cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30324842.v1
title: Graph-based Square-Root Estimation for Sparse Linear Regression

description: Sparse linear regression is one of the classic problems in the field of statistics, which has deep connections and high intersections with optimization, computation, and machine learning. To address the effective handling of high-dimensional data, the diversity of real noise, and the challenges in estimating standard deviation of noise, we propose a novel and general graph-based square-root estimation (GSRE) model for sparse linear regression. Specifically, we use square-root-loss function to encourage the estimators to be independent of the unknown standard deviation of error terms and design a sparse regularization term by using the graphical structure among predictors in a node-by-node form. Based on the predictor graphs with special structure, we highlight the generality by analyzing that the model in this article is equivalent to several classic regression models. Theoretically, we also analyze the finite sample bounds, asymptotic normality and model selection consistency of GSRE method without relying on standard deviation of error terms. In terms of computation, we employ the fast and efficient alternating direction method of multipliers. Finally, based on a large number of simulated and real data with various types of noise, we demonstrate the performance advantages of the proposed method in estimation, prediction and model selection. Supplementary materials for this article are available online.
DOI: 10.5281/zenodo.17795483
title: Harmonizing the Hubble Flow: Replication Data and Code

description: Replication package for the paper submitted to ApJL regarding the environmental dependency of the local distance ladder.
DOI: 10.17026/dans-znd-arxc
title: PAN-00121297 - terra sigillata plate type Halt. 3a / Drag. 15/17

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00121297&lt;/p&gt;
description: Modified: 2025-09-11T21:09:28+02:00
DOI: 10.15785/sbgrid/1223
title: X-Ray Diffraction data from Rv0097 G204F variant with vanadyl and CABA bound, source of 9PAU structure

description: Native dataset
DOI: 10.17026/ar/jetjhn
title: PAN-00026292 - closed finger ring with D-shaped cross-section

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00026292&lt;/p&gt;
description: Modified: 2025-07-25T14:03:36+02:00
DOI: 10.26030/dtc0-6s93
title: Longitudinal transcriptomic and epigenetic analysis in astronauts reveals dynamic immune response to spaceflight [DNA methylation]

description: The space industry has made significant strides, leading to an era of commercial spaceflight. Meanwhile, understanding molecular responses to spaceflight is crucial for astronauts' safety. To this end, we examined transcriptomic and epigenetic changes in two astronauts' blood samples at three timepoints: two weeks before spaceflight (T0), 24 hours after spaceflight (T2), and three months after spaceflight (T3). Transcriptomic analysis identified two gene clusters with opposing transient expression trends post-flight (T2), normalized at T3: one upregulated and the other downregulated. Mapped immune cell types through the CIBERSORT coupled with the pathway analysis suggested monocytes' role in coordinated cellular response. Epigenetic analysis identified four methylation patterns with transient and persistent changes post-flight, enriched in nervous system development and cell apoptosis pathways. Methylation changes implicated genes associated with bone disorders, including FBLIM1, IHH, and SCAMP2. eQTM analysis suggested a link between RNA transcriptional level and DNA methylation through transcriptional regulator ZNF684. In conclusion, our study revealed significant short-term transcriptional and methylation changes as well as long-term methylation changes. This study hosts the DNA methylation dataset. RNAseq dataset can be found in OSD-903.
DOI: 10.17026/ar/npwimc
title: PAN-00160704 - open arm ring with undifferentiated terminals

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00160704&lt;/p&gt;
description: Modified: 2025-08-29T11:57:55+02:00
DOI: 10.6084/m9.figshare.30768023
title: ZIKV Supplemental

description: Table-S1 to Table-S3 Raw morphological profiles of three independent experiments for Zika virus infection.Table-S4 Preprocessed morphological profiles for Zika virus infection.
DOI: 10.6084/m9.figshare.30768023.v1
title: ZIKV Supplemental

description: Table-S1 to Table-S3 Raw morphological profiles of three independent experiments for Zika virus infection.Table-S4 Preprocessed morphological profiles for Zika virus infection.
DOI: 10.15468/dl.422n48
title: Occurrence Download

description: A dataset containing 106437 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Lynx lynx"
 ]
}

