cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17491501
title: Supplementary Material for Genome-wide modulation of alternative splicing by a predicted alpha helix in U2AF2

description: Supplementary Material: AlphaFold-predicted protein structure coordinates, PyMOL scripts, and GROMACS MD simulation files

AlphaFold-predicted protein structure coordinates: UAF-1 (C. elegans ortholog of U2AF2) and U2AF2 (human), as well as their heterodimeric complexes with UAF-2 (C. elegans ortholog of U2AF1) or U2AF1 (human). For each target, we provide mmCIF coordinate files for the five ranked models, per-residue confidence scores (pLDDT) in the summary_confidences JSON files, full prediction metadata (including PAE matrices and model details) in the full_data JSON files, the original job request JSON, and the terms of use.

PyMOL scripts: U2AF65 RNAH motif conformation analysis using PyMOL 2.5 (open-source version, https://github.com/schrodinger/pymol-open-source). The parameters of the RNAH motif, including the helical tilt angle, local twist, and root mean square deviation (RMSD), as well as the generation of the helical axis centerline, were calculated using custom Python scripts integrated with PyMOL.

GROMACS MD simulation files: including the binary input run file (extracted_traj.tpr) and the compressed trajectory (extracted_traj.xtc), together with hydrogen‑bond analysis outputs and the associated scripts used to generate them.
DOI: 10.5281/zenodo.17491502
title: Supplementary Material for Genome-wide modulation of alternative splicing by a predicted alpha helix in U2AF2

description: Supplementary Material: AlphaFold-predicted protein structure coordinates, PyMOL scripts, and GROMACS MD simulation files

AlphaFold-predicted protein structure coordinates: UAF-1 (C. elegans ortholog of U2AF2) and U2AF2 (human), as well as their heterodimeric complexes with UAF-2 (C. elegans ortholog of U2AF1) or U2AF1 (human). For each target, we provide mmCIF coordinate files for the five ranked models, per-residue confidence scores (pLDDT) in the summary_confidences JSON files, full prediction metadata (including PAE matrices and model details) in the full_data JSON files, the original job request JSON, and the terms of use.

PyMOL scripts: U2AF65 RNAH motif conformation analysis using PyMOL 2.5 (open-source version, https://github.com/schrodinger/pymol-open-source). The parameters of the RNAH motif, including the helical tilt angle, local twist, and root mean square deviation (RMSD), as well as the generation of the helical axis centerline, were calculated using custom Python scripts integrated with PyMOL.

GROMACS MD simulation files: including the binary input run file (extracted_traj.tpr) and the compressed trajectory (extracted_traj.xtc), together with hydrogen‑bond analysis outputs and the associated scripts used to generate them.
DOI: 10.5281/zenodo.17500517
title: AI For E-Commerce: Customer Satisfaction & Purchase Decision
DOI: 10.5281/zenodo.17499654
title: Palette Dataset
DOI: 10.5281/zenodo.17499655
title: Palette Dataset
DOI: 10.15468/dl.ytb2pt
title: Occurrence Download

description: A dataset containing 922632 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Icterus bullockii",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 922632 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010630-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/wm2t-h572
title: "Defect detection dataset"

description: "The software development industry has experienced a gradual yet apparent transformation. Developers are attempting to respond to this growing requirement by adding automation to all that is becoming more and more a matter of software. Techniques such as pipelining as continuous integration (CI) and continuous delivery (CD) have evolved much due to the massive demands of the release and portability of new features and applications. Concurrently, quality control of industry, especially surface inspection, encounters difficulties with manual inspection or traditional machine learning, which is slow, prone to error and hard to scale. The application of AI models into production presents further complexity since there is no consistency in the environment, problems with reproducibility, and integration challenges. Objective: The proposed study is expected to create a scalable, reproduceable, and low-code AI implementation framework that consists of CI\/CD pipelines to handle automated model management, real-time inference, and adaptive retraining. Methodology: The framework was tested with three datasets: NEU Surface Defect Database (five types of defects: crazing, inclusion, scratches, pitted surface and rolled-in scale), CIFAR-10 dataset (general-purpose image classification) and Intel Image Classifier dataset (natural scene classification). PyTorch resizing, normalization and tensor conversion were used to preprocess all datasets. Multi-class classification tasks of the ResNet18 with pretrained ImageNet weights were fine-tuned. The trained models were provided through a low-code FastAPI interface, which was image based using Docker, and deployed on Kubernetes. Jenkins and ArgoCD CI\/CD pipelines based on automated version control, testing, deployment and continuous monitoring. Some of the evaluation measures were accuracy, precision, recall, F1-score, and the confusion matrix analysis. Results & Comparison: ResNet18 demonstrated the highest accuracy (93.27%), precision (93.31), recall (93.27), and F1-score (93.26), outperforming YOLOv5s (76.3%), LSTM, Random Forest (86 90s), and other machine learning models. Visualization ensured correct detection of every type of defect. Conclusion: CI\/CD pipelines that are combined with Docker, Kubernetes, and low-code AI development will allow having reproducible, scalable, and enterprise-ready deployment. The framework is operational efficient, adaptable retraining and limited manual intervention and is a feasible solution to real time industrial AI use."
DOI: 10.34740/kaggle/dsv/13575814
title: Daily Public Opinion on Israel-Palestine War
DOI: 10.5281/zenodo.15716180
title: Stimulus–Organism–Response (S-O-R) in Banking Research: A Bibliometric Analysis of Intellectual Structure and Emerging Trends
DOI: 10.5281/zenodo.15716179
title: Stimulus–Organism–Response (S-O-R) in Banking Research: A Bibliometric Analysis of Intellectual Structure and Emerging Trends
DOI: 10.60797/comp.2025.8.3.1
title: Результаты эксперимента по курсу Mathematics-1

