cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.14278/rodare.2255
title: Tinto: Multisensor Benchmark for 3D Hyperspectral Point Cloud Segmentation in the Geosciences

description: The increasing use of deep learning techniques has reduced interpretation time and, ideally, reduced interpreter bias by automatically deriving geological maps from digital outcrop models. However, accurate validation of these automated mapping approaches is a significant challenge due to the subjective nature of geological mapping and the difficulty in collecting quantitative validation data. Additionally, many state-of-the-art deep learning methods are limited to 2D image data, which is insufficient for 3D digital outcrops, such as hyperclouds. To address these challenges, we present Tinto, a multi-sensor benchmark digital outcrop dataset designed to facilitate the development and validation of deep learning approaches for geological mapping, especially for non-structured 3D data like point clouds. Tinto comprises two complementary sets: 1) a real digital outcrop model from Corta Atalaya (Spain), with spectral attributes and ground-truth data, and 2) a synthetic twin that uses latent features in the original datasets to reconstruct realistic spectral data (including sensor noise and processing artifacts) from the ground-truth. The point cloud is dense and contains 3,242,964 labeled points. We used these datasets to explore the abilities of different deep learning approaches for automated geological mapping. By making Tinto publicly available, we hope to foster the development and adaptation of new deep learning tools for 3D applications in Earth sciences.
description: This research received funding from the Initiative and Networking Fund (INF) of the Hermann von Helmholtz Association of German Research Centres in the framework of the Helmholtz Imaging Platform under grant agreement No ZT-I-PF-4-021.
DOI: 10.25375/uct.24183843
title: Investigation of the effect of hydrocarbon spillages and their interaction with alteration minerals on the flotation of UG2 PGE ore

description: Raw data from the MSc thesis 'Investigation of the effect of hydrocarbon spillages and their interaction with alteration minerals on the flotation of UG2 PGE ore' by Thendo A. Tshinavhe, 2023. Centre for Minerals Research, Department of Chemical Engineering, University of Cape Town.
DOI: 10.25375/uct.24183843.v1
title: Investigation of the effect of hydrocarbon spillages and their interaction with alteration minerals on the flotation of UG2 PGE ore

description: Raw data from the MSc thesis 'Investigation of the effect of hydrocarbon spillages and their interaction with alteration minerals on the flotation of UG2 PGE ore' by Thendo A. Tshinavhe, 2023. Centre for Minerals Research, Department of Chemical Engineering, University of Cape Town.
DOI: 10.6084/m9.figshare.24197271.v1
title: Replication of dynamic equations and eigenvalue computation procedures

description: The global cold chain logistics market is witnessing a significant upswing, driven by the rising demand for perishable food products and increasing shipment volumes worldwide. Technological advancements are leading to a more intelligent and digitally enabled cold chain logistics system. However, the high loss rate of fresh agricultural products in China poses a significant threat to the country's food security. Therefore, it is imperative to explore innovative solutions, such as blockchain, to address the challenges of traditional cold chain logistics. In this paper, inspired by the prospect theory and evolutionary game theory, we propose an evolutionary game model to analyze the behavioral strategies of the tripartite of n-level cold chain participants, consumers, and government. Using MATLAB software, the numerical simulation of the game path of this tripartite theory is conducted, and the influence of variable parameters on the evolutionary process and outcomes of the system is analyzed. The results the following: (1) The development of an effective cold chain supply chain system can be divided into three stages, and blockchain technology plays a pivotal role in creating a seamless cold chain environment. The cost of blockchain adoption, government rewards, as well as penalties can significantly influence the behavioral choices of the three stakeholders. (2) The behavior of individual cold chain participants has a strong negative externality, which can impact the behavior of others. We also find that the larger the scale of the cold chain, the lower the probability of default by the participants. (3) The government's adoption of blockchain technology and the implementation of effective incentive policies can foster the successful development of the cold chain blockchain infrastructure. Our research contributes to the theoretical understanding of cold chain logistics decision making and policy creation for the tripartite stakeholders, including cold chain participants, consumers, and government. Our findings can serve as a valuable reference for scientific decision making and policy formulation to encourage the development of a robust cold chain supply chain system.
DOI: 10.5517/cct5bw5
title: CCDC 749917: Experimental Crystal Structure Determination

