cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15483/2586485
title: 2022 Next-Generation National Household Travel Survey - Origin-Destination Data Addendum for the Oahu Region

description: # 2022 Next-Generation National Household Travel Survey – Origin-Destination Data Addendum for the Oahu Region
The 2022 Next-Generation National Household Travel Survey – Origin-Destination Data Addendum for the Oahu Region covers the Hawaiian island of Oahu and five counties in surrounding islands.

An addendum to the nationwide version of the study conducted in 2019, this regional survey provided additional information and spatial granularity about people’s movements to, from, and within the areas under study.

## Data Collection Agency
The survey was conducted for the Oahu Metropolitan Planning Organization.

## Survey Methodology
Data were collected in two zones: the core area (census blocks in the island of Oahu) and the halo area (five counties in adjacent Hawaiian islands).

All trips were assigned an origin zone and a destination zone, as well as a travel mode, purpose, and distance. Sociodemographic information related to age, income, and gender was also collected.

## Survey Records, Data, and Documentation
Survey records include 1,154,167,619 trips.
DOI: 10.15483/2586486
title: 2023 University of Puerto Rico at Mayagüez National Institute for Congestion Reduction Study

description: # 2023 University of Puerto Rico at Mayagüez National Institute for Congestion Reduction Study
The 2023 University of Puerto Rico at Mayagüez National Institute for Congestion Reduction (NCIR) Study provided insight into the travel patterns and associated energy consumption of participants.

Study results helped researchers identify opportunities for the development of policies that could incentivize the use of alternative modes of travel such as transit and micromobility. Such travel modes reduce congestion by reducing the miles traveled by privately owned vehicles in urban and rural areas.

The [National Institute for Congestion Reduction](https://nicr.usf.edu/) provides multimodal congestion reduction strategies through real-world deployments that leverage advances in technology, big data science, and innovative transportation options to optimize the efficiency and reliability of the transportation system for all users.

## Data Collection Agency
The University of Puerto Rico at Mayagüez conducted the study.

## Survey Methodology
The study was conducted in Spanish.

Data collection was enabled via the open-source [NREL OpenPATH platform](https://www.nrel.gov/transportation/openpath). The resulting dataset consists of partially automated travel diaries—combining sensed and surveyed data reflecting patterns of multimodal, end-to-end, individual human mobility—as well as demographic and socioeconomic information from the 17 participants.

## Survey Records, Data, and Documentation
Study records include 17 participants. The total number of trips was 458 and total non-air-miles traveled was approximately 1,469.
DOI: 10.15483/2586487
title: 2024 University of Puerto Rico at Mayagüez Civic Innovation Challenge Study

description: # 2024 University of Puerto Rico at Mayagüez Civic Innovation Challenge Study
The 2024 University of Puerto Rico at Mayagüez Civic Innovation Challenge (CIVIC) Study provided insight into the travel patterns and associated energy consumption of participants.

Study results helped researchers identify opportunities for the development of shared mobility strategies—such as collaborative ride-sharing programs—that could address the mobility needs of rural communities in Puerto Rico.

The Civic Innovation Challenge is a multiagency, federal government research and action competition that funds ready-to-implement, research-based pilot projects that have the potential for scalable, sustainable, and transferable impact on community-identified priorities.

## Data Collection Agency
The University of Puerto Rico at Mayagüez conducted the study.

## Survey Methodology
The study was conducted in Spanish.

Data collection was enabled via the open-source [NREL OpenPATH platform](https://www.nrel.gov/transportation/openpath). The resulting dataset consists of partially automated travel diaries—combining sensed and surveyed data reflecting patterns of multimodal, end-to-end, individual human mobility—as well as demographic and socioeconomic information from the 31 participants.

