cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/hhrohp-ouc112194095
title: Denise Namburete, interview, White River, South Africa, 2022

description: Denise Namburete, White River, South Africa, 2022 August 9, oral history interview, by Maylis Basturk, Los Angeles, California, USA. The inteview was conducted over the Internet (Zoom) as part of the Health and Human Rights Oral History Project.Denise Namburete is an award-winning social change expert and practitioner with extensive experience on policy outreach and advocacy who has devoted her 20 year career to enabling behavioral, social, and policy change. Namburete successfully led the Mozambique State Budget Monitoring Forum, a platform of 21 local and international organizations, in a campaign for fiscal transparency and accountability stemming from the misuse of public funds in the $2 billion hidden debt scandal, which led to Mozambique’s social and economic crisis. In her oral history, she recounts her work pursuing various advocacy and legal means to nullify the loans, hold responsible parties to account, and repatriate the funds. She explains the intersections between her organization, N’weti, which focuses on health services delivery and communication, and her work in advocacy, governance and civil society monitoring, which has been critical to strengthening the health system and contributing to sustainable development in Mozambique.
DOI: 10.25549/hhrohp-ouc112194094
title: Allan Maleche, interview, Nairobi, Kenya, 2022

description: Allan Maleche, Nairobi, Kenya, 2022 April 29, oral history interview, by Maylis Basturk, Los Angeles, California, USA. The inteview was conducted over the Internet (Zoom) as part of the Health and Human Rights Oral History Project, Institute on Inequalities in Global Health, University of Southern California, Los Angeles, California, USA.Allan Maleche is an advocate of the high court of Kenya and a human rights defender with over fifteen years of experience in law, ethics, governance, policy, health and rights, including eight years managing rights-based programs that protect affected, marginalized, and vulnerable populations. In this oral history interview, he recounts landmark cases pertaining to the unlawful incarceration of tuberculosis patients and the forced sterilization of women, as well as his broader work to advance HIV-related human rights in Kenya and his multiple roles held with The Global Fund to fight AIDS, Tuberculosis and Malaria. Maleche is currently Executive Director of Kenya Ethical & Legal Issues Network on HIV & AIDS (KELIN). He sits on and co-chairs the UNAIDS Human Rights Reference Group on HIV and Human Rights and is a member of the International Advisory Board for the Global Health Centre.
DOI: 10.25549/hhrohp-ouc112194092
title: Allan Maleche, interview, Nairobi, Kenya, 2022

description: Allan Maleche, Nairobi, Kenya, 2022 April 29, oral history interview, by Maylis Basturk, Los Angeles, California, USA. The inteview was conducted over the Internet (Zoom) as part of the Health and Human Rights Oral History Project, Institute on Inequalities in Global Health, University of Southern California, Los Angeles, California, USA.Allan Maleche is an advocate of the high court of Kenya and a human rights defender with over fifteen years of experience in law, ethics, governance, policy, health and rights, including eight years managing rights-based programs that protect affected, marginalized, and vulnerable populations. In this oral history interview, he recounts landmark cases pertaining to the unlawful incarceration of tuberculosis patients and the forced sterilization of women, as well as his broader work to advance HIV-related human rights in Kenya and his multiple roles held with The Global Fund to fight AIDS, Tuberculosis and Malaria. Maleche is currently Executive Director of Kenya Ethical & Legal Issues Network on HIV & AIDS (KELIN). He sits on and co-chairs the UNAIDS Human Rights Reference Group on HIV and Human Rights and is a member of the International Advisory Board for the Global Health Centre.
DOI: 10.5281/zenodo.10654466
title: Demo 10x Visium dataset for STQ

description: The small dataset includes FASTQ files with 13,043,592 reads from 65 Visium spots of sample WM4237_TE_S1_ST. See https://doi.org/10.1101/2023.07.27.550727 for the full datasets details. Below is the code used to subset FASTQ reads to the 65 spots selected in "subset.csv"



fastq1="SC2200092_WM4237-1-1337/fastq/SC2200092_GT22-04384_AGTTTCCTGG-CTGTGTGGCA_S2_L001_R1_001.fastq"fastq2="SC2200092_WM4237-1-1337/fastq/SC2200092_GT22-04384_AGTTTCCTGG-CTGTGTGGCA_S2_L001_R2_001.fastq"

fgrep -B 1 -f subset.csv ${fastq1} | grep "@" | cut -d' ' -f1 > readnames.list

seqtk subseq ${fastq1} <(cat readnames.list | cut -d '@' -f2) > subset_L001_R1_001.fastqseqtk subseq ${fastq2} <(cat readnames.list | cut -d '@' -f2) > subset_L001_R2_001.fastq

