cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4319371
title: Reflector heights in the Arctic permafrost areas measured by GNSS interferometric reflectometry

description: This dataset is about the measurements of reflector height, i.e., the vertical distance between receiver antenna and groud surface, at the GNSS sites in the Arctic permafrost areas. Each data file has four columns. The 1st and 2nd show the time as year and doy, respectively. The 3rd and 4th are the reflector height and its uncertainty, respectively.
DOI: 10.5517/ccdc.csd.cc24vsrk
title: CCDC 1991959: Experimental Crystal Structure Determination

description: Related Article: Werner Schlemmer, Philipp Nothdurft, Alina Petzold, Gisbert Riess, Philipp Frühwirt, Max Schmallegger, Georg Gescheidt-Demner, Roland Fischer, Stefan A. Freunberger, Wolfgang Kern, Stefan Spirk|2020|Angew.Chem.,Int.Ed.|59|22943|doi:10.1002/anie.202008253
DOI: 10.5517/ccdc.csd.cc25bsbn
title: CCDC 2006361: Experimental Crystal Structure Determination

description: Related Article: Tim Johannsen, Christopher Golz, Manuel Alcarazo|2020|Angew.Chem.,Int.Ed.|59|22779|doi:10.1002/anie.202009303
DOI: 10.5517/ccdc.csd.cc25bscp
title: CCDC 2006362: Experimental Crystal Structure Determination

description: Related Article: Tim Johannsen, Christopher Golz, Manuel Alcarazo|2020|Angew.Chem.,Int.Ed.|59|22779|doi:10.1002/anie.202009303
DOI: 10.5517/ccdc.csd.cc25bsdq
title: CCDC 2006363: Experimental Crystal Structure Determination

description: Related Article: Tim Johannsen, Christopher Golz, Manuel Alcarazo|2020|Angew.Chem.,Int.Ed.|59|22779|doi:10.1002/anie.202009303
DOI: 10.5517/ccdc.csd.cc25bsfr
title: CCDC 2006364: Experimental Crystal Structure Determination

description: Related Article: Tim Johannsen, Christopher Golz, Manuel Alcarazo|2020|Angew.Chem.,Int.Ed.|59|22779|doi:10.1002/anie.202009303
DOI: 10.5517/ccdc.csd.cc25bsgs
title: CCDC 2006365: Experimental Crystal Structure Determination

description: Related Article: Tim Johannsen, Christopher Golz, Manuel Alcarazo|2020|Angew.Chem.,Int.Ed.|59|22779|doi:10.1002/anie.202009303
DOI: 10.5517/ccdc.csd.cc25bsht
title: CCDC 2006366: Experimental Crystal Structure Determination

description: Related Article: Tim Johannsen, Christopher Golz, Manuel Alcarazo|2020|Angew.Chem.,Int.Ed.|59|22779|doi:10.1002/anie.202009303
DOI: 10.5517/ccdc.csd.cc25bsjv
title: CCDC 2006367: Experimental Crystal Structure Determination

description: Related Article: Tim Johannsen, Christopher Golz, Manuel Alcarazo|2020|Angew.Chem.,Int.Ed.|59|22779|doi:10.1002/anie.202009303
DOI: 10.5517/ccdc.csd.cc25bskw
title: CCDC 2006368: Experimental Crystal Structure Determination

description: Related Article: Tim Johannsen, Christopher Golz, Manuel Alcarazo|2020|Angew.Chem.,Int.Ed.|59|22779|doi:10.1002/anie.202009303
DOI: 10.5517/ccdc.csd.cc25bslx
title: CCDC 2006369: Experimental Crystal Structure Determination

description: Related Article: Tim Johannsen, Christopher Golz, Manuel Alcarazo|2020|Angew.Chem.,Int.Ed.|59|22779|doi:10.1002/anie.202009303
DOI: 10.5517/ccdc.csd.cc25bsmy
title: CCDC 2006370: Experimental Crystal Structure Determination

