cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.12763/eyvx3p/y2i6ax
title: 661_2_NL_C_H_114_072.tab

description: :unav
DOI: 10.12763/eyvx3p/pwcky5
title: 1145_3_NL_Er_H_181_117.tab

description: :unav
DOI: 10.7483/opendata.cms.w83c.wyjq
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-15_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.12763/eyvx3p/bu4qmm
title: 617_1_Ref_V_110_068.tab

description: :unav
DOI: 10.12763/eyvx3p/rc5x9j
title: 949_3_NL_Kr_H_155_096.tab

description: :unav
DOI: 10.12763/eyvx3p/r5wmiu
title: 1296_1_NL_Cl_H_194_129.tab

description: :unav
DOI: 10.12763/eyvx3p/xlwiy3
title: 339_1_NL_Gr_H_69_040.tab

description: :unav
DOI: 10.7483/opendata.cms.o104.ct84
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-15_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.12763/eyvx3p/8kjzg5
title: 583_1_Ref_V_107_065.tab

description: :unav
DOI: 10.12763/eyvx3p/ooxo0g
title: 110_068.json

description: :unav
DOI: 10.6084/m9.figshare.26946523
title: Supporting data for:"Integrated gene expression and alternative splicing analysis in human and mouse models of Rett Syndrome."

description: The folder "Homo_sapiens" contains 8 subfolders. Each of them is an individual input Bioproject downloaded from SRA and reanalized with the same transcriptomic pipeline in order to compute:1) Differentially Alternative spliced Genes (DAS) in .tsv format;2) Differentially expressed genes in csv format;3) Gene ontology analysis over DEGs results. When the analysis has produced statistically significant results for Gene Enrichment Ontology analysis, three .csv files have been added to each folder, one for BP=Biological Process results, one for CC=Cellular Component results and one for MF=Molecular Functions results.When a Bioprojects appears more than once, it means that DEGs have been computed over diffferent varibles (e.g. Rtt vs. wt) or treated as indipendent studies when multiple source materials are present. To distinguish the studies an "_<i>0", "_</i><i>1", "</i>_2" progressive number has been added to the folder names (e.g. in PRJNA509687_0 the samples under study were iPSC derived neural cortical neurons RTT vs. Wt while in PRJNA509687_1 the samples were derived from iPSC derived neural progenitors RTT vs. Wt). To facilitate the folder navigation, a file named "parameters" has been added to each folder.4) DESeq2 inputs divided in:gene count matrices in csv formatassociated phenodata.csvThe same logic is applied to the main folder "Mus_musculus",which contains 13 subfolders with DAS and DEG results
DOI: 10.6084/m9.figshare.26946523.v1
title: Supporting data for:"Integrated gene expression and alternative splicing analysis in human and mouse models of Rett Syndrome."

description: The folder "Homo_sapiens" contains 8 subfolders. Each of them is an individual input Bioproject downloaded from SRA and reanalized with the same transcriptomic pipeline in order to compute:1) Differentially Alternative spliced Genes (DAS) in .tsv format;2) Differentially expressed genes in csv format;3) Gene ontology analysis over DEGs results. When the analysis has produced statistically significant results for Gene Enrichment Ontology analysis, three .csv files have been added to each folder, one for BP=Biological Process results, one for CC=Cellular Component results and one for MF=Molecular Functions results.When a Bioprojects appears more than once, it means that DEGs have been computed over diffferent varibles (e.g. Rtt vs. wt) or treated as indipendent studies when multiple source materials are present. To distinguish the studies an "_<i>0", "_</i><i>1", "</i>_2" progressive number has been added to the folder names (e.g. in PRJNA509687_0 the samples under study were iPSC derived neural cortical neurons RTT vs. Wt while in PRJNA509687_1 the samples were derived from iPSC derived neural progenitors RTT vs. Wt). To facilitate the folder navigation, a file named "parameters" has been added to each folder.4) DESeq2 inputs divided in:gene count matrices in csv formatassociated phenodata.csvThe same logic is applied to the main folder "Mus_musculus",which contains 13 subfolders with DAS and DEG results
DOI: 10.12763/eyvx3p/olz4n6
title: 214_3_L_Er_nBCC_56_030.tab

description: :unav
DOI: 10.7483/opendata.cms.dka8.0ypb
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-20_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v1/MINIAODSIM
DOI: 10.12763/eyvx3p/8cht6u
title: 183_1_L_Fr_AK1_54_028.tab

