cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28649231
title: Fawaz_2025_TNF_luminex_data

description: Kidney transplantation is the best treatment for end-stage kidney disease as it improves life-expectancy and quality of life. Deceased donation following brain death and after circulatory death are the main source of transplants. Deceased donation, with a sequence of donor management and organ procurement steps, may contribute to donor organ injury through triggering systemic inflammation. Despite the important clinical implications, the impact of donor circulating inflammation on kidney function and short- and long-term posttransplant outcomes are unknown. In this study, we profiled tumor necrosis factor alpha (TNFα), and receptors TNFR1 and TNFR2 levels in 945 longitudinal plasma samples, including a validation cohort, collected during donor management of 523 deceased and 34 living donors from multiple centres across the United Kingdom. We demonstrated that during donor management, longitudinal TNF profiles were donor type specific. High donor TNFα plasma levels during donor management were independently associated with inferior 12 months and up to 96 months reduced graft function and survival in recipients. Deceased donors with high levels of circulatory TNFα had increased kidney expression of markers of inflammation and apoptosis prior to retrieval. Further <i>in vitro</i> investigations confirmed that donor plasma rich in TNFα promoted inflammation in human podocytes through TNFR1 signaling, a response that was ameliorated by infliximab, a TNFα specific neutralising antibody. Thus, our study suggests that monitoring plasma inflammation levels offers the potential to better assess and optimize deceased donor kidneys pretransplant, providing opportunities to improve donor kidney quality and extend graft longevity in recipients.
DOI: 10.6084/m9.figshare.28649231.v4
title: Fawaz_2025_TNF_luminex_data

description: Kidney transplantation is the best treatment for end-stage kidney disease as it improves life-expectancy and quality of life. Deceased donation following brain death and after circulatory death are the main source of transplants. Deceased donation, with a sequence of donor management and organ procurement steps, may contribute to donor organ injury through triggering systemic inflammation. Despite the important clinical implications, the impact of donor circulating inflammation on kidney function and short- and long-term posttransplant outcomes are unknown. In this study, we profiled tumor necrosis factor alpha (TNFα), and receptors TNFR1 and TNFR2 levels in 945 longitudinal plasma samples, including a validation cohort, collected during donor management of 523 deceased and 34 living donors from multiple centres across the United Kingdom. We demonstrated that during donor management, longitudinal TNF profiles were donor type specific. High donor TNFα plasma levels during donor management were independently associated with inferior 12 months and up to 96 months reduced graft function and survival in recipients. Deceased donors with high levels of circulatory TNFα had increased kidney expression of markers of inflammation and apoptosis prior to retrieval. Further <i>in vitro</i> investigations confirmed that donor plasma rich in TNFα promoted inflammation in human podocytes through TNFR1 signaling, a response that was ameliorated by infliximab, a TNFα specific neutralising antibody. Thus, our study suggests that monitoring plasma inflammation levels offers the potential to better assess and optimize deceased donor kidneys pretransplant, providing opportunities to improve donor kidney quality and extend graft longevity in recipients.
DOI: 10.6084/m9.figshare.28649231.v5
title: Fawaz_2025_TNF_luminex_data

description: Kidney transplantation is the best treatment for end-stage kidney disease as it improves life-expectancy and quality of life. Deceased donation following brain death and after circulatory death are the main source of transplants. Deceased donation, with a sequence of donor management and organ procurement steps, may contribute to donor organ injury through triggering systemic inflammation. Despite the important clinical implications, the impact of donor circulating inflammation on kidney function and short- and long-term posttransplant outcomes are unknown. In this study, we profiled tumor necrosis factor alpha (TNFα), and receptors TNFR1 and TNFR2 levels in 945 longitudinal plasma samples, including a validation cohort, collected during donor management of 523 deceased and 34 living donors from multiple centres across the United Kingdom. We demonstrated that during donor management, longitudinal TNF profiles were donor type specific. High donor TNFα plasma levels during donor management were independently associated with inferior 12 months and up to 96 months reduced graft function and survival in recipients. Deceased donors with high levels of circulatory TNFα had increased kidney expression of markers of inflammation and apoptosis prior to retrieval. Further <i>in vitro</i> investigations confirmed that donor plasma rich in TNFα promoted inflammation in human podocytes through TNFR1 signaling, a response that was ameliorated by infliximab, a TNFα specific neutralising antibody. Thus, our study suggests that monitoring plasma inflammation levels offers the potential to better assess and optimize deceased donor kidneys pretransplant, providing opportunities to improve donor kidney quality and extend graft longevity in recipients.
DOI: 10.13020/sq0x-ya83
title: Naturalistic open-source pedestrian-driver yielding dataset collected in Minnesota

