cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14535998
title: Lex Atlas Covid-19 Federalism Dataset
DOI: 10.5281/zenodo.14259133
title: Data and codes used in Peltola et al. "Towards an enhanced metric for detecting vertical flow decoupling in eddy covariance flux observations"

description: These codes and data can be used to reproduce the results presented in Peltola et al. (2025): "Towards an enhanced metric for detecting vertical flow decoupling in eddy covariance flux observations" submitted to Agricultural and Forest Meteorology.

Codes

Installation

The codes have been run under Windows OS with Python 3.11.6. Install the required Python packages by running pip install -r requirements.txt

Usage

Reproducing figuresYou can reproduce the figures shown in the manuscript by downloading the data from this Zenodo repository and then by runningpython plot_figures.py

Note that the data needs to be located in subfolder `data/`.Processing dataThe data files included in this Zenodo repository can be recreated by downloading data from NEON data portal and ICOS carbon portal, see DOI for each dataset in the manuscript, in addition to NEON PAI data from GBOV website (https://gbov.land.copernicus.eu/dataaccessRM/) and then by running

python process_data.py

Note that `.env` file is needed, there the location of each dataset on the computer should be described.Example Omega calculationFor calculating Omega decoupling parameter for a few example cases, you can run

python example_omega_calculation.py

Github

The codes can also be found in Github: https://github.com/OPeltola/EC_Omega_filtering

Data

The data from each site are given in site-specific *.csv files. See the metadata in README.txt. Yearly friction velocity thresholds are given in ONEflux subdirectory and the file naming and structure follow ONEflux practises.

NEON data are released under Creative Commons CC0 1.0 “No Rights Reserved” (https://creativecommons.org/publicdomain/zero/1.0/).ICOS data is licensed under a Creative Commons Attribution 4.0 international licence (https://creativecommons.org/licenses/by/4.0/).
DOI: 10.5281/zenodo.14259134
title: Data and codes used in Peltola et al. "Towards an enhanced metric for detecting vertical flow decoupling in eddy covariance flux observations"

description: These codes and data can be used to reproduce the results presented in Peltola et al. (2025): "Towards an enhanced metric for detecting vertical flow decoupling in eddy covariance flux observations" submitted to Agricultural and Forest Meteorology.

Codes

Installation

The codes have been run under Windows OS with Python 3.11.6. Install the required Python packages by running pip install -r requirements.txt

Usage

Reproducing figuresYou can reproduce the figures shown in the manuscript by downloading the data from this Zenodo repository and then by runningpython plot_figures.py

Note that the data needs to be located in subfolder `data/`.Processing dataThe data files included in this Zenodo repository can be recreated by downloading data from NEON data portal and ICOS carbon portal, see DOI for each dataset in the manuscript, in addition to NEON PAI data from GBOV website (https://gbov.land.copernicus.eu/dataaccessRM/) and then by running

python process_data.py

Note that `.env` file is needed, there the location of each dataset on the computer should be described.Example Omega calculationFor calculating Omega decoupling parameter for a few example cases, you can run

python example_omega_calculation.py

Github

The codes can also be found in Github: https://github.com/OPeltola/EC_Omega_filtering

Data

The data from each site are given in site-specific *.csv files. See the metadata in README.txt. Yearly friction velocity thresholds are given in ONEflux subdirectory and the file naming and structure follow ONEflux practises.

NEON data are released under Creative Commons CC0 1.0 “No Rights Reserved” (https://creativecommons.org/publicdomain/zero/1.0/).ICOS data is licensed under a Creative Commons Attribution 4.0 international licence (https://creativecommons.org/licenses/by/4.0/).
DOI: 10.6084/m9.figshare.28070978
title: Table S5: Differentially expressed proteins identified in camel milk across comparison groups: HM vs. RM, PM vs. RM, and HHM vs. RM

description: Differentially expressed proteins identified in camel milk across comparison groups: HM vs. RM, PM vs. RM, and HHM vs. RM
DOI: 10.6084/m9.figshare.28070978.v1
title: Table S5: Differentially expressed proteins identified in camel milk across comparison groups: HM vs. RM, PM vs. RM, and HHM vs. RM

description: Differentially expressed proteins identified in camel milk across comparison groups: HM vs. RM, PM vs. RM, and HHM vs. RM
DOI: 10.48597/n2gx-pmrw
title: Measurement of Aerosol_absorption_coefficient at Steamboat Springs, Colorado (Storm Peak Laboratory)

