cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.vhbrdh
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spathodea campanulata Beauverd",
 "Country is Jamaica",
 "HasCoordinate is true"
 ]
}

 The dataset includes 41 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111260-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/aka-vnm-5ay
title: Polygonum arenarium Waldst. & Kit.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/hzs-281-afz
title: Polycarpon tetraphyllum (L.) L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/rrb-qak-zx0
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/tb4-mt8-k3k
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/5tx-1c9-4b4
title: Polygonum arenarium Waldst. & Kit.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/7rn-01s-d3p
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/hsc-3gj-zjn
title: Polygonum arenarium Waldst. & Kit.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/7a5-5s1-ldq
title: Polygonum arenarium Waldst. & Kit.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/95p-kxx-gwr
title: Polygonum arenarium Waldst. & Kit.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/bff-gpr-j1h
title: Polygonum arenarium Waldst. & Kit.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/rlv-68k-saz
title: Polygonum arenarium Waldst. & Kit.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/1ca-x1t-6g9
title: Polygonum arenarium Waldst. & Kit.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/fzs-afj-09t
title: Polygonum arenarium Waldst. & Kit.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/ft4-372-9fn
title: Bistorta officinalis subsp. officinalis

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/k6v-4z7-a41
title: Polygonum aviculare L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/87k-pm6-p9m
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/rcc-q1q-41a
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/0nw-d5y-sdh
title: Polygonum aviculare L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/j8m-2hz-3lr
title: Polygonatum latifolium (Jacq.) Desf.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/tbd-fz6-qxs
title: Polygonum aviculare L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/jsx-29a-esg
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/zwv-r13-ln5
title: Polygonatum latifolium (Jacq.) Desf.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/ap9-3mm-eya
title: Polygonum aviculare L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/swd-729-sbn
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/asz-t1b-5qr
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/n8n-ffv-tf2
title: Polygonatum odoratum (Mill.) Druce

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/jw1-c8f-b29
title: Polygala comosa Schkuhr

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/wdg-szc-wh1
title: Polycarpon tetraphyllum (L.) L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/0th-eqh-e06
title: Polycarpon tetraphyllum (L.) L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/ggs-4pq-ad0
title: Scorzonera laciniata L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/qgw-zmp-30h
title: Polygonum aviculare subsp. neglectum (Besser) Arcang.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/ary-b6t-y64
title: Populus alba L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/xwt-kd4-41m
title: Polygala supina Schreb.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/90z-kzp-9pa
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/lpc-xbz-fqg
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/9tf-xk4-l5w
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/kzy-vrx-lcg
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.15468/dl.46ce34
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Myzomela rubratra (R.Lesson, 1827))",
 "Country is one of (Algeria, Angola, Benin, Botswana, British Indian Ocean Territory, Burkina Faso, Burundi, Cabo Verde, Cameroon, Central African Republic, Chad, Comoros, Congo, Congo, Democratic Republic of the, Côte d’Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Eswatini, Ethiopia, French Southern Territories, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Ascension and Tristan da Cunha, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, South Sudan, Sudan, Tanzania, United Republic of, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111262-250525065834625/datasets/export for details.
DOI: 10.3535/8lk-ev4-q7t
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/mc8-p7z-e3n
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/sfk-adb-bp8
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/c47-50p-rlf
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/g8k-zqk-d62
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.15468/dl.pxjgx4
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cordia prunifolia I.M.Johnst."
 ]
}

 The dataset includes 82 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111264-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/mkp-jec-00y
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/mzp-kl5-9ch
title: Polygala major Jacq.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/2dm-6kw-9k6
title: Polygala alpestris Rchb.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/tbk-007-8ab
title: Populus alba L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/dg5-jk4-x1a
title: Polygala nicaeensis subsp. mediterranea Chodat

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/h8s-wy7-kbm
title: Polygala alpestris Rchb.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/r6g-shh-mhc
title: Populus alba L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.5281/zenodo.15848606
title: HELIX01-04_Part_02 | Sequencing Runs from Motif-based DNA Data Storage Systems
title: Sequencing Runs from Motif-based DNA Data Storage Systems

description: Helixworks has developed a novel DNA data storage method that encodes digital information using composite motifs -short, predefined DNA sequences assembled in specific orders. Unlike base-by-base synthesis, this approach uses enzymatic ligation of DNA building blocks (called motifs), allowing for high-throughput, cost-efficient synthesis with built-in error tolerance.

Each oligo in the storage pool contains a structured arrangement of addressing barcodes, primers, and payload motifs, enabling robust multiplexing and retrieval. Information is read out via Oxford Nanopore sequencing and decoded by identifying the motifs present in each read. This architecture supports scalable, high-density molecular storage and can be integrated with automated workflows for synthesis and sequencing.

This dataset contains raw and processed outputs from a Helixworks composite motif-based DNA data storage experiment. Each archive includes:



Raw signal-level sequencing data (FAST5) – Generated via Oxford Nanopore sequencing (R10.4.1 / FLO-MIN114) of synthetic oligos assembled using Helixworks’ composite motif ligation protocol.

