cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/cdq-ycd-la7
title: Bacillariophyceae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9yw-gan-4hr
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v3d-dgj-f11
title: Heteroschismoides Ludbrook, 1960

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.cvvc4p
title: Occurrence Download

description: A dataset containing 16185 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cardaria draba"
 ]
}

 The dataset includes 16185 records from 481 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018150-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hvgdwb
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Festuca ovina tenuifolia, Festuca ovina tenuifolia, Festuca ovina capillata, Festuca ovina fissa, Festuca ovina frisia, Festuca ovina hispidula, Festuca ovina mutica, Festuca ovina mutica, Festuca ovina paludosa, Festuca ovina paludosa)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 14 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018156-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.twyyqr
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Psammolestes tertius"
 ]
}

 The dataset includes 129 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018154-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9jcryn
title: Occurrence Download

description: A dataset containing 301297 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tilia cordata"
 ]
}

 The dataset includes 301297 records from 1478 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018062-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.14344055.v1
title: Fabp-CreXApcfl468 Metadata

description: Fabp-CreXApcfl468 metadata for animals treated with VAX014 or PBS (Control) at 8 to 13 week and 14 to 19 week treatment time points
DOI: 10.6084/m9.figshare.24012408.v1
title: data for 01_dm_channel_visibility

description: this is the 1st dataset for the manuscript titled "High-rate multiplexed entanglement source based on time-bin qubits for advanced quantum networks"see the other datasets related to this paper here:https://figshare.com/projects/highrate_datasets_1/176379see the repository instructions on downloading the code and generating the plots from source: https://github.com/sansseriff/highrate_origin
DOI: 10.6084/m9.figshare.28696658.v2
title: Data and Code Repository

description: Sexual dimorphism is prevalent in nature. Specifically, the evolution of sexually dimorphic mating signals is thought to be shaped by divergent sex roles. However, with males being choosy, how male mating behavior is shaping the evolution of these sexually dimorphic mating signals remains unclear. Can sexual dimorphism in a secondary sexual character be a predictor of its role as a mating signal?Across the <i>Drosophila</i> phylogeny, cuticular hydrocarbons (CHCs) of <i>Drosophila</i> species showed varying degrees of dimorphism. In this study, using ten <i>Drosophila</i> species, we asked the question, if sexual dimorphism in CHCs can be used to predict its roles in male courtship behavior. Our results suggest that while CHC profiles are crucial in some species for courtship initiation, the degree of sexual dimorphism in CHCs is not predictive of their role as mating signals for male mate recognition.
DOI: 10.6084/m9.figshare.24631782.v2
title: Tibetan Plateau in-situ precipitation, NDVI and soil moisture data.

description: Vegetation on the Tibetan Plateau (TP) plays a crucial role in continental energy, water and carbon budgets. Throughout the rest of the 21<sup>st</sup> century, TP vegetation faces two key pressures: First, the impact of climate change-induced atmospheric changes; and second, potential shifts imposed by direct land use. In this study we characterize rainfall-driven local vegetation changes using a combination of in-situ station data and satellite observations. We then project future vegetation changes using simulated precipitation characteristics from the latest state-of-the-art Earth System Models.
DOI: 10.6084/m9.figshare.25374160.v1
title: Compression metrics Excel sheet

description: Results of compression metrics
DOI: 10.6084/m9.figshare.27313272.v1
title: Crops3D a diverse 3D crop dataset for realistic perception and segmentation toward agricultural applications

description: Crops3D is a diverse crop point cloud dataset, featuring a wealth of 3D crop point clouds sourced from real agricultural scenarios. It is designed to facilitate perception and segmentation tasks related to crop point clouds.
DOI: 10.6084/m9.figshare.23957604.v1
title: Figure 3 B-G

description: Firstly, 27 orthogonal experiments were constructed with COMSOL 6.0 software, and TC1, TC2, and TC3 were extracted by Matlab 2022b software，seen in the "TC1, TC2, and TC3 of 27 orthogonal experiments.xlsx".Then, Minitab 19 software was used to construct the main effect map and analysis of variance for parameter sensitivity analysis, seen in the "Parameter sensitivity analysis.mpx".
DOI: 10.6084/m9.figshare.26089579.v1
title: Ontología para la​ comunidad académica del Real Conservatorio Superior de Música de Madrid en el siglo XIX

