cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.qkg4n6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Ptenidium ponteleccianum Strassen, 1955",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105182-240626123714530/datasets/export for details.
DOI: 10.15468/dl.9qx9t9
title: Occurrence Download

description: A dataset containing 333 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Micrargus apertus (O.Pickard-Cambridge, 1871)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 333 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105184-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g3n5m2
title: Occurrence Download

description: A dataset containing 1384 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Gonioctena decemnotata (Marsham, 1802)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 1384 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105185-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8rsc7r
title: Occurrence Download

description: A dataset containing 27335 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sphyrna mokarran (Rüppell, 1837)"
 ]
}

 The dataset includes 27335 records from 146 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105183-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2fdnvc
title: CCDC 2246503: Experimental Crystal Structure Determination

description: Related Article: Ramya Prabaharan, Abirami Arunachalam, Ramesh Rengan|2024|Dalton Trans.|53|13469|doi:10.1039/D4DT01845A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hjpqg
title: CCDC 2309956: Experimental Crystal Structure Determination

description: Related Article: Suraj Singh, Rohtash Kumar, Navneet Nandgopal Dubey, Chandrakumar Appayee|2024|Chem.Commun.|60|8768|doi:10.1039/D4CC03132F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k0qgs
title: CCDC 2354185: Experimental Crystal Structure Determination

description: Related Article: Zhen-Sha Ma, Hui Yang, Kai Xing, Kang Zhou, Gonghao Lu, Xiao-Yuan Liu|2024|Dalton Trans.|53|13320|doi:10.1039/D4DT01729C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f6l8j
title: CCDC 2240657: Experimental Crystal Structure Determination

description: Related Article: Yi-Qi Tian, Lin-Fang Dai, Wen-Lei Mu, Wei-Dong Yu, Jun Yan, Chao Liu|2023|Chemical Science|14|14280|doi:10.1039/D3SC06046B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.h3kjkd
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Ptenidium matthewsi C.Flach, 1887",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105186-240626123714530/datasets/export for details.
DOI: 10.15468/dl.948ea7
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Gonioctena flavicornis (Suffrian, 1851)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 43 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105188-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hwjq5m
title: Occurrence Download

description: A dataset containing 2401613 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Papaveraceae"
 ]
}

 The dataset includes 2401613 records from 4779 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105055-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.23751808.v1
title: Additional file 8 of The determination of peanut (Arachis hypogaea L.) pod-sizes during the rapid-growth stage by phytohormones

description: Additional file 8: Table S6. DEGs related to phytohormones.
DOI: 10.6084/m9.figshare.13266108
title: Additional file 23 of Tumor-derived exosomal miR-934 induces macrophage M2 polarization to promote liver metastasis of colorectal cancer

description: Additional file 23: Table S8. The top 191 miR-934-correlated genes in TCGA cohorts.
DOI: 10.6084/m9.figshare.23751805.v1
title: Additional file 7 of The determination of peanut (Arachis hypogaea L.) pod-sizes during the rapid-growth stage by phytohormones

description: Additional file 7: Table S5. KEGG enrichment analysis.
DOI: 10.6084/m9.figshare.13266108.v1
title: Additional file 23 of Tumor-derived exosomal miR-934 induces macrophage M2 polarization to promote liver metastasis of colorectal cancer

description: Additional file 23: Table S8. The top 191 miR-934-correlated genes in TCGA cohorts.
DOI: 10.6084/m9.figshare.23751799.v1
title: Additional file 5 of The determination of peanut (Arachis hypogaea L.) pod-sizes during the rapid-growth stage by phytohormones

description: Additional file 5: Table S3. GO enrichment analysis.
DOI: 10.6084/m9.figshare.13266237.v1
title: Additional file 2 of A cross-sectional study on associations of physical symptoms, health self-efficacy, and suicidal ideation among Chinese hospitalized cancer patients

description: Additional file 2: Table 1 Multiple logistic regression analysis with the backward method in cancer patients. Table 2 Correlations between main variables (n = 544). Table 3. Multivariate Logistic Regression Analyses for Predictive Factors of Suicidal Ideation in Cancer Patients. (N = 544). Table 4. Association between physical symptoms, health self-efficacy, and suicidal ideation (N = 544).
DOI: 10.6084/m9.figshare.13266237
title: Additional file 2 of A cross-sectional study on associations of physical symptoms, health self-efficacy, and suicidal ideation among Chinese hospitalized cancer patients

