cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17611/dp/18673619
title: Global ShakeMovie synthetic for December 29, 2020 MW 5.9 CENTRAL MID-ATLANTIC RIDGE
DOI: 10.17611/dp/18678201
title: Global ShakeMovie synthetic for December 27, 2020 MW 5.6 TURKEY
DOI: 10.17611/dp/18678205
title: Global ShakeMovie synthetic for December 28, 2020 MW 5.2 SOUTHERN MOLUCCA SEA
DOI: 10.17611/dp/18678209
title: Global ShakeMovie synthetic for January 03, 2021 MW 6.1 ANDREANOF ISLANDS, ALEUTIAN IS.
DOI: 10.17611/dp/18679626
title: Global ShakeMovie synthetic for January 04, 2021 MW 5.1 SOUTH SANDWICH ISLANDS REGION
DOI: 10.17611/dp/18682532
title: Global ShakeMovie synthetic for January 06, 2021 MW 6.3 KERMADEC ISLANDS REGION
DOI: 10.17611/dp/18682536
title: Global ShakeMovie synthetic for January 06, 2021 MW 5.8 SOLOMON ISLANDS
DOI: 10.17611/dp/18682540
title: Global ShakeMovie synthetic for January 06, 2021 MW 5.6 SOUTHERN SUMATRA, INDONESIA
DOI: 10.17611/dp/18682544
title: Global ShakeMovie synthetic for January 06, 2021 MW 6.2 MINAHASSA PENINSULA, SULAWESI
DOI: 10.15468/dl.vpkq5a
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Syngonium podophyllum",
 "Country is Seychelles",
 "HasCoordinate is true"
 ]
}

 The dataset includes 18 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027448-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17611/dp/18685191
title: Global ShakeMovie synthetic for January 08, 2021 MW 6.3 KERMADEC ISLANDS, NEW ZEALAND
DOI: 10.17611/dp/18685195
title: Global ShakeMovie synthetic for January 08, 2021 MW 6.1 VANUATU ISLANDS
DOI: 10.17611/dp/18685870
title: Global ShakeMovie synthetic for January 09, 2021 MW 5.5 VANUATU ISLANDS
DOI: 10.17611/dp/18685874
title: Global ShakeMovie synthetic for January 10, 2021 MW 6.1 SALTA PROVINCE, ARGENTINA
DOI: 10.17611/dp/18685878
title: Global ShakeMovie synthetic for January 10, 2021 MW 6.1 VANUATU ISLANDS
DOI: 10.17611/dp/18685882
title: Global ShakeMovie synthetic for January 10, 2021 MW 5.6 SOUTHERN EAST PACIFIC RISE
DOI: 10.17611/dp/18685946
title: Global ShakeMovie synthetic for January 11, 2021 MW 5.7 FLORES SEA
DOI: 10.17611/dp/18685950
title: Global ShakeMovie synthetic for January 11, 2021 MW 5.3 BALLENY ISLANDS REGION
DOI: 10.17611/dp/18685954
title: Global ShakeMovie synthetic for January 11, 2021 MW 5.5 AZORES ISLANDS, PORTUGAL
DOI: 10.17611/dp/18685958
title: Global ShakeMovie synthetic for January 11, 2021 MW 5.5 EAST OF SOUTH SANDWICH ISLANDS
DOI: 10.17611/dp/18685962
title: Global ShakeMovie synthetic for January 11, 2021 MW 6.8 RUSSIA-MONGOLIA BORDER REGION
DOI: 10.17611/dp/18696528
title: Global ShakeMovie synthetic for January 12, 2021 MW 6.0 EASTERN SEA OF JAPAN
DOI: 10.17611/dp/18696532
title: Global ShakeMovie synthetic for January 12, 2021 MW 6.0 IRIAN JAYA REGION, INDONESIA
DOI: 10.17611/dp/18697280
title: Global ShakeMovie synthetic for January 14, 2021 MW 5.7 SULAWESI, INDONESIA
DOI: 10.17611/dp/18697284
title: Global ShakeMovie synthetic for January 14, 2021 MW 6.3 SULAWESI, INDONESIA
DOI: 10.5281/zenodo.16916829
title: Dataset of preprocessed NII- and DTI-derived metrics from patients with ME/CFS and health controls with sedentary lifestyles

