cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.35097/1kvgp3srcuzj1b0h
title: The interaction between particle clustering and iron particle cloud combustion in homogeneous isotropic turbulence

description: We perform carrier-phase direct numerical simulations (CP-DNS) to investigate the interaction of iron particle cloud combustion and clustering through turbulence. 
A pseudo spectral multi-phase solver in combination with a point particle iron reaction model is used, capturing mass, heat and momentum transfer between the phases. We investigate the combustion of 10 µm-sized iron particles with air, in homogeneous isotropic turbulence (HIT) at Stokes number one, varying the equivalence ratios from lean ($\phi=0.1$) to fuel-rich ($\phi=2$). At the start, the particles are homogeneously distributed with a temperature below particle ignition temperature. Particle clusters form through turbulence and ignite. While in the very lean regime ($\phi&lt;0.25$) the $\mathrm{O_2}$ diffusion through the particle boundary layer limits the conversion of $\mathrm{Fe}$ to $\mathrm{FeO}$, for $\phi&gt;0.5$, the oxygen depletion in clusters slows down the overall oxidation progress, and the conversion is limited by the transport of oxygen from regions devoid of particles into clusters. This observation from numerical simulation is supported by a time-scale analysis of the effects involved. We also quantify particle clustering through a Voronoi tessellation and show that through combustion, particle clusters become more prominent. This is caused by two effects. First, if the reacting particles are spaced closely enough to create a local lack of oxygen, a fluid flow is triggered from the regions devoid of particles into clusters. This flow carries particles into the cluster region. Second, finite-size particles cannot follow the fast thermal fluid expansion caused by the exothermic particle reaction as well as the slower compression through heat losses to colder areas.
description: The data used for the figures in the publication "The interaction between particle clustering and iron particle cloud combustion in homogeneous isotropic turbulence" is provided. It is postprocessed from the raw output of carrier-phase direct numerical simulations (CP-DNS) of iron particles combusting in a homogeneous isotropic turbulent air flow.
For each figure the data is provided in a corresponding subfolder, only Figure 3 and 6 share a folder since it consists of very similar data. 
The detailed format of the data is specific to each figure and documented in the files README.md in the corresponding subfolders.
DOI: 10.15468/dl.q766u2
title: Occurrence Download

description: A dataset containing 735 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Clutia abyssinica",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 735 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026232-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jw5kpf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Turdoides atripennis",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026235-250827131500795/datasets/export for details.
DOI: 10.15468/dl.fu53ks
title: Occurrence Download

description: A dataset containing 9820 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Gnaphalium supinum",
 "Year 1957-2022"
 ]
}

 The dataset includes 9820 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026233-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16901467
title: MAOUD

description: A multimodal acousto-optic dataset for underwater image enhancement, detection, and reconstruction.
DOI: 10.5281/zenodo.16901468
title: MAOUD

description: A multimodal acousto-optic dataset for underwater image enhancement, detection, and reconstruction.
DOI: 10.5281/zenodo.17053219
title: Training material for Galaxy tutorial "Introduction to Digital Humanities in Galaxy"

description: The datasets include two versions of the poem The Sorrows of Yamba. They have been adapted for this tutorial from versions uploaded before on Wikisource and a version restored from the Wayback Machine. The versions of the poem are in the public domain.
DOI: 10.5281/zenodo.17053220
title: Training material for Galaxy tutorial "Introduction to Digital Humanities in Galaxy"

