cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24166719.v1
title: Supplementary Material for: Hippocampal dynamic functional connectivity, HPA axis activity, and personality trait in bipolar disorder with suicidal attempt

description: Introduction Suicide in bipolar disorder (BD) is a multifaceted behavior, involving specific neuroendocrine and psychological mechanisms. According to previous studies, we hypothesized that suicidal BD patients may exhibit impaired dynamic functional connectivity (dFC) variability of hippocampal subregions and hypothalamic-pituitary-adrenal (HPA) axis activity, which may be associate with suicide-related personality traits. The objective of our study was to clarify this. Methods Resting-state functional magnetic resonance imaging data were obtained from 79 patients with BD, 39 with suicidal attempt (SA) and 40 without SA, and 35 healthy controls. The activity of the HPA axis was assessed by measuring morning plasma adrenocorticotropic hormone (ACTH) and cortisol (CORT) levels. All participants underwent personality assessment using Minnesota Multiphasic Personality Inventory-2 (MMPI-2). Results BD patients with SA exhibited increased dFC variability between the right caudal hippocampus and the left superior temporal gyrus (STG) when compared with non-SA BD patients and HCs. BD with SA also showed significantly lower ACTH levels in comparison with HCs, which was positively correlated with increased dFC variability between the right caudal hippocampus and the left STG. BD with SA had significantly higher scores of Hypochondriasis, Depression and Schizophrenia than non-SA BD. Additionally, multivariable regression analysis revealed the interaction of ACTH × dFC variability between the right caudal hippocampus and the left STG independently predicted MMPI-2 score (depression evaluation) in suicidal BD patients. Conclusion These results suggested that suicidal BD exhibited increased dFC variability of hippocampal-temporal cortex and less HPA axis hyperactivity, which may affect their personality traits.
DOI: 10.6084/m9.figshare.22104743
title: Data from: [Generalist and topologically central avian frugivores promote plant invasion unequally across land-bridge islands]

description: Raw data for the submitted manuscript of ECY23-0138. Reference: Zhu, C., B. Dalsgaard, W. Li, F. Gonçalves, M.G.R. Vollstädt, P. Ren, X. Zhang, et al. 2023. “Generalist and topologically central avian frugivores promote plant invasion unequally across land-bridge islands.” Ecology, in press.
DOI: 10.6084/m9.figshare.22104743.v8
title: Generalist and topologically central avian frugivores promote plant invasion unequally across land-bridge islands

description: Raw data for the submitted manuscript of ECY23-0138
DOI: 10.6084/m9.figshare.24430456
title: 9-11ans FINAL.xlsx

description: the validation of the Arabic version of the Ques-Ca questionnaire offers practical benefits for healthcare practitioners, educators, and policymakers in Arabic-speaking regions. It equips them with a valuable tool to assess, tailor, and enhance nutrition education programs, ultimately promoting better nutritional knowledge and practices among children.
DOI: 10.5281/zenodo.10013263
title: ES11 - Social housing - Simancas (Spain)

description: Data files for building: ES11 - Social housing - Simancas (Spain)
Languages: Spanish, English
These files are part of the public benchmark repository created as a part of the crossCert EU project. 
This repository contains curated building data, certificate results and, where available, measured performance results. The repository is publicly available so that it can be used as a testbench for new Energy Performance Certificate (EPC) procedures.
The files are organised in the following folders  (note that not all files are always provided):

Main data  and Results, with:

Neutral data inventory.
Neutral results report.
Original EPC certificate.
Energy Consumption Data, with:

Files, where available, with energy consumption data for the building, which can be used for validation of models and EPC results.
Drawings

Building drawings which can be used as an aid for generating the EPC, or for creating dynamic energy consumption  models.
Other Data

Any other data that can be useful for the purposes of creating or validating an EPC or an energy consumption dynamic model for the building.
Dynamic Model

Data to run a dynamic model of the building, if available.
The files have been redacted to exclude confidential information.
DOI: 10.5281/zenodo.10013262
title: ES11 - Social housing - Simancas (Spain)

description: Data files for building: ES11 - Social housing - Simancas (Spain)
Languages: Spanish, English
These files are part of the public benchmark repository created as a part of the crossCert EU project. 
This repository contains curated building data, certificate results and, where available, measured performance results. The repository is publicly available so that it can be used as a testbench for new Energy Performance Certificate (EPC) procedures.
The files are organised in the following folders  (note that not all files are always provided):

