cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0196684.10fu
title: SH0196684.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0196685.10fu
title: SH0196685.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.xvnjqz
title: Occurrence Download

description: A dataset containing 223700 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (b3bf3a83-1f68-4541-a03f-330d30d567f5, b554c320-0560-11d8-b851-b8a03c50a862, 97a3ce10-3e54-11d9-8439-b8a03c50a862, c49fdf8d-5648-4ae7-b0be-d3d9c67bc755, 493fe050-055d-11d8-b84f-b8a03c50a862, 13fe7a88-3d16-451f-9ee8-66c6275a5e23, a3a2b5eb-9b4c-485f-b4ce-19cfb7de6772, ada9d123-ddb4-467d-8891-806ea8d94230, 66522820-055c-11d8-b84e-b8a03c50a862)",
 "TaxonKey is Arthropoda"
 ]
}

 The dataset includes 223700 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000087-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.87jq53
title: Occurrence Download

description: A dataset containing 560 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Datos de telemetría GPS de dos especies de mamíferos en el municipio de Envigado"
 ]
}

 The dataset includes 560 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000102-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.juepyh
title: Occurrence Download

description: A dataset containing 3863781 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OrderKey is Odonata",
 "Country is one of (Norway, Guernsey, Poland, Denmark, Kosovo, Latvia, France, Slovakia, Romania, Bulgaria, Croatia, Iceland, Ireland, Malta, Åland Islands, North Macedonia, Andorra, Montenegro, Germany, Belarus, Czechia, United Kingdom of Great Britain and Northern Ireland, Switzerland, Belgium, Gibraltar, Portugal, Monaco, Ukraine, Finland, Bosnia and Herzegovina, Hungary, Estonia, Greece, Serbia, Netherlands, Moldova, Republic of, Cyprus, Isle of Man, Lithuania, Slovenia, Albania, Sweden, Liechtenstein, Austria, Italy, Luxembourg, Spain, Jersey)",
 "HasCoordinate is TRUE",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "BasisOfRecord is one of (Living Specimen, Observation, Human Observation, Machine Observation, Occurrence evidence)"
 ]
}

 The dataset includes 3863781 records from 1384 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000068-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ag5k4r
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Spea multiplicata stagnalis Cope, 1875)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000103-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.99u9yf
title: Occurrence Download

description: A dataset containing 10228 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sula leucogaster (Boddaert, 1783)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10228 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000104-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gxcruk
title: Occurrence Download

description: A dataset containing 25286823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Insecta"
 ]
}

 The dataset includes 25286823 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000092-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m934f4
title: Occurrence Download

description: A dataset containing 2638423 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (28eb1a3f-1c15-4a95-931a-4af90ecb574d, c8d737e0-2ff8-42e8-b8fc-6b805d26fc5f, c3ad790a-d426-4ac1-8e32-da61f81f0117, 4ae6aa70-3374-49d3-b0e8-47c2da4fb69a, bb646dff-a905-4403-a49b-6d378c2cf0d9)",
 "TaxonKey is Apidae",
 "Year 1980-2024"
 ]
}

 The dataset includes 2638423 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000093-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mhkfe8
title: Occurrence Download

description: A dataset containing 714 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "Country is one of (Spain, Portugal)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Arion ater (Linnaeus, 1758)",
 "Year 1900-2025"
 ]
}

 The dataset includes 714 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000105-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28303580
title: <b>Quality and costs of commissioned vs. </b><b>researcher-led </b><b>NIHR </b><b>research: retrospective cohort </b><b>study of </b><b>randomised controlled trials</b> - dataset from NIHR Open Data - Funded Portfolio

description: The NIHR provides two main funding pathways: ‘commissioned’ (CP) and ‘researcher-led’ (RLP) projects. CPs are used to ensure NHS priorities are addressed. However, there is uncertainty regarding which provides the highest quality, best value for money, research. We compared the quality and cost of commissioned and research-led projects.We searched the NIHR Funded Portfolio database for randomised controlled trials (RCTs) funded by programmes offering both CP and RLP funding with an end date between 1st January 2018 and 31st December 2018, to allow for publication of full study results. The main outcome was journal impact factor for the main results paper. Other outcomes included: Altmetric score, relative citation ratio, total and per participant funding. T-tests were used to compare mean values.82 eligible RCTs were identified, 30 commissioned and 52 researcher-led. One RLP did not progress beyond pilot; two (one CP and one RLP) did not publish a monograph; and 78 published main study results in a peer-reviewed journal. Among these, RLP projects had higher means scores than CP projects for: journal impact factor (111.2 and 40.8, respectively, p&lt;0.001); Altmetric score (223.8 and 116.8, p=0.05); and relative citation ratio (8.0 and 4.4, p=0.06). Among the full 82 RCTs, RLP mean total study and per participant funding were lower than CP: £1,429,913 vs. £1,353,034, p=0.59; and £11,271 vs. £4425, p=0.08.Researcher-led projects are more likely to result in higher impact research, and are less expensive overall and per participant, compared with commissioned studies. Further research is needed to understand the reasons, which could include: commissioned research addressing harder-to-do questions; commissioning brief quality; and/or research team motivation.
DOI: 10.6084/m9.figshare.28303580.v2
title: <b>Quality and costs of commissioned vs. </b><b>researcher-led </b><b>NIHR </b><b>research: retrospective cohort </b><b>study of </b><b>randomised controlled trials</b> - dataset from NIHR Open Data - Funded Portfolio

