cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25403/upresearchdata.24276937.v1
title: Adsorption of aqueous Pb(II) using different metabolically inhibited bacterial cultures from industry

description: Sterilized reactors containing 100 ml of ultrapure water, 1 ml of 1.711 M 𝑁𝑎𝑁𝑂3 salt substitute with metabolically inhibited bacteria, and 100 ppm of Pb(II) were prepared. This will serve as the concentration for the basis of comparison with other microbial strains of the consortium. The reactor was triplicated to ensure repeatability and the Pb(II) removal over a 14 h period was investigated. Reactors were sampled at various time intervals and filtered (0.45 µm) and initial and final pH readings of the samples were measured. The Pb(II) concentration in samples was measured using atomic absorption spectroscopy (Perkin Elmer AAnalyst 400, Waltham, Massachusetts). The sampled adsorptions were fit to a pseudo-first order, two-phase pseudo-first order, pseudo-second order isotherms, and Crank's diffusion model. Batch adsorption experiments were carried out to predict the equilibrium behaviour of the adsorbents. Serum bottles containing 1.352 g/L of adsorbate were prepared with 100 mL of Pb(II) solution in concentrations ranging from 0 - 600 mg/L Pb, and sealed with rubber stoppers. The serum bottles were agitated using a water-bath shaker (Labotec EcoBatch Model 207) at a constant agitation speed of 120 rpm maintained at temperatures of 25°C, 35°C, and 45°C. The pH, as well as lead concentrations, were measured well after equilibrium was reached (24-hrs) using atomic absorbance spectrophotometry (Perkin Elmer, Waltham, Massachusetts). Langmuir, two-surface Langmuir, and Freundlich, models was used in evaluating the relationship between the adsorbate concentration and the amount adsorbed in the aqueous phase at equilibrium. Fourier-transform infrared (FTIR) spectra of the cultures were measured after four successive processes. The first measurement was taken after 24 h growth period of the bacteria. The second measurement was taken after 24 h oven drying of the bacteria at 74 °C. The third measurement was taken after the bacteria was exposed to 100 ppm of 𝑃𝑏(𝑁𝑂<sub>3</sub> )<sub>2</sub>. The last measurement was taken 14 h after the addition of 100 ppm 𝑃𝑏(𝑁𝑂<sub>3</sub>)<sub>2</sub> to the cultures. An attenuated total reflection (ATR) attachment was used in recording spectra on a Perkin Elmer Spectrum 100 FTIR spectrometer. All FTIR spectra were recorded on a wavenumber from 4000 to 500cm<sup>-1</sup> and represent an average of 30 scans. An ultrahigh-resolution filed emission scanning electron microscope (HR FESEM Zeiss Ultra Plus 55, Carl Zeiss AG, Oberkochen, Germany) with an InLens detector was used in studying the particle morphologies of the adsorbents. The scanning electron microscope was also fitted with an energy dispersive Xray spectrophotometer (EDS) which was used in analyzing the elemental composition of the metabolically inhibited adsorbents. <br>
DOI: 10.6084/m9.figshare.14185739.v4
title: Global GPP, ET, Ec, Es and Ei simulated by PML-V2 with AVHRR GIMMS3g LAI at a 0.05 degree resolution over 1982-2014

description: We provide global monthly and annual gross primary production(GPP), evapotranspiration (ET), canopy transpiration (Ec), soil evapiration (Es), rainfall interception loss (Ei) at a 0.05x0.05 degree resolution as simulated by PML-V2 forced with GLDAS V2.0 climate forcings, historical monthly CO2, AVHRR GIMMS3g LAI, GLASS V4 albedo and emissivity, MODIS IGBP land-use cover data etc.
DOI: 10.6084/m9.figshare.24923532.v3
title: No.2 National-scale 10-m maps of cropland use intensity in China during 2018-2023

