cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.fq53xp
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Allium caespitosum Siev. ex Bong. & C.A.Mey."
 ]
}

 The dataset includes 22 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0179644-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.whriwq
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Protozoa",
 "DecimalLatitude is greater than 41.8117934308913",
 "DecimalLatitude is less than 42.39502718937",
 "DecimalLongitude is greater than -123.800298398941",
 "DecimalLongitude is less than -122.997850496741"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007345-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aarclw
title: Occurrence Download

description: A dataset containing 550 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((2.78680 29.00019,45.21320 29.00019,45.21320 45.99981,2.78680 45.99981,2.78680 29.00019))",
 "HasCoordinate is true",
 "TaxonKey is Silene succulenta Forssk.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 550 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004475-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yighva
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bothrops sanctaecrucis Hoge, 1966"
 ]
}

 The dataset includes 43 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007345-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6yjahp
title: Occurrence Download

description: A dataset containing 141 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Spain",
 "Country is Portugal"
 ]
 },
 "TaxonKey is Acarospora nodulosa"
 ]
}

 The dataset includes 141 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070475-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g47uef
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Colombia",
 "TaxonKey is Cochranella euknemos (Savage & Starrett, 1967)"
 ]
}

 The dataset includes 44 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057932-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ppxdvp
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Iceland",
 "TaxonKey is Mustela vison Schreber, 1777"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004475-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bz2f8k
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is China",
 "Country is Hong Kong",
 "Country is Chinese Taipei"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Pseudocalotes kingdonwardi (Smith, 1935)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 27 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007345-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xsjnvb
title: Occurrence Download

description: A dataset containing 4318 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Registro de Fauna Silvestre en el Inventario Nacional Forestal y de Fauna Silvestre-SERFOR, Perú"
 ]
}

 The dataset includes 4318 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073544-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.97kpy0
title: Occurrence Download

description: A dataset containing 401 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Pomacea canaliculata (Lamarck, 1822)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 401 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004475-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t1ex3o
title: Occurrence Download

description: A dataset containing 253 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Issue is Zero coordinate",
 "Issue is Coordinate out of range",
 "Issue is Coordinate invalid",
 "Issue is Coordinate rounded",
 "Issue is Geodetic datum invalid",
 "Issue is Geodetic datum assumed WGS84",
 "Issue is Coordinate reprojected",
 "Issue is Coordinate reprojection failed",
 "Issue is Coordinate reprojection suspicious",
 "Issue is Coordinate accuracy invalid",
 "Issue is Coordinate precision invalid",
 "Issue is Coordinate uncertainty meters invalid",
 "Issue is Coordinate precision/uncertainty mismatch",
 "Issue is Country coordinate mismatch",
 "Issue is Country mismatch",
 "Issue is Country invalid",
 "Issue is Country derived from coordinates",
 "Issue is Continent country mismatch",
 "Issue is Continent invalid",
 "Issue is Continent derived from coordinates",
 "Issue is Presumed swapped coordinate",
 "Issue is Presumed negated longitude",
 "Issue is Presumed negated latitude",
 "Issue is Recorded date mismatch",
 "Issue is Recorded date invalid",
 "Issue is Recorded date unlikely",
 "Issue is Taxon match fuzzy",
 "Issue is Taxon match higher rank",
 "Issue is Taxon match none",
 "Issue is Depth not metric",
 "Issue is Depth unlikely",
 "Issue is Depth min max swapped",
 "Issue is Depth non numeric",
 "Issue is Elevation unlikely",
 "Issue is Elevation min max swapped",
 "Issue is Elevation not metric",
 "Issue is Elevation non numeric",
 "Issue is Modified date invalid",
 "Issue is Modified date unlikely",
 "Issue is Identified date invalid",
 "Issue is Basis of record invalid",
 "Issue is Type status invalid",
 "Issue is Multimedia date invalid",
 "Issue is Multimedia URI invalid",
 "Issue is References URI invalid",
 "Issue is Error during interpretation",
 "Issue is Individual count invalid"
 ]
 },
 "TaxonKey is Drosera madagascariensis DC."
 ]
}

 The dataset includes 253 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007345-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yotl5w
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "TaxonKey is Pinus coulteri D.Don",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 30 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005820-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eyxxdb
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Haplopappus ochagavianus Phil."
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004475-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0oa0ec
title: Occurrence Download

description: A dataset containing 141664 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation"
 ]
 },
 "Year 2014-2019",
 "HasCoordinate is true",
 "TaxonKey is Passerina amoena (Say, 1822)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 141664 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007345-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a7w63u
title: Occurrence Download

description: A dataset containing 7679 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Carex hartmanii Cajander"
 ]
}

