks_str>_aligned_target_PFC_Zhu.h5ad"

"DLPFC_Anderson/genes_to_peaks_binary_mask_<genes_by_peaks_str>_aligned_target_PFC_Zhu.<npz/pkl>"




where <genes_by_peaks_str> is unique to each source-target datasets combination.

 

Datasets were sourced from studies cited in Table 1 of the manuscript. Datasets have then been preprocessed and features aligned across source and target.
DOI: 10.5281/zenodo.14796875
title: Sample paired datasets for ECLARE analysis

description: Sample paired datasets for ECLARE analysis. Includes snRNA-seq and snATAC-seq data.



Target dataset: PFC_Zhu

Source datasets: DLPFC_Ma, DLPFC_Anderson


Once unzipped, data is organized into subdirectories with the following structure:



for PFC_Zhu:



"PFC_Zhu/<modality>_<genes_by_peaks_str>_aligned_source_<source_dataset>.h5ad"



for DLPFC_Ma:



"DLPFC_Ma/<modality>_<genes_by_peaks_str>_aligned_target_PFC_Zhu.h5ad"

"DLPFC_Ma/genes_to_peaks_binary_mask_<genes_by_peaks_str>_aligned_target_PFC_Zhu.<npz/pkl>"



for DLPFC_Anderson:



"DLPFC_Anderson/<modality>_<genes_by_peaks_str>_aligned_target_PFC_Zhu.h5ad"

"DLPFC_Anderson/genes_to_peaks_binary_mask_<genes_by_peaks_str>_aligned_target_PFC_Zhu.<npz/pkl>"




where <genes_by_peaks_str> is unique to each source-target datasets combination.

 

Datasets were sourced from studies cited in Table 1 of the manuscript. Datasets have then been preprocessed and features aligned across source and target.
DOI: 10.5281/zenodo.14799100
title: Sample paired datasets for ECLARE analysis

description: Sample paired datasets for ECLARE analysis. Includes snRNA-seq and snATAC-seq data.



Target dataset: PFC_Zhu

Source datasets: DLPFC_Ma, DLPFC_Anderson


Once unzipped, data is organized into subdirectories with the following structure:



for PFC_Zhu:



"PFC_Zhu/<modality>_<genes_by_peaks_str>_aligned_source_<source_dataset>.h5ad"



for DLPFC_Ma:



"DLPFC_Ma/<modality>_<genes_by_peaks_str>_aligned_target_PFC_Zhu.h5ad"

"DLPFC_Ma/genes_to_peaks_binary_mask_<genes_by_peaks_str>_aligned_target_PFC_Zhu.<npz/pkl>"



for DLPFC_Anderson:



"DLPFC_Anderson/<modality>_<genes_by_peaks_str>_aligned_target_PFC_Zhu.h5ad"

"DLPFC_Anderson/genes_to_peaks_binary_mask_<genes_by_peaks_str>_aligned_target_PFC_Zhu.<npz/pkl>"




where <genes_by_peaks_str> is unique to each source-target datasets combination.

 

Datasets were sourced from studies cited in Table 1 of the manuscript. Datasets have then been preprocessed and features aligned across source and target.
DOI: 10.15468/dl.srnnzt
title: Occurrence Download

description: A dataset containing 821520 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Geometry POLYGON((-77.13913 2.05093,-75.91237 1.28817,-73.8979 3.83231,-75.68451 3.77312,-77.13913 2.05093))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 821520 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011346-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8xtqkz
title: Occurrence Download

description: A dataset containing 1993 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Actualización de la base de datos de la Colección Regional Durango (Tejido)"
 ]
}

 The dataset includes 1993 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011420-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.avkd8h
title: Occurrence Download

description: A dataset containing 385 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Cnemathraupis aureodorsalis (Blake & Hocking, 1974)"
 ]
}

 The dataset includes 385 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011421-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10042028
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)


These are the latest version of the UCC database, stored in the UCC_cat.csv.gz file, and the associated members estimated for each of the listed clusters, stored in the UCC_members.parquet.gz file.


