cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21922518.v1
title: Supplementary Material for: Brief Report: Protective or Risk Factor? Aftermath Effects of Perceived Social Support on Embitterment during the COVID-19 Pandemic

description: There are indications for a raise in embitterment during the COVID-19 pandemic. As embitterment is related to felt social exclusion, pessimism, and a proneness toward COVID-19-related conspiracy beliefs, embitterment may be a key factor to consider in the current pandemic. However, perceived social support (PSS), which is associated with hope during the COVID-19 pandemic could serve as an important resilience factor for bitterness. We therefore investigated the effects of PSS on embitterment in aftermath of the second wave of the COVID-19 pandemic. 52 individuals participated in our follow-up online study in October 2020 (T1) and May 2021 (T2). Embitterment (measured with the Berne Embitterment Inventory) and PSS were repeatedly assessed at T1 and T2. A double moderation analysis was conducted, using the PROCESS macro to examine the effects of embitterment, PSS, and age on embitterment 6 months later. The results suggest that the prediction of embitterment at T2 by embitterment at T1 was altered by changes in PSS. Here, in particular participants with high embitterment at T1 and a gain in PSS had higher embitterment scores at T2, whereas participants with low embitterment were found to have lower embitterment scores. This interaction effect was further influenced by the age of the participants, where the effects were more pronounced among middle-aged participants than younger participants. As embittered individuals seem to grow in bitterness with a gain in PSS, support is found for the notion that embittered individuals seeking allies supporting their mindset.
DOI: 10.6084/m9.figshare.29019191.v1
title: Datasets of amplicon sequencing for global CNP manuscript

description: Imbalanced soil elemental cycles under climate change affects microbial composition and ecosystem functions such as suppliesof nutrients and energy. We largely unknown the adaptive strategiesof soil microorganisms under such circumstances. Here we investigate the relationships between contents of soil carbon, nitrogen, and phosphorus with the microbiome from 200 terrestrial ecosystems at a global scale. Relatively soil P deficiency was aggravated in wetter regionswith higher productivity, which inhibits microbial anabolic processes involved in growth and reproduce. To survive, soil microbiome enhances their catabolism to acquire energy from degradation of recalcitrant carbon, and subsequently invests for ecoenzyme syntheses in acquiring N and P. Our findings unravel microbial metabolism strategies and the environmental impacts in response to soil elemental imbalances.
DOI: 10.17632/tcy7x24vbx
title: N_GCA_SI_Tables

description: Tables SA, SB, SC and SD.
DOI: 10.17632/x4zmdxzpnc
title: Data Set for "Holocene climate modulates mud supply, transport, and sedimentation on the East China Sea shelf"

description: The data includes six updated chronological frames of sediment cores (ECMZ, MZ02, MD06-3040, EC2005, MD06-3042, and MZ01) using Clam (version 2.2) program via R software, heavy minerals in core ECMZ, and Holocene variations in mass accumulation rate (MAR) of mud on the East China Sea shelf in the western Pacific.
DOI: 10.6084/m9.figshare.13006622.v1
title: Data set 3 - Forty-Two reports and configuration files (260 transcriptomes)

description: Forty-Two's files: command-line yaml generating script (.sh), configuration file (.yaml), queries (.txt), reference organisms (.tsv) and external contamination reports (taxonomic affiliations and summary; .tsv).
DOI: 10.6084/m9.figshare.21621222.v5
title: Detection and classification of bottlenose dolphin’s (Tursiops truncatus, Montagu, 1821) vocalizations in the central-northern Adriatic Sea

