cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/hd91q-3j182
title: MP PrkC 27.5KX

description: Mycoplasma pneumonia PrkC mutant, ok, hardly see feature
description: <strong>Tilt Series Date:</strong> 2010-01-02</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-02-34/rawdata/</p>10jan02b_B116a_038.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-02-34/rawdata/10jan02b_B116a_038.mrc"
        > <i class="download icon"></i> Download </a></p>

        10jan02b_B116a_038_full.rec,  Reconstruction (Pixel Size 1.548 nm), 419.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-02-34/3dimage_16939/10jan02b_B116a_038_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/b0kd3-97604
title: Protochlamydia amoebophila

description: Intact cells purified from amoeba cultures
description: <strong>Tilt Series Date:</strong> 2011-08-04</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Protochlamydia amoebophila</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Matthias Horn</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Purified</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-08-04-61/rawdata/</p>2011_08_04_C9_0013.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-08-04-61/rawdata/2011_08_04_C9_0013.mrc"
        > <i class="download icon"></i> Download </a></p>

        2011_08_04_C9_0013_full.rec,  Reconstruction (Pixel Size 1.89 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-08-04-61/3dimage_31732/2011_08_04_C9_0013_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/3mh8k-j0q96
title: E.coli "strain11" A413T CheAoff

description: E.coli methylation site mutant locked in a CHeA inactivating state
description: <strong>Tilt Series Date:</strong> 2011-03-04</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: °, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> mutant from John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> cells grown at 30C in TB to log phase, then treated with penicillin for one hour </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-03-04-3/rawdata/</p>11mar04a_coli11_013.st,  Tilt Series (Pixel Size 0.0 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-03-04-3/rawdata/11mar04a_coli11_013.st"
        > <i class="download icon"></i> Download </a></p>

        11mar04a_coli11_013.rec,  Reconstruction (Pixel Size 0.0 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-03-04-3/3dimage_15498/11mar04a_coli11_013.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zft0b-3kq44
title: Agrobacterium tumefaciens

description: Agrobacterium_VirB8-GFP_deltaVirB8
description: <strong>Tilt Series Date:</strong> 2013-06-02</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from Pat Zambryski</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-02-34/rawdata/</p>agro_virB8_delta0016.mrc,  Tilt Series (Pixel Size 0.48 nm), 2.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-02-34/rawdata/agro_virB8_delta0016.mrc"
        > <i class="download icon"></i> Download </a></p>

        16_full.rec,  Reconstruction (Pixel Size 1.92 nm), 660.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-02-34/3dimage_56699/16_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/gnq8r-z9353
title: E.coli "strain11" A413T CheAoff

description: E.coli methylation site mutant locked in a CheA inactivating state
description: <strong>Tilt Series Date:</strong> 2011-08-18</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: °, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> mutant from John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> cells grown at 30C in TB to log phase, then treated with penicillin for one hour </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-08-18-38/rawdata/</p>Ecolistrain11_2_081811_0015.st,  Tilt Series (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-08-18-38/rawdata/Ecolistrain11_2_081811_0015.st"
        > <i class="download icon"></i> Download </a></p>

        Ecolistrain11_2_081811_0015.rec,  Reconstruction (Pixel Size 0.0 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-08-18-38/3dimage_15578/Ecolistrain11_2_081811_0015.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ntmf2-3jw48
title: R. sphaeroides Cryosections

description: R. sphaeroides Cryosections strain 593
description: <strong>Tilt Series Date:</strong> 2013-10-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 44000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Judith Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-95/rawdata/</p>rhodosectionsatlas20043.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-95/rawdata/rhodosectionsatlas20043.mrc"
        > <i class="download icon"></i> Download </a></p>

        rhodosectionsatlas20043_full.rec,  Reconstruction (Pixel Size 0.64 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-95/3dimage_33224/rhodosectionsatlas20043_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.n4wzz7
title: Occurrence Download

description: A dataset containing 5204 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Anseriformes",
 "Year 2024-2025"
 ]
}

 The dataset includes 5204 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044798-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/h401p-csh45
title: magnetosome induced t1

description: Raw data files of magnetosome induced t1
description: <strong>Tilt Series Date:</strong> 2014-06-19</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum </p>
<strong>Strain:</strong> deltaQ 167</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  psa2014-06-19-19_slicer9560.jpg: Filament parallel to membrane .  Magnetosporillum magneticum psa2014-06-19-19_slicer9562.jpg: Magnetosporillum magneticum .  flagellum psa2014-06-19-19_slicer9566.jpg: magnetosporillum magneticum .  flat vesicles
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-06-19-19/rawdata/</p>atlas40015.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-06-19-19/rawdata/atlas40015.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas40015_full.rec,  Reconstruction (Pixel Size 2.4 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-06-19-19/3dimage_43779/atlas40015_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/yn1hk-s3m90
title: dQ167_10h_induced

