cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17630/b2162ee8-fbd2-4118-bd8e-3370c451468b
title: Cost-Effective 17O Enrichment and NMR Spectroscopy of Mixed- Metal Terephthalate Metal-Organic Frameworks (dataset)
DOI: 10.17630/129937d5-f15c-4ccd-ab0e-e407740ef4a2
title: Atomic-scale coexistence of short-range magnetic order and superconductivity in 2 Fe1+ySe0.1Te0.9 (dataset)

description: ----
The data files underpinning ‘’Atomic-scale coexistence of short-range magnetic order and superconductivity in 2 Fe1+ySe0.1Te0.9’ are not yet available pending journal publication
DOI: 10.17630/dfd2a167-f48e-4986-a09f-71a3e83749f0
title: Generating system-level responses from a network of simple synthetic replicators (dataset)
DOI: 10.7910/dvn/2secbx
title: The effects of drag-reducing polymers on hemodynamics and whole blood-endothelial interactions in 3D-printed vascular topologies

description: Most in vitro models use culture medium to apply fluid shear stress to endothelial cells, which does not capture the interaction between blood and endothelial cells. Here, we describe a new system to characterize whole blood flow through a 3D-printed, endothelialized vascular topology that induces flow separation at a bifurcation. Drag-reducing polymers, which have been previously studied as a potential therapy to reduce the pressure drop across the vascular bed, are evaluated for their effect on mitigating disturbed flow. Concentrations of 1000 ppm prevent recirculation and disturbed flow at the wall. Proteomic analysis of plasma collected from whole blood recirculated through the vascularized channel with and without drag-reducing polymers provides insight into the effects of flow regimes on levels of proteins indicative of endothelial-blood interaction. The results indicate that blood flow alters proteins associated with coagulation, inflammation, and other processes. Overall, these proof-of-concept experiments demonstrate the importance of using whole blood flow to study the endothelial response to perfusion.
DOI: 10.17630/d2a4211d-4b99-4e0c-bdc2-df0afb36d647
title: Assessment of the Regioselectivity in the Condensation Reaction of Unsymmetrical o-Phthaldialdehydes with Alanine (dataset)

description: Raw NMR data associated with publication entitled 'Assessment of the Regioselectivity in the Condensation Reaction of Unsymmetrical o-Phthaldialdehydes with Alanine'.
DOI: 10.57673/gccis-qj60
title: Security Datasets for Network and System Research

description: These datasets are collections of packet traffic captures resulting from attacks or information gathering activities.
DOI: 10.6084/m9.figshare.24975423
title: Supplementary Material for: A novel dry simulator model for learning comprehensive endoscopic retrograde cholangiopancreatography/endoscopic sphincterotomy procedures while minimizing adverse bleeding events (with Video)

description: Background: Endoscopic retrograde cholangiopancreatography (ERCP) and endoscopic sphincterotomy (EST) are essential skills for endoscopic cholangio-pancreatic procedures. However, these procedures have a high incidence of adverse events, and most training is currently patient-based. Herein, we aimed to develop an ERCP/EST simulator model to address the need for safer training alternatives, especially for learners with limited ERCP experience.
Methods: The model was designed to facilitate the use of actual endoscopic devices, supporting learning objectives that align with the components of the validated Bethesda ERCP Skill Assessment Tool (BESAT). BESAT focuses on skills such as papillary alignment and maintenance of duodenoscope position, gentle and efficient cannulation, controlled sphincterotomy in the correct trajectory, and guidewire manipulation. Thirty gastroenterology trainees used the simulator between May 2022 and March 2023, and their satisfaction was assessed using a visual analog scale (VAS) and pre- and post-training questionnaires.
Results: The novel simulator model comprises a disposable duodenal papillary portion, suitable for incision with an electrosurgical knife, alongside washable upper gastrointestinal tract and bile duct portions, designed for repeated use. The duodenal papillary portion enabled reproduction of a realistic endoscope position and the adverse bleeding events due to improper incisions. The bile duct portion allowed for the reproduction of fluoroscopic-like images, enabling learners to practice guidewire guidance and insert other devices. After training, the median VAS score reflecting the expectation for model learning significantly increased from 69.5 (interquartile range [IQR]:55.5–76.5) to 85.5 (IQR: 78.0–92.0) (P&lt;0.01). All participants expressed their desire for repeated simulator training sessions.
Conclusions: This innovative simulator serves as a practical educational tool, particularly beneficial for novices in ERCP. It facilitates hands-on practice with actual devices, enhancing procedural fluency and understanding of precise incisions to minimize the risk of bleeding complications during EST.
DOI: 10.6084/m9.figshare.24975423.v1
title: Supplementary Material for: A novel dry simulator model for learning comprehensive endoscopic retrograde cholangiopancreatography/endoscopic sphincterotomy procedures while minimizing adverse bleeding events (with Video)

