cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.jbkau8
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Shangrilaia nana"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011054-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j52wwh
title: Occurrence Download

description: A dataset containing 345 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odontarrhena chalcidica"
 ]
}

 The dataset includes 345 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011055-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.th3wdy
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Lasiurus cinereus)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011058-250717081556266/datasets/export for details.
DOI: 10.15468/dl.vsfk4q
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Geranium purpureum leiosepalum, Geranium purpureum littorale, Geranium purpureum littorale, Geranium purpureum littorale, Geranium robertianum adenophorum, Geranium robertianum adenophorum, Geranium robertianum albidum, Geranium robertianum albidum, Geranium robertianum albiflorum, Geranium robertianum crassicaule)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011060-250717081556266/datasets/export for details.
DOI: 10.15468/dl.vs89pm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Lasiurus cinereus)",
 "Country is one of (Algeria, Angola, Benin, Botswana, British Indian Ocean Territory, Burkina Faso, Burundi, Cabo Verde, Cameroon, Central African Republic, Chad, Comoros, Congo, Congo, Democratic Republic of the, Côte d’Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Eswatini, Ethiopia, French Southern Territories, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Ascension and Tristan da Cunha, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, South Sudan, Sudan, Tanzania, United Republic of, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011059-250717081556266/datasets/export for details.
DOI: 10.5281/zenodo.16138112
title: SARS-CoV-2 Infektionen in Deutschland

description: Der vorliegende Datansatz enthält umfassende Informationen zu SARS-CoV-2-Infektionen in Deutschland, die gemäß dem Infektionsschutzgesetze (IfSG) von den Gesundheitsämtern an das Robert Koch-Institut (RKI) gemeldet wurden. Die Daten umfassen Informationen zur Anzahl der bestätigten Fälle, Todesfälle und Genesungen, aus denen sich weitere Kennzahlen im Zusammenhang mit der COVID-19-Pandemie ableiten lassen. Der Datensatz wird täglich aktualisiert und enthält detaillierte Informationen auf Landkreisebene, die nach verschiedenen Altersgruppen aufgeschlüsselt sind. Die Bereitstellung des Datensatzes soll dazu beitragen, das Verständnis der COVID-19-Pandemie in Deutschland zu verbessern und die Berichterstattung, Forschung und Analyse in diesem Bereich zu unterstützen.
DOI: 10.15468/dl.cnseex
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Lasiurus cinereus)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011061-250717081556266/datasets/export for details.
DOI: 10.15468/dl.3q8xbk
title: Occurrence Download

description: A dataset containing 7900 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Pseudacris cadaverina)"
 ]
}

 The dataset includes 7900 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011062-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r9cn6d
title: Occurrence Download

description: A dataset containing 542 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Saurauia bullosa"
 ]
}

 The dataset includes 542 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011063-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9738vf
title: Occurrence Download

description: A dataset containing 295 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Silene csereii",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 295 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011064-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4gezg8
title: Occurrence Download

description: A dataset containing 670 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Silene csereii",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 670 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011065-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nkzgbd
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Atriplex hortensis",
 "Country is India",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011066-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ntrcty
title: Occurrence Download

description: A dataset containing 2711 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Geometry POLYGON((-148.44 59.27,-118.08 59.27,-118.08 69.77,-148.44 69.77,-148.44 59.27))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC0 1.0, CC-BY 4.0, CC-BY-NC 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Ochrophyta"
 ]
}

 The dataset includes 2711 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011068-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9kau89
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Atriplex hortensis",
 "Country is Kyrgyzstan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011071-250717081556266/datasets/export for details.
DOI: 10.15468/dl.trsem6
title: Occurrence Download

description: A dataset containing 179 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rasbora bankanensis"
 ]
}

 The dataset includes 179 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011070-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f6gt2v
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Atriplex hortensis",
 "Country is Latvia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011072-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xje7qk
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tambourissa peltata"
 ]
}

 The dataset includes 63 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011073-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29603151
title: Additional file 1 of Acute fish toxicity testing in pesticide risk assessment: still a necessary requirement for the future?

description: Additional file 1.
DOI: 10.6084/m9.figshare.29603151.v1
title: Additional file 1 of Acute fish toxicity testing in pesticide risk assessment: still a necessary requirement for the future?

description: Additional file 1.
DOI: 10.15468/dl.4cxce9
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polygala fallax"
 ]
}

