cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12018036
title: Impact of asthma severity on long-term asthma control

description: <b>Background:</b> Asthma is a common childhood disease with significant morbidity. Severe asthma accounts for just 4–6% of patients, but this group is more difficult to treat and is responsible for up to 40% of asthma expenses. <b>Objective:</b> The relationship between asthma severity and control is not well characterized. The main objective of this study was to determine impact of asthma severity on asthma control over time. <b>Methods:</b> This was a three year, prospective observational cohort study at a tertiary care children’s hospital. Results were compared over time and between patients with severe and non-severe persistent asthma. Intervention included therapy based on severity and control, accompanied by a NAEPP (EPR-3) guidelines based structured asthma education program. <b>Results:</b> The sample included 471 children referred from primary care offices with the diagnosis of persistent asthma, mean age 6.4 ± 2.4 years. Forty-one children (8.7%) had severe persistent asthma and 430 (91.3%) children had non-severe persistent asthma (mild-moderate persistent). Our sample size decreased over the three-year period and the number of patients completing the third year were 176 (38%) and among them 20 (11.4%) had severe asthma. At the initial visit, children with severe persistent asthma had significantly more acute care needs, more daily symptoms, and lower mean Asthma Control Test™ scores compared to children with non-severe persistent asthma. Differences between groups decreased within six months with significant improvements in most indicators persisting throughout three-year follow up in both groups (<i>p</i> <b>Conclusion:</b> Asthma control improves independent of severity if asthma guidelines are followed.
DOI: 10.5281/zenodo.4745984
title: raster_runif: a raster with random values between 0 and 1 for every cell of the datasource GRTSmaster_habitats

description: The <code>raster_runif</code> data source covers the Flanders and Brussels region and has a resolution of 32 meters. The raster cells with non-missing values match the value-cells of the <code>GRTSmaster_habitats</code> data source with a small buffer added. Every raster cell has a random value between 0 and 1 according to the uniform distribution. An example usage of this raster is its combination with the <code>GRTSmaster_habitats</code> and <code>habitatmap_stdized</code> data sources in order to draw an equal probability sample of habitat types in Flanders. <code>Habitatmap_stdized </code>contains polygons that are partially or fully covered by habitat types. The proportion of a certain type within a polygon is provided by the <code>phab</code> value. We can draw an equal probability sample size <em>n</em> for a certain habitat type as follows: select all raster cells of <code>GRTSmaster_habitats</code> that overlap with the sampling frame of the target habitat type keep the raster cells for which the <code>raster_runif</code> value is lower than the <code>phab</code> value of the habitat type within the polygon finally select the <em>n</em> raster cells with the lowest GRTS ranking number. The R-code for creating the <code>raster_runif</code> data source can be found in the GitHub repository 'n2khab-preprocessing' at commit ede43a4. A reading function to return the data source in a standardized way into the R environment is provided by the R-package n2khab.
DOI: 10.5281/zenodo.4745983
title: raster_runif: a raster with random values between 0 and 1 for every cell of the datasource GRTSmaster_habitats

description: The <code>raster_runif</code> data source covers the Flanders and Brussels region and has a resolution of 32 meters. The raster cells with non-missing values match the value-cells of the <code>GRTSmaster_habitats</code> data source with a small buffer added. Every raster cell has a random value between 0 and 1 according to the uniform distribution. An example usage of this raster is its combination with the <code>GRTSmaster_habitats</code> and <code>habitatmap_stdized</code> data sources in order to draw an equal probability sample of habitat types in Flanders. <code>Habitatmap_stdized </code>contains polygons that are partially or fully covered by habitat types. The proportion of a certain type within a polygon is provided by the <code>phab</code> value. We can draw an equal probability sample size <em>n</em> for a certain habitat type as follows: select all raster cells of <code>GRTSmaster_habitats</code> that overlap with the sampling frame of the target habitat type keep the raster cells for which the <code>raster_runif</code> value is lower than the <code>phab</code> value of the habitat type within the polygon finally select the <em>n</em> raster cells with the lowest GRTS ranking number. The R-code for creating the <code>raster_runif</code> data source can be found in the GitHub repository 'n2khab-preprocessing' at commit ede43a4. A reading function to return the data source in a standardized way into the R environment is provided by the R-package n2khab.
DOI: 10.6084/m9.figshare.14646747
title: Release of VOCs

