cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12307646
title: Metadata - Microbiota sequences from a blue tit trophic network

description: This dataset contains the metadata file <b>trophicLevel_microbiota_metadata.txt</b>- a tab-delimited text file with host type identity, sequencing run information, and sampling location for each sample. The columns of the text file include a sample identifier (sample_names) which is identical to the first part of the corresponding file names; the sampling site (valley, forest_stand, population, site, and nest_box); the host type of the microbiota sample (host_type) which is ether adult, male, female, and chick for blue tit fecal samples, caterpillar, and leaf; the sample type(sample_type) which is ether experimental sample negative, or positive controls; and the sequencing run (run). Data collection procedures and information on barcode sequences are described in the manuscript "Microbiota similarity between predators and prey in a blue tit trophic network" by Dion-Phénix et al. (manuscript submitted at <i>The ISME Journal</i>).
DOI: 10.6084/m9.figshare.12307643.v1
title: Poster Data Mining 14036891.xlsx

description: Dataset required for Social Media and Web Science (Poster Assignment)
DOI: 10.6084/m9.figshare.12307631
title: Dataset for evaluation the Discovery of Automatable Routines from User Interaction Logs

description: This is the set of user interaction logs used to evalution the approach proposed in the thesis: "Discovering Automatable Routines from UI Logs via Sequential Pattern Mining".
DOI: 10.6084/m9.figshare.12307646.v2
title: Metadata - Microbiota sequences from a blue tit trophic network

description: This dataset contains the metadata file <b>trophicLevel_microbiota_metadata.txt</b>- a tab-delimited text file with host type identity, sequencing run information, and sampling location for each sample. The columns of the text file include a sample identifier (sample_names) which is identical to the first part of the corresponding file names; the sampling site (valley, forest_stand, population, site, and nest_box); the host type of the microbiota sample (host_type) which is ether adult, male, female, and chick for blue tit fecal samples, caterpillar, and leaf; the sample type(sample_type) which is ether experimental sample negative, or positive controls; and the sequencing run (run). Data collection procedures and information on barcode sequences are described in the manuscript "Microbiota similarity between predators and prey in a blue tit trophic network" by Dion-Phénix et al. (manuscript submitted at <i>The ISME Journal</i>).
DOI: 10.6084/m9.figshare.12307700.v1
title: Density Functional Theory-based Electric Field Gradient Database

description: The deviation of the electron density around the nuclei from spherical symmetry determines the electric field gradient (EFG), which can be measured by various types of spectroscopy. Nuclear Quadrupole Resonance (NQR) is particularly sensitive to the EFG. The EFGs, and by implication NQR frequencies, vary dramatically across materials. Consequently, searching for NQR spectral lines in previously uninvestigated materials represents a major challenge. Calculated EFGs can significantly aid at the search’s inception. To facilitate this task, we have applied high-throughput density functional theory calculations to predict EFGs for 15187 materials in the JARVIS-DFT database. This database, which will include EFG as a standard entry, is continuously increasing. Given the large scope of the database, it is impractical to verify each calculation. However, we assess accuracy by singling out cases for which reliable experimental information is readily available and compare them to the calculations. We further present a statistical analysis of the results. The database and tools associated with our work are made publicly available by JARVIS-DFT (https://www.ctcms.nist.gov/~knc6/JVASP.html) and NIST-JARVIS API (http://jarvis.nist.gov/).
DOI: 10.6084/m9.figshare.12307646.v1
title: Metadata - Microbiota sequences from a blue tit trophic network

