cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12355064.v1
title: clinical trials by country of sponsor collaborators

description: New clinical trials by country of sponsor collaborators. Each trial is apportioned and credited to the country of each sponsor (this weighting is referred to in the axis label). Europe is defined to include the EU-27 countries, Norway, Switzerland and the UK.
DOI: 10.6084/m9.figshare.12354818
title: Large (≥30 m) boulders on Bennu and their upslope/downslope elevation differences

description: <b>Bennu’s largest boulders. Indicates the location (lat, lon) of all boulders </b><b>30 m, and the measured difference in their upslope/downslope elevation. Description of methods and motivation for this analysis are included in the main text of the manuscript.</b>
DOI: 10.6084/m9.figshare.12355040.v2
title: catalog.calls.gz

description: Catalog calls built with Stacks software for Aedes aegypti samples from Argentina<br>
DOI: 10.6084/m9.figshare.12354812
title: Data sets and R Code: Evaluating boreal forest restoration strategies after moose (Alces alces) overbrowsing

description: This file contains the R code and data sets used in Noonan et al. Evaluating boreal forest restoration strategies after moose (<i>Alces alces</i>) overbrowsing. <br>
DOI: 10.6084/m9.figshare.12354818.v1
title: Large (≥30 m) boulders on Bennu and their upslope/downslope elevation differences

description: <b>Bennu’s largest boulders. Indicates the location (lat, lon) of all boulders </b><b>30 m, and the measured difference in their upslope/downslope elevation. Description of methods and motivation for this analysis are included in the main text of the manuscript.</b>
DOI: 10.6084/m9.figshare.12355040.v1
title: catalog.calls.gz

description: Catalog calls built with Stacks software for Aedes aegypti samples from Argentina<br>
DOI: 10.6084/m9.figshare.12355277.v4
title: GTIDM

description: This contains the codes and datasets for our manuscript submitted to IJGIS (IJGIS-2020-0294).An ArcGIS project including GTIDM button using ArcObject and VBA programming.A MATLAB function that simulates the game between. government and developers. <br>Land-use map and master plan in shape-file format.<br>
DOI: 10.6084/m9.figshare.12354773
title: Instances of mass movement morphologies on Bennu

description: <b>Table of mass movement morphologies on Bennu. Columns include location (lat, lon), morphologic type (boulder burial, rocks on rocks, particle organization, and mass flow), interpreted orientation of motion (0:N, 90:E, 180: S, 270: W), current slope, and slope delta in the modeled spin-up from a past spin rate of 5 hr to the current spin rate of 4.3 hr.</b>
DOI: 10.6084/m9.figshare.12355277.v5
title: GTIDM

description: This contains the codes and datasets for our manuscript submitted to IJGIS (IJGIS-2020-0294).An ArcGIS project including GTIDM button using ArcObject and VBA programming.A MATLAB function that simulates the game between. government and developers. <br>Land-use map and master plan in shape-file format.<br>
DOI: 10.6084/m9.figshare.12355277.v6
title: GTIDM

description: This contains the codes and datasets for our manuscript submitted to IJGIS (IJGIS-2020-0294).An ArcGIS project including GTIDM button using ArcObject and VBA programming.A MATLAB function that simulates the game between. government and developers. <br>Land-use map and master plan in shape-file format.<br>
DOI: 10.6084/m9.figshare.12354608
title: Survey requests

description: Survey request invitation and reminders for 2020 Idaho resident hunter pilot survey.
DOI: 10.6084/m9.figshare.12354650.v1
title: Collaborative task scheduling with new task arrival in cloud manufacturing using improved multi-population biogeography-based optimization

description: This is the experimental data of the manuscript entitled "Collaborative task scheduling with new task arrival in cloud manufacturing using improved multi-population biogeography-based optimization". All data are generated through computer simulation and saved in the file with txt format. The data are consistent with the real-world case. The “illustrative case data.txt” is used in Section 5.2 as illustrative examples corresponding to table 1 and table 2, respectively. SS01-LS10 are used in Section 5.3 and SR01-LR10 are used in Section 5.4.<br>
DOI: 10.6084/m9.figshare.12354608.v1
title: Survey requests

description: Survey request invitation and reminders for 2020 Idaho resident hunter pilot survey.
DOI: 10.6084/m9.figshare.12353303
title: Developmental Plasticity

description: Data set for Robertson and McClelland
DOI: 10.6084/m9.figshare.12353303.v1
title: Developmental Plasticity

description: Data set for Robertson and McClelland
DOI: 10.5522/04/12350597
title: Lithium-ion Battery INR18650 MJ1 3D X-ray CT Data: NMC811 Cathode vs Graphite-Silicon Anode Full-Cell (EIL-016)

