cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21315771.v2
title: data

description: stress strain curves
DOI: 10.6084/m9.figshare.22285444.v1
title: MN47v2 genome assembly

description: MN47v2 <em>Arabidopsis lyrata </em>genome assembly
DOI: 10.6084/m9.figshare.28141520.v3
title: TableS1.xlsx

description: Supplementary data for Using speleothem <sup>87</sup>Sr/<sup>86</sup>Sr variations tracking the controls on trace element (Sr–Mg) compositions
DOI: 10.6084/m9.figshare.29149916.v1
title: Datadir1: Best poses

description: Docking results (.pdb)
DOI: 10.17632/7zgtht6f3f
title: LV NSCs Carbachol Versus Control

description: This dataset comprises RNA-seq data collected from subventricular zone neural stem cells (SVZ NSCs) cultured freshly in proliferation media, following a 24-hour incubation period with carbachol (an acetylcholine agonist) compared to a control group. The purpose of this experiment is to examine the cholinergic influence on the proliferation activity of neural stem cells located in the lateral ventricle.
DOI: 10.6084/m9.figshare.17148416.v2
title: SATc

description: Gridded hourly precipitation based on a linear average of three non-gauge-corrected satellite-based precipitation products (IMERG-Early, PERSIANN-CCS, and GSMaP_NRT) with a diurnal bias correction using automatic weather stations
DOI: 10.6084/m9.figshare.19929105.v1
title: Thermal thresholds for the germination of conidia of Exserohilum turcicum

description: ABSTRACT Corn (Zea mays L.) is cultivated throughout Brazil and presents great economic importance. Among the diseases that cause reduction in its productivity is helmintosporiosis. The objective of this study was to evaluate the conidial germination of the pathogen that causes helmintosporiosis, Exserohilum turcicum, in different temperatures and under different light regimes, to determine lower and upper temperature thresholds and optimum temperature for germination. The temperatures evaluated were 0, 5, 10, 15, 20, 25, 30, 35, and 40 °C, with exposure times of 3, 6, 9, and 12 h. After each exposure time, the number of germinated conidia and germinative tube length were determined. The experimental design was completely randomized with four replications and the data were subjected to analysis of variance and regression. For conidia of E. turcicum subjected to continuous light, it was found that most conidia germination occurred at the temperature of 23.3 °C for 3-h exposure; at 22.3 °C for 6 h; at 21.8 °C for 9 h; and at 21.7 °C for 12 h. For continuous darkness, the higher germination was observed in the temperature 24.0 °C for an exposure time of 3 h; at 22.5 °C for 6 h, at 21.8 °C for 9 h; in 21 7 °C for 12 h. Exserohilum turcicum spores germinated in a temperature range of 0 to 40 °C, the optimum temperature being 23 °C. The dark regime favored the germination of E. turcicum spores.
DOI: 10.6084/m9.figshare.22197421.v1
title: Derville et al. 2023 model data: whale abundance, fishing effort, and exposure by fishing zones

description: Dataset used in models for Derville et al. 2023 Biological Conservation, "Exposure of whales to entanglement risk in Dungeness crab fish-ing gear in Oregon, USA, reveals distinctive spatio-temporal and climatic patterns" <br> Abstract: Entanglement in fishing gear presents a major threat to marine mammals worldwide and a pressing concern for distinct populations of whales off the US West Coast. The lack of understanding of their fine-scale distribution in relation to fishing activity limits management efforts, specifically in Oregon. Based on year-round predictions of rorqual whale densities and fishing effort compiled from logbooks, we assess co-occurrence between commercial Dungeness crab fishing gear and whales over a decade (2011-2020) as an indicator of exposure to entanglement risk. Generalized Additive Models including temporal, climatic, and ocean upwelling predictors were used to investigate variations in exposure. Exposure peaked in April, at the onset of the upwelling season when whales were predicted to occur in greater numbers and closer to shore. Exposure remained constant until the end of the crab season in nearshore waters &lt;40 fathoms (73 m) and decreased past these depths. Across years, exposure was lower during the marine heatwave (2014-2016) when fishing was more active nearshore and whales were predicted to be less abundant. Exposure was higher before (2011-2013) and after (2017-2020) the heatwave, which correspond to negative phases of the Pacific Decadal Oscillation associated with stronger upwelling, indicating more productive conditions favorable to whales. A recent increase in exposure was also due to a slight shift in fishing effort towards deeper waters. These findings illustrate the use of fine-scale species distribution models to assess space-use conflicts in dynamic marine ecosystems and can be used to guide fisheries management to reduce entanglement risk in Oregon.
DOI: 10.6084/m9.figshare.5125222.v1
title: Supplementary Material for: The Positive Association of Obesity Variants with Adulthood Adiposity Strengthens over an 80-Year Period: A Gene-by-Birth Year Interaction

