cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c5t14v28x
title: MassIVE MSV000098998 - Definitive benchmarking of DDA and DIA for host cell protein analysis on the Orbitrap Astral in a regulatory-aligned framework
title: Host cell proteins (HCPs) are critical quality attributes in biotherapeutics that require accurate, specific, and comprehensive quantification. Mass spectrometry (MS)-based workflows are increasingly adopted to overcome the coverage and specificity limitations of immunoassays. This study benchmarks the performance of the Orbitrap Astral mass spectrometer for label-free HCP analysis, comparing data-dependent acquisition (DDA, Top80) and data-independent acquisition (DIA, 4 m/z non-staggered windows) modes. We applied a statistically rigorous framework integrating a stable isotope-labeled HCP mixture for traceable quantification, entrapment-based empirical false discovery proportion estimation, deterministic protein inference, and stratified bootstrapping. Both acquisition modes demonstrated exceptional quantitative fidelity. DIA outperformed DDA in identifications, yielding 45% more proteins and 68% more peptides. Hierarchical Bayesian modeling revealed superior differential linearity in DIA (mean slope 1.0) compared to DDA (slope 0.8). Stratified bootstrap analysis confirmed linearity and accuracy across the dynamic range, with DIA achieving lower limits of quantification (0.6 ppm) versus DDA (1.6 ppm). While both workflows reliably quantified most high-risk HCPs, DIA provided expanded proteome coverage and enhanced fold-change precision. These findings validate the Orbitrap Astral as a high-fidelity platform for HCP analysis in both modes and establish a defensible, regulatory-aligned MS-based framework for routine use in quality control environments.
DOI: 10.15468/dl.8knnyu
title: Occurrence Download

description: A dataset containing 335 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mimulus layneae"
 ]
}

 The dataset includes 335 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016753-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nj2ae3
title: Occurrence Download

description: A dataset containing 349387 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2025-08-07",
 "EventDate is less than or equal to 2025-09-06",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 349387 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016729-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m28tgz
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hebenstretia glaucescens",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 41 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016754-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16986450
title: Temperature-Precipitation-FAPAR-and-human-footprint-data-sets-at-1km-for-Colombia

description: This dataset accompanies the publication titled "Human footprint amplifies the response of photosynthetic activity to precipitation across a diverse range of tropical ecosystems in Colombia".

This repository contains gridded 1 km datasets of temperature, precipitation, FAPAR, and human footprint values for Colombia between 1999 and 2019, provided as .tif files. Temperature, precipitation, and FAPAR are available as monthly values, while human footprint represents the mean between 2000 and 2015, based on Correa et al. (2020).
DOI: 10.5281/zenodo.16986451
title: Temperature-Precipitation-FAPAR-and-human-footprint-data-sets-at-1km-for-Colombia

description: This dataset accompanies the publication titled "Human footprint amplifies the response of photosynthetic activity to precipitation across a diverse range of tropical ecosystems in Colombia".

This repository contains gridded 1 km datasets of temperature, precipitation, FAPAR, and human footprint values for Colombia between 1999 and 2019, provided as .tif files. Temperature, precipitation, and FAPAR are available as monthly values, while human footprint represents the mean between 2000 and 2015, based on Correa et al. (2020).
DOI: 10.5281/zenodo.16932968
title: Energy consumption data at a transformer and a irrigation well in the North China Plain (from January to October 2018)

description: The data includes 1) chronological records of electrical parameters at one transformer that supplies electricity for several pumps, including three-phase voltage (unit: V), current (unit: A), real power (unit: W), apparent power total power (unit: W) and power factor;  and 2) chronological records of culmulative electricity consumption of a pump at an irrigation well (unit: 0.1 kW) covering the period from January to October 2018.
DOI: 10.5281/zenodo.16932969
title: Energy consumption data at a transformer and a irrigation well in the North China Plain (from January to October 2018)

description: The data includes 1) chronological records of electrical parameters at one transformer that supplies electricity for several pumps, including three-phase voltage (unit: V), current (unit: A), real power (unit: W), apparent power total power (unit: W) and power factor;  and 2) chronological records of culmulative electricity consumption of a pump at an irrigation well (unit: 0.1 kW) covering the period from January to October 2018.
DOI: 10.6084/m9.figshare.29868518.v22
title: Logic and being pdf v1-2-3-4-5-6 NEW

description: Logic and being
DOI: 10.15468/dl.gnyd35
title: Occurrence Download

description: A dataset containing 1778 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cotula bipinnata",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1778 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016755-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pxhft7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pangio lidi)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016756-250827131500795/datasets/export for details.
DOI: 10.5281/zenodo.17024423
title: Surface Electromyography (sEMG) Dataset for Pectoralis Muscle

description: The dataset consists of 29 sEMG signals recorded from the pectoralis muscle of 18 healthy adults with varied age, weight, and height, after obtaining informed consent, at the LINS Laboratory (USTHB).