description: <b>3D data on an 18650 Li-ion Battery Full-Cell with Nickel-Rich NMC811 Cathode and Graphite-Silicon Anode</b><br><br><br>Collected using Nikon XT H225 (Nikon Metrology, Inc. U.S.A.). <br>Accelerating tube voltage of 170 kVp.<br><br>Polychromatic beam with a characteristic emission peak of 58 keV (W-Kα).<br>One scan with 2278 X-ray radiograph projections, with a 1 second exposure time per projection. <br><br>The raw radiographs can be made available upon request.<br>The radiographs were then reconstructed using commercial software employing cone-beam filtered back-projection algorithms ((‘CT Pro 3D’,Nikon Metrology, Inc. U.S.A.),producing an isotropic voxel length of 36 um.<br>The reconstructed volume produced one tomogram of the entire cell assembly (EIL-016.tif).<br><br>
DOI: 10.6084/m9.figshare.12349988
title: Supplementary Table S1. List of organisms used in the the phylogenetic analysis. The new sequence is in bold.

description: GenBank accession numbers of Squamate reptiles. 21 May 2020.
DOI: 10.6084/m9.figshare.12350000
title: Genomic selection for grain yield in the CIMMYT wheat breeding program – status and perspectives

description: Genotyping data for 23,526 CIMMYT wheat breeding lines in the yield trials. The homozygous alleles are indicated by 0 and 1 and the heterozygote is indicated by 0.5 in the dataset.<br>
DOI: 10.6084/m9.figshare.12349928
title: supplementaryS1.pdf

description: List of GenBank accession numbers of complete squamate reptiles mitogenomes. 21 May 2020.
DOI: 10.6084/m9.figshare.12349928.v1
title: supplementaryS1.pdf

description: List of GenBank accession numbers of complete squamate reptiles mitogenomes. 21 May 2020.
DOI: 10.6084/m9.figshare.12349847
title: Example data for MitiSegmenter software

description: Example microCT dataset to accompany MitiSegmenter software, for the high throughput segmentation of samples microCT scanned in microtiter plates.<br>Example specimens comprise tail vertebrae from archaeological scombrid (tuna family) fish remains.<br>Dataset comprises an 8-bit tiff stack of two microtiter plates (3x2 wells, and 6x4 wells) arranged vertically. Scan has been downsampled to a voxel size of 0.0951mm.
DOI: 10.6084/m9.figshare.12349847.v1
title: Example data for MitiSegmenter software

description: Example microCT dataset to accompany MitiSegmenter software, for the high throughput segmentation of samples microCT scanned in microtiter plates.<br>Example specimens comprise tail vertebrae from archaeological scombrid (tuna family) fish remains.<br>Dataset comprises an 8-bit tiff stack of two microtiter plates (3x2 wells, and 6x4 wells) arranged vertically. Scan has been downsampled to a voxel size of 0.0951mm.
DOI: 10.6084/m9.figshare.12349751
title: Figure 7 underlying data. Original PCR genotyping gel electrophoresis images

description: Underlying data for Figure 7 showing original PCR genotyping gel electrophoresis images to check clones for AAVS1 targeting and integration of the CAG-RGECO-IRES-Puro cassette
DOI: 10.5281/zenodo.3999629
title: Multi-year impact of maternal provisioning on a juvenile elasmobranch: pitfalls of tissue type and tracer number for stable isotope analysis

description: Stable isotope data and R script for all the analysis referred to in the manuscript.
DOI: 10.6084/m9.figshare.12349751.v1
title: Figure 7 underlying data. Original PCR genotyping gel electrophoresis images

description: Underlying data for Figure 7 showing original PCR genotyping gel electrophoresis images to check clones for AAVS1 targeting and integration of the CAG-RGECO-IRES-Puro cassette
DOI: 10.17866/rd.salford.12349724
title: Interview Guide - DevOps

description: Interview guide. Semi-structured open-ended interview guide used for software engineering practitioner inteviews.<br>
DOI: 10.5281/zenodo.3999628
title: Multi-year impact of maternal provisioning on a juvenile elasmobranch: pitfalls of tissue type and tracer number for stable isotope analysis

description: Stable isotope data and R script for all the analysis referred to in the manuscript.
DOI: 10.6084/m9.figshare.12349715
title: Table 2.2 Guide 3 off-target locations

description: Guide RNA sequence and in silico predicted off-target locations as determined using an online tool (http://crispr.mit.edu). Pairs of bidirectional sgRNAs were used in conjunction with a mutant Cas9 D10A nickase to further reduce the chance of off-target events.
DOI: 10.17866/rd.salford.12349724.v1
title: Interview Guide - DevOps

