cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13935258
title: Single-cell and TCR sequencing analysis of peripheral blood mononuclear cells from Duchenne muscular dystrophy patients before and after dosing with AAV9 mini-dystrophin

description: We used single-cell RNA sequencing and T cell receptor (TCR) sequencing on peripheral blood mononuclear cells from five patients with Duchenne muscular dystrophy before and after dosing with PF-06939926 fordadistrogene movaparvovec. Included in this repository are the following:

    SS_MS_DMD_AAV_integrated.rds is a Seurat object containing single-cell gene expression for pre and post time points from all subjects. TCR information is included in the metadata slot.

Supplemental Data File 1 PostvsPre_DEG_tables_ANNOTATED by_cell_type.xlsx contains the differentially expressed genes between the pre and post time points by immune cell population.

MS_DMD_all_conga_final.h5ad is an AnnData object containing the final output of the CoNGA analysis. Results of the analysis are stored in adata.uns['conga_results']. See the github page for more information on the data structure: CoNGA github
DOI: 10.15468/dl.whgwmb
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Carabodes marginatus (Michael, 1884)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 84 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015881-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gqyz7k
title: Occurrence Download

description: A dataset listing the 4522 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Cuba",
 "TaxonKey is Insecta"
 ]
}

 The dataset's 4522 records were derived from 275 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015843-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7gw5ky
title: Occurrence Download

description: A dataset containing 130172 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fratercula arctica (Linnaeus, 1758)",
 "Year 2000-2024"
 ]
}

 The dataset includes 130172 records from 208 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015777-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n2hr5d
title: Occurrence Download

description: A dataset containing 83053 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cypripedium calceolus L."
 ]
}

 The dataset includes 83053 records from 485 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015882-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q42d5q
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Cepheus cepheiformis (Nicolet, 1855)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 83 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015883-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gh4zdp
title: Occurrence Download

description: A dataset containing 735413 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "StateProvince is La Guajira"
 ]
}

 The dataset includes 735413 records from 340 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015835-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.264u25
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Tectocepheus alatus Berlese, 1913",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015885-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9w8kz6
title: Occurrence Download

description: A dataset containing 9225 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Graphis Adans., 1763"
 ]
}

 The dataset includes 9225 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015884-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tvww8q
title: Occurrence Download

description: A dataset containing 1291 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is BRA.5.396_2",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 1291 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015886-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.438d3x
title: Occurrence Download

description: A dataset containing 1530 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Tectocepheus velatus (Michael, 1880)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 1530 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015887-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3s4yaw
title: Occurrence Download

description: A dataset containing 13982 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coris julis (Linnaeus, 1758)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Specimen, Material sample)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 13982 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002213-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k7a6ka
title: Occurrence Download

description: A dataset containing 11167 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Doradidae",
 "Continent is one of (North America, South America)"
 ]
}

 The dataset includes 11167 records from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016628-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sbfhrk
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scutiger maculatus (Liu, 1950)"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0300973-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.scm6v2
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Selago decipiens E.Mey."
 ]
}

 The dataset includes 82 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033889-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.epx2am
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "TaxonKey is one of (Allium burdickii (Hanes) A.G.Jones, Allium tricoccum var. burdickii Hanes)"
 ]
}

 The dataset includes 70 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0233824-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ah2yu6
title: Occurrence Download

description: A dataset containing 253766 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ictaluridae",
 "Continent is one of (North America, South America)"
 ]
}

 The dataset includes 253766 records from 172 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016642-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sxkx6b
title: Occurrence Download

description: A dataset containing 128 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Parambassis wolffii (Bleeker, 1850)"
 ]
}

 The dataset includes 128 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0329037-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.54cagp
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caladenia splendens Hopper & A.P.Br."
 ]
}

 The dataset includes 85 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112064-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xuybdk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Crepidodera aurata (Marsham, 1802)",
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 },
 {
 "or" : [
 "Country is United States of America",
 "Country is United States",
 "Country is United States of America",
 "Country is Canada",
 "Continent is North America"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0369374-210914110416597/datasets/export for details.
DOI: 10.15468/dl.cnx6ez
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boana gracilis (Melin, 1941)"
 ]
}

 The dataset's 1 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015190-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.98pcdg
title: Occurrence Download

description: A dataset containing 135 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caladenia sigmoidea R.S.Rogers"
 ]
}

 The dataset includes 135 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112055-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jyv3cu
title: Occurrence Download

description: A dataset containing 317 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vampyrum spectrum (Linnaeus, 1758)"
 ]
}

 The dataset includes 317 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0233799-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kkmn6f
title: Occurrence Download

description: A dataset containing 211 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dolocerus reichii Mulsant, 1862, Dolocerus reichii Mulsant, 1862, Dolocerus reichii Mulsant, 1862, Dolocerus reichii Mulsant, 1862, Dolocerus reichii Mulsant, 1862, Brachytheciastrum collinum (Schleich. ex Müll.Hal.) Ignatov & Huttunen)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 211 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0233791-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ve6cfz
title: Occurrence Download

description: A dataset containing 14473 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((30.5769 47.87876,31.70066 47.87876,31.70066 48.75506,30.5769 48.75506,30.5769 47.87876))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 14473 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112059-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8bf73c
title: Occurrence Download

description: A dataset containing 10383 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Brachytheciastrum trachypodium (Brid.) Ignatov & Huttunen, Brachytheciastrum velutinum (Hedw.) Ignatov & Huttunen)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 10383 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0233795-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5k8aum
title: Occurrence Download

description: A dataset containing 14473 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((30.5769 47.87876,31.70066 47.87876,31.70066 48.75506,30.5769 48.75506,30.5769 47.87876))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 14473 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112060-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g539nh
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melandrya caraboides (Linnaeus, 1760)",
 "Country is Norway",
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 45 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002988-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n9zzzm
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caladenia subtilis D.L.Jones"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112079-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6qy3mh
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Passiflora podadenia Killip"
 ]
}

 The dataset includes 121 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112075-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6fgywe
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cornufer akarithymus (Brown & Tyler, 1968)"
 ]
}

 The dataset includes 21 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0308523-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xntkcf
title: Occurrence Download

description: A dataset containing 20002 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Country is one of (United States of America, Mexico, Canada)",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Sparisoma rubripinne (Valenciennes, 1840)"
 ]
}

 The dataset includes 20002 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112078-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jc5ssg
title: Occurrence Download

description: A dataset containing 216 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudophilautus microtympanum (Günther, 1858)"
 ]
}

 The dataset includes 216 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0308518-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d4t7hf
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caladenia ×suffusa Hopper & A.P.Br."
 ]
}

 The dataset includes 21 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112083-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yg2m76
title: Occurrence Download

description: A dataset containing 7345 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "GadmGid is COL.13.19_1"
 ]
}

 The dataset includes 7345 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0308511-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.as4fh5
title: Occurrence Download

description: A dataset containing 304 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caladenia ustulata (D.L.Jones) G.N.Backh."
 ]
}

 The dataset includes 304 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112113-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.