cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/zcf22sjps8.1
title: Distinct Chromatin Scanning Modes Lead to Targeting of Compacted Chromatin by Pioneer Factors FOXA1 and SOX2

description: Pioneer transcription factors interact with nucleosomes to scan silent, compact chromatin, enabling cooperative events that modulate gene activity.  While at a subset of sites, pioneer factors access chromatin by assisted loading with other transcription factors, the nucleosome binding properties of pioneer factors enable them to initiate zygotic genome activation, embryonic development, and cellular reprogramming.  To better understand nucleosome targeting in vivo, we assessed whether pioneer factors FoxA1 and Sox2 target stable or unstable nucleosomes and found that they target DNase-resistant, stable nucleosomes, whereas HNF4A, a non-nucleosome binding factor, targets open, DNase-sensitive chromatin.  Despite FOXA1 and SOX2 targeting similar proportions of DNase-resistant chromatin, using single-molecule tracking, we found that FOXA1 uses lower nucleoplasmic diffusion and longer residence times while SOX2 uses higher nucleoplasmic diffusion and shorter residence times to scan compact chromatin, while HNF4 does not scan compact chromatin.  Thus pioneer factors target compact chromatin through distinct processes.
DOI: 10.17632/brr4x3s887.1
title: Academic integrity model perceptions

description: Resultados encuestas de opinión de estudiantes y profesores acerca de elementos de un modelo de integridad académica
DOI: 10.17632/6ghypdpdn7.1
title: TaxmoraleHungary

description: The dataset is based on an online survey on Hungarian taxpayers' behavior. Data collection was prepared by NRC Market Research Ltd. and took place in July, 2021, with 500 respondents.
DOI: 10.17632/8ndw92bz8k.1
title: Stata code for "Time-varying Z-score measures for bank insolvency risk: best practice"

description: This Stata code, which accompanies our paper "Time-varying Z-score measures for bank insolvency risk: best practice", calculates exponentially weighted mean and variance for a set of decay factors; it also outputs the 3-period moving average/variance (fast code).
DOI: 10.17632/8ndw92bz8k.2
title: Stata code for "Time-varying Z-score measures for bank insolvency risk: best practice"

description: This Stata code, which accompanies our paper "Time-varying Z-score measures for bank insolvency risk: best practice", calculates exponentially weighted mean and variance for a set of decay factors; it also outputs the 3-period moving average/variance (fast code).
DOI: 10.17632/8ndw92bz8k.3
title: Stata code for "Time-varying Z-score measures for bank insolvency risk: best practice"

description: This Stata code, which accompanies our paper "Time-varying Z-score measures for bank insolvency risk: best practice", calculates exponentially weighted mean and variance for a set of decay factors; it also outputs the 3-period moving average/variance (fast code).
DOI: 10.17632/tmx46g6wxc.1
title: Mo contents and Mo isotope compositions of the Fushui and Tongbai mafic igneous rocks

description: Mo contents and Mo isotope compositions of the Fushui and Tongbai mafic igneous rocks
DOI: 10.17632/x9m8yp6jb4.1
title: Article_International

description: ECI, Families
DOI: 10.17632/zxy9j3tc35.2
title: Chronic Non-Communicable Diseases Registry Assessment Survey, Trinidad, 2019.

description: Implementation outcomes of a chronic non-communicable diseases registry in South Trinidad.
DOI: 10.17632/5c7z5pnk66.1
title: Online destination´s popularity and COVID-19

description: Data mainly merging two datasets: Google Destination Insights and Oxford COVID-19 Government Response Tracker (OxCGRT). From Google Destination Insights was collected a daily index for bilateral online travel searches, while from OxCGRT was collected a daily index measuring the overall governments responses to the COVID-19 pandemic. This daily indices were transformed into monthly indices to match data for GDP per capita and exchange rate collected from the International Monetary Fund website. The data was extracted from January 2020 to September 2022 to build an unbalanced panel data set for 13 origin countries and 26 destination countries.
DOI: 10.17632/hmyhtxppvn.1
title: Improving learning achievement and self-regulated learning through AI-enabled formative assessment and visual reports: An experimental study

