cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26384305.v1
title: Figure 1: Bactericidal activity of Peptoids TM1, TM5, and TM6

description: Relative luminescence (A) and CFUs/mL (B) for P. aeruginosa Xen41 treated with 2-fold dilutions of TM1, TM5, and TM6. (A) TM1, TM5, and TM6 were all significantly different from the no treatment control with respect to their relative luminescence at concentrations of 1 μg/ml and higher. (B) TM1 was significantly different from the no treatment control for CFUs/mL at concentrations of 0.5 μg/mL and above, while TM5 and TM6 were significantly different at 2 and 4 μg/ml respectively. Data points are represented as means (n = replicates). Error is shown in ± standard deviation (SD). Statistics were performed using 2-way ANOVA, comparing antimicrobial to no treatment control. P values are: &lt;0.001 = ***, between 0.001 and 0.01 = **, and between 0.01 and 0.05 = *.
DOI: 10.15468/dl.bajck8
title: Occurrence Download

description: A dataset containing 20376 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hyacinthoides hispanica (Mill.) Rothm.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 20376 records from 304 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013147-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25405/data.ncl.9883115.v1
title: 3. Expanded Interiors - Exhibition at Pompeii - ReadMe file collection: spreadsheet of contents

description: This document is a contents page and guide for using the <i>Expanded Interiors</i> Collection <b>Exhibition at Pompeii</b>. Please read in conjunction with the <b>Project Overview Metadata, Metadata Technical Method </b>and <b>Metadata for collection</b>. This document includes:Spreadsheet of all <i>Expanded Interiors</i> Collections; Content of <b>Exhibition at Pompeii</b> (highlighted within the spreadsheet); File labelling guide; Casa del Criptoportico – Room numbers & direction reference guide
DOI: 10.6084/m9.figshare.13501689.v1
title: Scripts

description: Scripts
DOI: 10.6084/m9.figshare.20284713.v1
title: Data availability for Mirusviricota and the GOEV database

description: Data availability includes supplemental tables, FASTA files corresponding to the GPEV genomic database, genes, proteins, and phylogenetic trees.
DOI: 10.17632/cr5dfc4mnk
title: Intracellular metabolomics of control and ca-Acvr1(A11) mutant nasal process cells

description: To probe for possible effects of elevated BMP signaling in CNCCs through constitutively activated ACVR1 (ca-ACVR1) at the metabolite level, we performed quantitative metabolomic profiling of control and ca-Acvr1(A11) mutant nasal process cells.
DOI: 10.17632/hgctmx9y6c
title: Deep Learning and Remote Sensing Dataset For Turkey's Wildfire 2021 Multispectral Sentinel-2 Satellite Imagery

description: Wildfire maps are useful in understanding the growth of burned areas, change detection in vegetation, and decision-making. Wildfire is a complex exercise and is hard to capture using traditional means. The dataset consists of two folders; Train Images and Train Masks. Each image in train images folder has a size of 128*128 pixels and consists of three multispectral bands. The image is saved using the Universal Transverse Mercator (UTM) as the coordinate system, and GeoTiff as a format file. The image has a spatial resolution of 0.00025 degrees. The values of each pixel are saved in a 16-bit unsigned integer with a range of 0 to 65,535. The dataset has 25,563 images containing the burned area's objects. In train masks folder each image is a binary annotation image that consists of two classes; burned area as the foreground and the non-burned area as the background. These binary images are saved in 8-bit unsigned integer where the burned area is indicated by the pixel value of 1, whereas the non-burned area is indicated by 0.
DOI: 10.6084/m9.figshare.4644424.v5
title: AmphiBIO_v1

description: Current ecological and evolutionary research are increasingly moving from species- to trait-based approaches because traits provide a stronger link to organism’s function and fitness. Trait databases covering a large number of species are becoming available, but such data remains scarce for certain groups. Amphibians are among the most diverse vertebrate groups on Earth, and constitute an abundant component of major terrestrial and freshwater ecosystems. They are also facing rapid population declines worldwide, which is likely to affect trait composition in local communities, thereby impacting ecosystem processes and services. In this context, we introduce AmphiBIO, a comprehensive database of natural history traits for amphibians worldwide. The database releases information on 17 traits related to ecology, morphology and reproduction features of amphibians. We compiled data from more than 1,500 literature sources, and for more than 6,500 species of all orders (Anura, Caudata and Gymnophiona), 61 families and 531 genera. This database has the potential to allow unprecedented large-scale analyses in ecology, evolution and conservation of amphibians.
DOI: 10.6084/m9.figshare.7473191.v2
title: Predicting energy cost from wearable sensors: A dataset of energetic and physiological wearable sensor data from healthy individuals performing multiple physical activities

