cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.s2ah9b
title: Occurrence Download

description: A dataset containing 13365 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Helictochloa versicolor (Vill.) Romero Zarco"
 ]
}

 The dataset includes 13365 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021690-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112046716
title: Cuneiform Tablet 1913.14.0222, Spurlock 1913.14.0222

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0222; CDLI P420604 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (2.5Y 8/2) ❧ [Physical Object Note:] 3.4 x 3.2 x 1.9 cm (25g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.5281/zenodo.11475069
title: A Year of Journal of Open Humanities Data

description: I asked myself, "What can I learn by applying distant reading computing techniques against a single year of content from the Journal of Open Humanities Data?" In a sentence, I learned a great deal about the Journal, and it very much lives up to is name.
description: I believe I collected this data by hand, renamed the files, created a Reader metadata.csv file, and finally, built the carrel.
description: All Distant Reader data sets ("study carrels") use the same method of creation. First, a set of narrative files of just about any type and any number are saved in a folder/directory. Second, the plain text is pulled from each file and saved. Third, feature extraction is done against the plain text to create tab-delimited indexes of bibliographics, email addresses, URLs, parts-of-speech, named-entities, and computed keywords. Fourth, all of the indexes are reduced to an SQLite database file. Finally, everything (the original files, the plain text files, the indexes, and SQLite database) is compressed into a zip file for distribution. The result is a platform- and network-independent data set that can be read and processed by any number of GUI applications, programming languages, or a Python module called the Distant Reader Toolbox.
DOI: 10.15468/dl.mwzpeh
title: Occurrence Download

description: A dataset containing 52605 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "CoordinateUncertaintyInMeters 0.0-1000000.0",
 "Elevation 0.0-9999.0m",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Coordinate reprojected)",
 "IucnRedListCategory is one of (NT, VU, EN, CR, EW, EX)",
 "OccurrenceStatus is Present",
 "TaxonKey is Amphibia"
 ]
}

 The dataset includes 52605 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0231524-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qah6pr
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cholevodes tenuitarsis Portevin, 1928",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0219258-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112046636
title: Cuneiform Tablet 1913.14.0222, Spurlock 1913.14.0222

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0222; CDLI P420604 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (2.5Y 8/2) ❧ [Physical Object Note:] 3.4 x 3.2 x 1.9 cm (25g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.5281/zenodo.11475068
title: A Year of Journal of Open Humanities Data

description: I asked myself, "What can I learn by applying distant reading computing techniques against a single year of content from the Journal of Open Humanities Data?" In a sentence, I learned a great deal about the Journal, and it very much lives up to is name.
description: I believe I collected this data by hand, renamed the files, created a Reader metadata.csv file, and finally, built the carrel.
description: All Distant Reader data sets ("study carrels") use the same method of creation. First, a set of narrative files of just about any type and any number are saved in a folder/directory. Second, the plain text is pulled from each file and saved. Third, feature extraction is done against the plain text to create tab-delimited indexes of bibliographics, email addresses, URLs, parts-of-speech, named-entities, and computed keywords. Fourth, all of the indexes are reduced to an SQLite database file. Finally, everything (the original files, the plain text files, the indexes, and SQLite database) is compressed into a zip file for distribution. The result is a platform- and network-independent data set that can be read and processed by any number of GUI applications, programming languages, or a Python module called the Distant Reader Toolbox.
DOI: 10.15468/dl.vczsbr
title: Occurrence Download

description: A dataset containing 491232 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pycnonotus sinensis (Gmelin, 1789)"
 ]
}

 The dataset includes 491232 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095631-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x8tktd
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Maxillaria mejiae Carnevali & G.A.Romero"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032557-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112048529
title: Cuneiform Tablet 1913.14.1506, Spurlock 1913.14.1506

description: [Text Description:] Account concerning silver, barley, and refined bitumen ❧ [Text or Publication Number Note:] Spurlock 1913.14.1506; CDLI P421358 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/2) Light Brown (5YR 6.5/4) Dark Gray (N 3/ 6.6% R) ❧ [Physical Object Note:] 10.1 x 6.9 x 2.9 cm (213g)
DOI: 10.15468/dl.4t9et3
title: Occurrence Download

description: A dataset containing 5286 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alopecurus magellanicus Lam."
 ]
}

