cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14198180
title: Supplementary Material for: Calcium Signal Profiles in Vascular Endothelium from Cdh5-GCaMP8 and Cx40-GCaMP2 Mice

description: <b><i>Introduction:</i></b> Studies in Cx40-GCaMP2 mice, which express calcium biosensor GCaMP2 in the endothelium under connexin 40 promoter, have identified the unique properties of endothelial calcium signals. However, Cx40-GCaMP2 mouse is associated with a narrow dynamic range and lack of signal in the venous endothelium. Recent studies have proposed many GCaMPs (GCaMP5/6/7/8) with improved properties although their performance in endothelium-specific calcium studies is not known. <b><i>Methods:</i></b> We characterized a newly developed mouse line that constitutively expresses GCaMP8 in the endothelium under the VE-cadherin (Cdh5-GCaMP8) promoter. Calcium signals through endothelial IP3 receptors and TRP vanilloid 4 (TRPV4) ion channels were recorded in mesenteric arteries (MAs) and veins from Cdh5-GCaMP8 and Cx40-GCaMP2 mice. <b><i>Results:</i></b> Cdh5-GCaMP8 mice showed lower baseline fluorescence intensity, higher dynamic range, and higher amplitudes of individual calcium signals than Cx40-GCaMP2 mice. Importantly, Cdh5-GCaMP8 mice enabled the first recordings of discrete calcium signals in the intact venous endothelium and revealed striking differences in IP3 receptor and TRPV4 channel calcium signals between MAs and mesenteric veins. <b><i>Conclusion:</i></b> Our findings suggest that Cdh5-GCaMP8 mice represent significant improvements in dynamic range, sensitivity for low-intensity signals, and the ability to record calcium signals in venous endothelium.
DOI: 10.6084/m9.figshare.14198180.v1
title: Supplementary Material for: Calcium Signal Profiles in Vascular Endothelium from Cdh5-GCaMP8 and Cx40-GCaMP2 Mice

description: <b><i>Introduction:</i></b> Studies in Cx40-GCaMP2 mice, which express calcium biosensor GCaMP2 in the endothelium under connexin 40 promoter, have identified the unique properties of endothelial calcium signals. However, Cx40-GCaMP2 mouse is associated with a narrow dynamic range and lack of signal in the venous endothelium. Recent studies have proposed many GCaMPs (GCaMP5/6/7/8) with improved properties although their performance in endothelium-specific calcium studies is not known. <b><i>Methods:</i></b> We characterized a newly developed mouse line that constitutively expresses GCaMP8 in the endothelium under the VE-cadherin (Cdh5-GCaMP8) promoter. Calcium signals through endothelial IP3 receptors and TRP vanilloid 4 (TRPV4) ion channels were recorded in mesenteric arteries (MAs) and veins from Cdh5-GCaMP8 and Cx40-GCaMP2 mice. <b><i>Results:</i></b> Cdh5-GCaMP8 mice showed lower baseline fluorescence intensity, higher dynamic range, and higher amplitudes of individual calcium signals than Cx40-GCaMP2 mice. Importantly, Cdh5-GCaMP8 mice enabled the first recordings of discrete calcium signals in the intact venous endothelium and revealed striking differences in IP3 receptor and TRPV4 channel calcium signals between MAs and mesenteric veins. <b><i>Conclusion:</i></b> Our findings suggest that Cdh5-GCaMP8 mice represent significant improvements in dynamic range, sensitivity for low-intensity signals, and the ability to record calcium signals in venous endothelium.
DOI: 10.20351/29gd20080925
title: SESAME Cruise, RV García del Cid 

description: SESAME Cruise (29GD20080925) carried out on the Research Vessel García del Cid in 2008
DOI: 10.20351/29gd20080604
title: MPOCAT-2 Cruise, RV García del Cid

description: MPOCAT-2 Cruise (29GD20080604) carried out on the Research Vessel García del Cid in 2008
DOI: 10.20351/29gd20080906
title: EVENT-SHELF Cruise, RV García del Cid 

