cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7375145.v1
title: Additional file 1: of Nebulization versus standard application for topical anaesthesia during flexible bronchoscopy under moderate sedation â a randomized controlled trial

description: Supplementary data. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.7375133
title: Additional file 5: of Identification of a transcriptome profile associated with improvement of organ function in septic shock patients after early supportive therapy

description: Table S3. Differentially expressed gene (DEG) T2vsT1 in non-responder (NR) patients. This table describes the results of the differential expression analysis between T1 and T2 in NRs. In total, 1914 DEGs were identified with a padj
DOI: 10.7284/129983
title: PTU (Pressure, Temperature, Humidity) data collected during research cruise OC1805C using a Vaisala PTU300 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7375130
title: Additional file 3: of MeioCapture: an efficient method for staging and isolation of meiocytes in the prophase I sub-stages of meiosis in wheat

description: Table S2. Purity analysis ofÂ meiocytes isolated from Stettler and Fielder using MeioCapture protocol. Data was collected from at least 3 independent replicates for each meiotic stage. The numbers within each replication represent the number of meiocytes present in 1Â ÎźL of meiocyte extract. The analysis of variance estimates showed no significant differences in success rate in identifying the correct prophase I sub-stages between CS, Fielder and Stettler. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7375133.v1
title: Additional file 5: of Identification of a transcriptome profile associated with improvement of organ function in septic shock patients after early supportive therapy

description: Table S3. Differentially expressed gene (DEG) T2vsT1 in non-responder (NR) patients. This table describes the results of the differential expression analysis between T1 and T2 in NRs. In total, 1914 DEGs were identified with a padj
DOI: 10.6084/m9.figshare.7375127
title: Additional file 4: of Identification of a transcriptome profile associated with improvement of organ function in septic shock patients after early supportive therapy

description: Table S2. Differentially expressed gene (DEG) T2vsT1 in responder (R) patients. This table describes the results of the differential expression analysis between T1 and T2 in Rs. In total, 1979 DEGs were identified with a padj
DOI: 10.6084/m9.figshare.7375130.v1
title: Additional file 3: of MeioCapture: an efficient method for staging and isolation of meiocytes in the prophase I sub-stages of meiosis in wheat

description: Table S2. Purity analysis ofÂ meiocytes isolated from Stettler and Fielder using MeioCapture protocol. Data was collected from at least 3 independent replicates for each meiotic stage. The numbers within each replication represent the number of meiocytes present in 1Â ÎźL of meiocyte extract. The analysis of variance estimates showed no significant differences in success rate in identifying the correct prophase I sub-stages between CS, Fielder and Stettler. (XLSX 15 kb)
DOI: 10.7284/129986
title: Radiometer data collected during research cruise OC1805C using a RMR Co. PRP instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7375121
title: Additional file 2: of MeioCapture: an efficient method for staging and isolation of meiocytes in the prophase I sub-stages of meiosis in wheat

description: Table S1. Purity analysis of meiocytes isolated from Chinese Spring using MeioCapture protocol. Data was collected from at least 10 independent replicates for each meiotic stage. The numbers within each replication represent the number of meiocytes present in 1Â ÎźL of meiocyte extract. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.7375127.v1
title: Additional file 4: of Identification of a transcriptome profile associated with improvement of organ function in septic shock patients after early supportive therapy

description: Table S2. Differentially expressed gene (DEG) T2vsT1 in responder (R) patients. This table describes the results of the differential expression analysis between T1 and T2 in Rs. In total, 1979 DEGs were identified with a padj
DOI: 10.6084/m9.figshare.7375121.v1
title: Additional file 2: of MeioCapture: an efficient method for staging and isolation of meiocytes in the prophase I sub-stages of meiosis in wheat

description: Table S1. Purity analysis of meiocytes isolated from Chinese Spring using MeioCapture protocol. Data was collected from at least 10 independent replicates for each meiotic stage. The numbers within each replication represent the number of meiocytes present in 1Â ÎźL of meiocyte extract. (XLSX 13 kb)
DOI: 10.7284/129987
title: Water Temperature data collected during research cruise OC1805C using a Sea-Bird SBE-38 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7375112
title: Additional file 3: of Identification of a transcriptome profile associated with improvement of organ function in septic shock patients after early supportive therapy

