cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/7yhdmmpf6h
title: Measurement of Grain Bulk Modulus on Sandstone Samples from the Norwegian Continental Shelf

description: The data include 38 sandstone samples in three fields from the Norwegian continental shelf. Grain bulk modulus is measured at the unjacketed condition. Raw strain-stress data can be found in "Strain_stress_unjacketed_38_sandstone_samples.csv". Measured grain bulk modulus (GPa) with sample porosity (V/V), density (g/cm3), air permeability (10^(-15) m^2 or micro Darcy), and formation temperature (Celcius degree) are compiled in "Grain_bulk_modulus_38_sandstone.csv". Mineralogic composition by weight is provided for 9 sandstone samples in "XRD_9_sandstone_samples.csv".
DOI: 10.6084/m9.figshare.12380651.v1
title: Gene database of Escherichia coli ATCC 11775

description: <i>Escherichia coli</i> is a rod-shaped, Gram-negative bacterium that could subsist on a variety of substrates. A commensal in the human gastrointestinal tract, some strains of the bacterium are also opportunistic pathogens. But, most importantly, <i>E. coli</i> is a well-studied microorganism that have found uses in many areas of biotechnology. This work reports the gene database of <i>E. coli</i> ATCC 11775. Using the annotated genome downloaded from GenBank, this work uses an in-house MATLAB parsing software to read, extract and build a gene database of the bacterium comprising gene identifier, gene function, and gene sequence of all genes in the genome of the bacterium. The gene database should find use in a variety of genome editing and molecular cloning workflows seeking to uncover additional mysteries of this biotechnology workhorse.
DOI: 10.6084/m9.figshare.14211290.v1
title: mBio_Wang_etal_2020_supplement_TableS15

description: <b>Supplemental Table S15. Gene ontology (GO) terms enriched within each co-expression module. </b>Each module is denoted as “MEX_component/process/function” in separate tabs. The columns of each page include “GOID”, “GO term”, “Cluster frequency” to indicate the number of genes within the GO term among the 2036 identically expressed genes, “background Frequency” to indicate the total number of 6473 annotated genes in the <i>C. albicans </i>genome assigned to that GO term, “Corrected p-value” “False Discovery Rate”, “Genes annotated to the term” to define the genes that contribute to the “Cluster Frequency” column, and “Directly Annotated GOID list” includes the list of GO IDs connected to the GO ID in that row.
DOI: 10.6084/m9.figshare.4910099.v1
title: Combining Disparate Data Sources for Improved Poverty Prediction and Mapping - Environment Data