## Survey Records, Data, and Documentation
Survey records include 31 participants. The total number of trips was 1,373 and the total non-air-miles traveled was approximately 8,260.
DOI: 10.15483/2586488
title: Baseline vs. DER Scenario

description: Projections and associated uncertainty estimates are generated for a variety of user-selectable EV charging sessions, electricity tariffs, subsidy levels, revenue schemes, charging station configurations, and on-site solar and/or storage options. The outputs are presented in CHIP's web portal browser in the form of easily interpretable graphics (interactive graphs and bar charts) that facilitate convenient comparison among different scenarios to aid decision-making. The user should bring assumptions for modeling on simulation planning horizon, number of EV charging sessions per year, electricity costs (energy and demand charge rates; flat versus time-of-use rate), site capital costs (equipment for EV chargers and transformer), solar PV, and battery energy storage (kW).
DOI: 10.15468/dl.sx8za3
title: Occurrence Download

description: A dataset containing 142 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Populus deltoides",
 "Country is Portugal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 142 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001338-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y9756q
title: Occurrence Download

description: A dataset containing 916 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Panthera onca"
 ]
}

 The dataset includes 916 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001339-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/uxw0kx
title: Replication Data for: Portraits of Power

description: The dataset catalogs U.S. presidents’ portraits, coding visual traits and symbolic qualities: gestures (hands clasped, holding objects), props (books, weapons, furniture), and settings (columns, drapery, interior, exterior, neutral). It highlights how attire, posture, and context convey authority, intellect, and power. Linked artist data adds detail on training, style, and background, allowing analysis of how portraiture constructs presidential image and meaning across time.
DOI: 10.15468/dl.m5ab9y
title: Occurrence Download

description: A dataset containing 5190 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sargassum muticum",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-6.6 29.26705, -6.6 50.94, 40.81373 50.94, 40.81373 29.26705, -6.6 29.26705))",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Material sample)"
 ]
}

 The dataset includes 5190 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001337-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rr9s23
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ctenopharyngodon idella (Valenciennes, 1844)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.2855 -34.7533,20.509 -34.5676,20.509 -32.9007,17.7723 -32.9007,17.8156 -33.0786,18.3471 -33.7176,18.3748 -33.8287,18.2181 -34.0492,18.3197 -34.3408,18.4452 -34.429,18.5435 -34.4213,18.5872 -34.3667,18.5363 -34.167,18.7345 -34.1508,18.7216 -34.3637,18.7808 -34.4521,19.0289 -34.4206,19.0831 -34.4835,19.2655 -34.5017,19.2032 -34.6157,19.2394 -34.6926,19.375 -34.6963,19.6091 -34.8524,19.8251 -34.8396,19.9798 -34.9064,20.1081 -34.8731,20.1517 -34.7847,20.2855 -34.7533))"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022940-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.swp54y
title: Occurrence Download

description: A dataset containing 303573 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-4.49427 36.64287,-4.43304 36.64287,-4.43304 36.70149,-4.49427 36.70149,-4.49427 36.64287))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 303573 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022900-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k2e4ng
title: Occurrence Download

description: A dataset containing 359 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Copris hispanus hispanus"
 ]
}

 The dataset includes 359 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022881-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bgbp6x
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ctenopharyngodon idella (Valenciennes, 1844)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((30.5701 -24.0715,25.5395 -24.0715,25.5395 -28.5786,30.5701 -28.5786,30.5701 -24.0715))"
 ]
}

 The dataset includes 11 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022882-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r7d4c8
title: Occurrence Download

description: A dataset containing 357 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Fusarium oxysporum Schltdl."
 ]
}

 The dataset includes 357 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022884-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.krc3p2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Quercus rubra",
 "Country is Liechtenstein",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000120-250827131500795/datasets/export for details.
DOI: 10.22002/m2mta-g3q34
title: E.coli "strain 3" G235E CheA on

description: chromosomal chemoreceptor mutant G235E "CheA on"
description: <strong>Tilt Series Date:</strong> 2012-02-10</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sandy Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> culture grown in TB medium (+GEntamycin) to OD (600) 0.31 at 30 degrees. Additional one hour incubation with penicillin before freezing.</p>
<strong>Sample Preparation:</strong> freezing with Vitrobot @ 100 % humidity, -4 offset, 3.5 s blot time, no drain, 3 µl sample, pure ethane.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-02-10-8/rawdata/</p>strain30008.mrc,  Tilt Series (Pixel Size 0.644 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-02-10-8/rawdata/strain30008.mrc"
        > <i class="download icon"></i> Download </a></p>

        strain30008_part.rec,  Reconstruction (Pixel Size 1.288 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-02-10-8/3dimage_16356/strain30008_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/h55w4-dpn87
title: Methanotroph

description: Methanotroph_starved
description: <strong>Tilt Series Date:</strong> 2013-06-22</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Methyloprofundus sedimenti</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Victoria Orphan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> starved</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-22-25/rawdata/</p>Methano_starved20001.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-22-25/rawdata/Methano_starved20001.mrc"
        > <i class="download icon"></i> Download </a></p>

