cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18788452
title: Question-Level Human–AI Grading Dataset for Undergraduate Computing Courses (IT2430/IT2431/IT1230, Spring 2024–Fall 2024)

description: This dataset contains paired, question-level grading records used to evaluate agreement, bias, and calibration between instructor (human) grading and AI-assisted grading in undergraduate computing education. It includes 2,480 graded question-response records collected from three Georgia Southern University courses: IT2430 (Data Programming I), IT2431 (Computer Programming II), and IT1230 (Web Technologies), spanning two academic terms and 120 unique questions across 24 instructional topics.

Each row represents one student response to one question and provides both the human-assigned and AI-generated scores on the same item, along with contextual metadata. Scores are reported on the original point scale of the item (max_points = 5 or 10), enabling normalization and direct paired comparisons.

Columnscourse_id: Course identifier (e.g., IT2430)term: Academic term (e.g., Spring 2024)question_id: Unique question identifiertopic: Instructional topic labelmax_points: Maximum possible points for the question (5 or 10)human_score: Human-assigned scoreai_score: AI-generated scorehuman_feedback_length_chars: Length of human feedback in charactersai_feedback_length_chars: Length of AI feedback in characters

Intended useThe dataset supports reproducible analyses of human–AI grading alignment at question-level resolution (e.g., correlation, ICC, weighted kappa over binned grades, Bland–Altman diagnostics, MAE/RMSE, and decile-based calibration). It is referenced in the companion paper “Human–AI Grading Agreement in Computing Education: A Question-Level Reliability and Calibration Study.”
DOI: 10.13018/bmr52302
title: Abl 1b isoform wild type SH3-SH2-KD (aa 83-515) in complex with imatinib
DOI: 10.5281/zenodo.18788375
title: Thermographic data for manuscript Mus.4189-D-31 (SLUB)

description: This data set contains thermographic images for the visualisation of watermarks. An IRCAM Equus 327k with Watermark Imager software (Fraunhofer) version 8.416 (R2016b) was used.
DOI: 10.5281/zenodo.18788376
title: Thermographic data for manuscript Mus.4189-D-31 (SLUB)

description: This data set contains thermographic images for the visualisation of watermarks. An IRCAM Equus 327k with Watermark Imager software (Fraunhofer) version 8.416 (R2016b) was used.
DOI: 10.13018/bmr52303
title: ZBP1 Tandem Zalpha Domains
DOI: 10.13018/bmr52304
title: Backbone chemical shifts for the human Fc gamma receptor 3a / CD16a soluble extracellular domain that is glycosylated with two N-glycans at N162 and N45
DOI: 10.13018/bmr52305
title: Abl 1b isoform E528K SH3-SH2-KD (aa 83-534) apo
DOI: 10.13018/bmr52306
title: Abl 1b isoform E528K SH3-SH2-KD (aa 83-534) in complex with imatinib
DOI: 10.13018/bmr52307
title: Abl 1b isoform wild type SH3-SH2-KD (aa 83-534) in complex with GNF-5
DOI: 10.5281/zenodo.18716483
title: U2S_gene_variants_in_FH_Online_Supplementary_Dataset
DOI: 10.5281/zenodo.18716482
title: U2S_gene_variants_in_FH_Online_Supplementary_Dataset
DOI: 10.13018/bmr52308
title: Backbone chemical shift assignments of human ZNF706
DOI: 10.13018/bmr52309
title: Backbone assignment of a Tau fragment (272-441) from Tau 4R isoforms
DOI: 10.13018/bmr52310
title: Abl 1b isoform wild type SH3-SH2-KD (aa 83-534) in complex with PD166326
DOI: 10.13018/bmr52311
title: 1H, 13C and 15N backbone resonance assignments of the oncogenic protein NCYM
DOI: 10.13018/bmr52313
title: Vcom1
DOI: 10.13018/bmr52314
title: Ancy-m, Ancestral Mobius cyclotide
DOI: 10.13018/bmr52315
title: Ancy-b, Ancestral Bracelet cyclotide
DOI: 10.5281/zenodo.10440391
title: Distributional limits of the Shortnose Guitarfish, Zapteryx  brevirostris (Rhinopristiformes: Trygonorrhinidae) -  An update