description: There were three groups of national-scale datasets on cropland use intensity over conterminous China during the study period (2018-2023). The first group of datasets was the cropland use intensity dataset for each year. Five 10-m national scale cropland use intensity maps (ChinaCUI10m) were provided for China during 2018-2023. The second group of datasets was the newly derived 10-m cropland dataset (ChinaCropland10m) based on historical cropping activities. The historical cropland use intensity during 2018-2023 was summarized and the ChinaCropland10m was produced through discarding pixels with values of zero (cropland should be actively cropped for at least once during the past five years). The third group of datasets was the degree of intensification revealed by averaged cropland use intensity (ChinaMeanCI10m) based on historical CUI datasets in China during 2018-2023. The datasets are available at the Figshare repository in a Geotiff format. The dataset is provided in ESPG: 4326 (WGS_1984) spatial reference system.
DOI: 10.6084/m9.figshare.29003462.v1
title: Supporting data for gene expression analysis (qRT-PCR data in Figure 5)

description: Supporting data for gene expression analysis (qRT-PCR data in Figure 5)
DOI: 10.6084/m9.figshare.8247527.v1
title: Data and Code for "Limits on amplifiers of natural selection under death-Birth updating"

description: Data and Code for "Limits on amplifiers of natural selection under death-Birth updating": Python script used to compute the data and Mathematica notebooks used to produce the plots.
DOI: 10.17632/mdzpw4dr4t
title: BEC2HPC: A HPC spectral solver for nonlinear Schrödinger and rotating Gross-Pitaevskii equations. Stationary states computation

description: We present BEC2HPC which is a parallel HPC spectral solver for computing the ground states of the nonlinear Schrödinger equation and the Gross-Pitaevskii equation (GPE) modeling rotating Bose-Einstein condensates (BEC). Considering a standard pseudo-spectral discretization based on Fast Fourier Transforms (FFTs), the method consists in finding the numerical solution of the energy functional minimization problem under normalization constraint by using a preconditioned nonlinear conjugate gradient method. We present some numerical simulations and scalability results for the 2D and 3D problems to obtain the stationary states of BEC with fast rotation and large nonlinearities. The code takes advantage of existing HPC libraries and can itself be leveraged to implement other numerical methods like e.g. for the dynamics of BECs.
DOI: 10.6084/m9.figshare.21502014.v1
title: Henosepilachna vigintioctomaculata genome assembly and gene annotation

description: <em>Henosepilachna vigintioctomaculata</em> genome assembly (fasta file) and gene annotation (gff3 file)
DOI: 10.6084/m9.figshare.7931453.v1
title: File S5: Module functional annotation

description: Functional and pathway annotation for modules from the DREAM Disease Module Identification Challenge. Website: https://synapse.org/modulechallenge. Preprint: Choobdar, S., Ahsen, M.E., Crawford, J., et al. (2018). Open Community Challenge Reveals Molecular Network Modules with Key Roles in Diseases. bioRxiv 265553. https://www.biorxiv.org/content/early/2018/02/15/265553
DOI: 10.17632/3j93ybf4md
title: Regional heterogeneity in gene expression, regulation and coherence in hippocampus and prefrontal cortex across development and in schizophrenia. Collado-Torres et al, Neuron, 2019.

description: This dataset contains the Supplementary Figures and Tables for the "Regional heterogeneity in gene expression, regulation and coherence in hippocampus and prefrontal cortex across development and in schizophrenia" article by Collado-Torres et al, Neuron, 2019. Please cite the original article as well as the data itself if appropriate. For clarifications about the figures or data, please contact us by creating an issue at https://github.com/LieberInstitute/brainseq_phase2/issues. Thank you!
DOI: 10.17632/pwnbpvd44p
title: Modelling health outcomes of a decade of HIV, malaria and tuberculosis initiatives, Malawi. Appendix

