cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3543914.v1
title: Appendix B. Survival to pupation of L. sinapis and L. reali larvae reared in different temperatures on different host plants and their resulting development pathway (direct/diapause development).

description: Survival to pupation of L. sinapis and L. reali larvae reared in different temperatures on different host plants and their resulting development pathway (direct/diapause development).
DOI: 10.6084/m9.figshare.3543911
title: Appendix C. The impact of species affiliation, larval host plant (Lathyrus linifolius/Lathyrus pratensis), temperature, and interactions between these three categorical factors on survival until pupation.

description: The impact of species affiliation, larval host plant (Lathyrus linifolius/Lathyrus pratensis), temperature, and interactions between these three categorical factors on survival until pupation.
DOI: 10.6084/m9.figshare.3543911.v1
title: Appendix C. The impact of species affiliation, larval host plant (Lathyrus linifolius/Lathyrus pratensis), temperature, and interactions between these three categorical factors on survival until pupation.

description: The impact of species affiliation, larval host plant (Lathyrus linifolius/Lathyrus pratensis), temperature, and interactions between these three categorical factors on survival until pupation.
DOI: 10.6084/m9.figshare.3543908
title: Appendix A. A figure illustrating the life histories of individuals in the population.

description: A figure illustrating the life histories of individuals in the population.
DOI: 10.6084/m9.figshare.3543908.v1
title: Appendix A. A figure illustrating the life histories of individuals in the population.

description: A figure illustrating the life histories of individuals in the population.
DOI: 10.6084/m9.figshare.3543905
title: Appendix B. Detailed summary of the relative bias, standard error, and mean square error of the integrated and conventional analyses.

description: Detailed summary of the relative bias, standard error, and mean square error of the integrated and conventional analyses.
DOI: 10.6084/m9.figshare.3543902
title: Supplement 1. The R and WinBUGS codes used in the paper.

description: File List IPM_RCODE.txt IPM_WinBUGS.bug Description "IPM_RCODE.txt" : This file contains R codes to perform the following: To create the population data, which is the complete life history of each individual in the population.To create completely independent and dependent samples for the three studies (capture-recapture, population survey and reproductive success studies).To create capture-recapture data, population survey data and reproductive success data using individuals that are subject to each study. To analyze the data sets using a Bayesian framework calling WinBUGS from R using R2WinBUGS. "IPM_WinBUGS.bug" : This file contains WinBUGS codes to perform the following analyses: Integrated population model using three data sets (capture-recapture, population survey and reproductive success data) (IPM3)Integrated population model using two data sets (capture-recapture and population survey data) (IPM2)The Cormack-Jolly-Seber (CJS) model for capture-recapture data The Poisson model for reproductive success data
DOI: 10.6084/m9.figshare.3543902.v1
title: Supplement 1. The R and WinBUGS codes used in the paper.

description: File List IPM_RCODE.txt IPM_WinBUGS.bug Description "IPM_RCODE.txt" : This file contains R codes to perform the following: To create the population data, which is the complete life history of each individual in the population.To create completely independent and dependent samples for the three studies (capture-recapture, population survey and reproductive success studies).To create capture-recapture data, population survey data and reproductive success data using individuals that are subject to each study. To analyze the data sets using a Bayesian framework calling WinBUGS from R using R2WinBUGS. "IPM_WinBUGS.bug" : This file contains WinBUGS codes to perform the following analyses: Integrated population model using three data sets (capture-recapture, population survey and reproductive success data) (IPM3)Integrated population model using two data sets (capture-recapture and population survey data) (IPM2)The Cormack-Jolly-Seber (CJS) model for capture-recapture data The Poisson model for reproductive success data
DOI: 10.6084/m9.figshare.3543899
title: Data Paper. Data Paper

