cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24481222.v2
title: Materials involved in the <i>Methanoperedens </i>ECEs paper

description: Genomes of <i>Methanoperedens </i>and associated ECEs, and other materials and information
DOI: 10.6084/m9.figshare.24768714.v1
title: 64 ASL Hand Shapes Data Glove Recordings

description: Human-to-human communication via the computer is mainly done using a keyboard or microphone. In the field of Virtual Reality (VR), where the most immersive experience possible is desired, the use of a keyboard contradicts this goal, while the use of a microphone is not always desirable (e.g. silent commands during task force training) or simply not possible (e.g. if the user has a hearing loss). Data gloves help to increase immersion within the VR as they correspond to our natural interaction. At the same time, they offer the possibility to accurately capture hand shapes, such as those used in non-verbal communication (e.g. thumbs up, okay gesture, ...) and in sign language. In this paper, we present a hand shape recognition system using Manus Prime X data gloves, including data acquisition, data preprocessing, and data classification to enable nonverbal communication within VR. We investigate the impact on accuracy and classification time of using an Outlier Detection and a Feature Selection approach in our data preprocessing. To obtain a more generalized approach, we also studied the impact of artificial Data Augmentation, i.e., we create new artificial data from the recorded and filtered data to augment the training dataset. With our approach, 56 different hand shapes could be distinguished with an accuracy of up to 93.28%. With a reduced number of 27 hand shapes, an accuracy of up to 95.55% could be achieved. Voting Meta-Classifier (VL2) has proven to be the most accurate, albeit slowest, classifier. A good alternative is Random Forest (RF), which was even able to achieve better accuracy values in a few cases and was generally somewhat faster. Outlier Detection has proven to be a effective approach, especially in improving classification time. Overall, we have shown that our hand shape recognition system using data gloves is suitable for communication within VR.64 different hand shapes were recorded from 20 participants, each with 3 repetitions. The files are structured as follows:1st line Name of the hand shape2nd line Left or right hand3rd line empty4th-23rd line Features Repetition 124th line empty25th - 44th line Features repetition 245th line blank46th - 65th line Features repetition 3The features are ordered as follows:Thumb spreadIndex Finger spreadMiddle Finger spreadRing Finger spreadPinky spreadThumb stretch CMCThumb stretch MCPThumb stretch IPIndex Finger stretch MCPIndex Finger stretch PIPIndex Finger stretch DIPMiddle Finger stretch MCPMiddle Finger stretch PIPMiddle Finger stretch DIPRing Finger stretch MCPRing Finger stretch PIPRing Finger stretch DIPPinky stretch MCPPinky stretch PIPPinky stretch DIP
DOI: 10.6084/m9.figshare.c.3604895_d4.v1
title: Additional file 2: Table S2. of Comparative genome analysis of Mycoplasma pneumoniae

description: Genes with no variants. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.1418234.v1
title: An Automatic Method to Extract Patent Citations from Google

description: Appendix A1-A16 report the top 10 highly cited articles in Google Patents from the Bing API search in the sixteen selected fields. It shows that there are some minority articles with many patent citations but with few or no Scopus citation.
DOI: 10.6084/m9.figshare.19146110.v1
title: DISEASES v2 (human, integrated, full)

description: This file contains the full set of gene–disease associations integrated from all sources of evidence in DISEASES v2.
DOI: 10.6084/m9.figshare.21995072.v8
title: Files for Main Figures

