cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30423492
title: Additional file 3 of Characterization of a PRKCE::ETV6 fusion as a potential oncogenic driver in T-cell acute lymphoblastic leukemia

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30423492.v1
title: Additional file 3 of Characterization of a PRKCE::ETV6 fusion as a potential oncogenic driver in T-cell acute lymphoblastic leukemia

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30527757
title: Additional file 3 of Downregulation of PDIA4 inhibits proliferation and migration in human oral squamous cell carcinoma

description: Supplementary Material 3: Table S3 GSVA results between H-PDIA4 and L-PDIA4 groups.
DOI: 10.6084/m9.figshare.30527757.v1
title: Additional file 3 of Downregulation of PDIA4 inhibits proliferation and migration in human oral squamous cell carcinoma

description: Supplementary Material 3: Table S3 GSVA results between H-PDIA4 and L-PDIA4 groups.
DOI: 10.6084/m9.figshare.30527760
title: Additional file 4 of Downregulation of PDIA4 inhibits proliferation and migration in human oral squamous cell carcinoma

description: Supplementary Material 4: Table S4 The correlation between PDIA4 and drug sensitivity.
DOI: 10.6084/m9.figshare.30527760.v1
title: Additional file 4 of Downregulation of PDIA4 inhibits proliferation and migration in human oral squamous cell carcinoma

description: Supplementary Material 4: Table S4 The correlation between PDIA4 and drug sensitivity.
DOI: 10.6084/m9.figshare.30527777
title: Additional file 1 of Disabled people faced greater challenges accessing sexual and reproductive health services in the first year of the COVID-19 pandemic in Britain: evidence from the Natsal-COVID survey

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30527777.v1
title: Additional file 1 of Disabled people faced greater challenges accessing sexual and reproductive health services in the first year of the COVID-19 pandemic in Britain: evidence from the Natsal-COVID survey

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30527832
title: Additional file 1 of Proximal 4p deletion syndrome in a woman with intellectual disability: a case report and literature review

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30527832.v1
title: Additional file 1 of Proximal 4p deletion syndrome in a woman with intellectual disability: a case report and literature review

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30527834
title: Additional file 3 of Fragile X mental retardation 1 gene FMR1 promotes proliferation, migration, and invasion of gastric cancer cells via c-MYC

description: Additional file 3.
DOI: 10.6084/m9.figshare.30527834.v1
title: Additional file 3 of Fragile X mental retardation 1 gene FMR1 promotes proliferation, migration, and invasion of gastric cancer cells via c-MYC

description: Additional file 3.
DOI: 10.6084/m9.figshare.30527837
title: Additional file 4 of Fragile X mental retardation 1 gene FMR1 promotes proliferation, migration, and invasion of gastric cancer cells via c-MYC

description: Additional file 4.
DOI: 10.6084/m9.figshare.30527837.v1
title: Additional file 4 of Fragile X mental retardation 1 gene FMR1 promotes proliferation, migration, and invasion of gastric cancer cells via c-MYC

description: Additional file 4.
DOI: 10.6084/m9.figshare.30527843
title: Additional file 1 of Analyses of contiguous reference genomes of Amaranthus tuberculatus highlight the landscape of the sex-associated region and PEBP gene family diversity

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30527843.v1
title: Additional file 1 of Analyses of contiguous reference genomes of Amaranthus tuberculatus highlight the landscape of the sex-associated region and PEBP gene family diversity

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30527855
title: Additional file 1 of Sulfur starvation induces an Fe-replete response and attenuates virulence pathways in Pseudomonas aeruginosa PAO1

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30527855.v1
title: Additional file 1 of Sulfur starvation induces an Fe-replete response and attenuates virulence pathways in Pseudomonas aeruginosa PAO1

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30527858.v1
title: Additional file 2 of Sulfur starvation induces an Fe-replete response and attenuates virulence pathways in Pseudomonas aeruginosa PAO1

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30527864.v1
title: Additional file 3 of Sulfur starvation induces an Fe-replete response and attenuates virulence pathways in Pseudomonas aeruginosa PAO1

