cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.b3ha2f
title: Occurrence Download

description: A dataset containing 271 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Benthodesmus elongatus (Clarke, 1879)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 271 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039083-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3845770_d1
title: Additional file 1: of Transcriptome profiling of tobacco (Nicotiana tabacum) pollen and pollen tubes

description: Sequences of all unigenes in FASTA format. (ZIP 16486 kb)
DOI: 10.6084/m9.figshare.c.3845770_d2.v1
title: Additional file 2: Table S1. of Transcriptome profiling of tobacco (Nicotiana tabacum) pollen and pollen tubes

description: Unigene Annotation based on the SGN tobacco unigene database. (XLSX 6422 kb)
DOI: 10.6084/m9.figshare.c.3845770_d2
title: Additional file 2: Table S1. of Transcriptome profiling of tobacco (Nicotiana tabacum) pollen and pollen tubes

description: Unigene Annotation based on the SGN tobacco unigene database. (XLSX 6422 kb)
DOI: 10.6084/m9.figshare.c.3845770_d3.v1
title: Additional file 3: Table S2. of Transcriptome profiling of tobacco (Nicotiana tabacum) pollen and pollen tubes

description: Full-length cDNAs identified using TargetIdentifier. (XLSX 4144 kb)
DOI: 10.6084/m9.figshare.c.3845770_d3
title: Additional file 3: Table S2. of Transcriptome profiling of tobacco (Nicotiana tabacum) pollen and pollen tubes

description: Full-length cDNAs identified using TargetIdentifier. (XLSX 4144 kb)
DOI: 10.6084/m9.figshare.c.3845779_d1.v1
title: Additional file 1: Table S1. of Effect of neoadjuvant chemotherapy on tumor-infiltrating lymphocytes and PD-L1 expression in breast cancer and its clinical significance

description: (XLSX 23Â kb)
DOI: 10.15468/dl.98dztm
title: Occurrence Download

description: A dataset containing 26521 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "Continent is Europe",
 "MediaType is Image",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Camponotus ligniperdus (Latreille, 1802), Camponotus vagus (Scopoli, 1763), Dolichoderus quadripunctatus (Linnaeus, 1771), Coptoformica Müller, 1923, Formica exsecta Nylander, 1846, Formica rufa Linnaeus, 1761, Formica fusca Linnaeus, 1758, Formicoxenus nitidulus (Nylander, 1846), Hypoponera Santschi, 1938, Ponera Latreille, 1804, Lasius flavus (Fabricius, 1782), Lasius fuliginosus (Latreille, 1798), Lasius umbratus (Nylander, 1846), Lasius niger (Linnaeus, 1758), Lasius brunneus (Latreille, 1798), Lasius platythorax Seifert, 1991, Leptothorax acervorum (Fabricius, 1793), Leptothorax muscorum (Nylander, 1846), Myrmecina graminicola (Latreille, 1802), Myrmica rubra (Linnaeus, 1758), Tetramorium caespitum (Linnaeus, 1758), Temnothorax nylanderi nylanderi, Temnothorax nylanderi (Förster, 1850), Tetramorium atratulum (Schenck, 1852), Tapinoma erraticum (Latreille, 1798))",
 "Year 2005-2024"
 ]
}

 The dataset includes 26521 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039084-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nyxzv7
title: Occurrence Download

description: A dataset containing 374 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Medicinal potential of African plants (Togo)"
 ]
}

 The dataset includes 374 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039085-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7303/syn64418319.1
title: MRI T2 SAG
DOI: 10.15468/dl.89duv9
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Benthodesmus pacificus Parin & Becker, 1970",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039086-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3845836_d3.v1
title: Additional file 3: Table S1. of Regulation of gene expression in roots of the pH-sensitive Vaccinium corymbosum and the pH-tolerant Vaccinium arboreum in response to near neutral pH stress using RNA-Seq

description: Lists of genes with differential expression in blueberry under pH stress. Significant genes in VC (A), VA (B) and their different response (C). Based on the quasi-likelihood F test. pÂ
DOI: 10.6084/m9.figshare.c.3845836_d6
title: Additional file 6: Table S4. of Regulation of gene expression in roots of the pH-sensitive Vaccinium corymbosum and the pH-tolerant Vaccinium arboreum in response to near neutral pH stress using RNA-Seq

description: Summary of discussed genes. Collection of genes present in discussion organized by function. The columns represent category/gene ID, description of best UniProt protein homolog, description of best Arabidopsis protein homolog, log fold change (FC) in V. arboreum and logFC in V. corymbosum. (XLSX 17 kb)
DOI: 10.15468/dl.9unb28
title: Occurrence Download

description: A dataset containing 15045 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Viola calcarata L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 15045 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039087-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3845845_d1.v1
title: Additional file 1: of Identification of SNPs associated with muscle yield and quality traits using allelic-imbalance analyses of pooled RNA-Seq samples in rainbow trout