Main data  and Results, with:

Neutral data inventory.
Neutral results report.
Original EPC certificate.
Energy Consumption Data, with:

Files, where available, with energy consumption data for the building, which can be used for validation of models and EPC results.
Drawings

Building drawings which can be used as an aid for generating the EPC, or for creating dynamic energy consumption  models.
Other Data

Any other data that can be useful for the purposes of creating or validating an EPC or an energy consumption dynamic model for the building.
Dynamic Model

Data to run a dynamic model of the building, if available.
The files have been redacted to exclude confidential information.
DOI: 10.6084/m9.figshare.24316969
title: Supplementary Material for: Long-term Follow-up of Unilateral Deep Brain Stimulation targeting the caudal Zona Incerta in 13 patients with Parkinsonian Tremor

description: Introduction: Deep brain stimulation (DBS) is an established treatment for Parkinson’s disease (PD) and other movement disorders. The ventral intermediate nucleus of the thalamus (Vim) is considered as the target of choice for tremor disorders, including tremor-dominant PD not suitable for DBS in the subthalamic nucleus (STN). In the last decade, several studies have shown promising results on tremor from DBS in the posterior subthalamic area (PSA), including the caudal zona incerta (cZi) located postero-medial to the STN. The aim of this study was to evaluate the long-term effect of unilateral cZi/PSA-DBS in patients with tremor-dominant Parkinson’s disease. Methods: Thirteen patients with PD with medically refractory tremor were included. The patients were evaluated using the motor part of the Unified Parkinson Disease Rating Scale (UPDRS) off/on medication before surgery and off/on medication and stimulation 1-2 years (short-term) after surgery and at a minimum of 3 years after surgery (long-term). Results: At short-term follow-up DBS improved contralateral tremor by 88% in the off-medication state. This improvement persisted after a mean of 62 months. Contralateral bradykinesia was improved by 40% at short-term and 20% at long-term follow-up and the total UPDRS-III by 33% at short-term and by 22% at long-term follow-up with stimulation alone. Conclusions: Unilateral cZi/PSA-DBS seems to remain an effective treatment for patients with severe Parkinsonian tremor several years after surgery. There was also a modest improvement on bradykinesia.
DOI: 10.6084/m9.figshare.24316969.v1
title: Supplementary Material for: Long-term Follow-up of Unilateral Deep Brain Stimulation targeting the caudal Zona Incerta in 13 patients with Parkinsonian Tremor

description: Introduction: Deep brain stimulation (DBS) is an established treatment for Parkinson’s disease (PD) and other movement disorders. The ventral intermediate nucleus of the thalamus (Vim) is considered as the target of choice for tremor disorders, including tremor-dominant PD not suitable for DBS in the subthalamic nucleus (STN). In the last decade, several studies have shown promising results on tremor from DBS in the posterior subthalamic area (PSA), including the caudal zona incerta (cZi) located postero-medial to the STN. The aim of this study was to evaluate the long-term effect of unilateral cZi/PSA-DBS in patients with tremor-dominant Parkinson’s disease. Methods: Thirteen patients with PD with medically refractory tremor were included. The patients were evaluated using the motor part of the Unified Parkinson Disease Rating Scale (UPDRS) off/on medication before surgery and off/on medication and stimulation 1-2 years (short-term) after surgery and at a minimum of 3 years after surgery (long-term). Results: At short-term follow-up DBS improved contralateral tremor by 88% in the off-medication state. This improvement persisted after a mean of 62 months. Contralateral bradykinesia was improved by 40% at short-term and 20% at long-term follow-up and the total UPDRS-III by 33% at short-term and by 22% at long-term follow-up with stimulation alone. Conclusions: Unilateral cZi/PSA-DBS seems to remain an effective treatment for patients with severe Parkinsonian tremor several years after surgery. There was also a modest improvement on bradykinesia.
DOI: 10.5281/zenodo.10039789
title: Data for "Optimizing for an arbitrary Schrödinger cat state"

