cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.p5kk8
title: Data from: Genetic patterns across an invasion's history: a test of change versus stasis for the Eurasian round goby in North America

description: Biological invasions comprise accidental evolutionary experiments, whose
 genetic compositions underlie relative success, spread, and persistence in
 new habitats. However, little is known about whether, or how, their
 population genetic patterns change temporally and/or spatially across the
 invasion's history. Theory predicts that most would undergo founder
 effect, exhibit low genetic divergence across the new range, and gain
 variation over time via new arriving propagules. To test these
 predictions, we analyze population genetic diversity and divergence
 patterns of the Eurasian round goby Neogobius melanostomus across the two
 decades of its North American invasion in the Laurentian Great Lakes,
 comparing results from 13 nuclear DNA microsatellite loci and
 mitochondrial DNA cytochrome b sequences. We test whether “genetic
 stasis”, “genetic replacement”, and/or “genetic supplement” scenarios have
 occurred at the invasion's core and expansion sites, in comparison to
 its primary native source population in the Dnieper River, Black Sea.
 Results reveal pronounced genetic divergence across the exotic range, with
 population areas remaining genetically distinct and statistically
 consistent across two decades, supporting “genetic stasis” and “founder
 takes most”. The original genotypes continue to predominate, whose high
 population growth likely outpaced the relative success of later arrivals.
 The original invasion core has stayed the most similar to the native
 source. Secondary expansion sites indicate slight allelic composition
 convergence towards the core population over time, attributable to some
 early “genetic supplementation”. The geographic and temporal coverage of
 this investigation offers a rare opportunity to discern population
 dynamics over time and space in context of invasion genetic theory versus
 reality.
description: µsats_goby_Dryad-ARLEQUINMicrosattelite genotype data in Arlequin input formatCytB_goby_Dryad-ArlequinCytochrome b haplotype information in Arlequin input formatCoordinatesGeographic coordinates of sites included in study in Microsoft Excel workbook format
DOI: 10.15493/obsdb.0000.02da
title: Inorganic Carbon - pH, Actual, Potential of Hydrogen for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 03 between 7.03m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Inorganic Carbon - pH, Actual, Potential of Hydrogen for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 03 between 7.03m and 0.00m below sea level from 2021-02-05T12:28:59+02:00 to 2026-01-13T11:41:41+02:00 at -33.669080,26.672500 (+N-S,-W+E)
DOI: 10.15493/obsdb.0000.031d
title: Oxygen - Dissolved Oxygen, Actual, Milligrams per liter for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 12 between 2.58m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Oxygen - Dissolved Oxygen, Actual, Milligrams per liter for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 12 between 2.58m and 0.00m below sea level from 2021-02-05T11:44:07+02:00 to 2026-01-13T11:15:35+02:00 at -33.636380,26.644820 (+N-S,-W+E)
DOI: 10.15493/obsdb.0000.033e
title: Oxygen - Dissolved Oxygen, Actual, Milligrams per liter for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 17 between 2.34m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Oxygen - Dissolved Oxygen, Actual, Milligrams per liter for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 17 between 2.34m and 0.00m below sea level from 2021-02-05T11:01:58+02:00 to 2026-01-13T11:01:53+02:00 at -33.612320,26.632660 (+N-S,-W+E)
DOI: 10.5061/dryad.t732dt8
title: Data from: Quantifying the relative contributions of the X chromosome, autosomes, and mitochondrial genome to local adaptation

