cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.u7wzme
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Living Specimen",
 "TaxonKey is Cynodon Rich."
 ]
}

 The dataset includes 43 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014188-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d38y2g
title: Occurrence Download

description: A dataset listing the 39 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "Geometry POLYGON((-74.80852 -8.46985,-74.87378 -8.5342,-74.83027 -8.64568,-74.69341 -8.62484,-74.67076 -8.56411,-74.70429 -8.49704,-74.80852 -8.46985))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset's 39 records were derived from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014148-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ge48mn
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Living Specimen",
 "TaxonKey is Desmanthus Willd."
 ]
}

 The dataset includes 52 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014189-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dsuhsz
title: Occurrence Download

description: A dataset containing 371 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio nutans Sch.Bip."
 ]
}

 The dataset includes 371 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014190-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.bg7ajyop
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2409431 records)
DOI: 10.15468/dl.y3gqr5
title: Occurrence Download

description: A dataset containing 522 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Living Specimen",
 "TaxonKey is Desmodium Desv."
 ]
}

 The dataset includes 522 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014191-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5518/944
title: Thermal State QKD simulation results data set

description: Simulation results showing the changes in mutual information measurements as the strength of an eavesdropper’s attack is increased
DOI: 10.15468/dl.qvue8y
title: Occurrence Download

description: A dataset containing 239 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Living Specimen",
 "TaxonKey is Eragrostis Wolf"
 ]
}

 The dataset includes 239 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014192-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8pfz3a
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Living Specimen",
 "TaxonKey is Galactia P.Browne"
 ]
}

 The dataset includes 43 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014194-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ms8mbb
title: Occurrence Download

description: A dataset containing 13238 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is one of (Mozambique, Malawi)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Squamata, Amphibia)"
 ]
}

 The dataset includes 13238 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014193-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wphmvq
title: Occurrence Download

description: A dataset containing 1200 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Branchipus schaefferi Fischer, 1834"
 ]
}

 The dataset includes 1200 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014196-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57830/2306525
title: Straight Fork Road Bridge Construction Project

description: This data package was created 2024-10-17 17:52:53 by NPSTORET and includes selected project, location, and result data.

Data are from monitoring conducted to assess the potential impacts of the Straight Fork Road Bridge Construction Project in Great Smoky Mountains National Park. The Straight Fork road ford was replaced with a bridge in early 2006. The purpose of this project was to determine if the water quality during bridge construction from March 2006 through August 2006 was significantly different than the water quality prior to construction (October 2004 through September 2005).

Data contained in Great Smoky Mountains National Park NPSTORET back-end file (GRSM_NPSTORET_BE_20240510_20240510_1245.ACCDB) were filtered to include:

Organization:
- GRSM: Great Smoky Mountains National Park
Project:
- GRSM_SF: Straight Fork Road Bridge Construction Project
Station:
- Include Trip QC And All Station Visit Results
Value Status:
- Accepted or Certified (exported as Final) or Final

The data package is organized into five data tables:
- Projects.csv - describes the purpose and background of the monitoring efforts
- Locations.csv - documents the attributes of the monitoring locations/stations
- Results.csv - contains the field measurements, observations, and/or lab analyses for each sample/event/data grouping
- HUC.csv - enumerates the domain of allowed values for 8-digit and 12-digit hydrologic unit codes utilized by the Locations datatable
- Characteristics.csv - enumerates the domain of characteristics available in NPSTORET to identify what was sampled, measured or observed in Results

Period of record for filtered data is 2004-10-27 to 2004-10-27.  This data package is a snapshot in time of one National Park Service project. The most current data for this project, which may be more or less extensive than that in this data package, can be found on the Water Quality Portal at:
https://www.waterqualitydata.us/data/Result/search?project=GRSM_SF
DOI: 10.15468/dl.5sfbzp
title: Occurrence Download

description: A dataset containing 1814299 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is one of (Passerina cyanea (Linnaeus, 1766))",
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence)",
 "Year is greater than or equal to 1901",
 "Year is less than or equal to 2019",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1814299 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014143-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4z7kev
title: Occurrence Download

description: A dataset containing 1200 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Branchipus schaefferi Fischer, 1834"
 ]
}

