cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12295523.v1
title: Fig.1: AFM Curves 4kPa

description: Shocon-10 Cantilever was used on a JPB instrument to acquire force curves and push-through events on POPC oregon green (0.001%) bilayers<br>
DOI: 10.6084/m9.figshare.12295463
title: Chinese Mystery Snail Project Master Database

description: This is the master database created for the Chinese Mystery Snail Project. This database was generated from multiple datasets of freshwater ecosystem parameters. The data is colour-code which can be matched to the data source found in the "Metadata" tab. The data tabs are separated by provincial jurisdictions. This database does not reflect the entire range of ecological parameters available through the various data sources because I only included parameters which are biologically important for the species being modelled for (the Chinese mystery snail, <i>Cipangopaludina chinensis</i>). <br>Disclaimer: This dataset was complied with a specific goal in mind and may not be suitable to use for other projects. Please contact the researchers involved if you have any questions about the database's usability,
DOI: 10.6084/m9.figshare.12295466
title: Factors associated with health facility delivery in Kitui County; A cross sectional study

description: Data of women of reproductive age interviewed during a cross section study carried out in Kitui county-Kenya
DOI: 10.6084/m9.figshare.12295499.v2
title: Data from: Phenotypic/genotypic sex mismatches and temperature-dependent sex determination in a wild population of an Old World atherinid, the cobaltcap silverside <i>Hypoatherina tsurugae</i>

description: This archive contains information on samples of wild and laboratory-reared cobaltcap silverside, and water temperature data recorded our study area by Miyoshi et al.<br>
DOI: 10.6084/m9.figshare.12295499.v1
title: Data from: Phenotypic/genotypic sex mismatches and temperature-dependent sex determination in a wild population of an Old World atherinid, the cobaltcap silverside <i>Hypoatherina tsurugae</i>

description: This archive contains sample information of wild and laboratory-reared cobaltcap silverside, and water temperature data recorded our study area.<br>
DOI: 10.5281/zenodo.3999597
title: Test set - 4023 PubMed abstracts (for manuscript: Extracting knowledge networks from plant scientific literature: Potato tuber flesh color as an exemplary trait )

description: A .zip archive containing the set of abstracts used in the test set (4023 abstracts from PubMed) in .txt format. This archive contains supplementary files for the manuscript Extracting knowledge networks from plant scientific literature: Potato tuber flesh color as an exemplary trait.
DOI: 10.5281/zenodo.3999596
title: Test set - 4023 PubMed abstracts (for manuscript: Extracting knowledge networks from plant scientific literature: Potato tuber flesh color as an exemplary trait )

description: A .zip archive containing the set of abstracts used in the test set (4023 abstracts from PubMed) in .txt format. This archive contains supplementary files for the manuscript Extracting knowledge networks from plant scientific literature: Potato tuber flesh color as an exemplary trait.
DOI: 10.6084/m9.figshare.12860903.v1
title: Orbit&Clock

description: precise orbit and clock for the gps satellites
DOI: 10.6084/m9.figshare.12860903
title: Orbit&Clock

description: precise orbit and clock for the gps satellites
DOI: 10.6084/m9.figshare.12294743
title: Chinese mystery snail random forest model R code and databases

description: These datasets and computer code were used to generate random forest models for predicting Chinese mystery snail, <i>Cipangopaludina chinensis, </i>a non-native, potentially-invasive species, distribution in the Maritimes. The models were trained using presence and pseudo-absence data from Ontario, Alberta, and British Columbia; and validated using presence and absence data from all the aforementioned provinces plus Nova Scotia.
DOI: 10.6084/m9.figshare.12294743.v1
title: Chinese mystery snail random forest model R code and databases

description: These datasets and computer code were used to generate random forest models for predicting Chinese mystery snail, <i>Cipangopaludina chinensis, </i>a non-native, potentially-invasive species, distribution in the Maritimes. The models were trained using presence and pseudo-absence data from Ontario, Alberta, and British Columbia; and validated using presence and absence data from all the aforementioned provinces plus Nova Scotia.
DOI: 10.6084/m9.figshare.12860906
title: Usagi2013

description: Usagi 2013 trajectory
DOI: 10.6084/m9.figshare.12860906.v1
title: Usagi2013

description: Usagi 2013 trajectory
DOI: 10.5517/ccdc.csd.cc1j2y6r
title: CCDC 1403004: Experimental Crystal Structure Determination

