cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7025858
title: Twelve years of low nutrient input stimulates growth of trees and dwarf shrubs in the treeline ecotone

description: Dataset used for JoE article<br>fert = NPK-Fertilizer treatment (0 = control, 15 = 15 kg N/ha/year, 30 = 30 kg N/ha/year)<br>For further information, see the ReadMe.txt file and the original research article "Twelve years of low nutrient input stimulates growth of trees and dwarf shrubs in the treeline ecotone" and its Supporting Information.<br><br>
DOI: 10.6084/m9.figshare.7025858.v1
title: Twelve years of low nutrient input stimulates growth of trees and dwarf shrubs in the treeline ecotone

description: Dataset used for JoE article<br>fert = NPK-Fertilizer treatment (0 = control, 15 = 15 kg N/ha/year, 30 = 30 kg N/ha/year)<br>For further information, see the ReadMe.txt file and the original research article "Twelve years of low nutrient input stimulates growth of trees and dwarf shrubs in the treeline ecotone" and its Supporting Information.<br><br>
DOI: 10.6084/m9.figshare.7025828
title: Large $\chi^{\Delta}$ 1D gradient-flow/sharp-interface comparison (Scenario 2 full-set)

description: Large $\chi^{\Delta}$ 1D gradient-flow/sharp-interface comparison
DOI: 10.6084/m9.figshare.7025828.v1
title: Large $\chi^{\Delta}$ 1D gradient-flow/sharp-interface comparison (Scenario 2 full-set)

description: Large $\chi^{\Delta}$ 1D gradient-flow/sharp-interface comparison
DOI: 10.6084/m9.figshare.7025723
title: Small $\chi^{\Delta}$ 1D gradient-flow/sharp-interface comparison (Scenario 1 full-set)

description: Small $\chi^{\Delta}$ 1D gradient-flow/sharp-interface comparison
DOI: 10.6084/m9.figshare.7025723.v1
title: Small $\chi^{\Delta}$ 1D gradient-flow/sharp-interface comparison (Scenario 1 full-set)

description: Small $\chi^{\Delta}$ 1D gradient-flow/sharp-interface comparison
DOI: 10.6084/m9.figshare.7025621
title: Effect of regularisation parameter on 3-phase end-state 1D morphologies

description: The effect of varying the regularisation parameter $\mu$ in a 3-phase phase field model for diblock copolymer evolution on the end-state morphology.
DOI: 10.6084/m9.figshare.7025621.v1
title: exp_group_run_222.zip

description: The effect of varying the regularisation parameter $\mu$ in a 3-phase phase field model for diblock copolymer evolution.
DOI: 10.6084/m9.figshare.7025621.v3
title: Effect of regularisation parameter on 3-phase end-state 1D morphologies

description: The effect of varying the regularisation parameter $\mu$ in a 3-phase phase field model for diblock copolymer evolution on the end-state morphology.
DOI: 10.6084/m9.figshare.7025621.v2
title: Effect of regularisation parameter on end-state 1D morphologies

description: The effect of varying the regularisation parameter $\mu$ in a 3-phase phase field model for diblock copolymer evolution on the end-state morphology.
DOI: 10.17637/rh.7023308
title: post-cutting-betacam-team4-medium.mp4

description: This footage was filmed in March 2018 at Royal Holloway, University of London in Egham, United Kingdom.<br>A group of veteran television videotape engineers was reunited with obsolete editing equipment last used in the 1980s, 1990s and early 2000s. The editors’ working practices and memories were recorded using multiple digital video cameras and wireless microphones.<br>This video is part of a series which explores how different technologies were using to edit videotape for television broadcast.<br>ADAPT (2013-8) is a European Research Council project at Royal Holloway University of London. The project studies the history of technologies in television, focussing on their everyday use in production activities.<br>ADAPT examines what technologies were adopted and why; how they worked; and how people worked with them. As well as publishing written accounts, the project carries out 'simulations' that reunite retired equipment with the people who used to use it.<br>Participants in these simulations explain how each machine worked and how different machines worked together as an 'array'; how they adapted the machines; and how they worked together as teams within the overall production process.<br>http://www.adaptTVhistory.org.uk<br>https://doi.org/10.17637/rh.c.3925603.v1
DOI: 10.6084/m9.figshare.7023125
title: Meadows_Biomass_Lethaia Data.pdf

