cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7898615.v1
title: PUBLIC INTEREST VERSUS FORESTS

description: ABSTRACT This article analyses role of the concept of “public interest” in forest management, governance and conservation in Turkey and seeks to obtain an insight into the “public interest” through exploring the permit process given by the State, and to help better understanding the roots of current issues. An institutional approach will be followed and various formal and informal legislation will be explored in their complex and dynamic interplay, which leads and shapes practices on the ground and resulting outcomes. The purpose of this paper is to bring some new perspectives to the debate about the proper balance between economic development policies and forest protection. It is also hypothesized that the concept of “public interest” could increase and lead deforestation through legislation. It first explains the theoretical framework on resource management, forest policy, and public interest. This general overview is followed by a more in-depth analysis of the role that public interest plays in deforestation via the permit process in the State forests. Turkey has lost irrevocably an area of 654.833 hectares in the State forests via the 94.148 permits granted. This analysis of public interest confirms that it is important to avoid legislation that overreaches. The concept of public interest may exceed implementation capacity (i.e., there may be an imbalance between the activities, procedures and institutional arrangements prescribed by legislation and high court decisions). Re-organization of decision-making mechanisms/process with a more participative approach is an important step toward achieving good governance and sustainability of the forest resources.
DOI: 10.6084/m9.figshare.7898606
title: What matters in free listing? A probabilistic interpretation of the salience index

description: ABSTRACT Free listing is a data collection technique used in different subject areas to characterize a given cultural domain. Analysis of a set of lists from a human population allows inferences to be made about the cultural salience of the items in that domain. However, the challenge that the salience index presents is establishing a threshold value for determining whether an item can be considered salient or not. The present analysis reveals how to determine which items of a list have non-randomly determined citation frequency and order. Monte Carlo techniques were used to create a hypothetical null scenario. The present analysis not only objectively identifies which items stand out in relation to the others, it also reveals which items can be considered idiosyncratic and how order and frequency independently influence the salience index. The present analysis represents a useful tool for analyzing data collected through free listing. It also can contribute to understanding processes related to the cultural relevance of items and to the test future hypotheses in different areas of knowledge.
DOI: 10.6084/m9.figshare.7898609
title: Defining characteristics and related factors of the nursing diagnosis for ineffective breathing pattern

description: ABSTRACT Objective: To identify in the literature the defining characteristics and related factors of the nursing diagnosis "ineffective breathing pattern". Method: Integrative review with the steps: problem identification, literature search, evaluation and analysis of data and presentation of results. Results: Twenty articles and two dissertations were included. In children, the most prevalent related factor was bronchial secretion, followed by hyperventilation. The main defining characteristics were dyspnea, tachypnea, cough, use of accessory muscles to breathe, orthopnea and adventitious breath sounds. Bronchial secretion, cough and adventitious breath sounds are not included in the NANDA-International (NANDA-I). For adults and older adults, the related factors were fatigue, pain and obesity and the defining characteristics were dyspnea, orthopnea and tachypnea. Conclusion: This diagnosis manifests differently according to the patients’ age group. It was observed that some defining characteristics and related factors are not included in the NANDA-I. Their inclusion can improve this nursing diagnosis.
DOI: 10.6084/m9.figshare.7898612
title: Biological significance of miR-126 expression in atrial fibrillation and heart failure