description: Bacterial 16S rRNA gene sequence data (chloroplast-excluding primers 799f/1115r) and metadata for bacterial communities sampled from leaves from 1) leaves from two oak species (<i>Quercus ilex</i> and <i>Quercus pubescens</i>), 2) leaf-feeding caterpillars and 3) blue tit (<i>Cyanistes caeruleus oligastra</i>) feces, in nine study sites in Corsica Island, France. Data collection procedures and information on barcode sequences are described in the manuscript "Microbiota similarity between predators and prey in a blue tit trophic network" by Dion-Phénix et al. (manuscript submitted at <i>The ISME Journal</i>). Multiple sets of files are included in this data archive: <b>trophicLevel_microbiota_metadata.txt</b> - a tab-delimited text file with host type identity, sequencing run information, and sampling location for each sample. The columns of the text file include a sample identifier (sample_names) which is identical to the first part of the corresponding file names; the sampling site (valley, forest_stand, population, site, and nest_box); the host type of the microbiota sample (host_type) which is ether adult, male, female, and chick for blue tit fecal samples, caterpillar, and leaf; the sample type(sample_type) which is ether experimental sample negative, or positive controls; and the sequencing run (run). <b>sample-names_xx_.fastq.gz</b> - raw sequence data in FASTQ format, produced by a sequencing run using Illumina MiSeq sequencing technology.
DOI: 10.6084/m9.figshare.12307556
title: ThL fractures

description: Comparative analysis of retrospective cohort (open Vs MIS)
DOI: 10.6084/m9.figshare.12307559
title: Reddit Data - Social Media - 19038118.xlsx

description: Poster presentation Data repository<br>
DOI: 10.6084/m9.figshare.12307631.v1
title: Dataset for evaluation the Discovery of Automatable Routines from User Interaction Logs

description: This is the set of user interaction logs used to evalution the approach proposed in the thesis: "Discovering Automatable Routines from UI Logs via Sequential Pattern Mining".
DOI: 10.6084/m9.figshare.12307523
title: maker.max_build.5sep16.gff.gz

description: Maker annotation file for Koala genome assembly phaCin_unsw_v4.1<br>
DOI: 10.6084/m9.figshare.12307523.v1
title: maker.max_build.5sep16.gff.gz

description: Maker annotation file for Koala genome assembly phaCin_unsw_v4.1<br>
DOI: 10.6084/m9.figshare.12307559.v1
title: Reddit Data - Social Media - 19038118.xlsx

description: Poster presentation Data repository<br>
DOI: 10.6084/m9.figshare.12307487
title: 18045690 Dataset UFCFJJ15M.xlsx

description: Data set created using the TAGS worksheet for UFCFJJ-15-M Social Media and Web Science 2020 Assignment 2. UWE.18045690.
DOI: 10.6084/m9.figshare.12307487.v1
title: 18045690 Dataset UFCFJJ15M.xlsx

description: Data set created using the TAGS worksheet for UFCFJJ-15-M Social Media and Web Science 2020 Assignment 2. UWE.18045690.
DOI: 10.6084/m9.figshare.12307433
title: Epicardial fat-secretome from heart failure

description: Proteomics. Released proteins of epicardial adipose tissue from patients with Heart Failure.
DOI: 10.6084/m9.figshare.12307037
title: Table 2

description: The number of individuals an isoform was present in and the median isoform fraction of that isoform for a population of Populus deltoides.<br>
DOI: 10.6084/m9.figshare.12304151
title: Data S2 Crab Size from Juvenile Dungeness crabs (<i>Metacarcinus magister</i>) selectively integrate and modify the fatty acids of their experimental diets

description: Size (carapace widths, mm) of experimental crabs.
DOI: 10.6084/m9.figshare.12307037.v1
title: Table 2

description: The number of individuals an isoform was present in and the median isoform fraction of that isoform for a population of Populus deltoides.<br>
DOI: 10.6084/m9.figshare.12307124
title: bp_data.xlsx

description: Data from anthropometric and body composition analysis in CP-Football athletes.
DOI: 10.6084/m9.figshare.12304148
title: Data S1 Crab FA Proportion from Juvenile Dungeness crabs (<i>Metacarcinus magister</i>) selectively integrate and modify the fatty acids of their experimental diets

description: Proportion data (% of all FA identified) for experimental crabs and their foods.
DOI: 10.6084/m9.figshare.12304148.v1
title: Data S1 Crab FA Proportion from Juvenile Dungeness crabs (<i>Metacarcinus magister</i>) selectively integrate and modify the fatty acids of their experimental diets

