cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20278602.v2
title: 3D models and morphological data of Desmophyllum pertusum colony samples

description: Skeletal colony fragments of the deep-water coral <em>Desmophyllum pertusum</em> were digitized using the 3D surface scanner Artec Space Spider with the software Artec Studio 15. Multiple individual scans of each specimen were assembled through <em>Auto-alignment</em>, and converted into watertight polygonal 3D models (resolution 0.2 mm) using <em>Sharp fusion</em>. Noise and artefacts were removed whenever necessary with the <em>Small-object filter</em>, <em>Eraser</em> and <em>Defeature brush</em> tools. Convex hulls of the 3D models, as well as geometric (volume and surface area) measures of 3D models and convex hulls were computed in MeshLab v2020.12. <em>Compactness </em>was calculated as the ratio of mesh volume to convex hull volume. <em>Packing </em>was calculated as the ratio of mesh surface area to convex hull surface area. <em>Compactness</em> and <em>packing</em> are both dimensionless variables.
DOI: 10.6084/m9.figshare.22061006.v1
title: MOTEMO-OUTDOOR Dataset

description: This is the dataset from the study "MOTEMO-OUTDOOR: ensuring learning and health security during the COVID-19 pandemic through outdoor and online environments in higher education". A full text of this article can be found at https://www.researchgate.net/publication/368387609_MOTEMO-OUTDOOR_ensuring_learning_and_health_security_during_the_COVID-19_pandemic_through_outdoor_and_online_environments_in_higher_education
DOI: 10.17632/fw286mn4k7
title: Time of CTA after BD

description: Time-dependent outcomes of computed tomography angiography after clinically apparent brain death
DOI: 10.6084/m9.figshare.1625303
title: <i>In vitro</i> and <i>in vivo</i> genotoxic effects of straight versus tangled multi-walled carbon nanotubes

description: Some multi-walled carbon nanotubes (MWCNTs) induce mesothelioma in rodents, straight MWCNTs showing a more pronounced effect than tangled MWCNTs. As primary and secondary genotoxicity may play a role in MWCNT carcinogenesis, we used a battery of assays for DNA damage and micronuclei to compare the genotoxicity of straight (MWCNT-S) and tangled MWCNTs (MWCNT-T) <i>in vitro</i> (primary genotoxicity) and <i>in vivo</i> (primary or secondary genotoxicity). C57Bl/6 mice showed a dose-dependent increase in DNA strand breaks, as measured by the comet assay, in lung cells 24 h after a single pharyngeal aspiration of MWCNT-S (1–200 μg/mouse). An increase was also observed for DNA strand breaks in lung and bronchoalveolar lavage (BAL) cells and for micronucleated alveolar type II cells in mice exposed to aerosolized MWCNT-S (8.2–10.8 mg/m<sup>3</sup>) for 4 d, 4 h/d. No systemic genotoxic effects, assessed by the γ-H2AX assay in blood mononuclear leukocytes or by micronucleated polychromatic erythrocytes (MNPCEs) in bone marrow or blood, were observed for MWCNT-S by either exposure technique. MWCNT-T showed a dose-related <i>decrease</i> in DNA damage in BAL and lung cells of mice after a single pharyngeal aspiration (1–200 μg/mouse) and in MNPCEs after inhalation exposure (17.5 mg/m<sup>3</sup>). <i>In vitro</i> in human bronchial epithelial BEAS-2B cells, MWCNT-S induced DNA strand breaks at low doses (5 and 10 μg/cm<sup>2</sup>), while MWCNT-T increased strand breakage only at 200 μg/cm<sup>2</sup>. Neither of the MWCNTs was able to induce micronuclei <i>in vitro</i>. Our findings suggest that both primary and secondary mechanisms may be involved in the genotoxicity of straight MWCNTs.
DOI: 10.6084/m9.figshare.3550473.v1
title: Appendix A. Historical trends in winter temperature, annual precipitation, and annual snowfall at the USSES.

