cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5121454.v1
title: Supplementary Material for: Possible Association of <i>SLC22A2</i> Polymorphisms with Aspirin-Intolerant Asthma

description: <i>Background:</i> Aspirin-intolerant asthma (AIA) is a clinical syndrome characterized by acute bronchoconstriction following the ingestion of aspirin. Solute carrier family 22, member 2 (SLC22A2), also known as organic cation transporter 2 (OCT2), is predominantly expressed in the luminal membrane of airway epithelial cells and has been shown to mediate the transport of prostaglandins on the cyclooxygenase pathway which is regulated by aspirin blockage. Recently, SLC22A2-mediated uptake inhibition by several nonsteroidal anti-inflammatory drugs and decreased SLC22A2 transport activity by its genetic variants have been elucidated in asthma. <i>Methods:</i> To investigate the associations between AIA and genetic polymorphisms of the <i>SLC22A2</i> gene, 18 variants were genotyped in 163 AIA subjects and 429 aspirin-tolerant asthma (ATA) controls. Logistic analyses were used to evaluate p values for the associations of <i>SLC22A2</i> polymorphisms with AIA. <i>Results:</i> One common polymorphism in intron 5, i.e. <i>rs316021</i>, was significantly associated with susceptibility to AIA (p<i> = </i>0.004, <i>P</i><sup>corr</sup> <i>= </i>0.05, OR = 0.60, 95% CI = 0.43–0.85 in a codominant model). The minor allele frequency of <i>rs316021</i> in the AIA group was significantly lower than that in the ATA controls. In addition, a polymorphism in intron 4 <i>(rs3912161)</i> and a haplotype <i>(SLC22A2-ht3)</i> showed significantly stronger association signals with the FEV<sub>1</sub> fall rate induced by aspirin provocation in AIA subjects compared with ATA controls (p <i>= </i>0.004, <i>P</i><sup>corr</sup><i> = </i>0.05). <i>Conclusion:</i> Our findings suggest that <i>SLC22A2</i> could be a susceptibility gene for aspirin intolerance in asthmatics.
DOI: 10.6084/m9.figshare.13704796.v1
title: Near surface energy, specific humidity, and temperature changes from MERRA-2

description: The change in near-surface energy, specific humidity, and temperature changes from MERRA-2, including the temperature change that would have resulted had all energy been partitioned to temperature rather than specific humidity, calculated using Sen's slope. Units are J/kg/year for variables whose name includes _energy and degrees C per 35 years for variables whose name includes _t.
DOI: 10.6084/m9.figshare.5549356.v3
title: Social facilitation of laughter and smiles in preschool children: Dataset, analysis scripts and supporting materials.

description: The full dataset, analysis scripts and preprint from our study of social laughter in preschool children.<br><br>Abstract<br>======Surprisingly little is known about the social dimensions of laughter in preschool children. We studied children’s responses to amusing video clips in the presence or absence of peers. The sample consisted of 9 boys and 11 girls aged 31-49 months (M 39.8, SD 4.2) who watched three cartoons under three different conditions: individually, in pairs, or in groups of 6 or 8. The social viewing conditions showed significantly higher numbers of laughs and smiles than the individual viewing condition. On average children laughed eight times more in company as on their own and smiled almost three times as much. No differences were found between pairs and groups, and no association was found between subjective funniness ratings and group size. This suggests that the presence of even a single social partner can change behaviour in response to humorous material. It supports the idea that laughter and smiles are primarily flexible social signals rather than reflexive responses to humour.
DOI: 10.17632/228pwkw55h
title: Elemental analysis XRF of inks (1778-1825) 

description: This file contains raw data: the first sheet with spectra counts and a second sheet with ppm results of XRF analysis.
DOI: 10.17632/bvsyf6pbjz
title: SOCIAL DISTANCING AND THE CHANGING FACE OF EDUCATION — A STUDY ON THE STUDENTS AND EDUCATORS OF KOLKATA

description: Ensuring inclusive and equitable quality education and promoting life-long learning opportunities for all’ is one of the targets of sustainable development. But the sudden outbreak of Covid-19 has put a major challenge for countries like India where having access to classroom education is a daydream for many children. The rationale that having online classes is better than no classes on the ground of maintaining social distancing has accelerated the educational inequality further. To understand how our students as well as teachers are adopting technology, teaching learning process, their experiences and obstacles faced by them in this regard a survey in various schools, colleges and universities across Kolkata had been conducted from the perspectives of both the groups. Result showed neither teachers nor the students have gladly accepted this new paradigm. Unstable internet connection is the major hindrance as pointed out by both educator and learner. Students have also pointed out assignment submissions, doubt clearing as some important obstacles. Though everyone has accepted that technology driven education will lead to digital divide in the education system, it must be acknowledged this crisis has led to a drastic change in the higher education system.
DOI: 10.6084/m9.figshare.19361429.v1
title: Th17 cell plasticity towards a T-bet-dependent Th1 phenotype is required for bacterial control in Staphylococcus aureus infection

