cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1215917.10fu
title: SH1215917.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215920.10fu
title: SH1215920.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215922.10fu
title: SH1215922.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215926.10fu
title: SH1215926.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215937.10fu
title: SH1215937.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1215940.10fu
title: SH1215940.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.30656625
title: Pain beliefs, treatment expectations, and treatment experiences in spinal pain – a scoping review of qualitative studies

description: To provide a comprehensive overview of qualitative studies on three key perspectives of patients with nonspecific back and neck pain – pain beliefs, treatment expectations, treatment experiences, and their interaction. Literature search was conducted in PubMed and CINAHL and included articles from inception to 1 October 2025. Two reviewers screened the records for eligibility in a two-step process. Data were charted and synthesized narratively. Twenty-four studies involving a total of 666 participants were included. Most patients held biomedical pain beliefs and sought a specific diagnosis for their condition. Such a diagnosis influenced treatment expectations, which were in turn linked to previous treatment experiences. A need for pain validation, often expected to be confirmed through diagnostic imaging, emerged as an overarching theme. This need can be addressed by the health professionals’ empathy and genuine interest in participatory engagement, their perceived competence, e.g. reflected by a thorough physical examination, and their guidance toward patient self-management considering individual barriers. Patients’ beliefs, expectations, and experiences were connected by an underlying need for validation of their pain experience. Incorporating empathetic, individually tailored pain validation, distinct from solicitousness and mere reassurance, into spinal management might improve treatment satisfaction and outcomes. What is this article about? This review reports on what people with nonspecific back or neck pain believe regarding their pain, what they expect from treatment, and how they have experienced past treatments. The review included 24 studies with a total of 666 participants. What were the results? Many patients believed that their pain had a physical (biomedical) cause, such as a problem with bones or muscles. Because of this, they often wanted a clear medical diagnosis. These beliefs, along with previous treatment experiences, shaped what they expected from treatment. A key theme was the desire for their pain to be taken seriously and validated, often through imaging like X-rays or magnetic resonance imaging (MRI). Patients felt taken seriously when health professionals showed empathy, listened attentively, conducted thorough physical examinations, and collaborated with them to develop personalized strategies for managing the pain themselves. What do these results mean? Patients’ beliefs, expectations, and experiences are closely linked to their need for validation of their pain. When health professionals respond to this need in an individual and empathetic way – not just by offering generic reassurance – it can improve how satisfied patients are with their care and possibly lead to better outcomes.
DOI: 10.6084/m9.figshare.30656625.v1
title: Pain beliefs, treatment expectations, and treatment experiences in spinal pain – a scoping review of qualitative studies

description: To provide a comprehensive overview of qualitative studies on three key perspectives of patients with nonspecific back and neck pain – pain beliefs, treatment expectations, treatment experiences, and their interaction. Literature search was conducted in PubMed and CINAHL and included articles from inception to 1 October 2025. Two reviewers screened the records for eligibility in a two-step process. Data were charted and synthesized narratively. Twenty-four studies involving a total of 666 participants were included. Most patients held biomedical pain beliefs and sought a specific diagnosis for their condition. Such a diagnosis influenced treatment expectations, which were in turn linked to previous treatment experiences. A need for pain validation, often expected to be confirmed through diagnostic imaging, emerged as an overarching theme. This need can be addressed by the health professionals’ empathy and genuine interest in participatory engagement, their perceived competence, e.g. reflected by a thorough physical examination, and their guidance toward patient self-management considering individual barriers. Patients’ beliefs, expectations, and experiences were connected by an underlying need for validation of their pain experience. Incorporating empathetic, individually tailored pain validation, distinct from solicitousness and mere reassurance, into spinal management might improve treatment satisfaction and outcomes. What is this article about? This review reports on what people with nonspecific back or neck pain believe regarding their pain, what they expect from treatment, and how they have experienced past treatments. The review included 24 studies with a total of 666 participants. What were the results? Many patients believed that their pain had a physical (biomedical) cause, such as a problem with bones or muscles. Because of this, they often wanted a clear medical diagnosis. These beliefs, along with previous treatment experiences, shaped what they expected from treatment. A key theme was the desire for their pain to be taken seriously and validated, often through imaging like X-rays or magnetic resonance imaging (MRI). Patients felt taken seriously when health professionals showed empathy, listened attentively, conducted thorough physical examinations, and collaborated with them to develop personalized strategies for managing the pain themselves. What do these results mean? Patients’ beliefs, expectations, and experiences are closely linked to their need for validation of their pain. When health professionals respond to this need in an individual and empathetic way – not just by offering generic reassurance – it can improve how satisfied patients are with their care and possibly lead to better outcomes.
DOI: 10.15468/dl.kgpdt3
title: Occurrence Download