description: EVENT-SHELF Cruise (29GD20080906) carried out on the Research Vessel García del Cid in 2008
DOI: 10.5281/zenodo.4420394
title: Supplementary Dataset for "Extracting near-field seismograms from ocean-bottom pressure gauge inside the focal area: application to the 2011 Mw 9.1 Tohoku-Oki earthquake"

description: Datasets S1 contains the results obtained by the analysis in this study, such as the spatial and temporal configuration of the basis functions. Dataset S2 contains the ocean-bottom pressure gauge data used in this study. The manuscript is available at: https://agupubs.onlinelibrary.wiley.com/doi/10.1029/2020GL091664
description: {"references": ["Kubota, T., Saito, T., Tsushima, H., Hino, R., Ohta, Y., Suzuki S, & Inazu D. (2021). Extracting near-field seismograms from ocean-bottom pressure gauge inside the focal area: application to the 2011 Mw 9.1 Tohoku-Oki earthquake. Geophysical Research Letters, 48, e2020GL091664. https://doi.org/10.1029/2020GL091664"]}
DOI: 10.5281/zenodo.4420393
title: Supplementary Dataset for "Extracting near-field seismograms from ocean-bottom pressure gauge inside the focal area: application to the 2011 Mw 9.1 Tohoku-Oki earthquake"

description: Datasets S1 contains the results obtained by the analysis in this study, such as the spatial and temporal configuration of the basis functions. Dataset S2 contains the ocean-bottom pressure gauge data used in this study. The manuscript is available at: https://agupubs.onlinelibrary.wiley.com/doi/10.1029/2020GL091664
description: {"references": ["Kubota, T., Saito, T., Tsushima, H., Hino, R., Ohta, Y., Suzuki S, & Inazu D. (2021). Extracting near-field seismograms from ocean-bottom pressure gauge inside the focal area: application to the 2011 Mw 9.1 Tohoku-Oki earthquake. Geophysical Research Letters, 48, e2020GL091664. https://doi.org/10.1029/2020GL091664"]}
DOI: 10.20351/29gd20080509
title: NITROALBORAN Cruise, RV García del Cid

description: NITROALBORAN Cruise (29GD20080509) carried out on the Research Vessel García del Cid in 2008
DOI: 10.34740/kaggle/dsv/2012805
title: Contrastive Language Image Pretraining by openai
DOI: 10.20351/29gd20080929
title: PROMETEO-1 Cruise, RV García del Cid

description: PROMETEO-1 Cruise (29GD20080929) carried out on the Research Vessel García del Cid in 2008
DOI: 10.20351/29gd20080518
title: CANOA-08_NORTE Cruise, RV García del Cid

description: CANOA-08_NORTE Cruise (29GD20080518) carried out on the Research Vessel García del Cid in 2008
DOI: 10.20351/29gd20091005
title: DESMMON Cruise, RV García del Cid

description: DESMMON Cruise (29GD20091005) carried out on the Research Vessel García del Cid in 2009
DOI: 10.6084/m9.figshare.13507108.v1
title: A plot-based elevational assessment of species densities, life forms and leaf traits of seed plants in the south-eastern Himalayan biodiversity hotspot, North Myanmar

description: <b><i>Background</i></b>: Species density along elevation gradients often shows hump-shaped patterns, but in-depth data for Myanmar is still not available. <b><i>Aim</i></b>: The first plot-based study to detect the elevational patterns of life forms and tree leaf traits, and their relation to environmental factors in Myanmar. <b><i>Methods</i></b>: All seed plant species were recorded on 76 plots between 400 and 4100 m. Regression models were used to identify the variables with highest predictive power for species densities of different life forms and leaf traits. <b><i>Results</i></b>: Species density showed a linear elevational decline except for grasses (increase) and epiphytes (hump-shaped pattern) and were related to temperature and precipitation in all considered life forms. Tree leaf size, the proportion of species with simple leaves and leaves with drip tips decreased with elevation, while the proportion of toothed leaves increased. <b><i>Conclusions</i></b>: Our data partly confirm some widely held assumptions about elevation patterns in species density and leaf traits. While the climatic dependence behaves as expected, leaf traits and lifeforms show mixed and sometimes surprising patterns. Previous knowledge of these patterns is partly confirming, but highly scattered regionally, so our study performed in one region offers a rare opportunity towards a natural history image of a biodiversity hotspot..
DOI: 10.5281/zenodo.4595934
title: Compressed FTIR spectroscopy using low-rank matrix reconstruction