description: Putative SNPs and SNPs with allelic imbalances in association with total body weight, muscle yield, muscle fat content, shear force, and whiteness. SNP chromosome position, alleles, functional classification, associated gene ID and FASTA sequences are provided. (CSV 15332 kb)
DOI: 10.6084/m9.figshare.c.3845845_d1
title: Additional file 1: of Identification of SNPs associated with muscle yield and quality traits using allelic-imbalance analyses of pooled RNA-Seq samples in rainbow trout

description: Putative SNPs and SNPs with allelic imbalances in association with total body weight, muscle yield, muscle fat content, shear force, and whiteness. SNP chromosome position, alleles, functional classification, associated gene ID and FASTA sequences are provided. (CSV 15332 kb)
DOI: 10.15468/dl.7d6qmj
title: Occurrence Download

description: A dataset containing 57508 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Cuscuta epithymum (L.) L."
 ]
}

 The dataset includes 57508 records from 790 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039081-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3845857_d11
title: Additional file 7: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa

description: Original alignment for SIAH3 subtree. 13 vertebrate SIAH3 sequences, no trimmed positions. (FASTA 4 kb)
DOI: 10.6084/m9.figshare.c.3845857_d12
title: Additional file 8: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa

description: Refined alignment for SIAH1 subtree. 19 vertebrate SIAH1 sequences, trimmed according to Methods. (FASTA 6 kb)
DOI: 10.6084/m9.figshare.c.3845857_d13
title: Additional file 9: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa

description: Refined alignment for SIAH2 subtree. 18 vertebrate SIAH2 sequences, trimmed according to Methods. (FASTA 7 kb)
DOI: 10.6084/m9.figshare.5286046
title: RR_Weights_n6/n3_Rawdata.xlsx

description: Raw data of animal weight gain and n-6/n-3 fatty acid profiles<br>
DOI: 10.7303/syn64418378.1
title: MRI T2 TRA
DOI: 10.6084/m9.figshare.c.3846724_d2.v1
title: Additional file 2: of Consensus strategy in genes prioritization and combined bioinformatics analysis for preeclampsia pathogenesis

description: Microarrays consensus. The file comprises all information concerning the microarray data as well as the integration. (XLSX 141 kb)
DOI: 10.6084/m9.figshare.c.3846724_d2
title: Additional file 2: of Consensus strategy in genes prioritization and combined bioinformatics analysis for preeclampsia pathogenesis

description: Microarrays consensus. The file comprises all information concerning the microarray data as well as the integration. (XLSX 141 kb)
DOI: 10.15468/dl.g5zmgz
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Benthodesmus simonyi (Steindachner, 1891)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 21 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039089-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13616726
title: Data from: Autumn and winter plankton composition and size structure in the North Sea

description: Plankton dynamics in temperate ecosystems have been mainly studied during productive seasons, with comparatively less research conducted during the winter, particularly on microplankton. Implementing plankton sampling during a regular fishery cruise, we investigated the North Sea micro- and mesozooplankton community composition, abundance and size structure (55-2000 µm) during autumn (Buchan/Banks area) and winter (Downs area) between 2013 and 2019. Samples were analyzed using image-based techniques. Community diversity (broad taxa) was relatively similar across years in both areas, with diatoms and tripos taxa sets dominating the microplankton community and gastropods and copepods the mesozooplankton one. The average micro- to mesoozooplankton ratio (in abundance) was 90:1 for Buchan/Banks, resulting in average Normalized Abundance Size Spectra (NASS) slopes of -1.45 ±0.18 SD. For Downs, the micro- to mesoozooplankton ratio was 235:1 and steeper NASS slopes of -1.67 ±0.20 SD due to a lower contribution of large organisms. Interannual changes in the planktonic community for each area and their potential environmental drivers were examined using a redundancy analysis (including taxonomy and size) and a correlation analysis using NASS slopes (size only). Both approaches highlighted the importance of water mass properties (e.g. salinity, temperature, turbidity) in shaping plankton dynamics, although the amount of explained variance differed between approaches (11 versus 46%). Our results contribute to a better understanding of standing stocks of plankton and their environmental drivers. Specifically, novel insights were gained into microplankton dynamics, which play an important role in supporting the growth and survival of winter-spawned fish larvae in the North Sea.
DOI: 10.5281/zenodo.13616727
title: Data from: Autumn and winter plankton composition and size structure in the North Sea

