cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5781462
title: How to Build an Image Processing Pipeline for Automating Multiparameter Histocytometry Analysis

description: Image files for evaluation of an upcoming Current Protocols submission, as well as associated reference files.
DOI: 10.5281/zenodo.5768827
title: How to Build an Image Processing Pipeline for Automating Multiparameter Histocytometry Analysis

description: Image files for evaluation of an upcoming Current Protocols submission, as well as associated reference files.
DOI: 10.17909/3sy1-zm28
title: Eps Eri Coronal Dimming of Fe Lines from CMEs 

description: Data analyzed in the 2022 paper developing the technique of using the Fe XII (1238, 1349 Å) and Fe XXI (1354 Å) lines to search for signals of coronal dimming from CMEs.
DOI: 10.5281/zenodo.5115549
title: Block Tectonics across Western Tibet and Multi-Millennial Recurrence of Great Earthquakes on the Karakax Fault

description: <strong>Table 1</strong>: Analytical results of <sup>10</sup>Be and <sup>26</sup>Al geochronology and surface-exposure ages at Taersa site along Karakax fault. LMC.las = UAV point cloud data of the offset shoreline along the Longmu Co fault KXF.txt = LiDAR x-y-z data of the Taersa site
DOI: 10.5281/zenodo.5112603
title: Block Tectonics across Western Tibet and Multi-Millennial Recurrence of Great Earthquakes on the Karakax Fault

description: <strong>Table 1</strong>: Analytical results of <sup>10</sup>Be and <sup>26</sup>Al geochronology and surface-exposure ages at Taersa site along Karakax fault. LMC.las = UAV point cloud data of the offset shoreline along the Longmu Co fault KXF.txt = LiDAR x-y-z data of the Taersa site
DOI: 10.6084/m9.figshare.17203964
title: Seismic Source Signatures Variation during the Propagation : Tsunami Resonance Characterization due to Trans-Pacific Sources

description: GEBCO bathymetry with 0.15 arc min resolution.Lon 130º - 290º Lat -55º - 50º
DOI: 10.6084/m9.figshare.17203964.v1
title: Seismic Source Signatures Variation during the Propagation : Tsunami Resonance Characterization due to Trans-Pacific Sources

description: GEBCO bathymetry with 0.15 arc min resolution.Lon 130º - 290º Lat -55º - 50º
DOI: 10.5281/zenodo.5778943
title: Timeseries of lake margin, lake area, water level, mascon solutions of Lago Greve

description: These are the dataset of timeseries of lake extent, lake area, water level, and mass around the lake, of Lago Greve presented in the study. 1. Lake extent<br> Filename: LagoGreve.shp<br> Note: LagoGreve.cpg, LagoGreve.dbf, LagoGreve.prj, LagoGreve.shx are also needed. 2. Timeseries of lake area<br> Filename: LakeArea_LagoGreve.csv 3. Timeseries of water level<br> Filename: Lakelevel_LagoGreve.csv 4. Timeseries of grace mascon solution<br> Filename: MeanMasconLagoGreve_CSRv06.csv 5. Fitting model for mascon solution<br> Filename: MeanMasconFitting.csv
DOI: 10.6084/m9.figshare.17203883
title: Integrated data with raw counts

description: This dataset contains the integrated and identified seurat object used in the paper's analyses. It has been scrubbed of normalized data and only contains the raw counts and cell metadata. <br><br>Raw data from the original studies can be found at GSE145926 and https:/www.covid19cellatlas.org/#wilk20<br>
DOI: 10.5517/ccdc.csd.cc2556bx
title: CCDC 2000998: Experimental Crystal Structure Determination

description: Related Article: Alexander Schmer, Dhanushi Welideniya, Tatjana Terschüren, Gregor Schnakenburg, Jörg Daniels, Antonio Bauza, Antonio Frontera, Rainer Streubel|2021|Dalton Trans.|50|17892|doi:10.1039/D1DT03350F
DOI: 10.5517/ccdc.csd.cc294jhh
title: CCDC 2119516: Experimental Crystal Structure Determination