description: The Shortnose Guitarfish, Zapteryx brevirostris, is endemic to the Southwest Atlantic and its geographic range is commonly reported from Southeastern Brazil to Northern Argentina. However, range limits are imprecise or inconsistent in some cases. These inconsistencies were addressed in this study based on 1,363 specimens collected since 1865. These records were obtained from scientific collections, a systematic review of literature, and an on-board observation database. According to the data collected in this study, the known northernmost distributional limit of the species lies at the mouth of the Doce River, Northern Espírito Santo State, in Southeastern Brazil (19°S). As for the other extreme of its range, the known southernmost distribution limit refers to the Falkland Islands (Malvinas) (53°S). This represents more than 2,000 km of coastline geographic range extension — in comparison to the previous known southernmost range limit for this species. The geographical range of Z. brevirostris seems to follow biogeographic patterns operating at an ecosystem level in which biotic (especially in the north) and abiotic factors (especially in the south) play a role in imposing limits to its distribution range.
DOI: 10.5281/zenodo.10440392
title: Distributional limits of the Shortnose Guitarfish, Zapteryx  brevirostris (Rhinopristiformes: Trygonorrhinidae) -  An update

description: The Shortnose Guitarfish, Zapteryx brevirostris, is endemic to the Southwest Atlantic and its geographic range is commonly reported from Southeastern Brazil to Northern Argentina. However, range limits are imprecise or inconsistent in some cases. These inconsistencies were addressed in this study based on 1,363 specimens collected since 1865. These records were obtained from scientific collections, a systematic review of literature, and an on-board observation database. According to the data collected in this study, the known northernmost distributional limit of the species lies at the mouth of the Doce River, Northern Espírito Santo State, in Southeastern Brazil (19°S). As for the other extreme of its range, the known southernmost distribution limit refers to the Falkland Islands (Malvinas) (53°S). This represents more than 2,000 km of coastline geographic range extension — in comparison to the previous known southernmost range limit for this species. The geographical range of Z. brevirostris seems to follow biogeographic patterns operating at an ecosystem level in which biotic (especially in the north) and abiotic factors (especially in the south) play a role in imposing limits to its distribution range.
DOI: 10.13018/bmr52316
title: Vcom2
DOI: 10.13018/bmr52317
title: 1H, 13C, and 15N backbone resonance assignments of E. coli Peptide Deformylase (1-147) bound to 2-(5-bromo-1H-indol-3-yl)-N-hydroxyacetamide
DOI: 10.13018/bmr52318
title: 1H, 13C, and 15N backbone resonance assignments of E. coli Peptide Deformylase (1-147) bound to 2-(5-bromo-1H-indol-3-yl)-N-hydroxyacetamide
DOI: 10.13018/bmr52320
title: An extended interaction site determines binding between AP180 and AP2 in clathrin mediated endocytosis
DOI: 10.13018/bmr52321
title: Poecitoxin-1a from Poecilotheria subfusca spider
DOI: 10.13018/bmr52322
title: An extended interaction site determines binding between AP180 and AP2 in clathrin mediated endocytosis
DOI: 10.13018/bmr52323
title: An extended interaction site determines binding between AP180 and AP2 in clathrin mediated endocytosis
DOI: 10.5281/zenodo.18788161
title: On-Chip Chiroptical Sensor based on Directional Deflection of Light: A Stern-Gerlach Integrated Optical Analog

description: S-parameters data for all the simulations performed with CST. With this data we can obtain all the spectral figures shown within the article, as well as other parametric searches which were performed previously.
DOI: 10.5281/zenodo.18788162
title: On-Chip Chiroptical Sensor based on Directional Deflection of Light: A Stern-Gerlach Integrated Optical Analog

description: S-parameters data for all the simulations performed with CST. With this data we can obtain all the spectral figures shown within the article, as well as other parametric searches which were performed previously.
DOI: 10.13018/bmr52324
title: An extended interaction site determines binding between AP180 and AP2 in clathrin mediated endocytosis
DOI: 10.13018/bmr52325
title: An extended interaction site determines binding between AP180 and AP2 in clathrin mediated endocytosis
DOI: 10.15468/dl.4jdyy8
title: Occurrence Download

description: A dataset containing 1806 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Melitaea arduinna"
 ]
}

