cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.k5u7am
title: Occurrence Download

description: A dataset containing 3601 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Corvus dauuricus",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 3601 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068019-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5285/186cbb2a-642c-eaa0-e063-7086abc04047
title: Dissolved Organic Carbon (DOC) and Dissolved Organic Nitrogen (DON) measurements from CTD Niskin collected depth profiles along the Atlantic Meridional Transect during cruise AMT28 (JR18001) from September to October 2018.

description: In this dataset, we include Dissolved Organic Carbon and Dissolved Organic Nitrogen collected by Cecilia Liszka and determined by Edward Mawji directly from the TOC/TN analyser. Discrete CTD water samples were taken at 4 depths between the surface and 200 m in September-October 2018 during cruise AMT28 for the REMineralisation of organic carbon by marine bActerIoplanktoN (REMAIN) project (NE/R000956/1).
DOI: 10.15468/dl.53j37x
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cephalotaxus oliveri Mast.",
 "Year 1000-2010"
 ]
}

 The dataset includes 80 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046707-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t3mvgc
title: Occurrence Download

description: A dataset containing 503 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "OccurrenceStatus is Present",
 "TaxonKey is Panthera onca (Linnaeus, 1758)",
 "Year 2010-2023"
 ]
}

 The dataset includes 503 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003425-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4b6n9a
title: Occurrence Download

description: A dataset containing 2637 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Agriornis murinus (Orbigny & Lafresnaye, 1837), Agriornis murina (Orbigny & Lafresnaye, 1837))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2637 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294043-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.89rrmy
title: Occurrence Download

description: A dataset containing 275555 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lactuca serriola L."
 ]
}

 The dataset includes 275555 records from 2024 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053123-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c3xpb5
title: Occurrence Download

description: A dataset containing 224 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ricotia cretica"
 ]
}

 The dataset includes 224 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016853-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fp8wuw
title: Occurrence Download

description: A dataset containing 153 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ricinus communis",
 "Country is Nicaragua",
 "HasCoordinate is true"
 ]
}

 The dataset includes 153 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016852-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fnyhpx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Briza media pallescens, Briza media pallescens, Briza media pallescens, Briza media pallida, Briza media pauciflora, Briza media pilosa, Briza media repens, Briza media serotina, Briza media stolonifera, Briza media violacea)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016855-250711103210423/datasets/export for details.
DOI: 10.17026/ar/u6y0wd
title: Waar boeren ploeterden, woonplaatsen verzopen en kogelpotten vertelden
title: Archeologisch onderzoek naar middeleeuwse bewoning in Nieuwbouwwijk De Tuinen II in Ursem, gemeente Koggenland

description: De oudste sporen in Ursem De Tuinen II bestaan uit een noordwest-zuidoost georiënteerde sloot die door het veenpakket heen is gegraven tot in de onderliggende mariene klei. Deze kan worden geïnterpreteerd als onderdeel van een vroeg verkavelingspatroon, mogelijk uit de 10de eeuw.
Uit fase 2 (1175-1275) zijn meerdere daliekuilen aangetroffen. Deze kuilen zijn gegraven om kalkrijke klei te winnen die werd gebruikt om de voedselarme en natte veenbodem te verbeteren. De klei verbeterde de bodemstructuur, verlaagde de zuurgraad en vergrootte de vruchtbaarheid, waardoor landbouw op veengronden beter mogelijk werd.
Daliekuil S21 leverde een grote hoeveelheid vondstmateriaal op, waaronder kogelpotscherven, proto-steengoed, dierlijk bot en organisch afval. Ook zijn er sporen van huttenleem en assige lagen in nabijgelegen kuilen aangetroffen. Dit wijst op huishoudelijk gebruik van het terrein in de Late-Middeleeuwen. De bebouwing bevond zich vermoedelijk zuidelijker of iets oostelijker, op perceel 1 (Ursem De Tuinen I), waar eerder een huisplaats is aangetroffen. 
In de vroege 14de eeuw werden enkele van de eerder gegraven daliekuilen opnieuw benut als afvalkuilen. De kuilen, oorspronkelijk bedoeld voor het winnen van kalkrijke klei, raakten na hun primaire gebruik opgevuld met huishoudelijk en bouwafval. De vullingen bestaan voornamelijk uit kogelpotscherven, bijna-steengoed en steengoed, dierlijk bot, huttenleemfragmenten, verbrandingsresten en organisch materiaal.
Daliekuil S21 biedt het beste inzicht in deze hergebruiksfase. De kuil bevatte een gesloten vondstcomplex dat kan worden gedateerd tussen ca. 1300 en 1335. Er zijn ruim 1100 aardewerkfragmenten verzameld. De combinatie van gebruiksaardewerk, huttenleem en verbrande resten suggereert dat afval afkomstig was van huishoudens en mogelijk van afbraak of brandschade van een nabijgelegen gebouw. Binnen het plangebied zijn echter geen paalsporen, funderingen of vloerniveaus aangetroffen die duiden op bewoning. Vermoedelijk is het afval gestort vanuit de bewoning op perceel 1 (Ursem De Tuinen I), waar wel sporen van een huisplaats zijn vastgesteld.
Na het verlaten van de nederzetting langs de Zuidergouw en omliggende percelen verplaatste de bewoning zich waarschijnlijk naar hoger gelegen gebieden. Uit archeologisch onderzoek blijkt dat bewoners zich vanaf het einde van de 13de en het begin van de 14de eeuw vestigden langs de Walingsdijk en de Drechterlandsedijk. Deze dijken boden betere bescherming tegen wateroverlast.
DOI: 10.15468/dl.8tck3y
title: Occurrence Download

