cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20499687.v1
title: Dataset of AutoMS

description: Dataset of AutoMS
DOI: 10.6084/m9.figshare.24902922.v8
title: Dataset on Ecological Restoration Enhancing Carbon Stocks in Drylands

description: <b>Ecological restoration enhances dryland carbon stock by reducing surface soil carbon loss due to wind erosion. </b><b>PNAS, 2024 Vol. 121, e2416281121.</b> Ecological restoration is widely hypothesized to enhance ecosystem carbon stocks by stimulating plant photosynthetic carbon fixation. However, the role of vegetation in mitigating dryland soil carbon loss from wind erosion is often overlooked. This study distinguishes the contributions of increased plant carbon input and reduced wind erosion carbon loss to ecosystem carbon stocks under ecological restoration through a comprehensive regional survey covering an area of 3.14 million km<sup>2</sup> and a 13-year manipulative experiment in China's drylands. Contrary to widely accepted consensus, enhanced plant growth contributes little to increased carbon stocks under ecological restoration, which is predominantly caused by reduced surface soil carbon loss due to suppressed wind erosion. This finding reveals a novel but often-overlooked mechanism enhancing dryland carbon stocks.
DOI: 10.6084/m9.figshare.26266157.v1
title: Supplementary Material for: Impact of protein intake after intensive care unit on discharge destination for critically ill patients: A single-center prospective observational study

description: Introduction: Although nutritional therapy may be able to enable ICU survivors to return home instead of being discharged to a rehabilitation facility, post-ICU discharge nutritional therapy lacks investigation. This study evaluated the impact of nutritional therapy after ICU on discharge destination in critically ill patients.
Methods: We enrolled consecutive adult patients who spent &gt;72 hours in the ICU from December 2020 to March 2023. The primary outcome was discharge destination. Energy and protein intake during the ICU stay and on days 7 and 14 after ICU discharge were evaluated. The target protein intake during the intensive treatment and general ward phases were 0.8 and 1.0 g/kg/day, respectively. Patients were categorized into home discharge (group A) and rehabilitation transfer (group B) groups. Factors affecting the discharge destination were evaluated using logistic regression analysis.
Results: Of the 183 patients included, 134 belonged to group A and 49 to group B. In group A, more patients reached the protein intake target than in group B. Logistic regression analysis identified achieving the protein intake target as an independent predictor of home discharge.
Conclusion: Further studies are required to confirm the relationship between nutritional therapy during general ward and patient outcomes.
DOI: 10.6084/m9.figshare.27989726.v1
title: salivary microbiome and metabolites associated with immunotherapy efficacy in lung cancer

description: Lung cancer is a leading cause of cancer mortality, with NSCLC comprising the majority of cases. Despite the advent of immune checkpoint inhibitors(ICIs), a significant number of patients fail to achieve durable respond, highlighting the need to understand the factors influencing treatment efficacy.Salivasamples and tumor samplesfrom 20 NSCLC patientswere collected. The salivary microbiota was profiled using mNGS and the metabolites were analyzed via LC/MS to identify the correlationsamong bacteria, metabolitesand immunotheropy responses.
DOI: 10.6084/m9.figshare.28080251.v1
title: F1000 Data of Cervical spine

description: F1000 data of cervical spine
DOI: 10.6084/m9.figshare.29090969.v1
title: Interview Files

description: Recordings of interviews, demographic surveys, and relevant notes.
DOI: 10.6084/m9.figshare.26337067.v1
title: GBIF records

description: GBIF records downloaded for each of six taxonomic groups between July 1 and December 31, 2022: fungi, terrestrial and freshwater vascular plants, freshwater fishes, herpetofauna (amphibians and reptiles), birds, and mammals.
DOI: 10.6084/m9.figshare.7822493.v1
title: Dynamically Rescaled Hamiltonian Monte Carlo for Bayesian Hierarchical Models

description: Dynamically rescaled Hamiltonian Monte Carlo is introduced as a computationally fast and easily implemented method for performing full Bayesian analysis in hierarchical statistical models. The method relies on introducing a modified parameterization so that the reparameterized target distribution has close to constant scaling properties, and thus is easily sampled using standard (Euclidian metric) Hamiltonian Monte Carlo. Provided that the parameterizations of the conditional distributions specifying the hierarchical model are “constant information parameterizations” (CIPs), the relation between the modified- and original parameterization is bijective, explicitly computed, and admit exploitation of sparsity in the numerical linear algebra involved. CIPs for a large catalogue of statistical models are presented, and from the catalogue, it is clear that many CIPs are currently routinely used in statistical computing. A relation between the proposed methodology and a class of explicitly integrated Riemann manifold Hamiltonian Monte Carlo methods is discussed. The methodology is illustrated on several example models, including a model for inflation rates with multiple levels of nonlinearly dependent latent variables. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.c.3627560_d2.v1
title: Additional file 2: Table S1. of Widespread RNA binding by chromatin-associated proteins

