cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.27xt22
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Gyrocaryum oppositifolium Valdés"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062735-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vpyu4k
title: Occurrence Download

description: A dataset listing the 3 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Accipiter cooperii (Bonaparte, 1828)"
 ]
}

 The dataset's 3 records were derived from 199 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062732-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nvuxbp
title: Occurrence Download

description: A dataset containing 2759 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (iNaturalist Research-grade Observations, USGS Nonindigenous Aquatic Species database, Vermont Department of Environmental Conservation (VTDEC) Aquatic Biomonitoring, Herbier Louis-Marie (QFA) - Collection de plantes vasculaires, Marie-Victorin Herbarium (MT) - Plantes vasculaires, Herbier du Québec (QUE) - Collection de plantes vasculaires, White River Partnership Vermont Crayfish Records, Aggregated occurrence records of invasive European frog-bit (Hydrocharis morsus-ranae L.) across North America, University of Vermont, Pringle Herbarium, Fishes of Vermont)",
 "Geometry POLYGON((-74.4777 43.77558,-70.20629 43.59276,-70.10815 46.55735,-73.9088 46.11237,-74.4777 43.77558))",
 "TaxonKey is one of (Carassius auratus (Linnaeus, 1758), Butomus umbellatus L., Bithynia tentaculata (Linnaeus, 1758), Cyprinus carpio Linnaeus, 1758, Dreissena polymorpha (Pallas, 1771), Faxonius rusticus (Girard, 1852), Hydrocharis morsus-ranae L., Lepomis cyanellus Rafinesque, 1819, Myriophyllum spicatum L., Nitellopsis obtusa (Desv.) J.Groves, Potamogeton crispus L., Trachemys scripta (Thunberg In Schoepff, 1792), Bythotrephes longimanus Leydig, 1860, Cipangopaludina chinensis (J.E.Gray, 1833), Craspedacusta sowerbii Lankester, 1880, Scardinius erythrophthalmus (Linnaeus, 1758), Tinca tinca (Linnaeus, 1758), Trachemys scripta elegans (Wied, 1838), Viviparus georgianus (I.Lea, 1834), Najas minor All., Stratiotes aloides L., Eriocheir sinensis H.Milne Edwards, 1853, Hemimysis anomala G.O.Sars, 1907, Procambarus clarkii (Girard, 1852), Procambarus virginalis Lyko, 2017, Echinogammarus ischnus (Stebbing, 1899), Cercopagis pengoi (Ostroumov, 1891), Dreissena bugensis (Andrusov, 1897), Corbicula fluminea (O.F.Müller, 1774), Potamopyrgus antipodarum (J.E.Gray, 1843), Ctenopharyngodon idella (Valenciennes, 1844), Trapa natans L., Cabomba caroliniana A.Gray, Elodea densa (Planch.) Casp., Nymphoides peltata (S.G.Gmel.) Kuntze, Hydrilla verticillata C.Presl, 1845, Eichhornia crassipes (Mart.) Solms, Pistia stratiotes L., Myriophyllum aquaticum (Vell.) Verdc., Salvinia Ség.)"
 ]
}

 The dataset includes 2759 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062738-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6gym7c
title: Occurrence Download

description: A dataset containing 1186009 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Denmark",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than 50000",
 "Year is 2016",
 "DecimalLongitude is greater than or equal to 7.0",
 "DecimalLongitude is less than or equal to 11.0",
 "DecimalLatitude is greater than or equal to 54.5",
 "DecimalLatitude is less than or equal to 58.0"
 ]
}

 The dataset includes 1186009 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062711-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w4ecaq
title: Occurrence Download

description: A dataset containing 659 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Quercus canariensis Willd."
 ]
}

 The dataset includes 659 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062740-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14624321
title: WRF inputs and boundary conditions for Li ARC 2025
DOI: 10.5281/zenodo.14624322
title: WRF inputs and boundary conditions for Li ARC 2025
DOI: 10.15468/dl.yn4es4
title: Occurrence Download

description: A dataset containing 3773838 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Accipiter cooperii (Bonaparte, 1828)"
 ]
}