description: Related Article: Tim Johannsen, Christopher Golz, Manuel Alcarazo|2020|Angew.Chem.,Int.Ed.|59|22779|doi:10.1002/anie.202009303
DOI: 10.5517/ccdc.csd.cc25k2lf
title: CCDC 2012414: Experimental Crystal Structure Determination

description: Related Article: Jiraborrirak Charoenpattarapreeda, Stephen J. Walsh, Jason S. Carroll, David R. Spring|2020|Angew.Chem.,Int.Ed.|59|23045|doi:10.1002/anie.202010090
DOI: 10.5517/ccdc.csd.cc25k2mg
title: CCDC 2012415: Experimental Crystal Structure Determination

description: Related Article: Jiraborrirak Charoenpattarapreeda, Stephen J. Walsh, Jason S. Carroll, David R. Spring|2020|Angew.Chem.,Int.Ed.|59|23045|doi:10.1002/anie.202010090
DOI: 10.5517/ccdc.csd.cc25kg8h
title: CCDC 2012776: Experimental Crystal Structure Determination

description: Related Article: Jiraborrirak Charoenpattarapreeda, Stephen J. Walsh, Jason S. Carroll, David R. Spring|2020|Angew.Chem.,Int.Ed.|59|23045|doi:10.1002/anie.202010090
DOI: 10.5517/ccdc.csd.cc25vfyf
title: CCDC 2021415: Experimental Crystal Structure Determination

description: Related Article: Elizabeth M. L. Lippitt, Courtney Ennis, Stephen C. Moratti, Lyall R. Hanton|2020|Cryst.Growth Des.|20|7805|doi:10.1021/acs.cgd.0c01104
DOI: 10.5517/ccdc.csd.cc25vfzg
title: CCDC 2021416: Experimental Crystal Structure Determination

description: Related Article: Elizabeth M. L. Lippitt, Courtney Ennis, Stephen C. Moratti, Lyall R. Hanton|2020|Cryst.Growth Des.|20|7805|doi:10.1021/acs.cgd.0c01104
DOI: 10.5517/ccdc.csd.cc25vg0j
title: CCDC 2021417: Experimental Crystal Structure Determination

description: Related Article: Elizabeth M. L. Lippitt, Courtney Ennis, Stephen C. Moratti, Lyall R. Hanton|2020|Cryst.Growth Des.|20|7805|doi:10.1021/acs.cgd.0c01104
DOI: 10.5517/ccdc.csd.cc25vg1k
title: CCDC 2021418: Experimental Crystal Structure Determination

description: Related Article: Elizabeth M. L. Lippitt, Courtney Ennis, Stephen C. Moratti, Lyall R. Hanton|2020|Cryst.Growth Des.|20|7805|doi:10.1021/acs.cgd.0c01104
DOI: 10.5517/ccdc.csd.cc25vg2l
title: CCDC 2021419: Experimental Crystal Structure Determination

description: Related Article: Elizabeth M. L. Lippitt, Courtney Ennis, Stephen C. Moratti, Lyall R. Hanton|2020|Cryst.Growth Des.|20|7805|doi:10.1021/acs.cgd.0c01104
DOI: 10.5517/ccdc.csd.cc25vg3m
title: CCDC 2021420: Experimental Crystal Structure Determination

description: Related Article: Elizabeth M. L. Lippitt, Courtney Ennis, Stephen C. Moratti, Lyall R. Hanton|2020|Cryst.Growth Des.|20|7805|doi:10.1021/acs.cgd.0c01104
DOI: 10.5517/ccdc.csd.cc25vg4n
title: CCDC 2021421: Experimental Crystal Structure Determination

description: Related Article: Elizabeth M. L. Lippitt, Courtney Ennis, Stephen C. Moratti, Lyall R. Hanton|2020|Cryst.Growth Des.|20|7805|doi:10.1021/acs.cgd.0c01104
DOI: 10.5517/ccdc.csd.cc25vg5p
title: CCDC 2021422: Experimental Crystal Structure Determination

description: Related Article: Elizabeth M. L. Lippitt, Courtney Ennis, Stephen C. Moratti, Lyall R. Hanton|2020|Cryst.Growth Des.|20|7805|doi:10.1021/acs.cgd.0c01104
DOI: 10.5517/ccdc.csd.cc25vg6q
title: CCDC 2021423: Experimental Crystal Structure Determination

