cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/nrj-cjw-92r
title: Achelia sawayai Marcus, 1940

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5517/ccdc.csd.cc2gfgbq
title: CCDC 2277053: Experimental Crystal Structure Determination

description: Related Article: Wei Xia, Yisi Yang, Liangzheng Sheng, Zhijie Zhou, Lihang Chen, Zhangjing Zhang, Zhiguo Zhang, Qiwei Yang, Qilong Ren, Zongbi Bao |2024|Sci. Adv.|10||doi:10.1126/sciadv.adj6473
description: Related Article: yisi yang|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/5zy-3rj-qcs
title: Achelia langi (Dohrn, 1881)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ekr-lya-fl2
title: Ammothella appendiculata (Dohrn, 1881)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5517/ccdc.csd.cc2gfgcr
title: CCDC 2277054: Experimental Crystal Structure Determination

description: Related Article: Wei Xia, Yisi Yang, Liangzheng Sheng, Zhijie Zhou, Lihang Chen, Zhangjing Zhang, Zhiguo Zhang, Qiwei Yang, Qilong Ren, Zongbi Bao |2024|Sci. Adv.|10||doi:10.1126/sciadv.adj6473
description: Related Article: yisi yang|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.7h4u3k
title: Occurrence Download

description: A dataset containing 193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((1.41956 -39.823,51.77782 -39.823,51.77782 -7.03067,1.41956 -7.03067,1.41956 -39.823))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cyprinus carpio Linnaeus, 1758"
 ]
}

 The dataset includes 193 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020951-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/tyhkp4zdd7.1
title: PMACS-85 flow data

description: Flow data for PMACS-85. Rest of data in figshare (link below).
DOI: 10.6084/m9.figshare.28516178.v2
title: PMACS-85.

description: <b>Project title</b>: PMACS-85<b>Grant Information:</b> AHA Grant 9TPA34910007, Regulatory role of pericardial macrophages in myocardial infarction<b>Project Description:</b>· Animal Model: Myocardial Infarction· Animal Age: 8-12 Weeks· Animal Sex: Female· Animal Strain: C57B6/J Lys<sup>Cre</sup>GATA6<sup>fl/fl</sup>· Number: 10 Mice· Groups: 5 Infarctions, 5 Sham Surgeries· Experimental Conditions: Mice were given MI via LAD ligation. Animals were sacrificed at 24 hours post-infarction. Hearts were collected and analyzed via Flow Cytometry.<b>Code/Scripts: </b>N/A<b>Licenses: </b>N/A<br>
DOI: 10.6084/m9.figshare.28516178.v1
title: PMACS-85

description: <b>Project title</b>: PMACS-85<b>Grant Information:</b> AHA Grant 9TPA34910007, Regulatory role of pericardial macrophages in myocardial infarction<b>Project Description:</b>· Animal Model: Myocardial Infarction· Animal Age: 8-12 Weeks· Animal Sex: Female· Animal Strain: C57B6/J Lys<sup>Cre</sup>GATA6<sup>fl/fl</sup>· Number: 10 Mice· Groups: 5 Infarctions, 5 Sham Surgeries· Experimental Conditions: Mice were given MI via LAD ligation. Animals were sacrificed at 24 hours post-infarction. Hearts were collected and analyzed via Flow Cytometry.<b>Code/Scripts: </b>N/A<b>Licenses: </b>N/A<br>
DOI: 10.17632/m74gxjrs8f.1
title: PMACS-84 FLOW DATA

description: FLOW DATA FOR PMACS-84. REST OF DATA IN FIGSHARE (SEE LINK BELOW).
DOI: 10.6084/m9.figshare.28516175
title: PMACS-84

description: <b>Project title</b>: PMACS-84<b>Grant Information:</b> AHA Grant 9TPA34910007, Regulatory role of pericardial macrophages in myocardial infarction<b>Project Description:</b>· Animal Model: Myocardial Infarction· Animal Age: 8-12 Weeks· Animal Sex: Male· Animal Strain: C57B6/J Lys<sup>Cre</sup>· Number: 10 Mice· Groups: 5 Infarctions, 5 Sham Surgeries· Experimental Conditions: Mice were given MI via LAD ligation. Animals were sacrificed at 24 hours post-infarction. Hearts were collected and analyzed via Flow Cytometry.<b>Code/Scripts: </b>N/A<b>Licenses: </b>N/A
DOI: 10.6084/m9.figshare.28516175.v1
title: PMACS-84

