cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14848774
title: 20250206 SPS Transfer Function Data (New Scope)

description: Raw data from the SPS cable transfer functions. Transfer functions were measured from after the hybrid combiner to the oscilloscope in the SPS Faraday cage in BA3. The oscilloscope used to measure the data published here is a new scope (Tektronix MSO66B 6 series) which will be replacing the previous MD scope (Tektronix DPO 7254C).
DOI: 10.5284/1126054
title: Images and Report from a Level 1 Basic Building Survey at Ferryhill Station Primary School, Ferryhill, County Durham, April 2024

description: This collection comprises images and a report from a level 1 basic building survey of Ferryhill Station Primary School, Ferryhill, County Durham. This work was undertaken by York Archaeology in April 2024. The heritage statement has demonstrated that the significance of Ferryhill Station Primary School derives from its historic and architectural interests, in part derived from its contribution to the understanding of Ferryhill Station's historical development and the increased demand for educational facilities owing to population growth associated with the development of the mining and lime burning industries. The survival of historic fabric within the buildings illustrates the prevailing ideas that governed the design of schools during the period. The architectural interest is derived from an appreciation of the polite domestic revival style of parts of the school and the ideas it imbued, as well as the use of traditional materials that provide continuity between the site and surrounding historic environment.
DOI: 10.15468/dl.43jr85
title: Occurrence Download

description: A dataset containing 29561405 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year 1999-2025"
 ]
}

 The dataset includes 29561405 records from 3111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023189-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/z5kz7n
title: A new species of Agenamyia Albuquerque (Diptera: Muscidae) from Colombia

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ramos-Pastrana, Yardany, Córdoba-Suarez, Eric, Fogaça, João M. (2024): A new species of Agenamyia Albuquerque (Diptera: Muscidae) from Colombia. Zootaxa 5514 (1): 66-72, DOI: 10.11646/zootaxa.5514.1.4, URL: http://dx.doi.org/10.11646/zootaxa.5514.1.4AbstractAgenamyia Albuquerque, 1953 is exclusive of the Neotropical region and is a poorly studied group. Here we described one new species from Colombia, namely Agenamyia diversa sp. nov. (type-locality: Garzón, Las Mercedes, Parque Natural Regional Cerro Páramo Miraflores), and present an updated identification key to segregate all the species, including color images and illustrations of male terminalia. The distribution of all species from Colombia is mapped.
DOI: 10.15468/cdtnby
title: Integrative lineage delimitation in rodents of the Ctenomys Corrientes group

description: This dataset contains the digitized treatments in Plazi based on the original journal article Caraballo, Diego A., Rossi, María Susana (2018): Integrative lineage delimitation in rodents of the Ctenomys Corrientes group. Mammalia (Warsaw, Poland) 82 (1): 35-47, DOI: 10.1515/mammalia-2016-0162, URL: http://dx.doi.org/10.1515/mammalia-2016-0162Abstract: The tuco-tucos rodents (genus Ctenomys) of the Corrientes group comprise several populations that inhabit the vast area under the influence of the Iberá wetland. Lineage delimitation within the recently diverged Corrientes group is a challenging task as morphological differentiation is not conspicuous between populations. However, delimitation is crucial for evolutionary studies and conservation issues. In this study, we performed a phylogenetic analysis including cytochrome b (cyt-b) sequences from taxa that had never been studied in a comprehensive context. We integrated previously published chromosomal studies, mitochondrial phylogenies and simple sequence repeat (SSR) variability analyses, and applied a delimitation criterion over the basis of chromosomal incompatibilities and genetic exclusivity. Under this integrative approach seven independently evolving lineages were delimited in the Corrientes group: Ctenomys roigi, which conserves its former definition, Ctenomys dorbignyi and Ctenomys perrensi complex which were redefined, Sarandicito which includes the population of Paraje Sarandicito and probably a group of nearby poorly studied populations, and Iberá i, ii and iii distributed at both sides of the Iberá wetland. We discuss future perspectives to evaluate the proposed lineages and conservation issues concerning these tuco-tucos.
DOI: 10.15468/gkm5ft
title: Rare spider species (Araneae) from the Giant Mountains and the Izera Mountains - new records for the fauna of Poland

