cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.akitr1
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chiloscyllium griseum Müller & Henle, 1838",
 "Country is India"
 ]
}

 The dataset includes 19 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000843-160803222355964/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nrshvy
title: Occurrence Download

description: A dataset containing 1569 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 "License is CC0 1.0",
 "MediaType is one of (Video, Image)",
 "TaxonKey is Alopochen aegyptiaca (Linnaeus, 1766)"
 ]
}

 The dataset includes 1569 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0193996-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wpk4jr
title: Occurrence Download

description: A dataset containing 602 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Saduria entomon (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 602 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020060-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kttaxv
title: Occurrence Download

description: A dataset containing 11769 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Singapore",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 11769 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000843-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hjp65g
title: Occurrence Download

description: A dataset containing 6814 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gardenia jasminoides J.Ellis"
 ]
}

 The dataset includes 6814 records from 244 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0193999-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2jx2r8
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crenicara latruncularium Kullander & Staeck, 1990"
 ]
}

 The dataset includes 24 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100577-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2d8fpm
title: Occurrence Download

description: A dataset containing 6628 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fucus spiralis L."
 ]
}

 The dataset includes 6628 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000843-170925132151566/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.smuwxn
title: Occurrence Download

description: A dataset containing 830 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus deserticola Trel."
 ]
}

 The dataset includes 830 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100586-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zqckbf
title: Occurrence Download

description: A dataset containing 1987 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Crotalus molossus Baird & Girard, 1853"
 ]
}

 The dataset includes 1987 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007656-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5d37mt
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ouratea dorata L.Marinho & Amorim"
 ]
}

 The dataset includes 50 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180295-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ennidr
title: Occurrence Download

description: A dataset containing 8050 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Wasmannia auropunctata (Roger, 1863)"
 ]
}

 The dataset includes 8050 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000843-171107215919691/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xyaber
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Ribes sardoum Martelli",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 27 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020072-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ydn46b
title: Occurrence Download

description: A dataset containing 6203 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gossypium arboreum L."
 ]
}

 The dataset includes 6203 records from 170 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0194003-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5ywcs
title: Occurrence Download

description: A dataset containing 1362 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Phyllotreta striolata (Illiger, 1803)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1362 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000843-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gzn54t
title: Occurrence Download

description: A dataset containing 1394 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Malthodes brevicollis (Paykull, 1798)"
 ]
}

 The dataset includes 1394 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039885-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vzg9jq
title: Occurrence Download

description: A dataset containing 22852 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gossypium hirsutum L."
 ]
}