description: Cifra. Компьютерные науки и информатика, Выпуск 4 (8) 2025
DOI: 10.15468/dl.ejrvx2
title: Occurrence Download

description: A dataset containing 280122 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Europe, Asia)",
 "Month is May",
 "TaxonKey is Anas crecca"
 ]
}

 The dataset includes 280122 records from 478 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010649-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qaanqe
title: Occurrence Download

description: A dataset containing 229500 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Asia, Europe)",
 "Month is October",
 "TaxonKey is Aythya fuligula"
 ]
}

 The dataset includes 229500 records from 443 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010647-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13575865
title: Public Opinion on Climate Change (Updated Daily)
DOI: 10.5281/zenodo.17500689
title: AI For E-Commerce: Customer Satisfaction & Purchase Decision
DOI: 10.15468/dl.ne3yp5
title: Occurrence Download

description: A dataset containing 3673194869 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 3673194869 records from 77585 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010479-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17240843
title: Large cities lose their growth advantage as urban systems mature -- Raw data

description: This repository contains the raw datasets used in Large cities lose their growth advantage as urban systems mature. It includes only openly licensed sources (CC-BY, CC-BY-NC-SA, Public Domain). Redistribution-restricted data (e.g., IPUMS USA, NHGIS) are not included.
DOI: 10.5281/zenodo.17343655
title: Large cities lose their growth advantage as urban systems mature -- Raw data

description: This repository contains the raw datasets used in Large cities lose their growth advantage as urban systems mature. It includes only openly licensed sources (CC-BY, CC-BY-NC-SA, Public Domain). Redistribution-restricted data (e.g., IPUMS USA, NHGIS) are not included.
DOI: 10.5281/zenodo.17338967
title: Large cities lose their growth advantage as urban systems mature -- Database dump

description: This repository contains a single SQL dump for Large cities lose their growth advantage as urban systems mature. The dump contains all aggregate tables resulting from running the project's code.
DOI: 10.5281/zenodo.17338968
title: Large cities lose their growth advantage as urban systems mature -- Database dump

description: This repository contains a single SQL dump for Large cities lose their growth advantage as urban systems mature. The dump contains all aggregate tables resulting from running the project's code.
DOI: 10.5281/zenodo.17315338
title: Boundaries & population of cities: USA (1850–2020) and World (1975–2025)

description: This repository contains:

 

1) City boundaries and population for the United States (1850-2020) and the world (1975-2025). Data are organized around the idea of cluster_growth: a stable city boundary computed for a time window (y_1, y_2), within which growth is measured consistently. Among the numerous city definition, this definition has two main advantages: (i) it dynamically adjusts as urban areas expand; and (ii) it is consistent across space and time, facilitating robust comparative analyses.

2) Data and projections of the share of world population living in cities of 1 million people or more between 1975 and 2100.

 

For more information see the paper and the code.
DOI: 10.5281/zenodo.17315337
title: Boundaries & population of cities: USA (1850–2020) and World (1975–2025)

description: This repository contains:

 

1) City boundaries and population for the United States (1850-2020) and the world (1975-2025). Data are organized around the idea of cluster_growth: a stable city boundary computed for a time window (y_1, y_2), within which growth is measured consistently. Among the numerous city definition, this definition has two main advantages: (i) it dynamically adjusts as urban areas expand; and (ii) it is consistent across space and time, facilitating robust comparative analyses.

2) Data and projections of the share of world population living in cities of 1 million people or more between 1975 and 2100.

