cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/112101
title: Multiplexed data collected during research cruise KN214 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502978
title: Additional file 1: of Before it disappeared: ethnobotanical study of fleagrass (Adenosma buchneroides), a traditional aromatic plant used by the Akha people

description: Interview information about Fleagrass. (XLS 69â kb)
DOI: 10.6084/m9.figshare.7502978.v1
title: Additional file 1: of Before it disappeared: ethnobotanical study of fleagrass (Adenosma buchneroides), a traditional aromatic plant used by the Akha people

description: Interview information about Fleagrass. (XLS 69â kb)
DOI: 10.7284/112098
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN214 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112099
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise KN214 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113445
title: Fluorometer data collected during research cruise KN214 using a WET Labs WETStar instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502948
title: MOESM4 of RNA sequencing of kidney and liver transcriptome obtained from wild cynomolgus macaque (Macaca fascicularis) originating from Peninsular Malaysia

description: Additional file 4. Tissue-specific genes (sorted from highest to lowest Normalised mean expression value). A list of tissue-specific genes generated from a Venn diagram comparison of expressed genes (normalised expression valueâ &gt;â 1) in kidney, liver, lymph node, spleen, and thymus tissues.
DOI: 10.6084/m9.figshare.7502942
title: MOESM3 of RNA sequencing of kidney and liver transcriptome obtained from wild cynomolgus macaque (Macaca fascicularis) originating from Peninsular Malaysia

description: Additional file 3. List of differentially expressed genes from kidney vs. liver comparison. Differentially expressed genes in kidney and liver tissues called from the empirical differential gene expression analysis in CLC Genomics Workbench. Listed are the genes with their corresponding fold change values, together with their gene ontology and pathway annotations.
DOI: 10.6084/m9.figshare.7502948.v1
title: MOESM4 of RNA sequencing of kidney and liver transcriptome obtained from wild cynomolgus macaque (Macaca fascicularis) originating from Peninsular Malaysia

description: Additional file 4. Tissue-specific genes (sorted from highest to lowest Normalised mean expression value). A list of tissue-specific genes generated from a Venn diagram comparison of expressed genes (normalised expression valueâ &gt;â 1) in kidney, liver, lymph node, spleen, and thymus tissues.
DOI: 10.7284/112103
title: GNSS (Global Navigation Satellite System) data collected during research cruise KN214 using a C&C C-Nav 2000 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502939
title: MOESM2 of RNA sequencing of kidney and liver transcriptome obtained from wild cynomolgus macaque (Macaca fascicularis) originating from Peninsular Malaysia

description: Additional file 2. Macaca fascicularis kidney and liver sequence reads trimming and reference guided assembly summary statistics. Summary of Macaca fascicularis kidney and liver sequence reads quality trimming and reference guided assembly.
DOI: 10.6084/m9.figshare.7502936
title: MOESM1 of RNA sequencing of kidney and liver transcriptome obtained from wild cynomolgus macaque (Macaca fascicularis) originating from Peninsular Malaysia

description: Additional file 1. Selected genes for NanoString nCounter XT Gene Expression assay validation of RNA-Seq gene expression profiles. Table lists selected genes utilised for the validation of RNA-Seq gene expression profiles via NanoString nCounter XT Gene Expression assay and their respective probes nucleotide sequences.
DOI: 10.6084/m9.figshare.7502936.v1
title: MOESM1 of RNA sequencing of kidney and liver transcriptome obtained from wild cynomolgus macaque (Macaca fascicularis) originating from Peninsular Malaysia

description: Additional file 1. Selected genes for NanoString nCounter XT Gene Expression assay validation of RNA-Seq gene expression profiles. Table lists selected genes utilised for the validation of RNA-Seq gene expression profiles via NanoString nCounter XT Gene Expression assay and their respective probes nucleotide sequences.
DOI: 10.6084/m9.figshare.7502939.v1
title: MOESM2 of RNA sequencing of kidney and liver transcriptome obtained from wild cynomolgus macaque (Macaca fascicularis) originating from Peninsular Malaysia

