cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34622/datarepositorium/zxjgnt
title: A aplicação de um questionário sobre a qualidade do atendimento aos utilizadores das bibliotecas dos Serviços de Documentação da Universidade do Minho: dados de 2018

description: No período de 02 a 16 de maio de 2018, os Serviços de Documentação da Universidade do Minho realizaram um inquérito por questionário aos utilizadores das suas bibliotecas: Biblioteca Geral da Universidade do Minho (U.M.) em Gualtar (BGUM), Biblioteca da U.M. em Guimarães (BPG), Biblioteca Prof. Joaquim Pinto Machado (BPM), Biblioteca Nuno Portas (BNP) e Biblioteca de Direito (BD). Dado que se pretendia avaliar a satisfação dos utilizadores das bibliotecas da U.M., o questionário aplicado foi o LibQual (adaptação do ServQual ao contexto das bibliotecas e utilizado por muitas em todo o mundo), muito embora numa versão reduzida. Mantendo-se a escala de avaliação de 1 a 9, apenas foi considerada a avaliação do serviço por dimensão (valor afetivo do serviço, biblioteca como espaço e controlo da informação). Às possibilidades de resposta foi acrescentada a opção "Não sabe/Sem opinião". O questionário foi disponibilizado via web através do sistema LimeSurvey e o acesso ao mesmo exigiu autenticação. As respostas obtidas foram exportadas para Excel. O questionário foi disponibilizado em português e inglês.
DOI: 10.34622/datarepositorium/cr7pu4
title: Data from Interviews - D3.3 Uptake of Open Science and Responsible Research and Innovation in Policy and Training

description: This dataset holds the files for the interviews performed for D3.3 - Uptake of Open Science and Responsible Research and Innovation in Policy and Training.
DOI: 10.34622/datarepositorium/fqnaru
title: Entrevista 1 - Responsável da Prática N_SB_2

description: Entrevista 1 - Responsável da Prática N_SB_2
DOI: 10.34622/datarepositorium/tyry0c
title: Plantas interpretadas da análise das unidades domésticas de Complutum

description: As plantas apresentadas foram elaboradas no ambito do trabalho para elaborar um corpus das domus de Bracara Augusta, que servisse de base para realizar análises comparativas com outros centros urbanos do NO peninsular, bem como com outras regiões da Hispânia. Para o efeito, foi indispensável desenhar e analisar as planimetrias das diferentes casas que se caracterizam pela diversidade de soluções formais, construtivas e funcionais. Entre os exemplares de casas que foram valorizados destacamos as de Complutum, Iuliobriga, Tongobriga, Augusta Emerita e Conimbriga, tendo-se produzido plantas interpretadas para efeitos de ilustração da nossa análise das unidades domésticas, algumas da quais são objeto de modelos 3D. The plans presented were elaborated in the scope of the work to elaborate a corpus of the domus of Bracara Augusta, which would serve as a basis to carry out comparative analyzes with other urban centers in the NW peninsular, as well as with other regions of Hispania. For this purpose, it was essential to design and analyze the planimetry of the different houses that are characterized by the diversity of formal, constructive and functional solutions. Among the examples of houses that were valued we highlight those of Complutum, Iuliobriga, Tongobriga, Augusta Emerita and Conimbriga, having produced plants interpreted for the purpose of illustrating our analysis of domestic units, some of which are the subject of 3D models.
DOI: 10.34622/datarepositorium/zvinfq
title: Entrevista 5 - Responsável da Prática S_CB

description: Entrevista 5 - Responsável da Prática S_CB
DOI: 10.34622/datarepositorium/fdgiaf
title: Inquérito de satisfação aos participantes do 5.º Fórum de Gestão de Dados de Investigação

description: O presente inquérito de satisfação foi concebido pela Comissão Organizadora do 5.º Fórum GDI (http://forumgdi.rcaap.pt) que aconteceu na Universidade de Aveiro, no dia 22 de Novembro de 2019. O objetivo deste inquérito foi aferir da qualidade do evento e recolher sugestões, opiniões e comentários com vista à realização de futuros eventos dentro desta temática. O inquérito foi disponibilizado via Google Forms e as respostas exportadas para excel. O inquérito foi enviado por email a um total de 125 participantes e esteve aberto à recolha de respostas entre os dias 24 de novembro e 13 dezembro de 2019. Foram recebidas 59 respostas.
DOI: 10.34622/datarepositorium/gmsowl
title: Pub IN, boas práticas e inovações científicas em revistas