 The dataset includes 3773838 records from 199 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062734-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14616138
title: Bulky Waste Classification From a Distance: Challenges and First Insights

description: A laboratory dataset for multispectral bulky waste material classification.
DOI: 10.5281/zenodo.14616139
title: Bulky Waste Classification From a Distance: Challenges and First Insights

description: A laboratory dataset for multispectral bulky waste material classification.
DOI: 10.18112/openneuro.ds004868.v1.0.3
title: [11C]PS13 demonstrates pharmacologically selective and substantial binding to cyclooxygenase-1 (COX-1) in the human brain
DOI: 10.15454/oixomr
title: Science for policy 4: Manure: spreading the load?

description: This dataset is part of Deliverable 5.3 and was produced by the WP4 team of the Landmark H2020 project. It contains the following tiffs and shapefiles: PO4_35km_Borders.shp PO4_35km_NoBorders.shp PO4_100km_Borders.shp PO4_100km_NoBorders.shp PO4_Max_Borders.shp PO4_Max_NoBorders.shp These shapefiles give an estimation of the change in soil function performance across the EU in agricultural soils after nitrogen surplus redistribution within a 35 km, 100 km and no limited range, with and without limitation in cross-border transport. The spatial variation is represented in change in z-scores compared to the current SF supply. To develop the scenario, current nutrient applications in areas where concentrations in groundwater are above 50 mg nitrates per liter (mg/L), were decreased in order to reach the 50 mg /L level. The excess organic nutrient surplus was then redistributed on other fields within a range of 35 km, 100 km or no distance limitation, which can receive additional nutrients without exceeding the 50 mg N /L threshold for each location. Excess nutrient surpluses were allowed or not to cross borders and no increases in N application were allowed in Natura 2000 sites. Z-scores are calculated from the spatial SF maps. Environmental zones are derived from the Metzger et al. (2013). The z-scores give the signed fractional number of standard deviations by which SF means for an environmental zone are above or below the mean value and allow us indicate which areas have a higher or lower soil function performance compared to the mean value. Z-scores from the current SF maps and scenario maps were then compared to each other to calculate the change in z-scores. This change in z-scores is given in the shapefiles and describes the relative change in soil function performance. Positive values indicate an improvement in soil functioning compared to the current situation, negative values a decrease.
DOI: 10.15454/omngxr
title: Raw data and scripts for the manuscript : "Genetic signatures of divergent selection in European beech (Fagus sylvatica L.) are associated with the variation in temperature and precipitation across its distribution range" "

description: We provide raw SNPs genotypes and sampling locations, as well as R scripts for LD analyses, for differentiation outlier analyses (with pcadapt, and lea) and for GEA analyses (with lfmm and Samβada) associated with the manuscript "Climate-associated genetic variation in European beech (Fagus sylvatica L.) across its distribution range."
DOI: 10.15454/qtxfp9
title: NGS data revealing the phyllosphere microbiome of wheat plants infected by the fungal pathogen Zymoseptoria tritici

description: The fungal pathogen Zymoseptoria tritici is the causal agent of Septoria tritici blotch (STB), a major wheat disease in Western Europe. Microorganisms inhabiting wheat leaves might act as beneficial, biocontrol or facilitating agents that could limit or stimulate the development of Z. tritici. Improving our understanding of microbial communities in the wheat phyllosphere would lead to new insights into STB management. The current resource announcement details the fungal and bacterial metabarcoding datasets obtained by sampling wheat leaves infected by Z. tritici. Tissues with different symptomatology were sampled from three wheat commercial varieties on different sampling dates during a cropping season. Weeds around wheat fields were sampled as complements to the wheat datasets. In total, more than 450 samples were collected. The presence of the pathogen Z. tritici was also quantified using qPCR. We provide the raw metabarcoding datasets, the Amplicon Sequence Variant (ASV) tables obtained after bioinformatic processing, the metadata describing sampling dates, wheat varieties and tissue health condition, a preliminary descriptive analysis of the data, and the code used for bioinformatic and descriptive statistical analysis.
DOI: 10.15454/qa2dib
title: Pluviométrie Aquapôle INRAE

