cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.5nutc6
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Romania",
 "TaxonKey is Iris aphylla"
 ]
}

 The dataset includes 81 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002626-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s4g658
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Where are all the whiptail rays? - Powered by Anecdata.org"
 ]
}

 The dataset includes 59 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002625-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc3g94z
title: CCDC 103110: Experimental Crystal Structure Determination

description: Related Article: M.Kondo, T.Okubo, A.Asami, S.Noro, T.Yoshitomi, S.Kitagawa, T.Ishii, H.Matsuzaka, K.Seki|1999|Angew.Chem.,Int.Ed.|38|140|doi:10.1002/(SICI)1521-3773(19990115)38:1/2<140::AID-ANIE140>3.0.CO;2-9
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8cdzz
title: CCDC 249301: Experimental Crystal Structure Determination

description: Related Article: Y.Kubota, M.Takata, R.Matsuda, R.Kitaura, S.Kitagawa, K.Kato, M.Sakata, T.C.Kobayashi|2005|Angew.Chem.,Int.Ed.|44|920|doi:10.1002/anie.200461895
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc8cf01
title: CCDC 249302: Experimental Crystal Structure Determination

description: Related Article: Y.Kubota, M.Takata, R.Matsuda, R.Kitaura, S.Kitagawa, K.Kato, M.Sakata, T.C.Kobayashi|2005|Angew.Chem.,Int.Ed.|44|920|doi:10.1002/anie.200461895
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.18195508
title: Update of the Xylella spp. host plant database

description: Following a request from the European Commission, in 2018 EFSA released a renovated database of host plant species of Xylella spp. (including both species X. fastidiosa and X. taiwanensis) together with a scientific report (EFSA, 2018). EFSA was tasked to maintain and update this database periodically. The mandate now covers the period 2021-2026 and EFSA is requested to release an update of the database twice per year.

In January 2026 EFSA released the twelfth update of the Xylella spp. host plant database (VERSION 13) with information retrieved from literature search up to June 2025 and recent Europhyt outbreak notifications (EFSA, 2025). The protocol applied for the extensive literature review, data collection and reporting, as well as results and lists of host plants are described in detail in the related scientific report (EFSA, 2025).

The overall number of Xylella spp. host plants determined with at least two different detection methods or positive with one method (between: sequencing, pure culture isolation) reaches now 464 plant species, 210 genera and 71 families (category A – see section 2.4.2 of EFSA (2025)). Such numbers rise to 728 plant species, 319 genera and 91 families if considered regardless of the detection method applied (category E, see section 2.4.2 of EFSA (2025)).

The Excel files here attached represent the VERSION 13 of the Xylella spp. host plants database. For a detailed description of the information included in the database, please consult the related scientific report (EFSA, 2025).

The Excel file “Xylella spp. host plants database – VERSION 13” contains several sheets: the LEGENDA (with extensive description of each table), the full detailed raw data of the Xylella spp. host plant database (sheet “observation”) and several examples of data extraction.

Additional Excel files contain the lists of host plant species of X. fastidiosa (subsp. unknown (i.e. not reported), fastidiosa, multiplex, pauca, morus, sandyi, tashke, fastidiosa/sandyi) and X. taiwanensis infected naturally, artificially and in not specified conditions, and according to different categories (A, B, C, D, E – see section 2.4.2 of EFSA (2025)). The Excel file “new_host_plant_species_v13” contain the list of new host plant species added to the database in this new update.

Question number: EFSA-Q-2025-00047

Output number: EN-9841

Contacts: plants@efsa.europa.eu

Bibliography:

EFSA (European Food Safety Authority). (2018). Scientific report on the update of the Xylella spp. host plant database. EFSA Journal 2018, 16(9), 5408, 87 pp. https://doi.org/10.2903/j.efsa.2018.5408

EFSA (European Food Safety Authority), Cavalieri, V., Fasanelli, E., Furnari, G., Gibin, D., Gutierrez Linares, A., La Notte, P., Pasinato, L., & Stancanelli, G. (2026). Update of the Xylella spp. host plant database – Systematic literature search up to 30 June 2025. EFSA Journal, 24(1), e9840. https://doi.org/10.2903/j.efsa.2026.9840
description: EU; xlsx; plants@efsa.europa.eu
DOI: 10.5281/zenodo.1339343
title: Update of the Xylella spp. host plant database

description: Following a request from the European Commission, in 2018 EFSA released a renovated database of host plant species of Xylella spp. (including both species X. fastidiosa and X. taiwanensis) together with a scientific report (EFSA, 2018). EFSA was tasked to maintain and update this database periodically. The mandate now covers the period 2021-2026 and EFSA is requested to release an update of the database twice per year.

In January 2026 EFSA released the twelfth update of the Xylella spp. host plant database (VERSION 13) with information retrieved from literature search up to June 2025 and recent Europhyt outbreak notifications (EFSA, 2025). The protocol applied for the extensive literature review, data collection and reporting, as well as results and lists of host plants are described in detail in the related scientific report (EFSA, 2025).

