cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.yc6r72
title: Occurrence Download

description: A dataset containing 2181 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cryptolestes ferrugineus (Stephens, 1831)"
 ]
}

 The dataset includes 2181 records from 168 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039747-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5df47r
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Puma concolor concolor"
 ]
}

 The dataset includes 14 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0420923-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-59079
title: Redemption tidings, vol. 40, nos. 1-50, 3 Jan. - 25 Dec. 1964

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.6vqpfs
title: Occurrence Download

description: A dataset containing 3193 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nisaetus nanus (Wallace, 1868)"
 ]
}

 The dataset includes 3193 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0398519-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.88qpq4
title: Occurrence Download

description: A dataset containing 1759 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Continent is Europe",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Festuca patzkei Markgr.-Dann."
 ]
}

 The dataset includes 1759 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052900-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-60630
title: Redemption tidings, vol. 41, nos. 1-52, 1 Jan. - 24 Dec. 1965

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.rmtdpa
title: Occurrence Download

description: A dataset containing 15460 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ciconia maguari (Gmelin, 1789)"
 ]
}

 The dataset includes 15460 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051695-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-60452
title: Redemption tidings, vol. 41, nos. 1-52, 1 Jan. - 24 Dec. 1965

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.n3bxje
title: Occurrence Download

description: A dataset containing 1639943 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chloris chloris (Linnaeus, 1758))",
 "HasCoordinate is true",
 "DecimalLatitude is greater than or equal to 29.93667",
 "DecimalLatitude is less than or equal to 51.91193",
 "DecimalLongitude is greater than or equal to -14.67522",
 "DecimalLongitude is less than or equal to 39.79752",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation)",
 "Year is greater than or equal to 1970",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1639943 records from 2679 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039745-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jddze6
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rubus polyoplus W.C.R.Watson"
 ]
}

 The dataset includes 27 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0104614-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ffafym
title: Occurrence Download

description: A dataset containing 4907 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Material citation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is one of (Zero coordinate, Coordinate out of range, Coordinate invalid, Coordinate rounded, Geodetic datum assumed WGS84, Coordinate reprojected, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate accuracy invalid, Coordinate precision/uncertainty mismatch, Footprint SRS invalid, Footprint WKT mismatch, Footprint WKT invalid, Country coordinate mismatch, Country mismatch, Continent coordinate mismatch, Continent country mismatch, Continent invalid, Continent derived from country, Continent derived from coordinates, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Recorded date mismatch, Recorded date invalid, Recorded date unlikely, Taxon match fuzzy, Taxon match aggregate, The scientific name ID was not used in backbone matching, The taxon concept ID was not used in backbone matching, The taxon ID was not used in backbone matching, The scientific name ID was not found in the checklist, The taxon concept ID was not found in the checklist, The taxon ID was not found in the checklist, The scientific name differs on the record from that found in the checklist, Taxon match none, The backbone match found using the taxon IDs differs from what would be found if using the scientific names , Depth not metric, Depth unlikely, Depth min max swapped, Depth non numeric, Elevation unlikely, Elevation min max swapped, Elevation not metric, Elevation non numeric, Modified date invalid, Modified date unlikely, Identified date unlikely, Identified date invalid, Basis of record invalid, Type status invalid, Multimedia date invalid, Multimedia URI invalid, References URI invalid, Error during interpretation, Individual count invalid, Individual count conflicts with occurrence status, Occurrence status unparsable, Occurrence status inferred from individual count, ccurrence status inferred from basis of record, Georeferenced date unlikely, Georeferenced date invalid, Ambiguous institution, Ambiguous collection, Institution match none, Collection match none, Institution match fuzzy, Collection match fuzzy, Institution collection mismatch, Possibly on loan, Different owner institution)",
 "OccurrenceStatus is Present",
 "TaxonKey is Hieracium pilosella L."
 ]
}

 The dataset includes 4907 records from 159 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0104611-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tq4chh
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Schizolaena capuronii Lowry, G.E.Schatz, J.-F.Leroy & A.-E.Wolf"
 ]
}

 The dataset includes 8 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0104612-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.stg5yf
title: Occurrence Download

description: A dataset containing 4600 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Fossil, Human Observation)",
 "TaxonKey is Callorhinchus callorynchus (Linnaeus, 1758)"
 ]
}

