cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.efysee
title: Occurrence Download

description: A dataset containing 1350 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepisorus macrosphaerus (Baker) Ching"
 ]
}

 The dataset includes 1350 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044481-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6bt89d
title: Occurrence Download

description: A dataset containing 343 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leucadendron microcephalum (Gand.) Gand. & Schinz"
 ]
}

 The dataset includes 343 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044482-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mjua96
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Litsea maingayi Hook.fil."
 ]
}

 The dataset includes 34 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044483-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.59t56k
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lopholaena dregeana DC."
 ]
}

 The dataset includes 70 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044484-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5k6kaw
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Country is Belize",
 "DatasetKey is one of (Field Museum of Natural History (Botany) Seed Plant Collection, Royal Botanic Gardens, Kew - Herbarium Specimens, iNaturalist Research-grade Observations, Royal Botanic Gardens, Kew - Economic Botany Collection Specimens, INSDC Sequences, Tropicos Specimens Non-MO, Natural History Museum (London) Collection Specimens, Digitalización y Sistematización de las Colecciones Biológicas Nacionales del Instituto de Biología, UNAM (Plantas vasculares), NMNH Extant Specimen Records (USNM, US), Tropicos MO Specimen Data)",
 "OccurrenceStatus is Present",
 "TaxonKey is Dalbergia stevensonii Standl."
 ]
}

 The dataset includes 35 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044485-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xn444b
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepisorus mamas Hovenkamp"
 ]
}

 The dataset includes 23 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044486-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3t6979
title: Occurrence Download

description: A dataset containing 343 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leucadendron modestum I.Williams"
 ]
}

 The dataset includes 343 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044487-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r9dsfz
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Limonium bocconei (Lojac.) Litard."
 ]
}

 The dataset includes 71 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044488-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cpthb5
title: Occurrence Download

description: A dataset containing 466300052 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 466300052 records from 15933 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044176-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ws5w4
title: Occurrence Download

description: A dataset containing 7150 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Ranatra linearis (Linnaeus, 1758)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 7150 records from 258 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083193-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fyqppk
title: Occurrence Download

description: A dataset containing 1244 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corymbia aparrerinja K.D.Hill & L.A.S.Johnson"
 ]
}

 The dataset includes 1244 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083194-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12741531
title: CircaKB Data Repository
DOI: 10.5281/zenodo.12741532
title: CircaKB Data Repository
DOI: 10.5281/zenodo.12790472
title: CircaKB Data Repository
DOI: 10.5281/zenodo.13368304
title: CircaKB Data Repository
DOI: 10.15468/dl.ydnd8s
title: Occurrence Download

description: A dataset containing 13255 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Nepa cinerea Linnaeus, 1758",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 13255 records from 478 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083196-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pqb7as
title: Occurrence Download

description: A dataset containing 29824 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Leptinotarsa decemlineata (Say, 1824)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 29824 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083195-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.84ruzf
title: Occurrence Download

description: A dataset containing 8067 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corymbia citriodora (Hook.) K.D.Hill & L.A.S.Johnson"
 ]
}

 The dataset includes 8067 records from 252 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083197-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m6fdhe
title: Occurrence Download

description: A dataset containing 2361 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Phaeostigma notatum (Fabricius, 1781)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 2361 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083199-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vpydzz
title: Occurrence Download

description: A dataset containing 1778 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corymbia ficifolia (F.Muell.) K.D.Hill & L.A.S.Johnson"
 ]
}

 The dataset includes 1778 records from 155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083201-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ug7yay
title: Occurrence Download

description: A dataset containing 29824 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Leptinotarsa decemlineata (Say, 1824)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 29824 records from 222 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083200-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.m7q4c/1
title: alltryps

description: microsatellite data
DOI: 10.5061/dryad.n687q/1
title: dataset

description: it is a paired dataset describing sperm viability and sperm velocity assessed when sperm were young or old. Please see text for details.
DOI: 10.5061/dryad.dc66k/1
title: DataIntroductionNearcticTurtles
DOI: 10.5061/dryad.dc66k/2
title: DataEstablishmentTrachemys
DOI: 10.5061/dryad.dc66k/3
title: DataSources
DOI: 10.5061/dryad.0rv1m/1
title: SoyFGNs

