cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/hmhfhnn6v6
title: Comparative transcriptome analysis of muscle of zebrafish (Danio rerio) acclimated to different environmental temperatures

description: Temperature is an important environmental factor that could alter physiological and biochemical process of fish. We hypothesize that long-term temperature acclimation may alter muscle growth and collagen deposition in zebrafish, thus affecting the flesh texture of fish. Here, comparative transcriptome analysis was conducted to explore the potential molecular mechanism underlying the effects of temperature on flesh texture (collagen depostion, muscle fiber growth, etc) of zebrafish. We analyzed the differentially expressed genes (DEGs) between muscle of zebrafish acclimated to different temperatures (18°C，28°C，34°C) . Several important DEGs and KEGG pathways were identified to be potentially involved in the temperature-regulated alternation of flesh texture of fish. File S1: Expression and functional annotation of unigenes in differerent temperature groups; File S2: DEGs of muscle in 18 °C vs 28 °C group; File S3: DEGs of muscle in 28 °C vs 34 °C group； File S4: DEGs of muscle in 18 °C vs 34 °C group； File S5: KEGG pathway enrichment analysis of the DEGs in 18 °C vs 28 °C group; File S6: KEGG pathway distribution of the DEGs in 18 °C vs 28 °C group. File S7: KEGG pathway enrichment analysis of the DEGs in 28 °C vs 34 °C group; File S8: KEGG pathway distribution of the DEGs in 28 °C vs 34 °C group. File S9: KEGG pathway enrichment analysis of the DEGs in 18 °C vs 34 °C group; File S10: KEGG pathway distribution of the DEGs in 18 °C vs 34 °C group.
DOI: 10.17632/sg9k24t4m8
title: A regularization method for nonlinear ill-posed problems

description: Abstract Often, physically interesting functions are not directly accessible by an experiment, and must be calculated from data of an experimental accessible quantity. If this calculation requires the inversion of a Fredholm integral equation of the first kind, the determination of the physically interesting function is an ill-posed problem. In this case, linear regularization methods should be used to perform the calculations. However, in several applications the relation between the interesting func... Title of program: NLREG Catalogue Id: ACGH_v2_0 [ACPF] Nature of problem Physically interesting functions are often not directly accessible by an experiment, and must be calculated from data of an experimental accessible quantity. In many cases this calculation requires the inversion of a nonlinear integral equation, and a nonlinear regularization method should be applied. Versions of this program held in the CPC repository in Mendeley Data ACGH_v1_0; FTIKREG; 10.1016/0010-4655(92)90132-I ACGH_v2_0; NLREG; 10.1016/0010-4655(93)90187-H ACGH_v3_0; GENEREG; 10.1016/S0010-4655(01)00217-X This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/wvxtsmmdkd
title: Major CHD

description: Assessment of accuracy of prenatal diagnosis of major congenital heart disease
DOI: 10.17632/v5dryspfy4
title: Strong Families: A new family skills training programme for challenged and humanitarian settings: a single-arm intervention tested in Afghanistan

description: Background Children living in challenged humanitarian settings are at greater risk of mental health difficulties or behavioural problems, with caregivers acting as their main protective factors. While many family skills programmes exist, very few were developed for or piloted in families living in low resource settings. We therefore designed a brief and light programme and conducted an effectiveness trial in Afghanistan. Methods We recruited female caregivers and children aged 8-12 years via schools and drug treatment centres in Afghanistan and enrolled them in a family skills programme over three weeks. Demographic data, emotional and behavioural difficulties of children and parental skills and family adjustment measures were collected from caregivers before, two and six weeks after the intervention. Outcome was assessed through the SDQ (Strengths and Difficulties Questionnaire) and PAFAS (Parenting and Family Adjustment Scales). Results We enrolled 72 families in the programme and followed 93·1% up overall. Mean age of caregivers was 36·1 years, they had 3·8 children on average and 91·7% of them had experienced war/armed conflict in their past. The total difficulty score of the SDQ of the 72 children reduced significantly, from 17.8 at pre-test to 12.9 at post-test and 10.6 at follow-up, with no difference in gender and mostly in those with highest scores at baseline. Likewise, PAFAS scores improved significantly after the programme, again with caregivers with the highest scores at baseline improving most. Conclusions The implementation of a brief family skills programme was feasible in a resource-limited setting and had an impact on child mental health and parenting practices and family adjustment skills. This indicated the value of such programme and the feasibility to move it to scale. The effects need to be verified through an RCT and with longer follow-ups. The results are submitted for peer-reviewed publication.
DOI: 10.6084/m9.figshare.c.3471585_d76.v1
title: NOTO Observatory, Japan, submicron aerosol size distribution, 2014 – 2015