description: Esta ontología de dominio establece las relaciones entre la comunidad académica del Real Conservatorio Superior de Música de Madrid (RCSMM) entre 1830 y 1892 a partir de fuentes primarias custodiadas en la Biblioteca y en el Archivo Histórico-Administrativo de dicha institución.
DOI: 10.25573/data.13122581.v1
title: San Blas, all data

description: The San Blas field station was established in 1977 and closed on June 1, 1998. The station was situated on an island adjacent to Punta de San Blas, on the Caribbean coast of Panama 120 km east of the Panama Canal, midway to the Panama/Colombia border. That island is at the western end of Kuna Yala, an indigenous reserve (also known as the Comarca de San Blas) that stretches along 160 km of the eastern coast of Panama. Smithsonian scientists started working in Kuna Yala in 1970. The field station supported short-term biological studies in addition to as well as long-term meteorological and biological monitoring. Physical Monitoring activities began at the San Blas station in 1992.<br>Monitoring activities included the measurement of air temperature, precipitation, solar radiation, wind speed and direction, sea level, water temperature and salinity.
DOI: 10.6084/m9.figshare.28722197.v1
title: <b>Supplementary material for :"</b><b>The Gut Microbiome Mediates the Beneficial Effects of Pentadecanoic Acid on Bladder Cancer Occurrence and Progression through Lipid Metabolism"</b>

description: <b>Supplementary material for :"</b><b>The Gut Microbiome Mediates the Beneficial Effects of Pentadecanoic Acid on Bladder Cancer Occurrence and Progression through Lipid Metabolism"</b>
DOI: 10.6084/m9.figshare.23611746.v1
title: Supplementary Table S1.xlsx

description: The uploaded dataset contains results of host range testing of two <em>Acinetobacter baumannii </em>phages, EAb13 and EAb1. The latter is a usual phage with a limited host range, while the former has a very broad activity against the panel of diverse clinical isolates including multiple drug-resistant strains. Both phages can be used for therapeutic purposes against multidrug-resistant strains of <em>A. baumannii</em>.
DOI: 10.6084/m9.figshare.23739435.v1
title: Mnova Organic Chemistry Example Problem Sets

description: Example problem sets for teaching organic chemistry using Mnova Spectroscopy Database.
DOI: 10.26180/21671789.v1
title: FACT HRC (FACT-raw): a dataset of Wizard-of-Oz human-robot handovers and collaboration in Functional And Creative Tasks

description: Dataset accompanying our HRI 2023 paper:Leimin Tian, Kerry He, Shiyu Xu, Akansel Cosgun, and Dana Kulić. 2023. Crafting with a Robot Assistant: Use Social Cues to Inform Adaptive Handovers in Human-Robot Collaboration. In Proceedings of the 2023 ACM/IEEE International Conference on Human-Robot Interaction (HRI '23), March 13–16, 2023, Stockholm, Sweden. ACM, New York, NY, USA, 9 pages. (ACM copy, arXiv copy)<br>This record contains one out of three segments of the FACT dataset, namely FACT-raw:<i>Identifiable</i> recordings as ROS bags, including all the synchronised raw data from the two camera feeds, the robot's status, the controls of the teleoperation framework, the estimates of facial and upper body keypoints from the RGB-D camera feed, and the emotion estimates from both camera feeds. (Here is an example script if you want to save raw images or other information from the ROS bags to extract your own features instead of using the upper body keypoints and other extracted data in FACT-processed)<br>Please sign the EULA and send it to <i>Leimin.Tian@monash.edu</i> for approval if you wish to gain access to FACT-raw. Thank you!<br><br>FACT-processed and FACT-support:Please see https://doi.org/10.26180/21671768.v1<br>Related datasets:Extracted csv data from FACT-HRC stage 1 (teleoperated handovers): https://doi.org/10.26180/21671768Raw ROS bag data of FACT-HRC stage 1 (teleoperated handovers): https://doi.org/10.26180/21671789Extracted csv data files of FACT-HRC stage 2 (auto handovers): https://doi.org/10.26180/25449640Raw ROS bag data of FACT-HRC stage 2 (auto handovers): https://doi.org/10.26180/25449652Questionnaire and annotation from FACT-HRC stage 3 (online video comparison): https://doi.org/10.26180/28492796
DOI: 10.6084/m9.figshare.c.3291368_d2.v1
title: Spatiotemporal data on Chinese population distribution from 1949 to 2013

