cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p13cbg7g
title: Micro-Raman spectroscopy parameters investigating biochar's carbon stability and structural development in comparison to fusinite and semifusinite

description: Semifusinite and fusinite macerals are formed through carbonization of plant material in naturally occurring wildfires. Both macerals, belonging to the inertinite maceral group, are carbon-rich and oxygen-poor, and are typical constituents of charcoal. The charring of plant material into charcoal serves as nature’s method for storing carbon over geological timescales. The permanence and stability of carbon in biochar formed by pyrolysis of biomass are determined by its degree of carbonization, and long-term storage in soil assumes that the biomass has been completely transformed into inertinite biochar. Inertinite biochar is thought to have a structural composition comparable to natural fusinite, whereas less carbonized and less stable biochar is similar to semifusinite. In this study, micro-Raman spectroscopy was employed to examine the structural composition of 16 biochar samples produced at different temperatures from various lignocellulosic feedstocks, as well as one natural semifusinite isolated from a coal deposit. The estimated carbonization temperatures, representing the actual internal heating temperatures experienced by the biomass, ranged from 326–825 °C. The micro-Raman results of the biochar samples included in this data release were compared with previously published micro-Raman data on semifusinite and fusinite.
DOI: 10.15468/dl.vybrnm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_2_GID","value":"IND.28.13_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009539-260108223611665/datasets/export for details.
DOI: 10.5281/zenodo.18248004
title: Baccharis tucumanensis Hook. & Arn. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:42
DOI: 10.5281/zenodo.18248005
title: Baccharis tucumanensis Hook. & Arn. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:42
DOI: 10.15468/dl.pknkz2
title: Occurrence Download

description: A dataset containing 42682 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Abramis brama",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2004"
 ]
}

 The dataset includes 42682 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009538-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18248012
title: Baccharis ulicina Hook. & Arn. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:42
DOI: 10.5281/zenodo.18248013
title: Baccharis ulicina Hook. & Arn. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:42
DOI: 10.15468/dl.y6jwz8
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_2_GID","value":"USA.37.11_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009542-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18247857
title: HGDP+1000 Genomes Project AncPack Reference Objects

description: Default AncPack RDS reference object and panel SNPs for use with the ancpack R package.

These were generated based on the following HGDP+1000G files released as part of gnomADv3.1 (see Koenig et al. 2024).



Sample info for HGDP+1000G with PC outliers removed

HGDP+1000G PLINK files including LD-pruned, common (>1%) sites
DOI: 10.5281/zenodo.18247858
title: HGDP+1000 Genomes Project AncPack Reference Objects

description: Default AncPack RDS reference object and panel SNPs for use with the ancpack R package.

These were generated based on the following HGDP+1000G files released as part of gnomADv3.1 (see Koenig et al. 2024).



Sample info for HGDP+1000G with PC outliers removed

HGDP+1000G PLINK files including LD-pruned, common (>1%) sites
DOI: 10.17632/th5mryvvmz.1
title: original data for the manuscript: Reprogramming orthogonal regulatory and metabolic system for efficient erythromycin production

description: This dataset corresponds to the raw experimental data for the manuscript "Reprogramming orthogonal regulatory and metabolic system for efficient erythromycin production". It includes:
1. “Fig 2.xlsx”：Raw data supporting the "Development of orthogonal artificial control system" chapter in the main text. 
2. “Fig 3.xlsx”：Raw data supporting the "Orthogonal PCoA and MMCoA supply module" chapter in the main text. 
3. “Fig 4.xlsx”：Raw data supporting the "Fine-tuning the stoichiometry of precursors guided by in vivo kinetics" chapter in the main text. 
4. “Fig 5.xlsx”：Raw data supporting the "Orthogonal methyl donor module" chapter in the main text. 
5. “Fig 6.xlsx”：Raw data supporting the "Orthogonal desosamine and mycarose supply module" chapter in the main text. 
6. “Fig 7.xlsx”：Raw data supporting the "Scale-up of the final strain with reprogrammed orthogonal regulatory and metabolic system" chapter in the main text. 
7. “Sup Fig .xlsx”：Raw data supporting the Supplementary Figures corresponding to this manuscript
DOI: 10.5281/zenodo.18248024
title: Baccharis uncinella DC. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:42
DOI: 10.5281/zenodo.18248025
title: Baccharis uncinella DC. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:42
DOI: 10.17632/wjr6m4xdvj
title: AI classroom dataset

description: artificial intelligence classroom dataset
DOI: 10.17632/wjr6m4xdvj.1
title: AI classroom dataset

description: artificial intelligence classroom dataset
DOI: 10.3886/e244167
title: U.S. State Life Expectancy by Sex, 2020

description: The dataset presents life expectancy at birth estimates based on annual complete period life tables for each of the 50 states and the District of Columbia (D.C.)
in 2020 for the total, male and female populations.
description: (Downloaded 1/9/2026)
DOI: 10.3886/e244167v1
title: U.S. State Life Expectancy by Sex, 2020

description: The dataset presents life expectancy at birth estimates based on annual complete period life tables for each of the 50 states and the District of Columbia (D.C.)
in 2020 for the total, male and female populations.
description: (Downloaded 1/9/2026)
DOI: 10.5281/zenodo.18248029
title: Baccharis velutina DC. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:42
DOI: 10.5281/zenodo.18248030
title: Baccharis velutina DC. In: Marchesi E., Mailhos A. & Bonifacino J.M. (Eds.). Flora Uruguaya: Flora Vascular del Uruguay. ISSN 3121-2050, V. 1.0.

