cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc28mzgc
title: CCDC 2104573: Experimental Crystal Structure Determination

description: Related Article: Alex Ketzer, Érica G. Oliveira, Sarah F. Coelho, Yuri G. Kappenberg, Felipe S. Stefanello, Nilo Zanatta, Marcos A.P. Martins, Clarissa P. Frizzo, Helio G. Bonacorso|2022|J.Mol.Struct.|1267|133617|doi:10.1016/j.molstruc.2022.133617
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bmhzg
title: CCDC 2163706: Experimental Crystal Structure Determination

description: Related Article: Hao Zhang, Zhi-Xuan Wang, Yu-Hui Luo, Feng-Yu Chen, Chun-Yuan Jia, Xue-Qi Tan, Yuan-Yuan Zhang, Dong-En Zhang|2022|Polyhedron|224|116016|doi:10.1016/j.poly.2022.116016
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.6869118
title: Parazoanthus darwini decontaminated gx

description: .
DOI: 10.5281/zenodo.6869117
title: Parazoanthus darwini decontaminated gx

description: .
DOI: 10.5281/zenodo.6869139
title: Hamster Vaping Manuscript Supplement

description: Manuscript supplemental results
DOI: 10.5281/zenodo.6869159
title: Penthetria funebris decontaminated gx

description: .
DOI: 10.5281/zenodo.6869158
title: Penthetria funebris decontaminated gx

description: .
DOI: 10.5281/zenodo.6869198
title: Pseudolaguvia tuberculatus decontaminated gx

description: .
DOI: 10.5281/zenodo.6869197
title: Pseudolaguvia tuberculatus decontaminated gx

description: .
DOI: 10.5281/zenodo.6868244
title: Mining for Framework Instantiation Pattern Interplays

description: Software frameworks define generic application blueprints which can be instantiated into an application through application-specific instantiation actions such as overriding a method or providing an object that implements an interface. In case the framework’s documentation falls short, developers may use other instantiations of the same framework as a guide to the required instantiation actions. In this paper, we propose an automated approach to mining framework instantiation patterns from existing open-source instantiations. The approach leverages a graph-based representation to capture the common ways of implementing instantiation actions as well as their interplays, so called instantiation interplays. As a case study, we mined for patterns in a set of 2,028 Java projects that instantiate four of the most popular Java frameworks. We also classify the extracted interplays according to the different contexts in which they occur. We found that our approach discovers relevant practices and interplays that are not covered by previous approaches. Our results will allow developers to have a better understanding of the frameworks they instantiate.
DOI: 10.5281/zenodo.6704307
title: Mining for Framework Instantiation Pattern Interplays

description: Software frameworks define generic application blueprints which can be instantiated into an application through application-specific instantiation actions such as overriding a method or providing an object that implements an interface. In case the framework’s documentation falls short, developers may use other instantiations of the same framework as a guide to the required instantiation actions. In this paper, we propose an automated approach to mining framework instantiation patterns from existing open-source instantiations. The approach leverages a graph-based representation to capture the common ways of implementing instantiation actions as well as their interplays, so called instantiation interplays. As a case study, we mined for patterns in a set of 2,028 Java projects that instantiate four of the most popular Java frameworks. We also classify the extracted interplays according to the different contexts in which they occur. We found that our approach discovers relevant practices and interplays that are not covered by previous approaches. Our results will allow developers to have a better understanding of the frameworks they instantiate.
DOI: 10.5066/p9fh8zjw
title: Grain-Size Data From Sediment Samples at Seven Mile Island, New Jersey and Rockaway Peninsula, New York