description: Population: This dataset
contains 65-years’ time serial data of whole China (unit: million persons),
each provinces (unit: 10000 persons), and each county. The source data are
originally collected from China Statistical Yearbook from 1949 to 2013. The
county data covers 2000, 2006, 2007, and 2009. In addition, 4 years (1995, 2000,
2005, 2010) population distributions cover the whole land region in China are
also included in this dataset. Such data is expressed as raster format with 1 km
resolution and a projection of Albers. Attribute information mainly includes
population density (unit: number of person per square kilometer). The source data
are originally provided by Data Center for Resources and Environmental
Sciences, Chinese Academy of Sciences (RESDC) (http://www.resdc.cn) and Data Sharing Infrastructure of Earth System Science (http://www.geodata.cn).<br><br>These data are not intended for demarcation. <br>
DOI: 10.60893/figshare.pof.28592831.v1
title: Details of Neural Network Model Construction

description: Due to the limited length of this article, details of neural network modeling, including assembly of the dataset, the construction of the neural network, the selection of training parameters, and the training results can be found in the supplementary material.
DOI: 10.6084/m9.figshare.7212545.v1
title: Transcriptions of letters by Sarah Hartwig, Susanna Klein, and Elizabeth Renner (ed. Fiona Leach).pdf

description: This file contains the full collection of letters by three women (Sarah Hartwig, Susanna Klein, and Elizabeth Renner) involved in the British Mission to West Africa, as transcribed and edited by Fiona Leach. <br><br>The collection is a valuable addition to Brill's <em>Reclaiming the Women of Britain’s First Mission to West Africa: Three Lives Lost and Found</em> by Fiona Leach.<br><br><em>Reclaiming the Women of Britain’s First Mission to West Africa</em> is the compelling story of three long-forgotten women, two white and one black, who lived, worked and died on the Church Missionary Society’s first overseas mission at the dawn of the nineteenth century. It was a time of momentous historical events: the birth of Britain’s missionary movement, the creation of its first African colony as a home for freed slaves, and abolition of the slave trade. Casting its long shadow over much of the women’s story was the protracted war with Napoleon. <br> <br>Taking as its starting point a cache of fifty letters from the three women, the book counters the prevailing narrative that early missionary endeavour was a uniquely European and male affair, and reveals the presence of a surprising number of women, among them several with very forceful personalities. Those who are interested in women’s life history, black history, the history of the slave trade and British evangelism will find this book immensely enjoyable.
DOI: 10.6084/m9.figshare.20343624.v1
title: AML driver mutation list

description: The list of AML and cancer driver mutations used in the WES variant calling analysis.
DOI: 10.6084/m9.figshare.28815287.v3
title: Table S2, MLST type and dDDH values with reference genomes

description: Table S2, MLST type and dDDH values with reference genomes<i>Salmonella</i> isolates were identified using the Genome-to-Genome Distance Calculator (GGDC) against <i>Salmonella </i>reference genomes. Additionally, Identification of acquired AMR genes, plasmid replicon types, and multilocus sequence types was conducted using the Staramr pipeline (v0.11.0) [12], incorporating ResFinder (database version 06.08.2024), PlasmidFinder (database version 08.08.2024), and MLST (v2.23.0).
DOI: 10.6084/m9.figshare.22700056.v4
title: Ocelli Tutorial 2: Hair follicle (ATAC-seq + RNA-seq)

