cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.hnxx92
title: Occurrence Download

description: A dataset containing 93 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trisateles emortualis (Denis & Schiffermüller), 1775",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 93 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224517-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y8nb7z
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Artemisia yunnanensis Jeffrey",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 25 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262970-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kusv65
title: Occurrence Download

description: A dataset containing 3184 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cercidiphyllum japonicum Siebold & Zucc."
 ]
}

 The dataset includes 3184 records from 154 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0273505-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.djzz2h
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bryanellocoris orientalis Hidaka, 1962",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 17 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224561-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z6rp7m
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Artemisia tangutica Pamp.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 33 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262966-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ycz7v
title: Occurrence Download

description: A dataset containing 1642 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Modern distribution of the European ground squirrel (Spermophilus citellus) in Ukraine"
 ]
}

 The dataset includes 1642 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245491-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s6w92a
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Notosacantha ihai Chûjô, 1958",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224542-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zustty
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asarum splendens (F.Maek.) C.Y.Cheng & C.S.Yang",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 19 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262980-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h67zhm
title: Occurrence Download

description: A dataset containing 1167511 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Charadrius semipalmatus Bonaparte, 1825"
 ]
}

 The dataset includes 1167511 records from 227 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0273506-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fpj9eh
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Armostus ohyamatensis Hoshina & Satô, 2006",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224560-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8akjj2
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asarum crispulatum C.Y.Cheng & C.S.Yang",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262974-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ehxu2
title: Occurrence Download

description: A dataset containing 455 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Davidia involucrata, Davidia involucrata, Davidia involucrata, 186100628, Davidia involucrata Baill., Davidia involucrata Baill., Davidia involucrata Baillon, Davidia involucrata Baill., Davidia involucrata Baill., Davidia involucrata Baill., Davidia involucrata Baill., Davidia involucrata Baill., Davidia involucrata marafivirus 2, Davidia involucrata marafivirus 1, Davidia involucrata marafivirus 2, Davidia involucrata marafivirus 1, Davidia involucrata Baill., 1871, Davidia involucrata Baill., Davidia involucrata Baill., Davidia involucrata Baill., Cornuvia serpula (Wigand) Rostaf., 1873, Cornuvia serpula (Wigand) Rostaf., Cathaya argyrophylla Chun & Kuang, Tsukada davidiifolia Wolfe & Wehr, Dryopteris wulingshanensis J. P. Shu, Y. H. Yan & R. J. Wang 2021, Dryopteris wulingshanensis J.P.Shu, Y.H.Yan & R.J.Wang, Chaetocauda sichuanensis Wang Youzhi 1985, Chaetocauda sichuanensis Wang, 1985, Davidia vilmoriniana Dode, Davidia vilmoriniana Dode, Davidia tibetana David, Davidia vilmoriniana Dode, Davidia laeta Dode, Davidia laeta Dode, Davidia vilmoriniana Dode, Davidia vilmoriniana Dode, Davidia laeta Dode, Davidia laeta Dode, Davidia laeta Dode, Davidia tibetana David, Davidia tibetana David, Davidia tibetana David, Davidia laeta Dode, Davidia tibetana David)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 455 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245486-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w8a7mp
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Elachiptera biculiminata Nishijima, 1956",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224537-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yvttaw
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asarum debile Franch.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262975-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z8cmcr
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lymantria fumida Butler, 1877",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 33 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0218621-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f7tzd6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mimela sakishimana Nomura, 1973",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224538-220831081235567/datasets/export for details.
DOI: 10.15468/dl.8jz3kp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neuroctenus taiwanicus Kormilev, 1955",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224540-220831081235567/datasets/export for details.
DOI: 10.15468/dl.5t49gn
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asparagus munitus F.T.Wang & S.C.Chen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262982-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4698xg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Glipostenoda lineatisuturalis Nomura, 1967",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224563-220831081235567/datasets/export for details.
DOI: 10.15468/dl.cahvwt
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asarum delavayi Franch.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262976-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nmfnmu
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corennys sericata Bates, 1884",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 46 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224567-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rw2jth
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is United States of America",
 "GadmGid is USA.3_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cosmos bipinnatus Cav."
 ]
}

 The dataset includes 45 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0248305-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3um8qb
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Janetiella infrafoli Monzen, 1955",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224565-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4zmb66
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asparagus yanyuanensis S.C.Chen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262984-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m9pyvz
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is United States of America",
 "GadmGid is USA.3_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cosmos bipinnatus Cav."
 ]
}

 The dataset includes 45 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0248306-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.543zqf
title: Occurrence Download

description: A dataset containing 5191163 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5191163 records from 2530 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0273509-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vekvbs
title: Occurrence Download

description: A dataset containing 619 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Year is greater than or equal to 1900",
 "TaxonKey is Fimbristylis schoenoides"
 ]
}

 The dataset includes 619 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023190-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5c6jp2
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lepraria eburnea",
 "Country is one of (Norway)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1986",
 "Year is less than or equal to 2025",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Machine Observation"
 ]
 }
 }
 ]
}