description: This is the strain in which dQ has been deactivated and an inducible plasmid is present for dQ
description: <strong>Tilt Series Date:</strong> 2014-12-30</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum </p>
<strong>Strain:</strong> deltaQ 167</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Arash Komeili</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-30-46/rawdata/</p>dQ167_10hinduced_atlas11_montage20008.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-30-46/rawdata/dQ167_10hinduced_atlas11_montage20008.mrc"
        > <i class="download icon"></i> Download </a></p>

        dQ167_10hinduced_atlas11_montage20008_full.rec,  Reconstruction (Pixel Size 2.4 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-30-46/3dimage_50075/dQ167_10hinduced_atlas11_montage20008_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/nepg1-dsx45
title: Caulobacter SS347

description: Caulobacter crescentus strain SS347.deletion mutant causing a chaining phenotype
description: <strong>Tilt Series Date:</strong> 2014-12-10</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Martin Thanbichler</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown overnight in PYE</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-12-10-44/rawdata/</p>SS347manual5.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-12-10-44/rawdata/SS347manual5.mrc"
        > <i class="download icon"></i> Download </a></p>

        SS347manual5.rec,  Reconstruction (Pixel Size 1.28 nm), 1.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-12-10-44/3dimage_48767/SS347manual5.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/jm44f-n9d19
title: Protochlamydia amoebophila

description: Intact cells purified from amoeba cultures
description: <strong>Tilt Series Date:</strong> 2011-08-04</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Protochlamydia amoebophila</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Matthias Horn</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Purified</p>
  mpa2011-08-04-2_slicer9800.jpg: Protochlamydia amoebophila .  extracellular vesicle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-08-04-2/rawdata/</p>2011_08_04_C9_0006.st,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-08-04-2/rawdata/2011_08_04_C9_0006.st"
        > <i class="download icon"></i> Download </a></p>

        2011_08_04_C9_0006.rec,  Reconstruction (Pixel Size 1.89 nm), 2.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-08-04-2/3dimage_31572/2011_08_04_C9_0006.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/aebc9-m6q52
title: Caulobacter 477-CpdRD51A

description: Caulobacter strain carrying a xylose inducible medium copy plasmid that expresses a constitutively active version of CpdR.
description: <strong>Tilt Series Date:</strong> 2013-01-14</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 230.0 eV/Å²,  defocus: -12.0 μm,  magnification: 19500x. </p>
<strong>Acquisition Software:</strong> FEIbatchtomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Peter Chienpchien@biochem.umass.edu</p>
<strong>Purification / Growth Conditions / Treatment:</strong> strain grown with 25 µl/ml spectinomycin and induced with 0.1% Xylose for 8 hours</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-01-14-27/rawdata/</p>477_08.mrc,  Tilt Series (Pixel Size 0.5797 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-01-14-27/rawdata/477_08.mrc"
        > <i class="download icon"></i> Download </a></p>

        477_08_part131_18.rec,  Reconstruction (Pixel Size 1.1594 nm), 838.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-01-14-27/3dimage_24582/477_08_part131_18.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/sd3q9-mmx08
title: L256T chemotaxis mutant

description: L256T HAMP mutant locked in an 'CheA activating state'
description: <strong>Tilt Series Date:</strong> 2010-03-18</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> John Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB media with Chloramphenicol, induced with 0.6µM salicylate for 3 hours, penicillin treated for 1 hour</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-03-18-19/rawdata/</p>10mar29a_EcoliL256T_003.st,  Tilt Series (Pixel Size 0.632 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-03-18-19/rawdata/10mar29a_EcoliL256T_003.st"
        > <i class="download icon"></i> Download </a></p>

        10mar29a_EcoliL256T_003.rec,  Reconstruction (Pixel Size 0.632 nm), 286.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-03-18-19/3dimage_12728/10mar29a_EcoliL256T_003.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/y18ew-51f85
title: E. coli (pLE6, 20 um IPTG)

description: e. coli from Larry Rothfield containing plasmid carrying WT MreB.
description: <strong>Tilt Series Date:</strong> 2011-07-29</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Sample Preparation:</strong> Induced with 20um IPTG for 2 hours starting at OD600=0.2.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2011-07-29-13/3dimage_44268/</p>20110729_ple6_20umIPTG0005_part122_4.rec,  Reconstruction (Pixel Size 1.892 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2011-07-29-13/3dimage_44268/20110729_ple6_20umIPTG0005_part122_4.rec"
        > <i class="download icon"></i> Download </a></p>

        20110729_ple6_20umIPTG0005.mrc,  Tilt Series (Pixel Size 0.946 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2011-07-29-13/rawdata/20110729_ple6_20umIPTG0005.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.7wnvkz
title: Occurrence Download

description: A dataset containing 317 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Homolepis aturensis"
 ]
}

 The dataset includes 317 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044799-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/s8qng-s7b74
title: Agro C58

description: Wild type Agrobacterium was induced at 19C for 24h in liquid for Tpili
description: <strong>Tilt Series Date:</strong> 2013-06-06</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-06-06-20/rawdata/</p>agro_c580020.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.7 GB  
        
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        agro_c580020_part133_9.rec,  Reconstruction (Pixel Size 1.68 nm), 430.6 MB  
        
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