cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3422665.v1
title: Potential involvement of drought-induced Ran GTPase <i>CLRan1</i> in root growth enhancement in a xerophyte wild watermelon

description: Enhanced root growth is known as the survival strategy of plants under drought. Previous proteome analysis in drought-resistant wild watermelon has shown that Ran GTPase, an essential regulator of cell division and proliferation, was induced in the roots under drought. In this study, two cDNAs were isolated from wild watermelon, <i>CLRan1</i> and <i>CLRan2</i>, which showed a high degree of structural similarity with those of other plant Ran GTPases. Quantitative RT-PCR and promoter-GUS assays suggested that <i>CLRan1</i> was expressed mainly in the root apex and lateral root primordia, whereas <i>CLRan2</i> was more broadly expressed in other part of the roots. Immunoblotting analysis confirmed that the abundance of CLRan proteins was elevated in the root apex region under drought stress. Transgenic Arabidopsis overexpressing CLRan1 showed enhanced primary root growth, and the growth was maintained under osmotic stress, indicating that <i>CLRan1</i> functions as a positive factor for maintaining root growth under stress conditions. Ran GTPase (CLRan1), which is expressed in the roots of drought-resistant wild watermelon, functions as a positive factor for maintaining root growth under osmotic stress.
DOI: 10.6084/m9.figshare.3422662
title: How Personality affects Vulnerability among Israelis and Palestinians Following the 2009 Gaza Conflict

description: Data for paper "How Personality affects Vulnerability among Israelis and Palestinians Following the 2009 Gaza Conflict<br>".<br>
DOI: 10.6084/m9.figshare.3422662.v1
title: How Personality affects Vulnerability among Israelis and Palestinians Following the 2009 Gaza Conflict

description: Data for paper "How Personality affects Vulnerability among Israelis and Palestinians Following the 2009 Gaza Conflict<br>".<br>
DOI: 10.6084/m9.figshare.3422659
title: Development of a promoter shutoff system in <i>Aspergillus oryzae</i> using a sorbitol-sensitive promoter

description: Promoter shutoff is a general method for analyzing essential genes, but in the fungus <i>Aspergillus oryzae</i>, no tightly repressed promoters have been reported. To overcome the current limitations of conditional promoters, we examined sorbitol- and galactose-responsive genes using microarrays to identify regulatable genes with only minor physiological and genetic effects. We identified two sorbitol-induced genes (designated as <i>sorA</i> and <i>sorB</i>), cloned their promoters, and built a regulated <i>egfp</i> and <i>brlA</i> expression system. Growth medium-dependent enhanced green fluorescence protein (EGFP) fluorescence and conidiation were confirmed for <i>egfp</i> and <i>brlA</i> under the control of their respective promoters. We also used this shutoff system to regulate the essential <i>rhoA</i>, which demonstrated the expected growth inhibition under repressed growth conditions. Our new sorbitol promoter shutoff system developed can serve as a valuable new tool for essential gene analyses of filamentous fungi. A sorbitol-responsive promoter shutoff system was evaluated for <i>egfp</i> and essential <i>rhoA</i> expression controlled with P<i>sorA</i> and P<i>sorB</i> in <i>A. oryzae</i>.
DOI: 10.6084/m9.figshare.3422659.v1
title: Development of a promoter shutoff system in <i>Aspergillus oryzae</i> using a sorbitol-sensitive promoter

description: Promoter shutoff is a general method for analyzing essential genes, but in the fungus <i>Aspergillus oryzae</i>, no tightly repressed promoters have been reported. To overcome the current limitations of conditional promoters, we examined sorbitol- and galactose-responsive genes using microarrays to identify regulatable genes with only minor physiological and genetic effects. We identified two sorbitol-induced genes (designated as <i>sorA</i> and <i>sorB</i>), cloned their promoters, and built a regulated <i>egfp</i> and <i>brlA</i> expression system. Growth medium-dependent enhanced green fluorescence protein (EGFP) fluorescence and conidiation were confirmed for <i>egfp</i> and <i>brlA</i> under the control of their respective promoters. We also used this shutoff system to regulate the essential <i>rhoA</i>, which demonstrated the expected growth inhibition under repressed growth conditions. Our new sorbitol promoter shutoff system developed can serve as a valuable new tool for essential gene analyses of filamentous fungi. A sorbitol-responsive promoter shutoff system was evaluated for <i>egfp</i> and essential <i>rhoA</i> expression controlled with P<i>sorA</i> and P<i>sorB</i> in <i>A. oryzae</i>.
DOI: 10.6084/m9.figshare.3422656
title: Breve itinerario acerca de las teorías civiles de la personalidad jurídica. Su impacto en el common law y en el levantamiento del velo societario

