cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7302/6jz8-7195
title: Planetary-scale Wave Impacts on the Venusian Upper Mesosphere and Lower Thermosphere: Supporting Datasets for VTGCM Numerical Simulations

description: This work examines the planetary wave-induced variability within the upper mesosphere/lower thermosphere  of  Venus  by  utilizing  the  Venus  Thermospheric  General  Circulation  Model  (VTGCM).    Rossby  and  Kelvin  wave  perturbations  are  driven  by  variations  in  the  geopotential  height of the VTGCM lower boundary (~70 km).  A suite of simulations was conducted to examine the impact of the individual and combined waves propagating from two different lower boundary conditions (uniform and varying).  The Kelvin wave is the more dominant wave which produces the  most  variability,  as  was  shown  in  Hoshino  et  al.,  2012.    The  combination  of  the  Kelvin  and  Rossby waves provides a maximum temperature amplitude of 13 K at 92 km and maximum zonal wind amplitude of 23 m/s at 102 km.  The combined waves overall are able to propagate up to 125 km.   Most of the variation within the temperature, winds, and composition occurs between 70 km and 110 km.  The varying lower boundary increases the magnitude of the wave deposition but weakly changes the propagation altitude.  The thermal variation due to the planetary waves does  not  reproduce  most  observed  variations.    The  simulated  O2  IR  nightglow  emission  is  sensitive to the waves with respect to intensity and local time, but lacks latitudinal variation. The integrated  intensity  ranges  from  1.2  MR  to  1.65  MR  and  the  local  time  ranges  from  0.33  local  time to 23.6 local time.  Overall, planetary waves do affect the atmospheric structure, but there are  still  observed  large  variations  that  planetary  waves  alone  cannot  explain  (i.e.  thermal  structure).
description: These data files are in support of the publication “Planetary-scale Wave Impacts on the Venusian Upper Mesosphere and Lower Thermosphere”.  The data files (NetCDF and .txt) are for the five Venus Thermospheric General Circulation Model (VTGCM) simulations used to create the figures and tables in the publication.  A metadata (README.txt) file is provided to explain the contents within each data file.
DOI: 10.7302/z5gd-0n53
title: Dataset for Modeling Reconnection-driven Dynamics at Ganymede's Upstream Magnetosphere

description: The largest moon in the solar system, Ganymede, is the only moon known to possess a strong intrinsic magnetic field and a corresponding magnetosphere.
Using the latest version of Space Weather Modeling Framework (SWMF), we study the upstream plasma interactions and dynamics in this sub-Alfvenic system.
Results from the Hall MHD and the coupled MHD with embedded Particle-in-Cell (MHD-EPIC) models are compared.
We find that under steady upstream conditions, magnetopause reconnection occurs in a non-steady manner.
Flux ropes of Ganymede's radius in length form on the magnetopause at a rate about 2/minute and create spatiotemporal variations in plasma and field properties.
Upon reaching proper grid resolutions, the MHD-EPIC model can resolve both electron and ion kinetics at the magnetopause and show localized non-gyrotropic behavior inside the diffusion region.
The estimated global reconnection rate from the models is about 80 kV with 60% efficiency, and there is weak evidence of about 1 minute periodicity in the temporal variations due to the dynamic reconnection process.
description: The Hall MHD and MHD-EPIC simulations are performed with the Space Weather Modeling Framework (SWMF) on Frontera supercomputer. The raw data are stored in Ranch at TACC. This dataset contains the data for the figures shown in the paper: H.Zhou et.al., "Reconnection-driven Dynamics at Ganymede's Upstream Magnetosphere: 3D Global Hall MHD and MHD-EPIC Simulations", Journal of Geophysical Research Space Physics.
The data are processed and visualized with the open source package [VisAna](https://github.com/henry2004y/VisAnaJulia).
DOI: 10.7302/pa6y-fb55
title: Single-molecule microscopy data for "An anionic ligand snap-locks a long-range interaction in a magnesium-folded riboswitch"

