cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.8mc44/9
title: PCA scores 1

description: Principal Component Analysis scores based on sixteen morphological characters observed from 201 specimens examined in this study.
DOI: 10.5061/dryad.8t5d4/1
title: Table S4. Average ES values for each LULC type.

description: Average ES values for each LULC type. (See Table S1 for the description of the LULC types and Table S2 for units).
DOI: 10.5061/dryad.8t5d4/2
title: Table S1. Description of Land Use Land Cover (LULC) types identified at the River Piedra watershed.

description: Description of Land Use Land Cover (LULC) types identified at the River Piedra watershed.
DOI: 10.5061/dryad.8t5d4/3
title: Table S2.Ecosystem services assessed, indicators and source of information.

description: Ecosystem services assessed, indicators and source of information.
DOI: 10.5061/dryad.953dh/1
title: PONE-D-17-14144R1_Data spreadsheet_20170724_final
DOI: 10.5061/dryad.9c50s/19
title: hybridzone_samplelist_bie-fum_pcadapt&hiest

description: Sample list of bie-fum hybrid zone, determined using PCADAPT and HIEST.
DOI: 10.5061/dryad.9c50s/20
title: bayescan_bie&occ_locuslist

description: BAYESCAN bie and occ parent locus list.
DOI: 10.5061/dryad.9c50s/21
title: bayescan_bie&fum_locuslist

description: BAYESCAN bie and fum parent locus list.
DOI: 10.5061/dryad.9c50s/22
title: blast_bayescan&bgcoutlier_outlierstatus

description: BLAST: Outlier status of loci employed in gene function analyses.
DOI: 10.5061/dryad.9c50s/23
title: blast_bayescan&bgcoutlier_seqinfo

description: BLAST: Sequence information of flanking regions surrounding loci employed in gene function analyses.
DOI: 10.5061/dryad.9c50s/24
title: h_allsnp_genind

description: SNP data in genind format for heterozygosity analysis in R package ADEGENET.
DOI: 10.5061/dryad.9c50s/25
title: h_pooled_bie&fumparents_in

description: ADEGENET pooled bie and fum parent SNP data for heterozygosity analysis.
DOI: 10.5061/dryad.9f94k/1
title: data_Tuzun2017_EVA

description: Data used for the analysis of growth rate (longitudinal format).
DOI: 10.5061/dryad.bj7r3/1
title: Alabama black bear genotypes

description: Microsatellite genotypes for two populations of black bears in Alabama, northern Alabama (NAL), and the Mobile River Basin (MRB).  Both populations were exhaustively sampled via non invasive methods (hair snaring, and scat collection) over a 5 year period (2011-2015) for the MRB and a four year period for the NAL (2012-2015).  Also included are representative samples from adjoining states.
DOI: 10.5061/dryad.c565c/1
title: SeedlingsAR

description: Seedling (&lt;30cm) counts collected at Arid Recovery reserve by Chris Gordon in February 2013. "AR" is Arid Recovery. DV is Dodonaea viscosa, AL is Acacia ligulata. abbreviations in first column refer to exclosure/property on which transect conducted: fe = first expansion, me = main expansion, ne = northern expansion, a = andamooka station, d = dingo pen.
DOI: 10.5061/dryad.c565c/2
title: Seedlings Scotia

description: Field data on seedling (&lt;30cm height) abundance inside and outside rewilded areas. SC = Scotia, DV = Dodonaea viscosa, AL = Acacia ligulata. Abbreviations in column "transect" refer to specific exclosure/treatment area: S1 = Stage 1, S2 = Stage 3, S4 = Stage 4, NA = Nanya
DOI: 10.5061/dryad.c565c/3
title: Seed Removal and Culprits Arid Recovery

description: Field seed removal experiment inside and outside rewilded areas at Arid Recovery in August 2015 (Winter) and Summer 2016 (Summer). AR = Arid Recovery, DV = Dodonaea viscosa, AL = Acacia ligulata. Inside = Rewilded area, Outside = Depauperate area. Total Seeds Removed has maximum of 50. Treatments: bicarb = ant exclusion procedural control, control = control, coopex = ant exclusion, exclusion = mammal exclusion, procedural control = mammal exclusion procedural control. Hopper = Notomys alexis, Bettong = Bettongia lesueur. Hopper/Ants/Bettong/Bird refer to presence of spoor: 1 = present, 0 = not present.
DOI: 10.5061/dryad.c565c/4
title: Seed Removal and Culprits Scotia

