cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.aqayaj
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Allium rude J.M.Xu"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180392-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3jvyuc
title: Occurrence Download

description: A dataset containing 1290 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Macrobrachium carcinus (Linnaeus, 1758)"
 ]
}

 The dataset includes 1290 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003473-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.didgtc
title: Occurrence Download

description: A dataset containing 4353 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carlina acaulis L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4353 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000367-150407101314760/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h5tmzw
title: Occurrence Download

description: A dataset listing the 36 species recorded in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Seabird observations from the northern section of the Great Barrier Reef, Australia (1991-1996)",
 "Geometry POLYGON((125.83723 -21.25579,162.16277 -21.25579,162.16277 -6.74421,125.83723 -6.74421,125.83723 -21.25579))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 36 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016706-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mmvnha
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Allium macranthum Baker"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180398-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4rbuk3
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Allium macrostemon Bunge"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180399-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lglpo3
title: Occurrence Download

description: A dataset containing 7400 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Galium sylvaticum L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7400 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000367-150410134957023/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7b5rxe
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ditassa obovata (Holm) Morillo"
 ]
}

 The dataset includes 20 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182027-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w92ej7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apterygiformes",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182016-230224095556074/datasets/export for details.
DOI: 10.15468/dl.en3qkw
title: Occurrence Download

description: A dataset containing 3112 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ambrosia trifida L."
 ]
}

 The dataset includes 3112 records from 166 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000367-150504100648427/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nzqkec
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neoregelia capixaba E.Pereira & Leme"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0183785-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vrycbd
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((112.32861 23.95679,113.20752 23.02515,114.15674 22.7439,116.47705 23.35913,117.8877 24.4292,119.13135 25.80249,120.1333 27.2439,120.44971 29.68726,119.46533 32.23608,117.18018 32.85132,115.36963 32.85132,113.96338 32.71069,112.06494 32.11304,111.01025 28.89624,111.23877 26.61108,111.2915 25.64429,112.32861 23.95679))",
 "TaxonKey is Protobothrops cornutus (Smith, 1930)"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040179-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cwd4jz
title: Occurrence Download

description: A dataset containing 1531 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Danaus plexippus (Linnaeus, 1758)",
 "Country is Mexico",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1531 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000367-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rq2bew
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ditassa olivaestevae Morillo"
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0182032-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5dlcbo
title: Occurrence Download

description: A dataset containing 47362 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Erannis defoliaria (Clerck, 1759)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 47362 records from 182 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029586-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25622025
title: <i>Pseudococcus jackbeardsleyi </i>genome annotation

description: Jack Beardsley mealybug (<i>Pseudococcus jackbeardsleyi </i>Gimpel and Miller) as one of the hazardous invasive pests, it could cause enormous losses to the fruit and vegetable industries worldwide. In this study, we assembled and annotated<i> P. jackbeardsleyi</i> genome at the chromosome level, which had a genome size of 334.818 Mb and achieved a completeness level of 95.7%, 10,908 genes were annotated totally.
DOI: 10.15468/dl.ed9uo5
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acanthinophyllum Allemão"
 ]
}

 The dataset includes 11 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000367-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t8wr88
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pilosella officinarum Vaill.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1900",
 "BasisOfRecord is one of (Specimen)",
 "Country is one of (Australia)",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than or equal to 20000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 17 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003467-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3unwsf
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Allium sikkimense Baker"
 ]
}

 The dataset includes 23 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180425-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r25h7n
title: Occurrence Download

description: A dataset containing 5219280 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Japan",
 "OccurrenceStatus is Present",
 "Year 1993-2023"
 ]
}

 The dataset includes 5219280 records from 1644 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016709-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xfgd2u
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cirsium arvense",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 114 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016363-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5pf7n
title: Occurrence Download

description: A dataset containing 2488 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Atta mexicana",
 "Year 2022-2025"
 ]
}

 The dataset includes 2488 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016362-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v29f5j
title: Occurrence Download

description: A dataset containing 15847 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Vinca difformis"
 ]
}

 The dataset includes 15847 records from 139 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016361-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gydnuc
title: Occurrence Download

description: A dataset containing 36650939 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 36650939 records from 10103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016320-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.17798327
title: Additional file 5 of Assessing reproducibility of inherited variants detected with short-read whole genome sequencing

description: Additional file 5: Table S5. Deletion number.
DOI: 10.6084/m9.figshare.17798327.v1
title: Additional file 5 of Assessing reproducibility of inherited variants detected with short-read whole genome sequencing

description: Additional file 5: Table S5. Deletion number.
DOI: 10.6084/m9.figshare.17798345
title: Additional file 7 of Assessing reproducibility of inherited variants detected with short-read whole genome sequencing

