cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.14272/alwwybovtkjsmv-uhfffaoysa-n/chmo0000630
title: infrared absorption spectroscopy (IR) (2-ethyl-3-phenylquinoxaline)
title: InChI=1S/C16H14N2/c1-2-13-16(12-8-4-3-5-9-12)18-15-11-7-6-10-14(15)17-13/h3-11H,2H2,1H3

description: dataset for infrared absorption spectroscopy (IR) IR (ATR, ṽ) = 3064, 3033, 2972, 2932, 2908, 2868, 2200, 2167, 2099, 2043, 1983, 1948, 1560, 1483, 1463, 1443, 1402, 1351, 1334, 1299, 1218, 1183, 1135, 1075, 1018, 1007, 962, 915, 819, 790, 762, 738, 694, 674, 611, 578, 554, 534, 475, 422, 385 cm–1.
DOI: 10.15468/pyn7bj
title: Description of Pseudosteineria longisetis sp. n. from northeastern Brazil with a review of the genus Pseudosteineria Wieser, 1956 (Nematoda: Xyalidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Cidreira, Gabriel, Venekey, Virág, De Souza Alves, Orane F., Kelmo, Francisco (2020): Description of Pseudosteineria longisetis sp. n. from northeastern Brazil with a review of the genus Pseudosteineria Wieser, 1956 (Nematoda: Xyalidae). Zootaxa 4763 (3): 354-370, DOI: 10.11646/zootaxa.4763.3.2
DOI: 10.18453/rosdok_id00002648
title: Partial evaluation via code generation for static stochastic reaction network models (Software Appendix)

description: Succinct, declarative, and domain-specific modeling languages have many advantages when creating simulation models. However, it is often challenging to efficiently execute models defined in such languages. We use code generation for model-specific simulators. Code generation has been successfully applied for high-performance algorithms in many application domains. By generating tailored simulators for specific simulation models defined in a domain specific language, we get the best of both worlds: a succinct, declarative and formal presentation of the model and an efficient execution. We illustrate this based on a simple domain-specific language for biochemical reaction networks as well as on the network representation of the established BioNetGen language. We implement two approaches adopting the same simulation algorithms: one generic simulator that parses models at runtime and one generator that produces a simulator specialized to a given model based on partial evaluation and code generation. Akin to profile-guided optimization we also use dynamic execution of the model to further optimize the simulators. The performance of the approaches is carefully benchmarked using representative models of small to mid-sized biochemical reaction networks. The generic simulator achieves a performance similar to state of the art simulators in the domain, whereas the specialized simulator outperforms established simulation algorithms with a speedup of more than an order of magnitude. This repository contains the code generation software as described in the 2020 PADS paper Partial evaluation via code generation for static stochastic reaction network models.
DOI: 10.3886/e119044
title: social capital and performance

description: Community supported agriculture (CSA) models have attracted the increasing attention of people around the world who seek food security, agroecology and solidarity. This study aims to assess the performance of community supported agriculture groups in Turkey through the social capital accumulated within their communities. To this end, a mix of exploratory and explanatory approaches was used. Findings of this study provide a comprehensive look at structure and dynamics of CSAs in Turkey as well as the relationship between their social capital and performance. <br>
DOI: 10.3886/e119044v1
title: social capital and performance

description: Community supported agriculture (CSA) models have attracted the increasing attention of people around the world who seek food security, agroecology and solidarity. This study aims to assess the performance of community supported agriculture groups in Turkey through the social capital accumulated within their communities. To this end, a mix of exploratory and explanatory approaches was used. Findings of this study provide a comprehensive look at structure and dynamics of CSAs in Turkey as well as the relationship between their social capital and performance. <br>
DOI: 10.5281/zenodo.3759349
title: Block scanning strain measurement in Transmission electron microscope

description: This data set and the processing script is part of the publication "Smart HAADF-STEM scanning strategy for local measurement of strain at the nanoscale". The data set contains the 64x64 and 32x32 pixel subimage scanning along with the Bessel diffraction data. It is a comparison of the new scanning strategy called the "Block scanning" with that of the Bessel diffraction technique. The experiments were performed with the FEI Titan microscope operating at 300 kV high tension.The python script allows the extraction of the strain from the block scanning technique. The Bessel diffraction processing software can be found in the link: https://bitbucket.org/lutosensis/tem-thesis/src/master/
DOI: 10.5281/zenodo.3759350
title: Block scanning strain measurement in Transmission electron microscope

