cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8091274
title: Multimodal learning of noncoding variant effects using genome sequence and chromatin structure

description: ncVarPred-1D3D: pretrained models of Sei (PMID: 35817977) + our 3D structure embedding models are shared. The models are trained and validated using DeepSEA (PMID: 26301843) selected 200 bp regions (we extended to 4K bp neighboring) to predict the epigenetic profile containing 21907 epigenetic events Sei processed. The pretrained DeepSEA (PMID: 26301843) and reproduced DanQ (PMID: 27084946) can be found in SOTA.tar.gz.
description: {"references": ["Tan, Wuwei, and Yang Shen. \"Multimodal learning of noncoding variant effects using genome sequence and chromatin structure.\" bioRxiv (2022): 2022-12."]}
DOI: 10.5281/zenodo.8226089
title: Multimodal learning of noncoding variant effects using genome sequence and chromatin structure

description: ncVarPred-1D3D: pretrained models of Sei (PMID: 35817977) + our 3D structure embedding models are shared. The models are trained and validated using DeepSEA (PMID: 26301843) selected 200 bp regions (we extended to 4K bp neighboring) to predict the epigenetic profile containing 21907 epigenetic events Sei processed. The pretrained DeepSEA (PMID: 26301843) and reproduced DanQ (PMID: 27084946) can be found in SOTA.tar.gz.
description: {"references": ["Tan, Wuwei, and Yang Shen. \"Multimodal learning of noncoding variant effects using genome sequence and chromatin structure.\" bioRxiv (2022): 2022-12."]}
DOI: 10.57745/lj4yq3
title: Data_May 2022.zip

description: :unav
DOI: 10.57745/xazq7o
title: data_July2022.zip

description: :unav
DOI: 10.57745/yhart9
title: Data _March2021.zip

description: :unav
DOI: 10.57745/p474gz
title: Simplified Data Sample.zip

description: Jeu de données simplifié
DOI: 10.48567/hf12-c157
title: Marble Point Automatic Weather Station, 2000 quality-controlled observational data.
DOI: 10.6084/m9.figshare.23907570
title: 20230809_starrydata2

description: All data on Starrydata2, a database of experimental properties in the field of inorganic materials
DOI: 10.6084/m9.figshare.23907570.v1
title: 20230809_starrydata2

description: All data on Starrydata2, a database of experimental properties in the field of inorganic materials
DOI: 10.6084/m9.figshare.23792385.v4
title: Extended data- Example of participants' responses, Native Speaker Group (NSG)

description: This is part of the extended data for the article entitled "L2 Acquisition of <i>Wh-</i>interrogatives at the Syntax-discourse Interface: Interface Hypothesis again", by Mohammed Shormani
DOI: 10.25345/c5g737f04
title: MassIVE MSV000092619 - Untargeted comparative metabolomics of WT vs ACOT-15 endo-metabolome in C. elegans
title: This study focuses on the untargeted comparative metabolomics analysis of the eno-metabolome of both WT and acot-15 mutant C. elegans worms. Hydroxylamine was used to treat certain samples to capture the reactive electrophilic metabolites.
DOI: 10.21227/by17-5g53
title: Spectral Signatures

description: A spectral signatures database of major crops in the East Mediterranean basin was created to support remote sensing applications specifically satellite hyperspectral and multispectral image classification. Moreover, it can be used to compute many important hyperspectral vegetation indices such as:Atmospherically Resistant Vegetation Index (ARVI)Modified Chlorophyll Absorption Ratio Index (MCARI)Modified Chlorophyll Absorption Ratio Index - Improved (MCARI2)Modified Red Edge Normalized Difference Vegetation Index (MRENDVI)Modified Red Edge Simple Ratio (MRESR)Modified Triangular Vegetation Index (MTVI)Modified Triangular Vegetation Index - Improved (MTVI2)Red Edge Normalized Difference Vegetation Index (RENDVI)The collection of spectral signatures was achieved using fieldwork and an advanced SpectroRadiometer that is currently available in the Remote Sensing Center in Lebanon (ASD FIeldSpec 4 HiRes). The device covers the spectrum from the visible to shortwave ranges (350 to 2550 nanometers).
DOI: 10.6073/pasta/34d11929c217c6bc3fdbce95cf8ea5ed
title: Bulk atmospheric deposition data along an agricultural-to-urban transect, central Ohio, 2021-2022

