cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/gnrwwh9w6v
title: Dataset on Environmental Sunlight Sensing

description: Environmental sensing is an ongoing and well-established research methodology for engineering, architecture and urban planning studies. Environmental sunlight data can have applications in different domains, from engineering to architecture, including energy harvesting, photovoltaic cells, and green infrastructure (gardens and greenhouses that rely on solar radiation for maintenance). The dataset contains the measurements on Environmental Sunlight Sensing, including dates, times, values, and sky-type scenarios for the empirical data gathered using two Shandong Renke Control Technology sensors, a Pyranometer (PYR) and a Photosynthetically Active Radiation (PAR) Sensor. The monitoring campaign took six months (April – September) of 2023 along 18 days, with three data collections each day in all cases. The empirical data collection was generated in Singapore; according to the Köppen Climate Classification, the city-state has a Tropical Rainforest Climate (Af). This type of climate is usually found along the equator and has yearly stable conditions showing non-pronounced seasons. Due to the regularity of Singapore’s climate, the monitoring period created enough data granularity to generate satisfactory and accurate results. The data collection process was developed at the Singapore University of Technology and Design campus at Building 5, in three locations at roof, façade and ground levels selected to test diverse sunlight conditions. The sensors were systematically located at the exact position for each data collection procedure. The principal investigator and creator of the data collection methodology was Ph.D student Alba Lombardía (Architecture and Sustainable Design), supported by an Undergraduate Research Opportunities Program (UROP), directed by Prof. Arlindo Silva and in which undergraduate student from Engineering Product Development pillar Andrew Tan Jing participated in collecting data in the months of July-August.
DOI: 10.6084/m9.figshare.19158590.v1
title: In-Silico Prediction of DNA Aptamers against BipD for the Detection of Burkholderia pseudomallei using Computational Method

description: Melioidosis is an infectious disease caused by the environmental bacterium <i>Burkholderia pseudomallei </i>(<i>B. pseudomallei</i>). Although the culture method is the gold standard, it cannot apply to fast on-site testing because it requires a long time. Therefore, a rapid, sensitive, and cost-effective method is highly desirable to develop for the detection of <i>B. pseudomallei</i>. In recent years, aptasensor has been widely used to detect pathogens as it is a rapid, sensitive, precise, and low-cost detection technique. We aimed to use an <i>in-silico </i>approach to overcome the inevitable shortcoming of SELEX and predict DNA aptamers with high affinity and selectivity against <i>Burkholderia </i>invasion protein D (BipD) for the detection of <i>B. pseudomallei</i>. The complex secondary structure of DNA aptamers was discovered with minimum Gibbs free energy via the mFold webserver to generate a stable tertiary structure for molecular docking. Three DNA aptamer-BipD complex with the lowest binding energy were identified through Vina software and selected for further wet laboratory validation using enzyme-linked oligonucleotide assay (ELONA) and surface plasmon resonance (SPR).<br>
DOI: 10.6084/m9.figshare.24220714.v2
title: <b>ASSESSMENT OF POTENTIAL DRUG-DRUG INTERATIONS IN HOSPITALIZED PATIENTS WITH INFECTIOUS DISEASES – AN EXPERIENCE FROM A SECONDARY CARE HOSPITAL</b>

description: This was a prospective observational study carried out in a secondary care hospital to assess the potential drug -drug interactions in hospitalized patients with infectious diseases in a secondary care hospital in United Arab Emirates
DOI: 10.6084/m9.figshare.26669244.v1
title: Additional file 4 of PancrESS – a meta-analysis resource for understanding cell-type specific expression in the human pancreas

description: Additional file 4: Table S3. Pancreatic marker gene compilation.
DOI: 10.17632/48g97r7nkh
title: LOW QUALITY OF LIFE INDICATORS IN PATIENTS UPON ADMITTANCE TO A PSYCHIATRIC HOSPITAL: A PILOT STUDY WITH HISTORICAL CONTROL