description: Additional file 7: Table S7. Highly reproducible beds.
DOI: 10.25919/4ycb-qy30
title: Parkes observations for project P1050 semester 2023OCTS_10

description: This is a request for the observation time for the timing campaign of new pulsars discovered in the reprocessing of the low-latitude Galactic plane section of the HTRU-S survey (HTRU-S LowLat) and the Parkes Multibeam Pulsar Survey (PMPS). We have completed 90 % of the HTRU-S LowLat survey and completed zero acceleration PMPS search with GPU-based coherent acceleration search, template bank, and fast folding algorithm pipelines and now have discovered 112 previously unknown pulsars among which 18 were found in the PMPS. Interesting science can usually only be derived from a new pulsar after confirmation, and a follow-up timing campaign is carried out. At least 1-2 year of initial timing is the minimum timespan required to fully characterise any newly-discovered pulsars, essential for deriving pulsar parameters such as the characteristic age, magnetic field strength, and spin-down rate, as well as for detecting any unexpected behaviour of the pulsar which might result from emission instabilities. This project is necessary for the timing of several interesting pulsars, including binary pulsars, high DM pulsars, scattered profile pulsars, and bright ones that show emissions in larger bandwidths in the UWL band. Apart from this, finding the nature of a unique binary pulsar system via a dedicated observing campaign is also another goal. The follow-up timing in semester 2023OCTS will assist in completing many exciting large-term science goals.
DOI: 10.6084/m9.figshare.17798345.v1
title: Additional file 7 of Assessing reproducibility of inherited variants detected with short-read whole genome sequencing

description: Additional file 7: Table S7. Highly reproducible beds.
DOI: 10.6084/m9.figshare.24089800
title: Semiparametrically Efficient Method for Enveloped Central Space

description: The estimation of the central space is at the core of the sufficient dimension reduction (SDR) literature. However, it is well known that the finite-sample estimation suffers from collinearity among predictors. Cook et al. (2013) proposed the predictor envelope method under linear models that can alleviate the problem by targeting a bigger space – which not only envelopes the central information, but also partitions the predictors by finding an uncorrelated set of material and immaterial predictors. One limitation of the predictor envelope is that it has strong distributional and modeling assumptions and therefore, it cannot be readily used in semiparametric settings where SDR usually nests. In this paper, we generalize the envelope model by defining the enveloped central space and propose a semiparametric method to estimate it. We derive the entire class of regular and asymptotically linear (RAL) estimators as well as the locally and globally semiparametrically efficient estimators for the enveloped central space. Based on the connection between predictor envelope and partial least square (PLS), our methods can also be used to calculate the PLS space beyond linearity. In the simulations, our methods are shown to be both robust and accurate for estimating the enveloped central space under different settings. Moreover, the downstream analysis using state-of-the-art methods such as machine learning (ML) methods has the potential to achieve much better predictions. We further illustrate our methods in a heart failure study. Keywords: Dimension Reduction; Envelope; Influence Functions; Partial Least Square; Semiparametric Efficiency.
DOI: 10.6084/m9.figshare.24089800.v1
title: Semiparametrically Efficient Method for Enveloped Central Space

description: The estimation of the central space is at the core of the sufficient dimension reduction (SDR) literature. However, it is well known that the finite-sample estimation suffers from collinearity among predictors. Cook et al. (2013) proposed the predictor envelope method under linear models that can alleviate the problem by targeting a bigger space – which not only envelopes the central information, but also partitions the predictors by finding an uncorrelated set of material and immaterial predictors. One limitation of the predictor envelope is that it has strong distributional and modeling assumptions and therefore, it cannot be readily used in semiparametric settings where SDR usually nests. In this paper, we generalize the envelope model by defining the enveloped central space and propose a semiparametric method to estimate it. We derive the entire class of regular and asymptotically linear (RAL) estimators as well as the locally and globally semiparametrically efficient estimators for the enveloped central space. Based on the connection between predictor envelope and partial least square (PLS), our methods can also be used to calculate the PLS space beyond linearity. In the simulations, our methods are shown to be both robust and accurate for estimating the enveloped central space under different settings. Moreover, the downstream analysis using state-of-the-art methods such as machine learning (ML) methods has the potential to achieve much better predictions. We further illustrate our methods in a heart failure study. Keywords: Dimension Reduction; Envelope; Influence Functions; Partial Least Square; Semiparametric Efficiency.
DOI: 10.6084/m9.figshare.25132427
title: Supplementary Material for: Pancreatic adenocarcinoma with co-occurrence of KRAS and EGFR mutations, case report and literature review

