cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.5tj2vy
title: Occurrence Download

description: A dataset containing 3767 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "TaxonKey is Pueraria montana (Lour.) Merr."
 ]
}

 The dataset includes 3767 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007223-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fjac7q
title: Occurrence Download

description: A dataset containing 5791 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Heliconiaceae"
 ]
}

 The dataset includes 5791 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007965-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngn7mr
title: Occurrence Download

description: A dataset containing 10522 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "Geometry POLYGON((141.75 -36.25,141.75 -36.75,142.25 -36.75,142.25 -36.25,141.75 -36.25))"
 ]
}

 The dataset includes 10522 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004556-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ema4fz
title: Occurrence Download

description: A dataset containing 61472 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ramphastos toco P.L.S.Müller, 1776"
 ]
}

 The dataset includes 61472 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007108-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nsyfe5
title: Occurrence Download

description: A dataset containing 600979 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus robur L."
 ]
}

 The dataset includes 600979 records from 925 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027332-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sr7s4b
title: Occurrence Download

description: A dataset containing 408865 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Salvia rosmarinus Spenn.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 408865 records from 645 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110392-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zndds8
title: Occurrence Download

description: A dataset containing 954 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Nypa fruticans Wurmb)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 954 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110401-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.24dsnm
title: Occurrence Download

description: A dataset containing 493668 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bufo bufo (Linnaeus, 1758)"
 ]
}

 The dataset includes 493668 records from 2240 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110364-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.19311571
title: Additional file 7 of Extensive metagenomic analysis of the porcine gut resistome to identify indicators reflecting antimicrobial resistance

description: Additional file 6: Table S5. The abundance and α-diversity of antimicrobial resistance in each sample.
DOI: 10.6084/m9.figshare.11447256
title: MOESM6 of Pesticide application has little influence on coding and non-coding gene expressions in rice

description: Additional file 6. DELs identified under two pesticides treatments expressed in FPKM
DOI: 10.6084/m9.figshare.19311571.v1
title: Additional file 7 of Extensive metagenomic analysis of the porcine gut resistome to identify indicators reflecting antimicrobial resistance

description: Additional file 6: Table S5. The abundance and α-diversity of antimicrobial resistance in each sample.
DOI: 10.6084/m9.figshare.11447256.v1
title: MOESM6 of Pesticide application has little influence on coding and non-coding gene expressions in rice

description: Additional file 6. DELs identified under two pesticides treatments expressed in FPKM
DOI: 10.15468/mn3quk
title: Suivi compensatoire 2022 dans le cadre du projet de renaturation de l'espace naturel sensible d'Erretegia à Bidart-Suivi 2022 (données oiseaux) renaturation ENS Erretegia

description: Suivi compensatoire de la Bouscarle de cetti et du Tarier pâtre sur le site de l'ENS d'Erretegia à Bidart par Simethis de avril à mai 2022 avec réalisation de deux points d'écoutes IPA.
DOI: 10.6084/m9.figshare.19311574
title: Additional file 8 of Extensive metagenomic analysis of the porcine gut resistome to identify indicators reflecting antimicrobial resistance

description: Additional file 7: Table S6. Drug resistance classes showing significantly different abundances between 25 and 240 days of age, and between cecum lumen and feces in NC-F6 pigs.
DOI: 10.6084/m9.figshare.24638538
title: SchiSOFT: A global dataset on species occurrences and functional traits of Schizothoracinae fish

description: SchiSOFT (Schizothoracinae fish Species Occurrences and Functional Traits) dataset was based on published literature, books, online databases, and field surveys, including a full species and image sources list, occurrence data, and detailed functional traits data for schizothoracine fish. The dataset includes 7,333 occurrence records and 3,204 records of 32 functional traits covering all the genera and species of Schizothoracinae fish (i.e., 12 genera and 125 species or subspecies) and image sources of 120 species or subspecies. Sampling records spanned over 180 years. This dataset will serve as a valuable resource for future research on the evolution, historical biogeography, responses to environmental change, and conservation of the Schizothoracinae fish.
DOI: 10.15468/gpntuz
title: Suivi environnemental du SEPE Tripleville-Suivi environnemental SEPE Tripleville 2015-2016

description: Suivi environnemental SEPE Tripleville 2015-2016
DOI: 10.6084/m9.figshare.19311574.v1
title: Additional file 8 of Extensive metagenomic analysis of the porcine gut resistome to identify indicators reflecting antimicrobial resistance

