cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30174889
title: Raster_figures_ of_Spatial_prioritization_for_the_zonation_of_a_reef_system_in_a_new_remote_Marine_Protected_Area_in_the_Southern_Gulf_of_Mexico

description: This dataset contains raster layers used for the spatial prioritization analysis of coral reef habitats in Cayo Arenas. The files include thematic and derived layers that support the multi-criteria evaluation presented in the associated manuscript.Thematic map: The field <i>Original_V</i> indicates the habitat classes.Beta-diversity map: The field <i>Gridcode</i> represents the habitat classes used in the analysis.Seascape metrics:Patch compactnessConnectivity between patchesHabitat availabilitySpatial change (DeltaCue analysis)Optimal priority map: result of the iterative Weighted Overlay Analysis (WOA). The field <i>Value</i> indicates the final conservation priority score (1–5), where higher values correspond to higher conservation priority.These datasets are provided to ensure transparency and reproducibility of the prioritization framework. They can also be adapted for further spatial analyses in reef conservation planning.
DOI: 10.15468/dl.r44m7a
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bonamia ostreae",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016665-250920141307145/datasets/export for details.
DOI: 10.6084/m9.figshare.30174889.v2
title: Raster_figures_ of_Spatial_prioritization_for_the_zonation_of_a_reef_system_in_a_new_remote_Marine_Protected_Area_in_the_Southern_Gulf_of_Mexico

description: This dataset contains raster layers used for the spatial prioritization analysis of coral reef habitats in Cayo Arenas. The files include thematic and derived layers that support the multi-criteria evaluation presented in the associated manuscript.Thematic map: The field <i>Original_V</i> indicates the habitat classes.Beta-diversity map: The field <i>Gridcode</i> represents the habitat classes used in the analysis.Seascape metrics:Patch compactnessConnectivity between patchesHabitat availabilitySpatial change (DeltaCue analysis)Optimal priority map: result of the iterative Weighted Overlay Analysis (WOA). The field <i>Value</i> indicates the final conservation priority score (1–5), where higher values correspond to higher conservation priority.These datasets are provided to ensure transparency and reproducibility of the prioritization framework. They can also be adapted for further spatial analyses in reef conservation planning.
DOI: 10.6084/m9.figshare.30174889.v1
title: Raster_figures_ of_Spatial_prioritization_for_the_zonation_of_a_reef_system_in_a_new_remote_Marine_Protected_Area_in_the_Southern_Gulf_of_Mexico

description: This dataset contains raster layers used for the spatial prioritization analysis of coral reef habitats in Cayo Arenas. The files include thematic and derived layers that support the multi-criteria evaluation presented in the associated manuscript.Thematic map: The field <i>Original_V</i> indicates the habitat classes.Beta-diversity map: The field <i>Gridcode</i> represents the habitat classes used in the analysis.Seascape metrics:Patch compactnessConnectivity between patchesHabitat availabilitySpatial change (DeltaCue analysis)Optimal priority map: result of the iterative Weighted Overlay Analysis (WOA). The field <i>Value</i> indicates the final conservation priority score (1–5), where higher values correspond to higher conservation priority.These datasets are provided to ensure transparency and reproducibility of the prioritization framework. They can also be adapted for further spatial analyses in reef conservation planning.
DOI: 10.17026/ar/6efucf
title: PAN-00149475 - shallow terra sigillata plate with flat bottom

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00149475&lt;/p&gt;
description: Modified: 2025-06-12T16:54:46+02:00
DOI: 10.15468/dl.mksm3f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bonamia ostreae",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016668-250920141307145/datasets/export for details.
DOI: 10.34847/nkl.00bas5l9
title: unine16a19m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.9ee4ue1o
title: unine16a17m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.e2e5g77f
title: unine16a18d

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.ecee216p
title: unine16a20m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.4f0e5f4h
title: unine16a28m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.8c3b92po
title: unine17a02m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.a93053w1
title: unine16a30d

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.aa50l632
title: unine17a01m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.adafkt03
title: unine16a21d

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.b537x440
title: unine16a22m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.b7594v2x
title: unine16a26m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.bbb1b83r
title: unine16a25m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.da838di0
title: unine16a27d

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.de8ee8z3
title: unine16a24d

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.15468/dl.93f5uk
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bonamia ostreae",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016667-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/mibbuy
title: PAN-00038315 - blade

