cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10202159
title: v2.0.2 data for MCMC runs

description: Input files, data vectors and covariance matrices for the MCMC runs with CLOE v2.0.2 - nzTabSPV3.dat: n(z) for the 13 equipopulated redshift bins case- nuiTabSPV3.dat: fiducial values of the nuisance parameters (#bin centre, source number density, galaxy bias, logaritmic slope of the luminosity function, shift in bin centre, variance of the zp - z relation) 
- Cls_zNLA_PosPos_C00.dat: GCph data vector- Cls_zNLA_PosShear_C00.dat: GGL data vector (in the order GL)- Cls_zNLA_ShearShear_C00.dat: WL data vector 
- CovMat-3x2pt-Gauss-32Bins.npy: Gauss only 3x2pt covariance matrix
- CovMat-3x2pt-GaussSSC-32Bins.npy: Gauss + SSC 3x2pt covariance matrix
- power_galaxies_EFT_benchmark_z1..fits: GCsp data vector for bin centred on z = 1.0
- power_galaxies_EFT_benchmark_z1.2.fits: GCsp data vector for bin centred on z = 1.2
- power_galaxies_EFT_benchmark_z1.4.fits: GCsp data vector for bin centred on z = 1.4
- power_galaxies_EFT_benchmark_z1.65.fits: GCsp data vector for bin centred on z = 1.65
 
- cov_power_galaxies_EFT_benchmark_z1..fits: GCsp Gauss only covariance for bin centred on z = 1.0
- cov_power_galaxies_EFT_benchmark_z1.2.fits: GCsp Gauss only covariance for bin centred on z = 1.2
- cov_power_galaxies_EFT_benchmark_z1.4.fits: GCsp Gauss only covariance for bin centred on z = 1.4
- cov_power_galaxies_EFT_benchmark_z1.65.fits: GCsp Gauss only covariance for bin centred on z = 1.65
DOI: 10.5281/zenodo.10212464
title: v2.0.2 data for MCMC runs

description: Input files, data vectors and covariance matrices for the MCMC runs with CLOE v2.0.2 - nzTabSPV3.dat: n(z) for the 13 equipopulated redshift bins case- nuiTabSPV3.dat: fiducial values of the nuisance parameters (#bin centre, source number density, galaxy bias, logaritmic slope of the luminosity function, shift in bin centre, variance of the zp - z relation) 
- Cls_zNLA_PosPos_C00.dat: GCph data vector- Cls_zNLA_PosShear_C00.dat: GGL data vector (in the order GL)- Cls_zNLA_ShearShear_C00.dat: WL data vector 
- CovMat-3x2pt-Gauss-32Bins.npy: Gauss only 3x2pt covariance matrix
- CovMat-3x2pt-GaussSSC-32Bins.npy: Gauss + SSC 3x2pt covariance matrix
- power_galaxies_EFT_benchmark_z1..fits: GCsp data vector for bin centred on z = 1.0
- power_galaxies_EFT_benchmark_z1.2.fits: GCsp data vector for bin centred on z = 1.2
- power_galaxies_EFT_benchmark_z1.4.fits: GCsp data vector for bin centred on z = 1.4
- power_galaxies_EFT_benchmark_z1.65.fits: GCsp data vector for bin centred on z = 1.65
 
- cov_power_galaxies_EFT_benchmark_z1..fits: GCsp Gauss only covariance for bin centred on z = 1.0
- cov_power_galaxies_EFT_benchmark_z1.2.fits: GCsp Gauss only covariance for bin centred on z = 1.2
- cov_power_galaxies_EFT_benchmark_z1.4.fits: GCsp Gauss only covariance for bin centred on z = 1.4
- cov_power_galaxies_EFT_benchmark_z1.65.fits: GCsp Gauss only covariance for bin centred on z = 1.65
DOI: 10.15468/dl.27cqcq
title: Occurrence Download

description: A dataset containing 38619 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Lamiastrum galeobdolon (L.) Ehrend. & Polatschek)"
 ]
}

 The dataset includes 38619 records from 313 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011087-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wkjcbe
title: Occurrence Download

description: A dataset containing 3712565 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Anas acuta Linnaeus, 1758)"
 ]
}

 The dataset includes 3712565 records from 1200 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011069-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qmjwul
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Chuquiraga rosulata Gaspar",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 38 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014171-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vmpvjn
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Claoxylon scabratum (Pax & K.Hoffm.) Airy Shaw"
 ]
}

