cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.1049137
title: Mars surface image (Curiosity rover) labeled data set

description: This data set consists of 6691 images spanning 24 classes that were collected by the Mars Science Laboratory (MSL, Curosity) rover by three instruments (Mastcam Right eye, Mastcam Left eye, and MAHLI). These images are the "browse" version of each original data product, not full resolution. They are roughly 256x256 pixels each. We divided the MSL images into train, validation, and test data sets according to their sol (Martian day) of acquisition. This strategy was chosen to model how the system will be used operationally with an image archive that grows over time. The images were collected from sols 3 to 1060 (August 2012 to July 2015). The exact train/validation/test splits are given in individual files. Full-size images can be obtained from the PDS at https://pds-imaging.jpl.nasa.gov/search/ . <strong>Contents</strong>: calibrated/: Directory containing calibrated MSL images train-calibrated-shuffled.txt: Training labels (images in shuffled order) val-calibrated-shuffled.txt: Validation labels test-calibrated-shuffled.txt: Test labels msl_synset_words-indexed.txt: Mapping from class IDs to class names <strong>Attribution</strong>: If you use this data set in your own work, please cite this DOI: 10.5281/zenodo.1049137 Please also cite this paper, which provides additional details about the data set. Kiri L. Wagstaff, You Lu, Alice Stanboli, Kevin Grimes, Thamme Gowda, and Jordan Padams. "Deep Mars: CNN Classification of Mars Imagery for the PDS Imaging Atlas." <em>Proceedings of the Thirtieth Annual Conference on Innovative Applications of Artificial Intelligence</em>, 2018.
description: {"references": ["Kiri L. Wagstaff, You Lu, Alice Stanboli, Kevin Grimes, Thamme Gowda, and Jordan Padams. \"Deep Mars: CNN Classification of Mars Imagery for the PDS Imaging Atlas.\" Proceedings of the Thirtieth Annual Conference on Innovative Applications of Artificial Intelligence, 2018."]}
DOI: 10.5281/zenodo.6203174
title: Data and ancillary data for publication: Natural infrastructure and water erosion mitigation in the Andes

description: The data contain information on the effectiveness of natural infrastructure to mitigate soil erosion. Data were compiled from 118 case studies from the Andean region, whereby information on natural infrastructure interventions, soil erosion and soil quality were tabulated and analysed. The data contains the following documents:<br> -Database with data on soil erosion, soil quality for different types of natural infrastructure (118 case studies)<br> -Metadata<br> -Summary of terms used in the systematic review of the literature (in Spanish and English)<br> -List of bibliographic data sources that were searched with the search terms<br> -Full bibliographic references of all 118 case studies <strong>Full reference </strong> <em>Vanacker V, Molina A, Rosas-Barturen M, Bonnesoeur V, Román-Dañobeytia F, Ochoa-Tocachi B, Buytaert W (2022). The effect of natural infrastructure on water erosion mitigation in the Andes. </em>
description: {"references": ["Vanacker et al. (2022) The effect of natural infrastructure on water erosion mitigation in the Andes. Soil, 8, 133-147. https://doi.org/10.5194/soil-8-133-2022"]}
DOI: 10.5281/zenodo.7108842
title: Pye et al. Tectonics Release

description: Supporting Information dataset associated with manuscript in Tectonics titled: 'Prolonged Slip on the South Tibetan Detachment Constrains Tectonic Models for Synorogenic Extension in the Central Himalaya'.
DOI: 10.6084/m9.figshare.21443238
title: Supplementary Material for: Gaming Disorder and Psychotic Disorders: A Scoping Review

description: <b><i>Background:</i></b> There is a growing interest in understanding the impact of video games in the clinical field, given that their excessive use could be associated with health issues. Particularly, gaming disorder (GD) is considered as an addictive behavioral disorder. Clinicians widely recognize the comorbidity of gaming and psychotic disorders (PDs). Furthermore, association between addictive (i.e., substance use disorders) and PDs are well recognized by clinicians. It seems of high interest to explore GD among people with PDs. To this day, little is known about the consequences of GD in vulnerable populations. <b><i>Objectives:</i></b> The aim of this scoping review was to summarize the available research on the comorbidity between GD and PD and to identify the knowledge gaps in this field. <b><i>Methods:</i></b> We used Levac’s six-stage methodology for scoping review. Two-hundred and forty-two articles from seven databases were identified. Eight articles respected our inclusion and exclusion criteria. <b><i>Results:</i></b> No available study has assessed the prevalence or incidence of GD among patients with PDs. The cases reported highlight the possibility that excessive video gameplay or abrupt gaming disruption could trigger psychosis in some patients. <b><i>Conclusion:</i></b> The results highlight a significant lack of knowledge concerning PDs associated with GD as only a few reported cases and one empirical study exposed the potential association between those conditions.
DOI: 10.6084/m9.figshare.21443334
title: Supplementary Material for: Unplanned 30-Day Readmission Rates for Autosomal Dominant Polycystic Kidney Disease: Insight from the Nationwide Readmissions Database