description: These data were generated to study the conformational dynamic of fluoride riboswitch as an isolated RNA and in presence of RNA polymerase at different transcript lengths.
description: All single molecule experiments were performed at room temperature on a prism-based TIRF microscope using a CCD (I-Pentamax, Princeton Instruments) or sCMOS camera (Hamamatsu ORCA-Flash4.0 V3) with the exposure time of 50 ms and 100 ms. A continuous laser source (532 nm) was used to excite Cy3 or DY547 and the emission from both donor (Cy3/DY547) and  acceptor (Cy5) were recorded with the same camera. Further, custom Matlab scripts was used for all of the smFRET data analysis. We manually selected the traces that adhere to the following criteria: Photobleaching in single step, a total fluorescence intensity (donor + acceptor) >250, at least 100 frames duration prior to photo-bleach. This process ensures that the selected traces are from the single donor-acceptor pairs, not from aggregates or background impurities. All selected traces were processed to subtract background and correct for cross-talk and fluorescence bleed-through, then FRET efficiency was measured and further kinetic analysis was performed.
DOI: 10.7302/xtws-d383
title: Data for Compensatory trans-regulatory alleles minimizing variation in TDH3 expression are common within Saccharomyces cerevisiae

description: .zip file includes data files and R code used for analysis. 
description: Methodology described in code itself as well as in accompanying  manuscript.
DOI: 10.7302/z2mw2fcd
title: Student Writing Eportfolio: "Jenna's" Capstone

description: This eportfolio was created for the Gateway course of the Sweetland Minor in Writing to provide an opportunity for students to reflect on their growing identities as writers, as captured in their text-based and multimodal compositions produced over the Gateway semester. The title of the work contains the pseudonym created for the study while the creator field lists the student's given name to allow proper attribution for their work. The eportfolio is collected here as an artifact in the Sweetland Writing Development Study, which has been published as Developing Writers in Higher Education: A Longitudinal Study (University of Michigan Press, 2019). To learn more about this study, please see the epublication: https://doi.org/10.3998/mpub.10079890), and to learn more about the Minor in Writing program and the eportfolio prompts, please see Appendix 2a (https://doi.org/10.3998/mpub.10079890.cmp.1) to the publication.
description: This link will download a zipped folder of files created with SiteSucker, “a Macintosh application that automatically downloads websites from the Internet. It does this by asynchronously copying the site's webpages, images, PDFs, style sheets, and other files to your local hard drive, duplicating the site's directory structure” (SiteSucker Manual: https://ricks-apps.com/osx/sitesucker/archive/2.x/2.6.x/2.6/manuals/en/pgs/Overview.html). 

To open the eportfolio website compressed in this zipped folder, you will need to double-click on the subfolder titledfirstnamelastname.wordpress.com (e.g., kaylacockrum.wordpress.com), and then double-click on the file titled index.html. Opening this file will launch a browser window showing the eportfolio home page, and from there you will be able to navigate the eportfolio website offline. Because this site is offline, external links to online urls will not function. (Please note that SiteSucker is not compatible with the Chrome browser, and should be opened using Firefox or Safari browsers.)
DOI: 10.7302/7ym7-gp78
title: Dataset: Models generated for the bioinformatic analysis of MPER/protein fusions binding to antibody

description: This project evaluated the binding of antibody fragments to membrane proteins fused to a short epitope sequence (“MPER”). This dataset includes atomic coordinates (.pdb files) for bioinformatic models of antibody fragment binding to an MPER epitope – membrane protein fusion. 
description: This dataset includes atomic coordinates (.pdb files) for bioinformatic models of antibody fragment binding to an MPER epitope – membrane protein fusion. For each membrane protein subject, MPER fusion was evaluated in several different registers, and evaluated for binding by four different antibody fragments. A model is provided for each fusion register and antibody fragment. More details about the methodology used in generating this data set are included in the readme file.
DOI: 10.7302/c9q3-4t11
title: Dogon Bankan Tey (Walo) Audio Files

description: Bankan Tey is a Dogon language spoken in the village complex Walo (also spelled Oualo) near Douentza in central Mali. It is closely related to Ben Tey within Dogon. As of May 2018, Bankan Tey remains on my “to do” list in terms of grammatical description and texts. These recordings were made in Walo in 2011 and have not yet been transcribed although there is a fair chance I will be able to work on them in the next few years. If nothing  materializes before 2022, I authorize other linguists to transcribe, translate, and/or analyse the texts. 
2011 side A
2011 side B
description: Digitized cassettes made on a tape recorder
DOI: 10.7302/z2f769sj
title: Galaxy Shape Catalogs for Dark Energy Survey Science Verification (DES-SV) Data - Additional Regions

