cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.ns1rn8pqq
title: Gulf of Maine genotypes for 'Species identification based on a semi-diagnostic marker: evaluation of a simple conchological test for distinguishing blue mussels Mytilus edulis L. and M. trossulus Gould'

description: These are genotype calls for Gulf of Maine samples associated
 with the paper 'Species identification based on a
 semi-diagnostic marker: evaluation of a simple conchological test for
 distinguishing blue mussels Mytilus edulis L. and M. trossulus
 Gould'.
description: These are the multilocus snp genotypes for Gulf of Maine mussels
 in vcf and structure file formats; stacks library reference
 files Corresponding author: Sarah E Kingston
 kingston.sarah@gmail.com SNP data were generated using
 a genotype-by-sequencing genome reduction method (see Elshire et al, 2011
 doi.org/10.1371/journal.pone.0019379 and Kingston et al. 2018 DOI:
 10.1111/jeb.13224) and using the de novo alignment and SNP calling program
 STACKS (Catchen et al. 2011 and 2013 doi.org/10.1534/g3.111.000240 and
 DOI: 10.1111/mec.12354)
description: Missing data in structure format is represented by -9
 Missing data in vcf format is represented by .
 STACKS file format details can be found at https://catchenlab.life.illinois.edu/stacks/manual/#files Structure file data format detailed at https://web.stanford.edu/group/pritchardlab/software/structure-data_v.2.3.1.html
DOI: 10.5061/dryad.73n5tb2vs
title: Data from: How oscillating aerodynamic forces explain the timbre of the hummingbird's hum and other animals in flapping flight

description: The source of the hummingbird's distinctive hum is not fully
 understood, but there are clues to its origin in the acoustic nearfield.
 Hence we studied six freely hovering Anna’s hummingbirds, performing
 acoustic nearfield holography using a 2176 microphone array in vivo, while
 also directly measuring the 3D aerodynamic forces using a new aerodynamic
 force platform. We corroborate the acoustic measurements by developing a
 first-principles acoustic model that integrates the aerodynamic forces
 with wing kinematics, which shows how the timbre of the hummingbird’s hum
 arises from the oscillating lift and drag forces on each wing. Comparing
 birds and insects, we find that the characteristic humming timbre and
 radiated power of their flapping wings originates from the higher
 harmonics in the aerodynamic forces that support their bodyweight. Our
 model analysis across insects and birds shows that allometric deviation
 makes larger birds quieter and elongated flies louder, while also
 clarifying complex bioacoustic behavior.
DOI: 10.5061/dryad.k3j9kd55j
title: Tracking data (acoustic telemetry) of parrotfishes in the Red Sea

description: Herbivorous fishes such as parrotfishes (Scaridae) play a crucial role in
 maintaining reef health by grazing macroalgae that would otherwise
 out-compete corals for space. Full appreciation of this contribution,
 however, depends on understanding the spatiotemporal patterns of
 parrotfish habitat utilization. Studies on spatial dynamics of parrotfish
 have been limited to short temporal spans (days to weeks) or coarse
 spatial resolution (kilometers). In this study, we used an underwater
 acoustic tracking system to monitor the movement and activity of 23
 individuals, from three parrotfish species, for up to 520 days. We found
 that parrotfish exhibited surprisingly high degrees of sleeping and
 foraging site fidelity, between which they commuted daily. Consequently,
 diurnal activity was restricted throughout the entire study duration, to
 the same confined areas (7,155 ± 800 m2, mean ± SE). These high activity
 areas should be compared to the total home range area of 51,990 ± 7,174
 m2. These results suggest that the ecological impact of individual
 parrotfish grazing is far more restricted than expected from their overall
 home range. The extremely constrained foraging areas raise concerns of the
 capacity of parrotfish to mitigate phase shifts in coral reefs by
 spatially adjusting their foraging behaviors.  From a broader
 perspective, this study highlights the importance of looking beyond
 overall home range, to examine spatiotemporal patterns of specific
 activities.
description: Acoustic telemetry
DOI: 10.6086/d13x22
title: Optical and NMR spectra along with atomic coordinates of the title compounds for: Deciphering the Enigma of Unusual Fluorescence in Weakly Coupled Bis-nitro-pyrrolo[3,2-b]pyrroles

