cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/j6657wk3tf
title: Data Set of Manual Metal Arc Welded heterogeneous thin steel plates AISI1018 AND AISI4340

description: Advancement in technology demands the joining of heterogeneous metals of low and high-carbon steel grades. In this investigation, AISI1018 low and AIS4340 medium carbon steels were welded to form a heterogeneous thin metal joint using the Manual Metal Arc Welding (MMAW) method. Experimental variation of welding current, electrode position, and weld orientation are selected as the MMAW factors. The trials are planned using the Full Factorial Design (FFD) and the trial results are analysed using Analysis of Variance (ANOVA). A computerised tensile testing machine (TM2101N) was used to test the tensile strength of the welded specimens that were prepared in accordance with the ASTM standard. The prediction model for tensile strength was generated based on regression analysis. The ANOVA and prediction model helped in studying the effect of the MMAW factors.
DOI: 10.17632/p9rx2j7dzm
title: Replication files for "Signals and Stigmas from Banking Interventions: Lessons from the Bank Holiday of 1933"

description: Replication files for "Signals and Stigmas from Banking Interventions: Lessons from the Bank Holiday of 1933" published in the Journal of Financial Economics.
DOI: 10.17632/vscj4vc86j
title: A Fortran 90 program to solve the Hartree–Fock equations for interacting spin- 1 2 fermions confined in harmonic potentials

description: Abstract A set of weakly interacting spin- 1 2 Fermions, confined by a harmonic oscillator potential, and interacting with each other via a contact potential, is a model system which closely represents the physics of a dilute gas of two-component fermionic atoms confined in a magneto-optic trap. In the present work, our aim is to present a Fortran 90 computer program which, using a basis set expansion technique, solves the Hartree–Fock (HF) equations for spin- 1 2 Fermions confined by a three-di... Title of program: trap.x Catalogue Id: AEBB_v1_0 Nature of problem The simplest description of a spin ½ trapped system at the mean field level is given by the Hartree-Fock method. This program presents an efficient approach to solving these equations. Additionally, this program can solve for time-independent Gross-Pitaevskii and Hartree-Fock equations for bosonic atoms confined in a harmonic trap. Thus the combined program can handle mean-field equations for both the fermi and the bose particles. Versions of this program held in the CPC repository in Mendeley Data AEBB_v1_0; trap.x; 10.1016/j.cpc.2008.04.004 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.6084/m9.figshare.19726102.v3
title: GSE147520

description: 7 human primary thymic cancer tumors.
DOI: 10.6084/m9.figshare.5208595.v1
title: EnergyFluxes_JGR_2017.mat

description: This dataset is presented in the paper submitted to Journal of Geophysical Research-Atmospheres: Variability of surface heat fluxes and its driving forces at different time scales over a large shallow lake in China. This dataset includes all the measured data used in the paper. For the detailed data description, please refer to the paper.
DOI: 10.6084/m9.figshare.1288737.v1
title: Data of GWAS associated SNPs in regulatory regions

description: Data file 1: DNase I hotspot samples included in FORGE analysis. A list of DNase I hotspot samples included in FORGE analysis is shown.The table lists details of the 125 ENCODE and 299 Roadmap Epigenome samples. The fields are File: file name; Lab: data-generating lab. One of UW (University of Washington, John Stamatoyannopoulos lab), Duke:UNC:UTA (Duke University, Greg Crawford lab) or combined representing a merged dataset from both labs; Experiment type: always DNase-seq in the current implementation; Project: Either ENCODE or Roadmap; Cell: cell type; Tissue: tissue name derived as described above; Data type: always hotspots in the current implementation; Short name: a short sample used for plotting; Individual: either the code for the individual sample as described in Biosamples or NA if not available; GEO accession: the GEO accession where found, or “Not found” if it could not be deconvoluted. Data file 2: List of phenotypes analysed. The list of phenotypes analysed, with non-redundant SNP counts and Pubmed identifiers for the studies involved is shown. This table is also available in the data directory of the GitHub release,https://github.com/iandunham/Forge.
DOI: 10.6084/m9.figshare.21716807.v1
title: Data repository for our publication: "In-silico device performance prediction of co-sensitizer dye pairs for dye-sensitized solar cells"

description: Data repository for our publication: "In-silico device performance prediction of co-sensitizer dye pairs for dye-sensitized solar cells"
DOI: 10.6084/m9.figshare.27188316.v1
title: Gonadotropin therapy for induction of mini-puberty in male infants with hypogonadotropic hypogonadism - supplementary material.docx