 The dataset includes 1200 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014197-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fhcy8f
title: Occurrence Download

description: A dataset containing 2846 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Living Specimen",
 "TaxonKey is Glycine Willd."
 ]
}

 The dataset includes 2846 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014198-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27377595
title: FBD-SV-2024

description: The Flying Bird object Dataset in Surveillance Video (FBD-SV-2024) for surveillance video flying bird object detection algorithm development and performance evaluation.<br>The FBD-SV-2024 comprises 483 video clips, totaling 28,694 frames of images. Among these frames, 23,833 frames contain a total of 28,366 instances of flying birds.<br>Visit the GitHub repository for more data processing scripts: https://github.com/Ziwei89/FBD-SV-2024_githubTraining set: 400 video clips, totaling 23,979 frames of images.<br>Testing set: 83 video clips, totaling 4,715 frames of images.Due to the large size of image data, no images have been uploaded, but relevant Python scripts are provided. These scripts can be run to extract frames from the videos. See the readme_English.txt for more information.Please refer to the paper related to this dataset for more description of the characteristics of this dataset. The link of the paper : https://arxiv.org/abs/2409.00317<br>Please refer to the paper if the dataset is useful for your work:<br>@misc{sun2024fbdsv2024,<br>title={FBD-SV-2024: Flying Bird Object Detection Dataset in Surveillance Video},<br>author={Zi-Wei Sun and Ze-Xi Hua and Heng-Chao Li and Zhi-Peng Qi and Xiang Li and Yan Li and Jin-Chi Zhang},<br>year={2024},<br>eprint={2409.00317},<br>archivePrefix={arXiv},<br>primaryClass={cs.CV}<br>}Note: This dataset is for learning and research purposes only, not for commercial use.
DOI: 10.15468/dl.wg36w5
title: Occurrence Download

description: A dataset listing the 181 species recorded in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Molluscs of the Gothenburg Natural History Museum (GNM)",
 "Year 1000-1960"
 ]
}

 The dataset's 181 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014165-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21410/7e4/jndkur/ggnrdt
title: fr_cdsp_ddi_enef2017_v11_csv.zip

description: :unav
DOI: 10.21410/7e4/jndkur/jbbt8d
title: Documentation_ENEF2017_V11.pdf

description: :unav
DOI: 10.21410/7e4/jndkur
title: Enquête électorale française 2017 (ENEF 2017), Vague 11

description: Ce dispositif de suivi et de mesure de l’opinion permet l’analyse des évolutions de l’électorat français et de ses réactions aux événements politiques, sociaux et économiques à travers 20 vagues, depuis la veille des élections régionales de 2015 jusqu’au lendemain des élections législatives de 2017. Il permet des analyses détaillées au niveau national et régional pour saisir les évolutions de l’opinion articulées au contexte spécifique de la période préélectorale, électorale et postélectorale. Il fournit une série d’indicateurs et de mesures sur les tendances de l’électorat français, ses valeurs politiques, ses préférences partisanes, son rapport au vote et aux candidats. L'enquête détaille les ressorts psychologiques de la décision électorale à la lumière des valeurs des Français et des contextes politiques, géographiques et socio-économiques. Elle met également en évidence l’articulation entre le niveau national et le niveau local dans les caractéristiques de l’opinion. Enfin, la réception par l’opinion des thèmes inscrits à l’agenda politique par les candidats est une dimension importante, notamment pendant la période de campagne (Primaires, élection présidentielle, élections législatives). Cette onzième vague, menée en février 2017, visait à évaluer l’action du Président de la République, l’élection présidentielle, l’image des personnalités politiques et des principaux candidats, entre autres sujets ; 16 124personnes inscrites sur les listes électorales y ont participé.
DOI: 10.21410/7e4/jndkur/imyvh5
title: RapportTechnique_ENEF2017_V11.pdf

description: :unav
DOI: 10.21410/7e4/jndkur/jaysxn
title: Questionnaire_ENEF2017_V11.docx

description: :unav
DOI: 10.21410/7e4/jndkur/nzstb6
title: fr_cdsp_ddi_enef2017_v11_sas.zip

description: :unav
DOI: 10.21410/7e4/jndkur/o9juz8
title: fr_cdsp_ddi_enef2017_v11.xml