 The dataset includes 1806 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003677-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr52326
title: An extended interaction site determines binding between AP180 and AP2 in clathrin mediated endocytosis
DOI: 10.13018/bmr52337
title: 13C and 15N Chemical Shift Assignment for Abeta 40 amyloid fibrils polymorph 1 (P1)
DOI: 10.13018/bmr52338
title: 13C and 15N Chemical Shift Assignment for Abeta 40 amyloid fibrils polymorph 2 (P2)
DOI: 10.13018/bmr52339
title: Abl 1b isoform wild type SH3-SH2-KD (aa 83-534) in complex with imatinib
DOI: 10.13018/bmr52340
title: 4E-tau(297-407) in vitro AD C-shaped
DOI: 10.13018/bmr52343
title: Ubiquitin L50A mutant
DOI: 10.13018/bmr52344
title: Ubiqitin L50A mutant pressure unfolded
DOI: 10.13018/bmr52345
title: Backbone assignments of E. coli RfaH
DOI: 10.13018/bmr52346
title: CPEB4 N-terminal domain isoform lacking microexon 4
DOI: 10.13018/bmr52348
title: NMR Backbone Assignment (1H, 15N, and 13C) resonances of RfaH protein
DOI: 10.13018/bmr52349
title: Isoform-specific C-terminal phosphorylation drives autoinhibition of Casein Kinase 1
DOI: 10.13018/bmr52351
title: Backbone 1H, 13C and 15N chemical shift assignments of E. coli C6-crypto-AcpP.
DOI: 10.13018/bmr52352
title: Backbone 1H, and 15N chemical shift assignments of E. coli C8-crypto-AcpP.
DOI: 10.13018/bmr52353
title: Backbone 1H, and 15N chemical shift assignments of E. coli C10-crypto-AcpP.
DOI: 10.13018/bmr52354
title: Backbone assignment of Hrp48 RRM2
DOI: 10.13018/bmr52355
title: 8-17 DNAzyme in presence of various metal ions
DOI: 10.13018/bmr52356
title: 1H, 13C, and 15N Chemical Shift Assignments for amyloidogenic SEM2(49-107) peptide
DOI: 10.13018/bmr52357
title: 3x DPR1 dipeptide repeat with sequence (L-Tyr, D-Pip3
DOI: 10.13018/bmr52359
title: Backbone assignment of Hrp48 RRM1
DOI: 10.13018/bmr52362
title: Backbone assignment of Hrp48 RRM12 bound to 10mer RNA
DOI: 10.13018/bmr52363
title: GeoRec1 backbone assignments
DOI: 10.13018/bmr52364
title: The methyl assignment of E coli Hsp90 N domain
DOI: 10.13018/bmr52365
title: Chemical shifts, T1, T1rho, heteronuclear NOEs, RDCs of ubiquitin folding intermediate F'
DOI: 10.13018/bmr52366
title: The methyl assignment of E coli Hsp90 C domain
DOI: 10.13018/bmr52367
title: The backbone assignment of disordered protein D131D
DOI: 10.13018/bmr52368
title: The backbone assignment of FtsZ C-terminal disordered tail
DOI: 10.13018/bmr52369
title: TDP-43 W334G/W385G/W412G
DOI: 10.13018/bmr52370
title: Chemical shifts, T1, T1rho, RDCs of ubiquitin early folding intermediate U'
DOI: 10.13018/bmr52371
title: 1H, 13C and 15N backbone resonance assignment of Cel45A from Phanerochaete chrysosporium
DOI: 10.13018/bmr52372
title: Crimean Congo Hemorrhagic Fever Gn zinc finger
DOI: 10.13018/bmr52374
title: NMR chemical shift assignment of odorant binding protein 44a from Drosophila
DOI: 10.13018/bmr52375
title: Casein Kinase 1 delta 2 tail
DOI: 10.13018/bmr52376
title: Chemical shifts of folding intermediate N'
DOI: 10.13018/bmr52377
title: NMR chemical shift assignment of odorant binding protein 44a from Drosophila bound to fatty acid C20:1 (8Z), eicosenoic acid
DOI: 10.13018/bmr52378
title: BELL2 1H 13C 15N_assignment
DOI: 10.15468/dl.3yzfym
title: Occurrence Download

description: A dataset containing 25644 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Palmaria palmata"
 ]
}

 The dataset includes 25644 records from 282 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003676-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr52379
title: HIF-1alpha oxygen-dependent degradation domain
DOI: 10.13018/bmr52380
title: Solid-state NMR backbone chemical shift assignments of a-synuclein amyloid fibrils at fast MAS regime
DOI: 10.13018/bmr52381
title: Chemical shift assignments of the BCCP domain of Propionyl CoA carboxylase of Leishmania major
DOI: 10.13018/bmr52382
title: Double-hydroxylated HIF-1alpha oxygen-dependent degradation domain
DOI: 10.5281/zenodo.18788353
title: The New Italian Rehabilitation Hospital Discharge Form (SDO-R): Integrating Outcome Measures of Disability and Complexity with ICD-9-CM Codes for Interventions, Procedures, and Clinical Characteristics in Inpatient Neuro and Musculoskeletal Rehabilitation. An Observational Retrospective Monocentric Study

