cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.vp825
title: Data from: Lateralization in alpha-band oscillations predicts the locus and spatial distribution of attention

description: Attending to a task-relevant location changes how neural activity
 oscillates in the alpha band (8–13Hz) in posterior visual cortical areas.
 However, a clear understanding of the relationships between top-down
 attention, changes in alpha oscillations in visual cortex, and attention
 performance are still poorly understood. Here, we tested the degree to
 which the posterior alpha power tracked the locus of attention, the
 distribution of attention, and how well the topography of alpha could
 predict the locus of attention. We recorded magnetoencephalographic (MEG)
 data while subjects performed an attention demanding visual discrimination
 task that dissociated the direction of attention from the direction of a
 saccade to indicate choice. On some trials, an endogenous cue predicted
 the target’s location, while on others it contained no spatial
 information. When the target’s location was cued, alpha power decreased in
 sensors over occipital cortex contralateral to the attended visual field.
 When the cue did not predict the target’s location, alpha power again
 decreased in sensors over occipital cortex, but bilaterally, and increased
 in sensors over frontal cortex. Thus, the distribution and the topography
 of alpha reliably indicated the locus of covert attention. Together, these
 results suggest that alpha synchronization reflects changes in the
 excitability of populations of neurons whose receptive fields match the
 locus of attention. This is consistent with the hypothesis that alpha
 oscillations reflect the neural mechanisms by which top-down control of
 attention biases information processing and modulate the activity of
 neurons in visual cortex.
description: IkkaiDataUpload
DOI: 10.5061/dryad.nk780
title: Data from: The Centennial Trends Greater Horn of Africa precipitation dataset

description: East Africa is a drought prone, food and water insecure region with a
 highly variable climate. This complexity makes rainfall estimation
 challenging, and this challenge is compounded by low rain gauge densities
 and inhomogeneous monitoring networks. The dearth of observations is
 particularly problematic over the past decade, since the number of records
 in globally accessible archives has fallen precipitously. This lack of
 data coincides with an increasing scientific and humanitarian need to
 place recent seasonal and multi-annual East African precipitation extremes
 in a deep historic context. To serve this need, scientists from the UC
 Santa Barbara Climate Hazards Group and Florida State University have
 pooled their station archives and expertise to produce a high quality
 gridded ‘Centennial Trends’ precipitation dataset. Additional observations
 have been acquired from the national meteorological agencies and augmented
 with data provided by other universities. Extensive quality control of the
 data was carried out and seasonal anomalies interpolated using kriging.
 This paper documents the CenTrends methodology and data.
description: CenTrends_v1Seasonal and monthly CenTrends precipitation and standard errors
DOI: 10.5061/dryad.2306t
title: Data from: Shear-induced orientational dynamics and spatial heterogeneity in suspensions of motile phytoplankton

description: Fluid flow, ubiquitous in natural and man-made environments, has the
 potential to profoundly impact the transport of microorganisms, including
 phytoplankton in aquatic habitats and bioreactors. Yet, the effect of
 ambient flow on the swimming behavior of phytoplankton has remained poorly
 understood, largely due to the difficulty of observing cell-flow
 interactions at the microscale. Here, we present microfluidic experiments
 where we tracked individual cells for four species of motile phytoplankton
 exposed to a spatially non-uniform fluid shear rate, characteristic of
 many flows in natural and artificial environments. We observed that medium
 to high mean shear rates (1 – 25 s^-1) produce heterogeneous cell
 concentrations in the form of regions of accumulation and regions of
 depletion. The location of these regions relative to the flow depends on
 the cells’ propulsion mechanism, body shape, and flagellar arrangement, as
 captured by an effective aspect ratio. Species having a large effective
 aspect ratio accumulated in the high-shear regions, due to shear-induced
 alignment of the swimming orientation with the fluid streamlines. Species
 having an effective aspect ratio close to unity exhibited little
 preferential accumulation at low to moderate flow rates, but strongly
 accumulated in the low-shear regions under high flow conditions,
 potentially due to an active, behavioral response of cells to shear. These
 observations demonstrate that ambient fluid flow can strongly affect the
 motility and spatial distribution of phytoplankton and highlight the rich
 dynamics emerging from the interaction between motility, morphology, and
 flow.
description: Cell trajectories in no
 flowA
 Matlab structure for each organism contains measured cell trajectories in
 a no flow condition. These data were used in the production of Figure
 1.trajectoriesNoFlow.zipx Positions of cellsA Matlab structure for each organism contains the x positions of identified cells in the microchannel. Each structure contains the flowrate and the x positions measured at that flow rate. These data were used in producing the cell concentration profiles in Figure 2.xPositions.zipCell orientationsMatlab structures contain the positions and angular orientations of cells for CCMP 452 and CCMP1320 in different flow conditions. Positions are given in pixels. Pixel size is 17 microns. For CCMP 452, a magnification of 6x was used. For CCMP 1320, a magnification of 15x was used. Area of cells is given in pixels. Note that the mean shear in the channel is half of the flow rate.orientations.zipCell trajectories in flowMatlab structures contain measured cell trajectories at the flow rate corresponding to a mean channel shear of 2.5 s^-1. These trajectories were used to produce the angular velocity plots in Figure 4.trajectoriesInFlow.zip
DOI: 10.5061/dryad.d6108
title: Data from: Unrecognized coral species diversity masks differences in functional ecology