description: During local adaptation with gene flow, some regions of the genome are
 inherently more responsive to selection than others. Recent theory
 predicts that X-linked genes should disproportionately contribute to local
 adaptation relative to other genomic regions, yet this prediction remains
 to be tested. We carried out a multi-generation crossing scheme, using two
 cline-end populations of Drosophila melanogaster, to estimate the relative
 contributions of the X chromosome, autosomes and mitochondrial genome to
 adaptive divergence in four traits involved in local adaptation (wing
 size, and resistance to heat, desiccation, and starvation stresses). We
 found that the mitochondrial genome and autosomes contributed
 significantly to clinal divergence in three of the four traits. In
 contrast, the X made no significant contribution to divergence in these
 traits. Given the small size of the mitochondrial genome, our results
 indicate that it plays a surprisingly large role in clinal adaptation. In
 contrast, the X, which represents roughly 20% of the Drosophila genome,
 contributes negligibly – a pattern that conflicts with theoretical
 predictions. These patterns reinforce recent work implying a central role
 of mitochondria in climatic adaptation, and suggest that different genomic
 regions may play fundamentally different roles in processes of divergence
 with gene flow.
description: Dryad X-files
 dataRaw wing size, heat,
 desiccation and starvation resistance data.
DOI: 10.15493/obsdb.0000.0303
title: Salinity - Subsurface, Actual, Practical Salinity Unit for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 08 between 3.80m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Salinity - Subsurface, Actual, Practical Salinity Unit for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 08 between 3.80m and 0.00m below sea level from 2021-02-05T12:02:59+02:00 to 2026-01-13T11:26:07+02:00 at -33.648520,26.646100 (+N-S,-W+E)
DOI: 10.15493/obsdb.0000.032f
title: Salinity - Subsurface, Actual, Practical Salinity Unit for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 15 between 2.16m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Salinity - Subsurface, Actual, Practical Salinity Unit for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 15 between 2.16m and 0.00m below sea level from 2021-02-05T11:11:38+02:00 to 2026-01-13T11:07:05+02:00 at -33.625020,26.640880 (+N-S,-W+E)
DOI: 10.15493/obsdb.0000.02b6
title: Turbidity, Actual, Formazin Nephelometric Unit for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Biological 03 between 2.59m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Turbidity, Actual, Formazin Nephelometric Unit for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Biological 03 between 2.59m and 0.00m below sea level from 2021-02-05T09:29:10+02:00 to 2026-01-13T09:37:18+02:00 at -33.638930,26.643650 (+N-S,-W+E)
DOI: 10.5061/dryad.23r95
title: Data from: Stabilizing selection on sperm number revealed by artificial selection and experimental evolution

description: Sperm competition is taxonomically widespread in animals and is usually
 associated with large sperm production, being the number of sperm in the
 competing pool the prime predictor of fertilization success. Despite the
 strong postcopulatory selection acting directionally on sperm production,
 its genetic variance is often very high. This can be explained by
 trade-offs between sperm production and traits associated with mate
 acquisition or survival, that may contribute to generate an overall
 stabilizing selection. To investigate this hypothesis, we first
 artificially selected male guppies (Poecilia reticulata) for high and low
 sperm production for three generations, while simultaneously removing
 sexual selection. Then, we interrupted artificial selection and restored
 sexual selection. Sperm production responded to divergent selection in one
 generation, and when we restored sexual selection, both high and low lines
 converged back to the mean sperm production of the original population
 within two generations, indicating that sperm number is subject to strong
 stabilizing total sexual selection (i.e. selection acting simultaneously
 on all traits associated with reproductive success). We discuss the
 possible mechanisms responsible for the maintenance of high genetic
 variability in sperm production despite strong selection acting on it.
description: Sperm
 NumberPrecopulatory
 traits
DOI: 10.6084/m9.figshare.29610215
title: Data from "Successful frugivory interactions recovery 53 years after the reintroduction of the Ariel toucan (<i>Ramphastos ariel</i>) in the Atlantic forest."

description: Interaction_credit<br>This repository contains information related to the article <i>"</i>Successful frugivory interactions recovery 53 years after the reintroduction of the ariel toucan (<i>Ramphastos ariel</i>) in the Atlantic forest.<i>"</i> which analyzed the recovery of interactions following the reintroduction of <i>Ramphastos ariel</i> in Tijuca National Park using the ecological interaction credit model.<br>Repository structure<b>/Data</b><br><b>Inside the Raw folder:</b><b>Literature_review_frugivory_Ramphstos_Brazil:</b> Spreadsheet with results from the literature review on the genus <i>Ramphastos</i> in Brazil (2016–2023) and data from the Atlantic Frugivory database (1961–2016).<b>Inside the Processed folder:</b><b>Interaction_credit_TNP:</b> spreadsheet generated by combining the literature review data with the list of shrub-tree community species in Tijuca National Park, thereby creating a list of available and expected interactions for <i>R. ariel</i> in the park.<b>observed_interactions</b>: Spreadsheet that contains the interactions observed in the field—i.e., the interactions recovered after the reintroduction of <i>R. ariel</i>, based on the interaction credit spreadsheet (expected interactions).<b>/Script</b><br>1.<b> Credit_of_ecological_interactions_script:</b> Script for building the interaction credit graphs.<br>2<b>. general_rarefaction_curve:</b> Script for the accumulation curve considering all interactions together, regardless of seed size.<br>3.<b> toucan-rarefaction.R:</b> Script for accumulation curves.<br><b>/Output:</b><br>Figures included in the article, generated from the scripts listed above.
DOI: 10.6084/m9.figshare.29610215.v2
title: Data from "Successful frugivory interactions recovery 53 years after the reintroduction of the Ariel toucan (<i>Ramphastos ariel</i>) in the Atlantic forest."