description: Supplementary information to support the manuscript Modelling health outcomes of a decade of HIV, malaria and tuberculosis initiatives, Malawi by Mangal et al, 2025.
DOI: 10.17632/x94gx5vwhw
title: Information Technology and Lender Competition

description: Source data files of the article "Information Technology and Lender Competition". This package of MATLAB codes is used to generate numerical illustrations. Within the package, we provide a Word file, "Read me first.docx", to tell how to use the codes. Within each MATLAB file, there are also explanatory notes.
DOI: 10.6084/m9.figshare.13100225.v1
title: Neural Networks

description: These are the neural networks trained for this study.
DOI: 10.6084/m9.figshare.29114678.v1
title: SEA302_81rDNA_variant_calls

description: Variant call file from short read sequencing for near isogenic C. elegans line with ~81 rDNA copies and large region of linked wild isolate DNA (SEA302)
DOI: 10.17632/7djsbz6prv
title: The relation between physical and mental load, and the course of physiological functions and cognitive performance

description: The data relate to a manuscript that will be published inTheoretical Issues in Ergonomics Science. Taylor & Francis. Description of variables and research design: ID=the numerical identification of examined person (EP) age=19-27 pad_chair: pad=2; chair=1 gender: man=2; female=1 BoCmin=correctly cancelled symbols of Bo test/min or BoC1min...BoC20min BoCSUMmin=sum of correctly cancelled symbols of Bo test from all 20 minutes BoCMEANmin=mean of correctly cancelled symbols of Bo test from all 20 minutes BoEmin=incorrectly cancelled symbols (errors) of Bo test/min or BoE1min...BoE20min BoESUMmin=sum of incorrectly cancelled symbols (errors) of Bo test from all 20 minutes BoEMEANmin=mean of incorrectly cancelled symbols (errors) of Bo test from all 20 minutes VTA=absolute tidal volume change. VTA was subsequently calculated and expressed in liters. 0.5 l is the initial mean value. VTR=relative tidal volume change MV=minute ventilation TEMP=body temperature SCL=skin conductance level HRVSampEn=Heart rate variability sample entropy Pulse_frequency=heart rate (HR) Resp_frequency=respiratory rate (RR) HFLF_welch=low frequency to high frequency ratio, computed by Welch phase_exp=1-4 1: The control phase of the measurement lasted 2 minutes. In this phase, all EPs sat on chairs with no pads. Its purpose was to analyze the initial values of the EPs’ physiological functions. These values were supposed to be identical or very similar in the experimental group and the control group. Minutes 0,1. 2: The following rest phase of the measurement lasted 20 minutes. Control-group EPs continued sitting on chairs without pads, while EPs in the other group were seated on pads that had been added to their chairs. They would then sit on these pads until the end of the fourth phase, the final step in the experiment. During the second phase, EPs were not to show any deliberate cognitive activity. Activities involving inadvertent attention, however, were allowed, for example, looking forward at the table or out of the window. Minutes 2...21. 3: The load phase lasted 20 minutes, during which the EPs continuously filled out of the Bo test (Bourdon test T-78: the test of sustained, selected attention). Minutes 22...41. 4: The verification phase lasted 2 minutes. Following the end of the cognitive load, this phase also served to compare the development of physiological functions in the two groups of EPs in connection with the use of the pad, particularly with respect to exploring the rate of EPs’ adaptation after performance (load). Minutes 42,43.
DOI: 10.6084/m9.figshare.21376284.v1
title: Additional file 3 of Endoplasmic reticulum-quality control pathway and endoplasmic reticulum-associated degradation mechanism regulate the N-glycoproteins and N-glycan structures in the diatom Phaeodactylum tricornutum

description: Additional file 3: Table S2. The up- and down-regulated N-glycopeptides.
DOI: 10.6084/m9.figshare.28821560.v1
title: CRISPR Knockout Screen In CD4+ T cells

