cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.15178830
title: Additional file 7 of Expanding the potential genes of inborn errors of immunity through protein interactions

description: Additional file 7: Table S7. IEI Candidate Genes with Average in NK Cells &gt; 1 TPM Filter.
DOI: 10.6084/m9.figshare.15178830.v1
title: Additional file 7 of Expanding the potential genes of inborn errors of immunity through protein interactions

description: Additional file 7: Table S7. IEI Candidate Genes with Average in NK Cells &gt; 1 TPM Filter.
DOI: 10.6084/m9.figshare.15178833.v1
title: Additional file 8 of Expanding the potential genes of inborn errors of immunity through protein interactions

description: Additional file 8: Table S8. IEI Candidate Genes with Average in T Cells &gt; 1 TPM Filter.
DOI: 10.6084/m9.figshare.15178833
title: Additional file 8 of Expanding the potential genes of inborn errors of immunity through protein interactions

description: Additional file 8: Table S8. IEI Candidate Genes with Average in T Cells &gt; 1 TPM Filter.
DOI: 10.6084/m9.figshare.15178865
title: Additional file 5 of Animal-borne acoustic data alone can provide high accuracy classification of activity budgets

description: Additional file 5: Table S1. Number, duration and proportion of time spent in each activity (diving, floating on water and flying), for each of the 9 Cape gannets with full trips recorded. Individual 41M (used in model training) is not included here as the trip was only partially recorded. Individual 17M was manually labelled on a part of the entire trip.
DOI: 10.6084/m9.figshare.15178865.v1
title: Additional file 5 of Animal-borne acoustic data alone can provide high accuracy classification of activity budgets

description: Additional file 5: Table S1. Number, duration and proportion of time spent in each activity (diving, floating on water and flying), for each of the 9 Cape gannets with full trips recorded. Individual 41M (used in model training) is not included here as the trip was only partially recorded. Individual 17M was manually labelled on a part of the entire trip.
DOI: 10.6084/m9.figshare.15178868
title: Additional file 6 of Animal-borne acoustic data alone can provide high accuracy classification of activity budgets

description: Additional file 6: Table S2. Systematic review on published articles that automatically classified activities based on animal-borne devices.
DOI: 10.6084/m9.figshare.15178868.v1
title: Additional file 6 of Animal-borne acoustic data alone can provide high accuracy classification of activity budgets

description: Additional file 6: Table S2. Systematic review on published articles that automatically classified activities based on animal-borne devices.
DOI: 10.6084/m9.figshare.15178878
title: Additional file 1 of Characterization of porcine sapelovirus prevalent in western Jiangxi, China

description: Additional file 1: Supplementary Fig. 1. Development of a SYBR Green I-based real-time PCR method for PSV detection. (a) Standard curves generated from the mean cycle threshold (CT) values obtained against the diluted plasmid standards (log 10 copy number). The correlation coefficient (R2) and the equation of the regression curve (Y) were calculated. Equation: y=-5.1538x+50.716; correlation coefficient: R2=0.9996. (b) Melting curve analysis of real-time PCR based on SYBR Green I. The Tm of PSV real-time PCR was 84.82 °C. (c) Specificity of the PSV SYBR Green I real-time PCR. Only the PSV-HuN1 strain showed a high-intensity fluorescent signal. CSFV, PRRSV, PRV, PEDV, PTV, and JEV did not show specific amplification. (d) Sensitivity of the SYBR Green I real-time PCR. The 10-fold serial dilutions of pMD19-T-PSV plasmids ranging from 5.22×108-5.22×101 copies/μL marked as 1-8, respectively. (e) The agarose gel electrophoresis results of conventional PCR. DNA marker of 5000 bp was used. The 10-fold serial dilutions of pMD19-T-PSV plasmids ranging from 5.22×108-5.22 copies/μL in lanes 1-9, respectively; lane 10 contains the negative control.
DOI: 10.6084/m9.figshare.15178878.v1
title: Additional file 1 of Characterization of porcine sapelovirus prevalent in western Jiangxi, China