description: This study is a retrospective analysis of clinical and administrative data collected through the SDO-R database at an IRS located in Genoa, Northern Italy. A total of 983 consecutive admissions between January 2024 and June 2025 were included.
DOI: 10.5281/zenodo.18788352
title: The New Italian Rehabilitation Hospital Discharge Form (SDO-R): Integrating Outcome Measures of Disability and Complexity with ICD-9-CM Codes for Interventions, Procedures, and Clinical Characteristics in Inpatient Neuro and Musculoskeletal Rehabilitation. An Observational Retrospective Monocentric Study

description: This study is a retrospective analysis of clinical and administrative data collected through the SDO-R database at an IRS located in Genoa, Northern Italy. A total of 983 consecutive admissions between January 2024 and June 2025 were included.
DOI: 10.13018/bmr52383
title: 1H, 13C, and 15N Resonance Assignment of the La Motif of Human La-related Protein 1
DOI: 10.15468/dl.smr4gj
title: Occurrence Download

description: A dataset containing 1730 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "OccurrenceStatus is Present",
 "TaxonKey is Cecropia glaziovii"
 ]
}

 The dataset includes 1730 records from 121 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003679-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18788407
title: R codes (Urban heat island of related research)
DOI: 10.5281/zenodo.18788408
title: R codes (Urban heat island of related research)
DOI: 10.13018/bmr52384
title: Chemical shift assignments of a de novo designed 12 stranded transmembrane beta barrel
DOI: 10.5281/zenodo.17637264
title: A Global, Standardized City Segment Morphological Deprivation (CSMD) Model: Preprocessing, Training, Predictions, and Cross-Dataset Comparisons

description: This repository archives the data products supporting the City Segment Morphological Deprivation (CSMD) model, a globally standardized framework for mapping morphological deprivation at the neighborhood scale across 5,132 cities in 103 countries.

The CSMD workflow integrates harmonized built-environment indicators from City Segments v1 with IDEABench reference labels to train a supervised Random Forest classifier. Internal validation is performed using a Leave-One-City-Out (LOCO) cross-validation framework, and the final production model is trained on 100% of the labelled data prior to global deployment. The trained model is subsequently applied to all available city segments to generate global-scale deprivation predictions.

This Zenodo record contains all the required scripts, files, figures, and datasets required to replicate the study, including:



Final trained Random Forest model (.joblib)

Global segment-level prediction outputs

LOCO validation metrics

Country-level and global aggregation tables

Comparative alignment outputs with:



Slum Severity Index (SSI)

Million Neighbourhoods (MN)

WRI Intra-Urban Land-Use dataset



Intermediate processed datasets required for reproducibility.


The folder is organized into:



Preprocessing (segment preparation and label construction)

Model training and LOCO validation

Global application and aggregation

Cross-dataset comparative analysis

Figures and tables for manuscript reproduction


The CSMD model is designed as a scalable screening and prioritization tool that can be iteratively updated as new labelled data and improved global geospatial products become available.

Veeravalli, S.G., Blei, A., Friesen, J., Tareke, B., Kuffer, M., Persello, C., Maretto, R., Abascal, A., Georganos, S. and Thomson, D.R., 2025. The Hidden Burden of Morphological Deprivation in Small and Medium Cities. Under Revision, Nature Cities
DOI: 10.5281/zenodo.18788260
title: A Global, Standardized City Segment Morphological Deprivation (CSMD) Model: Preprocessing, Training, Predictions, and Cross-Dataset Comparisons

description: This repository archives the data products supporting the City Segment Morphological Deprivation (CSMD) model, a globally standardized framework for mapping morphological deprivation at the neighborhood scale across 5,132 cities in 103 countries.

The CSMD workflow integrates harmonized built-environment indicators from City Segments v1 with IDEABench reference labels to train a supervised Random Forest classifier. Internal validation is performed using a Leave-One-City-Out (LOCO) cross-validation framework, and the final production model is trained on 100% of the labelled data prior to global deployment. The trained model is subsequently applied to all available city segments to generate global-scale deprivation predictions.

This Zenodo record contains all the required scripts, files, figures, and datasets required to replicate the study, including:



Final trained Random Forest model (.joblib)

Global segment-level prediction outputs

LOCO validation metrics

Country-level and global aggregation tables

Comparative alignment outputs with:



Slum Severity Index (SSI)

Million Neighbourhoods (MN)

WRI Intra-Urban Land-Use dataset



Intermediate processed datasets required for reproducibility.


