cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20347860.v3
title: Molecular characterization and complete genome analysis of highly pathogenic avian influenza virus H5N1 isolated from live bird markets of East Java Indonesia

description: <strong>Background</strong> The highly pathogenic H5N1 avian influenza virus continues to be dangerous to both animal and human health because it can infect a wide range of animals. H5N1 virus comes in a variety of genotypes, but only a small number of them are known to infect mammals. The molecular characterization of viral subtypes in animal populations is indispensable for comprehending the distribution of different viral subtypes in a variety of hosts. <strong>Materials and Methods</strong> The influenza isolate was obtained from a tracheal sample of healthy poultry from live bird markets of East Java Province from March 2021 to April 2022. HA and HI were used for screening and qRT-PCR were used for amplification. Sequencing was done and a genomic sequence was obtained from the GISAID database. MEGA-11 software was used to understand the transformations in the isolate. <strong>Results</strong> A/chicken/East Java/Av1955/2022 contain multiple basic amino acids (PQRE RRRKR /GLF) at the cleavage site in the HA gene that showed the characteristics of HPAIV. All the segments (PB2, PB1, PA, HA, NP, NA, NP, and M) of the study isolate revealed mutations in nucleotides and amino acid sequence and depicted a phylogenetically close relationship to isolates of A/ turkey/East Java/Av154, Malaysia, Thailand, and Japan. Study isolate showed reassortment from the reference virus in all gene segments which was the indication of newly emerging strains of H5N1 in the study area. <strong>Conclusion</strong> The findings of the current study depicted that the mutations in nucleotides and amino acid sequence might be the cause of newly emerging subtypes in the study area. These mutations could potentially make the virus more pathogenic in chickens and ducks.
DOI: 10.6084/m9.figshare.21382371.v1
title: Spatial scales and urban greenspace types influence public conservation preferences

description: The dataset used in the analyses to support the conclusions.
DOI: 10.6084/m9.figshare.24904638.v1
title: Interacting disturbances in savannas

description: Data and code supporting the results of manuscript entitled: "Disentangling disturbances in drylands: Interactions among herbivory, drought, and termite activity in savanna plant communities"
DOI: 10.6084/m9.figshare.6462341.v1
title: Crowd annotations of visual features for 100 images from the ISIC 2017 lesion classification challenge

description: This dataset consists of additional images for 100 images from the ISIC 2017 challenge training data. <br>We collected the annotations during a first year undergraduate project course on medical image analysis (course code 8QA01) at the Department of Biomedical Engineering, Eindhoven University of Technology. In groups of five or six, the students learnt to automatically measure image features, such as "asymmetry", in images of skin lesions from the ISIC 2017 challenge.<br>Each group was encouraged to decide which features they wanted to measure, invent their own way of grading the images, and assess each feature visually by at least three people. The students were not blinded to the melanoma/non-melanoma labels in the data, since the data is openly available online. <br><br>The shared file contains the annotations of group 7. They annotated 5 types of visual features by 6 annotators each. For example, the column Asymmetry_7_1 is the assessment of Asymmetry by the 1st annotator, and so forth.<br>The file also contains several variables from the ISIC challenge: ID of image, melanoma and keratosis labels, and sex and age of the patient, if available.
DOI: 10.6084/m9.figshare.24645747.v1
title: Riverine Nitrogen Data in the Conterminous United States

description: Spatial riverine nitrogen yields derived from gauge observations and river network across the Conterminous United States, including total nitrogen, nitrate, ammonium, and total organic nitrogen.The dataset contains <i>(1) total nitrogen loads for over 1,700 hydrologic stations across the Conterminous United States (CONUS), (2) riverine nitrogen net gain or net loss for watersheds controlled between upstream-downstream hydrologic stations over the CONUS, and (3) </i><i>Nonpoint-Source watershed total nitrogen yield</i><i>.</i>
DOI: 10.6084/m9.figshare.21526485.v1
title: The variant data of C. paliurus populations

description: To explore the population structure and evolutionary history of <em>C. paliurus</em> population, More than 10× coverage of per sample for 35 tetraploid and 10 diploid <em>C. paliurus</em> growing in nine locations were generated from 150-bp Illumina short reads, respectively.
DOI: 10.6084/m9.figshare.12743942.v1
title: Table S1

