cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25326/431
title: LIAISE_ELS-PLANS_UKMO_MTO-10MIN_L2

description: This dataset contains   

Vertical characteristics:  

Air temperature at 1.2m, 10m, 25m, 50m.    

Relative humidity at 1.2m, 10m, 25m, 50m.  

Absolute humidity at 2m, 10m (these ae uncalibrated measurements from the Licor and Krypton, respectively, and were used in calculating humidity fluxes only. Please use relative humidity and air temperature to calculate absolute humidity if required.)   

Wind speed, direction, gust strength and turbulence derived characteristics at 2m, 10m, 25m, 50m (measured with both north and south facing sonic anemometers.)  

Visibility at 2m,.  

Pressure at 2m.  

Upwards and downwards shortwave and longwave radiation at 2m  

Surface measurements:  

Tipping bucket rainfall.   

Infra-red surface temperatures taken at 2m (measured with both north and south facing thermometers.)  

Grass canopy temperature and relative humidity at 2 locations with slightly different characteristics and to ensure observation resilience.  

Subsurface characteristics:  

Soil temperatures at 1 cm, 4 cm, 10cm, 17cm, 35cm.  

Soil moisture at 2cm, 10cm, 20cm, 30cm, 40cm 

Soil heat flux taken at 2cm at 2 locations to examine heterogeneity and ensure observation resilience.  

The data is column oriented with quality flags preceding the data column.    

Quality flags: | = data OK, X = data flagged as bad, dummy value of 1x1011 applied, m = data missing, ? = possibly suspect data, do not use for bulk processing/statistics, c = calibration suspect, D = sonic orientation bad for wind direction – applied to data derived from sonic anemometers only and indicates that the wind and turbulence data for those times in particular may not be reliable.  

These measurements have been done at Els Plans, Spain (41.590111N, 1.029363 W, 334m)  

Altitude 334m  

Latitude 41.590111 

Longitude 1.029363
DOI: 10.25326/430
title: LIAISE_ELS-PLANS_UKMO_MTO-30MIN_L2

description: This dataset contains   

Vertical characteristics:  

Air temperature at 1.2m, 10m, 25m, 50m.    

Relative humidity at 1.2m, 10m, 25m, 50m.  

Absolute humidity at 2m, 10m (these ae uncalibrated measurements from the Licor and Krypton, respectively, and were used in calculating humidity fluxes only. Please use relative humidity and air temperature to calculate absolute humidity if required.)   

Wind speed, direction, gust strength and turbulence derived characteristics at 2m, 10m, 25m, 50m (measured with both north and south facing sonic anemometers.)  

Visibility at 2m,.  

Pressure at 2m.  

Upwards and downwards shortwave and longwave radiation at 2m  

Surface measurements:  

Tipping bucket rainfall.   

Infra-red surface temperatures taken at 2m (measured with both north and south facing thermometers.)  

Grass canopy temperature and relative humidity at 2 locations with slightly different characteristics and to ensure observation resilience.  

Subsurface characteristics:  

Soil temperatures at 1 cm, 4 cm, 10cm, 17cm, 35cm.  

Soil moisture at 2cm, 10cm, 20cm, 30cm, 40cm 

Soil heat flux taken at 2cm at 2 locations to examine heterogeneity and ensure observation resilience.  

The data is column oriented with quality flags preceding the data column.    

Quality flags: | = data OK, X = data flagged as bad, dummy value of 1x1011 applied, m = data missing, ? = possibly suspect data, do not use for bulk processing/statistics, c = calibration suspect, D = sonic orientation bad for wind direction – applied to data derived from sonic anemometers only and indicates that the wind and turbulence data for those times in particular may not be reliable.  

These measurements have been done at Els Plans, Spain (41.590111N, 1.029363 W, 334m)  

