cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25919/5cb6101fd7419
title: Parkes observations for project P455 semester 2018OCTS_11

description: This project is to continue timing and profile studies of the first double-pulsar system, a unique laboratory for gravitational physics. Recent results, including the first measurements of higher-order light-propagation effects and of the relativistic deformation of the orbit, highlight the importance of a long term observational campaign for this remarkable system. The main aims of this proposal are to provide the strongest tests to date for general relativity and to measure for the first time the moment-of-inertia of a neutron star. Additionally, we will determine the system geometry and map the pulsar beams via geodetic precession. Whenever possible, we will exploit the high sensitivity of the new UWL receiver.
DOI: 10.5063/f1nc5zgw
title: Regional salmon weight derived from commercial catch data, Alaska, 1975-2016

description: This dataset utilizes commercial catch data (Alaska Department of Fish and Game, Commercial Fisheries Entry Commission. Commercial salmon harvest data: gross earnings and number of fish, Alaska, 1975-2016. Knowledge Network for Biocomplexity. doi:10.5063/F1T151XN) to estimate salmon weight by region, species, and year in Alaska. Regions correspond to the 13 regions used in the State of Alaska's Salmon and People (SASAP) project. These regions do not match up exactly with Alaska Department of Fish and Game regulatory regions, thus both an area and district level dataset from the original dataset were utilized in order to separate some areas into SASAP regions. Missing values in the derived dataset indicate either that there was not a commercial fishery in that region for that species/year, or that the commercial fishery data is confidential. Confidential data is especially problematic in the northern regions (Yukon, Norton Sound, Kotzebue), since there is only one processor that operates in this area during recent years, and according to ADF&amp;G confidentiality rules, data from a year where only one processor operated in an area must be kept confidential. Included in this dataset is the derived weights file, an R Markdown document which calculates the weight data, and two lookup tables used in the aggregation process.
DOI: 10.5281/zenodo.2642677
title: Supplementary Table 1

description: The table describes the subject characteristics between prediabetic/T2D men and women before and after exercise intervention.
DOI: 10.5281/zenodo.2642678
title: Supplementary Table 1

description: The table describes the subject characteristics between prediabetic/T2D men and women before and after exercise intervention.
DOI: 10.17632/sh8c5cbk4v.1
title: Data for: Blastic Plasmacytoid Dendritic Cell Neoplasm (BPDCN) in leukemic phase, with atypical immunophenotype and without skin lesions. A diagnostic and management challenge.

description: blastic plasmacytoid dendritic cell neoplasm
DOI: 10.14455/isec.res.2019.192
title: CAUSES OF DEVIATIONS IN PROJECT EXECUTION AND THEIR EFFECTS

description: Over the past few years the German and Austrian construction industries have been confronted with increasing complexity in projects, a situation, which has resulted in a significantly higher number of construction claims. The lack of an effective documentation system and a standardized claim management system has led to a growing number of disputes and legal cases. To develop a standardized claim management system, it is essential to understand and analyze deviations in the asplanned vs. the as-built occurring during project execution. A standardized system may assist in the quantification of impacts of different deviations and change procedures in future projects. This paper focuses on deviations and their effects occurring during project execution, as well as possible disputes arising from them. Further research is necessary in order to develop an effective standardized claim management system.
DOI: 10.23721/1503710
title: Cyber Threat Indicators (2016-01-01 to 2018-12-31)

description: In 2016 DHS began the Automated Indicator Sharing (AIS) initiative. Through AIS, DHS enables the exchange of cyber threat indicators in a machine-readable (XML) format between the Federal Government and the private sector. Threat indicators are pieces of information like malicious IP addresses or the sender address of a phishing email (although they can also be much more complicated).

Organizations sharing indicators use the Traffic Light Protocol (TLP) (https://www.us-cert.gov/tlp) to mark the indicators for sensitivity and control how widely they can be shared. While AIS exchanges TLP White, Green, and Amber indicators, the indicators available on this site are just the ones marked TLP White from CY16 through CY18. If you are interested in receiving all the AIS indicators and in near-real-time as they are exchanged, more information on how to directly participate in AIS is available at https://www.us-cert.gov/ais. 

