cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.zfq2dp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry MULTIPOLYGON(((-57.45269 -28.07633,-57.46768 -28.09041,-57.43818 -28.10978,-57.44305 -28.13626,-57.54397 -28.21314,-57.58415 -28.28343,-57.57311 -28.34005,-57.62668 -28.39573,-57.56216 -28.36502,-57.56913 -28.39707,-57.49143 -28.37355,-57.48235 -28.34794,-57.32254 -28.26316,-57.34211 -28.23342,-57.3115 -28.25196,-57.33083 -28.22765,-57.28995 -28.20175,-57.26549 -28.21334,-57.28221 -28.18509,-57.38288 -28.25018,-57.38002 -28.13612,-57.30427 -28.138,-57.28864 -28.1577,-57.31612 -28.18478,-57.25584 -28.12927,-57.22323 -28.13813,-57.21004 -28.17691,-57.15156 -28.15364,-57.12223 -28.09552,-57.16408 -28.07195,-57.12052 -28.02508,-57.15509 -28.07273,-57.13108 -28.06414,-57.09669 -27.9857,-57.11179 -27.96746,-57.19211 -27.98671,-57.21332 -28.0617,-57.29535 -28.07368,-57.22708 -28.00314,-57.27881 -28.0251,-57.28091 -28.0017,-57.22427 -27.95556,-57.2658 -27.90998,-57.22691 -27.90102,-57.22029 -27.95266,-57.19679 -27.93551,-57.22291 -27.87415,-57.26712 -27.87727,-57.24856 -27.85856,-57.29522 -27.87831,-57.28192 -27.84219,-57.402 -27.97586,-57.4308 -28.0402,-57.41779 -28.06666,-57.44332 -28.05007,-57.45269 -28.07633),(-57.45269 -28.07633,-57.45269 -28.07636,-57.4527 -28.07635,-57.45269 -28.07633)),((-57.54432 -28.48477,-57.58285 -28.46459,-57.60938 -28.50547,-57.54432 -28.48477)),((-57.1953 -28.55179,-57.31903 -28.60885,-57.48205 -28.62271,-57.48166 -28.64784,-57.43567 -28.66125,-57.42996 -28.72571,-57.34189 -28.70457,-57.28101 -28.72201,-57.23382 -28.69781,-57.20839 -28.71374,-57.1953 -28.55179)),((-57.81308 -28.47094,-57.79957 -28.48902,-57.75527 -28.46532,-57.76465 -28.50981,-57.71761 -28.51786,-57.68946 -28.44909,-57.67453 -28.43487,-57.67319 -28.46071,-57.64173 -28.43247,-57.65016 -28.40329,-57.70566 -28.39871,-57.64366 -28.39128,-57.64202 -28.34755,-57.78412 -28.42453,-57.80051 -28.46849,-57.83553 -28.42378,-57.81308 -28.47094)),((-57.10214 -28.06092,-57.13642 -28.07295,-57.10843 -28.10492,-57.10214 -28.06092)),((-56.81502 -27.86261,-56.8129 -27.82946,-56.83878 -27.81266,-56.91344 -27.90193,-56.97594 -27.89529,-56.98421 -27.87337,-57.02322 -27.88207,-57.04728 -27.94116,-57.0911 -27.91787,-57.10034 -28.07181,-57.08291 -28.08547,-57.01218 -28.04511,-57.01624 -27.95567,-56.99155 -27.97201,-57.00186 -28.02528,-56.90327 -27.96486,-56.83789 -27.96654,-56.82482 -27.94586,-56.86315 -27.89571,-56.83293 -27.90199,-56.82357 -27.93509,-56.81502 -27.86261)))",
 "EventDate is less than or equal to 2021-07-01",
 "EventDate is greater than or equal to 2021-06-01"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0314782-200613084148143/datasets/export for details.
DOI: 10.15468/dl.unmcal
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spermophilus annulatus Audubon & Bachman, 1842",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 101 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009714-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uyny32
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Spain",
 "Country is Portugal"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Acrocordia cavata (Ach.) R.C.Harris"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000228-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pvxp6s
title: Occurrence Download

description: A dataset containing 3571 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lathyrus japonicus Willd.",
 "MediaType is Image",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 3571 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001393-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pz43a5
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Callicarpa anomala (Ridl.) B.L.Burtt"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0283901-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4di63r
title: Occurrence Download

description: A dataset containing 303286 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 2000-2018",
 "Geometry POLYGON((11.86523 -3.86425,11.86523 -6.48998,19.95117 -11.69527,29.79492 -13.75272,35.24414 -7.71099,34.18945 -2.98693,31.72852 -2.98693,32.25586 3.86425,22.93945 9.96885,12.2168 5.61599,11.86523 -3.86425))",
 "HasCoordinate is true",
 "TaxonKey is Animalia",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 303286 records from 145 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009714-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q2c3u8
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Caligus lagocephali Pillai N.K., 1961)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051146-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3mexgg
title: Occurrence Download

description: A dataset containing 870 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ardisia crenata Sims"
 ]
}