description: Frequency of LAG3⁻ CD4⁺ T cells across different gene knockouts. Viability and CD4+|CD4- percentages across different conditions. Perturbations include experimental targets and controls (NTC, OCC).
DOI: 10.6084/m9.figshare.5117167.v2
title: dft-vdw-range Data

description: Processed data
DOI: 10.6084/m9.figshare.12161910.v4
title: Dataset.xlsx

description: This data-set consists raw data for a study on knowledge, attitude and practices of healthcare workers in Makerere University Teaching Hospitals towards Coronavirus Disease (COVID-19).
DOI: 10.6084/m9.figshare.6199940.v1
title: Survey data from Individuals fail to reap the collective benefits of diversity because of over-reliance on personal information

description: The reported beliefs about the cues
DOI: 10.17632/hvg8wd6jdp
title: Data set of COVID-19 in Malaysia

description: This data set contains data on Malaysians’ health status, internet and social media usage, mental health and protective behaviors during the COVID-19 Pandemic.
DOI: 10.25375/uct.14839575.v1
title: Successful predatory avoidance behaviour to lion auditory cues during soft-release from captivity in cheetah

description: Due to global biodiversity declines, conservation programs have increasingly had to consider the value of reintroducing captive animals into the wild. However, reintroductions often fail as captive individuals may be naïve to predators and do not recognize or respond timeously to predatory cues, contributing to high mortality rates soon after release. This study evaluates differences in predator response behaviours between individuals from captive, semi-wild (i.e., raised in captivity and successfully released) and wild populations of cheetah (<i>Acinonyx jubatus</i>) to an artificially simulated auditory threat of lions (<i>Panthera leo</i>), a larger, natural predator in South Africa. Such comparisons improve our understanding of differences between captive and wild behaviours and provide an aspect to evaluating the relative success of soft-release programs. Changes in the proximal distance, the latency of approach and hesitation toward both control (African bush cricket) and treatment (lion) auditory cues were observed for 29 cheetah from captive, semi-wild and wild populations in at least three trail replicates. Overall, captive individuals consistently displayed poor predatory response behaviours, approaching the treatment as often as the control, spending time near the stimulus (&lt;10m) and often hesitating. Whereas both semi-wild and wild individuals could distinguish between the control and treatment, consistently fleeing from the latter, with little hesitation. Repeatability analyses indicated that these behavioural responses to predatory cues could not be explained by individual personality and between-trial learning comparisons showed no evidence of habituation. Our findings demonstrate how <i>a priori</i> testing for predator naïvety could inform future introductory decisions and thereby increase post-release survival rates, significantly improving the efficacy of reintroduction strategies. We, therefore, emphasize the importance of such research and screening in highly threatened species, such as cheetah, where reintroduction from captivity has become a necessary consideration.
DOI: 10.6084/m9.figshare.23593617.v1
title: Livestock grazing strengthens the effect of vole activity on soil microbial community

description: A 9-year manipulative experiment to investigate the effects of Brandt's vole (<em>Lasiopodomys brandtii</em>) on soil microbial communities under varying levels of livestock grazing intensity in temperate steppe ecosystems.
DOI: 10.6084/m9.figshare.8052221.v1
title: PBMC training data

description: This is the PBMC training dataset used for training Scaden models to perform deconvolution on PBMC RNA-seq datasets. It is compiled from four different PBMC scRNA-seq datasets downloaded from the 10X Genomics website (donorA, donorC, data6k, data8k).The datasets downloaded from 10X Genomics were processed and used to generate artificial bulk RNA-seq samples, which result in this dataset. A link to the 10X Genomics datasets site is provided.<br>
DOI: 10.17632/c65dvvc9xd
title: Data for: Highly transparent and color-adjustable Eu2+ doped SrO-SiO2-Al2O3 multilayered glass ceramic prepared by controlling crystallization from glass
DOI: 10.17632/rnyrpzyw3h
title: Bias-Free Dataset of Food Delivery App Reviews with Data Poisoning Attacks