description: O projeto PUB IN surge com o objetivo de fortalecer a publicação científica periódica em Portugal, tendo entre os seus objetivos o apoio à comunidade editorial. Após 2 anos de atividade, interessa perspetivar o impacto deste apoio. Através dos dados recolhidos (por questionário online), pretende-se aferir a relação entre a implementação de inovações e boas práticas em revistas científicas portuguesas e a participação em webinares e/ou uso de material produzido no contexto do projeto PUB IN. O questionário destina-se a membros da gestão editorial de revistas científicas portuguesas. O questionário foi aplicado entre 12 de abril e 19 de maio, tendo-se obtido respostas de 63 membros de equipas editoriais.
DOI: 10.34622/datarepositorium/lcnrsf
title: NE_SB - Perspetivas multi-ator/Multi-actor perspectives

description: Grupos Focais com atores envolvidos na Prática NE_SB
DOI: 10.34622/datarepositorium/o2e2lo
title: Data from survey - D3.3 Uptake of Open Science and Responsible Research and Innovation in Policy and Training

description: This dataset comprises data for the D3.3 - Uptake of Open Science and Responsible Research and Innovation survey
DOI: 10.34622/datarepositorium/qieua0
title: Mental Health on campus: personality traits and attitudes towards seeking psychological help

description: This file presents the data collected to study the relationship between personality traits and attitudes towards seeking help. Additionally, students' knowledge of available psychological help and their intention to seek help.
DOI: 10.34622/datarepositorium/si73df
title: Thymic function as a predictor of immune recovery in chronically HIV-infected patients initiating antiretroviral therapy

description: Dataset containing data related to the article "Thymic function as a predictor of immune recovery in chronically HIV-infected patients initiating antiretroviral therapy" (doi: 10.3389/fimmu.2019.00025).
DOI: 10.34622/datarepositorium/smn7ys
title: A aplicação de um questionário sobre a qualidade do atendimento aos utilizadores das bibliotecas dos Serviços de Documentação da Universidade do Minho: dados de 2015

description: No período de 16 a 30 de novembro de 2015, os Serviços de Documentação da Universidade do Minho realizaram um inquérito por questionário aos utilizadores das suas bibliotecas: Biblioteca Geral da Universidade do Minho (U.M.) em Gualtar (BGUM), Biblioteca da U.M. em Guimarães (BPG), Biblioteca da Escola de Ciências da Saúde (BECS) e Biblioteca Nuno Portas. Dado que se pretendia avaliar a qualidade do atendimento, a aplicação do questionário foi feita por amostra aleatória nos balcões de atendimento das referidas bibliotecas. Após atos de atendimento, os funcionários dos respetivos balcões enviaram o questionário online aos utilizadores solicitando a sua colaboração. O questionário foi disponibilizado via web através do sistema LimeSurvey e o acesso ao mesmo exigiu autenticação. As respostas obtidas foram exportadas para Excel.
DOI: 10.34622/datarepositorium/uy7mfa
title: Use of Open Government Data in the Brazilian States and Federal District Public Administrations

description: Each row of the dataset lists the responses to a questionnaire about the use (consumption) of open government data (OGD) in the Brazilian states and federal district public administrations. The questionnaire was applied between June 10 and July 9, 2021, in a sample of focal points designated by the GTD.GOV. The dataset contains 26 lines, one response per Federation Unit, except for the State of São Paulo, which did not answer the survey. Thus, this dataset represents the perspective of each federation unit participating in the survey. Respondents were instructed to offer the view of their Federation Unit, as they are state officials responsible for open data in their administrations. After collection, we exported the data to Excel. The resulting dataset was cleaned and is in a table format. Questionnaire responses are provided in two files ResultsSurvey_OGDUseBRStatesDF_DataSet_PT and ResultsSurvey_OGDUseBRStatesDF_DataSet_EN. They contain the same information in Portuguese and English. V2 - Added a dataset with the extracts of interviews conducted with three states. Each row of this dataset has six columns: Factor Code shows the factor code as it appears in the questionnaire. A factor code represents benefit (BE), barrier (BA), enabler (E), driver (D), or N/A when the factor does not exist in the questionnaire or when it is the response to a question, such as why OGD is used in the public sector. The column Factor Description Portuguese describes the factor in Portuguese. The column Factor Description English presents the factor description in English. The column Interviewee holds the interviewee code. The column Extract Portuguese has an excerpt of the transcribed interview in Portuguese that provide evidence of the factor. Finally, the column Extract English presents the translation of the Portuguese extract. Interviews extracts are provided in the file InterviewExtracts_BR_StatesDF_Dataset and metadata in the AboutBR_StatesDF.
DOI: 10.17909/4gtt-vx70
title: Data used to derive the IMF for the Cloud 2 clusters.
DOI: 10.6084/m9.figshare.25428589
title: ACCESS-ESM1-5_01_07_2010_2100

