cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9944390.v1
title: Supplementary Material for: Stereotactic Radiosurgery for Pediatric and Adult Intracranial and Spinal Ependymomas

description: <b><i>Objective/Background:</i></b> We report efficacy and toxicity outcomes with stereotactic radiosurgery (SRS) for intracranial and spinal ependymoma. <b><i>Methods:</i></b> We analyzed adult and pediatric patients with newly diagnosed or recurrent intracranial or spinal ependymoma lesions treated with SRS at our institution. Following SRS, local failure (LF) was defined as failure within or adjacent to the SRS target volume, while distant failure (DF) was defined as failure outside of the SRS target volume. Time to LF and DF was analyzed using competing risk analysis with death as a competing risk.<i></i>Overall survival (OS) was calculated from the date of first SRS to the date of death or censored at the date of last follow-up using the Kaplan-Meier method. <b><i>Results:</i></b> Twenty-one patients underwent SRS to 40 intracranial (<i>n</i> = 30) or spinal (<i>n</i> = 10) ependymoma lesions between 2007 and 2018, most commonly with 18 or 20 Gy in 1 fraction. Median follow-up for all patients after first SRS treatment was 54 months (range 2–157). The 1-year, 2-year, and 5-year rates of survival among patients with initial intracranial ependymoma were 86, 74, and 52%, respectively. The 2-year cumulative incidences of LF and DF after SRS among intracranial ependymoma patients were 25% (95% CI 11–43) and 42% (95% CI 22–60), respectively. No spinal ependymoma patient experienced LF, DF, or death within 2 years of SRS. Three patients had adverse radiation effects. <b><i>Conclusions:</i></b> SRS is a viable treatment option for intracranial and spinal ependymoma with excellent local control and acceptable toxicity.
DOI: 10.7274/28756670.v1
title: "Fire is Hot, and Women Give Birth": Martin Luther and Philip Melanchthon on Women, Gender, and Sex

description: This dissertation investigates the relationships Martin Luther (1483–1546) and Philip Melanchthon (1497–1560) had with women and the way that these relationships influenced their theology; it also provides a historical comparison of their respective theological anthropologies with respect to gender. The comparison between Luther and Melanchthon exploits the differences in their respective temperaments, backgrounds, and interests. This dissertation considers the whole Luther, from the beginning to the end of his career, and the whole Melanchthon. It argues that both Luther and Melanchthon espoused views about women and gender that are riddled with ambiguity and paradox. It offers various explanations for this tension, including the Bible itself, their pluralistic medieval inheritance, and the distinctiveness of Lutheran theology. Furthermore, it argues that their respective theologies cannot be divorced from their construction of gender ideology. In particular, the concepts of theologia crucis and libertas christiana often led them to break from tradition, or to side with one strand of tradition over another.
DOI: 10.17632/9m7jhd3zdh
title: Childbirth Experience

description: Childbirth Experience data_SPSS_21
DOI: 10.17632/bbgsysd8k7
title: Supplymetary material to ”Application of MinION-Based Long-Read Sequencing with One-Step PCR for the Genetic Diagnosis of 21-Hydroxylase Deficiency”

description: supplymetary material to ”Application of MinION-Based Long-Read Sequencing with One-Step PCR for the Genetic Diagnosis of 21-Hydroxylase Deficiency”
DOI: 10.17632/ty8cz5crmt
title: Supplemental material for Nomogram for predicting intraoperative hemodynamic instability in patients with normotensive pheochromocytoma.

description: Supplemental material for Nomogram for predicting intraoperative hemodynamic instability in patients with normotensive pheochromocytoma.
DOI: 10.6084/m9.figshare.25634586.v1
title: CAV'24 Artifacts paper4986

description: We propose StarFuzz, that allows F* ineractive theorem prover to provide better end-to-end assurance on the application— even when interfaced with the closed-box components. Verified code extracted from F* interface with external libraries containing real-life complexities—proprietary library calls, remote/cloud APIs, complex models like ML models, inline assembly, highly non-linear arithmetic, vector instructions etc. We refer to such functions/operations as closed-box components. These closed-box components are handled with the user assuming relevant lemmas about them. However, these assumed lemmas may be inconsistent due to (i) incorrect assumed specification and (ii) faulty implementation of closed-box components. To validate consistency of specification and implementation of such closed-box components, StarFuzz constructs a relevant verification condition including the closed-box components, and uses Sādhak under the hood to validate it. In our experiment, we have used StarFuzz to validate around 56 F* specifications used in many library calls that are used in F* proofs. In our collected benchmarks from F* repository, StarFuzz discovered four bugs—one bug that revealed an error on the assumed lemmas for a closed-box function, and three bugs in the external implementations of these components.
DOI: 10.6084/m9.figshare.29203634.v1
title: Immunogenicity results for mRNA-LNPs encoding for SARS-CoV-2 spike protein produced on different LNP platforms (dataset).