description: The data collection took place at 18 intersections in Minnesota. Data collection was conducted at 18 sites across Minnesota to capture various road types, and intersection features during the summer months. The TIMs were deployed to each location for between one and two weeks, and video was recorded during daylight hours only. The Minnesota Traffic Observatory (MTO) used the Traffic Information Monitors (TIMs) to collect video data at each site. Raw video data will be available upon request. The collected video data is reduced to numeric data using both video processing techniques and manual data extraction.
DOI: 10.15468/dl.mu6r9s
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula antonii Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((32.064 -28.9416,32.4847 -28.5786,30.5701 -28.5786,30.5701 -30.7329,30.6252 -30.6659,31.4179 -29.4257,31.8178 -29.0299,32.064 -28.9416))"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060856-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xxhrwh
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula antonii Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.5808 -24.13,35.5909 -24.0715,30.5701 -24.0715,30.5701 -28.5786,32.4847 -28.5786,32.55 -28.5222,33.0346 -26.8668,32.9741 -26.7838,33.0415 -26.059,32.9304 -26.0011,32.7994 -26.1281,32.6834 -26.0015,32.813 -25.8728,32.8513 -25.7166,33.3048 -25.3731,35.1489 -24.6699,35.5808 -24.13))"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060857-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xhc2yt
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula antonii Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((31.8862 -21.3285,30.5701 -20.3186,30.5701 -24.0715,35.5909 -24.0715,35.6007 -24.0157,35.6007 -23.8125,35.4969 -23.7035,35.6007 -23.165,35.6007 -22.9702,35.227 -22.2482,34.6862 -21.6944,34.013 -21.3095,33.5 -21.1593,32.9675 -21.1092,32.4352 -21.1612,31.8862 -21.3285))"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060858-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pk5edr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula antonii Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((27.1586 -33.5889,28.2048 -32.9007,25.5395 -32.9007,25.5395 -34.1098,25.6468 -34.1222,25.7787 -34.0734,25.7098 -33.9109,25.8639 -33.797,26.4806 -33.8473,27.1586 -33.5889))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060859-250525065834625/datasets/export for details.
DOI: 10.15468/dl.fp8e6b
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula antonii Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((18.2339 -32.5266,18.1411 -32.657,18.1007 -32.7021,18.0224 -32.6366,17.8923 -32.6419,17.754 -32.8255,17.7723 -32.9007,20.509 -32.9007,20.509 -28.5786,16.2782 -28.5786,16.4358 -28.7202,16.726 -29.1235,17.1957 -30.3752,17.6655 -31.1743,18.1322 -31.7679,18.2495 -32.2638,18.2339 -32.5266))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060860-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cuqa5g
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula antonii Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((15.6372 -28.0032,16.2782 -28.5786,20.509 -28.5786,20.509 -24.0715,15.4933 -24.0715,15.4945 -24.1257,16.0509 -25.6631,15.6372 -28.0032))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060861-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.neygj5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula antonii Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((15.4784 -23.4046,15.4933 -24.0715,20.509 -24.0715,20.509 -24.0455,20.0952 -23.5072,19.9968 -23.017,19.7843 -22.5405,19.1988 -21.8785,18.5972 -21.5447,17.8859 -21.3993,17.1626 -21.4805,16.5332 -21.7596,16.1257 -22.0882,15.8234 -22.4662,15.606 -22.8993,15.4784 -23.4046))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060862-250525065834625/datasets/export for details.
DOI: 10.15468/dl.kkcc96
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula antonii Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -28.5786,20.509 -28.5786,20.509 -32.9007,25.5395 -32.9007,25.5395 -28.5786))"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060863-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5065/2pzw-6c23
title: ICARUS Chamber Experiment: Jimenez Lab_20160816_1-octanol/1-DECANOL/Methyl nitrite/nitric oxide/1-DODECANOL_Hydroxyl radical_Ammonium sulfate_18.6_ug/m3_AS3

description: Goals: Fast burst photooxidation of alkanols (high-NOx). Gas-aerosol-wall partitioning kinetics. Determine accommodation coefficient (alpha) and effective volatility under differing seed aerosol types (differing phase and polarities, inorganic/organic, humid/dry, standards/SOA).Summary: Alkanols, Methyl nitrite, NO, and particle seed added to chamber, UV lights turned on for 10 sec, multifunctional products formed. In most experiments in this experimental set, 10-second UV light/photochemistry burst repeated a few times. SMPS measurements of particle size distributions were conducted to determine particle formation, surface area and condensational sink rate coefficients. Gas-phase chemical species were measured with nitrate CIMS.Organization: Jimenez Lab Lab Affiliation: University of Colorado, Boulder Chamber: 1-White (1W)Experiment Category: Volatility and partitioning Oxidant: Hydroxyl radical Reactants: 1-octanol, 1-DECANOL, Methyl nitrite, nitric oxide, 1-DODECANOL Reaction Type: Photooxidation Relative Humidity: less than 1 Temperature: 25 Seed Name: Ammonium sulfate
DOI: 10.34740/kaggle/dsv/12232544
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.qq6w8b
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula antonii Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.7576 -24.3688,20.529 -24.0715,20.509 -24.0715,20.509 -28.5786,25.5395 -28.5786,25.5395 -24.0715,25.1306 -24.0715,24.9333 -24.4571,23.8962 -24.2467,22.8065 -24.295,22.3719 -24.7207,22.2323 -25.547,22.0387 -25.7188,21.7833 -25.7784,21.5388 -25.7113,21.3553 -25.5415,20.7576 -24.3688))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060864-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pkbzdc
title: Occurrence Download

description: A dataset containing 19854 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-75.37445 9.49559,-75.24231 9.49559,-75.24231 9.63703,-75.37445 9.63703,-75.37445 9.49559))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Animalia, Plantae)"
 ]
}