description: Adding nitro groups to aromatic compounds usually quenches their
 fluorescence via inter-system crossing (ISC) or internal conversion (IC).
 The electronic coupling of the nitro groups with the dyes should be strong
 enough to ensure the electron-withdrawing benefits, and weak enough to
 prevent fluorescence quenching. Here, we demonstrate how such electronic
 coupling affects the photophysics of acceptor-donor-acceptor fluorescent
 dyes, with nitrophenyl acceptors and a pyrrolo[3,2-b]pyrrole donor. The
 position of the nitro groups and the donor-acceptor distance strongly
 affect the fluorescence properties of the
 bis-nitrotetraphenylpyrrolopyrroles. Concurrently, increasing solvent
 polarity quenches the emission that recovers upon solidifying the media.
 Intramolecular charge transfer (CT) and molecular dynamics, therefore,
 govern the fluorescence of these nitro-aromatics. While balanced
 donor-acceptor coupling ensures fast radiative deactivation and slow ISC
 essential for high fluorescence quantum yields, vibronic borrowing
 accounts for medium dependent IC via back CT. These mechanistic paradigms
 set important design principles for molecular photonics and electronics.
description: Emission decays: The time "t, ns" is obtained from the
 conversion of channels to time in each channel. Where t,ns  = chanels * -
 7.050943e-03 + 53.467.  Transient absorption: Data
 reflects the scattered light and background spectra subtracted as well as
 chirp correcttion.
DOI: 10.15468/dl.ey9bxh
title: Occurrence Download

description: A dataset containing 819 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gorilla beringei beringei"
 ]
}

 The dataset includes 819 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002589-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.dncjsxkxd
title: Male survival advantage on the Baja California Penninsula

description: A consistent finding from contemporary Western societies is that women
 outlive men. However, what is unclear is whether sex differences in
 survival are constant across varying socio-ecological conditions. We test
 the universality of the female survival advantage with mortality data from
 a 19th century population in the Baja California peninsula of Mexico. When
 examined simply, we find evidence for a male-biased survival advantage.
 However, results from Cox regression clearly show the importance of age
 intervals for variable survival patterns by sex. Our key findings are that
 males: 1) experience significantly lower mortality risk than females
 during the ages 15-30 (RR = 0.69), 2) are at a significantly increased
 risk of dying in the 61+ category (RR = 1.30), and 3) do not experience
 significantly different mortality risk at any other age interval (0-14,
 31-45, 46-60). We interpret our results to stem from differing intrinsic
 and extrinsic risk-factors for sex-biased mortality across age intervals,
 highlighting the relevance of a lifecourse approach to the study of
 survival advantage. Ultimately, our results make clear the need to more
 broadly consider variability in mortality risk factors across time and
 place to allow for a clearer understanding of human survival differences.
DOI: 10.82294/dvnibjruz
title: Datos consolidados de eje medular. Territorio: Cali. Eje: Agenciamiento. Sector: Cultura, Educación, Total. Año: 2025

description: Datos consolidados de las observaciones semiestructuradas sobre el eje medular de agenciamiento, realizadas en la ciudad de Cali. Este dataset reúne los archivos correspondientes a los educadores artísticos del sector Educación y del sector Cultura, así como un archivo consolidado que integra la información de ambos sectores.
DOI: 10.5061/dryad.7sqv9s4r0
title: Confronting assumptions about prey selection by lunge-feeding whales using a process-based model

