cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21227/0r3g-cs83
title: The Earth Rover dataset recorded at the ICRA@40 party

description: The ICRA conference is celebrating its 40th anniversary in Rotterdam in September 2024, with as highlight the Happy Birthday ICRA Party at the iconic Holland America Line Cruise Terminal. One month later the IROS conference will take place, which will include the Earth Rover Challenge. In this challenge open-world autonomous navigation models are studied truly open-world settings.As part of the Earth Rover Challenge several real-world navigation sets in several cities world-wide, like Auckland, Australia and Wuhan, China. This dataset recorded in the Rotterdam, the Netherlands. The recording took place in front of the Holland America Line Cruise Terminal, before the festivities of the Happy Birthday ICRA Party start. The dataset is quite unique, because n asynchronous multithreading script has been used for the recording, which provided a higher frequency of reading out accelerometers than other data sets recorded with Earth Rovers.
DOI: 10.25345/c5nk36h32
title: MassIVE MSV000095998 - Epigenetic silencing of tight junction protein CLDN10B in renal cancer including post-transplantation RCC and its endogenous reactivation by CRISPR results in cell growth suppression.
title: Background The kidney's tubular system, composed of nephrons and collecting ducts, relies on cellular planar polarity and tight junctions to maintain structure and function. Disruptions in this polarity contribute to diseases like cystic kidney disease and cancer. Tight junctions, such as those formed by Claudin proteins, are critical for cellular polarity and tissue organization. Therefore, epigenetically inactivated Claudins can actively contribute to tumorigenesis. Results In this study, we identified the epigenetic silencing of Claudin 10B (CLDN10B) through DNA hypermethylation in renal cancers, including clear cell renal carcinoma (ccRCC) and post-transplantation malignancies (PT-RCC). Hypermethylation selectively affected CLDN10B, while the related isoform, CLDN10A, was hypomethylated in clear cell and papillary RCC. Differential methylation of the Isoforms can serve as a discriminator of RCC from other malignancies. The epigenetic alteration of CLDN10B significantly correlated with reduced patient survival and advanced tumor staging. CLDN10B overexpression and CLDN10B induction via an inducible cell line significantly inhibited migration, cell cycle progression, and cellular growth. We further investigated CLDN10B using CRISPR-based epigenetic editing to reactivate CLDN10B to its endogenous level. Targeting the CLDN10B promoter with VP160 and TET1 in a dCas9-system effectively demethylated, significantly restored its expression and demonstrated its tumor-suppressive effects in 2D and 3D cell models. Conclusion Our findings suggest that CLDN10B acts as a tumor suppressor, and its epigenetic regulation may represent a therapeutic target. Ultimately, understanding CLDN10Bs regulation and function could provide new insights into renal cancer treatment.
DOI: 10.34965/i32685
title: Fe_dataset_delete
DOI: 10.5518/90
title: Data associated with “The Influence of Malalignment and Ageing Following Sterilisation by Gamma Irradiation in an Inert Atmosphere on the Wear of UHMWPE in Patella-Femoral Replacements”.

description: The dataset contains material to supplement the paper “The Influence of Malalignment and Ageing Following Sterilisation by Gamma Irradiation in an Inert Atmosphere on the Wear of UHMWPE in Patella-Femoral Replacements” including: wear rates of UHMWPE patellae, surface roughness of patellae using the contacting Form Talysurf and analysis of the size of the wear scars.
DOI: 10.34740/kaggle/dsv/9523551
title: Public Opinion on Climate Change (Updated Daily)
DOI: 10.6092/unibo/amsacta/7896
title: IDENTITIES. Transcripts from two study groups on the role of complexity and uncertainty in learning about climate change in an interdisciplinary contexts

description: The data presented have been collected in the framework of the Erasmus+ “IDENTITIES” project. In the project, a framework for interdisciplinarity was designed to innovate pre-service teachers (PSTs) education. The dataset contains transcripts from two sessions of the second Summer School held within the project at the University of Barcelona from June 27th to July 1st 2022. The Summer School was attended by PreService Teachers from the universities who participated in the IDENTITIES project (University of Barcelona, University of Bologna, University of Crete, University of Parma and University of Montpellier). All the PSTs were Master Students enrolled in a course for PSTs from Physics, Mathematics or Computer Science curricula. 

The Summer School proposed two different types of topics: advanced STEM topics (“Climate Change” and “Modelling COVID”) and interdisciplinary curricular topics (“Cryptography” and “Linguistic and Epistemologic aspects of Interdisciplinarity”). The dataset contains the anonymous transcriptions of the discussions that 14 PSTs had while conducting the activities presented in the Climate Change module. In particular the data were collected during the third and fourth part of the module, where PSTs were asked to reflect on the concepts of complexity and to work with the different types of uncertainties. The data has been recorded, transcribed, and then transformed into an xlsx file for readability.
DOI: 10.15468/dl.q6svxf
title: Occurrence Download

description: A dataset containing 2857573431 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2857573431 records from 64692 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036580-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10143377
title: Genomic Epidemiology Dataset for Important Nosocomial Pathogenic Bacteria Acinetobacter baumannii
title: Typing data for 17,546 A. baumannii genomes from Genbank