description: The results are shown as mean absorbance values. ABS is an abbreviation for absorbance, and IgG-RBD refers to immunoglobulin G receptor binding domain.
DOI: 10.6084/m9.figshare.5259643.v2
title: myDAUN dataset - shrubs

description: Database name: myDAUN dataset - shrubs consist of 45 species of tropical shrubs and 30 samples for each species, in total 1350 sample images of tropical shrub species.
DOI: 10.6084/m9.figshare.8187605.v1
title: Genome wide decrease of DNA replication eye density at the midblastula transition of <i>Xenopus laevis</i>

description: During the first rapid divisions of early development in many species, the DNA:cytoplasm ratio increases until the midblastula transition (MBT) when transcription resumes and cell cycles lengthen. S phase is very rapid in early embryos, about 20–30 times faster than in differentiated cells. Using a combination of DNA fiber studies and a <i>Xenopus laevis</i> embryonic <i>in vitro</i> replication system, we show that S phase slows down shortly after the MBT owing to a genome wide decrease of replication eye density. Increasing the dNTP pool did not accelerate S phase or increase replication eye density implying that dNTPs are not rate limiting for DNA replication at the <i>Xenopus</i> MBT. Increasing the ratio of DNA:cytoplasm in egg extracts faithfully recapitulates changes in the spatial replication program in embryos, supporting the hypothesis that titration of soluble limiting factors could explain the observed changes in the DNA replication program at the MBT in <i>Xenopus laevis</i>.
DOI: 10.17632/fkbkf3xgck
title: Optimization of bioethanol production from banana peels

description: Energy plays a vital role in the development of any nation. However, that development increases pollution levels. Recycling and utilization have become major concerns of developing countries. The goal of this research is to utilize banana peels for the production of bioethanol by using the yeast Saccharomyces cerevisiae. The effects of hydrolysis factors were investigated, and the optimized combination of variables with response surface designs was found. The results show that 45.088% of ethanol was obtained at 1.50% v/v acid concentration, 91.02 °C temperature and 21.66 min retention time. Analysis of variance (ANOVA) correlation coefficients Pred R2 = 0.8650 and Adj R2 = 0.9782 indicates an excellent evaluation of the experimental data by a second-order polynomial regression model.
DOI: 10.17632/p45pfscm8n
title: 2015 Jakarta's Health Insurance Claim Data

description: There are four background variables available from the data: • Prov (f1): Provider: 1. Cipto Mangunkusumo general hospital, 2. Dharmais National Cancer Center, 3. Harapan Kita National Heart Center and 4. Harapan Kita Children and Mother hospital. • LofB (f2): Line of Business: 1. PBI (Funded by Government) 2. PPU (Employee obligation) 3. PBPU (Other sources) • MedBen (f3): Type of Medical Benefit: 1. Procedure, 2. Non-procedure, 3. Maternity • Resint (f4): Resource intensity: 1. Low, 2. Medium, 3. High, 4. Outpatient Claim was transformed to log claim and currency was converted to Canadian dollar with currency rate on September 1, 2018.
DOI: 10.6084/m9.figshare.1128657.v4
title: Multiple nuclear genes stabilize the phylogenetic backbone of the genus <i>Quercus</i>