description: This dataset contains FTIR hyperspectral measurement and simulation data, as well as the correpsonding Python scripts, including scripts for producing the figures of the publication M. Marschall, A. Hornemann, G. Wübbeler, A. Hoehl, E. Rühl, B. Kästner, and C. Elster, "Compressed FTIR spectroscopy using low-rank matrix reconstruction," Opt. Express <strong>28</strong>, 38762 (2020). DOI: 10.1364/OE.404959 Abstract: Fourier transform infrared (FTIR) spectroscopy is a powerful technique in analytical chemistry. Typically, spatially distributed spectra of the substance of interest are conducted simultaneously using FTIR spectrometers equipped with array detectors. Scanning-based methods such as near-field FTIR spectroscopy, on the other hand, are a promising alternative providing higher spatial resolution. However, serial recording severely limits their application due to the long acquisition times involved and the resulting stability issues. We demonstrate that it is possible to significantly reduce the measurement time of scanning methods by applying the mathematical technique of low-rank matrix reconstruction. Data from a previous pilot study of Leishmania strains are analyzed by randomly selecting 5% of the interferometer samples. The results obtained for bioanalytical fingerprinting using the proposed approach are shown to be essentially the same as those obtained from the full set of data. This finding can significantly foster the practical applicability of high-resolution serial scanning techniques in analytical chemistry and is also expected to improve other applications of FTIR spectroscopy and spectromicroscopy.
description: Funding: European Metrology Programme for Innovation and Research (18HLT06RaCHy); Deutsche Forschungsgemeinschaft (EL 492/1-1, RU 420/13-1).
DOI: 10.5281/zenodo.4595933
title: Compressed FTIR spectroscopy using low-rank matrix reconstruction

description: This dataset contains FTIR hyperspectral measurement and simulation data, as well as the correpsonding Python scripts, including scripts for producing the figures of the publication M. Marschall, A. Hornemann, G. Wübbeler, A. Hoehl, E. Rühl, B. Kästner, and C. Elster, "Compressed FTIR spectroscopy using low-rank matrix reconstruction," Opt. Express <strong>28</strong>, 38762 (2020). DOI: 10.1364/OE.404959 Abstract: Fourier transform infrared (FTIR) spectroscopy is a powerful technique in analytical chemistry. Typically, spatially distributed spectra of the substance of interest are conducted simultaneously using FTIR spectrometers equipped with array detectors. Scanning-based methods such as near-field FTIR spectroscopy, on the other hand, are a promising alternative providing higher spatial resolution. However, serial recording severely limits their application due to the long acquisition times involved and the resulting stability issues. We demonstrate that it is possible to significantly reduce the measurement time of scanning methods by applying the mathematical technique of low-rank matrix reconstruction. Data from a previous pilot study of Leishmania strains are analyzed by randomly selecting 5% of the interferometer samples. The results obtained for bioanalytical fingerprinting using the proposed approach are shown to be essentially the same as those obtained from the full set of data. This finding can significantly foster the practical applicability of high-resolution serial scanning techniques in analytical chemistry and is also expected to improve other applications of FTIR spectroscopy and spectromicroscopy.
description: Funding: European Metrology Programme for Innovation and Research (18HLT06RaCHy); Deutsche Forschungsgemeinschaft (EL 492/1-1, RU 420/13-1).
DOI: 10.17632/7ydzcnm2rp.1
title: Data for: Hydrothermal alteration and hydrocarbon accumulations in ultra-deep carbonate reservoirs along a strike-slip fault system, Tarim Basin, NW China

description: Chemical charactoristics of deep reservoirs
DOI: 10.17632/br6zbyrvmn.1
title: Data for: A parameterized geometric fitting method for ellipse

description: The validity of the fitting algorithm is verified from four aspects
DOI: 10.5281/zenodo.4596004
title: Sulfur data from the Wind spacecraft for January 2014