description: The RAR file contains four soybean functional gene networks. The README file describes the file using in details.
DOI: 10.5061/dryad.td03f/1
title: PeerJ RawData
DOI: 10.5061/dryad.7jn8t/1
title: Rum red deer pedigree

description: .RData file containing the inverse related matrix for the Isle of Rum red deer pedigree.
DOI: 10.5061/dryad.p680f/1
title: SpeciesTree concatenated alignment dataset

description: The alignment used to generate the species tree corresponds to the concatenation of twenty-nine conserved proteins as described in the material and method section of the paper.
DOI: 10.5061/dryad.p680f/2
title: Maximum Likelihood phylogeny tree of all cyanobacteria included in the study

description: The Maximum-Likelihood phylogenetic species tree was generated using PhyML 3.1.0.2 with the alignment of a concatenation of twenty-nine conserved proteins.
DOI: 10.5061/dryad.p680f/3
title: KS PUFA alignment dataset

description: The alignment used to generate the phylogeny of bacterial ketoacyl synthase domains.
DOI: 10.5061/dryad.p680f/4
title: Phylogeny of bacterial ketoacyl synthase domains

description: Maximum likelihood phylogenetic tree of bacterial KS based on gene clusters encoding secondary lipids biosynthesis and enediynes.
DOI: 10.5061/dryad.p680f/5
title: KS domains alignement

description: Alignment of the 472 KS domains detected in the 452 gene clusters.
DOI: 10.5061/dryad.p680f/6
title: Maximum-likelihood phylogenetic tree of the 472 KS domains
DOI: 10.5061/dryad.p680f/7
title: C domains alignement

description: Alignement of the 939 C domains detected in the 452 gene clusters.
DOI: 10.5061/dryad.p680f/8
title: Maximum-likelihood phylogenetic tree of the 939 C domains
DOI: 10.5061/dryad.3fr47/1
title: Oplaat_JECOL_GPGpaper_data

description: Trait scores of dandelion genotypes that were collected along a transect of historic range expansion in north-western Europe, when grown in a common greenhouse environment under control, drought and shade experimental treatments.
DOI: 10.5061/dryad.7s403/1
title: Douglas_JAE_2014_Field-data-early

description: See ReadMe file
DOI: 10.5061/dryad.7s403/2
title: Douglas_JAE_2014_Field-data-late
DOI: 10.5061/dryad.7s403/3
title: Douglas_JAE_2014_Insecticide-residues
DOI: 10.5061/dryad.7s403/4
title: Douglas_JAE_2014_Lab-plant-slug
DOI: 10.5061/dryad.7s403/5
title: Douglas_JAE_2014_Lab-slug-beetle
DOI: 10.5061/dryad.4fk53/1
title: transcripts

description: Fasta file containing all loci and transcripts from de novo assembly of Kochia scoparia Illumina HiSeq data using Oases.
DOI: 10.5061/dryad.4fk53/2
title: pseudomolecule

description: Fasta file containing a pseudomolecule for the Kochia scoparia de novo transcriptome. The single longest transcript for each locus was concantenated into a single pseudomolecule to be used for RNA-Seq alignments.
DOI: 10.5061/dryad.4fk53/3
title: Pseudomolecule annotation

description: GTF version 3 annotation file for the Fasta file containing a pseudomolecule for the Kochia scoparia de novo transcriptome. The single longest transcript for each locus was concantenated into a single pseudomolecule to be used for RNA-Seq alignments.
DOI: 10.5061/dryad.4fk53/4
title: Pseudomolecule annotation

description: GFF versoion 3 annotation for the Fasta file containing a pseudomolecule for the Kochia scoparia de novo transcriptome. The single longest transcript for each locus was concantenated into a single pseudomolecule to be used for RNA-Seq alignments.
DOI: 10.5061/dryad.f6s22/2
title: Penstemon

description: SNAP hidden Markov model parameter file used for Penstemon.
DOI: 10.5061/dryad.f6s22/3
title: Penstemon-MAKER-FuncAnnots

description: Excel spreadsheet of functional annotations added to MAKER2 structural annotations.
DOI: 10.5061/dryad.f6s22/4
title: MakerEST

