cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7910/dvn/at7sd8
title: A Multi-Condition Replay and Channel-Based Speech Spoofing Dataset Across 15 Bangladeshi Regions with Regional Accent Variability

description: This dataset contains a large-scale speech spoofing corpus collected from speakers across 14 districts and the Sandwip Upazila of Bangladesh, capturing regional accent variability. The dataset includes both genuine and spoofed speech recorded under five real-world attack conditions: Monster, Monster–Telephone, Telephone, Robot, and Radio. Spoofed samples were generated through physical replay devices and communication channels, preserving realistic channel- and device-induced distortions.
The audio files are organized into multiple subsets, including raw recordings, class-wise real vs. spoof partitions, and predefined training, validation, and testing splits. All recordings underwent quality control and preprocessing steps, including resampling, silence removal, and amplitude normalization. Due to file size constraints, the dataset is released as multiple compressed archives, each corresponding to specific spoofing scenarios and dataset splits. This dataset is intended to support research on speech anti-spoofing, replay attack detection, channel-aware speaker verification, and robustness evaluation of deep learning–based voice biometric systems.
DOI: 10.5061/dryad.z08kprrgf
title: The role of diversity, body size and climate in dung removal: a correlative and experimental approach

description: The mechanisms by which climatic changes influence ecosystem functions,
 i.e. by a direct climatic control of ecosystem processes or by modifying
 richness and trait compositions of species communities, remain unresolved.
 This study is a contribution to this discourse by elucidating the linkages
 between climate, land use, biodiversity, body size and ecosystem
 functions. We disentangled direct climatic from biodiversity-mediated
 effects by using dung removal by dung beetles as a model system and by
 combining correlative field data and exclosure experiments along an
 extensive elevational gradient on Mt. Kilimanjaro, Tanzania. Dung removal
 declined with increasing elevation, being associated with a strong
 reduction in the richness and body size traits of dung beetle communities.
 Climate influenced dung removal rates by modifying biodiversity rather
 than by direct effects. The biodiversity-ecosystem effect was driven by a
 change in the mean body size of dung beetles. Dung removal rates were
 strongly reduced when large dung beetles were experimentally excluded.
 This study underscores that climate influences ecosystem functions mainly
 by modifying biodiversity and underpins the important role of body size
 for dung removal.
DOI: 10.5061/dryad.zs7h44jcw
title: Source Data for Crowdsourcing Bridge Dynamic Monitoring with Smartphone Vehicle Trips

description: This data accompanies the study "Crowdsourcing Bridge Dynamic
 Monitoring with Smartphone Vehicle Trips" published in (Nature)
 Communications Engineering. This paper focuses on using large and
 inexpsensive datasets for obtaining information on the dynamics of
 bridges. In this study, data is collected by smartphones in moving
 vehicles as the cross over a bridge, in three distinct applications.
 Smartphone data was collected in controlled field experiments and
 uncontrolled Uber rides on a long-span suspension bridge in the USA (The
 Golden Gate Bridge) and an analytical method was developed to accurately
 recover modal properties. The method was also successfully applied to
 partially-controlled crowdsourced data collected on a short-span highway
 bridge in Italy. The results suggest that larve and inexpensive datasets
 collected by smartphones could play a role in monitoring the health of
 existing transportation infrastructure. The data provided includes the
 source data for the figures in the publication as well as the
 "controlled data" referenced in the study.
description: All data were recorded by an iPhone 5 and iPhone 6 using the
 Sensor Play App. Two-hundred and four datasets (102 per phone) were
 collected during vehicle trips over the Golden Gate Bridge in morning and
 afternoon rush-hour periods over five days (June 18 - 22, 2017). The
 positions and orientations of the phones were fixed during data
 collection. The operator manually hit "record" on each phones at
 the approach of the bridge and hit "stop" at the end of the
 bridge -- the data is not syncrhonized. Two sedan-style
 vehicles were used and five target speeds were defined: 32, 40, 48, 56,
 and 64 km/hr (note the speed limit on the bridge is 72 km/hr). Datasets
 1-50 were collected by a Nissan sedan, and datasets 51-102 were collected
 by a Ford sedan. Each dataset is provided as a CSV file
 with twenty-four channels of raw data including timestamps, the default
 output for the Sensor Play App: 
 Accelerometer: X, Y, Z Gyroscope: X, Y,
 Z Attitude: Roll, Pitch, Yaw
 Location: Longitude, Latitude, Speed, TrueHeading,
 Altitude Motion Activity: Type &
 Confidence Barometer: Pressure, Relative
 Altitude Magnetometer: µT X, Y, Z, calibrated
 x,y,z,  The referenced study
 "Crowdsourcing Bridge Dynamic Monitoring with Smartphone Vehicle
 Trips" only analyzed vertical acceleration (acceleration in the
 Z-direction) and GPS lat-long channels, which were sampled at 100 Hz and 1
 Hz, respectively. Further details of the data and
 analysis are available in the Methods section of "Crowdsourcing
 Bridge Dynamic Monitoring with Smartphone Vehicle Trips".
 Source data is provided for figures 2, 3, 4, 5, and 7 in the Main
 Text of "Crowdsourcing Bridge Dynamic Monitoring with Smartphone
 Vehicle Trips" and figures S1, S2, and S3 of the Supplementary
 Material
description: XLS, XLSX, and CSV files
DOI: 10.5061/dryad.rxwdbrvc8
title: Survey of winter bird communities and vegetation in the Oregon Coast Range

