cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.t9prub
title: Occurrence Download

description: A dataset containing 74 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Carex decomposita Muhl.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 74 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0163663-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hl2ix2
title: Occurrence Download

description: A dataset containing 232869 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Syngonanthus cuyabensis (Bong.) Giul., Hensold & L.R.Parra",
 "TaxonKey is Syngonanthus caulescens (Poir.) Ruhland",
 "TaxonKey is Stuckenia striata (Ruiz & Pav.) Holub",
 "TaxonKey is Stuckenia pectinata (L.) Börner",
 "TaxonKey is Spirodela polyrhiza (L.) Schleid.",
 "TaxonKey is Sphenoclea zeylanica Gaertn.",
 "TaxonKey is Setaria parviflora (Poir.) Kerguélen",
 "TaxonKey is Sesbania exasperata Kunth",
 "TaxonKey is Scleria lacustris C.Wright",
 "TaxonKey is Scleria gaertneri Raddi",
 "TaxonKey is Schoenoplectus californicus (C.A.Mey.) Soják",
 "TaxonKey is Salvinia minima Baker",
 "TaxonKey is Salvinia biloba Raddi",
 "TaxonKey is Salvinia auriculata Aubl.",
 "TaxonKey is Sagittaria rhombifolia Cham.",
 "TaxonKey is Sagittaria montevidensis Cham. & Schltdl.",
 "TaxonKey is Sacciolepis vilvoides (Trin.) Chase",
 "TaxonKey is Sacciolepis myuros (Lam.) Chase",
 "TaxonKey is Rotala ramosior (L.) Koehne",
 "TaxonKey is Rotala mexicana Cham. & Schltdl.",
 "TaxonKey is Rhynchospora velutina (Kunth) Boeckeler",
 "TaxonKey is Rhynchospora trispicata (Nees) Schrad. ex Steud.",
 "TaxonKey is Rhynchospora riparia (Nees) Boeckeler",
 "TaxonKey is Rhynchospora nervosa (Vahl) Boeckeler",
 "TaxonKey is Rhynchospora holoschoenoides (Rich.) Herter",
 "TaxonKey is Rhynchospora hassleri C.B.Clarke",
 "TaxonKey is Rhynchospora corymbosa (L.) Britton",
 "TaxonKey is Ranunculus bonariensis Poir."
 ]
}

 The dataset includes 232869 records from 796 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027508-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zbbrgy
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Vallicoccus soli"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013282-250402121839773/datasets/export for details.
DOI: 10.48597/5dum-wjhn
title: Measurement of Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.48597/me22-2p3r
title: Measurement of Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.48597/5vgn-jqk2
title: Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.48597/7r2x-ejtr
title: Measurement of Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.48597/b5dn-68p6
title: Measurement of Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.48597/eexy-7kdf
title: Measurement of Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.48597/fmgc-ufd2
title: Measurement of Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.48597/pbya-75uh
title: Measurement of Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.48597/3jfa-trma
title: Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.48597/c243-bexv
title: Measurement of Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.48597/wxbe-53qx
title: Measurement of Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.48597/jape-8t7t
title: Measurement of Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.48597/ngas-djp2
title: Measurement of Heavy metals at Peyrusse Vieille

description: Measurement of Heavy metals at Peyrusse Vieille
DOI: 10.6084/m9.figshare.c.3639878_d2.v1
title: Additional file 3: of Integration of metabolomics, lipidomics and clinical data using a machine learning method

description: List of lipidomics, metabolomics and clinical chemistry data set. (XLSX 897 kb)
DOI: 10.6084/m9.figshare.c.3639878_d5.v1
title: Additional file 4: of Integration of metabolomics, lipidomics and clinical data using a machine learning method

description: The R- Scripts used in the analysis. (TXT 4 kb)
DOI: 10.6084/m9.figshare.c.3639896_d1.v1
title: Additional file 1: of Bracing in adult with scoliosis: experience in diagnosis and classification from a 15 year prospective study of 739 patients

description: Excel spreadsheet: Spreadsheet used for the diagnostic comparison of average according to the age and angulation. (XLSX 80 kb)
DOI: 10.6084/m9.figshare.c.3640379_d1.v1
title: Additional file 2: of Varicella-zoster virus susceptibility and primary healthcare consultations in Norway

description: Model fitting information (Likelihood ratios and 95Â % confidence intervals (CI)). (S: Sex; R: region; A: age groups. Df: the number of parameters that differ between the two nested models; AIC: Akaike information criterion). (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3640379_d2.v1
title: Additional file 1: of Varicella-zoster virus susceptibility and primary healthcare consultations in Norway

