cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6256225
title: Data for Hays et al Nature Chemistry 2022 NCHEM-21050864A

description: Source data for Hays et al Nature Chem 2022<br> NCHEM-21050864A The source data relating to Figures 1-3 of the main article as well as source data for the Figures in the Supplementary Information are presented in separate directories, each with their own explicative "readme.txt" or "readme.doc". The main experimental and theoretical data are present in the "Figure 3" directory and its subdirectories.
DOI: 10.5281/zenodo.4603482
title: Manifestations of magnetotail flow channels in energetic particle low-altitude observations

description: The names of RCM-I simulation output files specify the simulation time in a format of "hhmmss". The stored quantities are, "I","J","COLAT","ALOCT","MLT","BNDLOC","XMIN","YMIN","FTV","BMIN","V", "BIRK_fromV(NH)","P(RCM),nPa", "PV_gamma","Vtotx", "Vtoty","Vx_exb","Vy_exb","vel_x","vel_y","Ey","PEDLAM", "PEDPSI", "HALL", "RCM_T_p","RCM_T_e","RCM_N_e","EFLUX","EAVG","f_i_50-75","f_i_75-113","f_i_113-170","f_i_170-250","f_i_39-115","f_e_50-75","f_e_75-105","f_e_105-150","f_e_150-225","f_e_225-315","f_e_40-20000","Vm".<br> For the first one hour of substorm growth phase, we upload output files with a ten minutes time interval . For 60-75min, 20 seconds and for 75-90min, one minute.
DOI: 10.5281/zenodo.6256598
title: msd-errors - Random walk data

description: The data related to the random walk components of the msd-error work, including truly random and temporarily anti-correlated random walks at a series of system and step size. These have either be analysed numerically or analytically (using kinisi, WLS, or OLS).<br><br>Created using showyourwork from this GitHub repo.<br>
DOI: 10.5281/zenodo.5977810
title: Simulated genetic data in a hierarchical metapopulation structure

description: The data are linked to a research article entitled: “<em>Interactions between microenvironment, selection and genetic architecture drive multiscale adaptation in a simulation experiment” </em>in<em> Journal of Evolutionary Biology</em> (see References). In this research on multiscale adaptation, we simulated a hierarchical metapopulation structure with four populations, two environments per population and three patches per environment, in a two-step procedure: an initialization step without selection, with eight combinations of mutation type, selfing rate and QTL number parameters (2 modes each); out of 200,000 simulated generations in each case, we chose one with appropriate characteristics as a starting point for the next step; a selection step with all possible combinations of the following parameters: environmental pattern (4 modes), environmental range (5 modes), selection intensity (4 modes), fecundity (3 modes). This resulted in 240 scenarios for each initialized metapopulation, i.e. 1,920 scenarios in total. Each scenario was replicated 10 times, i.e. 19,200 simulation runs. The archive includes all data needed to reproduce the simulations and analyses, or to re-use the simulated metapopulations for other analyses. It has the following structure (further detailed below): <strong>NemoScripts directory </strong>contains the <em>Nemo </em>input files used to perform simulations for the initialization step and the selection step; <strong>RScripts directory </strong>contains the <em>R</em> scripts to read the <em>Nemo </em>output files, compute synthetic variables(*), and produce the figures as they appear in the publication and supplementary material (*: long computations, therefore we also directly provide those synthetic variables in the Data directory); <strong>Data directory </strong>contains the <em>Nemo </em>output files, the synthetic variables, and other data needed to reproduce the figures; this directory can be used as a working directory for the <em>R</em> scripts (recommended). Running the following command in a terminal <strong><em>tar –xzvf Archive_PC_SOM_IS_FL.tar</em></strong> will create a directory named <strong><em>Archive_PC_SOM_IS_FL</em></strong>, which detailed content is described in the <strong><em>README.pdf</em></strong> file.<br> Warning: the extracted archive is large (460Go, &gt;40,000 files) and extraction may take some time.
description: {"references": ["Cubry, P., Oddou-Muratorio, S., Scotti, I., Lef\u00e8vre, F. Interactions between microenvironment, selection and genetic architecture drive multiscale adaptation in a simulation experiment. Journal of Evolutionary Biology, https://doi.org/10.1111/jeb.13988 ."]}
DOI: 10.5281/zenodo.5211158
title: Simulated genetic data in a hierarchical metapopulation structure

