cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25740/mk782vn8293
title: SEDA 3.0

description: ***More recent versions of the Stanford Education Data Archive data are available. Search the Stanford Digital Repository or visit www.edopportunity.org to find the latest version.*** 

 

The Stanford Education Data Archive (SEDA) is an initiative aimed at harnessing data to help researchers, policymakers, educators, and parents learn how to improve educational opportunity for all children. SEDA is publicly available and includes measures of academic achievement, racial and socioeconomic composition and segregation, and other features of the schooling system. These data can be used to generate evidence about what policies and contexts are most effective at increasing educational opportunity. 

 

SEDA 3.0 was published in September 2019 and includes a range of detailed data on educational conditions, contexts, and outcomes in schools and school districts across the United States for the 2008/09 to 2015/16 school years. This was the first release to include school-level estimates.  

 

***Errata: On 09/21/2023 errors were identified in some of the original data files. The following files are no longer available: 

seda_county_poolsub_cs_v30 

seda_county_poolsub_gcs_v30  

seda_commzone_poolsub_cs_v30  

seda_commzone_poolsub_gcs_v30 

seda_geodist_poolsub_cs_v30 

seda_geodist_poolsub_gcs_v30 

seda_metro_poolsub_cs_v30 

seda_metro_poolsub_gcs_v30 

seda_school_poolsub_cs_v30 

seda_school_poolsub_gcs_v30 

Please delete any locally stored copies of these files. 

 

DATA USE AGREEMENT: 

 

You agree not to use the data sets for commercial advantage, or in the course of for-profit activities. Commercial entities wishing to use this Service should contact Stanford University’s Office of Technology Licensing (info@otlmail.stanford.edu). 

You agree that you will not use these data to identify or to otherwise infringe the privacy or confidentiality rights of individuals. 

 

THE DATA SETS ARE PROVIDED “AS IS” AND STANFORD MAKES NO REPRESENTATIONS AND EXTENDS NO WARRANTIES OF ANY KIND, EXPRESS OR IMPLIED. STANFORD SHALL NOT BE LIABLE FOR ANY CLAIMS OR DAMAGES WITH RESPECT TO ANY LOSS OR OTHER CLAIM BY YOU OR ANY THIRD PARTY ON ACCOUNT OF, OR ARISING FROM THE USE OF THE DATA SETS. 

 

You agree that this Agreement and any dispute arising under it is governed by the laws of the State of California of the United States of America, applicable to agreements negotiated, executed, and performed within California. 

 

You agree to acknowledge the Stanford Education Data Archive as the source of these data. In publications, please cite the data as: 

 

Reardon, S. F., Ho, A. D., Shear, B. R., Fahle, E. M., Kalogrides, D., Jang, H., Chavez, B., Buontempo, J., & DiSalvo, R. (2019). Stanford Education Data Archive (Version 3.0). [https://purl.stanford.edu/mk782vn8293] [https://doi.org/10.25740/mk782vn8293]

 

Subject to your compliance with the terms and conditions set forth in this Agreement, Stanford grants you a revocable, non-exclusive, non-transferable right to access and make use of the Data Sets.
DOI: 10.3535/063-qse-gbr
title: Gastrosaccus spinifer (Goës, 1863)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9ar-4yy-jem
title: Xanthocalanus Giesbrecht, 1893

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ecp-jwx-87q
title: Gastrosaccus spinifer (Goës, 1863)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25740/jm728cq7283
title: SEDA2022 1.0

description: The Stanford Education Data Archive (SEDA) is an initiative aimed at harnessing data to help researchers, policymakers, educators, and parents learn how to improve educational opportunity for all children. SEDA is publicly available and includes measures of academic achievement, racial and socioeconomic composition and segregation, and other features of the schooling system. These data can be used to generate evidence about what policies and contexts are most effective at increasing educational opportunity.

