cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25116959.v1
title: Supplementary Material for: Respiratory Syncytial Virus Maternal Vaccination in Infants below 6 Months of Age: Meta-Analysis of Safety, Immunogenicity, and Efficacy

description: <b><i>Introduction:</i></b> Severe respiratory syncytial virus (RSV) disease is most prevalent during infancy, particularly in those born prematurely, who benefit least from maternal antibody transfers. Maternal immunization is an attractive prevention leading to vaccine clinical trials. This meta-analysis aimed to evaluate recent maternal RSV vaccine trials. <b><i>Methods:</i></b> Following PRISMA-P guidelines for systematic reviews and registered at https://www.crd.york.ac.uk/prospero, this study shortlisted six randomized clinical trials of suitable quality from four databases. Meta-analysis evaluated vaccine safety, immunogenicity, and efficacy in infants and their mothers. <b><i>Results:</i></b> From random-effects and fixed-effects meta-analysis between trial and control arms, the maternal post-vaccination geometric antibody (Ab) titers showed pooled standard mean differences (SMDs [95% CI]) at delivery of (4.14 [2.91–5.37]), (3.95 [2.79–5.11]), and (12.20 [7.76, 16.64]) for RSV neutralizing Ab A, B, and F IgG, respectively. Vaccine administration was more likely than placebo to cause local pain, erythema, swelling, and systemic myalgia. Furthermore, the Ab levels in infants at birth showed pooled SMDs of each RSV A (3.9 [2.81–4.99]), RSV B (1.86 [1.09–2.62]), and RSV F IgG (2.24 [1.24–3.23]). The overall reduction of RSV-related lower respiratory tract infections and hospitalizations in the first 6 months of life was 52% and 48%, respectively. <b><i>Conclusions:</i></b> Not only does antenatal RSV vaccination look safe and immunogenic in vaccinated mothers, but it also reliably provides effective antibody levels in infants and diminishes RSV-related severe disease in infants under 6 months of age.
DOI: 10.5281/zenodo.10581736
title: Gene-expression memory-based lineage prediction of cell lineages from scRNA-seq datasets

description: This dataset contains the R code and source data to generate the main figures of the associated publication. For every figure panel one folder is given containing both the R code to generate the respective plot/image and the input data.

The associated publication describes the computational tool Gene-Expression Memory-based Lineage Inference (GEMLI) to annotate cells related over several cell divisions (small and mid-sized lineages) in scRNA-seq data. The basis of GEMLI is gene expression memory, the stability of expression of "memory genes" across cell divisions. Lineage assignment using GEMLI allows to study heritable gene expression, to discriminate symmetric and asymmetric cell fate decisions and to reconstruct individual multicellular structures from pooled scRNA-seq datasets. GEMLI is avialable as R package on GitHub (https://github.com/UPSUTER/GEMLI).

The code and data avalailable makes it possible to reproduce all analyses of memory genes and GEMLI lineage predictions shown in the main figures of the associated publication. This corresponds to analyses of public lineage-annotated ground truth scRNA-seq datasets of diverse cell types (mESC GSE226169, MEF GSE99915, CD8 and L1210 GSE74923, HSC GSE67317, WM989 GSE237228, pancreatic metastases GSE173958, intestinal crypts and organoids GSE140802, bone marrow cells and K562 GSE182685). Further GEMLI predictions and further analysis of one paired Xenium and scFFPE-seq dataset of human breast cancer (GSE243280) is shown. See also the associated publication.
DOI: 10.5281/zenodo.10581737
title: Gene-expression memory-based lineage prediction of cell lineages from scRNA-seq datasets

description: This dataset contains the R code and source data to generate the main figures of the associated publication. For every figure panel one folder is given containing both the R code to generate the respective plot/image and the input data.