description: This dataset is associated with the University of Michigan Dept. of Physics dissertation titled "Shedding Light on the Dark:  Exploring the Relation Between Galaxy Cluster Mass and Temperature Through Weak Gravitational Lensing" by Rutuparna Das.  It is also associated with a paper, currently in preparation, by Das et al (details to be added once paper is submitted/accepted).;This work contains information about shapes of galaxies observed by the Dark Energy Survey (DES) during its Science Verification (SV) run.  The official DES SV shape catalog has already been released to the public (see details in Jarvis et al. (2016), henceforth called "J16").  This work follows the methods presented in J16, and contains shapes from areas of the sky that were not processed as part of the official DES-SV catalog but were necessary for the work presented in the aforementioned dissertation.  Each catalog contains information for galaxies in a 80′ × 80′ cutout centered at a given galaxy cluster.;Note that these catalogs are not entirely analogous to the official DES-SV catalog. For one, we only measure shapes for galaxies, as stars and other objects were not needed for the dissertation. Our catalogs also only extend to a magnitude of 24 in r-band, whereas a small fraction of the objects in the official Im3shape catalog are dimmer (see Figure 29 of J16).;We also include other information necessary for weak lensing studies. Aside from all fields from Im3shape and noise bias calibration (listed and described in J16), these catalogs contain columns for object positions (“ra_gold”, “dec_gold”) and magnitudes in various filters (“mag_detmodel_g”, “mag_detmodel_r”, “mag_detmodel_i”, “mag_detmodel_z”) from the SVA1-Gold catalog (https://des.ncsa.illinois.edu/releases/sva1/docs/docs-gold). Additionally, we include mean redshift measurements from two DES photo-z measurement pipelines, TPZ and DESDM Neural Network (“z_TPZ”, “z_DESDMnn”) (more details in Sanchez et al. (2014)).;References:
Jarvis, M., Sheldon, E., Zuntz, J., et al. 2016, Monthly Notices of the Royal Astronomical Society, 460, 2245.
Sanchez, C., Carrasco Kind, M., Lin, H., et al. 2014, Monthly Notices of the Royal Astronomical Society, 445, 1482.
description: Used Im3shape (https://bitbucket.org/joezuntz/im3shape-git) v9 to measure galaxy shapes over ~70 square degrees of sky, focusing on areas containing galaxy clusters that are not covered by the official DES-SV data release.
DOI: 10.15468/dl.4r4gj2
title: Occurrence Download

description: A dataset containing 394982 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Abdra brachycarpa (Nutt.) Greene, Abelia chinensis R.Br., Abelia ×grandiflora (Rovelli ex André) Rehder, Abelmoschus esculentus (L.) Moench, Abelmoschus ficulneus (L.) Wight & Arn. ex Wight, Abelmoschus manihot (L.) Medik., Abelmoschus manihot subsp. manihot, Abelmoschus manihot subsp. tetraphyllus (Roxb. ex Hornem.) Borss.Waalk., Abelmoschus moschatus (L.) Medik., Abelmoschus moschatus subsp. moschatus, Abies alba Mill., Abies balsamea (L.) Mill., Abies cephalonica Loudon, Abies concolor (Gordon) Lindl. ex Hildebr., Abies firma Siebold & Zucc., Abies fraseri (Pursh) Poir., Abies grandis (Douglas ex D.Don) Lindl., Abies homolepis Siebold & Zucc., Abies koreana E.H.Wilson, Abies lasiocarpa (Hook.) Nutt., Abies mariesii Mast., Abies nordmanniana (Steven) Spach, Abies nordmanniana subsp. nordmanniana, Abies numidica de Lannoy ex Carrière, Abies pinsapo Boiss., Abies procera Rehd., Abies sibirica Ledeb., Abildgaardia ovata (Burm.f.) Kral, Abrus melanospermus Hassk., Abrus melanospermus subsp. melanospermus, Abrus precatorius L., Abrus precatorius subsp. africanus Verdc., Abrus precatorius subsp. precatorius, Abutilon abutiloides (Jacq.) Garcke, Abutilon auritum (Wall. ex Link) Sweet, Abutilon fruticosum Guill. & Perr., Abutilon grandiflorum G.Don, Abutilon grandifolium (Willd.) Sweet, Abutilon guineense (Schum.) Baker fil. & Exell, Abutilon hirtum (Lam.) Sweet, Abutilon hirtum var. hirtum, Abutilon hulseanum (Torr. & A.Gray) Torr. ex A.Gray, Abutilon indicum (L.) Sweet, Abutilon indicum subsp. albescens (Miq.) Borss.Waalk., Abutilon indicum subsp. indicum, Abutilon mollicomum (Willd.) Sweet, Abutilon pannosum (G.Forst.) Schltdl., Abutilon pannosum var. pannosum, Abutilon permolle (Willd.) Sweet, Abutilon pseudocleistogamum Hochr.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 394982 records from 1833 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021216-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/bsqgsl
title: Osmiine bees of the genus Haetosmia (Megachilidae, Osmiini): biology, taxonomy and key to species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Müller, Andreas, Griswold, Terry (2017): Osmiine bees of the genus Haetosmia (Megachilidae, Osmiini): biology, taxonomy and key to species. Zootaxa 4358 (2): 351-364, DOI: https://doi.org/10.11646/zootaxa.4358.2.8
DOI: 10.15468/elkhyd
title: A new species of Marsipococcus Cockerell & Bueker (Hemiptera: Coccomorpha: Coccidae) from Malaysia

