cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1428626
title: Non-cationic proteins are associated with HIV neutralizing activity in genital secretions of female sex workers

description: Objective: Cationic proteins found in cervicovaginal secretions (CVS) are known to contribute to the early antiviral immune response against HIV-infection in vitro. We here aimed to define additional antiviral factors that are over-expressed in CVS from female sex workers at high risk of infection. Methods: CVS were collected from Kenyan HIV-seronegative (n=34) and HIV-seropositive (n=12) female sex workers, and were compared with those from HIV-seronegative low-risk women (n=12). The highly exposed seronegative (HESN) sex workers were further divided into those with less (n=22) or more (n=12) than three years of documented sex work. Cationic protein-depleted CVS were assessed for HIV-neutralizing activity by a PBMC-based HIV-neutralizing assay, and then characterized by proteomics. Results: HIV neutralizing activity was detected in all unprocessed CVS, however only CVS from the female sex worker groups maintained its HIV neutralizing activity after cationic protein-depletion. Differentially abundant proteins were identified in the cationic protein-depleted secretions including 26, 42, and 11 in the HESN&gt;3yr, HESN&lt;3yr, and HIV-positive groups, respectively. Gene ontology placed these proteins into functional categories including proteolysis, oxidation-reduction, and epidermal development. The proteins identified in this study include proteins previously associated with the HESN phenotype in other cohorts as well as novel proteins not yet associated with anti-HIV activities. Conclusion: While cationic proteins appear to contribute to the majority of the intrinsic HIV neutralizing activity in the CVS of low-risk women, a broader range of non-cationic proteins were associated with HIV neutralizing activity in HESN and HIV-positive female sex workers. These results indicate that novel protein factors found in CVS of women with high-risk sexual practices may have inherent antiviral activity, or are involved in other aspects of anti-HIV host defense, and warrant further exploration into their mode of action.
DOI: 10.6084/m9.figshare.1428635
title: c_picta_human_orthologs_with_id_prefix

description: C. picta human orthologs with IDs. Supplementary material to: Transcriptomic responses of the heart and brain to anoxia in the western painted turtle Authors Sarah W. Keenan, Craig A. Hill, Cyriac Kandoth, Leslie T. Buck and Daniel E. Warren PLoS ONE
DOI: 10.6084/m9.figshare.1428635.v1
title: c_picta_human_orthologs_with_id_prefix

description: C. picta human orthologs with IDs. Supplementary material to: Transcriptomic responses of the heart and brain to anoxia in the western painted turtle Authors Sarah W. Keenan, Craig A. Hill, Cyriac Kandoth, Leslie T. Buck and Daniel E. Warren PLoS ONE
DOI: 10.6084/m9.figshare.1428591
title: Multi-Dimensional Measurement of Antibody-Mediated Heterosubtypic Immunity to Influenza

description: A new multiplex assay to quickly and easily test the immune response to the seasonal influenza vaccines and heterosubtypic immunity of influenza virus.
DOI: 10.6084/m9.figshare.1428591.v1
title: Multi-Dimensional Measurement of Antibody-Mediated Heterosubtypic Immunity to Influenza

description: A new multiplex assay to quickly and easily test the immune response to the seasonal influenza vaccines and heterosubtypic immunity of influenza virus.
DOI: 10.6084/m9.figshare.1428576
title: El Clasico Tweets

description: A Set of Tweets collected during the El Clasico Event. we gathered information about all tweets posted by users after the El Clasico game. Around 3600 Users were participating in different conversations under the General Hashtag "#Elclasico".
DOI: 10.6084/m9.figshare.1428605.v1
title: Stations used in the VALUE experiment

description: R binary for the COST-VALUE predictands selected for experiment 1 adapted for 'esd'.
DOI: 10.6084/m9.figshare.1428571
title: Community del15N data sets

