cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.khfc2b
title: Occurrence Download

description: A dataset containing 6489 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Anfibios y reptiles del estado de Tamaulipas, México"
 ]
}

 The dataset includes 6489 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060648-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21430/m34t975slb
title: Molecular signatures in a Hepatitis B Vaccine-immunized neonatal Tissue Construct in vitro correlate with antibody response in vivo

description: We employ our 3-dimensional tissue construct model that was previously used to investigate and replicate human age- specific vaccine responses in vivo, to a) gain insights into vaccine-induced OMIC signatures after single vs combined vaccination and b) investigate the association between human in vitro OMIC signatures and human in vivo hepatitis B antibody titers, a universally-accepted correlate of vaccine-induced protection.
DOI: 10.21430/m3ro5q6ubd
title: Transcriptional signatures associated with induction of protective influenza stalk specific antibody and bone marrow plasma cells by mRNA vaccine in macaques

description: The authors utilized sequential immunization with mRNA vaccines expressing chimeric hemagglutinin (cHA) antigens to induce stalk specific humoral immunity in non-human primates (NHPs) with preexisting influenza virus immunity.
DOI: 10.21430/m3bl693zmo
title: Maintenance of protective immunity to COVID-19 vaccines in multiple sclerosis patients on B cell-depleting therapy

description: Immune-mediated protection generated to COVID-19 mRNA vaccines is correlated to the presence of anti-Spike protein neutralizing antibodies. B cell depleting (BCD) therapies used to treat multiple sclerosis (MS), diminish this humoral response, though T cell-mediated immunity can be generated. To study the long-term persistence of these differential responses, the effects of different types and modes of immune modulators, and the resultant effects of protection in patients with MS, we evaluated the humoral and cellular response to COVID-19 vaccines in patients with MS from four centers, ranging from one to 70 weeks post-vaccination. BCD therapies in patients with MS significantly reduced the antibody response and enhanced the cellular response to COVID-19 vaccination, with some variations among different anti-CD20 drugs. Despite these alterations persisting for many months following vaccination, the patients retained protective immunity. These results highlight the critical role of T cell-mediated immunity in anti-viral protection independent of humoral immunity.
DOI: 10.21430/m3ec0qqknp
title: Systems Biology to Identify Biomarkers of Neonatal Vaccine Immunogenicity - Papua New Guinea (PNG) Validation cohort

description: Infection is the most common cause of death in early life, especially for newborns and can be reduced by immunization but insufficient knowledge of how vaccines protect the very young limits their optimal use. To gain insight into how vaccines induce protection of the most vulnerable, our project employs two novel approaches studying newborn responses to hepatitis B vaccine (HBV): (a) systems biology that uses technologies which comprehensively measure global changes in molecules such as transcriptomics (RNA) and proteomics (proteins), as well as cell composition of the blood and (b) use of human newborn blood components, collected prior to immunization, to model vaccine responses in vitro (outside the body). Characterizing vaccine-induced molecular patterns (signatures) that correspond to vaccine-mediated protection will accelerate development and optimization of vaccines against early life infections of major global health importance.
DOI: 10.21430/m3g54mxzb9
title: Airway T cell Dynamics in Children with Treatment-Refractory Recurrent Wheeze

description: An analysis of T cells in the lower airways to provide an in-depth characterization of the T cell landscape and to identify signatures associated with RV infection.
DOI: 10.21430/m3d6pus0m7
title: A STUB1-CHIC2 complex inhibits CD8+ T cells to restrain tumor immunity

description: In vivo CRISPR screens in CD8+ T cells have previously uncovered targets for cancer immunotherapy; however, a minority of the genome has been individually annotated, suggesting additional regulators remain to be discovered. Here we assessed 899 genes in CD8+ T cells responding to murine melanoma and identified the E3 ubiquitin ligase STUB1 as a novel negative regulator of anti-tumor CD8+ T cell function. We demonstrated that Stub1 knockout CD8+ T cells effectively control tumor growth across multiple murine models. Mechanistically, STUB1 interacts with the adapter protein CHIC2 to regulate cytokine receptor expression in mouse and human CD8+ T cells. Among the regulated cytokine receptors, IL-27Ra is essential for tumor growth control mediated by Stub1 or Chic2 knockout CD8+ T cells. Together, these findings establish the STUB1-CHIC2 complex as a novel regulator of cytokine receptor expression in CD8+ T cells and provide rationale for inhibiting this pathway to enhance CD8+ T cell-mediated anti-tumor immunity.
DOI: 10.21430/m3vqfcse7p
title: Innate and T-cellular immune responses to sequential vaccination with chimeric hemagglutinin split influenza virus vaccines in mice