description: Related Article: Han Vinh Huynh, Hong Lee Ong, Kausani Ghatak|2021|Dalton Trans.|50|18118|doi:10.1039/D1DT03714E
DOI: 10.5517/ccdc.csd.cc294jjj
title: CCDC 2119517: Experimental Crystal Structure Determination

description: Related Article: Han Vinh Huynh, Hong Lee Ong, Kausani Ghatak|2021|Dalton Trans.|50|18118|doi:10.1039/D1DT03714E
DOI: 10.5517/ccdc.csd.cc294jkk
title: CCDC 2119518: Experimental Crystal Structure Determination

description: Related Article: Han Vinh Huynh, Hong Lee Ong, Kausani Ghatak|2021|Dalton Trans.|50|18118|doi:10.1039/D1DT03714E
DOI: 10.5517/ccdc.csd.cc294jll
title: CCDC 2119519: Experimental Crystal Structure Determination

description: Related Article: Han Vinh Huynh, Hong Lee Ong, Kausani Ghatak|2021|Dalton Trans.|50|18118|doi:10.1039/D1DT03714E
DOI: 10.5517/ccdc.csd.cc294jmm
title: CCDC 2119520: Experimental Crystal Structure Determination

description: Related Article: Han Vinh Huynh, Hong Lee Ong, Kausani Ghatak|2021|Dalton Trans.|50|18118|doi:10.1039/D1DT03714E
DOI: 10.5517/ccdc.csd.cc294jnn
title: CCDC 2119521: Experimental Crystal Structure Determination

description: Related Article: Han Vinh Huynh, Hong Lee Ong, Kausani Ghatak|2021|Dalton Trans.|50|18118|doi:10.1039/D1DT03714E
DOI: 10.5517/ccdc.csd.cc294jpp
title: CCDC 2119522: Experimental Crystal Structure Determination

description: Related Article: Han Vinh Huynh, Hong Lee Ong, Kausani Ghatak|2021|Dalton Trans.|50|18118|doi:10.1039/D1DT03714E
DOI: 10.5517/ccdc.csd.cc294jqq
title: CCDC 2119523: Experimental Crystal Structure Determination

description: Related Article: Han Vinh Huynh, Hong Lee Ong, Kausani Ghatak|2021|Dalton Trans.|50|18118|doi:10.1039/D1DT03714E
DOI: 10.5517/ccdc.csd.cc294ny2
title: CCDC 2119654: Experimental Crystal Structure Determination

description: Related Article: Dong Yan, En Lin, Fazheng Jin, Shan Qiao, Yi Yang, Zhifang Wang, Fanhao Xiong, Yao Chen, Peng Cheng, Zhenjie Zhang|2021|J.Mater.Chem.A|9|27434|doi:10.1039/D1TA07810K
DOI: 10.5517/ccdc.csd.cc28g250
title: CCDC 2098891: Experimental Crystal Structure Determination

description: Related Article: Fei Xu, Gang-Mei Li, A-Ni Wang, Song-De Han, Jie Pan, Guo-Ming Wang|2021|Dalton Trans.|50|18089|doi:10.1039/D1DT02899E
DOI: 10.5517/ccdc.csd.cc27gbjl
title: CCDC 2069359: Experimental Crystal Structure Determination

description: Related Article: Shu-Ju Wang, Zhi-Qing Zhang, Yi-Hui Jiang, Gang Xiong, Li-Xin You, Fu Ding, Ileana Dragutan, Valerian Dragutan, Ya-Guang Sun|2022|Inorg.Chim.Acta|531|120712|doi:10.1016/j.ica.2021.120712
DOI: 10.5517/ccdc.csd.cc28sv53
title: CCDC 2109245: Experimental Crystal Structure Determination

description: Related Article: Ning Wang, Bing-Fan Long, Xian-Hong Yin, Zhong-jing Huang, Yan Mi, Fei-Long Hu, David James Young|2021|Dalton Trans.|50|18194|doi:10.1039/D1DT03405G
DOI: 10.5517/ccdc.csd.cc28sv64
title: CCDC 2109246: Experimental Crystal Structure Determination