description: Data for Tutorial 2 of Ocelli, available at https://ocelli.readthedocs.io. Includes processed data from the Gene Expression Omnibus under accession number GSE140203 [1]. [1] Ma S, Zhang B, LaFave LM, Earl AS et al. Chromatin Potential Identified by Shared Single-Cell Profiling of RNA and Chromatin. <em>Cell</em> 2020 Nov 12;183(4):1103-1116.e20.
DOI: 10.6084/m9.figshare.20425047.v2
title: Micro-nano carbon spheres

description: Quantitative data related to Fabrication of micro/nano carbon spheres from the sucrose based on oilothermal method with a top-down approach, including minimum stirring speed analysis and sizing analysis of carbon spheres are given in this dataset.
DOI: 10.6084/m9.figshare.13222070.v1
title: Structural determination of fasamycin and formicamycin congeners isolated from regulator mutants of S. formicae

description: Structural determination of fasamycin and formicamycin congeners isolated from regulator mutants of S. formicae. See manuscript for details including methodology.
DOI: 10.6084/m9.figshare.14268705.v1
title: Multi-categorical classification using deep learning applied to the diagnosis of gastric cancer

description: ABSTRACT Introduction: Pathologists currently face a substantial increase in workload and complexity of their diagnosis work on different types of cancer. This is due to the increased incidence and detection of neoplasms, associated with diagnostic subspecialization and the advent of personalized medicine. There are numerous treatments available for different types of cancer, and the diagnosis must be dispensed quickly and accurately for each case. Deep learning is a tool that has been used in daily life, including image detection, and there is growing interest in its application in Medicine and especially in Pathology, where it has a revolutionary potential. Objective: In this article, we present deep learning, in particular convolutional neural networks, as a potential technique for the analysis of digitized images of histopathological slides, detecting identifiable patterns in an automated manner, introducing the possibility of applying this technology as an auxiliary tool in the diagnosis of neoplasms, especially in gastric cancer, the object of this preliminary study. Method: From a database of digitized images of histopathological slides representative of gastric cancer, we identified three morphological patterns of neoplasia, as well as non-neoplastic tissue patterns, with which we train a convolutional neural network algorithm, designed to identify and categorize similar images within these standards, in an automated manner. Results: The results of identification and automatic classification in the defined categories were satisfactory, with ROC curves above 0.9. Conclusion: The results show the potential application of convolutional neural networks for digitized slides of gastric cancer, in accordance with international literature findings.
DOI: 10.6084/m9.figshare.14306352.v1
title: Inequalities in mammography and Papanicolaou test coverage: a time-series study

description: ABSTRACT BACKGROUND: Cancer is a serious public issue problem worldwide. In Brazil, breast cancer is the most common type and cervical cancer is the third most frequent among women. OBJECTIVE: To analyze the temporal trend of coverage of mammography and cervical oncotic cytological testing, between 2007 and 2018. DESIGN AND SETTING: Time-series study conducted in the 26 Brazilian state capitals and in the Federal District. METHODS: A linear regression model was used to estimate trends in coverage of mammography and cervical oncotic cytological testing over the period. The data collection system for Surveillance of Risk and Protection Factors for Chronic Diseases by Telephone Survey (Vigitel) was used. RESULTS: A significant increase in mammography coverage was observed, from 71.1% in 2007 to 78.0% in 2018. There was a trend towards an increase among women with 0 to 8 years of schooling, in all regions of Brazil. Regarding cervical oncotic cytological testing coverage, there was a trend towards stability during the period analyzed, reaching 81.7% in 2018. On the other hand, there was a significant increase in the northern region. CONCLUSIONS: There was an improvement in the coverage of these screening examinations, especially regarding mammography. However, it is still necessary to expand their provision, quality and surveillance, aimed towards women's health.
DOI: 10.6084/m9.figshare.17144066.v1
title: atlas_8.5.h5ad

description: Highly multiplexed spatially resolved gene expression profiling of mouse organogenesis
DOI: 10.6084/m9.figshare.24872043.v1
title: Other Supplementary Materials for Surface Deformations of the February 6, 2023 Earthquake Sequence, eastern Türkiye