description: A total of 125 participants enrolled in ninth-grade biology courses participated in the experimental study and were assigned to one of two groups: a treatment group (n = 63), who received AI-enabled formative assessment in a visual format, and a control group (n = 62), who received a traditional assessment in the form of test scores and teacher feedback. Repeated-measures analysis of variance and nonparametric test results showed that the visual reports effectively improved students’ learning achievement. The results provide important implications for designing and implementing effective formative assessments supported by AI and visualization
DOI: 10.17632/vhh9cg2wzt.2
title: Panel_democ_stability_growth_MENA_Over_1983_2019

description: This panel dataset presents information on the impact of democracy and political stability on economic growth in 15 MENA countries for the period 1983-2022. The data are collected from five different sources; the World Bank Development Indicators (WDI), the World Bank Governance Indicators (WGI), the Penn World Table (PWT), Polity5 from the Integrated Network for Societal Conflict Research (INSCR), and the Varieties of Democracy (V-Dem). The dataset includes ten variables related to economic growth, democracy, and political stability. Data analysis was performed using statistical methods such as R in order to ensure data reliability through imputing missing data; hence, enabling future researchers to explore the impact of political factors on growth in various contexts. The data are presented in two sheets, before and after the imputation for missing values. The potential reuse of this dataset lies in the ability to examine the impact of different political factors on economic growth in the region.
DOI: 10.17632/vhh9cg2wzt.1
title: Panel_democ_stability_growth_MENA_Over_1983_2019

description: This panel dataset presents information on the impact of democracy and political stability on economic growth in 15 MENA countries for the period 1983-2019. The data are collected from five different sources; the World Bank Development Indicators (WDI), the World Bank Governance Indicators (WGI), the Penn World Table (PWT), Polity5 from the Integrated Network for Societal Conflict Research (INSCR), and the Varieties of Democracy (V-Dem). The dataset includes ten variables related to economic growth, democracy, and political stability. Data analysis was performed using statistical methods such as R in order to ensure data reliability through imputing missing data; hence, enabling future researchers to explore the impact of political factors on growth in various contexts. The data are presented in two sheets, before and after the imputation for missing values. The potential reuse of this dataset lies in the ability to examine the impact of different political factors on economic growth in the region.
DOI: 10.17632/vhh9cg2wzt.3
title: Panel_democ_stability_growth_MENA_Over_1983_2022

description: This panel dataset presents information on the impact of democracy and political stability on economic growth in 15 MENA countries for the period 1983-2022. The data are collected from five different sources; the World Bank Development Indicators (WDI), the World Bank Governance Indicators (WGI), the Penn World Table (PWT), Polity5 from the Integrated Network for Societal Conflict Research (INSCR), and the Varieties of Democracy (V-Dem). The dataset includes ten variables related to economic growth, democracy, and political stability. Data analysis was performed using statistical methods such as R in order to ensure data reliability through imputing missing data; hence, enabling future researchers to explore the impact of political factors on growth in various contexts. The data are presented in two sheets, before and after the imputation for missing values. The potential reuse of this dataset lies in the ability to examine the impact of different political factors on economic growth in the region.
DOI: 10.17632/xc3vs6wy9b.1
title: ISONIAZID PREVENTIVE THERAPY COMPLETION AND FACTORS ASSOCIATED WITH NON-COMPLETION AMONG PATIENTS ON ANTIRETROVIRAL THERAPY AT KISENYI HEALTH CENTRE IV, KAMPALA, UGANDA.

description: This is a dataset of patients on ART intiated on Isoniazid preventive therapy (IPT) in September 2019. It includes variables on patient characteristics including age, sex, HIV viral suppression status, HIV clinical stage, IPT status, among others. We aimed to determine the completion level of IPT among those initiated and the patient related factors of IPT non-completion.
DOI: 10.17632/ds534bsxmp.1
title: Gerbil risk-taking behaviour

description: Data for gerbil risk-taking paper
DOI: 10.17632/jbjzvmtfj8.1
title: Urban Heat Island Mitigation via Rooftop Garden - Sensor based data comparison

description: 2 rooms of a Chennai, Tamil Nadu, India-based facility were fitted with sensors at the terrace and room level. One room's terrace had a roof garden, and the other was exposed. The dataset presents the details of the temperature and humidity recorded at 4 places (garden indoor, garden outdoor, exposed indoor and exposed outdoor).