description: Manuscript:Th17 cell plasticity towards a T-bet-dependent Th1 phenotype is required for bacterial control in <i>Staphylococcus aureus</i> infection<br>Bartsch et al. 2022<br><b>Processed and filtered (meta) scRNA-seq data</b>For raw (unfiltered) datasets, seehttps://doi.org/10.6084/m9.figshare.14935458.v2<b><br></b>https://doi.org/10.6084/m9.figshare.19355459.v1<br><b><br></b>Mice Genotype:Figure 4: C57BL/6 IL17A<sup>Cre</sup>x Rosa26<sup>eYFP</sup>x Tbx21<sup>wt</sup>Figure 5: combined and annotated data from C57BL/6 IL17A<sup>Cre</sup>x Rosa26<sup>eYFP</sup>x Tbx21<sup>flox </sup><br>C57BL/6 IL17A<sup>Cre</sup>x Rosa26<sup>eYFP</sup>x Tbx21<sup>wt</sup>Organ: Kidney<br>Cells: FACS-sorted CD45<sup>+</sup>CD3<sup>+</sup>CD4<sup>+</sup>eYFP<sup>+</sup>Files:1. <i>Bartsch2022_Figure4_Tbx21WT_filtered_count_matrix.csv</i>: (380.65 MB) CSV Data; Matrix; UMI-Counts; columns: annotated barcodes; rows: mice gene symbols2. <i>Bartsch2022_Figure4_Tbx21WT_meta_data.csv: (</i>572.71 kB)CSV Data; Meta Data; columns: barcodes, cluster annotation, pseudotime of lineage Th17-&gt;Th1, umap dimension 1, map dimension 23. <i>Bartsch2022_Figure5_combined_Tbx21wt_ko_filtered_count_matrix.csv: (</i>526.34 MB)CSV Data; Matrix; UMI-Counts; columns: annotated barcodes; rows: mice gene symbols4. <i>Bartsch2022_Figure5_combined_Tbx21wt_ko_meta_data.csv:(</i>790.91 kB)<i> </i>CSV Data; Meta Data; columns: barcodes, annotation, origIdent (Tbx21wt vs Tb21ko (see mice genotype)), cluster, umap dimension 1, map dimension 2
DOI: 10.6084/m9.figshare.24993978.v1
title: supplementary dataset

description: The data set is related to a study on comparing topics, impact, disciplines, and research methods in articles published from 2016 to 2020 between <i>Scientometrics</i> and <i>Journal of Informetrics</i> (<i>JOI</i>)
DOI: 10.6084/m9.figshare.28749107.v2
title: AI_responses_rating

description: This dataset contains the results of an empirical evaluation of 1,200 AI-generated responses to 400 prompt questions related to public service contexts. The responses were assessed by 33 professionals across five institutional categories (adult education, regional policy, local welfare, union representatives, and program management). Each response was rated for understandability and accuracy across three temperature settings. The dataset includes both question-level metadata and user-assigned evaluation scores, and it supports the analysis presented in the paper <i>"Intelligence at Different Temperatures: Experimenting with AI Response Quality in Public Services."</i>
DOI: 10.6084/m9.figshare.6531293.v1
title: Single-cell and neuronal networks alterations in an in vitro model of Fragile X syndrome

description: Preprocessed, multi-site extracellular electrical recordings from neuronal cell cultures developing <i>ex vivo</i> on substrate-integrated microelectrode arrays (MEAs).<br>Intracellular patch-clamp recordings from single cultured neurons.
DOI: 10.17028/rd.lboro.11876535.v1
title: Systemic model of BIM adoption

description: This is cross-classified survey data of users, firms, and projects aimed to develop a systemic model of BIM adoption. The model combines variables in different analytical level such as users nested in firms and projects simultaneously. The dataset includes the name for each variable, the wording of the variables as in the questionnaire, and the measurement scale. The code for analysis using cross-classified multilevel modelling in MPlus is also provided.
DOI: 10.17632/h82gspgkpf
title: Dataset on photocatalytic degradation of Levofloxacin using hydroxyapatite photocatalyst: Optimization by response surface methodology