description: Additional file 1: Supplementary Fig. 1. Development of a SYBR Green I-based real-time PCR method for PSV detection. (a) Standard curves generated from the mean cycle threshold (CT) values obtained against the diluted plasmid standards (log 10 copy number). The correlation coefficient (R2) and the equation of the regression curve (Y) were calculated. Equation: y=-5.1538x+50.716; correlation coefficient: R2=0.9996. (b) Melting curve analysis of real-time PCR based on SYBR Green I. The Tm of PSV real-time PCR was 84.82 °C. (c) Specificity of the PSV SYBR Green I real-time PCR. Only the PSV-HuN1 strain showed a high-intensity fluorescent signal. CSFV, PRRSV, PRV, PEDV, PTV, and JEV did not show specific amplification. (d) Sensitivity of the SYBR Green I real-time PCR. The 10-fold serial dilutions of pMD19-T-PSV plasmids ranging from 5.22×108-5.22×101 copies/μL marked as 1-8, respectively. (e) The agarose gel electrophoresis results of conventional PCR. DNA marker of 5000 bp was used. The 10-fold serial dilutions of pMD19-T-PSV plasmids ranging from 5.22×108-5.22 copies/μL in lanes 1-9, respectively; lane 10 contains the negative control.
DOI: 10.6084/m9.figshare.15178880
title: Additional file 3 of PI3K-AKT, JAK2-STAT3 pathways and cell–cell contact regulate maspin subcellular localization

description: Additional file 2. Table S1: All maspin ligands identified by co-IP/MS
DOI: 10.6084/m9.figshare.15178880.v1
title: Additional file 3 of PI3K-AKT, JAK2-STAT3 pathways and cell–cell contact regulate maspin subcellular localization

description: Additional file 2. Table S1: All maspin ligands identified by co-IP/MS
DOI: 10.6084/m9.figshare.15178883
title: Additional file 4 of PI3K-AKT, JAK2-STAT3 pathways and cell–cell contact regulate maspin subcellular localization

description: Additional file 3. Table S2: Gene ontology and Reactome analyses for maspin ligands identified in EGF-treated samples
DOI: 10.6084/m9.figshare.15178883.v1
title: Additional file 4 of PI3K-AKT, JAK2-STAT3 pathways and cell–cell contact regulate maspin subcellular localization

description: Additional file 3. Table S2: Gene ontology and Reactome analyses for maspin ligands identified in EGF-treated samples
DOI: 10.6084/m9.figshare.15178886
title: Additional file 5 of PI3K-AKT, JAK2-STAT3 pathways and cell–cell contact regulate maspin subcellular localization

description: Additional file 4. Table S3: Protein–protein interaction network analysis for maspin ligands identified in EGF-treated samples
DOI: 10.6084/m9.figshare.15178886.v1
title: Additional file 5 of PI3K-AKT, JAK2-STAT3 pathways and cell–cell contact regulate maspin subcellular localization

description: Additional file 4. Table S3: Protein–protein interaction network analysis for maspin ligands identified in EGF-treated samples
DOI: 10.6084/m9.figshare.15178722
title: Matriz de segmento total y mapa conceptual usado en el proyecto

description: Matriz de segmento total y mapa conceptual tomado como base para el análisis hecho a través de MaxQDA, de los 69 artículos estudiados en el proyecto.
DOI: 10.6084/m9.figshare.15178722.v1
title: Matriz de segmento total y mapa conceptual usado en el proyecto

description: Matriz de segmento total y mapa conceptual tomado como base para el análisis hecho a través de MaxQDA, de los 69 artículos estudiados en el proyecto.
DOI: 10.6084/m9.figshare.14617449.v6
title: Clinical profiles and genetic spectra of 814 Chinese children with short stature

description: Supplementary Material from Clinical profiles and genetic spectra of 814 Chinese children with short stature <br>
DOI: 10.6084/m9.figshare.15124368
title: Effects of chronic exposure to low levels of IR on Medaka (<i>Oryzias latipes</i>): a proteomic and bioinformatic approach

description: Chronic exposure to ionizing radiation (IR) at low doses (&lt;100 mGy) has been insufficiently studied to understand fully the risk to health. Relatively little knowledge exists regarding how species and healthy tissues respond at the protein level to chronic exposure to low doses of IR, and mass spectrometric-based profiling of protein expression is a powerful tool for studying changes in protein abundance. SDS gel electrophoresis, LC-MS/MS mass spectrometry-based approaches and bioinformatic data analytics were used to detect proteomic changes following chronic exposure to moderate/low doses of radiation in adults and normally developed Medaka fish (<i>Oryzias latipes</i>). Significant variations in the abundance of proteins involved in thyroid hormone signaling and lipid metabolism were detected, which could be related to the gonadal regression phenotype observed after 21.04 mGy and 204.3 mGy/day exposure. The global proteomic change was towards overexpression of proteins in muscle and skin, while the opposite effect was observed in internal organs. The present study provides information on the impacts of biologically relevant low doses of IR, which will be useful in future research for the identification of potential biomarkers of IR exposure and allow for a better assessment of radiation biosafety regulations.
DOI: 10.6084/m9.figshare.15124368.v2
title: Effects of chronic exposure to low levels of IR on Medaka (<i>Oryzias latipes</i>): a proteomic and bioinformatic approach

