cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6084362.v1
title: MOESM4 of Simulation models predict that school-age children are responsible for most human-to-mosquito Plasmodium falciparum transmission in southern Malawi

description: Additional file 4. Dry season model equations. Files for use with Berkeley Madonna modelling software that include model equations and dry season parameter estimates from this paper.
DOI: 10.6084/m9.figshare.6084377
title: MOESM5 of Simulation models predict that school-age children are responsible for most human-to-mosquito Plasmodium falciparum transmission in southern Malawi

description: Additional file 5. Rainy season model equations. Files for use with Berkeley Madonna modelling software that include model equations and rainy season parameter estimates from this paper.
DOI: 10.6084/m9.figshare.6084377.v1
title: MOESM5 of Simulation models predict that school-age children are responsible for most human-to-mosquito Plasmodium falciparum transmission in southern Malawi

description: Additional file 5. Rainy season model equations. Files for use with Berkeley Madonna modelling software that include model equations and rainy season parameter estimates from this paper.
DOI: 10.6084/m9.figshare.6084491
title: Additional file 1: of Methylated genomic loci encoding microRNA as a biomarker panel in tissue and saliva for head and neck squamous cell carcinoma

description: Figure S1. Flow chart of mgmiRs search for HNSCC. Figure S2. Screening of mgmiR in HNSCC using HNSCC and control cell lines. Relative methylation level of the mgmiRs examined by qMS-PCR in 12 HNSCC cell lines (HNSCC) and 4 head and neck control cell lines (Normal). Red frames highlight mgmiRs with significance difference between HNSCCs and normal (p &lt; 0.05). Figure S3. Selection of mgmiR in HNSCC using HNSCC and control tissues. Relative methylation level of the mgmiRs examined by qMS-PCR in 30 HNSCC tissues (HNSCC) and 25 control tissues (Normal). Red frames highlight mgmiRs with significance difference between HNSCCs and normal (p &lt; 0.05). Figure S4. ROC curves using continuous variables for HNSCC detection. (A). ROC curves comparing the seven mgmiRs with the largest areas under the curve for tissues. (B). ROC curves comparing the seven mgmiRs with the largest areas under the curve for saliva. Figure S5. Variable importance plot from the Random Forest analysis for tissue data including (A) or excluding (B) demographic information. Figure S6. Variable importance plot from the Random Forest analysis for saliva data including (A) or excluding (B) demographic information. (ZIP 509 kb)
DOI: 10.6084/m9.figshare.6084491.v1
title: Additional file 1: of Methylated genomic loci encoding microRNA as a biomarker panel in tissue and saliva for head and neck squamous cell carcinoma

description: Figure S1. Flow chart of mgmiRs search for HNSCC. Figure S2. Screening of mgmiR in HNSCC using HNSCC and control cell lines. Relative methylation level of the mgmiRs examined by qMS-PCR in 12 HNSCC cell lines (HNSCC) and 4 head and neck control cell lines (Normal). Red frames highlight mgmiRs with significance difference between HNSCCs and normal (p &lt; 0.05). Figure S3. Selection of mgmiR in HNSCC using HNSCC and control tissues. Relative methylation level of the mgmiRs examined by qMS-PCR in 30 HNSCC tissues (HNSCC) and 25 control tissues (Normal). Red frames highlight mgmiRs with significance difference between HNSCCs and normal (p &lt; 0.05). Figure S4. ROC curves using continuous variables for HNSCC detection. (A). ROC curves comparing the seven mgmiRs with the largest areas under the curve for tissues. (B). ROC curves comparing the seven mgmiRs with the largest areas under the curve for saliva. Figure S5. Variable importance plot from the Random Forest analysis for tissue data including (A) or excluding (B) demographic information. Figure S6. Variable importance plot from the Random Forest analysis for saliva data including (A) or excluding (B) demographic information. (ZIP 509 kb)
DOI: 10.6084/m9.figshare.10271537.v2
title: exp 1 (japan data) 'emotional faces and biological motion study'

description: raw data obtained from japan for experiment 1. The demographic spreadsheet is included.
DOI: 10.6084/m9.figshare.10271549.v1
title: exp 2 (japan data)

description: raw data obtained from japan for experiment 2. The demographic spreadsheet is included.
DOI: 10.6084/m9.figshare.10271537.v1
title: exp 1 (japan data)

description: raw data obtained from japan for experiment 1. The demographic spreadsheet is included.
DOI: 10.6084/m9.figshare.10271489
title: Vincent_AnnexeA_globalNetwork.txt

