cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11936433
title: data_for_AM2

description: This is the data repository for the manuscript: "Relative roles of energy and momentum fluxes in the tropical response to extratropical thermal forcing", submitted to AMS.<br>Datas are designed to be read and plotted via MATLAB.<br>The required data files (.mat) and code (.m) for each figure are located in the corresponding directories.<br>Outputted figures are saved in 'svgfile' directory.<br><br>please see README in the file for more info.<br>
DOI: 10.6084/m9.figshare.11936433.v1
title: data_for_AM2

description: This is the data repository for the manuscript: "Relative roles of energy and momentum fluxes in the tropical response to extratropical thermal forcing", submitted to AMS.<br>Datas are designed to be read and plotted via MATLAB.<br>The required data files (.mat) and code (.m) for each figure are located in the corresponding directories.<br>Outputted figures are saved in 'svgfile' directory.<br><br>please see README in the file for more info.<br>
DOI: 10.6084/m9.figshare.11936409
title: DATASET(rc and qc_set for two_phase flow)

description: <i>Figure 8 </i>Size, <i>S<sub>NW</sub></i>, of the set of invaded pipes at breakthrough as a function of <i>Ca</i> for various values of σ/&lt;<i>r</i>&gt; and <i>z</i> as indicated in the insets. The invading fluid was assumed fully non-wetting in these simulations and the viscosity ratio was <i>M</i> = 100. Note that the points corresponding to <i>Ca</i> = 10<sup>-6</sup> were obtained from invasion-percolation simulations. <i>Figure 9</i> Sizes <i>S</i><sub>1</sub> and <i>S</i><sub>2</sub> of the intersection sets {1} (abcd) and {2} (efgh) as functions of <i>Ca</i> for various values of σ/&lt;<i>r</i>&gt; and <i>z</i> as indicated in the insets. These simulations are the same as those of figure 8. <i>Figure 10</i> Size <i>S</i><sub>3</sub> of the intersection sets {3} as a function of <i>Ca</i> for various values of σ/&lt;<i>r</i>&gt; and <i>z</i> as indicated in the insets. These simulations are the same as those of figures 9 and 10.
DOI: 10.6084/m9.figshare.11936607.v1
title: PCV data set.xlsx

description: Data set on Prevalence of Polypoidal choroidal vasculopathy
DOI: 10.6084/m9.figshare.11936373.v1
title: LPO data and delay time calculation of amphibolites from Eastern Himalaya

description: LPO data of amphibolites from southern Tibet;Data of delay time vs. thickness for Tibetan amphibolites, experimental granulites and natural eclogites.<br>
DOI: 10.23641/asha.11936295
title: Question use after right-hemisphere brain damage (Minga et al., 2020)

description: <b>Purpose: </b>Right-hemisphere brain damage (RHD) can affect pragmatic aspects of communication that may contribute to an impaired ability to gather information. Questions are an explicit means of gathering information. Question types vary in terms of the demands they place on cognitive resources. The purpose of this exploratory descriptive study is to test the hypothesis that adults with RHD differ from neurologically healthy adults in the types of questions asked during a structured task.<b>Method:</b> Adults who sustained a single right-hemisphere stroke and neurologically healthy controls from the RHDBank Database completed the Unfamiliar Object Task of the RHDBank Discourse Protocol (Minga et al., 2016). Each task was video-recorded. Questions were transcribed using the Codes for the Human Analysis of Transcripts format. Coding and analysis of each response were conducted using Computerized Language Analysis (MacWhinney, 2000) programs.<b>Results: </b>The types of questions used differed significantly across groups, with the RHD group using significantly more content questions and significantly fewer polar questions than the neurologically healthy control group. In their content question use, adults with RHD used significantly more “what” questions than other question subtypes.<b>Conclusion: </b>Question-asking is an important aspect of pragmatic communication. Differences in the relative usage of question types, such as the reduced use of polar questions or increased use of content questions, may reflect cognitive limitations arising from RHD. Further investigations examining question use in this population are encouraged to replicate the current findings and to expand on the study tasks and measures.<br><b>Supplemental Material S1. </b>Wilcoxon rank sum test.<br>Minga, J., Fromm, D., DeVane-Williams, C., & MacWhinney, B. (2020). Question use in adults with right-hemisphere brain damage. <i>Journal of Speech, Language, and Hearing Research</i>. Advance online publication. https://doi.org/10.1044/2019_JSLHR-19-00063
DOI: 10.23641/asha.11936295.v1
title: Question use after right-hemisphere brain damage (Minga et al., 2020)

