cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21920934
title: Data

description: File 1: RQ1-privacy-related-cwe This file contains all the CWE entries in research concept and software development views. The privacy-related CWE entries are labelled with 1 in the "privacy-related" column. <br> File 2: RQ1-privacy-related-cve This file contains all the CVE entries. The privacy-related CVE entries are labelled with 1 in the "privacy-related" column. <br> File 3: RQ2-classification-to-privacy-threats This file contains the CWE/CVE to privacy threats classification results between two coders. There are 5 sheets in the file. Sheet 1: Label - contains a mapping list (number-privacy threats) Sheet 2: cwe-classification - contains the CWE to privacy threats classification results of both coders. Sheet 3: cve-classification - contains the CVE to privacy threats classification results of both coders. Sheet 4: cwe-classification-final - contains the final result of CWE to privacy threats classification after disagreement resolution. Sheet 5: cve-classification-final - contains the final result of CWE to privacy threats classification after disagreement resolution. <br> File 4: RQ2-explanatory-study-papers This file contains a list of research papers with their associated privacy threats found in the explanatory study. <br> File 5: cve-to-cwe-to-threats.xlsx This file contains the mapping from CVE records to their associated CWE records and privacy threats. <br> File 6: cve-coder1 - the CVE to privacy threats classification result of coder 1 File 7: cve-coder2 - the CVE to privacy threats classification result of coder 2 File 8: cwe-coder1 - the CWE to privacy threats classification result of coder 1 File 9: cwe-coder2 - the CWE to privacy threats classification result of coder 2 <br> File 13: summary-papers-with-venues This file includes a full list of the selected SE publication venues with the total number of retrieved papers, included papers and threats found in a particular venue. <br> File 14: rights This file lists all the individual rights we extracted from the selected data protection regulations/privacy acts. Each right is associated with the description and relevant data protection regulations/privacy acts in which the right is mentioned. <br> File 15: papers-by-threats-categories This file summarised the number of papers that addresses each threat category.
DOI: 10.6084/m9.figshare.21920934.v1
title: Data

description: File 1: RQ1-privacy-related-cwe This file contains all the CWE entries in research concept and software development views. The privacy-related CWE entries are labelled with 1 in the "privacy-related" column. <br> File 2: RQ1-privacy-related-cve This file contains all the CVE entries. The privacy-related CVE entries are labelled with 1 in the "privacy-related" column. <br> File 3: RQ2-classification-to-privacy-threats This file contains the CWE/CVE to privacy threats classification results between two coders. There are 5 sheets in the file. Sheet 1: Label - contains a mapping list (number-privacy threats) Sheet 2: cwe-classification - contains the CWE to privacy threats classification results of both coders. Sheet 3: cve-classification - contains the CVE to privacy threats classification results of both coders. Sheet 4: cwe-classification-final - contains the final result of CWE to privacy threats classification after disagreement resolution. Sheet 5: cve-classification-final - contains the final result of CWE to privacy threats classification after disagreement resolution. <br> File 4: RQ2-explanatory-study-papers This file contains a list of research papers with their associated privacy threats found in the explanatory study. <br> File 5: cve-to-cwe-to-threats.xlsx This file contains the mapping from CVE records to their associated CWE records and privacy threats. <br> File 6: cve-coder1 - the CVE to privacy threats classification result of coder 1 File 7: cve-coder2 - the CVE to privacy threats classification result of coder 2 File 8: cwe-coder1 - the CWE to privacy threats classification result of coder 1 File 9: cwe-coder2 - the CWE to privacy threats classification result of coder 2 <br> File 13: summary-papers-with-venues This file includes a full list of the selected SE publication venues with the total number of retrieved papers, included papers and threats found in a particular venue. <br> File 14: rights This file lists all the individual rights we extracted from the selected data protection regulations/privacy acts. Each right is associated with the description and relevant data protection regulations/privacy acts in which the right is mentioned. <br> File 15: papers-by-threats-categories This file summarised the number of papers that addresses each threat category.
DOI: 10.5281/zenodo.7519061
title: Data for Typhoon Modelling with Observed Drag Reduction over Land as well as in-situ Observations