description: Measurement of Aerosol_absorption_coefficient at Steamboat Springs, Colorado (Storm Peak Laboratory)
DOI: 10.15468/dl.2q8de3
title: Occurrence Download

description: A dataset containing 2743511 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Epidalea calamita (Laurenti, 1768), Ichthyosaura alpestris (Laurenti, 1768), Hyla arborea (Linnaeus, 1758), Pelophylax esculentus (Linnaeus, 1758), Rana temporaria Linnaeus, 1758, Bombina variegata (Linnaeus, 1758), Bufo bufo (Linnaeus, 1758), Rana arvalis Nilsson, 1842, Triturus cristatus (Laurenti, 1768), Lissotriton vulgaris (Linnaeus, 1758), Pelobates fuscus (Laurenti, 1768), Pelophylax ridibundus (Pallas, 1771), Pelophylax lessonae (Camerano, 1882), Lissotriton helveticus (Razoumovsky, 1789), Alytes obstetricans (Laurenti, 1768), Salamandra salamandra (Linnaeus, 1758))"
 ]
}

 The dataset includes 2743511 records from 5339 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044296-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111331512
title: Rice Psalter, MS.000372

description: [Text Description:] Illuminated Latin Psalter; on back flyleaves 16th c. accounts ❧ [Text or Publication Number Note:] MS.000372 ❧ [Medium:] Parchment ❧ [Script Note:] Latin ❧ [Physical Object Description:] 133 + ii leaves; 11.9 x 8.7 x 2.1 in. (30.3 x 22.2 x 5.3 cm) ❧ [Physical Object Note:] Vellum with ink ❧ [Physical Object Note:] Illuminations
DOI: 10.15468/dl.pdr2sr
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stanleya pinnata subsp. inyoensis Munz & J.C.Roos"
 ]
}

 The dataset includes 27 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038678-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tk8emy
title: Occurrence Download

description: A dataset containing 20856 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amazona aestiva (Linnaeus, 1758)"
 ]
}

 The dataset includes 20856 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066813-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111331408
title: Rice Psalter, MS.000372

description: [Text Description:] Illuminated Latin Psalter; on back flyleaves 16th c. accounts ❧ [Text or Publication Number Note:] MS.000372 ❧ [Medium:] Parchment ❧ [Script Note:] Latin ❧ [Physical Object Description:] 133 + ii leaves; 11.9 x 8.7 x 2.1 in. (30.3 x 22.2 x 5.3 cm) ❧ [Physical Object Note:] Vellum with ink ❧ [Physical Object Note:] Illuminations
DOI: 10.15468/dl.nw75ry
title: Occurrence Download

description: A dataset containing 877207 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Occurrence evidence, Living Specimen, Material sample, Human Observation, Machine Observation, Observation)",
 "MediaType is Image",
 "TaxonKey is Boraginales"
 ]
}

 The dataset includes 877207 records from 293 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021221-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111306140
title: Monastery of St. John Lampadistis, Ayios Ioannis Lambadhistis Monastery

description: [Text Description:] Complex of 3 churches under one Roof, 11th-18th c. ❧ [Medium:] Stone ❧ [Script Note:] Greek, Non-Text ❧ [Physical Object Description:] Located on east side of stream Setrachos, running along east side of village of Kaopanayiotes. The monastery is a complex of three churches sharing a single pitched roof. Beyond the monastic enclosure is the old schoolhouse, now an icon museum. ❧ [Physical Object Note:] The three churches are: Agios Herakleidios, Ioannis Lampadistis and a Latin Chapel. Agios Herakleidios, built in the 11th c., decorated primarily in 13th c., is a cross-in-square building with four piers supporting a central dome. Ioannis Lamadistis probably built in 1731, on the north side of Herakleidios. No records exist regarding the Latin Chapel. It opens on the north side of the Lampdistis church. A narthex runs along the west side of Herakleidios and Lampadistis. ❧ [Physical Object Note:] In Agios Herakleidios, a few early paintings date to the 12th c. Most of the paintings are 13th c., with a late period series done around 1400. Ioannis Lampadistis contains a reliquary and icon of St. Ioannis (John) Lampadistis. The paintings in the Latin Chapel are Italo-Byzantine; the vaulting is Italianate. The walls north and south are illustrations of the 24 stanzas of the Akathistos Hymn to the Virgin. Some paintings are more Byzantine, others more Italian. ❧
DOI: 10.15468/dl.8htheb
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucalyptus spreta L.A.S.Johnson & K.D.Hill",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044809-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jtaxtj
title: Occurrence Download

description: A dataset containing 579193 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Danaus plexippus (Linnaeus, 1758)"
 ]
}