description: Background: Endoscopic retrograde cholangiopancreatography (ERCP) and endoscopic sphincterotomy (EST) are essential skills for endoscopic cholangio-pancreatic procedures. However, these procedures have a high incidence of adverse events, and most training is currently patient-based. Herein, we aimed to develop an ERCP/EST simulator model to address the need for safer training alternatives, especially for learners with limited ERCP experience.
Methods: The model was designed to facilitate the use of actual endoscopic devices, supporting learning objectives that align with the components of the validated Bethesda ERCP Skill Assessment Tool (BESAT). BESAT focuses on skills such as papillary alignment and maintenance of duodenoscope position, gentle and efficient cannulation, controlled sphincterotomy in the correct trajectory, and guidewire manipulation. Thirty gastroenterology trainees used the simulator between May 2022 and March 2023, and their satisfaction was assessed using a visual analog scale (VAS) and pre- and post-training questionnaires.
Results: The novel simulator model comprises a disposable duodenal papillary portion, suitable for incision with an electrosurgical knife, alongside washable upper gastrointestinal tract and bile duct portions, designed for repeated use. The duodenal papillary portion enabled reproduction of a realistic endoscope position and the adverse bleeding events due to improper incisions. The bile duct portion allowed for the reproduction of fluoroscopic-like images, enabling learners to practice guidewire guidance and insert other devices. After training, the median VAS score reflecting the expectation for model learning significantly increased from 69.5 (interquartile range [IQR]:55.5–76.5) to 85.5 (IQR: 78.0–92.0) (P&lt;0.01). All participants expressed their desire for repeated simulator training sessions.
Conclusions: This innovative simulator serves as a practical educational tool, particularly beneficial for novices in ERCP. It facilitates hands-on practice with actual devices, enhancing procedural fluency and understanding of precise incisions to minimize the risk of bleeding complications during EST.
DOI: 10.17630/3a3a5abc-8458-4924-8e6c-b804347605e8
title: DLS-100 Solubility Dataset

description: 100 Molecules with measured and reported intrinsic aqueous solubilities, together with a suggested 75-25 training-test split.
DOI: 10.26036/cnp0004049
title: The Global Ocean Microbiome Catalogue

description: In the past two decades, many independent or large-scale projects have generated mass data silos on marine metagenomics but, until now, we still lack a unified and comprehensive collation. We collected public marine metagenomes from 2009 to 2020, reconstructed 43,191 qualified genomes. Combining these MAGs with public marine bacterial and archaeal genomes (NCBI, OMD and OceanDNA), we generated a non-redundant catalogue composed of 24,195 genomes, which represents the Global Ocean Microbiome Catalogue (GOMC).
DOI: 10.17630/97b7cdbd-2ed6-4bbe-8569-34de85dc60dd
title: Data underpinning: Benzene adsorption on Rh(111): A new perspective on intermolecular interactions and molecular ordering
DOI: 10.17630/5acc0b1b-145b-47f2-af0a-958b682e6742
title: Tuning Pd-nanoparticle@MIL-101(Cr) Catalysts for Tandem Reductive Amination (dataset)

description: The data files are not yet publicly available. Enquiries and requests for data should be directed to the publication's corresponding authors:

Anderson, A. E., Baddeley, C. J., & Wright, P. A. (2017). Tuning Pd-nanoparticle@MIL-101(Cr) catalysts for tandem reductive amination. Catalysis Letters, In press. DOI: 10.1007/s10562-017-2208-0
DOI: 10.17630/cfd84657-908f-42c9-aad7-fb70b8583188
title: Dataset underpinning: Superexchange-mediated negative thermal expansion in Nd-doped BiFeO3
DOI: 10.17630/c28fddad-6877-4c31-80fa-f88600b735ae
title: Bay-Region Functionalisation of Ar-BIAN Ligands and Their Use Within Highly Absorptive Cationic Iridium(III) Dyes (dataset)
DOI: 10.17630/32592d00-bf99-4df8-9e63-7277a6765686
title: Exact states and spectra of vibrationally dressed polaritons (dataset)

description: Data and python or mathematica plotting scripts to make figures in the paper in the title that is just accepted in ACS Photonics.
DOI: 10.17630/59eebede-1d1a-4a02-960c-e3010efa5ce0
title: Mesopelagic Biogeography

