cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5494626
title: Reproduction package for the publication 'New radiative loss curve from updates to collisional excitation in the low-density, optically thin plasmas in SPEX'

description: The following files can be used to reproduce the Figures and data from the paper <strong>New radiative loss curve from updates to collisional excitation in the low-density, optically thin plasmas in SPEX </strong>by L. Štofanová, J. Kaastra, M. Mehdipour, and J. de Plaa accepted to be publish in Section 12. Atomic, molecular, and nuclear data of Astronomy and Astrophysics (acceptance date - 27/06/2021).
description: {"references": ["\u0160tofanov\u00e1 et al. (2021)", "Stofanova et al. (2021)", "Stofanov\u00e1 et al. (2021)"]}
DOI: 10.5281/zenodo.5495791
title: Baikal Haplogrep Results

description: Baikal Haplogrep Results
DOI: 10.5281/zenodo.5495790
title: Baikal Haplogrep Results

description: Baikal Haplogrep Results
DOI: 10.5281/zenodo.5495823
title: Fighting COVID-19 with computational tools: an AI guided review of 17,000 studies - The CSCoV database.

description: CSCoV (Computational Studies about COVID-19) is a dataset containing COVID-19 related studies extracted from PubMed, bioRxiv, medRxiv, and arXiv, together with article and author related metrics obtained from Semantic Scholar (plus page views from bioRxiv and medRxiv). Using machine learning, the articles are categorized in six topics (Pharmacology, Genomics, Epidemiology, Healthcare, Clinical Medicine, Clinical Imaging) and prioritized. The database is periodically updated. Publication: TBA Files included in this release: cscov_05_2021.png: dataset statistics for the current CSCoV release. cscov_05_2021.tsv: CSCoV database. schema.json: metadata. cscov_05_2021.tar.gz: Doc2Vec and DeepWalk features used for the DL model Source code: https://github.com/SFB-KAUST/covid-review
DOI: 10.5066/p9gz9z56
title: Magnetotelluric Data from the Gabbs Valley Region, Nevada, 2020

description: This data set consists of 59 wideband magnetotelluric (MT) stations collected by the U.S. Geological Survey in July and August of 2020 as part of a 1-year project funded by the Energy Resources Program of the U.S. Geological Survey to demonstrate full crustal control on geothermal systems in the Great Basin. Each station had 5 components, 3 orthogonal magnetic induction coils and 2 horizontal orthogonal electric dipoles. Data were collected for an average of 18 hours on a repeating schedule of alternating sampling rates of 256 samples/second for 7 hours and 50 minutes and 4096 samples/second for 10 minutes. The schedules were set such that each station was recording the same schedule to allow for remote reference processing. Data were processed with a bounded-influence robust remote reference processing scheme (BIRRP v5.2.1, Chave and Thomson, 2004). Data quality is good for periods of 0.007 - 2048 with some noise in the higher periods and less robust estimates at the longer periods. Files included in this publication include measured electric- and magnetic-field time series (.h5 files) as well as estimated impedance and vertical-magnetic field transfer functions (.edi files). An image of the MT response is supplied (.png file) where the impedance tensor is plotted on the to two panels, the induction vectors in the middle panel (up is geographic North), and the phase tensor in the bottom panel (up is geographic North). The real induction vectors point towards strong conductors. Phase tensor ellipses align in the direction of electrical current flow and warmer color represents the subsurface becoming more conductive and cooler colors more resistive.
DOI: 10.5281/zenodo.5495834
title: Fighting COVID-19 with computational tools: an AI guided review of 17,000 studies - The CSCoV database.

description: CSCoV (Computational Studies about COVID-19) is a dataset containing COVID-19 related studies extracted from PubMed, bioRxiv, medRxiv, and arXiv, together with article and author related metrics obtained from Semantic Scholar (plus page views from bioRxiv and medRxiv). Using machine learning, the articles are categorized in six topics (Pharmacology, Genomics, Epidemiology, Healthcare, Clinical Medicine, Clinical Imaging) and prioritized. The database is periodically updated. Publication: TBA Files included in this release: cscov_07_2021.png: dataset statistics for the current CSCoV release. cscov_07_2021.tsv: CSCoV database. schema.json: metadata. cscov_07_2021.tar.gz: Doc2Vec and DeepWalk features used for the DL model Source code: https://github.com/SFB-KAUST/covid-review
DOI: 10.5281/zenodo.5495826
title: Training data for the component contribution method