description: The relative energetic benefits of foraging on one type of prey rather
 than another are not easily measured, particularly for large free-ranging
 predators. Nonetheless, assumptions about preferred and alternative prey
 are frequently made when predicting how a predator may impact its
 environment, adapt to environmental change, or interact with human
 activities. We developed and implemented a process-based model to
 investigate the potential energetic benefit (PEB) of in situ foraging
 opportunities in rorqual whales. The model integrates and evaluates the
 energetic importance of measured prey patch characteristics (prey
 distribution, energy content and predator avoidance) and predator
 characteristics (morphometrics, foraging tactics and feeding
 rates).  We applied the model to test the assumption that
 hatchery-released juvenile salmon are an “easy meal” for humpback whales
 compared to more common prey, herring and krill. In eleven out of the
 thirteen foraging situations considered, whales were found to be feeding
 in a manner where net energy gain was greater than the energetic costs of
 non-foraging swimming.  Humpback whale PEB for hatchery-released
 juvenile salmon fell within the range of the PEB for krill and herring but
 varied by species, from relatively high PEB for chum salmon to relatively
 low for coho salmon. Our model provides behavioral insight as well,
 indicating that shallow feeding may be more important for reducing energy
 expenditure through slower lunge speeds than for increasing prey
 capture.  The model also provides a means of identifying prey
 patch characteristics, with prey aggregation playing the largest role in
 determining PEB despite being a poor overall proxy for PEB, supporting the
 use of the complex model framework. Modeling approaches are especially
 valuable where they can use reasonable assumptions to substitute for lack
 of reliable observations, thereby integrating a range of interacting
 factors into a single framework.  Additionally, because
 process-based models can make predictions outside the range of previously
 observed conditions, they will be increasingly useful in a changing
 climate.
description: Methods are described in a manuscript in review
DOI: 10.15468/dl.d44e9u
title: Occurrence Download

description: A dataset containing 1570 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coregonus kiyi",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1570 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002591-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7280/d1jx0k
title: Data from: How atmospheric chemistry and transport drive surface variability of N2O and CFC-11

description: Figure and table scripts, processed data from: NOAA observations, MLS
 measurements, GMI, UCI, and LMDz5 CTMs. This dataset
 includes processed numerical output from N2O tracer experiments
 that quantify the stratospheric signal of N2O, driven by atmospheric
 chemistry and transport, at Earth’s surface in observations and 3 CTMs.
 Nitrous oxide (N2O) is a long-lived greenhouse gas that affects
 atmospheric chemistry and climate. In this work we use satellite
 measurements of N2O, ozone (O3), and temperature from the Aura Microwave
 Limb Sounder (MLS) instrument to calculate stratospheric loss of N2O, and
 thus its atmospheric lifetime. Using three chemistry transport models
 (CTMs) simulating the Aura period 2005-2017, we verify the stratospheric
 sink using MLS data and follow that loss signal down to the surface and
 compare with surface observations. Stratospheric loss has a strong
 seasonal cycle and is further modulated by the Quasi-Biennial Oscillation
 (QBO); these cycles are seen equally in both observations and the models.
  When filtered for interannual variability, the modeled surface
 signal is QBO-caused, and it reproduces the observed pattern, highlighting
 the potential role of the QBO in tropospheric chemistry and composition,
 as well as in model evaluation.  The observed annual surface
 signal in the northern hemisphere (NH) matches well with the models run
 without emissions, indicating the annual cycle is driven mostly by
 stratosphere-troposphere exchange (STE) flux of N2O-depleted air and not
 surface N2O emissions.  In the southern hemisphere (SH), all
 three models disagree and thus provide no guidance, except for indicating
 that modeling STE in the SH remains a major model uncertainty. 
 Parallel model simulations of CFCl3, which has greater stratospheric loss
 that N2O and possibly surreptitious emissions, show that its interannual
 variations parallel those of N2O, and thus the observed N2O variability
 can identify the stratospheric component of the observed CFCl3
 variability.
DOI: 10.5061/dryad.pk0p2ngkw
title: Morphology and locomotor performance of cane toads, Rhinella marina

description: As is common in biological invasions, the rate at which cane toads
 (Rhinella marina) have spread across tropical Australia has accelerated
 through time. Individuals at the invasion-front travel further than
 range-core conspecifics, and exhibit distinctive morphologies that may
 facilitate rapid dispersal. However, the links between these morphological
 changes and locomotor performance have not been clearly documented. We
 used raceway trials and high-speed videography to document locomotor
 traits (e.g. hop distances, heights, velocities, and angles of take-off
 and landing) of toads from range-core and invasion-front populations.
 Locomotor performance varied geographically, and this variation in
 performance was linked to morphological features that have evolved during
 the toads’ Australian invasion. Geographic variation in morphology and
 locomotor ability was evident not only in wild-caught animals, but also in
 individuals that had been raised under standardized conditions in
 captivity. Our data thus support the hypothesis that the cane toad’s
 invasion across Australia has generated rapid evolutionary shifts in
 dispersal-relevant performance traits, and that these differences in
 performance are linked to concurrent shifts in morphological traits.
description: Measurements of morphology of wild-caught cane toads and of
 captive-raised offspring (mm,g). Measurements of
 attributes of jumps of those toads (angles of take-off and landing,
 velocity, distances, heights) - units are degrees, cm/s, cm
DOI: 10.5061/dryad.n5tb2rbtc
title: Python Script used in: Evolution of nuptial gifts and its coevolutionary dynamics with male-like persistence traits of females for multiple mating