description: Introduction: Mutation in KRAS (Kristin ras sarcoma virus) oncogene is the main driver in pancreatic ductal adenocarcinoma (PDAC) and is present in nearly 90% of patients with PDAC. EGFR (epidermal growth factor receptor) mutation is rare in PDAC and is mostly present in the absence of KRAS mutation. Co-occurrence of KRAS and EGFR mutations is extremely rare, and the value of EGFR inhibition in these cases is unknown. Case Presentation: Here we present a case of metastatic PDAC with co-occurrence of KRAS G12V and EGFR L730R. Despite primary resistance to FOLFIRINOX (folinic acid, fluorouracil, irinotecan, oxaliplatin) and Gemcitabine/nab-paclitaxel, this patient had biochemical response (decrease in carbohydrate antigen (CA) 19-9), and disease control of seven months on Gemcitabine/Erlotinib (an EGFR inhibitor). This response is remarkable in the late-line PDAC treatment setting and is unusual after progression of the tumor on Gemcitabine/nab-paclitaxel chemotherapy. Conclusion: This case suggests that Gemcitabine/Erlotinib could be an effective treatment in patients with PDAC and co-occurrence of EGFR and KRAS mutations.
DOI: 10.6084/m9.figshare.25132427.v2
title: Supplementary Material for: Pancreatic adenocarcinoma with co-occurrence of KRAS and EGFR mutations, case report and literature review

description: Introduction: Mutation in KRAS (Kristin ras sarcoma virus) oncogene is the main driver in pancreatic ductal adenocarcinoma (PDAC) and is present in nearly 90% of patients with PDAC. EGFR (epidermal growth factor receptor) mutation is rare in PDAC and is mostly present in the absence of KRAS mutation. Co-occurrence of KRAS and EGFR mutations is extremely rare, and the value of EGFR inhibition in these cases is unknown. Case Presentation: Here we present a case of metastatic PDAC with co-occurrence of KRAS G12V and EGFR L730R. Despite primary resistance to FOLFIRINOX (folinic acid, fluorouracil, irinotecan, oxaliplatin) and Gemcitabine/nab-paclitaxel, this patient had biochemical response (decrease in carbohydrate antigen (CA) 19-9), and disease control of seven months on Gemcitabine/Erlotinib (an EGFR inhibitor). This response is remarkable in the late-line PDAC treatment setting and is unusual after progression of the tumor on Gemcitabine/nab-paclitaxel chemotherapy. Conclusion: This case suggests that Gemcitabine/Erlotinib could be an effective treatment in patients with PDAC and co-occurrence of EGFR and KRAS mutations.
DOI: 10.6084/m9.figshare.25132427.v3
title: Supplementary Material for: Pancreatic adenocarcinoma with co-occurrence of KRAS and EGFR mutations, case report and literature review

description: Introduction: Mutation in KRAS (Kristin ras sarcoma virus) oncogene is the main driver in pancreatic ductal adenocarcinoma (PDAC) and is present in nearly 90% of patients with PDAC. EGFR (epidermal growth factor receptor) mutation is rare in PDAC and is mostly present in the absence of KRAS mutation. Co-occurrence of KRAS and EGFR mutations is extremely rare, and the value of EGFR inhibition in these cases is unknown. Case Presentation: Here we present a case of metastatic PDAC with co-occurrence of KRAS G12V and EGFR L730R. Despite primary resistance to FOLFIRINOX (folinic acid, fluorouracil, irinotecan, oxaliplatin) and Gemcitabine/nab-paclitaxel, this patient had biochemical response (decrease in carbohydrate antigen (CA) 19-9), and disease control of seven months on Gemcitabine/Erlotinib (an EGFR inhibitor). This response is remarkable in the late-line PDAC treatment setting and is unusual after progression of the tumor on Gemcitabine/nab-paclitaxel chemotherapy. Conclusion: This case suggests that Gemcitabine/Erlotinib could be an effective treatment in patients with PDAC and co-occurrence of EGFR and KRAS mutations.
DOI: 10.6084/m9.figshare.17798106.v1
title: Additional file 12 of GM-CSF impairs erythropoiesis by disrupting erythroblastic island formation via macrophages

description: Additional file 12: Table S4. The differentially expressed genes between control and GM-CSF treated human macrophages.
DOI: 10.6084/m9.figshare.17798366
title: Additional file 9 of Assessing reproducibility of inherited variants detected with short-read whole genome sequencing

description: Additional file 9: Table S8. Comparison statistics to GIAB truth v4.0.
DOI: 10.6084/m9.figshare.17798366.v1
title: Additional file 9 of Assessing reproducibility of inherited variants detected with short-read whole genome sequencing

description: Additional file 9: Table S8. Comparison statistics to GIAB truth v4.0.
DOI: 10.48597/ss57-tgg6
title: Measurement of Inorganics in precipitation at Valle

description: Measurement of Inorganics in precipitation at Valle
DOI: 10.48597/ss72-5n35
title: Measurement of Inorganics in precipitation at Tveitdalen

description: Measurement of Inorganics in precipitation at Tveitdalen