description: Historical trends in winter temperature, annual precipitation, and annual snowfall at the USSES.
DOI: 10.17632/ckvn6k8vzk
title: Pengaruh Program Dewan Kemakmuran Masjid (DKM) terhadap Minat Remaja dalam Memakmurkan Masjid Al-Muttaqin Desa Bumi Mulya

description: Tujuan Penelitian: Penelitian ini memiliki tujuan strategis untuk mengeksplorasi secara mendalam peran Dewan Kemakmuran Masjid (DKM) Al-Muttaqin dalam upaya membangkitkan semangat keagamaan dan partisipasi generasi muda, dengan fokus utama pada identifikasi menyeluruh terhadap program-program yang telah dijalankan dalam rangka memakmurkan masjid.
Metode Penelitian: dirancang secara kuantitatif dengan metode survei. Lokasi di Masjid Al-Muttaqin Desa Bumi Mulya, Penarik, Mukomuko, Bengkulu. Populasi yaitu semua remaja di Desa Bumi Mulya, khususnya berusia antara 13-18 tahun, teknik sampling yang digunakan adalah random sampling. Teknik pengumpulan data yang digunakan yaitu observasi, kuesioner, dan wawancara. Analisis data penelitian ini dengan pendekatan regresi linier sederhana. Hasil penelitian diuraikan dalam tabel dan deskriptif.
Hasil Penelitian: menunjukkan bahwa program Dewan Kemakmuran Masjid (DKM) Al-Muttaqin di desa Bumi Mulya berada pada kategori sedang, yang ditunjukkan oleh 36 responden (69,23%) yang berada dalam kategori tersebut, dan minat remaja dalam memakmurkan masjid juga berada pada kategori sedang dengan proporsi yang sama; penelitian ini menemukan adanya pengaruh signifikan antara program DKM dengan minat remaja, yang dibuktikan dengan nilai korelasi r_(xy) sebesar 0,292, dimana faktor-faktor yang mempengaruhi minat remaja meliputi kegiatan seperti Shalat berjamaah, pelaksanaan Peringatan Hari Besar Islam (PHBI), kegiatan keagamaan bersama, kerja bakti membersihkan masjid, dan kegiatan membaca Al-Qur'an bersama yang dapat mengikutsertakan para remaja dalam program DKM.
DOI: 10.6084/m9.figshare.21235803.v1
title: Nishikawa et al Echinotriton data.xls

description: Measurement data of external morphology of Echinotriton newts.
DOI: 10.6084/m9.figshare.18133986.v1
title: EEG raw dataset7

description: EEG raw dataset in brainvision format. Can be imported to EEGLAB. splitted into 7 subsets due to the limitation on upload size in figshare
DOI: 10.17632/8xsrwnb684
title: e-learning Latinamerica search, countries, dates and sample

description: Research strings of e-learning in Latinamerica systematic review. Includes every string, its number of findings, date and sample whitin scope.
DOI: 10.6084/m9.figshare.16691458.v1
title: Nutrient concentrations of lower Changjiang River.xlsx

description: This file includes the nutrient concentrations data of surface river water samples. The samples were collected monthly from September 2009 to August 2010, at the Xuliujing station in the lower Changjiang main channel (31°47′ N, 120°56′ E).
DOI: 10.6084/m9.figshare.24999185.v2
title: Navas-Olive, Rubio, et al. (2023). Figure 6 - data

description: <b>Figure 6. Extending sharp-wave ripple detection to non-human primates. c)</b> Significant differences between SWR recorded in mice and monkey. <b>d)</b> The best model of each architecture trained in mouse data, and the best filter configuration for mouse data, were applied to detect SWRs on the macaque data. We evaluated all models by computing F1-score against the ground truth (GT). Note relatively good results from non-retrained ML models and filter. <b>e)</b> Results of model re-training using macaque data. Data were split into a training and validation dataset (50% and 20% respectively), used to train the ML models; and a test set (30%), used to compute the F1 (left panel). Filter was not re-trained. <b>f)</b> F1-scores for the maximal performance of each model before and after re-training.
DOI: 10.6084/m9.figshare.28190351.v2
title: Data supporting the findings of the paper