description: Environmental Data from the paper 'Combining Disparate Data Sources for Improved Poverty Prediction and Mapping' (Pokhriyal and Jacques, 2017, www.pnas.org/cgi/doi/10.1073/pnas.1700319114).<br>For data sources, see Table S1 in the supplementray information provided with the paper.<br>LEGEND<br> LC11 Post-flooding or irrigated croplands (or aquatic) LC14 Rainfed croplands LC20 Mosaic cropland (50-70%) / vegetation (grassland/shrubland/forest) (20-50%) LC30 Mosaic vegetation (grassland/shrubland/forest) (50-70%) / cropland (20-50%) LC40 Closed to open (&gt;15%) broadleaved evergreen or semi-deciduous forest (&gt;5m) LC50 Closed (&gt;40%) broadleaved deciduous forest (&gt;5m) LC60 Open (15-40%) broadleaved deciduous forest/woodland (&gt;5m) LC70 Closed (&gt;40%) needleleaved evergreen forest (&gt;5m) LC90 Open (15-40%) needleleaved deciduous or evergreen forest (&gt;5m) LC100 Closed to open (&gt;15%) mixed broadleaved and needleleaved forest (&gt;5m) LC110 Mosaic forest or shrubland (50-70%) / grassland (20-50%) LC120 Mosaic grassland (50-70%) / forest or shrubland (20-50%) LC130 Closed to open (&gt;15%) (broadleaved or needleleaved, evergreen or deciduous) shrubland (&lt;5m) LC140 Closed to open (&gt;15%) herbaceous vegetation (grassland, savannas or lichens/mosses) LC150 Sparse (&lt;15%) vegetation LC160 Closed to open (&gt;15%) broadleaved forest regularly flooded (semi-permanently or temporarily) - Fresh or brackish water LC170 Closed (&gt;40%) broadleaved forest or shrubland permanently flooded - Saline or brackish water LC180 Closed to open (&gt;15%) grassland or woody vegetation on regularly flooded or waterlogged soil - Fresh, brackish or saline water LC190 Artificial surfaces and associated areas (Urban areas &gt;50%) LC200 Bare areas LC210 Water bodies LC220 Permanent snow and ice LC230 No data (burnt areas, clouds,…) <br> <br> Bio_10 Mean Temperature of Warmest Quarter Bio_11 Mean Temperature of Coldest Quarter Bio_12 Annual Precipitation Bio_13 Precipitation of Wettest Month Bio_14 Precipitation of Driest Month Bio_15 Precipitation Seasonality (Coefficient of Variation) Bio_16 Precipitation of Wettest Quarter Bio_17 Precipitation of Driest Quarter Bio_18 Precipitation of Warmest Quarter Bio_19 Precipitation of Coldest Quarter Bio_1 Annual Mean Temperature Bio_2 Mean Diurnal Range (Mean of monthly (max temp - min temp)) Bio_3 Isothermality (BIO2/BIO7) (* 100) Bio_5 Max Temperature of Warmest Month Bio_6 Min Temperature of Coldest Month Bio_7 Temperature Annual Range (BIO5-BIO6) Bio_8 Mean Temperature of Wettest Quarter Bio_9 Mean Temperature of Driest Quarter
DOI: 10.6084/m9.figshare.29150546.v1
title: Longevity of Trissolcus japonicus

description: To evaluate the female longevity of the Beijing USDA and Manno lines of <i>T. japonicus</i>, as well as their hybrids, female wasps were isolated upon emergence and maintained at 25±1°C, 50-90% RH and a 16L:8D photoperiod. Females were provided either with food (honey) or just water. For the treatment with food, two to four females from each female isoline of the F2 and F3 generations were maintained together in 0.025l vials sealed with sponges (n = 96 ♀ / parental or hybrid line). A drop of liquid honey on the sponge served as food, and a small piece of cellulose paper was added to provide hiding spaces. For the ‘water only’ treatment, four female wasps from each female isoline of the F1 and F3 generations were individually placed in small Petri dishes (5cm diameter) containing water-soaked cotton rolls (n = 96 ♀ / parental or hybrid line). Food and water supplies were replenished three times weekly. At the same time wasp survival was recorded and dead individuals were removed. Longevity was calculated as the average lifespan per female isoline and filial generation. Since in some cases wasps were lost over the duration of the experiment due to unnatural reasons (e.g., wasps were stuck in the honey) the number of replicates per line and generation varied between 79 and 96.
DOI: 10.17632/8wxhhykfnh
title: Transcriptomic signatures of SARS-CoV-2 and Influenza virus infections

description: Blood gene-expression was measured in 103 patients infected with SARS-CoV-2 (collectively named “COVID-19”) and compared to that of 22 patients infected with Influenza A or B (INFL) as well as 27 non-infected, healthy individuals (HLTY) COVID-19 patients were stratified according to the level of respiratory failure; 23 did not require oxygen support (“OXY0”), 40 received oxygen but no mechanical ventilation (“OXY1”) and 40 required mechanical ventilation (“TUBE”). In the latter group, 15 patients were sampled within the first 7 days in hospital (“TUBE early”) while 25 were sampled later (“TUBE late”).
DOI: 10.6084/m9.figshare.1217526.v1
title: Little Effort, Little Reward: The surprising role of semantic ambiguity in humor elicitation

