cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/f7pg1qwc
title: Data in support of 5-year sediment budget and morphodynamic analysis of Elwha River following dam removals

description: Two large dams were removed from the Elwha River in Washington, starting in 2011 and ending in 2014. The Elwha and the Glines Canyon dams were located approximately 7 km and 20 km upstream, respectively, from the Elwha River's mouth on the Strait of Juan de Fuca. The dams trapped over 20 million cubic meters of sediment. Dam removal changed the river's sediment budget and water flow, which affected the river's morphology. This data release presents digital elevation models (DEMs), orthomosaic images, dam height measurements, sediment measurements and river streamgage data that were collected by the U.S. Geological Survey (USGS) and U.S. Bureau of Reclamation (USBR) to support studies on morphodynamic and sediment budget responses of the Elwha River to the removal of the dams. The DEMs were created using a synthesis of lidar and structure-from-motion (SfM) photogrammetry to study elevation changes in the river channel. Photographs from the SfM photogrammetry surveys were also used to create orthomosaic images of the middle and lower reaches of the Elwha River. These mosaics stitched together thousands of images to create a single orthorectified image which allowed scientists to study how the river's path changed in response to differing sediment and water volume conditions after the removal of the dams. Because of the large scale of the dam removals, their deconstruction took multiple years. This gradual removal is reflected in the dam heights data, where dams' heights above the river bed were measured numerous times during the study. Streamgage measurements recorded changes in the river's surface water level and were collected with a water logger deployed downstream of the Elwha Dam's location. The river's sedimentology was measured in terms of the suspended sediment in the river, the bedload (or sediment transported along the riverbed), and the upstream sediment contribution. Table 1. List of authors, their agency, and the data they collected. Author Agency Data Andrew C. Ritchie USGS1 Orthomosaics, DEMs, streamgage Christopher A. Curran USGS Upstream sediment, suspended sediment, bedload, daily sediment Christopher S. Magirl USGS Upstream sediment, suspended sediment, bedload, daily sediment Jennifer A. Bountry USBR2 Upstream sediment, dam elevations, streamgage Robert C. Hilldale USBR Bedload, daily sediment Timothy J. Randle USBR Upstream sediment, dam elevations, streamgage Jefferey J. Duda USGS Suspended sediment 1. U.S. Geological Survey 2. U.S. Bureau of Reclamation For more information on the USGS's science in support of the Elwha River Restoration Project, please visit https://walrus.wr.usgs.gov/elwha/
DOI: 10.5258/soton/wp00671
title: Global 1km Population total adjusted to match the corresponding UNPD estimate

description: RF-based gridded population distribution datasets produced in the framework of the Global Project adjusted to match UNPD totals (from the 2019 Revision of World Population Prospects)
DOI: 10.5281/zenodo.11039444
title: Spatial Mapping of Mobile Genetic Elements and their Cognate Hosts in Complex Microbiomes - Identifying the host taxon of a previously undescribed plasmid

description: We investigated the taxonomic association of an unknown plasmid within a plaque biofilm of a patient diagnosed with stage 3 periodontitis. We combined long- and short- read sequencing to identify a complete plasmid with minimal homology to any sequence in the RefSeq database. The plasmid carried several predicted genes for mobilization and toxin-antitoxin systems. We designed MGE-FISH probes for the plasmid and combined this MGE-FISH stain with an 18-genera HiPR-FISH panel.

Images are labeled by collection time such that the laser order for a given field of view (fov) is: 488nm Lambda, 514nm Lambda, 561nm Lambda, 633nm Airyscan, 405nm Lambda. We used Flye (https://github.com/fenderglass/Flye) to assemble the plasmid using long read Nanopore sequencing only and we used OPERA-MS (https://github.com/CSB5/OPERA-MS) to do hybrid assembly with Illumina short reads and Nanopore long reads. The assemblies are in the fasta files and the reads that map to the assemblies are in the fastq files.
DOI: 10.5281/zenodo.11613330
title: Daily, monthly and annual data from A decade (2008-2017) of water stable-isotope composition of precipitation at Concordia Station, East Antarctica

description: A ten-year record of oxygen and hydrogen isotopic composition of precipitation is here presented: from 2008 to 2017, 1483 daily precipitation samples were collected all-year round on a raised platform at Concordia Station, East Antarctica.

