cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4903635
title: Expression dysregulation as a mediator of fitness costs in antibiotic resistance

description: ABSTRACT: Antimicrobial resistance (AMR) poses a threat to global health and the economy. Rifampicin-resistant <em>Mycobacterium tuberculosis</em> accounts for a third of the global AMR burden. Gaining the upper hand on AMR requires a deeper understanding of the physiology of resistance. AMR often results in a fitness cost in absence of drug. Identifying the molecular mechanisms underpinning this cost could help strengthen future treatment regimens. Here, we used a collection of <em>M. tuberculosis</em> strains providing an evolutionary and phylogenetic snapshot of rifampicin resistance, and subjected them to genome-wide transcriptomic and proteomic profiling to identify key perturbations of normal physiology. We found that the clinically most common rifampicin resistance-conferring mutation RpoB Ser450Leu imparts considerable gene expression changes, many of which are mitigated by the compensatory mutation in RpoC Leu516Pro. However, our data also provide evidence for pervasive epistasis: the same resistance mutation imposed a different fitness cost and functionally distinct changes to gene expression in genetically unrelated clinical strains. Finally, we report a likely post-transcriptional modulation of gene expression that is shared in most of the tested strains carrying RpoB Ser450Leu, resulting in an increased abundance of proteins involved in central carbon metabolism. These changes contribute to a more general trend, in which the disruption of the composition of the proteome correlates with the fitness cost of the RpoB Ser450Leu mutation in different strains. USAGE: Please unzip the data in the data folder of the repository cloned from Github.
description: This work was supported by the SystemsX.ch project "TbX", the National Institutes of Health project Omics4TB Disease Progression (U19 AI106761), Swiss National Science Foundation (grants 310030_188888, IZLSZ3_170834 and CRSII5_177163) and the European Research Council (309540-EVODRTB and 883582-ECOEVODRTB). The authors would like to thank Uwe Sauer and Michael Zimmermann for their input during the early stages of the project.
DOI: 10.5281/zenodo.4903634
title: Expression dysregulation as a mediator of fitness costs in antibiotic resistance

description: ABSTRACT: Antimicrobial resistance (AMR) poses a threat to global health and the economy. Rifampicin-resistant <em>Mycobacterium tuberculosis</em> accounts for a third of the global AMR burden. Gaining the upper hand on AMR requires a deeper understanding of the physiology of resistance. AMR often results in a fitness cost in absence of drug. Identifying the molecular mechanisms underpinning this cost could help strengthen future treatment regimens. Here, we used a collection of <em>M. tuberculosis</em> strains providing an evolutionary and phylogenetic snapshot of rifampicin resistance, and subjected them to genome-wide transcriptomic and proteomic profiling to identify key perturbations of normal physiology. We found that the clinically most common rifampicin resistance-conferring mutation RpoB Ser450Leu imparts considerable gene expression changes, many of which are mitigated by the compensatory mutation in RpoC Leu516Pro. However, our data also provide evidence for pervasive epistasis: the same resistance mutation imposed a different fitness cost and functionally distinct changes to gene expression in genetically unrelated clinical strains. Finally, we report a likely post-transcriptional modulation of gene expression that is shared in most of the tested strains carrying RpoB Ser450Leu, resulting in an increased abundance of proteins involved in central carbon metabolism. These changes contribute to a more general trend, in which the disruption of the composition of the proteome correlates with the fitness cost of the RpoB Ser450Leu mutation in different strains. USAGE: Please unzip the data in the data folder of the repository cloned from Github.
description: This work was supported by the SystemsX.ch project "TbX", the National Institutes of Health project Omics4TB Disease Progression (U19 AI106761), Swiss National Science Foundation (grants 310030_188888, IZLSZ3_170834 and CRSII5_177163) and the European Research Council (309540-EVODRTB and 883582-ECOEVODRTB). The authors would like to thank Uwe Sauer and Michael Zimmermann for their input during the early stages of the project.
DOI: 10.5281/zenodo.4488070
title: Raw data to: "Heterologous arenavirus vector prime – boost overrules self-tolerance for efficient tumor-specific CD8 T cell attack"