description: Related Article: Elizabeth M. L. Lippitt, Courtney Ennis, Stephen C. Moratti, Lyall R. Hanton|2020|Cryst.Growth Des.|20|7805|doi:10.1021/acs.cgd.0c01104
DOI: 10.5517/ccdc.csd.cc25vg7r
title: CCDC 2021424: Experimental Crystal Structure Determination

description: Related Article: Elizabeth M. L. Lippitt, Courtney Ennis, Stephen C. Moratti, Lyall R. Hanton|2020|Cryst.Growth Des.|20|7805|doi:10.1021/acs.cgd.0c01104
DOI: 10.21227/5qfg-ay83
title: complex exponiential signal

description: This data is used to test parameter estimation algorithms of complex exponiential signal with Gaussian White Noise. The data can be used to test RMSE of different SNR, N, and p value.
DOI: 10.21227/phsf-bn53
title: complex exponiential signal

description: This data is used to test parameter estimation algorithms of complex exponiential signal with Gaussian White Noise. The data can be used to test RMSE of different SNR, N, and p value.
DOI: 10.6084/m9.figshare.13365284
title: Single-nucleus chromatin accessibility landscape reveals diversity in regulatory regions across distinct adult rat cortex

description: A reference of snATAC-seq datasets for mammalian cortex tissues is important for the understanding of regulatory specificity and developmental abnormality caused by genetic or environmental alterations. Here, we report an adult rat ATAC-seq profile by producing a total of 11 snATAC-seq libraries profiles from 4 distinct cortex region of female rat. The snATAC-seq read enrichment, fragment size distribution, and reproducibility between replicates demonstrated the high quality of the full dataset.<br>
DOI: 10.6084/m9.figshare.13365284.v5
title: Single-nucleus chromatin accessibility landscape reveals diversity in regulatory regions across distinct adult rat cortex

description: A reference of snATAC-seq datasets for mammalian cortex tissues is important for the understanding of regulatory specificity and developmental abnormality caused by genetic or environmental alterations. Here, we report an adult rat ATAC-seq profile by producing a total of 11 snATAC-seq libraries profiles from 4 distinct cortex region of female rat. The snATAC-seq read enrichment, fragment size distribution, and reproducibility between replicates demonstrated the high quality of the full dataset.<br>
DOI: 10.6084/m9.figshare.13365284.v4
title: Single-nucleus chromatin accessibility landscape reveals diversity in regulatory regions across distinct adult rat cortex

description: A reference of snATAC-seq datasets for mammalian cortex tissues is important for the understanding of regulatory specificity and developmental abnormality caused by genetic or environmental alterations. Here, we report an adult rat ATAC-seq profile by producing a total of 11 snATAC-seq libraries profiles from 4 distinct cortex region of female rat. The snATAC-seq read enrichment, fragment size distribution, and reproducibility between replicates demonstrated the high quality of the full dataset.<br>
DOI: 10.6084/m9.figshare.13370501
title: Data Availability.xlsx

description: This is the pre-registered link
DOI: 10.6084/m9.figshare.13370501.v1
title: Data Availability.xlsx

description: This is the pre-registered link
DOI: 10.6084/m9.figshare.13370504.v1
title: Speedtest Open Data - Australia 2020-04-01 extract

description: This is an Australian extract of Speedtest Open data available at Amazon WS.<br>A world speedtest open data was dowloaded (&gt;400Mb, 7M lines of data). An extract of Australia's location (lat, long) revealed 88,000 lines of data (attached as csv).<br>A Jupyter notebook of extract process is attached.<br>Data Shows:- 3.1M speedtests- 762,000 devices- 88,000 grid locations (600m * 600m), summarised as a point- average speed 33.7Mbps (down), 12.4M (up)- Max speed 724Mbps- data is for 600m * 600m grids, showing average speed up/down, number of tests, and number of users (IP). Added centroid, and now lat/long.<br>See tweet of image of centroids also attached.
DOI: 10.6084/m9.figshare.13370548
title: Supplementary Tables from The evolution and genetics of sexually dimorphic ‘dual’ mimicry in the butterfly <i>Elymnias hypermnestra</i>