 The dataset includes 22852 records from 361 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0194019-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/g5hsfj/p9eyov
title: DCE1.dta
DOI: 10.7910/dvn/g5hsfj/uwl32c
title: DCE2.dta
DOI: 10.7910/dvn/vw13ks/ia166d
title: map-nations-Foreign.png
DOI: 10.7910/dvn/vw13ks/jq3k3m
title: map-nations-Hathi-1914-1940.png
DOI: 10.7910/dvn/vw13ks/mtddna
title: map-nations-Hathi-1880-1913.png
DOI: 10.7910/dvn/vw13ks/nv7rgg
title: map-nations-Foreign-1914-1940.png
DOI: 10.7910/dvn/vw13ks/puu55u
title: map-nations-Foreign-1880-1913.png
DOI: 10.7910/dvn/vw13ks/13xbsk
title: map-nations-London-1880-1913.png
DOI: 10.7910/dvn/vw13ks/dchl8d
title: map-nations-Prominent-1880-1913.png
DOI: 10.7910/dvn/vw13ks/juav9z
title: map-nations-London.png
DOI: 10.7910/dvn/vw13ks/m90ew5
title: map-nations-Hathi.png
DOI: 10.7910/dvn/vw13ks/mxrixb
title: map-nations-London-1914-1940.png
DOI: 10.7910/dvn/vw13ks/ybmth2
title: map-nations-Prominent-1914-1940.png
DOI: 10.7910/dvn/vw13ks/5yhnj8
title: map-nations-Prominent.png
DOI: 10.7910/dvn/vw13ks/at6oqp
title: occurs_100k_by_auth_Hathi.tsv
DOI: 10.7910/dvn/vw13ks/ftubju
title: occurs_100k_1914_1940_by_corpus.tsv
DOI: 10.7910/dvn/vw13ks/ojdaje
title: occurs_100k_1880_1913_by_corpus.tsv
DOI: 10.7910/dvn/vw13ks/wvkw5w
title: occurs_100k_by_auth_Foreign.tsv
DOI: 10.7910/dvn/vw13ks/23ijpw
title: occurs_100k_by_auth_London.tsv
DOI: 10.7910/dvn/vw13ks/lgya6o
title: occurs_100k_by_era_Hathi.tsv
DOI: 10.7910/dvn/vw13ks/oraoyd
title: occurs_100k_by_era_Foreign.tsv
DOI: 10.7910/dvn/vw13ks/r3ymwj
title: occurs_100k_by_auth_Prominent.tsv
DOI: 10.7910/dvn/vw13ks/wctmkv
title: occurs_100k_by_auth_Prominent.tsv
DOI: 10.7910/dvn/vw13ks/zitsp8
title: occurs_100k_by_corpus.tsv
DOI: 10.6084/m9.figshare.27274112
title: Additional file 1 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 1:  Table S1. Differential gene expression in Mir96 +13G&gt;A homozygotes. RNA-seq results showing gene expression in Mir96 +13G&gt;A homozygotes as log 2 fold change (log 2 FC) compared to sex-matched wildtype littermates. Genes are ordered by false discovery rate (FDR); unadjusted p values are also shown.
DOI: 10.6084/m9.figshare.27274112.v1
title: Additional file 1 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 1:  Table S1. Differential gene expression in Mir96 +13G&gt;A homozygotes. RNA-seq results showing gene expression in Mir96 +13G&gt;A homozygotes as log 2 fold change (log 2 FC) compared to sex-matched wildtype littermates. Genes are ordered by false discovery rate (FDR); unadjusted p values are also shown.
DOI: 10.6084/m9.figshare.27274115
title: Additional file 2 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 2:  Table S2. Differential gene expression in Mir96 +14C&gt;A homozygotes. RNA-seq results showing gene expression in Mir96 +14C&gt;A homozygotes as log 2 fold change (log 2 FC) compared to sex-matched wildtype littermates. Genes are ordered by false discovery rate (FDR); unadjusted p values are also shown.
DOI: 10.6084/m9.figshare.27274115.v1
title: Additional file 2 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 2:  Table S2. Differential gene expression in Mir96 +14C&gt;A homozygotes. RNA-seq results showing gene expression in Mir96 +14C&gt;A homozygotes as log 2 fold change (log 2 FC) compared to sex-matched wildtype littermates. Genes are ordered by false discovery rate (FDR); unadjusted p values are also shown.
DOI: 10.7910/dvn/vw13ks/1e87wq
title: occurs_100k_by_era_Prominent.tsv
DOI: 10.7910/dvn/vw13ks/eri97z
title: occurs_100k_by_era_London.tsv
DOI: 10.7910/dvn/vw13ks/muph7m
title: occurs_100k_by_ethnicity_in_foreign.tsv
DOI: 10.7910/dvn/vw13ks/o8xouv
title: occurs_100k_gb_by_corpus.tsv
DOI: 10.7910/dvn/vw13ks/pcob5a
title: occurs_100k_by_vol_Prominent.tsv
DOI: 10.7910/dvn/vw13ks/wf8xxn
title: occurs_100k_by_genre_in_foreign.tsv
DOI: 10.6084/m9.figshare.27274121
title: Additional file 4 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 4:  Table S3. 127 genes were significantly differentially expressed in both Mir96 +13G&gt;A and Mir96 +14C&gt;A homozygotes. Eighty-four were upregulated, 40 were downregulated, and 3 were upregulated in Mir96 +14C&gt;A homozygotes and downregulated in Mir96 +13G&gt;A homozygotes. Two hundred and one DEGs were unique to Mir96 +13G&gt;A homozygotes, and 566 DEGs were unique to Mir96 +14C&gt;A homozygotes. Only genes with significant differential expression (FDR &lt; 0.05) are shown.
DOI: 10.6084/m9.figshare.27274121.v1
title: Additional file 4 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 4:  Table S3. 127 genes were significantly differentially expressed in both Mir96 +13G&gt;A and Mir96 +14C&gt;A homozygotes. Eighty-four were upregulated, 40 were downregulated, and 3 were upregulated in Mir96 +14C&gt;A homozygotes and downregulated in Mir96 +13G&gt;A homozygotes. Two hundred and one DEGs were unique to Mir96 +13G&gt;A homozygotes, and 566 DEGs were unique to Mir96 +14C&gt;A homozygotes. Only genes with significant differential expression (FDR &lt; 0.05) are shown.