description: <b><i>Objective:</i></b> To test the hypothesis that the statistical effect of obesity-related genetic variants on adulthood adiposity traits depends on birth year. <b><i>Methods:</i></b> The study sample included 907 related, non-Hispanic White participants in the Fels Longitudinal Study, born between 1901 and 1986, and aged 25-64.99 years (474 females; 433 males) at the time of measurement. All had both genotype data from which a genetic risk score (GRS) composed of 32 well-replicated obesity-related common single nucleotide polymorphisms was created, and phenotype data [including body mass index (BMI), waist circumference, and the sum of four subcutaneous skinfolds]. Maximum likelihood-based variance components analysis was used to estimate trait heritabilities, main effects of GRS and birth year, GRS-by-birth year interaction, sex, and age. <b><i>Results:</i></b> Positive GRS-by-birth year interaction effects were found for BMI (p &lt; 0.001), waist circumference (p = 0.007), and skinfold thickness (p &lt; 0.007). For example, each one-allele increase in GRS was estimated to result in a 0.16 increase in BMI among males born in 1930 compared to a 0.47 increase among those born in 1970. <b><i>Conclusions: </i></b>These novel findings suggest the influence of common obesity susceptibility variants has increased during the obesity epidemic.
DOI: 10.6084/m9.figshare.25957501.v1
title: COMPUTER 16_24.xlsx

description: The examination of the familiarity of students with the basic concepts of computers relied on anonymous testing. A total of 1094 students participated in the evaluation, in the period from 2016/17 to 2023/24 academic year. The test contained 14 closed-ended questions focused on basic concepts of (personal) computers and their use, with 4 provided answers.
DOI: 10.17632/2jdzmh36h4
title: cache of spectrograms of fragments of MER recordings

description: Dataset contains cache of spectrograms of chunks of microelectrode recordings. Dataset is used by the software available at https://github.com/konradci/mer_classifier This dataset accompanies the paper K.A. Ciecierski, T. Mandat; Classification of DBS microelectrode recordings using a residual neural network with attention in the temporal domain; Neural Networks; 2023; ISSN 0893-6080; https://doi.org/10.1016/j.neunet.2023.11.021. Please cite the above reference if you wish to use this data.
DOI: 10.17632/36mjr8r5c3
title: The proteome of large or small extracellular vesicles in pig seminal plasma differs and defines sources and biological functions

description: Seminal plasma contains many and morphologically heterogeneous extracellular vesicles (sEVs) which, released by cells of the testis, epididymis and accessory sex glands, are involved in male and female reproductive processes. The goal of this study was to describe the proteome of porcine sEVs isolated by a size exclusion chromatography (SEC)-based procedure and size-classed as small (S-EVs) or large (L-EVs). The sEV-subsets were characterized for their total protein concentration, morphology, size distribution, EV-specific protein markers and purity. A total of 988 proteins were identified by LC-MS/MS and 737 of them were quantified by SWATH in S-EVs, L-EVs and EVs-free samples. The differential expression analysis revealed 197 differentially abundant proteins between both EV-subsets, and 37 and 199 between S-EVs and L-EVs vs EVs-free samples, respectively. The gene ontology (GO) enrichment analysis of differentially abundant proteins suggested, by the type of protein detected, that S-EVs would be released mainly through an apocrine blebbing pathway and be involved in modulating the immune environment of the female reproductive tract as well as during sperm-oocyte interaction. In contrast, the protein types detected might imply L-EVs are released by fusion of multivesicular bodies with the plasma membrane and would be involved in sperm physiological processes, such as capacitation and avoidance of oxidative stress.  In conclusion, this study provides a procedure capable of isolating of subsets of EVs from pig seminal plasma with a high degree of purity and shows differences in the proteomic profile between EV-subsets, suggesting different sources and biological functions.
DOI: 10.17632/8t8ztf6jrg
title: Data for: No effect of pyrolysis temperature and feedstock type on biochar hydraulic properties

