cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19382588.v1
title: On the Applicability of Language Models to Block-Based Programs

description: This dataset contains, on the one hand, software and data to reproduce the study, on the other hand, the raw data of the experiments of the evaluation as conducted in the paper. This file shall provide you with a general overview on the dataset: <strong>n-gram model</strong>: NaLa is a Java framework with a connection to a postgresql database. It can be used for generating and evaluating n-gram models. The <strong>NaLa.zip</strong> folder contains two jars of NaLa for processing json or sb3 source code files of the block-based programming language Scratch. The jar comes packed with all the required dependencies. NaLa can be run on the command line. It takes the parameters that are required for connecting to the database as parameters on startup. For guidance on how to run the jar, we added examples for calling the jar for model building, completion evaluation, and bug finding (example_configs.zip). Please find detailed information on NaLa in the README_NaLa.md. <strong>completion_ngram.zip</strong> contains the datasets as used in the n-gram completion evaluation (RQ1), json100k (for training), json10k (for evaluating) for re-running NaLa, as well as the raw experiment results completion_experiment_results, which contain the relevant output files of NaLa that we use as a basis for our evaluation. For a detailed description on what the files are used for, please find detailed information on the output of NaLa in the README_NaLa.md. <strong>bugfinding.zip</strong> contains the datasets as used in the bugfinding evaluation (RQ2), fruit_correct (for training) and fruit_schueler (for evaluating) for re-running NaLa, as well as the raw experiment results bugfinding_experiment_results as provided by NaLa without the manual classification. bugram_data_classified.zip also contains the author's classifications for the sequences that were considered in the paper. For the sake of completeness, the bugfinding_experiment_results also contain the Whisker test suite that we used, as well as the Whisker results for all the programs. <strong>transformer.zip</strong> contains the transformer_model including the Python code used to train and evaluate the transformer, the checkpoint for the best model for which the results in the paper are reported and a separate README within the archive that explains the necessary steps to run the model training and evaluation, as well as the transformer_dataset, which was used as the transformer's training and validation datasets. Further, it contains the scratch_tokenizer, which is the code used to tokenize the Scratch programs into the input format for the transformer. A separate README within the archive explains how the program can be run. Last, it contains the transformer_results as used for RQ3. <strong>scripts.zip</strong> contains the analysis scripts for generating Tables and Figures from the raw data.
DOI: 10.6084/m9.figshare.21291423.v1
title: DNA sequence alignments - Preussia

description: DNA sequence alignments (ITSrDNA, partial LSUrDNA; EF1-a) for the Preussia intermedia clade, including endophytes of <em>Ephedra trifurca </em>in Arizona and selected strains from the literature.
DOI: 10.6084/m9.figshare.28012970.v1
title: Data for manuscript: A Growing Degree-Day Approach to Estimate Larval Hatching Sites using Backtracking Simulations without Larval Age

description: This is data for the manuscript: A Growing Degree-Day Approach to Estimate Larval Hatching Sites using Backtracking Simulations without Larval Age
DOI: 10.6084/m9.figshare.28630210.v1
title: Pueffel_figures_ESM from Behavioural biomechanics: leaf-cutter ant cutting behaviour depends on leaf edge geometry

description: Details on "Sensor calibration & drift correction", "Steady-state cutting force measurements", and "Effects of force increase on the ability to cut tropical leaves", as well as a table with regression results and two figures (one photograph of sheet buckling during ex-vivo experiments, one graph depicting the variation of in-plane stiffness).
DOI: 10.6084/m9.figshare.7697816.v2
title: Differences between the PubMed record and full-text methods section in in-vivo animal research articles

description: Large animal protocols submitted to Institutional Animal Care and Use Committees (IACUCs) are required to include searches for alternatives and address the “3Rs": <br><br>1. Refinement: use methodology and protocols that reduce pain and distress<br>2. Replacement: substitute animals with non-animal models or lower species<br>3. Reduction: minimize the number of animals <br>Locating descriptions of methodology for the refinement concept is challenging since PubMed (and most other databases) do not search full-text. <br>The objectives of this study were to determine how well the title, abstract, and MeSH terms cover the content of the methods section in in-vivo animal research articles, particularly with respect to procedures, drugs, and animal species used, and to describe how this might impact a search.<br>The title/abstract, MeSH terms, and methods section of each article were reviewed and details such as: animal species, number of animals, description of housing, description of experimental procedures used, and analgesia/anesthesia were extracted. <br><br>Articles were screened from April 2017 - September 2017. <br><br>Details for the methodology used and description of uploaded files are provided in the README.txt file. <br>
DOI: 10.6084/m9.figshare.8847836.v1
title: Dataset of five day fecundity test of tetranychus urticae on different hosts