description: This dataset contains the digitized treatments in Plazi based on the original journal article WIŚNIEWSKI, Konrad, WESOŁOWSKA, Wanda (2016): Rare spider species (Araneae) from the Giant Mountains and the Izera Mountains - new records for the fauna of Poland. Fragmenta Faunistica 59 (2): 115-120, DOI: 10.3161/00159301FF2016.59.2.115, URL: http://dx.doi.org/10.3161/00159301ff2016.59.2.115Abstract: We present data on four spider species (Araneae) new for the fauna of Poland. The spiders were found predominantly in the mires of the Giant Mountains and the Izera Mountains (the Western Sudetes). Some of these habitats are the transborder mires between Poland and the Czech Republic. The presented species are: Erigone cristatopalpus, Panamomops sulcifrons, Theridion boesenbergi, Gnaphosa lapponum. Each of these spiders is rare or lives in specific habitat.
DOI: 10.6084/m9.figshare.26630056.v1
title: Additional file 15 of A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs

description: Additional file 15: Table S1. Age and sex distribution of dogs involved in the study. Table S2. Correlation analysis between bacterial taxa and clinical score (CADESI-04) to select the skin sites for further analysis. Table S3. Statistical summary of the differentially abundant skin bacterial taxa at the phylum level. Table S4. Statistical summary of the differentially abundant skin bacteria at the genus level. Table S5. Correlation of Staphylococcus abundance and CADESI-04 score in each skin site was compared between dog groups. Table S6. Mean relative abundance of the 10 most abundant Staphylococcus spp. in the skin samples form healthy, cADpre, cADpost and cADtreat dogs. Data from 12 skin sites are presented. Percent identity of the best hit from NCBI Nucleotide BLAST is presented in each classified species. Table S7. Data related to Fig. 3. Statistical summary of differentially abundant Staphylococcus spp. between dog groups. Table S8. Mean relative abundance of bacterial taxa at the phylum level in faecal samples from all four dog groups. Table S9. Mean relative abundance of bacterial taxa at the genus level in the faecal samples in all four dog groups. Table S10. Statistical summary of the differentially abundant faecal and skin bacterial taxa between mtDNA haplogroups A and C.
DOI: 10.6084/m9.figshare.26581955
title: Additional file 7 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 7: Table S3. Protein content of Hyalomma asiaticum hemolymph-derived EVs identified using the MASCOT search engine
DOI: 10.6084/m9.figshare.26581964
title: Additional file 10 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 10: Table S6. KEGG pathway analysis of proteins identified from Rhipicephalus haemaphysaloides hemolymph-derived EVs.
DOI: 10.6084/m9.figshare.26581964.v1
title: Additional file 10 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 10: Table S6. KEGG pathway analysis of proteins identified from Rhipicephalus haemaphysaloides hemolymph-derived EVs.
DOI: 10.6084/m9.figshare.26581979
title: Additional file 15 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 15: Table S11. Host proteins identified in hemolymph EVs.
DOI: 10.6084/m9.figshare.26581970
title: Additional file 12 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 12: Table S8. Protein content of Rhipicephalus haemaphysaloides hemolymph identified using the MASCOT search engine.
DOI: 10.6084/m9.figshare.26581976.v1
title: Additional file 14 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 14: Table S10. Unique and shared proteins identified between the tick hemolymph and EVs.
DOI: 10.6084/m9.figshare.26581958.v1
title: Additional file 8 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 8: Table S4. GO analysis of Rhipicephalus haemaphysaloides hemolymph-derived EVs for biological processes, cellular components and molecular functions.
DOI: 10.6084/m9.figshare.26581967.v1
title: Additional file 11 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 11: Table S7. KEGG pathway analysis of proteins identified from Hyalomma asiaticum hemolymph-derived EVs.
DOI: 10.6084/m9.figshare.26581955.v1
title: Additional file 7 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 7: Table S3. Protein content of Hyalomma asiaticum hemolymph-derived EVs identified using the MASCOT search engine
DOI: 10.6084/m9.figshare.26581973
title: Additional file 13 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 13: Table S9. KEGG pathway analysis of proteins identified from Rhipicephalus haemaphysaloides hemolymph.
DOI: 10.6084/m9.figshare.26581979.v1
title: Additional file 15 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 15: Table S11. Host proteins identified in hemolymph EVs.
DOI: 10.6084/m9.figshare.26581961.v1
title: Additional file 9 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 9: Table S5. GO analysis of Hyalomma asiaticum hemolymph-derived EVs for biological processes, cellular components and molecular functions.
DOI: 10.6084/m9.figshare.26581952
title: Additional file 6 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 6: Table S2. Protein content of Rhipicephalus haemaphysaloides hemolymph-derived EVs identified using the MASCOT search engine
DOI: 10.6084/m9.figshare.26581958
title: Additional file 8 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 8: Table S4. GO analysis of Rhipicephalus haemaphysaloides hemolymph-derived EVs for biological processes, cellular components and molecular functions.
DOI: 10.6084/m9.figshare.26581967
title: Additional file 11 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 11: Table S7. KEGG pathway analysis of proteins identified from Hyalomma asiaticum hemolymph-derived EVs.
DOI: 10.6084/m9.figshare.26581970.v1
title: Additional file 12 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 12: Table S8. Protein content of Rhipicephalus haemaphysaloides hemolymph identified using the MASCOT search engine.
DOI: 10.6084/m9.figshare.26581973.v1
title: Additional file 13 of Proteomic analysis of extracellular vesicles from tick hemolymph and uptake of extracellular vesicles by salivary glands and ovary cells