description: This dataset is part of a collection and contains the results of dolphins’ vocalizations detection and classification. In details: <strong>whistles.txt</strong> includes useful information on 303 whistles visually detected from the whole recording, where: the first column reports the whistle starting time offset the second column reports the whistle end-time offset the third column contains the classification (W for single whistle, MW for multiple whistles) and the relative quality grade of the whistle. The whistle quality increases with increasing grade (from 1 to 3). <br> <strong>clicks.txt</strong> contains a list of the classified echolocalization emission events detected by an algorithm specifically developed for this aim, where: the first column reports the starting time offset the second column reports the end-time offset the third column contains the mean ICI bin in classes of 5ms <br> <br> These txt files can be directly used with Audacity software to mark the vocalization contained in the raw wave file stored in DATA 1 as described in this tutorial. <br> <strong>results.xlsx</strong> reports the results of an algorithm-based analysis of 99 acoustic segments, achieved splitting the raw audio signal in 98 one-minute-length parts and one 20-second-lenght final part. This analysis was performed in order to detect and classify high-frequency dolphin’s emissions. The csv file includes the following information for each acoustic segment: the segment number; the total number of considered peaks; the number of detected click trains; the minimum ICI value of the detected trains; the maximum ICI value of the detected trains; the average ICI value of the detected trains; the number of observed whistles, if present in the segment; the presence in the relative segment of multiple whistles (Yes/No). <br>
DOI: 10.6084/m9.figshare.27311535.v1
title: Data--The Effect of Interactive Video Narratives on Students’ Learning Engagement in the Gamification Context

description: In recent years, social media platforms have introduced interactive videos and have gradually been used in teaching. As the core element of interactive videos, interactive narratives combined with gamification elements provide users with a rich learning environment. The researchers focused on testing the effects of interactive narratives on social media users’ learning engagement under the moderation of gamification in this study. The study quantitatively surveyed 322 interactive video users and obtained research results through the Partial Least Squares Structural Equation Modelling (PLS-SEM). Interactive narrative influences users’ learning engagement through the full mediation of flow experience and subjective video quality assessment, which shows the importance of flow experience and subjective video quality assessment provided by interactive videos to learners. In addition, gamification negatively moderates the relationship between interactive narrative and flow experience, which means that excessive gamification will affect learners’ flow experience of interactive videos. The study provides an operational practical solution for adding engaging interactive narratives into social media application development. More user feedback elicited by interactive video narratives deserves to be studied in future research.
DOI: 10.17632/8kvs86k6c4
title: Sustainable Housing Assessment Tool (SHAT): An Indicator Set

description: This data file is related to the manuscript "How to measure sustainable housing: A proposal for an indicator-based assessment tool". The data file presents an original indicator set of SHAT (Sustainable Housing Tool Assessment) operationalizing the Geneva UN Charter on Sustainable Housing. It consists of 55 proposed indicators, where 11 of them are extended by, in total, 53 dashboard single indicators. The data include proposed indicators' names, description, units, information about sources, initial phenomenons derived from the Geneva Geneva UN Charter on Sustainable Housing and categorization of proposed indicators (sustainability dimensions, sustainable housing components and types of indicators).
DOI: 10.17632/s84y34mzcs
title: Validation of automatic detection of gait phases

description: This dataset contains a back axis video screen recording of DIERS formetric III 4D™, DICAM v3.7Beta analyzing system and the exported corresponding raw data in an Excel sheet.
Encoding of gait phases was as follows: We started to measure a gait cycle (encoded with 1 in the exported output) with the first full Initial Contact of the right foot which is also the start of the encoding for the stance phase right (1). Hence, the start of the next gait cycle is the next IC of the right leg (2) and so forth (3 …). At the first right IC the left leg is supposed to be in Terminal Stance, therefore still on the ground but without having had its first IC. This and only this context is encoded by 0, the full stance period after IC left is analogously encoded by 1. Both legs swing phases are marked with - in the data export. Along their assigned time stamp the respective gait phases (stance and swing phases left/right; full gait cycles) were encoded timely synchronized into the raw data of the spinal model.
Validation of automatic detection of gait phases was done by viewing video recordings of the back and lateral axis cameras in DICAM in which single frames of the video recordings (also containing the same time stamp / frame as the spinal model data output) were checked for face valid results compared to the automated detection and its encoding into the spinal model data. A data sample Excel sheet of one single measure at 5 km/h including one spinal parameter (Rotation Pelvis) can be used as a reference for this process. In all 3 gait cycles the visually identifiable moment in time of Initial Contact was in the range of ± 3 Frames / 3/60 Hz compared to frame number in the exported raw data.
DOI: 10.6084/m9.figshare.12859889.v1
title: Medicago sativa.genomic.fa.zip

