cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/7mpv5538zg
title: Figure S1: PRISMA flow diagram for EDS systematic review

description: PRISMA flow diagram for EDS systematic review
DOI: 10.6084/m9.figshare.27992534.v1
title: Raw data.xlsx

description: Raw data Psoriasis and Inflammasome
DOI: 10.6084/m9.figshare.7668218.v1
title: Dataset for Experiment 2 in the paper Ego depletion may explain gender differences in multitasking

description: Dataset for Experiment 2 in the paper Ego depletion may explain gender differences in multitasking
DOI: 10.17632/gcypkw7jc4
title: Single-Molecule m6A Detection Empowered by Endogenous Labeling Unveils Complexities Across RNA Isoforms

description: Original data of this paper
DOI: 10.6084/m9.figshare.28374881.v1
title: Supplementary Material for: Streptococcus mutans GcrR regulates oral biofilm from a cariogenic state to a non-cariogenic state by affecting exopolysaccharides production and biofilm homeostasis

description: Introduction: Dental caries is a non-communicable disease caused by dysbiosis of dental biofilm. S. mutans is considered the major pathogen. The orphan response regulator GcrR negatively regulates exopolysaccharides (EPSs) synthesis in S. mutans. We aimed to investigate the effect of GcrR on the cariogenicity of oral biofilms. A multispecies biofilm model was constructed, including S. mutans, S. sanguinis, and S. gordonii. Methods: The morphology of multispecies biofilms was detected through scanning electron microscopy (SEM), and the structure was observed using confocal laser scanning microscopy (CLSM). The microbial composition was measured by fluorescence in situ hybridization (FISH) and qPCR. The expression of genes was detected by quantitative RT-PCR (qRT-PCR). A specific pathogen-free (SPF) rat model was used to assess the cariogenicity of the multispecies biofilms. Results: The architecture of the biofilm was significantly impaired when gcrR-overexpressed S. mutans incubated with S. sanguinis, and S. gordonii (SmugcrR++S.s+S.g). The biofilm exhibited a decrease in the production of water-insoluble glucans (WIGs) and water-soluble glucans (WSGs), consistent with a decreased expression of EPS synthesis-related genes. The SmugcrR++S.s+S.g biofilm exhibited an increase in non-cariogenic species with lower lactic acid production. Furthermore, SmugcrR++S.s+S.g biofilm exhibited reduced cariogenicity. Conclusion: The biofilm cariogeneicity could be shifted to a less cariogenic state by increased expression of the GcrR regulator.
DOI: 10.6084/m9.figshare.26785480.v2
title: Supplementary Materials for "Weight-Specific Grip Strength as a Novel Indicator Associated with Cardiometabolic Risk in Children: The EMSNGS Study"

description: Handgrip strength (HGS) is a crucial indicator of sarcopenia and adverse health outcomes. However, evaluating HGS in children presents challenges, and its association with metabolism remains incompletely understood. This study aimed to establish grip strength reference values for Chinese children and adolescents and assess the role of HGS in relation to cardiometabolic risk. The research successfully established these reference values, introduced the concept of weight-specific HGS and RHGS, and revealed a dose-dependent relationship between weight-specific grip strength and cardiometabolic risk. These findings offer valuable insights into the link between low muscle strength and cardiometabolic risk.
DOI: 10.6084/m9.figshare.28787834.v3
title: ReBCO - 2mm - AC Losses + v(t), i(t)