description: We derive a set of functionals for optimization towards an arbitrary cat state and demonstrate their application by optimizing the dynamics of a Kerr-nonlinear Hamiltonian with two-photon driving. The versatility of our framework allows us to adapt our functional towards optimization of maximally entangled cat states, applying it to a Jaynes-Cummings model. We identify the strategy of the obtained control fields and determine the quantum speed limit as a function of the cat state's excitation. Finally, we extend our optimization functionals to open quantum system dynamics and apply it to the Jaynes-Cummings model with decay on the oscillator. For strong dissipation and large cat radii, we find a change in the control strategy compared to the case without dissipation. Our results highlight the power of optimal control with functionals specifically crafted for complex physical tasks and the versatility of the quantum optimal control toolbox for practical applications in the quantum technologies.
DOI: 10.5281/zenodo.10039788
title: Data for "Optimizing for an arbitrary Schrödinger cat state"

description: We derive a set of functionals for optimization towards an arbitrary cat state and demonstrate their application by optimizing the dynamics of a Kerr-nonlinear Hamiltonian with two-photon driving. The versatility of our framework allows us to adapt our functional towards optimization of maximally entangled cat states, applying it to a Jaynes-Cummings model. We identify the strategy of the obtained control fields and determine the quantum speed limit as a function of the cat state's excitation. Finally, we extend our optimization functionals to open quantum system dynamics and apply it to the Jaynes-Cummings model with decay on the oscillator. For strong dissipation and large cat radii, we find a change in the control strategy compared to the case without dissipation. Our results highlight the power of optimal control with functionals specifically crafted for complex physical tasks and the versatility of the quantum optimal control toolbox for practical applications in the quantum technologies.
DOI: 10.5281/zenodo.10013301
title: ES12 - Social Housing - Candeleda (Spain)

description: Data files for building: ES12 - Social Housing - Candeleda (Spain)
Languages: Spanish, English
These files are part of the public benchmark repository created as a part of the crossCert EU project. 
This repository contains curated building data, certificate results and, where available, measured performance results. The repository is publicly available so that it can be used as a testbench for new Energy Performance Certificate (EPC) procedures.
The files are organised in the following folders  (note that not all files are always provided):

Main data  and Results, with:

Neutral data inventory.
Neutral results report.
Original EPC certificate.
Energy Consumption Data, with:

Files, where available, with energy consumption data for the building, which can be used for validation of models and EPC results.
Drawings

Building drawings which can be used as an aid for generating the EPC, or for creating dynamic energy consumption  models.
Other Data

Any other data that can be useful for the purposes of creating or validating an EPC or an energy consumption dynamic model for the building.
Dynamic Model

Data to run a dynamic model of the building, if available.
The files have been redacted to exclude confidential information.
DOI: 10.5281/zenodo.10013300
title: ES12 - Social Housing - Candeleda (Spain)

description: Data files for building: ES12 - Social Housing - Candeleda (Spain)
Languages: Spanish, English
These files are part of the public benchmark repository created as a part of the crossCert EU project. 
This repository contains curated building data, certificate results and, where available, measured performance results. The repository is publicly available so that it can be used as a testbench for new Energy Performance Certificate (EPC) procedures.
The files are organised in the following folders  (note that not all files are always provided):

Main data  and Results, with:

Neutral data inventory.
Neutral results report.
Original EPC certificate.
Energy Consumption Data, with:

Files, where available, with energy consumption data for the building, which can be used for validation of models and EPC results.
Drawings

Building drawings which can be used as an aid for generating the EPC, or for creating dynamic energy consumption  models.
Other Data

Any other data that can be useful for the purposes of creating or validating an EPC or an energy consumption dynamic model for the building.
Dynamic Model

Data to run a dynamic model of the building, if available.
The files have been redacted to exclude confidential information.
DOI: 10.5281/zenodo.10039807
title: Govella et al-Transfluthrin emanators evaluation data sets
DOI: 10.17037/data.00001789
title: Results from a before-and-after learning assessment of pre-migration departure training for prospective female migrants in Odisha, India

