cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14375467
title: Neoantigen-4-PepQuery2-Verification

description: Verification is an essential step in the process of analyzing neoantigens to ensure that the identified peptides or proteins are accurate and reliable. Neoantigens, which are novel antigens arising from tumor-specific mutations, are crucial for cancer immunotherapy. However, the prediction and identification of these neoantigens must be rigorously validated to ensure they are truly present and capable of eliciting an immune response. Without proper verification, the therapeutic potential of neoantigens cannot be realized, leading to wasted resources and failed treatments.

In this tutorial, we will guide you through a series of bioinformatics tools used to verify novel peptides and proteins predicted from mass spectrometry data. These tools help confirm the presence and specificity of the identified neoantigens by comparing them to protein databases, checking for validation against spectral data, and performing sequence analysis.
DOI: 10.15468/dl.r588z8
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-7.071 42.288,-6.166 42.288,-6.166 42.939,-7.071 42.939,-7.071 42.288))",
 "OccurrenceStatus is Present",
 "TaxonKey is Pilosella pseudopilosella (Ten.) Soják"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002345-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rh8kc4
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((7.81823 45.00284,7.81341 44.99374,7.81145 44.98644,7.81017 44.98154,7.81439 44.98162,7.81687 44.98734,7.81793 44.98952,7.82237 44.99058,7.82598 44.99246,7.82793 44.99411,7.82869 44.99645,7.82974 44.99848,7.82982 45.00043,7.82974 45.00254,7.81823 45.00284))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 55 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002346-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10866372
title: RESICE - Reusability-targeted Enriched Sea Ice Core Database - Part B

description: This is Part B of RESICE. RESICE_PartB.csv contains all data including profile data (several rows per core), RESICE_PartB_cores.csv provides all data excuding profile data (one row per core) and sources_PartB.csv provides a list of all sources. The database including its Part A is described in the general information. Part A and Part B had to be separated due to different licenses of the orginal data sources.
DOI: 10.5281/zenodo.14744942
title: RESICE - Reusability-targeted Enriched Sea Ice Core Database - Part B

description: This is Part B of RESICE. RESICE_PartB.csv contains all data including profile data (several rows per core), RESICE_PartB_cores.csv provides all data excuding profile data (one row per core) and sources_PartB.csv provides a list of all sources. The database including its Part A is described in the general information. Part A and Part B had to be separated due to different licenses of the orginal data sources.
DOI: 10.5281/zenodo.15056643
title: RESICE - Reusability-targeted Enriched Sea Ice Core Database - Part B

description:  
RESICE is described in detail in the article Reusability-targeted enrichment of sea ice core data published on 2025-03-20 in Scientific Data (DOI: 10.1038/s41597-025-04665-x). This is Part B of RESICE. RESICE_PartB.csv contains all data including profile data (several rows per core), RESICE_PartB_cores.csv provides all data excuding profile data (one row per core) and sources_PartB.csv provides a list of all sources. The database including its Part A is described in the general information. Part A and Part B had to be separated due to different licenses of the orginal data sources.
DOI: 10.15468/dl.jvj6bm
title: Occurrence Download

description: A dataset containing 71284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Country is Netherlands",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Prunus serotina Ehrh.",
 "Year 1859-2025"
 ]
}

 The dataset includes 71284 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002339-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28638788
title: Parallel pheasant trackways in mud. also included are photos + model of the same tracks 5 days later after drying, submersion, and drying again.

description: Two parallel trackways left by Pheasants in deep soft mud.
DOI: 10.15468/dl.b6b5a3
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Hypselotriton Wolterstorff, 1934"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002348-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jvcr3v
title: Occurrence Download

description: A dataset listing the 5 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Didelphis virginiana Kerr, 1792"
 ]
}

 The dataset's 5 records were derived from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002341-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bd5tae
title: Occurrence Download

description: A dataset containing 125824 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "Geometry POLYGON((9.5 44.2, 12.1 44.2, 12.1 45.7, 9.5 45.7, 9.5 44.2))",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than 100",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 125824 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002338-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jpxc8b
title: Occurrence Download

description: A dataset containing 36515 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Taxon occurrence data for the FungalRoot database"
 ]
}