The columns listed in UCC_cat are:


ID        : Name(s) associated to the OC
RA_ICRS   : Median RA from the databases this OC is present
DE_ICRS   : Median DEC from the databases this OC is present
plx       : Median parallax from the databases this OC is present
pmRA      : Median RA proper motion from the databases this OC is present
pmDE      : Median DEC proper motion from the databases this OC is present
UCC_ID    : Internal UCC naming
N_50      : Number of estimated members with P>0.5
r_50      : Radius that contains half the members (in arcmin)
RA_ICRS_m : Median RA estimated using the selected members
DE_ICRS_m : Median DEC estimated using the selected members
plx_m     : Median parallax estimated using the selected members
pmRA_m    : Median RA proper motion estimated using the selected members
pmDE_m    : Median DEC proper motion estimated using the selected members
Rv_m      : Median radial velocity estimated using the selected members
N_Rv      : Number of members with Rv data
C1        : C_phot quality class
C2        : C_dens quality class
C3        : C_phot,C_dens, combined quality class
DOI: 10.5281/zenodo.10072846
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)


These are the latest version of the UCC database, stored in the UCC_cat.csv.gz file, and the associated members estimated for each of the listed clusters, stored in the UCC_members.parquet.gz file.


The columns listed in UCC_cat are:


ID        : Name(s) associated to the OC
RA_ICRS   : Median RA from the databases this OC is present
DE_ICRS   : Median DEC from the databases this OC is present
plx       : Median parallax from the databases this OC is present
pmRA      : Median RA proper motion from the databases this OC is present
pmDE      : Median DEC proper motion from the databases this OC is present
UCC_ID    : Internal UCC naming
N_50      : Number of estimated members with P>0.5
r_50      : Radius that contains half the members (in arcmin)
RA_ICRS_m : Median RA estimated using the selected members
DE_ICRS_m : Median DEC estimated using the selected members
plx_m     : Median parallax estimated using the selected members
pmRA_m    : Median RA proper motion estimated using the selected members
pmDE_m    : Median DEC proper motion estimated using the selected members
Rv_m      : Median radial velocity estimated using the selected members
N_Rv      : Number of members with Rv data
C1        : C_phot quality class
C2        : C_dens quality class
C3        : C_phot,C_dens, combined quality class
DOI: 10.5281/zenodo.14025432
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)


These are the latest version of the UCC database, stored in the UCC_cat.csv.gz file, and the associated members estimated for each of the listed clusters, stored in the UCC_members.parquet.gz file.


The columns listed in UCC_cat are:


ID        : Name(s) associated to the OC
RA_ICRS   : Median RA from the databases this OC is present
DE_ICRS   : Median DEC from the databases this OC is present
plx       : Median parallax from the databases this OC is present
pmRA      : Median RA proper motion from the databases this OC is present
pmDE      : Median DEC proper motion from the databases this OC is present
UCC_ID    : Internal UCC naming
N_50      : Number of estimated members with P>0.5
r_50      : Radius that contains half the members (in arcmin)
RA_ICRS_m : Median RA estimated using the selected members
DE_ICRS_m : Median DEC estimated using the selected members
plx_m     : Median parallax estimated using the selected members
pmRA_m    : Median RA proper motion estimated using the selected members
pmDE_m    : Median DEC proper motion estimated using the selected members
Rv_m      : Median radial velocity estimated using the selected members
N_Rv      : Number of members with Rv data
C1        : C_phot quality class
C2        : C_dens quality class
C3        : C_phot,C_dens, combined quality class
DOI: 10.5281/zenodo.14028837
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)


These are the latest version of the UCC database, stored in the UCC_cat.csv.gz file, and the associated members estimated for each of the listed clusters, stored in the UCC_members.parquet.gz file.


The columns listed in UCC_cat are:


ID        : Name(s) associated to the OC
RA_ICRS   : Median RA from the databases this OC is present
DE_ICRS   : Median DEC from the databases this OC is present
plx       : Median parallax from the databases this OC is present
pmRA      : Median RA proper motion from the databases this OC is present
pmDE      : Median DEC proper motion from the databases this OC is present
UCC_ID    : Internal UCC naming
N_50      : Number of estimated members with P>0.5
r_50      : Radius that contains half the members (in arcmin)
RA_ICRS_m : Median RA estimated using the selected members
DE_ICRS_m : Median DEC estimated using the selected members
plx_m     : Median parallax estimated using the selected members
pmRA_m    : Median RA proper motion estimated using the selected members
pmDE_m    : Median DEC proper motion estimated using the selected members
Rv_m      : Median radial velocity estimated using the selected members
N_Rv      : Number of members with Rv data
C1        : C_phot quality class
C2        : C_dens quality class
C3        : C_phot,C_dens, combined quality class
DOI: 10.5281/zenodo.14047628
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)


These are the latest version of the UCC database, stored in the UCC_cat.csv.gz file, and the associated members estimated for each of the listed clusters, stored in the UCC_members.parquet.gz file.