description: Work in Freedom (WiF) was a large multi-component intervention managed by the International Labour Organization (ILO) and funded by the Department for International Development (DFID), to prevent labour trafficking. WiF was implemented in India, Nepal and Bangladesh as source countries, and Lebanon and Jordan as destination countries, from 2013 to 2018. WiF’s community-based activities aimed to prevent labour trafficking by enhancing women’s autonomy, fostering adoption of ‘safe migration’ practices and assertion of migrant workers’ rights. The India component of WiF focussed on prospective in-country migrants only. A two-day pre-migration training event was organised for women who expressed an interest in migrating for work during WIF direct outreach sessions. The purpose of the sessions was to help women to make informed decisions about whether, and how, to migrate for work. They included modules on self-care, financial literacy, use of technology to ensure wellbeing, and safety in transit and at destination. Sessions were organised at the Gram Panchayat (village assembly) level and held once approximately 30 women had signed up per session (multiple sessions were held with different groups of approximately 30 women). The training was implemented by the Self Employed Women’s Association (SEWA) and AAINA, local NGOs with experience in gender, and labour mobilisation and organisation among women. This dataset contains data provided by 347 women who participated in pre-migration training and completed pre-training and post-training interviews. Dataset variables are listed in the accompanying questionnaire.
description: NP cleaned and analysed data collected as part of the WiF evaluation by former LSHTM staff.
DOI: 10.5281/zenodo.3904539
title: A salivary chitinase of Varroa destructor regulates mite-honey bee interactions

description: This dataset represents raw data and metadata underlying the findings (and the figures) reported in the manuscript "A salivary chitinase of Varroa destructor regulates mite-honey bee interactions". <strong>Fig 2A.</strong> Relative expression data of 3 selected candidates are presented as mean fold changes of 3-4 independent biological replicates. Each replicate consisted of a pool of 5-10 mites, from which the RNA was extracted from, salivary glands (SG), and from the rest of the whole body, deprived of salivary glands (Whole Body – SG). Values on Y-axis are reported in Log<sub>10</sub> scale. Error bars represent standard error of the mean. Statistically significant differences are denoted with an asterisk (P &lt; 0.005). <strong>Fig 4.</strong> <strong>Survival of <em>V. destructor</em> as affected by RNAi-mediated silencing of the gene encoding VdCHIsal. </strong>(A) Relative expression of <em>Vd-CHIsal</em> after soaking in a dsRNA solution. qRT-PCR data are presented as mean fold changes of 2-6 independent biological replicates. Each replicate consisted in a pool of 2-3 mites. Each time point was separately analyzed and the control sample was used as calibrator. Mean values within each time point were compared by Student’s t-test. Error bars represent the standard error of the mean. Mean values denoted with asterisks are significantly different (*p&lt;0.05; ** p&lt;0.01). (B) Kaplan-Meier survival curves of mites soaked in a solution of dsRNA targeting <em>Vd-CHIsal</em>. Host pupae were maintained throughout the feeding or replaced every 24 h. Error bars represent the standard error of the mean. <strong>Fig 5.</strong> <strong>Differentially expressed genes in honey bee pupae artificially infested with mites delivering saliva with the full repertoire of proteins or lacking Vd-CHIsal.</strong> (A) Differential expression of 13 honey bee genes, as affected by presence of Vd-CHIsal in the saliva (KD/WS). DESeq2 adjusted <em>P</em> was &lt; 0.05 and FDR was set at 5%. Log transformed mean FPKM values are reported on Y axis. Error bars represent SEM. Summary tables of differential expression analysis are presented in S2 and S3 Tables. (B) Relative expression of immune-related genes in honey bee pupae as affected by Vd-CHIsal expression in <em>Varroa destructor</em> infesting mites. Results of qRT-PCR are presented as mean fold changes relative to non-infested pupae used as calibrator. Values on Y axis are reported in Log<sub>10</sub> scale. Error bars represent the standard error of the mean. Mean values were compared by one-way ANOVA, followed by Tukey post-hoc test, and values statistically different denoted with different letters (P&lt;0.05). Detailed results of statistical analyses are presented in S4 Table. NP: non-parasitized controls; WS: pupae infested with mites soaked in saline solution; KD: pupae infested with mites soaked in <em>Vd-CHIsal</em> dsRNA solution.
DOI: 10.15129/d40aa95f-cd9a-47e2-abd4-a08381668b47
title: Data For "A Robust Machine Learning Approach for the Prediction of Allosteric Binding Sites"

description: This dataset contains the appendices to the thesis "A Robust Machine Learning Approach for the Prediction of Allosteric Binding Sites." Contents include both raw and processed data presented in Excel or text formats, as well as PyMOL session files. Full details of each appendix are provided in the README file. Data embargo on thesis data until 28/03/2019. Moratorium extended until 28/3/22
DOI: 10.5287/bodleian:rbaypamy7
title: Supporting Data for The Cycladic Blueschist Unit on Tinos, Greece: Cold NE Subduction and SW-Directed Extrusion of the Cycladic Continental Margin under the Tsiknias Ophiolite
DOI: 10.5281/zenodo.3904587
title: Testdata for ABR Thresholder