description: submicron aerosol size distribution, Noto Peninsula, Japan, 2014 – 2015
DOI: 10.15468/dl.hgvnyv
title: Occurrence Download

description: A dataset containing 968 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Observation, Human Observation, Machine Observation, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Meliscaeva auricollis (Meigen, 1822)"
 ]
}

 The dataset includes 968 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009165-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/2ksgkp3crh
title: MGNREGA DATA (2024-2025)

description: The dataset is obtained from the Government of India MGNREGA Portal, which provides official and regularly updated information on job cards, work completion rates, fund disbursement records, and grievance logs (Ministry of Rural Development, Government of India, 2025)
DOI: 10.17632/kbvcdw5b4m
title: Data for: Clinical Mastitis in Cows based on Udder Parameter using Internet of Things (IoT)

description: The data is collected from the udder of a cow to detect clinical mastitis. The four flex sensors and a temperature sensor are used to collect the udder data. Milk image is processed to find the quality of milk which also affects clinical mastitis. In the milk quality attribute, 0 indicates the normal milk and 1 indicates the abnormal milk. The data attributes are Cow_ID, Day, Breed, Month after giving birth, previous occurrence of mastitis, size of an udder (udder front left inhale and exhale limit, udder front right inhale and exhale limit, udder rear left inhale and exhale limit, udder rear right inhale and exhale limit), the temperature of a cow, the hardness of an udder from user input via a switch, and pain due to swelling of an udder. There are two class normal cows indicated as 0 and mastitis cow indicated as 1. By analyzing the data using an efficient algorithm faster track of clinical mastitis in the cow is provided. The SAC is designed to deploy flex sensors and temperature sensor, using raspberry pi and analog to digital converter data from the sensors are wirelessly collected. As sensors are connected to the internet the IoT is in the picture to gather data. The IoT is used to monitor animal health so the concept is called the Internet of Animal Health Things (IoAHT).
DOI: 10.6084/m9.figshare.6303311.v1
title: Supplementary Material for: The Neonatal Microbiome and Its Partial Role in Mediating the Association between Birth by Cesarean Section and Adverse Pediatric Outcomes

description: <b><i>Background:</i></b> Cesarean sections (CS) are among the most commonly performed surgical procedures in the world. Epidemiologic data has associated delivery by CS with an increased risk of certain adverse health outcomes in children, such as asthma and obesity. <b><i>Objective:</i></b> To explore what is known about the effect of mode of delivery on the development of the infant microbiome and discuss the potentially mediating role of CS-related microbial dysbiosis in the development of adverse pediatric health outcomes. Recommendations for future inquiry are also provided. <b><i>Methods:</i></b> This study provides a narrative overview of the literature synthesizing the findings of literature retrieved from searches of PubMed and other computerized databases and authoritative texts. <b><i>Results:</i></b> Emerging evidence suggests that mode of delivery is involved in the development of the neonatal microbiome and may partially explain pediatric health outcomes associated with birth by CS. Specifically, the gut microbiome of vaginally delivered infants more closely resembles their mothers’ vaginal microbiome and thus more commonly consists of potentially beneficial microbiota such as <i>Lactobacillus</i>,<i> Bifidobacterium</i>, and <i>Bacteroides</i>. Conversely, the microbiome of infants born via CS shows an increased prevalence of either skin flora or potentially pathogenic microbial communities such as <i>Klebsiella</i>, <i>Enterococcus</i>, and <i>Clostridium</i>. <b><i>Conclusions:</i></b> Mode of delivery plays an important role in the development of the postnatal microbiome but likely tells only part of the story. More comprehensive investigations into all the pre- and perinatal factors that have the potential to contribute to the neonatal microbiome are warranted.
DOI: 10.17632/2st8vvckw3
title: Time_distribution

description: Data on the digital psytools platform, where the response time for questions in the demographic test is stored
DOI: 10.17632/ydcv5s452n
title: Detecting DWI-Negative Strokes in Rat Models of Acute Internal Carotid Artery Occlusion using Magnetic Resonance Spectroscopy