description: Meadows, CA, 2018. Estimating fossil biomass from skeletal mass in marine invertebrates. Lethaia, in press.<br>Data used to generate figures in above manuscript<br>
DOI: 10.6084/m9.figshare.7023125.v1
title: Meadows_Biomass_Lethaia Data.pdf

description: Meadows, CA, 2018. Estimating fossil biomass from skeletal mass in marine invertebrates. Lethaia, in press.<br>Data used to generate figures in above manuscript<br>
DOI: 10.6084/m9.figshare.7022648
title: spherical collision survey differentiated eos

description: spherical collision survey differentiated eos
DOI: 10.6084/m9.figshare.7022648.v1
title: spherical collision survey differentiated eos

description: spherical collision survey differentiated eos
DOI: 10.6084/m9.figshare.7022621
title: Casting light on Asgardarchaeota metabolism in a sunlit microoxic niche

description: This is a repository for data associated with the manuscript "Casting light on Asgardarchaeota metabolism in a sunlit microoxic niche". The folder contains sequences, alignments and phlyogenetic trees used for the construction of the figures.
DOI: 10.6084/m9.figshare.7022558
title: PYJAR phylogenetic trees

description: Phylogenetic tree of MRSA and S. Typhi used as an input for the development of rPinecone program. These trees were generated using the joint ancestral state reconstruction algorithm (PYJAR) program.
DOI: 10.6084/m9.figshare.7022495
title: wbc_combined_noDup_RPBM.graph.sort

description: H3K4me3 wbc
DOI: 10.6084/m9.figshare.7022495.v1
title: wbc_combined_noDup_RPBM.graph.sort

description: H3K4me3 wbc
DOI: 10.6084/m9.figshare.7022462
title: NeoFlow testing data from two CRC cell lines

description: Whole exome sequencing, RNA-Seq and proteomics for the two colon cancer cell lines: HCT15 and SW1222. These data were described in the following papers:<br> [1] Mouradov, D., Sloggett, C., Jorissen, R. N., Love, C. G., Li, S., Burgess, A. W., ... & O'Connor, L. (2014). Colorectal cancer cell lines are representative models of the main molecular subtypes of primary cancer. <i>Cancer research</i>, canres-0013. [2] Wang, J., Mouradov, D., Wang, X., Jorissen, R. N., Chambers, M. C., Zimmerman, L. J., ... & Leuchowius, K. J. (2017). Colorectal cancer cell line proteomes are representative of primary tumors and predict drug sensitivity. <i>Gastroenterology</i>, <i>153</i>(4), 1082-1095.<br>We thank Dr. Dmitri Mouradov, Dr. Oliver M. Sieber and Dr. Daniel C. Liebler for sharing these data.
DOI: 10.6084/m9.figshare.7022462.v1
title: NeoFlow testing data from two CRC cell lines

description: Whole exome sequencing, RNA-Seq and proteomics for the two colon cancer cell lines: HCT15 and SW1222. These data were described in the following papers:<br> [1] Mouradov, D., Sloggett, C., Jorissen, R. N., Love, C. G., Li, S., Burgess, A. W., ... & O'Connor, L. (2014). Colorectal cancer cell lines are representative models of the main molecular subtypes of primary cancer. <i>Cancer research</i>, canres-0013. [2] Wang, J., Mouradov, D., Wang, X., Jorissen, R. N., Chambers, M. C., Zimmerman, L. J., ... & Leuchowius, K. J. (2017). Colorectal cancer cell line proteomes are representative of primary tumors and predict drug sensitivity. <i>Gastroenterology</i>, <i>153</i>(4), 1082-1095.<br>We thank Dr. Dmitri Mouradov, Dr. Oliver M. Sieber and Dr. Daniel C. Liebler for sharing these data.
DOI: 10.6084/m9.figshare.7022378
title: wbc_combined_noDup_RPBM.graph.sort.gz

