cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21273837.v1
title: Vector datasets for workshop "Introduction to Geospatial Raster and Vector Data with Python"

description: Cadaster data from PDOK used to illustrate the use of geopandas and shapely, geospatial python packages for manipulating vector data. The <code>brpgewaspercelen_definitief_2020.gpkg file has been subsetted in order to make the download manageable for workshops. Other datasets are copies of those available from PDOK.</code>
DOI: 10.6084/m9.figshare.8044727.v2
title: Transcriptomic Characterization of the Human Insular Cortex and Claustrum

description: Supplement data and tables for "Transcriptomic Characterization of the Human Insular Cortex and Claustrum" by Christine Ibrahim, Bernard Le Foll, and Leon French.<br>Supplement tables:1 - Genome-wide probe-level results for the long insular gyri and granular insular cortex 2 - Genome-wide probe-level results for the short insular gyri and dysgranular insular cortex3 - Complete gene ontology results for the long insular gyri4 - Complete gene ontology results for the short insular gyri5 - Complete DisGeNet results for the long insular gyri6 - Complete DisGeNet results for the short insular gyri7 - Genome-wide probe-level results for the claustrum<br>8 - Complete gene ontology results for the claustrum9 - Complete DisGeNet results for the claustrum<br>10 - Ranked cell proportion estimates for the regions of interest
DOI: 10.17632/cgxmff7jds
title: Frozen Lake q learning benchmark

description: This dataset observes a reinforcement learning agent, trained via Q learning, under the frozen lake game environment, developed by openAI gymnasium. The dataset records the success rate of this agent with different parameters.
DOI: 10.6084/m9.figshare.26827990.v3
title: CldNetV2 - 202202

description: Retrieval of all-day cloud property based on satellite remote sensing dataGithub page: https://github.com/metdai/PMD-CldNetV2
DOI: 10.6084/m9.figshare.5280877.v1
title: BROT plant functional trait database: Synonymous file

description: List of synonymous for some of the BROT species.
DOI: 10.6084/m9.figshare.5554621.v1
title: Experiment HaLT-SubjectI-160628-6States

description: Experiment in which subject performed 6 imageries of left and right hand motion, left and right leg motion, tongue motion, and a passive state.
DOI: 10.6084/m9.figshare.12869861.v1
title: OLD GT3X

description: GT3X file and CSV
DOI: 10.6084/m9.figshare.26380597.v1
title: The neural basis of swap errors in working memory

description: This is processed data underlying many of the main and supplementary figures in Alleman et al. (2023) https://doi.org/10.1101/2023.10.09.561584It includes time courses of neural activity around the key events of both the retrospective and prospective tasks, as well as relevant metadata from each trial (including the likelihood that the trial falls into each of the discussed response types). The neural activity is filtered with a 500ms width box car filter.To load and use these data, you can refer to the corresponding code, which is available in this github repository: https://github.com/wj2/swap_errorsIn brief, each pickle file contains the data from a particular task in a particular experimental session, and the neural data is binned around a specific time point -- all of this information is given in the file name: lmtc_(task)_all_(time)_(session number).pkl. Each pickle file is a dictionary with the following keys:"spks" : the binned spiketrains across neurons for every trial in the pickle"uc" : the upper color shown on each trial"lc" : the lower color shown on each trial"ps": the posterior probabilities of each response type, derived from the behavioral model. The first column is the probability of a correct response, the second column is a swap response, and the final column is a guess response."cues" : the cue shown on each trial -- 1 means the upper color is the target, 0 means the lower color is the target."other" : a dictionary with a little bit of additional information, most importantly "xs" which is the center of each of the 500 ms bins used for the spikes. Time zero is the time given in the file name (as in the other key in the "other" dictionary, "sequence").<br>
DOI: 10.17632/xr3ny45x2g
title: Dataset on political connections, Sharia, and abnormal returns surrounding M&A announcement in the Indonesian stock market

description: The dataset provided data on political connections, Sharia, short-run and long-run abnormal returns surrounding the M&A announcement of Indonesia listed firms between 2010 and 2016.
DOI: 10.17632/z9t3x4p5kk
title: Current Biology 2018 - Edsinger and Dölen

description: Supporting data for the Current Biology publication - A conserved role for serotonergic neurotransmission in mediating social behavior in octopus - by Edsinger and Dölen.
DOI: 10.6084/m9.figshare.28827662.v1
title: Supplementary Material for: MRI-Guided Adaptive Radiation Therapy for Oligometastatic Prostate Cancer Involving the Adrenal Gland: A Case Report and Literature Review