description: This dataset presents energetic and wearable physiological sensor data from ten healthy subjects performing six physical activities. The activities tested were: walking, incline walking, backwards walking, and running on a treadmill, cycling on a stationary bike, and stair climbing on a stairmill -- all at a variety of speeds and/or intensities (21 total conditions). The following physiological signals were collected from wearable sensors while subjects performed all the activities: - Oxygen consumption and carbon dioxide production- Respiratory exchange ratio- Breath frequency- Minute ventilation - Oxygen saturation (SpO<sub>2</sub>)- Heart rate- Electrodermal activity- Skin temperature - Accelerations, angular velocity, and magnetic field measured from left/right wrist, left/right ankle, left/right foot, pelvis, and chest (IMUs)- Surface EMG from left/right gluteus maximus, rectus femoris, vastus lateralis, semitendinosis, biceps femoris, medial gastrocnemius, soleus, tibialis anterior<br>The data are contained in ten (10) Matlab .mat files (one for each subject). For a complete description of experimental methods and file structure please see the file: CompleteDataDescription_Ingraham_Ferris_Remy_2018.PDF<br>Please direct any correspondence to: Kimberly Ingraham (kaingr@umich.edu)<br><br><br>
DOI: 10.6084/m9.figshare.1320529.v1
title: Dataset: Physical Intelligence Experiments

description: Referenced in: Range-based techniques for discovering optimality and analyzing scaling relationships in neuromechanical systems, Nature Precedings, 2845.v1 (2009) and Performance augmentation in hybrid bionic systems: techniques and experiment, arXiv:0810.4629 (2008) and Naturally Supervised Learning in Manipulable Technologies, arXiv:1106.1105 (2011).
DOI: 10.6084/m9.figshare.14910396.v1
title: Marine Biofouling Resistance Rating using Image Analysis - Supplemental material

description: Supplemental material for the article Marine Biofouling Resistance Rating using Image Analysis. The supplemental material includes the pixel classification file for ilastik (Segmentation_Tiff_article), data for the pixel classification model (Data_ilastik), the test images used in the article (Original test images), and results generated in relation to the article (Bar charts).
DOI: 10.6084/m9.figshare.19679520.v1
title: Quantitative transcript expression data of hypoxia experimental data sets with FANTOM-CAT

description: Quantitative transcript expression data of hypoxia experimental data sets with FANTOM-CAT
DOI: 10.6084/m9.figshare.28673411.v2
title: Supporting Dataset S3

description: Supporting Dataset S3. Excel Workbook containing several spreadsheets used to list tips in phylogenomics and phylogenetic trees. The spreadsheets contain the information used to replace tip labels in trees within FigTree, as well as the relationship between old and new locus tags assigned by NCBI for the sHy2 and sMoj genome assemblies.
DOI: 10.6084/m9.figshare.1153783.v1
title: Oscillation data

description: From manuscript: Development of emulsification resistant heavier-than-water tamponade using high molecular weight silicone oil polymers
DOI: 10.6084/m9.figshare.6885236.v1
title: Organ-wide profiling in mouse reveals high editing levels of Filamin B mRNA in the musculoskeletal system

description: Adenosine to inosine RNA editing in protein-coding messenger RNAs (mRNAs) potentially leads to changes in the amino acid composition of the encoded proteins. The mRNAs encoding the ubiquitously expressed actin-crosslinking proteins Filamin A and Filamin B undergo RNA editing leading to a highly conserved glutamine to arginine exchange at the identical position in either protein. Here, by targeted amplicon sequencing we analysed the RNA editing of Filamin B across several mouse tissues during post-natal development. We find highest filamin B editing levels in skeletal muscles, cartilage and bones, tissues where Filamin B function seems most important. Through the analysis of Filamin B editing in mice deficient in either ADAR1 or 2, we identified ADAR2 as the enzyme responsible for Filamin B RNA editing. We show that in neuronal tissues Filamin B editing drops in spliced transcripts indicating regulated maturation of edited transcripts. We show further that the variability of Filamin B editing across several organs correlates with its mRNA expression.
DOI: 10.17632/bc5vxdmnk9
title: Theoretical simulations of FeSi alloys with different Si content using Factsage 8.3

