cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17026/dans-x22-fc2v
title: Biodiversity and climate determine the functioning of Neotropical forests

description: Tropical forests account for a quarter of the global carbon storage and a third of the terrestrial productivity. Few studies have teased apart the relative importance of environmental factors and forest attributes for ecosystem functioning, especially for the tropics. This study aims to relate aboveground biomass (AGB), biomass dynamics (i.e., net biomass productivity and its underlying demographic drivers: biomass recruitment, growth and mortality) to forest attributes (tree diversity, community-mean traits, and stand basal area) and environmental conditions (water availability, soil fertility and disturbance).We used data from 26 sites, 201 one-ha plots and 92,000 trees distributed across the Neotropics. We quantified for each site water availability and soil total exchangeable bases and for each plot three key community-weighted mean functional traits that are important for biomass stocks and productivity. We used structural equation models to test the hypothesis that all drivers have independent, positive effects on biomass stocks and dynamics.Of the relationships analysed, vegetation attributes were more frequently significantly associated with biomass stocks and dynamics than environmental conditions (in 67% versus 33% of the relationships). High climatic water availability increased biomass growth and stocks, light disturbance increased biomass growth, and soil bases had no effect. Rarefied tree species richness had consistent positive relationships with biomass stocks and dynamics, probably because of niche complementarity, but was not related to net biomass productivity. Community-mean traits were good predictors of biomass stocks and dynamics.Water availability has a strong positive effect on biomass stocks and growth, and a future predicted increase in (atmospheric) drought might, therefore, potentially reduce carbon storage. Forest attributes – including species diversity and community-weighted mean traits – have independent and important relationships with AGB stocks, dynamics, and ecosystem functioning, not only in relatively simple temperate systems, but also in structurally complex hyper-diverse tropical forests.
DOI: 10.17026/dans-zf2-vavp
title: SUPPLEMENTARY DATA for Effect of flavanols on bone turnover markers in individuals with type 2 diabetes – a 3-month randomized placebo-controlled FLAVA trial

description: Subjects with type 2 diabetes mellitus (T2DM) have increased fracture risk with higher bone mineral density, possibly related to increased advanced glycation end-products (AGEs) accumulation. Studies showed reduced AGEs formation and improved bone markers when treated with flavanols but not in subjects with T2DM.Aim;To study the effect of flavanols supplementation on bone turnover markers (BTMs) in participants with T2DM.
DOI: 10.17026/dans-zjn-dn5b
title: Forest structure drives changes in light heterogeneity during tropical secondary forest succession

description: This dataset contains the data on light measures and structural attributes in Neotropical secondary forests in Mexico.
DOI: 10.17026/dans-xxs-59hu
title: Monthly leaf area index generated using Sentinel-2 for Europe, in 2020

description: Monthly Leaf Area Index (LAI) products with a 20-meter resolution were generated using Sentinel-2 data for 2020 at the European scale, applying an enhanced vegetation index (EVI)-based model as an empirical approach. Further, the LAI products were resampled to 1Km to be applied as an input for estimating Net Primary Productivity using the LPJ-GUESS model as the deliverable for the EO4Diversity project funded by the European Space Agency (ESA).
DOI: 10.17026/dans-xvx-ys47
title: Dermatological guidelines for monitoring methotrexate treatment reduce drug-survival compared to rheumatological guidelines

description: Contains the raw data used for study titled: Dermatological guidelines for monitoring methotrexate treatment reduce drug-survival compared to rheumatological guidelinesNote: Excel file has password to prevent unwanted changes in the data. The file is accessible on Read only mode.
DOI: 10.17026/dans-zr6-atf9
title: Request for organ donation without donor registration

description: In the Netherlands, consent from relatives is obligatory for post mortal donation. This study explored the perspectives of relatives regarding the request for consent for donation in cases without donor registration. The dataset contains the Secondary analysis of data of a group of relatives of eligible brain dead organ donors.ResultsRelatives of unregistered, brain-dead patients usually refuse consent for donation, even if they harbour pro-donation attitudes themselves, or knew that the deceased favoured organ donation. Half of those who refused consent for donation mentioned afterwards that it could have been an option. The decision not to consent to donation is attributed to contextual factors, such as feeling overwhelmed by the notification of death immediately followed by the request; not being accustomed to speaking about death; inadequate support from other relatives or healthcare professionals , and lengthy procedures.
DOI: 10.17026/dans-z9n-vndw
title: Context-dependent responses of naïve ungulates to wolf-sound playback in a human-dominated landscape