description: Shapefile demarking 10 mesopelagic classes as in Figure 3 in "Biogeography of the Global Ocean’s Mesopelagic Zone" (Proud et al., 2017)
DOI: 10.17630/ec27242a-dc7c-4b49-bdc1-fec66c1c0125
title: Switchable selectivity within a series of boronate esters for dynamic covalent exchange in nonaqueous solvents (dataset)

description: Nuclear magnetic resonance and mass spectrometry raw data files. For detailed information, see readme file.
DOI: 10.17630/86c5f65b-8c14-429e-97c1-8f8901290995
title: Data Underpinning: Orientation selection in high-field RIDME and PELDOR experiments involving low-spin CoII ions
DOI: 10.17630/0b84b1ad-176d-4185-a6bb-48b6e02797fc
title: Understanding a Hydroformylation Catalyst that Produces Branched Aldehydes from Alkyl Alkenes (dataset)

description: Data underpinning Understanding a Hydroformylation Catalyst that Produces Branched Aldehydes from Alkyl Alkenes (DFT data and NMR data)
DOI: 10.6084/m9.figshare.24975456
title: R Code for Figures and analysis

description: R code used for analysis of the viral data and for the creation of figures from the paper.
DOI: 10.17630/61a92a73-3cb6-4008-9bb4-904ea63dd6e5
title: Data underpinning article ""A reinvestigation of Na2Fe2(C2O4)3.2H2O: an iron-based positive electrode for secondary batteries"

description: Datasets
DOI: 10.17630/2013958a-4c9f-4859-b66d-ee88c39ef794
title: N-heterocyclic carbene self-assembled monolayers on copper and gold: dramatic effect of wingtip groups on binding, orientation and assembly (dataset)
DOI: 10.17630/71890c29-5494-4034-95d8-58b3e78f3a3a
title: Grafting of Technical Lignins through Regioselective Triazole Formation on β‑O‑4 Linkages (dataset)
DOI: 10.17630/e9a4fda9-3f3c-4f23-a6fc-227de27c9851
title: Data underpinning - Polarization dynamics in a photon Bose-Einstein Condensate
DOI: 10.17630/2dc12142-818e-4c40-8ae8-6ef03a75e49f
title: Data underpinning - "Investigating the molecular orientation of Ir(ppy)3 and Ir(ppy)2(acac) emitter complexes by X-ray diffraction"

description: The attached data underpin the publication, "Investigating the molecular orientation of Ir(ppy)3 and Ir(ppy)2(acac) emitter complexes by X-ray diffraction".  Data for each figure panel from the paper that displays numerical data are provided in the form of ASCII text-formatted data files (.csv) or as .mar2300 files.
DOI: 10.17630/00533fb3-e938-498d-bfe4-f07d82c309d6
title: Determining the Surface Structure of Silicated Alumina Catalysts via Isotopic Enrichment and Dynamic Nuclear Polarization Surface-Enhanced NMR Spectroscopy (dataset)
DOI: 10.17630/ea1b44a8-ea97-4c75-9758-49df785607fb
title: Data underpinning article "KLi3Fe(C2O4)3: a perovskite-like compound with 1:3 ordering at both A and B sites"

description: Raw data: powder and single crystal XRD, IR and TG data
DOI: 10.17630/1e47af33-8a1a-4c1a-9505-a141b973cdeb
title: Pick and Place Distributed Feedback Lasers using Organic Single Crystals (dataset)
DOI: 10.17630/34165a5d-3c87-4645-a6c8-8bbf330196b0
title: Cryogenic STM in 3D vector magnetic fields realized through a rotatable insert (dataset)
DOI: 10.17630/ea33220b-53f6-4503-84d0-ae052914ecff
title: Near-Infrared Fluorescence of Silicon Phthalocyanine Carboxylate Esters (dataset)
DOI: 10.5066/p9t5sfc5
title: GIS shapefile and summary tables of the extent of irrigated agricultural land use for 11 counties fully or partially within the St. Johns River Water Management District Florida, 2022–23