 The dataset includes 5286 records from 144 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015168-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xfg7d3
title: Occurrence Download

description: A dataset containing 50156 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ginkgo biloba L.",
 "Year 1993-2023"
 ]
}

 The dataset includes 50156 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0239062-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112048517
title: Cuneiform Tablet 1913.14.1506, Spurlock 1913.14.1506

description: [Text Description:] Account concerning silver, barley, and refined bitumen ❧ [Text or Publication Number Note:] Spurlock 1913.14.1506; CDLI P421358 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/2) Light Brown (5YR 6.5/4) Dark Gray (N 3/ 6.6% R) ❧ [Physical Object Note:] 10.1 x 6.9 x 2.9 cm (213g)
DOI: 10.15468/dl.r47bp8
title: Occurrence Download

description: A dataset containing 1574 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epinephelus polyphekadion (Bleeker, 1849)"
 ]
}

 The dataset includes 1574 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095647-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y8uvea
title: Occurrence Download

description: A dataset containing 5195 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Silene saxifraga L."
 ]
}

 The dataset includes 5195 records from 117 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021695-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112046760
title: Cuneiform Tablet 1913.14.0222, Spurlock 1913.14.0222

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0222; CDLI P420604 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (2.5Y 8/2) ❧ [Physical Object Note:] 3.4 x 3.2 x 1.9 cm (25g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.5281/zenodo.11475077
title: Public schools in New Orleans by topic

description: I did some rudimentary investigations of public schools in New Orleans after extracting sets of documents on given topics, namely: black, charter, new, schools, and teachers. Below is an introduction to what I found.
description: This is dummy provenance statement. Ask Eric to update it.
description: All Distant Reader data sets ("study carrels") use the same method of creation. First, a set of narrative files of just about any type and any number are saved in a folder/directory. Second, the plain text is pulled from each file and saved. Third, feature extraction is done against the plain text to create tab-delimited indexes of bibliographics, email addresses, URLs, parts-of-speech, named-entities, and computed keywords. Fourth, all of the indexes are reduced to an SQLite database file. Finally, everything (the original files, the plain text files, the indexes, and SQLite database) is compressed into a zip file for distribution. The result is a platform- and network-independent data set that can be read and processed by any number of GUI applications, programming languages, or a Python module called the Distant Reader Toolbox.
DOI: 10.15468/dl.b2htp6
title: Occurrence Download

description: A dataset containing 5175 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Parabuteo leucorrhous (Quoy & Gaimard, 1824))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5175 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015223-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j2rzv8
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Geometry POLYGON((124.05911 9.99079,123.8945 9.9168,123.78907 9.82987,123.7694 9.7379,123.79092 9.70965,123.8501 9.74294,123.8501 9.70595,123.8501 9.64306,123.75023 9.61902,123.72618 9.53578,123.80571 9.53024,123.83161 9.56908,123.87785 9.62087,124.05726 9.57833,124.1887 9.59936,124.26442 9.58202,124.3347 9.62272,124.39944 9.64676,124.42163 9.71335,124.48822 9.76144,124.51781 9.7152,124.5807 9.74664,124.60475 9.77253,124.5992 9.81877,124.52336 9.85392,124.5881 9.88721,124.577 9.98709,124.53261 10.04443,124.368 10.14986,124.21818 10.1739,124.11275 10.11286,124.05171 10.05553,124.05911 9.99079))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tarsius syrichta (Linnaeus, 1758)"
 ]
}