description: Table displaying the counts of detected compounds from headspace samples taken from diapausing <i>H. halys</i> after exposure to consepcific compounds.
DOI: 10.6084/m9.figshare.14646702
title: agitation of groups for olfactory detection

description: Recordings of positive and negative olfactory detection of<i> H. halys</i> odor after agitating varying sized groups.
DOI: 10.6084/m9.figshare.14646702.v1
title: agitation of groups for olfactory detection

description: Recordings of positive and negative olfactory detection of<i> H. halys</i> odor after agitating varying sized groups.
DOI: 10.34740/kaggle/dsv/2259347
title: 2021 World Population (updated daily)
DOI: 10.34740/kaggle/dsv/2259353
title: COVID Vaccination in World (updated daily)
DOI: 10.6084/m9.figshare.14646624.v1
title: Ethovision data for horizontal mobility

description: Dispersal measurements taken from EthoVision/Noldus for horizontal dispersal of <i>H. halys</i> after exposure to conspecific volatiles
DOI: 10.6084/m9.figshare.14646624
title: Ethovision data for horizontal mobility

description: Dispersal measurements taken from EthoVision/Noldus for horizontal dispersal of <i>H. halys</i> after exposure to conspecific volatiles
DOI: 10.7267/k3569b941
title: Benthic macroinvertebrates sampled above and below Cougar Dam
title: Data for manuscript "Unintended consequences of selective water withdrawals from reservoirs alter downstream macroinvertebrate communities"

description: This dataset accompanies the manuscript Unintended consequences of selective water withdrawals from reservoirs alter downstream macroinvertebrate communities in Water Resources Research.

Benthic macroinvertebrates were collected from samples taken annually during the first two weeks of August from 2002-2007 and again in 2017 at six sites in the South Fork McKenzie River.  Taxonomy of samples collected prior to 2017 have been updated to be consistent with 2017 taxa designations.
DOI: 10.6084/m9.figshare.14646657.v1
title: dataset1.xlsx

description: This dataset refers to the final results of the PCR analysis.<br>
DOI: 10.5517/ccdc.csd.cc26y5mz
title: CCDC 2053831: Experimental Crystal Structure Determination

description: Related Article: Jordan De Jesus Silva, Margherita Pucino, Feng Zhai, Deni Mance, Zachariah J. Berkson, Darryl F. Nater, Amir H. Hoveyda, Christophe Copéret, Richard R. Schrock|2021|Inorg.Chem.|60|6875|doi:10.1021/acs.inorgchem.0c03173
DOI: 10.5517/ccdc.csd.cc27dqs5
title: CCDC 2067817: Experimental Crystal Structure Determination

description: Related Article: Alberto Llobat, Jorge Escorihuela, Santos Fustero, Mercedes Medio-Simón|2021|Org.Lett.|23|3691|doi:10.1021/acs.orglett.1c01076
DOI: 10.5517/ccdc.csd.cc27dqyb
title: CCDC 2067822: Experimental Crystal Structure Determination

description: Related Article: Alberto Llobat, Jorge Escorihuela, Santos Fustero, Mercedes Medio-Simón|2021|Org.Lett.|23|3691|doi:10.1021/acs.orglett.1c01076
DOI: 10.6084/m9.figshare.14646657.v2
title: dataset1.xlsx

description: This dataset refers to the final results of the PCR analysis.<br>
DOI: 10.6084/m9.figshare.14582760
title: Budding Epithelial Morphogenesis Driven by Cell-Matrix vs. Cell-Cell Adhesion

description: This dataset includes all raw data of Wang et al., 2021, Budding Epithelial Morphogenesis Driven by Cell-Matrix vs. Cell-Cell Adhesion, except for the scRNA-seq data that is available on GEO (GSE159780). Data organization follows the figures and videos of the paper (see data-layout.png). Paper abstract: Many embryonic organs undergo epithelial morphogenesis to form tree-like hierarchical structures. However, it remains unclear what drives the budding and branching of stratified epithelia, such as in embryonic salivary gland and pancreas. Here, we performed live-organ imaging of mouse embryonic salivary glands at single-cell resolution to reveal that budding morphogenesis is driven by expansion and folding of a distinct epithelial surface cell sheet characterized by strong cell-matrix adhesions and weak cell-cell adhesions. Profiling of single-cell transcriptomes of this epithelium revealed spatial patterns of transcription underlying these cell adhesion differences. We then synthetically reconstituted budding morphogenesis by experimentally suppressing E-cadherin expression and inducing basement membrane formation in 3D spheroid cultures of engineered cells, which required β1 integrin-mediated cell-matrix adhesion for successful budding. Thus, stratified epithelial budding, the key first step of branching morphogenesis, is driven by an overall combination of strong cell-matrix adhesion and weak cell-cell adhesion by peripheral epithelial cells.
DOI: 10.6084/m9.figshare.14128535.v1
title: Meehan_et_al._2021_Submission_Pedobiologia

