cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5446993
title: Supplementary Material for: A Patient with Nafcillin-Associated Drug-Induced Liver Failure

description: Nafcillin-induced acute liver injury is a rare and potentially fatal complication that has been known since the 1960s but inadequately studied. At this time, the only proven treatment is early discontinuation of the drug. Because of the high prevalence of nafcillin class antibiotic use in the United States, it is important for clinicians to have a high clinical suspicion for this diagnosis. We present a case of liver failure attributable to nafcillin use in a 68-year-old male with a history methicillin-sensitive <i>Staphylococcus</i> and L3/L4 osteomyelitis. After starting long-term antibiotic therapy, he presented with painless jaundice which necessitated discontinuation of the drug. At the time of presentation, the patient’s lab work exhibited a bilirubin/direct bilirubin of 9.4/8.2 mg/dL, alkaline phosphatase of 311 IU/L, and aspartate transaminase/alanine transaminase of 109/127 IU/L. The patient was switched to i.v. vancomycin given the concern for drug-induced liver injury. Imaging did not show obstruction of the hepatobiliary or pancreaticobiliary trees. Serology was unremarkable for viral etiology, autoimmune processes, Wilson disease, and hemochromatosis. A liver biopsy showed findings consistent with drug-induced liver injury. The patient’s liver function tests peaked at day 7 of admission and trended towards normal levels with cessation of nafcillin therapy. The patient was discharged with a diagnosis of nafcillin-induced acute liver injury. Our case highlights the importance of early recognition of the diagnosis and careful monitoring of liver function when nafcillin is employed in the clinical setting.
DOI: 10.6084/m9.figshare.5447122.v4
title: Data for experimental studies of the crystallisation of the alpha and gamma polymorphs of glcyine - from PhD thesis work of Dr Laurie Little at the University of Surrey

description: Each experiment is a sequence of images of a 96-well plate. Each well has 0.1 ml of supersaturated solution of glycine (aqueous, with variable amount of NaCl). Experiment duration is 2 days to a week. Crystals are observed to appear and grow in the wells. First observation of a crystal in a well is taken as the nucleation time for the crystal in that well.<br>2nd_paper .....xlsx spreadsheet contains nucleation times + polymorph (determined by Raman) of each crystal that nucleates in each run. 2 or 3 runs per salt concentration.Raman_spectra directory contains Raman spectra of crystalsXRD+Raman_conf directory has XRD patterns and Raman spectra for XRD confirmation that Raman can identify polymorphsNeedles+non-needles directory contains data analysis for crystals of two different (needled and non-needle) habits, to show that despite their different habits they are the same polymorph.<br>Needle_like_crystals2.xlsx spreadsheet contains fractions of crystals that have nucleated by that time and are needles, as a function of time. In other words number of needle-like crystals divided total number of crystals. Fig. 7 of Little et al (J Chem Phys., 2017) plots this data for alpha polymorph.<br><br>250mgmgl_r1_images directory contains the complete of images for run number 1 at NaCl concentration 250 mg/ml <br>Images for remaining runs are not here due to size limitations<br>
DOI: 10.6084/m9.figshare.5447122.v3
title: Data for experimental studies of the crystallisation of the alpha and gamma polymorphs of glcyine - from PhD thesis work of Dr Laurie Little at the University of Surrey

description: Each experiment is a sequence of images of a 96-well plate. Each well has 0.1 ml of supersaturated solution of glycine (aqueous, with variable amount of NaCl). Experiment duration is 2 days to a week. Crystals are observed to appear and grow in the wells. First observation of a crystal in a well is taken as the nucleation time for the crystal in that well.<br>2nd_paper .....xlsx spreadsheet contains nucleation times + polymorph (determined by Raman) of each crystal that nucleates in each run. 2 or 3 runs per salt concentration.Raman_spectra directory contains Raman spectra of crystalsXRD+Raman_conf directory has XRD patterns and Raman spectra for XRD confirmation that Raman can identify polymorphsNeedles+non-needles directory contains data analysis for crystals of two different (needled and non-needle) habits, to show that despite their different habits they are the same polymorph.<br>250mgmgl_r1_images directory contains the complete of images for run number 1 at NaCl concentration 250 mg/ml <br>Images for remaining runs are not here due to size limitations<br>
DOI: 10.17633/rd.brunel.5446813
title: Source and output data for "A generalized simulation development approach for predicting refugee destinations"

