cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25386/genetics.14593902
title: Supplemental Material for Christesen et al., 2021

description: nAChRs are the most abundant excitatory receptors in the insect brain, yet relatively little is known about their roles in neurological pathways. Here, we describe the pleiotropic consequences associated with deletion of the <i>Db1</i> nAChR subunit. Using somatic CRISPR-Cas9 editing, we show that deletion of <i>Db1</i> specifically in CCAP neurons impairs wing expansion and this is associated with disruption of signalling by the hormone <i>bursicon</i>. <i>Db1</i> is a commercial insecticide target, and the fitness costs identified explain the scarcity of resistant mutants in field populations, whilst also providing insight into pathways potentially affected by chronic low-dose exposure in beneficial species.
DOI: 10.25386/genetics.14593902.v1
title: Supplemental Material for Christesen et al., 2021

description: nAChRs are the most abundant excitatory receptors in the insect brain, yet relatively little is known about their roles in neurological pathways. Here, we describe the pleiotropic consequences associated with deletion of the <i>Db1</i> nAChR subunit. Using somatic CRISPR-Cas9 editing, we show that deletion of <i>Db1</i> specifically in CCAP neurons impairs wing expansion and this is associated with disruption of signalling by the hormone <i>bursicon</i>. <i>Db1</i> is a commercial insecticide target, and the fitness costs identified explain the scarcity of resistant mutants in field populations, whilst also providing insight into pathways potentially affected by chronic low-dose exposure in beneficial species.
DOI: 10.15468/s3gxjt
title: Seven new species of Chimarra (Trichoptera: Philopotamidae) from Malawi

description: This dataset contains the digitized treatments in Plazi based on the original journal article Wahlberg, Emma, Espeland, Marianne, Johanson, Kjell Arne (2014): Seven new species of Chimarra (Trichoptera: Philopotamidae) from Malawi. Zootaxa 3796 (3): 579-593, DOI: http://dx.doi.org/10.11646/zootaxa.3796.3.10
DOI: 10.5281/zenodo.5080965
title: Pendellösung Interferometry Probes the Neutron Charge Radius, Lattice Dynamics, and Fifth Forces

description: Data from manuscript entitled: "Pendellosung Interferometry Probes the Neutron Charge Radius, Lattice Dynamics, and Fifth Forces" arXiv:2103.05428
DOI: 10.5281/zenodo.5080964
title: Pendellösung Interferometry Probes the Neutron Charge Radius, Lattice Dynamics, and Fifth Forces

description: Data from manuscript entitled: "Pendellosung Interferometry Probes the Neutron Charge Radius, Lattice Dynamics, and Fifth Forces" arXiv:2103.05428
DOI: 10.11571/upei-roblib-data/researchdata:667
title: Longevity of print book use at a small public university: a 30-year longitudinal study - two supporting data sets
DOI: 10.6073/pasta/3aeaceb707175aa0368ff17966030be5
title: Tree Ring Data from the Lyford Mapped Tree Plot at Harvard Forest 1861-2014

description: Is it possible to reconstruct aboveground carbon/biomass from tree rings? If so, how far back in time can researchers go when using tree-ring data in the reconstruction of past biomass? Answers to these questions will have a significant impact on our understanding of dynamics in the terrestrial carbon sink. Long tree-ring records of biomass can reveal intra-annual to annual to multidecadal variations that cannot be resolved by forest census data that is not conducted annually. Additionally, while these dynamics might be resolved using remote sensing, most remotely-sensed products are only two decades or less in length. By having long records of carbon biomass, we can then identify not only the dominant drivers of biomass, but how the importance of these drivers might change during different eras as environmental factors change (e.g., climate, air pollution, disturbance). To test these and other questions, we collected tree-ring records from three 20m radius plots set within the Lyford Plot at the Harvard Forest. The Lyford Plot has been remeasured, on average, decadally since 1969. We can convert these data to biomass using allometric equations and compare tree-ring inferred aboveground biomass to the census data going back in time. Dye et al. (2016) have shown that these data fall within the range of uncertainty of census data sampled in similar plots going back to 1969. Dye, A., Barker Plotkin, A., Bishop, D., Pederson, N., Poulter, B. and Hessl, A., 2016. Comparing tree‐ring and permanent plot estimates of aboveground net primary production in three eastern US forests. Ecosphere, 7(9).
DOI: 10.17037/data.00002271
title: Codelists for: "Understanding thresholds of blood pressure and predicted cardiovascular disease risk in guiding blood pressure treatment: a cohort study in English primary care"

