cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3808140.v1
title: Supplementary Material for: Intellectual Disability in a Birth Cohort: Prevalence, Etiology, and Determinants at the Age of 4 Years

description: <i>Background:</i> Intellectual disability (ID), characterized by impairments in intellectual function and adaptive behavior, affects 1-3% of the population. Many studies investigated its etiology, but few are cohort studies in middle-income countries.<i>Aims:</i> To estimate prevalence, etiology, and factors related to ID among children prospectively followed since birth in a Southern Brazilian city (Pelotas). <i>Methods:</i> In 2004, maternity hospitals were visited daily and births were identified. Live-born infants (n = 4,231) whose family lived in the urban area have been followed for several years. At the age of 2 and 4 years, performances in development and intelligence tests were evaluated using the Battelle Developmental Inventory and Wechsler Intelligence Scale, respectively. Children considered as having developmental delay were invited to attend a genetic evaluation. <i>Results:</i> At 4 years of age, the prevalence of ID was 4.5%, and the etiology was classified into 5 groups: environmental (44.4%), genetic (20.5%), idiopathic (12.6%), neonatal sequelae (13.2%), other diseases (9.3%). Most children presented impairment in two or more areas of adaptive behavior. There was no difference in prenatal care attendance or maternal schooling among the groups. <i>Conclusion:</i> For about 40% of children, ID was attributed to nonbiological factors, suggesting that the rate may be reduced with appropriate interventions early in life.
DOI: 10.6084/m9.figshare.7666055.v3
title: Multi-channel EEG recordings during a sustained-attention driving task (pre-processed dataset)

description: This project adopted an event-related lane-departure paradigm in a virtual-reality (VR) dynamic driving simulator to quantitatively measure brain EEG dynamics along with the fluctuation of task performance throughout the experiment.All subjects were required to have driving license. None of the participants had a history of psychological disorders. All participants were instructed to sustain their attention to perform the task during the experiment, and the 32-ch EEG signals and the vehicle position were recorded simultaneously.Prior to the experiment, all participants completed a consent form stating their clear understanding of the experimental protocol which had been approved by Institutional Review Broad of Taipei Veterans General Hospital, Taiwan.<b>Experiment:</b> <br>All subjects participated in the sustained-attention driving experiment for 1.5 hours in the afternoon (13:00-14:00) after lunch, and all of them were asked to keep their attention focused on driving during the entire period. There was no break or resting session. At the beginning of the experiment (without any recordings), a five-minute pre-test was performed to ensure that every subject understood the instructions and they did not suffer from simulator-induced nausea. To investigate the effect of kinesthesia on brain activity in the sustained-attention driving task, each subject was asked to participate at least two driving sessions on different days. Each session lasted for about 90 min. One was the driving session with a fixed-based simulator but with no kinesthetic feedback, so subject had to monitor the vehicle deviation visually from the virtual scene.The other driving session involved a motion-based simulator with a six degree-of-freedom Stewart platform to simulate the dynamic response of the vehicle to the deviation event or steering. The visual and kinesthetic inputs together aroused the subject to attend to the deviation event and take action to correct the driving trajectory Data Requirement.A wired EEG cap with 32 Ag/AgCl electrodes, including 30 EEG electrodes and two reference electrodes (opposite lateral mastoids) was used to record the electrical activity of the brain from the scalp during the driving task. The EEG electrodes were placed according to a modified international 10-20 system. The contact impedance between all electrodes and the skin was kept &lt;5kΩ. The EEG recordings and the vehicle trajectory amplified by Scan SynAmps2 Express system (Compumedics Ltd., VIC, Australia) were digitized at 500 Hz (resolution: 16 bits) simultaneously.
DOI: 10.6084/m9.figshare.11605380.v2
title: Data and computer code from Distinguishing between parallel and serial processing in visual attention from neurobiological data.