description: Porites corals are foundation species on Pacific reefs but a confused
 taxonomy hinders understanding of their ecosystem function and responses
 to climate change. Here, we show that what has been considered a single
 species in the eastern tropical Pacific, Porites lobata, includes a
 morphologically similar yet ecologically distinct species, Porites
 evermanni. While P. lobata reproduces mainly sexually, P. evermanni
 dominates in areas where triggerfish prey on bioeroding mussels living
 within the coral skeleton, thereby generating asexual coral fragments.
 These fragments proliferate in marginal habitat not colonized by P.
 lobata. The two Porites species also show a differential bleaching
 response despite hosting the same dominant symbiont subclade. Thus, hidden
 diversity within these reef-builders has until now obscured differences in
 trophic interactions, reproductive dynamics and bleaching susceptibility,
 indicative of differential responses when confronted with future climate
 change.
description: Multilocus genotypes
 from all sitesThis file contains
 multilocus genotypes generated by fragment analysis of PCR amplicon using
 an ABI 3730 with an internal size standard (Genescan LIZ-500, Applied
 Biosystems, CA). Electropherograms were visualized and allele sizes were
 called using GENEMAPPER v 4.0 (Applied Biosystems, CA). Samples that
 failed to amplify more than 2 of 11 loci were excluded from the analysis.
 Alleles are labeled by their 3-digit fragment size. Alleles are
 concatenated for each locus giving a 6-digit genotype for each primer.
 Missing data is coded as "0".Sample names contain a two-digit
 code for the year followed by an underscore and a four-digit identifier
 for each colony sampled. Together this 6-digit number provides a unique
 identifier for each sample.Boulayetal.2013_MLGs.xlsxCompressed file of coral photographsUnaltered photos of sampled coral colonies at sites sympatric for Porites lobata and P. evermanni. Photos were scaled using a ruler included in each photograph in the program AXIOVISION 4.8 (Zeiss, Germany). Visible surface area in each photo was measured using the Trace tool in AXIOVISION. Discernible mussel holes were counted using the event tool in AXIOVISION. File names do not reveal species identity. File names contain a two-digit code for the year followed by an underscore and a four-digit identifier for each colony sampled. Together this 6-digit number provides a unique identifier for each colony sampled/photographed. Multiple photographs were taken for each colony. The letter following the photograph allows each photo to have a unique identifier. Photos deemed too far or out of focus were not uploaded.Boulayetal.2013_photos.zip
DOI: 10.15468/dl.8nm9ce
title: Occurrence Download

description: A dataset containing 14058 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Meles meles"
 ]
}

 The dataset includes 14058 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000357-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.2g3s4
title: Data from: Suitability of different mapping algorithms for genome-wide polymorphism scans with Pool-Seq data.