description: Additional file 2. Macaca fascicularis kidney and liver sequence reads trimming and reference guided assembly summary statistics. Summary of Macaca fascicularis kidney and liver sequence reads quality trimming and reference guided assembly.
DOI: 10.6084/m9.figshare.7502942.v1
title: MOESM3 of RNA sequencing of kidney and liver transcriptome obtained from wild cynomolgus macaque (Macaca fascicularis) originating from Peninsular Malaysia

description: Additional file 3. List of differentially expressed genes from kidney vs. liver comparison. Differentially expressed genes in kidney and liver tissues called from the empirical differential gene expression analysis in CLC Genomics Workbench. Listed are the genes with their corresponding fold change values, together with their gene ontology and pathway annotations.
DOI: 10.7284/113444
title: Meteorological Station data collected during research cruise KN214 using a Vaisala WXT520 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113447
title: Meteorological Station data collected during research cruise KN214 using a Vaisala WXT520 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112102
title: Multibeam Echosounder data collected during research cruise KN214 using a SeaBeam 3012-P1 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113448
title: Radiometer data collected during research cruise KN214 using a Eppley PIR instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113449
title: Radiometer data collected during research cruise KN214 using a Eppley PSP instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113450
title: Water Temperature data collected during research cruise KN214 using a Sea-Bird SBE-48 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113446
title: TSG (Thermosalinograph) data collected during research cruise KN214 using a Sea-Bird SBE-45 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502873
title: Additional file 4: of Acceptability of screening for mental health difficulties in primary schools: a survey of UK parents

description: Table S1. Means and frequencies of responses to Likert-type items. (XLSX 10 kb)
DOI: 10.7284/114372
title: Multiplexed data collected during research cruise KN216-01 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502873.v1
title: Additional file 4: of Acceptability of screening for mental health difficulties in primary schools: a survey of UK parents

description: Table S1. Means and frequencies of responses to Likert-type items. (XLSX 10 kb)
DOI: 10.7284/114370
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN216-01 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/114374
title: Fluorometer data collected during research cruise KN216-01 using a WET Labs WETStar instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/114373
title: GNSS (Global Navigation Satellite System) data collected during research cruise KN216-01 using a C&C C-Nav 2000 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502834
title: Additional file 3: of GSAE: an autoencoder with embedded gene-set nodes for genomics functional characterization

description: Table S2. Top 20 gene sets of the six prognostic significant supersets in LUAD survival analysis. (XLSX 15 kb)
DOI: 10.7284/114371
title: Meteorological Station data collected during research cruise KN216-01 using a Vaisala WXT520 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502834.v1
title: Additional file 3: of GSAE: an autoencoder with embedded gene-set nodes for genomics functional characterization

description: Table S2. Top 20 gene sets of the six prognostic significant supersets in LUAD survival analysis. (XLSX 15 kb)
DOI: 10.7284/114376
title: Meteorological Station data collected during research cruise KN216-01 using a Vaisala WXT520 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502822
title: Additional file 1: of GSAE: an autoencoder with embedded gene-set nodes for genomics functional characterization

description: Table S1. Top high impact gene sets of the four up-supersets and three down-supersets in the BRCA tumor subtype analysis. The highly overlapped collections of a gene set were determined by MSigDB (in the compute overlaps section). (XLSX 27 kb)
DOI: 10.6084/m9.figshare.7502822.v1
title: Additional file 1: of GSAE: an autoencoder with embedded gene-set nodes for genomics functional characterization

description: Table S1. Top high impact gene sets of the four up-supersets and three down-supersets in the BRCA tumor subtype analysis. The highly overlapped collections of a gene set were determined by MSigDB (in the compute overlaps section). (XLSX 27 kb)
DOI: 10.7284/114377
title: Radiometer data collected during research cruise KN216-01 using a Eppley PIR instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/114378
title: Radiometer data collected during research cruise KN216-01 using a Eppley PSP instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/114379
title: Water Temperature data collected during research cruise KN216-01 using a Sea-Bird SBE-48 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/114375
title: TSG (Thermosalinograph) data collected during research cruise KN216-01 using a Sea-Bird SBE-45 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/114383
title: Multiplexed data collected during research cruise KN216-02 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502771
title: Additional file 4: of MeDEStrand: an improved method to infer genome-wide absolute methylation levels from DNA enrichment data