description: Metastasis-directed therapy is an evolving treatment modality for patients with oligometastatic prostate cancer. Although the microenvironment of the adrenal glands is enriched in androgen precursors, isolated adrenal metastases are rare. The application of stereotactic ablative radiotherapy to oligometastatic adrenal lesions has been limited due to toxicity concerns. Here, we report a patient with castration resistant prostate cancer and oligometastatic disease recurrence to the adrenal gland who underwent MRI-guided adaptive radiotherapy which allowed accurate delivery of stereotactic ablative radiotherapy (SBRT) while minimizing exposure to adjacent radio-sensitive organs. This approach was safe and resulted in long-term local and systemic disease control. In conclusion, this case highlights the potential role for MRI-guided SBRT in selected patients with oligometastatic prostate cancer to the adrenal glands.
DOI: 10.17632/v3bykvthr9
title: Hydrodynamics Matters: Unravelling the Gas Transfer Law for the Energy Dissipation Process in a High-energy Stream

description: The datasheet contains experimental data used to create all figures in the Water Resources Research paper.
DOI: 10.6084/m9.figshare.16609978.v1
title: Shenzhen chest X-ray set

description: Shenzhen Hospital X-ray Set:X-ray images in this data set have been collected by Shenzhen No.3 Hospital in Shenzhen, Guangdong providence,China. The x-rays were acquired as part of the routine care at Shenzhen Hospital. The set contains images in JPEG format. There are 326 normal x-raysand 336 abnormal x-rays showing various manifestations of tuberculosis.
DOI: 10.6084/m9.figshare.19849009.v2
title: EEG data set

description:   PARAMETERS OF THE EXPERIMENT <br>
   
<br>
  Time interval of background EEG recording : 120 sec 
  Time interval of each visual stimuli presentation : 60 sec 
  Time interval between visual stimuli presentations : 20 sec 
  Number of presented visual stimuli : 10 <br>
     Total duration of the experimental session : 920 sec 
  Location of EEG scalp electrodes :   International 10–20 system 
  EEG recording sampling rate :   250Hz 
  Considered EEG channels : Channels.dat file <br>
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DOI: 10.6084/m9.figshare.26531662.v2
title: De-identified datasets for migraine-CeAD study

description: Minimal, aggregate, de-identified datasets used for our primary outcomes, cumulative incidence, and propensity score density plots for our study examining the association between migraine and cervical artery dissection
DOI: 10.17632/m32fwbhx98
title: Research Data The Populist Ambivalence

description: Research Data from the article "The Populist Ambivalence. Presidents and Democracy in Latin America"
DOI: 10.6084/m9.figshare.24471787.v2
title: Data on pregnancy outcomes in patients with PCOS

description: Data on pregnancy outcomes in patients with PCOS undergoing their first FET treatment from Shenzhen Zhongshan Urology Hospital, Shenzhen, China.
DOI: 10.6084/m9.figshare.19345565.v1
title: NEST - DFAB, UMAR apartment occupancy

description: A list of occupancy levels for the different rooms of the two NEST units DFAB and UMAR. Since rooms in the two units are rented out on a monthly basis, the list contains the flag if the respective room was rented or not. More detailed information on occupancy is not available.
DOI: 10.6084/m9.figshare.20110514.v1
title: Supplemental Materials - Manuscript "Sex-specific Phenotypes in the Aging Mouse Heart and Consequences for Chronic Fibrosis" (Corrected 06/21/22)

description: <strong>Sex-specific Phenotypes in the Aging Mouse Heart and Consequences for Chronic Fibrosis</strong> Supplemental materials- Revised 05/23/22- Updated 06/21/22 <br> Funding: This work was supported by grants from National Institutes on Health [grant numbers AG059599 [KAC, MLE], P30 CA125123 [Mass Spectrometry Proteomics Core], CPRIT Core Facility Award [grant number RP170005, RP210227, Mass Spectrometry Proteomics Core], and the Medallion Foundation [KAC].
DOI: 10.25387/g3.28057373.v2
title: Supplemental Material for Landis <i>et al</i>., 2025