The overall number of Xylella spp. host plants determined with at least two different detection methods or positive with one method (between: sequencing, pure culture isolation) reaches now 464 plant species, 210 genera and 71 families (category A – see section 2.4.2 of EFSA (2025)). Such numbers rise to 728 plant species, 319 genera and 91 families if considered regardless of the detection method applied (category E, see section 2.4.2 of EFSA (2025)).

The Excel files here attached represent the VERSION 13 of the Xylella spp. host plants database. For a detailed description of the information included in the database, please consult the related scientific report (EFSA, 2025).

The Excel file “Xylella spp. host plants database – VERSION 13” contains several sheets: the LEGENDA (with extensive description of each table), the full detailed raw data of the Xylella spp. host plant database (sheet “observation”) and several examples of data extraction.

Additional Excel files contain the lists of host plant species of X. fastidiosa (subsp. unknown (i.e. not reported), fastidiosa, multiplex, pauca, morus, sandyi, tashke, fastidiosa/sandyi) and X. taiwanensis infected naturally, artificially and in not specified conditions, and according to different categories (A, B, C, D, E – see section 2.4.2 of EFSA (2025)). The Excel file “new_host_plant_species_v13” contain the list of new host plant species added to the database in this new update.

Question number: EFSA-Q-2025-00047

Output number: EN-9841

Contacts: plants@efsa.europa.eu

Bibliography:

EFSA (European Food Safety Authority). (2018). Scientific report on the update of the Xylella spp. host plant database. EFSA Journal 2018, 16(9), 5408, 87 pp. https://doi.org/10.2903/j.efsa.2018.5408

EFSA (European Food Safety Authority), Cavalieri, V., Fasanelli, E., Furnari, G., Gibin, D., Gutierrez Linares, A., La Notte, P., Pasinato, L., & Stancanelli, G. (2026). Update of the Xylella spp. host plant database – Systematic literature search up to 30 June 2025. EFSA Journal, 24(1), e9840. https://doi.org/10.2903/j.efsa.2026.9840
description: EU; xlsx; plants@efsa.europa.eu
DOI: 10.6084/m9.figshare.31113636
title: Probing the intermolecular interactions, binding affinity, charge density distribution of N-(3-chlorophenyl)-2-cyanoacetamide (NCPC) against Alzheimer’s disease: Insights of experimental and computational techniques

description: The increase in the findings of the novel methodologies has contributed to the development of the new compounds with enhanced properties. The exploration of the different properties experimentally is an expensive and resource-intensive procedure. Hence, the use of the computational tools to find and validate the various properties will help in the failures of the newly synthesized compounds with drug related properties. In this regard, we report the synthesis of N-(3-chlorophenyl)-2-cyanoacetamide (NCPC) compound and its investigation as therapeutic agent to target the Alzheimer’s disease (AD) with inhibitory potential evaluated against cholinesterase (ChE). The Hirshfeld Surface Analysis (HSA) revealed the various intra- and intermolecular interactions involved in the crystalline environment, and they are found to be in corroboration with the obtained X-ray diffraction (XRD) results. Further, to explore the role of non-covalent interactions toward the binding affinity of the compound Quantum Theory of Atoms In Molecule (QTAIM) analysis was employed. Natural bond orbital analysis was performed to examine the intramolecular hyperconjugations and charge delocalization in the molecule. <i>In silico</i> Structure Activity Relationship (SAR) study was carried out through molecular docking and its binding score is found to be −6.00 kcal/mol. Further, the molecular dynamics study revealed a good binding affinity between the protein and the ligand. Molecular dynamics simulations determined the stability and binding modes of the <b>NCPC</b> compound with the most inhibition efficiency for the reversible of the AD. According to our findings, the <b>NCPC</b> molecule offers useful templates to develop novel multipurpose drugs that can be used to treat AD.
DOI: 10.6084/m9.figshare.31113636.v1
title: Probing the intermolecular interactions, binding affinity, charge density distribution of N-(3-chlorophenyl)-2-cyanoacetamide (NCPC) against Alzheimer’s disease: Insights of experimental and computational techniques

