cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27915465.v1
title: Additional file 2 of Identification of a terpene synthase arsenal using long-read sequencing and genome assembly of Aspergillus wentii

description: Supplementary Material 2. Supplementary Dataset 1: Gene ontology analysis generated through Eggnog-mapper on the predicted proteome.
DOI: 10.6084/m9.figshare.27915468
title: Additional file 3 of Identification of a terpene synthase arsenal using long-read sequencing and genome assembly of Aspergillus wentii

description: Supplementary Material 3. Supplementary Dataset 2: Summary of detected biosynthetic gene clusters defined by antiSMASH.
DOI: 10.6084/m9.figshare.27915468.v1
title: Additional file 3 of Identification of a terpene synthase arsenal using long-read sequencing and genome assembly of Aspergillus wentii

description: Supplementary Material 3. Supplementary Dataset 2: Summary of detected biosynthetic gene clusters defined by antiSMASH.
DOI: 10.6084/m9.figshare.27915474
title: Additional file 5 of Identification of a terpene synthase arsenal using long-read sequencing and genome assembly of Aspergillus wentii

description: Supplementary Material 5. Supplementary Dataset 4: List of 39 characterised terpene synthases from other fungal species used for phylogeny analysis.
DOI: 10.6084/m9.figshare.27915474.v1
title: Additional file 5 of Identification of a terpene synthase arsenal using long-read sequencing and genome assembly of Aspergillus wentii

description: Supplementary Material 5. Supplementary Dataset 4: List of 39 characterised terpene synthases from other fungal species used for phylogeny analysis.
DOI: 10.15468/dl.hgxcqu
title: Occurrence Download

description: A dataset containing 60588 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "Country is one of (New Zealand)",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 },
 {
 "and" : [
 "PublishingOrg is one of (6b2f029b-7823-4b84-9c30-31ff364238fe)",
 "CollectionCode is one of (CHR, NZAC, ICMP, PDD)",
 "MediaType is one of (Image)"
 ]
 }
 ]
}

 The dataset includes 60588 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001340-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27915497
title: Additional file 2 of Genome-aware annotation of CRISPR guides validates targets in variant cell lines and enhances discovery in screens

description: Additional file 2: Tables. Source and supporting data for the figures.
DOI: 10.6084/m9.figshare.27915497.v1
title: Additional file 2 of Genome-aware annotation of CRISPR guides validates targets in variant cell lines and enhances discovery in screens

description: Additional file 2: Tables. Source and supporting data for the figures.
DOI: 10.6084/m9.figshare.27915511
title: Additional file 2 of Urinary metabolomics provide insights into coronary artery disease in individuals with type 1 diabetes

description: Additional file 2.
DOI: 10.6084/m9.figshare.27915511.v1
title: Additional file 2 of Urinary metabolomics provide insights into coronary artery disease in individuals with type 1 diabetes

description: Additional file 2.
DOI: 10.6084/m9.figshare.27915535.v1
title: Additional file 2 of Methylation changes and INS-IGF2 expression predict progression in early-stage Wilms tumor

description: Additional file 2.
DOI: 10.6084/m9.figshare.27915535
title: Additional file 2 of Methylation changes and INS-IGF2 expression predict progression in early-stage Wilms tumor

description: Additional file 2.
DOI: 10.6084/m9.figshare.27915538
title: Additional file 3 of Methylation changes and INS-IGF2 expression predict progression in early-stage Wilms tumor

description: Additional file 3.
DOI: 10.6084/m9.figshare.27915538.v1
title: Additional file 3 of Methylation changes and INS-IGF2 expression predict progression in early-stage Wilms tumor

