cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3613760_d7.v1
title: MOESM10 of RNA-seq analysis of Pichia anomala reveals important mechanisms required for survival at low
            pH

description: Additional file 10: Table S4. Components of the respiratory chain in P. anomala that have homologs in S. cerevisiae obtained from a protein BLAST.
DOI: 10.6084/m9.figshare.c.3613760_d6.v1
title: MOESM3 of RNA-seq analysis of Pichia anomala reveals important mechanisms required for survival at low
            pH

description: Additional file 3: Table S1. Comparison of the three de novo assemblers used in this study.
DOI: 10.17863/cam.100540
title: Research Data supporting "Helicity-dependent Ultrafast Photocurrents in Weyl Magnet Mn3Sn"

description: This represents the data set for the figures shown on the article “Helicity-dependent Ultrafast Photocurrents in Weyl Magnet Mn3Sn”, published on arXiv:2302.07286. Fig.1b – Amplitude of the detected THz signal polarised along y, i.e. perpendicular to the direction of the magnetic field. For these measurements Mn3Sn was optically pumped with laser pulses of different polarisations. The folder Fig.1(b) contains the raw data, obtained as averaging of several measurements, from which the amplitude is extracted, and for the different polarisations of the pump. Fig.2a-d – Amplitude of the emitted THz signal in different experimental configurations as described in Fig. 1(a) of the article and for different polarisations of the pump. Each of the folders Fig.2(a), Fig.2(b), Fig.2(c) and Fig.2(d) contains a sub-folder named “THz transients” where the raw transients from which the amplitude is extracted is shown. The details of the experiment in which each set of data was collected are described below: Fig.2a – measurements were taken in configuration 2 with a tilting angle of 25 deg., at room temperature and with no magnetic field applied. Fig.2b – measurements were taken in configuration 3 with a tilting angle of 15 deg., at room temperature and with no magnetic field applied. Fig.2c – measurements were taken in configuration 3 with a tilting angle of 15 deg. And 30 deg., at room temperature and with no magnetic field applied. Fig.2d – measurements were taken in configuration 3 with a tilting angle of 15 deg. And -15 deg., at room temperature and with no magnetic field applied. Fig.3a - THz signals amplitude measured at 380 K in configuration 3 and for different pump polarisations after field-cooling from 420 K with opposite directions of external magnetic field continuously applied along x. The raw data of the THz transient from which the amplitude was extracted is shown in the sub-folder “THz transients” in the folder “Fig.3(a)”. Fig.3b – Amplitude of the THz transient in configuration 3 for different pump polarisations before and after an in-plane rotation of the film by 90◦ . Prior to the measurements the sample was cooled down from 420 K to room temperature with a magnetic field of +860mT applied. The field was switched off at room temperature before measuring the THz transient. The raw data of the THz transient from which the amplitude was extracted is shown in the sub-folder “THz transients” in the folder “Fig.3(b)”.
DOI: 10.57702/vx1t0x3i
title: PhysioNet/CinC 2020 Challenge

description: The PhysioNet/CinC 2020 Challenge dataset contains 12-lead electrocardiogram (ECG) records for classification of 27 heart conditions.
DOI: 10.57702/ctez6k8w
title: PhysioNet/CinC 2020 Challenge dataset

description: The dataset used in the PhysioNet/CinC 2020 Challenge contains 43,101 ECG records.
DOI: 10.57702/9am8buow
title: Segmentation labels and radiomic features for the pre-operative scans of the TCGA-LGG collection

description: The dataset contains pre-operative scans of the TCGA-LGG collection.
DOI: 10.57702/dj0ph955
title: Yelp-Health

description: The Yelp-Health dataset used in the paper to demonstrate the leakage of dataset properties in multi-party machine learning.
DOI: 10.57702/s64w900v
title: Performance of the measurement-based adaptation protocol for the coherent state case

