cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8323613
title: MYC enhancer invasion promotes prognostic cancer type-specific gene programs through an epigenetic switch

description: Pre-processed data for reproduction of the figure in MYC enhancer invasion promotes prognostic cancer type-specific gene programs through an epigenetic switch
DOI: 10.5281/zenodo.8323614
title: MYC enhancer invasion promotes prognostic cancer type-specific gene programs through an epigenetic switch

description: Pre-processed data for reproduction of the figure in MYC enhancer invasion promotes prognostic cancer type-specific gene programs through an epigenetic switch
DOI: 10.5281/zenodo.10199787
title: Precipitation hydrogen isoscape for East China from 1969 to 2017 generated based on data fusion of iGCMs simulations

description: The dataset includes the stable hydrogen isotope of precipitation for East China over the 1969-2017 period, at a spatial resolution of 50-60 km and a monthly temporal resolution. This dataset was built based on the Convolutional Neural Network (CNN) method, fusing observations and isotope-equipped general circulation models (iGCMs) simulations of hydrogen isotope composition. Some physical-based ancillary data are also introduced in the fusion methods, including elevation and meteorological data, to enrich the climate and terrain information in the process of data fusion.
description: Related dataset: 
Precipitation oxygen isoscape for mainland China from 1870 to 2017 generated based on data fusion and bias correction of iGCMs simulations (https://doi.org/10.5281/zenodo.7306199)
DOI: 10.6084/m9.figshare.24581193
title: CAM5 model data

description: 1、Globalsst_P1_U.0001-0020，Globalsst_P1_V.0001-0020,Globalsst_P2_U.0001-0020, and Globalsst_P2_V.0001-0020 are for CAM5_SST_P1 (1988-2001) and CAM5_SST_P2 (2002-2018) simulated by the NCAR CAM5 model with a horizontal resolution of 2.5°´1.89° in longitude and latitude and prescribed SST during 20 years.
DOI: 10.6084/m9.figshare.24619227
title: Adiantum capillus-veneris cds file

description: CDS file for maidenhair fern (Adiantum capillus-veneris) genome. Please cite the corresponding paper - <b><i>The genome of homosporous maidenhair fern sheds light on the euphyllophyte evolution and defences,</i></b><b><i> </i></b>when using the data.
DOI: 10.6084/m9.figshare.24619227.v1
title: Adiantum capillus-veneris cds file

description: CDS file for maidenhair fern (Adiantum capillus-veneris) genome. Please cite the corresponding paper - <b><i>The genome of homosporous maidenhair fern sheds light on the euphyllophyte evolution and defences,</i></b><b><i> </i></b>when using the data.
DOI: 10.6084/m9.figshare.24619215
title: Adiantum capillus-veneris peptide sequences

description: Peptide sequences file for maidenhair fern (<i>Adiantum capillus-veneris</i>) genome. Please cite the corresponding paper - <b><i>The genome of homosporous maidenhair fern sheds light on the euphyllophyte evolution and defences,</i></b><b><i> </i></b>when using the data.
DOI: 10.5281/zenodo.10199968
title: Ethanol endometrioma sclerotherapy: safety through eight years of experience.
DOI: 10.5281/zenodo.10199969
title: Ethanol endometrioma sclerotherapy: safety through eight years of experience.
DOI: 10.6084/m9.figshare.24618984
title: Survey data for plankton with spatial and water quality indicators in Poyang Lake during the wet period, 2019.

description: Data corresponding to the paper "Plankton transport dynamics of Poyang Lake in relation to spatial and environmental controlling regulators during the wet period". Including:Table A1 Geographical location information of sampling sites in Poyang LakeTable A2 Poyang Lake water quality survey dataTable A3 Poyang Lake phytoplankton survey dataTable A4 Poyang Lake zooplankton survey dataTable A5 Diversity indices of phytoplankton and zooplankton in Poyang Lake
DOI: 10.5281/zenodo.10066515
title: Experimental dataset: stereo-DIC experiment on uniaxially loaded, S-Shaped, high density polyethylene test sample

description: Stereo-DIC experiments were performed on uniaxially loaded, s-shaped, high-density polyethylene test sample. 100 stationary images of unloaded test sample were taken for evaluation of DIC noise floor. Stereo calibration image dataset, involving a calibration target with rectangular grid (12 by 9 and pitch of 10 mm), is also made available. Tensile load from the test bench load-cell sampled at each moment an image is captured is available.
DOI: 10.5281/zenodo.10066516
title: Experimental dataset: stereo-DIC experiment on uniaxially loaded, S-Shaped, high density polyethylene test sample