Two sets of industry-grade temperature and humidity sensors were installed for data collection. These sensors included cased sensors for outdoor measurements and exposed sensors for internal regions. One set of sensors was placed in the baseline monitoring zone, which was the area without a garden, while the second set was installed in the green/heat mitigation monitoring zone, which 
was the area with the garden. 
The precise locations of the four installed sensors were as follows:
1. The external baseline sensor was positioned in the southwest corner of the terrace in the exposed portion.
2. The internal baseline sensor was mounted on the restroom ceiling, below the external sensor in the southwest corner.
3. The external sensor for measuring data from the green roof was installed among the planter bags, near the parapet wall.
4. A corresponding internal sensor to measure the impact of the green terrace was mounted on the ceiling of the storeroom directly below the planter bags.
In addition to the sensors, secondary weather data for the larger Otteri neighbourhood was sourced from weather online, AccuWeather and Visual Crossing to complement the study.
DOI: 10.17632/jbjzvmtfj8.2
title: Urban Heat Island Mitigation via Rooftop Garden - Sensor based data comparison

description: 2 rooms of a Chennai, Tamil Nadu, India-based facility were fitted with sensors at the terrace and room level. One room's terrace had a roof garden, and the other was exposed. The dataset presents the details of the temperature and humidity recorded at 4 places (garden indoor, garden outdoor, exposed indoor and exposed outdoor).

Two sets of industry-grade temperature and humidity sensors were installed for data collection. These sensors included cased sensors for outdoor measurements and exposed sensors for internal regions. One set of sensors was placed in the baseline monitoring zone, which was the area without a garden, while the second set was installed in the green/heat mitigation monitoring zone, which 
was the area with the garden. 
The precise locations of the four installed sensors were as follows:
1. The external baseline sensor was positioned in the southwest corner of the terrace in the exposed portion.
2. The internal baseline sensor was mounted on the restroom ceiling, below the external sensor in the southwest corner.
3. The external sensor for measuring data from the green roof was installed among the planter bags, near the parapet wall.
4. A corresponding internal sensor to measure the impact of the green terrace was mounted on the ceiling of the storeroom directly below the planter bags.
In addition to the sensors, secondary weather data for the larger Otteri neighbourhood was sourced from weather online, AccuWeather and Visual Crossing to complement the study.
DOI: 10.17632/8yr83bz9b3.1
title: Oligonucleotides sequences

description: Oligonucleotides sequences
DOI: 10.17632/4y3h9kp4y8.1
title: Gene ontology term enrichment for biological processes

description: Gene ontology term enrichment for biological processes from dysregulated genes of lungs of SARS-CoV-2 infected hamsters.
DOI: 10.17632/4w5z7crgsv.1
title: Overview of RNAseq data of the lungs of SARS-CoV-2 infected hamsters treated with the CYP19A1 inhibitor letrozole

description: Transcriptomic data obtained from lungs of SARS-CoV-2 infected hamsters treated with the CYP19A1 inhibitor letrozole.
DOI: 10.17632/5vz8rjdwnf.1
title: MS-DGAT

description: DATA for the submitted manuscript
DOI: 10.17632/kbgt58z2nm.1
title: Original Western blot images for Wu et al.

description: Original Western blot images for “Wu et al. Hepatic soluble epoxide hydrolase activity requlates cerebral AB metabolism andAlzheimer's disease in mice, Neuron (2023), https://doi.org/10.1016/i.neuron.2023.06.002”,  including Figures 1D, 2B, 3B, 3G, 4C, 4G, 5A, 5C-5E, 5H, 5K, 6E, 6M, 6O, 6P, and 6Q; as well as Supplementary Figures 4E, 4J, 5E, 5G, 6C, 6D, and 8C；
DOI: 10.17632/kbgt58z2nm.2
title: Original Western blot images for Wu et al.

description: Original Western blot images for “Wu et al. Hepatic soluble epoxide hydrolase activity requlates cerebral Aβ metabolism and Alzheimer's disease in mice, Neuron (2023), https://doi.org/10.1016/j.neuron.2023.06.002”,  including Figures 1D, 2B, 3B, 3G, 4C, 4G, 5A, 5C-5E, 5H, 5K, 6E, 6M, 6O, 6P, and 6Q; as well as Supplementary Figures 4E, 4J, 5E, 5G, 6C, 6D, and 8C；
DOI: 10.17632/4xytrnhx76.1
title: Demographic information of deceased COVID-19 patients and controls.