description: No description provided.
DOI: 10.6084/m9.figshare.20348094.v1
title: Untitled Item

description: The Data of the Risk Pain and Injury Questionnaire and lous of control
DOI: 10.6084/m9.figshare.20348094.v2
title: RPIQ

description: The Data of the Risk Pain and Injury Questionnaire and lous of control
DOI: 10.25442/hku.21792224
title: Supporting data for "Minimally-Invasive Treatment for Temporomandibular Disorders: Early Arthrocentesis and Extracorporeal Shockwave Therapy"

description: Early arthrocentesis for TMJ arthralgia: This superiority trial aimed to investigate the clinical outcomes of arthrocentesis as an early treatment, versus occlusal splint only, in the management of TMJ arthralgia. Ninety-five adult patients presented with TMJ arthralgia were recruited into the study and randomized into two groups: Group 1 received arthrocentesis as an early treatment and occlusal splint, whereas Group 2 received occlusal splint only. Seventy-four patients completed the 1-year follow up schedule and were included into the final analysis. In Group 1, pain intensity significantly decreased at 6 weeks and all subsequent time points compared to Group 2. For MO, significant improvement was observed in both groups during the course of treatment, yet a statistical significance was not seen between the two treatment groups. It was concluded that early arthrocentesis supported by occlusal splint is superior to occlusal splint alone in the treatment of TMJ arthralgia and could be discussed as an option for first-line treatment with patients allied to an occlusal splint. ESWT for myogenous TMD: a pilot study to investigate the feasibility and clinical outcomes of extracorporeal shockwave therapy (ESWT) in the treatment of TMD of myogenous origin (M-TMD). Forty-one adult patients presented with M-TMD were recruited into the study and randomized into two groups: Group 1 received ESWT treatment, whereas Group 2 received placebo treatment. Twenty-six patients completed 1-year follow up and were included into the final analysis. In both groups, reduction in pain and increase in MO were seen at post-treatment 1 year. Although more reduction in pain and increase in all MO in was seen Group 1, statistical significance was not detected. Yet this prospective pilot study provided preliminary evidence that ESWT is safe and potentially beneficial in the treatment of M-TMD.
DOI: 10.25442/hku.21792224.v1
title: Supporting data for "Minimally-Invasive Treatment for Temporomandibular Disorders: Early Arthrocentesis and Extracorporeal Shockwave Therapy"

description: Early arthrocentesis for TMJ arthralgia: This superiority trial aimed to investigate the clinical outcomes of arthrocentesis as an early treatment, versus occlusal splint only, in the management of TMJ arthralgia. Ninety-five adult patients presented with TMJ arthralgia were recruited into the study and randomized into two groups: Group 1 received arthrocentesis as an early treatment and occlusal splint, whereas Group 2 received occlusal splint only. Seventy-four patients completed the 1-year follow up schedule and were included into the final analysis. In Group 1, pain intensity significantly decreased at 6 weeks and all subsequent time points compared to Group 2. For MO, significant improvement was observed in both groups during the course of treatment, yet a statistical significance was not seen between the two treatment groups. It was concluded that early arthrocentesis supported by occlusal splint is superior to occlusal splint alone in the treatment of TMJ arthralgia and could be discussed as an option for first-line treatment with patients allied to an occlusal splint. ESWT for myogenous TMD: a pilot study to investigate the feasibility and clinical outcomes of extracorporeal shockwave therapy (ESWT) in the treatment of TMD of myogenous origin (M-TMD). Forty-one adult patients presented with M-TMD were recruited into the study and randomized into two groups: Group 1 received ESWT treatment, whereas Group 2 received placebo treatment. Twenty-six patients completed 1-year follow up and were included into the final analysis. In both groups, reduction in pain and increase in MO were seen at post-treatment 1 year. Although more reduction in pain and increase in all MO in was seen Group 1, statistical significance was not detected. Yet this prospective pilot study provided preliminary evidence that ESWT is safe and potentially beneficial in the treatment of M-TMD.
DOI: 10.6084/m9.figshare.20348094.v3
title: RPIQ

