cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.bnu6he
title: Occurrence Download

description: A dataset containing 9150 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Scytodes thoracica (Latreille, 1802))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9150 records from 203 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025332-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/wvdxt4r9yw.1
title: A case report of de novo immune thrombocytopenic purpura (ITP) following COVID-19-mRNA vaccination: 2-year clinical follow up.

description: After vaccination with mRNA vaccines, several cases of autoimmune diseases have been reported. We presented a case report of an adult male patient, without any previous report of thrombocytopenia or other hematologic disorders, who developed a chronic paucisymptomatic or mild ITP secondary to SARS-CoV-2 m-RNA vaccine. The patient received the first and second doses of mRNA BNT162b2 vaccine (June/2021), the first booster dose of mRNA-1273 (November/2021), and the second booster dose of mRNA BNT162b2 (June/2022). Thrombocytopenia was documented after each vaccination. After corticoids therapy was implemented, the patient improved. However, cycling thrombocytopenia was documented until August/2023 (mean: 103 x109 platelets/L).
DOI: 10.17632/wvdxt4r9yw.2
title: A case report of de novo immune thrombocytopenic purpura (ITP) following COVID-19-mRNA vaccination: 2-year clinical follow up.

description: After vaccination with mRNA vaccines, several cases of autoimmune diseases have been reported. We presented a case report of an adult male patient, without any previous report of thrombocytopenia or other hematologic disorders, who developed a chronic paucisymptomatic or mild ITP secondary to SARS-CoV-2 m-RNA vaccine. The patient received the first and second doses of mRNA BNT162b2 vaccine (June/2021), the first booster dose of mRNA-1273 (November/2021), and the second booster dose of mRNA BNT162b2 (June/2022). Thrombocytopenia was documented after each vaccination. After corticoids therapy was implemented, the patient improved. However, cycling thrombocytopenia was documented until August/2023 (mean: 103 x109 platelets/L). Version 2 of the file includes results from a blood count in 2017, which shows that the patient did not have platelet counts less than 100x109 platelets/L, as well as results from other blood counts performed after vaccinations until May 2024.
DOI: 10.17632/bwcf2hnn8m.1
title: Optimizing Alteration Mineral Detection: A Fusion of Multispectral and Hyperspectral Remote Sensing Techniques in the Sar-e-Chah-e Shur, Iran, data set

description: This database is associated with the research article titled 'Optimizing Alteration Mineral Detection: A Fusion of Multispectral and Hyperspectral Remote Sensing Techniques in Sar-e-Chah-e Shur, Iran.' It comprises primary data from Aster, Landsat 8, and Sentinel 2 satellites, alongside processed outputs from HyMap and Hyperion sensors. Additionally, it incorporates findings from ICP-OES analysis of stream sediments.
DOI: 10.17632/jfpzyxchjb.1
title: Dawwen

description: These data is used for usability testing of Dawwen: An Arabic Mental Health Mobile App Based on Natural Language Processing
DOI: 10.15468/dl.ek4m7f
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cathartus quadricollis (Guérin-Méneville, 1844))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 61 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025334-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gnste8
title: Occurrence Download

description: A dataset containing 187 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Juglans neotropica Diels",
 "Year 2010-2024"
 ]
}

 The dataset includes 187 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025335-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/z6rwf28682.1
title: Benchmark for Euclidean Single-Depot Bounded Multiple Travelling Salesman Problem instances

