cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3561177
title: Appendix B. Supplementary results: microbial composition affects a model ecosystem’s functional response to environmental change.

description: Supplementary results: microbial composition affects a model ecosystem’s functional response to environmental change.
DOI: 10.6084/m9.figshare.3561177.v1
title: Appendix B. Supplementary results: microbial composition affects a model ecosystem’s functional response to environmental change.

description: Supplementary results: microbial composition affects a model ecosystem’s functional response to environmental change.
DOI: 10.6084/m9.figshare.3561174
title: Appendix A. Detailed information about the trait database and the phylogeny.

description: Detailed information about the trait database and the phylogeny.
DOI: 10.6084/m9.figshare.3561171
title: Appendix B. Results using Leinster and Cobbold's index and comparisons with Chao's diversity index.

description: Results using Leinster and Cobbold's index and comparisons with Chao's diversity index.
DOI: 10.6084/m9.figshare.3561171.v1
title: Appendix B. Results using Leinster and Cobbold's index and comparisons with Chao's diversity index.

description: Results using Leinster and Cobbold's index and comparisons with Chao's diversity index.
DOI: 10.6084/m9.figshare.3561168
title: Supplement 1. R scripts for performing the α, β, γ decomposition.

description: File List abgFunctions.R (MD5: cb64e90444f8ecfa9bd42d7e63325440) Functions necessary to perform the α, β, γ-diversity decomposition example.R (MD5: 8e4fa85f9edfa1005b42200e2d6a14f1) Example of analysis with the phylocom dataset (R-package <i>picante</i>) Description The R-scripts are designed to assist the reader to use the methods of the article. The example shows how to use them to calculate the α, β, γ-diversity of a meta-community either through Chao's diversity index or Leinster & Cobbold. We also provide the functions to calculate inter-community pairwise distance matrices.
DOI: 10.6084/m9.figshare.3561168.v1
title: Supplement 1. R scripts for performing the α, β, γ decomposition.

description: File List abgFunctions.R (MD5: cb64e90444f8ecfa9bd42d7e63325440) Functions necessary to perform the α, β, γ-diversity decomposition example.R (MD5: 8e4fa85f9edfa1005b42200e2d6a14f1) Example of analysis with the phylocom dataset (R-package <i>picante</i>) Description The R-scripts are designed to assist the reader to use the methods of the article. The example shows how to use them to calculate the α, β, γ-diversity of a meta-community either through Chao's diversity index or Leinster & Cobbold. We also provide the functions to calculate inter-community pairwise distance matrices.
DOI: 10.6084/m9.figshare.3561165
title: Appendix A. Supplemental methods and 454 data processing.

description: Supplemental methods and 454 data processing.
DOI: 10.6084/m9.figshare.3561165.v1
title: Appendix A. Supplemental methods and 454 data processing.

description: Supplemental methods and 454 data processing.
DOI: 10.6084/m9.figshare.3561162
title: Appendix B. Relative abundance of sequences classified to bacterial phyla in CCESR soil.

description: Relative abundance of sequences classified to bacterial phyla in CCESR soil.
DOI: 10.6084/m9.figshare.3561162.v1
title: Appendix B. Relative abundance of sequences classified to bacterial phyla in CCESR soil.

description: Relative abundance of sequences classified to bacterial phyla in CCESR soil.
DOI: 10.6084/m9.figshare.3561159
title: Appendix C. Abundances and classifications of the largest OTUs.

description: Abundances and classifications of the largest OTUs.
DOI: 10.6084/m9.figshare.3561159.v1
title: Appendix C. Abundances and classifications of the largest OTUs.

description: Abundances and classifications of the largest OTUs.
DOI: 10.6084/m9.figshare.3561156
title: Appendix D. Nonmetric multidimensional scaling of bacterial communities.

description: Nonmetric multidimensional scaling of bacterial communities.
DOI: 10.6084/m9.figshare.3561156.v1
title: Appendix D. Nonmetric multidimensional scaling of bacterial communities.