description: Additional file 3.
DOI: 10.6084/m9.figshare.27915516
title: Additional file 8 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 8. Table S1 List of functional features in the Maribacter phage Panino genome.
DOI: 10.6084/m9.figshare.27915516.v1
title: Additional file 8 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 8. Table S1 List of functional features in the Maribacter phage Panino genome.
DOI: 10.6084/m9.figshare.27915519
title: Additional file 9 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 9. Table S2 List of related reference phages in the VipTree database with their genomic features, associated metadata, and similarity scores to Maribacter phage Panino.
DOI: 10.6084/m9.figshare.27915519.v1
title: Additional file 9 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 9. Table S2 List of related reference phages in the VipTree database with their genomic features, associated metadata, and similarity scores to Maribacter phage Panino.
DOI: 10.6084/m9.figshare.27915522
title: Additional file 10 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 10. Table S3 List of all bacterial strains used in the Maribacter phage Panino host range test, from publicly available and the private H. panicea strain collection, with associated metadata and 16S rRNA nucleotide sequence accessions.
DOI: 10.6084/m9.figshare.27915522.v1
title: Additional file 10 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 10. Table S3 List of all bacterial strains used in the Maribacter phage Panino host range test, from publicly available and the private H. panicea strain collection, with associated metadata and 16S rRNA nucleotide sequence accessions.
DOI: 10.6084/m9.figshare.27915525
title: Additional file 11 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 11. Table S4 Results of the two-way Analysis of Variance (ANOVA), Linear Mixed Model (LMM), and individual linear regression models, testing the effect of time and individual phage treatments on culturable abundance (CFU counts).
DOI: 10.6084/m9.figshare.27915525.v1
title: Additional file 11 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 11. Table S4 Results of the two-way Analysis of Variance (ANOVA), Linear Mixed Model (LMM), and individual linear regression models, testing the effect of time and individual phage treatments on culturable abundance (CFU counts).
DOI: 10.6084/m9.figshare.27915528
title: Additional file 12 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 12. Table S5 Results of the within-treatment one-way repeated measures ANOVA and between-treatment Welch's one-way ANOVA for effects of time and individual phage treatments on culturable abundance (CFU counts).
DOI: 10.6084/m9.figshare.27915528.v1
title: Additional file 12 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 12. Table S5 Results of the within-treatment one-way repeated measures ANOVA and between-treatment Welch's one-way ANOVA for effects of time and individual phage treatments on culturable abundance (CFU counts).
DOI: 10.6084/m9.figshare.27915531.v1
title: Additional file 13 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 13. Table S6 Results of the within-treatment repeated measures Friedman rank sum test and between-treatment Wilcoxon signed-rank test for effects of time and individual phage treatments on alpha diversity (Chao1 index).
DOI: 10.6084/m9.figshare.27915531
title: Additional file 13 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 13. Table S6 Results of the within-treatment repeated measures Friedman rank sum test and between-treatment Wilcoxon signed-rank test for effects of time and individual phage treatments on alpha diversity (Chao1 index).
DOI: 10.6084/m9.figshare.27915534
title: Additional file 14 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 14. Table S7 Results of the within-treatment repeated measures Friedman rank sum test and between-treatment Kruskal–Wallis one-way ANOVA test for effects of time and grouped phage treatments on alpha diversity measures (Count, Chao1, Shannon).
DOI: 10.6084/m9.figshare.27915534.v1
title: Additional file 14 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 14. Table S7 Results of the within-treatment repeated measures Friedman rank sum test and between-treatment Kruskal–Wallis one-way ANOVA test for effects of time and grouped phage treatments on alpha diversity measures (Count, Chao1, Shannon).
DOI: 10.6084/m9.figshare.27915537
title: Additional file 15 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 15. Table S8 Taxonomic relative abundance table for control and grouped phage treatments at 0, 24, and 72 h at the family and genus level.
DOI: 10.6084/m9.figshare.27915537.v1
title: Additional file 15 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 15. Table S8 Taxonomic relative abundance table for control and grouped phage treatments at 0, 24, and 72 h at the family and genus level.
DOI: 10.6084/m9.figshare.27915540
title: Additional file 16 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 16. Table S9 Results of a PERMANOVA on beta diversity (Jensen–Shannon dissimilarity) for control and individual phage treatments at 0, 24, and 72 h.
DOI: 10.6084/m9.figshare.27915540.v1
title: Additional file 16 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 16. Table S9 Results of a PERMANOVA on beta diversity (Jensen–Shannon dissimilarity) for control and individual phage treatments at 0, 24, and 72 h.
DOI: 10.6084/m9.figshare.27915543
title: Additional file 17 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 17. Table S10 Results of a PERMANOVA on beta diversity measures (Bray–Curtis, Jensen–Shannon, Jaccard, weighted and unweighted Unifrac distances) for control and grouped phage treatments at 0, 24, and 72 h.
DOI: 10.6084/m9.figshare.27915543.v1
title: Additional file 17 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 17. Table S10 Results of a PERMANOVA on beta diversity measures (Bray–Curtis, Jensen–Shannon, Jaccard, weighted and unweighted Unifrac distances) for control and grouped phage treatments at 0, 24, and 72 h.
DOI: 10.6084/m9.figshare.27915546
title: Additional file 18 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 18. Table S11 Results of a LDA effect size analysis on taxa at the genus and ASV level for control and grouped phage treatments at 0, 24, and 72 h.
DOI: 10.6084/m9.figshare.27915546.v1
title: Additional file 18 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 18. Table S11 Results of a LDA effect size analysis on taxa at the genus and ASV level for control and grouped phage treatments at 0, 24, and 72 h.
DOI: 10.6084/m9.figshare.27915549
title: Additional file 19 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 19. Table S12 Results of a single factor analysis with a Kruskal–Wallis test for control and grouped phage treatments at 72 h of relative abundances at the genus level.
DOI: 10.6084/m9.figshare.27915549.v1
title: Additional file 19 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 19. Table S12 Results of a single factor analysis with a Kruskal–Wallis test for control and grouped phage treatments at 72 h of relative abundances at the genus level.
DOI: 10.6084/m9.figshare.27915552
title: Additional file 20 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 20. Table S13 Results of a multiple linear regression analysis with MaAsLin2 for control and grouped phage treatments on taxa grouped at the genus level.
DOI: 10.6084/m9.figshare.27915552.v1
title: Additional file 20 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 20. Table S13 Results of a multiple linear regression analysis with MaAsLin2 for control and grouped phage treatments on taxa grouped at the genus level.
DOI: 10.6084/m9.figshare.27915555
title: Additional file 21 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 21. Table S14 BLAST analysis table for the identification of individual ASVs within the genus Vibrio (ordered in descending abundance) with their hits in the NCBI 16S rRNA database.
DOI: 10.6084/m9.figshare.27915555.v1
title: Additional file 21 of Phage-induced disturbance of a marine sponge microbiome

