cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26132999
title: Family expectations and demand for home-based videogaming therapy in children with cerebral palsy in Costa Rica: a mixed methods study

description: To understand the expectations and demand for a movement-tracking videogame (Bootle Blast) for home-based, upper limb (UL) rehabilitation among Costa Rican children with cerebral palsy (CP). Data were collected via telephone screening (<i>demand</i>) and child-parent dyads Zoom interviews (<i>expectations</i>). Descriptive statistics and data transformation were used to report on <i>demand</i> success criteria (i.e., recruitment rate, having an appropriate screen and space to play, setting a weekly play time goal (PTG) ≥45 min, identifying one UL therapy goal). The DEPICT model for collaborative qualitative analysis was used in the thematic analysis of interview data. Fifteen dyads participated (1.6 ± 1 recruited/month). All had a flat-screen TV in a suitable location to play, were able to set a UL therapy goal, and established PTGs ranging from 45–120 min per week. Identified themes were: 1) Socio-cultural factors heighten demand, 2) Feelings of hope prevail for the intervention, and 3) Collaborative goal setting supports realistic expectations for Bootle Blast. Dyads had positive and realistic expectations about implementing the proposed videogaming intervention. This study provides insights on tailoring a family-centered, therapy gaming intervention to improve access to motor rehabilitation for children with CP in rural/remote settings and low-middle income countries. Costa Rican children have limited access to upper limb rehabilitation due to a combination of economic barriers, societal factors and the family context.Costa Rican children with cerebral palsy and their families expected home-based therapy gaming to be adaptable to their routines and aligned with their interests.Families perceived therapy gaming interventions as a promising path to access, participation, and enjoyment of at home upper limb motor therapy. Costa Rican children have limited access to upper limb rehabilitation due to a combination of economic barriers, societal factors and the family context. Costa Rican children with cerebral palsy and their families expected home-based therapy gaming to be adaptable to their routines and aligned with their interests. Families perceived therapy gaming interventions as a promising path to access, participation, and enjoyment of at home upper limb motor therapy.
DOI: 10.6084/m9.figshare.26132999.v1
title: Family expectations and demand for home-based videogaming therapy in children with cerebral palsy in Costa Rica: a mixed methods study

description: To understand the expectations and demand for a movement-tracking videogame (Bootle Blast) for home-based, upper limb (UL) rehabilitation among Costa Rican children with cerebral palsy (CP). Data were collected via telephone screening (<i>demand</i>) and child-parent dyads Zoom interviews (<i>expectations</i>). Descriptive statistics and data transformation were used to report on <i>demand</i> success criteria (i.e., recruitment rate, having an appropriate screen and space to play, setting a weekly play time goal (PTG) ≥45 min, identifying one UL therapy goal). The DEPICT model for collaborative qualitative analysis was used in the thematic analysis of interview data. Fifteen dyads participated (1.6 ± 1 recruited/month). All had a flat-screen TV in a suitable location to play, were able to set a UL therapy goal, and established PTGs ranging from 45–120 min per week. Identified themes were: 1) Socio-cultural factors heighten demand, 2) Feelings of hope prevail for the intervention, and 3) Collaborative goal setting supports realistic expectations for Bootle Blast. Dyads had positive and realistic expectations about implementing the proposed videogaming intervention. This study provides insights on tailoring a family-centered, therapy gaming intervention to improve access to motor rehabilitation for children with CP in rural/remote settings and low-middle income countries. Costa Rican children have limited access to upper limb rehabilitation due to a combination of economic barriers, societal factors and the family context.Costa Rican children with cerebral palsy and their families expected home-based therapy gaming to be adaptable to their routines and aligned with their interests.Families perceived therapy gaming interventions as a promising path to access, participation, and enjoyment of at home upper limb motor therapy. Costa Rican children have limited access to upper limb rehabilitation due to a combination of economic barriers, societal factors and the family context. Costa Rican children with cerebral palsy and their families expected home-based therapy gaming to be adaptable to their routines and aligned with their interests. Families perceived therapy gaming interventions as a promising path to access, participation, and enjoyment of at home upper limb motor therapy.
DOI: 10.6084/m9.figshare.25997591
title: Exercise and mind-body exercise for feeding and eating disorders: a systematic review with meta-analysis and meta-regressions

