cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/mn7x93562v.1
title: Measurement of a corpus of business process models designed in existing business process modelling approaches

description: This document contains the measurements for the redundancy, complexity and the minimal number of change operations for 12 business processes modelled in several business processes modelling approaches. The BPPLE approach is not included.
DOI: 10.7284/131610
title: INS (Inertial Navigation System) data collected during research cruise SR1803 using a Kongsberg Seapath 330+ instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131773
title: INS (Inertial Navigation System) data collected during research cruise SR1803 using a Kongsberg Seapath 330+ instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131801
title: INS (Inertial Navigation System) data collected during research cruise SR1803 using a iXSea Hydrins instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131802
title: INS (Inertial Navigation System) data collected during research cruise SR1803 using a iXSea Hydrins instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131602
title: Meteorological Station data collected during research cruise SR1803 using a SIO MET-System instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131613
title: Splitbeam Echosounder data collected during research cruise SR1803 using a Kongsberg EK80 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131742
title: Winch data collected during research cruise SR1803 using a Markey DETW-9-11 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131743
title: Winch data collected during research cruise SR1803 using a Markey CAST-6-125 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131744
title: Winch data collected during research cruise SR1803 using a Markey CAST-6-125 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131621
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SR1804 using a Hawaii UHDAS instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7204148
title: SIMION simulations

description: SIMION simulation for co-axial velocity map imaging spectrometer
DOI: 10.7284/131618
title: GNSS (Global Navigation Satellite System) data collected during research cruise SR1804 using a Trimble BD982 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131617
title: Gyrocompass data collected during research cruise SR1804 using a Sperry NAVIGAT X MK 1 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131622
title: INS (Inertial Navigation System) data collected during research cruise SR1804 using a Kongsberg Seapath 330+ instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131775
title: INS (Inertial Navigation System) data collected during research cruise SR1804 using a Kongsberg Seapath 330+ instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131803
title: INS (Inertial Navigation System) data collected during research cruise SR1804 using a iXSea Hydrins instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131804
title: INS (Inertial Navigation System) data collected during research cruise SR1804 using a iXSea Hydrins instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131614
title: Meteorological Station data collected during research cruise SR1804 using a SIO MET-System instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131619
title: Multibeam Echosounder data collected during research cruise SR1804 using a Kongsberg EM712 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131620
title: Multibeam Echosounder data collected during research cruise SR1804 using a Kongsberg EM122 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131623
title: Multibeam Echosounder data collected during research cruise SR1804 using a Kongsberg EM712 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131624
title: Multibeam Echosounder data collected during research cruise SR1804 using a Kongsberg EM122 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131625
title: Splitbeam Echosounder data collected during research cruise SR1804 using a Kongsberg EK80 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131745
title: Winch data collected during research cruise SR1804 using a Markey DETW-9-11 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131746
title: Winch data collected during research cruise SR1804 using a Markey CAST-6-125 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131747
title: Winch data collected during research cruise SR1804 using a Markey CAST-6-125 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131634
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SR1805 using a Hawaii UHDAS instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7204022
title: Additional file 1: of Deregulation of neuronal miRNAs induced by amyloid-β or TAU pathology

description: Table S1. Overview of miRNA FISH probes. Table S2. All significant miRNAs for age/genotype/age*genotype for APPtg and TAUtg combined, APPtg and TAUtg. Table S3. Predicted targets by TargetScan Mouse (v.7.1) for the six identifief miRNAs. Table S4. Predicted targets of miR-10a-5p, miR-142a-5p, miR-146a-5p, miR-155-5p, miR-211-5p and miR-455-5p that play a role in the production of amyloid-β or TAU (de)phosphorylation. (XLSX 65 kb)
DOI: 10.6084/m9.figshare.7204022.v1
title: Additional file 1: of Deregulation of neuronal miRNAs induced by amyloid-β or TAU pathology