description: This zip file covers the global near-surface air temperature dataset of ACCESS-ESM1-5 at January and July from 2001-2100.
DOI: 10.6084/m9.figshare.25428589.v1
title: ACCESS-ESM1-5_01_07_2010_2100

description: This zip file covers the global near-surface air temperature dataset of ACCESS-ESM1-5 at January and July from 2001-2100.
DOI: 10.6084/m9.figshare.25432984
title: <b>ice_crystal_cloud_lidar_datas</b>

description: Using a coherent Doppler wind lidar, the whole process of formation and decomposition of ice crystal cloud was recorded in MinFeng (37.06 °N, 82.69 °E) on the southern edge of the Taklimakan Desert from 5 to 6 February, 2022
DOI: 10.6084/m9.figshare.25432984.v1
title: <b>ice_crystal_cloud_lidar_datas</b>

description: Using a coherent Doppler wind lidar, the whole process of formation and decomposition of ice crystal cloud was recorded in MinFeng (37.06 °N, 82.69 °E) on the southern edge of the Taklimakan Desert from 5 to 6 February, 2022
DOI: 10.5281/zenodo.10815601
title: International shipping in a world below 2°C

description: The decarbonisation of shipping has become an important policy goal. While Integrated Assessment Models (IAMs) are often used to explore climate mitigation strategies, they typically provide little information on international shipping, which accounts for emissions of around 0.7 GtCO2/yr. Here we perform a multi-IAM analysis of international shipping and show the potential for decreasing annual emissions in the next decades, with reductions up to 86% by 2050. This is primarily achieved through the deployment of low-carbon fuels. Models that represent several potential low-carbon alternatives tend to show a deeper decarbonisation of international shipping, with drop-in biofuels, renewable alcohols and green ammonia standing out as the main substitutes of conventional maritime fuels. While our results align with the 2018 emissions reduction goal of the International Maritime Organization, their compatibility with the agency’s revised target is still subject to a more definitive interpretation.
DOI: 10.5281/zenodo.10815602
title: International shipping in a world below 2°C

description: The decarbonisation of shipping has become an important policy goal. While Integrated Assessment Models (IAMs) are often used to explore climate mitigation strategies, they typically provide little information on international shipping, which accounts for emissions of around 0.7 GtCO2/yr. We perform the first multi-IAM analysis of international shipping, drawing on the results of six global models. Results indicate the need for decreasing annual emissions in the next decades, with reductions up to 86% by 2050. This is primarily achieved through the deployment of low-carbon fuels. Models that represent several potential low-carbon alternatives tend to show a deeper decarbonisation of international shipping, with drop-in biofuels, renewable alcohols and green ammonia standing out as the main substitutes of conventional maritime fuels. While our results align with the 2018 emissions reduction goal of the International Maritime Organization, their compatibility with the agency’s revised target is still subject to a more definitive interpretation.
DOI: 10.5281/zenodo.10836455
title: International shipping in a world below 2°C

description: The decarbonisation of shipping has become an important policy goal. While Integrated Assessment Models (IAMs) are often used to explore climate mitigation strategies, they typically provide little information on international shipping, which accounts for emissions of around 0.7 GtCO2/yr. Here we perform a multi-IAM analysis of international shipping and show the potential for decreasing annual emissions in the next decades, with reductions up to 86% by 2050. This is primarily achieved through the deployment of low-carbon fuels. Models that represent several potential low-carbon alternatives tend to show a deeper decarbonisation of international shipping, with drop-in biofuels, renewable alcohols and green ammonia standing out as the main substitutes of conventional maritime fuels. While our results align with the 2018 emissions reduction goal of the International Maritime Organization, their compatibility with the agency’s revised target is still subject to a more definitive interpretation.
DOI: 10.6084/m9.figshare.25403698.v2
title: Data from: Pre-Failure Operational Anomalies of the Kakhovka Dam Revealed by Satellite Data

