cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.80df776/2
title: Valve size measurements of drilled and not drilled on Togoina argentinensis from the Danian of Argentina.

description: The valve size measurements on Togoina argentinensis (drilled and not drilled specimens) from the Danian (Roca and Jagüel formations) of Argentina and the type of valve found are indicated.
DOI: 10.5061/dryad.8fq4mf6/1
title: morphoFullTaxo

description: The morphological data, log-transformed, used in the analysis
DOI: 10.5061/dryad.9387k41/15
title: Supplementaries 2-5
DOI: 10.5061/dryad.9387k41/16
title: Supplementary 6
DOI: 10.5061/dryad.9387k41/17
title: Supplementary 7
DOI: 10.5061/dryad.9387k41/18
title: Supplementary 8
DOI: 10.5061/dryad.9387k41/19
title: Supplementary 9
DOI: 10.5061/dryad.bd203r4/1
title: Supporting Information for "The hatching mechanism of 130-million-year-old insects: an association of neonates, egg shells, and egg bursters in Lebanese amber"

description: This Supporting Information document contains a single Supplementary File including Supplementary Text (“Review on egg bursters” and “Extended data for Figure 6”), Supplementary Table 1 (“Morphological features of the egg in extant neuropterid taxa”), and Supplementary References.
DOI: 10.5061/dryad.dt1h407/10
title: Wind_tunnel

description: Data from the wind tunnel experiment. Refer to METADATA file for description.
DOI: 10.5061/dryad.p65mc58/21
title: ANSE_caribtehuan

description: Caribbean silky anole localities used for Tehuantepec-only ENMs
DOI: 10.5061/dryad.pt70k51/1
title: Acoustic features of Sorex unguiculatus

description: The file includes two sheets.(1) Acoustic feature of calls: Acoustic feature such as call duration and mean dominant frequency of calls emitted by shrews;(2) Number of calls: The number of calls emitted by shrews.
DOI: 10.5061/dryad.q8d17km/1
title: R script – estimate of seed dispersal and correction

description: This R script shows how we estimated the number of seeds dispersed by tapirs per ha/year in our study area. Additionally, it shows how we adjusted our estimate to account for the fact that we sampled just 10 pellets per dung clump.
DOI: 10.5061/dryad.qg8vf45/2
title: Alignments

description: This is the nucleotide alignments used in Song et al. (in review) USYB-2018-080
DOI: 10.5061/dryad.qg8vf45/4
title: Supplementary Material-USYB-2018-080-R1

description: This file include all Supplementary Tables S1-S3 and Supplementary Figures S1-S4
DOI: 10.5061/dryad.r2t034g/1
title: dataset_fukano.et.al.
DOI: 10.5061/dryad.v5f76v4/1
title: Species_cover_exp_subplots

description: Species cover in unburned (UB) and burned (B) experimental subplots before (2004) and after (2007, 2009, and 2013) treatment. Includes 30 meadow species present in at least 1% of samples (subplots or transects x sampling dates).
DOI: 10.5061/dryad.v5f76v4/2
title: Species_cover_RM

description: Species cover in the 117 reference-meadow transects sampled in 2013. Includes 30 meadow species present in at least 1% of samples (subplots or transects x sampling dates).
DOI: 10.5061/dryad.v5f76v4/3
title: GF_cover-richness_exp_subplots

description: Growth-form cover and richness in unburned (UB) and burned (B) experimental subplots sampled before (2004) and after (2007, 2009, and 2013) treatment.
DOI: 10.5061/dryad.v5f76v4/4
title: GF_cover-richness_RM

description: Growth-form cover and richness in the 117 reference-meadow transects sampled in 2013.
DOI: 10.5061/dryad.v5f76v4/5
title: Burn_severity

description: Post-burn estimates of burn severity.
DOI: 10.5061/dryad.v5f76v4/6
title: Distance_to_RM

description: Mean compositional (Bray-Curtis) dissimilarity and structural (Euclidean) distance of experimental subplots to reference meadows before (2004) and after (2007, 2009, and 2013) treatment.
DOI: 10.5061/dryad.v5f76v4/7
title: Within-plot_heterogeneity

