cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5726047
title: Characterizing the vulnerability of intertidal organisms in Olympic National Park to ocean acidification

description: Ocean acidification (OA) will have a predominately negative impact on marine animals sensitive to changes in carbonate chemistry. Coastal upwelling regions, such as the Northwest coast of North America, are likely among the first ecosystems to experience the effects of OA as these areas already experience high pH variability and naturally low pH extremes. Over the past decade, pH off the Olympic coast of Washington has declined an order of magnitude faster than predicted by accepted conservative climate change models. Resource managers are concerned about the potential loss of intertidal biodiversity likely to accompany OA, but as of yet, there are little pH sensitivity data available for the vast majority of taxa found on the Olympic coast. The intertidal zone of Olympic National Park is particularly understudied due to its remote wilderness setting, habitat complexity, and exceptional biodiversity. Recently developed methodological approaches address these challenges in determining organism vulnerability by utilizing experimental evidence and expert opinion. Here, we use such an approach to determine intertidal organism sensitivity to pH for over 700 marine invertebrate and algal species found on the Olympic coast. Our results reinforce OA vulnerability paradigms for intertidal taxa that build structures from calcium carbonate, but also introduce knowledge gaps for many understudied species. We furthermore use our assessment to identify how rocky intertidal communities at four long-term monitoring sites on the Olympic coast could be affected by OA given their community composition.
DOI: 10.6084/m9.figshare.5726047.v2
title: Characterizing the vulnerability of intertidal organisms in Olympic National Park to ocean acidification

description: Ocean acidification (OA) will have a predominately negative impact on marine animals sensitive to changes in carbonate chemistry. Coastal upwelling regions, such as the Northwest coast of North America, are likely among the first ecosystems to experience the effects of OA as these areas already experience high pH variability and naturally low pH extremes. Over the past decade, pH off the Olympic coast of Washington has declined an order of magnitude faster than predicted by accepted conservative climate change models. Resource managers are concerned about the potential loss of intertidal biodiversity likely to accompany OA, but as of yet, there are little pH sensitivity data available for the vast majority of taxa found on the Olympic coast. The intertidal zone of Olympic National Park is particularly understudied due to its remote wilderness setting, habitat complexity, and exceptional biodiversity. Recently developed methodological approaches address these challenges in determining organism vulnerability by utilizing experimental evidence and expert opinion. Here, we use such an approach to determine intertidal organism sensitivity to pH for over 700 marine invertebrate and algal species found on the Olympic coast. Our results reinforce OA vulnerability paradigms for intertidal taxa that build structures from calcium carbonate, but also introduce knowledge gaps for many understudied species. We furthermore use our assessment to identify how rocky intertidal communities at four long-term monitoring sites on the Olympic coast could be affected by OA given their community composition.
DOI: 10.6084/m9.figshare.5726047.v1
title: Characterizing the vulnerability of intertidal organisms in Olympic National Park to ocean acidification

description: Ocean acidification (OA) will have a predominately negative impact on marine animals sensitive to changes in carbonate chemistry. Coastal upwelling regions, such as the Northwest coast of North America, are likely among the first ecosystems to experience the effects of OA as these areas already experience high pH variability and naturally low pH extremes. Over the past decade, pH off the Olympic coast of Washington has declined an order of magnitude faster than predicted by accepted conservative climate change models. Resource managers are concerned about the potential loss of intertidal biodiversity likely to accompany OA, but as of yet, there are little pH sensitivity data available for the vast majority of taxa found on the Olympic coast. The intertidal zone of Olympic National Park is particularly understudied due to its remote wilderness setting, habitat complexity, and exceptional biodiversity. Recently developed methodological approaches address these challenges in determining organism vulnerability by utilizing experimental evidence and expert opinion. Here, we use such an approach to determine intertidal organism sensitivity to pH for over 700 marine invertebrate and algal species found on the Olympic coast. Our results reinforce OA vulnerability paradigms for intertidal taxa that build structures from calcium carbonate, but also introduce knowledge gaps for many understudied species. We furthermore use our assessment to identify how rocky intertidal communities at four long-term monitoring sites on the Olympic coast could be affected by OA given their community composition.
DOI: 10.17608/k6.auckland.5726023
title: FRP anchors on RC structural members database

description: Database of studies of FRP anchors in combination with EBR systems on reinforced concrete structures
DOI: 10.6084/m9.figshare.5726008
title: Cataloguing the new world: Colenso’s <i>Glossarium Botanicum: Novae Zelandiae</i>

