cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17595924
title: Evaluation of in vitro toxicity of common phytochemicals included in weight loss supplements using 1H NMR spectroscopy

description: Herbal and dietary supplements (HDS) are popular among consumers seeking a “natural” approach for improving their health, however at present there is a lack of evidence to support the claims of efficacy and safety for most of these products. Herbal weight loss supplements (WLS) are a group of HDS that are frequently implicated in cases of toxicity; however, the causative substances often remain unknown due to the complex chemical nature of such supplements. This study aimed to analyse the in vitro safety (in human liver carcinoma (HepG2) cells and colon carcinoma (Caco-2) cells) of 12 active compounds commonly found in WLS, first with safety screening using the MTT cytotoxicity assay, followed by metabolic profiling with 1H NMR spectroscopy. Of the phytochemicals evaluated, epigallocatechin-3,0-gallate (EGCG) was the only compound that caused a significant reduction in viability of both cell lines (25.3% in HepG2 cells and 18.5% in Caco-2 cells), and this decrease was potentiated by CYP450 induction with rifampicin. Subsequent 1H NMR analysis showed changes in key metabolites such as amines, amino acids, carboxylic acids, and glucose that were indicative of protein degradation and disrupted energy and lipid metabolism. Whilst the remaining 11 active compounds analysed did not demonstrate significant toxicity in isolation, these require further assessment to determine their safety when used in combination with other phytochemicals. Given that the majority of WLS contain multiple herbal ingredients, each with a complex chemical composition, it is important to understand the role of interactions in adverse events.
DOI: 10.5281/zenodo.17595925
title: Evaluation of in vitro toxicity of common phytochemicals included in weight loss supplements using 1H NMR spectroscopy

description: Herbal and dietary supplements (HDS) are popular among consumers seeking a “natural” approach for improving their health, however at present there is a lack of evidence to support the claims of efficacy and safety for most of these products. Herbal weight loss supplements (WLS) are a group of HDS that are frequently implicated in cases of toxicity; however, the causative substances often remain unknown due to the complex chemical nature of such supplements. This study aimed to analyse the in vitro safety (in human liver carcinoma (HepG2) cells and colon carcinoma (Caco-2) cells) of 12 active compounds commonly found in WLS, first with safety screening using the MTT cytotoxicity assay, followed by metabolic profiling with 1H NMR spectroscopy. Of the phytochemicals evaluated, epigallocatechin-3,0-gallate (EGCG) was the only compound that caused a significant reduction in viability of both cell lines (25.3% in HepG2 cells and 18.5% in Caco-2 cells), and this decrease was potentiated by CYP450 induction with rifampicin. Subsequent 1H NMR analysis showed changes in key metabolites such as amines, amino acids, carboxylic acids, and glucose that were indicative of protein degradation and disrupted energy and lipid metabolism. Whilst the remaining 11 active compounds analysed did not demonstrate significant toxicity in isolation, these require further assessment to determine their safety when used in combination with other phytochemicals. Given that the majority of WLS contain multiple herbal ingredients, each with a complex chemical composition, it is important to understand the role of interactions in adverse events.
DOI: 10.15468/dl.g3ces4
title: Occurrence Download

description: A dataset containing 223 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Juglans sigillata"
 ]
}

 The dataset includes 223 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030048-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gztkrr
title: Occurrence Download

description: A dataset containing 631 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abies spectabilis"
 ]
}

 The dataset includes 631 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030049-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ywsaew
title: Occurrence Download

description: A dataset containing 839 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hopea odorata"
 ]
}

 The dataset includes 839 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030050-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c472q9
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ambystoma mexicanum",
 "Year 1960-2025"
 ]
}

 The dataset includes 70 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030052-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.src3gn
title: Occurrence Download

description: A dataset containing 323 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dipterocarpus tuberculatus"
 ]
}

