cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13750775
title: Comparison of Fixed Single Cell RNA-seq Methods to Enable Transcriptome Profiling of Neutrophils in Clinical Samples - Time course data

description: Monitoring neutrophil gene expression is a powerful tool for understanding disease mechanisms, developing new diagnostics, therapies and optimizing clinical trials. Neutrophils are sensitive to the processing, storage and transportation steps that are involved in clinical sample analysis. This study is the first to evaluate the capabilities of technologies from 10X Genomics, PARSE Biosciences, and HIVE (Honeycomb Biotechnologies) to generate high-quality RNA data from human blood-derived neutrophils. Our comparative analysis shows that all methods produced high quality data, importantly capturing the transcriptomes of neutrophils. 10X FLEX cell populations in particular showed a close concordance with the flow cytometry data. Here, we establish a reliable single-cell RNA sequencing workflow for neutrophils in clinical trials: we offer guidelines on sample collection to preserve RNA quality and demonstrate how each method performs in capturing sensitive cell populations in clinical practice.

This dataset includes only the 10X Flex time course data and analysis.
DOI: 10.15468/dl.uhr8pf
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Semnodactylus wealii (Boulenger, 1882)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.0214 -34.0501,25.5395 -34.1098,25.5395 -32.9007,20.509 -32.9007,20.509 -34.5676,20.524 -34.555,20.8859 -34.5419,20.9606 -34.4398,21.2995 -34.5131,21.5296 -34.4338,21.8696 -34.4439,22.0323 -34.2835,22.221 -34.2428,22.2566 -34.1304,22.5993 -34.0741,22.9652 -34.1674,23.4069 -34.1858,23.4955 -34.0792,23.6056 -34.0563,24.8471 -34.2877,24.9447 -34.2397,25.0214 -34.0501))"
 ]
}

 The dataset includes 48 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036149-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/s1zc-gv89
title: "AN INTERNSHIP REPORT ON BOOK STORE MANAGEMENT SYSTEM PROJECT REPORT"

description: "One advantage of shopping online is being able to quickly seek out deals for items or services provided by many different vendors. Shipping costs (if applicable) reduce the price advantage of online merchandise, though depending on the jurisdiction, a lack of sales tax may compensate for this."
DOI: 10.15468/dl.hyage7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Cymbopogon pospischilii",
 "Geometry POLYGON((29.76451 -26.09643, 32.1599 -26.09643, 32.1599 -22.51877, 29.76451 -22.51877, 29.76451 -26.09643))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036151-250525065834625/datasets/export for details.
DOI: 10.15468/dl.xcx9bw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Cynodon dactylon",
 "Geometry POLYGON((29.76451 -26.09643, 32.1599 -26.09643, 32.1599 -22.51877, 29.76451 -22.51877, 29.76451 -26.09643))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036152-250525065834625/datasets/export for details.
DOI: 10.15468/dl.t8ttkd
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Cyprus difformis",
 "Geometry POLYGON((29.76451 -26.09643, 32.1599 -26.09643, 32.1599 -22.51877, 29.76451 -22.51877, 29.76451 -26.09643))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036153-250525065834625/datasets/export for details.
DOI: 10.15468/dl.6rwdej
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Semnodactylus wealii (Boulenger, 1882)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((32.064 -28.9416,32.4847 -28.5786,30.5701 -28.5786,30.5701 -30.7329,30.6252 -30.6659,31.4179 -29.4257,31.8178 -29.0299,32.064 -28.9416))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036150-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ndeh42
title: Occurrence Download

description: A dataset containing 13260 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.countrycode = 'RW'
 AND occurrence.occurrencestatus = 'PRESENT'
 AND (occurrence."year" &gt;= 2000 AND occurrence."year" &lt;= 2025)
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 13260 records were derived from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036137-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29291471
title: Microbial communities and litter quality co-mediate seagrass litter decomposition under eutrophication

description: Combined addition of macroalgae and nitrogen enhanced decomposition of recalcitrant organic matter in sheath not leaves, whereas it was meditated by litter quality and microbes, according to laboratory experiments spanning 116 days with two types of seagrass litters.
DOI: 10.6084/m9.figshare.29291471.v2
title: Microbial communities and litter quality co-mediate seagrass litter decomposition under eutrophication

description: Combined addition of macroalgae and nitrogen enhanced decomposition of recalcitrant organic matter in sheath not leaves, whereas it was meditated by litter quality and microbes, according to laboratory experiments spanning 116 days with two types of seagrass litters.
DOI: 10.6084/m9.figshare.29291471.v1
title: <b>Seagrass litter decomposition under eutrophication: co-mediation by microbial communities and litter quality</b>

description: Combined addition of macroalgae and nitrogen enhanced decomposition of recalcitrant organic matter in sheath not leaves, whereas it was meditated by litter quality and microbes, according to laboratory experiments spanning 116 days with two types of seagrass litters.
DOI: 10.6084/m9.figshare.29064068
title: Input factors & Output Categories & Guideline Application Framework

description: This file contains detailed descriptions of the input factors and output categories used in the framework from the paper: "A Procedural Framework for Assessing the Desirability of Process Deviations" accepted at the BPM Conference 2025
DOI: 10.6084/m9.figshare.29064068.v1
title: Input factors & Output Categories & Guideline Application Framework