description: Univariate and multivariable analysis of varicella-zoster virus seropositivity by sex (reference: female), age group and region (reference: Oslo and Akershus) in Norway (odds ratios (OR), 95Â % confidence intervals (95Â % CI), and p-value). (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3640388_d1.v1
title: Additional file 3: Table S3. of Application of targeted multi-gene panel testing for the diagnosis of inherited peripheral neuropathy provides a high diagnostic yield with unexpected phenotype-genotype variability

description: Variants of Unknown Clinical Significance (Class 3)Â (XLSX 33Â kb)
DOI: 10.6084/m9.figshare.c.3640388_d2.v1
title: Additional file 1: Table S1. of Application of targeted multi-gene panel testing for the diagnosis of inherited peripheral neuropathy provides a high diagnostic yield with unexpected phenotype-genotype variability

description: Clearly Pathogenic Variants (Class 5) (XLSX 18Â kb)
DOI: 10.6084/m9.figshare.c.3640388_d3.v1
title: Additional file 2: Table S2. of Application of targeted multi-gene panel testing for the diagnosis of inherited peripheral neuropathy provides a high diagnostic yield with unexpected phenotype-genotype variability

description: Likely Pathogenic Variants (Class 4) (XLSX 20Â kb)
DOI: 10.6084/m9.figshare.c.3640394_d3.v1
title: Additional file 3: of Whole genome SNP typing to investigate methicillin-resistant Staphylococcus aureus carriage in a health-care provider as the source of multiple surgical site infections

description: Table S3. Antibiotic resistance gene profiles from WGS data using SRST2 and the ARGannot database. Genes marked with (*) indicate non-precise matches and (?) indicates uncertainty due to coverage. A (â   ) indicates the gene was absent. Different antibiotic classes are abbreviated as AGly: aminoglycosides, Bla: beta-lactamases, Fos: fosfomycin, Flq: fluoroquinolones, Gly: glycopeptides, MLS: macrolide-lincosamide-streptogramin, Phe: phenicols, and Tet: tetracyclines. (XLS 39Â kb)
DOI: 10.6084/m9.figshare.c.3640409_d2.v1
title: Additional file 5: Table S4. of Transcriptomes of newly-isolated Trypanosoma brucei rhodesiense reveal hundreds of mRNAs that are co-regulated with stumpy-form markers

description: Transcriptome analysis using DESeq. Sheet 1: Using only the unique gene set, transcriptomes from different isolates were compared pair-wise using DESeq. We show only the fold change and the adjusted P-values. Background colours are used only to make the pairs clear. Sheet 2: mRNAs that are most specifically increased in the LW032 and LW042 trasncriptomes relative to cBS, BT, and PC. Only genes with with adjusted P-values of less than 0.01 were considered. Of these, at least one isolate (either 42 or 32) had to show a 3-fold increase relative to cultured bloodstream forms, and the remainder of the ratios had to be at least 2× cBS or BT. B42 or 32 also had to be at least 2-fold procyclics. Comparisons with other datasets in this and subsequent sheets are indicated as follows: ST/SL Kabani; stumpy/slender ratio from [6]; ST/SL BS Jensen -stumpy/slender ratio from [7]; SLvST mRNA Capewell and ST polysomes/mRNA Capewell - data from [13]; SG/cBS: salivary gland trypanosomes relative to cultured bloodstream forms from [30]; SG/PC: salivary gland trypanosomes [30] relative to our results for cultured Lister 427 procyclic forms: cell cycle peak and amplitude: data from [31]. RITSeq: data from [28]. Sheet 3: mRNAs increased in procyclics as well as in LW032 and LW042. As for sheet 2 except that results for B42 and B32 had to be more than 0.5× the procyclic value. Sheet 4: mRNAs decreased at least two-fold in LW032 and LW042 relative to procyclics and bloodstream forms. Calculations similar to sheet 2. Sheet 5: mRNAs that were at least 3-fold higher in cBS relative to the other conditions. Sheet 6: mRNAs that were low in all parasites isolated from blood (down in BT as well as the recent isolates). (XLSX 4058 kb)
DOI: 10.6084/m9.figshare.c.3640409_d4.v1
title: Additional file 3: Table S2. of Transcriptomes of newly-isolated Trypanosoma brucei rhodesiense reveal hundreds of mRNAs that are co-regulated with stumpy-form markers