The columns listed in UCC_cat are:


ID        : Name(s) associated to the OC
RA_ICRS   : Median RA from the databases this OC is present
DE_ICRS   : Median DEC from the databases this OC is present
plx       : Median parallax from the databases this OC is present
pmRA      : Median RA proper motion from the databases this OC is present
pmDE      : Median DEC proper motion from the databases this OC is present
UCC_ID    : Internal UCC naming
N_50      : Number of estimated members with P>0.5
r_50      : Radius that contains half the members (in arcmin)
RA_ICRS_m : Median RA estimated using the selected members
DE_ICRS_m : Median DEC estimated using the selected members
plx_m     : Median parallax estimated using the selected members
pmRA_m    : Median RA proper motion estimated using the selected members
pmDE_m    : Median DEC proper motion estimated using the selected members
Rv_m      : Median radial velocity estimated using the selected members
N_Rv      : Number of members with Rv data
C1        : C_phot quality class
C2        : C_dens quality class
C3        : C_phot,C_dens, combined quality class
DOI: 10.5281/zenodo.10632525
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)


These are the latest version of the UCC database, stored in the UCC_cat.csv.gz file, and the associated members estimated for each of the listed clusters, stored in the UCC_members.parquet.gz file.


The columns listed in UCC_cat are:


ID        : Name(s) associated to the OC
RA_ICRS   : Median RA from the databases this OC is present
DE_ICRS   : Median DEC from the databases this OC is present
plx       : Median parallax from the databases this OC is present
pmRA      : Median RA proper motion from the databases this OC is present
pmDE      : Median DEC proper motion from the databases this OC is present
UCC_ID    : Internal UCC naming
N_50      : Number of estimated members with P>0.5
r_50      : Radius that contains half the members (in arcmin)
RA_ICRS_m : Median RA estimated using the selected members
DE_ICRS_m : Median DEC estimated using the selected members
plx_m     : Median parallax estimated using the selected members
pmRA_m    : Median RA proper motion estimated using the selected members
pmDE_m    : Median DEC proper motion estimated using the selected members
Rv_m      : Median radial velocity estimated using the selected members
N_Rv      : Number of members with Rv data
C1        : C_phot quality class
C2        : C_dens quality class
C3        : C_phot,C_dens, combined quality class
DOI: 10.5281/zenodo.10779488
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)


These are the latest version of the UCC database, stored in the UCC_cat.csv.gz file, and the associated members estimated for each of the listed clusters, stored in the UCC_members.parquet.gz file.


The columns listed in UCC_cat are:


ID        : Name(s) associated to the OC
RA_ICRS   : Median RA from the databases this OC is present
DE_ICRS   : Median DEC from the databases this OC is present
plx       : Median parallax from the databases this OC is present
pmRA      : Median RA proper motion from the databases this OC is present
pmDE      : Median DEC proper motion from the databases this OC is present
UCC_ID    : Internal UCC naming
N_50      : Number of estimated members with P>0.5
r_50      : Radius that contains half the members (in arcmin)
RA_ICRS_m : Median RA estimated using the selected members
DE_ICRS_m : Median DEC estimated using the selected members
plx_m     : Median parallax estimated using the selected members
pmRA_m    : Median RA proper motion estimated using the selected members
pmDE_m    : Median DEC proper motion estimated using the selected members
Rv_m      : Median radial velocity estimated using the selected members
N_Rv      : Number of members with Rv data
C1        : C_phot quality class
C2        : C_dens quality class
C3        : C_phot,C_dens, combined quality class
DOI: 10.5281/zenodo.14782856
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)

See README.txt
DOI: 10.5281/zenodo.10015787
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)


These are the latest version of the UCC database, stored in the UCC_cat.csv.gz file, and the associated members estimated for each of the listed clusters, stored in the UCC_members.parquet.gz file.


