cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5907643
title: Examining the Thermal Stability of an Al-Mg-Sc Alloy Processed by High-Pressure Torsion

description: An Al-3%Mg-0.2%Sc alloy was solution treated and subjected to 10 turns of high-pressure torsion (HPT). Thereafter, the HPT-processed material was annealed for 1 hour at temperatures ranging from 423 to 773 K and its mechanical properties and microstructural evolution were examined using microhardness measurements and EBSD analysis. The results demonstrate that the Al-Mg-Sc alloy exhibits an average microhardness of ~190 Hv and an average grain size of ~140 nm immediately after HPT processing and also after further annealing at 423 K. Conversely, it is shown that annealing at temperatures above 473 K leads to a substantial decrease in the hardness values as well as a sharp increase in the grain size of the material previously processed by HPT. In addition, detailed EBSD analysis revealed the formation of a bi-modal distribution of grains after annealing at temperatures from 623 to 773 K, and this becomes more uniform with increasing temperatures.
DOI: 10.6084/m9.figshare.5907643.v1
title: Examining the Thermal Stability of an Al-Mg-Sc Alloy Processed by High-Pressure Torsion

description: An Al-3%Mg-0.2%Sc alloy was solution treated and subjected to 10 turns of high-pressure torsion (HPT). Thereafter, the HPT-processed material was annealed for 1 hour at temperatures ranging from 423 to 773 K and its mechanical properties and microstructural evolution were examined using microhardness measurements and EBSD analysis. The results demonstrate that the Al-Mg-Sc alloy exhibits an average microhardness of ~190 Hv and an average grain size of ~140 nm immediately after HPT processing and also after further annealing at 423 K. Conversely, it is shown that annealing at temperatures above 473 K leads to a substantial decrease in the hardness values as well as a sharp increase in the grain size of the material previously processed by HPT. In addition, detailed EBSD analysis revealed the formation of a bi-modal distribution of grains after annealing at temperatures from 623 to 773 K, and this becomes more uniform with increasing temperatures.
DOI: 10.6084/m9.figshare.5907694
title: OXIDATION OF CYCLOHEXANOL ON PHOSPHOTUNGSTIC ACID ANION INTERCALATED LAYERED DOUBLE HYDROXIDES WITH AQUEOUS H2O2 AS OXIDANT

description: The layered double hydroxides (LDH) of Mg2AlNi and Mg3Al pillared by Keggin-type phosphotungstic acid anion (POM), i.e. Mg2AlNi-POM LDH and Mg3Al-POM LDH were synthesized by an ion-exchange method. The synthesized POM intercalated LDH compounds were characterized using various techniques such as FTIR, XRD, TGA and BET. The observed results show that the obtained catalysts retain the layer structure of LDH. Compared with the binary Mg3Al-POM LDH, the ternary Mg2AlNi-POM LDH catalyst indicated a higher thermal and chemical stability. The catalytic activity of the resulting LDH-POM was also assessed in the green oxidation of cyclohexanol with aqueous H2O2 as an oxidant. The Mg2AlNi-POM LDH showed a much higher conversion and selectivity for cyclohexanone than the corresponding Mg3Al-POM LDH catalyst.
DOI: 10.6084/m9.figshare.5907694.v1
title: OXIDATION OF CYCLOHEXANOL ON PHOSPHOTUNGSTIC ACID ANION INTERCALATED LAYERED DOUBLE HYDROXIDES WITH AQUEOUS H2O2 AS OXIDANT

description: The layered double hydroxides (LDH) of Mg2AlNi and Mg3Al pillared by Keggin-type phosphotungstic acid anion (POM), i.e. Mg2AlNi-POM LDH and Mg3Al-POM LDH were synthesized by an ion-exchange method. The synthesized POM intercalated LDH compounds were characterized using various techniques such as FTIR, XRD, TGA and BET. The observed results show that the obtained catalysts retain the layer structure of LDH. Compared with the binary Mg3Al-POM LDH, the ternary Mg2AlNi-POM LDH catalyst indicated a higher thermal and chemical stability. The catalytic activity of the resulting LDH-POM was also assessed in the green oxidation of cyclohexanol with aqueous H2O2 as an oxidant. The Mg2AlNi-POM LDH showed a much higher conversion and selectivity for cyclohexanone than the corresponding Mg3Al-POM LDH catalyst.
DOI: 10.6084/m9.figshare.5908393
title: Additional file 1: Table S1. of A novel joint analysis framework improves identification of differentially expressed genes in cross disease transcriptomic analysis

