cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7302/z2765c7m
title: Raw Data - CCL2 enhances macrophage inflammatory responses via miR-9 mediated downregulation of the ERK1/2 phosphatase Dusp6

description: Raw data and analysis files for the figures corresponding to the manuscript submission entitled "CCL2 enhances macrophage inflammatory responses via miR-9 mediated downregulation of the ERK1/2 phosphatase Dusp6"
description: Mammalian cell culture, RNA isolation, qPCR, light microscopy, protein analysis, flow cytometry.
DOI: 10.7302/z2668bbc
title: Data Files Related to the Work "Real-Time Energy Disaggregation of a Distribution Feeder's Demand Using Online Learning"

description: This data set contains the relevant time series for constructing and testing electricity load models within the related paper. The files within are a '.mat' file that contains the data and a 'readme.txt' file detailing the contents of the data.
description: This data set corresponds to that used within "Real-Time Energy Disaggregation of a Distribution Feeder's Demand Using Online Learning", which is available on arXiv at (https://arxiv.org/abs/1701.04389). The contents were derived from original data from the Pecan Street Dataport, the Pacific Gas & Electric Company, and NOAA. Please refer to the paper for details on the data processing and relevant citations for the original data sources.
DOI: 10.7302/3srj-pr33
title: Dataset from analysis of a peat core from the Tielishahan peatland in the Xinjiang Altai Mountains, northwestern China

description: A high-resolution study of bulk properties in a peat sequence from the Xinjiang Altai Mountains of northwestern China, has allowed reconstruction of local variations in peat properties and peat C and N accumulation rates (CAR and NAR) during the Holocene. Analyses of peat bulk density, loss on ignition, and concentrations of TOC and TN and their elemental ratios and stable isotopic values suggest that changes in peat-forming vegetation types during different parts of this epoch are the major factors responsible for the variations of peat properties in this sequence. 
description: A core of peat was collected and its bulk density [BD], loss on ignition [LOI], and concentrations of Total Organic carbon [TOC] and Total Nitrogen {TN] and their elemental ratios and stable isotopic values were measured. Samples were taken at 2 cm intervals from the peat sequence for analysis of their bulk properties. A subset of 196 peat samples was used for measurements of BD and LOI, TOC and TN, and stable C and N isotope compositions. Samples for BD analysis were dried overnight at 105 °C and then combusted in a muffle furnace at 550 °C for 4h for determining the LOI values. Dried bulk samples were used for measuring TOC and TN concentrations using a CHN analyzer, and their C and N isotope compositions were determined using a MAT 253 Isotopic Ratio Mass Spectrometer.
DOI: 10.7302/rq69-4832
title: Bangime audio 2015 text 03 politics

description: transcription/translation to appear. 
description: audio recording on MacBook laptop
DOI: 10.7302/nhth-7f82
title: Dataset for "Weathering and paleosol formation in the 1.1Ga Keweenawan Rift"

description: Samples from a road cut section were analyzed. New paleosols were discovered. 
description: At a road cut section at Good Harbor Bay, Cook County, Minnesota, and along Cut Face Creek on the northeast part of the road section, 89 samples were taken with a hammer after removing about 10 centimeters of rock from the outcrop surface. Analysis was done with a PerkinElmer Optima 3300RL ICP-AES System and a PerkinElmer 5000 ICP-MS system for trace elements. A James Smith Model F Point Count machine for point count data and a Hitachi S3000 SEM for SEM and EDX images were also used. Dried samples were used for Munsell Soil colors. These analyses were done at Royal Holloway, University of London.
DOI: 10.7302/g5sh-x669
title: Father-inclusive perinatal parent education programs: A systematic review [Literature Search Files]

description: The dataset includes all citations considered for inclusion in the systematic review. The citations are accessible in Endnote (enlx), as well as through the primary citation export files from each database. The literature search strategies are included for reproducibility and transparency purposes. See the published methods for more information.
description: The data in this work originate from the literature searches of several citation databases, including MEDLINE (Ovid and PubMed), Embase (Elsevier), CINAHL (EBSCOhost), PsycINFO (EBSCOhost), and Cochrane Central Register of Controlled Trials (Wiley).
DOI: 10.7302/z24b2z7z
title: Effects of Age-Associated Regional Changes in Aortic Stiffness on Human Hemodynamics Revealed by Computational Modeling

