cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3608513_d11
title: Additional file 18: of Deep landscape update of dispersed and tandem repeats in the genome model of the red jungle fowl, Gallus gallus, using a series of de novo investigating tools

description: Graph showing thresholds calculated in permutation assays and windows calculated along chromosomes for permutation tests designed to inventory hot spots. Graphic representations about how were calculated thresholds in permutation assays and windows along chromosomes. (ODT 526 kb)
DOI: 10.6084/m9.figshare.c.3608522_d12
title: Additional file 7: of Polymorphisms and minihaplotypes in the VvNAC26 gene associate with berry size variation in grapevine

description: List of the 69 polymorphisms detected in the sequence of the VvNAC26 gene in the set of grapevine varieties analized in this study. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.c.3608582_d1
title: Additional file 1: Table S1. of Abiotic predictors and annual seasonal dynamics of Ixodes ricinus, the major disease vector of Central Europe

description: Overview of questing stages of Ixodes ricinus ticks recorded in different near-ground air temperature categories during the monitoring periods in 2001–2006. (DOCM 19 kb)
DOI: 10.6084/m9.figshare.c.3608624_d3
title: Additional file 1: Table S1. of Evolutionary loss of peroxisomes – not limited to parasites

description: Table of genomes used in the analysis with the count of assigned orthologous groups (NOGs). (XLS 59 kb)
DOI: 10.6084/m9.figshare.c.3608627_d2
title: Additional file 8: of Genome comparisons provide insights into the role of secondary metabolites in the pathogenic phase of the Photorhabdus life cycle

description: P. asymbiotica specific coding sequences. (XLSX 20Â kb)
DOI: 10.6084/m9.figshare.c.3608624_d4
title: Additional file 2: Table S2. of Evolutionary loss of peroxisomes – not limited to parasites

description: Table of peroxins identified. (XLS 677 kb)
DOI: 10.6084/m9.figshare.c.3608627_d3
title: Additional file 3: of Genome comparisons provide insights into the role of secondary metabolites in the pathogenic phase of the Photorhabdus life cycle

description: KO numbers for fully assembled genomes as assigned by the KAAS server. (XLSX 262Â kb)
DOI: 10.6084/m9.figshare.c.3608627_d4
title: Additional file 4: of Genome comparisons provide insights into the role of secondary metabolites in the pathogenic phase of the Photorhabdus life cycle

description: KEGG pathway analysis. Numbers indicate number of CDS with matching KO numbers in each pathway. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.c.3608663_d2
title: Additional file 1: of Learning to use a body-powered prosthesis: changes in functionality and kinematics

description: Read me. (TXT 17 kb)
DOI: 10.6084/m9.figshare.26207072
title: Optofluidic sorting of microparticles using Airy beams

description: Microparticle sorting is a crucial technique with diverse applications spanning biomedical research, microfluidics, and beyond. Conventional methods often face limitations in throughput, precision, and sample integrity. Here we present an optofluidic approach for size-based directional sorting of microparticles using optical manipulation with Airy beams. By harnessing the non-diffracting properties and transverse gradient force of Airy beams, we achieve a non-invasive, high-precision sorting method capable of sorting and selectively clearing microparticles based on their sizes. We also demonstrate more complex operations involving wavefront modulation and microfluidic devices. The proposed method offers effective and versatile microparticle sorting, providing a powerful optofluidic tool for applications requiring precise and efficient sorting of microparticles while maintaining sample integrity.
DOI: 10.15468/dl.fc38qx
title: Occurrence Download

description: A dataset containing 675 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Australian National Insect Collection, NSW DPI Biosecurity Collections, NatureMapr, Australian Museum provider for OZCAM, Museums Victoria provider for OZCAM, Queensland Museum provider for OZCAM, Earth Guardians Weekly Feed, ALA species sightings and OzAtlas, Zoology (Museum of Evolution - Uppsala))",
 "TaxonKey is Anoplognathus brunnipennis (Gyllenhal, 1817)"
 ]
}

