cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2gs9j3
title: CCDC 2287475: Experimental Crystal Structure Determination

description: Related Article: Yuanjiu Xiao, Tong-Tong Xu, Jin-Lan Zhou, Feng Wu, Lei Tang, Ruo-Yi Liu, Wen-Biao Wu, Jian-Jun Feng|2023|Chemical Science|14|13060|doi:10.1039/D3SC04457B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.26180/24287338.v1
title: ­­Interrupted time series datasets from studies investigating the impact of interventions or exposures in public health and social science: A data note

description: A repository of ITS datasets. More information can be found in the associated data note.
DOI: 10.6084/m9.figshare.21070342.v3
title: mind wandering and depression

description: HLM data
DOI: 10.5281/zenodo.10201758
title: Dataset for the paper "Wedge Plasticity and a Minimalist Dynamic Rupture Model for the 2011 Mw 9.1 Tohoku-Oki Earthquake and Tsunami" in Tectonophysics

description: This dataset contains the Fortran source codes and input files to reproduce the results in the paper "Wedge Plasticity and a Minimalist Dynamic Rupture Model for the 2011 Mw 9.1 Tohoku-Oki Earthquake and Tsunami". Sample Matlab scripts are included to visualize the results. Model results, such as final fault slip, rupture times, stress changes on fault, final surface displacements, and moment density tensors in the wedge associated with inelastic deformation, are also included as ascii files. See readme for more details.
DOI: 10.5281/zenodo.10201759
title: Dataset for the paper "Wedge Plasticity and a Minimalist Dynamic Rupture Model for the 2011 Mw 9.1 Tohoku-Oki Earthquake and Tsunami" in Tectonophysics

description: This dataset contains the Fortran source codes and input files to reproduce the results in the paper "Wedge Plasticity and a Minimalist Dynamic Rupture Model for the 2011 Mw 9.1 Tohoku-Oki Earthquake and Tsunami". Sample Matlab scripts are included to visualize the results. Model results, such as final fault slip, rupture times, stress changes on fault, final surface displacements, and moment density tensors in the wedge associated with inelastic deformation, are also included as ascii files. See readme for more details.
DOI: 10.5281/zenodo.10083739
title: Storm Surge Dataset

description: This is the dataset used in a paper of "Model of Storm Surge Maximum Water Level Increase in a Coastal Area Using Ensemble Machine Learning and Explicable Algorithm"
DOI: 10.5281/zenodo.10083740
title: Storm Surge Dataset

description: This is the dataset used in a paper of "Model of Storm Surge Maximum Water Level Increase in a Coastal Area Using Ensemble Machine Learning and Explicable Algorithm"
DOI: 10.7945/qg5w-ny75
title: Microsatellite analysis of Invasive Wintercreeper (Euonymus fortunei), associated cultivars, and invasive E. alatus
DOI: 10.25959/wm5g-b990
title: Mega-Efficient Wildlife Classifier (MEWC) Case Study

description: We provide training, test and inference data for the Mega-Efficient Wildlife Classifier (MEWC) workflow, using an example camera-trap dataset collected and curated by Barry Brook and Jessie Buettel, from Tasmania, Australia. These images are drawn from a variety of environmental contexts (dry and wet temperate eucalypt forest, woodland, and grasslands) using white-, infra-red (IR) and no-glow flash types from Cuddeback, Reconyx, Swift and Bushnell cameras. The following species or aggregated classes are represented in the dataset: Tasmanian Pademelon (Thylogale billardierii), Bennetts Wallaby (Notamacropus rufogriseus), Tasmanian Devil (Sarcophilus harrisii), Feral Cat (Felis catus), Bare-nosed Wombat (Vombatus ursinus), Brushtail Possum (Trichosurus vulpecula), Fallow Deer (Dama dama), Southern Brown Bandicoot (Isoodon obesulus), Currawong (Black: Strepera fuliginosa, Grey: S. versicolor) and Bronzewing (Brush: Phaps elegans, Common: P. chalcoptera). The latter two classes are birds, each of which consist of an aggregation of two species within a genus; the former eight are mammals. 

