cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3516182.v1
title: Appendix B. True Skill Statistics for each optimal subset of elements.

description: True Skill Statistics for each optimal subset of elements.
DOI: 10.6084/m9.figshare.3516179
title: Appendix C. Normality indexes for each data set.

description: Normality indexes for each data set.
DOI: 10.6084/m9.figshare.3516179.v1
title: Appendix C. Normality indexes for each data set.

description: Normality indexes for each data set.
DOI: 10.6084/m9.figshare.3516176
title: Supplement 1. R code for the algorithm used in this paper.

description: File List compelt.r – R source code Description The compelt.r R program allows the generation of all possible combinations of a given list of chemical elements and compute the discrimination accuracy for each combination. Details of the inputs taken by the program and possible options are given in the header of the program. The outputs of the programs are tables given minimal, maximal and mean accuracies obtained for each size of combination, and a graphical view of this result is built.
DOI: 10.6084/m9.figshare.3516176.v1
title: Supplement 1. R code for the algorithm used in this paper.

description: File List compelt.r – R source code Description The compelt.r R program allows the generation of all possible combinations of a given list of chemical elements and compute the discrimination accuracy for each combination. Details of the inputs taken by the program and possible options are given in the header of the program. The outputs of the programs are tables given minimal, maximal and mean accuracies obtained for each size of combination, and a graphical view of this result is built.
DOI: 10.6084/m9.figshare.3516173
title: Appendix A. Relative abundance of all bird species recorded in 39 Phoenix, Arizona, USA neighborhoods.

description: Relative abundance of all bird species recorded in 39 Phoenix, Arizona, USA neighborhoods.
DOI: 10.6084/m9.figshare.3516173.v1
title: Appendix A. Relative abundance of all bird species recorded in 39 Phoenix, Arizona, USA neighborhoods.

description: Relative abundance of all bird species recorded in 39 Phoenix, Arizona, USA neighborhoods.
DOI: 10.6084/m9.figshare.3516170
title: Appendix A. ΔAIC values for the first set of models and the best model within this set (model 22).

description: ΔAIC values for the first set of models and the best model within this set (model 22).
DOI: 10.6084/m9.figshare.3516170.v1
title: Appendix A. ΔAIC values for the first set of models and the best model within this set (model 22).

description: ΔAIC values for the first set of models and the best model within this set (model 22).
DOI: 10.6084/m9.figshare.3516167
title: Appendix A. Proportion of released juvenile Lithobates sylvaticus reaching 10-, 20-, 30-, and 40-m distance from the forest edge in four forestry treatments in 2008 and 2009.

description: Proportion of released juvenile Lithobates sylvaticus reaching 10-, 20-, 30-, and 40-m distance from the forest edge in four forestry treatments in 2008 and 2009.
DOI: 10.6084/m9.figshare.3516167.v1
title: Appendix A. Proportion of released juvenile Lithobates sylvaticus reaching 10-, 20-, 30-, and 40-m distance from the forest edge in four forestry treatments in 2008 and 2009.

description: Proportion of released juvenile Lithobates sylvaticus reaching 10-, 20-, 30-, and 40-m distance from the forest edge in four forestry treatments in 2008 and 2009.
DOI: 10.6084/m9.figshare.3516164
title: Appendix A. Locations of wetland study sites included in the analysis.

description: Locations of wetland study sites included in the analysis.
DOI: 10.6084/m9.figshare.3516164.v1
title: Appendix A. Locations of wetland study sites included in the analysis.

description: Locations of wetland study sites included in the analysis.
DOI: 10.6084/m9.figshare.3516161
title: Appendix B. A table showing land cover classifications used in quantifying landscape structure at the 1-km and 10-km spatial extents examined, as they corresponded to the 1990s National Land Cover data (NLCD) classes.

description: A table showing land cover classifications used in quantifying landscape structure at the 1-km and 10-km spatial extents examined, as they corresponded to the 1990s National Land Cover data (NLCD) classes.
DOI: 10.6084/m9.figshare.3516161.v1
title: Appendix B. A table showing land cover classifications used in quantifying landscape structure at the 1-km and 10-km spatial extents examined, as they corresponded to the 1990s National Land Cover data (NLCD) classes.

description: A table showing land cover classifications used in quantifying landscape structure at the 1-km and 10-km spatial extents examined, as they corresponded to the 1990s National Land Cover data (NLCD) classes.
DOI: 10.6084/m9.figshare.3516158
title: Appendix C. Descriptive statistics for the explanatory variables for the 18 surveyed wetlands included in the analyses.