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00038315&lt;/p&gt;
description: Modified: 2025-07-08T10:29:02+02:00
DOI: 10.5281/zenodo.17155159
title: Nanorate sequencing reveals the Arabidopsis somatic mutation landscape

description: Data related to Nanorate sequencing reveals the Arabidopsis somatic mutation landscape. Includes pre-filter variants and callable coverage values from all NanoSeq libraries. The pre-filter variants include all cases where a DNA molecule had at least one PCR duplicate from each strand supporting the same non-reference base. The callable coverage files are NumPy arrays the length of each chromosome, where the value is the number of opportunities for a mutation to be detected in the sample (the callable coverage). The scripts used to create these files and code used to generate figures from them can be found at https://github.com/cullanm/arabidopsis-mutation-landscape.
DOI: 10.5281/zenodo.17155160
title: Nanorate sequencing reveals the Arabidopsis somatic mutation landscape

description: Data related to Nanorate sequencing reveals the Arabidopsis somatic mutation landscape. Includes pre-filter variants and callable coverage values from all NanoSeq libraries. The pre-filter variants include all cases where a DNA molecule had at least one PCR duplicate from each strand supporting the same non-reference base. The callable coverage files are NumPy arrays the length of each chromosome, where the value is the number of opportunities for a mutation to be detected in the sample (the callable coverage). The scripts used to create these files and code used to generate figures from them can be found at https://github.com/cullanm/arabidopsis-mutation-landscape.
DOI: 10.15468/dl.tkh7x8
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Liobagrus formosanus",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 35 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016669-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/4dlvyl
title: PAN-00177607 - ring unspecified (period unspecified)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00177607&lt;/p&gt;
description: Modified: 2025-07-24T09:56:22+02:00
DOI: 10.17026/ar/6sugsu
title: PAN-00167854 - ceramic ballista ball (Roman)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00167854&lt;/p&gt;
description: Modified: 2025-04-29T14:35:41+02:00
DOI: 10.17026/ar/ed84r3
title: PAN-00109033 - coin/coin-related, Gordianus III (238-244), antoninianus

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00109033&lt;/p&gt;
description: Modified: 2025-07-07T09:52:54+02:00
DOI: 10.15468/dl.xmrkdu
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Aubrieta pinardii)"
 ]
}

 The dataset includes 14 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016670-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/dqz1us
title: PAN-00107716 - coin/coin-related, Keltisch (AVAVCIA) , aes

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00107716&lt;/p&gt;
description: Modified: 2025-06-11T07:09:57+02:00
DOI: 10.17026/ar/9wijvn
title: PAN-00015924 - lead hook-and-line sinker

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00015924&lt;/p&gt;
description: Modified: 2025-07-10T14:31:53+02:00
DOI: 10.15468/dl.pgba2j
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Monomorium floricola",
 "Country is Ecuador",
 "HasCoordinate is true"
 ]
}

 The dataset includes 36 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016671-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/7wk4xt
title: PAN-00104834 - coin/coin-related, Arcadius (383-408), aes IV

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00104834&lt;/p&gt;
description: Modified: 2025-05-06T10:00:42+02:00
DOI: 10.21227/5w4w-4546
title: "Spherical point clouds data for verification"

description: "There are some spherical point cloud data for verification. "
DOI: 10.15468/dl.yfuk86
title: Occurrence Download

description: A dataset containing 329 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anguilla japonica",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 329 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016672-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/exw4xm
title: PAN-00176028 - Solid cross pendant group A3

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00176028&lt;/p&gt;
description: Modified: 2025-06-24T14:09:23+02:00
DOI: 10.17026/ar/kki7va
title: PAN-00134014 - smelt waste or lump of copper-alloy

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00134014&lt;/p&gt;
description: Modified: 2025-05-07T12:18:06+02:00
DOI: 10.15468/dl.cydpja
title: Occurrence Download

description: A dataset containing 9007 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Aurinia saxatilis)"
 ]
}

 The dataset includes 9007 records from 202 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016673-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/n8mjyf
title: PAN-00042287 - ring unspecified (Roman period)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00042287&lt;/p&gt;
description: Modified: 2025-07-24T16:35:57+02:00
DOI: 10.17026/ar/xmixzc
title: PAN-00172988 - devotional pendant Modern period

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00172988&lt;/p&gt;
description: Modified: 2025-04-28T15:09:18+02:00
DOI: 10.15468/dl.xxjf4v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Didemnum psammatodes",
 "Country is Jamaica",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016677-250920141307145/datasets/export for details.
DOI: 10.15468/dl.c7pajg
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Didemnum psammatodes",
 "Country is Belize",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016675-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b2bsgw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Didemnum psammatodes",
 "Country is Iran (Islamic Republic of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016676-250920141307145/datasets/export for details.
DOI: 10.17026/ar/50jjnd
title: PAN-00021689 - knife group 1 (period indefinite)