description: For a bachelor project the fecundity of female spider mites (tetranychus urticae) were observed over 5 days. Subjects were of the same age but of different haplotypes and tested on different hosts; bean, honeysuckle and spindle tree.<br>
DOI: 10.17632/7k6wwcy568
title: Next-generation anti-PD-L1/IL-15 immunocytokine elicits superior antitumor immunity in cold tumors with minimal toxicity. Wenqiang Shi et al.

description: Figure S2D: Reducing SDS-PAGE analysis of anti-PD-L1, LH03 or LH05 as well as uPA-cleaved LH03 or LH05.
Figure 7C: Immunohistochemical staining for Ki67 was performed on the tumor tissues to assess cell proliferation.
Figure 7E: Immunofluorescence staining for CD8 (green) and Foxp3 (red) was performed on the tumor tissues.
Figure S7A: Reducing SDS-PAGE analysis of LH06 as well as MMP-cleaved LH06.
DOI: 10.6084/m9.figshare.13558615.v1
title: Additional file 1 of Comprehensive assessments of germline deletion structural variants reveal the association between prognostic MUC4 and CEP72 deletions and immune response gene expression in colorectal cancer patients

description: Additional file 1:. Supplementary Table 1: DSV information20201208
DOI: 10.6084/m9.figshare.13573856.v1
title: PPDaiData

description: PPDai dataset contains 55596 instances including 48413 non-default instances and 7183 default instances. Each instance contains 29 features (22 numeric features and 7 categorical features).
DOI: 10.6084/m9.figshare.19561159.v1
title: Data_Lie et al. GCB

description: Data for article "Warming drives sustained plant phosphorus demand in a humid tropical forest".
DOI: 10.6084/m9.figshare.25603917.v2
title: The annotation files of cultivated and wild <i>Morinda officinalis</i>

description: .gff/cds/pep files were the annotation files of config genome assembly vesion..chr.gff/cds/pep files were the annotation files of chromosomes genome assembly vesion.Morinda_officinalis.** are cultivated species data.Ymorinda_officinalis.** are wild species data.
DOI: 10.6084/m9.figshare.29002457.v2
title: 2.1. X1 Pearson's Correlation Pre-test (Output Data) - Doomscrolling and Information Overload on Generation Z: Examining the Link Between Excessive Digital Media Consumption and Stress Level

description: Pre-test analysis X1 variable (doomscrolling) results using IBM SPSS Statistics 26 for research title "Doomscrolling and Information Overload on Generation Z: Examining the Link Between Excessive Digital Media Consumption and Stress Level".
DOI: 10.6084/m9.figshare.6344666.v1
title: TGA.opj

description: Origin file for the TGA data (Figure 2)
DOI: 10.6084/m9.figshare.7333841.v1
title: Temperature and relative humidity vs Polarization Mode Dispersion (PMD) data in highland and semi arid areas conducted in Mau Summit and Sultan Hamud respectively

description: This data was obtained in a fibre optic communication cable deployed in the field. Two climatic zones were tested i.e. tropical highland and semi arid area. The field test activity was carried out at hourly intervals and lasted for about 1500 hours in each climatic zone. Polarization Mode Dispersion was measured alongside temperature and relative humidity fluctuations at hourly intervals.
DOI: 10.6084/m9.figshare.11905533.v1
title: Vocal repertoires from adult and chick, male and female zebra finches (Taeniopygia guttata)

