cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7223609
title: Table 2.2. Rock-Eval- & TOC/CNS Analysis

description: Rock-Eval- & TOC/CNS Analysis
DOI: 10.7284/128799
title: Gyrocompass data collected during research cruise SP1714 using a Furuno Furuno SC-30 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7223609.v1
title: Table 2.2. Rock-Eval- & TOC/CNS Analysis

description: Rock-Eval- & TOC/CNS Analysis
DOI: 10.6084/m9.figshare.7223591
title: Table 2.1. Rock-Eval- & TOC/CNS Analysis and Palynofacies analysis & Optical kerogen analysis

description: Rock-Eval- & TOC/CNS Analysis and Palynofacies analysis & Optical kerogen analysis
DOI: 10.6084/m9.figshare.7223612.v2
title: Groundwater geochemistry data in Jianghan Plain, China

description: Long-term (1992-2014) groundwater geochemistry data (in mg/L except pH; n.d. represents value lower than the detection limit) in Jianghan Plain by the Geological Environmental Center of Hubei Province, China used in: Yang J., Ye M., Tang Z., Song X., & Pei Y. (2018). A Cluster-Based Method for Understanding Spatial and Temporal Patterns and Controlling Factors of Groundwater Geochemistry in a Regional Aquifer. (Unpublished)
DOI: 10.7284/128798
title: Meteorological Station data collected during research cruise SP1714 using a SIO MET-System instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7223591.v1
title: Table 2.1. Rock-Eval- & TOC/CNS Analysis and Palynofacies analysis & Optical kerogen analysis

description: Rock-Eval- & TOC/CNS Analysis and Palynofacies analysis & Optical kerogen analysis
DOI: 10.6084/m9.figshare.7223612.v3
title: Groundwater geochemistry data in Jianghan Plain, China

description: Long-term (1992-2014) groundwater geochemistry data (in mg/L except pH; n.d. represents value lower than the detection limit) in Jianghan Plain by the Geological Environmental Center of Hubei Province, China used in: Yang J., Ye M., Tang Z., Song X., & Pei Y. (2018). A Cluster-Based Method for Understanding Spatial and Temporal Patterns and Controlling Factors of Groundwater Geochemistry in a Regional Aquifer. (Unpublished)
DOI: 10.7284/128797
title: Winch data collected during research cruise SP1714 using a Markey DEYSH-3 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7223612.v4
title: Groundwater geochemistry data in Jianghan Plain, China

description: Long-term (1992-2014) groundwater geochemistry data (in mg/L except pH; n.d. represents value lower than the detection limit) in Jianghan Plain by the Geological Environmental Center of Hubei Province, China used in: Yang J., Ye M., Tang Z., Song X., & Pei Y. (2018). A Cluster-Based Method for Understanding Spatial and Temporal Patterns and Controlling Factors of Groundwater Geochemistry in a Regional Aquifer. (Unpublished)
DOI: 10.6084/m9.figshare.7223585
title: Table 1. Optical Maturation Analysis: Vitrinite Reflectance and Spore Colour Index

description: Optical Maturation Analysis: Vitrinite Reflectance and Spore Colour Index
DOI: 10.7284/128805
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SP1715 using a Hawaii UHDAS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7223585.v1
title: Table 1. Optical Maturation Analysis: Vitrinite Reflectance and Spore Colour Index

description: Optical Maturation Analysis: Vitrinite Reflectance and Spore Colour Index
DOI: 10.6084/m9.figshare.7223612.v5
title: GW_GeochmData

description: Long-term (1992-2014) groundwater geochemistry data (in mg/L except pH; n.d. represents value lower than the detection limit) in Jianghan Plain by the Geological Environmental Center of Hubei Province, China used in: Yang J., Ye M., Tang Z., Song X., & Pei Y. (2018). A Cluster-Based Method for Understanding Spatial and Temporal Patterns and Controlling Factors of Groundwater Geochemistry in a Regional Aquifer. (Unpublished)
DOI: 10.7284/128813
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise SP1715 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128809
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1715 using a Garmin GPS-17HVS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128810
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1715 using a Ashtech ADU2 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128811
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1715 using a Furuno GP-90D instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7223468.v1
title: dzwonecznik_FINAL.pdf