description: Raw data underlying the publication by Bonilla et al. entitled "Heterologous arenavirus vector prime – boost overrules self-tolerance for efficient tumor-specific CD8 T cell attack"
DOI: 10.5281/zenodo.4488069
title: Raw data to: "Heterologous arenavirus vector prime – boost overrules self-tolerance for efficient tumor-specific CD8 T cell attack"

description: Raw data underlying the publication by Bonilla et al. entitled "Heterologous arenavirus vector prime – boost overrules self-tolerance for efficient tumor-specific CD8 T cell attack"
DOI: 10.25405/data.ncl.12136365
title: Lin_TTFT_CLL_metaAssoc.txt

description: Summary statistics file for Lin et al, Genome-wide association study identifies risk loci for progressive chronic lymphocytic leukemia.
DOI: 10.25405/data.ncl.12136365.v3
title: Lin_TTFT_CLL_metaAssoc.txt

description: Summary statistics file for Lin et al, Genome-wide association study identifies risk loci for progressive chronic lymphocytic leukemia.
DOI: 10.25405/data.ncl.12136365.v2
title: Lin_TTFT_CLL_metaAssoc.txt

description: Summary statistics file for Lin et al, Genome-wide association study identifies risk loci for progressive chronic lymphocytic leukemia.
DOI: 10.5281/zenodo.4944245
title: ImcSegmentationPipeline v1 output for IMC Workshop 2019 raw data

description: Output of ImcSegmentationPipeline v1 processing for IMC Workshop 2019 at Bodenmiller Lab.
DOI: 10.5281/zenodo.4944244
title: ImcSegmentationPipeline v1 output for IMC Workshop 2019 raw data

description: Output of ImcSegmentationPipeline v1 processing for IMC Workshop 2019 at Bodenmiller Lab.
DOI: 10.5281/zenodo.4944252
title: Graphs Dataset

description: The dataset contains 100,000 random graphs with 10, 20, 50 and 100 vertices. This set was obtained using the Graphs Generation software library based on a neural network approach. All graphs are stored as an adjacency matrix in *.npy format.
DOI: 10.5281/zenodo.4944251
title: Graphs Dataset

description: The dataset contains 100,000 random graphs with 10, 20, 50 and 100 vertices. This set was obtained using the Graphs Generation software library based on a neural network approach. All graphs are stored as an adjacency matrix in *.npy format.
DOI: 10.21942/uva.14778711
title: Data for 'Emotion: The Commander of the Remote Control'

description: Dataset effects analysis
DOI: 10.21942/uva.14778711.v1
title: Data for 'Emotion: The Commander of the Remote Control'

description: Dataset effects analysis
DOI: 10.6084/m9.figshare.13580387
title: Energy Engineering and Power Technology, bibliometrics of Chinese publications

description: Working materials, tables and graphs, to the preprint "Landscape of China’s Scientific Publications in 2018–2020 on the Subject Energy Engineering and Power Technology"This study aims to reveal and analyze the landscape of China’s scientific publications in 2018–2020 on the subject ‘Energy Engineering and Power Technology’ using bibliometric data from the Lens and Scopus services<br><br>article based on this data TOTAL NUMBERS MATTER. LANDSCAPE OF CHINA’S SCIENTIFIC PUBLICATIONS IN 2018–2020 ON THE ENERGY ISSUE DOI 10.29222/ipng.2078-5712.2021-32.art7<br>
DOI: 10.6084/m9.figshare.13580387.v1
title: Energy Engineering and Power Technology, bibliometrics of Chinese publications

description: Working materials, tables and graphs, to the preprint "Landscape of China’s Scientific Publications in 2018–2020 on the Subject Energy Engineering and Power Technology"This study aims to reveal and analyze the landscape of China’s scientific publications in 2018–2020 on the subject ‘Energy Engineering and Power Technology’ using bibliometric data from the Lens and Scopus services<br><br>article based on this data TOTAL NUMBERS MATTER. LANDSCAPE OF CHINA’S SCIENTIFIC PUBLICATIONS IN 2018–2020 ON THE ENERGY ISSUE DOI 10.29222/ipng.2078-5712.2021-32.art7<br>
DOI: 10.5517/ccdc.csd.cc27srph
title: CCDC 2079377: Experimental Crystal Structure Determination