description: Within-plot heterogeneity of species composition (Bray-Curtis dissimilarity) and community structure (Euclidean distance) before (2004) and after (2007, 2009, and 2013) treatment.
DOI: 10.5061/dryad.1mv3348/1
title: songAnalysis

description: An R file showing how the analyses from the study were performed
DOI: 10.5061/dryad.1mv3348/2
title: SongComplexityData

description: The raw data for the study.
DOI: 10.5061/dryad.2b1r2sh/1
title: Full Septin Alignment

description: Alignment of whole septin protein sequences from included species.
DOI: 10.5061/dryad.2b1r2sh/2
title: Ultrametric Species Tree

description: Species tree made ultrametric with r8s based on orthologous protein sequences.
DOI: 10.5061/dryad.2b1r2sh/3
title: Alicut processed septin alignment

description: Septin alignment after processing with Alicut using window size of 12
DOI: 10.5061/dryad.2b1r2sh/4
title: jPrime MCCT septin phylogeny
DOI: 10.5061/dryad.2b1r2sh/5
title: MrBayes septin phylogeny
DOI: 10.5061/dryad.2b1r2sh/6
title: RAxML Septin phylogeny
DOI: 10.5061/dryad.2k24525/1
title: raw data on gene expression and thrips performance on sweet pepper plants

description: This excel data file contains one worksheet per figure presented in the manuscript and in the supplementary information. Variable names, and levels are explained in the last worksheet, named "readme"
DOI: 10.5061/dryad.2k4m170/1
title: 16S-raw-.001-abundance.representative.sequences

description: This fasta file includes 16S sequence data from different environmental samples. Within QIIME2, DADA2 was used to remove primer sequences from the reads, perform error correction, identify sequence variants, and remove chimeric sequences. Sequence variants were then classified by a naive Bayes classifier within QIIME2 using release of 128 of the Silva SSU database. An abundance filter was applied, and sequence variants that did not compose at least 0.1% of at least one library were removed from all libraries. The fasta file includes all variants that passed the abundance filter.
DOI: 10.5061/dryad.2k4m170/2
title: ITS-dna-sequences

description: Following ITS sequencing, reads were demultiplexed using the 2017.10 release of QIIME2 requiring a barcode match. Because the forward and reverse reads do not overlap for this amplicon, DADA2 was used to trim forward and reverse reads to 200 and 100bp respectively. Cutadapt was used to trim primer sequences from the sequence variants identified by DADA2. Sequences that did not contain these primer sequences were discarded. VSEARCH was used to perform de novo chimera detection and removal. The remaining ITS sequence variants were clustered into operational taxonomic units (OTUs) at 97% similarity using Abundant OTU+. The software package ITSx was then used to filter non-ITS and non-fungal OTUs from our data set.
DOI: 10.5061/dryad.2qj6g41/1
title: WolfSpiders_Data_Macronutrients_Oikos
DOI: 10.5061/dryad.4fq355k/4
title: description of samples
DOI: 10.5061/dryad.4fq355k/5
title: R code
DOI: 10.5061/dryad.53mp5ng/1
title: Red mangrove chloroplast DNA sequence alignment

description: This is a fasta alignment of the chloroplast genome sequences for 50 red mangrove individuals
DOI: 10.5061/dryad.53mp5ng/2
title: White mangrove chloroplast DNA sequence alignment

description: This is a fasta alignment of the chloroplast genome sequences for 50 white mangrove individuals
DOI: 10.5061/dryad.53mp5ng/3
title: Red mangrove nuclear DNA sequence alignment

description: This is a fasta file containing nuclear (RAD-Seq) DNA sequences for 122 red mangrove individuals
DOI: 10.5061/dryad.53mp5ng/4
title: White mangrove nuclear DNA sequence alignment

description: This is a fasta file containing nuclear (RAD-Seq) DNA sequences for 54 white mangrove individuals
DOI: 10.5061/dryad.6796b9j/2
title: Transcriptome_Analysis_additional_files
DOI: 10.5061/dryad.6796b9j/3
title: Supplementary videos 1-7
DOI: 10.5061/dryad.6d5046c/2
title: Carcass persistence and discovery data from a scavenging experiment

description: Data comes from a scavenging experiment conducted in Tasmania, Australia, to investigate the effects of Tasmanian devil population declines on community-wide carrion consumption. Tasmanian pademelon (Thylogale billardierii) 
carcasses were experimentally placed at 96 locations among twelve independent study sites. 

