cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/8c4n535x9z.2
title: Soil Moisture Routing (SMR) Modeling of Targeted Biochar Amendment in Undulating Topographies: An Analysis of Biochar’s Effects on Streamflow

description: This research models biochar's ability to alter hydrologic fluxes in undulating topographies. Using numerical modeling and water balance/Soil moisture Routing (SMR) techniques, biochar was shown to influence lateral flow, streamflow, percolation, and evapotranspiration. In this repository, the 5-cell model that was developed is presented. This model relies upon the work done by Frankeburger et al., 1999 ("A GIS-based variable source area hydrology model"). This excel file includes the 5-cell model, sensitivity analysis, statistical analysis, and graphs that include storage and effects on each hydrologic fluxes. The model utilizes data from a nearby SNOTEL site (temperature, precipitation, etc...). Biochar's effect on soil hydraulic properties was measured by the HYPROP and WP4C from METER group. Palouse silt loam soil samples were mixed with two types of biochar, Redwood Sawdust (RSD) and Wheat Straw (WS), at concentrations of 4% and 7% by mass. The HYPROP and WP4C measure the key soil points along the water retention curve, as well as extrapolate the water retention curve in its entirety. These values are presented in a table in the 5-cell model. Changing the soil properties for each of the cells allows for the application of different biochar amendments (both type and concentration). Furthermore, the model can examine two different soil profiles, restricted and non-restricted layers. This is achieved by changing the K_sub values for either more or less restrictive. 

The key purpose of this research and model is to provide baseline modeling work to analyze how biochar affects soil properties. Additionally, there is a benefit in the flexibility of the model due to it being rooted by experimental data. This allows for various soil and biochar types to be analyzed as long Van Genuchten parameters and key soil properties are known.
DOI: 10.17632/s4twhx5hnp.1
title: Dataset of In Vitro Antimicrobial Activity of Different Irrigation Solutions Against Enterococcus Feacalis and Candida Albicans 

description:   It is known that one of the most important factors affecting the success of endodontic treatment is the elimination of microorganisms and toxic by-products from the root canal system . Usually, there is more than one microorganism in endodontic infections. The microorganisms found in unsuccessful root canal treatment cases and the microorganisms that play a role in primary endodontic infections are different from each other . Gram-negative, black-pigmented anaerobic bacteria are responsible for primary endodontic infections, while gram-positive steptococci, especially E. feacalis and C. albicans, are responsible for unsuccessful root canal treatments or persistent endodontic infection. All test solutions were found to be successful when compared with sterile distilled water used as a control group. It was also observed that solutions containing chlorhexidine gluconate formed a wider antimicrobial area. It was suggested that the use of these irrigation solutions in the clinic will increase the success of root canal treatment, but it should not be forgotten that these values obtained by direct contact will differ considering the complex structure of root canal anatomy and dentin tissue.
DOI: 10.17632/kksw3jprdm.1
title:  A study of Lirong Xu. CLOCK regulates Drp1 mRNA stability and mitochondrial homeostasis by interacting with PUF60

description: These western blot images support our research named 'CLOCK regulates Drp1 mRNA stability and mitochondrial homeostasis by interacting with PUF60'. In this research, we found that mitochondria of ClockΔ19 mice exhibit excessive fission and significant dysfunction. We also discovered that CLOCK binds to the RNA binding protein PUF60 RRM domain specifically through its EXON 19. Further, we found that PUF60 directly maintains mitochondrial homeostasis through regulating Drp1 mRNA stability, which could be competed by CLOCK protein.
DOI: 10.17632/kmg9s6t684.1
title: A study of Siling Wang et al

description: Three SARS-CoV-2 antibodies provide broad and synergistic neutralization against variants of concern, including Omicron
DOI: 10.15139/s3/u9w12w
title: POLI 784 Final Project

description: This data repository contains the data and R code for POLI 784 Final Project.
DOI: 10.17632/3n3v9xfv72.1
title: Long-term outcomes of high-risk basal cell carcinomas treated with Mohs micrographic surgery

description: Supplementary Table I
DOI: 10.17632/r7zf2rxmgh.1
title: Psoriasis induced by immune checkpoint inhibitors: a systematic review:Supplementary

description: Supplementary Tables
DOI: 10.17632/wxk92rfnmc.1
title: Signatures of selection reveals candidate genes associated with milk production trait in Guanzhong dairy goats

description: Supplementary Files of manuscript: “Signatures of selection reveals candidate genes associated with milk production trait in Guanzhong dairy goats”
DOI: 10.17632/h5f6hk2m7k.1
title: LINF_260020500

description: trifunctional enzyme alpha subunit
Leishmania infantum (strain JPCM5)
DOI: 10.17632/z9spt44fcv.1
title: LINF_260020400

description: Glutaredoxin
Leishmania infantum (strain JPCM5)
DOI: 10.17632/525gnb9gnb.1
title: LINF_260020300

description: RNA-binding protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/t8ds936hzv.1
title: LINF_260019950