description: <b>Purpose: </b>Right-hemisphere brain damage (RHD) can affect pragmatic aspects of communication that may contribute to an impaired ability to gather information. Questions are an explicit means of gathering information. Question types vary in terms of the demands they place on cognitive resources. The purpose of this exploratory descriptive study is to test the hypothesis that adults with RHD differ from neurologically healthy adults in the types of questions asked during a structured task.<b>Method:</b> Adults who sustained a single right-hemisphere stroke and neurologically healthy controls from the RHDBank Database completed the Unfamiliar Object Task of the RHDBank Discourse Protocol (Minga et al., 2016). Each task was video-recorded. Questions were transcribed using the Codes for the Human Analysis of Transcripts format. Coding and analysis of each response were conducted using Computerized Language Analysis (MacWhinney, 2000) programs.<b>Results: </b>The types of questions used differed significantly across groups, with the RHD group using significantly more content questions and significantly fewer polar questions than the neurologically healthy control group. In their content question use, adults with RHD used significantly more “what” questions than other question subtypes.<b>Conclusion: </b>Question-asking is an important aspect of pragmatic communication. Differences in the relative usage of question types, such as the reduced use of polar questions or increased use of content questions, may reflect cognitive limitations arising from RHD. Further investigations examining question use in this population are encouraged to replicate the current findings and to expand on the study tasks and measures.<br><b>Supplemental Material S1. </b>Wilcoxon rank sum test.<br>Minga, J., Fromm, D., DeVane-Williams, C., & MacWhinney, B. (2020). Question use in adults with right-hemisphere brain damage. <i>Journal of Speech, Language, and Hearing Research</i>. Advance online publication. https://doi.org/10.1044/2019_JSLHR-19-00063
DOI: 10.6084/m9.figshare.11936250
title: Patterson et al. (2020) Evolutionary relationships and population genetics of the Afrotropical leaf-nosed bats (Chiroptera: Hipposideridae). ZooKeys

description: DNA sequence alignments used in analyses for Patterson et al. (2020) Evolutionary relationships and population genetics of the African leaf-nosed bats (Chiroptera: Hipposideridae). ZooKeys<br>
DOI: 10.6084/m9.figshare.11936232
title: OD measurements and calculated growth rates

description: Standard bacteriological media MHB (Sigma-Aldrich) was supplemented with 25 mg/L Ca2+ and 12.5 mg/L Mg2+ (CA-MHB). Eukaryotic cell culture media Roswell Park Memorial Institute 1640 (RPMI) (Thermo Fisher Scientific) was supplemented with 10% LB (R10LB). Broth microdilution was performed to determine the nafcillin MIC in each media condition. On the day of the experiment, overnight cultures of HA-MRSA D592 were diluted to a starting OD600 of 0.01 into fresh media and grown at 37°C with stirring to OD600 0.4. This preculture was then diluted back to OD600 0.01 into fresh media containing no drug or sub-inhibitory concentrations of nafcillin relative for each media type. Growth was monitored by obtaining OD600 readings every 45 min for 6 hr. Three biological replicates were collected for the study, each derived from different colony and overnight culture.
DOI: 10.6084/m9.figshare.11936229
title: Robust and efficient wireless power transfer using a switch-mode implementation of a nonlinear parity-time symmetric circuit: Support data

description: This depository contains data from measurements, simulations, and calculations presented in a working manuscript: Robust and efficient wireless power transfer using a switch-mode implementation of a nonlinear parity-time symmetric circuit.
DOI: 10.6084/m9.figshare.11936232.v1
title: OD measurements and calculated growth rates

description: Standard bacteriological media MHB (Sigma-Aldrich) was supplemented with 25 mg/L Ca2+ and 12.5 mg/L Mg2+ (CA-MHB). Eukaryotic cell culture media Roswell Park Memorial Institute 1640 (RPMI) (Thermo Fisher Scientific) was supplemented with 10% LB (R10LB). Broth microdilution was performed to determine the nafcillin MIC in each media condition. On the day of the experiment, overnight cultures of HA-MRSA D592 were diluted to a starting OD600 of 0.01 into fresh media and grown at 37°C with stirring to OD600 0.4. This preculture was then diluted back to OD600 0.01 into fresh media containing no drug or sub-inhibitory concentrations of nafcillin relative for each media type. Growth was monitored by obtaining OD600 readings every 45 min for 6 hr. Three biological replicates were collected for the study, each derived from different colony and overnight culture.
DOI: 10.6084/m9.figshare.11936190
title: Data_products_Phobos_ion_implantation_MAVEN