description: Interview guide. Semi-structured open-ended interview guide used for software engineering practitioner inteviews.<br>
DOI: 10.6084/m9.figshare.12349688
title: Table 2.1 Guide 2 off-target locations

description: Guide RNA sequence and in silico predicted off-target locations as determined using an online tool (http://crispr.mit.edu). Pairs of bidirectional sgRNAs were used in conjunction with a mutant Cas9 D10A nickase to further reduce the chance of off-target events.
DOI: 10.6084/m9.figshare.12349715.v1
title: Table 2.2 Guide 3 off-target locations

description: Guide RNA sequence and in silico predicted off-target locations as determined using an online tool (http://crispr.mit.edu). Pairs of bidirectional sgRNAs were used in conjunction with a mutant Cas9 D10A nickase to further reduce the chance of off-target events.
DOI: 10.6084/m9.figshare.12349349
title: FileS1.pdf

description: <b>File S1:</b> Description and results of the preliminary attraction assay of <i>M. incognita </i>to the <i>Pseudomonas</i> isolate.
DOI: 10.6084/m9.figshare.12349349.v1
title: FileS1.pdf

description: <b>File S1:</b> Description and results of the preliminary attraction assay of <i>M. incognita </i>to the <i>Pseudomonas</i> isolate.
DOI: 10.6084/m9.figshare.12348920
title: Data for paper "Using the molecular rotational motion concept to predict the volume expansion coefficients of liquids"

description: 1) To calculate the average volume expansion coefficient reference data of liquid densities in the range of 20–50 °C were used, and the entropy was calculated for the middle of the specified interval (35 °C).<br><br>2) Calculations of the moments of inertia were made as follows. Initially, for a conformer (if a conformational isomerism was possible for the compound) with minimal energy, a nonempirical calculation of optimized atomic coordinates was performed using the GAMESS software package (ver. 2018-R1-pgi-mkl, the Hartree-Fock method, basis 6-31G*), which was then used to calculate moments of inertia in the program "Moments of inertia" written specially for this purpose. The correctness of the results obtained was verified (for those compounds for which it was possible) by comparison with the database of computational chemistry and comparative tests of the National Institute of Standards and Technology (NIST). <br>
DOI: 10.6084/m9.figshare.12348920.v1
title: Data for paper "Using the molecular rotational motion concept within the framework of the "structure-property" problem to predict the volume expansion coefficients of liquids"

description: 1) To calculate the average volume expansion coefficient reference data of liquid densities in the range of 20–50 °C were used, and the entropy was calculated for the middle of the specified interval (35 °C).<br><br>2) Calculations of the moments of inertia were made as follows. Initially, for a conformer (if a conformational isomerism was possible for the compound) with minimal energy, a nonempirical calculation of optimized atomic coordinates was performed using the GAMESS software package (ver. 2018-R1-pgi-mkl, the Hartree-Fock method, basis 6-31G*), which was then used to calculate moments of inertia in the program "Moments of inertia" written specially for this purpose. The correctness of the results obtained was verified (for those compounds for which it was possible) by comparison with the database of computational chemistry and comparative tests of the National Institute of Standards and Technology (NIST). <br>
DOI: 10.6084/m9.figshare.12348218
title: Comparison of article count and fractional count of publications of leading Russian organizations in 2018

description: This is an appednix to the article that introduces the concept of a national fractional count, which allows to assess more objectively the contribution of organizations and researchers to the gross scientific product and does not demotivate participation in international collaborations. We performed a detailed comparison of the article and national fractional counts in 2018, as well as in dynamics over the period 2000-2018 and in the fields of science for the three groups of organizations. Comparison shows the increasing variation of fractional and article counting results. <br>
DOI: 10.6084/m9.figshare.12347891
title: Study Questionnaire.docx-Factors associated with health facility delivery..docx

description: English and Kiswahili version questionnaires
DOI: 10.6084/m9.figshare.12347825
title: Cretaceous Oceanic Anoxic Event 2 in eastern England: further palynological and geochemical data from Melton Ross

description: Tables of supporting information (in Excel format).
DOI: 10.6084/m9.figshare.12347891.v1
title: Study Questionnaire.docx-Factors associated with health facility delivery..docx

description: English and Kiswahili version questionnaires
DOI: 10.6084/m9.figshare.12347258
title: Supplementary material: Triassic fossil-bearing sites in the Mid-Zambezi Basin, Zim

