cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21679199.v1
title: Clinical methods of dynamic and quantitative evaluation of the shoulder and scapula complex: a scoping review

description: ABSTRACT The shoulder joint has the greatest range of motion and is the most susceptible to dysfunction. Dynamic and quantitative evaluations of this region provide better information for the clinic but the choice of the method depends on its measurement properties. This study aimed to identify the existing methods of quantitative dynamic evaluation of the shoulder and scapula complex, in a clinical context for the general population, identifying the measurement properties and outcomes of each method. The scoping review included in vivo studies, with samples without a specific clinical condition and involving applicable methods in a clinical context. We identified evaluated outcome, measurement method, and its measurement properties. We selected 29 studies that investigated 12 measurement methods, and evaluated their validity and reliability for 17 different outcomes. Most studies (n=21) addressed the position of the shoulder and the scapula and the derivative outcomes, using mainly the units of inertial measurement (n=5) and inertial magnetic measurement (n=6) as evaluation methods. The outcomes with valid and reliable methods were: shoulder joint range; scapula and shoulder motion range; muscle activity; shoulder joint center; humerus length; torque-time curve; functional performance; scapular dyskinesia; external shoulder rotators force; shoulder joint functionality and range; initial scapular movement; scapula and shoulder position; and shoulder angular velocity.
DOI: 10.6084/m9.figshare.21744278
title: THE IMPACT OF COVID-19 ON THE PROFILE OF MOTORCYCLE ACCIDENTS ATTENDED AT A TERTIARY HOSPITAL IN CAMPINAS

description: ABSTRACT Traffic-accidents are a public health problem with repercussions on population morbimortality. Objective: To analyze the impact of the pandemic on the profile of motorcycle accidents assisted at the Tertiary Hospital in 2020. Methods: Cross-sectional, descriptive retrospective study in 2017 and 2020 of 260 medical records of care for motorcycle accidents in the emergency room of the Tertiary Hospital. Statistical analysis of data and their correlations using the chi-square test (p &lt; 0.05). Results: Of the 105 medical records in 2017, 83% are men, mean age 29.8 years, and death rate of 3.90%. Fractures in 98.10%, 64.10% exposed and predominantly the tibia (61.90%). Of the 155 medical records in 2020, 91.61% are men, mean age 31.21 years, and no deaths. Fractures in 94.84%, 37.42% exposed and predominantly the tibia (28.57%). Between 2017 and 2020, Infosiga-SP showed a relevant reduction (p &lt; 0.001) of deaths in the hospital environment (52.46% to 31.91%). Conclusion: The incidence of motorcycle accidents increased, in-hospital deaths dropped, but the epidemiological profile of accidents at the Hospital remained unchanged. Level of Evidence III, Comparative Retrospective Study.
DOI: 10.6084/m9.figshare.21744278.v1
title: THE IMPACT OF COVID-19 ON THE PROFILE OF MOTORCYCLE ACCIDENTS ATTENDED AT A TERTIARY HOSPITAL IN CAMPINAS

description: ABSTRACT Traffic-accidents are a public health problem with repercussions on population morbimortality. Objective: To analyze the impact of the pandemic on the profile of motorcycle accidents assisted at the Tertiary Hospital in 2020. Methods: Cross-sectional, descriptive retrospective study in 2017 and 2020 of 260 medical records of care for motorcycle accidents in the emergency room of the Tertiary Hospital. Statistical analysis of data and their correlations using the chi-square test (p &lt; 0.05). Results: Of the 105 medical records in 2017, 83% are men, mean age 29.8 years, and death rate of 3.90%. Fractures in 98.10%, 64.10% exposed and predominantly the tibia (61.90%). Of the 155 medical records in 2020, 91.61% are men, mean age 31.21 years, and no deaths. Fractures in 94.84%, 37.42% exposed and predominantly the tibia (28.57%). Between 2017 and 2020, Infosiga-SP showed a relevant reduction (p &lt; 0.001) of deaths in the hospital environment (52.46% to 31.91%). Conclusion: The incidence of motorcycle accidents increased, in-hospital deaths dropped, but the epidemiological profile of accidents at the Hospital remained unchanged. Level of Evidence III, Comparative Retrospective Study.
DOI: 10.6084/m9.figshare.21744280
title: SENTINEL-1 TIME SERIES ANALYSIS ON CENTRAL AMAZON FLOODS