description: Citable snapshot. Includes PDF and CSV of collections. Date: January 13th, 2026 at 16:42
DOI: 10.13140/rg.2.2.10694.13129
title: Companion-Paper-Implications of Recursive Coherence as a Physical Mechanism .pdf
DOI: 10.15468/dl.s5sykg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_2_GID","value":"IND.28.14_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009545-260108223611665/datasets/export for details.
DOI: 10.15468/dl.kza9we
title: Occurrence Download

description: A dataset containing 6964 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "StateProvince is one of (Maine, Maine State, Maine, USA, maine, Massachusetts, Massachusetts (MA), Massachusetts (State), New Hampshire, New Hampshire (NH), New Hampshire (State), Connecticut, Connecticut (CT), Connecticut (State), Vermont, Vermont (State), Vermont (VT))",
 "TaxonKey is Acer saccharum",
 "Year 2015-2026"
 ]
}

 The dataset includes 6964 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009546-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hpx9ga
title: Occurrence Download

description: A dataset containing 29912 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Myriophyllum aquaticum, Myriophyllum heterophyllum, Nicotiana glauca, Nymphaea mexicana, Oenothera glazioviana, Oenothera stricta, Opuntia elata, Opuntia maxima, Opuntia tuna, Oxalis articulata, Oxalis debilis corymbosa, Oxalis latifolia, Oxalis pes-caprae, Oxalis purpurea, Paraserianthes lophantha, Parthenium hysterophorus, Paspalum paspalodes, Paspalum vaginatum, Paulownia tomentosa, Persicaria capitata, Persicaria perfoliata, Phyllostachys aurea, Physalis peruviana, Phytolacca americana, Phytolacca heterotepala)",
 "Country is Portugal",
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2001",
 "Year is less than or equal to 2026"
 ]
}

 The dataset includes 29912 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009544-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.26e4kv
title: Occurrence Download

description: A dataset containing 11402 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera pardus"
 ]
}

 The dataset includes 11402 records from 173 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009548-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18247963
title: München, Apotheke Khs. rechts d. Isar (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.5281/zenodo.18247964
title: München, Apotheke Khs. rechts d. Isar (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.15468/dl.cza8hu
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"equals","key":"GADM_LEVEL_2_GID","value":"USA.37.12_1","matchCase":false},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 34 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009549-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31069564
title: PASCAL VOC

description: The PASCAL VOC (Pattern Analysis, Statistical Modelling and Computational Learning Visual Object Classes) dataset is a classic benchmark dataset for general visual object recognition and detection, which covers 20 categories of common objects and has become an important reference for algorithm performance comparison in the field of computer vision due to its standardized evaluation system and open dataset partitioning scheme.
DOI: 10.6084/m9.figshare.31069564.v1
title: PASCAL VOC

description: The PASCAL VOC (Pattern Analysis, Statistical Modelling and Computational Learning Visual Object Classes) dataset is a classic benchmark dataset for general visual object recognition and detection, which covers 20 categories of common objects and has become an important reference for algorithm performance comparison in the field of computer vision due to its standardized evaluation system and open dataset partitioning scheme.
DOI: 10.15468/dl.s4686y
title: Occurrence Download

description: A dataset containing 2740 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "StateProvince is one of (Maine, Maine State, Maine, USA, maine, Massachusetts, Massachusetts (MA), Massachusetts (State), New Hampshire, New Hampshire (NH), New Hampshire (State), Connecticut, Connecticut (CT), Connecticut (State), Vermont, Vermont (State), Vermont (VT))",
 "TaxonKey is Ailanthus altissima",
 "Year 2015-2026"
 ]
}

 The dataset includes 2740 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009550-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/ph8jm2d8mh
title: Supplemental Figures - Clinical features associated with cutaneous angioinvasive fungal infections

description: Supplemental figures 1-3 for the brief report "Clinical features associated with cutaneous angioinvasive fungal infections"
DOI: 10.17632/ph8jm2d8mh.1
title: Supplemental Figures - Clinical features associated with cutaneous angioinvasive fungal infections

description: Supplemental figures 1-3 for the brief report "Clinical features associated with cutaneous angioinvasive fungal infections"
DOI: 10.6084/m9.figshare.31068118.v1
title: Data for culvert classification

description: There are clipped true and false samples for four study areas.DEM & Aerial photosSample size: 100*100 pixel (meter)
DOI: 10.17632/sbhj43dzzp
title: Data on the Philippine Studies on Microplastics: A Qualitative Meta-Synthesis Through Thematic Analysis