The associated publication describes the computational tool Gene-Expression Memory-based Lineage Inference (GEMLI) to annotate cells related over several cell divisions (small and mid-sized lineages) in scRNA-seq data. The basis of GEMLI is gene expression memory, the stability of expression of "memory genes" across cell divisions. Lineage assignment using GEMLI allows to study heritable gene expression, to discriminate symmetric and asymmetric cell fate decisions and to reconstruct individual multicellular structures from pooled scRNA-seq datasets. GEMLI is avialable as R package on GitHub (https://github.com/UPSUTER/GEMLI).

The code and data avalailable makes it possible to reproduce all analyses of memory genes and GEMLI lineage predictions shown in the main figures of the associated publication. This corresponds to analyses of public lineage-annotated ground truth scRNA-seq datasets of diverse cell types (mESC GSE226169, MEF GSE99915, CD8 and L1210 GSE74923, HSC GSE67317, WM989 GSE237228, pancreatic metastases GSE173958, intestinal crypts and organoids GSE140802, bone marrow cells and K562 GSE182685). Further GEMLI predictions and further analysis of one paired Xenium and scFFPE-seq dataset of human breast cancer (GSE243280) is shown. See also the associated publication.
DOI: 10.6084/m9.figshare.23283908
title: Dataset S0

description: Merged scRNA-seq datasetsmerged_7_sc_datasets_log2cpm1p.h5ad: merged 7 scRNA-seq datasetsmerged_12_sc_datasets_231003.h5ad: merged 12 scRNA-seq datasets<br>
DOI: 10.6084/m9.figshare.23283908.v1
title: Dataset S0

description: Merged scRNA-seq datasets
DOI: 10.6084/m9.figshare.23283908.v2
title: Dataset S0

description: Merged scRNA-seq datasetsmerged_7_sc_datasets_log2cpm1p.h5ad: merged 7 scRNA-seq datasetsmerged_12_sc_datasets_231003.h5ad: merged 12 scRNA-seq datasets<br>
DOI: 10.5281/zenodo.10510009
title: Linked collectors and determiners for: Gibbalaria: A new genus of Olethreutini from the Afrotropical Region (Lepidoptera: Tortricidae: Olethreutinae), and a new combination in Cosmopoda Diakonoff.

description: Natural history specimen data linked to collectors and determiners held within, "Gibbalaria: A new genus of Olethreutini from the Afrotropical Region (Lepidoptera: Tortricidae: Olethreutinae), and a new combination in Cosmopoda Diakonoff". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/8c282ab2-3f26-45ca-a990-4258d37c92c8 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/8c282ab2-3f26-45ca-a990-4258d37c92c8. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10510008
title: Linked collectors and determiners for: Gibbalaria: A new genus of Olethreutini from the Afrotropical Region (Lepidoptera: Tortricidae: Olethreutinae), and a new combination in Cosmopoda Diakonoff.

description: Natural history specimen data linked to collectors and determiners held within, "Gibbalaria: A new genus of Olethreutini from the Afrotropical Region (Lepidoptera: Tortricidae: Olethreutinae), and a new combination in Cosmopoda Diakonoff". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/8c282ab2-3f26-45ca-a990-4258d37c92c8 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/8c282ab2-3f26-45ca-a990-4258d37c92c8. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10597469
title: Linked collectors and determiners for: Gibbalaria: A new genus of Olethreutini from the Afrotropical Region (Lepidoptera: Tortricidae: Olethreutinae), and a new combination in Cosmopoda Diakonoff.

description: Natural history specimen data linked to collectors and determiners held within, "Gibbalaria: A new genus of Olethreutini from the Afrotropical Region (Lepidoptera: Tortricidae: Olethreutinae), and a new combination in Cosmopoda Diakonoff". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/8c282ab2-3f26-45ca-a990-4258d37c92c8 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/8c282ab2-3f26-45ca-a990-4258d37c92c8. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10510052
title: Linked collectors and determiners for: A taxonomic revision of Taraxacum sect. Dissecta, a continental steppe group common in Siberia and adjacent regions of Central Asia.

