cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.11504859
title: Met Office UKCP Local CPM precipitation ML emulator dataset

description: Met Office UKCP Local CPM precipitation ML emulator dataset

 

This is a collection of two datasets: one sourced from CPM data (bham_gcmx-4x_12em_psl-sphum4th-temp4th-vort4th_eqvt_random-season.tar.gz) and one sourced from GCM data (bham_60km-4x_12em_psl-sphum4th-temp4th-vort4th_eqvt_random-season.tar.gz). Each dataset is made up of climate model variables extracted from the Met Office's storage system, combining many variables over many years. It consists of 3 NetCDF files (train.nc, test.nc and val.nc), a YML ds-config.yml file and a README (similar to this one but tailored to the source of the data). Code used to create the dataset can be found here: https://github.com/henryaddison/mlde-data (specifically the v0.1.0 tag: https://github.com/henryaddison/mlde-data/tree/v0.1.0).

 

The YML file contains the configuration for the creation of the dataset, including the variables, scenario, ensemble members, spatial domain and resolution, and the scheme for splitting the data across the three subsets.

 

Each NetCDF contains the same variables but split into different subsets (train, val and test) of the based on time dimension.

Otherwise the NetCDF files have the sames dimensions and coordinates for ensemble_member, grid_longitude and grid_latitude.



Spatial resolution: This has two parts - the resolution of the data and the grid resolution stored at in the file. For predictand variables this is 2.2km variables coarsened 4 times to 8.8km (this is the target grid). For predictor variables this is 2.2km variables conservatively regriddded to GCM 60km grid or variables from GCM (so already on 60km grid) then regrid (nearest neighbour) to the target grid of predictands. In the naming convention of resolution used in config files, 60km resolution is synonamous with the GCM grid and 2.2km resolution is synonamous with the CPM grid.

Spatial domain: A 64x64 section of the 8.8km target grid covering England and Wales

Time resolution: daily

Time domain: 1st Dec 1980 to 30th Nov 2000; 1st Dec 2020 to 30th Nov 2040; 1st Dec 2060 to 30th Nov 2080. Uses a 360-day calendar.

Scenario: RCP8.5

Ensemble Members: 01, 04-13 & 15 (these correspond to the 12 ensemble member runs from the CPM but don't carry intrinsic meaning).

Split scheme: 70% training, 15% validation, 15% testing, split by choosing complete seasons at random, with an equal number of each season from each of the 3 time periods.


 

Predictor variables



 psl (hPa) - mean sea level pressure

temp850, temp700, temp500, temp250 - air temperature (K) at 850, 700, 500 and 250 hPa

vorticity850, vorticity700, vorticity500, vorticity250 - relative vorticity (s^-1) at 850, 700, 500 and 250 hPa

spechum850, spechum700, spechum500, spechum250 - specific humidity at 850, 700, 500 and 250 hPa


 

Predictand variable



target_pr - precipitation rate (mm/day)
DOI: 10.5281/zenodo.15096536
title: Met Office UKCP Local CPM precipitation ML emulator dataset

description: Met Office UKCP Local CPM precipitation ML emulator dataset

This is a collection of two datasets: one sourced from CPM data (bham64_ccpm-4x_12em_psl-sphum4th-temp4th-vort4th_pr.tar.gz) and one sourced from GCM data (bham64_gcm-4x_12em_psl-sphum4th-temp4th-vort4th_pr.tar.gz). Each dataset is made up of climate model variables extracted from the Met Office's storage system, combining many variables over many years. It consists of 3 NetCDF files (train.nc, test.nc and val.nc), a YML ds-config.yml file and a README (similar to this one but tailored to the source of the data). Code used to create the dataset can be found here: https://github.com/henryaddison/mlde-data (specifically the james-submission tag).

The YML file contains the configuration for the creation of the dataset, including the variables, scenario, ensemble members, spatial domain and resolution, and the scheme for splitting the data across the three subsets.

Each NetCDF contains the same variables but split into different subsets (train, val and test) of the based on time dimension.

Otherwise the NetCDF files have the sames dimensions and coordinates for ensemble_member, grid_longitude and grid_latitude.



