cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1463372.08fu
title: SH1463372.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1612001.08fu
title: SH1612001.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1612002.08fu
title: SH1612002.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1463373.08fu
title: SH1463373.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1463374.08fu
title: SH1463374.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1463375.08fu
title: SH1463375.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.21167893
title: MedLinker Models

description: . ├── [ 96] BERT │ └── [ 224] scibert_scivocab_uncased │ ├── [ 313] bert_config.json │ ├── [ 313] config.json │ ├── [422M] pytorch_model.bin │ ├── [223K] vocab.txt │ └── [391M] weights.tar.gz ├── [ 192] Classifiers │ ├── [162M] softmax.cui.h5 │ ├── [467K] softmax.cui.map │ ├── [216K] softmax.sty.h5 │ └── [ 293] softmax.sty.map ├── [ 96] ContextualNER │ └── [ 256] mm_st21pv_SCIBERT_uncased │ ├── [430M] best.th │ ├── [3.0K] config.json │ ├── [1.4K] metrics.json │ ├── [3.1M] stderr.log │ ├── [ 60M] stdout.log │ └── [ 160] vocabulary │ ├── [ 38] labels.txt │ ├── [ 14] non_padded_namespaces.txt │ └── [ 654] token_characters.txt ├── [ 96] ExactMatchNER │ └── [425M] umls.2017AA.active.st21pv.nerfed_nlp_and_matcher.max3.p ├── [ 192] SimString │ ├── [234M] umls.2017AA.active.full.aliases.3gram.5toks.db │ ├── [102M] umls.2017AA.active.full.aliases.5toks.map │ ├── [183M] umls.2017AA.active.st21pv.aliases.3gram.5toks.db │ └── [ 80M] umls.2017AA.active.st21pv.aliases.5toks.map ├── [ 160] VSMs │ ├── [127M] mm_st21pv.cuis.scibert_scivocab_uncased.vecs │ ├── [148K] mm_st21pv.sts_anns.scibert_scivocab_uncased.vecs │ └── [148K] mm_st21pv.sts_cpts.scibert_scivocab_uncased.vecs └── [ 256] Validators ├── [ 908] mm_st21pv.lr_clf_cui.dev.joblib ├── [ 908] mm_st21pv.lr_clf_cui.train.joblib ├── [ 908] mm_st21pv.lr_clf_cui.train2.joblib ├── [ 908] mm_st21pv.lr_clf_sty.dev.joblib ├── [ 908] mm_st21pv.lr_clf_sty.train.joblib └── [ 908] mm_st21pv.lr_clf_sty.train2.joblib <br> 10 directories, 31 files
DOI: 10.5281/zenodo.5717419
title: Supporting Data for pyCSEP: A Software Toolkit for Earthquake Forecast Developers

description: Contains data needed to reproduce the figures from the publication of pyCSEP: A Software Toolkit for Earthquake Forecast Developers. The data can be uncompressed using the following command: <pre><code class="language-bash">tar -xzvf pycsep_esrl_data.tar.gz</code></pre> After uncompressing, the data set contains the following files: data/<br> evaluation_catalog.json<br> evaluation_catalog_zechar2013_merge.txt<br> forecasts/<br> bird_liu.neokinema-fromXML.dat<br> ebel.aftershock.corrected-fromXML.dat<br> helmstetter_et_al.hkj.aftershock-fromXML.dat<br> lombardi.DBM.italy.5yr.2010-01-01.dat<br> meletti.MPS04.italy.5yr.2010-01-01.dat<br> werner.HiResSmoSeis-m1.italy.5yr.2010-01-01.dat<br> ucerf3_forecast/<br> config.json<br> m71_event.json<br> results_complete.bin
DOI: 10.5281/zenodo.5748242
title: Supporting Data for pyCSEP: A Software Toolkit for Earthquake Forecast Developers