description: The upload consists of a dataset from the Wind spacecraft. The data are Sulfur intensities in the 3.2-5.0 MeV/n energy channel from the EPACT instrument for January 2014. We also provide an IDL program to plot the data. The dataset is an ascii file in the format: Start time (year, month, day, hour), Stop time (year, month, day, hour), intensity, error. The first column should be ignored.
description: The data were used in Figure 4 of Brooks & Yardley (2021), Science Advances, 7, eabf0068. We are making them publicly available.
description: {"references": ["Brooks & Yardley (2021), Science Advances, 7, eabf0068"]}
DOI: 10.5281/zenodo.4596003
title: Sulfur data from the Wind spacecraft for January 2014

description: The upload consists of a dataset from the Wind spacecraft. The data are Sulfur intensities in the 3.2-5.0 MeV/n energy channel from the EPACT instrument for January 2014. We also provide an IDL program to plot the data. The dataset is an ascii file in the format: Start time (year, month, day, hour), Stop time (year, month, day, hour), intensity, error. The first column should be ignored.
description: The data were used in Figure 4 of Brooks & Yardley (2021), Science Advances, 7, eabf0068. We are making them publicly available.
description: {"references": ["Brooks & Yardley (2021), Science Advances, 7, eabf0068"]}
DOI: 10.6084/m9.figshare.14197841
title: EEG and observation dataset, and consent forms

description: This dataset contains as follows: an excel file and a zip file. <br>The excel file contains valence levels of 79 participants and observation data in Nangok-dong, Seoul, South Korea. EEG data were collected from 16th March to 20th May, 2018.<br>The zip file contains Research explanation and consent form template (Original document, Korean), Research consent form template (translated, English), and Research consent forms signed by participants.<br>
DOI: 10.6084/m9.figshare.14197841.v2
title: EEG and observation dataset, and consent forms

description: This dataset contains as follows: an excel file and a zip file. <br>The excel file contains valence levels of 79 participants and observation data in Nangok-dong, Seoul, South Korea. EEG data were collected from 16th March to 20th May, 2018.<br>The zip file contains Research explanation and consent form template (Original document, Korean), Research consent form template (translated, English), and Research consent forms signed by participants.<br>
DOI: 10.6084/m9.figshare.14197841.v1
title: EEG and observation dataset

description: This dataset contains as follows: an excel file and a zip file. <br>The excel file contains valence levels of 79 participants and observation data in Nangok-dong, Seoul, South Korea. EEG data were collected from 16th March to 20th May, 2018.<br>The zip file contains Research explanation and consent form template (Original document, Korean), Research consent form template (translated, English), and Research consent forms signed by participants.<br>
DOI: 10.5281/zenodo.4593192
title: NPTEL2020-Indian-English-Speech-Train-part18

description: English Speech Recognition dataset collected from NPTEL videos. For more information, check:<br> https://github.com/AI4Bharat/NPTEL2020-Indian-English-Speech-Dataset
DOI: 10.5281/zenodo.4593191
title: NPTEL2020-Indian-English-Speech-Train-part18

description: English Speech Recognition dataset collected from NPTEL videos. For more information, check:<br> https://github.com/AI4Bharat/NPTEL2020-Indian-English-Speech-Dataset
DOI: 10.5281/zenodo.4596081
title: Damage stratigraphy as a detachment mechanism controlling earthquake distribution and fault patterns

description: Three data files as supplemental information to the above manuscript, including: Strength profile in Sichuan basin; Tri-axial experimental results for drilling core samples of anhydrite and dolomite; Seismic analysis.
DOI: 10.5281/zenodo.4596080
title: Damage stratigraphy as a detachment mechanism controlling earthquake distribution and fault patterns

description: Three data files as supplemental information to the above manuscript, including: Strength profile in Sichuan basin; Tri-axial experimental results for drilling core samples of anhydrite and dolomite; Seismic analysis.
DOI: 10.20351/29gd20090313
title: CASCADES-2 Cruise, RV García del Cid

description: CASCADES-2 Cruise (29GD20090313) carried out on the Research Vessel García del Cid in 2009
DOI: 10.20351/29gd20080503
title: EDASMAR Cruise, RV García del Cid

description: EDASMAR Cruise (29GD20080503) carried out on the Research Vessel García del Cid in 2008
DOI: 10.20351/29gd20090915
title: OAMMS-2 Cruise, RV García del Cid 