Spatial resolution: This has two parts - the resolution of the data and the grid resolution stored at in the file. For predictand variables this is 2.2km variables coarsened 4 times to 8.8km (this is the target grid). For predictor variables this is 2.2km variables conservatively regriddded to GCM 60km grid or variables from GCM (so already on 60km grid) then regrid (nearest neighbour) to the target grid of predictands. In the naming convention of resolution used in config files, 60km resolution is synonamous with the GCM grid and 2.2km resolution is synonamous with the CPM grid.

Spatial domain: A 64x64 section of the 8.8km target grid covering England and Wales

Time resolution: daily

Time domain: 1st Dec 1980 to 30th Nov 2000; 1st Dec 2020 to 30th Nov 2040; 1st Dec 2060 to 30th Nov 2080. Uses a 360-day calendar.

Scenario: RCP8.5

Ensemble Members: 01, 04-13 & 15 (these correspond to the 12 ensemble member runs from the CPM but don't carry intrinsic meaning).

Split scheme: 70% training, 15% validation, 15% testing, split by choosing complete seasons at random, with an equal number of each season from each of the 3 time periods.


 

Predictor variables



psl (hPa) - mean sea level pressure

temp850, temp700, temp500, temp250 - air temperature (K) at 850, 700, 500 and 250 hPa

vorticity850, vorticity700, vorticity500, vorticity250 - relative vorticity (s^-1) at 850, 700, 500 and 250 hPa

spechum850, spechum700, spechum500, spechum250 - specific humidity at 850, 700, 500 and 250 hPa


Predictand variable



target_pr - precipitation rate (mm/day)


 

UPDATE 2025-03-27: Dataset tars are renamed to make it clearer their source (ccpm for coarsened CPM and gcm for GCM).
DOI: 10.17632/cgf5ptrspm.1
title: Scuderi S, Kang T-Y, Jourdon A et al., Cell Stem Cell 2025 - Mendeley Data Figures

description: SUPPORTING DATA FIGURES for Scuderi, Kang, Jourdon et al., (2025). Specification of human brain regions with orthogonal gradients of WNT and SHH in organoids reveals patterning variations across cell lines. Cell Stem Cell. 

The PDF includes six supplementary figures with detailed titles and legends.

Mendeley Data Figure 1: scRNA cluster markers in organoids, RNA velocity, projection to fetal mouse brain, and disorder-risk genes expression. Related to Figure 2.
Mendeley Data Figure 2: Comparison of gene expression profiles and label transfer results between organoids and fetal brain atlas. Related to Figure 2.
Mendeley Data Figure 3: Differential expression of genes between Duo-MAPS position in progenitor cells, immunostaining quantifications across positions. Related to Figure 3.
Mendeley Data Figure 4: Donor- and line-dependent variations during patterning and in undifferentiated iPSCs. Related to Figure 5
Mendeley Data Figure 5: SCENIC-derived regulatory network analysis at d64. Related to Figure 6.
Mendeley Data Figure 6: Comparison and integration of Duo-MAPS cell type diversity with Human Neural Organoid Cell Atlas (HNOCA) datasets. Related to Figure 2 and 3.
DOI: 10.15468/3tvpfc
title: Mongolodiaptomus nakhonphanomensis sp. nov. (Copepoda, Calanoida, Diaptomidae) from north-eastern Thailand, with a note on M. pectinidactylus (Shen & Tai, 1964)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Watiroyram, Santi, Monongdern, Piyathida, Koompoot, Kamonwan (2025): Mongolodiaptomus nakhonphanomensis sp. nov. (Copepoda, Calanoida, Diaptomidae) from north-eastern Thailand, with a note on M. pectinidactylus (Shen & Tai, 1964). Zoosystematics and Evolution 101 (4): 1965-1983, DOI: 10.3897/zse.101.161679AbstractA new species of diaptomid copepod, Mongolodiaptomus nakhonphanomensis sp. nov., is described from surface water bodies in Nakhon Phanom Province, north-eastern Thailand. The new species is assigned to the M. mephistopheles (Brehm, 1933) species group and is morphologically most similar to M. pectinidactylus (Shen & Tai, 1964), a rare species in Thailand. It can be distinguished from M. pectinidactylus by the following characters: I) In females, the new species has asymmetrical lateral wings on pediger 5 and the second exopod of the fifth leg, whereas M. pectinidactylus (Shen & Tai, 1964) shows symmetry in these structures; II) the female of the new species has a shorter and more robust seta on the second exopod of the fifth leg compared to that of M. pectinidactylus; III) in males, the new species lacks a spinular row on the basis of the right fifth leg, which is present in M. pectinidactylus; IV) the second exopod of the male fifth leg in the new species is distally expanded, whereas it is oblong in M. pectinidactylus; V) the lateral spine of the second exopod of the male fifth leg is bent outwards in the new species, whereas it is straight in M. pectinidactylus. A brief re-description of M. pectinidactylus and a comparison with the new species are provided. This discovery raises the number of recognised species in the genus Mongolodiaptomus to fifteen worldwide. A biogeographical map is also presented.
DOI: 10.15468/xv2ntb
title: Sur deux nouvelles Zouga Distant, 1906, originaires du Maroc, et l'étonnante membranisation sous-abdominale des mâles (Homoptera, Cicadoidea, Tibicinidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Boulard, Michel (1994): Sur deux nouvelles Zouga Distant, 1906, originaires du Maroc, et l'étonnante membranisation sous-abdominale des mâles (Homoptera, Cicadoidea, Tibicinidae). BULLETIN DE LA SOCIÉTÉ ENTOMOLOGIQUE SUISSE 67: 457-468, DOI: 10.5169/seals-402576, URL: http://dx.doi.org/10.5169/seals-402576On two new species of Zouga Distant, 1906 from Morocco (Homoptera, Cicadoidea, Tibicinidae), and on the amazing membraneous sternites in the males. - After revising the description of the two new species belonging to the genus Zouga Distant (Cicadoidea, Tibicinidae) from Morocco, we deal with the particular ventral structure of the abdomen (membranous sternites, secondary ventral cavity) in the males in these cicadas.
DOI: 10.15468/dl.8xytsz
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei)",
 "TaxonKey is one of (Artemisia intramongolica H.C.Fu & Z.Y.Zhu, Oligosporus halodendron (Turcz. ex Besser) Poljakov, Artemisia halodendron Turcz. ex Besser)"
 ]
}