This dataset was used for survival analysis. See the paper for detailed methodology.
DOI: 10.5061/dryad.bj83h5d/1
title: Data for project entitled "Convergent evolution of the army ant syndrome and congruence in big-data phylogenetics" by Marek L. Borowiec

description: This compressed file contains sequence files, alignments, configuration files, and output of analyses, including phylogenetic trees from the study.
DOI: 10.5061/dryad.hk1h26n/1
title: Data and R codes for the analyses

description: The file "data.xlsx" contains a description of the variables (sheet "metadata") and data used for the analyses (sheet "data"). The analyses can be performed using the R code provided in the zip file, starting with the R file "data_extraction.R".
DOI: 10.5061/dryad.k31vr19/1
title: Two Erythroxylaceae trees

description: Astral II lineage tree and ML Concat tree inferred from 427 genes for 81 Erythroxylaceae individuals.
DOI: 10.5061/dryad.k31vr19/2
title: Gene alignments and concatenated matrix

description: Alignments for 427 gene trees, concatenated sequence matrix, and concat partition file.
DOI: 10.5061/dryad.p2d00sf/1
title: Dryad_Woody_leaf_traits

description: This file includes the leaf traits included in this publicatio
DOI: 10.5061/dryad.p2d00sf/2
title: Dryad_Spine_dens_BI

description: This file includes spine length, spine density and branching density.
DOI: 10.5061/dryad.p2d00sf/3
title: Dryad_Branching_BSI_SLA

description: This file includes bite size index, and branching data
DOI: 10.5061/dryad.p2d00sf/4
title: Dryad_Growth

description: This file includes growth data
DOI: 10.5061/dryad.p2d00sf/5
title: Dryad_available_Nitrogen

description: This file includes available nitrogen data
DOI: 10.5061/dryad.p65mc58/1
title: ANSE_RAxML_infile

description: Infile for RAxML analyses for 75 silky anoles + 1 outgroup (Anolis laeviventris)
DOI: 10.5061/dryad.p65mc58/2
title: ANSE_RAxML_result

description: Output for RAxML analysis of 75 silky anoles + 1 outgroup (Anolis laeviventris)
DOI: 10.5061/dryad.p65mc58/22
title: ANSE_pactehuan

description: Pacific silky anole localities used for Tehuantepec-only ENMs
DOI: 10.5061/dryad.p65mc58/3
title: infile_ANSE_mrbayes

description: Infile for MrBayes analyses for 75 silky anoles + 1 outgroup (Anolis laeviventris), including partitions
DOI: 10.5061/dryad.p65mc58/4
title: ANSE_consensus_mrbayes

description: MrBayes consensus results for analysis of 75 silky anoles + 1 outgroup (Anolis laeviventris)
DOI: 10.5061/dryad.p65mc58/5
title: ANSE_samplingforDryad

description: File with coordinates and field/museum numbers for localities used in phylogeographic analyses and generating ecological niche models.
DOI: 10.5061/dryad.p65mc58/6
title: DHL412_R1.fq

description: Raw Illumina reads for DHL412
DOI: 10.5061/dryad.p65mc58/7
title: DHL413_R1.fq

description: Raw Illumina reads for DHL413
DOI: 10.5061/dryad.pf68071/1
title: Local and Landscape Site information

description: Site-level ground cover and landscape composition data.  Local variables:  columns 4-8, landscape variables 9-13.
DOI: 10.5061/dryad.pf68071/2
title: Individual Bee Data

description: Sampling data for all bees collected, including location, date collected, trap type, species, and sex
DOI: 10.5061/dryad.pf68071/3
title: Floral Count and Species Data

description: Local floral cover data.  Total number of inflorescences per species counted within 30 1-m2 quadrats within a 50 m2 plot at each site and sampling date. Column names use USDA plant codes to designate each species.  X's indicate morphospecies.
DOI: 10.5061/dryad.pj319sn/1
title: Metadata