description: Sediment grab samples were collected from one onshore location and 32 undisturbed locations along the seafloor around Seven Mile Island, New Jersey (NJ) and Rockaway Peninsula, New York (NY). The sediment grab samples were collected in May and June of 2021 at locations within the area where multibeam bathymetry surveys were also conducted during the same trip. All sediment samples were analyzed using a laser diffraction Coulter LS13 320 particle-size analyzer to measure the grain size distribution of the sediments. All the samples within the dataset are referred to by field activity numbers (FANs) 2021-318-FA and 2021-319-FA and are part of the Coastal Sediment Availability and Flux (CSAF) research project which collects geophysical, remote sensing and sediment data to inform models for improving prediction of coastal systems' response to extreme weather and sea-level rise. For further information regarding data collection and/or processing methods refer to: Wei, E.A, and Miselis, J.L., 2022, Geologic framework, anthropogenic impacts, and hydrodynamics contribute to variable sediment availability and shoreface morphology at the Rockaway Peninsula, NY: Journal of Marine Science and Engineering, v. 10, no. 7, art. 989, https://doi.org/10.3390/jmse10070989.
DOI: 10.17638/datacat.liverpool.ac.uk/1764
title: Grizzled Skippers (Pyrgus malvae) under threat: Investigating impacts of climate and land-use change on an early successional habitat UK specialist: Supplementary Data
DOI: 10.5517/ccdc.csd.cc1zs7ll
title: CCDC 1840550: Experimental Crystal Structure Determination

description: Related Article: Neha Sareen, Krishna Kumar, Rajni Kant, Somenath Garai, Subrato Bhattacharya|2022|J.Mol.Struct.|1267|133653|doi:10.1016/j.molstruc.2022.133653
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28mmh1
title: CCDC 2104233: Experimental Crystal Structure Determination

description: Related Article: Qiao Gao, Xiao-Xue Fang, Hao-Ming Luo, Jing Yang, Zhe Lin|2022|J.Mol.Struct.|1267|133662|doi:10.1016/j.molstruc.2022.133662
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29wscc
title: CCDC 2141863: Experimental Crystal Structure Determination

description: Related Article: Neha Sareen, Krishna Kumar, Rajni Kant, Somenath Garai, Subrato Bhattacharya|2022|J.Mol.Struct.|1267|133653|doi:10.1016/j.molstruc.2022.133653
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5526/erdr-00000144
title: Enhancing performance with multisensory cues in a realistic target discrimination tasks.
DOI: 10.6084/m9.figshare.20037119
title: Latin American independent newsletter curation dataset

description: This study analyze the use of journalistic content curation in Latin American independent newsletters, using an evaluative methodology based on an analysis system composed of parameters and indicators organized along two major areas or dimensions: Content and Curation. All the newsletters (12) have been analyzed in five month. This is the dataset of the study
DOI: 10.6084/m9.figshare.20037119.v3
title: Latin American independent newsletter curation dataset

description: This study analyze the use of journalistic content curation in Latin American independent newsletters, using an evaluative methodology based on an analysis system composed of parameters and indicators organized along two major areas or dimensions: Content and Curation. All the newsletters (12) have been analyzed in five month. This is the dataset of the study
DOI: 10.6084/m9.figshare.20037119.v2
title: Latin American independent newsletter curation dataset

description: This study analyze the use of journalistic content curation in Latin American independent newsletters, using an evaluative methodology based on an analysis system composed of parameters and indicators organized along two major areas or dimensions: Content and Curation. All the newsletters (12) have been analyzed in five month. This is the dataset of the study
DOI: 10.25573/serc.20344158
title: Blinded by the bright: how species-poor habitats contribute to regional biodiversity across a tropical seascape

description: Supporting materials for: <br> L.M. Harper, <strong>J.S. Lefcheck</strong>, R. Whippo, M.S. Jones, Z. Foltz, J.E. Duffy. Blinded by the bright: how species-poor habitats contribute to regional biodiversity across a tropical seascape. <br> Including: -"Harper et al 2022.R" R script for reproducing all analyses and figures -"CBC_RLS_2015-2019_taxonomic.csv" Fish data -"RLS metadata.csv" Site coordinates -"CBC_biomass_coefs" Length-weight regression coefficients <br>
DOI: 10.25573/serc.20344158.v1
title: Blinded by the bright: how species-poor habitats contribute to regional biodiversity across a tropical seascape