description: Management plan of the Lady Slipper orchid in Poland.
DOI: 10.7284/128812
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1715 using a Furuno GP-150 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128808
title: Gyrocompass data collected during research cruise SP1715 using a Furuno Furuno SC-30 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128807
title: Meteorological Station data collected during research cruise SP1715 using a SIO MET-System instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7223402
title: reproducibility and anatomical validation by ultrasound of manual examination procedure of the cervical spine: A clinical manual examination procedure to target interventional pain treatment

description: The data provided are the scans of the record cards used by the two investigators to indicate the level of cervical facet joint pain:m = manual examinationus = ultrasound examination
DOI: 10.6084/m9.figshare.7223402.v1
title: reproducibility and anatomical validation by ultrasound of manual examination procedure of the cervical spine: A clinical manual examination procedure to target interventional pain treatment

description: The data provided are the scans of the record cards used by the two investigators to indicate the level of cervical facet joint pain:m = manual examinationus = ultrasound examination
DOI: 10.7284/128806
title: Winch data collected during research cruise SP1715 using a Markey DEYSH-3 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7223348
title: Processed and un-processed contiguous axial MRI data of the lower leg obtained from 21-31 and 66-79 year old subjects

description: This dataset presents contiguous axial magnetic resonance imaging (MRI) data captured from the lower left legs of twelve 21-31 year old (young) and twelve 66-79 year old (old) healthy adult male and female participants.Data were collected using a General Electric 1.5T Signa EchoSpeed Plus MRI system, with the following parameters:- Phased-array coil<br>- T1-weighted spin echo sequence<br>- 4mm slice thickness<br>- 400ms repetition time<br>- 11ms echo time- 512 x 512 pixel resolution- 30cm field of view<br><br>Data are provided as MATLAB binary files produced from the raw DICOM files obtained from the MRI instrument. These files duplicate the DICOM image data but remove any identifying patient data to protect participant privacy. Each file contains a 512 x 512 x n<sub>s </sub>matrix of 16-bit integers representing grayscale pixel intensities, where n<sub>s </sub>is the number of slices.<br>Filenames are given in the format <b>XXN_MRI_Data_Combined.mat</b>, where <b>XX</b> is the group identifier (<b>OF</b>: old female; <b>OM</b>: old male; <b>YF</b>: young female; <b>YM</b>: young male) and <b>N</b> is the subject number (<b>1-6</b>).<br>Also provided are output files for each MATLAB binary processed with the software shared with this dataset (https://doi.org/10.6084/m9.figshare.7223357). These include muscle boundary identification, tissue segmentation, and cross-sectional area calculations. The naming format for these files is <b>XXN_MRI_Data_Combined_Output.mat</b>, using the conventions as above. Full details of the variables contained in these files can be found in <b>Output_Variables_Description.pdf</b>.
DOI: 10.6084/m9.figshare.7223357
title: A MATLAB program for the viewing, outlining, segmentation and analysis of muscle MRI data

description: A custom MATLAB program developed to work with the MRI image dataset also provided as a part of this dataset (https://doi.org/10.6084/m9.figshare.7223348). This software allows users to view the MRI images, identify muscle cross-sectional areas, separate contractile and non-contractile tissue, and to calculate the muscle volumes and visualize them in 3D.<br>This program is compatible with MATLAB R2018a.<br>Full details on usage can be found in <b>User_Guide.pdf</b>
DOI: 10.6084/m9.figshare.7223348.v1
title: Processed and un-processed contiguous axial MRI data of the lower leg obtained from 21-31 and 66-79 year old subjects

