cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/j35bbxy8m4
title: LINF_160012900

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/j3gjt5d8fy
title: Data for: In situ Raman Spectroscopic Study of Nitrogen Speciation in Aqueous Fluids under Pressure

description: Processed data
DOI: 10.17632/prhg86wd8t
title: Identifying BWH stage T2a cutaneous squamous cell carcinoma at risk for poor outcomes Supplemental material

description: Supplemental Material for manuscript Identifying BWH stage T2a Cutaneous squamous cell carcinoma at risk for poor outcomes
DOI: 10.17632/r8wr8wkvxb
title: Major element, trace element, and H2O abundances in clinopyroxene phenocrysts and equilibrium melts from the Austral Islands

description: Clinopyroxene phenocrysts crystallized at depth from ocean island basalts record information on magma H2O contents and may be less prone to degassing processes than quenched glasses or melt inclusions formed at lower pressures. Here we report major and trace element and H2O abundances in clinopyroxene phenocrysts from Austral Island basalts, as well as calculated melt compositions in equilibrium with the phenocrysts. These data provide constraints on pre-eruptive magmatic water contents in basaltic magmas from an ocean island setting. This dataset also provides information on the calibration curves used in SIMS analysis of the phenocryst water contents, and estimated cpx/melt partition coefficients used to calculate melt compositions.
DOI: 10.17632/p6vg2tpg84
title: Data for: Holocene temperature, effective precipitation and seasonality in northern New Zealand linked to Southern Hemisphere summer insolation
DOI: 10.6084/m9.figshare.14345342.v1
title: Supplementary Material for: Effect of Peer Mentoring on Quality of Life among CKD Patients: Randomized Controlled Trial

description: <b><i>Introduction:</i></b> CKD is associated with decreased quality of life (QOL). Peer mentoring (PM) leads to improved QOL in various chronic diseases. The effectiveness of PM on QOL of patients with CKD has not been previously studied. We conducted a randomized clinical trial to test the effectiveness of face-to-face (FTF) and online mentoring by trained peers, compared with usual care, on CKD patients’ QOL. <b><i>Methods:</i></b> We randomized 155 patients in one of 3 groups: (1) FTF PM (<i>n</i> = 52), (2) online PM (<i>n</i> = 52), and (3) textbook only (<i>n</i> = 51). Peer mentors were patients with CKD, who received formal training through 16 h of instruction. Participants in all 3 groups received a copy of an informational textbook about CKD. Participants assigned to PM received either 6 months of FTF or online PM. The outcomes included time-related changes in domain scores of the Kidney Disease Quality of Life (KDQOL)-36 for each of the groups over the 18-month study period. <b><i>Results:</i></b> Compared with baseline, online PM led to improved scores in domains of the KDQOL-36 at 18 months: Effects of Kidney Disease (<i>p</i> = 0.01), Burden of Kidney Disease (<i>p</i> = 0.01), Symptoms and Problems of Kidney Disease (<i>p</i> = 0.006), SF-12 Physical Composite Summary (<i>p</i> = 0.001), and SF-12 Mental Composite Summary (<i>p</i> &lt; 0.001). There were no statistically significant changes from baseline in domain scores of KDQOL-36 within the FTF PM and textbook-only groups. <b><i>Conclusions:</i></b> Among patients with CKD, online PM led to increased scores in domains of the KDQOL-36 at 18 months. The study was limited to English-speaking subjects with computer literacy and internet access.
DOI: 10.6084/m9.figshare.18320363.v2
title: Literature-based dataset of show caves.xlsx

description: Literature-based dataset including the list of show caves and their related information based on papers retrieved with a systematic bibliographic research. It is related to the manuscript entitled "Promoting sustainable use of geoheritage: a literature-based dataset of the ecological status of world show caves" submitted to Nature Conservation journal.
DOI: 10.17632/zjpm35vmbp
title: Visual Recognition System for Gas Meter Calibration

description: Files to build a computer vision based on raspberry pi for automatic detection of odometer on mechanical gas meters. 