 The dataset includes 8 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182066-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112050443
title: P.Oxy.VII 1030 Notification of Death, P.Oxy.VII 1030

description: [Text Description:] Notice of the death of a slave. ❧ [Text or Publication Number Note:] P.Oxy.VII 1030, P.Oxy. 1030, Spurlock 1914.21.0017 ❧ [Excavation Description:] Excavated by archaeologists, including Bernard Pyne Grenfell and Arthur Surridge Hunt, at an ancient rubbish dump near Oxyrhynchus in Egypt (28°32'N 30°40'E, modern el-Bahnasa). ❧ [Medium:] Papyrus ❧ [Script Note:] Greek ❧ [Physical Object Description:] Papyrus manuscript, 26.2 x 9.6 cm.
DOI: 10.15468/dl.ppzbdt
title: Occurrence Download

description: A dataset containing 94 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arnicratea grahamii (Wight) N.Hallé"
 ]
}

 The dataset includes 94 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095635-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11475076
title: Public schools in New Orleans by topic

description: I did some rudimentary investigations of public schools in New Orleans after extracting sets of documents on given topics, namely: black, charter, new, schools, and teachers. Below is an introduction to what I found.
description: This is dummy provenance statement. Ask Eric to update it.
description: All Distant Reader data sets ("study carrels") use the same method of creation. First, a set of narrative files of just about any type and any number are saved in a folder/directory. Second, the plain text is pulled from each file and saved. Third, feature extraction is done against the plain text to create tab-delimited indexes of bibliographics, email addresses, URLs, parts-of-speech, named-entities, and computed keywords. Fourth, all of the indexes are reduced to an SQLite database file. Finally, everything (the original files, the plain text files, the indexes, and SQLite database) is compressed into a zip file for distribution. The result is a platform- and network-independent data set that can be read and processed by any number of GUI applications, programming languages, or a Python module called the Distant Reader Toolbox.
DOI: 10.15468/dl.uhask3
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ixodida",
 "Country is Bulgaria"
 ]
}

 The dataset includes 40 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026893-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112049922
title: P.Oxy.VI 941 Letter to John, P.Oxy.VI 941

description: [Text Description:] Letter in which the writer asks his friend to help him in obtaining from the monastery of St. Justus a piece of ground to be used for brickmaking. ❧ [Text or Publication Number Note:] P.Oxy.VI 941, P.Oxy. 941, Spurlock 1914.21.0011 ❧ [Excavation Description:] Excavated by archaeologists, including Bernard Pyne Grenfell and Arthur Surridge Hunt, at an ancient rubbish dump near Oxyrhynchus in Egypt (28°32'N 30°40'E, modern el-Bahnasa). ❧ [Medium:] Papyrus ❧ [Script Note:] Greek ❧ [Physical Object Description:] Papyrus manuscript, 13.3 x 31.4 cm.
DOI: 10.15468/dl.a3n3hn
title: Occurrence Download

description: A dataset containing 523 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trapelus agilis (Olivier, 1807))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 523 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022589-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.neaeac
title: Occurrence Download

description: A dataset containing 1533 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-71.65933 12.51022,-71.79042 12.49498,-71.91527 12.42031,-71.95929 12.30398,-71.91247 12.22773,-71.81416 12.20028,-71.6581 12.23078,-71.60503 12.34057,-71.58787 12.40307,-71.65933 12.51022))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1533 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0246917-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4fthcn
title: Occurrence Download

description: A dataset containing 14314 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Trichiurus lepturus Linnaeus, 1758"
 ]
}

 The dataset includes 14314 records from 182 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095636-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112050576
title: P.Oxy.VII 1030 Notification of Death, P.Oxy.VII 1030

description: [Text Description:] Notice of the death of a slave. ❧ [Text or Publication Number Note:] P.Oxy.VII 1030, P.Oxy. 1030, Spurlock 1914.21.0017 ❧ [Excavation Description:] Excavated by archaeologists, including Bernard Pyne Grenfell and Arthur Surridge Hunt, at an ancient rubbish dump near Oxyrhynchus in Egypt (28°32'N 30°40'E, modern el-Bahnasa). ❧ [Medium:] Papyrus ❧ [Script Note:] Greek ❧ [Physical Object Description:] Papyrus manuscript, 26.2 x 9.6 cm.
DOI: 10.15468/dl.8mnugs
title: Occurrence Download

description: A dataset containing 14370328 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "Year 1000-2022"
 ]
}