The folder is organized into:



Preprocessing (segment preparation and label construction)

Model training and LOCO validation

Global application and aggregation

Cross-dataset comparative analysis

Figures and tables for manuscript reproduction


The CSMD model is designed as a scalable screening and prioritization tool that can be iteratively updated as new labelled data and improved global geospatial products become available.

Veeravalli, S.G., Blei, A., Friesen, J., Tareke, B., Kuffer, M., Persello, C., Maretto, R., Abascal, A., Georganos, S. and Thomson, D.R., 2025. The Hidden Burden of Morphological Deprivation in Small and Medium Cities. Under Revision, Nature Cities
DOI: 10.13018/bmr52385
title: C-terminal EF-hand (EF34) Domain of a-actinin-1
DOI: 10.13018/bmr52386
title: C-terminal EF-hand (EF34) Domain of a-actinin-1 bound to GluN1-C0
DOI: 10.13018/bmr52387
title: Backbone 1H, 13C, and 15N Chemical Shift Assignments of the C-terminal region of XLF in the full-length XLF protein
DOI: 10.13018/bmr52388
title: Nanog NTD
DOI: 10.15468/dl.v49vdt
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Placosoma cordylinum)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 25 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003680-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr52389
title: Phosphorylated Nanog NTD
DOI: 10.13018/bmr52390
title: StREM13 160-198
DOI: 10.13018/bmr52391
title: StREM13 171-198
DOI: 10.13018/bmr52392
title: NFkappaB p52 DD (225-328) Homodimer
DOI: 10.13018/bmr52393
title: StREM13 150-198
DOI: 10.15468/dl.7vtjsn
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Georgia",
 "Geometry POLYGON((-32.36936 30.16548,84.36936 30.16548,84.36936 76.83452,-32.36936 76.83452,-32.36936 30.16548))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is one of (June, July, August)",
 "OccurrenceStatus is Present",
 "TaxonKey is Callimorpha dominula"
 ]
}

 The dataset includes 42 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003682-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13018/bmr52394
title: 1H, 13C, and 15N Amide Backbone Chemical Shift Assignments for Lcl-CTD
DOI: 10.13018/bmr52395
title: Complete 1H, 13C, and 15N Chemical Shift Assignments for Lcl collagen-like repeat (CLR) peptide
DOI: 10.13018/bmr52396
title: PfMATE pH6.8
DOI: 10.13018/bmr52397
title: PfMATE pH3.7
DOI: 10.13018/bmr52398
title: The C-terminal region of XRCC4
DOI: 10.13018/bmr52399
title: BRCT1
DOI: 10.13140/rg.2.2.27689.66408
title: Occupation des terres
DOI: 10.13018/bmr52400
title: Amide and a-hydrogens extension to the Solid-state NMR assignment of P. horikoshii TET2
DOI: 10.13018/bmr52401
title: Tau Domain (272-441) Phosphorylated by GSK3 beta
DOI: 10.13018/bmr52402
title: AtREM11 156-175
DOI: 10.13018/bmr52403
title: AtREM12 193-212
DOI: 10.13018/bmr52404
title: AtREM13 171-190
DOI: 10.13018/bmr52405
title: MtREM22 189-208
DOI: 10.13018/bmr52406
title: AtREM41 277-296
DOI: 10.13018/bmr52407
title: AtREM51 536-555
DOI: 10.13018/bmr52408
title: AtREM62 490-509
DOI: 10.13018/bmr52409
title: AtREM63 423-442
DOI: 10.13018/bmr52410
title: AtREM64 408-427
DOI: 10.13018/bmr52411
title: AtREM65 328-347
DOI: 10.13018/bmr52412
title: Backbone and side-chain resonance assignments of GRB2 with a SOS1 PRM and an EGFR phosphorylated peptide
DOI: 10.13018/bmr52413
title: Pre-binding plantaricin Ev
DOI: 10.13018/bmr52414
title: 1H-NMR assignments for the Z0 zinc-finger domain of transcription repressor Bcl11A
DOI: 10.15468/dl.rtczxm
title: Occurrence Download

description: A dataset containing 1535568 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-78.97147 49.03623,-78.81342 44.38046,-71.64889 44.64342,-72.07033 47.91877,-75.83698 49.60282,-78.97147 49.03623))",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (CR, EN, VU, NT)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1535568 records from 186 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003638-260225131425191/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.