description: Describes abbreviations, units, sampling details and indicates sources of additional information in the publication for the three data files.
DOI: 10.5061/dryad.pj319sn/3
title: Fig 3 Data

description: Bee flight buzz density and light intensity during the eclipse in two regions used for environmental monitoring
DOI: 10.5061/dryad.q8d17km/2
title: Additional clumps data

description: This file contains data from the additional sampling of clumps we did to correct our estimate of the number of seeds dispersed per ha/year. It is necessary to run the R script with this estimate analysis
DOI: 10.5061/dryad.q8d17km/3
title: Raw data

description: This file contains all raw data collected in the field used in the analyses of this study. Abbreviations of the 'Treatment plot' column are as follows, according to the article: B1yr = burned annually; B3yr = burned triennially.
DOI: 10.5061/dryad.qd504d9/1
title: Ontiri et al 2018 Lion Killing

description: Quantitative results of 213 focus group discussions, describing: 1. Numeric identifier for focus group community; 2. Number of livestock lost to drought; 3. livestock lost to disease; 4. livestock lost to predators; 5. livestock lost to theft; 6. livestock lost in the wild (to unknown cause); 7. admission of number of lions speared; 8. admission of number of lions poisoned; 9. whether livestock taken by lion; 10. taken by cheetah; 11. taken by leopard; 12. taken by hyena; 13. taken by dog; 14. taken by jackal; 15 region of Kenya in which focus group took place.
DOI: 10.5061/dryad.r3117t8/1
title: Data for fear recovery in minnows

description: There are three datasheets. The first is all data on observers across treatments. The second contains data on models across treatments on day 9 of the experiment. The third contains data on replacement models at different time periods.
DOI: 10.5061/dryad.s325n4d/1
title: Samas_et_al_Behav_Ecol_2019_data
DOI: 10.17632/7t7yh99j5b.1
title: Data for: Distinctive microbial communities imply the main mechanism in a MEOR trial in high pour-point reservoir

description: Figures and Tables in the article
DOI: 10.17632/b5zhntwbzf.1
title: Data for: Inequality in Body Mass Indices across Countries: Evidence from Convergence Tests

description: The dataset contains one estimate of the average adult body-mass index per gender and five aggregate variables for 172 countries for the period 1975-2014. The BMI estimates come from the database of NCD Risk Factor Collaboration (NCD-RisC; 2016). The aggregate variables are: globalization index, real gross domestic product (GDP), population, human capital index, and urbanization rates. To estimate average BMIS, the NCD-RisC use information from 1698 population-based data sources, with more than 19.2 million adult participants (9.9 million men and 9.3 million women) in 200 countries and territories between 1975 and 2014. These BMI series are not available on NCD-RisC website.
DOI: 10.17632/n3xxp2h8jt.1
title: Data for: Enhanced Principal Tensor Analysis as a tool for 3-way geological data reconstructions

description: The folder PTA_SSA contains 9 files: 1. readme.txt - this file 2. PTA_SSA.R - R script with the function PTA_SSA() 3. PTA_SSA_Example.R - R example script 4-9. tensor_*.txt - text example files with different proxies (columns - time steps (1-st dim), rows - different sites (2-nd dim)) PTA_SSA: Function: PTA_SSA() - calculates Tensor Decomposition of 3-way data tensor (Principal Tensor Analysis merged with Singular Spectrum Analysis): 3-way data tensor is transformed to 4-way data tensor using delay time technique followed by Tensor Decomposition (PTAk package) and SSA reconstruction (Leibovici, 2010; Ghil et al., 2002). PTA_SSA_Example: Example on how to use the PTA_SSA() function. (6 sites, 6 proxies, see the article for details) Language: R Dependencies: PTAk package (Leibovici, 2010) Platform: Cross-Platform License: Open-Source S. Kotov, H. Paelike, 2018, Enhanced Principal Tensor Analysis as a tool for 3-way geological data reconstructions. MARUM, Bremen Uni., Leobener Str. 8, 28359 Bremen, Germany Email addresses: skotov@marum.de (S. Kotov), hpaelike@marum.de (H. Paelike) ************************************************************* Copyright 2017-2018 by Sergey Kotov (MARUM, Bremen Uni.) *************************************************************
DOI: 10.17632/vkvcfp2h6f.1
title: Data for: ROCK-MAGNETIC AND PALEOMAGNETIC STUDIES ON LATE-HOLOCENE SEDIMENTS FROM LAGUNA CHÁLTEL (PATAGONIA, ARGENTINA)