description: Table S1. Overview of miRNA FISH probes. Table S2. All significant miRNAs for age/genotype/age*genotype for APPtg and TAUtg combined, APPtg and TAUtg. Table S3. Predicted targets by TargetScan Mouse (v.7.1) for the six identifief miRNAs. Table S4. Predicted targets of miR-10a-5p, miR-142a-5p, miR-146a-5p, miR-155-5p, miR-211-5p and miR-455-5p that play a role in the production of amyloid-β or TAU (de)phosphorylation. (XLSX 65 kb)
DOI: 10.7284/131629
title: Expendable Probe data collected during research cruise SR1805 using a Turo Quoll instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131631
title: GNSS (Global Navigation Satellite System) data collected during research cruise SR1805 using a Trimble BD982 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/133157
title: Gravimeter data collected during research cruise SR1805 using a Bell BGM-3 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131635
title: INS (Inertial Navigation System) data collected during research cruise SR1805 using a Kongsberg Seapath 330+ instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131777
title: INS (Inertial Navigation System) data collected during research cruise SR1805 using a Kongsberg Seapath 330+ instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131805
title: INS (Inertial Navigation System) data collected during research cruise SR1805 using a iXSea Hydrins instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131806
title: INS (Inertial Navigation System) data collected during research cruise SR1805 using a iXSea Hydrins instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131626
title: Meteorological Station data collected during research cruise SR1805 using a SIO MET-System instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131632
title: Multibeam Echosounder data collected during research cruise SR1805 using a Kongsberg EM712 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7203971
title: Additional file 1: of Factors driving effective population size and pan-genome evolution in bacteria

description: Table S1.Â Data summary. (XLSX 84 kb)
DOI: 10.7284/131633
title: Multibeam Echosounder data collected during research cruise SR1805 using a Kongsberg EM122 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131636
title: Multibeam Echosounder data collected during research cruise SR1805 using a Kongsberg EM712 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131628
title: Singlebeam Echosounder data collected during research cruise SR1805 using a Knudsen 3260 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7203947
title: Additional file 18: of Factors driving effective population size and pan-genome evolution in bacteria

description: Table S4.Â List of analyzed genomes for each species. (XLS 317 kb)
DOI: 10.6084/m9.figshare.7203947.v1
title: Additional file 18: of Factors driving effective population size and pan-genome evolution in bacteria

description: Table S4.Â List of analyzed genomes for each species. (XLS 317 kb)
DOI: 10.7284/131638
title: Splitbeam Echosounder data collected during research cruise SR1805 using a Kongsberg EK80 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131748
title: Winch data collected during research cruise SR1805 using a Markey DETW-9-11 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7203938
title: Additional file 6 of PQ, a new program for phylogeny reconstruction

description: Scripts. The archive Scripts.tar.gz contains Bash and Python 2.7 scripts used for obtaininh results of the paper and the file ReadMe.txt with their description. (TAR 19 kb)
DOI: 10.6084/m9.figshare.7203938.v1
title: Additional file 6 of PQ, a new program for phylogeny reconstruction

description: Scripts. The archive Scripts.tar.gz contains Bash and Python 2.7 scripts used for obtaininh results of the paper and the file ReadMe.txt with their description. (TAR 19 kb)
DOI: 10.7284/131749
title: Winch data collected during research cruise SR1805 using a Markey CAST-6-125 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131750
title: Winch data collected during research cruise SR1805 using a Markey CAST-6-125 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131646
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SR1806 using a Hawaii UHDAS instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7203920
title: Additional file 5 of PQ, a new program for phylogeny reconstruction

description: Data for testing long branch attraction artifact. The archive LBA.tar.gz contains two folders called Test1 and Test2. Each folder contains two subfolders called Alignments and Trees. Their content are similar to the content of the corresponding files in Additional fileÂ 2. Alignments and trees in the folder Test1 each includes sequences from 18 fungal species: five Basidiomycota, 11 Eurotiomycetes, one from Sordariomucetes and one from Saccharomycetes. Alignments and trees in the folder Test2 each includes sequences from 19 fungal species: five Basidiomycota, 12 Sordariomycetes, one from Eurotiomycetes and one from Saccharomycetes. (TAR 1700 kb)
DOI: 10.6084/m9.figshare.7203920.v1
title: Additional file 5 of PQ, a new program for phylogeny reconstruction