description: Descriptive statistics for the explanatory variables for the 18 surveyed wetlands included in the analyses.
DOI: 10.6084/m9.figshare.3516158.v1
title: Appendix C. Descriptive statistics for the explanatory variables for the 18 surveyed wetlands included in the analyses.

description: Descriptive statistics for the explanatory variables for the 18 surveyed wetlands included in the analyses.
DOI: 10.6084/m9.figshare.3516155
title: Appendix A. Sensitivity analyses conducted for models of critical density used for sexual species.

description: Sensitivity analyses conducted for models of critical density used for sexual species.
DOI: 10.6084/m9.figshare.3516155.v1
title: Appendix A. Sensitivity analyses conducted for models of critical density used for sexual species.

description: Sensitivity analyses conducted for models of critical density used for sexual species.
DOI: 10.6084/m9.figshare.3516152
title: Appendix B. Parameters used to calculate critical density values. See methods for information on the calculation of critical densities.

description: Parameters used to calculate critical density values. See methods for information on the calculation of critical densities.
DOI: 10.6084/m9.figshare.3516152.v1
title: Appendix B. Parameters used to calculate critical density values. See methods for information on the calculation of critical densities.

description: Parameters used to calculate critical density values. See methods for information on the calculation of critical densities.
DOI: 10.6084/m9.figshare.3516149
title: Appendix C. Methods used to calculate critical densities based on aggregation of zooplankton.

description: Methods used to calculate critical densities based on aggregation of zooplankton.
DOI: 10.6084/m9.figshare.3516149.v1
title: Appendix C. Methods used to calculate critical densities based on aggregation of zooplankton.

description: Methods used to calculate critical densities based on aggregation of zooplankton.
DOI: 10.6084/m9.figshare.3516146
title: Appendix D. Creation of spatial variables.

description: Creation of spatial variables.
DOI: 10.6084/m9.figshare.3516146.v1
title: Appendix D. Creation of spatial variables.

description: Creation of spatial variables.
DOI: 10.6084/m9.figshare.3516143
title: Appendix E. Simulated population growth for Diaphanosoma birgei and Holopedium gibberum.

description: Simulated population growth for Diaphanosoma birgei and Holopedium gibberum.
DOI: 10.6084/m9.figshare.3516143.v1
title: Appendix E. Simulated population growth for Diaphanosoma birgei and Holopedium gibberum.

description: Simulated population growth for Diaphanosoma birgei and Holopedium gibberum.
DOI: 10.6084/m9.figshare.3516140
title: Appendix A. Additional details of cottonwood model structure and parameterization.

description: Additional details of cottonwood model structure and parameterization.
DOI: 10.6084/m9.figshare.3516137
title: Appendix B. Classification and regression tree (CART) pruning using the rpart package in Program R.

description: Classification and regression tree (CART) pruning using the rpart package in Program R.
DOI: 10.6084/m9.figshare.3516134
title: Appendix A. Resource-use traits measured for 14 species at Big Morongo Canyon Preserve, California, USA.

description: Resource-use traits measured for 14 species at Big Morongo Canyon Preserve, California, USA.
DOI: 10.6084/m9.figshare.3516134.v1
title: Appendix A. Resource-use traits measured for 14 species at Big Morongo Canyon Preserve, California, USA.

description: Resource-use traits measured for 14 species at Big Morongo Canyon Preserve, California, USA.
DOI: 10.6084/m9.figshare.3516131
title: Appendix B. Average cover of species found in experimental plots in 2006 and 2008.

description: Average cover of species found in experimental plots in 2006 and 2008.
DOI: 10.6084/m9.figshare.3516131.v1
title: Appendix B. Average cover of species found in experimental plots in 2006 and 2008.

description: Average cover of species found in experimental plots in 2006 and 2008.
DOI: 10.6084/m9.figshare.3516128
title: Appendix C. A color version of Plate 1.

description: A color version of Plate 1.
DOI: 10.6084/m9.figshare.3516128.v1
title: Appendix C. A color version of Plate 1.

description: A color version of Plate 1.
DOI: 10.6084/m9.figshare.3516125
title: Appendix A. References providing data for the fire/soil C meta-analysis.

description: References providing data for the fire/soil C meta-analysis.
DOI: 10.6084/m9.figshare.3516125.v1
title: Appendix A. References providing data for the fire/soil C meta-analysis.

