DOI: 10.22002/p3kcb-tdc82
title: Thiomonas intermedia

description: T. intermedia cell h3
description: <strong>Tilt Series Date:</strong> 2007-10-05</p>
<strong>Data Taken By:</strong> Cristina Iancu</p>
<strong>Species / Specimen:</strong> Thiomonas intermedia</p>
<strong>Strain:</strong> K12</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
  civ2007-10-05-5_slicer4802.jpg: Unknown filaments civ2007-10-05-5_slicer4803.jpg: Unknown filaments civ2007-10-05-5_slicer4807.jpg: Unknown / Dividing civ2007-10-05-5_slicer4808.jpg: Unknown filament civ2007-10-05-5_slicer10382.jpg: filament bundle .  Thiomonas intermedia .  snapshot by Megan
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-5/rawdata/</p>Ti_mm22h_h3d_180e12um18K_5oct07.mrc,  Tilt Series (Pixel Size 1.259 nm), 973.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-5/rawdata/Ti_mm22h_h3d_180e12um18K_5oct07.mrc"
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        Ti_mm22h_h3d_180e12um18K_5oct07_bin1.rec,  Reconstruction (Pixel Size 0.0 nm), 752.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-5/3dimage_4232/Ti_mm22h_h3d_180e12um18K_5oct07_bin1.rec"
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        ci2007-10-05-5_clip01.rec,  Reconstruction (Pixel Size 0.0 nm) cropped by Sarah, 205.0 MB  
        
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        ci2007-10-05-5_clip02.rec,  Reconstruction (Pixel Size 0.0 nm) cropped by Sarah, 179.5 MB  
        
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        Ti_mm22h_h3d_180e12um18K_5oct07_bin2_s90_filam.tif,  2.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-5/file_2304/Ti_mm22h_h3d_180e12um18K_5oct07_bin2_s90_filam.tif"
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        Ti_mm22h_h3d_180e12um18K_5oct07_bin2_s64_Pi_rub.tif,  2.2 MB  
        
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        Ti_mm22h_h3d_180e12um18K_5oct07_bin2_s54_Pistring.tif,  2.2 MB  
        
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        Ti_mm22h_h3d_180e12um18K_5oct07_bin2_s40_Pineedle.tif,  2.2 MB  
        
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        Ti_mm22h_h3d_180e12um18K_5oct07_bin2_s66_Pirub.tif,  1.3 MB  
        
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        Ti_mm22h_h3d_180e12um18K_5oct07_bin2_5ave_rec.mov,  file associated to 3D Image #4232, 20.2 MB  
        
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        ci2007-10-05-5_clip01-label-Filament01.am,  filament segmented by Sarah, 3.3 MB  
        
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        ci2007-10-05-5_clip01-label-Filament02.am,  filament segmented by Sarah, 3.2 MB  
        
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        ci2007-10-05-5_clip02-label-Filament01.am,  filament segmented by Sarah, 2.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-10-05-5/file_2908/ci2007-10-05-5_clip02-label-Filament01.am"
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        ci2007-10-05-5_clip02-label-Filament02.am,  filament segmented by Sarah, 2.8 MB  
        
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