cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.4q9gvh
title: Occurrence Download

description: A dataset containing 2215 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Gliricidia sepium (Jacq.) Kunth"
 ]
}

 The dataset includes 2215 records from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024126-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28395422
title: Instances of "New formulations and a matheuristic for the multi-product multi-period inventory lot sizing with supplier selection problem"

description: This research considers the multi-product, multi-period inventory lot-sizing with supplier selection problem, which is a well known complex combinatorial optimization problem proven to be NP-hard. We address the problem from a modeling viewpoint, thus we propose three new mixed integer programming formulations. The first formulation takes advantage of a disaggregated set of constraints, the second one improves a facility location problem (FLP) formulation which is known to have good linear relaxation, but scales poorly and finally a variant of the FLP formulation that, through an auxiliary variable, reduces the size of the decisions variables in the model. Furthermore, we prove that the decision variable related to the production quantity from a supplier in any period always has integer values. Although we present exact mathematical formulations, we take advantage of the properties of the problem and propose a two-phase matheuristic for this problem. The performance of the proposed exact and approximated methodologies is evaluated by comparing them against the traditional formulation and the original FLP formulation using the literature benchmark instances. The new formulations and the matheuristic outperform the previous proposed formulations from the literature in solution quality, computational time, and in some cases scalability.The original instances from Basnet & Leung (2005) are those that do not have the N1 and N2 labels, which correspond to the instances proposed in Cardenas-Barrón et al. (2021).
DOI: 10.5281/zenodo.14007821
title: Raw/L0 Multispectral Ship Classification Datasets

description: VDS2Raw - Classification

The VDS2Raw dataset comprises 64x64 pixel crops of raw granules derived from Sentinel-2 products, focusing specifically on vessels in Danish coastal areas. Each crop is centered on a ship and extracted from the original Sentinel-2 images to support vessel classification tasks. This dataset leverages Sentinel-2’s multispectral data, covering bands B2, B3, B4 and B8 with a spatial resolution of 10 meters, enabling coarse-grained vessel classification across three categories: Cargo, Sailing & Pleasure (S&P), and Fishing.

The dataset is structured with a total of 106 Cargo, 99 S&P, and 123 Fishing vessels, split into training (64 per class) and test subsets (42 Cargo, 35 S&P, and 59 Fishing vessels). 

VDVRaw - Classification

The VDVRaw dataset includes 64x64 pixel crops from VENμS satellite imagery, each centered on a maritime vessel, with high-resolution (5.3 meters at Nadir) imagery across 12 spectral bands. Each crop is taken from coregistered images, aligned to band B5 to ensure consistent spatial alignment, providing a robust foundation for classification tasks with detailed spectral data. The dataset targets two classes derived from AIS data: Bulk Carrier and Container Ship.

For the VENµS dataset, Bulk Carrier and Container Ship classes are represented with 643 and 398 samples, respectively. The dataset is structured into training (318 per class), and test (325 Bulk Carrier and 80 Container Ship vessels).
DOI: 10.15156/bio/sh0193235.10fu
title: SH0193235.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0193236.10fu
title: SH0193236.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0193237.10fu
title: SH0193237.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0193238.10fu
title: SH0193238.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.3n9c6q
title: Occurrence Download

description: A dataset containing 1378 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sargassum cymosum C.Agardh"
 ]
}

 The dataset includes 1378 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034901-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s3d1pf
title: Occurrence Download

description: A dataset containing 17336 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is UAM Invertebrate Collection (Arctos)"
 ]
}

 The dataset includes 17336 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003553-171025204727650/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uguhyr
title: Occurrence Download

description: A dataset containing 28166 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Didelphis marsupialis Linnaeus, 1758"
 ]
}

 The dataset includes 28166 records from 444 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037031-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.srndxx
title: Occurrence Download

description: A dataset containing 419 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 {
 "or" : [
 "TaxonKey is Rhynchotechum discolor (Maxim.) B.L.Burtt",
 "TaxonKey is Rhynchotechum alternifolium C.B.Clarke"
 ]
 },
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 419 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003553-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gbhjxp
title: Occurrence Download

description: A dataset containing 5218 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Siderastrea siderea (Ellis & Solander, 1786)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5218 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003554-150410134957023/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nuqdmy
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hoplitis bunocephala Michener, 1947"
 ]
}

 The dataset includes 25 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034909-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kzxjg4
title: Occurrence Download

description: A dataset listing the 113925 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is North America",
 "CoordinateUncertaintyInMeters 0.0-500.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 113925 records were derived from 760 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034872-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cbmnj9
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crataegus scabrida var. egglestonei (Sargent) Kruschke"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003554-150528172251762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.amb4qc
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Osmia calcarata White, 1952"
 ]
}

 The dataset includes 20 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034898-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9fppxb
title: Occurrence Download

description: A dataset containing 2077 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bassariscus astutus (Lichtenstein, 1830)"
 ]
}