description: Related Article: Y.J.Cai, L.Shi, H.L.Zhu|2010|Koord.Khim.|36|501|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.8370667
title: Environmental DNA captures diurnal fluctuations of surface eukaryotes on a tropical coral reef

description: Data and code for Dowell et al (2023) submission to Environmental DNA.
DOI: 10.5281/zenodo.8370666
title: Environmental DNA captures diurnal fluctuations of surface eukaryotes on a tropical coral reef

description: Data and code for Dowell et al (2023) submission to Environmental DNA.
DOI: 10.5066/f7fx78cv
title: Food Web Data, Colorado River Corridor, Grand Canyon, Arizona, 2006

description: These data were compiled for a manuscript that examines the riverine food-web structure of the Colorado River below Glen Canyon dam to its confluence with Lake Mead. Tissue from primary producers (vascular plants and algae) and consumers (aquatic invertebrates and fish) were collected before and after monsoon floods in 2006 along the 388 kilometer segment of the Colorado River in the Southwest US. Tissue samples were dried, ground, and analyzed for δ13C, δ15N, and δ2H stable isotope signatures and percent carbon and nitrogen. Analysis of these data focused on determining the proportion of terrestrial (allochthonous) vs. aquatic (autochthonous) organic matter sources at the base of the food web, trophic diversity of primary and secondary consumers, and food-chain in response to pulsed flows resulting from monsoon floods that rapidly increase streamflow and flush terrestrial detritus into the river. Sabo, J.L., Caron, M., Doucett, R., Dibble, K.L., Ruhi, A., Marks, J.C., Hungate, B.A. and Kennedy, T.A., 2018, Pulsed flows, tributary inputs, and food web structure in a highly regulated river: Journal of Applied Ecology (online), doi:10.1111/1365-2664.13109.
DOI: 10.6073/pasta/fae8e94a866b71fad5e9122136b5b95e
title: Visual survey of insect communities on Iva frutescens in summer 2013 and 2014 on Sapelo Island, Georgia

description: Visual surveys were conducted in summer 2013 and 2014 to record the insect fauna that occurred on patches of Iva frutescens. Forty-four patches of Iva frutescens at three locations on Sapelo Island, Georgia, were marked for repetitive surveys. Thirty-eight of these patches were sampled in 2014. The patches were visually surveyed every three days from May 29 - June 15, 2013, and from June 1 - July 29, 2014, and the taxon and abundance of insects were recorded. This submission contains three data tables: 1. Insect fauna of Iva patches in 2013. This data set includes observations of 44 patches on 6 sampling dates, and includes Armases crab data. 2. Insect fauna of Iva patches in 2014. This data set includes observations of 38 patches on 20 sampling dates. 3. Structure of Iva patches on Sapelo Island in 2013. This data set contains the dimensions (Length, Width, Height) and surrounding environments of the Iva patches that were surveyed in 2013. The GPS locations of the patches were measured in 2014.
DOI: 10.57841/casdc.0002551
title: 两种激光熔覆涂层对轮轨材料磨损与损伤性能的影响
DOI: 10.5281/zenodo.7962840
title: the data for WPV model for budburst

description: The budburst data in five populations for three species
DOI: 10.5519/0065209
title: Sex biases in natural history collections of birds and mammals.

description: Data from paper: **Sex biases in natural history collections of birds and mammals**. [link to paper](http://dx.doi.org/10.1098/rspb.2019.2025). &gt; Natalie Cooper, Alexander L. Bond, Joshua L. Davis, Roberto Portela Miguez, Louise Tomsett, and Kristofer M. Helgen. 2019. Sex biases in bird and mammal natural history collections. Proceedings of the Royal Society Series B: Biological Sciences. 286, 20192025. DOI:10.1098/rspb.2019.2025. The analyses require the two tidied datasets `all-specimen-data.csv` (unzipped) and `all-extra-data.csv`. Raw data sources used to build these are listed in the metadata or provided in `ornamentation.csv`. More details can be found at https://github.com/nhcooper123/sex-bias-museums.
DOI: 10.6084/m9.figshare.22557337
title: Supplementary material for "Resistance exercise counteracts the impact of androgen deprivation therapy on muscle characteristics in cancer patients"

description: Table 1: Habitual dietary intake and physical activity level at baseline and following either 20 weeks of usual care (Control) or resistance exercise training (Exercise) in prostate cancer patients on androgen deprivation therapy. <br> Table 2: Type I and type II muscle fiber characteristics at baseline and following 20 weeks of androgen deprivation therapy (ADT only) or androgen deprivation therapy combined with chemotherapy (ADT + Chemotherapy) in prostate cancer patients
DOI: 10.6084/m9.figshare.3398392.v1
title: Mussel size spectrum

description: Size spectrum data from one tile in each mesocosm, from preserved tiles. Mussels were removed from tiles and photographed, analysis in Image J
DOI: 10.5281/zenodo.1173341
title: Taxon Sampling And Inferred Community Phylogenies: R Replication Code And Data.