description: <b>Description</b>：This dataset includes experimental results from the study on load torque identification in Permanent Magnet Synchronous Motors (PMSM) using the Fuzzy Super-Twisting Sliding Mode Observer (FST-SMO). The experiments were conducted under varying conditions to analyze the system's dynamic performance, current harmonics, and speed response.Each file represents results for a specific experimental condition, which is encoded in the file names as follows:<b>EXP1, EXP2, EXP3</b>: Different experimental setups.<b>300, 2000</b>: Operating speed in revolutions per minute (rpm).<b>1_2, 2_4</b>: Indicates different load torque values or system configurations.File Details:<b>EXP1_PI_300_1_2.xlsx</b>: Data for Experiment 1 at 300 rpm under a 1.2 Nm load.<b>EXP1_PI_300_2_4.xlsx</b>: Data for Experiment 1 at 300 rpm under a 2.4 Nm load.<b>EXP2_2000_1_2.xlsx</b>: Data for Experiment 2 at 2000 rpm under a 1.2 Nm load.<b>EXP2_2000_2_4.xlsx</b>: Data for Experiment 2 at 2000 rpm under a 2.4 Nm load.<b>EXP2_300_1_2.xlsx</b>: Data for Experiment 2 at 300 rpm under a 1.2 Nm load.<b>EXP2_300_2_4.xlsx</b>: Data for Experiment 2 at 300 rpm under a 2.4 Nm load.<b>EXP3_2000_1_2.xlsx</b>: Data for Experiment 3 at 2000 rpm under a 1.2 Nm load.<b>EXP3_2000_2_4.xlsx</b>: Data for Experiment 3 at 2000 rpm under a 2.4 Nm load.<b>EXP3_300_1_2.xlsx</b>: Data for Experiment 3 at 300 rpm under a 1.2 Nm load.<b>EXP3_300_2_4.xlsx</b>: Data for Experiment 3 at 300 rpm under a 2.4 Nm load.This dataset supports the analysis and validation of the proposed FST-SMO method and its effectiveness in load torque identification and suppression of current harmonics in PMSMs.
DOI: 10.17632/v5fp7n39hg
title: Data for: A Location-Based Orientation-Aware Recommender System Using IoT Smart Devices and Social Networks

description: In this study, 20 recommendation lists are provided for each of 7,214 user's locations in total. Four different buffer sizes (two, five, ten, and 15 km) and four UPDs are considered for each user's location to prepare the event recommendation lists. In the implemented scenario, three different scenarios were applied in order to support research claims. The word "SC" refers to a specific scenario as "SC_1" refers to the first scenario. Totally, considering four circle buffers and four UPDs in each buffer, 16 buffer lines will be prepared as "sc_1_line_1" refers to the first UPD in the buffer size of two kilometers. In addition, "sc_1_cycle" refers to all the event venues that are located in the circle buffer size of two kilometers. "EventVenues" and "venuesMBBs" contain geospatial information for the selected venues and also their extracted minimum bounding boxes. All the imported building located in the city of Calgary, Alberta is in the "calgaryBuilding" table, and "userLocations" shows the spatial information considered for the 7,214 user's locations.
DOI: 10.6084/m9.figshare.12805583.v1
title: GATA1_110C_rep1.bwHPFH data

description: bigwig tracks
DOI: 10.6084/m9.figshare.13042019
title: Supplementary Material for: Acute Kidney Injury in COVID-19 Patients: An Inner City Hospital Experience and Policy Implications

description: <b><i>Background:</i></b> Although diffuse alveolar damage and respiratory failure are the key features of coronavirus disease 2019 (COVID-19), the involvement of other organs such as the kidney has also been reported. The reports of the incidence of acute kidney injury (AKI) in COVID-19 patients vary widely. In this study, we report our unique experience with AKI in COVID-19 patients in a low socioeconomic and predominantly ethnic minority group and provide its incidence, risk factors, and prognosis to expand the current understanding of this complication. <b><i>Methods:</i></b> In this single-center, retrospective cohort study, we analyzed the data of 469 COVID-19 patients admitted to the Brookdale University Hospital in Brooklyn, NY, from March 18 through April 23, 2020. Information regarding demographics, comorbidities, medications, clinical and laboratory data, and outcomes was collected from the electronic medical records. Both univariate and multivariate analyses were performed to determine the association of AKI with in-hospital mortality. <b><i>Results:</i></b> The median age was 66 years (interquartile range [IQR] 25–75; range 19–101 years), and 268 (57.14%) patients were male. Estimated glomerular filtration rate (eGFR) as determined by the Modification of Diet in Renal Disease Study Equation was low (&lt;60 mL/min/1.73 m<sup>2</sup>) in 207 (44.1%) patients. During hospitalization, 128 (27.3%) patients developed AKI, and the incidence was significantly higher in those patients presenting with a low eGFR (<i>N</i> = 81, 39.1%; <i>p</i> &lt; 0.001). Male sex, hypertension, the use of angiotensin-converting enzyme inhibitors and non-steroidal anti-inflammatories, hemodynamic instability, mechanical ventilation, acute respiratory distress syndrome, and admission elevated ferritin, creatinine kinase, brain natriuretic peptide, and troponin 1 were identified as the risk factors for in-hospital AKI. Ninety-seven (28.45%) patients died in the non-AKI group versus 91 (71.1%) in the AKI group (<i>p</i> &lt; 0.001). The Cox proportional hazard model after adjusting for age, gender, comorbidities, hemodynamic status, and PF ratio (arterial oxygen partial pressure [PaO<sub>2</sub>]/fractional inspired oxygen [FiO<sub>2</sub>]) determined that on admission, an elevated blood urea nitrogen (hazard ratio [HR]: 1.75; 95% confidence interval [CI] 1.23–2.48), a low eGFR (HR 1.43; CI 1.1–2.03), AKI stage 1 (HR 1.14; CI 0.64–2.03), AKI stage 2 (HR 1.86; CI 1.03–3.56), and AKI stage 3 (HR 2.1; CI 1.3–2.81) were independent risk factors for in-hospital mortality. Renal replacement therapy (RRT) did not improve survival in stage III AKI. <b><i>Conclusion:</i></b> AKI in our hospitalized COVID-19 patients was common and carried a high mortality, especially in patients with AKI stage 3. RRT did not improve survival. Policy changes and planning for this high incidence of AKI in COVID-19 patients and its associated high mortality are necessary at the local and national levels.
DOI: 10.17632/242b59vfwg
title: Supplemental Table 1