description: The global Tara Oceans Interactome as published in Lima-Mendez et al. 2015 10.1126/science.1262073<br>
DOI: 10.6084/m9.figshare.10271489.v1
title: Vincent_AnnexeA_globalNetwork.txt

description: The global Tara Oceans Interactome as published in Lima-Mendez et al. 2015 10.1126/science.1262073<br>
DOI: 10.6084/m9.figshare.10271447
title: projected GPP data

description: The dataset includes the projected GPP data under RCP4.5 and RCP8.5.
DOI: 10.6084/m9.figshare.10271432
title: Analytics for paper published in The Conversation ''Des vers géants prédateurs ...'' May 2018.pdf

description: <b>These are the Analytics</b> (May 2018 - November 2019) for a paper published in The Conversation:“Des vers géants prédateurs envahissent les jardins français. Dans l’indifférence”.Published May 22, 2018 in the Conversation.<br>The paper itself is available at:<br>Justine, Jean-Lou (2018): Des vers géants prédateurs envahissent les jardins français. Dans l’indifférence. figshare. Journal contribution. https://doi.org/10.6084/m9.figshare.6369026.v1<br>
DOI: 10.6084/m9.figshare.10271447.v1
title: projected GPP data

description: The dataset includes the projected GPP data under RCP4.5 and RCP8.5.
DOI: 10.6084/m9.figshare.10271432.v1
title: Analytics for paper published in The Conversation ''Des vers géants prédateurs ...'' May 2018.pdf

description: <b>These are the Analytics</b> (May 2018 - November 2019) for a paper published in The Conversation:“Des vers géants prédateurs envahissent les jardins français. Dans l’indifférence”.Published May 22, 2018 in the Conversation.<br>The paper itself is available at:<br>Justine, Jean-Lou (2018): Des vers géants prédateurs envahissent les jardins français. Dans l’indifférence. figshare. Journal contribution. https://doi.org/10.6084/m9.figshare.6369026.v1<br>
DOI: 10.25345/c5qb40
title: MassIVE MSV000086020 - Human neutrophil glycoproteomics
title: In-depth proteomics and glycoproteomics investigation of pooled neutrophils from healthy donors.
DOI: 10.6084/m9.figshare.10271318
title: Gene database for Pseudomonas aeruginosa PAO1

description: <i>Pseudomonas aeruginosa </i>is a common soil bacterium with a versatile metabolism capable of degrading many organic compounds. More importantly, <i>P. aeruginosa </i>is recognized as an important opportunistic pathogen of humans. This contribution describes a gene database comprising the names and gene sequences of all genes in <i>Pseudomonas aeruginosa</i> PAO1 (Genbank accession number: NCBI Reference Sequence: NC_002516.2). Annotated genome file was downloaded from Genbank and parsed by an in-house MATLAB software to yield a database comprising gene names and gene sequences. Overall, the gene database of <i>P. aeruginosa </i>PAO1 should find use in applications investigating the multi-faceted biology and biotechnology applications of this Gram-negative bacterium. Note that many genes in the species remain unannotated and lack a three letter abbreviated gene name. <br><br>
DOI: 10.6084/m9.figshare.10271303
title: Warning signals promote morphological diversification in fossorial uropeltid snakes (Squamata: Uropeltidae)

description: Dataset containing a time tree of 24 species of Uropeltis along with a file containing the average measurements of 17 morphological variables and the overall conspicuousness score for the respective 24 Uropeltis species.
DOI: 10.6084/m9.figshare.10271303.v1
title: Warning signals promote morphological diversification in fossorial uropeltid snakes (Squamata: Uropeltidae)

description: Dataset containing a time tree of 24 species of Uropeltis along with a file containing the average measurements of 17 morphological variables and the overall conspicuousness score for the respective 24 Uropeltis species.
DOI: 10.6084/m9.figshare.10270982
title: MOESM1 of The microbiome of the upper respiratory tract in health and disease

description: Additional file 1. Summary of the URT microbiome during the process of aging and in health and disease (collated information from selected studies).
DOI: 10.6084/m9.figshare.10270982.v1
title: MOESM1 of The microbiome of the upper respiratory tract in health and disease

description: Additional file 1. Summary of the URT microbiome during the process of aging and in health and disease (collated information from selected studies).
DOI: 10.6084/m9.figshare.10270976
title: MOESM1 of A meta-analysis on genetic variability of RT/HBsAg overlapping region of hepatitis B virus (HBV) isolates of Bangladesh