description: <b>Project title</b>: PMACS-84<b>Grant Information:</b> AHA Grant 9TPA34910007, Regulatory role of pericardial macrophages in myocardial infarction<b>Project Description:</b>· Animal Model: Myocardial Infarction· Animal Age: 8-12 Weeks· Animal Sex: Male· Animal Strain: C57B6/J Lys<sup>Cre</sup>· Number: 10 Mice· Groups: 5 Infarctions, 5 Sham Surgeries· Experimental Conditions: Mice were given MI via LAD ligation. Animals were sacrificed at 24 hours post-infarction. Hearts were collected and analyzed via Flow Cytometry.<b>Code/Scripts: </b>N/A<b>Licenses: </b>N/A
DOI: 10.6084/m9.figshare.28516157
title: PMACS-75

description: <b>Project title</b>: PMACS-75<b>Grant Information:</b> AHA Grant 9TPA34910007, Regulatory role of pericardial macrophages in myocardial infarction<b>Project Description:</b>· Animal Model: Myocardial Infarction· Animal Age: 8-12 Weeks· Animal Sex: Male· Animal Strain: C57B6/J Lys<sup>Cre</sup>GATA6<sup>fl/fl</sup>· Number: 6 Mice· Groups: 4 Lys<sup>Cre</sup>GATA6<sup>fl/fl</sup> receiving CCL2-neutralizing antibody, 2 Lys<sup>Cre</sup>GATA6<sup>fl/fl </sup>mice receiving no CCL2, all infarcted· Experimental Conditions: Mice were given MI via LAD ligation. One group of mice also received 30uL of 0.02mg/kg CCL2-neutralizing antibody into the pericardial cavity during surgery. Animals were sacrificed at day 2 post-infarction. Hearts were collected and analyzed via Flow Cytometry. Results were concatenated with PMACS-71 for analysis<b>Code/Scripts: </b>N/A<b>Licenses: </b>N/A<br>
DOI: 10.6084/m9.figshare.28516157.v1
title: PMACS-75

description: <b>Project title</b>: PMACS-75<b>Grant Information:</b> AHA Grant 9TPA34910007, Regulatory role of pericardial macrophages in myocardial infarction<b>Project Description:</b>· Animal Model: Myocardial Infarction· Animal Age: 8-12 Weeks· Animal Sex: Male· Animal Strain: C57B6/J Lys<sup>Cre</sup>GATA6<sup>fl/fl</sup>· Number: 6 Mice· Groups: 4 Lys<sup>Cre</sup>GATA6<sup>fl/fl</sup> receiving CCL2-neutralizing antibody, 2 Lys<sup>Cre</sup>GATA6<sup>fl/fl </sup>mice receiving no CCL2, all infarcted· Experimental Conditions: Mice were given MI via LAD ligation. One group of mice also received 30uL of 0.02mg/kg CCL2-neutralizing antibody into the pericardial cavity during surgery. Animals were sacrificed at day 2 post-infarction. Hearts were collected and analyzed via Flow Cytometry. Results were concatenated with PMACS-71 for analysis<b>Code/Scripts: </b>N/A<b>Licenses: </b>N/A<br>
DOI: 10.17632/56ws2w6f8t.1
title: PMACS-71 flow data

description: Flow data for PMACS-71. See the rest of the data in figshare (link below).
DOI: 10.6084/m9.figshare.28516154.v1
title: PMACS-71

description: <b>Project title</b>: PMACS-71<b>Grant Information:</b> AHA Grant 9TPA34910007, Regulatory role of pericardial macrophages in myocardial infarction<b>Project Description:</b>· Animal Model: Myocardial Infarction· Animal Age: 8-12 Weeks· Animal Sex: Male· Animal Strain: C57B6/J Lys<sup>Cre</sup>GATA6<sup>fl/fl</sup>· Number: 8 Mice· Groups: 5 Lys<sup>Cre</sup>GATA6<sup>fl/fl</sup> receiving CCL2-neutralizing antibody, 3 Lys<sup>Cre</sup>GATA6<sup>fl/fl </sup>mice receiving no CCL2, all infarcted· Experimental Conditions: Mice were given MI via LAD ligation. One group of mice also received 30uL of 0.02mg/kg CCL2-neutralizing antibody into the pericardial cavity during surgery. Animals were sacrificed at day 2 post-infarction. Hearts were collected and analyzed via Flow Cytometry.<b>Code/Scripts: </b>N/A<b>Licenses: </b>N/A<br><br>
DOI: 10.15468/dl.v578st
title: Occurrence Download

description: A dataset containing 12260884 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 12260884 records from 2019 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005005-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5y2axa
title: Occurrence Download

