cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.potr60
title: Occurrence Download

description: A dataset listing the 3121 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pieridae"
 ]
}

 The dataset's 3121 records were derived from 1691 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015369-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4dtk4d
title: Occurrence Download

description: A dataset containing 8204 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Fagus sylvatica L.",
 "Year 1901-2024"
 ]
}

 The dataset includes 8204 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004021-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27193494
title: <b>Immunogenicity of a bivalent recombinant adenovirus expressing VP1 proteins of bovine norovirus and bovine nebovirus in mice</b>

description: Bovine norovirus (BNoV) and bovine nebovirus (BNeV) are emerging pathogens that cause severe diarrhea in calves worldwide. In this study, we constructed a bivalent recombinant adenovirus vector vaccine, named rAd5-BNoV+BNeV_VP1 encoding the genes for BNoV-VP1 and BNeV-VP1 based on replication-deficient human adenovirus type 5 (rAd5), and evaluated its immunogenicity following I.M. (intramuscular) and oral administration. Indirect enzyme-linked immunosorbent assays showed that the vaccination elicited significant VP1-specific IgG titers as early as two weeks post-vaccination. The BNoV-VP1-specific IgG antibody titers peaked at 1:10<sup>5 </sup>in the I.M. and oral groups; the BNeV-VP1-specific IgG antibody titers peaked at 1:10<sup>5</sup> in the I.M. groups<sup> </sup>and at 1:10<sup>4</sup> in the oral groups. BNeV-VP1-specific serum blocking titers (BT50) peaked at 640 in the I.M. and 576 in the oral groups. The percentages of IL-4 and CD3<sup>+</sup>CD8<sup>+</sup> T cells in the spleen cells of mice immunized with rAd5-BNoV+BNeV_VP1 via I.M. were significantly elevated. These findings suggest that vaccinating mice with rAd5-BNoV+BNeV_VP1 elicits strong humoral and cellular immune responses following I.M. and oral administration, and the immune responses produced by I.M. administration were superior to those produced by oral administration. These findings suggest the feasibility of rAd5-BNoV+BNeV_VP1 as a vaccine candidate for BNoV and BNeV.
DOI: 10.6084/m9.figshare.27193494.v1
title: <b>Immunogenicity of a bivalent recombinant adenovirus expressing VP1 proteins of bovine norovirus and bovine nebovirus in mice</b>

description: Bovine norovirus (BNoV) and bovine nebovirus (BNeV) are emerging pathogens that cause severe diarrhea in calves worldwide. In this study, we constructed a bivalent recombinant adenovirus vector vaccine, named rAd5-BNoV+BNeV_VP1 encoding the genes for BNoV-VP1 and BNeV-VP1 based on replication-deficient human adenovirus type 5 (rAd5), and evaluated its immunogenicity following I.M. (intramuscular) and oral administration. Indirect enzyme-linked immunosorbent assays showed that the vaccination elicited significant VP1-specific IgG titers as early as two weeks post-vaccination. The BNoV-VP1-specific IgG antibody titers peaked at 1:10<sup>5 </sup>in the I.M. and oral groups; the BNeV-VP1-specific IgG antibody titers peaked at 1:10<sup>5</sup> in the I.M. groups<sup> </sup>and at 1:10<sup>4</sup> in the oral groups. BNeV-VP1-specific serum blocking titers (BT50) peaked at 640 in the I.M. and 576 in the oral groups. The percentages of IL-4 and CD3<sup>+</sup>CD8<sup>+</sup> T cells in the spleen cells of mice immunized with rAd5-BNoV+BNeV_VP1 via I.M. were significantly elevated. These findings suggest that vaccinating mice with rAd5-BNoV+BNeV_VP1 elicits strong humoral and cellular immune responses following I.M. and oral administration, and the immune responses produced by I.M. administration were superior to those produced by oral administration. These findings suggest the feasibility of rAd5-BNoV+BNeV_VP1 as a vaccine candidate for BNoV and BNeV.
DOI: 10.15468/dl.66h3fy
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-39.65096 30.37306,-2.8236 30.37306,-2.8236 47.90989,-39.65096 47.90989,-39.65096 30.37306))",
 "TaxonKey is Photonectes braueri (Zugmayer, 1913)"
 ]
}

 The dataset includes 23 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004024-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4x7pmr
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Afrixalus morerei Dubois, 1986"
 ]
}

 The dataset includes 34 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004022-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.35097/894
title: Cubic-symmetry acoustic metamaterials with roton-like dispersion relations
DOI: 10.15468/dl.cr6nx3
title: Occurrence Download

description: A dataset containing 2112 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meristogenys orphnocnemis (Matsui, 1986)"
 ]
}