 The dataset includes 37 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003605-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wvdpn2
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Capsella schaffneri S.Watson"
 ]
}

 The dataset includes 14 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045956-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wp3wks
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Chile",
 "Country is Argentina"
 ]
 },
 "TaxonKey is Lasiurus varius (Poeppig, 1835)"
 ]
}

 The dataset includes 66 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014172-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wsc3ru
title: Occurrence Download

description: A dataset containing 1065 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Cerasophila thompsoni Bingham, 1900"
 ]
}

 The dataset includes 1065 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003598-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zh66zf
title: Occurrence Download

description: A dataset containing 760 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Pl@ntNet automatically identified occurrences",
 "GadmGid is USA.39.45_1",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 760 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0114635-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k86joj
title: Occurrence Download

description: A dataset containing 122 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trimeresurus trigonocephalus (Latreille, 1801)"
 ]
}

 The dataset includes 122 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014174-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dn8hte
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Claoxylon subsessiliflorum Croizat"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003647-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6sdbgh
title: Occurrence Download

description: A dataset containing 3715 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Crocodylus moreletii (Duméril & Bibron, 1851)"
 ]
}

 The dataset includes 3715 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014175-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k87492
title: Occurrence Download

description: A dataset containing 3149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-13.51538 49.42896,2.16437 49.42896,2.16437 59.42788,-13.51538 59.42788,-13.51538 49.42896))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "Month is September",
 "Month is April"
 ]
 },
 "TaxonKey is Buteo buteo (Linnaeus, 1758)",
 "Year 2018-2018"
 ]
}

 The dataset includes 3149 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0197824-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g5d7f8
title: Occurrence Download

description: A dataset containing 387505 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Capsella bursa-pastoris (L.) Medik."
 ]
}

 The dataset includes 387505 records from 1175 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105205-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2ggwsm
title: CCDC 2278431: Experimental Crystal Structure Determination

description: Related Article: Xueqing Hu, Yunxu Zhao, Tong He, Caoyue Niu, Feipeng Liu, Wei Jia, Yi Mu, Xingwei Li, Zi-Qiang Rong|2024|Chemical Science|15|13541|doi:10.1039/D4SC01837K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gn6r3
title: CCDC 2283545: Experimental Crystal Structure Determination

description: Related Article: Xueqing Hu, Yunxu Zhao, Tong He, Caoyue Niu, Feipeng Liu, Wei Jia, Yi Mu, Xingwei Li, Zi-Qiang Rong|2024|Chemical Science|15|13541|doi:10.1039/D4SC01837K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hjbft
title: CCDC 2309606: Experimental Crystal Structure Determination

description: Related Article: Xueqing Hu, Yunxu Zhao, Tong He, Caoyue Niu, Feipeng Liu, Wei Jia, Yi Mu, Xingwei Li, Zi-Qiang Rong|2024|Chemical Science|15|13541|doi:10.1039/D4SC01837K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hjbgv
title: CCDC 2309607: Experimental Crystal Structure Determination

description: Related Article: Xueqing Hu, Yunxu Zhao, Tong He, Caoyue Niu, Feipeng Liu, Wei Jia, Yi Mu, Xingwei Li, Zi-Qiang Rong|2024|Chemical Science|15|13541|doi:10.1039/D4SC01837K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.9fe7va
title: Occurrence Download

description: A dataset containing 18035 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hibiscus trionum L."
 ]
}

 The dataset includes 18035 records from 467 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000054-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sa3r88
title: Occurrence Download

description: A dataset containing 25177 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euphorbia prostrata Aiton"
 ]
}

 The dataset includes 25177 records from 755 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000052-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13711231
title: Multisensory Number Channels Derived from Individual Differences

description: This is the dataset related to the article: "Multisensory Number Channels Derived from Individual Differences"

The file contains subjects data for the three experiments

sub_ID is the participant's identification numberThe subsequent columns indicate Wfs for each tested numerosity in each experiment.

M = Digit to Actions TaskF  = Digit to Visual Sequence TaskD = Visual Dot estimation TaskE.g. M10 indicates the Wf measured for that subjects with tested number 10 in the Motor condition
DOI: 10.5281/zenodo.13711232
title: Multisensory Number Channels Derived from Individual Differences

description: This is the dataset related to the article: "Multisensory Number Channels Derived from Individual Differences"

The file contains subjects data for the three experiments

sub_ID is the participant's identification numberThe subsequent columns indicate Wfs for each tested numerosity in each experiment.

