cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.999142.v1
title: Gaussian Job Archive for C6H14O4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999143.v1
title: A fuzzy multiple-attribute decision-making modelling for vulnerability analysis on the basis of population information for disaster management

description: Research activity and published literature on the reliability and vulnerability analysis of urban areas for disaster management has grown tremendously in the recent past. Population information has played the most important role during the entire disaster management process. In this article, population information was used as the evaluation criterion, and a fuzzy multiple-attribute decision-making (MADM) approach was used to support a vulnerability analysis of the Helsinki area for disaster management. A kernel density map was produced as a result that showed the vulnerable spatial locations in the event of a disaster. Model results were first validated against the original population information kernel density maps. In the second step, the model was validated by using fuzzy set accuracy assessment and the actual domain knowledge of the rescue experts. This is a novel approach to validation, which makes it possible to see how and if computer decision-making models compare to a real decision-making process in disaster management. The validation results showed that the fuzzy model has produced a reasonably accurate result. By using fuzzy modelling, the number of vulnerable areas was reduced to a reasonable scale and compares to the actual human assessment of these areas, which allows resources to be optimised during the rescue planning and operation.
DOI: 10.6084/m9.figshare.999143.v2
title: A fuzzy multiple-attribute decision-making modelling for vulnerability analysis on the basis of population information for disaster management

description: Research activity and published literature on the reliability and vulnerability analysis of urban areas for disaster management has grown tremendously in the recent past. Population information has played the most important role during the entire disaster management process. In this article, population information was used as the evaluation criterion, and a fuzzy multiple-attribute decision-making (MADM) approach was used to support a vulnerability analysis of the Helsinki area for disaster management. A kernel density map was produced as a result that showed the vulnerable spatial locations in the event of a disaster. Model results were first validated against the original population information kernel density maps. In the second step, the model was validated by using fuzzy set accuracy assessment and the actual domain knowledge of the rescue experts. This is a novel approach to validation, which makes it possible to see how and if computer decision-making models compare to a real decision-making process in disaster management. The validation results showed that the fuzzy model has produced a reasonably accurate result. By using fuzzy modelling, the number of vulnerable areas was reduced to a reasonable scale and compares to the actual human assessment of these areas, which allows resources to be optimised during the rescue planning and operation.
DOI: 10.6084/m9.figshare.999139.v1
title: Gaussian Job Archive for C6H14O4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999124
title: Gaussian Job Archive for C7H7F3O3S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999123
title: Gaussian Job Archive for C7H7F3O3S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999124.v1
title: Gaussian Job Archive for C7H7F3O3S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999122
title: Gaussian Job Archive for C11H8F6O2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999123.v1
title: Gaussian Job Archive for C7H7F3O3S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999120
title: Gaussian Job Archive for C9H7F9O2S

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999122.v1
title: Gaussian Job Archive for C11H8F6O2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999118
title: Gaussian Job Archive for C6H12N2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999118.v1
title: Gaussian Job Archive for C6H12N2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999090
title: Processed APC Data from QUB using Open Article Gauge

description: The Article Processing Charges data released by QUB (http://dx.doi.org/10.6084/m9.figshare.997733) was processed using the Open Article Gauge (http://howopenisit.org) to determine licenses automatically. The OAG performed well apart from one (known) issue with a rare BMC licenses statement that needs to be fixed. In a few cases the publisher is not yet supported so a free-to-read paper is reported as failed-to-obtain-license. In one case (AIP) it is unclear how we could fix that in practice.
DOI: 10.6084/m9.figshare.999091
title: Identification of epitopes of the A1aBx and A5A4B3 subunits of glycinin antigenic in three animal species