description: A dataset containing 207 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diptychocarpus strictus"
 ]
}

 The dataset includes 207 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016856-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e6afx7
title: Occurrence Download

description: A dataset containing 33283 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Youngia japonica"
 ]
}

 The dataset includes 33283 records from 497 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016854-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xaym2z
title: Occurrence Download

description: A dataset containing 5660 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Macleania rupestris"
 ]
}

 The dataset includes 5660 records from 176 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016857-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xgjja5
title: Occurrence Download

description: A dataset containing 2533 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acacia senegal",
 "HasCoordinate is true",
 "Geometry POLYGON ((-17.66889 -35.11691, 51.34702 -35.11691, 51.34702 37.62, -17.66889 37.62, -17.66889 -35.11691))"
 ]
}

 The dataset includes 2533 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016860-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ahtg6p
title: Occurrence Download

description: A dataset containing 3736 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apis mellifera",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3736 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016859-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15911200
title: Microlag - Datasets & Scripts

description: In this archive, the reader will find curated datasets, scripts to analyze them and produced figures. 

Abstract: 

Young oysters of Pacific oyster Magallana (Crassostrea) gigas are regularly impacted by summer mortalities since 2008, caused by the infection by the Ostreid herpesvirus 1 (OsHV-1) when seawater temperature increases in summer. Adult oysters rather suffer from a vibriosis caused by the bacterial primary pathogen Vibrio aestuarianus francensis. Although these diseases are now well described, little is known about their contribution and possible synergy in natural mortality events of juvenile oysters. Using an in-situ approach conducted in the Thau lagoon, we investigated the potential implication of Vibrio aestuarianus in the juvenile oyster’s mortality, as well as the virus OsHV-1, throughout a large sampling period from winter to late summer, after the mortality event. We further determined their respective effects on the microbial abundance and diversity on alive and moribund oysters. We demonstrated that microbiomes are dynamic throughout seasons and tend to homogenize in spring with a dominance of Mycoplasmataceae in alive oysters. Surprisingly, our data highlighted the prevalence and high loads of Vibrio aestuarianus in all moribund oysters. Contrasting with literature, we found that the microbial communities of moribund juvenile oysters were significantly influenced by both Vibrio aestuarianus and the virus OsHV-1. The moribund bacterial indicators were detected in abundance during mortalities in the surrounding environment of oyster farms and further (700m far). These results highlight the connectivity between the different compartments of the lagoon and raise questions about the potential spread of the primary pathogen Vibrio aestuarianus from adult to juvenile oysters in farming areas located in lagoons.
DOI: 10.5281/zenodo.15911201
title: Microlag - Datasets & Scripts

description: In this archive, the reader will find curated datasets, scripts to analyze them and produced figures. 