description: This repository introduces 168 novel instances (file: instances-168.csv) designed for solving the Euclidean Single-Depot Bounded Multiple Traveling Salesman Problem (Bounded MTSP). These instances are adapted from the TSP library, with city '1' designated as the depot, and the remaining 'n-1' cities representing destinations to be visited by 'k' salespeople. To define the tour constraints, we establish $m_{\min}$ (minimum) and $m_{\max}$ (maximum) values, informed by real-world surveys reflecting client visits ranging from 15 to 60. Our repository provides three sets of $m_{\min}$ and $m_{\max}$ pairs: 30, 50; 24, 40; and 18, 30. Additionally, the value for 'k' is calculated using the formula: $$k=\lceil \frac{1.3 \times n}{m_{\max}} \rceil$$. In addition to the 168 new instances, we have included 6 instances proposed by (Junjie & Dingwei, 2006) (file instances-6.csv)and 16 instances proposed by (Necula et al. 2015) (instances-16.csv), bringing the total to 190 instances. For each instance, we provide the best solution delivered by our 3-phase algorithm (folders: solutions-22 and solutions-163) and their corresponding solution graph (folder: graphs), along with a table detailing the minimum, average, and maximum costs, as well as the average processing time (file: results.xlsx). These instances serve as valuable benchmarks for researchers exploring MTSP variants. R. Necula, M. Breaban, and M. Raschip, ``Performance evaluation of ant colony systems for the single-depot multiple traveling salesman problem,'' In International Conference on Hybrid Artificial Intelligence Systems, Springer, Cham. pp. 257--268, 2015. Available: https://doi.org/10.1007/978-3-319-19644-2\_22 P. Junjie and W. Dingwei, ``An ant colony optimization algorithm for multiple travelling salesman problem,'' In First International Conference on Innovative Computing, Information and Control-Volume I (ICICIC'06), Vol. 1, pp. 210--213, IEEE, 2006 Available: https://doi.org/10.1109/ICICIC.2006.40 TSPLIB Available: http://comopt.ifi.uni-heidelberg.de/software/TSPLIB95/tsp/ Last consulted 30 sep 2023
DOI: 10.17632/z6rwf28682.2
title: Benchmark for Euclidean Single-Depot Bounded Multiple Travelling Salesman Problem instances

description: This repository introduces 168 novel instances (file: instances-168.csv) designed for solving the Euclidean Single-Depot Bounded Multiple Traveling Salesman Problem (Bounded MTSP). These instances are adapted from the TSP library, with city '1' designated as the depot, and the remaining 'n-1' cities representing destinations to be visited by 'k' salespeople. To define the tour constraints, we establish 'm_{\min}' (minimum) and 'm_{\max}' (maximum) bounded values, informed by real-world surveys reflecting client visits ranging from 15 to 60. Our repository provides three sets of 'm_{\min}' and 'm_{\max}' pairs: 30, 50; 24, 40; and 18, 30. Additionally, the value for 'k' is calculated using the formula: $$k= \left \lceil \frac{1.3 \times |V|}{m_{\max}} \right \rceil$$. In addition to the 168 new instances, we have included 6 instances proposed by (Junjie & Dingwei, 2006) (file instances-6.csv)and 16 instances proposed by (Necula et al. 2015) (instances-16.csv), bringing the total to 190 instances. For each instance, we provide the best solution delivered by our 3-phase algorithm (Pacheco-Valencia et al., 2023, folder: code) in (folders: solutions-22 and solutions-163) and their corresponding solution graph (folder: graphs), along with a table detailing the minimum, average, and maximum costs, as well as the average processing time (file: results.xlsx). These instances serve as valuable benchmarks for researchers exploring MTSP variants. R. Necula, M. Breaban, and M. Raschip, ``Performance evaluation of ant colony systems for the single-depot multiple traveling salesman problem,'' In International Conference on Hybrid Artificial Intelligence Systems, Springer, Cham. pp. 257--268, 2015. Available: https://doi.org/10.1007/978-3-319-19644-2\_22 P. Junjie and W. Dingwei, ``An ant colony optimization algorithm for multiple travelling salesman problem,'' In First International Conference on Innovative Computing, Information and Control-Volume I (ICICIC'06), Vol. 1, pp. 210--213, IEEE, 2006 Available: https://doi.org/10.1109/ICICIC.2006.40 V. H. Pacheco-Valencia, N. Vakhania and J. A. Hernández-Aguilar, "An Algorithm to Solve the Euclidean Single-Depot Bounded Multiple Traveling Salesman Problem," In 2023 IEEE World Conference on Applied Intelligence and Computing (AIC), Sonbhadra, India, 2023, pp. 7-12, Available: https://doi.org/10.1109/AIC57670.2023.10263920. TSPLIB Available: http://comopt.ifi.uni-heidelberg.de/software/TSPLIB95/tsp/ Last consulted 30 sep 2023
DOI: 10.17632/p5xtp5hv38.1
title: Impact of Processing Methods on the Distribution of Mineral Elements in Goat Milk Fractions