description: Plankton dynamics in temperate ecosystems have been mainly studied during productive seasons, with comparatively less research conducted during the winter, particularly on microplankton. Implementing plankton sampling during a regular fishery cruise, we investigated the North Sea micro- and mesozooplankton community composition, abundance and size structure (55-2000 µm) during autumn (Buchan/Banks area) and winter (Downs area) between 2013 and 2019. Samples were analyzed using image-based techniques. Community diversity (broad taxa) was relatively similar across years in both areas, with diatoms and tripos taxa sets dominating the microplankton community and gastropods and copepods the mesozooplankton one. The average micro- to mesoozooplankton ratio (in abundance) was 90:1 for Buchan/Banks, resulting in average Normalized Abundance Size Spectra (NASS) slopes of -1.45 ±0.18 SD. For Downs, the micro- to mesoozooplankton ratio was 235:1 and steeper NASS slopes of -1.67 ±0.20 SD due to a lower contribution of large organisms. Interannual changes in the planktonic community for each area and their potential environmental drivers were examined using a redundancy analysis (including taxonomy and size) and a correlation analysis using NASS slopes (size only). Both approaches highlighted the importance of water mass properties (e.g. salinity, temperature, turbidity) in shaping plankton dynamics, although the amount of explained variance differed between approaches (11 versus 46%). Our results contribute to a better understanding of standing stocks of plankton and their environmental drivers. Specifically, novel insights were gained into microplankton dynamics, which play an important role in supporting the growth and survival of winter-spawned fish larvae in the North Sea.
DOI: 10.6084/m9.figshare.c.3846757_d1
title: Additional file 1: of High prevalence of co-infection between human papillomavirus (HPV) 51 and 52 in Mexican population

description: HPV genotypes data. The file includes the hybrid capture and genotyping results for each sample and age ranges. The information of gender and age were removed to maintain participant confidentiality. (XLSX 44 kb)
DOI: 10.6084/m9.figshare.c.3846727_d6.v1
title: Additional file 6: of Screening of nucleotide variations in genomic sequences encoding charged protein regions in the human genome

description: Insertions occurring within negative charge clusters (NCCs). (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3846727_d6
title: Additional file 6: of Screening of nucleotide variations in genomic sequences encoding charged protein regions in the human genome

description: Insertions occurring within negative charge clusters (NCCs). (XLSX 10Â kb)
DOI: 10.5284/1124415
title: Images and Text from a Level 2 Building Recording Survey at 17 New Street Worcester, Worcestershire, January 2024

description: This archive consists of text and images from a level 2 building recording survey by Acer Archaeology and Heritage, at 17 New Street Worcester, in January 2024. This is prior to the proposed redevelopment of the grate 2 listed building.
DOI: 10.6084/m9.figshare.c.3846778_d2.v1
title: MOESM2 of Development of novel genic microsatellite markers from transcriptome sequencing in sugar maple (Acer saccharum Marsh.)

description: Additional file 2. Summary report of all EST-SSRs. The summary statistics and primer sequences are given for all EST-SSRs. Gene annotations are provided for the newly developed EST-SSR markers.
DOI: 10.6084/m9.figshare.c.3846778_d2
title: MOESM2 of Development of novel genic microsatellite markers from transcriptome sequencing in sugar maple (Acer saccharum Marsh.)

description: Additional file 2. Summary report of all EST-SSRs. The summary statistics and primer sequences are given for all EST-SSRs. Gene annotations are provided for the newly developed EST-SSR markers.
DOI: 10.6084/m9.figshare.c.3846772_d10.v1
title: Additional file 3: of Role of the GRAS transcription factor ATA/RAM1 in the transcriptional reprogramming of arbuscular mycorrhiza in Petunia hybrida

description: Table listing the complete gene data set of this study. (XLSX 4836 kb)
DOI: 10.6084/m9.figshare.c.3846772_d11.v1
title: Additional file 4: of Role of the GRAS transcription factor ATA/RAM1 in the transcriptional reprogramming of arbuscular mycorrhiza in Petunia hybrida

description: Table listing the genes induced at least 5-fold in the wild type and their expession in ram1. All AM-incucible genes were sorted according to their predicted functional category as in Fig. 2. Expression values (RPKM) are given for mycorrhizal wild type (wt-M_RPKM means), wild type control roots (wt-NM_RPKM means), mycorrhizal ram1 (ram1-M_RPKM means), and ram1 control roots (ram1-M_RPKM means). The respective induction ratio (AM vs. control roots) are given for the wildtype (column P) and ram1 (Column BB). (XLSX 542 kb)
DOI: 10.5281/zenodo.14514083
title: Gross-Zimmern Apotheke

