cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/7kfrp6gzn6
title: Draft Genome Assembly of the Elite Tunisian Date Palm Cultivar Deglet Nour

description: The date palm (Phoenix dactylifera L.) is a key crop in the arid regions of North Africa and the Middle East, with substantial socioeconomic value. Although multiple genome assemblies have been generated using Next Generation Sequencing (NGS) technologies, they primarily focus on Middle Eastern cultivars, leaving North African varieties un-represented. This study aims to address this gap by sequencing and assembling the first genome of a North African date palm using Illumina sequencing technology. We present a draft genome assembly of the elite Tunisian variety Deglet Nour. By comparing it with the Barhee BC4 reference genome, we identified key genetic variants, including single nucleotide polymorphisms (SNPs) and insertions/deletions (INDELs), potentially associ-ated with ripening processes and fruit quality. This work expands the genomic resources for date palm research, particularly for North African cultivars, and provides new insights into the nucleotide-level variability of genes linked to key agronomic traits.
DOI: 10.3535/4w0-xbr-w9s
title: Physocypria Vávra, 1897

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/byq-abq-cky
title: Heterocypris Claus, 1892

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17632/7kfrp6gzn6.1
title: Draft Genome Assembly of the Elite Tunisian Date Palm Cultivar Deglet Nour

description: The date palm (Phoenix dactylifera L.) is a key crop in the arid regions of North Africa and the Middle East, with substantial socioeconomic value. Although multiple genome assemblies have been generated using Next Generation Sequencing (NGS) technologies, they primarily focus on Middle Eastern cultivars, leaving North African varieties un-represented. This study aims to address this gap by sequencing and assembling the first genome of a North African date palm using Illumina sequencing technology. We present a draft genome assembly of the elite Tunisian variety Deglet Nour. By comparing it with the Barhee BC4 reference genome, we identified key genetic variants, including single nucleotide polymorphisms (SNPs) and insertions/deletions (INDELs), potentially associ-ated with ripening processes and fruit quality. This work expands the genomic resources for date palm research, particularly for North African cultivars, and provides new insights into the nucleotide-level variability of genes linked to key agronomic traits.
DOI: 10.3535/gk2-5kz-kjv
title: Balanus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2xw-max-wrp
title: Heterocypris Claus, 1892

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xyh-4d2-ksd
title: Leander tenuicornis (Say, 1818)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0re-4qm-w3g
title: Ocypode cursor (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1lf-azg-5r7
title: Macropodia rostrata (Linnaeus, 1761)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wgm-2vw-xhb
title: Bentheogennema pasithea (De Man, 1907)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zfv-0xh-8z0
title: Pagurus bernhardus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.zerm38
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capsella bursa-pastoris (L.) Medik.",
 "Country is Kyrgyzstan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 21 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103551-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/1pw-8ya-ckh
title: Pachycheles ackleianus A. Milne-Edwards, 1880

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.q9nqnv
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acalypha lanceolata Willd.",
 "Country is Papua New Guinea",
 "HasCoordinate is true"
 ]
}

 The dataset includes 24 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103549-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/gnb6hh34pc
title: Physiological and Biochemical Insights of Improved Salinity Tolerance in Limonium irtaense Through Recovery from Salt Exposure During Germination
DOI: 10.3535/2ta-7p0-nsq
title: Inachidae MacLeay, 1838

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wsw-3cx-l6v
title: Palaemon serratus (Pennant, 1777)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6gz-w5r-w2c
title: Processa parva Holthuis, 1951

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fga-7d8-gc6
title: Sicyonia rectirostris De Man, 1907

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17632/gnb6hh34pc.1
title: Physiological and Biochemical Insights of Improved Salinity Tolerance in Limonium irtaense Through Recovery from Salt Exposure During Germination
DOI: 10.3535/11d-w19-83c
title: Coenobita brevimanus Dana, 1852

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lgn-nx0-blk
title: Xantho pilipes A. Milne-Edwards, 1867

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.45wyqw
title: Occurrence Download

description: A dataset containing 3131 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capsella bursa-pastoris (L.) Medik.",
 "Country is Ukraine",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3131 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103552-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/8db-k1c-9xy
title: Pachycheles ackleianus A. Milne-Edwards, 1880