The columns listed in UCC_cat are:


ID        : Name(s) associated to the OC
RA_ICRS   : Median RA from the databases this OC is present
DE_ICRS   : Median DEC from the databases this OC is present
plx       : Median parallax from the databases this OC is present
pmRA      : Median RA proper motion from the databases this OC is present
pmDE      : Median DEC proper motion from the databases this OC is present
UCC_ID    : Internal UCC naming
N_50      : Number of estimated members with P>0.5
r_50      : Radius that contains half the members (in arcmin)
RA_ICRS_m : Median RA estimated using the selected members
DE_ICRS_m : Median DEC estimated using the selected members
plx_m     : Median parallax estimated using the selected members
pmRA_m    : Median RA proper motion estimated using the selected members
pmDE_m    : Median DEC proper motion estimated using the selected members
Rv_m      : Median radial velocity estimated using the selected members
N_Rv      : Number of members with Rv data
C1        : C_phot quality class
C2        : C_dens quality class
C3        : C_phot,C_dens, combined quality class
DOI: 10.5281/zenodo.10028579
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)


These are the latest version of the UCC database, stored in the UCC_cat.csv.gz file, and the associated members estimated for each of the listed clusters, stored in the UCC_members.parquet.gz file.


The columns listed in UCC_cat are:


ID        : Name(s) associated to the OC
RA_ICRS   : Median RA from the databases this OC is present
DE_ICRS   : Median DEC from the databases this OC is present
plx       : Median parallax from the databases this OC is present
pmRA      : Median RA proper motion from the databases this OC is present
pmDE      : Median DEC proper motion from the databases this OC is present
UCC_ID    : Internal UCC naming
N_50      : Number of estimated members with P>0.5
r_50      : Radius that contains half the members (in arcmin)
RA_ICRS_m : Median RA estimated using the selected members
DE_ICRS_m : Median DEC estimated using the selected members
plx_m     : Median parallax estimated using the selected members
pmRA_m    : Median RA proper motion estimated using the selected members
pmDE_m    : Median DEC proper motion estimated using the selected members
Rv_m      : Median radial velocity estimated using the selected members
N_Rv      : Number of members with Rv data
C1        : C_phot quality class
C2        : C_dens quality class
C3        : C_phot,C_dens, combined quality class
DOI: 10.5281/zenodo.11179393
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)


These are the latest version of the UCC database, stored in the UCC_cat.csv.gz file, and the associated members estimated for each of the listed clusters, stored in the UCC_members.parquet.gz file.


The columns listed in UCC_cat are:


ID        : Name(s) associated to the OC
RA_ICRS   : Median RA from the databases this OC is present
DE_ICRS   : Median DEC from the databases this OC is present
plx       : Median parallax from the databases this OC is present
pmRA      : Median RA proper motion from the databases this OC is present
pmDE      : Median DEC proper motion from the databases this OC is present
UCC_ID    : Internal UCC naming
N_50      : Number of estimated members with P>0.5
r_50      : Radius that contains half the members (in arcmin)
RA_ICRS_m : Median RA estimated using the selected members
DE_ICRS_m : Median DEC estimated using the selected members
plx_m     : Median parallax estimated using the selected members
pmRA_m    : Median RA proper motion estimated using the selected members
pmDE_m    : Median DEC proper motion estimated using the selected members
Rv_m      : Median radial velocity estimated using the selected members
N_Rv      : Number of members with Rv data
C1        : C_phot quality class
C2        : C_dens quality class
C3        : C_phot,C_dens, combined quality class
DOI: 10.5281/zenodo.14801947
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)

See README.txt
DOI: 10.5281/zenodo.8250524
title: The Unified Cluster Catalogue

description: The Unified Cluster Catalogue (UCC)


These are the latest version of the UCC database, stored in the UCC_cat.csv.gz file, and the associated members estimated for each of the listed clusters, stored in the UCC_members.parquet.gz file.


The columns listed in UCC_cat are:


ID        : Name(s) associated to the OC
RA_ICRS   : Median RA from the databases this OC is present
DE_ICRS   : Median DEC from the databases this OC is present
plx       : Median parallax from the databases this OC is present
pmRA      : Median RA proper motion from the databases this OC is present
pmDE      : Median DEC proper motion from the databases this OC is present
UCC_ID    : Internal UCC naming
N_50      : Number of estimated members with P>0.5
r_50      : Radius that contains half the members (in arcmin)
RA_ICRS_m : Median RA estimated using the selected members
DE_ICRS_m : Median DEC estimated using the selected members
plx_m     : Median parallax estimated using the selected members
pmRA_m    : Median RA proper motion estimated using the selected members
pmDE_m    : Median DEC proper motion estimated using the selected members
Rv_m      : Median radial velocity estimated using the selected members
N_Rv      : Number of members with Rv data
C1        : C_phot quality class
C2        : C_dens quality class
C3        : C_phot,C_dens, combined quality class