description: Stereo-DIC experiments were performed on uniaxially loaded, s-shaped, high-density polyethylene test sample. 100 stationary images of unloaded test sample were taken for evaluation of DIC noise floor. Stereo calibration image dataset, involving a calibration target with rectangular grid (12 by 9 and pitch of 10 mm), is also made available. Tensile load from the test bench load-cell sampled at each moment an image is captured is available.
DOI: 10.6084/m9.figshare.24618984.v2
title: Survey data for plankton with spatial and water quality indicators in Poyang Lake during the wet period, 2019.

description: Data corresponding to the paper "Plankton transport dynamics of Poyang Lake in relation to spatial and environmental controlling regulators during the wet period". Including:Table A1 Geographical location information of sampling sites in Poyang LakeTable A2 Poyang Lake water quality survey dataTable A3 Poyang Lake phytoplankton survey dataTable A4 Poyang Lake zooplankton survey dataTable A5 Diversity indices of phytoplankton and zooplankton in Poyang Lake
DOI: 10.6084/m9.figshare.24618984.v1
title: Open Research for "Plankton transport dynamics of Poyang Lake in relation to spatial and environmental controlling regulators during the wet period"

description: Plankton survey of Poyang Lake with spatial and environmental controlling regulators during the wet period, 2019.
DOI: 10.6084/m9.figshare.24316519
title: High-Resolution 2D Cartesian and 3D Radial Phase Encoded GRE of 8 Transmit Channels with a Siemens 7T pTx System (Phantom; VB17 RAW Data)

description: High-Resolution 3D Radial Phase Encoded GRE of 8 Transmit Channels with a Siemens 7T pTx System (Phantom; VB17 RAW Data)If you find this helpful, please cite the following papers: Dietrich, S, Aigner, CS, Kolbitsch, C, et al. 3D Free-breathing multichannel absolute B1+ Mapping in the human body at 7T. Magn Reson Med. 2021; 85: 2552– 2567. https://doi.org/10.1002/mrm.28602Aigner, CS, Dietrich, S, Schaeffter, T and Schmitter, S, Calibration-free pTx of the human heart at 7T via 3D universal pulses, Magn Reson Med. 2022; 87: 70-84. https://doi.org/10.1002/mrm.28952
DOI: 10.6084/m9.figshare.24316519.v2
title: High-Resolution 2D Cartesian and 3D Radial Phase Encoded GRE of 8 Transmit Channels with a Siemens 7T pTx System (Phantom; VB17 RAW Data)

description: High-Resolution 3D Radial Phase Encoded GRE of 8 Transmit Channels with a Siemens 7T pTx System (Phantom; VB17 RAW Data)If you find this helpful, please cite the following papers: Dietrich, S, Aigner, CS, Kolbitsch, C, et al. 3D Free-breathing multichannel absolute B1+ Mapping in the human body at 7T. Magn Reson Med. 2021; 85: 2552– 2567. https://doi.org/10.1002/mrm.28602Aigner, CS, Dietrich, S, Schaeffter, T and Schmitter, S, Calibration-free pTx of the human heart at 7T via 3D universal pulses, Magn Reson Med. 2022; 87: 70-84. https://doi.org/10.1002/mrm.28952
DOI: 10.6084/m9.figshare.24316519.v3
title: High-Resolution 2D Cartesian and 3D Radial Phase Encoded GRE of 8 Transmit Channels with a Siemens 7T pTx System (Phantom; VB17 RAW Data)

description: High-Resolution 3D Radial Phase Encoded GRE of 8 Transmit Channels with a Siemens 7T pTx System (Phantom; VB17 RAW Data)If you find this helpful, please cite the following papers: Dietrich, S, Aigner, CS, Kolbitsch, C, et al. 3D Free-breathing multichannel absolute B1+ Mapping in the human body at 7T. Magn Reson Med. 2021; 85: 2552– 2567. https://doi.org/10.1002/mrm.28602Aigner, CS, Dietrich, S, Schaeffter, T and Schmitter, S, Calibration-free pTx of the human heart at 7T via 3D universal pulses, Magn Reson Med. 2022; 87: 70-84. https://doi.org/10.1002/mrm.28952
DOI: 10.6084/m9.figshare.24534583.v1
title: <b>The complete mitochondrial genome of the Fasin Rainbowfish (</b><b><i>Melanotaenia fasinensis</i></b><b>: Melanotaeniidae) from Bird’s Head of Papua, Indonesia</b>