description: Chronic exposure to ionizing radiation (IR) at low doses (&lt;100 mGy) has been insufficiently studied to understand fully the risk to health. Relatively little knowledge exists regarding how species and healthy tissues respond at the protein level to chronic exposure to low doses of IR, and mass spectrometric-based profiling of protein expression is a powerful tool for studying changes in protein abundance. SDS gel electrophoresis, LC-MS/MS mass spectrometry-based approaches and bioinformatic data analytics were used to detect proteomic changes following chronic exposure to moderate/low doses of radiation in adults and normally developed Medaka fish (<i>Oryzias latipes</i>). Significant variations in the abundance of proteins involved in thyroid hormone signaling and lipid metabolism were detected, which could be related to the gonadal regression phenotype observed after 21.04 mGy and 204.3 mGy/day exposure. The global proteomic change was towards overexpression of proteins in muscle and skin, while the opposite effect was observed in internal organs. The present study provides information on the impacts of biologically relevant low doses of IR, which will be useful in future research for the identification of potential biomarkers of IR exposure and allow for a better assessment of radiation biosafety regulations.
DOI: 10.6084/m9.figshare.15179012.v1
title: Evidence of the Early Holocene eruptive activity of Volcán de Colima and the 8.2 kyr global climatic event in lacustrine sediments from a debris avalanche-dammed lake

description: Table S1. Major and trace elements of the Gypsum King sequence
DOI: 10.6084/m9.figshare.15179012
title: Evidence of the Early Holocene eruptive activity of Volcán de Colima and the 8.2 kyr global climatic event in lacustrine sediments from a debris avalanche-dammed lake

description: Table S1. Major and trace elements of the Gypsum King sequence
DOI: 10.6084/m9.figshare.14617449
title: Clinical profiles and genetic spectra of 814 Chinese children with short stature

description: Supplementary Material from Clinical profiles and genetic spectra of 814 Chinese children with short stature <br>
DOI: 10.6084/m9.figshare.14617449.v7
title: Clinical profiles and genetic spectra of 814 Chinese children with short stature

description: Supplementary Material from Clinical profiles and genetic spectra of 814 Chinese children with short stature <br>
DOI: 10.5281/zenodo.5140059
title: Extension of the Action Verb Corpus (AVCext)

description: Extension of the Action Verb Corpus (AVCext) The extension to the Action Verb Corpus consists of 41 recordings conducted by 2 users experienced with the system performing the same three actions as in AVC — <strong>take</strong> (208 instances), <strong>put</strong> (208 instances), and <strong>push</strong> (91 instances). The actions were performed without any instructions. The focus of the extension is to facilitate action recognition. In comparison to AVC, no speech-related information is annotated in the extension dataset. The other ELAN annotations available with AVC are also available for the extension dataset. Additionally, the <strong>actions are annotated in two degrees of granularity. Coarse labels are: take, put and push. Fine labels split the motion into more granular motion primitives: reach, grab, moveObject, and place.</strong> These annotations are available as eaf (ELAN) files, csv files and as two separate columns in the Merged files. Details about the collected data can be found in Matthias Hirschmanner, Stephanie Gross, Brigitte Krenn, Friedrich Neubarth, Martin Trapp and Markus Vincze: Extension of the Action Verb Corpus for Supervised Learning. ARW 2018. The dataset consists of the following information: the merged output of the hand and object trackers (AVCExtension_Merged.zip, one csv file per episode/recording) HandID: 0 right, 1 left FingerID: 0 thumb, 1 index, 2 middle, 3 ring, 4 pinky BoneID: 0 metacarpal, 1 proximal, 2 intermediate, 3 distal the output of the object trackers, including the object poses and their reliability estimate calculated by the object tracker, whether an object is touched by or is in the hand of the instructor and whether the object touches the table, for the coordinate system applied see picture "coord_system.png (AVCExtension_Objects.zip, one csv file per episode/recording), the videos from Leap Motion showing the hand movements and objects<br> (AVCExtension_video_libm.zip, one avi file per episode/recording), animation of the merged hand and object tracking<br> (AVCExtension_video_schematic.zip, one avi file per episode/recording), the following list of annotations synchronized with the real-time animation of the hand and object tracking (available as ELAN files AVCExtension_Annotations_eaf.zip, and csv files AVCExtension_Annotations_csv.zip, one file per episode/recording) information which object is currently moved, and where it is moved to (automatically annotated), information whether a hand touches a particular object (manually annotated), information whether a particular object touches the ground/table (automatically annotated), coarse-grained annotation: take, put, push (manually annotated), fine-grained annotation: reach, grab, moveObject, and place (manually annotated), position of the objects in the scene (automatically calculated from output of object tracker) Acknowledgments Corpus creation and annotation was supported by the WWTF project RALLI. The dataset was recorded at ACIN, TUW.
DOI: 10.5281/zenodo.5140058
title: Extension of the Action Verb Corpus (AVCext)