description: Protein antibodies. (XLSX 46 kb)
DOI: 10.17632/chcnh9g262
title: Decoding Acute Myocarditis in COVID-19 Patients: A Machine Learning Approach to Predictive Modelling through Blood Indices and Biomarker Analysis

description: The Figure and table of Manuscript “Decoding Acute Myocarditis in COVID-19 Patients: A Machine Learning Approach to Predictive Modelling through Blood Indices and Biomarker Analysis”. Blood samples from 4,500 COVID-19 patients and 562 myocarditis patients. Analysis coding as shown below:
DOI: 10.6084/m9.figshare.24842055.v1
title: Williams et al. - Consumption of rodenticide baits by invertebrates as a potential route into the diet of insectivores - field data and pilot data

description: European hedgehogs (<i>Erinaceus europaeus</i>) continue to experience a notable long-term decline across the UK. A key threat they face is exposure to anticoagulant rodenticides, however the pathway of exposure is currently unknown. This study aimed to examine whether invertebrate prey are a potential vector for anticoagulant rodenticides in the diet of the European hedgehog. A field study measured the uptake of rodenticide baits in invertebrates across a variety of habitats and locations. Uptake was negligible in captured insects, however 20.7% of slugs and 18.4% of snails captured showed uptake of bait. Both the percentage of and total number of molluscs showing uptake of bait significantly decreased with distance captured from the bait boxes, and increased with proximity to buildings. Maximum temperature had a significant negative impact on the percentage of molluscs showing uptake of baits, but no effect on the total number. The presence of copper tape significantly decreased the number of molluscs entering the bait boxes. Based on these data it seems likely that molluscs pose a significant threat to European hedgehogs via secondary rodenticide poisoning. This research has provided a more comprehensive idea of which prey items pose an exposure risk to hedgehogs and which environmental factors influence this; knowledge which has the potential to aid the development of effective mitigation measures. Further investigation into using mollusc repellents around bait boxes should be considered.
DOI: 10.6084/m9.figshare.27297603.v2
title: MUSIQ - Instrumento para impressão.

description: Esta é uma ferramenta projetada para ajudá-lo a avaliar aspectos de seu contexto local que podem afetar o sucesso de seu projeto de melhoria de qualidade. Identificamos vários fatores do sistema de saúde que influenciam no sucesso da implementação de projetos de melhoria da qualidade. Resumimos esses fatores e como eles influenciam o sucesso em um modelo chamado MUSIQ. Esta ferramenta lhe ajudará a examinar seu contexto usando o modelo MUSIQ.Este trabalho está licenciado sob CC BY 4.0. Para ver uma cópia desta licença, visite https://creativecommons.org/licenses/by/4.0/© 2 por Zenewton A. S. Gama; Sarah E. C. B. Oliveira; Natália G. Linhares.
DOI: 10.6084/m9.figshare.5122717.v1
title: Supplementary Material for: Antiproteinuric Effect of Chemokine C-C Motif Ligand 2 Inhibition in Subjects with Acute Proliferative Lupus Nephritis

description: <i>Background/Aims:</i> To test the role of chemokine C-C motif ligand 2 (CCL2) in the pathogenesis of lupus nephritis (LN), we evaluated the effects of CCL2 inhibition by bindarit therapy in patients with systemic lupus and active renal disease. <i>Methods:</i> In this proof-of-concept, prospective, randomized, double-blind clinical study, 22 subjects with acute LN were assigned on a 1:1 ratio to 24-week treatment with bindarit (1,200 mg/day) or matching placebo. All subjects were on the same standardized steroid background therapy. Urinary CCL2, urinary albumin excretion (UAE), estimated glomerular filtration rate, time to remission and time to relapse of LN were compared between groups. <i>Results:</i> Urinary CCL2 significantly decreased during bindarit therapy (p = 0.008 vs. baseline) with a reduction that approximated 50% at study end. CCL2 reduction was paralleled by a persistent reduction in UAE that averaged 80% vs. baseline and approximated 90% at study end. Renal function recovery was similar and no difference was found in terms of time to remission and time to relapse of LN between treatment arms. Treatment was safe and well tolerated in all patients. <i>Conclusion:</i> In lupus subjects with active nephritis, bindarit significantly reduced albuminuria and urinary CCL2 levels. This study provides the background for longer trials to test renoprotective effect of CCL2 inhibition in LN.
DOI: 10.6084/m9.figshare.5142262.v2
title: C++ source code and R scripts for Wittmann et al. (2017)

