cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7155426
title: Dataset from J. Am. Chem. Soc. paper: Hydrogen-Induced Restructuring of a Cu(100) Electrode in Electroreduction Conditions

description: Dataset of the article "Hydrogen-Induced Restructuring of a Cu(100) Electrode in Electroreduction Conditions" accepted in J. Am. Chem. Soc. - ensemble_GCGA_all.db: The ASE database of all unique surface states from the grand canonical genetic algorithm (GCGA) search. - ensemble_LELM_refined.db: The ASE database of low-energy local minima surface states after refinement. - ensemble_LELM_GCDFT.db: The ASE database of low-energy local minima surface states with energy-potential relations obtained from grand canonical density functional theory (GCDFT) calculations. - input_GCGA.zip: input files of the GCGA search. - input_GCDFT.zip: input files of the GCDFT calculation. GCGA and GCDFT calculations are performed using the workflow or wrapper in the GOCIA package (https://github.com/zishengz/gocia)
DOI: 10.5281/zenodo.7077649
title: Data of Experiment "Assessing the Effect of Dialogue on Altruism Towards Future Generations"

description: Dataset consisting of the results of the Dictator Game in addition to the responses of the participants in the questionnaire of the experiment from the manuscript: "Assessing the Effect of Dialogue on Altruism Towards Future Generations".
DOI: 10.5281/zenodo.7077648
title: Data of Experiment "Assessing the Effect of Dialogue on Altruism Towards Future Generations"

description: Dataset consisting of the results of the Dictator Game in addition to the responses of the participants in the questionnaire of the experiment from the manuscript: "Assessing the Effect of Dialogue on Altruism Towards Future Generations".
DOI: 10.57745/3bbbtw
title: impala_algorithms.zip

description: :unav
DOI: 10.15151/esrf-es-874772387
title: Structural investigation of membrane and water soluble proteins

description: The portfolio of this BAG includes structural investigation of membrane proteins as well as soluble proteins relevant to various scientific fields. These range from basic science to application-related projects with impact on biotechnology (optogenetics, biocatalysts) and medicine (understanding and combating bacterial and viral pathogens).
DOI: 10.15151/esrf-es-957034992
title: Structural Biology BAG - Portugal

description: The Portuguese MX BAG includes 13 PIs from three different institutions. Our research interests include soluble and membrane proteins of biomedical interest from humans or pathogenic organisms, several of which can be drug targets. Focus is also given to structural enzymology, aimed at the elucidation of reaction mechanisms, active sites, and inhibition tolerance in proteins with potential biotechnology applications. In several cases, complementary structural biology approaches are being used, combining MX with SAXS and, more recently, CryoEM.
DOI: 10.15151/esrf-es-874800215
title: Molecular machines in energy transduction, cellular signaling and defense processes

description: Since this BAG is composed of 7 different working groups from 3 different locations (universities of Cologne, Bochum and Düsseldorf), the projects within this proposal are of rather heterogeneous nature. Nonetheless, we are focusing on five main topics: 1.) proteins involved in transport processes, transporters or channels, either embedded in the membrane or acting in the cytosol (e. g. ABC transporters, resistance proteins) 2.) proteins involved in the immune system or resistance processes of prokaryotic bacteria and plants (dehydratases, cyclases, binding proteins) 3.) proteins involved or associated with diseases like cancer or developmental disorders (e. g. metallopeptidase, protein kinase, chaperones) 4.) enzymes of putative industrial use in order to encounter increasing environmental pollution (e. g. transaminases, estereases) 5.) proteins involved in synthesis of light harvesting pigments and chromophore binding proteins (e. g. reductases, photosensor domains)
DOI: 10.15151/esrf-es-883956580
title: Austrian Crystallographic Diffraction Consortium

description: This proposed Austrian Crystallographic.... TO BE FILLED IN
DOI: 10.15151/esrf-es-902988490
title: Real-time 3D imaging of interfacial dynamics in porous media two-phase flow

description: Multiphase flow in porous media is a scientific topic of huge environmental importance, and recent advances in X-ray sources and detectors have made it feasible to study this field experimentally. Many liquid-liquid fluctuations take place on a time scale of seconds, with the pore-level Haines jumps occurring within milliseconds. It is consequently difficult to follow these processes with time-resolved 3D microscopy. Due to the short time scales, 3D imaging of these pore-scale phenomena has hitherto been limited to snapshots before and after the process has taken place. We thus propose original measurement strategies for i) real-time 3D imaging of steady-state multiphase flow fluctuations, and ii) reversible Haines jumps. We expect that these efforts will improve our understanding of the fundamental dynamics of multiphase flow, specifically testing recently published theoretical models for multiphase flow.
DOI: 10.15151/esrf-es-894750235
title: Structural Biology BAG - Portugal

