cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.xdvgwj
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tamiops swinhoei (Milne-Edwards, 1874), Tamiops swinhoer (Milne-Edwards, 1874))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 159 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075881-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.raxu2f
title: Occurrence Download

description: A dataset containing 2322 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Brazil",
 "Country is Paraguay",
 "Country is Argentina"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Picumnus exilis (M.H.K.Lichtenstein, 1823)"
 ]
}

 The dataset includes 2322 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0345110-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-37467
title: May Taylor, Congo, 1923-1924

description: [description english/roman)] Photos; PMU missionary application forms and references; correspondence.
DOI: 10.15468/dl.98nrcv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calonectria acicola Gadgil & M.A.Dick",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 {
 "or" : [
 "Country is United States of America",
 "Country is United States",
 "Country is United States of America",
 "Country is Canada",
 "Continent is North America"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138219-210914110416597/datasets/export for details.
DOI: 10.25549/pcra-c14-36270
title: Frank Adams, Congo, 1919-1929

description: [description english/roman)] Photos; missionary application forms and references; correspondence.
DOI: 10.15468/dl.kv8kqk
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capua vulgana (Frölich, 1828)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 17 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0217916-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zj5stx
title: Occurrence Download

description: A dataset containing 124 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Crocidura voi Osgood, 1910, Crocidura foxi Dollman, 1915, Crocidura guy Jenkins, Lunde & Moncrieff, 2009, Crocidura orii Kuroda, 1924)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 124 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075884-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bub68v
title: Occurrence Download

description: A dataset containing 89930 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xanthoria parietina (L.) Beltr., 1858"
 ]
}

 The dataset includes 89930 records from 416 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138237-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-34026
title: Correspondence book No.5 of Pentecostal Missionary Union [PMU], 1923-1925

description: [description english/roman)] Pentecostal Missionary Union [PMU] Correspondence book No. 5 including 57 pages of subject index; 2042 pages of PMU outgoing correspondence.
DOI: 10.15468/dl.4xtaj9
title: Occurrence Download

description: A dataset containing 768 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Callosciurus prevostii (Desmarest, 1822))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 768 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075893-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7qk8n7
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation"
 ]
 },
 "Country is Peru",
 "Geometry POLYGON((-75.64087 0.16315,-77.80518 -2.97705,-74.56696 -3.69639,-74.25494 -3.95948,-74.38293 -4.08099,-74.25989 -4.33518,-74.05774 -4.43158,-73.78528 -4.58053,-73.45129 -4.46663,-73.35461 -4.08975,-73.21399 -4.13359,-73.24036 -3.68639,-72.94153 -3.44954,-72.29993 -3.5285,-71.73743 -3.31794,-71.71106 -3.70393,-71.48254 -3.85302,-71.25403 -3.8004,-71.1134 -4.01085,-70.71707 -3.87241,-69.97659 -2.6659,-75.64087 0.16315))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Spatula discors (Linnaeus, 1766)"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084712-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-34024
title: Correspondence book No.5 of Pentecostal Missionary Union [PMU], 1923-1925

description: [description english/roman)] Pentecostal Missionary Union [PMU] Correspondence book No. 5 including 57 pages of subject index; 2042 pages of PMU outgoing correspondence.
DOI: 10.15468/dl.uv3m73
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cladosporium angustiherbarum Bensch, Crous & U.Braun",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 {
 "or" : [
 "Country is United States of America",
 "Country is United States",
 "Country is United States of America",
 "Country is Canada",
 "Continent is North America"
 ]
 }
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138184-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.442tct
title: Occurrence Download

description: A dataset containing 188 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astragalus cephalotes Banks & Sol."
 ]
}

 The dataset includes 188 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075887-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5jw26k
title: Occurrence Download

description: A dataset containing 1540 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Entoloma excentricum Bres., Entoloma vile (Fr.), Entoloma formosum (Fr.) Noordel., Entoloma griseoluridum (Kühner) M.M.Moser)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 1540 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0317579-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-34233
title: Correspondence book No.5 of Pentecostal Missionary Union [PMU], 1923-1925

description: [description english/roman)] Pentecostal Missionary Union [PMU] Correspondence book No. 5 including 57 pages of subject index; 2042 pages of PMU outgoing correspondence.
DOI: 10.15468/dl.wr4m8g
title: Occurrence Download

description: A dataset containing 13490 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lagopus leucura (Richardson, 1831)"
 ]
}

 The dataset includes 13490 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0202306-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vvpspm
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Ditsong National Museum of Natural History Collection: 1805-2008",
 "TaxonKey is Hemicordylus capensis (Smith, 1838)"
 ]
}

 The dataset includes 55 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102924-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yfu8hq
title: Occurrence Download

description: A dataset containing 2393 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vigna reticulata Hook.f."
 ]
}

 The dataset includes 2393 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030833-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-31654
title: Correspondence book No. 4 of Pentecostal Missionary Union [PMU], 1921-1923

description: [description english/roman)] Pentecostal Missionary Union [PMU] Correspondence book No. 4 including 2012 pages of PMU outgoing correspondence; 50 pages of subject index.
DOI: 10.5281/zenodo.10450788
title: CSS and Benchmark Datasets of GeminiMol
title: Binding Identification Benchmark Dataset
title: Virtual Screening Benchmark Dataset
title: QSAR Benchmark Dataset
title: ADMET Benchmark Dataset
title: NCI/DTP QSAR datasets

description: The molecular representation model is a neural network that converts molecular representations (SMILES, Graph) into feature vectors, that carries the potential to be applied across a wide scope of drug discovery scenarios. However, current molecular representation models have been limited to 2D or static 3D structures, overlooking the dynamic nature of small molecules in solution and their ability to adopt flexible conformational changes crucial for drug-target interactions. 