description: Magnetic resonance angiography (MRA) of the aorta of a 30 yo healthy volunteer, segmented and discretized using the software CRIMSON (www.crimson.software).
Additionally, models corresponding to virtually-aged aortic geometries at ages: 40, 60, and 75.
description: Manual segmentation and lofting of aortic geometries corresponding to 30 (patient-specific), and 40, 60, and 75 year old (virtually-aged) subjects.
The lofted geometries result in a NURBS representation of the luminal boundary of the vessels. Then, a surface triangulation was performed to produce a vtk file for each specimen.
DOI: 10.7302/z2cr5rkd
title: Dataset of live-cell movies of single PolC-PAmCherry molecules in Bacillus subtilis cells with high and low fluorescent backgrounds.

description: This is the experimental data referenced in our manuscript entitled “SMALL-LABS: An algorithm for measuring single molecule intensity and position in the presence of obscuring backgrounds  .” These live-cell single-molecule imaging movies were used as a test of the SMALL-LABS single-molecule image analysis algorithm.

The dataset comprises two movies; each one is provided both as a .tif stack and as an .avi file. The movie called “low_bg” has a standard low background, and the movie called “high_bg” includes a high fluorescent background produced by an external 488-nm laser. 
description: We imaged Bacillus subtilis strains natively expressing the DNA polymerase PolC fused to the photoactivatable fluorescent protein PAmCherry as the sole source of PolC (strain JWS213). To produce the high background, a constant 15 W/cm2, 488-nm laser illumination generated a strong autofluorescent background in the cells
description: this background was further complicated by its slow decay over time. By stochastically switching a small subset (1 – 3 molecules per cell) of the PolC-PAmCherry molecules into a fluorescent state at a time (in a single-particle tracking/PALM experiment), we visualized the dynamics of single PolC-PAmCherry molecules in high-background cells and single PolC-PAmCherry molecules in low-background cells.
DOI: 10.7302/vrvf-hg86
title: CT Data of UMMP VP 81821, Cantius mckennai right distal tibia

description: Reconstructed CT slices for a right distal tibia of Cantius mckennai (University of Michigan Museum of Paleontology catalog number UMMP VP 81821), as a series of TIFF images. Raw projections are not included in this dataset.
description: Specimen UMMP VP 81821 was scanned with a Nikon XT H 225ST μCT system housed in the Department of Earth and Environmental Sciences at the University of Michigan. Scans were collected with the following settings: energy settings, 110 kV, 80 µA
description: source to object distance, 56.474880 mm
description: scanned with 1570 projections
description: voxel size, x = y = z = 0.020443 mm
description: slice dimension (in pixels),  x = 445, y = 454
description: number of slices, 771 16-bit TIFF images. Additional metadata can be found in the xtek and vgi files.
DOI: 10.7302/z2028ps3
title: Student Writing Eportfolio: "Adrienne's" Gateway

description: This eportfolio was created for the Gateway course of the Sweetland Minor in Writing to provide an opportunity for students to reflect on their growing identities as writers, as captured in their text-based and multimodal compositions produced over the Gateway semester. The title of the work contains the pseudonym created for the study while the creator field lists the student's given name to allow proper attribution for their work. The eportfolio is collected here as an artifact in the Sweetland Writing Development Study, which has been published as Developing Writers in Higher Education: A Longitudinal Study (University of Michigan Press, 2019). To learn more about this study, please see the epublication: https://doi.org/10.3998/mpub.10079890), and to learn more about the Minor in Writing program and the eportfolio prompts, please see Appendix 2a (https://doi.org/10.3998/mpub.10079890.cmp.1) to the publication.
description: This link will download a zipped folder of files created with SiteSucker, “a Macintosh application that automatically downloads websites from the Internet. It does this by asynchronously copying the site's webpages, images, PDFs, style sheets, and other files to your local hard drive, duplicating the site's directory structure” (SiteSucker Manual: https://ricks-apps.com/osx/sitesucker/archive/2.x/2.6.x/2.6/manuals/en/pgs/Overview.html]). To open the eportfolio website compressed in this zipped folder, you will need to double-click on the subfolder titledfirstnamelastname.wordpress.com (e.g., kaylacockrum.wordpress.com), and then double-click on the file titled index.html. Opening this file will launch a browser window showing the eportfolio home page, and from there you will be able to navigate the eportfolio website offline. Because this site is offline, external links to online urls will not function. (Please note that SiteSucker is not compatible with the Chrome browser, and should be opened using Firefox or Safari browsers.)
DOI: 10.7302/nntt-4825
title: Aircraft Data for Airborne Assessment of Urban Atmospheric Chemistry Changes during COVID-19 Shutdowns in Houston and Denver.