description: Laboratory and field measurements of water retention characteristics and hydraulic conductivity of 12 standard biochars, as well as field saturated conductivity values of these same biochars incorporated into a sandy soil.
DOI: 10.23645/epacomptox.5588560.v2
title: Chemistry Dashboard Data: PubChem DTXSID Mapping File

description: The DSSTox to PubChem Identifiers mapping file is in TXT format and includes the PubChem SID, PubChem CID and DSSTox substance identifier (DTXSID).
DOI: 10.6084/m9.figshare.12932546.v1
title: Supporting Data 5: Processed raw sequencing data

description: Raw sequencing data
DOI: 10.6084/m9.figshare.19397948.v1
title: Single-cell sequencing of shrimp

description: single-cell sequencing in shrimp<br>
DOI: 10.6084/m9.figshare.22640047.v1
title: phenotype_soybean.csv

description: The phenotype dataset for soybean analyzed in this study.
DOI: 10.6084/m9.figshare.27645726.v1
title: measles data 11th NOV24.csv

description: spatial distribution of wanning immunity in children in selected district in Lusaka district
DOI: 10.6084/m9.figshare.28969778.v1
title: Sample metadata

description: Sample metadata
DOI: 10.6084/m9.figshare.12651053.v1
title: Supplementary Material for: Azathioprine for Connective Tissue Disease-Associated Interstitial Lung Disease

description: <b><i>Background:</i></b> Immunosuppressive therapy still is the standard treatment for patients with connective tissue disease-associated interstitial lung disease (CTD-ILD). <b><i>Objectives:</i></b> This retrospective study aimed to provide data on the tolerability and efficacy of azathioprine in progressive CTD-ILDs. <b><i>Methods:</i></b> A total of 56 patients with CTD-ILD treated with azathioprine between 2003 and 2014 were included in the study. The patients were assessed every 3 months during follow-up. <b><i>Results:</i></b> The mean treatment duration was 34 months, with a range of 3–105 months. Fifteen patients (27%) discontinued treatment due to side effects, mostly due to elevated liver enzymes, within the first 3 months. Forty-one patients were treated for longer than 3 months, and 27 of those (66%) had stabilization or improvement of pulmonary function during treatment. In patients who remained stable or improved, the mean FVC was 62 ± 17% predicted (% pred) at initiation of treatment and 65 ± 17% pred at the last follow-up visit (<i>p</i> = 0.036), and the mean DLCO was 38 ± 16% pred at initiation of treatment and 39 ± 17% pred at the last follow-up visit (<i>p</i> = 0.06). <b><i>Conclusions:</i></b> Azathioprine can stabilize or improve CTD-ILD. While early drug intolerance is frequent, most patients who have tolerated the drug well achieve long-term stabilization or improvement of lung function.
DOI: 10.6084/m9.figshare.28861634.v2
title: Research Farm Network DataBase

description: Based on the model of federally supported agricultural experimental stations, a number of universities have established shellfish aquaculture research farms through various means of support. Like terrestrial agriculture, these shellfish aquaculture research farms would benefit from increased coordination and communication. There is currently no compilation of research capacity or official means of communication. This project 1) <b>assessed the current</b><b> capacity and breadth of shellfish aquaculture research farms</b>, and 2) aims to establish a national network of those farms to improve collaboration and communication. This framework allows for expansion beyond the project's initial scope and suggests actionable steps going forward.<b>This database provides an overview of the current capacity of shellfish aquaculture research farms. </b>
DOI: 10.17632/srpx9w39cc
title: Data for: New DyHoCo medium entropy amorphous microwires of large magnetic entropy change