description: Data from Participants 7-9
DOI: 10.6084/m9.figshare.6265640.v2
title: Patient28

description: Female Patient with 183 slice of pulmonary embolism CT-Angiography.
DOI: 10.6084/m9.figshare.13215308.v1
title: CFID-AFLOW-2

description: JARVIS-DFT
DOI: 10.6084/m9.figshare.28286747.v1
title: <b>Alzheimers_Disease_Dataset</b>

description: Deep Learning Type Convolution Neural Network Architecture for Multiclass Classification of Alzheimer’s Disease
DOI: 10.6084/m9.figshare.3792189.v4
title: Contentious relationships in phylogenomic studies can be driven by a handful of genes

description: Phylogenomic studies have resolved countless branches of the tree of life (ToL), but remain strongly contradictory on certain, contentious relationships. Here, we employ a maximum likelihood framework to quantify the distribution of phylogenetic signal among genes and sites for 17 contentious branches and 6 well-established control branches in plant, animal, and fungal phylogenomic data matrices. We find that resolution in some of these 17 branches rests on a single gene or a few sites, and that removal of a single gene in concatenation analyses or a single site from every gene in coalescence-based analyses diminishes support and can alter the inferred topology. These results suggest that tiny subsets of very large data matrices drive the resolution of specific internodes, providing a dissection of the distribution of support and observed incongruence in phylogenomic analyses. We submit that quantifying the distribution of phylogenetic signal in phylogenomic data is essential for evaluating whether branches, especially contentious ones, are truly resolved. Finally, we offer one detailed example of such an evaluation for the controversy regarding the earliest-branching metazoan phylum, where examination of the distributions of gene-wise and site-wise phylogenetic signal across 8 data matrices consistently supports ctenophores as sister group to all other metazoans.<br>
DOI: 10.6084/m9.figshare.22292659.v1
title: scRNA data3

description: We characterized the immune context in HPV+ and HPV− HNSCC by integrating scRNA-seq and bulk RNA-seq data.
DOI: 10.17632/4p2jdcp378
title: Codes and Data Package: Covid-19 Fiscal Support and its Effectiveness

description: This package contains the data as well as the Matlab files needed to replicate the empirical findings in "Covid-19 Fiscal Support and its Effectiveness", Economics Letters 205, pp. 109939/1–5: https://doi.org/10.1016/j.econlet.2021.109939 Abstract: This paper uses a threshold-augmented Global VAR model to quantify the macroeconomic effects of countries' discretionary fiscal actions in response to the Covid-19 pandemic and its fallout. Our results are threefold: (1) fiscal policy is playing a key role in mitigating the effects of the pandemic; (2) all else equal, countries that implemented larger fiscal support are expected to experience less output contractions; (3) emerging markets are also benefiting from the synchronized fiscal actions globally through the spillover channel and reduced financial market volatility.
DOI: 10.6084/m9.figshare.11808972.v1
title: (PART 5 OF 5) 9 molecular dynamics simulations (500ps 3 x 3 replicates) of coronavirus 2019-nCoV protease unrefined crystal structure in complex with 3 different conformations of lopinavir.

description: See part 1.<br>Part 5 of 5:XHD_LC3c
DOI: 10.6084/m9.figshare.23574906.v3
title: IEEE14 bus data

description: The IEEE 14-bus test system is given.
DOI: 10.6084/m9.figshare.28638464.v1
title: NLID

description: This data presents the means and standard deviations of the changes observed in each dimension of the NLID (New Learning and Instructional Design) framework before and after the intervention, as well as the change in delay time for practical implementation. The differences between pre-test and post-test scores were examined using paired sample T-tests to determine whether the observed changes were statistically significant. This analysis allows us to evaluate the effectiveness of the intervention across multiple dimensions and assess whether it contributed to reducing delays in implementation.
DOI: 10.6084/m9.figshare.7127795.v1
title: data_preprocessed