description: To develop a systematic review with meta-analysis to summarize the effectiveness of exercise, regular physical activity, and mind-body exercise on harmful exercise habits, psychological factors, and quality of life in people clinically diagnosed with feeding and eating disorders. Randomized clinical trials and pilot randomized clinical trials were considered. Twelve studies were included. No studies evaluated athletes. No studies examined regular physical activity as the targeted intervention. Quality of life could not be meta-analyzed. Overall, meta-analyses showed that exercise or mind-body exercise was not more effective than controls in reducing depression symptoms, harmful exercise habits, eating behaviors, or emotional regulation skills. However, important methodological and clinical issues were detected in the included studies. This affected the certainty of evidence of the meta-analyzed outcomes which ranged from low to very low. No studies reported in sufficient detail their interventions to be replicated. Overall, exercise and mind-body exercise may be ineffective in improving meta-analyzed outcomes. However, the certainty of evidence ranged from low to very low and the body of knowledge in this field needs to be increased to reach robust conclusions. Exercise and mind-boy exercises were not more effective than controls for eating behaviors in eating disorders. Exercise and mind-boy exercises were not more effective than controls for depression symptoms in eating disorders. Clinicians should be aware no specific exercises can be recommended for treating psychological factors in eating disorders.
DOI: 10.6084/m9.figshare.25997591.v1
title: Exercise and mind-body exercise for feeding and eating disorders: a systematic review with meta-analysis and meta-regressions

description: To develop a systematic review with meta-analysis to summarize the effectiveness of exercise, regular physical activity, and mind-body exercise on harmful exercise habits, psychological factors, and quality of life in people clinically diagnosed with feeding and eating disorders. Randomized clinical trials and pilot randomized clinical trials were considered. Twelve studies were included. No studies evaluated athletes. No studies examined regular physical activity as the targeted intervention. Quality of life could not be meta-analyzed. Overall, meta-analyses showed that exercise or mind-body exercise was not more effective than controls in reducing depression symptoms, harmful exercise habits, eating behaviors, or emotional regulation skills. However, important methodological and clinical issues were detected in the included studies. This affected the certainty of evidence of the meta-analyzed outcomes which ranged from low to very low. No studies reported in sufficient detail their interventions to be replicated. Overall, exercise and mind-body exercise may be ineffective in improving meta-analyzed outcomes. However, the certainty of evidence ranged from low to very low and the body of knowledge in this field needs to be increased to reach robust conclusions. Exercise and mind-boy exercises were not more effective than controls for eating behaviors in eating disorders. Exercise and mind-boy exercises were not more effective than controls for depression symptoms in eating disorders. Clinicians should be aware no specific exercises can be recommended for treating psychological factors in eating disorders.
DOI: 10.6084/m9.figshare.27824001.v3
title: Automatic generation of 3D landmark symbols based on topological perception 2024 11 18

description: Automatic generation of 3D landmark symbols based on topological perception
DOI: 10.5281/zenodo.13741731
title: Data set: Cl+ and HCl+ in Reaction with H2 and Isotopologues: a Glance into H-abstraction and Indirect Exchange at Astrophysical Conditions

description: Raw data and post processing script for 10.1021/acsearthspacechem.4c00414
DOI: 10.5281/zenodo.13741732
title: Data set: Cl+ and HCl+ in Reaction with H2 and Isotopologues: a Glance into H-abstraction and Indirect Exchange at Astrophysical Conditions

description: Raw data and post processing script for 10.1021/acsearthspacechem.4c00414
DOI: 10.5281/zenodo.13316474
title: National Checklists 2019: Ethiopia Species List

description: Lists of taxa for each country and a few other administrative zones harvested from effechecka using simplified versions of geonames polygons. See https://github.com/diatomsRcool/checklists for details.
A list of species from Ethiopia collected using effechecka and geonames polygons
DOI: 10.5281/zenodo.13316853
title: National Checklists 2019: Spain Species List (untrusted)

description: Lists of taxa for each country and a few other administrative zones harvested from effechecka using simplified versions of geonames polygons. See https://github.com/diatomsRcool/checklists for details.
A list of species from Spain collected using effechecka and geonames polygons

***this resource uses the wrong query in its source link***
DOI: 10.15468/dl.3z67mh
title: Occurrence Download

description: A dataset containing 1008197 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Hypericum montanum L., Hypericum perforatum L., Hypericum maculatum Crantz)"
 ]
}

 The dataset includes 1008197 records from 4162 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020730-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.58160/zqdvpgjvdxwenvld
title: Thermodynamic Stability at the Two-Particle Level - Numerical results for the two-orbital Hubbard model (beta = 50 two-particle functions, additional results for U = 1.50)