description: Data collected by Mooney aircraft over Houston and Denver in Summer 2020.  Flights typically were designed to measure within the boundary layer in a raster pattern perpendicular to wind direction, thus sampling the urban plume repeatedly.  Vertical profiles are conducted on each flight to capture the vertical structure and mixing depths of the atmosphere.  The data file contains all merged flight data from each flight day.
description: Data collected by Mooney aircraft over Houston and Denver in Summer 2020. Measurements of methane (CH4), carbon dioxide (CO2), carbon monoxide (CO), and water vapor (H2O), are collected with the Picarro model 2301-f instrument with wavelength-scanned cavity ringdown spectrometry. Measurements were made at a frequency of 0.33 to 0.5 Hz with an uncertainty of 1.4 ppb CH4. Ozone (O3) was collected by the 2B 205 Dual Beam Ozone Monitor using two detection cells to simultaneously measure ozone scrubbed and non-scrubbed air. Samples were made at a frequency of 0.5 Hz with an average precision and accuracy of 1 ppb. GPS antennae, mounted on the Mooney aircraft, recorded latitude, longitude, altitude, aircraft heading, zonal speed, and meridional speed. Horizontal winds are calculated following Conley et al (2014) . Temperature (Co) and humidity (%) were collected with the Vaisala HMP60 probe. Aircraft speeds averaged around 70 meters per second.
DOI: 10.7302/d8tf-3q07
title: Impulse Buying Content Analysis and Online Survey

description: This work investigates what features e-commerce sites use to encourage impulse buying and what tools consumers desire to curb their online spending. We present supplementary material for two studies: (1) a
systematic content analysis of 200 top e-commerce websites in the U.S. and (2) a survey of online impulse
buyers (N=151). 

Files include: 
(1) Study 1 Code book for content analysis of websites
(2) Study 1 CSV data file resulting from the content analysis
(3) Study 1 PDFs (N=200) of e-commerce websites analyzed
(4) Study 2 Online survey questionnaire
(5) Study 2 Survey code book for free response questions
description: 1. Study 1 is a content analysis of e-commerce websites.
2. Study 2 is an online survey on online impulse buyers.
DOI: 10.7302/nysf-xt10
title: Tamashek-speaking (Berber, Mali) village photos

description: Images of villages in Mali in which Tamashek (Berber family) is the primary language. Each file name contains important information about the photos, and are structured thus: LanguageFamily_Language_IdentificationNumber_GeographicCoordinate_Description_Date_InitialsOfThePhotographer
description: Photography
DOI: 10.7302/xsey-et19
title: Physical properties and magnetic susceptibility for SPR0901-unnamed

description: This dataset includes core physical properties (e.g., bulk density, porosity, P-wave velocity) and magnetic susceptibility data for the box core SPR0901-unnamed (34.2816°N, 120.0415°W, 588 m water depth) measured on the multisensor track (MST). SPR0901-unnamed was collected by the research vessel R/V Sproul off Southern California in 2009.1.
description: The box core SPR0901-unnamed only has one section. Multisensor track (MST) and magnetic susceptibility measurements were made every 0.5 cm on the Geotek MSCL (multisensor core logger) at the LacCore Facility, University of Minnesota in 2010. This research is funded by NSF OCE-0752093.
DOI: 10.7302/xsze-db81
title: Results from simulations of earthquake rupture in fault zones with along-strike heterogeneity