description: The unpublished <i>Glossarium Botanicum: Novae Zelandiae</i>, begun in 1838 by William Colenso, is the oldest extant manuscript by a resident New Zealand botanist. It was begun at a time when the <i>Florae Insularum Novae Zelandiae Precursor</i> of Allan Cunningham was in the process of being published, and when Cunningham and Colenso were botanising together in Northland. This article discusses the relationships between Colenso’s and Cunningham’s works. It is argued that Colenso modelled the manuscript on a notebook which Cunningham had with him in 1838, adding more information in 1841 when he obtained a copy of Cunningham’s paper. Material from Colenso’s East Coast journey was added either in 1842 or possibly later. An appendix identifies previously unrecorded Colenso localities from the <i>Glossarium</i>. A second appendix identifies approximate dates for the various published papers resulting from his East Coast journey.
DOI: 10.6084/m9.figshare.5726008.v1
title: Cataloguing the new world: Colenso’s <i>Glossarium Botanicum: Novae Zelandiae</i>

description: The unpublished <i>Glossarium Botanicum: Novae Zelandiae</i>, begun in 1838 by William Colenso, is the oldest extant manuscript by a resident New Zealand botanist. It was begun at a time when the <i>Florae Insularum Novae Zelandiae Precursor</i> of Allan Cunningham was in the process of being published, and when Cunningham and Colenso were botanising together in Northland. This article discusses the relationships between Colenso’s and Cunningham’s works. It is argued that Colenso modelled the manuscript on a notebook which Cunningham had with him in 1838, adding more information in 1841 when he obtained a copy of Cunningham’s paper. Material from Colenso’s East Coast journey was added either in 1842 or possibly later. An appendix identifies previously unrecorded Colenso localities from the <i>Glossarium</i>. A second appendix identifies approximate dates for the various published papers resulting from his East Coast journey.
DOI: 10.6084/m9.figshare.5725993
title: Numerical Computation of Eigenvalues for a Linear Operator

description: An implementation of the shooting method is offered for an eigenvalue problem.The code is written in Python.
DOI: 10.6084/m9.figshare.5725987
title: ExcisionFinder Data

description: ExcisionFinder is a database and toolset for analysis and design of allele-specific CRISPR editing that leverages &gt;2,500 human genomes to estimate feasibility of allele-specific loci in varied individuals and design allele-specific sgRNAs in individual genomes.
DOI: 10.6084/m9.figshare.5725987.v2
title: ExcisionFinder Data

description: ExcisionFinder is a database and toolset for analysis and design of allele-specific CRISPR editing that leverages &gt;2,500 human genomes to estimate feasibility of allele-specific loci in varied individuals and design allele-specific sgRNAs in individual genomes.
DOI: 10.6084/m9.figshare.5725987.v1
title: ExcisionFinder Data

description: ExcisionFinder is a database and toolset for analysis and design of allele-specific CRISPR editing that leverages &gt;2,500 human genomes to estimate feasibility of allele-specific loci in varied individuals and design allele-specific sgRNAs in individual genomes.
DOI: 10.6084/m9.figshare.5725972
title: Timelapse 3 - raw confocal files 3

description: See accompanying word documents<br><br>
DOI: 10.6084/m9.figshare.5725969
title: Wind erosion simulation

description: Simulation of wind erosion in a rotating frame
DOI: 10.6084/m9.figshare.5725969.v1
title: Wind erosion simulation

description: Simulation of wind erosion in a rotating frame
DOI: 10.6084/m9.figshare.5725960
title: cell imaging ( live cell of fluorescence protein fused β-Actin, and fixed cell imaging of QD800 labeled α-tubulin)

description: This is experimental data sets of live cell imaging with fluorescence labeled actin.
DOI: 10.6084/m9.figshare.5725960.v1
title: cell imaging ( live cell of fluorescence protein fused β-Actin, and fixed cell imaging of QD800 labeled α-tubulin)

description: This is experimental data sets of live cell imaging with fluorescence labeled actin.
DOI: 10.17608/k6.auckland.5725942
title: Isolated FRP anchors database

description: Database of research on isolated FRP anchors on reinforced concrete structures
DOI: 10.17608/k6.auckland.5725942.v1
title: Isolated FRP anchors database