description: This is the supplementary material for a systematic review evaluating gonadotropin therapy for induction of mini-puberty in male infants with hypogonadotropic hypogonadism.
DOI: 10.6084/m9.figshare.8148653.v1
title: Table S2 from Habitat preference modulates trans-oceanic dispersal in a terrestrial vertebrate

description: The importance of long-distance dispersal (LDD) in shaping geographical distributions has been debated since the nineteenth century. In terrestrial vertebrates, LDD events across large water bodies are considered highly improbable, but organismal traits affecting dispersal capacity are generally not taken into account. Here, we focus on a recent lizard radiation and combine a summary-coalescent species tree based on 1225 exons with a probabilistic model that links dispersal capacity to an evolving trait, to investigate whether ecological specialization has influenced the probability of trans-oceanic dispersal. <i>Cryptoblepharus</i> species that occur in coastal habitats have on average dispersed 13 to 14 times more frequently than non-coastal species and coastal specialization has, therefore, led to an extraordinarily widespread distribution that includes multiple continents and distant island archipelagoes. Furthermore, their presence across the Pacific substantially predates the age of human colonization and we can, therefore, explicitly reject the possibility that these patterns are solely shaped by human-mediated dispersal. Overall, by combining new analytical methods with a comprehensive phylogenomic dataset, we use a quantitative framework to show how coastal specialization can influence dispersal capacity and eventually shape geographical distributions at a macroevolutionary scale.
DOI: 10.17632/5t8t96fpp5
title: LDOM (ACCEPTED REVISION)

description: Supplementary Material for LDOM Meta-analysis of BP
DOI: 10.6084/m9.figshare.14597793.v1
title: Magnetism Insights from the Thomas Young Experiment Data.xlsx

description: This is data that was collected for the paper "Magnetism: Insights from the Thomas Young Experiment" where it was proven that magnetism organizes itself into a wave no matter the disturbances. It must be something discrete before it organizes itself into a wave. It must be something discrete before it organizes into a wave formation. That discrete thing was named a khumson. Renamed a khumalon not to confuse it with a town in Uzbekistan.<br><br>The khumalon is a massless, low energy, highly unstable quantum phenomenon associated with regulating energy that gives a particle a charge. Its wave has a gaussian distribution. <br><br>All experiments involved measuring millimetre by millimetre the gauss readings in front of a metal slab with different configurations of slits. The metal slabs where themselves placed behind a powerful neodymium magnet. <br><br>As no such tool existed, a small rail system had to be created that could move millimetre by millimetre or less and the gauss meter sensor was given a place to be affixed nd thus turning a screw measure magnetic field and changes millimetre by millimetre. <br>
DOI: 10.6084/m9.figshare.17299733.v2
title: CPRD_protocol_codelists.xlsx

description: p.p1 {margin: 0.0px 0.0px 0.0px 0.0px; font: 13.0px 'Helvetica Neue'} This repository contains both the CPRD Read code lists and CPRD product lists for diagnoses and treatment of type1 and type 2 diabetes, hypertension and hyper- or hypothyroidism.
DOI: 10.6084/m9.figshare.22134443.v1
title: Supplementary files: The comparison of knowledge score between lecture – based learning and the combination of problem – based learning and lecture – based learning among internal medicine students: a meta – analysis

description: Supplementary files: The comparison of knowledge score between lecture – based learning and the combination of problem – based learning and lecture – based learning among internal medicine students: a meta – analysis
DOI: 10.6084/m9.figshare.28547024.v1
title: Supplementary File 3: Tree_topology_test

description: Supplementary File 3: Tree_topology_test
DOI: 10.6084/m9.figshare.c.3598523_d5.v1
title: Additional file 7: Table S7. of Whole genome sequence analysis of the TALLYHO/Jng mouse

description: Private indel classification. Classification of private TH indels by sets of SO terms associated with the indel. (XLSX 8 kb)
DOI: 10.6084/m9.figshare.19410542.v1
title: scores body components cuttlefish - Camou project

description: each component elicited by the experimental backgrounds was scored from 0 (not expressed) to 3 (intensively expressed). Fifteen cuttlefish (A2, B2, B3, B4, C1, C2, C3, D1, D2, D5, D6, D7, D8, D9, D10) were tested on 8 backgrounds:ug : uniform greysbs : small black squaresobs : outlined black squaresbg : black gridwb : white stripessws : small white squaresws : white squareswc : white crosses
DOI: 10.6084/m9.figshare.20347197.v1
title: dataset-tfidf20.xlsx

