cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25740/qm955pf6906
title: Geometrical compartmentalization of trigger waves

description: Trigger waves, self-regenerating fronts of biochemical activity that spread without losing speed or amplitude, are widespread in cell signaling. Apoptosis is one example of a process that propagates through the cytoplasm via trigger waves. Curiously, in some contexts, like synaptic pruning, apoptotic caspase activation is confined to specific subcellular regions. We hypothesized that at junctions between a thin cytoplasmic extension, like a dendritic spine, and a thicker one, like a dendrite, trigger wave propagation may be blocked even though diffusion is not, as a result of the general properties of trigger waves and bistable systems. This hypothesis was explored theoretically through modeling studies and dimensional arguments, which confirmed that trigger wave compartmentalization was possible and that the critical channel width required for compartmentalization was likely to be biologically relevant. These predictions were then tested experimentally with undiluted Xenopus egg extracts that were induced to undergo apoptosis. We found that channels that are less than a few microns in diameter are small enough to compartmentalize apoptosis, and that the critical width is inversely proportional to trigger wave speed. Thus, cellular projections and tubules can allow for the compartmentalization of biochemical states within a spatially continuous cytoplasm, a fundamental yet previously overlooked mechanism for controlling biochemical signaling and cellular functions.
DOI: 10.15468/dl.mrw49w
title: Occurrence Download

description: A dataset containing 148 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alchemilla ellenbeckii",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 148 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027163-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2nu3j7
title: Occurrence Download

description: A dataset containing 28037 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Smilax bona-nox"
 ]
}

 The dataset includes 28037 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027161-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/27249
title: Chandra X-ray Observatory ObsId 27249

description: Young Massive Stars in the Giant HII Region W31 Main (G10.2-0.3)
DOI: 10.15468/dl.c3kfxa
title: Occurrence Download

description: A dataset containing 6618 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Chalybion"
 ]
}

 The dataset includes 6618 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027164-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17053380
title: Machine Learning-Based Ozone Parameterization - Dataset

description: Data to produce the content of paper submitted to JAMES "mloz: A Highly Efficient Machine Learning-Based Ozone Parameterization for Climate Sensitivity Simulations".
DOI: 10.5281/zenodo.17053381
title: Machine Learning-Based Ozone Parameterization - Dataset

description: Data to produce the content of paper submitted to JAMES "mloz: A Highly Efficient Machine Learning-Based Ozone Parameterization for Climate Sensitivity Simulations".
DOI: 10.15468/dl.gnx9c2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Equisetum telmateia",
 "Geometry POLYGON ((4.350227 50.78323, 4.350227 50.79168, 4.3597 50.79168, 4.3597 50.78323, 4.350227 50.78323))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027165-250827131500795/datasets/export for details.
DOI: 10.15468/dl.m848bb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zosterops maderaspatanus",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027166-250827131500795/datasets/export for details.
DOI: 10.15468/dl.jzs774
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Silene dioica",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 14 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027167-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9xtre3
title: Occurrence Download

description: A dataset containing 565 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Silene dioica",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 565 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027168-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2p4h9n
title: CCDC 2476971: Experimental Crystal Structure Determination

description: Related Article: Richard S. Hong, Alessandra Mattei, Mark E. Tuckerman, Ahmad Y. Sheikh
|2025|Communications Chemistry|8|229|doi:10.1038/s42004-025-01618-8
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.5843fu
title: Occurrence Download

description: A dataset containing 616 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myrmotherula behni"
 ]
}

 The dataset includes 616 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027169-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/6413
title: DES-Reasoning-DeepSeek-V3.1
DOI: 10.15468/dl.9wa87s
title: Occurrence Download

description: A dataset containing 267 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Silene dioica",
 "Country is Iceland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 267 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027170-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jekgdf
title: Occurrence Download

description: A dataset containing 208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alchemilla fischeri",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 208 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027172-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qvd7hk
title: Occurrence Download

description: A dataset containing 164 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Telestes pleurobipunctatus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 164 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027173-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sqxr4z
title: Occurrence Download

description: A dataset containing 521 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Simulium ochraceum"
 ]
}

 The dataset includes 521 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027171-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t9znhe
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fallopia japonica",
 "Geometry POLYGON ((4.350227 50.78323, 4.350227 50.79168, 4.3597 50.79168, 4.3597 50.78323, 4.350227 50.78323))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027174-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.82nnmw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zosterops kirki",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027175-250827131500795/datasets/export for details.
DOI: 10.15468/dl.n6eu6h
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Silene dioica",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027177-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rvtywb
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Silene dioica",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027176-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ztzkf7
title: Occurrence Download

description: A dataset containing 616 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Silene dioica",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 616 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027178-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.za2edu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Festuca rubra",
 "Geometry POLYGON ((4.350227 50.78323, 4.350227 50.79168, 4.3597 50.79168, 4.3597 50.78323, 4.350227 50.78323))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027179-250827131500795/datasets/export for details.
DOI: 10.15468/dl.y48d78
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alchemilla gracilipes",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 39 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027180-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57969/s96k52
title: Lagrangian Drifter Laboratory at Scripps Institution of Oceanography CALYPSO Directional Wave Spectra Drifter (DWSD) Sensor Data
DOI: 10.15468/dl.2nhmq9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zosterops mayottensis",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027181-250827131500795/datasets/export for details.
DOI: 10.5281/zenodo.17000851
title: OPA_MASTER_1-128

description: Pending Update Notice

We are preparing a consolidated update to The Living Fold framework and the associated Periodic Atlas v2.4 dataset. This update will:



Clarify scarcity vectors — distinguishing the baseline geometric registry from the effective predictive registry with echo-lift.