description: A Geographic Information System shapefile and summary tables of the extent of irrigated agricultural land-use are provided for eleven counties fully or partially within the St. Johns River Water Management District (full-county extents of: Brevard, Clay, Duval, Flagler, Indian River, Nassau, Osceola, Putnam, Seminole, St. Johns, and Volusia counties). These files were compiled through a cooperative project between the U.S. Geological Survey and the Florida Department of Agriculture and Consumer Services, Office of Agricultural Water Policy. Information provided in the shapefile includes the location of irrigated lands that were verified during field surveying that started in November 2022 and concluded in August 2023. Field data collected were crop type, irrigation system type, and primary water source used. A map image of the shapefile is also provided. Previously published estimates of irrigation acreage for years since 1987 are included in summary tables.
DOI: 10.17630/03fa38f2-b858-4fff-a478-83e61672955c
title: Enzyme Activity by Design: An Artificial Rhodium Hydroformylase for Linear Aldehyes

description: Data files relating to the paper ' Enzyme Activity by Design: An Artificial Rhodium Hydroformylase for Linear Aldehyes' published in Angew. Chem. Int. Ed.
DOI: 10.5281/zenodo.10139584
title: Raw Plantago lanceolata trait data and metadata from Dawson et al. Root traits vary as much as leaf traits and have consistent phenotypic plasticity among 14 populations of a globally widespread herb.
DOI: 10.5281/zenodo.10139585
title: Raw Plantago lanceolata trait data and metadata from Dawson et al. Root traits vary as much as leaf traits and have consistent phenotypic plasticity among 14 populations of a globally widespread herb.
DOI: 10.5281/zenodo.10473872
title: Raw Plantago lanceolata trait data and metadata from Dawson et al. Root traits vary as much as leaf traits and have consistent phenotypic plasticity among 14 populations of a globally widespread herb.
DOI: 10.6084/m9.figshare.24975468
title: NCLDV MCP Tree, alignment and raw sequences

description: This dataset contains all recovered MCP sequences (&gt;150aa) from the brine pool metagenome as well as a trimmed alignment and treefile (made with IQTREE).
DOI: 10.6084/m9.figshare.24975468.v1
title: NCLDV MCP Tree, alignment and raw sequences

description: This dataset contains all recovered MCP sequences (&gt;150aa) from the brine pool metagenome as well as a trimmed alignment and treefile (made with IQTREE).
DOI: 10.6084/m9.figshare.24975477
title: Supplementary Material for: The prenatal hypoxic pathology associated with maternal stress predisposes to dysregulated expression of the chrna7 gene and the subsequent development of nicotine addiction in adult offspring

description: Introduction: Previous studies have shown that fetal hypoxia predisposes individuals to develop addictive disorders in adulthood. However, the specific impact of maternal stress, mediated through glucocorticoids and often coexisting with fetal hypoxia, is not yet fully comprehended. Methods: To delineate the potential effects of these pathological factors, we designed models of prenatal severe hypoxia (PSH) in conjunction with maternal stress and prenatal intrauterine ischemia (PII). We assessed the suitability of these models for our research objectives by measuring HIF1α levels and evaluating the glucocorticoid neuroendocrine system. To ascertain nicotine dependence, we employed the conditioned place aversion test and the startle response test. To identify the key factor implicated in nicotine addiction associated with PSH, we employed techniques such as western blot, immunohistochemistry, and correlational analysis between chrna7 and nr3c1 genes across different brain structures. Results: In adult rats exposed to PSH and PII, we observed increased levels of HIF1α in the hippocampus (HPC). However, the PSH group alone exhibited reduced glucocorticoid receptor (GR) levels and disturbed circadian glucocorticoid rhythms. Additionally, they displayed signs of nicotine addiction in the conditioned place aversion and startle response tests. We also observed elevated levels of phosphorylated DARPP-32 protein in the nucleus accumbens (NAc) indicated compromised glutamatergic efferent signaling. Furthermore, there was reduced expression of α7 nAChR, which modulates glutamate release, in the medial prefrontal cortex (PFC) and HPC. Correlation analysis revealed strong associations between chrna7 and nr3c1 expression in both brain structures.
Conclusion: Perturbations in the glucocorticoid neuroendocrine system and glucocorticoid-dependent gene expression of chrna7 associated with maternal stress response to hypoxia in prenatal period favor the development of nicotine addiction in adulthood.
DOI: 10.6084/m9.figshare.24975477.v1
title: Supplementary Material for: The prenatal hypoxic pathology associated with maternal stress predisposes to dysregulated expression of the chrna7 gene and the subsequent development of nicotine addiction in adult offspring