The dataset is discussed in the following pubblication:

Dreossi, G., Masiol, M., Stenni, B., Zannoni, D., Scarchilli, C., Ciardini, V., Casado, M., Landais, A., Werner, M., Cauquoin, A., Casasanta, G., Del Guasta, M., Posocco, V., and Barbante, C.: A decade (2008–2017) of water stable-isotope composition of precipitation at Concordia Station, East Antarctica, EGUsphere [preprint], https://doi.org/10.5194/egusphere-2023-2813, 2023.

The dataset includes 3 main datasheets:

1. DAILY data with date, daily dataset for isotopes (δ18O, δ2H, d-excess), starting and ending date and hour, temperature and RH from the AWS (aws.temp and aws.RH, respectively) and the ERA5 temperature and total precipitation (era5.t2m and era5.tp, respectively);

2. MONTHLY data with months, monthly averages for isotopes (δ18O, δ2H, d-excess), monthly averages for isotopes weighted for AWS temperature (δ18O.aws.temp, δ2H.aws.temp, d-excess.aws.temp), monthly averages for isotopes weighted for ERA5 total precipitation (δ18O.era5.tp, δ2H.era5.tp, d-excess.era5.tp), monthly averages for air temperature and RH from the AWS (aws.temp and aws.RH, respectively) and the ERA5 temperature and total precipitation (era5.t2m and era5.tp, respectively);

3. ANNUAL data with years, annual averages for isotopes (δ18O, δ2H, d-excess), annual averages for isotopes weighted for AWS temperature (δ18O.aws.temp, δ2H.aws.temp, d-excess.aws.temp), annual averages for isotopes weighted for ERA5 total precipitation (δ18O.era5.tp, δ2H.era5.tp, d-excess.era5.tp), annual averages for air temperature and RH from the AWS (aws.temp and aws.RH, respectively) and the ERA5 temperature and total precipitation (era5.t2m and era5.tp, respectively).
DOI: 10.5281/zenodo.13292098
title: Single-stage synchronous India-Asia collision model revealed by Himalayan high-pressure metamorphic rocks
DOI: 10.5281/zenodo.8015833
title: Spatial Mapping and Host Linking of Mobile Genetic Elements in Complex Microbiomes - Mapping MGEs in oral plaque biofilms at high specificity

description: We stained for the GFP gene in samples that contained mixtures of plaque and GFP-transformed E. coli. We mapped mefE, an AMR gene located on a plasmid and encoding an antibiotic efflux pump, in the plaque metagenomic data of volunteer A but not volunteer B. To test the efficacy of gel embedding and clearing, we used orthogonal FISH probes, designed to not target any sequence in the plaque. We identified a T7-like prophage via metagenomic analysis and developed probes targeting its capsB gene, which encodes the minor capsid protein. We identified a highly prevalent prophage of the class Caudoviricetes with a large terminase gene, termL, and were able to design a large set of FISH probes to stain in three different colors simultaneously. We identified three non-plasmid AMR genes within metagenome assembled genomes: patA, patB, and adeF.
DOI: 10.5281/zenodo.8260204
title: Master Data for Histopathology

description: Master data for the article of Comparison between premortem histopathology findings in rats with and without traumatic brain injury: Prospective application in forensic medicine.
DOI: 10.57932/1e9ff61f-1f06-48ae-92d9-6e1f7df8ad8c
title: Timeseries of the snow surface temperature acquired at the Col du Lautaret (French Alps) during spring 2023 with an uncooled thermal infrared camera - v2 - UTC
title: Timeseries of the snow surface temperature acquired at the Col du Lautaret (French Alps) during spring 2023 with an uncooled thermal infrared camera - v2 - UTC