description: This dataset presents contiguous axial magnetic resonance imaging (MRI) data captured from the lower left legs of twelve 21-31 year old (young) and twelve 66-79 year old (old) healthy adult male and female participants.Data were collected using a General Electric 1.5T Signa EchoSpeed Plus MRI system, with the following parameters:- Phased-array coil<br>- T1-weighted spin echo sequence<br>- 4mm slice thickness<br>- 400ms repetition time<br>- 11ms echo time- 512 x 512 pixel resolution- 30cm field of view<br><br>Data are provided as MATLAB binary files produced from the raw DICOM files obtained from the MRI instrument. These files duplicate the DICOM image data but remove any identifying patient data to protect participant privacy. Each file contains a 512 x 512 x n<sub>s </sub>matrix of 16-bit integers representing grayscale pixel intensities, where n<sub>s </sub>is the number of slices.<br>Filenames are given in the format <b>XXN_MRI_Data_Combined.mat</b>, where <b>XX</b> is the group identifier (<b>OF</b>: old female; <b>OM</b>: old male; <b>YF</b>: young female; <b>YM</b>: young male) and <b>N</b> is the subject number (<b>1-6</b>).<br>Also provided are output files for each MATLAB binary processed with the software shared with this dataset (https://doi.org/10.6084/m9.figshare.7223357). These include muscle boundary identification, tissue segmentation, and cross-sectional area calculations. The naming format for these files is <b>XXN_MRI_Data_Combined_Output.mat</b>, using the conventions as above. Full details of the variables contained in these files can be found in <b>Output_Variables_Description.pdf</b>.
DOI: 10.6084/m9.figshare.7223357.v1
title: A MATLAB program for the viewing, outlining, segmentation and analysis of muscle MRI data

description: A custom MATLAB program developed to work with the MRI image dataset also provided as a part of this dataset (https://doi.org/10.6084/m9.figshare.7223348). This software allows users to view the MRI images, identify muscle cross-sectional areas, separate contractile and non-contractile tissue, and to calculate the muscle volumes and visualize them in 3D.<br>This program is compatible with MATLAB R2018a.<br>Full details on usage can be found in <b>User_Guide.pdf</b>
DOI: 10.7284/128814
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise SP1716 using a Hawaii UHDAS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7223285
title: Supplementary Material for: Differences in the Efficacies of Pazopanib and Gemcitabine/Docetaxel as Second-Line Treatments for Metastatic Soft Tissue Sarcoma

description: <b><i>Background:</i></b> We retrospectively investigated the treatment outcomes of second-line treatment with pazopanib or gemcitabine/docetaxel in patients with advanced soft tissue sarcoma (STS). <b><i>Methods:</i></b> Ninety-one patients who were treated with pazopanib or gemcitabine/docetaxel for advanced STS between 1995 and 2015 were analyzed. <b><i>Results:</i></b> Forty-six and 45 patients received pazopanib and gemcitabine/docetaxel, respectively. The median progression-free survival for the group treated with pazopanib was 4.5 months compared with 3.0 months for the gemcitabine/docetaxel group (<i>p</i> = 0.593). The median overall survival for the group treated with pazopanib was 12.6 months compared with 14.2 months for the gemcitabine/docetaxel group (<i>p</i> = 0.362). The overall response rates (ORRs) were 6.5 and 26.7% in the pazopanib and gemcitabine/docetaxel groups, respectively. The following parameters had ORRs favoring gemcitabine/docetaxel: age ≥50 years (31.6 vs. 2.9%, <i>p</i> = 0.006), histologic grade 1–2 (40.9 vs. 0%, <i>p</i> = 0.001), and poor first-line treatment response (23.3 vs. 3.0%, <i>p</i> = 0.022). Gemcitabine/docetaxel was associated with better ORRs for the following histologic subtypes: leiomyosarcoma (<i>p</i> = 0.624), malignant fibrous histiocytoma/undifferentiated pleomorphic sarcoma (<i>p</i> = 0.055), and angiosarcoma (<i>p</i> = 0.182). However, the ORR of synovial sarcoma favored pazopanib (<i>p</i> = 0.99). <b><i>Conclusions:</i></b> The efficacies of pazopanib and gemcitabine/docetaxel as second-line treatments after doxorubicin or ifosfamide failure differed among clinical and histologic subgroups and appeared to facilitate a more personalized treatment approach for advanced STS.
DOI: 10.7284/128819
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1716 using a Garmin GPS-17HVS instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7223285.v1
title: Supplementary Material for: Differences in the Efficacies of Pazopanib and Gemcitabine/Docetaxel as Second-Line Treatments for Metastatic Soft Tissue Sarcoma