description: Field seed removal experiment inside and outside rewilded areas at Scotia Wildlife Reserve in August 2015 (Winter) and Summer 2016 (Summer). SC = Scotia, DV = Dodonaea viscosa, AL = Acacia ligulata. Inside = Rewilded area, Outside = Depauperate area. Total Seeds Removed has maximum of 50. Treatments: bicarb = ant exclusion procedural control, control = control, coopex = ant exclusion, exclusion = mammal exclusion, procedural control = mammal exclusion procedural control. Bettong = Bettongia lesueur. Ants/Bettong/Bird refer to presence of spoor: 1 = present, 0 = not present.
DOI: 10.5061/dryad.ck800/1
title: Supplementary_data_sperm_activation_in_stickleback

description: Sperm velocity score numbers for threespine stickleback originating from saltwater and freshwater tested in saltwater and freshwater. Please see Supplementary 1 for a more detailed description.
DOI: 10.5061/dryad.dk2pm/1
title: Resident groups relocation data

description: txt files contain GPS data collected on resident groups during each visit. File name (e.g. AX141208amTIA.txt) returns information on: group identity (AX); date of data collection (141808); whether the visit was in the morning (am) or afternoon; and information on the observer (TIA). Single files contain information on: Latitude and longitude (Position); altitude (Altitude); time of data collection (Description). SB (under Description) returns the location of a sleeping burrow. R codes to merge all files and extract all necessary information are available through the corresponding author.
DOI: 10.5061/dryad.dk2pm/2
title: Dispersing coalitions relocation data

description: The file is a composite of movement data of all dispersing coalitions and sub-coalitions.
DOI: 10.5061/dryad.dk5dm/1
title: Data COTS density & reef substrate rugosity

description: Field surveys of crown-of-thorns seastar (COTS) population densities on 9 reef locations around Moorea, French Polynesia. Paired day and night surveys were performed every 6 months in triplicate 200m2 permanent-transects over a 2 year period. Reef substrate rugosity was also quantified.
DOI: 10.5061/dryad.g031s/1
title: Sutter-JAPPL-2016-01166
DOI: 10.5061/dryad.hg53s/2
title: long-term exp phyto

description: Phytoplankton community data (cell counts) after 27 day grazing experiment
DOI: 10.5061/dryad.hg53s/3
title: long term exp daphnia

description: Daphnia experimental population sizes throughout long term experiment, measured every 3 days
DOI: 10.5061/dryad.k302g/1
title: SSR dataset from P. glauca

description: First column: localisation	(either Mediterranean Sea: Gulf of Lion/Malta/Greece, Atlantic Ocean: Azores/Spain or Pacific Ocean: Hawaii/Australia/New Zealand). Second column:individual	(individual tag). Others columns: the 9 SSR selected (BEF94, CY92Z, TB02, DZOXN, TB04, TB01, FV6T5, A2ASY and EWU1E). Missing loci are coded with "0".
DOI: 10.5061/dryad.k302g/2
title: Cytb sequences from Prionace glauca

description: P. glauca cytb sequences of 758 bp length.
DOI: 10.5061/dryad.m80d7/1
title: Shotgun sequences for bird remains from Swahili coast archaeological sites

description: Shotgun sequences for bird remains from Swahili coast archaeological sites. Files that are labeled "JK" correspond to specific archaeological bone samples, each 4-digit number representing a single library: JK2992, JK3005, JK2999, JK2989, JK3002, JK2995, JK2993, JK3004, JK3003, JK2994, JK2988, JK3001, JK2990, JK3008, JK2998, JK3007, JK1996, JK3006, JK3000, JK2991, JK2997 . The other files represent extraction blanks (EBB1, EBB2) and library blanks (LBB2, LBB1). Please see supplementary data in the Prendergast et al. paper to link JK numbers to archaeological contexts.
DOI: 10.5061/dryad.nc45r/1
title: Plant, earthworms, and soil properties – data used in the publication