description: Natural history specimen data linked to collectors and determiners held within, "A taxonomic revision of Taraxacum sect. Dissecta, a continental steppe group common in Siberia and adjacent regions of Central Asia". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/d29c6e9c-974f-4843-ae57-f7677e719937 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/d29c6e9c-974f-4843-ae57-f7677e719937. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10510053
title: Linked collectors and determiners for: A taxonomic revision of Taraxacum sect. Dissecta, a continental steppe group common in Siberia and adjacent regions of Central Asia.

description: Natural history specimen data linked to collectors and determiners held within, "A taxonomic revision of Taraxacum sect. Dissecta, a continental steppe group common in Siberia and adjacent regions of Central Asia". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/d29c6e9c-974f-4843-ae57-f7677e719937 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/d29c6e9c-974f-4843-ae57-f7677e719937. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10597499
title: Linked collectors and determiners for: A taxonomic revision of Taraxacum sect. Dissecta, a continental steppe group common in Siberia and adjacent regions of Central Asia.

description: Natural history specimen data linked to collectors and determiners held within, "A taxonomic revision of Taraxacum sect. Dissecta, a continental steppe group common in Siberia and adjacent regions of Central Asia". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/d29c6e9c-974f-4843-ae57-f7677e719937 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/d29c6e9c-974f-4843-ae57-f7677e719937. Formatted as a Frictionless Data package.
DOI: 10.4121/6084160b-3515-41f4-982f-9f1dc42bd7fc
title: Dataset for "Deposition and Corrosion Performance of Phosphate-Polylactic Acid Composite Coatings on WE43 Magnesium Alloy"

description: This dataset contains raw data related to phosphate chemical conversion coatings (CaP), polylactic acid (PLA) biopolymer coatings, and combined CaP-PLA bilayer coatings obtained on the surface of the commercial WE43 Mg alloy. The data is associated with the article "Deposition and Corrosion Performance of Phosphate-Polylactic Acid Composite Coatings on WE43 Magnesium Alloy", published in Surface & Coatings Technology. – 2024. – Vol. 478. – Article 130419. https://doi.org/10.1016/j.surfcoat.2024.130419. All data are provided under CC0 license. The dataset includes Scanning electron microscopy (.jpg format) and energy-dispersive X-ray spectroscopy data (.txt format), X-ray diffraction patterns (.csv format); X-ray photoelectron spectroscopy spectra (.vms format); Fourier-transform infrared spectra (.csv format); Electrochemical impedance spectra (.z format); Calculations in Medusa software (.dat and .wmf format). Dzmitry Kharytonau gratefully acknowledges the financial support of this study by the National Science Centre (Poland) under research Grant Sonatina no. 2021/40/C/ST5/00266.
DOI: 10.4121/6084160b-3515-41f4-982f-9f1dc42bd7fc.v1
title: Dataset for "Deposition and Corrosion Performance of Phosphate-Polylactic Acid Composite Coatings on WE43 Magnesium Alloy"

description: This dataset contains raw data related to phosphate chemical conversion coatings (CaP), polylactic acid (PLA) biopolymer coatings, and combined CaP-PLA bilayer coatings obtained on the surface of the commercial WE43 Mg alloy. The data is associated with the article "Deposition and Corrosion Performance of Phosphate-Polylactic Acid Composite Coatings on WE43 Magnesium Alloy", published in Surface & Coatings Technology. – 2024. – Vol. 478. – Article 130419. https://doi.org/10.1016/j.surfcoat.2024.130419. All data are provided under CC0 license. The dataset includes Scanning electron microscopy (.jpg format) and energy-dispersive X-ray spectroscopy data (.txt format), X-ray diffraction patterns (.csv format); X-ray photoelectron spectroscopy spectra (.vms format); Fourier-transform infrared spectra (.csv format); Electrochemical impedance spectra (.z format); Calculations in Medusa software (.dat and .wmf format). Dzmitry Kharytonau gratefully acknowledges the financial support of this study by the National Science Centre (Poland) under research Grant Sonatina no. 2021/40/C/ST5/00266.
DOI: 10.6084/m9.figshare.25112069
title: Supplementary Material for: The Development of Suspended Scattering Particles in Motion in a Patient with Exudative Reticular Pseudodrusen