description: Additional file 21. Table S14 BLAST analysis table for the identification of individual ASVs within the genus Vibrio (ordered in descending abundance) with their hits in the NCBI 16S rRNA database.
DOI: 10.6084/m9.figshare.27915559
title: Additional file 2 of Nanopore direct RNA sequencing reveals N6-methyladenosine and polyadenylation landscapes on long non-coding RNAs in Arabidopsis thaliana

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.27915559.v1
title: Additional file 2 of Nanopore direct RNA sequencing reveals N6-methyladenosine and polyadenylation landscapes on long non-coding RNAs in Arabidopsis thaliana

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.27915562
title: Additional file 3 of Nanopore direct RNA sequencing reveals N6-methyladenosine and polyadenylation landscapes on long non-coding RNAs in Arabidopsis thaliana

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.27915562.v1
title: Additional file 3 of Nanopore direct RNA sequencing reveals N6-methyladenosine and polyadenylation landscapes on long non-coding RNAs in Arabidopsis thaliana

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.27915568
title: Additional file 4 of Nanopore direct RNA sequencing reveals N6-methyladenosine and polyadenylation landscapes on long non-coding RNAs in Arabidopsis thaliana

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.27915568.v1
title: Additional file 4 of Nanopore direct RNA sequencing reveals N6-methyladenosine and polyadenylation landscapes on long non-coding RNAs in Arabidopsis thaliana

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.27915571
title: Additional file 5 of Nanopore direct RNA sequencing reveals N6-methyladenosine and polyadenylation landscapes on long non-coding RNAs in Arabidopsis thaliana

description: Supplementary Material 5
DOI: 10.6084/m9.figshare.27915571.v1
title: Additional file 5 of Nanopore direct RNA sequencing reveals N6-methyladenosine and polyadenylation landscapes on long non-coding RNAs in Arabidopsis thaliana

description: Supplementary Material 5
DOI: 10.6084/m9.figshare.27915574
title: Additional file 6 of Nanopore direct RNA sequencing reveals N6-methyladenosine and polyadenylation landscapes on long non-coding RNAs in Arabidopsis thaliana

