cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26596337.v1
title: Additional file 1 of Genomic signatures of local adaptation in recent invasive Aedes aegypti populations in California

description: Additional file 1: Table S1. Metadata.
DOI: 10.6084/m9.figshare.26596343
title: Additional file 3 of Genomic signatures of local adaptation in recent invasive Aedes aegypti populations in California

description: Additional file 3: Supplementary table 3. List of genes selected as top candidates by top candidate gene approach, their homologs and biological function and topo-climate variables associated with each candidate gene.
DOI: 10.6084/m9.figshare.26596397
title: Additional file 3 of A comprehensive molecular analysis of 113 primary ovarian clear cell carcinomas reveals common therapeutically significant aberrations

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26596340
title: Additional file 2 of Genomic signatures of local adaptation in recent invasive Aedes aegypti populations in California

description: Additional file 2: Supplementary table 2. Environmental data collected from ClimateNA database for each sampling site.
DOI: 10.15468/dl.szyvpx
title: Occurrence Download

description: A dataset containing 1367 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Penelope pileata Wagler, 1830"
 ]
}

 The dataset includes 1367 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066305-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xqrguf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.548546 -32.414149, 149.548546 -32.416395, 149.550792 -32.416395, 149.550792 -32.414149, 149.548546 -32.414149))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066306-240626123714530/datasets/export for details.
DOI: 10.15468/dl.epxs37
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((143.875658 -36.723837, 143.875658 -36.728329, 143.88015 -36.728329, 143.88015 -36.730575, 143.882395 -36.730575, 143.882395 -36.726083, 143.877904 -36.726083, 143.877904 -36.723837, 143.875658 -36.723837)), ((143.882395 -36.730575, 143.882395 -36.739558, 143.886887 -36.739558, 143.886887 -36.744049, 143.889133 -36.744049, 143.889133 -36.739558, 143.89587 -36.739558, 143.89587 -36.744049, 143.900362 -36.744049, 143.900362 -36.741804, 143.898116 -36.741804, 143.898116 -36.735066, 143.89587 -36.735066, 143.89587 -36.730575, 143.891379 -36.730575, 143.891379 -36.728329, 143.889133 -36.728329, 143.889133 -36.730575, 143.882395 -36.730575)), ((143.882395 -36.739558, 143.88015 -36.739558, 143.88015 -36.744049, 143.882395 -36.744049, 143.882395 -36.739558)), ((143.882395 -36.744049, 143.882395 -36.746295, 143.88015 -36.746295, 143.88015 -36.762016, 143.864429 -36.762016, 143.864429 -36.766507, 143.859937 -36.766507, 143.859937 -36.770999, 143.864429 -36.770999, 143.864429 -36.775491, 143.875658 -36.775491, 143.875658 -36.784474, 143.882395 -36.784474, 143.882395 -36.78672, 143.886887 -36.78672, 143.886887 -36.806932, 143.891379 -36.806932, 143.891379 -36.793457, 143.893624 -36.793457, 143.893624 -36.791211, 143.889133 -36.791211, 143.889133 -36.784474, 143.891379 -36.784474, 143.891379 -36.755278, 143.889133 -36.755278, 143.889133 -36.753033, 143.891379 -36.753033, 143.891379 -36.748541, 143.89587 -36.748541, 143.89587 -36.744049, 143.891379 -36.744049, 143.891379 -36.746295, 143.886887 -36.746295, 143.886887 -36.744049, 143.882395 -36.744049)))"
 ]
}

 The dataset includes 34 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066307-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13320723
title: RESSPECT metric

description: Data whose results are described on Malz, Dai et al., arXiv:astro-ph/2305.14421.
DOI: 10.5281/zenodo.13320724
title: RESSPECT metric

description: Data whose results are described on Malz, Dai et al., arXiv:astro-ph/2305.14421.
DOI: 10.15468/dl.2tpfkt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.268441 -32.411903, 148.268441 -32.414149, 148.272932 -32.414149, 148.272932 -32.411903, 148.268441 -32.411903)), ((148.272932 -32.414149, 148.272932 -32.41864, 148.268441 -32.41864, 148.268441 -32.420886, 148.275178 -32.420886, 148.275178 -32.414149, 148.272932 -32.414149)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066308-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26596415
title: Additional file 5 of Development of HPV16 mouse and dog models for more accurate prediction of human vaccine efficacy