description: Soybean meal is commonly added to a variety of animal feeds to supplement protein sources and to optimise growth. While soybean protein is a valuable food supplement it has been recognised as an important food allergen. The soybean seed storage protein, glycinin, has been identified as an allergen. A tiled peptide array of the A1aBx and A5A4B3 subunits of glycinin was screened to identify the epitopes that bind antibodies from multiple species. We have identified four regions in these two glycinin subunits that are antigenic in most or all of the species tested. One region is implicated in an allergic response in dogs by the dog's ability to bind IgE. Three regions overlap or abut regions that are similar to allergenic epitopes in peanut. It will be critical to identify immunogenic regions able to cause allergies to soy in order to prioritise them for mitigation.
DOI: 10.6084/m9.figshare.999090.v1
title: Processed APC Data from QUB using Open Article Gauge

description: The Article Processing Charges data released by QUB (http://dx.doi.org/10.6084/m9.figshare.997733) was processed using the Open Article Gauge (http://howopenisit.org) to determine licenses automatically. The OAG performed well apart from one (known) issue with a rare BMC licenses statement that needs to be fixed. In a few cases the publisher is not yet supported so a free-to-read paper is reported as failed-to-obtain-license. In one case (AIP) it is unclear how we could fix that in practice.
DOI: 10.6084/m9.figshare.999069
title: Carnivore Prey Mass - Minimum, Maximum and Range

description: Appendix S1 Database of predator body mass values and prey body mass values, including sources. Data from Tucker and Rogers, Examining the prey mass of terrestrial and aquatic carnivorous mammals: minimum, maximum and range.
DOI: 10.6084/m9.figshare.999091.v2
title: Identification of epitopes of the A1aBx and A5A4B3 subunits of glycinin antigenic in three animal species

description: Soybean meal is commonly added to a variety of animal feeds to supplement protein sources and to optimise growth. While soybean protein is a valuable food supplement it has been recognised as an important food allergen. The soybean seed storage protein, glycinin, has been identified as an allergen. A tiled peptide array of the A1aBx and A5A4B3 subunits of glycinin was screened to identify the epitopes that bind antibodies from multiple species. We have identified four regions in these two glycinin subunits that are antigenic in most or all of the species tested. One region is implicated in an allergic response in dogs by the dog's ability to bind IgE. Three regions overlap or abut regions that are similar to allergenic epitopes in peanut. It will be critical to identify immunogenic regions able to cause allergies to soy in order to prioritise them for mitigation.
DOI: 10.6084/m9.figshare.999066
title: Gaussian Job Archive for C6H12O3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999066.v1
title: Gaussian Job Archive for C6H12O3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999091.v1
title: Identification of epitopes of the A1aBx and A5A4B3 subunits of glycinin antigenic in three animal species

description: Soybean meal is commonly added to a variety of animal feeds to supplement protein sources and to optimise growth. While soybean protein is a valuable food supplement it has been recognised as an important food allergen. The soybean seed storage protein, glycinin, has been identified as an allergen. A tiled peptide array of the A1aBx and A5A4B3 subunits of glycinin was screened to identify the epitopes that bind antibodies from multiple species. We have identified four regions in these two glycinin subunits that are antigenic in most or all of the species tested. One region is implicated in an allergic response in dogs by the dog's ability to bind IgE. Three regions overlap or abut regions that are similar to allergenic epitopes in peanut. It will be critical to identify immunogenic regions able to cause allergies to soy in order to prioritise them for mitigation.
DOI: 10.6084/m9.figshare.999065
title: Gaussian Job Archive for C6H14O4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.999062
title: Mammalian Predator-Prey Body-Mass Data

description: <strong>Appendix S1</strong> Database of mean daily energetic expenditure, mean daily energetic intake and mean prey body size for 107 carnivorous mammal species and associated references. Data from Tucker, Ord & Rogers. Revisiting the Cost of Carnivory in Mammals.
DOI: 10.6084/m9.figshare.999065.v1
title: Gaussian Job Archive for C6H14O4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.997784
title: Microbial Diversity in Uranium Deposits from Jaduguda and Bagjata Uranium Mines, India as Revealed by Clone Library and Denaturing Gradient Gel Electrophoresis Analyses

