cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/135111
title: Anemometer data collected during research cruise SKQ201913T using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7244177.v1
title: Diallel analysis and inbreeding depression in agronomic and technological traits of cotton genotypes

description: ABSTRACT Cotton provides about 90% of the world textile fiber, and is one of the crops of greater industrial relevance. The objectives of this study were to estimate the inbreeding depressionand the genetic effects involved in the control of the agronomic andfiber quality traits in F1 and F2 generations and to identify promising hybrids for obtaining superior cotton genotypes. Two cultivars of upland cotton and two moco (Brazilian endemic) cotton were crossed using a half-diallel scheme. The following traits were evaluated: percentage of fibers and weight of one boll, fiber length, fiber uniformity, short fiber index, fiber strength, and micronaire index. The additive genetic effects are predominant in the evaluated agronomic and fiber quality traits. Cultivar FM 966 is the most suitable parent to compose crossing blocks for the improvement of cotton agronomic and fiber quality traits. The hybrids FM 966 × CNPA 7MH and FM 966 × BRS 286 are the most promising for obtaining segregating populations aiming to select superior genotypes. Inbreeding depression is more pronounced in the agronomic traits than in the fiber quality traits.
DOI: 10.6084/m9.figshare.7244174
title: Genetic diversity in oil palm (Elaeis guineensis Jacq) using RAM (Random Amplified Microsatellites)

description: ABSTRACT The oil palm (Elaeis guineensis Jacq) plays an important role in the economy of some tropical countries; Colombia ranks first for production in Latin America and fifth in the world. The aim of this research was to characterize the genetic variability of 51 oil palm genotypes from the Congo with seven randomly amplified microsatellite markers RAM. As a result, 241 alleles were generated andthe number of polymorphic loci ranged from 46 to 14 for the ACA and CGA primers, respectively. High genetic diversity was found, with a total heterozygosity of 0.64, along with a high percentage of polymorphic loci, 89%. The coefficient of genetic differentiation (Fst) was 0.15, indicating that there was moderate genetic differentiation. The genetic diversity study differentiated the 51 genotypes into four groups with a similarity of 0.52. The RAM technique detected the genetic variability of the palm genotypes and showed a high degree of polymorphism and sensitivity for discrimination. These results provide information that can be used to develop conservation strategies for palm germplasm and breeding programs to obtain more productive palm genotypes with superior quality and tolerance to major diseases.
DOI: 10.6084/m9.figshare.7244174.v1
title: Genetic diversity in oil palm (Elaeis guineensis Jacq) using RAM (Random Amplified Microsatellites)

description: ABSTRACT The oil palm (Elaeis guineensis Jacq) plays an important role in the economy of some tropical countries; Colombia ranks first for production in Latin America and fifth in the world. The aim of this research was to characterize the genetic variability of 51 oil palm genotypes from the Congo with seven randomly amplified microsatellite markers RAM. As a result, 241 alleles were generated andthe number of polymorphic loci ranged from 46 to 14 for the ACA and CGA primers, respectively. High genetic diversity was found, with a total heterozygosity of 0.64, along with a high percentage of polymorphic loci, 89%. The coefficient of genetic differentiation (Fst) was 0.15, indicating that there was moderate genetic differentiation. The genetic diversity study differentiated the 51 genotypes into four groups with a similarity of 0.52. The RAM technique detected the genetic variability of the palm genotypes and showed a high degree of polymorphism and sensitivity for discrimination. These results provide information that can be used to develop conservation strategies for palm germplasm and breeding programs to obtain more productive palm genotypes with superior quality and tolerance to major diseases.
DOI: 10.7284/135112
title: Anemometer data collected during research cruise SKQ201913T using a Gill WindObserver 75 instrument system onboard the platform RV Sikuliaq

description: Processed data created by vessel technician during a Field_expedition
DOI: 10.6084/m9.figshare.7244168
title: Antioxidant and hepatoprotective effects of ethanolic and ethyl acetate stem bark extracts of Copaifera multijuga (Fabaceae) in mice