description: SNPs and indels for the new isolates. The first sheet is a summary, the others are as labelled on the tabs. (XLSX 12654 kb)
DOI: 10.6084/m9.figshare.c.3640409_d3.v1
title: Additional file 2: Table S1. of Transcriptomes of newly-isolated Trypanosoma brucei rhodesiense reveal hundreds of mRNAs that are co-regulated with stumpy-form markers

description: Calculated gene copy numbers. Sheet 1: RPKM counts for all genes, modal values and calculated gene copy numbers. Sheet 2 Calculated gene copy numbers (RPKM divided by modal RPKM) for the unique gene list [39]. (XLS 3352 kb)
DOI: 10.6084/m9.figshare.c.3640817_d6.v1
title: MOESM7 of Construction of a large collection of small genome variations in French dairy and beef breeds using whole-genome sequences

description: Additional file 7. Results of GO enrichment. GO enrichment analyses were performed using the MouseMine analysis tools and the results are summarized in sheets 1 and 2. Mammalian phenotype enrichment results are in sheet 1 and GO enrichment results in sheet 2.
DOI: 10.6084/m9.figshare.c.3640817_d7.v1
title: MOESM2 of Construction of a large collection of small genome variations in French dairy and beef breeds using whole-genome sequences

description: Additional file 2. Size distribution of small insertions and deletions identified by GATK. Total number of small insertions and deletions and their distribution by size are indicated.
DOI: 10.6084/m9.figshare.c.3640826_d1.v1
title: Additional file 6: Table S5. of Medical implications of technical accuracy in genome sequencing

description: Multiple annotations with transcript evidence for five variants in ACMG genes detected in the NA12878 consensus standard dataset. (XLSX 39 kb)
DOI: 10.6084/m9.figshare.c.3640826_d3.v1
title: Additional file 4: Table S3. of Medical implications of technical accuracy in genome sequencing

description: Sites with systematic errors prior to filtering that are present in ClinVar. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.c.3640826_d4.v1
title: Additional file 2: Table S2. of Medical implications of technical accuracy in genome sequencing

description: The impact of filters on false positive and true positives in the high-confidence regions of the whole genome for Platypus WGS. (XLSX 52 kb)
DOI: 10.6084/m9.figshare.c.3640826_d5.v1
title: Additional file 5: Table S4. of Medical implications of technical accuracy in genome sequencing

description: A listing of pathogenic variants from ClinVar present in ExAC. (TXT 602 kb)
DOI: 10.6084/m9.figshare.c.3640826_d6.v1
title: Additional file 1: Table S1. of Medical implications of technical accuracy in genome sequencing

description: Additional exome sequencing data for NA12878. (XLSX 8 kb)
DOI: 10.6084/m9.figshare.c.3641213_d7.v1
title: MOESM6 of Genome-wide association study and biological pathway analysis of the Eimeria maxima response in broilers

description: Additional file 6: Table S6. Title: Significant SNPs associated with traits measured on all challenged animals. Description: Significant SNPs associated with traits measured on all challenged animals. A genome-wide association analysis was performed using Cobb500 broilers for all the measured traits during the large-scale study. SNPs were considered significant at q-value
DOI: 10.6084/m9.figshare.c.3641213_d6.v1
title: MOESM2 of Genome-wide association study and biological pathway analysis of the Eimeria maxima response in broilers

description: Additional file 2: Table S2. Title: Descriptive statistics for the distances between SNPs across chromosomes. Description: The table contains information on the number of SNPs per chromosome and the mean, median and standard deviation (SD) for the average distances between neighboring SNPs. Results in the table refer to genotype data after quality control.
DOI: 10.6084/m9.figshare.c.3641213_d9.v1
title: MOESM1 of Genome-wide association study and biological pathway analysis of the Eimeria maxima response in broilers

description: Additional file 1: Table S1. Title: Quality control of genotype data. Description: The genotype data were obtained from 1972 animals that were alive at day 16 of the challenge study. Genotype data were produced using 580 K Affymetrix® Axiom® HD genotyping array. The call rate threshold was set at 98 %, and all SNPs and samples with values less than 98 % were excluded. The minor allele frequency threshold was set at 1 % and animals with values less than 1 % were excluded. Heterozygote excess was assessed based on the distribution of F-statistics adjusted for skewness using adjbox function from the R package robustbase. Control animals were also excluded from the analysis. A total of 138,568 SNPs out of 580,961 were removed during the quality control.
DOI: 10.6084/m9.figshare.c.3641213_d10.v1
title: MOESM5 of Genome-wide association study and biological pathway analysis of the Eimeria maxima response in broilers