description: This dataset contains maps of the surface temperature of snow acquired at the Col du Lautaret (French Alps) every 2 minutes during spring 2023 with an uncooled thermal infrared camera (TIR), timeseries of RGB images of the scene acquired every 10 minutes during operation of the TIR camera, timeseries of the surface temperature, incoming longwave radiation, air temperature, air humidity and wind speed acquired every 30 seconds at two distinct points in the camera’s field of view, and the TIR camera’s internal temperature. It also includes map of the distance and observation angle between the camera and pixels. All times are in Coordinated Universal Time (UTC).
description: This dataset contains maps of the surface temperature of snow acquired at the Col du Lautaret (French Alps) every 2 minutes during spring 2023 with an uncooled thermal infrared camera (TIR), timeseries of RGB images of the scene acquired every 10 minutes during operation of the TIR camera, timeseries of the surface temperature, incoming longwave radiation, air temperature, air humidity and wind speed acquired every 30 seconds at two distinct points in the camera’s field of view, and the TIR camera’s internal temperature. It also includes map of the distance and observation angle between the camera and pixels. All times are in Coordinated Universal Time (UTC).
DOI: 10.6084/m9.figshare.20134994
title: Database

description: Database
DOI: 10.6084/m9.figshare.25593078
title: Genome annotation of <i>Gyromitra esculenta</i> and <i>Paragyromitra xinjiangensis</i>

description: Genome annotation of <i>Gyromitra esculenta</i> and <i>Paragyromitra xinjiangensis</i>
DOI: 10.6084/m9.figshare.26503279
title: Supplementary Material for: Clinical and Immunological Features of Bronchial Asthma Comorbid Chronic Urticaria: A Retrospective Study

description: Introduction: Asthma and chronic urticaria (CU) are two high prevalent diseases and often coexist. The underlying relationship and potential immunological mechanism between the two diseases are still unclear. To investigate the clinical and immunological feature of asthma comorbid with CU. 
Methods: A retrospective study was conducted. 50 patients with asthma comorbid CU,50 patients of with asthma, 50 patients of with CU alone. Age and sex of the patients enrolled were matched. Data of demographic characteristics, clinical manifestations including disease severity (frequency of symptoms, age of onset, disease duration, symptom score, complication with allergic rhinitis) as well as serum immunological index including total IgE(tIgE), allergen specific IgE (sIgE) and food specific IgG4 (FS-IgG4), were collected and analyzed. 
Results: No significant differences in the frequency of symptoms, age of onset and disease duration were found among the three groups. The score of asthma control test (ACT) in patients with asthma comorbid CU was significantly lower than that of asthma (p=0.005), however, compared with patients with CU, the 7-day urticaria activity score(UAS7) of patients with asthma comorbid CU didn’t show obvious differences. Immunological index showed that the positive rate of tIgE, house dust mite (HDM)-sIgE, and FS-IgG4 were different among the three groups (p&lt;0.05). Patients with asthma comorbid CU had the highest rate of positive tIgE, moderate and severe positive sIgE to HDM. Egg specific IgG4 (egg-sIgG4) had the highest positive rate in all groups.Patients of asthma comorbid CU obtained the highest rate of severe positive of egg-sIgG4.
Conclusion: Our results demonstrated that patients with asthma comorbid CU has lower control level of asthma symptoms, higher tIgE and HDM-sIgE level, and highest rate of severe positive egg-sIgG4. These results indicate that comorbidity of CU in asthma obviously increases the severity of allergens.
DOI: 10.1594/pangaea.920246
title: OCEANET-ATMOSPHERE low level stratus clouds during PS106

description: The dataset contains daily nc-files of the observed low level stratus clouds during Polarstern cruise PS106. These clouds were present below the lowest cloud radar range gate (155 m above the instrument) and hence not represented in the related Cloudnet data set.The low level stratus cloud were detected using the SNR of the OCEANET multiwavelength Raman and polarization lidar PollyXT (Engelmann et al., 2016 doi:10.5194/amt-9-1767-2016 ; Baars et al., 2017 doi:10.5194/amt-10-3175-2017 ).
DOI: 10.5281/zenodo.10143511
title: Testing paleomagnetic dating accuracy on pre-historic flank eruptions from SE slope of Etna volcano

description: Paleomagnetic and petrographic data used for supporting the work of Magli et al. (Testing paleomagnetic dating accuracy on pre-historic flank eruptions from SE slope of Etna volcano):