description: <b><i>Introduction:</i></b> Among end-stage kidney disease (ESKD) patients on dialysis with autosomal dominant polycystic kidney disease (ADPKD), relatively little is known about the epidemiology and risk factors for 30-day readmissions in the USA. Therefore, we evaluated the 30-day unplanned readmission rates and predictors and inpatient care costs among ESKD patients with and without ADPKD using a nationally representative, all-payer database. <b><i>Methods:</i></b> We utilized the Nationwide Readmissions Database from 2013 to 2018 to identify patients admitted for ESKD on dialysis with and without ADPKD using ICD-9 and ICD-10 codes. The primary outcome was a 30-day, unplanned readmission rate. Secondary outcomes were readmission reasons and timing, mortality, cost of hospitalization and rehospitalization, and adjusted predictors of readmissions. We used χ<sup>2</sup> tests, <i>t</i> tests, and Wilcoxon rank-sum tests for descriptive analyses and survey logistic regression to calculate adjusted odds ratios and 95% confidence intervals for associations with readmissions adjusting for confounders. <b><i>Results:</i></b> From 2013 to 2018, in a cohort of 1,404,144 hospitalizations with ESKD on dialysis as the primary and secondary diagnosis on index admission, there were 8,213 (0.58%) patients with ADPKD and 1,395,932 patients without ADPKD. Those who had ADPKD during index admissions had fewer 30 days readmissions (18.8 vs. 23.8%, <i>p</i> &lt; 0.0001). The cost of hospitalizations and readmissions in ESKD on-dialysis patients with ADPKD was higher than non-ADPKD patients. Compared to ESKD patients without ADPKD who were readmitted, readmitted ADPKD patients were more likely to be younger with a lower Elixhauser Comorbidity Index (ECI) score; have received kidney transplant, lower source of income, elective index admissions, private insurance; and be discharged routinely, admitted in hospitals with larger bed size, in teaching hospitals, and less likely to get admitted through the emergency department. Younger age (&lt;75 years), higher ECI score, longer length of stay, Medicare and Medicaid insurance, self-pay, discharge to a short-term hospital, specialized care, home health care, and against medical advice were associated with significantly increased odds of readmission. ADPKD patients were 31% less likely to get readmitted and 43% less likely to die during readmissions. <b><i>Discussion/Conclusion:</i></b> Nationwide, ESKD on-dialysis patients with ADPKD were less likely to have 30-day readmission than patients without ADPKD. Inpatient mortality during readmissions in patients admitted with ESKD on dialysis was lower with ADPKD as compared to those without ADPKD at the cost of higher health care expenses.
DOI: 10.6084/m9.figshare.6233198
title: Phylogenies of nitrogen acquisition and metabolism genes in the model marine diatom Phaeodactylum tricornutum

description: Phylogenies were constructed to infer evolutionary origins of key nitrogen metabolism-related genes from the genome of the model pennate diatom <i>Phaeodactylum tricornutum.</i> <br>
DOI: 10.5281/zenodo.7128836
title: Local Indicators of Climate Change Impacts reported by the Tuareg of Illizi (Algeria)

description: The dataset reports the Local Indicators of Climate Change Impacts mentioned during 19 interviews and 3 focus groups with members of the Tuareg community of Illizi (Algeria). The dataset includes reports events important to the local timeline and observations of atmospheric changes including seasonal, precipitation, temperature, and biodiversity changes.
DOI: 10.18112/openneuro.ds003768.v1.0.8
title: Simultaneous EEG and fMRI signals during sleep from humans
DOI: 10.5281/zenodo.7198850
title: Dataset for: Stronger Response to the Aerosol Indirect Effect due to Cooling in Remote Regions

description: Data and Python scripts for generating the figures in Huusko, L., Modak, A., & Mauritsen, T. (2022): Stronger Response to the Aerosol Indirect Effect due to Cooling in Remote Regions. <em>Geophysical Research Letters</em>, 49, e2022GL101184. https://doi.org/10.1029/2022GL101184
DOI: 10.11578/1544562
title: 2019 Annual Technology Baseline ATB Cost and Performance Data for Electricity Generation Technologies