The SEDA 2022 dataset is unique from other versions of SEDA. SEDA 2022 1.0, includes district-level data for a subset of states on the average math and reading achievement in 2019 and 2022 respectively, and the change in math and reading achievement between 2019 and 2022 relative to the national average in grades 3-8 in 2019. 

More recent versions of the SEDA2022 data are available. To find the current version of the data, please visit: www.edopportunity.org/get-the-data.  

DATA USE AGREEMENT: 

 

You agree not to use the data sets for commercial advantage, or in the course of for-profit activities. Commercial entities wishing to use this Service should contact Stanford University’s Office of Technology Licensing (info@otlmail.stanford.edu). 

You agree that you will not use these data to identify or to otherwise infringe the privacy or confidentiality rights of individuals. 

 

THE DATA SETS ARE PROVIDED “AS IS” AND STANFORD MAKES NO REPRESENTATIONS AND EXTENDS NO WARRANTIES OF ANY KIND, EXPRESS OR IMPLIED. STANFORD SHALL NOT BE LIABLE FOR ANY CLAIMS OR DAMAGES WITH RESPECT TO ANY LOSS OR OTHER CLAIM BY YOU OR ANY THIRD PARTY ON ACCOUNT OF, OR ARISING FROM THE USE OF THE DATA SETS. 

 

You agree that this Agreement and any dispute arising under it is governed by the laws of the State of California of the United States of America, applicable to agreements negotiated, executed, and performed within California. 

 

You agree to acknowledge the Stanford Education Data Archive as the source of these data. In publications, please cite the data as: 

 

Reardon, S. F., Fahle, E. M., Ho, A. D., Shear, B. R., Kalogrides, D., Saliba, J., & Kane, T.J. (2022). Stanford Education Data Archive (Version SEDA 2022 1.0). [https://purl.stanford.edu/jm728cq7283] [https://doi.org/10.25740/jm728cq7283]

 

Subject to your compliance with the terms and conditions set forth in this Agreement, Stanford grants you a revocable, non-exclusive, non-transferable right to access and make use of the Data Sets.
DOI: 10.25740/ss974md4840
title: Data in support of 'Isotopomer labeling and oxygen dependence of hybrid nitrous oxide production' from the Eastern Tropical North Pacific

description: Raw data used to compute rates of ammonia oxidation, nitrite oxidation, nitrate reduction, and nitrous oxide production in the Eastern Tropical North Pacific oxygen deficient zone. Metadata for sampling and incubation.
DOI: 10.3535/00q-8zz-5h0
title: Gastrosaccus spinifer (Goës, 1863)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3cz-4vx-574
title: Gastrosaccus spinifer (Goës, 1863)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25740/dt080zr0625
title: SEDA2022 2.0

description: The Stanford Education Data Archive (SEDA) is an initiative aimed at harnessing data to help researchers, policymakers, educators, and parents learn how to improve educational opportunity for all children. SEDA is publicly available and includes measures of academic achievement, racial and socioeconomic composition and segregation, and other features of the schooling system. These data can be used to generate evidence about what policies and contexts are most effective at increasing educational opportunity. 

  

The SEDA 2022 dataset is unique from other versions of SEDA. SEDA 2022 2.0, includes district-level data for a subset of states on the average math and reading achievement in 2019 and 2022 respectively, and the change in math and reading achievement between 2019 and 2022 relative to the national average in grades 3-8 in 2019.

 

DATA USE AGREEMENT: 

 

You agree not to use the data sets for commercial advantage, or in the course of for-profit activities. Commercial entities wishing to use this Service should contact Stanford University’s Office of Technology Licensing (info@otlmail.stanford.edu). 

You agree that you will not use these data to identify or to otherwise infringe the privacy or confidentiality rights of individuals. 

 

THE DATA SETS ARE PROVIDED “AS IS” AND STANFORD MAKES NO REPRESENTATIONS AND EXTENDS NO WARRANTIES OF ANY KIND, EXPRESS OR IMPLIED. STANFORD SHALL NOT BE LIABLE FOR ANY CLAIMS OR DAMAGES WITH RESPECT TO ANY LOSS OR OTHER CLAIM BY YOU OR ANY THIRD PARTY ON ACCOUNT OF, OR ARISING FROM THE USE OF THE DATA SETS. 