description: The present study applied a next-generation sequencing approach to determine the entire mitochondrial genome sequence of <i>Melanotaenia fasinensis</i>, an endemic species confined in the karst landscape belonging to the family of Melanotaeniidae. The mitochondrial genome is comprised of 13 protein-coding genes. The utilization of a phylogenetic tree that relies on 13 protein-coding genes (PCGs) offers significant molecular information that can be used for subsequent analysis of the phylogeographic and evolutionary aspects of Melanotaeniidae.
DOI: 10.34740/kaggle/dsv/7033383
title: Egypt Gold Prices | Daily Updated
DOI: 10.18462/iir.icr.2023.0055
title: Experimental characteristics analysis of the closed‐cycle Joule–Thomson refrigerator operating with a nitrogen‐hydrocarbon refrigerant mixture in transient modes.
DOI: 10.18462/iir.icr.2023.0064
title: Numerical Model of Water Drainage Performance of Microchannel Heat Exchangers Applied in Heat Pump Type Air Conditioner.
DOI: 10.18462/iir.icr.2023.0054
title: Development of NH3/H2O absoption chillers for negative cooling in industrial solar systems.
DOI: 10.18462/iir.icr.2023.0298
title: Simulation study on atomization characteristics of swirl nozzle for artificial snowmaking.
DOI: 10.18462/iir.icr.2023.0049
title: Investigation methodology for a better knowledge of the French food retail sector.
DOI: 10.18462/iir.icr.2023.0050
title: Analysis of refrigerant R452B in use-phase versus pristine conditions using gas chromatography.
DOI: 10.34740/kaggle/dsv/7033449
title: AutoXGB
DOI: 10.34740/kaggle/dsv/7033450
title: OnlineFree
DOI: 10.6084/m9.figshare.24619248
title: House Price Data of Wuhan

description: WHHP data set describes community-level house prices in Wuhan, the capital of Hubei province in the central region of China. The WHHP data set contains 9 variables collected in 2015: <i>Annual_AQI</i>, <i>Pop_Den, Green_Rate, GDP_per_Land, Rev_per_Land, FAI_per_Land, TertI_Rate, Den_POI</i>.
DOI: 10.5281/zenodo.10124700
title: Ovarian cancer is detectable from peripheral blood using machine learning over T cell repertoires

description: To see if TCR repertoire obtained from peripheral blood is associated with tumor status, we collected blood samples from 85 women with or without ovarian cancer and produced T cell receptor information. Using machine learning, we stratified, with high success rates, the two groups, thereby associating peripheral blood T cell repertoire with the existence of ovarian cancer tumors.
DOI: 10.5281/zenodo.7749999
title: Ovarian cancer is detectable from peripheral blood using machine learning over T cell repertoires

description: To see if TCR repertoire obtained from peripheral blood is associated with tumor status, we collected blood samples from 85 women with or without ovarian cancer and produced T cell receptor information. Using machine learning, we stratified, with high success rates, the two groups, thereby associating peripheral blood T cell repertoire with the existence of ovarian cancer tumors.
DOI: 10.5281/zenodo.7750000
title: Ovarian cancer is detectable from peripheral blood using machine learning over T cell repertoires

description: To see if TCR repertoire obtained from peripheral blood is associated with tumor status, we collected blood samples from 97 women with or without ovarian cancer and produced T cell receptor information. Using machine learning, we stratified, with high success rates, the two groups, thereby associating peripheral blood T cell repertoire with the existence of ovarian cancer tumors.
DOI: 10.13139/ornlnccs/1869409
title: AISD HOMO-LUMO

description: Molecules with HOMO-LUMO gap calculated using DFTB. The molecules are a subset of a dataset generated for previous work (https://www.biorxiv.org/content/10.1101/2021.12.10.471928v1), which augmented the Enamine REAL database (https://enamine.net/). Molecules may be available for purchase through Enamine.
DOI: 10.25493/2mx9-3xf
title: Anterograde visualization of projections from orbitofrontal cortex in rat (v1.1)