 The dataset includes 57 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023193-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rx78ah
title: Occurrence Download

description: A dataset containing 16626 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-180 -23.5,180 -23.5,180 23.5,-180 23.5,-180 -23.5))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Coordinate rounded, Geodetic datum assumed WGS84, Country derived from coordinates, Continent derived from coordinates, Occurrence status inferred from individual count, Institution match fuzzy, Coordinate reprojection suspicious, Collection match fuzzy)",
 "TaxonKey is Primates",
 "Year 1901-2026"
 ]
}

 The dataset includes 16626 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023192-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/n3x-sl0-ds3
title: Rhizoplaca melanophthalma (DC.) Leuckert & Poelt

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5281/zenodo.18665837
title: cccGIRSHPRUNG KASALLIGIDA JARROHLIK DAVOLASHNING ZAMONAVIY BOSQICHLARI VA FUNKSIONAL NATIJALARI

description: Girshprung kasalligini davolashda jarrohlik usuli yagona radikal davolash yo‘li hisoblanadi [1,7]. So‘nggi o‘n yilliklarda jarrohlik texnikalarining takomillashuvi natijasida kasallikni bir bosqichli va minimal invaziv usullar yordamida davolash imkoniyati paydo bo‘ldi [1,3,9]. Biroq jarrohlikdan keyingi funksional natijalar va asoratlar muammosi hanuz dolzarb bo‘lib qolmoqda [5,6,8].
DOI: 10.5281/zenodo.18665836
title: cccGIRSHPRUNG KASALLIGIDA JARROHLIK DAVOLASHNING ZAMONAVIY BOSQICHLARI VA FUNKSIONAL NATIJALARI

description: Girshprung kasalligini davolashda jarrohlik usuli yagona radikal davolash yo‘li hisoblanadi [1,7]. So‘nggi o‘n yilliklarda jarrohlik texnikalarining takomillashuvi natijasida kasallikni bir bosqichli va minimal invaziv usullar yordamida davolash imkoniyati paydo bo‘ldi [1,3,9]. Biroq jarrohlikdan keyingi funksional natijalar va asoratlar muammosi hanuz dolzarb bo‘lib qolmoqda [5,6,8].
DOI: 10.15468/dl.nkb8ta
title: Occurrence Download

description: A dataset containing 290313 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Cracidae",
 "Year 1000-2025"
 ]
}

 The dataset includes 290313 records from 634 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023170-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4ev8ef
title: Occurrence Download

description: A dataset containing 528 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Year is greater than or equal to 1900",
 "TaxonKey is Fimbristylis schultzii"
 ]
}

 The dataset includes 528 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023194-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h93a44
title: Occurrence Download

description: A dataset containing 114505 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Diarsia brunnea"
 ]
}

 The dataset includes 114505 records from 281 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023164-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v7stpd
title: Occurrence Download

description: A dataset containing 2959 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hertelidea botryosa",
 "Country is one of (Norway)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1986",
 "Year is less than or equal to 2025",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Machine Observation"
 ]
 }
 }
 ]
}

 The dataset includes 2959 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023195-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30265717
title: Supporting Metadata Curation from Public Life Science Databases Using Open-Weight Large Language Models

description: Supplementary FiguresSupplementary Figure 1: Distributions of self-reported positive probabilities for each model (Prompt 2)Distribution of the probability <i>p</i> output by each model when predicting that a project is “positive.” The figure highlights the frequency of ambiguous outputs near p = 0.5 and differences in confidence behavior across models.Supplementary Figure 2: Runtime comparison across models and reasoning settingsProcessing time per project for locally executed open-weight models and closed models accessed via APIs. The figure shows how model size, mixture-of-experts (MoE) vs. dense architectures, and thinking/reasoning settings affect throughput.Supplementary TablesSupplementary Table 1: Detailed runtime statistics for all modelsSummary statistics of processing times for each model and setting. Data that complement the runtime comparison shown in Supplementary Figure 2.Supplementary Table 2: Example outputs of sample attribute extraction from metadataExample tabular extraction generated by the LLM from project/sample metadata for projects classified as positive. The output includes user-specified items (genotype, tissue, treatment method, ABA concentration, treatment duration, etc.) and “Unspecified” outputs when metadata are missing.Supplementary Table 3: List of projects retrieved by keyword searches from the databaseA list of projects programmatically retrieved for the specified keywords and used in the metadata classification task by the language models.Supplementary Table 4: Ground-truth labels of the benchmark datasetBinary labels (positive/negative) curated by humans based on explicit statements in the integrated metadata text. Used as the reference for evaluating LLM classification outputs.Supplementary FilesSupplementary File 1: Integrated metadata text inputs used for LLM inferenceIntegrated text combining project-level overviews and sample-level metadata for each project.Supplementary File 2: Prompts used for the classification and extraction tasksFull text of Prompt 1 and Prompt 2 used for the classification task, as well as the prompt used for the extraction task.Supplementary File 3: Workflow outputs and LLM-generated results for all model conditionsOutput directories and files generated by the workflow, including programmatically retrieved metadata, JSON outputs for each model and prompt, and related outputs.<br>