description: This is the repository for the manuscript. See README.md. Content: data: spike train data in MatLab data format. include: header files. src: source files. programs: code that performs all the analysis
DOI: 10.6084/m9.figshare.20055086.v2
title: Meta-analysis of RNA Sequencing Data of Arabidopsis and Rice under Hypoxia

description: file1a,b: Metadata of the RNA-Seq experiments used for meta-analysis. (a) Arabidopsis, (b) rice. file2a,b: TPM values of the RNA-Seq experiments. (a) Arabidopsis, (b) rice. file3a,b: HN-ratio of the RNA-Seq experiments. (a) Arabidopsis, (b) rice. file4a,b: HN-score of the transcripts in each species. (a) Arabidopsis, (b) rice. The suffixes indicate At (<em>Arabidopsis thaliana</em>), Os (<em>Oryza sativa</em>), and Hs (<em>Homo sapiens</em>). file5a–d: HN-score of the hypoxia-inducible transcripts in each species. (a) Arabidopsis upregulated, (b) rice upregulated, (c) Arabidopsis downregulated, (d) rice downregulated. Columns with gene ontology (GO) names indicate annotation of the enrichment analysis in Metascape. 1 is having the annotation, and 0 is not having the annotation. file6a,b: HN-score of the genes related to general phenylpropanoid pathway. (a) Arabidopsis, (b) rice. file7: Gene set enrichment analysis of hypoxia-inducible genes in Arabidopsis when hypoxic treatments and submergence treatments were analyzed separately. file8: Gene set enrichment analysis of hypoxia-inducible upregulated genes with GO Molecular Functions (MF) or GO Cellular Components (CC). (a) Arabidopsis MF, (b) Arabidopsis CC, (c) rice MF, (d) rice CC. file9: Gene set enrichment analysis of hypoxia-inducible downregulated genes with GO Molecular Functions (MF) or GO Cellular Components (CC). (a) Arabidopsis MF, (b) Arabidopsis CC, (c) rice MF, (d) rice CC. file10: Protein–protein interaction network of the (a) commonly upregulated 40 genes and (b) commonly downregulated 19 genes analyzed by STRING. Differently colored lines represent seven types of evidence used in predicting the associations: Red, fusion evidence; Green, neighborhood evidence; Blue, cooccurrence evidence; Purple, experimental evidence; Yellow, textmining evidence; Light blue, database evidence; Black, coexpression evidence. file 11: Analysis of swapped pairs of biolocigal replicates.
DOI: 10.6084/m9.figshare.26196110.v4
title: Hospital accessibility by Ga2SFCA

description: Ensuring equitable access to health services is crucial for public welfare and social equity, and is a key objective of the United Nations' Sustainable Development Goals (SDGs). However, existing datasets often define hospital accessibility using travel time to hospitals in geographic dimension only, without considering the supply (hospital capacity) and demand (population distribution) dynamics. To overcome this limitation, we developed and validated a national-scale 1 KM map of both hospital travel time and hospital accessibility in China. We used Gaussian two-step floating catchment area (Ga2SFCA) model to calculate hospital accessibility, incorporating hospital capacity and service population. Various file types and statistical indicators are provided, making the dataset highly accessible for non-specialists. The dataset fills the gap in publicly available nationwide hospital accessibility data for China and can serve as a critical tool in optimizing resource allocation and developing targeted strategies to improve healthcare equity.
DOI: 10.17632/ghvhwcpkbg
title: Offline Handwriting Signature

description: This dataset consists of 12,600 images from 420 unique individuals, as well as 30 signatures for each participant. All signatures were provided by students and faculty from the University of Raparin in Ranya, Iraq, and Firat University in Elazig, Turkey. The methods for collecting our dataset are detailed below.
1.	Set up a grid of five rows and three columns on an A4 sheet of paper so that each person can sign 15 signatures on each side.
2.	Provide each signer with two pages of paper with a grid for the required thirty signatures.
3.	The signatures of each individual must be of the same type.
4.	Each signature on the grid paper must be written in blue and black ink.
We have a team dedicated to accumulating signatures and providing feedback prior to, following, and throughout the signing process. The accumulation of datasets occurred over the span of two months.
Each A4 page contained 15 signatures during the preprocessing phase; therefore, we automatically cropped and saved them using MATLAB's Crop function. Each signature was then preserved as a unique image and placed in the class corresponding to the corresponding individual. In the concluding phase, the images were resized to 500 x 600 pixels. We manually reviewed and cropped the images in search of these instances because, during automated cropping, it is conceivable that some signatures were removed from the boundary and other signature portions were obliterated.
DOI: 10.17632/jthr5mptvd
title: Adult Females with Barium (Ba) and Strontium (Sr) Data
DOI: 10.6084/m9.figshare.22971185.v3
title: Rehearsal_031322.csv