description: Data analyzed in: Reum, J.C.P, Jennings, S., Hunsicker, M.E. (In Press) Implications of scaled δ15N fractionation for community predator-prey body mass ratio estimates in size-structured food webs. Journal of Animal Ecology.
DOI: 10.6084/m9.figshare.1428571.v1
title: Community del15N data sets

description: Data analyzed in: Reum, J.C.P, Jennings, S., Hunsicker, M.E. (In Press) Implications of scaled δ15N fractionation for community predator-prey body mass ratio estimates in size-structured food webs. Journal of Animal Ecology.
DOI: 10.6084/m9.figshare.1428561
title: Dataset of methane and gas pressure for Experimental and Perturbation Study of Methane Production and Fatty Acid Metabolism-Distribution in Ruminal Microbiome

description: This is the full dataset of Methane and gas pressure for calculating fatty acid metobolism PT-LFER model
DOI: 10.6084/m9.figshare.1428565
title: STD Dataset for Experimental and Perturbation Study of Methane Production and Fatty Acid Metabolism-Distribution in Ruminal Microbiome

description: the full dataset after standardize
DOI: 10.6084/m9.figshare.1428562
title: Dataset for Experimental and Perturbation Study of Methane Production and Fatty Acid Metabolism-Distribution in Ruminal Microbiome

description: The origin dataset
DOI: 10.6084/m9.figshare.1428562.v2
title: Dataset for Experimental and Perturbation Study of Methane Production and Fatty Acid Metabolism-Distribution in Ruminal Microbiome

description: The origin dataset
DOI: 10.6084/m9.figshare.1428574.v1
title: European Company: to incorporate, or not to incorporate?

description: The introduction in 2001 of the European Company "Societas Europaea" (a public limited company) was a major milestone aimed at easing business activities within the EU. Since then, it is still a ‘mystery’ whether the Societas Europaea is an asset for European business. This paper examines the legal status of the Societas Europaea and its prevalence within the Community. It presents a case-study to argue that the Societas Europaea is advantageous to incorporate. However, at present, there are still only a small number of European companies that have incorporated it. This is due to its flaws, which will be outlined by this paper. It then considers amendments, which might make the Societas Europaea a more ‘popular’ option.
DOI: 10.6084/m9.figshare.1428562.v1
title: Full dataset_Origin for Experimental Study of Methane Production and Fatty Acid Metabolism in Ruminal Microbiome and PT-LFER Model of Bacteria – Rumen – Protozoa Distribution Networks of the Data

description: The origin dataset
DOI: 10.6084/m9.figshare.1428561.v1
title: Dataset of methane and gas pressure

description: This is the full dataset of Methane and gas pressure for calculating fatty acid metobolism PT-LFER model
DOI: 10.6084/m9.figshare.1428565.v1
title: Full Dataset_STD for Experimental Study of Methane Production and Fatty Acid Metabolism in Ruminal Microbiome and PT-LFER Model of Bacteria – Rumen – Protozoa Distribution Networks of the Data

description: the full dataset after standardize
DOI: 10.6084/m9.figshare.1428574.v2
title: European Company: to incorporate, or not to incorporate?

description: LLM dissertation on the European Company - Societas Europaea. The purpose of this paper is to (i) outline benefits and drawbacks of incorporating as Societas Europaea, (ii) study the numbers of incorporated European Companies and in which countries (any why) there are the most and the least of Societas Europaea, including widespread in the UK, and (iii) propose amendments to the Statute for a European company (SE).
DOI: 10.6084/m9.figshare.1428556
title: Convergence in mimicry dataset

description: Dataset and tree for Arbuckle et al.'s (2015) paper on patterns of convergence in mimicry complexes by type of mimicry.
DOI: 10.6084/m9.figshare.1428565.v3
title: STD Dataset for Experimental and Perturbation Study of Methane Production and Fatty Acid Metabolism-Distribution in Ruminal Microbiome