description: The cost-effectiveness of sequencing pools of individuals (Pool-Seq)
 provides the basis for the popularity and wide-spread use of this method
 for many research questions, ranging from unravelling the genetic basis of
 complex traits to the clonal evolution of cancer cells. Because the
 accuracy of Pool-Seq could be affected by many potential sources of error,
 several studies determined, for example, the influence of the sequencing
 technology, the library preparation protocol, and mapping parameters.
 Nevertheless, the impact of the mapping tools has not yet been evaluated.
 Using simulated and real Pool-Seq data, we demonstrate a substantial
 impact of the mapping tools leading to characteristic false positives in
 genome-wide scans. The problem of false positives was particularly
 pronounced when data with different read lengths and insert sizes were
 compared. Out of 14 evaluated algorithms novoalign, bwa mem and clc4 are
 most suitable for mapping Pool-Seq data. Nevertheless, no single algorithm
 is sufficient for avoiding all false positives. We show that the
 intersection of the results of two mapping algorithms provides a simple,
 yet effective strategy to eliminate false positives. We propose that the
 implementation of a consistent Pool-seq bioinformatics pipeline building
 on the recommendations of this study can substantially increase the
 reliability of Pool-Seq results, in particular when libraries generated
 with different protocols are being compared.
description: Simulated data:
 comparing allele frequencies with FSTfst.zipSimulated data: with SNPs (no indels)ref-snps.zipSimulated data: with SNPs and indelsref-snpsrandposindel.zipScripts used for the analysisscripts.zip
DOI: 10.5061/dryad.m5j1rs3
title: Data from: Biochar application on paddy and purple soils in southern China: soil carbon and biotic activity

description: Soil carbon reserves are the largest terrestrial carbon pools. Common
 agricultural practices, such as high fertilization rates and intensive
 crop rotation, have led to global-scale environmental changes, including
 decreased soil organic matter, lower carbon/nitrogen ratios, and
 disruption of soil carbon pools. These changes have resulted in a decrease
 in soil microbial activity, severe reduction in soil fertility, and
 transformation of soil nutrients, thereby causing soil nutrient imbalance,
 which seriously affects crop production. In this study, 16S rDNA-based
 analysis and static chamber-gas chromatography were used to elucidate the
 effects of continuous application of straw biochar on soil carbon pools
 and the soil microbial environments of two typical soil types (purple and
 paddy soils) in southern China. Application of biochar (1) improved the
 soil carbon pool and its activity, (2) significantly promoted the release
 of soil CO2, and (3) improved the soil carbon environment. Soil carbon
 content was closely correlated with the abundance of organisms belonging
 to two orders, Lactobacillales and Bacteroidales, and, more specifically,
 to the genus Lactococcus. These results suggest that biochar affects the
 soil carbon environment and soil microorganism abundance, which in turn
 may improve the soil carbon pool.
description: data for soil
 microorganismthe data was for the
 microorganism of two kinds of soil(purple soil and paddy soil) in southern
 China
DOI: 10.5061/dryad.7vn81m1
title: Data from: Video education versus face-to-face education on inhaler technique for patients with well-controlled or partly-controlled asthma: a phase IV, open-label, non-inferiority, multicenter, randomized, controlled trial

description: Background: Education on inhaler technique is critical for effective
 asthma treatment. However, traditionally used face-to-face education is a
 time-consuming, costly, and often laborious. The current study evaluated
 the efficacy of a newly developed video-based inhaler technique education
 method. Methods: A total of 184 subjects with well-controlled or
 partly-controlled asthma were enrolled from 12 hospitals in South Korea
 from 30 November 2015 to 01 June 2016. Subjects were randomly divided into
 two groups in a 1:1 ratio; a control group that received face-to-face
 education, and an study group that received video education. All subjects
 received fluticasone propionate plus salmeterol xinafoate (Fluterol®
 250/50 inhalation capsules) for 12 weeks. The primary outcome measure was
 forced expiratory volume in the 1st second (FEV1) at 12 weeks. The
 secondary outcome measures were change in FEV1 at 4 weeks, change in
 asthma control test (ACT) score, and changes in various inhaler technique
 parameters. These measures were assessed with a non-inferiority margin of
 10% between the control group and the study group. Results: FEV1 was
 significantly improved at 12 weeks in the control group and the study
 group. After adjustment, FEV1 improvement was not significantly inferior
 in the study group compared to the control group. The secondary outcome
 measures, including change in FEV1 at 4 weeks, ACT score, and various
 parameters pertaining to inhaler technique and satisfaction at 4 and 12
 weeks did differ not significantly in the two groups. In subgroup analysis
 of elderly subjects and subjects with well-controlled asthma, FEV1 was
 significantly improved at 12 weeks in the study group but not the control
 group. Conclusion: The newly developed video education technique
 investigated functioned as a suitable substitute for face-to-face
 education on inhaler technique (dry powder inhalation capsule) in patients
 with stable asthma, particularly in elderly patients and patients with
 well-controlled asthma.
description: Supplementary file
 3See
 the README file for a transcript of the video with an English
 translation.supplementary_file_3.mp4
DOI: 10.5061/dryad.4rp68
title: Data from: Latent homology and convergent regulatory evolution underlies the repeated emergence of yeasts