description: The project was initiated to determine the projections of the orbital frontal cortex (OFC) to the parahippocampal region in the rat, using the anterograde tracers biotinylated dextran amine (BDA) and Phaseolus vulgaris-leucoagglutinin (PHA-L). The anterograde tracers were injected into four subdivisions of OFC; the medial (MO), ventral (VO), ventrolateral (VLO) and lateral (LO) orbitofrontal areas. All brains were cut in the coronal plane at 50 µm thickness, and every 6th section was sampled for analysis. Complete series throughout the anterior-posterior extent of each brain form the core of the dataset, with a total of 26 animals successfully injected. Out of those 26, 18 were injected with BDA, 4 injected with PHA-L, and 4 injected with both BDA and PHA-L. Locations of all individual injection sites are annotated in the datasets. All sections are in the correct anterior-posterior order. The data show a topographically organized connectivity from OFC to parahippocampal areas, in addition to all other labeled projections throughout the brain.
DOI: 10.25493/3bht-24f
title: Axonal projections from the forelimb representation of the rat primary sensorimotor cortex (case R601)

description: Bright-field microscopy images of serial coronal brain sections showing anterogradely labeled axons in an adult male Wistar rat following injection of biotinylated dextran amine in the forelimb representation of the primary sensory / motor cortex. The labeling was visualized histologically. The presence of cytochrome oxidase positive barrels has been visualized in selected sections through the sensorimotor cortex.
DOI: 10.25493/98cj-7bu
title: Axonal projections from the D2 whisker representation of the rat primary somatosensory cortex (case R602)

description: Bright-field microscopy images of serial coronal brain sections showing anterogradely labeled axons in an adult male Wistar rat following injection of biotinylated dextran amine in the D2 whisker representation of the primary somatosensory cortex. The labeling was visualized histologically in sections counterstained to visualize cytoarchitecture. The presence of cytochrome oxidase positive barrels has been visualized in selected sections through the sensorimotor cortex.
DOI: 10.25493/9mnv-y97
title: Axonal projections from the D3 whisker representation of the rat primary somatosensory cortex (case R604)

description: Bright-field microscopy images of serial coronal brain sections showing anterogradely labeled axons in an adult male Sprague Dawley rat following injection of biotinylated dextran amine in the D3 whisker representation of the primary somatosensory cortex. The labeling was visualized histologically in sections counterstained to visualize cytoarchitecture. The presence of cytochrome oxidase positive barrels has been visualized in selected sections through the sensorimotor cortex.
DOI: 10.25493/fkm4-zcc
title: Anterogradely labeled axonal projections from the posterior parietal cortex in rat

description: High-resolution bright-field microscopy images of coronal brain sections showing anterogradely labeled axons originating from different parts of the posterior parietal cortex (PPC) of young adult female Sprague Dawley rats. The dataset includes image series from 8 brains in which the anterograde tracers, _Phaseolus vulgaris leucoagglutinin_ (PHA-L) or biotinylated dextran amine (BDA, 10 kDa) were injected into discrete subregions of the PPC. The data provide an overview of the efferent connections of the entire PPC region.
DOI: 10.25493/g6vp-0a
title: Axonal projections from the forelimb representation of the rat primary somatosensory cortex (case R603)

description: Bright-field microscopy images of serial coronal brain sections showing anterogradely labeled axons in an adult male Sprague Dawley rat following injection of biotinylated dextran amine in the forelimb representation of the primary somatosensory cortex. The labeling was visualized histologically in sections counterstained to visualize cytoarchitecture. The presence of cytochrome oxidase positive barrels has been visualized in selected sections through the sensorimotor cortex.
DOI: 10.5281/zenodo.8153260
title: Dataset for the genome of medicinal plant Sophora flavescens has undergone significant expansion of both transposons and genes