description: This data set and the processing script is part of the publication "Smart HAADF-STEM scanning strategy for local measurement of strain at the nanoscale". The data set contains the 64x64 and 32x32 pixel subimage scanning along with the Bessel diffraction data. It is a comparison of the new scanning strategy called the "Block scanning" with that of the Bessel diffraction technique. The experiments were performed with the FEI Titan microscope operating at 300 kV high tension.The python script allows the extraction of the strain from the block scanning technique. The Bessel diffraction processing software can be found in the link: https://bitbucket.org/lutosensis/tem-thesis/src/master/
DOI: 10.18434/m32223
title: Atom-Based Device Navigator (ABDNavigator)

description: ABDNavigator is software written for scanning probe (e.g. scanning tunneling microscope) control and sample navigation of atom-based devices. Here atom-based devices refer to devices whose components span from the micron scale range down to sub nanometer and are probed, and typically fabricated by scanning tunneling microscope.
DOI: 10.5281/zenodo.3758651
title: A K-means Clustering Analysis of the Jovian and Terrestrial Magnetopauses

description: Jovian magnetopause crossings used in the referenced paper
DOI: 10.15468/fmepae
title: Discovery of Viridotheres Manning, 1996 in the southwestern Pacific and first record of Discorsotheres camposi Ahyong, 2018 from New Caledonia (Crustacea: Brachyura: Pinnotheridae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ahyong, Shane T. (2020): Discovery of Viridotheres Manning, 1996 in the southwestern Pacific and first record of Discorsotheres camposi Ahyong, 2018 from New Caledonia (Crustacea: Brachyura: Pinnotheridae). Zootaxa 4763 (3): 429-434, DOI: 10.11646/zootaxa.4763.3.7
DOI: 10.5523/bris.3mw2y33y7a1j32v3r7r77t953z
title: Confounder investigation

description: This project contains data on dogs trained to detect prostrate cancer, when challenged with a variety of potential confounding factors.
DOI: 10.15468/r27dtd
title: Discovery of a new Nearctic species of Bocchus (Hymenoptera: Dryinidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Guglielmino, Adalgisa, Olmi, Massimo, Capradossi, Leonardo, Speranza, Stefano (2020): Discovery of a new Nearctic species of Bocchus (Hymenoptera: Dryinidae). Zootaxa 4763 (3): 435-438, DOI: 10.11646/zootaxa.4763.3.8
DOI: 10.15468/uqpwfr
title: A new species of the montane lacewing genus Rapisma McLachlan (Neuroptera, Ithonidae) from northwestern Yunnan, China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Liu, Xingyue (2020): A new species of the montane lacewing genus Rapisma McLachlan (Neuroptera, Ithonidae) from northwestern Yunnan, China. Zootaxa 4763 (3): 439-443, DOI: 10.11646/zootaxa.4763.3.9
DOI: 10.21227/ejsz-pw04
title: Proteome data of tumor-derived extracellular vesicles

description: Proteome analysis of extracellular vesicles, isolated from murine breast cancer cells or serum of healthy mice.
DOI: 10.21227/jjt9-6707
title: Proteome data of tumor-derived extracellular vesicles

description: Proteome analysis of extracellular vesicles, isolated from murine breast cancer cells or serum of healthy mice.
DOI: 10.25346/s6/zjkuac/em6dsn
title: zoom_test.mp4

description: Test zoom file
DOI: 10.5281/zenodo.3758729
title: SARS-CoV-2 vs. Homo sapiens BLASTP protein sequence analysis results

description: SARS-CoV-2 vs. Homo sapiens BLASTP protein sequence analysis results
DOI: 10.5281/zenodo.3758730
title: SARS-CoV-2 vs. Homo sapiens BLASTP protein sequence analysis results

description: SARS-CoV-2 vs. Homo sapiens BLASTP protein sequence analysis results
DOI: 10.5281/zenodo.3759095
title: MAC Dataset