This repository contains dataset for training an OCR based on TESSERACT for the digit recognition, phyton scrip based on Open CV and aditional files and more documentes to build a device capable of recognition of odometer for counting volume flow with a resolution in liters.
DOI: 10.6084/m9.figshare.13525649.v1
title: 16PF dataset

description: The Cattell 16PF dataset used for this study.
DOI: 10.6084/m9.figshare.25201520.v1
title: LBP full dataset

description: Data set Full for LBP Trial
DOI: 10.17632/d8c68ttykr
title: Data for: Precision and Trueness of Implant Placement with and without Static Surgical Guides: An In Vitro Study

description: This dataset contains all values for each n=20 single implant placement using static surgical guided (fully guided: H2, H4, H6; partially guided: PG) or without using a guide (free hand: FH).
DOI: 10.17632/ft2s37g7hf
title: Comparative proteomic analysis of casein micelles in human colostrum, human mature milk, and small ruminant milk using data-independent acquisition for precision improvement of infant formula

description: Table S1. Proteins identified in the casein micelles of colostrum and mature milk from human, goat and sheep.
Table S2. Differential abundant casein micelles proteins of colostrum and mature milk from human, goat and sheep.
Table S3. KEGG pathways of the differentially expressed proteins in milk casein micelles.
Supplementary Fig. 1. Cluster analysis of casein micelle proteome in colostrum and mature milk from human, goat and sheep.
Supplementary Fig. 2. Protein-protein interaction (PPI) of differential casein micelle proteins between human and small ruminant colostrum and between human and small ruminant mature milk.
Supplementary Fig. 3. Protein-protein interaction (PPI) networks of differential proteins between human and small ruminant colostrum and mature milk. HC: human colostrum, HM: human mature milk, GC: goat colostrum, GM: goat mature milk, SC: sheep colostrum, SM: sheep mature milk.
DOI: 10.17632/c9ckcvjxc7
title: Supraspinal circuits contribute to the failure of antagonistic inhibition and freezing of gait in Parkinson’s disease

description: All relevant information needed to access the data can be found under GitHub: https://github.com/PKlocke/SenseFOG-Documentation.
DOI: 10.15468/dl.d9vuhc
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.32_1",
 "TaxonKey is Euphydryas anicia (E.Doubleday, 1847)"
 ]
}

 The dataset includes 48 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009159-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/nv8swjd277
title: Sholl analysis of mitochondria from article The adaptor protein Miro1 modulates horizontal transfer of mitochondria in cancer

description: The following script was used to quantify mitochondrial distribution (Sholl analysis macro) using FIJI (ImageJ) software in the context of the knockout of the Miro1 mitochondrial adaptor protein as described previously in López‐Doménech et al. with minor modifications [1]. A brief description of the script's function follows (the script, demonstration data, and expected output files are attached). On the input files (z-stack confocal images of a single cell containing three channels corresponding to the nucleus, actin network, and mitochondria), the nucleus is segmented and delineated to retrieve the first shell. Subsequently, the area of the segmented actin network or segmented mitochondria is quantified in 30 concentric shells, each increased by one micrometre in radius. Output data are saved as a .csv file plus an overview image to double-check successful segmentation.

[1] López-Doménech G, Covill-Cooke C, Ivankovic D, Halff EF, Sheehan DF, Norkett R, Birsa N, Kittler JT. Miro proteins coordinate microtubule- and actin-dependent mitochondrial transport and distribution. EMBO J. 2018 Feb 1;37(3):321-336. doi: 10.15252/embj.201696380. Epub 2018 Jan 8. PMID: 29311115; PMCID: PMC5793800.
DOI: 10.4121/21170665.v1
title: Screenshots of Virtual Reality Imagery Rescripting tool

description: This set contains several screenshots of Virtual Reality scenes used as part of Imagery Rescripting therapy for PTSD patients. The screenshots show the editor environment in which the therapist created a 3D world before the therapy session. Next, the set contains screenshots of 5 scenes of the 3D world as seen from the patient's perspective.
DOI: 10.6084/m9.figshare.20366145.v2
title: Sleep patterns and incident cardiovascular disease in patients with prediabetes and diabetes: a prospective cohort study

description: This study aimed to investigate the association between sleep patterns and risk of incident CVD among patients with prediabetes or diabetes
DOI: 10.6084/m9.figshare.25249369.v1
title: Data.xlsx

description: The data employed in this study were sourced from the 2021 Chinese General Social Survey (CGSS).
DOI: 10.6084/m9.figshare.27752274.v1
title: Supplementary Material for: Impact of early oral feeding on postoperative outcomes after elective colorectal surgery: a systematic review and meta-analysis