description: File List Files are ASCII text, tab-delimited. No compression schemes were used. all_plots_1935_1948.txt -- data for all stems measured in 1935 and 1948. all_plots_1974-1980.txt -- data for all stems measured in 1974 through 1980. upland_plots_89-07.txt -- data for upland plots mapped and measured two or more times, 1989 through 2007. swamp_all_modern.txt -- data for wetland plots censused from 1992 through 2007. species_codes.txt -- four-letter codes and full names for all species. sampling_history.txt -- table summarizing sampling history for all plots. Description Established in 1935, a regular grid of 256 permanent plots includes about 20% of a 100-ha old-growth forest at the Dukes Research Natural Area in northern Michigan, USA. Woody stems have been remeasured 3–7 times providing extensive quantitative records of population and community dynamics over periods of up to 72 years. Woody stems in upland hemlock–northern hardwood stands, about half of the study plots, have been mapped and individually tracked since about 1990. Remaining plots are in swampy stands dominated by <em>Fraxinus nigra</em> and <em>Thuja occidentalis</em>. Detailed, long-term demographic data for late-successional forests are rare in general; this data set is both of exceptional duration and unusual in spatial intensity and detail. Because sample plots are in a regular array over the stand, they can support analyses of spatiotemporal pattern at various scales. A major wind disturbance in 2002 provides a unique opportunity to compare disturbance response to baseline dynamics. Several publications based on this data set have already provided new insights into late-successional processes, but general availability of the data set with metadata should permit a range of further comparative and integrative analyses. The study is ongoing, and new measurements will be added to the archived data set. Several ancillary data sets are available from the author. <i>Key words: </i>Acer saccharum<i><em>;</em></i> Betula alleghaniensis<i><em>;</em></i> Fagus grandifolia<i><em>;</em> </i>Fraxinus nigra<i><em>;</em> <em>long-term studies; northern hardwood forest; old-growth forest; permanent plots; succession; </em></i>Thuja occidentalis<i><em>;</em> <em>tree mapping; </em></i>Tsuga canadensis.
DOI: 10.6084/m9.figshare.3543899.v1
title: Data Paper. Data Paper

description: File List Files are ASCII text, tab-delimited. No compression schemes were used. all_plots_1935_1948.txt -- data for all stems measured in 1935 and 1948. all_plots_1974-1980.txt -- data for all stems measured in 1974 through 1980. upland_plots_89-07.txt -- data for upland plots mapped and measured two or more times, 1989 through 2007. swamp_all_modern.txt -- data for wetland plots censused from 1992 through 2007. species_codes.txt -- four-letter codes and full names for all species. sampling_history.txt -- table summarizing sampling history for all plots. Description Established in 1935, a regular grid of 256 permanent plots includes about 20% of a 100-ha old-growth forest at the Dukes Research Natural Area in northern Michigan, USA. Woody stems have been remeasured 3–7 times providing extensive quantitative records of population and community dynamics over periods of up to 72 years. Woody stems in upland hemlock–northern hardwood stands, about half of the study plots, have been mapped and individually tracked since about 1990. Remaining plots are in swampy stands dominated by <em>Fraxinus nigra</em> and <em>Thuja occidentalis</em>. Detailed, long-term demographic data for late-successional forests are rare in general; this data set is both of exceptional duration and unusual in spatial intensity and detail. Because sample plots are in a regular array over the stand, they can support analyses of spatiotemporal pattern at various scales. A major wind disturbance in 2002 provides a unique opportunity to compare disturbance response to baseline dynamics. Several publications based on this data set have already provided new insights into late-successional processes, but general availability of the data set with metadata should permit a range of further comparative and integrative analyses. The study is ongoing, and new measurements will be added to the archived data set. Several ancillary data sets are available from the author. <i>Key words: </i>Acer saccharum<i><em>;</em></i> Betula alleghaniensis<i><em>;</em></i> Fagus grandifolia<i><em>;</em> </i>Fraxinus nigra<i><em>;</em> <em>long-term studies; northern hardwood forest; old-growth forest; permanent plots; succession; </em></i>Thuja occidentalis<i><em>;</em> <em>tree mapping; </em></i>Tsuga canadensis.
DOI: 10.6084/m9.figshare.3543896
title: Appendix A. Inference for species–site group association indices.

description: Inference for species–site group association indices.
DOI: 10.6084/m9.figshare.3543893
title: Supplement 1. R package for performing indicator species analyses.

description: File List indicspecies_1.2_source.tar.gz - R package source code and help files<br> indicspecies_1.2_mac.tar.gz - Compiled package for Mac<br> indicspecies_1.2_win.zip - Compiled package for Windows<br> Description We provide the source code and the compiled code (for Mac and Windows platforms) of an R package called indicspecies. This package provides a set of functions to assess the strength of species site group associations. It is also possible to check the statistical significance of such associations. Use function strassoc for assessing strength of associations and generating bootstrap confidence intervals, and function signassoc to assess the statistical significance of the associations. A much more complete function is multipatt.
DOI: 10.6084/m9.figshare.3543890
title: Appendix A. An extension for nonuniform turning angles.