description: The development and characteristics of suspended scattering particles in motion (SSPiMs) in a patient with exudative reticular pseudodrusen (ERPD) are reported using multimodal imaging modalities. An 82-year-old woman was referred because of persistent macular edema during intravitreal injections of bevacizumab. ERPD associated with types I and II (mixed type) macular neovascularization in both eyes was diagnosed. Bilateral flat irregular pigment epithelial detachments were associated with macular neovascularization in both eyes by optical coherence tomography. An intense oval hypersignal was found at umbo in her right eye, as detected by <i>en face</i> optical coherence tomography angiography. This avascular hypersignal at umbo was SSPiM. No change was noticed in the appearance of SSPiM after intravitreal injection of aflibercept. However, intraretinal hemorrhage developed in Henle’s fiber layer a month after the second intravitreal injection of aflibercept. Then, several SSPiMs were unveiled in a perifoveal location a month after uncomplicated cataract surgery. The SSPiMs that developed after cataract surgery were connected to the capillaries in the deep retinal vascular plexus. Temporary SSPiMs could be seen during injections of anti-vascular endothelial growth factor and after cataract surgery in the same eye of a patient with ERPD. SSPiMs detected by optical coherence tomography angiography were neither artifacts nor hypersignals due to neovascularized vessels. SSPiMs were considered to be a unique phase colloidal phenomenon generating pseudoflow in exudative macular disorders.
DOI: 10.5281/zenodo.10510114
title: Linked collectors and determiners for: Redescription of the Guiana Shield Darter Species Characidium crandellii and C. declivirostre (Crenuchidae) with Descriptions of Two New Species.

description: Natural history specimen data linked to collectors and determiners held within, "Redescription of the Guiana Shield Darter Species Characidium crandellii and C. declivirostre (Crenuchidae) with Descriptions of Two New Species". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/55b94d5d-f92c-4a0e-9330-11117c6616a0 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/55b94d5d-f92c-4a0e-9330-11117c6616a0. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10510115
title: Linked collectors and determiners for: Redescription of the Guiana Shield Darter Species Characidium crandellii and C. declivirostre (Crenuchidae) with Descriptions of Two New Species.

description: Natural history specimen data linked to collectors and determiners held within, "Redescription of the Guiana Shield Darter Species Characidium crandellii and C. declivirostre (Crenuchidae) with Descriptions of Two New Species". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/55b94d5d-f92c-4a0e-9330-11117c6616a0 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/55b94d5d-f92c-4a0e-9330-11117c6616a0. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10597530
title: Linked collectors and determiners for: Redescription of the Guiana Shield Darter Species Characidium crandellii and C. declivirostre (Crenuchidae) with Descriptions of Two New Species.

description: Natural history specimen data linked to collectors and determiners held within, "Redescription of the Guiana Shield Darter Species Characidium crandellii and C. declivirostre (Crenuchidae) with Descriptions of Two New Species". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/55b94d5d-f92c-4a0e-9330-11117c6616a0 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/55b94d5d-f92c-4a0e-9330-11117c6616a0. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10510134
title: Linked collectors and determiners for: Reinstatement of Aloe candelabrum A. Berger (Asphodelaceae: Alooideae), a tree-like aloe of KwaZulu-Natal province, South Africa.

description: Natural history specimen data linked to collectors and determiners held within, "Reinstatement of Aloe candelabrum A. Berger (Asphodelaceae: Alooideae), a tree-like aloe of KwaZulu-Natal province, South Africa". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/7e1e4683-3300-49f6-9ce5-6f36601c7ab2 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/7e1e4683-3300-49f6-9ce5-6f36601c7ab2. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10510135
title: Linked collectors and determiners for: Reinstatement of Aloe candelabrum A. Berger (Asphodelaceae: Alooideae), a tree-like aloe of KwaZulu-Natal province, South Africa.