description: Introduction: Previous studies have shown that fetal hypoxia predisposes individuals to develop addictive disorders in adulthood. However, the specific impact of maternal stress, mediated through glucocorticoids and often coexisting with fetal hypoxia, is not yet fully comprehended. Methods: To delineate the potential effects of these pathological factors, we designed models of prenatal severe hypoxia (PSH) in conjunction with maternal stress and prenatal intrauterine ischemia (PII). We assessed the suitability of these models for our research objectives by measuring HIF1α levels and evaluating the glucocorticoid neuroendocrine system. To ascertain nicotine dependence, we employed the conditioned place aversion test and the startle response test. To identify the key factor implicated in nicotine addiction associated with PSH, we employed techniques such as western blot, immunohistochemistry, and correlational analysis between chrna7 and nr3c1 genes across different brain structures. Results: In adult rats exposed to PSH and PII, we observed increased levels of HIF1α in the hippocampus (HPC). However, the PSH group alone exhibited reduced glucocorticoid receptor (GR) levels and disturbed circadian glucocorticoid rhythms. Additionally, they displayed signs of nicotine addiction in the conditioned place aversion and startle response tests. We also observed elevated levels of phosphorylated DARPP-32 protein in the nucleus accumbens (NAc) indicated compromised glutamatergic efferent signaling. Furthermore, there was reduced expression of α7 nAChR, which modulates glutamate release, in the medial prefrontal cortex (PFC) and HPC. Correlation analysis revealed strong associations between chrna7 and nr3c1 expression in both brain structures.
Conclusion: Perturbations in the glucocorticoid neuroendocrine system and glucocorticoid-dependent gene expression of chrna7 associated with maternal stress response to hypoxia in prenatal period favor the development of nicotine addiction in adulthood.
DOI: 10.17630/e761d899-5cac-410f-8bf8-c912cd796031
title: Fractionation and DOSY NMR as Analytical Tools: from Model Polymers to a Technical Lignin

description: NMR and EPR data supporting publication
DOI: 10.17630/54ffbbef-f259-4a45-894b-b67a0f99039b
title: Blue-Emitting Cationic Iridium(III) Complexes Featuring Pyridylpyrimidine Cyclometalating Ligands and their Use in Sky-Blue and Blue-Green Light-Emitting Electrochemical Cells (LEECs) and Organic Light-Emitting Diodes (OLEDs) (dataset)
DOI: 10.6084/m9.figshare.24972954.v1
title: R10.4.1 KIT14 comparison assemblies

description: Whole genome bacterial assemblies of bacterial pathogens, assembled with either R10.4.1 ONT sequences or Hybrid Illumina-Nanopore assemblies.
DOI: 10.6084/m9.figshare.24972954
title: R10.4.1 KIT14 comparison assemblies

description: Whole genome bacterial assemblies of bacterial pathogens, assembled with either R10.4.1 ONT sequences or Hybrid Illumina-Nanopore assemblies.
DOI: 10.35090/gatech/72965
title: Metagenomic evaluation of the performance of passive Moore swabs for sewage monitoring relative to composite sampling over time resolved deployments
DOI: 10.5281/zenodo.10479377
title: Escherichia coli vs. Haemophilus Influenzae Genome sequences - Blastn

description: Blastn analysis was performed between the Escherichia coli (E coli U00096.2) and Haemophilus influenzae L42023 genome. A good number of similarities or alignments by Blastn were observed between these two genomic sequences. The accompanying dataset shows the results. E coli exists as a normal and common gut microbiome. However, it is ‘megatronous,’ and it is known to be the most common cause and the perpetrator of upper and lower urinary tract infections. This is more pronounced in diabetic and immunocompromised patients. A dedicated vaccine is not available in the current scenario. The genomic sequence coding for P fimbriae of E coli can be copied and added to the H influenzae genome through a plasmid or phage. This will provide a source for Haemophilus influenzae (‘Bumble bee’) vaccine, which could effectively reduce the severity of E coli infections.
DOI: 10.5281/zenodo.10479378
title: Escherichia coli vs. Haemophilus Influenzae Genome sequences - Blastn

description: Blastn analysis was performed between the Escherichia coli (E coli U00096.2) and Haemophilus influenzae L42023 genome. A good number of similarities or alignments by Blastn were observed between these two genomic sequences. The accompanying dataset shows the results. E coli exists as a normal and common gut microbiome. However, it is ‘megatronous,’ and it is known to be the most common cause and the perpetrator of upper and lower urinary tract infections. This is more pronounced in diabetic and immunocompromised patients. A dedicated vaccine is not available in the current scenario. The genomic sequence coding for P fimbriae of E coli can be copied and added to the H influenzae genome through a plasmid or phage. This will provide a source for Haemophilus influenzae (‘Bumble bee’) vaccine, which could effectively reduce the severity of E coli infections.