 The dataset includes 154 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005835-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gplcxg
title: Occurrence Download

description: A dataset containing 107273 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Algeria"
 ]
}

 The dataset includes 107273 records from 519 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005808-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8hracu
title: Occurrence Download

description: A dataset containing 333 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Ateleia insularis Standl.",
 "TaxonKey is Ateleia tumida Mohlenbr.",
 "TaxonKey is Ateleia standleyana Mohlenbr.",
 "TaxonKey is Ateleia acunae A.Barreto",
 "TaxonKey is Ateleia guaraya Herzog",
 "TaxonKey is Ateleia martinezii J.Linares",
 "TaxonKey is Ateleia peltaria D.Dietr.",
 "TaxonKey is Ateleia ovata Mohlenbr.",
 "TaxonKey is Ateleia bissei A.Barreto",
 "TaxonKey is Ateleia microcarpa (Pers.) D.Dietr.",
 "TaxonKey is Ateleia roigii A.Barreto",
 "TaxonKey is Ateleia DC., 1826",
 "TaxonKey is Ateleia glabrata J.Linares",
 "TaxonKey is Ateleia chicoasensis J.Linares",
 "TaxonKey is Ateleia pterocarpa Millsp., 1895",
 "TaxonKey is Myroxylon L.f.",
 "TaxonKey is Ateleia chiangii J.Linares",
 "TaxonKey is Ateleia multijuga Hitchc.",
 "TaxonKey is Ateleia gummifera (Bertero ex DC.) D.Dietr.",
 "TaxonKey is Ateleia cubensis Griseb.",
 "TaxonKey is Ateleia tomentosa Rudd",
 "TaxonKey is Ateleia parvifoliola Mohlenbr."
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 333 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005808-160509122628363/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h1hirv
title: Occurrence Download

description: A dataset containing 9049 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Regulus calendula (Linnaeus, 1766)",
 "Country is Mexico"
 ]
}

 The dataset includes 9049 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005808-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rremvs
title: Occurrence Download

description: A dataset containing 1307 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((39.03002 -16.85072,40.31823 -16.85072,40.31823 -16.12013,39.03002 -16.12013,39.03002 -16.85072))"
 ]
}

 The dataset includes 1307 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027938-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5tc9uv
title: Occurrence Download

description: A dataset containing 1147 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cutandia memphitica (Spreng.) Benth."
 ]
}