description: Data for testing long branch attraction artifact. The archive LBA.tar.gz contains two folders called Test1 and Test2. Each folder contains two subfolders called Alignments and Trees. Their content are similar to the content of the corresponding files in Additional fileÂ 2. Alignments and trees in the folder Test1 each includes sequences from 18 fungal species: five Basidiomycota, 11 Eurotiomycetes, one from Sordariomucetes and one from Saccharomycetes. Alignments and trees in the folder Test2 each includes sequences from 19 fungal species: five Basidiomycota, 12 Sordariomycetes, one from Eurotiomycetes and one from Saccharomycetes. (TAR 1700 kb)
DOI: 10.7284/131641
title: Expendable Probe data collected during research cruise SR1806 using a Turo Quoll instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7203911
title: Additional file 4 of PQ, a new program for phylogeny reconstruction

description: Simulated data. The archive Simulated-data.tar.gz contains two folders called Alignments and Trees. Folder Alignments contains 500 simulated 15-sequence nucleotide alignments in fasta format. Folder Trees contains six subfolders, PQ, MP, ML, ME, QP and Reference with trees in Newick format reconstructed from the alignments with five methods and with reference trees used for simulations. Names of the tree files correspond to names of alignment files. (TAR 1860 kb)
DOI: 10.6084/m9.figshare.7203911.v1
title: Additional file 4 of PQ, a new program for phylogeny reconstruction

description: Simulated data. The archive Simulated-data.tar.gz contains two folders called Alignments and Trees. Folder Alignments contains 500 simulated 15-sequence nucleotide alignments in fasta format. Folder Trees contains six subfolders, PQ, MP, ML, ME, QP and Reference with trees in Newick format reconstructed from the alignments with five methods and with reference trees used for simulations. Names of the tree files correspond to names of alignment files. (TAR 1860 kb)
DOI: 10.7284/131643
title: GNSS (Global Navigation Satellite System) data collected during research cruise SR1806 using a Trimble BD982 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/133158
title: Gravimeter data collected during research cruise SR1806 using a Bell BGM-3 instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7203899
title: Additional file 3 of PQ, a new program for phylogeny reconstruction

description: Nucleic acid data. The archive Nucleic-data.tar.gz contains two folders called Fungi and Proteobacteria. Each folder contains two subfolders called Alignments and Trees. Subfolder Alignments contains the alignment of small ribosomal subunit RNA of corresponding organisms and 100 15-sequence subalignments in fasta format. Names of the sequences in alignments are Uniprot organism mnemonics. Subfolder Trees contains five subfolders, PQ, MP, ML, ME, and QP with trees in Newick format reconstructed from the alignments with five methods. Names of the tree files correspond to names of alignment files. Also the subfolder Trees contains the species trees used as reference, in Newick format and as PNG images. On the fungal tree image, branches corresponding to phyla, subphyla, and classes of Pezizomycotina are labeled. On the proteobacterial tree image, branches corresponding to classes are labeled. (TAR 456 kb)
DOI: 10.6084/m9.figshare.7203899.v1
title: Additional file 3 of PQ, a new program for phylogeny reconstruction

description: Nucleic acid data. The archive Nucleic-data.tar.gz contains two folders called Fungi and Proteobacteria. Each folder contains two subfolders called Alignments and Trees. Subfolder Alignments contains the alignment of small ribosomal subunit RNA of corresponding organisms and 100 15-sequence subalignments in fasta format. Names of the sequences in alignments are Uniprot organism mnemonics. Subfolder Trees contains five subfolders, PQ, MP, ML, ME, and QP with trees in Newick format reconstructed from the alignments with five methods. Names of the tree files correspond to names of alignment files. Also the subfolder Trees contains the species trees used as reference, in Newick format and as PNG images. On the fungal tree image, branches corresponding to phyla, subphyla, and classes of Pezizomycotina are labeled. On the proteobacterial tree image, branches corresponding to classes are labeled. (TAR 456 kb)
DOI: 10.7284/131647
title: INS (Inertial Navigation System) data collected during research cruise SR1806 using a Kongsberg Seapath 330+ instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/131807
title: INS (Inertial Navigation System) data collected during research cruise SR1806 using a iXSea Hydrins instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7203887
title: Additional file 14: of Factors driving effective population size and pan-genome evolution in bacteria