description: We provided the dataset of preprocessed diffusion-based neuroinflammation imaging (NII) and diffusion tensor imaging (DTI) derived metrics [NII-derived hindered water ratio (NII-HR), NII-derived hindered fraction of restricted isotropic diffusion (NII-RF), NII-derived fibre fraction (NII-FF), NII-derived axial diffusivity (NII-AD), NII-derived radial diffusivity (NII-RD), NII-derived mean diffusivity (NII-MD), NII-derived fractional anisotropy (NII-FA), DTI-derived fractional anisotropy (DTI-FA), DTI-derived mean diffusivity (DTI-MD), DTI-derived axial diffusivity (DTI-AD), and DTI-derived radial diffusivity (DTI-RD)] from 67 patients with Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS), and 67 healthy controls (HCs) with sedentary lifestyles. The dataset can be used to replicate the results of the manuscript titled “Evidence of white matter neuroinflammation in myalgic encephalomyelitis/chronic fatigue syndrome: a diffusion-based neuroinflammation imaging study”. This manuscript investigated white matter neuroinflammation in ME/CFS using NII and their correlation with clinical symptoms. Details of data collection and processing can be found in the manuscript. The demographic and symptom scores were provided in the spreadsheet. Elenven subject-level datasets were determined:

1.           NII_HR.nii: preprocessed NII-derived hindered water ratio;

2.           NII_RF.nii: preprocessed NII-derived hindered fraction of restricted isotropic diffusion;

3.           NII_FF.nii: preprocessed NII-derived fibre fraction;

4.           NII_AD.nii: preprocessed NII-derived axial diffusivity;

5.           NII_RD.nii: preprocessed NII-derived radial diffusivity;

6.           NII_MD.nii: preprocessed NII-derived mean diffusivity;

7.           NII_FA.nii: preprocessed NII-derived fractional anisotropy;

8.           DTI_AD.nii.gz: preprocessed DTI-derived axial diffusivity;

9.           DTI_RD.nii.gz: preprocessed DTI-derived radial diffusivity;

10.        DTI_FA.nii.gz: preprocessed DTI-derived fractional anisotropy;

11.        DTI_MD.nii.gz: preprocessed DTI-derived mean diffusivity.
DOI: 10.5281/zenodo.16916830
title: Dataset of preprocessed NII- and DTI-derived metrics from patients with ME/CFS and health controls with sedentary lifestyles

description: We provided the dataset of preprocessed diffusion-based neuroinflammation imaging (NII) and diffusion tensor imaging (DTI) derived metrics [NII-derived hindered water ratio (NII-HR), NII-derived hindered fraction of restricted isotropic diffusion (NII-RF), NII-derived fibre fraction (NII-FF), NII-derived axial diffusivity (NII-AD), NII-derived radial diffusivity (NII-RD), NII-derived mean diffusivity (NII-MD), NII-derived fractional anisotropy (NII-FA), DTI-derived fractional anisotropy (DTI-FA), DTI-derived mean diffusivity (DTI-MD), DTI-derived axial diffusivity (DTI-AD), and DTI-derived radial diffusivity (DTI-RD)] from 67 patients with Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS), and 67 healthy controls (HCs) with sedentary lifestyles. The dataset can be used to replicate the results of the manuscript titled “Evidence of white matter neuroinflammation in myalgic encephalomyelitis/chronic fatigue syndrome: a diffusion-based neuroinflammation imaging study”. This manuscript investigated white matter neuroinflammation in ME/CFS using NII and their correlation with clinical symptoms. Details of data collection and processing can be found in the manuscript. The demographic and symptom scores were provided in the spreadsheet. Elenven subject-level datasets were determined:

