cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.vpc25u
title: Occurrence Download

description: A dataset containing 9217 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carex rotundata Wahlenb.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9217 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076588-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.846nfq
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Herbario Nacional Colombiano (COL)",
 "Geometry POLYGON((-73.13367 5.77365,-73.13745 5.76494,-73.14002 5.75554,-73.13058 5.75042,-73.12303 5.74564,-73.11547 5.75418,-73.11032 5.7622,-73.11427 5.77177,-73.12371 5.77416,-73.13367 5.77365))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 1 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003829-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qvfpgf
title: Occurrence Download

description: A dataset containing 260 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erythemis haematogastra (Burmeister, 1839)"
 ]
}

 The dataset includes 260 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014556-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b46zn6
title: Occurrence Download

description: A dataset containing 4884 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Procyon lotor (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Country is Belgium"
 ]
}

 The dataset includes 4884 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009705-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5tq1l9
title: Occurrence Download

description: A dataset containing 521854 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "DecimalLongitude is greater than or equal to 10.5059",
 "DecimalLongitude is less than or equal to 12.0696",
 "DecimalLatitude is greater than or equal to 58.8286",
 "DecimalLatitude is less than or equal to 59.8439"
 ]
}

 The dataset includes 521854 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006383-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rm8qcc
title: Occurrence Download

description: A dataset containing 75 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Wulfenia carinthiaca Jacq.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 75 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075491-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xrf7b6
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (CHN.15_1, CHN.31_1, CHN.1_1, CHN.24_1)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Paraphlomis lancidentata Y.Z.Sun"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021040-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2tzkm0
title: Occurrence Download

description: A dataset containing 917 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Eriocnemis derbyi (Delattre & Bourcier, 1846)",
 "TaxonKey is Conothraupis speculigera (Gould, 1855)",
 "TaxonKey is Alternanthera areschougii R.E.Fr.",
 "TaxonKey is Acanthosyris annonagustata C.Ulloa & P.M.Jørg."
 ]
}

 The dataset includes 917 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006383-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f4vkw9
title: Occurrence Download

description: A dataset containing 10097 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Bombus auricomus (Robertson, 1903)"
 ]
}

 The dataset includes 10097 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075485-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gk953s
title: Occurrence Download

description: A dataset containing 3071 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is BD de la plateforme partagée pour la diffusion des données naturalistes de Haute-Normandie-Inventaires faunistiques et floristiques de la ville du Havre"
 ]
}

 The dataset includes 3071 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0231773-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ry3g9e
title: Occurrence Download

description: A dataset containing 19721 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Xanthium spinosum L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 19721 records from 417 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075481-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15233050
title: mbDiffusion: Imputing Microbiome Data using Conditional Diffusion Generative Models

description: All datasets and corresponding metadata used in mbDiffusion.
DOI: 10.5281/zenodo.15233051
title: mbDiffusion: Imputing Microbiome Data using Conditional Diffusion Generative Models

description: All datasets and corresponding metadata used in mbDiffusion.
DOI: 10.6084/m9.figshare.28787375
title: Genome annotation (repeats and protein-coding genes)

description: Genome annotation (repeats and protein-coding genes)
DOI: 10.15468/dl.qzhqq4
title: Occurrence Download

description: A dataset containing 174326 species occurrences available in GBIF matching the query:
{
 "PublishingOrg" : [
 "is 541c2668-9391-4479-b90f-fe90b365f33b"
 ]
}

 The dataset includes 174326 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060627-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c9gndj
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acalitus capparidis Flechtmann, 2000"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060623-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p5a5pq
title: Occurrence Download

description: A dataset containing 6169 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhabdophis tigrinus (Boie, 1826)"
 ]
}

 The dataset includes 6169 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077383-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dwv36k
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Durangonella coahuilae D.W.Taylor, 1966"
 ]
}

 The dataset includes 101 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0135556-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vp4p2s
title: Occurrence Download

description: A dataset containing 361 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is KiEco Freshwater Ecology: River Macroinvertebrates",
 "Geometry POLYGON((-5.11047 51.82978,-5.07294 51.8462,-5.07843 51.87183,-5.14893 51.86634,-5.11047 51.82978))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 361 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046262-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ly1ona
title: Occurrence Download

description: A dataset containing 892 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fungi",
 "DecimalLatitude is greater than 47.9639869236964",
 "DecimalLatitude is less than 49.2707661297365",
 "DecimalLongitude is greater than -114.882425070143",
 "DecimalLongitude is less than -112.839659280192"
 ]
}

 The dataset includes 892 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006207-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xze3aw
title: Occurrence Download

description: A dataset containing 161 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Populus mexicana Wesm."
 ]
}

 The dataset includes 161 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076124-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cjhvns
title: Occurrence Download

description: A dataset containing 2312 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Anthocharis cardamines (Linnaeus, 1758)",
 "Year 1970-2000"
 ]
}