description: Additional file 2: Table 1 Multiple logistic regression analysis with the backward method in cancer patients. Table 2 Correlations between main variables (n = 544). Table 3. Multivariate Logistic Regression Analyses for Predictive Factors of Suicidal Ideation in Cancer Patients. (N = 544). Table 4. Association between physical symptoms, health self-efficacy, and suicidal ideation (N = 544).
DOI: 10.6084/m9.figshare.14314700.v1
title: Additional file 7 of Multi-omics characterization and validation of invasiveness-related molecular features across multiple cancer types

description: Additional file 7: Figure S2. (A) The prognostic value of the GSVA score based on other three invasiveness gene signature in LUAD patients. (B) Heatmaps exhibit the distribution of expression level of the 24 invasiveness-signature-genes in patients from high- and low-invasiveness score group in 30 cancer types. Figure S3. (A) The distribution of tumor stage in high- and low-invasiveness score group in different cancer types. Only cancers with reliable and available stage information were displayed here. (B) The circos plot exhibits invasiveness-related metabolites in BRCA patients. The length of each arc indicates the Spearman correlation between the invasiveness score and a series of metabolites. Two positively-correlated metabolites with the highest r were displayed in the plot. Data S1. Gene signatures mentioned in the study for GSVA/ssGSEA analysis. Data S2. Invasiveness score of the 9672 patients from 33 cancer types in TCGA. Data S3. Invasiveness-associated molecular features across 30 cancer types (high-invasiveness vs. low-invasiveness). Data S4. The spearman correlation of imputed drug response (GDSC) and invasiveness-related gene expression level. Data S5. Enriched invasiveness-related GO biological process across 30 cancer types. Data S6. Invasiveness related differentially expressed and methylated genes across 30 cancer types. Data S7. The targeting relationship and fold change (high-invasiveness vs. low-invasiveness) of invasiveness-related miRNA and genes across 30 cancer types. Data S8. Correlation between drug response data and the expression level of gene or miRNA and the targeting relationship between miRNA and genes in ESCA (up-regulated genes). Data S9. Correlation between drug response data and the expression level of gene or miRNA and the targeting relationship between miRNA and genes in ESCA (down-regulated genes).
DOI: 10.5281/zenodo.10650982
title: Assemblies from "Nanopore and Illumina Sequencing Reveal Different Viral Populations from Human Gut Samples"

description: This repository houses the assembly data derived from a comparative study focused on the recovery of viral genomes from human faecal samples. Our research aimed to evaluate the effectiveness of different sequencing technologies—specifically, Illumina short-read and Oxford Nanopore Technology (ONT) long-read sequencing—and their assembly strategies in viromics. The broader goal was to enhance our understanding of viral diversity within the human gut microbiome through advanced sequencing techniques.
DOI: 10.5281/zenodo.10650983
title: Assemblies from "Nanopore and Illumina Sequencing Reveal Different Viral Populations from Human Gut Samples"

description: This repository houses the assembly data derived from a comparative study focused on the recovery of viral genomes from human faecal samples. Our research aimed to evaluate the effectiveness of different sequencing technologies—specifically, Illumina short-read and Oxford Nanopore Technology (ONT) long-read sequencing—and their assembly strategies in viromics. The broader goal was to enhance our understanding of viral diversity within the human gut microbiome through advanced sequencing techniques.
DOI: 10.5281/zenodo.10642243
title: IODP Expedition 390C Bulk Density (GRA)

description: Gamma ray attenuation (GRA) data were acquired using a Cs-137 collimated source and a sodium iodide (thallium), or NaI(Tl), scintillation detector. The signal was calibrated using water and aluminum standards to provide a proxy for bulk density. This measurement was performed by a sensor mounted on either the Whole-Round Multisensor Logger (WRMSL) or the Special Task Multisensor Logger (STMSL); which track was used for a given data set is indicated in the data.
DOI: 10.5281/zenodo.10642244
title: IODP Expedition 390C Bulk Density (GRA)

description: Gamma ray attenuation (GRA) data were acquired using a Cs-137 collimated source and a sodium iodide (thallium), or NaI(Tl), scintillation detector. The signal was calibrated using water and aluminum standards to provide a proxy for bulk density. This measurement was performed by a sensor mounted on either the Whole-Round Multisensor Logger (WRMSL) or the Special Task Multisensor Logger (STMSL); which track was used for a given data set is indicated in the data.
DOI: 10.5281/zenodo.10642247
title: IODP Expedition 390C Hole drilling summary

description: Report includes detailed drilling data: BHA length, bit parameters, and primary depth measurements.
DOI: 10.5281/zenodo.10642248
title: IODP Expedition 390C Hole drilling summary

