cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9034067.v1
title: Exposure to workplace bullying, microRNAs and pain; evidence of a moderating effect of miR-30c rs928508 and miR-223 rs3848900

description: Prolonged exposure to bullying behaviors may give rise to symptoms such as anxiety, depression and chronic pain. Earlier data suggest that these symptoms often are associated with stress-induced low-grade systemic inflammation. Here, using data from both animals and humans, we examined the moderating role of microRNAs (miRNAs, miRs) in this process. In the present study, a resident-intruder paradigm, blood samples, tissue harvesting and subsequent qPCR analyses were used to screen for stress-induced changes in circulating miRNAs in rats. The negative acts questionnaire (NAQ), TaqMan assays and a numeric rating scale (NRS) for pain intensity were then used to examine the associations among bullying behaviors, relevant miRNA polymorphisms and pain in a probability sample of 996 Norwegian employees. In rats, inhibited weight gain, reduced pituitary POMC expression, adrenal Nr3c1 mRNA downregulation, as well as increased miR-146a, miR-30c and miR-223 in plasma were observed following 1 week of repeated exposure to social stress. When following up the miRNA findings from the animal study in the human working population, a stronger relationship between NAQ and NRS scores was observed in subjects with the miR-30c GG genotype (rs928508) compared to other subjects. A stronger relationship between NAQ and NRS scores was also seen in men with the miR-223 G genotype (rs3848900) as compared to other men. Our findings show that social stress may induce many physiological changes including changed expression of miRNAs. We conclude that the miR-30c GG genotype in men and women, and the miR-223 G genotype in men, amplify the association between exposure to bullying behaviors and pain.Lay summaryUsing an animal model of social stress, we identified miR-146a, miR-30c and miR-223 as potentially important gene regulatory molecules that may be involved in the stress response. Interestingly, human genotypes affecting the expression of mature miR-30c and miR-223 had a moderating effect on the association between exposure to bullying and pain. Subjects with the miR-30c rs928508 GG genotype had a significantly stronger association between exposure to bullying behaviors and pain than other subjects. The same was observed in men with the miR-223 rs3848900 G genotype, as compared to other men. Using an animal model of social stress, we identified miR-146a, miR-30c and miR-223 as potentially important gene regulatory molecules that may be involved in the stress response. Interestingly, human genotypes affecting the expression of mature miR-30c and miR-223 had a moderating effect on the association between exposure to bullying and pain. Subjects with the miR-30c rs928508 GG genotype had a significantly stronger association between exposure to bullying behaviors and pain than other subjects. The same was observed in men with the miR-223 rs3848900 G genotype, as compared to other men.
DOI: 10.17028/rd.lboro.9033998
title: Wide-angle X-ray scattering data from stretched UHMWPE samples

description: Scattered intensity (arbitrary units) versus scattering vector (in reciprocal Angstroms) data at wide angles for drawing ratios 2.5, 5, and 7.5.<br>Supplementary information for 'Ballistic thermal phonons traversing nanocrystalline domains in oriented polyethylene.'<br>Abstract:Thermally conductive polymer crystals are of both fundamental and practical interest for their high thermal conductivity that exceeds that of many metals. In particular, polyethylene fibers and oriented films with uniaxial thermal conductivity exceeding 50 Wm−1K−1 have been reported recently, stimulating interest into the underlying microscopic thermal transport processes. While ab-initio calculations have provided insight into microscopic phonon properties for perfect crystals, such properties of actual samples have remained experimentally inaccessible. Here, we report the direct observation of thermal phonons with mean free paths up to 200 nm in semicrystalline polyethylene films using transient grating spectroscopy. Many of the mean free paths substantially exceed the crystalline domain sizes measured using small-angle x-ray scattering, indicating that thermal phonons propagate ballistically within and across the nano-crystalline domains, with those transmitting across domain boundaries contributing nearly a third of the thermal conductivity. Our work provides the first direct determination of thermal phonon propagation lengths in molecular solids, providing insights into the microscopic origins of their high thermal conductivity.<br>
DOI: 10.6084/m9.figshare.9033992
title: Synthesis of novel bis- and poly(aryldiazenylthiazoles)

