cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19221822.v1
title: Do spiders ride on the fear of scorpions? A cross-cultural eye tracking study

description: A dataset from a cross-cultural eye tracking experiment in the Republic of Somaliland and the Czech Republic, using a series of paired stimuli .<br>
DOI: 10.5281/zenodo.5862000
title: Sarcomere organization

description: Dataset of sarcomere organization, including filament directionality, network density, sarcomere length and z-Disc thickness
DOI: 10.5281/zenodo.5861999
title: Sarcomere organization

description: Dataset of sarcomere organization, including filament directionality, network density, sarcomere length and z-Disc thickness
DOI: 10.5281/zenodo.6246214
title: Sustainable Smart Tags with Two-Step Verification for Anticounterfeiting Triggered by the Photothermal Response of Upconverting Nanoparticles

description: Dataset accompanying figures published in the publication DOI: https://doi.org/10.5281/zenodo.6245930
DOI: 10.5281/zenodo.6246213
title: Sustainable Smart Tags with Two-Step Verification for Anticounterfeiting Triggered by the Photothermal Response of Upconverting Nanoparticles

description: Dataset accompanying figures published in the publication DOI: https://doi.org/10.5281/zenodo.6245930
DOI: 10.11588/data/pzgmss/cp0hbf
title: 03_Heidata_Rohdaten_Maier.zip

description: :unav
DOI: 10.5281/zenodo.6247305
title: Dataset related to article"Globus Pallidus Internus Deep Brain Stimulation Using Frame-Based vs. Frameless Stereotaxy in Dystonia: A Single-Center Experience"

description: Demographic, clinical (BFMDRS at baseline and in follow up), implantation (frame and frameless) data for the sample considered in the study.
DOI: 10.5281/zenodo.6247304
title: Dataset related to article"Globus Pallidus Internus Deep Brain Stimulation Using Frame-Based vs. Frameless Stereotaxy in Dystonia: A Single-Center Experience"

description: Demographic, clinical (BFMDRS at baseline and in follow up), implantation (frame and frameless) data for the sample considered in the study.
DOI: 10.5281/zenodo.5789473
title: Summer Rainfall Scenarios and Climate Change Factor Projections over Wanzhou County, China

description: This dataset consists of rainfall scenarios and ensemble projections of extreme daily rainfall and mean summer season rainfall over Wanzhou County, China. <strong>Precipitation Reference Period (1979-2018)</strong> The reference scenario rainfall covers the period of 1979-2018, and is derived from the China Meteorological Forcing Dataset (https://data.tpdc.ac.cn/en/data/8028b944-daaa-4511-8769-965612652c49/). The extreme daily rainfall (in mm/day) is derived from Gumbel distributions fitted to monthly maximum daily rainfall covering the months of June to August. A spatial distribution of return periods from 2, 5, 10 20, 50 and 100 years for this scenario were derived and included in this dataset. The mean seasonal rainfall scenario covers the average daily rainfall (in mm/day) for the months of May to July to represent antecedent rainfall conditions of that could trigger shallow landslides during the summer season. Spatial extent: Wanzhou County, China Spatial Resolution: 0.1 degrees x 0.1 degrees Time period: 1979-2018 Data Format: .csv files (.xyz file extensions) Variable: Rainfall (pr) Units: mm/day <strong>Ensemble Projections and Climate Change Factors</strong> The ensemble climate change projections cover two periods: Mid-21st Century (2021-2060) and Late-21st Century (2061-2100). The influence of climate change is assessed through climate change factors that represent a multiplicative factor of change between present and future climate model outputs. The ensemble projections are the mean climate change factor derived from four bias-corrected Regional Climate Model outputs. The ensemble consisted of the results REMO2015 and RegCM4 models that dynamically downscaled HadGEM2-ES, MPI-ESM-ML, and MPI-ESM-MR model outputs (https://esgf-data.dkrz.de/search/cordex-dkrz/). The bias correction was performed using the quantile delta method. An empirical transfer function for daily rainfall was used to derive the mean seasonal rainfall scenario, while a parametric (Gumbel distribution) transfer function was used to derive on the monthly maxima for the extreme daily rainfall scenarios. Spatial extent: Wanzhou County, China Spatial Resolution: 0.22 degrees x 0.22 degrees Time periods: Mid-21st Century (2021-2060) & Late-21st Century (2061-2100) Data Format: .csv files Variable: Climate Change Factor (ccf) Unit: Dimensionless Included ensemble projection statistics: Standard deviation (sd) Coefficient of Variation (cv)
DOI: 10.5281/zenodo.5789472
title: Summer Rainfall Scenarios and Climate Change Factor Projections over Wanzhou County, China

