cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5129614.v1
title: Supplementary Material for: Captive Conditions of Pet Lemurs in Madagascar

description: Live extraction of wildlife is a threat to biodiversity and can compromise animal welfare standards. Studies of the captive environments and welfare of pet primates are known, but none has focused on Madagascar. We aimed to expand knowledge about the captive conditions of pet lemurs in Madagascar. We hypothesized that captive lemurs would often be kept in restrictive settings, including small cages, would be fed foods inconsistent with their natural diets and, as a result, would be in bad physical or psychological health. Data were collected via a web-based survey (n = 253 reports) and from the websites and social media pages of 25 hotels. Most lemurs seen by respondents were either kept on a rope/leash/chain or in a cage (67%), though some lemurs were habituated and were not restrained (28%). Most of the time (72%) cages were considered small, and lemurs were rarely kept in captivity together with other lemurs (81% of lemurs were caged alone). Pet lemurs were often fed foods inconsistent with their natural diets, and most (53%) were described as being in bad health. These findings point to a need to undertake outreach to pet lemur owners in Madagascar about the captivity requirements of primates.
DOI: 10.6084/m9.figshare.8046290.v1
title: Proteome database of Escherichia coli K-12

description: Ensemble of proteins in a bacterial species hold relevance for understanding the biochemical and metabolic activities of a cell at a global level. To this end, proteomics technologies have opened a window into the inner workings of cells, allowing rational design changes to be implemented at the cellular level for overproduction of specified metabolite through heterologous expression of particular genes or pathways. Such omics technologies generally generate large amount of information that requires bioinformatic approaches for inferring biological meaning. For example, useful information such as protein name and amino acid sequence information needs to be extracted from proteome data file automatically through bioinformatic tools. Hence, this work uses an in-house MATLAB function to construct a proteome database of <i>Escherichia coli </i>K-12. Information encapsulated in the proteome database include protein name, amino acid sequence, number of residues in protein, molecular weight of protein and nucleotide sequence of protein. In particular, protein name and amino acid sequence information are extracted from the original fasta proteome file, while number of amino acid residues, molecular weight and nucleotide sequence of each protein in the proteome are calculated using built-in functions in MATLAB. Collectively, the proteome database of <i>E. coli </i>K-12 should find use in diverse biology and biotechnology applications ranging from understanding the molecular weight of individual proteins to synthesizing a gene in molecular cloning workflow. <br>
DOI: 10.6084/m9.figshare.9735476.v1
title: 100 instances

description: A small dataset of videos to perform instance level recognition<br>
DOI: 10.17632/czf5khpyhh
title: GWAS Summary Data of: Identification of genomic loci associated with resting heart rate and shared genetic predictors with all-cause mortality

description: Data related to this article: Nat Genet. 2016 Dec;48(12):1557-1563. doi: 10.1038/ng.3708. Epub 2016 Oct 31. Identification of genomic loci associated with resting heart rate and shared genetic predictors with all-cause mortality. Eppinga RN1, Hagemeijer Y1, Burgess S2, Hinds DA3, Stefansson K4,5, Gudbjartsson DF4,6, van Veldhuisen DJ1, Munroe PB7,8, Verweij N1, van der Harst P1,9,10. Author information Abstract Resting heart rate is a heritable trait correlated with life span. Little is known about the genetic contribution to resting heart rate and its relationship with mortality. We performed a genome-wide association discovery and replication analysis starting with 19.9 million genetic variants and studying up to 265,046 individuals to identify 64 loci associated with resting heart rate (P &lt; 5 × 10-8); 46 of these were novel. We then used the genetic variants identified to study the association between resting heart rate and all-cause mortality. We observed that a genetically predicted resting heart rate increase of 5 beats per minute was associated with a 20% increase in mortality risk (hazard ratio 1.20, 95% confidence interval 1.11-1.28, P = 8.20 × 10-7) translating to a reduction in life expectancy of 2.9 years for males and 2.6 years for females. Our findings provide evidence for shared genetic predictors of resting heart rate and all-cause mortality. PMID: 27798624 DOI: 10.1038/ng.3708 [Indexed for MEDLINE]
DOI: 10.17632/khy77hf3yt
title: Compassion Fatigue and the Emergency Department