 The dataset includes 39 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011074-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4bbqxc
title: Occurrence Download

description: A dataset containing 681 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepidium englerianum"
 ]
}

 The dataset includes 681 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011075-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zecczy
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erysimum scabrum"
 ]
}

 The dataset includes 282 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011076-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ebe89j
title: Occurrence Download

description: A dataset containing 30746 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Conyza sumatrensis"
 ]
}

 The dataset includes 30746 records from 98 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011077-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4gwwmc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Geranium robertianum dasycarpum, Geranium robertianum euodoratum, Geranium robertianum glabrum, Geranium robertianum gracile, Geranium robertianum gracile, Geranium robertianum graniticarum, Geranium robertianum inciso-rubrum, Geranium robertianum inciso-rubrum, Geranium robertianum inodorum, Geranium robertianum leucantha)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011078-250717081556266/datasets/export for details.
DOI: 10.15468/dl.yv9z73
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Lasiurus borealis)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011079-250717081556266/datasets/export for details.
DOI: 10.15468/dl.6732j9
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Lasiurus borealis)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 56 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011081-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2rfwem
title: Occurrence Download

description: A dataset containing 2392 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Pseudacris clarkii)"
 ]
}

 The dataset includes 2392 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011082-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bcw7pr
title: Occurrence Download

description: A dataset containing 932 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Jurinea deltoidea"
 ]
}

 The dataset includes 932 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011083-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vn84cc
title: Occurrence Download

description: A dataset containing 2251 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Lasiurus borealis)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 2251 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011080-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u8c787
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Atriplex hortensis",
 "Country is Lithuania",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011086-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14293637
title: Multi modal optical coherence tomography flowmetry of organ on chip devices

description: This repository contains raw data and analysis routines of the publication “Multi modal optical coherence tomography flowmetry of organ on chip devices” in Scientific Reports (doi.org/10.1038/s41598-025-10089-9). The reader is free to use the scripts and data in this depository if the manuscript is correctly cited in their work. For further questions, feel free to contact the corresponding author. Python 3.11 was used for programming. Please note that processing OCT intensity data with different apodization windows to match axial and transverse resolutions can be time-consuming. Despite using parallelized processing routines for the measurement data, the full analysis may still take several hours. If the parallelization fails, please restart the kernel and run the code again. Additionally, be aware of the significant RAM usage.

We have conducted number-fluctuation DLS-OCT 2D flow measurements in dilute particle suspensions using the Thorlabs OCT system. Analyzing the measurements necessitates a chirp interpolation and beam shape calibration files. All filenames, whether for raw data or analysis files, are sufficiently descriptive. To analyze the flow measurements, it is essential to have information regarding the measurement time series length (number of A-scans), the number of repeats (B-scans), and the acquisition rate. The results are plotted at the end of our analysis routines, with the parameters displayed as a function of channel length and depth. Raw measurement files and analysis routines are described below.








Name



Description



Parameters





N_a=200, N_b=2000, FOV=3.1, Q=40, along channel.oct



The interference intensity from the Thorlabs OCT for the 2D flow measurement along the channel length.



Na=200, Nb=2000, 5.5 kHz





N_a=200, N_b=2000, FOV=3.1, Q=40, cross-section, center



The interference intensity from the Thorlabs OCT for the 2D flow measurement along the cross-section at the center width of the channel.



Na=200, Nb=2000, 5.5 kHz





N_a=200, N_b=2000, FOV=3.1, Q=40, cross-section, outlet.oct



The interference intensity from the Thorlabs OCT for the 2D flow measurement along the cross-section at the channel outlet.



Na=200, Nb=2000, 5.5 kHz





N_a=200, N_b=2000, FOV=3.1, Q=41, cross-section, inlet.oct



The interference intensity from the Thorlabs OCT for the 2D flow measurement along the cross-section at the channel inlet.



Na=200, Nb=2000, 5.5 kHz





Beam shape.npy



A file containing the calibrated Gaussian beam shape (waist) as a function of axial position (optical depth).



 





Chirp.data



A file containing k-interpolation data for the Thorlabs OCT measurements.



 





ReadOCTFile.py



Written by Jos de Wit, this module reads and imports spectra from raw Thorlabs OCT files.



 





Processing.py



This module contains all analysis functions.



 





2D flow analysis.py



The script is for analyzing raw concentrated 2D flow measurement files from the Thorlabs OCT setup.