description: This dataset belongs to the paper:Weterings et al. (2022) Context-dependent responses of naïve ungulates to wolf-sound playback in a human-dominated landscape. Animal Behaviour 185(2):9-20DOI: 10.1016/j.anbehav.2021.12.013
DOI: 10.17026/dans-xey-2vwv
title: Paliatieve spoedzorg door de huisarts in avond, nacht en weekend

description: Ondanks pogingen om de palliatieve huisartsen spoedzorg in de avond nacht en weekend (ANW) te verbeteren, zijn er signalen dat de kwaliteit toch achterblijft. Het is echter onbekend of dit door patiënten, mantelzorgers en professionals ook zo wordt beleefd en of er regionale palliatieve spoedzorg "best practices" zijn waarvan geleerd kan worden.Doel• Inventariseren van sterke- en voor verbetering vatbare onderdelen van de palliatieve spoedzorg in de avond nacht en weekend (ANW)• Optimale participatie van mantelzorgers en patiënten in palliatieve spoedzorg• Opsporen van best practices voor palliatieve spoedzorg• Ontwikkelen van implementatiematerialen t.b.v. verbetering van palliatieve spoedzorgEr is inventariserend multi-methoden onderzoek uitgevoerd, bestaande uit literatuuronderzoek, inventariserende gespreksgroepen en vragenlijstonderzoek onder huisartsenposten, huisartsen, medisch specialisten, (gespecialiseerde) verpleegkundigen, vrijwilligers en mantelzorgers.
DOI: 10.17026/dans-znu-5fyx
title: HANDS - Illusion of movement induced by tendon vibration on healthy subject

description: HANDS - Illusion of movement induced by tendon vibration on healthy subject
DOI: 10.17026/dans-x59-warf
title: Data for: Relief of phosphate limitation stimulates methane oxidation

description: Dataset for the paper "Relieve of phosphate limitation stimulates methane oxidation". The dataset includes raw data from microcosm incubations, methane oxidation rates, bacterial N and P content, and copy number of different types of methane-oxidizing bacteria (MOB) from microcosm incubations.
DOI: 10.17026/dans-zad-tkcg
title: Impact of a patient-flow physician coordinator on waiting times and length of stay in an emergency department: a before-after cohort study

description: The study primary objective was to evaluate the impact of a patient-flow physician coordinatol (PFPC) on the proportion of patients having medical assessment within SETS-imposed time limits. Its secondary objectives were to evaluate PFPC's impact on waiting times until medical assessment, length of stay in the ED, and on the number of patients leaving without being seen.
DOI: 10.17026/dans-zf9-xwzp
title: Access to Beira PED from April 2017 to March 2018

description: We retrospectively reviewed Pediatric Emergency Department presentations to the "Hospital Central da Beira" between April 2017 and March 2018.
DOI: 10.17026/dans-z8r-g8w7
title: Schizophrenia and cognitive impairment: MOCA and Premorbid Adjustment Scale values in a Mexican population

description: A small sample of schizophrenia patients from south of Mexico and their values of MOCA (Montreal Cognitive Assessment) and Premorbid Adjustment Scale
DOI: 10.17026/dans-xhp-qbjg
title: Shortness of breath in children at the emergency department: variability in management in Europe

description: database
DOI: 10.17026/dans-zjh-9ae3
title: Experiences of Dutch maternity care professionals during the first wave of COVID-19 in a community based maternity care system

description: This study researches the experiences of maternity care professionals with changes caused by the COVID-19 pandemic and provides suggestions for the organization of care during and after pandemics. The study design is an online survey among Dutch midwives, obstetricians and obstetric residents.
DOI: 10.5281/zenodo.10255839
title: NorHand v3 / Dataset for Handwritten Text Recognition in Norwegian