description: This is the Wakeman and Henson data preprocessed using the Oostenveld script.<br>
DOI: 10.6084/m9.figshare.9113189.v1
title: Human Thermography Data Points

description: A thermal camera (FLIR E8) was used to measure skin surface temperature at the sternal notch and at 44 predetermined locations on the limbs of 18 human participants. Body locations of high, middle and low Buruli ulcer incidence were identified from existing density maps of lesion distribution. Skin temperature of the three incidence location groups were compared, and differences in age and sex groups were also analysed. All temperatures are in degrees celsius. There are 3 indirect identifiers and no direct identifiers of human participants. This study was approved by the Austin Health Human Research Ethics Committee. Reference number: HREC/17/Austin/578. Written consent was obtained from each participant. <br>
DOI: 10.17632/jhpj54ycmt
title: Mendeley Supplemental Document 1

description: Supplemental document data for Materials&Methods section for Manuscript_JAAD_D-19-02197_Tsuboi_RS_0124 The document is for the benefit of the reviewers only.
DOI: 10.6084/m9.figshare.23622714.v1
title: TikTok items

description: Items
DOI: 10.6084/m9.figshare.27721089.v1
title: Supplementary materials

description: Supplementary materials (includes Supplementary Table 1)
DOI: 10.6084/m9.figshare.6027314.v1
title: Phylogenetic distribution of shell colour in Bivalvia (Mollusca)

description: <b>Supplementary Material for Grant & Williams (2018) "Phylogenetic distribution of shell colour in Bivalvia (Mollusca)" </b> <br><b>Colour photographs taken of museum specimens (NHM London) to illustrate colour characters of 81 bivalve clades. The numbering of clades here corresponds to the clade order in Figure 3. </b>
DOI: 10.6084/m9.figshare.6822707.v1
title: research_database_leiva-dueñasetal2018.xlsx

description: Database used in Leiva-Dueñas et al. (2018). <i>Posidonia oceanica </i>is a marine phanerogam that buries a significant part of its belowground production forming an organic bioconstruction known as mat. Despite <i>Posidonia </i>seagrass mats have proven to be reliable archives of long-term environmental change, palaeoecological studies using seagrass archives are still scarce. Here we reconstruct four millennia of environmental dynamics in the NE coast of Spain by analysing the carbon and nitrogen elemental and stable isotopic composition of <i>P. oceanica </i>sheaths, the proportion of different seagrass organs, the carbonates and organic matter content as well as the grain-size distribution throughout the seagrass mat.<br>
DOI: 10.6084/m9.figshare.29098787.v1
title: Fast disintegrating pellets: Formulation and evaluation

description: <b>Abstract:</b>Background: Extrusion-spheronization is the most commonly used technology to produce pellets using microcrystalline cellulose as a pelletizing agent. However, it has the major drawbacks of lack of disintegration and prolonged drug release. This study aimed to develop rapidly disintegrating microcrystalline cellulose-based pellets.Methods: Several pellet formulations were prepared via extrusion spheronization using a combination of microcrystalline cellulose, mannitol, polyethylene glycol 400, polyplasdone, and croscarmellose sodium. Subsequently, they were evaluated for their physical characteristics.Results: Process optimization indicated that 500 RPM is the ideal extrusion speed. Furthermore, the best spheronization speed was to start with a speed of 3000 RPM speed to cut off the extrudate at a shorter length and then lower the speed to 1000 RPM to reduce fine production and allow for spherical pellet formation. Increasing the polyethylene glycol (PEG[P1] ) content to 20%[P2] and maintaining the percentages of croscarmellose sodium (CCS)[P3] (15%), 15%), and polyplasdone xl (PPXL)[P4] (5%), respectively, demonstrated a significant improvement in disintegration time.Conclusions: MCC-based pellets with fast-disintegrating characteristics were obtained by extrusion and spheronization. Incorporating the soluble filler mannitol, hydrophilic polymer PEG 400 with super-disintegrant CCS, and PPXL 400 resulted in a more porous matrix that facilitated water entry and rapid swelling of the pellets to explode and disintegrate quickly (2 min).<b>Conventions: </b>Abbreviations are usually defined at the first use in the abstract. Check whether 'PEG' should be defined here.<b>Consistency: </b>The usage of a space before the "%" symbol is inconsistent.<br>No space [63 times]<br>Single space [2 times]<br>Please pick one style and apply it consistently throughout the text.<b>Conventions: </b>Abbreviations are usually defined at the first use in the abstract. Check whether 'CCS' should be defined here.<b>Conventions: </b>Abbreviations are usually defined at the first use in the abstract. Check whether 'PPXL' should be defined here.
DOI: 10.6084/m9.figshare.3513545.v1
title: Appendix C. Description of the reduction of error and product means tests.