 

For more information see the paper and the code.
DOI: 10.15468/dl.4sa3kc
title: Occurrence Download

description: A dataset containing 183176 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 countrycode countrycode,
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, countrycode, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, countrycode, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, countrycode, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, countrycode, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, countrycode, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, countrycode, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.basisofrecord IN ('HUMAN_OBSERVATION', 'PRESERVED_SPECIMEN')
 AND occurrence.countrycode IN ('PK', 'CN')
 AND occurrence.hascoordinate = TRUE
 AND occurrence.hasgeospatialissues = FALSE
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence."year" &gt;= 2000 AND occurrence."year" &lt;= 2025)
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL AND occurrence.hascoordinate = TRUE)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year",
 occurrence.countrycode

 The dataset's 183176 records were derived from 470 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010654-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/6y1-vm2-hab
title: Monacha samsunensis (L. Pfeiffer, 1868)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xd8-m06-ykc
title: Ceratopoma Möllendorff, 1893

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bdl-35x-98j
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vqd-yr6-9q0
title: Granaria frumentum illyrica (Rossmässler, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/www-dlw-tqk
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2k3-48z-gwl
title: Steromphala cineraria (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5pm-mfl-jt0
title: Marcia japonica (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/34c-j13-5wv
title: Pomatias elegans (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5sv-845-pf6
title: Diplommatina subglaber Vermeulen, 1992

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2cc-zr9-2an
title: Chama Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ke6-9b5-6nb
title: Monacha cartusiana (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fwq-ea9-m4t
title: Albinaria corrugata inflata (Olivier, 1801)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4t6-7bd-pr2
title: Plectostoma dancei dancei (Vermeulen, 1994)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k4r-ced-gar
title: Lucerna lucerna (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mvg-wtm-5ym
title: Cochlicella acuta (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zn0-sh5-q4f
title: Curveulima capensis (Thiele, 1915)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/89k-jt5-lds
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5pa-eh1-n9z
title: Helix philibinensis Rossmässler, 1839

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bfp-zsk-3c3
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4y3-d6g-k7x
title: Emarginula multistriata Jeffreys, 1882

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wsz-m43-mzg
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f3t-4h8-s52
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yr8-baj-n18
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3j8-wpq-qla
title: Canarium urceus (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gcb-1vw-dk5
title: Haliotis tuberculata Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vhr-sza-fz2
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.xs3ab2
title: Occurrence Download

description: A dataset containing 239885 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium pilosella"
 ]
}

 The dataset includes 239885 records from 1026 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009423-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/rqx-f68-d5q
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zdv-2a2-wq7
title: Polyspirella pellucida (G. B. Sowerby III, 1897)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ee8-rhn-1j0
title: Macrogastra plicatula plicatula (Draparnaud, 1801)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1zz-d0e-0xv
title: Otala lactea (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lbw-b9b-cz8
title: Cerithium nodulosum Bruguière, 1792

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mpm-0tv-g0v
title: Cantareus apertus (Born, 1778)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xgc-trs-tb3
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ezc-0s1-prs
title: Nesopupa maaseni van Regteren Altena, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2rh-82b-5v4
title: Gonyodiscus rotundatus (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gjd-bh8-1de
title: Mastus sphakiotus Maassen, 1995

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/byc-0a9-9sh
title: Macrogastra plicatula (Draparnaud, 1801)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fv0-l03-6q9
title: Pomatias elegans (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/as6-7gt-n68
title: Clausilia bidentata bidentata (Strøm, 1765)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zlb-r3l-r1x
title: Macrogastra attenuata lineolata (Held, 1836)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9vs-8qj-ss0
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bfq-3vs-5by
title: Gafrarium pectinatum (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lpz-krv-a22
title: Marmorana platychela platychela (Menke, 1830)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3dx-8hz-yw6
title: Zilchiella grandiportus Weyrauch, 1957

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/knr-8lz-0l5
title: Diplommatina vermeuleni Maassen, 2007

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a5c-k83-1g0
title: Chilostoma achates achates (Rossmässler, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/exq-az4-f7v
title: Chondrina farinesii (Des Moulins, 1835)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pzw-ynj-mbe
title: Merdigera obscura (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t8g-w6q-s3r
title: Pisidium amnicum (O. F. Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7ac-qbe-wkr
title: Euglesa subtruncata (Malm, 1855)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7py-3z8-za9
title: Clausilia dubia dubia Draparnaud, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t7f-6b6-wkr
title: Codringtonia codringtonii (J. E. Gray, 1834)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vsc-pfq-evh
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1md-9je-p3j
title: Aegopinella nitidula (Draparnaud, 1805)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3ne-1ev-082
title: Macrogastra attenuata lineolata (Held, 1836)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0nn-fn5-pn1
title: Hastula strigilata (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4r1-geb-n2c
title: Lanistes ellipticus E. von Martens, 1866

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j9m-kwz-xj4
title: Poiretia cornea (Brumati, 1838)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.