description: Many male animals donate nutritive materials during courtship or mating to
 their female mates. Donation of large-sized gifts, though costly to
 prepare, can result in increased sperm transfer during mating and delayed
 remating of the females, resulting in a higher paternity. Nuptial gifting
 sometimes causes severe female-female competition for obtaining gifts
 (i.e., sex-role reversal in mate competition) and female polyandry,
 changing the intensity of sperm competition and the resultant paternity
 gains. We built a theoretical model to analyze such coevolutionary
 feedbacks between nuptial gift size (male trait) and propensity for
 multiple mating (female trait). Our genetically explicit, individual-based
 computer simulations demonstrate that a positive correlation between
 donated gift size and the resultant paternity gain is a requisite for the
 co-occurrence of large-sized gifts and females’ competitive multiple
 mating for the gifts. When gift donation imposes monandry, exaggeration of
 nuptial gift size also occurs under the assumption that the last male
 monopolizes paternity, although it reduces mating opportunities, also
 occurs under the assumption that the last male monopolizes paternity. We
 also analyzed the causes and consequences of the evolution of a female
 persistence trait in trading of nuptial gifts, that is, double receptacles
 for nuptial gifts known to occur in an insect group with a “female penis”
 (Neotrogla spp.).
DOI: 10.5061/dryad.zgmsbcc8r
title: Rapid synthesis and characterization of silver-loaded graphene oxide nanomaterials and their antibacterial applications

description: All original data used in figures and tables of the manuscript are available in the dataset, which includes the X-ray diffraction, Fourier transform infrared spectroscopy, X-ray photoelectron spectroscopy, transmission electron microscopy, scanning electron microscopy with energy dispersion spectroscopy, zeta potential analysis and antibacterial properties measurement. Ultrasound was practically used in large-scale production of water-soluble silver/graphene oxide (Ag/GO) by reducing the silver ions (Ag+) attached to graphene oxide into silver nanoparticles. The infrared and X-ray photoelectron spectra indicated that there is a strong interaction between Ag and GO. The morphology analysis showed that AgNPs having a monodisperse size was well dispersed on the surface of the GO nanosheet. The zeta potential analysis showed that the Ag/GO nanomaterials suspension has high stability. In addition, the Ag/GO nanomaterials exhibited an effective antibacterial activity against Escherichia coli and Staphylococcus aureus.
description: These data such
 as UV-vis Absorption spectroscopy, Fourier transform
 infrared spectroscopy, x-ray diffraction pattern and X-ray photoelectron
 spectra are derived directly from the test instruments and equipment. They
 can be processed directly to produce graphs.  The surface morphologies were
 observed using scanning electron microscope with energy dispersive
 spectroscopy. To observe the morphology more clearly, there was no gold
 spray. The high-resolution transmission electron microscopy (HRTEM) images
 were taken by a JEM-2100 model instrument operated at an accelerating
 voltage of 100kV. Samples for HRTEM imaging were prepared by placing a
 drop of the sample solution in a carbon-coated copper grid and dried in
 air. The zeta potential
 of the particles in the Ag/GO solution was detected by a JS94K2 type
 microelectrophoresis apparatus. The antibacterial activity of Ag/GO
 nanomaterials against Gram-negative bacteria E. coli ATCC 25922 and
 Gram-positive bacteria S. aureus ATCC 6538 was studied by two methods:
 plate method and hole punching method. The cell viability was calculated
 by the following formula: Cell viability (100%) = ODt/ODn × 100%, where
 ODt is the absorbance of the test, and ODn is the absorbance of negative
 control.
DOI: 10.15468/dl.h6c67q
title: Occurrence Download