description: This archive contains the source and output data for the simulations used in:<br>Sulemenova, Bell and Groen: A generalized simulation development approach for predicting refugee destinations, Nature Scientific Reports, 2017.<br>
DOI: 10.6084/m9.figshare.5446939
title: Process Evaluation of the Integrated Childsmile Programme. Report of the sixth tranche of fieldwork (August 2015 to July 2016)

description: This report provides findings from the sixth tranche of the process evaluation of the integrated Childsmile programme, covering the period August 2015 to July 2016.<br>Childsmile is the national, early years oral health improvement in Scotland. It comprises interacting components (Core: toothbrushing in all nurseries and targeted primary schools, provision of oral health packs at key stages; Nursery & School: fluoride varnishing provided to children in targeted educational establishments; and Practice: support for families with young children to register with and attend dental practices and to engage in protecting their children's oral health).<br>The purpose of the process evaluation is to explore implementation of the programme, to aid the interpretation of its outcomes.<br>
DOI: 10.17633/rd.brunel.5446813.v1
title: Source and output data for "A generalized simulation development approach for predicting refugee destinations"

description: This archive contains the source and output data for the simulations used in:<br>Sulemenova, Bell and Groen: A generalized simulation development approach for predicting refugee destinations, Nature Scientific Reports, 2017.<br>
DOI: 10.6084/m9.figshare.5446720
title: Evolutionary_opinions

description: Data from the study "Evolutionary thinking among biology students in a third world country"; published in "Evolution Education and Outreach".
DOI: 10.6084/m9.figshare.5446693
title: field data

description: field data
DOI: 10.6084/m9.figshare.5446720.v1
title: Evolutionary_opinions

description: Data from the study "Evolutionary thinking among biology students in a third world country"; published in "Evolution Education and Outreach".
DOI: 10.6084/m9.figshare.5446654.v2
title: LiBRI Journal - Le Role de la Langue Roumaine dans le Processus D’internationalisation de L’enseignement Superieur Roumain

description: Abstract<br>This paper seeks to offer a clearer image of how the Underworld was illustrated and interpreted by Augustus` most prolific poet: Publius Vergilius Maro. The issues to be discussed are the relationship between reality and fiction in the sixth book of Aeneid and the role of memory in the creation of Inferno. Another issue put in discussion is the role of evil in common life in the Ancient Rome, a society that imagined an Underworld ruled by one god: Hades, a different kind of ruler that the other underworld gods fromcoexistent cultures. In his Inferno, the Augustan poet offers an image of how the great Roman Empire was, and more important, how it wanted to be seen in front of posterity. The main virtues promulgated by Augustus through his Pax Romana are to be found in the national epopee, but are these ideas changing the image of the Inferno? Extremely interesting is in how the politically ideas are combined with the religious ones, and the Shield of Anchises is one of the best examples on proving many of Augustus ideaswhich are to be found in Virgil`s Underworld. The glorious future of Rome is observed from the past, which is not to be forgotten, as it can be seen from the beginning of Anchises` speech, when only after the explanation of life`s meaning the reader can see the Roman warriors and the premature death of Marcellus. <br><b>For more, access the following link:</b><b>https://www.edusoft.ro/brain/index.php/libri/article/view/604</b><br>
DOI: 10.6084/m9.figshare.5446597
title: A Centrifugation-based Physicochemical Characterization Method for the Interaction between Proteins and Nanoparticles

description: AUC raw data
DOI: 10.6084/m9.figshare.5446573
title: Magnesium oxide use and reduced risk of dementia: a retrospective, nationwide cohort study in Taiwan