description: The authors provide an in-depth characterization of the innate immune response and antigen-specific T-cellular immune response in mice.
DOI: 10.21430/m35z4vsb5n
title: Cytokine profiles in patients with chronic systolic heart failure

description: In this study we investigated chronic heart failure (HF)-associated cytokine signatures, both compared to healthy controls and in relation to chronic HF severity.
DOI: 10.21430/m38p03m9g9
title: Purification and characterization of recombinant neuraminidase as a broadly protective influenza virus vaccine candidate

description: The authors detail the development of a downstream process for purifying of His-tagged recombinant neuraminidase for a phase I clinical study.
DOI: 10.21430/m39ybc30zv
title: Analysis of SARS-CoV-2 infection and vaccination in high risk participants.

description: Evaluation of SARS-CoV-2 infection and vaccination longitudinally in a high risk population reveals Hispanic participants have an increased risk of infections.
DOI: 10.21430/m3hlev7yxj
title: Induction of Antigen-Specific Tolerance in Multiple Sclerosis Model without Broad Immunosuppression

description: Development of tolerogenic microparticle (MP) therapy made of acetalated dextran and loaded with antigenic peptide and tolerizing drug rapamycin (Rapa) to address problems with Multiple Sclerosis (MS) autoimmune disease.
DOI: 10.21430/m34jq7ijeq
title: Maturation of germinal center B cells after influenza virus vaccination in humans

description: The investigators used fine needle aspiration of draining lymph nodes to longitudinally track antigen-specific GC B cell responses to seasonal influenza vaccination.
DOI: 10.21430/m3poauawjf
title: Assessing the structural boundaries of antibody interactions with Influenza hemagglutinin proteins

description: Assessment of the resilience of vaccine-induced immunity to diverging Influenza strains.
DOI: 10.21430/m3b65z3nji
title: First Lung Infection Permanently Enlarges Lymph Nodes and Enhances New T Cell Responses

description: Here, the investigators perform immunology and vaccinology studies on naive specific pathogen-free mice responding to their very first respiratory challenge
DOI: 10.21430/m3mkapvuoa
title: Structurally convergent antibodies derived from different vaccine strategies target the influenza virus HA anchor epitope with a subset of VH3 and VK3 genes

description: Here, the authors structurally and biophysically characterize four antibodies that bind to a conserved region on the HA membrane-proximal region known as the anchor epitope.
DOI: 10.21430/m3b3zt7u85
title: Structural characterization of influenza group 1 chimeric hemagglutinins as broad vaccine immunogens

description: Using X-ray crystallography and negative-stain electron microscopy, the authors determined structures of cH5/1, cH8/1, and cH11/1 HAs in their unliganded and antibody Fab-bound states.
DOI: 10.21430/m3ctv4518x
title: Alarming antibody evasion properties of rising SARS-CoV-2 BQ and XBB subvariants

description: The authors investigate whether neutralization is markedly impaired, against Omicron and its subvariants, for individuals vaccinated/boosted with SARS-CoV-2 vaccines or those previously infected.
DOI: 10.5522/04/27337557
title: Raw reads Meta16S Illumina MiSeq metabarcoding library

description: Demultiplexed raw reads of the Meta16S Illumina MiSeq metabarcoding library using the 2 X 250 chemistry kit. The metabarcoding contains sequences with a size range of 200 to 280 bp from both vertebrate and invertebrate groups. The files contained include true samples, positive control and negative controls. The data contained in the files was assessed using the Python package FastQC, while processing and filtering were conducted using the R package dada2 for Amplicon Sequence Variants (ASVs) generation. Downstream analysis was performed using R package <i>phyloseq</i> and formatted for ecological analyses using additional R packages (e.g. <i>vegan</i>).<br>
DOI: 10.5522/04/27337557.v1
title: Raw reads Meta16S Illumina MiSeq metabarcoding library

