cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.xqd4r2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Enteromius macrops, Enteromius macrotaenia, Enteromius magdalenae, Enteromius marmoratus, Enteromius martorelli, Enteromius matthesi, Enteromius mattozi, Enteromius mediosquamatus, Enteromius melanotaenia, Enteromius mimus, Enteromius miolepis, Enteromius mocoensis, Enteromius multilineatus, Enteromius musumbi, Enteromius neefi, Enteromius neglectus, Enteromius neumayeri, Enteromius nigeriensis, Enteromius nigrifilis, Enteromius nigroluteus, Enteromius niokoloensis, Enteromius nounensis, Enteromius nyanzae, Enteromius okae, Enteromius oligogrammus, Enteromius olivaceus, Enteromius owenae, Enteromius pallidus, Enteromius paludinosus, Enteromius papilio, Enteromius parablabes, Enteromius parajae, Enteromius pellegrini, Enteromius perince, Enteromius petchkovskyi, Enteromius pleurogramma, Enteromius pobeguini, Enteromius poechii, Enteromius prionacanthus, Enteromius profundus, Enteromius pseudotoppini, Enteromius pumilus, Enteromius punctitaeniatus, Enteromius pygmaeus, Enteromius quadralineatus, Enteromius quadrilineatus, Enteromius quadripunctatus, Enteromius raimbaulti, Enteromius rapax, Enteromius roussellei, Enteromius rouxi, Enteromius rubrostigma, Enteromius salessei, Enteromius serengetiensis, Enteromius sexradiatus, Enteromius seymouri, Enteromius stanleyi, Enteromius stauchi, Enteromius stigmatopygus, Enteromius subinensis, Enteromius sublineatus, Enteromius sylvaticus, Enteromius syntrechalepis, Enteromius taeniopleura, Enteromius taeniurus, Enteromius tanapelagius, Enteromius tegulifer, Enteromius tetraspilus, Enteromius tetrastigma, Enteromius teugelsi, Enteromius thamalakanensis, Enteromius thysi, Enteromius tiekoroi, Enteromius tomiensis, Enteromius tongaensis, Enteromius toppini, Enteromius traorei, Enteromius treurensis, Enteromius trimaculatus, Enteromius trinotatus, Enteromius trispiloides, Enteromius trispilomimus, Enteromius trispilopleura, Enteromius trispilos, Enteromius turkanae, Enteromius unitaeniatus, Enteromius urostigma, Enteromius usambarae, Enteromius vanderysti, Enteromius vandewallei, Enteromius venustus, Enteromius viktorianus, Enteromius viviparus, Enteromius walkeri, Enteromius wellmani, Enteromius yeiensis)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((-23.6874 16.958,-24.4615 17.1985,-24.6665 17.5286,-25.0075 17.6984,-25.6349 17.4955,-25.8608 17.0483,-25.642 16.5416,-24.4834 16.006,-23.7746 16.1142,-23.5201 16.4576,-23.6874 16.958))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008864-250827131500795/datasets/export for details.
DOI: 10.15468/dl.3jfcnz
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cordyline australis",
 "Country is Türkiye",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008865-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vmqxzd
title: Occurrence Download

description: A dataset containing 782 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cordyline australis",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 782 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008866-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ja87az
title: Occurrence Download

description: A dataset containing 18035 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Trillium undulatum"
 ]
}