description: Natural history specimen data linked to collectors and determiners held within, "Reinstatement of Aloe candelabrum A. Berger (Asphodelaceae: Alooideae), a tree-like aloe of KwaZulu-Natal province, South Africa". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/7e1e4683-3300-49f6-9ce5-6f36601c7ab2 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/7e1e4683-3300-49f6-9ce5-6f36601c7ab2. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10597539
title: Linked collectors and determiners for: Reinstatement of Aloe candelabrum A. Berger (Asphodelaceae: Alooideae), a tree-like aloe of KwaZulu-Natal province, South Africa.

description: Natural history specimen data linked to collectors and determiners held within, "Reinstatement of Aloe candelabrum A. Berger (Asphodelaceae: Alooideae), a tree-like aloe of KwaZulu-Natal province, South Africa". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/7e1e4683-3300-49f6-9ce5-6f36601c7ab2 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/7e1e4683-3300-49f6-9ce5-6f36601c7ab2. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10510156
title: Linked collectors and determiners for: Revision of Australian Ectomocoris with the description of nine new species (Hemiptera: Heteroptera: Reduviidae).

description: Natural history specimen data linked to collectors and determiners held within, "Revision of Australian Ectomocoris with the description of nine new species (Hemiptera: Heteroptera: Reduviidae)". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/a38691f7-9c36-4213-a9c0-692717de7eb9 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/a38691f7-9c36-4213-a9c0-692717de7eb9. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10510157
title: Linked collectors and determiners for: Revision of Australian Ectomocoris with the description of nine new species (Hemiptera: Heteroptera: Reduviidae).

description: Natural history specimen data linked to collectors and determiners held within, "Revision of Australian Ectomocoris with the description of nine new species (Hemiptera: Heteroptera: Reduviidae)". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/a38691f7-9c36-4213-a9c0-692717de7eb9 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/a38691f7-9c36-4213-a9c0-692717de7eb9. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10597549
title: Linked collectors and determiners for: Revision of Australian Ectomocoris with the description of nine new species (Hemiptera: Heteroptera: Reduviidae).

description: Natural history specimen data linked to collectors and determiners held within, "Revision of Australian Ectomocoris with the description of nine new species (Hemiptera: Heteroptera: Reduviidae)". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/a38691f7-9c36-4213-a9c0-692717de7eb9 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/a38691f7-9c36-4213-a9c0-692717de7eb9. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10510170
title: Linked collectors and determiners for: The taxonomy of aloe xspinosissima hort. ex a. berger (asphodelaceae), a popular hybrid aloe from mediterranean Europe.

description: Natural history specimen data linked to collectors and determiners held within, "The taxonomy of aloe xspinosissima hort. ex a. berger (asphodelaceae), a popular hybrid aloe from mediterranean Europe". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/bed395ed-3217-45e6-8e37-9d47822f2ded using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/bed395ed-3217-45e6-8e37-9d47822f2ded. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10510171
title: Linked collectors and determiners for: The taxonomy of aloe xspinosissima hort. ex a. berger (asphodelaceae), a popular hybrid aloe from mediterranean Europe.

description: Natural history specimen data linked to collectors and determiners held within, "The taxonomy of aloe xspinosissima hort. ex a. berger (asphodelaceae), a popular hybrid aloe from mediterranean Europe". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/bed395ed-3217-45e6-8e37-9d47822f2ded using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/bed395ed-3217-45e6-8e37-9d47822f2ded. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10597555
title: Linked collectors and determiners for: The taxonomy of aloe xspinosissima hort. ex a. berger (asphodelaceae), a popular hybrid aloe from mediterranean Europe.

description: Natural history specimen data linked to collectors and determiners held within, "The taxonomy of aloe xspinosissima hort. ex a. berger (asphodelaceae), a popular hybrid aloe from mediterranean Europe". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/bed395ed-3217-45e6-8e37-9d47822f2ded using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/bed395ed-3217-45e6-8e37-9d47822f2ded. Formatted as a Frictionless Data package.