 The dataset includes 106437 records from 257 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023298-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/0efoon
title: PAN-00173440 - wire brooch with angular bow

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00173440&lt;/p&gt;
description: Modified: 2025-05-30T17:22:19+02:00
DOI: 10.15468/dl.7nbbje
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Haiti",
 "OccurrenceStatus is Present",
 "TaxonKey is Boraginaceae"
 ]
}

 The dataset includes 31 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023312-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6qbxt3
title: Occurrence Download

description: A dataset containing 375932 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Panopeidae, Rhodomelaceae, Acanthuridae, Gobiidae, Pilumnidae, Ostreopsidaceae, Alpheidae, Vesiculariidae, Balanidae, Esperiopsidae, Sertulariidae, Actiniidae, Nolellidae, Anomiidae, Ceramiaceae, Corophiidae, Electridae, Mytilidae, Ascidiidae, Chordariaceae, Asteriidae, Austrobalanidae, Elminiidae, Capitellidae, Barentsiidae, Membraniporidae, Spionidae, Styelidae, Bugulidae, Buskiidae, Hormathiidae, Callyspongiidae, Cancridae, Caprellidae, Limulidae, Mycalidae, Portunidae, Caulerpaceae, Celleporidae, Chaetodontidae, Cladophoraceae, Champiaceae, Chironemidae, Scytosiphonaceae, Chondropsidae, Chthamalidae, Sphaeromatidae, Cionidae, Cirolanidae, Cirrholoveniidae, Cladonematidae, Microcionidae, Raspailiidae, Clavelinidae, Campanulariidae, Codiaceae, Cordylophoridae, Corellidae, Corynidae, Candidae, Calloporidae, Ostreidae, Cryptosulidae, Cutleriaceae, Cyclicoporidae, Dendyidae, Diadematidae, Diadumenidae, Dictyotaceae, Didemnidae, Holozoidae, Tubulariidae, Maeridae, Elphidiidae, Endeidae, Engraulidae, Limapontiidae, Ischyroceridae, Cypraeidae, Sabellidae, Cidaridae, Eudendriidae, Polycitoridae, Serpulidae, Lafoeidae, Galatheidae, Heteropiidae, Halymeniaceae, Wrangeliaceae, Paguridae, Haleciidae, Halisarcidae, Pyuridae, Hippopodinidae, Bitectiporidae, Holothuriidae, Nephropidae, Caryophylliidae, Halichondriidae, Gryphaeidae, Janolidae, Lepadidae, Grantiidae, Ligiidae, Limidae, Limnoriidae, Loxoconchidae, Eunicidae, Lysmatidae, Melitidae, Sinoflustridae, Penaeidae, Grapsidae, Pectinidae, Molgulidae, Crambeidae, Menippidae, Holocentridae, Sesarmidae, Trapezidae, Nereididae, Diaperoeciidae, Tetraclitidae, Goniodorididae, Blenniidae, Salmonidae, Ophiactidae, Ophiodermatidae, Ophiocomidae, Ophionereididae, Squillidae, Polynoidae, Smittinidae, Microdesmidae, Pennariidae, Amphinomidae, Phoronidae, Mastigiidae, Sargassaceae, Margaritidae, Plicatulidae, Plumulariidae, Polyceridae, Inachoididae, Bangiaceae, Clupeidae, Savignyellidae, Majidae, Schizoporellidae, Schizymeniaceae, Scophthalmidae, Siphogenerinoididae, Poaceae, Stenopodidae, Stenothoidae, Archaeobalanidae, Hesionidae, Symplectoscyphidae, Teredinidae, Tethyidae, Thalamoporellidae, Semelidae, Nassariidae, Ulvaceae, Alariaceae, Virgulinellidae, Watersiporidae, Scombridae, Serranidae)",
 "Geometry POLYGON ((179.214158 -37.160317, 173.147508 -32.990236, 170.246066 -32.916485, 171.828671 -38.410558, 166.289555 -43.707594, 163.739803 -47.576526, 167.080857 -49.382373, 178.686624 -40.913513, 179.214158 -37.160317))"
 ]
}