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.27915574.v1
title: Additional file 6 of Nanopore direct RNA sequencing reveals N6-methyladenosine and polyadenylation landscapes on long non-coding RNAs in Arabidopsis thaliana

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.27915586
title: Additional file 3 of The use of patient-reported outcome measures to improve patient-related outcomes – a systematic review

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.27915586.v1
title: Additional file 3 of The use of patient-reported outcome measures to improve patient-related outcomes – a systematic review

description: Supplementary Material 3.
DOI: 10.15468/dl.bfn6jb
title: Occurrence Download

description: A dataset containing 6497581 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Thailand"
 ]
}

 The dataset includes 6497581 records from 1572 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001247-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1594/pangaea.59637
title: Age control of sediment core BOFS14K

description: LGM time slice per analogy with BOFS5 and BOFS8
DOI: 10.1594/pangaea.59639
title: Age control of sediment core BOFS17K
DOI: 10.1594/pangaea.59642
title: Age control of sediment core BOFS8K

description: LGM time slice based on N. pachyderma d18O record, LGM base per analogy with BOFS 5
DOI: 10.1594/pangaea.59659
title: Age control of sediment core GIK15627-3

description: Corg data from Müller et al. (1983); Dry bulk densities (U. Pflaumann, unpubl.); Stratigraphy is supported by planktonic d18O records (Zahn-Knoll, 1986; Winn et al. 1991)
DOI: 10.1594/pangaea.59661
title: Age control of sediment core GIK15669-1
DOI: 10.1594/pangaea.59649
title: Age control points of sediment core GIK12345-5

description: Corg, CO2/Alk, Ntotal data from Hartmann et al. (1976); Dry bulk density from Müller & Suess (1979)
DOI: 10.1594/pangaea.59662
title: Age control of sediment core GIK16017-2

description: Dry bulk density data (U. Pflaumann, unpublished)Age dated after Zahn et al. (1987) dataset: doi:10.1594/PANGAEA.725950
DOI: 10.1594/pangaea.59650
title: Age control of sediment core GIK12347-2

description: Corg, CO2/Alk, Ntotal data (Hartmann et al. 1976); Add. org carbon measurements (K.Winn unpubl.); Paleotemp. peak at end of Termination I at 91.25 cm on the comp.depth (-2) is dated at 6.98 ka; 30-150 cm on comp.depth scale: uniform sediments justify uniform sed.rates; 14C ages at 100 cm and 120 cm on the comp.depth scale: contradictory and therefore ignored
DOI: 10.1594/pangaea.59651
title: Age control of sediment core GIK12379-1

description: Corg, CO2/Alk, Ntotal data (Hartmann et al. 1976) , supplemented with CO2-data from Koopmann (1979); Add. organic carbon measurements (K. Winn, unpubl.); 14C ages on organic carbon/CaCO3 were probably biased due to contamination
DOI: 10.1594/pangaea.58421
title: Susceptibility raw data of sediment core GIK17920-1
DOI: 10.1594/pangaea.58422
title: Susceptibility raw data of sediment core GIK17921-1
DOI: 10.1594/pangaea.58423
title: Susceptibility raw data of sediment core GIK17922-1
DOI: 10.1594/pangaea.58424
title: Susceptibility raw data of sediment core GIK17922-2
DOI: 10.1594/pangaea.58425
title: Susceptibility raw data of sediment core GIK17924-1
DOI: 10.1594/pangaea.58426
title: Susceptibility raw data of sediment core GIK17924-2
DOI: 10.1594/pangaea.59870
title: Age control of sediment core PS2876-2
DOI: 10.1594/pangaea.59871
title: Age control of sediment core PS2887-2
DOI: 10.1594/pangaea.59868
title: Age control of sediment core GIK13612-2

description: Corg data (K. Winn, unpublished); Exceptional maximum of Corg at 40.5 cm depth (2.3%)
DOI: 10.1594/pangaea.59872
title: Age control of sediment core V23-81