description: Table including metadata of Klebsiella pneumonia
DOI: 10.6084/m9.figshare.18131150.v1
title: Open Corequisite Writing Textbook_Transcripts from Data Collection Sessions

description: Open Corequisite Writing Textbook_Transcripts from Data Collection Sessions
DOI: 10.6084/m9.figshare.20005071.v1
title: Differences in cognitive aspects between seniors physical exercises practicing and non practising

description: Objective To compare de cognitive development of the seniors that practice and the one that doesn’t practice physical exercises. Methods This transversal study was made with 104 senior citizens, 64 belonging to the physical exercises Practicing Group (G1) and 40 belonging to the Non Practicing Group (G2), registered on Health Centers. It was a applied a Mini Exam of Mental Health (MEEM) to assess the cognitive health and a record for the characterize the sample. Afterwards, it was applied a Battery of Cognitive Computerized Evaluation (CogState) to assess the cognitive development of the senior citizens. There was utilized the U Mann Whitney test to compare the groups and the computation of the measure of effect d of Cohen, to verify if the practice of physical exercise influence on the cognitive development. To the descriptive assessment there was utilized data expressed in average, standard deviation, median and percentage. There was accepted the level of significance of 5%. Results The score on the MEEM have presented statistically significant differences between the groups. About the cognitive development, mensured by CogState, the groups diverged significantly to all the analyzed variables, presenting the G1 the best performance on the time tests of time and simple reaction, of choice and assisted attention; on the other hand, the G2 had better performance on the tests of short time memory and work. Conclusions Senior citizens practicing physical exercises have better performance for simple reaction time, choice reaction time and assisted care, when compared to older non-practicing.
DOI: 10.25413/sun.24325055.v1
title: Ship motion measurements on the SA Agulhas II - Spring Cruise 2019

description: Ship motion measured by accelerometers in a specific array that enables the computation of z-oriented acceleration at points of interest on board beyond the array measurement locations. Acceleration measurements in the dataset are stored in 5-minute batches with a 10 Hz sample rate at the locations and orientations detailed in the associated readme file in the data collection. This dataset is a down-sampled subset of acceleration measurements sampled at 2048 Hz during the SCALE Spring Cruise of 2019.
DOI: 10.6084/m9.figshare.21256005.v1
title: Tabular file of essential variables

description: This tabular file is provided so that skeptical reviewers can apply correlations (filterable by year and region) between juvemort (deaths aged 0-24 in proportion to concurrent deaths) and CBR (crude birth rate). Compare such correlations to those between CBR and other variables such as under-5 child mortality, GDP per capita, and years of schooling. The CSV file is compatible with any statistical program including Excel. Variables include: UN: United Nations identifier for a country or area Name ISO: Alpha-3 identifier for country or area Year Region Juvemort: mortality of those aged 0-24 in proportion to total deaths within the year CBR: Crude birth rate per 1,000 population TFR: Total fertility rate, the projected number of children per woman Mort0to4perthou: Under-5 mortality of children per 1,000 live births GDPpc: log(gross domestic product per capita) * 100 Survivors: Number of survivors remaining at age 25 per 100,000 live births of the cohort Urbaniz: UN-defined urbanization YrsSchool: Years of schooling per adult Home folder of project: https://figshare.com/projects/A_single_life-history_variable_predicts_birth_rate/149708
DOI: 10.6084/m9.figshare.28607690.v1
title: My Data base.xlsx

description: This file corresponding to my data base related to manuscript entitle:Floral traits influencing <i>Anacardium occidentale</i> (Anacardeacae) attractiveness to bees: benefits for cashew reproductive success and bees’ conservation in Côte d’Ivoire
DOI: 10.6084/m9.figshare.28765652.v1
title: Dataset RT-qPCR

description: <b>The enclosed data includes RT-qPCR data</b>We employed CRISPR activation of the gene TSG-6 in MSCs to evaluate the impact of elevated TSG-6 on EV cargo and immunomodulatory function in an in vitro macrophage model. CRISPR-mediated gene activation was confirmed by RT-qPCR.Macrophages were co-treated with LPS and TSG-6-overexpressing MSC-EVs, and gene expression of pro-inflammatory cytokines was measured by RT-qPCR.
DOI: 10.25381/cput.27283761.v1
title: Energy management for a hybrid renewable micro-grid system