 

You agree that this Agreement and any dispute arising under it is governed by the laws of the State of California of the United States of America, applicable to agreements negotiated, executed, and performed within California. 

 

You agree to acknowledge the Stanford Education Data Archive as the source of these data. In publications, please cite the data as: 

 

Reardon, S. F., Fahle, E. M., Ho, A. D., Shear, B. R., Kalogrides, D., Saliba, J., & Kane, T. J. (2023). Stanford Education Data Archive (Version SEDA2022 2.0). [https://purl.stanford.edu/dt080zr0625] [https://doi.org/10.25740/dt080zr0625]

 

Subject to your compliance with the terms and conditions set forth in this Agreement, Stanford grants you a revocable, non-exclusive, non-transferable right to access and make use of the Data Sets.
DOI: 10.3535/qpf-tv7-ypb
title: Lepeophtheirus thompsoni Baird, 1850

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v1m-3dd-py0
title: Euchaeta spinosa Giesbrecht, 1893

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/73c-w6f-m8x
title: Euchirella rostrata (Claus, 1866)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qtx-kfw-00g
title: Canuella perplexa Scott T. & Scott A., 1893

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7z4-k7t-e86
title: Lepeophtheirus pectoralis (Müller O.F., 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.b2wnyb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "ScientificName" : [
 "is Fejervarya limnocharis"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102920-250525065834625/datasets/export for details.
DOI: 10.3535/zjt-xdp-y4c
title: Clavella uncinata (Müller O.F., 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.ah4ega
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sporobolus diandrus (Retz.) P.Beauv.",
 "Country is Niue",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102919-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/4tf-0aw-9r5
title: Euchirella splendens Vervoort, 1963

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6mt-fd3-4sg
title: Lepeophtheirus thompsoni Baird, 1850

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25740/hd388xb1982
title: RSV concentrations in wastewater solids across the United States during the 2022-2023 RSV eason

description: Concentrations of RSV and PMMoV across 176 US sites in the 2022-2023 RSV season
DOI: 10.25740/sh041sv7899
title: SARS-CoV-2 RNA and PMMoV RNA concentration in California Wastewater solids

description: This is data that supports the paper called A Mixed-Effects Model to Predict COVID-19 Hospitalizations Using Wastewater Surveillance
DOI: 10.3535/6yy-6wv-nv8
title: Tethysbaena barbatula Wagner, 2020

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kc2-dq4-8xy
title: Gaetanus latifrons Sars G.O., 1905

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.392bde
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sporobolus diandrus (Retz.) P.Beauv.",
 "Country is Palau",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102921-250525065834625/datasets/export for details.
DOI: 10.25740/kv702yw2050
title: Data from figures of 'Giant elastocaloric effect at low temperatures in TmVO$_4$ and implications for cryogenic cooling'

description: Data from calculations (entropy) and measurements (AC elastocaloric effect, ultrasound) related to the giant elastocaloric effect present in TmVO$_4$ as displayed in the figures of 'Giant elastocaloric effect at low temperatures in TmVO$_4$ and implications for cryogenic cooling'.
DOI: 10.3535/se9-4xh-r01
title: Clavella uncinata (Müller O.F., 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7vb-5vr-rbn
title: Temora longicornis (Müller O.F., 1785)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9s0-se9-mrh
title: Praunus neglectus (G. O. Sars, 1869)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25740/vc403cg8437
title: CR_quant

