cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.8mm4za
title: Occurrence Download

description: A dataset containing 1073 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hypsiboas punctatus (Schneider, 1799)"
 ]
}

 The dataset includes 1073 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069804-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ketjwn
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dianella saffordiana Fosberg & Sachet"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025845-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wp7bys
title: Occurrence Download

description: A dataset containing 4964 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Buthraupis montana (d'Orbigny & Lafresnaye, 1837)"
 ]
}

 The dataset includes 4964 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007544-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fjp4jd
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aeschynanthus miniaceus B.L.Burtt & P.Woods"
 ]
}

 The dataset includes 18 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017458-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jrxtee
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dianthus afghanicus Rech.fil."
 ]
}

 The dataset includes 83 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025940-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ommnyq
title: Occurrence Download

description: A dataset containing 2877 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thalictrum fendleri Engelm. ex A.Gray"
 ]
}

 The dataset includes 2877 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010561-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s55cb4
title: Occurrence Download

description: A dataset containing 1820 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Peucaea sumichrasti (Lawrence, 1871)"
 ]
}

 The dataset includes 1820 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042543-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hwa5ww
title: Occurrence Download

description: A dataset containing 2894 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Paradisaea minor Shaw, 1809"
 ]
}

 The dataset includes 2894 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025810-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.o87lvr
title: Occurrence Download

description: A dataset containing 918078 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bombus Latreille, 1802"
 ]
}

 The dataset includes 918078 records from 570 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007545-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c726tt
title: Occurrence Download

description: A dataset containing 176 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cacopsylla pyri (Linnaeus, 1758)"
 ]
}

 The dataset includes 176 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004124-240130105604617/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sjpw8m
title: Occurrence Download

description: A dataset containing 2337 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Manucodia ater (Lesson, 1830)"
 ]
}

 The dataset includes 2337 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025824-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bpdyhh
title: Occurrence Download

description: A dataset containing 1033234 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is one of (United Kingdom of Great Britain and Northern Ireland, Finland, France, Sweden, Netherlands, Norway, Belgium, Germany, Switzerland, Austria, Spain, Italy, Portugal, Iceland, Denmark, Liechtenstein, Luxembourg, Poland, Czechia, Ireland, Estonia, Slovakia, Slovenia, Latvia, Lithuania, Hungary, Croatia, Greece, Serbia, North Macedonia, Albania, Montenegro, Kosovo, Bosnia and Herzegovina, Romania, Bulgaria, Belarus, Moldova, Republic of, Isle of Man, Andorra, Ukraine)",
 "Geometry POLYGON((-20 20,60 20,60 72,-20 72,-20 20))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Artiodactyla",
 "Year 1950-2014"
 ]
}

 The dataset includes 1033234 records from 1193 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047750-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.89k5he
title: Occurrence Download

description: A dataset containing 822 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eryngium viviparum J.Gay"
 ]
}

 The dataset includes 822 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010306-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pc45rx
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera leo persica (Meyer, 1826)"
 ]
}

 The dataset includes 45 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010307-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ffke86
title: Occurrence Download

description: A dataset containing 1536 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trachemys scripta (Thunberg In Schoepff, 1792)",
 "Country is Japan",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 1536 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010308-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.734vz2
title: Occurrence Download

description: A dataset containing 230 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sophora japonica L.",
 "Year 1970-2000"
 ]
}

 The dataset includes 230 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010309-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14097549
title: acanthocercus_annectans_spades_01.fasta.gz
DOI: 10.5281/zenodo.14097550
title: acanthocercus_annectans_spades_01.fasta.gz
DOI: 10.15468/dl.5apnsu
title: Occurrence Download

description: A dataset containing 5037 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eryngium foetidum L."
 ]
}

 The dataset includes 5037 records from 299 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010310-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hb3gjd
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eryngium atlanticum Batt. & Pit."
 ]
}

 The dataset includes 85 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010311-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.75r3qd
title: Occurrence Download

description: A dataset containing 823 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eryngium galioides Lam."
 ]
}

 The dataset includes 823 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010312-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wvm8vy
title: Occurrence Download

description: A dataset containing 265 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pinus virginiana Mill.",
 "Year 1970-2000"
 ]
}

 The dataset includes 265 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010313-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gcq7rd
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eryngium marocanum Pit."
 ]
}

 The dataset includes 81 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010314-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k73p2k
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trachemys scripta (Thunberg In Schoepff, 1792)",
 "Country is Martinique",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 58 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010315-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r253bk
title: Occurrence Download

description: A dataset containing 1330 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eryngium pandanifolium Cham. & Schltdl."
 ]
}

 The dataset includes 1330 records from 134 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010316-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.ccsy4wq
title: CCDC 743004: Experimental Crystal Structure Determination

description: Related Article: Mikhail Gorlov, David Hess, Andreas Fischer and Lars Kloo|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.ccsy4zt
title: CCDC 743007: Experimental Crystal Structure Determination

description: Related Article: Mikhail Gorlov, David Hess, Andreas Fischer and Lars Kloo|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.ccsy4xr
title: CCDC 743005: Experimental Crystal Structure Determination

description: Related Article: Mikhail Gorlov, David Hess, Andreas Fischer and Lars Kloo|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.dmnkqe
title: Occurrence Download

description: A dataset containing 698 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lilaeopsis carolinensis J.M.Coult. & Rose"
 ]
}

 The dataset includes 698 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010317-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.872phu
title: Occurrence Download

description: A dataset containing 303 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Litsea coreana var. sinensis (C.K.Allen) Yen C.Yang & P.H.Huang"
 ]
}