description: Demultiplexed raw reads of the Meta16S Illumina MiSeq metabarcoding library using the 2 X 250 chemistry kit. The metabarcoding contains sequences with a size range of 200 to 280 bp from both vertebrate and invertebrate groups. The files contained include true samples, positive control and negative controls. The data contained in the files was assessed using the Python package FastQC, while processing and filtering were conducted using the R package dada2 for Amplicon Sequence Variants (ASVs) generation. Downstream analysis was performed using R package <i>phyloseq</i> and formatted for ecological analyses using additional R packages (e.g. <i>vegan</i>).<br>
DOI: 10.21430/m3bxs9gyqu
title: Immunophenotyping by Spectral Flow Cytometry of 12-month Sjögren's IL14alpha and WT Murine SMG

description: Immunophenotyping data using spectral flow cytometry to characterize the B and T cell populations present in the submandibular glands from IL-14alpha transgenic Sjögren's mice and C57BL/6 wildtype (WT) female mice at 12 months of age.
DOI: 10.21430/m3bra9cso9
title: Multivalent COBRA influenza vaccine elicits immune response in pre-immune ferrets

description: Ferrets with pre-existing immunity to influenza viruses were vaccinated with COBRA-based vaccines and the immune response evaluated through a series of assays.
DOI: 10.15468/dl.pgcvbe
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Micrasterias C.Agardh ex Ralfs, 1848",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -23.2724,25.1306 -24.0715,25.5395 -24.0715,25.5395 -23.2724))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060651-250525065834625/datasets/export for details.
DOI: 10.5522/04/27337047
title: Metadata from Illumina MiSeq metabarcoding library (Meta16S primer pair)

description: A CSV file describing the metadata from the Illumina MiSeq metabarcoding library obtained with the Meta16S primer pair to identify true samples, positive (fish and amphibian mock community) and negative controls (including field, extraction and PCR blanks). The data contained in the file was managed with R package <i>phyloseq</i> and formatted for ecological analyses using additional R packages (e.g. <i>vegan</i>). <br><br>
DOI: 10.5522/04/27337047.v1
title: Metadata from Illumina MiSeq metabarcoding library (Meta16S primer pair)

description: A CSV file describing the metadata from the Illumina MiSeq metabarcoding library obtained with the Meta16S primer pair to identify true samples, positive (fish and amphibian mock community) and negative controls (including field, extraction and PCR blanks). The data contained in the file was managed with R package <i>phyloseq</i> and formatted for ecological analyses using additional R packages (e.g. <i>vegan</i>). <br><br>
DOI: 10.15468/dl.62wary
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plica pansticta (Myers & Donnelly, 2001)"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060652-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57783/q0f7-pz35
title: Maine HCUP
DOI: 10.57761/bpvs-7y03
title: item_metadata
DOI: 10.15468/dl.7f6cfk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Micrasterias C.Agardh ex Ralfs, 1848",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.2855 -34.7533,20.509 -34.5676,20.509 -32.9007,17.7723 -32.9007,17.8156 -33.0786,18.3471 -33.7176,18.3748 -33.8287,18.2181 -34.0492,18.3197 -34.3408,18.4452 -34.429,18.5435 -34.4213,18.5872 -34.3667,18.5363 -34.167,18.7345 -34.1508,18.7216 -34.3637,18.7808 -34.4521,19.0289 -34.4206,19.0831 -34.4835,19.2655 -34.5017,19.2032 -34.6157,19.2394 -34.6926,19.375 -34.6963,19.6091 -34.8524,19.8251 -34.8396,19.9798 -34.9064,20.1081 -34.8731,20.1517 -34.7847,20.2855 -34.7533))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060653-250525065834625/datasets/export for details.
DOI: 10.5522/04/27336816
title: Metadata from Lake Xochimilco sampling sites

description: A CSV file with the physical and chemical characteristics of Lake Xochimilco eDNA sampling sites. The file contains the values obtained for pH, temperature, dissolved oxygen, total dissolved solids, and electroconductivity. Organic pollutants such as nitrates, nitrites, phosphates, and others are also included. Data contained in the file were used in the bioinformatic pipelines that included established R packages such as <i>phyloseq</i> and <i>vegan</i>.
DOI: 10.5522/04/27336816.v1
title: Metadata from Lake Xochimilco sampling sites

