cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7929/issda/ybura1
title: Growing Up in Ireland (GUI) Cohort ’98 (Child Cohort) Wave 4 - 20 years, 2019

description: Growing Up in Ireland - the National Longitudinal Study of Children is a landmark study of children and youth which has been running since 2006. The objectives of the study are outlined in a separate publication (Greene et al. 2010). In summary, the project seeks to further our understanding of what it means to be a child or young person growing up in modern Ireland, with a view to informing policy on what both helps and hinders development. A two cohort, cross-sequential longitudinal design was adopted and began with one cohort (Cohort ‘08) of 11,134 infants (aged 9 months) and a second cohort (Cohort ‘98) of 8,568 9-year-olds. Being longitudinal in nature, the same participants are followed over time. The families of Cohort ‘08 have been interviewed when the children were 9 months, 3 years, 5 years and subsequently 9 years of age, while Cohort ’98 and their parents/guardians were interviewed at 9, 13 and 17/18 years of age. This wave of data concerns the Wave 4 interviews of Cohort ‘98 at 20 years of age. As the 20-year-olds are now adults, they are regarded as the main respondents. One parent was also asked to complete questionnaires. All 20-year-olds who were successfully interviewed in the main study at Wave 4 were invited to self-complete the Time-Use Diary. These data have been collected by Growing Up in Ireland, the national longitudinal study of children and young people. The study is funded by Government and the Department of Children, Equality, Disability, Integration and Youth (DCEDIY) is the project sponsor. The study is carried out by the GUI Research Team at DCEDIY, in partnership with the Central Statistics Office (CSO). The Department leads on research aspects of GUI, such as identifying data needs in advance of each wave, and conducting or commissioning policy relevant analyses of available data; and the CSO leads on GUI data collection and the production of statistical outputs. GUI data are collected under the strict confidentiality requirements of the Statistics Act 1993.
DOI: 10.57745/gspcob
title: 210_sigGOterms_p01_geneswithTEinIntron_vs_allCupressusGenes_threshold10.txt

description: Comparison of the functional annotation of genes containing TE with those of the whole Cupressus genome. A total of 210 GO terms were found significantly more frequent in genes containing TE (pvalue &lt; 0.01).
DOI: 10.57745/ywbyyu
title: 215_sigGOterms_p01_geneswith_hATTEinIntron_vs_allCupressusGenes_threshold10.txt

description: Comparison of the functional annotation of genes containing hAT-TE with those of the whole Cupressus genome. A total of 215 GO terms were found significantly more frequent in genes containing hAT-TE (pvalue &lt; 0.01).
DOI: 10.57745/h2qwjb
title: Cleaveland_plot_TOP40_Terpene_GOTerms.R

description: R script to construct theTop 40 GO Terms enrichment scatter plot. The over-representation of GO terms in the genes containing a TE in their intron vs. all the Cs genes was performed with the TopGO R library using the Fisher exact test based on gene count with p-value &lt; 0.01. The GO terms enclosed in green boxes are associated with terpene biosynthesis. The y-axis represents the Top 40 GO Terms found significantly more frequently in genes containing TE compared with the 18,257 Cs genes associated with at least one GO term. The x-axis corresponds to the ratio Significant vs. Expected provided by TopGO. p-value is represented by the color of the dot. The smaller the q-value, the closer the color is to the red color. The number of genes associated with each GO term is represented by the size of the dot.
DOI: 10.57745/dkfhg1
title: 54_cupressus_genes_coords.txt

description: Impact of TE in genes: 54 genes involved in the terpene biosynthesis pathway and associated with enriched GO terms.
DOI: 10.57745/wilgjd
title: get_Violins_for_genes_length_V2.R

description: R script to generate Violin plots showing the distribution of gene lengths for each subset of Cs genes: Terpene genes length distribution (dark grey) is compared with genes with TE in their introns (orange), genes with introns (blue), monoexonic genes (red) and all Cs genes (green). Stars associated with each dataset comparison indicate that the Wilcoxon rank-sum test used for the comparisons is significant (pval &lt;= 0.05 for one star, pval &lt;= 0.001 for three stars and pval &lt;= 0.0001 for four stars). Each violin plot shows a miniature box‐and‐whisker plot giving the median (horizontal line), the upper and lower quartiles (rectangular box), and the extent of gene length distribution (whiskers). The average gene length for each genes set is shown on the X axis (log10 based).
DOI: 10.5281/zenodo.18417446
title: QISHLOQ XO'JALIGIDA ORGANIK MAHSULOTLAR ISHLAB CHIQARISHNING IQTISODIY JIHATLARI: "YASHIL" SERTIFIKATLASH VA EKSPORT IMKONIYATLARI