1.           NII_HR.nii: preprocessed NII-derived hindered water ratio;

2.           NII_RF.nii: preprocessed NII-derived hindered fraction of restricted isotropic diffusion;

3.           NII_FF.nii: preprocessed NII-derived fibre fraction;

4.           NII_AD.nii: preprocessed NII-derived axial diffusivity;

5.           NII_RD.nii: preprocessed NII-derived radial diffusivity;

6.           NII_MD.nii: preprocessed NII-derived mean diffusivity;

7.           NII_FA.nii: preprocessed NII-derived fractional anisotropy;

8.           DTI_AD.nii.gz: preprocessed DTI-derived axial diffusivity;

9.           DTI_RD.nii.gz: preprocessed DTI-derived radial diffusivity;

10.        DTI_FA.nii.gz: preprocessed DTI-derived fractional anisotropy;

11.        DTI_MD.nii.gz: preprocessed DTI-derived mean diffusivity.
DOI: 10.17611/dp/18698032
title: Global ShakeMovie synthetic for January 15, 2021 MW 5.5 SOUTHERN MID-ATLANTIC RIDGE
DOI: 10.17611/dp/18698036
title: Global ShakeMovie synthetic for January 15, 2021 MW 5.8 OFF COAST OF CHIAPAS, MEXICO
DOI: 10.17611/dp/18702969
title: Global ShakeMovie synthetic for January 15, 2021 MW 5.4 SOUTHERN IRAN
DOI: 10.17611/dp/18702973
title: Global ShakeMovie synthetic for January 16, 2021 MW 5.6 HINDU KUSH REGION, AFGHANISTAN
DOI: 10.17611/dp/18707090
title: Global ShakeMovie synthetic for January 19, 2021 MW 6.5 SAN JUAN PROVINCE, ARGENTINA
DOI: 10.17611/dp/18713086
title: Global ShakeMovie synthetic for January 20, 2021 MW 5.6 SEA OF OKHOTSK
DOI: 10.17611/dp/18717753
title: Global ShakeMovie synthetic for January 20, 2021 MW 5.5 NEAR COAST OF PERU
DOI: 10.17611/dp/18717757
title: Global ShakeMovie synthetic for January 21, 2021 MW 7.0 PHILIPPINE ISLANDS REGION
DOI: 10.17611/dp/18731173
title: Global ShakeMovie synthetic for January 23, 2021 MW 5.6 SOUTH OF FIJI ISLANDS
DOI: 10.17611/dp/18731177
title: Global ShakeMovie synthetic for January 23, 2021 MW 5.9 EASTERN NEW GUINEA REG., P.N.G.
DOI: 10.17611/dp/18731181
title: Global ShakeMovie synthetic for January 23, 2021 MW 5.7 EASTERN NEW GUINEA REG., P.N.G.
DOI: 10.17611/dp/18731185
title: Global ShakeMovie synthetic for January 23, 2021 MW 6.9 SOUTH SHETLAND ISLANDS
DOI: 10.15468/dl.a6cyxf
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pseudocrenilabrus philander (Weber, 1897)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((15.6372 -28.0032,16.2782 -28.5786,20.509 -28.5786,20.509 -24.0715,15.4933 -24.0715,15.4945 -24.1257,16.0509 -25.6631,15.6372 -28.0032))"
 ]
}

 The dataset includes 40 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021820-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.442haf
title: Occurrence Download

description: A dataset containing 189 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melocactus pruinosus Werderm."
 ]
}