description: A dataset containing 109789 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alces alces",
 "Continent is Europe",
 "HasCoordinate is true"
 ]
}

 The dataset includes 109789 records from 119 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011503-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18481907
title: Filtered single cell RNA sequencing AnnData objects for Dictyostelium developmental synchronicity study (AX4, acaA, acaA pkaC)

description: DescriptionThis record contains filtered single cell RNA sequencing data from Dictyostelium discoideum used in the manuscript: “Early cyclic adenosine monophosphate signaling orchestrates single cell synchronicity throughout Dictyostelium development” by Katoh Kurasawa, Trnovec et al.

FilesThree AnnData objects in .h5ad format (compatible with Python and Scanpy) are provided:





AX4.h5ad




acaA.h5ad




acaA_pkaC.h5ad



Each file includes the filtered expression matrix and associated cell and gene metadata used for downstream analyses in the manuscript, including clustering, annotation, trajectory analyses, and synchronicity quantification.

Relationship to raw dataRaw sequencing data and primary submission files are available through the Gene Expression Omnibus repository under accession [GSE305468].

Reproducible analysis codeThe analysis pipeline corresponding to this dataset is archived as Zenodo software record https://doi.org/10.5281/zenodo.18481808 and is also available on GitHub at https://github.com/lenatr99/scRNA_dicty.

NotesThese .h5ad files represent processed and filtered data intended for analysis and figure reproduction. For full raw data and submission metadata, please use the Gene Expression Omnibus accession listed above.
DOI: 10.5281/zenodo.18481906
title: Filtered single cell RNA sequencing AnnData objects for Dictyostelium developmental synchronicity study (AX4, acaA, acaA pkaC)

description: DescriptionThis record contains filtered single cell RNA sequencing data from Dictyostelium discoideum used in the manuscript: “Early cyclic adenosine monophosphate signaling orchestrates single cell synchronicity throughout Dictyostelium development” by Katoh Kurasawa, Trnovec et al.

FilesThree AnnData objects in .h5ad format (compatible with Python and Scanpy) are provided:





AX4.h5ad




acaA.h5ad




acaA_pkaC.h5ad



Each file includes the filtered expression matrix and associated cell and gene metadata used for downstream analyses in the manuscript, including clustering, annotation, trajectory analyses, and synchronicity quantification.

Relationship to raw dataRaw sequencing data and primary submission files are available through the Gene Expression Omnibus repository under accession [GSE305468].

Reproducible analysis codeThe analysis pipeline corresponding to this dataset is archived as Zenodo software record https://doi.org/10.5281/zenodo.18481808 and is also available on GitHub at https://github.com/lenatr99/scRNA_dicty.

NotesThese .h5ad files represent processed and filtered data intended for analysis and figure reproduction. For full raw data and submission metadata, please use the Gene Expression Omnibus accession listed above.
DOI: 10.15468/dl.ftk23r
title: Occurrence Download

description: A dataset containing 2202998 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Abutilon fruticosum, Acalypha lindheimeri, Achillea millefolium, Agropyron cristatum, Allium ampeloprasum, Allium canadense, Allium drummondii, Allium textile, Alyssum desertorum, Ambrosia psilostachya, Amorpha canescens, Amphiachyris dracunculoides, Andropogon gerardi, Andropogon hallii, Anemone canadensis, Anemone cylindrica, Antennaria parvifolia, Antennaria neglecta, Apocynum cannabinum, Argemone albiflora, Argythamnia humilis, Aristida purpurea, Aristida longiseta, Artemisia cana, Artemisia dracunculus, Artemisia frigida, Artemisia ludoviciana, Artemisia tridentata, Asclepias, Asclepias arenaria, Asclepias asperula, Asclepias latifolia, Asclepias ovalifolia, Asclepias pumila, Asclepias syriaca, Asclepias viridiflora, Asclepias viridis, Asparagus officinalis, Aster ericoides, Aster oblongifolius, Astragalus crassicarpus, Astragalus gilviflorus, Astragalus gracilis, Astragalus laxmannii, Astragalus lotiflorus, Astragalus missouriensis, Astragalus mollissimus, Astragalus nuttallianus, Avena fatua, Baptisia australis, Baptisia bracteata, Bifora americana, Bothriochloa bladhii, Bothriochloa laguroides, Bouteloua curtipendula, Bouteloua dactyloides, Bouteloua gracilis, Bouteloua hirsuta, Bouteloua rigidiseta, Bromus arvensis)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)"
 ]
}