description: The datasets include two versions of the poem The Sorrows of Yamba. They have been adapted for this tutorial from versions uploaded before on Wikisource and a version restored from the Wayback Machine. The versions of the poem are in the public domain.
DOI: 10.15468/dl.e4cx2n
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lepocinclis acus, Lepocinclis, Eunotia pectinalis, Bacillaria ulna, Haematococcus, Mesotaenium, Microspora, Neidium, Netrium, , Penium, Pleurococcus, Pseudendoclonium, , Stauroneis gracilior, , Achnanthes linearioides, Achnanthidium catenatum, Achnanthes eutrophila, Achnanthes straubiana, Frustulia copulata, Aulacoseira granulata, Vibrio paxillifer, Chroodactylon ornatum, Navicula buderi, Cyclotella pseudostelligera, Encyonema mesianum, Pseudostaurosira parasitica, , Gomphonema parvulum lagenula, Gyrosigma scalproides, Achnanthidium hungaricum, Luticola kotschyi, Navicula cryptonella, Cymbella pusilla, Nitzschia paleacea, Nitzschia sigma, Navicula umbonata, Pseudostaurosira brevistriata, Pyxidicula operculata, Nitzschia delognei, Surirella delicatissima, Fragilaria rumpens, Achnanthidium minutissimum, Pseudostaurosira subconstricta, Myriophyllum, Gomphonema gracile, Sellaphora nigri, Achnanthes catenata, Achnanthes minutissima, Achnanthidium linearioides, Achnanthidium straubianum, Amphora copulata, Aphanizomenon, Aphanizomenon flosaquae, Melosira granulata, Bacillaria paradoxa, Vibrio, Chaetomorpha, Chlorogonium, Cladophora fracta, Compsopogon, Compsopogon coeruleus, Craticula buderi, Cylindrocystis brebissonii, Cymbella minuta, Cymbella silesiaca, Desmidium, Discostella pseudostelligera, Discostella stelligera, Dolichospermum, Dolichospermum flosaquae, Dorofeyukea kotschyi, Enteromorpha, Euglena acus, Eunotia sudetica, Exilaria, Exilaria vaucheriae, Fragilaria capucina rumpens, Fragilaria construens, Fragilaria parasitica, Fragilaria tenera, Frustulia adnata, Frustulia crassinervia, Frustulia tugelae, Gonatozygon, Halamphora, Halamphora coffeaeformis, Himantidium, Himantidium exiguum, Karayevia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((31.8862 -21.3285,30.5701 -20.3186,30.5701 -24.0715,35.5909 -24.0715,35.6007 -24.0157,35.6007 -23.8125,35.4969 -23.7035,35.6007 -23.165,35.6007 -22.9702,35.227 -22.2482,34.6862 -21.6944,34.013 -21.3095,33.5 -21.1593,32.9675 -21.1092,32.4352 -21.1612,31.8862 -21.3285))"
 ]
}

 The dataset includes 22 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026236-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9c43vw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cleptornis marchei",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026237-250827131500795/datasets/export for details.
DOI: 10.15468/dl.nnq363
title: Occurrence Download

description: A dataset containing 56075 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Tetraonid line transect surveys from Norway: Data from Fjellstyrene"
 ]
}

 The dataset includes 56075 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026202-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17054660
title: Spatially-distributed SAR backscatter animations for Alaska glaciers (J through N)
DOI: 10.15468/dl.xrjbkt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Enteromius petchkovskyi)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026238-250827131500795/datasets/export for details.
DOI: 10.5284/1135564
title: Digital Archive from an Archaeological Excavation at Fen End, Over, Cambridgeshire, August to October 2019

description: This collection consists of images, spreadsheets, databases, site record data, a report and a vector graphic from an archaeological excavation by Oxford Archaeology East. Work occurred at Fen End, Over, Cambridgeshire, between August and October 2019.This revealed several phases of activity spanning the prehistoric/Roman period through to the post-medieval period, with a focus during the 11th to 14th centuries when a series of boundaries and related features associated with three properties/tofts was established.
DOI: 10.25574/cdc.456
title: Chandra X-ray Observatory Chandra Data Collection for request #456

description: Chandra Data Collection for request #456
DOI: 10.15468/dl.yk4pnn
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Peniocereus serpentinus",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 22 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026240-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t5w93c
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Peniocereus serpentinus",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026241-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hw5b3q
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "TaxonKey is Piscidia carthagenensis"
 ]
}

 The dataset includes 101 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026239-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fhbc3k
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Peniocereus serpentinus",
 "Country is Zambia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026242-250827131500795/datasets/export for details.
DOI: 10.5281/zenodo.17036457
title: Supplementary research data for "Electronic Complexity of Active Site Models for FeNC Catalysts: a Systematic Study of Truncation Effects in Molecular and Periodic Models" (J. Phys. Chem. C)

description: Supplementary data for the paper "Electronic Complexity of Active Site Models for FeNC Catalysts: a Systematic Study of Truncation Effects in Molecular and Periodic Models" published in the Journal of Physical Chemistry C. These files include, as discussed in the main text of the paper and the Supporting Information: Structural data of molecular models as.xyz-files, exemplary ORCA input files for calculations on molecular models as .inp files and files needed to reproduce the VASP and FHI calculations.