description: For details of plant biomass recounted to sown seed see methods and Table 1 of the publication. For details of other variables see methods and Appendix S1 of the publication.
DOI: 10.5061/dryad.s1432/1
title: C&S2017.Complete.Data.Set

description: Source articles, effect sizes & associated variances, and assorted independent variables used to produce the models presented in the article.
DOI: 10.5061/dryad.t3t7p/1
title: Foo et al. 2017- ILD
DOI: 10.5061/dryad.v3462/1
title: ShellRehan2017_AllelicProfiles

description: Allelic profile data for Ceratina calcarata nestmates. Data was generated from microsatellite loci and was called manually using Peak Scanner. Data can be used for relatedness analyses.
DOI: 10.5061/dryad.v3462/2
title: ShellRehan2017_DemographicData

description: Nest demographic data for Ceratina calcarata, collected during nest dissections during the 2014-2016 field seasons. Data file includes information regarding nest type, maternal body size, brood composition (e.g. clutch size; male and female counts; female:male ratio), and brood survivorship (e.g. counts of parasitism; die-off; total live brood).
DOI: 10.5061/dryad.vk42h/1
title: Pfister_JEcology2017_0424_dryad

description: Data for all figures and tables contained in the main body of the manuscript are included in 4 worksheets.The kelp species data as well as environmental data are included, on both yearly and monthly time scales. The interpretation of kelp bed area from Cameron (1915) is also included. Race Rocks sst data from Canada are also present.
DOI: 10.5061/dryad.vv469/51
title: imputed-seq-genotypes-12k-Chr19.33010000-34010000.vcf

description: Imputed genotypes for variants within 1Mbp of the Chr19:33.51 LC QTL, for 12,000 animals.
DOI: 10.5061/dryad.vv469/52
title: imputed-seq-genotypes-12k-Chr19.42490000-43490000.vcf

description: Imputed genotypes for variants within 1Mbp of the Chr19:42.99 LC QTL, for 12,000 animals.
DOI: 10.5061/dryad.vv469/53
title: imputed-seq-genotypes-12k-Chr19.60630000-61630000.vcf

description: Imputed genotypes for variants within 1Mbp of the Chr19:61.13 LC QTL, for 12,000 animals.
DOI: 10.5061/dryad.vv469/54
title: imputed-seq-genotypes-12k-Chr20.31190000-32190000.vcf

description: Imputed genotypes for variants within 1Mbp of the Chr20:31.69 LY QTL, for 12,000 animals.
DOI: 10.5061/dryad.vv469/55
title: imputed-seq-genotypes-12k-Chr20.57950000-58950000.vcf

description: Imputed genotypes for variants within 1Mbp of the Chr20:58.45 LC QTL, for 12,000 animals.
DOI: 10.5061/dryad.vv469/56
title: imputed-seq-genotypes-Chr26.22460000-23460000.vcf

description: Imputed genotypes for variants within 1Mbp of the Chr26:22.96 LY QTL, for 12,000 animals.
DOI: 10.5061/dryad.vv469/57
title: imputed-seq-genotypes-12k-Chr27.35710000-36710000.vcf

description: Imputed genotypes for variants within 1Mbp of the Chr27:36.21 LC QTL, for 12,000 animals.
DOI: 10.5061/dryad.vv469/58
title: imputed-seq-genotypes-12k-Chr28.6060000-7060000.vcf

description: Imputed genotypes for variants within 1Mbp of the Chr28:6.56 LC QTL, for 12,000 animals.
DOI: 10.17632/b7nm58426x.1
title: Data for: Economic Load Sharing and Power Quality Enhancement in an Islanded Microgrid using D-STATCOM based on Seeker Optimization Approach
DOI: 10.17632/fnkgnzbsb3.1
title: Data for: Economic Load Sharing and Power Quality Enhancement in an Islanded Microgrid using D-STATCOM based on Seeker Optimization Approach
DOI: 10.17632/gstpwdt3xg.1
title: Data for: Economic Load Sharing and Power Quality Enhancement in an Islanded Microgrid using D-STATCOM based on Seeker Optimization Approach
DOI: 10.5061/dryad.10b93/1
title: EnvironmentData