description: Hybrid micro-grid systems are a key factor in the shift to sustainable energy sources, resiliency, and efficient power infrastructure, ensuring a cleaner, more dependable energy supply in the future. The new method of micro-grids, however, focusses on the EMS. In this regard, diverse research has been conducted in accordance with EMS, and it has been discovered that EMS of micro-grids presents several obstacles. The effectiveness and operation of an EMS are rarely used in the current literature, or the precision of an EMS is insufficient. For instance, the correlation between the operating conditions of the battery energy storage systems (BESSs) and their rates of charging and discharging, has an impact on the efficiency dependence of the equipment on the operating point, state of charge, system degradation, and imbalance situations. Hence, an EMS is important to offer an optimal hybrid renewable micro-grid operation and optimize its performance.The aim of this research was to optimize the utilization of renewable energy sources while ensuring stability, reliability, and efficiency of the hybrid micro-grid operation. By implementing a sophisticated control algorithm, the aim was to seamlessly integrate various renewable energy sources (RESs), such as solar and wind, with a battery energy storage system and diesel generator. The primary goal was to minimize reliance on fossil fuels, reduce carbon emissions, and promote sustainability by maximizing the utilization of clean energy resources within the hybrid micro-grid. This research offers several significant contributions such as developing an EMS controller that optimizes energy usage within the hybrid micro-grid, ensuring that energy is produced and consumed efficiently. The tools used to develop the energy management strategy comprise MATLAB/Simulink and Typhoon HIL’s real-time digital simulator. The proposed energy management strategy is based on Stateflow logical programming environment.By coordinating the operation of renewable energy sources, energy storage systems, and demand-side management strategies, the controller minimizes energy wastage and improves overall system efficiency. Additionally, this research implements comprehensive control in real-time and management systems to adaptively respond to variation in renewable energy generation and load demands. By addressing these aspects, the research aims to promote wider adoption of sustainable energy practices by offering useful guidance for the design and hybrid micro-grid systems operation. The outcome of this research adds value to existing available academic literature in the quest to plan programs and projects that lead to accelerate the adoption and use of hybrid renewable energy sources for sustainable development and effective sources of power production.
DOI: 10.6084/m9.figshare.14287894.v1
title: THE USE OF PORTFOLIO MANAGEMENT FOR STRATEGIC ALIGNMENT - A SURVEY WITH BRAZILIAN COMPANIES

description: ABSTRACT The number of organizations that use the Project Portfolio Management - PPM has increased considerably worldwide, as it provides an approach to the coordinated management of the components portfolio, aiming to achieve the strategies of organizations. The objective of this work was, thru a quantitative research, presents Brazilian organizations use of PPM as a mechanism to promote alignment with the strategic management. The results obtained in this research were compared with the data results obtained in PMSurvey.org´s 2012 research. A survey submited for 56 brazilian public and private companies was used for this study to identify project´s portfolio alignment with strategic goals and objectives.
DOI: 10.6084/m9.figshare.21835533.v1
title: Decoding Deep Learning applications for diagnosis and treatment planning

description: ABSTRACT Introduction: Artificial Intelligence (AI), Machine Learning and Deep Learning are playing an increasingly significant role in the medical field in the 21st century. These recent technologies are based on the concept of creating machines that have the potential to function as a human brain. It necessitates the gathering of large quantity of data to be processed. Once processed with AI machines, these data have the potential to streamline and improve the capabilities of the medical field in diagnosis and treatment planning, as well as in the prediction and recognition of diseases. These concepts are new to Orthodontics and are currently limited to image processing and pattern recognition. Objective: This article exposes and describes the different methods by which orthodontics may benefit from a more widespread adoption of these technologies.
DOI: 10.6084/m9.figshare.22093463.v1
title: Supplementary Material for: Methodology and baseline data of a comparative exploratory double-blinded randomized study of intravenous iron on fibroblast growth factor 23 and phosphate in chronic kidney disease

