cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/n43srxwdnm
title: ARSENY: A program for computing inelastic transitions via hidden crossings in one-electron atomic ion–ion collisions with classical description of nuclear motion

description: The ARSENY program is intended to compute cross-sections of inelastic transitions via hidden crossings upon slow one-electron atomic ion–ion collisions using the approximation of classical description of nuclear motion in the collision energy region E < 20 KeV/nucleon. Particular attention is paid to the calculation of the analytical properties of adiabatic potential energy curves of the two-center Coulomb problem for complex values of the internuclear distance. Complex branch points and hidden crossings are calculated and their significance for the dynamics of one-electron collisional systems is revealed. Benchmark calculations of cross sections for charge exchange, excitation, and ionization in slow He2++H(1s) collisions are presented and compared with experimental data.
DOI: 10.6084/m9.figshare.812619.v2
title: Zandra Rhodes Collections 1979-1987

description: This file was created from research undertaken for an article for the journal Costume and funded with support from the University for the Creative Arts.
DOI: 10.6084/m9.figshare.26828968.v3
title: CldNetV2 - 202212

description: Retrieval of all-day cloud property based on satellite remote sensing dataGithub page: https://github.com/metdai/PMD-CldNetV2
DOI: 10.17632/7h8t38yp9z
title: Radiotherapy practice simulation model

description: A Discrete Event Simulation patient flow model to improve understanding and operation of a radiotherapy practice.
DOI: 10.6084/m9.figshare.27050635.v1
title: Supplementary Material for: Spinal teratoma with recurrent epileptic episodes in adults: a case report

description: Introduction Spinal teratomas are rare, accounting for nearly 0.2-0.5% of all spinal tumors and 2% of all teratomas. Teratomas at the conus medullaris location do not inherently lead to epilepsy. However, potential epileptic seizures is caused when a teratoma ruptures and the chemical stimulation of teratoma components enter the dural sac.
Case presentation A 31-year-old Asian male patient suffering from epileptic onset and poor antiepileptic treatment was demonstrated. The spinal imaging examination was performed, and the patient suffered a space-occupying lesion within the conus medullaris related to spinal deformity, spinal embolism, etc. The autoimmune encephalitis spectrum revealed mGluR5 antibody IgG (+) 1:10 response. The patient stabilized after treatment with hormones and human immunoglobulin. Some hair and lipid droplets could be observed in the dural sac intraoperatively, and more hair and lipid-like material were present in the spinal cord. Postoperative pathology established the diagnosis as a conus medullaris teratoma in adults. Epileptic seizures stopped after surgery, and no additional seizures were reported during the 33-month follow-up period.
Conclusions Conus medullaris teratoma rupture in adults rarely causes epileptic seizures. For spinal deformity patients with unexplained epileptic symptoms, spinal MRI can be helpful in early diagnosis, and more appropriate treatment improves disease prognosis.
DOI: 10.6084/m9.figshare.3528140.v1
title: Appendix C. Detailed sampling and analytical methods for macroinvertebrate abundances at the end of the mesocosm experiment.

description: Detailed sampling and analytical methods for macroinvertebrate abundances at the end of the mesocosm experiment.
DOI: 10.17632/p4btx7kptd
title: Dataset to evaluate Energy and Environmental Burdens of Growing Industrial Hemp (Cannabis sativa L.) for Phytoremediation and Using the Contaminated Biomass as an Energy Resource