description: Excel tables in Russ & Eng. 
To compare patients, the MatchID parameter is used in each table - 1000-1060 are patients in the study sample, 4000-4060 are patients in the control group from a study in the USA (Chaudhary N, Luettich K, Peck MJ, Pierri E, Felber-Medlin L, Vuillaume G, Leroy P, Hoeng J, Peitsch MC. Physiological and biological characterization of smokers with and without COPD. F1000Res. 2017 Jun 13;6:877. doi: 10.12688/f1000research.11698.2. PMID: 29862011; PMCID: PMC5843826.)
The files represent the following data
DB.xlsx - General database;
Index.xlsx - Database of hospital patients from which a sample of 60 people was recruited for the study.
Files Diag 1-5.xlsx - Tables with concomitant diagnoses according to ICD-10
File Disabled.xlsx - Data table with analysis of disability among the studied group.
Neurologist.xlsx - Concomitant diagnoses from examination by a neurologist.
Therapist.xlsx - Concomitant diagnoses from examination by a therapist.
SF-36_30_resp1-2 - Table used to evaluate the SF36 questionnaire.

The aim of the work: was to study the quality of life of patients in a psychiatric hospital, as well as to identify differences with a control group of healthy people. Methods: A cross-sectional observational study was conducted among inpatients of a psychiatric hospital using the SF-36 quality of life questionnaire. The sample included 60 patients of both sexes, aged 20 to 82 years. Some epidemiological, clinical, and anthropometric data for all subjects are presented. The results of the experimental group are compared with those of healthy individuals, based on retrospective published data. This was a pilot observational study of a cross-sectional nature. The data of the study group were collected in a short period from 01.01.24 to 31.05.24. The quality of life indicators of the study group were assessed during hospitalization using the SF-36 questionnaire. The results of the experimental group are compared with the results of observations of the control group based on retrospective published data from a study in the USA [10], where the open data presents the QOL indicators of a group of healthy subjects. A comparison is also given with the data of a healthy population in the Russian Federation obtained in a study (Simonov et al., 2013), and New Zealand (Frieling, Davis, Chiang, 2013) . The control data were chosen due to the availability of their open data, relative novelty, and also because the populations of these countries are predominantly Caucasian (demographic factor). In addition, the choice of these studies was due to their first appearance in the search for relevant information.
DOI: 10.6084/m9.figshare.28672877.v2
title: Computational Datasets for 'Nucleosome Spacing Can Fine-Tune Higher Order Chromatin Assembly'

description: Computational Datasets for 'Nucleosome Spacing Can Fine-Tune Higher Order Chromatin Assembly'
DOI: 10.6084/m9.figshare.3514871.v1
title: Appendix A. Background on general circulation models, choice of a stock–recruitment function, and distribution model based on logistic regression.

description: Background on general circulation models, choice of a stock–recruitment function, and distribution model based on logistic regression.
DOI: 10.6084/m9.figshare.11799336.v1
title: Low taxonomic resolution of papillate Cupressaceae pollen (former Taxodiaceae) impairs their applicability for palaeo-habitat reconstruction

description: The former family Taxodiaceae is currently treated as nine genera in five subfamilies of the family Cupressaceae. Pollen of the ‘taxodiaceous’ Cupressaceae typically has a papilla in the leptoma area and is common in Cenozoic strata because some of its genera were key elements in lignite forming swamp forests. Dispersed fossil pollen of this group are often assigned to particular genera and, based on the modern ecologies of these taxa, to particular palaeoenvironments. In this study, we investigated pollen of all nine genera of the former Taxodiaceae using light and scanning electron microscopy to evaluate whether pollen morphology can be used to discriminate modern genera of this paraphyletic group. We found few genus- or subfamily-diagnostic characters among members of taxodiaceous Cupressaceae. Features such as orbiculae and pollen and leptoma size cannot be used to discriminate subfamilies. However, three basal subfamilies share short papillae, whereas in two more derived clades (Sequoioideae and Taxodioideae) papillae are markedly longer. In the generally non-papillate core Cupressaceae, the leptoma (aperture) area may or may not possess a distinct circular thinning as also found in the basal grade of taxodiaceous Cupressaceae. Our results show that it is difficult if not impossible to distinguish genera of the ecologically distinct Taxodioideae and Sequoioideae based on pollen morphology. In view of a much wider ecological amplitude of many taxodiaceous Cupressaceae during large parts of the Cenozoic, we conclude that it is not recommendable to infer particular palaeoenvironments on the basis of dispersed taxodiaceous pollen grains alone.
DOI: 10.6084/m9.figshare.28326707.v1
title: p-distances for three new <i>Pristimantis </i>from Peru

