cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.60756/euc-uatz37h429
title: Cyclic quasi-static in-plane and dynamic shake table out-of-plane tests on masonry infills

description: Masonry infills are commonly integrated into reinforced concrete (RC) and steel-framed buildings, but despite usually being regarded as non-structural, they are vulnerable to seismic actions. While extensive research has been conducted on their seismic behaviour, further investigation into their dynamic response is necessary. Particularly, there is ongoing debate regarding the impact of in-plane damage on the out-of-plane dynamic behaviour of weak masonry infills. To address this issue, an experimental campaign was carried out at the Eucentre Foundation, focusing on horizontal hollowed clay masonry infills, each 12 cm thick. These infills were installed within a steel-concrete frame. The experimental campaign comprised in-plane tests and dynamic out-of-plane tests conducted on a shaking table until infill collapse. The out-of-plane tests were performed with and without previous in-plane loading. The objective was to analyse the infills' response in both in-plane and out-of-plane directions, along with their interaction, by focusing on the out-of-plane dynamic response. The experiments yielded significant findings, including insights into damage propagation and failure mechanisms, in-plane force-displacement relationships, and out-of-plane acceleration and displacement profiles.
DOI: 10.15468/dl.tw9p97
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Closterium abruptum West",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((30.0251 -31.3959,30.5701 -30.7329,30.5701 -28.5786,25.5395 -28.5786,25.5395 -32.9007,28.2048 -32.9007,28.5753 -32.6569,29.4902 -31.7517,30.0251 -31.3959))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042540-250525065834625/datasets/export for details.
DOI: 10.15468/dl.9wv4e3
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Juncus lomatophyllus Spreng.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((30.0251 -31.3959,30.5701 -30.7329,30.5701 -28.5786,25.5395 -28.5786,25.5395 -32.9007,28.2048 -32.9007,28.5753 -32.6569,29.4902 -31.7517,30.0251 -31.3959))"
 ]
}

 The dataset includes 114 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042541-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/3sf9t4cx5n
title: Significance and interaction contribution of slope gradient and soil bulk density to erosion

description: Significance and interaction contribution of slope gradient and soil bulk density to erosion
DOI: 10.17632/3sf9t4cx5n.1
title: Significance and interaction contribution of slope gradient and soil bulk density to erosion

description: Significance and interaction contribution of slope gradient and soil bulk density to erosion
DOI: 10.17632/yjkdhtcdr6
title: Data: Rotational Dynamic of Methylen-Group in Benzylic Derivatives: Intramolecular Non-covalent Bindings Driven Conformational Restriction

description: Herein we provided a general and consistent perspective of the rotational dynamic of methylene-group in benzylic derivatives from experimental and theoretical analysis. Different conformational states including the most stable conformation were recognized from DFT-calculations. Further calculations showed that the most stable conformation of the benzylic-amine and benzylic-alcohol compounds was defined by the existence of an intramolecular binding between the benzylic-amine substitution and ortho- substitution such as halogen, hydrogen or nucleophile-π binding. Neither type of intramolecular interaction was identified from benzyl-bromide compounds. Energetically, the rotational barrier of the methylene-group was increased as function of the nature of the ortho-substitution as follows: 2,6-dibrominated˃˃ 2-iodinated ~ 2-brominated˃ 2-arylated≥ 2,6-unsubstituted˃ 2-fluorinated. Experimentally, in solid-state, structural aspects such as the most preferred conformation state or intramoelcular binding were supported by X-ray studies. In solution, scalar correlations between the methylene-hydrogens with the vicinal ortho- or meta-protons from a simple 1H/1H-COSY measurement allowed us to confirm the most stable conformation for the studied benzylic compounds as well as to give a general draw about the rotational dynamic of the methylene-group in these benzylic compounds. From the benzyl-amines, the 2,6-dibrominated showed the strongest H-H correlations, followed by the 2-iodinated and 2-brominated compounds, whereas the 2-arylated, 2,6-unsubstituted and 2-fluorinated showed a discrete or null H-H correlations. All studied benzyl-bromides did not show H-H correlations. All these findings revealed that the rotation of the methylene-group is restricted by steric hindrance derived from ortho-substituent as well as by the existence of an intramolecular binding involving the benzyl-substituent, being this last the most determinant factor, although the co-existence of both factors restricted even more the free rotation of methylene-group.