description: A novel series of bis- and poly(arydiazenyl)thiazoles were prepared in good yields by the reaction of the appropriate α-keto-hydrazonoyl chlorides with the corresponding bis- and poly(hydrazinecarbothioamide) in refluxing EtOH/DMF in the presence of few drops of TEA. Based on elemental analyses as well as spectral data, the structures of the new compounds were confirmed.
DOI: 10.6084/m9.figshare.9033983
title: EEG recordings and stimuli

description: Sample data to run example code generating temporal response function to word-level features in the delta band.<br>The dataset contains EEG recordings, preprocessed (band-pass filtered, rereferenced to average, and resampled at 125Hz) for all participants, as well as corresponding stimulus material.<br>The software and code can be found at:Weissbart, Hugo (2019): Example code for linguistic TRFs in delta band. figshare. Software.https://doi.org/10.6084/m9.figshare.9034481
DOI: 10.17028/rd.lboro.9033998.v2
title: Wide-angle X-ray scattering data from stretched UHMWPE samples

description: Scattered intensity (arbitrary units) versus scattering vector (in reciprocal Angstroms) data at wide angles for drawing ratios 2.5, 5, and 7.5.<br>Supplementary information for 'Ballistic thermal phonons traversing nanocrystalline domains in oriented polyethylene.'<br>Abstract:Thermally conductive polymer crystals are of both fundamental and practical interest for their high thermal conductivity that exceeds that of many metals. In particular, polyethylene fibers and oriented films with uniaxial thermal conductivity exceeding 50 Wm−1K−1 have been reported recently, stimulating interest into the underlying microscopic thermal transport processes. While ab-initio calculations have provided insight into microscopic phonon properties for perfect crystals, such properties of actual samples have remained experimentally inaccessible. Here, we report the direct observation of thermal phonons with mean free paths up to 200 nm in semicrystalline polyethylene films using transient grating spectroscopy. Many of the mean free paths substantially exceed the crystalline domain sizes measured using small-angle x-ray scattering, indicating that thermal phonons propagate ballistically within and across the nano-crystalline domains, with those transmitting across domain boundaries contributing nearly a third of the thermal conductivity. Our work provides the first direct determination of thermal phonon propagation lengths in molecular solids, providing insights into the microscopic origins of their high thermal conductivity.<br>
DOI: 10.6084/m9.figshare.9033992.v2
title: Synthesis of novel bis- and poly(aryldiazenylthiazoles)

description: A novel series of bis- and poly(arydiazenyl)thiazoles were prepared in good yields by the reaction of the appropriate α-keto-hydrazonoyl chlorides with the corresponding bis- and poly(hydrazinecarbothioamide) in refluxing EtOH/DMF in the presence of few drops of TEA. Based on elemental analyses as well as spectral data, the structures of the new compounds were confirmed.
DOI: 10.17028/rd.lboro.9033998.v1
title: Wide-angle X-ray scattering data from stretched UHMWPE samples

description: Scattered intensity (arbitrary units) versus scattering vector (in reciprocal Angstroms) data at wide angles for drawing ratios 2.5, 5, and 7.5.<br>Supplementary information for 'Ballistic thermal phonons traversing nanocrystalline domains in oriented polyethylene.'<br>Abstract:Thermally conductive polymer crystals are of both fundamental and practical interest for their high thermal conductivity that exceeds that of many metals. In particular, polyethylene fibers and oriented films with uniaxial thermal conductivity exceeding 50 Wm−1K−1 have been reported recently, stimulating interest into the underlying microscopic thermal transport processes. While ab-initio calculations have provided insight into microscopic phonon properties for perfect crystals, such properties of actual samples have remained experimentally inaccessible. Here, we report the direct observation of thermal phonons with mean free paths up to 200 nm in semicrystalline polyethylene films using transient grating spectroscopy. Many of the mean free paths substantially exceed the crystalline domain sizes measured using small-angle x-ray scattering, indicating that thermal phonons propagate ballistically within and across the nano-crystalline domains, with those transmitting across domain boundaries contributing nearly a third of the thermal conductivity. Our work provides the first direct determination of thermal phonon propagation lengths in molecular solids, providing insights into the microscopic origins of their high thermal conductivity.<br>
DOI: 10.6084/m9.figshare.9033977
title: PC9_data.zip

