cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10853308
title: Double-negative B cells and DNASE1L3 colocalise with microbiota in gut-associated lymphoid tissue - IMC+RNAScope images

description: Intestinal homeostasis is maintained by the response of gut-associated lymphoid tissue to bacteria transported across the follicle associated epithelium into the subepithelial dome. The initial response to antigens and how bacteria are handled is incompletely understood. By iterative application of spatial transcriptomics and multiplexed single-cell technologies, we identify that the double negative 2 subset of B cells, previously associated with autoimmune diseases, is present in the subepithelial dome in health. We show that in this location double negative 2 B cells interact with dendritic cells co-expressing the lupus autoantigens DNASE1L3 and C1q and microbicides.  We observe that in humans, but not in mice, dendritic cells expressing DNASE1L3 are associated with sampled bacteria but not DNA derived from apoptotic cells. We propose that fundamental features of autoimmune diseases are microbiota-associated, interacting components of normal intestinal immunity.
DOI: 10.5281/zenodo.10853309
title: Double-negative B cells and DNASE1L3 colocalise with microbiota in gut-associated lymphoid tissue - IMC+RNAScope images

description: Intestinal homeostasis is maintained by the response of gut-associated lymphoid tissue to bacteria transported across the follicle associated epithelium into the subepithelial dome. The initial response to antigens and how bacteria are handled is incompletely understood. By iterative application of spatial transcriptomics and multiplexed single-cell technologies, we identify that the double negative 2 subset of B cells, previously associated with autoimmune diseases, is present in the subepithelial dome in health. We show that in this location double negative 2 B cells interact with dendritic cells co-expressing the lupus autoantigens DNASE1L3 and C1q and microbicides.  We observe that in humans, but not in mice, dendritic cells expressing DNASE1L3 are associated with sampled bacteria but not DNA derived from apoptotic cells. We propose that fundamental features of autoimmune diseases are microbiota-associated, interacting components of normal intestinal immunity.
DOI: 10.15468/dl.gqm3k2
title: Occurrence Download

description: A dataset containing 212 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thymelaea lythroides Barratte & Murb."
 ]
}

 The dataset includes 212 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126899-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xj2znn
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trigonella ionantha Rech.f."
 ]
}

 The dataset includes 10 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126900-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tb7grx
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tylostigma herminioides Schltr."
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126901-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9enrqc
title: Occurrence Download

description: A dataset containing 26132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Capreolus capreolus (Linnaeus, 1758)",
 "Year is 2023",
 "Country is Netherlands"
 ]
}

 The dataset includes 26132 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126898-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qqyysr
title: Occurrence Download

description: A dataset containing 625 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Galium verum L.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 625 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126902-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wcbgzt
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trematolobelia wimmeri O.Deg. & I.Deg."
 ]
}

 The dataset includes 16 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126903-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2zt4g9
title: Occurrence Download

description: A dataset containing 907 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vaccinium calycinum Sm."
 ]
}

 The dataset includes 907 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126904-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11002995
title: Land and atmospheric drivers of the 2023 flood in India
DOI: 10.15468/dl.gdsp5f
title: Occurrence Download

description: A dataset containing 261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Elytrigia repens (L.) Nevski",
 "MediaType is Image",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 261 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0408041-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.apy7bj
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Physostegia micrantha Lundell"
 ]
}

 The dataset includes 11 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078797-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w6r9fu
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-87.02429 -23.01282,-56.97571 -23.01282,-56.97571 -10.98718,-87.02429 -10.98718,-87.02429 -23.01282))",
 "HasCoordinate is true",
 "TaxonKey is Telmatobius arequipensis Vellard, 1955",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 76 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075942-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.deh3qd
title: Occurrence Download

description: A dataset containing 2834 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epipactis atrorubens (Hoffm.) Besser",
 "MediaType is Image",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 2834 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0408061-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.znh9ux
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudognaphalium caeruleocanum (Steyerm.) Anderb."
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0096641-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vuha9q
title: Occurrence Download

description: A dataset containing 219060 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Thailand",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 219060 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0205730-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4xu3dq
title: Occurrence Download

description: A dataset containing 985 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Epilobium palustre L.",
 "MediaType is Image",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 985 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0408060-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kgjkbj
title: Occurrence Download

description: A dataset containing 707 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Caracterización biológica para la zona propuesta de ampliación del DRMI Pance en Jamundí (San Vicente)"
 ]
}

 The dataset includes 707 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078813-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hhesqv
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aotus infulatus (Kuhl, 1820)"
 ]
}

 The dataset includes 59 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002442-190307172214381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6u947y
title: Occurrence Download

description: A dataset containing 209828 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Czechia",
 "GadmGid is CZE",
 "InstitutionCode is iNaturalist"
 ]
}

