cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.w6jh9c
title: Occurrence Download

description: A dataset containing 35361 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chaetocerotaceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 35361 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002969-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vkxjut
title: Occurrence Download

description: A dataset containing 1117 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Saudi Arabia",
 "DatasetKey is one of (The Vascular Plant Collection at the Herbarium Tubingense, KSA Flora Survey 2013, Geneva Herbarium – General Collection (G), Edinburgh (E) Herbarium Specimens)",
 "Geometry POLYGON((41.38927317916294 22.526784644517903,45.12750047005983 22.526784644517903,45.12750047005983 26.26501193541479,41.38927317916294 26.26501193541479,41.38927317916294 22.526784644517903))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 1117 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002971-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ed9v8
title: Occurrence Download

description: A dataset containing 9621 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coscinodiscaceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9621 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002972-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28299551
title: mdd2024symptoms

description: GWAS sumstats from the Psychiatric Genomics Consortium
DOI: 10.15468/dl.uhng39
title: Occurrence Download

description: A dataset containing 9545 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tremarctos Gervais, 1855"
 ]
}

 The dataset includes 9545 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002974-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yc2pkd
title: Occurrence Download

description: A dataset containing 1336 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melosiraceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1336 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002973-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cuzcyv
title: Occurrence Download

description: A dataset containing 7287 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euterpe catinga Wallace"
 ]
}

 The dataset includes 7287 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002975-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j6f423
title: Occurrence Download

description: A dataset containing 5883 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Penilia avirostris Dana, 1849"
 ]
}

 The dataset includes 5883 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002976-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5f8hj4
title: Occurrence Download

description: A dataset containing 7763 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Skeletonemaceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7763 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002977-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25766025
title: ASV-RepresentativeASVs_MontereyNorthPacific.fna

description: representative ASV sequences, corresponding to DADA2-based feature table of all v1v2 amplicon samples from Monterey Bay and the eastern North Pacific Ocean.
DOI: 10.6084/m9.figshare.25766025.v1
title: ASV-RepresentativeASVs_MontereyNorthPacific.fna

description: representative ASV sequences, corresponding to DADA2-based feature table of all v1v2 amplicon samples from Monterey Bay and the eastern North Pacific Ocean.
DOI: 10.15468/dl.txb5qr
title: Occurrence Download

description: A dataset containing 7287 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euterpe catinga Wallace"
 ]
}

 The dataset includes 7287 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002979-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25762380
title: ASV-FeatureTable_MontereyNorthPacific_readcounts.tsv

description: Raw DADA2-based feature table of all v1v2 amplicon samples from Monterey Bay and the eastern North Pacific Ocean.
DOI: 10.6084/m9.figshare.25762380.v1
title: ASV-FeatureTable_MontereyNorthPacific_readcounts.tsv

description: Raw DADA2-based feature table of all v1v2 amplicon samples from Monterey Bay and the eastern North Pacific Ocean.
DOI: 10.15468/dl.qutuqe
title: Occurrence Download

description: A dataset containing 191 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Skeletonemataceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 191 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002980-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14751158
title: 18 Neutrino Data
DOI: 10.5281/zenodo.14751159
title: 18 Neutrino Data
DOI: 10.15468/dl.gvv575
title: Occurrence Download

description: A dataset containing 9568 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hemiaulaceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9568 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002981-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25751352
title: Legionellales_16SrRNA.tree.nwk

description: Phylogenetic tree based on 16S rRNA gene sequences of Coxiellales, Legionellales and related sequences.
DOI: 10.6084/m9.figshare.25751352.v1
title: Legionellales_16SrRNA.tree.nwk

description: Phylogenetic tree based on 16S rRNA gene sequences of Coxiellales, Legionellales and related sequences.
DOI: 10.15468/dl.wyvsqe
title: Occurrence Download

description: A dataset containing 625170 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 625170 records from 758 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002932-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25751355
title: Rickettsiales_16SrRNA.tree.nwk

description: Phylogenetic Tree of Rickettsiales, based on 16S rRNA gene sequences
DOI: 10.6084/m9.figshare.25751355.v1
title: Rickettsiales_16SrRNA.tree.nwk

description: Phylogenetic Tree of Rickettsiales, based on 16S rRNA gene sequences
DOI: 10.5519/qd.21tov64c
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (354 records)
DOI: 10.5281/zenodo.14751154
title: 19 Neutrino Data
DOI: 10.5281/zenodo.14751155
title: 19 Neutrino Data
DOI: 10.15468/dl.3qfapd
title: Occurrence Download

description: A dataset containing 80541 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zosteraceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 80541 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002982-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f2yc2n
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Polytelis swainsonii",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004150-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.23719/1530095
title: Datasets for manuscript: The impact of legacy nutrient loading from lake sediments on cyanobacteria bloom severity