 The dataset includes 870 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228362-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cpajed
title: Occurrence Download

description: A dataset containing 225908 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is The molluscs collection (IM) of the Muséum national d'Histoire naturelle (MNHN - Paris)"
 ]
}

 The dataset includes 225908 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0320645-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hzwyfg
title: Occurrence Download

description: A dataset containing 118114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is COL",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 118114 records from 311 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0303377-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.petkxh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lecanora muralis",
 "MediaType is Image",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001415-210914110416597/datasets/export for details.
DOI: 10.15468/dl.k6pswo
title: Occurrence Download

description: A dataset containing 308 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Dominican Republic",
 "TaxonKey is Goniopteris C.Presl"
 ]
}

 The dataset includes 308 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009714-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yxnfwy
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Haplotinea ditella (Pierce et al., 1938)"
 ]
}

 The dataset includes 11 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228310-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jvhntn
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Kazakhstan",
 "Country is Uzbekistan",
 "Country is Kyrgyzstan"
 ]
 },
 "TaxonKey is Tulipa kaufmanniana Regel"
 ]
}

 The dataset includes 33 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0311470-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.stku6m
title: Occurrence Download

description: A dataset containing 65 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Picea jezoensis (Siebold & Zucc.) Carrière"
 ]
}

 The dataset includes 65 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0253994-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uaj6hj
title: Occurrence Download

description: A dataset containing 1535 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centurio senex Gray, 1842"
 ]
}

 The dataset includes 1535 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009714-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cysxrm
title: Occurrence Download

description: A dataset containing 309 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Glochidion eriocarpum Zipp. ex Span., 1841"
 ]
}

 The dataset includes 309 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228311-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.efq5p6
title: Occurrence Download

description: A dataset containing 512 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "OccurrenceStatus is Present",
 "TaxonKey is Dracula Luer"
 ]
}

 The dataset includes 512 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051148-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3p8h2n
title: Occurrence Download

description: A dataset containing 3874 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gobiosoma bosc (Lacepède, 1800)"
 ]
}

 The dataset includes 3874 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228327-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c0njyv
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Tithonia diversifolia (Hemsl.) A.Gray"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009715-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jbn3er
title: Occurrence Download

description: A dataset containing 13182 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bactrocera dorsalis (Hendel, 1912)"
 ]
}

 The dataset includes 13182 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0281312-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sa9n78
title: Occurrence Download

description: A dataset containing 1018 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2024",
 "Geometry POLYGON ((-130.7383528944533 -59.46314024951374, -130.7383528944533 32.71876227804215, -26.26729810228821 32.71876227804215, -26.26729810228821 -59.46314024951374, -130.7383528944533 -59.46314024951374))",
 "OccurrenceStatus is Present",
 "TaxonKey is Formicivora iheringi Hellmayr, 1909"
 ]
}

 The dataset includes 1018 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051147-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sqzycq
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alcea longipedicellata Rilke"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024981-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6fwf66
title: Occurrence Download

description: A dataset containing 53885 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ricinus communis L."
 ]
}

 The dataset includes 53885 records from 783 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0177826-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tu3dcq
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.28_1",
 "TaxonKey is Crepis tianshanica"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008369-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1hdmeq
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014053-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dljr0e
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017133-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yyr3iy
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079539-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sqw567
title: Occurrence Download

description: A dataset containing 87446967 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Germany, Switzerland, Slovakia, Czechia, Poland, Liechtenstein, Luxembourg, Italy, Hungary, Slovenia)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 87446967 records from 5159 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0223439-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15789545
title: Native MS dataset for: "De-novo heterozygous variants in EHMT2 genocopy Kleefstra syndrome via a loss of G9a methyltransferase activity"

description: Native mass spectrometry dataset used in: De-novo heterozygous variants in EHMT2 genocopy Kleefstra syndrome via a loss of G9a methyltransferase activity. A. Hnizda, B. Martinez-Delgado et al. XXX (YYYY)

 

Description:

Native mass spectrometry (MS) analysis of the oligomeric state as well as histone H3 peptide / SAM cofactor binding to patient-derived GLP and G9a protein variants.