description: :unav
DOI: 10.21410/7e4/jndkur/s5j86m
title: fr_cdsp_ddi_enef2017_v11.tab

description: :unav
DOI: 10.21410/7e4/jndkur/tldur8
title: fr_cdsp_ddi_enef2017_v11-1.tab

description: :unav
DOI: 10.21410/7e4/jndkur/twxfjd
title: fr_cdsp_ddi_enef2017_v11_verbatim.zip

description: :unav
DOI: 10.58033/2eqd-4550
title: Pharmacogenetics of pregnancy‐induced changes in efavirenz pharmacokinetics (dataset)
DOI: 10.15468/dl.t9s9mw
title: Occurrence Download

description: A dataset containing 2481 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Côte d’Ivoire",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is EN",
 "OccurrenceStatus is Present",
 "TaxonKey is Pterocarpus erinaceus Poir."
 ]
}

 The dataset includes 2481 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014199-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5518/946
title: X-ray diffraction patterns for water ice at low pressures between 88-145 K - dataset

description: This dataset comprises experimental X-ray diffraction patterns of water ice of structure ice I deposited on a substrate within a vacuum chamber at pressures of 20 mbar and below at temperatures ranging from 88 – 145 K. The diffraction patterns are displayed as a function of 2Theta in degrees and sorted by the figures they appear in the associated journal article “The phase of water ice which forms in cold clouds in the mesospheres of Mars, Venus and Earth”. All diffraction signals are in arbitrary units.
DOI: 10.15468/dl.gtcjf5
title: Occurrence Download

description: A dataset containing 1646763 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lycopodiopsida"
 ]
}

 The dataset includes 1646763 records from 2339 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014089-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10582092
title: A supervised Graph-based deep learning algorithm to detect and quantify clustered particles

description: In this data repository, we provide the necessary data for replicating results, including both simulated and biological datasets. Additionally, the repository includes trained models to infer from these datasets.
description: Considerable efforts are currently being devoted to characterizing the topography of membrane-embedded proteins using combinations of biophysical and numerical analytical approaches. In the paper, we present an end-to-end (i.e., human intervention-independent) algorithm consisting of two concatenated binary Graph Neural Network (GNNs) classifiers with the aim of detecting and quantifying dynamic clustering of particles. As the algorithm only needs simulated data to train the GNNs, it is parameter-independent. The GNN-based algorithm is first tested on datasets based on simulated albeit biologically realistic data and validated on actual fluorescence microscopy experimental data. Application of GNN analysis is shown to be faster than existing DBSCAN-based approaches, with the additional advantage that the GNN-based method can be implemented on standard desktop computers. Furthermore, GNN models obtained via training procedures are reusable. To the best of our knowledge, this is the first application of GNN-based approaches to the analysis of particle aggregation, with potential applications to the study of nanoscopic particles like the nanoclusters of membrane-associated proteins in live cells.
description: Simulated Datasets.zip: This file includes simulated datasets in both .csv and their corresponding .txt files, providing comprehensive information about their simulation, such as the number of particles. The parameters used for these simulations are shown in Supplementary Table 1 of the paper.

Inference Datasets.zip: This file includes both STORM and TIRF datasets utilized for testing the Graph Neural Networks (GNNs) presented in the paper.

Trained models.zip: This file includes GNN1 and GNN2 models utilized in the paper. These pre-trained models can be employed for retraining or inference purposes.


In this GitHub repository, we provide scripts to show how GNNs are used to infer clustering processes from SMLM datasets.
description: Acknowledgements

Thanks are due to Eng. Hector Buena-Maizón for useful comments on the simulation procedure used in this work. Research work quoted in this review has been supported by multiple grants from the National Scientific and Technology Research Council of Argentina (CONICET) and grant PICT BID-CONICET  2015-2654 the Ministry of Science, Technology and Innovative Production of Argentina (Mincyt). Simulations were carried out using a Titan V GPU kindly donated by NVIDIA Corp. to Francisco J. Barrantes.
DOI: 10.15468/dl.3t3zg7
title: Occurrence Download

description: A dataset containing 236585 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Wild bees of Belgium"
 ]
}