description: Proportion data (% of all FA identified) for experimental crabs and their foods.
DOI: 10.6084/m9.figshare.12304151.v1
title: Data S2 Crab Size from Juvenile Dungeness crabs (<i>Metacarcinus magister</i>) selectively integrate and modify the fatty acids of their experimental diets

description: Size (carapace widths, mm) of experimental crabs.
DOI: 10.6084/m9.figshare.12307124.v2
title: bp_data.xlsx

description: Data from anthropometric and body composition analysis in CP-Football athletes.
DOI: 10.6084/m9.figshare.12303818
title: Supplementary Document 3 from Dynamics of diet-egg transfer of fatty acids in the teleost fish, red drum (<i>Sciaenops ocellatus</i>)

description: Fatty acid profiles of items used to compose broodstock diets.
DOI: 10.6084/m9.figshare.12303824
title: Supplementary Document 2 from Dynamics of diet-egg transfer of fatty acids in the teleost fish, red drum (<i>Sciaenops ocellatus</i>)

description: Fatty acid profiles of red drum spawns collected for (a) lag analysis and (b) incorporation rate analysis
DOI: 10.6084/m9.figshare.12303830
title: Supplementary Document 1 from Dynamics of diet-egg transfer of fatty acids in the teleost fish, red drum (<i>Sciaenops ocellatus</i>)

description: Daily feeding record for red drum broodstock tanks that were used in the (a) lag analysis and (b) incorporation rate analysis.
DOI: 10.6084/m9.figshare.12303242
title: monument_300_model.zip

description: NSpM trained monument neural model 300<br>
DOI: 10.6084/m9.figshare.12303818.v1
title: Supplementary Document 3 from Dynamics of diet-egg transfer of fatty acids in the teleost fish, red drum (<i>Sciaenops ocellatus</i>)

description: Fatty acid profiles of items used to compose broodstock diets.
DOI: 10.6084/m9.figshare.12307124.v1
title: bp_data.xlsx

description: Data from anthropometric and body composition analysis in CP-Football athletes.
DOI: 10.6084/m9.figshare.12303242.v1
title: monument_300_model.zip

description: NSpM trained monument neural model 300<br>
DOI: 10.6084/m9.figshare.12303824.v1
title: Supplementary Document 2 from Dynamics of diet-egg transfer of fatty acids in the teleost fish, red drum (<i>Sciaenops ocellatus</i>)

description: Fatty acid profiles of red drum spawns collected for (a) lag analysis and (b) incorporation rate analysis
DOI: 10.6084/m9.figshare.12303830.v2
title: Supplementary Document 1 from Dynamics of diet-egg transfer of fatty acids in the teleost fish, red drum (<i>Sciaenops ocellatus</i>)

description: Daily feeding record for red drum broodstock tanks that were used in the (a) lag analysis and (b) incorporation rate analysis.
DOI: 10.6084/m9.figshare.12303830.v1
title: Supplementary Document 1 from Dynamics of diet-egg transfer of fatty acids in the teleost fish, red drum (<i>Sciaenops ocellatus</i>)

description: Daily feeding record for red drum broodstock tanks that were used in the (a) lag analysis and (b) incorporation rate analysis.
DOI: 10.6084/m9.figshare.12302933
title: QFASA Inputs from Dietary fat concentrations influence fatty acid assimilation patterns in Atlantic pollock (<i>Pollachius virens)</i>

description: Summarizes the approach used in the modelling and includes FA composition of fish, diets and prey library.
DOI: 10.6084/m9.figshare.12302933.v1
title: QFASA Inputs from Dietary fat concentrations influence fatty acid assimilation patterns in Atlantic pollock (<i>Pollachius virens)</i>

description: Summarizes the approach used in the modelling and includes FA composition of fish, diets and prey library.
DOI: 10.6084/m9.figshare.12302828
title: Seed component mass of 940 species