 The dataset includes 7679 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0196877-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8mptzm
title: Occurrence Download

description: A dataset listing the 25445 species recorded in GBIF matching the query:
{
 "Country" : [
 "is Nepal"
 ]
}

 The dataset's 25445 records were derived from 626 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013312-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mgj4us
title: Occurrence Download

description: A dataset containing 257 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Delias hyparete",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 257 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020682-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uj5ja6
title: Occurrence Download

description: A dataset containing 12596 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plasmodium"
 ]
}

 The dataset includes 12596 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020684-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5yzfzt
title: Occurrence Download

description: A dataset containing 56869 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Slovenia",
 "DatasetKey is one of (Invazivke - Invasive Alien Species in Slovenia, Pl@ntNet automatically identified occurrences, iNaturalist Research-grade Observations, FloVegSI-FAV - Faunistical database of ZRC SAZU, FloVegSI - Floristical and fitocenological database of ZRC SAZU, Pl@ntNet observations)",
 "Geometry POLYGON((14.29491 45.82409,14.6717 45.82409,14.6717 46.17579,14.29491 46.17579,14.29491 45.82409))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 56869 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020674-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17200603
title: Metadata for refining Breast Cancer Immunohistochemistry image generation challenge data at patch-level
title: BCI-metadata-LMG

description: # Refined HER2 Annotations for BCI Dataset

This repository contains a metadata file listing paired HE/IHC image filenames from the original **BCI Dataset**, along with **refined HER2 annotations** based on expert pathological review.

## 📁 File Contents

**Filename**: `BCI_metadata_pairs_refined.csv`

| Column             | Description                                                                 ||--------------------|-----------------------------------------------------------------------------|| `pair_id`          | Unique identifier for each image pair                                       || `partition`        | Data split (`train` or `test`)                                              || `file_name_he`     | Filename of the HE image (as in original BCI dataset)                       || `file_name_ihc`    | Filename of the IHC image (as in original BCI dataset)                      || `her2_level`       | Refined HER2 category (`0`, `1+`, `2+`, `3+`) based on pathologist revision of the patch |

## 🧠 Purpose

This metadata provides updated HER2 annotations for a subset of the BCI Dataset, filtered and reviewed by a professional pathologist. It is intended to improve training, benchmarking, and reproducibility in research using BCI-based histopathological image analysis.

## ⚠️ Important Notes

- **No image data is included** in this repository.- Filenames refer to the original BCI Dataset, which must be obtained separately.- HER2 levels included here are revised annotations at patch-level, not the original labels from the dataset (at WSI-level).

## 📚 Citation Requirements

If you use this metadata, you **must also cite**:

1. **The original dataset**:

    ```bibtex    @article{liu2022bci,      title={BCI: Breast Cancer Immunohistochemical Image Generation through Pyramid Pix2pix},      author={Liu, Shengjie and Zhu, Chuang and Xu, Feng and Jia, Xinyu and Shi, Zhongyue and Jin, Mulan},      journal={arXiv preprint arXiv:2204.11425},      year={2022}    }    ```

2. **This metadata resource** (Zenodo DOI), as the source of the refined patch-level HER2 annotations. Please include the DOI of this Zenodo record in any publication or derived work.

## 📝 License

This metadata is provided under the **Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)** license.  It is intended for **non-commercial academic use only**. Redistribution or use of the original image data must comply with the license of the original BCI Dataset.

## ✉️ Contact

For questions or collaboration inquiries, please contact the maintainers via the Zenodo page or institutional email.
DOI: 10.5281/zenodo.17200604
title: Metadata for refining Breast Cancer Immunohistochemistry image generation challenge data at patch-level
title: BCI-metadata-LMG

description: # Refined HER2 Annotations for BCI Dataset

This repository contains a metadata file listing paired HE/IHC image filenames from the original **BCI Dataset**, along with **refined HER2 annotations** based on expert pathological review.