description: As precipitation acidity in the United States has decreased dramatically over the past forty years, new questions have emerged about the role of base cations and nitrogen (N) species in regulating precipitation pH. To address these questions, we studied precipitation chemistry in Ohio, a state with high N deposition and a mix of urban, industrial, and agricultural land use. This dataset contains precipitation chemistry and the flux of particulate matter collected at four sites along an agricultural-urban transect in central Ohio over the summers of 2021 and 2022. Samples were collected weekly from three or five replicate passive bulk deposition collectors at each site. In the lab, we filtered the samples and calculated the flux of total particulate matter. Liquid samples were measured for pH, nitrate, ammonium, and major ions. This dataset is complete and will not be added to in the future.
DOI: 10.5066/p9tf4oe4
title: Bathymetry and Velocity Data from Surveys at Highway Bridges Crossing the Missouri River between Kansas City and St. Louis, Missouri, May 19-26, 2021

description: These data are high-resolution bathymetry (riverbed elevation) and depth-averaged velocities in comma-delimited table format, generated from hydrographic and velocimetric surveys near highway bridge structures over the Missouri River between Kansas City and St. Louis, Missouri, May 19&amp;amp;ndash;26, 2021. Hydrographic data were collected using a high-resolution multibeam echosounder mapping system (MBMS), which consists of a multibeam echosounder (MBES) and an inertial navigation system (INS) mounted on a marine survey vessel. Data were collected as the vessel traversed the river along planned survey lines distributed throughout the reach. Data collection software integrated and stored the depth data from the MBES and the horizontal and vertical position and attitude data of the vessel from the INS in real time. Data processing required specialized computer software to extract bathymetry data from the raw data files and to summarize and map the information. Velocity data for the surveys were collected using an acoustic Doppler current profiler (ADCP) mounted on a survey vessel equipped with a differential global positioning system (DGPS). Velocity data were collected for all sites except site 14 at Lexington due to a faulty ADCP unit. Data were collected as the vessel traversed the river along seven planned transect lines distributed throughout the reach. Velocity data were processed using the Velocity Mapping Toolbox (Parsons and others, 2013), and smoothed using neighboring nodes. There is a zip file for each of the 8 surveyed sites available for download containing the bathymetric data and depth-averaged velocities. The files follow the format of &amp;amp;quot;site-##_MissouriRiver_HWY#_2021-05.zip&amp;amp;quot;, where &amp;amp;quot;site-##&amp;amp;quot; is the site number from 14 to 21 and &amp;amp;quot;HWY#&amp;amp;quot; is the highway type and route number. The zip files each contain two comma-delimited text files, one with the bathymetry and uncertainty data and one with the depth-averaged velocity data (except for site 14 due to the faulty ADCP unit), as well as associated metadata and thumbnail images. Reference cited: Parsons, D.R., Jackson, P.R., Czuba, J.A., Engel, F.L., Rhoads, B.L., Oberg, K.A., Best, J.L., Mueller, D.S., Johnson, K.K., and Riley, J.D., 2013, Velocity Mapping Toolbox (VMT) A process and visualization suite for moving-vessel ADCP measurements: Earth Surface Processes and Landforms, v. 38, no. 11, p. 1244-1260. [Also available at https://doi.org/10.1002/esp.3367.]
DOI: 10.6073/pasta/a1b7791376a04ce8c6ea9043547bb6af
title: Plot-level field data and model simulation results, archived to accompany Turner et al. manuscript; reports data from summer 2017 sampling of short-interval fires that burned during summer 2016 in Greater Yellowstone.

description: Subalpine forests in the northern Rocky Mountains have been resilient to stand-replacing fires that historically burned at 100–300-yr intervals. Fire intervals are projected to decline drastically as climate warms, and forests that reburn before recovering from previous fire may lose their ability to rebound. We studied recent fires in Greater Yellowstone (Wyoming, USA) and asked whether short-interval (less than 30 yrs) stand-replacing fires can erode lodgepole pine (Pinus contorta var. latifolia) forest resilience via increased burn severity, reduced early postfire tree regeneration, reduced carbon stocks, and slower carbon recovery. During 2016, fires reburned young lodgepole pine forests that regenerated after wildfires in 1988 and 2000. During 2017, we sampled 0.25-ha plots in stand-replacing reburns (n=18) and nearby young forests that did not reburn (n=9). We also simulated stand development with and without reburns to assess carbon recovery trajectories. Nearly all prefire biomass was combusted ("crown fire plus") in some reburns in which prefire trees were dense and small (≤ 4 cm basal diameter). Postfire tree seedling density was reduced six-fold relative to the previous (long-interval) fire, and high-density stands (greater than 40,000 stems ha-1) were converted to sparse stands (less than 1,000 stems ha-1). In reburns, coarse wood biomass and aboveground carbon stocks were reduced by 65% and 62%, respectively, relative to areas that did not reburn. Increased carbon loss plus sparse tree regeneration delayed simulated carbon recovery by greater than 150 yrs. Forests did not transition to nonforest, but extreme burn severity and reduced tree recovery foreshadow an erosion of forest resilience.
DOI: 10.26025/1912/66651
title: Hudson River estuary 2004 field experiment

