cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15225340
title: Supplementary datasets for Tasdighian S *, Sensalari C * and Maere S (2025) Using reciprocally retained gene families to detect whole-genome multiplications in plants.

description: This archive contains input and output files for the computational analyses performed in the manuscript : Tasdighian S *, Sensalari C * and Maere S (2025) Using reciprocally retained gene families to detect whole-genome multiplications in plants.
DOI: 10.6084/m9.figshare.28811573
title: Physical Performance Data Tigres UANL. 2024

description: Analysis of external load obtained through the WIMU Pro system in Liga MX players from Tigres UANL, Mexico's first division, during the 2021–2023 seasons. (Postdoctoral project on football performance)"
DOI: 10.15468/dl.3n6j2s
title: Occurrence Download

description: A dataset containing 5207 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Plethodon richmondi Netting & Mittleman, 1938)"
 ]
}

 The dataset includes 5207 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003630-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p9lvy7gv
title: Whole-rock and glass chemistry of lava samples collected during the 2018 Lower East Rift Zone eruption of Kilauea

description: This data release contains selected results of whole-rock and glass analyses of lava samples collected during the 2018 eruption of Kilauea's lower East Rift Zone (LERZ). Included are sampling-site information, eruptive vent/fissure, and sampling descriptions. During the 2018 LERZ eruption, the chemical analysis of lava samples was performed within hours of collection using an energy-dispersive X-ray fluorescence (ED-XRF) pressed-pellet methodology. The accuracy of this method was evaluated by analyzing a subset of samples using the more widely accepted wavelength dispersive X-ray fluorescence (WD-XRF) fused-bead methodology. WD-XRF analyses were performed both during and after the eruption at the Hamilton Analytical Lab, Hamilton College, New York. Results from both ED-XRF and WD-XRF, as well as summary statistics on reference-material runs, are presented here for selected major and trace-element data. The glass component of lava samples was analyzed separately using Electron Probe Microanalysis (EPMA). The results of EPMA analysis of samples, as well as summary statistics on EPMA glass-reference-material runs are presented for selected major and trace-element data. Also included in this release are the analytical results from whole-rock and glass samples which are representative of magmatic end members, or eruptive vent sites, on Kilauea volcano. This includes, a spatter sample collected from the &amp;amp;quot;last gasp&amp;amp;quot; of the Puu Oo eruption during the collapse of that vent on May 1, 2018 preceding the LERZ eruption, select samples from the Puu Oo vent preceeding the eruption, samples from the Overlook vent at Halema'uma'u at the summit of Kilauea, and finally a dacite-lava sample collected from a drilling well in the LERZ which may represent a mixing end-member of the LERZ 2018 eruption.
DOI: 10.5066/f70r9nmj
title: Mississippi Alluvial Plain Extent, November 2017

description: The Mississippi Alluvial Plain (MAP) has become one of the most important agricultural regions in the US, and it relies heavily on a groundwater system that is poorly understood and shows signs of substantial change. The heavy use of the available groundwater resources has resulted in significant groundwater-level declines and reductions in base flow in streams within the MAP. These impacts are limiting well production and threatening future water-availability for the region. This product will help not only scientists in our center, but also at a national level. This product will also be part of a larger study encompassing the Mississippi Alluvial Plain region. The Mississippi Alluvial Plain extent was delineated using GIS tools to represent the geographic extent of the Mississippi Alluvial Aquifer through incorporation of elevation information, geomorphology knowledge, ecological region extent, and previously published extents for part of the MAP region. The current MAP extent represents version 1.0. Future changes to the MAP extent will be tracked through increasing version numbers.
DOI: 10.15468/dl.xes8cy
title: Occurrence Download

description: A dataset containing 37430 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gobiosoma bosc (Lacepède, 1800)"
 ]
}

 The dataset includes 37430 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073616-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57837/cnr-imaa/ares/actris-earlinet/2024/sof/particle_depolarization_ratio_355
title: ACTRIS-EARLINET 2024 particle depolarization ratio profiles at 355nm over SOF Sofia - Bulgaria

description: ACTRIS-EARLINET 2024 particle depolarization ratio profiles at 355nm over SOF Sofia - Bulgaria.
This dataset collects all the particle depolarization ratio profiles at 355nm collected in 2024 at the aerosol remote sensing SOF station (Sofia - Bulgaria). Related files also contain volume depolarization ratio profiles at the same wavelength.  This dataset is incremental: data collected in 2024 are added as soon as a new observation is collected in 2024 and added to the ACTRIS/EARLINET database.
DOI: 10.57837/cnr-imaa/ares/actris-earlinet/2024/sof/particle_depolarization_ratio_532
title: ACTRIS-EARLINET 2024 particle depolarization ratio profiles at 532nm over SOF Sofia - Bulgaria