description: "SCR data - final (NPH 940 species).xlsx"Data used in the paper "Macroevolutionary patterns in seed component mass and different evolutionary trajectories across seed desiccation responses"
DOI: 10.6084/m9.figshare.12302795
title: Fatty Acid Database from Unlocking the power of fatty acids as dietary tracers and metabolic signals in fishes and aquatic invertebrates

description: Database of controlled feeding studies for fishes and aquatic invertebrates
DOI: 10.6084/m9.figshare.12302795.v1
title: Fatty Acid Database from Unlocking the power of fatty acids as dietary tracers and metabolic signals in fishes and aquatic invertebrates

description: Database of controlled feeding studies for fishes and aquatic invertebrates
DOI: 10.6084/m9.figshare.12302828.v1
title: SCR data - final (NPH 940 species)

description: Data used in the paper "Macroevolutionary patterns in seed component mass and different evolutionary trajectories across seed desiccation responses"
DOI: 10.6084/m9.figshare.12302672
title: CASPER SWAT data.csvCASPER SWAT recruitment data and evaluated information sheets

description: CASPER SWAT recruitment data
DOI: 10.6084/m9.figshare.12302585

description: GSE107294_mm10_alignedPU ChIPseq RANKL 72hPU ChIPseq RANKL 36hPU ChIPseq MP (myeloid precursors)MITF ChIPseq RANKL 72hMITF ChIPseq RANKL 36hMITF ChIPseq MP (myeloid precursors)
DOI: 10.6084/m9.figshare.12302564
title: Metadata record for: Vertical datum transformation grids for Mexico

description: This dataset contains key characteristics about the data described in the Data Descriptor Vertical datum transformation grids for Mexico. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.12302585.v1
title: GSE107294_mm10_aligned

description: GSE107294_mm10_alignedPU ChIPseq RANKL 72hPU ChIPseq RANKL 36hPU ChIPseq MP (myeloid precursors)MITF ChIPseq RANKL 72hMITF ChIPseq RANKL 36hMITF ChIPseq MP (myeloid precursors)
DOI: 10.6084/m9.figshare.12302564.v1
title: Metadata record for: Vertical datum transformation grids for Mexico

description: This dataset contains key characteristics about the data described in the Data Descriptor Vertical datum transformation grids for Mexico. <br> Contents: <br> 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format
DOI: 10.6084/m9.figshare.12302531
title: Table 9.XLSX

description: DAVID enrichment of genes with RNA recognition motifs with micro RNA binding sites affected by alternative splicing in Populus deltoides. <br>
DOI: 10.6084/m9.figshare.12302534
title: Table 7.XLSX

description: Genes with micro RNA binding sites affected by alternative splicing relative to the longest or most expressed isoform of a gene in Populus deltoides. Additionally the genes the overlap the two sets. <br>
DOI: 10.6084/m9.figshare.12302537
title: Table 4.XLSX

description: Protein domains affected by alternative splicing relative to the longest and most expressed isoform of a gene in a population of Populus deltoides. Additionally a tab is included for the genes that overlap the two datasets. <br>
DOI: 10.6084/m9.figshare.12302528
title: Table 6.XLSX

description: DAVID enrichment RNA recognition motifs of genes with protein domains affected by alternative splicing. <br>
DOI: 10.6084/m9.figshare.12302531.v1
title: Table 9.XLSX

description: DAVID enrichment of genes with RNA recognition motifs with micro RNA binding sites affected by alternative splicing in Populus deltoides. <br>
DOI: 10.6084/m9.figshare.12302537.v1
title: Table 4.XLSX

description: Protein domains affected by alternative splicing relative to the longest and most expressed isoform of a gene in a population of Populus deltoides. Additionally a tab is included for the genes that overlap the two datasets. <br>
DOI: 10.6084/m9.figshare.12302525
title: Table 5.XLSX

description: Popgenie enrichment of genes with protein domains affected by alternative splicing relative to the longest or most expressed isoform of a gene in Populus deltoides. Additionally a tab for the enrichment of the genes overlapping between the two sets. <br>
DOI: 10.6084/m9.figshare.12302519
title: Table 8.XLSX