description: Table S7. Globin depletion (Mannâ Whitney test). This table summarizes the percentage of reads mapping unambiguously to the reference genome (GRCh38) regarding all genes encoding for globins. For each gene, the following information is reported: mean percentage in responders (Rs) and non-responders (NRs), standard deviation in Rs and NRs, and P value (Mannâ Whitney test) of the comparison test between Rs and NRs. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.7375112.v1
title: Additional file 3: of Identification of a transcriptome profile associated with improvement of organ function in septic shock patients after early supportive therapy

description: Table S7. Globin depletion (Mannâ Whitney test). This table summarizes the percentage of reads mapping unambiguously to the reference genome (GRCh38) regarding all genes encoding for globins. For each gene, the following information is reported: mean percentage in responders (Rs) and non-responders (NRs), standard deviation in Rs and NRs, and P value (Mannâ Whitney test) of the comparison test between Rs and NRs. (XLSX 17 kb)
DOI: 10.7284/129993
title: Water Temperature data collected during research cruise OC1805C using a Sea-Bird SBE-48 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7375097
title: Additional file 2: of Identification of a transcriptome profile associated with improvement of organ function in septic shock patients after early supportive therapy

description: Table S1. Metrics and basic statistics of sequencing data. This table reports the number of reads processed along the data analysis workflow. In particular, it presented the number of sequenced reads (raw reads), the number of quality filters passing reads (trimmed reads), and the number of reads that map to exons (column E). Columns F to I report the percentage of reads mapping to rRNA and the rate of mapping along genic or intergenic regions. (XLSX 16 kb)
DOI: 10.7284/129992
title: Timeserver data collected during research cruise OC1805C using a Microsemi SyncServer S350 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7375097.v1
title: Additional file 2: of Identification of a transcriptome profile associated with improvement of organ function in septic shock patients after early supportive therapy

description: Table S1. Metrics and basic statistics of sequencing data. This table reports the number of reads processed along the data analysis workflow. In particular, it presented the number of sequenced reads (raw reads), the number of quality filters passing reads (trimmed reads), and the number of reads that map to exons (column E). Columns F to I report the percentage of reads mapping to rRNA and the rate of mapping along genic or intergenic regions. (XLSX 16 kb)
DOI: 10.7284/129999
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise OC1806A using a Hawaii UHDAS instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130002
title: Anemometer data collected during research cruise OC1806A using a Gill WindObserver II instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129998
title: Fluorometer data collected during research cruise OC1806A using a WET Labs WETStar instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130003
title: GNSS (Global Navigation Satellite System) data collected during research cruise OC1806A using a Furuno GP-90 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130009
title: GNSS (Global Navigation Satellite System) data collected during research cruise OC1806A using a Ashtech ADU5 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129996
title: Gyrocompass data collected during research cruise OC1806A using a Sperry MK-37 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/129997
title: PTU (Pressure, Temperature, Humidity) data collected during research cruise OC1806A using a Vaisala PTU300 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130000
title: Radiometer data collected during research cruise OC1806A using a RMR Co. PRP instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130005
title: Singlebeam Echosounder data collected during research cruise OC1806A using a Knudsen 3260 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130001
title: Water Temperature data collected during research cruise OC1806A using a Sea-Bird SBE-38 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130007
title: Water Temperature data collected during research cruise OC1806A using a Sea-Bird SBE-48 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130006
title: Timeserver data collected during research cruise OC1806A using a Microsemi SyncServer S350 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130013
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise OC1807A using a Hawaii UHDAS instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130016
title: Anemometer data collected during research cruise OC1807A using a Gill WindObserver II instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7374974
title: Additional file 2: of Drug repositioning using drug-disease vectors based on an integrated network

description: Predicted drugs and probabilities corresponding to the drugs for diseases. (XLSX 2039 kb)
DOI: 10.7284/130012
title: Fluorometer data collected during research cruise OC1807A using a WET Labs WETStar instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7374971
title: Additional file 1: of Towards reducing the immunogenic potential of wheat flour: omega gliadins encoded by the D genome of hexaploid wheat may also harbor epitopes for the serious food allergy WDEIA

description: Summary of MS/MS data from protein spots shown in Fig.Â 1. Data was extracted from Scaffold. (XLSX 3032 kb)
DOI: 10.6084/m9.figshare.7374974.v1
title: Additional file 2: of Drug repositioning using drug-disease vectors based on an integrated network