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30527873
title: Additional file 6 of Sulfur starvation induces an Fe-replete response and attenuates virulence pathways in Pseudomonas aeruginosa PAO1

description: Supplementary Material 6.
DOI: 10.6084/m9.figshare.30527873.v1
title: Additional file 6 of Sulfur starvation induces an Fe-replete response and attenuates virulence pathways in Pseudomonas aeruginosa PAO1

description: Supplementary Material 6.
DOI: 10.6084/m9.figshare.30527874
title: Additional file 1 of Causal pathways of plasma metabolites: unveiling metabolic associations in liver diseases

description: Supplementary Material 1
DOI: 10.15468/dl.889d84
title: Occurrence Download

description: A dataset containing 89313368 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 89313368 records from 14699 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014413-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zyno87
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001509-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26005438.v2
title: Data and R code for "Globally varied complementarity and selection effects in driving plant diversity effects on productivity"

description: Data and code files showed the analyses separately for each figure and table in "Globally varied complementarity and selection effects in driving plant diversity effects on productivity"<br>
DOI: 10.15468/dl.m2p3h7
title: Occurrence Download

description: A dataset containing 2186848766 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 2186848766 records from 48992 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013993-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/gvsmdj
title: Chaudiere_PhaseExploitationMode_Weishaupt_SansUnite_2024.tab
DOI: 10.57745/pnonvn
title: Chaudiere_PositionDeChargement_Weishaupt_Pourcentage_2024.tab
DOI: 10.57745/ge58pv
title: Chaudiere_ProductionChauffage_Weishaupt_Binaire_2024.tab
DOI: 10.57745/ly459n
title: Chaudiere_ProductionEauChaude_Weishaupt_Binaire_2024.tab
DOI: 10.57745/qljquc
title: Chaudiere_ConsigneTemperature_Weishaupt_DegreCelsius_2024.tab
DOI: 10.57745/bd23s3
title: Chaudiere_TemperatureDeDebit_Weishaupt_DegreCelsius_2024.tab
DOI: 10.57745/bi5dti
title: Chaudiere_TemperatureEauChaude_Weishaupt_DegreCelsius_2024.tab
DOI: 10.57745/4rron3
title: Chaudiere_TemperatureEchappement_Weishaupt_DegreCelsius_2024.tab
DOI: 10.57745/meg4eo
title: Chaudiere_TemperatureExterieureMoyenne_Weishaupt_DegreCelsius_2024.tab
DOI: 10.57745/xadcee
title: Chaudiere_TemperatureExterieure_Weishaupt_DegreCelsius_2024.tab
DOI: 10.57745/ivoi6h
title: Radiateurs_Chambre1Consigne_Moes_DegreCelsius_2024.tab
DOI: 10.57745/1eoie0
title: Radiateurs_Chambre1Temperature_Moes_DegreCelsius_2024.tab
DOI: 10.57745/vwxzjy
title: Radiateurs_Chambre1Position_Moes_Pourcentage_2024.tab
DOI: 10.57745/3wkckg
title: Radiateurs_Chambre2Consigne_Moes_DegreCelsius_2024.tab
DOI: 10.57745/sbw6aw
title: Radiateurs_Chambre2Position_Moes_Pourcentage_2024.tab
DOI: 10.57745/zgis57
title: Radiateurs_Chambre2Temperature_Moes_DegreCelsius_2024.tab
DOI: 10.57745/agujy4
title: Radiateurs_Chambre3Temperature_Moes_DegreCelsius_2024.tab
DOI: 10.57745/unozfg
title: Radiateurs_2emeEtageTemperature_Moes_DegreCelsius_2024.tab
DOI: 10.57745/wbaqq4
title: Radiateurs_SalonConsigne_Moes_DegreCelsius_2024.tab
DOI: 10.57745/nwivyk
title: Radiateurs_SalonTemperature_Moes_DegreCelsius_2024.tab
DOI: 10.57745/ubybhs
title: CompteursEnergie_RobotConsommation_Wallplug_Wh_2024.tab
DOI: 10.3535/3mv-6jz-h4j
title: Arcinella cornuta Conrad, 1866