description: Anonymized ABR data.
DOI: 10.5281/zenodo.3904586
title: Testdata for ABR Thresholder

description: Anonymized ABR data.
DOI: 10.5519/qd.hib9vi4r
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (12 records)
DOI: 10.26300/xfkz-pg54
title: Interventions for Drug Use – Supplemental Report: A Systematic Review for the U.S. Preventive Services Task Force
DOI: 10.5281/zenodo.3904576
title: resting ns2

description: resting ns2
DOI: 10.5281/zenodo.3904575
title: resting ns2

description: resting ns2
DOI: 10.5281/zenodo.3904280
title: FETAL_PLANES_DB: Common maternal-fetal ultrasound images

description: A large dataset of routinely acquired maternal-fetal screening ultrasound images collected from two different hospitals by several operators and ultrasound machines. All images were manually labeled by an expert maternal fetal clinician. Images are divided into 6 classes: four of the most widely used fetal anatomical planes (Abdomen, Brain, Femur and Thorax), the mother’s cervix (widely used for prematurity screening) and a general category to include any other less common image plane. Fetal brain images are further categorized into the 3 most common fetal brain planes (Trans-thalamic, Trans-cerebellum, Trans-ventricular) to judge fine grain categorization performance. Meta information (patient number, us machine, operator) is also provided, as well as the training-test split used in the Nature Sci Rep paper.
description: The research leading to these results has received funding from Transmural Biotech SL, "LaCaixa" Foundation under grant agreements LCF/PR/GN14/10270005 and LCF/PR/GN18/10310003 the Instituto de Salud Carlos III (PI16/00861, PI17/00675) within the Plan Nacional de I+D+I and cofinanced by ISCIII-Subdirección General de Evaluación together with the Fondo Europeo de Desarrollo Regional (FEDER) "Una manera de hacer Europa", Cerebra Foundation for the Brain Injured Child (Carmarthen, Wales, UK), Cellex Foundation and AGAUR under grant 2017 SGR nº 1531. Additionally, EE has received funding from the Departament de Salut under grant SLT008/18/00156.
description: {"references": ["Burgos-Artizzu, X.P., et al. Evaluation of deep convolutional neural networks for automatic classification of common maternal fetal ultrasound planes. Sci Rep 10, 10200 (2020). https://doi.org/10.1038/s41598-020-67076-5"]}
DOI: 10.5281/zenodo.3904279
title: FETAL_PLANES_DB: Common maternal-fetal ultrasound images

description: A large dataset of routinely acquired maternal-fetal screening ultrasound images collected from two different hospitals by several operators and ultrasound machines. All images were manually labeled by an expert maternal fetal clinician. Images are divided into 6 classes: four of the most widely used fetal anatomical planes (Abdomen, Brain, Femur and Thorax), the mother’s cervix (widely used for prematurity screening) and a general category to include any other less common image plane. Fetal brain images are further categorized into the 3 most common fetal brain planes (Trans-thalamic, Trans-cerebellum, Trans-ventricular) to judge fine grain categorization performance. Meta information (patient number, us machine, operator) is also provided, as well as the training-test split used in the Nature Sci Rep paper.
description: The research leading to these results has received funding from Transmural Biotech SL, "LaCaixa" Foundation under grant agreements LCF/PR/GN14/10270005 and LCF/PR/GN18/10310003 the Instituto de Salud Carlos III (PI16/00861, PI17/00675) within the Plan Nacional de I+D+I and cofinanced by ISCIII-Subdirección General de Evaluación together with the Fondo Europeo de Desarrollo Regional (FEDER) "Una manera de hacer Europa", Cerebra Foundation for the Brain Injured Child (Carmarthen, Wales, UK), Cellex Foundation and AGAUR under grant 2017 SGR nº 1531. Additionally, EE has received funding from the Departament de Salut under grant SLT008/18/00156.
description: {"references": ["Burgos-Artizzu, X.P., et al. Evaluation of deep convolutional neural networks for automatic classification of common maternal fetal ultrasound planes. Sci Rep 10, 10200 (2020). https://doi.org/10.1038/s41598-020-67076-5"]}