 The dataset includes 2112 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004023-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/3211
title: synthetic-multi-pii-ner-v1
DOI: 10.26180/27193764
title: Raw data for " Trimodal thermal energy storage material for renewable energy applications"

description: The files contain the raw data of all main and extended data figures in the paper under the title " Trimodal thermal energy storage material for renewable energy applications"
DOI: 10.26180/27193764.v1
title: Raw data for " Trimodal thermal energy storage material for renewable energy applications"

description: The files contain the raw data of all main and extended data figures in the paper under the title " Trimodal thermal energy storage material for renewable energy applications"
DOI: 10.15468/dl.aajm4n
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Afrixalus nigeriensis Schiøtz, 1963"
 ]
}

 The dataset includes 85 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004027-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vjhv9z
title: Occurrence Download

description: A dataset containing 4741 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Quercus suber L.",
 "Year 1901-2024"
 ]
}

 The dataset includes 4741 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004026-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.35097/1819
title: Electrical Conductivity and Photodetection in 3D-Printed Nanoporous Structures via Solution-Processed Functional Materials
DOI: 10.15468/dl.yzrgns
title: Occurrence Download

description: A dataset containing 644 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is ESP",
 "TaxonKey is Mustela nivalis Linnaeus, 1766",
 "Year 2008-2022"
 ]
}

 The dataset includes 644 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026494-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tybh3b
title: Occurrence Download

description: A dataset containing 188 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Meristogenys kinabaluensis (Inger, 1966)"
 ]
}

 The dataset includes 188 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004028-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dsytc3
title: Occurrence Download

description: A dataset containing 78629 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Occurrence evidence, Observation, Machine Observation)",
 "Geometry POLYGON((32.07686 -22.66669,32.07686 -22.343,27.87242 -21.5305,25.29488 -25.10272,23.2748 -24.4554,21.49238 -26.17399,20.18526 -24.34718,19.35346 -28.18229,15.16129 -27.70585,13.22685 -28.3462,14.92363 -33.23844,17.06254 -36.16851,22.40982 -36.45577,28.11358 -35.78386,33.22321 -31.43133,35.00563 -27.18455,33.46086 -24.51141,32.07686 -22.66669))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 78629 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004025-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13790109
title: Sentinel-2 New Anomalies AI4QC

description: This dataset was used in the AI4QC project (Artificial Intelligence for Quality Control), in the context of the detection of new anomalies through unsupervised learning (unlabeled data). It consists of 6452 Sentinel-2 images (true color images in jpg format). The dataset was divided into training and testing folders (80% training and 20% testing). Two criterias were considered for the train/test split: seasonality and geographic location.
DOI: 10.15468/dl.evchgx
title: Occurrence Download

description: A dataset containing 17234 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Arundo donax L.",
 "Year 1901-2024"
 ]
}

 The dataset includes 17234 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004029-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13907209
title: Sentinel-2 New Anomalies AI4QC

description: This dataset was used in the AI4QC project (Artificial Intelligence for Quality Control), in the context of the detection of new anomalies through unsupervised learning (unlabeled data). It consists of 6452 Sentinel-2 images (true color images in jpg format). The dataset was divided into training and testing folders (80% training and 20% testing). Two criterias were considered for the train/test split: seasonality and geographic location. 

An additional folder, "S2_additional_data" contains 61 more products which were flagged as anomalous by the MPC. This data is not included in the train/test folders but can be used if one wishes to increase the amount of S2 products.
DOI: 10.5281/zenodo.13790108
title: Sentinel-2 New Anomalies AI4QC

description: This dataset was used in the AI4QC project (Artificial Intelligence for Quality Control), in the context of the detection of new anomalies through unsupervised learning (unlabeled data). It consists of 6452 Sentinel-2 images (true color images in jpg format). The dataset was divided into training and testing folders (80% training and 20% testing). Two criterias were considered for the train/test split: seasonality and geographic location. 

An additional folder, "S2_additional_data" contains 61 more products which were flagged as anomalous by the MPC. This data is not included in the train/test folders but can be used if one wishes to increase the amount of S2 products.
DOI: 10.5281/zenodo.13789233
title: Sentinel-1 New Anomalies AI4QC

description: This dataset was used in the AI4QC project (Artificial Intelligence for Quality Control), in the context of the detection of new anomalies through unsupervised learning (unlabeled data). It consists of 6344 Sentinel-1 images (quick-looks in png format). The dataset was divided into training and testing folders (80% training and 20% testing). Two criterias were considered for the train/test split: seasonality and geographic location.  