description: Petit fleuve côtier de 39 km de long, la Nivelle est une rivière à migrateurs (saumon, alose, truites de mer) et ses populations sont suivies depuis le début des années 80. Ce Dataset décrit les relevés de pluviométrie qui sont effectués avec un pluviomètre autonome avec enregistrement à basculement de godet depuis juillet 2009 sur l’Aquapôle de l’INRAE à saint Pée sur Nivelle. Le Dataset s’organise sous le format d’un fichier Excel dans lequel est rapporté pour chaque année le nombre de basculement de godet (avec la date et l’heure) qui correspond à un apport de 0,2 mm de précipitation. En fin de page en extrémité droite, un tableau synthétise par mois et par années la quantité de précipitations qu’il y a eu sur le site.
DOI: 10.15454/qckbkf
title: Données lidar acquises par drone UE Citrus, San Giuliano, Corse

description: Acquisitions Lidar par drones l'unité expérimentale Citrus, de San Giuliano, Corse (2B). Survol financé par l'UE Citrus Acquisition le 13 octobre 2021. Télépilotes unité TETIS, Montpellier : Samuel Alleaume : samuel.alleaume@inrae.fr Audrey Jolivot : audrey.jolivot@cirad.fr . Capteur : Yellowscan, Surveyor • Centrale GNSS-inertielle : Applanix APX-15 UAV • Lidar : Velodyne VLP16 (Puck) : Longueur d’onde:905 nm / 300 000 pulses par seconde (300 kHz) / 2 échos par pulse / Angle de vue : 360 deg • Précision : 4cm Vecteur : drone DJI Matrice 600 Pro 4
DOI: 10.15454/tkmgcq
title: Robert et al. Combining crop growth modelling with trait-assisted prediction improved the prediction of genotype by environment interactions

description: Genotyping data, Phenotyping data (Heading date and Grain Yield) used in the study of Robert et al. (220 wheat varieties and 16 environments as well as 139 environmental covariates describing each environment).
DOI: 10.15454/tbznro
title: Projet Artisols - NoData SPOT 6/7 - Occitanie - 2015 à 2019

description: Le projet ArtiSols, soutenu par la Région Occitanie et le Fonds Européen de Développement Régional (FEDER), s’inscrit dans une démarche d’évaluation et de qualification du processus d’artificialisation des sols en région Occitanie. Piloté par INRAE (UMR TETIS), ce projet rassemble des établissements de recherche (INRAE, CNRS, INPT), des services de l’État (DRAAF Occitanie) et de la Région Occitanie (Direction de l’Aménagement, du Foncier et de l’Urbanisme), et les aménageurs BRL et CACG. Les données de nodata par année (entre 2015 et 2019) correspondent aux zones de nuages et de leurs ombres portées sur les images satellites SPOT 6/7 utilisées pour la classification d'occupation du sol, donnée source pour les analyses géographiques qui ont suivi (extraction des espaces bâtis, des taches urbaines, indicateurs spatialisés)
DOI: 10.15454/s1mtzg
title: Dataset of rheological properties of fine powders from pine bark and wheat straw produced by different milling and mixing itineraries

description: Forty lignocellulosic fine powders were produced by different itineraries to introduce variability in their rheological behaviour and their particle characteristics. The powders’ rheological properties (basic flowability energy, permeability, aeration, cohesion, compressibility) were determined using a Freeman Technology’s powder rheometer, their particle size distributions were measured by laser granulometry and their shapes by optical granulo-morphometry. The starting materials for powders production were maritime pine bark, a layered corky material, and wheat straw, a fibrous tenacious stem material. Different mills were used to produce a set of 20 µm-average particle size powders: a batch vibrating ball-mill, a batch rotary ball-mill, a batch stirred bead-mill, a continuous impact mill, a continuous air jet-mill. Another sample set consisted of bark and straw powders of different mean particle sizes ranging from 10 to 50 µm produced by the vibrating mill. Finally, a last set was composed of blends (different ratios from 50/50 to 90/10) of 20 µm-centred straw powders-to-bark powders of different mean particle sizes (10 µm, 20 µm, 35 µm, 50 µm).
DOI: 10.15454/v53jzv
title: A ready-to-use database for mothur: Diat.barcode_rbcL_263bp_mothur based on Diat.barcode v10