description: Additional file 1. List of accession numbers of the sequences downloaded from NCBI GenBank and used for analysis in this study. The HBsAg escape and drug-resistant mutational analysis were performed using Geno2pheno-HBV and HIV-Grade:HBV-Tool.
DOI: 10.6084/m9.figshare.10270976.v1
title: MOESM1 of A meta-analysis on genetic variability of RT/HBsAg overlapping region of hepatitis B virus (HBV) isolates of Bangladesh

description: Additional file 1. List of accession numbers of the sequences downloaded from NCBI GenBank and used for analysis in this study. The HBsAg escape and drug-resistant mutational analysis were performed using Geno2pheno-HBV and HIV-Grade:HBV-Tool.
DOI: 10.6084/m9.figshare.10270922
title: MOESM3 of A multiple classifier system identifies novel cannabinoid CB2 receptor ligands

description: Additional file 3. List of potential candidates sorted by probability of being Active.
DOI: 10.6084/m9.figshare.10270922.v1
title: MOESM3 of A multiple classifier system identifies novel cannabinoid CB2 receptor ligands

description: Additional file 3. List of potential candidates sorted by probability of being Active.
DOI: 10.6084/m9.figshare.10270913
title: MOESM2 of A multiple classifier system identifies novel cannabinoid CB2 receptor ligands

description: Additional file 2. Performance comparison of Simple ML models and D2-MCS.
DOI: 10.6084/m9.figshare.10270913.v1
title: MOESM2 of A multiple classifier system identifies novel cannabinoid CB2 receptor ligands

description: Additional file 2. Performance comparison of Simple ML models and D2-MCS.
DOI: 10.6084/m9.figshare.10270883
title: MOESM4 of Organ transcriptomes of the lucinid clam Loripes orbiculatus (Poli, 1791) provide insights into their specialised roles in the biology of a chemosymbiotic bivalve

description: Additional file 4. GO term enrichments â€“ Results of the gene ontology term enrichment analyses of genes highly expressed in each organ
DOI: 10.6084/m9.figshare.10270874
title: MOESM2 of Organ transcriptomes of the lucinid clam Loripes orbiculatus (Poli, 1791) provide insights into their specialised roles in the biology of a chemosymbiotic bivalve

description: Additional file 2. Genes involved in immunity â€“ Tables summarising the genes putatively involved in L. orbiculatus immunity
DOI: 10.6084/m9.figshare.10270883.v1
title: MOESM4 of Organ transcriptomes of the lucinid clam Loripes orbiculatus (Poli, 1791) provide insights into their specialised roles in the biology of a chemosymbiotic bivalve

description: Additional file 4. GO term enrichments â€“ Results of the gene ontology term enrichment analyses of genes highly expressed in each organ
DOI: 10.6084/m9.figshare.10270877
title: MOESM3 of Organ transcriptomes of the lucinid clam Loripes orbiculatus (Poli, 1791) provide insights into their specialised roles in the biology of a chemosymbiotic bivalve

description: Additional file 3. Differentially expressed genes lists â€“ Lists of genes differentially expressed in pairwise comparisons of the four organs analysed in this study
DOI: 10.6084/m9.figshare.10270865
title: MOESM1 of Organ transcriptomes of the lucinid clam Loripes orbiculatus (Poli, 1791) provide insights into their specialised roles in the biology of a chemosymbiotic bivalve

description: Additional file 1. Assembly statistics â€“ Assembly statistics for reference transcriptome
DOI: 10.6084/m9.figshare.10270874.v1
title: MOESM2 of Organ transcriptomes of the lucinid clam Loripes orbiculatus (Poli, 1791) provide insights into their specialised roles in the biology of a chemosymbiotic bivalve

description: Additional file 2. Genes involved in immunity â€“ Tables summarising the genes putatively involved in L. orbiculatus immunity
DOI: 10.6084/m9.figshare.10270877.v1
title: MOESM3 of Organ transcriptomes of the lucinid clam Loripes orbiculatus (Poli, 1791) provide insights into their specialised roles in the biology of a chemosymbiotic bivalve

description: Additional file 3. Differentially expressed genes lists â€“ Lists of genes differentially expressed in pairwise comparisons of the four organs analysed in this study
DOI: 10.6084/m9.figshare.10270865.v1
title: MOESM1 of Organ transcriptomes of the lucinid clam Loripes orbiculatus (Poli, 1791) provide insights into their specialised roles in the biology of a chemosymbiotic bivalve

description: Additional file 1. Assembly statistics â€“ Assembly statistics for reference transcriptome
DOI: 10.6084/m9.figshare.10270760
title: MOESM5 of Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling

description: Additional file 5: Table S4. This file contains Table S4: Fungal indicator taxa.
DOI: 10.6084/m9.figshare.10270763
title: MOESM6 of Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling

