cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.7zbdp7
title: Occurrence Download

description: A dataset containing 360 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phalera grotei Moore, 1859"
 ]
}

 The dataset includes 360 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0277857-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g9wfyy
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Zeuxine elatior Schltr."
 ]
}

 The dataset includes 8 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036256-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3nz2g4
title: Occurrence Download

description: A dataset containing 4265 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "TaxonKey is Unionida"
 ]
}

 The dataset includes 4265 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0280486-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rd7qxb
title: Occurrence Download

description: A dataset containing 656 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Monitoreo satelital de condor andino (Vultur gryphus) en Ecuador"
 ]
}

 The dataset includes 656 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008395-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9t4xut
title: Occurrence Download

description: A dataset containing 5269 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trifolium wormskioldii Lehm."
 ]
}

 The dataset includes 5269 records from 173 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020950-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kzt3cy
title: Occurrence Download

description: A dataset containing 116 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cnemaspis spinicollis (Müller, 1907)"
 ]
}

 The dataset includes 116 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0281994-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v7z4jt
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bacteriovoracia",
 "HasCoordinate is true",
 "Country is one of (Denmark)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 55 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222550-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.32jm7d
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bdellovibrionia",
 "HasCoordinate is true",
 "Country is one of (Denmark)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 69 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222554-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q7emjk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ardenticatenia",
 "HasCoordinate is true",
 "Country is one of (Denmark)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0222561-210914110416597/datasets/export for details.
DOI: 10.15468/dl.ht246h
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Issue is Geodetic datum assumed WGS84",
 "TaxonKey is Micrurus laticollaris Peters, 1870"
 ]
}

 The dataset includes 26 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002348-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wdk9zr
title: Occurrence Download

description: A dataset containing 2133882 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2133882 records from 1174 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012621-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-ouc112542578
title: The whole truth [newspaper], vol. 7, no. 6 (1974 July)

description: The whole truth [newspaper], vol. 7, no. 6 (1974 July).
DOI: 10.15468/dl.3nwqdb
title: Occurrence Download

description: A dataset containing 1276 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stevia origanoides Kunth"
 ]
}

 The dataset includes 1276 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0144225-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.urp3nb
title: Occurrence Download

description: A dataset containing 170 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Charadrahyla pinorum (Taylor, 1937)"
 ]
}

 The dataset includes 170 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0120882-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gkqhh4
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chiromantis simus (Annandale, 1915)"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0306881-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gccv9c
title: Occurrence Download

description: A dataset containing 2713 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pulsatrix koeniswaldiana (M.Bertoni & W.Bertoni, 1901)"
 ]
}

 The dataset includes 2713 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0120881-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-ouc112542572
title: The whole truth [newspaper], vol. 7, no. 1 (1974 Feb.)

description: The whole truth [newspaper], vol. 7, no. 1 (1974 February). Monthly.
DOI: 10.25549/pcra-ouc112542570
title: The whole truth [newspaper], vol. 7, no. 6 (1973 June)

description: The whole truth [newspaper], vol. 7, no. 6 (1973 June). Monthly.
DOI: 10.15468/dl.rkknu8
title: Occurrence Download

description: A dataset containing 9891058 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is China"
 ]
}

 The dataset includes 9891058 records from 5050 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0144212-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d2srnz
title: Occurrence Download

description: A dataset containing 136 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hymenostylium recurvirostrum (Hedw.) Dixon"
 ]
}

 The dataset includes 136 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029385-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12775361
title: Data accompanying "Identification of capsid-like proteins in venomous and parasitic animals"

description: This data accompanies the pub "Identification of capsid-like proteins in venomous and parasitic animals". The DOI for this pub is https://doi.org/10.57844/arcadia-14b2-6f27

 

Files and folders included: 

 

1. Manually annotated results of searching VOG HMMs against venom transcriptomes: Annotated_capsid_no_cutoffs_summary_with_seqs_05092024.xlsx

2. Manually annotated results of running preHGT on the genomes of venomous species: Annotated_hgt_results_venom_050924.xlsx

3. The genomes we input into preHGT: preHGT_input_genomes.csv

4. Genbank files of the genomic neighborhood of putatively horizontally transferred viral genes in the tick genome. There are seven GenBank files, one for each contig. Named with protein name.