description: This dataset contains the long-term averaged flux of ions impacting the surface of Phobos as observed by the NASA MAVEN STATIC experiment.<br><br>The implantation rate of exogenous atoms transported by impacting ions inside Phobos' regolith grains and the production rate of vacancies inside grains by impacting ions were computed with the SRIM software and are given in this dataset.<br>
DOI: 10.6084/m9.figshare.11936190.v1
title: Data_products_Phobos_ion_implantation_MAVEN

description: This dataset contains the long-term averaged flux of ions impacting the surface of Phobos as observed by the NASA MAVEN STATIC experiment.<br><br>The implantation rate of exogenous atoms transported by impacting ions inside Phobos' regolith grains and the production rate of vacancies inside grains by impacting ions were computed with the SRIM software and are given in this dataset.<br>
DOI: 10.6084/m9.figshare.11935623
title: Dataset eye-tracking trials + survey results

description: Dataset containing trial results (N=96) of an experiment combining tracking eye movements of subjects reading a Facebook post and two comments from the Swedish tabloid newspaper Aftonbladet. The dataset also contains information about our Swedish participants (year of birth, gender) as well as results to a survey that asked about the likelihood to read and share the Facebook news item they were exposed to, as well as their preference for 5 news genres (Economy, Politics, Entertainment, Society, and Sports).<br>
DOI: 10.6084/m9.figshare.11935623.v1
title: Dataset eye-tracking trials + survey results

description: Dataset containing trial results (N=96) of an experiment combining tracking eye movements of subjects reading a Facebook post and two comments from the Swedish tabloid newspaper Aftonbladet. The dataset also contains information about our Swedish participants (year of birth, gender) as well as results to a survey that asked about the likelihood to read and share the Facebook news item they were exposed to, as well as their preference for 5 news genres (Economy, Politics, Entertainment, Society, and Sports).<br>
DOI: 10.6084/m9.figshare.11935557
title: DC1_1.fastq.gz

description: Positive dataset containing 110 thousand simulated circRNAs diluted with simulated linear mRNA reads
DOI: 10.6084/m9.figshare.11935548
title: The contribution of methane photoproduction to the oceanic methane paradox

description: This is the data reported in the manuscript, entitled "The contribution of methane photoproduction to the oceanic methane paradox", submitted to Geophysical Research Letters for consideration for publication.
DOI: 10.6084/m9.figshare.11935554
title: DC1_2.fastq.gz

description: Positive dataset containing 110 thousand simulated circRNAs diluted with simulated linear mRNA reads
DOI: 10.6084/m9.figshare.11935455
title: A new enigmatic genus of subterranean amphipod (Amphipoda: Bogidielloidea) from Terrell County, Texas, with the establishment of Parabogidiellidae fam. nov. and notes on the family Bogidellidae

description: This dataset contains:<br>* Individual alignments for the 18S, 28S and COI markers.* Individual test trees for each of the aforementioned genes, reconstructed to exclude unreliable sequences.* A concatenated sequence alignment of the three aforementioned genes. * A maximum likelihood phylogenetic tree of the concatenated dataset, with all nodes un-collapsed
DOI: 10.6084/m9.figshare.11935554.v1
title: DC1_2.fastq.gz

description: Positive dataset containing 110 thousand simulated circRNAs diluted with simulated linear mRNA reads
DOI: 10.6084/m9.figshare.11935557.v1
title: DC1_1.fastq.gz

description: Positive dataset containing 110 thousand simulated circRNAs diluted with simulated linear mRNA reads
DOI: 10.6084/m9.figshare.11935455.v1
title: A new enigmatic genus of subterranean amphipod (Amphipoda: Bogidielloidea) from Terrell County, Texas, with the establishment of Parabogidiellidae fam. nov. and notes on the family Bogidellidae

description: This dataset contains:<br>* Individual alignments for the 18S, 28S and COI markers.* Individual test trees for each of the aforementioned genes, reconstructed to exclude unreliable sequences.* A concatenated sequence alignment of the three aforementioned genes. * A maximum likelihood phylogenetic tree of the concatenated dataset, with all nodes un-collapsed
DOI: 10.6084/m9.figshare.11935437
title: Medicago Truncatula Reference

description: Source: "The Medicago genome provides insight into the evolution of rhizobial symbioses"<br>
DOI: 10.6084/m9.figshare.11935437.v1
title: Medicago Truncatula Reference