description: This dataset comprises Norwegian letter and diary documents from 19th and early 20th century. It can be used to train Handwritten Text Recognition (HTR) models.
DOI: 10.5281/zenodo.10255840
title: NorHand v3 / Dataset for Handwritten Text Recognition in Norwegian

description: This dataset comprises Norwegian letter and diary documents from 19th and early 20th century. It can be used to train Handwritten Text Recognition (HTR) models.
DOI: 10.17026/dans-22p-bjup
title: Evidence-based advice on timing and location of tsetse control measures in Shimba Hills National Reserve, Kenya

description: This tsetse locational data was utilized to investigate if satellite-derived environmental factors and weather data could explain the abundance of G. pallidipes around the Shimba Hills National Reserve in Kwale County, Kenya. Our findings revealed that tsetse fly numbers were consistently high within a distance of less than 1.0 km from the reserve. Beyond that distance, tsetse fly numbers increased after 30 days of increased rainfall and the following increase in vegetation greenness (NDVI). However, if rainfall persisted for more than a month, tsetse fly numbers started to decline.
DOI: 10.17026/dans-xhj-pxyt
title: Attitude Change during Medical Education: Comparing Addiction, Dementia, and Diabetes

description: This dataset contains the data of an observational prospective cohort study. This study evaluates medical students’ attitudes towards addiction, dementia, and diabetes. Participants were sixth year medical students of the Radboud University Medical Center (Radboudumc). They were recruited from the training in the Primary and Community Care from February 2016 – January 2017. The attitudes were measured three times during this training, using the Medical Condition Regard scale (MCRS).
DOI: 10.17026/dans-xas-6hts
title: Plant-soil feedback is shut down when nutrients come to town

description: A plant-soil feedback experiment was performed with the grasses Anthoxanthum odoratum and Festuca rubra, and the forbs Leontodon hispidus and Plantago lanceolata, on soil with either low or high nutrient availability. Additionally, we tested if plant-soil feedback of the two forbs under these conditions changed by inoculation of the soil with spores of an arbuscular mycorrhizal fungus.
DOI: 10.17026/dans-x3n-7g4d
title: Dataset belonging to the manuscript entitled: It's about time: Linkages between heat tolerance, thermal acclimation and metabolic rate at diﬀerent temporal scales in the freshwater amphipod Gammarus fossarum Koch, 1836

description: This dataset contains raw data of respiration, survival and thermal sensitivity of respiration and survival of cold and warm acclimated amphipods used for analyses and figures in the research described in the Journal of Thermal Biology: It's about time: Linkages between heat tolerance, thermal acclimation and metabolic rate at diﬀerent temporal scales in the freshwater amphipod Gammarus fossarum Koch, 1836. (2018) by Semsar-kazerouni and Verberk. In this paper, we examined the effect of temperature acclimation on heat tolerance and metabolism in the aquatic ectotherm Gammarus fossarum. Details about the experimental procedures are given in the Materials and Methods section of the paper. We have also included the R scripts for data analyses in this dataset. A brief description of the data files and column descriptions can be found below.
DOI: 10.17026/dans-zd5-uufj
title: Dispersal and interface behaviour of carabid beetles in a landscape mosaic: Field study plus model selection

description: This dataset contains the data on displacement distances of Pterostichus melanarius beetles in a mark-recapture experiment on a spatial grid of traps in a small agricultural landscape mosaic with accompanying data on density of the naturally occuring P. melanarius population and the body mass and size of these beetles. Aim of the study was to identify how motility and behaviour at interfaces jointly affect redistribution in a complex spatial setting.
DOI: 10.17026/dans-xen-k8a8
title: The Effects of Context and Attention on Spiking Activity in Human Early Visual Cortex