Altitude 334m  

Latitude 41.590111 

Longitude 1.029363
DOI: 10.17632/95dxgcstgn.1
title: Enhancing Estimation of Catchment Direct Runoff Using Inverse Modelling of SCS-CN: Case Studies across Iran

description: The file included 31,200 event-based precipitation-streamflow (P-Q) data in daily scale recorded in 304 watersheds across Iran used in the analyses.
DOI: 10.15468/dl.4tzm62
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.707998 -32.306351, 149.707998 -32.308596, 149.703506 -32.308596, 149.703506 -32.310842, 149.687786 -32.310842, 149.687786 -32.313088, 149.68554 -32.313088, 149.68554 -32.315334, 149.681048 -32.315334, 149.681048 -32.322071, 149.678803 -32.322071, 149.678803 -32.319825, 149.676557 -32.319825, 149.676557 -32.313088, 149.65859 -32.313088, 149.65859 -32.310842, 149.649607 -32.310842, 149.649607 -32.313088, 149.647361 -32.313088, 149.647361 -32.315334, 149.640624 -32.315334, 149.640624 -32.326563, 149.656345 -32.326563, 149.656345 -32.322071, 149.665328 -32.322071, 149.665328 -32.319825, 149.669819 -32.319825, 149.669819 -32.326563, 149.660836 -32.326563, 149.660836 -32.328809, 149.672065 -32.328809, 149.672065 -32.331054, 149.678803 -32.331054, 149.678803 -32.335546, 149.676557 -32.335546, 149.676557 -32.340038, 149.681048 -32.340038, 149.681048 -32.337792, 149.68554 -32.337792, 149.68554 -32.342283, 149.692277 -32.342283, 149.692277 -32.335546, 149.687786 -32.335546, 149.687786 -32.331054, 149.699015 -32.331054, 149.699015 -32.328809, 149.687786 -32.328809, 149.687786 -32.326563, 149.68554 -32.326563, 149.68554 -32.322071, 149.687786 -32.322071, 149.687786 -32.315334, 149.692277 -32.315334, 149.692277 -32.326563, 149.710244 -32.326563, 149.710244 -32.315334, 149.723719 -32.315334, 149.723719 -32.313088, 149.725964 -32.313088, 149.725964 -32.308596, 149.721473 -32.308596, 149.721473 -32.306351, 149.707998 -32.306351))"
 ]
}

 The dataset includes 26 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048192-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tbdu5u
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.237619 -35.960266, 147.237619 -35.964757, 147.246602 -35.964757, 147.246602 -35.960266, 147.237619 -35.960266))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048193-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/7vf6sg485x.1
title: GPR143 directs virus-induced cell vacuolation via MKK6-p38 pathway in teleost

description: Cytoplasmic vacuolization is a well-known morphological phenomenon observed in vertebrate cells after exposure to bacterial or viral pathogens. Studies on cytoplasmic vacuolization focused on its role in cell death and survival processes. However, little is known about the mechanism of cytoplasmic vacuolization formation. Nervous necrosis virus (NNV), a devastating and multispecies marine virus affecting multiple species, induces pronounced cytoplasmic vacuoles in brain during infection. G protein-coupled receptors (GPCRs) are critical in regulating autophagosomes and generating vacuolation. Here, we investigated the specific role of G protein-coupled receptor (GPR) 143 in mediating RGNNV-induced cellular vacuolation in the central nervous system of teleost. We observed that it enhanced red-spotted grouper NNV (RGNNV)-induced cytoplasmic vacuolation through intracellular binding to the RGNNV capsid protein. GPR143 significantly influenced the binding of autophagosomes and lysosomes. Further analysis revealed that RGNNV enhanced the interaction of GPR143 with MKK6, which phosphorylation of p38 mitogen-activated protein kinase. This phosphorylation subsequently activated the mTOR pathway, augmenting the binding of autophagosomes and lysosomes and resulting in cytoplasmic vacuolation. Finally, GPR143-mutant zebrafish demonstrated diminished brain vacuolation and reduced fry mortality. These findings suggest that RGNNV–GPR143 interaction activated the MKK6–p38–mTOR pathway, fostering autophagosome and lysosome binding that leads to cytoplasmic vacuolation. Targeting the GPR143-mediated pathway may provide a new therapeutic strategy for virus-induced cellular vacuolation.
DOI: 10.5281/zenodo.13208165
title: Accompaying scripts for Schleussner et al. Overconfidence in Climate Overshoot

description: This repository contains the scripts that accompany the paper

Schleussner, C.-F., Ganti, G, Lejeune, Q., Zhu, B., Pfleiderer, P., et al.,

Overconfidence in Climate Overshoot

 

Data and citations

The IPCC AR6 WG III scenario data that is used in this paper can be obtained from here. The data file should be placed in the data folder. Please cite the following:

 

Chapter 3 of the WG III contribution to the IPCC's 6th Assessment Report

Riahi, K. et al. Mitigation pathways compatible with long-term goals. in IPCC, 2022: Climate Change 2022: Mitigation of Climate Change. Contribution of Working Group III to the Sixth Assessment Report of the Intergovernmental Panel on Climate Change (eds. Shukla, P. R. et al.) (Cambridge University Press, 2022). doi:10.1017/9781009157926.005.