description: The Portuguese MX BAG includes 13 PIs from three different institutions. Our research interests include soluble and membrane proteins of biomedical interest from humans or pathogenic organisms, several of which can be drug targets. Focus is also given to structural enzymology, aimed at the elucidation of reaction mechanisms, active sites, and inhibition tolerance in proteins with potential biotechnology applications. In several cases, complementary structural biology approaches are being used, combining MX with SAXS and, more recently, CryoEM.
DOI: 10.15151/esrf-es-903326346
title: The fundamental interaction between localised X-ray pulses and electronic devices at the nanoscale: development of a tailored facility for a
DOI: 10.15151/esrf-es-929130257
title: Nanotomography of infected cells in Medicago truncatula-Sinorhizbium meliloti nodules
DOI: 10.7265/n5tb14vt
title: Local Observations from the Seasonal Ice Zone Observing Network (SIZONet)
DOI: 10.5281/zenodo.7155551
title: Datasets for "Compositions and Interior Structures of the Large Moons of Uranus and Implications for Future Spacecraft Observations"

description: Files used to build Figures 3, 4, 5, 7, 9, 10, 13 in manuscript entitled "Compositions and Interior Structures of the Large Moons of Uranus and Implications for Future Spacecraft Observations" submitted with JGR.
DOI: 10.5281/zenodo.7155550
title: Datasets for "Compositions and Interior Structures of the Large Moons of Uranus and Implications for Future Spacecraft Observations"

description: Files used to build Figures 3, 4, 5, 7, 9, 10, 13 in manuscript entitled "Compositions and Interior Structures of the Large Moons of Uranus and Implications for Future Spacecraft Observations" submitted with JGR.
DOI: 10.6084/m9.figshare.20013560.v1
title: Scientific data used in analysis_Wulira App.xls

description: Occupational noise is a common cause of hearing loss in low-income countries. We used <em>Wulira</em> app which is a valid and potentially cheaper mhealth alternative to pure tone audiometry to screen for occupational hearing loss among industrial workers in Kampala. We recruited 354 participants conveniently from a steel and iron manufacturing industry in Kampala. All eligible participants answered a pretested and validated questionnaire and were assessed for noise induced hearing loss in a quiet office room approximately 500 meters from the heavy machinery area using the Wulira app
DOI: 10.5281/zenodo.5808574
title: Hoofprints in the Sand Supplement S1: Site Descriptions

description: Historical context and chronological descriptions for the sites which produced samples used in the size and shape change analyses, as described in Harding, S. et al. Hoofprints in the Sand: A Metric Study of Livestock on the Southern Phoenician Coast. In preparation for <em>Quaternary International</em>.
DOI: 10.5281/zenodo.5808573
title: Hoofprints in the Sand Supplement S1: Site Descriptions

description: Historical context and chronological descriptions for the sites which produced samples used in the size and shape change analyses, as described in Harding, S. et al. Hoofprints in the Sand: A Metric Study of Livestock on the Southern Phoenician Coast. In preparation for <em>Quaternary International</em>. v.2 included edits and updates based on peer review. v.3 changed the spelling of Tel Shiqmona
DOI: 10.5281/zenodo.7129053
title: Hoofprints in the Sand Supplement S1: Site Descriptions

description: Historical context and chronological descriptions for the sites which produced samples used in the size and shape change analyses, as described in Harding, S. et al. Hoofprints in the Sand: A Metric Study of Livestock on the Southern Phoenician Coast. In preparation for <em>Quaternary International</em>. v.2 included edits and updates based on peer review.
DOI: 10.5281/zenodo.7155582
title: Hoofprints in the Sand Supplement S1: Site Descriptions

description: Historical context and chronological descriptions for the sites which produced samples used in the size and shape change analyses, as described in Harding, S. et al. Hoofprints in the Sand: A Metric Study of Livestock on the Southern Phoenician Coast. In preparation for <em>Quaternary International</em>. v.2 included edits and updates based on peer review. v.3 changed the spelling of Tel Shiqmona
DOI: 10.5281/zenodo.7124008
title: Data complementing the Avian influenza overview June – September 2022

