cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.12613839
title: Mapping spatial organization and genetic cell state regulators to target immune evasion in ovarian cancer

description: This collection of data accompanies the study: Yeh, Aguirre, Laveroni et al. Mapping spatial organization and genetic cell-state regulators to target immune evasion in ovarian cancer. (2024). Nature Immunology.  Files are provided in the form of RObjects (extension .rds) or tabulated data (extension .csv) to reproduce the results and figures provided in the paper via the the R programming environment using Code provided here. 

 

Data collected and processed and published as a part of this study of tubo-ovarian high grade serous carcinoma (HGSC) includes: 



~2.5 million single cell spatial transcriptomics profiles from 130 HGSC tumors of 94 patients

Matching de-identified clinical annotations and clinical outcomes.

Matching targeted genomic data from the bulk tumor tissues.

Perturb-seq CRISPR knockout data in ovarian cancer cells in monoculture and co-culture with Natural Killer (NK) cells.


The spatial transcriptomics, Perturb-Seq, and matched H&E (Hematoxylin & Eosin, where available) are also provided via the Single Cell Portal with an interactive interface (SCP2640, SCP2641, SCP2650, SCP2644, SCP2646, SCP2707).

The collection also includes previously published data that was analyzed and used in this study to examine the generalizability of the findings, evaluate immunotherapy predictors, and for data-driven experimental design.

The SeuratObj.zip contains six SeuratObjects matching the five spatial transcriptomcs datasets (Discovery, Validation 1, Validation 2, Test 1 and Test 2) and Perturb-Seq data.

The Yeh2024.zip file includes the study's data and additional datasets/results to reproduce the study's figures. A detailed description of the files included in the repository is provided in `README.txt` and `README.xlsx`
DOI: 10.5281/zenodo.8327117
title: Mapping spatial organization and genetic cell state regulators to target immune evasion in ovarian cancer

description: This collection of data accompanies the study: Yeh, Aguirre, Laveroni et al. Mapping spatial organization and genetic cell-state regulators to target immune evasion in ovarian cancer. (2024). Nature Immunology.  Files are provided in the form of RObjects (extension .rds) or tabulated data (extension .csv) to reproduce the results and figures provided in the paper via the the R programming environment using Code provided here. 

 

Data collected and processed and published as a part of this study of tubo-ovarian high grade serous carcinoma (HGSC) includes: 



~2.5 million single cell spatial transcriptomics profiles from 130 HGSC tumors of 94 patients

Matching de-identified clinical annotations and clinical outcomes.

Matching targeted genomic data from the bulk tumor tissues.

Perturb-seq CRISPR knockout data in ovarian cancer cells in monoculture and co-culture with Natural Killer (NK) cells.


The spatial transcriptomics, Perturb-Seq, and matched H&E (Hematoxylin & Eosin, where available) are also provided via the Single Cell Portal with an interactive interface (SCP2640, SCP2641, SCP2650, SCP2644, SCP2646, SCP2707).

The collection also includes previously published data that was analyzed and used in this study to examine the generalizability of the findings, evaluate immunotherapy predictors, and for data-driven experimental design.

The SeuratObj.zip contains six SeuratObjects matching the five spatial transcriptomcs datasets (Discovery, Validation 1, Validation 2, Test 1 and Test 2) and Perturb-Seq data.

The Yeh2024.zip file includes the study's data and additional datasets/results to reproduce the study's figures. A detailed description of the files included in the repository is provided in `README.txt` and `README.xlsx`
DOI: 10.15126/surreydata.900689
title: SurrRoom 1.0 Dataset: Spatial Room Capture with Controlled Acoustic and Optical Measurements

description: Room acoustics, and perception thereof, is an important consideration in research, engineering, architecture, creative expression, and many other areas of human activity, particularly indoors. Typical room datasets either contain disparate measurements of diverse spaces, e.g., the OpenAir dataset (Murphy and Shelley, 2010), or rich sets of measurements within a few rooms, e.g., CD4M (Stewart and Sandler, 2010). Development of techniques, such as the RSAO, with 6 degrees of freedom (6DOF) movement in media applications require testing distance-related effects. Hence there is a need for consistency across room measurements in terms of source-room-receiver configuration, such as in (Lokki et al., 2011) but particularly for typical rooms. Those available containing ARIRs, BRIRs and with a consistent measurement procedure tend to be limited in range of rooms measured (Bacila and Lee, 2019). We designed an RIR dataset covering a range of rooms, with typical reverberation times, 1O-ARIRs and BRIRs, and regular measurement procedure including source-receiver distances from 1 m to 3 m in 0.5 m intervals. We measured seven rooms including one room with variable acoustics in two configurations – eight total sets. The rooms within this dataset have mid-range RT60s from 0.24 s to 1.00 s and volumes from 50 m3 to 1600 m3. The accompanying paper includes capture methods, various descriptive metrics and a description of applications across diverse domains. The dataset consists of .WAV files for IRs, .PLY files for LiDAR scans and image files for accompanying 3D pictures. IRs are also available in the SOFA format. The dataset is licensed under CC BY-NC 4.0 and can be accessed from https://cvssp.org/data/SurrRoom1_0/.
DOI: 10.15126/surreydata.00807454
title: International Journal of Life Cycle Assessment Literature Review Data