description: The Data of the Risk Pain and Injury Questionnaire and lous of control
DOI: 10.25442/hku.21802093
title: Supporting data for “Transcriptomic Features of SLE Patients in Flare and Changes during Acute In-Hospital Treatment”

description: Systemic lupus erythematosus (SLE) is a heterogeneous autoimmune disease characterized by diverse clinical symptoms. Most patients suffer from varied disease relapse-remission cycles under current treatment regimens, which often leads to acute in-hospital treatment for disease flare. Although the distinct transcriptomic features of SLE have been widely described in comparison to healthy people, how these features could respond to the intensive treatment during disease flare is less discussed. To better understand the dynamic transcriptomic features during SLE flare and treatment, transcriptome profiles of 65 SLE patients were investigated, before (SLE1) and after (SLE2) patients` acute in-hospital treatment in pairs, via RNA-sequencing profiling of peripheral blood mononuclear cells (PBMCs). Together with 15 healthy donors as controls (HC), SLE-dysregulated transcriptomic features and the corresponding treatment effects on them were identified. Generally, differentially expressed genes (DEGs) and differential alternative splicing genes (DSGs) were identified among HC, SLE1, and SLE2. The functional aspects of these genes were described, and key signatures were identified. Together with SLE genetic findings, the interactions between SLE transcriptomic and genetic features were explored and discussed. <br> <br> <br>
DOI: 10.25442/hku.21802093.v1
title: Supporting data for “Transcriptomic Features of SLE Patients in Flare and Changes during Acute In-Hospital Treatment”

description: Systemic lupus erythematosus (SLE) is a heterogeneous autoimmune disease characterized by diverse clinical symptoms. Most patients suffer from varied disease relapse-remission cycles under current treatment regimens, which often leads to acute in-hospital treatment for disease flare. Although the distinct transcriptomic features of SLE have been widely described in comparison to healthy people, how these features could respond to the intensive treatment during disease flare is less discussed. To better understand the dynamic transcriptomic features during SLE flare and treatment, transcriptome profiles of 65 SLE patients were investigated, before (SLE1) and after (SLE2) patients` acute in-hospital treatment in pairs, via RNA-sequencing profiling of peripheral blood mononuclear cells (PBMCs). Together with 15 healthy donors as controls (HC), SLE-dysregulated transcriptomic features and the corresponding treatment effects on them were identified. Generally, differentially expressed genes (DEGs) and differential alternative splicing genes (DSGs) were identified among HC, SLE1, and SLE2. The functional aspects of these genes were described, and key signatures were identified. Together with SLE genetic findings, the interactions between SLE transcriptomic and genetic features were explored and discussed. <br> <br> <br>
DOI: 10.25442/hku.21802437
title: Supporting data for "Investigation of broad-spectrum antiviral targets through epigenetic modulations"

description: Zika virus (ZIKV) is a mosquito-borne flavivirus that caused unprecedented large-scale epidemics of severe neurological complications. Currently, there has been no clinically-approved vaccine or antivirals for the prevention or treatment of ZIKV, suggesting the need of exploring novel strategies that may potentially combat these emerging viral pathogens. Therefore, our study reveal new targets that may add to our current repertoire of antiviral strategies.
DOI: 10.25442/hku.21802437.v1
title: Supporting data for "Investigation of broad-spectrum antiviral targets through epigenetic modulations"

description: Zika virus (ZIKV) is a mosquito-borne flavivirus that caused unprecedented large-scale epidemics of severe neurological complications. Currently, there has been no clinically-approved vaccine or antivirals for the prevention or treatment of ZIKV, suggesting the need of exploring novel strategies that may potentially combat these emerging viral pathogens. Therefore, our study reveal new targets that may add to our current repertoire of antiviral strategies.
DOI: 10.25442/hku.21812721
title: Supporting data for “Understanding why the bone marrow gives rise to both CNS and PNS glia：Implications for remyelination therapy”

