cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/kw7nb7bsmx.1
title: Digital analysis of anatomical parts - horse

description: The study shows the color difference between the anatomical piece before and after four different fixation methods, applying digital investigation using analysis of histograms and CIEDE2000 for color quality.
DOI: 10.17632/zt4bmnb5ch.1
title: Dataset - Durability in materials jetting: A long-term study

description: This folder contains data for the paper "Durability in materials jetting: A long-term study"
For more information please contact Ali Payami Golhin (payami.ag@gmail.com)

Abbreviations:
C:Cyan; M:Magenta; Y:Yellow; K:Black
GoG: Glossy on Glossy finish; GoM: Glossy on Matte finish
Inn: Inner (r-tray &lt; 120 mm), Mid: Middle (120 mm &lt; r-tray &lt; 180 mm) and O: Outer (180 mm &lt; r-tray &lt; 230 mm) Swath

Thickness in mm
X Y Z:CIEXYZ target; L a b:CIEL*a*b* target; L-ref a-ref b-ref:CIEL*a*b* Reference
DOI: 10.17632/s64mvk8v7k.1
title: Drivers of geophagy in red brocket deer (Mazama americana) at Amazonian interior forest mineral licks

description: Mineral licks are key ecological components of the Amazon rainforest, providing critical dietary functions for herbivorous and frugivorous mammals, which help maintain the structure and function of the forest itself through seed and nutrient dispersal. One of the most frequent visitors of interior forest mineral licks in the Amazon is the red brocket deer (Mazama americana), a large-bodied ruminant frugivore and seed predator. While several hypotheses for the drivers of geophagy exist, including mineral supplementation, toxin adsorption, and habitat selection, robust data on geophagy for the red brocket deer for large numbers of mineral licks is nonexistent. We used soil data from 83 mineral licks in conjunction with camera trap data from 52 of those mineral licks and a mixed-effects modeling approach to test the three proposed hypotheses of geophagy for the red brocket deer. We found that consumed soils at mineral licks had elevated concentrations of almost all major and minor biologically active minerals measured, including Ca, Na, Mg, K, Cu, Zn, and Mn. Model results suggest that all three hypotheses hold true to some extent for the red brocket deer, with the greatest support for the mineral supplementation hypothesis, in particular with respect to Mg, Ca, Na, Cu, and Zn. This study provides critical information on the feeding ecology of the red brocket deer in the wild, and the first robust analysis of geophagy of an Amazonian mammal involving a large sample size of interior forest mineral licks.
DOI: 10.17632/bm26bgg289.1
title: Crisaborole reverses dysregulation of the mild to moderate atopic dermatitis proteome towards nonlesional and normal skin

description: Background: Safe and effective long-term topical treatments for atopic dermatitis (AD) remain limited. 
Objective: In this phase 2a, single-center, intrapatient, vehicle-controlled study, we examine the mechanism of action of crisaborole 2% ointment, a topical nonsteroidal PDE4 inhibitor, in a proteomic analysis of 40 adults with mild-to-moderate AD and 20 healthy subjects.
Methods: Within the AD cohort, two target lesions were randomized in an intrapatient (1:1) manner to double-blind crisaborole/vehicle applied twice daily for 14 days. Punch biopsy specimens were collected for biomarker analysis at baseline from all participants, then from AD patients only at day 8 (optional) and day 15.
Results: Compared to the vehicle, crisaborole significantly reversed dysregulation of the overall lesional proteome and of key markers and pathways (e.g. Th2, Th17/Th22, T-cell activation) associated with AD pathogenesis towards both nonlesional and normal skin. Significant clinical correlations were observed with markers associated with nociception and Th2, Th17, and neutrophilic activation.
Limitations: Study limitations include predominance of white patients in the cohort, relatively short treatment time, and regimented administration of crisaborole.
Conclusion: Our results demonstrate crisaborole-induced normalization of the AD proteome towards both nonlesional and normal skin and further support topical PDE4 inhibition in the treatment of mild-to-moderate AD.
DOI: 10.17632/7zskzcd24p.1
title: Coastal-inland divergence and postglacial expansion in the populations of the orchid bee Euglossa annectans

description: This is the microsatellite dataset in the paper published in Journal of Apicultural Research. The dataset is stored as STRUCTURE software input (see the publication for methodological details).
DOI: 10.15468/dl.vrxtqt
title: Occurrence Download

description: A dataset containing 251 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Macrohasseltia L.O.Williams"
 ]
}