"AF_Demag.xlsx" = Alternating Field (AF) demagnetization data obtained at the Laboratory of Paleomagnetism (INGV of Rome) for each demagnetization step (20 up to 120 mT) for all samples.
"Bulk_susceptibility_&_Q.xlsx" = NRM (Natural Remanent Magnetization), k (susceptibility), J (induced magnetization intensity) and Q (Königsberger ratio, NRM/J) values obtained for each sample.
"ImageJ_analyses.xlsx" = abundance values (volume %) of vesicles and mineralogical phases obtained by ImageJ software (along with phenocrysts dimensions) for each random photo, for each sampling site and for each lava flow studied.
"Therm_curve.xlsx" = Susceptibility and temperature values obtained thorugh the MFK1 Kappabridge to provide thermomagnetic curves.
DOI: 10.5281/zenodo.13358034
title: Upper Minjiang River chronological data
DOI: 10.57932/8ed8f0b2-e6ae-4d64-97e5-1ae23e8b97b1
title: Timeseries of the snow surface temperature acquired at the Col du Lautaret (French Alps) during winter 2021-2022 with an uncooled thermal infrared camera - v2 - UTC

description: This dataset contains maps of the surface temperature of snow acquired at the Col du Lautaret (French Alps) every 2 minutes during winter 2021-2022 with an uncooled thermal infrared camera (TIR), timeseries of RGB images of the scene acquired every 10 minutes during operation of the TIR camera, timeseries of the surface temperature acquired every 30 seconds at two distinct points in the camera’s field of view, and the TIR camera’s internal temperature. It also includes map of the distance and observation angle between the camera and pixels. All times are in Coordinated Universal Time (UTC).
DOI: 10.6084/m9.figshare.25699101
title: Supplementary Material for: Evaluating ChatGPT's Accuracy in Responding to Patient Education Questions on Acute Kidney Injury and Continuous Renal Replacement Therapy

description: Introduction: Acute Kidney Injury (AKI) and Continuous Renal Replacement Therapy (CRRT) are critical areas in nephrology. The effectiveness of ChatGPT in simpler, patient education-oriented questions has not been thoroughly assessed. This study evaluates the proficiency of ChatGPT 4.0 in responding to such questions, subjected to various linguistic alterations. Methods: Eighty-nine questions were sourced from the Mayo Clinic Handbook for educating patients on AKI and CRRT. These questions were categorized as original, paraphrased with different interrogative adverbs, paraphrased resulting in incomplete sentences, and paraphrased containing misspelled words. Two nephrologists verified the questions for medical accuracy. A chi-squared test was conducted to ascertain notable discrepancies in ChatGPT 4.0's performance across these formats. Results: ChatGPT provided notable accuracy in handling a variety of question formats for patient education in AKI and CRRT. Across all question types, ChatGPT demonstrated an accuracy of 97% for both original and adverb-altered questions and 98% for questions with incomplete sentences or misspellings. Specifically for AKI-related questions, the accuracy was consistently maintained at 97% for all versions. In the subset of CRRT-related questions, the tool achieved a 96% accuracy for original and adverb-altered questions, and this increased to 98% for questions with incomplete sentences or misspellings. The statistical analysis revealed no significant difference in performance across these varied question types (p-value: 1.00 for AKI and 1.00 for CRRT), and there was no notable disparity between the AI's responses to AKI and CRRT questions (p-value: 0.71). Conclusion: ChatGPT 4.0 demonstrates consistent and high accuracy in interpreting and responding to queries related to AKI and CRRT, irrespective of linguistic modifications. These findings suggest that ChatGPT 4.0 has the potential to be a reliable support tool in the delivery of patient education, by accurately providing information across a range of question formats. Further research is needed to explore the direct impact of AI-generated responses on patient understanding and education outcomes.
DOI: 10.6084/m9.figshare.26302126
title: Supplementary Material for: The Impact of Statistical Thinking on Operational Performance and Managerial Decision-Making in Private Dental Service Organizations in The Southern Region of Saudi Arabia: An Empirical Investigation