description: ABSTRACT The properties of oil-resin of copaiba, Copaifera multijuga are commonly mentioned in the literature, but there are few studies on extracts from its stem bark. We evaluated the antioxidant effects of ethanolic (EE) and ethyl acetate (EA) crude stem bark extracts from copaiba and compared them to rutin in a paracetamol (PCM)-induced oxidative stress model in mice. All test comparisons differed significantly. Hepatic catalase (CAT) and glutathione-S-transferase (GST) activity decreased in the PCM group, and there was an increase of protein carbonyls in the liver, kidney and brain. However, the protein carbonyls decreased in the liver for the PCM + EE group, in the kidneys for the PCM + EA and PCM + Rutin groups, and in the brain for all treatments. Hepatic GSH decreased in the PCM group and increased in the PCM + EE group. The extracts showed a positive effect on ascorbic acid (ASA), since they were able to restore the levels of parameters that had been changed by PCM. There was an increase of ALT and AST activity in the plasma within the PCM group. Even though ALT decreased in the PCM + Rutin, PCM + EE and PCM + EA groups, EE and EA did not have an effect on AST. The strongest antioxidant effect was observed for EE, due to the presence of the phenolic compounds epicatechin and epiafzelechin, as well as the highest concentration of total phenols and an excellent antioxidant potential observed in the DPPH· test.
DOI: 10.7284/135099
title: Expendable Probe data collected during research cruise SKQ201913T using a Sippican MK21 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7244162
title: The combining ability of popcorn S7 lines for Puccinia polysora resistance purposes

description: ABSTRACT The present study resulted from the lack of information on the genotypic expression ruling the resistance to rust and on the main traits of economic importance to the herein addressed crop. The combining ability of 16 popcorn lines and hybrids was assessed in partial diallel cross in two representative locations in Rio de Janeiro State, Brazil, where forty simple hybrids were obtained. The experiments followed a completely randomized block design with four repetitions and were conducted under natural infestation conditions in order to test the southern rust severity in the entire plant (SSW) and in the leaf of the first ear (SFPE), as well as the morpho-agronomic traits of greater interest: grain yield (GY) and popping expansion (PE). Additive gene effects prevailed in PE and the non-additive ones stood out in GY; however, both gene effects were important to the southern rust resistance characteristics (SSW and SFPE). Hybrids L65 × P10 and P7 × L70 presented appropriate specific combining ability (SCA) values in all traits; therefore, they were promising for the selection of superior genotypes. Lines L80, L76 and L77 expressed negative general combining ability (GCA) values in SSW and SFPE; line P10 recorded high and positiveGCA values in GY and PE.
DOI: 10.6084/m9.figshare.7244165
title: Nitrogen recovery efficiency for corn intercropped with palisade grass

description: ABSTRACT Intercropping corn and palisade grass is a technique to increase straw production, soil C contents, nutrient cycling and crop yield. However, concerns arise from nitrogen (N) uptake by the intercropping crop causing reduction in the yield of the corn. Our objective was to evaluate N recovery efficiency (NRE), and the N dynamics in the soil-plant system in corn intercropped with palisade grass. A field trial was carried out in Bahia, Brazil, evaluating two cropping systems: corn (monoculture) and corn intercropped with palisade grass sowed between rows on the same day as the corn crop, with four replicates in a completely randomized block design. Nitrogen (150 kg∙ha–1of 15N-urea) was applied at sowing to determine NRE, which means the amounts of N-fertilizer uptake in corn and palisade grass, the amounts of N-fertilizer in soil and the 15N-fertilizer balance. Neither the NRE (63.3% in monoculture and 57.2% in intercropping) nor corn grain yield (9,800 kg∙ha–1 in monoculture and 9,671 kg∙ha–1 in intercropping) was affected by intercropping, which accumulated only 2.1 kg∙ha–1 of N-fertilizer or 1.4% N rate. In addition, palisade grass yielded 2,265 kg∙ha–1 of dry matter. The balance indicated that 82.4% of N-fertilizer was recovered in the monoculture and 86.9% in the intercropping. Intercropping palisade grass does not affect grain yield or N corn nutrition and has the potential to increase straw production contributing to maintenance of no-till.
DOI: 10.6084/m9.figshare.7244168.v1
title: Antioxidant and hepatoprotective effects of ethanolic and ethyl acetate stem bark extracts of Copaifera multijuga (Fabaceae) in mice

