cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.dhwqee
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((100.49 1.530182, 100.419712 1.524614, 100.351156 1.508047, 100.286021 1.48089, 100.22591 1.443811, 100.172305 1.397723, 100.126526 1.343763, 100.089699 1.283259, 100.06273 1.217701, 100.046284 1.148704, 100.040763 1.077967, 100.046304 1.007231, 100.062769 0.938239, 100.089752 0.872688, 100.126589 0.8121930000000001, 100.172372 0.758243, 100.225973 0.712166, 100.286074 0.675095, 100.351195 0.647945, 100.419733 0.631383, 100.49 0.625816, 100.560267 0.631383, 100.628805 0.647945, 100.693926 0.675095, 100.754027 0.712166, 100.807628 0.758243, 100.853411 0.8121930000000001, 100.890248 0.872688, 100.917231 0.938239, 100.933696 1.007231, 100.939237 1.077967, 100.933716 1.148704, 100.91727 1.217701, 100.890301 1.283259, 100.853474 1.343763, 100.807695 1.397723, 100.75409 1.443811, 100.693979 1.48089, 100.628844 1.508047, 100.560288 1.524614, 100.49 1.530182))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002296-260120142942310/datasets/export for details.
DOI: 10.6084/m9.figshare.28983795
title: Mechanical insights into fat pads: a comparative study of infrapatellar and suprapatellar fat pads in osteoarthritis

description: Osteoarthritis (OA) is the most common musculoskeletal disorder, primarily affecting knee joints and causing pain and disability. The infrapatellar (IFP) and the suprapatellar (SFP) fat pad are knee adipose tissues that play essential mechanical roles during articular activity but are also sources of adipokines and cytokines, contributing to OA progression. For this reason, this work aims to provide new insights into IFP and SFP implications in knee OA. IFP and SFP tissue mechanical properties were studied through compression, indentation and shear mechanical tests performed on samples collected from patients who underwent total knee arthroplasty surgery due to end-stage OA. The energy loss, peak stress, and initial and final elastic moduli were calculated from the unconfined compression tests. The time-dependent response, evaluated in terms of equilibrium relative stiffness, was computed from stress-relaxation loading conditions. Considering shear tests, they provided strain-energy dissipation density, peak shear stress, and the shear moduli. Experimental results showed the typical adipose tissue mechanics features: non-linear stiffening with strain and time-dependent response. Experimental results showed that OA IFP is stiffer than OA SFP, indeed IFP final compression elastic modulus was greater than the SFP (84.43 kPa vs 35.54 kPa respectively) (<i>p</i> = 0.042). Regarding the viscoelastic properties they were comparable: the equilibrium relative stiffness was reported as 0.13 for IFP and 0.11 for SFP (<i>p</i> = 0.026). These outcomes provide new insights into the OA influence on knee mechanics and lay the basis for developing computational tools to improve knee prosthesis design.
DOI: 10.6084/m9.figshare.28983795.v1
title: Mechanical insights into fat pads: a comparative study of infrapatellar and suprapatellar fat pads in osteoarthritis

description: Osteoarthritis (OA) is the most common musculoskeletal disorder, primarily affecting knee joints and causing pain and disability. The infrapatellar (IFP) and the suprapatellar (SFP) fat pad are knee adipose tissues that play essential mechanical roles during articular activity but are also sources of adipokines and cytokines, contributing to OA progression. For this reason, this work aims to provide new insights into IFP and SFP implications in knee OA. IFP and SFP tissue mechanical properties were studied through compression, indentation and shear mechanical tests performed on samples collected from patients who underwent total knee arthroplasty surgery due to end-stage OA. The energy loss, peak stress, and initial and final elastic moduli were calculated from the unconfined compression tests. The time-dependent response, evaluated in terms of equilibrium relative stiffness, was computed from stress-relaxation loading conditions. Considering shear tests, they provided strain-energy dissipation density, peak shear stress, and the shear moduli. Experimental results showed the typical adipose tissue mechanics features: non-linear stiffening with strain and time-dependent response. Experimental results showed that OA IFP is stiffer than OA SFP, indeed IFP final compression elastic modulus was greater than the SFP (84.43 kPa vs 35.54 kPa respectively) (<i>p</i> = 0.042). Regarding the viscoelastic properties they were comparable: the equilibrium relative stiffness was reported as 0.13 for IFP and 0.11 for SFP (<i>p</i> = 0.026). These outcomes provide new insights into the OA influence on knee mechanics and lay the basis for developing computational tools to improve knee prosthesis design.
DOI: 10.15468/dl.4ut4ya
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is RUS.45_1",
 "Geometry POLYGON((27.75886 63.91038,41.14233 63.68867,43.58119 69.5137,27.17434 71.91225,27.75886 63.91038))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lupinus polyphyllus"
 ]
}