description: Sexual dimorphism is a major component of morphological variation across the tree of life, but the mechanisms underlying phenotypic differences between sexes of a single species are poorly understood. We examined the population genomics and biogeography of the common palmfly <i>Elymnias hypermnestra</i>, a dual mimic in which female wing colour patterns are either dark brown (melanic) or bright orange, mimicking toxic <i>Euploea</i> and <i>Danaus</i> species, respectively. As males always have a melanic wing colour pattern, this makes <i>E. hypermnestra</i> a fascinating model organism in which populations vary in sexual dimorphism. Population structure analysis revealed that there were three genetically distinct <i>E. hypermnestra</i> populations, which we further validated by creating a phylogenomic species tree and inferring historical barriers to gene flow. This species tree demonstrated that multiple lineages with orange females do not form a monophyletic group, and the same is true of clades with melanic females. We identified two SNPs near the colour patterning gene <i>WntA</i> that were significantly associated with the female colour pattern polymorphism, suggesting that this gene affects sexual dimorphism. Given that <i>WntA</i>'s role in colour patterning across Nymphalidae, <i>E. hypermnestra</i> females demonstrate the repeatability of the evolution of sexual dimorphism.
DOI: 10.6084/m9.figshare.13370548.v1
title: Supplementary Tables from The evolution and genetics of sexually dimorphic ‘dual’ mimicry in the butterfly <i>Elymnias hypermnestra</i>

description: Sexual dimorphism is a major component of morphological variation across the tree of life, but the mechanisms underlying phenotypic differences between sexes of a single species are poorly understood. We examined the population genomics and biogeography of the common palmfly <i>Elymnias hypermnestra</i>, a dual mimic in which female wing colour patterns are either dark brown (melanic) or bright orange, mimicking toxic <i>Euploea</i> and <i>Danaus</i> species, respectively. As males always have a melanic wing colour pattern, this makes <i>E. hypermnestra</i> a fascinating model organism in which populations vary in sexual dimorphism. Population structure analysis revealed that there were three genetically distinct <i>E. hypermnestra</i> populations, which we further validated by creating a phylogenomic species tree and inferring historical barriers to gene flow. This species tree demonstrated that multiple lineages with orange females do not form a monophyletic group, and the same is true of clades with melanic females. We identified two SNPs near the colour patterning gene <i>WntA</i> that were significantly associated with the female colour pattern polymorphism, suggesting that this gene affects sexual dimorphism. Given that <i>WntA</i>'s role in colour patterning across Nymphalidae, <i>E. hypermnestra</i> females demonstrate the repeatability of the evolution of sexual dimorphism.
DOI: 10.5281/zenodo.4319485
title: JGuan-lab/Cell-type-specific-predictive-model: First release of Cell-type-specific-predictive-model

description: This is the first release.
DOI: 10.5281/zenodo.4319508
title: Cell type-specific predictive model

description: The analyzed single-nucleus gene expression data of ASD and controls in the paper of "Prioritization of Genes and Gene Sets Associated with Autism Based on Cell Type-specific Predictive Models".
DOI: 10.5281/zenodo.4319484
title: Cell type-specific predictive model

description: The analyzed single-nucleus gene expression data of ASD and controls in the paper of "Prioritization of Genes and Gene Sets Associated with Autism Based on Cell Type-specific Predictive Models".
DOI: 10.6084/m9.figshare.13370498.v1
title: An ATAC-seq atlas of chromatin accessibility in rat tissues

