cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1057746
title: ALLMAPS supporting data: Yellow catfish genome assembly

description: Supporting data for ALLMAPS. The data set includes yellow cat fish de novo genomic scaffolds, a combination of four tGBS maps including two genders and two mapping software JOINMAP and R/QTL - JMFemale, JMMale, BCFemale, BCMale, respectively. ALLMAPS was run to produce pseudomolecules based on these input data. Weighting scheme for ALLMAPS was equal weights (weight=1) for each of the four input maps. <strong>Command</strong> python -m jcvi.assembly.allmaps path JM-4.bed scaffolds.fasta <strong>Changelog</strong> - 6/7/2015, updated run.sh script
DOI: 10.6084/m9.figshare.1057745
title: ALLMAPS supporting data: Medicago genome assembly

description: Supporting data for ALLMAPS. The data set includes Medicago de novo genomic scaffolds, a combination of three maps including optical map, genetic map and synteny to chickpea. ALLMAPS was run to produce pseudomolecules based on these input data. Weighting scheme for ALLMAPS was optical map (weight=3) &gt; genetic map (weight=2) &gt; synteny (weight=1). <strong>Command</strong> python -m jcvi.assembly.allmaps path Mt.bed scaffolds.fasta --links=40 <strong>Changelog</strong> - 6/7/2015, updated run.sh script
DOI: 10.6084/m9.figshare.1057733
title: Vegetation stracture in field

description: Provides the plants selected randomly two times in the experimental plots
DOI: 10.6084/m9.figshare.1057733.v1
title: Vegetation stracture in field

description: Provides the plants selected randomly two times in the experimental plots
DOI: 10.6084/m9.figshare.1057746.v1
title: ALLMAPS supporting data: Yellow catfish genome assembly

description: Supporting data for ALLMAPS. The data set includes yellow cat fish de novo genomic scaffolds, a combination of four tGBS maps including two genders and two mapping software JOINMAP and R/QTL - JMFemale, JMMale, BCFemale, BCMale, respectively. ALLMAPS was run to produce pseudomolecules based on these input data. Weighting scheme for ALLMAPS was equal weights (weight=1) for each of the four input maps. <strong>Command</strong> python -m jcvi.assembly.allmaps path JM-4.bed scaffolds.fasta <strong>Changelog</strong> - 6/7/2015, updated run.sh script
DOI: 10.6084/m9.figshare.1057745.v1
title: ALLMAPS supporting data: Medicago genome assembly

description: Supporting data for ALLMAPS. The data set includes Medicago de novo genomic scaffolds, a combination of three maps including optical map, genetic map and synteny to chickpea. ALLMAPS was run to produce pseudomolecules based on these input data. Weighting scheme for ALLMAPS was optical map (weight=3) &gt; genetic map (weight=2) &gt; synteny (weight=1). <strong>Command</strong> python -m jcvi.assembly.allmaps path Mt.bed scaffolds.fasta --links=40 <strong><br></strong>
DOI: 10.6084/m9.figshare.1057729.v1
title: Ayre, Lucy and Madjarevic, Natalia (2014) 20 ways to reuse repository content. In: Open Repositories 2014, 9-13 June 2014, Helsinki, Finland.

description: "Abstract Leveraging connections to external services and encouraging the reuse of repository content. We share methods used in LSE Research Online and more".
DOI: 10.6084/m9.figshare.1057684
title: Efficiency Test part 2

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057668
title: Problems

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057684.v2
title: Efficiency Test part 2

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057684.v1
title: Efficiency Test part 2

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057656
title: Efficiency Test part 1

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057668.v1
title: Problems

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057668.v3
title: Problems

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057668.v2
title: Problems

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057638
title: MACAW Data

description: Mouse movement data was extracted from visual data using a bash script and ImageMagick. More details at github.
DOI: 10.6084/m9.figshare.1057640
title: Correctness Test

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057638.v1
title: MACAW Data

description: Mouse movement data was extracted from visual data using a bash script and ImageMagick. More details at github.
DOI: 10.6084/m9.figshare.1057656.v2
title: Efficiency Test part 1