 The dataset includes 32 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002297-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27980554
title: Artificial intelligence for optimizing otologic surgical video: effects of video inpainting and stabilization on microscopic view

description: Optimizing the educational experience of trainees in the operating room is important; however, ear anatomy and otologic surgery are challenging for trainees to grasp. Viewing otologic surgeries often involves limitations related to video quality, such as visual disturbances and instability. We aimed to (1) improve the quality of surgical videos (tympanomastoidectomy [TM]) by using artificial intelligence (AI) techniques and (2) evaluate the effectiveness of processed videos through a questionnaire-based assessment from trainees. We conducted prospective study using video inpainting and stabilization techniques processed by AI. In each study set, we enrolled 21 trainees and asked them to watch processed videos and complete a questionnaire. Surgical videos with the video inpainting technique using the implicit neural representation (INR) model were found to be the most helpful for medical students (0.79 ± 0.58) in identifying bleeding focus. Videos with the stabilization technique <i>via</i> point feature matching were more helpful for low-grade residents (0.91 ± 0.12) and medical students (0.78 ± 0.35) in enhancing overall visibility and understanding surgical procedures. Surgical videos using video inpainting and stabilization techniques with AI were beneficial for educating trainees, especially participants with less anatomical knowledge and surgical experience.
DOI: 10.6084/m9.figshare.27980554.v1
title: Artificial intelligence for optimizing otologic surgical video: effects of video inpainting and stabilization on microscopic view

description: Optimizing the educational experience of trainees in the operating room is important; however, ear anatomy and otologic surgery are challenging for trainees to grasp. Viewing otologic surgeries often involves limitations related to video quality, such as visual disturbances and instability. We aimed to (1) improve the quality of surgical videos (tympanomastoidectomy [TM]) by using artificial intelligence (AI) techniques and (2) evaluate the effectiveness of processed videos through a questionnaire-based assessment from trainees. We conducted prospective study using video inpainting and stabilization techniques processed by AI. In each study set, we enrolled 21 trainees and asked them to watch processed videos and complete a questionnaire. Surgical videos with the video inpainting technique using the implicit neural representation (INR) model were found to be the most helpful for medical students (0.79 ± 0.58) in identifying bleeding focus. Videos with the stabilization technique <i>via</i> point feature matching were more helpful for low-grade residents (0.91 ± 0.12) and medical students (0.78 ± 0.35) in enhancing overall visibility and understanding surgical procedures. Surgical videos using video inpainting and stabilization techniques with AI were beneficial for educating trainees, especially participants with less anatomical knowledge and surgical experience.
DOI: 10.6084/m9.figshare.28114094
title: Collaborative machine learning-guided overall survival prediction of oral squamous cell carcinoma

description: There is a lack of prognosticators of overall survival (OS) for Oral Squamous Cell Carcinoma (OSCC). We examined collaborative machine learning (cML) in estimating the OS of OSCC patients. The prognostic significance of the clinicopathological parameters was examined. Altogether, 9439 OSCC patients were extracted from the Surveillance, Epidemiology, and End Results database (US). Five ML models – voting ensemble, stacked ensemble, extreme gradient boosting, light boosting, and logistic regression were used to predict OS. Three of these ML algorithms were combined to form a cluster of cML models. The performance of the cML was compared with the best performing individual ML algorithm following model training. The performance accuracy of the voting ensemble, stacked ensemble, extreme gradient boosting, light boosting, and logistic regression models was 70.2%, 69.9%, 69.1%, 69.4%, and 69.5% respectively, following model training. When the voting ensemble model was compared with cML using temporal validation, the cML showed a comparable performance accuracy. The most significant prognostic factors were age of the patient at diagnosis, T stage, tumor grade, marital status, gender, primary site, surgery, N stage, radiotherapy, ethnicity, chemotherapy, and M stage. cML appears to give reliability to the final prediction and thereby may mark a paradigm shift from model individualism to a more cooperative paradigm. This approach may aid in determining an enhanced individualized treatment for OSCC patients.
DOI: 10.6084/m9.figshare.28114094.v1
title: Collaborative machine learning-guided overall survival prediction of oral squamous cell carcinoma