description: Additional file 5: Table S5. Title: Descriptive statistics of the measured traits. Description: Descriptive statistics of the traits measured on the challenged animals during the large-scale challenge study. Plasma coloration was measured as absorbance (optical density) of blood plasma at different wavelengths. Oocyst count is expressed as the raw number of oocysts per gram of feces. Erythrocyte count is expressed in millions per mm3 (M∙mm−3). White blood cell and thrombocyte count is expressed in absolute number per mm3 (count∙mm−3. Lymphocytes and heterophils are also expressed in the percentage of total number of white blood cells. MCV, MCH and MCHC correspond to mean cellular volume, mean corpuscular hemoglobin and mean corpuscular hemoglobin concentration, respectively.
DOI: 10.6084/m9.figshare.c.3641213_d12.v1
title: MOESM3 of Genome-wide association study and biological pathway analysis of the Eimeria maxima response in broilers

description: Additional file 3: Table S3. Title: List of annotated SNPs used for Biological Pathway Analysis. Description: The table contains SNPs used in the genome-wide association study with p-values
DOI: 10.6084/m9.figshare.c.3641240_d1.v1
title: MOESM2 of Hemodynamic numerical simulations of the disturbance due to intracoronary flow measurements by a Doppler guide wire

description: Additional file 2. java macro to be used with Star-CCM+ for inlet condition search (all Newtonâ  s iterations except first).
DOI: 10.6084/m9.figshare.c.3641240_d2.v1
title: MOESM1 of Hemodynamic numerical simulations of the disturbance due to intracoronary flow measurements by a Doppler guide wire

description: Additional file 1. Fourier coefficient decomposition for the first guess of the Newtonâ  s method.
DOI: 10.6084/m9.figshare.c.3641240_d3.v1
title: MOESM6 of Hemodynamic numerical simulations of the disturbance due to intracoronary flow measurements by a Doppler guide wire

description: Additional file 6. Geometry in parasolid file format, for configuration “without wire”.
DOI: 10.6084/m9.figshare.c.3641240_d4.v1
title: MOESM5 of Hemodynamic numerical simulations of the disturbance due to intracoronary flow measurements by a Doppler guide wire

description: Additional file 5. HTML file summarizing the parameters used in Star-CCM to run the simulations.
DOI: 10.6084/m9.figshare.c.3641801_d1.v1
title: Additional file 3: of The expansion of heterochromatin blocks in rye reflects the co-amplification of tandem repeats and adjacent transposable elements

description: Set of pSc250 family monomers used for reconstruction of phylogenetic network. File can be opened in BioEdit Sequence Alignment Editor. The name of each sequence consists of two parts: the right part from the dot points the chromosome-specific library, the left part from the dot points the read number in library. (TXT 550 kb)
DOI: 10.6084/m9.figshare.c.3641801_d3.v1
title: Additional file 2: of The expansion of heterochromatin blocks in rye reflects the co-amplification of tandem repeats and adjacent transposable elements

description: Set of pSc200 family monomers used for reconstruction of phylogenetic network. File can be opened in BioEdit Sequence Alignment Editor. The name of each sequence consists of two parts: the right part from the dot points the chromosome-specific library, the left part from the dot points the read number in library. (TXT 115 kb)
DOI: 10.6084/m9.figshare.c.3641804_d1.v1
title: Additional file 1: Table S1. of Discovery of new methylation markers to improve screening for cervical intraepithelial neoplasia grade 2/3

description: Identified DMRâ  s with sensitivity and specificity ranked on the sum of both. (XLSX 21 kb)
DOI: 10.6084/m9.figshare.c.3641816_d1.v1
title: Additional file 4: of ABO allele-level frequency estimation based on population-scale genotyping by next generation sequencing

description: Mappings from EAG group codes as used in the JAGS model calculations to the allele groups (AlleleGroupIdentifiers.csv). (CSV 6 kb)
DOI: 10.6084/m9.figshare.c.3642263_d3.v1
title: Additional file 1: of Combining powers of linkage and association mapping for precise dissection of QTL controlling resistance to gray leaf spot disease in maize (Zea mays L.)