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5av-k9e-jvc
title: Caecum trachea (Montagu, 1803)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xql-r0z-yqn
title: Placamen isabellina (R. A. Philippi, 1849)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6ep-q1z-0n7
title: Volvarina albolineata (A. d'Orbigny, 1842)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/p6v-cab-p3m
title: Bullia sendersi Kilburn, 1978

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jwq-kfa-svh
title: Naria erosa (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lz6-0rk-can
title: Lirabuccinum dirum (Reeve, 1846)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r9e-jge-5rp
title: Conus striatus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bay-3sn-b9e
title: Zoila marginata marginata (Gaskoin, 1849)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w7l-4tt-kjq
title: Dosinia tumida (Gray, 1838)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d16-ptm-d2j
title: Muricodrupa anaxares (Kiener, 1836)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ztr-2w3-c6t
title: Conus ardisiaceus Kiener, 1850

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8pc-5fy-f56
title: Mimachlamys asperrima (Lamarck, 1819)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/am2-k3d-n7z
title: Pusia zebrina (A. d'Orbigny, 1840)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nx9-32n-3ek
title: Melampus castaneus (Megerle von Mühlfeld, 1816)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fs3-z3t-9br
title: Setia H. Adams & A. Adams, 1852

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.wqnmfj
title: Occurrence Download

description: A dataset containing 5758245 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Motacilla alba Linnaeus, 1758"
 ]
}

 The dataset includes 5758245 records from 5634 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007145-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vr72ep
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Cardellina pusilla)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007628-250711103210423/datasets/export for details.
DOI: 10.15468/dl.9x4aqn
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AAC3231"
 ]
}

 The dataset includes 83 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007632-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15873816
title: Mass Distribution of Binary Black Hole Mergers from Young and Old Dense Star Clusters

description: Data behind Figures 3-6 of manuscript with title 'Mass Distribution of Binary Black Hole Mergers from Young and Old Dense Star Clusters' (https://arxiv.org/abs/2507.07183). Version 1 is the raw data. Version 2 is the processed data with updates to include the weigths calculated for the BBH mergers from the assumed cluster formation histories with redshift.
DOI: 10.5281/zenodo.15873799
title: Real-time instanton approach to quantum activation

description: A Real-time Instanton Approach to Quantum Activation

Description

This archive contains the complete computational repository for the research paper "A Real-time Instanton Approach to Quantum Activation" (arXiv:2409.00681), including all source code, documentation, and computational data files required for full reproducibility.

Contents

Source Code & Documentation:



Python package (src/metastable/) implementing the Keldysh field theory approach

Interactive documentation and derivations (docs/)

Visualization scripts for all figures

Test suite and configuration files


Computational Data Files (1.9 GB):



docs/fixed_points/examples/map.npz (12 MB) - Basic fixed point map data

docs/fixed_points/examples/map-with-stability.npz (233 MB) - Fixed points with stability analysis

docs/paths/sweeps/kappa/sweep/map.npz (735 MB) - Kappa parameter sweep results

docs/paths/sweeps/epsilon/sweep/map.npz (917 MB) - Epsilon parameter sweep results


Research Context

This work investigates quantum activation in driven dissipative systems far from equilibrium, focusing on how quantum noise associated with relaxation can lead to transitions between metastable states, even at zero temperature. The repository provides:



Theoretical Framework: Complete derivation of the Keldysh Lagrangian and auxiliary Hamiltonian formulation

Computational Methods: Implementation of fixed-point analysis and stability calculations

Parameter Studies: Comprehensive sweeps of system parameters (κ and ε)

Visualization Tools: Scripts to reproduce all figures in the publication


Usage Instructions



Extract Archive: unzip metastable-complete-with-data.zip

Install Dependencies: pip install -e . (requires Python ≥3.10)