description: Matthew L Meehan third data chapter from thesis.<br>Metadata for csv files is in the excel sheet.
DOI: 10.6084/m9.figshare.14128535
title: Meehan_et_al._2021_Submission_Pedobiologia

description: Matthew L Meehan third data chapter from thesis.<br>Metadata for csv files is in the excel sheet.
DOI: 10.6084/m9.figshare.14601726
title: Participation in early childhood development programs promoted by civil societies in Mexico: a behavioral economics analysis

description: Important Notice: Under request of PLos one and in order to contribute to transparency and replicability of research, the authors of the study entitled “A behavioral economics analysis of the participation in early childhood development social programs promoted by civil societies in Mexico”, made the qualitative data available (Interview guides applied and focus groups). Any other use than exploring or replicating the results of the above-mentioned paper is not authorized and shall not be used without previous authorization of the investigators. If you are interested in analyzing this database for original research purposes please contact Edson Serván Mori (eservan@insp.mx).
DOI: 10.5281/zenodo.4781184
title: SKI10 papers

description: This is a collection of papers related to the workshop and challenge SKI10, with Tobias Heimann as the main organizer. The challenge was closed in 2018 and is archived at https://ski10.grand-challenge.org/ Some of these papers are contained in the book https://www.amazon.com/Medical-Image-Analysis-Clinic-Challenge/dp/1453759395/
DOI: 10.6084/m9.figshare.14647464
title: Untitled Item Aberrations of the Extremely Dangerous New Project of Statute for Tunisian University Teachers and Researchers by the Ministry of Higher Education.

description: Aberrations of the Extremely Dangerous New Project of Statute for Tunisian University Teachers and Researchers by the Ministry of Higher Education.
DOI: 10.6084/m9.figshare.14647464.v1
title: Untitled Item Aberrations of the Extremely Dangerous New Project of Statute for Tunisian University Teachers and Researchers by the Ministry of Higher Education.

description: Aberrations of the Extremely Dangerous New Project of Statute for Tunisian University Teachers and Researchers by the Ministry of Higher Education.
DOI: 10.6084/m9.figshare.14647506
title: Human health risk assessment from metals in milk from the cows grazing in an industrial area: a mass balance approach

description: This is the supplementary material for the research article titled "Human health risk assessment from metals in milk from the cows grazing in an industrial area: a mass balance approach"
DOI: 10.6084/m9.figshare.14647506.v1
title: Human health risk assessment from metals in milk from the cows grazing in an industrial area: a mass balance approach

description: This is the supplementary material for the research article titled "Human health risk assessment from metals in milk from the cows grazing in an industrial area: a mass balance approach"
DOI: 10.5281/zenodo.4781231
title: SKI10 papers

description: This is a collection of papers related to the workshop and challenge SKI10, with Tobias Heimann as the main organizer. The challenge was closed in 2018 and is archived at https://ski10.grand-challenge.org/ Some of these papers are contained in the book https://www.amazon.com/Medical-Image-Analysis-Clinic-Challenge/dp/1453759395/
DOI: 10.5281/zenodo.4781183
title: SKI10 papers

description: This is a collection of papers related to the workshop and challenge SKI10, with Tobias Heimann as the main organizer. The challenge was closed in 2018 and is archived at https://ski10.grand-challenge.org/ Some of these papers are contained in the book https://www.amazon.com/Medical-Image-Analysis-Clinic-Challenge/dp/1453759395/
DOI: 10.5281/zenodo.3263830
title: Raw data for "Benchmarking the in vitro toxicity and chemical composition of plastic consumer products"

description: These files are associated with the publication "Benchmarking the in vitro toxicity and chemical composition of plastic consumer products" published in Environmental Science & Technology at https://doi.org/10.1021/acs.est.9b02293. Raw data files for the non-target chemical analysis performed on consumer plastics using GC-QTOF-MS (Agilent .D format). FTIR spectra of the plastic products (pdf format).
DOI: 10.5281/zenodo.3263829
title: Raw data for "Benchmarking the in vitro toxicity and chemical composition of plastic consumer products"