description: This folder contains the simulation program, summarized simulation results, and all scripts underlying the analyses and plots in Wittmann et al. (2017) Seasonally fluctuating selection can maintain polymorphism at many loci via segregation lift.<br>
DOI: 10.17632/93ztc35ypy
title: Thermogravimetry outputs on different BFS-blended cement paste formulations from 7 to 960 days

description: This study aims to investigate the effect of blast furnace slag (BFS) affects the hydration process of blended cement. The data presented here are the results obtained from thermogravimetry measurements on four distinct cement formulations (P0: 100% CEMI, P30: 70% CEM I + 30% BFS, P50: 50% CEM I + 50% BFS, and P80: 20% CEM I + 80% BFS) over a curing period ranging from 7 to 960 days under wet conditions.
DOI: 10.6084/m9.figshare.19403531.v1
title: Delmont et al. 2022

description: This is the data needed for the AGNOSTOS related analyses for the Delmont et al. publication
DOI: 10.6084/m9.figshare.21523479.v1
title: Word Dataset (Sword6k)

description: A Roman word dataset of scene word text images named Scene Word Dataset (SWord6k) is developed for character segmentation, Character recognition, text detection, and script identification. All images of SWord6k datasets are captured from an outdoor environment. These images are collected from banners, advertisements, shop names, and posters from different sources, like shopping malls, book fairs, and puja pandals. The SWord6k dataset contains 6,661 scene word images in "png" file format. Three types of ground truth annotations are composed for the SWord6k dataset, viz (i) component level i.e. to check whether a component is text or not, (ii) Script level i.e. to identify the script, (iii) recognition level i.e., character/word recognition of text. Each image's ground truth level annotations are stored in XML(extensible markup language) file format.
DOI: 10.6084/m9.figshare.26367490.v1
title: Raw data for: Topography modifies the effect of mycorrhizal type on soil carbon and nitrogen accumulation in a subtropical mountainous forest

description: Soil data from a 25-ha fully mapped subtropical mountainous forest plot.
DOI: 10.6084/m9.figshare.6328295.v6
title: Apertures Shaped as National Borders and Their Fraunhofer Diffraction Patterns

description: Have we ever considered how elegant a diffraction pattern may appear based on an aperture in the shape of one’s nation? <br>Apertures in the shape of national borders were developed on quartz substrates with a thickness of 170 μm by depositing chromium and using photolithography to etch the national borders, which scaled with the geographical area of each used nation. The nations were selected in order of total area, as provided by the United Nations Statistics Division, starting with the largest nation and including all nations with an area larger than 8 × 10<sup>10</sup> m<sup>2</sup>. Only mainland nations included in the International Organization for Standardization (ISO) document ISO 3166-1 are used.<br>All nations are ranked by geographical size and their FFT calculations and experimental data are presented in an array in the remainder of the document. Nations marked with the letters from A through F are presented in the main text. All Fraunhofer diffraction calculations and experimental data are presented from a perspective similar to the main text, 1.35 mm away from the aperture. All diffraction images measure 400 μm in both the vertical and horizontal directions. For images of the apertures, subgroups of nations are imaged at different magnifications for clarity. Nations #1 - #33, nations #34 - #77, and nations #78 - #113 all measure 340 μm, 170 μm, and 68 μm, respectively, in both the vertical and horizontal directions. <br><br>Lower resolution images are also available in JPEG format.<br>
DOI: 10.6084/m9.figshare.14745327.v3
title: Electronic and phonon density of states

description: Using OptB88vdW Linear optics and Finite difference based gamma point phonons for conventional cells for elastic constants.
DOI: 10.6084/m9.figshare.14778750.v2
title: Brain MRI Dataset

description: This dataset was curated in collaboration between the Computer Science and Engineering Department, University of Dhaka and the National Institute of Neuroscience, Bangladesh. It comprise 5,285 T1-weighted contrast- enhanced brain MRI images belonging to 38 categories. This work is accompanied by a paper found here http://arxiv.org/abs/2106.07333<br>
DOI: 10.6084/m9.figshare.28789946.v3
title: Dissertation Data - Raw Data and Tests