description: Demographic data of deceased COVID-19 patients and controls, which were analyzed by qPCR and immunohistochemistry.
DOI: 10.17632/kkmzjr3wv7.1
title: Laser Powder-Bed Fusion Simulation of mechanical data at part scale (IHPC-A*star)

description: # Data set description
This dataset is attached to research paper *"Data-driven surrogate modelling of residual stresses in Laser Powder-Bed Fusion"* 
written by L. Lestandi, J.C. Wong, G.Y. Dong, J. Mikula, G. Vastola, U. Kizhakkinan, C.S. Ford, D.W. Rosen, M.H. Dao, M.H. Jhon.
It was generated using A*Star Digital Twin for Additive Manufacturing and is used in the paper for surrogate modeling.

This data was produced with the financial support was provided by the Science and Engineering Research Council, A*STAR, Singapore (Grant no. A19E1a0097).

## Geometries
Two families of geometries are present: 
1. A quasi 2D plate with hole. The hole is a parametrized ellipsoid with 2 paramters : M the length of the long axis and $\Theta$, the tilt angle of the long axis which are reflected in the naming convention. An unused paramet m is unused and always read 10. 
2. A "wedge" 3D geometry with varying height, base and top width. lx is the lenght along axis x at the base plate, Lx is the lenght along axis x at the top of the wedge, H is the height of wedge and Ly is the length of the wedge. More details and figures are available in the paper.

## Data structure and content
Training sets and test sets are separated. The training sets are sampling the parametre space on a regular grid. The tests sets are made of 10 samples randomly drawn in the parameter space.
- `PWH_test-29-03-2023.zip`
  - contains 10 test samples for plate with hole geometry
- `PWH-29-03-2023.zip`
  - contains 143 training samples for plate with hole geometry + a "circular hole" sample which is used as a reference geometry in the paper
- `wedge_test-11-05-2023.zip`
  - contains 10 test samples for wedge geometry
- `wedge-11-05-2023.zip`
  - contains 150 training samples for wedge geometry

In each of these, individual samples are stored in a specific directory named after the geometry and a binary data file stores a python list of pyvista objects that can be opened with pickle, this is not recommended way to access the data but it is faster.

Each sample specific directory contains the following (here on plate with hole example):
- `PWH_M10_m10_theta0_V_pygem-as-built.vtk` the output of the FOM in VTK ascii format, the part has **not** been removed from the plate and no thermal postprocessing is performed
- `PWH_M10_m10_theta0_V_pygem-plate-removed.vtk` the output of the FOM in VTK ascii format, the part has been removed from the plate and no thermal postprocessing is performed
- `PWH_M10_m10_theta0_V_pygem.stl` the target geometry as fed to the model
Feel free to contact the first author for further details.
DOI: 10.5281/zenodo.8072816
title: data collection for machine learning using eddy force function data

description: Data for "On the choice of training data for machine learning of geostrophic mesoscale turbulence". Contains qgm2 code (from James Maddison, University of Edinburgh) for generating the data codes to process data from qgm2 for machine learning, and train convolutional neural networks to use the data sample data processed data to reproduce plots in the paper Files collected in different zip files to avoid the need to download the whole pack in one go. See readme for data/folder structure.
description: Financial support from HK RGC General Research Fund 16304021 as well as the Center for Ocean Research in Hong Kong and Macau.
DOI: 10.6084/m9.figshare.23565852
title: Validation of RP-HPLC for Nintedanib

description: This raw data is of validation of RP-HPLC method for well known anti-lung fibrotic and anticancer drug nintedanib and for its application in quantification in nanoformulations.Validation process was as per the ICH Q2(R1) regulatory guidelines.
DOI: 10.15151/esrf-es-1117950917
title: IBS BAG

description: The IBS BAG includes in this proposal IBS teams and external groups from CEA-Cadarache (St Paul lez Durance) and IRBA (Brétigny-sur-Orge). We study structure-function relationships of proteins emphasizing in human health, biotechnology and methodology. Most of the projects are a continuation of the MX-2398 proposal and can be grouped into different topics as follows: host-pathogen interaction, new drug targets, fundamental cellular mechanisms, membrane proteins, biotechnological applications and methodology. Some of these projects use integrative approaches (X-ray crystallography, SAXS, NMR (and cryo-EM), together with other biophysical studies) with the aim to fully understand the complexity of the biological macromolecular systems on study.
DOI: 10.15151/esrf-es-1118673146
title: ITABAG: 3D structures of macromolecules related to human health