description: This dataset contains a part of the DMFT/QMC results for the example of the two-orbital Hubbard model shown in the article "Thermodynamic Stability at the Two-Particle Level". It contains additional statistically independent results (i.e. using multiple different PRNG seeds) for the two-particle Green's functions at inverse temperature beta = 50 and Hubbard interaction parameter U = 1.50. Other numerical results can be found in the main dataset listed under related identifiers and its other subdatasets.
description: All data files are zstd-compressed HDF5 output files as generated by w2dynamics for worm-sampling calculations of the two-particle Green's functions of the auxiliary impurity problem of two-orbital Hubbard models on a Bethe lattice with density-density interaction with fixed ratios between the interaction coefficients at inverse temperature beta = 50 and Hubbard interaction parameter U = 1.50. The individual file names contain the chemical potential μ, e.g. '_mu1.33380_' for μ=1.3338, the letter 'u'(pward), 'd'(ownward), or 'i'(nstable) indicating a procedural detail that is related to the phase if the parameters of the solution are in the coexistence region (the corresponding phases are the insulating or strongly correlated metallic one, the weakly correlated metallic one, and the unstable metallic one respectively), and a PRNG seed index, e.g. '_s2_' for index 2. More detailed descriptions and instructions can be found in the included readme file or the technical remarks on the main dataset.
description: We are grateful for funding support from the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany’s Excellence Strategy through the Würzburg-Dresden Cluster of Excellence on Complexity and Topology in Quantum Matter ct.qmat (EXC 2147, Project ID 390858490) as well as through the Collaborative Research Center SFB 1170 ToCoTronics (Project ID 258499086).
description: Numerical calculation
description: The authors gratefully acknowledge the Gauss Centre for Supercomputing e.V. (www.gauss-centre.eu) for funding this project by providing computing time on the GCS Supercomputer SuperMUC-NG at Leibniz Supercomputing Centre (www.lrz.de).
DOI: 10.15468/dl.xv8sq9
title: Occurrence Download

description: A dataset containing 379 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Brazil",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Crotalus durissus Linnaeus, 1758",
 "Year 2014-2023"
 ]
}

 The dataset includes 379 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014782-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k99bs6
title: Occurrence Download

description: A dataset containing 9271 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "TaxonKey is Ambystoma laterale Hallowell, 1856",
 "Year 1984-2024"
 ]
}

 The dataset includes 9271 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014783-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14025715
title: eDNA replicates, polymerase and amplicon size impact inference of richness across habitat

description: Environmental DNA-based monitoring has been increasingly used in the last decade to monitor biodiversity in aquatic and terrestrial systems. Molecular-based surveys now allow quick and reliable production of baseline knowledge of species community composition on a large scale, allowing better understanding of ecosystem function and mitigation of stressors linked to anthropogenic activities. Despite this, technical hurdles often remain, and the impact of replicates, PCR polymerases and amplicon size on the recovered species richness is still poorly understood. Here, we conducted a large controlled experiment, with bulk samples collected from terrestrial, marine and freshwater environments to assess the impact of natural and technical replicates, PCR polymerases with different degrees of fidelity or proofreading activity, as well as amplicon size on species richness recovery across habitats. In this study, we consistently found variations in sample species richness depending on PCR polymerase choice. We further demonstrate the dissimilar impacts between natural and technical replicates on species richness recovery, and the necessity of increasing natural replications in eDNA based surveys. We highlight the benefits and limitations of replication strategies, polymerase choice and amplicon size across terrestrial, marine and freshwater habitats, and provide recommendations to increase the reliability of future eDNA-based metabarcoding studies.
DOI: 10.5281/zenodo.14025716
title: eDNA replicates, polymerase and amplicon size impact inference of richness across habitat

description: Environmental DNA-based monitoring has been increasingly used in the last decade to monitor biodiversity in aquatic and terrestrial systems. Molecular-based surveys now allow quick and reliable production of baseline knowledge of species community composition on a large scale, allowing better understanding of ecosystem function and mitigation of stressors linked to anthropogenic activities. Despite this, technical hurdles often remain, and the impact of replicates, PCR polymerases and amplicon size on the recovered species richness is still poorly understood. Here, we conducted a large controlled experiment, with bulk samples collected from terrestrial, marine and freshwater environments to assess the impact of natural and technical replicates, PCR polymerases with different degrees of fidelity or proofreading activity, as well as amplicon size on species richness recovery across habitats. In this study, we consistently found variations in sample species richness depending on PCR polymerase choice. We further demonstrate the dissimilar impacts between natural and technical replicates on species richness recovery, and the necessity of increasing natural replications in eDNA based surveys. We highlight the benefits and limitations of replication strategies, polymerase choice and amplicon size across terrestrial, marine and freshwater habitats, and provide recommendations to increase the reliability of future eDNA-based metabarcoding studies.
DOI: 10.5519/qd.1y58e6hm
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (691 records)
DOI: 10.5519/qd.59u46lsv
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3017 records)
DOI: 10.15468/dl.8gadpe
title: Occurrence Download

description: A dataset containing 1290803 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is Apocynaceae"
 ]
}