description: TF-IDF Feature file for offensive lanaguage detetcion problem
DOI: 10.6084/m9.figshare.23687949.v1
title: Phylogeny alignment files

description: Alignment files for cox1, ef1-alpha, and a concatenated file for Myrsidae and Brueelia samples generated using the program MAFFT.
DOI: 10.6084/m9.figshare.25340761.v1
title: Supplementary Material for: Multifocal Insulinoma as the Unique Presenting Feature of MEN1 in an Adolescent

description: Introduction
Multiple Endocrine Neoplasia Type 1 (MEN1) is an autosomal dominant inherited disorder defined by the presence of two of the following endocrinopathies: primary hyperparathyroidism, anterior pituitary tumors, and duodenopancreatic neuroendocrine tumors (NETs). NETs, which can secrete hormones including insulin, gastrin, and glucagon, among others, are common in patients with MEN1 and are a major cause of morbidity and premature death. NETs are more common later in life, with very few cases described in children. Here, we describe a unique case of an adolescent with multifocal pancreatic NETs as the single presenting feature of MEN1. 

Case Presentation
A 13-year-old healthy male presented with severe weakness, altered mental status, and syncope in the setting of a venous blood glucose (BG) of 36 mg/dL. Workup showed an elevated insulin level (14 mcIU/mL) when BG was 39 mg/dL with positive response to glucagon, concerning for hyperinsulinism. Diazoxide and chlorothiazide were started but not well tolerated secondary to emesis. Three suspected NETs were identified by MRI and 68-Ga DOTATATE PET-CT imaging, including the largest, a 2.1 cm mass in the pancreatic head. A fourth mass in the pancreatic tail was identified via intraoperative ultrasound. All lesions were successfully enucleated and excised, and glucose levels normalized off diazoxide by post-op day 2. While the primary lesion stained for insulin and somatostatin by immunofluorescence (IF), consistent with his clinical presentation, the additional tumors expressed glucagon, somatostatin, pancreatic polypeptide, and chromogranin A but were negative for insulin. Genetic testing confirmed a pathogenic heterozygous mutation in MEN1 (c.969C&gt;A, p.Tyr323). He had no other signs of MEN-associated comorbidities on screening. 

Discussion/Conclusion
This case demonstrates that young patients with MEN1 can present with multifocal NETs. These NETs may have polyhormonal expression patterns despite a clinical presentation consistent with one primary hormone. Our patient had clinical symptoms and laboratory evaluation consistent with an insulinoma but was found to have four NETs, each with different IF staining patterns. Advanced pre-operative and intraoperative imaging is important to identify and treat all present NETs. Moreover, serum hormone levels pre- and post-treatment could help evaluate whether NETs are actively secreting hormones into the bloodstream or simply expressing them within the pancreas. Finally, this case highlights the importance of genetic testing for MEN1 in all young patients with insulinomas.
DOI: 10.6084/m9.figshare.26085793.v1
title: SPSS file of demographics and scores from two psychometric scales: 1) The Purpose in Life Test, and 2) The Meaning in Life Questionnaire.

description: SPSS file of data gathered from 381 respondents to a survey. The data consists of demographics and scores from two psychometric scales: 1) The Purpose in Life Test, and 2) The Meaning in Life Questionnaire.
DOI: 10.6084/m9.figshare.26988577.v1
title: Guo <i>et al.</i> 2024

description: Microbial communities adapted to local litter may accelerate ‘home’ leaf litter decomposition rates, a phenomenon known as home-field advantage (HFA). However, we do not yet fully understand HFA, as its strength is highly variable and depends on environmental conditions.
DOI: 10.6084/m9.figshare.29099921.v1
title: TMQM filtered dataset with QTAIM values

description: Low LOT - new_parse_tmQM_wB97MV_TPSS_QTAIM_impute_aligned_test.pkl and new_parse_tmQM_wB97MV_TPSS_QTAIM_impute_aligned_train.pkl<br><br>Mid LOT - tmQMg_TPSS_QTAIM_impute<br>High LOT - new_parse_tmQMg_qtaim_impute_corrected_test.pkl and new_parse_tmQMg_qtaim_impute_corrected_train.pkl
DOI: 10.6084/m9.figshare.5128810.v1
title: Supplementary Material for: Evaluation of Computed Tomography for Lymph Node Staging in Bladder Cancer Prior to Radical Cystectomy