description: We investigated the biological significance of microRNA-126 (miR-126) expression in patients with atrial fibrillation (AF) and/or heart failure (HF) to examine the possible mechanism of miR-126-dependent AF and development of HF. A total of 103 patients were divided into three groups: AF group (18 men and 17 women, mean age: 65.62±12.72 years), HF group (17 men and 15 women, mean age: 63.95±19.71 years), and HF-AF group (20 men and 16 women, mean age: 66.56±14.37 years). Quantitative real-time PCR was used to measure relative miR-126 expression as calculated by the 2−ΔΔCt method. miR-126 was frequently downregulated in the 3 patient groups compared with controls. This reduction was significantly lower in permanent and persistent AF patients than in those with paroxysmal AF (P&lt;0.05, t-test). Moreover, miR-126 expression was markedly lower in the HF-AF group compared with the AF and HF groups. The 3 patient groups had higher N-terminal prohormone brain natriuretic peptide (NT-proBNP) levels, lower left ventricular ejection fraction (LVEF), larger left atrial diameter, and higher cardiothoracic ratio compared with controls. There were significant differences in NT-proBNP levels and LVEF among the AF, HF, and HF-AF groups. Pearson correlation analysis showed that relative miR-126 expression was positively associated with LVEF, logarithm of NT-proBNP, left atrial diameter, cardiothoracic ratio, and age in HF-AF patients. Multiple linear regression analysis showed that miR-126 expression was positively correlated with LVEF, but negatively correlated with the logarithm of NT-pro BNP and the cardiothoracic ratio (all P&lt;0.05). Serum miR-126 levels could serve as a potential candidate biomarker for evaluating the severity of AF and HF. However, to confirm these results, future studies with a larger and diverse patient population are necessary.
DOI: 10.6084/m9.figshare.7898624.v1
title: The consensus sequence of FAMLF alternative splice variants is overexpressed in undifferentiated hematopoietic cells

description: The familial acute myeloid leukemia related factor gene (FAMLF) was previously identified from a familial AML subtractive cDNA library and shown to undergo alternative splicing. This study used real-time quantitative PCR to investigate the expression of the FAMLF alternative-splicing transcript consensus sequence (FAMLF-CS) in peripheral blood mononuclear cells (PBMCs) from 119 patients with de novo acute leukemia (AL) and 104 healthy controls, as well as in CD34+ cells from 12 AL patients and 10 healthy donors. A 429-bp fragment from a novel splicing variant of FAMLF was obtained, and a 363-bp consensus sequence was targeted to quantify total FAMLF expression. Kruskal-Wallis, Nemenyi, Spearman's correlation, and Mann-Whitney U-tests were used to analyze the data. FAMLF-CS expression in PBMCs from AL patients and CD34+ cells from AL patients and controls was significantly higher than in control PBMCs (P&lt;0.0001). Moreover, FAMLF-CS expression in PBMCs from the AML group was positively correlated with red blood cell count (rs =0.317, P=0.006), hemoglobin levels (rs =0.210, P=0.049), and percentage of peripheral blood blasts (rs =0.256, P=0.027), but inversely correlated with hemoglobin levels in the control group (rs =–0.391, P&lt;0.0001). AML patients with high CD34+ expression showed significantly higher FAMLF-CS expression than those with low CD34+ expression (P=0.041). Our results showed that FAMLF is highly expressed in both normal and malignant immature hematopoietic cells, but that expression is lower in normal mature PBMCs.
DOI: 10.6084/m9.figshare.7898603
title: Ghrelin plasma levels, gastric ghrelin cell density and bone mineral density in women with rheumatoid arthritis

description: Generalized bone loss can be considered an extra-articular manifestation of rheumatoid arthritis (RA) that may lead to the occurrence of fractures, resulting in decreased quality of life and increased healthcare costs. The peptide ghrelin has demonstrated to positively affect osteoblasts in vitro and has anti-inflammatory actions, but the studies that correlate ghrelin plasma levels and RA have contradictory results. We aimed to evaluate the correlation between total ghrelin plasma levels, density of ghrelin-immunoreactive cells in the gastric mucosa, and bone mineral density (BMD) in twenty adult women with established RA with 6 months or more of symptoms (mean age of 52.70±11.40 years). Patients with RA presented higher ghrelin-immunoreactive cells density in gastric mucosa (P=0.008) compared with healthy females. There was a positive relationship between femoral neck BMD and gastric ghrelin cell density (P=0.007). However, these same patients presented a negative correlation between plasma ghrelin levels and total femoral BMD (P=0.03). The present results indicate that ghrelin may be involved in bone metabolism of patients with RA. However, the higher density of ghrelin-producing cells in the gastric mucosa of these patients does not seem to induce a corresponding elevation in the plasma levels of this peptide.
DOI: 10.6084/m9.figshare.7898609.v1
title: Defining characteristics and related factors of the nursing diagnosis for ineffective breathing pattern