 The dataset includes 36515 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002347-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28624955.v6
title: <i>Curso </i><i>Genetica de Conservacion</i>

description: Datasets and presentations for the "<i>Curso</i><i> </i><i>Genetica</i><i> de </i><i>Conservacion"</i>
DOI: 10.15468/dl.pfy78n
title: Occurrence Download

description: A dataset containing 2545 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((6.55337 47.94973,6.60239 47.94375,6.62132 47.95551,6.62311 47.97683,6.61036 47.98739,6.59282 47.9828,6.57151 47.9832,6.5466 47.97165,6.53783 47.96128,6.53983 47.95053,6.55337 47.94973))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2545 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002349-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xeq9yk
title: Occurrence Download

description: A dataset containing 18455 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ambystoma opacum (Gravenhorst, 1807)"
 ]
}

 The dataset includes 18455 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002352-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6bshvf
title: Occurrence Download

description: A dataset containing 468 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((7.59647 44.8364,7.60263 44.80399,7.63839 44.80012,7.656 44.81897,7.63645 44.84732,7.61972 44.84503,7.59647 44.8364))"
 ]
}

 The dataset includes 468 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002353-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.amyah6
title: Occurrence Download

description: A dataset containing 8813 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Milvus migrans (Boddaert, 1783)"
 ]
}

 The dataset includes 8813 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002355-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15090531
title: Seed structure and phosphorylation in the fuzzy coat impact tau seeding competency data

description: Tabular data for the figures in the paper and the supplement.
description: Tau is a pathogenic protein in Alzheimer’s (AD) and other neurodegenerative diseases. The misfolding of tau into β-sheet rich elongated filaments is thought to be a key event in disease pathogenesis, followed by subsequent templated recruitment of monomeric tau into this pathogenic form. Cryo-electron microscopy has revealed that specific tau conformations characterize different diseases. In this study, we explored how tau filament core structure and post-translational modifications in its disordered fuzzy coat influence its seeding capacity in primary neurons and mice. We show that the structure of the seeds affects seeding capacity, but that the AD tau core structure alone is insufficient to capture the full seeding capacity of AD tau. Proteolytic cleavage of AD tau which removes the fuzzy coat causes a loss in seeding capacity, as does removal of phosphorylation from the fuzzy coat by phosphatase treatment. Re-phosphorylation of phosphatase-treated AD tau by kinase treatment partially restores seeding activity. Finally, we find that filaments of recombinant tau with twelve phospho-mimetic residues (PAD12 tau) with the AD fold are able to recapitulate the seeding capacity of AD tau. Combined, these results suggest that the structure of the ordered core, together with phosphorylation in the fuzzy coat, confers the seeding capacity of tau filaments.
DOI: 10.15468/dl.7cybdq
title: Occurrence Download

description: A dataset containing 1283 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((7.52163 44.77478,7.64981 44.77478,7.64981 44.87027,7.52163 44.87027,7.52163 44.77478))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1283 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002358-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11079340
title: An Exploratory Comparison of Attitudes Toward Stuttering and Cluttering of Chinese Practicing Speech and Language Therapists (SLTs) and SLT Students
DOI: 10.5281/zenodo.11079341
title: attitudes toward stuttering and cluttering among Chinese with speech therapy backgrounds
DOI: 10.5281/zenodo.14207805
title: attitudes toward stuttering and cluttering among Chinese with speech therapy backgrounds
DOI: 10.5281/zenodo.14207825
title: An Exploratory Comparison of Attitudes Toward Stuttering and Cluttering of Chinese Practicing Speech and Language Therapists (SLTs) and SLT Students
DOI: 10.15468/dl.wzaces
title: Occurrence Download

description: A dataset containing 876 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((7.67371 45.01788,7.67014 45.01311,7.67372 45.00529,7.67652 45.00501,7.67829 45.00175,7.68386 45.00536,7.68333 45.00834,7.6793 45.01294,7.67371 45.01788))"
 ]
}

 The dataset includes 876 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002356-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14810848
title: Single-molecule analysis reveals the mechanism of chromatin ubiquitylation by variant PRC1 complexes

description: Plasmid maps and raw gels for the 'Single-molecule analysis reveals the mechanism of chromatin ubiquitylation by variant PRC1 complexes'.