description: <b>Fig 1</b>Long_read_TE_fc: Transposable elements individual quantified featureCounts result using long-readShort_read_TE_fc: Transposable elements individual quantified featureCounts result using short-readLong_read_coding_genes_fc: Coding genes quantified featureCounts result using long-readShort_read_coding_genes_fc: Coding genes individual quantified featureCounts result using long-readInhouse_HCT116_telescope.tsv: Telescope output using inhouse HCT116 with random optionLocusMasterTE-TE_counts.tsv: LocusMasterTE output using inhouse HCT116telescope-TE_counts: Telescope output using inhouse HCT116<b>Fig 3</b>Simulated_reads_quantification_mat : Quantified TEs in TPM counts in simulated short-read measured by 7 approaches. File used for main figure 3.<b>Fig 4</b>6 Cell lines TE matrices quantified by long-read, Telescope (short-read), LocusMasterTE (short-read)SG-Nex_A549: TE counts by long-read, Telescope (short-read), LocusMasterTE (short-read) using A549 cell line in SG-NEx studySG-Nex_HepG2: TE counts by long-read, Telescope (short-read), LocusMasterTE (short-read) using HepG2 cell line in SG-NEx studySG-Nex_HCT116: TE counts by long-read, Telescope (short-read), LocusMasterTE (short-read) using HCT116 cell line in SG-NEx studySG-Nex_K562: TE counts by long-read, Telescope (short-read), LocusMasterTE (short-read) using K562 cell line in SG-NEx studySG-Nex_MCF-7: TE counts by long-read, Telescope (short-read), LocusMasterTE (short-read) using MCF-7 cell line in SG-NEx studyInhouse_HCT116: TE counts by long-read, Telescope (short-read), LocusMasterTE (short-read) using HCT116 sample generated by our lab<br><br><b>Fig 5</b><br>mutational_profile_TCGA-COAD: Mutational profiling of TCGA-COAD patients with MDA5-protected Alu elements from 5-azacytidine-treated ADAR wild-type samples.
DOI: 10.6084/m9.figshare.29155706.v1
title: Hong Kong 7913 trajectory data

description: Hong Kong 7913 trajectory data
DOI: 10.6084/m9.figshare.3453443.v1
title: Tectonic reconstruction and sediment provenance of a far-travelled oceanic nappe, Helgeland Nappe Complex, west-central Norway

description: The Helgeland Nappe Complex (HNC), part of the Uppermost Allochthon of the north-central Norwegian Caledonides, originated near the Laurentian margin and was transferred to Baltica during the closure of Iapetus in Late Silurian–Early Devonian time. The islands of Rødøy, Bolvær and Leka, located in the Sauren–Torghatten (S–T) nappe of the HNC, are composed of ultramafic and mafic basement rocks unconformably overlain by metaconglomerates and fine-grained metasedimentary rocks. Geochemical and isotopic characteristics of the basement rocks are consistent with formation in a supra-subduction zone setting. Overlying metasedimentary rocks record an increasing proportion of continental detritus supplied to the basins through time. Precambrian cratonic source regions supplied cobbles and other detritus. This source area may have been located in modern SE Greenland/Labrador or in the Lower Nappe of the HNC. The second alternative best accounts for the short transport distances required by the coarse-grained conglomerates. The maximum age of deposition is constrained by the age of the youngest zircon grain dated at 471±8 Ma. Final sedimentation, nappe thrusting and nappe stacking occurred in rapid succession during <em>c.</em> 480–475 Ma.
DOI: 10.6084/m9.figshare.5630233.v1
title: Supplementary Material for: A Native Haitian Woman with Unverricht-Lundborg Disease

description: Unverricht-Lundborg disease (ULD) is an autosomal recessive progressive myoclonic epilepsy. The prevalence is highest in specific European countries and North Africa. Affected individuals have myoclonic and tonic-clonic seizures and a variable degree of ataxia and cognitive impairment. We report a native Haitian woman with ULD who was wheelchair bound due to nearly continuous myoclonic seizures exacerbated by activity and emotional distress. The seizures and their dramatic increase with volitional activity were recorded during video electroencephalography monitoring. Rational antiepileptic drug therapy controlled the seizures well enough for the patient to achieve a level of independence she had not experienced in over 25 years.
DOI: 10.17632/zj3237z56k
title: Supplementary data for "How Does Competition Affect Retail Banking? Quasi-Experimental Evidence From Bank Mergers"

description: Supplementary data for "How Does Competition Affect Retail Banking? Quasi-Experimental Evidence From Bank Mergers" by Jack Liebersohn (Journal of Financial Economics, 2024).
DOI: 10.6084/m9.figshare.14578806.v1
title: Данные.xls