description: Abstract This study aimed to analyze the dynamics of the flooded areas of the Sentinel 1-SAR time series in a section of the Central Amazon between September 26, 2016, and February 8, 2020. The total of images was 59 for each polarization. In addition, the study calculated the average ordinary flood line (ALOF) from the heights of the fluviometric rulers between the years 1967 to 2020 and compared it with the values present in the radar time series. The pre-processing of the Sentinel-1 time series in the VV and VH polarizations used the following methodological sequence: Apply Orbit File, Radiometric Calibration (σ0), Range-Doppler Terrain Correction, Speckle Filter, and conversion to decibels (dB). The previous analysis of the adaptive filters showed different results for the two polarizations, obtaining the best result for the VV polarization using the Frost filter with 3x3 and the VH polarization with the Lee filter 3x3. The extraction of water bodies and wetlands used a threshold value, making masks for the entire period. The most considerable extent of the floodable area occurred on June 17, 2019, with 6,611.86 km2, representing 16.42% of the SAR scene in the VH polarization and 6,443.19 km2, representing 16.10% of the SAR scene in the VV polarization. The relationship between the VH and VV wetlands to the ruler's height was satisfactory, with coefficients of determination (R2) of 0.79 in the VH polarization and of 0.64 in the VV polarization and a p-value less than 0.05.
DOI: 10.6084/m9.figshare.21744280.v1
title: SENTINEL-1 TIME SERIES ANALYSIS ON CENTRAL AMAZON FLOODS

description: Abstract This study aimed to analyze the dynamics of the flooded areas of the Sentinel 1-SAR time series in a section of the Central Amazon between September 26, 2016, and February 8, 2020. The total of images was 59 for each polarization. In addition, the study calculated the average ordinary flood line (ALOF) from the heights of the fluviometric rulers between the years 1967 to 2020 and compared it with the values present in the radar time series. The pre-processing of the Sentinel-1 time series in the VV and VH polarizations used the following methodological sequence: Apply Orbit File, Radiometric Calibration (σ0), Range-Doppler Terrain Correction, Speckle Filter, and conversion to decibels (dB). The previous analysis of the adaptive filters showed different results for the two polarizations, obtaining the best result for the VV polarization using the Frost filter with 3x3 and the VH polarization with the Lee filter 3x3. The extraction of water bodies and wetlands used a threshold value, making masks for the entire period. The most considerable extent of the floodable area occurred on June 17, 2019, with 6,611.86 km2, representing 16.42% of the SAR scene in the VH polarization and 6,443.19 km2, representing 16.10% of the SAR scene in the VV polarization. The relationship between the VH and VV wetlands to the ruler's height was satisfactory, with coefficients of determination (R2) of 0.79 in the VH polarization and of 0.64 in the VV polarization and a p-value less than 0.05.
DOI: 10.6084/m9.figshare.12925793.v5
title: The Rainforest Aboriginal people of the Wet Tropics region of Queensland (under development since 2008)

description: This is a description of the Rainforest Aboriginal people of the Wet Tropics region, inclusive of the Wet Tropics of Queensland World Heritage Area. It is under continuous review and development.
DOI: 10.5281/zenodo.6334743
title: KMCP Manuscript Data

description: # KMCP: accurate metagenomic profiling of both prokaryotic and viral populations by pseudo-mapping ## 1.code-and-documents This directory contains the source code, executable binaries, and documents of KMCP,<br> which are also hosted at Github: https://github.com/shenwei356/kmcp . Databases, usage, and tutorials of KMCP are also available at https://bioinf.shenwei.me/kmcp/. - [Installation](https://bioinf.shenwei.me/kmcp/download)<br> - [Databases](https://bioinf.shenwei.me/kmcp/database)<br> - Tutorials<br> - [Taxonomic profiling](https://bioinf.shenwei.me/kmcp/tutorial/profiling)<br> - [Sequence and genome searching](https://bioinf.shenwei.me/kmcp/tutorial/searching)<br> - [Usage](https://bioinf.shenwei.me/kmcp/usage)<br> - [Benchmarks](https://bioinf.shenwei.me/kmcp/benchmark)<br> - [FAQs](https://bioinf.shenwei.me/kmcp/faq) ## 2.databases This directory contains the building steps and reference genome accessions for<br> KMCP databases used in the manuscript. cami2 Databases used in benchmarks on CAMI2 mouse gut datasets<br> kmcp Databases used in other benchmarks<br> <br> ## 3.figures Each subdirectory contains steps to run the benchmark (`README.md`), steps for plotting (`README-plot.md`),<br> benchmark results, and figures.<br>
description: This work was supported by the National Natural Science Foundation of China [32000474 to W.S.]; by the China Postdoctoral Science Foundation [2021M700640 to W.S.]; and by the Chongqing Talents Project [cstc2021ycjh-bgzxm0150 to P.H.].
DOI: 10.5281/zenodo.6334744
title: KMCP Manuscript Data