description: Popgenie enrichment of gene with micro RNA binding sites affected by alternative splicing relative to the longest or most expressed isoform of a gene in Populus deltoides. Additionally the Popgenie enrichment for genes overlapping between the two set. <br>
DOI: 10.6084/m9.figshare.12302522
title: Table 3.XLSX

description: Matrix of isoform expression values for a population of Populus deltoides.<br>
DOI: 10.6084/m9.figshare.12302525.v1
title: Table 5.XLSX

description: Popgenie enrichment of genes with protein domains affected by alternative splicing relative to the longest or most expressed isoform of a gene in Populus deltoides. Additionally a tab for the enrichment of the genes overlapping between the two sets. <br>
DOI: 10.6084/m9.figshare.12302528.v1
title: Table 6.XLSX

description: DAVID enrichment RNA recognition motifs of genes with protein domains affected by alternative splicing. <br>
DOI: 10.6084/m9.figshare.12302519.v1
title: Table 8.XLSX

description: Popgenie enrichment of gene with micro RNA binding sites affected by alternative splicing relative to the longest or most expressed isoform of a gene in Populus deltoides. Additionally the Popgenie enrichment for genes overlapping between the two set. <br>
DOI: 10.6084/m9.figshare.12302264
title: Supplementary File 2.xlsx
DOI: 10.6084/m9.figshare.12302267
title: Supplementary File 1.xlsx

description: Arabidopsis blast hits of novel transcripts identified in a population-scale transcriptome of Populus deltoides.<br>
DOI: 10.6084/m9.figshare.12302264.v1
title: Supplementary File 2.xlsx

description: Protein domains affected by alternative splicing in a population of Populus deltoides relative to the longest and most highly expressed isoform of a gene. Additional a tab is included for the domain changes that overlap between the datasets of changes relative to the longest and most highly expressed isoform of a gene. <br>
DOI: 10.6084/m9.figshare.12302243
title: San Francisco taxi trajectories

description: A CSV dataset containing taxi trajectories recorded over 25 days (from 2008/05/17 to 2008/06/10) in the San Francisco Bay area.<br>The dataset is derived from the <i> "The epfl/mobility dataset"</i>,<i> </i>available at https://crawdad.org/epfl/mobility/20090224/.<i><br></i>Each CSV row contains:<br>- <b>taxi_id</b>: numeric value identifying an involved taxi;- <b>trajectory_id</b>: numeric value identifying a trajectory in the original dataset;- <b>timestamp</b>: a timestamp corresponding to the starting time of the taxi ride;- <b>source_point</b>: GPS point representing the origin of the taxi ride;<br>- <b>target_point</b>: GPS point representing the destination of the taxi ride;<i> </i><i><br></i><i><br></i>Coordinates are given in POINT(longitude latitude) format using the EPSG:4326 Geodetic coordinate system.
DOI: 10.6084/m9.figshare.12302267.v1
title: Supplementary File 1.xlsx

description: Protein domains affected by alternative splicing in Populus deltoides relative to the longest or most highly expressed isoform. Also includes a tab for the domains which that overlap between the datasets relative to the longest and most expressed isoform. <br>
DOI: 10.6084/m9.figshare.12302216
title: Pliocene (PlioMIP1 experiment 2)

description: LPJ-GUESS model outputs forced with Pliocene (PlioMIP1 experiment 2) climate fields.
DOI: 10.6084/m9.figshare.12302228.v1
title: IPSL-CM5A-LR Pliocene (PlioMIP2 EOI400)

description: LPJ-GUESS model outputs forced with IPSL-CM5A-lR Pliocene (PlioMIP2 EOI400) climate fields.
DOI: 10.6084/m9.figshare.12302228
title: Pliocene (PlioMIP2 EOI400)

description: LPJ-GUESS model outputs forced with Pliocene (PlioMIP2 EOI400) climate fields.
DOI: 10.6084/m9.figshare.12302165
title: Porto taxi trajectories