description: Comparison of average sensitivity and FDR between single and joint analysis. (XLSX 16Â kb)
DOI: 10.6084/m9.figshare.5908393.v1
title: Additional file 1: Table S1. of A novel joint analysis framework improves identification of differentially expressed genes in cross disease transcriptomic analysis

description: Comparison of average sensitivity and FDR between single and joint analysis. (XLSX 16Â kb)
DOI: 10.6084/m9.figshare.5908408
title: Additional file 2: Table S2. of A novel joint analysis framework improves identification of differentially expressed genes in cross disease transcriptomic analysis

description: Comparison of estimated similarity from joint analysis and true similarity. (XLSX 8Â kb)
DOI: 10.6084/m9.figshare.5908408.v1
title: Additional file 2: Table S2. of A novel joint analysis framework improves identification of differentially expressed genes in cross disease transcriptomic analysis

description: Comparison of estimated similarity from joint analysis and true similarity. (XLSX 8Â kb)
DOI: 10.6084/m9.figshare.5908432
title: Additional file 3: Table S3. of A novel joint analysis framework improves identification of differentially expressed genes in cross disease transcriptomic analysis

description: Complete DE gene lists identified by joint analysis. (XLSX 81Â kb)
DOI: 10.6084/m9.figshare.5908432.v1
title: Additional file 3: Table S3. of A novel joint analysis framework improves identification of differentially expressed genes in cross disease transcriptomic analysis

description: Complete DE gene lists identified by joint analysis. (XLSX 81Â kb)
DOI: 10.6084/m9.figshare.5908441
title: Additional file 4: Table S4. of A novel joint analysis framework improves identification of differentially expressed genes in cross disease transcriptomic analysis

description: Overlapped genes comparison between single data set and joint analysis. (XLSX 8Â kb)
DOI: 10.6084/m9.figshare.5908441.v1
title: Additional file 4: Table S4. of A novel joint analysis framework improves identification of differentially expressed genes in cross disease transcriptomic analysis

description: Overlapped genes comparison between single data set and joint analysis. (XLSX 8Â kb)
DOI: 10.23729/93ada6af-f814-4b52-9a27-8f2737a20619
title: SMEAR I Nuorttiaapa meteorology

description: This dataset contains long-term measurements of meteorology performed at SMEAR I Nuorttiaapa research station in Savukoski, Finland, during years 2017–2022.

The data were exported from SMEAR database on the dataset release date. Most recent version of the data are available at https://smear.avaa.csc.fi/.
DOI: 10.6084/m9.figshare.5908666
title: Additional file 6: of MCM family in HCC: MCM6 indicates adverse tumor features and poor outcomes and promotes S/G2 cell cycle progression

description: PCR data of cohort1. (XLS 59 kb)
DOI: 10.6084/m9.figshare.5908666.v1
title: Additional file 6: of MCM family in HCC: MCM6 indicates adverse tumor features and poor outcomes and promotes S/G2 cell cycle progression

description: PCR data of cohort1. (XLS 59 kb)
DOI: 10.6084/m9.figshare.5908684
title: Additional file 7 of MCM family in HCC: MCM6 indicates adverse tumor features and poor outcomes and promotes S/G2 cell cycle progression

description: PCR data of cohort2. (XLS 46 kb)
DOI: 10.6084/m9.figshare.5908684.v1
title: Additional file 7 of MCM family in HCC: MCM6 indicates adverse tumor features and poor outcomes and promotes S/G2 cell cycle progression

description: PCR data of cohort2. (XLS 46 kb)
DOI: 10.6084/m9.figshare.5908882
title: Airborne particulate matter impairs corneal epithelial cells migration via disturbing FAK/RhoA signaling pathway and cytoskeleton organization