description: Gold standard immunoassays depend on specific affinity reagents for accurate molecular quantification. Any cross-reactivity of affinity reagents, wherein the reagent non-specifically binds to unintended molecules, can create false positive binding signals and result in inaccurate quantification of analytes. Mitigating cross-reactivity represents one of the greatest challenges in molecular diagnostics, and remains an unsolved problem.
To instead overcome the effects of cross-reactivity, we present a mathematical framework that uses generalized binding equations and noise estimation to enable the use of multiple cross-reactive reagents for multiplexed molecular quantification. As a proof-of-concept, we experimentally demonstrate accurate quantification of a small molecule for which no specific affinity reagents are available, even at high concentrations of a cross-reactive molecule. Furthermore, this robust schema yields well-defined bounds of quantification that make it easier to assess the quality of assay results and predicts under which conditions assay performance is likely to break down. This work turns cross-reactive affinity reagents, which were previously a liability, into an asset for achieving accurate quantification of analytes.
DOI: 10.3535/6a0-tme-w1j
title: Neomysis integer (Leach, 1815)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25740/qk835gk4326
title: Ephys data for Park IJMS 2021

description: Fragile X syndrome (FXS) is an X-chromosome-linked neurodevelopmental disorder with severe intellectual disability caused by inactivation of the fragile X mental retardation 1 (FMR1) gene and subsequent loss of the fragile X mental retardation protein (FMRP).  Among the various types of abnormal synaptic function and synaptic plasticity phenotypes reported in FXS animal models, defective synaptic retinoic acid (RA) signaling and subsequent defective homeostatic plasticity have emerged as a major synaptic dysfunction. However, the mechanism underlying the defective synaptic RA signaling in the absence of FMRP is unknown. Here we show that RAR, the RA receptor critically involved in synaptic RA signaling, directly interacts with FMRP. This interaction is enhanced in the presence of RA. Blocking the interaction between FMRP and RAR with a small peptide corresponding to the critical binding site in RAR abolishes RA-induced increases in excitatory synaptic transmission, recapitulating the phenotype seen in the Fmr1 knockout mouse. Taken together, these data suggest that not only are functional FMRP and RAR necessary for RA-dependent homeostatic synaptic plasticity, but that the interaction between these two proteins is essential for proper transcription-independent RA signaling. Our results may provide further mechanistic understanding into FXS synaptic pathophysiology.
DOI: 10.25740/yf106cj5998
title: A cluster of neuropeptide S neurons regulates breathing and arousal

description: Neuropeptide S (NPS) is a highly conserved peptide found in all tetrapods that functions in the brain to promote heightened arousal; however, the subpopulations mediating these phenomena remain unknown. We generated mice expressing Cre recombinase from the Nps gene locus (NpsCre) and examined populations of NPS+ neurons in the lateral parabrachial area (LPBA), the peri-locus coeruleus (peri-LC) region of the pons, and the dorsomedial thalamus (DMT). We performed brain-wide mapping of input and output regions of NPS+ clusters and characterized expression patterns of the NPS receptor (NPSR1). While the activity of all three NPS+ subpopulations tracked with vigilance state, only NPS+ neurons of the LPBA exhibited both increased activity prior to wakefulness and decreased activity during REM sleep, similar to the behavioral phenotype observed upon NPSR1 activation. Accordingly, we found that activation of LPBA, but not peri-LC NPS+ neurons increased wake and reduced REM sleep. Furthermore, given the extended role of the LPBA in respiration, and the link between behavioral arousal and breathing rate, we demonstrated that LPBA-, but not peri-LC-NPS+ neuronal activation increased respiratory rate. Together, our data suggests that NPS+ neurons of the LPBA represent an unexplored subpopulation regulating breathing and they are sufficient to recapitulate the sleep/wake phenotypes observed with broad NPS system activation.
DOI: 10.3535/e2v-h03-z3m
title: Praunus flexuosus (O. F. Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zqr-zkr-svx
title: Praunus flexuosus (O. F. Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3f0-v9e-9nr
title: Gastrosaccus spinifer (Goës, 1863)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qhg-xvp-e8q
title: Gnathophausia zoea Willemoes-Suhm, 1873