description: Nonmetric multidimensional scaling of bacterial communities.
DOI: 10.6084/m9.figshare.3561153
title: Appendix E. Significant correlations of soil factors with NMDS axes.

description: Significant correlations of soil factors with NMDS axes.
DOI: 10.6084/m9.figshare.3561153.v1
title: Appendix E. Significant correlations of soil factors with NMDS axes.

description: Significant correlations of soil factors with NMDS axes.
DOI: 10.6084/m9.figshare.3561150
title: Appendix F. Correlations among plant richness, plant biomass, and soil edaphic characteristics.

description: Correlations among plant richness, plant biomass, and soil edaphic characteristics.
DOI: 10.6084/m9.figshare.3561150.v1
title: Appendix F. Correlations among plant richness, plant biomass, and soil edaphic characteristics.

description: Correlations among plant richness, plant biomass, and soil edaphic characteristics.
DOI: 10.6084/m9.figshare.3561147
title: Appendix G. Bacterial diversity correlates among plant richness treatments.

description: Bacterial diversity correlates among plant richness treatments.
DOI: 10.6084/m9.figshare.3561144
title: Appendix H. Correlation network among bacterial OTUs across samples.

description: Correlation network among bacterial OTUs across samples.
DOI: 10.6084/m9.figshare.3561147.v1
title: Appendix G. Bacterial diversity correlates among plant richness treatments.

description: Bacterial diversity correlates among plant richness treatments.
DOI: 10.6084/m9.figshare.3561144.v1
title: Appendix H. Correlation network among bacterial OTUs across samples.

description: Correlation network among bacterial OTUs across samples.
DOI: 10.6084/m9.figshare.3561141
title: Appendix A. Three figures showing relationships between sapwood decay, wood moisture content, and stump diameter; percentage of most abundant operational taxonomic units (OTUs) in freshly cut trees; and relationship between sapwood decay and OTU richness in old stumps.

description: Three figures showing relationships between sapwood decay, wood moisture content, and stump diameter; percentage of most abundant operational taxonomic units (OTUs) in freshly cut trees; and relationship between sapwood decay and OTU richness in old stumps.
DOI: 10.6084/m9.figshare.3561141.v1
title: Appendix A. Three figures showing relationships between sapwood decay, wood moisture content, and stump diameter; percentage of most abundant operational taxonomic units (OTUs) in freshly cut trees; and relationship between sapwood decay and OTU richness in old stumps.

description: Three figures showing relationships between sapwood decay, wood moisture content, and stump diameter; percentage of most abundant operational taxonomic units (OTUs) in freshly cut trees; and relationship between sapwood decay and OTU richness in old stumps.
DOI: 10.6084/m9.figshare.3561138
title: Appendix B. Most abundant OTUs (representing ≥10% of the total number of sequences) in decaying oak sapwood.

description: Most abundant OTUs (representing ≥10% of the total number of sequences) in decaying oak sapwood.
DOI: 10.6084/m9.figshare.3561138.v1
title: Appendix B. Most abundant OTUs (representing ≥10% of the total number of sequences) in decaying oak sapwood.

description: Most abundant OTUs (representing ≥10% of the total number of sequences) in decaying oak sapwood.
DOI: 10.6084/m9.figshare.3561135
title: Appendix C. Percentage of most abundant operational taxonomic units (OTUs) in samples collected from freshly cut oak stumps.

description: Percentage of most abundant operational taxonomic units (OTUs) in samples collected from freshly cut oak stumps.
DOI: 10.6084/m9.figshare.3561135.v1
title: Appendix C. Percentage of most abundant operational taxonomic units (OTUs) in samples collected from freshly cut oak stumps.

description: Percentage of most abundant operational taxonomic units (OTUs) in samples collected from freshly cut oak stumps.
DOI: 10.6084/m9.figshare.3561132
title: Appendix D. Percentage of most abundant operational taxonomic units (OTUs) in samples collected from young oak stumps.