description: Starting in 2015 NREL has presented the Annual Technology Baseline ATB in an Excel workbook that contains detailed cost and performance data both current and projected for renewable and conventional technologies. The workbook includes a spreadsheet for each technology. This updated version of the workbook provides data for the 2019 ATB. This year NREL is also providing a packaged Tableau workbook and structured summary csv files. A website documents this data at https//atb.nrel.gov.
DOI: 10.17632/s6gvrztrrc.3
title: Data For: Insights into the Microbial-Rock-CO2 Interactions in Carbonates

description: Supporting Information for the paper "Impact of Microbial-Rock-CO2 Interactions on Containment and Storage Security of Supercritical CO2 in Carbonates"
DOI: 10.17632/wdwf5hgt7b.1
title: Contrast Discrimination Templates

description: Supplementary data and analysis in support of "Classification Images for Contrast Discrimination" by W McIlhagga, in Vision Research
DOI: 10.5286/isis.e.rb1910561
title: Studying the strength of acid sites in an industrial ZSM-5 catalyst: MAPS

description: As part of an on-going programme of work to better understand critical factors in the methanol-to-hydrocarbon process over ZSM-5 zeolite catalysts, it is becoming increasingly important to more precisely describe the nature and form of the active site distribution.  This proposal seeks to use the MAPS spectrometer to analyse pyridine chemisorption over ZSM-5 that has experienced specific sample treatments.  The MAPS measurements will concentrate on hydroxyl modes (stretch and deformation) associated with Brønsted acidity and the pyridinium N-H stretch modes generated by reaction with pyridine.  A linked application for TOSCA time will concentrate on characterising the presence and diminution of pyridinium ion modes as a function of the reaction coordinate.
DOI: 10.6084/m9.figshare.21443211
title: Supplementary Material for: Multiparametric Neuroimaging and Its Association with Non-Contrast Computed Tomography in Late-Window Large Vessel Occlusion Acute Stroke

description: <b><i>Introduction:</i></b> Endovascular treatment (EVT) for acute ischemic stroke (AIS) between 6 and 24 h is established as a standard of care among patients selected by multiparametric neuroimaging. We aimed to explore neuroimaging parameters in late-window large vessel occlusion (LVO) patients and its association with non-contrast computed tomography (NCCT) findings. <b><i>Methods:</i></b> We included consecutive AIS patients within 6–24 h from the symptoms onset with LVO. We described multiparametric imaging findings, the rate of patients who fulfilled imaging perfusion criteria according to the DAWN and DEFUSE-3 trials that define the computed tomography perfusion mismatch (CTP-MM) group and its association with NCCT focused on Alberta Stroke Program Early CT Score (ASPECTS). We also analyzed the association between neuroimaging parameters and the clinical outcome determined by the 90-day modified Rankin scale (mRS). <b><i>Results:</i></b> We included 206 patients, of them, 176 (85.4%) presented CTP-MM and 184 (89.3%) presented an ASPECTS ≥6 on admission. The rate of CTP-MM was 90.8% in patients with ASPECTS ≥6, compared with 40.9% in those with low ASPECTS. ASPECTS was moderately correlated with ischemic core determined by cerebral blood flow &lt;30% volume (rS = −0.557, <i>p</i> &lt; 0.001). In EVT-treated patients (185, 89.8%), after adjusting for identifiable confounders, the presence of CTP-MM was a predictor of 90-day functional independence (OR: 3.38; 95% CI: 1.01–11.29; <i>p</i> = 0.048). We did not find an association between CTP-MM and 90-day functional disability (ordinal mRS shift, aOR: 1.39; 95% CI: 0.58–3.34; <i>p</i> = 0.459). <b><i>Conclusions:</i></b> A great majority of patients who presented a LVO in the late window fulfilled guidelines imaging criteria to undergo EVT, especially those with high ASPECTS (≥6). Our data suggest that NCCT with CT angiography could be a reasonable approach for AIS treatment selection also in the late window.
DOI: 10.12751/g-node.pwn4qz
title: Time-To-Contact project

description: Raw data for the Time-To-Contact project.
description: IsSupplementTo: Polti, I., Nau, M., Kaplan, R., van Wassenhove, V. & Doeller, C. F. (2022). Rapid encoding of task regularities in the human hippocampus guides sensorimotor timing. eLife 11:79027. (https://doi.org/10.7554/eLife.79027)
DOI: 10.17632/xmwk5twyzm.1
title: Palliative care, end-of-life care, and COVID-19: scoping review

description: The present dataset contains the publications from a scoping review of the literature about palliative care and end-of-life care in adults during the COVID-19 pandemic.
DOI: 10.5281/zenodo.4680972
title: QTautobase: A quantum tautomerization database