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/c3tn9hyfvb.1
title: ECCPA: Calculation of classical and quantum cross sections for elastic collisions of charged particles with atoms

description: The Fortran program ECCPA calculates differential and integrated cross sections for elastic collisions of charged particles with atoms by using the classical-trajectory method and several quantum methods and approximations. The collisions are described within the framework of the static-field approximation, with the interaction between the projectile and the target atom represented by the Coulomb potential of the atomic nucleus screened by the atomic electrons. To allow the use of fast and robust calculation methods, the interaction is assumed to be the same in the center-of-mass frame and in the laboratory frame. Although this assumption neglects the effect of relativity on the interaction, it allows using strict relativistic kinematics. The equation of the relative motion in the center-of-mass frame is shown to have the same form as in the non-relativistic theory, with a relativistic reduced mass and an effective potential. The wave equation for the relative motion, as obtained from the correspondence principle, is formally identical to the non-relativistic Schrödinger equation with the reduced mass and the effective potential, and it reduces to the familiar Klein-Gordon equation when the mass of the target atom is much larger than that of the projectile. Collisions of spin 1/2 projectiles are also described by solving the Dirac wave equation. Various approximate solution methods are described and applied to a generic potential represented as a sum of Yukawa terms, which allows a good part of the calculations to be performed analytically. The program ECCPA is useful for assessing the validity and the relative accuracy of the various approximations, and as a pedagogical tool.
DOI: 10.17632/rtxbxssp5t.1
title: Electronic Supplementary Information-"Systematic QSAR and iQCCR Modelling of Fused/Non-Fused Aromatic Hydrocarbons (FNFAHs) Carcinogenicity to Rodents: Reduce Unnecessary Chemical Synthesis and Animal Testing"

description: Electronic Supplementary Information-1-2-3-4-"Systematic QSAR and iQCCR Modelling of Fused/Non-Fused Aromatic Hydrocarbons (FNFAHs) Carcinogenicity to Rodents: Reduce Unnecessary Chemical Synthesis and Animal Testing"
DOI: 10.17632/tx2g9bchkn.1
title: LINF_260019800

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/59pw7pvkkb.1
title: PyCSP: A Python package for the analysis and simplification of chemically reacting systems based on Computational Singular Perturbation

description: PyCSP is a Python package for the analysis and simplification of chemically reacting systems, using algorithms based on the Computational Singular Perturbation (CSP) theory. It provides tools for the local characterization of the chemical dynamics, enabled by the recognition of a convenient projection basis which carries out a timescale-based uncoupling. The tools supplied within the package allow one to identify the rate-controlling chemical reactions, the intrinsic chemical timescales, the driving chemical timescale and indicators of the system's explosive or dissipative propensity. Possible applications are the analysis of numerical simulations of reacting flows, and the reduction of chemical kinetics models, based on the CSP information. This manuscript provides a brief overview of the foundations of CSP, a description of the libraries, and demonstrations of the features implemented in PyCSP with code examples, along with practical advices and guidelines for users.
DOI: 10.17632/p4kc3dyzyh.1
title: LINF_260022400

description: protein kinase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/jhncjr6zhx.1
title: LINF_260022200

description: cytochrome c oxidase subunit V
Leishmania infantum (strain JPCM5)
DOI: 10.17632/wmkj639dyj.1
title: LINF_260021100

description: Proline dehydrogenase | PRODH
Leishmania infantum (strain JPCM5)
DOI: 10.17632/7ktf55h78s.1
title: Paired test showing difference in fin area measurements between fish

description: Paired test showing difference in fin area measurements between fish
DOI: 10.17632/vsgdgk5kyb.1
title: LINF_260020700

description: thimet oligopeptidase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/43x8637vfg.1
title: VIG Live Blackjack Hand Totals

