cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/3fbmvp6swp.1
title: Supplementary Figures and Tables

description: Legends for Figures Supplementary Fig 1. Gene Ontology analysis enrichment analysis for the top 32 genes with alterations in seven or more cases. Plots of -log10 (p-values) are described, and the terms with p-values less than 0.01 are shown. Supplementary Fig 2. Correlation between altered genes and metastatic sites. Plots of -log10 (p-values) versus log2 (Odds ratios) are shown. Gene names with p-values less than 0.1 are displayed. 71 patients with available metastatic data were analyzed. Fisher's exact test was used to determine the correlation between bone, liver or lung metastasis and the top 99 genes with alterations in four or more cases. Odds ratios were evaluated with Haldane-Anscombe correction, which added 0.5 to each cell count to avoid calculation errors with a cell count of zero. Supplementary Fig 3. Lollipop plots of ERBB2, ERBB3, and TP53 showing the frequency of mutations in our EMPD cohort. Oncogenic mutations are written in red letters. The number of green circles represents the number of cases with each mutation.
DOI: 10.18167/dvn1/e4x5vd
title: Measurement of arsenic levels in the leaves and seeds of a panel of 300 japonica varieties and GBS genotyping of 228 of them

description: A measurement of arsenic levels in the leaves and seeds of a panel of 300 japonica rice varieties was carried out in 2014 in Camargue, France. With the aim of testing genomic prediction, GBS genotyping (ApekI enzyme) of 228 of them was also done.
DOI: 10.48510/fk2/mxtyhm
title: The prevalence and risk factors of self-reported hand eczema in health care versus non-health care workers during the COVID-19 pandemic in Latvia

description: Data were collected to investigate skincare habits and hand hygiene and to pinpoint the factors that could impact the occurrence of hand eczema, considering the adoption of novel hand hygiene practises and the diverse range of hand hygiene methods used throughout the COVID-19 pandemic. Data were collected via Google Forms questionnaire in Latvian language, which was distributed electronically between January 1 and 30 April 2023, via social media (Facebook, Instagram) and social media application (WhatsApp) to the general population. The study included adults aged greater than or equal to 18 years. The study included both – participants from the general population of Latvia and HCWs. Statistical analysis of data was done using SPSS (Statistical Package for Social Sciences) for Windows version 27.0 and Microsoft Excel – 2016.
DOI: 10.25345/c5nv99n2n
title: MassIVE MSV000093580 - Detection of 187AA by mass spectrometry
title: Identification of 187AA unique peptides by mass spectrometry and detection of 187AA by mass spectrometry in eight human cells (GZF2-iPSC, GZF2-hep, 293T, SK-hep1, ESC-derived cardiomyocytes, Hep-G2, QSG-7701 and Hela).
DOI: 10.5281/zenodo.10275750
title: mOTUs3 - genome metadata

description: A tab-delimited file listing genomes used in mOTUs3 with metadata that map each genome to a mOTU and provide additional information such as: the data source, quality metrics and download links. Genome sequence files can be programmatically downloaded with a tool available at: https://github.com/motu-tool/motus_v3_genomes.
 
GENOME                     Genome name 
MOTU                       Assigned mOTU 
GENOME_SOURCE              progenomes2.0 or extension 
MGS_ADDED                  Were MGs from this genome added to the database? 
CHECKM_COMPLETENESS        CheckM v1 completeness score 
CHECKM_CONTAMINATION       CheckM v1 contamination score GUNC_PROGENOMES2.1        
 GUNC result using the progenomes 2.1 database 
ANVIO_COMPLETENES          ANVIO v7.1 completeness score 
ANVIO_CONTAMINATION        ANVIO v7.1 contamination score 
GTDB-R207                  GTDB classification using the database release R207 
ENVIRONMENT                Source environment of genomes. Retrieved either from progenomes2.0 or from the associated biosample description 
DOWNLOAD_LINK              Link to file containing genomes (one file per mOTU) DOWNLOAD_MD5               MD5 sum of the file ORIGINAL_DOWNLOAD_LINK     Link to original genome if available
DOI: 10.5281/zenodo.6975139
title: Mapping of genomes to mOTUs

description: A map between the genomes whose marker genes make up the mOTUs database and their associated mOTUs identfier: e.g.: <pre><code>651561.SAMN05366337 ref_mOTU_v3_00012 KERN20-1_SAMEA6240065_METAG_000058 ref_mOTU_v3_00012 1500294.SAMN02787088 ref_mOTU_v3_00013 1500296.SAMN02787114 ref_mOTU_v3_00013 1500292.SAMN02787095 ref_mOTU_v3_00014 1500282.SAMN02787106 ref_mOTU_v3_00015 1813611.SAMN04544318 ref_mOTU_v3_00015 253.SAMN06130963 ref_mOTU_v3_00015 1500295.SAMN02787075 ref_mOTU_v3_00016</code></pre>
DOI: 10.5281/zenodo.6975138
title: mOTUs3 - genome metadata

description: A tab-delimited file listing genomes used in mOTUs3 with metadata that map each genome to a mOTU and provide additional information such as: the data source, quality metrics and download links. Genome sequence files can be programmatically downloaded with a tool available at: https://github.com/motu-tool/motus_v3_genomes.
 