description: The purpose of this quality improvement project was to identify and reduce the level of CF in ED nurses by implementing Real Time Transformative Response© (RTR). RTR© is a technique that uses combinations of neurofeedback response awareness, biofield therapy intervention, and clearing of unwanted energy. A sample of ED nurses working 24-hours or more weekly at a moderately-sized, suburban, Midwestern hospital ED completed a Professional Quality of Life Scale (ProQOL 5; version 5) before and after three-months of RTR© training. Results 34 ED nurses (N=34) completed RTR© training and ProQOL 5 surveys. The overall mean score for the pre-RTR© training survey was 107 (sd =1.1385), and the post-RTR© training survey was 106.613 (sd =1.1677) (t =1.6924, df =66, p =0.0476). Mean scores pre-and post-RTR© training: compassion satisfaction was 3.59 (sd = 0.9521) increased to 3.95 (sd = 0.7766) (t = 1.997, df = 66, p = 0.000), burnout was 2.71 (sd = 1.1501) decreased to 2.36 (sd = 0.9120) (t = 1.997, df = 66, p = 0.000), and secondary traumatic stress was 2.45 (sd = 1.0002) decreased to 2.25 (sd = 0.9143) (t = 1.997, df = 66, p = 0.0017). The study appeared to have successfully achieved the aim of this study by decreasing the overall CF by 10.17% in three months. The data detailed has the potential to be reused to support the development of alternative techniques to reduce compassion fatigue of bedside clinicians.
DOI: 10.17632/wd6mnv2yx4
title: Table of Pollution of Groundwater taken from Wells of Lae City.

description: The data contains the result of water quality tests on parameters BOD, hardness (CaCO3), Turbidity, Calcium and Magnesium from well sites of: Erap, Boystown (Erap), 40 Mile, Balob T/C, Ampo, Martin Luther Seminary and compared with the WHO standards.
DOI: 10.6084/m9.figshare.12383573.v1
title: Data for article -- Similarity coefficient-based cell formation method considering operation sequence with repeated operations

description: 7 problems from previous literature are employed to test the performance of the proposed approach and show its advantages by comparing the results with existing approaches. The problems are arranged from small to large scale. Their incidence matrices, data sets and solutions can be found at the dataset.
DOI: 10.6084/m9.figshare.24297298.v1
title: Supplementary Material for: Causes and risk factors for absenteeism among medical staff in German specialized lung clinics during the COVID pandemic

description: Background: Staff shortages pose a major challenge to the health system. Objectives: To clarify the role of different causative factors we investigated staff absenteeism during the COVID pandemic. Methods: The prospective multicentre cohort study assessed the private and professional impact of the pandemic on health care workers (HCW) using a specially developed questionnaire. HCWs from 7 specialist lung clinics throughout Germany were surveyed from the 1st to the 23rd of December 2021. The current analysis addresses pandemic-related absenteeism. Results: 1134 HCW (55%, female18.4% male, 26.3% not willing to provide information on age or gender) participated. 72.8% had received at least one vaccination dose at the time of the survey, and 9.4% reported a COVID infection. Of those with positive tests, 98% reported home quarantine for median (IQR) 14 (12-17) days; 10.3% of those who ultimately tested negative also reported quarantine periods of 14 (7-14) days. 32.2% of vaccinated respondents reported absenteeism due to vaccine reactions of 2 (1-3) days. Overall, 37% (n=420) of HCW reported pandemic-related absenteeism, with 3524 total days of absenteeism, of which 2828 were due to illness/quarantine and 696 to vaccination effects. Independent risk factors for COVID-related absenteeism ≥5 days included already having COVID, but also concern about long-term effects of COVID (OR 1,782, p=0.014); risk factors for vaccine-related absenteeism ≥2 days included concerns late effects of vaccination (OR 2.2, 95%CI 1.4-3.1, p&lt;0.000). Conclusion: Staff shortages due to quarantine or infections and vaccine reactogenicity have put a strain on German respiratory specialists. The fact that staff concerns also contributed to absenteeism may be helpful in managing future pandemic events to minimize staff absenteeism.
DOI: 10.6084/m9.figshare.25803085.v2
title: Data for <i>Establishing the origin of Marcus-inverted-region behavior in the excited-state dynamics of Cobalt(III) polypyridyl complexes</i>

description: Data of main and supplementary figures for the manuscript "Establishing the origin of Marcus-inverted-region behavior in the excited-state dynamics of Cobalt(III) polypyridyl complexes"
DOI: 10.6084/m9.figshare.22147103.v1
title: Spatial transcriptomic (Visium) of treatment-naive and residual disease HGSOC patient

description: Seurat objects of 10 Visium sections (4 before and 6 after treatment) seurat &lt;- readRDS("P18.rds")An object of class Seurat with 1 assay :Spatial
DOI: 10.6084/m9.figshare.25229465.v1
title: Vul_global_2023.zip