description: Related Article: Wei-Feng Dai, Yan-Xia Zhu, Fu-Ying Qin, Jun-Lei Chang, Yue Zeng, Ji-Gang Wang, Yuan-Yuan Zhang, Yong-Xian Cheng|2020|Bioorg.Chem.|97|103675|doi:10.1016/j.bioorg.2020.103675
DOI: 10.5517/ccdc.csd.cc1j2y7s
title: CCDC 1403005: Experimental Crystal Structure Determination

description: Related Article: Wei-Feng Dai, Yan-Xia Zhu, Fu-Ying Qin, Jun-Lei Chang, Yue Zeng, Ji-Gang Wang, Yuan-Yuan Zhang, Yong-Xian Cheng|2020|Bioorg.Chem.|97|103675|doi:10.1016/j.bioorg.2020.103675
DOI: 10.5517/ccdc.csd.cc1jxt7h
title: CCDC 1427867: Experimental Crystal Structure Determination

description: Related Article: Wei-Feng Dai, Yan-Xia Zhu, Fu-Ying Qin, Jun-Lei Chang, Yue Zeng, Ji-Gang Wang, Yuan-Yuan Zhang, Yong-Xian Cheng|2020|Bioorg.Chem.|97|103675|doi:10.1016/j.bioorg.2020.103675
DOI: 10.5517/ccdc.csd.cc23mqk1
title: CCDC 1955373: Experimental Crystal Structure Determination

description: Related Article: Thiago Kelvin Brito Matos, Pedro Henrique Jatai Batista, Fernanda dos Reis Rocho, Daniela de Vita, Nicholas Pearce, Barrie Kellam, Carlos Alberto Montanari, Andrei Leitão|2020|Bioorg.Med.Chem.Lett.|30|127439|doi:10.1016/j.bmcl.2020.127439
DOI: 10.5517/ccdc.csd.cc24hv3m
title: CCDC 1981430: Experimental Crystal Structure Determination

description: Related Article: Kibrom Gebreheiwot Bedane, Lukas Brieger, Carsten Strohmann, Ean-Jeong Seo, Thomas Efferth, Michael Spiteller|2020|Bioorg.Chem.|102|104102|doi:10.1016/j.bioorg.2020.104102
DOI: 10.5517/ccdc.csd.cc24hv4n
title: CCDC 1981431: Experimental Crystal Structure Determination

description: Related Article: Kibrom Gebreheiwot Bedane, Lukas Brieger, Carsten Strohmann, Ean-Jeong Seo, Thomas Efferth, Michael Spiteller|2020|Bioorg.Chem.|102|104102|doi:10.1016/j.bioorg.2020.104102
DOI: 10.5517/ccdc.csd.cc24s9z7
title: CCDC 1989579: Experimental Crystal Structure Determination

description: Related Article: Haruka Fujino, Takumi Fukuda, Masanori Nagatomo, Masayuki Inoue|2020|J.Am.Chem.Soc.|142|13227|doi:10.1021/jacs.0c06354
DOI: 10.6084/m9.figshare.12860912
title: Indices of Space Physics

description: indices of Dst, Kp, F10.7 inSeptember and October, 2013
DOI: 10.6084/m9.figshare.12860921
title: scintillation data

description: Scintillation data from 14 September 2013 to 2 October 2013
DOI: 10.6084/m9.figshare.12293741
title: Body mass and condition of a fynbos bird community: investigating impacts of time, weather and raptor abundance from long-term citizen- science datasets

description: Variation in body size, especially mass, is a function of local environmental conditions for any given species. Recent recorded decreases in body size of endotherms have been attributed to climate change in some cases. This prediction is based on the trend of smaller body size of endotherms in warmer climates (Bergmann’s rule) and it implies genetic responses rather than phenotypic flexibility. Alternatively, selection for smaller body size or lower mass could be explained by the starvation-predation hypothesis, where lighter individuals have a higher probability of escaping pursuing predators, such as raptors. Evidence that climate warming is driving patterns of size selection in birds in recent times has been mixed. We inspected data on 40 bird species contributed by bird ringers to the South African Ringing Scheme (SAFRING) for changes in body mass and condition as a function of time (year), minimum temperature of the day of capture, maximum temperature of the previous day, and rainfall data in the south-western Cape Floristic Region (fynbos) around Cape Town, South Africa, for the period 1988–2015. The region shows a warming trend over the study period (0.035 °C yr<sup>−1</sup>). Interannual body mass and condition change were poorly explained by year or temperature. High daily minimum temperature explained loss of body condition for four species, whereas evidence from recaptured birds indicated negative effects of increasing maximum daily temperature, as well as rain. For the alternative hypothesis, because raptor abundance is stable or only weakly declining, there is little evidence to suggest these as a driver influencing mass trends. Any decrease in body mass over the study period that we observed for birds appear more likely to be plastic responses to stress associated with temperature or rainfall at this time, rather than systematic selection for smaller body size, as predicted by Bergmann’s Rule.
DOI: 10.6084/m9.figshare.12293741.v1
title: Body mass and condition of a fynbos bird community: investigating impacts of time, weather and raptor abundance from long-term citizen- science datasets