 The dataset includes 251 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004303-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/3b6py8ryzb.1
title: Polygynandry and high genetic diversity supported by kinship and population genetics from neotropical catfish ichthyoplankton

description: This is the SSR genotype dataset of the study. The data is coded as input for the GexAlex (Peakall & Smouse, 2012 - Bionformatics) EXEL (MS) extension.
Alleles sizes are coded as three numbers and missing data as 0. For methodological details, please consult the publication.
DOI: 10.17632/ngh58j6c6w.1
title: Supplementary files of "TMT-based quantitative proteome data of MSP1 overexpressed rice"

description: Supplementary files related to the data article "TMT-based quantitative proteome data of MSP1 overexpressed rice"
C.W. Min, J.W. Jang, G.H. Lee, G. Ravi, S.T. Kim. Data in Brief (2022).
This article reporting potential PRR candidates which may function as receptor for recognition of MSP1 in rice. This data complements the original research article published in Journal of Proteomics: C.W. Min, J.W. Jang, G.H. Lee, R. Gupta, H.J. Park, H.S. Cho, S.R. Park, S. Kwon, L. Cho, K. Jung, Y. Kim, Y. Wang, S.T. Kim, TMT-based quantitative membrane proteomics identified PRRs potentially involved in the perception of MSP1 in rice leaves, J. Proteomics 267 (2022) 104687, https://doi.org/10.1016/j.jprot.2022.104687.

Supplementary table legends
Supplementary Table 1. List of primers used in this study.
Supplementary Table 2. Identification of significantly modulated proteins in the rice leaves by TMT-based quantitative proteomic analysis.
Supplementary Table 3. MapMan analysis of whole differential proteins.
Supplementary Table 4. Functional characterization of proteins related to RLK, MAPK, calcium signaling, hormone signaling, and stress & redox using MapMan analysis.
DOI: 10.17632/4jgfwnkzb4.1
title: Data from: Nasal Glucagon Reverses Insulin-induced Hypoglycemia With Less Rebound Hyperglycemia: Pooled Analysis of Clinical Trials

description: Supplementary data for the analysis of treatment success (defined as an increase in blood glucose to ≥70 mg/dL or an increase of ≥20 mg/dL from nadir within 15 or 30 minutes after receiving glucagon) based on Ademolus Classification of Hypoglycemia.
Data are from the manuscript titled "Nasal Glucagon Reverses Insulin-induced Hypoglycemia With Less Rebound Hyperglycemia: Pooled Analysis of Clinical Trials". The article is accepted for publication by Journal of the Endocrine Society, and the supplementary data were peer reviewed by the journal as part of the review process.
DOI: 10.17632/n9kwxvxvwx.1
title: Skill Knowledge Attitude of Homestays in Terengganu, Malaysia

description: This dataset explains the competencies that include skill, knowledge, and attitude of entrepreneurs about digital marketing in the homestay industry in Terengganu, Malaysia.
DOI: 10.17632/xhh2ktks9g.3
title: Rheology dependent on the distance to the Propagating Thrust Tip – (Ultra)Mylonites and Pseudotachylytes of the Silvretta basal nappe

description: Primary data used for submitting the research article "Deformed pseudotachylytes of the Silvretta basal nappe - rheology dependent on the distance to the propagating thrust tip" is preserved and available here.
DOI: 10.17632/3s432m9gyx.1
title: Effects of soluble dietary fiber on Exercise Performance and Perception of Fatigue in Young Basketball Players

description: Eighteen healthy, male basketball players, have been divided into 2 groups, one group was supplemented with 17 g/day of soluble dietary fiber (Nutriose®), over four weeks and the other received placebo. Their morphological characteristics, neuromuscular and cardiovascular endurance, and rating of perceived exertion according to the RPE (Rating of Perceived Exertion) scale were assessed. Measurements were performed before supplementation and after 4 weeks of supplementation. Fecal samples have been taken from all participants immediately before and after the supplementation period, their total DNA extracted and sent for amplicon sequencing. This work emphasizes both the relevance of prebiotics in sports nutrition. Fiber has been a neglected dietary component of sports nutrition and in this study a statistically significant positive impact on perception of fatigue has been demonstrated, which signifies the need for more studies in this direction.