 The dataset includes 4600 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0104613-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mvy6nf
title: Occurrence Download

description: A dataset containing 3257038 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PhylumKey is Annelida",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3257038 records from 2028 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0104497-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.11992587.v1
title: Additional file 4 of Exosomal miRNA-128-3p from mesenchymal stem cells of aged rats regulates osteogenesis and bone fracture healing by targeting Smad5

description: Additional file 4. miRNA Array Analysis of Young and Aged Exos.
DOI: 10.6084/m9.figshare.20381274
title: Gapless genome assembly of East Asian finless porpoise, Neophocaena asiaeorientalis sunameri

description: There are the genome sequence, gene set, coding sequence and protein sequence of  Neophocaena asiaeorientalis sunameri.
DOI: 10.21227/rfvf-j182
title: IEEEXtreme 13: Reshuffle Teams

description: This dataset contains a total of 3504 submissions, with 3% correct solutions and 36% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/reshuffle-teams/ See the included PDF document for details about the original challenge.
DOI: 10.6084/m9.figshare.5176978
title: Profiling of oxBS-450K 5-hydroxymethylcytosine in human placenta and brain reveals enrichment at imprinted loci

description: DNA methylation (5-methylcytosine, 5 mC) is involved in many cellular processes and is an epigenetic mechanism primarily associated with transcriptional repression. The recent discovery that 5 mC can be oxidized to 5-hydromethylcytosine (5hmC) by TET proteins has revealed the “sixth base” of DNA and provides additional complexity to what was originally thought to be a stable repressive mark. However, our knowledge of the genome-wide distribution of 5hmC in different tissues is currently limited. Here, we sought to define loci enriched for 5hmC in the placenta genome by combining oxidative bisulphite (oxBS) treatment with high-density Illumina Infinium HumanMethylation450 methylation arrays and to compare our results with those obtained in brain. Despite identifying over 17,000 high-confidence CpG sites with consistent 5hmC enrichment, the distribution of this modification in placenta is relatively sparse when compared to cerebellum and frontal cortex. Supported by validation using allelic T4 β-glucosyltransferase assays we identify 5hmC at numerous imprinted loci, often overlapping regions associated with parent-of-origin allelic 5 mC in both placenta and brain samples. Furthermore, we observe tissue-specific monoallelic enrichment of 5hmC overlapping large clusters of imprinted snoRNAs-miRNAs processed from long noncoding RNAs (lncRNAs) within the <i>DLK1-DIO3</i> cluster on chromosome 14 and <i>SNRPN-UBE3A</i> domain on chromosome 15. Enrichment is observed solely on the transcribed alleles suggesting 5hmC is positively associated with transcription at these loci. Our study provides an extensive description of the 5hmC/5 mC landscape in placenta with our data available at www.humanimprints.net, which represents the most comprehensive resource for exploring the epigenetic profiles associated with human imprinted genes.
DOI: 10.6084/m9.figshare.13565633
title: Additional file 1 of Comparative transcriptome analysis revealed differential gene expression in multiple signaling pathways at flowering in polyploid Brassica rapa

description: Additional file 1: Table S1. Differentially expressed phytohormones. Table S2. Gene related to organ growth. Table S3. Chromosomal loaction of the Flower time genes among the Subgenomes of B. rapa. Table S4. Differentially expressed genes among the floral transitioning pathways. Table S5. Differentially expressed TF. Table S6. Primers pairs used for qRT-PCR.
DOI: 10.6084/m9.figshare.13565633.v1
title: Additional file 1 of Comparative transcriptome analysis revealed differential gene expression in multiple signaling pathways at flowering in polyploid Brassica rapa

description: Additional file 1: Table S1. Differentially expressed phytohormones. Table S2. Gene related to organ growth. Table S3. Chromosomal loaction of the Flower time genes among the Subgenomes of B. rapa. Table S4. Differentially expressed genes among the floral transitioning pathways. Table S5. Differentially expressed TF. Table S6. Primers pairs used for qRT-PCR.
DOI: 10.6084/m9.figshare.9895703
title: Primary immune thrombocytopenia in US clinical practice: incidence and healthcare burden in first 12 months following diagnosis