description: En este artículo el autor, partiendo de un contexto histórico preliminar, nos permite analizar el surgimiento de la personalidad jurídica, las teorías que la desarrollan y el concepto de la misma. Además desarrolla claramente el concepto de velo societario y su calificacion jurídica. Finalmente expone un breve análisis en relación a la propuesta de reforma al Código Civil presentada en el 2006."<br><b>Autor(es): </b><b>Saavedra Velazco,Renzo E.</b><b>Revista: </b><b>Derecho &Sociedad</b> (2079-3634)<b>Fecha de publicación: Enero 2011</b><br><b>URL: </b>http://hdl.handle.net/10757/604684<b>PDF: </b>Texto completo/Full text
DOI: 10.6084/m9.figshare.3422656.v1
title: Breve itinerario acerca de las teorías civiles de la personalidad jurídica. Su impacto en el common law y en el levantamiento del velo societario

description: En este artículo el autor, partiendo de un contexto histórico preliminar, nos permite analizar el surgimiento de la personalidad jurídica, las teorías que la desarrollan y el concepto de la misma. Además desarrolla claramente el concepto de velo societario y su calificacion jurídica. Finalmente expone un breve análisis en relación a la propuesta de reforma al Código Civil presentada en el 2006."<br><b>Autor(es): </b><b>Saavedra Velazco,Renzo E.</b><b>Revista: </b><b>Derecho &Sociedad</b> (2079-3634)<b>Fecha de publicación: Enero 2011</b><br><b>URL: </b>http://hdl.handle.net/10757/604684<b>PDF: </b>Texto completo/Full text
DOI: 10.6084/m9.figshare.3422362
title: Resume Research Findings

description: Findings and IRB approval for resume research as part of Iowa State University's Honors Capstone project. <br>
DOI: 10.6084/m9.figshare.3422347
title: A new reptile from the Richards Spur locality, Oklahoma, U.S.A., and patterns of Early Permian parareptile diversification

description: The Lower Permian Richards Spur locality is the most speciose Paleozoic continental vertebrate assemblage currently known, and a significant proportion of the tetrapod diversity found at the locality is made up of parareptiles. The first Richards Spur parareptile to be described was <i>Colobomycter pholeter</i>. It has been characterized by its enlarged premaxillary tooth and paired enlarged maxillary teeth, unique dentition that grants it an appearance quite distinct from other parareptiles at Richards Spur. Here we describe new cranial material from Richards Spur that is referable to <i>Colobomycter</i>. This new material differs from that of <i>C. pholeter</i> in that it possesses at least three more teeth on its maxilla, the enlarged premaxillary and maxillary teeth are more gracile than those in <i>C. pholeter</i>, and the lacrimal is restricted externally to the orbital margin and does not exhibit an extra lateral exposure. We infer that these differences merit specific distinction and assign the new fossil to <i>Colobomycter vaughni</i>, sp. nov. The discovery of <i>C. vaughni</i> at Richards Spur is important, because it reveals the presence of another member of the clade Lanthanosuchoidea in Oklahoma, making it the sixth to be found in the state. The large number of taxa from this clade found in Oklahoma suggests that during the Early Permian, this area of western Laurasia was the center of a radiation of small, predatory lanthanosuchoids. http://zoobank.org/urn:lsid:zoobank.org:pub:149450CF-4CB8-4099-B037-7E371A5AB286 SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at www.tandfonline.com/UJVP Citation for this article: MacDougall, M. J., S. P. Modesto, and R. R. Reisz. 2016. A new reptile from the Richards Spur locality, Oklahoma, U.S.A., and patterns of Early Permian parareptile diversification. Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2016.1179641.
DOI: 10.6084/m9.figshare.3422347.v2
title: A new reptile from the Richards Spur locality, Oklahoma, U.S.A., and patterns of Early Permian parareptile diversification