description: A map of the study region was divided into 150 m2 grid cells (n = 200). We then defined the habitat type of the cell, estimated the risk of deterrence by baboon rangers and food rewards for each cell. The risk of baboons being deterred by ‘rangers’ range from likely deterrence (red, score 22) to passive monitoring (green, score 0). The energy available from potential food items is presented as the mean kcal/bite ranging from 0, to 22.6. Cells were categorised as one of five broad habitat categories according to their dominant features (fynbos, trees, meadows, vineyards and urban areas) based on researcher knowledge of the site and images from Google Earth (accessed 06/06/2014).
DOI: 10.5061/dryad.10b93/2
title: TimeBudget

description: To compare focal baboon activity budgets to those published in the literature, we conducted 30 minute direct focal observations of each male (n=311; mean +/- sd per baboon = 51.8 +/- 0.7). At each minute we recorded the baboons’ instantaneous behaviour (classified as resting (Res), grooming (Soc), foraging (For) or travelling (Mov)). The total amount of observations per male was given as (Obs).
DOI: 10.5061/dryad.10b93/3
title: CollarData

description: Eight adult male baboons within our focal troop were cage-trapped before being sedated by a certified veterinary and fitted with a custom-built tracking collar. Collars weighed less than 2.5% of the body mass of the baboons and were approved for use by Swansea University Ethics Committee (Swansea University IP-1314-5). Collars were equipped with sensors recording GPS every 5 minutes and acceleration in 3 axes at 40 Hz. Data were recorded from 7:30 am to 6:00 pm and only data recorded between sunrise and sunset according to the South African Astronomical Observatory were selected resulting in 6,325 fixes. Any pair of successive fixes more than 1 km apart were assumed to be errors, and removed, resulting in 6,274 fixes. Ad-hoc checks of the data where baboons cross known landmarks indicate positional accuracy of &lt;10m for processed GPS data. Latitudes and longitudes are given in WGS84. Acceleration was recorded continuously at 40 Hz for 5 individuals and at 20 Hz for one individual (LM). Acceleration raw data were first decomposed into static and dynamic acceleration with a running mean of two seconds then we calculated the Vector of the Dynamic Body Acceleration (VeDBA) calculated from dynamic acceleration data. We superimposed the GPS data with (1) the map of the risk of deterrence, obtained via interview with baboon rangers (scores ranging from 0 for low risks of being deterred to 22 for high risks); (2) the habitat map were habitats were categorised as one of five broad habitat categories (fynbos, trees, meadows, vineyards and urban areas) based on researcher knowledge of the site and images from Google Earth (accessed 06/06/2014).
DOI: 10.5061/dryad.15249/1
title: A_priori_morphospace_analysis

description: This folder contains examples and code for conducting the a prioiri leaf scoring analysis.
DOI: 10.5061/dryad.15249/2
title: Heteroblasty_3_species

description: For each of the three focal species, V. dentatum, V. acerifolium, and V. rafinesquianum leaf images, chain code, and a datasheet are included.
DOI: 10.5061/dryad.15249/3
title: Aboretum_heteroblasty_survey

description: This folder contains data and images for the 25 species collected at the Arnold Arboretum (Figure 6, Table S1).
DOI: 10.5061/dryad.15249/4
title: Viburnum-wide_shape_images

description: This folder contains image files for all leaves used in the Viburnum-wide analyses.
DOI: 10.5061/dryad.1pm20/1
title: Unfiltered 16S fish mitochondrial DNA sequences amplified from seawater samples collected in the Red Sea

description: Unfiltered 16S fish mitochondrial DNA sequences amplified from seawater samples collected at inshore, midshore, and offshore coral reefs, as well as a boat harbor along the central Red Sea coastline near Thuwal, Saudi Arabia. File names are structured as follows: sequencingrun_gene_samplesource_sitename_sampleID_forwardMIDtag_reverseMIDtag. Example: FTP77_Fish16S_Water_TahlaNorthExposed_AWFSF151469_F750_R637.
DOI: 10.5061/dryad.23s61/1
title: gene_expression

description: contains all FPKM estimates plus data for correlation between expression and divergence
DOI: 10.5061/dryad.23s61/2
title: DoS