description: A collection of data used within a dissertation submitted to the London School of Economics.<br><br>The data concerns the occurrences of three disarmament-related words across approximately four years in seven news publications
DOI: 10.6084/m9.figshare.29052383.v1
title: Handler_OSU Water Science Seminar_Slides

description: Cyanobacteria blooms that produce toxins are a growing concern for water quality and water managers across the United States. Our team uses field data from national surveys of lakes to build models that help us understand the extent, drivers, and risk of toxic blooms for thousands to hundreds of thousands of lakes across the conterminous US. This presentation covers use of statistical survey design to infer the extend of blooms across the country, combining field and satellite data estimate risk of toxic blooms in thousands of lakes, and leveraging multiple national datasets to understand drivers and estimate the risk of blooms in 125,000 lakes across the US. The toxic bloom risk estimates can be used to prioritize which lakes receive additional monitoring and target near-lake communities for risk communication.
DOI: 10.6084/m9.figshare.29100599.v3
title: <b>Definitional Reference for CAT'S Theory: Concepts, Symbols, and Equations</b>

description: This dataset includes the vibrational domain table and supporting visual chart from CAT'S Theory, a multidimensional framework of consciousness. The CSV outlines symbolic mappings between physical, quantum, social, and mathematical domains, connected through resonance-based layering. The accompanying tan chart offers a visual interpretation of domain functions across the 5D/6D toroidal structure. This material supports theoretical exploration of consciousness, intent, and binary emergence in reality modeling. Includes master glossary of CAT'S Theory terminology and equations for reference.
DOI: 10.6084/m9.figshare.29113871.v1
title: DEP Data_Upload

description: Students’ usage behavior toward digital exam pads in Indian university settings
DOI: 10.17632/pxszfs2vm5
title: Data for webinars

description: Location for the support materials for different webinars
DOI: 10.6084/m9.figshare.16866277.v1
title: Supplementary Material for: Mother’s Bed Incline and Desaturation Episodes in Healthy Term Newborns during Early Skin-to-Skin Contact: A Multicenter Randomized Controlled Trial

description: <b><i>Introduction:</i></b> Early skin-to-skin contact (ESSC) is associated with rare, sudden, unexpected postnatal collapse episodes. Placing the newborn in ESSC closer to an upright position may reduce the risk of airway obstruction and improve respiratory mechanics. This study assessed whether a greater inclination of the mother’s bed during ESSC would reduce the proportion of healthy term newborns (HTNs) who experienced episodes of pulse oximeter saturation (SpO<sub>2</sub>) &lt;91%. <b><i>Methods:</i></b> We conducted a multicenter randomized controlled trial comparing the effect of the mother’s bed incline, 45° versus 15°, on desaturation in HTNs during ESSC. Before delivery on 1,271 dyads, randomization was conducted, and stringent criteria to select healthy mothers and term newborns were monitored until after birth. Preductal SpO<sub>2</sub> was continuously monitored between 10 min and 2 h after birth. The primary outcome was the occurrence of at least one episode of SpO<sub>2</sub> &lt;91%. <b><i>Results:</i></b> 254 (20%) mother-infant dyads were eligible for analysis (45°, <i>n</i> = 126; 15°, <i>n</i> = 128). Overall, 57% (95% confidence interval [CI]: 51%–63%) of newborns showed episodes of SpO<sub>2</sub> &lt;91%. The proportion of infants with SpO<sub>2</sub> &lt;91% episodes was 52% in 45° and 62% in 15° (relative risk: 0.80; 95% CI: 0.6–1.07). <b><i>Conclusions:</i></b> We did not show that a high mother bed inclination during ESSC led to significantly fewer HTNs who experienced episodes of SpO<sub>2</sub> &lt;91%. Desaturation episodes from 10 min to 2 h after birth occurred in more than half of HTNs.
DOI: 10.6084/m9.figshare.22720291.v1
title: Plant physiological data

description: Our dataset gathers data collected from a time-course experiment, with four treatments: 1) control trees; 2) trees infected with <em>P. cinnamomi</em>; 3) trees inoculated with the BCA; 4) trees infected with <em>P. cinnamomi </em>and inoculated with the BCA. During the infection process, we measured plant morphological and physiological variables and collected rhizosphere soil samples for bacterial and fungal amplicon sequencing, bacterial RNA-seq and metabolomic analyses.
DOI: 10.6084/m9.figshare.24442084.v1
title: Baby Names Tamil

