cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7915840
title: Replication Package for ASE 2023 Paper "Personalized First Issue Recommender for Newcomers in Open Source Projects"

description: This replication package contains a replication package for ASE 2023 paper titled "Personalized First Issue Recommender for Newcomers in Open Source Projects." This package includes a dataset of 68,858 issues from 100 GitHub projects, records of 123 manually labeled issue samples, and Python scripts for analyzing the data and evaluating models. The package is also stored in the GitHub repository https://github.com/mcxwx123/PFIRec. Required Environment We recommend setting up the required environment on a commodity Linux machine with at least 1 CPU Core, 8GB Memory, and 100GB empty storage space. Our experiments were conducted on an Ubuntu 20.04 server with two Intel Xeon Gold CPUs, 320GB memory, and 36TB RAID 5 Storage. Files and Replicating Results We used the GFI-bot database and the GitHub GraphQL API to collect features of 68,858 candidate issues and restore historical states of resolvers of 11,615 FIs (first issues). The followings are the files and replicating results: Dataset: The raw data of newcomer-issue pairs' features are stored in <code>ReplicationPackage/data/dataset_{bertmodel}_{num}.pkl</code>, where {bertmodel} is one of the four BERT-based language models: SIMCSE, RoBERTa, CodeBERT, and BERTOverflow, corresponding to the dataset whose textual features are extracted by one of the four language models. And {num} is 0 to 19, corresponding to the 20 chronological folds. The training sets of the GFI-Bot approach are contained in <code>ReplicationPackage/data/training_set_recgfi_simcse_{num}.pkl</code>. <code>ReplicationPackage/data/newcomerdata.json</code> contains first issues' title and description and their resolvers' total commit number and number of commits in the latest month, and <code>ReplicationPackage/data/processeddata.pkl</code> contains the 37 developers' features for the empirical study. <code>ReplicationPackage/data/isstexts.json</code> contains issues titles and descriptions for Stanik et al.'s approach. Python scripts: <code>ReplicationPackage/empirical.py</code> is the script for reproducing all the results in Section III of the paper. <code>ReplicationPackage/model.py</code> is the script for reproducing all the results in Section IV of the paper. Records: <code>ReplicationPackage/PFIs.csv</code> records the manually labeled issues for the empirical study. Figures: By running <code>ReplicationPackage/empirical.py</code> and <code>ReplicationPackage/model.py</code>, you can get all the figures in the fold <code>ReplicationPackage/figures/</code>. Besides the figures in the paper, <code>ReplicationPackage/figures/</code> also contains <code>typedis_{num}.png</code>, and <code>domaindis_{num}.png</code>, {num} is 1 to 4, representing additional results of newcomer features for Figure 4 in the paper.
DOI: 10.5281/zenodo.7915841
title: Replication Package for ASE 2023 Paper "Personalized First Issue Recommender for Newcomers in Open Source Projects"

description: This replication package contains a replication package for ASE 2023 paper titled "Personalized First Issue Recommender for Newcomers in Open Source Projects." This package includes a dataset of 68,858 issues from 100 GitHub projects, records of 123 manually labeled issue samples, and Python scripts for analyzing the data and evaluating models. The package is also stored in the GitHub repository https://github.com/mcxwx123/PFIRec. Required Environment We recommend setting up the required environment on a commodity Linux machine with at least 1 CPU Core, 8GB Memory, and 100GB empty storage space. Our experiments were conducted on an Ubuntu 20.04 server with two Intel Xeon Gold CPUs, 320GB memory, and 36TB RAID 5 Storage. Files and Replicating Results We used the GFI-bot database and the GitHub GraphQL API to collect features of 68,858 candidate issues and restore historical states of resolvers of 11,615 FIs (first issues). The followings are the files and replicating results: Dataset: The raw data of newcomer-issue pairs' features are stored in <code>ReplicationPackage/data/dataset_{bertmodel}_{num}.pkl</code>, where {bertmodel} is one of the four BERT-based language models: SIMCSE, RoBERTa, CodeBERT, and BERTOverflow, corresponding to the dataset whose textual features are extracted by one of the four language models. And {num} is 0 to 19, corresponding to the 20 chronological folds. The training sets of the GFI-Bot approach are contained in <code>ReplicationPackage/data/training_set_recgfi_simcse_{num}.pkl</code>. <code>ReplicationPackage/data/newcomerdata.json</code> contains first issues' title and description and their resolvers' total commit number and number of commits in the latest month, and <code>ReplicationPackage/data/processeddata.pkl</code> contains the 37 developers' features for the empirical study. <code>ReplicationPackage/data/isstexts.json</code> contains issues titles and descriptions for Stanik et al.'s approach. Python scripts: <code>ReplicationPackage/empirical.py</code> is the script for reproducing all the results in Section III of the paper. <code>ReplicationPackage/model.py</code> is the script for reproducing all the results in Section IV of the paper. Records: <code>ReplicationPackage/PFIs.csv</code> records the manually labeled issues for the empirical study. Figures: By running <code>ReplicationPackage/empirical.py</code> and <code>ReplicationPackage/model.py</code>, you can get all the figures in the fold <code>ReplicationPackage/figures/</code>. Besides the figures in the paper, <code>ReplicationPackage/figures/</code> also contains <code>typedis_{num}.png</code>, and <code>domaindis_{num}.png</code>, {num} is 1 to 4, representing additional results of newcomer features for Figure 4 in the paper.
DOI: 10.6084/m9.figshare.23639526.v1
title: Enhancing reactivity of SiO<sup>+</sup> ions by controlled excitation to extreme rotational states

