cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/6zwcgrttkp
title: Data from: Over eight hundred cannabis strains characterized by the relationship between their subjective effects, perceptual profiles, and chemical compositions

description: Commercial cannabis strains have multiplied in recent years as a consequence of regional changes in legislation for medicinal and recreational use. The lack of a standardized system to label plants and seeds hinders the consistent identification of particular strains with their elicited psychoactive effects. We analyzed a large publicly available dataset where users freely reported their experience with different strains, including subjective effects and flavour associations. Metrics of strain similarity based on self- reported effects and flavour tags allowed machine learning classification into three major clusters associated with species (Cannabis sativa, Cannabis indica, and hybrids). Synergy between terpene and cannabinoid content was suggested by significative correlations between psychoactive effects and flavour tags. The use of predefined tags was validated by the application of Latent Semantic Analysis (LSA) to unstructured written reviews, also providing breed-specific topics consistent with their purported medicinal and subjective effects. While cannabinoid content was variable even within individual strains, terpene profiles matched the perceptual characterizations made by the users and could be used to predict psychoactive effects. Our work represents the first data-driven synthesis of self-reported and chemical information on a large number of cannabis strains. Since terpene content is robustly inherited and less influenced by environmental factors, flavour perception could represent a reliable marker for the prediction of psychoactive effects of cannabis. Our novel methodology contributes towards the demands for reliable strain classification and characterization in the context of an ever-growing market for medicinal and recreational cannabis.
DOI: 10.6084/m9.figshare.21829257.v1
title: Emotional expressiveness and avoidance in narratives of unaccompanied refugee minors

description: The aim of this study was to examine a cohort of unaccompanied refugee minors (URMs) by means of psycholinguistic methods in order to obtain a more subtle picture of their degree of traumatization. Twenty-eight participants were included in the Stress-Inducing Speech Task (SIST) consisting of a free association (FA) and a stress (STR) condition. Narratives were examined by means of (1) quantitative parameters (word count); (2) psycholinguistic variables (temporal junctures, TJs), narrative structure, referential activity (RA)—a measure of emotional expressivity; and (3) content analysis ratings. Word count was significantly lower than in age-matched norms. In the FA condition, TJs were lower, but in the STR condition, rates were comparable. RA was significantly higher in both conditions. Content analysis ratings showed that the experiences described by these youths were potentially traumatic in nature. This pattern of narrative shows a mixture of fulfilling the task demand, while containing an emotionally charged narrative. Narrative structure was absent in the FA condition, but preserved in the STR condition, as URMs struggled with the description of non-normative events. This indicates that these youths have not yet emotionally dealt with and fully integrated their trauma experiences.
DOI: 10.6084/m9.figshare.3526376.v1
title: Appendix B. A three-dimensional representation of the K-means cluster anlysis based on the mean position of the species along the three RLQ axes.

description: A three-dimensional representation of the K-means cluster anlysis based on the mean position of the species along the three RLQ axes.
DOI: 10.6084/m9.figshare.3823563.v1
title: Inactivation of lipase and lipoxygenase of wheat germ with temperature-controlled short wave infrared radiation and its effect on storage stability and quality of wheat germ oil

description: <b>Table 1. </b>The Aw and WC of the WG samples before and after SIR radiation. (Note: x-axis values reflect SIR condition, the number before the hyphen is surface temperature: 70-90°C, the number before the hyphen is radiation time: 10-60 min).<b>Table 2. </b>The LA and LOX activity of the WG samples before and after SIR radiation. <b>Table 3. </b>The FFA content of WG samples during storage.<b>Table 4. </b>The PV of WG samples during storage.<b>Table 5. </b>The CD content of WG samples during storage.<b>Table 6. </b>The pAV of WG samples during storage.<b>Table 7. </b>The tocopherols content of the WG samples.<br><br><br><br>
DOI: 10.6084/m9.figshare.4798042.v3
title: VEnron2

