cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.yvttp7
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Carabus loschnikovii Fischer von Waldheim, 1823",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095136-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nbzkwp
title: Occurrence Download

description: A dataset containing 142779 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eptesicus serotinus (Schreber, 1774)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 142779 records from 2871 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095095-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hdm9g6
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Murraya glenieii Thwaites ex Oliv."
 ]
}

 The dataset includes 23 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057563-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5dh4a
title: Occurrence Download

description: A dataset containing 215095 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Moehringia trinervia (L.) Clairv."
 ]
}

 The dataset includes 215095 records from 1197 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057482-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q8apqj
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ocimum metallorum (P.A.Duvign.) A.J.Paton"
 ]
}

 The dataset includes 24 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057564-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w8ehr4
title: Occurrence Download

description: A dataset containing 218 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meiogyne monosperma (Hook.f. & Thomson) Heusden"
 ]
}

 The dataset includes 218 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057565-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.epy5n8
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Murraya kwangsiensis (C.C.Huang) C.C.Huang"
 ]
}

 The dataset includes 23 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057567-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jctbcr
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ocimum minutiflorum (Sebald) A.J.Paton"
 ]
}

 The dataset includes 17 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057568-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v94d3u
title: Occurrence Download

description: A dataset containing 2209 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepus saxatilis F.Cuvier, 1823"
 ]
}

 The dataset includes 2209 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057570-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gv36ga
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meiogyne oligocarpa B.Xue & Y.H.Tan"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057571-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bq9sj2
title: Occurrence Download

description: A dataset containing 89 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Murraya lucida (G.Forst.) Mabb."
 ]
}

 The dataset includes 89 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057572-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f6s3yf
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ocimum motjaneanum McCallum & K.Balkwill"
 ]
}

 The dataset includes 8 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057573-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.65cy2y
title: Occurrence Download

description: A dataset containing 133 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meiogyne pannosa (Dalzell) J.Sinclair"
 ]
}

 The dataset includes 133 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057574-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9x6se4
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Murraya macrophylla (C.C.Huang) F.J.Mou & D.X.Zhang"
 ]
}

 The dataset includes 29 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057575-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.223yzu
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ocimum natalense Ayob. ex A.J.Paton"
 ]
}

 The dataset includes 20 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057576-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fzxrb9
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meiogyne papuana I.M.Turner & Utteridge"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057577-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pznytq
title: Occurrence Download

description: A dataset containing 850 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((106.02239 14.14773,106.02439 12.70047,107.53134 12.68071,107.53447 12.83201,107.49722 12.86744,107.48041 12.93966,107.48531 13.02446,107.58681 13.27425,107.61909 13.36683,107.60692 13.52014,107.56069 13.63816,107.51445 13.74037,107.41606 13.7936,107.41606 13.96858,107.39045 14.11368,106.02239 14.14773))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (CR, EN, VU, NT)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 850 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057578-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ujzmdb
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Murraya microphylla (Merr. & Chun) Swingle"
 ]
}

 The dataset includes 67 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057580-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mma3cz
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ocimum nummularia (S.Moore) A.J.Paton"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057581-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.amstya
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Egypt",
 "TaxonKey is Camelus dromedarius Linnaeus, 1758"
 ]
}

 The dataset includes 50 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057583-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zz6nqm
title: Occurrence Download

description: A dataset containing 517 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meiogyne virgata (Blume) Miq."
 ]
}

 The dataset includes 517 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057584-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4fmmsp
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-83.87105 8.94262,-83.49107 8.94262,-83.49107 9.2951,-83.87105 9.2951,-83.87105 8.94262))",
 "HasGeospatialIssue is false",
 "TaxonKey is Bradypus variegatus Schinz, 1825"
 ]
}

 The dataset includes 87 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057585-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vr7dab
title: Occurrence Download

description: A dataset containing 170 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Murraya omphalocarpa Hayata"
 ]
}

 The dataset includes 170 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057586-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10895756
title: Dataset for 'Beyond bidirectional association: Distinguishing light verb constructions from other conventionalised noun-verb combinations in modern Tibetan'
DOI: 10.5281/zenodo.10895757
title: Dataset for 'Beyond bidirectional association: Distinguishing light verb constructions from other conventionalised noun-verb combinations in modern Tibetan'
DOI: 10.15468/dl.5y82q2
title: Occurrence Download

description: A dataset containing 2296 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ocimum obovatum E.Mey. ex Benth."
 ]
}

 The dataset includes 2296 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057587-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.34wuep
title: Occurrence Download

description: A dataset containing 142 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meistera aculeata (Roxb.) Škorničk. & M.F.Newman"
 ]
}

 The dataset includes 142 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057588-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10894817
title: Recovering true FRET efficiencies from smFRET investigations requires triplet state mitigation

description: This includes

1- the data set collected at 100mW = 0.04 kW/cm^2 for the Cy3-Cy5 dye pair that is reported in the paper in Figure 2c and SI Figure 14ab

2- Matlab script to do the simplified zeta correction and a Mathematica notebook to show the derivation of simplified zeta correction

3- the raw data corresponding to Figure 2c

----## Citations

If you use any of these shared materials, please use the relevant citatations:

  ```  * Avik K. Pati^{*}, Zeliha Kilic^{*}, Maxwell I. Martin, Daniel S. Terry, Alessandro Borgia, Sukanta Bar,    Steffen Jockusch, Roman Kiselev, Roger B. Altman, Scott C. Blanchard,    Recovering true FRET efficiencies from smFRET investigations requires triplet state mitigation,2024,Nature Methods  ```

----## Relevant Publications

In our smFRET data analysis, we used SPARTAN* Single-molecule imaging of non-equilibrium molecular ensembles on the millisecond scale:  [paper](https://www.nature.com/articles/nmeth.3769)
DOI: 10.5281/zenodo.10894818
title: Recovering true FRET efficiencies from smFRET investigations requires triplet state mitigation

description: This includes

1- the data set collected at 100mW = 0.04 kW/cm^2 for the Cy3-Cy5 dye pair that is reported in the paper in Figure 2c and SI Figure 14ab

2- Matlab script to do the simplified zeta correction and a Mathematica notebook to show the derivation of simplified zeta correction

3- the raw data corresponding to Figure 2c

----## Citations

If you use any of these shared materials, please use the relevant citatations:

  ```  * Avik K. Pati^{*}, Zeliha Kilic^{*}, Maxwell I. Martin, Daniel S. Terry, Alessandro Borgia, Sukanta Bar,    Steffen Jockusch, Roman Kiselev, Roger B. Altman, Scott C. Blanchard,    Recovering true FRET efficiencies from smFRET investigations requires triplet state mitigation,2024,Nature Methods  ```

----## Relevant Publications

In our smFRET data analysis, we used SPARTAN* Single-molecule imaging of non-equilibrium molecular ensembles on the millisecond scale:  [paper](https://www.nature.com/articles/nmeth.3769)
DOI: 10.15468/dl.652uzy
title: Occurrence Download

description: A dataset containing 9288 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Murraya paniculata (L.) Jacq."
 ]
}

 The dataset includes 9288 records from 357 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057589-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh0928731.09fu
title: SH0928731.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0928732.09fu
title: SH0928732.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0928733.09fu
title: SH0928733.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0928734.09fu
title: SH0928734.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0928735.09fu
title: SH0928735.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0928736.09fu
title: SH0928736.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0928737.09fu
title: SH0928737.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.