description: Additional file 7: Table S6. Drug resistance classes showing significantly different abundances between 25 and 240 days of age, and between cecum lumen and feces in NC-F6 pigs.
DOI: 10.15468/y5hg5n
title: Parc éolien du Mont d'Ergny-Données biodiv Suivi Parc éolien de Mont d'Ergny 2022 - Ecoutes chiro

description: Données brutes de biodiversité issues du Suivi écologique du Parc éolien de Mont d'Ergny 2022 - Ecoutes chiroptérologiques en nacelle
DOI: 10.15468/7csgwu
title: Parc éolien de Guerville-Eolien Guerville suivi enviro 2022

description: Eolien Guerville suivi enviro 2022
DOI: 10.15468/exhgaa
title: parc éolien ECDS Énergie du champs des Soeurettes-Données Oiseaux suivi mortalité 2022 - parc éolien des soeurettes (80)

description: Données Oiseaux suivi mortalité 2022 - parc éolien des soeurettes (80)
DOI: 10.15468/bsfdfz
title: Suivi environnemental 2022 du parc éolien du Bois de Morval-Données brutes suivi mortalité 2022 - Parc éolien du Bois de Morval (62)

description: Données brutes suivi mortalité 2022 - Parc éolien du Bois de Morval (62)
DOI: 10.15468/dhf5g7
title: Suivi environnemental 2022 du parc éolien du Bois de Morval-Données brutes suivi nacelle 2022 - Parc éolien du Bois de Morval (62)

description: Données brutes suivi nacelle 2022 - Parc éolien du Bois de Morval (62)
DOI: 10.15468/wyc75n
title: Suivi environnemental 2022 du parc éolien d'Hesdin 1bis-Données brutes suivi mortalité 2022 - Parc éolien Hesdin 1 bis (62)

description: Données brutes suivi mortalité 2022 - Parc éolien Hesdin 1 bis (62)
DOI: 10.15468/nsdt8v
title: Suivi environnemental 2022 du parc éolien d'Hesdin 1bis-Données brutes suivi nacelle 2022 - Parc éolien Hesdin 1 bis (62)

description: Données brutes suivi nacelle 2022 - Parc éolien Hesdin 1 bis (62)
DOI: 10.6084/m9.figshare.19311577
title: Additional file 9 of Extensive metagenomic analysis of the porcine gut resistome to identify indicators reflecting antimicrobial resistance

description: Additional file 8: Table S7. The 194 ORFs that were clustered into 128 unique ARGs and annotated to 24 bacterial species.
DOI: 10.6084/m9.figshare.19311577.v1
title: Additional file 9 of Extensive metagenomic analysis of the porcine gut resistome to identify indicators reflecting antimicrobial resistance

description: Additional file 8: Table S7. The 194 ORFs that were clustered into 128 unique ARGs and annotated to 24 bacterial species.
DOI: 10.15468/45edry
title: Parc éolien Le Mélier-Suivi de l'activité chiroptérologique en nacelle - Le Mélier - 2022

description: Suivi de l’activité chiroptérologique en nacelle de l’éolienne LM1, sur le parc éolien de Le Mélier, effectué dans le cadre du suivi post-implantation d’une installation classée ICPE.
DOI: 10.15468/rvryxu
title: Chaude Vallée : dépôt légal des données brutes de biodiversité 2021-Suivi de l'activité chiroptérologique en nacelle - Chaude Vallée- 2022

description: Suivi de l’activité chiroptérologique en nacelle de l’éolienne E5, sur le parc éolien de Chaude Vallée, effectué dans le cadre du suivi post-implantation d’une installation classée ICPE.
DOI: 10.15468/skkvyt
title: Chaude Vallée : dépôt légal des données brutes de biodiversité 2021-Suivi de mortalité - Chaude Vallée - 2022

description: Suivi de mortalité du parc éolien de Chaude Vallée effectué dans le cadre du suivi post-implantation d’une installation classée ICPE.
DOI: 10.15468/tfvm86
title: Parc éolien de Picardie Verte II-Suivi_activité_avifaune_WP_Dargies/Picardie_Verte - busards - 2022

description: Suivi_activité_avifaune_WP_Dargies/Picardie_Verte - busards - 2022
DOI: 10.15468/ayv86q
title: parc éolien ECDS Énergie du champs des Soeurettes-Données Chiroptères suivi mortalité 2022 - parc éolien des soeurettes (80)