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057636
title: Data from MACAW Pilot Study taken 3/21/2014

description: Mouse movement data was extracted from visual data using a bash script and ImageMagick. More details at github.
DOI: 10.6084/m9.figshare.1057656.v1
title: Efficiency Test part 1

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057636.v1
title: Data from MACAW Pilot Study taken 3/21/2014

description: Mouse movement data was extracted from visual data using a bash script and ImageMagick. More details at github.
DOI: 10.6084/m9.figshare.1057637
title: Data from MACAW Pilot Study taken 3-25-2014

description: Mouse movement data was extracted from visual data using a bash script and ImageMagick. More details at github.
DOI: 10.6084/m9.figshare.1057635
title: Data from MACAW Pilot Study taken 3/19/2014

description: Mouse movement data was extracted from visual data using a bash script and ImageMagick. More details at github.
DOI: 10.6084/m9.figshare.1057640.v1
title: Correctness Test

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057637.v1
title: Data from MACAW Pilot Study taken 3-25-2014

description: Mouse movement data was extracted from visual data using a bash script and ImageMagick. More details at github.
DOI: 10.6084/m9.figshare.1057635.v1
title: Data from MACAW Pilot Study taken 3/19/2014

description: Mouse movement data was extracted from visual data using a bash script and ImageMagick. More details at github.
DOI: 10.6084/m9.figshare.1057640.v3
title: Correctness Test

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1057404
title: The RECONS 25 Parsec Database (Sneak Peek)

description: The RECONS 25 Parsec Database contains information on every object in a star system with a measured trigonometric parallax that places it within 25 parsecs, with less than 10 milliarcsecond error (25% at 25 parsecs). It is intended to be a successor to the Gliese & Jahreiss Catalog of Nearby Stars (see Gliese & Jahreiss 1991) and the NStars catalog (Backman et al. 2000). The database is currently under construction and will continue to evolve as more discoveries are made and added to the database. Everything in this database (excepting the Oort clouds, which are fictional) is from that database. See www.recons.org for updates and more details about the project. If you cite figures from this video, please acknowledge A. Riedel and the RECONS group, P.I. Todd J. Henry
DOI: 10.6084/m9.figshare.1057640.v2
title: Correctness Test

description: Archive with graphs.
DOI: 10.6084/m9.figshare.1056652
title: Talk slides for Cool Stars 18 Cloudy Atmospheres Splinter Session

description: Talk slides for Cool Stars 18 in Flagstaff. On constraining the properties of the dust haze in young brown dwarf atmospheres using the Hansen particle size distribution and Mie theory.
DOI: 10.6084/m9.figshare.1056571
title: Supplementary material

description: Supplementary material for the chapter 'A differential gene expression journey along the life cycle of the Mediterranean encrusting sponge Crella elegans' (Chapter 4) belonging to the PhD thesis entitled 'Transcriptomics along a sponge life cycle' by Alicia R. Pérez-Porro.
DOI: 10.6084/m9.figshare.1056652.v1
title: Talk slides for Cool Stars 18 Cloudy Atmospheres Splinter Session

description: Talk slides for Cool Stars 18 in Flagstaff. On constraining the properties of the dust haze in young brown dwarf atmospheres using the Hansen particle size distribution and Mie theory.
DOI: 10.6084/m9.figshare.1057404.v1
title: The RECONS 25 Parsec Database (Sneak Peek)

description: The RECONS 25 Parsec Database contains information on every object in a star system with a measured trigonometric parallax that places it within 25 parsecs, with less than 10 milliarcsecond error (25% at 25 parsecs). It is intended to be a successor to the Gliese & Jahreiss Catalog of Nearby Stars (see Gliese & Jahreiss 1991) and the NStars catalog (Backman et al. 2000). The database is currently under construction and will continue to evolve as more discoveries are made and added to the database. Everything in this database (excepting the Oort clouds, which are fictional) is from that database. See www.recons.org for updates and more details about the project. If you cite figures from this video, please acknowledge A. Riedel and the RECONS group, P.I. Todd J. Henry
DOI: 10.6084/m9.figshare.1056571.v1
title: Supplementary material