description: Qing Yang, Xinyi Shen, Kang He, Qingyuan Zhang, Sean Helfrich, William Straka III, Josef M. Kellndorfer, Emmanouil N. AnagnostouAbstract:On June 6, 2023, the Kakhovka Dam in Ukraine experienced a catastrophic breach that led to the loss of life and substantial economic values. Prior to the breach, the supporting structures downstream of the spillway had shown signs of being compromised. Here, we use multi-source satellite data, meteorological reanalysis, and dam design criteria to document the dam’s pre-failure condition. We find that anomalous operation of the Kakhovka dam began in November 2022, following the destruction of a bridge segment, which led to persistent overtopping from late April 2023 up to the breach, contributing to the erosion of the spillway foundation. Moreover, our findings also highlight safety and risk-reduction measures pivotal in avoiding such scenarios. To help prevent future disasters, we advocate for greater transparency in the design parameters of key water structures to enable risk management, and conclude that remote sensing technology can help ensuring water infrastructure safety.Data repository corresponding to: yang2473@uwm.eduThis repository contains underlying data for the main manuscript figures. Data for Figure 2 is from PlanetScope. Other raw data source are also concluded as follows:The Sentinel-2 and Landsat images used in this study are accessible at https://www.sentinel-hub.com/index.html. The PlanetScope images are obtained through https://www.planet.com/. The Sentinel-1 images were acquired from https://asf.alaska.edu/. The reservoir water levels can be found at https://ipad.fas.usda.gov/cropexplorer/global_reservoir/. The GloFAS-ERA5 river discharge reanalysis data are available at https://cds.climate.copernicus.eu/cdsapp#!/dataset/cems-glofas-historical?tab=overview.
DOI: 10.6084/m9.figshare.25433032
title: Untitled Item-<b>Assessing the role of Programmed Cell Death signatures and related gene TOP2A in progression and prognostic prediction of clear cell renal cell carcinoma</b>

description: Kidney Clear Cell Carcinoma (KIRC), the predominant form of kidney cancer, exhibits a diverse therapeutic response to Immune Checkpoint Inhibitors (ICIs), highlighting the need for predictive models of ICI efficacy. Our study has constructed a prognostic model based on 13 types of Programmed Cell Death (PCD), which are intertwined with tumor progression and the immune microenvironment. Validated by analyses of comprehensive datasets, this model identifies seven key PCD genes that delineate two subtypes with distinct immune profiles and sensitivities to anti-PD-1 therapy. The high-PCD group demonstrates a more immune-suppressive environment, while the low-PCD group shows better responses to PD-1 treatment. In particular, TOP2A emerged as crucial, with its inhibition markedly reducing KIRC cell growth and mobility. These findings underscore the relevance of PCDs in predicting KIRC outcomes and immunotherapy response, with implications for enhancing clinical decision-making.
DOI: 10.6084/m9.figshare.25433032.v1
title: Untitled Item-<b>Assessing the role of Programmed Cell Death signatures and related gene TOP2A in progression and prognostic prediction of clear cell renal cell carcinoma</b>

description: Kidney Clear Cell Carcinoma (KIRC), the predominant form of kidney cancer, exhibits a diverse therapeutic response to Immune Checkpoint Inhibitors (ICIs), highlighting the need for predictive models of ICI efficacy. Our study has constructed a prognostic model based on 13 types of Programmed Cell Death (PCD), which are intertwined with tumor progression and the immune microenvironment. Validated by analyses of comprehensive datasets, this model identifies seven key PCD genes that delineate two subtypes with distinct immune profiles and sensitivities to anti-PD-1 therapy. The high-PCD group demonstrates a more immune-suppressive environment, while the low-PCD group shows better responses to PD-1 treatment. In particular, TOP2A emerged as crucial, with its inhibition markedly reducing KIRC cell growth and mobility. These findings underscore the relevance of PCDs in predicting KIRC outcomes and immunotherapy response, with implications for enhancing clinical decision-making.
DOI: 10.5281/zenodo.10829161
title: Model training and testing pickle files in "pepMTL"

description: This is the model training and testing file for the pepMTL model from the article "pepMTL: a synchronous multi-properties predictor for peptides enabled by multi-task framework and pre-trained protein language model". Please download the following two pickle files and place them in the "./pepMTL/fine_tune_data/" directory for model training and testing.