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25740/ct843nw2177
title: Anomalous normal state gap in an electron-doped cuprate

description: In the underdoped n-type cuprate Nd2-xCexCuO4, long-ranged antiferromagnetic order reconstructs the Fermi surface, resulting in a putative antiferromagnetic metal with small pockets. Using angle-resolved photoemission spectroscopy, we observe an anomalous energy gap, an order of magnitude smaller than the antiferromagnetic gap, in a wide range of the underdoped regime and smoothly connecting to the superconducting gap at optimal doping. After carefully considering all the known ordering tendencies in tandem with the phase diagram, we hypothesize that the normal state gap in the underdoped n-type cuprates originates from Cooper pairing. The high temperature scale of the normal state gap raises the prospect of engineering higher transition temperatures in the n-type cuprates comparable to that of the p-type cuprates.
DOI: 10.3535/5lz-shw-zlh
title: Siriella jaltensis Czerniavsky, 1868

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gxp-aar-yjp
title: Gnathophausia zoea Willemoes-Suhm, 1873

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25740/bk028tz1725
title: Krill and Lagrangian Features data archive

description: These files allow for the reproducibility of the analysis in the manuscript "Submesoscale coupling of krill and whales revealed by aggregative Lagrangian coherent structures".
rawData.zip includes files and folders that comprise the raw data used in the manuscript
Models.zip contains the Generalized Linear Mixed Effects Models produced in the analysis of the manuscript
DOI: 10.3535/0qr-gvy-n1x
title: Mesopodopsis slabberi (Van Beneden, 1861)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w11-2kz-09l
title: Diamysis bahirensis (G. O. Sars, 1877)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25740/pt793hc6962
title: App for Ca2+-imaging signals in cultured neurons

description: Calcium Imaging Code by Zijun Sun
DOI: 10.3535/38a-5dx-jkh
title: Neognathophausia gigas (Willemoes-Suhm, 1873)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25740/rg880ws3662
title: xPlex

description: Changes in metabolite concentrations are often more drastic than changes in gene and protein expression levels, and thus they could provide a highly sensitive measure of disease or therapeutic status. Multiplexed quantification of small molecules has been challenging due to high background signal, limited readout mechanisms, and signal cross-over. Here, we introduce an aptamer-based assay that quantifies small molecules with low background and high multiplexing capabilities by mapping small molecules to DNA aptamers for quantification via high throughput sequencing. In a proof-of-concept example, we show that we can quantify mixtures of small molecules via next generation sequencing, and that it is highly amenable for characterization of SELEX schemas in high-throughput.
DOI: 10.3535/7x2-1k3-jw7
title: Euchirella bitumida With, 1915

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pg4-h3d-m7j
title: Tethysbaena tarsiensis Wagner, 1994

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.15826763
title: PyMT_Proliferation-Tracing-and-Ablation

description: We employed a dual recombinase-mediated genetic system to genetically trace and ablate proliferating cells in a Polyoma Virus middle T antigen (PyMT)-induced spontaneous murine breast cancer model. We then applied single-cell RNA sequencing (scRNA-seq) to unbiasedly compare the tumor ecosystems of the primary and relapsed PyMT tumors.
DOI: 10.5281/zenodo.15826764
title: PyMT_Proliferation-Tracing-and-Ablation

description: We employed a dual recombinase-mediated genetic system to genetically trace and ablate proliferating cells in a Polyoma Virus middle T antigen (PyMT)-induced spontaneous murine breast cancer model. We then applied single-cell RNA sequencing (scRNA-seq) to unbiasedly compare the tumor ecosystems of the primary and relapsed PyMT tumors.
DOI: 10.3535/rsz-c5y-z0k
title: Neomysis integer (Leach, 1815)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rws-wqq-swk
title: Gastrosaccus spinifer (Goës, 1863)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c4v-xbv-w80
title: Mesopodopsis slabberi (Van Beneden, 1861)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h8f-khj-fdf
title: Gastrosaccus spinifer (Goës, 1863)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ajf-5ry-nkd
title: Euchirella bitumida With, 1915

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.