description: This dataset provides information related to the energy requirements (MJ of primary energy) and CO2e emissions of growing industrial hemp (Cannabis sativa L.) in two heavy metal contaminated sites and using contaminated biomass for bioenergy production under four supply chain scenarios. These data are available in Excel format titled “Dataset 
 Canopaes”. The Excel file contains 12 worksheets showing specific data of the analysis carried out and titled:
-	Field Inputs – this worksheet contains the data related to the inputs required for growing industrial hemp for phytoremediation purposes in two experimental sites (S1 and S2). The amount of fertilizers (kg ha-1), seeds (kg ha-1), diesel fuel (kg ha-1), machine power (kW) and working times (h) for each activity carried out at field level and per Hemp Supply Chain (HSC) scenario was reported.  
-	Field Outputs – contains the industrial hemp cultivation output for each experimental site and per HSC scenario.  This worksheet contains the production yields (kg ha-1) of each product harvested and the related dry matter content (DM). 
-	S1 and S2 – these worksheets show the cumulative energy demands, which are expressed as MJ of primary energy, and the GHG emissions, expressed as g CO2e, both per kg of industrial hemp dry matter harvested and per cultivation site.
-	SPP – shows the primary energy requirements and the related CO2e emissions of the activities related to the seed processing plant. 
-	ADP – this worksheet is associated with the data obtained from the valorization of residual industrial hemp straw and fresh industrial hemp biomass as feedstocks. Moreover, the worksheet contains data related to the energy expenditure of the pre-treatment activities, the specific methane produced and the amount of heat and electricity generated. 
-	BFPP -  includes the data from the Biomass-Fired Power Plant considering the combustion of residual industrial hemp straw, dried whole industrial hemp and dewatered digestates from the ADP (either from residual industrial hemp straw or industrial hemp silage). 
-	HSC1, HSC2, HSC3 and HSC4 – these worksheets contain the data related to each step of the hemp supply chain scenarios, where the cumulative energy demand (CED) and the Climate Change (CC) impacts are reported. Moreover, the amount of bioenergy produced and the avoided emissions (g CO2e) are reported per functional unit. 
-	EF – contains the energy equivalents and emission factors [3-10] used to assess the energy and environmental burdens of this study. In addition, the worksheet includes the decimal rated power of each activity carried out at the field level.   
This dataset is relevant to diverse users such as researchers, stakeholders and policymakers to develop further insight related to the sustainability of producing bioenergy from contaminated industrial hemp biomass.
DOI: 10.4121/14406134.v1
title: Real-world sales forecasting benchmark data - Extended version

description: This dataset contains two .csv files that can be used as a new benchmark data for the solving of real-world sales forecasting problem. All data are real and obtained experimentally in production environment in one of the biggest retail company in Bosnia and Herzegovina.The available data in this dataset are in period from 2014/03/01 to 2021/03/01. Data are aggregated on monthly basis for 50 top items of one very popular brand in 4 different organizational units.
DOI: 10.6084/m9.figshare.24859989.v1
title: STEM data

description: Data to support publication under peer review.
DOI: 10.17632/hxhbbm497d
title: PeruFoodNet - A Traditional Peruvian Food Dataset

description: PeruFoodNet is a dataset consisting of 4000 images of traditional Peruvian dishes. This dataset includes 40 different types of dishes, with 100 images for each dish. The objective of this dataset is to train deep learning models for the identification and classification of dishes, as well as the future inference of allergenic ingredients through a chatbot integrated into a social media platform. The collected images exhibit a variety of presentations, settings, angles, and lighting conditions, which will facilitate more effective learning.
DOI: 10.17632/rp3zjrwbxm
title: Dataset:  Ozonation and UV photolysis for removing anticancer drug residues from hospital wastewater

description: Data for Journal of Environmental Science and Health, Part A  - Toxic/Hazardous Substances and Environmental Engineering
DOI: 10.6084/m9.figshare.19111055.v1
title: FDTD simulation data for Optical Diffraction Tomography