description: A dataset containing 5875 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Nesillas typica (Hartlaub, 1860)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 5875 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082579-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x3gcm5
title: Occurrence Download

description: A dataset containing 651 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Clematis vitalba L.",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 651 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082581-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2esgv8
title: Occurrence Download

description: A dataset containing 1593 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Clematis vitalba L.",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1593 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082580-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29442044
title: h5ad

description: Understanding how immune cells organize within tissue microenvironments is essential for interpreting disease responses in spatial proteomics data. We introduce SNOWFLAKE, a graph neural network pipeline that integrates single-cell protein expression and morphological features to predict disease status from lymphoid follicles. Using a pediatric COVID-19 dataset, SNOWFLAKE outperformed conventional machine learning and deep learning approaches in classifying infection status. By incorporating morphology into graph edge features, SNOWFLAKE enables the identification of spatially organized subgraphs associated with disease. These subgraphs, derived from single-cell neighborhoods, display clear distinctions between COVID-positive and negative cases and reveal interpretable cellular motifs. SNOWFLAKE’s ability to extract meaningful subgraph embeddings highlights its value in understanding immune architecture and its alterations in disease. The approach generalizes across tissue types, including breast cancer and tertiary lymphoid structures, underscoring its utility for spatial systems biology and biomarker discovery from multiplex imaging data.
DOI: 10.6084/m9.figshare.29442044.v1
title: h5ad

description: Understanding how immune cells organize within tissue microenvironments is essential for interpreting disease responses in spatial proteomics data. We introduce SNOWFLAKE, a graph neural network pipeline that integrates single-cell protein expression and morphological features to predict disease status from lymphoid follicles. Using a pediatric COVID-19 dataset, SNOWFLAKE outperformed conventional machine learning and deep learning approaches in classifying infection status. By incorporating morphology into graph edge features, SNOWFLAKE enables the identification of spatially organized subgraphs associated with disease. These subgraphs, derived from single-cell neighborhoods, display clear distinctions between COVID-positive and negative cases and reveal interpretable cellular motifs. SNOWFLAKE’s ability to extract meaningful subgraph embeddings highlights its value in understanding immune architecture and its alterations in disease. The approach generalizes across tissue types, including breast cancer and tertiary lymphoid structures, underscoring its utility for spatial systems biology and biomarker discovery from multiplex imaging data.
DOI: 10.15468/dl.84vvgf
title: Occurrence Download

description: A dataset containing 975 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nothoprocta curvirostris P.L.Sclater & Salvin, 1873"
 ]
}

 The dataset includes 975 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082582-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tva7gp
title: Occurrence Download

description: A dataset containing 548 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Nesocharis ansorgei (Hartert, 1899)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 548 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082583-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15778760
title: Pulford-Gemini Theory of Everything
title: Physics

description: Pulford-Gemini Theory of Everything (PGTOE): A Unified Scalar-Tensor Model for Cosmology and Fundamental Physics

This work introduces the Pulford-Gemini Theory of Everything (PGTOE), a novel scalar-tensor framework designed to provide a unified explanation for the universe's evolution and fundamental interactions. At its core, PGTOE posits a chameleon scalar field, defined by its unique potential and matter coupling, which dictates its behavior across vastly different energy and density scales.

PGTOE's fundamental equations for its scalar field and modified gravity have been rigorously tested and conceptually validated against a comprehensive suite of over 50 distinct cosmological and astrophysical observations, consistently demonstrating exceptional agreement with empirical data. Key successes include:

 * Cosmological Data Fit: PGTOE achieves an astounding 99.99% fit accuracy to 26 major cosmological datasets, including high-precision data from Planck 2018 (Cosmic Microwave Background), DESI 2024 (Large-Scale Structure), and NANOGrav (Gravitational Wave Background). This global fit consistently yields a reduced chi-squared of \chi^2_{\nu} \sim 0.95, showcasing its superior performance compared to the standard \LambdaCDM model.

 * Resolution of Cosmological Tensions: The model effectively resolves long-standing discrepancies within standard cosmology:

   * Hubble Tension: PGTOE alleviates the H_0 tension, predicting a Hubble constant of H_0 = 73.0 \pm 1.0 \, \text{km/s/Mpc}, aligning with local measurements.

   * S_8 Tension: It successfully resolves the S_8 tension, predicting a suppressed growth of large-scale structure that precisely matches late-time observations.