description: Experimental tests were carried out to measure the AC losses of BSCCO tapes with 4mm wide. The used experimental setup comprises a sinusoidal voltage source (Keysight AC6804B) connected to a step-down transformer, with the secondary connected to the HTS tapes. Voltage taps are soldered to both sides of the HTS tape sample. A cancellation coil is employed to align the tape’s voltage and current, thereby reducing errors in computing the active power. The voltage signal undergoes an 80-fold amplification stage in the Low Noise Amplifier (LNA) before being visualized and acquired by an oscilloscope. For each current step, a 5-period signal is acquired 20 times, from which an average 5-period signal is derived. Each measurement step is repeated five times to mitigate noise. From these tests, AC voltage-current (V-I) characteristics and total AC losses are experimentally determined. In addition to the cancelation coil method, the voltage was also measured using a Lock-in amplifier, using the current as a phase reference.HTS 1<sup>st</sup> gen. BSCCO and 2<sup>nd</sup> gen. ReBCO Tapes’ CharacteristicsCharacteristic BSCCO (1<sup>st</sup> gen.)ReBCO (2<sup>nd</sup> gen.)ReBCO (2<sup>nd</sup> gen.)<i>I</i><sub><em>c</em></sub> (77K) @ dc 160-180A155-175A83-85A<i>n </i>(77K) @ dc 10-1330-3529-30<i>B</i><sub><em>0 </em></sub>(77K) @ dc 0.1 - 0.14 T0.1 - 0.14 T0.1 - 0.14 TGeometry EllipticalThin stripThin strip<i>w</i><sub><em>sc</em></sub> (<i>w</i><sub><em>sc</em></sub> = 2a) 3.5 mm4.01 mm2.04 mm<i>h</i><sub><em>sc</em></sub> (<i>h</i><sub><em>sc</em></sub> = 2b) 0.12 mm0.095 mm0.095 mm<i>l</i><sub><em>sc </em></sub>(length) 120 mm105 mm95 mmManufacturerNexans SuperConductorsBSCCO-2212 C01-207SuperPowerSCS4050-APSuperPowerSCS2050-AP<br><br>To use this data, please cite:https://iopscience.iop.org/article/10.1088/1361-6668/ad1f7c/meta<br>
DOI: 10.17632/b69pjpzbww
title: Antidiabetic Effect of Butterfly Pea (Clitoria ternatea) Flower

description: Plants are good sources of compounds which have been associated with health benefits, including antidiabetic properties. Research has shown that plant polyphenols such as anthocyanins possess amylase and/or glucosidase inhibition activities and they may be used as supplementary treatments for improving glycemic control in diabetic patients. In this unfunded project conducted at Abertay University from 2016 to 2020, the inhibitory effect of butterfly pea (Clitoria ternatea) - a tropical plant from the Leguminosae family with a blue flower - against starch digestive enzymes during simulated digestion was investigated. The basic composition of the flower extract was characterised and the efficacy of the inhibition of the extract against amylase and glucosidase was quantified through a series of in vitro starch digestion experiments. The interaction of the extract with enzyme amylase is monitored using a time-resolved fluorescence technique.
DOI: 10.6084/m9.figshare.22283863.v1
title: complete experimental data

description: .pzf files
DOI: 10.6084/m9.figshare.25428100.v1
title: <b>Applying global warming levels of emergence to highlight the increasing population exposure to temperature and precipitation extremes</b>.

description: Data and material for the publication "Applying global warming levels of emergence to highlight the increasing population exposure to temperature and precipitation extremes" by Gampe et al. (2024). The folders contain the respective data sets and code to reproduce the corresponding figures in the manuscript. For any additional data and/or code please refer to the corresponding author.<br>Gampe, D., Schwingshackl, C., Böhnisch, A., Mittermeier, M., Sandstad, M., & Wood, R. R. (2024). Applying global warming levels of emergence to highlight the increasing population exposure to temperature and precipitation extremes. Earth System Dynamics.
DOI: 10.6084/m9.figshare.25611492.v1
title: Supplementary Material for: Long-term Healthcare Resource Utilization and Costs among Patients with Myasthenia Gravis: A Swedish Nationwide Population-based Study

description: Introduction: Health care costs and societal impact of myasthenia gravis (MG), a potentially life-threatening rare, chronic neuromuscular disease are sparsely studied. We assessed healthcare resource utilization (HCRU) and associated costs among patients with newly diagnosed (ND) and pre-existing (PE) MG in Sweden.
Methods: This observational, retrospective cohort study used data from four linkable Swedish nationwide population-based registries. Adult MG patients receiving pharmacological treatment for MG and having ≥ 24-month follow-up during the period 1/1/2010 to 12/31/2017 were included. 
Results: A total of 1,275 patients were included in the analysis, of which 554 patients were categorized into the ND MG group and 721 into the PE MG group. Mean (±SD) age was 61.3 (±17.4) years and 52.3% were female. In first year post-diagnosis, ND patients had significantly higher utilization of acetylcholinesterase inhibitors (96.0% vs 83.9%), corticosteroids (59.6% vs 45.8%), thymectomy (12.1% vs 0.7%) and plasma exchange (3.8% vs 0.6%); had higher all-cause (70.9% vs 35.8%) and MG-related (62.5% vs 18.4%) hospitalization rates with 11 more hospitalization days (all p&lt;0.01) and an increased risk of hospitalization (odds ratio [95% CI] = 4.4 [3.43, 5.64]) than PE MG. In year 1 post-diagnosis, ND MG patients incurred €7302 (p&lt;0.01) higher total all-cause costs than PE MG, of which 84% were estimated to be MG-related and the majority (86%) were related to inpatient care. These results remained significant also after controlling for baseline demographics and comorbidities (p&lt;0.01). In year 2 post-diagnosis, the all-cause medical costs decreased by ~55% for ND MG from year 1 and were comparable with PE MG. 
Conclusion: In this population-based study, MG patients required significantly more healthcare resources in year 1 post-diagnosis than PE MG primarily due to more pharmacological treatments, thymectomies and associated hospitalizations. These findings highlight the need to better understand potential factors including disease characteristics associated with increased health resource use and costs and need for more efficacious treatments early in the disease course.
DOI: 10.6084/m9.figshare.8137934.v1
title: Genome Assembly