description: We re-surveyed forest bird communities during winter in seven
 large plots originally surveyed by graduate student, Stanley Anderson,
 from 1968 through 1970, near Corvallis, Oregon, USA. The forests in
 plots in the Coast Range Mountain
 foothills were and are currently dominated by Douglas-fir
 (Pseudotsuga menziesii). Anderson's thesis included plot locations,
 summaries of vegetation characteristics and point estimates of bird
 densities for each plot. Because of the lack of similar data, we
 re-surveyed his plots after aligning methods with his and added
 modern components (distance and time interval sampling) to
 facilitate comparisons of changes in abundances. We preserved
 more extensive metadata than were preserved from Anderson's surveys,
 including georeferenced point count survey locations to
 facilitate more precisely repeatable future re-surveys. We also
 measured vegetation characteristics to compare structural changes since
 Anderson's measurements.
description: Data were collected with 10 minute stationary counts conducted
 during winter from 2019-2022. Counts included either two five-minute
 intervals or ten 1-minute intervals where each bird was noted as detected
 or not detected. Distances to birds were also estimated. Two observers
 counted each plot in each year, with minor exceptions. Vegetation was
 measured within circular plots following methods of James and Shugart
 (1970; Audubon Field Notes). Details in README files for bird surveys and
 vegetation surveys. The raw data are archived herein.
description: README files saved as .txt and Spreadsheets saved as .csv.
DOI: 10.5061/dryad.m0cfxpp6q
title: Poison frog dietary preference depends on prey type and alkaloid load

description: The ability to acquire chemical defenses through the diet has evolved
 across several major taxa. Chemically defended organisms may need to
 balance chemical defense acquisition and nutritional quality of prey
 items. However, these dietary preferences and potential trade-offs are
 rarely considered in the framework of diet-derived defenses. Poison frogs
 (Family Dendrobatidae) acquire defensive alkaloids from their arthropod
 diet of ants and mites, although their dietary preferences have never been
 investigated. We conducted prey preference assays with the Dyeing Poison
 frog (Dendrobates tinctorius) to test the hypothesis that alkaloid load
 and prey traits influence frog dietary preferences. We tested size
 preferences (big versus small) within each of four prey groups (ants,
 beetles, flies, and fly larvae) and found that frogs preferred interacting
 with smaller prey items of the fly and beetle groups. Frog taxonomic prey
 preferences were also tested as we experimentally increased their chemical
 defense load by feeding frogs decahydroquinoline, an alkaloid compound
 similar to those naturally found in their diet. Contrary to our
 expectations, overall preferences did not change during alkaloid
 consumption, as frogs across groups preferred fly larvae over other prey.
 Finally, we assessed the protein and lipid content of prey items and found
 that small ants have the highest lipid content while large fly larvae have
 the highest protein content. Our results suggest that consideration of
 toxicity and prey nutritional value are important factors in understanding
 the evolution of acquired chemical defenses and niche partitioning as a
 whole.
description: All behavioral data were collected using a GoPro camera, and then
 analyzed in Boris behavioral software.<br><br>Lipid data from
 all arthropod groups were collected via ether-soluble lipid extraction.
 The differences between lipid-containing and lipid-free weight (post
 extraction) were converted to proportions in order to calculate an
 approximation of organismal lipid percentage.<br><br>Protein
 data from all arthropod groups were collected via a protein extraction and
 Bradford assay, which was done using a plate reader. These numbers were
 standardized by dividing sample weight in order to calculate an
 approximation of micrograms of protein per milliliter.
 Alkaloid data from frogs was collected by using an electronic
 pulse stimulator on the ventral skin of live frogs for 30s. Skin
 secretions were wiped with a lint-free cloth and stored in methanol. These
 methanol alkaloid extracts were run using liquid
 chromatography/mass-spectrometry. Raw files can be opened using the
 software XCalibur. MSConvert was used to generate mzML files, a
 vendor-neutral, non-proprietary format.
description: Microsoft Excel can open the spreadsheets (.xlsx).
 Many programs can open .csv files, like Microsoft
 Excel. Mass spectrometry files can be opened with
 XCalibur (.raw files) or a program that can open XML files
 (.mzML).
DOI: 10.5061/dryad.xpnvx0kjj
title: Laboratory value changes under dabrafenib and trametinib treatement of malignant melanoma with respect to pyrexia