description: Mazkur tezisda qishloq xo‘jaligida organik mahsulotlar ishlab chiqarishning iqtisodiy ahamiyati, “Yashil” sertifikatlash tizimining afzalliklari hamda organik mahsulotlarni xalqaro bozorlarga eksport qilish imkoniyatlari tahlil qilinadi. Shuningdek, organik ishlab chiqarishni rivojlantirish orqali qishloq xo‘jaligi raqobatbardoshligini oshirish masalalari yoritiladi.
DOI: 10.5281/zenodo.18417447
title: QISHLOQ XO'JALIGIDA ORGANIK MAHSULOTLAR ISHLAB CHIQARISHNING IQTISODIY JIHATLARI: "YASHIL" SERTIFIKATLASH VA EKSPORT IMKONIYATLARI

description: Mazkur tezisda qishloq xo‘jaligida organik mahsulotlar ishlab chiqarishning iqtisodiy ahamiyati, “Yashil” sertifikatlash tizimining afzalliklari hamda organik mahsulotlarni xalqaro bozorlarga eksport qilish imkoniyatlari tahlil qilinadi. Shuningdek, organik ishlab chiqarishni rivojlantirish orqali qishloq xo‘jaligi raqobatbardoshligini oshirish masalalari yoritiladi.
DOI: 10.57745/ra74w8
title: get_Terpene_cluster_info_with_slidingwindows_V6_english.R

description: R script to show the distribution of the 54 genes involved in Terpene synthase pathways along the 11 Cs chromosomes. Each gene is represented by a green bar and red stars are associated with clusters of Terpene genes. The number of genes involved in Terpene synthase pathways is indicated on the right side of each chromosome. The x-axis corresponds to the position of the genes on each chromosome (Mbp).
DOI: 10.57745/dg6vrq
title: Impact of Transposable Elements in introns on the functional annotation of C. sempervirens genes. GO term enrichment analysis.

description: We investigated the impact of TE in genes by comparing their functional annotation with those of the whole Cupressus genome. Among the 42,980 C. sempervirens genes, 18,257 genes are associated with at least one GO term. Among the 18,224 genes with TE in introns, a total of 8,339 genes were associated with at least one GO term. We performed a GO terms enrichment analysis using the topGO R package 2.58.0 with R 4.3.3. We considered the Molecular Function (MF) section of the GO graph structure and we used Fisher's exact statistical test based on gene count to identify the most significant GO terms. GO terms associated with at least 10 genes were kept for the analysis. In total, 210 GO terms were found significantly more frequent in genes containing TE (pvalue &lt; 0.01).
DOI: 10.15468/dl.z72cw2
title: Occurrence Download

description: A dataset containing 1532 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-81.21018 0.60337,-81.09708 -3.91764,-77.08197 -7.12565,-75.10269 -2.50612,-76.45991 0.82955,-81.21018 0.60337))",
 "HasGeospatialIssue is false",
 "TaxonKey is Alouatta palliata",
 "Year 2000-2026"
 ]
}

 The dataset includes 1532 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000203-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aexfcb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Echinorhynchus cestodicola",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000204-260129131611470/datasets/export for details.
DOI: 10.15468/dl.ccu5fz
title: Occurrence Download

description: A dataset containing 4587 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Perca fluviatilis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2025",
 "Year is less than or equal to 2026"
 ]
}