description: Introduction: This study aimed to evaluate the influence of early oral feeding (EOF), a key component of enhanced recovery after surgery protocols, on postoperative outcomes in patients undergoing elective colorectal surgery.
Methods: We searched the Medline, Embase, Cochrane Library, and KoreaMed databases to include randomized clinical trials comparing EOF that started on postoperative day 1 and conventional oral feeding that commenced after first flatus. Two authors independently screened the retrieved records and extracted data. The primary outcome was total complications. Data were pooled, and the overall effect size was calculated. 
Results: We screened 13 studies, and 1,556 patients were included in the analysis. The EOF group exhibited fewer total complications (odds ratio [OR] 0.50; 95% confidence interval [CI] 0.38 to 0.65). Anastomotic leakage was also reduced in the EOF group (OR 0.40; 95% CI 0.19 to 0.83); however, an increased incidence of vomiting (OR 1.58; 95% CI 1.11 to 2.26) as well as a tendency of higher rate of nasogastric tube reinsertion (OR 1.49; 95% CI 0.96 to 2.31) were observed. The EOF group demonstrated a decreased time to flatus (mean difference [MD] -0.87; 95% CI -1.00 to -0.74) and shortened hospital stay (MD -0.76; 95% CI -0.89 to -0.6). No significant difference in mortality was observed between the two groups (OR 0.54; 95% CI 0.15 to 2.01).
Conclusion: EOF proved to be a safe and effective practice for patients undergoing elective colorectal surgery. However, the increased incidence of vomiting necessitates careful consideration.
DOI: 10.17632/ckmh2h7sc5
title: SfePy: Numerical simulation of flow in deformable porous media

description: Code for finite element simulation of flow in deformable porous media.
DOI: 10.17632/w26g5fkdx8
title: Vollger MR, Logsdon GA, et al. Ann Hum Genet. 2019

description: Vollger MR, Logsdon GA, Audano PA, et al. Improved assembly and variant detection of a haploid human genome using single-molecule, high-fidelity long reads. Ann Hum Genet. 2019; 1–16. https://doi.org/10.1111/ahg.12364
DOI: 10.6084/m9.figshare.13234310.v2
title: Gimeno_NewPhyt_2021_WTC3_gmes.rar

description: There are five files included in this package:<br>1) readMe.txt2) WTC_TEMP_gmes_subdaily_20131018-20140420_L2.csv3) WTC_TEMP_gmes_20131018-20140420_L2.csv4) Gimeno_etal_WTC_gmes_NP_FINAL_w_Fig.pdf5) Gimeno_etal_2019_WTC_gmes_NP_SUPP_FINAL.pdf<br>These files contain the data included in this publication:<br><br>Title:Whole-tree mesophyll conductance reconciles isotopic and gas-exchange estimates of water-use efficiency<br>Authors list:Teresa E. Gimeno, Courtney E. Campany, John E. Drake, Craig V. M. Barton, Mark G. Tjoelker, Nerea Ubierna and John D. Marshall<br>Accepted for publication in New Phytologist on the 7th November 2020<br>Corresponding author: Teresa E. Gimeno (teresa.gimeno@bc3research.org, tegimeno@gmail.com)<br>A pdf of the final accepted version of this mansucript, with its figures and a pdf with supplementary material are provided.<br>See readMe file for further details.
DOI: 10.6084/m9.figshare.25524172.v1
title: Raw data_Sex Disparities and Birth Date Impacts on Career Trajectory in Tennis

description: Raw dataset for origin article named Sex Disparities and Birth Date Impacts on Career Trajectory in Tennis
DOI: 10.6084/m9.figshare.3531755.v1
title: Appendix A. List of records used in the meta-analysis, followed by full citations.