description: ABSTRACT The properties of oil-resin of copaiba, Copaifera multijuga are commonly mentioned in the literature, but there are few studies on extracts from its stem bark. We evaluated the antioxidant effects of ethanolic (EE) and ethyl acetate (EA) crude stem bark extracts from copaiba and compared them to rutin in a paracetamol (PCM)-induced oxidative stress model in mice. All test comparisons differed significantly. Hepatic catalase (CAT) and glutathione-S-transferase (GST) activity decreased in the PCM group, and there was an increase of protein carbonyls in the liver, kidney and brain. However, the protein carbonyls decreased in the liver for the PCM + EE group, in the kidneys for the PCM + EA and PCM + Rutin groups, and in the brain for all treatments. Hepatic GSH decreased in the PCM group and increased in the PCM + EE group. The extracts showed a positive effect on ascorbic acid (ASA), since they were able to restore the levels of parameters that had been changed by PCM. There was an increase of ALT and AST activity in the plasma within the PCM group. Even though ALT decreased in the PCM + Rutin, PCM + EE and PCM + EA groups, EE and EA did not have an effect on AST. The strongest antioxidant effect was observed for EE, due to the presence of the phenolic compounds epicatechin and epiafzelechin, as well as the highest concentration of total phenols and an excellent antioxidant potential observed in the DPPH· test.
DOI: 10.6084/m9.figshare.7244165.v1
title: Nitrogen recovery efficiency for corn intercropped with palisade grass

description: ABSTRACT Intercropping corn and palisade grass is a technique to increase straw production, soil C contents, nutrient cycling and crop yield. However, concerns arise from nitrogen (N) uptake by the intercropping crop causing reduction in the yield of the corn. Our objective was to evaluate N recovery efficiency (NRE), and the N dynamics in the soil-plant system in corn intercropped with palisade grass. A field trial was carried out in Bahia, Brazil, evaluating two cropping systems: corn (monoculture) and corn intercropped with palisade grass sowed between rows on the same day as the corn crop, with four replicates in a completely randomized block design. Nitrogen (150 kg∙ha–1of 15N-urea) was applied at sowing to determine NRE, which means the amounts of N-fertilizer uptake in corn and palisade grass, the amounts of N-fertilizer in soil and the 15N-fertilizer balance. Neither the NRE (63.3% in monoculture and 57.2% in intercropping) nor corn grain yield (9,800 kg∙ha–1 in monoculture and 9,671 kg∙ha–1 in intercropping) was affected by intercropping, which accumulated only 2.1 kg∙ha–1 of N-fertilizer or 1.4% N rate. In addition, palisade grass yielded 2,265 kg∙ha–1 of dry matter. The balance indicated that 82.4% of N-fertilizer was recovered in the monoculture and 86.9% in the intercropping. Intercropping palisade grass does not affect grain yield or N corn nutrition and has the potential to increase straw production contributing to maintenance of no-till.
DOI: 10.6084/m9.figshare.7244159
title: Adaptation and validation of the Measuring of Treatment Adherence for mental health

description: ABSTRACT Objective: to adapt culturally and validate the Measuring Instrument of Treatment Adherence for mental health. Method: methodological study, carried out with 300 individuals with mental disorders, in two Psychosocial Care Centers in Curitiba, state of Paraná, Brazil, from April to June 2014. The cross-cultural adaptation was developed according to international recommendations, the construct validation was made by exploratory factor analysis, and internal consistency was verified by Cronbach’s alpha. Results: through the evaluation of a committee of experts and completion of the pre-testing, face and content validation was achieved. From the factor analysis, we identified two factors of the instrument’s construct: involuntary action and voluntary action, with a total explanation variance of 55.7%. The value of Bartlett’s test of sphericity was p&lt;0.001. Cronbach’s alpha was 0.74. Conclusion: the adapted and validated instrument proved to be trustworthy to be applied to the verification of adherence to drug therapy for individuals with mental disorders.
DOI: 10.6084/m9.figshare.7244162.v1
title: The combining ability of popcorn S7 lines for Puccinia polysora resistance purposes