description: bedgraph file
DOI: 10.6084/m9.figshare.7022375
title: wbc_combined_noDup_RPBM.graph.sort.gz.tbi

description: bulk H3K4me3 bedgraph
DOI: 10.6084/m9.figshare.7022375.v1
title: wbc_combined_noDup_RPBM.graph.sort.gz.tbi

description: bulk H3K4me3 bedgraph
DOI: 10.6084/m9.figshare.7022378.v1
title: wbc_combined_noDup_RPBM.graph.sort.gz

description: bedgraph file
DOI: 10.6084/m9.figshare.7022273
title: Supplementary Tables 240818.xlsx

description: Meta data for datasets used into development of rPinecone
DOI: 10.6084/m9.figshare.7022273.v1
title: Supplementary Tables 240818.xlsx

description: Meta data for datasets used into development of rPinecone
DOI: 10.17028/rd.lboro.7022213
title: How can bibliometric and altmetric vendors improve? Messages from the end-user community. Dataset.

description: The results of a survey of bibliometric and altmetric end-users run between Feb-Mar 2018 inviting them to suggest ways in which suppliers of bibliometric and altmetric data might improve their services. There were 42 respondents and 149 data points. Data include tools regularly used by respondents, demographic data and the free-text comments. The data have been coded and analysed. The data have been written up at Gadd, E.A. & Rowlands, I. (2018) How can bibliometric and altmetric vendors improve? Messages from the end-user community. Insights Journal. [In Press]
DOI: 10.6084/m9.figshare.7022207.v1
title: Propagation of optical pulses using the forward model for the analytic signal: soliton-soliton collisions

description: The provided software package facilitates the numerical propagation of optical pulses using the forward model for the analytic signal (FMAS). The use-cases provided with the software implement different constellations of<br>soliton-soliton collisions (SSC).<br><br>
DOI: 10.6084/m9.figshare.7022153
title: rPinecone output tree files

description: Output tree files from rPinecone
DOI: 10.6084/m9.figshare.7022153.v1
title: rPinecone newick files

description: Newick files used in the development of rPinecone program
DOI: 10.6084/m9.figshare.7022144
title: CVME

description: ChemSKOS dump<br>
DOI: 10.6084/m9.figshare.7022144.v1
title: chemskos

description: ChemSKOS dump<br>
DOI: 10.6084/m9.figshare.7022039
title: Supplementary material for "Alterations in Protein Kinase A Substrate Specificity as a Potential Cause of Cushing's Syndrome

description: Supplementary material for "Alterations in Protein Kinase A Substrate Specificity as a Potential Cause of Cushing's Syndrome.This includes Supplementary methods and figures, supplementary datasets, uncropped western blots.<br>
DOI: 10.6084/m9.figshare.7022039.v1
title: Supplementary material for "Alterations in Protein Kinase A Substrate Specificity as Cause of Cushing's Syndrome

description: Supplementary material for "Alterations in Protein Kinase A Substrate Specificity as Cause of Cushing's Syndrome.This includes Supplementary methods and figures, supplementary dataset, uncropped western blots.<br>
DOI: 10.6084/m9.figshare.7022039.v2
title: Supplementary material for "Alterations in Protein Kinase A Substrate Specificity as a Potential Cause of Cushing's Syndrome

description: Supplementary material for "Alterations in Protein Kinase A Substrate Specificity as a Potential Cause of Cushing's Syndrome.This includes Supplementary methods and figures, supplementary datasets, uncropped western blots.<br>
DOI: 10.6084/m9.figshare.7021853
title: Ultrasonic bouts of a blind climbing rodent (<i>Typhlomys chapensis</i>): acoustic analysis