description: contains complete list of polymorphisms (pN and pS) at coverage&gt;20, and calculations of DoS
DOI: 10.5061/dryad.23s61/3
title: dN_dS_omega

description: dN, dS, omega per gene and per population comparison
DOI: 10.5061/dryad.2qd07/1
title: 3D model of anterior supragnathal
DOI: 10.5061/dryad.2qd07/2
title: 3D model of infragnathal
DOI: 10.5061/dryad.2qd07/3
title: 3D model of Meckel's cartilage
DOI: 10.5061/dryad.2qd07/4
title: 3D model of suborbital plate
DOI: 10.5061/dryad.2qd07/5
title: PSG_LG movie

description: Movie, ANU 244, rotation of the in situ posterior supragnathal and infragnathal
DOI: 10.5061/dryad.3gq12.1
title: Data from: Parsing parallel evolution: ecological divergence and differential gene expression in the adaptive radiations of thick-lipped Midas cichlid fishes from Nicaragua
DOI: 10.5061/dryad.3gq12.2/1.1
title: Manousakietal_transcripts

description: Transcripts built from assembling raw reads (with oases v0.1.22) that have significant similarity with known vertebrate proteins.
DOI: 10.5061/dryad.3gq12.2/2.1
title: LippyProject_Ecological_data

description: Ecological data
DOI: 10.5061/dryad.3gq12.2/3.1
title: lippy vs non lippy body shape

description: A tps file that contains the raw landmark coordinates and associated ID's for all 777 specimens used for body shape analysis.
DOI: 10.5061/dryad.4sf85/1
title: Sequences of leaf UniTransModels from Astragalus membranaceus (Huangqi)

description: This FASTA format file contains sequences of Unique Transcription Models (UniTransModel) from the leaf tissue of Astragalus membranaceus (Huangqi) using PacBio Iso-Seq technology.
DOI: 10.5061/dryad.4sf85/2
title: Sequences of root UniTransModels from Astragalus membranaceus (Huangqi)

description: This FASTA format file contains sequences of Unique Transcription Models (UniTransModel) from the root tissue of Astragalus membranaceus (Huangqi) using PacBio Iso-Seq technology.
DOI: 10.5061/dryad.4sf85/3
title: Sequences of isoforms of leaf UniTransModels from Astragalus membranaceus (Huangqi)

description: This FASTA format file contains sequences of transcription isoforms of Unique Transcription Models (UniTransModel) from the leaf tissue of Astragalus membranaceus (Huangqi) using PacBio Iso-Seq technology.
DOI: 10.5061/dryad.50fj0/1
title: Behavioral guide dog data

description: This is a data set for a study of the association of maternal style and young adult temperament and cognition with program outcome in a population of guide dogs.
DOI: 10.5061/dryad.71c6r/1
title: distance to water data 5 arc min

description: This dataset describes the euclidean distance (i.e. straight line; in meters) of each given raster cell to the closest freshwater feature (lake or river). Resolution 5 arc min.
DOI: 10.5061/dryad.71c6r/2
title: distance to water data 30 arc sec

description: This dataset describes the euclidean distance (i.e. straight line; in meters) of each given raster cell to the closest freshwater feature (lake or river). Resolution 30 arc seconds.
DOI: 10.5061/dryad.770sn/1
title: Variation in color and chemical defence in burying beetles_Lindstedt et al

description: Individual data for the variation in size and colour of the orange and black marking and volume of anal fluid produced under threat in N. vespilloides burying beetles. First sheet includes the data and second short explanations for the variables measured.
DOI: 10.5061/dryad.770sn/2
title: Bioassays with ants_pairwise tests_10% anal fluid solutions_Lindstedt et al.

description: Data about the bioassays with wood ants for the 10% concentration experimental fluids. First sheet includes the data and second short description of the variables.
DOI: 10.5061/dryad.770sn/3
title: Bioassays with ants_pairwise tests_1% anal fluid solutions_Lindstedt et al.