 The dataset includes 1290803 records from 2474 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014780-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26666425.v1
title: Additional file 7 of CD4 T-cell aging exacerbates neuroinflammation in a late-onset mouse model of amyotrophic lateral sclerosis

description: Additional file 7: Table S6. Upregulated Immune-related KEGG pathways in lumbar spinal cords of SOD1G37R mice. The table delineates the KEGG pathways found to be upregulated in lumbar SC samples, as determined by bulk RNA-seq analysis. Columns from left to right represent the pathway name, gene ratio, and p.adjust.
DOI: 10.6084/m9.figshare.26666437
title: Additional file 1 of Identification of an ADME-related gene for forecasting the prognosis and responding to immunotherapy in sarcomas

description: Additional file 1: Table S1. The genes related to ADME.
DOI: 10.6084/m9.figshare.26666437.v1
title: Additional file 1 of Identification of an ADME-related gene for forecasting the prognosis and responding to immunotherapy in sarcomas

description: Additional file 1: Table S1. The genes related to ADME.
DOI: 10.6084/m9.figshare.26666440
title: Additional file 2 of Identification of an ADME-related gene for forecasting the prognosis and responding to immunotherapy in sarcomas

description: Additional file 2: Table S2. The genes related to immune checkpoint blockers.
DOI: 10.6084/m9.figshare.26666440.v1
title: Additional file 2 of Identification of an ADME-related gene for forecasting the prognosis and responding to immunotherapy in sarcomas

description: Additional file 2: Table S2. The genes related to immune checkpoint blockers.
DOI: 10.6084/m9.figshare.26666443
title: Additional file 3 of Identification of an ADME-related gene for forecasting the prognosis and responding to immunotherapy in sarcomas

description: Additional file 3: Table S3. The mRNAs related to prognosis in sarcomas.
DOI: 10.6084/m9.figshare.26666443.v1
title: Additional file 3 of Identification of an ADME-related gene for forecasting the prognosis and responding to immunotherapy in sarcomas

description: Additional file 3: Table S3. The mRNAs related to prognosis in sarcomas.
DOI: 10.6084/m9.figshare.26666446
title: Additional file 1 of Accelerated immune ageing is associated with COVID-19 disease severity

description: Additional file 1: Supplementary Figure 1. The long-term impact of COVID-19 on CD8 T cell subset distribution. Comparison of circulating numbers of: (A) CD8 T cells; (B) Naïve; (C) Memory; (D) Central memory; (E) Effector memory; (F) EMRA CD8 T cells between healthy age and sex matched controls (n = 39), moderate (n = 14) and severe (n = 46) COVID-19 convalescent patients. If not indicated, p value is not significant. Supplementary Figure 2. The long-term impact of COVID-19 on CD4 T cell subset distribution. Comparison of the systemic numbers of: (A) CD4 T cells; (B) Naïve CD4 T cells; (C) Memory CD4 T cells; (D) Central memory CD4 T cells; (E) Effector memory CD4 T cells; (F) EMRA CD4 T cells in healthy age and sex-matched controls (n = 39), moderate (n = 14) and severe (n = 46) COVID-19 survivors 3-5 months post-infection. Statistical analysis by two-sided Mann–Whitney non-parametric test. If not indicated, p-value is not significant. Supplementary Figure 3. CD4 T cell senescence and exhaustion post-COVID-19. Comparison of: (A) absolute numbers of CD28-veCD57+ve CD8 T cells in healthy age and sex matched controls (n = 39), moderate (n = 14) and severe (n = 46) COVID-19 convalescent patients; (B) percentage of CD28-veCD57+ve CD4 T cells in (n = 59) and mild (n = 15), moderate (n = 29) and severe (n = 55) COVID-19 survivors 3-5 months post-infection; (C) absolute numbers of CD28-veCD57+ve CD4 T cells in healthy age and sex matched controls (n = 39), moderate (n = 14) and severe (n = 46) COVID-19 convalescent patients; (D) absolute numbers of KLRG1+ve CD8 T cells in healthy age and sex matched controls (n = 39), moderate (n = 14) and severe (n = 46) COVID-19 convalescent patients; (E) percentage of KLRG1+ve CD4 T cells in (n = 59) and mild (n = 15), moderate (n = 29) and severe (n = 55) COVID-19 survivors 3-5 months post-infection; (F) absolute numbers of KLRG1+ve CD4 T cells in healthy age and sex matched controls (n = 39), moderate (n = 14) and severe (n = 46) COVID-19 convalescent patients. (G) percentage and (H) absolute numbers of PD1+ve CD4 T cells in healthy age and sex-matched controls (n = 21) and severe (n = 18) COVID-19 convalescent patients. Statistical analysis by two-sided Mann–Whitney non-parametric test. If not indicated, p-value is not significant. Supplementary Figure 4. B cell subsets post-COVID-19. Absolute numbers of systemic: (A) memory B cells; (B) plasma B cells; (C) regulatory B cells in healthy age and sex-matched controls (n = 39), moderate (n = 14) and severe (n = 46) COVID-19 convalescent patients. Statistical analysis by two-sided Mann–Whitney non-parametric test. If not indicated, p-value is not significant.