Abstract: 

Young oysters of Pacific oyster Magallana (Crassostrea) gigas are regularly impacted by summer mortalities since 2008, caused by the infection by the Ostreid herpesvirus 1 (OsHV-1) when seawater temperature increases in summer. Adult oysters rather suffer from a vibriosis caused by the bacterial primary pathogen Vibrio aestuarianus francensis. Although these diseases are now well described, little is known about their contribution and possible synergy in natural mortality events of juvenile oysters. Using an in-situ approach conducted in the Thau lagoon, we investigated the potential implication of Vibrio aestuarianus in the juvenile oyster’s mortality, as well as the virus OsHV-1, throughout a large sampling period from winter to late summer, after the mortality event. We further determined their respective effects on the microbial abundance and diversity on alive and moribund oysters. We demonstrated that microbiomes are dynamic throughout seasons and tend to homogenize in spring with a dominance of Mycoplasmataceae in alive oysters. Surprisingly, our data highlighted the prevalence and high loads of Vibrio aestuarianus in all moribund oysters. Contrasting with literature, we found that the microbial communities of moribund juvenile oysters were significantly influenced by both Vibrio aestuarianus and the virus OsHV-1. The moribund bacterial indicators were detected in abundance during mortalities in the surrounding environment of oyster farms and further (700m far). These results highlight the connectivity between the different compartments of the lagoon and raise questions about the potential spread of the primary pathogen Vibrio aestuarianus from adult to juvenile oysters in farming areas located in lagoons.
DOI: 10.15468/dl.tfgmtc
title: Occurrence Download

description: A dataset containing 4768 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cynara humilis"
 ]
}

 The dataset includes 4768 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016858-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.he938n
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mostacillastrum pandurifolium"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016862-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fztc9y
title: Occurrence Download

description: A dataset containing 27501 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apis mellifera",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 27501 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016861-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x8nnpw
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gobio vernalis"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016863-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57703/ce-bnvd2
title: Surface Topography Challenge S73_50x_CSIr

description: Surface Topography measured by Polytec WLI (TopMap Micro.View+)
50x Optic
250x250µm²
DOI: 10.15468/dl.2c7kna
title: Occurrence Download

description: A dataset containing 279 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Andrena marginata",
 "Geometry POLYGON((-8.00174339329464 54.1998526673513, 0.202120938926891 54.1998526673513, 0.202120938926891 61.2628565887411, -8.00174339329464 61.2628565887411, -8.00174339329464 54.1998526673513))",
 "CoordinateUncertaintyInMeters is 0,101",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 279 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016864-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d4ts4a
title: Occurrence Download

description: A dataset containing 293 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Macleania stricta"
 ]
}

 The dataset includes 293 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016867-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2jw9kn
title: Occurrence Download

description: A dataset containing 9134 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zanthoxylum americanum"
 ]
}

 The dataset includes 9134 records from 212 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016868-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3kb8km
title: Occurrence Download

description: A dataset containing 1199 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apis mellifera",
 "Country is Bolivia (Plurinational State of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1199 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016865-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vmgyxp
title: Occurrence Download

description: A dataset containing 8201 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Briza media virens, Briza pauciflora, Briza pilosa, Briza serotina, Briza tremula, Briza viridis, Briza viridis, Poa media, Briza minor, Briza aspera)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 8201 records from 379 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016866-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/chs-c65-1221
title: Exterior view of a white brick mausoleum at Los Angeles Pet Memorial Park, 1930-1950

description: Photograph of a white brick mausoleum at Los Angeles Pet Memorial Park, 1930-1950. A metal dome is visible on the top of the building, topped by a flagpole. A hill lined with evergreens is behind the building while a gravel road appears before it. A thick chimney at the rear of the building is decorated with concrete crosses near the top. Above the rectangular door of the structure appears the number 929.
DOI: 10.25549/chs-c65-673
title: Exterior view of the Student Union building on the campus of the University of Southern California, [s.d.]

description: Photograph of an exterior view of the Student Union building on the campus of the University of Southern California, [s.d.]. The three-story building can be seen at center and is generally rectangular in shape. The walls are constructed of a mixture of light- and dark-colored bricks, and large arched windows can be seen. An arched doorway is visible near the corner of the building at center. Several chimneys protrude above the level of the terracotta tile-covered roof. At right, several automobiles are parked in front of the building, and people can be seen standing nearby. A paved street runs across the image in the foreground.
DOI: 10.25549/chs-c65-1646
title: Swimmers in the Great Salt Lake in front of the Saltair Pavilion, Utah, [s.d.]

description: Photograph of about 30 swimmers floating in the Great Salt Lake in demonstration of the natural buoyancy of the water in front of the large old Saltair Pavilion, Utah, [s.d.]. Many of them hold their feet and hands above the surface of the water. The large Byzantine-style pavilion can be seen in the center. Several tall towers stick up from its perimeter, and covered balconies are visible on both of its stories. The pavilion is built on a long pier that stretches from right to left.