The data include a detailed theoretical output concerning structure optimization, conformational analysis (scans), NBO calculations, X-ray data and NMR data for most of 40 compounds. Some figure and graphic, which are found in the manuscript and supporting Information material, can be found.
DOI: 10.17632/yjkdhtcdr6.1
title: Data: Rotational Dynamic of Methylen-Group in Benzylic Derivatives: Intramolecular Non-covalent Bindings Driven Conformational Restriction

description: Herein we provided a general and consistent perspective of the rotational dynamic of methylene-group in benzylic derivatives from experimental and theoretical analysis. Different conformational states including the most stable conformation were recognized from DFT-calculations. Further calculations showed that the most stable conformation of the benzylic-amine and benzylic-alcohol compounds was defined by the existence of an intramolecular binding between the benzylic-amine substitution and ortho- substitution such as halogen, hydrogen or nucleophile-π binding. Neither type of intramolecular interaction was identified from benzyl-bromide compounds. Energetically, the rotational barrier of the methylene-group was increased as function of the nature of the ortho-substitution as follows: 2,6-dibrominated˃˃ 2-iodinated ~ 2-brominated˃ 2-arylated≥ 2,6-unsubstituted˃ 2-fluorinated. Experimentally, in solid-state, structural aspects such as the most preferred conformation state or intramoelcular binding were supported by X-ray studies. In solution, scalar correlations between the methylene-hydrogens with the vicinal ortho- or meta-protons from a simple 1H/1H-COSY measurement allowed us to confirm the most stable conformation for the studied benzylic compounds as well as to give a general draw about the rotational dynamic of the methylene-group in these benzylic compounds. From the benzyl-amines, the 2,6-dibrominated showed the strongest H-H correlations, followed by the 2-iodinated and 2-brominated compounds, whereas the 2-arylated, 2,6-unsubstituted and 2-fluorinated showed a discrete or null H-H correlations. All studied benzyl-bromides did not show H-H correlations. All these findings revealed that the rotation of the methylene-group is restricted by steric hindrance derived from ortho-substituent as well as by the existence of an intramolecular binding involving the benzyl-substituent, being this last the most determinant factor, although the co-existence of both factors restricted even more the free rotation of methylene-group.

The data include a detailed theoretical output concerning structure optimization, conformational analysis (scans), NBO calculations, X-ray data and NMR data for most of 40 compounds. Some figure and graphic, which are found in the manuscript and supporting Information material, can be found.
DOI: 10.17632/ymyytrghb9
title: Flea-small mammal interactions in 108 regions from six biogeographic realms

description: Interaction presence-absence matrices for fleas parasitic on small mammalian hosts
DOI: 10.17632/ymyytrghb9.2
title: Flea-small mammal interactions in 108 regions from six biogeographic realms

description: Interaction presence-absence matrices for fleas parasitic on small mammalian hosts
DOI: 10.17632/y2t3cgwnr2.2
title: Data for: Predicting the spatial distribution of invasive species richness using the combination of machine learning and geostatistical algorithms