description: Reaction of SiO+ with H2
DOI: 10.6084/m9.figshare.23639526
title: Enhancing reactivity of SiO<sup>+</sup> ions by controlled excitation to extreme rotational states

description: Reaction of SiO+ with H2
DOI: 10.6084/m9.figshare.23741702
title: Physician perceptions and knowledge about limiting life support

description: Abstract This qualitative, descriptive study identified perceptions and knowledge of intensive care unit physicians about limiting life support. Results revealed different understandings and reasons for limiting life support: shared and isolated decision-making; obstacles such as family, professionals, legal issues and unpredictability of death; and specific case reports with benefits, dilemmas, and specificities by clinical picture and age group. Physicians agree on the need to limit life support but lack training on the topic and differences in understanding remain. The multiple reasons for its use and difficulties in decision-making and definition of conduct are permeated by ethical, cultural and personal conflicts, demonstrating the need for better education on the theme at different levels of health professional training.
DOI: 10.6084/m9.figshare.23741702.v1
title: Physician perceptions and knowledge about limiting life support

description: Abstract This qualitative, descriptive study identified perceptions and knowledge of intensive care unit physicians about limiting life support. Results revealed different understandings and reasons for limiting life support: shared and isolated decision-making; obstacles such as family, professionals, legal issues and unpredictability of death; and specific case reports with benefits, dilemmas, and specificities by clinical picture and age group. Physicians agree on the need to limit life support but lack training on the topic and differences in understanding remain. The multiple reasons for its use and difficulties in decision-making and definition of conduct are permeated by ethical, cultural and personal conflicts, demonstrating the need for better education on the theme at different levels of health professional training.
DOI: 10.6084/m9.figshare.23741708
title: Opportunism and the Role of Financial Incentives: An Experimental Analysis Based on Game Theory

description: ABSTRACT In this study, we measured how people would take advantage of others’ misinformation, when the financial incentive size changes in economic games. We conducted a laboratory experiment based on game theory, using a modified version of the ultimatum game, where proposers had the opportunity to manipulate the responder’s beliefs by the use of ‘hide behind the small cake’ strategy. Our results contradict the selfish rationality model predictions. Intermediary financial incentives led people to adopt extremes strategies of pure fair/selfish allocation. Greater levels of financial incentive reduced the full expropriation strategy and at the same time, reduced the presence of fair offers, which suggests an interesting interaction between opportunism and psychological costs of lying. The results showed that opportunism is hugely context-dependent and people will update their decision regarding opportunism in accordance with the financial size incentive. Thus, the same person can behave differently depending on the financial value involved and will not necessarily be more selfish when the financial amount increases.
DOI: 10.6084/m9.figshare.23741708.v1
title: Opportunism and the Role of Financial Incentives: An Experimental Analysis Based on Game Theory