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kpn-lfr-rmt
title: Coenobita rugosus H. Milne-Edwards, 1837

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ymp-bv6-907
title: Alpheus barbatus Coutière, 1897

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p26-y6d-x6m
title: Alpheus barbatus Coutière, 1897

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r5m-6z7-b55
title: Poecilasma

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/55a-tzh-nhq
title: Balanus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dtv-ql1-21g
title: Poecilasmatidae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2nl-kkn-9wj
title: Ilyocypris Brady & Norman, 1889

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b6l-1pq-sny
title: Chlamydotheca unispinosa (Baird, 1862)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7s5-1ne-tcz
title: Chlamydotheca unispinosa (Baird, 1862)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7b9-zgn-xlk
title: Polybius navigator (Herbst, 1794)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r1b-1h6-42q
title: Pinnotheres pisum (Linnaeus, 1767)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n37-xld-whx
title: Pandalina brevirostris (Rathke, 1843)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v68-8gh-fw6
title: Palaemon varians Leach, 1813

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lle-1t0-s17
title: Eodemus hastatoides (Fabricius, 1798)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.eqzzn8
title: Occurrence Download

description: A dataset containing 242 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capsella bursa-pastoris (L.) Medik.",
 "Country is Chile",
 "HasCoordinate is true"
 ]
}

 The dataset includes 242 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103548-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/5sw-4gm-zak
title: Viaderiana affinis (Tesch, 1918)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k97-y8c-6xj
title: Palaemon varians Leach, 1813

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.cfd43m
title: Occurrence Download

description: A dataset containing 1409 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is El género Bursera en México. Parte II"
 ]
}

 The dataset includes 1409 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103550-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/1v3-vef-hjt
title: Palaemon varians Leach, 1813

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1ym-kg0-dt4
title: Athanas nitescens (Leach, 1813)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tm4-xzp-dkb
title: Ebalia tumefacta (Montagu, 1808)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zbp-7a1-n6s
title: Xantho Leach, 1814

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/x5q-a4a-7bp
title: Balanus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/89a-30x-sax
title: Monocorophium insidiosum (Crawford, 1937)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9j3-g38-vn0
title: Atyaephyra desmarestii (Millet, 1831)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/50f-9cj-36x
title: Balanus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q4w-2qv-7rm
title: Eiconaxius weberi (De Man, 1907)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ghh-mfb-hgb
title: Manarma moeschii (De Man, 1892)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/amj-b03-sx3
title: Acanthephyra armata A. Milne-Edwards, 1881

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ay4-6xc-lzy
title: Pinnotheres pisum (Linnaeus, 1767)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8qb-p3c-zxs
title: Hyastenus sebae White, 1847

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s5a-5fs-pgb
title: Metapenaeopsis sibogae (De Man, 1907)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qmh-eax-v8j
title: Balanus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zz6-vy6-flx
title: Crangon crangon (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rmk-e18-j7m
title: Incultus tuberculosus (A. Milne-Edwards, 1861)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17632/b74ksh93cv
title: Kinetic effects on carbonate clumped isotopes (Δ47): New experimental insights and cryogenic calibration extension to -15℃

description: Paer data for the corresponding paper
DOI: 10.3535/lzs-j8v-2kz
title: Elminius

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wph-c53-gt7
title: Acanthephyra armata A. Milne-Edwards, 1881

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.17632/b74ksh93cv.2
title: Kinetic effects on carbonate clumped isotopes (Δ47): New experimental insights and cryogenic calibration extension to -15℃

description: Paer data for the corresponding paper
DOI: 10.3535/38y-0xd-lfr
title: Scalpellum

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/81t-yrt-e8a
title: Balanus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/78l-k81-z9q
title: Clibanarius cruentatus (H. Milne-Edwards, 1848)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/98x-xrr-r7a
title: Megalasma

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pyr-yy9-80t
title: Pollicipes

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sdz-3cm-szj
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sdt-7vz-08r
title: Niphargus pachypus Schellenberg, 1933

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c6j-dzh-44c
title: Micratya poeyi (Guérin-Méneville, 1855)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kye-s6s-wcc
title: Pontophilus Leach, 1817

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/efx-q0y-e33
title: Palaemon longirostris H. Milne-Edwards, 1837