description: OAMMS-2 Cruise (29GD20090915) carried out on the Research Vessel García del Cid in 2009
DOI: 10.20351/29gd20090921
title: INDEMARES-1 Cruise, RV García del Cid

description: INDEMARES-1 Cruise (29GD20090921) carried out on the Research Vessel García del Cid in 2009
DOI: 10.18112/openneuro.ds003505.v1.0.1
title: VEPCON: Source imaging of high-density visual evoked potentials with multi-scale brain parcellations and connectomes
DOI: 10.14278/rodare.838
title: Data (1/15) for: Analysen zur Anwendbarkeit verschiedener Strahlbahn-Monitoring-Konzepte für die ultraschnelle Röntgencomputertomografie

description: Simulationsdaten für die Masterarbeit <em>Analysen zur Anwendbarkeit verschiedener Strahlbahn-Monitoring-Konzepte für die ultraschnelle Röntgencomputertomografie</em> Daten für den ROFEX 3:<br> - Pos_17 bzw. Pos_19 wurden zur Bestimmung des Gleichungssystems Elektronenfluss(r, phi) verwendet<br> - groessenvgl diente dem Vergleich verschiedener USRBIN-Größen bei den ROFEX-3-Simulationen<br> - USRBIN70_Ro3 zeigte den Elektronenfluss an einer weiteren Detektorposition<br> - 66_21_Ro3 untersuchte einen leicht verschobenen USRBIN 66. Daten für den ROFEX 1:<br> -Ro1_USRBIN_gekippt wurde für den Vergleich von USRBINs mit unterschiedlichen Winkeln verwendet
DOI: 10.14278/rodare.837
title: Data (1/15) for: Analysen zur Anwendbarkeit verschiedener Strahlbahn-Monitoring-Konzepte für die ultraschnelle Röntgencomputertomografie

description: Simulationsdaten für die Masterarbeit <em>Analysen zur Anwendbarkeit verschiedener Strahlbahn-Monitoring-Konzepte für die ultraschnelle Röntgencomputertomografie</em> Daten für den ROFEX 3:<br> - Pos_17 bzw. Pos_19 wurden zur Bestimmung des Gleichungssystems Elektronenfluss(r, phi) verwendet<br> - groessenvgl diente dem Vergleich verschiedener USRBIN-Größen bei den ROFEX-3-Simulationen<br> - USRBIN70_Ro3 zeigte den Elektronenfluss an einer weiteren Detektorposition<br> - 66_21_Ro3 untersuchte einen leicht verschobenen USRBIN 66. Daten für den ROFEX 1:<br> -Ro1_USRBIN_gekippt wurde für den Vergleich von USRBINs mit unterschiedlichen Winkeln verwendet
DOI: 10.20351/29gd20090721
title: INDEMARES-0 Cruise, RV García del Cid

description: INDEMARES-0 Cruise (29GD20090721) carried out on the Research Vessel García del Cid in 2009
DOI: 10.5281/zenodo.4596131
title: Climate data and MaxEnt input files for How the African house gecko (Hemidactylus mabouia) conquered the world

description: This is the climate data and MaxEnt input file used in Agarwal et al. (2021; <strong>How the African house gecko (<em>Hemidactylus mabouia</em>) conquered the world)</strong>
DOI: 10.5281/zenodo.4596130
title: Climate data and MaxEnt input files for How the African house gecko (Hemidactylus mabouia) conquered the world

description: This is the climate data and MaxEnt input file used in Agarwal et al. (2021; <strong>How the African house gecko (<em>Hemidactylus mabouia</em>) conquered the world)</strong>
DOI: 10.20351/29gd20090903
title: PROMETEO-4 Cruise, RV García del Cid 

description: PROMETEO-4 Cruise (29GD20090903) carried out on the Research Vessel García del Cid in 2009
DOI: 10.20351/29gd20090627
title: PERFILMED-II Cruise, RV García del Cid

description: PERFILMED-II Cruise (29GD20090627) carried out on the Research Vessel García del Cid in 2009
DOI: 10.20351/29gd20091024
title: PROMETEO-5_BIOFUN-2 Cruise, RV García del Cid