description: the full dataset after standardize
DOI: 10.6084/m9.figshare.1428565.v2
title: STD Dataset for Experimental Study of Methane Production and Fatty Acid Metabolism in Ruminal Microbiome and PT-LFER Model of Bacteria – Rumen – Protozoa Distribution Networks of the Data

description: the full dataset after standardize
DOI: 10.6084/m9.figshare.1428556.v1
title: Convergence in mimicry dataset

description: Dataset and tree for Arbuckle et al.'s (2015) paper on patterns of convergence in mimicry complexes by type of mimicry.
DOI: 10.6084/m9.figshare.1428574.v3
title: European Company: to incorporate, or not to incorporate?

description: LLM dissertation on the European Company - Societas Europaea. The purpose of this paper is to (i) outline benefits and drawbacks of incorporating as Societas Europaea, (ii) study the numbers of incorporated European Companies and in which countries (any why) there are the most and the least of Societas Europaea, including widespread in the UK, and (iii) propose amendments to the Statute for a European company (SE).
DOI: 10.6084/m9.figshare.1428532
title: S3 table

description: Levels of cAMP: The table represents cAMP concentration (pmol/μg protein) in Ang II treated/untreated AEC II cells.
DOI: 10.6084/m9.figshare.1428529
title: S1 table

description: Effect of Ang II on AFC: The table represents AFC percentage (of the initial volume) and FITC levels in AngII (0M, 10-10 M, 10-9 M, 10-8 M, 10-7 M and 10-6 M) treated lungs.
DOI: 10.6084/m9.figshare.1428530
title: S2 table

description: Different interventions effect on AFC: The table represents AFC percentage (of the initial volume) and FITC levels in Losartan, DP123319, Oubain, Amiloride and NE treated/untreated rats.
DOI: 10.6084/m9.figshare.1428532.v1
title: S3 table

description: Levels of cAMP: The table represents cAMP concentration (pmol/μg protein) in Ang II treated/untreated AEC II cells.
DOI: 10.6084/m9.figshare.1428529.v1
title: S1 table

description: Effect of Ang II on AFC: The table represents AFC percentage (of the initial volume) and FITC levels in AngII (0M, 10-10 M, 10-9 M, 10-8 M, 10-7 M and 10-6 M) treated lungs.
DOI: 10.6084/m9.figshare.1428530.v1
title: S2 table

description: Different interventions effect on AFC: The table represents AFC percentage (of the initial volume) and FITC levels in Losartan, DP123319, Oubain, Amiloride and NE treated/untreated rats.
DOI: 10.6084/m9.figshare.1428516
title: Influence of CdSe quantum dot on molecular/ionic relaxation phenomenon and change in physical parameters of ferroelectric liquid crystal

description: Spherical cadmium selenide (CdSe) quantum dots (QDs), capped with octadecylamine, dispersed in ferroelectric liquid crystal (FLC), can remarkably alter the electro-optical (E-O) parameters (material parameters) of the host compound. Here we present an E-O, dielectric, surface anchoring and fluorescence study demonstrating that the physical properties of host FLC strongly depend on the dopant (QD) concentration. The addition of QDs in FLC changes the surface anchoring of FLC molecules, which results the change in E-O parameters of pristine FLC as a function of QDs concentration. The ion–polarisation coupling induces a new temperature-dependent weak ionic relaxation mode (TDWIRM) in FLC–QDs mixture at a certain concentration of QDs. Dipolar coupling between CdSe QDs and FLC molecules readjust the dielectric properties and molecular/ionic relaxation phenomenon in the FLC–QDs mixtures. The fluorescence of FLC–QDs mixtures is probably due to the coupling between the exciton and photon in LC medium, which leads the radiative process. The behaviour of fluorescence property of FLC–QDs mixtures reveals that the concentration of uniform-sized QDs only changes the fluorescence intensity of the FLC–QDs mixtures.
DOI: 10.6084/m9.figshare.1428516.v2
title: Influence of CdSe quantum dot on molecular/ionic relaxation phenomenon and change in physical parameters of ferroelectric liquid crystal