description: An extension for nonuniform turning angles.
DOI: 10.6084/m9.figshare.3543890.v1
title: Appendix A. An extension for nonuniform turning angles.

description: An extension for nonuniform turning angles.
DOI: 10.6084/m9.figshare.3543887
title: Appendix B. A comparison between empirical step-length distributions and the resource-independent movement kernel.

description: A comparison between empirical step-length distributions and the resource-independent movement kernel.
DOI: 10.6084/m9.figshare.3543887.v1
title: Appendix B. A comparison between empirical step-length distributions and the resource-independent movement kernel.

description: A comparison between empirical step-length distributions and the resource-independent movement kernel.
DOI: 10.6084/m9.figshare.3543884
title: Appendix C. Details on using conditional logistic regressions to estimate Step Selection Functions.

description: Details on using conditional logistic regressions to estimate Step Selection Functions.
DOI: 10.6084/m9.figshare.3543881
title: Appendix D. Regression results.

description: Regression results.
DOI: 10.6084/m9.figshare.3543878
title: Appendix A. Simulation of turning angles in CCRW.

description: Simulation of turning angles in CCRW.
DOI: 10.6084/m9.figshare.3543878.v1
title: Appendix A. Simulation of turning angles in CCRW.

description: Simulation of turning angles in CCRW.
DOI: 10.6084/m9.figshare.3543875
title: Appendix B. Maximum-likelihood method and Akaike weights.

description: Maximum-likelihood method and Akaike weights.
DOI: 10.6084/m9.figshare.3543872
title: Appendix C. Additional plots for rediscretization of paths where the entire random walk is used for each value of the sampling period, r, resulting in different subsample sizes.

description: Additional plots for rediscretization of paths where the entire random walk is used for each value of the sampling period, r, resulting in different subsample sizes.
DOI: 10.6084/m9.figshare.3543872.v1
title: Appendix C. Additional plots for rediscretization of paths where the entire random walk is used for each value of the sampling period, r, resulting in different subsample sizes.

description: Additional plots for rediscretization of paths where the entire random walk is used for each value of the sampling period, r, resulting in different subsample sizes.
DOI: 10.6084/m9.figshare.3543869
title: Appendix A. The effects of the occurrence or nonoccurrence of successful prey attacks on movement distances during walking in foraging Intermediate Egrets.

description: The effects of the occurrence or nonoccurrence of successful prey attacks on movement distances during walking in foraging Intermediate Egrets.
DOI: 10.6084/m9.figshare.3543869.v1
title: Appendix A. The effects of the occurrence or nonoccurrence of successful prey attacks on movement distances during walking in foraging Intermediate Egrets.

description: The effects of the occurrence or nonoccurrence of successful prey attacks on movement distances during walking in foraging Intermediate Egrets.
DOI: 10.6084/m9.figshare.3543866
title: Appendix B. Spatial structures of main prey species for Intermediate Egrets.

description: Spatial structures of main prey species for Intermediate Egrets.
DOI: 10.6084/m9.figshare.3543866.v1
title: Appendix B. Spatial structures of main prey species for Intermediate Egrets.

description: Spatial structures of main prey species for Intermediate Egrets.
DOI: 10.6084/m9.figshare.3543863
title: Appendix A. Method description of rRNA gene sequence analyses of fungi and bacteria.

description: Method description of rRNA gene sequence analyses of fungi and bacteria.
DOI: 10.6084/m9.figshare.3543860
title: Appendix B. The δ13C values of amino acids from fungi, bacteria, and plants.

description: The δ13C values of amino acids from fungi, bacteria, and plants.
DOI: 10.6084/m9.figshare.3543857
title: Appendix C. Summary of linear discriminant analysis of 13C variation among seven and three essential amino acids.

description: Summary of linear discriminant analysis of 13C variation among seven and three essential amino acids.
DOI: 10.6084/m9.figshare.3543854
title: Appendix D. Results of ANOVA with factors affecting amino acid δ13C values.