description: <b>Vocalization library of the Zebra finch</b><br>This vocalization library was collected between 2011 and 2014 at the University of California Berkeley by Julie E Elie using birds bred in the colony of the Theunissen Lab.<br><br><i>Citations</i>Please cite the following papers when using data from this collection:<br>-&gt; Elie JE and Theunissen FE. The vocal repertoire of the domesticated zebra finch: a data driven approach to decipher the information-bearing acoustic features of communication signals. Animal Cognition. 2016. 19(2) 285-315 DOI 10.1007/s10071-015-0933-6 [OA eScholarship]<br>-&gt; Elie JE and Theunissen FE. Zebra Finches identify individuals using vocal signatures unique to each call type. Nature communication. 2018. 9:4026. doi: 10.1038/s41467-018-06394-9 [OA]<br><i><br></i><i>Annotations of vocalizations in the database</i>The database contains vocalizations both from adult and juvenile (around 30 days old) zebra finches. The sounds are organized in two zip folders according to the age of the vocalizer. The sex of adults is known. Each vocalization or sequence of vocalizations is saved as a wav file which name indicate the name of the individual (ColColxxxx), the type of vocalization (VT) and the recording date (yymmdd) using the following scheme:ColColxxxx_yymmdd-VT-zz.wavExample: GraLbl0457_110411-TetC-12.wav<br>ColColxxxx : The name of the individual is always a string of 10 letters and digits, e.g.: GraLbl0457yymmdd : The recording date always follows the first underscore as 6 digits, e.g.: 110411VT: The type of vocalization VT always follows the first hyphen and can be of various length but the first 2 letters always code the type of vocalization as described in Animal Cognition 2016 along 11 categories:<br>Ag -&gt; Wsst or aggressive callBe -&gt; Begging callsDC -&gt; Distance callDi -&gt; Distress callLT -&gt; Long Tonal callNe -&gt; Nest callSo -&gt; SongTe -&gt; Tet callTh -&gt; Thuk callTu -&gt; Tuck callWh -&gt; Whine call<br>zz: the rendition number always follows the last hyphen.<br>Note that some discrepancies in the naming of files are known to exist and somewhat expected since all of these 3433 files were manually annotated.<br><br><i>Contact</i>Julie E Elie: julie.elie@gmail.comFrederic E Theunissen : theunissen@berkeley.edu<br>
DOI: 10.6084/m9.figshare.1373867.v2
title: Segmentation of Vascular Ultrasound Image Sequences

description: A presentation entitled "Segmentation of Vascular Ultrasound Image Sequences". Extract the contents of the .zip file to a convenient location and open the .ppt file from that location to enable the videos in the presentation.
DOI: 10.6084/m9.figshare.24119496.v2
title: <b>Data for "Skin microbiome disturbance linked to drought-associated amphibian disease"</b>

description: The onset of global climate change has led to abnormal rainfall patterns, disrupting associations between wildlife and their symbiotic microorganisms. We monitored a population of pumpkin toadlets and their skin bacteria in the Brazilian Atlantic Forest during a drought. Given the recognized ability of some amphibian skin bacteria to inhibit the widespread fungal pathogen <i>Batrachochytrium dendrobatidis</i> (Bd), we investigated links between skin microbiome health, susceptibility to Bd, and host mortality during a die-off event. Rainfall deficit was an indirect predictor of Bd loads through microbiome disruption, while its direct effect on Bd was weak. The microbiome exhibited reduced putative Bd-inhibitory function following the drought, independent of infection status, and our findings pointed to a one-month lagged effect of drought on the microbiome that increased toadlet susceptibility to Bd. Our study underscores the capacity of rainfall variability to disturb complex host-microbiome interactions and disrupt wildlife disease dynamics.
DOI: 10.6084/m9.figshare.29117711.v1
title: Healthcare Workforce and Demographics Indonesia.xlsx

description: This dataset presents a summary of healthcare workforce distribution and demographic indicators across various provinces in Indonesia. It includes data on the number of nurses, midwives, and doctors, as well as key population statistics such as total population, population density, and life expectancy.
DOI: 10.6084/m9.figshare.6885119.v1
title: Raw data for "Trends in hepatocellular carcinoma research from 2008 to 2017: A bibliometric analysis."

description: The 24,331 papers related to hepatocellular carcinoma research between 2008 to 2017. Data were downloaded from the Web of Science Core Collection database on March 31, 2018.
DOI: 10.17632/7tptc7khc6
title: THE NEW LIDAR PROBE

description: INTRODUCTION to new dignostic imaging and analysis probe that use the familiar lidar techniqe in medical imagine field
DOI: 10.17632/h7h3kvdsx3
title: AUDIENCIAS VIRTUALES, EQUIDAD E INMEDIACIÓN EN EL SISTEMA JUDICIAL PERUANO VIRTUAL HEARINGS, FAIRNESS AND IMMEDIACY IN THE PERUVIAN JUDICIAL SYSTEM