For implementing the classifier training, we provide 4,000 train and 1,000 test images for each of 10 different classes, for a total of 50,000 expert-labelled snips (each sized at 600- × 600-pixel, after being extracted from their original images using the MEWC-Snip tool). For demonstrating the detection, inference, and post-processing pipelines (EXIF writing and image sorting), we provide a sequence of 100 images for each of four field cameras that were not used in training, located on the lead author’s rural property in southern Tasmania: C3: IR flash, C7: white flash, C15: no-glow flash and C21: inbuilt IR flash. Other than the target wildlife, these images include some representations of blank images, humans (the lead author), and vehicles (trail-bike motorcycle), to demonstrate the four broad classes designated by the MegaDetector prior to classification on the animal images.
DOI: 10.5281/zenodo.10099456
title: Environmental Footprints of Greater Melbourne

description: Environmental footprints of Greater Melbourne, 2021
Primary data sources: EXIOBASE MR EE SUT/IOT; ABS Australian National Accounts; ABS State Accounts; ABS Household Expenditure Survey (HES)
For more information on approach and methodology, contact research@opencorridor.org
DOI: 10.5281/zenodo.10099457
title: Environmental Footprints of Greater Melbourne

description: Environmental footprints of Greater Melbourne, 2021
Primary data sources: EXIOBASE MR EE SUT/IOT; ABS Australian National Accounts; ABS State Accounts; ABS Household Expenditure Survey (HES)
For more information on approach and methodology, contact research@opencorridor.org
DOI: 10.6084/m9.figshare.24629718
title: Updated: Species-Specific Biomolecular FTIR Raw Data, analysed in: Rebecca Duncan, Daniel Nielsen, Janne E. Søreide, Øystein Varpe, Mark J. Tobin, Vanessa Pitusi, Katherina Petrou, 2023. Biomolecular profiles of Arctic sea ice diatoms highlight the role of under-ice light in cellular energy allocation

description: Species specific biomolecular content of five selected diatom taxa taken from landfast ice in Svalbard, determined by FTIR microspectroscopy at the Australian Synchrotron, Melbourne.
DOI: 10.6084/m9.figshare.24629718.v1
title: Updated: Species-Specific Biomolecular FTIR Raw Data, analysed in: Rebecca Duncan, Daniel Nielsen, Janne E. Søreide, Øystein Varpe, Mark J. Tobin, Vanessa Pitusi, Katherina Petrou, 2023. Biomolecular profiles of Arctic sea ice diatoms highlight the role of under-ice light in cellular energy allocation

description: Species specific biomolecular content of five selected diatom taxa taken from landfast ice in Svalbard, determined by FTIR microspectroscopy at the Australian Synchrotron, Melbourne.
DOI: 10.25909/24197571.v1
title: Data for Kelp holdfast microclimates buffer invertebrate inhabitants from extreme temperatures

description: All data for the following publication: Perry, et al. (2023) Kelp holdfast microclimates buffer invertebrate inhabitants from extreme temperatures. Conservation Physiology.Please see the corresponding research publication for methodological details. The corresponding files for each section are as follows:Logger data: final_merged_data_method_modelCritical thermal limits: ctl dataRespiration measurements: snail correct rates, amphipod correct rates
DOI: 10.34683/sr337
title: StoneRounds Case: SR337
title: Foveal Hypoplasia

description: StoneRounds Case SR337 was diagnosed with Foveal Hypoplasia likely caused by mutations in the gene: PAX6.
DOI: 10.57967/hf/1381
title: roleplay_multiturn_chat_1k_zh_v0.1
DOI: 10.6084/m9.figshare.24615678
title: GSearch_database_nt_RefSeq_prob_hll