description: Data set in CSV file of the Rehearsal from 03/13/22
DOI: 10.6084/m9.figshare.27855435.v3
title: <b>Risky behaviors amongst medical students within the United States</b>

description: De-identified data from medical students across the United States regarding their subjective experiences with risky behaviors.
DOI: 10.6084/m9.figshare.7369964.v1
title: Sludge bioreactor microcosm study on complex bacterial communities and ecosystem function using 3-CA disturbance at varying frequencies for 35 days

description: Disturbance is known to affect ecosystem structure, but predicting its outcomes remains elusive. Similarly, community diversity is believed to relate to ecosystem functions, yet the underlying mechanisms are poorly understood. Here, we tested the effect of disturbance on the structure, assembly, and ecosystem function of complex microbial communities within an engineered system. We carried out a microcosm experiment where activated sludge bioreactors operated in daily cycles were subjected to eight different frequency levels of augmentation with a toxic pollutant, from never (undisturbed) to everyday (press-disturbed), for 35 days. Microbial communities were assessed by combining distance-based methods, general linear multivariate models, a-diversity indices, and null model analyses on metagenomics and 16S rRNA gene amplicon data. A stronger temporal decrease in a-diversity at the extreme, undisturbed and press-disturbed, ends of the disturbance range led to a hump-backed pattern, with the highest diversity found at intermediate levels of disturbance. Undisturbed and press-disturbed levels displayed the highest community and functional similarity across replicates, suggesting deterministic processes were dominating. The opposite was observed amongst intermediately disturbed levels, indicating stronger stochastic assembly mechanisms. Trade-offs were observed in ecosystem function between organic carbon removal and both nitrification and biomass productivity, as well as between diversity and these functions. Hence, not every ecosystem function was favoured by higher community diversity. Our results show that the assessment of changes in diversity, along with the underlying stochastic-deterministic assembly processes, is essential to understanding the impact of disturbance in complex microbial communities.
DOI: 10.17632/9rb8mtdw7d
title: Data for: Demographics and Comorbidity of Behavior Problems in Dogs

description: Periodic canine population studies establish essential frames of reference for analyzing trends in demographics and the prevalence of problematic behaviors. In this study, we hosted a public, online questionnaire to capture up-to-date demographic and behavior problem metrics. Surveyed problematic behaviors include fear/anxiety, aggression, jumping, excessive barking, coprophagia, compulsion, house soiling, rolling in repulsive materials, overactivity/hyperactivity, destructive behavior, running away/escaping, and mounting/humping. A total of 3201 dog owners submitted information about 5018 dogs, spanning mixed and pure breeds. Males and female dogs were equally represented; a majority of which were neutered. The prevalence of canine behavior problems was 85% in the unbiased, filtered results. We found gender, neuter status, origin, and lineage to have a notable effect on the prevalence of behavior problems. We also found age, neutered status, origin, and lineage to have a notable effect on the number of behavior problems per dog. Owners were asked to provide details of any behavior problem they reported such as intensity, frequency and situation in which the behavior problem occurred. We examined the problematic behaviors in terms of their overall prevalence, and characteristics, and computed correlations between the various behavior problems.

This dataset includes:
- The raw data.
- The data dictionary to interpret the raw data.
- A link the GitHub repository where analysis was performed.

Change Log:
- Version 1 (28 Nov 2018)
  - Initial release.
- Version 2 (1 Aug 2019)
  - Fixed broken link to related software repository.
- Version 3 (26 Sep 2019)
  - Fixed broken link to related software repository.
- Version 4 (23 Jan 2022)
  - Added change log to Mendeley Data description.
  - Fixed broken link to related software repository.
DOI: 10.17632/jrt8ngbvp2
title: JAAD Research Letter- indoor tanning and multiple primary melanomas supplemental materials

description: JAAD Research Letter supplemental tables and figures
DOI: 10.6084/m9.figshare.28723253.v1
title: Spermatogenesis

