cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7281/t1/myjbmq
title: Data associated with the publication: Enhanced molecular doping for high conductivity in polymers with volume freed for dopants

description: From the publication abstract: We present two new polythiophene isomers, PQTC16-TT and PQTSC16-TT, with more separation and lower side chain density on the backbone compared with the typical polythiophenes, such as PQT(S)12 and PBTTT(S)12. The introduction of spacer subunits to separate the side chains improves the accommodation of dopant molecules close to the polymer backbone. Therefore, the lamellar structure and π–π stacking of polymers were negligibly disturbed by dopants; in fact, improved ordering and closer π-stacking were observed after chemical doping. Furthermore, the doping efficiency is significantly enhanced and the electrical conductivity is improved up to 330 S cm–1, still maintained at 200 S cm–1 at higher doping concentration, for the combination of PQTSC16-TT/NOBF4. We investigate how charge transfer is affected by the geometry of the dopant with respect to the polymer repeat unit. It is shown that the sulfurs in the side chains act as binding sites for dopants, resulting in higher thermal and environmental stability of alkylthio-substituted polymers upon doping.
DOI: 10.13144/lil-1681
title: Recensement de la population : fichier détail migrations résidentielles des individus entre commune de résidence actuelle et pays de résidence antérieure - 2021

description: Le fichier détail du recensement de la population de 2021 "Migrations résidentielles des individus entre commune de résidence actuelle et pays de résidence antérieure" est de nouveau diffusé après quatre ans de suspension (entre 2009 et 2012) suite à un changement de questionnaire. Ce fichier détail fait désormais référence à la résidence antérieure des personnes recensées 1 an avant leur interrogation (contre 5 ans pour les recensements de la population 2006, 2007 et 2008).  Il porte sur la résidence actuelle et antérieure des individus, leurs principales caractéristiques sociodémographiques, ainsi que celles du ménage auquel ils appartiennent. A partir de ce fichier, il est donc possible de faire des analyses exploratoires de données, de modéliser des comportements, ou simplement de tabuler sur une sous-population particulière définie selon certains critères : appartenance à une zone géographique et/ou unité statistique présentant certaines caractéristiques.
DOI: 10.15468/dl.dw3kuc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cylindrocystis brebissonii (Menegh. ex Ralfs) de Bary",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -28.5786,20.509 -28.5786,20.509 -32.9007,25.5395 -32.9007,25.5395 -28.5786))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064848-250525065834625/datasets/export for details.
DOI: 10.13144/lil-1682
title: Recensement de la population : fichier détail migrations résidentielles des individus entre département de résidence actuelle et pays de résidence antérieure - 2021

description: Le fichier détail  du recensement de la population de 2020 "Migrations résidentielles des individus entre département de résidence actuelle et pays de résidence antérieure" est de nouveau diffusé après quatre ans de suspension (entre 2009 et 2012) suite à un changement de questionnaire. Ce fichier détail fait désormais référence à la résidence antérieure des personnes recensées 1 an avant leur interrogation (contre 5 ans pour les recensements de la population 2006, 2007 et 2008). Il porte sur la résidence actuelle et antérieure des individus, leurs principales caractéristiques sociodémographiques, ainsi que celles du ménage auquel ils appartiennent. Les variables y sont disponibles avec des modalités détaillées. A partir de ce fichier, il est donc possible de faire des analyses exploratoires de données, de modéliser des comportements, ou simplement de tabuler sur une sous-population particulière définie selon certains critères : appartenance à une zone géographique et/ou unité statistique présentant certaines caractéristiques.
DOI: 10.6084/m9.figshare.29381954
title: <b>Supplemental Figure S2. </b>No differences in plasma CETP, PLTP and PON1 activity between LAF and HAF groups. <i>n</i> = 58-60/group.<b> </b>CETP, cholesteryl ester transfer protein; PLTP, phospholipid transfer protein; PON1, serum paraoxonase 1; LAF, low aerobic fitness; HAF, high aerobic fitness.

description: No differences in plasma CETP, PLTP and PON1 activity between LAF and HAF groups. <i>n</i> = 58-60/group. CETP, cholesteryl ester transfer protein; PLTP, phospholipid transfer protein; PON1, serum paraoxonase 1; LAF, low aerobic fitness; HAF, high aerobic fitness.
DOI: 10.6084/m9.figshare.29381954.v2
title: <b>Supplemental Figure S2. </b>No differences in plasma CETP, PLTP and PON1 activity between LAF and HAF groups. <i>n</i> = 58-60/group.<b> </b>CETP, cholesteryl ester transfer protein; PLTP, phospholipid transfer protein; PON1, serum paraoxonase 1; LAF, low aerobic fitness; HAF, high aerobic fitness.