description: A dataset of 2000 initial random states for the coherent state case, with mean fidelity for 2000 initial random states, and evolution of ∆ in each iteration.
DOI: 10.57702/ronkwmeu
title: Performance of the measurement-based adaptation protocol for the cat state case

description: A dataset of 2000 initial random states for the cat state case, with mean fidelity for 2000 initial random states, and evolution of ∆ in each iteration.
DOI: 10.6084/m9.figshare.c.3612191_d4.v1
title: Additional file 2: of Identification of potential mutations and genomic alterations in the epithelial and spindle cell components of biphasic synovial sarcomas using a human exome SNP chip

description: Enrichment analysis of the Pathway Commons Pathway of differentiated genes. (HTML 20Â kb)
DOI: 10.57702/zvm6xnt7
title: KITTI-C

description: The KITTI-C dataset is a robustness benchmark for outdoor monocular depth estimation under data corruptions.
DOI: 10.6084/m9.figshare.c.3612191_d3.v1
title: Additional file 1: of Identification of potential mutations and genomic alterations in the epithelial and spindle cell components of biphasic synovial sarcomas using a human exome SNP chip

description: The summary of 336 differentiated data of SNP. (XLSX 91Â kb)
DOI: 10.6084/m9.figshare.c.3612191_d2.v1
title: Additional file 4: of Identification of potential mutations and genomic alterations in the epithelial and spindle cell components of biphasic synovial sarcomas using a human exome SNP chip

description: Enrichment analysis of the KEGG Pathway of differentiated genes. (HTML 26Â kb)
DOI: 10.57702/7amn3f9f
title: DSBI: Double-Sided Braille Image Dataset and Algorithm Evaluation for Braille Dots Detection

description: A large-scale Double-Sided Braille Image dataset DSBI with detailed Braille recto dots, verso dots and Braille cells annotation.
DOI: 10.6084/m9.figshare.c.3612191_d1.v1
title: Additional file 3: of Identification of potential mutations and genomic alterations in the epithelial and spindle cell components of biphasic synovial sarcomas using a human exome SNP chip

description: Enrichment analysis of the Wikipathways Pathway of differentiated genes. (HTML 24Â kb)
DOI: 10.6084/m9.figshare.c.3612134_d9.v1
title: MOESM2 of Oestrogen receptor β regulates epigenetic patterns at specific genomic loci through interaction with thymine DNA glycosylase

description: Additional file 2. Genes differently expressed in wt and βerko MEFs. List of genes that show changed expression in βerko compared to wt MEFs assessed by microarray gene expression analyses using the Affymetrix® Mouse Gene 1.1. ST platform. The list includes fold change, p value, chromosomal location, gene name and annotation.
DOI: 10.57702/ceqyw29z
title: LIVE-VQA

description: The LIVE-VQA dataset is a video quality assessment dataset, consisting of 1,000 video sequences with accompanying MOS values.
DOI: 10.6084/m9.figshare.c.3612134_d7.v1
title: MOESM6 of Oestrogen receptor β regulates epigenetic patterns at specific genomic loci through interaction with thymine DNA glycosylase

description: Additional file 6. Links to enriched transcription factor motifs identified using Haystack software.
DOI: 10.6084/m9.figshare.c.3612158_d1.v1
title: Additional file 2 of Analyzing Th17 cell differentiation dynamics using a novel integrative modeling framework for time-course RNA sequencing data

description: Mathematical model encoded in SBML. (XML 28 kb)
DOI: 10.6084/m9.figshare.c.3612134_d5.v1
title: MOESM4 of Oestrogen receptor β regulates epigenetic patterns at specific genomic loci through interaction with thymine DNA glycosylase

description: Additional file 4. Genomic location of the identified EREs.
DOI: 10.6084/m9.figshare.c.3612140_d3.v1
title: Additional file 1: Table S1. of Multi-layered Gag-specific immunodominant responses contribute to improved viral control in the CRF01_AE subtype of HIV-1-infected MSM subjects

