cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/srjbf468mf.1
title: A framework to create customised LHC analyses within CheckMATE

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract Checkmate  is a framework that allows the user to conveniently test simulated BSM physics events against current LHC data in order to derive exclusion limits. For this purpose, the data runs through a detector simulation and is then processed by a user chosen selection of experimental analyses. These analyses are all defined by signal regions that can be compared to the experimental data with a multitude of statistical tools. Due to the large and continuously growing number of experimental a... Title of program: CheckMATE, AnalysisManager Catalogue Id: AEUT_v1_1 Nature of problem The LHC has delivered a wealth of new data that is now being analysed. Both ATLAS and CMS have performed many searches for new physics that theorists are eager to test their model against. However, tuning the detector simulations, understanding the particular analysis details and interpreting the results can be a tedious and repetitive task. Furthermore, new analyses are being constantly published by the experiments and might be not yet included in the official CheckMATE distribution. Versions of this program held in the CPC repository in Mendeley Data AEUT_v1_0; CheckMATE; 10.1016/j.cpc.2014.10.018 AEUT_v1_1; CheckMATE, AnalysisManager; 10.1016/j.cpc.2015.06.002
DOI: 10.17632/6zyr73d62r.1
title: LieART—A Mathematica application for Lie algebras and representation theory

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract We present the Mathematica application “LieART” (Lie Algebras and Representation Theory) for computations frequently encountered in Lie algebras and representation theory, such as tensor product decomposition and subalgebra branching of irreducible representations. LieART can handle all classical and exceptional Lie algebras. It computes root systems of Lie algebras, weight systems and several other properties of irreducible representations. LieART’s user interface has been created with a st... Title of program: LieART Catalogue Id: AEVL_v1_0 Nature of problem The use of Lie algebras and their representations is widespread in physics, especially in particle physics. The description of nature in terms of gauge theories requires the assignment of fields to representations of compact Lie groups and their Lie algebas. Mass and interaction terms in the Lagrangian give rise to the need for computing tensor products of representations of Lie algebras. The mechanism of spontaneous symmetry breaking leads to the application of subalgebra decomposition. This co ... Versions of this program held in the CPC repository in Mendeley Data AEVL_v1_0; LieART; 10.1016/j.cpc.2014.12.023 AEVL_v1_0; LieART; 10.1016/j.cpc.2014.12.023
DOI: 10.17632/mcgc3636xr.1
title: DualSPHysics: Open-source parallel CFD solver based on Smoothed Particle Hydrodynamics (SPH)

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract DualSPHysics is a hardware accelerated Smoothed Particle Hydrodynamics code developed to solve free-surface flow problems. DualSPHysics is an open-source code developed and released under the terms of GNU General Public License (GPLv3). Along with the source code, a complete documentation that makes easy the compilation and execution of the source files is also distributed. The code has been shown to be efficient and reliable. The parallel power computing of Graphics Computing Units (GPUs) is... Title of program: DualSPHysics Catalogue Id: AEUS_v1_0 Nature of problem The DualSPHysics code has been developed to study free-surface flows requiring high computational cost. Versions of this program held in the CPC repository in Mendeley Data AEUS_v1_0; DualSPHysics; 10.1016/j.cpc.2014.10.004
DOI: 10.5281/zenodo.2593351
title: Large scale experiments for an alternative erosion control measure using sand-filled geosystems. Data set produced at the CIEM flume, Hydralab+

description: Sand-filled geosystems have the potential to mimic aspects of natural and nature-based features that can enhance the resilience of coastal areas challenged by climate, with additional (structural) reinforcement.
Knowledge gaps can be identified. For instance, (i) the sediment transport mechanisms around the geosystem; (ii) the amount of erosion in the leeside when the system is overtopped; (iii) quantitative contribution the geosystem for the wave overtopping reduction; and (iv) failure mechanisms of the geosystem under extreme conditions. Specific tests are proposed in order to fill the defined knowledge gap and answer the following research questions:

How do nearshore coastal processes (wave transformation, sediment transport) and wave structure interactions during extreme events differ from those during more usual big storm conditions for situations with and without the geosystem?
How do feedbacks between the hydrodynamics and morphology of natural and nature-based features affect flooding, erosion, and recovery of coastal areas when erosion is limited by the 'geosystem'?
How to conceive a dynamic coastal protection that can easily adapt to climate change in areas experiencing coastal squeeze (i.e. dense urban environment and human infrastructure with sea encroaching land) and vulnerable to coastal erosion and flooding risks?