description: PROMETEO-5_BIOFUN-2 Cruise (29GD20091024) carried out on the Research Vessel García del Cid in 2009
DOI: 10.20351/29gd20090222
title: PROMETEO-2 Cruise, RV García del cid

description: PROMETEO-2 Cruise (29GD20090222) carried out on the Research Vessel García del Cid in 2009
DOI: 10.20351/29gd20090712
title: MEDOUT-09 Cruise, RV García del Cid

description: MEDOUT-09 Cruise (29GD20090712) carried out on the Research Vessel García del Cid in 2009
DOI: 10.20351/29gd20090309
title: OAMMS-1 Cruise, RV García del Cid

description: OAMMS-1 Cruise (29GD20090309) carried out on the Research Vessel García del Cid in 2009
DOI: 10.20351/29gd20101018
title: PROMECA Cruise, RV García del Cid

description: PROMECA Cruise (29GD20101018) carried out on the Research Vessel García del Cid in 2010
DOI: 10.20351/29gd20100520
title: COSTEM-1 Cruise, RV García del Cid

description: COSTEM-1 Cruise (29GD20100520) carried out on the Research Vessel García del Cid in 2010
DOI: 10.20351/29gd20090311
title: OBSEA Cruise, RV García del Cid 

description: OBSEA Cruise (29GD20090311) carried out on the Research Vessel García del Cid in 2009
DOI: 10.20351/29gd20090506
title: PROMETEO-3 Cruise, RV García del Cid

description: PROMETEO-3 Cruise (29GD20090506) carried out on the Research Vessel García del Cid in 2009
DOI: 10.6084/m9.figshare.14198432
title: GLOBAL-LargeLakes-2018-2019

description: Using the MODIS 8-day surface reflectance data (MOD09Q1, MYD09Q1) from 2018 to 2019, we have produced the data set for the typical global lakes (including Poyang Lake, Aral Sea, Lake Victoria and Lake Venant, the Great Lakes, Lake Titicaca and Lake Eyre) with 500 m resolution every 8 days from 2014 to 2017 by using the spectral characteristics of water body. The data range of this data set is 1-46. 1 indicates that the area has been flooded for 8 days in a year, 2 indicates that the area has been flooded for 16 days in a year and 46 indicates that the area has been flooded for the whole year. Larger data value indicates more flooded days.
DOI: 10.6084/m9.figshare.14198432.v1
title: GLOBAL-LargeLakes-2018-2019

description: Using the MODIS 8-day surface reflectance data (MOD09Q1, MYD09Q1) from 2018 to 2019, we have produced the data set for the typical global lakes (including Poyang Lake, Aral Sea, Lake Victoria and Lake Venant, the Great Lakes, Lake Titicaca and Lake Eyre) with 500 m resolution every 8 days from 2014 to 2017 by using the spectral characteristics of water body. The data range of this data set is 1-46. 1 indicates that the area has been flooded for 8 days in a year, 2 indicates that the area has been flooded for 16 days in a year and 46 indicates that the area has been flooded for the whole year. Larger data value indicates more flooded days.
DOI: 10.5281/zenodo.4592954
title: PIC simulation data of Cassini during the grand finale

description: This is the simulation data used in the publication Zhang et al. (2021): Particle-In-Cell Simulations of the Cassini Spacecraft's Interaction with Saturn's Ionosphere during the Grand Finale. This article was accepted on 8th March 2021, and full details on these simulations can be found in this article.
DOI: 10.5281/zenodo.4592953
title: PIC simulation data of Cassini during the grand finale

description: This is the simulation data used in the publication Zhang et al. (2021): Particle-In-Cell Simulations of the Cassini Spacecraft's Interaction with Saturn's Ionosphere during the Grand Finale. This article was accepted on 8th March 2021, and full details on these simulations can be found in this article.
DOI: 10.5281/zenodo.4593195
title: NPTEL2020-Indian-English-Speech-Train-part19

description: English Speech Recognition dataset collected from NPTEL videos. For more information, check:<br> https://github.com/AI4Bharat/NPTEL2020-Indian-English-Speech-Dataset