description: It has been reported that approximately 6.8% of patients may exhibit DWI-negative results in the early phase of acute ischemic stroke (AIS). The primary reason is the reopening of obstructed vessels or compensation by collateral circulation, resulting in the rapid normalization of DWI signals. In conclusion, early DWI examination in AIS patients may lead to missed diagnoses. Therefore, it is essential to develop a method that can accurately, objectively, and effectively identify AICAO combined with AIS in the early stage, which is critical for guiding clinical decisions and improving patient outcomes. In a study by Krishna A. Dani involving 32 AIS patients, MRS detected increased lactate levels in some patients earlier than the appearance of positive DWI findings. Based on these findings, we hypothesize that MRS can detect early brain ischemia and hypoxia in AICAO combined with AIS patients and may identify AIS earlier than DWI sequences, thus guiding clinical decisions. In this study, we established a rat AICAO model and performed DWI and MRS scans at two- and twelve-hours post-modeling to evaluate whether MRS can detect early brain damage in AICAO combined with AIS more effectively than DWI.
DOI: 10.6084/m9.figshare.24872034.v5
title: The tectonic responses in the overriding plate during the Tethyan convergence and the progressive extrusion process in Sundaland: insights from the Wuliangshan massif, SE Tibetan Plateau

description: We present the results of Titanium-in-quartz, zircon U-Pb, and Hf isotope analyses for the Wuliangshan massif in the southeast Tibetan Plateau. These data reveal that the Wuliangshan massif records the tectonic response of the overriding plate to the closure of the Paleo-Tethys. Then, statistics of <sup>40</sup>Ar/<sup>39</sup>Ar age data from the Ailaoshan-Red River Fault, the Chongshan-Lancang River Fault, and the Gaoligong Fault are presented to discuss the tectonic extrusion process of the Sundaland.
DOI: 10.6084/m9.figshare.5048449.v1
title: Supplementary Material for: Emery-Dreifuss Muscular Dystrophy-Associated Mutant Forms of Lamin A Recruit the Stress Responsive Protein Ankrd2 into the Nucleus, Affecting the Cellular Response to Oxidative Stress

description: <i>Background:</i> Ankrd2 is a stress responsive protein mainly expressed in muscle cells. Upon the application of oxidative stress, Ankrd2 translocates into the nucleus where it regulates the activity of genes involved in cellular response to stress. Emery-Dreifuss Muscular Dystrophy 2 (EDMD2) is a muscular disorder caused by mutations of the gene encoding lamin A, <i>LMNA</i>. As well as many phenotypic abnormalities, EDMD2 muscle cells also feature a permanent basal stress state, the underlying molecular mechanisms of which are currently unclear. <i>Methods:</i> Experiments were performed in EDMD2-lamin A overexpressing cell lines and EDMD2-affected human myotubes. Oxidative stress was produced by H2O2 treatment. Co-immunoprecipitation, cellular subfractionation and immunofluorescence analysis were used to validate the relation between Ankrd2 and forms of lamin A; cellular sensibility to stress was monitored by the analysis of Reactive Oxygen Species (ROS) release and cell viability. <i>Results:</i> Our data demonstrate that oxidative stress induces the formation of a complex between Ankrd2 and lamin A. However, EDMD2-lamin A mutants were able to bind and mislocalize Ankrd2 in the nucleus even under basal conditions. Nonetheless, cells co-expressing Ankrd2 and EDMD2-lamin A mutants were more sensitive to oxidative stress than the Ankrd2-wild type lamin A counterpart. <i>Conclusions:</i> For the first time, we present evidence that in muscle fibers from patients affected by EDMD2, Ankrd2 has an unusual nuclear localization. By introducing a plausible mechanism ruling this accumulation, our data hint at a novel function of Ankrd2 in the pathogenesis of EDMD2-affected cells.
DOI: 10.6084/m9.figshare.26340670.v1
title: Atomistic configurations of EC and DEC solvents and their related surface models.