## 📁 File Contents

**Filename**: `BCI_metadata_pairs_refined.csv`

| Column             | Description                                                                 ||--------------------|-----------------------------------------------------------------------------|| `pair_id`          | Unique identifier for each image pair                                       || `partition`        | Data split (`train` or `test`)                                              || `file_name_he`     | Filename of the HE image (as in original BCI dataset)                       || `file_name_ihc`    | Filename of the IHC image (as in original BCI dataset)                      || `her2_level`       | Refined HER2 category (`0`, `1+`, `2+`, `3+`) based on pathologist revision of the patch |

## 🧠 Purpose

This metadata provides updated HER2 annotations for a subset of the BCI Dataset, filtered and reviewed by a professional pathologist. It is intended to improve training, benchmarking, and reproducibility in research using BCI-based histopathological image analysis.

## ⚠️ Important Notes

- **No image data is included** in this repository.- Filenames refer to the original BCI Dataset, which must be obtained separately.- HER2 levels included here are revised annotations at patch-level, not the original labels from the dataset (at WSI-level).

## 📚 Citation Requirements

If you use this metadata, you **must also cite**:

1. **The original dataset**:

    ```bibtex    @article{liu2022bci,      title={BCI: Breast Cancer Immunohistochemical Image Generation through Pyramid Pix2pix},      author={Liu, Shengjie and Zhu, Chuang and Xu, Feng and Jia, Xinyu and Shi, Zhongyue and Jin, Mulan},      journal={arXiv preprint arXiv:2204.11425},      year={2022}    }    ```

2. **This metadata resource** (Zenodo DOI), as the source of the refined patch-level HER2 annotations. Please include the DOI of this Zenodo record in any publication or derived work.

## 📝 License

This metadata is provided under the **Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)** license.  It is intended for **non-commercial academic use only**. Redistribution or use of the original image data must comply with the license of the original BCI Dataset.

## ✉️ Contact

For questions or collaboration inquiries, please contact the maintainers via the Zenodo page or institutional email.
DOI: 10.15468/dl.at9nz5
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Drosophila malerkotliana",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 27 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020686-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bf6sur
title: Occurrence Download

description: A dataset containing 342 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Delias pasithoe",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 342 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020685-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5wjvc3
title: Occurrence Download

description: A dataset containing 63527 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aedes aegypti"
 ]
}

 The dataset includes 63527 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020638-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zck8zp
title: Occurrence Download

description: A dataset containing 5794 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is USGS ASC - Copper River Delta - Birds - 1997-2005"
 ]
}

 The dataset includes 5794 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020687-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/zyrcjhwp6p
title: Initiatives to support nursing workforce sustainability: Rapid umbrella review extraction data

description: This umbrella review aimed to identify structures that healthcare systems have put in place to stabilize, support, and provide for the sustained enhancement of the nursing workforce, as well as highlight outstanding knowledge gaps.
 
Following screening, we selected 69 studies for inclusion, the majority of which investigated interventions classified as implementation strategies (n=60) or delivery arrangements (n=8) under EPOC taxonomy. We identified heterogeneity in terms of the types of structures identified across reviews and the methods used for their evaluation.

The findings of this umbrella review suggest that there is no one-size-fits-all approach for supporting the nursing workforce; rather, a multi-level, multi-pronged approach may be more appropriate to collectively have the most impactful outcomes. Limitations of this review include the phenomenon of interest (structures) being difficult to define and the inability to capture recently published primary sources. Future studies should incorporate rigorous implementation and evaluation plans, focusing on the long-term impacts of such strategies, and prioritize the dissemination of learnings.
DOI: 10.17632/zyrcjhwp6p.2
title: Initiatives to support nursing workforce sustainability: Rapid umbrella review extraction data

description: This umbrella review aimed to identify structures that healthcare systems have put in place to stabilize, support, and provide for the sustained enhancement of the nursing workforce, as well as highlight outstanding knowledge gaps.
 
Following screening, we selected 69 studies for inclusion, the majority of which investigated interventions classified as implementation strategies (n=60) or delivery arrangements (n=8) under EPOC taxonomy. We identified heterogeneity in terms of the types of structures identified across reviews and the methods used for their evaluation.

The findings of this umbrella review suggest that there is no one-size-fits-all approach for supporting the nursing workforce; rather, a multi-level, multi-pronged approach may be more appropriate to collectively have the most impactful outcomes. Limitations of this review include the phenomenon of interest (structures) being difficult to define and the inability to capture recently published primary sources. Future studies should incorporate rigorous implementation and evaluation plans, focusing on the long-term impacts of such strategies, and prioritize the dissemination of learnings.
DOI: 10.15468/dl.k9p294
title: Occurrence Download

description: A dataset containing 1825 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helicteres baruensis",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1825 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020680-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.