description: Data files containing measured Gibbs free energies of reaction and formation (or electrostatic potential). This data is used by the component-contribution method to train the regression model that is used to estimate Gibbs free energies of many other biochemical reactions.
DOI: 10.5281/zenodo.3978439
title: Training data for the component contribution method

description: Data files containing measured Gibbs free energies of reaction and formation (or electrostatic potential). This data is used by the component-contribution method to train the regression model that is used to estimate Gibbs free energies of many other biochemical reactions.
DOI: 10.6084/m9.figshare.16587551.v1
title: Aqib et al Dataset.xlsx

description: The spreadsheet contains the basic data of the analysis of different herbal medicine preparations (HMs) of the most used in Punjab (Pakistan) for contamination with aflatoxins B1, B2, G1, G2, and total aflatoxins (B1 + B2 + G1 + G2). It also contains the consuption data of Punjabi children and adults of HMs on the basis of the common prescriptions. These data served as a basis the calculate the aflatoxin intake and to assess the heqlth risks related to HMs consumption
DOI: 10.15468/k4q9mn
title: A new species of Hoplodactylus (Reptilia: Pygopodidae) from the Takitimu Mountains, South Island, New Zealand

description: This dataset contains the digitized treatments in Plazi based on the original journal article Jewell, Tony R., Leschen, Richard A. B. (2004): A new species of Hoplodactylus (Reptilia: Pygopodidae) from the Takitimu Mountains, South Island, New Zealand. Zootaxa 792 (1): 1-11, DOI: 10.11646/zootaxa.792.1.1, URL: https://biotaxa.org/Zootaxa/article/view/zootaxa.792.1.1
DOI: 10.5517/ccdc.csd.cc28q9my
title: CCDC 2106810: Experimental Crystal Structure Determination

description: Related Article: S. Xingfang, C. Changbao, Y. Zuhang, Y. Zhou|2011|Youji Huaxue|31|2052|
DOI: 10.5517/ccdc.csd.cc28q9nz
title: CCDC 2106811: Experimental Crystal Structure Determination

description: Related Article: S. Xingfang, C. Changbao, Y. Zuhang, Y. Zhou|2011|Youji Huaxue|31|2052|
DOI: 10.5517/ccdc.csd.cc28qbs4
title: CCDC 2106846: Experimental Crystal Structure Determination

description: Related Article: L. Xin|2011|Nankai Daxue Xuebao,Ziran Kexueban|44|953|
DOI: 10.5517/ccdc.csd.cc28qbw7
title: CCDC 2106849: Experimental Crystal Structure Determination

description: Related Article: W. Huang, G. Su, C. Pan, J. Qin, H. Tang, X. Yi|2011|Guangxi Shifan Daxue Xuebao Ziran Kexueban|29|1038|
DOI: 10.5281/zenodo.5495840
title: Malayan kraits (Bungarus candidus) show affinity to anthropogenic structures in a human dominated landscape

description: Data, code, and supplemental materials for Hodges et al. (2021): Malayan kraits (<em>Bungarus candidus</em>) show affinity to anthropogenic structures in a human dominated landscape. Including: radio-telemetry movement data, camera trapping activity/behavior data, habitat use data, land-use shapefiles, and R scripts to reproduce analyses.
description: Research is supported by King Cobra Conservancy. We had ethical approval from the Suranaree University of Technology Ethics Committee, and all work was permitted by the National Research Council of Thailand (0002/27; 0402/4367).
DOI: 10.5281/zenodo.5495839
title: Malayan kraits (Bungarus candidus) show affinity to anthropogenic structures in a human dominated landscape

description: Data, code, and supplemental materials for Hodges et al. (2021): Malayan kraits (<em>Bungarus candidus</em>) show affinity to anthropogenic structures in a human dominated landscape. Including: radio-telemetry movement data, camera trapping activity/behavior data, habitat use data, land-use shapefiles, and R scripts to reproduce analyses.
description: Research is supported by King Cobra Conservancy. We had ethical approval from the Suranaree University of Technology Ethics Committee, and all work was permitted by the National Research Council of Thailand (0002/27; 0402/4367).
DOI: 10.25345/c51c3r
title: MassIVE MSV000088068 - Alison Hughes Thesis - Chapter 4: Abiotic Stress
title: Extracts from cultures of Dunaliella primolecta, Phaeodactylum tricornutum, and Nannochloropsis grown under varying salinity, NaCl, nitrate, and pH
DOI: 10.25345/c5wn9j
title: MassIVE MSV000088069 - Alison Hughes Thesis - Chapter 5: Effect of 405 nm on Microalgae
title: Extracts from Dunaliella primolecta, Nannochloropsis oculata, Phaeodactylum tricornutum, and Porphyridium cruentum grown under 405 nm and white light in MiicroPharos photobioreactors
DOI: 10.5066/p9fi4a0y
title: Landsat 8 Collection 2 cloud truth mask validation set