description: Genetic distances (uncorrected p-distances) estimated from 611 bp of the non-coding 16S rRNA mitochondrial fragment between three new species of <i>Pristimantis </i>from Peru and their closest relatives. The number of base differences per site from between sequences are shown. The analytical procedure encompassed 108 nucleotide sequences. The pairwise deletion option was applied to all ambiguous positions for each sequence pair resulting in a final data set comprising 611 positions.
DOI: 10.17632/jnkpjwty87
title: Data for: Enhanced spectroscopic properties with Y2O3/Al2O3 ratio in Ho3+-doped sol-gel high silica glasses

description: Absorption spectrum of Ho3+-doped sol-gel high silica glasses with different Y2O3 /Al2O3 ratio
DOI: 10.6084/m9.figshare.22303204.v1
title: Supplementary Material for: The global incidence rate of pemphigus vulgaris: a systematic review and meta-analysis

description: Background: Pemphigus vulgaris is a life-threatening autoimmune bullous disease characterized by flaccid blister formation. As there has been no macroscopic assessment of epidemiological characteristics, its disease burden in the general population remains unknown. Objectives: To assess the global incidence rate of pemphigus vulgaris in the general population. Methods: The search was conducted in databases including Medline, Embase, Web of Science, and The Cochrane Library from inception to May 1st, 2022. We included original studies that either reported incidence of pemphigus vulgaris or provided raw data for calculating. Studies based on a specific population instead of the general population were excluded. Individual studies were summarized using random-effects mode. The pooled incidence rate of pemphigus vulgaris among the general population and subgroups were obtained. Heterogeneity (I2 statistic) was assessed with the χ2 test on Cochrane’s Q statistic. Results: 29 studies were eligible for final analysis and the pooled incidence rate of pemphigus vulgaris was 2.83 per million person-years (95%CI, 2.14-3.61). The incidence rate was similar between men and women and remained stable in the past half-century. Southern Asia showed the highest rate among subcontinents that had more than one study conducted as 4.94 per million person-years (95%CI, 2.55-8.10). Economic levels do not seem to have any bearing on incidence. Conclusions: Despite the substantial heterogeneity among studies, this meta-analysis revealed the worldwide incidence rate of pemphigus vulgaris for the first time and may assist in assessing global disease burden and promoting health policy.
DOI: 10.6084/m9.figshare.4616122.v1
title: CMFIF_data_anthropometrics

description: Public dataset for the PlosOne article entitled "Identification of the contribution of contact and aerial biomechanical parameters in acrobatic performance"
DOI: 10.6084/m9.figshare.5129749.v1
title: Supplementary Material for: Checkpoint Inhibitors and Their Application in Breast Cancer

description: Immune checkpoints are crucial for the maintenance of self-tolerance and for the modulation of immune responses in order to minimize tissue damage. Tumor cells take advantage of these mechanisms to evade immune recognition. A significant proportion of tumors, including breast cancers, can express co-inhibitory molecules that are important formediating the escape from T cell-mediated immune surveillance. The interaction of inhibitory receptors with their ligands can be blocked by specific molecules. Monoclonal antibodies (mAbs) directed against the cytotoxic T lymphocyte-associated antigen-4 (CTLA4) and, more recently, against the programmed cell death protein 1 (PD1), have been approved for the therapy of melanoma (anti-CTLA4 and anti-PD1 mAbs) and non-small cell lung cancer (anti-PD1 mAbs). Moreover, inhibition of PD1 signaling has shown extremely promising signs of activity in breast cancer. An increasing number of molecules directed against other immune checkpoints are currently under clinical development. In this review, we summarize the evidence supporting the implementation of checkpoint inhibition in breast cancer by reviewing in detail data on PD-L1 expression and its regulation. In addition, opportunities to boost anti-tumor immunity in breast cancer with checkpoint inhibitor-based immunotherapies alone and in combination with other treatment options will be discussed.
DOI: 10.5522/04/28731329.v1
title: Surface Chemistry-based Continuous Separation of Colloidal Particles via Diffusiophoresis and Diffusioosmosis