description: MRI/CT images from the PLoS Biology paper with the above title.Paper abstract:Here we report the first quantitative analysis of spiking activity in human early visual cortex. We recorded multi-unit activity from two electrodes in area V2/V3 of a human patient implanted with depth electrodes as part of her treatment for epilepsy. We observed well-localized multi-unit receptive fields with tunings for contrast, orientation, spatial frequency, and size, similar to those reported in the macaque. We also observed pronounced gamma oscillations in the local-field potential that could be used to estimate the underlying spiking response properties. Spiking responses were modulated by visual context and attention. We observed orientation-tuned surround suppression: responses were suppressed by image regions with a uniform orientation and enhanced by orientation contrast. Additionally, responses were enhanced on regions that perceptually segregated from the background, indicating that neurons in the human visual cortex are sensitive to figure-ground structure. Spiking responses were also modulated by object-based attention. When the patient mentally traced a curve through the neurons’ receptive fields, the accompanying shift of attention enhanced neuronal activity. These results demonstrate that the tuning properties of cells in the human early visual cortex are similar to those in the macaque and that responses can be modulated by both contextual factors and behavioral relevance. Our results, therefore, imply that the macaque visual system is an excellent model for the human visual cortex.
DOI: 10.17026/dans-x86-6cf3
title: Data underlying the publication: "Branching responses to pruning in young cocoa trees"

description: The branching pattern of a tree determines the efficiency of light interception and carbon assimilation. Pruning can modify the branching pattern, because of changes in physiological and environmental conditions,and ultimately pruning can have major effects on yield. For one of the major tropical tree crops, cocoa (Theobroma cacao), very little is known about branching response to pruning.To address this knowledge gap, we performed a pruning experiment on young cocoa trees in Côte d’Ivoire.We applied five treatments: two heading treatments (the removal of the terminal apex or 66% of a primary branch) and two thinning treatments (the removal of 1 or 2 primary branches) and one unpruned control.The secondary-branching pattern of the primary branches was described by the number, position, and length of secondary branches right after pruning, and the same observations were repeated after a cycleof leaf production. The probability of branching and the length of secondary branches along a primary branch, in pruned and unpruned conditions, was analyzed using generalized mixed effect models.In unpruned conditions, the probability of secondary-branch presence was higher towards the middle of the primary branches and lower at the extremes.Secondary-branch length decreased going from the base to the tip of a primary branch. After one cycle of leaf production, new secondary branches emerged preferentially on the distal section of a primary branch,but probability of branch emergence was reduced by the presence of other secondary branches. Pruning increased the probability of branch emergence mostly towards the tip of a primary branch,with heavy heading having the strongest effect. By contrast, heavy thinning increased branch emergence also toward the base of the primary branch.Our results can be applied to improve formation pruning, as this may trigger branching in different parts of the crown, depending on the form of pruning. Our study also assists the development ofthree-dimensional tree models that could further our understanding of the impact of pruning on cocoa growth and productivity.
DOI: 10.17026/dans-23g-ht8x
title: Data "What are the costs of learning? - Modest trade-offs and constitutive costs do not set the price of fast associative learning ability in a parasitoid wasp"

description: Data of the accepted paper "What are the costs of learning? - Modest trade-offs and constitutive costs do not set the price of fast associative learning ability in a parasitoid wasp" in Animal Cognition.As part of a larger project exploring the evolutionary processes involved in learning ability, this paper focussed on the constitutive costs involved with rapid associative learning ability. A range of possible traits that could trade-off with learning ability were measured in selected lines of the parasitoid wasps Nasonia vitripennis selected for rapid learning ability.
DOI: 10.5281/zenodo.10210305
title: Data accompanying "Fractional quantum Hall states with variational Projected Entangled-Pair States: a study of the bosonic Harper-Hofstadter model"
DOI: 10.5281/zenodo.10210304
title: Data accompanying "Fractional quantum Hall states with variational Projected Entangled-Pair States: a study of the bosonic Harper-Hofstadter model"
DOI: 10.17026/dans-zzg-mjgb
title: Genome analyses of resistance-breaking isolates of the spinach downy mildew Peronospora effusa

description: Genome analyses of resistance-breaking isolates of the spinach downy mildew Peronospora effusa
DOI: 10.5281/zenodo.6583318
title: Training and test data, plus saved models for the paper "Top-down inference in an early visual cortex inspired hierarchical Variational Autoencoder" submitted to NeurIPS 2022