description: # KMCP: accurate metagenomic profiling of both prokaryotic and viral populations by pseudo-mapping ## 1.code-and-documents This directory contains the source code, executable binaries, and documents of KMCP,<br> which are also hosted at Github: https://github.com/shenwei356/kmcp . Databases, usage, and tutorials of KMCP are also available at https://bioinf.shenwei.me/kmcp/. - [Installation](https://bioinf.shenwei.me/kmcp/download)<br> - [Databases](https://bioinf.shenwei.me/kmcp/database)<br> - Tutorials<br> - [Taxonomic profiling](https://bioinf.shenwei.me/kmcp/tutorial/profiling)<br> - [Sequence and genome searching](https://bioinf.shenwei.me/kmcp/tutorial/searching)<br> - [Usage](https://bioinf.shenwei.me/kmcp/usage)<br> - [Benchmarks](https://bioinf.shenwei.me/kmcp/benchmark)<br> - [FAQs](https://bioinf.shenwei.me/kmcp/faq) ## 2.databases This directory contains the building steps and reference genome accessions for<br> KMCP databases used in the manuscript. cami2 Databases used in benchmarks on CAMI2 mouse gut datasets<br> kmcp Databases used in other benchmarks<br> <br> ## 3.figures Each subdirectory contains steps to run the benchmark (`README.md`), steps for plotting (`README-plot.md`),<br> benchmark results, and figures.<br>
description: This research was funded by the National Natural Science Foundation of China (32000474 to Wei Shen), the China Postdoctoral Science Foundation (2021M700640 to Wei Shen), and the Chongqing Talents Project (cstc2021ycjh-bgzxm0150 to Peng Hu).
DOI: 10.5281/zenodo.6427838
title: KMCP Manuscript Data

description: # KMCP: accurate metagenomic profiling of both prokaryotic and viral populations by pseudo-mapping ## 1.code-and-documents This directory contains the source code, executable binaries, and documents of KMCP,<br> which are also hosted at Github: https://github.com/shenwei356/kmcp . Databases, usage, and tutorials of KMCP are also available at https://bioinf.shenwei.me/kmcp/. - [Installation](https://bioinf.shenwei.me/kmcp/download)<br> - [Databases](https://bioinf.shenwei.me/kmcp/database)<br> - Tutorials<br> - [Taxonomic profiling](https://bioinf.shenwei.me/kmcp/tutorial/profiling)<br> - [Sequence and genome searching](https://bioinf.shenwei.me/kmcp/tutorial/searching)<br> - [Usage](https://bioinf.shenwei.me/kmcp/usage)<br> - [Benchmarks](https://bioinf.shenwei.me/kmcp/benchmark)<br> - [FAQs](https://bioinf.shenwei.me/kmcp/faq) ## 2.databases This directory contains the building steps and reference genome accessions for<br> KMCP databases used in the manuscript. cami2 Databases used in benchmarks on CAMI2 mouse gut datasets<br> kmcp Databases used in other benchmarks<br> <br> ## 3.figures Each subdirectory contains steps to run the benchmark (`README.md`), steps for plotting (`README-plot.md`),<br> benchmark results, and figures.<br>
description: This work was supported by the National Natural Science Foundation of China [32000474 to W.S.]; by the China Postdoctoral Science Foundation [2021M700640 to W.S.]; and by the Chongqing Talents Project [cstc2021ycjh-bgzxm0150 to P.H.].
DOI: 10.5281/zenodo.7144333
title: KMCP Manuscript Data

description: # KMCP: accurate metagenomic profiling of both prokaryotic and viral populations by pseudo-mapping ## 1.code-and-documents This directory contains the source code, executable binaries, and documents of KMCP,<br> which are also hosted at Github: https://github.com/shenwei356/kmcp . Databases, usage, and tutorials of KMCP are also available at https://bioinf.shenwei.me/kmcp/. - [Installation](https://bioinf.shenwei.me/kmcp/download)<br> - [Databases](https://bioinf.shenwei.me/kmcp/database)<br> - Tutorials<br> - [Taxonomic profiling](https://bioinf.shenwei.me/kmcp/tutorial/profiling)<br> - [Sequence and genome searching](https://bioinf.shenwei.me/kmcp/tutorial/searching)<br> - [Usage](https://bioinf.shenwei.me/kmcp/usage)<br> - [Benchmarks](https://bioinf.shenwei.me/kmcp/benchmark)<br> - [FAQs](https://bioinf.shenwei.me/kmcp/faq) ## 2.databases This directory contains the building steps and reference genome accessions for<br> KMCP databases used in the manuscript. cami2 Databases used in benchmarks on CAMI2 mouse gut datasets<br> kmcp Databases used in other benchmarks<br> <br> ## 3.figures Each subdirectory contains steps to run the benchmark (`README.md`), steps for plotting (`README-plot.md`),<br> benchmark results, and figures.<br>
description: This work was supported by the National Natural Science Foundation of China [32000474 to W.S.]; by the China Postdoctoral Science Foundation [2021M700640 to W.S.]; and by the Chongqing Talents Project [cstc2021ycjh-bgzxm0150 to P.H.].
DOI: 10.6084/m9.figshare.12925793.v6
title: The Rainforest Aboriginal people of the Wet Tropics region of Queensland (under development since 2008)