description: VEnron2 is an industrial-scale and public spreadsheet corpus with version information, including 1,609 evolution groups and 12,254 spreadsheets. (Multiple versions originated from the same spreadsheet are considered as an evolution group.)<br>VEnron2 is a big improvement to VEnron1.1. We extrace much more evolution groups and spreadsheets from the Enron email archive, by using SpreadCluster.VErnon2 is published associated with our MSR 2017 paper in May 2017.<br>Liang Xu, Wensheng Dou, Chushu Gao, Jie Wang, Jun Wei, Hua Zhong, Tao Huang. SpreadCluster: Recovering Versioned Spreadsheets through Similarity-Based Clustering. In <i>Proceedings of the 14th International Conference on Mining Software Repositories</i> (<b><i>MSR 2017</i></b>), May 2017.
DOI: 10.6084/m9.figshare.12235406.v1
title: VG_samples

description: Pitfalls and Opportunities in Benchmarking Metagenomic Classifiers
DOI: 10.6084/m9.figshare.26030569.v1
title: <b>Refining pain management in mice by comparing multimodal analgesia and NSAID monotherapy for neurosurgical procedures</b>

description: While neurosurgical interventions are frequently used in laboratory mice, refinement efforts to optimize analgesic management based on multimodal approaches appear to be rather limited.Therefore, we compared the efficacy and tolerability of combinations of the non-steroidal anti-inflammatory drug carprofen, a sustained-release formulation of the opioid buprenorphine, and the local anesthetic bupivacaine with carprofen monotherapy. Female and male C57BL/6J mice were subjected to isoflurane anesthesia and an intracranial electrode implant procedure. Given the multidimensional nature of postsurgical pain and distress, various physiological, behavioral, and biochemical parameters were applied for their assessment. The analysis revealed alterations in Neuro scores, home cage locomotion, body weight, nest building, mouse grimace scales, and fecal corticosterone metabolites. A composite measure scheme allowed the allocation of individual mice to severity classes. The comparison between groups failed to indicate the superiority of multimodal regimens over high-dose NSAID monotherapy.In conclusion, our findings confirmed the informative value of various parameters for assessment of pain and distress following neurosurgical procedures in mice. While all drug regimens were well tolerated in control mice, our data suggest that the total drug load should be carefully considered for perioperative management. Future studies would be of interest to assess potential synergies of drug combinations with lower doses of carprofen.<b>Raw data sets:</b>The provided file contains the datasets used to generate the figures in this publication. Each Excel sheet is named according to the corresponding figure. For further information on experimental groups, measured parameters and abbreviations please see the 'info' sheet of the Excel file. <br>
DOI: 10.6084/m9.figshare.27198798.v1
title: SummaryZScores_Parks.csv

description: Summary of the mean projected change (<i> Delta </i>prefix) and the uncertainty (<i>Unc</i> prefix) in that change across climate models for each NPS unit. We computed these for five climate variables: mean annual temperature (<i>Temp </i>suffix), mean annual precipitation (<i>Precip </i>suffix), frequency of extreme precipitation events (<i>PX </i>suffix), growing season length (<i>GL </i>suffix), and climatic water deficit (<i>CWD </i>suffix). NPS units are represented by their 4-Letter Park Code. <i>NA</i> represents missing data. All values are rounded to the first decimal place. All else equal, parks with higher historical variability will have lower z-scores values, resulting in lower values for the mean projected change and uncertainty.
DOI: 10.6084/m9.figshare.28660109.v2
title: Dataset for "The effects of sunlight exposure on mortality: a systematic review of epidemiological studies"

description: Data used in Parkhouse et al. The effects of sunlight exposure on mortality: a systematic review of epidemiological studies.
DOI: 10.6084/m9.figshare.29077214.v1
title: BTCV dataset