description: 720 shoes of sampled data from Visionary iGaming Live Dealer Blackjack, rank counts additive, one row is one shoe. Includes count of "positive" and "negative" cards, and the net total.
DOI: 10.17632/2mvpr7vdb3.2
title: Scenario-Based Predictions of Urban Dynamics in Île-de-France Region

description: Data: 
Scenario-Based Predictions of Urban Dynamics in Île-de-France Region: A New Combinatory Methodologic approach of Variance analysis and Frequency Ratio
DOI: 10.17632/dhfh83pm2m.1
title: Supplementary Data 2

description: Statistical analyses of re-RBD human serum IgG binding ELISA test
DOI: 10.17632/pxd29hmhmz.1
title: Effect of vibration therapy on upper limb function in stroke patients. A Systematic Review and Meta- Analysis

description: Aim of the study:To systematically review and to perform meta- analysis of all the available literature stating the effects of vibration therapy on the improvement of upper limb function in stroke.
This systematic review and meta-analysis was conducted to review all the available literature used vibration therapy to improve upper limb function following stroke.
Methods:  A literature search conducted through Pub Med; Ovid articles published from 2000 onwards. To search the database, the following keywords were used: "vibration, "AND" upper limb function "AND" stroke" AND "rehabilitation." Articles were included if they received a 5/10 rating on Pedro's scale. Fugyl-Meyer outcome was chosen as a common measure for all investigations since it was meant to be used for patients with post-stroke hemiplegia patients of various ages. The RevMan version 5.4 software was used to conduct the meta-analysis. To examine heterogeneity, Higgins I2 and Chi-square (Tau2) statistical tests were   utilised.
Results: Out of all 45 studies initially, only seven studies were included for systematic review and five studies were included for meta- analysis. In stroke patients, significant improvement found after Vibration intervention, The meta-analysis found an increase in FMA with large effect size (0.75) (SMD 0.12, 95%CI -0.19 to 0.43, n=80) and moderate heterogenetiy (I2 = 37%  ) after intervention when compared with the control group. 
Conclusions: Vibration therapy is effective for improving upper limb function.
DOI: 10.17632/d57kt6kssw.1
title: Normative reference value of abdominal core strength in normal weight, overweight and obese asymptomatic young adults: A cross sectional study

description: Aim: The aim of this study was to find the normative value of abdominal core muscles strength in asymptomatic young adults with different Body Mass Index (BMI).
Method: A cross sectional study was performed among individual asymptomatic young adults with age group of 18 to 35 years, both male and female participants who met inclusion was enrolled in this study. To assess the strength of the abdominal core muscle (Transverse Abdominis and Multifidus) Pressure Biofeedback Unit (PBU) was used under the guidance of diagnostic ultrasound for determining the isolated contraction of the Transverse Abdominis and Multifidus.
Results: The normality of demographic data and outcome variables were determined by using Shapiro- Wilk test as the sample size is 47 (p-value ≥ 0.05). Further Kruskal-Wallis test was applied for between-group comparison as most of the normality was not normally distributed.
DOI: 10.17632/c6ggnjmvwx.1
title: Original figures of western blotting

description: Original figures of western blotting for transformming dedifferentiated indcued pluripotent stem cells derived-RPE cells into induced RPE cells
DOI: 10.17632/4jtfprbf5s.1
title: Patriotism and nationalism in explaining trust

description: The present study was designed to deepen the understanding of national identity as a predictor of political trust. The concept of national identity was subdivided into nationalism and patriotism. A representative survey of the Latvian population (N=1,000) studied predictors of trust (patriotism, nationalism, internal political efficacy, political cynicism, and life satisfaction) in the political system. The results show that trust in the political system can be predicted by patriotic attitudes (positively), nationalistic attitudes (negatively), internal political efficacy (positively), and low levels of political cynicism.
DOI: 10.17632/58w2wx93xk.1
title: Intestinal ELF4 Deletion Exacerbates Alcoholic Liver Disease by Disrupting Gut Homeostasis