description: Related Article: Frank R. Fronczek|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27swxv
title: CCDC 2079508: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27swyw
title: CCDC 2079509: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27swzx
title: CCDC 2079510: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27wydh
title: CCDC 2082437: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27x4fr
title: CCDC 2082624: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27xcm5
title: CCDC 2082847: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold, Linda H. Doerrer and Hannah Skipper|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27xcp7
title: CCDC 2082849: Experimental Crystal Structure Determination

description: Related Article: Arnold L. Rheingold, Linda H. Doerrer and Hannah Skipper|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc27zfk7
title: CCDC 2084829: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Hilke Burmeister, Ingo Ott|2021|CSD Communication|||
DOI: 10.25646/8650
title: Tagesdaten-CSV aus dem DIVI-Intensivregister

description: Die Tagesdaten-CSV entspricht einem Auszug der Daten des DIVI-Intensivregisters. Die Datei enthält eine Aggregation der aktuellsten Meldungen pro Landkreis. Es werden die aktuell gemeldeten Anzahlen der COVID-19 Intensivfälle sowie die gemeldeten intensivmedizinischen Behandlungskapazitäten angezeigt. Die Tagesdaten-CSV liefert dabei ausschließlich einen Blick auf die Daten gemäß dem Stand des betrachteten Tages. Die Daten sind im situationsbedingten Kontext aufbereitet, damit sind verschiedene Tagesdaten-CSVs u.U. nicht direkt miteinander vergleichbar. Die aktuellsten Meldungen werden im gewählten Betrachtungszeitfenster über alle Meldebereiche und Standorte aufsummiert. Weitere Informationen sind zu finden unter https://www.intensivregister.de/#/faq
DOI: 10.5281/zenodo.4944521
title: Triggers and consequences of landslide-induced tsunamis – reconstruction of the Taan Fiord 2015 tsunami event

description: Models codes are provided for some examples of the adopted modeling approaches. STL. files for the solid bodies are available in the zip file. A bathymetric map of the Taan Fiord on October 2015 is provided. Values of the solid-fluid mixture density for different initial close packing volume fractions are shown in the table. A table summarizes the available model approaches, implemented in FLow 3D, useful in reproducing a Landslide-induced tsunami
DOI: 10.14457/cu.the.1984.24
title: วิธีการปรับสภาพวัสดุผิวจราจรแอสฟัลติกคอนกรีตเก่านำมาใช้งานใหม่ ในประเทศไทย
DOI: 10.14457/cu.the.1984.25
title: การสื่อสารเพื่อการเจริญพันธุ์ : ศึกษาเฉพาะกรณีสตรีที่มีบุตรมาก
DOI: 10.14457/cu.the.1984.26
title: การพัฒนาวิธีวิเคราะห์ไอโซโทปของยูเรเนียม-235 และยูเรเนียม-238 โดยใช้เทคนิคอิเลคโตรดีโพซิชัน และใช้อัลฟาสเปคโตรมิเตอร์วัดรังสี
DOI: 10.5281/zenodo.4944611
title: Triggers and consequences of landslide-induced tsunamis – reconstruction of the Taan Fiord 2015 tsunami event

description: Models codes are provided for some examples of the adopted modeling approaches. STL. files for the solid bodies are available in the zip file. A bathymetric map of the Taan Fiord on October 2015 is provided. Values of the solid-fluid mixture density for different initial close packing volume fractions are shown in the table. A table summarizes the available model approaches, implemented in FLow 3D, useful in reproducing a Landslide-induced tsunami
DOI: 10.14457/cu.the.2003.1210
title: Admicellar polymerization of styrene on cotton
DOI: 10.14457/cu.the.2003.1211
title: Dissolution of analcime : the nature of acid attack and the reaction kinetics
DOI: 10.14457/cu.the.2003.1212
title: Sol-gel processing of glycolato titanium
DOI: 10.6084/m9.figshare.14778804
title: Primary data for food-energy-land nexus of low-carbon indoor farming study

description: Four datasets are contained related to the study "Quantifying the food-energy-land nexus of low-carbon indoor farming: regional implications".
DOI: 10.6084/m9.figshare.14778804.v1
title: Primary data for food-energy-land nexus of low-carbon indoor farming study