description: Supplemental Table 1 for, "Methotrexate for pyoderma gangrenosum: a retrospective case series of 33 patients"
DOI: 10.17632/pcpxkgfzfr
title: Echinococcus multilocularis genetic analysis

description: "BEAUti_setting" and "data_whole.xml" were a BEAUTi file and a generated file for BEAST v1.10.4. "data_whole.fasta" and "dataset_locations.txt" files were used for BEAUTi settings. Stop codons of each protein-coding sequence (in data_whole.fasta) were deleted for the model selection by Kakusan4.
"data_MtG_network.nex" and "data_Mt3CDSs_network.nex" are original files for the haplotype network analysis by PopART v1.7.
DOI: 10.6084/m9.figshare.24599172.v1
title: atomlenz dataset

description: This dataset of hand drawn images of molecular depictions incorporates 4 sub dataset:* dataset to train atom-type object detection model* dataset to train bond-type object detection model* dataset to train charge-type object detection model* dataset to train stereocenter-type object detection model
DOI: 10.6084/m9.figshare.13655693.v1
title: Supplementary Material for: A Systematic Review on the Impact of Genetic Testing for Familial Melanoma II: Psychosocial Outcomes and Attitudes

description: <b><i>Background:</i></b> Although genetic testing for known familial melanoma genes is commercially available, clinical implementation has been restrained as utility is unclear, concerns of causing psychological distress are often cited, and consumer interest and perceptions are not well understood. A review of studies exploring participant-reported psychosocial outcomes and attitudes towards genetic testing for familial melanoma will provide insight into common emotional and cognitive responses. <b><i>Methods:</i></b> Database searches of PubMed, Embase, CINAHL, PsycINFO and the Cochrane Library were conducted using a date range of January 1995 to June 2020. Studies examining any psychosocial outcomes alongside genetic testing (real or hypothetical), in participants described as having a high risk of melanoma, were eligible. A narrative synthesis of results was used to describe psychosocial outcomes and summarise participant beliefs and attitudes towards genetic testing. <b><i>Results:</i></b> Limited evidence of adverse psychosocial outcomes was found. No impacts on perceived risk or control were reported, and minimal decisional regret was recorded. Generalised distress was comparable between both genetic mutation carriers and non-carriers, often decreasing over time from pretesting levels. Melanoma-specific distress was frequently higher in carriers than non-carriers; however, this difference was present prior to testing and often associated with personal melanoma history. Overall, participants’ attitudes towards testing were largely positive, with benefits more frequently described than limitations, and support for testing minors was strong. <b><i>Conclusions:</i></b> This review has found evidence of few adverse psychological outcomes following genetic testing. There was no indication of increased distress after genetic test results had been disclosed. If these findings were replicated in additional, larger, diverse populations over a longer follow-up period, this would be compelling evidence to guide clinical recommendations.
DOI: 10.6084/m9.figshare.23939526.v1
title: END.rds

description: Endothelial single-cell atlas of cigarette smoking lung. Seurat obj.
DOI: 10.6084/m9.figshare.6734828.v1
title: Modular structure in fish co-occurrence networks - Code

description: Four files are included here. One is a combined R script to run all of the network and cluster analyses performed in McGarvey & Veech: <i>Modular structure in fish co-occurrence networks</i>. <br><br>The other three files are Microsoft Excel files with embedded Visual Basic for Applications functions to run the Congruence analyses.
DOI: 10.17632/2y2mmhzvcx
title: Surface Solar Radiation Dataset at Zhongshan Station, Antarctica

description: The long-term (1989.3-2020.3) estimated DGSR constructed by a random forest (RF) model using conventional meteorological observation data andobserved DGSR. Column 1: Year. Column 2: Month. Column 3: Day. Column 4: DGSR data from RF model in “MJ/m2” unit. The long-term estimated DGSR provides a more detailed solar radiation data for us to understand and study the role of Antarctica in global climate change and the interaction between snow, ice and atmosphere.
DOI: 10.17632/dz598928gg
title: Spin Polarized First Principles Study of Rhombohedral R3c AlFeO3 under GGA and GGA+U Framework.