description: Related Article: Ning Wang, Bing-Fan Long, Xian-Hong Yin, Zhong-jing Huang, Yan Mi, Fei-Long Hu, David James Young|2021|Dalton Trans.|50|18194|doi:10.1039/D1DT03405G
DOI: 10.5517/ccdc.csd.cc28sv75
title: CCDC 2109247: Experimental Crystal Structure Determination

description: Related Article: Ning Wang, Bing-Fan Long, Xian-Hong Yin, Zhong-jing Huang, Yan Mi, Fei-Long Hu, David James Young|2021|Dalton Trans.|50|18194|doi:10.1039/D1DT03405G
DOI: 10.5517/ccdc.csd.cc28sv86
title: CCDC 2109248: Experimental Crystal Structure Determination

description: Related Article: Ning Wang, Bing-Fan Long, Xian-Hong Yin, Zhong-jing Huang, Yan Mi, Fei-Long Hu, David James Young|2021|Dalton Trans.|50|18194|doi:10.1039/D1DT03405G
DOI: 10.5517/ccdc.csd.cc28g261
title: CCDC 2098892: Experimental Crystal Structure Determination

description: Related Article: Fei Xu, Gang-Mei Li, A-Ni Wang, Song-De Han, Jie Pan, Guo-Ming Wang|2021|Dalton Trans.|50|18089|doi:10.1039/D1DT02899E
DOI: 10.5517/ccdc.csd.cc28g272
title: CCDC 2098893: Experimental Crystal Structure Determination

description: Related Article: Fei Xu, Gang-Mei Li, A-Ni Wang, Song-De Han, Jie Pan, Guo-Ming Wang|2021|Dalton Trans.|50|18089|doi:10.1039/D1DT02899E
DOI: 10.5517/ccdc.csd.cc27h0xp
title: CCDC 2070022: Experimental Crystal Structure Determination

description: Related Article: Maite Nößler, David Hunger, Felix Reichert, Mario Winkler, Marc Reimann, Johannes Klein, Simon Suhr, Lisa Suntrup, Julia Beerhues, Martin Kaupp, Joris van Slageren, Biprajit Sarkar|2021|Dalton Trans.|50|18097|doi:10.1039/D1DT03535E
DOI: 10.5517/ccdc.csd.cc27hd9g
title: CCDC 2070375: Experimental Crystal Structure Determination

description: Related Article: Maite Nößler, David Hunger, Felix Reichert, Mario Winkler, Marc Reimann, Johannes Klein, Simon Suhr, Lisa Suntrup, Julia Beerhues, Martin Kaupp, Joris van Slageren, Biprajit Sarkar|2021|Dalton Trans.|50|18097|doi:10.1039/D1DT03535E
DOI: 10.5517/ccdc.csd.cc27h1g8
title: CCDC 2070039: Experimental Crystal Structure Determination

description: Related Article: Maite Nößler, David Hunger, Felix Reichert, Mario Winkler, Marc Reimann, Johannes Klein, Simon Suhr, Lisa Suntrup, Julia Beerhues, Martin Kaupp, Joris van Slageren, Biprajit Sarkar|2021|Dalton Trans.|50|18097|doi:10.1039/D1DT03535E
DOI: 10.5517/ccdc.csd.cc27h0rj
title: CCDC 2070017: Experimental Crystal Structure Determination

description: Related Article: Maite Nößler, David Hunger, Felix Reichert, Mario Winkler, Marc Reimann, Johannes Klein, Simon Suhr, Lisa Suntrup, Julia Beerhues, Martin Kaupp, Joris van Slageren, Biprajit Sarkar|2021|Dalton Trans.|50|18097|doi:10.1039/D1DT03535E
DOI: 10.5517/ccdc.csd.cc25qy3z
title: CCDC 2018041: Experimental Crystal Structure Determination

description: Related Article: Chenyang Ma, Claire Besson|2021|Dalton Trans.|50|18077|doi:10.1039/D1DT03445F
DOI: 10.5517/ccdc.csd.cc25q4km
title: CCDC 2017280: Experimental Crystal Structure Determination