description: ABSTRACT Objective: To identify in the literature the defining characteristics and related factors of the nursing diagnosis "ineffective breathing pattern". Method: Integrative review with the steps: problem identification, literature search, evaluation and analysis of data and presentation of results. Results: Twenty articles and two dissertations were included. In children, the most prevalent related factor was bronchial secretion, followed by hyperventilation. The main defining characteristics were dyspnea, tachypnea, cough, use of accessory muscles to breathe, orthopnea and adventitious breath sounds. Bronchial secretion, cough and adventitious breath sounds are not included in the NANDA-International (NANDA-I). For adults and older adults, the related factors were fatigue, pain and obesity and the defining characteristics were dyspnea, orthopnea and tachypnea. Conclusion: This diagnosis manifests differently according to the patients’ age group. It was observed that some defining characteristics and related factors are not included in the NANDA-I. Their inclusion can improve this nursing diagnosis.
DOI: 10.6084/m9.figshare.7898612.v1
title: Biological significance of miR-126 expression in atrial fibrillation and heart failure

description: We investigated the biological significance of microRNA-126 (miR-126) expression in patients with atrial fibrillation (AF) and/or heart failure (HF) to examine the possible mechanism of miR-126-dependent AF and development of HF. A total of 103 patients were divided into three groups: AF group (18 men and 17 women, mean age: 65.62±12.72 years), HF group (17 men and 15 women, mean age: 63.95±19.71 years), and HF-AF group (20 men and 16 women, mean age: 66.56±14.37 years). Quantitative real-time PCR was used to measure relative miR-126 expression as calculated by the 2−ΔΔCt method. miR-126 was frequently downregulated in the 3 patient groups compared with controls. This reduction was significantly lower in permanent and persistent AF patients than in those with paroxysmal AF (P&lt;0.05, t-test). Moreover, miR-126 expression was markedly lower in the HF-AF group compared with the AF and HF groups. The 3 patient groups had higher N-terminal prohormone brain natriuretic peptide (NT-proBNP) levels, lower left ventricular ejection fraction (LVEF), larger left atrial diameter, and higher cardiothoracic ratio compared with controls. There were significant differences in NT-proBNP levels and LVEF among the AF, HF, and HF-AF groups. Pearson correlation analysis showed that relative miR-126 expression was positively associated with LVEF, logarithm of NT-proBNP, left atrial diameter, cardiothoracic ratio, and age in HF-AF patients. Multiple linear regression analysis showed that miR-126 expression was positively correlated with LVEF, but negatively correlated with the logarithm of NT-pro BNP and the cardiothoracic ratio (all P&lt;0.05). Serum miR-126 levels could serve as a potential candidate biomarker for evaluating the severity of AF and HF. However, to confirm these results, future studies with a larger and diverse patient population are necessary.
DOI: 10.6084/m9.figshare.7898597
title: Endovascular Repair of a Penetrating Axillary Artery Injury

description: Abstract We report a 16-year-old boy who sustained a gunshot injury on his upper left side of the chest that resulted in an injury to the left axillary artery and was treated with endovascular repair. An endovascular repair has been increasingly accepted for the management of hemorrhage in critically ill trauma patients; using covered endovascular stents provides an alternative modality for both controlling hemorrhage and preserving flow.
DOI: 10.6084/m9.figshare.7898600
title: Biometric characteristics and canopy reflectance association for early-stage sugarcane biomass prediction