description: ABSTRACT In this study, we measured how people would take advantage of others’ misinformation, when the financial incentive size changes in economic games. We conducted a laboratory experiment based on game theory, using a modified version of the ultimatum game, where proposers had the opportunity to manipulate the responder’s beliefs by the use of ‘hide behind the small cake’ strategy. Our results contradict the selfish rationality model predictions. Intermediary financial incentives led people to adopt extremes strategies of pure fair/selfish allocation. Greater levels of financial incentive reduced the full expropriation strategy and at the same time, reduced the presence of fair offers, which suggests an interesting interaction between opportunism and psychological costs of lying. The results showed that opportunism is hugely context-dependent and people will update their decision regarding opportunism in accordance with the financial size incentive. Thus, the same person can behave differently depending on the financial value involved and will not necessarily be more selfish when the financial amount increases.
DOI: 10.6084/m9.figshare.23741717
title: THE IMPACT OF AGILE TRANSFORMATION IN ORGANIZATIONAL CULTURE: FROM ORGANIZATIONAL PRACTICES AND VALUES TO CHANGE MANAGEMENT

description: Abstract Agile transformation, as it’s called in companies that have adopted the new work practice at some organizational level, is being applied by companies that intend to review their own values present in the organizational culture, and as a new way to build and maintain their products. This article aimed to identify the practices and values of organizational culture and change management can assist in cultural transformation with the adoption of agile methods. An online questionnaire was applied (322 respondents) and 7 interviews were conducted with professionals who are undergoing organizational change with the adoption of agile methods. The data were analyzed using statistical and content analysis. Greater egalitarianism was observed at different levels, autonomy for professionals, concern with collective work, among others. it was found the main motivations in search of process improvements, accelerate software delivery, improve IT and business alignment, increase productivity. Improvements in the adoption of agile methods included innovation, user satisfaction, quality, business value, processes and productivity. The adoption of agile methods affects the organizational culture with agile principles and values, generating positive impacts for people and the capacity for innovation in companies.
DOI: 10.6084/m9.figshare.23741717.v1
title: THE IMPACT OF AGILE TRANSFORMATION IN ORGANIZATIONAL CULTURE: FROM ORGANIZATIONAL PRACTICES AND VALUES TO CHANGE MANAGEMENT

description: Abstract Agile transformation, as it’s called in companies that have adopted the new work practice at some organizational level, is being applied by companies that intend to review their own values present in the organizational culture, and as a new way to build and maintain their products. This article aimed to identify the practices and values of organizational culture and change management can assist in cultural transformation with the adoption of agile methods. An online questionnaire was applied (322 respondents) and 7 interviews were conducted with professionals who are undergoing organizational change with the adoption of agile methods. The data were analyzed using statistical and content analysis. Greater egalitarianism was observed at different levels, autonomy for professionals, concern with collective work, among others. it was found the main motivations in search of process improvements, accelerate software delivery, improve IT and business alignment, increase productivity. Improvements in the adoption of agile methods included innovation, user satisfaction, quality, business value, processes and productivity. The adoption of agile methods affects the organizational culture with agile principles and values, generating positive impacts for people and the capacity for innovation in companies.
DOI: 10.5281/zenodo.8181257
title: Global long period earthquake catalog

description: This file contains information about long period earthquakes recorded in between 2010 and end of 2022
DOI: 10.5281/zenodo.8181256
title: Global long period earthquake catalog

description: This file contains information about long period earthquakes recorded in between 2010 and end of 2022
DOI: 10.6084/m9.figshare.23701970
title: Ductus venosus as a marker of fetal growth in first trimester in a population of Colombian pregnant women

description: Abstract Objectives: to evaluate the relationship between the ductus venosus (DV) and the variables of fetal growth in the first trimester in a Colombian pregnant population. Methods: a descriptive cross-sectional study was carried out with secondary data obtained from a multicenter study.526 patients were included between weeks 11 and 14 for gestational ultrasound follow-up attended in three health care institutions in Bogotá, Colombia, between May 2014 and October 2018. A bivariate descriptive analysis was carried out where the relationship between the characteristics of the DV in the first trimester and ultrasound findings. Results: the flow wave of the DV in the first trimester was normal in the entire sample, with a pulsatility index of the ductus venosus (DVPI) of 0.96±0.18. In addition, a negative correlation was found between the crown-rump length (CRL) and the DVPI (p&lt;0.05). Conclusion: there is a relationship between the DVPI regarding the CRL, indicating an interest in this early marker in relation to fetal growth alterations; however, more studies are required to determine the usefulness of this variable with respect to fetal growth.
DOI: 10.6084/m9.figshare.23701970.v1
title: Ductus venosus as a marker of fetal growth in first trimester in a population of Colombian pregnant women