gzip -kv subset_L001_R1_001.fastqgzip -kv subset_L001_R2_001.fastq


The data includes output of STQ demo run.
DOI: 10.5281/zenodo.10654467
title: Demo 10x Visium dataset for STQ

description: The small dataset includes FASTQ files with 13,043,592 reads from 65 Visium spots of sample WM4237_TE_S1_ST. See https://doi.org/10.1101/2023.07.27.550727 for the full datasets details. Below is the code used to subset FASTQ reads to the 65 spots selected in "subset.csv"



fastq1="SC2200092_WM4237-1-1337/fastq/SC2200092_GT22-04384_AGTTTCCTGG-CTGTGTGGCA_S2_L001_R1_001.fastq"fastq2="SC2200092_WM4237-1-1337/fastq/SC2200092_GT22-04384_AGTTTCCTGG-CTGTGTGGCA_S2_L001_R2_001.fastq"

fgrep -B 1 -f subset.csv ${fastq1} | grep "@" | cut -d' ' -f1 > readnames.list

seqtk subseq ${fastq1} <(cat readnames.list | cut -d '@' -f2) > subset_L001_R1_001.fastqseqtk subseq ${fastq2} <(cat readnames.list | cut -d '@' -f2) > subset_L001_R2_001.fastq

gzip -kv subset_L001_R1_001.fastqgzip -kv subset_L001_R2_001.fastq


The data includes output of STQ demo run.
DOI: 10.25549/hhrohp-ouc112194093
title: Allan Maleche, interview, Nairobi, Kenya, 2022

description: Allan Maleche, Nairobi, Kenya, 2022 April 29, oral history interview, by Maylis Basturk, Los Angeles, California, USA. The inteview was conducted over the Internet (Zoom) as part of the Health and Human Rights Oral History Project, Institute on Inequalities in Global Health, University of Southern California, Los Angeles, California, USA.Allan Maleche is an advocate of the high court of Kenya and a human rights defender with over fifteen years of experience in law, ethics, governance, policy, health and rights, including eight years managing rights-based programs that protect affected, marginalized, and vulnerable populations. In this oral history interview, he recounts landmark cases pertaining to the unlawful incarceration of tuberculosis patients and the forced sterilization of women, as well as his broader work to advance HIV-related human rights in Kenya and his multiple roles held with The Global Fund to fight AIDS, Tuberculosis and Malaria. Maleche is currently Executive Director of Kenya Ethical & Legal Issues Network on HIV & AIDS (KELIN). He sits on and co-chairs the UNAIDS Human Rights Reference Group on HIV and Human Rights and is a member of the International Advisory Board for the Global Health Centre.
DOI: 10.25549/hhrohp-ouc112194089
title: Allan Maleche, interview, Nairobi, Kenya, 2022

description: Allan Maleche, Nairobi, Kenya, 2022 April 29, oral history interview, by Maylis Basturk, Los Angeles, California, USA. The inteview was conducted over the Internet (Zoom) as part of the Health and Human Rights Oral History Project, Institute on Inequalities in Global Health, University of Southern California, Los Angeles, California, USA.Allan Maleche is an advocate of the high court of Kenya and a human rights defender with over fifteen years of experience in law, ethics, governance, policy, health and rights, including eight years managing rights-based programs that protect affected, marginalized, and vulnerable populations. In this oral history interview, he recounts landmark cases pertaining to the unlawful incarceration of tuberculosis patients and the forced sterilization of women, as well as his broader work to advance HIV-related human rights in Kenya and his multiple roles held with The Global Fund to fight AIDS, Tuberculosis and Malaria. Maleche is currently Executive Director of Kenya Ethical & Legal Issues Network on HIV & AIDS (KELIN). He sits on and co-chairs the UNAIDS Human Rights Reference Group on HIV and Human Rights and is a member of the International Advisory Board for the Global Health Centre.
DOI: 10.25549/hhrohp-ouc112194088
title: Allan Maleche, interview, Nairobi, Kenya, 2022