description: Alcohol liver disease (ALD) is characterized by intestinal barrier disruption and gut dysbiosis. Dysfunction of E74 like ETS transcription factor 4 (ELF4) leads to colitis. We aimed to test the hypothesis that intestinal ELF4 plays a critical role in maintaining the normal function of intestinal barrier and gut homeostasis in a mouse model of ALD.
Wide type (WT) and Intestinal epithelial specific ELF4 knockout (Elf4-/-) mice were pair-fed the Lieber-DeCarli liquid diet containing 5% (w/v) alcohol or isocaloric maltose dextrin for 21 days. Serum levels of triglyceride (TG), the alanine aminotransferase (ALT) and aspartate transaminase (AST) were determined. RNA-Seq was used to quantify the gene expression of livers. Fecal microbiota was assessed with 16s rRNA sequencing. And fecal metabolite profiles were quantified with ultrahigh performance liquid chromatography coupled with mass spectrometry (UHPLC-MS/MS).
Intestinal ELF4 deficiency resulted in dysfunction of the intestinal barrier. Tight junction associated genes including TJP1 and OCLN had decreased expression in both Elf4-/- mice and ELF4-/- CACO2 cells. Elf4-/- mice exhibited gut microbiota (GM) dysbiosis with the characteristic of a larger proportion of Proteobacteria. The LPS increased in Elf4-/- mice and was the most important differential metabolite between Elf4-/- mice and WT mice. What’s more, an increase in the phylum Proteobacteria was positively correlated with higher LPS levels. Alcohol exposure increased liver-to-body weight ratio, and hepatic inflammation response and steatosis in WT mice. These deleterious effects were exaggerated in Elf4-/- mice. Alcohol feeding significantly increased serum levels of TG, ALT and AST in Elf4-/- mice but not in WT mice. Alcohol feeding decreased the Tjp1 mRNA expression, which was further exacerbated by ELF4 deletion. In addition, alcohol exposure resulted in enriched expression of genes associated with cholesterol metabolism and lipid metabolism in livers from Elf4-/- mice. 16S rRNA sequencing showed a decrease abundance of Akkermansia and Bilophila in Elf4-/- mice. In conclusion, intestinal ELF4 is an important host protective factor in maintaining gut homeostasis and alleviating alcohol exposure-induced hepatic steatosis and injury.
DOI: 10.17632/9pz8ssmc49.2
title: ToxLex_bn: A Curated Dataset of Bangla Toxic Language Derived from Facebook Comment 

description: ToxLex or Lexicon of toxic language is a dataset having the aggressive and abusive bad words used in social media, Specifically, this dataset contains utterances from the user-generated comments of Facebook. The texts cover the demographic and thematic distribution of Bangla's toxic language on social media. The data have been extracted from 8 publicly open Facebook pages. This dataset is a curated, de-duplicated, anonymized dataset that is derived from raw comments. The dataset contains 1959 rows with 08 columns and each row represents a toxic bigram with its corresponding features such as transcriptions, translation, spelling standards, and degree of toxicity. This dataset is single human-annotated and curated to define classifiers for toxic language detection systems. Apart from this, it is considered a wordlist having Bangla cyberbullying, hate speech, and slang.

Warning: this dataset contains text content that may be distressing or upsetting.
DOI: 10.17632/3cdsnmhx45.1
title: Reliability and adaptability of Hindi version of Lower Extremity Motor Coordination Test

description: Hypothesis of the study: The LEMOCOT test may or may not be reliable and adaptable to examine the coordination in subjects.
Two bilingual independent translators and two blinded physiotherapists performed forward and backward translations in accordance with international criteria. Following these procedures, an aught of the pre-final Hindi version of BBS was created, and the validated version of H-BBS through ten expert phases of content validation via the Google form approach. After recruiting 30 patients, the adaptability of the validated version was further examined. Thirty patients took part in the study, which aimed to examine the H-BBS' psychometric properties (Intra-evaluator reliability).
The total content validation index of the H-LEMOCOT was 0.967, which was excellent. The intra-evaluator dependability of each domain and the computed score connected to the H-LEMOCOT as ICC values is 0.967, showing excellent reliability. All of the internal consistency was tested using Cronbach's alpha, which was 0.967, showing high internal consistency.
At the end it was concluded that H- LEMOCOT demonstrated excellent reliability and validity when used to treat a variety of neurological illnesses
DOI: 10.17632/crvr5ydr4c.1
title: Setting the Research Agenda for Clinical Artificial Intelligence in Pancreatic Ductal Adenocarcinoma Imaging. Schuurmans and Alves et al. 

description: This export contains all literature used for the review 'Setting the Research Agenda for Clinical Artificial Intelligence in Pancreatic Ductal Adenocarcinoma Imaging' by Schuurmans and Alves et al.
DOI: 10.17632/zznkw373b5.1
title: LINF_260023000