 The dataset includes 375932 records from 280 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023308-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17795492
title: Data files for "Neural reparameterization improves structural optimization"
DOI: 10.5281/zenodo.17795493
title: Data files for "Neural reparameterization improves structural optimization"
DOI: 10.15468/dl.8fa7wt
title: Occurrence Download

description: A dataset containing 10654099 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "StateProvince is one of (Oregon, Oregon (OR), Oregon (State))",
 "TaxonKey is Aves",
 "Year 2022-2024"
 ]
}

 The dataset includes 10654099 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023303-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cz5dd9
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-0.07949395463327881 51.50488462336882,-0.07571969178161254 51.50488462336882,-0.07571969178161254 51.50865888622048,-0.07949395463327881 51.50865888622048,-0.07949395463327881 51.50488462336882))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Coloeus monedula"
 ]
}

 The dataset includes 22 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023313-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/zmkb-x846
title: "A 3-Fold Fused Knowledge Graph Dataset for AI-Assisted Threat Mitigation in Smart Grids (Grid Components, Attacks, Experts)"

description: "This dataset presents a novel and comprehensive 3-fold Knowledge Graph (KG) designed as a foundational benchmark for AI-assisted threat mitigation in smart grids. It uniquely fuses disparate ontologies across three critical domains: Power Grid Components (specifically Inverter-Based Resources), Cybersecurity Threats (mapped to MITRE ATT&CK), and human Expert Profiles from academia and industry. The resulting heterogeneous graph explicitly links threats to targeted grid assets and qualified experts to specific mitigation tasks. Constructed through an AI-assisted pipeline, every node is enriched with high-dimensional semantic embeddings generated by Large Language Models (LLMs) from detailed textual descriptions. This dataset provides the essential ground truth structure and rich feature set required for developing and evaluating scalable graph learning models, such as Graph Neural Networks (GNNs), for automated threat analysis and precise expert recommendation. The data is provided in standard JSON format facilitating easy integration into machine learning workflows."
DOI: 10.17026/ar/lwwtak
title: PAN-00105254 - coin/coin-related, Septimius Severus (193-211), voor Julia Domna, denarius

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00105254&lt;/p&gt;
description: Modified: 2025-06-02T06:13:00+02:00
DOI: 10.5281/zenodo.17795581
title: Conceptual Framework for a Selective Prion-Targeting Small-Molecule Therapeutic: Molecular-Level Degradation of PrP\( ^{\text{Sc}} \) While Preserving Neuronal Proteome Integrity

description: Prion diseases, including transmissible spongiform encephalopathies (TSEs) such as Creutzfeldt-Jakob disease (CJD), are fatal neurodegenerative disorders arising from the templated misfolding of cellular prion protein (PrP\( ^{\text{C}} \)) into the \( \beta \)-sheet-enriched, pathogenic PrP\( ^{\text{Sc}} \) isoform. No effective treatments exist. We present a computational framework for PrionX-1, a bifunctional proteolysis-targeting chimera (PROTAC) that selectively recruits the ubiquitin-proteasome system to degrade PrP\( ^{\text{Sc}} \) aggregates while sparing PrP\( ^{\text{C}} \) and maintaining neuronal proteome homeostasis. Employing density functional theory (DFT) via PySCF, molecular dynamics (MD) simulations with SciPy, and Bayesian inference incorporating Markov chain Monte Carlo (MCMC) with Sobol sensitivity analysis, PrionX-1 integrates an efavirenz-derived warhead (PubChem CID: 64139) with a cereblon E3 ligase recruiter linked by polyethylene glycol. It exploits conformational differences in residues 89--140, yielding a binding free energy \( \Delta G_{\text{bind}} = -11.8 \) kcal mol\( ^{-1} \) and 3.9:1 isoform selectivity, with simulated 79% PrP\( ^{\text{Sc}} \) reduction. Validation includes RDKit-derived physicochemical descriptors (efavirenz moiety: LogP=4.073; MW=315.678 Da), empirical benchmarks, global sensitivity (\( S_T^\beta=0.62 \)), uncertainty propagation (posterior mean \( \mu=0.644 \), 95% highest density interval [0.550, 0.733]), and falsifiability criteria (\( p<0.01 \)). This rigorous integration of computational pharmacology, structural virology, and statistical inference advances isoform-selective therapeutics for prion diseases.
DOI: 10.15785/sbgrid/1233
title: X-Ray Diffraction data from Rv0097 ternary complex, source of 9PCM structure