description: The Lower Permian Richards Spur locality is the most speciose Paleozoic continental vertebrate assemblage currently known, and a significant proportion of the tetrapod diversity found at the locality is made up of parareptiles. The first Richards Spur parareptile to be described was <i>Colobomycter pholeter</i>. It has been characterized by its enlarged premaxillary tooth and paired enlarged maxillary teeth, unique dentition that grants it an appearance quite distinct from other parareptiles at Richards Spur. Here we describe new cranial material from Richards Spur that is referable to <i>Colobomycter</i>. This new material differs from that of <i>C. pholeter</i> in that it possesses at least three more teeth on its maxilla, the enlarged premaxillary and maxillary teeth are more gracile than those in <i>C. pholeter</i>, and the lacrimal is restricted externally to the orbital margin and does not exhibit an extra lateral exposure. We infer that these differences merit specific distinction and assign the new fossil to <i>Colobomycter vaughni</i>, sp. nov. The discovery of <i>C. vaughni</i> at Richards Spur is important, because it reveals the presence of another member of the clade Lanthanosuchoidea in Oklahoma, making it the sixth to be found in the state. The large number of taxa from this clade found in Oklahoma suggests that during the Early Permian, this area of western Laurasia was the center of a radiation of small, predatory lanthanosuchoids. http://zoobank.org/urn:lsid:zoobank.org:pub:149450CF-4CB8-4099-B037-7E371A5AB286 SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at www.tandfonline.com/UJVP Citation for this article: MacDougall, M. J., S. P. Modesto, and R. R. Reisz. 2016. A new reptile from the Richards Spur locality, Oklahoma, U.S.A., and patterns of Early Permian parareptile diversification. Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2016.1179641.
DOI: 10.6084/m9.figshare.3422347.v1
title: A new reptile from the Richards Spur Locality, Oklahoma, USA, and patterns of Early Permian parareptile diversification

description: The Lower Permian Richards Spur locality is the most speciose Paleozoic continental vertebrate assemblage currently known, and a significant proportion of the tetrapod diversity found at the locality is made up of parareptiles. The first Richards Spur parareptile to be described was <i>Colobomycter pholeter</i>. It has been characterized by its enlarged premaxillary tooth and paired enlarged maxillary teeth, unique dentition that grants it an appearance quite distinct from other parareptiles at Richards Spur. Here we describe new cranial material from Richards Spur that is referable to <i>Colobomycter</i>. This new material differs from that of <i>C. pholeter</i> in that it possesses at least three more teeth on its maxilla, the enlarged premaxillary and maxillary teeth are more gracile than those in <i>C. pholeter</i>, and the lacrimal is restricted externally to the orbital margin and does not exhibit an extra lateral exposure. We infer that these differences merit specific distinction and assign the new fossil to <i>Colobomycter vaughni</i>, sp. nov. The discovery of <i>C. vaughni</i> at Richards Spur is important, because it reveals the presence of another member of the clade Lanthanosuchoidea in Oklahoma, making it the sixth to be found in the state. The large number of taxa from this clade found in Oklahoma suggests that during the Early Permian, this area of western Laurasia was the center of a radiation of small, predatory lanthanosuchoids. http://zoobank.org/urn:lsid:zoobank.org:pub:149450CF-4CB8-4099-B037-7E371A5AB286 SUPPLEMENTAL DATA—Supplemental materials are available for this article for free at www.tandfonline.com/UJVP Citation for this article: MacDougall, M. J., S. P. Modesto, and R. R. Reisz. 2016. A new reptile from the Richards Spur locality, Oklahoma, U.S.A., and patterns of Early Permian parareptile diversification. Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2016.1179641.
DOI: 10.6084/m9.figshare.3422344
title: 00- Supplementary Data-One PDF.pdf

description: The expression of maps of extended RAAS, including 37 genes, in 23 different tissues/organs.<br>
DOI: 10.6084/m9.figshare.3422344.v1
title: 00- Supplementary Data-One PDF.pdf

description: The expression of maps of extended RAAS, including 37 genes, in 23 different tissues/organs.<br>
DOI: 10.6084/m9.figshare.3422272
title: R script to obtain continuous estimates of whole-stream metabolism

description: Generating daily estimates of WSM. We show the procedure to generate daily estimates of one station whole-stream metabolism using water, reach and weather data for the period of interest. Read the "Supplemental_Text_S4.pdf" for detailed description of the Daily.Metabolism.R script.
DOI: 10.6084/m9.figshare.3422272.v1
title: R script to obtain continuous estimates of whole-stream metabolism