Supplementary_ANOVA: The analysis of research data processed by conventional methods of descriptive statistics: arithmetic mean and standard deviation (SD). ANOVA 2x2 was used to analyze the variables between the initial and the final measurements both within each group and between groups of basketball players (9 players in each group). Statistical software Statistica ver. 13.0 (Tulsa, OK, United States) was used for all analyses. Statistical comparisons were performed with commercially available software (GraphPad Prism v. 8.0, GraphPad Software, San Diego, CA, USA) and RPE variables were analyzed using a two-way repeated-measures analysis of variance (ANOVA) to evaluate the differences between trials. Tests of normality and assumptions were conducted, and if a significant violation was found, an appropriate adjustment to the degrees of freedom was made. For the TTE, the last time point was the subjective time to task failure. Two-tailed paired samples t-tests were used to assess the differences between pre-to-post TTE in the neuromuscular assessments. Statistical significance was declared when P&lt;0.05. Data are presented as Means ± SD in-text and tables, and as Means ± SEM in the figures, unless otherwise stated.

Supplementary Figure 1 and Supplementary Figure 2: The impact of fiber supplementation on gut microbiome was assessed through monitoring of relative taxonomic abundance in both participant groups at two time points. Time point 1, immediately before starting supplementation intervention and time point 2 immediately after 4 weeks of fiber supplementation period. 

Supplementary Dataset 1: The distribution of microbial taxa on phylum level.
DOI: 10.6084/m9.figshare.27050878
title: Industry perceptions of mass engineered timber (MET) construction: a comparison of South-East Asia with other regions

description: Mass Engineered Timber (MET) has emerged as an innovative construction material used in the creation of low-carbon buildings. However, more built examples are found in Europe and North America, with far fewer in Asia, despite its generally higher levels of construction. This research explores these trends by measuring building industry practitioners’ perceptions – their awareness, attitudes and perceived obstacles – across three regions experiencing different levels of MET adoption: Europe and North America (early adopters), Australia and New Zealand (early developing) and South-East Asia (under developed). The research develops a novel framework to understand industry perceptions of MET composed of ‘Enabling Parameters’ and ‘Decision-making Parameters’. This is used to develop a survey which was completed by 186 participants from the three regions. Results show that participants’ perceptions, knowledge and experience of MET are consistently lower in South-East Asia, than the other regions – a finding previously not identified in existing research. Protection against fire and water damage, ease of repair and maintenance, and perceived unsuitability of MET for high-rise building types are the primary concerns of practitioners in South-East Asia. This paper calls for technological advancements for taller MET and hybrid buildings, a review of building codes, provision of incentives, and education among practitioners to improve the perception and adoption of MET in South-East Asia.
DOI: 10.6084/m9.figshare.27050878.v1
title: Industry perceptions of mass engineered timber (MET) construction: a comparison of South-East Asia with other regions

description: Mass Engineered Timber (MET) has emerged as an innovative construction material used in the creation of low-carbon buildings. However, more built examples are found in Europe and North America, with far fewer in Asia, despite its generally higher levels of construction. This research explores these trends by measuring building industry practitioners’ perceptions – their awareness, attitudes and perceived obstacles – across three regions experiencing different levels of MET adoption: Europe and North America (early adopters), Australia and New Zealand (early developing) and South-East Asia (under developed). The research develops a novel framework to understand industry perceptions of MET composed of ‘Enabling Parameters’ and ‘Decision-making Parameters’. This is used to develop a survey which was completed by 186 participants from the three regions. Results show that participants’ perceptions, knowledge and experience of MET are consistently lower in South-East Asia, than the other regions – a finding previously not identified in existing research. Protection against fire and water damage, ease of repair and maintenance, and perceived unsuitability of MET for high-rise building types are the primary concerns of practitioners in South-East Asia. This paper calls for technological advancements for taller MET and hybrid buildings, a review of building codes, provision of incentives, and education among practitioners to improve the perception and adoption of MET in South-East Asia.
DOI: 10.17632/st9pkg6w7f.1
title: LDHU3_06.0950