description: References providing data for the fire/soil C meta-analysis.
DOI: 10.6084/m9.figshare.3516122
title: Appendix A. Simulation study.

description: Simulation study.
DOI: 10.6084/m9.figshare.3516122.v1
title: Appendix A. Simulation study.

description: Simulation study.
DOI: 10.6084/m9.figshare.3516119
title: Appendix B. Derivation of full-conditional distributions.

description: Derivation of full-conditional distributions.
DOI: 10.6084/m9.figshare.3516119.v1
title: Appendix B. Derivation of full-conditional distributions.

description: Derivation of full-conditional distributions.
DOI: 10.6084/m9.figshare.3516116
title: Appendix C. Predictions for stands in the Department of Natural Resources survey.

description: Predictions for stands in the Department of Natural Resources survey.
DOI: 10.6084/m9.figshare.3516116.v1
title: Appendix C. Predictions for stands in the Department of Natural Resources survey.

description: Predictions for stands in the Department of Natural Resources survey.
DOI: 10.6084/m9.figshare.3516113
title: Supplement 1. R package containing annotated code used to conduct the analysis in this paper.

description: File List MistletoeBDR.zip -- zip file containing annotated R code, including all files listed below.<br> DESCRIPTION.txt<br> distmat.psi.Rd<br> distmat.Rd<br> mistletoeBDR-package.Rd<br> MistletoeCV.Rd<br> MistletoeCVFULL.Rd<br> MistletoeGibbs.Rd<br> MistletoeGibbsFULL.Rd<br> ScaleFactor.Rd<br> MistletoeCV.R<br> MistletoeCVFULL.R<br> MistletoeGibbs.R<br> MistletoeGibbsFULL.R<br> ScaleFactor.R<br> Description The file MistletoeBDR.zip contains an R package including R-functions and an annotated script file with the R-code needed to perform the complete analysis performed in the manuscript. All functions require R to run, as well as some additional packages, which should be installed automatically when the MistletoeBDR package is installed (see the package description file for more details). The annotated script file can be accessed by typing help mistletoeBDR at the R prompt after the mistletoeBDR package has been installed and loaded, or by examining the /man/mistletoeBDR-package.Rd file inside the compressed package file.
DOI: 10.6084/m9.figshare.3516113.v1
title: Supplement 1. R package containing annotated code used to conduct the analysis in this paper.

description: File List MistletoeBDR.zip -- zip file containing annotated R code, including all files listed below.<br> DESCRIPTION.txt<br> distmat.psi.Rd<br> distmat.Rd<br> mistletoeBDR-package.Rd<br> MistletoeCV.Rd<br> MistletoeCVFULL.Rd<br> MistletoeGibbs.Rd<br> MistletoeGibbsFULL.Rd<br> ScaleFactor.Rd<br> MistletoeCV.R<br> MistletoeCVFULL.R<br> MistletoeGibbs.R<br> MistletoeGibbsFULL.R<br> ScaleFactor.R<br> Description The file MistletoeBDR.zip contains an R package including R-functions and an annotated script file with the R-code needed to perform the complete analysis performed in the manuscript. All functions require R to run, as well as some additional packages, which should be installed automatically when the MistletoeBDR package is installed (see the package description file for more details). The annotated script file can be accessed by typing help mistletoeBDR at the R prompt after the mistletoeBDR package has been installed and loaded, or by examining the /man/mistletoeBDR-package.Rd file inside the compressed package file.
DOI: 10.6084/m9.figshare.3516110
title: Supplement 2. Tables of stand characteristics and results for all stands in the Minnesota Department of Natural Resources survey.