description: This dataset contains 2D and 3D complex field sinograms for optical diffraction tomography created with finite-difference time domain simulations using Meep (http://ab-initio.mit.edu/wiki/index.php?title=Meep). The entire complex electric field data from the simulations would have amounted to &gt;2TB of data which is not easy to share and also contain a lot of redundant and uninteresting (for tomography at least) information. Most of these data were used in the ODTbrain paper (https://dx.doi.org/10.1186/s12859-015-0764-0). <br> <b>Data Structure</b> Each dataset is an HDF5 file (https://www.hdfgroup.org) that contains the simulation structure (the cell phantom), a background field (simulation without phantom), and a field for each rotational position of the phantom (sinogram). The fields are slices through the complex electrical field in the original simulation volume behind the phantom at the end of the simulation (supposedly steady state). The slice position is written as the HDF5 attribute “extraction focus distance [px]”. The slice position is important for the reconstruction, because the fields must be numerically refocused to the center of the simulation volume before reconstruction. The perfectly matched layer (PML) has already been cropped from the fields. Alongside each field, the source code of the Meep simulation and the standard-output of the compiled simulation are stored. You can also find the simulation templates in the ODTbrain repository at https://github.com/RI-imaging/ODTbrain/tree/master/misc. I recommend you to explore the files using HDFView (https://www.hdfgroup.org/downloads/hdfview/). <br> <b>Naming Scheme</b> I adopted the naming scheme of the original simulations. - The first part of the file name determines the dimension of the simulation. The larger “phantom_3d” files contain the 3D simulation sinograms. - “A” is the total number of angles for which simulations were performed. - “R” is the resolution (number of pixels per wavelength). - “T” is the total number of simulation steps performed. - “Nmed” is the refractive index (RI) of the medium surrounding the cell phantom. - “Ncyt” is the RI of the phantom’s cytoplasm. - “Nnuc” is the RI of the phantom’s nucleus. - “Nleo” is the RI of the phantom’s nucleolus. The final part of the file name indicates to which type of study the simulation belongs: - “angles”: varying the total number of acquisition angles - “step-count”: varying the total number of time steps - “refractive-index”: varying the internal RI values of the cell phantom - “size”: varying the size of the phantom <br> <b>Getting Started</b> I added two Python scripts “recon_2d.py” and “recon_3d.py” (tested with Python 3.9 on Ubuntu 22.04) that will allow you to obtain RI reconstructions from the 2D and 3D sinograms. For this to work, you will have to install the Python libraries imported in those scripts. Note that for the 3D data you can also use the graphical tool CellReel (https://github.com/RI-imaging/CellReel).<br>
DOI: 10.6084/m9.figshare.24460123.v1
title: <b>Topographic heterogeneity triggers complementary cascades that enhance ecosystem multifunctionality</b>

description: Dataset on intertidal community composition and cascading facilitation effects on multiple ecosystem functions. Data associated with Fairchild <i>et al.</i>, Topographic heterogeneity triggers multiple complementary cascades to exert cornerstone effects on ecosystem multifunctionality.
DOI: 10.17632/jk9tnbpp3z
title: panel_gas_stations

description: We share two data sets ready to read in CVS and STATA. The first one (panel_gas.cvs / panel_gas.dta) is an incomplete panel data that contains information of daily prices of gas stations located in Spain (labelled by the variable gid) with 1,888,507 observations. Gas stations that do not sell to the public, and those located in Canary and Balearic Islands are not included. The data include information about retail prices, pre-tax retail prices, day, month and year of the data extraction. It also includes Brent prices, and the brand of the gas station. The second file (geocoordinates.cvs / geocoordinates.dta) includes a cross section with the 8,080 gas stations that provides information of the brand, the longitude and latitude coordinates for the gas station and the geocoordinatates of the Spanish refineries. Data was daily extracted from the web site of Spanish Ministry of Industry, Energy and Tourism: http://geoportalgasolineras.es The data base can be used for analyzing firms pricing behavior focusing, for example, on asymmetric pricing, cartels or vertical integration, among other topics.
DOI: 10.17632/s7drmff227
title: Data for: The decoupling effect and driving factors of carbon footprints in megacities: the case study of Xi’an in western China
DOI: 10.6084/m9.figshare.13134647.v2
title: Biomarkers and Key Pathways in Atrial Fibrillation Associated with Mitral Valve Disease Identified by Multi-omics Study

description: The iTRAQ technology was used for the proteomics study: the plasma samples from 24 patients were divided into 6 groups (3 chronic atrial fibrillation group and 3 sinus rhythm group), each of these groups contained the plasma from 4 patients. In addition, plasma samples from 12 atrial fibrillation or 12 sinus rhythm patients were used as control groups, respectively.<br>
DOI: 10.6084/m9.figshare.21725435.v1
title: Integrating carbon stocks and landscape connectivity for nature-based climate solutions