description: ABSTRACT: Knowing the spatial variability of sugarcane biomass in the early stages of development may help growers in their management decision-making. Proximal canopy sensing is a promising technology that can identify this variability but is limited to quantifying plant-specific parameters. In this study, we evaluated whether biometric variables integrated with canopy reflectance data can assist in the generation of models for early-stage sugarcane biomass prediction. To substantiate this assertion, four sugarcane-producing fields were measured with an active crop canopy sensor and 30 sampling plots were selected for manually quantifying chlorophyll content, plant height, stalk number and aboveground biomass. We determined that Random Forest and Multiple Linear Regression models are similarly able to predict biomass, and that associating biometric variables such as number of stalks and plant height with reflectance data can assist model performance, depending on the attributes selected. This indicates that, when estimating biomass in the early stages, sugarcane growers can carry out site-specific management in order to increase yield and reduce the use of inputs.
DOI: 10.6084/m9.figshare.7898606.v1
title: What matters in free listing? A probabilistic interpretation of the salience index

description: ABSTRACT Free listing is a data collection technique used in different subject areas to characterize a given cultural domain. Analysis of a set of lists from a human population allows inferences to be made about the cultural salience of the items in that domain. However, the challenge that the salience index presents is establishing a threshold value for determining whether an item can be considered salient or not. The present analysis reveals how to determine which items of a list have non-randomly determined citation frequency and order. Monte Carlo techniques were used to create a hypothetical null scenario. The present analysis not only objectively identifies which items stand out in relation to the others, it also reveals which items can be considered idiosyncratic and how order and frequency independently influence the salience index. The present analysis represents a useful tool for analyzing data collected through free listing. It also can contribute to understanding processes related to the cultural relevance of items and to the test future hypotheses in different areas of knowledge.
DOI: 10.6084/m9.figshare.7898594
title: Predictors of surgical complications of nephrectomy for urolithiasis

description: ABSTRACT Objectives: Nephrectomy due to stone disease may be a challenging procedure owing to the presence of significant inflammation and infection, involving high complication rate. The objective of our study was to identify predictors for complications of nephrectomy for urolithiasis. Patients and Methods: A retrospective review of 149 consecutive patients &gt; 18y submitted to simple nephrectomy for urolithiasis from January 2006 to July 2012 was performed. Clinical data, computed tomography findings and pathology report were analyzed. Postoperative complications were categorized based on Clavien - Dindo classification. Logistic multivariate regression models assessed the predictors for surgical complications of nephrectomy for urolithiasis. Results: Eighty-three (55.7%) patients were submitted to laparoscopic nephrectomy and 66 (44.2%) to open procedure. Conversion to open surgery was necessary in 19.2% (16 / 83). On univariable analysis, higher preoperative chronic kidney stage (p = 0.02), Charlson comorbidity index ≥ 2 (p = 0.04), higher ASA score (p = 0.001), urgency due to sepsis (p = 0.01), kidney size ≥ 12 cm (p = 0.006), renal and perirenal abscess (p = 0.004 and 0.002 respectively) and visceral adhesion (p = 0.04) were associated with Clavien - Dindo score &gt; 1. On multivariate analysis, higher ASA score (p = 0.01), urgency due to sepsis (p = 0.03), kidney size ≥ 12 cm (p = 0.04) and preoperative abscess (p = 0.04) remained significantly associated with complications. End - stage renal disease with dialysis was needed post - operatively in 3.4% (5 / 144) of patients. Conclusions: We identified that higher ASA score, urgency due to sepsis, kidney size ≥ 12 cm and preoperative abscess were associated with Clavien - Dindo score &gt; 1.
DOI: 10.6084/m9.figshare.7898597.v1
title: Endovascular Repair of a Penetrating Axillary Artery Injury

description: Abstract We report a 16-year-old boy who sustained a gunshot injury on his upper left side of the chest that resulted in an injury to the left axillary artery and was treated with endovascular repair. An endovascular repair has been increasingly accepted for the management of hemorrhage in critically ill trauma patients; using covered endovascular stents provides an alternative modality for both controlling hemorrhage and preserving flow.
DOI: 10.6084/m9.figshare.7898600.v1
title: Biometric characteristics and canopy reflectance association for early-stage sugarcane biomass prediction