description: This dataset is the original data of the paper “Predicting the spatial distribution of invasive species richness using the combination of machine learning and geostatistical algorithms” .The dataset includes forest survey data, eco-climatic data, and topographic and geomorphological data. Among them, the forest survey data comes from the US Forest Inventory and Analysis (FIA) program, which collects information on the occurrence and distribution of invasive plants in all public and private forests in the United States. The ecological and climatic data includes 31 climatic variables, extracted from the WorldClim Global Climate Data (Version 2.1, https://www.worldclim.org/data/worldclim21.html). The topographic and geomorphological data includes three variables: elevation, soil carbon content, and aridity index. Among these, the elevation data comes from WorldClim Global Climate Data, soil carbon content data is extracted from the International Soil Reference and Information Centre (ISRIC-World Soil Information, https://www.isric.org/), and the aridity index is extracted from the Global Aridity Index (http://www.cgiar-csi.org/data). The definitions of each variable are as follows:
prov_ID: Eco-region code;
LAT/LON: Decimal latitude/longitude;
Seasonability: SD of mean annual temperature;
Alt: Altitude (m);
PLT_TPA/Tpha: Trees per acre/hectare;
RelDen: Successional development proportion (0–1);
prpfor: Forested plot proportion;
plt_drybio_adj/ha: Native tree biomass (English tons/acre/hectare);
native_spp: Native tree species richness;
PD_all: Phylogenetic diversity of tree species;
PSV_all/var: Phylogenetic variability and variance;
PSR_all/var: Phylogenetic richness and variance;
PSE_all/PSC_all: Phylogenetic evenness/clustering;
InvSpRichness: Invasive species richness;
soilcarbon: 0–20 cm soil carbon content;
aridity: Precipitation/evapotranspiration ratio;
BIO1–BIO19: Standard climatic metrics (e.g., temperature, precipitation);
vaprmin/max/range/avg: Water vapor pressure metrics (kPa);
sradmin/max/range/avg: Solar radiation metrics (KJ/m²/day);
windmin/max/range/avg: Wind speed metrics (m/s).
DOI: 10.35110/f1c7e6a4-7709-4e10-876e-e1182048514f
title: Suivi pluri-annuel des changements morphologiques de l'île de Banneg (archipel de Molène, Finistère) à partir de modèles numériques de terrain (MNT)

description: Etude des changements morphosédimentaires des amas de blocs cyclopéens. Etude rentrant dans le cadre des suivis naturalistes de la Réserve naturelle de la Mer d'Iroise (SEPNB - Bretagne Vivante et PNMI - OFB). Modèles Numériques de Terrain disponibles depuis 2005 avec une fréquence annuelle. 
Objectifs : étudier les changements morphosédimentaires des formes d'accumulation littorales en réponse aux variations climatiques et/ou des conditions météo-marines
DOI: 10.17632/vnbpprr393
title: A screen to identify targeted protein degraders discovers an induced proximity degrader of the oncoprotein SKP2

description: Source data including the Masspec data, unprocessed western blot and gels, and statistical source data for "A screen to identify targeted protein degraders discovers a degrader of the undruggable oncoprotein SKP2 " published in Nature Biotechnology.
DOI: 10.17632/vnbpprr393.1
title: A screen to identify targeted protein degraders discovers an induced proximity degrader of the oncoprotein SKP2

description: Source data including the Masspec data, unprocessed western blot and gels, and statistical source data for "A screen to identify targeted protein degraders discovers a degrader of the undruggable oncoprotein SKP2 " published in Nature Biotechnology.
DOI: 10.48802/owey.ictdknft
title: Thymic output estimated by the amount of T-cell receptor excision circles in the Milieu Intérieur cohort