description: Data PSV-RPI, Laguna Cháltel
DOI: 10.5061/dryad.1m03145/1
title: DoC-feeling

description: Raw file containing the 692 measures
DOI: 10.5061/dryad.28n02s8/1
title: Michelangeli et al Behav. Ecol. Behavioural sydnrome vary among geographically distinct populations in a reptile _DATASET

description: This excel datasheet contains the behavioural metrics measured for each individual lizard for both trial 1 and trial 2 across all behavioural assays (non-directed activity, obstacle test, sociability test, predator-response test). The excel spreadsheet contains a sheet "Total" that has all of the behavioural metrics combined. There are also seperate sheets for each behavioural assays that contain the behavioural metrics for that assay only. Check the README file for a description of the column headings
DOI: 10.5061/dryad.35g4j2q/1
title: Horn measurements-all treatments

description: Measurements for horn size- body size allometries for all treatments.
DOI: 10.5061/dryad.35g4j2q/2
title: Aedeagus measurements- all treatments

description: Measurements for the aedeagus length- body size allometries for all treatments.
DOI: 10.5061/dryad.35g4j2q/3
title: qPCR data

description: qPCR data for larvae and pupae.
DOI: 10.5061/dryad.4h92834/1
title: GDP, Spending, Oil Price and Energy Consumption Data
DOI: 10.5061/dryad.4q3d25m/1
title: Amphibia_New_India_Dryad

description: Partition file describing GTRGAMMA model partitions from PartitionFinder2 for RAxML analysis.
DOI: 10.5061/dryad.4q3d25m/2
title: Amphibia_New_India_Dryad

description: PHYLIP file containing 15-gene, 4,063-taxon, 15,259bp alignment of DNA sequences.
DOI: 10.5061/dryad.4q3d25m/3
title: Amphibia_New_India_SHL_Dryad

description: NEWICK-format string containing tree file resulting from ML analysis of the alignment and model file.
DOI: 10.5061/dryad.53mp5ng/5
title: VCF file of red mangrove SNPs

description: This is a VCF file containing SNP data for 122 red mangrove individuals
DOI: 10.5061/dryad.53mp5ng/6
title: Supplement

description: This supplement contains three Supplemental Tables and three Supplemental Figures
DOI: 10.5061/dryad.53mp5ng/7
title: VCF file of white mangrove SNPs

description: This is a VCF file containing SNP data for 54 white mangrove individuals
DOI: 10.5061/dryad.53mp5ng/8
title: Ocean current layers

description: Zipped folder containing 24 .asc files with ocean current bearing (East, North) and velocity for the study region
DOI: 10.5061/dryad.68jc53n/1
title: Dryad_Demographics

description: This file contains participant characteristics and demographics (20  human participants)
DOI: 10.5061/dryad.68jc53n/2
title: Dryad_Muscle_Architecture

description: This file contains data for calculation of the physological cross sectional area
DOI: 10.5061/dryad.68jc53n/3
title: Dryad_EMG_Reliability

description: This file contains data of EMG RMS values measured during the  isometric plantarflexion tasks performed at 20% of MVC and normalized to that measured during maximal isometric plantarflexion. Data for both session 1 & 2 are reported.
DOI: 10.5061/dryad.68jc53n/4
title: Dryad_Torque

description: This file contains data measured during the maximal voluntray isometric plantarflexions.
DOI: 10.5061/dryad.68jc53n/5
title: Dryad_Muscle_Activation

description: This file contains data of EMG RMS values measured during the isometric plantarflexion tasks performed at 20% of MVC and during the ramp contraction from 10 to 70% of MVC. Data are normalized to that measured during maximal isometric plantarflexion
DOI: 10.5061/dryad.6pn119g/1
title: Specimens collected