 The dataset includes 18035 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008867-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pskdwz
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cordyline australis",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 73 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008868-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.abrexf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Enteromius macrops, Enteromius macrotaenia, Enteromius magdalenae, Enteromius marmoratus, Enteromius martorelli, Enteromius matthesi, Enteromius mattozi, Enteromius mediosquamatus, Enteromius melanotaenia, Enteromius mimus, Enteromius miolepis, Enteromius mocoensis, Enteromius multilineatus, Enteromius musumbi, Enteromius neefi, Enteromius neglectus, Enteromius neumayeri, Enteromius nigeriensis, Enteromius nigrifilis, Enteromius nigroluteus, Enteromius niokoloensis, Enteromius nounensis, Enteromius nyanzae, Enteromius okae, Enteromius oligogrammus, Enteromius olivaceus, Enteromius owenae, Enteromius pallidus, Enteromius paludinosus, Enteromius papilio, Enteromius parablabes, Enteromius parajae, Enteromius pellegrini, Enteromius perince, Enteromius petchkovskyi, Enteromius pleurogramma, Enteromius pobeguini, Enteromius poechii, Enteromius prionacanthus, Enteromius profundus, Enteromius pseudotoppini, Enteromius pumilus, Enteromius punctitaeniatus, Enteromius pygmaeus, Enteromius quadralineatus, Enteromius quadrilineatus, Enteromius quadripunctatus, Enteromius raimbaulti, Enteromius rapax, Enteromius roussellei, Enteromius rouxi, Enteromius rubrostigma, Enteromius salessei, Enteromius serengetiensis, Enteromius sexradiatus, Enteromius seymouri, Enteromius stanleyi, Enteromius stauchi, Enteromius stigmatopygus, Enteromius subinensis, Enteromius sublineatus, Enteromius sylvaticus, Enteromius syntrechalepis, Enteromius taeniopleura, Enteromius taeniurus, Enteromius tanapelagius, Enteromius tegulifer, Enteromius tetraspilus, Enteromius tetrastigma, Enteromius teugelsi, Enteromius thamalakanensis, Enteromius thysi, Enteromius tiekoroi, Enteromius tomiensis, Enteromius tongaensis, Enteromius toppini, Enteromius traorei, Enteromius treurensis, Enteromius trimaculatus, Enteromius trinotatus, Enteromius trispiloides, Enteromius trispilomimus, Enteromius trispilopleura, Enteromius trispilos, Enteromius turkanae, Enteromius unitaeniatus, Enteromius urostigma, Enteromius usambarae, Enteromius vanderysti, Enteromius vandewallei, Enteromius venustus, Enteromius viktorianus, Enteromius viviparus, Enteromius walkeri, Enteromius wellmani, Enteromius yeiensis)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((40.3629 -22.8988,40.7455 -22.7347,40.8996 -22.3696,40.751 -22.0066,40.3849 -21.8351,39.9523 -22.0203,39.831 -22.3517,39.978 -22.7301,40.3629 -22.8988))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008869-250827131500795/datasets/export for details.
DOI: 10.15468/dl.dmgh6x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Enteromius macrops, Enteromius macrotaenia, Enteromius magdalenae, Enteromius marmoratus, Enteromius martorelli, Enteromius matthesi, Enteromius mattozi, Enteromius mediosquamatus, Enteromius melanotaenia, Enteromius mimus, Enteromius miolepis, Enteromius mocoensis, Enteromius multilineatus, Enteromius musumbi, Enteromius neefi, Enteromius neglectus, Enteromius neumayeri, Enteromius nigeriensis, Enteromius nigrifilis, Enteromius nigroluteus, Enteromius niokoloensis, Enteromius nounensis, Enteromius nyanzae, Enteromius okae, Enteromius oligogrammus, Enteromius olivaceus, Enteromius owenae, Enteromius pallidus, Enteromius paludinosus, Enteromius papilio, Enteromius parablabes, Enteromius parajae, Enteromius pellegrini, Enteromius perince, Enteromius petchkovskyi, Enteromius pleurogramma, Enteromius pobeguini, Enteromius poechii, Enteromius prionacanthus, Enteromius profundus, Enteromius pseudotoppini, Enteromius pumilus, Enteromius punctitaeniatus, Enteromius pygmaeus, Enteromius quadralineatus, Enteromius quadrilineatus, Enteromius quadripunctatus, Enteromius raimbaulti, Enteromius rapax, Enteromius roussellei, Enteromius rouxi, Enteromius rubrostigma, Enteromius salessei, Enteromius serengetiensis, Enteromius sexradiatus, Enteromius seymouri, Enteromius stanleyi, Enteromius stauchi, Enteromius stigmatopygus, Enteromius subinensis, Enteromius sublineatus, Enteromius sylvaticus, Enteromius syntrechalepis, Enteromius taeniopleura, Enteromius taeniurus, Enteromius tanapelagius, Enteromius tegulifer, Enteromius tetraspilus, Enteromius tetrastigma, Enteromius teugelsi, Enteromius thamalakanensis, Enteromius thysi, Enteromius tiekoroi, Enteromius tomiensis, Enteromius tongaensis, Enteromius toppini, Enteromius traorei, Enteromius treurensis, Enteromius trimaculatus, Enteromius trinotatus, Enteromius trispiloides, Enteromius trispilomimus, Enteromius trispilopleura, Enteromius trispilos, Enteromius turkanae, Enteromius unitaeniatus, Enteromius urostigma, Enteromius usambarae, Enteromius vanderysti, Enteromius vandewallei, Enteromius venustus, Enteromius viktorianus, Enteromius viviparus, Enteromius walkeri, Enteromius wellmani, Enteromius yeiensis)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((-16.8996 20.2064,-16.9237 20.0599,-16.8618 20.0599,-16.8618 22.7792,-17.2424 22.4474,-17.4477 21.9344,-17.5933 20.7331,-17.3825 20.3945,-16.8996 20.2064))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008871-250827131500795/datasets/export for details.
DOI: 10.15468/dl.rtzebb
title: Occurrence Download