description: Supplementary material for the chapter 'A differential gene expression journey along the life cycle of the Mediterranean encrusting sponge Crella elegans' (Chapter 4) belonging to the PhD thesis entitled 'Transcriptomics along a sponge life cycle' by Alicia R. Pérez-Porro.
DOI: 10.6084/m9.figshare.1056553
title: Spatio-temporal grounding of claims made on the web

description: Social media presents us with a digitally-accessible sample of all human discourse. This sample is full of claims and assertions. While the state of the art in NLP is adapting to the volume, velocity and variety of this sample and the information in it, the accuracy of claims made in social media remain largely unstudied. PHEME, a 36-month EU project started in January 2014, focuses on this fourth challenge:<br>veracity. As a core part of establishing veracity, we need to identify the spatio-temporal context of assertions made on informal websites. <br>This project note introduces the spatio-temporal challenges and planned semantic annotation activities that are part of the PHEME project.
DOI: 10.6084/m9.figshare.1056514
title: Role Analysis in Networks Using Mixtures of Exponential Random Graph Models

description: This article introduces a novel and flexible framework for investigating the roles of actors within a network. Particular interest is in roles as defined by local network connectivity patterns, identified using the ego-networks extracted from the network. A mixture of exponential-family random graph models (ERGM) is developed for these ego-networks to cluster the nodes into roles. We refer to this model as the ego-ERGM. An expectation-maximization algorithm is developed to infer the unobserved cluster assignments and to estimate the mixture model parameters using a maximum pseudo-likelihood approximation. We demonstrate the flexibility and utility of the method using examples of simulated and real networks.
DOI: 10.6084/m9.figshare.3761562.v1595
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.1056513
title: Wavelet-Based Weighted LASSO and Screening Approaches in Functional Linear Regression

description: One useful approach for fitting linear models with scalar outcomes and functional predictors involves transforming the functional data to wavelet domain and converting the data-fitting problem to a variable selection problem. Applying the LASSO procedure in this situation has been shown to be efficient and powerful. In this article, we explore two potential directions for improvements to this method: techniques for prescreening and methods for weighting the LASSO-type penalty. We consider several strategies for each of these directions which have never been investigated, either numerically or theoretically, in a functional linear regression context. We compare the finite-sample performance of the proposed methods through both simulations and real-data applications with both 1D signals and 2D image predictors. We also discuss asymptotic aspects. We show that applying these procedures can lead to improved estimation and prediction as well as better stability. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.1056514.v2
title: Role Analysis in Networks Using Mixtures of Exponential Random Graph Models

description: This article introduces a novel and flexible framework for investigating the roles of actors within a network. Particular interest is in roles as defined by local network connectivity patterns, identified using the ego-networks extracted from the network. A mixture of exponential-family random graph models (ERGM) is developed for these ego-networks to cluster the nodes into roles. We refer to this model as the ego-ERGM. An expectation-maximization algorithm is developed to infer the unobserved cluster assignments and to estimate the mixture model parameters using a maximum pseudo-likelihood approximation. We demonstrate the flexibility and utility of the method using examples of simulated and real networks.
DOI: 10.6084/m9.figshare.1056508
title: Pennsylvania Odonata Records

description: Dragonfly and damselfly (Insecta: Odonata) records for the state of Pennsylvania, compiled by Clark Shiffer, George W. Beatty, and Hal White. See Introductory comments document in the document set for more information. Any citation of these records should exclude Andrew R. Deans as an author (ARD just uploaded these documents on behalf of the Frost Entomological Museum)
DOI: 10.6084/m9.figshare.1056513.v2
title: Wavelet-Based Weighted LASSO and Screening Approaches in Functional Linear Regression