GENOME                     Genome name 
MOTU                       Assigned mOTU 
GENOME_SOURCE              progenomes2.0 or extension 
MGS_ADDED                  Were MGs from this genome added to the database? 
CHECKM_COMPLETENESS        CheckM v1 completeness score 
CHECKM_CONTAMINATION       CheckM v1 contamination score GUNC_PROGENOMES2.1        
 GUNC result using the progenomes 2.1 database 
ANVIO_COMPLETENES          ANVIO v7.1 completeness score 
ANVIO_CONTAMINATION        ANVIO v7.1 contamination score 
GTDB-R207                  GTDB classification using the database release R207 
ENVIRONMENT                Source environment of genomes. Retrieved either from progenomes2.0 or from the associated biosample description 
DOWNLOAD_LINK              Link to file containing genomes (one file per mOTU) DOWNLOAD_MD5               MD5 sum of the file ORIGINAL_DOWNLOAD_LINK     Link to original genome if available
DOI: 10.5281/zenodo.7146984
title: mOTUs3 - genome metadata

description: <pre>A tab-delimited file listing genomes used in mOTUs3 with metadata that map each genome to a mOTU and provide additional information such as: the data source, quality metrics and download links. Genome sequence files can be programmatically downloaded with a tool available at: https://github.com/motu-tool/motus_v3_genomes.</pre> <pre><code class="language-bash">GENOME Genome name MOTU Assigned mOTU GENOME_SOURCE progenomes2.0 or extension MGS_ADDED Were MGs from this genome added to the database? CHECKM_COMPLETENESS CheckM v1 completeness score CHECKM_CONTAMINATION CheckM v1 contamination score GUNC_PROGENOMES2.1 GUNC result using the progenomes 2.1 database ANVIO_COMPLETENES ANVIO v7.1 completeness score ANVIO_CONTAMINATION ANVIO v7.1 contamination score GTDB-R207 GTDB classification using the database release R207 ENVIRONMENT Source environment of genomes. Retrieved either from progenomes2.0 or from the associated biosample description DOWNLOAD_LINK Link to file containing genomes (one file per mOTU) DOWNLOAD_MD5 MD5 sum of the file ORIGINAL_DOWNLOAD_LINK Link to original genome if available </code></pre>
DOI: 10.15151/esrf-es-1423663718
title: High energy X-ray propagation based phase contrast imaging of multiphase carbon steels

description: Testing contrast and propagation distances required to resolve martensitic phase from austenitic phase within the steel microstructure. Tomography will be running until the following MDT.
DOI: 10.15151/esrf-es-1427249306
title: Ex-situ hydrogen electrolyzer materials

description: Ex-situ hydrogen electrolyzer materials
DOI: 10.15151/esrf-es-1362353346
title: Self-assembly study of mixtures of biosurfactants with conventional surfactants

description: Surfactants manufacturers are actively working on replacing, partially or totally, synthetic oil-based surfactants with biobased surfactants (BS) in consumer goods, for BS are established as being less toxic, with better environmental compatibility and produced from renewable feedstock. However, home and personal care products still require surfactants formulation, optimized to obtain high-performance products. A fundamental understanding in the self-assembly properties of blends of biosurfactants with industrial surfactants is then necessary. In this proposal, we use a high throughput SAXS beamline to study the phase diagram in water under diluted conditions (&lt; 5 wt%) for mixtures of biosurfactants (sophoro-, rhamno-, cellobiose-, gluco-lipids) with industrial surfactants, negative/positive/neutral (SDS, LAS, CTAB, Pluronic P123, F127). This study will be essential for understanding BS/surfactant blends and sketch their use in commercial formulations in the field of personal care.
DOI: 10.15151/esrf-es-1423688844
title: Substitution and strain effect on the magnetism of high-entropy oxides