description: Table S3. Spearman correlation coefficient between the inferred bin methylation level and the RRBS data, bin size: 100â bp. (XLSM 38 kb)
DOI: 10.7284/114380
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN216-02 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502762
title: Additional file 3: of MeDEStrand: an improved method to infer genome-wide absolute methylation levels from DNA enrichment data

description: Table S2. Pearson correlation coefficient between the inferred bin methylation level and the RRBS data, bin size: 100â bp. (XLSM 38 kb)
DOI: 10.6084/m9.figshare.7502771.v1
title: Additional file 4: of MeDEStrand: an improved method to infer genome-wide absolute methylation levels from DNA enrichment data

description: Table S3. Spearman correlation coefficient between the inferred bin methylation level and the RRBS data, bin size: 100â bp. (XLSM 38 kb)
DOI: 10.6084/m9.figshare.7502759
title: Additional file 2: of MeDEStrand: an improved method to infer genome-wide absolute methylation levels from DNA enrichment data

description: Table S1. Pearson correlation coefficient of bin methylation level for the positive and negative DNA strand at various bin size (bp). Cell line: GM12878, Data: RRBS. (XLSM 32 kb)
DOI: 10.6084/m9.figshare.7502762.v1
title: Additional file 3: of MeDEStrand: an improved method to infer genome-wide absolute methylation levels from DNA enrichment data

description: Table S2. Pearson correlation coefficient between the inferred bin methylation level and the RRBS data, bin size: 100â bp. (XLSM 38 kb)
DOI: 10.7284/114381
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise KN216-02 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502759.v1
title: Additional file 2: of MeDEStrand: an improved method to infer genome-wide absolute methylation levels from DNA enrichment data

description: Table S1. Pearson correlation coefficient of bin methylation level for the positive and negative DNA strand at various bin size (bp). Cell line: GM12878, Data: RRBS. (XLSM 32 kb)
DOI: 10.7284/114384
title: Expendable Probe data collected during research cruise KN216-02 using a Sippican MK21 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/114387
title: Fluorometer data collected during research cruise KN216-02 using a WET Labs WETStar instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502735
title: MOESM1 of Amphotericin B deoxycholate for relapse visceral leishmaniasis in Bangladesh: a cross-sectional study

description: Additional file 1. Anonymous patient data. The dataset supporting the conclusions of this article.
DOI: 10.6084/m9.figshare.7502735.v1
title: MOESM1 of Amphotericin B deoxycholate for relapse visceral leishmaniasis in Bangladesh: a cross-sectional study

description: Additional file 1. Anonymous patient data. The dataset supporting the conclusions of this article.
DOI: 10.6084/m9.figshare.7502702
title: 1. Md.Imdadul Haque_ SPSS_Data set.sav 2. Md. Imdadul Haque_Qualitative data

description: It was a cross-sectional study conducted in urban areas in Bangladesh. Data set herein contain both SPSS data and the raw data produced from In-depth Interviews.<br>
DOI: 10.7284/114386
title: GNSS (Global Navigation Satellite System) data collected during research cruise KN216-02 using a C&C C-Nav 2000 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502423
title: Streblidae abundances on Carollia perspicillata

description: Table with abundances of three Streblidae species on bat individuals of the species <i>Carollia perspicillata</i>. These data was used for a publication on competition among parasite species, patterns of co-ocurrence and density compensation. The table also has some basic information on host characteristics such as weight, sex and site of capture. <br>
DOI: 10.6084/m9.figshare.7502702.v1
title: 1. Md.Imdadul Haque_ SPSS_Data set.sav 2. Md. Imdadul Haque_Qualitative data

description: It was a cross-sectional study conducted in urban areas in Bangladesh. Data set herein contain both SPSS data and the raw data produced from In-depth Interviews.<br>
DOI: 10.7284/114382
title: Meteorological Station data collected during research cruise KN216-02 using a Vaisala WXT520 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.17608/k6.auckland.7502384
title: Sex-dependent peripheral administration of alpha-MSH or desacetyl-alpha-MSH induced Pomc tm1/tm1 mouse body weight loss

description: Supplementary Figure for manuscriptSupplementary Tables for manuscript<br>
DOI: 10.6084/m9.figshare.7502423.v1
title: Streblidae abundances on Carollia perspicillata