M = Digit to Actions TaskF  = Digit to Visual Sequence TaskD = Visual Dot estimation TaskE.g. M10 indicates the Wf measured for that subjects with tested number 10 in the Motor condition
DOI: 10.5281/zenodo.13711380
title: Spidroin and Hox Annotations for Schöneberg et al. (accepted)

description: This repository contains the data and scripts to recreate the spidroin and hox annotations used for Schöneberg et al., (accepted) : Three novel Spider Genomes unveil Spidroin Diversification and Hox Cluster Architecture: Ryuthela nishihirai (Liphistiidae), Uloborus plumipes (Uloboridae) and Cheiracanthium punctorium (Cheiracanthiidae).

The files ending with _hmmer_profiles.tar.gz contain the hmmer profiles used to run nhmmer and the files ending with _nhmmer_results.tar.gz contain the corresponding results for spidroin and hox genes, respectively. Further, there are three python scripts containing the code used to summarize, filter and annotate the spidroin and hox genes. In order to recreate the spidroin results, both the profiles and results tar-balls need to be unpacked. Then, run the script spidroin_summarize_hmmer.py and subsequently the analyse_spidroins.py script. For recreating the hox annotations, unpack the profile and results tar-balls and run the analyse_hox_genes.py script.
DOI: 10.5281/zenodo.13711381
title: Spidroin and Hox Annotations for Schöneberg et al. (accepted)

description: This repository contains the data and scripts to recreate the spidroin and hox annotations used for Schöneberg et al., (accepted) : Three novel Spider Genomes unveil Spidroin Diversification and Hox Cluster Architecture: Ryuthela nishihirai (Liphistiidae), Uloborus plumipes (Uloboridae) and Cheiracanthium punctorium (Cheiracanthiidae).

The files ending with _hmmer_profiles.tar.gz contain the hmmer profiles used to run nhmmer and the files ending with _nhmmer_results.tar.gz contain the corresponding results for spidroin and hox genes, respectively. Further, there are three python scripts containing the code used to summarize, filter and annotate the spidroin and hox genes. In order to recreate the spidroin results, both the profiles and results tar-balls need to be unpacked. Then, run the script spidroin_summarize_hmmer.py and subsequently the analyse_spidroins.py script. For recreating the hox annotations, unpack the profile and results tar-balls and run the analyse_hox_genes.py script.
DOI: 10.4121/21892a06-078a-4600-8386-1abe46f42271.v4
title: Data underlying the publication: Seed tuber microbiome is a predictor of next-season potato vigor

description: This dataset accompanies the paper "Seed tuber microbiome is a predictor of next-season potato vigor". The dataset includes drone images (.npy), arrays of lot boundaries (.npy) and canopy surface area measurements for potato plants in 2 separate years and 3 separate fields. The included script loads an image, crops a specific plot and applies the segmentation procedure to said plot. The accompanying protocol describes the techniques employed to obtain the measurements from RGB drone images of the fields.
DOI: 10.5281/zenodo.13711392
title: In-Situ Aircraft Observations from North China on May 22, 2017 for AAS

description: dataset for Airborne Investigation of Riming: Cloud and Precipitation Microphysics Within a Weak Convective System in North China
DOI: 10.5281/zenodo.13711393
title: In-Situ Aircraft Observations from North China on May 22, 2017 for AAS

description: dataset for Airborne Investigation of Riming: Cloud and Precipitation Microphysics Within a Weak Convective System in North China
DOI: 10.5281/zenodo.13628750
title: Household surveys in four informal settlements in Abidjan (Côte d'Ivoire) and Nairobi (Kenya)

description: Description: Latest release of data (anonymized) collected in informal settlements in Côte d'Ivoire and Kenya during my PhD thesis, with the respective metadata (questionnaire files). Please note that some data (geolocation, specific age of participant, and health facilities used) have been ommitted due to personal data protection concerns.

Includes: Data (CSV), questonnaires (XLS), and Jupyter notebooks summarizing the data (using Python).