description: Dataset of scRNA-seq measurements from spermatogenesis cells, including cell state annotation from the original study, and spliced and unspliced reads estimated with velocyto.Please cite the original publication: https://doi.org/10.1016/j.celrep.2018.10.026.
DOI: 10.17632/xdmcx36bvc
title: Data of ocean bottom seismometers

description: This dataset includes shot data and seismicity data of ocean bottom seismometers from YK13-01, YK13-03.
Please see README in each directory.
DOI: 10.6084/m9.figshare.3840738.v1
title: Supplementary Material for: Isolated Cystic Periventricular Leukomalacia Differs from Cystic Periventricular Leukomalacia with Intraventricular Hemorrhage in Prevalence, Risk Factors and Outcomes in Preterm Infants

description: <i>Background:</i> Cystic periventricular leukomalacia (cPVL) is the most severe white matter injury and is often associated with intraventricular hemorrhage (IVH) in preterm infants. <i>Objective:</i> The aim of this study was to investigate the prevalence, risk factors and neurodevelopmental outcomes of isolated cPVL and cPVL with low-grade and high-grade IVH in premature infants. <i>Methods:</i> From 2001 to 2012, 9,964 infants with &lt;31 weeks' gestational age (GA) admitted to Taiwan hospitals were enrolled. cPVL was classified into three groups: isolated cPVL, cPVL with low-grade (I/II) IVH, and cPVL with high-grade (III) IVH. <i>Results:</i> Of 7,805 infants with complete ultrasound data, 286 (3.7%) had cPVL. Among the cPVL infants, 93 (32.5%) were isolated, 118 (41.3%) had low-grade IVH and 75 (26.2%) had high-grade IVH. The risk of cPVL with IVH was significantly higher among infants with &lt;27 weeks' GA than those with ≥27 weeks' GA, in contrast to that of isolated cPVL. Using infants without cPVL and IVH as the reference group, the most significant predictor of isolated cPVL was neonatal sepsis (odds ratio 2.39; 95% confidence interval 1.52-3.77), while 5-min Apgar score &lt;5 (2.50; 1.48-4.21) and prolonged mechanical ventilation (2.19; 1.42-3.42) were associated with cPVL with low-grade IVH, and GA &lt;27 weeks (2.63; 1.56-4.42), pneumothorax (3.04; 1.40-6.65) and prolonged mechanical ventilation (3.36; 1.88-6.01) contributed to cPVL with high-grade IVH. cPVL infants with low-grade and high-grade IVH had a higher risk of abnormal neurodevelopmental outcomes than infants with isolated cPVL at the age of 24 months. <i>Conclusions:</i> Isolated cPVL, cPVL with low-grade IVH and cPVL with high-grade IVH had different risk factors and neurodevelopmental outcomes, suggestive of different causal pathways.
DOI: 10.6084/m9.figshare.6264767.v1
title: Untitled Item

description: raw data, syntax and output
DOI: 10.17632/gmz374n75n
title: U.S. Annual Firearms Manufacturing and Export Report: Aggregate Time Series Dataset 2000-2021

description: This dataset compiles yearly records from the Annual Firearms Manufacturing and Export Report (AFMER) published by the U.S. Bureau of Alcohol, Tobacco, Firearms and Explosives (ATF). The records were digitized, cleaned, and merged by RDS key, indicating unique firearm manufacturing locations, across different firearm type, and across multiple years, from 2000-2021. The result of this archival digitizing project is a dataset that enables researchers to compare trends in manufacturing over time and place. Manufacturing locations that produced over 2500 manufactured firearms (2000-2021) were selected and georeferenced. These locations are included with XY values, suitable for use in a GIS database.
DOI: 10.6084/m9.figshare.10315505.v7
title: Implicature dataset