 The dataset includes 2312 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046205-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5548yr
title: Occurrence Download

description: A dataset containing 173 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "Geometry POLYGON ((-69.88223 12.41111, -69.94695 12.43667, -70.05612 12.53444, -70.05945 12.53806, -70.06029 12.54417, -70.06334 12.62167, -70.06306 12.62861, -70.05890 12.63111, -70.05334 12.62972, -70.03528 12.61972, -70.03111 12.61694, -69.93224 12.52806, -69.89696 12.48083, -69.89140 12.47222, -69.88556 12.45778, -69.87390 12.42194, -69.87334 12.41583, -69.87611 12.41166, -69.88223 12.41111))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 173 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039215-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.admqyf
title: Occurrence Download

description: A dataset containing 191426 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is RUS.11_1",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 191426 records from 151 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056963-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.egdgrs
title: Occurrence Download

description: A dataset containing 3657254 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((179.0000 -64.7000, 179.0000 -56.8000, 179.0000 -44.3000, 173.0000 -44.3000, 173.0000 -47.5000, 170.0000 -47.5000, 157.0000 -47.5000, 157.0000 -45.9000, 150.0000 -45.9000, 150.0000 -47.5000, 143.0000 -47.5000, 143.0000 -45.8000, 140.0000 -45.8000, 140.0000 -44.5000, 137.0000 -44.5000, 137.0000 -43.0000, 135.0000 -43.0000, 135.0000 -41.7000, 131.0000 -41.7000, 131.0000 -40.1000, 115.0000 -40.1000, 92.0000 -40.1000, 92.0000 -41.4000, 78.0000 -41.4000, 78.0000 -42.3000, 69.0000 -42.3000, 69.0000 -43.3000, 47.0000 -43.3000, 47.0000 -41.7000, 30.0000 -41.7000, 12.0000 -41.7000, 12.0000 -40.3000, 10.0000 -40.3000, 10.0000 -38.3000, -5.0000 -38.3000, -5.0000 -38.9000, -9.0000 -38.9000, -9.0000 -40.2000, -13.0000 -40.2000, -13.0000 -41.4000, -21.0000 -41.4000, -21.0000 -42.5000, -39.0000 -42.5000, -39.0000 -40.7000, -49.0000 -40.7000, -49.0000 -48.6000, -54.0000 -48.6000, -54.0000 -55.7000, -62.7973 -55.7000, -64.0000 -55.7000, -64.0000 -57.8000, -71.0000 -57.8000, -71.0000 -58.9000, -80.0000 -58.9000, -80.0000 -40.0000, -125.0000 -40.0000, -167.0000 -40.0000, -167.0000 -42.6000, -171.0000 -42.6000, -171.0000 -44.3000, -179.0000 -44.3000, -179.0000 -56.8000, -179.0000 -64.7000, -179.0000 -85.0000, -125.0000 -85.0000, -70.0000 -85.0000, 30.0000 -85.0000, 115.0000 -85.0000, 158.0000 -85.0000, 179.0000 -85.0000, 179.0000 -64.7000))"
 ]
}

 The dataset includes 3657254 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052481-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.24414/rob-gnss-oude00bel
title: GNSS data of OUDE00BEL, Oudenaarde, Belgium

description: Permanent GNSS station dataset as daily RINEX files
DOI: 10.15468/dl.qs3mdq
title: Occurrence Download

description: A dataset containing 795 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Plebejus argus (Linnaeus, 1758)",
 "Year 1970-2000"
 ]
}

 The dataset includes 795 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046226-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wprene
title: Occurrence Download

description: A dataset containing 1984 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Spodoptera frugiperda J.E.Smith, 1797",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1984 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053079-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bs5cjh
title: Occurrence Download

description: A dataset containing 11340777 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-71.51367 12.54884,-73.57617 11.17265,-76.01367 9.51264,-77.88867 7.75163,-77.23242 4.1156,-79.01367 1.6814,-74.98242 -0.00586,-72.82617 -2.06791,-70.57617 -2.06791,-70.85742 -3.3789,-70.01367 -3.75317,-69.16992 -1.78682,-69.51832 0.35904,-67.57617 2.0562,-67.66992 5.79673,-72.26367 7.93738,-73.10742 9.60508,-71.51367 12.54884))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 11340777 records from 2147 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077369-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30084166
title: Tigridiopalma magnifica annotation results

description: Tigridiopalma magnifica is a vulnerable plant belonging to the family Melastomataceae. The species is endemic to the south of China (Guangdong province). Requiring strict conditions for growing up, the species is a national second-level protected plant of China. The genetics of the plant is mainly unexplored, therefore I decided to carry out the study to contribute in conservation genomics through the plant.
DOI: 10.6084/m9.figshare.30084166.v1
title: Tigridiopalma magnifica annotation results

description: Tigridiopalma magnifica is a vulnerable plant belonging to the family Melastomataceae. The species is endemic to the south of China (Guangdong province). Requiring strict conditions for growing up, the species is a national second-level protected plant of China. The genetics of the plant is mainly unexplored, therefore I decided to carry out the study to contribute in conservation genomics through the plant.
DOI: 10.15468/dl.hynuk7
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Plagiognathops microlepis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014195-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17132337
title: Low-coverage WGS dataset of the Tetrix japonica grasshopper complex (batch 1)