An additional folder, "S1_additional_data" contains 14 more products which were collected from the region around Hawaii, which tends to give products containing RFIs. This data is not included in the train/test folders but can be used if one wishes to increase the amount of S1 products.
DOI: 10.5281/zenodo.13907111
title: Sentinel-1 New Anomalies AI4QC

description: This dataset was used in the AI4QC project (Artificial Intelligence for Quality Control), in the context of the detection of new anomalies through unsupervised learning (unlabeled data). It consists of 6344 Sentinel-1 images (quick-looks in png format). The dataset was divided into training and testing folders (80% training and 20% testing). Two criterias were considered for the train/test split: seasonality and geographic location.  

An additional folder, "S1_additional_data" contains 14 more products which were collected from the region around Hawaii, which tends to give products containing RFIs. This data is not included in the train/test folders but can be used if one wishes to increase the amount of S1 products.
DOI: 10.15468/dl.nfj8jg
title: Occurrence Download

description: A dataset containing 1153 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Afrixalus osorioi (Ferreira, 1906)"
 ]
}

 The dataset includes 1153 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004030-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.35097/911
title: A neural operator-based surrogate solver for free-form electromagnetic inverse design
DOI: 10.5281/zenodo.13907235
title: Appendix for 'Current Trends of Digital Marketing in the Indian Pharmaceutical Industry'

description: This appendix provides supplementary materials for the research paper titled "Current Trends of Digital Marketing in the Indian Pharmaceutical Industry." It includes detailed survey questions, statistical analyses, reliability and validity reports, and comparisons of digital marketing strategies between Indian and multinational pharmaceutical companies.
DOI: 10.5281/zenodo.13907236
title: Appendix for 'Current Trends of Digital Marketing in the Indian Pharmaceutical Industry'

description: This appendix provides supplementary materials for the research paper titled "Current Trends of Digital Marketing in the Indian Pharmaceutical Industry." It includes detailed survey questions, statistical analyses, reliability and validity reports, and comparisons of digital marketing strategies between Indian and multinational pharmaceutical companies.
DOI: 10.15468/dl.p3ph28
title: Occurrence Download

description: A dataset containing 9112 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Macrochloa tenacissima (L.) Kunth",
 "Year 1901-2024"
 ]
}

 The dataset includes 9112 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004031-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z2tmpv
title: Occurrence Download

description: A dataset containing 9163 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (United States of America, Canada)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Caulophyllum thalictroides (L.) Michx."
 ]
}

 The dataset includes 9163 records from 104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004032-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13340926
title: Single-cell transcriptomes identify patient-tailored therapies for selective co-inhibition of cancer clones

description: Intratumoral cellular heterogeneity necessitates multi-targeting therapies for improved clinical benefits in advanced malignancies. However, systematic identification of patient-specific treatments that selectively co-inhibit cancerous cell populations poses a combinatorial challenge, since the number of possible drug-dose combinations vastly exceeds what could be tested in patient cells. Here, we describe a machine learning approach, scTherapy, which leverages single-cell transcriptomic profiles to prioritize multi-targeting treatment options for individual patients with hematological cancers or solid tumors. Patient-specific treatments reveal a wide spectrum of co-inhibitors of multiple biological pathways predicted for primary cells from heterogenous cohorts of patients with acute myeloid leukemia and high-grade serous ovarian carcinoma, each with unique resistance patterns and synergy mechanisms. Experimental validations confirm that 96% of the multi-targeting treatments exhibit selective efficacy or synergy, and 83% demonstrate low toxicity to normal cells, highlighting their potential for therapeutic efficacy and safety. In a pan-cancer analysis across five cancer types, 25% of the predicted treatments are shared among the patients of the same tumor type, while 19% of the treatments are patient-specific. Our approach provides a widely-applicable strategy to identify personalized treatment regimens that selectively co-inhibit malignant cells and avoid inhibition of non-cancerous cells, thereby increasing their likelihood for clinical success.

 

 

Please also cite the original publication if this data is used in your work:

Ianevski, A., Nader, K., Driva, K., Senkowski, W., Bulanova, D., Moyano-Galceran, L., Ruokoranta, T., Kuusanmäki, H., Ikonen, N., Sergeev, P., Vähä-Koskela, M., Giri, A. K., Vähärautio, A., Kontro, M., Porkka, K., Pitkänen, E., Heckman, C. A., Wennerberg, K., & Aittokallio, T. (2024). Single-cell transcriptomes identify patient-tailored therapies for selective co-inhibition of cancer clones. Nature communications, 15(1), 8579. https://doi.org/10.1038/s41467-024-52980-5
DOI: 10.5281/zenodo.13340927
title: Single-cell transcriptomes identify patient-tailored therapies for selective co-inhibition of cancer clones