description: <b>Introduction:</b> Primary immune thrombocytopenia (ITP), an autoimmune disorder characterized by low platelet count, can lead to serious bleeding events. Little is known about the current epidemiology of ITP in the US, and even less is known about the current healthcare burden of ITP, especially in the 12-month period following ITP diagnosis. <b>Method:</b> We used a retrospective cohort design and data from two US private healthcare claims databases (2010–2016) to identify persons with evidence of newly diagnosed ITP. We weighted estimates of the annual incidence of ITP by age and sex to reflect the US population, and summarized healthcare utilization and expenditures (2016 US$) during the first 12 months after ITP diagnosis (“follow-up period”). <b>Results:</b> Annual incidence of ITP in the US was 6.1 per 100,000 persons, higher among females versus males (6.7 vs. 5.5), and highest among children aged 0–4 years (8.1) and adults aged ≥65 years (13.7). Patients with ITP averaged 0.33 (95% CI: 0.32–0.35) hospitalizations and 15.3 (15.1–15.6) ambulatory encounters during the follow-up period; mean total healthcare expenditures during this period were $21,290 (20,502–22,031). Hospitalizations were more common during the first 3 months following diagnosis, and were twice as frequent among children versus adults; expenditures for ambulatory encounters were substantially higher for adults versus children aged 0–4 years. <b>Conclusions:</b> Our findings suggest that nearly 20,000 children and adults are newly diagnosed with ITP each year in the US, substantially higher than previously reported. Among patients requiring formal medical care, the economic burden during the first 12 months following diagnosis is high, with estimated US expenditures totaling over $400 million.
DOI: 10.6084/m9.figshare.9895703.v1
title: Primary immune thrombocytopenia in us clinical practice: incidence and healthcare burden in first 12 months following diagnosis

description: <b>Introduction -</b> Primary immune thrombocytopenia (ITP), an autoimmune disorder characterized by low platelet count, can lead to serious bleeding events. Little is known about the current epidemiology of ITP in the US, and even less is known about the current healthcare burden of ITP, especially in the 12-month period following ITP diagnosis. <b>Method -</b> We used a retrospective cohort design and data from two US private healthcare claims databases (2010-2016) to identify persons with evidence of newly diagnosed ITP. We weighted estimates of the annual incidence of ITP by age and sex to reflect the US population, and summarized healthcare utilization and expenditures (2016 US$) during the first 12 months after ITP diagnosis (“follow-up period”). <b>Results -</b> Annual incidence of ITP in the US was 6.1 per 100,000 persons, higher among females versus males (6.7 vs. 5.5), and highest among children aged 0-4 years (8.1) and adults aged ≥65 years (13.7). Patients with ITP averaged 0.33 (95% CI: 0.32-0.35) hospitalizations and 15.3 (15.1-15.6) ambulatory encounters during the follow-up period; mean total healthcare expenditures during this period were $21,290 (20,502-22,031). Hospitalizations were more common during the first three months following diagnosis, and were twice as frequent among children versus adults; expenditures for ambulatory encounters were substantially higher for adults versus children aged 0-4 years. <b>Conclusions -</b> Our findings suggest that nearly 20,000 children and adults are newly diagnosed with ITP each year in the US, substantially higher than previously reported. Among patients requiring formal medical care, the economic burden during the first 12 months following diagnosis is high, with estimated US expenditures totaling over $400 million.
DOI: 10.6084/m9.figshare.9895703.v2
title: Primary immune thrombocytopenia in US clinical practice: incidence and healthcare burden in first 12 months following diagnosis

description: <b>Introduction:</b> Primary immune thrombocytopenia (ITP), an autoimmune disorder characterized by low platelet count, can lead to serious bleeding events. Little is known about the current epidemiology of ITP in the US, and even less is known about the current healthcare burden of ITP, especially in the 12-month period following ITP diagnosis. <b>Method:</b> We used a retrospective cohort design and data from two US private healthcare claims databases (2010–2016) to identify persons with evidence of newly diagnosed ITP. We weighted estimates of the annual incidence of ITP by age and sex to reflect the US population, and summarized healthcare utilization and expenditures (2016 US$) during the first 12 months after ITP diagnosis (“follow-up period”). <b>Results:</b> Annual incidence of ITP in the US was 6.1 per 100,000 persons, higher among females versus males (6.7 vs. 5.5), and highest among children aged 0–4 years (8.1) and adults aged ≥65 years (13.7). Patients with ITP averaged 0.33 (95% CI: 0.32–0.35) hospitalizations and 15.3 (15.1–15.6) ambulatory encounters during the follow-up period; mean total healthcare expenditures during this period were $21,290 (20,502–22,031). Hospitalizations were more common during the first 3 months following diagnosis, and were twice as frequent among children versus adults; expenditures for ambulatory encounters were substantially higher for adults versus children aged 0–4 years. <b>Conclusions:</b> Our findings suggest that nearly 20,000 children and adults are newly diagnosed with ITP each year in the US, substantially higher than previously reported. Among patients requiring formal medical care, the economic burden during the first 12 months following diagnosis is high, with estimated US expenditures totaling over $400 million.
DOI: 10.6084/m9.figshare.9895712
title: Data from The effect of molecular assembly between collectors and inhibitors on the flotation of pyrite and talc