description: :unav
DOI: 10.12763/eyvx3p/tgjoin
title: 451_3_Ref_T_92_053.tab

description: :unav
DOI: 10.12763/eyvx3p/gbdgsu
title: 1190_2_NL_Kl_H_184_120.tab

description: :unav
DOI: 10.12763/eyvx3p/wuwrvm
title: 230_2_Ref_T_61_032.tab

description: :unav
DOI: 10.12763/eyvx3p/q3zzay
title: 97_057.json

description: :unav
DOI: 10.12763/eyvx3p/sze4tg
title: 922_2_L_F_isSCC_153_094.tab

description: :unav
DOI: 10.7483/opendata.cms.ud2n.48qi
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-20_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.12763/eyvx3p/wrtwnd
title: 1171_3_NL_Cb_H_183_119.tab

description: :unav
DOI: 10.12763/eyvx3p/yxjvdk
title: 73_1_L_A_invSCC_30_017.tab

description: :unav
DOI: 10.12763/eyvx3p/zkoiqv
title: 172_1_L_M_supBCC_54_028.tab

description: :unav
DOI: 10.12763/eyvx3p/uxvx1d
title: 546_3_Ref_T_102_061.tab

description: :unav
DOI: 10.15468/dl.mg379r
title: Occurrence Download

description: A dataset containing 2138 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is one of (United States of America, Canada)",
 "TaxonKey is Petromyzon marinus Linnaeus, 1758"
 ]
}

 The dataset includes 2138 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066816-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7483/opendata.cms.g3zc.wvt1
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-25_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.12763/eyvx3p/2m1lkk
title: 46_026.json

description: :unav
DOI: 10.12763/eyvx3p/cmbug4
title: 236_1_L_Ct_AK2_61_032.tab

description: :unav
DOI: 10.12763/eyvx3p/f8uv0r
title: 338_3_NL_Gr_H_69_040.tab

description: :unav
DOI: 10.12763/eyvx3p/ojeekj
title: 178_3_L_CCr_mdISCC_54_028.tab

description: :unav
DOI: 10.12763/eyvx3p/olvfyy
title: 177_1_Cal_STD_54_028.tab

description: :unav
DOI: 10.7483/opendata.cms.mdon.z2ep
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-25_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.12763/eyvx3p/4jp4pf
title: 993_2_Ref_T_160_101.tab

description: :unav
DOI: 10.12763/eyvx3p/pxlvcq
title: 1369_1_L_Fl_AK1_201_135.tab

description: :unav
DOI: 10.12763/eyvx3p/zlwxgn
title: 1025_2_L_A_CC_163_104.tab

description: :unav
DOI: 10.12763/eyvx3p/gqpthc
title: 269_1_NL_ZAl_H_63_034.tab

description: :unav
DOI: 10.12763/eyvx3p/vdls7q
title: 1463_1_NL_Fl_H_213_141.tab

description: :unav
DOI: 10.7483/opendata.cms.ydyn.f3go
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-2_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.12763/eyvx3p/dk9kja
title: 1093_1_NL_B_H_171_110.tab

description: :unav
DOI: 10.12763/eyvx3p/4zq9yh
title: 1484_1_L_Ar_AK1_214_142.tab

description: :unav
DOI: 10.12763/eyvx3p/p5beza
title: 974_3_Ref_V_158_099.tab

description: :unav
DOI: 10.12763/eyvx3p/xz9ns0
title: 563_1_Cal_STD_103_062.tab

description: :unav
DOI: 10.7483/opendata.cms.664w.2ltw
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-2_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.12763/eyvx3p/teygso
title: 307_2_Ref_V_66_037.tab

description: :unav
DOI: 10.12763/eyvx3p/dcervg
title: 905_3_NL_Er_H_143_092.tab

description: :unav
DOI: 10.12763/eyvx3p/wzb0fu
title: 831_1_Ref_V_133_086.tab

description: :unav
DOI: 10.12763/eyvx3p/zmga7u
title: 1255_1_Ref_T_192_127.tab

description: :unav
DOI: 10.12763/eyvx3p/0y8jx3
title: 664_3_Ref_V_115_073.tab

description: :unav
DOI: 10.12763/eyvx3p/deqvcx
title: 1285_3_L_Cr_mdISCC_193_128.tab

description: :unav
DOI: 10.7483/opendata.cms.enek.0bgw
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-30_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.12763/eyvx3p/npul0z
title: 1336_3_Ref_T_199_133.tab

description: :unav
DOI: 10.12763/eyvx3p/743ajy
title: 1444_1_Ref_V_208_140.tab

description: :unav
DOI: 10.12763/eyvx3p/u8uvx2
title: 673_2_Cal_STD_115_073.tab

description: :unav
DOI: 10.12763/eyvx3p/0f2hxz
title: 1133_3_L_Cr_ICC_179_116.tab