description: This dataset consists of rainfall scenarios and ensemble projections of extreme daily rainfall and mean summer season rainfall over Wanzhou County, China. <strong>Precipitation Reference Period (1979-2018)</strong> The reference scenario rainfall covers the period of 1979-2018, and is derived from the China Meteorological Forcing Dataset (https://data.tpdc.ac.cn/en/data/8028b944-daaa-4511-8769-965612652c49/). The extreme daily rainfall (in mm/day) is derived from Gumbel distributions fitted to monthly maximum daily rainfall covering the months of June to August. A spatial distribution of return periods from 2, 5, 10 20, 50 and 100 years for this scenario were derived and included in this dataset. The mean seasonal rainfall scenario covers the average daily rainfall (in mm/day) for the months of May to July to represent antecedent rainfall conditions of that could trigger shallow landslides during the summer season. Spatial extent: Wanzhou County, China Spatial Resolution: 0.1 degrees x 0.1 degrees Time period: 1979-2018 Data Format: .csv files (.xyz file extensions) Variable: Rainfall (pr) Units: mm/day <strong>Ensemble Projections and Climate Change Factors</strong> The ensemble climate change projections cover two periods: Mid-21st Century (2021-2060) and Late-21st Century (2061-2100). The influence of climate change is assessed through climate change factors that represent a multiplicative factor of change between present and future climate model outputs. The ensemble projections are the mean climate change factor derived from four bias-corrected Regional Climate Model outputs. The ensemble consisted of the results REMO2015 and RegCM4 models that dynamically downscaled HadGEM2-ES, MPI-ESM-ML, and MPI-ESM-MR model outputs (https://esgf-data.dkrz.de/search/cordex-dkrz/). The bias correction was performed using the quantile delta method. An empirical transfer function for daily rainfall was used to derive the mean seasonal rainfall scenario, while a parametric (Gumbel distribution) transfer function was used to derive on the monthly maxima for the extreme daily rainfall scenarios. Spatial extent: Wanzhou County, China Spatial Resolution: 0.22 degrees x 0.22 degrees Time periods: Mid-21st Century (2021-2060) & Late-21st Century (2061-2100) Data Format: .csv files Variable: Climate Change Factor (ccf) Unit: Dimensionless Included ensemble projection statistics: Standard deviation (sd) Coefficient of Variation (cv)
DOI: 10.48370/ofd/wr2cb4
title: Phleogena faginea (Fr.: Fr.) Link, 31

description: Fungarium Makromycetes
DOI: 10.23729/760368b2-3d82-4db5-9507-6fd0d789f63e
title: CircVol LabMix Day 0 preview

description: Day 0 scans of the lab-mixed samples of CircVol. Collective CircVol entry: https://doi.org/10.23729/f9ce14e4-a657-471e-b755-37ff4b902b3f Preview of PAS-dataset https://doi.org/10.23729/a4c650b5-321d-486f-9931-a19e2d998b82
DOI: 10.5281/zenodo.6255865
title: msd-errors - Random walk data

description: The data related to the random walk components of the msd-error work, including truly random and temporarily anti-correlated random walks at a series of system and step size. These have either be analysed numerically or analytically (using kinisi, WLS, or OLS).<br><br>Created using showyourwork from this GitHub repo.<br>
DOI: 10.5281/zenodo.6125995
title: Dataset 1 for: Multi-eGO: an in-silico lens to look into protein aggregation kinetics at atomic resolution

description: <strong>Dataset</strong> Molecular dynamics simulation trajectories of TTR peptide monomers and aggregation kinetics: Amber99sb_disp: TTR monomer in explicit solvent using amber99disp force field. multi-GO-monomer: TTR monomer simulation using the multi-GO force field. multi-eGO-monomer: TTR monomer simulation using the multi-eGO ensemble force field. multi-eGO-XXmM-Y: aggregation kinetics simulations of TTR using the multi-eGO force field at XXmM concentration replicate Y. .ipynb files: analysis script employed for the aggregation kinetics simulations. TTR aggregation kinetics movies.
DOI: 10.5281/zenodo.6125994
title: Dataset 1 for: Multi-eGO: an in-silico lens to look into protein aggregation kinetics at atomic resolution