description: The main tool authors used in this study is origin. The detailed data and figures can be seen in the original data zip. Others not included in this zip were in the manuscript, such as Figure 2 and 10, because authors only have figure forms. Thank you for your understanding very much.
DOI: 10.6084/m9.figshare.9895712.v1
title: Data from The effect of molecular assembly between collectors and inhibitors on the flotation of pyrite and talc

description: The main tool authors used in this study is origin. The detailed data and figures can be seen in the original data zip. Others not included in this zip were in the manuscript, such as Figure 2 and 10, because authors only have figure forms. Thank you for your understanding very much.
DOI: 10.5281/zenodo.10720016
title: Dataset: Plant Growth Promotion (PGP) Bacterial Genes

description: This dataset comprises a collection of bacterial genes recognized for their role in promoting plant growth, as supported by literature sources. These genes play crucial roles in enhancing various aspects of plant growth and development, including nutrient uptake, hormone synthesis, stress tolerance and other traits. The sequences provided here are valuable resources for studying the mechanisms of bacterial-mediated plant growth promotion.
DOI: 10.5281/zenodo.10720017
title: Dataset: Plant Growth Promotion (PGP) Bacterial Genes

description: This dataset comprises a collection of bacterial genes recognized for their role in promoting plant growth, as supported by literature sources. These genes play crucial roles in enhancing various aspects of plant growth and development, including nutrient uptake, hormone synthesis, stress tolerance and other traits. The sequences provided here are valuable resources for studying the mechanisms of bacterial-mediated plant growth promotion.
DOI: 10.6084/m9.figshare.13565853
title: Additional file 6 of Malonyl-proteome profiles of Staphylococcus aureus reveal lysine malonylation modification in enzymes involved in energy metabolism

description: Additional file 6: Table S1. Annotated MS/MS spectra of malonylated peptides and sites in Staphylococcus aureus.
DOI: 10.6084/m9.figshare.13565853.v1
title: Additional file 6 of Malonyl-proteome profiles of Staphylococcus aureus reveal lysine malonylation modification in enzymes involved in energy metabolism

description: Additional file 6: Table S1. Annotated MS/MS spectra of malonylated peptides and sites in Staphylococcus aureus.
DOI: 10.6084/m9.figshare.13565856
title: Additional file 7 of Malonyl-proteome profiles of Staphylococcus aureus reveal lysine malonylation modification in enzymes involved in energy metabolism

description: Additional file 7: Table S2. Domain enrichment analysis of proteins corresponding to modification sites in Staphylococcus aureus.
DOI: 10.6084/m9.figshare.13565856.v1
title: Additional file 7 of Malonyl-proteome profiles of Staphylococcus aureus reveal lysine malonylation modification in enzymes involved in energy metabolism

description: Additional file 7: Table S2. Domain enrichment analysis of proteins corresponding to modification sites in Staphylococcus aureus.
DOI: 10.6084/m9.figshare.13565859
title: Additional file 8 of Malonyl-proteome profiles of Staphylococcus aureus reveal lysine malonylation modification in enzymes involved in energy metabolism

description: Additional file 8: Table S3. Conservative analysis of the identified malonylated sites in Staphylococcus aureus and previously reported E. coli malonylomes.
DOI: 10.6084/m9.figshare.13565859.v1
title: Additional file 8 of Malonyl-proteome profiles of Staphylococcus aureus reveal lysine malonylation modification in enzymes involved in energy metabolism

description: Additional file 8: Table S3. Conservative analysis of the identified malonylated sites in Staphylococcus aureus and previously reported E. coli malonylomes.
DOI: 10.6084/m9.figshare.13565862
title: Additional file 9 of Malonyl-proteome profiles of Staphylococcus aureus reveal lysine malonylation modification in enzymes involved in energy metabolism

description: Additional file 9 Table S4. Standardization of protein concentration.
DOI: 10.6084/m9.figshare.13565862.v1
title: Additional file 9 of Malonyl-proteome profiles of Staphylococcus aureus reveal lysine malonylation modification in enzymes involved in energy metabolism

description: Additional file 9 Table S4. Standardization of protein concentration.