To address this limitation, we propose a novel strategy that incorporates the conformational space profile into molecular representation learning. By capturing the intricate interplay between molecular structure and conformational space, our strategy enhances the representational capacity of our model named GeminiMol. Consequently, when pre-trained on a miniaturized molecular dataset, the GeminiMol model demonstrates a balanced and superior performance not only on traditional molecular property prediction tasks but also on zero-shot learning tasks, including virtual screening and target identification. By capturing the dynamic behavior of small molecules, our strategy paves the way for rapid exploration of chemical space, facilitating the transformation of drug design paradigms. 

In this study, a diverse collection of 39,290 molecules was employed for conformational searching and shape alignment to generate a comprehensive dataset of molecular conformational space similarity. To assess the model's performance, the benchmark datasets comprising over millions molecules was utilized for downstream tasks. Here, we provide all the training and benchmarking data used for this study to facilitate the reproducibility of the work.
DOI: 10.15468/dl.fgnts5
title: Occurrence Download

description: A dataset containing 11341 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pisidium amnicum (O.F.Müller, 1774), Euglesa casertana (Poli, 1791))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 11341 records from 145 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0249402-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10273479
title: CSS and Benchmark Datasets of GeminiMol
title: Binding Identification Benchmark Dataset
title: Virtual Screening Benchmark Dataset
title: QSAR Benchmark Dataset
title: ADMET Benchmark Dataset
title: NCI/DTP QSAR datasets

description: The molecular representation model is a neural network that converts molecular representations (SMILES, Graph) into feature vectors, that carries the potential to be applied across a wide scope of drug discovery scenarios. However, current molecular representation models have been limited to 2D or static 3D structures, overlooking the dynamic nature of small molecules in solution and their ability to adopt flexible conformational changes crucial for drug-target interactions. 

To address this limitation, we propose a novel strategy that incorporates the conformational space profile into molecular representation learning. By capturing the intricate interplay between molecular structure and conformational space, our strategy enhances the representational capacity of our model named GeminiMol. Consequently, when pre-trained on a miniaturized molecular dataset, the GeminiMol model demonstrates a balanced and superior performance not only on traditional molecular property prediction tasks but also on zero-shot learning tasks, including virtual screening and target identification. By capturing the dynamic behavior of small molecules, our strategy paves the way for rapid exploration of chemical space, facilitating the transformation of drug design paradigms. 

In this study, a diverse collection of 39,290 molecules was employed for conformational searching and shape alignment to generate a comprehensive dataset of molecular conformational space similarity. To assess the model's performance, the benchmark datasets comprising over millions molecules was utilized for downstream tasks. Here, we provide all the training and benchmarking data used for this study to facilitate the reproducibility of the work.
DOI: 10.25549/pcra-c14-33435
title: Alfred Lewer, China, 1913-1924

description: [description english/roman)] Tribute from Donald Gee [4 pages]; photo; missionary application forms and references; correspondence; telegrams regarding Lewer's death.
DOI: 10.15468/dl.wp4ee6
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alyssum murale var. pichleri (Velen.) T.R.Dudley"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0202304-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vg96hm
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acrocalymma vagum (D.F.Farr) Crous & Trakun.",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 {
 "or" : [
 "Country is United States of America",
 "Country is United States",
 "Country is United States of America",
 "Country is Canada",
 "Continent is North America"
 ]
 }
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138197-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sc94n7
title: Occurrence Download

description: A dataset containing 46812 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Carex montana L."
 ]
}

 The dataset includes 46812 records from 178 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075885-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-31684
title: Correspondence book No. 4 of Pentecostal Missionary Union [PMU], 1921-1923

description: [description english/roman)] Pentecostal Missionary Union [PMU] Correspondence book No. 4 including 2012 pages of PMU outgoing correspondence; 50 pages of subject index.
DOI: 10.15468/dl.ynzvry
title: Occurrence Download

description: A dataset containing 2096 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Brazil",
 "Country is Argentina",
 "Country is Paraguay"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Selenidera gouldii (Natterer, 1837)"
 ]
}

 The dataset includes 2096 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0345067-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-31841
title: Correspondence book No. 4 of Pentecostal Missionary Union [PMU], 1921-1923

description: [description english/roman)] Pentecostal Missionary Union [PMU] Correspondence book No. 4 including 2012 pages of PMU outgoing correspondence; 50 pages of subject index.
DOI: 10.15468/dl.6rt6jw
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pestalotiopsis mangiferae (Henn.) Steyaert",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 {
 "or" : [
 "Country is United States of America",
 "Country is United States",
 "Country is United States of America",
 "Country is Canada",
 "Continent is North America"
 ]
 }
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138195-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.naghca
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Absidia Tiegh., 1878",
 "Country is one of (Switzerland)"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0345075-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tksyup
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astragalus imitans Podlech"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075895-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-31666
title: Correspondence book No. 4 of Pentecostal Missionary Union [PMU], 1921-1923

description: [description english/roman)] Pentecostal Missionary Union [PMU] Correspondence book No. 4 including 2012 pages of PMU outgoing correspondence; 50 pages of subject index.
DOI: 10.15468/dl.qkydtd
title: Occurrence Download

description: A dataset containing 6041 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Chamaeza campanisona (Lichtenstein, 1823)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6041 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014562-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.922b4f
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Bifascioides leucomelanella (Rebel, 1917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 21 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035607-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.