description: Spherical cadmium selenide (CdSe) quantum dots (QDs), capped with octadecylamine, dispersed in ferroelectric liquid crystal (FLC), can remarkably alter the electro-optical (E-O) parameters (material parameters) of the host compound. Here we present an E-O, dielectric, surface anchoring and fluorescence study demonstrating that the physical properties of host FLC strongly depend on the dopant (QD) concentration. The addition of QDs in FLC changes the surface anchoring of FLC molecules, which results the change in E-O parameters of pristine FLC as a function of QDs concentration. The ion–polarisation coupling induces a new temperature-dependent weak ionic relaxation mode (TDWIRM) in FLC–QDs mixture at a certain concentration of QDs. Dipolar coupling between CdSe QDs and FLC molecules readjust the dielectric properties and molecular/ionic relaxation phenomenon in the FLC–QDs mixtures. The fluorescence of FLC–QDs mixtures is probably due to the coupling between the exciton and photon in LC medium, which leads the radiative process. The behaviour of fluorescence property of FLC–QDs mixtures reveals that the concentration of uniform-sized QDs only changes the fluorescence intensity of the FLC–QDs mixtures.
DOI: 10.6084/m9.figshare.1428516.v1
title: Influence of CdSe quantum dot on molecular/ionic relaxation phenomenon and change in physical parameters of ferroelectric liquid crystal

description: Spherical cadmium selenide (CdSe) quantum dots (QDs), capped with octadecylamine, dispersed in ferroelectric liquid crystal (FLC), can remarkably alter the electro-optical (E-O) parameters (material parameters) of the host compound. Here we present an E-O, dielectric, surface anchoring and fluorescence study demonstrating that the physical properties of host FLC strongly depend on the dopant (QD) concentration. The addition of QDs in FLC changes the surface anchoring of FLC molecules, which results the change in E-O parameters of pristine FLC as a function of QDs concentration. The ion–polarisation coupling induces a new temperature-dependent weak ionic relaxation mode (TDWIRM) in FLC–QDs mixture at a certain concentration of QDs. Dipolar coupling between CdSe QDs and FLC molecules readjust the dielectric properties and molecular/ionic relaxation phenomenon in the FLC–QDs mixtures. The fluorescence of FLC–QDs mixtures is probably due to the coupling between the exciton and photon in LC medium, which leads the radiative process. The behaviour of fluorescence property of FLC–QDs mixtures reveals that the concentration of uniform-sized QDs only changes the fluorescence intensity of the FLC–QDs mixtures.
DOI: 10.6084/m9.figshare.1428512
title: Prostate-Derived Ets Factor Represses Tumorigenesis and Modulates Epithelial-to-Mesenchymal Transition in Bladder Carcinoma Cells

description: raw data
DOI: 10.6084/m9.figshare.1427451
title: two triangle flash experiment

description: The experiment was to compare the visibilities of flashing lights having triangle temporal form: rising (upward triangles) or falling (downward triangles) lights. The experiment was limited to 0.4 sec duration, point source, foveal achromatic detection, in completely dark surround. The ratio of the two visibilities was the experimental goal. Five observers of very different visual capacities closely agreed on a ratio of about 1.00. A. The data of the two triangle flash experiment. B. The video used to generate the flashes.
DOI: 10.6084/m9.figshare.1427451.v1
title: two triangle flash experiment

description: The experiment was to compare the visibilities of flashing lights having triangle temporal form: rising (upward triangles) or falling (downward triangles) lights. The experiment was limited to 0.4 sec duration, point source, foveal achromatic detection, in completely dark surround. The ratio of the two visibilities was the experimental goal. Five observers of very different visual capacities closely agreed on a ratio of about 1.00. A. The data of the two triangle flash experiment. B. The video used to generate the flashes.
DOI: 10.6084/m9.figshare.1427427
title: Nutrient Limitation on the Toklat Glacier