description: Supporting materials for: <br> L.M. Harper, <strong>J.S. Lefcheck</strong>, R. Whippo, M.S. Jones, Z. Foltz, J.E. Duffy. Blinded by the bright: how species-poor habitats contribute to regional biodiversity across a tropical seascape. <br> Including: -"Harper et al 2022.R" R script for reproducing all analyses and figures -"CBC_RLS_2015-2019_taxonomic.csv" Fish data -"RLS metadata.csv" Site coordinates -"CBC_biomass_coefs" Length-weight regression coefficients <br>
DOI: 10.5281/zenodo.6869374
title: Time perception in human movement: Effects of Speed and Agency on Duration Estimation

description: This dataset corresponds to the publication of the same title and the following DOI: https://doi.org/10.1177/1747021820979518 The dataset contains 5 excel files whose titles correspond to the variables they contain (background variables, D-prime and C scores, duration estimation during action, duration estimation during perception, expressivity and quality ratings). In all files, descriptions of the variables can be found in the sheet titled "key", and the data can be found in the sheet titled "data".
DOI: 10.5281/zenodo.6869373
title: Time perception in human movement: Effects of Speed and Agency on Duration Estimation

description: This dataset corresponds to the publication of the same title and the following DOI: https://doi.org/10.1177/1747021820979518 The dataset contains 5 excel files whose titles correspond to the variables they contain (background variables, D-prime and C scores, duration estimation during action, duration estimation during perception, expressivity and quality ratings). In all files, descriptions of the variables can be found in the sheet titled "key", and the data can be found in the sheet titled "data".
DOI: 10.6084/m9.figshare.20344164.v1
title: ovo_chip

description: ovo_chip
DOI: 10.6084/m9.figshare.20344164.v2
title: chip

description: chip
DOI: 10.6084/m9.figshare.20344164
title: chip

description: chip
DOI: 10.6084/m9.figshare.20344164.v4
title: chip

description: chip
DOI: 10.6084/m9.figshare.20344164.v3
title: chip

description: chip
DOI: 10.6084/m9.figshare.20311758
title: 16s rDNA files and analysis for benzotriazole microcosms

description: 16s rDNA sequencing data associated with manuscript "Harnessing plant-microbiome interactions for bioremediation across a freshwater urbanization gradient" by authors AM O'Brien, ZH Yu, C Pencer, ME Frederickson, GH LeFevre, and E Passeport. Compressed archive includes annotated scripts, two README files (one each for QIIME2 calls and and R scripts), all other data in addition to 16s data, and select intermediate files. The README files document the files needed as input, and list the outputs of each script. Smaller files are also available at: https://github.com/amob/benzotriazole-microcosms
DOI: 10.6084/m9.figshare.20311758.v1
title: 16s rDNA files and analysis for benzotriazole microcosms

description: 16s rDNA sequencing data associated with manuscript "Harnessing plant-microbiome interactions for bioremediation across a freshwater urbanization gradient" by authors AM O'Brien, ZH Yu, C Pencer, ME Frederickson, GH LeFevre, and E Passeport. Compressed archive includes annotated scripts, two README files (one each for QIIME2 calls and and R scripts), all other data in addition to 16s data, and select intermediate files. The README files document the files needed as input, and list the outputs of each script. Smaller files are also available at: https://github.com/amob/benzotriazole-microcosms
DOI: 10.34740/kaggle/ds/2205074
title: CNC turning: roughness, forces and tool wear
DOI: 10.6084/m9.figshare.20043665.v4
title: AQME paper examples

description: This dataset contains example for our newly developed program AQME : Automated Quantum Mechnical Envirnments for chemical analysis. We show the utility of independent modules in multiple end-to-end examples covering both jupyter notebook and HPC computing.
DOI: 10.6084/m9.figshare.20341398
title: REDC

description: The objective of this research is to analyse and evaluate the general health of the Archives System of the State Administration in the 21st century. Starting from the bibliography and legislation immediately prior to that date, key points are selected to measure the current state of the system. The methodology used consists of the revision of the legislation, bibliography, and the technical data of archives in different censuses of the last 20 years, as well as the carrying out of an interview of our own design with the archivists. The results are shown in 10 sections or key points detected in the analysis. Finally, the conclusions analyse the aspects that have improved, which remain stagnant and which have worsened
DOI: 10.5519/qd.lw1oprsw
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (40 records)
DOI: 10.5519/qd.4jtzuh1c
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (181 records)
DOI: 10.34740/kaggle/dsv/3966214
title: mediabias
DOI: 10.5281/zenodo.6869425
title: Spizaetus ornatus decontaminated gx