description: Human bone marrow is a rich reservoir from which stem cells can be harvested and used for cell-based regenerative therapies. A subpopulation of human bone marrow stromal cells (hBMSCs) is thought to be derived from the neural crest (NC). NC cells can directly give rise to Schwann cells (SCs). Oligodendrocytes are myelin-forming cells within the central nervous system (CNS) and are derived from oligodendrocyte precursor cells (OPCs) arising from the ventral pMN zone of the neural tube. In prior studies we generated functional Schwann cells from hBMSCs via a neurosphere intermediary generated in low-adherent conditions with EGF/bFGF supplementation. In this study, we characterized hBMSCs and hBMSC-derived neurospheres against reference atlases of human embryonic and adult bone marrow to understand neural progenitor identity as well as developmental origin. We then proceeded to apply a ventralization protocol to putative NC progenitors within hBMSCs consisting of dual Smad inhibition, sonic hedgehog (SHH) signaling enhancement, and glial induction phases to effect a PNS to CNS progenitor transition. As a proof-of-concept, we used single-cell RNA sequencing (scRNA-seq) to characterize the transcriptional landscape of cell populations at single-cell resolution during this ventralization process, to analyze both cellular identity as well as differentiation trajectories. The findings of this study were: 1) the confirmation of NC derivatives residing within human embryonic and adult long bone marrow, 2) enrichment of NC progenitors within bone marrow via neurosphere culture conditions that demonstrated multipotency and stereotypic migration upon transplantation into the chick neural tube, and 3) OPC-like cell generated from NC progenitors harvested from the embryonic rat DRG and human bone marrow, with demonstrable change from a PNS to CNS phenotype. A unique advantage of our approach in generating myelinating glia from the CNS and PNS is safely in the avoidance of genetic manipulation. Therefore, adult human bone marrow may be used as a safe and accessible source to generate Schwann cells and oligodendrocyte. Derived myelinating glia can be autologously transplanted into patients suffering from traumatic and demyelinating diseases, as well as utilized for disease modelling.
DOI: 10.25442/hku.21812721.v1
title: Supporting data for “Understanding why the bone marrow gives rise to both CNS and PNS glia：Implications for remyelination therapy”

description: Human bone marrow is a rich reservoir from which stem cells can be harvested and used for cell-based regenerative therapies. A subpopulation of human bone marrow stromal cells (hBMSCs) is thought to be derived from the neural crest (NC). NC cells can directly give rise to Schwann cells (SCs). Oligodendrocytes are myelin-forming cells within the central nervous system (CNS) and are derived from oligodendrocyte precursor cells (OPCs) arising from the ventral pMN zone of the neural tube. In prior studies we generated functional Schwann cells from hBMSCs via a neurosphere intermediary generated in low-adherent conditions with EGF/bFGF supplementation. In this study, we characterized hBMSCs and hBMSC-derived neurospheres against reference atlases of human embryonic and adult bone marrow to understand neural progenitor identity as well as developmental origin. We then proceeded to apply a ventralization protocol to putative NC progenitors within hBMSCs consisting of dual Smad inhibition, sonic hedgehog (SHH) signaling enhancement, and glial induction phases to effect a PNS to CNS progenitor transition. As a proof-of-concept, we used single-cell RNA sequencing (scRNA-seq) to characterize the transcriptional landscape of cell populations at single-cell resolution during this ventralization process, to analyze both cellular identity as well as differentiation trajectories. The findings of this study were: 1) the confirmation of NC derivatives residing within human embryonic and adult long bone marrow, 2) enrichment of NC progenitors within bone marrow via neurosphere culture conditions that demonstrated multipotency and stereotypic migration upon transplantation into the chick neural tube, and 3) OPC-like cell generated from NC progenitors harvested from the embryonic rat DRG and human bone marrow, with demonstrable change from a PNS to CNS phenotype. A unique advantage of our approach in generating myelinating glia from the CNS and PNS is safely in the avoidance of genetic manipulation. Therefore, adult human bone marrow may be used as a safe and accessible source to generate Schwann cells and oligodendrocyte. Derived myelinating glia can be autologously transplanted into patients suffering from traumatic and demyelinating diseases, as well as utilized for disease modelling.
DOI: 10.34740/kaggle/dsv/4870719
title: 🇺🇦 Ukraine Conflict Twitter Dataset
DOI: 10.6084/m9.figshare.20347929
title: RPIQ