description: <i>Calochortus tolmiei </i>Hook. & Arn.<i>, </i>a bulbous monocot with cat’s ear flowers in the angiosperm family Liliaceae, is a perennial herb native to northern California, Oregon, and Washington. <i>Calochortus</i> exhibits substantial morphological and karyotype diversity with multiple floral forms and a haploid chromosome number varying from six to 10. Here, we present the first high-quality reference assembly in Liliaceae for <i>C. tolmiei</i>, with a scaffolded assembly of 2.9 Gbp with a N50 of 296 Mbp. Notably, 92% of the assembled genome is scaffolded into 10 pseudomolecules, matching the documented chromosome count of <i>C. tolmiei. </i>The genome contains 31,049 protein-coding genes, with 86.2% being functionally annotated. The closest reference-quality genome assembly to <i>C. tolmiei</i> is from <i>Chionographis japonica </i>(Willd.) Maxim. (Melianthiaceae), which diverged approximately 83 MYA, providing a valuable genomic resource in the Liliales, an order which lacks genomic resources.
DOI: 10.25381/cput.24032418.v1
title: Relationship-centered leadership and the effect on the performance of construction project teams at a construction site in Queenstown

description: Ethical ref #2021_FBMSREC 113The Research Method – Quantitative Technique<br>The quantitative method approach was used to achieve the dissertation’s aims. Quantitative research use numerical data where a researcher focuses on collecting data in the form of numbers to explain phenomena. This data is then used to analyse and provide findings and make recommendations based on the findings. The population to be studied is maintained, and controls and defined criteria are sometimes utilised to assess the validity of the findings. Because the study is extremely concentrated and there is a strong emphasis on the trustworthiness of the results, large numbers are utilised in the samples (Hoy & Adams, 2015:108). The most important element of qualitative research is that it is generally suited for samples, and its conclusions are neither quantitative nor quantifiable. Its primary benefit, which also serves as its primary distinction from quantitative research, is that it provides a comprehensive description and analysis of a study topic, without limiting the scope of the study or the nature of participant’s responses (Edwards, 2010:55).<br>
DOI: 10.6084/m9.figshare.11604597.v1
title: A gold standard for polarity of emotions of software developers in GitHub

description: Manually annotated gold standard for emotion polarity. The dataset contains over 7,000 documents including GitHub pull request and commit comments. <br>Please, cite the following paper if you wish to use this dataset for your own research: N. Novielli, F. Calefato, D. Dongiovanni, D. Girardi, F. Lanubile (2020). 'Can We Use SE-specific Sentiment Analysis Tools in a Cross-Platform Setting?'. In Proceedings of the 17th International Conference on Mining Software Repositories (MSR 2020). <br>
DOI: 10.6084/m9.figshare.1296151.v4
title: Data from: Molecular evolution and island colonisation

description: For details of the contents of the fileset, please see the README file.
DOI: 10.6084/m9.figshare.13079240.v1
title: Red Sea mid-Holocene highstand database

description: <b>Sample Locations and supplementary information: </b>Al-Mikhlafi et al.,2020 "Holocene relative sea-level changes and coastal evolution along the coastlines of Kamaran Island and As-Salif Peninsula, Yemen, southern Red Sea" <i>Quaternary Science Reviews</i><br><b><br></b><b>1. Elevation of the mid-Holocene highstand in the Red Sea</b>. Reported mid-Holocene elevations and ages compiled from: this study (Al-Mikhlafi et al.,2020); Friedman, 1965, Gvitman, 1992, 1994, Dullo and Montaggioni, 1995, 1998, Moustafa et al., 2000, Shaked et al., 2005, Hein et al., 2011. <br><br>All radiocarbon ages have been recalibrated using the latest calibration curve (Marine20, Heaton et al. 2020) and a consistent ΔR (Cember, 1989, Felis et al., 2004, Reimer and Reimer, 2020). For comparison, radiocarbon ages are also given using the Marine13 calibration curve (Reimer et al., 2013).<b><br></b><b>2. Sample locations for the sites investigated in this study.</b><br><b>3. Pdf of supplementary information</b>: Additional photographs and field sketches of sites investigated.<br>
DOI: 10.6084/m9.figshare.14931903.v1
title: RSF and RSI after thyroidectomy data

description: Reflux finding score (RFS) and reflux symptom index (RSI) before and after thyroidectomy<b></b>
DOI: 10.6084/m9.figshare.23574933.v1
title: Dataset: IgG subclasses in 157 referred hemochromatosis probands with <em>HFE</em> p.C282Y homozygosity