description: ABSTRACT: Knowing the spatial variability of sugarcane biomass in the early stages of development may help growers in their management decision-making. Proximal canopy sensing is a promising technology that can identify this variability but is limited to quantifying plant-specific parameters. In this study, we evaluated whether biometric variables integrated with canopy reflectance data can assist in the generation of models for early-stage sugarcane biomass prediction. To substantiate this assertion, four sugarcane-producing fields were measured with an active crop canopy sensor and 30 sampling plots were selected for manually quantifying chlorophyll content, plant height, stalk number and aboveground biomass. We determined that Random Forest and Multiple Linear Regression models are similarly able to predict biomass, and that associating biometric variables such as number of stalks and plant height with reflectance data can assist model performance, depending on the attributes selected. This indicates that, when estimating biomass in the early stages, sugarcane growers can carry out site-specific management in order to increase yield and reduce the use of inputs.
DOI: 10.6084/m9.figshare.7898603.v1
title: Ghrelin plasma levels, gastric ghrelin cell density and bone mineral density in women with rheumatoid arthritis

description: Generalized bone loss can be considered an extra-articular manifestation of rheumatoid arthritis (RA) that may lead to the occurrence of fractures, resulting in decreased quality of life and increased healthcare costs. The peptide ghrelin has demonstrated to positively affect osteoblasts in vitro and has anti-inflammatory actions, but the studies that correlate ghrelin plasma levels and RA have contradictory results. We aimed to evaluate the correlation between total ghrelin plasma levels, density of ghrelin-immunoreactive cells in the gastric mucosa, and bone mineral density (BMD) in twenty adult women with established RA with 6 months or more of symptoms (mean age of 52.70±11.40 years). Patients with RA presented higher ghrelin-immunoreactive cells density in gastric mucosa (P=0.008) compared with healthy females. There was a positive relationship between femoral neck BMD and gastric ghrelin cell density (P=0.007). However, these same patients presented a negative correlation between plasma ghrelin levels and total femoral BMD (P=0.03). The present results indicate that ghrelin may be involved in bone metabolism of patients with RA. However, the higher density of ghrelin-producing cells in the gastric mucosa of these patients does not seem to induce a corresponding elevation in the plasma levels of this peptide.
DOI: 10.6084/m9.figshare.7898579
title: Brain death-induced cytokine release is not associated with primary graft dysfunction: a cohort study

description: ABSTRACT Objective: To examine the association between donor plasma cytokine levels and the development of primary graft dysfunction of organs transplanted from deceased donors. Methods: Seventeen deceased donors and the respective 47 transplant recipients were prospectively included in the study. Recipients were divided into two groups: group 1, patients who developed primary graft dysfunction; and group 2, patients who did not develop primary graft dysfunction. Donor plasma levels of TNF, IL-6, IL-1β, and IFN-γ assessed by ELISA were compared between groups. Results: Sixty-nine organs were retrieved, and 48 transplants were performed. Donor plasma cytokine levels did not differ between groups (in pg/mL): TNF, group 1: 10.8 (4.3 - 30.8) versus group 2: 8.7 (4.1 - 33.1), p = 0.63; IL-6, group 1: 1617.8 (106.7 - 5361.7) versus group 2: 922.9 (161.7 - 5361.7), p = 0.56; IL-1β, group 1: 0.1 (0.1 - 126.1) versus group 2: 0.1 (0.1 - 243.6), p = 0.60; and IFN-γ, group 1: 0.03 (0.02 - 0.2) versus group 2: 0.03 (0.02 - 0.1), p = 0.93). Similar findings were obtained when kidney transplants were analyzed separately. Conclusion: In this sample of transplant recipients, deceased donor plasma cytokines TNF, IL-6, IL-1β, and IFN-γ were not associated with the development of primary graft dysfunction.