description: Données Chiroptères suivi mortalité 2022 - parc éolien des soeurettes (80)
DOI: 10.17632/smnxmb9b4m.1
title: Revision_MCD_files_1

description: MCD files from image mass cytometry data in MEMORI cohort
DOI: 10.6084/m9.figshare.11447268
title: MOESM8 of Pesticide application has little influence on coding and non-coding gene expressions in rice

description: Additional file 8. Differentially expressed genes targeted by miRNAs under pesticides treatments
DOI: 10.15468/9rysb5
title: Suivi environnemental 2022 du parc éolien de l'Extension des Rossignols-Données brutes suivi nacelle 2022 - Parc éolien Extension des Rossignols (62)

description: Données brutes suivi nacelle 2022 - Parc éolien de l'Extension des Rossignols (62)
DOI: 10.15468/37wh3z
title: Suivi environnemental 2022 du parc éolien de l'Extension des Rossignols-Données brutes suivi mortalité 2022 - Parc éolien Extension des Rossignols (62)

description: Données brutes suivi mortalité 2022 - Parc éolien Extension des Rossignols (62)
DOI: 10.6084/m9.figshare.11447268.v1
title: MOESM8 of Pesticide application has little influence on coding and non-coding gene expressions in rice

description: Additional file 8. Differentially expressed genes targeted by miRNAs under pesticides treatments
DOI: 10.15468/ktqdpt
title: Parc Eolien de Varimpré-[SUIVI] Suivi post-implantation pour le parc de Varimpré (nacelle) 2022

description: [SUIVI] Suivi post-implantation pour le parc de Varimpré (nacelle) 2022
DOI: 10.15468/rnu9x3
title: Parc Eolien des Vatines-[SUIVI] Suivi post-implantation pour le parc des Vatines (mortalité) 2022

description: [SUIVI] Suivi post-implantation pour le parc des Vatines (mortalité) 2022
DOI: 10.15468/qzganw
title: Parc Eolien du Clos Bataille-[SUIVI] Suivi post-implantation pour le parc de Clos-Bataille (mortalité)

description: [SUIVI] Suivi post-implantation pour le parc de Clos-Bataille (mortalité)
DOI: 10.15468/buacas
title: Ferme Eolienne de Quesnoy-sur-Airaines 2-Suivi environnemental QSA 2022 - Chiroptères en nacelle

description: Suivi environnemental QSA 2022 - Chiroptères en nacelle
DOI: 10.5281/zenodo.10042901
title: Data for Krishna river basin to develop integrated drought indices
DOI: 10.5281/zenodo.10042902
title: Data for Krishna river basin to develop integrated drought indices
DOI: 10.15468/r8vvb7
title: Parc éolien de la Chaude Vallée-Suivi de l'activité chiroptérologique en nacelle-Chaude Vallée-2022

description: Suivi de l’activité chiroptérologique en nacelle de l’éolienne E5 , sur le parc éolien de Chaude Vallée, effectué dans le cadre du suivi post-implantation d’une installation classée ICPE.
DOI: 10.6084/m9.figshare.7777253
title: Comparative analyses of sperm DNA methylomes among human, mouse and cattle provide insights into epigenomic evolution and complex traits

description: Sperm DNA methylation is crucial for fertility and viability of offspring but epigenome evolution in mammals is largely understudied. By comparing sperm DNA methylomes and large-scale genome-wide association study (GWAS) signals between human and cattle, we aimed to examine the DNA methylome evolution and its associations with complex phenotypes in mammals. Our analysis revealed that genes with conserved non-methylated promoters (e.g., <i>ANKS1A</i> and <i>WNT7A</i>) among human and cattle were involved in common system and embryo development, and enriched for GWAS signals of body conformation traits in both species, while genes with conserved hypermethylated promoters (e.g., <i>TCAP</i> and <i>CD80</i>) were engaged in immune responses and highlighted by immune-related traits. On the other hand, genes with human-specific hypomethylated promoters (e.g., <i>FOXP2</i> and <i>HYDIN</i>) were engaged in neuron system development and enriched for GWAS signals of brain-related traits, while genes with cattle-specific hypomethylated promoters (e.g., <i>LDHB</i> and <i>DGAT2</i>) mainly participated in lipid storage and metabolism. We validated our findings using sperm-retained nucleosome, preimplantation transcriptome, and adult tissue transcriptome data, as well as sequence evolutionary features, including motif binding sites, mutation rates, recombination rates and evolution signatures. In conclusion, our results demonstrate important roles of epigenome evolution in shaping the genetic architecture underlying complex phenotypes, hence enhance signal prioritization in GWAS and provide valuable information for human neurological disorders and livestock genetic improvement.
DOI: 10.6084/m9.figshare.7777253.v1
title: Comparative analyses of sperm DNA methylomes among human, mouse and cattle provide insights into epigenomic evolution and complex traits