description: The Norway rat (Rattus norvegicus) serves as a valuable model for investigating complex disorders and social behaviors due to its available previous researches and easily to characterize and quantify the different type of social behavior. However, a comprehensive profiling of epigenetic regulation in rats is lacking, which is essential for a deeper understanding of diseases and social behaviors. Here, we profiled chromatin accessibility using ATAC-seq (Assay for Transposase-Accessible Chromatin coupled with next-generation sequencing) of 10 body tissues and 12 brain regions from adult rats and produced a large collection of datasets with replicates. This comprehensive ATAC-seq atlas is consisted of 187,930 accessible elements. In addition, by comparing the open chromatin landscapes among rat tissues, a total of 24,238 tissue-specific peaks and a list of putative tissue-specific transcription factors are unbiasedly identified. We further showed that many established tissue-specific transcriptional characteristics have been recapitulated in this ATAC-seq atlas, indicating that our study may pave the way for future mechanistic discoveries in diseases and social behaviors using rat as a model.
DOI: 10.6084/m9.figshare.13370549
title: Supplementary material from 'The influence of QTL allelic diversity on QTL detection in multi-parent populations: a simulation study in sugar beet'

description: Datasets, R package software and script allowing to reproduce the simulation scheme proposed in the article.<br>The file EUNAM_Dent_parents_subset_genotypes.txt contains a selection of parent genotype data from maize the EU-NAM Dent population (Bauer et al., 2013) obtained at http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE50558.<br>The file EUNAM_Dent_parents_markers_subset_genetic_map.txt contains the genetic map information (marker name, chromosome, position in cM) of the marker calculated by Giraud et al. (2014) subset obtained at: http://maizegdb.org/data_center/reference?id=9024747<br>The file mppSim_0.1.0.zip is the R package used for the simulation.<br>The file add_file_4_simulation_reproduction.R is the R script enabling the reproduction of the simulation.<br>References<br>Bauer, E., Falque, M., Walter, H., Bauland, C., Camisan, C., Campo, L., ... & Altmann, T. (2013). Intraspecific variation of recombination rate in maize. Genome biology, 14(9), R103.<br><br>Giraud, H., Lehermeier, C., Bauer, E., Falque, M., Segura, V., Bauland, C., ... & Schipprack, W. (2014). Linkage disequilibrium with linkage analysis of multiline crosses reveals different multiallelic QTL for hybrid performance in the flint and dent heterotic groups of maize. <i>Genetics</i>, <i>198</i>(4), 1717-1734.<br>
DOI: 10.5281/zenodo.4319569
title: Water stable isotope data for the Kafué River (Zambia), 2012-2013.

description: This dataset contains oxygen stable isotope data on surface water samples collected on the Kafué River (Zambia) between February 2012 and November 2013These data were collected within the framework of ERC-StG AFRIVAL: African river basins: catchment-scale carbon fluxes and transformations (2009-2014) Ancillary data and site information can be found in : Teodoru CR, Nyoni FC, Borges AV, Darchambeau F, Nyambe I, & Bouillon S (2015) Dynamics of greenhouse gases (CO2, CH4, N2O) along the Zambezi River and major tributaries, and their importance in the riverine carbon budget. Biogeosciences 12: 2431-2453 https://bg.copernicus.org/articles/12/2431/2015/
DOI: 10.5281/zenodo.4319568
title: Water stable isotope data for the Kafué River (Zambia), 2012-2013.

description: This dataset contains oxygen stable isotope data on surface water samples collected on the Kafué River (Zambia) between February 2012 and November 2013These data were collected within the framework of ERC-StG AFRIVAL: African river basins: catchment-scale carbon fluxes and transformations (2009-2014) Ancillary data and site information can be found in : Teodoru CR, Nyoni FC, Borges AV, Darchambeau F, Nyambe I, & Bouillon S (2015) Dynamics of greenhouse gases (CO2, CH4, N2O) along the Zambezi River and major tributaries, and their importance in the riverine carbon budget. Biogeosciences 12: 2431-2453 https://bg.copernicus.org/articles/12/2431/2015/
DOI: 10.6084/m9.figshare.13370570
title: Raw Data File from The development of affiliative and coercive reproductive tactics in male chimpanzees

description: This file contains all raw data analyzed in this publication. Two datasets are provided, each in a separate sheet within this MS Excel file. One sheet comprises data on the social interactions between 30 adolescent and young adult male chimpanzees and 78 females, where each row represents a distinct male-female pair and each column a variable measured for that pair. The second sheet comprises paternity and maternity data for 105 offpsring where each row represents and offspring and each column variables measured for that offspring.
DOI: 10.6084/m9.figshare.13370570.v1
title: Raw Data File from The development of affiliative and coercive reproductive tactics in male chimpanzees