description: Adaptation of Diat.barcode v10 to Mothur pipeline
DOI: 10.15454/sfe2d7
title: Images of sea trout scales from Nivelle

description: Photographs of scales collected from sea trout trapped during their upstream migration in the river system of Nivelle (southwest of France).
DOI: 10.15454/tlo5lx
title: Cassiopée: tools for designing fish crossing devices for upstream and downstream migrations, and hydraulic calculation tools for environmental and agricultural engineering. Version 4.19.1

description: Cassiopée is a software dedicated to rivers hydraulics with especially some help for sizing fish passes, agricultural hydraulics and open-channel hydraulics in general. It comes in the form of independent calculation modules allowing one to solve a given problem. Calculation modules may be chained (parameters or calculation results may be linked from one module to another) in order to build complex calculation chains. Users may locally save the modules they use, in order to reuse them later. Available in French and English, “Cassiopée” is an open source and free software accessible online at https://cassiopee.g-eau.fr or as an offline application for Windows, Linux, macOS and Android.
DOI: 10.15454/t9x2v0
title: Données de réplication pour : article Verstraeten et al DSM 33383

description: Description of a newly isolated Blautia faecis strain and its benefit in mouse models of post-influenza secondary enteric and pulmonary infections.
DOI: 10.15454/varjyj
title: Phenology, productivity, fruit size, outer fruit, inner fruit, and vigor traits in an apple reference population

description: This dataset contains the phenotypic data of the apple REFPOP multisite trial. The apple REFPOP (reference population) is made of 534 genotypes, split into two groups: an accession group, involving 269 accessions of European and non-European origin representing the diversity in cultivated apple, and a progeny group, comprising 265 genotypes, which stemmed from 27 parental combinations. The population was planted in six locations in 2016, with two or four trees of each genotype/accession per location. The six locations were (i) Rillaar, Belgium, (ii) Angers, France, (iii) Laimburg, Italy, (iv) Skierniewice, Poland, (v) Lleida, Spain and (vi) Wädenswil, Switzerland. Thirty traits related to phenology, productivity, fruit size, outer fruit, inner fruit, and vigor were evaluated at up to six locations, during up to three seasons (2018-2020). Trunk diameter was measured in 2017 in some locations, enabling for a trunk increment calculation for 2018. Data for all traits were used in the paper by Jung et al. (2022) "Genetic architecture and genomic predictive ability of apple quantitative traits across environments" and are published in version 2 of the dataset. Data for harvest date, fruit overcolor, fruit weight and fruit number, were used in the paper by Cazenave et al. (2021) "Combining genetic resources and elite material populations to improve the accuracy of genomic prediction in apple" (see Metadata for complete reference) and were made available in the first version of the dataset.
DOI: 10.15454/w6baug
title: Agronomy and Grain-Legumes WoS DataSet 1980-2018

description: The text file corresponds to the search query capturing the main agronomy research theme on grain-legumes (both soya and pulses, see Species Grain-Legumes WoS dataset) to be applied on the WoS (Web of Knowledge). This search query is restricted to the main types of scientific literature documents, namely the types: article, book, book chapter, and review. This translated into the query DT = ("Article" OR "Book" OR "Book Chapter" OR "Review"); the time range selected is 1980-2018 (PY = "1980-2018"). Agronomy theme refers to various ways to grow legume crops and provided services. UT file corresponds to the results of this search query (UT refers to a WoS unique identifier for each record retrieved) after a post-processing step which eliminated the records captured by the Wos KeyWord Plus : ie, the UT file correspond to records containing terms of the search query only in title, abstract, and (regular) keywords. See the related publication for more information.
DOI: 10.15454/xmekfx
title: Oak stands along an elevation gradient have different molecular strategies for regulating bud phenology