description: A CSV dataset containing 1710671 taxi trajectories recorded over one year (from 2013/07/01 to 2014/06/30) in the city of Porto, in Portugal.<br>The dataset is derived from the <i> "Taxi Service Trajectory - Prediction Challenge, ECML PKDD 2015 Data Set".</i><i><br></i>Each CSV row contains:<br>- <b>taxi_id</b>: numeric value identifying an involved taxi;- <b>trajectory_id</b>: numeric value identifying a trajectory in the original dataset;- <b>timestamp</b>: a timestamp corresponding to the starting time of the taxi ride;- <b>source_point</b>: GPS point representing the origin of the taxi ride;<br>- <b>target_point</b>: GPS point representing the destination of the taxi ride;<i> </i><i><br></i><i><br></i>Coordinates are given in POINT(longitude latitude) format using the EPSG:4326 Geodetic coordinate system.
DOI: 10.6084/m9.figshare.12302216.v1
title: IPSL-CM5A-LR Pliocene (PlioMIP1 experiment 2)

description: LPJ-GUESS model outputs forced with IPSL-CM5A-lR Pliocene (PlioMIP1 experiment 2) climate fields.
DOI: 10.6084/m9.figshare.12302198
title: GSM3753009_H3K27me3_E13Sox9_cat.bw

description: H3K27me3 ChIPseq E13.5 Sox9+ gonadal somatic cells
DOI: 10.6084/m9.figshare.12302198.v1
title: GSM3753009_H3K27me3_E13Sox9_cat.bw

description: H3K27me3 ChIPseq E13.5 Sox9+ gonadal somatic cells
DOI: 10.6084/m9.figshare.12302216.v2
title: Pliocene (PlioMIP1 experiment 2)

description: LPJ-GUESS model outputs forced with Pliocene (PlioMIP1 experiment 2) climate fields.
DOI: 10.6084/m9.figshare.12302096
title: Interproscan results

description: Interproscan results
DOI: 10.6084/m9.figshare.12302096.v1
title: Interproscan results

description: Interproscan results
DOI: 10.6084/m9.figshare.12302216.v3
title: Pliocene (PlioMIP1 experiment 2)

description: LPJ-GUESS model outputs forced with Pliocene (PlioMIP1 experiment 2) climate fields.
DOI: 10.6084/m9.figshare.12302015
title: RNAi component survey in P. bursaria

description: This data relates to Dataset S1 of Jenkins et al. 2020 "Emergent RNA-RNA interactions can promote stability in a nascent phototrophic endosymbiosis". <br><br>Data corresponds to the amino acid sequence data used to identify the presence or absence of annotated RNAi pathway components in <i>P. bursaria</i>.
DOI: 10.6084/m9.figshare.12302201
title: piControl

description: LPJ-GUESS model outputs forced with piControl climate fields.<br>
DOI: 10.6084/m9.figshare.12302201.v3
title: piControl

description: LPJ-GUESS model outputs forced with piControl climate fields.<br>
DOI: 10.6084/m9.figshare.12301760
title: DNA-based taxonomy and potential suppression of long-established names: the case of <i>Telegonus fulgerator</i> (Lepidoptera: Hesperiidae)

description: DNA data consisting of a short segment of the mitochondrial cytochrome <i>c</i> oxidase subunit 1 gene (COI, or <i>cox1</i>), the standard barcode segment, have previously provided evidence that the butterfly taxon <i>Telegonus fulgerator</i> (Hesperiidae: Eudaminae) is actually comprised of a complex of at least 10 cryptic species presently referred to as the ‘fulgerator complex’. Because the 10 putative species, each with a type specimen and type locality, were diagnosed solely on the basis of nucleotide characters of the COI barcode, and because a barcode is not available from the type of the nominal taxon, the naming of the 10 species has rendered <i>T. fulgerator</i> a <i>nomen dubium</i>. Here we provide an historical background on the nomenclature of <i>T. fulgerator</i>, and propose a neotype in order to stabilize a name that has been in use for almost 250<b> </b>years. We also summarize the few data available on geographic distributions and probable dispersal scenarios of several of the cryptic species of the fulgerator complex based on publicly available barcodes.