description: These files are associated with the publication "Benchmarking the in vitro toxicity and chemical composition of plastic consumer products" published in Environmental Science & Technology at https://doi.org/10.1021/acs.est.9b02293. Raw data files for the non-target chemical analysis performed on consumer plastics using GC-QTOF-MS (Agilent .D format). FTIR spectra of the plastic products (pdf format).
DOI: 10.5281/zenodo.4004763
title: Raw data for "Are bioplastics and plant-based materials safer than conventional plastics? In vitro toxicity and chemical composition"

description: This upload contains the raw data files from FTIR analysis (csv format) and the non-target chemical analysis (UPLC-QTOF-MS/MS, positive ionization, MS<sup>E</sup> acquisition, Waters raw format) associated with our publication "Are bioplastics and plant-based materials safer than conventional plastics? In vitro toxicity and chemical composition" published in Environment International (https://doi.org/10.1016/j.envint.2020.106066). You will find all methodological details there.
DOI: 10.5281/zenodo.4004762
title: Raw data for "Are bioplastics and plant-based materials safer than conventional plastics? In vitro toxicity and chemical composition"

description: This upload contains the raw data files from FTIR analysis (csv format) and the non-target chemical analysis (UPLC-QTOF-MS/MS, positive ionization, MS<sup>E</sup> acquisition, Waters raw format) associated with our publication "Are bioplastics and plant-based materials safer than conventional plastics? In vitro toxicity and chemical composition" published in Environment International (https://doi.org/10.1016/j.envint.2020.106066). You will find all methodological details there.
DOI: 10.34740/kaggle/dsv/2259691
title: Herbarium 2021 RBS
DOI: 10.5281/zenodo.4781285
title: PISCES-BYONIC example output

description: Annual mean outputs from the PISCES-BYONIC configuration: https://github.com/atagliab/BYONIC-PISCES
DOI: 10.6084/m9.figshare.14560782
title: Normal cells repel WWOX-negative or -dysfunctional cancer cells via WWOX cell surface epitope 286-299

description: Supplementary spreadsheet for main figures and supplementary figures, and supplementary videos,
DOI: 10.6084/m9.figshare.14560782.v5
title: Cell surface epitope WWOX286-299 in normal cells is responsible for repelling invading WWOX-negative or -dysfunctional cancer cells

description: Supplementary spreadsheet for main figures and supplementary figures, and supplementary videos,
DOI: 10.34740/kaggle/dsv/2259853
title: Herbarium 2021 RBS
DOI: 10.5281/zenodo.4781067
title: ATCC Even Mock Community full length 16S rRNA gene reference sequences in DADA2 format

description: After an informative Twitter conversation about 16S sequencing bias and the importance of mock communities. I decided to share some of the files I had that might also help others do good microbiome analysis. The files contain multiple 16S rRNA sequences belonging to the 20 species reported in the ATCC even mock community and other fasta. The ones you need for mock analysis are only the following two fasta files formatted for use in dada2 assignTaxonomy command (ATCC_Even_Mock_community_GTDBr202.fa & ATCC_Even_Mock_community_RefSeq.fa). to create them I used the most recent RefSeq +RDP database on my other zenodo page (included here too) and the entire GTDB ssu collection after formatting the fasta headers ( uploaded it here too). I have also included information I have found about the ATCC mock species and created a key to find the GTDB taxonomy. The use case as I see it is that you can query these databases with your samples if you are using the ATCC mock community as a positive/bias control in your microbiome experiment. You can probably also use it with this awesome work by Sudarshan Shetty here https://microsud.github.io/chkMocks/articles/cExampleCustomMocks.html . You can also do as you please with it :-). If you need me to assist or anything microbiome my email is <strong>alishum.ali@postgrad.curtin.edu.au</strong> Everything I used is uploaded, happy days. The primitive bash code is to help you scientists reproduce the fasta files.
DOI: 10.5281/zenodo.4781066
title: ATCC Even Mock Community full length 16S rRNA gene reference sequences in DADA2 format