 The dataset includes 189 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021819-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.7q341
title: Data from: Consistency and variation in phenotypic selection exerted by a community of seed predators

description: Phenotypic selection that is sustained over time underlies both anagenesis
 and cladogenesis, but the conditions that lead to such selection and what
 causes variation in selection are not well known. We measured the
 selection exerted by three species of predispersal seed predators of
 lodgepole pine (Pinus contorta latifolia) in the South Hills, Idaho and
 found that net selection on different cone and seed traits exerted by red
 crossbills (Loxia curvirostra) and cone borer moths (Eucosma recissoriana)
 over 10 years of seed crops was similar to that measured in another
 mountain range. We also found that the strength of selection increased as
 seed predation increased, which provides a mechanism for the correlation
 between the escalation of seed defenses and the density of seed predators.
 Red crossbills consume the most seeds and selection they exert accounts
 for much of the selection experienced by lodgepole pine, providing
 additional support for a coevolutionary arms race between crossbills and
 lodgepole pine in the South Hills. The third seed predator, hairy
 woodpeckers (Picoides villosus), consumed less than one-sixth as many
 seeds as crossbills. Across the northern Rocky Mountains, woodpecker
 abundance and therefore selective impact appears limited by the elevated
 seed defenses of lodgepole pine.
description: SeedPredationDataForSouthHillsThe data represent for 87 trees their mean cone traits and the percent of seeds eaten from a sample of cones by each of 3 seed predators. I used JMP software to estimate tree means.SeedPredationDataForDryad.xlsMothPredationLittleRockyMtnsThe file contains data on the percent of seeds eaten by moths and the mean cone traits of 34 lodgepole pine trees.WoodpeckerDensitiesVsConeTraitsThis file contains the mean densities of Hairy Woodpeckers and the mean ratio of seed mass to cone mass in seven mountain ranges as well as whether or not Pine suqirrels (Tamiasciurus hudsonicus) are present (1) or absent (0).
DOI: 10.5061/dryad.r2rc8
title: Data from: Competitors and predators alter settlement patterns and reproductive success of an intraguild prey

description: The spatial distribution of predators is affected by intra- and
 interspecific interactions within the predator guild. Studying these
 interactions under fluctuating food availability, while taking habitat
 characteristics into account, offers a quasi-experimental set up to
 determine the relative impact of con- and heterospecifics on reproductive
 success of predators. We analyzed the settlement decisions and
 reproductive success of Eurasian pygmy owls (Glaucidium passerinum) in the
 presence of both breeding conspecifics and their competitor and intraguild
 predator, Tengmalm's owls (Aegolius funereus), under fluctuating
 abundance of their primary prey (voles). We used detailed data, collected
 across 11 years in a large study area (1300 km²), on the spatial and
 temporal variation of habitat characteristics in all available nesting
 sites, local densities of both species, and vole abundance. We found that
 pygmy owls strongly avoided breeding close to conspecifics but did not
 avoid Tengmalm's owl nests. Nest box occupation of pygmy owls was
 positively correlated to the proportion of old spruce, mature and old pine
 forests and farmlands, and occupation probability was higher at high vole
 abundance and in areas occupied in previous years. Pygmy owl avoidance of
 conspecifics decreased when voles were abundant. At high conspecific
 density, pygmy owls showed lower hatching success and delayed hatching
 date, in agreement with the observed spatial avoidance. Finally, even
 though breeding pygmy owls did not spatially avoid Tengmalm's owls,
 the density of heterospecifics correlated with low hatching and fledging
 success in pygmy owls. This suggests short term fitness costs when living
 close to competitors, even when lethal effects of intraguild interactions
 are subtle. Our results suggest that joint costs of exploitative and
 interference competition by Tengmalm's owls, as well as intraguild
 predation, were lower than those induced by intraspecific competition
 only. This result might be due to the similar body size between the
 species considered, Tengmalm's owls being only twice as large as
 pygmy owls. Interactions among con- and heterospecifics can therefore
 modify the spatial settlement and reproductive success of individuals on a
 landscape scale, also within the predator guild.
description: Data_Breeding_PygmyOwlData on pygmy owl breeding success according to habitat characteristics, prey abundance and both conspecifics and Tengmalm's owl densities. See the Read Me file for details.
DOI: 10.5061/dryad.5p1h6
title: Data from: Telomere attrition and growth: a life-history framework and case study in common terns