description: Pyrexia is a frequent adverse event of BRAF/MEK-inhibitor combination
 therapy in patients with metastasized malignant melanoma (MM). The
 study's objective was to identify laboratory changes which might
 correlate with the appearance of pyrexia. Graphical visualization of time
 series of laboratory values suggested that a rise in C-reactive-protein,
 in parallel with a fall of leukocytes and thrombocytes, were indicative of
 pyrexia. Additionally, statistical analysis showed a significant
 correlation between lactate dehydrogenase (LDH) and pyrexia. An algorithm
 based on these observations was designed using a deductive and heuristic
 approach in order to calculate a pyrexia score (PS) for each laboratory
 assessment in treated patients. The supplied data provides anonymized and
 normalized values for CRP, LDH, leukocyte and thrombocyte numbers and the
 respective pyrexia score of 44 patients without pyrexia and with pyrexia
 under dabrafenib plus trametiniob treatment. Pyrexia scores based on the
 four parameters  were statistically significantly higher in
 pyrexia patients, differentiated between groups and showed a significant
 predictive value for the diagnosis of pyrexia.
description: Data was collected retrospectively and has been anonymized. All
 indirect identifiers were removed and data collection time was only
 referred to as relative time from treatment start.
 Laboratory values have been normalized and resulting values have
 been rounded for further anonymization.
description: Data can be viewed and modified using EXCEL. The proposed
 algorthm has been translated into an excel-calculation.
DOI: 10.5281/zenodo.18400134
title: Dataset for: Two-photon interference between mutually-detuned resonance fluorescence signals scattered off a semiconductor quantum dot

description: These data files have been used to produce the figures of the manuscript: "Two-photon interference between mutually-detuned resonance fluorescence signals scattered off a semiconductor quantum dot". The statistics include Fig.1ab, Fig.2a-f, Fig.4ab, Fig.5, Fig.7, Fig.8, Fig.9, Fig.10a-d, and Fig.11b.
DOI: 10.5281/zenodo.18400133
title: Dataset for: Two-photon interference between mutually-detuned resonance fluorescence signals scattered off a semiconductor quantum dot

description: These data files have been used to produce the figures of the manuscript: "Two-photon interference between mutually-detuned resonance fluorescence signals scattered off a semiconductor quantum dot". The statistics include Fig.1ab, Fig.2a-f, Fig.4ab, Fig.5, Fig.7, Fig.8, Fig.9, Fig.10a-d, and Fig.11b.
DOI: 10.60686/t-fsd3717
title: FSD3717 Finnish Self-Report Delinquency Study 2020
DOI: 10.5061/dryad.kh189328m
title: Resource availability, competition, and the web structure of western black widows