Single-molecule TIRF datasets are uploaded in the related DOIs.
DOI: 10.5281/zenodo.15090412
title: Dataset TILs Melanoma Processed
DOI: 10.5281/zenodo.15090413
title: Dataset TILs Melanoma Processed
DOI: 10.5281/zenodo.15090471
title: Dataset TILs Melanoma Processed
DOI: 10.5281/zenodo.10866364
title: RESICE - Reusability-targeted Enriched Sea Ice Core Database - Part A

description: This is Part A of RESICE. RESICE_PartA.csv contains all data including profile data (several rows per core), RESICE_PartA_cores.csv provides all data excuding profile data (one row per core) and sources_PartA.csv provides a list of all sources. The database including its Part B is described in the general information. Part A and Part B had to be separated due to different licenses of the orginal data sources.
DOI: 10.5281/zenodo.14745035
title: RESICE - Reusability-targeted Enriched Sea Ice Core Database - Part A

description: This is Part A of RESICE. RESICE_PartA.csv contains all data including profile data (several rows per core), RESICE_PartA_cores.csv provides all data excuding profile data (one row per core) and sources_PartA.csv provides a list of all sources. The database including its Part B is described in the general information. Part A and Part B had to be separated due to different licenses of the orginal data sources.
DOI: 10.5281/zenodo.15056612
title: RESICE - Reusability-targeted Enriched Sea Ice Core Database - Part A

description: RESICE is described in detail in the article Reusability-targeted enrichment of sea ice core data published on 2025-03-20 in Scientific Data (DOI: 10.1038/s41597-025-04665-x). This is Part A of RESICE. RESICE_PartA.csv contains all data including profile data (several rows per core), RESICE_PartA_cores.csv provides all data excuding profile data (one row per core) and sources_PartA.csv provides a list of all sources. The database including its Part B is described in the general information. Part A and Part B had to be separated due to different licenses of the orginal data sources.
DOI: 10.6084/m9.figshare.28669523
title: Data from: Variation in albumin glycation rates in birds suggests resistance to relative hyperglycaemia rather than conformity to the pace of life syndrome hypothesis

description: Dataset from: Variation in albumin glycation rates in birds suggests resistance to relative hyperglycaemia rather than conformity to the pace of life syndrome hypothesisAbstractThe pace of life syndrome hypothesis (POLS) suggests that organisms’ life history, physiological and behavioural traits should co-evolve. In this framework, how glycaemia (i.e., blood glucose levels) and its reaction with proteins and other compounds (i.e. glycation) covary with life history traits remain relatively under-investigated, despite the well documented consequences of glucose and glycation on ageing, and therefore potentially on life history evolution. Birds are particularly relevant in this context given that they have the highest blood glucose levels within vertebrates and still higher mass-adjusted longevity when compared to organisms with similar physiology as mammals. We thus performed a comparative analysis on glucose and albumin glycation rates of 88 bird species from 22 orders, in relation to life history traits (body mass, clutch mass, maximum lifespan and developmental time) and diet. Glucose levels correlated positively with albumin glycation rates in a non-linear fashion, suggesting resistance to glycation in species with higher glucose levels. Plasma glucose levels decreased with increasing body mass but, contrary to what is predicted to the POLS hypothesis, glucose levels increased with maximum lifespan before reaching a plateau. Finally, terrestrial carnivores showed higher albumin glycation compared to omnivores despite not showing higher glucose, which we discuss may be related to additional factors as differential antioxidant levels or dietary composition in terms of fibres or polyunsaturated fatty acids. These results increase our knowledge about the diversity of glycaemia and glycation patterns across birds, pointing towards the existence of glycation resistance mechanisms within comparatively high glycaemic birds.
DOI: 10.5281/zenodo.14144044
title: CoUDlabs_TA_USFD_01_A/B_Flume_Mignot. Experimental characterisation of soluble contaminant transport from surcharging sewer infrastructure within shallow urban floods - Datasets

description: This dataset contains the results of the experimental campaign and how data were collected on the the Co-UDlabs Transnational Access project: Pollutant Transport in Urban Floodwaters (CoUDlabs_TA_USFD_01_A/B_Flume_Mignot). The Transnational Access project was funded under the European Union’s Horizon 2020 research and innovation programme under grant agreement No 101008626.

Particularly, the aim of these experiments concerns the experimental characterisation of soluble contaminant transport from surcharging sewer infrastructure within shallow urban floods. See readme file for more information.
DOI: 10.15468/dl.n82nu8
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hypselotriton orphicus (Risch, 1983)"
 ]
}