 The dataset includes 236585 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043480-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hcbtdj
title: Occurrence Download

description: A dataset containing 285 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((104.96321 -6.64585,104.96297 -7.09545,107.34269 -8.05854,109.73922 -8.21532,113.25561 -8.75286,114.65544 -8.95443,114.72848 -8.69521,114.5269 -8.31445,114.5829 -8.00089,114.5493 -7.32897,112.95909 -7.22818,112.74631 -7.0266,112.58953 -6.65704,106.63182 -5.3468,105.9823 -5.77235,105.67993 -6.08591,104.96321 -6.64585))",
 "OccurrenceStatus is Present",
 "TaxonKey is Vestalis luctuosa (Burmeister, 1839)"
 ]
}

 The dataset includes 285 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043492-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nmu7dx
title: Occurrence Download

description: A dataset containing 655 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pygiopsyllidae"
 ]
}

 The dataset includes 655 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043494-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mwngp3
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((104.96321 -6.64585,104.96297 -7.09545,107.34269 -8.05854,109.73922 -8.21532,113.25561 -8.75286,114.65544 -8.95443,114.72848 -8.69521,114.5269 -8.31445,114.5829 -8.00089,114.5493 -7.32897,112.95909 -7.22818,112.74631 -7.0266,112.58953 -6.65704,106.63182 -5.3468,105.9823 -5.77235,105.67993 -6.08591,104.96321 -6.64585))",
 "OccurrenceStatus is Present",
 "TaxonKey is Drepanosticta sundana (Krüger, 1898)"
 ]
}

 The dataset includes 48 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043496-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pzwrkz
title: Occurrence Download

description: A dataset containing 3199 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhopalopsyllidae"
 ]
}

 The dataset includes 3199 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043495-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j6ckqm
title: Occurrence Download

description: A dataset containing 967 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Vallisneria natans (Lour.) H.Hara)",
 "HasCoordinate is true",
 "Year is greater than 1900"
 ]
}

 The dataset includes 967 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043497-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13144206
title: Timing matters: Late, but not early, exercise training ameliorates MASLD in part by modulating the gut-liver axis in mice. Part 4

description: Metadata for both experiments
DOI: 10.5281/zenodo.13144207
title: Timing matters: Late, but not early, exercise training ameliorates MASLD in part by modulating the gut-liver axis in mice. Part 4

description: Metadata for both experiments
DOI: 10.25345/c5n58cx95
title: MassIVE MSV000095492 - The C. elegans PTPN22 ortholog functions in diverse developmental processes
title: Non-receptor type protein tyrosine phosphatases (PTPNs) have been studied extensively in the context of the adaptive immune system, however, their roles beyond immunoregulation are less unexplored. Here we identify novel functions for the conserved C. elegans phosphatase, PTPN-22, establishing new links to worm molting, cell adhesion, and cytoskeletal regulation. Through a non-biased genetic screen, we found that loss of PTPN-22 phosphatase activity suppresses molting defects caused by loss-of-function mutations in the conserved NIMA-related kinases, NEKL-2 (human NEK8/9) and NEKL-3 (human NEK6/7), which act at the interface of membrane trafficking and actin regulation. To better understand the functions of PTPN-22 we carried out proximity labeling studies to identify candidate interactors of PTPN-22 during development. Through this approach we identified the CDC42 guanine-nucleotide exchange factor DNBP-1 (human DNMBP) as an in vivo partner of PTPN-22 and showed that loss of DNBP-1 also suppresses nekl-associated molting defects and partially co-localizes with PTPN-22 in the epidermis. Genetics analysis, co-localization studies, and proximity labeling also revealed roles for PTPN-22 in several epidermal adhesion complexes including C. elegans hemidesmosomes, suggesting that PTPN-22 plays a broad role in maintaining the structural integrity of tissues. Localization and proximity labeling also implicated PTPN-22 in functions connected to nucleocytoplasmic transport and mRNA regulation, particularly within the germline, as nearly one third of proteins identified by PTPN-22 proximity labeling are known P granule components. Collectively, our studies highlight the utility of combined genetic and proteomic approaches for identifying novel gene functions.
DOI: 10.6084/m9.figshare.26413837
title: Data tables for Variant calling, genotyping and association between genotype and homoeolog expression

description: This archive contains all files necessary to run related scripts on GitHub.