 

The AR6 scenario database hosted by IIASA

Byers, E. et al. AR6 Scenarios Database. (2022) doi:10.5281/zenodo.5886912.

 

You will need to place the folder fair_temperatures and the file tier1_emissions.csv from here in the data folder.

To reproduce figure 3, E5, E6: Please execute 301_NorESM2-LM_GFDL-ESM2M.ipynb using the provided data.

To reproduce figure E7, E8: Please download CMIP6 runs for the scenarios SSP119 and SSP534-over from https://esgf-data.dkrz.de/search/cmip6-dkrz/ and change paths in the scripts analysis/302_, analysis/303_ and analyis/304_ according to your download loactions.

 

Note

Please refer to the README.md document in the analysis folder for instructions on the individual analysis steps. It documents the content in each notebook.

 

Installation

The analyis has been performed in python and is documented in Jupyter Notebooks. A conda environment with the required dependencies has been created to facilitate installation. 

$ conda env create --file environment.yml

$ conda activate provide_perspective
DOI: 10.15468/dl.kpxcsc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.723719 -32.328809, 149.723719 -32.331054, 149.725964 -32.331054, 149.725964 -32.328809, 149.723719 -32.328809))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048195-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26494661
title: Electronic Supplementary Materials from Spectral Stability of traveling waves in a thin-layer two-fluid Couette flow

description: This provides code and data used in the main paper.
DOI: 10.6084/m9.figshare.26494661.v1
title: Electronic Supplementary Materials from Spectral Stability of traveling waves in a thin-layer two-fluid Couette flow

description: This provides code and data used in the main paper.
DOI: 10.15468/dl.jkmadn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((146.867062 -35.962511, 146.867062 -35.964757, 146.869308 -35.964757, 146.869308 -35.962511, 146.867062 -35.962511))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048196-240626123714530/datasets/export for details.
DOI: 10.17632/2536bhwx7g.1
title: GI Tools SPIRIT Checklist

description: SPIRIT Checklist for the GI Tools protocol paper.
DOI: 10.17632/mrpw4tt7x9.1
title: RTEL1 helicase counteracts RAD51-mediated homologous recombination and fork reversal to safeguard replicating genomes Dixit et al.

description: Uncropped blots and microscopy images
DOI: 10.6084/m9.figshare.26494612
title: Dataset_obstetric_ultrasound_MG_2017-2020.xlsx

description: <b>Title: Proportion of foetal and placental abnormalities in Madagascar: a cross-sectional study of 35,919 women at public-sector primary healthcare facilities in central and southern Madagascar, 2017-2020</b><br><br>ABSTRACTBackgroundLike other countries in sub-Saharan Africa, Madagascar has a high burden of maternal and neonatal mortality. However, as the proportion of foetal and placental abnormalities among the Malagasy population is unknown, strategies aimed at reducing maternal and neonatal mortality are challenging to define and implement.MethodsWe conducted a multi-year, cross-sectional study using secondary NGO data on obstetric ultrasound, including patient records of all pregnant women who received an obstetric ultrasound screening between July 1st, 2017, and September 30th, 2020, at 62 public-sector primary care facilities in urban and rural regions of Madagascar. We analysed demographic characteristics and determined the prevalence of foetal and placental abnormalities.ResultsThe dataset included 38,688 ultrasound screening reports from 35,919 women, where 2,587/35,919 (7.20%) women had more than one ultrasound exam. Most women (68.63%, 26,550/38,688) received their first ultrasound during the third trimester of pregnancy. Foetal malpresentation at 36 weeks of gestation or later was diagnosed in 5.48% (176/3,211) of women with the breech presentation being most common (breech 3.99%, 128/3,211; transverse 0.84%, 27/3,211; mobile 0.5%, 16/3,211; oblique 0.16%, 5/3,211). Placenta previa was found in 2.31% (875/38,755) and multiple gestations in 1.03% (370/35,919) cases. Around one in every 150 women (0.66%, 234/38,702) had amniotic fluid disorders.<br><b>Conclusion</b>The proportion of foetal and placental abnormalities detected by obstetric ultrasound is consistent with findings from other countries in sub-Saharan Africa. In contrast to current WHO recommendations, pregnant women, particularly those from rural, resource-constrained settings attend obstetric ultrasound screenings most commonly during their third trimester of pregnancy
DOI: 10.6084/m9.figshare.26403754.v2
title: Late Paleozoic Tectonic Evolution of the North Tianshan (NW China): Insights from an Inverted HT-LP Metamorphic Sequence in the Harlik Range