 The dataset includes 12 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002360-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25420/britishmuseum.28660091.v1
title: ELAN Annotation Interlinear extension

description: File for ELAN Annotation of the production process of Urhobo rope and broom
DOI: 10.25420/britishmuseum.28660097
title: ELAN Annotation extension IV

description: File for ELAN Annotation of the production process of Urhobo rope and broom
DOI: 10.25420/britishmuseum.28660097.v1
title: ELAN Annotation extension IV

description: File for ELAN Annotation of the production process of Urhobo rope and broom
DOI: 10.25420/britishmuseum.28660136.v1
title: Wordlist of endangered registers of Urhobo rope and broom

description: Wordlist of endangered registers associated with the rope and broom craft
DOI: 10.25420/britishmuseum.28660085
title: ELAN Annotation extension II

description: File for ELAN Annotation of the production process of Urhobo rope and broom
DOI: 10.25420/britishmuseum.28660088
title: ELAN Annotation extension II

description: File for ELAN Annotation of the production process of Urhobo rope and broom
DOI: 10.25420/britishmuseum.28660136
title: Wordlist of endangered registers of Urhobo rope and broom

description: Wordlist of endangered registers associated with the rope and broom craft
DOI: 10.25420/britishmuseum.28660079.v1
title: Transcription and translation of video clip 2019SG01-D01-0006

description: Transcription and translation of video clip 2019SG01-D01-0006
DOI: 10.25420/britishmuseum.28660091
title: ELAN Annotation Interlinear extension

description: File for ELAN Annotation of the production process of Urhobo rope and broom
DOI: 10.25420/britishmuseum.28660073
title: Transcription and translation of video clip 2019SG01-D01-0005

description: Transcription and translation of video clip 2019SG01-D01-0005
DOI: 10.25420/britishmuseum.28660073.v1
title: Transcription and translation of video clip 2019SG01-D01-0005

description: Transcription and translation of video clip 2019SG01-D01-0005
DOI: 10.25420/britishmuseum.28660085.v1
title: ELAN Annotation extension II

description: File for ELAN Annotation of the production process of Urhobo rope and broom
DOI: 10.25420/britishmuseum.28660067
title: Transcription and translation of video clip 2019SG01-D01-0003

description: Transcription and translation of video clip 2019SG01-D01-0003
DOI: 10.25420/britishmuseum.28660067.v1
title: Transcription and translation of video clip 2019SG01-D01-0003

description: Transcription and translation of video clip 2019SG01-D01-0003
DOI: 10.25420/britishmuseum.28660070
title: Transcription and translation of video clip 2019SG01-D01-0004

description: Transcription and translation of video clip 2019SG01-D01-0004
DOI: 10.25420/britishmuseum.28660079
title: Transcription and translation of video clip 2019SG01-D01-0006

description: Transcription and translation of video clip 2019SG01-D01-0006
DOI: 10.25420/britishmuseum.28660082.v1
title: Transcription and translation of video clip 2019SG01-D01-0007

description: Transcription and translation of video clip 2019SG01-D01-0007
DOI: 10.25420/britishmuseum.28660064
title: Transcription and translation of video clip 2019SG01-D01-0002

description: Transcription and translation of video clip 2019SG01-D01-0002
DOI: 10.25420/britishmuseum.28660070.v1
title: Transcription and translation of video clip 2019SG01-D01-0004

description: Transcription and translation of video clip 2019SG01-D01-0004
DOI: 10.25420/britishmuseum.28660082
title: Transcription and translation of video clip 2019SG01-D01-0007

description: Transcription and translation of video clip 2019SG01-D01-0007
DOI: 10.25420/britishmuseum.28660055
title: 2019SG01 Guide to the Data

description: Explanation of all data arising from the project
DOI: 10.25420/britishmuseum.28660055.v1
title: 2019SG01 Guide to the Data

description: Explanation of all data arising from the project
DOI: 10.25420/britishmuseum.28660061
title: Transcription and translation of video clip 2019SG01-D01-0001

description: Transcription and translation of video clip 2019SG01-D01-0001
DOI: 10.25420/britishmuseum.28660061.v1
title: Transcription and translation of video clip 2019SG01-D01-0001

description: Transcription and translation of video clip 2019SG01-D01-0001
DOI: 10.25420/britishmuseum.28660064.v1
title: Transcription and translation of video clip 2019SG01-D01-0002

description: Transcription and translation of video clip 2019SG01-D01-0002
DOI: 10.25420/britishmuseum.28659944
title: Consent of craftswomen

description: Audio recording of consent of group of rope and broom makers
DOI: 10.25420/britishmuseum.28659944.v1
title: Consent of craftswomen

description: Audio recording of consent of group of rope and broom makers
DOI: 10.25420/britishmuseum.28659935
title: Consent of Mr Oghenetega Oke Kregidi

description: Signed consent form of Oghenetega Oke Kregidi
DOI: 10.25420/britishmuseum.28659935.v1
title: Consent of Mr Oghenetega Oke Kregidi

description: Signed consent form of Oghenetega Oke Kregidi
DOI: 10.25420/britishmuseum.28659938
title: Consent of Mr Augustine Omohwo

description: Signed consent form of Augustine Omohwo