description: A dataset containing 7073 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dipteryx"
 ]
}

 The dataset includes 7073 records from 283 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008873-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3hkrmx
title: Occurrence Download

description: A dataset containing 33814 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Holodiscus discolor"
 ]
}

 The dataset includes 33814 records from 281 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008872-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uau7fm
title: Occurrence Download

description: A dataset containing 37800 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tabebuia"
 ]
}

 The dataset includes 37800 records from 698 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008874-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.23730859.v1
title: Additional file 6 of Mapping intron retention events contributing to complex traits using splice quantitative trait locus

description: Additional file 6: Table S5. Summary of primer sequences used in the study.
DOI: 10.6084/m9.figshare.23730862
title: Additional file 7 of Mapping intron retention events contributing to complex traits using splice quantitative trait locus

description: Additional file 7: Table S6. Summary for cis-sQTL coupled miRNA.
DOI: 10.6084/m9.figshare.23730935.v1
title: Additional file 1 of Downregulation of MAL2 inhibits breast cancer progression through regulating β-catenin/c-Myc axis

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.23730856
title: Additional file 5 of Mapping intron retention events contributing to complex traits using splice quantitative trait locus

description: Additional file 5: Table S4. Indentified cis-sQTL are affective to transcription factors.
DOI: 10.6084/m9.figshare.23730871.v1
title: Additional file 2 of Causal effects of serum lipid biomarkers on early age-related macular degeneration using Mendelian randomization

description: Additional file 2: Tables S2 to S6.
DOI: 10.6084/m9.figshare.13245392
title: Additional file 2 of A DNA methylation state transition model reveals the programmed epigenetic heterogeneity in human pre-implantation embryos

description: Additional file 2: Table S1. A total of 64 genes showed both high DNA methylation heterogeneity at promoters and expression heterogeneity in human 8-cell stage embryos.
DOI: 10.6084/m9.figshare.13245580
title: Additional file 3 of Natural variation of physiological traits, molecular markers, and chlorophyll catabolic genes associated with heat tolerance in perennial ryegrass accessions

description: Additional file 3: Supplementary materials 2. Major allele frequency, polymorphic bands, polymorphism information content, and gene diversity index of 66 pairs of SSR used for genetic diversity analysis in 98 ryegrass accessions.
DOI: 10.5281/zenodo.10649394
title: Pharmaceutico-analytical Study of Dhananjayadi Vati and Assessment for its Antihistaminic Activity- Study Protocol Checklist

description: Pharmaceutico-analytical Study of Dhananjayadi Vati and Assessment for its Antihistaminic Activity- Study Protocol Checklist
DOI: 10.5281/zenodo.10649395
title: Pharmaceutico-analytical Study of Dhananjayadi Vati and Assessment for its Antihistaminic Activity- Study Protocol Checklist

description: Pharmaceutico-analytical Study of Dhananjayadi Vati and Assessment for its Antihistaminic Activity- Study Protocol Checklist
DOI: 10.6084/m9.figshare.22684261.v1
title: A meta-analysis of epigenome-wide association studies on pregnancy vitamin B12 concentrations and offspring DNA methylation