description: Allan Maleche, Nairobi, Kenya, 2022 April 29, oral history interview, by Maylis Basturk, Los Angeles, California, USA. The inteview was conducted over the Internet (Zoom) as part of the Health and Human Rights Oral History Project, Institute on Inequalities in Global Health, University of Southern California, Los Angeles, California, USA.Allan Maleche is an advocate of the high court of Kenya and a human rights defender with over fifteen years of experience in law, ethics, governance, policy, health and rights, including eight years managing rights-based programs that protect affected, marginalized, and vulnerable populations. In this oral history interview, he recounts landmark cases pertaining to the unlawful incarceration of tuberculosis patients and the forced sterilization of women, as well as his broader work to advance HIV-related human rights in Kenya and his multiple roles held with The Global Fund to fight AIDS, Tuberculosis and Malaria. Maleche is currently Executive Director of Kenya Ethical & Legal Issues Network on HIV & AIDS (KELIN). He sits on and co-chairs the UNAIDS Human Rights Reference Group on HIV and Human Rights and is a member of the International Advisory Board for the Global Health Centre.
DOI: 10.6084/m9.figshare.7026512.v2
title: Neonatal respiratory outcomes in pregnancy induced hypertension: introducing a novel index

description: <b>Objective:</b> To evaluate short-term respiratory outcomes, mortality and bronchopulmonary dysplasia (BPD) in preterm infants born to mothers with and without pregnancy induced hypertension (PIH). <b>Methods:</b> Exposed infants &lt;33 weeks’ gestation were matched to controls in a 1:2 ratio, based on gestation, sex and antenatal steroid exposure in this retrospective cohort study. Primary outcomes were a novel cumulative respiratory index (cRI) (product of mean airway pressure-hours and FiO<sub>2</sub>-hours while on invasive ventilation during first 72 hours), mortality and BPD. <b>Results:</b> Seventy-nine exposed infants were matched with 158 controls. cRI was higher in exposed infants (median 1854; IQR 186–13,901) versus controls (median 1359; IQR 210–11,302) but not statistically significant (<i>p</i> = .63). On conditional regression analysis, PIH did not predict cRI (adjusted <i>β</i> = 0.96; 95% CI = 0.79–1.17; <i>p</i> = .712). No association between PIH and mortality (unadjusted odds ratio [OR] = 3.14; 95% CI = 0.76–13.0; <i>p</i>=.11) was identified. PIH was significantly associated with BPD on univariate analysis (OR = 2.29; 95% CI = 1.02–5.17; <i>p</i>=.046), but not after adjustment (aOR = 1.26; 95% CI = 0.38–4.19; <i>p</i>=.7). <b>Conclusions:</b> PIH was not associated with cRI, mortality or BPD in this study. Further validation of cRI and exploration of its relationship with PIH as well as neonatal outcomes is warranted.
DOI: 10.6084/m9.figshare.7026776.v1
title: Additional file 3: of In vivo evolution of drug-resistant Mycobacterium tuberculosis in patients during long-term treatment

description: Table S2. Detailed information of SNPs within four patients. (XLSX 14Â kb)
DOI: 10.25549/hhrohp-ouc112171119
title: Kathleen Foley, interview, New York, NY, 2022

description: Kathleen Foley, New York, New York, USA, 2022 April 29, oral history interview, by Jonathan Cohen, New York, New York, USA. The interview was conducted over the Internet (Zoom) as part of the Health and Human Rights Oral History Project, Institute on Inequalities in Global Health, University of Southern California, Los Angeles, California, USA.This oral history covers Dr. Kathleen (Kathy) Foley’s tenure as medical director of OSF's International Palliative Care Initiative, which funded international efforts to advance palliative care in low and middle-income countries. A neurologist and pioneer in the treatment of cancer pain, she has published over 350 papers related to her national and international clinical and research efforts in the clinical pharmacology of opioid drugs and a public health and human rights approach to access to pain relief. In this interview, she tells the origin story of how George Soros became a leading advocate and investor in the movement for palliative care, and how the International Palliative Care Initiative broke new ground in foregrounding end of life care and pain relief as a global human rights issue. She also discusses OSF’s work in Sub-Saharan Africa during the height of the HIV/AIDS epidemic, and grantmaking with the Central and Eastern European foundations to develop comprehensive palliative care strategies.
DOI: 10.25549/hhrohp-ouc112171160
title: Kathleen Foley, interview, New York, NY, 2022