description: GSearch_database_nt_RefSeq_prob_hll. GSearch database for NCBI/RefSeq all genomes. Based on probminhash or setsketch
DOI: 10.6084/m9.figshare.24615678.v1
title: GSearch_database_nt_RefSeq_prob_hll

description: GSearch_database_nt_RefSeq_prob_hll. GSearch database for NCBI/RefSeq all genomes. Based on probminhash or setsketch
DOI: 10.6084/m9.figshare.23921238
title: The output files of MEANGS for ten cartilaginous and ray-finned fish species

description: The output files of MEANGS when assembling mitogenome of ten investigated fish species including <i>Chiloscyllium plagiosum</i>, <i>Okamejei kenojei</i>, <i>Sebastes schlegelii</i>, <i>Platycephalus </i>sp.1, <i>Lophius litulon</i>, <i>Engraulis japonicas</i>, <i>Scoliodon macrorhynchos</i>, <i>Takifugu rubripes</i>, <i>Acipenser ruthenus</i>, and <i>Megalops atlanticus</i>. In the compressed file, the second level folders are named with the '-n' parameter and the 'mito_cliped.fas' files are the final assemblies of tested species, according to the first level folder name. These three fas files with prefix 'Out_deep_detected_mito' are final assembly results when unused the circular detection module.
DOI: 10.6084/m9.figshare.23921238.v4
title: The output files of MEANGS when assembling mitogenome of three marine fish

description: The output files of MEANGS when assembling mitogenome of three marine fish species including the white-spotted bamboo shark (<i>Chiloscyllium plagiosum</i>), ocellate spot skate (<i>Okamejei kenojei</i>) and brown-spotted flathead (<i>Platycephalus </i>sp.1). In the compressed file, the second level folders are named with the '-n' parameter and the 'mito_cliped.fas' files are the final assemblies of three species, according to the first level folder name. These three fas files with prefix 'Out_deep_detected_mito' are final assembly results when unused the circular detection module.
DOI: 10.6084/m9.figshare.23921238.v5
title: The output files of MEANGS for ten cartilaginous and ray-finned fish species

description: The output files of MEANGS when assembling mitogenome of ten investigated fish species including <i>Chiloscyllium plagiosum</i>, <i>Okamejei kenojei</i>, <i>Sebastes schlegelii</i>, <i>Platycephalus </i>sp.1, <i>Lophius litulon</i>, <i>Engraulis japonicas</i>, <i>Scoliodon macrorhynchos</i>, <i>Takifugu rubripes</i>, <i>Acipenser ruthenus</i>, and <i>Megalops atlanticus</i>. In the compressed file, the second level folders are named with the '-n' parameter and the 'mito_cliped.fas' files are the final assemblies of tested species, according to the first level folder name. These three fas files with prefix 'Out_deep_detected_mito' are final assembly results when unused the circular detection module.
DOI: 10.26066/rds.1973697
title: Hydropower potential in the upper Indus basin under future hydro-climatology

description: The hydropower potential in the upper Indus basin under historical hydro-climatology was prepared using the Hydropower Potential Exploration (HyPE) model. Under historical hydro-climatology, the HyPE model was run to explore theoretical potential followed by technical, financial and sustainable potential under two types of hydropower development policy scenarios. The energy focus scenarios (Large/Medium/Mixed) explored the impact of different scales of hydropower development. Additionally, for sustainable potential, the geo-hazard risk representation scenarios (Risk-averse/Cost-based/Multi-hazard) evaluated three ways to represent geo-hazard risk in hydropower development policies. Furthermore, historical analysis quantified technical, financial and sustainable potential under full and remaining cases. This dataset was produced under WorkPackage 2 of the SustainIndus project.
DOI: 10.6084/m9.figshare.24630375
title: Dataset

description: Data to supplement the paper.
DOI: 10.6084/m9.figshare.24630375.v1
title: Dataset