 The dataset includes 323 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030051-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17605/osf.io/sjvpn
title: Taylors Creek living shoreline data (2021-2023)

description: This dataset includes drone imagery, RTK-GNSS data, and derived digital elevation models and orthomosaics as well as oyster abundances and lengths, wave heights, and sediment composition data collected at the Rachel Carson Reserve in Beaufort, NC, USA. The sites monitored include 3 OysterCatcherTM reefs and 1 control site with no reef. The drone data was collected to monitor changes of the vegetation and elevation around the reefs and at the control site from 2022 to 2023. Oyster, wave, and sediment data were collected to characterize the sites. The drone data was collected on March 2, 2022 and April 19, 2023. Oyster abundances and lengths were monitored on March 1st, June 30th, September 26th, and November 22nd of 2022 and March 22nd of 2023. Wave heights were monitored during three periods in 2021 (June 22nd-23rd, August 17th-25th, and October 20th-22nd). Sediment samples were collected on September 20th, 2021 and October 27th, 2023. The RTK-GNSS data includes an OPUS file created from a base station file and roving measurements of the ground control points (GCPs) used for the drone survey. More details can be found in README files within the dataset and in the associated publication (Geesin et al. 2025 (in review)).
DOI: 10.17605/osf.io/pkmvs
title: BFCITY Delphi Data Repository
DOI: 10.6084/m9.figshare.30606560
title: <i>Coryphaenoides armatus</i> Genome Annotation

description: genome annotation of the deep-sea species <i>Coryphaenoides armatus</i>
DOI: 10.6084/m9.figshare.30606560.v1
title: <i>Coryphaenoides armatus</i> Genome Annotation

description: genome annotation of the deep-sea species <i>Coryphaenoides armatus</i>
DOI: 10.5281/zenodo.17595958
title: FMT for CID

description: We have both metadata and ASV data here
DOI: 10.5281/zenodo.17595959
title: FMT for CID

description: We have both metadata and ASV data here
DOI: 10.15468/dl.s957fx
title: Occurrence Download

description: A dataset containing 366 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ilex venulosa"
 ]
}

 The dataset includes 366 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030053-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fvc6xj
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Heliaster solaris"
 ]
}

 The dataset includes 18 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030054-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/qo1gsg
title: Paradox of Traditional Leadership in Post-Conflict Reintegration

description: This is a conjoint dataset collected from an experimental survey in northwestern Nigeria. The author surveyed 215 members of IDP hosting communities. The study examines the influence of traditional/local elites in post-conflict reintegration process.
DOI: 10.15468/dl.jwkjjq
title: Occurrence Download

description: A dataset containing 345 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Nymphaea immutabilis"
 ]
}

 The dataset includes 345 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030055-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jk5vf6
title: Occurrence Download

description: A dataset containing 1263 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Picea asperata"
 ]
}

 The dataset includes 1263 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030056-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57783/gv4s-ps89
title: LibreChat-TEST
DOI: 10.25919/vnma-0j64
title: Bushfire fuel classification fuel types map release 1.0

description: This map describes Australian fuel type classes and their estimated extents using the Bushfire Fuel Classification (BFC) framework of Hollis et al. (2015) and Cruz et al. (2018). The BFC is a hierarchical, structure-based classification system for fuel complexes, enabling distinct fuel extents and characterisations to be mapped directly onto fire behaviour models. The map has been generated using nationally consistent, open-source datasets, predominantly derived from remotely sensed data, to quantitatively characterise vegetation life forms, height and foliage cover. The automated production of this map allows for rapid versioning as data inputs are enhanced. This version of the BFC fuel types map integrates multiple spatial and temporal resolution datasets, ranging from 10 to 500 metres. For a detailed methodology, refer to Joshi et al. (2025).
DOI: 10.15468/dl.a9n7q5
title: Occurrence Download