description: Phylogenetic relationships among 108 oak species (genus <i>Quercus</i> L.) were inferred using DNA sequences of six nuclear genes selected from the existing genomic resources of the genus. Previous phylogenetic reconstructions based on traditional molecular markers are inconclusive at the deeper nodes. Overall, weak phylogenetic signals were obtained for each individual gene analysis, but stronger signals were obtained when gene sequences were concatenated. Our data support the recognition of six major intrageneric groups Cyclobalanopsis, Cerris, Ilex, Quercus, Lobatae and Protobalanus. Our analyses provide resolution at deeper nodes but with moderate support and a more robust infrageneric classification within the two major clades, the ‘Old World Oaks’ (Cyclobalanopsis, Cerris, Ilex) and ‘New World Oaks’ (Quercus, Lobatae, Protobalanus). However, depending on outgroup choice, our analysis yielded two alternative placements of the Cyclobalanopsis clade within the genus <i>Quercus</i>. When <i>Castanea</i> Mill. was chosen as outgroup, our data suggested that the genus <i>Quercus</i> comprised two clades corresponding to two subgenera as traditionally recognized by Camus: subgenus <i>Euquercus</i> Hickel and Camus and subgenus <i>Cyclobalanopsis</i> Øersted (Schneider). However, when <i>Notholithocarpus</i> Manos, Cannon and S. Oh was chosen as an outgroup subgenus <i>Cyclobalanopsis</i> clustered with Cerris and Ilex groups to form the Old World clade. To assess the placement of the root, we complemented our dataset with published data of ITS and CRC sequences. Based on the concatenated eight gene sequences, the most likely root position is at the split between the ‘Old World Oaks’ and the ‘New World Oaks’, which is one of the alternative positions suggested by our six gene analysis. Using a dating approach, we inferred an Eocene age for the primary divergences in <i>Quercus</i> and a root age of about 50–55 Ma, which agrees with palaeobotanical evidence. Finally, irrespective of the outgroup choice, our data boost the topology within the New World clade, where (Protobalanus + Quercus) is a sister clade of Lobatae. Inferred divergence ages within this clade and the Cerris–Ilex clade are generally younger than could be expected from the fossil record, indicating that morphological differentiation pre-dates genetic isolation in this clade.
DOI: 10.6084/m9.figshare.16755673.v2
title: SI datasets: Magnetic parameter data (3-0 Ma) from the Tengger Desert, China

description: SI datasets for paper, "Eccentricity forcing of East Asian monsoonal systems over the past 3 million years", by Liu et al., (2021), doi:10.1073/PNAS.2107055118
DOI: 10.6084/m9.figshare.17207462.v1
title: File S12. McNemar's test statistics for 561,683 filtered SNPs, filename: BCHF102PairsHD778FFFSortFiltered.McNemarsResults17.xlsx (450.8 Mb)

description: Bovine congestive heart failure (BCHF) has become increasingly prevalent among feedlot cattle in the Western Great Plains of North America with up to 7% mortality in affected herds. BCHF is an untreatable complex condition involving pulmonary hypertension that culminates in right ventricular failure and death. Genes associated with BCHF in feedlot cattle have not been previously identified. Our aim was to search for genomic regions associated with this disease. A retrospective, matched case-control design with 102 clinical BCHF cases and their unaffected penmates was used in a genome-wide association study. Paired nominal data from approximately 560k filtered single nucleotide polymorphisms (SNPs) were analyzed with McNemar’s test. The most significant genome-wide association was in the arrestin domain-containing 3 protein gene (ARRDC3), followed by the nuclear factor IA gene (NFIA, mid-p-values, 1x10E-8 and 2x10E-7, respectively). Animals with homozygous risk alleles at either gene were approximately 8-fold more likely to have BCHF than their matched penmates without those risk alleles (CI95 = 3-17). Animals with homozygous risk alleles at both genes were 28-fold more likely to have BCHF than all others (p-value = 1x10E-7, CI95 = 4-206). A linked missense variant in ARRDC3 (C182Y) represents a potential functional variant since C182 is conserved among all other jawed vertebrate species observed. A DNA test with two markers showed 29% of 273 BCHF cases had homozygous risk alleles in both genes, compared to 2.5% in 198 similar unaffected feedlot cattle. This DNA test may be useful for identifying feedlot animals with the highest risk for BCHF in the environments described here. Although pathogenic roles for ARRDC3 and NFIA variants associated with BCHF are unknown, their discovery facilitates classifying animals by genetic risk and allows cattle producers to make informed decisions for selective breeding and animal health management.
DOI: 10.6084/m9.figshare.20736520.v1
title: Supplementary Data associated with the paper "cogeqc: an R/Bioconductor package for quality checks in comparative genomics"