description: Abstract Objectives: to evaluate the relationship between the ductus venosus (DV) and the variables of fetal growth in the first trimester in a Colombian pregnant population. Methods: a descriptive cross-sectional study was carried out with secondary data obtained from a multicenter study.526 patients were included between weeks 11 and 14 for gestational ultrasound follow-up attended in three health care institutions in Bogotá, Colombia, between May 2014 and October 2018. A bivariate descriptive analysis was carried out where the relationship between the characteristics of the DV in the first trimester and ultrasound findings. Results: the flow wave of the DV in the first trimester was normal in the entire sample, with a pulsatility index of the ductus venosus (DVPI) of 0.96±0.18. In addition, a negative correlation was found between the crown-rump length (CRL) and the DVPI (p&lt;0.05). Conclusion: there is a relationship between the DVPI regarding the CRL, indicating an interest in this early marker in relation to fetal growth alterations; however, more studies are required to determine the usefulness of this variable with respect to fetal growth.
DOI: 10.6084/m9.figshare.23741778
title: Curcuma_align.fasta

description: We provide the alignment matrix of Curcuma alismatifolia plastomes from several cultivars.
DOI: 10.6084/m9.figshare.23741778.v1
title: Curcuma_align.fasta

description: We provide the alignment matrix of Curcuma alismatifolia plastomes from several cultivars.
DOI: 10.6084/m9.figshare.20970089
title: The Predictive Value of CHA2DS2-VASc Score on Residual Syntax Score in Patients With ST Segment Elevation Myocardial Infarction

description: Abstract Background The CHA2DS2-VASc score is associated with adverse clinical outcomes in patients with cardiovascular disease. The residual Syntax score (rSS) is a scoring tool which has prognostic value in patients with ST segment elevation myocardial infarction (STEMI). Objectives Our aim in this study is to investigate the predictive value of the CHA2DS2-VASc score on rSS in STEMI patients. Methods A total of 688 consecutive patients with STEMI undergoing percutaneous coronary intervention were evaluated. Baseline demographic and clinical variables besides the CHA2DS2-VASc score were assessed. The patients were divided into two groups; patients with rSS of 8 or below as group 1 (509 patients) and more than 8 as group 2 (179 patients). A p-value &lt; 0.05 was considered statistically significant. Results The CHA2DS2-VASc score was higher in group 2 [1 (0-2); 1 (1-3), p&lt;0.001] compared to group 1. The incidence of hypertension [151 (29.7%); 73 (40.8%), p=0.006], patients ≥75 years [18 (3.5%); 21 (11.7%), p&lt;0.001], diabetes mellitus [85 (16.7%); 50 (27.9%), p=0.001] and vascular disease [12 (2.4%); 11 (6.1%), p=0.029] were higher in group 2. In multivariate logistic regression analysis, the CHA2DS2-VASc score (OR=1.355; 95%CI=1.171-1.568; p&lt;0.001), age ≥75 years [OR=3.218; 95%CI=1.645-6.295; p=0.001] and diabetes mellitus [OR=1.670; 95%CI=1.091-2.557; p=0.018] were independent predictors of high rSS. The receiver-operating characteristic curve analysis demonstrated that the CHA2DS2-VASc score had good predictive value for high rSS with a cut-off value of 1.5 (area under curve (AUC): 0.611, 95% confidence interval (CI):0.562-0.659, p&lt;0.001). Conclusions The CHA2DS2-VASc score has a predictive value on rSS in patients with STEMI. The CHA2DS2-VASc score was also an independent predictor of higher rSS.
DOI: 10.6084/m9.figshare.20970089.v1
title: The Predictive Value of CHA2DS2-VASc Score on Residual Syntax Score in Patients With ST Segment Elevation Myocardial Infarction