description: The increase in the findings of the novel methodologies has contributed to the development of the new compounds with enhanced properties. The exploration of the different properties experimentally is an expensive and resource-intensive procedure. Hence, the use of the computational tools to find and validate the various properties will help in the failures of the newly synthesized compounds with drug related properties. In this regard, we report the synthesis of N-(3-chlorophenyl)-2-cyanoacetamide (NCPC) compound and its investigation as therapeutic agent to target the Alzheimer’s disease (AD) with inhibitory potential evaluated against cholinesterase (ChE). The Hirshfeld Surface Analysis (HSA) revealed the various intra- and intermolecular interactions involved in the crystalline environment, and they are found to be in corroboration with the obtained X-ray diffraction (XRD) results. Further, to explore the role of non-covalent interactions toward the binding affinity of the compound Quantum Theory of Atoms In Molecule (QTAIM) analysis was employed. Natural bond orbital analysis was performed to examine the intramolecular hyperconjugations and charge delocalization in the molecule. <i>In silico</i> Structure Activity Relationship (SAR) study was carried out through molecular docking and its binding score is found to be −6.00 kcal/mol. Further, the molecular dynamics study revealed a good binding affinity between the protein and the ligand. Molecular dynamics simulations determined the stability and binding modes of the <b>NCPC</b> compound with the most inhibition efficiency for the reversible of the AD. According to our findings, the <b>NCPC</b> molecule offers useful templates to develop novel multipurpose drugs that can be used to treat AD.
DOI: 10.5517/ccdc.csd.cc2n3rtc
title: CCDC 2446483: Experimental Crystal Structure Determination

description: Related Article: Ge Bangdi, Song Xiaowei, Liang Zhiqiang|2025|Wuji Huaxue Xuebao|41|2165|doi:10.11862/CJIC.20250190
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qq8b2
title: CCDC 2523844: Experimental Crystal Structure Determination

description: Related Article: xuanzhen han|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qq8k9
title: CCDC 2523851: Experimental Crystal Structure Determination

description: Related Article: xuanzhen han|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qq8wm
title: CCDC 2523861: Experimental Crystal Structure Determination

description: Related Article: xuwei li|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qq970
title: CCDC 2523872: Experimental Crystal Structure Determination

description: Related Article: Junpeng Guo|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qqb1v
title: CCDC 2523897: Experimental Crystal Structure Determination

description: Related Article: Jian-Yong jianyong1106|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qqfzw
title: CCDC 2524019: Experimental Crystal Structure Determination

description: Related Article: Tao Yang|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qqdwr
title: CCDC 2523985: Experimental Crystal Structure Determination

description: Related Article: Feng Jin|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qqkkl
title: CCDC 2524130: Experimental Crystal Structure Determination

description: Related Article: jiankun xue|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qqldg
title: CCDC 2524156: Experimental Crystal Structure Determination

description: Related Article: Łukasz Cieszyński, Anna Makal|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qqlfh
title: CCDC 2524157: Experimental Crystal Structure Determination

description: Related Article: Łukasz Cieszyński, Anna Makal|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qqr3b
title: CCDC 2524302: Experimental Crystal Structure Determination

description: Related Article: Dongsheng Fu|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.a7hf8u
title: Occurrence Download

description: A dataset containing 583043 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is Swiss National Fungi Databank",
 "OccurrenceStatus is Present",
 "PublishingOrg is 64ee55c9-570a-42af-b7da-3f13c6b4e5a9",
 "TaxonKey is Fungi",
 "Year 2000-2026"
 ]
}

 The dataset includes 583043 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002617-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2qqr8h
title: CCDC 2524307: Experimental Crystal Structure Determination

description: Related Article: Dongsheng Fu|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25345/c50r9mh91
title: MassIVE MSV000100538 - Stringent response second messenger, (p)ppGpp, maintains Streptococcus mutans virulence and its competitiveness with oral streptococci
title: The guanosine alarmone (p)ppGpp is a central regulator of bacterial stress responses and metabolism, yet its role in shaping ecological interactions within oral biofilms remains poorly understood. Streptococcus mutans and Streptococcus sanguinis are early colonizers of tooth surfaces that adopt contrasting ecological strategies and compete for dominance in dental biofilms. In this study, we examined how (p)ppGpp metabolism influences S. mutans virulence and competitiveness in single- and dual-species biofilms with commensal S. sanguinis . Using biofilm assays, CFU enumeration, confocal microscopy, and agar-based competition assays, we observed that high (p)ppGpp levels enhanced S. mutans competitiveness and suppression of S. sanguinis, whereas loss of (p)ppGpp abolished antagonistic activity. The inhibitory effect was sensitive to proteinase K treatment, indicating involvement of proteinaceous factors consistent with non-lantibiotic bacteriocins. Gene expression and proteomic analysis further revealed upregulation of bacteriocin-associated proteins, including BacA1, BacA2, and BacD, and genes, including nlmAB, mutV, and mutVI, under high (p)ppGpp conditions. These findings identify (p)ppGpp as a key regulatory node linking stress signaling to bacteriocin-mediated antagonism in S. mutans and suggest that environmental conditions promoting (p)ppGpp accumulation may favor cariogenic biofilm development, while interference with (p)ppGpp synthesis could offer a selective strategy to rebalance oral microbial communities and reduce caries risk.
DOI: 10.5517/ccdc.csd.cc2qqrx4
title: CCDC 2524327: Experimental Crystal Structure Determination

description: Related Article: Minghe Sun|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2qqslv
title: CCDC 2524348: Experimental Crystal Structure Determination

description: Related Article: Huidong Xie|2026|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.