 The dataset includes 2077 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003554-150811131857512/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xkcj2e
title: Occurrence Download

description: A dataset containing 3239 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Material sample, Material citation, Specimen, Living Specimen, Occurrence evidence)",
 "CoordinateUncertaintyInMeters 0.0-25700.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Derbidae"
 ]
}

 The dataset includes 3239 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048449-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f3phv5
title: Occurrence Download

description: A dataset containing 8215 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Occurrence evidence)",
 "Country is one of (China, Hong Kong, Macao)",
 "TaxonKey is Tringa stagnatilis (Bechstein, 1803)"
 ]
}

 The dataset includes 8215 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009385-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q71csy
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leptoptilos javanicus (Horsfield, 1821)",
 "Country is Nepal",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 85 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003554-150831095807960/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.thjmid
title: Occurrence Download

description: A dataset containing 468 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tapirus bairdii (Gill, 1865)"
 ]
}

 The dataset includes 468 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003554-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sqd8g7
title: Occurrence Download

description: A dataset containing 784 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "Geometry POLYGON((119.10288 -6.09701,125.5354 -6.09701,125.5354 1.81729,119.10288 1.81729,118.49698 -1.71479,118.53308 -3.16711,119.10288 -6.09701))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bryophyta"
 ]
}

 The dataset includes 784 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049267-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11105339
title: Candidate strongly-lensed Type Ia supernovae in the Zwicky Transient Facility archive

description: Data sets used for Figures in the article "Candidate strongly-lensed Type Ia supernovae in the Zwicky Transient Facility archive" Townsend et al.
DOI: 10.5281/zenodo.11105340
title: Candidate strongly-lensed Type Ia supernovae in the Zwicky Transient Facility archive

description: Data sets used for Figures in the article "Candidate strongly-lensed Type Ia supernovae in the Zwicky Transient Facility archive" Townsend et al.
DOI: 10.15468/dl.0czpwq
title: Occurrence Download

description: A dataset containing 3176 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ephedra fragilis Desf.",
 "Country is Spain"
 ]
}

 The dataset includes 3176 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003554-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cse5uz
title: Occurrence Download

description: A dataset containing 135 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psilopeganum sinense Hemsl."
 ]
}

 The dataset includes 135 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012611-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.163cb6
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Copiapoa dealbata F.Ritter"
 ]
}

 The dataset includes 25 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003554-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cjzcyi
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Chinese Taipei",
 "Country is China"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Mergus squamatus Gould, 1864",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 42 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003554-170627171947987/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u5xqzw
title: Occurrence Download

description: A dataset containing 10570 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((0.1707 40.7937,0.34729 40.7937,0.34729 40.96482,0.1707 40.96482,0.1707 40.7937))",
 "Year 2000-2023"
 ]
}

 The dataset includes 10570 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049257-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.twqyp6
title: Occurrence Download

description: A dataset containing 10758975 species occurrences available in GBIF matching the query:
{
 "or" : [
 "InstitutionCode is USNM",
 "InstitutionCode is US"
 ]
}

 The dataset includes 10758975 records from 1010 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004871-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a2fggh
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anisotoma frontalis (Portevin, 1927)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0216998-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p8xxxs
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Solidago canadensis L.",
 "Year 1970-2023"
 ]
}

 The dataset includes 88 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003486-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yvyrvs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nobuosciades clinostigmai Hasegawa, Takeda & Karube, 2011",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0225351-220831081235567/datasets/export for details.
DOI: 10.15468/dl.egu5xv
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leontonyx pusillus Less."
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005968-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qx7htg
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sepedophilus armatus (Sharp, 1888)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 70 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0217024-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10946249
title: Water Solvent Reorganization upon Ultrafast Resonant Stimulated X‑ray Raman Excitation of a Metalloporphyrin Dimer

description: Abstract

We propose an X-ray Raman pump - X-ray diffraction probe scheme to follow solvation dynamics upon charge migration in a solute molecule. The X-ray Raman pump selectively prepares a valence electronic wavepacket in the solute, while the probe provides information on the entire molecular ensemble. A combination of Molecular Dynamics (MD) and ab initio quantum chemistry simulations is applied to a Zn-Ni porphyrin dimer in water. Using time-resolved X-ray diffraction and pair distribution functions, solvation shell dynamics are extracted.

Datasets for the plots

data_rdf: Contains RDF data in netcdf4 (readable by xarray) and averaged CSV files.

data_sfac: Contains scattering data in netcdf4 (readable by xarray) and averaged CSV files.

data_ener: Contains CP2K energy file data for all reference and production runs.

data_cdf: Contains csv data files for cumulative distribution function.

data_sdf: Contains the cubes files for spatial distribution function.

python_codes: Contains python code snippets for recreating figures from the above datasets.