description: Geological and geophysical observations reveal along-strike fault zone heterogeneity on major strike-slip faults, which can play a significant role in earthquake rupture propagation and termination. I present 2D dynamic rupture simulations to demonstrate rupture characteristics in such heterogeneous fault zone structure. The modeled rupture is nucleated in a damaged fault zone and propagates on a preexisting fault towards the zone of intact rocks. There is an intermediate range of nucleation lengths that only allow rupture to spontaneously propagate in the damaged fault zone but not in a homogeneous medium. I find that rupture with an intermediate nucleation length tends to stop when it reaches the zone of intact rocks, especially when the rupture propagation distance in the damaged fault zone is relatively short and when the damaged fault zone is relatively narrow or smooth in the fault-normal direction. Pronounced small-scale heterogeneity within the damaged fault zone also contributes to such early rupture termination. In asymmetric fault zones bisected by a bimaterial fault, rupture moving in the direction of slip of faster rocks tends to terminate under the same conditions as in symmetric fault zones, whereas rupture moving in the direction of slip of slower rocks can penetrate into the zone of intact rocks. Break-through rupture is allowed when a sufficiently-large asperity is located at the edge of the zone of intact rocks. The results suggest the along-strike fault zone heterogeneity can play a critical role in seismicity distribution.

The data set contains multiple folders of simulation results from the SEM2DPACK that demonstrate the above findings. The folder name includes the model parameters in each simulation as explained in the README file. The Flt01_sem2d.data file in the folder documents the slip, slip rate and stresses from each simulation. The files are also explained in the manual of SEM2DPACK (http://web.gps.caltech.edu/~ampuero/soft/users_guide_sem2dpack.pdf). Please refer to section 4.6 in the manual and use “sem2d_read_fault.m” in the POST folder of SEM2DPACK to plot the results.
description: The simulations are carried out and processed using a 2D spectral element method (SEM2DPACK, http://www.sourceforge.net/projects/sem2d/).
DOI: 10.7302/z2154f89
title: X-ray tomography dataset for 'Caught in the act: The mechanism of eutectic modification by trace impurities'

description: The data file is comprised of 22,500 X-ray projections (15 scans of 1500 projections each) recorded during solidification of Al-Ge-Na. The raw data file is in .hdf format and can be reconstructed into .tiff, e.g., by using the TomoPy toolbox in Python.
description: The data file contains X-ray projection images collected at the Advanced Photon Source in Argonne National Laboratory (Argonne, IL). Pre-processing of data involved extraction and reconstruction of projection images from the .hdf raw data file using TomoPy toolbox in Python. Then, computer vision algorithms were developed in MATLAB to process (segment) the images followed by 3D visualization and quantitative analysis.
DOI: 10.7302/z2d50k5h
title: Demographically diverse crowds are typically not much wiser than homogeneous crowds

description: These studies assess the effect of social identity on judgement and are described in "Demographically diverse crowds are typically not much wiser than homogeneous crowds" (de Oliveira, S., & Nisbett, R. E. Proceedings of the National Academy of Sciences, 2018) and the article’s Supporting Information appendix. Some studies use a variety of questions to assess multiple social identity factors; the other studies are narrowed to particular social identity variables. Each study includes some type of estimation or prediction task, collects social identity variables, and asks participants to indicate their answer strategies.

Study 1 is a trivia and prediction task based on football team fan identity.

Study 2 reports on demographics plus political and religious identity and asks participants to predict vote percentages in presidential primaries.

Study 3 participants estimate the percentage of Americans that support statements on various polarizing political views and give likelihood ratings for presidential candidates to win the Iowa caucus; a variety of identity questions are asked including political and religious identity.

Study 4 includes demographics plus political and religious identity questions and asks participants to predict how the candidates would perform in the 2016 United States presidential election.

Study 5 asks participants to guess the popularity rating of books that had either gender-specific or gender-neutral appeal, and also to rate their own interest in the books. Demographic-based social identity variables such as sex are included.

Study 6 includes a wide variety of social identity variables and asks participants to estimate the likelihood of events occurring in the near future.

Study 7 participants are from diverse national backgrounds and completed judgement tasks that predicted stock prices, Olympic performance, and news events outcomes.

