cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6240931
title: Homocysteine, folic acid, cyanocobalamin, and frailty in older people: findings from the "Invece. Ab" Study

description: <strong>The database includes</strong> the raw data of the article “Homocysteine, Folic Acid, Cyanocobalamin, and Frailty in Older People: Findings From the “Invece. Ab” Study”. <strong>Aim of the work</strong> was to verify the association of homocysteine (HOcy), cyanocobalamin (B12), and folic acid (FO) plasma concentrations with frailty and to underline the influence of these biomarkers on frailty incidence in a community dwelling older population, studied longitudinally (2012, 2014 and 2018 waves). <strong>The database contains</strong> data obtained by the evaluations of plasma levels of i) HOcy, ii) B12 and iii) FO using chemiluminescent microparticle immunoassay on an Architect 2000 analyzer (Abbott) within 3h of blood collection. Briefly, we found that frail subjects increased from the 2014 wave to the 2018 wave of the study. Moreover, the median concentration of HOcy increased with age only in males and it showed a significant positive correlation with the Frailty Index (FI) at all three waves of the study; no positive correlation was instead reported for B12 and FO. HOcy seems to be a predictor of cumulative incidence of frailty (during the six years of the study), independent of age, sex, and education, although HOcy80 (19.4μmol/l - cutoff for the 80th percentile) showed only a positive trend in this sense. On the contrary HOcy90 (23.3μmol/l - cutoff for the 90th percentile) significantly influenced the cumulative incidence of frailty. B12 and FO showed no relationship with the cumulative incidence of frailty. Finally, subjects with plasma HOcy concentrations in the top quintile (HOcy80) had five fewer frailty-free months; this finding was independent of age, sex, and education. A comparable frailty-free survival time, was found for plasma HOcy concentrations in the top decile (HOcy90). <strong>To conclude</strong>, high plasma concentrations of HOcy, could be a factor that increases the likelihood of becoming frail and becoming frail sooner; these results showed a clear association with frailty. Moreover, the role of B12 and FO plasma concentrations was found to be marginal.
description: Funding: "Federazione Alzheimer Italia"
DOI: 10.5281/zenodo.6240930
title: Homocysteine, folic acid, cyanocobalamin, and frailty in older people: findings from the "Invece. Ab" Study

description: <strong>The database includes</strong> the raw data of the article “Homocysteine, Folic Acid, Cyanocobalamin, and Frailty in Older People: Findings From the “Invece. Ab” Study”. <strong>Aim of the work</strong> was to verify the association of homocysteine (HOcy), cyanocobalamin (B12), and folic acid (FO) plasma concentrations with frailty and to underline the influence of these biomarkers on frailty incidence in a community dwelling older population, studied longitudinally (2012, 2014 and 2018 waves). <strong>The database contains</strong> data obtained by the evaluations of plasma levels of i) HOcy, ii) B12 and iii) FO using chemiluminescent microparticle immunoassay on an Architect 2000 analyzer (Abbott) within 3h of blood collection. Briefly, we found that frail subjects increased from the 2014 wave to the 2018 wave of the study. Moreover, the median concentration of HOcy increased with age only in males and it showed a significant positive correlation with the Frailty Index (FI) at all three waves of the study; no positive correlation was instead reported for B12 and FO. HOcy seems to be a predictor of cumulative incidence of frailty (during the six years of the study), independent of age, sex, and education, although HOcy80 (19.4μmol/l - cutoff for the 80th percentile) showed only a positive trend in this sense. On the contrary HOcy90 (23.3μmol/l - cutoff for the 90th percentile) significantly influenced the cumulative incidence of frailty. B12 and FO showed no relationship with the cumulative incidence of frailty. Finally, subjects with plasma HOcy concentrations in the top quintile (HOcy80) had five fewer frailty-free months; this finding was independent of age, sex, and education. A comparable frailty-free survival time, was found for plasma HOcy concentrations in the top decile (HOcy90). <strong>To conclude</strong>, high plasma concentrations of HOcy, could be a factor that increases the likelihood of becoming frail and becoming frail sooner; these results showed a clear association with frailty. Moreover, the role of B12 and FO plasma concentrations was found to be marginal.
description: Funding: "Federazione Alzheimer Italia"
DOI: 10.25345/c5qb9v679
title: MassIVE Reanalysis RMSV000000354.5009 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, PEX19 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5kk94d3j
title: MassIVE Reanalysis RMSV000000354.5011 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, PCDHGA5 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5ft8dk89
title: MassIVE Reanalysis RMSV000000354.5010 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, LRCH3 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5b27ps30
title: MassIVE Reanalysis RMSV000000354.5015 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ANXA11 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5281/zenodo.6241273
title: Data used to prepare a PED archetype

description: You can find some raw data used to prepare a PED archetype to conduct a bunch of simulations to measure the impacts of electric cars on the PED archetype.
DOI: 10.5281/zenodo.6226680
title: Data used to prepare a PED archetype

description: You can find some raw data used to prepare a PED archetype to conduct a bunch of simulations to measure the impacts of electric cars on the PED archetype.
DOI: 10.25345/c5696zz97
title: MassIVE Reanalysis RMSV000000354.5016 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, SLC19A3 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c52j6856c
title: MassIVE Reanalysis RMSV000000354.5014 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, RUFY2 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5xw47x49
title: MassIVE Reanalysis RMSV000000354.5013 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, WDTC1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.48370/ofd/7bbrys
title: Phlebiella christiansenii (Parmasto) K.H.Larss. Hjortstam, 561

description: Fungarium Makromycetes
DOI: 10.48370/ofd/sw20u7
title: Phlebiella christiansenii (Parmasto) K.H.Larss. Hjortstam, 677