description: Variation in body size, especially mass, is a function of local environmental conditions for any given species. Recent recorded decreases in body size of endotherms have been attributed to climate change in some cases. This prediction is based on the trend of smaller body size of endotherms in warmer climates (Bergmann’s rule) and it implies genetic responses rather than phenotypic flexibility. Alternatively, selection for smaller body size or lower mass could be explained by the starvation-predation hypothesis, where lighter individuals have a higher probability of escaping pursuing predators, such as raptors. Evidence that climate warming is driving patterns of size selection in birds in recent times has been mixed. We inspected data on 40 bird species contributed by bird ringers to the South African Ringing Scheme (SAFRING) for changes in body mass and condition as a function of time (year), minimum temperature of the day of capture, maximum temperature of the previous day, and rainfall data in the south-western Cape Floristic Region (fynbos) around Cape Town, South Africa, for the period 1988–2015. The region shows a warming trend over the study period (0.035 °C yr<sup>−1</sup>). Interannual body mass and condition change were poorly explained by year or temperature. High daily minimum temperature explained loss of body condition for four species, whereas evidence from recaptured birds indicated negative effects of increasing maximum daily temperature, as well as rain. For the alternative hypothesis, because raptor abundance is stable or only weakly declining, there is little evidence to suggest these as a driver influencing mass trends. Any decrease in body mass over the study period that we observed for birds appear more likely to be plastic responses to stress associated with temperature or rainfall at this time, rather than systematic selection for smaller body size, as predicted by Bergmann’s Rule.
DOI: 10.6084/m9.figshare.12844523.v1
title: U-statistical inference for hierarchical clustering

description: Clustering methods are valuable tools for the identification of patterns in high dimensional data with applications in many scientific fields. However, quantifying uncertainty in clustering is a challenging problem, particularly when dealing with High Dimension Low Sample Size (HDLSS) data. We develop a U-statistics based clustering approach that assesses statistical significance in clustering and is specifically tailored to HDLSS scenarios. These non-parametric methods rely on very few assumptions about the data, and thus can be applied to a wide range of dataset for which the Euclidean distance captures relevant features. Our main result is the development of a hierarchical significance clustering method. In order to do so, we first introduce an extension of a relevant U-statistic and develop its asymptotic theory. Additionally, as a preliminary step, we propose a binary non-nested significance clustering method and show its optimality in terms of expected values. Our approach is tested through multiple simulations and found to have more statistical power than competing alternatives in all scenarios considered. They are further showcased in three applications ranging from genetics to image recognition problems. Code for these methods is available in R-package uclust.
DOI: 10.6084/m9.figshare.12293330
title: test01

description: <br>Data file will be uploaded soon.<br><br>
DOI: 10.6084/m9.figshare.12293330.v1
title: AllUrE-Indian 2011 dataset

description: AllUrE-India provides data on urban areas' electricity and fossil fuel use in households, industrial sectors, transportation, and commercial buildings and agricultural activities across 640 Indian districts for the year 2011, in a manner that aligns city-level data with national-level data. A novel top-down and bottom-up method was developed to estimate energy use.
DOI: 10.6084/m9.figshare.12293318
title: Supplementary Material for: A Changing Paradigm for the Treatment of Intermediate-Stage Hepatocellular Carcinoma: Asia-Pacific Primary Liver Cancer Expert Consensus Statements

description: The Asia-Pacific Primary Liver Cancer Expert (APPLE) Consensus Statement on the treatment strategy for patients with intermediate-stage hepatocellular carcinoma (HCC) was established on August 31, 2019, in Sapporo, Hokkaido during the 10th Annual APPLE Meeting. This manuscript summarizes the international consensus statements developed at APPLE 2019. Transarterial chemoembolization (TACE) is the only guideline-recommended global standard of care for intermediate-stage HCC. However, not all patients benefit from TACE because intermediate-stage HCC is a heterogeneous disease in terms of tumor burden and liver function. Ten important clinical questions regarding this stage of HCC were raised, and consensus statements were generated based on high-quality evidence. In intermediate-stage HCC, preservation of liver function is as important as achieving a high objective response (OR) because the treatment goal is to prolong overall survival. Superselective conventional TACE (cTACE) is recommended as the first choice of treatment in patients eligible for effective (curative) TACE, whereas in patients who are not eligible, systemic therapy is recommended as the first choice of treatment. TACE is not indicated as the first-line therapy in TACE-unsuitable patients. Another important statement is that TACE should not be continued in patients who develop TACE failure/refractoriness in order to preserve liver function. Targeted therapy is the recommended first-line treatment for TACE-unsuitable patients. Especially, the drug, which can have higher OR rate, is preferred. Immunotherapy, transarterial radioembolization, TACE + targeted therapy or other modalities may be considered alternative options in TACE-unsuitable patients who are not candidates for targeted therapy. Better liver function, such as albumin-bilirubin grade 1, is an important factor for maximizing the therapeutic effect of systemic therapy.
DOI: 10.6084/m9.figshare.12293345.v2
title: Late Quaternary Environment