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope):

https://kalliope-verbund.info/ead?ead.id=DE-611-BF-70963

Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.6084/m9.figshare.c.3846772_d10
title: Additional file 3: of Role of the GRAS transcription factor ATA/RAM1 in the transcriptional reprogramming of arbuscular mycorrhiza in Petunia hybrida

description: Table listing the complete gene data set of this study. (XLSX 4836 kb)
DOI: 10.6084/m9.figshare.c.3846772_d11
title: Additional file 4: of Role of the GRAS transcription factor ATA/RAM1 in the transcriptional reprogramming of arbuscular mycorrhiza in Petunia hybrida

description: Table listing the genes induced at least 5-fold in the wild type and their expession in ram1. All AM-incucible genes were sorted according to their predicted functional category as in Fig. 2. Expression values (RPKM) are given for mycorrhizal wild type (wt-M_RPKM means), wild type control roots (wt-NM_RPKM means), mycorrhizal ram1 (ram1-M_RPKM means), and ram1 control roots (ram1-M_RPKM means). The respective induction ratio (AM vs. control roots) are given for the wildtype (column P) and ram1 (Column BB). (XLSX 542 kb)
DOI: 10.15468/dl.mp9ak2
title: Occurrence Download

description: A dataset containing 12572 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Togo National Herbarium Database"
 ]
}

 The dataset includes 12572 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039090-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3846823_d1.v1
title: MOESM10 of Immuno-diagnosis of Mycobacterium tuberculosis in sputum, and reduction of timelines for its positive cultures to within 3Â h by pathogen-specific thymidylate kinase expression assays

description: Additional file 10. This file offers details of raw and adjusted ODs for TMKmt Ag detection in each serial dilutions of a 1+ AFB patient sputum sample.
DOI: 10.6084/m9.figshare.c.3846823_d1
title: MOESM10 of Immuno-diagnosis of Mycobacterium tuberculosis in sputum, and reduction of timelines for its positive cultures to within 3Â h by pathogen-specific thymidylate kinase expression assays

description: Additional file 10. This file offers details of raw and adjusted ODs for TMKmt Ag detection in each serial dilutions of a 1+ AFB patient sputum sample.
DOI: 10.15468/dl.c5b6sr
title: Occurrence Download

description: A dataset containing 443 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Benthosema glaciale (Reinhardt, 1837)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 443 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039091-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3846817_d4.v1
title: Additional file 4: of The purplish bifurcate mussel Mytilisepta virgata gene expression atlas reveals a remarkable tissue functional specialization

description: Complete results of gene set enrichment analyses. (XLSX 29Â kb)
DOI: 10.6084/m9.figshare.c.3846817_d4
title: Additional file 4: of The purplish bifurcate mussel Mytilisepta virgata gene expression atlas reveals a remarkable tissue functional specialization

description: Complete results of gene set enrichment analyses. (XLSX 29Â kb)
DOI: 10.6084/m9.figshare.c.3846865_d4.v1
title: Additional file 4: of Transplanted human fecal microbiota enhanced Guillain BarrĂŠ syndrome autoantibody responses after Campylobacter jejuni infection in C57BL/6 mice

description: Python code used to generate heatmap for 60 most abundant OTUs in humanized and conventional mice. OTUs were sorted, the 60 most abundant OTUs retrieved, and those OTUs clustered according to relative abundance using python (v 3.5) and seaborn (version 0.7.1). OTU abundance increases from light green to dark green. Left y-axis labels (network_pal) corresponds to the microbiota or inoculum; Humanized =brown; Conventional = bluegreen; inoculum = Teal. Right y-axis labels represent individual samples starting with group labels. Group labels; HI2= Humanized-Infected-260.94, HUT= Humanized-Uninfected-TSB, HI1= Humanized-Infected-11168, CI2= Conventional-Infected-260.94, CUT= Conventional-Uninfected-TSB, CI1= Conventional-Infected-11168, INO= Inoculum. (MD 4Â kb)
DOI: 10.6084/m9.figshare.c.3846823_d9.v1
title: MOESM7 of Immuno-diagnosis of Mycobacterium tuberculosis in sputum, and reduction of timelines for its positive cultures to within 3Â h by pathogen-specific thymidylate kinase expression assays

description: Additional file 7. This file offers details of TMKmt Ag expression among the Ugandan genotype 1 and H37RV.
DOI: 10.15468/dl.hx99zr
title: Occurrence Download

description: A dataset containing 16489 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is French Guiana",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Anacardium L., Mangifera L., Tapirira Aubl., Annona L., Guatteria Ruiz & Pav., Jacaranda Juss., Bixa L., Vismia Vand., Laguncularia C.F.Gaertn., Terminalia L., Croton L., Hura L., Pera Mutis, Sapium Jacq., Maprounea Aubl., Casearia Jacq., Persea Mill., Inga Mill., Virola Aubl., Cecropia Loefl., Psidium L., Eucalyptus L'Hér., Piper L., Coccoloba P.Browne, Isertia Schreb., Citrus L., Theobroma L., Avicennia L.)"
 ]
}

 The dataset includes 16489 records from 123 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039093-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.