description: Epi-fluorescence micrographs and simulated particle concentration fields used to generate the results shown in Fig.1, Fig. 2, Fig. 3, Fig. 5 and Fig. 6 of "<i>Surface Chemistry-based Continuous Separation of Colloidal Particles via Diffusiophoresis and Diffusioosmosis</i><i> </i>" by A. Chakra, C. Puijk, G. T. Vladisavljevic, C. Cottin-Bizonne, C. Pirat and G. Bolognesi.Full description of the dataset is provided in the Readme.pdf file.
DOI: 10.6084/m9.figshare.21455928.v1
title: Supplementary Material for: Guidelines for the Management of Atopic Dermatitis in Children: A Systematic Review

description: <b><i>Introduction:</i></b> Numerous guidelines have been published for atopic dermatitis management in children in recent years. To date, the quality of the newest guidelines has not been appraised. This study aimed to identify and evaluate guidelines for the management of atopic dermatitis in children. <b><i>Methods:</i></b> We reviewed the literature retrieved from PubMed, Web of Science, Ovid, ScienceDirect, Embase, China National Knowledge Infrastructure, WanFang Data, and guidelines websites. Search period from January 1, 2016, to December 31, 2021. The following keywords were used for searching: “atopic dermatitis,” “atopic eczema,” “eczema,” “guideline,” and “consensus.” The quality of the guidelines was assessed by two assessors using the Appraisal of Guidelines for Research & Evaluation II (AGREE II) instrument independently, and domain scores &gt;60% were considered to have sufficient quality. The guideline recommendations were reviewed. <b><i>Results:</i></b> Nineteen guidelines were included in the study. Three guidelines had a graded A level, which was recommended for use in practice. Eleven guidelines had a graded B level, which was recommended for use in revision. The remaining five guidelines were rated with C level, which was not recommended. The average score of six domains of AGREE II was 64.76%, 48.53%, 42.35%, 73.83%, 32.23%, and 70.17%, respectively. A consistency test showed an intraclass correlation coefficient range of 0.497 (95% CI: 0.105, 0.705) to 0.970 (95% CI: 0.93, 0.987) based on the two assessors’ test results for the guidelines. <b><i>Conclusions:</i></b> Most guidelines were recommended for use with revision. No significant changes were observed in the primary management of atopic dermatitis in children compared to previous evidence. New biological agents and complementary alternative medicine are increasingly available, but the evidence for the treatment of atopic dermatitis in children is still limited.
DOI: 10.6084/m9.figshare.25927249.v1
title: Weather data

description: Weather data for the location
DOI: 10.6084/m9.figshare.1157161.v1
title: Statistics of Natural Binaural Sounds - Supplementary Material

description: Wiktor Mlynarski, Juergen Jost (2014) Statistics of Natural Binaural Sounds, PLOS One 9(10): e108968. doi:10.1371/journal.pone.0108968 Each file is a 12 minute binaural recording of a natural auditory scene. Data were used to analyze statistics of stimuli processed by the auditory system in the natural environment. 1. Nocturnal nature - the recording subject sat in a randomly selected position in the garden during summer evening. During the recording the subject was keeping his head still, looking ahead, with his chin parallel to the ground. The dominating background sound were grasshopper calls. Other acoustic events included sounds of a distant storm and a few cars passing by on a near-by road. The spatial configuration of this scene did not change much in time - the scene was almost static. 2. Forest walk - this recording was performed by a subject freely moving in the wooded area. The second speaker was present, engaged in a free conversation with the recording subject. In addition to speech, this scene included environmental sounds such as flowing water, cracks of broken sticks,leave crunching, wind etc. Binaural signal was affected not only by the spatial scene configuration, but also by head and body motion patterns of the recording subject. 3. City center - the recording subject sat in a touristic area of an old part of town, fixating the head as in the previous case. During the recording many moving and static human speakers were present. Contrasted with the previous example, the spatial configuration of the scene varied continuously. Two of the analyzed auditory scenes (nocturnal nature and city center) were recorded by a non-<br>moving subject, therefore sound statistics were unaffected by listener’s motion patterns and self generated sounds. In the third scene (forest walk) the subject was moving freely and was speaking sparsely. Recordings were performed using the Soundman OKM-II binaural microphones which were placed in the left and the right ear channels of the recording subject. Soudmann DR2 recorder was used to simultaneously record sound in both channels in an uncompressed wave format at 44100 Hz sampling rate. The head circumference of the recording subject was equal to 60 cm.
DOI: 10.17632/bjjgncw7h4
title: Data for: Rational design 2D/2D BiOCl/H+Ti2NbO7- heterojunctions for enhanced photocatalytic degradation activity