description: Age from trigger weight core at 0.015 m; 0.62 m and 1.89 m: 2-cm sediment samples, otherwise 1-cm samples; Cal. yrs conv from 14C yrs using INTCAL 98
DOI: 10.1594/pangaea.59753
title: Age control of sediment core V28-127
DOI: 10.1594/pangaea.59754
title: Age control of sediment core V28-14

description: Calendar years converted from 14C years using INTCAL 98
DOI: 10.1594/pangaea.59755
title: Age control of sediment core V28-56
DOI: 10.1594/pangaea.59757
title: Age control of sediment core V30-40

description: Calendar years converted from 14C years using INTCAL 98
DOI: 10.1594/pangaea.59758
title: Age control of sediment core V30-49

description: 12.4/10.4 isnt identified at ~35 cm depth (too low for d18O values!); Holocene d18O level is outstandingly low; 17.1/13.6 isnt picked directly (based on d13C evidence); Strange d13C signal at 26/29.5 ka; Cal. yrs converted from 14C yrs using INTCAL98
DOI: 10.1594/pangaea.59759
title: Age control of sediment core BOFS5K

description: more AMS 14C dates in Maslin (1992)
DOI: 10.1594/pangaea.55947
title: Carbon analysis of sediment core GIK15612-2
DOI: 10.1594/pangaea.55948
title: Thorium 230 of sediment core GIK15612-2
DOI: 10.1594/pangaea.267689
title: Sea surface temperatures reconstructed from sediment core GIK16772-2

description: composite depth: core fit between GIK16772-1 and GIK16772-2, original depth belongs to GIK16772-1 or GIK16772-2
DOI: 10.1594/pangaea.54422
title: Sedimentation rate and density of core GIK17049-6
DOI: 10.1594/pangaea.52498
title: (Table 2) Age model of DSDP Hole 22-215

description: Data are from I. Raffi (personal communication, 1991)
DOI: 10.1594/pangaea.55576
title: Planktic foraminifera distribution of sediment core GIK17940-2
DOI: 10.1594/pangaea.134730
title: Sedimentology on core RC11-83
DOI: 10.1594/pangaea.134289
title: Age model of sediment core GIK16030-1
DOI: 10.1594/pangaea.134632
title: Sedimentology on core GIK13521-1
DOI: 10.1594/pangaea.134563
title: Age model of sediment core BT4
DOI: 10.1594/pangaea.266965
title: Sea surface temperatures reconstructed from sediment core RC11-86
DOI: 10.1594/pangaea.267691
title: Sea surface temperatures reconstructed from sediment core GIK17049-6
DOI: 10.1594/pangaea.265184
title: Sea surface temperatures reconstructed from sediment core POS175/2_1171
DOI: 10.1594/pangaea.267692
title: Sea surface temperatures reconstructed from sediment core GIK17045-3

description: composite depth: core fit between GIK17045-2 and GIK17045-3
DOI: 10.15468/dl.vf5jp4
title: Occurrence Download

description: A dataset containing 622243 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acer platanoides L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 622243 records from 1769 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001655-250221090833381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccyc4l0
title: CCDC 874652: Experimental Crystal Structure Determination

description: Related Article: M.N.Kopylovich, M.F.C.G.da Silva, L.M.D.R.S.Martins, M.L.Kouznetsov, K.T.Mahmudov, A.J.L.Pombeiro|2013|Polyhedron|50|374|doi:10.1016/j.poly.2012.11.030
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccyc4m1
title: CCDC 874653: Experimental Crystal Structure Determination

description: Related Article: M.N.Kopylovich, M.F.C.G.da Silva, L.M.D.R.S.Martins, M.L.Kouznetsov, K.T.Mahmudov, A.J.L.Pombeiro|2013|Polyhedron|50|374|doi:10.1016/j.poly.2012.11.030
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccyc4n2
title: CCDC 874654: Experimental Crystal Structure Determination

description: Related Article: M.N.Kopylovich, M.F.C.G.da Silva, L.M.D.R.S.Martins, M.L.Kouznetsov, K.T.Mahmudov, A.J.L.Pombeiro|2013|Polyhedron|50|374|doi:10.1016/j.poly.2012.11.030
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.