description: The data includes the equilibrium calculations and the phase diagrams done during the investigation of the impact of the Si content in FeSi system. Different percentages of Si in FeSi alloy leads to the formation of different phases. The equilibrium calculations were done using Factsage 8.3. The alloys of certain composition were cooled from an initial temperature of 1500 C to a temperature of 50 C. Phase diagrams were calculated using the phase diagram module of Factsage.
DOI: 10.17632/cdxmjzwp24
title: Development and psychometric validation of an instrument to assess knowledge of the aetiology, prevention and treatment of venous leg ulcers in undergraduate nursing students.

description: The following section reflect the stage of development and validation of the instrument: psychometric evaluation. In the latter, the classical analysis of the items, the analysis of the psychometric properties according to the Rasch model and differential analysis of item functioning (DIF), analysis of construct validity by means of hypothesis testing in known groups and analysis of reliability by internal consistency were carried out.
DOI: 10.17632/wcc46fhff8
title: Data for: Relationships between individual animal variation in dry matter intake and animal performance and feed efficiency

description: The supplementary material contains data used for the publication "Relationships between individual animal variation in dry matter intake and animal performance and feed efficiency" (DOI: 10.15232/aas.2024-02583). This manuscript presents associations between animal variation in dry matter intake with growth performance, feed efficiency indexes, and carcass characteristics.
DOI: 10.6084/m9.figshare.1612170.v5
title: Guide to the treatment of cancer pain in South Africa

description: <b>Citation: </b>Blanchard C, Chetty S, Ganca L, Gwyther E, Hodgson E, Kamerman P, Meiring M, Vinay S, Webb D. Guide to the treatment of cancer pain in South Africa. MedSpec Publishing, Centurian, 2015. DOI: 10.6084/m9.figshare.1612170.v2.<b>About: </b>Palliative care, including effective management of cancer pain, is recognised under international law as a human right. Pain management can and should be delivered from the time of cancer diagnosis. This care is inexpensive, safe and effective and can be delivered in a variety of settings including hospitals, outpatient clinics, residential hospices, nursing homes, community health centers and at home. However, cancer pain is frequently inadequately treated. and healthcare providers often feel insufficiently prepared to assess and manage cancer pain. The purpose of this guideline is to assist members of all healthcare professions in South Africa to optimise patient care within the limitations of their resources, aiming to reduce suffering while maintaining quality of life and dignity. <b>Endorsed by: </b>Gauteng Centre of Excellence for Palliative Care / Wits Centre for Palliative Care, PainSA, Hospice Palliative Care Association, Palliative Treatment for Children – South Africa, Family Medicine Division of the University of Cape Town, South African Society of Clinical and Radiation Oncology, and South African Society of Anaesthesiologists.
DOI: 10.6084/m9.figshare.4308905.v1
title: Exploring the Motivations for Punishment: Framing and Country-Level Effects

description: These are the data to accompany the publication: Bone JE, McAuliffe K, Raihani NJ (2016) Exploring the Motivations for Punishment: Framing and Country-Level Effects. PLoS ONE 11(8): e0159769. doi:10.1371/journal.pone.0159769<br>
DOI: 10.17632/7dsxgffjby
title: Data for: Non-evaporative heat dissipation across the beaks and casques of large forest hornbills

description: Beak and skin surface temperatures measured over a range of air temperatures in three species of Afrotropical forest hornbills by infrared thermography.
DOI: 10.17632/gskn7ys9ph
title: Code and Data accompanying a paper entitled "Earthquake Cycles and Seismic Source Processes on Carbonate Faults: Insights from Microphysically-based Modeling"

description: This dataset provides the numerical codes and simulation outputs accompanying the submitted paper entitled “Earthquake Cycles and Seismic Source Processes on Carbonate Faults: Insights from Microphysically-based Modeling.” In this study, I extend an existing earthquake rupture nucleation model to simulate the full seismic cycle, with a focus on internal deformation mechanisms.