description: List of records used in the meta-analysis, followed by full citations.
DOI: 10.17632/6zbg352m25
title: n3-Polyunsaturated fatty acids drive differentiation of H3K27M glial progenitors and restrict glioma growth

description: Lipidomic data from cells and media
DOI: 10.17632/6zz3h293nf
title: TweezPal – Optical tweezers analysis and calibration software

description: Abstract Optical tweezers, a powerful tool for optical trapping, micromanipulation and force transduction, have in recent years become a standard technique commonly used in many research laboratories and university courses. Knowledge about the optical force acting on a trapped object can be gained only after a calibration procedure which has to be performed (by an expert) for each type of trapped objects. In this paper we present TweezPal, a user-friendly, standalone Windows software tool for optical ... Title of program: TweezPal Catalogue Id: AEGR_v1_0 Nature of problem Quick, robust and user-friendly calibration and analysis of optical tweezers. The optical trap is calibrated from the trajectory of a trapped particle undergoing Brownian motion in a stationary optical trap (input data) using two methods. Versions of this program held in the CPC repository in Mendeley Data AEGR_v1_0; TweezPal; 10.1016/j.cpc.2010.07.024 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/xbxrc6d3xw
title: A co-segmentation dataset characterized by simple background(MLMR-COS)

description: The new proposed dataset for evaluating co-segmentation algorithms, which contains 66 image groups with 18 images in each and the pixel-wise hand-annotated ground truth. The dataset is characterized by simple background produced from a single color. It looks simple but actually very challenging for current co-segmentation algorithms, because of four diﬃcult cases in it: easy confused foreground with background, transparent regions in objects, minor holes in objects, and shadows.
DOI: 10.17632/kwbym72nck
title: Standardized Hudup dataset based on Movielens 100k

description: Standardized Hudup dataset receives information from raw data, which is composed of ten units such as “hdp_config”, “hdp_account”, “hdp_attribute_map”, “hdp_nominal”, “hdp_user”, “hdp_item”, “hdp_rating”, “hdp_context_template”, “hdp_context”, and “hdp_sample”. Each unit has particular functions, which is described in the section of data description. Hudup dataset is meta-data which models any raw data with abstract level. The default raw data which is source of Hudup dataset here is Movielens dataset (GroupLens, 1998) 100K has 100,000 ratings from 943 users on 1682 movies (items), which is available at https://files.grouplens.org/datasets/movielens/ml-100k.zip.
DOI: 10.17632/wm6tkmz73f
title: Supplemental data for: Combined effect of impaired glucose metabolism and Body Fatness on Brain MRI imaging markers in healthy elderly

description: Supplementary Materials for Combined effect of impaired glucose metabolism and Body Fatness on Brain MRI imaging markers in healthy elderly: The Environmental-Pollution-Induced Neurological EFfects (EPINEF) Study Supplemental methods 1: The Environmental-Pollution-Induced Neurological EFfects (EPINEF) Study Supplemental methods 2: Seoul Verbal Learning Test (SVLT) Supplemental methods 3: Partial least square structural equation model Supplemental table 1: Outer model evaluation indicators Supplemental table 2: Combined Effects of Body fatness and Impaired glucose metabolism on Brain structure according to path coefficient by PLS-SEM Supplemental table 3: Effects Body fatness on Brain structure via IGM according to path coefficient and indirect effects - Stratification by Body Fatness factor score Supplemental table 4: Effects Fatness on SNSB score (memory, language, and attention function) mediated by impaired glucose metabolism and brain structure (frontal lobe, temporal lobe, and hippocampus) according to path coefficient by PLS-SEM Supplemental figure 1: Flow chart of study participants Supplemental figure 2: Structural model of Partial Least Squares Structural Equation Modelling (PLS-SEM) for double mediation analysis estimating indirect effects fatness on SNSB score mediated impaired glucose metabolism and/or brain structure
DOI: 10.17632/s85bx36ff6
title: Data associated with "Dynamic changes to the plant cuticle include the production of volatile cuticular wax–derived compounds" 2023

description: GC-MS and NMR data associated with the manuscript: "Dynamic changes to the plant cuticle include the production of volatile cuticular wax–derived compounds" (2023).
DOI: 10.17632/5fdn3s9k8p
title: Strontium Isoscape (87Sr/86Sr) in Surface Water from the Amazon Basin