description: Percentage of most abundant operational taxonomic units (OTUs) in samples collected from young oak stumps.
DOI: 10.6084/m9.figshare.3561129
title: Appendix E. Percentage of most abundant operational taxonomic units (OTUs) in samples collected from old oak stumps.

description: Percentage of most abundant operational taxonomic units (OTUs) in samples collected from old oak stumps.
DOI: 10.6084/m9.figshare.3561132.v1
title: Appendix D. Percentage of most abundant operational taxonomic units (OTUs) in samples collected from young oak stumps.

description: Percentage of most abundant operational taxonomic units (OTUs) in samples collected from young oak stumps.
DOI: 10.6084/m9.figshare.3561129.v1
title: Appendix E. Percentage of most abundant operational taxonomic units (OTUs) in samples collected from old oak stumps.

description: Percentage of most abundant operational taxonomic units (OTUs) in samples collected from old oak stumps.
DOI: 10.6084/m9.figshare.3561126
title: Appendix F. Co-occurrence analysis of sapwood-inhabiting fungal community data using C-score and checkerboard index analysis.

description: Co-occurrence analysis of sapwood-inhabiting fungal community data using C-score and checkerboard index analysis.
DOI: 10.6084/m9.figshare.3561126.v1
title: Appendix F. Co-occurrence analysis of sapwood-inhabiting fungal community data using C-score and checkerboard index analysis.

description: Co-occurrence analysis of sapwood-inhabiting fungal community data using C-score and checkerboard index analysis.
DOI: 10.6084/m9.figshare.3561123
title: Appendix G. Number of sequence reads per phylum, ratio between Basidiomycota and Ascomycota, H diversity, E eveness, the percentage Ascomycota and the percentage mass loss per sample.

description: Number of sequence reads per phylum, ratio between Basidiomycota and Ascomycota, H diversity, E eveness, the percentage Ascomycota and the percentage mass loss per sample.
DOI: 10.6084/m9.figshare.3561123.v1
title: Appendix G. Number of sequence reads per phylum, ratio between Basidiomycota and Ascomycota, H diversity, E eveness, the percentage Ascomycota and the percentage mass loss per sample.

description: Number of sequence reads per phylum, ratio between Basidiomycota and Ascomycota, H diversity, E eveness, the percentage Ascomycota and the percentage mass loss per sample.
DOI: 10.6084/m9.figshare.3561120
title: Supplement 1. Representative internal transcibed spacer (ITS) sequences of operational taxonomic units (OTUs) obtained from decaying oak stumps.

description: File List Supplement1.csv (MD5: 9ca195cf10eee035cedd3d2ea4df379b) Description Supplement1.csv - Representative ITS sequences of operational taxonomic units (OTUs) obtained from decaying oak stumps.
DOI: 10.6084/m9.figshare.3561120.v1
title: Supplement 1. Representative internal transcibed spacer (ITS) sequences of operational taxonomic units (OTUs) obtained from decaying oak stumps.

description: File List Supplement1.csv (MD5: 9ca195cf10eee035cedd3d2ea4df379b) Description Supplement1.csv - Representative ITS sequences of operational taxonomic units (OTUs) obtained from decaying oak stumps.
DOI: 10.6084/m9.figshare.3561117
title: Appendix A. Effects of warming and plant functional groups on litter mass loss.

description: Effects of warming and plant functional groups on litter mass loss.
DOI: 10.6084/m9.figshare.3561117.v1
title: Appendix A. Effects of warming and plant functional groups on litter mass loss.

description: Effects of warming and plant functional groups on litter mass loss.
DOI: 10.6084/m9.figshare.3561114
title: Appendix B. Effects of vegetation diversity (number of plant functional groups).