description: Generating daily estimates of WSM. We show the procedure to generate daily estimates of one station whole-stream metabolism using water, reach and weather data for the period of interest. Read the "Supplemental_Text_S4.pdf" for detailed description of the Daily.Metabolism.R script.
DOI: 10.6084/m9.figshare.3422083
title: Chromosome fusions triggered by noncoding RNA

description: Chromosomal fusions are common in normal and cancer cells and can produce aberrant gene products that promote transformation. The mechanisms driving these fusions are poorly understood, but recurrent fusions are widespread. This suggests an underlying mechanism, and some authors have proposed a possible role for RNA in this process. The unicellular eukaryote <i>Oxytricha trifallax</i> displays an exorbitant capacity for natural genome editing, when it rewrites its germline genome to form a somatic epigenome. This developmental process provides a powerful model system to directly test the influence of small noncoding RNAs on chromosome fusion events during somatic differentiation. Here we show that small RNAs are capable of inducing chromosome fusions in 4 distinct cases (out of 4 tested), including one fusion of 3 chromosomes. We further show that these RNA-mediated chromosome fusions are heritable over multiple sexual generations and that transmission of the acquired fusion is associated with endogenous production of novel piRNA molecules that target the fused junction. We also demonstrate the capacity of a long noncoding RNA (lncRNA) to induce chromosome fusion of 2 distal germline loci. These results underscore the ability of short-lived, aberrant RNAs to act as drivers of chromosome fusion events that can be stably transmitted to future generations.
DOI: 10.6084/m9.figshare.3422083.v1
title: Chromosome fusions triggered by noncoding RNA

description: Chromosomal fusions are common in normal and cancer cells and can produce aberrant gene products that promote transformation. The mechanisms driving these fusions are poorly understood, but recurrent fusions are widespread. This suggests an underlying mechanism, and some authors have proposed a possible role for RNA in this process. The unicellular eukaryote <i>Oxytricha trifallax</i> displays an exorbitant capacity for natural genome editing, when it rewrites its germline genome to form a somatic epigenome. This developmental process provides a powerful model system to directly test the influence of small noncoding RNAs on chromosome fusion events during somatic differentiation. Here we show that small RNAs are capable of inducing chromosome fusions in 4 distinct cases (out of 4 tested), including one fusion of 3 chromosomes. We further show that these RNA-mediated chromosome fusions are heritable over multiple sexual generations and that transmission of the acquired fusion is associated with endogenous production of novel piRNA molecules that target the fused junction. We also demonstrate the capacity of a long noncoding RNA (lncRNA) to induce chromosome fusion of 2 distal germline loci. These results underscore the ability of short-lived, aberrant RNAs to act as drivers of chromosome fusion events that can be stably transmitted to future generations.
DOI: 10.6084/m9.figshare.3422047
title: Empathic Accuracy and Observed Demand Behavior in Couples

description: <i>Data associated with the article: <br> "Empathic Accuracy and </i><i>Observed </i><i>Demand Behavior in Couples" (Hinnekens, C., Vanhee, G., De Schryver, M., & Verhofstadt, L.); submitted to Frontiers in Psychology.</i><i><br></i>
DOI: 10.6084/m9.figshare.3422047.v1
title: Empathic Accuracy and Observed Demand Behavior in Couples

description: <i>Data associated with the article: <br> "Empathic Accuracy and </i><i>Observed </i><i>Demand Behavior in Couples" (Hinnekens, C., Vanhee, G., De Schryver, M., & Verhofstadt, L.); submitted to Frontiers in Psychology.</i><i><br></i>
DOI: 10.5281/zenodo.4014726
title: Supplement to : Accelerated Snow Melt in the Russian Caucasus Mountains After the Saharan Dust Outbreak in March 2018