description: Maize inbred lines representing Association Panel used for genome wide association study with their reaction to Cercospora represented by the average value of the Area Under Disease Progress Curve (AUDPC) in all four environments. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.c.3642266_d2.v1
title: Additional file 11: Table S2. of A novel comparative pattern analysis approach identifies chronic alcohol mediated dysregulation of transcriptomic dynamics during liver regeneration

description: The distribution of genes between the COMPACT groups and the WGCNA dynamic modules prior to merging in WGCNA. The column labels correspond to the module colors assigned by WGCNA. The row labels indicate the COMPACT group size, carbohydrate pattern and ethanol pattern. For example, the row label 0589-c0-10-e0-10 corresponds to a COMPACT group that contains 589 genes showing a downregulation only at 6Â h time point in both the dietary groups. (XLSX 49Â kb)
DOI: 10.6084/m9.figshare.c.3642263_d7.v1
title: Additional file 2: of Combining powers of linkage and association mapping for precise dissection of QTL controlling resistance to gray leaf spot disease in maize (Zea mays L.)

description: Days to silking data collected from the representatives of the Association panel planted in Sidney (IL) in 2012. Independent field trial was conducted in Sidney (IL) in 2012, where flowering time data were collected from 254 representatives of the Association Panel. Flowering time data were represented by days to silking (DTS) and measured as days from planting to silk emergence in 50Â % of plants in row. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.c.3642266_d4.v1
title: Additional file 1: Table S1. of A novel comparative pattern analysis approach identifies chronic alcohol mediated dysregulation of transcriptomic dynamics during liver regeneration

description: Normalized gene expression data for the statistically significant genes from the LLM samples, corresponding to the ethanol-adapted state. (XLSX 320Â kb)
DOI: 10.6084/m9.figshare.c.3642266_d11.v1
title: Additional file 13: Table S4. of A novel comparative pattern analysis approach identifies chronic alcohol mediated dysregulation of transcriptomic dynamics during liver regeneration

description: List of real-time PCR primers. (XLSX 36Â kb)
DOI: 10.6084/m9.figshare.c.3642266_d12.v1
title: Additional file 12: Table S3. of A novel comparative pattern analysis approach identifies chronic alcohol mediated dysregulation of transcriptomic dynamics during liver regeneration

description: The distribution of genes between the COMPACT groups and the WGCNA merging modules. The column labels correspond to the module colors assigned by WGCNA. The row labels indicate the COMPACT group size, carbohydrate pattern and ethanol pattern. For example, the row label 0589-c0-10-e0-10 corresponds to a COMPACT group that contains 589 genes showing a downregulation only at 6Â h time point in both the dietary groups. (XLSX 47Â kb)
DOI: 10.6084/m9.figshare.c.3642272_d1.v1
title: Additional file 3: of The quality of feedback during formative OSCEs depends on the tutorsâ   profile

description: Contains the data about the tutorsâ   sociodemographic data, clinical and teaching experience. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3642272_d3.v1
title: Additional file 2: of The quality of feedback during formative OSCEs depends on the tutorsâ   profile

description: Contains the data about the quality of the feedback perceived by the students. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.c.3642272_d2.v1
title: Additional file 1: of The quality of feedback during formative OSCEs depends on the tutorsâ   profile

description: Codes and definition of codes. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3642272_d4.v1
title: Additional file 4: of The quality of feedback during formative OSCEs depends on the tutorsâ   profile

description: Contains the data about the objective analysis of the quality of the feedback. (XLSX 33 kb)
DOI: 10.6084/m9.figshare.c.3642680_d7.v1
title: MOESM7 of The chicken erythrocyte epigenome

description: Additional file 7. Description of polychromatic erythrocyte sample sources. Each sample consisted of red blood cells collected from 11 to 12 anemic chickens: age and weight ranges.
DOI: 10.6084/m9.figshare.c.3642686_d1.v1
title: Additional file 1: of Macular choroidal thickness in normal Egyptians measured by swept source optical coherence tomography

description: Choroidal thickness, retinal thickness, choroidal thickness 1. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.c.3643250_d1.v1
title: Additional file 1: of Statin prescription initiation and lifestyle behaviour: a primary care cohort study

description: Online SPSS STATISTICS. (SAV 85Â kb)
DOI: 10.6084/m9.figshare.c.3643259_d1.v1
title: Additional file 1: of Induction of the type I interferon response in neurological forms of Gaucher disease

description: List of the differentially-expressed transcripts. (XLSX 330Â kb)