description: Related Article: Chenyang Ma, Claire Besson|2021|Dalton Trans.|50|18077|doi:10.1039/D1DT03445F
DOI: 10.25442/hku.17104301
title: Supporting data for "Inverted stream channels in the western Qaidam basin, northern Tibetan plateau, and implications to martian inverted landforms"

description: This data file is used for supporting the thesis submission. For a clear understanding of the architecture of Inverted stream channels in western Qaidam Basin, the differential Global Positioning System (DGPS) data was acquired in the field trip, the corresponding data is save in the folder Differential GPS. The DGPS data was used to calculate the channel ridge and general terrain gradients. The drone measured elevation data is saved in the Folder ISC DEM. These data sets were used to construct the digital elevation models and 3D models of inverted stream channels. During the field trip, the gravel grains that distributed on top of the inverted channels were randomly collected and analyzed. The corresponding data is save in the folder Grain Analysis. These grain analysis data was used for reconstruction of paleo-discharge of the selected inverted stream channels. The drone photos that include the overall morphology and distribution of inverted stream channels are saved in the folder Field Imagery. The folder Statistical Analysis includes the channel length data that measured from Google Earth, as well as the channel sinuosity data.<br>
DOI: 10.25442/hku.17104301.v1
title: Supporting data for "Inverted stream channels in the western Qaidam basin, northern Tibetan plateau, and implications to martian inverted landforms"

description: This data file is used for supporting the thesis submission. For a clear understanding of the architecture of Inverted stream channels in western Qaidam Basin, the differential Global Positioning System (DGPS) data was acquired in the field trip, the corresponding data is save in the folder Differential GPS. The DGPS data was used to calculate the channel ridge and general terrain gradients. The drone measured elevation data is saved in the Folder ISC DEM. These data sets were used to construct the digital elevation models and 3D models of inverted stream channels. During the field trip, the gravel grains that distributed on top of the inverted channels were randomly collected and analyzed. The corresponding data is save in the folder Grain Analysis. These grain analysis data was used for reconstruction of paleo-discharge of the selected inverted stream channels. The drone photos that include the overall morphology and distribution of inverted stream channels are saved in the folder Field Imagery. The folder Statistical Analysis includes the channel length data that measured from Google Earth, as well as the channel sinuosity data.<br>
DOI: 10.6084/m9.figshare.17204018
title: DataforPlotingFigures.xlsx

description: This database is for the review paper "Nature-based framework for sustainable afforestation in global drylands under changing climate".
DOI: 10.25442/hku.17126336
title: Supporting data for "Screening and characterization of pharmacologically active compounds regulating embryo implantation in vitro and in vivo"

description: This Dataset files are the main resource materials for Chapter 2 (optimization, raw data and design analysis) and Chapter 3 (screening and confirmation) and Chapter 4 (animal model and confirmation) in my PhD thesis. The sub-folders were named after the figures represented in the thesis. And each file was named after the related figure represented in the thesis. Files include all raw and analysis data from microscope and plate reader. Analysis was done by Prism or Image J software.
DOI: 10.25442/hku.17126336.v1
title: Supporting data for "Screening and characterization of pharmacologically active compounds regulating embryo implantation in vitro and in vivo"

description: This Dataset files are the main resource materials for Chapter 2 (optimization, raw data and design analysis) and Chapter 3 (screening and confirmation) and Chapter 4 (animal model and confirmation) in my PhD thesis. The sub-folders were named after the figures represented in the thesis. And each file was named after the related figure represented in the thesis. Files include all raw and analysis data from microscope and plate reader. Analysis was done by Prism or Image J software.
DOI: 10.25442/hku.17132366
title: Supporting data for “Microbial Responses to Ocean Deoxygenation”.