description: Atomistic configurations of the Oct moiety, EC and DEC solvents on the Cu(111) substrate, as well as the surface models of Li (110), Sn (110), and Li<sub>5</sub>Sn<sub>2</sub> (110), have been constructed and developed.
DOI: 10.17632/545p47rc3c
title: Supplemental Material: Modified linear closure with standing cone management: an alternative to the purse string suture

description: Supplemental Figure 1. A; Side by side closure of remaining linear wound resulting in complete
101 dermal approximation. B; 2 months after repair. 
Video 1. Demonstration of initial suture placement to create the wound apices.
DOI: 10.17632/zmsvrzpky5
title: Journal of Methodology of Social Sciences and Humanities ; No.81

description: Study of the relationship between philosophy, philosophy of social sciences and humanities, methodology and research method; 
 The role of philosophy and methodology of social sciences and humanities in the quantitative and qualitative improvement of the social sciences and humanities;
 Comparative study of philosophy and methodology of social sciences and humanities and natural sciences;
 Study of the evolution of philosophy and methodology of social sciences and humanities;
 Comparative examination of quantitative and qualitative research methods;
 Philosophical analysis of concepts used in the social sciences and humanities;
 The study of the philosophical and theological foundations of the production of religious and indigenous social sciences and humanities;
 Methodology of the production of religious and indigenous social sciences and humanities;
 Methodology of using religious texts in social sciences and humanities and social sciences;
 Methodology of Muslim scholars in social studies;
 The deficiencies of the social sciences and humanities in the field of goals, foundations, methods and achievements;
 Philosophical and methodological assessment of studies in the field of humanities and social sciences;
 Philosophical and methodological assessment of studies in the field of Islamic humanities and social sciences;
 Philosophical and methodological assessment of macro policies of the country in the scientific, economic, political, social and cultural fields

To let individual researchers and libraries have access to the most recent research findings in the field, the journal allows open-access to its articles.
DOI: 10.6084/m9.figshare.5594161.v2
title: Estimación de voto/Resultados Metroscopia con Ciudadanos

description: Estimación/Resultados en Metroscopia con Ciudadanos<br>
DOI: 10.6084/m9.figshare.11406549.v1
title: Supplementary Material for: Taurine Supplementation Reverses Diabetes-Induced Podocytes Injury via Modulation of the CSE/TRPC6 Axis and Improvement of Mitochondrial Function

description: <b><i>Background:</i></b> The protective effects of taurine supplementation on diabetic kidney disease (DKD) have been defined, but the mechanisms are not quite clear yet. TRPC6 has been shown to function in the homeostasis of podocytes, but whether TRPC6-modulated mitochondrial dysfunctions participating in taurine-induced renal protection during diabetes are unclear. <b><i>Methods:</i></b> A DKD model was constructed using streptozocin (STZ), and an immortalized mouse podocytes cell line MPC-5 was used. Renal histology and western blot were used to analyze the expression levels of certain proteins. Cell proliferation assays, apoptosis assays, calcium influx, and mitochondrial functions were evaluated. <b><i>Results:</i></b> In this study, taurine intervention improved STZ-induced DKD injuries, while it decreased both 24-h urinary protein and podocytes apoptosis. In detail, this study showed that taurine treatment decreased mitochondrial ROS productions by suppressing calcium overload and improving mitochondrial respiratory functions. Furthermore, the upregulation of TRPC6 is partially responsible for the calcium overload during high glucose treatment, whereas taurine treatment inhibited TRPC6 expression and partially attenuated high glucose-induced podocytes injuries. In addition, we demonstrated that taurine could upregulate CSE expression and inhibits TRPC6 expression via promoting the synthesis of H<sub>2</sub>S. <b><i>Conclusion:</i></b> Our study reveals that taurine intervention could partially attenuate the lesions of DKD by modulating the CSE/TRPC6 axis.
DOI: 10.6084/m9.figshare.26362588.v1
title: Supplementary Material for: Diagnostic utility of preserved dried umbilical cord PCR in intrauterine herpes simplex virus infection: A case report and literature review

description: Introduction: Intrauterine herpes simplex virus (HSV) infection is uncommon and challenging to diagnose, requiring detection of HSV in skin lesions within 48 hours post-birth. Case Presentation: A preterm female infant presented with the typical triad of blisters, microcephaly, and chorioretinitis, but the initial diagnostic approach was elusive due to negative results for TORCH pathogens from vesicles/serum. Referred at 7 months for developmental delay and epilepsy, her brain imaging showed calcification and cortical dysplasia. Polymerase chain reaction (PCR) of her preserved dried umbilical cord detected HSV-2 DNA, diagnosing intrauterine HSV infection. HSV-2 was later found in relapsed blisters at 8 months but not in cerebrospinal fluid or brain tissue. A literature review identified 104 congenital/intrauterine HSV cases; 28.8% presented the typical triad, and 50% were diagnosed using specimens collected 48 hours post-birth. Conclusion: This case marks the first retrospective diagnosis of intrauterine HSV infection via PCR on preserved umbilical cord, underscoring its diagnostic value.
DOI: 10.17632/2845znt54k
title: Data for: Regional unit definition for the nucleus of comet 67P/Churyumov-Gerasimenko on the SHAP7 model