description: These datasets contains all the data used in Accelerated Snow Melt in the Russian Caucasus Mountains After the Saharan Dust Outbreak in March 2018 by Dumont et al., in Journal of Geophysical Research.<br> This dataset includes : Sentinel-2 cloud masks, snow depth measurements, snow surface impurity content estimated from Sentinel-2, Sentinel-2 surface reflectances and digital elevation models. Dumont, M., Tuzet, F., Gascoin, S., Picard, G., Kutuzov, S., Lafaysse, M., et al. (2020). Accelerated snow melt in the Russian Caucasus mountains after the Saharan dust outbreak in March 2018. Journal of Geophysical Research: Earth Surface, 125, e2020JF005641. https://doi.org/10.1029/2020JF005641
DOI: 10.5281/zenodo.4014725
title: Supplement to : Accelerated Snow Melt in the Russian Caucasus Mountains After the Saharan Dust Outbreak in March 2018

description: These datasets contains all the data used in Accelerated Snow Melt in the Russian Caucasus Mountains After the Saharan Dust Outbreak in March 2018 by Dumont et al., in Journal of Geophysical Research.<br> This dataset includes : Sentinel-2 cloud masks, snow depth measurements, snow surface impurity content estimated from Sentinel-2, Sentinel-2 surface reflectances and digital elevation models. Dumont, M., Tuzet, F., Gascoin, S., Picard, G., Kutuzov, S., Lafaysse, M., et al. (2020). Accelerated snow melt in the Russian Caucasus mountains after the Saharan dust outbreak in March 2018. Journal of Geophysical Research: Earth Surface, 125, e2020JF005641. https://doi.org/10.1029/2020JF005641
DOI: 10.6084/m9.figshare.3421951
title: R-Shiny explore H3N2 features

description: A web interface made using R Shiny to evaluate datasets and prediction models.
DOI: 10.6084/m9.figshare.3421951.v2
title: R-Shiny explore H3N2 features

description: A web interface made using R Shiny to evaluate datasets and prediction models.
DOI: 10.6084/m9.figshare.3421951.v1
title: R-Shiny explore H3N2 features

description: A web interface made using R Shiny to evaluate datasets and prediction models.
DOI: 10.6084/m9.figshare.3421885
title: In vivo tracking of macrophages after stroke

description: These are the raw data files for all the figures of the publication Marion Selt et al in PLOS ONE
DOI: 10.6084/m9.figshare.3421885.v3
title: In vivo tracking of macrophages after stroke

description: These are the raw data files for all the figures of the publication Marion Selt et al in PLOS ONE
DOI: 10.6084/m9.figshare.3421885.v2
title: Data for PLOS ONE repository.zip

description: These are the raw data files for all the figures of the publication Marion Selt et al in PLOS ONE
DOI: 10.6084/m9.figshare.3421006
title: Insights into the transcriptional and translational mechanisms of linear organellar chromosomes in the box jellyfish <i>Alatina alata</i> (Cnidaria: Medusozoa: Cubozoa)

description: Background: In most animals, the mitochondrial genome is characterized by its small size, organization into a single circular molecule, and a relative conservation of the number of encoded genes. In box jellyfish (Cubozoa, Cnidaria), the mitochondrial genome is organized into 8 linear mito-chromosomes harboring between one and 4 genes each, including 2 extra protein-coding genes: <i>mt-polB</i> and <i>orf314</i>. Such an organization challenges the traditional view of mitochondrial DNA (mtDNA) expression in animals. In this study, we investigate the pattern of mitochondrial gene expression in the box jellyfish <i>Alatina alata</i>, as well as several key nuclear-encoded molecular pathways involved in the processing of mitochondrial gene transcription. Results: Read coverage of DNA-seq data is relatively uniform for all 8 mito-chromosomes, suggesting that each mito-chromosome is present in equimolar proportion in the mitochondrion. Comparison of DNA and RNA-seq based assemblies indicates that mito-chromosomes are transcribed into individual transcripts in which the beginning and ending are highly conserved. Expression levels for <i>mt-polB</i> and <i>orf314</i> are similar to those of other mitochondrial-encoded genes, which provides further evidence for them having functional roles in the mitochondrion. Survey of the transcriptome suggests recognition of the mitochondrial tRNA-Met by the cytoplasmic aminoacyl-tRNA synthetase counterpart and C-to-U editing of the cytoplasmic tRNA-Trp after import into the mitochondrion. Moreover, several mitochondrial ribosomal proteins appear to be lost. Conclusions: This study represents the first survey of mitochondrial gene expression of the linear multi-chromosomal mtDNA in box jellyfish (Cubozoa). Future exploration of small RNAs and the proteome of the mitochondrion will test the hypotheses presented herein.