description: Dataset for "Late Paleozoic Tectonic Evolution of the North Tianshan (NW China): Insights from an Inverted HT-LP Metamorphic Sequence in the Harlik Range" by Ni et al.
DOI: 10.15468/dl.p6utnv
title: Occurrence Download

description: A dataset containing 4320 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.732702 -32.315334, 149.732702 -32.319825, 149.725964 -32.319825, 149.725964 -32.326563, 149.732702 -32.326563, 149.732702 -32.331054, 149.730456 -32.331054, 149.730456 -32.335546, 149.725964 -32.335546, 149.725964 -32.346775, 149.730456 -32.346775, 149.730456 -32.351267, 149.732702 -32.351267, 149.732702 -32.346775, 149.734948 -32.346775, 149.734948 -32.344529, 149.748422 -32.344529, 149.748422 -32.331054, 149.750668 -32.331054, 149.750668 -32.328809, 149.748422 -32.328809, 149.748422 -32.319825, 149.746177 -32.319825, 149.746177 -32.315334, 149.732702 -32.315334))"
 ]
}

 The dataset includes 4320 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048197-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/2v76xj43fr.1
title: Promoting Social Housing in Paris, dataset and codes

description: These files contain the main data and codes to replicate several results presented by Belloy and Candau (2024) that analyzes the impact of compensation laws in Paris that aim to foster the redevelopment of empty offices and commercial units into social housing. We find that these laws have been quite ineffective in fostering social housing and social diversity at the district level (IRIS) in Paris. See the article "Promoting Social Housing : Insights from Redevelopment Policies in Paris" for data description and discussions on the estimator used (Synthetic Difference in differences and Difference in Discontinuity).
DOI: 10.17632/ndmf82j8sr.1
title: Groundwater data for GCA journal 202408

description: Research data for GCA journal, not for commercial
DOI: 10.15468/dl.8q7ehs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.531819 -35.962511, 147.531819 -35.964757, 147.534065 -35.964757, 147.534065 -35.962511, 147.531819 -35.962511))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048198-240626123714530/datasets/export for details.
DOI: 10.17632/9df2g93v9b.1
title: Dados coletados acerca da percepção do clima ético entre os profissionais de saúde

description: Dados coletados acerca da percepção do clima ético entre os profissionais de saúde.
DOI: 10.17632/5m8yz284y2.1
title: KIF5A regulates axonal repair and time-dependent axonal transport of SFPQ granules and mitochondria in human motor neurons.

description: Uncroppeb western blot and agarose gels
DOI: 10.17632/kxd9nvcthz.1
title: Data from "Assessing a Fuel Subsidy: Dynamic Effects on Retailer Pricing and Pass-Through to Consumers"

description: The data used in "Assessing a Fuel Subsidy: Dynamic Effects on Retailer Pricing and Pass-Through to Consumers" by J. Balaguer and J. Ripollés.
DOI: 10.17632/kxd9nvcthz.2
title: Data from "Assessing a Fuel Subsidy: Dynamic Effects on Retailer Pricing and Pass-Through to Consumers"

description: The data used in "Assessing a Fuel Subsidy: Dynamic Effects on Retailer Pricing and Pass-Through to Consumers" by J. Balaguer and J. Ripollés.
DOI: 10.17632/dx5rkyxzw3.1
title: Research data for Design Thinking Cultivating Decision Making ability among management students