description: After an informative Twitter conversation about 16S sequencing bias and the importance of mock communities. I decided to share some of the files I had that might also help others do good microbiome analysis. The files contain multiple 16S rRNA sequences belonging to the 20 species reported in the ATCC even mock community and other fasta. The ones you need for mock analysis are only the following two fasta files formatted for use in dada2 assignTaxonomy command (ATCC_Even_Mock_community_GTDBr202.fa & ATCC_Even_Mock_community_RefSeq.fa). to create them I used the most recent RefSeq +RDP database on my other zenodo page (included here too) and the entire GTDB ssu collection after formatting the fasta headers ( uploaded it here too). I have also included information I have found about the ATCC mock species and created a key to find the GTDB taxonomy. The use case as I see it is that you can query these databases with your samples if you are using the ATCC mock community as a positive/bias control in your microbiome experiment. You can probably also use it with this awesome work by Sudarshan Shetty here https://microsud.github.io/chkMocks/articles/cExampleCustomMocks.html . You can also do as you please with it :-). If you need me to assist or anything microbiome my email is <strong>alishum.ali@postgrad.curtin.edu.au</strong> Everything I used is uploaded, happy days. The primitive bash code is to help you scientists reproduce the fasta files.
DOI: 10.5281/zenodo.4781344
title: Shapefiles of Admin 1, Admin 2, and National Parks for Bioko Island, Equatorial Guinea

description: Three ESRI Shapefiles of Bioko Island, Equatorial Guinea in 2018. One for Admin 1 regions, one for Admin 2 regions, and one for National Parks. This data was collected by the Bioko Island Malaria Elimination Program (BIMEP) and is posted with their permission.
DOI: 10.5281/zenodo.4781343
title: Shapefiles of Admin 1, Admin 2, and National Parks for Bioko Island, Equatorial Guinea

description: Three ESRI Shapefiles of Bioko Island, Equatorial Guinea in 2018. One for Admin 1 regions, one for Admin 2 regions, and one for National Parks. This data was collected by the Bioko Island Malaria Elimination Program (BIMEP) and is posted with their permission.
DOI: 10.6084/m9.figshare.12852738
title: Me, myself and the other. Interreligious and intrareligious relations in neo-conservative online forums

description: The Internet can be a place for exchange, but also foster echo chambers of closed world views. This poses interesting questions for the possibility of interreligious dialogue online. The article examines the cases of German Evangelical and Salafist Internet forums which mainly target a specific religious denomination, but nevertheless provide spaces for contact between different religions and denominations. For the study, a combination of quantitative and qualitative text analysis is applied. Quantitative analysis makes it possible to gain an overview of the discussed themes from a large body of text and serves as a basis for sampling smaller textual units for close examination using qualitative content analysis. The analysis yields two primary results: First, intrareligious dialogue plays a particular role for the negotiation of religious identity. Second, interreligious relations reflect the societal positions of both religious groups.
DOI: 10.34740/kaggle/dsv/2260015
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.6084/m9.figshare.14648904
title: Table S1 - Supplemental material.docx

description: Likert scale frequencies concerning student responses to the questionnaire regarding the use of PBL.
DOI: 10.6084/m9.figshare.14648904.v1
title: Table S1 - Supplemental material.docx

description: Likert scale frequencies concerning student responses to the questionnaire regarding the use of PBL.
DOI: 10.6084/m9.figshare.14649258
title: VPU influenza pseudotype library catalog May 2021

description: List of influenza pseudotypes in the VPU catalog as of May 2021. This list should be used in consultation with the manuscript linked below.
DOI: 10.6084/m9.figshare.14649258.v1
title: VPU influenza pseudotype library catalog May 2021

description: List of influenza pseudotypes in the VPU catalog as of May 2021. This list should be used in consultation with the manuscript linked below.
DOI: 10.6084/m9.figshare.13729099
title: The person in the voice

description: In this audio essay, the author/speaker contemplates the perceived relationship between the voice and the speaker—the person in the voice—and asks the following questions: What does it mean when we judge that the person does not sound like they should? In terms of pedagogy and beyond, what does it mean when we judge a person as not speaking the way we think they should? How does our judgment affect and effect the speaker?
DOI: 10.6084/m9.figshare.13729099.v1
title: The person in the voice

description: In this audio essay, the author/speaker contemplates the perceived relationship between the voice and the speaker—the person in the voice—and asks the following questions: What does it mean when we judge that the person does not sound like they should? In terms of pedagogy and beyond, what does it mean when we judge a person as not speaking the way we think they should? How does our judgment affect and effect the speaker?
DOI: 10.6084/m9.figshare.14649921
title: Characteristics of the complete chloroplast genome sequence of Stylidium debile and Stylidium petiolare (Stylidiaceae)

description: Two complete plastome sequences of <i>Stylidium debile</i> and <i>Stylidium petiolare.</i>