Using a spring-slider framework implemented in the finite element package COMSOL (Version 3.5a), the model simulates natural earthquake behavior on faults in carbonate rock masses. In this study, I explore 1) Frictional Behavior with Velocity and Depth; 2) Cyclic Earthquake Behavior at Depth. Overall, our simulations underscore the importance of internal deformation processes in governing fault friction and provide supporting evidence for impulsive, self-healing rupture dynamics.

This is a theoretical study; no experimental data were generated. The dataset includes:
Code Files
The modeling was conducted using COMSOL Multiphysics (v3.5a). Five simulation files in .mph format are provided:

1) Spring-slider of Natural Fault_steady state_nucleation+hv – Simulates steady-state behavior from nucleation to seismic slip.

2) Spring-slider of Natural Fault_one_event (Yoffe function) – Simulates a passive earthquake event initiated via a Yoffe function.

3) Spring-slider of Natural Fault_one_event (Stress Perturbation) – Simulates a passive earthquake event triggered by a stress perturbation.

4) Spring-slider of Natural Fault (EQ cycles)_ref – Simulates full earthquake cycles without slip localization.

5) Spring-slider of Natural Fault (EQ cycles)_localization – Simulates earthquake cycles including slip zone localization.

Result Files
Numerical output is organized into four compressed .rar archives:

1) Results-steady state.rar – Output for steady-state simulations.

2) Results-one event from Nature Yoffe.rar – Output from the Yoffe-triggered passive earthquake simulation.

3) Results-one event from Nature Perturbation.rar – Output from the stress-perturbation-triggered earthquake simulation.

4) Results-EQ cycles.rar – Contains results from all earthquake cycle simulations, with and without slip localization.

Each archive includes time-series data for the following key variables:

1) Friction coefficient (Tau vs time.txt)

2) Temperature (T vs time.txt)

3) Porosity (Phi_sb vs time.txt)

4) Logarithmic grain size (logd vs time.txt)

5) Logarithmic slip velocity (logV vs time.txt)

These datasets are provided to support reproducibility and further exploration by the community.
DOI: 10.17632/yz8k4p66mt
title: Mispricing R2

description: This dataset provides the Mispricing R² measure for 41 global equity markets over the period from January 1994 to June 2021. Mispricing R² is a novel proxy for systematic mispricing in international markets, capturing the extent of market inefficiency derived from market frictions and behavioral biases.
The measure is constructed using an instrumented principal component analysis (IPCA) approach based on 11 standard mispricing anomalies: net stock issues, composite equity issues, accruals, net operating assets, asset growth, investment to assets, distress, O-score, momentum, gross profitability, and return on assets.
DOI: 10.6084/m9.figshare.15002214.v1
title: Fly seizure EEG: field potential activity in the <i>Drosophila</i> brain

description: Hypersynchronous neural activity is a characteristic feature of seizures. Although many <i>Drosophila</i> mutants of epilepsy-related genes display clear behavioral spasms and motor unit hyperexcitability, field potential measurements of aberrant hypersynchronous activity across brain regions during seizures have yet to be described. Here, we report a straightforward method to observe local field potentials (LFPs) from the <i>Drosophila</i> brain to monitor ensemble neural activity during seizures in behaving tethered flies. High frequency stimulation across the brain reliably triggers a stereotypic sequence of electroconvulsive seizure (ECS) spike discharges readily detectable in the dorsal longitudinal muscle (DLM) and coupled with behavioral spasms. During seizure episodes, the LFP signal displayed characteristic large-amplitude oscillations with a stereotypic temporal correlation to DLM flight muscle spiking. ECS-related LFP events were clearly distinct from rest- and flight-associated LFP patterns. We further characterized the LFP activity during different types of seizures originating from genetic and pharmacological manipulations. In the ‘bang-sensitive’ sodium channel mutant <i>bangsenseless</i> (<i>bss</i>), the LFP pattern was prolonged, and the temporal correlation between LFP oscillations and DLM discharges was altered. Following administration of the pro-convulsant GABA<sub>A</sub> blocker picrotoxin, we uncovered a qualitatively different LFP activity pattern, which consisted of a slow (1-Hz), repetitive, waveform, closely coupled with DLM bursting and behavioral spasms. Our approach to record brain LFPs presents an initial framework for electrophysiological analysis of the complex brain-wide activity patterns in the large collection of <i>Drosophila</i> excitability mutants.
DOI: 10.6084/m9.figshare.23551446.v1
title: Supplementary Material for: Non-surgical site pain in women following breast cancer surgery: a systematic review and meta-analysis