description: The ITABAG includes structural biologists from Universities, the National Research Council and Hospital research centres in Italy. The laboratories take advantage of single crystal and small angle X-ray diffraction methods to study the structure-function relationships in various macromolecules. A unifying factor for the vast majority of the macromolecules under study is that they are related to human health, either directly, being human proteins involved in some disease, or indirectly, as proteins expressed by human pathogens and validated as potential pharmacological targets. Other projects investigate basic chemical processes, such as crystal growth, or aim at characterising macromolecules with potential biotechnological applications.
DOI: 10.15151/esrf-es-1120140218
title: Southampton, Bristol, Cardiff, Exeter, KCL, UCL Royal Free Block Allocation Group (BAG)

description: This BAG coordinates activities of groups from the South-West of the UK. The focus is on projects in Immunology, transcriptional regulation, and enzymology. A particular strength are the macromolecular complexes that several of the groups target. The activities in rational protein design (Bristol) and cancer immunology and enzyme mechanism (Southampton) are particular highlights. Cardiff is joining the bag as a new member. Please note comments in the report on COVID and sample shipment. Experimental work has been affected by Covid, which has reduced the output, and by travel restrictions. Further, we have had problems with loosing samples on transport as they were held up in customs, with three affected shipments. Due to these complexities Portsmouth have decided to leave the bag.
DOI: 10.15151/esrf-es-1201259212
title: Structural characterization of the light activated BLUF photoreceptor PAC

description: Photoreceptors containing a Blue-Light sensor Using Flavin (BLUF) are highly attractive for a broad range of applications. In this project, a photoactivated adenylate cyclase (PAC) containing a BLUF sensor domain coupled to an adenylyl cyclase (AC) effector domain is studied. For this, PAC protein was produced, purified and characterized. Structural changes around the FMN chromophore could be elucidated using time-resolved crystallography (TRX). However, structural changes happening in the AC domain could not be observed using crystallographic techniques as the crystal packing is preventing them. We suspect a bigger conformational change is required to activate the AC domain, which could be confirmed using SAXS. Therefore, the aim of the experiment is to measure SAXS data on PAC in its dark state and compared them with measurements after blue light illumination. Applying SAXS would greatly complement TRX data and would help to understand the entire signaling process of PAC.
DOI: 10.15151/esrf-es-1131557087
title: Multi-scale Multi-techniques investigations of Li-ion batteries: towards a European Battery Hub

description: In this science-driven Long-Term proposal, we propose a 3-years multi-beamline program tackling grand challenges for actual, emerging and future battery technologies. We will deploy advanced methodologies for accelerating research by setting new cooperation modes for multi-techniques multi-scale studies. Three chemistry-neutral scientific cases have been identified to fulfil this LTP: bulk-to-surface mechanisms, high energy system and smart sensing. Multiple, time-coordinated, interoperable spectroscopic, imaging & scattering techniques will be implemented. This proposal is the Pilot Phase towards a European Battery Hub aiming at accelerating workflows in battery research by optimizing the exceptional diversity of means available at ESRF. We expect to demonstrate the added value of a new “proposal” mechanism, e.g. science-driven beamtime allocation group, serving the fast growing, highly competitive and rapidly evolving European battery community.
DOI: 10.15151/esrf-es-1196500714
title: Synthesis of Rare-Earth Carbides at High-Pressure in Laser-Heated DACs

description: Carbides form a family of compounds important in science and technology due to their interesting chemical, mechanical, electrical, magnetic and optical properties. Structural variations as a function of composition and external parameters (pressure and temperature) often result in formation of carbides with various types of chemical bonding, as well as with fascinating crystal chemistry. The high-pressure chemistry and physical properties of rare earth metal carbides are almost unknown. Here we propose to investigate the Ln-C (Ln = La, Gd, Dy, Yb) systems up to 200 GPa by single crystal X-ray diffraction. The diamonds are suggested to be used as the source of carbon (as the most enriched with carbon material). The main objectives of this proposal are a synthesis of new Ln-C compounds at multimegabar pressure, characterization of their crystal chemistry and compressional behaviour, tests of theoretical predictions, and search for regularities in lanthanides carbides chemistry.