description: A chromosome-scale genome assembly of a diploid alfalfa, the progenitor of autotetraploid alfalfa
DOI: 10.6084/m9.figshare.13353458.v4
title: test data for ParaQA

description: test data for ParaQA
DOI: 10.6084/m9.figshare.15032136.v1
title: Data_The disruption of a keystone interaction erodes pollination and seed dispersal networks

description: Data to build the pollination and seed dispersal networks
DOI: 10.25403/upresearchdata.24558934.v1
title: Ethical leadership, service delivery and good governance in eThekwini Municipality

description: This research study employed a qualitative research approach, using semi-structured interviews with employees in the Finance Department and Supply Chain Department in eThekwini Municipality. The study used non-probability sampling to get more insight regarding the views and perceptions of the respondents through the use of ATLAS.ti software, to analyse the findings. Deductive and inductive coding of the qualitative data was performed using ATLAS.ti 2022 for Windows. This programme was used to extract verbatim quotations from the qualitative data collected and construct data visualisations. Thematic analysis of the qualitative data from semi-structured interviews was used. Firstly, individual transcript responses were coded based on the themes identified by the researcher through the study questions. The uploaded files contain an analyzed data and interview transcripts.
DOI: 10.6084/m9.figshare.18338603.v1
title: Dynamic Mechanism of Peptide Agonist Binding in CXCR4 Chemokine Receptor

description: Using the recently published computational model of the CXCR4-CXCL12 complex(Ngo et al., 2020), we investigate binding mechanisms of the super and partial peptide agonists (ASLW and RSVM) in the CXCR4 through novel Pep-GaMD simulations(Wang and Miao, 2020).
DOI: 10.6084/m9.figshare.23553114.v3
title: The OREGANO knowledge graph for computational drug repurposing

description: The files here are data files from the OREGANO project, which consists of building a holistic knowledge graph on drugs, including natural compounds. Here is the list of files:<br>- OREGANO_V2.tsv : The triplet file used for link prediction. 3 columns : Subjet ; Predicate ; Object- oreganov2.1_metadata_complet.ttl : The OREGANO knowledge graph in turtle format with the names and cross-references of the various integrated entities.<br>The following files contain the cross-references of OREGANO entities according to their type. They are all organised as follows: the external sources are the titles of the columns and each line begins with the identifier of the entity in OREGANO :- TARGET.tsv: Cross-reference table of the 22,096 targets.<br>- PHENOTYPES.tsv: Cross-reference table of the 11,605 phenotypes.<br>- DISEASES.tsv: Cross-reference table of the 18,333 diseases.<br>- PATHWAYS.tsv: Cross-reference table of the 2,129 pathways.<br>- GENES.tsv: Cross-reference table of the 35,794 genes.<br>- COMPOUND.tsv: Cross-reference table of the 90,868 compounds.<br>- INDICATIONS.tsv: Cross-reference table of the 2,714 indications.<br>- SIDE_EFFECT.tsv: Cross-reference table of the 6,060 side-effects.<br>- ACTIVITY.tsv: Names of the 78 activities.<br>- EFFECT.tsv: Names of the 171 effects.The OREGANO knowledge graph is composed of 11 types of nodes and 19 types of links. The current version of the graph contains 88,937 nodes and 824,231 links.A SPARQL endpoint has been provided to enable users to retrieve and explore the knowledge graph at OREGANO SPARQL endpoint .<br>The integration files and the knowledge graph are available on the GitHub of the OREGANO project in the Integration folder: Gitub repository .
DOI: 10.6084/m9.figshare.27325422.v2
title: asthenospermia transcription sequence

description: We aim to address the reviewer’s concerns regarding the novelty of our dataset and the lack of detailed data quality assessment and analysis. During spermatocyte development, a significant amount of cytoplasmic material is eliminated. As a result, mature and functional sperm cells are expected to contain substantially less RNA compared to somatic cells. Consequently, standard RNA-seq quality metrics, typically applied to somatic tissues, are inappropriate for sperm transcriptome analysis. This critical aspect has been overlooked in previous studies, and existing datasets predominantly represent samples with abundant RNA, likely from immature or defective sperm cells. Our dataset uniquely encompasses both samples meeting and failing conventional RNA-seq quality standards, providing a comprehensive view of sperm RNA content. This enables us to investigate the role of RNA in sperm generation and to develop novel RNA quality metrics tailored to sperm analysis. Furthermore, our data will facilitate the identification and characterization of residual RNA in mature sperm cells, and its potential impact on offspring phenotypes.
DOI: 10.6084/m9.figshare.28625153.v1
title: Online data related to manuscript "A minimally invasive thrombotic model to study stroke in awake mice, Marks et al."