description: These files includes normalized values for RNAseq data, Fold change Ratio, Gene set enrichment analysis and subnetwork enrichment analysis for genes displaying a significant dormancy, elevation and dormancy-by-elevation interaction effect analysed in the paper entilted: "Locally adapted oak populations along an elevation gradient display different molecular strategies to regulate bud phenology".
DOI: 10.15454/tjc6sp
title: MINTIA paper Simulated data

description: 90 sets of reads associated to the 45 simulated fosmids used in MINTIA paper (extraction of 15 sets of sequence from 3 genomes x 2 sequencing machines)
DOI: 10.15454/ttr25s
title: Life cycle assessment data of French agricultural organic products

description: This data were created during the research project ACV Bio, funded by the French agency for ecological transition (ADEME), and the French ministry for ecological transition. Its main objective was the production of Life Cycle Inventory (LCI) and Life Cycle Assessement (LCA) data on a variety of plant and animal products from French organic farming at the farm gate. The dataset produced contains 173 LCAs of organic crop and animal products. A diversity of production modes was covered for the majority of the products. LCA results for the Ecological Footprint 2.0, Cumulative energy demand, Land competition and Biodiversity loss characterization methods are available in this Excel File. LCA results are expressed both per kg of product and per ha of land occupied. The three non-LCA indicators – DCF, AEI and PTFI – are also available at the end of the Excel file. These data represent a diversity of LCA of French organic products but are not representative of national or regional average. Therefore, we recommend using these data to characterize part of the diversity of organic farming systems and some of their environmental impacts; to identify areas for improvement; to perform eco-design and sensitivity analysis; or/and to carry out system choices in a given context.
DOI: 10.15454/zj9c1h
title: RPG complété 2018 département 09

description: RPG complété 2018. Complète le RPG campagne 2018 pour le département 09. (contient les parcelles agricoles hors RPG) Données géographiques (vectorielles, shapefile), parcellaires. Sources : IGN, OSO/Cesbio. Traitements : INRAE US ODR, 2020.
DOI: 10.7266/n7cr5rvm
title: 4.2K Phosphorescence Lifetimes of Polycyclic Aromatic Sulfur Heterocycles with Molecular Weight 234
DOI: 10.15468/dl.cvva7m
title: Occurrence Download

description: A dataset containing 4229 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Choloepus hoffmanni Peters, 1858",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4229 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032075-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17180/obs.real
title: Bassin versant expérimental du Réal Collobrier

description: Le bassin versant expérimental du Réal Collobrier est situé sur la façade méditerranéenne dans le département du Var, à l’extrémité Ouest du massif montagneux des Maures, à 20 km au Nord-est de Toulon. Avec 17 postes pluviographiques et 11 stations de contrôle de débits répartis sur 70 km2 il constitue un site repère de l’hydro-climatologie régionale depuis 1966.Sites expérimentauxReal CollobrierLe bassin versant expérimental du Réal Collobrier est situé sur la façade méditerranéenne dans le département du Var, à l’extrémité Ouest du massif montagneux des Maures, à 20 km au Nord-est de Toulon. Avec 17 postes pluviographiques et 11 stations de contrôle de débits répartis sur 70 km2 il constitue un site repère de l’hydro-climatologie régionale depuis 1966.
DOI: 10.15454/yieczs
title: Genetic diversity for seed germination in response to temperature and scarification / Diversité génétique pour la germination des graines de luzerne en réponse à la température et à la scarification

description: Lucerne (Medicago sativa), a major perennial pasture legume, belongs to a species complex that includes several subspecies with wild and cultivated populations. Stand establishment may be compromised by poor germination. Seed scarification and deterioration as well as temperature have an impact on germination. The objective of this study was to analyse the genetic diversity of lucerne germination in response to three factors: (1) temperature, with seven constant temperatures ranging from 5 to 40°C, was tested on 38 accessions, (2) seed scarification was tested on the same accessions at 5 and 22°C, (3) seed deterioration was tested on two accessions and two seed lots at the seven temperatures.