description: Predicted drugs and probabilities corresponding to the drugs for diseases. (XLSX 2039 kb)
DOI: 10.6084/m9.figshare.7374971.v1
title: Additional file 1: of Towards reducing the immunogenic potential of wheat flour: omega gliadins encoded by the D genome of hexaploid wheat may also harbor epitopes for the serious food allergy WDEIA

description: Summary of MS/MS data from protein spots shown in Fig.Â 1. Data was extracted from Scaffold. (XLSX 3032 kb)
DOI: 10.7284/130017
title: GNSS (Global Navigation Satellite System) data collected during research cruise OC1807A using a Furuno GP-90 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7374959
title: Additional file 1: of Drug repositioning using drug-disease vectors based on an integrated network

description: The mean AUC and standard deviation from repeating 10-fold cross-validations for each disease using random forest and neural network. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.7374959.v1
title: Additional file 1: of Drug repositioning using drug-disease vectors based on an integrated network

description: The mean AUC and standard deviation from repeating 10-fold cross-validations for each disease using random forest and neural network. (XLSX 31 kb)
DOI: 10.7284/130023
title: GNSS (Global Navigation Satellite System) data collected during research cruise OC1807A using a Ashtech ADU5 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130010
title: Gyrocompass data collected during research cruise OC1807A using a Sperry MK-37 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130011
title: PTU (Pressure, Temperature, Humidity) data collected during research cruise OC1807A using a Vaisala PTU300 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7374929
title: Additional file 1: of Coordinate regulation of long non-coding RNAs and protein-coding genes in germ-free mice

description: Table S1. Mapping statistics of RNA-Seq data in various organs from CV and GF mice. Sample IDs, total reads sequenced, total reads mapped, and percentage of reads mapped to the mouse genome are shown. Table S2. lncRNA-PCG pairs in each organ investigated. The gene IDs, chromosome coordniates, gene expression in each individual sample per organ, log2 fold change, as well as FDR-BH (q value) for both lncRNAs and the paired PCGs are shown. Table S3. Regulation of intergenic lncRNAs in liver by the absence of gut mirobiome. Table S4. Regulation of intergenic lncRNAs in duodenum by the absence of gut mirobiome. Table S5. Regulation of intergenic lncRNAs in jejunum by the absence of gut mirobiome. Table S6. Regulation of intergenic lncRNAs in illeum by the absence of gut mirobiome. Table S7. Regulation of intergenic lncRNAs in colon by the absence of gut mirobiome. Table S8. Regulation of intergenic lncRNAs in BAT by the absence of gut mirobiome. Table S9. Regulation of intergenic lncRNAs in WAT by the absence of gut mirobiome. Table S10. Regulation of intergenic lncRNAs in skeletal muscle by the absence of gut mirobiome. (XLSX 279 kb)
DOI: 10.6084/m9.figshare.7374929.v1
title: Additional file 1: of Coordinate regulation of long non-coding RNAs and protein-coding genes in germ-free mice

description: Table S1. Mapping statistics of RNA-Seq data in various organs from CV and GF mice. Sample IDs, total reads sequenced, total reads mapped, and percentage of reads mapped to the mouse genome are shown. Table S2. lncRNA-PCG pairs in each organ investigated. The gene IDs, chromosome coordniates, gene expression in each individual sample per organ, log2 fold change, as well as FDR-BH (q value) for both lncRNAs and the paired PCGs are shown. Table S3. Regulation of intergenic lncRNAs in liver by the absence of gut mirobiome. Table S4. Regulation of intergenic lncRNAs in duodenum by the absence of gut mirobiome. Table S5. Regulation of intergenic lncRNAs in jejunum by the absence of gut mirobiome. Table S6. Regulation of intergenic lncRNAs in illeum by the absence of gut mirobiome. Table S7. Regulation of intergenic lncRNAs in colon by the absence of gut mirobiome. Table S8. Regulation of intergenic lncRNAs in BAT by the absence of gut mirobiome. Table S9. Regulation of intergenic lncRNAs in WAT by the absence of gut mirobiome. Table S10. Regulation of intergenic lncRNAs in skeletal muscle by the absence of gut mirobiome. (XLSX 279 kb)
DOI: 10.7284/130014
title: Radiometer data collected during research cruise OC1807A using a RMR Co. PRP instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130015
title: Water Temperature data collected during research cruise OC1807A using a Sea-Bird SBE-38 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130021
title: Water Temperature data collected during research cruise OC1807A using a Sea-Bird SBE-48 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130020
title: Timeserver data collected during research cruise OC1807A using a Microsemi SyncServer S350 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130027
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise OC1807B using a Hawaii UHDAS instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130030
title: Anemometer data collected during research cruise OC1807B using a Gill WindObserver II instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7374878
title: MOESM4 of Integration of transcriptome and proteome profiles in glioblastoma: looking for the missing link