description: A dataset containing 3583444 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dasiphora davurica, Eucalyptus fibrosa, Ipomoea triloba, Juglans cinerea, Juglans regia, Juglans sigillata, Knoxia roxburghii, Scleromitrion diffusum, Argentina anserina, Prunus mahaleb, Prunus salicina, Quercus rex, Stevia rebaudiana, Bertholletia excelsa, Pseudocydonia sinensis, Eremocitrus glauca, Crataegus pinnatifida, Eucalyptus virginea, Euphorbia pulcherrima, Ficus benjamina, Gossypium trilobum, Gynandropsis gynandra, Gynostemma pentaphyllum, Hibiscus yunnanensis, Lycium barbarum, Malus coronaria, Pyrus ussuriensis, Veratrum dahuricum, Kalanchoe daigremontiana, Scutellaria galericulata, Typha latifolia, Alnus glutinosa, Citrus limon, Citrus aurantium, Cynodon dactylon, Ebenus cretica, Eucalyptus camaldulensis, Reynoutria multiflora, Frangula alnus, Gossypium gossypioides, Hibiscus cannabinus, Hippophae salicifolia, Prunus cerasifera, Salsola tragus, Sparganium angustifolium, Stephania cephalantha, Digitaria exilis, Gossypium longicalyx, Hydrangea macrophylla, Magnolia amoena)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3583444 records from 5523 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030039-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.58153/2rets-rnk68
title: Mick Moloney Irish-American Music and Popular Culture Commercial Recordings Collection FTIR dataset (AIA.031.001, Conservation ID 22_060)

description: This is a technical analysis dataset for cultural heritage materials that are in the collection of New York University Libraries and were examined by the NYU Barbara Goldsmith Preservation & Conservation Department. The materials were examined on June 2, 2022 and are part of the Mick Moloney Irish-American Music and Popular Culture Commercial Recordings Collection held by the NYU Special Collections (AIA.031.001). The dataset includes a conservation report, FTIR (Fourier Transform Infrared) spectra and, if applicable, a standard visible light image of the object. For more information about this object or its FTIR spectra, please contact the Barbara Goldsmith Preservation & Conservation Department at lib-preservation@nyu.edu
DOI: 10.5281/zenodo.5248491
title: Philosophy [IO Islamic 1477] شرح هياكل النور

description: Philosophy.

This manuscript is now IO Islamic 1477 in the India Office collections.

[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 485 here with further notations and hyperlinks].


485.

1477. Size 7 in. by 31/2 in.; foll. 115. Seventeen lines in a page.

A Commentary (ممزوج) on Shihâb al-dîn (Yaḥya b. Ḥabash) Suhrawardî’s (d. A.H. 587) هیاکل النور, by Jalâl al-dîn (Muḥammad b. As’ad) DAWWÂNÎ (d. A.H. 907 or 908 [= 1512-13 CE]). See for a full account of this work, Flügel, Hdss. Wien, iii. 328 [= no. 1895] (where, however, the name of the commentator is incorrectly given). Cf. Ḥ. Kh. vi. 505; Cat. St. Petersb. 59 sq.; Cat. Lugd. iii. 355; [Charles] Stewart’s Catal. 122 sq.; and A. von Kremer, Geschichte der herrschenden Ideen des Islams, 89 sqq.

The name of the Sultan (السلطان بن السلطان بن السلطان) to whom the commentary is dedicated, runs in the text of this MS. as in Flügel, l.c., but on the margin is added the name of ‘Aḍud al-dîn Abu Sa’îd Gurgan (the Timuride, d. A.H. 873 [=1469 CE]) as a variant.1

Written in a not very clear Nasta’liḳ hand, with additions by the author on the margin. The end is wanting.

The fly-leaf contains a notice regarding the death of a person at Yazd, which took place A.H. 1176 [= 1762-63 CE].

[Tippu.]

1 Cf. Stewart, 122.
DOI: 10.5281/zenodo.5248492
title: Philosophy [IO Islamic 1477] شرح هياكل النور

description: Philosophy.

This manuscript is now IO Islamic 1477 in the India Office collections.

[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 485 here with further notations and hyperlinks].


485.