description: There is a lack of prognosticators of overall survival (OS) for Oral Squamous Cell Carcinoma (OSCC). We examined collaborative machine learning (cML) in estimating the OS of OSCC patients. The prognostic significance of the clinicopathological parameters was examined. Altogether, 9439 OSCC patients were extracted from the Surveillance, Epidemiology, and End Results database (US). Five ML models – voting ensemble, stacked ensemble, extreme gradient boosting, light boosting, and logistic regression were used to predict OS. Three of these ML algorithms were combined to form a cluster of cML models. The performance of the cML was compared with the best performing individual ML algorithm following model training. The performance accuracy of the voting ensemble, stacked ensemble, extreme gradient boosting, light boosting, and logistic regression models was 70.2%, 69.9%, 69.1%, 69.4%, and 69.5% respectively, following model training. When the voting ensemble model was compared with cML using temporal validation, the cML showed a comparable performance accuracy. The most significant prognostic factors were age of the patient at diagnosis, T stage, tumor grade, marital status, gender, primary site, surgery, N stage, radiotherapy, ethnicity, chemotherapy, and M stage. cML appears to give reliability to the final prediction and thereby may mark a paradigm shift from model individualism to a more cooperative paradigm. This approach may aid in determining an enhanced individualized treatment for OSCC patients.
DOI: 10.6084/m9.figshare.30488253
title: Implementation of blood-based colorectal cancer screening: real-world adherence and outcomes

description: The overall CRC screening adherence rate remains suboptimal, with only 58% of screen-eligible individuals in the United States up to date with screening. This analysis reports on real-world adherence, test outcomes, and turnaround times for the initial large-scale clinical implementation of a blood-based CRC screening test. Providers ordered the commercially-available, blood-based Shield laboratory developed test (Guardant Health) in their clinics, based on an intended use population of individuals at average risk for CRC, aged 45 years or older. Retrospective review of laboratory orders and test turnaround times for the first 20,000 age-eligible patients was conducted; adherence rate was defined as the number of unique blood samples received out of the number of unique clinical test orders. For the first 20,000 age-eligible patients with a test order, 61% were female individuals; median age was 59 years (range = 45–99). From 20,000 patients, 18,901 provided a blood sample, resulting in 94.5% adherence. Test positivity rate was 9.2%. Median times from placement of an order to blood sample receipt in the testing laboratory and from blood sample receipt in the testing laboratory to a results report were 1 day (range = 0–182) and 15 days (range = 0–83), respectively. Real-world adherence to a blood-based CRC screening test was 95% for the first 20,000 patients, with short median turnaround times for test completion by the patient and results return. These results support the ability of blood-based options to improve adherence.
DOI: 10.6084/m9.figshare.30488253.v1
title: Implementation of blood-based colorectal cancer screening: real-world adherence and outcomes

description: The overall CRC screening adherence rate remains suboptimal, with only 58% of screen-eligible individuals in the United States up to date with screening. This analysis reports on real-world adherence, test outcomes, and turnaround times for the initial large-scale clinical implementation of a blood-based CRC screening test. Providers ordered the commercially-available, blood-based Shield laboratory developed test (Guardant Health) in their clinics, based on an intended use population of individuals at average risk for CRC, aged 45 years or older. Retrospective review of laboratory orders and test turnaround times for the first 20,000 age-eligible patients was conducted; adherence rate was defined as the number of unique blood samples received out of the number of unique clinical test orders. For the first 20,000 age-eligible patients with a test order, 61% were female individuals; median age was 59 years (range = 45–99). From 20,000 patients, 18,901 provided a blood sample, resulting in 94.5% adherence. Test positivity rate was 9.2%. Median times from placement of an order to blood sample receipt in the testing laboratory and from blood sample receipt in the testing laboratory to a results report were 1 day (range = 0–182) and 15 days (range = 0–83), respectively. Real-world adherence to a blood-based CRC screening test was 95% for the first 20,000 patients, with short median turnaround times for test completion by the patient and results return. These results support the ability of blood-based options to improve adherence.
DOI: 10.17172/nomad/2026.01.21-1
title: NOMAD dataset: Data set 1
DOI: 10.5281/zenodo.18301132
title: Datasets for the Demonstration of Emergent Cognitive Properties in Primite 1.03 Mini

description: This dataset accompanies the Primite 1.03 Mini Demonstration Protocol, and provides all behavioral- and activity-level data required to independently verify reported emergent cognitive properties in an Adaptron-based artificial cognitive system.

The dataset includes complete logs from six controlled experimental trials, conducted using identical external stimuli. Five trials (Experiments 1–5) exhibit emergent properties, while one trial (Experiment 6) is intentionally configured as a control condition, operating as a non-adaptive input–output system.
DOI: 10.5281/zenodo.18301131
title: Datasets for the Demonstration of Emergent Cognitive Properties in Primite 1.03 Mini

description: This dataset accompanies the Primite 1.03 Mini Demonstration Protocol, and provides all behavioral- and activity-level data required to independently verify reported emergent cognitive properties in an Adaptron-based artificial cognitive system.