description: Global terrestrial monthly temperature, precipitation, cloudiness, wind speed and relative humidity, 17 bioclimatic variables, net primary production, leaf area index and biomes for the last 120,000 years.<br>- Spatial resolution: 0.5°- Temporal resolution: 1,000 – 2,000 years<br>Includes R, Python and Matlab example scripts for plotting and analysing the dataset<br>
DOI: 10.6084/m9.figshare.12293318.v1
title: Supplementary Material for: A Changing Paradigm for the Treatment of Intermediate-Stage Hepatocellular Carcinoma: Asia-Pacific Primary Liver Cancer Expert Consensus Statements

description: The Asia-Pacific Primary Liver Cancer Expert (APPLE) Consensus Statement on the treatment strategy for patients with intermediate-stage hepatocellular carcinoma (HCC) was established on August 31, 2019, in Sapporo, Hokkaido during the 10th Annual APPLE Meeting. This manuscript summarizes the international consensus statements developed at APPLE 2019. Transarterial chemoembolization (TACE) is the only guideline-recommended global standard of care for intermediate-stage HCC. However, not all patients benefit from TACE because intermediate-stage HCC is a heterogeneous disease in terms of tumor burden and liver function. Ten important clinical questions regarding this stage of HCC were raised, and consensus statements were generated based on high-quality evidence. In intermediate-stage HCC, preservation of liver function is as important as achieving a high objective response (OR) because the treatment goal is to prolong overall survival. Superselective conventional TACE (cTACE) is recommended as the first choice of treatment in patients eligible for effective (curative) TACE, whereas in patients who are not eligible, systemic therapy is recommended as the first choice of treatment. TACE is not indicated as the first-line therapy in TACE-unsuitable patients. Another important statement is that TACE should not be continued in patients who develop TACE failure/refractoriness in order to preserve liver function. Targeted therapy is the recommended first-line treatment for TACE-unsuitable patients. Especially, the drug, which can have higher OR rate, is preferred. Immunotherapy, transarterial radioembolization, TACE + targeted therapy or other modalities may be considered alternative options in TACE-unsuitable patients who are not candidates for targeted therapy. Better liver function, such as albumin-bilirubin grade 1, is an important factor for maximizing the therapeutic effect of systemic therapy.
DOI: 10.6084/m9.figshare.12293309
title: New information about the third stage larva and larval habitat of <i>Microdon (Chymophila) bruchi</i> Shannon, 1927 (Diptera, Syrphidae) from Argentina

description: In this paper, we provide new biological information about <i>Microdon</i>(<i>Chymophila</i>) <i>bruchi</i> Shannon, 1927. We present new records of <i>M. bruchi</i> in nests of <i>Camponotus mus</i> Roger, 1863 built inside <i>Vitis vinifera</i> L. plants from Argentina (Mendoza Province) and records of this species for Catamarca and Entre Ríos, Argentina. DNA barcodes and data on morphology and locomotion for third-stage larvae are provided. An identification key is also given to distinguish <i>M. bruchi</i> from other Neotropical species of <i>Chymophila</i>. We designate a lectotype for <i>Microdon bruchi</i> Shannon, 1927, and we consider <i>Microdon argentinae</i> Hull, 1937 a junior synonym of <i>M. bruchi</i>. urn:lsid:zoobank.org:pub:D507A381-27BA-40D6-BC08-28F14579694F
DOI: 10.6084/m9.figshare.12293309.v1
title: New information about the third stage larva and larval habitat of <i>Microdon (Chymophila) bruchi</i> Shannon, 1927 (Diptera, Syrphidae) from Argentina