description: The relationship between growth and age-specific telomere length, as a
 proxy of somatic state, is increasingly investigated, but observed
 patterns vary and a predictive framework is lacking. We outline
 expectations based on the assumption that telomere maintenance is costly
 and argue that individual heterogeneity in resource acquisition is
 predicted to lead to positive covariance between growth and telomere
 length. However, canalization of resource allocation to the trait with a
 larger effect on fitness, rendering that trait relatively invariant, can
 cause the absence of covariance. In a case study of common tern (Sterna
 hirundo) chicks, in which hatching order is the main determinant of
 variation in resource acquisition within broods, we find that body mass,
 but not telomere length or attrition, varies with hatching order.
 Moreover, body mass and growth positively predict survival to fledging,
 whereas telomere length and attrition do not. Using a novel statistical
 method to quantify standardized variance in plasticity, we estimate
 between-individual variation in telomere attrition to be only 12% of that
 of growth. Consistent with the relative invariance of telomere attrition,
 we find no correlation between age-specific body mass or growth and
 telomere attrition. We suggest that common tern chicks prioritize
 investment in long-term somatic state (as indicated by canalization of
 telomere maintenance) over immediate survival benefits of growth as part
 of an efficient brood reduction strategy that benefits the parents. As
 such, inter-specific variation in the growth-telomere length relationship
 may be explained by the extent to which parents benefit from rapid
 mortality of excess offspring.
description: Common tern chick
 telomere lengthsTelomere length, body
 mass, sex, hatching order, brood size and fledging success for common tern
 chicks measured in 2013 and 2014, at an age of 3 and 20
 days.data
 for Dryad.xlsx
DOI: 10.5061/dryad.675tt
title: Data from: Parallelism in the oxygen transport system of the lake whitefish: the role of physiological divergence in ecological speciation

description: In North America, populations of lake whitefish (Coregonus clupeaformis)
 have evolved sympatric “dwarf” and “normal” ecotypes that are associated
 with distinct trophic niches within lakes. Trophic specialization should
 place diverging physiological demands on individuals; thus, genes and
 phenotypes associated with energy production represent ideal candidates
 for studies of adaptation. Here, we test for parallelism in physiological
 traits involved in oxygen transport in lake whitefish from Québec, Canada,
 and Maine, USA. We observed significant divergence in red blood cell (RBC)
 morphology between the ecotypes, with dwarfs exhibiting larger nuclei and
 a higher nucleus area:total cell area than normal whitefish in all of the
 lakes examined. In addition, isoelectric focusing gels revealed hemoglobin
 protein component variation in the whitefish. While dwarf and normal
 whitefish exhibited a similar number of hemoglobin protein components, the
 composition of these components differed, with dwarf whitefish bearing a
 higher proportion of cathodic components compared to the normals. We also
 observed parallel divergence in hemoglobin gene expression in the brains
 of dwarf and normal whitefish, with dwarf whitefish exhibiting significant
 hemoglobin gene upregulation. Together, our results show that metabolic
 traits involved in oxygen transport have diverged between the whitefish
 ecotypes and the strong parallelism observed across lakes implicates
 ecologically driven selection pressures. We discuss the function of these
 traits in relation to the differing trophic niches occupied by the
 whitefish and the potential contributions of trait plasticity and genetic
 divergence to energetic adaptation.
description: rbc
 sizeRed blood cell nucleus
 area, total cell area, and nucleus to total cell area ratios in dwarf and
 normal lake whitefish from three lakes. Fifty red blood cells were
 measured for each individual and the values reported represent mean
 estimates.hemoglobin proteins_lake
 whitefishSummary of hemoglobin
 protein component variation in dwarf and normal lake whitefish from three
 lakeshemoglobin phenotypes_lake
 whitefish.xlsbhmg
 expression_geneticsSummary of alpha and
 beta hemoglobin gene expression in the kidney, brain, and gill tissues of
 dwarf and normal lake whitefish from four lakes. Also reported is the SNP
 genotype for each of the whitefish at locus 1544-242.
DOI: 10.5061/dryad.36td2
title: Data from: Effects of genotype on rates of substitution during experimental evolution