description: Overview
This dataset is associated with the paper "cogeqc: an R/Bioconductor package for quality checks in comparaitve genomics". Included files are:
<br>
File description
- <strong>brassicaceae_proteomes.rda: </strong>an R object containing the whole-genome protein sequences of 25 Brassicaceae species. Only translated sequences from primary transcripts were included. Data are represented as a list of AAStringSet objects.
- <strong>Orthogroups_*.tsv: </strong>Orthogroups inferred with OrthoFinder using the sequences in <em>brassicaceae_proteomes.rda</em>. The strings "default" and "ultra" in filenames indicate the DIAMOND sensitivity mode that was used, and numbers (1, 1_5, 2, and 3) indicate the mcl inflation parameter.
DOI: 10.6084/m9.figshare.21896796.v1
title: Internal marketing analysis for improving the internal consumer satisfaction and customer orientation of employees in private-owned sports center

description: With the concept of “healthy lifestyle” deeply rooted in people’s minds, the sport service industry is booming. Competition in the industry is intensifying, which means that the sport service industry must improve its service quality to be competitive. Customer orientation is the key factor for enterprises to gain competitive advantage. With the in-depth understanding of internal marketing in the service industry. Managers have realized that treating employees as internal consumer is a good way to improve their satisfaction and gain customer orientation. However, what internal marketing strategies will have a positive effect on internal consumer satisfaction and customer orientation of private-owned sports center employees are still unclear. In this investigation, a total of 326 employees from the private-owned sports center were used to investigate the effects of internal marketing strategies on internal consumer satisfaction and customer orientation. All employees were asked to complete a questionnaire comprised of a 5-point Likert scale. A path model was used to investigate the direct and indirect effects of hypothetical variables on internal consumer satisfaction and customer orientation. The findings suggested that internal communication, administrative support, and educational training were important factors affecting internal consumer satisfaction and customer orientation. We concluded that the implementation of internal marketing strategies can improve internal consumer satisfaction and customer orientation, and a higher levels of internal consumer satisfaction encourage employees to have higher degrees of customer orientation. Therefore, the implementation of internal marketing strategy was beneficial to the development of private-owned sports center.
DOI: 10.6084/m9.figshare.24562463.v1
title: Optimal Subsampling via Predictive Inference

description: In the big data era, subsampling or sub-data selection techniques are often adopted to extract a fraction of informative individuals from the massive data. Existing subsampling algorithms focus mainly on obtaining a representative subset to achieve the best estimation accuracy under a given class of models. In this article, we consider a semi-supervised setting wherein a small or moderate sized “labeled” data is available in addition to a much larger sized “unlabeled” data. The goal is to sample from the unlabeled data with a given budget to obtain informative individuals that are characterized by their unobserved responses. We propose an optimal subsampling procedure that is able to maximize the diversity of the selected subsample and control the false selection rate (FSR) simultaneously, allowing us to explore reliable information as much as possible. The key ingredients of our method are the use of predictive inference for quantifying the uncertainty of response predictions and a reformulation of the objective into a constrained optimization problem. We show that the proposed method is asymptotically optimal in the sense that the diversity of the subsample converges to its oracle counterpart with FSR control. Numerical simulations and a real-data example validate the superior performance of the proposed strategy. Supplementary materials for this article are available online.
DOI: 10.17632/6tm2d6sz7p
title: Phishing Detection Dataset

description: This dataset consists of 247950 instances, of which 128541 are from phishing URLs and 119409 are from legitimate URLs.   It encompasses 41 features and 1 target variable (0=legitimate,1=phishing), making it suitable for implementing machine learning algorithms to identify phishing attacks.
DOI: 10.17632/pt9mg6twsy
title: IgA Pemphigus: A Systematic Review

description: This dataset consists of details of the literature review that was conducted using Ovid-Medline (1946-present), Embase (1947-present) and Web of Science (1900-present) to identify eligible articles regarding IgA pemphigus. Publications up to July 1, 2019 were searched independently. Reference lists of included articles were further screened for additional eligible publications.
DOI: 10.6084/m9.figshare.21583215.v1
title: Secular trends in body image dissatisfaction

description: This is the dataset of our study, entitled "Secular trends in body image dissatisfaction and associated factors among adolescents (2007–2017/2018)", including the output and syntax files, and also a memo describing the tests we performed. In this dataset, all the variables presented in the study can be found, being possible to reproduct our analyses and results.
DOI: 10.6084/m9.figshare.25632861.v1
title: VF8137 genome sequence and annotation result.