description: ACTRIS-EARLINET 2024 particle depolarization ratio profiles at 532nm over SOF Sofia - Bulgaria.
This dataset collects all the particle depolarization ratio profiles at 532nm collected in 2024 at the aerosol remote sensing SOF station (Sofia - Bulgaria). Related files also contain volume depolarization ratio profiles at the same wavelength.  This dataset is incremental: data collected in 2024 are added as soon as a new observation is collected in 2024 and added to the ACTRIS/EARLINET database.
DOI: 10.15468/dl.pjtxrr
title: Occurrence Download

description: A dataset containing 130 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gobiosoma bosci (Lacepède, 1800)"
 ]
}

 The dataset includes 130 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073617-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9hhuna
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "StateProvince is one of (SIchuan, SiChuan, Sichuan, Sichuan (Prov.), Sichuan (Setchuan), Sichuan (Szechuan), Sichuan (Szechwan), Sichuan (四川), Sichuan (四川) Province, Sichuan (四川) province)",
 "TaxonKey is one of (Moschus chrysogaster (Hodgson, 1839), Moschus chrysogaster chrysogaster, Moschus chrysogaster sifanicus Büchner, 1891, Moschus chrysogaster leucogaster Hodgson, 1839)"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073618-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14676365
title: Dataset - Wu and Tian

description: INDEPTH_PnRF_greaterThan4.5.rar composes of the PnRFs of magnitude greater than 4.5 from the INDEPTH III broadband seismic stations

INDEPTH_PnRF_4-4.5.rar composes of the deep learning selected PnRFs of magnitude 4 to 4.5 from the INDEPTH III broadband seismic stations

INDEPTH_PRF.rar composes of the tele-RFs of  the INDEPTH III broadband seismic stations

All files are SAC binary format.
DOI: 10.5281/zenodo.14676366
title: Dataset - Wu and Tian

description: INDEPTH_PnRF_greaterThan4.5.rar composes of the PnRFs of magnitude greater than 4.5 from the INDEPTH III broadband seismic stations

INDEPTH_PnRF_4-4.5.rar composes of the deep learning selected PnRFs of magnitude 4 to 4.5 from the INDEPTH III broadband seismic stations

INDEPTH_PRF.rar composes of the tele-RFs of  the INDEPTH III broadband seismic stations

All files are SAC binary format.
DOI: 10.5281/zenodo.14676754
title: Dataset - Wu and Tian

description: INDEPTH_PnRF_greaterThan4.5.rar composes of the PnRFs of magnitude greater than 4.5 from the INDEPTH III broadband seismic stations

INDEPTH_PnRF_4-4.5.rar composes of the deep learning selected PnRFs of magnitude 4 to 4.5 from the INDEPTH III broadband seismic stations

INDEPTH_PRF.rar composes of the tele-RFs of  the INDEPTH III broadband seismic stations

All files are SAC binary format.
DOI: 10.15468/dl.bbe9gn
title: Occurrence Download

description: A dataset containing 2091 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gobius xanthocephalus Heymer & Zander, 1992"
 ]
}

 The dataset includes 2091 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073619-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hfh586
title: Occurrence Download

description: A dataset containing 772 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Freshwater Lamprey Survey Data"
 ]
}

 The dataset includes 772 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073620-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a7dcx8
title: Occurrence Download

description: A dataset containing 21914 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gramma loreto Poey, 1868"
 ]
}

 The dataset includes 21914 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073621-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14676824
title: Letter to clay university

description: This is our letter to Clay university showing the advancements we have made in the Riemann Hypothesis
DOI: 10.5281/zenodo.14676825
title: Letter to clay university

description: This is our letter to Clay university showing the advancements we have made in the Riemann Hypothesis
DOI: 10.5281/zenodo.14676838
title: Laser scanned pipes
DOI: 10.5281/zenodo.14676839
title: Laser scanned pipes
DOI: 10.15468/dl.pkz3dq
title: Occurrence Download

description: A dataset containing 6616 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bombax ceiba L."
 ]
}