description: PubChemQC subset of molecules with H, C, N, O and F and up to 9 "heavy" atoms.XYZ have been structured to mimic QM9 dataset. A list of molecules with spin multiplicities &gt;1 is also provided.
DOI: 10.6084/m9.figshare.9033965
title: Liver transcriptome resources of four commercially exploited teleost species

description: The generation of omic resources is central to develop adequate management strategies for species with economic value. Here, we provide high-coverage RNA-seq datasets of liver tissue (containing between 80,2 and 88,4 million of paired-end reads) from four wildtype teleost species with high commercial value: T. trachurus (Atlantic horse mackerel), S. scombrus (Atlantic mackerel), T. luscus (pout), and M. poutassou (blue whiting). A comprehensive assembly pipeline, using de novo single and multi-kmer assembly approaches, produced 64 single high-quality liver transcriptomes – 16 per species. The final assemblies, with N50 values ranging from 2,543 – 3,700 bp and BUSCO (Benchmarking Universal Single-Copy Orthologs) completeness values between 81.8 – 86.5% of the Actinopterygii gene set, were subjected to open reading frame (ORF) prediction and functional annotation. Our study provides the first transcriptomic resources for these species and offers valuable tools to evaluate both neutral and selected genetic variation among populations, and to identify candidate genes for environmental adaptation assisting in the investigation of the effects of global changes on fisheries.<br>
DOI: 10.6084/m9.figshare.9033914
title: Data input and data sources for extended cost-effectiveness analysis of cigarette price increase in Vietnam

description: Data inputs and data sources for the article "Impact of cigarette price increase on health and financing outcomes in Vietnam"
DOI: 10.6084/m9.figshare.9033965.v1
title: The liver transcriptome of four commercial fish species - Atlantic Mackerel, Atlantic horse mackerel, Blue whiting, Pout

description: The generation of omic resources is central to develop adequate management strategies for species with economic value. Here, we provide high-coverage RNA-seq datasets of liver tissue (containing between 80,2 and 88,4 million of paired-end reads) from four wildtype teleost species with high commercial value: T. trachurus (Atlantic horse mackerel), S. scombrus (Atlantic mackerel), T. luscus (pout), and M. poutassou (blue whiting). A comprehensive assembly pipeline, using de novo single and multi-kmer assembly approaches, produced 64 single high-quality liver transcriptomes – 16 per species. The final assemblies, with N50 values ranging from 2,543 – 3,700 bp and BUSCO (Benchmarking Universal Single-Copy Orthologs) completeness values between 81.8 – 86.5% of the Actinopterygii gene set, were subjected to open reading frame (ORF) prediction and functional annotation. Our study provides the first transcriptomic resources for these species and offers valuable tools to evaluate both neutral and selected genetic variation among populations, and to identify candidate genes for environmental adaptation assisting in the investigation of the effects of global changes on fisheries.<br>
DOI: 10.6084/m9.figshare.9033965.v3
title: Liver transcriptome resources of four commercially exploited teleost species

description: The generation of omic resources is central to develop adequate management strategies for species with economic value. Here, we provide high-coverage RNA-seq datasets of liver tissue (containing between 80,2 and 88,4 million of paired-end reads) from four wildtype teleost species with high commercial value: T. trachurus (Atlantic horse mackerel), S. scombrus (Atlantic mackerel), T. luscus (pout), and M. poutassou (blue whiting). A comprehensive assembly pipeline, using de novo single and multi-kmer assembly approaches, produced 64 single high-quality liver transcriptomes – 16 per species. The final assemblies, with N50 values ranging from 2,543 – 3,700 bp and BUSCO (Benchmarking Universal Single-Copy Orthologs) completeness values between 81.8 – 86.5% of the Actinopterygii gene set, were subjected to open reading frame (ORF) prediction and functional annotation. Our study provides the first transcriptomic resources for these species and offers valuable tools to evaluate both neutral and selected genetic variation among populations, and to identify candidate genes for environmental adaptation assisting in the investigation of the effects of global changes on fisheries.<br>
DOI: 10.6084/m9.figshare.9033914.v1
title: Data input and data sources for extended cost-effectiveness analysis of cigarette price increase in Vietnam

description: Data inputs and data sources for the article "Impact of cigarette price increase on health and financing outcomes in Vietnam"
DOI: 10.6084/m9.figshare.9033965.v2
title: Liver transcriptome resources of four commercially exploited teleost species