description: LKDA-Net: 基于大核深度可分离卷积注意力的高效3D医学图像分割模型<br> <br><br>LKDA-Net 是一种轻量化的3D医学图像分割网络，通过 大核深度可分离卷积注意力（LKD Attention） 和 跳跃连接融合模块，在降低计算复杂度的同时实现高精度分割。本仓库提供完整的训练、推理及可视化代码。<br><br>We propose <b>a</b> lightweight three-dimensional convolutional network, LKDA-Net, <b>for</b> efficient <b>and</b> accurate three-dimensional volumetric segmentation. This network adopts <b>a</b> large-kernel depthwise convolution attention mechanism to simulate <b>the</b> self-attention mechanism <b>of</b> Transformers. Firstly, inspired <b>by</b> <b>the</b> Swin Transformer module, we investigate different-sized large-kernel convolution attention mechanisms to obtain larger global receptive fields, <b>and</b> replace <b>the</b> MLP <b>in</b> <b>the</b> Swin Transformer <b>with</b> <b>the</b> Inverted Bottleneck <b>with</b> Depthwise Convolutional Augmentation to reduce channel redundancy <b>and</b> enhance feature expression <b>and</b> segmentation performance. Secondly, we propose <b>a</b> skip connection fusion module to achieve smooth feature fusion, enabling <b>the</b> decoder to effectively utilize <b>the</b> features <b>of</b> <b>the</b> encoder. Finally, through experimental evaluations <b>on</b> <b>three</b> <b>public</b> <b>datasets</b>, <b>namely</b> <b>Synapse</b>, <b>BTCV</b> <b>and</b> <b>ACDC</b>, <b>LKDA-Net</b> <b>outperforms</b> <b>existing</b> <b>models</b> <b>of</b> <b>various</b> <b>architectures</b> <b>in</b> <b>segmentation</b> <b>performance</b> <b>and</b> <b>has</b> <b>fewer</b> <b>parameters</b>.
DOI: 10.17608/k6.auckland.21341421.v1
title: King penguin Spectramax transmission.xlsx

description: These are the raw data obtained using a SpectraMax 13x (Molecular Devices Inc, San Jose, CA) to determine the amount of light at each given wavelength transmitted through various ocular structures (cornea, lens, vitreous and nictitating membrane) and through the whole eye of the king penguin <em>Aptenodytes patagonicus</em>. There is both the raw transmission data (and, for K4, absorbance data, from which transmission is calculated) and the amount transmitted compared with the amount transmitted at 700 nm, expressed as a decimel where the transmission at 700 nm is 1.
DOI: 10.17632/4mjvd88kvs
title: Supplementary Materials_CGRPi & AA

description: Supplementary Materials_CGRPi & AA
DOI: 10.17632/c6727gf73g
title: LINF_180017000

description: RING-type E3 ligase 2; Leishmania infantum (strain JPCM5)
DOI: 10.17632/s5j25b5tjk
title: Bengali Vocal Spectrum (BVS): A Bengali Voice Dataset for Psychological Stability Analysis

description: The Bengali Vocal Spectrum (BVS) dataset is a valuable resource for psychological stability analysis, featuring 85 audio recordings in the Bengali language, totaling approximately 4.65 hours. The dataset is divided into two groups: 43 recordings (2.63 hours) from psychologically unstable patients and 42 recordings (2.02 hours) from psychologically stable individuals. These recordings were collected at Pabna Mental Hospital, Pabna, and National Institute of Mental Health & Hospital, Dhaka. The dataset was compiled with a firm commitment to ethical standards, including obtaining all necessary permissions and ensuring the confidentiality and anonymity of all participants. The data was meticulously preprocessed using Audacity software to normalize the volume, remove background noise, and ensure clarity, with each file saved in .wav format at a 48000 Hz sample rate. Spectrogram images are in a separate folder and segmented into 2-second clips from the audio data for signal processing techniques, enhancing the utility of the dataset for machine learning applications. Researchers can utilize this dataset to develop or refine algorithms that assess psychological stability based on vocal characteristics. The data's format and quality also make it suitable for advanced signal processing tasks, which could lead to new insights into the acoustic markers associated with psychological conditions.
DOI: 10.6084/m9.figshare.28636433.v1
title: Brain-inspired algorithm “cocktail party” listening data for individuals with hearing loss

description: Raw data supporting the manuscript "A brain-inspired algorithm improves “cocktail party” listening for individuals with hearing loss"
DOI: 10.17632/k4jyc5r4yf
title: Oxygen and aluminum-magnesium isotope systematics of the metasomatically altered coarse-grained igneous calcium-aluminum-rich from CK3.73.8 carbonaceous chondrites

description: Backscattered electron images and X-ray elemental maps of CK3 CAIs 
Oxygen isotopic data of indicavidual minerals in CK3 CAIs
Al-Mg isotope systematics of CK3 CAIs
DOI: 10.17632/wn5k3nynwd
title: Simulations of Spherical Cells on 3D Scaffolds

description: This MATLAB simulation models the movement of spherical "cells" constrained to travel along a 3D scaffold represented by an STL mesh. It mimics how particles behave when moving in constrained environments such as porous scaffolds, common in biomedical or soft matter applications. The code calculates mean squared displacement, first time passage, shortest traversal distance and path length. Any .STL file may be uploaded as the scaffold environment, and there are options for producing images and videos of the simulations. This code is fully parallelised.