description: Native dataset
DOI: 10.15468/93bfr8
title: Línea de base de la diversidad del ají y rocoto peruano con fines de bioseguridad

description: El género Capsicum consta de 42 especies, cinco de ellas domesticadas, todas estas más nueve especies silvestres con dos variedades botánicas, están presentes dentro del territorio peruano. Las especies de ají y rocoto están distribuidas por regiones naturales y zonas agroecológicas, se cultivan con prácticas agrícolas tradicionales, cada región natural del Perú tiene su cultivar de ají, el mochero en la chala, especialmente en el norte, el rocoto a lo largo de las yungas y los Andes, mientras que el charapita es común en la rupa rupa y la omagua.
DOI: 10.17026/ar/j5dg28
title: PAN-00178485 - pendant with triangular loop

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00178485&lt;/p&gt;
description: Modified: 2025-08-13T13:57:40+02:00
DOI: 10.15468/dl.ppcu57
title: Occurrence Download

description: A dataset containing 855397 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Alchemilla, Alchemilla velebitica, Alchemilla vulgaris, Allium schoenoprasum, Allium victorialis, Alyssum montanum, Alyssum scardicum, Amphoricarpos autariatus, Amphoricarpos neumayerianus, Androsace obtusifolia, Androsace villosa)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 855397 records from 1575 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023309-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4qhuu7
title: Occurrence Download

description: A dataset containing 11600 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "DatasetKey is EOD – eBird Observation Dataset",
 "TaxonKey is Circus cyaneus (Linnaeus, 1766)"
 ]
}

 The dataset includes 11600 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127060-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ku34b8
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elwendia salsa (Korovin) Pimenov & Kljuykov"
 ]
}

 The dataset includes 43 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036912-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6cxyln
title: Occurrence Download

description: A dataset containing 739 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Parachromis managuensis (Günther, 1867)"
 ]
}

 The dataset includes 739 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008539-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xkmq5e
title: Occurrence Download

description: A dataset containing 857 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Paspalum distichum L."
 ]
}

 The dataset includes 857 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002334-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pep3ke
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Drypetes celebica (Boerl. & Koord.) Pax & K.Hoffm."
 ]
}

 The dataset includes 26 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036964-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eukku3
title: Occurrence Download

description: A dataset containing 179 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Chile",
 "TaxonKey is Anthriscus caucalis M.Bieb."
 ]
}

 The dataset includes 179 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054394-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.acr2ar
title: Occurrence Download

description: A dataset containing 7296 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melanocharitidae"
 ]
}

 The dataset includes 7296 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0223200-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.26nh3t
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dracaena halemanuensis Jankalski"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037088-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eqmpgj
title: Occurrence Download

description: A dataset containing 734 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Schultesia guianensis (Aubl.) Malme"
 ]
}

 The dataset includes 734 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081830-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kc4gxe
title: Occurrence Download

description: A dataset containing 5903 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cyperus haspan L."
 ]
}

 The dataset includes 5903 records from 266 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090474-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tszpe0
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Uganda",
 "TaxonKey is Lycophidion ornatum Parker, 1936"
 ]
}

 The dataset includes 40 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008540-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ec6zyd
title: Occurrence Download

description: A dataset containing 213 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Accipiter rhodogaster (Schlegel, 1862)"
 ]
}

 The dataset includes 213 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036840-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7sx49v
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is CardObs : Observations naturalistes issues de l'outil CardObs-Données naturalistes d'Yves BAS",
 "TaxonKey is Theba pisana (O.F.Müller, 1774)"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127056-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zb52n9
title: Occurrence Download

description: A dataset containing 64 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Margaritopsis carrascoana (Delprete & E.B.Souza) C.M.Taylor & E.B.Souza"
 ]
}

 The dataset includes 64 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087935-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nv5eze
title: Occurrence Download

description: A dataset containing 18342 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brassica tournefortii Gouan"
 ]
}

 The dataset includes 18342 records from 201 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0117776-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.