description: Response surface methodology on the optimization of Levofloxacin photodegradation using hydroxyapatite catalyst
DOI: 10.6084/m9.figshare.11420967.v2
title: Raw data files for SI-KCTP @ IPhN2+ Layers

description: SEM, infrared, cyclic voltammetry, UV-vis, EDS, and XPS characterization of a set of conjugated thin films. Additional IR, voltammetric, XPS, and UV-vis data has been added (Version 2)<br><br>
DOI: 10.6084/m9.figshare.1515997.v2
title: Twitter User Income Dataset

description: PONE-D-15-14201 User Income Dataset 5191 users annotated with their income through their SOC 3-digit occupation. Contents: Feature representation for each of the five feature categories: f-profile, f-shallow, f-demo, f-emo, f-topics<br>Users mapped to their income: users-income<br>Words for each topic: word-topics-200
DOI: 10.6084/m9.figshare.20238891.v1
title: Hab uso, consumo, motivaciones en videojuegos en tablets y móviles DEF_21 marzo 2022_16.53.xlsx

description: Dataset of the investigation about videogames in mobilephones about motivations to play, habits and consume.
DOI: 10.6084/m9.figshare.25097531.v1
title: Seismic Tomographic Model of the Hawaiian Ridge Line 01

description: Two-dimensional seismic Vp profile from MacGregor et al. (2023), including positions of the seafloor, the upper reflector, and the lower reflector along the profile. The Vp model is in netCDF-4 format and the others are in ascii format and contain the position along the line and depth below sea level. The origin of the profile is 20.49˚N, 155.8237˚W, and the azimuth of the profile is 46˚ from north.Reference: MacGregor, B. G., Dunn, R. A., Watts, A. B., Xu, C., & Shillington, D. J. (2023). A seismic tomography, gravity, and flexure study of the crust and upper mantle structure of the Hawaiian Ridge: 1. <i>Journal of Geophysical Research: Solid Earth</i>, <i>128</i>, e2023JB027218. https://doi. org/10.1029/2023JB027218
DOI: 10.6084/m9.figshare.29048159.v1
title: CO2 prediction results

description: Enhanced urban CO<sub>2</sub> monitoring and understanding the spatiotemporal patterns and driving factors of urban CO<sub>2</sub> concentrations contribute to the effective management of urban CO<sub>2</sub> emissions and the development of strategies to mitigate climate change. This study focuses on accurately predicting and mapping CO<sub>2</sub> concentrations in Shenzhen’s road network by integrating vehicle-cruising CO<sub>2</sub> observations, street view panoramas, and multisource remote sensing data. By utilizing street view panoramas to capture the surrounding street configuration features and multisource remote sensing data to map nearby urban landscape features, we developed the CO<sub>2</sub> prediction model with R² of 0.92 and MAE of 3.297 ppm. Furthermore, we identified eight high-CO<sub>2</sub> concentration areas and examined impacts of urban function, urban development, traffic condition, environment condition on CO<sub>2</sub> concentrations by explainable machine learning techniques. In urban centers, human activities have a substantial impact on CO2 levels, noticeably increasing during peak commuting times. Effective non-motorway planning, convenient public transport, and diverse urban functions can help reduce CO<sub>2</sub> concentrations. Areas with high vegetation cover also show high CO<sub>2</sub> concentrations, and the impact of greenery on Shenzhen’s CO<sub>2</sub> concentrations is positive in November. This paper offers a new perspective on refined CO<sub>2</sub> emission observation and the analysis of complex driving factors, providing novel technical approaches that enhance the precision of CO<sub>2</sub> concentrations prediction, and offer interpretable methods for urban CO2 monitoring and management.
DOI: 10.17632/wb9s6wy42d
title: Data for: Distributions of 137Cs and 90Sr activity concentrations in trunk of Scots pine (Pinus sylvestris L.) in the Chernobyl zone

description: The results of the distribution of cesium-137 and strontium-90 in model trees of Scotch pine in Chernobyl Exclusion Zone are presented.
DOI: 10.17632/ygdbpnhpzw
title: A computational package for measuring Topological Entanglement in Polymers, Proteins and Periodic systems (TEPPP)