description: Additional file 5. Table S2: Details of ddPCR and RT-ddPCR experiments following dMIQE recommendations.
DOI: 10.6084/m9.figshare.26596415.v1
title: Additional file 5 of Development of HPV16 mouse and dog models for more accurate prediction of human vaccine efficacy

description: Additional file 5. Table S2: Details of ddPCR and RT-ddPCR experiments following dMIQE recommendations.
DOI: 10.6084/m9.figshare.26596373.v1
title: Additional file 2 of Lignin-degrading enzymes from a pathogenic canker-rot fungus Inonotus obliquus strain IO-B2

description: Additional file 2: Table. S3. Annotation of genes related to wood degradation.
DOI: 10.6084/m9.figshare.26567165
title: Additional file 2 of Can allele-specific loop-mediated isothermal amplification be used for rapid detection of target-site herbicide resistance in Lolium spp.?

description: Additional file 2. Completed list of the primers used in AS-LAMP set-up: the different primer sets designed for each target mutation are reported.
DOI: 10.17632/34rx4md6k6.1
title: gDNA chromatograms of reference plants used for the development of AS-LAMP in Lolium spp. resistant to herbicides

description: The data included in this repository were used for the set-up of Allele-Specific Loop-Mediated Isothermal Amplification (AS-LAMP) protocols for the detection of target-site resistance in Lolium spp. Two type of herbicide resistance, to acetolactate synthase (ALS) inhibitors and to Acetyl-CoA carboxylase (ACCase) inhibitors, and the most frequent point mutations detected responsible for herbicide resistance, 197, 376 and 574 in ALS gene and 1781, 2041 and 2078 in ACCase gene, were considered. The sequences of some samples previously characterized with specific genotypes were used for the design of the LAMP primers sets specific for an allelic variant using the Primer explorer V5 software (http://primerexplorer.jp/lampv5e/index.html). For each target mutation two sets of specific primers were designed, one primer set specific for the nucleotide which identifies the wild type (WT, responsible for the susceptible, S, phenotype) and one primer set specific for the nucleotide which identifies the mutated (MUT, responsible for the resistant, R, phenotype). The WT/MUT primer sets were designed using as input sequences generated during the genotyping of the twelve characterized Lolium spp. populations (Scarabel at al., Front Plant Sci 2020;11:1–12).
The sequences are reported as .abi file to be able to distinguish even heterozygous samples at the specific mutation points. The code of each sequence identifies: the origin of the sample (IT = Italy, GR = Greece, DK = Denmark), the population and plant number (e.g. 595.4, 20.7, etc.), the status of sample (wt or mut) and the number of target mutation (e.g. 197, 376, etc.).
DOI: 10.6084/m9.figshare.26596373
title: Additional file 2 of Lignin-degrading enzymes from a pathogenic canker-rot fungus Inonotus obliquus strain IO-B2

description: Additional file 2: Table. S3. Annotation of genes related to wood degradation.
DOI: 10.6084/m9.figshare.26596520
title: Additional file 9 of Transcriptome-wide mapping of milk somatic cells upon subclinical mastitis infection in dairy cattle

description: Additional file 9: Table S5. Full Maximal Clique Centralityranking of the 20 hub variables obtained with cytohubba.
DOI: 10.6084/m9.figshare.26596508.v1
title: Additional file 5 of Transcriptome-wide mapping of milk somatic cells upon subclinical mastitis infection in dairy cattle

description: Additional file 5: Table S3. Matrix of the 14,564 expressed genes obtained after filtering for counts per million &gt; 0.5 in at least 10 samples. Genes failing these criteria were removed from the exploratory and DEGs analyses.
DOI: 10.6084/m9.figshare.26596523
title: Additional file 10 of Transcriptome-wide mapping of milk somatic cells upon subclinical mastitis infection in dairy cattle

description: Additional file 10: Table S6. Predictive performances obtained through ROC analysis for the hub genes.
DOI: 10.15468/dl.f3j8n4
title: Occurrence Download

description: A dataset containing 181 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((145.047965 -36.784474, 145.047965 -36.791211, 145.045719 -36.791211, 145.045719 -36.797949, 145.043473 -36.797949, 145.043473 -36.804686, 145.050211 -36.804686, 145.050211 -36.80244, 145.052457 -36.80244, 145.052457 -36.78672, 145.054702 -36.78672, 145.054702 -36.784474, 145.047965 -36.784474))"
 ]
}