description: Microbial communities within subsurface uranium (U) deposits were explored to understand the nature of community composition and their potential role in biogeochemical cycle and bioremediation. Geochemical analysis revealed that the U ores were mainly hosted on metamorphosed chlorite-biotite schists, containing varied organic carbon and elevated level of several heavy metals (U, Cu, Cr, Zn, etc.). Microbial diversity as explored by 16S rRNA gene clone library and DGGE analyses revealed predominance of <i>Proteobacteria</i>, <i>Acidobacteria</i>, <i>Bacteroidetes</i> along with <i>Firmicutes</i> and candidate division OP9 within the domain <i>Bacteria</i> and <i>Euryarchaeota</i> within the domain <i>Archaea</i>. Among the physiochemical parameters, level of organic carbon showed considerable impact on influencing community diversity and composition. Samples from Jaduguda with high organic carbon showed abundance of bacteria known for metabolizing different carbon compounds and affiliated to unclassified uncultured members of <i>Chitnophagaceae</i> (<i>Bacteroidetes</i>), Gp4 of <i>Acidobacteria</i> and unclassified β-<i>Proteobacteria</i> and halophilic, nitrate-reducing γ-<i>Proteobacteria</i>. A relatively diverse assemblage of species capable of autotrophic/heterotrophic N<sub>2</sub> fixation, CH<sub>4</sub> utilization, H<sub>2</sub>(0)/Fe(II)/Mn(II)/S(0) oxidation, NO<sub>3</sub>/Fe(III) reduction, U and other metal precipitation/mineralization and affiliated to families <i>Rhizobiaceae, Bradyrhizobiaceae, Caulobacteraceae</i>, <i>Comamonadaceae</i> and genera <i>Acinetobacter, Marinobacter</i> and <i>Alcanivorax</i> constituted the Bagjata samples. Distribution and interrelations among abundance of various bacterial groups detected in other U mines/radioactive waste sites were compared with our data. Overall, the study reported distinct compositions of indigenous microbial communities among the samples from two mines and provided a better insight in geomicrobiology of U deposits.
DOI: 10.6084/m9.figshare.997784.v2
title: Microbial Diversity in Uranium Deposits from Jaduguda and Bagjata Uranium Mines, India as Revealed by Clone Library and Denaturing Gradient Gel Electrophoresis Analyses

description: Microbial communities within subsurface uranium (U) deposits were explored to understand the nature of community composition and their potential role in biogeochemical cycle and bioremediation. Geochemical analysis revealed that the U ores were mainly hosted on metamorphosed chlorite-biotite schists, containing varied organic carbon and elevated level of several heavy metals (U, Cu, Cr, Zn, etc.). Microbial diversity as explored by 16S rRNA gene clone library and DGGE analyses revealed predominance of <i>Proteobacteria</i>, <i>Acidobacteria</i>, <i>Bacteroidetes</i> along with <i>Firmicutes</i> and candidate division OP9 within the domain <i>Bacteria</i> and <i>Euryarchaeota</i> within the domain <i>Archaea</i>. Among the physiochemical parameters, level of organic carbon showed considerable impact on influencing community diversity and composition. Samples from Jaduguda with high organic carbon showed abundance of bacteria known for metabolizing different carbon compounds and affiliated to unclassified uncultured members of <i>Chitnophagaceae</i> (<i>Bacteroidetes</i>), Gp4 of <i>Acidobacteria</i> and unclassified β-<i>Proteobacteria</i> and halophilic, nitrate-reducing γ-<i>Proteobacteria</i>. A relatively diverse assemblage of species capable of autotrophic/heterotrophic N<sub>2</sub> fixation, CH<sub>4</sub> utilization, H<sub>2</sub>(0)/Fe(II)/Mn(II)/S(0) oxidation, NO<sub>3</sub>/Fe(III) reduction, U and other metal precipitation/mineralization and affiliated to families <i>Rhizobiaceae, Bradyrhizobiaceae, Caulobacteraceae</i>, <i>Comamonadaceae</i> and genera <i>Acinetobacter, Marinobacter</i> and <i>Alcanivorax</i> constituted the Bagjata samples. Distribution and interrelations among abundance of various bacterial groups detected in other U mines/radioactive waste sites were compared with our data. Overall, the study reported distinct compositions of indigenous microbial communities among the samples from two mines and provided a better insight in geomicrobiology of U deposits.
DOI: 10.6084/m9.figshare.997784.v1
title: Microbial Diversity in Uranium Deposits from Jaduguda and Bagjata Uranium Mines, India as revealed by clone library and Denaturing Gradient Gel Electrophoresis analyses