description: Report includes detailed drilling data: BHA length, bit parameters, and primary depth measurements.
DOI: 10.6084/m9.figshare.23751821.v1
title: Additional file 1 of Assessment of bidirectional relationships between brain imaging-derived phenotypes and stroke: a Mendelian randomization study

description: Additional file 1: Table S1. Information for the GWAS summary data used in this study. Table S2. Genetic correlation between IDPs and strokes. Table S3. Outliers detected by RadialMR in forward MR. Table S4. Outliers detected by RadialMR in reverse MR. Table S5. IVs associated with confounders in forward MR. Table S6. IVs associated with confounders in reverse MR. Table S7. The information of IVs for all exposure-outcome pairs in forward MR. Table S8. The information of IVs for all exposure-outcome pairs in reverse MR. Table S9. Forward MR analysis results. Table S10. Reverse MR analysis results. Table S11. Pleiotropy test for significant results of the forward MR. Table S12. Pleiotropy test for significant results of the reverse MR.
DOI: 10.5281/zenodo.10642284
title: IODP Expedition 390C Magnetic susceptibility (point or contact system)

description: Magnetic susceptibility was measured on section halves on the Section Half Multisensor Logger (SHMSL) using a Bartington MS2 meter and either a MS2E or MS2K probe. Because all JRSO cores meet minimum size requirements for these two probes, MSPOINT data are corrected for volume and recorded in SI susceptibility units (x10-5).
DOI: 10.5281/zenodo.10642285
title: IODP Expedition 390C Magnetic susceptibility (point or contact system)

description: Magnetic susceptibility was measured on section halves on the Section Half Multisensor Logger (SHMSL) using a Bartington MS2 meter and either a MS2E or MS2K probe. Because all JRSO cores meet minimum size requirements for these two probes, MSPOINT data are corrected for volume and recorded in SI susceptibility units (x10-5).
DOI: 10.5281/zenodo.10642237
title: IODP Expedition 390C Formation temperature

description: Formation temperature was measured by the advanced piston corer temperature tool (APCT-3), Sediment Temperature Tool (SET), or sediment temperature pressure tool (SETP) and reduced to in situ temperature and (for SETP) pressure estimates. These data are compiled per instrument run and assigned to a core (the core cut with the APCT-3 cutting shoe or the core following the SET deployment).
DOI: 10.5281/zenodo.10642238
title: IODP Expedition 390C Formation temperature

description: Formation temperature was measured by the advanced piston corer temperature tool (APCT-3), Sediment Temperature Tool (SET), or sediment temperature pressure tool (SETP) and reduced to in situ temperature and (for SETP) pressure estimates. These data are compiled per instrument run and assigned to a core (the core cut with the APCT-3 cutting shoe or the core following the SET deployment).
DOI: 10.6084/m9.figshare.21131399
title: Interstitial lung disease associated with anti-HER2 anti-body drug conjugates: results from clinical trials and the WHO's pharmacovigilance database

description: Interstitial lung disease (ILD) events associated with anti-human epidermal growth factor receptor 2 (HER2) antibody-drug conjugates (ADCs) have aroused wide attention. In meta-analysis, we systematically reviewed literatures, and the outcomes were the proportion and risk of ILD related to anti-HER2 ADCs. A disproportionality analysis based on data from VigiBase was conducted to characterize the main features of anti-HER2 ADC-related ILD/pneumonitis. Two hundred and forty-five all-grade and 47 grade ≥ 3 ILD events with the proportion of 4.4% (95% confidence interval (CI) [2.0%, 6.8%]) and 0.5% (95% CI [0.3%, 0.8%]) were observed for anti-HER2 ADCs, respectively. Trastuzumab emtansine, trastuzumab deruxtecan and trastuzumab duocarmazine significantly increased the risk of all-grade and grade ≥ 3 ILD events with Peto odd ratios of 2.62 (95% CI [1.71, 4.04], P &lt; 0.0001) and 2.82 (95% CI [1.07, 7.42], P = 0.04), respectively. In VigiBase, 271 cases of ILD/pneumonitis related to trastuzumab emtansine and trastuzumab deruxtecan were extracted. The median time to the onset of event was 86 days and 54.95% of events occurred within 3 months. Trastuzumab emtansine, trastuzumab deruxtecan and trastuzumab duocarmazine increased the risk of ILD, which can lead to serious outcomes and tends to occur early.
DOI: 10.5281/zenodo.10642253
title: IODP Expedition 390C ICP-AES elemental analysis (solids)