description: Equilibrium structures of the tautobase(reference) optimized at the level of theory of popular quantum chemical databases (QM9,PC9 and ANI-E). The structures were generated from the SMILES structures of the original publication and then optimized using Gaussian09. For simplicity, structures are divided on type 'A' and 'B'. The database consists of 1257 pairs (2514 molecules) for each database evaluated. The format of the database is .xyz
description: Founding by the Swiss National Science Foundation (NCCR- MUST and Grant No. 200021-7117810)
DOI: 10.5281/zenodo.7013272
title: NaciaLuo/lunar-oblique-impact-ejecta: First release

description: This repository includes ejecta launch velocities, launch angles, and ejecta deposit patterns from iSALE-3D simulations. Please note the iSALE-3D code is distributed on a case-by-case basis in the impact community, restricted to non-commercial use.
DOI: 10.6078/m7rf5rz7
title: Çukuriçi Höyük Zooarchaeology Data
DOI: 10.5281/zenodo.3633594
title: alagain/martian_crater_database: Submitted to GSA LMI VI with coherent file renaming

description: Submitted to GSA LMI VI with coherent file renaming
DOI: 10.6084/m9.figshare.21444111
title: Supplementary Material for: Nail Changes during Pregnancy: A Cross-Sectional Survey of Patients at an Academic Center

description: <b><i>Introduction:</i></b> Physiological changes in skin and hair are common during pregnancy. There are limited data on nail changes during pregnancy. Therefore, our study objectives were to determine prevalence and types of nail changes in pregnant women. <b><i>Methods:</i></b> A prospective study was conducted in the Weill Cornell Obstetrics and Gynecology waiting room, where a 32-question survey was administered to pregnant and nonpregnant patients. <b><i>Results:</i></b> There was a total of 167 subjects (73 pregnant, 94 nonpregnant). Nail changes were reported by 25/73 (34.2%) and 12/94 (12.8%) pregnant and nonpregnant women, respectively (<i>p</i> &lt; 0.05). Onychocryptosis and leukonychia were more common in pregnant (12.3% and 13.7%, respectively) versus nonpregnant women (5.3% and 0%, respectively) (<i>p</i> &lt; 0.05). The majority of patients reported no changes in nail growth, thickness, brittleness, during their pregnancies. <b><i>Discussion/Conclusion:</i></b> Most nail changes in pregnant and nonpregnant women are similar. Physicians should educate women that onychocryptosis and leukonychia are common and benign findings during pregnancy.
DOI: 10.17632/h6d5jhmypf.2
title: Concerted two-proton-coupled electron transfer (2PCET) reaction between 1,2-dihydroxynaphthalene and superoxide radical anion

description: 2PCET mechanisms between 1,2-dihydroxynaphthalene (12H2NQ) and superoxide radical anion (O2•−) in N,N-dimethylformamide. The 2PCET occurs as an intra-complex reaction after the formation of prereactive complex. This reaction was theoretically obtained using the density functional theory (DFT) level with the Becke three-parameter Lee–Yang–Parr functional.
DOI: 10.5281/zenodo.3872168
title: HPC Production Trace

description: Job trace includes 14M jobs from a production high performance computing cluster consisting of 14,376 cores. Each job entry includes its submission time, user ID, maximum running time limit, requested number of cores and memory, and running time. We have formatted the trace in hierarchical data format (hdf) format). ## Important Data Fields * *userid*: The user identification number. (Integer) * *wallclock_runtime_sec*: Actual job runtime in seconds. (Integer) * *wallclock_limit_sec*: Maximum runtime limit specified by the user. (Integer) * *num_cores*: Number of CPU requested for the job. (Integer) * *total_MB_req*: Memory in MB requested for the job. (Integer) * *status*: Status of the job (String) * *time*: Timestamp when job queued. (Timestamp)
DOI: 10.5281/zenodo.5513022
title: FaIR v1.6.2 calibrated and constrained parameter set

description: This .json file provides the 2237 ensemble members that are used to run the FaIR simple climate model in the IPCC's Sixth Assessment Report contributions to Working Group 1 and Working Group 3. Drawn from an initial prior ensemble of 1 million, the following constraints are placed upon the results: representation of observed warming from 1850-2019, within observational uncertainty representation of observed ocean heat content change 1971-2018, within observational uncertainty reproduction of near-present day atmospheric concentrations of CO2 from the carbon cycle airborne fraction of CO2 with a distribution similar to the assessed range of Chapter 5, IPCC Working Group 1 AR6 equilibrium climate sensitivity with a similar distribution to Chapter 7, IPCC Working Group 1, AR6 transient climate response with a similar distribution to Chapter 7, IPCC Working Group 1, AR6 projected future warming that is of a similar distribution to the SSP scenarios of Chapter 4, IPCC Working Group 1, AR6, when run with prescribed concentrations
DOI: 10.5281/zenodo.7041587
title: tmdavison/ComplexCraterScalingData: v1.0.1