description: This project aimed to integrate maps of terrestrial carbon stocks (Sothe et al. 2022) and landscape connectivity (Pither et al. 2021) in Ontario, Canada at 300m spatial resolution to identify areas important for nature-based climate solutions. This dataset contains 2 maps — one examining the overlap of current density estimates from circuit theory (proportional to the probability of animal movement), with forest carbon storage estimates (above-ground biomass, below-ground biomass, and dead plants) and the other current density with soil carbon storage estimates (0 - 1m depth). We used a bivariate mapping approach to identify important areas of overlap between current density and carbon layers. We calculated quantiles at 20% intervals for the current density, forest, and soil carbon layers and then reclassified cell values for each raster layer with a value of 1 - 5 based on which percentile range they fell within. We then overlapped the current density map with each carbon map to produce two bivariate maps for current density by forest carbon and current density by soil carbon. Cell values for the bivariate maps were calculated using all unique combinations of the two layers, which resulted in 25 different cell values (5 × 5 matrix). The data are rasters with values ranging from 1 - 25 representing a varying degree of importance for each layer. Please refer to the publication for detailed methodology.
DOI: 10.6084/m9.figshare.25295869.v1
title: Visium Myocardial tissue (heart) data [Kuppe et al.]

description: An AnnData object for the Visium myocardial tissue (heart) data from Kuppe et al.The Visium heart data [Kuppe et al., 2022] are available in the Zenodo data repository under https://zenodo.org/record/6578047
DOI: 10.17632/bj6k23bvsv
title: Data for: Revised chronostratigraphic framework for the Cretaceous Magallanes-Austral Basin, Última Esperanza Province, Chile

description: These appendix files provide information on U-Pb detrital zircon ages referenced in a revised manuscript that was submitted by Daniels et al. to the Journal of South American Earth Sciences. Appendix 1 outlines the mineral separation and LA-ICP-MS analysis protocols used in the study, while Appendix 2 includes the raw U-Pb age data (see XLS table), as well as information on the methods that were used to manipulate the data.
DOI: 10.6084/m9.figshare.14141015.v1
title: Genelist_Top 100 human genes up-regulated under hypoxic conditions

description: Top 100 human genes up-regulated under hypoxic conditions based on meta-analysis
DOI: 10.6084/m9.figshare.21277726.v1
title: Data from Oestradiol reduces female bill colour in a mutually ornamented bird

description: File includes bill colour metrics data, coordinates in tetrachromatic colorspace for the estimation of perceptual distances, and female blood oestradiol content
DOI: 10.17632/pvfp5zdswp
title: Data for: Crime Prevention in Urban Spaces through Environmental Design: A New Critical UK Perspective
DOI: 10.6084/m9.figshare.13250414.v1
title: Novel quasi absolute phase unwrapping algorithm for 3D optical measurement

description: Obtaining fringe order map accurately and quickly can achieve high-precision optical three-dimensional (3D) measurement. To retrieve the absolute phase map, this letter presents a novel quasi absolute phase unwrapping method based on N+1 step line-coded phase-shifting profilometry (LPSP). Fringe order can be determined easily from wrapped phase and the single-pixel binarized (SPB) line pattern, the error occurring at the previous points will not be propagated along the phase unwrapping path, which can effectively avoid error accumulation.
DOI: 10.6084/m9.figshare.21520605.v1
title: Mediterranean diet effects on vascular health and serum levels of adipokines and ceramides. A Randomized Trial

description: A randomized trial to evaluate the effect of a Mediterranean-style diet on vascular health indices such as endothelial function indices, serum lipid and ceramide plasma and some adipokine serum levels. <br>
DOI: 10.6084/m9.figshare.28560743.v1
title: <b>ASSESSING VULNERABILITY OF EASTERN NORTH AMERICAN LANDBIRDS TO CLIMATE AND LAND USE CHANGE</b>

description: ABSTRACT:<br><br>Biodiversity is declining at an alarming rate due to anthropogenic changes in both climate and land use, among other factors. Few studies have analyzed the risk of both land use change and climate change together across a wide taxonomic group and geographic area. We use publicly available eBird data and align it with projections of climate and land use change over the course of the next century in an effort to quantify the vulnerability of 218 species of landbirds in the Eastern United States. We find considerable variation across species in their risk to changes in both climate and land use, with substantially higher vulnerability projected under the most pessimistic emissions scenario. Northern species and species occupying forest and grassland habitats face the highest risks from climate change, while species associated with marshes and urban habitat face higher risks of land use change. Spatial patterns of community-wide vulnerability to climate change and to land use change were closely linked and likely driven by biodiversity despite differences in affected species, highlighting the importance of targeting biodiversity hotspots for protection rather than focusing solely on the areas which are going to be affected the most severely by either climate change or land conversion.
DOI: 10.6084/m9.figshare.28915925.v1
title: data