description: This dataset consist prediction of many models of the RSNA Intracranial Hemorrhage Detection Kaggle challenge. These predictions are used as a test case for the MAC framework. There are two files:<br> train.tar.gz: prediction of 310 models on the stage 2 training dataset of the challenge. <br> test.tar.gz: prediction of 460 models on the stage 2 test dataset of the challenge. The labels of the train dataset are located on the Kaggle challenge page.
DOI: 10.25592/uhhfdm.904
title: Cladistics 19, 23-89 matrix

description: Data set of the referenced publication Haas, A. (2003) Phylogeny of frogs as inferred from primarily larval characters (Amphibia: Anura). <em>Cladistics</em> 19, 23–89.
description: Character matrix for the original publication in Cladistics 19, 23-89
description: {"references": ["Haas, A. (2003) Phylogeny of frogs as inferred from primarily larval characters (Amphibia: Anura). Cladistics 19, 23\u201389."]}
DOI: 10.7479/enkp-cb58
title: Supplementary material to a paper on Chytrid Pathogen (Batrachochytrium dendrobatidis) in African Amphibians: A Continental Analysis of Occurrences and Modeling of its Potential Distribution

description: This data set comprehends supplemental material to the paper published by Zimkus et al (2020) in Herpetologica (add DOI). It includes supplemental material and methods as well as the supplemental files S1 to S13 referenced in the article.
DOI: 10.6084/m9.figshare.12160239.v1
title: Additional file 1 of DeSignate: detecting signature characters in gene sequence alignments for taxon diagnoses

description: Additional file 1 XLSX file containing summarized and detailed results of the comparison between QUIDDICH and DeSignate.
DOI: 10.25592/uhhfdm.903
title: Cladistics 19, 23-89 matrix

description: Data set of the referenced publication Haas, A. (2003) Phylogeny of frogs as inferred from primarily larval characters (Amphibia: Anura). <em>Cladistics</em> 19, 23–89.
description: Character matrix for the original publication in Cladistics 19, 23-89
description: {"references": ["Haas, A. (2003) Phylogeny of frogs as inferred from primarily larval characters (Amphibia: Anura). Cladistics 19, 23\u201389."]}
DOI: 10.6084/m9.figshare.12160239
title: Additional file 1 of DeSignate: detecting signature characters in gene sequence alignments for taxon diagnoses

description: Additional file 1 XLSX file containing summarized and detailed results of the comparison between QUIDDICH and DeSignate.
DOI: 10.5281/zenodo.3759113
title: Asia.bib: A bibtex bibliography for Asian Historical Linguistics

description: This is the working version of the bibliography used in those aspects of the ERC synergy project 'Beyond Boundaries: Religion, Region, Language and the State' (ID: ID: 609823), which are based at SOAS University of London. It covers many works in Sino-Tibetan linguistics, particularly Tibetan and the Burmish languages, but also has many works on the history of linguistics, historical linguistics methodology, and computational approaches to historical linguistics.
DOI: 10.5281/zenodo.3759114
title: Asia.bib: A bibtex bibliography for Asian Historical Linguistics

description: This is the working version of the bibliography used in those aspects of the ERC synergy project 'Beyond Boundaries: Religion, Region, Language and the State' (ID: ID: 609823), which are based at SOAS University of London. It covers many works in Sino-Tibetan linguistics, particularly Tibetan and the Burmish languages, but also has many works on the history of linguistics, historical linguistics methodology, and computational approaches to historical linguistics.
DOI: 10.18434/m32218
title: SHREC'14 Track: Extended Large Scale Sketch-Based 3D Shape Retrieval