description: Extension of the Action Verb Corpus (AVCext) The extension to the Action Verb Corpus consists of 41 recordings conducted by 2 users experienced with the system performing the same three actions as in AVC — <strong>take</strong> (208 instances), <strong>put</strong> (208 instances), and <strong>push</strong> (91 instances). The actions were performed without any instructions. The focus of the extension is to facilitate action recognition. In comparison to AVC, no speech-related information is annotated in the extension dataset. The other ELAN annotations available with AVC are also available for the extension dataset. Additionally, the <strong>actions are annotated in two degrees of granularity. Coarse labels are: take, put and push. Fine labels split the motion into more granular motion primitives: reach, grab, moveObject, and place.</strong> These annotations are available as eaf (ELAN) files, csv files and as two separate columns in the Merged files. Details about the collected data can be found in Matthias Hirschmanner, Stephanie Gross, Brigitte Krenn, Friedrich Neubarth, Martin Trapp and Markus Vincze: Extension of the Action Verb Corpus for Supervised Learning. ARW 2018. The dataset consists of the following information: the merged output of the hand and object trackers (AVCExtension_Merged.zip, one csv file per episode/recording) HandID: 0 right, 1 left FingerID: 0 thumb, 1 index, 2 middle, 3 ring, 4 pinky BoneID: 0 metacarpal, 1 proximal, 2 intermediate, 3 distal the output of the object trackers, including the object poses and their reliability estimate calculated by the object tracker, whether an object is touched by or is in the hand of the instructor and whether the object touches the table, for the coordinate system applied see picture "coord_system.png (AVCExtension_Objects.zip, one csv file per episode/recording), the videos from Leap Motion showing the hand movements and objects<br> (AVCExtension_video_libm.zip, one avi file per episode/recording), animation of the merged hand and object tracking<br> (AVCExtension_video_schematic.zip, one avi file per episode/recording), the following list of annotations synchronized with the real-time animation of the hand and object tracking (available as ELAN files AVCExtension_Annotations_eaf.zip, and csv files AVCExtension_Annotations_csv.zip, one file per episode/recording) information which object is currently moved, and where it is moved to (automatically annotated), information whether a hand touches a particular object (manually annotated), information whether a particular object touches the ground/table (automatically annotated), coarse-grained annotation: take, put, push (manually annotated), fine-grained annotation: reach, grab, moveObject, and place (manually annotated), position of the objects in the scene (automatically calculated from output of object tracker) Acknowledgments Corpus creation and annotation was supported by the WWTF project RALLI. The dataset was recorded at ACIN, TUW.
DOI: 10.34740/kaggle/dsv/2533559
title: Dutch News Articles
DOI: 10.6084/m9.figshare.15179031
title: parental engagement data.csv

description: This is a small longitudinal data set relating to teachers' perceptions of parental engagement before and during the COVID-19 pandemic. The data collected using online surveys of teachers at one large English primary school.
DOI: 10.6084/m9.figshare.15179031.v1
title: parental engagement data.csv

description: This is a small longitudinal data set relating to teachers' perceptions of parental engagement before and during the COVID-19 pandemic. The data collected using online surveys of teachers at one large English primary school.
DOI: 10.17028/rd.lboro.15179043
title: Supplementary Information Files for An advanced empirical model for quantifying the impact of heat and climate change on human physical work capacity