 The dataset includes 675 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033089-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3608723_d3
title: MOESM1 of A proteomic evaluation of urinary changes associated with cardiopulmonary bypass

description: Additional file 1: Table S1. The use of custom retention alignment peptides to map peptide retention times from 2D DDA/IDA runs into the SWATH extraction library, and their corresponding SWATH extracted retention times.
DOI: 10.6084/m9.figshare.c.3608732_d1
title: MOESM6 of DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding analyses

description: Additional file 6. Taxonomic identification. This file contains the number of unique sequences from each identified taxon from sample pA1 from dataset 2.
DOI: 10.6084/m9.figshare.c.3608711_d4
title: Additional file 9: of Heritable gene expression differences between apomictic clone members in Taraxacum officinale: Insights into early stages of evolutionary divergence in asexual plants

description: Read mapping statistics of the SNP analysis on the reference de novo transcriptome assembly per accession. (RTF 59Â kb)
DOI: 10.6084/m9.figshare.c.3608723_d4
title: MOESM4 of A proteomic evaluation of urinary changes associated with cardiopulmonary bypass

description: Additional file 4: Table S4. Correlation filtered 2D DDA/IDA and SWATH protein difference values.
DOI: 10.6084/m9.figshare.c.3608711_d5
title: Additional file 7: of Heritable gene expression differences between apomictic clone members in Taraxacum officinale: Insights into early stages of evolutionary divergence in asexual plants

description: Genes highly connected from overall differentially expressed greenhouse genes (67 genes); in grey, DEGs unique to greenhouse conditions (in white common in both experiments). Annotations and functions were retrieved from the TAIR website ( www.arabidopsis.org ). (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3608741_d1
title: Additional file 3: of Sudden death due to paralysis and synaptic and behavioral deficits when Hip14/Zdhhc17 is deleted in adult mice

description: One-way and two-way ANOVA values and replicates. (XLSX 40Â kb)
DOI: 10.6084/m9.figshare.c.3608744_d1
title: MOESM2 of The effect of DNA extraction methodology on gut microbiota research applications

description: Additional file 2: Table S1. Sample raw data of read qualities and read lengths after each step of the pipeline and before OTUs construction.
DOI: 10.6084/m9.figshare.c.3608747_d1
title: Additional file 1: Table S1. of A method for automated pathogenic content estimation with application to rheumatoid arthritis

description: Human bacteria pathogens in a Genus-Species table collected from six public database and manual searching, this table is integral to the eudysbiome package, reported here for convenience. (XLSX 73 kb)
DOI: 10.6084/m9.figshare.c.3608732_d3
title: MOESM4 of DAMe: a toolkit for the initial processing of datasets with PCR replicates of double-tagged amplicons for DNA metabarcoding analyses

description: Additional file 4. RSI values. This file contains the RSI values from datasets 1 and 2.
DOI: 10.6084/m9.figshare.c.3608711_d6
title: Additional file 2: of Heritable gene expression differences between apomictic clone members in Taraxacum officinale: Insights into early stages of evolutionary divergence in asexual plants

description: Mapping results of ERCC spike-in control and correlations with theoretical concentrations. (XLSX 62Â kb)
DOI: 10.15468/dl.rwwc33
title: Occurrence Download

description: A dataset containing 723757 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-122.28349 19.04842,-108.602 21.48306,-127.16042 51.12754,-134.77827 50.89786,-122.28349 19.04842))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pelecanus occidentalis Linnaeus, 1766"
 ]
}

 The dataset includes 723757 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033080-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bvzr38
title: Occurrence Download

description: A dataset containing 12840 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thalassiosiraceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 12840 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033088-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13751702
title: Test-C2SafeRust: Translating C to Safe  Rust via incorporating In-context Learning and Program Structures into LLM

description: This is a tool for translating C to safe Rust via incorporating In-context Learning and Program Structures into LLM.
DOI: 10.5281/zenodo.13751703
title: Test-C2SafeRust: Translating C to Safe  Rust via incorporating In-context Learning and Program Structures into LLM

description: This is a tool for translating C to safe Rust via incorporating In-context Learning and Program Structures into LLM.
DOI: 10.5281/zenodo.13773176
title: C2SafeRust: Translating C to Safe  Rust via incorporating In-context Learning and Program Structures into LLM

description: This repository contains the code and dataset for the paper C2SafeRust: Translating C to Safe Rust via Incorporating In-Context Learning and Program Structures into LLM in FSE 2025.