description: RESUMEN 
En el contexto global donde las diversas áreas del conocimiento son transversalizadas por la virtualidad, es fundamental el abordaje y trazabilidad de los procesos de adecuación, siendo crítico el abordaje de las implicancias dentro del sistema jurídico. En ese orden, el objetivo del estudio fue analizar la incidencia de las audiencias virtuales sobre los principios de equidad e inmediación en Tribunales Civiles y penales, en el Perú, 2024. El enfoque se fundamentó en el paradigma socio jurídico. Investigación de diseño no experimental, analítico y mixto, conformada por una muestra de 147 operadores jurídicos de tribunales civiles y penales; aplicando la técnica de la encuesta. Los resultados evidenciaron que las audiencias virtuales adolecen de importantes limitaciones que potencialmente comprometen los principios de equidad e inmediación, fundamentalmente en materia de restricciones vinculadas a la interpretación de comunicación no verbal y a dificultades técnicas emergentes que afectan tanto la interacción entre las partes como la capacidad de los jueces para realizar evaluaciones precisas de la credibilidad de los testigos. El estudio concluye que la transición a audiencias virtuales en Perú demanda una reforma integral del sistema judicial para preservar la equidad, inmediación y el acceso a la justicia en el entorno digital.
PALABRAS CLAVE: Administración de justicia, Derechos civiles, Mediación, Comunicación no verbal
ABSTRACT
In the global context where the various areas of knowledge are transversalized by virtuality, it is essential to address and trace the processes of adaptation, being critical to address the implications within the legal system. In this order, the objective of the study was to analyze the incidence of virtual hearings on the principles of equity and immediacy in Civil and Criminal Courts in Peru, 2024. The approach was based on the socio-legal paradigm. Research of non-experimental, analytical and mixed design, formed by a sample of 147 legal operators of civil and criminal courts; applying the survey technique. The results showed that virtual hearings suffer from significant limitations that potentially compromise the principles of fairness and immediacy, mainly in terms of restrictions related to the interpretation of non-verbal communication and emerging technical difficulties that affect both the interaction between the parties and the ability of judges to make accurate assessments of the credibility of witnesses. The study concludes that the transition to virtual hearings in Peru requires a comprehensive reform of the judicial system to preserve fairness, immediacy and access to justice in the digital environment.
KEYWORDS: Administration of justice, Civil rights, Mediation, non-verbal communication
DOI: 10.26180/5db6e11d52f79
title: survival data for Wu et al

description: effects of individual nutrient dropouts on adult Drosophila lifespan
DOI: 10.6084/m9.figshare.5123569.v1
title: Supplementary Material for: Hypothermia: A Double-Edged Sword

description: Therapeutic hypothermia is currently used to reduce neurological ischemic damage in postcardiac arrest patients. Nevertheless, it has been associated with relevant side effects such as infections, bleeding, hypotension and hyperkalemia. Although hypothermia-induced coronary spasm is rare, its occurrence needs to be considered attentively as it adds a high risk of ventricular arrhythmias and cardiac arrest in patients with already-existing critical heart conditions.
DOI: 10.6084/m9.figshare.5821263.v2
title: Robject files for tissues processed by Seurat

description: Each tissue's gene expression profile was processed by experts to annotate clusters of cells with biological functions. These are the Robjects created using Seurat to normalize and cluster the single-cell RNA-seq expression data.<br>Update 2018-03-27: Updated to resubmitted Robj<br>Update 2018-09-20: Updated to accepted Robj
DOI: 10.17632/vyjfn4kth9
title: data for "Unified soil freezing characteristic for variably saturated and salty soils"

description: Data set S1 includes the temporal variation of temperature, the unfrozen water content in the soil with various salt concentrations and salt mass content. "TH2_SFCC_zhou.mph" is the numerical simulation of COMSOL, in which the power function model for SFCC is used. "TH2_SFCC_salt_zhou.mph" is the numerical simulation of COMSOL, in which salt is considered in SFCC.
DOI: 10.6084/m9.figshare.26781052.v1
title: A large multi-focus dataset for white blood cell classification

description: A large WBC classification dataset containing multi-focus images is provided in a zip file. In the root folder, you will find the images in JPEG format along with two CSV files named "labels.csv" and "slide_number.csv". Additionally, the dataset includes a "validation" folder, which can be used to reproduce the results in the "Technical Validation" section of the paper.
DOI: 10.25418/crick.24942786.v1
title: Data and analysis code for Bland et al., EMBO J (2024)