description: Additional file 13: Table S9. KEGG pathway analysis of proteins identified from Rhipicephalus haemaphysaloides hemolymph.
DOI: 10.6084/m9.figshare.26630056
title: Additional file 15 of A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs

description: Additional file 15: Table S1. Age and sex distribution of dogs involved in the study. Table S2. Correlation analysis between bacterial taxa and clinical score (CADESI-04) to select the skin sites for further analysis. Table S3. Statistical summary of the differentially abundant skin bacterial taxa at the phylum level. Table S4. Statistical summary of the differentially abundant skin bacteria at the genus level. Table S5. Correlation of Staphylococcus abundance and CADESI-04 score in each skin site was compared between dog groups. Table S6. Mean relative abundance of the 10 most abundant Staphylococcus spp. in the skin samples form healthy, cADpre, cADpost and cADtreat dogs. Data from 12 skin sites are presented. Percent identity of the best hit from NCBI Nucleotide BLAST is presented in each classified species. Table S7. Data related to Fig. 3. Statistical summary of differentially abundant Staphylococcus spp. between dog groups. Table S8. Mean relative abundance of bacterial taxa at the phylum level in faecal samples from all four dog groups. Table S9. Mean relative abundance of bacterial taxa at the genus level in the faecal samples in all four dog groups. Table S10. Statistical summary of the differentially abundant faecal and skin bacterial taxa between mtDNA haplogroups A and C.
DOI: 10.6084/m9.figshare.26630098
title: Additional file 3 of Network pharmacology-based strategy to investigate the effect and mechanism of α-solanine against glioma

description: Additional file 3. The attribute values of 78 common targets.
DOI: 10.6084/m9.figshare.26630059.v1
title: Additional file 16 of A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs

description: Additional file 16: Supplementary_Material_S1.
DOI: 10.6084/m9.figshare.26630062
title: Additional file 17 of A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs

description: Additional file 17: Supplementary_Material_S2.
DOI: 10.6084/m9.figshare.26630020.v1
title: Additional file 3 of A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs

description: Additional file 3: Figure S3. Beta diversity was analysed by CAPscale analysis of Aichison distances and was compared between four groups: healthy dogs (Healthy), cAD-affected dogs without medical treatment (cADpre), cADpre dogs that received 2 weeks of oclacitinib treatment (cADpost), and cAD-affected dogs already on oclacitinib treatment (cADtreat) in 12 skin sites: abdomen (a), axilla (b), cubital flexor (c), flank (d), front paw (e), hind paw (f), inguinal area (g), medial pinnae (h), palmar metacarpal (i), perilabial area (j), perineum (k) and ventral tail (l).
DOI: 10.6084/m9.figshare.26630062.v1
title: Additional file 17 of A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs

description: Additional file 17: Supplementary_Material_S2.
DOI: 10.15468/dl.and2bj
title: Occurrence Download

description: A dataset containing 96 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.808052 -33.307977, 147.808052 -33.310223, 147.810298 -33.310223, 147.810298 -33.312469, 147.814789 -33.312469, 147.814789 -33.31696, 147.821527 -33.31696, 147.821527 -33.307977, 147.808052 -33.307977))"
 ]
}