这是文章 "pepMTL: a synchronous multi-properties predictor for peptides enabled by multi-task framework and pre-trained protein language model"中pepMTL模型训练以及测试文件,请将这两个pickle文件下载并放置在“./pepMTL/fine_tune_data/”路径下用于模型训练与测试。
DOI: 10.5281/zenodo.10829160
title: Model training and testing pickle files in "pepMTL"

description: This is the model training and testing file for the pepMTL model from the article "pepMTL: a synchronous multi-properties predictor for peptides enabled by multi-task framework and pre-trained protein language model". Please download the following two pickle files and place them in the "./pepMTL/fine_tune_data/" directory for model training and testing.

这是文章 "pepMTL: a synchronous multi-properties predictor for peptides enabled by multi-task framework and pre-trained protein language model"中pepMTL模型训练以及测试文件,请将这两个pickle文件下载并放置在“./pepMTL/fine_tune_data/”路径下用于模型训练与测试。
DOI: 10.5281/zenodo.10685804
title: Clonally resolved spatial transcriptomics data of mouse spleen

description: The BGI Stereo-seq strategy was applied to a mouse spleen sample containing SPLINTR barcoded AML cells.

Data generated with https://github.com/DaneVass/bartools_manuscript_code/blob/main/spatial-analysis/data_preprocessing_m4_paper.py.

mouse4_bin*_bc_counts.tsv:Binned barcode counts across whole slide.Can be merged with AnnData file by `cell_id`.Contains all barcodes detected in a bin (`barcode`) and UMI counts summed by bin (`count_binned`).`isin_adata` marks whether the bin is on the manually segmented tissue section.

mouse4_bin*_bc_counts_top1.tsv:Binned barcode counts on tissue section, barcode with most UMI per bin is selected. 

mouse4_bin*_bc.h5ad:Binned stereo-seq data with barcode information.

mouse4_bin*_bc_clustered.h5ad:Filtered, log1p transformed, scaled, clustered stereo-seq data.Data is not zero centered for bin10 for memory efficiency.
DOI: 10.5281/zenodo.10685805
title: Clonally resolved spatial transcriptomics data of mouse spleen

description: The BGI Stereo-seq strategy was applied to a mouse spleen sample containing SPLINTR barcoded AML cells.

Data generated with https://github.com/DaneVass/bartools_manuscript_code/blob/main/spatial-analysis/data_preprocessing_m4_paper.py.

mouse4_bin*_bc_counts.tsv:Binned barcode counts across whole slide.Can be merged with AnnData file by `cell_id`.Contains all barcodes detected in a bin (`barcode`) and UMI counts summed by bin (`count_binned`).`isin_adata` marks whether the bin is on the manually segmented tissue section.

mouse4_bin*_bc_counts_top1.tsv:Binned barcode counts on tissue section, barcode with most UMI per bin is selected. 

mouse4_bin*_bc.h5ad:Binned stereo-seq data with barcode information.

mouse4_bin*_bc_clustered.h5ad:Filtered, log1p transformed, scaled, clustered stereo-seq data.Data is not zero centered for bin10 for memory efficiency.
DOI: 10.5281/zenodo.10483947
title: 16S rRNA analysis of feces from mouse with methionine, tryptophan, and niacin deficiency
DOI: 10.5281/zenodo.10483948
title: 16S rRNA analysis of feces from mouse with methionine, tryptophan, and niacin deficiency
DOI: 10.6084/m9.figshare.25424953
title: Projecting Cropland Climate Potential Productivity Change in China Under Human Activity and Climate Forcing

description: Eight scenario-based LULC at 1-km resolution during 2020~2100 (one period per decade) in China under the Shared Socioeconomic Pathways and Representative Concentration Pathways (SSP-RCPs) scenarios
DOI: 10.6084/m9.figshare.25424953.v1
title: Projecting Cropland Climate Potential Productivity Change in China Under Human Activity and Climate Forcing

description: Eight scenario-based LULC at 1-km resolution during 2020~2100 (one period per decade) in China under the Shared Socioeconomic Pathways and Representative Concentration Pathways (SSP-RCPs) scenarios
DOI: 10.6084/m9.figshare.25433137
title: Retrobulbar Catheter Data.xlsx

description: Randomized, controlled crossover experiment evaluating the effects of local anesthetic delivery via an indwelling retrobulbar catheter on corneal sensitivity, pupil size, pupillary light responses (PLRs), and ocular motility in normal horses
DOI: 10.6084/m9.figshare.25433137.v1
title: Retrobulbar Catheter Data.xlsx

description: Randomized, controlled crossover experiment evaluating the effects of local anesthetic delivery via an indwelling retrobulbar catheter on corneal sensitivity, pupil size, pupillary light responses (PLRs), and ocular motility in normal horses