C2SafeRust is an advanced tool designed to automatically translate C code into safe, readable, and maintainable Rust code. Leveraging in-context learning (ICL), C2SafeRust generates idiomatic Rust that adheres to Rust's safety guarantees. The tool employs detailed program structures, such as Control Flow Graphs (CFG) and Data Dependency Graphs (DDG), along with intermediate variable values obtained through program instrumentation. By integrating these elements with a Large Language Model (LLM), C2SafeRust ensures high syntactic and semantic correctness in the translation process, while maintaining the readability and maintainability of the resulting Rust code.
DOI: 10.5281/zenodo.13773177
title: C2SafeRust: Translating C to Safe  Rust via incorporating In-context Learning and Program Structures into LLM

description: This repository contains the code and dataset for the paper C2SafeRust: Translating C to Safe Rust via Incorporating In-Context Learning and Program Structures into LLM in FSE 2025.

C2SafeRust is an advanced tool designed to automatically translate C code into safe, readable, and maintainable Rust code. Leveraging in-context learning (ICL), C2SafeRust generates idiomatic Rust that adheres to Rust's safety guarantees. The tool employs detailed program structures, such as Control Flow Graphs (CFG) and Data Dependency Graphs (DDG), along with intermediate variable values obtained through program instrumentation. By integrating these elements with a Large Language Model (LLM), C2SafeRust ensures high syntactic and semantic correctness in the translation process, while maintaining the readability and maintainability of the resulting Rust code.
DOI: 10.5281/zenodo.13756259
title: C2SafeRust: Translating C to Safe  Rust via incorporating In-context Learning and Program Structures into LLM

description: This repository contains the code and dataset for the paper C2SafeRust: Translating C to Safe Rust via Incorporating In-Context Learning and Program Structures into LLM in FSE 2025.

C2SafeRust is an advanced tool designed to automatically translate C code into safe, readable, and maintainable Rust code. Leveraging in-context learning (ICL), C2SafeRust generates idiomatic Rust that adheres to Rust's safety guarantees. The tool employs detailed program structures, such as Control Flow Graphs (CFG) and Data Dependency Graphs (DDG), along with intermediate variable values obtained through program instrumentation. By integrating these elements with a Large Language Model (LLM), C2SafeRust ensures high syntactic and semantic correctness in the translation process, while maintaining the readability and maintainability of the resulting Rust code.
DOI: 10.5281/zenodo.13756260
title: C2SafeRust: Translating C to Safe  Rust via incorporating In-context Learning and Program Structures into LLM

description: This repository contains the code and dataset for the paper C2SafeRust: Translating C to Safe Rust via Incorporating In-Context Learning and Program Structures into LLM in FSE 2025.

C2SafeRust is an advanced tool designed to automatically translate C code into safe, readable, and maintainable Rust code. Leveraging in-context learning (ICL), C2SafeRust generates idiomatic Rust that adheres to Rust's safety guarantees. The tool employs detailed program structures, such as Control Flow Graphs (CFG) and Data Dependency Graphs (DDG), along with intermediate variable values obtained through program instrumentation. By integrating these elements with a Large Language Model (LLM), C2SafeRust ensures high syntactic and semantic correctness in the translation process, while maintaining the readability and maintainability of the resulting Rust code.
DOI: 10.6084/m9.figshare.c.3608870_d5
title: Additional file 4: of Wheat germ-based protein libraries for the functional characterisation of the Arabidopsis E2 ubiquitin conjugating enzymes and the RING-type E3 ubiquitin ligase enzymes

description: List of primers employed for the construction of transcription templates for Arabidopsis E2s and RING protein. (XLSX 42 kb)
DOI: 10.6084/m9.figshare.c.3608873_d4
title: Additional file 3: Table S3. of Preliminary analysis of Psoroptes ovis transcriptome in different developmental stages

description: The frequency distribution of splice length. (XLSX 9Â kb)
DOI: 10.15468/dl.hjumhg
title: Occurrence Download

description: A dataset containing 96405 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Denmark",
 "TaxonKey is Branta leucopsis (Bechstein, 1803)",
 "Year 2020-2024"
 ]
}