description: Additional file 6: Table S5. This file contains Table S5: Hub taxa.
DOI: 10.6084/m9.figshare.10270763.v1
title: MOESM6 of Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling

description: Additional file 6: Table S5. This file contains Table S5: Hub taxa.
DOI: 10.6084/m9.figshare.10270751
title: MOESM1 of Integrative analysis of transcriptomic data related to the liver of laying hens: from physiological basics to newly identified functions

description: Additional file 1. Gene annotation of published data [11] based on current chicken genome databases (GRCg6a (GCA_000002315.5) assembly, submitted by the Genome Reference Consortium on April 2018).
DOI: 10.6084/m9.figshare.10270754
title: MOESM4 of Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling

description: Additional file 4: Table S3. This file contains Table S3: Bacterial indicator taxa.
DOI: 10.6084/m9.figshare.10270757
title: MOESM2 of Integrative analysis of transcriptomic data related to the liver of laying hens: from physiological basics to newly identified functions

description: Additional file 2. Integrative analysis of overexpressed gene in the liver of laying hens.
DOI: 10.6084/m9.figshare.10270760.v1
title: MOESM5 of Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling

description: Additional file 5: Table S4. This file contains Table S4: Fungal indicator taxa.
DOI: 10.6084/m9.figshare.10270751.v1
title: MOESM1 of Integrative analysis of transcriptomic data related to the liver of laying hens: from physiological basics to newly identified functions

description: Additional file 1. Gene annotation of published data [11] based on current chicken genome databases (GRCg6a (GCA_000002315.5) assembly, submitted by the Genome Reference Consortium on April 2018).
DOI: 10.6084/m9.figshare.10270757.v1
title: MOESM2 of Integrative analysis of transcriptomic data related to the liver of laying hens: from physiological basics to newly identified functions

description: Additional file 2. Integrative analysis of overexpressed gene in the liver of laying hens.
DOI: 10.6084/m9.figshare.10270754.v1
title: MOESM4 of Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling

description: Additional file 4: Table S3. This file contains Table S3: Bacterial indicator taxa.
DOI: 10.6084/m9.figshare.10270742
title: MOESM1 of Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling

description: Additional file 1. Raw data from qPCR analysis. This file contains Fluidigm output data for all samples (“Sample ID” column contains abbreviations as used in this manuscript, with biological replicate number following the abbreviation). Twelve technical replicates were prepared for each sample, but only samples that passed the quality control check (see “Call” column) were included in calculations.
DOI: 10.6084/m9.figshare.10270742.v1
title: MOESM1 of Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling

description: Additional file 1. Raw data from qPCR analysis. This file contains Fluidigm output data for all samples (“Sample ID” column contains abbreviations as used in this manuscript, with biological replicate number following the abbreviation). Twelve technical replicates were prepared for each sample, but only samples that passed the quality control check (see “Call” column) were included in calculations.
DOI: 10.6084/m9.figshare.10270706
title: MOESM2 of Implementation and scale-up of physical activity and behavioural nutrition interventions: an evaluation roadmap

description: Additional file 2. Interactive spreadsheet provided to participants in round 2 of the Delphi process.
DOI: 10.6084/m9.figshare.10270706.v1
title: MOESM2 of Implementation and scale-up of physical activity and behavioural nutrition interventions: an evaluation roadmap

description: Additional file 2. Interactive spreadsheet provided to participants in round 2 of the Delphi process.
DOI: 10.6084/m9.figshare.10270643
title: MOESM1 of Signet ring cell variant of follicular thyroid carcinoma: Report of two cases with focus on morphological, expressional and genetic characteristics

description: Additional file 1: Table S1. In silico prediction of transcription factor (TF) binding site alterations based on the PTEN intronic mutation c.209 + 11 T &gt; G in case 2 (XLSX 25 kb)
DOI: 10.6084/m9.figshare.10270643.v1
title: MOESM1 of Signet ring cell variant of follicular thyroid carcinoma: Report of two cases with focus on morphological, expressional and genetic characteristics

description: Additional file 1: Table S1. In silico prediction of transcription factor (TF) binding site alterations based on the PTEN intronic mutation c.209 + 11 T &gt; G in case 2 (XLSX 25 kb)
DOI: 10.6084/m9.figshare.10270622
title: MOESM1 of The neurogenomic transition from territory establishment to parenting in a territorial female songbird