description: Table with abundances of three Streblidae species on bat individuals of the species <i>Carollia perspicillata</i>. These data was used for a publication on competition among parasite species, patterns of co-ocurrence and density compensation. The table also has some basic information on host characteristics such as weight, sex and site of capture. <br>
DOI: 10.6084/m9.figshare.7502423.v3
title: Streblidae abundances on Carollia perspicillata

description: Table with abundances of three Streblidae species on bat individuals of the species <i>Carollia perspicillata</i>. These data was used for a publication on competition among parasite species, patterns of co-ocurrence and density compensation. The table also has some basic information on host characteristics such as weight, sex and site of capture. <br>
DOI: 10.7284/114389
title: Meteorological Station data collected during research cruise KN216-02 using a Vaisala WXT520 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.17608/k6.auckland.7502384.v1
title: Sex-dependent peripheral administration of alpha-MSH or desacetyl-alpha-MSH induced Pomc tm1/tm1 mouse body weight loss

description: Supplementary Figure for manuscriptSupplementary Tables for manuscript<br>
DOI: 10.6084/m9.figshare.7502423.v2
title: Streblidae abundances on Carollia perspicillata

description: Table with abundances of three Streblidae species on bat individuals of the species <i>Carollia perspicillata</i>. These data was used for a publication on competition among parasite species, patterns of co-ocurrence and density compensation. The table also has some basic information on host characteristics such as weight, sex and site of capture. <br>
DOI: 10.7284/114390
title: Radiometer data collected during research cruise KN216-02 using a Eppley PIR instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/114391
title: Radiometer data collected during research cruise KN216-02 using a Eppley PSP instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/114385
title: Singlebeam Echosounder data collected during research cruise KN216-02 using a Knudsen 320B/R instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/114392
title: Water Temperature data collected during research cruise KN216-02 using a Sea-Bird SBE-48 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502294
title: Error on Z coordinate with voxel size 1 mm

description: Localization error on the <i>z</i> coordinate for a voxel size set to 1 mm (side of a cube). Horizontal axis of each subplot is the simulated <i>x</i> position of the inclusion and vertical axis is the simulated <i>y</i> position. Rows are for different <i>z </i>coordinate of the inclusion while columns for different . Colors show an error of -10 mm (blue) to +10 mm (red).
DOI: 10.7284/114388
title: TSG (Thermosalinograph) data collected during research cruise KN216-02 using a Sea-Bird SBE-45 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/114395
title: Multiplexed data collected during research cruise KN216-03 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502264
title: PPRV outbreak case mapping

description: Data of confirmed and unconfirmed willdife cases during PPRV outbreak in Mongolia 2016-2017
DOI: 10.6084/m9.figshare.7502285.v1
title: Climate and synchrony with conspecifics determine the effects of flowering phenology on reproductive success in <i>Silene acaulis</i>

description: Changes in flowering phenology resulting from climate change could impact individual plant fitness and population viability. Flowering phenology can mediate plant reproductive success in several ways, including pollinator interactions, flowering synchrony with conspecifics, and timing of suitable abiotic conditions. We explored factors that control phenology and reproductive success for an alpine cushion plant, <i>Silene acaulis</i>, across two years and four sites, totaling 1,123 plants, in Colorado, USA. We investigated relationships between flowering time, flowering synchrony, and reproductive success with local abiotic conditions and pollinator behavior. Mean flowering phenology was strongly correlated with the timing of snowmelt across sites and years. Relative to mean flowering times, earlier flowering plants generally produced more flowers and experienced greater soil moisture during flowering but reduced synchrony with conspecifics. Fruit set tended to increase with greater soil moisture, synchrony during flowering, and earlier flowering times. Pollinator visitation increased with local <i>Silene</i> flower density. Earlier snowmelt and drier conditions later in the season favor earlier flowering, but these effects are partially counteracted by the positive effects of synchrony, perhaps because of changes in pollinator visitation. Overall, while both biotic and abiotic effects influence reproductive success, late-season drought may outweigh the benefits of flowering synchrony to increasingly favor earlier flowering.
DOI: 10.7284/114393
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN216-03 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7502264.v1
title: PPRV outbreak case mapping

description: Data of confirmed and unconfirmed willdife cases during PPRV outbreak in Mongolia 2016-2017