 The dataset includes 209828 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001487-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tevvu7
title: Occurrence Download

description: A dataset containing 855 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Atrichornis clamosus",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 855 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062741-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r2zspr
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Griselinia scandens (Ruiz & Pav.) Taub."
 ]
}

 The dataset includes 83 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002442-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yykzb7
title: Occurrence Download

description: A dataset containing 503 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Vachellia tortilis (Forssk.) Galasso & Banfi",
 "HasCoordinate is true"
 ]
}

 The dataset includes 503 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008261-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.whn9p8
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "Country is Netherlands",
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Lagopus lagopus (Linnaeus, 1758), Lyrurus tetrix (Linnaeus, 1758))",
 "Year 2000-2023"
 ]
}

 The dataset includes 30 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038122-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10792338
title: Supplementary materials (first version)

description: See the publication for details
DOI: 10.15468/dl.2d45y5
title: Occurrence Download

description: A dataset containing 251 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Benin",
 "TaxonKey is Acroceras zizanioides (Kunth) Dandy"
 ]
}

 The dataset includes 251 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044651-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sbjwgd
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saguinus nigricollis nigricollis"
 ]
}

 The dataset includes 26 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008276-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qekqda
title: Occurrence Download

description: A dataset containing 513 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((-64.05707 47.13262,-64.6001 46.69926,-64.03032 46.23648,-63.11278 45.95293,-62.39319 45.88605,-61.81538 46.48526,-64.05707 47.13262))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Dolichonyx oryzivorus (Linnaeus, 1758)"
 ]
}

 The dataset includes 513 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008820-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pp2ejc
title: Occurrence Download

description: A dataset containing 233476 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves, Mammalia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-87.0166667 33.1833333,-86.5916667 33.1833333,-86.5916667 33.7083333,-87.0166667 33.7083333,-87.0166667 33.1833333))"
 ]
}

 The dataset includes 233476 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052823-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y9rzm4
title: Occurrence Download

description: A dataset containing 357 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-78.36182 -47.63916,-76.0669 -53.93799,-67.66113 -57.48535,-56.48682 -53.10791,-47.75208 -26.48499,-47.88117 -25.11597,-49.37653 -24.21051,-49.5221 -22.99378,-51.0846 -22.70081,-53.39173 -22.40784,-54.27063 -23.86047,-55.11963 -23.66455,-55.44068 -22.03735,-57.78443 -21.9397,-57.61353 -20.81665,-58.04932 -19.51416,-60.1001 -18.78174,-61.90003 -19.50256,-62.81372 -21.30493,-64.49829 -22.18384,-66.52466 -21.67114,-67.35474 -22.55005,-67.88147 -21.67542,-67.96692 -19.99085,-69.11255 -17.52075,-69.91455 -17.41455,-70.45166 -18.39111,-78.36182 -47.63916))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Gochnatia Kunth"
 ]
}

 The dataset includes 357 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0408033-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.agds7e
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Atronanus fuliginosus",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 58 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062746-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hjjvdt
title: Occurrence Download

description: A dataset containing 18212 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Hedysarum L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 18212 records from 243 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075945-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.75ffxn
title: Occurrence Download

description: A dataset containing 4574 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Vallisneria spiralis L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4574 records from 142 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008262-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cfbu3g
title: Occurrence Download

description: A dataset containing 2549 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Larus canus Linnaeus, 1758",
 "Year is greater than 2013",
 "Geometry MULTIPOLYGON (((19.51 47.46,19.51 36.21,6.41 36.21,6.41 47.46,19.51 47.46)))"
 ]
}

 The dataset includes 2549 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038130-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3rb7fh
title: Occurrence Download

description: A dataset containing 11546 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Leucaena leucocephala (Lam.) de Wit",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 11546 records from 355 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075967-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9y7tf9
title: Occurrence Download

description: A dataset containing 119 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mico humeralifer (É.Geoffroy Saint-Hilaire, 1812)"
 ]
}

 The dataset includes 119 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008269-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mz883h
title: Occurrence Download

description: A dataset containing 2818 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudofumaria alba (Mill.) Lidén"
 ]
}

 The dataset includes 2818 records from 171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0096618-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9eey9v
title: Occurrence Download

description: A dataset containing 3234 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Aeschynomene americana L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3234 records from 195 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022101-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nbjx3b
title: Occurrence Download

description: A dataset containing 374 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mico argentatus (Linnaeus, 1771)"
 ]
}

 The dataset includes 374 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008264-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7j6nqq
title: Occurrence Download

description: A dataset containing 12589 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Attila rufus",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 12589 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062756-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.