description: Modern intravenous iron compounds (e.g., ferric carboxymaltose (FCM) and ferric derisomaltose (FDI)) are utilized in the treatment of iron deficiency anemia in non-dialysis dependent chronic kidney disease (ND-CKD). Product-specific alterations in the metabolism of fibroblast growth factor 23 (FGF-23) leading to hypophosphatemia have been described for certain intravenous iron compounds, such as FCM, with potential effects on bone and cardiovascular health and quality of life. No prior head-to-head comparison between FCM and FDI exists in ND-CKD. This single-center exploratory double-blinded randomized controlled trial primarily aimed to investigate the differential impact of FCM and FDI on FGF-23 and phosphate in patients with iron deficiency +/- anemia and ND-CKD (stages 3a-5 – serum ferritin &lt; 200 μg/L or serum ferritin 200-299 μg/L and transferrin saturation &lt; 20%). Patients were randomized (1:1) to receive either FCM or FDI over two infusions (one-month apart). Follow-up was three months. Measurements of serum intact FGF-23, phosphate, vitamin D metabolites, parathyroid hormone other bone metabolism, cardiovascular and quality of life markers were monitored. 168 patients were pre-screened. Thirty-five patients were screened; 26 patients were randomized. The mean (standard deviation) age was 67.9 (12.4) and 17 participants were male. Most participants had stage 4 CKD (median (interquartile range) eGFR: 18.0 (11.3) ml/min/1.73 m2). A higher than normal median (interquartile range) level of intact FGF-23 (212.1 (116.4) pg/ml) was noted. Serum phosphate was within normal range, while parathyroid hormone was higher and 1,25 (OH)2 vitamin D lower than the normal range. The “Iron and Phosphaturia – ExplorIRON-CKD” trial will provide important information regarding the differential effect of intravenous iron products in terms of FGF-23, phosphate and other markers of bone and cardiovascular metabolism, alongside patient reported outcome measures in patients with ND-CKD.
DOI: 10.17028/rd.lboro.28911560
title: Supplementary information files for "Autoclaved aerated concrete in reinforced building applications: A systematic review of AAC/RAAC in the last 40+ years"

description: Supplementary files for article "Autoclaved aerated concrete in reinforced building applications: A systematic review of AAC/RAAC in the last 40+ years"<br><br>UK industry has recently highlighted concerns relating to the structural safety of Reinforced Autoclaved Aerated Concrete (RAAC) in existing structures, together with a small number of collapses without warning. A broad body of scholarly academic research already exists on AAC in Building Structures, though much less on RAAC. Against the fact that extant research is primarily industry-led, there is a lack of a systematic critical review of the body of academic literature available. To achieve this, the paper systematically reviews 92 academic papers filtered from over 480 published studies on AAC/RAAC, each included after applying an exclusion criterion, from 1980 to 2024. The review identifies four drivers for AAC applications in building structures, namely AAC being: 1) a lightweight material, useful in reducing load transfers, 2) an insulating material, against fire, temperature, and sounds, 3) a sustainable material, of a recyclable nature with relatively low carbon emissions, and 4) an economical material because of its composition and ease of use and application. Moreover, it also identifies the popular areas of AAC application within buildings, the processes involved in its production, the material's behaviour and characteristics, the types of reinforcement, and the modes of AAC failure. Such a review of knowledge from the last 40 years will help scholars identify the understudied research gaps and several untapped research areas that are included in the proposed research agenda.<br><br>© The Author(s), CC BY-4.0
DOI: 10.17028/rd.lboro.28911560.v1
title: Supplementary information files for "Autoclaved aerated concrete in reinforced building applications: A systematic review of AAC/RAAC in the last 40+ years"