description: Description of the reduction of error and product means tests.
DOI: 10.6084/m9.figshare.928138.v1
title: Gaussian Job Archive for C6H13NO4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.16573067.v1
title: Supplementary Material for: Einfluss einer achtsamkeitsbasierten Depressionsbehandlung in einer Tagesklinik auf arbeitsbezogene Bewältigungsmuster bei depressiven Patientinnen und Patienten mit berufsbezogenen Konflikten

description: <b><i>Hintergrund:</i></b> Ziel der Studie war es, den Einfluss einer achtsamkeitsbasierten Depressionsbehandlung in einer Tagesklinik auf arbeitsbezogene Bewältigungsmuster bei Patientinnen und Patienten mit einer akuten depressiven Episode und berufsbezogenen Konflikten zu untersuchen. <b><i>Methode:</i></b> In einer Pilotstudie wurden 81 Patientinnen und Patienten mit einer mittelgradigen oder schweren depressiven Episode und berufsbezogenen Konflikten entweder einer tagesklinischen achtsamkeitsbasierten Depressionsbehandlung (mit psychopharmakologischer Medikation bei Bedarf, <i>N</i> = 47) oder einer Kontrollbedingung mit psychopharmakologischer Beratung (<i>N</i> = 34) zugeordnet. Arbeitsbezogene Bewältigungsstile und -muster wurden mit dem Fragebogen für arbeitsbezogenes Erlebens- und Verhaltensmuster (AVEM) zu drei Messzeitpunkten (Beginn, Ende und 8-Monats-Katamnese) untersucht, um gesundheitsgefährdende Risikomuster zu untersuchen. Zudem wurde die psychopathologische Symptombelastung anhand des Beck-Depressions-Inventars (BDI-II) und des Brief-Symptom-Inventory (BSI) gemessen. <b><i>Ergebnisse:</i></b> Die achtsamkeitsbasierte Depressionsbehandlung reduzierte die psychopathologische Symptombelastung signifikant und bewirkte eine positive Veränderung umschriebener gesundheitsgefährdender arbeitsbezogener Bewältigungsstile und Risikomuster hin zu gesundheitsförderlichen Bewältigungsstilen. <b><i>Diskussion:</i></b> Wenngleich Risikomuster durch die achtsamkeitsbasierte Depressionsbehandlung nur zum Teil abgebaut werden konnten, sind die Ergebnisse vielversprechend in Bezug auf gesundheitsförderliche Veränderungen einzelner arbeitsbezogener Bewältigungsstile wie “Verausgabungsbereitschaft”, “Perfektionsstreben”, “Distanzierungsfähigkeit” und “Innere Ruhe/Ausgeglichenheit”. <b><i>Schlussfolgerung:</i></b> Die psychiatrische Versorgung von Patientinnen und Patienten mit einer Depression sollte arbeitsbedingte Stressfaktoren und Konflikte und deren Bewältigung berücksichtigen. Das Behandlungskonzept schließt eine Lücke in der psychiatrischen Versorgung.
DOI: 10.6084/m9.figshare.26240213.v1
title: Data Double Pendulum Swinging Out of Phase