description: :unav
DOI: 10.7483/opendata.cms.u8r5.tg7w
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-30_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.12763/eyvx3p/lx5mxv
title: 557_1_Ref_T_103_062.tab

description: :unav
DOI: 10.12763/eyvx3p/7g49kz
title: 931_2_L_Co_AK1_153_094.tab

description: :unav
DOI: 10.12763/eyvx3p/jikxej
title: 243_3_JL_Cb_AK1_61_032.tab

description: :unav
DOI: 10.12763/eyvx3p/bk3r2y
title: 1002_1_NL_M_H_160_101.tab

description: :unav
DOI: 10.12763/eyvx3p/bxkc47
title: 646_3_Ref_T_113_071.tab

description: :unav
DOI: 10.12763/eyvx3p/kum26x
title: 1127_3_NL_Dl_H_177_114.tab

description: :unav
DOI: 10.15468/dl.q9mmz7
title: Occurrence Download

description: A dataset containing 2768 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rosa chinensis Jacq."
 ]
}

 The dataset includes 2768 records from 218 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066815-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7483/opendata.cms.de2z.ctdo
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-40_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v1/MINIAODSIM
DOI: 10.12763/eyvx3p/9zbx23
title: 1172_3_L_Ct_AK1_183_119.tab

description: :unav
DOI: 10.12763/eyvx3p/ey3jjw
title: 334_1_Ref_V_69_040.tab

description: :unav
DOI: 10.12763/eyvx3p/rhbhes
title: 273_1_Ref_T_64_035.tab

description: :unav
DOI: 10.7483/opendata.cms.z5i7.eamb
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-40_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.12763/eyvx3p/jmsp1g
title: 1181_3_NL_Br_H_184_120.tab

description: :unav
DOI: 10.12763/eyvx3p/qcgbl0
title: 236_3_L_Ct_AK2_61_032.tab

description: :unav
DOI: 10.12763/eyvx3p/ajm30o
title: 711_3_L_El_nBCC_118_076.tab

description: :unav
DOI: 10.12763/eyvx3p/gskecp
title: 310_1_NL_Cl_H_66_037.tab

description: :unav
DOI: 10.12763/eyvx3p/jaldov
title: 1254_3_Ref_V_192_127.tab

description: :unav
DOI: 10.7483/opendata.cms.fwpi.gwck
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-50_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v1/MINIAODSIM
DOI: 10.12763/eyvx3p/p8axkr
title: 1476_2_Cal_STD_213_141.tab

description: :unav
DOI: 10.12763/eyvx3p/st0p8a
title: 70_041.json

description: :unav
DOI: 10.12763/eyvx3p/59i5nk
title: 605_3_L_Jr_iBCC_109_067.tab

description: :unav
DOI: 10.12763/eyvx3p/xxjzid
title: 618_2_Ref_T_110_068.tab

description: :unav
DOI: 10.12763/eyvx3p/0ff9tc
title: 505_2_NL_Cl_H_97_057.tab

description: :unav
DOI: 10.7483/opendata.cms.2yde.mstc
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-50_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.12763/eyvx3p/aiidl6
title: 1389_1_Ref_V_202_136.tab

description: :unav
DOI: 10.12763/eyvx3p/cazgun
title: 700_1_JL_Ub_isSCC_117_075.tab

description: :unav
DOI: 10.12763/eyvx3p/cfz8pn
title: 102_061.json

description: :unav
DOI: 10.12763/eyvx3p/0oigf5
title: 862_1_NL_Br_H_136_089.tab

description: :unav
DOI: 10.7483/opendata.cms.y443.9zat
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-5_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.12763/eyvx3p/swotzk
title: 732_1_Ref_T_120_077.tab

description: :unav
DOI: 10.15468/dl.7kt9q8
title: Occurrence Download

description: A dataset containing 1358 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Erebia alberganus von Prunner, 1798"
 ]
}

 The dataset includes 1358 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066819-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.12763/eyvx3p/dnxcsb
title: 1029_1_L_Kl_AK1_163_104.tab

description: :unav
DOI: 10.12763/eyvx3p/lb3ytq
title: 117_1_NL_El_H_38_022.tab

description: :unav
DOI: 10.12763/eyvx3p/ziknuz
title: 470_3_L_Rl_AK1_93_054.tab

description: :unav
DOI: 10.7483/opendata.cms.xqdj.4gp2
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-5_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.12763/eyvx3p/daogy7
title: 456_3_L_Fl_wdISCC_92_053.tab

description: :unav
DOI: 10.12763/eyvx3p/kodggu
title: 1008_2_L_Cr_H_161_102.tab

description: :unav
DOI: 10.12763/eyvx3p/8qupzo
title: 817_2_Ref_V_131_085.tab

description: :unav
DOI: 10.15468/dl.mz5h78
title: Occurrence Download

description: A dataset containing 61929 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Culex pipiens Linnaeus, 1758",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2010"
 ]
}