description: Supplementary Tables S1 - S3: georeferenced sites, fossil catalogues.<br>Supplementary file: Chete Formation brief, structural mapping around Lake Kariba.<br>
DOI: 10.6084/m9.figshare.12347825.v1
title: Cretaceous Oceanic Anoxic Event 2 in eastern England: further palynological and geochemical data from Melton Ross

description: Tables of supporting information (in Excel format).
DOI: 10.6084/m9.figshare.12347210
title: Continuous flow system for biofilm formation using controlled concentrations of <i>Pseudomonas putida</i> from chicken carcass and coupled to electrochemical impedance detection

description: Most studies dealing with monitoring the dynamics of biofilm formation use microbial suspensions at high concentrations. These conditions do not always represent food or water distribution systems. A continuous flow system capable of controlling the concentration of the microbial suspension stream from 10<sup>4</sup> to 10<sup>6</sup> CFU ml<sup>−1</sup> is reported. <i>Pseudomonas putida</i> biofilms formed using 100-fold, 1,000-fold or 10,000-fold diluted bacterial suspensions were monitored in-line by electrochemical impedance spectroscopy (EIS) and total plate counts. Randles equivalent circuit model and a modified Randles model with biofilm elements were used to fit the EIS data. In Randles equivalent circuit, the charge transfer resistance decreased as the biofilm formed. The log colony counts of the biofilm correlated to the charge transfer resistance. In the biofilm model, the biofilm resistance and the double layer capacitance decreased as the biofilm formed. The log colony counts of the biofilm correlated to the biofilm resistance.
DOI: 10.6084/m9.figshare.12347258.v1
title: Supplementary material: Triassic fossil-bearing sites in the Mid-Zambezi Basin, Zim

description: Supplementary Tables S1 - S3: georeferenced sites, fossil catalogues.<br>Supplementary file: Chete Formation brief, structural mapping around Lake Kariba.<br>
DOI: 10.17028/rd.lboro.12346457
title: 2 to 10 Node Nonisomorphic Adjacency Matrices

description: Adjacency matrices for all nonisomorphic graphs on 2 to 10 nodes in the order produced by Maple 2017.3's nonisomorphic graph generator.<br>A separate file exists for graphs of each order, i.e. those with a given number of nodes.Matrices for nonisomorphic graphs are immediately included on subsequent rows such that the i<sup>th</sup><sub> </sub>matrix is found on and between the rows: i*N and (i+1)N-1.<br>
DOI: 10.6084/m9.figshare.12347210.v1
title: Continuous flow system for biofilm formation using controlled concentrations of <i>Pseudomonas putida</i> from chicken carcass and coupled to electrochemical impedance detection

description: Most studies dealing with monitoring the dynamics of biofilm formation use microbial suspensions at high concentrations. These conditions do not always represent food or water distribution systems. A continuous flow system capable of controlling the concentration of the microbial suspension stream from 10<sup>4</sup> to 10<sup>6</sup> CFU ml<sup>−1</sup> is reported. <i>Pseudomonas putida</i> biofilms formed using 100-fold, 1,000-fold or 10,000-fold diluted bacterial suspensions were monitored in-line by electrochemical impedance spectroscopy (EIS) and total plate counts. Randles equivalent circuit model and a modified Randles model with biofilm elements were used to fit the EIS data. In Randles equivalent circuit, the charge transfer resistance decreased as the biofilm formed. The log colony counts of the biofilm correlated to the charge transfer resistance. In the biofilm model, the biofilm resistance and the double layer capacitance decreased as the biofilm formed. The log colony counts of the biofilm correlated to the biofilm resistance.
DOI: 10.17028/rd.lboro.12346457.v1
title: 2 to 10 Node Nonisomorphic Adjacency Matrices

description: Adjacency matrices for all nonisomorphic graphs on 2 to 10 nodes in the order produced by Maple 2017.3's nonisomorphic graph generator.<br>A separate file exists for graphs of each order, i.e. those with a given number of nodes.Matrices for nonisomorphic graphs are immediately included on subsequent rows such that the i<sup>th</sup><sub> </sub>matrix is found on and between the rows: i*N and (i+1)N-1.<br>
DOI: 10.6084/m9.figshare.12345986
title: redmeat_maasai_tanzania.dta