description: Interaction_credit<br>This repository contains information related to the article <i>"</i>Successful frugivory interactions recovery 53 years after the reintroduction of the ariel toucan (<i>Ramphastos ariel</i>) in the Atlantic forest.<i>"</i> which analyzed the recovery of interactions following the reintroduction of <i>Ramphastos ariel</i> in Tijuca National Park using the ecological interaction credit model.<br>Repository structure<b>/Data</b><br><b>Inside the Raw folder:</b><b>Literature_review_frugivory_Ramphstos_Brazil:</b> Spreadsheet with results from the literature review on the genus <i>Ramphastos</i> in Brazil (2016–2023) and data from the Atlantic Frugivory database (1961–2016).<b>Inside the Processed folder:</b><b>Interaction_credit_TNP:</b> spreadsheet generated by combining the literature review data with the list of shrub-tree community species in Tijuca National Park, thereby creating a list of available and expected interactions for <i>R. ariel</i> in the park.<b>observed_interactions</b>: Spreadsheet that contains the interactions observed in the field—i.e., the interactions recovered after the reintroduction of <i>R. ariel</i>, based on the interaction credit spreadsheet (expected interactions).<b>/Script</b><br>1.<b> Credit_of_ecological_interactions_script:</b> Script for building the interaction credit graphs.<br>2<b>. general_rarefaction_curve:</b> Script for the accumulation curve considering all interactions together, regardless of seed size.<br>3.<b> toucan-rarefaction.R:</b> Script for accumulation curves.<br><b>/Output:</b><br>Figures included in the article, generated from the scripts listed above.
DOI: 10.15493/obsdb.0000.02e7
title: Turbidity, Actual, Formazin Nephelometric Unit for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 04 between 2.86m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Turbidity, Actual, Formazin Nephelometric Unit for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 04 between 2.86m and 0.00m below sea level from 2021-02-05T12:25:14+02:00 to 2026-01-13T11:38:50+02:00 at -33.668070,26.666140 (+N-S,-W+E)
DOI: 10.6084/m9.figshare.29610215.v1
title: Data from "Successful frugivory interactions recovery 53 years after the reintroduction of the ariel toucan in the Atlantic forest."