description: File List mistletoe.csv.zip -- zip file containing stand characteristics and results.<br> mistletoe.csv Description The file mistletoe.csv.zip contains mistletoe.csv, a table in comma-separated-value format containing stand characteristics and results for all spruce stands used in the analysis presented in the manuscript. For download verification, the CRC checksum for this csv file is 1541268812, and the byte count for this csv file is 6549149. The following variables are columns in this table. Additional information about the stand characteristics in the table can be found at the Minnesota DNR website. ID - Stand ID number. lat - Latitude of stand centroid, in degrees. long - Longitude of stand centroid, in degrees. mean prob of mistletoe - Mean posterior predictive probability of mistletoe presence in the stand. st.dev. of post.pred.dist. - Standard deviation of the posterior predictive probability of mistletoe presence in the stand. predicted phi - Mean posterior predictive probability of a "false positive" in the DNR survey, relative to the intensive survey. predicted psi - Mean posterior predictive probability of a "false negative" in the DNR survey, relative to the intensive survey. csize - Canopy size, ordinal variable. cdense - Canopy density, ordinal variable. usize - Undergrowth size, ordinal variable. udense - Undergrowth density, ordinal variable. si - Site index--related to the overall fitness of the stand. phys - Ordinal variable related to stand wetness (higher = wetter). age - Average age of trees in the stand. ba - Basal area per acre of trees in the stand. mbf - Thousand board feet (measure of stand volume). cond - Condition class. tbr - Timber management status. dbh - Diameter at breast height. height - Average canopy height. volume - Volume of stand in cords. mortal - Indicator variable. 1 = dead trees in stand, 0 = no dead trees. dense - Density of stand. infected - Indicator variable. 1 = DNR reports mistletoe present. topo1-3 - Indicator variables representing topographic characteristics of the stand. x - Easting coordinate. y - Northing coordinate. sp## - Indicator variables for the presence of different species. ctype## - Indicator variables for stand cover types for different species. utype## - Indicator variables for stand understory types for different species
DOI: 10.6084/m9.figshare.3516110.v1
title: Supplement 2. Tables of stand characteristics and results for all stands in the Minnesota Department of Natural Resources survey.

description: File List mistletoe.csv.zip -- zip file containing stand characteristics and results.<br> mistletoe.csv Description The file mistletoe.csv.zip contains mistletoe.csv, a table in comma-separated-value format containing stand characteristics and results for all spruce stands used in the analysis presented in the manuscript. For download verification, the CRC checksum for this csv file is 1541268812, and the byte count for this csv file is 6549149. The following variables are columns in this table. Additional information about the stand characteristics in the table can be found at the Minnesota DNR website. ID - Stand ID number. lat - Latitude of stand centroid, in degrees. long - Longitude of stand centroid, in degrees. mean prob of mistletoe - Mean posterior predictive probability of mistletoe presence in the stand. st.dev. of post.pred.dist. - Standard deviation of the posterior predictive probability of mistletoe presence in the stand. predicted phi - Mean posterior predictive probability of a "false positive" in the DNR survey, relative to the intensive survey. predicted psi - Mean posterior predictive probability of a "false negative" in the DNR survey, relative to the intensive survey. csize - Canopy size, ordinal variable. cdense - Canopy density, ordinal variable. usize - Undergrowth size, ordinal variable. udense - Undergrowth density, ordinal variable. si - Site index--related to the overall fitness of the stand. phys - Ordinal variable related to stand wetness (higher = wetter). age - Average age of trees in the stand. ba - Basal area per acre of trees in the stand. mbf - Thousand board feet (measure of stand volume). cond - Condition class. tbr - Timber management status. dbh - Diameter at breast height. height - Average canopy height. volume - Volume of stand in cords. mortal - Indicator variable. 1 = dead trees in stand, 0 = no dead trees. dense - Density of stand. infected - Indicator variable. 1 = DNR reports mistletoe present. topo1-3 - Indicator variables representing topographic characteristics of the stand. x - Easting coordinate. y - Northing coordinate. sp## - Indicator variables for the presence of different species. ctype## - Indicator variables for stand cover types for different species. utype## - Indicator variables for stand understory types for different species
DOI: 10.6084/m9.figshare.3516107
title: Appendix A. Annual mortality rate of Scots pine per diameter class; x-axis numbers are the central value of the class, and classes are each 5 cm wide.

description: Annual mortality rate of Scots pine per diameter class; x-axis numbers are the central value of the class, and classes are each 5 cm wide.
DOI: 10.6084/m9.figshare.3516107.v1
title: Appendix A. Annual mortality rate of Scots pine per diameter class; x-axis numbers are the central value of the class, and classes are each 5 cm wide.

description: Annual mortality rate of Scots pine per diameter class; x-axis numbers are the central value of the class, and classes are each 5 cm wide.
DOI: 10.6084/m9.figshare.3516101
title: Appendix B. Summary of the mortality (MR) models.

description: Summary of the mortality (MR) models.
DOI: 10.6084/m9.figshare.3516101.v1
title: Appendix B. Summary of the mortality (MR) models.

