cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/m5p5c-ghd85
title: JV9082_K3_janelia

description: JV9082:DotF-sfGFP fusion
description: <strong>Tilt Series Date:</strong> 2019-12-02</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 3.0°, constant angular increment, dosage: 90.0 eV/Å²,  defocus: -2.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Joseph P. Vogel, Washington University School of Medicine. Data collected and processed by Debnath Ghosal.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in AYE liquid culture with following supplements: ferric nitrate, cysteine hydrochloride and thymidine.</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 4.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Data collected at Janelia Krios (K3 camera). Mag: 26000, pixel size: 2.61A. Defocus range -2 to -4 um.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-12-02-7/rawdata/</p>9082_Box1_No1_S119.mrc,  Tilt Series (Pixel Size 0.261 nm), 1.7 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        9082_Box1_No1_S119_full.rec,  Reconstruction (Pixel Size 1.044 nm), 737.3 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.vw6awr
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Rhodiola himalensis"
 ]
}

 The dataset includes 143 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005993-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/gcfyy-32706
title: Hpylori_dFliF_FISE

description: These are H_pylori cells that are lacking FliP protein. In these cells, FliF protein was knocked out  .  to examine its relation to the hat-like complex.
description: <strong>Tilt Series Date:</strong> 2020-10-08</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Helicobacter pylori</p>
<strong>Strain:</strong> 26695</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -8.0 μm,  magnification: 19500x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> The cells were prepared and sent by Carrie Schaffer from the university of Kentucky. The cells were grown at 37C with 5% CO2 on sheep blood agar plates for 2 days from a -80C. No growth was seen . on the plates after 24 hr therefore the plates were kept in the . incubator for another 24Hr.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> The samples were prepared with Vitrobot IV. Blotting conditions were either: blot force 6, blot . time 3, drain time 1 OR blot force -3, blot time 4, drain time 1, 100%  humidity. Cu grids. 10 nm . gold</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2020-10-08-265/rawdata/</p>Hpylori_DFliF_FISE_260.mrc,  Tilt Series (Pixel Size 0.452 nm), 1.9 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        Hpylori_DFliF_FISE_260_full.rec,  Reconstruction (Pixel Size 1.808 nm), 737.3 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.yvvdtf
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Parthenocissus quinquefolia",
 "Country is Armenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003221-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8tkeqg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Parthenocissus quinquefolia",
 "Country is Bosnia and Herzegovina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003222-250827131500795/datasets/export for details.
DOI: 10.15468/dl.6m73bc
title: Occurrence Download

description: A dataset containing 1741 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Podarcis erhardii",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-6.6 29.26705, -6.6 50.94, 40.81373 50.94, 40.81373 29.26705, -6.6 29.26705))",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Material sample)"
 ]
}

 The dataset includes 1741 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003220-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xq4z56
title: Occurrence Download

description: A dataset containing 630290 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "Continent is North America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 630290 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003202-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wjc67w
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Parthenocissus quinquefolia",
 "Country is Croatia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 58 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003223-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7uhzbe
title: Occurrence Download

description: A dataset containing 9944 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sarcoptiformes",
 "Year is one of (1999, 2000, 2001, 2005, 2006, 2007, 2011, 2012, 2013, 2017, 2018, 2019)",
 "Continent is Europe",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Occurrence evidence, Observation)"
 ]
}

 The dataset includes 9944 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003225-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.20372/aau_rdm/sfybjg
title: Survival Status and Predictors of Mortality in Adults Undergoing Craniotomy For Traumatic Brain Injury: A Multi-Center Retrospective Cohort Study, Addis Ababa, Ethiopia

description: The Data was Survival Status and Predictors of Mortality in Adults Undergoing Craniotomy For Traumatic Brain Injury: A Multi-Center Retrospective Cohort Study, Addis Ababa, Ethiopia
DOI: 10.25934/pr00007913.1
title: Available IPD datapackage for study 'Phase 3, Multicenter, Randomized, Placebo-Controlled, Double-Blind Study to Evaluate Efficacy and Safety of Certolizumab Pegol in Subjects With Active Axial Spondyloarthritis (axSpA) Without X-Ray Evidence of Ankylosing Spondylitis (AS) and Objective Signs of Inflammation'