description: Annex A – Characteristics of the HPAI A(H5Nx)-positive poultry establishments The Annex contains table with the characteristics of the HPAI A(H5Nx)-positive poultry establishments by affected EU Member State from 2 June to 2 September 2022. Annex B – Applied prevention and control measures on avian influenza The Annex contains an overview of specific prevention and control measures applied in Bulgaria, Croatia, France, Hungary, Germany, Moldova, the Netherlands, Poland, Portugal, Spain from 2 June to 2 September 2022 in relation to HPAI outbreaks in poultry and in wild birds. Annex C – Data on wild birds The Annex contains tables and plots on HPAI virus notifications in wild birds in Europe.
description: EU; en; pdf; biohaw@efsa.europa.eu
DOI: 10.5281/zenodo.7124007
title: Data complementing the Avian influenza overview June – September 2022

description: Annex A – Characteristics of the HPAI A(H5Nx)-positive poultry establishments The Annex contains table with the characteristics of the HPAI A(H5Nx)-positive poultry establishments by affected EU Member State from 2 June to 2 September 2022. Annex B – Applied prevention and control measures on avian influenza The Annex contains an overview of specific prevention and control measures applied in Bulgaria, Croatia, France, Hungary, Germany, Moldova, the Netherlands, Poland, Portugal, Spain from 2 June to 2 September 2022 in relation to HPAI outbreaks in poultry and in wild birds. Annex C – Data on wild birds The Annex contains tables and plots on HPAI virus notifications in wild birds in Europe.
description: EU; en; pdf; biohaw@efsa.europa.eu
DOI: 10.5281/zenodo.7143237
title: Retrospective cumulative dietary risk assessment of craniofacial alterations by residues of pesticides

description: EFSA established cumulative assessment groups and conducted retrospective cumulative risk<br> assessments for two types of craniofacial alterations (alterations due to abnormal skeletal<br> development, head soft tissue alterations and brain neural tube defects) for 14 European populations<br> of women in childbearing age. Cumulative acute exposure calculations were performed by probabilistic<br> modelling using monitoring data collected by Member States in 2017, 2018 and 2019. A rigorous<br> uncertainty analysis was performed using expert knowledge elicitation. Considering all sources of<br> uncertainty, their dependencies and differences between populations, it was concluded with varying<br> degrees of certainty that the MOET resulting from cumulative exposure is above 100 for the two types<br> of craniofacial alterations. The threshold for regulatory consideration established by risk managers is<br> therefore not exceeded. Considering the severity of the effects under consideration, it was also<br> assessed whether the MOET is above 500. This was the case with varying levels of certainty for the<br> head soft tissue alterations and brain neural tube defects. However, for the alterations due to<br> abnormal skeletal development, it was found about as likely as not that the MOET is above 500 in<br> most populations. For two populations, it was even found more likely that the MOET is below 500.<br> These results were discussed in the light of the conservatism of the methodological approach. The indicators of craniofacial alterations, input and output data for the exposure assessment are reported in the following annexes: • Annex A – Indicators of craniofacial alterations collected for 85 selected active substances;<br> • Annex B1 – Input data for the exposure assessment of CAG-DACL;<br> • Annex B2 – Input data for the exposure assessment of CAG-DAH;<br> • Annex C1 – Output data for the Tier I exposure assessment of CAG-DAC;<br> • Annex C2 – Output data for the Tier I exposure assessment of CAG-DAH;<br> • Annex D1 – Output data for the Tier II exposure assessment of CAG-DAC;<br> • Annex D2 – Output data for the Tier II exposure assessment of CAG-DAH.
description: EU, en, xlsx, pesticides.mrl@efsa.europa.eu
DOI: 10.5281/zenodo.7143238
title: Retrospective cumulative dietary risk assessment of craniofacial alterations by residues of pesticides