 The dataset includes 61929 records from 161 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066814-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.12763/eyvx3p/zwln4w
title: 905_2_NL_Er_H_143_092.tab

description: :unav
DOI: 10.12763/eyvx3p/6ybtxs
title: 1008_1_L_Cr_H_161_102.tab

description: :unav
DOI: 10.7483/opendata.cms.7hdi.rjrs
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-60_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v2/MINIAODSIM
DOI: 10.12763/eyvx3p/cagpva
title: 59_2_Ref_V_29_016.tab

description: :unav
DOI: 10.12763/eyvx3p/mk5kqa
title: 692_1_JL_Ut_wdISCC_117_075.tab

description: :unav
DOI: 10.12763/eyvx3p/jppjfx
title: 799_3_L_Er_ICC_128_083.tab

description: :unav
DOI: 10.12763/eyvx3p/jcdvdj
title: 1293_2_L_Cl_AK1_194_129.tab

description: :unav
DOI: 10.12763/eyvx3p/xagd0j
title: 1105_1_Ref_V_174_112.tab

description: :unav
DOI: 10.7483/opendata.cms.718g.18h9
title: /MSSMGluGluToBBAToMuMu_MA-400_Tanb-60_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.12763/eyvx3p/o68v6x
title: 141_2_L_Bl_ELSE_43_025.tab

description: :unav
DOI: 10.12763/eyvx3p/bs5yq1
title: 552_3_L_Bl_supBCC_102_061.tab

description: :unav
DOI: 10.12763/eyvx3p/dc1adi
title: 198_2_NL_CCr_H_55_029.tab

description: :unav
DOI: 10.12763/eyvx3p/2sb0cs
title: 218_3_NL_Er_H_56_030.tab

description: :unav
DOI: 10.7483/opendata.cms.pxd5.e2ty
title: /MSSMGluGluToBBAToMuMu_MA-450_Tanb-10_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v1/MINIAODSIM
DOI: 10.12763/eyvx3p/75xkif
title: 1155_3_Ref_T_182_118.tab

description: :unav
DOI: 10.12763/eyvx3p/zbsigc
title: 1060_1_L_CCl_mdISCC_166_107.tab

description: :unav
DOI: 10.15468/dl.sxjxtp
title: Occurrence Download

description: A dataset containing 131 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "GadmGid is USA.18_1",
 "TaxonKey is Petromyzontiformes"
 ]
}

 The dataset includes 131 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066818-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.12763/eyvx3p/vfkb7q
title: 3_1_L_Jl_nBCC_20_011.tab

description: :unav
DOI: 10.12763/eyvx3p/saotfl
title: 41_2_Ref_T_26_015.tab

description: :unav
DOI: 10.7483/opendata.cms.ywxt.6zxw
title: /MSSMGluGluToBBAToMuMu_MA-450_Tanb-10_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16NanoAODv9-106X_mcRun2_asymptotic_v17-v1/NANOAODSIM
DOI: 10.12763/eyvx3p/9ctzpi
title: 363_3_NL_El_H_76_043.tab

description: :unav
DOI: 10.12763/eyvx3p/fbyjvb
title: 154_095.json

description: :unav
DOI: 10.12763/eyvx3p/6ocnor
title: 1229_1_Ref_V_189_124.tab

description: :unav
DOI: 10.12763/eyvx3p/0tpasc
title: 1067_3_L_CCr_TR_169_108.tab

description: :unav
DOI: 10.12763/eyvx3p/s4itrp
title: 896_2_NL_A_H_141_091.tab

description: :unav
DOI: 10.12763/eyvx3p/xfcn0v
title: 273_3_Ref_T_64_035.tab

description: :unav
DOI: 10.7483/opendata.cms.b4zh.jdo4
title: /MSSMGluGluToBBAToMuMu_MA-450_Tanb-15_TuneCP5_13TeV-powheg-pythia8/RunIISummer20UL16MiniAODv2-106X_mcRun2_asymptotic_v17-v1/MINIAODSIM
DOI: 10.12763/eyvx3p/15kaf5
title: 632_2_NL_Fr_H_111_069.tab

description: :unav
DOI: 10.12763/eyvx3p/cjjuzg
title: 1075_2_Ref_T_170_109.tab

description: :unav
DOI: 10.12763/eyvx3p/rqexw2
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