description: Peptide matrix setup for Gag, Pol and Nef. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3612134_d4.v1
title: MOESM5 of Oestrogen receptor β regulates epigenetic patterns at specific genomic loci through interaction with thymine DNA glycosylase

description: Additional file 5. Links to enriched transcription factor motifs identified using Haystack software.
DOI: 10.6084/m9.figshare.c.3612119_d6.v1
title: Additional file 3: Table S3. of Transcriptomic analysis of mouse liver reveals a potential hepato-enteric pathogenic mechanism in acute Toxoplasma gondii infection

description: Differentially expressed molecular functions. (XLSX 37Â kb)
DOI: 10.57702/kvnobzaf
title: Noisy MNIST

description: The MNIST environment does not elicit any actions from an agent. Instead, the prediction network simply needs to learn one step mappings between pairs of MNIST handwritten digits.
DOI: 10.6084/m9.figshare.c.3612134_d2.v1
title: MOESM3 of Oestrogen receptor β regulates epigenetic patterns at specific genomic loci through interaction with thymine DNA glycosylase

description: Additional file 3. Genes differently expressed in βerko and βerkohERβ MEFs. List of genes that show changed expression in βerkohERβ compared to βerko MEFs assessed by microarray gene expression analyses using the Affymetrix® Mouse Gene 1.1. ST platform. The list includes fold change, p value, chromosomal location, gene name and annotation.
DOI: 10.6084/m9.figshare.c.3612119_d4.v1
title: Additional file 6: Table S6. of Transcriptomic analysis of mouse liver reveals a potential hepato-enteric pathogenic mechanism in acute Toxoplasma gondii infection

description: Relationship between differentially expressed genes and liver diseases. (XLSX 44Â kb)
DOI: 10.57702/1ndmfk6m
title: Bank Heist

description: The Bank Heist environment is a 2D maze with four rooms, where the objective is to navigate to banks distributed across the four mazes.
DOI: 10.6084/m9.figshare.c.3612140_d1.v1
title: Additional file 2: Table S2. of Multi-layered Gag-specific immunodominant responses contribute to improved viral control in the CRF01_AE subtype of HIV-1-infected MSM subjects

description: Sequences, position and HLA restriction of optimal epitopes used in this study. (XLSX 24 kb)
DOI: 10.57702/kqbxn4h0
title: Green chatbot 2.0

description: The dataset contains the results of two experimental studies examining the impact of 'Motivational Interviewing' and 'Directing Style' on discussions about Sustainable Development Goals.
DOI: 10.57702/ctrkoh1k
title: Database1

description: The dataset is a collection of 3600 genuine signatures and 2400 forged signatures.
DOI: 10.6084/m9.figshare.c.3610625_d4.v1
title: Additional file 3: Table S2B. of MicroRNA-21 regulates prostaglandin E2 signaling pathway by targeting 15-hydroxyprostaglandin dehydrogenase in tongue squamous cell carcinoma

description: Candidate microRNA-mRNA regulatory module defined by microRNA down-regulation and mRNA up-regulation. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3610631_d1.v1
title: Additional file 2 of Determining breast cancer histological grade from RNA-sequencing data

description: Includes lists of genes and coefficients of each model. (XLSX 1361 kb)
DOI: 10.17863/cam.64394
title: Research data supporting "Genetic analysis of dynein function in the nervous system and in mitosis"