description: This dataset originates from an experiment using black widow spiders
 (Latrodectus hesperus) originally collected from Davis, California,
 United-States and brought to the University of Arizona, where they were
 maintained under laboratory condition for 12 months. Spiders were then
 transferred to Pierre-Olivier Montiglio's laboratory in Montreal in
 Canada, where they were kept for a month prior to the experiment. During
 this time, spiders were housed in individual plastic containers (946 ml)
 at 23˚C ± 1.50 and 25 % humidity ± 8.94 with a photoperiod of 12h, and fed
 a single live house cricket (Acheta domesticus) every two weeks. Spiders
 were then fed for 8 weeks either a cricket every three weeks (Restricted
 treatment), a cricket every two weeks (Intermediate treatment), or a
 cricket every week (Ad libitum treatment) for 8 weeks. Each spider
 experienced each of the three food treatments in an order that was
 randomly determined. At the end of each 8-week food treatment, spiders
 were left to weave a web for a week in an individual standardized
 cardboard frame (31 x 17 x 24 cm). For each session of web construction,
 we monitored the structure of the web (i.e., proportion of structural
 threads over trap threads), body weight loss, and web weight. See Toupin
 et al. 2022 in Behavioral Ecology for further information on the data and
 the experiment. The experiment was designed and conducted by
 Louis-Philippe Toupin and Pierre-Olivier Montiglio. The data were
 organized and formatted for Dryad by Pierre-Olivier Montiglio.
description: Script is intended for R. All files are useable with any text
 editor.
DOI: 10.5061/dryad.h18931zpw
title: Genomic insights into rapid speciation within the world’s largest tree genus Syzygium

description: Species radiations, despite immense phenotypic variation, can be difficult
 to resolve phylogenetically when genetic change poorly matches the
 rapidity of diversification. Genomic potential furnished by
 palaeopolyploidy, and relative roles for adaptation, random drift and
 hybridisation in the apportionment of genetic variation, remain poorly
 understood factors. Here, we study these aspects in a model radiation,
 Syzygium, the most species-rich tree genus worldwide. Genomes of 182
 distinct species and 58 unidentified taxa are compared against a
 chromosome-level reference genome of the sea apple, Syzygium grande. We
 show that while Syzygium shares an ancient genome doubling event with
 other Myrtales, little evidence exists for recent polyploidy events.
 Phylogenomics confirms that Syzygium originated in Australia-New Guinea
 and diversified in multiple migrations, eastward to the Pacific and
 westward to India and Africa, in bursts of speciation visible as poorly
 resolved branches on phylogenies. Furthermore, some sublineages
 demonstrate genomic clines that recapitulate cladogenetic events,
 suggesting that stepwise geographic speciation, a neutral process, has
 been important in Syzygium diversification.
description: We sequenced the <em>Syzygium</em> grande genome
 using Oxford Nanopore long reads and sampled and Illumina-sequenced 292
 additional accessions (including 289 <em>Syzygium</em> and 3
 outgroup taxa) to understand evolutionary relationships within the genus
 <em>Syzygium</em>. We sequenced and
 assembled the <em>Syzygium grande</em> genome from a single
 individual and obtained RNAseq data from the same plant for gene
 annotation purposes. <em>Syzygium</em> and outgroup samples
 were selected for study based on special consideration to the broad range
 of the genus in terms of morphology, geography, habitat and
 phylogeny. <em>Syzygium</em> and outgroup
 samples were selected for study based on availability of material and
 special consideration to the broad range of the genus in terms of
 morphology, geography, habitat, and phylogeny.
 High-molecular weight DNA was obtained from flash-frozen mature
 leaves and RNA from various tissues (young twig, leaf early development
 and leaf late development). DNA of resequenced samples was obtained from
 mature leaves gathered in the field and preserved in silica gel
 granules. Samples were collected in Singapore, Africa
 (Angola and Congo), Australia (Northern Territory and Queensland), Brunei,
 Fiji (Viti Levu), Indonesia (Java, Papua, Papua Barat, Sulawesi and
 Sumbawa), Japan (Okinawa and Tokyo), Malaysia (Peninsular Malaysia, Sabah
 and Sarawak), New Caledonia, Sri Lanka, Thailand (Prachin Buri Province),
 and Vietnam (Lam Dong Province).
description: Text editor, Microsoft Office, FigTree, Linux operating system
 for .gz files
DOI: 10.15468/dl.k6mzhz
title: Occurrence Download

description: A dataset containing 18047 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Nordic Genetic Resources",
 "Country is Sweden"
 ]
}