description: Genome Assembly Sequence
DOI: 10.6084/m9.figshare.25472167.v1
title: R10.4.1 KIT14 Dorado 0.5.3 assemblies

description: Whole genome bacterial assemblies of bacterial pathogens, assembled with either R10.4.1 ONT sequences or Hybrid Illumina-Nanopore assemblies (trycycler or unicyclcer).
DOI: 10.6084/m9.figshare.15176925.v2
title: μCT analyses

description: μCT data
DOI: 10.6084/m9.figshare.26045362.v1
title: Appendix: AI generated data

description: This appendix represents the AI-generated data from four platforms used for comparison in the main body of the paper.
DOI: 10.6084/m9.figshare.7527734.v1
title: Graph Input Data.xlsx

description: Using the User Manual as a guide and the Excel Graph Input Data Example file as a reference, the user enters the semantics of the graph model in this file.
DOI: 10.5522/04/12890792.v1
title: Replication Package for "Enhancing Genetic Improvement of Software with Regression Test Selection"

description: This is the replication package for the paper "Enhancing Genetic Improvement of Software with Regression Test Selection", accepted at ICSE 2021.<br>The data is 360MB compressed and around 1GB uncompressed.<br>The full package contains: tool used to run the experiments, subject programs, data analysis scripts, and resulting data from our experiments. Moreover, we provide .md files with guides on how to setup and run the experiments.<br>In order to run the experiments, you will need Java 8 installed. In order to analyse the experiments, you will need R installed. More details can be found in "REQUIREMENTS.md".<br>More information can be found in the "README.md" file included in this package.<br>
DOI: 10.6084/m9.figshare.25522900.v2
title: EN Dataset_Whole anonymized data.xlsx

description: Dataset of responses obtained to the online questionnaire on patients' and caregivers' satisfaction after neuro-orthopedic surgery and rehabilitation in the short and medium terms.
DOI: 10.4121/uuid:44c32783-15d0-4dbd-af8a-78b97be3de49
title: 'Conformance Checking in the Large' (BPM 2013)

description: Set for Conformance Checking (Model+Log) - Artificially Created - Model: Large Petri Nets (~320 transitions) - Log: (almost) all non fitting logs
DOI: 10.6084/m9.figshare.16615897.v1
title: Supplementary Material for: Mouse Models for Human Skin Transplantation: A Systematic Review

description: Immunodeficient mouse models with human skin xenografts have been developed in the past decades to study different conditions of the skin. Features such as follow-up period and size of the graft are of different relevance depending on the purpose of an investigation. The aim of this study is to analyze the different mouse models grafted with human skin. A systematic review of the literature was performed in line with the PRISMA statement using MEDLINE/PubMed databases from January 1970 to June 2020. Articles describing human skin grafted onto mice were included. Animal models other than mice, skin substitutes, bioengineered skin, postmortem or fetal skin, and duplicated studies were excluded<b>.</b> The mouse strain, origin of human skin, graft dimensions, follow-up of the skin graft, and goals of the study were analyzed. Ninety-one models were included in the final review. Five different applications were found: physiology of the skin (25 models, mean human skin graft size 1.43 cm<sup>2</sup> and follow-up 72.92 days), immunology and graft rejection (17 models, mean human skin graft size 1.34 cm<sup>2</sup> and follow-up 86 days), carcinogenesis (9 models, mean human skin graft size 1.98 cm<sup>2</sup> and follow-up 253 days), skin diseases (25 models, mean human skin graft size 1.55 cm<sup>2</sup> and follow-up 86.48 days), and would healing/scars (15 models, mean human skin graft size 2.54 cm<sup>2</sup> and follow-up 129 days). The follow-up period was longer in carcinogenesis models (253 ± 233.73 days), and the skin graft size was bigger in wound healing applications (2.54 ± 3.08 cm<sup>2</sup>). Depending on the research application, different models are suggested. Careful consideration regarding graft size, follow-up, immunosuppression, and costs should be analyzed and compared before choosing any of these mouse models. To our knowledge, this is the first systematic review of mouse models with human skin transplantation.
DOI: 10.6084/m9.figshare.14730522.v1
title: Datasets.xlsx