description: Data to supplement the paper.
DOI: 10.6084/m9.figshare.24630274
title: Additional file 1 of “We usually see a lot of delay in terms of coming for or seeking care”: an expert consultation on COVID testing and care pathways in seven low- and middle-income countries

description: Additional file 1.
DOI: 10.6084/m9.figshare.24630274.v1
title: Additional file 1 of “We usually see a lot of delay in terms of coming for or seeking care”: an expert consultation on COVID testing and care pathways in seven low- and middle-income countries

description: Additional file 1.
DOI: 10.6084/m9.figshare.24603162
title: Items

description: Readme: Factorization Paper Experiment data & Analysis code<br>main.ipynb : a notebook which performs analysis on experiment data and draws probability plots in the paperfunctionality.py, MISDAC.py : code library of main.ipynb<br>Fact6Data/Fact6AtomImage.fig : Atom image of n=6 experimentFact6Data/FactD1.mat : Raw experiment data of 6 atomsFact6Data/FactDtoPlot.mat : Processed result of Fact6D1.mat by main.ipynb<br>Fact15Data/Fact15AtomImageLayerX.fig : Atom image of n=15 experiment for X=1,2,3 layersFact15Data/Fact15DX.mat : Raw experiment data of 24 atoms, X=1,2Fact15Data/Fact15DtoPlot.mat : Processed result of Fact15DX.mat by main.ipynb<br>Fact35Data/Fact35AtomImage.fig : Atom image of n=35 experimentFact35Data/Fact35DX.mat : Raw experiment data of 25 atoms, X=1,2, ..., 16Fact35Data/Fact35DtoPlot.mat: Processed result of Fact35DX.mat by main.ipynb<br>
DOI: 10.6084/m9.figshare.24630259
title: Additional file 1 of Identification of gene modules and hub genes associated with Colletotrichum siamense infection in mango using weighted gene co-expression network analysis

description: Additional file 1.
DOI: 10.6084/m9.figshare.24630259.v1
title: Additional file 1 of Identification of gene modules and hub genes associated with Colletotrichum siamense infection in mango using weighted gene co-expression network analysis

description: Additional file 1.
DOI: 10.6084/m9.figshare.24630546
title: Supplementary Material for: Long-term Clinical Outcomes of Optimizing Combination Therapy for Primary Pulmonary Mucosa-associated Lymphoid Tissue Lymphoma: A Retrospective Study

description: Introduction: Pulmonary mucosa-associated lymphoid tissue (MALT) lymphoma progresses with advancing disease stage. However, no standard treatment approach has been established. This single-center retrospective study evaluated clinical and radiological characteristics, treatment modalities, and long-term prognosis of pulmonary MALT lymphoma. Methods: The study included 42 patients diagnosed with pulmonary MALT lymphoma between October 2004 and July 2019. Primary therapeutic modalities were determined using modified Ann Arbor staging. Therapeutic response was evaluated via computed tomography and laboratory analyses every 6 months for 5 years. Radiological findings were categorized based on the Lugano classification as complete response (CR), partial response, stable disease (SD), or progressive disease. Results: Initial treatment included observation (n=2), surgical resection (n=6), or systemic chemotherapy (n=34). Patients treated surgically had localized disease and achieved initial and long-term CR. Of the 34 patients who underwent chemotherapy, 30 achieved CR, 2 achieved SD, and 2 died. Overall and progression-free survival (PFS) rates were 93.9% and 54.3%, respectively. Multivariate analysis indicated that PFS was lower in patients with modified Ann Arbor stage III-IV lymphoma and those who did not achieve CR. Conclusions: Optimized treatment based on anatomical location, pulmonary function, and disease stage can improve long-term survival in patients with pulmonary MALT lymphoma.
DOI: 10.6084/m9.figshare.24630546.v1
title: Supplementary Material for: Long-term Clinical Outcomes of Optimizing Combination Therapy for Primary Pulmonary Mucosa-associated Lymphoid Tissue Lymphoma: A Retrospective Study