        Methano_starved20001_part121_6.rec,  Reconstruction (Pixel Size 1.92 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-22-25/3dimage_32248/Methano_starved20001_part121_6.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.6084/m9.figshare.29377247.v1
title: Improved modelling of biogenic emissions in human-disturbed forest edges and urban areas

description: This dataset comprises all the data used to generate the figures in the article “Improved modelling of biogenic emissions in human-disturbed forest edges and urban areas.”
DOI: 10.6084/m9.figshare.29377247
title: Improved modelling of biogenic emissions in human-disturbed forest edges and urban areas

description: This dataset comprises all the data used to generate the figures in the article “Improved modelling of biogenic emissions in human-disturbed forest edges and urban areas.”
DOI: 10.22002/a38xb-1yv38
title: COS7 VPS4DN+pNLGFP

description: Cos7 cells transfected with VPS4DN (0.5 ug) and pNLGFP provirus construct (4 ug). Sample #C123
description: <strong>Tilt Series Date:</strong> 2012-03-28</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Cercopithecus aethiops (monkey, African green)</p>
<strong>Strain:</strong> COS-7 ATCC CRL-1651</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> VPS4DN construct provided by Wes Sundquist. pNLGFP construct provided by Irvin Chen, UCLA. Cells transfected, frozen and imaged at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> whole cells grown on grids and transfected with lipofectamine</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-03-28-37/3dimage_69166/</p>12mar28_pnlDN_C123_1_AT7BT1_0007_full.rec,  Reconstruction (Pixel Size 2.0 nm), 619.4 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        12mar28_pnlDN_C123_1_AT7BT1_0007.mrc,  Tilt Series (Pixel Size 0.5 nm), 677.3 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/k9z07-5jv10
title: Agrobacterium tumefaciens C1

description: wild type, no T4SS
description: <strong>Tilt Series Date:</strong> 2014-02-01</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
<strong>Purification / Growth Conditions / Treatment:</strong> liquid LB</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-01-54/rawdata/</p>c1_80004.mrc,  Tilt Series (Pixel Size 0.4 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-01-54/rawdata/c1_80004.mrc"
        > <i class="download icon"></i> Download </a></p>

        c1_80004.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-01-54/3dimage_49240/c1_80004.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/y345c-tdb51
title: MT310_xyl(+)_AuCl50

description: Raw data files of MT310_xyl(+)_AuCl50
description: <strong>Tilt Series Date:</strong> 2009-06-21</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach</p>
<strong>Collaborators and Roles:</strong> The MT310 strain was constructed by Martin Thanbichler; cell cultured and treated by Zhuo Li; data collected and processed by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MT310 cells were induced with xylose and treated by 50 uM AuCl for 20 hours. </p>
<strong>Sample Preparation:</strong> 10 nm gold. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-21-48/rawdata/</p>09jun21a_Au50615_056.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        09jun21a_Au50615_056_full.rec,  Reconstruction (Pixel Size 1.9 nm), 419.4 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zr2m3-zbq75
title: Hyphomonas session15 27.5KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2009-06-05</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 2°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media, chloroquine 0.1mg/ml...</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
  jsa2009-06-05-24_slicer8897.jpg: Nucleoid .  Hyphomonas neptunium
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-06-05-24/rawdata/</p>09jun05a_bx467b_054.mrc,  Tilt Series (Pixel Size 0.774 nm), 486.5 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        09jun05a_bx467b_054_part.rec,  Reconstruction (Pixel Size 1.548 nm), 419.4 MB  
        
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