description: FASTA file of EST sequences used during MAKER2 runs.
DOI: 10.5061/dryad.f6s22/5
title: MakerProtein

description: FASTA file of protein sequences used during MAKER2 runs.
DOI: 10.5061/dryad.ks62j/1
title: Growth rates and mortality data

description: Trait data for songbird species from four continents based on data collected in the field at each site.
DOI: 10.5061/dryad.m6h1g/1
title: temperature_responses_traits

description: Published data on temperature responses of attack rate, handling time, and competition coefficients of the cotton aphid
DOI: 10.5061/dryad.cs12r/1
title: Macrosatellites_6digit

description: Genotypes of 448 individual salamanders for 16 microsatellites, used for genetic population structure analyses. ID_lab: individual ID; POP: sampling population; LOCPRIOR: sampling location used as LOCPRIOR in STRUCTURE analyses; 16 columns for the diploid macrosatellites loci (zeros indicate not genotyped alleles).
DOI: 10.5061/dryad.2856m/1
title: GENOTYPES

description: Excel file with the genotypes at each Acp marker in the second and third chromosome lines.  1=AA, 2 = CC, 3 = GG, 4 = TT, 5 = INSERTION, 6 = DELETION, NaN = MISSING DATA
DOI: 10.5061/dryad.2856m/2
title: PHENOTYPES

description: Excel file with the raw phenotype data in different worksheets.
DOI: 10.5061/dryad.2856m/3
title: Acp26Aa alignments

description: MEGA format
DOI: 10.5061/dryad.rs80t/1
title: Seedling survival and sources of mortality (consumers or wiliing stress) for N. alpina and N. dombeyi

description: Data recorded in the field for Nothofagus seedling transplants at the end of the experiment, after two growing seasons in a Patagonian mixed forest (excel .xls file)
DOI: 10.5061/dryad.rs80t/2
title: Seedling mortality attributed to invertebrate consumers

description: Mortality of Nothofagus seedlings recorded in the field at the end of the experiment, after two growing seasons in a Patagonian mixed forest (excel .xls file).
DOI: 10.5061/dryad.rs80t/3
title: Seedling mortality attributed to vertebrate consumers

description: Mortality of Nothofagus seedlings recorded in the field at the end of the experiment, after two growing seasons in a Patagonian mixed forest (excel xls. file)
DOI: 10.5061/dryad.rs80t/4
title: Leaf area removed by folivoruos insects in N. alpina seedlings

description: Herbivory recorded in the field on Nothofagus alpina surviving seedlings at the end of the experiment, after two growing seasons in a Patagonian mixed forest (excel xls. file).
DOI: 10.5061/dryad.rs80t/5
title: Leaf area removed by folivoruos insects in N. dombeyi seedlings

description: Herbivory recorded in the field on Nothofagus dombeyi surviving seedlings at the end of the experiment, after two growing seasons in a Patagonian mixed forest (excel xls. file)
DOI: 10.5061/dryad.rs80t/6
title: No. of leaves per N. alpina plant

description: Data recorded in the field on surviving seedlings of Nothofagus alpina at the end of the experiment, after two growing seasons in a Patagonian mixed forest (excel xls. file)
DOI: 10.5061/dryad.rs80t/7
title: No. of leaves per N. dombeyi plant

description: Data recorded in the field on surviving seedlings of Nothofagus dombeyi at the end of the experiment, after two growing seasons in a Patagonian mixed forest (excel xls. file)
DOI: 10.5061/dryad.rs80t/8
title: Understorey microenvironment - Photosynthetic photon flux density records

description: Measurements were taken in the forest understorey in February 2004 (midsummer) over two consecutive sunny days (excel xls. file)
DOI: 10.5061/dryad.rh04m/2
title: contig.fna

description: Assembly from multiple assemble procedure, read fastq files can be downloaded from NCBI SRA center by link to http://www.ncbi.nlm.nih.gov/sra/SRX378204
DOI: 10.5061/dryad.rs80t/10
title: Understorey microenvironment - Temperature of topsoil layer records

description: Measurements were taken in the forest understorey in February 2004 (midsummer) over two consecutive sunny days (excel xls. file)
DOI: 10.5061/dryad.rs80t/11
title: Understorey microenvironment - Mineral soil mositure records