description: The objective of SHREC'14 Track is to evaluate the performances of different sketch-based 3D model retrieval algorithms using a large scale hand-drawn sketch query dataset on a generic 3D model dataset. Sketch-based 3D model retrieval is to retrieve relevant 3D models using sketch(es) as input. This scheme is intuitive and convenient for users to learn and search for 3D models. It is also popular and important for related applications such as sketch-based modeling and recognition, as well as 3D animation production via 3D reconstruction of a scene of 2D storyboard. However, most existing 3D model retrieval algorithms target the Query-by-Model framework which uses existing 3D models as queries. Much less research work has been done regarding the Query-by-Sketch framework. Large scale sketch-based 3D shape retrieval has received more and more attentions in the community of content-based 3D object retrieval. The objective of this track is to evaluate the performance of different sketch-based 3D model retrieval algorithms using a large scale hand-drawn sketch query dataset on a comprehensive 3D model dataset. The benchmark contains 12,680 sketches and 8,987 3D models, divided into 171 distinct classes. In this track, 12 runs were submitted by 4 groups and their retrieval performance was evaluated using 7 commonly used retrieval performance metrics. We hope that this benchmark, the comparative evaluation results and the corresponding evaluation code will further promote the progress of this research direction for the 3D model retrieval community. Evaluation Method: The performance is evaluated by Precision-Recall (PR) graph, Nearest Neighbor (NN), First Tier (FT), Second Tier (ST), E-Measures (E), Discounted Cumulated Gain (DCG) and Average Precision (AP) Please cite the papers: [1] Bo Li, Yijuan Lu, Chunyuan Li, Afzal Godil, Tobias Schreck, Masaki Aono, Martin Burtscher, Qiang Chen, Nihad Karim Chowdhury, Bin Fang, Hongbo Fu, Takahiko Furuya, Haisheng Li, Jianzhuang Liu, Henry Johan, Ryuichi Kosaka, Hitoshi Koyanagi, Ryutarou Ohbuchi, Atsushi Tatsuma, Yajuan Wan, Chaoli Zhang, Changqing Zou. A Comparison of 3D Shape Retrieval Methods Based on a Large-scale Benchmark Supporting Multimodal Queries. Computer Vision and Image Understanding, November 4, 2014. [2] Bo Li, Yijuan Lu, Chunyuan Li, Afzal Godil, Tobias Schreck, Masaki Aono, Martin Burtscher, Hongbo Fu, Takahiko Furuya, Henry Johan, Jianzhuang Liu, Ryutarou Ohbuchi, Atsushi Tatsuma, Changqing Zou. SHREC' 14 Track: Extended Large Scale Sketch-Based 3D Shape Retrieval. Eurographics Workshop on 3D Object Retrieval 2014 (3DOR 2014): 121-130, 2014.
DOI: 10.17632/s27f4dpm96.3
title: Open Access and non-Open Access Springer Books dataset in different disciplines (2010-2019)

description: The data is related to our manuscript entitled "Is the relationship between academic and social impact of the open access and non-open access books the same? Impact Evaluation on Open Access Books Considering Citation Behaviors and Social Media Attention" submitted in the Journal and it is included Springer open access and non-open access books from January 1, 2010 to June 30, 2019.
DOI: 10.17632/w4y68mvh65.1
title: Responses of Survey study on E-Learning platforms during pandemic lockdown

description: Study of awareness, effectiveness and perceived satisfaction in students of Indian higher education institutions of engineering and architecture during COVID-19 Pandemic
DOI: 10.25919/5e9eabdf98b0b
title: Parkes observations for project P885 semester 2020APRS_01

description: We propose to observe the magnetars 1E 1547.0-5408 and PSR J1622-4950 approximately weekly, to track their rotation, flux density, and polarisation, as we have long been doing through this project. The revolutionary UWL capabilities promise new opportunities to disentangle still mysterious radio emission mechanisms in magnetars. This promise is supported by the recent follow up of XTE J1810-197, again a radio magnetar after 10 years dormant, for which our observations with the UWL receiver are providing unique and tantalizing measurements of its radio spectrum and polarisation.
DOI: 10.5281/zenodo.3759602
title: Coronavirus Open Citations Dataset

description: The Coronavirus Open Citations Dataset curated by OpenCitations currently contains (as of 20 April 2020) information about 124,295 citations and about the 42,213 citing or cited articles involved in these citations. A subset of these data (stored in the "_partial.json" files introduced below) is used for creating the visualization available at https://opencitations.github.io/coronavirus/. Each item in both the JSON files storing citations ('citations_full.json' and 'citations_partial.json') contains the following fields: "id", a numeric identifier of the citation; "source", the citing entity; "target", the cited entity. Each item in both the JSON files storing article metadata ('metadata_full.json' and 'metadata_partial.json') contains the following fields: "id", the DOI of the article; "author", the surname of all the authors of the article; "year", the year of publication; "title", the title of the article; "source_title", the title of the venue where the article has been published. In addition, any item in the file 'metadata_partial.json' contains another field: "count": the overall number of citations that the article received.
description: This version fixes a missing article title in the partial data used for visualization purposes.
DOI: 10.5281/zenodo.3759823
title: Cenote-Taker2 HMM Databases