description: Source: "The Medicago genome provides insight into the evolution of rhizobial symbioses"<br>
DOI: 10.6084/m9.figshare.11935197
title: Haber et al. (2020) Forest structure, diversity, and primary production in relation to disturbance severity. Ecology and Evolution. SUPPORTING DATA

description: Supporting data for 2020 manuscript by Haber et al. in <i>Ecology and Evolution</i>. Data include the following types:Hemispherical photos and associated analysis (for LAI derivation)Stem map data sets from 2007, 2015, and 2016 (used to calculate species diversity, structural metrics, net primary production)Photosynthetically active radiation from above and below canopy (used to calculate fPAR)Leaf mass per area for sampled leavesLarge number of .xls files generated by LICOR 6400XT portable photosynthesis meter for subcanopy leaves. (Files have one of two naming structures, as in the following examples: B82_08.17.16_N4_1m.xls for Asat measurements; or B82_08.17.16.N4_1m_LRC.xls for light response curve autoprogram measurements.)<br>Contact me (haberlt@vcu.edu) for further information if needed.<br>
DOI: 10.6084/m9.figshare.11935197.v1
title: Haber et al. (2020) Forest structure, diversity, and primary production in relation to disturbance severity. Ecology and Evolution. SUPPORTING DATA

description: Supporting data for 2020 manuscript by Haber et al. in <i>Ecology and Evolution</i>. Data include the following types:Hemispherical photos and associated analysis (for LAI derivation)Stem map data sets from 2007, 2015, and 2016 (used to calculate species diversity, structural metrics, net primary production)Photosynthetically active radiation from above and below canopy (used to calculate fPAR)Leaf mass per area for sampled leavesLarge number of .xls files generated by LICOR 6400XT portable photosynthesis meter for subcanopy leaves. (Files have one of two naming structures, as in the following examples: B82_08.17.16_N4_1m.xls for Asat measurements; or B82_08.17.16.N4_1m_LRC.xls for light response curve autoprogram measurements.)<br>Contact me (haberlt@vcu.edu) for further information if needed.<br>
DOI: 10.6084/m9.figshare.11933610
title: Do-file for peri-urban DCE in Kenya

description: Do-files for DCE in a peri-urban setting in Kenya
DOI: 10.6084/m9.figshare.11933568
title: Peri-urban DCE and baseline dataset

description: Dataset of Discrete Choice Experiment data and soiocdemographic data for women in a peri urban setting in Kenya
DOI: 10.6084/m9.figshare.11933520
title: Supplemental Data 3 - Neonatal Heart Simulation

description: This is the supplemental data 3 - mouse neonatal heart analysis, in manuscript: Nguyen et al. Polar Gini Curve: a Technique to Discover Single-cell Biomarker Using 2D Visual Information<br>
DOI: 10.6084/m9.figshare.11933475
title: Supplemental Data 2 - Fetal Mouse Lung Simulation

description: This is the Supplemental Data 2, including data and source code, in manuscript: Nguyen et al. Polar Gini Curve: a Technique to Discover Single-cell Biomarker Using 2D Visual Information<br>
DOI: 10.6084/m9.figshare.11933451
title: Data

description: Comma-delimited files that contain data on functional diversity of the complete community, forest birds and non-forest birds obtained for 40 forest sites within Brazilian Atlantic forest.This dataset was used to the accepted manuscript for publication in Biotropica.Matuoka, M.A., Benchimol, M. & Morante-Filho, J.C. Tropical forest loss drives divergent patterns in functional diversity of forest and non-forest birds. Biotropica.<br><br>
DOI: 10.6084/m9.figshare.11933475.v1
title: Supplemental Data2 Neonatal Mouse Lung Simulation

description: This is the Supplemental Data 2, including data and source code, in manuscript: Nguyen et al. Polar Gini Curve: a Technique to Discover Single-cell Biomarker Using 2D Visual Information<br>
DOI: 10.6084/m9.figshare.11933451.v1
title: Data

description: Comma-delimited files that contain data on functional diversity of the complete community, forest birds and non-forest birds obtained for 40 forest sites within Brazilian Atlantic forest.This dataset was used to the accepted manuscript for publication in Biotropica.Matuoka, M.A., Benchimol, M. & Morante-Filho, J.C. Tropical forest loss drives divergent patterns in functional diversity of forest and non-forest birds. Biotropica.<br><br>
DOI: 10.6084/m9.figshare.11933421
title: Supplemental Data 1 - Circle-shaped Simulation