 The dataset includes 14370328 records from 1194 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0231528-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18620864
title: Impact of Refactoring Architectural Smells on Quality, Security, and Performance Metrics

description: This replication package includes:





the source code used in the experiments




the collected data on performance and quality
DOI: 10.6084/m9.figshare.31324582
title: The expression pattern and clinical implications of TBC1D16 in hepatocellular carcinoma

description: Hepatocellular carcinoma (HCC), the predominant form of primary liver cancer, demonstrates escalating global incidence and mortality trends. Although emerging evidence suggests that TBC1 domain family member 16 (TBC1D16) significantly contributes to tumorigenesis and malignant progression across multiple cancer types, the relationship between TBC1D16 and HCC remains poorly understood. Our study aims to elucidate the functional role of TBC1D16 in HCC and its potential clinical value. The expression of TBC1D16 in HCC was analyzed through TCGA and GEO databases, verified <i>via</i> qRT-PCR and Western blotting. Kaplan–Meier survival curves and Cox regression analysis assessed its correlation with HCC prognosis. Cell functional assays explored the impact of TBC1D16 on HCC progression. Potential transcription factors regulating TBC1D16 were identified through transcription factor databases. RNA-seq, KEGG, and GSEA identified TBC1D16-related signaling pathways, which were confirmed by biochemical validation. Finally, TIMER, ssGSEA, TCIA, and GDSC databases were harnessed to predict the impact of immunotherapy and targeted drug therapy. TBC1D16 expression is higher in HCC tissue than in adjacent normal tissue and is correlated with adverse prognosis of HCC patients. Silencing TBC1D16 reduced the proliferation, migration, and invasion of HCC cells. The expression of TBC1D16 is regulated by SP1.TBC1D16 expression inhibits NF-κB signaling, potentially serving as a mechanism contributing to HCC. Furthermore, TBC1D16 expression also affects immunotherapy responses and drug sensitivity. TBC1D16 upregulation in HCC is linked to poor prognosis and enhances tumor invasiveness, silencing TBC1D16 activates NF-κB signaling, indicating its potential role in HCC diagnosis.
DOI: 10.6084/m9.figshare.31324582.v1
title: The expression pattern and clinical implications of TBC1D16 in hepatocellular carcinoma

description: Hepatocellular carcinoma (HCC), the predominant form of primary liver cancer, demonstrates escalating global incidence and mortality trends. Although emerging evidence suggests that TBC1 domain family member 16 (TBC1D16) significantly contributes to tumorigenesis and malignant progression across multiple cancer types, the relationship between TBC1D16 and HCC remains poorly understood. Our study aims to elucidate the functional role of TBC1D16 in HCC and its potential clinical value. The expression of TBC1D16 in HCC was analyzed through TCGA and GEO databases, verified <i>via</i> qRT-PCR and Western blotting. Kaplan–Meier survival curves and Cox regression analysis assessed its correlation with HCC prognosis. Cell functional assays explored the impact of TBC1D16 on HCC progression. Potential transcription factors regulating TBC1D16 were identified through transcription factor databases. RNA-seq, KEGG, and GSEA identified TBC1D16-related signaling pathways, which were confirmed by biochemical validation. Finally, TIMER, ssGSEA, TCIA, and GDSC databases were harnessed to predict the impact of immunotherapy and targeted drug therapy. TBC1D16 expression is higher in HCC tissue than in adjacent normal tissue and is correlated with adverse prognosis of HCC patients. Silencing TBC1D16 reduced the proliferation, migration, and invasion of HCC cells. The expression of TBC1D16 is regulated by SP1.TBC1D16 expression inhibits NF-κB signaling, potentially serving as a mechanism contributing to HCC. Furthermore, TBC1D16 expression also affects immunotherapy responses and drug sensitivity. TBC1D16 upregulation in HCC is linked to poor prognosis and enhances tumor invasiveness, silencing TBC1D16 activates NF-κB signaling, indicating its potential role in HCC diagnosis.