description: This dataset supports the data included in the results chapters of the thesis "Genetic analysis of dynein function in the nervous system and in mitosis". Detailed methodological information is provided in “Chapter 2: Materials and methods” of the thesis. The dataset contains: (1) sixteen movies acquired using an Olympus IX71 inverted microscope with a PerkinElmer UltraVIEW ERS spinning disk system equipped with an Orca Hamamatsu Charge-coupled device (CCD) camera. Movies were acquired with a 60x/1.4 NA PlanApo oil-immersion objective (for movies 3.5) or a 60x/1.2 NA water-immersion objective (for the rest of the movies). Pixel size is 0.11 µm. Image series were processed using Fiji (https://imagej.net/Fiji) or ImageJ (https://imagej.nih.gov/ij/). See “Appendix A” of the thesis for frame rates and information on fluorescence channels for each individual movie. (2) Four Excel spreadsheets with data of identified proteins and unique peptide counts acquired after mass spectrometry of pull-down experiments. Data was visualised using Scaffold 4 (Proteome Software), and exported to Microsoft Excel. See “Appendix A” and “Chapter 5” of the thesis for details on starting material and pull-down methods used in each experiment.
DOI: 10.6084/m9.figshare.c.3610625_d2.v1
title: Additional file 2: Table S2A. of MicroRNA-21 regulates prostaglandin E2 signaling pathway by targeting 15-hydroxyprostaglandin dehydrogenase in tongue squamous cell carcinoma

description: Candidate microRNA-mRNA regulatory module defined by microRNA up-regulation and mRNA down-regulation. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3610625_d1.v1
title: Additional file 4: Table S3. of MicroRNA-21 regulates prostaglandin E2 signaling pathway by targeting 15-hydroxyprostaglandin dehydrogenase in tongue squamous cell carcinoma

description: Validation of the differential expression of microRNAs and mRNAs involved in putative MRM using TCGA dataset. (XLSX 12 kb)
DOI: 10.17863/cam.68802
title: Sequence learning recodes cortical representations instead of strengthening initial ones: fMRI data

description: fMRI data from participants performing a visual sequence recall task. The data is in BIDS 1.0.1 format but each participant's data is compressed into a single archive following a 'sub-*id*.tar.gz' pattern. For each participant there are three sub-folders: (1) 'anat' -- T1-weighted anatomical image. (2) 'func' -- (a) EPI BOLD images (multiband factor 2), (b) event timings data for contrast regressors (.tsv files). (3) 'fmap' -- EPI images in opposite phase-encoding direction to 'func' images to derive inhomogeneity field maps. For full details on the file formats included see the BIDS specification at https://bids-specification.readthedocs.io/en/stable/ The MRI data has been fully anonymised: all information linking the participants to the MRI scans has been removed. This included 'de-facing' where all facial features are removed from the images to ensure a greater degree of anonymity for data sharing purposes. De-facing was performed with 'pydeface' package (https://github.com/poldracklab/pydeface). The data was acquired at the Medical Research Council Cognition and Brain Sciences Unit (Cambridge, UK) on a 3T Siemens Prisma MRI scanner using a 32-channel head coil and simultaneous multi-slice data acquisition. Functional images were collected using 32 slices covering the whole brain (slice thickness 2 mm, in-plane resolution 2×2 mm) with acquisition time of 1.206 seconds, echo time of 30ms, and flip angle of 74 degrees. Each participant performed two scanning runs and 510 scans were acquired per run. The initial ten volumes from the run were discarded to allow for T1 equilibration effects. Stimulus presentation was controlled by PsychToolbox software: the trials were rear projected onto a translucent screen outside the bore of the magnet and viewed via a mirror system attached to the head coil. For full details of acquisition see 'Sequence learning recodes cortical representations instead of strengthening initial ones' by Kalm K, Norris D. PLOS Computational Biology, 2021. Analysis scripts for the data are available at: https://gitlab.com/kristjankalm/fmri_seq_ltm
DOI: 10.57702/wkv72dz7
title: Facility Location

description: The dataset used in this paper is a collection of facility location problems with polyhedral uncertainty sets.
DOI: 10.6084/m9.figshare.c.3610565_d3.v1
title: Additional file 3: Table S3. of Molecular detection and characterization of Babesia bovis, Babesia bigemina, Theileria species and Anaplasma marginale isolated from cattle in Kenya