description: <b><i>Background:</i></b> We retrospectively investigated the treatment outcomes of second-line treatment with pazopanib or gemcitabine/docetaxel in patients with advanced soft tissue sarcoma (STS). <b><i>Methods:</i></b> Ninety-one patients who were treated with pazopanib or gemcitabine/docetaxel for advanced STS between 1995 and 2015 were analyzed. <b><i>Results:</i></b> Forty-six and 45 patients received pazopanib and gemcitabine/docetaxel, respectively. The median progression-free survival for the group treated with pazopanib was 4.5 months compared with 3.0 months for the gemcitabine/docetaxel group (<i>p</i> = 0.593). The median overall survival for the group treated with pazopanib was 12.6 months compared with 14.2 months for the gemcitabine/docetaxel group (<i>p</i> = 0.362). The overall response rates (ORRs) were 6.5 and 26.7% in the pazopanib and gemcitabine/docetaxel groups, respectively. The following parameters had ORRs favoring gemcitabine/docetaxel: age ≥50 years (31.6 vs. 2.9%, <i>p</i> = 0.006), histologic grade 1–2 (40.9 vs. 0%, <i>p</i> = 0.001), and poor first-line treatment response (23.3 vs. 3.0%, <i>p</i> = 0.022). Gemcitabine/docetaxel was associated with better ORRs for the following histologic subtypes: leiomyosarcoma (<i>p</i> = 0.624), malignant fibrous histiocytoma/undifferentiated pleomorphic sarcoma (<i>p</i> = 0.055), and angiosarcoma (<i>p</i> = 0.182). However, the ORR of synovial sarcoma favored pazopanib (<i>p</i> = 0.99). <b><i>Conclusions:</i></b> The efficacies of pazopanib and gemcitabine/docetaxel as second-line treatments after doxorubicin or ifosfamide failure differed among clinical and histologic subgroups and appeared to facilitate a more personalized treatment approach for advanced STS.
DOI: 10.7284/128820
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1716 using a Ashtech ADU2 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128821
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1716 using a Furuno GP-90D instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7223243
title: Supplementary Material for: Beam Walking to Assess Dynamic Balance in Health and Disease: A Protocol for the “BEAM” Multicenter Observational Study

description: <b><i>Background:</i></b> Dynamic balance keeps the vertical projection of the center of mass within the base of support while walking. Dynamic balance tests are used to predict the risks of falls and eventual falls. The psychometric properties of most dynamic balance tests are unsatisfactory and do not comprise an actual loss of balance while walking. <b><i>Objectives:</i></b> Using beam walking distance as a measure of dynamic balance, the BEAM consortium will determine the psychometric properties, lifespan and patient reference values, the relationship with selected “dynamic balance tests,” and the accuracy of beam walking distance to predict falls. <b><i>Methods:</i></b> This cross-sectional observational study will examine healthy adults in 7 decades (<i>n</i> = 432) at 4 centers. Center 5 will examine patients (<i>n</i> = 100) diagnosed with Parkinson’s disease, multiple sclerosis, stroke, and balance disorders. In test 1, all participants will be measured for demographics, medical history, muscle strength, gait, static balance, dynamic balance using beam walking under single (beam walking only) and dual task conditions (beam walking while concurrently performing an arithmetic task), and several cognitive functions. Patients and healthy participants age 50 years or older will be additionally measured for fear of falling, history of falls, miniBESTest, functional reach on a force platform, timed up and go, and reactive balance. All participants age 50 years or older will be recalled to report fear of falling and fall history 6 and 12 months after test 1. In test 2, seven to ten days after test 1, healthy young adults and age 50 years or older (<i>n</i> = 40) will be retested for reliability of beam walking performance. <b><i>Conclusion:</i></b> We expect to find that beam walking performance vis-à-vis the traditionally used balance outcomes predicts more accurately fall risks and falls. <b><i>Clinical Trial Registration Number:</i></b> NCT03532984.
DOI: 10.7284/128822
title: GNSS (Global Navigation Satellite System) data collected during research cruise SP1716 using a Furuno GP-150 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7223243.v1
title: Supplementary Material for: Beam Walking to Assess Dynamic Balance in Health and Disease: A Protocol for the “BEAM” Multicenter Observational Study