description: This dataset consists of reviews collected from restaurants on a Korean delivery app platform running a review event. A total of 128,668 reviews were collected from 136 restaurants by crawling reviews using the Selenium library in Python. The dataset named as Korean Reviews.csv provides review data not translated to English, and the dataset named as English Reviews.csv provides review data translated to English. The 136 chosen restaurants run review events which demand customers to write reviews with 5 stars and photos. So the annotation of data was done by considering 1) whether the review gives five-star ratings, and 2) whether the review contains photo(s).
DOI: 10.6084/m9.figshare.20465637.v1
title: DCE_MRI_MRU.dat

description: Estimating glomerular filtration rate (GFR) is crucial for diagnostic purposes. DCE-MRI is capable of measuring tracer kinetic parameters of kidney function. This is a DCE-MRI data for renal imaging acquired by radialVIBE with a multi-channel body-matrix coil on a 3T Siemens Skyra MRI scanner. 5304 radial spokes were acquired with a total scan time of 8.3 mins. Imaging resolution was 1.25x1.25x3.00 mm<sup>3</sup> and number of slices was 32.
DOI: 10.6084/m9.figshare.23646729.v2
title: Missouri Shapefiles

description: Shapefiles for Missouri including the shape of the state of Missouri, a shapefile of all major waterbodies, a shapefile of major roads (i.e. primary and secondary roads), and a shapefile of all roads (down to tertiary roads). There is also a shapefle of public lands and one of non-huntable lands, details of which are in <em>Boudreau et al. Bear Harvest Vulnerability Journal of Wildlife Management. </em>
DOI: 10.6084/m9.figshare.28519943.v1
title: R code for: Quantifying the Degradation Cost of Frequent Fast Charging Across Multiple Electric Vehicle Battery Chemistries

description: Abstract (Article) We investigate the relative impact of fast charging on degradation in commercial lithium-ion battery cells with electric vehicle-relevant chemistries (NMC, NCA and LFP) by cycling them under five different repeating patterns that mix fast and slow charging events for up to 16 months with passive thermal management. We then estimate pack replacement cost to reach 150,000 lifetime vehicle miles traveled. We find that more fast-charging results in more degradation, but the magnitude of this effect varies considerably across the tested chemistries. For the most extreme scenario (&gt;90% fast charging, full voltage range), we find average pack replacement costs span from $0 for LFP (no replacements) to $32,000 for NMC (3 replacements) and $210,000 for NCA (20 replacements). Restricting fast charging voltage to cycle ~20% to 80% of nameplate capacity reduces lifetime pack replacement costs to $0 for NMC and $60,000 for NCA (6 replacements). These degradation patterns suggest that when operating to limit capacity fade from fast charging there are cases where the practical energy density of LFP packs can exceed that of NMC and NCA packs.
DOI: 10.6084/m9.figshare.29120486.v1
title: Dataset Research of Using Travel Application.xlsx

description: This is the dataset that I use from the survey results related to user satisfaction with several online travel applications in Indonesia. I use this data for analysis purposes in my research.
DOI: 10.17632/tm47d7z5xf
title: Chicago Taxi Trips (Tipping)

description: This dataset accompanies a paper examining how tipping practices changed during the pandemic. I download data on unique taxi rides taken in Chicago freely available from the Chicago data portal for Jan 2018-March 2021. The data include a number of variables for each taxi trip, including the fare amount, the tip amount, and the passenger's location.  I merge in demographic data available from CMAP for the community area the passenger came from in Chicago as well as daily data on COVID-19 hospitalizations to enrich the analysis.  I filter the dataset to taxi rides payed with credit card, and remove trips with exceptionally weird data (e.g. 0 second trip duration, fares greater than $1000). I use the dataset to estimate the effect of the pandemic on whether passengers tip and if so, the average percent tipped. I find that the likelihood that a passenger leaves a tip declines by roughly 5 percentage points during the pandemic but the average non-zero tip left increased by roughly 2 percentage points higher.  I exploit geographic and temporal heterogeneity in the data to explore the possible mechanisms behind these patterns in tipping.
DOI: 10.6084/m9.figshare.26148799.v1
title: Data for "Nitrogen deposition differentially regulates the sensitivity of gross primary productivity to extreme drought versus wetness"