description: Convergent evolution is common throughout the tree of life, but the
 molecular mechanisms causing similar phenotypes to appear repeatedly are
 obscure. Yeasts have arisen in multiple fungal clades, but the genetic
 causes and consequences of their evolutionary origins are unknown. Here we
 show that the potential to develop yeast forms arose early in fungal
 evolution and became dominant independently in multiple clades, most
 likely via parallel diversification of Zn-cluster transcription factors, a
 fungal-specific family involved in regulating yeast–filamentous switches.
 Our results imply that convergent evolution can happen by the repeated
 deployment of a conserved genetic toolkit for the same function in
 distinct clades via regulatory evolution. We suggest that this mechanism
 might be a common source of evolutionary convergence even at large time
 scales.
description: concat100_singleML_rerootOrganismal phylogenyDollo_mapping_withorphangenesDollo-parsimony reconstruction of duplication-loss histories across 49 genomes. Mapping includes orhpan genesDollo_mapping_withoutorphangenesDollo-parsimony mapping without orhpan genesMCLclustering_infl2MCL clustering of proteins in the 49 genomes.OrthogroupMatrix_withorphangenesNexus matrix of reconstructed orthogroups, including orphan genesOrthogroupMatrix_withoutorphangenesNexus matrix of reconstructed orthogroups, excuding orphan genes.outfile95_newNexus data file used for organismal phylogeny reconstruction under a site exclusion threshold of 0.95.outfile98_newNexus data file used for organismal phylogeny reconstruction under a site exclusion threshold of 0.98.outfile100_newNexus data file used for organismal phylogeny reconstruction under a site exclusion threshold of 1.0.Proteins_seqs_all59species_inputMerged protein fasta file of all predicted proteins used in the analyses.
DOI: 10.5061/dryad.t29p3
title: Data from: Vertical exploration and dimensional modularity in mice

description: Exploration is a central component of animal behaviour studied extensively
 in rodents. Previous tests of free exploration limited vertical movement
 to rearing and jumping. Here we attach a wire mesh to the arena wall,
 allowing vertical exploration. This provides an opportunity to study the
 morphogenesis of behaviour along the vertical dimension, and examine the
 context in which it is performed. In the current setup, the mice first use
 the doorway as a point reference for establishing a borderline linear path
 along the circumference of the arena floor, and then use this path as a
 linear reference for performing horizontal forays towards the center
 (incursions) and vertical forays on the wire mesh (ascents). Vertical
 movement starts with rearing on the wall, and commences with straight
 vertical ascents that increase in extent and complexity. The mice first
 reach the top of the wall, then mill about within circumscribed horizontal
 sections, and then progress horizontally for increasingly longer distances
 on the upper edge of the wire mesh. Examination of the sequence of
 borderline segments, incursions and ascents reveals dimensional
 modularity: an initial series ("bout") of borderline segments
 precedes alternating bouts of incursions and bouts of ascents, thus
 exhibiting sustained attention to each dimension separately. The exhibited
 separate growth in extent and in complexity of movement and the sustained
 attention to each of the three dimensions disclose the mice's modular
 perception of this environment and validate all three as natural kinds.
description: Vertical exploration
 dataThis .rar contains all
 required data for Vertical exploration and dimensional modularity in mice.
 The directory "Track Data" and its subdirectories contain CSV
 files for all mice with the 2D tracking coordinates calculated in
 Ethovision XT. The directory "RSEE data" and subdirectories
 contain Rdata files for all mice with initial data preparation. The
 directory "Individual Analysis Data" and its subdirectories
 contain Rdata files for all mice with analysis results.DATA.rarCodeR code for the data preparation and analysis performed in the paper, including the modified arena builder algorithm and the transformation from 2D to 3D. The analysis further requires an R package called "RSEE". For more information: https://www.tau.ac.il/~ilan99/see/index.html
DOI: 10.15468/dl.92azfv
title: Occurrence Download

description: A dataset containing 17971 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Daphne cneorum"
 ]
}