description: Reference workSpecimen nameMaterial (Carbon or Glass)Material strength (to calculate the 100% capacity when not given on the original reference)A dowel (net cross sectional area of the anchor dowel)Alpha (fanning angle)Beta (insertion angle)Npo Nfs Nfr (failure load)Npo Nfs and Nfr avge (the average failure load when more than one identical anchor were tested)Nsh (100% capacity of the sheets used to manufacture the anchors)Efficiency (the ratio between the failure load and the 100% capacity in %)Efficiency avge (the average efficiency when more than one identical anchor were tested)Slip control (the bond slip of the sheet without anchors)Slip sheet (the bond slip of the sheet when anchors are installed, before the sheet is totally debonded)Slip sheet + anchors (the total bond slip at peak failure when anchors are installed)Slip s+a avge (the average total bond slip when more than one identical anchor were tested)Slip a (the bond slip of the anchor when there was no sheet debond or subtracted from the sheet slip)slip a avge (the average anchor bond slip when more than one identical anchor were tested)
DOI: 10.6084/m9.figshare.5725921
title: Sustainable Agricultural Practices for Improving Soil Carbon and Nitrogen Content in Relation to Water Availability – An Adapted Approach to Mediterranean Olive Groves

description: A field experiment was conducted in an irrigated olive orchard to determine the effects of an orchard management system consisting of increased carbon input management on spatial distribution (tree inter-row/in-row, soil depth 0–10/10–20 cm) of nitrogen and carbon in the soil as well as on some microbial properties in relation to water availability. The experiment consisted of 12 blocks (each with 4 trees covering 200 m<sup>2</sup> of land), uniform olive tree canopy size and natural vegetation, used as replications (three per treatment) in a split plot design for the following four treatments: a) spreading of olive mill compost on the soil without soil tillage, b) spreading of chopped pruning residue on the soil without soil tillage, c) combination of b + c, and d) control which received no organic materials and soil was kept free of weeds with frequent tillage and herbicide sprays. Increased soil organic matter content (SOM) (up to +80%), NO<sub>3</sub> N (up to +194%), and NH<sub>4</sub> N (up to +37%) by carbon inputs were observed in soil layer 0–10 cm. Irrigation enhanced SOM, NH<sub>4</sub> N, and electrical conductivity (EC) while it favored NO<sub>3</sub> N increase by carbon inputs. All microbial properties (Soil Basal Microbial Respiration, Soil Microbial Biomass Carbon, and Metabolic quotient) were significantly higher at 0–10 cm in comparison to 10–20 cm depth. This study suggests good agricultural management practices for optimized soil organic carbon (SOC) storage adapted to the typical Mediterranean agroecosystems.
DOI: 10.6084/m9.figshare.5725921.v1
title: Sustainable Agricultural Practices for Improving Soil Carbon and Nitrogen Content in Relation to Water Availability – An Adapted Approach to Mediterranean Olive Groves

description: A field experiment was conducted in an irrigated olive orchard to determine the effects of an orchard management system consisting of increased carbon input management on spatial distribution (tree inter-row/in-row, soil depth 0–10/10–20 cm) of nitrogen and carbon in the soil as well as on some microbial properties in relation to water availability. The experiment consisted of 12 blocks (each with 4 trees covering 200 m<sup>2</sup> of land), uniform olive tree canopy size and natural vegetation, used as replications (three per treatment) in a split plot design for the following four treatments: a) spreading of olive mill compost on the soil without soil tillage, b) spreading of chopped pruning residue on the soil without soil tillage, c) combination of b + c, and d) control which received no organic materials and soil was kept free of weeds with frequent tillage and herbicide sprays. Increased soil organic matter content (SOM) (up to +80%), NO<sub>3</sub> N (up to +194%), and NH<sub>4</sub> N (up to +37%) by carbon inputs were observed in soil layer 0–10 cm. Irrigation enhanced SOM, NH<sub>4</sub> N, and electrical conductivity (EC) while it favored NO<sub>3</sub> N increase by carbon inputs. All microbial properties (Soil Basal Microbial Respiration, Soil Microbial Biomass Carbon, and Metabolic quotient) were significantly higher at 0–10 cm in comparison to 10–20 cm depth. This study suggests good agricultural management practices for optimized soil organic carbon (SOC) storage adapted to the typical Mediterranean agroecosystems.
DOI: 10.6084/m9.figshare.5725786
title: Musician mortality data and R code