description: One useful approach for fitting linear models with scalar outcomes and functional predictors involves transforming the functional data to wavelet domain and converting the data-fitting problem to a variable selection problem. Applying the LASSO procedure in this situation has been shown to be efficient and powerful. In this article, we explore two potential directions for improvements to this method: techniques for prescreening and methods for weighting the LASSO-type penalty. We consider several strategies for each of these directions which have never been investigated, either numerically or theoretically, in a functional linear regression context. We compare the finite-sample performance of the proposed methods through both simulations and real-data applications with both 1D signals and 2D image predictors. We also discuss asymptotic aspects. We show that applying these procedures can lead to improved estimation and prediction as well as better stability. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.1056514.v1
title: Role Analysis in Networks using Mixtures of Exponential Random Graph Models

description: A novel and flexible framework for investigating the roles of actors within a network is introduced. Particular interest is in roles as defined by local network connectivity patterns, identified using the ego-networks extracted from the network. A mixture of Exponential-family Random Graph Models is developed for these ego-networks in order to cluster the nodes into roles. We refer to this model as the ego-ERGM. An Expectation-Maximization algorithm is developed to infer the unobserved cluster assignments and to estimate the mixture model parameters using a maximum pseudo-likelihood approximation. The flexibility and utility of the method are demonstrated on examples of simulated and real networks.
DOI: 10.6084/m9.figshare.1056513.v1
title: Wavelet-based Weighted LASSO and Screening Approaches in Functional Linear Regression

description: One useful approach for fitting linear models with scalar outcomes and functional predictors involves transforming the functional data to wavelet domain and converting the data fitting problem to a variable selection problem. Applying the LASSO procedure in this situation has been shown to be efficient and powerful. In this paper we explore two potential directions for improvements to this method: techniques for pre-screening and methods for weighting the LASSO-type penalty. We consider several strategies for each of these directions which have never been investigated, either numerically or theoretically, in a functional linear regression context. The finite-sample performance of the proposed methods are compared through both simulations and real-data applications with both 1D signals and 2D image predictors. We also discuss asymptotic aspects. We show that applying these procedures can lead to improved estimation and prediction as well as better stability.
DOI: 10.6084/m9.figshare.1056322
title: Temperature data

description: Some data files I collected involving temperature logging and measurement.
DOI: 10.6084/m9.figshare.1056319
title: Penmaenmawr outdoor temperatures

description: These data show approximate outdoor temperatures in Penmaenmawr since around the middle of March 2014, at about 5-10 minute intervals, until early September 2014. They were collected with an Elitech RC-4 logger using an external thermistor probe which was checked against a lab thermometer with a sub-degree correlation between 0C and 80C. The probe was placed about 150mm above a concrete surface next to a wall and although shaded by a plant and pot the high peaks may be somewhat influenced by some direct sun plus reflections off the adjacent white painted walls (facing approximately SW one side and NW the other side). However, it gives a general indication of temperature trends in the locality.
DOI: 10.6084/m9.figshare.1056508.v1
title: Pennsylvania Odonata Records

description: Dragonfly and damselfly (Insecta: Odonata) records for the state of Pennsylvania, compiled by Clark Shiffer, George W. Beatty, and Hal White. See Introductory comments document in the document set for more information. Any citation of these records should exclude Andrew R. Deans as an author (ARD just uploaded these documents on behalf of the Frost Entomological Museum)
DOI: 10.6084/m9.figshare.1056319.v1
title: Penmaenmawr outdoor temperatures

description: These data show approximate outdoor temperatures in Penmaenmawr since around the middle of March 2014, at about 5-10 minute intervals. They were collected with an Elitech RC-4 logger using an external thermistor probe which was checked against a lab thermometer with a sub-degree correlation between 0C and 80C. The probe was placed about 150mm above a concrete surface next to a wall and although shaded by a plant and pot the high peaks may be somewhat influenced by some direct sun plus reflections off the adjacent white painted walls (facing approximately SW one side and NW the other side). However, it gives a general indication of temperature trends in the locality.
DOI: 10.6084/m9.figshare.1056508.v2
title: Pennsylvania Odonata Records

description: Dragonfly and damselfly (Insecta: Odonata) records for the state of Pennsylvania, compiled by Clark Shiffer, George W. Beatty, and Hal White. See Introductory comments document in the document set for more information. Any citation of these records should exclude Andrew R. Deans as an author (ARD just uploaded these documents on behalf of the Frost Entomological Museum)
DOI: 10.6084/m9.figshare.1056315
title: Energy logging - Electricity