description: High-entropy oxides are materials characterized by the intricate magnetic ground state arising from the presence of multiple transition metals and magnetic atoms. We intend to measure XMCD of single crystal perovskite thin films of Nd(Cr0.2Mn0.2Fe0.2Co0.2Ni0.2)O3 and Nd0.7Ca0.3(Cr0.2Mn0.2Fe0.2Co0.2Ni0.2)O3, grown on LaAlO3 substrates to induce strain. The samples are characterized for the composition and XRD was used to probe the film thickness. Muon spectroscopy was performed at PSI, Switzerland, while previous XMCD were measured at KIT Light Source, Germany. The incorporation of Ca is observed to enhance the magnetic response of Ni and Fe, with a concomitant reduction in the Co signal. To comprehensively characterize the magnetic behavior, XMCD hysteresis will be measured at the transition metal L3 edges. The results will help to understand the complex magnetic ground state of these high-entropy oxide materials.
DOI: 10.15151/esrf-es-1398910582
title: Probing the crystalline phase differences between pristine and electrically-cycled HZO films in ferroelectric tunnel junctions

description: We want to use scanning diffraction to map the distribution of crystalline phases (non-ferroelectric monoclinic and ferroelectric orthorhombic) in 10 nm Hf0.5Zr0.5O2 thin films integrated in ferroelectric tunnel junctions and investigate how they change upon electrical cycling. The eventual variation of crystal structure in the films upon wake-up electrical cycling and after longer time operation will be investigated by comparing measurements of samples in the pristine state and after ex-situ electrical cycling.
DOI: 10.15151/esrf-es-1361434639
title: Understanding the microstructural origin of high voltage instability in high-Ni NMC cathodes

description: To meet the rapid goals of electrification of the transport sector, it is imperative to build batteries that have a higher capacity, and are resilient and safe. One of the popular ways of achieving this is by using high Ni NMC (LiNixMnyCo1-x-yO2) cathodes, at higher voltages. This is achieved by substituting Ni for Co in the NMC material. However, this higher capacity per cycle comes at the cost of cycling stability. Particularly when accessing high voltages, these materials are prone to cracking. Therefore, in order to improve the stability of low-Co/high-Ni NMCs, we aim to systematically study the underlying mechanism for this high voltage morphological instability. Specifically, we aim to conduct experiments of polycrystal and single crystal NMCs with varying Ni content, to better understand the role of inter-granular anisotropy in causing high voltage instabilities in high Ni NMCs.
DOI: 10.15151/esrf-es-1357833428
title: Unveiling the properties of Warm Dense Matter copper by means of laser-driven shock compression coupled to time-resolved XAS

description: The Warm Dense Matter (WDM) state is an “exotic” state of matter which shows densities typical of solids and temperatures typical of plasmas. A theoretical description of WDM is far from being achieved since conventional approximations that apply to solids or plasmas fail for such complex state and experimental data are scarce. WDM states are encountered in the inner cores of giant planets and also in the compression stage towards the inertial confinement fusion. First Light Fusion is a company leader in inertial confinement fusion research and they are interested in characterizing the properties of high-Z metals up to dynamic multi-Mbar conditions, as these metals are used for the implosion capsules or for the impactor. We propose here to use ns time resolved X-ray Absorption Spectroscopy (XAS) to characterize the properties of WDM Copper subjected to high-power laser shock and release by means of High Power Laser Facility. The results will be compared to ab initio MD simulations.
DOI: 10.15151/esrf-es-1357833561
title: Se Kalpha HERFD XAS/EXAFS and VtC XES of Se-incorporated Nitrogenase intermediates

description: Nitrogenase, the only natural enzyme to reduce nitrogen to ammonia. In the nitrogenase catalytic cycle, H+/e- are sequentially delivered to its active site, however open questions exist as to the specific sites of these protonation steps. The probable sites are thought to be the bridging sulfides and the iron centres. Recently researchers were successful in selectively replacing the sulfide bridges within the FeMoco active site by Se, which provides a selective spectroscopic handle, allowing the bridging Se to serve as a unique spectator for the two irons it interacts with and thus enabling protonation at the Se and/or Fe in different intermediates to be experimentally probed. Herein, we intend to pursue selenium Kalpha HERFD XAS, together with EXAFS and Se valence to core X-ray emission spectroscopy (VtC XES) in order to obtain electronic and geometric structural insights into the changes that occur at the FeMo-co active site of molybdenum nitrogenase.
DOI: 10.5517/ccdc.csd.cc2gs2t5
title: CCDC 2287267: Experimental Crystal Structure Determination

description: Related Article: J.C. Bear, N. Terzoudis, J.K. Cockcroft|2023|IUCrJ|10|720|doi:10.1107/S2052252523008163
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h2x6q
title: CCDC 2296703: Experimental Crystal Structure Determination