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l5h-wdx-mzk
title: Nepinnotheres pinnotheres (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lf8-f0d-73z
title: Eualus cranchii (Leach, 1817)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qk5-9ff-1mj
title: Portunus sanguinolentus (Herbst, 1783)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xrs-cpj-nbp
title: Galathea intermedia Lilljeborg, 1851

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0mg-y9z-1vc
title: Heteralepadidae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pwv-gfv-1hq
title: Pisidia longicornis (Linnaeus, 1767)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5jp-0j2-lwd
title: Marginella Lamarck, 1799

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.15537617
title: Hippocampal Representations Drift in Stable Multisensory Environments

description: This is the code and data repository for the Climer*, Davoudi*, Oh*, and Dombeck paper titled "Hippocampal representations drift in stable multisensory environments". Code was run in MATLAB 2024a

 

Each folder contains the data for five days of recording for measurements of hippocampal representational drift. Data from 30 mice were included in the paper.

 

Mouse 1-5 contains a folder called "Training ABFs", which contains the 

training and test day behavioral data. In the codebase, use "figure1e_d.m" 

to import and plot it.

 

In each folder is a folder named "alignment". This contains subfolders with 

various data.

CellReg - This contains the outputs of CellReg 

(https://github.com/zivlab/CellReg) and the results of the 

manual curation (curated_data.mat).

mat - This contains the mat files for the data in each session. 

The fields are:

corrected_ROIs: The aligned ROIs from CellReg

F: The florescence traces (AU)

Fc: The baseline corrected florescence (dfof)

Fc3: The significant transients (dfof)

fr: The sample rate (Hz)

lapEpochs: The epochs of each lap

lickBinned: The counts of licks in each frame

mi: The mean imaging field

ROIs: The ROI masks

s: The deconvolved signal

spks: The thresholded deconvoled signal

 

analysis - Contains the data for the Analysis class in the 

codebase. Each file is formatted for the particular

analysis. For more information, refer to the docs for a 

particular function in the "Analysis" folder in the code 

base.
DOI: 10.25505/fiz.icsd.cc2n3lr4
title: CSD 2446326: Experimental Crystal Structure Determination

description: Related Article: Shalini Sanjay Mishra, Debu Jana, Samar K. Das|2026|Polyhedron|283||doi:10.1016/j.poly.2025.117851
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.nzh62h
title: Occurrence Download

description: A dataset containing 1773 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Hong Kong, Macao, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Fraxinus chinensis"
 ]
}

 The dataset includes 1773 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007921-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17122264
title: High precision Pléiades satellite and drone photogrammetry dataset of Lascar volcano (2022-2023)

description: Here we present Pléiades satellite and drone photogrammetry dataset of Lascar’s summit crater, comprising: orthomosaics (0.5 m/pixel) and dense point clouds from 1 October 2022, 25 January 2023, 22 February 2023, and 25 October 2023; and thermal orthomosaics (0.75 m/pixel) acquired on 1 February 2023 (DJI Matrice 30T RTK) and 26 February 2023 (DJI Mavic 3T). All datasets were projected to global coordinates (WGS 1984 UTM Zone 19 South).
DOI: 10.5281/zenodo.17122265
title: High precision Pléiades satellite and drone photogrammetry dataset of Lascar volcano (2022-2023)

description: Here we present Pléiades satellite and drone photogrammetry dataset of Lascar’s summit crater, comprising: orthomosaics (0.5 m/pixel) and dense point clouds from 1 October 2022, 25 January 2023, 22 February 2023, and 25 October 2023; and thermal orthomosaics (0.75 m/pixel) acquired on 1 February 2023 (DJI Matrice 30T RTK) and 26 February 2023 (DJI Mavic 3T). All datasets were projected to global coordinates (WGS 1984 UTM Zone 19 South).
DOI: 10.15468/dl.gcrts4
title: Occurrence Download

description: A dataset containing 29473 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-77.38516 4.09913,-78.13022 2.22627,-75.52688 1.77074,-75.70219 3.78432,-77.38516 4.09913,-77.38516 4.09913))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sicalis flaveola (Linnaeus, 1766)"
 ]
}

 The dataset includes 29473 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005546-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1206452.10fu
title: SH1206452.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1206455.10fu
title: SH1206455.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.