description: No differences in plasma CETP, PLTP and PON1 activity between LAF and HAF groups. <i>n</i> = 58-60/group. CETP, cholesteryl ester transfer protein; PLTP, phospholipid transfer protein; PON1, serum paraoxonase 1; LAF, low aerobic fitness; HAF, high aerobic fitness.
DOI: 10.6084/m9.figshare.29381954.v1
title: <b>Supplemental figure S2. </b>No differences in plasma CETP, PLTP and PON1 activity between LAF and HAF groups. <i>n</i> = 58-60/group.<b> </b>CETP, cholesteryl ester transfer protein; PLTP, phospholipid transfer protein; PON1, serum paraoxonase 1; LAF, low aerobic fitness; HAF, high aerobic fitness.

description: No differences in plasma CETP, PLTP and PON1 activity between LAF and HAF groups. <i>n</i> = 58-60/group. CETP, cholesteryl ester transfer protein; PLTP, phospholipid transfer protein; PON1, serum paraoxonase 1; LAF, low aerobic fitness; HAF, high aerobic fitness.
DOI: 10.15468/dl.m2vnzb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cylindrocystis brebissonii (Menegh. ex Ralfs) de Bary",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.7576 -24.3688,20.529 -24.0715,20.509 -24.0715,20.509 -28.5786,25.5395 -28.5786,25.5395 -24.0715,25.1306 -24.0715,24.9333 -24.4571,23.8962 -24.2467,22.8065 -24.295,22.3719 -24.7207,22.2323 -25.547,22.0387 -25.7188,21.7833 -25.7784,21.5388 -25.7113,21.3553 -25.5415,20.7576 -24.3688))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064849-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.15488419
title: Assessing the effectiveness of nature-based solutions and building-level flood risk reduction measures
DOI: 10.5281/zenodo.15488420
title: Assessing the effectiveness of nature-based solutions and building-level flood risk reduction measures
DOI: 10.5281/zenodo.15689424
title: Code and Data for the manuscript "Community conservatism is widespread  throughout microbial phyla and environments"

description:  


This repository (community_conservatism-main.zip) contains the custom scripts used in the Manuscript "Community conservatism is widespread throughout microbial phyla and environments".

The following packages and programs are needed:



MAPseq v.2.2.1 
fastTree  2.1.10
HPC-CLUST v1.1.0 
FlashWeave v.0.19.0 
Python 3.7.6
Python libraries:
    numpy 1.18.1
    Pandas 1.0.3
    bokeh 2.2.3
    ete3 3.1.2
    holoviews 0.11.6
    scipy 1.4.1
    WordCloud 1.5.0  


 


For the workflow, we here show the general trend containing all fully annotated microbes (Bacteria&Archaea). The workflow was then repeated seperately for each shown envionment (animal, marine, freshwater plant and soil) as well as for all phyla which contain >500 99% OTUs.

First, phylogenetic trees are contructed with the "make_all_trees" ipyndb workbook. These trees are converted into a pairwise tree branch length matrix, which is then used to select OTU-pairs following a uniform distribution. This is reproducible via the "select_taxa" script, where the distances are used to obtain bins and fill them with different OTU-pairs, as well as save the respective files. The OTU-pairs are then used to compute the ß-similarity values of all sample-sample comparisons off the two OTUs, as well as additional metrics such as sequence similarity, main evironment etc. (See Methods of Paper)

All of these are combined into one file, which is then further processed to plot most results.

The file "microbes_result_combined.csv" contains the main results of the general microbial trend needed to reproduce the main result figures. Follow the scipt "main_figure_plots" to obtain said plots, and experiment using different percentiles etc.All raw data (OTU-tables in hdf5 format) is found in otu99.h5.gz and otu90.h5.gz for the read couts of 99% OTUs and 90% OTUs, respectively. The "open_h5_file.ipynb" file contains the function to open said file.otu.99.tree is the phylogenetic tree, from which we calculated the tree branch lengths ("Phylogenetic Distance") between OTU-pairs.Additionally, we provide the two matrices for the example taxonomy off A90_104- "combined" for the combined clustering (sequence similarity combined with community similarity, see Methods for formula) and "seq_dissimilarity", which contains the pariwise values of: "2 - sequence similarity" of the 16S rRNA of all OTU-pairs therein.
DOI: 10.15468/dl.b82frw
title: Occurrence Download

description: A dataset containing 730 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "TaxonKey is Engelhardia Lesch. ex Blume"
 ]
}