description: The U.S. Geological Survey (USGS) Earth Resources Observation and Science (EROS) Center in Sioux Falls, SD developed a cloud validation dataset from 48 unique Landsat 8 Collection 2 images. These images were selected at random from the Landsat 8 archive from various locations around the world. While these validation images were subjectively designed by a single analyst, they provide useful information for quantifying the accuracy of clouds flagged by various cloud masking algorithms. Each mask is provided in GeoTIFF format, and includes all bands from the original Landsat 8 Level-1 Collection 2 data product (COG GeoTIFF), and its associated Level-1 metadata (MTL.txt file). The interpretation for the pixel values in each cloud mask is as follows: Value Interpretation 0 Fill 128 Clear 192 Thin Cloud 255 Cloud The methodology used to create these masks is the same as in previous USGS Landsat cloud truth masks (http://doi.org/10.5066/F7251GDH). Pixels are marked as Cloud if the pixel contains opaque and clearly identifiable clouds. Pixels are marked as Thin Cloud if they contain clouds that are transparent or if their classification as cloud is uncertain. Pixels that contain clouds with less than 50% opacity, or which do not contain clouds at all, are marked as Clear. In some masks the borders around clouds have been dilated to encompass the edges around irregular clouds.
DOI: 10.6084/m9.figshare.14308017
title: Conjunctival and Corneal Fibrous Histiocytoma: Brief review

description: <b>Background:</b> Fibrous histiocytoma (FH), a mesenchymal tumour, usually have an orbital presentation. Rarely, FH in both benign and malignant forms have been reported at limbus and conjunctiva. Present narrative review was conducted to determine demographic profile, clinical presentation and management options for this rare tumour. <b>Methods:</b> PubMed database was searched to identify articles presenting with fibrous histiocytoma of conjunctiva, cornea and limbus. Data was tabulated for age of presentation, sex, eye involved, area of involvement, if tumor was benign or malignant, management and recurrences. <b>Results:</b> Total of 35 articles were selected, which included 42 cases, of which 27 were benign and 15 malignant. 25 cases showed presence of limbal FH, 12 conjunctival, 4 caruncular and 1 corneal FH. Mean age of presentation was 30.9 years with male preponderance (females-10, males-17) in benign FH while malignant FH presented with mean age of 44.5 years and sex distribution of 7 females and 8 males. 4 cases of benign FH showed recurrence, which required re-excision and immunotherapy, while recurrence in malignant FH was 60%, where 4 needed exenteration, 3 enucleation and 1 expired due to metastasis. <b>Conclusion:</b> FH is one of the rare ocular tumours of eye presenting usually at the limbus and conjunctiva and rarely cornea. Histopathological examination along with immunostaining has a definite role in the diagnosis. Surgical excision with tumour free margins is the corner stone of treatment. Recurrences in benign varieties need re-excision or immunotherapy, while malignant cases need aggressive surgical options like exenteration or enucleation.
DOI: 10.6084/m9.figshare.14308017.v1
title: Conjunctival and Corneal Fibrous Histiocytoma: Brief review

description: <b>Background:</b> Fibrous histiocytoma (FH), a mesenchymal tumour, usually have an orbital presentation. Rarely, FH in both benign and malignant forms have been reported at limbus and conjunctiva. Present narrative review was conducted to determine demographic profile, clinical presentation and management options for this rare tumour. <b>Methods:</b> PubMed database was searched to identify articles presenting with fibrous histiocytoma of conjunctiva, cornea and limbus. Data was tabulated for age of presentation, sex, eye involved, area of involvement, if tumor was benign or malignant, management and recurrences. <b>Results:</b> Total of 35 articles were selected, which included 42 cases, of which 27 were benign and 15 malignant. 25 cases showed presence of limbal FH, 12 conjunctival, 4 caruncular and 1 corneal FH. Mean age of presentation was 30.9 years with male preponderance (females-10, males-17) in benign FH while malignant FH presented with mean age of 44.5 years and sex distribution of 7 females and 8 males. 4 cases of benign FH showed recurrence, which required re-excision and immunotherapy, while recurrence in malignant FH was 60%, where 4 needed exenteration, 3 enucleation and 1 expired due to metastasis. <b>Conclusion:</b> FH is one of the rare ocular tumours of eye presenting usually at the limbus and conjunctiva and rarely cornea. Histopathological examination along with immunostaining has a definite role in the diagnosis. Surgical excision with tumour free margins is the corner stone of treatment. Recurrences in benign varieties need re-excision or immunotherapy, while malignant cases need aggressive surgical options like exenteration or enucleation.
DOI: 10.6084/m9.figshare.6203678.v2
title: Distribution, climatic relationships, and status of American pikas (<i>Ochotona princeps</i>) in the Great Basin, USA