description: Raw data of DyHoCo
DOI: 10.17632/x58x95whbb
title: An exploratory study of financial behaviour using handwriting analysis for personality trait of Conscientiousness

description: The primary data was collected using a questionnaire tool developed in the English language. It was administered to 900 participants based on convenience sampling with 44% success rate, i.e 402 respondents filled the questionnaire and provided the needed information. 
The handwriting features used for analysis were extracted from the questionnaire using the sample text “The London Letter” originally designed by Osborn in 1929 (Harralson & Miller, 2018) as a predetermined text (Gavrilescu & Vizireanu, 2018) This paragraph has been used to collect handwriting samples in order to extract handwriting features for published studies. 
The behavioral statements were included to gather data that could be used for classification according to the Big Five Personality Traits Model. The questionnaire is based on the big five personality traits, and uses related facets along with correlated adjectives from John & Srivastava’s well cited work (John & Srivastava, 1999).
DOI: 10.6084/m9.figshare.12382505.v1
title: Experimental data.xlsx

description: Experimental data for the forecast of rupture
DOI: 10.17632/j3579v9xzg
title: Mitochondrial fumarate inhibits Parkin-mediated mitophagy

description: LC-MS raw spectra and processed quantification data are presented in Fig. 4D, FigS8A-S8B, and Fig. S2C–S2E.
DOI: 10.6084/m9.figshare.14658537.v2
title: DATASET Accidentes de trabajo Perú 2012-2020

description: DATASET Accidentes de trabajo Perú 2012-2020
DOI: 10.17632/t422w5wyxn
title: metabolic parameters and water quality parameters of the Yangtze River and Poyang Lake

description: This data is used in the paper "Spatial and temporal variation of metabolism in inland water transects under changing water regime conditions", including metabolic parameters and water quality parameters of the Yangtze River and Poyang Lake.
DOI: 10.6084/m9.figshare.12248567.v2
title: Quercus faginea chorology

description: Distribution map of Portuguese oak (<i>Quercus faginea</i>)<br>These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geo-databases, scientific and grey literature.The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix "plg"), which define continuous areas of occupancy of the species, and with point features (name suffix "pnt"), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix "syn").Polygon borders delimiting species ranges are generalized across the mainland and sea boundaries. This offers the possibility to mask sea areas or to clip and extract the terrestrial range parts using GIS data layers of the users' choice. An additional version of polygon ranges are clipped with a coastline (name suffix "clip"), which have been derived from Natural Earth dataset "Admin 0 - Countries" 1:50M version 4.1.0 (https://www.naturalearthdata.com)<br>Please cite as:<br>Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007<br><br>Additional information and used references are on 'supplementary materials' document:<br>https://doi.org/10.6084/m9.figshare.5091901<br><br>Chorological maps are part of the "European Atlas of Forest Tree Species" project:<br>https://w3id.org/mtv/FISE-Comm/v01<br>
DOI: 10.6084/m9.figshare.14676794.v1
title: Additional file 3 of GRiNCH: simultaneous smoothing and detection of topological units of genome organization from sparse chromatin contact count matrices with matrix factorization

description: Additional file 3 Supplementary_tables.xlsx. An Excel file containing Tables S1-3. Each spreadsheet tab includes table name and legend in the top rows.
DOI: 10.6084/m9.figshare.27297117.v1
title: Data of "Costs and benefits of temporal expectations on somatosensory perception and decision-making"

description: This repository contains the data reported in the research paper: "Costs and benefits of temporal expectations on somatosensory perception and decision-making".
DOI: 10.6084/m9.figshare.3793191.v1
title: Flavor characteristics of the juices from fresh market tomatoes differentiated from those from processing tomatoes by combined analysis of volatile profiles with sensory evaluation