description: This dataset includes data from moorings and shipboard observations in the Hudson River estuary during the spring and summer of 2004. The moorings were deployed in the thalweg at 7 sites for 108 days and included a combination of bottom temperature, conductivity, and pressure measurements as well as upward-looking ADCPs. Each mooring site also had near-surface temperature and conductivity measurements. Shipboard CTD surveys were carried out along the estuary on 7 days just after the deployment and just before the recovery of the moorings.
DOI: 10.5519/qd.bov1yi8a
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (904 records)
DOI: 10.5066/p9antbof
title: Glacier Waterton International Peace Park bighorn sheep (Ovis canadensis), 2002-2012

description: From 2002 to 2011, 94 bighorn sheep were collared to collect GPS locations for approximately a year.
DOI: 10.6084/m9.figshare.23907633
title: <b>Supplementary Material – </b><b>Seasonal Semideciduous Forest and Cerrado Floristic composition of fragments in Serra das Flores, Ibiapaba Plateau, Ceará, Brazil</b>

description: <b>Table S1 – </b><b>Floristic list of the species of Serra das Flores, Viçosa do Ceará-CE.</b><b>This Supplementary Material is part of the Original Paper published at Rodriguesia - DOI: </b><b>http://dx.doi.org/10.1590/2175-7860202374048</b>
DOI: 10.5517/ccdc.csd.cc2g7yvj
title: CCDC 2271768: Experimental Crystal Structure Determination

description: Related Article: Lu-Mei Dai, Ri-Zhen Huang, Jinjin Zhu, Zi-Shuo Song, Zhao-Guo Hong, Feng Qin, Hengshan Wang|2023|J.Mol.Struct.|1293|136240|doi:10.1016/j.molstruc.2023.136240
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g7ywk
title: CCDC 2271769: Experimental Crystal Structure Determination

description: Related Article: Lu-Mei Dai, Ri-Zhen Huang, Jinjin Zhu, Zi-Shuo Song, Zhao-Guo Hong, Feng Qin, Hengshan Wang|2023|J.Mol.Struct.|1293|136240|doi:10.1016/j.molstruc.2023.136240
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gm6v5
title: CCDC 2282587: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Eugene L. Kolychev, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gm6w6
title: CCDC 2282588: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Eugene L. Kolychev, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gm6x7
title: CCDC 2282589: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Eugene L. Kolychev, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gm6y8
title: CCDC 2282590: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Eugene L. Kolychev, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gm6z9
title: CCDC 2282591: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Eugene L. Kolychev, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmh1n
title: CCDC 2282841: Experimental Crystal Structure Determination

description: Related Article: W. Clegg, J.D. Kennedy, K. Nestor, M. Thornton-Pett, J. Holub|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmlrg
title: CCDC 2282956: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Andrea Winkler, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmlsh
title: CCDC 2282957: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Andrea Winkler, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmltj
title: CCDC 2282958: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Andrea Winkler, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmlvk
title: CCDC 2282959: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Andrea Winkler, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmlwl
title: CCDC 2282960: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Andrea Winkler, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmlxm
title: CCDC 2282961: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Andrea Winkler, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmlyn
title: CCDC 2282962: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Andrea Winkler, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmmlb
title: CCDC 2282982: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Miguel Silva Valverde, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmmmc
title: CCDC 2282983: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Miguel Silva Valverde, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmmnd
title: CCDC 2282984: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Miguel Silva Valverde, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmmpf
title: CCDC 2282985: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Miguel Silva Valverde, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmmqg
title: CCDC 2282986: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Miguel Silva Valverde, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gmmrh
title: CCDC 2282987: Experimental Crystal Structure Determination

description: Related Article: Peter G. Jones, Matthias Freytag, Miguel Silva Valverde, Matthias Tamm|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.