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.6084/m9.figshare.26232409
title: A conceptual model for measuring the maturity of an Intelligent Construction Environment

description: Construction projects can be regarded as complex sociotechnical systems composed of diverse and dynamically interacting elements. Digital Transformation advancements can support construction companies in creating an environment to cope with complexity and improve performance. Nevertheless, reaching these advantages involves understanding how transformed processes should be managed and measured, such as using maturity assessment tools. The construction industry lacks maturity models encompassing the sector’s main characteristics and focusing on its production context. Therefore, this work proposes a conceptual model for measuring the maturity of an Intelligent Construction Environment from a sociotechnical perspective. Thus, first, the concept of an Intelligent Construction Environment is introduced. Then, based on two empirical studies consisting of 17 interviews and 11 days of on-site data collection, as well as an extensive literature review, 19 measurement dimensions associated with 13 principles and five maturity levels are proposed. This work’s theoretical contributions encompass an in-depth understanding of how the construction industry can be positioned in the digital transformation path from a sociotechnical perspective. Main practical contributions include the proposition of maturity measurement dimensions for an Intelligent Construction Environment, which indicates the aspects construction managers should focus on throughout the digital transformation process of the production environment.
DOI: 10.6084/m9.figshare.26232409.v1
title: A conceptual model for measuring the maturity of an Intelligent Construction Environment

description: Construction projects can be regarded as complex sociotechnical systems composed of diverse and dynamically interacting elements. Digital Transformation advancements can support construction companies in creating an environment to cope with complexity and improve performance. Nevertheless, reaching these advantages involves understanding how transformed processes should be managed and measured, such as using maturity assessment tools. The construction industry lacks maturity models encompassing the sector’s main characteristics and focusing on its production context. Therefore, this work proposes a conceptual model for measuring the maturity of an Intelligent Construction Environment from a sociotechnical perspective. Thus, first, the concept of an Intelligent Construction Environment is introduced. Then, based on two empirical studies consisting of 17 interviews and 11 days of on-site data collection, as well as an extensive literature review, 19 measurement dimensions associated with 13 principles and five maturity levels are proposed. This work’s theoretical contributions encompass an in-depth understanding of how the construction industry can be positioned in the digital transformation path from a sociotechnical perspective. Main practical contributions include the proposition of maturity measurement dimensions for an Intelligent Construction Environment, which indicates the aspects construction managers should focus on throughout the digital transformation process of the production environment.
DOI: 10.17632/8f9gfhhhp6.1
title: LDHU3_06.1000

description: Lipin; Leishmania donovani (HU3 strain)
DOI: 10.17632/m6dvnphgj5.1
title: Plasma metabolomics in spinal tuberculosis patients and healthy controls

description: This study aimed to conduct a non-targeted metabolomic analysis of plasma from patients with spinal tuberculosis (STB) to systematically elucidate the metabolomic alterations associated with STB. From January 2020 to January 2022, 30 patients with spinal tuberculosis (STBs) clinically diagnosed at the General Hospital of Ningxia Medical University and 30 age- and sex-matched healthy controls (HCs) were selected for this study. Using ultra-high performance liquid chromatography coupled with quadrupole time-of-flight mass spectrometry (UPLC-QTOF/MS) based metabolomics, we analyzed the metabolic profiles of 60 plasma samples.
DOI: 10.17632/zpc7tjfvy7.1
title: LDHU3_06.0980

description: Qb-SNARE protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/353jrwhkks.1
title: In Vitro Screening Studies on Eight Commercial Essential Oils-Derived Compounds to Identify Promising Natural Agents for the Prevention of Osteoporosis