description: 1 ) Code for simulating community phylogenies:

community_simulations_creation.R

[taxon].gene

[taxon].phy

[taxon].RAxML_bestTree.tre

[taxon].Simulate.A.Community.pl

[taxon].Simulate.B.Community.pl

[taxon].Simulate.C.Community.pl

[taxon].Simulate.D.Community.pl

 

2) R code for creating and comparing phylogenetic diversity metrics:

simulated_metric_calculation_and_comparison.R

empirical_metric_calculation_and_comparison.R

 

3) R code and data for statistical analyses:

simulated_data_analysis.R

empirical_data_analysis.R

simulated_interval_individual_lme_data.csv

simulated_summary_interval_individual_lme_data.csv

empirical_interval_individual_lme_data.csv

empirical_summary_interval_lme_data.csv
DOI: 10.5281/zenodo.8379081
title: FL-Battery-RUL-dataset

description: Dataset of FL-Battery-RUL.
DOI: 10.5281/zenodo.8379080
title: FL-Battery-RUL-dataset

description: Dataset of FL-Battery-RUL.
DOI: 10.6084/m9.figshare.24197565
title: MCMC output for Bottleneck scenario

description: MCMC output for the model. The .zip file contain the output for the Bottleneck scenario under the different covaraites treatmentNo covariatesSamples at 0.80 observation probabilityNo transformationSamples at 0.80, 0.60 and 0.40 observation probabilityTransformationSamples at 0.80, 0.60 and 0.40 observation probabilityEach sample scheme contain 50 replicates and 3 MCMC chains each.
DOI: 10.6084/m9.figshare.24197565.v1
title: MCMC output for Bottleneck scenario

description: MCMC output for the model. The .zip file contain the output for the Bottleneck scenario under the different covaraites treatmentNo covariatesSamples at 0.80 observation probabilityNo transformationSamples at 0.80, 0.60 and 0.40 observation probabilityTransformationSamples at 0.80, 0.60 and 0.40 observation probabilityEach sample scheme contain 50 replicates and 3 MCMC chains each.
DOI: 10.5281/zenodo.8379057
title: Evaluation and optimisation of the soil carbon turnover routine in the MONICA model (version 3.3.1) - BDF data

description: Zip file consisting of the long-term monitoring sites data (BDF) used in the manuscript "Evaluation and optimisation of the soil carbon turnover routine in the MONICA model".
DOI: 10.5281/zenodo.8379056
title: Evaluation and optimisation of the soil carbon turnover routine in the MONICA model (version 3.3.1) - BDF data

description: Zip file consisting of the long-term monitoring sites data (BDF) used in the manuscript "Evaluation and optimisation of the soil carbon turnover routine in the MONICA model".
DOI: 10.6084/m9.figshare.23736033
title: Sharing codes and output files for the article entitled "Attribution of Lake Surface Water Temperature Change in Large Lakes Across China Over Past Four Decades"

description: This file contains the monthly simulated surface water temperature across large lakes in China, along with the corresponding codes for data processing.
DOI: 10.6084/m9.figshare.23736033.v1
title: Sharing codes and data for the article entitled "Attribution of Lake Surface Water Temperature Change in Large Lakes Across China Over Past Four Decades"

description: This file contains the simulated surface water temperature across large lakes in China, along with the corresponding codes for data processing.
DOI: 10.6084/m9.figshare.21710623
title: The role of maintenance therapy in the treatment of advanced urothelial cancer: a comprehensive systematic review and network meta-analysis