 The dataset includes 17971 records from 378 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000358-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/r7zsw3
title: Trail Routes

description: Shape file and associated files tracing trail routes.
DOI: 10.7910/dvn/yt25ip
title: Predicting with Baidu Index and Google Trends

description: documents for the paper "Predicting Chinese consumption using data from Baidu and Google"
DOI: 10.7910/dvn/yt45ao
title: Replication Data for: Estimating the Effects of the English Rule on Litigation Outcomes

description: Replication Data for: Estimating the Effects of the English Rule on Litigation Outcomes
DOI: 10.7910/dvn/yucfsx
title: Petition of John Pohpnehonnuwoh

description: &lt;p&gt;Petition subject: Property &lt;/p&gt; &lt;p&gt;Original: &lt;a href="http://nrs.harvard.edu/urn-3:FHCL:28548190"&gt;http://nrs.harvard.edu/urn-3:FHCL:28548190&lt;/a&gt; &lt;/p&gt; &lt;p&gt;Date of creation: 1760-12-27 &lt;/p&gt; &lt;p&gt;Petition location: Stockbridge &lt;/p&gt; &lt;p&gt;Selected signatures:&lt;ol&gt;&lt;li&gt;John Pohpnehonnuwoh&lt;/li&gt;&lt;li&gt;Benjamin Kaukewenaunaunt&lt;/li&gt;&lt;li&gt;Johannis Mtohksin&lt;/li&gt;&lt;/ol&gt; &lt;/p&gt; &lt;p&gt;Actions taken on dates: 1761-01-27,1761-01-27 &lt;/p&gt; &lt;p&gt;Legislative action: Received and read and granted in the House on January 27, 1761 and sent for concurrence and received and read and concurred in the Council on January 27, 1761 &lt;/p&gt; &lt;p&gt;Total signatures: 3 &lt;/p&gt; &lt;p&gt;Legislative action summary: Received, read, granted, sent, received, read, concurred &lt;/p&gt; &lt;p&gt;Males of color signatures: 3 &lt;/p&gt; &lt;p&gt;Female only signatures: No &lt;/p&gt; &lt;p&gt;Identifications of signatories: John Pophnehonnuwoh, Benjamin Kokhkewenaunaut and Johannes Mtohksin all of Stockbridge in the County of Hampshire, [males of color], ["Stockbridge Indians"] &lt;/p&gt; &lt;p&gt;Prayer format was &lt;a href="http://en.wikipedia.org/wiki/Printing"&gt;printed&lt;/a&gt; vs. &lt;a href="http://en.wikipedia.org/wiki/Manuscript"&gt;manuscript&lt;/a&gt;: Manuscript &lt;/p&gt; &lt;p&gt;Native American tribe: Stockbridge-Munsee &lt;/p&gt; &lt;p&gt;Acknowledgements: Supported by the National Endowment for the Humanities (PW-5105612), Massachusetts Archives of the Commonwealth, Radcliffe Institute for Advanced Study at Harvard University, Center for American Political Studies at Harvard University, Institutional Development Initiative at Harvard University, and Harvard University Library.&lt;/p&gt; &lt;p&gt;Additional archivist notes: Konkapot, minister, religious, church, Reverend Stephen West, lands, settlements, proprietors, Boston, clergy, Jonathan Edwards, Orphan Farm, deeds, James Otis, Andrew Oliver, Francis Bernard &lt;/p&gt; &lt;p&gt;Location of the petition at the Massachusetts Archives of the Commonwealth: Massachusetts Archives volume 33, pages 154-155 &lt;/p&gt;
DOI: 10.7910/dvn/8ynxvw
title: Registrations in the AEA RCT Registry (2013-05-15 through 2023-11-01)

description: This dataset contains publicly available data on the American Economic Association's RCT registry downloaded 2023-11-01
DOI: 10.7910/dvn/9hld9e
title: Wuhu

description: Wuhu is a series of tables and text files associated with: Annual trade report and returns - 1923. Created by: China. Hai guan zong shui wu si shu.
description: Annual trade report and returns - 1923