description: .
DOI: 10.5281/zenodo.6869424
title: Spizaetus ornatus decontaminated gx

description: .
DOI: 10.5281/zenodo.6867613
title: dREMA-CAN-01

description: This is the dataset of the scientific report "<em>PUNTO DE REFERENCIA HISTÓRICO DE LOS RECURSOS MARISQUEROS Y DEMERSALES LITORALES DE CANARIAS</em>" (REMA-CAN-01) written by the ECOMAR research team from the Universidad de La Laguna, Tenerife, Canary Islands, Spain. IP. José Carlos Hernández
DOI: 10.5281/zenodo.6867612
title: dREMA-CAN-01

description: This is the dataset of the scientific report "<em>PUNTO DE REFERENCIA HISTÓRICO DE LOS RECURSOS MARISQUEROS Y DEMERSALES LITORALES DE CANARIAS</em>" (REMA-CAN-01) written by the ECOMAR research team from the Universidad de La Laguna, Tenerife, Canary Islands, Spain. IP. José Carlos Hernández
DOI: 10.5519/qd.vhx1qp80
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (295 records)
DOI: 10.5281/zenodo.6869469
title: Sciades troschelii decontaminated gx

description: .
DOI: 10.5281/zenodo.6869468
title: Sciades troschelii decontaminated gx

description: .
DOI: 10.5281/zenodo.6767868
title: Brazil-Offshore Wind Model

description: <strong>Installation and running the model</strong> It is necessary to install Calliope to run the model. Instructions for installation and running the model are available at:https://calliope.readthedocs.io/. <strong>Temporal resolution</strong> The temporal resolution of the model is 6 hours by default. You can set the model with another resolution in the "overrides" file: time_resampling: model.time: {function: resample, function_options: {'resolution': '6H'}} Note that running the model might be computationally expensive. The full model contains one year of data. To test the model, specify a shorter time subset in the "overrides" file &gt; weather years. For instance, over ten days of data: year_2010:<br> model.subset_time: ['2010-01-01', '2010-01-10'] <strong>Scenarios</strong> The scenario names are structured as follows: bias correction factor case + scenario name+ weather year. Example: low_baseline_2019 <em>Bias correction factor case:</em> Low: represents the 25<sup>th</sup> percentile of bias correction factor at farm level aggregated by state; Median: represents the 50<sup>th</sup> percentile of bias correction factor at farm level aggregated by state; Up: represents the 75<sup>th</sup> percentile of bias correction factor at farm level aggregated by state; <em>Scenario name</em> baseline: status quo; offshore wind farm capex reduction: capex is reduced by 10%, 30%, 50%, and 70%; natural gas prices: in gas low, the gas price is US$ 24.87, while in gas high, US$ 62.05; offshore wind farm capex reduction + natural gas price: capex reduction (10%,30%,50%, and 70%) combined with the high price of natural gas. <em>Weather year</em> Weather years include data from 2000 to 2019.
DOI: 10.5281/zenodo.6767867
title: Brazil-Offshore Wind Model