description: Abstract Background The CHA2DS2-VASc score is associated with adverse clinical outcomes in patients with cardiovascular disease. The residual Syntax score (rSS) is a scoring tool which has prognostic value in patients with ST segment elevation myocardial infarction (STEMI). Objectives Our aim in this study is to investigate the predictive value of the CHA2DS2-VASc score on rSS in STEMI patients. Methods A total of 688 consecutive patients with STEMI undergoing percutaneous coronary intervention were evaluated. Baseline demographic and clinical variables besides the CHA2DS2-VASc score were assessed. The patients were divided into two groups; patients with rSS of 8 or below as group 1 (509 patients) and more than 8 as group 2 (179 patients). A p-value &lt; 0.05 was considered statistically significant. Results The CHA2DS2-VASc score was higher in group 2 [1 (0-2); 1 (1-3), p&lt;0.001] compared to group 1. The incidence of hypertension [151 (29.7%); 73 (40.8%), p=0.006], patients ≥75 years [18 (3.5%); 21 (11.7%), p&lt;0.001], diabetes mellitus [85 (16.7%); 50 (27.9%), p=0.001] and vascular disease [12 (2.4%); 11 (6.1%), p=0.029] were higher in group 2. In multivariate logistic regression analysis, the CHA2DS2-VASc score (OR=1.355; 95%CI=1.171-1.568; p&lt;0.001), age ≥75 years [OR=3.218; 95%CI=1.645-6.295; p=0.001] and diabetes mellitus [OR=1.670; 95%CI=1.091-2.557; p=0.018] were independent predictors of high rSS. The receiver-operating characteristic curve analysis demonstrated that the CHA2DS2-VASc score had good predictive value for high rSS with a cut-off value of 1.5 (area under curve (AUC): 0.611, 95% confidence interval (CI):0.562-0.659, p&lt;0.001). Conclusions The CHA2DS2-VASc score has a predictive value on rSS in patients with STEMI. The CHA2DS2-VASc score was also an independent predictor of higher rSS.
DOI: 10.6084/m9.figshare.23741876
title: An overview on studies of species complexes in Solanaceae

description: Abstract Solanaceae comprises many species complexes, taxonomically challenging lineages that require specialized effort to be reliably delimited, and thus develop a reasoned hypothesis at the species level. To obtain an overview of aspects that permeate species complexes studies in Solanaceae, we collected and summarized details of selected works, resulting in 83 published articles comprising nine genera. Solanum, the most studied genus, spans all explored biogeographic realms, characterized by taxonomic complexity related to its long history of domestication. Capsicum is a unique case due to the adoption of complexes as an indicator of gene pool, while Petunia can potentially serve as a model for the use of species complexes to improve evolutionary knowledge given their phylogeographic studies. The Neotropical region concentrates the majority of research and presents the highest number of genera studied. Morphometrics is the main applied approach probably due to its low cost, followed by population genetics, reproductive biology, phylogeny, and others. Most studies do not present taxonomic decisions or apply integrated methods. We encourage studies with some neglected genera that may have hidden species complexes; a major effort to resolve the Solanum nigrum complex; and the use of effective, less applied fields of study such as ecology and palynology.
DOI: 10.6084/m9.figshare.23741876.v1
title: An overview on studies of species complexes in Solanaceae

description: Abstract Solanaceae comprises many species complexes, taxonomically challenging lineages that require specialized effort to be reliably delimited, and thus develop a reasoned hypothesis at the species level. To obtain an overview of aspects that permeate species complexes studies in Solanaceae, we collected and summarized details of selected works, resulting in 83 published articles comprising nine genera. Solanum, the most studied genus, spans all explored biogeographic realms, characterized by taxonomic complexity related to its long history of domestication. Capsicum is a unique case due to the adoption of complexes as an indicator of gene pool, while Petunia can potentially serve as a model for the use of species complexes to improve evolutionary knowledge given their phylogeographic studies. The Neotropical region concentrates the majority of research and presents the highest number of genera studied. Morphometrics is the main applied approach probably due to its low cost, followed by population genetics, reproductive biology, phylogeny, and others. Most studies do not present taxonomic decisions or apply integrated methods. We encourage studies with some neglected genera that may have hidden species complexes; a major effort to resolve the Solanum nigrum complex; and the use of effective, less applied fields of study such as ecology and palynology.