description: The NIHR provides two main funding pathways: ‘commissioned’ (CP) and ‘researcher-led’ (RLP) projects. CPs are used to ensure NHS priorities are addressed. However, there is uncertainty regarding which provides the highest quality, best value for money, research. We compared the quality and cost of commissioned and research-led projects. We searched the NIHR Funded Portfolio database for randomised controlled trials (RCTs) funded by programmes offering both CP and RLP funding. The main outcome was journal impact factor for the main results paper. Other outcomes included: Altmetric score, relative citation ratio, total and per participant funding. T-tests were used to compare mean values. 82 eligible RCTs were identified, 30 commissioned and 52 researcher-led. One RLP did not progress beyond pilot; two (one CP and one RLP) did not publish a monograph; and 78 published main study results in a peer-reviewed journal. Among these, RLP projects had higher means scores than CP projects for: journal impact factor (111.2 and 40.8, respectively, p&lt;0.001); Altmetric score (223.8 and 116.8, p=0.05); and relative citation ratio (8.0 and 4.4, p=0.06). Among the full 82 RCTs, RLP mean total study and per participant funding were lower than CP: £1,429,913 vs. £1,353,034, p=0.59; and £11,271 vs. £4425, p=0.08. Researcher-led projects are more likely to result in higher impact research, and are less expensive overall and per participant, compared with commissioned studies. Further research is needed to understand the reasons, which could include: commissioned research addressing harder-to-do questions; commissioning brief quality; and/or research team motivation.
DOI: 10.15468/dl.bwnhju
title: Occurrence Download

description: A dataset containing 560124 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((38.000 85.000, -27.000 85.000, -27.000 56.000, 38.000 56.000, 38.000 85.000))",
 "Year 1876-1899"
 ]
}

 The dataset includes 560124 records from 560 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000082-250213122211068/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a52br9
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Najas schweinfurthii Magnus"
 ]
}

 The dataset includes 21 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023131-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pj52xm
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Najas testui Rendle"
 ]
}

 The dataset includes 32 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023132-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.whw8qj
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Najas welwitschii Rendle"
 ]
}

 The dataset includes 73 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023134-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7vjtf8
title: Occurrence Download

description: A dataset listing the 10 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trachinotus ovatus (Linnaeus, 1758)"
 ]
}

 The dataset's 10 records were derived from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023124-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kxqyay
title: Occurrence Download

description: A dataset containing 2372789 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is 16 - Inventaire général de la flore et de la fonge - CBNA - inventaire général de la flore et de la fonge réalisé sur le terrain"
 ]
}

 The dataset includes 2372789 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023107-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nd23rt
title: Occurrence Download

description: A dataset containing 2215349 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Centralisation des observations floristiques - Observations floristiques issues de la base de données du Conservatoire botanique national alpin"
 ]
}

 The dataset includes 2215349 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023111-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9cuw9v
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Lagochilus diacanthophyllus (Pall.) Benth."
 ]
}

 The dataset includes 129 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023135-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t7vnym
title: Occurrence Download

description: A dataset listing the 28 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((109.0382 0.83203,110.11381 0.86434,110.02729 1.13237,109.71091 1.48283,109.56074 1.78664,109.25274 1.62114,109.11822 1.53365,109.0382 0.83203))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (EN, VU, NT)"
 ]
}

 The dataset's 28 records were derived from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023103-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14037030
title: Data for "A binary system in the S cluster close to the supermassive black hole Sagittarius A*"

description: Data related to the Nature Communications publication "A binary system in the S cluster close to the supermassive black hole Sagittarius A*" (Peißker et al. 2025).

 

The list of data contains science-ready observations from 2019 that were downloaded from the Keck Observatory Archive (KOA). This data can be smoothed with a 3-pixel Gaussian or smooth subtracted with a 6-pixel Gaussian (PSF sized) and smoothed again with a 3-pixel Gaussian. Both methods show D9 at the expected position.