description: The data support the development and characterization of an experimental stroke model in mice using thrombin-coated magnetic nanoparticles.
DOI: 10.6084/m9.figshare.28829459.v3
title: Genomic Analysis of SARS-CoV-2 GRA Lineage: Identification of Novel Mutation n.28271delA in ORF8 and N Gene

description: This dataset provides supplementary materials related to the identification and analysis of novel mutations in the ORF8 gene of SARS-CoV-2. It includes raw sequencing reads and annotated variants from the SARS-CoV-2 GRA lineage isolate NY-PRL-250415_83F01, collected from a patient in New York, USA, on April 7, 2025. Key findings include the discovery of a novel intergenic deletion (n.28271delA) between the ORF8 and N genes, as well as additional mutations in ORF1ab and other genomic regions. This data has been submitted to GenBank under accession number PV548865 and supports my upcoming preprint titled <i>'Genomic Analysis of SARS-CoV-2 GRA Lineage: Identification of Novel Mutation n.28271delA in ORF8 and N Gene.' </i>Researchers are encouraged to utilize this dataset for further studies on viral evolution, transmission dynamics, and functional implications.Files Included:<b>Consensus Sequence (FASTA Format): </b>The complete genome sequence analyzed in this study, highlighting key mutations.<b>Variant Call File (VCF): </b>Detailed variant calls generated through genomic alignment and annotation pipelines.<b>Mutation List: </b>A curated list of identified mutations, including their genomic positions, amino acid changes, and predicted functional impacts.<b>Scripts and Code: </b>Custom scripts used for bioinformatics analyses, such as mutation calling, annotation, and visualization.Researchers are encouraged to reuse and build upon these data to further investigate the biological significance of these mutations.
DOI: 10.6084/m9.figshare.28914980.v1
title: Figure 6 raw data

description: Figure 6 described in Sabnis et al., 2025 CMLS
DOI: 10.6084/m9.figshare.7472318.v1
title: Acacia dealbata microsatellite dataset.xlsx

description: Genotype dataset for native and invasive <i>Acacia dealbata</i> populations generated by using microsatellite markers. The first two columns contain information on the sample identities - the first column ('sampleID') contains an individual ID for each of the 1057 analysed samples. The second column (popID) contains IDs for the 42 native and 18 South African populations. Columns 3 to 22 contain the genotypes for the ten microsatellite loci genotyped (i.e. two columns for each locus). This dataset was reported and population IDs and locus names are consistent with the information in:<br>Hirsch, H., Castillo, M.L., Impson, F.A.C., Kleinjan, C., Richardson, D.M., Le Roux, J.J. (accepted) Ghosts from the past: even comprehensive sampling of the native range may not be enough to unravel the introduction history of invasive species - the case of <i>Acacia dealbata</i> invasions in South Africa. American Journal of Botany.
DOI: 10.17632/hnd59x6gmg
title: The climatic and genetic heritage of Italian goat breeds with genomic SNP data

description: Genotype data in PLINK binary format associated with the following paper: Cortellari et al., 2021. 'The climatic and genetic heritage of Italian goat breeds with genomic SNP data' Scientific Reports. DOI: 10.1038/s41598-021-89900-2
DOI: 10.17632/xywtf7rks5
title: Optimization of Arsenic Removal from Aqueous Solution Using Indigenously Prepared Biosorbents from Fruit Peels through Response Surface Methodology