description: <b><i>Background:</i></b> Dynamic balance keeps the vertical projection of the center of mass within the base of support while walking. Dynamic balance tests are used to predict the risks of falls and eventual falls. The psychometric properties of most dynamic balance tests are unsatisfactory and do not comprise an actual loss of balance while walking. <b><i>Objectives:</i></b> Using beam walking distance as a measure of dynamic balance, the BEAM consortium will determine the psychometric properties, lifespan and patient reference values, the relationship with selected “dynamic balance tests,” and the accuracy of beam walking distance to predict falls. <b><i>Methods:</i></b> This cross-sectional observational study will examine healthy adults in 7 decades (<i>n</i> = 432) at 4 centers. Center 5 will examine patients (<i>n</i> = 100) diagnosed with Parkinson’s disease, multiple sclerosis, stroke, and balance disorders. In test 1, all participants will be measured for demographics, medical history, muscle strength, gait, static balance, dynamic balance using beam walking under single (beam walking only) and dual task conditions (beam walking while concurrently performing an arithmetic task), and several cognitive functions. Patients and healthy participants age 50 years or older will be additionally measured for fear of falling, history of falls, miniBESTest, functional reach on a force platform, timed up and go, and reactive balance. All participants age 50 years or older will be recalled to report fear of falling and fall history 6 and 12 months after test 1. In test 2, seven to ten days after test 1, healthy young adults and age 50 years or older (<i>n</i> = 40) will be retested for reliability of beam walking performance. <b><i>Conclusion:</i></b> We expect to find that beam walking performance vis-à-vis the traditionally used balance outcomes predicts more accurately fall risks and falls. <b><i>Clinical Trial Registration Number:</i></b> NCT03532984.
DOI: 10.6084/m9.figshare.7223231.v1
title: STR Data-Uyghur.xlsx

description: The complex topography of Xinjiang Uyghur Autonomous Region of China with three major mountains and two basins has hindered large-scale human migrations, admixture and assimilation. Essentially, the specific history and population structure of Uyghurs in Xinjiang has remained a matter of contention for a long time. Here, we explored the genetic history of the Uyghurs (n=546) from 5 geographical regions using 27 Y-STR markers.Population structure analysis supported the Uyghurs were genetically closer to Central Asian than other populations. We also observed slight difference between northern Xinjiang and southern Xinjiang. We unveiled a more complex genetic structure and ancestral admixture history of Uyghurs, which suggested early human activities happening in Xinjiang. <br>
DOI: 10.7284/128818
title: Gyrocompass data collected during research cruise SP1716 using a Furuno Furuno SC-30 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128817
title: Meteorological Station data collected during research cruise SP1716 using a SIO MET-System instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/128816
title: Winch data collected during research cruise SP1716 using a Markey DEYSH-3 instrument system onboard the platform RV Robert Gordon Sproul

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7223168
title: Code & Data for The role of parasitism in the energy management of a free-ranging bird.

description: Code and data for the analyses in the publication entitled 'The role of parasitism in the energy management of a free-ranging bird' http://dx.doi.org/10.1242/jeb.190066
DOI: 10.6084/m9.figshare.7223168.v1
title: Code & Data for The role of parasitism in the energy management of a free-ranging bird.

description: Code and data for the analyses in the publication entitled 'The role of parasitism in the energy management of a free-ranging bird' http://dx.doi.org/10.1242/jeb.190066