5. BLAST results from searching putatively endogenized viral proteins against tick salivary transcriptomes:  TSA_blast_results.csv

6. Results from searching the putatively endogenized viral capsid proteins against AlphaFold/UniProt50 version 4, AlphaFold/Swiss-Prot version 4, and AlphaFold/Proteome version 4 using the Foldseek webserver: Foldseek_capsid_followup_05092024.xlsx

7. Newick files of the three trees displayed in Figure 3 and Figure 5 .
DOI: 10.5281/zenodo.12775362
title: Data accompanying "Identification of capsid-like proteins in venomous and parasitic animals"

description: This data accompanies the pub "Identification of capsid-like proteins in venomous and parasitic animals". The DOI for this pub is https://doi.org/10.57844/arcadia-14b2-6f27

 

Files and folders included: 

 

1. Manually annotated results of searching VOG HMMs against venom transcriptomes: Annotated_capsid_no_cutoffs_summary_with_seqs_05092024.xlsx

2. Manually annotated results of running preHGT on the genomes of venomous species: Annotated_hgt_results_venom_050924.xlsx

3. The genomes we input into preHGT: preHGT_input_genomes.csv

4. Genbank files of the genomic neighborhood of putatively horizontally transferred viral genes in the tick genome. There are seven GenBank files, one for each contig. Named with protein name.

5. BLAST results from searching putatively endogenized viral proteins against tick salivary transcriptomes:  TSA_blast_results.csv

6. Results from searching the putatively endogenized viral capsid proteins against AlphaFold/UniProt50 version 4, AlphaFold/Swiss-Prot version 4, and AlphaFold/Proteome version 4 using the Foldseek webserver: Foldseek_capsid_followup_05092024.xlsx

7. Newick files of the three trees displayed in Figure 3 and Figure 5 .
DOI: 10.15468/dl.pr24qp
title: Occurrence Download

description: A dataset containing 386 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is Psalmopoeus Pocock, 1895"
 ]
}

 The dataset includes 386 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029386-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u5dsu3
title: Occurrence Download

description: A dataset containing 452 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "TaxonKey is Hypnum cupressiforme Hedw."
 ]
}

 The dataset includes 452 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029387-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w9anjq
title: Occurrence Download

description: A dataset containing 2771 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Acacia elongata Sieber ex DC."
 ]
}

 The dataset includes 2771 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029388-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.esr34s
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Isotachis lopezii (R.M.Schust.) Gradst."
 ]
}

 The dataset includes 90 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029389-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12775437
title: source data figures De Vries 2024 (Comm. E&E)

description: This is the source data for producing the manuscript figures of De Vries et al. (2024) Comm. Earth & Env.
DOI: 10.5281/zenodo.12775438
title: source data figures De Vries 2024 (Comm. E&E)

description: This is the source data for producing the manuscript figures of De Vries et al. (2024) Comm. Earth & Env.
DOI: 10.18430/m37orv
title: X-ray diffraction data for the non-structural protein 10 (nsp10) from SARS CoV-2 in complex with fragment VT00239 (7ORV)
DOI: 10.15468/dl.v2ufct
title: Occurrence Download

description: A dataset containing 813 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-102.15521 23.51572,-99.24589 23.51572,-99.24589 28.17064,-102.15521 28.17064,-102.15521 23.51572))",
 "OccurrenceStatus is Present",
 "TaxonKey is Salticidae"
 ]
}

 The dataset includes 813 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029394-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x249f2
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "TaxonKey is Isotachis obtusa Steph."
 ]
}

 The dataset includes 68 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029396-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/8986762
title: Distribution of soil lifespans
DOI: 10.15468/dl.2ah5ap
title: Occurrence Download

description: A dataset containing 536 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lindera melissifolia (Walter) Blume"
 ]
}

 The dataset includes 536 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029398-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zvyema
title: Occurrence Download

description: A dataset containing 431 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "TaxonKey is Isotachis serrulata (Sw.) Gottsche"
 ]
}

 The dataset includes 431 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029399-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15151/esrf-es-1826069875
title: Room-temperature X-ray radiation damage to protein crystals using serial crystallography in the EBS context.

description: Radiation damage is a major limitation in protein crystallography, especially at room temperature (RT), which can lead to incorrect biological interpretation.. Cryo-cooled samples (~100K) have now been used for decades to slow down its progression (~100 fold compared to RT) but such cryo-protection reduces the functionally-relevant conformational heterogeneity of the crystalline sample. 
RT data collection recently rejuvenated, through the advent of serial crystallography, in which the X-ray dose deposited on the sample is spread over a large number of microcrystals (typically tens of thousands). In a seminal experiment on ID13, we were able to characterize the progression of radiation damage at RT. However, with the recent EBS upgrade, a 10-fold increase in photon flux density has been obtained on ID13; we therefore propose to reproduce the experiment in these new conditions, to fundamentally understand the mechanism of radiation damage progress at such extreme photon regimes,.
DOI: 10.15468/dl.94t69u
title: Occurrence Download