description: These files contain all of the data presented in chapters from MPhil thesis entitled "Microbial Responses to Ocean Deoxygenation". Data are separated into three different files according to their categories. The "Geochemical data" file contains values of chlorophyll a, ammonium, nitrous oxides, and phosphate concentrations in seawater samples collected from coastal water at Aberdeen, Hong Kong. The "Microbiological data" file contains data yielded from microbial communities in coastal waters at Aberdeen, Hong Kong, including DNA concentrations, DNA sequences, operational taxonomic unites of the communities, and the diversity indices. In addition, cell density data collected from growth experiments of Saccharomyces cerevisiae are also included in this file. The "Respiration data" file contains respiration kinetics calculated from incubation experiments of Escherichia coli, Ruegeria pomeroyi, Saccharomyces cerevisiae, and coastal microbial communities at Aberdeen, Hong Kong. Data are generated from environmental samples and pure microbial cultures, which without revealing any sensitive and confidential contents.
DOI: 10.25442/hku.17132366.v1
title: Supporting data for “Microbial Responses to Ocean Deoxygenation”.

description: These files contain all of the data presented in chapters from MPhil thesis entitled "Microbial Responses to Ocean Deoxygenation". Data are separated into three different files according to their categories. The "Geochemical data" file contains values of chlorophyll a, ammonium, nitrous oxides, and phosphate concentrations in seawater samples collected from coastal water at Aberdeen, Hong Kong. The "Microbiological data" file contains data yielded from microbial communities in coastal waters at Aberdeen, Hong Kong, including DNA concentrations, DNA sequences, operational taxonomic unites of the communities, and the diversity indices. In addition, cell density data collected from growth experiments of Saccharomyces cerevisiae are also included in this file. The "Respiration data" file contains respiration kinetics calculated from incubation experiments of Escherichia coli, Ruegeria pomeroyi, Saccharomyces cerevisiae, and coastal microbial communities at Aberdeen, Hong Kong. Data are generated from environmental samples and pure microbial cultures, which without revealing any sensitive and confidential contents.
DOI: 10.25442/hku.17134262
title: Neuron-astroglial communication: Exosomal heparanase isoforms released from astrocyte modulate synaptic strength

description: This files contains data to support the following experimental results:Results presented in this study provide evidences that heparanase 2 and astrocytes heparanase associated ADEV in response to NMDA stimulation exhibit inhibitory effect to synaptic plasticity by enhancing the bulk internalization of surface AMPA receptors and Syndecan 3 from the neuronal surface. This study is also the first time revealing the microstructure of heparanase associated exosome derived from astrocyte.
DOI: 10.25442/hku.17134262.v1
title: Neuron-astroglial communication: Exosomal heparanase isoforms released from astrocyte modulate synaptic strength

description: This files contains data to support the following experimental results:Results presented in this study provide evidences that heparanase 2 and astrocytes heparanase associated ADEV in response to NMDA stimulation exhibit inhibitory effect to synaptic plasticity by enhancing the bulk internalization of surface AMPA receptors and Syndecan 3 from the neuronal surface. This study is also the first time revealing the microstructure of heparanase associated exosome derived from astrocyte.
DOI: 10.6084/m9.figshare.17203928
title: Integrated data with normalized counts

description: This dataset contains the integrated and identified seurat object used in the paper's analyses. It contains both raw and normalized counts as well as cell level metadata and facilitates direct analysis.<br><br>Raw data from the original studies can be found at GSE145926 and https:/www.covid19cellatlas.org/#wilk20
DOI: 10.25952/bthq-5q25
title: Using Referential Alarm Signals to Remotely Quantify 'Landscapes of Fear' in Fragmented Woodland

description: These data are derived from both automated and manual screening of passive acoustic monitoring data collected using SM2+ recorders placed in woodland fragments in and around the Armidale region. The focal species of interest was the Noisy Miner (Manorina melanocephala), and three different call types were quantified using the species functionally referential signals: chip (social calls), chur (ground predator) and aerial (aerial predator) vocalisations. These data were then used to assess encounters with perceived predators in both different sized fragments and also locations within or on the edge of these habitats. Together, these were then used to infer the landscape of fear remotely in this system.
description: These data are derived from both automated and manual screening of passive acoustic monitoring data collected using SM2+ recorders placed in woodland fragments in and around the Armidale region. The focal species of interest was the Noisy Miner (Manorina melanocephala), and three different call types were quantified using the species functionally referential signals: chip (social calls), chur (ground predator) and aerial (aerial predator) vocalisations. These data were then used to assess encounters with perceived predators in both different sized fragments and also locations within or on the edge of these habitats. Together, these were then used to infer the landscape of fear remotely in this system.
DOI: 10.5281/zenodo.5781848
title: Data and output files for the paper, "Dynamical systems inference at scale reveals intrinsic instability in the dysbiotic microbiome"