 The dataset includes 2202998 records from 4201 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011475-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wzh2va
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014686-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25573/serc.25148561
title: Dataset: Carbon Stock Assessment in the Kakum and Amanzule Estuary Mangrove Forests, Ghana

description: This dataset is an output of a masters research to evaluate the impact of environmental degradation on the ecosystems. Above- and below-ground carbon pools in two forests- Kakum and Amanzule- were, therefore, assessed. The Kakum estuary mangrove forest is located in the Cape Coast Metropolis in the Central Region of Ghana (5° 05´ 01.4ʺ N and 5° 03´ 56.3ʺ N and longitudes 1° 18´ 48.3ʺ W and 1° 19´ 19.9ʺ W). The Amanzule wetland is found in the Ellembelle District of the Western Region of Ghana (4° 46' 31 ″N and 4° 53' 46 ″ N; and 2° 00‘ 19 ″ W and 2° 05‘ 39 ″ W. Data on tree height, tree diameter, and soil were collected to estimate carbon density. Additional soil samples were collected to measure soil pH and salinity. Whereas the Kakum forest comprises mainly dwarf mangrove trees, the Amanzule forest has a mosaic of primary and secondary forest patches.
DOI: 10.25573/serc.25148561.v1
title: Dataset: Carbon Stock Assessment in the Kakum and Amanzule Estuary Mangrove Forests, Ghana

description: This dataset is an output of a masters research to evaluate the impact of environmental degradation on the ecosystems. Above- and below-ground carbon pools in two forests- Kakum and Amanzule- were, therefore, assessed. The Kakum estuary mangrove forest is located in the Cape Coast Metropolis in the Central Region of Ghana (5° 05´ 01.4ʺ N and 5° 03´ 56.3ʺ N and longitudes 1° 18´ 48.3ʺ W and 1° 19´ 19.9ʺ W). The Amanzule wetland is found in the Ellembelle District of the Western Region of Ghana (4° 46' 31 ″N and 4° 53' 46 ″ N; and 2° 00‘ 19 ″ W and 2° 05‘ 39 ″ W. Data on tree height, tree diameter, and soil were collected to estimate carbon density. Additional soil samples were collected to measure soil pH and salinity. Whereas the Kakum forest comprises mainly dwarf mangrove trees, the Amanzule forest has a mosaic of primary and secondary forest patches.
DOI: 10.15468/dl.yxw0ep
title: Occurrence Download

description: A dataset containing 1653617558 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 1653617558 records from 18884 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009237-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/vsx-erm-cvc
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/171-m9m-ea8
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lye-x8m-n8g
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n8l-44q-cz5
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ptl-t9s-t6m
title: Quadrivisio Stebbing, 1907

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tvx-pfl-pev
title: Quadrivisio Stebbing, 1907

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bw7-wpf-dvk
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j2g-l58-mqf
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4rv-8kc-c2q
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hfs-nas-82j
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jne-sq2-gwk
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f7j-nb0-y56
title: Quadrivisio Stebbing, 1907

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q1d-y0w-j1e
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2jh-2z2-g10
title: Malacostraca

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g71-45g-ftn
title: Candacia discaudata Scott A., 1909

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fty-667-e3y
title: Candacia discaudata Scott A., 1909

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0mv-aza-qb2
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wzm-h41-trt
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5kt-crm-nrz
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/htl-ylc-rmm
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n86-s6y-vp3
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7gl-dwg-zk6
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cq2-bj9-16c
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.