description: The detailed research data of the submitted manuscript.
DOI: 10.17632/d4f3r6pmxr
title: Sentiment of keywords from annual reports of Slovak commercial bank

description: The dataset represents extracted keyword bigrams from documents published by commercial banks for the years 2007-2022. Lemmatization was applied to the extracted keywords and subsequently the sentiment (positive, negative, neutral) of these keywords was determined. The documents are divided into the categories of Pillar 3 Disclosure, which are documents that are required to be disclosed under Pillar 3. The second category is Pillar 3 Related, which are documents that are not directly required to be disclosed, but are related to mandatory disclosure. In the case of subcategories, we designated financial reports published at the level of a year and half a year with the summary category financial reports. The remaining subcategories match the name (type) of the document. The NAN value in the cells represents that the observed keyword did not appear in the observed document in that year.
DOI: 10.6084/m9.figshare.23592387.v1
title: The T-plot of all the miRNA-target pairs

description: The T-plot of all the miRNA-target pairs plotted based on degradome density files of <em>Malus </em>‘Indian summer’.
DOI: 10.6084/m9.figshare.24024294.v3
title: The code of mapping the global risk of SARS-CoV-2 infection in animals

description: Increasing reports of SARS-CoV-2 infections in animals have raised concerns about potential natural reservoirs for the virus. However, our understanding of the global distribution and drivers of animal infection risk remains limited. To address this knowledge gap, we conducted an extensive data mining from various sources and developed machine learning-based models to project the global probability of animal infection.
DOI: 10.6084/m9.figshare.24297505.v1
title: Protein-templated ligand discovery via the selection of DNA-encoded dynamic libraries (Source Data)

description: DNA-encoded chemical libraries (DELs) have become a powerful technology platform in drug discovery. Dual-pharmacophore DELs display two sets of small molecules at the termini of DNA duplexes, thereby enabling the identification of synergistic binders against biological targets, and have been successfully applied in fragment-based ligand discovery and affinity maturation of known ligands. However, dual-pharmacophore DELs identify separate binders that require subsequent linking to obtain the full ligands, which is often challenging. Here we report a protein-templated DEL selection approach that can identify full ligand/inhibitor structures from DNA-encoded dynamic libraries (DEDLs) without the need for subsequent fragment linking. Our approach is based on dynamic DNA hybridization and target-templated in situ ligand synthesis, and it incorporates and encodes the linker structures in the library, along with the building blocks, to be sampled by the target protein. To demonstrate the performance of this method, 4.35-million- and 3.00-million-member DEDLs with different library architectures were prepared, and hit selection was achieved against four therapeutically relevant target proteins.
DOI: 10.6084/m9.figshare.14305733.v1
title: Rheo-Die-Casting of Al-Si-Mg Alloy and Al-Si-Mg/ SiCp Composites: Microstructure and Wear Behavior

description: Abstract In this paper, Rheo-Die Cast (RDC) Al-Si alloy with 7.5 wt % Si and 0.3 wt %Mg and Metal Matrix Composites (MMC’s) of RDC Al-Si composites with 5 to 20 vol. % of SiCp were produced by an in-house fabricated RDC machine. Microstructure and wear behavior of both RDC alloy and composites were investigated. Results indicated that the RDC samples have significantly refined microstructure with fine and uniform non-dendritic grains resulting increased hardness and enhanced wear resistance. Wear resistance is three times higher for sample with 20% SiCp than those without SiCp additions. Surfaces of wear test samples were investigated by SEM to study the effect of both grain structure and SiCp particulates on the wear mechanism. It was also observed that reinforced RDC samples showed improved hardness and wear resistance due to the presence of SiCp in the matrix of non-dendritic grains, obtained without modification treatment.
DOI: 10.6084/m9.figshare.25330576.v1
title: data_s.csv

description: Diabetes detection and classification using machine learning techniques,<br>Combining Machine Learning and Deep Learning with SHAP XAI to Classify Diabetes Patients in Jordan.