description: This file contains detailed descriptions of the input factors and output categories used in the framework from the paper: "A Procedural Framework for Assessing the Desirability of Process Deviations" accepted at the BPM Conference 2025
DOI: 10.15468/dl.txxebd
title: Occurrence Download

description: A dataset containing 64238299 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Germany",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 64238299 records from 4055 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036122-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r37sds
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Crocidura sibirica Dukelsky, 1930"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012701-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vuv43n
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aechmea amicorum B.R.Silva & H.Luther"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001755-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4jgnfg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Euglenophyceae",
 "HasCoordinate is true",
 "Country is one of (Netherlands)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0220395-210914110416597/datasets/export for details.
DOI: 10.15468/dl.xsmc48
title: Occurrence Download

description: A dataset containing 6114 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bithynia leachii (Sheppard, 1823)"
 ]
}

 The dataset includes 6114 records from 138 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015732-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3sr7tw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fragilariophyceae",
 "HasCoordinate is true",
 "Country is one of (Netherlands)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0220400-210914110416597/datasets/export for details.
DOI: 10.15468/dl.d6dfan
title: Occurrence Download

description: A dataset containing 116 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cephalaria humilis (Thunb.) Roem. & Schult."
 ]
}

 The dataset includes 116 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131513-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7jtkvs
title: Occurrence Download

description: A dataset containing 165 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eustigmatophyceae",
 "HasCoordinate is true",
 "Country is one of (Netherlands)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 165 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0220398-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5c8brw
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-25.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Melinis minutiflora P.Beauv."
 ]
}

 The dataset includes 132 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131499-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pajtuu
title: Occurrence Download

description: A dataset containing 165 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eustigmatophyceae",
 "HasCoordinate is true",
 "Country is one of (Netherlands)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 165 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0220397-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6mw2mk
title: Occurrence Download

description: A dataset containing 4071 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Apteryx owenii Gould, 1847, Neochanna burrowsius (Phillipps, 1926))"
 ]
}

 The dataset includes 4071 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131512-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bqgzyn
title: Occurrence Download

description: A dataset containing 43476 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Populus ×canadensis Moench"
 ]
}

 The dataset includes 43476 records from 528 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131509-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3u3r8n
title: Occurrence Download

description: A dataset containing 149 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chalinolobus tuberculatus (Forster, 1844)"
 ]
}

 The dataset includes 149 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131521-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xhu2th
title: Occurrence Download

description: A dataset containing 14510 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Biodiversidad mastozoológica del Eje Volcánico Transversal"
 ]
}

 The dataset includes 14510 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0277538-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.92n9f9
title: Occurrence Download

description: A dataset containing 13044 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zostera caulescens Miki"
 ]
}

 The dataset includes 13044 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036912-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5jufss
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cephalaria monocephala Sümbül"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131562-230224095556074/datasets/export for details.
DOI: 10.15468/dl.vypyqx
title: Occurrence Download

description: A dataset containing 7096 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-25.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Micropterus salmoides (Lacepède, 1802)"
 ]
}

 The dataset includes 7096 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131519-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4fdc2c
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belgium",
 "TaxonKey is Grus canadensis (Linnaeus, 1758)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036911-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ecag3r
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trimezia guianensis Ravenna"
 ]
}

 The dataset includes 9 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021732-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11114084
title: clinostomum_complanatum_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.11114085
title: clinostomum_complanatum_spades_01.fasta.gz

description: .
DOI: 10.15468/dl.4nmmyx
title: Occurrence Download

description: A dataset containing 605 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zostera tasmanica M.Martens ex Asch."
 ]
}

 The dataset includes 605 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036927-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.62uyh6
title: Occurrence Download

description: A dataset containing 23692 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trinia glauca (L.) Dumort."
 ]
}

 The dataset includes 23692 records from 329 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021764-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.heu8ks
title: Occurrence Download

description: A dataset listing the 3473442 species recorded in GBIF matching the query:
{ }

 The dataset's 3473442 records were derived from 50258 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0422274-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2bsd5c
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Manis pentadactyla"
 ]
}

 The dataset includes 98 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060978-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z7cdyp
title: Occurrence Download

description: A dataset containing 11660999 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brassicaceae"
 ]
}

 The dataset includes 11660999 records from 6785 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060917-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j22rmt
title: Occurrence Download

description: A dataset containing 261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Phenacoccus solenopsis Tinsley, 1898"
 ]
}

 The dataset includes 261 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009382-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tv5kdu
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Allium rosenorum R.M.Fritsch",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061637-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p7eajw
title: Occurrence Download

description: A dataset containing 178 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Calloplesiops altivelis (Steindachner, 1903)"
 ]
}

 The dataset includes 178 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121442-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dq9uyr
title: Occurrence Download

description: A dataset containing 844 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is one of (Netherlands, United Kingdom of Great Britain and Northern Ireland, France, Estonia, Germany, Serbia, Hungary)",
 "TaxonKey is Anasimyia transfuga (Linnaeus, 1758)"
 ]
}

 The dataset includes 844 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006162-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.