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00021689&lt;/p&gt;
description: Modified: 2025-07-18T13:27:12+02:00
DOI: 10.15468/dl.phmuu6
title: Occurrence Download

description: A dataset containing 439 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anguilla marmorata",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 439 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016679-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16985687
title: Complex Assembly and Activity States as Multifaceted Protein Attributes Explaining Phenotypic Variability

description: Cell function studies primarily focus on measuring overall molecular abundances while often overlooking critical clues—including protein modifications and molecular interaction networks—that critically determine the functional properties of the cell. In prior work, we introduced a suite of methods to reveal context-specific transcription factor-gene regulatory networks, kinase-substrate networks, and protein interaction networks and leveraged them to gain deeper insights into transcriptional regulation and signal transduction. However, the complex interdependencies between these networks are still elusive. To address this challenge, we introduce a multi-omics framework, aimed at harnessing measured or inferred protein activity in context-specific networks, which yields deeper functional insights into mechanisms underlying molecular phenotypes, compared to protein abundance alone. As proof of concept, we utilized progressively differentiated instances of HeLa CCL2 and Kyoto cell lines to explore the role of protein complexes and interactions in cell doubling time and susceptibility to Salmonella Typhimurium infection. Notably, this analysis underscores the pivotal role of protein interaction networks in linking molecular profiles to phenotypic outcomes, thus providing a highly generalizable framework for multi-omics dataset analysis.
DOI: 10.5281/zenodo.16985688
title: Complex Assembly and Activity States as Multifaceted Protein Attributes Explaining Phenotypic Variability

description: Cell function studies primarily focus on measuring overall molecular abundances while often overlooking critical clues—including protein modifications and molecular interaction networks—that critically determine the functional properties of the cell. In prior work, we introduced a suite of methods to reveal context-specific transcription factor-gene regulatory networks, kinase-substrate networks, and protein interaction networks and leveraged them to gain deeper insights into transcriptional regulation and signal transduction. However, the complex interdependencies between these networks are still elusive. To address this challenge, we introduce a multi-omics framework, aimed at harnessing measured or inferred protein activity in context-specific networks, which yields deeper functional insights into mechanisms underlying molecular phenotypes, compared to protein abundance alone. As proof of concept, we utilized progressively differentiated instances of HeLa CCL2 and Kyoto cell lines to explore the role of protein complexes and interactions in cell doubling time and susceptibility to Salmonella Typhimurium infection. Notably, this analysis underscores the pivotal role of protein interaction networks in linking molecular profiles to phenotypic outcomes, thus providing a highly generalizable framework for multi-omics dataset analysis.
DOI: 10.15468/dl.ewqete
title: Occurrence Download

description: A dataset containing 616 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.HKG",
 "TaxonKey is Pycnonotus sinensis",
 "Year 1995-2005"
 ]
}

 The dataset includes 616 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016678-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/n4inge
title: PAN-00106009 - coin/coin-related, Constantinus I (306-337), voor Constantinus II, nummus

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00106009&lt;/p&gt;
description: Modified: 2025-06-02T07:39:46+02:00
DOI: 10.34847/nkl.0fcez48u
title: unine18a01m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.19a72ue3
title: unine18a04m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.238be5hv
title: unine18a14m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.26e5abkn
title: unine17a05m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.321fj5xa
title: unine18a13m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.79b31im6
title: unine18a05m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.88dc9w14
title: unine18a08m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.92be5973
title: unine18a03d

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.a3d21430
title: unine18a06d

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.aaa5dlm0
title: unine17a04m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.c3cby5u1
title: unine18a07m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.ebac39hs
title: unine17a06d

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.f25720ay
title: unine18a02m

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.34847/nkl.dd340m30
title: unine18a09d

description: Fichier source (TGD).
description: Fichier source (WAV).
description: Fichier dérivé (TEI).
DOI: 10.5281/zenodo.17184299
title: Rib waveguides for Kerr nonlinear optics

description: Raw data and MATLAB codes for plotting the figures presented in the paper titled Rib waveguides for Kerr nonlinear optics.
DOI: 10.5281/zenodo.17184298
title: Rib waveguides for Kerr nonlinear optics

description: Raw data and MATLAB codes for plotting the figures presented in the paper titled Rib waveguides for Kerr nonlinear optics.
DOI: 10.17026/ar/ztvzwf
title: PAN-00008148 - coin/coin-related, Gallische tegenkeizer ?, naar, antoninianus

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00008148&lt;/p&gt;
description: Modified: 2025-06-10T08:29:41+02:00