description: Concerns increase with maintenance therapy for advanced urothelial cancer (aUC). We perform a comprehensive network meta-analysis (NMA) to investigate the efficacy and toxicities of maintenance therapy in aUC patients. Trials assessing maintenance treatment with either a continuous or a switch strategy for aUC were identified. The primary outcome was overall survival (OS), and secondary outcome was progression-free survival (PFS) and toxicities. Nine articles reporting eight trials were included. The pooled hazard ratio demonstrated that maintenance therapy significantly improved OS giving HR 0.83 (95%CI: 0.74–0.93, P = 0.0013) and PFS with HR of 0.78 (95%CI: 0.62–0.99, P = 0.05), but increased the risk of developing severe adverse events and treated-related discontinues (P &lt; 0.05). Sub-group analysis indicated that ‘switch’ ICI (immune checkpoint inhibitor) maintenance therapy significantly improved OS and PFS when compared to best support care (BSC) (P &lt; 0.05). NMA showed that chemotherapy followed by ‘switch’ maintenance with ICI significantly improved OS (HR 0.70, 95%CI: 0.57–0.87) when compared to BSC. ‘Continuous’ maintenance with ICI alone had a tendency to improve OS (HR 0.85, 95%CI: 0.71–1.01), and TA (HR0.93, 95%CI: 0.58–1.50) and vinflunine (HR 0.74, 95%CI: 0.44–1.24) was no significantly associated with a lower likelihood of disease death. Based on the analysis of the treatment ranking, ‘switch’ maintenance with ICI appeared as the best treatment approach. Our pooled results confirm that maintenance therapy yields a significant survival advantage for aUC patients. NMA indicates that switch maintenance with ICI is the optimum maintenance treatment for aUC and reduces mortality by about a third.
DOI: 10.6084/m9.figshare.21710623.v1
title: The role of maintenance therapy in the treatment of advanced urothelial cancer: a comprehensive systematic review and network meta-analysis

description: Concerns increase with maintenance therapy for advanced urothelial cancer (aUC). We perform a comprehensive network meta-analysis (NMA) to investigate the efficacy and toxicities of maintenance therapy in aUC patients. Trials assessing maintenance treatment with either a continuous or a switch strategy for aUC were identified. The primary outcome was overall survival (OS), and secondary outcome was progression-free survival (PFS) and toxicities. Nine articles reporting eight trials were included. The pooled hazard ratio demonstrated that maintenance therapy significantly improved OS giving HR 0.83 (95%CI: 0.74–0.93, P = 0.0013) and PFS with HR of 0.78 (95%CI: 0.62–0.99, P = 0.05), but increased the risk of developing severe adverse events and treated-related discontinues (P &lt; 0.05). Sub-group analysis indicated that ‘switch’ ICI (immune checkpoint inhibitor) maintenance therapy significantly improved OS and PFS when compared to best support care (BSC) (P &lt; 0.05). NMA showed that chemotherapy followed by ‘switch’ maintenance with ICI significantly improved OS (HR 0.70, 95%CI: 0.57–0.87) when compared to BSC. ‘Continuous’ maintenance with ICI alone had a tendency to improve OS (HR 0.85, 95%CI: 0.71–1.01), and TA (HR0.93, 95%CI: 0.58–1.50) and vinflunine (HR 0.74, 95%CI: 0.44–1.24) was no significantly associated with a lower likelihood of disease death. Based on the analysis of the treatment ranking, ‘switch’ maintenance with ICI appeared as the best treatment approach. Our pooled results confirm that maintenance therapy yields a significant survival advantage for aUC patients. NMA indicates that switch maintenance with ICI is the optimum maintenance treatment for aUC and reduces mortality by about a third.
DOI: 10.6084/m9.figshare.21756235
title: Lorlatinib beyond progression plus platinum/pemetrexed for ALK-positive non-small cell lung cancer patients: report of two cases

description: Lorlatinib is an active treatment for advanced anaplastic lymphoma kinase (ALK)-positive non-small cell lung cancer (NSCLC) pretreated with ALK-tyrosine kinase inhibitors (-TKIs). However, there is paucity of data on the activity of platinum/pemetrexed chemotherapy administered at the time of progression on lorlatinib. In addition, it is uncertain whether continuation of lorlatinib beyond progression (LBP) would provide any additional clinical benefit. Here, we describe two cases experiencing an exceptional response to platinum/pemetrexed chemotherapy plus LBP and make an attempt to identify which patients’ characteristics and biologic profiles of the tumor could predict benefit from such an approach. In this report, presence of controlled brain metastases, rapidly progressing extracranial disease, and presence of ALK-dependent mechanisms of resistance were associated with benefit from platinum/pemetrexed chemotherapy plus lorlatinib beyond progression.
DOI: 10.6084/m9.figshare.21756235.v1
title: Lorlatinib beyond progression plus platinum/pemetrexed for ALK-positive non-small cell lung cancer patients: report of two cases