The main objective is to identify two differente classes, rest  and muscle contraction.

Recordings were made using gel electrodes and a custom EMG acquisition board at a sampling rate of 1000 Hz, transmitted in real time to a computer via ESP32 and MATLAB, and stored in CSV format. Each session lasted 65 seconds and followed a structured protocol where participants alternated between the two classes every few seconds. Most participants contributed two sessions with a 3.7 V supply, 

Each CSV file contains four columns: 



Sample



Time 




FilteredV 


Label


The custom EMG acquisition board was designed to provide clean, high-quality signals through the following stages:





Instrumentation amplifier with a gain of 500.




Active band-pass filter (30–500 Hz) to suppress motion artifacts, DC offset, and high-frequency noise.




Notch filter at 50 Hz to remove power line interference.




Main amplification stage with a gain of 201.




Digital first-order IIR high-pass filter (cutoff 50 Hz)  to mitigate ECG contamination.



 

Dataset Summary








Type of Record
Number of Subjects
Number of Signals
Sampling Rate
Duration per Signal




EMG signals
18
29
1000 Hz
65 s






Note:



The dataset contains well-labeled signals with two classes: Class 0 = rest and Class 1 = contraction.

It is intended for use in the development of bionic control systems.

A large CSV file containing all signals concatenated has been added for convenience.

An additional CSV file without labels is included for testing purposes after training.


For more details, please feel free to contact us:



Kharziwisseme@hotmail.com

malikakedir@gmail.com

nac.meziane@gmail.com

bounabsarah2001@gmail.com
DOI: 10.5281/zenodo.17024424
title: Surface Electromyography (sEMG) Dataset for Pectoralis Muscle

description: The dataset consists of 29 sEMG signals recorded from the pectoralis muscle of 18 healthy adults with varied age, weight, and height, after obtaining informed consent, at the LINS Laboratory (USTHB).

The main objective is to identify two differente classes, rest  and muscle contraction.

Recordings were made using gel electrodes and a custom EMG acquisition board at a sampling rate of 1000 Hz, transmitted in real time to a computer via ESP32 and MATLAB, and stored in CSV format. Each session lasted 65 seconds and followed a structured protocol where participants alternated between the two classes every few seconds. Most participants contributed two sessions with a 3.7 V supply, 

Each CSV file contains four columns: 



Sample



Time 




FilteredV 


Label


The custom EMG acquisition board was designed to provide clean, high-quality signals through the following stages:





Instrumentation amplifier with a gain of 500.




Active band-pass filter (30–500 Hz) to suppress motion artifacts, DC offset, and high-frequency noise.




Notch filter at 50 Hz to remove power line interference.




Main amplification stage with a gain of 201.




Digital first-order IIR high-pass filter (cutoff 50 Hz)  to mitigate ECG contamination.



 

Dataset Summary








Type of Record
Number of Subjects
Number of Signals
Sampling Rate
Duration per Signal




EMG signals
18
29
1000 Hz
65 s






Note:



The dataset contains well-labeled signals with two classes: Class 0 = rest and Class 1 = contraction.

It is intended for use in the development of bionic control systems.

A large CSV file containing all signals concatenated has been added for convenience.

An additional CSV file without labels is included for testing purposes after training.


For more details, please feel free to contact us:



Kharziwisseme@hotmail.com

malikakedir@gmail.com

nac.meziane@gmail.com

bounabsarah2001@gmail.com
DOI: 10.15468/dl.vq25kz
title: Occurrence Download

description: A dataset containing 1812 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Minuartia douglasii"
 ]
}

 The dataset includes 1812 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016758-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15472/4lc2os
title: Colectas de plantas vasculares asociadas al proyecto Fortalecimiento de poblaciones de especies amenazadas del Caribe colombiano mediante acciones de propagación y siembra