description: A set of codelists that cover cardiovascular disease and target organ damage, including heart failure, chronic kidney disease and haemorrhagic stroke.
DOI: 10.6073/pasta/5b25d63c417a0dccb77947c0c1866655
title: Natural Land Zones in New England in 2006 from 2010 Wildlands and Woodlands Report

description: This GIS dataset shows different Wildland and Woodland zones in New England and is intended to illustrate how the percentage of protected land could vary between New England landscapes while achieving the total acreage goals as expressed in the Wildlands and Woodlands 2010 Report. This is layer is intended to be conceptual and not prescriptive. The zones were created by expressing the percent natural landcover for a given 500m pixel using a 25 x 25-cell neighborhood. The landuse categories considered to be natural and the breakpoints for each zone are given in the Methods section of this document. The data are provided in vector format as an ESRI shapefile. The projection is NAD 1983 Albers. The Wildlands and Woodlands webpage, http://www.wildlandsandwoodlands.org/, includes a downloadable high-resolution copy of the report and an extensive set of resources that complement and support the arguments and facts presented in it. These include citations, metadata, and downloadable high-quality images of all the graphs and maps. The website will be updated to provide further information on many of the findings, activities, and recommendations provided in the report. Wildlands and Woodlands Report: Foster, D. R., Lambert, K. F., Kittredge, D. B., Donahue, B. M, Hart, C. M., Labich, W. G., Meyer, S., Thompson, J. , Buchanan, M., Levitt, J. N., Pershel, R., Ross, K., Elkins, G., Daigle, C., Hall, B., Faison, E. K., D'Amato, A. W., Forman, R. T. T., Del Tredici, P., Irland, L. C., Colburn, B. A., Orwig, D. A., Aber, J. D., Berger, A., Driscoll, C. T., Keeton, W. S., Lilieholm, R. J., Pederson, N., Ellison, A. M., Hunter, M. L., Fahey, T. J. 2017. Wildlands and Woodlands, Farmlands and Communities: Broadening the Vision for New England.
DOI: 10.18430/m37km7
title: X-ray diffraction data for the crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor SDDC-0001914, tetragonal crystal from (7KM7)
DOI: 10.18430/m37ki8
title: X-ray diffraction data for the crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor SDDC-0001580 (7KI8)
DOI: 10.18430/m37ki9
title: X-ray diffraction data for the crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor SDDC-0001912 (7KI9)
DOI: 10.18430/m37km9
title: X-ray diffraction data for the crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor SDDC-0001913, tetragonal crystal from (7KM9)
DOI: 10.18430/m37km8
title: X-ray diffraction data for the crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor SDDC-0001914, orthorhombic crystal from (7KM8)
DOI: 10.6073/pasta/df2d6bb312619a597aaab35b997a0da6
title: Land Zones in New England 1940-2070 from 2017 Wildlands and Woodlands Report

description: This dataset contains two GIS datalayers, one CSV file and an associated R script used to produce figures for the 2017 Wildlands and Woodlands report. The “wedge diagram” data (HF360-01-landcover-data.csv) shows actual percent landcover estimates across New England from 1940 to 2010 and straight-line trends needed between 2010 to 2070 to reach the Wildlands and Woodland vision by 2060. The published diagram can be seen in figure 1 of the 2017 Wildlands and Woodland report. In hf360-03-community-forests.zip, the GIS layer shows towns that contain community forests as determined by the authors of the report. In hf360-04-wildland-woodland-zones.zip, the GIS layer shows Wildland and Woodland Zones as illustrated in the report. It was created by starting with the Wildland and Woodland zones from the 2010 report and adding in areas with high agricultural land use. These types are meant to be conceptual and not prescriptive. Wildlands and Woodlands Report: Foster, D. R., Lambert, K. F., Kittredge, D. B., Donahue, B. M, Hart, C. M., Labich, W. G., Meyer, S., Thompson, J. , Buchanan, M., Levitt, J. N., Pershel, R., Ross, K., Elkins, G., Daigle, C., Hall, B., Faison, E. K., D'Amato, A. W., Forman, R. T. T., Del Tredici, P., Irland, L. C., Colburn, B. A., Orwig, D. A., Aber, J. D., Berger, A., Driscoll, C. T., Keeton, W. S., Lilieholm, R. J., Pederson, N., Ellison, A. M., Hunter, M. L., Fahey, T. J. 2017. Wildlands and Woodlands, Farmlands and Communities: Broadening the Vision for New England.
DOI: 10.5281/zenodo.5082267
title: Raw data for: Frequency-comb-calibrated swept-wavelength interferometry