description: To advance understanding of the distribution, climatic relationships, and status of American pikas (<i>Ochotona princeps</i>) in the Great Basin, United States, we compiled 2,387 records of extant pika sites surveyed since 2005, 89 records of documented extirpated sites (resurvey of historic sites), and 774 records of sites with old sign only. Extant sites extended across five degrees latitude and ten degrees longitude, encompassed six subregions, traversed forty mountain ranges, spanned 2,378 m in elevation (1,631–4,009 m), and comprised three of five currently described pika subspecies. A climate envelope for extant sites using the PRISM climate model expands the range of temperature and precipitation values that have been previously described. Extirpated and old-sign sites were mostly found within the geographic and climatic space of extant sites, but often in warmer and drier portions. Considerable overlap of extirpated, old, and extant groups within the same climate space suggests that nonclimatic factors have also contributed to population losses. The broad distribution and enlarged climate envelope of extant pika sites indicate that despite some localized extirpations, pika populations are persisting across Great Basin mountains, and appear to be able to tolerate a broader set of habitat conditions than previously understood.
DOI: 10.6084/m9.figshare.6798797.v1
title: Late Holocene ice-wedge polygon dynamics in northeastern Siberian coastal lowlands

description: Ice-wedge polygons are common features of northeastern Siberian lowland periglacial tundra landscapes. To deduce the formation and alternation of ice-wedge polygons in the Kolyma Delta and in the Indigirka Lowland, we studied shallow cores, up to 1.3 m deep, from polygon center and rim locations. The formation of well-developed low-center polygons with elevated rims and wet centers is shown by the beginning of peat accumulation, increased organic matter contents, and changes in vegetation cover from Poaceae-, <i>Alnus-</i>, and <i>Betula-</i>dominated pollen spectra to dominating Cyperaceae and <i>Botryoccocus</i> presence, and <i>Carex</i> and <i>Drepanocladus revolvens</i> macro-fossils. Tecamoebae data support such a change from wetland to open-water conditions in polygon centers by changes from dominating eurybiontic and sphagnobiontic to hydrobiontic species assemblages. The peat accumulation indicates low-center polygon formation and started between 2380 ± 30 and 1676 ± 32 years before present (BP) in the Kolyma Delta. We recorded an opposite change from open-water to wetland conditions because of rim degradation and consecutive high-center polygon formation in the Indigirka Lowland between 2144 ± 33 and 1632 ± 32 years BP. The late Holocene records of polygon landscape development reveal changes in local hydrology and soil moisture.
DOI: 10.6084/m9.figshare.6856538
title: An inventory of rock glaciers in the central British Columbia Coast Mountains, Canada, from high resolution Google Earth imagery

description: Little is known about the presence, distribution, age, or activity of rock glaciers in the British Columbia Coast Mountains of western Canada. Reflecting debris accumulation and mass wasting under a periglacial climate, these rock glaciers describe a geomorphic response to permafrost regimes that may or may not presently exist. An inventory of rock glacier landforms in the eastern front ranges of the Coast Mountains, using high-resolution Google Earth imagery, documented 165 rock glaciers between lat. 50°10ʹ and 52°08ʹ N. The majority of these rock glaciers occur at sites positioned between 1,900 and 2,300 m above sea level, where rain shadow effects and continental air masses result in persistent dry, cold conditions. Morphology and field observation suggest that these features contain intact ice. The rock glaciers occupy predominately northwest- to northeast-facing slopes, with talus-derived rock glaciers largely restricted to north-facing slopes. Glacier-derived features outnumber talus-derived features by a ratio of 5:1. Several of the inventoried rock glaciers were located up valley from presumed Younger Dryas terminal moraines, indicating that they formed after 9390 BP. Dendrogeomorphological investigations at one rock glacier record contemporary activity that resulted in 1.3 cm/yr of frontal advance since AD 1674. This inventory is the first to document the presence of rock glaciers in the Coast Mountains and supports preliminary understandings of permafrost distribution in the southwestern Canadian Cordillera.
DOI: 10.6084/m9.figshare.6294344.v1
title: Plant and soil P determine functional attributes of subalpine Australian plants