description: Sperm DNA methylation is crucial for fertility and viability of offspring but epigenome evolution in mammals is largely understudied. By comparing sperm DNA methylomes and large-scale genome-wide association study (GWAS) signals between human and cattle, we aimed to examine the DNA methylome evolution and its associations with complex phenotypes in mammals. Our analysis revealed that genes with conserved non-methylated promoters (e.g., <i>ANKS1A</i> and <i>WNT7A</i>) among human and cattle were involved in common system and embryo development, and enriched for GWAS signals of body conformation traits in both species, while genes with conserved hypermethylated promoters (e.g., <i>TCAP</i> and <i>CD80</i>) were engaged in immune responses and highlighted by immune-related traits. On the other hand, genes with human-specific hypomethylated promoters (e.g., <i>FOXP2</i> and <i>HYDIN</i>) were engaged in neuron system development and enriched for GWAS signals of brain-related traits, while genes with cattle-specific hypomethylated promoters (e.g., <i>LDHB</i> and <i>DGAT2</i>) mainly participated in lipid storage and metabolism. We validated our findings using sperm-retained nucleosome, preimplantation transcriptome, and adult tissue transcriptome data, as well as sequence evolutionary features, including motif binding sites, mutation rates, recombination rates and evolution signatures. In conclusion, our results demonstrate importance roles of epigenome evolution in shaping the genetic architecture underlying complex phenotypes, hence enhance signal prioritization in GWAS and provide valuable information for human neurological disorders and livestock genetic improvement.
DOI: 10.6084/m9.figshare.7777253.v2
title: Comparative analyses of sperm DNA methylomes among human, mouse and cattle provide insights into epigenomic evolution and complex traits

description: Sperm DNA methylation is crucial for fertility and viability of offspring but epigenome evolution in mammals is largely understudied. By comparing sperm DNA methylomes and large-scale genome-wide association study (GWAS) signals between human and cattle, we aimed to examine the DNA methylome evolution and its associations with complex phenotypes in mammals. Our analysis revealed that genes with conserved non-methylated promoters (e.g., <i>ANKS1A</i> and <i>WNT7A</i>) among human and cattle were involved in common system and embryo development, and enriched for GWAS signals of body conformation traits in both species, while genes with conserved hypermethylated promoters (e.g., <i>TCAP</i> and <i>CD80</i>) were engaged in immune responses and highlighted by immune-related traits. On the other hand, genes with human-specific hypomethylated promoters (e.g., <i>FOXP2</i> and <i>HYDIN</i>) were engaged in neuron system development and enriched for GWAS signals of brain-related traits, while genes with cattle-specific hypomethylated promoters (e.g., <i>LDHB</i> and <i>DGAT2</i>) mainly participated in lipid storage and metabolism. We validated our findings using sperm-retained nucleosome, preimplantation transcriptome, and adult tissue transcriptome data, as well as sequence evolutionary features, including motif binding sites, mutation rates, recombination rates and evolution signatures. In conclusion, our results demonstrate important roles of epigenome evolution in shaping the genetic architecture underlying complex phenotypes, hence enhance signal prioritization in GWAS and provide valuable information for human neurological disorders and livestock genetic improvement.
DOI: 10.6084/m9.figshare.11447274
title: MOESM9 of Pesticide application has little influence on coding and non-coding gene expressions in rice

description: Additional file 9. DE TEs identified in rice under two pesticides treatments
DOI: 10.15468/aftwzf
title: Parc éolien Le Mélier-Suivi de mortalité - Le Mélier - 2022

description: Suivi de mortalité du parc éolien de Le Mélier effectué dans le cadre du suivi post-implantation d’une installation classée ICPE.
DOI: 10.6084/m9.figshare.11447274.v1
title: MOESM9 of Pesticide application has little influence on coding and non-coding gene expressions in rice

description: Additional file 9. DE TEs identified in rice under two pesticides treatments
DOI: 10.17632/yfntyxn2yk.1
title: Exploratory_IMC_files_3