Audit ΔL implementation — correcting a normalization mismatch that caused Oxygen (Z=8) and a few other entries to appear as gate violations in the CSV despite being lawful closures in the manuscript.

Refine calibration language — constants such as and environmental coefficients will be explicitly marked as geometric derivations with empirical modulation, ensuring transparency and consistency.


This update will align the dataset with the published manuscript so that both present a unified and internally consistent framework.

The updated files (v2.5) will be released shortly.

This dataset is the computational atlas generated through the Octomorphic Pipeline (OPA Phases 1–26), culminating in the unified periodic registry table of 128 entries. It extends the Living Fold framework by explicitly filling the scarcity-driven registry with lawful values derived from the octonionic kernel , subject to the canonical gates .

The atlas demonstrates how the registry structure—previously articulated in The Living Fold https://zenodo.org/records/16920192 (§3 Scarcity and the Registry; §6 Magic Numbers and π³ Shell Theory; §8 Periodic Architecture)—is concretely realized across all 128 admissible seats, including environment-tuned echo-lift capacities.

This file therefore serves as the explicit computational backbone for the Living Fold proofs:



Registry Exhaustion Values (Appendix F).

Scarcity Vector Validation (§3.2).

Periodic Architecture Mapping (§8).

https://zenodo.org/records/16920192


Researchers can use the atlas both as a verification tool and as a direct bridge between the theoretical registry and observed periodic/chemical architecture.

This is a living document and will have several forthcoming revisions

Author Brian Simpson licensed under the octomorphic open license version 1.1
DOI: 10.15468/dl.j26syd
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Nothobranchius sainthousei)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027182-250827131500795/datasets/export for details.
DOI: 10.15468/dl.9rgcmr
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fraxinus excelsior",
 "Geometry POLYGON ((4.350227 50.78323, 4.350227 50.79168, 4.3597 50.79168, 4.3597 50.78323, 4.350227 50.78323))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027184-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57969/s92s34
title: Lagrangian Drifter Laboratory at Scripps Institution of Oceanography CALYPSO Directional Wave Spectra Drifter (DWSD) First-Five Data
DOI: 10.15468/dl.4mfumk
title: Occurrence Download

description: A dataset containing 310 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alchemilla johnstonii",
 "Geometry POLYGON ((-17.62504 -34.81917, 51.13387 -34.81917, 51.13387 37.34999, -17.62504 37.34999, -17.62504 -34.81917))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 310 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027185-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q77zja
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zosterops chloris",
 "Country is one of (Myanmar, Thailand, Lao People’s Democratic Republic, Cambodia, Viet Nam, Malaysia)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027186-250827131500795/datasets/export for details.
DOI: 10.15468/dl.scp5ra
title: Occurrence Download

description: A dataset containing 303 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Silene gracilis",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 303 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027187-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gk7bn3
title: Occurrence Download

description: A dataset containing 2782 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "OccurrenceStatus is Present",
 "TaxonKey is Bulimulus bonariensis"
 ]
}

 The dataset includes 2782 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027188-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hwd4p5
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Galium aparine",
 "Geometry POLYGON ((4.350227 50.78323, 4.350227 50.79168, 4.3597 50.79168, 4.3597 50.78323, 4.350227 50.78323))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027189-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57969/s9b88b
title: Lagrangian Drifter Laboratory at Scripps Institution of Oceanography CALYPSO Surface Velocity Program (SVP) Drifter Data
DOI: 10.15472/017mzy
title: Identificación de insectos plaga y benéficos del café en Colombia

description: La información corresponde a colectas de especímenes de especies silvestres de la diversidad biológica con fines de investigación científica no comercial, bajo un permiso Marco de Recolección otorgado por el Ministerios de Ambiente y Desarrollo Sostenible. Cubriendo una temporalidad desde el año 1985 hasta el 2024, el recurso contaba con 922 registros pertenecientes a 15 departamentos. Para el primer semestre de 2025, se añaden 22 nuevos registros de insectos plaga y benéficos del café en Colombia colectados durante los meses de mayo y julio en diferentes regiones de la zona cafetera de Colombia.
DOI: 10.15468/dl.txpc9f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sundoreonectes sabanus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027190-250827131500795/datasets/export for details.
DOI: 10.15468/dl.tszyn7
title: Occurrence Download

description: A dataset containing 1501713 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen, Observation)",
 "Country is New Zealand",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Arthropoda",
 "Year 1930-2025"
 ]
}

 The dataset includes 1501713 records from 174 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027155-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.agda37
title: Occurrence Download

description: A dataset containing 2576 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Benin, Senegal, Burkina Faso, Togo, Côte d’Ivoire, Mali, Niger, Nigeria, Ghana, Guinea, Guinea-Bissau, Gambia, Cabo Verde, Liberia, Sierra Leone, Mauritania)",
 "OccurrenceStatus is Present",
 "TaxonKey is Strychnos spinosa",
 "Year 1980-2025"
 ]
}

 The dataset includes 2576 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027192-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c8uf5h
title: Occurrence Download

description: A dataset containing 36175 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Quaid-i-Azam University Herbarium"
 ]
}

 The dataset includes 36175 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027191-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15472/n2egc4
title: Cepario de Hongos Entomopatógenos

description: La información corresponde a colectas de especímenes de especies silvestres de la diversidad biológica con fines de investigación científica no comercial, bajo un permiso Marco de Recolección otorgado por el Ministerios de Ambiente y Desarrollo Sostenible.
El presente recurso contiene 7 registros de hongos entomopatógenos tomados en los años 2018, 2021 y 2025.