description: <strong>Dataset</strong> Molecular dynamics simulation trajectories of TTR peptide monomers and aggregation kinetics: Amber99sb_disp: TTR monomer in explicit solvent using amber99disp force field. multi-GO-monomer: TTR monomer simulation using the multi-GO force field. multi-eGO-monomer: TTR monomer simulation using the multi-eGO ensemble force field. multi-eGO-XXmM-Y: aggregation kinetics simulations of TTR using the multi-eGO force field at XXmM concentration replicate Y. .ipynb files: analysis script employed for the aggregation kinetics simulations. TTR aggregation kinetics movies.
DOI: 10.5281/zenodo.6125424
title: Dataset 2 for: Multi-eGO: an in-silico lens to look into protein aggregation kinetics at atomic resolution

description: <strong>Dataset</strong> Molecular dynamics simulation trajectories of TTR peptide aggregation kinetics: multi-eGO-XXmM-Y: aggregation kinetics simulations of TTR using the multi-eGO force field at XXmM concentration replicate Y.
DOI: 10.5281/zenodo.6125423
title: Dataset 2 for: Multi-eGO: an in-silico lens to look into protein aggregation kinetics at atomic resolution

description: <strong>Dataset</strong> Molecular dynamics simulation trajectories of TTR peptide aggregation kinetics: multi-eGO-XXmM-Y: aggregation kinetics simulations of TTR using the multi-eGO force field at XXmM concentration replicate Y.
DOI: 10.5281/zenodo.6256015
title: Number space is made by response space: Evidence from left spatial neglect

description: Whether the semantic representation of numbers is endowed with an intrinsic spatial component, so that smaller numbers are inherently represented to the left of larger ones on a Mental Number Line (MNL), is a central matter of debate in numerical cognition. To gain an insight into this issue, we investigated the performance of right brain damaged patients with left spatial neglect (N+) in a bimanual Magnitude Comparison SNARC task and in a uni-manual Magnitude Comparison Go/No-Go task (i.e. “is the number smaller or larger than 5?“). While the first task requires the use of contrasting left/right spatial codes for response selection, the second task does not require the use of these codes. In line with previous evidence, in the SNARC task N+ patients displayed a significant asymmetry in Reaction Times (RTs), with slower RTs to number “4”, that was immediately precedent to the numerical reference “5”, with respect to the number “6”, that immediately followed the same reference. This RTs asymmetry was correlated with lesion of white matter tracts, i.e. Fronto-Occipital-Fasciculus, that allows prefrontal Ba 8 and 46 to regulate the distribution of attention on sensory and memory traces in posterior occipital, temporal and parietal areas. In contrast, no similar RTs asymmetry was found in the Go/No-Go task. These findings suggest that while in the SNARC task numbers get mentally organised from left-to-right as a function of their increasing magnitude, so that N+ patients display a delay in the processing of number-magnitudes that are immediately smaller than a given numerical reference, in the Go/No-Go task no left-to-right organization is activated. These results support the idea that it is the use of contrasting left/right spatial codes, whether motor or conceptual, that triggers the generation of a spatially left-to-right organised MNL and that the representation of number magnitude is not endowed with an inherent spatial component.
DOI: 10.5281/zenodo.6256014
title: Number space is made by response space: Evidence from left spatial neglect

description: Whether the semantic representation of numbers is endowed with an intrinsic spatial component, so that smaller numbers are inherently represented to the left of larger ones on a Mental Number Line (MNL), is a central matter of debate in numerical cognition. To gain an insight into this issue, we investigated the performance of right brain damaged patients with left spatial neglect (N+) in a bimanual Magnitude Comparison SNARC task and in a uni-manual Magnitude Comparison Go/No-Go task (i.e. “is the number smaller or larger than 5?“). While the first task requires the use of contrasting left/right spatial codes for response selection, the second task does not require the use of these codes. In line with previous evidence, in the SNARC task N+ patients displayed a significant asymmetry in Reaction Times (RTs), with slower RTs to number “4”, that was immediately precedent to the numerical reference “5”, with respect to the number “6”, that immediately followed the same reference. This RTs asymmetry was correlated with lesion of white matter tracts, i.e. Fronto-Occipital-Fasciculus, that allows prefrontal Ba 8 and 46 to regulate the distribution of attention on sensory and memory traces in posterior occipital, temporal and parietal areas. In contrast, no similar RTs asymmetry was found in the Go/No-Go task. These findings suggest that while in the SNARC task numbers get mentally organised from left-to-right as a function of their increasing magnitude, so that N+ patients display a delay in the processing of number-magnitudes that are immediately smaller than a given numerical reference, in the Go/No-Go task no left-to-right organization is activated. These results support the idea that it is the use of contrasting left/right spatial codes, whether motor or conceptual, that triggers the generation of a spatially left-to-right organised MNL and that the representation of number magnitude is not endowed with an inherent spatial component.
DOI: 10.5281/zenodo.6255991
title: Quantitative comparison of tracking performance using TrackMate-Helper.