description: Additional file 1: Table S1. Differentially expressed genes between territory establishment and incubation in the ventromedial telencephalon(VmT),hypothalamus(HYPO), and hindbrain(HB). Table S2. Old change were analyzed . The most specific terms with significant effects(Fisher’s adjusted p 3 genes are reported. Ont = Ontology (BP = Biological Process; CC = Cellular Component.Table S3. List of the candidate aggression-related genes detected in our dataset. The list of relevant pathways was obtained from the literature (Nelson,2005;Filby et al.,2010) and functions are from GeneCards (https://www.genecards.org)Table S4. RNA-Seq mapping statics, including total read pairs from the sequencer, total read pairs after trimming, total read pairs mapped(both reads in the pair mapped to the same manuscript),and percentage mapped.
DOI: 10.6084/m9.figshare.10270622.v1
title: MOESM1 of The neurogenomic transition from territory establishment to parenting in a territorial female songbird

description: Additional file 1: Table S1. Differentially expressed genes between territory establishment and incubation in the ventromedial telencephalon(VmT),hypothalamus(HYPO), and hindbrain(HB). Table S2. Old change were analyzed . The most specific terms with significant effects(Fisher’s adjusted p 3 genes are reported. Ont = Ontology (BP = Biological Process; CC = Cellular Component.Table S3. List of the candidate aggression-related genes detected in our dataset. The list of relevant pathways was obtained from the literature (Nelson,2005;Filby et al.,2010) and functions are from GeneCards (https://www.genecards.org)Table S4. RNA-Seq mapping statics, including total read pairs from the sequencer, total read pairs after trimming, total read pairs mapped(both reads in the pair mapped to the same manuscript),and percentage mapped.
DOI: 10.6084/m9.figshare.10270601
title: MOESM28 of Microbiome of vineyard soils is shaped by geography and management

description: Additional file 28: Table S15. Taxa significantly correlated with chemical and physical characteristics of the soil from 16S data and ITS data. (XLSX 654 kb)
DOI: 10.6084/m9.figshare.10270601.v1
title: MOESM28 of Microbiome of vineyard soils is shaped by geography and management

description: Additional file 28: Table S15. Taxa significantly correlated with chemical and physical characteristics of the soil from 16S data and ITS data. (XLSX 654 kb)
DOI: 10.6084/m9.figshare.10270517
title: MOESM16 of Microbiome of vineyard soils is shaped by geography and management

description: Additional file 16: Table S3. Results of the Deseq analysis of fungal taxa significantly differentially abundant in vineyard vs permanent grassland (P1 and P2 are considered together) samples for ITS data. (XLSX 22 kb)
DOI: 10.6084/m9.figshare.10270517.v1
title: MOESM16 of Microbiome of vineyard soils is shaped by geography and management

description: Additional file 16: Table S3. Results of the Deseq analysis of fungal taxa significantly differentially abundant in vineyard vs permanent grassland (P1 and P2 are considered together) samples for ITS data. (XLSX 22 kb)
DOI: 10.6084/m9.figshare.10270508
title: MOESM15 of Microbiome of vineyard soils is shaped by geography and management

description: Additional file 15: Table S2. Results of the Deseq analysis of bacterial taxa significantly differentially abundant in vineyard vs permanent grassland (P1 and P2 are considered together) samples for 16S data. (XLSX 53 kb)
DOI: 10.6084/m9.figshare.10270508.v1
title: MOESM15 of Microbiome of vineyard soils is shaped by geography and management

description: Additional file 15: Table S2. Results of the Deseq analysis of bacterial taxa significantly differentially abundant in vineyard vs permanent grassland (P1 and P2 are considered together) samples for 16S data. (XLSX 53 kb)
DOI: 10.6084/m9.figshare.10270391
title: MOESM5 of Microbial communities of the house fly Musca domestica vary with geographical location and habitat

description: Additional file 5: Table S5. Sequencing primers.
DOI: 10.6084/m9.figshare.10270391.v1
title: MOESM5 of Microbial communities of the house fly Musca domestica vary with geographical location and habitat

description: Additional file 5: Table S5. Sequencing primers.
DOI: 10.6084/m9.figshare.10270382
title: MOESM4 of Microbial communities of the house fly Musca domestica vary with geographical location and habitat

description: Additional file 4: Table S4. Metadata of the samples..
DOI: 10.6084/m9.figshare.10270370
title: MOESM2 of Microbial communities of the house fly Musca domestica vary with geographical location and habitat

description: Additional file 2: Table S1. Overview of sampling success rate.
DOI: 10.6084/m9.figshare.10270382.v1
title: MOESM4 of Microbial communities of the house fly Musca domestica vary with geographical location and habitat

description: Additional file 4: Table S4. Metadata of the samples..