 The dataset includes 4587 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000202-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7929/issda/lqhyke
title: Growing Up in Ireland (GUI) Cohort ’98 (Child Cohort) Wave 3 - 17/18 years, 2016

description: Growing Up in Ireland - the National Longitudinal Study of Children, is the first survey of its kind ever undertaken in Ireland and, as such, aims to explore the many and varied factors that contribute to or undermine the wellbeing of children currently living there. A two age cohort longitudinal design was adopted with one cohort of 11,134 infants (aged nine months) and the other of 8,568 nine-year olds, with a view to improving and understanding of children’s development across a range of domains. Since the survey is longitudinal in nature respondents in both cohorts are interviewed on a number of occasions over the following few years. The 8,568 children representing the nine-year cohort were born between 1st November 1997 and 31st October 1998. The nine year cohort and their parents/guardians were interviewed for a second time at thirteen years of age. Data collection for the second wave at 13 years took place between August 2011 and March 2012 and resulted in a completed datafile of 7,525 cases. Data collection for the third wave at 17/18 years took place between April 2015 and August 2016 and resulted in a completed datafile of 6,216 cases. Data Linkage – Central Applications Office (CAO) data Respondents to Wave 3 were asked for their permission to link to the Central Applications Office (CAO) data on all applications to higher education courses. If the Young Person had already made an application for a higher education course through the CAO, their CAO number was recorded. Those who had not made an application at the time of interview but who were planning to apply in the future were asked for consent to be contacted by the Study Team in April 2017 to record their CAO number at that point. Of the 6,216 respondents in Wave 3, 3,203 (52%) gave permission to access their CAO records and successful linkage was achieved for 3,061 cases (49%). Information on the course codes of up to 10 Level 6/7 courses and up to 10 Level 8 courses chosen by the Young Person; up to 3 course offers received and the course accepted was released from the CAO for those that had consented to the data linkage. To make the data more user-friendly, the Study Team extracted the Higher Education Institute (HEI), the subject area, and the points level (Low / Medium / High / Restricted course), for every choice, offer and acceptance. The rankings of the course offers and the accepted course (first / second / third choice etc.) are also provided, as well as variables indicating the number of level 6/7 courses and the number of level 8 courses chosen. For confidentiality reasons, the AMF only includes information on the total number of choices and offers, the level and ranking of offers and accepted courses.
DOI: 10.15468/dl.psaz8p
title: Occurrence Download

description: A dataset containing 45055250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Netta erythrophthalma, Netta peposaca, Netta rufina, Nettapus auritus, Nettapus coromandelianus, Oxyura ferruginea, Oxyura jamaicensis, Oxyura leucocephala, Oxyura vittata, Plectropterus gambensis, Polysticta stelleri, Pteronetta hartlaubii, Radjah radjah, Sarkidiornis melanotos, Sibirionetta formosa, Spatula clypeata, Spatula cyanoptera, Spatula discors, Spatula hottentota, Spatula platalea, Spatula puna, Spatula rhynchotis, Spatula versicolor, Tadorna cana, Tadorna ferruginea, Tadorna tadornoides, Tadorna variegata, Thalassornis leuconotus, Apteryx australis, Apteryx haastii, Buceros bicornis, Bucorvus abyssinicus, Bucorvus leadbeateri, Bycanistes brevis, Tockus deckeni, Casuarius casuarius, Dromaius novaehollandiae, Actophilornis africanus, Aethia cristatella, Burhinus superciliaris, Charadrius dubius, Chionis albus, Chroicocephalus hartlaubii, Chroicocephalus novaehollandiae, Cursorius cursor, Himantopus himantopus, Himantopus mexicanus, Jacana jacana, Limosa limosa, Pluvianus aegyptius, Scolopax minor, Vanellus armatus, Vanellus chilensis, Vanellus miles, Vanellus spinosus, Anastomus lamelligerus, Ciconia ciconia, Ephippiorhynchus senegalensis, Leptoptilos crumenifer, Leptoptilos crumeniferus, Mycteria ibis, Mycteria leucocephala, Colius striatus, Caloenas nicobarica, Chalcophaps indica, Columba livia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 45055250 records from 5684 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000149-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15545964
title: Dataset for Blockchain Benchmark Reproducibility and Replicability
DOI: 10.5281/zenodo.15599503
title: Dataset for Blockchain Benchmark Reproducibility and Replicability
DOI: 10.15468/dl.nyzczc
title: Occurrence Download

description: A dataset containing 93 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melaleuca glauca Domin"
 ]
}