description: <b>Objective:</b> Dietary magnesium may be associated with a lower risk of dementia; however, the impact of magnesium oxide (MgO), a common laxative, on dementia has yet to be elucidated. This study aimed to investigate the association between the usage of MgO and the risk of developing dementia. <b>Methods:</b> We used a dataset from the National Health Research Institute Database (NHRID) of Taiwan containing one million randomly sampled subjects to identify patients aged ≥50 years with no history of MgO usage. A total of 1547 patients who had used MgO were enrolled, along with 4641 controls who had not used the MgO propensity score matched by age, gender and comorbidity, at a ratio of 1:3. After adjusting for confounding risk factors, a Cox proportional hazards model was used to compare the risk of developing dementia during a 10 year follow-up period. <b>Results:</b> Of the enrolled patients, 44 (2.84%) developed dementia, when compared to 199 (4.28%) in the control group. The Cox proportional hazards regression analysis revealed that the patients who had used MgO were less likely to develop dementia with a crude hazard ratio of 0.617 (95% CI, 0.445–0.856, <i>p</i> = .004). After adjusting for age, gender, comorbidity, geographical area and urbanization level of residence, and monthly income, the adjusted hazard ratio was 0.517 (95% CI, 0.412–0.793, <i>p</i> = .001). <b>Conclusions:</b> The patients who used MgO had a decreased risk of developing dementia. Further studies on the effects of MgO in reducing the risk of dementia are therefore warranted.
DOI: 10.6084/m9.figshare.5446573.v1
title: Magnesium oxide use and reduced risk of dementia: a retrospective, nationwide cohort study in Taiwan

description: <b>Objective:</b> Dietary magnesium may be associated with a lower risk of dementia; however, the impact of magnesium oxide (MgO), a common laxative, on dementia has yet to be elucidated. This study aimed to investigate the association between the usage of MgO and the risk of developing dementia. <b>Methods:</b> We used a dataset from the National Health Research Institute Database (NHRID) of Taiwan containing one million randomly sampled subjects to identify patients aged ≥50 years with no history of MgO usage. A total of 1547 patients who had used MgO were enrolled, along with 4641 controls who had not used the MgO propensity score matched by age, gender and comorbidity, at a ratio of 1:3. After adjusting for confounding risk factors, a Cox proportional hazards model was used to compare the risk of developing dementia during a 10 year follow-up period. <b>Results:</b> Of the enrolled patients, 44 (2.84%) developed dementia, when compared to 199 (4.28%) in the control group. The Cox proportional hazards regression analysis revealed that the patients who had used MgO were less likely to develop dementia with a crude hazard ratio of 0.617 (95% CI, 0.445–0.856, <i>p</i> = .004). After adjusting for age, gender, comorbidity, geographical area and urbanization level of residence, and monthly income, the adjusted hazard ratio was 0.517 (95% CI, 0.412–0.793, <i>p</i> = .001). <b>Conclusions:</b> The patients who used MgO had a decreased risk of developing dementia. Further studies on the effects of MgO in reducing the risk of dementia are therefore warranted.
DOI: 10.6084/m9.figshare.5446597.v2
title: A Centrifugation-based Physicochemical Characterization Method for the Interaction between Proteins and Nanoparticles

description: AUC raw data
DOI: 10.6084/m9.figshare.5446570
title: AD5 INHIBITION

description: adenovirus mus:ot inhibition
DOI: 10.6084/m9.figshare.5446597.v1
title: A Centrifugation-based Physicochemical Characterization Method for the Interaction between Proteins and Nanoparticles

description: AUC raw data
DOI: 10.17028/rd.lboro.5446561.v1
title: Understanding arithmetic concepts: The role of domain-specifc and domain-general skills - dataset

description: This dataset is from a study of children's understanding of arithmetic concepts. It consists of scores from a series of mathematical and domain-general tasks for a sample of 77 children aged 7 - 10 years old.<br><br>Measures:<br>Ravens Coloured Progressive Matrices<br>WIAT Numerical Operations and Mathematics Reasoning<br>Conceptual Understanding<br>Counting skills<br>Number fact knowledge<br>Arithmetic strategy use and efficiency<br>Number recognition<br>Number line PAE<br>Nonsymbolic and symbolic magnitude comparison<br>Working memory: Digit Recall, Word recall and AWMA Mr X<br>NEPSY Inhibition and Switching<br>NEPSY visuospatial processing Arrows subtest<br>
DOI: 10.6084/m9.figshare.5446531
title: Assembly, annotation result of Xinjiangpantao 1 and Xiamiao 1

description: The assembly and annotation result of Xinjiangpantao 1 (P. ferganensis) and Xiamiao 1 (P. persica) which has a close relationship with the former.<br>
DOI: 10.6084/m9.figshare.5446531.v1
title: Assembly, annotation result of Xinjiangpantao 1 and Xiamiao 1