description: Lorlatinib is an active treatment for advanced anaplastic lymphoma kinase (ALK)-positive non-small cell lung cancer (NSCLC) pretreated with ALK-tyrosine kinase inhibitors (-TKIs). However, there is paucity of data on the activity of platinum/pemetrexed chemotherapy administered at the time of progression on lorlatinib. In addition, it is uncertain whether continuation of lorlatinib beyond progression (LBP) would provide any additional clinical benefit. Here, we describe two cases experiencing an exceptional response to platinum/pemetrexed chemotherapy plus LBP and make an attempt to identify which patients’ characteristics and biologic profiles of the tumor could predict benefit from such an approach. In this report, presence of controlled brain metastases, rapidly progressing extracranial disease, and presence of ALK-dependent mechanisms of resistance were associated with benefit from platinum/pemetrexed chemotherapy plus lorlatinib beyond progression.
DOI: 10.17632/8b29bwjm84.1
title: Mangrove Decomposition - A Review of k Values

description: We compiled a dataset of 480 decomposition rates, including species, litter fraction, latitude, and relevant biophysical data. See Simpson et al. XXXX for methods.
DOI: 10.6084/m9.figshare.23822535
title: Different impacts of diet composition on the stoichiometric traits of two freshwater species

description: Datasets and R scripts associated to the article entitled "Different impacts of diet composition on the stoichiometric traits of two freshwater species" (Accepted in Aquatic Ecology)See Metadata file
DOI: 10.20351/29sg20230814
title: BOCATS-2-2023_LEG2 Cruise, RV Sarmiento de Gamboa

description: Oceanographic data acquired during the BOCATS-2-2023_LEG2 Cruise (29SG20230814) on board the Research Vessel Sarmiento de Gamboa in 2023.
DOI: 10.6084/m9.figshare.24198027
title: <b>Single Cell Map of Human Azoospermia Testis Caused by Chemotherapy</b>

description: Chemotherapeutic drugs will affect the process of spermatogenesis. However, the mechanism of how chemotherapeutic drugs cause spermatogenesis disorder is not clear. Therefore, we have collected the testicular tissues of patients with abdominal tumors whose testes were resected after chemotherapy and patients with normal spermatogenesis and performed sequencing of single-nucleus RNA.
DOI: 10.6084/m9.figshare.24198027.v1
title: <b>Single Cell Map of Human Azoospermia Testis Caused by Chemotherapy</b>

description: Chemotherapeutic drugs will affect the process of spermatogenesis. However, the mechanism of how chemotherapeutic drugs cause spermatogenesis disorder is not clear. Therefore, we have collected the testicular tissues of patients with abdominal tumors whose testes were resected after chemotherapy and patients with normal spermatogenesis and performed sequencing of single-nucleus RNA.
DOI: 10.15129/c12d9beb-8c56-4900-a74f-1395e5830ed4
title: Supplementary material for: "On the relationship between solid particle attractors and thermal inhomogeneities in vibrationally-driven fluid-particle systems"

description: The ".dat" files included in the present dataset can be visualised using Paraview or Tecplot. Note: Paraview or Tecplot must be installed.
DOI: 10.5258/soton/d2036
title: Dataset supporting the publication: The time-course of real-world scene perception: spatial and semantic processing

description: This dataset is supporting the publication "The time-course of real-world scene perception: spatial and semantic processing". The data includes experimental data and key analyses (R and MATLAB scripts) that accompany the paper.
DOI: 10.5517/ccdc.csd.cc29j1rn
title: CCDC 2130591: Experimental Crystal Structure Determination

description: Related Article: Adam T. Hand, Adam C. Lamb, Michael G. Richmond, Xiaoping Wang, Carlos A. Steren, Zi-Ling Xue|2013|Thesis|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h3rbq
title: CCDC 2297513: Experimental Crystal Structure Determination

description: Related Article: chen ming-hua|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h3rcr
title: CCDC 2297514: Experimental Crystal Structure Determination

description: Related Article: chen ming-hua|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.