description: This is supplemental data 1, the circle-shaped simulation in manuscript Nguyen et al. Polar Gini Curve: a Technique to Discover Single-cell Biomarker Using 2D Visual Information<br>
DOI: 10.6084/m9.figshare.11933412
title: Medicao Truncatula de novo assemblies

description: All 21 assemblies of Medicago trunactula species. Source: http://www.medicagohapmap.org/downloads/assemblies
DOI: 10.6084/m9.figshare.11933475.v2
title: Supplemental Data 2 - Neonatal Mouse Lung Simulation

description: This is the Supplemental Data 2, including data and source code, in manuscript: Nguyen et al. Polar Gini Curve: a Technique to Discover Single-cell Biomarker Using 2D Visual Information<br>
DOI: 10.6084/m9.figshare.11933412.v1
title: Medicao Truncatula de novo assemblies

description: All 21 assemblies of Medicago trunactula species. Source: http://www.medicagohapmap.org/downloads/assemblies
DOI: 10.6084/m9.figshare.11933421.v1
title: Supplemental Data 1 _ Circle-shaped Simulation

description: This is supplemental data 1, the circle-shaped simulation in manuscript Nguyen et al. Polar Gini Curve: a Technique to Discover Single-cell Biomarker Using 2D Visual Information<br>
DOI: 10.6084/m9.figshare.11933391
title: Metadata record for: Multidisciplinary database of permeability of fault zones and surrounding protolith rocks at world-wide sites

description: This dataset contains key characteristics about the data described in the Data Descriptor Multidisciplinary database of permeability of fault zones and surrounding protolith rocks at world-wide sites. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.11933391.v1
title: Metadata record for: Multidisciplinary database of permeability of fault zones and surrounding protolith rocks at world-wide sites

description: This dataset contains key characteristics about the data described in the Data Descriptor Multidisciplinary database of permeability of fault zones and surrounding protolith rocks at world-wide sites. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.11933355
title: Data and supplemental tables from Colour dimorphism in labrid fishes as an adaptation to life on coral reefs

description: File contains the data presented in Table S1 and Table S4
DOI: 10.6084/m9.figshare.11933346
title: Output for Quantum Chemical Computation using PySCF from Uncovering dark multichromophoric states in Peridinin Chlorophyll Protein

description: Output for the peridinin-chlorophyll dimer system assessed in this manuscript using the PySCF quantum-chemistry package
DOI: 10.6084/m9.figshare.11933349
title: Supplementary Data from Terrestrial habitats decouple the relationship between species and subspecies diversification in mammals

description: Data used in analyses
DOI: 10.6084/m9.figshare.11933346.v1
title: Output for Quantum Chemical Computation using PySCF from Uncovering dark multichromophoric states in Peridinin Chlorophyll Protein

description: Output for the peridinin-chlorophyll dimer system assessed in this manuscript using the PySCF quantum-chemistry package
DOI: 10.6084/m9.figshare.11933349.v1
title: Supplementary Data from Terrestrial habitats decouple the relationship between species and subspecies diversification in mammals

description: Data used in analyses
DOI: 10.25380/iastate.11933214
title: Effect of cover crops on weed biomass and density in the US Midwest Corn Belt meta-analysis dataset

description: This dataset contains paired measurements of weed biomass and/or weed density taken in a control corn/soybean rotation and the same rotation with a winter cover crop. The data was pulled from 15 published studies that took place within one of the 12 top corn-producing states in the US, which make up the Midwestern Corn Belt. <br>
DOI: 10.25380/iastate.11933214.v1
title: Effect of cover crops on weed biomass and density in the US Midwest Corn Belt meta-analysis dataset

description: This dataset contains paired measurements of weed biomass and/or weed density taken in a control corn/soybean rotation and the same rotation with a winter cover crop. The data was pulled from 15 published studies that took place within one of the 12 top corn-producing states in the US, which make up the Midwestern Corn Belt. <br>
DOI: 10.6084/m9.figshare.11933313.v2
title: Corporate (Board Interconnectivity Data) [social network]

description: An XML file resultant from research on social networks formed via corporate board membership. "Explorable" data using visualization tools such as Cytoscape. <br><br>Collected from open data sources via automated programs using data produced and processed from sources believed to be reliable; no warranty, expressed or implied, is made regarding accuracy, adequacy, completeness, legality, reliability or usefulness of any information. This disclaimer applies to both isolated and aggregate uses of the information. The information is provided on an "as is" basis.