description: Spatial patterns of strontium isotope ratios (87Sr/86Sr) provide valuable information on geological and biogeochemical processes in aquatic systems. We present the first detailed isoscape of strontium isotope ratios in surface waters of the Amazon Basin.
This dataset was generated by interpolating data published in the literature and new samples collected in the region. The resulting isoscape can be used to:
-Infer the provenance of aquatic organisms: By analyzing the isotopic composition of calcified structures of fish and other organisms, it is possible to trace their areas of origin and migration within the watershed.
Understanding hydrogeological processes: The spatial variation of the 87Sr/86Sr ratio in surface water reflects the geological heterogeneity of the basin and can be used to investigate processes such as the mixing of groundwater and surface water, erosion and sediment transport.
-Assessing the influence of human activities: Strontium isoscape can serve as a tool for assessing the impact of activities such as mining and the construction of hydroelectric dams on the isotopic composition of waters and, consequently, on aquatic ecosystems.
The data available includes:
-87Sr/86Sr ratio values: Strontium isotope ratio values are displayed for each pixel.
-Digital isoscape model: Spatial representation of the variation in the 87Sr/86Sr ratio in the river basin.
DOI: 10.17632/kvcdxnv6n3
title: PTSD and Test Anxiety

description: Data is concerning test anxiety and post traumatic stress symptoms in a sample of nontraditional college students. The two variables are correlated across the sample, but the correlation was not evident among students who have previously deployed to a combat zone. Both test anxiety and post traumatic stress symptoms were associated with lower grade point averages. There was also an indirect relationship between post traumatic stress symptoms and test anxiety on grade point average.
DOI: 10.17632/dg5wjj7xdf
title: Compositional and morphological variations of effusive lava flows and explosive pyroclastic deposits at the caldera forming Gardner shield volcano on the Moon

description: Here are all the maps utilized for the research publication 'Compositional and morphological variations of effusive lava flows and explosive pyroclastic deposits at the caldera forming Gardner shield volcano on the Moon', published in JGR-Planet journal, that includes .dat files and .hdr files of LRO Diviner data and Chandrayaan-1 M3 IBD FCC maps, of the Gardner shield volcano. The data includes M3 spectra utilized in this work as .mat files.

The uploaded files list:
1) Gardner M3 IBD FCC Map (.dat, .hdr) files.
2) M3 Glass band depth parameter map (.dat, .hdr) files.
3) Diviner CF map (.dat, .hdr) files.
4) Diviner H parameter map (.dat, .hdr) files.
5) Diviner rock abundance map (.dat, .hdr) files.
6) M3 Continuum removed spectra for the effusive units (.mat) file.
7) M3 continuum removed spectra for the explosive S-11 unit (.mat) file.
DOI: 10.17632/4p3m97pkkx
title: A comprehensive Drosophila resource to identify key functional interactions between SARS-CoV-2 factors and host proteins, Guichard, Lu, Kanca et al.

description: Table S1. List of the UAS-SARS-CoV-2 transgenic flies. The docking site and BDSC stock number of each fly line are provided.  UAS-NSP lines including a KOZAK sequence to increase expression levels do not include an immunological tag.
Table S2. Available UAS-human cDNA stocks encoding SARS-CoV-2 protein interactors. Stock numbers for Bloomington and Kyoto Drosophila stock centers are indicated. To obtain stocks from Kyoto, an account must be opened at the KDSC (https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi). After placing an order, a letter of No Permit Required (LONPR) must be provided, which can be obtained by requesting at USDA (brsnopermitrequired@usda.gov) and attaching a filled application, which can be found at:     https://bdsc.indiana.edu/pdf/USDA/LONPR_form.pdf. For lines that are not available yet, UAS clones are or will soon be available through the DGRC (searchable through https://dgrc.bio.indiana.edu/clones/Catalog under “Human ORF”). Current available clones can be found in https://dgrc.bio.indiana.edu/include/file/DGRC-HumanORF-clone-list-2023-05-05.xlsx.
Table S3. Available T2A-GAL4 or Kozak-GAL4 for fly ortholog candidates that encode for SARS-CoV-2 human interactors. For lines that have not been assigned a BDSC stock number at the time of publication, the CRIMIC number can be entered in the BDSC search bar to locate the stock number and line as it becomes available.
Table S4. Summary of lethality phenotypes induced by SARS-CoV-2 factors driven by DaGAL4 at 29oC, indicating the developmental timing of lethality.
Table S5. List of human interactors identified in five interactome studies 9 7,11 12 10, showing which interactors have been identified again in subsequent studies. Candidates identified in the 9 study are outlined in yellow.
DOI: 10.17632/5hmv255w5w
title: Raw data - Diffusion Tensor Imaging of the Kidney: Design and Evaluation of a Reliable Processing Pipeline

description: Research data