description: A dataset containing 262 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Material citation)",
 "DatasetKey is one of (UCM Amphibian and Reptile Collection (Arctos), Fortalecimiento de las colecciones de ECOSUR. Primera fase (Herpetológica Chetumal), Digitalización y Sistematización de las Colecciones Biológicas Nacionales del Instituto de Biología, UNAM (vertebrados), Universidad del Valle de Guatemala - Colecciones Biológicas - Reptiles, MVZ Herp Collection (Arctos), Herpetofauna del Estado de Veracruz, Sistematización de las colecciones científicas del Instituto de Historia Natural y Ecología, (IHNE) Chiapas, Actualización y enriquecimiento de las bases de datos del proyecto de evaluación y análisis geográfico de la diversidad faunística de Chiapas, Computarización de las colecciones de vertebrados terrestres de la Escuela Nacional de Ciencias Biológicas, IPN Fase 4 (Anfibios y reptiles), Formación de una base de datos y elaboración de un atlas de la herpetofauna de México (Anfibiosreptiles))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is one of (ff90b050-c256-11db-b71b-b8a03c50a862, 4cadac10-3e7b-11d9-8439-b8a03c50a862, 5c1a4c27-795a-4294-aecc-46d7176706b7, 8edbbde0-055e-11d8-b850-b8a03c50a862, b554c320-0560-11d8-b851-b8a03c50a862, ff418020-1d67-11d9-8435-b8a03c50a862, bc092ff0-02e4-11dc-991f-b8a03c50a862, 66522820-055c-11d8-b84e-b8a03c50a862, 52c8f620-1816-11da-9544-b8a03c50a862, b4640710-8e03-11d8-b956-b8a03c50a862)",
 "TaxonKey is Sphaerodactylus glaucus Cope, 1866",
 "Year 1950-2024"
 ]
}

 The dataset includes 262 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029400-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26304658
title: Taxonomía de Sistemas en Educación Superior, v1

description: The content is a Taxonomy of Software Systems in Higher-Education Institutions
DOI: 10.6084/m9.figshare.26304658.v2
title: Taxonomía de Sistemas en Educación Superior, v1

description: The content is a Taxonomy of Software Systems in Higher-Education Institutions
DOI: 10.6084/m9.figshare.26304658.v1
title: TaxonomíaSistemasEducaciónSuperior_v1_15Jul.xlsx

description: The content is a Taxonomy of Software Systems in Higher-Education Institutions
DOI: 10.15468/dl.d7cdvt
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-70.84131 -20.14722,-68.08685 -20.14722,-68.08685 -18.19287,-70.84131 -18.19287,-70.84131 -20.14722))",
 "HasGeospatialIssue is false",
 "TaxonKey is Phyllodactylus gerrhopygus (Wiegmann, 1834)"
 ]
}

 The dataset includes 42 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029403-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yznejm
title: Occurrence Download

description: A dataset containing 536 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lindera melissifolia (Walter) Blume"
 ]
}

 The dataset includes 536 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029402-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34683/sr1859
title: StoneRounds Case: SR1859
title: AR Stargardt Disease

description: StoneRounds Case SR1859 was diagnosed with AR Stargardt Disease likely caused by mutations in the gene: ABCA4.
DOI: 10.15468/dl.z2su59
title: Occurrence Download

description: A dataset containing 262 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Material citation)",
 "DatasetKey is one of (UCM Amphibian and Reptile Collection (Arctos), Fortalecimiento de las colecciones de ECOSUR. Primera fase (Herpetológica Chetumal), Digitalización y Sistematización de las Colecciones Biológicas Nacionales del Instituto de Biología, UNAM (vertebrados), Universidad del Valle de Guatemala - Colecciones Biológicas - Reptiles, MVZ Herp Collection (Arctos), Herpetofauna del Estado de Veracruz, Sistematización de las colecciones científicas del Instituto de Historia Natural y Ecología, (IHNE) Chiapas, Actualización y enriquecimiento de las bases de datos del proyecto de evaluación y análisis geográfico de la diversidad faunística de Chiapas, Computarización de las colecciones de vertebrados terrestres de la Escuela Nacional de Ciencias Biológicas, IPN Fase 4 (Anfibios y reptiles), Formación de una base de datos y elaboración de un atlas de la herpetofauna de México (Anfibiosreptiles))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "PublishingOrg is one of (ff90b050-c256-11db-b71b-b8a03c50a862, 4cadac10-3e7b-11d9-8439-b8a03c50a862, 5c1a4c27-795a-4294-aecc-46d7176706b7, 8edbbde0-055e-11d8-b850-b8a03c50a862)",
 "TaxonKey is Sphaerodactylus glaucus Cope, 1866",
 "Year 1950-2024"
 ]
}

 The dataset includes 262 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029405-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5h12vk3p
title: MassIVE MSV000095377 - Kirk Lab MS for Campbell JCI 2024
title: MS of WT, HCM, and DCM EHts for Campbell JCI paper 2024.
DOI: 10.18430/m36wxc
title: X-ray diffraction data for the crystal Structure of NSP15 Endoribonuclease from SARS CoV-2 in the Complex with potential repurposing drug Tipiracil (6WXC)