description: This dataset compiles a systematically curated collection of 45 peer-reviewed studies on microplastics (MPs) in the Philippines, synthesized for a qualitative meta-synthesis using thematic analysis. The dataset serves as the evidentiary basis for identifying descriptive and analytic themes related to the occurrence, distribution, and impacts of MPs across environmental and biological matrices in the Philippine context. Each entry represents a single published study retrieved primarily from credible sources, such as Web of Science, Google Scholar, Scopus, and PubMed, selected based on predefined inclusion criteria aligned with qualitative synthesis methodology. The dataset captures bibliographic, geographic, and thematic attributes necessary for transparent and reproducible thematic analysis.
DOI: 10.6084/m9.figshare.31068118
title: Data for culvert classification

description: There are clipped true and false samples for four study areas.DEM & Aerial photosSample size: 100*100 pixel (meter)
DOI: 10.17632/sbhj43dzzp.1
title: Data on the Philippine Studies on Microplastics: A Qualitative Meta-Synthesis Through Thematic Analysis

description: This dataset compiles a systematically curated collection of 45 peer-reviewed studies on microplastics (MPs) in the Philippines, synthesized for a qualitative meta-synthesis using thematic analysis. The dataset serves as the evidentiary basis for identifying descriptive and analytic themes related to the occurrence, distribution, and impacts of MPs across environmental and biological matrices in the Philippine context. Each entry represents a single published study retrieved primarily from credible sources, such as Web of Science, Google Scholar, Scopus, and PubMed, selected based on predefined inclusion criteria aligned with qualitative synthesis methodology. The dataset captures bibliographic, geographic, and thematic attributes necessary for transparent and reproducible thematic analysis.
DOI: 10.17632/wz28m3whm4
title: Planar polarization of endogenous ADIP during Xenopus neurulation

description: This dataset contains raw fluorescence microscopy images and corresponding image quantification files supporting the study “Planar polarization of endogenous ADIP during Xenopus neurulation,” published in Biology Open. Raw data consist of original images of Xenopus laevis embryos and explants acquired during neurulation to document endogenous ADIP localization under control and experimental conditions. Quantification files include processed outputs from a reproducible image analysis pipeline, such as polarity measurements, intensity profiles, and statistical data used for figure generation in the manuscript.
DOI: 10.17632/wz28m3whm4.1
title: Planar polarization of endogenous ADIP during Xenopus neurulation

description: This dataset contains raw fluorescence microscopy images and corresponding image quantification files supporting the study “Planar polarization of endogenous ADIP during Xenopus neurulation,” published in Biology Open. Raw data consist of original images of Xenopus laevis embryos and explants acquired during neurulation to document endogenous ADIP localization under control and experimental conditions. Quantification files include processed outputs from a reproducible image analysis pipeline, such as polarity measurements, intensity profiles, and statistical data used for figure generation in the manuscript.
DOI: 10.17632/7sh25c3j6n
title: Glycemia Shift Pancreatic Islets Rhythmicity via δ-α Cell in vivo, Impairment in Diabetes

description: Blood glucose homeostasis relies on the well-coordinated rhythmic activity of
millions of islets throughout the pancreas. Glucose triggers islet rhythmicity,
and paracrine signaling shapes it, but population-level dynamics in healthy and
diabetic pancreases in vivo remain unclear. Using simultaneous multi-islet Ca2+
imaging (20-100 islets per experiment) in both live mice and pancreatic tissue
slices, we systematically studied how glycemia fluctuations and intra-islet
paracrine signaling collectively shape the islet rhythmicity. In this study, we
report that a transition from Hyperglycemia to Euglycemia drove a coordinated
shift from Slow to Fast islet Ca2+ oscillations (HESF) in vivo. HESF was
conserved in pancreatic tissue slices, but not in dispersed single β cells in vitro,
linking the transition to paracrine signaling. Mechanistically, HESF arose from
α-cell activation, which is inhibited by δ cells during hyperglycemia. At high
glucose, individual islets behaved largely as autonomous oscillators and
differed in phase and period. In diabetic mice with unstable glycemia, islets lost
HESF, showed reduced sustained activity at hyperglycemia, and displayed
blunted glucose-dependent tuning both in vivo and in vitro. Notably, HESF
persisted in β-cell knockout Gcgr transgenetic mice in vivo and in vitro,
suggesting HESF’s dependence on Glp1r. Indeed, semaglutide restored HESF
in diabetic mice while stabilizing glycemia. These findings offer a
comprehensive understanding of how δ and α cells encode glycemic state into
islet rhythmicity to support stable blood glucose and how this encoding fails in
diabetes.

Video. 1 In vivo imaging of Ins1-Cre+/-; GCaMP6ff/+ mice. Hyperglycemia-to-Euglycemia Induces a coordinated Slow-to-Fast (HESF) Islet Ca2+ Oscillation Transition in vivo. Blood glucose, 3 islet Ca2+ traces from Ins1-Cre+/- ; GCaMP6ff/+ mice are shown.