description: .vtk files (compatible with ParaView) for visualizing the 67P/Churyumov-Gerasimenko shape model with the region and sub-region definitions (Thomas et al., 2018, submitted to PSS). The files here are the 125k facet models. Higher resolution models will be upload after acceptance of the paper.
DOI: 10.17632/ck59dft6bm
title: big data technologies inhibit shadow banking activity of non-financial firms: evidence from textual analysis in China

description: all supporting data and log document relevant to the effects of big data technologies on shadow banking activities of non-financial firms
DOI: 10.17632/fv9z323cmy
title: Evidence supporting the MICU1 occlusion mechanism and against the potentiation model in the mitochondrial calcium uniporter complex. Tsai et al.

description: Unprocessed raw Western-blot or BN-PAGE images used in the figures in Tsai et al., PNAS, 2023.
DOI: 10.6084/m9.figshare.1289358.v1
title: Galatanet 1

description: Raw data describing a survey conducted on students at the Galatasaray University (Istanbul, Turkey) in 2009. The archive also contains the student social network extracted from the data.
DOI: 10.6084/m9.figshare.17871734.v2
title: Multiple sequence alignment files and Perl scripts for P. minor genome

description: Multiple sequence alignment file of five gene family phylogenetic analysis to show the gene sequences used in tree building and two in-house Perl scripts for gene structure features and gap position removal.
DOI: 10.17632/7p84fmp3pb
title: Data for: Study of Morphology and Degradation of Lunar Craters using Chandrayaan–1 Data
DOI: 10.17632/hgph86s73j
title: Lipid and carotenoid production in cane molasses by Rhodosporidium toruloides mutant

description: Cane molasses, as a low-cost carbon source, is suitable for the lipid and carotenoids yields in microalgae or microorganisms. In this study, we investigated the lipid and carotenoid production profile of R. toruloides mutant M18 (MT) in a defined media with various amounts of pretreated cane molasses (TM) under nitrogen-limited conditions. The production of palmitic acid (C16:0) and α-linolenic acid (C18:3) from MT were improved by 16.92% and 21.88% in 100% TM compared to the wild type strain (WT). The torularhodin, torulene and β-carotene content of the MT with cane molasses under nitrogen-limited conditions were 14.68, 1.41 and 1.11-fold higher than that of the WT, respectively. Compared with the effects of cane molasses concentrations on lipid production, we found that cane molasses concentration of 35 g/L (50% TM) and 70 g/L (100% TM) as a low-cost carbon source, is an economical and green strategy for the production of lipid and carotenoids by MT, respectively. Transcriptome sequencing and WGCNA analysis revealed that differentially expressed genes in blue module were identified as significantly highly expressed and were relevant and consistent with the results of phenotype performance of lipid and carotenoids accumulation responses to the stress in cane molasses under nitrogen-limited conditions between the MT and WT strains, including MYB, bHLH, Δ-4 desaturase, Δ-12 desaturase and FA2H genes. Cane molasses, as an alternative to glucose-based medium, is suitable for lipid and carotenoid yields in R. toruloides, which makes it serve as a valuable reference for a cost-saving substance in industrial applications.
DOI: 10.17632/kppptn9vtg
title: Data for: Stock market reactions to domestic sentiment: Panel CS-ARDL evidence

description: Our empirical analysis relies on monthly panel data for 29 economies, split into 15 and 14 developed and emerging market countries, respectively. Due to restricted data availability, the sample period extends from January 2003 to December 2018 for all countries. We consider two alternative composite confidence indicators, namely, business and consumer confidence indices, to proxy for domestic sentiment.
DOI: 10.17632/twxcmd75x3
title: Data for: Advanced Detector Signal Acquisition and Electron Beam Scanning for High Resolution SEM Imaging

description: Source code and examples for custom scan controller SEM image collection and post processing