Each cell:
• Begins its motion by either falling under gravity or being initialized on the scaffold.
• Moves randomly with a user-defined maximum velocity.
• Snaps to the nearest point on the scaffold at every time step.
• Avoids overlapping with other cells based on a "squish" tolerance.
• Logs its trajectory and outputs metrics like motility and first passage time.
The simulation is repeated for a set number of runs, and each run exports trajectory plots, Excel files with data, and optionally images and videos of movement over time.
DOI: 10.17632/zwxxscny6x
title: Impaired emotion perception and categorization in semantic aphasia

description: This data was collected for the manuscript 'Impaired emotion perception and categorization in semantic aphasia'. We studied a sample of left hemisphere stroke patients with 'semantic aphasia', characterised as multimodal impairment in the controlled retrieval of semantic concepts. We tested the constructionist hypothesis of emotion; that emotion perception and categorization is dependent on conceptual representations of discrete emotion states. Based on this hypothesis, impaired semantic processing may also manifest as impaired emotion processing. We assessed the effects of impaired semantic control on the ability to categorize discrete facial emotion portrayals, across two studies. We found evidence for baseline impairments in emotion categorization across two studies. We also found anticipated cueing effects, where facilitating access to relevant conceptual information aided emotion categorization, while distracting miscues had deleterious effects on accuracy. All collected and processed data is uploaded here. The document 'Impaired emotion perception and categorization in semantic aphasia – Data Guide' can be used a guide for interpreting the data with reference to the manuscript.
DOI: 10.6084/m9.figshare.19383353.v1
title: Cortical effects of wrist tendon vibration during an arm tracking task in chronic stroke survivors: An EEG study

description: Description: Refer to the README.txt in the Data.zip or to the README.txt in the Code.zip
DOI: 10.6084/m9.figshare.20406309.v2
title: Downscaled_GWSA_dataset

description: This file contains the model program and input data files, and downscaled groundwater storage anomalies(GWSA) dataset.“Downscaled_GWSA_datasets” datasets didn't include the gap data of GRACE and GRACE-FO.“Downscaled_GWSA_datasets_Gap_filled” datasets had filled the gap data of GRACE and GRACE-FO.
DOI: 10.6084/m9.figshare.5067364.v2
title: Ethical Issues in the Relationship between Medical Students and the Pharmaceutical Industry. A Comparative Study of the Situation in Poland and in the US.

description: SPSS file with the data from 2013.
DOI: 10.17632/29kyrfy2dr
title: Supplementary materials for the manuscript Phenotypic Characteristics and Variability in CHARGE Syndrome: A PRISMA-Compliant Systematic Review and Meta-Analysis

description: Supplementary Material 1 to accompany the manuscript Phenotypic Characteristics and Variability in CHARGE Syndrome: A PRISMA-Compliant Systematic Review and Meta-Analysis. Supplementary material 1 includes Appendix 1 - PRISMA (2020) checklist, Appendix 2 - Detailed search strategy, Appendix 3 - Reference list of studies identified through manual searches, Appendix 4 - Inclusion and exclusion criteria used for study selection, Appendix 5 - Quality appraisal, Appendix 6. Sensitivity assessments, Appendix 7 - Forest plots and sensitivity analysis for diagnostic signs, Appendix 8 - Incidence of physical characteristics and conditions associated with CHARGE syndrome reported in eligible studies, Appendix 9 -  Forest plots and sensitivity analysis for physical characteristics and conditions, Appendix 10 - Details of Quality Weighted Pooled Prevalence Estimates and Subgroup and Sensitivity Analysis for Cognitive, Behavioural, Psychological and Sleep Characteristics, Appendix 11 - Operational Definitions for Behavioural, Psychological, Cognitive and Sleep Characteristics in CHARGE Syndrome, Appendix 12 - Meta-Regression Estimates of The Effects of Co-Occurring Characteristics on Behavioural, Psychological, Cognitive and Sleep Characteristics in CHARGE Syndrome. Statistical Significance Evaluated Using Benjamini-Hochberg Adjustment for Multiple Comparisons, Appendix 13 - Meta-Regression Estimates of Genotype-Phenotype Correlations in CHARGE Syndrome. Statistical Significance Evaluated Using Benjamini-Hochberg Adjustment for Multiple Comparisons and Appendix 14 - Meta-Regression Estimates for Each Characteristic Identified to be Associated with CHARGE syndrome using Year of Publication as the Moderator Variable. Statistical Significance Evaluated Using Benjamini-Hochberg Adjustment for Multiple Comparisons