description: This data set consists of conversational implicatures of utterances. Conversational implicatures are the meanings of an utterance more than what is literally stated by the utterance. The data consist of 1001 utterances that come as responses in a specific context and their implicatures. These written representations of the utterances are collected manually by scraping and transcribing from relevant sources from August, 2019 to August, 2020. The source of dialogues in the data include TOEFL listening comprehension short conversations, movie dialogues from IMSDb and websites explaining idioms, similes, metaphors and hyperboles. The implicatures are annotated manually.FormattingThe dataset file (Conversational Implicature Dataset 1-1001 - implicature data 1-1001.csv) is written as comma-separated values file. Columns that contain commas (,) are escaped using double-quotes ("). The dataset is also available as an excel sheet (Conversational Implicature Dataset 1-1001.xlsx)ContentThe dataset is available in Conversational Implicature Dataset 1-1001 - implicature data 1-1001.csv. Each entry in the dataset consists of a context utterance, a response utterance and an Implicature.Context UtteranceThe written representation of an utterance which serves as the context in which the response utterance can implicate a meaning different from its literal meaning.Response UtteranceThe written representation of an utterance which has a different meaning than the meaning of the sentences used in it.ImplicatureThe implicated meaning of the response utterance.
DOI: 10.6084/m9.figshare.21656864.v1
title: GAMIFICATION THROUGH COLLABORATIVE LEARNING IN MEDICAL EDUCATION

description: Raw data and analysed data from the module and lesson feedback collected from voluntary student participation via self-administered feedback questionairre
DOI: 10.17632/6xdh2fg4m5
title: Road section data (Beijing)

description: Road running intensity data from the Keep app check-ins for some sections within the second ring road in Beijing.
DOI: 10.17632/793xbbbtpw
title: Percutaneous nephrostomy clinical features dataset

description: To evaluate medical decisions regarding urinary tract infection (UTI), describe associated microorganisms, and assess potential risk factors for percutaneous nephrostomy-related UTI (UTI-PN) this retrospective cohort was designed.
Patients who underwent percutaneous nephrostomy (PN) were included. We assessed percutaneous nephrostomy procedure-related UTI (UTI-PNp) and percutaneous nephrostomy catheter-related UTI (UTI-PNc).
A total of 734 PN procedures were performed (45.4% first catheter placement, 54.6% catheter replacement). Fever was the primary clinical indicator guiding treatment decisions for both UTI-PNp (43.3%; 26/60) and UTI-PNc (44.6%; 99/222). Leukocyturia, either alone or combined with turbid urine, foul-smelling urine, or leukocytosis, influenced treatment decisions in 5.0% (3/60) of UTI-PNp cases and 17.1% (38/222) of UTI-PNc cases. No risk factors were identified for UTI-PNp; however, the time until urinary obstruction resolution via PN and first PN placement increased the odds of developing UTI-PNc. Among urine cultures, 74.7% (121/162) from cases with zero to two antibiotic use episodes showed multidrug-resistant bacteria, compared to 25.3% (41/162) in cases with three to six episodes (P&lt;0.001).
Achieving an accurate infection diagnosis is of paramount importance to mitigate multidrug-resistant bacteria prevalence.
DOI: 10.6084/m9.figshare.27872001.v1
title: Beyond baby talk: Unique vocal dynamics directed at older adults,

description: Humans instinctively adapt their speech dynamics based on their communication partner. Despite the significant developmental differences between infants and older adults, it is commonly believed that vocal communication directed towards older adults mirrors baby talk. This study examined spoken, sung, and whispered vocalizations produced by young adults to infants, older adults, and adults of similar age. Results showed that listeners across cultures accurately identified the intended audience, and distinct acoustic patterns were observed in vocalizations directed towards older adults, challenging the assumption of uniform communication strategies for infants and older adults. We propose that an assessment of the cognitive, hearing, emotional, and attentional needs and abilities of listeners is crucial in shaping communication dynamics, leading to distinct vocal dynamics for infants and older adults.
DOI: 10.17632/87k772px3x
title: Data for: Mercury abundance and isotopic composition in granitic rocks: Implications for Hg cycling in the upper continental crust

description: Whole-rock major and trace element, Hg contents and isotopic compositions of granitic rocks and other upper crustal rocks
DOI: 10.6084/m9.figshare.12967088.v1
title: wp_ukb.txt.gz

description: Self-reported walking pace GWASSummary statistics
DOI: 10.6084/m9.figshare.19723255.v1
title: S5_Bifido_MG

description: <strong>Table S5</strong>. Information of the metagenomes sequencing of <em>Bifidobacterium</em> abundant samples.
DOI: 10.6084/m9.figshare.24425746.v1
title: Data - 02-10-2023

description: EEG Data Collected on 02-10-2023