description: HMMER-formatted database of viral genes for Cenote-Taker2
DOI: 10.18434/m32213
title: SHREC'10 Track: Generic 3D Warehouse

description: The objective of this track is to evaluate the performance of 3D shape retrieval approaches on a Generic 3D shape benchmark based on the Google 3D Warehouse.Introduction: With the increasing number of 3D models are created everyday and stored in databases. Effectively searching a 3D repository for 3D shapes which are similar to a given 3D query model has become an important area of research. Benchmarking allows researchers to evaluate the quality of results of different 3D shape retrieval approaches. Here, we propose a new publicly available 3D shape benchmark based on the Google 3D Warehouse to advance the state of art in 3D shape retrievalTask description: The task is to evaluate the dissimilarity between every two objects in the database mentioned above and then output the dissimilarity matrix.Data set: All the 3D models in the generic shape benchmark were acquired by a web crawler from the Google 3D Warehouse. To classify the 3D shape models into a ground truth database, one person based on the Google tags has classified objects into ground truth categories based mainly on visual similarity. In this benchmark, there will be over three thousand 3D models. The file format used to represent the 3D models will be the ASCII Object File Format (*.off).Evaluation Methodology: We will employ the following evaluation measures: Precision-Recall curve; Average Precision (AP) and Mean Average Precision (MAP); E-Measure; Discounted Cumulative Gain; Nearest Neighbor, First-Tier (Tier1) and Second-Tier (Tier2).Please Cite the Paper: SHREC'10 Track: Generic 3D Warehouse., T.P. Vanamali, A. Godil, H. Dutagaci,T. Furuya, Z. Lian, R. Ohbuchi, In: M. Daoudi, T. Schreck, M. Spagnuolo, I. Pratikakis, R. Veltkamp (eds.), Proceedings of the Eurographics/ACM SIGGRAPH Symposium on 3D Object Retrieval, 2010.
DOI: 10.18434/m32166
title: SEDCORR: An Algorithm for Correcting Systematic Energy Deficits in the Atom Probe Mass Spectra

description: SEDCORR is an open-source Python module designed to correct for the systematic energy deficits in atom probe mass spectra of electrically insulating samples. The assumption of the algorithm is that the mass spectrum for a dataset is conserved throughout the dataset and that any changes to the peak positions arise from an unknown slowly-fluctuating accelerating voltage. For computational speed, the unknown accelerating voltage is determined using a template matching FFT-based cross correlation method. The Python source code and an example dataset is available on the home page: https://github.com/usnistgov/SEDcorr
DOI: 10.18119/n9w891
title: Extended network ESRRA
DOI: 10.25919/5e9f162899f6e
title: Parkes observations for project P1039 semester 2020APRS_01

description: Rotating Radio Transients (RRATs) are a group of sporadically emitting neutron stars. Their erratic single-pulse emission makes them hard to detect and consequently, our knowledge of even the basic parameters of the population is lacking. Here we propose an ambitious project to systematically review the spectral and rotational parameters of a large fraction (29) of the known RRAT population in the southern hemisphere, roughly 90 per cent of those that are well localised. Our project plays to the strengths of the newly commissioned Parkes UWL receiver and backend system, its wide 3.3-GHz instantaneous frequency coverage, excellent sensitivity and ability to coherently remove the effects of dispersion in the interstellar medium. The data will enable us to measure their absolute calibrated flux densities, polarimetric profiles, spectral behaviour, detection rates, inter-pulse waiting times and rotational parameters. Our measurements are crucial to understanding whether the RRATs form a distinct class from the ordinary radio pulsars and will inform observations and RRAT yields of surveys at upcoming facilities. Additionally, they will elucidate any potential relationship with pulses from repeating Fast Radio Bursts.