 The dataset includes 730 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064852-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wfyzmf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cylindrocystis brebissonii (Menegh. ex Ralfs) de Bary",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.529 -24.0715,20.509 -24.0455,20.509 -24.0715,20.529 -24.0715))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064853-250525065834625/datasets/export for details.
DOI: 10.15468/dl.tmuqs9
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Eragrostis obtusa Munro ex Ficalho & Hiern",
 "Geometry POLYGON((29.76451 -26.09643, 32.1599 -26.09643, 32.1599 -22.51877, 29.76451 -22.51877, 29.76451 -26.09643))"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064854-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9pb8x9
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Eragrostis rigidior Pilg.",
 "Geometry POLYGON((29.76451 -26.09643, 32.1599 -26.09643, 32.1599 -22.51877, 29.76451 -22.51877, 29.76451 -26.09643))"
 ]
}

 The dataset includes 65 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064855-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15720451
title: Supplementary data accompanying Ruthig, Edler v.d. Planitz et al (2025)

description: S1_Data: Powerpoint file containing all images part of Figure 1.

S2_Data: Zip file containing all images and the necessary script to reproduce Figure 2.

S3_Data: Zip file containing included measurements from CC and SWM (SWM: both orthogonal/parallel cut data) in separate .csv files. This data is the basis for Figures 3, 4, and Figures S7-S12.

S4_Data: Zip file containing validation data for SWM. Necessary to reproduce Fig. S2, S4, S5, S6.

S5_Data: Zip file containing validation data for CC. Necessary to reproduce Fig. S1, S3, S5, S6.
DOI: 10.5281/zenodo.15720452
title: Supplementary data accompanying Ruthig, Edler v.d. Planitz et al (2025)

description: S1_Data: Powerpoint file containing all images part of Figure 1.

S2_Data: Zip file containing all images and the necessary script to reproduce Figure 2.

S3_Data: Zip file containing included measurements from CC and SWM (SWM: both orthogonal/parallel cut data) in separate .csv files. This data is the basis for Figures 3, 4, and Figures S7-S12.

S4_Data: Zip file containing validation data for SWM. Necessary to reproduce Fig. S2, S4, S5, S6.

S5_Data: Zip file containing validation data for CC. Necessary to reproduce Fig. S1, S3, S5, S6.
DOI: 10.15468/dl.hc5ph5
title: Occurrence Download

description: A dataset containing 186 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Eragrostis superba Peyr.",
 "Geometry POLYGON((29.76451 -26.09643, 32.1599 -26.09643, 32.1599 -22.51877, 29.76451 -22.51877, 29.76451 -26.09643))"
 ]
}

 The dataset includes 186 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064856-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12256321
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.fa3had
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cylindrocystis brebissonii (Menegh. ex Ralfs) de Bary",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -23.2724,25.1306 -24.0715,25.5395 -24.0715,25.5395 -23.2724))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064857-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.29381975
title: <b>Supplemental Table S8.</b> Associations of aerobic fitness level (a) and body fat percentage (b) with HDL major lipid class proportions and their ratios. All models were adjusted for lean mass (kg).

description: Associations of aerobic fitness level (a) and body fat percentage (b) with HDL major lipid class proportions and their ratios. All models were adjusted for lean mass (kg).
DOI: 10.6084/m9.figshare.29381975.v1
title: <b>Supplemental Table S8.</b> Associations of aerobic fitness level (a) and body fat percentage (b) with HDL major lipid class proportions and their ratios. All models were adjusted for lean mass (kg).

description: Associations of aerobic fitness level (a) and body fat percentage (b) with HDL major lipid class proportions and their ratios. All models were adjusted for lean mass (kg).
DOI: 10.6084/m9.figshare.29381900
title: Section 4.1. The Pan European network

description: The file contains all (36, T, 8424)-MPs for all attainable transmission times T ∈ [46; 197] \ {194, 196} determined by my dictionary (d, T, b)-MPs algorithm for the solution of the generalized quickest path reliability problem in the Pan European network with parameters described in Section 4.1
DOI: 10.6084/m9.figshare.29381900.v1
title: Section 4.1. The Pan European network

description: The file contains all (36, T, 8424)-MPs for all attainable transmission times T ∈ [46; 197] \ {194, 196} determined by my dictionary (d, T, b)-MPs algorithm for the solution of the generalized quickest path reliability problem in the Pan European network with parameters described in Section 4.1
DOI: 10.15468/dl.dazbpp
title: Occurrence Download

description: A dataset containing 462 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is New Caledonia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Melaleuca quinquenervia (Cav.) S.T.Blake"
 ]
}

 The dataset includes 462 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064858-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4d77ef
title: Occurrence Download

description: A dataset containing 489 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hibiscus radiatus Cav."
 ]
}

 The dataset includes 489 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064859-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8wad9x
title: Occurrence Download

description: A dataset containing 489 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hibiscus radiatus Cav."
 ]
}