description: Microbial communities within subsurface uranium (U) deposits were explored to understand the nature of community composition and their potential role in biogeochemical cycle and bioremediation. Geochemical analysis revealed that the U ores were mainly hosted on metamorphosed chlorite-biotite schists, containing varied organic carbon and elevated level of several heavy metals (U, Cu, Cr, Zn, etc.). Microbial diversity as explored by 16S rRNA gene clone library and DGGE analyses of revealed predominance of <i>Proteobacteria</i>, <i>Acidobacteria</i>, <i>Bacteroidetes</i> along with <i>Firmicutes</i> and candidate division OP9 within domain <i>Bacteria</i> and <i>Euryarchaeota</i> within the domain <i>Archaea</i>. Among the physiochemical parameters, level of organic carbon showed considerable impact on influencing community diversity and composition. Samples from Jaduguda with high organic carbon showed abundance of bacteria known for metabolizing different carbon compounds and affiliated to unclassified uncultured members of <i>Chitnophagaceae</i> (<i>Bacteroidetes</i>), Gp4 of <i>Acidobacteria</i> and unclassified β<i> Proteobacteria</i> and halophilic, nitrate reducing γ<i> Proteobacteria</i>. A relatively diverse assemblage of species capable of autotrophic/heterotrophic N<sub>2</sub> fixation, CH<sub>4</sub> utilization, H<sub>2</sub>(0)/Fe(II)/Mn(II)/S(0) oxidation, NO<sub>3</sub>/Fe(III) reduction, U and other metal precipitation/mineralization and affiliated to families <i>Rhizobiaceae, Bradyrhizobiaceae, Caulobacteraceae</i>, <i>Comamonadaceae</i> and genera <i>Acinetobacter, Marinobacter</i> and <i>Alcanivorax</i> constituted the Bagjata samples. Distribution and interrelations among abundance of various bacterial groups detected in various other U mines/radioactive waste sites were compared with our data. Overall, the study reported distinct compositions of indigenous microbial communities among the samples from two mines and provided a better insight in geomicrobiology of U deposits.
DOI: 10.6084/m9.figshare.999062.v3
title: Mammalian Predator-Prey Body-Mass Data

description: <strong>Appendix S1</strong> Database of mean daily energetic expenditure, mean daily energetic intake and mean prey body size for 107 carnivorous mammal species and associated references. Data from Tucker, Ord & Rogers. The Cost of Carnivory Revisited.
DOI: 10.6084/m9.figshare.999062.v4
title: Mammalian Predator-Prey Body-Mass Data

description: <strong>Appendix S1</strong> Database of mean daily energetic expenditure, mean daily energetic intake and mean prey body size for 107 carnivorous mammal species and associated references. Data from Tucker, Ord & Rogers. The Cost of Carnivory Revisited.
DOI: 10.6084/m9.figshare.999062.v6
title: Mammalian Predator-Prey Body-Mass Data

description: <strong>Appendix S1</strong> Database of mean daily energetic expenditure, mean daily energetic intake and mean prey body size for 107 carnivorous mammal species and associated references. Data from Tucker, Ord & Rogers. Revisiting the Cost of Carnivory in Mammals.
DOI: 10.6084/m9.figshare.999062.v5
title: Mammalian Predator-Prey Body-Mass Data