Design file (*_encoded.tsv) – Lists the intended motif sequence per oligo, including barcode and primer motifs, which define the structure and payload mapping.

Zero-error motif alignment file (*_master_db.txt) – Captures high-confidence motif alignments per read with no substitution, insertion, or deletion errors. Each row follows the format: [read_id] [filename] [barcode_id] [strand] [start] [end] [motif_id] [row_index] [column_index]




Used to validate motif calling accuracy and reconstruct encoded payloads from sequencing reads.

Note: The HELIX01-04 sequencing run has been split into two parts to comply with Zenodo’s file size limits. This archive contains Part 2 of the dataset.
DOI: 10.5281/zenodo.15848607
title: HELIX01-04_Part_02 | Sequencing Runs from Motif-based DNA Data Storage Systems
title: Sequencing Runs from Motif-based DNA Data Storage Systems

description: Helixworks has developed a novel DNA data storage method that encodes digital information using composite motifs -short, predefined DNA sequences assembled in specific orders. Unlike base-by-base synthesis, this approach uses enzymatic ligation of DNA building blocks (called motifs), allowing for high-throughput, cost-efficient synthesis with built-in error tolerance.

Each oligo in the storage pool contains a structured arrangement of addressing barcodes, primers, and payload motifs, enabling robust multiplexing and retrieval. Information is read out via Oxford Nanopore sequencing and decoded by identifying the motifs present in each read. This architecture supports scalable, high-density molecular storage and can be integrated with automated workflows for synthesis and sequencing.

This dataset contains raw and processed outputs from a Helixworks composite motif-based DNA data storage experiment. Each archive includes:



Raw signal-level sequencing data (FAST5) – Generated via Oxford Nanopore sequencing (R10.4.1 / FLO-MIN114) of synthetic oligos assembled using Helixworks’ composite motif ligation protocol.

Design file (*_encoded.tsv) – Lists the intended motif sequence per oligo, including barcode and primer motifs, which define the structure and payload mapping.

Zero-error motif alignment file (*_master_db.txt) – Captures high-confidence motif alignments per read with no substitution, insertion, or deletion errors. Each row follows the format: [read_id] [filename] [barcode_id] [strand] [start] [end] [motif_id] [row_index] [column_index]




Used to validate motif calling accuracy and reconstruct encoded payloads from sequencing reads.

Note: The HELIX01-04 sequencing run has been split into two parts to comply with Zenodo’s file size limits. This archive contains Part 2 of the dataset.
DOI: 10.3535/b43-sf4-hwa
title: Populus alba L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/hm5-f7j-9yd
title: Polygala alpestris Rchb.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/jaq-q5j-t9h
title: Populus alba L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/k0d-v68-570
title: Polygala vulgaris L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/8ch-9zw-0v4
title: Polygala alpestris Rchb.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.15156/bio/sh0164759.10fu
title: SH0164759.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0164760.10fu
title: SH0164760.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0164761.10fu
title: SH0164761.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0164762.10fu
title: SH0164762.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0164763.10fu
title: SH0164763.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.17063306
title: Novel hydrotalcite-zeolite composites as precursors for catalysis: Synthesis, transformation and structural stability

description: This repository contains all the measured data that correspond to the results of research into novel hydrotalcite-zeolite composites as precursors for catalysis. 

The work was supported by the OP JAK project "INOVO!!!", No. CZ.02.01.01/00/23_021/0008588 supported by the Ministry of Education, Youth and Sports and co-financed by the European Union. Experimental results were accomplished by using Large Research Infrastructure ENREGAT supported by the Ministry of Education, Youth and Sports of the Czech Republic under project No. LM2023056.
DOI: 10.15468/dl.tze6yc
title: Occurrence Download

description: A dataset containing 212 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((71.86814200000001 23.532364, 71.79155 23.526787, 71.71686200000001 23.510195, 71.64593499999999 23.483001, 71.580529 23.44588, 71.522262 23.399754, 71.472573 23.345767, 71.43268 23.285257, 71.403558 23.219722, 71.38591099999999 23.150781, 71.380155 23.080136, 71.386414 23.009527, 71.404516 22.940692, 71.433998 22.875321, 71.47412199999999 22.815018, 71.523892 22.76126, 71.58207899999999 22.715362, 71.64725300000001 22.678448, 71.71782 22.651417, 71.792053 22.634931, 71.86814200000001 22.62939, 71.944231 22.634931, 72.01846399999999 22.651417, 72.08903100000001 22.678448, 72.154205 22.715362, 72.21239199999999 22.76126, 72.262162 22.815018, 72.302286 22.875321, 72.331768 22.940692, 72.34987 23.009527, 72.356129 23.080136, 72.350373 23.150781, 72.33272599999999 23.219722, 72.30360400000001 23.285257, 72.263711 23.345767, 72.214022 23.399754, 72.155755 23.44588, 72.090349 23.483001, 72.01942200000001 23.510195, 71.944734 23.526787, 71.86814200000001 23.532364))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 212 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001181-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.