description: Provides depth, location and museum registration numbers of specimens collected during our study
DOI: 10.5061/dryad.72d1v26/1
title: Warncke et al. Features of MODY 1 and 5. suppl. information

description: List of centers which contributed patients to this analysis.
DOI: 10.5061/dryad.72d1v26/2
title: Warncke et al. Features of MODY 1 and 5. suppl. table 1

description: Recalls and validation of disease-causing mutations.
DOI: 10.5061/dryad.72d1v26/3
title: Warncke et al. Features of MODY 1 and 5. suppl. table 2

description: Logistic regression analysis, given as odds ratio (OR) in favor of the respective MODY subtype vs. T1D/T2D for each variable at the most recent visit.
DOI: 10.5061/dryad.74tk6cr/3
title: Raw_data_english
DOI: 10.5061/dryad.74tk6cr/4
title: Primärdaten_Deutsch
DOI: 10.5061/dryad.79386ft/4
title: field_data

description: Directory contains three files, one for each of the field reciprocal transplant studies.
DOI: 10.5061/dryad.79386ft/5
title: population_locations

description: GPS coordinates for populations used in reciprocal transplant studies
DOI: 10.5061/dryad.79386ft/6
title: soil_data

description: Soil chemical analysis data
DOI: 10.5061/dryad.79386ft/7
title: common_garden

description: This directory contains two files - the survival data for the common garden experiment and the genotyping results for the RH F2 survivors
DOI: 10.5061/dryad.7j0c8dm/1
title: ALL

description: All sequence data analysed in this manuscript. Primers and adapters have been removed, sequences have been collapsed into haplotypes and singleton sequences have been removed. Sequences have been re-named to indicate species and individual bat from which the sample originated for exampe AP1 is Antrozous pallidus individual 1. To use this data please contact the corresponding author for additional details.
DOI: 10.5061/dryad.7jf48t0/1
title: BAM_mappedReads

description: BAM file corresponding to the reads of Location1 and Location2 samples of I. ventalloi mapping to the bacterial genome reference list.
DOI: 10.5061/dryad.7k2g187/1
title: Priadka_etal_2018_genotypes

description: Genotypes for 1221 boreal caribou at 9 microsatellite loci. Missing data is indicated by "-99". Coordinates for sampling locations have not been included because boreal caribou are listed as Threatened under Canada's Species At Risk Act.
DOI: 10.5061/dryad.7k2g187/2
title: Priadka_etal_2018_Landscape_rasters

description: Raster .asc files of landscape resistance models. Univariate models include resistance costs of 10, 50 and 100. Optimized models for Cluster 1 and Cluster 2 reflect the optimized resistance costs for roads and water bodies (land1), roads and forestry (land2), water bodies and forestry (land3) and roads, water bodies and forestry (land4). Raster cell size is 250m in planar projection.
DOI: 10.5061/dryad.888gm50/1
title: Database dump of games (1/8)

description: Postgres database dump. Gziped plain text, separated using "split" command in Linux. To rejoin the parts and recreate the gzip file, issue the following concatenate command at the command line: cat xaa xab xac xad xae xaf xag xah &gt; gamesdb.gz
DOI: 10.5061/dryad.888gm50/2
title: Database dump of games (2/8)

description: Postgres database dump. Gziped plain text, separated using "split" command in Linux. To rejoin the parts and recreate the gzip file, issue the following concatenate command at the command line: cat xaa xab xac xad xae xaf xag xah &gt; gamesdb.gz
DOI: 10.5061/dryad.888gm50/3
title: Database dump of games (3/8)

description: Postgres database dump. Gziped plain text, separated using "split" command in Linux. To rejoin the parts and recreate the gzip file, issue the following concatenate command at the command line: cat xaa xab xac xad xae xaf xag xah &gt; gamesdb.gz
DOI: 10.5061/dryad.888gm50/4
title: Database dump of games (4/8)

description: Postgres database dump. Gziped plain text, separated using "split" command in Linux. To rejoin the parts and recreate the gzip file, issue the following concatenate command at the command line: cat xaa xab xac xad xae xaf xag xah &gt; gamesdb.gz