 The dataset includes 93 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021767-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yaf4b6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oreochromis niloticus (Linnaeus, 1758)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((15.6372 -28.0032,16.2782 -28.5786,20.509 -28.5786,20.509 -24.0715,15.4933 -24.0715,15.4945 -24.1257,16.0509 -25.6631,15.6372 -28.0032))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021768-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.28872971
title: Quantum Entanglement Bridge between Virtual Particle and Anti-Time Domain

description: This OpenQASM 2.0 circuit models the creation of an entanglement bridge between a virtual particle and an anti-time domain representation. The simulation uses a Hadamard gate to prepare the virtual particle in superposition, followed by a controlled-NOT (CNOT) gate to generate a Bell state, establishing maximum quantum entanglement. The final measurements reveal correlations between the virtual particle and the anti-time particle, offering insights into quantum coherence mechanisms across distinct temporal dimensions. This setup provides a foundational model to study entangled interactions between real and anti-temporal quantum systems, essential for exploring alternative theories of cosmological evolution.
DOI: 10.7910/dvn/zz7mao
title: Replication Data for: Support Vector Machine-based Prediction of Pore-forming Toxins (PFT) using Distributed Representation of Reduced Alphabets

description: Curated dataset used for developing sequence-based SVM classifier for predicting pore-forming toxins
DOI: 10.7910/dvn/yc6d3h
title: Replication Data for: FliW2 A Potential Therapeutic Target for Helicobacter pylori

description: The dataset includes the original and supplementary data involved in the paper.
DOI: 10.15468/dl.ftv352
title: Occurrence Download

description: A dataset containing 2416674321 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 2416674321 records from 45927 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002162-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.22010288.v1
title: Pink salmon productivity is driven by catchment hydrogeomorphology and can decline under a changing climate

description: Data used in the manuscript "Pink salmon productivity is driven by catchment hydrogeomorphology and can decline under a changing climate"
DOI: 10.6084/m9.figshare.28952606.v23
title: Logic innovation NEW

description: Logic innovation
DOI: 10.6084/m9.figshare.19073975.v1
title: Antenna_S11_AR_gain(simulation&measurement)

description: Antenna S11 values (simulation and measurement)<br>Antenna axial ratio values at 11.9 GHz, 12.05 GHz, 14.1 GHz and 14.35 GHz at azimuth and elevation planes (simulation and measurement)<br>Antenna gain values at 11.9 GHz, 12.05 GHz, 14.1 GHz and 14.35 GHz at azimuth and elevation planes (simulation and measurement)<br>
DOI: 10.6084/m9.figshare.22336873.v2
title: stem_P_xraymap.rec

description: STEM tomography and X-ray microanalysis of Trypanosoma cruzi showing the phosphorus signal. Gaussian filtered.
DOI: 10.6084/m9.figshare.28070771.v1
title: soure data.zip

description: <b>Efficient Catalytic Degradation and Detoxification of </b><b>6PPD-quinone</b><b> by the Multifunctional Enzyme System of </b><b><i>Phanerochaete chrysosporium</i></b>
DOI: 10.6084/m9.figshare.22741481.v2
title: High-density linkage mapping and genetic dissection of resistance to broomrape (<em>Orobanche crenata</em> Forsk.) in pea (<em>Pisum sativum L.</em>)

description:   
Leaf tissue samples were collected from three individuals of the parental lines and one individual of each RIL. DNA was isolated using the DNeasy Plant Mini Kit (Qiagen) according to the manufacturer’s protocol and checked for quality and concentration using agarose gel (0.8%) electrophoresis and the Qubit 3.0 fluorometer (Life Technologies). A multiplexed <em>Ape</em>KI-GBS library was prepared as described by Elshire et al. (2011) and sequenced by paired-end approach using the Illumina Novoseq 6000 sequencing system (Elshire Group Ltd.). After demultiplexing with the Axe algorithm (Murray and Borevitz, 2018), reads were trimmed for adapter and reverse-barcode sequences using the batch_trim.pl script from github (https://github.com/Lanilen/GBS-PreProcess). Alignment to the <em>Pisum sativum</em> v1.0 reference genome (Kreplak et al. 2019) was performed using bowtie2 (Langmead and Salzberg 2012). After pooling together alignments of the biological replicates of the parental lines, the Stacks pipeline (Catchen et al. 2013) with the biparental filtering mode was used for SNP calling. Further filtering was performed in TASSEL 5.2.31 (Bradbury et al. 2007) by selecting SNP loci showing polymorphism between the parental lines and associated with call rate &gt;90%, minor allele frequency (MAF) &gt;0.25 and heterozygous calls &lt;5%, and maintaining individuals displaying heterozygosity &lt;10%.
DOI: 10.6084/m9.figshare.28089350.v3
title: Dataset for finalized research (GR-2018-12366756)