description: MusicianData.RData musician data in R format containing:<br>a) data.frame as follows<br>- Person.num, Person ID number<br>- Band.num, Band ID number<br>- Date.of.birth, date of birth <br>- Date.of.number.one, Date of UK number one album (see: Wikipedia pages, e.g., http://en.wikipedia.org/wiki/List_of_number-one_albums_from_the_1970s_(UK))<br>- Date.of.death.censored, Date of death for those who died and censored data (August 2011) for those still alive<br>- Status, 1=dead, 0=alive<br>b) 'censor' giving the censoring date<br><br>LexisMusic.R R program to create the Lexis diagram (Figure 1 in the paper).<br><br>MusicianMVNA.R program to create the death rates and musicians at risk (Figure 2 in the paper)<br><br>Musician.csv data in csv format, see "MusicianData.RData" for an explanation of the variable names
DOI: 10.6084/m9.figshare.5725624
title: Nightjar diversity and microhabitat use in Nechisar National Park, Ethiopia

description: Knowledge of the distribution and ecology of East African nightjars is, to a large extent, unknown. We collected ecological information on the diversity and microhabitat use of nightjars in Nechisar National Park in January 2015 by executing field captures and observations. We also attempted to find a live specimen of the Nechisar Nightjar <i>Caprimulgus solala</i>. During the course of 18 nights we observed five nightjar species, captured 49 individuals and observed that nightjars were closely associated with protective landscape elements. In spite of the intensity of our survey, we were not able to find a living specimen of the Nechisar Nightjar, which could indicate the species is either migratory or extinct.
DOI: 10.6084/m9.figshare.5725624.v2
title: Nightjar diversity and microhabitat use in Nechisar National Park, Ethiopia

description: Knowledge of the distribution and ecology of East African nightjars is, to a large extent, unknown. We collected ecological information on the diversity and microhabitat use of nightjars in Nechisar National Park in January 2015 by executing field captures and observations. We also attempted to find a live specimen of the Nechisar Nightjar <i>Caprimulgus solala</i>. During the course of 18 nights we observed five nightjar species, captured 49 individuals and observed that nightjars were closely associated with protective landscape elements. In spite of the intensity of our survey, we were not able to find a living specimen of the Nechisar Nightjar, which could indicate the species is either migratory or extinct.
DOI: 10.6084/m9.figshare.5725624.v1
title: Nightjar diversity and microhabitat use in Nechisar National Park, Ethiopia

description: Knowledge of the distribution and ecology of East African nightjars is, to a large extent, unknown. We collected ecological information on the diversity and microhabitat use of nightjars in Nechisar National Park in January 2015 by executing field captures and observations. We also attempted to find a live specimen of the Nechisar Nightjar <i>Caprimulgus solala</i>. During the course of 18 nights we observed five nightjar species, captured 49 individuals and observed that nightjars were closely associated with protective landscape elements. In spite of the intensity of our survey, we were not able to find a living specimen of the Nechisar Nightjar, which could indicate the species is either migratory or extinct.
DOI: 10.6084/m9.figshare.5723200
title: Supplementary Fig. 5. Maximum likelihood phylogenetic tree of Exo70F family members from diverse Poales species

description: Multiple sequence alignment and phylogenetic analysis of the Exo70F gene family from the Poales. Particular interest is in identifying Exo70F1 orthologs. FASTA file is included for reference.<br>
DOI: 10.6084/m9.figshare.5723200.v1
title: Supplementary Fig. 5. Maximum likelihood phylogenetic tree of Exo70F family members from diverse Poales species

description: Multiple sequence alignment and phylogenetic analysis of the Exo70F gene family from the Poales. Particular interest is in identifying Exo70F1 orthologs. FASTA file is included for reference.<br>
DOI: 10.6084/m9.figshare.5723197
title: Supplementary Fig. 4. Maximum likelihood phylogenetic tree of RGH3 homologs across the Poaceae

description: Multiple sequence alignment and phylogenetic trees of full length and NB domains of RGH3 gene family from diverse Poaceae. FASTA files and clustering results are included.
DOI: 10.6084/m9.figshare.5723197.v1
title: Supplementary Fig. 4. Maximum likelihood phylogenetic tree of RGH3 homologs across the Poaceae

description: Multiple sequence alignment and phylogenetic trees of full length and NB domains of RGH3 gene family from diverse Poaceae. FASTA files and clustering results are included.
DOI: 10.6084/m9.figshare.5723191
title: Supplementary Fig. 3. Maximum likelihood phylogenetic tree and domain structure of RGH2 homologs across the Poaceae

description: Multiple sequence alignment and phylogenetic trees of full length and NB domains of RGH2 gene family from diverse Poaceae. FASTA files and clustering results are included.
DOI: 10.6084/m9.figshare.5723191.v1
title: Supplementary Fig. 3. Maximum likelihood phylogenetic tree and domain structure of RGH2 homologs across the Poaceae