description: <b><i>Objectives:</i></b> To retrospectively evaluate the value of CT for lymph node (LN) staging in bladder cancer. <b><i>Methods:</i></b> Two uroradiologists reviewed CT scans of 231 patients who underwent radical cystectomy and pelvic lymphadenectomy according to a predefined 12-field template. A 5-step model was used to grade the radiological likelihood of a LN to represent malignant spread based on size, configuration and structure as well as regional clustering. Statistical analyses were performed both on patient- and field-based levels. <b><i>Results:</i></b> LN metastases were found in 59 of 231 patients (25.5%). On a patient-based level, sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV) and accuracy were 52.6, 93.6, 73.2, 85.6 and 83.4%, respectively. Using the field-based approach, a total of 1,649 anatomical fields were evaluable, of which 114 fields showed malignancy (6.9%). On a field basis, sensitivity, specificity, PPV, NPV and accuracy were 30.2, 98, 51.5, 94.5 and 93.3%, respectively. Concerning local staging (pT category), the overall accuracy was 78%; overstaging occurred in 6% and understaging in 16%. <b><i>Conclusions:</i></b> In line with prior studies, the sensitivity of CT imaging for the detection of LN metastases was low, while high values for specificity were achieved. This was further underlined by analyzing standardized anatomical fields. Concerning local staging, postoperative changes after TURB-T rarely led to overstaging.
DOI: 10.17632/sdwxm9y78x
title: Warming unsynchronised tree radial growth and regional vegetation canopy growth in semi-arid areas of north-eastern China——a case of Pinus sylvestris var. mongolica in plantation

description: Research data of Warming unsynchronised tree radial growth and regional vegetation canopy growth in semi-arid areas of north-eastern China——a case of Pinus sylvestris var. mongolica in plantation
DOI: 10.23641/asha.26142661.v1
title: Assessing preterm-born children’s language ability (Coughlan et al., 2024)

description: <b>Purpose: </b>To understand how best to assess the language abilities of preterm-born children, this study: (a) compared preterm- and term-born children’s language skills using standardized testing and language sample analysis (LSA), (b) investigated how executive function skills and the language sampling context respectively affect standardized test and LSA scores, and (c) examined the pattern of associations between standardized test and LSA scores among preterm-/term-born groups.<b>Method: </b>Twenty-five term-born and 23 preterm-born 2-year-old singletons were administered the language scales of the Bayley Scales of Infant and Toddler Development–Third Edition (receptive communication, expressive communication, language composite scores). Parent–child free-play recordings were used to quantify the (para)linguistic features of the children’s speech. Executive function was measured via parent report.<b>Results: </b>The preterm-born group obtained significantly lower scores than the term-born group on all Bayley language measures (though differences were not consistently observed when using cutoff scores). Few preterm–term differences in LSA measures were found. The preterm–term differences in Bayley scores were not explained by between-group differences in executive function. Some preterm–term differences in LSA scores were moderated by the language sampling context. The preterm- and term-born groups exhibited different patterns of Bayley–LSA correlations.<b>Conclusions: </b>Preterm language difficulties were more apparent on standardized test than LSA scores. Nonetheless, the Bayley–LSA correlations indicate that poor test performance (linked with preterm birth) is associated with functional communication difficulties. The discussion outlines the complementary utility of standardized tests and LSA while acknowledging the limited utility of cutoff scores and the confounding influence of the language sampling context.<b>Supplemental Material S1.</b> Operationalization of the linguistic and paralinguistic features of child speech.<b>Supplemental Material S2.</b> AN(C)OVAs investigating the effect of birth status and the language sampling context on the linguistic and paralinguistic features of child speech.<b>Supplemental Material S3.</b> Coefficients of variation.Coughlan, S., Quigley, J., & Nixon, E. (2024). Assessing the language abilities of preterm-born children: An examination of standardized testing and language sample analysis. <i>American Journal of Speech-Language Pathology</i>, <i>33</i>(5), 2327–2343. https://doi.org/10.1044/2024_AJSLP-23-00318
DOI: 10.6084/m9.figshare.23271638.v1
title: Replication files for "Broadcasting Messages via Telegram: Pro-government Social Media Control During the 2020 Protests in Belarus and 2022 Anti-war Protests in Russia"