description: The assembly and annotation result of Xinjiangpantao 1 (P. ferganensis) and Xiamiao 1 (P. persica) which has a close relationship with the former.<br>
DOI: 10.6084/m9.figshare.5446519
title: Acrylamide levels in potato crisps in Europe from 2002 to 2016

description: European manufacturers’ data on acrylamide in potato crisps from 2002 to 2016 were analysed. A previous study showed a 53% reduction in mean acrylamide levels from 763 ng g<sup>−1</sup> in 2002 to 358 ng g<sup>−1</sup> in 2011. Analysis of data from the longer period showed that since 2011 there has been a levelling off, with the mean level for 2016 being 412 ng g<sup>−1</sup> (still a 46% reduction from 2002), suggesting that the most effective acrylamide reduction measures had been devised and implemented by 2011. There were similar trends in the 90<sup>th</sup> and 95<sup>th</sup> quantile values, with the 90<sup>th</sup> quantile values being below 1000 ng g<sup>−1</sup> (the European Commission’s current ‘Indicative Value’ for acrylamide in potato crisps) since 2010. The proportion of samples with acrylamide above 2000 ng g<sup>−1</sup> fell from 4.8% in 2002 to 0.6% in 2016. Acrylamide levels showed marked seasonal variability, being highest in the first half of the year when potatoes were being used from storage, and lowest from July to September when potatoes were being harvested. Acrylamide levels were higher in thicker types of crisp in the early years of the study, but this difference disappeared in the later years, suggesting that manufacturers had acted to reduce acrylamide formation in these products. Higher values for acrylamide were recorded in north and east Europe than in the south and west up to 2013. Levels in the north and east declined in recent years, but remained higher in the north than in the other regions. The manufacturers’ data were compared with a much smaller dataset provided by the European Food Safety Authority (EFSA). Levels of acrylamide in the EFSA dataset were consistently higher than in the manufacturers’ data, possibly due to uneven sampling through the year and the seasonality of acrylamide levels.
DOI: 10.6084/m9.figshare.5446525
title: Data for research article titled: "Lactobacillus rhamnosus PB01 (DSM 14870) supplementation affects markers of sperm kinematic parameters in a diet-induced obesity mice model"

description: Data for research article titled: "Lactobacillus rhamnosus PB01 (DSM 14870) supplementation affects markers of sperm kinematic parameters in a diet-induced obesity mice model".<br><br>Study was carried out in accordance with the “Guidelines for Animal Experimentation” and under approval of “The Danish Animal Experiments Inspectorate” no 2014-15-0201-00026.
DOI: 10.6084/m9.figshare.5446519.v1
title: Acrylamide levels in potato crisps in Europe from 2002 to 2016

description: European manufacturers’ data on acrylamide in potato crisps from 2002 to 2016 were analysed. A previous study showed a 53% reduction in mean acrylamide levels from 763 ng g<sup>−1</sup> in 2002 to 358 ng g<sup>−1</sup> in 2011. Analysis of data from the longer period showed that since 2011 there has been a levelling off, with the mean level for 2016 being 412 ng g<sup>−1</sup> (still a 46% reduction from 2002), suggesting that the most effective acrylamide reduction measures had been devised and implemented by 2011. There were similar trends in the 90<sup>th</sup> and 95<sup>th</sup> quantile values, with the 90<sup>th</sup> quantile values being below 1000 ng g<sup>−1</sup> (the European Commission’s current ‘Indicative Value’ for acrylamide in potato crisps) since 2010. The proportion of samples with acrylamide above 2000 ng g<sup>−1</sup> fell from 4.8% in 2002 to 0.6% in 2016. Acrylamide levels showed marked seasonal variability, being highest in the first half of the year when potatoes were being used from storage, and lowest from July to September when potatoes were being harvested. Acrylamide levels were higher in thicker types of crisp in the early years of the study, but this difference disappeared in the later years, suggesting that manufacturers had acted to reduce acrylamide formation in these products. Higher values for acrylamide were recorded in north and east Europe than in the south and west up to 2013. Levels in the north and east declined in recent years, but remained higher in the north than in the other regions. The manufacturers’ data were compared with a much smaller dataset provided by the European Food Safety Authority (EFSA). Levels of acrylamide in the EFSA dataset were consistently higher than in the manufacturers’ data, possibly due to uneven sampling through the year and the seasonality of acrylamide levels.
DOI: 10.6084/m9.figshare.5446525.v1
title: Data for research article titled: "Lactobacillus rhamnosus PB01 (DSM 14870) supplementation affects markers of sperm kinematic parameters in a diet-induced obesity mice model"