description: Results of ANOVA with factors affecting amino acid δ13C values.
DOI: 10.6084/m9.figshare.3543851
title: Appendix E. Linear discriminant analysis of fungi, bacteria, and plants using 13C variations among the three most informative amino acids.

description: Linear discriminant analysis of fungi, bacteria, and plants using 13C variations among the three most informative amino acids.
DOI: 10.6084/m9.figshare.3543842
title: Appendix F. The δ13C values of individual nonessential amino acids for each taxon relative to their respective means.

description: The δ13C values of individual nonessential amino acids for each taxon relative to their respective means.
DOI: 10.6084/m9.figshare.3543839
title: Appendix G. Linear discriminant analysis using 13C variations among six essential amino acids of the present study and those of Scott et al. (2006).

description: Linear discriminant analysis using 13C variations among six essential amino acids of the present study and those of Scott et al. (2006).
DOI: 10.6084/m9.figshare.3543836
title: Appendix A. Foliar spraying, and seed trap photos at various sites in Colorado and Arizona, USA.

description: Foliar spraying, and seed trap photos at various sites in Colorado and Arizona, USA.
DOI: 10.6084/m9.figshare.3543836.v1
title: Appendix A. Foliar spraying, and seed trap photos at various sites in Colorado and Arizona, USA.

description: Foliar spraying, and seed trap photos at various sites in Colorado and Arizona, USA.
DOI: 10.6084/m9.figshare.3543833
title: Appendix B. Maps showing the position of 15N enriched chili plants in Tumacacori, Arizona.

description: Maps showing the position of 15N enriched chili plants in Tumacacori, Arizona.
DOI: 10.6084/m9.figshare.3543833.v1
title: Appendix B. Maps showing the position of 15N enriched chili plants in Tumacacori, Arizona.

description: Maps showing the position of 15N enriched chili plants in Tumacacori, Arizona.
DOI: 10.6084/m9.figshare.3543830
title: Appendix A. Model parameters: methods for their estimation in the field.

description: Model parameters: methods for their estimation in the field.
DOI: 10.6084/m9.figshare.3543830.v1
title: Appendix A. Model parameters: methods for their estimation in the field.

description: Model parameters: methods for their estimation in the field.
DOI: 10.6084/m9.figshare.3543827
title: Appendix B. Model parameterization: mean values of the parameters used in the models.

description: Model parameterization: mean values of the parameters used in the models.
DOI: 10.6084/m9.figshare.3543827.v1
title: Appendix B. Model parameterization: mean values of the parameters used in the models.

description: Model parameterization: mean values of the parameters used in the models.
DOI: 10.6084/m9.figshare.3543821
title: Appendix C. A table showing results of simple linear regression analyses in each microhabitat in which seedling recruitment occurred (including percentages of seeds and seedlings emerged and fates of seeds dispersed), along with figures showing the percentage of seeds and seedlings emerged contributed by dispersers in the three habitats and the fate of seeds dispersed in each habitat.

description: A table showing results of simple linear regression analyses in each microhabitat in which seedling recruitment occurred (including percentages of seeds and seedlings emerged and fates of seeds dispersed), along with figures showing the percentage of seeds and seedlings emerged contributed by dispersers in the three habitats and the fate of seeds dispersed in each habitat.
DOI: 10.6084/m9.figshare.3543821.v1
title: Appendix C. A table showing results of simple linear regression analyses in each microhabitat in which seedling recruitment occurred (including percentages of seeds and seedlings emerged and fates of seeds dispersed), along with figures showing the percentage of seeds and seedlings emerged contributed by dispersers in the three habitats and the fate of seeds dispersed in each habitat.

description: A table showing results of simple linear regression analyses in each microhabitat in which seedling recruitment occurred (including percentages of seeds and seedlings emerged and fates of seeds dispersed), along with figures showing the percentage of seeds and seedlings emerged contributed by dispersers in the three habitats and the fate of seeds dispersed in each habitat.
DOI: 10.6084/m9.figshare.3543818
title: Appendix A. Multivariate analysis of cross-shelf and vertical distributions of 34 species of crustacean larvae.

description: Multivariate analysis of cross-shelf and vertical distributions of 34 species of crustacean larvae.
DOI: 10.6084/m9.figshare.3543818.v1
title: Appendix A. Multivariate analysis of cross-shelf and vertical distributions of 34 species of crustacean larvae.