In detail, the following information is given:

Coordinate files for molecular models. The coordinate files used for calculations with molecular models are given in the .xyz format in the folder "Molecular geometries". The files are named according to the following convention:{model type A/B}(-{axial ligand Cl/2-MeHIm}) s{size 1-5} c{charge}m{2S+1} {state} {ORCA version}.xyzFor structures without axial ligands, the states are named following the "Systematic Investigation of Electronic Structures" section in the main text. For structures with the axial ligands Cl– or 2-MeHIm, low-spin (LS), intermediate-spin (IS) and high-spin (HS) are differentiated, and additionally ring-open-shell high-spin states (ROS) or intramolecular-redox states (IR) are given, if the structures differ strongly from the "true" high-spin state.

Template input files for molecular calculations. Template ORCA input files for molecular calculations are given in the .inp format in the folder "Molecular input files". The files are named according to the following convention:{calculation type}-{ORCA version}.inpWithin the input files, angle brackets ("<" and ">") are used to indicate placeholders for the names of orbital input files (.gbw), geometry files (.xyz), or charge and multiplicity of the model investigated.

VASP input/output files. All input/output files needed to reproduce the results for periodic models created with VASP are given in the folder "VASP input output data". The use of these files and the folder substructure is explained in the file "README.txt".

FHI input files. All input files needed to reproduce the results for periodic models created with FHI are given in the folder "FHI input data". The use of these files and the folder substructure is explained in the file "README.txt".
DOI: 10.5281/zenodo.17036458
title: Supplementary research data for "Electronic Complexity of Active Site Models for FeNC Catalysts: a Systematic Study of Truncation Effects in Molecular and Periodic Models" (J. Phys. Chem. C)

description: Supplementary data for the paper "Electronic Complexity of Active Site Models for FeNC Catalysts: a Systematic Study of Truncation Effects in Molecular and Periodic Models" published in the Journal of Physical Chemistry C. These files include, as discussed in the main text of the paper and the Supporting Information: Structural data of molecular models as.xyz-files, exemplary ORCA input files for calculations on molecular models as .inp files and files needed to reproduce the VASP and FHI calculations.

In detail, the following information is given:

Coordinate files for molecular models. The coordinate files used for calculations with molecular models are given in the .xyz format in the folder "Molecular geometries". The files are named according to the following convention:{model type A/B}(-{axial ligand Cl/2-MeHIm}) s{size 1-5} c{charge}m{2S+1} {state} {ORCA version}.xyzFor structures without axial ligands, the states are named following the "Systematic Investigation of Electronic Structures" section in the main text. For structures with the axial ligands Cl– or 2-MeHIm, low-spin (LS), intermediate-spin (IS) and high-spin (HS) are differentiated, and additionally ring-open-shell high-spin states (ROS) or intramolecular-redox states (IR) are given, if the structures differ strongly from the "true" high-spin state.

Template input files for molecular calculations. Template ORCA input files for molecular calculations are given in the .inp format in the folder "Molecular input files". The files are named according to the following convention:{calculation type}-{ORCA version}.inpWithin the input files, angle brackets ("<" and ">") are used to indicate placeholders for the names of orbital input files (.gbw), geometry files (.xyz), or charge and multiplicity of the model investigated.

VASP input/output files. All input/output files needed to reproduce the results for periodic models created with VASP are given in the folder "VASP input output data". The use of these files and the folder substructure is explained in the file "README.txt".