description: Patients with active Axial Spondyloarthritis without x-ray evidence of Ankylosing Spondylitis and with signs of inflammation will be randomly assigned to receive certolizumab pegol (CZP) 200 mg every two weeks or placebo. The primary objective is to demonstrate the efficacy of CZP in these patients.
DOI: 10.15468/dl.fxuk72
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Cheirotonus peracanus"
 ]
}

 The dataset includes 86 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003228-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mkbp8y
title: Occurrence Download

description: A dataset containing 325548 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Quercus robur",
 "Country is France"
 ]
}

 The dataset includes 325548 records from 2551 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003163-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16964588
title: N-gram Call Sequences of Wild Orangutans
DOI: 10.15151/esrf-es-2170327790
title: Structural Biology at EMBL Grenoble, IBS-CIBB and IAB

description: This proposal clusters crystallography and bioSAXS projects at the EMBL Grenoble, IBS-CIBB and IAB. It combines groups working on different topics with a major focus on cell signaling proteins, drug discovery, long non-coding RNAs, nucleic acid-protein complexes, and host-pathogen interactions. The proposers have long-standing experience in the use, as well as the development of beam lines for macromolecular crystallography and biological small angle X-ray scattering and have participated in successive BAG applications over the years, mostly at the ESRF but also at other synchrotrons. The BAG responsible is Andrew McCarthy (EMBL Grenoble) for this application round.
DOI: 10.5281/zenodo.16910287
title: Experimental Results for Vampire on the Equational Theories Project

description: Equational Theories Project is a collaborative effort, which explores the validity of certain first-order logic implications of certain kind. The project has been completed but triggered further research. This dataset shows how much can be automatically proven and disproven by the automated theorem prover Vampire.
DOI: 10.5281/zenodo.16910288
title: Experimental Results for Vampire on the Equational Theories Project

description: Equational Theories Project is a collaborative effort, which explores the validity of certain first-order logic implications of certain kind. The project has been completed but triggered further research. This dataset shows how much can be automatically proven and disproven by the automated theorem prover Vampire.
DOI: 10.60893/figshare.apl.29821007
title: Supplemetary material

description: supplemetary material
DOI: 10.60893/figshare.apl.29821007.v1
title: Supplemetary material

description: supplemetary material
DOI: 10.15468/dl.t4te99
title: Occurrence Download

description: A dataset containing 2773 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Mongolia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Capsella bursa-pastoris"
 ]
}

 The dataset includes 2773 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000343-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kcya93
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Silurus aristotelis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-6.6 29.26705, -6.6 50.94, 40.81373 50.94, 40.81373 29.26705, -6.6 29.26705))",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Observation, Material sample)"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000341-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kdmcf3
title: Occurrence Download

description: A dataset containing 89 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Wisteria sinensis",
 "Country is Portugal",
 "HasCoordinate is true"
 ]
}

 The dataset includes 89 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050236-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fnv6q4
title: Occurrence Download

description: A dataset containing 32109 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Quercus alba L.",
 "Year is greater than or equal to 1990",
 "Year is less than or equal to 2025",
 "HasCoordinate is true",
 {
 "not" : {
 "DatasetKey" : [
 "is Catalogue of Life"
 ]
 }
 }
 ]
}

 The dataset includes 32109 records from 155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0050189-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.77wdfw
title: Occurrence Download

description: A dataset containing 1410 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tillandsia punctulata Schltdl. & Cham."
 ]
}

 The dataset includes 1410 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022324-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p7cst9
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((13.16148 38.1008,13.21952 38.09101,13.27655 38.1008,13.27283 38.21621,13.21682 38.21148,13.16924 38.20203,13.16148 38.1008))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Larus michahellis J.F.Naumann, 1840",
 "Year 1500-2024"
 ]
}