description: A CSV file with the physical and chemical characteristics of Lake Xochimilco eDNA sampling sites. The file contains the values obtained for pH, temperature, dissolved oxygen, total dissolved solids, and electroconductivity. Organic pollutants such as nitrates, nitrites, phosphates, and others are also included. Data contained in the file were used in the bioinformatic pipelines that included established R packages such as <i>phyloseq</i> and <i>vegan</i>.
DOI: 10.60707/24vd-6m15
title: OREX-800150-12
DOI: 10.60707/g3vj-vh16
title: OREX-800150-12
DOI: 10.60707/2zn9-xg82
title: OREX-800150-12
DOI: 10.15468/dl.v8v8rk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Micrasterias C.Agardh ex Ralfs, 1848",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.628 -23.023,35.6007 -22.9702,35.6007 -23.165,35.628 -23.023))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060654-250525065834625/datasets/export for details.
DOI: 10.15468/dl.aewnrg
title: Occurrence Download

description: A dataset containing 14250 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abalistes stellatus (Anonymous, 1798)"
 ]
}

 The dataset includes 14250 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060655-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mtnfrh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Micrasterias C.Agardh ex Ralfs, 1848",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.6306 -23.844,35.6007 -23.8125,35.6007 -24.0157,35.6306 -23.844))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060657-250525065834625/datasets/export for details.
DOI: 10.15468/dl.4wcpya
title: Occurrence Download

description: A dataset listing the 5 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abalistes stellatus (Anonymous, 1798)"
 ]
}

 The dataset's 5 records were derived from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060650-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ejpp4p
title: Occurrence Download

description: A dataset containing 4128 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abbottina rivularis (Basilewsky, 1855)"
 ]
}

 The dataset includes 4128 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060658-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.peck6m
title: Occurrence Download

description: A dataset containing 88253 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Chalcomitra senegalensis (Linnaeus, 1766)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 88253 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060646-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3unqzc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Microcystis Lemmermann, 1907",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((30.0251 -31.3959,30.5701 -30.7329,30.5701 -28.5786,25.5395 -28.5786,25.5395 -32.9007,28.2048 -32.9007,28.5753 -32.6569,29.4902 -31.7517,30.0251 -31.3959))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060659-250525065834625/datasets/export for details.
DOI: 10.15468/dl.mpf3kg
title: Occurrence Download

description: A dataset containing 4101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (United States of America, Canada)",
 "OccurrenceStatus is Present",
 "TaxonKey is Mitella L.",
 "Year 2000-2021"
 ]
}

 The dataset includes 4101 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174206-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d8xe8m
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-102.22725 17.962,-100.67524 16.83548,-98.38005 16.22981,-98.03552 18.33524,-99.91241 18.89655,-101.44894 19.01996,-102.22725 17.962))",
 "TaxonKey is one of (Echeveria alata Alexander, Thompsonella mixtecana J.Reyes & L.G.López, Sedum ebracteatum Moc. & Sessé ex DC., Echeveria chiapensis Rose)"
 ]
}

 The dataset includes 9 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000948-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fp78wz
title: Occurrence Download

description: A dataset containing 11985 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-69.61771 -18.66321,-81.07045 -51.36306,-67.45682 -56.44723,-71.34643 -46.24556,-66.80855 -23.50037,-69.61771 -18.66321))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lepidoptera"
 ]
}

 The dataset includes 11985 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0204575-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wjms49
title: Occurrence Download

description: A dataset containing 3860 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Impatiens textorii Miq."
 ]
}

 The dataset includes 3860 records from 116 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0252790-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.madx2x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Araecerus ishigakiensis Morimoto, 1978",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222771-220831081235567/datasets/export for details.
DOI: 10.48579/pro/397dwc
title: Morphological, locomotor performance and immunity measurments in Lissotriton helveticus

description: Running and swimming locomotor performances, morphological and immunity measurements in Lissotriton helveticus. This dataframe include all the raw data.
DOI: 10.48579/pro/397dwc/mgjnr1
title: Data.tab

description: :unav
DOI: 10.15468/dl.q68jg6
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Impatiens tricarinata H.Perrier"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0252806-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.