 The dataset includes 181 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066309-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26596511.v1
title: Additional file 6 of Transcriptome-wide mapping of milk somatic cells upon subclinical mastitis infection in dairy cattle

description: Additional file 6: Table S4. List of the DEGs for each experimental comparison.
DOI: 10.6084/m9.figshare.26596499.v1
title: Additional file 2 of Transcriptome-wide mapping of milk somatic cells upon subclinical mastitis infection in dairy cattle

description: Additional file 2: Table S2. Read mapping statistics of the transcriptome data before and after trimming.Quality control has been conducted using multiQC.
DOI: 10.6084/m9.figshare.26596511
title: Additional file 6 of Transcriptome-wide mapping of milk somatic cells upon subclinical mastitis infection in dairy cattle

description: Additional file 6: Table S4. List of the DEGs for each experimental comparison.
DOI: 10.6084/m9.figshare.26596499
title: Additional file 2 of Transcriptome-wide mapping of milk somatic cells upon subclinical mastitis infection in dairy cattle

description: Additional file 2: Table S2. Read mapping statistics of the transcriptome data before and after trimming.Quality control has been conducted using multiQC.
DOI: 10.6084/m9.figshare.26596496.v1
title: Additional file 1 of Transcriptome-wide mapping of milk somatic cells upon subclinical mastitis infection in dairy cattle

description: Additional file 1: Table S1. Metadata of the study.
DOI: 10.6084/m9.figshare.26596496
title: Additional file 1 of Transcriptome-wide mapping of milk somatic cells upon subclinical mastitis infection in dairy cattle

description: Additional file 1: Table S1. Metadata of the study.
DOI: 10.6084/m9.figshare.26596508
title: Additional file 5 of Transcriptome-wide mapping of milk somatic cells upon subclinical mastitis infection in dairy cattle

description: Additional file 5: Table S3. Matrix of the 14,564 expressed genes obtained after filtering for counts per million &gt; 0.5 in at least 10 samples. Genes failing these criteria were removed from the exploratory and DEGs analyses.
DOI: 10.6084/m9.figshare.26596523.v1
title: Additional file 10 of Transcriptome-wide mapping of milk somatic cells upon subclinical mastitis infection in dairy cattle

description: Additional file 10: Table S6. Predictive performances obtained through ROC analysis for the hub genes.
DOI: 10.6084/m9.figshare.26596520.v1
title: Additional file 9 of Transcriptome-wide mapping of milk somatic cells upon subclinical mastitis infection in dairy cattle

description: Additional file 9: Table S5. Full Maximal Clique Centralityranking of the 20 hub variables obtained with cytohubba.
DOI: 10.15468/dl.z4jgxy
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Fossil",
 "TaxonKey is one of (Vanda R.Br., Aerides falcata Lindl. & Paxton, Habenaria aitchisonii Rchb.f.)"
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066310-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26596430.v1
title: Additional file 1 of Completing the view – histologic insights from circular AAA specimen including 3D imaging

description: Additional file 1: Suppl. Table 1. Antibody list. Suppl. Figure 1. Sample preparation Patient 1-5. Suppl. Figure 2. Patient 1 sample acquisition and HE histomorphology. Suppl. Figure 3. Patient 1 sample acquisition, histomorphology and immunohistochemistry I. Suppl. Figure 4. Patient 1 sample acquisition, histomorphology and immunohistochemistry II. Suppl. Figure 5. Patient 1 sample acquisition, histomorphology and immunohistochemistry III. Suppl. Figure 6. Patient 1 sample acquisition, histomorphology and immunohistochemistry IV. Suppl. Figure 7. Patient 1 sample acquisition, histomorphology and immunohistochemistry V. Suppl. Figure 8. Patient 1 sample acquisition, histomorphology and immunohistochemistry VI. Suppl. Figure 9. Patient 1 sample acquisition, histomorphology and immunohistochemistry VII. Suppl. Figure 10. Patient 1 sample acquisition, histomorphology and immunohistochemistry VIII. Suppl. Figure 11. Patient 2 sample acquisition and histomorphology 1. Suppl. Figure 12. Patient 2 sample acquisition and histomorphology 2. Suppl. Figure 13. Patient 2 sample acquisition and histomorphology 4. Suppl. Figure 14. Patient 2 sample acquisition and histomorphology 5. Suppl. Figure 15. Patient 2 sample acquisition and histomorphology 6. Suppl. Figure 16. Patient 2 sample acquisition and histomorphology 7. Suppl. Figure 17. Patient 4 sample acquisition and histomorphology. Suppl. Figure 18. Patient 4 sample acquisition, histomorphology and immunohistochemistry 1. Suppl. Figure 19. Patient 4 sample acquisition, histomorphology and immunohistochemistry 2. Suppl. Figure 20. Patient 5 sample acquisition and histomorphology.
DOI: 10.15468/dl.x8tu9r
title: Occurrence Download

