cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.at45bd
title: Occurrence Download

description: A dataset containing 323 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lolium persicum Boiss. & Hohen."
 ]
}

 The dataset includes 323 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0296410-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tx6jbw
title: Occurrence Download

description: A dataset containing 11945 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-74.85809 7.06273,-75.11627 6.77372,-74.71527 6.45723,-74.20441 6.82281,-74.38568 7.1881,-74.85809 7.06273))",
 "TaxonKey is Aves",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 11945 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010091-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7gfjha
title: Occurrence Download

description: A dataset containing 26877 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Panolis flammea (Denis & Schiffermüller), 1775"
 ]
}

 The dataset includes 26877 records from 158 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0227521-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w2ajgk
title: Occurrence Download

description: A dataset containing 35000 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is French Guiana",
 "GadmGid is GUF.2.8_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 35000 records from 175 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0296500-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9z3fgd
title: Occurrence Download

description: A dataset containing 3645 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Atriplex nummularia Lindl."
 ]
}

 The dataset includes 3645 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0296473-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xbkmzt
title: Occurrence Download

description: A dataset containing 1240 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudoeurycea cephalica (Cope, 1889)"
 ]
}

 The dataset includes 1240 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006019-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rkhut4
title: Occurrence Download

description: A dataset containing 1848 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "GadmGid is one of (COL.3_2, COL.3.1_2)",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Amphibia, Reptilia, Reptilia, Reptilia, Reptilia)"
 ]
}

 The dataset includes 1848 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021417-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17783352
title: NHIS_prayer_mortality

description: Selected sociodemographic, health, and mortality variables from National Health Interview Survey adults surveyed in 1999, 2002, 2007, 2012, and 2017. Data downloaded from IPUMS NHIS.

Lynn A. Blewett, Julia A. Rivera Drew, Andrew Fenelon, Miriam L. King, Kari C.W. Williams, Daniel Backman, Etienne Breton, Grace Cooper, and Stephanie Richards. IPUMS Health Surveys: National Health Interview Survey, Version 8.1 [dataset]. Minneapolis, MN: IPUMS, 2025. https://doi.org/10.18128/D071.V8.1
DOI: 10.5281/zenodo.17783353
title: NHIS_prayer_mortality

description: Selected sociodemographic, health, and mortality variables from National Health Interview Survey adults surveyed in 1999, 2002, 2007, 2012, and 2017. Data downloaded from IPUMS NHIS.

Lynn A. Blewett, Julia A. Rivera Drew, Andrew Fenelon, Miriam L. King, Kari C.W. Williams, Daniel Backman, Etienne Breton, Grace Cooper, and Stephanie Richards. IPUMS Health Surveys: National Health Interview Survey, Version 8.1 [dataset]. Minneapolis, MN: IPUMS, 2025. https://doi.org/10.18128/D071.V8.1
DOI: 10.6084/m9.figshare.29250962.v1
title: spammR Files

description: Here we have files related to our spammR R package that are needed to run the example vignette.
DOI: 10.17605/osf.io/j6gpk
title: The factorial validity of the Maslach Burnout Inventory-Student Version in a Nigerian University

description: Cross-cultural validation of the MBI student version in Nigeria
DOI: 10.17632/pggbrtmhrf
title: Disadoption of Modern Varieties in Nigeria

description: This is a secondary data collected for the purpose of estimating a Correlated Random Effect (CRE) and a Correlated Random Coefficient (CRC) models to answer the question: Does the production, cost reduction or profitability of improved rice cultivation differ significantly based on rice farmers’ disadoption history?
DOI: 10.17632/pggbrtmhrf.1
title: Disadoption of Modern Varieties in Nigeria

description: This is a secondary data collected for the purpose of estimating a Correlated Random Effect (CRE) and a Correlated Random Coefficient (CRC) models to answer the question: Does the production, cost reduction or profitability of improved rice cultivation differ significantly based on rice farmers’ disadoption history?
DOI: 10.17632/dbcfr25sxb.1
title: Processing tomato - RDI x Biodegradable mulching film

description: Italy is the third yielding country of processing tomato (Solanum lycopersicum L.) worldwide. However, its production is projected to be considerably affected by climate change effects, especially in drought-prone regions where maximizing water use efficiency is essential. A two-year on-farm experiment was carried out to compare full irrigation (T1) with two water-saving irrigation techniques on processing tomato: T2 (Regulated Deficit Irrigation, RDI) and T3 (RDI combined with black biodegradable mulching film). The experiment was carried out at two representative Southern Italy sites, where yield performance, sustainability, and fruit quality were assessed. T2 resulted in a 31% water saving and maintained comparable yields, increasing the irrigation (+44%) and economic (+56%) water productivities with respect to T1. T3 improved soluble solids content (+4%), marketable (+23%) and brix (+28%) yield, and irrigation (+71%) and economic (+90%) water productivities when compared to T1. Metabolic profiling further highlighted that T3 boosted key stress-related metabolites, including alanine (+50%), glycine (+31%), and proline (+44%) indicating an enhanced metabolic adaptation to water stress. Based on these findings, T3 is recommended as valuable practice for improving yield and sustainability while maintaining fruit quality in drought-prone areas.
DOI: 10.17632/dbcfr25sxb.3
title: Processing tomato - RDI x Biodegradable mulching film