description: Contains data needed to reproduce the figures from the publication of pyCSEP: A Software Toolkit for Earthquake Forecast Developers. The data can be uncompressed using the following command: <pre><code class="language-bash">tar -xzvf pycsep_esrl_data.tar.gz</code></pre> After uncompressing, the data set contains the following files: data/<br> evaluation_catalog.json<br> evaluation_catalog_zechar2013_merge.txt<br> SRL_2018031_esupp_Table_S1.txt<br> forecasts/<br> bird_liu.neokinema-fromXML.dat<br> ebel.aftershock.corrected-fromXML.dat<br> helmstetter_et_al.hkj.aftershock-fromXML.dat<br> lombardi.DBM.italy.5yr.2010-01-01.dat<br> meletti.MPS04.italy.5yr.2010-01-01.dat<br> werner.HiResSmoSeis-m1.italy.5yr.2010-01-01.dat<br> ucerf3_forecast/<br> config.json<br> m71_event.json<br> results_complete.bin
DOI: 10.5281/zenodo.5717418
title: Supporting Data for pyCSEP: A Software Toolkit for Earthquake Forecast Developers

description: Contains data needed to reproduce the figures from the publication of pyCSEP: A Software Toolkit for Earthquake Forecast Developers. <br> evaluation_catalog.json<br> evaluation_catalog_zechar2013_merge.txt<br> SRL_2018031_esupp_Table_S1.txt<br> <br> bird_liu.neokinema-fromXML.dat<br> ebel.aftershock.corrected-fromXML.dat<br> helmstetter_et_al.hkj.aftershock-fromXML.dat<br> lombardi.DBM.italy.5yr.2010-01-01.dat<br> meletti.MPS04.italy.5yr.2010-01-01.dat<br> werner.HiResSmoSeis-m1.italy.5yr.2010-01-01.dat<br> <br> config.json<br> m71_event.json<br> results_complete.bin
DOI: 10.5517/ccdc.csd.cc26qqvj
title: CCDC 2047638: Experimental Crystal Structure Determination

description: Related Article: Ruth Weller, Igor Müller, Carine Duhayon, Sylviane Sabo-Etienne, Sébastien Bontemps, C. Gunnar Werncke|2021|Dalton Trans.|50|4890|doi:10.1039/D1DT00121C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc278gzz
title: CCDC 2063731: Experimental Crystal Structure Determination

description: Related Article: Rafael. A. C. Souza, Waleska R. P. Costa, Eduardo F. Faria, Meliza A. de S. Bessa, Ralciane de P. Menezes, Carlos H. G. Martins, Victor M. Deflon, Carolina G. Oliveira|2021|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26qqxl
title: CCDC 2047640: Experimental Crystal Structure Determination

description: Related Article: Ruth Weller, Igor Müller, Carine Duhayon, Sylviane Sabo-Etienne, Sébastien Bontemps, C. Gunnar Werncke|2021|Dalton Trans.|50|4890|doi:10.1039/D1DT00121C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27f2pg
title: CCDC 2068155: Experimental Crystal Structure Determination

description: Related Article: Dan Tian, Tian-Tian Wu, Yan-Qing Liu, Na Li|2021|Inorg.Chem.|60|12067|doi:10.1021/acs.inorgchem.1c01260
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcrhz
title: CCDC 2156251: Experimental Crystal Structure Determination

description: Related Article: Akane Chishiro, Ippei Akioka, Akifumi Sumida, Kouki Oka, Norimitsu Tohnai, Takashi Yumura, Hiroaki Imoto, Kensuke Naka|2022|Dalton Trans.|51|13716|doi:10.1039/D2DT02145E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcrj0
title: CCDC 2156252: Experimental Crystal Structure Determination

description: Related Article: Akane Chishiro, Ippei Akioka, Akifumi Sumida, Kouki Oka, Norimitsu Tohnai, Takashi Yumura, Hiroaki Imoto, Kensuke Naka|2022|Dalton Trans.|51|13716|doi:10.1039/D2DT02145E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcrk1
title: CCDC 2156253: Experimental Crystal Structure Determination

description: Related Article: Akane Chishiro, Ippei Akioka, Akifumi Sumida, Kouki Oka, Norimitsu Tohnai, Takashi Yumura, Hiroaki Imoto, Kensuke Naka|2022|Dalton Trans.|51|13716|doi:10.1039/D2DT02145E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcrl2
title: CCDC 2156254: Experimental Crystal Structure Determination