description: Datasets to be uploaded after publication
DOI: 10.6084/m9.figshare.21937481.v1
title: Suppl_table_1_Results CAF310122_Group B.xlsx

description: Table with measured echo parameters in group B.
DOI: 10.6084/m9.figshare.18316529.v1
title: BackgroundMatchingData.xlsx

description: Field survival data and image analysis data from my PhD thesis. Field survival data is derived from in-situ predation experiments on paper moth models that had been placed on different background treatments. Image analysis data includes results from colour, luminance, and pattern analyses derived from the MICA and QCPA toolboxes.
DOI: 10.6084/m9.figshare.20338641.v1
title: herbivory-temperate_rainforest.xlsx

description: Resistance and tolerance to herbivory in 11 evergreen species from the temperate rain forest of South America.
DOI: 10.6084/m9.figshare.24710217.v1
title: Ruminant archaeome

description: Ruminant gut archaeal genomes
DOI: 10.6084/m9.figshare.24132828.v1
title: Shotgun metagenomics of water and sediments from two artificial lakes in the Gauteng Province of South Africa

description: This dataset presents a collection of Metagenome-Assembled Genomes (MAGs) derived from shotgun metagenomic sequencing of water and sediment samples collected from two artificial lakes in the Gauteng Province of South Africa.Background:The study aimed to explore the microbial communities and their functional potentials within these man-made freshwater environments. Artificial lakes, often constructed for recreational, agricultural, or water storage purposes, can harbor unique microbial ecosystems influenced by anthropogenic activities and the surrounding environment.Dataset Contents:MAGs representing diverse taxonomic groups and potential functional roles.Potential Applications:Comparative analysis of microbial communities between natural and artificial aquatic environments.Insights into the functional potential of microbial communities in freshwater ecosystems.Baseline data for future monitoring and management of water quality in artificial lakes.Methods:Shotgun metagenomic sequencing was performed on extracted DNA from water and sediment samples. Sequencing data were processed, assembled, and binned to obtain the MAGs presented in this dataset.Citation:Please cite this dataset if used in publications or presentations. Details for citation will be available once the dataset is published.
DOI: 10.6084/m9.figshare.26963326.v1
title: <b>A comprehensive dataset for Nobel laureates</b>

description: Nobel laureates have made groundbreaking contributions to science and society. Analyzing their scientific careers and works using quantitative methods reveals key innovations and breakthroughs across human history. Yet, understanding Nobel laureates’ scientific phenomena has been challenging due to difficulty collecting data about them and their works. To remedy this challenge, this study built a comprehensive dataset of Nobel laureates spanning from 1901, when the prizes were first awarded, to 2023. This dataset consists of three parts including personal information, awards details, and publications records, which are organized in a relational format. Data on all 735 laureates in Chemistry, Economic Science, Physics, and Physiology or Medicine was collected from official and trustworthy sources including Nobdelprize.org, Wikipedia, OpenAlex, and Google Scholar. A widely adopted open-source database management system was used to host and release the dataset. By analyzing this dataset, the community and researchers are expected to gain a deeper understanding of Nobel laureates, their impacts on society, and better insights into further scientific breakthroughs.
DOI: 10.6084/m9.figshare.28139939.v1
title: Research data.xls

description: The dataset consists of grain size, some major elements and rare earth elements since 36.7 ka BP.
DOI: 10.17632/bpyxwkv9wj
title: Persian Classical Music Instrument Recognition (PCMIR) Database

description: If you used the database, please cite this paper: Mousavi, Seyed Muhammad Hossein, and VB Surya Prasath. "Persian Classical Music Instrument Recognition (PCMIR) Using a Novel Persian Music Database." 2019 9th International Conference on Computer and Knowledge Engineering (ICCKE). IEEE, 2019. or Mousavi, Seyed Muhammad Hossein, and VB Surya Prasath. "Persian Classical Music Instrument Recognition (PCMIR) Using a Novel Persian Music Database." 2019 9th International Conference on Computer and Knowledge Engineering (ICCKE). IEEE, 2019. Due to the lack of availability of Persian musical instruments-based databases, we decided to make one. Proposed database contains of 7 main Persian musical instruments: Ney, Tar, Santur, Kamancheh, Tonbak, Ud and Setar classes. Classes consist of 89 to 110 samples; each sample 5-10 seconds. Database is developed with the aid of musicians whom we asked to play and we recorded. Some of the pieces were played in natural places such as rooms and music shops and a few in the music studios.
DOI: 10.6084/m9.figshare.21802800.v3
title: Early Oligocene onset of the Qilian Shan uplift in the northeastern Tibetan Plateau: Evidence from magnetostratigraphy and provenance from the Jiuxi Basin