description: This folder includes shapefiles, geodatabases, and other files essential for conducting Red List assessments of small mammal species as part of the IUCN Small Mammal Specialist Group (SMSG) initiative.The data is organized into subfolders to match the structure expected by the scripts and functions in the repository. Users can download and unzip this archive locally to reproduce the analyses or build upon the assessments.
DOI: 10.17632/2p95snw4k6
title: Data for: The OEN mixture model for the joint distribution of wind speed and direction

description: This data set contains the supplementary information for the above titled paper in Energy Conversion & Management, 191 (2019), 141-158. This includes the file "OEN by Koppen class.PDF" containing the observed and model joint and marginal probability density charts and the OEN model parameters for all 128 stations. It also includes a folder containing the R script and Rdata files to reproduce these charts and allow direct access to the data for further analysis.
DOI: 10.17632/jjfmp6nv4b
title: Comparing morphological and molecular estimates of species diversity in the freshwater genus Synura (Stramenopiles): a model for understanding diversity of eukaryotic microorganisms.

description: Multiple alignments of the nuclear ITS rDNA, SSU rDNA and LSU rDNA, plastid rbcL, psaA and LSU rDNA, and mitochondrial coxI loci sequences built either manually in MEGA6 or using MAFFT v6, applying the Q-INS-i strategy. In more variable loci alignments, those positions included in subsequent evolutionary analyses are indicated by mask.
DOI: 10.6084/m9.figshare.23666802.v3
title: The coordinates of Fig. 8 and Fig. 9

description: To facilitate readers' comparisons, we have provided the feasible domain coordinates of Fig. 8 and Fig. 9 to provide a clearer description of these two figures.
DOI: 10.17632/w8rt2y9cw3
title: Dataset_Machado2021

description: Datasets related to Machado et al., 2021. Atmosphere.
DOI: 10.6084/m9.figshare.12611642.v1
title: Gene database of Citrobacter rodentium ICC168

description: <i>Citrobacter rodentium</i> is a mucosal pathogen of mice, but it shares many similarities in pathogenic mechanisms with enteropathogenic <i>Escherichia coli</i>. Thus, it is a useful model for studying human gastrointestinal diseases including Crohn’s disease. Whole-genome sequencing technologies have been deployed in understanding the genetic repertoire endowed in <i>C. rodentium</i> that results in disease. In particular, Type III secretion system in the bacterium emerged as the major conduit for the secretion of pathogenic effectors. This resource sought to provide the genetic repertoire of <i>C. rodentium</i> ICC168 by parsing its annotated genome sequence downloaded from Genbank. Through an in-house MATLAB software, the gene name, gene function and gene sequence of all genes in the genome of <i>C. rodentium</i> are constituted into a gene database available for download as an Excel file. Collectively, the presented gene database should provide fundamental knowledge that could guide efforts to postulate useful hypothesis regarding the pathogenesis mechanisms of <i>C. rodentium</i>, as well as serve as the basis for genome editing efforts to construct loss-of-function mutants for studying the effects of particular gene in detail.
DOI: 10.60893/figshare.pof.28139363.v1
title: Spplementary material

description: Supplementary online material with additional information
DOI: 10.17632/j2mk79v2zn
title: Self-Efficacy and Psychological Well-Being

description: This is the data of 148 participants of demographic details (age, gender, and history of any physical/mental illness/disability), Generalised Self-Efficacy Scale, Life Orientation Scale-Revised, and Psychological Well-Being Scale. The scores on all three scales are indicator wise entered.
DOI: 10.17632/sszb6hxjw2
title: Efficacy and safety of SYSA1902 versus reference ustekinumab in moderate-to-severe plaque psoriasis: a multicenter, randomized, phase III study

description: Supplementary Appendix