 The dataset includes 579193 records from 313 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040037-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111306141
title: Monastery of St. John Lampadistis, Ayios Ioannis Lambadhistis Monastery

description: [Text Description:] Complex of 3 churches under one Roof, 11th-18th c. ❧ [Medium:] Stone ❧ [Script Note:] Greek, Non-Text ❧ [Physical Object Description:] Located on east side of stream Setrachos, running along east side of village of Kaopanayiotes. The monastery is a complex of three churches sharing a single pitched roof. Beyond the monastic enclosure is the old schoolhouse, now an icon museum. ❧ [Physical Object Note:] The three churches are: Agios Herakleidios, Ioannis Lampadistis and a Latin Chapel. Agios Herakleidios, built in the 11th c., decorated primarily in 13th c., is a cross-in-square building with four piers supporting a central dome. Ioannis Lamadistis probably built in 1731, on the north side of Herakleidios. No records exist regarding the Latin Chapel. It opens on the north side of the Lampdistis church. A narthex runs along the west side of Herakleidios and Lampadistis. ❧ [Physical Object Note:] In Agios Herakleidios, a few early paintings date to the 12th c. Most of the paintings are 13th c., with a late period series done around 1400. Ioannis Lampadistis contains a reliquary and icon of St. Ioannis (John) Lampadistis. The paintings in the Latin Chapel are Italo-Byzantine; the vaulting is Italianate. The walls north and south are illustrations of the 24 stanzas of the Akathistos Hymn to the Virgin. Some paintings are more Byzantine, others more Italian. ❧
DOI: 10.15468/dl.2t67ff
title: Occurrence Download

description: A dataset containing 13598 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Platycheirus albimanus (Fabricius, 1781)"
 ]
}

 The dataset includes 13598 records from 157 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073797-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zxbwbj
title: Occurrence Download

description: A dataset containing 860613 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Collation of spatial seagrass data (meadow extent polygons, species presence/absence points) from 1984 - 2018 for the Great Barrier Reef World Heritage Area (GBRWHA) (NESP TWQ Project 3.2.1 and 5.4, TropWATER, James Cook University)"
 ]
}

 The dataset includes 860613 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002315-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111306142
title: Monastery of St. John Lampadistis, Ayios Ioannis Lambadhistis Monastery

description: [Text Description:] Complex of 3 churches under one Roof, 11th-18th c. ❧ [Medium:] Stone ❧ [Script Note:] Greek, Non-Text ❧ [Physical Object Description:] Located on east side of stream Setrachos, running along east side of village of Kaopanayiotes. The monastery is a complex of three churches sharing a single pitched roof. Beyond the monastic enclosure is the old schoolhouse, now an icon museum. ❧ [Physical Object Note:] The three churches are: Agios Herakleidios, Ioannis Lampadistis and a Latin Chapel. Agios Herakleidios, built in the 11th c., decorated primarily in 13th c., is a cross-in-square building with four piers supporting a central dome. Ioannis Lamadistis probably built in 1731, on the north side of Herakleidios. No records exist regarding the Latin Chapel. It opens on the north side of the Lampdistis church. A narthex runs along the west side of Herakleidios and Lampadistis. ❧ [Physical Object Note:] In Agios Herakleidios, a few early paintings date to the 12th c. Most of the paintings are 13th c., with a late period series done around 1400. Ioannis Lampadistis contains a reliquary and icon of St. Ioannis (John) Lampadistis. The paintings in the Latin Chapel are Italo-Byzantine; the vaulting is Italianate. The walls north and south are illustrations of the 24 stanzas of the Akathistos Hymn to the Virgin. Some paintings are more Byzantine, others more Italian. ❧
DOI: 10.15468/dl.haj9ub
title: Occurrence Download

description: A dataset containing 1517 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cephalopterus penduliger P.L.Sclater, 1859, Cephalopterus penduliger P.L.Sclater, 1859, Cephalopterus penduliger P.L.Sclater, 1859)",
 "DecimalLatitude is greater than or equal to -14",
 "DecimalLatitude is less than or equal to 13",
 "DecimalLongitude is greater than or equal to -83",
 "DecimalLongitude is less than or equal to -60"
 ]
}