description: Effects of vegetation diversity (number of plant functional groups).
DOI: 10.6084/m9.figshare.3561114.v1
title: Appendix B. Effects of vegetation diversity (number of plant functional groups).

description: Effects of vegetation diversity (number of plant functional groups).
DOI: 10.6084/m9.figshare.3561111
title: Appendix C. Effects of warming and plant functional groups on soil fauna and microbes.

description: Effects of warming and plant functional groups on soil fauna and microbes.
DOI: 10.6084/m9.figshare.3561111.v1
title: Appendix C. Effects of warming and plant functional groups on soil fauna and microbes.

description: Effects of warming and plant functional groups on soil fauna and microbes.
DOI: 10.6084/m9.figshare.3561108
title: Appendix A. Linear Model table of F and P values on the effects of plant diversity (PD: 1, 4 and 16 plant species) on mass enzyme activity of 1,4 -β-glucosidase, cellobiohydrolase, 1,4-β-N-acetyl-glucosaminidase, phosphatase, peroxidase, phenol oxidase, and urease of 2011 and 2012.

description: Linear Model table of F and P values on the effects of plant diversity (PD: 1, 4 and 16 plant species) on mass enzyme activity of 1,4 -β-glucosidase, cellobiohydrolase, 1,4-β-N-acetyl-glucosaminidase, phosphatase, peroxidase, phenol oxidase, and urease of 2011 and 2012.
DOI: 10.6084/m9.figshare.3561108.v1
title: Appendix A. Linear Model table of F and P values on the effects of plant diversity (PD: 1, 4 and 16 plant species) on mass enzyme activity of 1,4 -β-glucosidase, cellobiohydrolase, 1,4-β-N-acetyl-glucosaminidase, phosphatase, peroxidase, phenol oxidase, and urease of 2011 and 2012.

description: Linear Model table of F and P values on the effects of plant diversity (PD: 1, 4 and 16 plant species) on mass enzyme activity of 1,4 -β-glucosidase, cellobiohydrolase, 1,4-β-N-acetyl-glucosaminidase, phosphatase, peroxidase, phenol oxidase, and urease of 2011 and 2012.
DOI: 10.6084/m9.figshare.3561105
title: Supplement 1. Complete data set of all measured variables of 2011 and 2012.

description: File List data.txt (MD5: 425b0832b1d6aa48ae879c9b3044ba68) Description The data.txt file is a tab-separated file. It contains the raw data on soil microbial biomass and functions. Column definitions Plotcode Year (2011/2012) Plant species richness (1, 4, 16) Temperature (ambient, + 1.5°C, + 3°C) Plant functional groups: Legumes (0,1) Plant functional groups: Forbs (0,1) Plant functional groups: Woddy species (0,1) Plant functional groups: C3-grasses (0,1) Plant functional groups: C4-grasses (0,1) Water content % Microbial biomass Cmic Microbial Growth after addition of C Microbial Growth after addition of CN Microbial Growth after addition of CP Microbial Growth after addition of CNP Enzyme activity: ß-1,4-glucosidase Enzyme activity: Cellobiohydrolase Enzyme activity: ß-1,4-N-acetylglucosaminidase Enzyme activity: Acid phosphatase Enzyme activity: Phenol oxidase Enzyme activity: Peroxidase Enzyme activity: Urease Mass specific enzyme activity: ß-1,4-glucosidase Mass specific enzyme activity: Cellobiohydrolase Mass specific enzyme activity: ß-1,4-N-acetylglucosaminidase Mass specific enzyme activity: Acid phosphatase Mass specific enzyme activity: Phenol oxidase Mass specific enzyme activity: Peroxidase Mass specific enzyme activity: Urease
DOI: 10.6084/m9.figshare.3561102
title: Appendix A. List of experimental species used in the Coyote Ridge biodiversity experiment.

description: List of experimental species used in the Coyote Ridge biodiversity experiment.
DOI: 10.6084/m9.figshare.3561102.v1
title: Appendix A. List of experimental species used in the Coyote Ridge biodiversity experiment.