description: Interaction_credit<br>This repository contains information related to the article <i>"</i>Successful frugivory interactions recovery 53 years after the reintroduction of the ariel toucan (<i>Ramphastos ariel</i>) in the Atlantic forest.<i>"</i> which analyzed the recovery of interactions following the reintroduction of <i>Ramphastos ariel</i> in Tijuca National Park using the ecological interaction credit model.<br>Repository structure<b>/Data</b><br><b>Inside the Raw folder:</b><b>Literature_review_frugivory_Ramphstos_Brazil:</b> Spreadsheet with results from the literature review on the genus <i>Ramphastos</i> in Brazil (2016–2023) and data from the Atlantic Frugivory database (1961–2016).<b>Inside the Processed folder:</b><b>Interaction_credit_TNP:</b> spreadsheet generated by combining the literature review data with the list of shrub-tree community species in Tijuca National Park, thereby creating a list of available and expected interactions for <i>R. ariel</i> in the park.<b>observed_interactions</b>: Spreadsheet that contains the interactions observed in the field—i.e., the interactions recovered after the reintroduction of <i>R. ariel</i>, based on the interaction credit spreadsheet (expected interactions).<b>/Script</b><br>1.<b> Credit_of_ecological_interactions_script:</b> Script for building the interaction credit graphs.<br>2<b>. general_rarefaction_curve:</b> Script for the accumulation curve considering all interactions together, regardless of seed size.<br>3.<b> toucan-rarefaction.R:</b> Script for accumulation curves.<br><b>/Output:</b><br>Figures included in the article, generated from the scripts listed above.
DOI: 10.15493/obsdb.0000.02ce
title: Turbidity, Actual, Formazin Nephelometric Unit for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 01 between 2.70m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Turbidity, Actual, Formazin Nephelometric Unit for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 01 between 2.70m and 0.00m below sea level from 2021-02-05T12:44:24+02:00 to 2026-01-13T11:50:13+02:00 at -33.679780,26.680400 (+N-S,-W+E)
DOI: 10.15493/obsdb.0000.02b3
title: Turbidity, Actual, Formazin Nephelometric Unit for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Biological 02 between 4.61m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Turbidity, Actual, Formazin Nephelometric Unit for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Biological 02 between 4.61m and 0.00m below sea level from 2021-02-05T09:00:03+02:00 to 2026-01-13T09:08:34+02:00 at -33.661400,26.646230 (+N-S,-W+E)
DOI: 10.5061/dryad.v8dk1
title: Data from: Around the Mediterranean: an extreme example of loop migration in a long-distance migratory passerine

description: An important issue in migration research is how small-bodied passerines
 pass over vast geographical barriers; in European-African avian migration,
 these are represented by the Mediterranean Sea and the Sahara Desert.
 Eastern (passing Eastern Mediterranean), central (passing Apennine
 Peninsula) and western (via western Mediterranean) major migration flyways
 are distinguished for European migratory birds. The autumn and spring
 migration routes may differ (loop migration) and there could be a certain
 level of individual flexibility in how individuals navigate themselves
 during a single migration cycle. We used light-level loggers to map
 migration routes of barn swallows Hirundo rustica breeding in the centre
 of a wide putative contact zone between the north-eastern and
 southern-western European populations that differ in migration flyways
 utilised and wintering grounds. Our data documented high variation in
 migration patterns and wintering sites of tracked birds (n = 19
 individuals) from a single breeding colony, with evidence for loop
 migration in all but one of the tracked swallows. In general, two
 migratory strategies were distinguished. In the first, birds wintering in
 a belt stretching from south-central to southern Africa that used an
 eastern route for both the spring and autumn migration, then shifted their
 spring migration eastwards (anti-clockwise loops, n = 12). In the second,
 birds used an eastern or central route to their wintering grounds in
 central Africa, shifting the spring migration route westward (clockwise
 loops, n = 7). In addition, we observed an extremely wide clockwise loop
 migration encompassing the entire Mediterranean, with one individual
 utilising both the eastern (autumn) and western (spring) migratory flyway
 during a single annual migration cycle. Further investigation is needed to
 ascertain whether clockwise migratory loops encircling the entire
 Mediterranean also occur other small long-distance passerine species.
description: Geographical location of
 tracked barn swallowsThe file contains
 position of barn swallows Hirundo rustica (n=19). For position
 determination during migration cycle, we used light-level locators (type
 Intigeo-P55B1). Fieldwork was carried out in the period 2013-2015 in South
 Bohemia (48°59'6.619"N, 14°46'48.355"E), Czech
 Republic. For position determination we used R statistical package
 GeoLight 2.0.0, when we excluded the period ± 15-21 days around each
 equinox.locators_location.xls
DOI: 10.15493/obsdb.0000.0336
title: Sea Temperature - Subsurface, Actual, Degrees Celsius for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 16 between 2.11m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Sea Temperature - Subsurface, Actual, Degrees Celsius for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 16 between 2.11m and 0.00m below sea level from 2021-02-05T11:07:14+02:00 to 2026-01-13T11:04:38+02:00 at -33.620350,26.637280 (+N-S,-W+E)
DOI: 10.15493/obsdb.0000.02b4
title: Oxygen - Dissolved Oxygen Saturation, Actual, Percent for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Biological 03 between 2.59m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Oxygen - Dissolved Oxygen Saturation, Actual, Percent for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Biological 03 between 2.59m and 0.00m below sea level from 2021-02-05T09:29:10+02:00 to 2026-01-13T09:37:18+02:00 at -33.638930,26.643650 (+N-S,-W+E)
DOI: 10.5061/dryad.h435m
title: Data from: Oral bisphosphonates are associated with increased risk of atypical femoral fractures in elderly women