description: Paleomagnetism and detrital zircon data  for Baiyanghe section in the Jiuxi Basin
DOI: 10.6084/m9.figshare.26361922.v2
title: Figure 1A

description: Data from Figure 1A
DOI: 10.6084/m9.figshare.17058272.v2
title: wind_farm_effects_us

description: The development of wind energy is essential for decarbonizing energy supplies. However, the construction of wind farms changes land surface temperature (LST) and vegetation by modifying land surface properties and disturbing land-atmosphere interactions. In this study, we used MODIS satellite data to quantify the impacts of 319 wind farms on local climate and vegetation in the United States. Our results indicated insignificant impacts on LST during the daytime but significant warming of 0.10°C on annual mean nighttime LST averaged for all wind farms, and 0.36°C for those 61% wind farm samples with warming. The nighttime LST impacts exhibited seasonal variations, with stronger warming in winter and autumn up to 0.18°C but weaker effects in summer and spring. We observed a decrease in peak NDVI for 59% of wind farms due to infrastructure construction, with an average decrease of 0.0067 compared to non-wind-farm areas. The impacts of wind farms depended on wind farm size, with winter LST impacts for large and small wind farms ranging from 0.21°C to 0.14°C, and peak NDVI impacts ranging from -0.009 to -0.006. The LST impacts declined with the increasing distance from the wind farm, with detectable impacts up to 10 km. In contrast, the vegetation impacts on NVDI were only evident within the wind farm locations. Wind farms built in grassland and cropland showed larger warming effects but weaker vegetation impact compared to those built on forest land. Furthermore, spatial correlation analyses with environmental factors suggest limited geographical controls on the heterogeneous wind farm impacts and highlight the important role of local factors. Our analyses based on a large sample offer new observational evidence for the wind farm impacts with improved representativeness. This knowledge is important to fully understand the climatic and environmental implications of energy system decarbonization.
DOI: 10.6084/m9.figshare.12612992.v1
title: Extended Data

description: Extended Data<br>
DOI: 10.17632/gjffv4c3zw
title: Supplement A: Methods

description: Supplement A: Methods
DOI: 10.17632/zt27ykdrgr
title: dataset of a functional MRI study in transgender individuals - Part II

description: Processed images for the ICA analyses in the "Brain network interactions in transgender individuals with gender incongruence" manuscript submitted to Neuroimage journal.
Original T1- and T2*-weighted images can be found in: doi:10.17632/hjmfrv6vmg.1
DOI: 10.6084/m9.figshare.10490228.v1
title: RNA-seq Matrix

description: The emergence of eusociality is one of the major events in evolution. Although several previous studies have investigated the mechanism underlying caste differentiation and social behavior of eusocial insects including ants and honeybees, the molecular circuits governing the sociality of these insects remain obscure. In this study, we profiled the brain transcriptome of all categories of adult castes: queens, males, gynes and workers in Monomorium pharaonis which is a typical caste-dependent eusocial insect. A total of 16 samples from 4 biological replicates were processed and sequenced, resulting in 243.95 Gb high quality raw sequencing data. We also demonstrated strong reproducibility of the datasets and identified specific genes that may be associated with caste differentiation. Overall, our data will be a valuable resource for further study of the mechanisms underlying eusocial insects behaviour, particularly the role of brain in the control of eusociality.
DOI: 10.6084/m9.figshare.13064054.v1
title: Metadata record for: Electronic healthcare records and external outcome data for hospitalized patients with heart failure

description: This dataset contains key characteristics about the data described in the Data Descriptor Electronic healthcare records and external outcome data for hospitalized patients with heart failure. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format <br> <br> <br>
DOI: 10.17632/fjvjfp7k7w
title: Upadacitinib and its role in the treatment of vitiligo: a new possible therapeutic perspective

description: Supplemental Table 1. Clinico-epidemiological characteristics of patients with vitiligo who received upadacitinib.
DOI: 10.6084/m9.figshare.21632630.v1
title: Figshare.xlsx

description: The data is produced in Japanese.