description: Dataset for "Complex crater formation by oblique impacts on the Earth and Moon" by TM Davison and GS Collins, submitted to GRL iSALE3D input files are provided for all simulations run in this study Python plotting scripts are provided to generate the figures in the paper Reduced data sets are provided to allow readers to reproduce the figures in the paper
DOI: 10.6084/m9.figshare.21205604.v1
title: Supplementary Material for: Convolution Neural Networks and Targeted Fluorescent Nanoparticles to Detect and ICDAS Score Caries

description: Previous work has shown targeted fluorescent starch nanoparticles (TFSNs) can label the subsurface of carious lesions and assist dental professionals in the diagnostic process. In this study, we aimed to evaluate the potential of using artificial intelligence (AI) to detect and score carious lesions using the ICDAS in combination with fluorescent imaging following application of TFSNs on teeth with a range of lesion severities, using ICDAS-labeled images as the reference standard. A total of 130 extracted human teeth with ICDAS scores from 0 to 6 were selected by a calibrated cariologist according to ICDAS. Then, the same surface was imaged with a stereomicroscope under white-light illumination, and blue-light illumination with an orange filter following application of the TFSNs. Both sets of images were labeled by another blinded ICDAS-calibrated cariologist to demarcate lesion position and severity. Convolutional Neural Networks, state-of-the-art models in imaging AI, were trained to determine the presence, location, ICDAS score (severity), and lesion surface porosity (as an indicator of activity) of carious lesions, and tested by 30 k-fold validation for white-light, blue-light, and the combined image sets. The best models showed high performance for the detection of carious lesions (sensitivity 80.26%, PPV 76.36%) and potential for determining the severity via ICDAS scoring (accuracy 72%, SD 5.67%) and the detection of surface porosity as an indicator of the activity of the lesions (accuracy 90%, SD 7.00%). More broadly, the combination of targeted biopolymer nanoparticles with imaging AI is a promising combination of novel technologies that could be applied to many other applications.
DOI: 10.5281/zenodo.7271230
title: Supplementary tables_S2 and S3

description: Supplementary materials: Moulíková Š, Kolařík M, Lorch JM, et al. 2022. Wild rodents harbour high diversity of<br> <em>Arthroderma</em>. Persoonia.
DOI: 10.6084/m9.figshare.21118606
title: Supplementary Material for: Does the Timing of Eribulin Treatment for Advanced or Metastatic Breast Cancer Matter? Evidence from a Real-World Setting

description: Background: This study aimed to examine the effectiveness and safety of eribulin used as an early-line (i.e., first/second-line; EL) versus late-line (i.e., third-line and beyond; LL) chemotherapy for recurrent advanced or metastatic breast cancer (A/MBC) patients. Methods: This study conducted a retrospective observation of A/MBC patients initiating eribulin between January 1, 2015, and June 30, 2019, using the medical database at a university-affiliated teaching hospital in Taiwan. Patients were assigned into either the EL or LL group based on the timing of respective eribulin treatments and were observed for at least six months up to December 2019 for progression-free survival (PFS), time to treatment failure (TTF), overall survival (OS), disease response, and occurrence of adverse events. The Kaplan-Meier and Cox proportional hazards regression survival analyses were performed. Results: Of 127 patients, 23.6% (n=30) and 76.4% (n=97) were assigned to the EL and LL groups, respectively, between which no difference in patient characteristics was noted. Median PFS and TTF were 6.5 months and 5.0 months for the EL and 4.2 months and 3.4 months for the LL, respectively. Median OS could not be estimated in the EL group and was 20.5 months in the LL group. Eribulin as an early-line treatment was the only factor associated with longer TTF and OS, whereas the number of metastatic sites was additionally associated with PFS in the multivariate analysis. No complete response was reported in either group, but a partial response was obtained in 6.7% in the EL group and 3.1% in the LL group. The common adverse events between the two groups were similar, including leukopenia (80.0%), neutropenia (76.7%), and anemia (60.0%). Conclusions: The eribulin used as an early-line of chemotherapy was effective for A/MBC patients with known toxicities in this study, while eribulin as the late-line chemotherapy showed consistent results with previous reports.