description: The GitHub site contains the code and data to run two methods as shown in the manuscript. The first quantifies external load, internal load, and source attributed impact on cyanoHAB severity. This method was written using R language (version 4.2.2). The second method maps potential legacy P stores in upstream watersheds of Lake Mendota, WI (USA) and estimates the total P load per contributing area across watersheds. This method was written using Python language (version 3.8.5) & GeoPandas (version 0.8.2).
1. Impact_model_method
The impact model method is a series of sequential programs that take original source data, performs quality control checks and re-formats the data as new data files for input into the impact model. The Impact_model_method folder has all programs used in this method. All code is written in R Markdown format (.Rmd). Here's the order to run the R programs and achieve the same results as shown in the manuscript:
cyanoHAB_severity.Rmd - calculates cyanoHAB severity (as Chl-a and cyanobacteria density)
TotalP_external_atmdep.Rmd - calculates external total P loads from atmospheric deposition
TotalP_external_inflows.Rmd - calculates external total P loads from inflows (streams)
TotalP_external_all.Rmd - calculates the sum of external total P loads (streams + atmospheric deposition)
EpiVolume.Rmd - calculates the change in volume of the epilimnion using temperature profiles
TotalP_water.Rmd - calculates the total P concentration in the epilimnion, total P concentration in the hypolimnion, and ratio of total P in hypolimnion to epilimnion (as alternative indicator of internal P load)
TotalP_internal.Rmd - calculates internal total P loads (or alternatively the ratio of totalP_hypo:totalP_epi)
Model_inputs.Rmd - prepares the data as input for impact modeling (defines predictor and response variables)
Impact_model.Rmd - performs the statistical modeling for impact analysis on cyanoHAB severity by source (external vs internal) and outputs the partitioned sum of squares for each predictor term
2. Spatial_model_method
The spatial model method takes original source data, performs quality control checks and re-formats the data as new data files for input into the spatial model. The model maps potential legacy P stores in upstream sub-watersheds, and quantify total P load per contributing area across sub-watersheds. All programs used in this method are provided in the Spatial_model_method folder. All code is written in Python language (.py or .ipynb). The specific order in which programs should be run to achieve the same results as shown in the manuscript is as follows:
HydroGraph_functios.py - performs the network mapping of sub-watersheds upstream of the inflows to the lake
watershed_analysis.ipynb - calculates the P export per contributing area for each of the upstream sub-watersheds
OHSA.py - performs the optimized hot spot analysis for determining statistically clustered stream monitoring sites with consistently high P concentrations.
DOI: 10.23719/1529987
title: Chemical ionization mass spectrometry data from thermal treatment of PFOA

description: Chemical ionization mass spectrometry data from thermal treatment of PFOA in EPA's pilot scale Rainbow furnace. Definitions of variables included in dataset.
DOI: 10.23719/1532457
title: Whale Baleen to Monitor PFAS in Marine Environments

description: Concentration data describing PFAS in whale baleen samples.
DOI: 10.23719/1532468
title: Data for Global importance of nitrogen fixation across inland and coastal waters

description: A description of the dataset can be found at: https://aslopubs.onlinelibrary.wiley.com/doi/10.1002/lol2.10459.
DOI: 10.23719/1532492
title: Data from: How Hurricanes Irma and Maria affected population dynamics and nutrient content of Aedes aegypti in San Juan, PR, USA: socioeconomic and temporal factors

description: Urban environments often contain mosquito species that are responsible for transmitting medically important pathogens to humans. Large disturbance events, like hurricanes, can devastate large urban areas, especially in the tropics; however, little data exist for how these storms affect vector populations. During September 2017, Hurricanes Irma (category 5) and Maria (category 4) passed in proximity to the island of Puerto Rico, USA, causing significant damage to the built environment and significantly altering the abiotic environmen,t including the removal of the plant canopy. We measured adult Aedes aegypti populations, the main vector of several pathogens, and larval containers across eight neighborhoods in San Juan, the capitol, that varied in socioeconomic status (SES) across eight sampling periods over 17 months following the storms. We also analyzed the nutrient content (%N, %C, C:N) and stable isotopes (δ15N, δ13C) from adults and isotopes from containers to assess how the nutrient environments changed post hurricanes. Mosquito population sizes were invariant throughout sampling, although more females were collected in lower SES neighborhoods that were more enriched in δ15N compared to higher SES locations. We did find that the storms altered the stoichiometric content of adults, with lower C:N values right after compared to a year later; larval containers showed an increase in δ15N through time. The lack of any interactive effects of the storms on specific neighborhoods suggests that Irma and Maria affected all locations equally, however, the storms altered the nutrient content of both adults and larval containers, a result with implications for pathogen transmission.
DOI: 10.23719/1529847
title: A Review of the Potential Endocrine Bioactivity of 2-Ethylhexyl 4-Hydroxybenzoate (2-EHHB) - Supplementary Files