DOI: 10.6084/m9.figshare.27274124
title: Additional file 5 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 5:  Table S4. Gene sets enriched in up- and downregulated genes in Mir96 +13G&gt;A and Mir96 +14C&gt;A homozygotes. For each gene set, the number of the genes present in the RNA-seq dataset is shown, along with enrichment score (which indicates the degree of overrepresentation of the gene set at the top or the bottom of the list of input genes ranked by differential expression), normalised enrichment score (which accounts for gene set size), p value (significance of enrichment score for the single gene set) and false discovery rate (FDR; the probability that a gene set with that normalised enrichment score represents a false positive finding, corrected for multiple testing and gene set size). Gene sets are ordered by FDR. Two gene sets corresponding to predicted miR-96 targets are enriched in upregulated genes in the Mir96  +  13G  &gt;  A transcriptome, but neither are enriched in the Mir96  +  14C  &gt;  A transcriptome, which means that the genes in those gene sets are relatively evenly distributed through the Mir96  +  14C  &gt;  A RNA-seq gene list when ranked by differential expression. This could be due to the much greater number of significantly misregulated genes in the Mir96 +14C&gt;A transcriptome, which may mask the signal from the loss of the wildtype miR-96 targeting.
DOI: 10.6084/m9.figshare.27274124.v1
title: Additional file 5 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 5:  Table S4. Gene sets enriched in up- and downregulated genes in Mir96 +13G&gt;A and Mir96 +14C&gt;A homozygotes. For each gene set, the number of the genes present in the RNA-seq dataset is shown, along with enrichment score (which indicates the degree of overrepresentation of the gene set at the top or the bottom of the list of input genes ranked by differential expression), normalised enrichment score (which accounts for gene set size), p value (significance of enrichment score for the single gene set) and false discovery rate (FDR; the probability that a gene set with that normalised enrichment score represents a false positive finding, corrected for multiple testing and gene set size). Gene sets are ordered by FDR. Two gene sets corresponding to predicted miR-96 targets are enriched in upregulated genes in the Mir96  +  13G  &gt;  A transcriptome, but neither are enriched in the Mir96  +  14C  &gt;  A transcriptome, which means that the genes in those gene sets are relatively evenly distributed through the Mir96  +  14C  &gt;  A RNA-seq gene list when ranked by differential expression. This could be due to the much greater number of significantly misregulated genes in the Mir96 +14C&gt;A transcriptome, which may mask the signal from the loss of the wildtype miR-96 targeting.
DOI: 10.6084/m9.figshare.27274127
title: Additional file 6 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 6:  Table S5. Significant pathways from Ingenuity Pathway Analysis. The z-score is a measure of the predicted activity (for positive z-scores) or inhibition (for negative z-scores) of the pathway, based on the known misregulation of the differentially expressed genes in that pathway.
DOI: 10.6084/m9.figshare.27274127.v1
title: Additional file 6 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 6:  Table S5. Significant pathways from Ingenuity Pathway Analysis. The z-score is a measure of the predicted activity (for positive z-scores) or inhibition (for negative z-scores) of the pathway, based on the known misregulation of the differentially expressed genes in that pathway.
DOI: 10.7910/dvn/v5lb9k/8v2pin
title: copecrabtreefariss.csv
DOI: 10.7910/dvn/v5lb9k/d3xt7q
title: copecrabtreefariss.r
DOI: 10.7910/dvn/v5lb9k/hfivdo
title: dm_ctry.png
DOI: 10.7910/dvn/v5lb9k/jfkhvj
title: assn_ctry.png
DOI: 10.7910/dvn/v5lb9k/r4wamy
title: countrycor.png
DOI: 10.7910/dvn/vw13ks/a3dgkl
title: pub_date_mean_by_corpus.tsv
DOI: 10.7910/dvn/vw13ks/e0moon
title: pub_date_mean_occurrence_weighted_by_corpus.tsv
DOI: 10.7910/dvn/vw13ks/n3gctp
title: spec_gb_subcity_by_auth_Prominent.tsv
DOI: 10.7910/dvn/vw13ks/yqfock
title: occurs_100k_london_by_corpus.tsv
DOI: 10.7910/dvn/vw13ks/z0gago
title: spec_gb_subcity_by_vol_Prominent.tsv
DOI: 10.7910/dvn/vw13ks/zl7ke7
title: README.md
DOI: 10.6084/m9.figshare.27274130
title: Additional file 7 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 7:  Table S6. Candidate direct targets identified from the transcriptomes of four Mir96 mutant mice using three different methods.
DOI: 10.6084/m9.figshare.27274130.v1