description: economic determinants of foreign direct investment<br>
DOI: 10.6084/m9.figshare.19729699.v2
title: S1_COVID19 data

description: COVID data used in the project
DOI: 10.6084/m9.figshare.27005521.v1
title: A comparative analysis of the amount of fluoride release, recharge, and re-release after uptake in three light-cure orthodontic bonding adhesives – An in-vitro study

description: Data : This project contains the following underlying data:· Sheet 1: Amount of fluoride(in ppm) released by three light-cure orthodontic bonding adhesives in all 3 groups.· Sheet 2: Amount of fluoride(in ppm) released after recharge with 1000ppm of sodium fluoride solution for 5 mins.
DOI: 10.6084/m9.figshare.29097461.v1
title: DPEP2 exhibits anti-cancer role via inhibiting metastasis and M2 macrophage in p53-loss NSCLC

description: DPEP2 exhibits anti-cancer role via inhibiting metastasis and M2 macrophage in p53-loss NSCLC
DOI: 10.6084/m9.figshare.8324639.v1
title: Tool for validation and import in herbarium database

description: Abstract Many biological collections databases feature data quality problems. On the existing computational resources, we present an import tool and data validation. The program applies filters to data submitted through a spreadsheet at the time of data import, streamlining the error-checking process. The validations presented were divided into three categories according to the taxonomic, geographical and general specimen collection data. Its implementation eliminated the errors in the data entry of new vouchers in the Herbarium of the Botanical Garden of Rio de Janeiro.
DOI: 10.17632/769cyvdznp
title: River water level height measurements obtained from river cameras near Tewkesbury

description: This dataset contains extracted water level observations (WLOs) from four river cameras located on rivers Severn and Avon near Tewkesbury, UK, and owned by Farson Digital Ltd The data is extracted from hourly daylight river camera images between 21st Nov – 5th Dec 2012. The dataset consists of spreadsheets containing extracted water level data for each camera along with necessary metadata, all available Farson Digital Ltd river camera images between 21st Nov – 5th Dec 2012, and 3D point measurements of the location of each camera and locations of all measured points in the field-of-view for each camera.
DOI: 10.6084/m9.figshare.12520010.v1
title: Different groups of ground-dwelling spiders share similar trophic niches in temperate forests - Data file

description: Different groups of ground-dwelling spiders share similar trophic niches in temperate forests - Data file<br>Column codes clarification:ID, Sample nameOrder - Taxa order for sampleFamily - Taxa family for sampleRegion - southern taiga is indicated by ST and broadleaved forest as BLFire - "fire" for areas, which were exposed to forest fire, "control" for non-treatedPlot - Plot ID Body size, mm - size group of studied predator individualsCollembola Col3F-Col5R - detection of Collembola by GC PCR, binaryLumbricidae 185F-14233R - detection of Lumbricidae by GC PCR, binaryOribatida ORI S14 - ORI A16 - detection of Oribatida by GC PCR, binaryStaphylinidae STA S6 - STA A3- detection of Staphylinidae by GC PCR, binaryDiptera DIP S16 - DIP A17 - detection of Diptera by GC PCR, binaryGamasina GAM S7 - GAM A8 - detection of Gamasina by GC PCR, binaryPCR-name - running sample ID used for PCRsd13C norm - standartized d13C valuesd15N norm - standartized d15N valuesSUMM PRED - the amount of predators detected by GC PCRSUMM HERB - the amount of NON-predators detected by GC PCRTOTAL POSITIVES - the total amount of groups detected by GC PCRLOG(Wet weight) - wet weight of studieв predator individuals, dec.log.(g)Hunting - hunting type of studied individuals, according to spider familyHabitat (Lowest forest tier)Habitat (Highest forest tier)Habitat group - according to the lowest and highest habitat forest tier combinationCollembola - expected feeding on Collembola, binaryDiptera - expected feeding on Diptera, binaryLepidoptera - expected feeding on Lepidoptera, binaryColeoptera - expected feeding on Coleoptera, binaryHemiptera - expected feeding on Hemiptera, binaryEsp.small - expected feeding on small prey (collembola and mites), binaryExpect VS GutContentCollembola - expected to observed feeding on Collembola, binaryDiptera - expected to observed feeding on Diptera, binaryColeoptera - expected to observed feeding on Coleoptera, binaryEsp.small - expected to observed feeding on small prey (collembola and mites), binarySUM of positive hits - expected to observed feeding hits summ
DOI: 10.6084/m9.figshare.21444948.v1
title: Supplementary data and research materials for "Vive Le Tour!? Estimating the place-based benefits of hosting the Tour de France"