 The dataset includes 19854 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060865-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g7jpvn
title: Occurrence Download

description: A dataset containing 1395 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Metallura baroni Salvin, 1893"
 ]
}

 The dataset includes 1395 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060866-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6f5hhq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula antonii Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.529 -24.0715,20.509 -24.0455,20.509 -24.0715,20.529 -24.0715))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060867-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.29374298
title: Stroke Excel Sheet Data

description: We looked back at 271 stroke patients at our hospital to see if there were any differences between men and women. We found that women were generally older and had more disability before their stroke. Younger women (aged 31–60) tended to have more severe strokes than men in the same age group. Overall, recovery after stroke was pretty similar for both sexes, but women were a bit more likely to be considered for early palliative care. Our results suggest it’s important to keep sex differences in mind when treating stroke patients
DOI: 10.6084/m9.figshare.29371658
title: Stroke Research results

description: We looked back at 271 stroke patients at our hospital to see if there were any differences between men and women. We found that women were generally older and had more disability before their stroke. Younger women (aged 31–60) tended to have more severe strokes than men in the same age group. Overall, recovery after stroke was pretty similar for both sexes, but women were a bit more likely to be considered for early palliative care. Our results suggest it’s important to keep sex differences in mind when treating stroke patients
DOI: 10.6084/m9.figshare.29371658.v1
title: Stroke Research results

description: We looked back at 271 stroke patients at our hospital to see if there were any differences between men and women. We found that women were generally older and had more disability before their stroke. Younger women (aged 31–60) tended to have more severe strokes than men in the same age group. Overall, recovery after stroke was pretty similar for both sexes, but women were a bit more likely to be considered for early palliative care. Our results suggest it’s important to keep sex differences in mind when treating stroke patients
DOI: 10.6084/m9.figshare.29374298.v1
title: Stroke Excel Sheet Data

description: We looked back at 271 stroke patients at our hospital to see if there were any differences between men and women. We found that women were generally older and had more disability before their stroke. Younger women (aged 31–60) tended to have more severe strokes than men in the same age group. Overall, recovery after stroke was pretty similar for both sexes, but women were a bit more likely to be considered for early palliative care. Our results suggest it’s important to keep sex differences in mind when treating stroke patients
DOI: 10.15468/dl.yyr2x9
title: Occurrence Download

description: A dataset containing 188 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Mexico, United States of America)",
 "Geometry POLYGON((-98.41794 17.76119,-80.90934 17.76119,-81.2741 30.71026,-98.34499 30.60083,-98.41794 17.76119))",
 "TaxonKey is Globicephala macrorhynchus Gray, 1846"
 ]
}

 The dataset includes 188 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060868-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h8xnjh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula antonii Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -23.2724,25.1306 -24.0715,25.5395 -24.0715,25.5395 -23.2724))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060870-250525065834625/datasets/export for details.
DOI: 10.7267/9z9038078
title: Dataset Used for Signal Controller in The Loop Simulation
DOI: 10.15468/dl.v2wkhc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Navicula antonii Lange-Bertalot",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((20.2855 -34.7533,20.509 -34.5676,20.509 -32.9007,17.7723 -32.9007,17.8156 -33.0786,18.3471 -33.7176,18.3748 -33.8287,18.2181 -34.0492,18.3197 -34.3408,18.4452 -34.429,18.5435 -34.4213,18.5872 -34.3667,18.5363 -34.167,18.7345 -34.1508,18.7216 -34.3637,18.7808 -34.4521,19.0289 -34.4206,19.0831 -34.4835,19.2655 -34.5017,19.2032 -34.6157,19.2394 -34.6926,19.375 -34.6963,19.6091 -34.8524,19.8251 -34.8396,19.9798 -34.9064,20.1081 -34.8731,20.1517 -34.7847,20.2855 -34.7533))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060871-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.28282838
title: Neuropixels data from SOM-Cre and DNMT1-KO mice

description: This is an accompanying dataset with electrophysiological recordings for the study by Reichard et al 2024. The repo contains Neuropixels recordings from 4 mice that are either SOM-Cre or SOM-DNMT1-KO animals. Each recording contains pre-processed LFP and spiking data that was used to create the electrophysiological results of the study.For a complete description of the dataset and the results see the published study DNMT1-Mediated Regulation of Inhibitory Interneuron Migration Impacts Cortical Architecture and function<br>https://doi.org/10.1101/2024.09.04.611268