 The dataset includes 489 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064861-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.79rbf8
title: Occurrence Download

description: A dataset containing 4590 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry MULTIPOLYGON(((144.40237 -37.63968,144.40135 -37.64592,144.40281 -37.64661,144.40068 -37.64932,144.40368 -37.65258,144.4104 -37.65491,144.40683 -37.65803,144.40978 -37.65982,144.40646 -37.66109,144.4159 -37.67047,144.41327 -37.6731,144.41477 -37.67509,144.41243 -37.67768,144.41764 -37.68047,144.41623 -37.68809,144.41955 -37.68725,144.41873 -37.69221,144.4237 -37.69272,144.42224 -37.70132,144.43541 -37.70276,144.4366 -37.69574,144.44842 -37.69682,144.45786 -37.70545,144.47131 -37.70695,144.48941 -37.71319,144.47768 -37.78101,144.53268 -37.78727,144.5488 -37.79714,144.56758 -37.79889,144.57756 -37.80414,144.57741 -37.80691,144.58243 -37.80115,144.57819 -37.7994,144.58453 -37.79467,144.58829 -37.79427,144.59086 -37.7892,144.58785 -37.78686,144.59048 -37.78447,144.58914 -37.78162,144.58396 -37.77895,144.58301 -37.77564,144.57955 -37.77323,144.57817 -37.77013,144.57998 -37.76469,144.57922 -37.76146,144.58232 -37.75815,144.57624 -37.75355,144.57689 -37.75026,144.57522 -37.74816,144.61227 -37.75167,144.62451 -37.68228,144.6349 -37.68334,144.63912 -37.68019,144.6382 -37.67838,144.64012 -37.67927,144.64333 -37.67798,144.64318 -37.67566,144.64155 -37.67508,144.64295 -37.67243,144.64689 -37.6713,144.6443 -37.66821,144.64593 -37.66697,144.64488 -37.66246,144.64784 -37.65924,144.64351 -37.65426,144.6437 -37.65259,144.60857 -37.64838,144.60824 -37.65071,144.61357 -37.65474,144.61232 -37.65641,144.5565 -37.64928,144.55513 -37.6428,144.53801 -37.64064,144.53884 -37.63849,144.53766 -37.63742,144.51945 -37.63526,144.52011 -37.6322,144.50499 -37.63025,144.50148 -37.63263,144.4898 -37.63386,144.48449 -37.63153,144.46744 -37.6292,144.46368 -37.63446,144.45583 -37.62321,144.43085 -37.62095,144.42876 -37.61638,144.42019 -37.61225,144.38482 -37.60672,144.38985 -37.61102,144.38878 -37.61109,144.38967 -37.61331,144.3934 -37.61601,144.39364 -37.61808,144.39599 -37.61857,144.39476 -37.62201,144.39608 -37.62278,144.39415 -37.62372,144.39598 -37.62703,144.39419 -37.62952,144.40171 -37.63645,144.40025 -37.63728,144.40237 -37.63968)))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (March, April, May, June, July, August, September, October)",
 "OccurrenceStatus is Present",
 "Year 2020-2020"
 ]
}

 The dataset includes 4590 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064862-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.68b3ek
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cylindrocystis brebissonii (Menegh. ex Ralfs) de Bary",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.2855 -34.7533,20.509 -34.5676,20.509 -32.9007,17.7723 -32.9007,17.8156 -33.0786,18.3471 -33.7176,18.3748 -33.8287,18.2181 -34.0492,18.3197 -34.3408,18.4452 -34.429,18.5435 -34.4213,18.5872 -34.3667,18.5363 -34.167,18.7345 -34.1508,18.7216 -34.3637,18.7808 -34.4521,19.0289 -34.4206,19.0831 -34.4835,19.2655 -34.5017,19.2032 -34.6157,19.2394 -34.6926,19.375 -34.6963,19.6091 -34.8524,19.8251 -34.8396,19.9798 -34.9064,20.1081 -34.8731,20.1517 -34.7847,20.2855 -34.7533))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064860-250525065834625/datasets/export for details.
DOI: 10.15468/dl.5uxv8q
title: Occurrence Download

description: A dataset listing the 6329 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "Country is New Zealand",
 "DatasetKey is one of (USDA United States National Fungus Collections, The New York Botanical Garden Herbarium (NY), Fungi (S), Royal Botanic Gardens, Kew - Fungarium Specimens, University of Michigan Herbarium, Lichen herbarium, Oslo (O) UiO, Botany (UPS), Meise Botanic Garden Herbarium (BR), Fungarium, Oslo (O) UiO, NMNH Extant Specimen Records (USNM, US), iNaturalist Research-grade Observations, Danish Mycological Society, fungal records database)",
 "OccurrenceStatus is Present",
 "TaxonKey is Fungi"
 ]
}

 The dataset's 6329 records were derived from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0064851-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.