The H and K band continuum images are extracted from a SINFONI data cube. In addition, a Br\gamma line map of the data cube that covers the entire observation epoch in 2019 is added. This file shows three sources: D9, D23, and X8 (see Peißker et al. 2024a for an overview). Some remnants of other G objects can be found.

For the SED fit, we included the input file (d9_input.txt) that can be used with the SED fitter. The fitter is described here https://sedfitter.readthedocs.io/en/stable/index.html and can be downloaded from GitHub (https://github.com/astrofrog/sedfitter).

The fitter used about 10000 individual models that were compared with the input flux (see also Robitaille et al. 2017). The related output file is uploaded here (parameters_d9.txt).

All spectra are extracted using an aperture of radius 2. Please note that the variable background, weather conditions, and data quality may impact the spectrum. A local background subtraction has been applied.

The data for Figure 3 in the manuscript, including the RV model, is uploaded. In addition, the file with the epoch and related Doppler-shifted wavelength is added to this database. 

The spectrum between 2005 and 2019 was observed with SINFONI and shows the Br\gamma emission of D9. In 2022, the Galactic center was observed with ERIS. Again, both spectra show the related Br\gamma emission of D9. Please note a calibration inconsistency for the ERIS observation on 13-06-2022 visible by the line emission of the Brr\gamma bar (Peißker et al. 2020c). This is fixed by an adjusted CRVAL1 value of 1.93432 µm.

In the related manuscript, we present a periodic pattern of the D9 binary system using the data between 2013 and 2019. This data was used for the fitting tool Exo-Stricker. All other data is used to verify our findings. Hence, the data between 2005-2012 and 2022 is not fitted but acts as an independent verification of the findings.

We recommend using QFitsView to inspect the data (https://www.mpe.mpg.de/~ott/QFitsView/).
DOI: 10.5281/zenodo.14037031
title: Data for "A binary system in the S cluster close to the supermassive black hole Sagittarius A*"

description: Data related to the Nature Communications publication "A binary system in the S cluster close to the supermassive black hole Sagittarius A*" (Peißker et al. 2025).

 

The list of data contains science-ready observations from 2019 that were downloaded from the Keck Observatory Archive (KOA). This data can be smoothed with a 3-pixel Gaussian or smooth subtracted with a 6-pixel Gaussian (PSF sized) and smoothed again with a 3-pixel Gaussian. Both methods show D9 at the expected position.

The H and K band continuum images are extracted from a SINFONI data cube. In addition, a Br\gamma line map of the data cube that covers the entire observation epoch in 2019 is added. This file shows three sources: D9, D23, and X8 (see Peißker et al. 2024a for an overview). Some remnants of other G objects can be found.

For the SED fit, we included the input file (d9_input.txt) that can be used with the SED fitter. The fitter is described here https://sedfitter.readthedocs.io/en/stable/index.html and can be downloaded from GitHub (https://github.com/astrofrog/sedfitter).

The fitter used about 10000 individual models that were compared with the input flux (see also Robitaille et al. 2017). The related output file is uploaded here (parameters_d9.txt).

All spectra are extracted using an aperture of radius 2. Please note that the variable background, weather conditions, and data quality may impact the spectrum. A local background subtraction has been applied.

The data for Figure 3 in the manuscript, including the RV model, is uploaded. In addition, the file with the epoch and related Doppler-shifted wavelength is added to this database. 

The spectrum between 2005 and 2019 was observed with SINFONI and shows the Br\gamma emission of D9. In 2022, the Galactic center was observed with ERIS. Again, both spectra show the related Br\gamma emission of D9. Please note a calibration inconsistency for the ERIS observation on 13-06-2022 visible by the line emission of the Brr\gamma bar (Peißker et al. 2020c). This is fixed by an adjusted CRVAL1 value of 1.93432 µm.

In the related manuscript, we present a periodic pattern of the D9 binary system using the data between 2013 and 2019. This data was used for the fitting tool Exo-Stricker. All other data is used to verify our findings. Hence, the data between 2005-2012 and 2022 is not fitted but acts as an independent verification of the findings.

We recommend using QFitsView to inspect the data (https://www.mpe.mpg.de/~ott/QFitsView/).
DOI: 10.15468/dl.ctcyu9
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ottelia cylindrica (T.C.E.Fr.) Dandy"
 ]
}

 The dataset includes 47 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023137-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hybeqr
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Lagochilus hirsutissimus Vved."
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023138-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27860400
title: CS-24.zip

description: CS GRAPE
DOI: 10.6084/m9.figshare.27860400.v1
title: CS-24.zip

description: CS GRAPE
DOI: 10.15468/dl.6c5mkj
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Lagochilus hirtus Fisch. & C.A.Mey."
 ]
}

 The dataset includes 46 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023139-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.