description: This category contains data from electrical power logging.
DOI: 10.6084/m9.figshare.1056322.v1
title: Temperature data

description: Some data files I collected involving temperature logging and measurement.
DOI: 10.6084/m9.figshare.1056508.v3
title: Pennsylvania Odonata Records

description: Dragonfly and damselfly (Insecta: Odonata) records for the state of Pennsylvania, compiled by Clark Shiffer, George W. Beatty, and Hal White. See Introductory comments document in the document set for more information. Any citation of these records should exclude Andrew R. Deans as an author (ARD just uploaded these documents on behalf of the Frost Entomological Museum)
DOI: 10.6084/m9.figshare.1056314
title: Saturated and compressed liquid heat capacity at constant volume for 1-hexyl-3-methylimidazolium bis[(trifluoromethyl)sulfonyl]imide)

description: One-phase liquid and two-phase liquid + vapour equilibrium, isochoric heat capacities () and densities () were measured for ionic liquid (IL) 1-hexyl-3-methylimidazolium bis[(trifluoromethyl)sulfonyl]imide ([C<sub>6</sub>mim][NTf<sub>2</sub>]). Measurements were concentrated near the liquid-gas phase transition curve in order to closely observe the changes. The measurements have been made over the temperature range from (330 to 480) K and pressures up to 20 MPa using a high-temperature, high-pressure, nearly constant volume adiabatic calorimeter. The values of temperature at the liquid-gas phase transition curve for each measured isochore (phase transition parameters, ) were obtained by analysis of the quasistatic thermograms (readings of PRT, <i>T</i>− plot) and barograms (readings of the pressure transducer, <i>P</i>− plot). The combined expanded uncertainty of the density, , and isochoric heat capacity, , measurements at the 95% confidence level with a coverage factor of <i>k </i>= 2 is estimated to be 0.06% and 2.0%, respectively.
DOI: 10.6084/m9.figshare.1056319.v2
title: Penmaenmawr outdoor temperatures

description: These data show approximate outdoor temperatures in Penmaenmawr since around the middle of March 2014, at about 5-10 minute intervals. They were collected with an Elitech RC-4 logger using an external thermistor probe which was checked against a lab thermometer with a sub-degree correlation between 0C and 80C. The probe was placed about 150mm above a concrete surface next to a wall and although shaded by a plant and pot the high peaks may be somewhat influenced by some direct sun plus reflections off the adjacent white painted walls (facing approximately SW one side and NW the other side). However, it gives a general indication of temperature trends in the locality.
DOI: 10.6084/m9.figshare.1056312
title: Low consumption home power logging

description: These data show power and energy values every 10 seconds over a 9 day period for a 'low consumption' household in North Wales. The data start at midnight on a Friday and end at midnight on the Sunday of the following weekend.
DOI: 10.6084/m9.figshare.1056319.v4
title: Penmaenmawr outdoor temperatures

description: These data show approximate outdoor temperatures in Penmaenmawr since around the middle of March 2014, at about 5-10 minute intervals, until early September 2014. They were collected with an Elitech RC-4 logger using an external thermistor probe which was checked against a lab thermometer with a sub-degree correlation between 0C and 80C. The probe was placed about 150mm above a concrete surface next to a wall and although shaded by a plant and pot the high peaks may be somewhat influenced by some direct sun plus reflections off the adjacent white painted walls (facing approximately SW one side and NW the other side). However, it gives a general indication of temperature trends in the locality.
DOI: 10.6084/m9.figshare.1056508.v5
title: Pennsylvania Odonata Records

description: Dragonfly and damselfly (Insecta: Odonata) records for the state of Pennsylvania, compiled by Clark Shiffer, George W. Beatty, and Hal White. See Introductory comments document in the document set for more information. Any citation of these records should exclude Andrew R. Deans as an author (ARD just uploaded these documents on behalf of the Frost Entomological Museum)