description: List of experimental species used in the Coyote Ridge biodiversity experiment.
DOI: 10.6084/m9.figshare.3561099
title: Appendix A. Figures of pupal predation, mesocosm, physical defense addition, and physical defense removal experiments.

description: Figures of pupal predation, mesocosm, physical defense addition, and physical defense removal experiments.
DOI: 10.6084/m9.figshare.3561099.v1
title: Appendix A. Figures of pupal predation, mesocosm, physical defense addition, and physical defense removal experiments.

description: Figures of pupal predation, mesocosm, physical defense addition, and physical defense removal experiments.
DOI: 10.6084/m9.figshare.3561096
title: Appendix A. Contrasting between- and within-individual trait effects on mortality risk in a long-lived seabird.

description: Contrasting between- and within-individual trait effects on mortality risk in a long-lived seabird.
DOI: 10.6084/m9.figshare.3561096.v1
title: Appendix A. Contrasting between- and within-individual trait effects on mortality risk in a long-lived seabird.

description: Contrasting between- and within-individual trait effects on mortality risk in a long-lived seabird.
DOI: 10.6084/m9.figshare.3561093
title: Appendix A. Number of seasons (divided by pack) for which we had sufficient sample size to estimate Utilization Distributions.

description: Number of seasons (divided by pack) for which we had sufficient sample size to estimate Utilization Distributions.
DOI: 10.6084/m9.figshare.3561093.v1
title: Appendix A. Number of seasons (divided by pack) for which we had sufficient sample size to estimate Utilization Distributions.

description: Number of seasons (divided by pack) for which we had sufficient sample size to estimate Utilization Distributions.
DOI: 10.6084/m9.figshare.3561090
title: Appendix B. Standardized regression coefficients for two models, each aiming to predict the volume of intersection in summer.

description: Standardized regression coefficients for two models, each aiming to predict the volume of intersection in summer.
DOI: 10.6084/m9.figshare.3561090.v1
title: Appendix B. Standardized regression coefficients for two models, each aiming to predict the volume of intersection in summer.

description: Standardized regression coefficients for two models, each aiming to predict the volume of intersection in summer.
DOI: 10.6084/m9.figshare.3561087
title: Appendix C. Mean pack size tends to increase with total population density for the Northern Range wolf population (1996–2011).

description: Mean pack size tends to increase with total population density for the Northern Range wolf population (1996–2011).
DOI: 10.6084/m9.figshare.3561087.v1
title: Appendix C. Mean pack size tends to increase with total population density for the Northern Range wolf population (1996–2011).

description: Mean pack size tends to increase with total population density for the Northern Range wolf population (1996–2011).
DOI: 10.6084/m9.figshare.3561084
title: Appendix A. Model selection tables ranking the best models to explain the foraging behavior of gerbils.

description: Model selection tables ranking the best models to explain the foraging behavior of gerbils.
DOI: 10.6084/m9.figshare.3561084.v1
title: Appendix A. Model selection tables ranking the best models to explain the foraging behavior of gerbils.

description: Model selection tables ranking the best models to explain the foraging behavior of gerbils.
DOI: 10.6084/m9.figshare.3561081
title: Appendix A. Measurements of reproductive traits in Alpine marmot (Marmota marmota).

description: Measurements of reproductive traits in Alpine marmot (Marmota marmota).
DOI: 10.6084/m9.figshare.3561078
title: Appendix B. Age variation in reproductive probability.

description: Age variation in reproductive probability.
DOI: 10.6084/m9.figshare.3561075
title: Appendix C. Detailed statistical analyses.

description: Detailed statistical analyses.
DOI: 10.6084/m9.figshare.3561078.v1
title: Appendix B. Age variation in reproductive probability.

description: Age variation in reproductive probability.
DOI: 10.6084/m9.figshare.3561075.v1
title: Appendix C. Detailed statistical analyses.