description: This folder contains study data & STATA codes to replicate estimation results documented in: "Vive Le Tour!? Estimating the place-based benefits of hosting the Tour de France" by: Makkonen, T., and Mitze, T. (2023). Current Version 3: June 9, 2023
DOI: 10.6084/m9.figshare.21554547.v1
title: Thalamocortical boutons cluster by ON/OFF responses in mouse primary visual cortex

description: Datasets analyzed in <strong>Thalamocortical boutons cluster by ON/OFF responses in mouse primary visual cortex</strong> by Tring and Ringach, 2022
DOI: 10.6084/m9.figshare.26789494.v2
title: <b>Model output used to generate figures for "Process-based modelling up and down the beach states"</b>

description: <b>Model output used to generate figures for "Process-based modelling up and down the beach states"</b>-<b>Figure 1 Data:</b> folder contains model output used to generate figure 1-<b>Figure 2 Data:</b> folder contains model output used to generate figure 2-<b>Figure 3 Data:</b> folder contains model output used to generate figure 3-<b>upstate sequence.avi:</b> video showing the up-state beach sequence-<b>downstate sequence.avi:</b> video showing the down-state beach sequence
DOI: 10.6084/m9.figshare.949662.v1
title: Gaussian Job Archive for C4H13BO

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.17632/ps3j64sjbw
title: ETC ferroptosis

description: Wb and IHC data
DOI: 10.6084/m9.figshare.10675100.v1
title: Raw data (Force volume) from Characterization of interface properties of fluids by evaporation of a capillary bridge

description: The surface properties between two non-miscible fluids are key elements to understand mass transfer, chemistry and bio-chemistry at interfaces. In this paper, surface properties are investigated in evaporating and non-evaporating conditions. A capillary bridge between two large plates (similarly as a Hele-Shaw cell) is considered. The temporal evolution of surface forces and mass transfers due to evaporation of the liquid are measured. The force depends on surface properties of the substrate. It is adhesive in the wetting case and repulsive in the non-wetting case. The force is also shown to depend linearly on the volume of the capillary bridge <i>F</i> ∝ <i>V</i><sub>0</sub> and inversely to the height of the bridge. Modelling is performed to characterize both surface force and evaporation properties of the capillary bridge. The evaporation is shown to be diffusion driven and is decoupled from the bridge mechanics.
DOI: 10.6084/m9.figshare.19640916.v2
title: Supplementary file.docx

description: The above dataset is part of developing the Sustainable Diet Questionnaire for Indian adults. The data includes detailed analysis tables on face validity, content validity, construct validity, and test-retest reliability of the questionnaire. The finalized questionnaire is attached to the uploaded file.
DOI: 10.6084/m9.figshare.28497365.v1
title: <b>的模式及决定因素 </b><b>共生</b><b>N</b><sub><strong>N2</strong></sub><b>2种岩性类型岩土界面</b><b> in karst forests, Southwest China</b>