description: Supplementary files for article "Autoclaved aerated concrete in reinforced building applications: A systematic review of AAC/RAAC in the last 40+ years"<br><br>UK industry has recently highlighted concerns relating to the structural safety of Reinforced Autoclaved Aerated Concrete (RAAC) in existing structures, together with a small number of collapses without warning. A broad body of scholarly academic research already exists on AAC in Building Structures, though much less on RAAC. Against the fact that extant research is primarily industry-led, there is a lack of a systematic critical review of the body of academic literature available. To achieve this, the paper systematically reviews 92 academic papers filtered from over 480 published studies on AAC/RAAC, each included after applying an exclusion criterion, from 1980 to 2024. The review identifies four drivers for AAC applications in building structures, namely AAC being: 1) a lightweight material, useful in reducing load transfers, 2) an insulating material, against fire, temperature, and sounds, 3) a sustainable material, of a recyclable nature with relatively low carbon emissions, and 4) an economical material because of its composition and ease of use and application. Moreover, it also identifies the popular areas of AAC application within buildings, the processes involved in its production, the material's behaviour and characteristics, the types of reinforcement, and the modes of AAC failure. Such a review of knowledge from the last 40 years will help scholars identify the understudied research gaps and several untapped research areas that are included in the proposed research agenda.<br><br>© The Author(s), CC BY-4.0
DOI: 10.6084/m9.figshare.28785320.v1
title: Analysis of Cobalamin metabolism genes in MAGs from Ocean metagenomes (Soto et al., 2022)

description: Soto et al. analyzed 54 Metagenomes from sea water samples collected off various stations in the Scotian Shelf ans Slope in the Northwest Atlantic Ocean. The stations covered two spatially distinct regions, viz. Coastal (near the coast of Nova Scotia) and open Ocean. The main aim of the study was to characterize the cobalamin sources and sinks as a first step in understanding the overall cobalamin dynamics and its impact on productivity.For visualization with JarrVis the top 15 most complete and least redundant MAGs from each group, i.e Cobalamin consumers, producers and remodellers, were selected. Here we used JarrVis to visualize the taxonomic diversity of these three groups of organisms and their relative contributions to the genes involved in the Cobalamin biosysthesis, consumption and remodelling pathways.
DOI: 10.6084/m9.figshare.24260461.v1
title: Data and code used in the research of the paper

description: Data and code used in the research of the paper.
DOI: 10.6084/m9.figshare.25670445.v1
title: Shear capacity of reinforced UHPC beams

description: Shear capacity of reinforced UHPC beams
DOI: 10.6084/m9.figshare.28828304.v1
title: The Havoc Paradox in Generator-Based Fuzzing --- RCR Raw Data

description: RAW data collected in evaluating: The Havoc Paradox in Generator-Based Fuzzing
DOI: 10.6084/m9.figshare.16428972.v1
title: Supplementary Material for: Job Satisfaction and Intentions to Leave of Foreign-National Urologists Working at German Hospitals: Results of the Cross-Sectional EUTAKD Study

description: <b><i>Background:</i></b> Studies exist that identify factors associated with higher professional satisfaction among clinicians. However, there are no reliable findings for clinicians with a migration background as to whether there is a correlation between particular dimensions of professional satisfaction and the desire to leave their current specialty or country of employment. For the first time, these data were collected within a questionnaire-based study from urological clinicians with a migration background (UCMBs) working in Germany. <b><i>Material and Methods:</i></b> A SurveyMonkey<sup>®</sup> with 101 items relating to characterizing features of the study participants and questions about job satisfaction (<i>n</i> = 39) was opened for UCMBs between August and October 2020. The influence of different dimensions of job satisfaction on the desire to quit the urological specialty/leave Germany was analyzed (group A: neither want to leave urology nor Germany; group B: can at least imagine leaving the urological profession and/or Germany). <b><i>Results:</i></b> Eighty-one UCMBs were distributed almost equally in groups A (50.6%) and B (49.4%). Occupational satisfaction was higher in several respects in group A. Three dimensions that differed significantly with regard to occupational satisfaction were used to create an aggregate score ranging from 3 to 15 points as follows: (1) relationship to superiors (<i>p</i> = 0.014), (2) career opportunities in the clinic (<i>p</i> &lt; 0.001), and (3) opportunities for the further development of surgical skills (<i>p</i> = 0.006). For each point value of this aggregate score, the UCMB’s desire to quit urology or leave Germany (or at least uncertainty about this question) decreased by a relative value of 34.6% (odds ratio: 0.654, 95% confidence interval: 0.496–0.861, <i>p</i> = 0.002). <b><i>Conclusions:</i></b> Various dimensions of job satisfaction have been identified, the improvement of which could contribute to the long-term retention of UCMBs at German urological clinics.