description: Sorption potential of the indigenously prepared biosorbents from orange, melon and banana peels were optimized for arsenic. The responses were generated using response surface methodology (RSM), results indicated a significant model with three sources of biosorbents was also influencing the levels of arsenic sorption significantly. The high R2 value (above 90%) indicating a good reliability of model and explained greater than 90% of variability among collected data. Linear effect of biosorbent dose concentrations (mg) were observed on the sorption efficiency for As. However, the sorption efficiency reduces significantly after the interaction time of 120 minutes. Under optimized predicted model actual experiment revealed that melon peel biosorbent uptake the 96.5mg, orange peel biosorbent uptake 83.5mg, and banana peel biosorbent uptake the 80.25mg of As. The response surface methodology showed that the indigenously prepared biosorbents had a great potential for removal of arsenic from water. And the sorption potential was greater in melon peel as compared to orange peel and banana peel respectively.
DOI: 10.6084/m9.figshare.14540886.v1
title: Supplementary Material for: Mapping Telemedicine in German Private Practice Urological Care: Implications for Transitioning beyond the COVID-19 Pandemic

description: <b><i>Background:</i></b> There are limited data on the use and concern of telemedicine among German urologists, and thus, there are no established guidelines for telemedical diagnosis, treatment, and prevention of urological indications. <b><i>Methods:</i></b> An anonymized survey was conducted among German private practice urologists during the 2019 coronavirus disease (COVID-19) pandemic. The χ<sup>2</sup> test, Mann-Whitney U-test, and Kruskal-Wallis test were used for statistical analysis. <b><i>Results:</i></b> 257 urologists were included in the final analysis. Thirty-five (14.0%) of urologists had used telemedicine as part of their consultation, and 221 (86.0%) had not used telemedicine. There was no difference between telemedicine adoption rates between rural and urban settings. Telemedicine users were significantly more satisfied with the information they had received regarding telemedicine issues. Users saw the greatest barrier to telemedicine that patients do not take up the offer of telemedicine. Nonusers were most concerned with unclear indications for telemedicine followed by lesser reimbursements during telemedicine than in-person visitations. Users were significantly more likely to use telemedicine beyond the COVID-19 pandemic. Urologists, who wanted to use the service in the future, wanted an active support by the German society of urology and guidelines for telemedicine. Last, users and nonusers preferred telemedicine for non-acute chronic diseases and follow-up visitations. <b><i>Conclusion:</i></b> Despite the COVID-19 pandemic, telemedicine remains a rarely used service among German private practice urologists. Ultimately, to overcome the current challenges, urologists require an active support for the service through the German Society of Urology and telemedical guidelines.
DOI: 10.6084/m9.figshare.24071193.v1
title: China's CPU index

description: A dataset on china's climate policy uncertainty index
DOI: 10.6084/m9.figshare.6143099.v1
title: Absolute responding study files

description: Text files for Amazon, IMDB and TripAdvisor Reviews
DOI: 10.6084/m9.figshare.833887.v1
title: SG hybrid trace of CG class C with 16 processors for Graphene

description: This is a SimGrid trace of the NASPB CG benchmark on a model of graphene using the Hybrid SMPI model. The trace was obtained by Georges Markomanolis using SimGrid 3.10.0.
DOI: 10.17608/k6.auckland.5971471.v1
title: NZ vehicles database

description: A copy of the New Zealand Vehicle Fleet database, downloaded from the Ministry of Transport web site (https://nzta.govt.nz/resources/new-zealand-motor-vehicle-register-statistics/new-zealand-vehicle-fleet-open-data-sets/) on 2017-12-14.<br>Uploaded as an example for a manuscript on fitting generalised linear models to large data sets
DOI: 10.17632/8p68zvz946
title: Data for: How global is "global inflation"?

description: Consumer price indices for 223 economies. Includes headline (all items) index, plus sub-indices for food, housing, energy and the remainder of the index (CPI ex food, housing and energy) along with a number of other exclusion indices. Includes weights for sub-indices where available. Also included are global inflation measures.
DOI: 10.17632/9bmc6w65d3
title: Raw Data of Digital Orientation, Digital Capability, Digital Innovation and Business Sustainability of Creative Small Businesses in Indonesia

description: The population of this research is all creative small businesses in the city of Malang, East Java, Indonesia. Three creative sub sectors: culinary, fashion and craft are chosen as the focus of study since those are the leading creative sub-sector in the city of Malang as well as in Indonesia. The data were gathered using structured questionnaires.