description: Intratumoral cellular heterogeneity necessitates multi-targeting therapies for improved clinical benefits in advanced malignancies. However, systematic identification of patient-specific treatments that selectively co-inhibit cancerous cell populations poses a combinatorial challenge, since the number of possible drug-dose combinations vastly exceeds what could be tested in patient cells. Here, we describe a machine learning approach, scTherapy, which leverages single-cell transcriptomic profiles to prioritize multi-targeting treatment options for individual patients with hematological cancers or solid tumors. Patient-specific treatments reveal a wide spectrum of co-inhibitors of multiple biological pathways predicted for primary cells from heterogenous cohorts of patients with acute myeloid leukemia and high-grade serous ovarian carcinoma, each with unique resistance patterns and synergy mechanisms. Experimental validations confirm that 96% of the multi-targeting treatments exhibit selective efficacy or synergy, and 83% demonstrate low toxicity to normal cells, highlighting their potential for therapeutic efficacy and safety. In a pan-cancer analysis across five cancer types, 25% of the predicted treatments are shared among the patients of the same tumor type, while 19% of the treatments are patient-specific. Our approach provides a widely-applicable strategy to identify personalized treatment regimens that selectively co-inhibit malignant cells and avoid inhibition of non-cancerous cells, thereby increasing their likelihood for clinical success.

 

 

Please also cite the original publication if this data is used in your work:

Ianevski, A., Nader, K., Driva, K., Senkowski, W., Bulanova, D., Moyano-Galceran, L., Ruokoranta, T., Kuusanmäki, H., Ikonen, N., Sergeev, P., Vähä-Koskela, M., Giri, A. K., Vähärautio, A., Kontro, M., Porkka, K., Pitkänen, E., Heckman, C. A., Wennerberg, K., & Aittokallio, T. (2024). Single-cell transcriptomes identify patient-tailored therapies for selective co-inhibition of cancer clones. Nature communications, 15(1), 8579. https://doi.org/10.1038/s41467-024-52980-5
DOI: 10.35097/856
title: A T-matrix Based Approach to Homogenize Artificial Materials
DOI: 10.35097/1019
title: Dissertation_Kempter,Xenia_Gelatine-basierte Hydrogele fuer den 3D Biodruck von Gewebemodellen
DOI: 10.15468/dl.pdzbrs
title: Occurrence Download

description: A dataset containing 647 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Glycyrrhiza glabra L.",
 "Year 1901-2024"
 ]
}

 The dataset includes 647 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004033-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27193395
title: Leuconeurospora bharatiensis aligned sequences and concatenated tree ITS and LSU tree

description: <i>Leuconeurospora bharatiensis</i> was isolated from accumulated snow sediment from Larsemann Hills, near the Indian research station Bharati, Antarctica.Based on the phylogenetic analyses of the ITS region and D1/D2 domain of the 28S nrRNA gene (LSU), a new species in the genus Leuconeurospora is proposed and positioned in the clade with L. pulcherrima and L. capsici. It represents the fourth species in the genus Leuconeurospora. The LSU sequence of L. polypaeciloides was unavailable for comparison, hence it has been excluded from the phylogenetic analysis.<br>
DOI: 10.6084/m9.figshare.27190986
title: Data_A comparative analysis of mutated genes that are enriched in deceased patients from cBioPortal analysis.xlsx

description: The cBioPortal for Cancer Genomics was utilized as the primary database to collect patient data and analyze survival outcomes. A total of 16 studies were organized, focusing on clinical data related to patient survival: Brain Lower Grade Glioma (TCGA, Firehose Legacy), Brain Lower Grade Glioma (TCGA, PanCancer Atlas), Diffuse Glioma (GLASS Consortium), Diffuse Glioma (GLASS Consortium, Nature 2019), Diffuse Glioma (MSK, Clin Cancer Res 2024), Glioma (MSK, Clin Cancer Res 2019), Glioma (MSK, Nature 2019), Low-Grade Gliomas (UCSF, Science 2014), Merged Cohort of LGG and GBM (TCGA, Cell 2016), Brain Tumor PDXs (Mayo Clinic, Clin Cancer Res 2020), Glioblastoma (CPTAC, Cell 2021), Glioblastoma (Columbia, Nat Med. 2019), Glioblastoma (TCGA, Cell 2013), Glioblastoma (TCGA, Nature 2008), Glioblastoma Multiforme (TCGA, Firehose Legacy), Glioblastoma Multiforme (TCGA, PanCancer Atlas).  The clinical tab was selected for analysis, and survival graphs were generated for patient groups based on survival status (live and deceased groups). The p-values associated with the survival curves were carefully evaluated to ensure the best accuracy. This study's survival data encompassed 2,444 patients in the living group and 3,226 patients in the deceased group.