 The dataset's 1 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022303-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ac5xdu
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Nepal, Bhutan, Bangladesh, Pakistan, China, India, Myanmar, Afghanistan)",
 "TaxonKey is Celaenorrhinus pero de Nicéville, 1889"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022326-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/24670
title: Chandra X-ray Observatory ObsId 24670

description: Trumpler 14: Laboratory for protoplanetary disk survival in harsh environments (GTO part)
DOI: 10.25574/25210
title: Chandra X-ray Observatory ObsId 25210

description: Mysterious structure of 3C58 PWN: What has changed in 20 years?
DOI: 10.15468/dl.grwrx4
title: Occurrence Download

description: A dataset containing 1052 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Quercus pagoda Raf.",
 "Year is greater than or equal to 1990",
 "Year is less than or equal to 2025",
 "HasCoordinate is true",
 {
 "not" : {
 "DatasetKey" : [
 "is Catalogue of Life"
 ]
 }
 }
 ]
}

 The dataset includes 1052 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000065-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/26401
title: Chandra X-ray Observatory ObsId 26401

description: Mysterious structure of 3C58 PWN: What has changed in 20 years?
DOI: 10.15468/dl.d55bqp
title: Occurrence Download

description: A dataset containing 1187 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is IISERTPT Squirrels of South Asia Database - Version1"
 ]
}

 The dataset includes 1187 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000128-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15793476
title: MD Data for "Structure and mechanism of the mitochondrial calcium transporter NCLX"

description: Molecular dynamics simulation data generated for "Structure and mechanism of the mitochondrial calcium transporter NCLX."
DOI: 10.5281/zenodo.15793477
title: MD Data for "Structure and mechanism of the mitochondrial calcium transporter NCLX"

description: Molecular dynamics simulation data generated for "Structure and mechanism of the mitochondrial calcium transporter NCLX."
DOI: 10.15468/dl.bfmq37
title: Occurrence Download

description: A dataset containing 4934 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((11.59666 48.14152,11.59562 48.14471,11.59378 48.14638,11.59096 48.14699,11.58826 48.14695,11.58428 48.14642,11.58054 48.14475,11.57993 48.14168,11.57981 48.13955,11.58048 48.13747,11.5863 48.13518,11.59157 48.13518,11.59427 48.13657,11.59672 48.14033,11.59666 48.14152))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 4934 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007254-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.szq65c
title: Occurrence Download

description: A dataset containing 1534 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sinodendron cylindricum"
 ]
}

 The dataset includes 1534 records from 128 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007253-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5mu39d
title: Occurrence Download

description: A dataset containing 373 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dipteryx oleifera"
 ]
}

 The dataset includes 373 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007257-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/89097-00r03
title: starved cells

description: Raw data files of starved cells
description: <strong>Tilt Series Date:</strong> 2009-06-17</p>
<strong>Data Taken By:</strong> Alasdair McDowall</p>
<strong>Species / Specimen:</strong> Campylobacter jejuni</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 0.0 eV/Å²,  defocus: 0.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> </p>
  amw2009-06-17-8_slicer6454.jpg: Flagella motor
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/amw2009-06-17-8/rawdata/</p>746_starv_015.st,  Tilt Series (Pixel Size 0.0 nm), 1.0 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        746_starv_015.rec,  Reconstruction (Pixel Size 0.0 nm), 314.6 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1nm9f-9e577
title: Vibrio cholerae (GFP-MreB)

description: Strain TRH7000 from Maria Sandkvist
description: <strong>Tilt Series Date:</strong> 2010-10-09</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> TRH7000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 0.0 eV/Å²,  defocus: 0.0 μm,  magnification: 0x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2010-10-09-1/rawdata/</p>10oct09a_at1_003.ali,  Tilt Series (Pixel Size 0.0 nm), 253.8 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        10oct09a_at1_003_full.rec,  Reconstruction (Pixel Size 0.0 nm), 838.9 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.makkdq
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Quercus crispifolia",
 "Year 1000-2025"
 ]
}

 The dataset includes 114 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007259-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.