1477. Size 7 in. by 31/2 in.; foll. 115. Seventeen lines in a page.

A Commentary (ممزوج) on Shihâb al-dîn (Yaḥya b. Ḥabash) Suhrawardî’s (d. A.H. 587) هیاکل النور, by Jalâl al-dîn (Muḥammad b. As’ad) DAWWÂNÎ (d. A.H. 907 or 908 [= 1512-13 CE]). See for a full account of this work, Flügel, Hdss. Wien, iii. 328 [= no. 1895] (where, however, the name of the commentator is incorrectly given). Cf. Ḥ. Kh. vi. 505; Cat. St. Petersb. 59 sq.; Cat. Lugd. iii. 355; [Charles] Stewart’s Catal. 122 sq.; and A. von Kremer, Geschichte der herrschenden Ideen des Islams, 89 sqq.

The name of the Sultan (السلطان بن السلطان بن السلطان) to whom the commentary is dedicated, runs in the text of this MS. as in Flügel, l.c., but on the margin is added the name of ‘Aḍud al-dîn Abu Sa’îd Gurgan (the Timuride, d. A.H. 873 [=1469 CE]) as a variant.1

Written in a not very clear Nasta’liḳ hand, with additions by the author on the margin. The end is wanting.

The fly-leaf contains a notice regarding the death of a person at Yazd, which took place A.H. 1176 [= 1762-63 CE].

[Tippu.]

1 Cf. Stewart, 122.
DOI: 10.58153/pjatk-57r46
title: Lindseth Collection of Alice Ephemera FTIR dataset (MSS.368, Conservation ID 21_044)

description: This is a technical analysis dataset for cultural heritage materials that are in the collection of New York University Libraries and were examined by the NYU Barbara Goldsmith Preservation & Conservation Department. The materials were examined on June 4, 2021 and are part of the Lindseth Collection of Alice Ephemera held by the NYU Special Collections (MSS.368). The dataset includes a conservation report, FTIR (Fourier Transform Infrared) spectra for the plastic objects that were examined, and, if applicable, a standard visible light image of the object. For more information about this object or its FTIR spectra, please contact the Barbara Goldsmith Preservation & Conservation Department at lib-preservation@nyu.edu
DOI: 10.58153/0yp8x-qwd86
title: State-Level Implicit and Explicit Bias Index Against Asian Americans Across the United States

description: Using national data from Project Implicit, the authors examine state-level variations in implicit and explicit bias against Asian Americans held by non–Asian Americans (n = 196,678) from 2018 to 2022. The findings reveal considerable heterogeneity in implicit and explicit bias across states.
DOI: 10.58153/cq7em-my630
title: Zipcode level COVID-19 case rate data for selected cities in the US

description: The data is a compiled zipcode level counts of COVID-19 cases and case rates in selected US cities after the first wave of the COVID-19 Pandemic.
DOI: 10.58153/j5s03-4eg21
title: Random-Access Two-Photon Microscopy Dataset: Neural Recording in Moving Larval Drosophila

description: This repository contains datasets and MATLAB scripts used for generating figures in the paper titled 'Multi-neuronal recording in unrestrained animals with acousto-optic two-photon microscopy,' published in Frontiers of Neuroscience in 2023. These datasets were also used in Akihiro Yamaguchi's dissertation, "Two-Photon Microscopy for Recording Multi-Neuronal Activity in Behaving, Untethered, Intact Animals."
To understand how neural activity encodes and coordinates behavior, it is desirable to record multi-neuronal activity in freely behaving animals. Imaging in unrestrained animals is challenging, especially for those, like larval Drosophila melanogaster, whose brains are deformed by body motion. A previously demonstrated two-photon tracking microscope recorded from individual neurons in freely crawling Drosophila larvae but faced limits in multi-neuronal recording. Here we demonstrate a new tracking microscope using acousto-optic deflectors (AODs) and an acoustic GRIN lens (TAG lens) to achieve axially resonant 2D random access scanning, sampling along arbitrarily located axial lines at a line rate of 70 kHz. With a tracking latency of 0.1 ms, this microscope recorded activities of various neurons in moving larval Drosophila CNS and VNC including premotor neurons, bilateral visual interneurons, and descending command neurons. This technique can be applied to the existing two-photon microscope to allow for fast 3D tracking and scanning.
DOI: 10.58153/r2v0s-7ft37
title: Rasterized Land Use Classification Data