description: This repository includes all code and data required to reproduce the analysis in the following manuscript:Bland et al. Optimized PAR-2 RING dimerization mediates cooperative and selective membrane binding for robust cell polarity. EMBO J (2024). doi: 10.1038/s44318-024-00123-3.It includes the following:<b>Modeling and analysis code</b> (Code-2024-Bland-EMBO-EMBO_final_release, also available at https://github.com/goehringlab/2024-Bland-EMBO/releases/tag/EMBO_final).<b>Experimental Source Data</b> (Folder: SourceData-2024-Bland-EMBO).Some source data is provided in an alternative format at:https://www.ebi.ac.uk/biostudies/sourcedata/studies/S-SCDT-10_1038-S44318-024-00123-3Please see manuscript and included documentation for details.
DOI: 10.6084/m9.figshare.21866109.v2
title: Shape Files and Base Rasters required for R Code

description: This zip file includes the shape files required by our R code for North America, the United States, the empty base rasters for the five different resolutions used to make the ranges. All of our R code can be found at the github repository here: https://github.com/iDigBees/USBees.
DOI: 10.6084/m9.figshare.22803245.v1
title: GTA CP RAW DATA

description: GTA, CP RAW DATA
DOI: 10.6084/m9.figshare.26879188.v1
title: Row data

description: The Relationship between Safety Climate and Job Satisfaction Among Employees in a Tire Manufacturing Company
DOI: 10.6084/m9.figshare.27934656.v1
title: Soil data.xlsx

description: To explore soil multifunctionality and its driving factors
DOI: 10.6084/m9.figshare.28163420.v1
title: NCHEM-22122509B_Reeketal_FIGSHARE.rar

description: Selective formation of multicomponent structures via the self-assembly of numerous building blocks is ubiquitous in biological systems but challenging to emulate synthetically. More components introduce additional possibilities for kinetic intermediates with trap-state ability, hampering access to desired products. In covalent chemistry, templates, reagents and catalysts are applied to create alternative pathways for desired product formation. Analogously, we enlist<i>exo</i>-templating to mold the formation of large, multicomponent supramolecular structures. Specifically, a charged <b>ring</b>docks at 1,5-dioxynaphthalene stations within <i>exo</i>-functionalized building blocks to promote formation of cuboctahedral Pd<sub>12</sub>L<sub>24</sub> nanospheres via exoskeletal templating. With <i>exo</i>-templating<b> </b><b>ring</b> present, nanosphere formation occurs via small Pd<sub>x</sub>–L<sub>y</sub> oligomers, while in absence a Pd<sub>x</sub>–L<sub>y</sub> polymer resting-state rapidly evolves, from which nanosphere formation occurs slowly. We demonstrate a form of kinetic templating—via intermediate destabilization—resembling properties observed in catalysis. Importantly, unlike typically employed <i>endo</i>-templates, we demonstrate <i>exo</i>-templating is particularly suited for larger, complex self-assembled structures.
DOI: 10.6084/m9.figshare.6149858.v1
title: Travel time data used in “Imaging of Lithospheric Structure Beneath Jeju Volcanic Island by Teleseismic Travel Time Tomography”

description: This file contains waveform data that were used in our study, location of sources and receivers, travel times residuals, and final velocity models retrieved by tomographic inversion. Please refer to README.txt file for general description for the individual files.
DOI: 10.17632/tg72w6s5c2
title: Farm survey dataset

description: This is farm-level data collected in Thailand during 2019. Data represent Thai sugarcane farmers’ responses to the three policy scenarios which were collected through face-to-face interviews using a structured questionnaire. The sample size was 462 farmers.
DOI: 10.17632/wm4d5xnssd
title: Road time trial results and timings for international UCI para-cycling events 2011 - 2019: bicycling and tricycling.

description: All data taken from publicly available data sets supplied by the UCI (http://www.rsstiming.com/Resultats/UCIParacycling.htm) for international bicycling and tricycling road para-cycling events between 2011-2019. Dataset includes the following data fields: event, event name, event year, date, race time, distance (km), laps, bib number, participant code, UCI class code, year of birth, age, team, competition time, mean velocity, gender, classification class, rank within class, athlete appearances.
DOI: 10.6084/m9.figshare.23533755.v1
title: HVAR_Ha_flare_cat_v2.txt

description: A catalog of Hvar Observatory H-alpha observations of  prominent solar flares between 2011 and 2019 with classification of their shape, associated AR and GOES class.
DOI: 10.6084/m9.figshare.24250474.v1
title: 数据.zip

description: 这包括学生消费数据、成绩、假期信息和传统的课堂非移动使用信息。