description: The infections caused by various bacterial pathogens both in clinical and community settings represent a significant threat to public healthcare worldwide. The growing resistance to antimicrobial drugs acquired by bacterial species causing healthcare-associated infections has already become a life-threatening danger noticed by the World Health Organization. Several groups or lineages of bacterial isolates usually called 'the clones of high risk' often drive the spread of resistance within particular species. 
Thus, it is vitally important to reveal and track the spread of such clones and the mechanisms by which they acquire antibiotic resistance and enhance their survival skills. Currently, the analysis of whole genome sequences for bacterial isolates of interest is increasingly used for these purposes, including epidemiological surveillance and developing of spread prevention measures. However, the availability and uniformity of the data derived from the genomic sequences often represents a bottleneck for such investigations. 
In this dataset, we present the results of a comprehensive genomic epidemiology analysis of 17,546 genomes of a dangerous bacterial pathogen Acinetobacter baumannii. Important typing information including multilocus sequence typing (MLST)-based sequence types (STs), intrinsic blaOXA-51-like gene variants, capsular (KL) and oligosaccharide (OCL) types, CRISPR-Cas systems, and cgMLST profiles are presented, as well as the assignment of particular isolates to nine known international clones of high risk. The presence of antimicrobial resistance genes within the genomes is also reported. 
These data will be useful for researchers in the field of A. baumannii genomic epidemiology, resistance analysis and prevention measure development.
DOI: 10.5281/zenodo.10143378
title: Genomic Epidemiology Dataset for Important Nosocomial Pathogenic Bacteria Acinetobacter baumannii
title: Typing data for 17,546 A. baumannii genomes from Genbank

description: The infections caused by various bacterial pathogens both in clinical and community settings represent a significant threat to public healthcare worldwide. The growing resistance to antimicrobial drugs acquired by bacterial species causing healthcare-associated infections has already become a life-threatening danger noticed by the World Health Organization. Several groups or lineages of bacterial isolates usually called 'the clones of high risk' often drive the spread of resistance within particular species. 
Thus, it is vitally important to reveal and track the spread of such clones and the mechanisms by which they acquire antibiotic resistance and enhance their survival skills. Currently, the analysis of whole genome sequences for bacterial isolates of interest is increasingly used for these purposes, including epidemiological surveillance and developing of spread prevention measures. However, the availability and uniformity of the data derived from the genomic sequences often represents a bottleneck for such investigations. 
In this dataset, we present the results of a comprehensive genomic epidemiology analysis of 17,546 genomes of a dangerous bacterial pathogen Acinetobacter baumannii. Important typing information including multilocus sequence typing (MLST)-based sequence types (STs), intrinsic blaOXA-51-like gene variants, capsular (KL) and oligosaccharide (OCL) types, CRISPR-Cas systems, and cgMLST profiles are presented, as well as the assignment of particular isolates to nine known international clones of high risk. The presence of antimicrobial resistance genes within the genomes is also reported. 
These data will be useful for researchers in the field of A. baumannii genomic epidemiology, resistance analysis and prevention measure development.
DOI: 10.5281/zenodo.5494451
title: Temperature effects on the distribution of aragonitic and calcite-secreting epifaunal bivalves

description: This dataset contains the necessary data and code to reproduce the analyses shown in the manuscript "Temperature effects on the distribution of aragonitic and calcite-secreting epifaunal bivalves".

To prepare the OBIS data from the original download for the analysis, using R, it is necessary to 1. deposit the files in the "data" folder in the R working directory, 2. run the script "worms_prepare.R", 3. run the script "obis_data_prepare.R".

To directly run the analyses with the cleaned data set, proceed from 1. with the R scripts corresponding to the figures shown in the manuscript.
DOI: 10.5281/zenodo.5494452
title: Temperature effects on the distribution of aragonitic and calcite-secreting epifaunal bivalves

description: This dataset contains the necessary data and code to reproduce the analyses shown in the manuscript "Temperature effects on the distribution of aragonitic and calcite-secreting epifaunal bivalves".

To prepare the OBIS data from the original download for the analysis, using R, it is necessary to 1. deposit the files in the "data" folder in the R working directory, 2. run the script "worms_prepare.R", 3. run the script "obis_data_prepare.R".