description: La Fundación Jardín Botánico “Guillermo Piñeres” (JBGP) es especializada en la flora vascular de la región Caribe y su misión es la investigación y educación para la conservación de las especies del bosque seco tropical estacional. De esta manera, se presenta el conjunto de datos correspondientes a las colectas realizadas en marco del proyecto Flora del Caribe, de la línea de investigación de Biodiversidad del Caribe Colombiano, recolectadas mediante colectas libres. El JBGP tiene a la Subdirección Científica, como dependencia responsable de la administración de los programas de investigación científica.El proyecto Biodiversidad del Caribe Colombiano tiene como objetivo el desarrollo de investigaciones sobre el origen y mantenimiento de la biodiversidad en un contexto sistemático evolutivo. Con base en estudios florísticos y faunísticos y de ecología de plantas, animales y sus interacciones principalmente, pero no limitados a la región Neotropical, reconocer sistemas biológicos adecuados para el estudio de evolución de la biota. Formulación de hipótesis de patrones de parentesco de organismos a distintos niveles taxonómicos, enmarcados dentro de la Sistemática Filogenética. Elucidación de procesos evolutivos a partir de los patrones filogenéticos hipotetizados. Aporte de las distintas disciplinas de la biología (e.g. Sistemática, Paleontología, Ecología, Etología, Morfología, Embriología, Fisiología, Biología molecular, Genética, etc.) al estudio de la historia y las causas de la evolución. Aplicación de estudios sistemáticos de la biota en Biogeografía Histórica, Biología de la Conservación y estudios de Biodiversidad en general.El presente recurso contiene la información asociada a 44 registros provenientes de colectas realizadas durante los años 2022-2023, en áreas jurisdicción del departamento de Bolívar.
DOI: 10.15468/dl.yjskg3
title: Occurrence Download

description: A dataset containing 172 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helichrysum hamulosum",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 172 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016759-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j63kcg
title: Occurrence Download

description: A dataset containing 62018 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Tofieldia calyculata"
 ]
}

 The dataset includes 62018 records from 290 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016675-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f6pygv
title: Occurrence Download

description: A dataset containing 881 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Moluscos Marinhos de Augusto Nobre"
 ]
}

 The dataset includes 881 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000383-150504100648427/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jzokqt
title: Occurrence Download

description: A dataset containing 218 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sphaeropteris lepifera (J.Sm. ex Hook.) R.M.Tryon",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 218 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000383-150512124619364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3zccvt
title: Occurrence Download

description: A dataset containing 146 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Prosopis juliflora (Sw.) DC."
 ]
}

 The dataset includes 146 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0184128-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e6maba
title: Occurrence Download

description: A dataset containing 779 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "TaxonKey is Asparagus setaceus (Kunth) Jessop"
 ]
}

 The dataset includes 779 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182311-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qkfga3
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Allium phthioticum Boiss. & Heldr.",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 17 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000383-150831095807960/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4kfuew
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Thalia geniculata L."
 ]
}

 The dataset includes 40 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0184130-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5c4797
title: Occurrence Download

description: A dataset containing 742582 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "PublishingCountry is Philippines"
 ]
}

 The dataset includes 742582 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182312-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j4qeyx
title: Occurrence Download

description: A dataset containing 29906 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Archilochus colubris (Linnaeus, 1758)"
 ]
}

 The dataset includes 29906 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0183867-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.siv6mc
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pristimantis fallax (Lynch & Rueda-Almonacid, 1999)"
 ]
}

 The dataset includes 37 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000383-150912100344238/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sx4m5t
title: Occurrence Download

description: A dataset containing 466039 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is 5480dea7-2a71-409b-a832-cbc5f1b5a2e6",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 466039 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058448-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tvvgnu
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Juniperus jaliscana Martinez",
 "DecimalLatitude is greater than or equal to -90",
 "DecimalLongitude is greater than or equal to -180"
 ]
}

 The dataset includes 21 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028162-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fyak8j
title: Occurrence Download

description: A dataset containing 9079 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apatura iris (Linnaeus, 1758)",
 {
 "or" : [
 "Geometry POLYGON((-26 90,-26 -90,180 -90,180 90,-26 90))",
 "Geometry POLYGON((-180 90,-180 -90,-169 -90,-169 90,-180 90))",
 "Geometry POLYGON((-169 90,-169 -90,-26 -90,-26 90,-169 90))"
 ]
 },
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9079 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000383-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.24yds7
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Talinum fruticosum (L.) Juss."
 ]
}

 The dataset includes 40 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0184133-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7mcrzr
title: Occurrence Download

description: A dataset containing 120 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-9.02465 36.97854,-8.90007 36.97854,-8.90007 37.07892,-9.02465 37.07892,-9.02465 36.97854))",
 "HasGeospatialIssue is false",
 "TaxonKey is Asio flammeus (Pontoppidan, 1763)"
 ]
}

 The dataset includes 120 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013012-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69ypjv
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neoregelia longisepala E.Pereira & I.A.Penna"
 ]
}

 The dataset includes 14 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0183871-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xtixt7
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cecilioides A.Férussac, 1814",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((117.18 3.11,117.18 11.79,130.96 11.79,130.96 3.11,117.18 3.11))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000383-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.