description: This document includes the raw data and Matlab codes to obtain the figures included in the paper, 'Frequency-comb-calibrated swept-wavelength interferometry'.
DOI: 10.5281/zenodo.5082266
title: Raw data for: Frequency-comb-calibrated swept-wavelength interferometry

description: This document includes the raw data and Matlab codes to obtain the figures included in the paper, 'Frequency-comb-calibrated swept-wavelength interferometry'.
DOI: 10.5281/zenodo.5082951
title: Data for "Association of lightning occurrence with precipitation cloud column structure at a fixed position"

description: Here are the data for the paper titled "Association of lightning occurrence with precipitation cloud column structure at a fixed position" and submitted to Atmospheric Research. The abstract is as follow. A grid-based lightning activity diagnosis method that has been rarely involved in previous studies is needed for fine-grid lightning early warning and forecast systems for meteorological applications. In this study, a C-band frequency-modulated continuous-wave (C-FMCW) radar, with its feature of vertical detection, was combined with lightning discharge recordings within a 3 km range to investigate the dependence of lightning occurrence on the structure of precipitation cloud columns (PCCs) from the perspective of a fixed position, which is similar to a spatial grid. The results show that, relative to PCCs without lightning, PCCs with lightning exhibit greater maximum reflectivity, reflectivity at different temperature layers, maximum upward radial velocity, maximum velocity spectrum width, cloud top height, and vertically integrated liquid in terms of their average values, and wider-range distributions of these parameters. Thus, with the introduction of the Light Gradient Boosting Machine algorithm, a lightning diagnosis program that integrates multiple C-FMCW radar parameters was developed. Its hit rate of lightning occurrence is 93.5% and it has a threat score of 0.421. Further, the results suggest that the maximum velocity spectrum width above the 0 °C isotherm is the most effective in distinguishing PCCs with or without lightning. In accordance with these findings, polarimetric radar data above the position of C-FMCW radar revealed that the hydrometeor properties of PCCs may play a more important role than convection intensity in determining the presence or absence of lightning at a specific location.
DOI: 10.6073/pasta/88990bfa46987a806d257cf50c8dbfeb
title: Nonstructural Carbon, Phenology and Wood Formation in Three Tree Species at Harvard Forest 2017-2019

description: This data set comprises various observations and measurements across the 2017 to 2019 growing season for seven red maple (Acer rubrum), eight red oak (Quercus rubra), and six white pine (Pinus strobus) in the Prospect Hill Tract of Harvard Forest. The observations include spring and fall leaf phenology and basic allometry, such as diameter at breast height and height. For the leaf phenology, we followed the protocol from John O’Keefe (HF003). Measurements include wood growth data from weekly microcores and a three time characterisation of growing season nonstructural carbon concentrations (soluble sugars and starch) for stems and leaves. Additionally, stem CO2 efflux was measured once a month for the 2018 growing season and weekly for the 2019 growing season.
DOI: 10.15468/wgr3k3
title: A revision of Rhodomantis Giglio-Tos, 1917 (Mantodea: Mantidae: Mantinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Milledge, Graham A. (2014): A revision of Rhodomantis Giglio-Tos, 1917 (Mantodea: Mantidae: Mantinae). Zootaxa 3797 (1): 39-64, DOI: http://dx.doi.org/10.11646/zootaxa.3797.1.7
DOI: 10.5281/zenodo.5083154
title: Data and code for analysis in preprint "Fighting over defence chemicals disrupts mating behaviour"

description: Data and code for analysis in bioRxiv preprint "Fighting over defence chemicals disrupts mating behaviour". The point at which each data sheet is used in the analysis is specified in the code and code for each respective figure in paper is also given. A renv lockfile is also included for version control.
description: Notes on new version: Whilst carrying out a re-analysis we checked for variation in age between treatments and found that it did vary significantly (F=18.79, df=4,62, p&lt;0.001) for females in the ♀(S)C+♂C- treatment, where females were younger than average, and borderline significantly (F=6.89, df=3,52, p=0.075) for females in the ♀C-♂C+ treatment, where females were slightly older than average. Despite the effects of age likely being negligible due to refrigeration* and isolation of each individual (meaning that age was not related to social experience), especially in comparison to treatment effects, potential confounding effects could not be completely ruled out and so we have now dropped the ♀(S)C+♂C- treatment from the analysis and removed the four oldest females from the ♀C-♂C+ treatment. The age of both females and males now does not significantly differ across treatments (female age: F = 1.05, df = 3, 48, p = 0.79; male age: F = 0.56, df = 3, 48, p = 0.643). *At room temperature, adults can live up to 20 days (Bandeili & Müller 2010). We added this information in the method section (line 128-132). When kept only at 5 °C the lifespan expands up to 3 months and their metabolism is strongly reduced. As individuals were kept until the preparation for the bioassays in the fridge (i.e. at 5 °C), we assume that age differences should be negligible.
DOI: 10.6073/pasta/f78da17f56c4f013795c2c01c4c804a1
title: Academics for Land Protection in New England (ALPINE) GIS Data since 2015