The AIS indicators available on this site are in the Structured Threat Information Expression (STIX) version 1.1 XML format. Additional information about STIX 1.x can be found at https://stixproject.github.io/, while specific AIS field information is documented at https://www.us-cert.gov/sites/default/files/ais_files/AIS_Submission_Guidance_Appendix_A.pdf.
DOI: 10.23721/1503711
title: Cyber Threat Indicators CY18 (2018-01-01 to 2018-12-31)

description: AIS STIX Profile (https://www.us-cert.gov/sites/default/files/ais_files/AIS_Submission_Guidance_Appendix_A.pdf).
DOI: 10.14455/isec.res.2018.148
title: FINITE ELEMENT ANALYSIS OF HYBRID COLD-FORMED STEEL SHEAR WALL PANELS

description: Improving the lateral performance of cold formed steel systems by employing different sheathing materials and bracing systems has been of particular interest to researchers in these days. However, due to their relatively low seismic capacity, the need for higher shear resistance of these structural systems is still felt. Therefore, this study aims to propose three hybrid shear wall panels in order to provide better performance and higher resistance in seismic zones. The numerical method is verified based on the experimental results in the literature and then is used for evaluating the hybrid systems. The proposed walls are analyzed under lateral and vertical loads and then their performances are compared to each other. The results showed better performance and higher shear capacity for hybrid wall system compared to the ordinary cold formed steel shear wall. In addition, the strength to weight ratio approved the economic application of hybrid panels for high seismic regions.
DOI: 10.14455/isec.res.2019.193
title: CONTENTS UNDER PRESSURE: DISTINGUISHING IMPREGNATED FIRE-RETARDANT-TREATED WOOD FROM SURFACE-APPLIED TREATMENTS IN THE 2018 INTERNATIONAL BUILDING CODE

description: Increasing populations combined with decreasing developable plots are leading to higher real estate prices. Communities are attempting to address these higher prices by increasing the number of residential units per acre. One way to increase supply is to use fire-retardant-treated wood (FRTW) to build larger and taller structures. However, as FRTW is increasingly being used, so are substitute products that do not meet the definition of FRTW in the building codes. How does one distinguish the two? By relying on knowing how FRTW is manufactured, where it can be used, and on building code requirements, responsible parties will better understand why FRTW is different from these products and how to verify that only code-compliant, chemically impregnated FRTW is used in larger, taller structures.
DOI: 10.14455/isec.res.2019.194
title: GLOBALIZATION AND THE CONSTRUCTION ENGINEERING AND MANAGEMENT EDUCATION

description: Globalization is the study of dramatic global changes and their consequences in different fields of economy, technology and communications during the past two to three decades. Similar to other industry sectors or professional practices, globalization has enabled the construction industry to take advantage of cross-border markets and benefit from the opportunities that the globalized economy has provided. Advances in transportation, data sharing and communication have given construction professionals and the labor force unprecedented access to markets that were previously insulated. As the political borders have turned to be increasingly irrelevant and the national economies have become more interdependent, the socio-cultural differences are hence accentuated and further exposed due to historically-existing dissimilarities in societal cultures and business norms. In this paper, the main goal is to understand the globalization and its implications for the world economy specifically focusing on the construction industry. This paper studies the impacts of globalization in construction engineering and management profession and further investigates on the opportunities and threats that a globalized economy and more-synchronized business practices will bring for industry and how Construction Engineering educators shall successfully address those unprecedented issues in teaching Construction Engineering Management courses to the next generation of the industry leaders.
DOI: 10.14455/isec.res.2019.195
title: PERIODIC BOLT PLACEMENT IN STEEL STRUCTURES FOR GUIDED DAMAGE DETECTION