description: Data about the bioassays with wood ants with 1 % experimental solutions. First sheet includes the data and the second one includes the short description of the variables.
DOI: 10.5061/dryad.7b73j/1
title: Original data set

description: Please find the original MRI data in the MRI data file, and the histology image in the Histology file.
All MRI data (referring to the .dat binary files) was from a 3 T clinical MR system (Tim Trio, Siemens, Erlangen, Germany) without using external ECG trigger and respiratory motion sensor. The data can be loaded, viewed, and analyzed with MATLAB 2013a (Mathworks Inc., Natick, MA, USA).
After MR scan, all mice were re-anaesthetized and sacrificed by rapid excision of the heart. The heart was then rinsed in 0.9% NaCl, frozen and manually sectioned into 5-6 short-axis slices with thickness of ~1.5 mm from apex to base. The slices were incubated with 0.1% triphenyltetrazolium chloride (TTC) for 15 minutes, and photographed with a digital camera and prepared for further analysis (referring to the histology image).
DOI: 10.5061/dryad.7hm1m/6
title: Raw Extracellular Neural Data and Stimulus Data

description: Column one and two for the files labeled M1 through M25 are the raw neural voltage data and the corresponding motor voltage stimulus sampled at 40 kHz. M# indicates the particular moth used for experimentation. The raw neural data and stimulus data for M26 through M33 (both sampled at 40 kHz) were split into two files respectively called “M#_Raw Neural Data.txt” and “M#_ Stimulus Data.txt”.  Files labeled M13, M15, M18, M19, and M20 had an additional step stimulus preceding the delivery of the white noise stimulus. A 0.2 Hz square wave stimulus of 4 V amplitude was interjected between the sinusoidal and white noise stimulus segments. The duration of the step stimulus was 16 seconds (640000 samples). There was a rest period of 1 second between the sinusoidal and the step function as well as between the step and white noise stimulus. Moreover, the Raw Neural Data files for M26, M28, M31, M32, and M33 contained multiple columns. Each column represented the neural data recorded from a particular recording site on the multi-site extracellular electrode. Having neural data from multiple recoding sites on the electrode improved spike sorting. These Data were acquired and saved in Matlab. Moreover, these data consisted of multiple chunks (6 chunks), which were concatenated together.
DOI: 10.5061/dryad.8p33r/1
title: Replication Data (CSV)
DOI: 10.5061/dryad.8p33r/2
title: Replication Data (Stata)
DOI: 10.5061/dryad.9c50s/26
title: h_pooled_bie&occ&fumparents_in

description: ADEGENET pooled bie, occ, and fum parent SNP data for heterozygosity analysis.
DOI: 10.5061/dryad.9c50s/27
title: h_pooled_bie&occparents_in

description: ADEGENET pooled bie and occ parent SNP data for heterozygosity analysis.
DOI: 10.5061/dryad.9c50s/28
title: h_separate_populations_in

description: ADEGENET separate population SNP data for heterozygosity analysis.
DOI: 10.5061/dryad.9c50s/29
title: ld_bfoutliers_bfadvhybrids_in

description: LD analysis bie-fum advanced hybrids genotypes for bie-fum gene flow outliers.
DOI: 10.5061/dryad.9c50s/30
title: ld_bfoutliers_boadvhybrids_in

description: LD analysis bie-occ advanced hybrids genotypes for bie-fum gene flow outliers.
DOI: 10.5061/dryad.9c50s/31
title: ld_bfoutliers_bparents_in

description: LD analysis bie parents genotypes for bie-fum gene flow outliers.
DOI: 10.5061/dryad.9c50s/32
title: ld_bfoutliers_fparents_in

description: LD analysis fum parents genotypes for bie-fum gene flow outliers.
DOI: 10.5061/dryad.9c50s/33
title: ld_bfoutliers_oparents_in

description: LD analysis occ parents genotypes for bie-fum gene flow outliers.
DOI: 10.5061/dryad.9c50s/34
title: ld_booutliers_bfadvhybrids_in

description: LD analysis bie-fum advanced hybrids genotypes for bie-occ gene flow outliers.
DOI: 10.5061/dryad.9c50s/35
title: ld_booutliers_boadvhybrids_in

description: LD analysis bie-occ advanced hybrids genotypes for bie-occ gene flow outliers.
DOI: 10.5061/dryad.c565c/5
title: Spotlighting_Transects

description: Field spotlighting surveys at Scotia and Arid Recovery (AR) inside and outside of rewilded areas.