description: This dataset includes observations in 157 referred Alabama hemochromatosis probands with <em>HFE </em>p.C282Y homozygosity. These data were used to characterize IgG subclass levels and laboratory and clinical associations thereof and to compare with IgG subclass levels of eight previoiusly published adult cohorts unselected for hemochromatosis. The present cohort is a replicate of a non-overlapping cohort of 53 referred hemochromatosis probands with p.C282Y homozygosity in whom subnormal IgG subclass levels were reported in 2003.
DOI: 10.6084/m9.figshare.28917527.v1
title: CellMemory-BreastCancer-Xenium data

description: CellMemory-BreastCancer-Xenium data
DOI: 10.6084/m9.figshare.12744863.v1
title: Supplementary Material for: Blood Pressure Variability and Outcomes in End-Stage Renal Disease Patients on Dialysis: A Systematic Review and Meta-Analysis

description: <b><i>Objective:</i></b> Previous studies have suggested that blood pressure variability (BPV) is associated with an increased risk of mortality and cardiovascular events in patients on dialysis. However, the results are inconsistent. A comprehensive literature review was conducted to analyze the association between BPV and outcomes in patients on dialysis. <b><i>Methods:</i></b> Articles in Embase, Medline, and Web of Science from the date of inception through January 1, 2020, were identified. The outcomes were all-cause and cardiovascular mortality and cardiovascular events. The risk of bias was assessed using the Newcastle-Ottawa scale tool. Random effects models were used to pool the overall effect sizes. Two reviewers extracted the data independently. Meta-regression and subgroup analyses were performed to explore potential heterogeneity. <b><i>Results:</i></b> Fifteen eligible studies were included, and all enrolled hemodialysis recipients only. The overall risk of bias for the included studies was low. A 1-SD increase in systolic BPV was associated with higher risks of all-cause mortality (HR = 1.18; 95% CI 1.11–1.26, <i>I</i><sup>2</sup> = 53.8%), cardiovascular mortality (HR = 1.23; 95% CI 1.10–1.37,<i> I</i><sup>2</sup> = 57.2%), and cardiovascular events (HR = 1.27; 95% CI 1.07–1.51, <i>I</i><sup>2</sup> = 69.3%). Likewise, a 1-SD increase in diastolic BPV was associated with higher HR for all-cause and cardiovascular mortality (HR = 1.14; 95% CI 1.05–1.23, <i>I</i><sup>2</sup> = 0.0%, and HR = 1.14; 95% CI 0.94–1.38, <i>I</i><sup>2</sup> = 0.0%, respectively). <b><i>Conclusions:</i></b> A greater BPV is associated with higher risks of cardiovascular and mortality outcomes in patients on hemodialysis. Further research is required to determine whether BPV may be useful either as a marker enabling individualized treatment of cardiovascular risk or as a treatment target in its own right.
DOI: 10.6084/m9.figshare.25434382.v1
title: Sarcopenia prevalence and determinants

description: We have reported prevalence and determinants of sarcopenia among urban and rural populations from India
DOI: 10.6084/m9.figshare.20347299.v1
title: Appendix A

description: Figures and tables in 'Effectiveness of Chinese herbal medicine Zhi Shi Xiao Pi Wan on adult diabetic gastroparesis: a systematic review and meta-analysis'
DOI: 10.6084/m9.figshare.27932931.v1
title: Global wetland loss and impacts on carbon and methane emissions

description: Data A. Global wetland emissionsThis part includes annual trend of CH<sub>4</sub>, NEE and net GHG flux intensities, as well as annual total CH<sub>4</sub>, NEE and net GHG emissions from 1901 – 2020 in the Global wetland emissionsData B. Trade-offs of wetland conversionThis part includes the changes of global emissions between scenarios with transient and constant wetland cover from 1901 to 2020. The annual changes of wetland CH<sub>4</sub> emissions and NEE, GHG emissions from converted wetlands, and the changes of net GHG are in the ‘The changes of global emissions due to wetland loss.Data C. Climate change impactsThis part includes the climate-driven GHG emission changes from wetlands from 1901 to 2020. The annual changes in emissions and intensities of wetland CH<sub>4 </sub>and NEE, rice CH<sub>4</sub>, and net GHG from wetlands are in the ‘Climate driven GHG emission changes.Data D. Four scenarios GHG emissionsThis part includes the wetland CH<sub>4</sub> and NEE, and GHG emissions from converted wetlands from 1901 to 2020 under four scenarios’ simulations.
DOI: 10.6084/m9.figshare.28465994.v1
title: Bond Strength of Concrete

description: Bond dataset
DOI: 10.17632/pcyj38hp2z
title: ERCC6L2 mitigates replication stress and promotes centromere stability

description: Source data files
DOI: 10.6084/m9.figshare.18154715.v1
title: An enhanced battery materials database auto-generated using ChemDataExtractor and further classified using the BatteryBERT language model.