description: Italy is the third yielding country of processing tomato (Solanum lycopersicum L.) worldwide. However, its production is projected to be considerably affected by climate change effects, especially in drought-prone regions where maximizing water use efficiency is essential. A two-year on-farm experiment was carried out to compare full irrigation (T1) with two water-saving irrigation techniques on processing tomato: T2 (Regulated Deficit Irrigation, RDI) and T3 (RDI combined with black biodegradable mulching film). The experiment was carried out at two representative Southern Italy sites, where yield performance, sustainability, and fruit quality were assessed. T2 resulted in a 31% water saving and maintained comparable yields, increasing the irrigation (+44%) and economic (+56%) water productivities with respect to T1. T3 improved soluble solids content (+4%), marketable (+23%) and brix (+28%) yield, and irrigation (+71%) and economic (+90%) water productivities when compared to T1. Metabolic profiling further highlighted that T3 boosted key stress-related metabolites, including alanine (+50%), glycine (+31%), and proline (+44%) indicating an enhanced metabolic adaptation to water stress. Based on these findings, T3 is recommended as valuable practice for improving yield and sustainability while maintaining fruit quality in drought-prone areas.
DOI: 10.17632/8btrkzw4z4
title: In vivo proteomic labeling reveals diverse proteomes for therapeutic targets. Wang et al.

description: Proteomics has played a revolutionary role in medical sciences. However, the barrier between isolated samples and in vivo intact microenvironment has posed a huge challenge that hinders the next-generation development of proteomics. Here, we successfully generated an in vivo protein labeling (IVPL) model based on a new labeling substrate set and homemade APEX2-EGFPf/f mice. The Btn-Ph-3F substrate exhibits good stability in organs possessing complex microenvironments and diverse degrading enzymes, while APEX2-EGFPf/f mice can be mated with any commercial Cre mice, enabling specific proteomic labeling for customized cell groups in distant organs in vivo. Moving beyond profiling in situ proteome for intestinal epithelium, mammary glands, and Treg cells within tumors, we further achieved labeling of trace amounts of exogenous proteomics of exosomes derived from cancer patients in live mice, and identified essential players such as LDHAL6A that eventually persist and promote pathological progression in recipient cells in vivo. Inhibition of LDHAL6A combined with paclitaxel treatment effectively suppressed triple-negative breast cancer growth and metastasis. Our work not only establishes an advanced model for in vivo proteomic labeling, but also profiles ultimately exosomal actors in recipient organs for targeted therapy.
DOI: 10.17632/8btrkzw4z4.1
title: In vivo proteomic labeling reveals diverse proteomes for therapeutic targets. Wang et al.

description: Proteomics has played a revolutionary role in medical sciences. However, the barrier between isolated samples and in vivo intact microenvironment has posed a huge challenge that hinders the next-generation development of proteomics. Here, we successfully generated an in vivo protein labeling (IVPL) model based on a new labeling substrate set and homemade APEX2-EGFPf/f mice. The Btn-Ph-3F substrate exhibits good stability in organs possessing complex microenvironments and diverse degrading enzymes, while APEX2-EGFPf/f mice can be mated with any commercial Cre mice, enabling specific proteomic labeling for customized cell groups in distant organs in vivo. Moving beyond profiling in situ proteome for intestinal epithelium, mammary glands, and Treg cells within tumors, we further achieved labeling of trace amounts of exogenous proteomics of exosomes derived from cancer patients in live mice, and identified essential players such as LDHAL6A that eventually persist and promote pathological progression in recipient cells in vivo. Inhibition of LDHAL6A combined with paclitaxel treatment effectively suppressed triple-negative breast cancer growth and metastasis. Our work not only establishes an advanced model for in vivo proteomic labeling, but also profiles ultimately exosomal actors in recipient organs for targeted therapy.
DOI: 10.17632/sjrv6wm5dh
title: Cell-Surface RNA Forms Ternary Complex with RNA-Binding Proteins and Heparan Sulfate to Recruit immune Receptors. Li and Joshi et al. Mol. Cell 2025

description: Uncropped images of Western blots, agarose gels and fluorescence microscopy.
DOI: 10.17632/sjrv6wm5dh.1
title: Cell-Surface RNA Forms Ternary Complex with RNA-Binding Proteins and Heparan Sulfate to Recruit immune Receptors. Li and Joshi et al. Mol. Cell 2025

description: Uncropped images of Western blots, agarose gels and fluorescence microscopy.
DOI: 10.6084/m9.figshare.28678325.v1
title: Supplement: Post-ER proteolysis by K48-ubiquitin-activated proteases