description: This was community based cross sectional study conducted among Maasai pastoralists within Ngorongoro Conservation Area, Arusha - Tanzania. This was a self reporting interview using WHO Non-Communicable Diseases Stepwise approach surveillance (STEPS) with additional questions to account for cultural diet of Maasai in Tanzania. The questionnaire included; social demographic information (age gender, income etc), data on life style (physical activity, tobacco use, alcohol consumption, dietary intake) and relevant family history information was collected from each participant through self-reporting. The quantity of red meat consumed, anthropometric, and BP were measured. Samples of blood glucose and the total cholesterol levels were collected and tested. The amount of red meat consumed was estimated using adult meat portion measurement charts (adopted from Tanzania food composition table - available online) after self-reporting.
DOI: 10.6084/m9.figshare.12345986.v1
title: redmeat_maasai_tanzania.dta

description: This was community based cross sectional study conducted among Maasai pastoralists within Ngorongoro Conservation Area, Arusha - Tanzania. This was a self reporting interview using WHO Non-Communicable Diseases Stepwise approach surveillance (STEPS) with additional questions to account for cultural diet of Maasai in Tanzania. The questionnaire included; social demographic information (age gender, income etc), data on life style (physical activity, tobacco use, alcohol consumption, dietary intake) and relevant family history information was collected from each participant through self-reporting. The quantity of red meat consumed, anthropometric, and BP were measured. Samples of blood glucose and the total cholesterol levels were collected and tested. The amount of red meat consumed was estimated using adult meat portion measurement charts (adopted from Tanzania food composition table - available online) after self-reporting.
DOI: 10.6084/m9.figshare.12345743.v1
title: New insights into the phylogeny and evolution of lady beetles (Coleoptera: Coccinellidae) by extensive sampling of genes and species

description: Ladybirds (family Coccinellidae) are one of the most diverse groups of beetles and globally comprise over 6000 species. Despite their scientific and economic significance, the taxonomy of Coccinellidae remains unstable, and we still know little about their evolutionary history. By using a small number of genes, previous phylogenetic analyses have not reliably resolved the relationships among major ladybird lineages. In this study, we sequenced 94 nuclear protein-coding genes for 214 species of Coccinellidae and 14 outgroups, covering 90 genera and 35 tribes. We found that the nucleotide compositional heterogeneity is present between ladybird tribes so that phylogenetic inference at the amino acid level is more reliable. Based on the maximum likelihood analyses of the amino acid dataset, we recognized three subfamilies in Coccinellidae: Microweisinae, Monocoryninae, and Coccinellinae. The subfamily relationships are strongly supported as (Microweisinae, (Monocoryninae, Coccinellinae)). The tribes of ladybirds are mostly monophyletic, except Ortaliini, Sticholotidini, Scymnini, and Coccidulini. The phylogenetic relationships among tribes of Coccinellinae were still not resolved yet, with many nodes weakly supported. Our divergence time analysis suggests that the crown group of extant lady beetles occurred in the Early Cretaceous ~143 million years ago (Mya) and experienced a rapid diversification process during the Late Cretaceous (120 - 70 Mya). We hypothesize that that the boom of angiosperms in the Late Cretaceous may promote the diversification of herbivorous Sternorrhyncha insects, especially aphids, which in turn drove the rapid radiation of predatory lady beetles. In summary, our work provides a comprehensive time-calibrated phylogeny of Coccinellidae that provides a sound framework for revising their classification and understanding the origin of their biodiversity.The data including the concatenated supermatrix of DNA, degenerate DNA and protein dataset and the related tree files in the manuscript.<br><br>
DOI: 10.6084/m9.figshare.12344999
title: Additional file 2 of Mass spectrometric analysis of the in vitro secretome from equine bone marrow-derived mesenchymal stromal cells to assess the effect of chondrogenic differentiation on response to interleukin-1β treatment

description: Additional file 2: Supplementary 3. Table with data used for the heatmap.
DOI: 10.6084/m9.figshare.12344999.v1
title: Additional file 2 of Mass spectrometric analysis of the in vitro secretome from equine bone marrow-derived mesenchymal stromal cells to assess the effect of chondrogenic differentiation on response to interleukin-1β treatment

description: Additional file 2: Supplementary 3. Table with data used for the heatmap.
DOI: 10.6084/m9.figshare.12344993
title: Additional file 1 of Mass spectrometric analysis of the in vitro secretome from equine bone marrow-derived mesenchymal stromal cells to assess the effect of chondrogenic differentiation on response to interleukin-1β treatment

description: Additional file 1: Supplementary 1 and 2. Scatter plot with log2-transformed label free quantification (LFQ) values from mass spectrometry analysis of the secretomes harvested after 1) 48 h (48) and 2) 10 days (10) from equine bone marrow-derived mesenchymal stromal cells subjected to IL-1β stimulation (IL) for five days followed by five days without inflammation. At both time points, the secretome from naïve cells (EM) and chondrogenic differentiating cells (CM) was assessed.