description: Introduction: Pulmonary mucosa-associated lymphoid tissue (MALT) lymphoma progresses with advancing disease stage. However, no standard treatment approach has been established. This single-center retrospective study evaluated clinical and radiological characteristics, treatment modalities, and long-term prognosis of pulmonary MALT lymphoma. Methods: The study included 42 patients diagnosed with pulmonary MALT lymphoma between October 2004 and July 2019. Primary therapeutic modalities were determined using modified Ann Arbor staging. Therapeutic response was evaluated via computed tomography and laboratory analyses every 6 months for 5 years. Radiological findings were categorized based on the Lugano classification as complete response (CR), partial response, stable disease (SD), or progressive disease. Results: Initial treatment included observation (n=2), surgical resection (n=6), or systemic chemotherapy (n=34). Patients treated surgically had localized disease and achieved initial and long-term CR. Of the 34 patients who underwent chemotherapy, 30 achieved CR, 2 achieved SD, and 2 died. Overall and progression-free survival (PFS) rates were 93.9% and 54.3%, respectively. Multivariate analysis indicated that PFS was lower in patients with modified Ann Arbor stage III-IV lymphoma and those who did not achieve CR. Conclusions: Optimized treatment based on anatomical location, pulmonary function, and disease stage can improve long-term survival in patients with pulmonary MALT lymphoma.
DOI: 10.6084/m9.figshare.24630552
title: Supplementary Material for: Long-term Clinical Outcomes of Optimizing Combination Therapy for Primary Pulmonary Mucosa-associated Lymphoid Tissue Lymphoma: A Retrospective Study

description: Introduction: Pulmonary mucosa-associated lymphoid tissue (MALT) lymphoma progresses with advancing disease stage. However, no standard treatment approach has been established. This single-center retrospective study evaluated clinical and radiological characteristics, treatment modalities, and long-term prognosis of pulmonary MALT lymphoma. Methods: The study included 42 patients diagnosed with pulmonary MALT lymphoma between October 2004 and July 2019. Primary therapeutic modalities were determined using modified Ann Arbor staging. Therapeutic response was evaluated via computed tomography and laboratory analyses every 6 months for 5 years. Radiological findings were categorized based on the Lugano classification as complete response (CR), partial response, stable disease (SD), or progressive disease. Results: Initial treatment included observation (n=2), surgical resection (n=6), or systemic chemotherapy (n=34). Patients treated surgically had localized disease and achieved initial and long-term CR. Of the 34 patients who underwent chemotherapy, 30 achieved CR, 2 achieved SD, and 2 died. Overall and progression-free survival (PFS) rates were 93.9% and 54.3%, respectively. Multivariate analysis indicated that PFS was lower in patients with modified Ann Arbor stage III-IV lymphoma and those who did not achieve CR. Conclusions: Optimized treatment based on anatomical location, pulmonary function, and disease stage can improve long-term survival in patients with pulmonary MALT lymphoma.
DOI: 10.6084/m9.figshare.24630552.v1
title: Supplementary Material for: Long-term Clinical Outcomes of Optimizing Combination Therapy for Primary Pulmonary Mucosa-associated Lymphoid Tissue Lymphoma: A Retrospective Study