The set of experiments, done at the large wave Flume (CIEM) in Barcelona, are here described in order to answer the previous questions. These experiments started on October 2018 and ended at the end of November 2018. These tests include different configurations:<br>an initial benchmark tests in order to test the wave conditions were no geosystem protection is used, a second layout with a geotube used as a geosystem protection and finally a third layout were geobags are used as a protection.
DOI: 10.5281/zenodo.2593352
title: Large scale experiments for an alternative erosion control measure using sand-filled geosystems. Data set produced at the CIEM flume, Hydralab+

description: Sand-filled geosystems have the potential to mimic aspects of natural and nature-based features that can enhance the resilience of coastal areas challenged by climate, with additional (structural) reinforcement.
Knowledge gaps can be identified. For instance, (i) the sediment transport mechanisms around the geosystem; (ii) the amount of erosion in the leeside when the system is overtopped; (iii) quantitative contribution the geosystem for the wave overtopping reduction; and (iv) failure mechanisms of the geosystem under extreme conditions. Specific tests are proposed in order to fill the defined knowledge gap and answer the following research questions:

How do nearshore coastal processes (wave transformation, sediment transport) and wave structure interactions during extreme events differ from those during more usual big storm conditions for situations with and without the geosystem?
How do feedbacks between the hydrodynamics and morphology of natural and nature-based features affect flooding, erosion, and recovery of coastal areas when erosion is limited by the 'geosystem'?
How to conceive a dynamic coastal protection that can easily adapt to climate change in areas experiencing coastal squeeze (i.e. dense urban environment and human infrastructure with sea encroaching land) and vulnerable to coastal erosion and flooding risks?

The set of experiments, done at the large wave Flume (CIEM) in Barcelona, are here described in order to answer the previous questions. These experiments started on October 2018 and ended at the end of November 2018. These tests include different configurations:<br>an initial benchmark tests in order to test the wave conditions were no geosystem protection is used, a second layout with a geotube used as a geosystem protection and finally a third layout were geobags are used as a protection.
DOI: 10.17632/483x8sgtww.1
title: ROOT — A C++ framework for petabyte data storage, statistical analysis and visualization

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract A new stable version (“production version”) v5.28.00 of ROOT [1] has been published [2]. It features several major improvements in many areas, most noteworthy data storage performance as well as statistics and graphics features. Some of these improvements have already been predicted in the original publication Antcheva et al. (2009) [3]. This version will be maintained for at least 6 months; new minor revisions (“patch releases”) will be published [4] to solve problems reported with this vers... Title of program: ROOT Catalogue Id: AEFA_v2_0 Nature of problem Storage, analysis and visualization of scientific data Versions of this program held in the CPC repository in Mendeley Data AEFA_v1_0; ROOT; 10.1016/j.cpc.2009.08.005 AEFA_v2_0; ROOT; 10.1016/j.cpc.2011.02.008
DOI: 10.17632/6kwj722z3x.1
title: Stochastic hyperfine interactions modeling library—Version 2

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract The stochastic hyperfine interactions modeling library (SHIML) provides a set of routines to assist in the development and application of stochastic models of hyperfine interactions. The library provides routines written in the C programming language that (1) read a text description of a model for fluctuating hyperfine fields, (2) set up the Blume matrix, upon which the evolution operator of the system depends, and (3) find the eigenvalues and eigenvectors of the Blume matrix so that theoreti... Title of program: SHIML Catalogue Id: AEIF_v2_0 Nature of problem In condensed matter systems, hyperfine methods such as nuclear magnetic resonance (NMR), Mössbauer effect (ME), muon spin rotation (ΜSR), and perturbed angular correlation spectroscopy (PAC) measure electromagnetic fields due to electronic and magnetic structure within Angstroms of nuclear probes through the hyperfine interaction. When interactions fluctuate at rates comparable to the time scale of a hyperfine method, there is a loss in signal coherence, and spectra in the time domain are damped ... Versions of this program held in the CPC repository in Mendeley Data AEIF_v1_0; SHIML; 10.1016/j.cpc.2010.12.042 AEIF_v2_0; SHIML; 10.1016/j.cpc.2015.10.013
DOI: 10.17632/7gsbgbt9xp.1
title: A finite-element toolbox for the stationary Gross–Pitaevskii equation with rotation

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract We present a new numerical system using classical finite elements with mesh adaptivity for computing stationary solutions of the Gross–Pitaevskii equation. The programs are written as a toolbox for FreeFem++ (www.freefem.org), a free finite-element software available for all existing operating systems. This offers the advantage to hide all technical issues related to the implementation of the finite element method, allowing to easily code various numerical algorithms. Two robust and optimized... Title of program: GPFEM Catalogue Id: AFBD_v1_0 Nature of problem The software computes 2D or 3D stationary solutions of the Gross-Pitaevskii equation with rotation. The main application is the computation of different types of vortex states (Abrikosov vortex lattice, giant vortex) in rotating Bose Einstein condensates. The software can be easily modified to take into account different related physical models. Versions of this program held in the CPC repository in Mendeley Data AFBD_v1_0; GPFEM; 10.1016/j.cpc.2016.07.034
DOI: 10.17632/968j4y2mzf.1
title: Dr TIM: Ray-tracer TIM, with additional specialist scientific capabilities