description: <b>Background:</b> Cornea is the outmost structure of the eye and exposed directly to the air pollution. However, little is known about the effect of PM2.5 on corneal epithelium, which is critical for maintenance of cornea homeostasis and visual function. <b>Objective:</b> We investigated the influence of PM2.5 exposure on corneal epithelial migration and the possible mechanisms involved in the process. <b>Methods:</b> We observed wound healing in mouse model of cornea abrasion, evaluated the migration and mobility of cultured corneal epithelial cells with wound scratch assay and Transwell migration assay, detected the phosphorylation and interaction of FAK/paxillin with immunofluorescence and immunoprecipitation, and determined the RhoA activity and actin reorganization, in response to PM2.5 exposure. <b>Results:</b> Exposure to PM2.5 remarkably inhibited corneal epithelial cell migration both in mouse model of corneal abrasion and in cell culture model. We found the phosphorylation and interaction of FAK/paxillin, RhoA activity as well as actin reorganization were suppressed by PM2.5 exposure. Moreover, formation of ROS might play a role in the action of PM2.5. <b>Conclusions</b>: PM2.5 exposure could result in delay of corneal epithelium wound healing by inhibiting cell migration, thus more attention should be paid to the potential risk of corneal infection and effort should be made to protect eyes against impairment induced by PM2.5
DOI: 10.6084/m9.figshare.5908882.v1
title: Airborne particulate matter impairs corneal epithelial cells migration via disturbing FAK/RhoA signaling pathway and cytoskeleton organization

description: <b>Background:</b> Cornea is the outmost structure of the eye and exposed directly to the air pollution. However, little is known about the effect of PM2.5 on corneal epithelium, which is critical for maintenance of cornea homeostasis and visual function. <b>Objective:</b> We investigated the influence of PM2.5 exposure on corneal epithelial migration and the possible mechanisms involved in the process. <b>Methods:</b> We observed wound healing in mouse model of cornea abrasion, evaluated the migration and mobility of cultured corneal epithelial cells with wound scratch assay and Transwell migration assay, detected the phosphorylation and interaction of FAK/paxillin with immunofluorescence and immunoprecipitation, and determined the RhoA activity and actin reorganization, in response to PM2.5 exposure. <b>Results:</b> Exposure to PM2.5 remarkably inhibited corneal epithelial cell migration both in mouse model of corneal abrasion and in cell culture model. We found the phosphorylation and interaction of FAK/paxillin, RhoA activity as well as actin reorganization were suppressed by PM2.5 exposure. Moreover, formation of ROS might play a role in the action of PM2.5. <b>Conclusions</b>: PM2.5 exposure could result in delay of corneal epithelium wound healing by inhibiting cell migration, thus more attention should be paid to the potential risk of corneal infection and effort should be made to protect eyes against impairment induced by PM2.5
DOI: 10.6084/m9.figshare.5914186
title: Additional file 2: of The HNF1α-regulated lncRNA HNF1A-AS1 reverses the malignancy of hepatocellular carcinoma by enhancing the phosphatase activity of SHP-1

description: Table S2. Fifty-one annotated lncRNAs upregulated by HNF1α. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.5914186.v1
title: Additional file 2: of The HNF1α-regulated lncRNA HNF1A-AS1 reverses the malignancy of hepatocellular carcinoma by enhancing the phosphatase activity of SHP-1

description: Table S2. Fifty-one annotated lncRNAs upregulated by HNF1α. (XLSX 16 kb)
DOI: 10.23729/27c41a6b-b5e8-403d-9a98-a451d1dcf499
title: SMEAR II Lake Kuivajärvi meteorology, water quality and eddy covariance

description: This dataset contains time series of meteorology, water quality and turbulent exchange of CO2, CH4, heat and momentum measured at SMEAR II Lake Kuivajärvi site near Hyytiälä Forestry Field Station, Juupajoki, Finland during years 2012–2022.

The data were exported from SMEAR database on the dataset release date. Most recent version of the data are available at https://smear.avaa.csc.fi/.
DOI: 10.6084/m9.figshare.5917858
title: Additional file 4: of Oncoprotein HBXIP enhances HOXB13 acetylation and co-activates HOXB13 to confer tamoxifen resistance in breast cancer

description: Figure S1. HBXIP contributes to TAM resistance in breast cancer. Figure S2. HBXIP induces TAM resistance by increasing the protein level of HOXB13. Figure S3. HBXIP enhances acetylation of HOXB13 at K277 site via acetylase p300. Figure S4. HBXIP-enhanced acetylation of HOXB13 stabilizes HOXB13 in the facilitation of TAM resistance. Figure S5. HBXIP co-activates HOXB13 to stimulate IL-6 transcription. Figure S6. ASA suppresses HBXIP/HOXB13 axis by reducing HBXIP expression. Figure S7. ASA-inhibited HBXIP/HOXB13 axis contributes to the reversal of TAM resistance. Figure S8. Diagram of working model. (ZIP 1058 kb)
DOI: 10.6084/m9.figshare.5917858.v1
title: Additional file 4: of Oncoprotein HBXIP enhances HOXB13 acetylation and co-activates HOXB13 to confer tamoxifen resistance in breast cancer