 The dataset includes 1517 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066801-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nmq43n
title: Occurrence Download

description: A dataset containing 30405 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Althaea officinalis L.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "Year is greater than or equal to 1990",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 30405 records from 350 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0161636-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111306093
title: Monastery of St. John Lampadistis, Ayios Ioannis Lambadhistis Monastery

description: [Text Description:] Complex of 3 churches under one Roof, 11th-18th c. ❧ [Medium:] Stone ❧ [Script Note:] Greek, Non-Text ❧ [Physical Object Description:] Located on east side of stream Setrachos, running along east side of village of Kaopanayiotes. The monastery is a complex of three churches sharing a single pitched roof. Beyond the monastic enclosure is the old schoolhouse, now an icon museum. ❧ [Physical Object Note:] The three churches are: Agios Herakleidios, Ioannis Lampadistis and a Latin Chapel. Agios Herakleidios, built in the 11th c., decorated primarily in 13th c., is a cross-in-square building with four piers supporting a central dome. Ioannis Lamadistis probably built in 1731, on the north side of Herakleidios. No records exist regarding the Latin Chapel. It opens on the north side of the Lampdistis church. A narthex runs along the west side of Herakleidios and Lampadistis. ❧ [Physical Object Note:] In Agios Herakleidios, a few early paintings date to the 12th c. Most of the paintings are 13th c., with a late period series done around 1400. Ioannis Lampadistis contains a reliquary and icon of St. Ioannis (John) Lampadistis. The paintings in the Latin Chapel are Italo-Byzantine; the vaulting is Italianate. The walls north and south are illustrations of the 24 stanzas of the Akathistos Hymn to the Virgin. Some paintings are more Byzantine, others more Italian. ❧
DOI: 10.15468/dl.jsvfz2
title: Occurrence Download

description: A dataset containing 343974 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Elevation 0.0-500.0m",
 "Year 1960-1990",
 "Geometry POLYGON((-180 49,180 49,180 51,-180 51,-180 49))",
 "HasCoordinate is true",
 "TaxonKey is Insecta",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 343974 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073794-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cbebsq
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Danio albolineatus (Blyth, 1860)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 61 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002314-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111306161
title: Monastery of St. John Lampadistis, Ayios Ioannis Lambadhistis Monastery

description: [Text Description:] Complex of 3 churches under one Roof, 11th-18th c. ❧ [Medium:] Stone ❧ [Script Note:] Greek, Non-Text ❧ [Physical Object Description:] Located on east side of stream Setrachos, running along east side of village of Kaopanayiotes. The monastery is a complex of three churches sharing a single pitched roof. Beyond the monastic enclosure is the old schoolhouse, now an icon museum. ❧ [Physical Object Note:] The three churches are: Agios Herakleidios, Ioannis Lampadistis and a Latin Chapel. Agios Herakleidios, built in the 11th c., decorated primarily in 13th c., is a cross-in-square building with four piers supporting a central dome. Ioannis Lamadistis probably built in 1731, on the north side of Herakleidios. No records exist regarding the Latin Chapel. It opens on the north side of the Lampdistis church. A narthex runs along the west side of Herakleidios and Lampadistis. ❧ [Physical Object Note:] In Agios Herakleidios, a few early paintings date to the 12th c. Most of the paintings are 13th c., with a late period series done around 1400. Ioannis Lampadistis contains a reliquary and icon of St. Ioannis (John) Lampadistis. The paintings in the Latin Chapel are Italo-Byzantine; the vaulting is Italianate. The walls north and south are illustrations of the 24 stanzas of the Akathistos Hymn to the Virgin. Some paintings are more Byzantine, others more Italian. ❧
DOI: 10.15468/dl.ykdhzm
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odontarrhena orbelica (Ančev & Uzunov) Španiel, Al-Shehbaz, D.A.German & Marhold"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038694-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bjk2vy
title: Occurrence Download

description: A dataset containing 1593 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Muscisaxicola maculirostris Orbigny & Lafresnaye, 1837, Muscisaxicola maculirostris Orbigny & Lafresnaye, 1837, Muscisaxicola maculirostris Orbigny & Lafresnaye, 1837)",
 "DecimalLatitude is greater than or equal to -14",
 "DecimalLatitude is less than or equal to 13",
 "DecimalLongitude is greater than or equal to -83",
 "DecimalLongitude is less than or equal to -60"
 ]
}

 The dataset includes 1593 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066816-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.edj6dk
title: Occurrence Download

description: A dataset containing 79225 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aira praecox L."
 ]
}

 The dataset includes 79225 records from 384 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103223-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nj2f9j
title: Occurrence Download

description: A dataset containing 1483 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Spathodea campanulata Beauverd",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1483 records from 149 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016220-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xmkgfv
title: Occurrence Download

description: A dataset containing 5230 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sagina procumbens L.",
 "MediaType is Image",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 5230 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0409141-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.