description: 由土壤重氮养生物介导的非共生 N2 固定 （ANF） 是主要的氮来源，对自然 N 限制的喀斯特森林生态系统中的氮可用性产生关键影响。尽管具有生态学意义，但喀斯特森林土壤中不同岩性岩性岩土界面处 ANF 的模式和决定因素仍未得到充分阐明。此外，岩性和岩土界面对 ANF 的交互作用及其潜在机制还有待全面探索。本研究以西南地区两种普遍岩性（石灰石 （LS） 和白云石 （DS））为研究对象，研究了岩土界面处森林土壤 ANF 与相邻块状土壤的模式、驱动因素和机理途径。建立了 4 个处理：LS （块状土壤上覆石灰岩）、DS （块状土壤上覆白云岩）、LI （岩土界面土壤上覆石灰岩）和 DI （岩土界面土壤上覆白云岩）。我们的结果表明，岩性、岩土界面及其相互作用 （岩性×界面） 对喀斯特森林土壤中的 ANF 速率和 nifH 基因丰度产生了统计学上的显着影响 （p &lt; 0.01）。无论岩性（白云石或石灰岩）如何，土壤-岩石界面的土壤 ANF 速率都明显优于相应的块状土壤，速率表现出 LI &gt; LS &gt; DI &gt; DS 的层次结构。此外，相对于块状土壤，土壤 nifH 基因丰度和土壤-土壤界面处的 SOC、SOC/STN、MBC 和 NO3− 等理化性质在岩-土界面处显著升高。随机森林和相关分析确定，土壤固氮功能微生物 （nifH 基因丰度） 和活性矿物组成 （（Ca+Mg）e/（Fe+Al）o） 是喀斯特森林土壤中 ANF 的主要决定因素，其次是 NO3−、STN、BG/（LAP+NAG） 和 SOC （p &lt; 0.05-0.01）。偏最小二乘路径模型 （PLS-PM） 表明，岩性通过非生物途径直接调节 （Ca+Mg）e/（Fe+Al）o 和 NO3− 间接调节 ANF，而岩土界面主要通过生物途径直接调节病毒 α、BG/（LAP+NAG） 和 nifH 间接影响 ANF （p &lt; 0.001）。值得注意的是，nifH、BG/（LAP+NAG） 和 Virusesα 对 ANF 产生了显著的积极影响，但 （Ca+Mg）e/（Fe+Al）o 和 NO3− 施加了显着的负面影响 （p &lt; 0.001）。这些发现为理解岩土界面处大量和持续的 ANF 提供了一个强大的框架，突出了其作为植物和微生物生长的关键生物可利用氮来源的潜力，从而缓解养分限制并加强退化喀斯特森林生态系统中的植被恢复。
DOI: 10.6084/m9.figshare.28787249.v1
title: Supplementary Material for: Tolerance evaluation of non-steroidal anti-inflammatory drug hypersensitivity in children: Is age the crucial factor?

description: Introduction: Little is known about the natural history of pediatric nonsteroidal anti-inflammatory drug hypersensitivity (NSAID-H). The aim of this prospective study was to evaluate tolerance development in pediatric patients with confirmed, immediate NSAID-H and to determine the risk factors for NSAID-H persistence.
Methods: Children with a confirmed diagnosis of NSAID-H were assessed for tolerance by drug provocation test (DPT) at least three years after diagnosis. Factors associated with developing tolerance in NSAID-H were investigated.
Results: Of the 34 cases with confirmed NSAID-H diagnosis, 23 (67.65%) were included. The median (range) age at the last DPT was 16.5 (13.2-20.4) years. Tolerance developed in 12 (52.1%) of the 23 patients evaluated. Survival analysis showed that median duration to develop tolerance was 6.16 years from the initial reaction (SE=18.6). ROC analysis gave a cut-off value for initial reaction age as ≤11.75 years in predicting NSAID-H tolerance with specificity 83.3%, sensitivity 81.8%, (AUC=0.830, 95%CI 0.616-0.952, p&lt;0.001). Univariate logistic regression analysis showed that the risk of persistence of NSAID-H was 1.3-fold higher with each additional year from the initial reaction [1/Odds Ratio(OR)] (OR=0.754, 95%CI 0.964-0.590; p=0.024). At the diagnostic DPT, in the tolerant group, urticaria (42.7%) was more common (p=0.006) and the persistent group reacted at a significantly lower cumulative dose (p=0.044).
Conclusion: Half of the patients with NSAID-H developed tolerance, around six years after the initial reaction. The probability of tolerance rises if the initial reaction occurs before the age of 11.75 years and if urticaria was observed at presentation. Reaction at low doses on diagnostic DPT may be a predictor of persistence.
DOI: 10.6084/m9.figshare.5124094.v1
title: Supplementary Material for: Neuropsychological Performance and Conversion to Alzheimer’s Disease in Early- Compared to Late-Onset Amnestic Mild Cognitive Impairment: CREDOS Study