description: Many materials, like polymer melts, solutions, biopolymers and textiles, are composed of entangled filaments. The entanglement in these systems significantly affects their mechanical properties and their function. We introduce the Topological Entanglement in Polymers, Proteins and Periodic systems (TEPPP) software, that enables to measure the topological and geometrical complexity in such systems. In particular, this software enables the computation of the Writhe, the Gauss linking integral and the Jones polynomial of each filament or pair of filaments in the system, whether they are open or closed. In particular, for systems employing Periodic Boundary Conditions (PBC), the software also allows to compute the total pairwise entanglement in PBC, using the Periodic linking number and the Periodic Writhe. For linear (open) chains, TEPPP can calculate all these topological parameters (including the Jones polynomial) without any closure scheme. In addition, TEPPP also enables measuring self and pairwise entanglement at different length-scales along a chain or a pair of chains. With appropriate preprocessing of input files, the code can also be used for star or branched architectures. We provide examples of how the code is used and we present results on the entanglement effect in polymers obtained using this package. We show how TEPPP can be used to measure the topological entanglement of linear polymer chains in a melt, revealing subtle entanglement transitions never seen before. We also used TEPPP to analyze the effect of knotting and its location in diblock copolymer melts, which reveals that knotting localization transition coincides with lamellar-disorder transition in these systems. Finally, we use TEPPP to reveal some of the topological structure of the SARS-CoV-2 Spike protein, which points to interesting structure in a region that contains the S1/S2 cleavage site.
DOI: 10.6084/m9.figshare.3566583.v1
title: Appendix D. Additional plots of the relationships between environmental variables and traits.

description: Additional plots of the relationships between environmental variables and traits.
DOI: 10.17605/osf.io/pmjfw
title: Money burning is driven by reciprocity rather than spite

description: Replication package to the paper "Money burning is driven by reciprocity rather than spite."
DOI: 10.17637/rh.14179124.v1
title: Population density of titi monkeys (Plecturocebus discolor) in Yasuní National Park, Ecuador

description: Dataset collected in 2010 using distance sampling methods to calculate the population density of titi monkeys (<i>Plecturocebus discolor</i>, formerly<i> Callicebus discolor</i>) around Estación Científica Yasuní (ECY) in the Ecuadorian Amazon (-0.67S, -76.40W). <br>Census data included as a CSV file, and information on dataset included in a README file. Dataset consists of titi monkey loud chorus responses to 68 playbacks of a loud chorus around the trail system of ECY. <br>Population density estimated using using Distance 6.0 with a hazard-rate key function and two cosine adjustments. Population density is estimated as 8.7±SE1.4 groups per km<sup>2</sup>, with a 95% confidence interval of 6 – 12 groups. <br>Data used in: S Papworth (2012) Small scale human-primate behavioural interactions in Amazonian Ecuador. PhD thesis, Imperial College London (https://doi.org/10.25560/10616).A Salcedo, M Mejia, K Slocombe, S Papworth (2014) Two case studies using playbacks to census neotropical primates: <i>Callicebus discolor</i> and <i>Alouatta palliata</i>. <i>Neotropical Primates</i> 21(2): 201-204 (https://doi.org/10.1896/044.021.0209).
DOI: 10.6084/m9.figshare.28099244.v1
title: <b>Exploring Marine Natural Products as Potential Quorum Sensing Inhibitors by Targeting the PqsR in </b><b><i>Pseudomonas aeruginosa</i></b><b>: Virtual Screening Assisted Structural Dynamics Study</b>

description: Simulations trajectory data of the marine natural products bound PqsR complexes are given.Mainly, the 50ps coordinates trajectory (.xtc file) is saved after removing PBC along with .tpr files
DOI: 10.6084/m9.figshare.28776415.v1
title: Abnormal global longitudinal strain and reduced serum inflammatory markers in cardiac AL amyloidosis patients without significant amyloid fibril deposition

description: Cardiac dysfunction in AL amyloidosis is thought to be partly related to the direct impact of AL LCs on cardiomyocyte function, with the degree of dysfunction at diagnosis as a major determinant of clinical outcomes. Nonetheless, mechanisms underlying LC-induced myocardial toxicity remain unclear. We identified gene expression changes correlating with human cardiac cell exposure to cardiomyopathy-associated AL LCs. We then confirmed these findings in a clinical dataset focusing on clinical parameters associated with pathways dysregulated at the gene expression level. Upon exposure to cardiomyopathy-associated AL LCs, cardiac cells exhibited gene expression changes related to myocardial contractile function and inflammation, leading us to hypothesise that there could be clinically detectable changes in global longitudinal strain (GLS) on echocardiogram and serum inflammatory markers in patients. Thus, we identified 29 patients with normal interventricular septum diameter (IVSd) but abnormal cardiac biomarkers, suggestive of LC-induced cardiac dysfunction. These patients display early cardiac biomarker staging, abnormal GLS, and significantly reduced serum inflammatory markers compared to patients with clinically evident amyloid fibril deposition. Collectively, our findings highlight early molecular and functional signatures of cardiac AL amyloidosis, with potential impact for developing improved patient biomarkers and novel therapeutics.
DOI: 10.6084/m9.figshare.9741230.v1
title: Transcriptome_Tagetes erecta