description: This is a description of the Rainforest Aboriginal people of the Wet Tropics region, inclusive of the Wet Tropics of Queensland World Heritage Area. It is under continuous review and development.
DOI: 10.34740/kaggle/dsv/4734908
title: AutoXGB
DOI: 10.34740/kaggle/dsv/4734904
title: LUFlow Network Intrusion Detection Data Set
DOI: 10.17632/n6wrv4ry6v.7
title: Powerline Image Dataset (Infrared-IR and Visible Light-VL)

description: Despite a relatively crowded literature about detection of power lines for aircraft safety, the works are mostly optimized with very few training images; some even use artificially generated images. The IR imaging case is even less utilized. The reason is clearly the tremendous workload to obtain real images. With this demand in mind, the authors cooperated with the Turkish Electricity Transmission Company (TEIAS) to obtain video captures from actual aircrafts. Later, the authors made a thorough inspection over the video frames to isolate, capture and clean thousands of valuable images. In this content, 4000 IR and 4000 VL images are acquired and scaled to a size of 128x128. The IR folder contains 2000 IR images with power line and 2000 IR images with no power line. The VL folder contains 2000 VL images with power line and 2000 VL images with no power line. The IR and VL groups were deliberately constructed to contain both regular and especially confusing scenes. "TY" shows that there are no power lines in the images. "TV" shows that there are power lines in the images. The videos were captured from 21 different regions all over Turkey at different seasonal days. Due to varying background behavior, varying temperatures and weather conditions, and varying lighting conditions, the achieved positive set contains several difficult scenes where low contrast causes close-to invisibility for power lines. The original video resolutions were 576x325 for IR and full HD for VL, however, the captured frames were scaled down to smaller sizes and the effect of resizing was tested for various image sizes. An image size of 128x128 is sufficient for a consistently accurate power line recognition.
DOI: 10.5281/zenodo.4039774
title: Size, Mass and Density of Asteroids (SiMDA)

description: This data set contains 'best' values for the bulk density, the size (volume-equivalent diameter) and the mass of 428 small bodies (mainly asteroids) of our Solar System.
DOI: 10.5281/zenodo.6892062
title: Predicting peak daily maximum 8-hour ozone, and linkages to emissions and meteorology, in Southern California using machine learning methods

description: crestlinetop30ozone19902019.csv includes the data used to build the modes for the annual 30 highest MDA8 concentrations at the Crestline site.
DOI: 10.5281/zenodo.7194189
title: Dataset of Automatically Orchestrable GitHub Projects

description: This dataset accompanies the submission "Generating representative, live network traffic out of millions of code repositories" at HotNets'22: The 21st ACM Workshop on Hot Topics in Networks. Please see the files:<br> - `list_of_github_repositories.txt` for a list of GitHub repositories that we found containing a `docker-compose*.yml` file<br> - `list_of_executed_repositories.csv` for more detailed information on the success of capturing traffic with specific orchestration files found in ~67% of the repositories<br> <br> If you use our dataset, please cite our work as follows: Tobias Bühler, Roland Schmid, Sandro Lutz, and Laurent Vanbever.<br> 2022. Generating representative, live network traffic out of millions<br> of code repositories. In The 21st ACM Workshop on Hot Topics<br> in Networks (HotNets ’22), November 14–15, 2022, Austin, TX,<br> USA. ACM, New York, NY, USA, 7 pages. https://doi.org/10.1145/<br> 3563766.3564084
DOI: 10.6084/m9.figshare.21641597
title: Supplementary Material for: Renal-type clear cell carcinoma of the prostate: a rare case report