description: Literature review
description: Data collated from literature review in support of article submitted to International Journal of Life Cycle Assessment. Created: 18/03/2014. Last updated: 27/01/2015.
DOI: 10.15126/surreydata.901028
title: Curated datasets of ELSA HRS and CHARLS used in the PhD project: The role of depressive symptoms and cardiometabolic risk factors in the prediction of dementia: a cross-country comparison in England, the United States and China

description: This repository includes three curated datasets used in my PhD research on “The role of depressive symptoms and cardiometabolic risk factors in the prediction of dementia: a cross-country comparison in England, the United States and China”. The datasets are in SAV (SPSS) format and contain curated and harmonised data from three publicly available population-based databases: the English Longitudinal Study of Ageing (ELSA), Health and Retirement Study (HRS), China Health and Retirement Longitudinal Study (CHARLS). Permission for access may be granted on request to panagiota.kontari@gmail.com or p.kontari@surrey.ac.uk or kimberley.j.smith@surrey.ac.uk.
DOI: 10.15126/surreydata.00808295
title: Data for 'Fermion parity measurement and control in Majorana circuit quantum electrodynamics'

description: Data required for the graphs of the paper
DOI: 10.15468/dl.2ush9j
title: Occurrence Download

description: A dataset listing the 4005127 species recorded in GBIF matching the query:
{ }

 The dataset's 4005127 records were derived from 68609 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021819-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15126/surreydata.00844985
title: Data for the paper "An extended Hubbard model for mesoscopic transport in donor arrays in silicon"

description: Data obtained from numerical simulations
DOI: 10.15126/surreydata.00809594
title: Data for 'Temperature stable mid-infrared GaInAsSb/GaSb Vertical Cavity Surface Emitting Lasers (VCSELs)'

description: Dataset corresponding to paper with the above title. Abstract: GaInAsSb/GaSb based quantum well vertical cavity surface emitting lasers (VCSELs) operating in mid-infrared spectral range between 2 and 3 micrometres are of great importance for low cost gas monitoring applications. This paper discusses the efficiency and temperature sensitivity of the VCSELs emitting at 2.6 µm and the processes that must be controlled to provide temperature stable operation. We show that non-radiative Auger recombination dominates the threshold current and limits the device performance at room temperature. Critically, we demonstrate that the combined influence of non-radiative recombination and gain peak - cavity mode de-tuning determines the overall temperature sensitivity of the VCSELs. The results show that improved temperature stable operation around room temperature can only be achieved with a larger gain peak - cavity mode de-tuning, offsetting the significant effect of increasing non-radiative recombination with increasing temperature, a physical effect which must be accounted for in mid-infrared VCSEL design.
DOI: 10.15468/dl.xezg43
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Campylopterus phainopeplus Salvin & Godman, 1879"
 ]
}

 The dataset includes 47 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021865-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15126/surreydata.00807665
title: SCENE Digital Cinema Datasets

description: Datasets captured as a part of the EU project SCENE at Surrey in July 2014. The datasets contain dynamic content captured using an RGBD camera and a stereo camera as well as set models captured using a colour LIDAR and a Kinect sensor.
DOI: 10.15126/surreydata.00807707
title: IMPART multi-modal dataset

description: Multi-modal data footage and 3D reconstructions for various indoor/outdoor scenes
DOI: 10.15126/surreydata.00811053
title: Low field depoling phenomena in soft lead zirconate titanate ferroelectrics

description: ferroelectric hysteresis loops, piezo atomic force microscopy, electrical charge/discharge measurements
description: Raw data relating to the publication "Low field depoling phenomena in soft lead zirconate titanate ferroelectrics " | Version: 1.0
DOI: 10.15126/surreydata.900993
title: Dataset for the article "Turbulence statistics estimation across a step change in roughness via interpretable network-based modelling", (2024), G. Iacobello, M. Placidi, S. Ding, M. Carpentieri