description: The peculiar acoustic structure of ultrasonic bouts of blind climbing rodents <i>Typhlomys</i> might provide insight on their potential function. We examined 1481 bouts consisting of 1-6 pulses; 49.7% of them were single-pulse bouts. Bout duration and inter-bout interval depended on the number of pulses per bout, whereas period from start of a previous bout to start of the next bout was constant (80.0±2.9 ms). Ultrasonic pulses (540 pulses measured in a subset of 234 bouts) were short (0.68±0.15 ms) sweeps with fundamental frequency slopes from 127.3±6.3 kHz to 64.1±4.6 kHz and peak frequency at 93.3±7.4 kHz, emitted within bouts with inter-pulse periods of 13.03±3.01 ms. Single pulses and start pulses of multi-pulse bouts were lower in frequency than other pulses of the bouts. In contrast, pulse duration was independent on pulse position within bout. Pulses of <i>Typhlomys</i> were reminiscent of echolocation calls of <i>Murina</i> and <i>Myotis</i> bats, but higher in frequency, much shorter, fainter, displayed a convex contour of frequency modulation and only the fundamental frequency band without harmonics and were organized in bouts, that is not characteristic for bat echolocation. Most probably, <i>Typhlomys</i> uses their ultrasonic pulses for call-based orientation during locomotion, including climbing and jumping among bush branches.
DOI: 10.5281/zenodo.4005737
title: Aligned DNA sequence matrix for phylogenetic analyses in the article "Three new species of frogs of the genus Pristimantis (Anura: Strabomantidae) with a redefinition of the P. lacrimosus species group"

description: Aligned DNA sequence matrix for phylogenetic analyses of the article "Three new species of frogs of the genus Pristimantis (Anura: Strabomantidae) with a redefinition of the P. lacrimosus species group". The matrix is in NEXUS format. Gene partitions are arranged as follows (tRNAs are included as part of larger adjacent genes): RAG1 codon position 1 = 1-625\3;<br> RAG1 codon position 2 = 2-626\3;<br> RAG1 codon position 3 = 3-627\3;<br> 12S rRNA = 628-1440;<br> 16S rRNA = 1441-3071;<br> ND1 codon position 1 = 3072-3972\3;<br> ND1 codon position 2 = 3073-3973\3;<br> ND1 codon position 3 = 3074-3974\3;
DOI: 10.6084/m9.figshare.7021838
title: Supplementary Material for: Effects of Long-Term Treatment with T-PEMF on Forearm Muscle Activation and Motor Function in Parkinson’s Disease

description: Bipolar pulsed electromagnetic stimulation applied to the brain (T-PEMF) is a non-pharmacological treatment which has been shown to stimulate nerve growth, attenuate nerve abnormalities, and improve microcirculation. We report on a 62-year-old, medically well-treated man with idiopathic Parkinson’s disease. He was treated with T-PEMF, 30 min per day for three 8-week periods separated by two 1-week breaks. The disease made his handwriting impossible to read mainly due to small letters and lack of fluency. Forearm EMG measured during standardized conditions showed an involuntary spiky EMG pattern with regular burst activity (on his left side) at baseline. The intervention normalized the handwriting and forearm EMG. The UPDRS-motor score decreased from 25 to 17, and UPDRS-II-handwriting decreased from a pre-intervention value of 3 to 0 after the intervention. Finally, the patient reported improved fine motor function, less muscle stiffness, less muscle cramps and tingling, and less fatigue during the day in response to the T-PEMF treatment. The improved handwriting lasted for approximately 3 months after the treatment. Our results should be considered as preliminary, and large-scale, controlled studies are recommended to elucidate the therapeutic potential of long-term treatment with T-PEMF.
DOI: 10.6084/m9.figshare.7021853.v2
title: Ultrasonic bouts of a blind climbing rodent (<i>Typhlomys chapensis</i>): acoustic analysis