description: Measurements were taken in the forest understorey in February 2004 (midsummer) over two consecutive sunny days (excel xls. file)
DOI: 10.5061/dryad.rs80t/12
title: Understorey microenvironment - Litter depth records

description: Measurements were taken in the forest understorey in February 2004 (midsummer) over two consecutive sunny days (excel xls. file)
DOI: 10.5061/dryad.rs80t/9
title: Understorey microenvironment - Temperature of litter layer records

description: Measurements were taken in the forest understorey in February 2004 (midsummer) over two consecutive sunny days (excel xls. file)
DOI: 10.5061/dryad.f0d93/1
title: MEC-13-0531 (source data, and variable names and labels)

description: Source data, and variable names and labels, used for MEC-13-0531. Separate sheets refer to information related to: (1) adult trees, (2) offspring, (3) reproductive variables, (4) developed seeds per cone, (5 & 6) seed weight & embryo data, (7) germination, and (8) seedling variables.
DOI: 10.5061/dryad.19264/1
title: MHC class I alleles

description: Ctenophorus ornatus MHC I putative functional allele sequences. Aligned fasta file.
DOI: 10.5061/dryad.19264/2
title: Individual tick count and number of MHC allles

description: Ctenophorus ornatus Individual tick count and number of MHC allles. Information about habitat and population of origin is also included. Excel format.
DOI: 10.5061/dryad.19264/3
title: MHC and microsatellite genotypes

description: MHC and microsatellite genotypes. MHC genotypes are in Structure-like dominant format (each allele trated as a separate locus). Microsatellite genotypes are in Structure-like one-line-per genotype format. Excel file.
DOI: 10.5061/dryad.19264/4
title: Ctenophorus_ornatus_expression_data

description: This file contains results of MHC genotyping of 4 individuals using genomic DNA (gDNA) and cDNA synthesized from DNAse-treated RNA (cDNA); for one individual only cDNA data are available. Because in no gDNA/cDNA pair coverage in both samples was sufficient for rigorous genotyping (min 300 reads), we present raw read counts of putative true alleles (identified as such using the entire dataset). On the basis of the read counts in gDNA/cDNA samples we assign "expressed", "not_expressed" and in few cases "undetermined" expression status to those alleles.
DOI: 10.5061/dryad.g6q07/1
title: Depth-bathymetry file

description: Use as land mask file when depth=0
DOI: 10.5061/dryad.g6q07/2
title: MITgcm_SeaIce_GFDL_CM3_RCP85_2006-2100

description: Monthly average sea ice and snow conditions in the Canadian Arctic Archipelago 2006-2100 under climate warming scenario RCP85. Model output in netcdf files, time steps of 1 month starting on January 2006.
DOI: 10.5061/dryad.2822t/1
title: FCS Figure Files
DOI: 10.5061/dryad.042nm/1
title: Seedling survival model data

description: Data were collected from five forested sites around New York State. We indicate the site, deer access (1=deer access, 0=fencing), and earthworm count and dry biomass (each data point from 10 50x50cm quadrats).We have included environmental measurements used in the models, such as pH, Leaf Area Index, slope, soil type and tree species richness. The survival of each species is indicated by column headers of species name (ie. Actaea), with 1 for surviving individuals and 0 for dead individuals. Finally, we list the initial measurements of each species at planting in the columns market with I.Species. For the majority of species, this is leaf width measured in cm. However, due to their growth forms, Carex was measured by # culms, Brachyelytrum by height (cm) and Fraxinus by leaf number.
DOI: 10.5061/dryad.042nm/2
title: Rodent attack

description: Data were collected in 2012, approximately 1 month after planting seedlings, and in spring 2013. We analyzed the data at the plot level, so each data point includes site, earthworm invasion status (Worm), and fencing (Deer). Rodent digs or browse are listed as Success, and the remaining untouched seedlings are listed as Failure.
DOI: 10.5061/dryad.042nm/3
title: Insect attack

description: See Rodent attack description for column information. Because insect attack can only be observed on living plants, we divided the actual number of insect attack events by proportion of seedlings surviving.