description: The aim of this study was to evaluate the effect of eight commercially available EO-derived compounds ((R)-(+)-limonene, (S)-(−)-limonene, sabinene, carvacrol, thymol, alpha-pinene (α-pinene), beta-pinene (β-pinene), and cinnamaldehyde) on the bone formation process in vitro to select the most promising natural agents that could potentially be used in the prevention or treatment of osteoporosis. Within this study, evaluation of cytotoxicity, cell proliferation, and osteogenic differentiation was performed with the use of mouse primary calvarial preosteoblasts (MC3T3-E1). Moreover, extracellular matrix (ECM) mineralization was determined using MC3T3-E1 cells and dog adipose tissue-derived mesenchymal stem cells (ADSCs). The two highest non-toxic concentrations of each of the compounds were selected and used for testing other activities. This is a dataset related to the recently published article (Biomedicines 2023, 11(4), 1095; https://doi.org/10.3390/biomedicines11041095).
Folder: “MTT” contains the raw results of three repetitions of MTT cytotoxicity assay performed after 24 hours of culture. The results of the MTT test are expressed as OD values.
Folder: “LDH” contains the raw results of three repetitions of LDH proliferation assay performed after 24 and 72 hours of culture. The results of the LDH test are expressed as OD values.
Folder: “Osteogenic differentiation” contains the raw results of three repetitions of osteogenic markers level (type I collagen, bone alkaline phosphatase and osteocalcin) and total cellular proteins amount after 8 days and 21 days of culture. The results of the osteogenic markers and cellular proteins tests are expressed as OD values and as concentration of the compound expressed in ng/pg per ml.
Folder: “ARS” contains the raw results of three repetitions of mineral deposition assay performed after 21 days of cultures. The results of the ARS test are expressed as OD values.
Folder: “ARS staining” contains raw stereoscopic images of mineral deposits in the ECM.
DOI: 10.17632/4x96trx9tv.1
title: Microglia are dispensable for experience-dependent refinement of mouse visual circuitry

description: Source data for all figures.
Images of retinogeniculate overlap from two eyes for Fig. 2d
DOI: 10.17632/hrbnwxknrk.1
title: FeynGrav 2.0

description: FeynGrav provides a tool to operate with Feynman rules for gravity within FeynCalc.
The present version contains the interaction rules for:
*) Scalars with arbitrary mass minimally coupled to gravity;
*) Dirac fermions with arbitrary mass minimally coupled to gravity;
*) Massless vectors minimally coupled to gravity and the corresponding ghosts;
*) Vectors with non-vanishing mass minimally coupled to gravity;
*) SU(N) Yang-MIlls theory;
*) General relativity and the corresponding ghost sectors.
DOI: 10.17632/3r8kr5p5zd.1
title: Fibonacci Solar Trees: supplementary material

description: This is the supplementary material of the paper "Fibonacci solar trees", by Grassi, L. B. et al, which brings all material required to verify the results and analyses, and to reproduce the paper, in addition to the source files to build other Fibonacci solar trees according to the user's criteria, and the results of simulations and analysis of a large set of those trees. More specifically, it contains:
 1. The code for obtaining Fibonacci coordinates in Python;
 2. The models for construction of the Fibonacci tree in Rhinoceros Software and the Grasshopper plug-in, allowing one to change its constructive variables and obtain the incidence value through simulation;
 3. The code for obtaining the average annual solar incidence equation coefficients;
 4. The code for the graphs and surfaces used for analysis, developed in Matlab software;
 5. Data from simulations of the configurable Fibonacci solar tree analyzed over one year for each tree configuration (presented in an spreadsheet), as well as the estimated values, the error between the simulated and estimated incidences;
 6. The graphs and surfaces used for analysis (.eps and .png), whether to obtain the incidence equation or to compare the simulated and estimated incidences.
DOI: 10.17632/hmt9358d32.1
title: LINF_280033100

description: splicing factor 3B subunit 1; Leishmania infantum (strain JPCM5)
DOI: 10.17632/7r2cb6bxmg.1
title: LINF_280029600

description: DNA topoisomerase 2; Leishmania infantum (strain JPCM5)
DOI: 10.17632/b3cn3wkn5t.1
title: LINF_280032400

description: R3H domain containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/4d95nbngm2.1
title: LINF_280029300

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/r7mn3jxjh2.1
title: LINF_280036300

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/9rw26hnxj9.1
title: LINF_280039600

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/zt69cdkb8g.1
title: LINF_280036200

description: beta-lactamase/transpeptidase-like; Leishmania infantum (strain JPCM5)