description: EFSA established cumulative assessment groups and conducted retrospective cumulative risk<br> assessments for two types of craniofacial alterations (alterations due to abnormal skeletal<br> development, head soft tissue alterations and brain neural tube defects) for 14 European populations<br> of women in childbearing age. Cumulative acute exposure calculations were performed by probabilistic<br> modelling using monitoring data collected by Member States in 2017, 2018 and 2019. A rigorous<br> uncertainty analysis was performed using expert knowledge elicitation. Considering all sources of<br> uncertainty, their dependencies and differences between populations, it was concluded with varying<br> degrees of certainty that the MOET resulting from cumulative exposure is above 100 for the two types<br> of craniofacial alterations. The threshold for regulatory consideration established by risk managers is<br> therefore not exceeded. Considering the severity of the effects under consideration, it was also<br> assessed whether the MOET is above 500. This was the case with varying levels of certainty for the<br> head soft tissue alterations and brain neural tube defects. However, for the alterations due to<br> abnormal skeletal development, it was found about as likely as not that the MOET is above 500 in<br> most populations. For two populations, it was even found more likely that the MOET is below 500.<br> These results were discussed in the light of the conservatism of the methodological approach. The indicators of craniofacial alterations, input and output data for the exposure assessment are reported in the following annexes: • Annex A – Indicators of craniofacial alterations collected for 85 selected active substances;<br> • Annex B1 – Input data for the exposure assessment of CAG-DACL;<br> • Annex B2 – Input data for the exposure assessment of CAG-DAH;<br> • Annex C1 – Output data for the Tier I exposure assessment of CAG-DAC;<br> • Annex C2 – Output data for the Tier I exposure assessment of CAG-DAH;<br> • Annex D1 – Output data for the Tier II exposure assessment of CAG-DAC;<br> • Annex D2 – Output data for the Tier II exposure assessment of CAG-DAH.
description: EU, en, xlsx, pesticides.mrl@efsa.europa.eu
DOI: 10.4119/unibi/2965661
title: Supplementary Material for "Lateral attitude change: Displacement effects as a reaction to blatant social influence"
DOI: 10.5281/zenodo.5807418
title: Hoofprints in the Sand Supplement S2: LSI Datasheet

description: Provenience, dating, measurements (mm), and catalogue numbers for the skeletal elements used in the LSI analysis, as demonstrated in Harding, S. et al. Hoofprints in the Sand: A Metric Study of Livestock on the Southern Phoenician Coast. In preparation for <em>Quaternary International</em>. v.2 changed the spelling of Tel Shiqmona
DOI: 10.5281/zenodo.5807419
title: Hoofprints in the Sand Supplement S2: LSI Datasheet

description: Provenience, dating, measurements (mm), and catalogue numbers for the skeletal elements used in the LSI analysis, as demonstrated in Harding, S. et al. Hoofprints in the Sand: A Metric Study of Livestock on the Southern Phoenician Coast. In preparation for <em>Quaternary International</em>.
DOI: 10.5281/zenodo.7155588
title: Hoofprints in the Sand Supplement S2: LSI Datasheet

description: Provenience, dating, measurements (mm), and catalogue numbers for the skeletal elements used in the LSI analysis, as demonstrated in Harding, S. et al. Hoofprints in the Sand: A Metric Study of Livestock on the Southern Phoenician Coast. In preparation for <em>Quaternary International</em>. v.2 changed the spelling of Tel Shiqmona
DOI: 10.5281/zenodo.5807244
title: Hoofprints in the Sand Supplement S5: LSI Summary Stats by Site, Period, Element

description: Table of summary statistics produced in the LSI analysis per site, period, and skeletal element, as demonstrated in Harding, S. et al. Hoofprints in the Sand: A Metric Study of Livestock on the Southern Phoenician Coast. In preparation for <em>Quaternary International</em>. v.2 changed the spelling of Tel Shiqmona, abbreviation SHQ
DOI: 10.5281/zenodo.5807245
title: Hoofprints in the Sand Supplement S5: LSI Summary Stats by Site, Period, Element

description: Table of summary statistics produced in the LSI analysis per site, period, and skeletal element, as demonstrated in Harding, S. et al. Hoofprints in the Sand: A Metric Study of Livestock on the Southern Phoenician Coast. In preparation for <em>Quaternary International</em>.
DOI: 10.5281/zenodo.7155591
title: Hoofprints in the Sand Supplement S5: LSI Summary Stats by Site, Period, Element

description: Table of summary statistics produced in the LSI analysis per site, period, and skeletal element, as demonstrated in Harding, S. et al. Hoofprints in the Sand: A Metric Study of Livestock on the Southern Phoenician Coast. In preparation for <em>Quaternary International</em>. v.2 changed the spelling of Tel Shiqmona, abbreviation SHQ
DOI: 10.6084/m9.figshare.20470338
title: In vitro evaluation of platelet extracellular vesicles (PEVs) for corneal endothelial regeneration