description: Levels of T-cell receptor excision circles (a surrogate marker of thymopoiesis) were quantified for 979 subjects from the Milieu Intérieur cohort by qPCR on peripheral blood, leading to a dataset of 979 subjects x 20 TREC variables. The data were collected to characterize the variability of thymic function using quantification of T cell receptor excision circles (TRECs) in peripheral blood T cells as a surrogate marker of thymopoiesis.
The dataset includes a txt file containing the processed data, in the form of a matrix with 979 subjects as rows, and 20 TREC measurements as columns.
description: sjTRECs and βTRECs are episomal circular DNAs generated during TCR α and β chain recombination, respectively. sjTREC and βTREC quantification was based on a quantitative PCR of genomic DNA extracted from whole blood, using the Biomark HD system (Fluidigm France, Paris, France). 1 to 2 μg of genomic DNA was preamplified for 3 minutes at 95°C and then 18 cycles of 95°C for 15 seconds, 60°C for 30 seconds and 68°C for 30 seconds, in a 50 μl reaction that contained the primers listed in table S4, 200 μM of each dNTP, 2.5 mM MgSO4 and 1.25 unit of Platinum Taq DNA pol High Fidelity (ThermoFisher Scientific, Courtaboeuf, France) in 1x buffer. Columns of 48.48 Dynamic array IFCs were loaded with 5 μl containing 2.25 μl of a 1/400th dilution of preamplified DNA, 2.5 μl of 2x Takyon Low Rox Probe MM (Eurogentec) and 0.25 μl of sample Loading Reagent and raws with an equal mixture of 2x Assay loading Reagent and 2x Assay Biomark that contains only the 2 primers and the probe specific for each assay. The sum of the 10 βTRECs was multiplied by 1.3 in order to take into account the 3 Dβ-Jβ that were not quantified (Dβ2-Jβ2.5, 2.6 and 2.7). sjTRECs and βTRECs were normalized to 150 000 cells (around 1 μg of DNA) using the Albumin gene quantification. As log10-transformed values of βTRECs (log10 βTRECs) showed a bimodal distribution, we analyzed it as either a binary variable (0 if undetectable; 1 if detectable), or a quantitative variable in donors with detectable βTRECs only (log10 βTRECs>0). When comparing βTRECs and flow cytometry measures, we included donors with levels below detection limit, and put their value at the detection limit. The number of intrathymic division was obtained using the log2 of sjTRECs/βTRECs ratio, and could thus be calculated in donors with detectable βTRECs only. From the 1,000 MI subjects, 979 DNA were available for TREC analysis and 10 were further excluded because of low Albumin quantification (less than 50,000 copies).
DOI: 10.15131/shef.data.29307131
title: Generating time series of synthetic structure factor snapshots (polymeric spinodal decomposition)

description: If cited by a publication co-authored by Matthew Jones (https://orcid.org/0000-0003-2995-8303), this repository contains the raw data required to derive the results in the publication. The <b>'Simulations'</b> folder contains the Julia code we used to simulate spinodal decomposition and dissolution (see comment on line 288). The code uses parallel processing where possible and calculates the power spectrum of the microstructure at regular intervals. We ran the code on Stanage, the University of Sheffield's high-performance computer. We used shell scripts to pass parameter values and implement repeat simulations on different nodes.The <b>'Data'</b> folder contains the time series of power spectrum snapshots from which we generated the synthetic structure factor snapshots. Each text file contains 2001 power spectrum snapshots (saved row-wise). The number of columns corresponds to the number of k-values, which depends on the spatial discretisation, dx, used in the simulations.If more information is required, please contact the corresponding author of the publication that cites this repository. The methodology for generating and using the data should be outlined in the publication. If, for some reason, this is not the case, please refer to Matthew Jones' PhD thesis: https://etheses.whiterose.ac.uk/id/eprint/36503/.Useful links:Stanage HPC documentation: https://docs.hpc.shef.ac.uk/en/latest/stanage/index.html#gsc.tab=0Sheffield RSE: https://rse.shef.ac.uk/Julia: https://julialang.org/Julia CUDA: https://cuda.juliagpu.org/stable/Julia performance tips: https://docs.julialang.org/en/v1/manual/performance-tips/
DOI: 10.15131/shef.data.29307131.v1
title: Generating time series of synthetic structure factor snapshots (polymeric spinodal decomposition)

description: If cited by a publication co-authored by Matthew Jones (https://orcid.org/0000-0003-2995-8303), this repository contains the raw data required to derive the results in the publication. The <b>'Simulations'</b> folder contains the Julia code we used to simulate spinodal decomposition and dissolution (see comment on line 288). The code uses parallel processing where possible and calculates the power spectrum of the microstructure at regular intervals. We ran the code on Stanage, the University of Sheffield's high-performance computer. We used shell scripts to pass parameter values and implement repeat simulations on different nodes.The <b>'Data'</b> folder contains the time series of power spectrum snapshots from which we generated the synthetic structure factor snapshots. Each text file contains 2001 power spectrum snapshots (saved row-wise). The number of columns corresponds to the number of k-values, which depends on the spatial discretisation, dx, used in the simulations.If more information is required, please contact the corresponding author of the publication that cites this repository. The methodology for generating and using the data should be outlined in the publication. If, for some reason, this is not the case, please refer to Matthew Jones' PhD thesis: https://etheses.whiterose.ac.uk/id/eprint/36503/.Useful links:Stanage HPC documentation: https://docs.hpc.shef.ac.uk/en/latest/stanage/index.html#gsc.tab=0Sheffield RSE: https://rse.shef.ac.uk/Julia: https://julialang.org/Julia CUDA: https://cuda.juliagpu.org/stable/Julia performance tips: https://docs.julialang.org/en/v1/manual/performance-tips/
DOI: 10.5284/1130847
title: Digital Archive from a Historic Building Recording at the Spanish City Theatre, Whitley Bay, Tyne and Wear, February to March 2024