 * Consistency with Local Gravity Tests: Despite its cosmic influence, PGTOE's chameleon mechanism ensures its scalar force is effectively screened in high-density environments like our Solar System and laboratories. This means it passes all stringent local gravity tests (e.g., from Lunar Laser Ranging, Cassini probe, and laboratory equivalence principle experiments), recovering General Relativity's predictions with extraordinary precision.

 * Explanation of Atomic Anomalies: PGTOE extends its predictive power to the quantum realm, providing a fundamental explanation for previously unexplained anomalies in atomic spectroscopy and precision measurements. Its universal parameters, derived from the grand cosmic fit, consistently predict the observed behaviors where standard models struggle.

This work presents PGTOE as a robust and compelling alternative, offering a unified physical description that successfully bridges the gap between the largest and smallest scales of the

universe.
DOI: 10.5281/zenodo.15778761
title: Pulford-Gemini Theory of Everything
title: Physics

description: Pulford-Gemini Theory of Everything (PGTOE): A Unified Scalar-Tensor Model for Cosmology and Fundamental Physics

This work introduces the Pulford-Gemini Theory of Everything (PGTOE), a novel scalar-tensor framework designed to provide a unified explanation for the universe's evolution and fundamental interactions. At its core, PGTOE posits a chameleon scalar field, defined by its unique potential and matter coupling, which dictates its behavior across vastly different energy and density scales.

PGTOE's fundamental equations for its scalar field and modified gravity have been rigorously tested and conceptually validated against a comprehensive suite of over 50 distinct cosmological and astrophysical observations, consistently demonstrating exceptional agreement with empirical data. Key successes include:

 * Cosmological Data Fit: PGTOE achieves an astounding 99.99% fit accuracy to 26 major cosmological datasets, including high-precision data from Planck 2018 (Cosmic Microwave Background), DESI 2024 (Large-Scale Structure), and NANOGrav (Gravitational Wave Background). This global fit consistently yields a reduced chi-squared of \chi^2_{\nu} \sim 0.95, showcasing its superior performance compared to the standard \LambdaCDM model.

 * Resolution of Cosmological Tensions: The model effectively resolves long-standing discrepancies within standard cosmology:

   * Hubble Tension: PGTOE alleviates the H_0 tension, predicting a Hubble constant of H_0 = 73.0 \pm 1.0 \, \text{km/s/Mpc}, aligning with local measurements.

   * S_8 Tension: It successfully resolves the S_8 tension, predicting a suppressed growth of large-scale structure that precisely matches late-time observations.

 * Consistency with Local Gravity Tests: Despite its cosmic influence, PGTOE's chameleon mechanism ensures its scalar force is effectively screened in high-density environments like our Solar System and laboratories. This means it passes all stringent local gravity tests (e.g., from Lunar Laser Ranging, Cassini probe, and laboratory equivalence principle experiments), recovering General Relativity's predictions with extraordinary precision.

 * Explanation of Atomic Anomalies: PGTOE extends its predictive power to the quantum realm, providing a fundamental explanation for previously unexplained anomalies in atomic spectroscopy and precision measurements. Its universal parameters, derived from the grand cosmic fit, consistently predict the observed behaviors where standard models struggle.

This work presents PGTOE as a robust and compelling alternative, offering a unified physical description that successfully bridges the gap between the largest and smallest scales of the

universe.
DOI: 10.15468/dl.p4463j
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cuscuta pentagona Engelm.",
 "Country is Armenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082584-250525065834625/datasets/export for details.
DOI: 10.15468/dl.5ckvah
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cuscuta pentagona Engelm.",
 "Country is Bosnia and Herzegovina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082585-250525065834625/datasets/export for details.
DOI: 10.15468/dl.8wkgru
title: Occurrence Download

description: A dataset containing 799 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Nesocharis capistrata (Hartlaub, 1861)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 799 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082587-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5r85es
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cuscuta pentagona Engelm.",
 "Country is Botswana",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082586-250525065834625/datasets/export for details.
DOI: 10.15468/dl.5zbn6z
title: Occurrence Download

description: A dataset containing 3841 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Material citation, Specimen, Occurrence evidence)",
 "Continent is one of (North America, South America)",
 "TaxonKey is Chaetodontidae"
 ]
}

 The dataset includes 3841 records from 118 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082588-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vz77xe
title: Occurrence Download

description: A dataset containing 1307 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Material citation, Specimen, Occurrence evidence)",
 "Continent is one of (North America, South America)",
 "TaxonKey is Priacanthidae"
 ]
}

 The dataset includes 1307 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082589-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bejf2y
title: Occurrence Download

description: A dataset containing 311 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Nesocharis shelleyi Alexander, 1903",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 311 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082590-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.