description: This file contains all raw data analyzed in this publication. Two datasets are provided, each in a separate sheet within this MS Excel file. One sheet comprises data on the social interactions between 30 adolescent and young adult male chimpanzees and 78 females, where each row represents a distinct male-female pair and each column a variable measured for that pair. The second sheet comprises paternity and maternity data for 105 offpsring where each row represents and offspring and each column variables measured for that offspring.
DOI: 10.6084/m9.figshare.13370573.v1
title: Analysis Tables from The development of affiliative and coercive reproductive tactics in male chimpanzees

description: This file contains the results of all statistical analyses we conducted. Each series of analyses is presented in an individual sheet within the MS Excel file and each sheet contains a caption detailing its contents.
DOI: 10.6084/m9.figshare.13370573
title: Analysis Tables from The development of affiliative and coercive reproductive tactics in male chimpanzees

description: This file contains the results of all statistical analyses we conducted. Each series of analyses is presented in an individual sheet within the MS Excel file and each sheet contains a caption detailing its contents.
DOI: 10.6084/m9.figshare.13370579
title: Table S3 from Comparative genomics reveals high rates of horizontal transfer and strong purifying selection on rhizobial symbiosis genes

description: The 143 symbiosis genes from all four categories with their annotations.
DOI: 10.6084/m9.figshare.13370579.v1
title: Table S3 from Comparative genomics reveals high rates of horizontal transfer and strong purifying selection on rhizobial symbiosis genes

description: The 143 symbiosis genes from all four categories with their annotations.
DOI: 10.6084/m9.figshare.13370588.v1
title: Table S1 from Comparative genomics reveals high rates of horizontal transfer and strong purifying selection on rhizobial symbiosis genes

description: NCBI accession numbers, species names, assembly completeness, and genome size statistics for all strains included in the OrthoFinder analysis.
DOI: 10.6084/m9.figshare.13370585.v1
title: Table S5 from Comparative genomics reveals high rates of horizontal transfer and strong purifying selection on rhizobial symbiosis genes

description: Table of summary statistics and annotations for all genes, both symbiosis and non-symbiosis.
DOI: 10.6084/m9.figshare.13370588
title: Table S1 from Comparative genomics reveals high rates of horizontal transfer and strong purifying selection on rhizobial symbiosis genes

description: NCBI accession numbers, species names, assembly completeness, and genome size statistics for all strains included in the OrthoFinder analysis.
DOI: 10.6084/m9.figshare.13370585
title: Table S5 from Comparative genomics reveals high rates of horizontal transfer and strong purifying selection on rhizobial symbiosis genes

description: Table of summary statistics and annotations for all genes, both symbiosis and non-symbiosis.
DOI: 10.13140/rg.2.2.12525.41448
title: HTC Cr TM T05 S085.007
DOI: 10.5281/zenodo.4319598
title: Model output data for Fujimori et al., Impacts of GHG emissions abatement measures on agricultural market and food security

description: Model output data for "Fujimori et al., Impacts of GHG emissions abatement measures on agricultural market and food security" submitted to Nature Food
DOI: 10.5281/zenodo.4319438
title: Model output data for Fujimori et al., Impacts of GHG emissions abatement measures on agricultural market and food security

description: Model output data for "Fujimori et al., Impacts of GHG emissions abatement measures on agricultural market and food security" submitted to Nature Food
DOI: 10.5519/qd.27cl6me1
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2 records)
DOI: 10.15161/oar.it/73336
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.
DOI: 10.21227/4gxe-x422
title: Sintel 4D Light Field Video dataset

description: A medium-scale synthetic 4D Light Field video dataset for depth (disparity) estimation.Light Field video:23 synthetic scenes1,204x436 pixels9x9 views20--50 frames
DOI: 10.6084/m9.figshare.13370639
title: results.zip

description: result files