description: Figure S1. HBXIP contributes to TAM resistance in breast cancer. Figure S2. HBXIP induces TAM resistance by increasing the protein level of HOXB13. Figure S3. HBXIP enhances acetylation of HOXB13 at K277 site via acetylase p300. Figure S4. HBXIP-enhanced acetylation of HOXB13 stabilizes HOXB13 in the facilitation of TAM resistance. Figure S5. HBXIP co-activates HOXB13 to stimulate IL-6 transcription. Figure S6. ASA suppresses HBXIP/HOXB13 axis by reducing HBXIP expression. Figure S7. ASA-inhibited HBXIP/HOXB13 axis contributes to the reversal of TAM resistance. Figure S8. Diagram of working model. (ZIP 1058 kb)
DOI: 10.6084/m9.figshare.5917978
title: MOESM1 of Integrated TCGA analysis implicates lncRNA CTB-193M12.5 as a prognostic factor in lung adenocarcinoma

description: Additional file 1: Table S1. CTB-193M12.5 target gene predicted by RIblast.
DOI: 10.6084/m9.figshare.5917978.v1
title: MOESM1 of Integrated TCGA analysis implicates lncRNA CTB-193M12.5 as a prognostic factor in lung adenocarcinoma

description: Additional file 1: Table S1. CTB-193M12.5 target gene predicted by RIblast.
DOI: 10.6084/m9.figshare.5918062
title: Additional file 2: of Transcriptional profiles of different states of cancer stem cells in triple-negative breast cancer

description: Table S2.Â GO analysis of 391 DEGs by DAVIDÂ 6.8. (XLS 35 kb)
DOI: 10.6084/m9.figshare.5918062.v1
title: Additional file 2: of Transcriptional profiles of different states of cancer stem cells in triple-negative breast cancer

description: Table S2.Â GO analysis of 391 DEGs by DAVIDÂ 6.8. (XLS 35 kb)
DOI: 10.6084/m9.figshare.5918089
title: Additional file 3: of Transcriptional profiles of different states of cancer stem cells in triple-negative breast cancer

description: Table S3. GSEA summary. (XLSX 360 kb)
DOI: 10.6084/m9.figshare.5918089.v1
title: Additional file 3: of Transcriptional profiles of different states of cancer stem cells in triple-negative breast cancer

description: Table S3. GSEA summary. (XLSX 360 kb)
DOI: 10.6084/m9.figshare.5918110
title: Additional file 4: of Transcriptional profiles of different states of cancer stem cells in triple-negative breast cancer

description: Table S4. The KEGG pathway and GO analysis of 513 DEGs. (XLS 35 kb)
DOI: 10.6084/m9.figshare.5918110.v1
title: Additional file 4: of Transcriptional profiles of different states of cancer stem cells in triple-negative breast cancer