description: <b><i>Background:</i></b> Amnestic mild cognitive impairment (aMCI) is regarded as a prodromal stage of Alzheimer’s disease (AD). Given that patients with early-onset AD (EOAD) and with late-onset AD (LOAD) are known to have different clinical courses, symptoms and neuroimaging findings, early-onset (EOMCI) and late-onset aMCI (LOMCI) might be expected to have similar differences as EOAD versus LOAD. <b><i>Methods:</i></b> Our study involving 425 patients with aMCI (124 EOMCI, 301 LOMCI), who were followed for around 1.5 years, and 958 normal control subjects (NC) investigated neuropsychological characteristics and prediction of progression to AD in patients with EOMCI versus LOMCI. Neuropsychological scores were compared between EOMCI, LOMCI and NC with analyses of covariance controlling age, gender, education and disease duration. The risk of AD conversion was evaluated by Cox proportional hazard analyses. <b><i>Results:</i></b> The baseline neuropsychological performances were comparable between EOMCI and LOMCI. Visuospatial memory for EOMCI and verbal memory scores for LOMCI were significant predictors of AD conversion. <b><i>Conclusion:</i></b> Our study indicates that EOMCI with visuospatial memory impairment, which implies underlying right predominant pathology, and LOMCI with poor verbal memory, which suggests underlying left predominant pathology, are individual conditions at an increased risk of conversion to AD.
DOI: 10.6084/m9.figshare.7804454.v2
title: Local and incoming stratification

description: Experimental study of the influence of local and incoming stratification on flow and dispersion in an isolated street canyon<br>
DOI: 10.17632/cvz9xdtwd2
title: The influence of shifting perspective on episodic and semantic details during autobiographical memory recall

description: Summary data of the effects of shifting perspective on autobiographical memory narratives and subjective ratings.
DOI: 10.6084/m9.figshare.21819690.v1
title: Coastal wetland maps in China's four large river deltas

description: Annual coastal wetland maps in Liaohe River Delta, Yellow River Delta, Yangtze River Delta, and Pearl River Delta during 1984-2020
DOI: 10.6084/m9.figshare.26536588.v1
title: Supplementary data_Figshare 2.docx

description: Formulation and sensory characteristics
DOI: 10.6084/m9.figshare.5044633.v4
title: Introduction to Statistical Philosophy

description: This video lecture and slide set presents a pragmatic statistical philosophy, including both frequentist and Bayesian ideas as well as providing careful definitions of inference, hypothesis testing, and P values.<br><br>Latest slide set with video, MMED 2017:- 'Dushoff-StatsPhilosophy.pdf'- 'Dushoff-Intro to Statistical Philosophy.mp4'<br>Latest slide set, MMED 2018:'DushoffStatisticalPhilosophyMMED2018.pdf'
DOI: 10.17632/wwy8z5mj7w
title: Influence of cultural factors on inter-country differences in indicators of innovation activity.

description: Input, output and Hofstede’s Cultural Dimensions of countries, which used in my Master's dissertation.
DOI: 10.6084/m9.figshare.13655645.v1
title: Supplementary Material Spec JCEM.docx

description: This study aimed at characterizing the relationship among hypothalamic metabolism and physical development in adolescents.
DOI: 10.6084/m9.figshare.13855091.v3
title: Mycoplasma anserisalpingitidis draft genomes

description: The following data are draft whole genome sequences of Mycoplasma anserisalpingitidis strains. The strains can be found in both multi fasta format and .gb annotated format. The annotation was done with the RAST server.
DOI: 10.6084/m9.figshare.19773070.v1
title: Resequencing worldwide spinach germplasm for identification of field resistance QTLs to downy mildew and assessment of genomic selection methods

description: SNP datasets for the association panel.