description: grado de vulnerabilidad global por distrito
DOI: 10.17632/7rfdm4bg9g
title: Drought indices for the Czech Republic (1876–2018)

description: Drought indices were calculated for 8 long-term stations located in the Czech Republic, their elevations ranging roughly from 200 to 450 m a.s.l. The sites represent weather stations with the longest daily precipitation and temperature records available within the Czech Hydrometeorological Institute database. The study applies four drought indices. Palmer Drought Severity Index (PDSI; Palmer, 1965) was one of the first historical attempts to identify droughts using more than just precipitation data. This index incorporates precipitation, temperature, and water-holding capacity of soils. Although it originally was developed to identify droughts affecting agriculture, PDSI is used today also for other applications. Palmer Z Index (PZIN) is a first step in estimating PDSI and it expresses anomaly in water balance over the calculation period. It therefore responds to short-term conditions better than does PDSI and enables identifying rapidly developing drought conditions. Another drought index applied is the Standardized Precipitation Evaporation Index (SPEI) that uses precipitation and temperature data only. Two versions of SPEI were calculated: SPEI-52, which characterizes rather long-term droughts, and SPEI-4, which is more suitable for analyzing short-term events. All drought indices were calculated using temperature and precipitation data only, because other drought-related meteorological variables (e.g., solar radiation, wind speed, and humidity) are not available in these historical records. The indices are available in weekly temporal resolution (52 values per year) from the start of the individual stations’ observation to 2018. The longest records are available for Prague-Klementinum and Tabor (1876–2018, 143 years) while the shortest series at Klatovy starts in 1922 (97 years).
DOI: 10.17632/yrbzms2dcg
title: Fatigue lives data

description: The fatigue lives data corresponding to Figures 8, 11, and 12 are provided in an excel file. The reader can find the data stored in three separate sheets within the excel file attached.
DOI: 10.6084/m9.figshare.12455828.v5
title: Biophysical model inputs - Dissertation

description: Niche Mapper biophysical model inputs for 13 species in 8 different environments.
DOI: 10.6084/m9.figshare.7158974.v1
title: Raw pre-processed dataset for model transfer

description: Raw pre-processed dataset for model transfer
DOI: 10.6084/m9.figshare.23607615.v1
title: patient30.rar

description: A Patient with fundus images that taken by Ret-cam.
DOI: 10.6084/m9.figshare.28931513.v1
title: datasets

description: This project explores the integration of <b>Geographic Information Systems (GIS)</b> and <b>Natural Language Processing (NLP)</b> to improve job–candidate matching in recruitment. Traditional AI-based e-recruitment systems often ignore geographic constraints. Our hybrid model addresses this gap by incorporating both textual similarity and spatial relevance in matching candidates to job postings.Data UsedCandidate Data (CVs)<b>Source</b>: Scraped from emploi.ma<b>Size</b>: 1000 CVs after cleaning<b>Content</b>: Candidate names (anonymized), skills, experiences, locations (coordinates), availability, etc.Job Descriptions<b>Source</b>: Publicly available dataset from Kaggle<b>Size</b>: we took 1000 job postings using category :Morocco<b>Content</b>: Titles, descriptions, required skills, sector labels, and office locations...All datasets have been cleaned and anonymized for privacy and research ethics compliance.
DOI: 10.17632/bfn6vs59j2
title: Impacto de la familia, de acuerdo con su estructura en el desempeño académico de alumnos del primer grado de secundaria.

description: trabajo de investigacion neuuni
DOI: 10.6084/m9.figshare.27795573.v1
title: OncoDrug+ data 2.0

description: Combinations of cancer drugs have the potential to overcome resistance, improve the response rate of existing drugs and reduce dose-limiting toxicity associated with single agents. Existing drug combination databases only provide response data, such as synergy scores between two drugs, without important contextual information to assist oncologists in matching their patients with these combinations in an evidence-based way. To address this gap, we constructed an unique dataset by manually collecting and integrating drug combinations and corresponding evidences from FDA databases, clinical guidelines, clinical trials, clinical case reports, patient-derived tumor xenograft models, cell line models and bioinformatics predictions.Records classified into Level A were derived from professional clinical guidelines or included in the FDA database.Records classified into Level B were collected from clinical trials and individual case reports in electronic medical records.Records classified into Level C were obtained from in vivo or in vitro experiments, including PDX mouse models, cell line models and high-throughput drug screening experiments.Records classified into Level D dataset were derived from drug combination predictions based on bioinformatic algorithms.Our manuscript about this dataset has been submitted.
DOI: 10.6084/m9.figshare.27930138.v1
title: FIB-SEM tomography data