description: Dataset description associated with the article “Turbulence statistics estimation across a step change in roughness via interpretable network-based modelling”, (2024), G. Iacobello, M. Placidi, S. Ding, M. Carpentieri. Files description:- ‘u_timetraces.txt’, ‘v_timetraces.txt’, and ‘w_timetraces.txt' include the instantaneous velocity values for the three velocity components u, v, and w in [m/s].- ‘XYZ_LDA_coordinatees.txt' includes the measurement coordinates (in [m[) with respect to the reference system.- ‘x_coordinatees.txt' and ‘z_coordinatees.txt' include the unique x and z coordinates (streamwise and vertical coordinates, respectively) in [m].
DOI: 10.15126/surreydata.00808746
title: The pendulum-slosh problem: simulation using a time-dependent conformal mapping dataset

description: Data set for the paper The pendulum-slosh problem: simulation using a time-dependent conformal mapping
DOI: 10.15126/surreydata.00810683
title: 3DCars

description: 3D tracking dataset from monocular videos. Contains short sequences of cars with strong out-of-plane rotation.
DOI: 10.15126/surreydata.00808010
title: Data for: Modelling changes in sleep timing and duration across the lifespan: changes in sleep homeostasis or circadian rhythmicity?

description: The data was generated using MATLAB.
description: Data generated using MATLAB by solving a differential equation model for sleep wake regulation.
DOI: 10.15126/surreydata.00813727
title: Data set for "The effects of self-selected light-dark cycles and social constraints on human sleep and circadian timing: a modeling approach"

description: Generated using Matlab
description: Data used in research article for Scientific Reports and MATLAB code used to generate the data. Publication available at: https://doi.org/10.1038/srep45158
DOI: 10.15126/surreydata.00807614
title: Data for 'Improving the perceptual quality of single-channel blind audio source separation'

description: Audio files, computer code, statistical data.
DOI: 10.15126/surreydata.00808005
title: Eco-Design Article Data

description: Literature review
description: Dataset supports an article submitted to the Eco-Design 2015 conference. Dataset contains a suymmary of all data used in the calculations and results discussed in the article.
DOI: 10.15126/surreydata.00811616
title: Data and Codes for reproducing the results in "Mean-Shift and Sparse Sampling Based SMC-PHD Filtering for Audio Informed Visual Speaker Tracking"

description: This dataset contains the Matlab codes/data for the implementation of PhD filtering algorithms developed in the paper "Mean-Shift and Sparse Sampling Based SMC-PHD Filtering for Audio Informed Visual Speaker Tracking", IEEE Transactions on Multimedia, 2016. | Version: version 1.0
DOI: 10.15126/surreydata.00808389
title: North West London Integrated Care Pilot

description: Routine health data set from primary and secondary care sources, from 130 practices across North West London
DOI: 10.15126/surreydata.00807708
title: S3A speaker tracking with Kinect2

description: A Kinect2 sensor was used, along with tools and software developed using Microsoft Kinect SDK
description: This dataset contains data recorded with a Kinect for Windows V2.0 in a studio set assembled in the Visual Media Laboratory, at the CVSSP, Surrey. Four sequences were recorded of people talking and slowly walking around a dummy head which is located at the centre of the room. Kinect data files are available in XEF format along with person tracking data stored in JSON format, image files containing RGB and depth maps and time stamps. Annotation data is also stored, marking where the tracker failed. | Version: 1
DOI: 10.15126/surreydata.00808303
title: Dataset for 2015 CGD paper on crystallisation of glycine from solution (Little, Sear and Keddie)

description: Data on crystallisation of glycine from solution. Includes images of crystallising plates that are the raw data plus spreedsheets containing the fractions of samples crystallised as a function of time, plus analysis of this data. For paper in Crystal Growth and Design 2015, by Little, Sear and Keddie
DOI: 10.15126/surreydata.00812209
title: Wind turbine wake in stable boundary layer 1

description: Laser-Doppler anemometry plus cold-wire temperature probe techniques in stratified flow wind tunnel; rotating model wind turbine.
description: Wind tunnel simulation of a wind turbine wake in a stable atmospheric boundary layer | Version: 1
DOI: 10.15468/dl.rqavwe
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rhinella spinulosa (Wiegmann, 1834)",
 "Year 2016-2024"
 ]
}