description: Fungarium Makromycetes
DOI: 10.5281/zenodo.6226681
title: Data used to prepare a PED archetype

description: You can find some raw data used to prepare a PED archetype to conduct a bunch of simulations to measure the impacts of electric cars on the PED archetype.
DOI: 10.5281/zenodo.6131510
title: A saturation-mutagenesis analysis of the interplay between stability and activation in Ras

description: Dataset for the Hidalgo et al. eLife paper DOI: https://doi.org/10.7554/eLife.76595
description: {"references": ["DOI: https://doi.org/10.7554/eLife.76595", "Hidalgo et al. A saturation-mutagenesis analysis of the interplay between stability and activation in Ras"]}
DOI: 10.5281/zenodo.6131509
title: A saturation-mutagenesis analysis of the interplay between stability and activation in Ras

description: Dataset for the Hidalgo et al. eLife paper DOI: https://doi.org/10.7554/eLife.76595
description: {"references": ["DOI: https://doi.org/10.7554/eLife.76595", "Hidalgo et al. A saturation-mutagenesis analysis of the interplay between stability and activation in Ras"]}
DOI: 10.25345/c5t43j41c
title: MassIVE Reanalysis RMSV000000354.5021 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, RASD1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5pc2t97m
title: MassIVE Reanalysis RMSV000000354.5018 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, CRH [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5jm23h2c
title: MassIVE Reanalysis RMSV000000354.5019 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, VIT [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5dv1cp74
title: MassIVE Reanalysis RMSV000000354.5020 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, TES [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.6084/m9.figshare.19130255
title: Poultry excreta bacterial isolates and antibiotic suceptibility

description: This is a data set which shows pattern of bacterial isolates namely <i>Escherichia Coli (E.coli)</i> and Salmonella isolated from fresh poultry excreta in Sierra Leone. <br>Alos this data set features antibiotic susceptibility to E.coli isolates
DOI: 10.6084/m9.figshare.19130255.v1
title: Poultry excreta bacterial isolates and antibiotic suceptibility

description: This is a data set which shows pattern of bacterial isolates namely <i>Escherichia Coli (E.coli)</i> and Salmonella isolated from fresh poultry excreta in Sierra Leone. <br>Alos this data set features antibiotic susceptibility to E.coli isolates
DOI: 10.6084/m9.figshare.19221495
title: Supplementary Material for: Growth Differentiation Factor 15 Is Superior to Troponin I in the Evaluation of Kidney Transplant Candidates

description: <b><i>Introduction:</i></b> Pretransplant cardiac troponin I (cTNI) has demonstrated its predicting value in survival after kidney transplant. Growth differentiation factor 15 (GDF-15) is a biomarker currently studied as a predictor of mortality and cardiovascular events (CVE) in different scenarios. The aim of this study was to compare the utility of these two biomarkers in the prediction of events after kidney transplant. <b><i>Methods:</i></b> We included 359 kidney transplants performed in our center between 2005 and 2015. cTNI and GDF-15 were measured on stored serum samples obtained pretransplant. <b><i>Results:</i></b> Median GDF-15 was 5,346.4 pg/mL, and cTNI was 5.6 ng/L. After follow-up, 77 (21.5%) patients died, and the incidence of cerebrovascular accident (CVA), acute coronary syndrome (ACS), and major adverse CVEs (MACE) was 6.38%, 12.68%, and 20.56%, respectively. Patients were stratified in tertiles according to GDF-15 and cTNT levels. By multivariate cox regression analysis including both biomarkers and different clinical characteristics, we found a significant relation between GDF-15 and mortality, CVAs, and MACE (highest tertile hazard ratio [HR] 2.2 95% confidence interval [CI] [1.2–4.1], <i>p</i> = 0.01, HR 9.7 CI 95% [2.2–43.1], <i>p</i> = 0.003 and HR 2.7 CI 95% [1.4–5.1], <i>p</i> = 0.002). On the contrary, posttransplant ACS was related to cTNI (highest cTNI tertile HR 3.2 CI 95% [1.5–7.3], <i>p</i> = 0.003). <b><i>Discussion:</i></b> Our study indicates the potential utility of GDF-15 as a mortality and CVE predictor after kidney transplant and its superiority compared to cTNI. By contrast, probably due to its tissue specificity, cardiac troponin showed a stronger correlation with acute coronary events. Although more studies are needed to confirm our findings, these two molecules could be used in conjunction with other tools to predict adverse events after transplant and ideally find strategies to minimize them.
DOI: 10.25345/c5930nw39
title: MassIVE Reanalysis RMSV000000354.5012 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, SFTA2 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.48370/ofd/11xxet/qxcyyd
title: Agrilus convexicollis.JPG

description: :unav
DOI: 10.48370/ofd/11xxet
title: Opiętek jesionowy (Agrilus convexicollis (Redtenbacher, 1849)), C-346

description: Coleoptera collection
DOI: 10.25345/c5599z30h
title: MassIVE Reanalysis RMSV000000354.5026 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, STK11 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.48370/ofd/3da2ts
title: Phlebiella christiansenii (Parmasto) K.H.Larss. Hjortstam, 680

description: Fungarium Makromycetes
DOI: 10.25345/c51n7xn8k
title: MassIVE Reanalysis RMSV000000354.5022 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, LIN37 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5ww7714g
title: MassIVE Reanalysis RMSV000000354.5028 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ARNT2 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5s46h70n
title: MassIVE Reanalysis RMSV000000354.5027 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, B4GALT7 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5nc5sd5d
title: MassIVE Reanalysis RMSV000000354.5023 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, TRIB3 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5hm52m05
title: MassIVE Reanalysis RMSV000000354.5017 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, NPRL2 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.