description: The shows data of Quantitative Research where students were involved in the study comprises of management students from various colleges in India. These students were selected by purposive sampling through the authors professional networking. The participants were requested to fill the e-questionnaire pertaining to inculcation of decision-making skills, through design thinking. The test was based on self-report technique & the participants were assured of anonymity. The inculcation of decision-making ability among the management students through design thinking, was measured by a standardized decision-making attainment scale, which is the self-administered scale wherein the subject is instructed to put tick mark under any one of the given 4 alternatives – “Agree”, “Strongly Agree”, “Disagree” or “Strongly Disagree”. The test consists of 25 statements trying to measure varied aspects of inculcation of problem solving. The total time taken to complete the test is around 10 minutes. Also, there were certain questions that were with 2 alternative – “Yes” or “No”. The file shows responses of students, using likert scale data and paired sample t test were used, to prove the hypothesis. The author conducted a discussion with a set of students and interviews were lined up. E-Questionnaires were accessed by these students and they answered the questions. Using the responses obtained by investigating the proposed hypotheses:
Hypothesis 1: Design thinking process inculcates decision making skill among the management students, apart from using the traditional analytical skills.
DOI: 10.15468/dl.rf49bv
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.665328 -32.337792, 149.665328 -32.342283, 149.660836 -32.342283, 149.660836 -32.344529, 149.656345 -32.344529, 149.656345 -32.342283, 149.654099 -32.342283, 149.654099 -32.344529, 149.649607 -32.344529, 149.649607 -32.342283, 149.64287 -32.342283, 149.64287 -32.351267, 149.647361 -32.351267, 149.647361 -32.353512, 149.649607 -32.353512, 149.649607 -32.358004, 149.654099 -32.358004, 149.654099 -32.353512, 149.660836 -32.353512, 149.660836 -32.355758, 149.663082 -32.355758, 149.663082 -32.351267, 149.667574 -32.351267, 149.667574 -32.346775, 149.672065 -32.346775, 149.672065 -32.337792, 149.665328 -32.337792))"
 ]
}

 The dataset includes 45 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048200-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.4266426
title: Performance simulation of short term alternative refrigerants for innovative hybrid high temperature heat pump

description: This dataset is generated by CNR-ITC in order to simulate and compare the thermodynamic performance of short-term alternative refrigerants in HP cycles at various operating conditions. The purpose of this dataset within the project is to select the most promising fluid in an innovative hybrid high temperature HP developed by HIREF. The generated data are thermodynamic properties and performance (COP, VRE) values from simulation of thermodynamic HP cycles with home made software developed in Matlab environment.
DOI: 10.5281/zenodo.3589102
title: OSMO soil health dataset 2015-2018

description: This is soil health data collected from 24 Finnish fields between 2015-2018. The fields were chosen to represent fields with poor and good productivity on a given farm. The dataset is coded based on farm code (two letters) and field code: 0 poor field, no interventions; 1 poor field, improved soil management; K good field. Fields were monitored for soil nutrients, soil physical quality and some biological parameters (aggregate stability, earthworms, arthropods, soil carbon dioxide burst respiration). The overview dataset contains the parameters used for monitoring development in soil health in the fields, the additional dataset present plant tissue nutrient concentrations and soil structure evaluation as well as a comparison of organic matter analysis from three laboratories and a comparison of two aggregate stability assessment methods. More information on the study can be found in the two reports (in Finnish, w. English abstracts): http://hdl.handle.net/10138/229450 http://hdl.handle.net/10138/309062
description: Further information can be obtained from the main author: tuomas.mattila@ymparisto.fi
description: {"references": ["Mattila, T.J., Rajala, J. Is it possible to improve soil health? University of Helsinki, Ruralia Institute, Reports 200. http://hdl.handle.net/10138/309062"]}
DOI: 10.5281/zenodo.5797094
title: Grape Data Exemplars

description: Commonly referenced set of datasets.
DOI: 10.5281/zenodo.6907744
title: 100 geolocated oil spills in the Gulf of Guinea

description: Shapefile containing 100 geolocated oil spills in the Gulf of Guinea and including oil spill from ship and oil spill from platform
DOI: 10.15468/dl.3n84uj
title: Occurrence Download

description: A dataset containing 173 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.639617 -35.955774, 147.639617 -35.95802, 147.637371 -35.95802, 147.637371 -35.962511, 147.63288 -35.962511, 147.63288 -35.964757, 147.637371 -35.964757, 147.637371 -35.969249, 147.639617 -35.969249, 147.639617 -35.964757, 147.644109 -35.964757, 147.644109 -35.955774, 147.639617 -35.955774))"
 ]
}

 The dataset includes 173 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048201-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.