description: The data are linked to a research article entitled: “<em>Interactions between microenvironment, selection and genetic architecture drive multiscale adaptation in a simulation experiment” </em>in<em> Journal of Evolutionary Biology</em> (see References). In this research on multiscale adaptation, we simulated a hierarchical metapopulation structure with four populations, two environments per population and three patches per environment, in a two-step procedure: an initialization step without selection, with eight combinations of mutation type, selfing rate and QTL number parameters (2 modes each); out of 200,000 simulated generations in each case, we chose one with appropriate characteristics as a starting point for the next step; a selection step with all possible combinations of the following parameters: environmental pattern (4 modes), environmental range (5 modes), selection intensity (4 modes), fecundity (3 modes). This resulted in 240 scenarios for each initialized metapopulation, i.e. 1,920 scenarios in total. Each scenario was replicated 10 times, i.e. 19,200 simulation runs. The archive includes all data needed to reproduce the simulations and analyses, or to re-use the simulated metapopulations for other analyses. It has the following structure (further detailed below): <strong>NemoScripts directory </strong>contains the <em>Nemo </em>input files used to perform simulations for the initialization step and the selection step; <strong>RScripts directory </strong>contains the <em>R</em> scripts to read the <em>Nemo </em>output files, compute synthetic variables(*), and produce the figures as they appear in the publication and supplementary material (*: long computations, therefore we also directly provide those synthetic variables in the Data directory); <strong>Data directory </strong>contains the <em>Nemo </em>output files, the synthetic variables, and other data needed to reproduce the figures; this directory can be used as a working directory for the <em>R</em> scripts (recommended). Running the following command in a terminal <strong><em>tar –xzvf Archive_PC_SOM_IS_FL.tar</em></strong> will create a directory named <strong><em>Archive_PC_SOM_IS_FL</em></strong>, which detailed content is described in the <strong><em>README.pdf</em></strong> file.<br> Warning: the extracted archive is large (460Go, &gt;40,000 files) and extraction may take some time.
description: {"references": ["Cubry, P., Oddou-Muratorio, S., Scotti, I., Lef\u00e8vre, F. Interactions between microenvironment, selection and genetic architecture drive multiscale adaptation in a simulation experiment. Journal of Evolutionary Biology, https://doi.org/10.1111/jeb.13988 ."]}
DOI: 10.48370/ofd/xnyrdg
title: Phleogena faginea (Fr.: Fr.) Link, 216

description: Fungarium Makromycetes
DOI: 10.6084/m9.figshare.19161494
title: Medline Database Search strategy for 'Incentives for pregnant mother during antenatal care for better maternal and neonatal health outcomes: A Systematic Review Protocol'

description: Supplemental File 1: Search Strategy for Medline database<br>
DOI: 10.6084/m9.figshare.19161494.v2
title: Medline Database Search strategy for 'Incentives for pregnant mother during antenatal care for better maternal and neonatal health outcomes: A Systematic Review Protocol'

description: Supplemental File 1: Search Strategy for Medline database<br>
DOI: 10.5281/zenodo.6243431
title: PTUC

description: PTUC dataset
DOI: 10.5281/zenodo.6243430
title: PTUC

description: PTUC dataset
DOI: 10.1285/i17201632vxxivn43-44pi
title: Copertina
DOI: 10.1285/i17201632vxxivn43-44p1
title: Pagine iniziali e sommario
DOI: 10.5281/zenodo.5524640
title: Supplementary Dataset for Trenner et al. 2022: Evolution and Functions of Plant U-box proteins (PUBs): From protein quality control to signalling