description: Connections form the weakest link in structural systems. Bolted connections are especially susceptible to stress corrosion cracking due to stress-riser points at the bolt edges and the intrusion of water between plates leading to galvanic corrosion. Bolts are conventionally placed based on minimum and maximum spacing requirements guided by American Institute of Steel Construction. Unfortunately, the detectability of crack and corrosion is currently not a design variable. In this study, bolts are placed in periodic pattern such that they exhibit unique frequency response. The periodic placement allows modeling only unit cell in the shape of hexagon with periodic boundary conditions to obtain the frequency response. When damage occurs, the periodic pattern is broken, and the frequency response behavior changes. The influence of crack to vibration modes is numerically modeled, and the damage detection ability with unique bolt placement is demonstrated. It is shown that the spatial distribution of bolt can assist the damage detection ability, which should be considered as a criterion in the design of bolted connections.
DOI: 10.25919/5cb6ab567715b
title: Parkes observations for project P456 semester 2018OCTS_47

description: The Parkes Pulsar Timing Array (PPTA) project has three primary goals: (a) detection of gravitational waves from astronomical sources, (b) establishment of a pulsar timescale, and (c) improvement of our understanding of Solar-system dynamics. The PPTA is the oldest of three international pulsar timing groups. We have the smallest telescope and the smallest group, but the best measurements and the best results. Our bound on the strength of the incoherent gravitational wave background is the only bound which significantly constrains theoretical models. We have maintained our leading position because: we have the southern sky; we have a small but well-focussed group; we have the best-calibrated receivers; and we have been able to observe with an almost regular cadence of 15 to 20 days at three different wavelengths. With this proposal we aim to maintain our pre-eminent position in the field.

Unlike most observing proposals, this is a continuing proposal for which the observations will continue to improve bounds on ultra-low-frequency gravitational waves until they are finally detected. Continued Parkes observations will remain valuable at least until the first stage of the SKA is able to improve on our sensitivity and observing cadence. Even after the gravitational wave background is detected we will want to continue observations in support of the nascent field of gravitational wave astronomy!
DOI: 10.7284/130161
title: Multibeam Echosounder data collected during research cruise KM1801 using a Kongsberg EM122 instrument system onboard the platform RV Kilo Moana

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.5281/zenodo.2642128
title: Human With No Lysine Kinase 3 (WNK3); A Target Enabling Package

description: Kinases WNK1-4 regulate cation-chloride cotransporters via phosphorylation of SPAK and OSR1 and thereby control salt homeostasis, cell volume and blood pressure. Gain of function mutations in WNK kinases are found in Gordon’s hypertension syndrome suggesting the WNK pathway as a therapeutic target. WNK3 inhibition in particular has also been shown to reduce cerebral injury after Ischemic stroke. Here we present assays and crystal structures that define (i) the molecular basis for disease mutations; (ii) the multiple functional domains of WNK kinases and their protein interactions; (iii) the binding of small molecule kinase inhibitors and a potential allosteric pocket.
description: This document represents version 6 of the TEP datasheet and includes all updates on the project as of April 2019.  For more information about TEPs and the TEP Programme, please visit https://thesgc.org/tep.
DOI: 10.26182/5cb6add923ff3
title: Do facial impressions reflect a shared social reality?
DOI: 10.5063/f1hm56q3
title: Harvest of Salmon across Commercial, Subsistence, Personal Use, and Sport Fish sectors, Alaska, 1995-2016