description: Summary of the mortality (MR) models.
DOI: 10.6084/m9.figshare.3516098
title: Appendix C. Annual basal area increment of Scots pine per diameter class; x-axis numbers are the central value of the class, and classes are each 5 cm wide.

description: Annual basal area increment of Scots pine per diameter class; x-axis numbers are the central value of the class, and classes are each 5 cm wide.
DOI: 10.6084/m9.figshare.3516095
title: Appendix D. Whole distribution of diameter classes in the IFN2; x-axis numbers are the central value of the class, and classes are each 5 cm wide.

description: Whole distribution of diameter classes in the IFN2; x-axis numbers are the central value of the class, and classes are each 5 cm wide.
DOI: 10.6084/m9.figshare.3516086
title: Appendix A. White pine blister rust model output for all 121 sites.

description: White pine blister rust model output for all 121 sites.
DOI: 10.6084/m9.figshare.3516086.v1
title: Appendix A. White pine blister rust model output for all 121 sites.

description: White pine blister rust model output for all 121 sites.
DOI: 10.6084/m9.figshare.3516083
title: Supplement 1. Source code and model output for white pine blister rust Bayesian infection model.

description: File List BayesianInfectionModel.R - R source code for infection model. Description The BayesianInfectionModel.R file contains commented R source code to run the four dynamic Bayesian white pine blister rust infection models described at length within the ‘Methods’ section of this paper. We are unable to provide the raw dataset used within this work, but this file outlines the computational process used to parameterize the model for the 121 sites within the Greater Yellowstone Ecosystem.
DOI: 10.6084/m9.figshare.3516083.v1
title: Supplement 1. Source code and model output for white pine blister rust Bayesian infection model.

description: File List BayesianInfectionModel.R - R source code for infection model. Description The BayesianInfectionModel.R file contains commented R source code to run the four dynamic Bayesian white pine blister rust infection models described at length within the ‘Methods’ section of this paper. We are unable to provide the raw dataset used within this work, but this file outlines the computational process used to parameterize the model for the 121 sites within the Greater Yellowstone Ecosystem.
DOI: 10.6084/m9.figshare.3516080
title: Appendix A. Generalized cropland systems.

description: Generalized cropland systems.
DOI: 10.6084/m9.figshare.3516080.v1
title: Appendix A. Generalized cropland systems.

description: Generalized cropland systems.
DOI: 10.6084/m9.figshare.3516077
title: Appendix B. Model performance measures comparing model crop-yield predictions against crop-yield observations by county.

description: Model performance measures comparing model crop-yield predictions against crop-yield observations by county.
DOI: 10.6084/m9.figshare.3516077.v1
title: Appendix B. Model performance measures comparing model crop-yield predictions against crop-yield observations by county.

description: Model performance measures comparing model crop-yield predictions against crop-yield observations by county.
DOI: 10.6084/m9.figshare.3516074
title: Appendix A. Description of parameter-estimation method.

description: Description of parameter-estimation method.
DOI: 10.6084/m9.figshare.3516074.v1
title: Appendix A. Description of parameter-estimation method.

description: Description of parameter-estimation method.
DOI: 10.6084/m9.figshare.3516071
title: Appendix B. Simulation results from the individually fitted models.

description: Simulation results from the individually fitted models.
DOI: 10.6084/m9.figshare.3516071.v1
title: Appendix B. Simulation results from the individually fitted models.

description: Simulation results from the individually fitted models.
DOI: 10.6084/m9.figshare.3516068
title: Appendix C. Derivation of equations used in the main text.

description: Derivation of equations used in the main text.
DOI: 10.6084/m9.figshare.3516068.v1
title: Appendix C. Derivation of equations used in the main text.

description: Derivation of equations used in the main text.
DOI: 10.6084/m9.figshare.3516065
title: Appendix A. Parameter values and results for snowshoe hare resource selection probability function (RSPF) and a linear model relating the intensity of snowshoe hare tracks with snowshoe hare RSPF.

description: Parameter values and results for snowshoe hare resource selection probability function (RSPF) and a linear model relating the intensity of snowshoe hare tracks with snowshoe hare RSPF.
DOI: 10.6084/m9.figshare.3516062
title: Appendix A. Nitrogen loading rates in coastal systems and experimental manipulations in which we based our loading-rates experimental design. Experimental design and calculation of the current fertilizer release rate.

description: Nitrogen loading rates in coastal systems and experimental manipulations in which we based our loading-rates experimental design. Experimental design and calculation of the current fertilizer release rate.