description: The peculiar acoustic structure of ultrasonic bouts of blind climbing rodents <i>Typhlomys</i> might provide insight on their potential function. We examined 1481 bouts consisting of 1-6 pulses; 49.7% of them were single-pulse bouts. Bout duration and inter-bout interval depended on the number of pulses per bout, whereas period from start of a previous bout to start of the next bout was constant (80.0±2.9 ms). Ultrasonic pulses (540 pulses measured in a subset of 234 bouts) were short (0.68±0.15 ms) sweeps with fundamental frequency slopes from 127.3±6.3 kHz to 64.1±4.6 kHz and peak frequency at 93.3±7.4 kHz, emitted within bouts with inter-pulse periods of 13.03±3.01 ms. Single pulses and start pulses of multi-pulse bouts were lower in frequency than other pulses of the bouts. In contrast, pulse duration was independent on pulse position within bout. Pulses of <i>Typhlomys</i> were reminiscent of echolocation calls of <i>Murina</i> and <i>Myotis</i> bats, but higher in frequency, much shorter, fainter, displayed a convex contour of frequency modulation and only the fundamental frequency band without harmonics and were organized in bouts, that is not characteristic for bat echolocation. Most probably, <i>Typhlomys</i> uses their ultrasonic pulses for call-based orientation during locomotion, including climbing and jumping among bush branches.
DOI: 10.5281/zenodo.4005736
title: Aligned DNA sequence matrix for phylogenetic analyses in the article "Three new species of frogs of the genus Pristimantis (Anura: Strabomantidae) with a redefinition of the P. lacrimosus species group"

description: Aligned DNA sequence matrix for phylogenetic analyses of the article "Three new species of frogs of the genus Pristimantis (Anura: Strabomantidae) with a redefinition of the P. lacrimosus species group". The matrix is in NEXUS format. Gene partitions are arranged as follows (tRNAs are included as part of larger adjacent genes): RAG1 codon position 1 = 1-625\3;<br> RAG1 codon position 2 = 2-626\3;<br> RAG1 codon position 3 = 3-627\3;<br> 12S rRNA = 628-1440;<br> 16S rRNA = 1441-3071;<br> ND1 codon position 1 = 3072-3972\3;<br> ND1 codon position 2 = 3073-3973\3;<br> ND1 codon position 3 = 3074-3974\3;
DOI: 10.6084/m9.figshare.7021853.v1
title: Ultrasonic bouts of a blind climbing rodent (<i>Typhlomys chapensis</i>): acoustic analysis

description: The peculiar acoustic structure of ultrasonic bouts of blind climbing rodents <i>Typhlomys</i> might provide insight on their potential function. We examined 1481 bouts consisting of 1-6 pulses; 49.7% of them were single-pulse bouts. Bout duration and inter-bout interval depended on the number of pulses per bout, whereas period from start of a previous bout to start of the next bout was constant (80.0±2.9 ms). Ultrasonic pulses (540 pulses measured in a subset of 234 bouts) were short (0.68±0.15 ms) sweeps with fundamental frequency slopes from 127.3±6.3 kHz to 64.1±4.6 kHz and peak frequency at 93.3±7.4 kHz, emitted within bouts with inter-pulse periods of 13.03±3.01 ms. Single pulses and start pulses of multi-pulse bouts were lower in frequency than other pulses of the bouts. In contrast, pulse duration was independent on pulse position within bout. Pulses of <i>Typhlomys</i> were reminiscent of echolocation calls of <i>Murina</i> and <i>Myotis</i> bats, but higher in frequency, much shorter, fainter, displayed a convex contour of frequency modulation and only the fundamental frequency band without harmonics and were organized in bouts, that is not characteristic for bat echolocation. Most probably, <i>Typhlomys</i> uses their ultrasonic pulses for call-based orientation during locomotion, including climbing and jumping among bush branches.
DOI: 10.6084/m9.figshare.7021817
title: DATA.sav