description: Experimental data used for analysis in the manuscript titled "Nitrogen deposition differentially regulates the sensitivity of gross primary productivity to extreme drought versus wetness".
DOI: 10.6084/m9.figshare.19089896.v1
title: Starfleet Headache Treatment - Example Data for Repeated ANOVA

description: Fictitious data to look at the overall health of Starfleet volunteers on four different drugs. Since each volunteer is measured on each of the four drugs, we propose to use this datasets to look at repeater measures ANOVA to determine if the mean health scores differs between drugs.
DOI: 10.6084/m9.figshare.26343724.v1
title: BLAST JSON output for large rubisco mRNA for 14-wpi CY2-infected N. benthamiana leaf

description: BLAST JSON output for large rubisco mRNA for 14-wpi CY2-infected N. benthamiana leaf
DOI: 10.6084/m9.figshare.28229576.v1
title: TMP employee salaries csv

description: original url<br>https:\/\/data.montgomerycountymd.gov\/api\/views\/xj3h-s2i7\/rows.csv?accessType=DOWNLOAD
DOI: 10.6084/m9.figshare.5125642.v1
title: Supplementary Material for: The Sitting Height/Height Ratio for Age in Healthy and Short Individuals and Its Potential Role in Selecting Short Children for <b><i>SHOX</i></b> Analysis

description: <b><i>Aims:</i></b> To determine the presence of abnormal body proportion, assessed by sitting height/height ratio for age and sex (SH/H SDS) in healthy and short individuals, and to estimate its role in selecting short children for <i>SHOX</i> analysis. <b><i>Methods:</i></b> Height, sitting height and weight were evaluated in 1,771 healthy children, 128 children with idiopathic short stature (ISS), 58 individuals with <i>SHOX</i> defects (SHOX-D) and 193 females with Turner syndrome (TS). <b><i>Results:</i></b> The frequency of abnormal body proportion, defined as SH/H SDS &gt;2, in ISS children was 16.4% (95% CI 10-22%), which was higher than in controls (1.4%, 95% CI 0.8-1.9%, p &lt; 0.001). The <i>SHOX</i> gene was evaluated in all disproportionate ISS children and defects in this gene were observed in 19%. Among patients with SHOX-D, 88% of children (95% CI 75-100%) and 96% of adults had body disproportion. In contrast, SH/H SDS &gt;2 were less common in children (48%, 95% CI 37-59%) and in adults (28%, 95% CI 20-36%) with TS. <b><i>Conclusion:</i></b> Abnormal body proportions were observed in almost all individuals with SHOX-D, 50% of females with TS and 16% of children considered ISS. Defects in <i>SHOX</i> gene were identified in 19% of ISS children with SH/H SDS &gt;2, suggesting that SH/H SDS is a useful tool to select children for undergoing <i>SHOX</i> molecular studies.
DOI: 10.17632/36m6fjsm4s
title: Tafsir Tematik Dakwah

description: Referensi Tafsir Tematik Dakwah
DOI: 10.17632/995k3sdv82
title: Supplementary file: Dermatological and nephrological complications after polymethyl methacrylate (PMMA) injections: a series of 239 cases.

description: Detailed questionnaire methodology and data collection process.
DOI: 10.17632/zwn8w8x42c
title: PFKFB3 attenuates cisplatin-induced ferroptosis in gastric cancer via dephosphorylation of SLC7A11/xCT

description: the original, unprocessed data of PFKFB3 attenuates cisplatin-induced ferroptosis in gastric cancer via dephosphorylation of SLC7A11/xCT