description: Supplementary files of the artile of "Impact of Processing Methods on the Distribution of Mineral Elements in Goat Milk Fractions".
DOI: 10.17632/kdzkk89y5w.1
title: A Quantitative Polymerase Chain Reaction Protocol for Sex Identification of Zebra Finch Embryos Using Blood Samples

description: The CSV filed attached has qPCR DNA Absorbance (A260/280 ratios) and DNA Yield (ng/µL) data from E13 zebra finch embryo's trunk blood.
DOI: 10.17632/kdzkk89y5w.2
title: A Quantitative Polymerase Chain Reaction Protocol for Sex Identification of Zebra Finch Embryos Using Blood Samples

description: The CSV filed attached has qPCR DNA Absorbance (A260/280 ratios) and DNA Yield (ng/µL) data from E13 zebra finch embryo's trunk blood.
DOI: 10.17632/kdzkk89y5w.3
title: A Quantitative Polymerase Chain Reaction Protocol for Sex Identification of Zebra Finch Embryos Using Blood Samples

description: The CSV filed attached has qPCR DNA Absorbance (A260/280 ratios) and DNA Yield (ng/µL) data from E13 zebra finch embryo's trunk blood.
DOI: 10.15468/dl.g7g7yu
title: Occurrence Download

description: A dataset containing 708 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Scytodes fusca Walckenaer, 1837)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 708 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025336-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5v3jg
title: Occurrence Download

description: A dataset containing 1486 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ahasverus advena (Walt, 1832))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1486 records from 147 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025337-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.en72ej
title: Occurrence Download

description: A dataset containing 315 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Scytodes univittata Simon, 1882)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 315 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025338-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9twv82
title: Occurrence Download

description: A dataset containing 522 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Oryzaephilus mercator (Fauvel, 1889))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 522 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025339-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q42kb9
title: Occurrence Download

description: A dataset containing 10309 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Philodromus dispar Walckenaer, 1826)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10309 records from 290 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025340-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cagmqr
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Oryzaephilus acuminatus Halstead, 1980)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025341-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/dhde-sk18
title: Virtual Slack Bus Newton-Raphson Power Flow (VSB-NRPF) Algorithm for Droop-controlled MVDC Distribution Systems

description: This letter proposes a virtual slack bus Newton-Raphson power flow (VSB-NRPF) algorithm serving for the PF analysis of droop-controlled medium-voltage direct current (MVDC) systems operating in islanded mode without a slack bus. In the proposed algorithm, one of the original power, current, power/voltage and current/voltage buses is assumed to be a virtual slack bus with an initial rated dc voltage, the value of which is corrected based on the actual PF balance equation at the original bus. The accurate voltage value at the virtual slack bus can be derived with fewer iterations by a novel binary search method with Lagrange interpolation. Simulations conducted in RSCAD using an MVDC test system with six dc buses validate the effectiveness of the proposed VSB-NRPF algorithm.
DOI: 10.15468/dl.8xvymd
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Meriola arcifera (Simon, 1886))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 101 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025343-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.88hkf4
title: Occurrence Download

description: A dataset containing 1550 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Oryzaephilus surinamensis (Linnaeus, 1758))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1550 records from 131 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025342-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/8yg88x7rdk.2
title: Comparative analysis of RNA 3D structure prediction methods: towards enhanced modeling of RNA-Ligand interactions

description: This dataset accompanies the publication "Comparative Analysis of RNA 3D Structure Prediction Methods: Towards Enhanced Modeling of RNA-Ligand Interactions." Our study's primary objective was to evaluate the accuracy of various methods in modeling RNA structures, with a particular focus on RNA-small molecule complexes and ligand-binding sites.