description: A portion of oncological patients is heavily burdened by psychosocial stress. Doctors recommending or referring their patients to psycho-oncologists in the course of routine consultations can positively influence psycho-oncological care. 4,020 cancer patients (mean age 58 years; 51% women) were evaluated in a multicenter, cross-sectional study in Germany. Data was gathered about doctors’ referral practices, patients’ utilization of psycho-oncological care, and disease-related symptoms. We used the PHQ depression scale and the GAD anxiety scale to measure psychological burden. Descriptive data analysis was conducted on the basis of subgroup comparisons and multivariable analysis was done using binary logistical regression
DOI: 10.6084/m9.figshare.7021817.v1
title: DATA.sav

description: A portion of oncological patients is heavily burdened by psychosocial stress. Doctors recommending or referring their patients to psycho-oncologists in the course of routine consultations can positively influence psycho-oncological care. 4,020 cancer patients (mean age 58 years; 51% women) were evaluated in a multicenter, cross-sectional study in Germany. Data was gathered about doctors’ referral practices, patients’ utilization of psycho-oncological care, and disease-related symptoms. We used the PHQ depression scale and the GAD anxiety scale to measure psychological burden. Descriptive data analysis was conducted on the basis of subgroup comparisons and multivariable analysis was done using binary logistical regression
DOI: 10.6084/m9.figshare.7021802
title: Building evaluation together: a participative approach experimentation about evaluation in Emilia Romagna Region (Italy)

description: Abstract From 2010 in Emilia Romagna Region (Italy) the institutional authority promoted a negotiation process of elaboration and subsequent experimentation of a participative approach to evaluation of educational services for early childhood. The experimentation, that involved public and private services, is aimed at the implementation of a regional system of quality regulation in public governance. Key features of the evaluation approach are its formative function and social characterization, the creation of a collaborative relationship beetween educational services within the process of self-evaluation and external evaluation, the possibility of a partial contextualization of evaluation tools and procedures and the recursive nature of the process.
DOI: 10.6084/m9.figshare.7021802.v1
title: Building evaluation together: a participative approach experimentation about evaluation in Emilia Romagna Region (Italy)

description: Abstract From 2010 in Emilia Romagna Region (Italy) the institutional authority promoted a negotiation process of elaboration and subsequent experimentation of a participative approach to evaluation of educational services for early childhood. The experimentation, that involved public and private services, is aimed at the implementation of a regional system of quality regulation in public governance. Key features of the evaluation approach are its formative function and social characterization, the creation of a collaborative relationship beetween educational services within the process of self-evaluation and external evaluation, the possibility of a partial contextualization of evaluation tools and procedures and the recursive nature of the process.
DOI: 10.6084/m9.figshare.7021793
title: Nursing diagnoses of patients with kidney disease undergoing hemodialysis: a cross-sectional study

description: ABSTRACT Objective: to identify Nursing Diagnoses of 5th stage chronic kidney disease patients undergoing hemodialysis. Method: cross-sectional, descriptive and quantitative study carried out with 151 patients undergoing hemodialysis in a clinic specialized in nephrology from the Northwest of the Paraná State. Nursing Diagnoses were determined through Nanda-I in which had the percentage greater than 50%. The analysis used was the simple statistics. Results: 17 Nursing Diagnoses were identified, emphasizing the risks present in 100% of patients: risks for electrolyte imbalance; ineffective kidney perfusion; infection: vascular injuries, adverse response to the iodine-based contrast-enhanced and impaired urinary elimination. Conclusion: the main diagnoses listed reflect the more frequent risks that patients undergoing hemodialysis are exposed to. Being aware of these risks allows the nursing planning with early interventions, in order to prevent complications related to the disease and to promote best life conditions.