description: Background: Chronic pain after breast cancer surgery affects up to 60% of patients. Evidence supports the fact that pain out-with the surgical site is a significant issue. This systematic review and meta-analysis sought to evaluate the prevalence of non-surgical site pain (NSSP) in women after breast cancer surgery at 6 months post-operatively. Methods: Adult women with a confirmed breast cancer diagnosis who had undergone breast cancer surgery were identified. The outcome pursued was pain out-with the surgical site measured on either NRS/VRS or VAS rating scale. CENTRAL, Embase, PubMed, MEDLINE, CINAHL, PsycInfo, Web of Science (WoS) and Scopus were searched to identify studies that examined NSSP after breast cancer surgery at 6 months. Data was gathered via pre-piloted Excel forms and analysed both quantitively and qualitatively. Meta-analysis was carried out using a random effects model to assess risk difference with 95% confidence interval (CI). Results: A total of sixteen studies were identified for inclusion. Eleven studies failed to provide sufficient data and consequently were analysed qualitatively. Five studies were adequate for quantitative analysis, including a total of 995 patients. Meta-analysis identified a risk difference of 18% (95%CI: 5 to 31%) between patients who had breast cancer surgery and a reference, however this is low quality evidence. Conclusion: This review has highlighted that breast cancer surgery increases the risk of pain out-with the surgical site post-operatively. It was additionally identified that NSSP data is often gathered in research yet rarely presented in results or highlighted as a primary outcome. As quality of evidence was low, research specifying NSSP as a primary outcome is required to provide more certainty.
DOI: 10.6084/m9.figshare.23575932.v1
title: GRAPE dataset: json files

description: The “json” file contains 631 original annotation files in JSON format, that record the XY coordinates. The naming method is consistent with the images, in the format “subject number_laterality_visit number. json”. The JSON file can be opened using Notebook and some label tool software.
DOI: 10.6084/m9.figshare.3544511.v1
title: Appendix B. Details of the observational study.

description: Details of the observational study.
DOI: 10.17632/44bygxg8w3
title: Enterprise Architecture in Healthcare Systems: A systematic literature review

description: This work presents a deep and broad Systematic Literature Review (SLR) to select studies demonstrating current EA practices in healthcare systems. The researchers established an SLR protocol returning 280 primary studies after the first step of the Data Selection and a consolidated inclusion of 46 articles after the second step. They assessed the level of disagreement during the team's evaluations using Cohen's Kappa. This SLR revealed essential aspects of state-of-the-art EA application in healthcare systems, such as the most used methodologies and tools, best practices, and criteria considered for their choice. It also analyzed the main positive impacts, challenges, and critical success factors described by the studies' authors based on empirical approaches. Besides, this work brings the main publication channels and the most influential authors on the topic of EA in Healthcare systems.
DOI: 10.6084/m9.figshare.26319373.v2
title: GWRF - DIC

description: Ordinary Least Square Regression (OLS), Geographically Weighted Regression (GWR), Random Forest (RF) and Geographically Weighted Random Forest (GWRF) analyzes were carried out and evaluated to verify the model with the best performance capable of identifying the locations most affected by the disease. disease based on a set of predictors composed of procedural variables and access to healthcare.
DOI: 10.6084/m9.figshare.8791778.v1
title: Manipulation_check_self_worth

description: Results of manipulation check. Participants completed (1) Scales Measuring Agency and Communion, then (2) reflected on situations when they either did something in line of their moral standards or outperformed other people in something. Afterwards (3) they completed three subscales of Crocker's Contingencies of Self-Worth (Virtue, Competition and Approval from others).<br>
DOI: 10.6084/m9.figshare.25991932.v1
title: Supplementary information relating to sago palm comparative dataset study collected at different sago palm plantations in Mukah, Sarawak, Malaysia

description: The study aimed to determine the responsible genes resulting in normal phenotype (trunking) sago palm by attaining leaf samples from all trunking sago palms from different sago palm plantations in Mukah, Sarawak, Malaysia