description: The generation of omic resources is central to develop adequate management strategies for species with economic value. Here, we provide high-coverage RNA-seq datasets of liver tissue (containing between 80,2 and 88,4 million of paired-end reads) from four wildtype teleost species with high commercial value: T. trachurus (Atlantic horse mackerel), S. scombrus (Atlantic mackerel), T. luscus (pout), and M. poutassou (blue whiting). A comprehensive assembly pipeline, using de novo single and multi-kmer assembly approaches, produced 64 single high-quality liver transcriptomes – 16 per species. The final assemblies, with N50 values ranging from 2,543 – 3,700 bp and BUSCO (Benchmarking Universal Single-Copy Orthologs) completeness values between 81.8 – 86.5% of the Actinopterygii gene set, were subjected to open reading frame (ORF) prediction and functional annotation. Our study provides the first transcriptomic resources for these species and offers valuable tools to evaluate both neutral and selected genetic variation among populations, and to identify candidate genes for environmental adaptation assisting in the investigation of the effects of global changes on fisheries.<br>
DOI: 10.6084/m9.figshare.9033842
title: Dataset associated with article doi: 10.3389/fnbeh.2019.00178

description: Dataset with social reward responsiveness (Island Getaway social reward task), depressive symptoms (IDAS dysphoria scale), social anxiety symptoms (IDAS social anxiety scale), social and non-social stress (STRAIN), and residual social reward responsiveness variables associated with article doi: 10.3389/fnbeh.2019.00178
DOI: 10.6084/m9.figshare.9033842.v1
title: Dataset associated with article doi: 10.3389/fnbeh.2019.00178

description: Dataset with social reward responsiveness (Island Getaway social reward task), depressive symptoms (IDAS dysphoria scale), social anxiety symptoms (IDAS social anxiety scale), social and non-social stress (STRAIN), and residual social reward responsiveness variables associated with article doi: 10.3389/fnbeh.2019.00178
DOI: 10.6084/m9.figshare.9033761
title: Data inputs and data sources for extended cost-effectiveness analysis of cigarette price increase in Vietnam

description: Data inputs and sources of data for the article "Impact of cigarette price increase on health and financing outcomes in Vietnam"
DOI: 10.6084/m9.figshare.9033761.v1
title: Data input and data sources for extended cost-effectiveness anaylsis of cigarette price increase in Vietnam

description: Data inputs and sources of data for the article "Impact of cigarette price increase on health and financing outcomes in Vietnam"
DOI: 10.6084/m9.figshare.9032825.v1
title: SilerFrenken_OAAPC_figshare_V1.xlsx

description: Bibliographic, demographic and pricing data on journals listed by the Directory of Open Access Journals (as of Dec. 2018).
DOI: 10.6084/m9.figshare.9031751
title: Data files from Elasticity and energy dissipation in the double network hydrogel adhesive of the slug <i>Arion subfuscus</i>

description: This file contains the original data used in all the analyses, and the production of figures.
DOI: 10.6084/m9.figshare.9031751.v1
title: Data files from Elasticity and energy dissipation in the double network hydrogel adhesive of the slug <i>Arion subfuscus</i>

description: This file contains the original data used in all the analyses, and the production of figures.
DOI: 10.6084/m9.figshare.9033761.v2
title: Data inputs and data sources for extended cost-effectiveness anaylsis of cigarette price increase in Vietnam

description: Data inputs and sources of data for the article "Impact of cigarette price increase on health and financing outcomes in Vietnam"
DOI: 10.6084/m9.figshare.9033761.v4
title: Data inputs and data sources for extended cost-effectiveness analysis of cigarette price increase in Vietnam

description: Data inputs and sources of data for the article "Impact of cigarette price increase on health and financing outcomes in Vietnam"
DOI: 10.6084/m9.figshare.9033761.v3
title: Data inputs and data sources for extended cost-effectiveness analysis of cigarette price increase in Vietnam

description: Data inputs and sources of data for the article "Impact of cigarette price increase on health and financing outcomes in Vietnam"
DOI: 10.6084/m9.figshare.9031643
title: Transcript and protein sequences for the prairie rattlesnake

description: Transcript and protein sequence fasta files for the prairie rattlesnake genome
DOI: 10.6084/m9.figshare.9031481
title: Prairie rattlesnake repeat element annotation

description: Repeat element annotations for the prairie rattlesnake genome assembly.
DOI: 10.6084/m9.figshare.9031373
title: Dataset for: "T-Cycle EPR: Development at 275 GHz for the study of reaction kinetics & intermediates."