description: Kathleen Foley, New York, New York, USA, 2022 April 29, oral history interview, by Jonathan Cohen, New York, New York, USA. The interview was conducted over the Internet (Zoom) as part of the Health and Human Rights Oral History Project, Institute on Inequalities in Global Health, University of Southern California, Los Angeles, California, USA.This oral history covers Dr. Kathleen (Kathy) Foley’s tenure as medical director of OSF's International Palliative Care Initiative, which funded international efforts to advance palliative care in low and middle-income countries. A neurologist and pioneer in the treatment of cancer pain, she has published over 350 papers related to her national and international clinical and research efforts in the clinical pharmacology of opioid drugs and a public health and human rights approach to access to pain relief. In this interview, she tells the origin story of how George Soros became a leading advocate and investor in the movement for palliative care, and how the International Palliative Care Initiative broke new ground in foregrounding end of life care and pain relief as a global human rights issue. She also discusses OSF’s work in Sub-Saharan Africa during the height of the HIV/AIDS epidemic, and grantmaking with the Central and Eastern European foundations to develop comprehensive palliative care strategies.
DOI: 10.25549/hhrohp-ouc112171118
title: Kathleen Foley, interview, New York, NY, 2022

description: Kathleen Foley, New York, New York, USA, 2022 April 29, oral history interview, by Jonathan Cohen, New York, New York, USA. The interview was conducted over the Internet (Zoom) as part of the Health and Human Rights Oral History Project, Institute on Inequalities in Global Health, University of Southern California, Los Angeles, California, USA.This oral history covers Dr. Kathleen (Kathy) Foley’s tenure as medical director of OSF's International Palliative Care Initiative, which funded international efforts to advance palliative care in low and middle-income countries. A neurologist and pioneer in the treatment of cancer pain, she has published over 350 papers related to her national and international clinical and research efforts in the clinical pharmacology of opioid drugs and a public health and human rights approach to access to pain relief. In this interview, she tells the origin story of how George Soros became a leading advocate and investor in the movement for palliative care, and how the International Palliative Care Initiative broke new ground in foregrounding end of life care and pain relief as a global human rights issue. She also discusses OSF’s work in Sub-Saharan Africa during the height of the HIV/AIDS epidemic, and grantmaking with the Central and Eastern European foundations to develop comprehensive palliative care strategies.
DOI: 10.5281/zenodo.10644371
title: Global Change - Assessment 1

description:  




This dataset was compiled in order to compare the critical thermal maxiumum in different species of fish from the classes, Chondrichthyes and Actinopterygii.
 
 


In order to collate this data a literature search was carried out using web of science and google scholar. Relevant data was found by using several search phrases 
 
 


('chondrichthyes critical thermal maximum', 'actinopterygii critical thermal maximum') and a number of key words ('Critical thermal maximum', 'CTmaxima', 'Thermal tolerance')
 


This trait was picked as with rising sea temperatures it would be interesting to see how heat tolerant a range of species are across the world, looking at this data spatially
 


may also highlight areas of more tolerant fish or those that are more vulnerable to greater water temperatures. Critical thermal maximum was chosen  
 
 


as the unit of measurement as this is a common metric used in a wide range of studies meaning it can easily be used to compare data from seperarate studies.
DOI: 10.5281/zenodo.10644372
title: Global Change - Assessment 1

description:  




This dataset was compiled in order to compare the critical thermal maxiumum in different species of fish from the classes, Chondrichthyes and Actinopterygii.
 
 


In order to collate this data a literature search was carried out using web of science and google scholar. Relevant data was found by using several search phrases 
 
 


('chondrichthyes critical thermal maximum', 'actinopterygii critical thermal maximum') and a number of key words ('Critical thermal maximum', 'CTmaxima', 'Thermal tolerance')
 


This trait was picked as with rising sea temperatures it would be interesting to see how heat tolerant a range of species are across the world, looking at this data spatially
 


may also highlight areas of more tolerant fish or those that are more vulnerable to greater water temperatures. Critical thermal maximum was chosen  
 
 


as the unit of measurement as this is a common metric used in a wide range of studies meaning it can easily be used to compare data from seperarate studies.
DOI: 10.25549/hhrohp-ouc112171117
title: Kathleen Foley, interview, New York, NY, 2022

description: Kathleen Foley, New York, New York, USA, 2022 April 29, oral history interview, by Jonathan Cohen, New York, New York, USA. The interview was conducted over the Internet (Zoom) as part of the Health and Human Rights Oral History Project, Institute on Inequalities in Global Health, University of Southern California, Los Angeles, California, USA.This oral history covers Dr. Kathleen (Kathy) Foley’s tenure as medical director of OSF's International Palliative Care Initiative, which funded international efforts to advance palliative care in low and middle-income countries. A neurologist and pioneer in the treatment of cancer pain, she has published over 350 papers related to her national and international clinical and research efforts in the clinical pharmacology of opioid drugs and a public health and human rights approach to access to pain relief. In this interview, she tells the origin story of how George Soros became a leading advocate and investor in the movement for palliative care, and how the International Palliative Care Initiative broke new ground in foregrounding end of life care and pain relief as a global human rights issue. She also discusses OSF’s work in Sub-Saharan Africa during the height of the HIV/AIDS epidemic, and grantmaking with the Central and Eastern European foundations to develop comprehensive palliative care strategies.
DOI: 10.6084/m9.figshare.19609595
title: The pathological involvement of spinal cord EphB2 in visceral sensitization in male rats