Sample processing:

Recombinant G9a and GLP variants were first transferred into 150 mM ammonium acetate pH 7.5 containing 0.5 mM DTT by one or two cycles of spin gel filtration (Micro Bio-Spin P-6 Gel columns, 6-kDa cut off; Bio-Rad). Next, the protein samples were diluted to 5 μM concentration, optionally mixed with SAM or histone H3 peptide in an equimolar ratio, and incubated for 10 min at 4 °C. The samples were electrosprayed into a Synapt G2Si instrument (Waters) at 0.9-1.2 kV from an in-house prepared borosilicate glass spraying tips (10.1038/nprot.2007.73) (Kwik-Fil 1B120F-4, World Precision Instruments) pulled with P-97 platinum-wire Flaming/Brown Micropipette puller (Sutter Instrument) and coated with 40 nm thick layer of gold using an ACE600 sputter coater (Leica). Data acquisition was performed in positive ionization sensitivity mode. For assessing the dimerization and substrate binding of the G9a and GLP variants, the trap collision energy was optimized to maximize sensitivity while keeping ion activation minimal at 10 V and 40 V, respectively. The argon flow as collision gas was maintained at 6 ml/min, sampling cone voltage set to 80 V, source offset to 0 V, and source temperature to 80 °C. Quadrupole was operated in broad transmission mode up to 4000 m/z.

Data processing:

Acquired data were externally mass recalibrated on caesium iodide clusters, summed over 50 scans, and smoothed using two passes of Savitzky-Golay filtering (window 50 scans) (10.1021/ac60214a047) in MassLynx 4.1 (Waters). Subsequently, mass deconvolution of the spectra was performed in UniDec v6.0.4 (10.1021/acs.analchem.5b00140). Additionally, spectra were background-subtracted in UniDec v6.0.4 and used to quantify the monomer-dimer distribution of the analysed proteins in their apo-form. The averaged spectra were exported for ZENODO deposition as plain in plain intensity vs m/z .txt files and also uploaded as part of the .raw file format of the whole analysis (including initial metadata) with scan descriptions and parameter changes described in a stand-alone .txt descriptor file.
DOI: 10.5281/zenodo.15789546
title: Native MS dataset for: "De-novo heterozygous variants in EHMT2 genocopy Kleefstra syndrome via a loss of G9a methyltransferase activity"

description: Native mass spectrometry dataset used in: De-novo heterozygous variants in EHMT2 genocopy Kleefstra syndrome via a loss of G9a methyltransferase activity. A. Hnizda, B. Martinez-Delgado et al. XXX (YYYY)

 

Description:

Native mass spectrometry (MS) analysis of the oligomeric state as well as histone H3 peptide / SAM cofactor binding to patient-derived GLP and G9a protein variants.

Sample processing:

Recombinant G9a and GLP variants were first transferred into 150 mM ammonium acetate pH 7.5 containing 0.5 mM DTT by one or two cycles of spin gel filtration (Micro Bio-Spin P-6 Gel columns, 6-kDa cut off; Bio-Rad). Next, the protein samples were diluted to 5 μM concentration, optionally mixed with SAM or histone H3 peptide in an equimolar ratio, and incubated for 10 min at 4 °C. The samples were electrosprayed into a Synapt G2Si instrument (Waters) at 0.9-1.2 kV from an in-house prepared borosilicate glass spraying tips (10.1038/nprot.2007.73) (Kwik-Fil 1B120F-4, World Precision Instruments) pulled with P-97 platinum-wire Flaming/Brown Micropipette puller (Sutter Instrument) and coated with 40 nm thick layer of gold using an ACE600 sputter coater (Leica). Data acquisition was performed in positive ionization sensitivity mode. For assessing the dimerization and substrate binding of the G9a and GLP variants, the trap collision energy was optimized to maximize sensitivity while keeping ion activation minimal at 10 V and 40 V, respectively. The argon flow as collision gas was maintained at 6 ml/min, sampling cone voltage set to 80 V, source offset to 0 V, and source temperature to 80 °C. Quadrupole was operated in broad transmission mode up to 4000 m/z.

Data processing:

Acquired data were externally mass recalibrated on caesium iodide clusters, summed over 50 scans, and smoothed using two passes of Savitzky-Golay filtering (window 50 scans) (10.1021/ac60214a047) in MassLynx 4.1 (Waters). Subsequently, mass deconvolution of the spectra was performed in UniDec v6.0.4 (10.1021/acs.analchem.5b00140). Additionally, spectra were background-subtracted in UniDec v6.0.4 and used to quantify the monomer-dimer distribution of the analysed proteins in their apo-form. The averaged spectra were exported for ZENODO deposition as plain in plain intensity vs m/z .txt files and also uploaded as part of the .raw file format of the whole analysis (including initial metadata) with scan descriptions and parameter changes described in a stand-alone .txt descriptor file.