Supplementary Material 2 to accompany the manuscript Phenotypic Characteristics and Variability in CHARGE Syndrome: A PRISMA-Compliant Systematic Review and Meta-Analysis. The Supplementary Material 2 file includes the R code used for the meta-analysis, sensitivity analysis, subgroup analysis and meta-regression.
DOI: 10.17632/34pmm6tgg8
title: Supplemental Tables. Dupilumab and Neuropsychiatric Outcomes in Pediatric Atopic Dermatitis. JAAD.

description: Supplemental Tables 1 and 2 for "Dupilumab and neuropsychiatric outcomes in pediatric atopic dermatitis: A real-world cohort analysis" in JAAD.

Authors:

Maria Kaltchenko BA1, Sarah Radtke PhD2, Elle Kim MHS1, Joy Wan MD, MSCE1

Affiliations:

1Department of Dermatology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.

2Department of Child and Adolescent Psychiatry, Johns Hopkins University School of Medicine, Baltimore, MD, USA.

Supplemental Table 1. Codes used in defining the exposure and outcomes variables and covariates for propensity score matching.

Supplemental Table 2. Sensitivity analysis: 2-year incidence of neuropsychiatric comorbidities in children with AD aged &lt;18 years old treated with dupilumab versus methotrexate/cyclosporine/phototherapy, with no exclusion criteria for concurrent treatments.
DOI: 10.17632/7bsvck73ng
title: Data on undergraduate students’ self-regulation in online and blended learning environments during the COVID-19 pandemic in Indonesia

description: The questionnaires were distributed among 577 undergraduate students at a state university in Jakarta, Indonesia. This dataset contains data on students’ self-regulation in online and blended learning modes in the age of COVID-19. Self-regulated learning skills consist of six constructs including environment structuring, time management, goal setting, task strategies, help-seeking, and self-evaluation. The database provides valuable information about students' perceptions of self-regulated learning and can be used to find correlations between demographic variables and self-regulated learning constructs.
DOI: 10.17632/p8vhvwvsct
title: ms data set

description: MS analysis of proteins from 1A cells identified using immunoprecipitation with 2SC antibody and silver stained.
The samples are as follows: vehicle, Fumaric Acid (FA) (10mM), LCL768 (10 uM), and a combination of FA and LCL879.
DOI: 10.17632/wbdzyp3mcp
title: CVD in HIV data

description: The data contains parameters on cardiovascular risk factors among HIV patients.
DOI: 10.25403/upresearchdata.29118698.v1
title: The perceptions of patients regarding the impact of vaping and smoking on oral and systemic health

description: The study took the form of a cross-sectional questionnaire among patients at the University of Pretoria's Oral Health Centre, focusing on perceptions of vaping's effects on health. Data was collected over two days in September 2024. Eligible participants were over 16 years old. The sample size was 155, calculated using G-Power 3.1 and validated by a biostatistician and the research committee. Statistical analysis was conducted with IBM SPSS Statistics, and results were considered significant at p &lt; 0.05. Basic statistics were calculated using Microsoft Excel.
DOI: 10.6084/m9.figshare.12571703.v2
title: Impact Crater Simulations

description: Input Files for the code iSALE (http://www.isale-code.de/redmine/projects/isale/wiki/ISALE), used to model the formation of two simple craters.<br>The results were presented in:Martellato et al.: Martian Ice Revealed by Modeling of Simple Terraced Crater Formation, J Geophys Res: Planet<br>