 The dataset includes 96405 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033087-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3608888_d1
title: Additional file 1: of Womenâ  s experience with home-based self-sampling for human papillomavirus testing

description: HPV Self-Sampling Survey. (ZIP 115 kb)
DOI: 10.6084/m9.figshare.c.3608873_d5
title: Additional file 2: Table S2. of Preliminary analysis of Psoroptes ovis transcriptome in different developmental stages

description: The quality of transcriptome data. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3608873_d12
title: Additional file 10: Table S8. of Preliminary analysis of Psoroptes ovis transcriptome in different developmental stages

description: The enrichment results of upregulated DEGs in KEGG pathways. (XLSX 20Â kb)
DOI: 10.6084/m9.figshare.c.3608873_d13
title: Additional file 17: Table S14. of Preliminary analysis of Psoroptes ovis transcriptome in different developmental stages

description: Allergen genes which did not result in Blast hits with genes from other mites or ticks among the upregulated DEGs. (XLSX 13Â kb)
DOI: 10.15468/dl.xwtupg
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chenopodiastrum coronopus (Moq.) S.Fuentes, Uotila & Borsch"
 ]
}

 The dataset includes 72 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033090-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3608873_d14
title: Additional file 14: Table S11. of Preliminary analysis of Psoroptes ovis transcriptome in different developmental stages

description: Allergen genes which resulted in Blast hits with genes from other mites and ticks among the unigenes of P. ovis in the two developmental stages. (XLSX 20Â kb)
DOI: 10.6084/m9.figshare.c.3608933_d1
title: Additional file 2: of Complete genome sequence of and proposal of Thermofilum uzonense sp. nov. a novel hyperthermophilic crenarchaeon and emended description of the genus Thermofilum

description: Biosynthetic COGs. List of biosynthetic COGs among Thermofilum representatives with sequenced genomes. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3608975_d4
title: Additional file 3: of Integrative phenotyping framework (iPF): integrative clustering of multiple omics data identifies novel lung disease subphenotypes

description: This file includes 669 clinical variables analyzed in this paper. (XLSX 45Â kb)
DOI: 10.5281/zenodo.14392547
title: IGN Train and Validation Data for ICDAR'25 MapText Competition

description: Data set of 2Kx2K image tiles cropped from Napoleonic Cadastre maps of the Val de Marne Archive for the ICDAR'25 Competition on Historical Map Text Detection, Recognition, and Linking.

Annotations and images follow the format described at the competition website and can be evaluated using the official evaluation repository script.

This dataset is a superset of the dataset used in the 2024 edition: the first 80 image from the training set, and the first 15 images from the validation set are the same as the version 1.1 of the IGN Train and Validation Data for ICDAR'24 MapText Competition. However, minor issues in their annotations may have been fixed, so you should use this new dataset instead.

Please note the we also provide an extra synthetic dataset for training, which is released under a different record: "IGN Synthetic Train Data for ICDAR'25 MapText Competition" (10.5281/zenodo.14394546).




 
Train
Validation


Annotations
ign25_train.json
ign25_val.json


Images
train.zip
val.zip


Files
ign25/train/*.jpg
ign25/val/*.jpg


Tiles
228
25


Map Sheets
78
12


Words
25,564
2,725


Label Groups
23,542
2,413


Illegible Words
1,684
274


Truncated Words
1,351
129


Valid Words
23,880
2,451




Original images available at https://archives.valdemarne.fr/recherches/archives-en-ligne/cadastre-napoleonien as of 11 Dec. 2024.
DOI: 10.6084/m9.figshare.c.3609002_d1
title: Additional file 1: Table S1. of CAP protein superfamily members in Toxocara canis