 The dataset includes 1147 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0155134-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kheaxu
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cuscuta woodsonii Yunck."
 ]
}

 The dataset includes 50 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0155118-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m74wmt
title: Occurrence Download

description: A dataset containing 153 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kalanchoe thyrsiflora Harv."
 ]
}

 The dataset includes 153 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005809-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cebpof
title: Occurrence Download

description: A dataset containing 112 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eichhornia crassipes (Mart.) Solms",
 "Country is Brazil",
 {
 "or" : [
 "Year is 2012",
 "Year is 2011",
 "Year is 2010",
 "Year is 2015",
 "Year is 2014",
 "Year is 2013"
 ]
 }
 ]
}

 The dataset includes 112 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005809-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mjb4uy
title: Occurrence Download

description: A dataset containing 816 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Urban flora of Kostanay region (Republic of Kazakhstan)"
 ]
}

 The dataset includes 816 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0155128-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ribycq
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Balaenoptera brydei Olsen, 1913"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005809-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kgyxdz
title: Occurrence Download

description: A dataset containing 2048 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cutandia maritima (L.) Barbey"
 ]
}

 The dataset includes 2048 records from 116 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0155133-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8rewhh
title: Occurrence Download

description: A dataset containing 9621 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Turdus rufopalliatus Lafresnaye, 1840",
 "Country is Mexico"
 ]
}

 The dataset includes 9621 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005809-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kh95jb
title: Occurrence Download

description: A dataset containing 243 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyanaeorchis arundinae (Rchb.f.) Barb.Rodr."
 ]
}

 The dataset includes 243 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0155150-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lmi9mu
title: Occurrence Download

description: A dataset containing 161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heliconia L.",
 "Country is Guatemala"
 ]
}

 The dataset includes 161 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005809-170627171947987/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tm6rje
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Carex kashmirensis C.B.Clarke",
 "Year 1950-2023"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0155162-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x3xe94
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cryptodromia fallax (Lamarck, 1818)"
 ]
}

 The dataset includes 34 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053889-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p4sv2p
title: Occurrence Download

description: A dataset containing 322 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pseudopyrochroa Pic, 1906",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 322 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0209832-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.439fxq
title: Occurrence Download

description: A dataset containing 1592 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lycaon pictus (Temminck, 1820)"
 ]
}

 The dataset includes 1592 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0155173-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ap54zb
title: Occurrence Download

description: A dataset containing 254909 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-56.041259765625 -27.324438970884795, -56.0467529296875 -27.465875662914712, -55.8380126953125 -27.835675802176954, -55.78857421874999 -28.039500889086742, -55.5963134765625 -28.175170255755503, -55.52490234375 -28.160642462712232, -55.1898193359375 -27.87452925947934, -55.1348876953125 -27.923076490247894, -54.931640625 -27.75792714848945, -54.8162841796875 -27.602263247239865, -54.5416259765625 -27.519476682265513, -54.2669677734375 -27.451252675661056, -54.16259765625 -27.309797269034537, -53.98681640625 -27.285390139046278, -53.8494873046875 -27.280508069246864, -53.8055419921875 -27.148611173988627, -53.6297607421875 -26.88924960869345, -53.6956787109375 -26.604736292939098, -53.63525390625 -26.240707330754397, -53.78906249999999 -25.954587272647704, -53.85498046874999 -25.63310728855667, -54.0362548828125 -25.474520940004556, -54.5416259765625 -25.573662006794645, -54.6624755859375 -25.623201794365194, -54.656982421875 -26.003968207926448, -54.7064208984375 -26.285042436494955, -54.82177734374999 -26.55561042768458, -55.074462890625 -26.78141460665893, -55.1788330078125 -26.913743234557163, -55.272216796875 -26.923539197115453, -55.45349121093749 -26.96761050083536, -55.4974365234375 -27.0997208852071, -55.5853271484375 -27.07037645879754, -55.6732177734375 -27.187708010181193, -55.66772460937499 -27.33419903162599, -55.755615234375 -27.38298644164404, -56.041259765625 -27.324438970884795))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 254909 records from 240 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005809-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ajdp68
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyananthus lichiangensis W.W.Sm."
 ]
}

 The dataset includes 110 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0155164-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.