description: Rasterized land cover and land use information in the form of 250m x 250m resolution grid cells available for 19 selected cities in the US.
DOI: 10.5281/zenodo.15280520
title: Data of electrical performance of semisolid state cells

description: Calibrate electrothermal model of the cell
DOI: 10.5281/zenodo.15280521
title: Data of electrical performance of semisolid state cells

description: Calibrate electrothermal model of the cell
DOI: 10.58153/090ed-3w363
title: Random-Access Two-Photon Microscopy Dataset: Neural Recording in Moving Larval Drosophila

description: This repository contains datasets and MATLAB scripts used for generating figures in the paper titled 'Multi-neuronal recording in unrestrained animals with acousto-optic two-photon microscopy,' published in Frontiers of Neuroscience in 2023. These datasets were also used in Akihiro Yamaguchi's dissertation, "Two-Photon Microscopy for Recording Multi-Neuronal Activity in Behaving, Untethered, Intact Animals."
To understand how neural activity encodes and coordinates behavior, it is desirable to record multi-neuronal activity in freely behaving animals. Imaging in unrestrained animals is challenging, especially for those, like larval Drosophila melanogaster, whose brains are deformed by body motion. A previously demonstrated two-photon tracking microscope recorded from individual neurons in freely crawling Drosophila larvae but faced limits in multi-neuronal recording. Here we demonstrate a new tracking microscope using acousto-optic deflectors (AODs) and an acoustic GRIN lens (TAG lens) to achieve axially resonant 2D random access scanning, sampling along arbitrarily located axial lines at a line rate of 70 kHz. With a tracking latency of 0.1 ms, this microscope recorded activities of various neurons in moving larval Drosophila CNS and VNC including premotor neurons, bilateral visual interneurons, and descending command neurons. This technique can be applied to the existing two-photon microscope to allow for fast 3D tracking and scanning.
DOI: 10.58153/t54j2-9cw97
title: Calcium imaging of glomeruli in the olfactory bulb of the mouse in response to thirty-five monomolecular odors

description: This dataset comprises video files (converted into tif format) that depict glomerular activation in mice. The activation was recorded as the response for 35 monomolecular odors. Wide-field 1-photon calcium imaging was recorded at a framerate of 100 Hz, in Thy1-GCaMP6f mice implanted with cranial windows over the olfactory bulb. Mice were head-fixed during imaging, with monomolecular odors presented in a randomized sequence for 2 seconds apiece during each trial.
DOI: 10.58153/5wh80-g9589
title: Urban scaling of firearm violence, ownership and accessibility in the United States

description: The United States is ranked first in gun possession globally and is among the countries suffering the most from firearm violence. Several aspects of the US firearm ecosystem have been detailed over the years, mostly focusing on nation- or state-level phenomena. Systematic, high-resolution studies that compare US cities are largely lacking, leaving several questions open. For example, how does firearm violence vary with the population size of a US city? Are guns more prevalent and accessible in larger cities? In search of answers to these questions, we apply urban scaling theory, which has been instrumental in understanding the present and future of urbanization for the past 15 years. We collate a dataset about firearm violence, accessibility and ownership in 929 cities, ranging from 10,000 to 20,000,000 people. We discover superlinear scaling of firearm violence (measured through the incidence of firearm homicides and armed robberies) and sublinear scaling of both firearm ownership (inferred from the percentage of suicides that are committed with firearm) and firearm accessibility (measured as the prevalence of federal firearm-selling licenses). To investigate the mechanism underlying the US firearm ecosystem, we establish a novel information-theoretic methodology that infers associations from the variance of urban features about scaling laws. We unveil influence of violence and firearm accessibility on firearm ownership, which we model through a Cobb–Douglas function. Such an influence suggests that self-protection could be a critical driver of firearm ownership in US cities, whose extent is moderated by access to firearms.