description: Related Article: Akane Chishiro, Ippei Akioka, Akifumi Sumida, Kouki Oka, Norimitsu Tohnai, Takashi Yumura, Hiroaki Imoto, Kensuke Naka|2022|Dalton Trans.|51|13716|doi:10.1039/D2DT02145E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcrm3
title: CCDC 2156255: Experimental Crystal Structure Determination

description: Related Article: Akane Chishiro, Ippei Akioka, Akifumi Sumida, Kouki Oka, Norimitsu Tohnai, Takashi Yumura, Hiroaki Imoto, Kensuke Naka|2022|Dalton Trans.|51|13716|doi:10.1039/D2DT02145E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcrn4
title: CCDC 2156256: Experimental Crystal Structure Determination

description: Related Article: Akane Chishiro, Ippei Akioka, Akifumi Sumida, Kouki Oka, Norimitsu Tohnai, Takashi Yumura, Hiroaki Imoto, Kensuke Naka|2022|Dalton Trans.|51|13716|doi:10.1039/D2DT02145E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcrp5
title: CCDC 2156257: Experimental Crystal Structure Determination

description: Related Article: Akane Chishiro, Ippei Akioka, Akifumi Sumida, Kouki Oka, Norimitsu Tohnai, Takashi Yumura, Hiroaki Imoto, Kensuke Naka|2022|Dalton Trans.|51|13716|doi:10.1039/D2DT02145E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcrq6
title: CCDC 2156258: Experimental Crystal Structure Determination

description: Related Article: Akane Chishiro, Ippei Akioka, Akifumi Sumida, Kouki Oka, Norimitsu Tohnai, Takashi Yumura, Hiroaki Imoto, Kensuke Naka|2022|Dalton Trans.|51|13716|doi:10.1039/D2DT02145E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcrr7
title: CCDC 2156259: Experimental Crystal Structure Determination

description: Related Article: Akane Chishiro, Ippei Akioka, Akifumi Sumida, Kouki Oka, Norimitsu Tohnai, Takashi Yumura, Hiroaki Imoto, Kensuke Naka|2022|Dalton Trans.|51|13716|doi:10.1039/D2DT02145E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcrs8
title: CCDC 2156260: Experimental Crystal Structure Determination

description: Related Article: Akane Chishiro, Ippei Akioka, Akifumi Sumida, Kouki Oka, Norimitsu Tohnai, Takashi Yumura, Hiroaki Imoto, Kensuke Naka|2022|Dalton Trans.|51|13716|doi:10.1039/D2DT02145E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcrt9
title: CCDC 2156261: Experimental Crystal Structure Determination

description: Related Article: Akane Chishiro, Ippei Akioka, Akifumi Sumida, Kouki Oka, Norimitsu Tohnai, Takashi Yumura, Hiroaki Imoto, Kensuke Naka|2022|Dalton Trans.|51|13716|doi:10.1039/D2DT02145E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcrvb
title: CCDC 2156262: Experimental Crystal Structure Determination

description: Related Article: Akane Chishiro, Ippei Akioka, Akifumi Sumida, Kouki Oka, Norimitsu Tohnai, Takashi Yumura, Hiroaki Imoto, Kensuke Naka|2022|Dalton Trans.|51|13716|doi:10.1039/D2DT02145E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bcyrf
title: CCDC 2156445: Experimental Crystal Structure Determination

description: Related Article: Haifang Meng, Huiying Xu, Zhi Zhou, Zhenhao Tang, Yidi Li, Yu Zhou, Wei Yi, Xiaowei Wu|2022|Green Chemistry|24|7012|doi:10.1039/D2GC02347D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bdj1b
title: CCDC 2156981: Experimental Crystal Structure Determination

description: Related Article: Samuel Francis, Craig R. Rice, Paul A. Scattergood, Paul I. P. Elliott|2022|Dalton Trans.|51|13692|doi:10.1039/D2DT02503E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bdj2c
title: CCDC 2156982: Experimental Crystal Structure Determination

description: Related Article: Samuel Francis, Craig R. Rice, Paul A. Scattergood, Paul I. P. Elliott|2022|Dalton Trans.|51|13692|doi:10.1039/D2DT02503E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.