description: Circulating vitamin B12 concentrations during pregnancy are associated with offspring health. Foetal DNA methylation changes could underlie these associations. Within the Pregnancy And Childhood Epigenetics Consortium, we meta-analysed epigenome-wide associations of circulating vitamin B12 concentrations in mothers during pregnancy (<i>n</i> = 2,420) or cord blood (<i>n</i> = 1,029), with cord blood DNA methylation. Maternal and newborn vitamin B12 concentrations were associated with DNA methylation at 109 and 7 CpGs, respectively (False Discovery Rate <i>P</i>-value &lt;0.05). Persistent associations with DNA methylation in the peripheral blood of up to 482 children aged 4–10 y were observed for 40.7% of CpGs associated with maternal vitamin B12 and 57.1% of CpGs associated with newborn vitamin B12. Of the CpGs identified in the maternal meta-analyses, 4.6% were associated with either birth weight or gestational age in a previous work. For the newborn meta-analysis, this was the case for 14.3% of the identified CpGs. Also, of the CpGs identified in the newborn meta-analysis, 14.3% and 28.6%, respectively, were associated with childhood cognitive skills and nonverbal IQ. Of the 109 CpGs associated with maternal vitamin B12, 18.3% were associated with nearby gene expression. In this study, we showed that maternal and newborn vitamin B12 concentrations are associated with DNA methylation at multiple CpGs in offspring blood (<i>P</i><sub>FDR</sub>&lt;0.05). Whether this differential DNA methylation underlies associations of vitamin B12 concentrations with child health outcomes, such as birth weight, gestational age, and childhood cognition, should be further examined in future studies.
DOI: 10.6084/m9.figshare.13245577
title: Additional file 2 of Natural variation of physiological traits, molecular markers, and chlorophyll catabolic genes associated with heat tolerance in perennial ryegrass accessions

description: Additional file 2: Supplementary materials 1. Values of all physiological traits before and after heat tolerance in 98 ryegrass accessions.
DOI: 10.6084/m9.figshare.13245578.v1
title: Additional file 2 of Transcriptional response of Bacillus megaterium FDU301 to PEG200-mediated arid stress

description: Additional file 2: Table S1. Significant DEGs.
DOI: 10.6084/m9.figshare.13245587
title: Additional file 5 of Transcriptional response of Bacillus megaterium FDU301 to PEG200-mediated arid stress

description: Additional file 5: Table S4. Respiration-related genes.
DOI: 10.6084/m9.figshare.13245577.v1
title: Additional file 2 of Natural variation of physiological traits, molecular markers, and chlorophyll catabolic genes associated with heat tolerance in perennial ryegrass accessions

description: Additional file 2: Supplementary materials 1. Values of all physiological traits before and after heat tolerance in 98 ryegrass accessions.
DOI: 10.6084/m9.figshare.13245583
title: Additional file 4 of Natural variation of physiological traits, molecular markers, and chlorophyll catabolic genes associated with heat tolerance in perennial ryegrass accessions

description: Additional file 4: Supplementary materials 3. Linkage group, physical distance, and primer sequences of 66 SSRs used in this study.
DOI: 10.6084/m9.figshare.13245584.v1
title: Additional file 4 of Transcriptional response of Bacillus megaterium FDU301 to PEG200-mediated arid stress

description: Additional file 4: Table S3. ABC transporters-related genes.
DOI: 10.6084/m9.figshare.13245581.v1
title: Additional file 3 of Transcriptional response of Bacillus megaterium FDU301 to PEG200-mediated arid stress

description: Additional file 3: Table S2. COG annotation.
DOI: 10.5281/zenodo.10605184
title: OneNet project - KPIs repository