 The dataset includes 18047 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003194-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.xsj3tx9jr
title: Do alternative resources dampen functional responses of native but not alien gammarids?

description: While aquatic invasive predators are among the most impactful trophic
 groups, we lack understanding of whether alternative food resources
 mediate adverse predatory effects and stabilise native prey communities.
 Here, we use comparative functional responses to examine the influence of
 alternative food resources (Fucus sp.) on predator-prey interaction
 strengths from three gammarid crustaceans, with one native (Gammarus
 locusta) and two existing and emerging invasive (Gammarus tigrinus,
 Pontogammarus maeoticus, respectively) species, towards larval chironomid
 prey. All gammarids exhibited Type II functional responses, irrespective
 of the presence of alternative seaweed disks. Fucus sp. disks
 significantly reduced predation rates overall, however, significant
 reductions in maximum feeding rates (i.e. functional response magnitudes)
 were only evident in the native species and not for the two invaders. Our
 results thus may suggest that alternative resources dampen the predatory
 interaction strength of native but not invasive alien species, concerning
 these three study organisms. This potentially exacerbates impacts of
 invasive predators relative to natives in diverse communities. Studies
 should increasingly consider alternative resources when quantifying
 ecological impacts of current and future invasive alien species compared
 to natives.
DOI: 10.15468/dl.xp3h9d
title: Occurrence Download

description: A dataset listing the 2564 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((105.76143 18.58658,105.56143 18.56658,105.38143 18.50658,105.26143 18.40658,105.21143 18.27658,105.21143 18.13658,105.21143 17.99658,105.26143 17.86658,105.38143 17.76658,105.56143 17.70658,105.76143 17.68658,105.96143 17.70658,106.14143 17.76658,106.26143 17.86658,106.31143 17.99658,106.31143 18.13658,106.31143 18.27658,106.26143 18.40658,106.14143 18.50658,105.96143 18.56658,105.76143 18.58658))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 2564 records were derived from 131 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003191-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.37pvmcvpb
title: A novel neo-sex chromosome in Sylvietta brachyura (Macrosphenidae) adds to the extraordinary avian sex chromosome diversity among Sylvioidea songbirds

description: We report the discovery of a novel neo-sex chromosome in an African
 warbler, Sylvietta brachyura (northern crombec; Macrosphenidae). This
 species is part of the Sylvioidea superfamily, where four separate
 autosome–sex chromosome translocation events have previously been
 discovered via comparative genomics of 11 of the 22 families in this
 clade. Our discovery here resulted from analyses of genomic data of
 single-species representatives from three additional Sylvioidea families
 (Macrosphenidae, Pycnonotidae, and Leiothrichidae). In all three species,
 we confirmed the translocation of a part of chromosome 4A to the sex
 chromosomes, which originated basally in Sylvioidea. In S. brachyura, we
 found that a part of chromosome 8 has been translocated to the sex
 chromosomes, forming a unique neo-sex chromosome in this lineage.
 Furthermore, the non-recombining part of 4A in S. brachyura is smaller
 than in other Sylvioidea species which suggests that recombination
 continued along this region after the fusion event in the Sylvioidea
 ancestor. These findings reveal additional sex chromosome diversity among
 the Sylvioidea, where five separate translocation events are now
 confirmed.
description: <strong>Dataset
 content:</strong> 1.
 config_files.zip: Configuration files that were used to run the pipeline
 findZX (Sigeman et al. 2022; https://doi.org/10.1186/s12864-022-08432-9) on our three study species (<em>Argya altirostris</em>, <em>Pycnonotus barbatus</em>, and <em>Sylvietta brachyura</em>). Instructions on how to install and run findZX are on the GitHub page (https://github.com/hsigeman/findZX). Command-line instructions for how to replicate the results in this paper are in the Supplementary Information. 2. findZX_results.zip: Output tables and plots from the findZX analyses of <em>Argya altirostris</em>, <em>Pycnonotus barbatus</em>, and <em>Sylvietta brachyura</em>.
DOI: 10.15468/dl.wdn9rv
title: Occurrence Download

description: A dataset containing 22401 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Vascular Plant Herbarium, UiB",
 "Country is Sweden"
 ]
}

 The dataset includes 22401 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003192-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.