description: This dataset contains the digitized treatments in Plazi based on the original journal article Łagowska, Bozena, Martin, Jon H., Hodgson, Chris J. (2017): A new species of Marsipococcus Cockerell & Bueker (Hemiptera: Coccomorpha: Coccidae) from Malaysia. Zootaxa 4358 (2): 295-310, DOI: https://doi.org/10.11646/zootaxa.4358.2.4
DOI: 10.15468/ut2tdx
title: First record of the genus Doliopteryx Hesse, 1956 (Diptera: Mythicomyiidae: Glabellulinae) from Iran, with description of two new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Gharali, Babak, Evenhuis, Neal (2017): First record of the genus Doliopteryx Hesse, 1956 (Diptera: Mythicomyiidae: Glabellulinae) from Iran, with description of two new species. Zootaxa 4358 (2): 393-400, DOI: https://doi.org/10.11646/zootaxa.4358.2.12
DOI: 10.7925/drs1.duchas_4922295
title: Grianán, Tiobraid Árann

description: A collection of folklore and local history stories from Grianán, Tiobraid Árann (school) (Greenane, Co. Tipperary), collected as part of the Schools' Folklore Scheme, 1937-1938 under the supervision of teacher Siobhán Ní Bhuachalla.
description: Eoghanacht / Buckley, J. -- Folklore - An Old Story / Dillon, Margaret -- Old Story / Treacy, Mary -- Greenane N.S. -- Old Story / Treacy, Thomas -- Old Story / Ryan, Margaret -- Old Story / Carroll, John -- Old Story / Ryan, Patrick -- Fort / Dillon, Margaret -- Cure for Cattle / Treacy, Mary -- Riddles -- Old Cures / Treacy, Mary -- Soloheadbeg -- Local Hero - Seán Treacy / Treacy, Mary -- Soloheadbeg Quarry / Dillon, Margaret -- There are very few farmhouses in the Greenane district. -- Local Place Names -- Eoghanacht / Buckley, J. -- Folklore - An Old Story / Dillon, Margaret -- Old Story / Treacy, Mary -- Greenane N.S. -- Old Story / Treacy, Thomas -- Old Story / Ryan, Margaret -- Old Story / Carroll, John -- Old Story / Ryan, Patrick -- Fort / Dillon, Margaret -- Cure for Cattle / Treacy, Mary -- Riddles -- Old Cures / Treacy, Mary -- Soloheadbeg -- Local Hero - Seán Treacy / Treacy, Mary -- Soloheadbeg Quarry / Dillon, Margaret -- There are very few farmhouses in the Greenane district. -- Local Place Names
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.7925/drs1.duchas_4922299
title: Emly (C.)