description: The above files contain the output of the model, which we call MDSINE2, developed in the paper titled, "<em>Dynamical systems inference at scale reveals intrinsic instability in the dysbiotic microbiome</em>" (See https://github.com/gerberlab/MDSINE2_Paper for implementation details). More specifically, forward_sims.tgz contains the output of forward simulations in .npy format; mixed_prior_fixed.tgz contains the pickle files corresponding to the output of the MCMC simulations for fixed topology; mixed_prior_unfixed.tgz contains the pickle files corresponding to the output of the MCMC simulations for unfixed topology; other_files contains information on eigenvalues and cycles, results for Phylogenetic Neighborhood Analysis, Keystoneness Analysis and the output in .npy format for comparator methods; ASV_OTU_aggregate_and_plylogeneteic trees contains the plots of trajectories (relative abundance) of OTUS and their constituent ASVs, and of phylogenetic trees.
description: The files can be used to produce the figures in the paper without having to run the full model.
DOI: 10.5281/zenodo.5527256
title: Data and output files for the paper, "Dynamical systems inference at scale reveals intrinsic instability in the dysbiotic microbiome"

description: The above files contain the output of the model, which we call MDSINE2, developed in the paper titled, "<em>Dynamical systems inference at scale reveals intrinsic instability in the dysbiotic microbiome</em>" (See https://github.com/gerberlab/MDSINE2_Paper for implementation details). More specifically, forward_sims.tgz contains the output of forward simulations in .npy format; mixed_prior_fixed.tgz contains the pickle files corresponding to the output of the MCMC simulations for fixed topology; mixed_prior_unfixed.tgz contains the pickle files corresponding to the output of the MCMC simulations for unfixed topology; other_files contains information on eigenvalues and cycles, results for Phylogenetic Neighborhood Analysis, Keystoneness Analysis and the output in .npy format for comparator methods; ASV_OTU_aggregate_and_plylogeneteic trees contains the plots of trajectories (relative abundance) of OTUS and their constituent ASVs, and of phylogenetic trees.
description: The files can be used to produce the figures in the paper without having to run the full model.
DOI: 10.4121/17081387.v1
title: Metadataoverzicht bij evaluatie van bestaande maatregel-effectrapporten om de ecologische status van het oppervlaktewater te verbeteren

description: Dit rapport bekijkt maatregel-effectstudies van 2008-2019, en richt zich op maatregelen die in en rond het oppervlaktewater worden genomen om de ecologische status van het oppervlaktewater te verbeteren.<br>Deze rapporten werden getoetst op bruikbaarheid voor de onderbouwing van uitspraken over maatregeleffectiviteit.<br>Voor elk rapport zijn onder andere de titel, auteurs, bron, publicatiejaar, watertype, onderzoeksmethode, onderzochte parameter en onderzochte biologische groep genoteerd.
DOI: 10.4121/17081387
title: Metadataoverzicht bij evaluatie van bestaande maatregel-effectrapporten om de ecologische status van het oppervlaktewater te verbeteren

description: Dit rapport bekijkt maatregel-effectstudies van 2008-2019, en richt zich op maatregelen die in en rond het oppervlaktewater worden genomen om de ecologische status van het oppervlaktewater te verbeteren.<br>Deze rapporten werden getoetst op bruikbaarheid voor de onderbouwing van uitspraken over maatregeleffectiviteit.<br>Voor elk rapport zijn onder andere de titel, auteurs, bron, publicatiejaar, watertype, onderzoeksmethode, onderzochte parameter en onderzochte biologische groep genoteerd.