description: Introduction: Pulmonary mucosa-associated lymphoid tissue (MALT) lymphoma progresses with advancing disease stage. However, no standard treatment approach has been established. This single-center retrospective study evaluated clinical and radiological characteristics, treatment modalities, and long-term prognosis of pulmonary MALT lymphoma. Methods: The study included 42 patients diagnosed with pulmonary MALT lymphoma between October 2004 and July 2019. Primary therapeutic modalities were determined using modified Ann Arbor staging. Therapeutic response was evaluated via computed tomography and laboratory analyses every 6 months for 5 years. Radiological findings were categorized based on the Lugano classification as complete response (CR), partial response, stable disease (SD), or progressive disease. Results: Initial treatment included observation (n=2), surgical resection (n=6), or systemic chemotherapy (n=34). Patients treated surgically had localized disease and achieved initial and long-term CR. Of the 34 patients who underwent chemotherapy, 30 achieved CR, 2 achieved SD, and 2 died. Overall and progression-free survival (PFS) rates were 93.9% and 54.3%, respectively. Multivariate analysis indicated that PFS was lower in patients with modified Ann Arbor stage III-IV lymphoma and those who did not achieve CR. Conclusions: Optimized treatment based on anatomical location, pulmonary function, and disease stage can improve long-term survival in patients with pulmonary MALT lymphoma.
DOI: 10.6084/m9.figshare.24630570
title: Supplementary Material for: Long-term Clinical Outcomes of Optimizing Combination Therapy for Primary Pulmonary Mucosa-associated Lymphoid Tissue Lymphoma: A Retrospective Study

description: Introduction: Pulmonary mucosa-associated lymphoid tissue (MALT) lymphoma progresses with advancing disease stage. However, no standard treatment approach has been established. This single-center retrospective study evaluated clinical and radiological characteristics, treatment modalities, and long-term prognosis of pulmonary MALT lymphoma. Methods: The study included 42 patients diagnosed with pulmonary MALT lymphoma between October 2004 and July 2019. Primary therapeutic modalities were determined using modified Ann Arbor staging. Therapeutic response was evaluated via computed tomography and laboratory analyses every 6 months for 5 years. Radiological findings were categorized based on the Lugano classification as complete response (CR), partial response, stable disease (SD), or progressive disease. Results: Initial treatment included observation (n=2), surgical resection (n=6), or systemic chemotherapy (n=34). Patients treated surgically had localized disease and achieved initial and long-term CR. Of the 34 patients who underwent chemotherapy, 30 achieved CR, 2 achieved SD, and 2 died. Overall and progression-free survival (PFS) rates were 93.9% and 54.3%, respectively. Multivariate analysis indicated that PFS was lower in patients with modified Ann Arbor stage III-IV lymphoma and those who did not achieve CR. Conclusions: Optimized treatment based on anatomical location, pulmonary function, and disease stage can improve long-term survival in patients with pulmonary MALT lymphoma.
DOI: 10.6084/m9.figshare.24630570.v1
title: Supplementary Material for: Long-term Clinical Outcomes of Optimizing Combination Therapy for Primary Pulmonary Mucosa-associated Lymphoid Tissue Lymphoma: A Retrospective Study

description: Introduction: Pulmonary mucosa-associated lymphoid tissue (MALT) lymphoma progresses with advancing disease stage. However, no standard treatment approach has been established. This single-center retrospective study evaluated clinical and radiological characteristics, treatment modalities, and long-term prognosis of pulmonary MALT lymphoma. Methods: The study included 42 patients diagnosed with pulmonary MALT lymphoma between October 2004 and July 2019. Primary therapeutic modalities were determined using modified Ann Arbor staging. Therapeutic response was evaluated via computed tomography and laboratory analyses every 6 months for 5 years. Radiological findings were categorized based on the Lugano classification as complete response (CR), partial response, stable disease (SD), or progressive disease. Results: Initial treatment included observation (n=2), surgical resection (n=6), or systemic chemotherapy (n=34). Patients treated surgically had localized disease and achieved initial and long-term CR. Of the 34 patients who underwent chemotherapy, 30 achieved CR, 2 achieved SD, and 2 died. Overall and progression-free survival (PFS) rates were 93.9% and 54.3%, respectively. Multivariate analysis indicated that PFS was lower in patients with modified Ann Arbor stage III-IV lymphoma and those who did not achieve CR. Conclusions: Optimized treatment based on anatomical location, pulmonary function, and disease stage can improve long-term survival in patients with pulmonary MALT lymphoma.