description: Objectives: To evaluate the association between bisphosphonate use and the
 risk of atypical femoral fractures among women aged 65 or older. Design:
 Nested case–control study. Setting: General practice research database in
 Spain. Exposures Use of oral bisphosphonates before the occurrence of
 atypical fractures among cases or the corresponding index date among
 controls. Bisphosphonate use was categorised as ever versus never users.
 Ever users were divided according to the total time since first
 prescription. Main outcome measures: Cases were defined as women aged
 65 years or older with a first diagnosis of subtrochanteric or diaphyseal
 fracture, recorded in the BIFAP database between 1 January 2005 and 31
 December 2008, and with at least 1 year of follow-up before the index
 date. For each case, five age-matched and calendar-year-matched controls
 without a history of hip or atypical fracture were randomly selected from
 the database. Statistical analysis: OR of atypical femoral fracture by
 bisphosphonate use was determined using conditional logistic regression.
 Models were adjusted for comorbidities and use of other medications.
 Results: The analysis included 44 cases and 220 matched controls (mean
 age, 82 years). Ever use of bisphosphonates was more frequent in cases
 than controls (29.6% vs 10.5%). In multivariate analyses, OR (95% CI) of
 atypical femoral fracture was 4.30 (1.55 to 11.9) in ever versus never
 users of bisphosphonates. The risk increased with long-term use, with an
 OR of 9.46 (2.17 to 41.3) comparing those using bisphosphonates over
 3 years versus no users (p for trend=0.01). Conclusions: Bisphosphonate
 use was associated with an increased risk of subtrochanteric or diaphyseal
 fractures in elderly women in a low fracture risk population, with a
 higher risk among long-term bisphosphonate users.
description: atypicalfractures
 databaseThis is a database for a
 case-control study nested in the Spanish database BIFAP (Base de Datos
 para la Investigación Farmacoepidemiológica en Atención Primaria, Database
 for Pharmacoepidemiologic Research in Primary Care). This is a
 longitudinal population-based database maintained by the Spanish Agency
 for Medicines and Medical Devices that collects, from 2001 onwards, the
 computerized medical records of &gt;3.2 million patients attended by more
 than 1,800 primary care physicians throughout Spain. It includes
 anonymized information on &gt;13.7 million person-years of follow
 up.
DOI: 10.15493/obsdb.0000.034d
title: Sea Temperature - Subsurface, Actual, Degrees Celsius for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 19 between 2.34m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Sea Temperature - Subsurface, Actual, Degrees Celsius for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 19 between 2.34m and 0.00m below sea level from 2021-02-05T10:53:39+02:00 to 2026-01-13T10:56:21+02:00 at -33.616510,26.650560 (+N-S,-W+E)
DOI: 10.15493/obsdb.0000.0339
title: Conductivity, Actual, MicroSiemens per centimetre for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 16 between 2.11m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Conductivity, Actual, MicroSiemens per centimetre for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 16 between 2.11m and 0.00m below sea level from 2021-02-05T11:07:14+02:00 to 2026-01-13T11:04:38+02:00 at -33.620350,26.637280 (+N-S,-W+E)
DOI: 10.15493/obsdb.0000.034e
title: Oxygen - Dissolved Oxygen, Actual, Milligrams per liter for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 19 between 2.34m and 0.00m below sea level from 2021-02-05 to 2026-01-13

description: Oxygen - Dissolved Oxygen, Actual, Milligrams per liter for Estuaries, Multiparameter Meters, Kariega Estuary, Kariega Salinity 19 between 2.34m and 0.00m below sea level from 2021-02-05T10:53:39+02:00 to 2026-01-13T10:56:21+02:00 at -33.616510,26.650560 (+N-S,-W+E)