description: 16S and 18S rDNA sequence data from the Toklat Glacier soil microcosm experiment. This experiment was a full-factorial N and P addition experiment. Sequences were generated using Illumina MiSeq. Metadata mapping files (for QIIME) are included for each data set.
DOI: 10.6084/m9.figshare.1427424
title: Data Supplement Relative Age Effect

description: Supplementary material to “Relative Age Effects in Dutch Adolescents: Concurrent and Prospective Analyses, PLoS, 2015”
DOI: 10.6084/m9.figshare.1427416
title: E-cadherin expression RNAi screen - seed based off-target analysis

description: Thise fileset accompanies the publication "Deciphering seed sequence based off-target effects in a large-scale RNAi reporter screen for E-cadherin expression" in PLOS ONE by Adams et al.
DOI: 10.6084/m9.figshare.1427411
title: Complete description of the skull and mandible of the giant mustelid <i>Eomellivora piveteaui</i> Ozansoy, 1965 (Mammalia, Carnivora, Mustelidae), from Batallones (MN10), late Miocene (Madrid, Spain)

description: ABSTRACTWe describe cranial, mandibular, and dental remains of five individuals of the giant mustelid <i>Eomellivora piveteaui</i> Ozansoy, 1965, from the late Miocene (MN10) site of Cerro de los Batallones (Madrid, Spain)—the first complete cranial remains recorded for this species and the most complete remains of the genus. This new sample enables a review of the systematic status of <i>Eomellivora</i>, leading us to accept as valid the species <i>E. piveteaui</i> Ozansoy, 1965, <i>E. wimani</i> Zdansky, 1924, <i>E. ursogulo</i> (Orlov, 1948), and <i>E. hungarica</i> Kretzoi, 1942. Our phylogenetic hypothesis indicates that <i>Eomellivora</i> is the sister taxon of the extant <i>Mellivora capensis</i> and <i>E. piveteaui</i> had a common ancestor within the crown group <i>E. wimani</i>–<i>E. ursogulo. Eomellivora piveteaui</i> was specialized for a more hypercarnivorous diet than the largest extant terrestrial mustelids, although it also had some derived bone-crushing adaptations. <i>Eomellivora piveteaui</i> had an active predatory role in the late Miocene carnivore faunas, exploiting both small and relatively large prey.SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at www.tandfonline.com/UJVP
DOI: 10.6084/m9.figshare.1427416.v1
title: E-cadherin expression RNAi screen - seed based off-target analysis

description: Thise fileset accompanies the publication "Deciphering seed sequence based off-target effects in a large-scale RNAi reporter screen for E-cadherin expression" in PLOS ONE by Adams et al.
DOI: 10.6084/m9.figshare.1427427.v1
title: new fileset

description: 16S and 18S rDNA sequence data from the Toklat Glacier soil microcosm experiment. This experiment was a full-factorial N and P addition experiment. Sequences were generated using Illumina MiSeq. Metadata mapping files (for QIIME) are included for each data set.
DOI: 10.6084/m9.figshare.1427410
title: Estimating the Riverine Abundance of Green Sturgeon Using a Dual-Frequency Identification Sonar

description: To determine the total number of Green Sturgeon <i>Acipenser medirostris</i> present in the Rogue River, Oregon, we compared plot sampling using a dual-frequency identification sonar (DIDSON), a density-based estimation technique combining the number of individuals detected and the area sampled, to a concurrent mark–recapture estimate. Using the DIDSON-based method, we estimated the total abundance of Green Sturgeon to be 223 (95% confidence interval = 180–266). The mark–recapture method resulted in an estimate of 236 individuals (150–424). The noninvasive DIDSON transect estimates resulted in tighter confidence intervals and required fewer technician hours to collect the data than did the mark–recapture method (37 h versus 232 h, respectively). Precise estimates of the abundance and distribution of Green Sturgeon are important components to species recovery and management. Thus, this new technique has the potential to greatly improve population monitoring and is an excellent tool to identify occupied habitats.Received June 9, 2014; accepted January 28, 2015
DOI: 10.6084/m9.figshare.1427410.v2
title: Estimating the Riverine Abundance of Green Sturgeon Using a Dual-Frequency Identification Sonar