description: This collection consists of site records from historic building recording work at the Spanish City Theatre, Whitley Bay, Tyneside. The works were conducted by Adept Building Consultancy Ltd between February and March 2024, prior to redevelopment and alteration to the site into a new leisure, retail, food/drink and entertainment offering. The change of use is the latest phase of redevelopment for the building, having originally been constructed as a theatre, converted to the Empress Ballroom shortly after and then being converted into a bingo hall. The record helps to capture and document the building prior to a further evolutionary stage of development and the conversion to retail/leisure and entertainment space.
DOI: 10.15468/dl.pw5r2s
title: Occurrence Download

description: A dataset containing 284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Africa",
 "Country is Ethiopia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Theropithecus gelada (Rüppell, 1835)"
 ]
}

 The dataset includes 284 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042542-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dksewj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Closterium abruptum West",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((30.5701 -24.0715,25.5395 -24.0715,25.5395 -28.5786,30.5701 -28.5786,30.5701 -24.0715))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042543-250525065834625/datasets/export for details.
DOI: 10.17632/ffhvr8prdn
title: Synergistic mitigation of greenhouse gas emissions in maize field by green manure’s substitution of nitrogen and sesbania biochar: regulation of soil C and N cycling substrates and microbes

description: Title: Synergistic mitigation of greenhouse gas emissions in maize field by green manure’s substitution of nitrogen and sesbania biochar: regulation of soil C and N cycling substrates and microbes
The data include greenhouse gas emissions, soil chemical properties, and data related to metagenomic sequencing.
DOI: 10.60756/lnec-tasy25h328
title: Shake-table testing of a full-scale timber roof substructure to collapse conditions (LNEC-BUILD-2)

description: The dataset contains acceleration and displacement measurements from shake-table and cyclic quasi-static tests conducted on a full-scale roof structure. The test structure comprised URM gables built with cavity walls, supporting a pitched timber roof. It underwent a series of incremental dynamic tests up to the out-of-plane collapse of the gable walls. Subsequently, the timber diaphragm was subjected to cyclic quasi-static tests up to significant damage to the timber-to-timber screw connections. These tests complemented earlier experiments on a full-scale two-storey building specimen simulating the end unit of a typical Dutch terraced house. Their objective was to explore the seismic vulnerability and collapse mechanism of fragile URM gable walls.

The shake-table tests were conducted in 2017 at the National Laboratory for Civil Engineering (LNEC) facilities in Lisbon, Portugal. They were part of the EUCENTRE Foundation project 'Study of the vulnerability of masonry buildings in Groningen', within the research framework programme on hazard and risk of induced seismicity in the Groningen province, sponsored by the Nederlandse Aardolie Maatschappij BV (NAM). The project was carried out in collaboration with the research group of Masonry Structures from the University of Pavia in Italy.
DOI: 10.17632/ffhvr8prdn.1
title: Synergistic mitigation of greenhouse gas emissions in maize field by green manure’s substitution of nitrogen and sesbania biochar: regulation of soil C and N cycling substrates and microbes

description: Title: Synergistic mitigation of greenhouse gas emissions in maize field by green manure’s substitution of nitrogen and sesbania biochar: regulation of soil C and N cycling substrates and microbes
The data include greenhouse gas emissions, soil chemical properties, and data related to metagenomic sequencing.