description: This includes various EPA contract lab conducted studies using 2EHHB and referenced in a 2EHHB Review manuscript.
DOI: 10.23719/1532522
title: Census Tract EQI

description: The Environmental Quality Index (EQI) accounts for the multiple domains of the environment with which humans interact. These domains include chemical, natural, built, and sociodemographic environments that have both positive and negative influences on health. An overall EQI was created for census tracts within the contiguous United States for 2006-2010 and 2011-2015. Provided data sets include full EQI for 2006-2010 and 20011-2015, variables used to create the census tract EQI, as well as links to maps of the data.
DOI: 10.23719/1531896
title: Control Performance Of Amphibian Metamorphosis Assays With Xenopus Laevis 

description: This paper presents data from studies performed to satisfy test orders from the US EPA’s Endocrine Disruptor Screening Program. Data Evaluation Records were used to collate the control variability and performance of biological endpoints in AMAs conducted in different laboratories, then supplemented with additional recent studies. We examine the statistical power of AMA endpoint analysis and assess whether historical control data (HCD) can assist evidence-based interpretation of the endpoints, with 52 studies from 7 different laboratories.
DOI: 10.23719/1531901
title: Lead Sampling in Two Cities

description: Lead concentrations in drinking water samples collected under various sampling protocols in homes with lead service lines and in homes without lead service lines in two US cities.
DOI: 10.23719/1532338
title: SM TS-2 to 5_THM analysis results (data for the 2018 sampling)

description: THM analysis results for water samples taken from the raw water and water treatment plant during the 2018 flood event. The water samples were chlorinated at 1,3,5 mg/L free chlorine.
DOI: 10.23719/1532505
title: DNA virus dynamics and diversity across different stages of wastewater treatment plant in southwest Ohio

description: The data consists of sequence reads generated from an Illumina MiSeq.
DOI: 10.15468/dl.tmnt7j
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Poa lanigera",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 17 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004152-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.23719/1532485
title: 2025 Grand Lake St. Marys flow cytometry data for planktothrix

description: This data set includes flow cytometry data for planktothrix in samples collected from Gran Lake St. Marys and downstream waterways in 2025
DOI: 10.5281/zenodo.17173147
title: FIShBOT Archive 2025-09-22

description: This dataset is a static snapshot of the FIShBOT data product before new data are aggregated. This version of fishbot is archived for reproducibility and is not updated. The data are aggregated from the FIShBOT system, which collects and processes oceanographic from fishery dependent and independent sources.
DOI: 10.5281/zenodo.17173148
title: FIShBOT Archive 2025-09-22

description: This dataset is a static snapshot of the FIShBOT data product before new data are aggregated. This version of fishbot is archived for reproducibility and is not updated. The data are aggregated from the FIShBOT system, which collects and processes oceanographic from fishery dependent and independent sources.
DOI: 10.23719/1532484
title: 2024 Grand Lake St. Marys flow cytometry data for planktothrix

description: This data set includes flow cytometry data for planktothrix in samples collected from Grand Lake St. Marys and downstream waterways in 2024.
DOI: 10.15468/dl.zkteuy
title: Occurrence Download

description: A dataset containing 403901 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Geometry POLYGON((7.89033 17.05025,14.05743 17.05025,14.05743 86.27591,7.89033 86.27591,7.89033 17.05025))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Urtica dioica, Urtica dioica, Urtica dioica, Urtica dioica × kioviensis, Urtica dioica x kioviensis)"
 ]
}

 The dataset includes 403901 records from 631 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004132-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u7c3x5
title: Occurrence Download

description: A dataset containing 15922 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Geranium carolinianum)"
 ]
}

 The dataset includes 15922 records from 274 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004154-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10426560
title: A dataset for testing  a single-cell Hi-C softwares
DOI: 10.5281/zenodo.17158498
title: A dataset for testing  a single-cell Hi-C softwares
DOI: 10.15468/dl.ba4hfe
title: Occurrence Download

description: A dataset containing 5814 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((11.99739 -2.06968,11.98398 -2.1684,12.05345 -2.24031,12.06686 -2.30369,12.30575 -2.28663,12.42154 -2.24641,12.42032 -2.14768,12.39595 -2.05383,12.35329 -1.97217,12.3216 -1.95876,12.22287 -1.94657,12.15584 -1.95267,12.04127 -2.00264,12.0047 -2.02824,11.99739 -2.06968))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 5814 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004153-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9966dy
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psephotus haematonotus",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 38 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004155-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13131644
title: Egypt Gold Prices | Daily Updated
DOI: 10.15468/dl.bpkfdt
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Psephotus haematonotus",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004156-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60893/figshare.apl.30031300
title: Supplement Information1 of clean version

description: Supplementary information containing additional experimental data, XRD patterns, transport property measurements, and detailed characterization results supporting the main text