description: A dataset containing 35773291 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Brazil"
 ]
}

 The dataset includes 35773291 records from 4291 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019811-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3er2zf
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nerium oleander",
 "Country is Maldives",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023910-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m7q83s
title: Occurrence Download

description: A dataset containing 144 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nerium oleander",
 "Country is Malta",
 "HasCoordinate is true"
 ]
}

 The dataset includes 144 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023911-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j4qave
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nerium oleander",
 "Country is Marshall Islands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023912-250920141307145/datasets/export for details.
DOI: 10.15468/dl.763a22
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Fossil)",
 "Country is New Zealand",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Apteryx australis"
 ]
}

 The dataset includes 123 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023913-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p55jkj
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Calliandra haematocephala",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 26 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023914-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13191638
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.x5r7v7
title: Occurrence Download

description: A dataset containing 187 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Atractosteus tropicus"
 ]
}

 The dataset includes 187 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023916-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hzhyc7
title: Occurrence Download

description: A dataset containing 406 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Canavalia lineata",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 406 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023917-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wvtacg
title: Occurrence Download

description: A dataset containing 739 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Germany",
 "DatasetKey is NDFF Butterfly Data",
 "OccurrenceStatus is Present",
 "TaxonKey is Lycaenidae"
 ]
}

 The dataset includes 739 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023918-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28256138
title: All Figures and Tables OK v2.xlsx

description: Experimental Results and Tables
DOI: 10.6084/m9.figshare.28256138.v2
title: All Figures and Tables OK v2.xlsx

description: Experimental Results and Tables
DOI: 10.6084/m9.figshare.28256138.v1
title: All Figures and Tables OK v2.xlsx

description: Experimental Results and Tables
DOI: 10.15468/dl.gcnacx
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bythocaris irene"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023919-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yajk78
title: Occurrence Download

description: A dataset containing 482 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Canavalia rosea",
 "Geometry POLYGON((119.300000 20.500000, 122.100000 20.500000, 122.100000 25.400000, 119.300000 25.400000, 119.300000 20.500000))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 482 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023920-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.crbj2x
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nerium oleander",
 "Country is Nauru",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023921-250920141307145/datasets/export for details.
DOI: 10.15468/dl.ggjb3p
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nerium oleander",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023922-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.afz5pw
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nerium oleander",
 "Country is Palau",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023923-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15367949
title: Protocol for integrating immunohistochemistry and H&E annotations with Xenium data at single-cell resolution

description: Xenium outputs, H&E and IHC images, and QuPath project for "Protocol for integrating immunohistochemistry and H&E annotations with Xenium data at single-cell resolution", available here on STAR Protocols: https://star-protocols.cell.com/protocols/4486
DOI: 10.5281/zenodo.15367950
title: Protocol for integrating immunohistochemistry and H&E annotations with Xenium data at single-cell resolution

description: Xenium outputs, H&E and IHC images, and QuPath project for "Protocol for integrating immunohistochemistry and H&E annotations with Xenium data at single-cell resolution", available here on STAR Protocols: https://star-protocols.cell.com/protocols/4486
DOI: 10.5281/zenodo.17215807
title: Datos primarios del estudio perfil histopatológico del cáncer de mama en Sancti Spíritus 2023
DOI: 10.5281/zenodo.17215808
title: Datos primarios del estudio perfil histopatológico del cáncer de mama en Sancti Spíritus 2023