description: A dataset containing 37179 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belgium",
 "TaxonKey is one of (Crassula helmsii, Lithobates catesbeianus, Misgurnus mohoity, Myriophyllum aquaticum, Procambarus clarkii, Procambarus virginalis, Xenopus laevis, Zizania latifolia)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 37179 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002588-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.nvx0k6dqq
title: Plasticity in leakiness

description: In dioecious plants, males and females frequently show ‘leaky’ sex
 expression, with individuals occasionally producing flowers of the
 opposite sex. This leaky sex expression may have enabled the colonization
 of oceanic islands by dioecious plant species, and it is likely to
 represent the sort of variation upon which selection acts to bring about
 evolutionary transitions from dioecy to hermaphroditism. Although
 leakiness is commonly reported for dioecious species, it is not known
 whether it has plastic component. The question is interesting because
 males or females with an ability to enhance their leakiness plastically in
 the absence of mates would have an advantage of being able to produce
 progeny by self-fertilization. Here, we demonstrate that leaky sex
 expression in the wind-pollinated dioecious herb Mercurialis
 annua is plastically responsive to its mating context. We
 compared experimental populations of females growing either with or
 without males. Females growing in the absence of males were leakier in
 their sex expression than controls growing with males, producing more than
 twice as many male flowers. Our results thus provide a striking instance
 of plasticity in the reproductive behavior of plants that is likely
 adaptive. We consider how females might sense their mating environment as
 a function of pollen availability, and we discuss possible constraints on
 the evolution of plasticity in sex expression when the environmental
 signals that individuals receive are unreliable. 
description: See text of paper. 
description: The file 'Plasticity-data.txt' contains data collected
 on females grown in populations (plots) with our without males. Each row
 corresponds to a different female. 
 treatment: Cntr=treatment in which females were grown with
 males; Sel=treatment in which females were grown without males
 plot: there were three replicate plots for each of the two
 treatment levels pot: the label number for the pot in
 which the target female was grown nb_male_flowers: the
 number of male flowers recorded per plant. These were converted to biomass
 by multiplying by 0.0002046914 g per flower.  seedw_g:
 the biomass of seeds and fruits, in g  drymass_g: the
 dry biomass of the above-ground parts of the plant, in g
DOI: 10.5061/dryad.8sf7m0ckg
title: Data from: Regional response of grassland productivity to changing environment conditions influenced by limiting factors

description: Regional differences and regulatory mechanisms of vegetation productivity
 response to changing environmental conditions constitute a core issue in
 macroecological researches. To verify the main limiting factors of
 different macrosystems [temperature-limited Tibetan Plateau (TP),
 precipitation-limited Mongolian Plateau (MP), and nutrient-limited Loess
 Plateau (LP)], we conducted a comparative survey of the east-west
 grassland transects on the three plateaus and explored the factors
 limiting regional productivity and their underlying mechanisms. The
 results showed that aboveground net primary productivity (ANPP) of LP
 (109.10 ± 16.76 g m−2 yr−1) was significantly higher than that of MP
 (66.71 ± 11.11 g m−2 yr−1) and TP (57.02 ± 10.59 g m−2 yr−1). The response
 rate of ANPP with environmental changes was different among different
 plateaus, being closely related to the main limiting factors. On MP, this
 was precipitation, on LP it was temperature and nutrients, and on TP, it
 was non-specific, reflecting restriction by the extremely low temperature.
 After autocorrelation screening of environmental factors, different
 regions exhibited different productivity response mechanisms. MP was
 mainly influenced by temperature and precipitation, LP was influenced by
 temperature and nutrient, and TP was influenced by nutrient, reflecting
 the modifying effect of the main limiting factors. The effect of each
 regional environment on ANPP was 72.56% on average and only 27.18% after
 simple regional integration. The regional model could optimize the
 simulation error of the integrated model, and the relative deviations in
 MP, LP, and TP were reduced by 31.76%, 17.22%, and 2.23%, respectively.
 These findings indicate that the grasslands on the three plateaus may have
 different or even the opposite mechanisms to control productivity.
description: Field investigation in 2018