description: The files include the replication data (dataset, code, and output) for "Broadcasting Messages via Telegram: Pro-government Social Media Control During the 2020 Protests in Belarus and 2022 Anti-war Protests in Russia"
DOI: 10.6084/m9.figshare.23626407.v1
title: PC9 cell line scRNAseq datasets

description: In GEO NCBI repository are available single cell data on PC9 untreated lung cancer cell line done in two different labs, using both 10XGenomics and Drop-seq platforms and produced from in vitro culture or xenograph experiments.set1: GSM3972657 PC9 in vitro dropseq Chicago (2500 cells)set2: SM4494347 PC9 in vitro dropseq Chicago (12000 cells)set3: GSM3972651 PC9 in vitro 10XGenomics Chicago (12649 cells)set4: GSM6106787 PC9 in vitro 10XGenomics Berkeley (413 cells)set5: GSM4869650 PC9 xenograft dropseq Chicago (29983 cells)set6: GSM3972674 PC9 and U937 in vitro dropseq Chicago (2634 cells)set7 BE1 GSE243665 PC9 in vitro 10XGenomics Turin (4492 cells)These datasets, because of their differences, i.e. platforms, growth, labs, represent an ideal instrument to benchmark batch removal methods as well as integration methods. The seven sets are available as datasets with the same gene annotation (ensemblID:Symbol). Each set has the cellID with the extension _s(1:5) and set6 has two extensions _s6PC9 and _s6U937, set7 has extension _PC9.
DOI: 10.17632/cnn4kbgpjx
title: GRF Data for Hip-related Fractures

description: This includes the analysed data from a portion of GaitRec Data published previoulsy. The data includes three hip fractures (coxa, femur, pelvis) and one normal condition. In this data three dimensional ground reaction forces (GRF) are reported for both fractured and normal condition. This data is filtered and mass normalised. The GRF(s) are reported for both fractured and intact sides as two separate excel files. In the metadata file, all subjects information is presented. Peak magnitudes of normalised GRF(s) and data for interlimb correlations is presented as two further Excel files.
DOI: 10.17632/d9xz2k5pyk
title: Data for: Personality, plasticity and predictability in sticklebacks: bold fish are less plastic and more predictable than shy fish

description: SUPPLEMENTARY DATA FOR: Jolles, Briggs, Araya-Ajoy, & Boogert (2019) Personality, plasticity and predictability in sticklebacks: bold fish are less plastic and more predictable than shy fish. SUMMARY: In this study we tested 80 individual wild-caught three-spined sticklebacks (Gasterosteus aculeatus) repeatedly over a 10-week period in a classic boldness assay to investigate the links between the personality, plasticity and predictability. Fish were tested in random order in one of eight replicate testing boxes under controlled laboratory conditions. Using a mixed-modelling approach we demonstrate that individual variation in boldness, i.e. the tendency to trade off risks versus potential rewards, is fundamentally linked to temporal plasticity and predictability: bold fish were less plastic in their behaviour and more predictable than shy fish. Statistical simulations using a novel statistical framework (‘SQUiD’) show that our experimental dataset has sufficient statistical power to provide accurate and precise statistical parameter estimates. DATA: All raw data of the boldness trials is provided in the file boldnessdat.csv and the code for running the final mixed model of the experimental dataset before the testing break and subsequently setting up and running statistical simulations using the SQuID framework cna be found in the file squidsimulations.r. id = identity of the fish. testwk = week of testing relative to start of experimental period. session = sequence number of testing trial for that individual over the testing period. trial = sequence number of testing trial during the day. box = testing box in which the fish was tested. prop.out = the proportion of time a fish spent out of cover in the boldness assay. id.group = identity of the group a fish was housed in over the testing break between weeks 6 and 10.
DOI: 10.6084/m9.figshare.22558005.v4
title: Raw imaging data (U2OS and cardiomyocyte datasets)

description: Raw data including molecular coordinate tables, DAPI and cell membrane staining images (where available), and derived segmentation masks. <br> - u2os_merfish.tar.gz: U2OS cells - slide5_submission_rezip.zip: doxorubicin-treated cardiomyocytes and normal cardiomyocytes
DOI: 10.17632/gc9vdn74v8
title: Optimal Insemination Eligibility Period Supplemental Material

description: Our objective was to develop a discrete, monthly Markov chain model to account for reproductive performance, semen type ( conventional vs. sexed and beef), heifer survival rate, and insemination eligibility period to assess economic performance, herd dynamics, and the optimal insemination eligibilty periods for representative herd scenarios. The supplemental data published provides the outputs for the representative herd scenarios modeled.