description: Data contains Spin polarized DFT calculation results for rhombohedral R3c phase of AlFeO3 perovskite under both GGA as well as GGA+U framework. Fundamental ground state properties are evaluated, which highlights the multifunctional character of this phase, demonstrating its application potential in various domains such as UV detection/ shielding, limited reflection coatings, multi-stimuli sensors. etc.
DOI: 10.17632/ymgtfpj3bw
title: Data for: Synchronous estimation of state of health and remaining useful lifetime for lithium-ion battery using the incremental capacity and artificial neural networks

description: NASA lithium battery dataset
DOI: 10.6084/m9.figshare.17061518.v1
title: Supplementary Material for: Ticagrelor versus Prasugrel in Patients with Acute Coronary Syndrome Undergoing Percutaneous Coronary Intervention - analysis from the Acute Coronary Syndrome Israeli Survey (ACSIS)

description: Introduction: We aimed to compare the outcomes of ACS (acute coronary syndrome) patients undergoing in-hospital PCI (percutaneous coronary intervention) treated with prasugrel versus ticagrelor. Methods: Among 7,233 patients enrolled to the ACSIS (Acute Coronary Syndrome Israeli Survey) between 2010 and 2018, we identified 1126 eligible patients treated with prasugrel and 817 with ticagrelor. Comparison between the groups was preformed separately in ST-elevation myocardial infarction (STEMI) patients, propensity score matched (PSM) STEMI patients, and non-ST-elevation ACS (NSTE-ACS) patients. Results: In-hospital complication rates, including rates of stent thrombosis, were not significantly different between groups. In PSM STEMI patients, 30-day re-hospitalization rate (p &lt;0.05), 30-day MACE (the composite of death, MI, stroke and urgent revascularization; p=0.006), and 1-year mortality rates (p = 0.08) were higher in the ticagrelor group compared to the prasugrel group; In NSTE-ACS patients, outcomes were not associated with drug choice. In cox regression analysis applied on the entire cohort, prasugrel was associated with lower 1-year mortality in STEMI patient but not in NSTE-ACS patients (p for interaction 0.03). Conclusions: Compared to ticagrelor, prasugrel was associated with superior clinical outcomes in STEMI patients, but not in NSTE-ACS patients.
DOI: 10.6084/m9.figshare.22275640.v1
title: Supplementary Material for: Patients’ perspectives on the development of prescription opioid use disorder in patients with chronic non-cancer pain

description: Introduction: In the past decade prescription opioid use increased exponentially and concomitantly opioid use disorders (OUD) are becoming more common. Several risk factors for developing OUD have been identified, but little is known regarding the patients’ perspective on developing a prescription OUD. Methods: We recruited 25 adults undergoing treatment for prescription OUD. In-depth, semi-structured interviews focussed on experiences with long term opioid use, knowledge and attitudes regarding opioids, and access to opioids. A directed content analysis was conducted on the transcribed interviews using Nvivo. Results: Participants showed that the development of an OUD is affected by various factors which could be grouped into three themes: 1) experiences driving initiation, 2) experiences driving continuation, and 3) experiences with prescription OUD. Besides the need for pain management, the dynamics of patient-provider communication, care coordination, provider vigilance, and environmental support all contributed to the way patients used their opioids. Discussion/Conclusion: Patients’ experiences illustrate that the first stage of the development of prescription OUD differs from the development of other substance addictions. Negative reinforcement might play a more prominent role in the early phase of prescription opioid use. Patients expressed a lack of guidance, both at the start of use and long-term use, easy access to new prescriptions and a lack of monitoring as main drivers of the development. Poorly controlled pain and subjective stress fuelled continuous opioid use.
DOI: 10.6084/m9.figshare.28120046.v1
title: CovinaCityYard_ppt_2017_2019_LMT.csv

description: Precipitation data accessed from the Covina City Yard weather station (34°05'30.5"N, 117°52'48.4"W) from the National Oceanic and Atmospheric Administration (NOAA) from 2017 to 2019. Metadata file that contains column descriptions is included.