description: Occurrence of clear cell carcinoma of the prostate is exceedingly rare and presents a diagnostic dilemma. We describe a case of a 47-year- old male nonsmoker, who presented with a history of frequency dribbling urination and dysuria for six-months. In a digital rectal exam, enlarge prostate with a hard consistency was identified. All results for hematological and biochemical tests were normal. Also serum prostate-specific-antigen (PSA) level was 2.7 ng/ml (within normal range). Open prostatectomy was done and the result showed a 300 gr specimen and histopathology examination revealed clear cell carcinoma. Computerized tomography (CT) scan and ultrasound did not show any mass in kidneys but three nodules in both lungs in favor of metastasis were identified. Three months after surgery PET scan revealed hyperactivity in the abdominal wall, pelvic lymph nodes and lung fields in favor of metastasis thereafter systemic therapy with tyrosine kinase inhibitor was prescribed. To the best of our knowledge, clear cell carcinoma of the prostate has been reported very rarely.
DOI: 10.6084/m9.figshare.21679133
title: Supplementary Material for: Diagnosis and Management of Lemmel Syndrome: An Unusual Presentation and Literature Review

description: Lemmel syndrome is a rare clinical entity characterized by the presence of a periampullary duodenal diverticulum resulting in compression and dilatation of the pancreatic and common bile ducts, accompanied by obstructive jaundice. Gastric outlet obstruction is not a known complication of this syndrome, and there are no standardized approaches to its treatment. We present the first case of Lemmel syndrome presenting as gastric outlet obstruction and provide the results of a systematic literature review.
DOI: 10.6084/m9.figshare.21732086
title: Supplementary Material for: Preserflo Microshunt Surgery for Ocular Hypertension following Intravitreal Fluocinolone Acetonide Implant Removal: A Case Report

description: Diabetic macular edema (DME) is now a well-known condition for which a number of treatments have been shown to be effective. Intraocular corticosteroids are part of this therapeutic arsenal but are sometimes responsible for ocular hypertension. We describe here the case of a 60-year-old man with a history of bilateral DME who received an intravitreal injection of 190 µg fluocinolone acetonide (FAc) (ILUVIEN<sup>®</sup>, Alimera Sciences, Alpharetta, GA, USA) who presented a persistent ocular hypertension in one eye despite FAc removal by pars plana vitrectomy and was successfully managed by Preserflo<sup>®</sup> microshunt surgery.
DOI: 10.24381/cds.b25419f8
title: Methane data from 2002 to present derived from satellite observations
DOI: 10.25966/4v02-c391
title: CMS-Flux NBE 2020

description: Top-down Net biosphere exchange estimates between Jan 2010 and Dec 2018 constrained by column CO2 observations from Greenhouse gases Observing Satellite and Orbiting Carbon Observatory 2.

This dataset is openly shared in accordance with NASA Data and Information Policy (https://earthdata.nasa.gov/collaborate/open-data-services-and-software/data-information-policy).
DOI: 10.5255/ukda-sn-853334
title: New Zealand grid household electricity demand study 2014-2018
DOI: 10.5281/zenodo.6578574
title: CRM Variance Transport validation in E3SM-MMF - analysis code and condensed data

description: This tarball contains a collection of code and data used to performa a detailed analysis of the CRM variance transport feature added to E3SM-MMF. The data subset is condensed from the model output and observational datasets, so the ability to reproduce results directly is limited, but this archive mainly serves to document the methods used for our analysis.
DOI: 10.5281/zenodo.6968395
title: Demographic details, as well as questionnaire responses

description: Demographic details, as well as questionnaire responses
DOI: 10.5281/zenodo.7330443
title: Data and code for "Hotspots and drivers of compound marine heatwave and low net primary production extremes"

description: This repository provides the code and data for the study "Hotspots and drivers of compound marine heatwave and low net primary production extremes". All processed data required to produce the figures in this study are provided. However, not all raw data are provided, because of too large file sizes. For more information, please contact natacha.legrix@unibe.ch.
DOI: 10.5281/zenodo.7336857
title: In-depth study of the formation processes of single atmospheric particles in the southeastern margin of Tibetan Plateau

description: The Tibetan Plateau (TP) is the most sensitive and obvious indicator of climate change in the entire Asian continent, however, real-time observations on the characteristics of full aerosol compositions are still limited within the plateau, which hinders our comprehensively understanding of the distribution characteristics and formation mechanism of aerosols in high-altitude regions. In this study, a single particle aerosol mass spectrometer was deployed to investigate the highly time resolved chemical components and atmospheric processing on the size distribution and mixing state of individual particles in the southeastern margin of the TP during the pre-monsoon season.