description: An enhanced battery materials database auto-generated using ChemDataExtractor and further classified using the BatteryBERT language model. <br> Two battery material databases are included: <br> (1) a new battery property database v2.0 that contains 210,416 data about battery materials and five of its key properties: capacity, voltage, conductivity, Coulombic efficiency and energy. This database supersedes v1.0 (Huang, S. & Cole, J. M. A database of battery materials autogenerated using ChemDataExtractor. <em>figshare</em> https://doi.org/10.6084/m9.figshare.11888115.v2 (2020)) owing to its: (i) enhancement of data from the last two years (2020 and 2021) as well as from papers belonging to Springer journals; (ii) filtering off of non-relevant data from non-battery papers that has been made possible via our implementation of a binary classification model. <br> (2) A device-classified database that contains 300,622 anode, cathode or electrolyte materials that have been classified using our BatteryBERT language model. <br> Both databases have been provided in JSON, SQL, and CSV format.<br>
DOI: 10.6084/m9.figshare.24871338.v1
title: Condensin-mediated restriction of retrotransposable elements facilitates brain development in Drosophila melanogaster.

description: This is the source data for the manuscript. Each tab contains the raw data values used to make the charts in Graphpad Prism that are depicted for each of the figures.
DOI: 10.6084/m9.figshare.28189253.v2
title: Data for Population Dynamics, Diversity, and Environmental Influences on Citrus Fruit Borers During Dry Season in Three Citrus Varieties of Malang District, Indonesia

description: Malang district is one of the centra production of citrus in Indonesia. The most common variety of citrus in Malang are Keprok Batu 55, Siam Madu, and Baby Java. The production of these native citrus variety has major problem due to fruit borers. Fruit borers caused premature fruit drop up to 80% in citrus orhards. This research shows the difference species of fruit borers infesting three citrus variety in Malang. <i>Bactrocera dorsalis</i>, <i>B. carambolae</i>, <i>Drosophila melanogaster</i>, and <i>Atherigona orientalis</i> were found infesting Keprok Batu 55, Siam Madu, and Baby Java citrus. However, two species of fruit borers, <i>Zaprionus bogoriensis </i>and <i>Prays endocarpa </i>were only infesting Baby Java citrus. <i>B. dorsalis </i>was the most dominant species in Siam Madu (53.84%) and Keprok Batu 55 (42.95%). In Baby Java citrus, <i>A. orientalis </i>was the most dominant species (36.52%). The preference of citrus fruit borers to citrus variety was affecting the species composition. Siam Madu citrus was the most damaged citrus variety but Baby Java citrus has the highest diversity of fruit borers species. The population of fruit borers species were also affected by environmental variables. Citrus fruit borers seemed to be affected primarily by the temperature and wind speed.
DOI: 10.17632/2g36672s5f
title: Binary-Classification Performance-Metrics Benchmarking Data

description: This data provides the detailed test results of the benchmarking for the binary-classification performance metrics. The benchmark comprising three stages was applied on 13 metrics namely True Positive Rate, True Negative Rate, Positive Predictive Value, Negative Predictive Value, Accuracy, Informedness, Markedness, Balanced Accuracy, G, Normalized Mutual Information, F1, Cohen’s Kappa, and Mathew’s Correlation Coefficient (MCC). The new benchmarking method is described in Gürol Canbek, Tugba Taskaya Temizel, and Seref Sagiroglu, "BenchMetrics: A Systematic Benchmarking Method for Binary-Classification Performance Metrics", Neural Computing and Applications, 2020 (Submitted). The related benchmarking API and an interactive ready-to-run experimentation platform is available online (see the references)
DOI: 10.25420/britishmuseum.28660088.v1
title: ELAN Annotation extension II

description: File for ELAN Annotation of the production process of Urhobo rope and broom
DOI: 10.6084/m9.figshare.14627280.v1
title: Database WCS in female soccer

description: Database female soccer by contextual factors