description: In this paper, we provide new biological information about <i>Microdon</i>(<i>Chymophila</i>) <i>bruchi</i> Shannon, 1927. We present new records of <i>M. bruchi</i> in nests of <i>Camponotus mus</i> Roger, 1863 built inside <i>Vitis vinifera</i> L. plants from Argentina (Mendoza Province) and records of this species for Catamarca and Entre Ríos, Argentina. DNA barcodes and data on morphology and locomotion for third-stage larvae are provided. An identification key is also given to distinguish <i>M. bruchi</i> from other Neotropical species of <i>Chymophila</i>. We designate a lectotype for <i>Microdon bruchi</i> Shannon, 1927, and we consider <i>Microdon argentinae</i> Hull, 1937 a junior synonym of <i>M. bruchi</i>. urn:lsid:zoobank.org:pub:D507A381-27BA-40D6-BC08-28F14579694F
DOI: 10.6084/m9.figshare.12293330.v2
title: AllUrE-India 2011 dataset

description: AllUrE-India provides data on urban areas' electricity and fossil fuel use in households, industrial sectors, transportation, and commercial buildings and agricultural activities across 640 Indian districts for the year 2011, in a manner that aligns city-level data with national-level data. A novel top-down and bottom-up method was developed to estimate energy use.<br>Data file will be uploaded soon.<br><br>
DOI: 10.6084/m9.figshare.12293330.v4
title: test01

description: <br>Data file will be uploaded soon.<br><br>
DOI: 10.6084/m9.figshare.12293330.v3
title: India 2011

description: <br>Data file will be uploaded soon.<br><br>
DOI: 10.6084/m9.figshare.12293198
title: MPOC dataEvaluation of Family Centered Services for children with disabilities in a not for profit organization in urban India Part 1 Quantitative findings

description: MPOC 20 and MPOC SP data
DOI: 10.6084/m9.figshare.12293198.v1
title: MPOC dataEvaluation of Family Centered Services for children with disabilities in a not for profit organization in urban India Part 1 Quantitative findings

description: MPOC 20 and MPOC SP data
DOI: 10.6084/m9.figshare.12293192
title: Supplementary Material for: A Monocentric, Retrospective Analysis of 61 Patients with Generalized Granuloma Annulare

description: <b><i>Background:</i></b> Granuloma annulare is a chronic noninfectious granulomatous skin condition with variable clinical presentations. Generalized granuloma annulare, defined as widespread disease with &gt;10 skin lesions, accounts for 15% of all cases. Numerous associated diseases have been controversially discussed, most importantly diabetes mellitus, dyslipidemia, thyroid disease, malignancy and systemic infections. <b><i>Objectives:</i></b> The objective of our study is to describe disease characteristics, treatment outcome and associated diseases in patients treated at the Department of Dermatology of the University Hospital Zurich during the last 20 years. <b><i>Methods:</i></b> The hospital database was searched for patients with generalized granuloma annulare in the last 20 years (January 1, 1998, to December 31, 2017). Overall, 61 patients, 14 males and 47 females, were included in our study. The mean age was 58 years at first consultation. The diagnosis was verified clinically and histologically. <b><i>Results:</i></b> Generalized granuloma annulare occurred at a mean age of 55 years, more commonly in females. Pruritus was absent in 51% of all patients. Metabolic diseases including diabetes mellitus, hypercholesterinemia and hypertriglyceridemia were present in 10.5, 8.2 and 4.9%, respectively. Thyroid disease was present in 9.8% and malignant disease in 23%, including colorectal cancer, lymphoproliferative disease, squamous cell carcinoma of the esophagus, basal cell carcinoma and gynecological malignancy. Therapy was initiated in 92%, while second- and third-line therapy was performed in 70 and 39%, respectively. Benefit during therapy (e.g., full and partial remission) was achieved in 39.3% during first-line, in 39.4% during second-line and in 33.8% during third-line treatment. Topical corticosteroids were the most commonly prescribed treatment, mostly leading to stable disease (46.6%). Combined full and partial remission occurred in a large proportion of patients receiving UVA1 (45%), PUVA (63.6%) and intralesional triamcinolone acetonide (100%). <b><i>Conclusions:</i></b> Generalized granuloma annulare is a mostly asymptomatic and benign disease with a strong tendency for treatment resistance. We suggest to screen all patients for dyslipidemia, thyroid disease and malignant disease. While randomized trials are needed, we suggest topical corticosteroids as the first-line treatment, intralesional triamcinolone acetonide for persistent solitary lesions and, if further treatment is needed, UVA1 or PUVA.
DOI: 10.6084/m9.figshare.12293156
title: MPOC 20 Evaluation of Family- Centered Services for children with disabilities in urban India Part 1 Quantitative findings

description: MPOC 20 and MPOC SP has been used to evaluate Family centered Services in India for the first time