description: Multivariate analysis of cross-shelf and vertical distributions of 34 species of crustacean larvae.
DOI: 10.6084/m9.figshare.3543815
title: Appendix A. Map of study sites and photographs depicting a clutch of young eggs, an experimental patch reef, a damselfish feeder, and a male bicolor damselfish tending his nest.

description: Map of study sites and photographs depicting a clutch of young eggs, an experimental patch reef, a damselfish feeder, and a male bicolor damselfish tending his nest.
DOI: 10.6084/m9.figshare.3543815.v1
title: Appendix A. Map of study sites and photographs depicting a clutch of young eggs, an experimental patch reef, a damselfish feeder, and a male bicolor damselfish tending his nest.

description: Map of study sites and photographs depicting a clutch of young eggs, an experimental patch reef, a damselfish feeder, and a male bicolor damselfish tending his nest.
DOI: 10.6084/m9.figshare.3543812
title: Appendix B. Bicolor damselfish size distributions during the 2003 and 2004 experiments and for the 2004 experimental reefs used in the larval trait analyses.

description: Bicolor damselfish size distributions during the 2003 and 2004 experiments and for the 2004 experimental reefs used in the larval trait analyses.
DOI: 10.6084/m9.figshare.3543812.v1
title: Appendix B. Bicolor damselfish size distributions during the 2003 and 2004 experiments and for the 2004 experimental reefs used in the larval trait analyses.

description: Bicolor damselfish size distributions during the 2003 and 2004 experiments and for the 2004 experimental reefs used in the larval trait analyses.
DOI: 10.6084/m9.figshare.3543809
title: Appendix C. Time-averaged damselfish densities and sex ratios in the experiments at Rainbow Reef.

description: Time-averaged damselfish densities and sex ratios in the experiments at Rainbow Reef.
DOI: 10.6084/m9.figshare.3543809.v1
title: Appendix C. Time-averaged damselfish densities and sex ratios in the experiments at Rainbow Reef.

description: Time-averaged damselfish densities and sex ratios in the experiments at Rainbow Reef.
DOI: 10.6084/m9.figshare.3543806
title: Appendix A. Lake morphology, water chemistry, mean number of taxa per sample, and the total number of taxa found for the analysis of the compositional heterogeneity of invertebrate assemblages within lakes.

description: Lake morphology, water chemistry, mean number of taxa per sample, and the total number of taxa found for the analysis of the compositional heterogeneity of invertebrate assemblages within lakes.
DOI: 10.6084/m9.figshare.3543806.v1
title: Appendix A. Lake morphology, water chemistry, mean number of taxa per sample, and the total number of taxa found for the analysis of the compositional heterogeneity of invertebrate assemblages within lakes.

description: Lake morphology, water chemistry, mean number of taxa per sample, and the total number of taxa found for the analysis of the compositional heterogeneity of invertebrate assemblages within lakes.
DOI: 10.6084/m9.figshare.3543803
title: Appendix B. Morphology and concurrent water chemistry of the lakes used to investigate the compositional heterogeneity of invertebrate assemblages at among-lake scales.

description: Morphology and concurrent water chemistry of the lakes used to investigate the compositional heterogeneity of invertebrate assemblages at among-lake scales.
DOI: 10.6084/m9.figshare.3543803.v1
title: Appendix B. Morphology and concurrent water chemistry of the lakes used to investigate the compositional heterogeneity of invertebrate assemblages at among-lake scales.

description: Morphology and concurrent water chemistry of the lakes used to investigate the compositional heterogeneity of invertebrate assemblages at among-lake scales.
DOI: 10.6084/m9.figshare.3543800
title: Appendix C. Results of PERMANOVA analyses examining the effects of lake alkalinity and trophic status on the relative variability of the spatial distances among lakes sampled for invertebrates.

description: Results of PERMANOVA analyses examining the effects of lake alkalinity and trophic status on the relative variability of the spatial distances among lakes sampled for invertebrates.
DOI: 10.6084/m9.figshare.3543800.v1
title: Appendix C. Results of PERMANOVA analyses examining the effects of lake alkalinity and trophic status on the relative variability of the spatial distances among lakes sampled for invertebrates.

description: Results of PERMANOVA analyses examining the effects of lake alkalinity and trophic status on the relative variability of the spatial distances among lakes sampled for invertebrates.