description: In this dataset, sequence of uningenes, annotation of all unigenes, GO annotation and KEGG pathway enrichment data are included.
DOI: 10.17632/9424skmnrk
title: Sugarcane Leaf Disease Dataset

description: Manually collected image dataset of sugarcane leaf disease. It has mainly five categories in it. Healthy, Mosaic, Redrot, Rust and Yellow disease. The dataset has been captured with smart phones of various configuration to maintain the diversity. It contains total 2569 images including all categories. This database has been collected in Maharashtra, India. The database is balanced and contains good variety. The image sizes are not constant as it originates form various capturing devices. All images are in RGB format.
DOI: 10.17632/xf8dz7962j
title: Examining the Relationship of National Values, Adaptive Culture, Transformational Leadership, and Strategic Human Resource Management to Organizational Resilience: A Quantitative Studey in the Philippine Government

description: This study examines the effects of an organization’s human resources, leadership, culture, and adaptation of national values to organizational resilience in the context of the Philippine public sector. Through a questionnaire administered to 186 respondents, results of the path analysis conducted using Jamovi revealed that strategic human resource management showed significant mediation paths for the relationship between national values and organizational resilience [NV→HR (B = 0.33, SE = 0.08, p < 0.001) and HR→OR (B = 0.17, SE = 0.06, p = 0.016)] and between adaptive culture and organizational resilience [AC→HR (B = 0.48, SE = 0.13, p < 0.001) and HR→OR (B = 0.17, SE = 0.06, p = 0.016)]; and that the path analysis model also converged with its predictions matching the actual data well (SRMR = 0.000 and CFI = 0.000).
DOI: 10.6084/m9.figshare.14596905.v1
title: Clothing colour choices to match fair and tanned skin types of White women

description: Excel xlsx and csv data sheets for 2 experiments. Each row represents one trial with one participant and defines the colour of simulated clothing (in Hue, Saturation and Value; Red, Green and Blue; and CIE L*a*b* colour spaces) the participant chose to match a facial image of a White woman with fair or relatively tanned skin. <br>Participants chose clothing colour from two colour ranges: (1) defined by hue 0-360 degrees and Value 0-1.0 with Saturation fixed at 1.0 (2) defined by hue 0-360 degrees and Saturation 0-1, with Value fixed at .0)experiment 1: 96 participants, 12 facesexperiment 2: 95 participants, 8 faces<br>The skin colour of the 12 stimulus faces (in CIE L*a*b* colour space) is specified on a separate sheet and csv file.<br>
DOI: 10.6084/m9.figshare.1572287.v2
title: Bioinformatics infrastructure and training survey

description: We undertook a poll of bioinformaticians, marketed through Twitter, in order to understand more about the current issues with bioinformatics practice and training. Methods: Through using a public Google Form we asked questions relating to frustrations, working practices, limitations of working practices. We also assessed whether the survey participant was UK based and what level of self-declared skill they had. Users had the opportunity to read the other responses to the survey, and edit or delete their answers. Results: 272 responses were received in the period 6th October 2015 to 12 October 2015 (7 days). This fileset presents the form, the responses (in Excel and CSV format) and the summary responses. The results may be of use for those wishing to understand more about the current issues facing bioinformaticians and bioinformatics training. The results are distributed under the CC-BY license. We are grateful to all participants who took the time to fill out this survey.
DOI: 10.6084/m9.figshare.3427418.v4
title: Genome-wide chromatin and gene expression profiling during memory formation and maintenance in adult mice. [Data Record 3: Immunoblotting]

description: <b>Description</b><br>The file contains the immunoblotting results for chromatin markers H3K9ac, H3K4me3, H3K27ac, H3K27me3 and H4K12ac for tissues ACC and CA1, and one immunoblotting result for CA1 neuronal H3K9ac for conditions Naive (N), context at 1h (C) and context-shock at 1h (CS). Each table contains the tested sample names (based on their condition), chromatin mark, immunoblot channel, number ID and signal strength, total, area and background. Each replicate had its signals compared between the chromatin mark and H4 signal immunoblotting, resulting in the ratio signal and standard deviation between the signals. The average signal for each condition N, C and CS and standard deviation of said signals were also recorded, and finally, some immunoblots run twice for the same chromatin mark had their averages and standard deviations calculated together.<br>