description: MCD files from image mass cytometry data in MEMORI cohort
DOI: 10.15468/2hf9cc
title: Parc éolien de la Chaude Vallée-Suivi de mortalité-Chaude Vallée-2022

description: Suivi de mortalité du parc éolien de Chaude Vallée effectué dans le cadre du suivi post-implantation d’une installation classée ICPE.
DOI: 10.15468/zt4hwd
title: Parc Eolien du Clos Bataille-[SUIVI] Suivi post-implantation pour le parc de Clos-Bataille (nacelle)

description: [SUIVI] Suivi post-implantation pour le parc de Clos-Bataille (nacelle)
DOI: 10.15468/nbbr6q
title: Suivi environnemental - Activité chiroptères 2022 - Parc éolien de Veulettes

description: Suivi 2022 de l'activité en hauteur des chiroptères du parc éolien de Veulettes
DOI: 10.15468/5bmb8c
title: Suivi environnemental - Mortalité 2022 - Parc éolien de Veulettes

description: Suivi de la mortalité de l'avifaune et des chiroptères au droit des éoliennes du parc éolien de Veulettes. Suivi répondant à la réglementation des ICPE
DOI: 10.15468/jygtvs
title: Parc Eolien des Vatines-[SUIVI] Suivi post-implantation pour le parc des Vatines (nacelle) 2022

description: [SUIVI] Suivi post-implantation pour le parc des Vatines (nacelle) 2022
DOI: 10.15468/smh2xn
title: Parc Eolien de Varimpré-[SUIVI] Suivi post-implantation pour le parc de Varimpré (mortalité) 2022

description: [SUIVI] Suivi post-implantation pour le parc de Varimpré (mortalité) 2022
DOI: 10.15468/2d9cxa
title: Parc éolien Mont d'Origny (avec extension) - Suivi chiroptères et avifaune 2021-Mont d'Origny - Suivi de mortalité 2021

description: Mont d'Origny - Suivi de mortalité 2021
DOI: 10.17632/k6dwphtv4m.1
title: Revision_MCD_files_2

description: MCD files from image mass cytometry data in MEMORI cohort
DOI: 10.5281/zenodo.10708625
title: Simulation inputs and final coordinates for the article "Diverse roles of the metal binding domains and transport mechanism of copper transporting P-type ATPases"

description: Simulation input files and final coordinate files for each replica for the article "Diverse roles of the metal binding domains and transport mechanism of copper transporting P-type ATPases".

The zip archive contains three folders, one for each simulation system: E1_apo, E2P_AlF, and E2P_Xt.

Each folder contains initial coordinate files, topology files, simulation parameter files, and final coordinates for each replica. Simulations were run using GROMACS-2021.
DOI: 10.5281/zenodo.10708626
title: Simulation inputs and final coordinates for the article "Diverse roles of the metal binding domains and transport mechanism of copper transporting P-type ATPases"

description: Simulation input files and final coordinate files for each replica for the article "Diverse roles of the metal binding domains and transport mechanism of copper transporting P-type ATPases".

The zip archive contains three folders, one for each simulation system: E1_apo, E2P_AlF, and E2P_Xt.

Each folder contains initial coordinate files, topology files, simulation parameter files, and final coordinates for each replica. Simulations were run using GROMACS-2021.
DOI: 10.6084/m9.figshare.21408750
title: Source Data.xlsx

description:   
<strong>Improved pharmacodynamics of epidermal growth factor via microneedles-based self-powered transcutaneous electrical stimulation </strong>
DOI: 10.15468/k6re4b
title: Aménagement de la zone d'activités intercommunale de l'aérodrome à Steinbourg (67)-Avifaune - inventaire non standardisé

description: Liste des oiseaux contactés dans le cadre des prospections de terrain réalisées au niveau de l'aire d'étude du projet de ZA sur Steinbourg (67)
DOI: 10.15468/3b5r47
title: Fig 14. Pollen profile from sediment core Schmiecher See
DOI: 10.17632/wmbbdpghr3.1
title: Exploratory_MCD_files_2

description: MCD files from image mass cytometry data in MEMORI cohort
DOI: 10.6084/m9.figshare.19311613
title: Additional file 2 of The patterns of co-occurrence variation are explained by the low dependence of bark beetles (Coleoptera: Scolytinae and Platypodinae) on hosts along altitude gradients

description: Additional file 2. Appendix file 1 showing a name list of total of 64,710 bark beetles from 264 species were collected from all three regions.