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract We describe several extensions to TIM, a raytracing program for ray-optics research. These include relativistic raytracing; simulation of the external appearance of Eaton lenses, Luneburg lenses and generalised focusing gradient-index lens (GGRIN) lenses, which are types of perfect imaging devices; raytracing through interfaces between spaces with different optical metrics; and refraction with generalised confocal lenslet arrays, which are particularly versatile METATOYs. Title of program: TIM Catalogue Id: AEKY_v2_0 Nature of problem Visualisation of scenes that include scene objects that create wave-optically forbidden light-ray fields Versions of this program held in the CPC repository in Mendeley Data AEKY_v1_0; TIM; 10.1016/j.cpc.2011.11.011 AEKY_v2_0; TIM; 10.1016/j.cpc.2013.10.031
DOI: 10.17632/nrwhtdw5b3.1
title: Data for: The support of constructs in thesaurus tools from a Semantic Web perspective: framework to assess standard conformance. Construct Suite.

description: Suite of tests. Each test is described with: - Test number - Test description under ISO 2788 - Test description under ISO 25964 - Possible results for that test, with its semantics
DOI: 10.17632/sypyt6c2mc.1
title: Data for: A systematic review showed no performance benefit of machine learning over logistic regression for clinical prediction models

description: The uploaded files are: 1) Excel file containing 6 sheets in respective Order: "Data Extraction" (summarized final data extractions from the three reviewers involved), "Comparison Data" (data related to the comparisons investigated), "Paper level data" (summaries at paper level), "Outcome Event Data" (information with respect to number of events for every outcome investigated within a paper), "Tuning Classification" (data related to the manner of hyperparameter tuning of Machine Learning Algorithms). 2) R script used for the Analysis (In order to read the data, please: Save "Comparison Data", "Paper level data", "Outcome Event Data" Excel sheets as txt files. In the R script srpap: Refers to the "Paper level data" sheet, srevents: Refers to the "Outcome Event Data" sheet and srcompx: Refers to " Comparison data Sheet". 3) Supplementary Material: Including Search String, Tables of data, Figures 4) PRISMA checklist items
DOI: 10.5517/ccdc.csd.cc21wcp0
title: CCDC 1903142: Experimental Crystal Structure Determination

description: Related Article: Brian W. Skelton, Murray V. Baker, Alison G. Barnes|2019|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/9bgmc3n4dg.1
title: New developments in FeynCalc 9.0

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract In this note we report on the new version of FeynCalc, a Mathematica package for symbolic semi-automatic evaluation of Feynman diagrams and algebraic expressions in quantum field theory. The main features of version 9.0 are: improved tensor reduction and partial fractioning of loop integrals, new functions for using FeynCalc together with tools for reduction of scalar loop integrals using integration-by-parts (IBP) identities, better interface to FeynArts and support for S U ( N ) generators ... Title of program: FeynCalc Catalogue Id: AFBB_v1_0 Nature of problem Symbolic semi-automatic evaluation of Feynman diagrams and algebraic expressions in quantum field theory. Versions of this program held in the CPC repository in Mendeley Data AFBB_v1_0; FeynCalc; 10.1016/j.cpc.2016.06.008
DOI: 10.17632/9d9dd5vvsc.1
title: A-Track: A new approach for detection of moving objects in FITS images

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract We have developed a fast, open-source, cross-platform pipeline, called A-Track, for detecting the moving objects (asteroids and comets) in sequential telescope images in FITS format. The pipeline is coded in Python 3. The moving objects are detected using a modified line detection algorithm, called MILD. We tested the pipeline on astronomical data acquired by an SI-1100 CCD with a 1-meter telescope. We found that A-Track performs very well in terms of detection efficiency, stability, and proc... Title of program: A-TRACK Catalogue Id: AFBC_v1_0 Nature of problem Asteroid and comet detection. Versions of this program held in the CPC repository in Mendeley Data AFBC_v1_0; A-TRACK; 10.1016/j.cpc.2016.07.023
DOI: 10.17632/f3dx2rrg8v.1
title: CoFlame: A refined and validated numerical algorithm for modeling sooting laminar coflow diffusion flames