 The dataset includes 6616 records from 169 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073622-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14457/tu.the.2024.31
title: แผ่นเส้นใยอิเล็กโตรสปัน พอลิไวนิลแอลกอฮอล์ / ไคโตซาน / คอลลาเจน ที่บรรจุอิริโทรมัยซินเพื่อใช้ทำแผ่นปิดแผลต้านเชื้อแบคทีเรีย

description: งานวิจัยนี้ขึ้นรูปแผ่นเส้นใยอิเล็กโตรสปันจากสารละลายพอลิเมอร์ผสมพอลิไวนิลแอลกอฮอล์ (PVA) ไคโตซาน (CS) และคอลลาเจน (CG) ที่อัตราส่วนแตกต่างกัน ได้แก่ PVA/CS/CG 6/3/1, 6/1/3, 7/2/1 และ 7/1/2 โดยบรรจุอิริโทรมัยซิน (EM) ลงไปในสารละลายพอลิเมอร์ผสม 0.1% โดยน้ำหนัก (PVA/CS/CG–EM) เพื่อใช้งานด้านแผ่นปิดแผล ศึกษาขนาดและสัณฐานของเส้นใยด้วยกล้องจุลทรรศน์อิเล็กตรอนแบบส่องกราด (SEM) พบว่าขนาดเส้นผ่านศูนย์กลางของเส้นใยเฉลี่ยอยู่ในช่วง 157-218 นาโนเมตร โดยเส้นใยที่อัตราส่วน 7/2/1 และ 7/1/2 มีลักษณะเรียบ สม่ำเสมอ ไม่มีเม็ดปม ในขณะที่อัตราส่วน 6/3/1 และ 6/1/3 มีเม็ดปมเกิดขึ้นเล็กน้อย และพบว่าอัตราส่วนของสารละลายพอลิเมอร์มีผลต่อขนาดเส้นผ่านศูนย์กลางของเส้นใย เนื่องจากมีค่าความหนืด ความนำไฟฟ้า และแรงตึงผิวของสารละลายต่างกัน จากนั้นทำการเชื่อมขวางแผ่นเส้นใยด้วยไอระเหยกลูตาราลดีไฮด์ (GTA) เส้นใยหลังการเชื่อมขวางมีขนาดเส้นผ่านศูนย์กลางเฉลี่ยใหญ่ขึ้นอยู่ในช่วง 182-228 นาโนเมตร เมื่อทดสอบองค์ประกอบทางเคมีด้วยเทคนิคฟูเรียร์ทรานส์ฟอร์มอินฟราเรดสเปคโตรสโคปี (FT-IR) พบว่าไม่มีไอระเหยของ GTA หลงเหลืออยู่ และเทคนิคโปรตอนนิวเคลียร์แมกเนติกเรโซแนนซ์สเปคโตรสโคปี (1H-NMR) พบว่า EM ที่บรรจุในแผ่นเส้นใยไม่เสียสภาพทางเคมีจากการกระบวนการขึ้นรูปเส้นใยซึ่งใช้ศักย์ไฟฟ้าแรงสูง เมื่อทดสอบสมบัติความชอบน้ำ การบวมตัวและน้ำหนักที่สูญเสีย พบว่าเมื่ออัตราส่วนคอลลาเจนเพิ่มขึ้น แผ่นเส้นใยมีความชอบน้ำมากขึ้น ส่งผลให้มีระดับการบวมน้ำและน้ำหนักที่สูญเสียเพิ่มมากขึ้น จากนั้นทดสอบสมบัติเชิงกลพบว่าแผ่นเส้นใยมีความแข็งแรงเพียงพอที่จะนำไปทำแผ่นปิดแผลได้ ลักษณะการปลดปล่อยของ EM จากแผ่นเส้นใย PVA/CS/CG–EM จากวิธีการแพร่โดยใช้ Franz diffusion cell ในสารละลายฟอสเฟตบัฟเฟอร์ (pH 7.4) พบว่าในตอนเริ่มต้นเกิดการปลดปล่อยอย่างรวดเร็วจนเข้าสู่สภาวะคงที่ ปริมาณ EM ที่ปลดปล่อยสะสมในช่วงเวลา 0–2880 นาที มีค่าสูงสุดอยู่ในช่วง 51.6-73.1% ประสิทธิภาพการต้านอนุมูลอิสระมีค่าสูงสุดอยู่ในช่วง 65-70% นอกจากนี้แผ่นเส้นใยอิเล็กโตรสปันยังสามารถยับยั้งเชื้อแบคทีเรียได้ทั้ง Staphylococcus aureus (S. aureus) และ Escherichia coli (E. coli) กล่าวได้ว่าแผ่นเส้นใย PVA/CS/CG–EM มีคุณสมบัติเหมาะสมที่จะนำไปประยุกต์ใช้ทำแผ่นปิดแผล
DOI: 10.14457/tu.the.2018.1700
title: New insight into rhodomyrtone’s antibacterial mechanism reveals disturbance of nucleoid segregation with septum misplacement in Streptococcus suis