description: Four datasets are contained related to the study "Quantifying the food-energy-land nexus of low-carbon indoor farming: regional implications".
DOI: 10.14278/rodare.1001
title: Raw data, magnetization measurements for paper Room temperature ferromagnetism in Sb doped ZnO

description: Raw data, magnetization measurements for samples involved in paper Room temperature ferromagnetism in Sb doped ZnO
DOI: 10.14278/rodare.1000
title: Raw data, magnetization measurements for paper Room temperature ferromagnetism in Sb doped ZnO

description: Raw data, magnetization measurements for samples involved in paper Room temperature ferromagnetism in Sb doped ZnO
DOI: 10.34740/kaggle/dsv/2332676
title: 2021 World Population (updated daily)
DOI: 10.14457/tu.the.2020.81
title: Factor affecting the intention to choose and stay at a resort located in an orchard: an empirical study of a resort in Chanthaburi Province

description: The tourism industry is one of the most important parts of the economy in Thailand, which accounted for 13-14% of Thai’s economy. According to the Covid-19 pandemic in many countries, including Thailand, international tourism has been suspended. Public and private sectors are turning to focus on encouraging Thai tourists to travel within the country. Chanthaburi province, one of top destinations in Thailand, is located in the East of Thailand and has approximately 3.0 million travelers in 2019. It is notable for the peaceful seaside beaches, tropical fruits, mountains, and waterfalls. The study is aimed to identify factors affecting the intention to choose and stay at a resort in Chanthaburi, in particular, a resort that located in a fruit orchard. Questionnaires are developed and distributed to collect data. Then multiple regression analysis is employed to determine significant factors. The results indicate 14 significant factors, for instance, beach & activities inside the resort, and attractions nearby the resort. Recommendations are also discussed.
DOI: 10.14457/tu.the.2020.82
title: DCU allocation for AMI using wireless communication in Pattaya District

description: Nowadays Smart metering system is well-known in many countries. It enables two-way communication between the utility and customer which can be utilized to enhance customer experience and also make efficient distributed power by the utility. Wireless communication systems have contributed to the creation of smarter and more reliable power systems. This thesis presents an algorithm for positioning a Data concentrator unit. The proposed algorithm determines the number and placement of DCU using a clustering algorithm. The solutions given by the proposed algorithm are simulated by Pattaya District data. The results show smart meters that are grouped with the selected DCUs. The evaluation is included to verify the efficient of the proposed algorithm.
DOI: 10.14457/tu.the.2020.83
title: Study on impacts of tourism industry in historical zone Muang District, Nan Province, Thailand

description: The tourism industry is a major economic driver for countries around the world. Tourism development has both advantages and disadvantages. Residents’ perception of these advantages and disadvantages of the tourism industry affects their level of satisfaction and their supports for the tourism program locally. Thailand is one of the famous tourist attraction with diverse tourism destinations including natural, historical and cultural locations. Nan Province is one of the northern provinces of Thailand with many cultural and natural attractions. In 2015, Thai government had a tourism campaign to promote Nan with the hope to increase the number of tourists and generated more income for the local community. However, the tourism program also has some negative impacts on environment. This study investigates residents’ perception of the tourism impacts. The questionnaire survey of Nan Province residents was the main data collection method from September to October 2017. The multiple regression, one-way ANOVA and the Structure Equation Model (SEM) were used to analyze the data. The findings showed that the perception of residents affects their attitudes and their supports for the tourism development. The residents who have positive perceptions about the local tourism campaign tend to support tourism development while the residents with negative perceptions about the program tend not to support the program. In addition, the findings showed that the residents’ demographic factors affect their perception. Education level is the most influential factor on residents’ perception of the positive and negative impacts of a resident.
DOI: 10.14457/tu.the.2020.84
title: Development of titanium dioxide- MXene composites for removal of antibiotic in water