 The dataset includes 50 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021866-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15126/surreydata.900994
title: Data for Tailoring the A and B site of Fe-based perovskitesfor high selectivity in the reverse Water-Gas Shift reaction

description: This includes the experimental data for the reverse water gas shift reaction. The data uploaded includes XRD, SEM, XPS and catalytic results for the materials used in the reaction. All the data is open access and is in .txt and .jpg format which can be accessible by any text editor.
DOI: 10.15126/surreydata.00807660
title: Data for 'High Quality Carbon Nanotubes on Conductive Substrates Grown at Low Temperatures'

description: Electron microscopy images, Raman spectra, AFM data, Current-voltage data
DOI: 10.15126/surreydata.00808322
title: Pose_Holt11

description: The database was collected for our ICCV'11 (workshop) paper Putting the pieces together: Connected Poselets for Human Pose Estimation. The dataset contains 345 training images and 347 test images of 3 people. For each frame, a depth image of 640x480 pixels and the annotation is provided. Ground truth is in the form of the (x,y) coordinates (i.e.2D image plane locations) of each of the 10 tracked joints.
DOI: 10.15126/surreydata.00810857
title: SPREE project Water Use and Wellbeing Survey in SE England

description: A face-to-face survey was conducted by paid interviewers on high streets within the supply area of South East Water, with the interviewer completing the survey on behalf of the interviewee. All respondents who completed the full survey were paid £1 for th
description: A survey of 343 respondents in south east England was conducted in the summer 2014. The survey collected data on household characteristics, personal wellbeing, environmental attitudes, water use attitudes, and willingness to install water saving equipment in their house. Actual household water consumption data for the previous two years was obtained from the South East Water company for some survey respondents.
DOI: 10.15126/surreydata.00813700
title: Data for 'Hyperuniform Disordered Phononic Structures'

description: Computer simulations
description: Data set accompanying article with the same title | Version: 1
DOI: 10.15126/surreydata.00808314
title: West Wittering Beach Data For Evaluation Of Planetary Monocular Vision-based Localisation, Navigation and Mapping Techniques

description: Teleoperated rover
description: The dataset was generated by a teleoperated rover, with a monocular web camera, and GPS receiver. Images, teleoperation commands and GPS positions were recorded as the rover moved.
DOI: 10.15126/surreydata.900022
title: Multi-View Labelling (MVL) Dataset

description: To overcome the shortage of real-world multi-view multiple people, we introduce a new synthetic multi-view multiple people labelling dataset named Multi-View 3D Humans (MV3DHumans). This dataset is a large-scale synthetic image dataset that was generated for multi-view multiple people detection, labelling and segmentation tasks. The MV3DHumans dataset contains 1200 scenes captured by multiple cameras, with 4, 6, 8 or 10 people in each scene. Each scene is captured by 16 cameras with overlapping field of views. The MV3DHumans dataset provides RGB images with resolution of 640 × 480. Ground truth annotations including bounding boxes, instance masks and multi-view correspondences, as well as camera calibrations are provided in the dataset.
DOI: 10.15468/dl.z3h5qd
title: Occurrence Download

description: A dataset containing 910786 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyperus L."
 ]
}

 The dataset includes 910786 records from 2811 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021852-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8hsrc4
title: Occurrence Download

description: A dataset containing 251 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Elatine ambigua Wight)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 251 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014937-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hd28vt
title: Occurrence Download

description: A dataset containing 8795430 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 8795430 records from 694 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004218-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21942/uva.28049231
title: Data

description: Data for the manuscript "Perceptual and attentional impairments of conscious access involve distinct neural mechanisms despite equal task performance" published in eLife.
DOI: 10.21942/uva.28049231.v2
title: Data

description: Data for the manuscript "Perceptual and attentional impairments of conscious access involve distinct neural mechanisms despite equal task performance" published in eLife.
DOI: 10.21942/uva.28049231.v1
title: Data

description: Data for the manuscript "Perceptual versus attentional impairments of conscious access: Distinct neural mechanisms despite equal task performance" published in eLife.
DOI: 10.15468/dl.d7yfdk
title: Occurrence Download

description: A dataset containing 237160 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Observation.org, Nature data from around the World, iNaturalist Research-grade Observations)",
 "IucnRedListCategory is one of (EX, EW, CR, EN, VU, NT, LC, DD, NE)",
 "Year 2000-2001"
 ]
}

 The dataset includes 237160 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007694-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-04.3083347/2548095
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3083350/2548096
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3083355/2548097
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3083356/2548098
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3083359/2548099
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3083367/2548100
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3083374/2548101
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3083379/2548102
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3083384/2548103
title: Data for EMSL Project 51287 from April 2024
DOI: 10.15468/dl.n9jbv6
title: Occurrence Download

description: A dataset containing 570 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Nicotiana tabacum L."
 ]
}

 The dataset includes 570 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007699-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25582/data.2024-04.3083390/2548104
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3083391/2548105
title: Data for EMSL Project 51287 from April 2024
DOI: 10.25582/data.2024-04.3083402/2548106
title: Data for EMSL Project 51287 from April 2024