description: Low-coverage (~5×) whole-genome resequencing batch-1 dataset of the Tetrix japonica grasshopper complex, comprising 16 individuals (14 Tetrix japonica and 2 Tetrix qinlingensis) sequenced on the Illumina NovaSeq 6000 platform (2×150 bp, ~350 bp insert). Raw FASTQ files are provided as paired-end reads (R1/R2) per sample.
DOI: 10.5281/zenodo.17132338
title: Low-coverage WGS dataset of the Tetrix japonica grasshopper complex (batch 1)

description: Low-coverage (~5×) whole-genome resequencing batch-1 dataset of the Tetrix japonica grasshopper complex, comprising 16 individuals (14 Tetrix japonica and 2 Tetrix qinlingensis) sequenced on the Illumina NovaSeq 6000 platform (2×150 bp, ~350 bp insert). Raw FASTQ files are provided as paired-end reads (R1/R2) per sample.
DOI: 10.57745/8mbdgv
title: readme_en.txt

description: :unav
DOI: 10.57745/f4elge
title: Permeability_data.tab

description: :unav
DOI: 10.57745/knyvjv
title: Permeability data - GeoDict simulations

description: This database contains results of flow simulations (with GeoDict software) in fibrous media with variable solid volume fractions and fibre size distributions, under continuum and slip flow regimes.
DOI: 10.5281/zenodo.17131978
title: Assessing the Contribution of EU's ecosystem mapping (MAES) -- Projects to filling IPBES knowledge gaps

description: The data from national MAES projects (Mapping and Assessment of Ecosystems and their Services) can help address knowledge gaps identified by IPBES and the IPCC. We identified and clustered 51 consolidated knowledge gaps based on the IPBES Europe and Central Asia Assessment Report and the Europe chapter of the IPCC Climate Change 2022 Report. Subsequently, we consulted experts from 14 European countries and French Guiana to identify sources of new knowledge that could help address these knowledge gaps.

Details on methods and results are in the RESPIN project Deliverable 2.3.

This database was prepared under the Horizon Europe RESPIN project (Task 2.3). RESPIN - REinforcing Science-Policy INterfaces for integrated biodiversity and climate knowledge and policies (https://respin-project.eu/), contract number is 101135490.
DOI: 10.5281/zenodo.17150856
title: Assessing the Contribution of EU's ecosystem mapping (MAES) -- Projects to filling IPBES knowledge gaps

description: The data from national MAES projects (Mapping and Assessment of Ecosystems and their Services) can help address knowledge gaps identified by IPBES and the IPCC. We identified and clustered 51 consolidated knowledge gaps based on the IPBES Europe and Central Asia Assessment Report and the Europe chapter of the IPCC Climate Change 2022 Report. Subsequently, we consulted experts from 14 European countries and French Guiana to identify sources of new knowledge that could help address these knowledge gaps.

Details on methods and results are in the RESPIN project Deliverable 2.3.

This database was prepared under the Horizon Europe RESPIN project (Task 2.3). RESPIN - REinforcing Science-Policy INterfaces for integrated biodiversity and climate knowledge and policies (https://respin-project.eu/), contract number is 101135490.
DOI: 10.57745/v3urya
title: BioRGroup dataset: R-group expansion of ChEBI molecules referenced in the Rhea database

description: This dataset transforms the many generic molecules in the ChEBI ontology—those whose structures contain undefined R‑groups—into fully specified molecular instances. Its purpose is to let cheminformaticians, enzymologists and AI/ML developers treat R‑group–bearing ChEBI entries as ordinary molecules, so they can be indexed, searched and used to augment training sets for tasks such as reaction prediction, bio‑isosteric replacement and retro‑biosynthetic pathway design. In nature, the resource is a gzip‑compressed CSV file produced by a three‑stage RDKit‑based pipeline that: 1. Extracts every ChEBI SMILES that contains at least one R‑group from the Rhea reaction database (release 134). 2. Finds real PubChem compounds whose heavy‑atom core matches the ChEBI scaffold, allowing only the R‑group position to vary. 3. Filters matches so that the final list comprises molecules differing from the template **only** at the R‑group site, and records their PubChem CIDs for traceability. Each record therefore links a generic ChEBI structure to the enumerated set of concrete PubChem structures that realise it, along with molecular weight, heavy‑atom count and bookkeeping fields that distinguish “exact core” versus “core + extra substituent” matches. The dataset’s scope encompasses all R‑group–containing entries in Rhea/ChEBI that survive atomic filters (≥ 6 heavy atoms and atoms found in living organisms), yielding 12,709 rows and eight columns that summarise: the canonical SMILES, the list of ChEBI IDs sharing that SMILES, computed properties, matched PubChem SMILES/CIDs with and without extra substituents, and provenance metadata. By expanding more than a thousand otherwise unusable generic templates into over ten thousand explicit molecules, the dataset bridges a long‑standing gap between curated biochemical ontologies and large‑scale public compound repositories, enabling systematic benchmarking, data augmentation and method development wherever R‑groups once forced researchers to discard valuable reaction data.