 The dataset includes 96 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068684-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26630098.v1
title: Additional file 3 of Network pharmacology-based strategy to investigate the effect and mechanism of α-solanine against glioma

description: Additional file 3. The attribute values of 78 common targets.
DOI: 10.6084/m9.figshare.26630212
title: Additional file 9 of Global diversity and biogeography of DNA viral communities in activated sludge systems

description: Additional file 9: Table S8. Viral auxiliary metabolic genes (AMGs) for carbon, nitrogen, phosphorus, and sulfur metabolism.
DOI: 10.6084/m9.figshare.26630020
title: Additional file 3 of A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs

description: Additional file 3: Figure S3. Beta diversity was analysed by CAPscale analysis of Aichison distances and was compared between four groups: healthy dogs (Healthy), cAD-affected dogs without medical treatment (cADpre), cADpre dogs that received 2 weeks of oclacitinib treatment (cADpost), and cAD-affected dogs already on oclacitinib treatment (cADtreat) in 12 skin sites: abdomen (a), axilla (b), cubital flexor (c), flank (d), front paw (e), hind paw (f), inguinal area (g), medial pinnae (h), palmar metacarpal (i), perilabial area (j), perineum (k) and ventral tail (l).
DOI: 10.6084/m9.figshare.26582006
title: Additional file 1 of Monitoring variability in parameter estimates for lumped parameter models of the systemic circulation using longitudinal hemodynamic measurements

description: Additional file 1. Table S1. Two-tailed t-tests for parameter means using different models and pressure waveforms. Parameter values averaged over different samples of measurements for both model formulations and choices of data sets. Standard deviations are presented in parentheses. The p-value and 95% confidence interval (CI95%) are obtained by a two-tailed t-test for paired data comparing the mean parameter values using the finger and carotid pressure for the same model formulation, or using the same pressure waveform but different model formulations. “Group” indicates which combination of model and pressure waveform is used to generate the data for the group. “CL” indicates the closed-loop model, and “OL” signifies the open-loop model. “-C” indicates the carotid pressure waveform, and “-F” indicates the finger pressure waveform. The parameters included in the analysis are systemic arterial compliance (Cao), total peripheral resistance (Rsys), time of peak elastance in the left ventricle (tpeak), characteristic aortic impedance (Zao), and maximal left-ventricular elastance (Emax).
DOI: 10.6084/m9.figshare.26582006.v1
title: Additional file 1 of Monitoring variability in parameter estimates for lumped parameter models of the systemic circulation using longitudinal hemodynamic measurements

description: Additional file 1. Table S1. Two-tailed t-tests for parameter means using different models and pressure waveforms. Parameter values averaged over different samples of measurements for both model formulations and choices of data sets. Standard deviations are presented in parentheses. The p-value and 95% confidence interval (CI95%) are obtained by a two-tailed t-test for paired data comparing the mean parameter values using the finger and carotid pressure for the same model formulation, or using the same pressure waveform but different model formulations. “Group” indicates which combination of model and pressure waveform is used to generate the data for the group. “CL” indicates the closed-loop model, and “OL” signifies the open-loop model. “-C” indicates the carotid pressure waveform, and “-F” indicates the finger pressure waveform. The parameters included in the analysis are systemic arterial compliance (Cao), total peripheral resistance (Rsys), time of peak elastance in the left ventricle (tpeak), characteristic aortic impedance (Zao), and maximal left-ventricular elastance (Emax).
DOI: 10.15468/dl.nf9xk3
title: Occurrence Download

description: A dataset containing 33767 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Bumblebees and butterflies in Norway"
 ]
}

 The dataset includes 33767 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068685-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6qn7ht
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ukraine",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Stylodipus telum (Lichtenstein, 1823)"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008793-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14622451
title: Implicit dual time-stepping positivity-preserving entropy-stable schemes for the compressible Navier-Stokes equations

description: The database used in the submission of "Implicit dual time-stepping positivity-preserving entropy-stable schemes for the compressible Navier-Stokes equations."

ABSTRACT

We generalize the explicit high-order positivity-preserving entropy-stable spectral collocation schemes developed in recent works by Upperman and Yamaleev (2023) for the three-dimensional (3D) compressible Navier Stokes equations to a time implicit formulation. The time derivative terms are discretized by using the first- and second-order implicit backward difference formulas (BDF1 and BDF2) that are well suited for solving steady-state and time-dependent viscous flows at high Reynolds numbers, respectively. The nonlinear system of discrete equations at each physical timestep is solved by using a dual time-stepping technique. The proposed scheme is provably entropy-stable and positivity-preserving and provides unconditional stability properties in the physical time. Numerical results demonstrating accuracy and positivity-preserving properties of the new dual time-stepping scheme are presented for supersonic viscous flows with strong shock waves and contact discontinuities.