description: This record contains additional information and a supplementary dataset of sequence alignment files and phylograms that support the publication: Trenner J, Monaghan J, Saeed B, Quint M, Shabek N, Trujillo M. 2022. Evolution and Functions of Plant U-box proteins (PUBs): From protein quality control to signalling. (submitted to Annual Review of Plant Biology) Included files: <em>Additional information.pdf</em> This file contains Supplementary Methods and References. <br> <em>Supp_Fig1_Ubox_full_protein_maximum_likelihood_phylogram_linear.pdf</em> A multiple protein sequence alignment by MAFFT of 1121 U-box protein sequences from 21 species and four outgroup sequences containing a RING finger domain (<em>A. thaliana</em> RBX1, <em>A. thaliana</em> RMA1, <em>S. cerevisiae</em> RAD18, <em>Homo sapiens</em> TRAF6 ) was used to infer a phylogenetic tree by maximum likelihood with IQ-TREE. The implemented ultrafast bootstrap approximation, set to 2000 bootstrap samples, was used for branch support. The consensus tree was annotated using iTOL. <em>Supp_Fig2_Ubox_domain_maximum_likelihood_phylogram_linear.pdf</em> In order to analyse specifically the evolution of the U-box domain, the U-box domain of the final 1121 U-box protein sequences as well as the RING finger domain of the four outgroup sequences were isolated and aligned by MAFFT. The U-box domain alignment was then used to infer a phylogenetic tree by maximum likelihood with IQ-TREE. The implemented ultrafast bootstrap approximation, set to 2000 bootstrap samples, was used for branch support. The consensus tree was annotated using iTOL. This tree was used to interpret the evolutionary history of U-box proteins in the main text. <em>MAFFT_alignment _1121seqs_Ubox_full_protein_plus_4seqs_RING_outgroup.fasta</em> Multiple protein sequences alignment by MAFFT of 1121 U-box full length protein sequences and four RING finger protein sequences, FASTA formatted. <em>MAFFT_alignment _1121seqs_Ubox_domain_plus_4seqs_RING_outgroup.fasta</em> Multiple protein sequences alignment by MAFFT of U-box domain sequences of 1121 U-box protein and four RING finger domain sequences of outgroup sequences, FASTA formatted. <em>Ubox_protein_sequences_information.xlsx</em> Spreadsheet with sequence ID information and source databases.
DOI: 10.5281/zenodo.5139625
title: Supplementary Dataset for Trenner et al. 2022: Evolution and Functions of Plant U-box proteins (PUBs): From protein quality control to signalling

description: This record contains additional information and a supplementary dataset of sequence alignment files and phylograms that support the publication: Trenner J, Monaghan J, Saeed B, Quint M, Shabek N, Trujillo M. 2022. Evolution and Functions of Plant U-box proteins (PUBs): From protein quality control to signalling. (submitted to Annual Review of Plant Biology) Included files: <em>Additional information.pdf</em> This file contains Supplementary Methods and References. <br> <em>Supp_Fig1_Ubox_full_protein_maximum_likelihood_phylogram_linear.pdf</em> A multiple protein sequence alignment by MAFFT of 1121 U-box protein sequences from 21 species and four outgroup sequences containing a RING finger domain (<em>A. thaliana</em> RBX1, <em>A. thaliana</em> RMA1, <em>S. cerevisiae</em> RAD18, <em>Homo sapiens</em> TRAF6 ) was used to infer a phylogenetic tree by maximum likelihood with IQ-TREE. The implemented ultrafast bootstrap approximation, set to 2000 bootstrap samples, was used for branch support. The consensus tree was annotated using iTOL. <em>Supp_Fig2_Ubox_domain_maximum_likelihood_phylogram_linear.pdf</em> In order to analyse specifically the evolution of the U-box domain, the U-box domain of the final 1121 U-box protein sequences as well as the RING finger domain of the four outgroup sequences were isolated and aligned by MAFFT. The U-box domain alignment was then used to infer a phylogenetic tree by maximum likelihood with IQ-TREE. The implemented ultrafast bootstrap approximation, set to 2000 bootstrap samples, was used for branch support. The consensus tree was annotated using iTOL. This tree was used to interpret the evolutionary history of U-box proteins in the main text. <em>MAFFT_alignment _1121seqs_Ubox_full_protein_plus_4seqs_RING_outgroup.fasta</em> Multiple protein sequences alignment by MAFFT of 1121 U-box full length protein sequences and four RING finger protein sequences, FASTA formatted. <em>MAFFT_alignment _1121seqs_Ubox_domain_plus_4seqs_RING_outgroup.fasta</em> Multiple protein sequences alignment by MAFFT of U-box domain sequences of 1121 U-box protein and four RING finger domain sequences of outgroup sequences, FASTA formatted. <em>Ubox_protein_sequences_information.xlsx</em> Spreadsheet with sequence ID information and source databases.
DOI: 10.1285/i17201632vxxivn43-44p7
title: Indice
DOI: 10.1285/i17201632vxxivn43-44p9
title: Editoriale: Coscienza, linguaggio, fisiologia: i livelli della spiegazione
DOI: 10.1285/i17201632vxxivn43-44p17
title: Buddhist thought as a psychosemantics: the nāmarūpa concept and cognitive psychology