description: MXenes are new family of two-dimensional (2D) transition metal carbide or nitrides. In recent years, MXenes have attracted tremendous attention and emerged as a new 2D material for exploration of various applications including energy storage and catalysis due to their unique properties such as good electrical conductivity, hydrophilicity, and ion intercalability. However, a few studies exist concerning environmental remediation. Therefore, this work aimed to develop TiO2-Ti3C2 composites for removal of enrofloxacin in water as well as characterized MXene and TiO2-Ti3C2 composites. The TiO2-Ti3C2 composites were successfully synthesized via calcination and microwave solvothermal methods. MXene (Ti3C2) was synthesized from the MAX phase (Ti3AlC2) by using HCl-LiF as an etchant and after that, MXene was applied as a precursor of TiO2 particles. The results showed that after modification of MXene with calcination and microwave solvothermal methods, the Al element was unnoticeable. To investigate the photocatalytic activity of photocatalyst, methylene blue (MB) was employed as a model pollutant. The NaOH-treated MXene cannot used as a photocatalyst in this experiment due to its good adsorption, leading it was difficult to observe the photocatalytic activity at high concentration of MB. However, the adsorption capacity of NaOH-treated MXene was up to 97.88 mg/g. Next, the TiO2-Ti3C2 composites (TiO2-MX) which synthesized by microwave solvothermal method exhibited the photocatalytic activity and adsorption ability greater than calcined MXene. For the degradation of enrofloxacin in water, the order of photocatalytic activity was found to be TiO2-MX@225C/NaCl &gt; TiO2-MX@200C/NaCl &gt; TiO2-MX@200C &gt; TiO2-MX@175C/NaCl &gt; TiO2-MX@175C &gt; TiO2-MX@150C/NaCl whereas the order of adsorption ability was observed to be MXene (etching 1 time) &gt; TiO2-MX@175C/NaCl &gt; TiO2-MX@200C/NaCl &gt; TiO2-MX@225C/NaCl &gt; TiO2-MX@150C/NaCl &gt; TiO2-MX@175C &gt; TiO2-MX@200C. The photocatalytic activity was improved when TiO2-Ti3C2 composites were synthesized by microwave solvothermal in the presence of NaCl. Moreover, when the reaction temperature for synthesis of TiO2-Ti3C2 composites increased, the photocatalytic activity for removal of enrofloxacin was enhanced. In case of adsorption, the TiO2-Ti3C2 with NaCl could adsorb enrofloxacin better than TiO2-Ti3C2 without NaCl since Na which had positively charged exchange ion with enrofloxacin and the TiO2-MX without NaCl has lost their adsorption ability due to the high amount of TiO2 particles were formed on MXene. Nevertheless, the original MXene could adsorb enrofloxacin greater than TiO2-Ti3C2 composites because the positive charge of enrofloxacin was adsorbed by negative charge of MXene while TiO2-Ti3C2 composites composed of TiO2 particles. Consequently, the repulsion force between TiO2 particles and MB solution was observed.
DOI: 10.14457/tu.the.2019.1471
title: Multiuser immersive virtual reality application for realtime collaboration in design review process

description: Most project stakeholders have experienced problems understanding each other during a design review process of complex construction projects while staying remotely. In reality, the difficulty of sharing a common understanding during design review among remote project participants is a barrier to a successful project delivery. The recent advancement in visualization technology—Virtual Reality (VR) provides a practical solution to visualize and interact in the virtual environment of design, construction, and maintenance. However, the difficulty of bringing remote participants together in a virtual environment has impeded the implementation of VR technology in Architecture, Engineering and Construction (AEC) industry. The recent development of VR makes possible the solution for interactive visualization for design, construction, and maintenance. To fill the gap, this thesis presents a developed VR application for the realtime collaboration approach for remote users that enables clients and design professionals to clearly explore every aspect of their virtual project and facilitates interpersonal project communication in an interactive VR environment by using VR headsets. The primary aim of this research is to develop and test a VR application that provides not only a shared immersive environment but also realtime interaction between users in the virtual world. To successfully conduct this research study, a comparison was made between the immersive VR and the non-immersive VR experience among 44 students in terms of realtime collaboration in a building inspection task. Results indicated that the users of the developed immersive VR application outperformed those of the non-immersive platform as measured by the percentage of correctly identified design errors during the building inspection experiment. In practice, the developed application is expected to assist the project participants to create a shared immersive environment of their virtual project for an effective design review before construction work begins.
DOI: 10.34740/kaggle/dsv/2332700
title: YouTube Trending Video Dataset (updated daily)