Run Examples: Navigate to docs/fixed_points/examples/ or docs/paths/sweeps/

View Documentation: Open docs/index.md or visit the live documentation


Key Features



Fixed Point Analysis: Calculation and classification of system fixed points in the bistable regime

Stability Analysis: Eigenvalue analysis of the Jacobian at fixed points

Path Integration: Implementation of switching trajectory calculations

Interactive Visualizations: Plotly-based interactive plots for exploration


File Structure

metastable/   ├── src/metastable/          # Core Python package   ├── docs/                             # Documentation and examples    │   ├── fixed_points/         # Fixed point analysis    │   ├── paths/                     # Trajectory analysis    │   └── derivation/             # Theoretical derivations   ├── tests/                            # Test suite    └── README.md               # Setup and usage instructions
DOI: 10.5281/zenodo.15873850
title: Real-time instanton approach to quantum activation

description: A Real-time Instanton Approach to Quantum Activation

Description

This archive contains the complete computational repository for the research paper "A Real-time Instanton Approach to Quantum Activation" (arXiv:2409.00681), including all source code, documentation, and computational data files required for full reproducibility.

Contents

Source Code & Documentation:



Python package (src/metastable/) implementing the Keldysh field theory approach

Interactive documentation and derivations (docs/)

Visualization scripts for all figures

Test suite and configuration files


Computational Data Files (1.9 GB):



docs/fixed_points/examples/map.npz (12 MB) - Basic fixed point map data

docs/fixed_points/examples/map-with-stability.npz (233 MB) - Fixed points with stability analysis

docs/paths/sweeps/kappa/sweep/map.npz (735 MB) - Kappa parameter sweep results

docs/paths/sweeps/epsilon/sweep/map.npz (917 MB) - Epsilon parameter sweep results


Research Context

This work investigates quantum activation in driven dissipative systems far from equilibrium, focusing on how quantum noise associated with relaxation can lead to transitions between metastable states, even at zero temperature. The repository provides:



Theoretical Framework: Complete derivation of the Keldysh Lagrangian and auxiliary Hamiltonian formulation

Computational Methods: Implementation of fixed-point analysis and stability calculations

Parameter Studies: Comprehensive sweeps of system parameters (κ and ε)

Visualization Tools: Scripts to reproduce all figures in the publication


Usage Instructions



Extract Archive: unzip metastable-complete-with-data.zip

Install Dependencies: pip install -e . (requires Python ≥3.10)

Run Examples: Navigate to docs/fixed_points/examples/ or docs/paths/sweeps/

View Documentation: Open docs/index.md or visit the live documentation


Key Features



Fixed Point Analysis: Calculation and classification of system fixed points in the bistable regime

Stability Analysis: Eigenvalue analysis of the Jacobian at fixed points

Path Integration: Implementation of switching trajectory calculations

Interactive Visualizations: Plotly-based interactive plots for exploration


File Structure

metastable/   ├── src/metastable/          # Core Python package   ├── docs/                             # Documentation and examples    │   ├── fixed_points/         # Fixed point analysis    │   ├── paths/                     # Trajectory analysis    │   └── derivation/             # Theoretical derivations   ├── tests/                            # Test suite    └── README.md               # Setup and usage instructions
DOI: 10.15468/dl.wqbsy5
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypochaeris glabra",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 33 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007633-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cvqpny
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ACF3418"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007634-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8zx9hx
title: Occurrence Download

description: A dataset containing 180 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypochaeris radicata",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 180 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007635-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dyxx6n
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erimyzon sucetta kennerlii"
 ]
}

 The dataset includes 48 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007636-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w8hxyv
title: Occurrence Download

description: A dataset containing 1579 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Observation, Human Observation, Occurrence evidence)",
 "Country is one of (China, Russian Federation, Mongolia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Limnodromus semipalmatus",
 "Year 2015-2024"
 ]
}

 The dataset includes 1579 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007638-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4np4ht
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erimyzon sucetta sucetta"
 ]
}

 The dataset includes 106 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007639-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ttjcuz
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lactuca serriola",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 67 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007637-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.