The dataset includes complete logs from six controlled experimental trials, conducted using identical external stimuli. Five trials (Experiments 1–5) exhibit emergent properties, while one trial (Experiment 6) is intentionally configured as a control condition, operating as a non-adaptive input–output system.
DOI: 10.6084/m9.figshare.24182187
title: Physical rehabilitation for people with advanced dementia who fracture their hip – expert consensus process

description: Hip fracture is common in older people – with prevalence even higher for people with dementia. Research often excludes people with dementia – especially those in the more advanced stages. Therefore, the most appropriate interventions remain unknown. The main aim of this study was to gain consensus about the core considerations needed to deliver a physical intervention for people with advanced dementia who fracture their hip. Materials and Methods: An expert consensus process was undertaken, using Nominal Group Technique, to explore the key considerations when delivering rehabilitation. Data collection was undertaken in January 2023 and involved an online group discussion followed by voting and off-line rating. Qualitative content analysis and quantitative analysis of consensus scoring was undertaken. An international group of seven highly specialised physiotherapists took part. 59 statements were agreed following the process. Content analysis was used to categorise these statements according to the International Classification of Functioning, Disability and Health. Although consensus levels were high, there was disagreement in several areas. The statements provide an overarching understanding of the multidisciplinary expertise that is needed to effectively deliver rehabilitation interventions to this population. People with dementia require highly skilled and trained professionals, providing holistic and person-centred approaches to deliver rehabilitation interventions.IMPLICATIONS FOR REHABILITATIONThe expert consensus provides an overarching understanding of the multidisciplinary expertise that is needed to effectively deliver rehabilitation interventions to this population.Physiotherapy - or other interventions - cannot be used in isolation.People with dementia require highly skilled and trained professionals, providing holistic and person-centred approaches to deliver rehabilitation interventions.While our focus was on hip fracture, we suggest these statements can be used for people with advanced dementia with a variety of other conditions. The expert consensus provides an overarching understanding of the multidisciplinary expertise that is needed to effectively deliver rehabilitation interventions to this population. Physiotherapy - or other interventions - cannot be used in isolation. People with dementia require highly skilled and trained professionals, providing holistic and person-centred approaches to deliver rehabilitation interventions. While our focus was on hip fracture, we suggest these statements can be used for people with advanced dementia with a variety of other conditions.
DOI: 10.6084/m9.figshare.24182187.v1
title: Physical rehabilitation for people with advanced dementia who fracture their hip – expert consensus process

description: Hip fracture is common in older people – with prevalence even higher for people with dementia. Research often excludes people with dementia – especially those in the more advanced stages. Therefore, the most appropriate interventions remain unknown. The main aim of this study was to gain consensus about the core considerations needed to deliver a physical intervention for people with advanced dementia who fracture their hip. Materials and Methods: An expert consensus process was undertaken, using Nominal Group Technique, to explore the key considerations when delivering rehabilitation. Data collection was undertaken in January 2023 and involved an online group discussion followed by voting and off-line rating. Qualitative content analysis and quantitative analysis of consensus scoring was undertaken. An international group of seven highly specialised physiotherapists took part. 59 statements were agreed following the process. Content analysis was used to categorise these statements according to the International Classification of Functioning, Disability and Health. Although consensus levels were high, there was disagreement in several areas. The statements provide an overarching understanding of the multidisciplinary expertise that is needed to effectively deliver rehabilitation interventions to this population. People with dementia require highly skilled and trained professionals, providing holistic and person-centred approaches to deliver rehabilitation interventions.IMPLICATIONS FOR REHABILITATIONThe expert consensus provides an overarching understanding of the multidisciplinary expertise that is needed to effectively deliver rehabilitation interventions to this population.Physiotherapy - or other interventions - cannot be used in isolation.People with dementia require highly skilled and trained professionals, providing holistic and person-centred approaches to deliver rehabilitation interventions.While our focus was on hip fracture, we suggest these statements can be used for people with advanced dementia with a variety of other conditions. The expert consensus provides an overarching understanding of the multidisciplinary expertise that is needed to effectively deliver rehabilitation interventions to this population. Physiotherapy - or other interventions - cannot be used in isolation. People with dementia require highly skilled and trained professionals, providing holistic and person-centred approaches to deliver rehabilitation interventions. While our focus was on hip fracture, we suggest these statements can be used for people with advanced dementia with a variety of other conditions.
DOI: 10.15468/dl.a43hs6
title: Occurrence Download

description: A dataset containing 632 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cordia sulcata"
 ]
}

 The dataset includes 632 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002298-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.