description: Within scholars that accept a psychological theory of Buddhism, there are who have longtime recognized the central role of language, or rather of semantic perception. Thanks to the work of scholars such as Siderits, Garfield, Hamilton and Tzohar, the awareness that the Buddhist thought system is based on an analysis of semantic cognition has increased over the past few years. Since a rigorous comparison between the refined descriptive lexicon of the cognitive system proposed by Buddhist thought and the ideas of Ferdinand De Saussure has never been proposed, the aim of this article is the demonstration that there is a perfect correspondence between some concepts of Buddhist thought and Saussurian structural linguistics. It will be shown correspondence between nāmarūpa as 'linguistic sign', and sañña as 'semantic cognition'.
DOI: 10.1285/i17201632vxxivn43-44p45
title: Le emozioni e il piacere di apprendere

description: Il contributo intende esaminare il ruolo delle emozioni nell'apprendimento. A partire da una presentazione dei più recenti risultati di ricerca sui fattori che predispongono e accompagnano l'apprendimento, la ricerca vuole comprendere come le emozioni, ed in maniera particolare le emozioni positive, hanno un impatto maggiore nell'apprendimento e, al contrario, emozioni negative, generano vissuti spiacevoli capaci di ostacolare l'apprendimento.
description: The paper intends to examine the role of emotions in learning. Starting from a presentation of the most recent research results on the factors that predispose and accompany learning, the research aims to understand how emotions, and in particular positive emotions, have a greater impact on learning and, on the contrary, negative emotions, generate unpleasant experiences capable of hindering learning.
DOI: 10.1285/i17201632vxxivn43-44p63
title: La psicoterapia speciale di Lorenzo Calvi

description: Si espone il modello del trattamento psicologico del neurologo e psichiatra Lorenzo Calvi tanto peculiare da essere definito una "Psicoterapia speciale". Tale approccio è evidenziato con un emblematico caso clinico in cui si dimostra l'equazione "fenomenologia è psicoterapia", in stretta sintonia con il suo maestro, psichiatra-fenomenologo, Ferdinando Barison. La particolarità della psicoterapia calviana consiste nell'evidenziare una struttura trascendentale non direttamente percepibile, ma che agisce una volta manifestata, in cui è possibile la cura psichica attraverso un "viraggio" terapeutico condiviso tra terapeuta e paziente. L'accesso a questa struttura è data dall'epochè, nelle sue forme normali o psicopatologiche, che promuove una fenomenologia della cura. Questa precede e nello stesso tempo contiene la psicoterapia come convenzionalmente è intesa. Lo studio fenomenologico di Calvi pertanto è peculiare poiché si struttura come un'interfaccia tra l'invisibilità del mondo vissuto e la fattualità del mondo biologico.
description: The model of the psychological treatment of the neurologist and psychiatrist Lorenzo Calvi is expounded, so peculiar as to be defined as a "special psychotherapy". This approach is highlighted in an emblematic clinical case in which the equation "phenomenology is psychotherapy" is demonstrated, in close harmony with his teacher, psychiatrist-phenomenologist, Ferdinando Barison. The peculiarity of Calvi's psychotherapy consists in highlighting a trascendental structure that is not directly perceptible, but which acts once manifested, in which psychic treatment is possible through a "change" shared between therapist and patient. Access to this structure is given by the epochè, in its normal or psychopatological forms, which promotes a phenomenology of treatment. This precedes and at the same time contains psychotherapy as it is conventionally understood. Calvi's phenomenological study is therefore peculiar since it is structured as an interface between the invisibility of the lived world and the factuality of the biological world.
DOI: 10.5517/ccdc.csd.cc2926n8
title: CCDC 2117289: Experimental Crystal Structure Determination

description: Related Article: Xiao Hu, Yang Li, Hao Guo|2022|Tetrahedron Lett.|92|153673|doi:10.1016/j.tetlet.2022.153673
DOI: 10.5517/ccdc.csd.cc292f3y
title: CCDC 2117489: Experimental Crystal Structure Determination

description: Related Article: Ajay Suresh, Dhananjay Dey, Anila M Menon, Deepak Chopra|2022|J.Indian Chem.Soc.|99|100374|doi:10.1016/j.jics.2022.100374
DOI: 10.1285/i17201632vxxivn43-44p119
title: MARCO TETTAMANTI, Il cervello sintattico, Roma, Carocci Editore, 2020, pp. 127.
DOI: 10.1285/i17201632vxxivn43-44p124
title: CARLO SEMENZA, FRANCESCA FRANZON, CHIARA ZANINI, Il cervello morfologico, Roma, Carocci Editore, 2019, pp. 126.
DOI: 10.1285/i17201632vxxivn43-44p127
title: BALDO LAMI, Fantasma d'amore. Per una psicologia poetico-quantistica del profondo e dello spettro archetipico, Treviglio, Zephyro Edizioni, 2017, pp. 92.
DOI: 10.1285/i17201632vxxivn43-44p129
title: Progetto Alice, psicosintesi e pedagogia del conoscere