description: Introduction: The literature has extensively addressed statistical thinking (STk) as a set of principles and concepts implemented within organizations to adopt a statistical perspective. This approach is frequently linked to the application of continuous improvement programs (CIP), such as Six Sigma and Lean Six Sigma. This study examines whether implementing STk principles positively correlates with operational performance within private dental services organizations operating in the CIP framework. Methods: This empirical study investigated a sample of 34 organizations from the private sector. Structural equation modeling, specifically partial least squares, was used for data analysis. Results: Statistical significance for the outer model loadings was demonstrated. Mediating variables positively affect the constructs’ explanatory power, even when statistical techniques (STes) do not show direct associations. The model exhibited a significant degree of explanatory power. Further, it effectively captured the association among STes, operational performance (OP), and decision-making (DM). In the multigroup analysis, only STes did not exhibit a statistically significant difference compared with the other components. Conclusion: The results provide evidence that CIPs are beneficial for applying STk principles and have a favorable effect on both OP and DM. This highlights the significance of CIPs, such as Six Sigma, Lean Six Sigma, and Total Quality Management, in a managerial context. This highlights the need to establish mechanisms that facilitate the dissemination and application of STk principles and STes to improve OP and DM in the dental services sector.
DOI: 10.6084/m9.figshare.26893276
title: Supplementary Material for: The association between preserved-ratio impaired spirometry and depression: results from a prospective population-based study

description: Introduction: The relationship between preserved-ratio impaired spirometry (PRISm) and depression remains unclear. This study aimed to assess the bidirectional relationship between PRISm and depression using data from a national cohort.
Methods: Data from Wave 2 (2004–2005) to Wave 4 (2008–2009) of the English Longitudinal Study of Ageing (ELSA) were analyzed. Lung function and depressive symptoms were measured at baseline and follow-up. Cox proportional hazard models were used to calculate the hazard ratio (HR) of PRISm with depression (Study 1) and depression with PRISm (Study 2).
Results: Studies 1 and 2 included 2,934 and 2,277 participants, respectively. The follow-up period extended from Wave 2 to Wave 4. In univariate analyses, a bidirectional association between PRISm and depression was observed, with unadjusted HRs of 1.49 (95% confidence interval [CI], 1.12-1.99; P=0.007) in Study 1 and 1.69 (95% CI, 1.13-2.52; P=0.010) in Study 2. However, in multivariable Cox models, baseline PRISm was not associated with subsequent depression development (adjusted HR 1.26; 95% CI, 0.94-1.69; P=0.128). Conversely, participants with depression had a significantly higher risk of developing PRISm compared to those without depression (adjusted HR 1.54; 95% CI, 1.03-2.32; P=0.038). These findings were consistent with z-score-based interpretive strategies, with an adjusted HR of 1.30 (95% CI, 0.95-1.77; P=0.105) in Study 1 and 1.59 (95% CI, 1.03-2.47; P=0.038) in Study 2.
Conclusions: Depression was associated with an increased risk of developing PRISm, whereas PRISm did not increase the risk of developing depression. Physicians should be vigilant for potential PRISm development in patients with depression.
DOI: 10.15468/dl.4zstjy
title: Occurrence Download

description: A dataset containing 2594 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is one of (Euoniticellus fulvus (Goeze, 1777))",
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence)",
 "Year is greater than or equal to 1901",
 "Year is less than or equal to 2019",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2594 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019281-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1285/i22402772a11p273
title: Aristone e i porti di Traiano: ipotesi per una rilettura di D. 1.8.10 (Pomp. 6 ex Plaut.)

description: The essay examines D. 1.8.10 (Pomp. 6 ex Plaut.) in the light of jurisprudential, literary and archaeological sources, to show how Aristo, in dealing with the phenomenon by which land areas occupied by the sea became public property, could have had in mind the artificial ports of Portus and Centumcellae built by Trajan.
description: El ensayo examina el D. 1.8.10 (Pomp. 6 ex Plaut.) a la luz de fuentes jurisprudenciales, literarias y arqueológicas, para mostrar cómo Aristón, al abordar el fenómeno por el cual las áreas terrestres ocupadas por el mar se convirtieron en bienes públicos, podría haber tenido en cuenta los puertos artificiales de Portus y Centumcellae construidos por Trajano.