description: Elemental contents in hard rock and sediment samples was measured by inductively coupled plasma - atomic emission spectrocopy (ICP-AES). Data are presented by element-wavelength pair (e.g., more than one calcium line may be reported). Elemental lines for which data do not exist for a particular expedition will not appear.
DOI: 10.5281/zenodo.10642254
title: IODP Expedition 390C ICP-AES elemental analysis (solids)

description: Elemental contents in hard rock and sediment samples was measured by inductively coupled plasma - atomic emission spectrocopy (ICP-AES). Data are presented by element-wavelength pair (e.g., more than one calcium line may be reported). Elemental lines for which data do not exist for a particular expedition will not appear.
DOI: 10.6084/m9.figshare.5926717.v1
title: Capture of pure toxic gases through porous materials from molecular simulations

description: In the last three decades, the air pollution is the main problem to affect human health and the environment in China and its contaminants include SO<sub>2,</sub> NH<sub>3,</sub> H<sub>2</sub>S, NO<sub>2</sub>, NO and CO. In this work, we employed grand canonical Monte Carlo simulations to investigate the adsorption capability of metal-organic frameworks (MOFs) and covalent organic frameworks (COFs) for these toxic gases. Eighty-nine MOFs and COFs were studied, and top-10 adsorption materials were screened for each toxic gas at room temperature. Dependence of the adsorption performance on the geometry and constructed element of MOFs/COFs was determined and the adsorption conditions were optimised. The open metal sites have mainly influenced the adsorption of NH<sub>3</sub>, H<sub>2</sub>S, NO<sub>2</sub> and NO. Especially, the X-DOBDC and XMOF-74 (X = Mg, Co, Ni, Zn) series of materials containing open metal sites are all best performance for adsorption of NH<sub>3</sub> to illustrate the importance of electrostatic interaction. Our simulation results also showed that ZnBDC and IRMOF-13 are good candidates to capture the toxic gases NH<sub>3,</sub> H<sub>2</sub>S, NO<sub>2</sub>, NO and CO. This work provides important insights in screening MOF and COF materials with satisfactory performance for toxic gas removal.
DOI: 10.6084/m9.figshare.14839672.v1
title: The diagnostic value of CEA for lung cancer-related malignant pleural effusion in China: a meta-analysis

description: To accurately evaluate the diagnostic value of carcinoembryonic antigen (CEA) for malignant pleural effusion associated with lung cancer in the Chinese population. Three English databases, PubMed, Embase and Web of Science, and two Chinese databases, China National Knowledge Infrastructure (CNKI) and Wanfang Data, up to 5 November 2020, were searched. The literature on the diagnosis of lung cancer-related malignant pleural effusion by CEA in the Chinese population were collected. The data was analyzed by Stata15.0 software. A total of 15 studies were included in the meta-analysis. The combined sensitivity, specificity, positive likelihood ratio, negative likelihood ratio, diagnostic odds ratio were 0.80 (95% CI: 0.74–0.84), 0.92 (95% CI: 0.89–0.95), 10.46 (95% CI: 7.29–15.00), 0.22 (95% CI: 0.17–0.28), 47.26 (95% CI: 28.84–77.44), respectively . The area under the receiver operating characteristic curve was 0.93 (95% CI: 0.91–0.95). No significant publication bias was found (<i>P</i> &gt; 0.05) CEA has anexcellent diagnostic value for patients with lung cancer-related malignant pleural effusion in the Chinese population.
DOI: 10.5281/zenodo.10642259
title: IODP Expedition 390C Interstitial water composite report

description: This composite report includes data from numerous interstitial water (IW) analyses (e.g., ICP-LIQUIDS and IONCHROM) in a variable set of columns. Each row combines the data from several tests (groups of measurements made on the same sample at the same time) for a particular IW sample. If data do not exist for a particular expedition, the column does not appear. To identify individual samples and tests, see each separate analysis (ALKALINITY, ICP-LIQUIDS, IONCHROM, SALINITY, SPEC, TITRATOR, and potentially others). Major and minor elements were determined by inductively coupled plasma-atomic emission spectrocsopy (ICP-LIQUIDS). Cations and anions were measured by ion chromatography (IONCHROM). Complex ions were measured by colorimetric measurements using a UV-VIS spectrometer (SPEC). Alkalinity and chloride was measured by titration (ALKALINITY and TITRATOR). Dissolved carbon (DC), dissolved inorganic carbon (DIC), and dissolved organic carbon (DOC) were measured by combustion in a total organic carbon (TOC) analyzer. Salinity was measured by refractometer (SALINITY). pH was measured by ion-selective electrode as part of the alkalinity procedure and is reported in the ALKALINITY analysis.