description: Supplementary Information Files for An advanced empirical model for quantifying the impact of heat and climate change on human physical work capacity<br>Occupational heat stress directly hampers physical work capacity (PWC), with large economic consequences for industries and regions vulnerable to global warming. Accurately quantifying PWC is essential for forecasting impacts of different climate change scenarios, but the current state of knowledge is limited, leading to potential underestimations in mild heat, and overestimations in extreme heat. We therefore developed advanced empirical equations for PWC based on 338 work sessions in climatic chambers (low air movement, no solar radiation) spanning mild to extreme heat stress. Equations for PWC are available based on air temperature and humidity, for a suite of heat stress assessment metrics, and mean skin temperature. Our models are highly sensitive to mild heat and to our knowledge are the first to include empirical data across the full range of warm and hot environments possible with future climate change across the world. Using wet bulb globe temperature (WBGT) as an example, we noted 10% reductions in PWC at mild heat stress (WBGT = 18°C) and reductions of 78% in the most extreme conditions (WBGT = 40°C). Of the different heat stress indices available, the heat index was the best predictor of group level PWC (R2 = 0.96) but can only be applied in shaded conditions. The skin temperature, but not internal/core temperature, was a strong predictor of PWC (R2 = 0.88), thermal sensation (R2 = 0.84), and thermal comfort (R2 = 0.73). The models presented apply to occupational workloads and can be used in climate projection models to predict economic and social consequences of climate change.<br>
DOI: 10.17028/rd.lboro.15179043.v1
title: Supplementary Information Files for An advanced empirical model for quantifying the impact of heat and climate change on human physical work capacity

description: Supplementary Information Files for An advanced empirical model for quantifying the impact of heat and climate change on human physical work capacity<br>Occupational heat stress directly hampers physical work capacity (PWC), with large economic consequences for industries and regions vulnerable to global warming. Accurately quantifying PWC is essential for forecasting impacts of different climate change scenarios, but the current state of knowledge is limited, leading to potential underestimations in mild heat, and overestimations in extreme heat. We therefore developed advanced empirical equations for PWC based on 338 work sessions in climatic chambers (low air movement, no solar radiation) spanning mild to extreme heat stress. Equations for PWC are available based on air temperature and humidity, for a suite of heat stress assessment metrics, and mean skin temperature. Our models are highly sensitive to mild heat and to our knowledge are the first to include empirical data across the full range of warm and hot environments possible with future climate change across the world. Using wet bulb globe temperature (WBGT) as an example, we noted 10% reductions in PWC at mild heat stress (WBGT = 18°C) and reductions of 78% in the most extreme conditions (WBGT = 40°C). Of the different heat stress indices available, the heat index was the best predictor of group level PWC (R2 = 0.96) but can only be applied in shaded conditions. The skin temperature, but not internal/core temperature, was a strong predictor of PWC (R2 = 0.88), thermal sensation (R2 = 0.84), and thermal comfort (R2 = 0.73). The models presented apply to occupational workloads and can be used in climate projection models to predict economic and social consequences of climate change.<br>
DOI: 10.5281/zenodo.5006524
title: Stocktaking GO FAIR Discovery IN - Use cases, infrastructure

description: In order to build a better ecosystem for data discovery tools the Data Discovery Implementation Group of GO Fair (https://www.go-fair.org/implementation-networks/overview/discovery) collected use cases between 2019 and 2020 from a variety of sources. We also detail the ‘Actors’ for these use cases and the ‘Source’ providing links, whenever possible. Since we found over a hundred individual use cases, we decided to cluster them to provide a better overview. The clustering, as well as the results of a small survey among data infrastructure specialists to find how they rate the importance of the clusters are detailed in the documentation to this dataset, a draft of which can currently be found here. The code and data to produce the figures in the documentation are available as R code in the GO_FAIR_Discovery_Use_case-master.zip file. The use cases themselves are available as Excel sheet and csv.
description: Funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) as part of NFDI - 442494171
DOI: 10.15468/kpn7pc
title: Petrocosmea duyunensis (Gesneriaceae), a new species from Guizhou, China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Tang, Sheng-Hu, Yang *, Jia-Wen, Li, Cong-Rui, Zhou, Qing (2021): Petrocosmea duyunensis (Gesneriaceae), a new species from Guizhou, China. PhytoKeys 181: 1-8, DOI: http://dx.doi.org/10.3897/phytokeys.181.68635, URL: http://dx.doi.org/10.3897/phytokeys.181.68635