description: -file structure by compact and particle names-includes SEM images showing locations of scans on TRISO particles-includes Dragonfly ORSSession files--containing the unprocessed, aligned, cropped and processed images, segmented phases (pores, fission products, buffer matrix), separated pores, and meshes. Dragonfly is free for research use: https://dragonfly.comet.tech/en/non-commercial-licensing. Meshes of any ROI (eg. all pores, pores within a specific size range, fission products, etc) can be easily exported. Analysis can also be done within the program and the training data and deep learning model used for segmentation can be accessed in the software.
DOI: 10.6084/m9.figshare.23542548.v1
title: data of Shi et al. 2023.xlsx

description: We sampled wild insect pollinators in 18 smallholder farmland to explore the impact of oilseed rape and Chinese milk vetch on wild pollinator communities across a semi-natural habitat gradient.
DOI: 10.6084/m9.figshare.24293563.v1
title: Processed SPR data

description: Processed SPR data used to generate Figure 5D in Metcalfe et al. MATLAB script included to generate the panels in Figure 5D.
DOI: 10.6084/m9.figshare.27959409.v1
title: <b><i>ABO </i></b><b>polymorphisms contributes to ischemic stroke in a Chinese Han population</b>

description: Five SNPs (rs8176749, rs8176745, rs8176740, rs8176720, and rs512770) within the exon region of <i>ABO</i> gene were selected and genotyped.
DOI: 10.17632/57fmn7rh4n
title: Dataset of night-time emissions of the Earth in the near UV range (290-430 nm), with 6.3 km resolution, in the latitude range -51.6 +51.6 degrees, acquired on board the International Space Station with the Mini-EUSO detector

description: The data presented here are related to the research paper entitled “Observation of night-time emissions of the Earth in the near UV range from the International Space Station with the Mini-EUSO detector” (Remote Sensing of Environment, Volume 284, January 2023, 113336, https://doi.org/10.1016/j.rse.2022.113336). 
The data have been acquired with the Mini-EUSO detector, an UV telescope operating in the range 290-430 nm and located inside the International Space Station. The detector was launched in August 2019, and it has started operations from the nadir-facing UV transparent window in the Russian Zvezda module in October 2019. The data presented here refer to 32 sessions acquired between 2019-11-19 and 2021-05-06. The instrument consists of a Fresnel-lens optical system and a focal surface composed of 36 Multi-Anode Photomultiplier tubes, each with 64 channels, for a total of 2304 channels with single photon counting sensitivity. The telescope, with a square field-of-view of 44°, has a spatial resolution on the Earth surface of 6.3 km and saves triggered transient phenomena with a sampling rate of 2.5 μs and 320 μs. The telescope also operated in continuous acquisition at a 40.96 ms scale. 
We present here large-area night-time UV maps obtained processing the 40.96 ms data, taking averages over regions of some specific geographical areas (e.g., Europe, North America). Data are binned into 0.1° × 0.1° or 0.05° × 0.05° cells (depending on the scale of the map) over the Earth’s surface. Data are made available in the form of tables (latitude, longitude, counts) and kmz files (containing the .png images).
DOI: 10.6084/m9.figshare.5576332.v2
title: Australias Ocean Microbiome Products

description: .fasta file containing Roche 454 Quality Controlled sequences generated from the Australias Ocean microbiome project. <br>.txt file containing sequence taxonomic assignments based on the SILVA reference database.<br><br>mapping file identifying sample origins and used for sourcetracking the impact of the East Australia Current on coastal marine microbial assemblages<br>Supplementary Table 1 from manuscript "Microbial tropicalisation driven by a strengthening western boundary current" - OTU table<br>Supplementary Table 4 from manuscript "Microbial tropicalisation driven by a strengthening western boundary current" - Functional gene abundances
DOI: 10.6084/m9.figshare.21028441.v2
title: Code.zip

description: " <strong>Metabolome-based genome-wide association study of meat leads to novel genetic and biochemical insights" analysis code</strong>
DOI: 10.17632/89kzh8xm6p
title: RESTAURACIÓN DE CUERPOS DE AGUA CON AFECTACIONES DE VERTIMIENTOS DE AGUAS RESIDUALES CON RIESGO EPIDEMIOLÓGICO EN , CÚCUTA 2024-2025 contaminados 2024