description: These datasets contain all data for the final report of the finalized research (GR-2018-12366756), titled "Novel determinants and potential therapeutic targets in extraskeletal calcification and ossification: focus on the PTH and FGF23 network".
DOI: 10.6084/m9.figshare.2068509.v3
title: Raw data for table 1 and 2

description: Raw data was used to make table 1 and table 2
DOI: 10.6084/m9.figshare.24566494.v1
title: <b>Long-term soil warming decreases soil microbial necromass carbon by adversely affecting its production and decomposition</b>

description: This dataset is for the article "Long-term soil warming reduces soil microbial necromass carbon by affecting its production and decomposition adversely."
DOI: 10.25381/cput.22211902.v1
title: Solar still components temperature and weather condition

description: The weather elements were monitored by the weather station mounted at the top of the Mechanical Engineering building. Both solar stills temperature (conventional/ developed) were monitored using set of thermocouples connected to the datalogger. Ethical reference number (2019FEREC-STD-03)
DOI: 10.6084/m9.figshare.17040431.v1
title: Supplementary Material for: Frequent Placental SARS-CoV-2 in Patients with COVID-19-Associated Hypertensive Disorders of Pregnancy

description: <b><i>Introduction:</i></b> Studies described an increased frequency of hypertensive disorders of pregnancy (HDP) after a COVID-19 episode. There is limited evidence about SARS-CoV-2 viral load in placenta. This study aimed to investigate the relationship between SARS-CoV-2 viral load in the placenta and clinical development of HDP after COVID-19 throughout different periods of gestation. <b><i>Methods:</i></b> This is a case-control study in women with and without gestational hypertensive disorders after SARS-CoV-2 infection diagnosed by RT-PCR during pregnancy. Patients were matched by gestational age at the moment of COVID-19 diagnosis. We performed an analysis of SARS-CoV-2 RNA levels in placenta. <b><i>Results:</i></b> A total of 28 women were enrolled. Sixteen patients were diagnosed with COVID-19 during the third trimester and the remaining 12 patients in the other trimesters. Ten placentas (35.7%) were positive for SARS-CoV-2, 9 of them (9/14, 64.3%) belonged to the HDP group versus 1 (1/14, 7.2%) in the control group (<i>p</i> = 0.009). Those cases with the highest loads of viral RNA developed severe preeclampsia (PE). <b><i>Conclusion:</i></b> Among women diagnosed with COVID-19 during pregnancy, the presence of SARS-CoV-2 in the placenta was more frequent among women suffering from PE or gestational hypertension. Furthermore, the most severe cases of HDP were associated with high placental viral load, not necessarily associated with a positive nasopharyngeal RT-PCR at delivery. Our data suggest that SARS-CoV-2 infection during pregnancy could trigger gestational hypertensive disorders through persistent placental infection and resulting placental damage.
DOI: 10.6084/m9.figshare.24985986.v1
title: 1874-draft(2)_31_12_23-Excel.xlsx

description: This paper is the first to propose an aggregate S-trend factor production function to estimate total factor productivity (TFP) and investment efficiency in an economy. This function implements Charles R. Hulten's organizing principle: to what extent the growth of the economy is due to an increase in "productivity" (progress in technology and organization of production) and to what extent to "capital formation" (increased investment in human capital, knowledge and fixed capital). Estimation of future members of the series is usually done by a forecast model. It is a model that approximates a trend. The Verhulst's S-curve is used as the approximation function. By aggregate S-trend production function we mean a two factor production function It represents the growth of the economy, which is by raw data and takes into account all influencing factors, and is certainly broader than the concept of " capital formation ",is a total factor productivity TFP. The error of approximation is quantitatively measured by the MAPE criterion.