To directly run the analyses with the cleaned data set, proceed from 1. with the R scripts corresponding to the figures shown in the manuscript.
DOI: 10.14284/685
title: Watamu-Malindi artisanal fishing sites

description: Artisanal fishing sites of Watamu-Malindi area collected at the North coast of Kenya by marine conservationists. The data file can be opened in any GIS software.
description: Data captured in coordinate reference system WGS1984. It represents locations of artisanal fishing areas in Watamu-Malindi area in Kenya. The data was captured in an independent assignment to help in producing a map of fishing grounds. Data collection involved riding on a boat with the fishermen from various landing sites and tracking on a GPS the boundaries of the fishing grounds.
DOI: 10.15468/dl.383zkv
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Squamata",
 "TaxonKey is Crocodylia",
 "TaxonKey is Testudines",
 "TaxonKey is Sphenodontia",
 "TaxonKey is Amphibia"
 ]
 },
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "and" : [
 "DecimalLongitude is greater than 173.2510986",
 "DecimalLongitude is less than 176.4605865",
 "DecimalLatitude is greater than -1.3751841",
 "DecimalLatitude is less than 2.0610759",
 "Country is Kiribati"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036637-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z9pkfk
title: Occurrence Download

description: A dataset containing 152 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-36.97018 29.47114,-3.38298 29.47114,-3.38298 49.03074,-36.97018 49.03074,-36.97018 29.47114))",
 "TaxonKey is Melanostomias bartonbeani Parr, 1927"
 ]
}

 The dataset includes 152 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036638-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n42wth
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Squamata",
 "TaxonKey is Crocodylia",
 "TaxonKey is Testudines",
 "TaxonKey is Sphenodontia",
 "TaxonKey is Amphibia"
 ]
 },
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "and" : [
 "DecimalLongitude is greater than 68.5997238",
 "DecimalLongitude is less than 70.5575027",
 "DecimalLatitude is greater than -49.7355537",
 "DecimalLatitude is less than -48.6218872",
 "Country is French Southern Territories"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036639-240906103802322/datasets/export for details.
DOI: 10.15468/dl.e9j72k
title: Occurrence Download

description: A dataset containing 19683 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is NYSM Birds"
 ]
}

 The dataset includes 19683 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036640-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8huarn
title: Occurrence Download

description: A dataset containing 8716 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Plant Occurrence Data from: Plant Community Structure in Tropical Rain Forest Fragments of the Western Ghats, India"
 ]
}

 The dataset includes 8716 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036641-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13868335
title: Supplemental data of

description: Supplemental data of <RNA binding protein ELAVL1 is associated with severity and prognosis of hepatocellular carcinoma patients: a retrospective study>
DOI: 10.5281/zenodo.13868336
title: Supplemental data of

description: Supplemental data of <RNA binding protein ELAVL1 is associated with severity and prognosis of hepatocellular carcinoma patients: a retrospective study>
DOI: 10.15468/dl.fk4k8v
title: Occurrence Download

description: A dataset containing 368446 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-77.68716 43.11028, -77.52945 43.11028, -77.52945 43.21962, -77.68716 43.21962, -77.68716 43.11028))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 368446 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036628-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k59zxy
title: Occurrence Download

description: A dataset containing 1284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Glossophaga longirostris Miller, 1898"
 ]
}

 The dataset includes 1284 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036642-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cgv8sz
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bathysciola simonis (Abeille de Perrin, 1875)"
 ]
}

 The dataset includes 12 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036644-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccz71w3
title: CCDC 900515: Experimental Crystal Structure Determination

description: Related Article: C.Chavez, E.E.Nesterov, F.R.Fronczek|2012|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.d7vm8y
title: Occurrence Download

description: A dataset containing 48476812 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Denmark",
 "GadmGid is DNK",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 48476812 records from 653 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036630-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k5cm5j
title: Occurrence Download

description: A dataset containing 777 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-64.2877 8.837092, -64.14169 8.837092, -64.14169 8.918343, -64.2877 8.918343, -64.2877 8.837092))",
 "Year is greater than or equal to 2010",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 777 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036645-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc10tyc4
title: CCDC 948456: Experimental Crystal Structure Determination

description: Related Article: Berline Mougang-Soume|2013|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.jqgyvh
title: Occurrence Download

description: A dataset containing 357 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is DNK.2.1_1",
 "TaxonKey is Jacobaea vulgaris Gaertn."
 ]
}

 The dataset includes 357 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036646-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc11q1tm
title: CCDC 974510: Experimental Crystal Structure Determination

description: Related Article: Wei-Guan Yuan, Wei Tang,  Hong-Ling Zhang, Bo Zhao, Fang Xiong, Lin-Hai Jing, Da-Bin Qin|2014|Jiegou Huaxue|33|325|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cczwpk2
title: CCDC 920345: Experimental Crystal Structure Determination

description: Related Article: Bin Xie, Sha-Sha Zhu, Yu-Long Li, Li-Ke Zou, Xiao Lin, Lin-Xin He, Xiu-Lan Zhang, Feng Xie|2013|Jiegou Huaxue|32|1485|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc11rgcm
title: CCDC 975860: Experimental Crystal Structure Determination

description: Related Article: Zheng Zhang, Liangyuan Shi, Jingxuan Zhang, Ruikang Huang, Qiuyang Guan, Xiongzhou Lu, Yoamou Zhang, Chun-Lin Ni|2014|Huaxue Yanjiu|25|167|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.jgjpjw
title: Occurrence Download

description: A dataset containing 172 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Données biodiversité Projet éolien de Rougé"
 ]
}

 The dataset includes 172 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036647-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4zpbe4
title: Occurrence Download

description: A dataset containing 624 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Nepal",
 "TaxonKey is Ficus L."
 ]
}

 The dataset includes 624 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036649-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.