description: Detailed statistical analyses.
DOI: 10.6084/m9.figshare.3561072
title: Appendix A. Supplementary information on study tree species.

description: Supplementary information on study tree species.
DOI: 10.6084/m9.figshare.3561072.v1
title: Appendix A. Supplementary information on study tree species.

description: Supplementary information on study tree species.
DOI: 10.6084/m9.figshare.3561069
title: Appendix B. Methods for meteorological variables.

description: Methods for meteorological variables.
DOI: 10.6084/m9.figshare.3561069.v1
title: Appendix B. Methods for meteorological variables.

description: Methods for meteorological variables.
DOI: 10.6084/m9.figshare.3561066
title: Appendix C. Figure for micrometeorological data during the study period.

description: Figure for micrometeorological data during the study period.
DOI: 10.6084/m9.figshare.3561066.v1
title: Appendix C. Figure for micrometeorological data during the study period.

description: Figure for micrometeorological data during the study period.
DOI: 10.6084/m9.figshare.3561063
title: Appendix D. Figure for mean change in daily sap velocity during the dry period for each tree species after liana removal.

description: Figure for mean change in daily sap velocity during the dry period for each tree species after liana removal.
DOI: 10.6084/m9.figshare.3561063.v1
title: Appendix D. Figure for mean change in daily sap velocity during the dry period for each tree species after liana removal.

description: Figure for mean change in daily sap velocity during the dry period for each tree species after liana removal.
DOI: 10.6084/m9.figshare.3561060
title: Appendix E. Soil volumetric water content data and sap velocity data for each tree at control and removal plots for each study period.

description: Soil volumetric water content data and sap velocity data for each tree at control and removal plots for each study period.
DOI: 10.6084/m9.figshare.3561060.v1
title: Appendix E. Soil volumetric water content data and sap velocity data for each tree at control and removal plots for each study period.

description: Soil volumetric water content data and sap velocity data for each tree at control and removal plots for each study period.
DOI: 10.6084/m9.figshare.3561057
title: Appendix A. Extended description of methods, and full compilation of results from the statistical analysis.

description: Extended description of methods, and full compilation of results from the statistical analysis.
DOI: 10.6084/m9.figshare.3561057.v1
title: Appendix A. Extended description of methods, and full compilation of results from the statistical analysis.

description: Extended description of methods, and full compilation of results from the statistical analysis.
DOI: 10.6084/m9.figshare.3561054
title: Appendix A. Map of the southern block of Ranomafana National Park, Madagascar, showing the field sites.

description: Map of the southern block of Ranomafana National Park, Madagascar, showing the field sites.
DOI: 10.6084/m9.figshare.3561054.v1
title: Appendix A. Map of the southern block of Ranomafana National Park, Madagascar, showing the field sites.

description: Map of the southern block of Ranomafana National Park, Madagascar, showing the field sites.
DOI: 10.6084/m9.figshare.3561051
title: Appendix B. Distribution of the dispersal events sampled across species and sites.

description: Distribution of the dispersal events sampled across species and sites.
DOI: 10.6084/m9.figshare.3561051.v1
title: Appendix B. Distribution of the dispersal events sampled across species and sites.

description: Distribution of the dispersal events sampled across species and sites.
DOI: 10.6084/m9.figshare.3561048
title: Appendix C. Description of the four study sites where data on dispersal events were collected.

description: Description of the four study sites where data on dispersal events were collected.
DOI: 10.6084/m9.figshare.3561048.v1
title: Appendix C. Description of the four study sites where data on dispersal events were collected.

description: Description of the four study sites where data on dispersal events were collected.
DOI: 10.6084/m9.figshare.3561045
title: Appendix D. Estimation of dispersal parameters and demographic rates, and creation of probability recruitment models.

description: Estimation of dispersal parameters and demographic rates, and creation of probability recruitment models.