title: Additional file 7 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 7:  Table S6. Candidate direct targets identified from the transcriptomes of four Mir96 mutant mice using three different methods.
DOI: 10.6084/m9.figshare.27274133
title: Additional file 8 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 8:  Table S7. Gene sets enriched in up- and downregulated genes in Mir96 Dmdo and Mir183/96 dko homozygotes. For each gene set, the number of the misregulated genes from the RNA-seq analysis is shown, along with enrichment score (based on the number of misregulated genes in the gene set, the total number of misregulated genes and the overall gene set size), normalised enrichment score (which accounts for gene set size), p value (significance of enrichment score for the single gene set) and false discovery rate (FDR; the probability that a gene set with that normalised enrichment score represents a false positive finding, corrected for multiple testing and gene set size). Gene sets are ordered by FDR. Transcriptome data are from [4] and [12].
DOI: 10.6084/m9.figshare.27274133.v1
title: Additional file 8 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 8:  Table S7. Gene sets enriched in up- and downregulated genes in Mir96 Dmdo and Mir183/96 dko homozygotes. For each gene set, the number of the misregulated genes from the RNA-seq analysis is shown, along with enrichment score (based on the number of misregulated genes in the gene set, the total number of misregulated genes and the overall gene set size), normalised enrichment score (which accounts for gene set size), p value (significance of enrichment score for the single gene set) and false discovery rate (FDR; the probability that a gene set with that normalised enrichment score represents a false positive finding, corrected for multiple testing and gene set size). Gene sets are ordered by FDR. Transcriptome data are from [4] and [12].
DOI: 10.6084/m9.figshare.27274136
title: Additional file 9 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 9:  Table S8. Input and output from the SPIED tool. The transcriptomes from Mir96 +13G&gt;A and Mir96 +14C&gt;A homozygotes were combined by excluding genes misregulated in opposite directions. The resulting list, used as input for SPIED, is shown on the left sub-table. The SPIED output for this list is shown in the middle sub-table, and the SPIED output for the Mir183/96 dko transcriptome alone [12] is shown in the right sub-table. Output columns show the compound, tissue and stage of each correlated or anti-correlated DrugMatrix expression profile, the correlation score of the input transcriptome data with that DrugMatrix expression profile, the z-score of that correlation (the highest z-score is the best-correlated profile) and the number of genes from the input transcriptome present in the DrugMatrix expression profile.
DOI: 10.6084/m9.figshare.27274139.v1
title: Additional file 10 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 10:  Data S1. Data underlying the graphs and charts presented in this study.
DOI: 10.7910/dvn/v5lb9k/bo9xea
title: results.txt
DOI: 10.7910/dvn/v5lb9k/f7unlg
title: yearcor.png
DOI: 10.7910/dvn/v5lb9k/hbhu98
title: fm_ctry.png
DOI: 10.7910/dvn/v5lb9k/kdf2ub
title: religion_ctry.png
DOI: 10.7910/dvn/v5lb9k/maknig
title: torture_ctry.png
DOI: 10.7910/dvn/v5lb9k/ro6gga
title: kill_ctry.png
DOI: 10.7910/dvn/vw13ks/9ml3yx
title: spec_nongb_subcountry_by_vol_Prominent.tsv
DOI: 10.7910/dvn/vw13ks/cqbn1e
title: spec_nongb_subcountry_by_auth_Prominent.tsv
DOI: 10.7910/dvn/vw13ks/mzu0or
title: spec_nongb_subcountry_by_auth_London.tsv
DOI: 10.7910/dvn/vw13ks/tzos28
title: spec_nongb_subcountry_by_auth_Prominent.tsv
DOI: 10.7910/dvn/vw13ks/wna5dj
title: spec_nongb_subcountry_by_auth_Hathi.tsv
DOI: 10.7910/dvn/vw13ks/xisyr2
title: spec_nongb_subcountry_by_auth_Foreign.tsv
DOI: 10.6084/m9.figshare.27274136.v1
title: Additional file 9 of Pathological mechanisms and candidate therapeutic approaches in the hearing loss of mice carrying human MIR96 mutations

description: Additional file 9:  Table S8. Input and output from the SPIED tool. The transcriptomes from Mir96 +13G&gt;A and Mir96 +14C&gt;A homozygotes were combined by excluding genes misregulated in opposite directions. The resulting list, used as input for SPIED, is shown on the left sub-table. The SPIED output for this list is shown in the middle sub-table, and the SPIED output for the Mir183/96 dko transcriptome alone [12] is shown in the right sub-table. Output columns show the compound, tissue and stage of each correlated or anti-correlated DrugMatrix expression profile, the correlation score of the input transcriptome data with that DrugMatrix expression profile, the z-score of that correlation (the highest z-score is the best-correlated profile) and the number of genes from the input transcriptome present in the DrugMatrix expression profile.