description: Patients with post-traumatic stress disorder (PTSD) are usually at an increased risk for chronic disorders, such as irritable bowel syndrome (IBS), characterized by hyperalgesia and allodynia, but its subsequent effect on visceral hyperalgesia and the mechanism remain unclear. The present study employed single prolonged stress (SPS), a model of PTSD-pain comorbidity, behavioral evaluation, intrathecal drug delivery, immunohistochemistry, Western blotting, and RT-PCR techniques. When detecting visceral sensitivity, the score of the abdominal withdrawal reflex (AWR) induced by graded colorectal distention (CRD) was used. The AWR score was reduced in the SPS day 1 group but increased in the SPS day 7 and SPS day 14 groups at 40 mmHg and 60 mmHg, and the score was increased significantly with EphrinB1-Fc administration. The EphB2+ cell density and EphB2 protein and mRNA levels were downregulated in the SPS day 1 group and then upregulated significantly in the SPS day 7 group; these changes were more noticeable with EphrinB1-Fc administration compared with the SPS-only group. The C-Fos-positive reaction induced by SPS was mainly localized in neurons of the spinal dorsal horn, in which the C-Fos-positive cell density and its protein and mRNA levels were upregulated on SPS days 7 and 14; these changes were statistically significant in the SPS + EphrinB1-Fc group compared with the SPS alone group. The present study confirmed the time window for the AWR value, EphB2 and C-Fos changes, and the effect of EphrinB1-Fc on these changes, which suggests that spinal cord EphB2 activation exacerbates visceral pain after SPS.
DOI: 10.25549/hhrohp-ouc112171116
title: Kathleen Foley, interview, New York, NY, 2022

description: Kathleen Foley, New York, New York, USA, 2022 April 29, oral history interview, by Jonathan Cohen, New York, New York, USA. The interview was conducted over the Internet (Zoom) as part of the Health and Human Rights Oral History Project, Institute on Inequalities in Global Health, University of Southern California, Los Angeles, California, USA.This oral history covers Dr. Kathleen (Kathy) Foley’s tenure as medical director of OSF's International Palliative Care Initiative, which funded international efforts to advance palliative care in low and middle-income countries. A neurologist and pioneer in the treatment of cancer pain, she has published over 350 papers related to her national and international clinical and research efforts in the clinical pharmacology of opioid drugs and a public health and human rights approach to access to pain relief. In this interview, she tells the origin story of how George Soros became a leading advocate and investor in the movement for palliative care, and how the International Palliative Care Initiative broke new ground in foregrounding end of life care and pain relief as a global human rights issue. She also discusses OSF’s work in Sub-Saharan Africa during the height of the HIV/AIDS epidemic, and grantmaking with the Central and Eastern European foundations to develop comprehensive palliative care strategies.
DOI: 10.25549/hhrohp-ouc1sto1699813
title: The Health and Human Rights Oral History Project
DOI: 10.25549/hhrohp-ouc1sto1699811
title: The Health and Human Rights Oral History Project
DOI: 10.25549/hhrohp-ouc1sto1699809
title: The Health and Human Rights Oral History Project
DOI: 10.25549/hhrohp-ouc1sto1699807
title: The Health and Human Rights Oral History Project
DOI: 10.25549/hhrohp-ouc1sto1699805
title: The Health and Human Rights Oral History Project
DOI: 10.25549/hhrohp-ouc1sto1699803
title: The Health and Human Rights Oral History Project
DOI: 10.6084/m9.figshare.14525987
title: Additional file 2 of Genome-wide analysis of ATP-binding cassette transporter provides insight to genes related to bioactive metabolite transportation in Salvia miltiorrhiza

description: Additional file 2: Table S1. The ABC transporters that have been functionally identified from other plants used for phylogenetic tree analysis in this study (sheet 1) and the accession numbers of SmABCs deposited in the GenBank (sheet 2)
DOI: 10.3535/01s-n86-3nh
title: Arctiinae Leach, 1815

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/96l-bf3-tx0
title: Syntomiini

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.