description: Multiple sequence alignment and phylogenetic trees of full length and NB domains of RGH2 gene family from diverse Poaceae. FASTA files and clustering results are included.
DOI: 10.6084/m9.figshare.5723188
title: Supplementary Fig. 2. Maximum likelihood phylogenetic tree of RGH1 homologs across the Poaceae

description: Multiple sequence alignment and phylogenetic trees of full length and NB domains of RGH1 gene family from diverse Poaceae. FASTA files and clustering results are included.<br>
DOI: 10.6084/m9.figshare.5723188.v1
title: Supplementary Fig. 2. Maximum likelihood phylogenetic tree of RGH1 homologs across the Poaceae

description: Multiple sequence alignment and phylogenetic trees of full length and NB domains of RGH1 gene family from diverse Poaceae. FASTA files and clustering results are included.<br>
DOI: 10.6084/m9.figshare.5723179
title: Fig. 3. Exo70F1 integration in RGH2 occurred prior to the radiation of Poeae-Triticeae

description: Multiple sequence alignment and phylogenetic tree of integrated and non-integrated Exo70F1. The original FASTA file is included.<br>
DOI: 10.6084/m9.figshare.5723176
title: STOQS - Reasons to Use (Presented at the AGU Annual Conference 2017 Data Help Desk)

description: STOQS (Spatial Temporal Oceanographic Query System) is a geospatial database software package designed for providing efficient access to <i>in situ </i>oceanographic measurement data. This efficient data access capability enables development of advanced visualization and analysis tools. One of them in wide use is a web-based user interface that follows Ben Shneiderman’s mantra (Overview first, zoom and filter, then details-on-demand) for exploring collections of observational data.
DOI: 10.6084/m9.figshare.5723179.v1
title: Fig. 3. Exo70F1 integration in RGH2 occurred prior to the radiation of Poeae-Triticeae

description: Multiple sequence alignment and phylogenetic tree of integrated and non-integrated Exo70F1. The original FASTA file is included.<br>
DOI: 10.6084/m9.figshare.5723176.v1
title: STOQS - Reasons to Use (Presented at the AGU Annual Conference 2017 Data Help Desk)

description: STOQS (Spatial Temporal Oceanographic Query System) is a geospatial database software package designed for providing efficient access to <i>in situ </i>oceanographic measurement data. This efficient data access capability enables development of advanced visualization and analysis tools. One of them in wide use is a web-based user interface that follows Ben Shneiderman’s mantra (Overview first, zoom and filter, then details-on-demand) for exploring collections of observational data.
DOI: 10.6084/m9.figshare.5723170
title: Fig. 2. Exo70F1 is the donor of the Exo70 integration in RGH2

description: Multiple sequence alignments and phylogenetic trees based on protein for all and Exo70F gene families. FASTA files for all proteins used are included, as well as a definition file for gene family annotation.<br>
DOI: 10.17026/dans-xwz-28wc
title: Interviewcollectie Stichting Mondelinge Geschiedenis Indonesië, interview 1623

description: Dit interview bestaat uit twee gesprekken: 1623.1 en 1623.2.1623.1 De geïnterviewde vertelt over zijn jeugd in Indië. Hij groeide voor een deel op in een weeshuis te Semarang. De geïnterviewde vertelt hoe hij de Japanse bezettingstijd heeft ervaren. Hij werd op jonge leeftijd geconfronteerd met oorlog, ellende en gruwelijke strafmaatregelen van de Japanners. De zusters van meneer Wolff moesten zoveel mogelijk binnen blijven en hij moest zijn moeder steunen in haar handeltje buitenshuis. Hij bleef tijdens de bezetting buiten het kamp. Tot slot vertelt de geïnterviewde over de bersiaptijd en hoe hij eind 1945 met zijn familie door de Engelsen via Semarang naar Soerabaja werd geëvacueerd.1623.2 De geïnterviewde vertelt vier de periode na de evacuatie. Hij vertelt over de beschietingen en het bombardement in Ambarawa terwijl hij en zijn familie ter bescherming in het kamp fort Willem I waren gebracht.De geïnterviewde vertelt hoe hij zijn schooltijd weer hervatte en aan het werk ging. In 1961 vertrok de geïnterviewde uit eigen wil naar Nederland.
DOI: 10.34816/efa.archives.364273
title: Philippes-19476-TEMPLE EST TEMPLE PRONAOS ORTHOSTATE EN CALCAIRE

description: Référence : 19476<br />Publication(s) : Inédit<br />Domaine : Architecture<br />