description: Rhodomyrtone has been recently demonstrated to possess a novel antibiotic mechanism of action involving multiple targets resulting in interference of several bacterial biological processes including bacterial cell division. The present study aims to further elucidate the effect of rhodomyrtone on Streptococcus suis nucleoid segregation. S. suis, an important zoonotic pathogen. MIC and MBC values of rhodomyrtone against recombinant Streptococcus suis ParB-GFP, nucleoid segregation reporter strain, were 0.5 and 1 µg/ml, equivalent to the potency of vancomycin antibiotics Using live-cell imaging fluorescence, we demonstrated that the compound (2 x MIC) caused incomplete nucleoid segregation and septum misplacement. Subsequently, it led to the generation of anucleated cells. FtsZ immune-staining of rhodomyrtone (2 x MIC) treated S. suis for 30 minutes revealed that, although, large amount of FtsZ was trapped in the region of high fluidity membrane, it was able to polymerize to form the complete Z-ring. However, the Z-ring was shift away from midcell. Transmission electron micrograph further confirmed the presence of a disturbance on S. suis nucleoid segregation and septum misplacement following 120 minutes of 2 x MIC rhodomyrtone treatment. The asymmetric septum formation resulted in either generation of minicell without nucleoid or septum form over incomplete segregated nucleoid (guillotine effect) as well as formation of multi-constriction of Z-ring within a single cell. Moreover, apparent cell morphology alteration and cell lysis were found. This finding demonstrated that the disturbance of the bacterial nucleoid segregation checkpoint was part of early antibacterial mechanism of rhodomyrtone. However, more profound functional consequence on nucleoid segregation defect following rhodomyrtone treatment yet remains to be elucidated.
DOI: 10.14457/tu.the.2019.1667
title: Development of monoclonal antibody for Diego blood group typing

description: Antibodies against the Diego (DI) blood group antigens, anti-Dia and anti-Dib are implicated in mild to severe hemolytic disease of the fetus and newborn and hemolytic transfusion reactions. Owing to the high prevalence of the Dia antigen in Asian populations, including this antigen in the reagent red cells is relevant. To date, polyclonal human anti-Dia is routinely used in blood bank laboratories. Because of its high cost and short supply, the production of monoclonal antibodies is suggested. This study aimed to produce monoclonal antibodies for Diego blood group antigen typing using antibody phage display technology. A library of phages displaying mouse single-chain variable fragment antibody (scFv-phages) was incubated with panels of Di(a−b+) red blood cells (RBCs) containing other clinical important blood group antigens to eliminate unwanted binders. Thereafter, the scFv-phages specific to the Dia antigen were selectively fished out from the subtractive library by Di(a+b+) RBC ghosts and Di(a+b−) RBCs. Specific binding of the selected scFv-phages was validated with the Dia peptide by hemagglutination inhibition (HI) assay and confirmed testing with Di(a+b+) and Di(a−b+) RBCs by flow cytometry. The M13 wild-type phage served as a negative control. The selected scFv-phages were checked and analyzed to determine phage peptide sequence and immunoglobulin domains were predicted using DNA sequencing and IMGT visualization, respectively. Following the screening process, five scFv-phage clones were primarily chosen to test binding activity with the Dia epitope using reverse competitive inhibition test. Three scFv-phage clones showed positive binding activity; however only an scFv-phage clone no. 4 had complete VH and VL domains contributing antigen-binding ability. Predicting their immunoglobulin domains was closely related to the Mus musculus immunoglobulin sequence. Concerning flow cytometry analysis, the percentages of scFv-phage clone no. 4 reacting with Di(a+b+) RBCs were significantly higher than with Di(a−b+) RBCs. On the contrary, the M13 wild-type phage significantly differed with scFv-phage clone no. 4 testing with Di(a+b+) RBCs (P &lt; 0.05) and no significant difference was observed when testing with Di(a−b+) RBCs. In conclusion, phage-derived monoclonal mouse antibody specific to the Dia blood group antigen was successfully produced. It warrants further development for use as a diagnostic reagent.
DOI: 10.14457/tu.the.2021.1295
title: Modification of acidocin peptide with enhanced antimicrobial activity against foodborne pathogen, Salmonella enterica serovar Typhimurium