description: Here we provide the genome sequence file and annotated result file of broad bean VF8137.
DOI: 10.6084/m9.figshare.9876299.v2
title: Spanish Validation of Female Condom Attitude Scale and Female Condom Use in Colombian Young Women

description: Spanish Validation of Female Condom Attitude Scale and Female Condom Use in Colombian Young Women
DOI: 10.6084/m9.figshare.14407616.v1
title: NIPS data

description: NIPS results
DOI: 10.17632/px5fkz9pv3
title: Power System Data for Relay Coordination

description: This dataset contains all basic information for Four transmission systems (IEEE-3, IEEE-6, IEEE-8, and IEEE-30 Bus). Those systems are commonly implemented to corroborate relay coordination models and to solve this optimization problem.
DOI: 10.6084/m9.figshare.12763616.v1
title: Interview transcripts of TIME-HF project

description: Interview transcripts of patients, caregivers, nurses and doctors of TIME-HF project.
DOI: 10.6084/m9.figshare.17052410.v2
title: Fingertip Videos for Heart Rate estimation

description: Videos of fingertip were recorded with Redmi Note 8 smartphone camera. Data was collected from 24 participants, both male and female in the age group of5 to 77 years. Each participant’s finger was illuminated withtorch light which was right next to the camera. The cameralens was then completely covered with the fingertip. Video was recorded for 20 seconds. The recording frequency of the camera was 30 frames per second (fps). Simultaneously, the ground truth HR was recorded using the Andesfit Health pulse oximeter. The dataset contained HR readings from 59 to 119 bpm.<br>This dataset can be used to extract the PPG waveform from the videos. The ground truth heart rate recorded in excel file can be used as a reference to validate your estimations.
DOI: 10.6084/m9.figshare.24584826.v1
title: Data for "Characterizing oxidation, thickness, and composition of metallic glass thin films with combined electron probe microanalysis and X-ray photoelectron spectroscopy"

description: Metallic glass thin films (MGTFs) are a recently developed class of alloy coatings with potential applications ranging from biomedical devices to electrical components. Their tribological performance in service conditions is dictated by MGTF bulk composition but can be limited by the native oxide surface that inevitably forms upon exposure to atmosphere. Surface oxidation, thickness, and composition of ZrCuNiAl MGTFs were characterized using a combination of X-ray photoelectron microscopy (XPS) and electron probe microanalysis (EPMA). MGTF samples with nominal thicknesses of 50, 500, and 1500 nm were sputtered onto Si and SiN wafer substrates within high vacuum deposition chamber and their amorphicity was confirmed by X-ray diffraction. XPS depth profiling identified the thin film composition and showed that the surface oxide was dominated by a mixed layer of mostly ZrO<sub>2</sub> and a little oxidized Al. EPMA X-ray intensities were acquired as a function of beam energy to excite characteristic X-rays from different depths of the MGTFs and reconstructed using open-source thin film analysis software <i>BadgerFilm</i>, to determine the composition and thickness of sample layers. EPMA results constrain the composition to be Zr<sub>54</sub>Cu<sub>29</sub>Al<sub>10</sub>N<sub>7</sub> within 0.7 at. % variation and total thicknesses to be 49, 470, and 1546 nm. Using the oxide composition identified from XPS depth profiling as an input for <i>BadgerFilm</i> analysis, EPMA results indicate the surface oxidation layer on each of the thin film samples was 6.5 ± 1.1 nm thick and uniform across a 0.25 mm region of the film.
DOI: 10.6084/m9.figshare.25671951.v1
title: Data and command files.zip

description: Data and command files for "How does green credit guidelines affect environmentally friendly enterprises’ ESG? A quasi-natural experiment from China".
DOI: 10.6084/m9.figshare.4264688.v1
title: Judgment No. 72A/1947 against Colonel Shoichi IKEDA for 15 years’ imprisonment (rendered 30 March 1948)

description: An annotated translation of Judgment No. 72A/1947 of the Batavian War Crimes Tribunal against Colonel Shoichi IKEDA for 15 years’ imprisonment (rendered 30 March 1948). <br>This translation was performed by members of the community as organised by Danny Friedman via the http://koreadutchindiesproject.blogspot.com in 2007, and verified, standardised, and annotated by Nina H. B. Jørgensen, Danny Friedman, and Alainna Therese Wrigley as a part of the Batavian War Crimes Tribunal Project at the Chinese University of Hong Kong Centre for Rights and Justice in 2012-3. <br>These translations are made available to the public for research use and are included with scans of the Dutch original judgment as prepared by the Project.