description: This data represents harvest of salmon in Alaska across the commercial, subsistence, personal use, and sport fish sectors. Each of these harvest sectors has a distinct permitting system governed by different departments within the Alaska Department of Fish and Game (ADFG). Commercial harvest is regulated under the Commercial Entry Fishery Commission (CFEC), and refers to the harvest of fish for the purposes of selling them to another party. Subsistence harvest is regulated under the ADFG Subsistence Division, and refers to the harvest of fish for customary and traditional use. Whether use of a stock of fish is considered a "customary and traditional" use is determined by several factors, including length and consistency of use, seasonality, methods and means of harvest, geographic areas, means of handling, preparing, preserving, and storing, intergenerational transmission of knowledge and skills, distribution and exchange, and diversity of resources in an area. Personal use harvest is also governed by the ADFG Subsistence Division. The personal use fishery was created in response to the enactment of the state's subsistence priority law, which precluded some individuals from participating in customary and traditional subsistence fisheries because the stocks they fish are not classified as customary and traditional use stocks. Because the gear associated with the personal use fishery is distinct from the gear typically associated with the sport fishery, the personal use fishery was kept distinct from the sport fishery to prevent confusion amongst the public. More information on the personal use fishery can be found in the Alaska state regulations, Chapter 77 "Personal Use Fishery, Article 1” (5 AAC 77.001). Sport fish harvest is regulated under the ADFG Division of Sport Fish, and refers to the taking of or attempting to take for personal consumption, and not for sale or barter, a fish by hook and line either held in the hand or closely attended. These data are derived from four source datasets: Subsistence and Personal Use Harvest - https://knb.ecoinformatics.org/#view/urn:uuid:7e4586c0-9812-4355-8f3b-1445b9a8ca53 Commercial Harvest (CFEC) - https://knb.ecoinformatics.org/#view/urn:uuid:40473bde-9774-4581-aafb-5d2c3b4a70d1 Commercial Harvest(ADFG Annual Management Reports) - https://knb.ecoinformatics.org/#view/urn:uuid:31b421f3-c48c-473a-bc20-601c738b3a3c Sportfish Harvest - https://knb.ecoinformatics.org/#view/urn:uuid:6a6a530f-3660-424f-adab-c771d1c89a5d) The included .Rmd file sources files from these datasets, aggregates over regions to obtain total harvest by species and region, and merges data from all of the sectors into a single file (Harvest_All_Sectors.csv). The .Rmd file also creates basic plots of harvest by sector by region. An additional dataset of salmon weights (Tobias Schwoerer. Regional salmon weight derived from commercial catch data, Alaska, 1975-2016. Knowledge Network for Biocomplexity. doi:10.5063/F1NC5ZGW) is used to create the included figure showing Cook Inlet harvest.
DOI: 10.23721/1503718
title: Cyber Threat Indicators CY17 (2017-01-01 to 2017-12-31)

description: AIS STIX Profile (https://www.us-cert.gov/sites/default/files/ais_files/AIS_Submission_Guidance_Appendix_A.pdf).
DOI: 10.5281/zenodo.2642710
title: Cloud-Repro: Reproducible Workflow on a Public Cloud for Computational Fluid Dynamics

description: In a new effort to make our research transparent and reproducible by others, we developed a workflow to run computational studies on a public cloud. It uses Docker containers to create an image of the application software stack. We also adopt several tools that facilitate creating and managing virtual machines on compute nodes and submitting jobs to these nodes. The configuration files for these tools are part of an expanded "reproducibility package" that includes workflow definitions for cloud computing, in addition to input files and instructions. This facilitates re-creating the cloud environment to re-run the computations under the same conditions. The present Zenodo dataset contains all secondary data required to reproduce the figures of the manuscript ("Reproducible Workflow on a Public Cloud for Computational Fluid Dynamics") without running the CFD simulations again.
description: Corresponds to GitHub repository https://github.com/barbagroup/cloud-repro, plus secondary data files (not version-controlled). Funded by NSF Grant No. CCF-1747669.
DOI: 10.5281/zenodo.2642711
title: Cloud-Repro: Reproducible Workflow on a Public Cloud for Computational Fluid Dynamics

description: In a new effort to make our research transparent and reproducible by others, we developed a workflow to run computational studies on a public cloud. It uses Docker containers to create an image of the application software stack. We also adopt several tools that facilitate creating and managing virtual machines on compute nodes and submitting jobs to these nodes. The configuration files for these tools are part of an expanded "reproducibility package" that includes workflow definitions for cloud computing, in addition to input files and instructions. This facilitates re-creating the cloud environment to re-run the computations under the same conditions.