description: This is the document that contains the <b>Other Supplementary Materials for </b><b>Surface Deformations of the February 6, 2023 Earthquake Sequence, eastern Türkiye</b>, which the13 big files can be easily access through their doi.
DOI: 10.6084/m9.figshare.26262308.v1
title: Classification of Viral Pneumonia Disease: Dataset of the Normal Class

description: Pneumonia is regarded as a dangerous and harmful disease worldwide. Indeed, pneumonia can be fatal if not treated swiftly with medications. As a result, early identification of pneumonia improves the chances of recovery and reduces mortality. X-rays are one of the most significant diagnostic techniques for pneumonia. Because of its cheaper diagnostic expenses, the chest X-ray is commonly employed in the diagnosis of numerous lung disorders (such as breast cancer, pneumonia, tuberculosis, and so on). Indeed, diagnosis can be subjective for a variety of reasons, including the presentation of disease, which may be ambiguous in chest X-ray pictures or mistaken with other conditions. Therefore, the research aims to build five Machine Learning Models and five Deep learning applying transfer learning approaches to classify pneumonia disease. The methodology entails SVM, DT, LR, KNN, and RF classifiers together with GoogleNet, DenseNet-121, VGG-19, MobileNet-V2, and AlexNet. This would help in early diagnosis, and disease progression awareness, ease the diagnosis process to a great extent and fast-track the entire process of radiological imaging results.
DOI: 10.6084/m9.figshare.16823443.v3
title: Consent

description: Consent forms
DOI: 10.6084/m9.figshare.14170724.v1
title: Magnetometer calibration

description: Dataset for magnetometer calibration
DOI: 10.6084/m9.figshare.5125972.v1
title: Supplementary Material for: The Neuroprotection Exerted by Memantine, Minocycline and Lithium, against Neurotoxicity of CSF from Patients with Amyotrophic Lateral Sclerosis, Is Antagonized by Riluzole

description: In a recent study we found that cerebrospinal fluids (CSFs) from amyotrophic lateral sclerosis (ALS) patients caused 20-30% loss of cell viability in primary cultures of rat embryo motor cortex neurons. We also found that the antioxidant resveratrol protected against such damaging effects and that, surprisingly, riluzole antagonized its protecting effects. Here we have extended this study to the interactions of riluzole with 3 other recognized neuroprotective agents, namely memantine, minocycline and lithium. We found: (1) by itself riluzole exerted neurotoxic effects at concentrations of 3-30 µM; this cell damage was similar to that elicited by 30 µM glutamate and a 10% dilution of ALS/CSF; (2) memantine (0.1-30 µM), minocycline (0.03-1 µM) and lithium (1-80 µg/ml) afforded 10-30% protection against ALS/CSF-elicited neurotoxicity, and (3) at 1-10 µM, riluzole antagonized the protection afforded by the 3 agents. These results strongly support the view that at the riluzole concentrations reached in the brain of patients, the neurotoxic effects of this drug could be masking the potential neuroprotective actions of new compounds being tested in clinical trials. Therefore, in the light of the present results, the inclusion of a group of patients free of riluzole treatment may be mandatory in future clinical trials performed in ALS patients with novel neuroprotective compounds.
DOI: 10.6084/m9.figshare.25057739.v1
title: Spasic: PBMC and Bone Marrow Immunoprofiling data files - spectral flow cytometry data used for development of three immunoprofiling panels in blood and bone marrow.

description: Data files for development of spectral flow cytometry pipelines for immunoprofiling of PBMCs and bone marrow cells. There are two panels for use on peripheral blood mononuclear cells (PBMCs) titled: 'TB' and 'MND'. There is a third panel for use on bone marrow cells. Data are segmented by cell type (PBMC or bone marrow), and then panel used on those samples. Both sample data as well as reference controls used are included in each subfolder. These files were used in our manuscript titled "Spectral Flow Cytometry Methods and Pipelines for Comprehensive Immunoprofiling of Human Peripheral Blood and Bone Marrow."