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/s4g34jzgjh.1
title: Consumo de sustancias psicoactivas en adolescentes dominicanos y otras variables relacionadas

description: Evaluation of the consumption of alcohol and other psychoactive substances in Dominican adolescents.
DOI: 10.17632/vnfm2mv55x.1
title: Ultrasound-assisted extraction of active compounds of Beta vulgaris

description: Deep eutectic solvents (DES) are emerging as green and sustainable solvents for the efficient extraction of bioactive compounds and with that have increasingly attracted attention as environmentally friendly alternatives of traditional organic solvents. In this study, aimed to investigate the application of ultrasound in the extraction of betanin from beets (Beta vulgaris) with DES.
DOI: 10.17632/scs64fxr4d.2
title: Data Figure2_EC50_Monoclonal antibodies binding data for SARS-CoV-2 proteins

description: Data for figure 2.
Data were processed.  Data points and the fitting points were included in the raw data in excel format.  The data were fit to standard four-parameter logistic equations using GraphPad Prism (GraphPad Software, La Jolla, CA).
DOI: 10.17632/w77g7vdsjp.2
title: The Natural Chemotherapeutic Capsaicin Activates AMPK through LKB1 Kinase and TRPV1 Receptors in Prostate Cancer Cells

description: Analysis and data used to generate graphs in the figures 1-7
DOI: 10.3886/e113772v1-116440
title: Replication data for: Minimum Wages and Firm Profitability

description: We study the impact of minimum wages on firm profitability, exploiting the changes induced by the introduction of a UK national minimum wage in 1999. We use pre-policy information on the distribution of wages to implement a difference-in-differences approach. Minimum wages raise wages, but also significantly reduce profitability (especially in industries with relatively high market power). This is consistent with a simple model where wage gains from minimum wages map directly into profit reductions. There is some suggestive evidence of longer run adjustment to the minimum wage through falls in net entry rates. (JEL J31, J38, L25)
DOI: 10.17632/yhjnbnsgz3.1
title: Generation of a mitochondrial protein compendium in Dictyostelium discoideum

description: The data file contains 10 original microscopy image files, Related to Figure 3, and 10 excel files (Supplemental Tables 1-10).

Supplemental Table descriptions:
Table S1. D. discoideum homologs of human mitochondrial proteins, Related to Figure 1.
Table S2. Proteomic discovery relative enrichments and relative enrichment ratios, Related to Figure 1. 
Table S3. Proteomic discovery core mitochondrial proteins, Related to Figure 2. 
Table S4. Predicted probabilities of mitochondrial localization based on GMM, Related to Figure 2. 
Table S5. Proteomic discovery mitochondrial targeting sequence prediction, Related to Figure 2. 
Table S6. Microscopy validation of relative enrichment ratio cutoff, Related to Figure 3. 
Table S7. Classifications of the mitochondrial protein compendium, Related to Tables 1 and 2.
Table S8. All ribosomal proteins in the mitochondrial protein compendium, Related to Table 2.
Table S9. Expression profiles for genes encoding mitochondrial proteins, Related to Figure 4.  
Table S10. List of oligos used for cloning, Related to Figure 3.
DOI: 10.17632/4xsbn3svvc.1
title: Effect of vibration therapy on upper limb function in stroke patients.

description: Effect of vibration therapy will be on upper limb function in stroke patients. Out of all 45 studies initially, only seven studies were included for systematic review and five studies were included for meta- analysis. In stroke patients, significant improvement found after Vibration intervention, The meta-analysis found an increase in FMA with large effect size (0.75) (SMD 0.12, 95%CI -0.19 to 0.43, n=80) and moderate heterogenetiy (I2 = 37%  ) after intervention when compared with the control group.
DOI: 10.17632/gxtcx8rn3w.1
title: Supplementary data for "Essential amino acid profile of supplemental metabolizable protein affects mammary gland metabolism and whole-body glucose kinetics in dairy cattle" by Nichols et al.

description: Supplementary material for "Essential amino acid profile of supplemental metabolizable protein affects mammary gland metabolism and whole-body glucose kinetics in dairy cattle" by Nichols et al. including Supplementary Table S1, S2, and S3.
DOI: 10.17632/8j3tf5zfd9.4
title: First time Offender Data

description: This is the raw data gathered from different prisons of Jharkhand India. The data consists of Behavior data analysis of  Criminals who got convicted once. A detailed description is given in the manuscript related to it.