description: Data for research article titled: "Lactobacillus rhamnosus PB01 (DSM 14870) supplementation affects markers of sperm kinematic parameters in a diet-induced obesity mice model".<br><br>Study was carried out in accordance with the “Guidelines for Animal Experimentation” and under approval of “The Danish Animal Experiments Inspectorate” no 2014-15-0201-00026.
DOI: 10.6084/m9.figshare.5446489
title: Transcriptome - Sphaerothecum destruens (rosette agent)

description: Reads are deposited in NCBI: https://www.ncbi.nlm.nih.gov/sra/SRX737879<br><br> Assembly in-home BGI to obtain Unigene (contigs)- ORF prediction using TransDecoder (Trinity plugin) and PfamScan to obtain coding sequences (CDS files) from transcripts (mRNA)- Protein translations are included (pep)<br>- clean.fasta: Assembly cleaned from cross-contamination of other species multiplexed (Corallochytrium limacisporum India, Ichthyophonus hoferi and Nutomonas longa) after applying CroCo V0.1.1 (Simion et al. in prep). It may contain bacterial contamination.<br><br><strong>Guifré Torruella, Alex de Mendoza, Xavier Grau-Bové, Meritxell Antó, </strong>Mark A. Chaplin<strong>, Javier del Campo, </strong>Laura Eme, Gregorio Pérez-Cordón, Christopher M. Whipps, Krista M. Nichols, Richard Paley, Andrew J. Roger, Ariadna Sitjà-Bobadilla, Stuart Donachie,<strong> and Iñaki Ruiz-Trillo. </strong>(2015)<br><em>Phylogenomics reveals convergent evolution of lifestyles in close relatives of animals and fungi.</em><br><strong><em>Current Biology </em></strong>25(18):2404-10.<br><br>www.multicellgenome.com
DOI: 10.6084/m9.figshare.12283805
title: Dataset of 282 residential 3D buildings generated using a hybrid evolution strategy

description: This dataset comprises of 282 residential 3D buildings in DXF format. The dataset includes single- and 2-storey family houses, 4-storey apartment buildings, and 8-storey apartment buildings.<br>Theses buildings were generated using EPSAP algorithm (see references for description on the generative design method).
DOI: 10.6084/m9.figshare.5446333
title: Fidelity to a motivational interviewing intervention for those with post-stroke aphasia: a small-scale feasibility study

description: <b>Objective:</b> Depression after stroke is common, and talk-based psychological therapies can be a useful intervention. While a third of stroke survivors will experience communication difficulties impeding participation in talk-based therapies, little guidance exists to guide delivery for those with aphasia. We need to understand how to adapt talk-based therapies in the presence of aphasia. This study aimed to explore the feasibility of motivational interviewing (MI) in people with post-stroke aphasia. <b>Methods:</b> In a small-scale feasibility study, consecutive patients admitted to an acute stroke ward were screened for eligibility. People with moderate to severe aphasia were eligible. Those consenting received an intervention consisting of up to eight MI sessions delivered twice per week over four weeks. Sessions were modified using aids and adaptations for aphasia. Session quality was measured using the Motivational Interviewing Skills Code (MISC) to assess MI fidelity. <b>Results:</b> Three consenting patients identified early post-stroke took part; one male and two females ages ranging between 40s and 80s. Participants attended between five and eight MI sessions over four weeks. Aids and adaptations included visual cues, rating scales, and modified reflections incorporating verbal and non-verbal behaviors. Sessions were tailored to individual participant need. Threshold MISC ratings could be achieved for all participants however, ratings were reduced when aids and adaptations were not used. <b>Discussion:</b> This small-scale feasibility study suggests that it is feasible to adapt MI for people with moderate to severe post-stroke aphasia. These findings merit further exploration of adapted MI as an intervention for this patient group.