description: "Educating to self-consciousness" is the aim of educational experimentation proposed by the founders of the "Alice Project". Any child should be considered as a thinking being and made of emotions and beliefs. Nevertheless, living in a society where superficiality and pragmatism are predominant has leaded to not consider these aspects in child education. Indeed, in scholar environment any individual is trained to be socially realized, but unable to nurture higher levels of consciousness because the formal knowledge in schools is disconnected from interior experience and awareness. The Alice model aims to train human beings able to explicate their potentials beyond the phenomenal world: move from an anthropocentric view to a biocentric one in which the human being is a part of the Universe and not above it. Interior life of any individual is not disconnected from the real world, but an integral part of it, as it is well known in quantum physics. To achieve this goal, the traditional school program should be integrated with special activities such as mediation, yoga, visualisation techniques useful to get the ability to visualise and memorise, higher mindfulness, decreasing in aggressive behaviour and development in emotional intelligence. All these aims are successfully reached in the experimentation in India. It would be interesting that the traditional education opens up to the principles placed by the "Alice Project".
DOI: 10.1285/i17201632vxxivn43-44p199
title: Indici n. 1-42
DOI: 10.5281/zenodo.6038001
title: Data, code, and material associated with the paper "Biodiversity-related science communication in times of global crises"

description: Data, code, and material associated with the paper „Biodiversity-related science communication in times of global crises“, subm.: R script to run the analysis Data needed to reproduce the results and figures IPBES region data (from https://doi.org/10.5281/zenodo.3928281)
DOI: 10.5281/zenodo.5789030
title: Data, code, and material associated with the paper "Biodiversity-related science communication in times of global crises"

description: Data, code, and material associated with the paper „Biodiversity-related science communication in times of global crises“, subm.: R script to run the analysis Data needed to reproduce the results and figures IPBES region data (from https://doi.org/10.5281/zenodo.3928281)
DOI: 10.5281/zenodo.6199919
title: Autograft Wrapping Reinforcement in Adolescents Undergoing Ross Operation: A Tailored Coat

description: Dataset from Varrica A, Satriano A, Frigiola A, Giamberti A. Autograft Wrapping Reinforcement in Adolescents Undergoing Ross Operation: A Tailored Coat. Ann Thorac Surg. 2021 Jul 1:S0003-4975(21)01093-6. doi: 10.1016/j.athoracsur.2021.05.087. Epub ahead of print. PMID: 34217690. Abstract <strong>Background: </strong>The Ross operation is a good surgical option for the pediatric population with aortic valve disease. However, the need for reoperation due to aortic root dilatation remains the principal limitation of this procedure. We report a small series of adolescents who underwent the Ross operation with Gore-Tex (W. L. Gore & Associates, Flagstaff, AZ) membrane reinforcement to avoid the progressive dilatation of the neoaortic root. <strong>Methods: </strong>Between March 2002 and March 2010, 15 adolescent patients underwent a modified Ross procedure with the autograft wrapping with 0.1-mm Gore Preclude (W. L. Gore & Associates) pericardial membrane. Follow-up was performed by clinical and echocardiographic controls. <strong>Results: </strong>These patients were a mean age of 15 ± 1.4 years. The mean aortic cross-clamp time was 130 ± 17 minutes. The mean cardiopulmonary bypass time was 187 ± 27 minutes. There was no hospital mortality. The mean follow-up was 15 ± 2.5 years (range, 9.7-17.7 years). During the follow-up, 1 patient required aortic valve reoperation for cusps prolapse. The mean diameters of annulus (22.8 ± 1.8 mm vs 23.3 ± 1.5 mm, P = .12), aortic root (27.4 ± 1.4 mm vs 28.2 ± 0.8 mm, P = .09), and sinotubular junction (24.3 ± 1.1 mm vs 25.1 ± 0.7 mm, P = .11) were not statistically different between discharge and follow-up. <strong>Conclusions: </strong>The wrapping reinforcement autograft in the Ross procedure with Gore-Tex membrane is simple, safe, and does not require significant additional time. Our results showed good early and long-term outcomes for reoperation, aortic root dilatation, and aortic valve degeneration.