description: Each file is in the pickle format and was generated with Python 3.8.5. Each file contains a Python dictionary with the following fields: 'train_images': 640,000 float32 images used for model training. 20px images contain 400 pixel intensities, 40px images contain 1600 pixel intensities each. 'train_labels': float32 labels for each image in 'train_images'. All natural images are labeled with 0.0. Texture images are labeled with 0.0, 1,0, 2.0, 3.0, or 4.0, according to their texture family. 'test_images': 64,000 float32 images used for model testing. 20px images contain 400 pixel intensities, 40px images contain 1600 pixel intensities each. 'test_labels': float32 labels for each image in 'test_images'. All natural images are labeled with 0.0. Texture images are labeled with 0.0, 1,0, 2.0, 3.0, or 4.0, according to their texture family. For more details, see the paper "Top-down inference in an early visual cortex inspired hierarchical Variational Autoencoder" submitted to NeurIPS 2022 (to be published soon on arXiv.org). Details on saved models coming soon.
description: {"references": ["J Hans Van Hateren and Arjen van der Schaaf. Independent component filters of natural images compared445 with simple cells in primary visual cortex. Proceedings of the Royal Society of London. Series B: Biological446 Sciences, 265(1394):359\u2013366, 1998.", "Javier Portilla and Eero P Simoncelli. A parametric texture model based on joint statistics of complex430 wavelet coefficients. International journal of computer vision, 40(1):49\u201370, 2000.", "https://www.textures.com/", "Phil Brodatz. Textures: a photographic album for artists and designers. Dover publications, 1966.", "Gabriel Barello, Adam S Charles, and Jonathan W Pillow. Sparse-coding variational auto-encoders.355 bioRxiv, page 399246, 2018."]}
DOI: 10.17026/dans-293-he6k
title: Phenotypic features and the response to growth hormone treatment of patients with a molecular defect of the IGF-I receptor

description: This dataset contains the supplemental information to the manuscipt that describes the phenotypical features of 32 patients with a molecular defect of the IGF-I receptor. A clinical score is developed to select patients for genetic testting based on birth size, height, head circumference and IGF-I. The growth response to growth hormone therapy is evaluated.****Forthcoming publication: The paper related to this data will be published soon.
DOI: 10.5281/zenodo.6581773
title: Training and test data, plus saved models for the paper "Top-down inference in an early visual cortex inspired hierarchical Variational Autoencoder" submitted to NeurIPS 2022

description: Each file is in the pickle format and was generated with Python 3.8.5. Each file contains a Python dictionary with the following fields: 'train_images': 640,000 float32 images used for model training. 20px images contain 400 pixel intensities, 40px images contain 1600 pixel intensities each. 'train_labels': float32 labels for each image in 'train_images'. All natural images are labeled with 0.0. Texture images are labeled with 0.0, 1,0, 2.0, 3.0, or 4.0, according to their texture family. 'test_images': 64,000 float32 images used for model testing. 20px images contain 400 pixel intensities, 40px images contain 1600 pixel intensities each. 'test_labels': float32 labels for each image in 'test_images'. All natural images are labeled with 0.0. Texture images are labeled with 0.0, 1,0, 2.0, 3.0, or 4.0, according to their texture family. For more details, see the paper "Top-down inference in an early visual cortex inspired hierarchical Variational Autoencoder" submitted to NeurIPS 2022 (to be published soon on arXiv.org). Details on saved models coming soon.
description: {"references": ["J Hans Van Hateren and Arjen van der Schaaf. Independent component filters of natural images compared445 with simple cells in primary visual cortex. Proceedings of the Royal Society of London. Series B: Biological446 Sciences, 265(1394):359\u2013366, 1998.", "Javier Portilla and Eero P Simoncelli. A parametric texture model based on joint statistics of complex430 wavelet coefficients. International journal of computer vision, 40(1):49\u201370, 2000.", "https://www.textures.com/", "Phil Brodatz. Textures: a photographic album for artists and designers. Dover publications, 1966.", "Gabriel Barello, Adam S Charles, and Jonathan W Pillow. Sparse-coding variational auto-encoders.355 bioRxiv, page 399246, 2018."]}