 The dataset includes 303 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010318-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27194769
title: <b>Identification and expression analysis of fruit weight loci in italian plum (</b><b><i>Prunus domestica</i></b><b> L.) varieties</b>

description: ddRAD sequencing data
DOI: 10.6084/m9.figshare.27194769.v2
title: <b>Identification and expression analysis of fruit weight loci in italian plum (</b><b><i>Prunus domestica</i></b><b> L.) varieties</b>

description: ddRAD sequencing data
DOI: 10.15468/dl.v33cqm
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trachemys scripta (Thunberg In Schoepff, 1792)",
 "Country is New Caledonia",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010320-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27194769.v1
title: <b>Untitled Identification of cell number and size regulator genes involved in the control of fruit weight in </b><b><i>Prunus domestica</i></b><b> L.</b>

description: ddRAD sequencing data
DOI: 10.5281/zenodo.14054837
title: Source data for publication "Bacteria use exogenous peptidoglycan as a danger signal to trigger biofilm formation"

description: This dataset contains the source data for the figures in the following publication: 

Title: Bacteria use exogenous peptidoglycan as a danger signal to trigger biofilm formation

Authors: Sanika Vaidya, Dibya Saha, Daniel K.H. Rode, Gabriel Torrens, Mads F. Hansen, Praveen K. Singh, Eric Jelli, Kazuki Nosho, Hannah Jeckel, Stephan Göttig, Felipe Cava, Knut Drescher

Journal: Nature Microbiology, 2025

 

Description of the dataset: 

The data is organized by figures in the publication receferenced above. For each figure, there is a XLSX-file that contains the processed data and a ZIP-archive that contains the raw image data. The ZIP-archive also contains readme documents with more detailed descriptions for every set of raw image data. 

Example: For Figure 1 in the main text of the publication, there following data are available:



raw data: Figure_01.zip

processed data: Processed_Source_Data_Figure1.xlsx


Similarly, XLSX-files and ZIP-archives are available for the main text Figures 1-6. For the Extended Data (ED) Figures 1-10, there are XLSX-files available that present the data shown in each figure. Only some of the Extended Data Figures present results based on image data - therefore raw image data ZIP-archives are only available for ED Figures 3, 6, 7, 8, 9, 10.
DOI: 10.25345/c5b853w1n
title: MassIVE MSV000096387 - Integral activity-based protein profiling proteomics data for targets of organophosphate pesticides in rodent tissues
title: These activity-based protein profiling (ABPP) datasets contain protein identifications from rodent tissues (mouse lung, rat brain) treated in vitro with organophosphate pesticides (paraoxon, chlorpyrifos oxon, and malaoxon) followed by labeling with a fluorophophosphonate activity-based probe, FP2. ABPP-TMT optimization samples are also included for rat brain and liver tissue, treated with paraoxon and labeled with FP2 and a dialkynyl phosphate ester probe, PODA. Biotin was attached to probe-labeled proteins using click chemistry and target proteins were enriched on streptavidin beads. On-bead digest with trypsin yielded peptides for analysis by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS processing pipeline.
DOI: 10.15468/dl.xspx4v
title: Occurrence Download

description: A dataset containing 700 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hemitriccus kaempferi (Zimmer, 1953))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 700 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010321-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ey43ud
title: Occurrence Download

description: A dataset containing 76048 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oenanthe aquatica (L.) Poir."
 ]
}

 The dataset includes 76048 records from 570 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010319-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vka9zs
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trialeurodes vaporariorum (Westwood, 1856)",
 "Country is United States of America",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 49 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010323-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c3smzr
title: Occurrence Download

description: A dataset containing 79950 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oenanthe crocata L."
 ]
}

 The dataset includes 79950 records from 557 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010322-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.drh2yd
title: Occurrence Download

description: A dataset containing 681 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hippocampus bargibanti Whitley, 1970"
 ]
}

 The dataset includes 681 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033657-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uu7sh0
title: Occurrence Download

description: A dataset containing 9369 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "Geometry POLYGON((-105.540161 24.136728,-105.540161 23.629427,-103.974609 23.629427,-103.974609 24.136728,-105.540161 24.136728))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9369 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005632-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rukub5
title: Occurrence Download

description: A dataset containing 197 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cuapetes elegans (Paul'son, 1875)"
 ]
}

 The dataset includes 197 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053919-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kkr2h7
title: Occurrence Download

description: A dataset containing 10516 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Osmia coloradensis Cresson, 1878",
 "TaxonKey is Megachile inimica Cresson, 1872",
 "TaxonKey is Megachile melanophaea Smith, 1853",
 "TaxonKey is Megachile relativa Cresson, 1878",
 "TaxonKey is Megachile lippiae Cockerell, 1900",
 "TaxonKey is Megachile fidelis Cresson, 1878",
 "TaxonKey is Osmia bucephala Cresson, 1864",
 "TaxonKey is Megachile pugnata Say, 1837",
 "TaxonKey is Megachile comata Cresson, 1872",
 "TaxonKey is Megachile policaris Say, 1831",
 "TaxonKey is Megachile subexilis Cockerell, 1908",
 "TaxonKey is Megachile montivaga Cresson, 1878",
 "TaxonKey is Megachile texana Cresson, 1878",
 "TaxonKey is Megachile mellitarsis Cresson, 1878",
 "TaxonKey is Megachile frigida Smith, 1853"
 ]
 },
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10516 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005632-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.