description: Las muestras fueron obtenidas entre septiembre y noviembre de 2024, mediante muestreo de tipo compuesto, y con búsqueda de características fisicoquímicas y microbiológicas del agua en la Quebrada La tonchalera, en dos puntos georeferenciados. El agua se ha convertido en un problema global, que no es posible abordarla sólo desde un enfoque, postura o
disciplina en particular, además, su responsabilidad ha trascendido a todos los espacios y sociedades, ya no es un
problema local. Es de completa necesidad y urgencia que la problemática del agua que hoy ha alcanzado niveles
exorbitantes sea abordada de forma inter y multidisciplinar, además que se convierta de interés de los gobiernos. El
agua ya no es sólo un problema ecológico o fisicoquímico e incluso de salud, hoy se ha convertido también en un
problema social, cultural, político y económico, partiendo del acceso tan inequitativo que se da en varias sociedades,
donde la mercantilización, escasez y lucha por el acceso al agua se ha convertido en un problema grave y de relevancia
social, porque las consecuencias de la privatización de las fuentes naturales de agua están afectando de diversas
formas a las comunidades, trastornando sus hábitos y convivencias, sin mencionar los graves problemas de salud y
ambiental.
DOI: 10.6084/m9.figshare.23685360.v2
title: The annotation files of two mahogany species

description: 1. Swietenia_macrophylla_10X.cds.zip, Swietenia_macrophylla_10X.cds.z01，Swietenia_macrophylla_10X.cds.z02，Khaya_senegalensis_10X.cds.zip，Khaya_senegalensis_10X.cds.z01，Khaya_senegalensis_10X.cds.z02，Swietenia_macrophylla_10X.gff.gz，Khaya_senegalensis_10X.gff.gz，Swietenia_macrophylla_10X.pep.gz，Khaya_senegalensis_10X.pep.gz were the annotation files of the 10X version geome assembly. 2. Swietenia_macrophylla_HiC.cds.zip，Swietenia_macrophylla_HiC.cds.z01，Swietenia_macrophylla_HiC.cds.z02，Khaya_senegalensis_HiC.cds.zip，Khaya_senegalensis_HiC.cds.z01，Khaya_senegalensis_HiC.cds.z02, Swietenia_macrophylla_HiC.gff.gz，Khaya_senegalensis_HiC.gff.gz，Swietenia_macrophylla_HiC.pep.gz，Khaya_senegalensis_HiC.pep.gz were the annotation files of the chromosomes version geome assembly. 3.Swietenia_macrophylla_10X.cds,Swietenia_macrophylla_HiC.cds,Khaya_senegalensis_HiC.cds and Khaya_senegalensis_10X.cds have been compressed into separate volumes due to the size of the files. 4.Swietenia_macrophylla.miRNA,Swietenia_macrophylla.rRNA.gff,Swietenia_macrophylla.snRNA.gff,Swietenia_macrophylla.tRNA.gff,Khaya_senegalensis.miRNA.gff,Khaya_senegalensis.rRNA.gff,Khaya_senegalensis.snRNA.gff,Khaya_senegalensis.tRNA.gff were the annotation files of ncRNA. 5.Swietenia_macrophylla_pseudogene.xlsx and Khaya_senegalensis_pseudogene.xlsx were the files of pseudogenes.
DOI: 10.6084/m9.figshare.26270665.v1
title: HPL Kidney 10x

description: HPL model weights for Kidney trained on UPenn 10x magnification
DOI: 10.6084/m9.figshare.28921340.v1
title: A scalable method for characterizing patchy and ephemeral insect defoliation from shorttime-series of Sentinal-2 data.

description: Data for used for figure creation in our currently submitted paper. Full 10m resolution maps of New York state used in this study will be made upon request.
DOI: 10.17632/rkf4js5xdd
title: U-Pb dating of Triassic units from the Domeyko Range, northern Chile (II)

description: This dataset covers the U-Pb dating of detrital and igneous samples from Triassic volcanic and sedimentary units across the Domeyko Range, northern Chile. It accompanies planned publication "Gondwanan inheritance on the building of the western Central Andes (Domeyko Range, Chile): Structural and thermochronological approach (U-Pb and 40Ar-39Ar)". The geochronology provides time constraints for the age of sources and maximum depositional ages of Triassic units (Quebrada del Salitre, Sierra de Varas, and La Ternera formations) as well as crystallization ages of some of these Triassic units and one age of the Paleozoic basement (Sierra Castillo batholith). Files comprise samples analyzed in the Laboratorio de Estudios Isotópicos (U-Pb_LEI) and Arizona LaserChron (U-Pb_ALC) laboratories. Each sample includes information about the zircons considered and discarded in the calculation of dates.
DOI: 10.6084/m9.figshare.7098680.v1
title: Atlas, SGDP

description: Allele age estimated using GEVA on data from the Simons Genome Diversity Project (SGDP), for all autosomes.