FHI input files. All input files needed to reproduce the results for periodic models created with FHI are given in the folder "FHI input data". The use of these files and the folder substructure is explained in the file "README.txt".
DOI: 10.15468/dl.9cx654
title: Occurrence Download

description: A dataset containing 166154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Festuca arundinacea",
 "Year 1957-2022"
 ]
}

 The dataset includes 166154 records from 997 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026180-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bhrgpp
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Clutia kilimandscharica",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 39 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026244-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2mv9e5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Turdoides gilberti",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026245-250827131500795/datasets/export for details.
DOI: 10.15468/dl.e6z4pr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cobitis squataeniatus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026248-250827131500795/datasets/export for details.
DOI: 10.15468/dl.994sdd
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apalopteron familiare",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026247-250827131500795/datasets/export for details.
DOI: 10.5281/zenodo.16945709
title: MESA inlists and extra evolution code for "Can the Anomalous Magnetic Braking of Ap/Bp Stars Explain the Orbital Decay of Algol-type Binaries?"

description: This repository contains the MESA inlists and extra evolution code that are used in the article "Can the Anomalous Magnetic Braking of Ap/Bp Stars Explain the Orbital Decay of Algol-type Binaries?", which has been accepted by ApJ. 

Algol-type binaries are semi-detached binary systems, where a less massiver Roche lobe-filling K/F-type giant/subgiant transfers material to a more massive hotter A/B-type main-sequence companion through Roche lobe overflow. According to conservative mass transfer model, the orbits of Algol binaries are expected to continuously expand. However, observations have revealed that several Algol binaries undergo rapid orbital decay. In this study, we explore whether anomalous magnetic braking (MB) can account for the observed orbital decay.

 

The uploaded zip file AMB contains the simulation codes and settings related to anomalous MB. The main input files are:





inlist_project, which specifies the binary parameters and evolution settings, such as the masses of the donor and accretor stars, the orbital period, and the mass-transfer scheme;




inlist1, which specifies the metallicity and stellar-wind scheme of the donor star;




inlist2, which specifies the metallicity of the accretor star.



The source code modification is located in the src folder as run_binary_extra.f, where we added a subroutine an_jdot_mb to implement the angular momentum loss driven by anomalous MB. All simulations were carried out with MESA version r24.08.1.

 

To reproduce the results presented in the paper, replace the corresponding files in mesa-24.08.1/binary/work with those provided here, adjust the initial conditions to match those described in the article, and then recompile and run MESA.
DOI: 10.5281/zenodo.16945710
title: MESA inlists and extra evolution code for "Can the Anomalous Magnetic Braking of Ap/Bp Stars Explain the Orbital Decay of Algol-type Binaries?"

description: This repository contains the MESA inlists and extra evolution code that are used in the article "Can the Anomalous Magnetic Braking of Ap/Bp Stars Explain the Orbital Decay of Algol-type Binaries?", which has been accepted by ApJ. 

Algol-type binaries are semi-detached binary systems, where a less massiver Roche lobe-filling K/F-type giant/subgiant transfers material to a more massive hotter A/B-type main-sequence companion through Roche lobe overflow. According to conservative mass transfer model, the orbits of Algol binaries are expected to continuously expand. However, observations have revealed that several Algol binaries undergo rapid orbital decay. In this study, we explore whether anomalous magnetic braking (MB) can account for the observed orbital decay.

 

The uploaded zip file AMB contains the simulation codes and settings related to anomalous MB. The main input files are:





inlist_project, which specifies the binary parameters and evolution settings, such as the masses of the donor and accretor stars, the orbital period, and the mass-transfer scheme;




inlist1, which specifies the metallicity and stellar-wind scheme of the donor star;




inlist2, which specifies the metallicity of the accretor star.



The source code modification is located in the src folder as run_binary_extra.f, where we added a subroutine an_jdot_mb to implement the angular momentum loss driven by anomalous MB. All simulations were carried out with MESA version r24.08.1.

 

To reproduce the results presented in the paper, replace the corresponding files in mesa-24.08.1/binary/work with those provided here, adjust the initial conditions to match those described in the article, and then recompile and run MESA.