description: Table S3. Principal component analysis statistics of the quantitative variables used in the study.Â (XLSX 13 kb)
DOI: 10.6084/m9.figshare.7203887.v1
title: Additional file 14: of Factors driving effective population size and pan-genome evolution in bacteria

description: Table S3. Principal component analysis statistics of the quantitative variables used in the study.Â (XLSX 13 kb)
DOI: 10.7284/131808
title: INS (Inertial Navigation System) data collected during research cruise SR1806 using a iXSea Hydrins instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7203875
title: Additional file 2 of PQ, a new program for phylogeny reconstruction

description: Protein data. The archive Protein-data.tar.gz contains nine folders that each hold data of one data set used in this work. Each folder contains two subfolders called Alignments and Trees. Subfolder Alignments contains sequence alignments in fasta format. Names of the files are Pfam identifiers with additional figures, for example, the file PF00012_3.fasta contains an alignment of the sequences of protein domains from the third orthologous group of Pfam family PF00012. Names of the sequences in alignments are Uniprot organism mnemonics. Subfolder Trees contains five subfolders, PQ, MP, ML, ME, and QP with trees in Newick format reconstructed from the alignments with five methods. Names of the tree files correspond to names of alignment files. The subfolder Trees of folders Metazoa-25, Fungi-45 and Proteobacteria-45 also contains the three species trees used as reference, in Newick format and as PNG images. On the metazoan tree image, all nontrivial branches are labeled with taxon names. On the fungal tree image, branches corresponding to phyla, subphyla, and classes of Pezizomycotina are labeled. On the proteobacterial tree image, branches corresponding to classes are labeled. (TAR 28,930 kb)
DOI: 10.7284/131778
title: Magnetometer data collected during research cruise SR1806 using a Marine Magnetics SeaSPY instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7203875.v1
title: Additional file 2 of PQ, a new program for phylogeny reconstruction

description: Protein data. The archive Protein-data.tar.gz contains nine folders that each hold data of one data set used in this work. Each folder contains two subfolders called Alignments and Trees. Subfolder Alignments contains sequence alignments in fasta format. Names of the files are Pfam identifiers with additional figures, for example, the file PF00012_3.fasta contains an alignment of the sequences of protein domains from the third orthologous group of Pfam family PF00012. Names of the sequences in alignments are Uniprot organism mnemonics. Subfolder Trees contains five subfolders, PQ, MP, ML, ME, and QP with trees in Newick format reconstructed from the alignments with five methods. Names of the tree files correspond to names of alignment files. The subfolder Trees of folders Metazoa-25, Fungi-45 and Proteobacteria-45 also contains the three species trees used as reference, in Newick format and as PNG images. On the metazoan tree image, all nontrivial branches are labeled with taxon names. On the fungal tree image, branches corresponding to phyla, subphyla, and classes of Pezizomycotina are labeled. On the proteobacterial tree image, branches corresponding to classes are labeled. (TAR 28,930 kb)
DOI: 10.6084/m9.figshare.7203863
title: Additional file 1 of PQ, a new program for phylogeny reconstruction

description: Organism sets. The MS-Excel file Organisms.xlsx contains lists of organisms from three species sets, with the Uniprot mnemonics that are used in Additional filesÂ 2 and 3. (XLSX 23 kb)
DOI: 10.7284/131639
title: Meteorological Station data collected during research cruise SR1806 using a SIO MET-System instrument system onboard the platform RV Sally Ride

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7203863.v1
title: Additional file 1 of PQ, a new program for phylogeny reconstruction

description: Organism sets. The MS-Excel file Organisms.xlsx contains lists of organisms from three species sets, with the Uniprot mnemonics that are used in Additional filesÂ 2 and 3. (XLSX 23 kb)