description: This data set is the result of the work carried out in the OneNet project related to the evaluation of demonstrators' results.    The data set consists of the KPI values that were achieved in all OneNet demonstrators, as well as their characterization and a brief description of the objectives for calculating each KPI. In the complementary document, the calculation methodologies and formulas of each KPI are reported.
description: Relevant documentation: OneNet D11.1 Evaluation of OneNet demonstrators - https://www.onenet-project.eu//wp-content/uploads/2023/10/OneNet_D11.1_V1.0.pdf
DOI: 10.5281/zenodo.10649408
title: CONSIDERATIONS ON THE SYNTAX OF THE ARABIC LANGUAGE (BASED ON THE WORK OF MIFTAHU-L-ULUM)
DOI: 10.5281/zenodo.10649409
title: CONSIDERATIONS ON THE SYNTAX OF THE ARABIC LANGUAGE (BASED ON THE WORK OF MIFTAHU-L-ULUM)
DOI: 10.5281/zenodo.10649423
title: DAVLAT XARIDI
DOI: 10.5281/zenodo.10649424
title: DAVLAT XARIDI
DOI: 10.6084/m9.figshare.12197133
title: Additional file 2 of A cost-sensitive online learning method for peptide identification

description: Additional file 2 Cross validation results. Details of the Cross validation results (Excel file).
DOI: 10.6084/m9.figshare.13245581
title: Additional file 3 of Transcriptional response of Bacillus megaterium FDU301 to PEG200-mediated arid stress

description: Additional file 3: Table S2. COG annotation.
DOI: 10.6084/m9.figshare.13246937.v1
title: Pre-exposure to <i>Candida glabrata</i> protects <i>Galleria mellonella</i> against subsequent lethal fungal infections

description: Commensal fungi are an important part of human microbial community, among which <i>Candida albicans</i> and <i>Candida glabrata</i> are two common opportunistic pathogens. Unlike the high pathogenicity of <i>C. albicans, C. glabrata</i> is reported to show low pathogenicity to the host. Here, by using a <i>Galleria mellonella</i> infection model, we were able to confirm the much lower virulence of <i>C. glabrata</i> than <i>C. albicans</i>. Interestingly, pre-exposure to live <i>C. glabrata</i> (LCG) protects the larvae against subsequent various lethal fungal infections, including <i>C. albicans, Candida tropicalis,</i> and <i>Cryptococcus neoformans</i>. Inconsistently, heat-inactivated <i>C. glabrata</i> (HICG) pre-exposure can only protect against <i>C. albicans</i> or <i>C. tropicalis</i> re-infection, but not <i>C. neoformans</i>. Mechanistically, LCG or HICG pre-exposure enhanced the fungicidal activity of hemocytes against <i>C. albicans</i> or <i>C. tropicalis</i>. Meanwhile, LCG pre-exposure enhanced the humoral immunity by modulating the expression of fungal defending proteins in the cell-free hemolymph, which may contribute to the protection against <i>C. neoformans</i>. Together, this study suggests the important role of <i>C. glabrata</i> in enhancing host immunity, and demonstrates the great potential of <i>G. mellonella</i> model in studying the innate immune responses against infections.
DOI: 10.6084/m9.figshare.11673999.v3
title: Optimal Permutation Recovery in Permuted Monotone Matrix Model

description: <b>Motivated by recent research on quantifying bacterial growth dynamics based on genome assemblies, we consider a permuted monotone matrix model</b>Y=ΘΠ+Z<b>, where the rows represent different samples, the columns represent contigs in genome assemblies and the elements represent log-read counts after preprocessing steps and Guanine-Cytosine (GC) adjustment. In this model, Θ is an unknown mean matrix with monotone entries for each row, Π is a permutation matrix that permutes the columns of Θ, and <i>Z</i> is a noise matrix. This article studies the problem of estimation/recovery of Π given the observed noisy matrix <i>Y</i>. We propose an estimator based on the best linear projection, which is shown to be minimax rate-optimal for both exact recovery, as measured by the 0-1 loss, and partial recovery, as quantified by the normalized Kendall’s tau distance. Simulation studies demonstrate the superior empirical performance of the proposed estimator over alternative methods. We demonstrate the methods using a synthetic metagenomics dataset of 45 closely related bacterial species and a real metagenomic dataset to compare the bacterial growth dynamics between the responders and the nonresponders of the IBD patients after 8 weeks of treatment. Supplementary materials for this article are available online.</b>
DOI: 10.6084/m9.figshare.13245587.v1
title: Additional file 5 of Transcriptional response of Bacillus megaterium FDU301 to PEG200-mediated arid stress

description: Additional file 5: Table S4. Respiration-related genes.