description: I give pdf for tamil baby names categories. this useful for parents to choose best tamil baby names with name meaning.
DOI: 10.17632/m7jfpw2r76
title: XIAP_SmacDIABLO_complex
DOI: 10.6084/m9.figshare.12388136.v1
title: ISDR trial SWAT dataset

description: ISDR trial SWAT dataset
DOI: 10.6084/m9.figshare.16987990.v1
title: xml file for standard BEAST input

description: The xml file include 100 individuals, and the label match the Table S1 in supplementary.
DOI: 10.6084/m9.figshare.22110941.v1
title: Butler et al Ecosphere Data.csv

description: Detection history and covariate values for red foxes in Maine, 2017-2020
DOI: 10.6084/m9.figshare.24658074.v3
title: PB Data

description: PB Data
DOI: 10.6084/m9.figshare.27275433.v3
title: data for paper Association of TPP

description: Association of gene TRH, PRL and PRLR with milk performance, reproductive traits and heat stress response in dairy cattle
DOI: 10.6084/m9.figshare.5418568.v1
title: Coordination of wings and sound

description: Datasheets for comparing acoustic and video information about wing-beat cycle and note-cycle of the crested pigeon take-off and accompanying alarm. Includes R code for comparing and analysing these two sources of information and generating the polar plots. Also includes a datasheet estimating wing-tip velocities under a simplified sinusoidal model.
DOI: 10.6084/m9.figshare.6406814.v1
title: Earthquake Prediction using SVR and HNN

description: Seismic indicators based earthquake prediction system using support vector regressor and hybrid neural networks<br>
DOI: 10.6084/m9.figshare.899751.v1
title: IDL Routine to rotate X, Y, Z coordinates

description: Takes a set of (x,y,z) coordinates (can be arrays of the same length), as well as a rotation matrix OR a set of 3 euler angles, then rotates the coordinates (see coord_rot.pro for more details). Please refer to Gagné et al. 2014 (see link) when using these routines.
DOI: 10.6084/m9.figshare.9586532.v1
title: TempEval-3 data

description: Data, submissions, and intermediate files from TempEval-3 held in 2013. Annotated in TimeML and TimeML strict. Includes silver data and TLINK merging tools.
DOI: 10.6084/m9.figshare.14672106.v1
title: ptsd2018

description: GWAS summary statistics from the Psychiatric Genomics Consortium (PGC)
DOI: 10.6084/m9.figshare.15112737.v2
title: Data from: Killer whale (Orcinus orca) population dynamics in response to a period of rapid ecosystem change in the eastern North Atlantic

description: This dataset contains the data files from the research article entitled "Killer whale (Orcinus orca) population dynamics in response to a period of rapid ecosystem change in the eastern North Atlantic". The files contain the capture histories of the individual killer whales photo-identified at herring wintering grounds in 1988-2019, and used for fitting capture-recapture models to estimate survival rates and abundance. All files can be imported directly into RMark and converted to .inp files to then fit models. The READ-ME.txt file provides a description for each data file.<br>
DOI: 10.6084/m9.figshare.28636109.v7
title: Towards More Dependable Specifications: An Empirical Study Exploring the Synergy of Traditional and LLM-Based Repair Approaches

description: Declarative specification languages like Alloy are critical for modeling and verifying complex software systems, yet repairing these specifications remains a significant challenge for ensuring software dependability. This study conducts the first comprehensive empirical evaluation comparing traditional systematic repair techniques with emerging Large Language Model (LLM)-based approaches across two established benchmarks, analyzing over 1,900 Alloy specifications.By systematically analyzing repair success rates, ground truth similarity, and repair generation strategies, we reveal nuanced performance characteristics of different repair methodologies. Our findings demonstrate that while traditional tools excel in systematic fault localization and achieving high ground truth similarity, LLM-based techniques—particularly multi-round prompting approaches—offer unique capabilities in addressing complex specification errors, with some hybrid approaches achieving repair rates of up to 85.5\%.Critically, we show that integrating traditional fault localization techniques with LLM-based repair strategies can significantly enhance overall repair effectiveness and specification dependability. This research provides a large-scale empirical evaluation of how various Alloy repair techniques work in synergy, offering valuable insights that chart a promising path for future automated specification repair approaches and contribute to the development of more reliable and secure software systems.