description: This dataset contains all the data used for my PhD thesis at Leiden University:- raw data (spectra, time traces)- Python files for data analysis<br>All the experimental details are mentioned in great detail in my thesis, available in the link provided.<br>
DOI: 10.6084/m9.figshare.9031370
title: Prairie rattlesnake gene annotation

description: Gene annotations for the prairie rattlesnake genome.
DOI: 10.6084/m9.figshare.9031373.v1
title: Dataset for: "T-Cycle EPR: Development at 275 GHz for the study of reaction kinetics & intermediates."

description: This dataset contains all the data used for my PhD thesis at Leiden University:- raw data (spectra, time traces)- Python files for data analysis<br>All the experimental details are mentioned in great detail in my thesis, available in the link provided.<br>
DOI: 10.6084/m9.figshare.9030782
title: Prairie rattlesnake (Crotalus viridis) genome assembly

description: The genome assembly of the prairie rattlesnake (<i>Crotalus viridis</i>).
DOI: 10.6073/pasta/6e0e677f88d787a3dae2f45afe45f56c
title: SBC LTER: Ocean: Time-series: nearshore calibrated pH and temperature outside of reefs, ongoing since 2011

description: Calibrated pH (Total scale, SeaFET sensor) data was collected from 10 reefs in the Santa Barbara Channel along with in situ temperature. Most pH sensors are deployed together with SBC long-term mooring instruments. Data collection intervals and SeaFET sensor depths vary based on the site location.
DOI: 10.15468/pg7rxp
title: Revision of Mediterranean and NE Atlantic Raphitomidae (Gastropoda, Conoidea) 8: The genus Leufroyia Monterosato, 1884

description: This dataset contains the digitized treatments in Plazi based on the original journal article Giannuzzi-Savelli, Riccardo, Pusateri, Francesco, Prkić, Jakov, Bartolini, Stefano, Russini, Valeria, Fassio, Giulia, Oliverio, Marco (2020): Revision of Mediterranean and NE Atlantic Raphitomidae (Gastropoda, Conoidea) 8: The genus Leufroyia Monterosato, 1884. Zoosystema 42 (22): 433-473, DOI: 10.5252/zoosystema2020v42a22
DOI: 10.6084/m9.figshare.9015440
title: Data, truth sets and content files used for the comparative study in "kASA: Taxonomic Analysis of Metagenomic Data on a Notebook"

description: Content files for both databases as described in the publication of kASA as well as datasets and truth sets used for the comparative analysis as sanity check which is mentioned in the first part of "Results".<br>
DOI: 10.6084/m9.figshare.9016154
title: Shareable data, code, and supplementary figures related to the establishment and calibration of a spatially-distributed, catchment-scale model of alpine snow dynamics

description: This contribution comprises i) Supplementary figures, ii) An animation of the evolution of daily Snow Water Equivalent over the hydrological year 2017-2018, and iii) All shareable (i.e. non-restricted) datasets and code pertaining to the development and calibration of a distributed snow model for a rugged catchment in the western Swiss Alps.
DOI: 10.6084/m9.figshare.9016154.v1
title: Shareable data, code, and supplementary figures related to the establishment and calibration of a spatially-distributed, catchment-scale model of alpine snow dynamics

description: This contribution comprises i) Supplementary figures, ii) An animation of the evolution of daily Snow Water Equivalent over the hydrological year 2017-2018, and iii) All shareable (i.e. non-restricted) datasets and code pertaining to the development and calibration of a distributed snow model for a rugged catchment in the western Swiss Alps.
DOI: 10.6084/m9.figshare.9015440.v1
title: Data, truth sets and content files used for the comparative study in "kASA: Taxonomic Analysis of Metagenomic Data on a Notebook"

description: Content files for both databases as described in the publication of kASA as well as datasets and truth sets used for the comparative analysis as sanity check which is mentioned in the first part of "Results".<br>