description: Additional file 4: Table S3. List of identified TFBS located upstream of deregulated proteinsâ coding region.
DOI: 10.6084/m9.figshare.7374878.v1
title: MOESM4 of Integration of transcriptome and proteome profiles in glioblastoma: looking for the missing link

description: Additional file 4: Table S3. List of identified TFBS located upstream of deregulated proteinsâ coding region.
DOI: 10.7284/130026
title: Fluorometer data collected during research cruise OC1807B using a WET Labs WETStar instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7374860
title: MOESM3 of Integration of transcriptome and proteome profiles in glioblastoma: looking for the missing link

description: Additional file 3: Table S2. List of altered biological processes in pooled GB transcriptomic and proteomic profiles.
DOI: 10.6084/m9.figshare.7374860.v1
title: MOESM3 of Integration of transcriptome and proteome profiles in glioblastoma: looking for the missing link

description: Additional file 3: Table S2. List of altered biological processes in pooled GB transcriptomic and proteomic profiles.
DOI: 10.6084/m9.figshare.7374863
title: MOESM1 of N-glycosylation patterns of plasma proteins and immunoglobulin G in chronic obstructive pulmonary disease

description: Additional file 1: Table S1. General description of directly measured plasma protein (GPs) and IgG (IGPs) glycan traits, showing the corresponding glycan structures.
DOI: 10.7284/130031
title: GNSS (Global Navigation Satellite System) data collected during research cruise OC1807B using a Furuno GP-90 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7374863.v1
title: MOESM1 of N-glycosylation patterns of plasma proteins and immunoglobulin G in chronic obstructive pulmonary disease

description: Additional file 1: Table S1. General description of directly measured plasma protein (GPs) and IgG (IGPs) glycan traits, showing the corresponding glycan structures.
DOI: 10.7284/130037
title: GNSS (Global Navigation Satellite System) data collected during research cruise OC1807B using a Ashtech ADU5 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130024
title: Gyrocompass data collected during research cruise OC1807B using a Sperry MK-37 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130025
title: PTU (Pressure, Temperature, Humidity) data collected during research cruise OC1807B using a Vaisala PTU300 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7374836
title: MOESM2 of Integration of transcriptome and proteome profiles in glioblastoma: looking for the missing link

description: Additional file 2: Table S1. Differentially expressed probes between TZ and PBZ pooled samples transcriptomic analysis.
DOI: 10.6084/m9.figshare.7374836.v1
title: MOESM2 of Integration of transcriptome and proteome profiles in glioblastoma: looking for the missing link

description: Additional file 2: Table S1. Differentially expressed probes between TZ and PBZ pooled samples transcriptomic analysis.
DOI: 10.7284/130028
title: Radiometer data collected during research cruise OC1807B using a RMR Co. PRP instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130029
title: Water Temperature data collected during research cruise OC1807B using a Sea-Bird SBE-38 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/130035
title: Water Temperature data collected during research cruise OC1807B using a Sea-Bird SBE-48 instrument system onboard the platform RV Oceanus

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7374800
title: Additional file 4: of Menstrual and reproductive outcomes after use of balloon tamponade for severe postpartum hemorrhage

description: Dataset. This file is the dataset of this study. (XLSX 34 kb)
DOI: 10.6084/m9.figshare.7374797
title: Additional file 1 of Model confidence sets and forecast combination: an application to age-specific mortality

description: Code for Shiny application. The R code to produce a Shiny user interface for plotting every series in the Japanese human mortality data. (ZIP 62 kb)
DOI: 10.6084/m9.figshare.7374800.v1
title: Additional file 4: of Menstrual and reproductive outcomes after use of balloon tamponade for severe postpartum hemorrhage

description: Dataset. This file is the dataset of this study. (XLSX 34 kb)
DOI: 10.6084/m9.figshare.7374797.v1
title: Additional file 1 of Model confidence sets and forecast combination: an application to age-specific mortality

description: Code for Shiny application. The R code to produce a Shiny user interface for plotting every series in the Japanese human mortality data. (ZIP 62 kb)