description: Corneal endothelial cells (CECs) slowly decrease in number with increasing age, which is a clinical issue as these cells have very limited regenerative ability. Therapeutic platelet biomaterials are increasingly used in regenerative medicine and cell therapy because of their safety, cost-effective manufacture, and global availability from collected platelet concentrates (PCs). Platelet extracellular vesicles (PEVs) are a complex mixture of potent bioactive vesicles rich in molecules believed to be instrumental in tissue repair and regeneration. In this study we investigated the feasibility of using a PEVs preparation as an innovative regenerative biotherapy for corneal endothelial dysfunction. The PEVs were isolated from clinical-grade human PC supernatants by 20,000 × <i>g</i> ultracentrifugation and resuspension. PEVs exhibited a regular, fairly rounded shape, with an average size of &lt;200 nm and were present at a concentration of approximately 10<sup>11</sup> /mL. PEVs expressed cluster of differentiation 41 (CD41) and CD61, characteristic platelets membrane markers, and CD9 and CD63. ELISA and LC-MS/MS proteomic analyses revealed that the PEVs contained mixtures of growth factors and multiple other trophic factors, as well as proteins related to extracellular exosomes with functional activities associated with cell cadherin and adherens pathways. CECs treated with PEVs showed increased viability, an enhanced wound-healing rate, stronger proliferation markers, and an improved adhesion rate. PEVs did not exert cellular toxicity as evidenced by the maintenance of cellular morphology and preservation of corneal endothelial proteins. These findings clearly support further investigations of PEV biomaterials in animal models for translation as a new CEC regeneration biotherapy.
DOI: 10.6084/m9.figshare.20470338.v1
title: In vitro evaluation of platelet extracellular vesicles (PEVs) for corneal endothelial regeneration

description: Corneal endothelial cells (CECs) slowly decrease in number with increasing age, which is a clinical issue as these cells have very limited regenerative ability. Therapeutic platelet biomaterials are increasingly used in regenerative medicine and cell therapy because of their safety, cost-effective manufacture, and global availability from collected platelet concentrates (PCs). Platelet extracellular vesicles (PEVs) are a complex mixture of potent bioactive vesicles rich in molecules believed to be instrumental in tissue repair and regeneration. In this study we investigated the feasibility of using a PEVs preparation as an innovative regenerative biotherapy for corneal endothelial dysfunction. The PEVs were isolated from clinical-grade human PC supernatants by 20,000 × <i>g</i> ultracentrifugation and resuspension. PEVs exhibited a regular, fairly rounded shape, with an average size of &lt;200 nm and were present at a concentration of approximately 10<sup>11</sup> /mL. PEVs expressed cluster of differentiation 41 (CD41) and CD61, characteristic platelets membrane markers, and CD9 and CD63. ELISA and LC-MS/MS proteomic analyses revealed that the PEVs contained mixtures of growth factors and multiple other trophic factors, as well as proteins related to extracellular exosomes with functional activities associated with cell cadherin and adherens pathways. CECs treated with PEVs showed increased viability, an enhanced wound-healing rate, stronger proliferation markers, and an improved adhesion rate. PEVs did not exert cellular toxicity as evidenced by the maintenance of cellular morphology and preservation of corneal endothelial proteins. These findings clearly support further investigations of PEV biomaterials in animal models for translation as a new CEC regeneration biotherapy.
DOI: 10.6084/m9.figshare.16698265
title: Synergies and trade-offs across sustainable development goals: A novel method incorporating indirect interactions analysis

description: The Sustainable Development Goals (SDGs) are presented as significantly interacted. This database shows the direct-relation synergy matrix and trade-off matrix of 150 SDG targets.
DOI: 10.48370/ofd/b8aiwi
title: Skull measurements of pine marten (Martes martes)

description: Skull measurements of pine marten (Martes martes) collected from 1903 to 2020 in Białowieża Forest (NE Poland) and Silesia (SW Poland). Measurements of 11 traits were made with an electronic calliper for each skull: condylobasal length (CBL), maxillary tooth-row length, palatal length, zygomatic width, interorbital constriction width, postorbital constriction width, mastoid width, mandibular tooth-row length, mandible height, mandible length and braincase height, according to (Reig Ruprecht, 1989).
DOI: 10.48370/ofd/b8aiwi/td8p6w
title: TumakCBL_1903_2020_repoz.tab

description: Pine marten skull measurements
DOI: 10.6084/m9.figshare.20152388.v1
title: Targeting epiregulin in the treatment-damaged tumor microenvironment restrains therapeutic resistance

description: Original article reporting tumor micoenvironment-conferred cancer resistance
DOI: 10.6084/m9.figshare.20152388
title: Targeting epiregulin in the treatment-damaged tumor microenvironment restrains therapeutic resistance

description: Original article reporting tumor micoenvironment-conferred cancer resistance