description: Rates of molecular evolution may vary widely between populations, yet the
 causes of this variation are still incompletely understood. Genetic
 differences between populations may make an important contribution to
 variation in rates of evolution, owing to differences in fitness,
 population size, mutation rates, or in the distribution of fitness effects
 (DFE) of available beneficial mutations. By whole genome sequencing of
 Escherichia coli populations experimentally evolved in the presence of a
 quinolone antibiotic, we found that rates of substitution varied by
 genotype, with evidence for a contribution from a genotype’s starting
 fitness. Subsequent targeted sequencing showed that genotypes with high
 average substitution rates were more likely to undergo the simultaneous
 fixation of several mutations, consistent with theoretical models of
 multiple mutation dynamics. Moreover, patterns of substitution were
 indicative of epistatic relationships between known resistance mutations.
description: Fitness_evolvedCompetitive fitness measurements for 46 evolved populations of Escherichia coli. Three replicate fitness assays were performed for each population. Founding genotypes are also indicated, as are numbers of high confidence substitutions (hc_fixed), polymorphisms (hc_poly), and total number of mutations (hc_total, the sum of hc_fixed and hc_poly).MICMeasurements of ciprofloxacin resistance for all strains and populations used in this study. Resistance is measured as the minimal inhibitory concentration (MIC), the concentration of antibiotic required to inhibit growth by 90% in an overnight culture. MIC is given both in absolute terms (ng/mL cup) and in terms of fold-increase over the susceptible ancestor MG1655.Data_by_progenitorData on progenitor strains and summaries for evolved populations by progenitor. See readme file for details.Mutation dataTable S1 from paper. All mutations found in whole genome sequencing of evolved populations.TableS1.xlsx
DOI: 10.5061/dryad.4462q
title: Data from: Soil management shapes ecosystem service provision and trade-offs in agricultural landscapes

description: Agroecosystems are principally managed to maximize food provisioning even
 if they receive a large array of supporting and regulating ecosystem
 services (ESs). Hence, comprehensive studies investigating the effects of
 local management and landscape composition on the provision of and
 trade-offs between multiple ESs are urgently needed. We explored the
 effects of conservation tillage, nitrogen fertilization and landscape
 composition on six ESs (crop production, disease control, soil fertility,
 water quality regulation, weed and pest control) in winter cereals.
 Conservation tillage enhanced soil fertility and pest control, decreased
 water quality regulation and weed control, without affecting crop
 production and disease control. Fertilization only influenced crop
 production by increasing grain yield. Landscape intensification reduced
 the provision of disease and pest control. We also found tillage and
 landscape composition to interactively affect water quality regulation and
 weed control. Under N fertilization, conventional tillage resulted in more
 trade-offs between ESs than conservation tillage. Our results demonstrate
 that soil management and landscape composition affect the provision of
 several ESs and that soil management potentially shapes the trade-offs
 between them
description: Data regarding the paper
 "Soil management shapes ecosystem service provision and trade-offs in
 agricultural landscapes" (Tamburini et al. 2016)The excel file contains
 data regarding 1) landscape composition, 2) grain yield, 3) disease
 incidence 4) soil organic matter content, 5) phosphorus saturation, 6)
 weed species richness and cover, 7) predator abundance, 8) aphid abundance
 and parasitism rate.Tamburini et al.
 data.xlsx