description: TrackMate now offers multiple detections and linking algorithms. Each of these algorithms needs to be configured with a parameter set that can take a wide range of values. While adequate values for these parameters can often be estimated intuitively, a systematic approach is often desirable. Indeed optimizing tracking parameters through visual assessment can be difficult when following many objects. To this end, we developed a new tool called TrackMate-Helper, which performs automatic parameter sweeps over any combination of detector and tracker available in TrackMate and measures the tracking results accuracy using the Cell-Tracking-Challenge (CTC) metrics. TrackMate-Helper requires an input image and the corresponding tracking ground-truth. Importantly, TrackMate-Helper is built as an end-user tool with a user-friendly interface that conveniently allows configuring parameter sweeps over many combinations of tracking parameters. We envision that this systematic approach will benefit medium and high-throughput automatic tracking studies. By optimizing the tracking parameters on one movie, users will be able to find optimal tracking parameters for the rest of their dataset. Here, we used TrackMate-Helper to assess the performance of TrackMate on four datasets that cover a wide range of biological and imaging situations: Migrating cancer cells imaged using fluorescence microscopy to visualize their nuclei. In this dataset, the cells are densely packed and divided during the experiment . Migrating T-cells imaged using phase-contrast microscopy). Neisseria meningitidis bacterial growth on agar pads. The bacteria are fluorescently labeled to visualize their membrane. Starting from a few single bacteria, the cells quickly divide several times and swarm the field of view. Glioblastoma-astrocytoma cells imaged using bright-field microscopy at high resolution. The table included reports the best results for each detector and tracker combination. We tested from 3000 to 20000 different parameter settings for each combination.
DOI: 10.5281/zenodo.6087728
title: Quantitative comparison of tracking performance using TrackMate-Helper.

description: TrackMate now offers multiple detections and linking algorithms. Each of these algorithms needs to be configured with a parameter set that can take a wide range of values. While adequate values for these parameters can often be estimated intuitively, a systematic approach is often desirable. Indeed optimizing tracking parameters through visual assessment can be difficult when following many objects. To this end, we developed a new tool called TrackMate-Helper, which performs automatic parameter sweeps over any combination of detector and tracker available in TrackMate and measures the tracking results accuracy using the Cell-Tracking-Challenge (CTC) metrics. TrackMate-Helper requires an input image and the corresponding tracking ground-truth. Importantly, TrackMate-Helper is built as an end-user tool with a user-friendly interface that conveniently allows configuring parameter sweeps over many combinations of tracking parameters. We envision that this systematic approach will benefit medium and high-throughput automatic tracking studies. By optimizing the tracking parameters on one movie, users will be able to find optimal tracking parameters for the rest of their dataset. Here, we used TrackMate-Helper to assess the performance of TrackMate on four datasets that cover a wide range of biological and imaging situations: Migrating cancer cells imaged using fluorescence microscopy to visualize their nuclei. In this dataset, the cells are densely packed and divided during the experiment . Migrating T-cells imaged using phase-contrast microscopy). Neisseria meningitidis bacterial growth on agar pads. The bacteria are fluorescently labeled to visualize their membrane. Starting from a few single bacteria, the cells quickly divide several times and swarm the field of view. Glioblastoma-astrocytoma cells imaged using bright-field microscopy at high resolution. The table included reports the best results for each detector and tracker combination. We tested from 3000 to 20000 different parameter settings for each combination.
DOI: 10.5281/zenodo.6250180
title: Raw and analyzed data for manuscript "Dielectric barrier discharge plasma reduction of oxidized copper surfaces in an Ar/SiH4 atmosphere"