The present Zenodo dataset contains all secondary data required to reproduce the figures of the manuscript ("Reproducible Workflow on a Public Cloud for Computational Fluid Dynamics") without running the CFD simulations again.
description: Corresponds to GitHub repository https://github.com/barbagroup/cloud-repro, plus secondary data files (not version-controlled).

Funded by NSF Grant No. CCF-1747669.
DOI: 10.17632/4vyvfzzcd5.1
title: Data for: Assessment of range and quality of neck movement using a smartphone-based application

description: Study Design: This was a cross sectional study that had the objective of measuring the validity of using a smartphone-based application to measure range of motion (ROM) and smoothness (Jerkiness) of neck motion by comparing it with 3D-motion capture analysis. Summary of background data: Assessing human performance in a clinical setting can be challenging, as this requires the detection of subtle variations in movement and ROM with the naked eye. Research findings consistently demonstrate differences between clinical groups and healthy volunteers during standardized clinical tests but this is often done with the help of advanced research equipment. Methods: Thirty healthy volunteers participated in this study. A helmet fitted with markers for motion capture analysis and a smartphone were fastened to the head of the participants. The smartphone recorded data using a beta version of Balancy (MEDEI, Denmark). Assessments of full active movement in transverse and sagittal planes were performed. Recordings were made simultaneously with the camera system and the smartphone. An intraclass correlation was calculated to compare the outcomes from the different applications. Results: No difference was found between modalities when comparing measurements of jerkiness or ROM. An excellent intraclass correlation was found for the outcomes of the two modalities for ROM (ICC: 0.83 - 0.96) and jerkiness (ICC: 0.86 – 0.95). Conclusions: This study demonstrated that a smartphone-based application can be used to accurately measure ROM and jerkiness during neck movements. These results indicate the utility of using a smartphone-based application to assess neck movement in humans. The findings have implications for assessment of neck movement in research and clinical practice.
DOI: 10.5063/f1cv4g17
title: Commercial Fisheries Entry Commision Public Permit Database from 1975-2016

description: The Commercial Fisheries Entry Commision (CFEC) is an independent, autonomous agency of the State of Alaska which regulates entry into Alaska's commercial fisheries. The CFEC is committed to promoting conservation and sustained-yield management of Alaska's unique fishery resources and boosting economic stability among fishermen and their dependents. To ensure effective management of commercial fisheries, all vessels used for commercial fishing or related activities must be licensed by the CFEC. This includes fishing vessels, tenders, packers, processors, transporter vessels, and seine skiffs. The CFEC is responsible for leasing all commercial fishing permits including permits for limited-entry fisheries. Limited-entry fisheries include all state salmon fisheries, most herring fisheries, and various other fisheries. This dataset includes permit information of all state commercial fisheries between 1975 and 2016. Permit information includes fishery, permit type, permit holder name and address, dates of permit, vessel identification, and information on transferable nature of individual permits. The source of this permit information is various forms collected by CFEC including permit application, transfer requests, and address change forms. This dataset includes the public permit database from CFEC, in addition to figures derived from this database showing new entrants by region. The included RMarkdown and two lookup tables are used to generate these figures.
DOI: 10.25345/c55g99
title: MassIVE MSV000083698 - Standardization of PGC-LC-MS-based glycomics for sample specific glycotyping
title: This study combined the use of hydrolyzed dextran as an internal standard and Skyline software for post-acquisition normalization to reduce retention time and peak area technical variation in PGC-based glycan analyses. This approach allowed assignment of system-independent retention values that are applicable to typical PGC-based glycan separations and supported the construction of a library containing &gt;300 PGC-separated glycan structures with normalized glucose unit (GU) retention values.

The utility of this approach is demonstrated in two ways. First, to inform the search space for bioinformatically predicted but unobserved glycan structures, predictive models for two structural modifications, core-fucosylation and bisecting GlcNAc, were developed based on the GU library. Second, the applicability of this method for the analysis of complex biological samples is evidenced by the ability to discriminate between cell culture and tissue sample types by the normalized intensity of N-glycan structures alone. Overall, the methods and data described here are expected to support the future development of more automated approaches to glycan identification and quantitation.