description: Nucleotide alignment of partial sequences of T. parva p104 gene. This table presents a multi-sequence alignment of T. parva p104 sequences which compares the sequences obtained in this study to those previously published. (XLSX 28 kb)
DOI: 10.6084/m9.figshare.c.3610580_d1.v1
title: Additional file 1: of Smaller gray matter volume of hippocampus/parahippocampus in elderly people with subthreshold depression: a cross-sectional study

description: STROBE Statementâ  Checklist of items that should be included for cross-sectional studies (XLSX 14Â kb)
DOI: 10.17863/cam.50423
title: Downloads of research data EMP STATUS TOTAL BY SEX for BURGHS in Scotland 1851-1901 supporting “WP 26: Supplement to BBCE User Guide: Website definitions, downloads, Atlas of Entrepreneurship, and linkage to I-CeM”

description: BBCE data for entrepreneurs for Burghs in Scotland 1851-1901. Detailed definitions and method given in WP 6. The downloads include the total population (from census publications), and the total number of the economically active population from the BBCE broken down by sex, for employers, own-account proprietors, and workers. All data are weighted for census non-response bias in 1891-1901.
DOI: 10.57702/wswzlyy0
title: LPFF: A Portrait Dataset for Face Generators Across Large Poses

description: A large-pose Flickr face dataset comprised of 19,590 high-quality real large-pose portrait images.
DOI: 10.17863/cam.9203
title: Data supporting "The influence of surfaces on the transient terahertz conductivity and electron mobility of GaAs nanowires"

description: Photoconductivity data obtained by optical pump-terahertz probe spectroscopy
DOI: 10.57702/ygzx84wa
title: Graph-based Active Learning

description: The dataset used in the paper is a graph-based active learning problem, where the goal is to achieve a low error rate while querying as few nodes as possible.
DOI: 10.57702/9ehgspl2
title: Deformed Implicit Field

description: Deformed Implicit Field (DIF) representation for modeling 3D shapes of a category and generating dense correspondences among shapes.
DOI: 10.6084/m9.figshare.c.3608393_d5.v1
title: Additional file 11: of Identification of apoptosis-related microRNAs and their target genes in myocardial infarction post-transplantation with skeletal myoblasts

description: Table S8. Primary data of miRNA-predicted target arrays in rat hart simples.
DOI: 10.17863/cam.96533
title: Research data supporting 'Reversible spin-optical interface in luminescent organic radicals'

description: Contains data from optical spectroscopy, electron spin resonance, optically detected magnetic resonance, and theoretical calculations.
DOI: 10.6084/m9.figshare.c.3608393_d4.v1
title: Additional file 10: of Identification of apoptosis-related microRNAs and their target genes in myocardial infarction post-transplantation with skeletal myoblasts

description: Table S7. Genes involved in positive regulation of cell death, response to hypoxia, and negative regulation of apoptotic process.
DOI: 10.57702/f2zan8sf
title: Piece-wise Smooth Flow Model

description: Piece-wise Smooth Flow model and its validation in virtual world.
DOI: 10.17863/cam.46224
title: Research data supporting "Layer-by-layer growth of complex-shaped three-dimensional nanostructures with focused electron beams"

description: The files were created using the implementation of the algorithm described in the associated paper. The software can be accessed subject to collaboration.The first part of the name specifies which figure in the paper the file was used for.
DOI: 10.57702/ioirevba
title: Fake News Challenge Stage 1 (FNC-1)

description: The FNC-1 dataset is a supervised classification task for stance detection, where the goal is to automatically predict the labels in a supervised classification task.
DOI: 10.6084/m9.figshare.c.3608351_d1.v1
title: Additional file 1: Table S1. of Predicting gene targets from integrative analyses of summary data from GWAS and eQTL studies for 28 human complex traits

description: GWAS information. Table S2. SMR results (P SMR &lt;8.4 × 10–6). Table S3. SMR and HEIDI results (P HEIDI ≥0.05). Table S4. Novel genes. Table S5. Genes across more than one trait. Table S6. IBD, CD, and UC gene associations. Table S7. HDL, LDL, and TC gene associations. (XLSX 141 kb)
DOI: 10.6084/m9.figshare.c.3608306_d2.v1
title: Additional file 4: Table S2. of Primary myeloma interaction and growth in coculture with healthy donor hematopoietic bone marrow