description: Polyubiquitin chains, linked through K48 or K63 of ubiquitin, target membrane proteins in the secretory system to degradative pathways. Whether these linkage isomers are functionally interchangeable is unclear. Here, we show that for post-endoplasmic reticulum (ER) proteins, K63-linked polyubiquitination induces multivesicular bodies (MVBs) sorting and lysosomal degradation. In contrast, K48-linked polyubiquitination induces shearing from the membrane. Substrates are cleaved by the proteasome and by two ubiquitin-activated proteases: Ddi1, a conserved cytosolic ubiquilin that generates cytosolic fragments, and Rbd2, an intramembrane rhomboid protease that produces lumenal fragments. Rbd2 localizes to Golgi/endosomes but also acts on ubiquitinated substrates at the vacuolar membrane. Ddi1’s catalytic core, the HDD-RVP domain, binds ubiquitin directly and is sufficient for ubiquitin-dependent proteolysis. Its activity is amplified by Ddi1’s auxiliary ubiquitin binding domains: an atypical UBL domain and a UBA domain. These findings demonstrate that polyubiquitin chains linked by different residues encode distinct degradative fates for post-ER proteins, and reveals two proteases that target ubiquitinated integral membrane cargo.
DOI: 10.15468/dl.kchd8r
title: Occurrence Download

description: A dataset containing 10241928 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Erithacus rubecula",
 {
 "or" : [
 "Year 1910-1956",
 "Year is greater than or equal to 1980"
 ]
 }
 ]
}

 The dataset includes 10241928 records from 6146 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021412-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jjk6ur
title: Occurrence Download

description: A dataset containing 130452 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phlogophora meticulosa (Linnaeus, 1758), Phloiotrya tenuis (Hampe, 1850))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 130452 records from 308 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0249000-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kgfmu9
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Venturia crataegi Aderh.",
 {
 "not" : {
 "Country" : [
 "is United States of America"
 ]
 }
 },
 {
 "not" : {
 "Country" : [
 "is Canada"
 ]
 }
 },
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 }
 ]
}

 The dataset includes 63 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111801-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ttmsgp
title: Occurrence Download

description: A dataset containing 572 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salpingogaster nigra Schiner, 1868"
 ]
}

 The dataset includes 572 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0248990-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rpxzys
title: Occurrence Download

description: A dataset containing 1162 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gymnocranius elongatus Senta, 1973"
 ]
}

 The dataset includes 1162 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111802-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xtxkbw
title: Occurrence Download

description: A dataset containing 23573923 species occurrences available in GBIF matching the query:
{
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 23573923 records from 3822 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066265-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9tk3pt
title: Occurrence Download

description: A dataset containing 271517 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Phalacrocorax carbo (Linnaeus, 1758)",
 "Year 2010-2011"
 ]
}

 The dataset includes 271517 records from 447 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014176-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27011593
title: mMaple-SYP-3, late pachytene

description: Each file includes a single nucleus where a region has been activated. All nuclei are from the late pachytene region of mMaple-SYP-3 worms.
DOI: 10.6084/m9.figshare.27011593.v1
title: mMaple-SYP-3, late pachytene

description: Each file includes a single nucleus where a region has been activated. All nuclei are from the late pachytene region of mMaple-SYP-3 worms.
DOI: 10.15468/dl.kmjw3z
title: Occurrence Download

description: A dataset containing 12501 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-123.82482 48.53846,-124.66208 41.97359,-122.70696 35.61342,-104.22906 30.83146,-104.22377 48.68648,-123.82482 48.53846))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Reithrodontomys megalotis (Baird, 1857)"
 ]
}

 The dataset includes 12501 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014187-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.snqkjg
title: Occurrence Download

description: A dataset listing the 353 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-98.60699 20.91381,-98.609 20.87076,-98.56467 20.85434,-98.5451 20.90574,-98.60699 20.91381))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 353 records were derived from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014182-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xevsry
title: Occurrence Download

description: A dataset containing 917655 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Phalacrocorax carbo (Linnaeus, 1758)",
 "Year 2020-2021"
 ]
}

 The dataset includes 917655 records from 1049 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014177-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27011572
title: mMaple-SYP-3, early pachytene

description: Each file includes a single nucleus where a region has been activated. All nuclei are from the early pachytene region of mMaple-SYP-3 worms.
DOI: 10.6084/m9.figshare.27011572.v1
title: mMaple-SYP-3, early pachytene

description: Each file includes a single nucleus where a region has been activated. All nuclei are from the early pachytene region of mMaple-SYP-3 worms.
DOI: 10.15468/dl.pcrfzb
title: Occurrence Download

description: A dataset containing 1786 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-104.79819 18.67500,-45.60336 18.67500,-45.60336 42.36308,-104.79819 42.36308,-104.79819 18.67500))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Etropus microstomus (Gill, 1864)"
 ]
}

 The dataset includes 1786 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014188-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.