description: <strong>Installation and running the model</strong> It is necessary to install Calliope to run the model. Instructions for installation and running the model are available at:https://calliope.readthedocs.io/. <strong>Temporal resolution</strong> The temporal resolution of the model is 6 hours by default. You can set the model with another resolution in the "overrides" file: time_resampling: model.time: {function: resample, function_options: {'resolution': '6H'}} Note that running the model might be computationally expensive. The full model contains one year of data. To test the model, specify a shorter time subset in the "overrides" file &gt; weather years. For instance, over ten days of data: year_2010:<br> model.subset_time: ['2010-01-01', '2010-01-10'] <strong>Scenarios</strong> The scenario names are structured as follows: bias correction factor case + scenario name+ weather year. Example: low_baseline_2019 <em>Bias correction factor case:</em> Low: represents the 25<sup>th</sup> percentile of bias correction factor at farm level aggregated by state; Median: represents the 50<sup>th</sup> percentile of bias correction factor at farm level aggregated by state; Up: represents the 75<sup>th</sup> percentile of bias correction factor at farm level aggregated by state; <em>Scenario name</em> baseline: status quo; offshore wind farm capex reduction: capex is reduced by 10%, 30%, 50%, and 70%; natural gas prices: in gas low, the gas price is US$ 24.87, while in gas high, US$ 62.05; offshore wind farm capex reduction + natural gas price: capex reduction (10%,30%,50%, and 70%) combined with the high price of natural gas. <em>Weather year</em> Weather years include data from 2000 to 2019.
DOI: 10.5519/qd.gqr6rome
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (17 records)
DOI: 10.5519/qd.qxw6mkac
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (257 records)
DOI: 10.48490/cwtk-p051
title: AR6 SROCC Data for Figure SPM.1: Past and future changes in the ocean and cryosphere
DOI: 10.48490/vaas-8p04
title: AR6 SROCC Data for Figure SPM.3(a): Net primary production as a result of climate change
DOI: 10.48490/ys63-9451
title: AR6 SROCC Data for Figure SPM.3(b): Total animal biomass as a result of climate change
DOI: 10.6084/m9.figshare.19285469
title: Parameter_Sweep_Model_Results.xlsx

description: Results of parametric analyses performed for Goldman et al. (in prep). Spreadsheet is organized into six tabs by model configuration, in a manner similar to Figure 4 of the main manuscript. Each tab name is organized by basal boundary condition (roller or flexure), pre-stress condition (BLE or CE), temperature-dependence of the host rock Young's modulus (T-ind or T-dep), initial elastic (IE) or fully relaxed viscoelastic (VE) deformation, and the number of model configurations included (45 or 12).<br>Results include model iteration number, depth to magma chamber crest (Dc), chamber volume (Vm), aspect ratio (Rz/Rr), pressure change required for tensile failure (delP to TF), initial chamber volume (Vo), final chamber volume (Vf), absolute volume change and relative volume change (del V), rupture location (expressed in degrees from chamber mid-level, with positive indicating a counterclockwise direction), and where applicable, the corresponding panel of a figure from the main manuscript.<br>
DOI: 10.6084/m9.figshare.19285469.v1
title: Parameter_Sweep_Model_Results.xlsx

description: Results of parametric analyses performed for Goldman et al. (in prep). Spreadsheet is organized into six tabs by model configuration, in a manner similar to Figure 4 of the main manuscript. Each tab name is organized by basal boundary condition (roller or flexure), pre-stress condition (BLE or CE), temperature-dependence of the host rock Young's modulus (T-ind or T-dep), initial elastic (IE) or fully relaxed viscoelastic (VE) deformation, and the number of model configurations included (45 or 12).<br>Results include model iteration number, depth to magma chamber crest (Dc), chamber volume (Vm), aspect ratio (Rz/Rr), pressure change required for tensile failure (delP to TF), initial chamber volume (Vo), final chamber volume (Vf), absolute volume change and relative volume change (del V), rupture location (expressed in degrees from chamber mid-level, with positive indicating a counterclockwise direction), and where applicable, the corresponding panel of a figure from the main manuscript.<br>
DOI: 10.5519/qd.xoz1o614
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (29 records)
DOI: 10.5281/zenodo.6869129
title: SUMMIT's pre-calculated weight files

description: This repository includes SUMMIT's models of gene expression in whole blood for use in transcriptome-wide association studies. <strong>REFERENCES</strong> Please cite the following: Zhang, Z., Bae, Y. E., Bradley, J. R., Wu, L., & Wu, C. (2021). SUMMIT: An integrative approach for better transcriptomic data imputation improves causal gene identification. <em>medRxiv</em>.
DOI: 10.5281/zenodo.6869128
title: SUMMIT's pre-calculated weight files

description: This repository includes SUMMIT's models of gene expression in whole blood for use in transcriptome-wide association studies. <strong>REFERENCES</strong> Please cite the following: Zhang, Z., Bae, Y. E., Bradley, J. R., Wu, L., & Wu, C. (2021). SUMMIT: An integrative approach for better transcriptomic data imputation improves causal gene identification. <em>medRxiv</em>.