description: Signal intensity of peptides detected by proteomics in NBM/MM coculture or MM or BM culture supernatants (nâ  =â  3). List ordered by highest to the lowest detection in coculture (NBM/MM) compared to MM or BM. (XLSX 21Â kb)
DOI: 10.57702/z2362j3z
title: ADNet: A Deep Network for Detecting Adverts

description: A composite dataset consisting of positive- and negative- examples of billboard detection.
DOI: 10.6084/m9.figshare.c.3608306_d1.v1
title: Additional file 2: Table S1. of Primary myeloma interaction and growth in coculture with healthy donor hematopoietic bone marrow

description: List of patient myeloma samples with detailed myeloma parameters. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3608309_d1.v1
title: Additional file 1: Table S1. of The forgotten guidelines: cross-sectional analysis of participation in muscle strengthening and balance & co-ordination activities by adults and older adults in Scotland

description: The results from multiple logistic regression investigating the effect of age group, gender, and their interaction on participation levels of muscle strengthening (weighted n = 6873 men, 7459 women). Table S2: The results from simple logistic regression investigating the effect of age group on participation in specific muscle strengthening sport and exercise activities, stratified by gender (weighted n = 6873 men, 7459 women). Table S3. The results from multiple logistic regression investigating the effect of age group, gender, and their interaction on participation levels of balance & co-ordination (weighted n = 1347 men, 1687 women). (XLSX 29 kb)
DOI: 10.6084/m9.figshare.c.3608270_d4.v1
title: Additional file 2: Table S2. of Identification and validation of potential prognostic lncRNA biomarkers for predicting survival in patients with multiple myeloma

description: List of mRNAs co-expressed with at least one of the four prognostic lncRNAs. (XLS 131Â kb)
DOI: 10.6084/m9.figshare.c.3608270_d2.v1
title: Additional file 3: Table S3. of Identification and validation of potential prognostic lncRNA biomarkers for predicting survival in patients with multiple myeloma

description: List of enriched GO terms and KEGG pathways of mRNAs co-expressed with prognostic lncRNAs. (XLS 72Â kb)
DOI: 10.57702/7dh4cogk
title: Microsoft COCO (MS-COCO) Dataset

description: A large-scale dataset for object detection and instance segmentation.
DOI: 10.6084/m9.figshare.c.3608270_d1.v1
title: Additional file 4: Table S4. of Identification and validation of potential prognostic lncRNA biomarkers for predicting survival in patients with multiple myeloma

description: List of known cancer genes recorded in NCG database which were co-expressed with four prognostic lncRNAs. (XLSX 13Â kb)
DOI: 10.57702/a6zij1ga
title: Ethiopia Socioeconomic Survey (ESS)

description: The Ethiopia Socioeconomic Survey (ESS) dataset is a nationally representative household Living Standards Measurement Study (LSMS) carried out by the World Bank between 2015 to 2016.
DOI: 10.17863/cam.84952
title: Dataset for Vibrational Stark Effects: Ionic Influence on Local Fields

description: All data for figures. Please see README file for details
DOI: 10.57702/mv8xeukr
title: ER4 and SF4 graph models

description: The authors used the ER4 and SF4 graph models, which are random graphs simulated according to the preferential attachment process.
DOI: 10.17863/cam.44528
title: Research data supporting Comparison of Methods for Quantification of Topologically Close-Packed Phases in Ni-Based Superalloys

description: Raw data is provided from SEM, laboratory XRD and synchrotron XRD experiments. The results of a thermodynamic calculation used to obtain phase compositions is also included.
DOI: 10.57702/jmiox4xc
title: PointCAM

description: Self-supervised adversarial masking for 3D point cloud representation learning