We scrutinized the performance of six RNA 3D structure prediction programs—DeepFoldRNA, RhoFold, BRiQ, FARFAR2, SimRNA, and Vfold2—using RNA sequences as a standard input across all methods. Methods like FARFAR2, SimRNA, and Vfold2 were examined both with and without the inclusion of secondary structure information. Notably, BRiQ requires secondary structure restraints for its operation and was, therefore, only run under these conditions. The dataset is meticulously organized into sub-directories named according to each method. For SimRNA, FARFAR2, and Vfold2, directories without secondary structure input maintain the method's name, whereas runs that included secondary structure information are denoted with an '_ss' suffix (e.g., SimRNA_ss).

For instances where secondary structures were utilized, we employed ideal secondary structures derived from the reference structure, extracted using the x3dna-dssr program v1.9.10. All secondary structures were subject to manual inspection and refinement to address any anomalies introduced by x3dna-dssr, ensuring the highest fidelity in our modeling efforts.
DOI: 10.17632/8yg88x7rdk.3
title: Comparative analysis of RNA 3D structure prediction methods: towards enhanced modeling of RNA-Ligand interactions

description: This dataset accompanies the publication "Comparative Analysis of RNA 3D Structure Prediction Methods: Towards Enhanced Modeling of RNA-Ligand Interactions." Our study's primary objective was to evaluate the accuracy of various methods in modeling RNA structures, with a particular focus on RNA-small molecule complexes and ligand-binding sites.

We scrutinized the performance of six RNA 3D structure prediction programs—DeepFoldRNA, RhoFold, BRiQ, FARFAR2, SimRNA, and Vfold2—using RNA sequences as a standard input across all methods. Methods like FARFAR2, SimRNA, and Vfold2 were examined both with and without the inclusion of secondary structure information. Notably, BRiQ requires secondary structure restraints for its operation and was, therefore, only run under these conditions. The dataset is meticulously organized into sub-directories named according to each method. For SimRNA, FARFAR2, and Vfold2, directories without secondary structure input maintain the method's name, whereas runs that included secondary structure information are denoted with an '_ss' suffix (e.g., SimRNA_ss).

For instances where secondary structures were utilized, we employed ideal secondary structures derived from the reference structure, extracted using the x3dna-dssr program v1.9.10. All secondary structures were subject to manual inspection and refinement to address any anomalies introduced by x3dna-dssr, ensuring the highest fidelity in our modeling efforts.

During the final stages of preparing this publication, AlphaFold 3 was released. To benchmark the performance of all ML-based methods (AlphaFold 3, DeepFoldRNA, and RhoFold), we developed two new datasets: Blind set 1 (B1) and Blind set 2 (B2) (see Supplementary Table S2).
DOI: 10.17632/9ht4v974gv.1
title: Fungal spore air pollution in selected environments in Nairobi, Kenya

description: Data emanating from a study that was carried out in selected parts of Nairobi to establish the load, distribution and the type of fungal groups from the atmosphere
DOI: 10.15468/dl.zfkw4q
title: Occurrence Download

description: A dataset containing 3527 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Segestria florentina (Rossi, 1790))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3527 records from 170 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025345-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4g4q69
title: Occurrence Download

description: A dataset containing 10446 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alouatta palliata (Gray, 1849)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 10446 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023666-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d2n9mt
title: Occurrence Download

description: A dataset containing 177 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Betula microphylla Bunge"
 ]
}

 The dataset includes 177 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021228-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kvk44f
title: Occurrence Download

description: A dataset containing 13621 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((3.86719 -38.82259,40.3418 -34.01624,44.64844 2.81137,3.86719 2.81137,3.86719 -38.82259))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Hirundo smithii Leach & K.D.Koenig, 1818",
 "Year 2010-2021"
 ]
}

 The dataset includes 13621 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0163369-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x98z8h
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calamus quangngaiensis A.J.Hend. & N.Q.Dung"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080437-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kcsr1s
title: Occurrence Download

description: A dataset containing 5354 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Vespula germanica (Fabricius, 1793)"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5354 records from 152 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021228-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6ywd8x
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carex purpurifera Mack.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 24 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174950-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.noppho
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Côte d’Ivoire",
 "TaxonKey is Senna tuhovalyana (Aké Assi) Lock"
 ]
}

 The dataset includes 38 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021228-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.