description: Academics for Land Protection in New England (ALPINE) is a network of academic institutions committed to increasing the pace of land protection in New England to address the region’s environmental challenges and to support nature and people. ALPINE seeks to expand the role that academic institutions play in conserving the New England landscape by sharing experiences and resources among faculty and staff, students, administrations, and alumni. This dataset contains point locations of colleges that are participants in ALPINE and parcels of natural land owned by participating schools who submitted data to the ALPINE coordinator.
DOI: 10.18430/m36m75
title: X-ray diffraction data for the c-Myc DNA binding protein complex (6M75)
DOI: 10.18430/m37btj
title: X-ray diffraction data for the crystal structure of Pennisetum glaucum monodehydroascorbate reductase (7BTJ)
DOI: 10.18430/m37buz
title: X-ray diffraction data for the crystal structure of Pennisetum glaucum monodehydroascorbate reductase (7BUZ)
DOI: 10.5517/ccdc.csd.cc270m74
title: CCDC 2056175: Experimental Crystal Structure Determination

description: Related Article: Shou Yuan, QiKun Sun, Yaguang Wang, Lingtai Yue, Jie Ma, Yuefa Zhang, Haichang Zhang, Shanfeng Xue, Wenjun Yang|2021|J.Mater.Chem.C|9|8302|doi:10.1039/D1TC01744F
DOI: 10.5517/ccdc.csd.cc270m85
title: CCDC 2056176: Experimental Crystal Structure Determination

description: Related Article: Shou Yuan, QiKun Sun, Yaguang Wang, Lingtai Yue, Jie Ma, Yuefa Zhang, Haichang Zhang, Shanfeng Xue, Wenjun Yang|2021|J.Mater.Chem.C|9|8302|doi:10.1039/D1TC01744F
DOI: 10.6073/pasta/a4dec9cb8718cb32fb7605d7e7d7a995
title: Coastal Native American Archaeological Sites in New York and Southern New England 12000-400 BP

description: Information on coastal Native American archaeological sites in New York and southern New England was compiled from various state historical commissions. The data include the following characteristics: Project Area, Project Size, and Cultural Remains, which identifies the presence of either pre-Contact (PRE) or historic (HI) material, or the lack of cultural material (NCM). Site type Site Type delineates the type of pre-Contact site represented by the artifacts and features identified at a location, which ranges from a Find Spot (FS) (a tool or piece of chipping debris found on the surface or found alone), and a Short-term Site (ST) (presence of artifacts indicating temporary use of a location), to a Seasonal Site (SE) (a site containing evidence of repeated occupation over long periods of time and with features and evidence for a broad range of activities), and a Sedentary Site (SD) (evidence of year-round habitation in form of botanical, faunal, fish and shellfish remains; presence of hearths, storage pits and middens; large variety and great quantity of tool types). Time periods Time Periods include: the Paleoindian Period (P) (12,000-10,000 BP); Early Archaic (EA) (10,000-8000 BP), Middle Archaic (MA) (8000-6000 BP), Late Archaic (LA) (6000-3000 BP), Transitional Archaic (TA) (3500-2500 BP), Early Woodland (EW) (3000-2000 BP), Middle Woodland (MW) (2000-1000 BP), Late Woodland (LW) (1000-500 BP), Contact period (C) (A.D. 1500-1620), and sites of unknown temporal affiliation (U). Activities The activities represented by the artifacts recovered from the sites include: lithic tool repair (LTR) (chipping debris), lithic workshop (LTW) (chipping debris, hammerstones, cores), hunting (HU) (faunal material and/or projectile points), fishing (FI) (net weights, fish hooks, fish bone), shellfish gathering (SG) (presence of shell), plant gathering (PG) (presence of charred seeds and/or nuts), food processing (FP) (bifaces, scrapers, knives, blades, and other lithic tools, fauna, shellfish, botanical remains), cooking (CK) (hearth, steatite, fire-cracked rock [fcr], burnt faunal and botanical remains, pottery), storage (ST) (pottery, pit feature, steatite), disposal (DI) (midden, pit feature), horticulture (HO) (maize, hoes), burial (BU), and ceremonial (CE) (presence of exotic items, pendants, decorative artifacts). Locations The locations of the archaeological excavations on file at the Massachusetts, Rhode Island, Connecticut, and New York State Historical commissions were mapped onto digital United States Geological Survey (USGS) Quadrangle maps. Linking these locations to individual site characteristics can show change or patterns both through time and synchronically in how pre-Contact groups utilized the coastal southeastern New England and Long Island, New York landscape. NOTE: To protect the integrity of archaeological sites, only site towns are provided; no specific geographic coordinates are given.
DOI: 10.15468/j6u8bk
title: A revision of Apteromantis (Mantodea: Mantidae, Amelinae): A comprehensive approach to manage old taxonomic and conservation problems