description: Related Article: Christoph J. Vonnemann, David Bulfield, Elric Engelage, Stefan M. Huber|2023|Org.Chem.Front.|10|6146|doi:10.1039/D3QO01593A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h2x7r
title: CCDC 2296704: Experimental Crystal Structure Determination

description: Related Article: Christoph J. Vonnemann, David Bulfield, Elric Engelage, Stefan M. Huber|2023|Org.Chem.Front.|10|6146|doi:10.1039/D3QO01593A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h2x8s
title: CCDC 2296705: Experimental Crystal Structure Determination

description: Related Article: Christoph J. Vonnemann, David Bulfield, Elric Engelage, Stefan M. Huber|2023|Org.Chem.Front.|10|6146|doi:10.1039/D3QO01593A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h4d57
title: CCDC 2298128: Experimental Crystal Structure Determination

description: Related Article: zhou zhiqi|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gkrzs
title: CCDC 2281196: Experimental Crystal Structure Determination

description: Related Article: Fagner da Silva Moura, Ygor S. Sobrinho, Carolina Stellet, Jilder D. P. Serna, Carolina B. P. Ligiero, Maurício I. Yoguim, Daphne S. Cukierman, Renata Diniz, Odivaldo C. Alves, Nelson H. Morgon, Aguinaldo R. de Souza, Nicolás A. Rey|2023|Dalton Trans.|52|17731|doi:10.1039/D3DT02597G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h29ws
title: CCDC 2296135: Experimental Crystal Structure Determination

description: Related Article: Haina Zhang, Lingyu Wang, Wenjing Guo, Hu Cai, Zhenhong Wei|2023|Chem.Commun.|59|13442|doi:10.1039/D3CC04700H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2czw08
title: CCDC 2204410: Experimental Crystal Structure Determination

description: Related Article: Naushad Ahmed, Prem Prakash Sahu|2023|CrystEngComm|25|6592|doi:10.1039/D3CE00827D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2czw19
title: CCDC 2204411: Experimental Crystal Structure Determination

description: Related Article: Naushad Ahmed, Prem Prakash Sahu|2023|CrystEngComm|25|6592|doi:10.1039/D3CE00827D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.5779417
title: Tailored deformation behavior of 304L stainless steel through control of the crystallographic texture with Laser-Powder Bed Fusion

description: Laser-powder bed fusion (L-PBF) has gained significant research interest, not only for its profound advantage of producing near-net shape complex geometries of metallic parts, but also for the possibility of producing tailored microstructures. Recent observations have shown that by adjusting the process parameters it is possible to manipulate the crystallographic texture, through the control of the geometrical features of the melt pool. It is also known that the deformation behavior, namely the transformation induced plasticity or twinning induced plasticity effects, of austenitic stainless steels are dependent on the crystallographic texture. Based on the aforementioned observations, the deformation behavior of austenitic stainless steels processed by L-PBF can be tailored. By adjusting the laser power and the laser scanning speed, tailored crystallographic textures were obtained, along the uniaxial loading direction in 304L stainless steel samples produced by L-PBF. The possibility to engineer the crystallographic textures and thus the deformation behavior, in metastable stainless steels, is demonstrated by performing in situ neutron diffraction and uniaxial tension and compression tests. The influence of the initial and the evolving crystallographic texture on the deformation behavior is demonstrated and elaborated accordingly. The observed asymmetry in the deformation behavior between tension and compression is also discussed in detail.
DOI: 10.5281/zenodo.5779418
title: Tailored deformation behavior of 304L stainless steel through control of the crystallographic texture with Laser-Powder Bed Fusion

description: Laser-powder bed fusion (L-PBF) has gained significant research interest, not only for its profound advantage of producing near-net shape complex geometries of metallic parts, but also for the possibility of producing tailored microstructures. Recent observations have shown that by adjusting the process parameters it is possible to manipulate the crystallographic texture, through the control of the geometrical features of the melt pool. It is also known that the deformation behavior, namely the transformation induced plasticity or twinning induced plasticity effects, of austenitic stainless steels are dependent on the crystallographic texture. Based on the aforementioned observations, the deformation behavior of austenitic stainless steels processed by L-PBF can be tailored. By adjusting the laser power and the laser scanning speed, tailored crystallographic textures were obtained, along the uniaxial loading direction in 304L stainless steel samples produced by L-PBF. The possibility to engineer the crystallographic textures and thus the deformation behavior, in metastable stainless steels, is demonstrated by performing in situ neutron diffraction and uniaxial tension and compression tests. The influence of the initial and the evolving crystallographic texture on the deformation behavior is demonstrated and elaborated accordingly. The observed asymmetry in the deformation behavior between tension and compression is also discussed in detail.