description: This data set show the cartesian positions of the two pivots of a double pendulum swinging in the mode where the two blocks are pi radians out of phase.
DOI: 10.6084/m9.figshare.26298793.v4
title: Coexistence of tropical forest tree species along the demographic buffering spectrum

description: Organisms have evolved diverse adaptive strategies to cope with environmental fluctuations. Slow-growing long-lived species tend to exhibit low temporal variability in population fitness (strongly buffered demographically), whereas fast-growing short-lived species optimize fitness in favorable years (weakly buffered). These patterns set up the expectation that demographic differentiation may reduce differences in long-term fitness among species and promote coexistence in variable environments. Yet, this expectation has never been empirically tested for trees. Here, we quantified fitness inequalities among 204 co-occurring tropical trees spanning a life-history spectrum from strongly to weakly buffered. We found predictable variation in long-term population fitness for species at low densities (λ<sub>s_inv</sub>), pointing to demographic differentiation as a key for coexistence in fluctuating environments. Simulated increases in temperature, precipitation, and drought variability led to divergent impacts on species' fitness and increased fitness differences. Together, these findings provide a novel perspective on mechanisms underpinning the astounding diversity of tropical forests.
DOI: 10.6084/m9.figshare.28742678.v1
title: Data availability: Grandi et.al, Soft Matter revised

description: The number of free surfaces in a polymer ultra-thin film has a strong influence on its physical and mechanical properties. In this study, Young’s modulus as well as the glass transition temperature of multinanolayer coextruded polymer films, hence with no free surfaces, have been measured. We observe that contrary to the case of free-standing or supported ultra-thin films, there is no depression of the glass transition temperature or the Young modulus, but an increase for the latter as the layer thickness decreases, whatever the polymer pair (with various compatibilities). It is proposed that this increase is associated with the rise of interphase volume fraction in the films. An interphase modulus of about 25 GPa can be extracted from the empirical model, about 10 times higher than the typical modulus value of a glassy polymer. This value does not appear to depend on the nature of the polymers, meaning that the presence of entanglements at the interfaces is not a key factor to explain the increase in Young’s modulus of multinanolayer films.
DOI: 10.6084/m9.figshare.29061470.v1
title: <b>Bayesian Network Modeling of Flood Cascade Dynamics and Climate-induced Risks in the Pearl River Delta Urban Agglomeration</b>

description: Climate change and rapid urbanization are intensifying flood vulnerability in highly urbanized delta regions. This study develops a Bayesian network model to assess the vulnerability and cascading failure dynamics of flood control infrastructure in the Pearl River Delta (PRD) urban agglomeration under future climatic scenarios. By integrating multi-source hydrological data, network topology, and conditional probability inference, the model quantifies systemic flood susceptibility and identifies critical failure nodes within the regional flood network. To evaluate future flood hazards, downscaled climate projections from global climate models (GCMs) and a stochastic weather generator (WeaGETS) were employed to simulate extreme precipitation patterns. Results indicate that in certain areas of the PRD, 100-year return period design rainstorm values may increase by up to 100% by the 2050s, particularly under high-emission scenarios. Spatial analysis reveals that the central and southeastern PRD (including Guangzhou, Shenzhen, and Dongguan) are most susceptible to cascading flood failures due to dense hydrological interconnectivity and topographic constraints. These findings underscore the urgent need for climate-adaptive infrastructure planning, enhanced early-warning systems, and integrated watershed management. By bridging hydrological modeling, climate impact assessment, and network-based vulnerability analysis, this study offers a systematic, data-driven framework to support resilient urban flood governance in deltaic megacities facing compounding environmental risks.