description: Among foodborne Salmonella causing salmonellosis, Salmonella enterica serovar Typhimurium (S. enterica serovar Typhimurium) is the most frequently found serovar globally. The main reason of human infections with S. enterica serovar Typhimurium is the consumption of contaminated foods, notably eggs, meat, and milk. This raises the awareness of consumers to have good hygiene practices and urging the development of new preservatives to ensure food safety, avoid any loss during food processing, transportation and prolong the shelf life. One of promising compounds is antimicrobial peptide (AMP) which showed a potential to be developed as a new class of food preservative agents besides nisin, the only approved antimicrobial peptide used currently. Among them, bacteriocins produced by lactic acid bacteria (LAB) have attracted increasing attention, since they are recognized as safe for human use with low or no toxicity. Acidocin J1132β a bacteriocin produced by probiotic Lactobacillus acidophilus, displayed no toxic activity to human, however it exhibited low and narrow-spectrum antimicrobial activity. To overcome this obstacle and further exploit it as food preservatives, modification of this peptide is challenging yet feasible. Based on key structural and physicochemical parameters, four peptide derivatives (A5, A6, A9, and A11) were modified from acidocin J1132β by truncation and amino acid substitution. Among them, A11 showed the highest antimicrobial activity especially against S. enterica serovar Typhimurium, with a favorable safety profile. It tended to form an α-helix structure upon encountering the negatively charged-mimicking environments. A11 caused transient membrane permeabilization and killed bacterial cells through membrane depolarization and/or intracellular mechanism as observed by its interaction with bacterial DNA. A11 mostly maintained its inhibitory effect even exposure to high temperature up to 100°C. Notably, it exhibited inhibitory effect toward drug-resistant foodborne S. enterica serovar Typhimurium and its monophasic variant strains. Furthermore, the combination of A11 with nisin showed synergistic effect against drug-resistant strains in vitro. In food preservation assay, the growth rate of S. enterica serovar Typhimurium in raw chicken meat was significantly reduced by the combined use of A11 with nisin treatment during 72 hours of refrigerated storage. Taken together, this study indicated that a novel antimicrobial peptide derivative modified from acidocin J1132β, A11, could be applied potentially in the food industry as a food bio-preservative to control the S. enterica serovar Typhimurium contamination in food processing.
DOI: 10.15468/dl.77eyjq
title: Occurrence Download

description: A dataset containing 80069 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Living Specimen, Fossil)",
 "TaxonKey is Lepidoptera"
 ]
}

 The dataset includes 80069 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0073623-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14457/tu.the.2020.1485
title: Antimalarial activity and mechanism of action determination of mitochondria-penetrating peptide: a key to increase antimalarial drug efficacy

description: Mitochondrion is considered as a novel drug target as it plays a key role in energy production and programmed cell death of eukaryotic cells. The difference of mitochondria of malaria parasites from those of their vertebrate hosts contribute to the drug selectivity and might be a good target for antimalarial drug development. Mitochondria-penetrating peptide or MPP can pass through the red blood cell membrane without disruption or destruction and subsequently killed the blood stage malaria, P. falciparum. MPP showed more potent antimalarial activity toward late stage (trophozoite and schizont) parasite which is comparable to high intensity of MPP localized in parasites’ mitochondria observed by confocal microscopy. Moreover, MPP exhibited high antimalarial activity against chloroquine-resistant K1 strain of P. falciparum. MPP showed very low toxic toward normal mouse fibroblast L929 cells, human peripheral white blood cells (PBMCs) and red blood cells at the concentration from 1 ng/mL to 10 µg/mL. At the highest concentration of MPP (100 µg/mL), the (2)cytotoxicity and hemolytic activity were observed, however the concentration is around thousand times higher than that of antimalarial activity. The combination of atovaquone could significantly reduce the IC50 value of MPP in five isolates including standard strain (K1 and 3D7) and three field isolated strains (KY564, J1 and J8). The mechanism of MPP was confirmed by the localization and membrane potential determination experiments. It localized at the mitochondria of living malaria parasite and caused a complete loss or collapse of mitochondrial membrane potential in five out of seven strains of P. falciparum including chloroquine-resistant strain K1. As far as we aware, this is the first report on antimalarial activity of MPP by the disruption or collapse of parasites’ mitochondrial membrane potential.