description: To determine the total number of Green Sturgeon <i>Acipenser medirostris</i> present in the Rogue River, Oregon, we compared plot sampling using a dual-frequency identification sonar (DIDSON), a density-based estimation technique combining the number of individuals detected and the area sampled, to a concurrent mark–recapture estimate. Using the DIDSON-based method, we estimated the total abundance of Green Sturgeon to be 223 (95% confidence interval = 180–266). The mark–recapture method resulted in an estimate of 236 individuals (150–424). The noninvasive DIDSON transect estimates resulted in tighter confidence intervals and required fewer technician hours to collect the data than did the mark–recapture method (37 h versus 232 h, respectively). Precise estimates of the abundance and distribution of Green Sturgeon are important components to species recovery and management. Thus, this new technique has the potential to greatly improve population monitoring and is an excellent tool to identify occupied habitats.Received June 9, 2014; accepted January 28, 2015
DOI: 10.6084/m9.figshare.1427410.v1
title: Estimating the Riverine Abundance of Green Sturgeon Using a Dual-Frequency Identification Sonar

description: To determine the total number of Green Sturgeon <i>Acipenser medirostris</i> present in the Rogue River, Oregon, we compared plot sampling using a dual-frequency identification sonar (DIDSON), a density-based estimation technique combining the number of individuals detected and the area sampled, to a concurrent mark–recapture estimate. Using the DIDSON-based method, we estimated the total abundance of Green Sturgeon to be 223 (95% confidence interval = 180–266). The mark–recapture method resulted in an estimate of 236 individuals (150–424). The noninvasive DIDSON transect estimates resulted in tighter confidence intervals and required fewer technician hours to collect the data than did the mark–recapture method (37 h versus 232 h, respectively). Precise estimates of the abundance and distribution of Green Sturgeon are important components to species recovery and management. Thus, this new technique has the potential to greatly improve population monitoring and is an excellent tool to identify occupied habitats.Received June 9, 2014; accepted January 28, 2015
DOI: 10.6084/m9.figshare.1427411.v3
title: Complete description of the skull and mandible of the giant mustelid <i>Eomellivora piveteaui</i> Ozansoy, 1965 (Mammalia, Carnivora, Mustelidae), from Batallones (MN10), late Miocene (Madrid, Spain)

description: ABSTRACTWe describe cranial, mandibular, and dental remains of five individuals of the giant mustelid <i>Eomellivora piveteaui</i> Ozansoy, 1965, from the late Miocene (MN10) site of Cerro de los Batallones (Madrid, Spain)—the first complete cranial remains recorded for this species and the most complete remains of the genus. This new sample enables a review of the systematic status of <i>Eomellivora</i>, leading us to accept as valid the species <i>E. piveteaui</i> Ozansoy, 1965, <i>E. wimani</i> Zdansky, 1924, <i>E. ursogulo</i> (Orlov, 1948), and <i>E. hungarica</i> Kretzoi, 1942. Our phylogenetic hypothesis indicates that <i>Eomellivora</i> is the sister taxon of the extant <i>Mellivora capensis</i> and <i>E. piveteaui</i> had a common ancestor within the crown group <i>E. wimani</i>–<i>E. ursogulo. Eomellivora piveteaui</i> was specialized for a more hypercarnivorous diet than the largest extant terrestrial mustelids, although it also had some derived bone-crushing adaptations. <i>Eomellivora piveteaui</i> had an active predatory role in the late Miocene carnivore faunas, exploiting both small and relatively large prey.SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at www.tandfonline.com/UJVP