description: ABSTRACT The present study resulted from the lack of information on the genotypic expression ruling the resistance to rust and on the main traits of economic importance to the herein addressed crop. The combining ability of 16 popcorn lines and hybrids was assessed in partial diallel cross in two representative locations in Rio de Janeiro State, Brazil, where forty simple hybrids were obtained. The experiments followed a completely randomized block design with four repetitions and were conducted under natural infestation conditions in order to test the southern rust severity in the entire plant (SSW) and in the leaf of the first ear (SFPE), as well as the morpho-agronomic traits of greater interest: grain yield (GY) and popping expansion (PE). Additive gene effects prevailed in PE and the non-additive ones stood out in GY; however, both gene effects were important to the southern rust resistance characteristics (SSW and SFPE). Hybrids L65 × P10 and P7 × L70 presented appropriate specific combining ability (SCA) values in all traits; therefore, they were promising for the selection of superior genotypes. Lines L80, L76 and L77 expressed negative general combining ability (GCA) values in SSW and SFPE; line P10 recorded high and positiveGCA values in GY and PE.
DOI: 10.7284/135101
title: Flowmeter data collected during research cruise SKQ201913T using a Krohne Optiflux 5000 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7244156
title: Mapping Soil Cation Exchange Capacity in a Semiarid Region through Predictive Models and Covariates from Remote Sensing Data

description: ABSTRACT: Planning sustainable use of land resources requires reliable information about spatial distribution of soil physical and chemical properties related to environmental processes and ecosystemic functions. In this context, cation exchange capacity (CEC) is a fundamental soil quality indicator; however, it takes money and time to obtain this data. Although many studies have been conducted to spatially quantify soil properties on various scales and in different environments, not much is known about interactions between soil properties and environmental covariates in the Brazilian semiarid region. The goal of this study was to evaluate the efficiency of random forest and cokriging models applied to predict CEC in the Brazilian semiarid region. The covariates used to predict CEC consist of images from Landsat 5 TM and a legacy soil map (scale 1:10,000). The sample set comprises 499 samples from the topsoil layer (0.00-0.20 m), where 375 samples were used in training processes and 124 as validation samples. The cokriging model (R2 = 0.57 and RMSE = 7.22 cmolc kg-1) performed better in predicting CEC than the random forest model (R2 = 0.47 and RMSE = 7.89 cmolc kg-1). The approach used showed potential for estimating CEC content in the Brazilian semiarid region by using covariates obtained from orbital remote sensing and the legacy soil map.
DOI: 10.6084/m9.figshare.7244159.v1
title: Adaptation and validation of the Measuring of Treatment Adherence for mental health

description: ABSTRACT Objective: to adapt culturally and validate the Measuring Instrument of Treatment Adherence for mental health. Method: methodological study, carried out with 300 individuals with mental disorders, in two Psychosocial Care Centers in Curitiba, state of Paraná, Brazil, from April to June 2014. The cross-cultural adaptation was developed according to international recommendations, the construct validation was made by exploratory factor analysis, and internal consistency was verified by Cronbach’s alpha. Results: through the evaluation of a committee of experts and completion of the pre-testing, face and content validation was achieved. From the factor analysis, we identified two factors of the instrument’s construct: involuntary action and voluntary action, with a total explanation variance of 55.7%. The value of Bartlett’s test of sphericity was p&lt;0.001. Cronbach’s alpha was 0.74. Conclusion: the adapted and validated instrument proved to be trustworthy to be applied to the verification of adherence to drug therapy for individuals with mental disorders.
DOI: 10.6084/m9.figshare.7244153
title: Development, Optimization and Validation of a GC Method by Polarity Phase Constants and Statistical Design of Experiments for the Determination of Monoterpenes in Alpinia zerumbet Essential Oil

description: In this report, a rapid and selective analytical method for the determination of monoterpenes in Alpinia zerumbet essential oil (AZEO) by gas chromatography (GC) flame ionization detection (FID) was developed, optimized and validated. The suitability of six different capillary columns was investigated by polarity phase constants calculated based on the methodology proposed by Rohrschneider and McReynolds. The most suitable column was then used in a central composite design applying the following GC factors to investigate responses based on peak resolutions and analysis time: initial oven temperature, heating rate and carrier gas flow rate. The optimized method has initial oven temperature of 60 ºC, heating rate of 5.1 ºC min-1 and flow rate of 1.0 mL min-1 using the DB-35 capillary column. The validation acceptance criteria were met in all cases. The method was successfully applied for the quantification of major monoterpenes found in AZEO in different samples of Alpinia zerumbet.
DOI: 10.6084/m9.figshare.7244153.v1
title: Development, Optimization and Validation of a GC Method by Polarity Phase Constants and Statistical Design of Experiments for the Determination of Monoterpenes in Alpinia zerumbet Essential Oil