description: Replacement of phospholipids with phosphorus (P)-free lipids in cellular membranes has been identified as a mechanism facilitating fast rates of photosynthesis when phosphorus availability is limited. We measured photosynthetic rates, leaf and soil P fractions, and foliar membrane lipid compositions for five species (<i>Geranium antrorsum, Ranunculus graniticola, Poa costiniana, Poa hiemata</i>, and <i>Veronica derwentiana</i>) common to two Australian subalpine ecosystems of contrasting parent material to characterize the extent to which they have adapted to long-term P availability. Our results indicate limited tolerance to reduced P, albeit adaptation strategies differ among species. Under reduced P conditions, phospholipids were replaced in foliage by galactolipids and sulfolipids, but photosynthesis was still impaired owing to reduced stomatal conductance. Accumulation of antioxidants, including carotenoids and alpha-tocopherol, in leaves with limited P supply suggests oxidative stress. Our field study shows that while subalpine Australian plants of a variety of life forms adapt to P availability by replacing phospholipids with P-free lipids in foliar membranes, this adaptation is insufficient to fully mitigate the effects of reduced P on photosynthesis.
DOI: 10.6084/m9.figshare.6510104.v1
title: Reconstructing Greenland Ice Sheet meltwater discharge through the Watson River (1949–2017)

description: Ice-sheet melting is the primary water source for the proglacial Watson River in southern west Greenland. Discharge from the large, approximately 12,000 km<sup>2</sup> ice-sheet catchment draining through the Watson River has been monitored since 2006. While this record is of respectable length for a Greenland monitoring effort, it is too short to resolve climate signals. Therefore, we use observed Tasersiaq lake discharge and Kangerlussuaq air temperature to reconstruct annual Watson River discharge back to 1949. The resulting sixty-five-year record shows that average ice-sheet runoff since 2003 has roughly increased by 46 percent relative to the 1949–2002 period. The time series suggests that the five top-ranking discharge years occurred since 2003. The three top-ranking discharge years (2010, 2012, and 2016) are characterized by melt seasons that were both long and intense. Interannual variability more than doubled since 2003, which we speculate to be because of hypsometric runoff amplification enhanced by albedo decrease and decreased firn permeability. The reconstructed time series proves to be a valuable tool for long-term evaluation of Greenland Ice Sheet surface mass balance models. A comparison with freshwater fluxes calculated by a downscaled version of the regional climate model RACMO2 reveals high correlation (<i>r</i> = 0.89), and also shows that the model possibly underestimates runoff by up to 26 percent in above-average melt years.
DOI: 10.6084/m9.figshare.6856538.v3
title: An inventory of rock glaciers in the central British Columbia Coast Mountains, Canada, from high resolution Google Earth imagery

description: Little is known about the presence, distribution, age, or activity of rock glaciers in the British Columbia Coast Mountains of western Canada. Reflecting debris accumulation and mass wasting under a periglacial climate, these rock glaciers describe a geomorphic response to permafrost regimes that may or may not presently exist. An inventory of rock glacier landforms in the eastern front ranges of the Coast Mountains, using high-resolution Google Earth imagery, documented 165 rock glaciers between lat. 50°10ʹ and 52°08ʹ N. The majority of these rock glaciers occur at sites positioned between 1,900 and 2,300 m above sea level, where rain shadow effects and continental air masses result in persistent dry, cold conditions. Morphology and field observation suggest that these features contain intact ice. The rock glaciers occupy predominately northwest- to northeast-facing slopes, with talus-derived rock glaciers largely restricted to north-facing slopes. Glacier-derived features outnumber talus-derived features by a ratio of 5:1. Several of the inventoried rock glaciers were located up valley from presumed Younger Dryas terminal moraines, indicating that they formed after 9390 BP. Dendrogeomorphological investigations at one rock glacier record contemporary activity that resulted in 1.3 cm/yr of frontal advance since AD 1674. This inventory is the first to document the presence of rock glaciers in the Coast Mountains and supports preliminary understandings of permafrost distribution in the southwestern Canadian Cordillera.