description: <em>Sophora flavescens</em> is a medicinal plant in the genus Sophora of the Fabaceae family. The root of <em>S. flavescens</em> is known in China as Kushen and has a long history of wide use in multiple formulations of Traditional Chinese Medicine (TCM). However, there is little genomic information available for <em>S. flavescens</em>, which has greatly hindered the breeding of <em>S. flavescens</em> and characterisation of bioactive compounds. Therefore, in this study, we used third-generation Nanopore long-read sequencing technology combined with Hi-C scaffolding technology to <em>de novo</em> assemble the <em>S. flavescens</em> genome. We obtained a chromosomal level high-quality <em>S. flavescens</em> draft genome. The draft genome size is approximately 2.08 Gb, with more than 80% annotated as Transposable Elements (TEs). We also annotated 60,485 genes and examined their expression profiles in leaf, stem and root tissues. We also characterised the genes and pathways involved in the biosynthesis of major bioactive compounds, including alkaloids, flavonoids and isoflavonoids. The assembled genome provides valuable resources for conservation, genetic research and breeding of <em>S. flavescens</em>.
description: The draft genome assembly dataset for Sophora flavescens (Kushen), including: 1) Draft genome assembly: Sfla_v1.chromosomes.fa 2) Draft genome assembly with repeats soft-masked: Sfla_v1.repeat_EDTA.chromosomes_softMasked.fa 3) Gene annotation: Sfla_v1.cdna.gff3 4) Annotated protein sequences: Sfla_v1.proteins.fa 5) Annotated transcripts sequences: Sfla_v1.transcripts.fa 6) Repeat annotation: Sfla_v1.repeat_EDTA.gff3 7) Consensus repeat sequences: Sfla_v1.repeat_EDTA.lib 8) Expression matrix of transcripts (3 tissue, calculated and normalized using RSEM as Transcripts Per Million): Sfla_v1.transcripts.expression_matrix.RSEM_TPM.txt
DOI: 10.5285/c107618f1db34801bb88a1e927b82317
title: High-resolution daily global climate dataset of BCCAQ statistically downscaled CMIP6 models for the EVOFLOOD project

description: A novel statistical downscaling model, the Bias Correction Constructed Analogues with Quantile mapping reordering (BCCAQ), is used to downscale daily precipitation, air temperature, maximum and minimum temperature, wind speed, air pressure, and relative humidity from 18 global circulation models (GCMs) from the Coupled Model Intercomparison Project Phase 6 (CMIP6). This new high-resolution climate dataset will be useful in assessing future changes and variability in climate and in particular in driving richer impact assessment models. The data are available for the historical (1981-2014) and future (2015-2100) periods at 0.25 degree horizontal resolution and daily time step across three Shared Socioeconomic Pathways (SSP2-4.5, SSP5-3.4OS and SSP5-8.5). SSP2-4.5 is based on Shared Socioeconomic Pathway SSP2 with intermediate climate change mitigation and adaptation challenges and RCP2.6, a future pathway with a radiative forcing of 4.5 W/m2 in the year 2100. SSP5-8.5 is based on Shares Socioeconomic Pathway SSP5 where climate change mitigation challenges dominate and RCP8.5, a future pathway with a radiative forcing of 8.5 W/m2 in the year 2100. SSP5-3.4OS is an overshoot scenario where emissions follow the SSP5-8.5 pathway until 2040 before dramatically declining.
DOI: 10.5281/zenodo.10199794
title: An upper limit on the spins of merging binary black holes formed through binary evolution

description: Input files to reproduce simulations of the paper "An upper limit on the spins of merging binary black holes formed through binary evolution". Mesa version used was r23.05.01 with the MESA SDK x86_64-linux-22.6.1 for stripped star models and MESA version 11701 with MESA SDK x86_64-linux-20190503 for binary models (to reproduce old results). Files for MESA simulations are contained in the folder 'mesa_models', containing the following:

bin_models: Binary evolution models for a chemically homogeneous binary evolved with different models for angular momentum transport.

original: Original simulation from du Buisson et al. 2020 using the TS dynamo
TSF_Fuller_Lu2021: Same simulation but using the model for the TS dynamo of Fuller & Lu 2021
solid_body: Simulation done with solid body rotation
Z10Msun: stripped star models with metallicity Zsun/10. Each folder inside contains one model labeled by log10(M/Msun)
Z50Msun: stripped star models with metallicity Zsun/50. Each folder inside contains one model labeled by log10(M/Msun)
Z250Msun: stripped star models with metallicity Zsun/250. Each folder inside contains one model labeled by log10(M/Msun)
In addition, scripts to reproduce figures are included. These were done with julia version 1.9.2 and the Makie plotting package. A Manifest.toml and Project.toml are included to reproduce the environment used to produce the figures and analyze results. The included files are:

waveform.jl: Recalculates detection probabilities of du Buisson et al. 2020 including the effect of spin.
simplified_model.jl: Produces figures related to the semi-analytical model presented in the paper. Used for figures 1-4 of the paper
merger_rates.jl: Produces merger rate predictions. Used for figures 5-10 of the paper.
Extra folders included are:

ComputerModernFont: Fonts used for plotting
duBuisson_data: Original data from du Buisson et al. 2020. This includes both the outcomes of their mesa grids and their population synthesis calculations (see https://zenodo.org/records/3667546 for details).
sensitivity_curves: Sensitivity curves for GW detectors used to recompute detection probabilities