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract Mitigation of soot emissions from combustion devices is a global concern. For example, recent EURO 6 regulations for vehicles have placed stringent limits on soot emissions. In order to allow design engineers to achieve the goal of reduced soot emissions, they must have the tools to so. Due to the complex nature of soot formation, which includes growth and oxidation, detailed numerical models are required to gain fundamental insights into the mechanisms of soot formation. A detailed descripti... Title of program: CoFlame Catalogue Id: AFAU_v1_0 Nature of problem Soot formation in laminar diffusion flames with detailed description of thermdynamics, kinetic, and transport data Versions of this program held in the CPC repository in Mendeley Data AFAU_v1_0; CoFlame; 10.1016/j.cpc.2016.06.016
DOI: 10.17632/kyvkxfw24b.1
title: MAGE (M-file/Mif Automatic GEnerator): A graphical interface tool for automatic generation of Object Oriented Micromagnetic Framework configuration files and Matlab scripts for results analysis

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract We present a tool for fully-automated generation of both simulations configuration files (Mif) and Matlab scripts for automated data analysis, dedicated for Object Oriented Micromagnetic Framework (OOMMF). We introduce extended graphical user interface (GUI) that allows for fast, error-proof and easy creation of Mifs, without any programming skills usually required for manual Mif writing necessary. With MAGE we provide OOMMF extensions for complementing it by mangetoresistance and spin-transf... Title of program: MAGE (Mif/M-file Automatic GEnerator) Catalogue Id: AFAZ_v1_0 Nature of problem Numerous problems of ferromagnetic nanoelements can be investigated with micromagnetic simulations using The Object Oriented MicroMagnetic Framework (OOMMF). Often, research requires continuous parameters and condition changes while running a large number of simulations with time-varying parameters, which means that the user has to be experienced with programming and that a lot of time has to be spent on creating numerous expanded Mifs. What is more, after the simulations are finished, the analy ... Versions of this program held in the CPC repository in Mendeley Data AFAZ_v1_0; MAGE (Mif/M-file Automatic GEnerator); 10.1016/j.cpc.2016.06.021
DOI: 10.17632/tzvtpjzknk.1
title: A finite-temperature Hartree–Fock code for shell-model Hamiltonians

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract The codes HFgradZ.py and HFgradT.py find axially symmetric minima of a Hartree–Fock energy functional for a Hamiltonian supplied in a shell model basis. The functional to be minimized is the Hartree–Fock energy for zero-temperature properties or the Hartree–Fock grand potential for finite-temperature properties (thermal energy, entropy). The minimization may be subjected to additional constraints besides axial symmetry and nucleon numbers. A single-particle operator can be used to constrain t... Title of program: HFgradZ.py, HFgradT.py Catalogue Id: AFAX_v1_0 Nature of problem Find Hartree-Fock minima of shell-model Hamiltonians Versions of this program held in the CPC repository in Mendeley Data AFAX_v1_0; HFgradZ.py, HFgradT.py; 10.1016/j.cpc.2016.06.023
DOI: 10.5281/zenodo.2593817
title: Mining Rule Violations in JavaScript Code Snippets

description: <strong>Content of this repository</strong><br>
This is the repository that contains the scripts and dataset for the MSR 2019 mining challenge

Github Repository with the software used : here.<br>
=======

<strong>DATASET</strong><br>
The dataset was retrived utilizing google bigquery and dumped to a csv<br>
file for further processing, this original file with no treatment is called jsanswers.csv, here we can find the following information :<br>
1. The Id of the question (PostId)<br>
2. The Content (in this case the code block)<br>
3. the lenght of the code block<br>
4. the line count of the code block<br>
5. The score of the post<br>
6. The title

A quick look at this files, one can notice that a postID can have multiple rows related to it, that's how multiple codeblocks are saved in the database.

<strong>Filtered Dataset:</strong>

<strong>Extracting code from CSV</strong><br>
We used a python script called "ExtractCodeFromCSV.py" to extract the code from the original csv and merge all the codeblocks in their respective javascript file with the postID as name, this resulted in 336 thousand files.

<strong>Running ESlint</strong><br>
Due to the single threaded nature of ESlint, we needed to create a script to run ESlint because it took a huge toll on the machine to run it on 336 thousand files, this script is named "ESlintRunnerScript.py", it splits the files in 20 evenly distributed parts and runs 20 processes of esLinter to generate the reports, as such it generates 20 json files.

<strong>Number of Violations per Rule</strong><br>
This information was extracted using the script named "parser.py", it generated the file named "NumberofViolationsPerRule.csv" which contains the number of violations per rule used in the linter configuration in the dataset.

<strong>Number of violations per Category</strong><br>
As a way to make relevant statistics of the dataset, we generated the number of violations per rule category as defined in the eslinter website, this information was extracted using the same "parser.py" script.

<strong>Individual Reports</strong><br>
This information was extracted from the json reports, it's a csv file with PostID and violations per rule.

<strong>Rules</strong><br>
The file Rules with categories contains all the rules used and their categories.