Ethical clearance: We obtained ethical clearance in Switzerland from EPFL’s HREC (decision n° 068-2020), in Kenya from KEMRI (KEMRI/RES/7/3/1) and the National Commission for Science, Technology & Innovation (NACOSTI/P/21/10921), and in Côte d’Ivoire from the National Health and Life Sciences Ethics Committee (Comité National d’Éthique des Sciences de la Vie et de la Santé, ref. n° 005-22/MSHPCMU/CNESVS-km).

Citation: Pessoa Colombo V. Relating health benefits of water, sanitation, and hygiene services with the context of urban informal settlements: lessons from Côte d'Ivoire and Kenya. PhD thesis. EPFL: Lausanne. 2023. https://doi.org/10.5075/epfl-thesis-10143
DOI: 10.5281/zenodo.13628751
title: Household surveys in four informal settlements in Abidjan (Côte d'Ivoire) and Nairobi (Kenya)

description: Description: First release of data collected in four informal settlements in Côte d'Ivoire and Kenya during my PhD thesis.

Includes: data (CSV files), questonnaires (XLS files, which also serve as dictionnaire for the variables in the CSV files), and Jupyter notebooks summarizing the data (using Python).

Citation: Pessoa Colombo V. Relating health benefits of water, sanitation, and hygiene services with the context of urban informal settlements: lessons from Côte d'Ivoire and Kenya. PhD thesis. EPFL: Lausanne. 2023. https://doi.org/10.5075/epfl-thesis-10143
DOI: 10.5281/zenodo.13694100
title: Household surveys in four informal settlements in Abidjan (Côte d'Ivoire) and Nairobi (Kenya)

description: Description: Former release (v.1.0.1) of data collected in informal settlements in Côte d'Ivoire and Kenya during my PhD thesis, with the respective metadata (questionnaire files). Please note that some data (geolocation and health facilities used) have been ommited due to personal data protection concerns.

Includes: data (CSV), questonnaires (XLS), and Jupyter notebooks summarizing the data (using Python).

Citation: Pessoa Colombo V. Relating health benefits of water, sanitation, and hygiene services with the context of urban informal settlements: lessons from Côte d'Ivoire and Kenya. PhD thesis. EPFL: Lausanne. 2023. https://doi.org/10.5075/epfl-thesis-10143
DOI: 10.5281/zenodo.13711300
title: Household surveys in four informal settlements in Abidjan (Côte d'Ivoire) and Nairobi (Kenya)

description: Description: Latest release of data (anonymized) collected in informal settlements in Côte d'Ivoire and Kenya during my PhD thesis, with the respective metadata (questionnaire files). Please note that some data (geolocation, specific age of participant, and health facilities used) have been ommitted due to personal data protection concerns.

Includes: Data (CSV), questonnaires (XLS), and Jupyter notebooks summarizing the data (using Python).

Ethical clearance: We obtained ethical clearance in Switzerland from EPFL’s HREC (decision n° 068-2020), in Kenya from KEMRI (KEMRI/RES/7/3/1) and the National Commission for Science, Technology & Innovation (NACOSTI/P/21/10921), and in Côte d’Ivoire from the National Health and Life Sciences Ethics Committee (Comité National d’Éthique des Sciences de la Vie et de la Santé, ref. n° 005-22/MSHPCMU/CNESVS-km).

Citation: Pessoa Colombo V. Relating health benefits of water, sanitation, and hygiene services with the context of urban informal settlements: lessons from Côte d'Ivoire and Kenya. PhD thesis. EPFL: Lausanne. 2023. https://doi.org/10.5075/epfl-thesis-10143
DOI: 10.5281/zenodo.13709734
title: Toxicity of Large and Small Surface-Engineered Upconverting Nanoparticles for In Vitro and In Vivo Bioapplications
DOI: 10.5281/zenodo.13709735
title: Toxicity of Large and Small Surface-Engineered Upconverting Nanoparticles for In Vitro and In Vivo Bioapplications
DOI: 10.15468/dl.duxvgt
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lolium temulentum var. arvense (With.) Bab."
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000057-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.387njs
title: Occurrence Download

description: A dataset containing 78435 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidium didymum L."
 ]
}

 The dataset includes 78435 records from 965 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000056-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ah3ddc
title: Occurrence Download

description: A dataset containing 503 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Clarkia williamsonii (Durand & Hilg.) F.H.Lewis & M.E.Lewis"
 ]
}

 The dataset includes 503 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147612-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.