description: In this report, a rapid and selective analytical method for the determination of monoterpenes in Alpinia zerumbet essential oil (AZEO) by gas chromatography (GC) flame ionization detection (FID) was developed, optimized and validated. The suitability of six different capillary columns was investigated by polarity phase constants calculated based on the methodology proposed by Rohrschneider and McReynolds. The most suitable column was then used in a central composite design applying the following GC factors to investigate responses based on peak resolutions and analysis time: initial oven temperature, heating rate and carrier gas flow rate. The optimized method has initial oven temperature of 60 ºC, heating rate of 5.1 ºC min-1 and flow rate of 1.0 mL min-1 using the DB-35 capillary column. The validation acceptance criteria were met in all cases. The method was successfully applied for the quantification of major monoterpenes found in AZEO in different samples of Alpinia zerumbet.
DOI: 10.7284/135102
title: Fluorometer data collected during research cruise SKQ201913T using a Turner Cyclops-7 instrument system onboard the platform RV Sikuliaq

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7244150
title: Genetic parameters for milk traits, somatic cell, and total bacteria count scores in Brazilian Jersey herds

description: ABSTRACT This study aimed to estimate the heritability of milk yield (MY), fat percent (F%), fat yield (FY), protein percent (P%), protein yield (PY), somatic cell score (SCS), and total bacterial count score (TBCS) as well as to estimate the genetic correlations among these traits, using a dataset from 5,918 lactations of Jersey cows in Brazil. The covariance components were estimated by restricted maximum likelihood using the PEST and VCE6 programs. The average values obtained for MY, F%, FY, P%, PY, SCS, and TBCS were 5017.5 kg, 4.3%, 192.3 kg, 3.3%, 173.0 kg, 5.9, and 2.9, respectively, while the heritability values were 0.16, 0.55, 0.18, 0.61, 0.25, 0.21, and 0.08, respectively. The genetic correlations ranged from low to high magnitude, with positive values from 0.06 (TBCS-PY) to 0.72 (FY-PY), and negative values from −0.04 (F%-TBCS) to −0.44 (P%-TBCS). The Jersey breed from Brazil shows genetic variability for all traits analyzed in the present study, and our results suggest that higher genetic gain will be achieved when F% and P% are used as selection criteria. In addition, it is important to use SCS as a selection criterion since the selection for MY and PY may lead to higher SCS or TBCS values, which are undesirable. This was the first study to estimate genetic parameters for milk quality (PY, P%, FY, F%) and udder health (SCS, TBCS) traits in Jersey cows from Brazil. This information is useful for breeding schemes and contributes to better characterize these parameters in tropical region, since few studies were developed with the Jersey cattle in this environment.
DOI: 10.6084/m9.figshare.7244156.v1
title: Mapping Soil Cation Exchange Capacity in a Semiarid Region through Predictive Models and Covariates from Remote Sensing Data

description: ABSTRACT: Planning sustainable use of land resources requires reliable information about spatial distribution of soil physical and chemical properties related to environmental processes and ecosystemic functions. In this context, cation exchange capacity (CEC) is a fundamental soil quality indicator; however, it takes money and time to obtain this data. Although many studies have been conducted to spatially quantify soil properties on various scales and in different environments, not much is known about interactions between soil properties and environmental covariates in the Brazilian semiarid region. The goal of this study was to evaluate the efficiency of random forest and cokriging models applied to predict CEC in the Brazilian semiarid region. The covariates used to predict CEC consist of images from Landsat 5 TM and a legacy soil map (scale 1:10,000). The sample set comprises 499 samples from the topsoil layer (0.00-0.20 m), where 375 samples were used in training processes and 124 as validation samples. The cokriging model (R2 = 0.57 and RMSE = 7.22 cmolc kg-1) performed better in predicting CEC than the random forest model (R2 = 0.47 and RMSE = 7.89 cmolc kg-1). The approach used showed potential for estimating CEC content in the Brazilian semiarid region by using covariates obtained from orbital remote sensing and the legacy soil map.