description: <strong>Abstract:</strong> Nowadays, cold plasma techniques like dielectric barrier discharge (DBD) plasmas have attracted considerable interest in view of high deoxidation efficiencies as well as relative simplicity of setups. Although DBD plasma deoxidation of copper has been mainly studied in Ar/H<sub>2</sub> mixtures, there is no information on reduction performance of such methods in other protective atmospheres. In this study, the reduction of natively oxidized copper surfaces using a DBD plasma in an Ar/SiH<sub>4</sub> atmosphere at 100 hPa and 20 °C was investigated. The influence of a silane gas on the deoxidation performance was studied by varying the SiH<sub>4</sub> concentration from 0.0 to 0.5 vol%. An addition of a SiH<sub>4</sub> gas to an Ar atmosphere results in the increase of the deoxidation effect of a DBD plasma, so almost all Cu<sub>2</sub>O was reduced after around 10 s of treatment in 0.1 vol% silane. Surface morphology analysis showed formation of particles after Ar/SiH<sub>4</sub> plasma treatments, which can be cleaned from the surfaces by wiping. Additionally, characterization of the plasma phase indicated the presence of SiH<sup>*</sup> radicals, which likely play a role in the deoxidation effect. Moreover, an elimination of residual oxygen and nitrogen species in Ar by addition of SiH<sub>4</sub> was observed.
DOI: 10.5281/zenodo.6256031
title: DATASET RELATED TO ARTICLE " Different circuitry dysfunction in drug-naive patients with juvenile myoclonic epilepsy and juvenile absence epilepsy"

description: The dataset contains the connectivity data of patients involved in the study at title
description: STUDY SUPPORTED BY ITALIAN MINISTRY OF HEALTH (FONDI RICERCA CORRENTE)
DOI: 10.5281/zenodo.6256030
title: DATASET RELATED TO ARTICLE " Different circuitry dysfunction in drug-naive patients with juvenile myoclonic epilepsy and juvenile absence epilepsy"

description: The dataset contains the connectivity data of patients involved in the study at title
description: STUDY SUPPORTED BY ITALIAN MINISTRY OF HEALTH (FONDI RICERCA CORRENTE)
DOI: 10.48370/ofd/uruitq
title: Phleogena faginea (Fr.: Fr.) Link, 54

description: Fungarium Makromycetes
DOI: 10.6084/m9.figshare.19228977
title: Data and codes for Hoven et al. (2022). Communications Biology

description: Contains all codes and data necessary to reproduce the results and figures reported in Hoven et al. (2022): Motivational signals disrupt metacognitive signals in the human ventromedial prefrontal cortex. Communications Biology<br>
DOI: 10.6084/m9.figshare.19228758
title: Sr-Nd isotopic values of the &lt;2 μm and &lt;63 μm grain-size fractions from the upper 274 cm of IODP Site U1456.

description: Sr-Nd isotopic values of the &lt;2 μm and &lt;63 μm grain-size fractions from the upper 274 cm of IODP Site U1456. Sample depths (cm) in core, age of the sediments (ka), 87Sr/86Sr ratios, 143Nd/144Nd ratios and εNd values. <br>
DOI: 10.6084/m9.figshare.19228758.v1
title: Sr-Nd isotopic values of the &lt;2 μm and &lt;63 μm grain-size fractions from the upper 274 cm of IODP Site U1456.

description: Sr-Nd isotopic values of the &lt;2 μm and &lt;63 μm grain-size fractions from the upper 274 cm of IODP Site U1456. Sample depths (cm) in core, age of the sediments (ka), 87Sr/86Sr ratios, 143Nd/144Nd ratios and εNd values. <br>
DOI: 10.5281/zenodo.6256236
title: Insect cuticular hydrocarbon composition influences their interaction with spider capture threads - Raw data

description: Raw data of the manuscript entitled "Insect cuticular hydrocarbon composition influences their interaction with spider capture threads", published in the Journal of Experimental Biology
DOI: 10.5281/zenodo.6256235
title: Insect cuticular hydrocarbon composition influences their interaction with spider capture threads - Raw data

description: Raw data of the manuscript entitled "Insect cuticular hydrocarbon composition influences their interaction with spider capture threads", published in the Journal of Experimental Biology
DOI: 10.34740/kaggle/dsv/3223779
title: COVID Vaccination in World (updated daily)
DOI: 10.6084/m9.figshare.19114406
title: 000

description: 0000<br>
DOI: 10.6084/m9.figshare.19114406.v2
title: 000

description: 0000<br>
DOI: 10.5525/gla.researchdata.1253
title: Gay Life 1980-1981 oral history transcripts

description: This dataset records the transcripts of an oral history featuring Gay Life’s producers
DOI: 10.5281/zenodo.6256226
title: Data for Hays et al Nature Chemistry 2022 NCHEM-21050864A

description: Source data for Hays et al Nature Chem 2022<br> NCHEM-21050864A The source data relating to Figures 1-3 of the main article as well as source data for the Figures in the Supplementary Information are presented in separate directories, each with their own explicative "readme.txt" or "readme.doc". The main experimental and theoretical data are present in the "Figure 3" directory and its subdirectories.