description: Various commercial tomato juices with different flavors are available at markets worldwide. To clarify the marker compounds related to the flavor characteristics of tomato juice, we analyzed 15 pure commercial tomato juices by a combination of volatile profiling and sensory evaluation. The correlations among volatiles and the relationship between volatiles and sensory descriptors were elucidated by multivariate analyses. Consequently, the tomato juices made from fresh market tomatoes (including the popular Japanese tomato variety “Momotaro”) were clearly separated from other juices made from processing tomatoes, by both the volatile composition and sensory profiles. <i>cis</i>-3-Hexenol, hexanal, and apocarotenoids negatively contributed to the juices from fresh market tomatoes, whereas Strecker aldehydes and furfural showed positive contributions to the juices. Accordingly, the sensory characteristics of juices from fresh market tomatoes were related to cooked and fruity flavors but not to green or fresh notes. Combined analysis by instrumental and sensory evaluation of various commercial pure tomato juices elucidated the difference of their flavor characteristics.
DOI: 10.60893/figshare.apl.26084593.v1
title: MoSe2-SI-20240616

description: Details of the experiment and other supplemental data and figures
DOI: 10.17632/c98wk8g9s4
title: Plant invasions in the Middle Awash Valley, Ethiopia

description: Although natural ecosystems in Ethiopia are confronted with myriad of plant invasions, research to quantify plant invasion effects is restricted to limited areas of the country or a few species only. Data uploaded here were collected to examine the number and abundance of invasive and expanding plants (a native but spreading species) and their associated effects (individual as well as cumulative effects) on native species richness and diversity in a semi-arid rangeland in the Rift Valley Region, eastern Ethiopia. Data were gathered from forty-eight 20 X 20 m plots (established using systematic random fashion) and we recorded plant richness (both herbaceous and woody plants (comprising all trees and shrubs &gt;1 m height)) abundance-cover, and herbaceous species composition.
DOI: 10.17632/vm963zghnw
title: Data set__Antidandruf formulation from Aloe vera_ Ocimum sanctum_ and Withania Somnifera

description: This research data set contains data related to antidandruf shampoo using extracts from the leaves of Aloe Vera, Ocimum Sanctum, and Withania Somnifera herbs as an advancement of Ethiopian local herbs via formulation. The presented data gives information on the optimal formulation process for making the herbal antidandruff shampoo. Ethanol-extracted oil from Aloe Vera, Ocimum Sanctum, and Withania Somnifera leaves was used to create three different formulations: F1, F2, and F3. The formulated antidandruff shampoo was evaluated interms of its solid content, foamability, viscosity, dirt dispersion, pH, wetting time, and organoleptic properties. Additionally, the data set includes information on the antifungal activity performance of the Antidandruf shampoo against Malassezia furfur, as determined by disc diffusion and colony count tests. The active chemical components of the leaf-extracted oil were also measured using FTIR.
DOI: 10.6084/m9.figshare.14602479.v5
title: Carabid - fungal associations

description: Literature-based associations between ground beetles (Coleoptera: Carabidae) and Fungi. Data are provided as an importable MySQL database, as well as .csv tables, both as separate tables and as one merged dataset.
DOI: 10.6084/m9.figshare.21257256.v1
title: Kronagram (T1-T3).zip

description: Kronagram (T1-T3)
DOI: 10.6084/m9.figshare.27290361.v1
title: Haplotype resolved T2T genome assembly of pear cultivar Danxiahong

description: Pear (Pyrus L) is one of the most important fruit crops worldwide with great economic value and potential healthy benefit. ‘Danxiahong’ is an elite pear cultivar in north of China with red flushed fruit skin and excellent inner quality. PacBio HiFi long reads, Hi-C reads and second-generation sequencing data were applied for the assembly of the ‘Danxiahong’ genome, and two telomere-to-telomere gap-free and haplotype-resolved pear genomes were assembled, with the sizes of 495.37 Mb and 501.60 Mb, and contig N50 of 29.87 Mb and 29.32 Mb. About 62.50% and 62.76% repeat sequence were mapped to the 17 chromosomes for each haplotype. Gene annotations revealed 39,936 genes for hap1 and 39,707 genes for hap2 were identified, respectively. The haplotype-resolved genome of ‘Danxiahong’ significantly contributes to the investigation of genes and molecular mechanisms associated with fruit quality, as well as helpful for the Multi-Omics analysis, including comparative genomics, transcriptomics, proteomics and allelic expression research.