description: CAP protein-encoding genes of Toxocara canis. For each predicted protein, the genomic scaffolds to which they map, including the length of the inferred amino acid sequences and InterProScan matches (including domains, motifs and signal peptides), are shown. Table S2. Pairwise comparisons of 28 predicted Toxocara canis CAP protein sequences with homologs in Caenorhabditis elegans and parasitic nematodes including Ascaris lumbricoides (Al), Anisakis simplex (As), Ascaris suum (Asu), Brugia malayi (Bm), Caenorhabditis japonica (Cj), Caenorhabditis sinica (Cs), Dirofilaria immitis (Di), Dracunculus medinensis (Dm), Elaeophora elaphi (Ee), Enterobius vermicularis (Ev), Loa loa (Ll), Litomosoides sigmodontis (Ls), Oesophagostomum dentatum (Od), Onchocerca ochengi (Oo), Onchocerca volvulus (Ov), Parascaris equorum (Pe), Panagrellus redivivus (Pr), Steinernema carpocapsae (Sc), Steinernema feltiae (Sf), Steinernema glaseri (Sg), Syphacia muris (Sm), Steinernema monticolum (Smo), Steinernema scapterisci (Ss) and Thelazia callipaeda (Tc), with gene identification (ID) and identity (%) indicated in brackets. Table S3. Toxocara canis cap genes (Tc-cap) differentially transcribed (upregulated; log2-fold change: &gt; 2) in individual life stages/sexes/tissues (pairwise comparisons). Table S4. Transcription of Toxocara canis cap genes (Tc-cap) in different life stages/sexes/tissues. Values are transcripts per million (TPM). (XLSX 44Â kb)
DOI: 10.6084/m9.figshare.c.3608975_d5
title: Additional file 2: of Integrative phenotyping framework (iPF): integrative clustering of multiple omics data identifies novel lung disease subphenotypes

description: This file includes GSM IDs of GSE47460 that were collected to analyze in this paper. (XLSX 43Â kb)
DOI: 10.15468/dl.45wead
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thallassiosiraceae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 39 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033091-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3609062_d2
title: Additional file 3: of Peer-instructed seminar attendance is associated with improved preparation, deeper learning and higher exam scores: a survey study

description: Raw data collected via questionnaires. (XLSX 72 kb)
DOI: 10.6084/m9.figshare.c.3609047_d5
title: Additional file 7: Table S3. of Transcriptome profiling of a spirodiclofen susceptible and resistant strain of the European red mite Panonychus ulmi using strand-specific RNA-seq

description: Annotation details and accession numbers of Cytochrome P450s. (XLSX 154 kb)
DOI: 10.6084/m9.figshare.c.3609047_d6
title: Additional file 18: Table S10. of Transcriptome profiling of a spirodiclofen susceptible and resistant strain of the European red mite Panonychus ulmi using strand-specific RNA-seq

description: Differentially expressed contigs in the P. ulmi PSR-TK strain with a BLASTx (E-value treshold e-15) hit against amino acid translations of differentially expressed genes in SR-VP and SR-TK, two spirodiclofen resistant T. urticae strains [20]. (XLSX 48 kb)
DOI: 10.15468/dl.zn4vau
title: Occurrence Download

description: A dataset containing 1402 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Denmark",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than 50000",
 "Year is 2023",
 "DecimalLongitude is greater than or equal to 10.04",
 "DecimalLongitude is less than or equal to 10.15",
 "DecimalLatitude is greater than or equal to 55.84",
 "DecimalLatitude is less than or equal to 55.87"
 ]
}

 The dataset includes 1402 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033092-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3609047_d19
title: Additional file 2: File S1. of Transcriptome profiling of a spirodiclofen susceptible and resistant strain of the European red mite Panonychus ulmi using strand-specific RNA-seq

description: Complete transcriptome assembly of P. citri reassembled from raw reads data [33]. (Format: FASTA, examination of this file requires the BioEdit program available at http://www.mbio.ncsu.edu/bioedit/bioedit.html . (FAS 19163 kb)
DOI: 10.6084/m9.figshare.c.3609047_d20
title: Additional file 1: Table S1. of Transcriptome profiling of a spirodiclofen susceptible and resistant strain of the European red mite Panonychus ulmi using strand-specific RNA-seq

description: Alignment summary for the CLC and Velvet/Oases assemblies. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3609197_d4
title: Additional file 1: of Differential expression of small RNAs under chemical stress and fed-batch fermentation in E. coli

description: RNA sequencing information. (XLSX 11 kb)