description: Table S4. The KEGG pathway and GO analysis of 513 DEGs. (XLS 35 kb)
DOI: 10.6084/m9.figshare.5918179
title: Additional file 12: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S8. Cis-elements in GmbZIP promoters. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.5918194
title: Additional file 1: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: TableS3. Synteny blocks of bZIP genes within soybean genome. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.5918194.v1
title: Additional file 1: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: TableS3. Synteny blocks of bZIP genes within soybean genome. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.5918200
title: Additional file 12: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Tissues specific expression and bias expression of A_ and D_subgenome genes and comparison of expression profiles and the phylogenetic trees. (XLSX 2598Â kb)
DOI: 10.6084/m9.figshare.5918200.v1
title: Additional file 12: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Tissues specific expression and bias expression of A_ and D_subgenome genes and comparison of expression profiles and the phylogenetic trees. (XLSX 2598Â kb)
DOI: 10.6084/m9.figshare.5918215
title: Additional file 2: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S4. Synteny blocks of bZIP genes between soybean and Arabidopsis genomes. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.5918215.v1
title: Additional file 2: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S4. Synteny blocks of bZIP genes between soybean and Arabidopsis genomes. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.5918227
title: Additional file 13: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Ka and Ks values of bHLH duplicated pairs and expression Pearson correlation coefficients (r). (XLSX 270Â kb)
DOI: 10.6084/m9.figshare.5918227.v1
title: Additional file 13: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Ka and Ks values of bHLH duplicated pairs and expression Pearson correlation coefficients (r). (XLSX 270Â kb)
DOI: 10.6084/m9.figshare.5918233
title: Additional file 3: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S5. The expression profiles of the soybean bZIP genes in different tissues. (XLSX 5886 kb)
DOI: 10.6084/m9.figshare.5918233.v1
title: Additional file 3: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S5. The expression profiles of the soybean bZIP genes in different tissues. (XLSX 5886 kb)
DOI: 10.6084/m9.figshare.5918245
title: Additional file 14: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Primers used in this study. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.5918245.v1
title: Additional file 14: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Primers used in this study. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.5918251
title: Additional file 4: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S9. Primers used in qRT-PCR analysis. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.5918251.v1
title: Additional file 4: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S9. Primers used in qRT-PCR analysis. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.5918263
title: Additional file 1: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Summary of information on the bHLH proteins in cotton and other species. (XLSX 62Â kb)
DOI: 10.6084/m9.figshare.5918263.v1
title: Additional file 1: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Summary of information on the bHLH proteins in cotton and other species. (XLSX 62Â kb)
DOI: 10.6084/m9.figshare.5918266
title: Additional file 5: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S1. Characteristics of bZIPs in soybean. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.5918266.v1
title: Additional file 5: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S1. Characteristics of bZIPs in soybean. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.5918281
title: Additional file 6: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S2. The accession numbers of bZIPs in soybean and Arabidopsis. (XLSX 5633 kb)
DOI: 10.6084/m9.figshare.5918281.v1
title: Additional file 6: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S2. The accession numbers of bZIPs in soybean and Arabidopsis. (XLSX 5633 kb)
DOI: 10.6084/m9.figshare.5918287
title: Additional file 2: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Statistical analysis of amino acids in the basic motif and their DNA-binding activities. (XLSX 81Â kb)
DOI: 10.6084/m9.figshare.5918287.v1
title: Additional file 2: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Statistical analysis of amino acids in the basic motif and their DNA-binding activities. (XLSX 81Â kb)
DOI: 10.6084/m9.figshare.5918302
title: Additional file 3: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Intron distribution within the bHLH domain of cotton bHLH proteins (XLSX 46Â kb)
DOI: 10.6084/m9.figshare.5918302.v1
title: Additional file 3: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Intron distribution within the bHLH domain of cotton bHLH proteins (XLSX 46Â kb)
DOI: 10.6084/m9.figshare.5918308
title: Additional file 4: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Ortholog and homoeologous genes identified in cacao or cottons. (XLSX 51Â kb)
DOI: 10.6084/m9.figshare.5918308.v1
title: Additional file 4: of Divergence and evolution of cotton bHLH proteins from diploid to allotetraploid

description: Ortholog and homoeologous genes identified in cacao or cottons. (XLSX 51Â kb)
DOI: 10.6084/m9.figshare.5918311
title: Additional file 8: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S6. The expression profiles (log2-based values) of the soybean bZIP genes after drought treatment. In this experiment, two-week-old soybean seedlings were transferred to the drought conditions for a week, and drought stress was imposed by withholding water for 7Â days. After 7Â days of treatment, the leaves were collected for experiment [30]. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.5918311.v1
title: Additional file 8: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S6. The expression profiles (log2-based values) of the soybean bZIP genes after drought treatment. In this experiment, two-week-old soybean seedlings were transferred to the drought conditions for a week, and drought stress was imposed by withholding water for 7Â days. After 7Â days of treatment, the leaves were collected for experiment [30]. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.5918323
title: Additional file 9: of Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

description: Table S7. The expression profiles (log2-based values) of the soybean bZIP genes after flooding treatment. In this experiment, two-week-old soybean seedlings were transferred to the flooding conditions for a week, and flooding stress was imposed by placing the pots into a bigger pot with a trashcan liner filled up to a water level of 4Â cm above the soil surface for 7Â days. After 7Â days of treatment, the leaves were collected for experiment [30]. (XLSX 16 kb)