The data are generally interpretable when examined in conjunction with the target article. A new data file for Study 6 was uploaded on April 4, 2018 to include variables that were inadvertently left out of the original Study 6 file. A new data file for Study 7 was uploaded on April 6, 2018 to include variables that were inadvertently left out of the original Study 7 file. A codebook for this data set was added on April 6, 2018. 
description: These data were collected via online surveys between 2015 and 2017. In studies 1-6, participants were recruited using Amazon Mechanical Turk. For study 7, participants were obtained via e-mails from the registrar’s office at a large Midwestern university. All studies have at least 50 participants.
DOI: 10.7302/z2vd6wpp
title: Student Writing Eportfolio: "Dan's" Gateway

description: This eportfolio was created for the Gateway course of the Sweetland Minor in Writing to provide an opportunity for students to reflect on their growing identities as writers, as captured in their text-based and multimodal compositions produced over the Gateway semester. The title of the work contains the pseudonym created for the study while the creator field lists the student's given name to allow proper attribution for their work. The eportfolio is collected here as an artifact in the Sweetland Writing Development Study, which has been published as Developing Writers in Higher Education: A Longitudinal Study (University of Michigan Press, 2019). To learn more about this study, please see the epublication: https://doi.org/10.3998/mpub.10079890), and to learn more about the Minor in Writing program and the eportfolio prompts, please see Appendix 2a (https://doi.org/10.3998/mpub.10079890.cmp.1) to the publication.
description: This link will download a zipped folder of files created with SiteSucker, “a Macintosh application that automatically downloads websites from the Internet. It does this by asynchronously copying the site's webpages, images, PDFs, style sheets, and other files to your local hard drive, duplicating the site's directory structure” (SiteSucker Manual: https://ricks-apps.com/osx/sitesucker/archive/2.x/2.6.x/2.6/manuals/en/pgs/Overview.html]). To open the eportfolio website compressed in this zipped folder, you will need to double-click on the subfolder titledfirstnamelastname.wordpress.com (e.g., kaylacockrum.wordpress.com), and then double-click on the file titled index.html. Opening this file will launch a browser window showing the eportfolio home page, and from there you will be able to navigate the eportfolio website offline. Because this site is offline, external links to online urls will not function. (Please note that SiteSucker is not compatible with the Chrome browser, and should be opened using Firefox or Safari browsers.)
DOI: 10.7302/1c53-zy98
title: Global modelling of secondary organic aerosol (SOA) with organic nucleation

description: The dataset contains the Fortran programs applied in the latest CESM/IMPACT model as well as the data created from this model, which are used in the referenced paper.
description: The CESM/IMPACT model is used to create these data.
DOI: 10.7302/4mpr-4364
title: FVCOM-UGCICE source codes and model results for assessment of precipitation impact on Great Lakes ice cover and water temperature

description: Precipitation impacts on ice cover and water temperature in the Laurentian Great Lakes were examined using state-of-art coupled ice-hydrodynamic models. Numerical experiments were conducted for the recent anomalously cold (2014-2015) and warm (2015-2016) winters that were accompanied by high and low ice coverage over the lakes, respectively. The results of numerical experiments showed that, snow cover on the ice, which is the manifestation of winter precipitation, reduced the total ice volume (or mean ice thickness) in all of the Great Lakes, shortened the ice duration, and allowed earlier warming of water surface. The reduced ice volume was due to the thermal insulation of snow cover. The surface albedo was also increased by snow cover, but its impact on the delay the melting of ice was overcome by the thermal insulation effect. During major snowstorms, snowfall over the open lake caused notable cooling of the water surface due to latent heat absorption. Overall, the sensible heat flux from rain in spring and summer was found to have negligible impacts on the water surface temperature. Although uncertainties remain in over-lake precipitation estimates and model’s representation of snow on the ice, this study demonstrated that winter precipitation, particularly snowfall on the ice and water surfaces, is an important contributing factor in Great Lakes ice production and thermal conditions from late fall to spring. 
description: This dataset includes the representative model results for the Laurentuan Great Lakes from the Finite-Volume Community Ocean Model coupled with the unstructured grid version of the Los Alamos Sea Ice Model (FVCOM-UGCICE), the model source codes, and namelist files that were used for the simulations. In the source codes, the updates are made so that the model can take account of the precipitation heat flux at the ice/water surface.