description: A collection of folklore and local history stories from Emly (C.) (school) (Emly, Co. Tipperary), collected as part of the Schools' Folklore Scheme, 1937-1938 under the supervision of teacher Brighid de Roiste.
description: St Ailbe / Moloney, Biddy -- Holy Wells -- Old Schools -- Weather-Lore -- Riddles / Roche, Frances P. -- Funny Stories -- Place Names and Meanings -- Hidden Treasure -- Old Crafts -- Roads -- Games -- Local Cures -- Travelling People -- Storms, Accidents Etc. -- Birds -- Famine -- St Ailbe / Moloney, Biddy -- Holy Wells -- Old Schools -- Weather-Lore -- Riddles / Roche, Frances P. -- Funny Stories -- Place Names and Meanings -- Hidden Treasure -- Old Crafts -- Roads -- Games -- Local Cures -- Travelling People -- Storms, Accidents Etc. -- Birds -- Famine
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.
DOI: 10.15468/fvlcgl
title: Taxonomy of ' Euconnus complex'. Part XVI. Alloconophron Franz transferred to Anhoraeomorphus Franz as subgenus, with notes on systematic position of Noctophus Casey (Coleoptera, Staphylinidae, Scydmaeninae)

description: This dataset contains the digitized treatments in Plazi based on the original journal volume Jałoszyński, Paweł (2017): Taxonomy of ' Euconnus complex'. Part XVI. Alloconophron Franz transferred to Anhoraeomorphus Franz as subgenus, with notes on systematic position of Noctophus Casey (Coleoptera, Staphylinidae, Scydmaeninae). Zootaxa 4358 (2), DOI: https://doi.org/10.11646/zootaxa.4358.2.6
DOI: 10.15468/uahurh
title: A new species of Macrosaccus (Lepidoptera: Gracillariidae: Lithocolletinae) from Arizona, USA

description: This dataset contains the digitized treatments in Plazi based on the original journal article Eiseman, Charles S., Davis, Donald R. (2017): A new species of Macrosaccus (Lepidoptera: Gracillariidae: Lithocolletinae) from Arizona, USA. Zootaxa 4358 (2): 385-392, DOI: https://doi.org/10.11646/zootaxa.4358.2.11
DOI: 10.15468/yozxed
title: A new subspecies of Short-toed Snake-eagle from Wallacea determined from morphological and DNA comparison

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ng, Nathaniel S. R., Christidis, Les, Olsen, Jerry, Norman, Janette, Rheindt, Frank E. (2017): A new subspecies of Short-toed Snake-eagle from Wallacea determined from morphological and DNA comparison. Zootaxa 4358 (2): 365-374, DOI: https://doi.org/10.11646/zootaxa.4358.2.9
DOI: 10.7925/drs1.duchas_4922300
title: Cnoc Bhruis (Mount Bruis)

description: A collection of folklore and local history stories from Cnoc Bhruis (Mount Bruis) (school) (Bruis, Co. Tipperary), collected as part of the Schools' Folklore Scheme, 1937-1938 under the supervision of teacher M. Ní Chuinneáin.
description: Moats - Mount Bruis Moat / Ryan, Emma -- Herbs - Herbs for Personal Ailments / Bailey, Johanna -- Herbs - Herbs as Cures for Animals / Bailey, Johanna -- Local Heroes - Poet / Neill, John O -- Local Heroes - Athlete / Conway, John -- Lore of Certain Days / Ryan, Emma -- Feast-Days - Stephen's Day / Bailey, Johanna -- Feast-Days - Hallow Eve / Ryan, Emma -- Feast-Days / Conway, John -- Lore of Certain Days / Bailey, Hanna -- Care of the Feet / Bailey, Hanna -- Care of the Feet / Bailey, Hanna -- Match-Making / Ryan, Emma -- Wedding / Neill, Eileen O -- Moats - Mount Bruis Moat / Ryan, Emma -- Herbs - Herbs for Personal Ailments / Bailey, Johanna -- Herbs - Herbs as Cures for Animals / Bailey, Johanna -- Local Heroes - Poet / Neill, John O -- Local Heroes - Athlete / Conway, John -- Lore of Certain Days / Ryan, Emma -- Feast-Days - Stephen's Day / Bailey, Johanna -- Feast-Days - Hallow Eve / Ryan, Emma -- Feast-Days / Conway, John -- Lore of Certain Days / Bailey, Hanna -- Care of the Feet / Bailey, Hanna -- Care of the Feet / Bailey, Hanna -- Match-Making / Ryan, Emma -- Wedding / Neill, Eileen O
description: Supported by funding from the Department of Arts, Heritage and the Gaeltacht (Ireland), University College Dublin, and the National Folklore Foundation (Fondúireacht Bhéaloideas Éireann), 2014-2016.