description: This dataset contains the digitized treatments in Plazi based on the original journal article Battiston, Roberto, Ortego, Joaquín, Correas, José R., Cordero, Pedro J. (2014): A revision of Apteromantis (Mantodea: Mantidae, Amelinae): A comprehensive approach to manage old taxonomic and conservation problems. Zootaxa 3797 (1): 65-77, DOI: http://dx.doi.org/10.11646/zootaxa.3797.1.8
DOI: 10.6073/pasta/5b369875ae3f8b0aedaf495cf60a4240
title: Historical and Ecological GIS Data from Manuel F. Correllus State Forest on Martha’s Vineyard 1830-1994

description: Sand-plain ecosystems are a priority for conservation because they are uncommon, support numerous rare or uncommon plant and animal species, serve as groundwater recharge areas, and are threatened by land development. The 5,200-acre Manuel F. Correllus State Forest, in the central part of Martha’s Vineyard, is part of one of the larger sand-plain ecosystems in New England. This GIS data package was created as part of a study on the history and ecology of Martha’s Vineyard and the state forest as part of an effort to understand sandplain landscapes and make management recommendations for their maintenance.
DOI: 10.15468/ymb6tm
title: A case of the higher-level classification of praying mantises (Mantodea) obscuring the synonymy of Majangella Giglio-Tos, 1915 (Liturgusidae, Liturgusinae) and Ephippiomantis Werner, 1922 (Hymenopodidae, Acromantinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Svenson, Gavin J., Vollmer, William (2014): A case of the higher-level classification of praying mantises (Mantodea) obscuring the synonymy of Majangella Giglio-Tos, 1915 (Liturgusidae, Liturgusinae) and Ephippiomantis Werner, 1922 (Hymenopodidae, Acromantinae). Zootaxa 3797 (1): 103-119, DOI: http://dx.doi.org/10.11646/zootaxa.3797.1.10
DOI: 10.6073/pasta/a3fbc59e5a2c0683273b1bddddfe690a
title: Spectral Vegetation Indices from Harmonized Landsat and Sentinel-2 Data for Harvard Forest 2015-2020

description: The goal of this work is to exploit time series of remotely sensed data sets with ground observations to improve our understanding of how seasonal variation in canopy and environmental conditions affect the relationship between vegetation indices and leaf area index (LAI) and fraction of absorbed photosynthetically active radiation (fAPAR). Using three different common vegetation indices (EVI2, NDVI, NIRV), we can estimate LAI, fAPAR, and daily absorbed photosynthetically active radiation (APAR) using a semi-empirical model.
DOI: 10.6073/pasta/f89e91765910fc21f7ede52e495b54a0
title: Forest Type Maps for New England from Historical Studies 1912-1956

description: This data package contains 3 GIS layers showing generalized forest types across New England as delineated in older forestry publications. These were digitized so that they can be used to illustrate broad vegetation patterns across the region in modern publications. These GIS layers include maps drawn by Hawley and Hawes (1912), RT Fisher (1933), and Westveld and the Committee on Silviculture, New England Section, Society of American Foresters (1956).
DOI: 10.25375/uct.14900361
title: Physical and mechanical results for sea ice data - SCALE Winter Cruise 2019, SA Agulhas II

description: Physical and mechanical sea ice properties collected in the Antarctic marginal ice zone along the Good Hope Line by means of vertical ice cores extracted from solitary pancake ice floes and from consolidated pack ice during the SCALE Winter Cruise 2019 aboard the SA Agulhas II.
DOI: 10.25375/uct.14900361.v1
title: Physical and mechanical results for sea ice data - SCALE Winter Cruise 2019, SA Agulhas II

description: Physical and mechanical sea ice properties collected in the Antarctic marginal ice zone along the Good Hope Line by means of vertical ice cores extracted from solitary pancake ice floes and from consolidated pack ice during the SCALE Winter Cruise 2019 aboard the SA Agulhas II.