description: <strong>Appendix S1</strong> Database of mean daily energetic expenditure, mean daily energetic intake and mean prey body size for 107 carnivorous mammal species and associated references. Data from Tucker, Ord & Rogers. Revisiting the Cost of Carnivory in Mammals.
DOI: 10.6084/m9.figshare.997770
title: Duarte & Flores 2014

description: Original data from the article entitled "Contrasting shape, colour plasticity and habitat use indicate morph-specific roles in a marine shrimp", submitted to Journal of Animal Ecology. The file uploaded contains (i) basic information of natural distribution of color morphs in algal banks in São Sebastião (Brazil), (ii) population structure, (iii) results from laboratory experiments testing habitat preference and (iv) color change capacity, and, at the end, data testing morph functional roles, including (v) geometric morphometric analysis, (vi) habitat fidelity and (vi) shrimp mobility.
DOI: 10.6084/m9.figshare.997769
title: Anti-Predation data, videos and images

description: movies of D. picta with jumping spiders<br>
DOI: 10.6084/m9.figshare.997770.v2
title: Duarte & Flores 2014

description: Original data from the article entitled "Contrasting shape, colour plasticity and habitat use indicate morph-specific roles in a marine shrimp", submitted to Journal of Animal Ecology. The file uploaded contains (i) basic information of natural distribution of color morphs in algal banks in São Sebastião (Brazil), (ii) population structure, (iii) results from laboratory experiments testing habitat preference and (iv) color change capacity, and, at the end, data testing morph functional roles, including (v) geometric morphometric analysis, (vi) habitat fidelity and (vi) shrimp mobility.
DOI: 10.6084/m9.figshare.997765
title: Gaussian Job Archive for C6H14O4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.997764
title: Gaussian Job Archive for C6H14O4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.997764.v1
title: Gaussian Job Archive for C6H14O4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.997765.v1
title: Gaussian Job Archive for C6H14O4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.997769.v1
title: Anti-Predation data, videos and images

description: movies of D. picta with jumping spiders<br>
DOI: 10.6084/m9.figshare.997770.v1
title: Duarte & Flores 2014

description: Original data from the article entitled "Contrasting shape, colour plasticity and habitat use indicate morph-specific roles in a marine shrimp", submitted to Journal of Animal Ecology. The file uploaded contains (i) basic information of natural distribution of color morphs in algal banks in São Sebastião (Brazil), (ii) population structure, (iii) results from laboratory experiments testing habitat preference and (iv) color change capacity, and, at the end, data testing morph functional roles, including (v) geometric morphometric analysis, (vi) habitat fidelity and (vi) shrimp mobility.
DOI: 10.6084/m9.figshare.997735
title: Gaussian Job Archive for C14H25BrO2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.997736
title: Gaussian Job Archive for C14H25BrO2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.997736.v1
title: Gaussian Job Archive for C14H25BrO2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.997733
title: Queen's University Belfast APC payments for RCUK 2013-14

description: Spreadsheet summary of data concerning the payment of Article Processing Charges for Open Access from the RCUK publication fund at Queen's University Belfast for the year Apr 2013 to Mar 2014. See also Neylon, Cameron (2014): Processed APC Data from QUB using Open Article Gauge. figshare.<br>http://dx.doi.org/10.6084/m9.figshare.999090
DOI: 10.6084/m9.figshare.997734
title: Supplementary material for the paper: "Efficient detection of intra- and interspecific recombination events in the SCMV subgroup of the Potyvirus genus with in silico methods"

description: Supplementary material for the paper: "Efficient detection of intra- and interspecific recombination events in the SCMV subgroup of the Potyvirus genus with in silico methods".
DOI: 10.6084/m9.figshare.997735.v1
title: Gaussian Job Archive for C14H25BrO2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.