description: The Data of the Risk Pain and Injury Questionnaire and lous of control
DOI: 10.5281/zenodo.7549573
title: Occurrence download of orangutans from GBIF via dismo

description: This dataset was created for a course on Environmental Data Analysis (ENVS2002) at The University of Hong Kong. The Occurrence records were downloaded from GBIF through the R package dismo (Hijmans 2022). Hijmans, R. J., Phillips, S., Leathwick, J., Elith, J.(2022). Package ‘dismo’. 1-68.
DOI: 10.5281/zenodo.7549572
title: Occurrence download of orangutans from GBIF via dismo

description: This dataset was created for a course on Environmental Data Analysis (ENVS2002) at The University of Hong Kong. The Occurrence records were downloaded from GBIF through the R package dismo (Hijmans 2022). Hijmans, R. J., Phillips, S., Leathwick, J., Elith, J.(2022). Package ‘dismo’. 1-68.
DOI: 10.5281/zenodo.7545878
title: MUSES Fractional Vegetation Coverage (FVC) 8-Day Global 250m SIN Grid in 2007 (001–177)

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global FVC product at 250m spatial resolution and 8-day temporal resolution. The MUSES FVC product is provided on a Sinusoidal grid and spans from 2000 to 2019 (continuously updated). It was generated from the MUSES LAI product at 250m resolution and other ancillary information using the complement to unity of the transmittance of light through the entire canopy in the nadir viewing direction (Xiao <em>et al</em>., 2016). The MUSES FVC values are physically consistent with the corresponding MUSES LAI values. The MUSES FVC product is spatially complete and temporally continuous. This dataset is the MUSES FVC product in 2007 (001–177). <em>Please <strong><em>click</em> here</strong> to download the MUSES FVC product <strong>in 2006 (185–361)</strong></em>, and <em><strong>click here</strong> to download the MUSES FVC product <strong>in 2007 (185–361</strong></em><em><strong>)</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2007 (001–177) Spatial Resolution: 250m Temporal Resolution: 8 days Projection: Sinusoidal Data Format: HDF Scale: 0.01 Valid Range: 0 – 100 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et a</em>l. (2016). Estimating the Fractional Vegetation Cover from GLASS Leaf Area Index Product. <em>Remote Sensing</em>, 8, 337. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).
DOI: 10.5281/zenodo.7545877
title: MUSES Fractional Vegetation Coverage (FVC) 8-Day Global 250m SIN Grid in 2007 (001–177)

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global FVC product at 250m spatial resolution and 8-day temporal resolution. The MUSES FVC product is provided on a Sinusoidal grid and spans from 2000 to 2019 (continuously updated). It was generated from the MUSES LAI product at 250m resolution and other ancillary information using the complement to unity of the transmittance of light through the entire canopy in the nadir viewing direction (Xiao <em>et al</em>., 2016). The MUSES FVC values are physically consistent with the corresponding MUSES LAI values. The MUSES FVC product is spatially complete and temporally continuous. This dataset is the MUSES FVC product in 2007 (001–177). <em>Please <strong><em>click</em> here</strong> to download the MUSES FVC product <strong>in 2006 (185–361)</strong></em>, and <em><strong>click here</strong> to download the MUSES FVC product <strong>in 2007 (185–361</strong></em><em><strong>)</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2007 (001–177) Spatial Resolution: 250m Temporal Resolution: 8 days Projection: Sinusoidal Data Format: HDF Scale: 0.01 Valid Range: 0 – 100 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et a</em>l. (2016). Estimating the Fractional Vegetation Cover from GLASS Leaf Area Index Product. <em>Remote Sensing</em>, 8, 337. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).
DOI: 10.13018/bmr30167
title: Reverse topology of the globular isoform of PnID
DOI: 10.13018/bmr30168
title: Initial Topology of the globular isomer of PnID
DOI: 10.6084/m9.figshare.20348094.v4
title: RPIQ

description: The Data of the Risk Pain and Injury Questionnaire and lous of control