cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/s6vs79sjj8
title: Bird Communities Reveal the Ecological Value of Exotic Norway Spruce Plantations in Massachusetts, USA

description: Abstract from study: "The establishment of monoculture plantations of exotic tree species is a common practice for supplementing native timber stocks. Since native wildlife species may lack co-evolved traits needed to successfully exploit exotic tree species, exotic plantations are expected to provide inferior habitat for native biodiversity. However, some studies report that plantations may increase net biodiversity at the landscape scale by introducing novel habitats or supplementing existing natural forests. We used point counts to sample birds in 2016 and 2017 in mature Norway spruce (Picea abies) plantations in western Massachusetts, as well as representative native forest types, to evaluate bird use of these plantations relative to native forest types. Our findings showed that overall species richness for spruce plantations was similar to that of native forest habitats, and that several native conifer-dependent species (red-breasted nuthatch (Sitta canadensis), golden-crowned kinglet (Regulus satrapa), blackburnian warbler (Setophaga fusca), and brown creeper (Certhia americana) were significantly more abundant in spruce plantations relative to native deciduous, hemlock, and mixed stands. Bird species reported to associate with eastern hemlock (Tsuga canadensis), such as blue-headed vireo (Vireo solitarious) and black-throated green warbler (Setophaga virens), were observed using spruce plantations at similar levels as eastern hemlock stands. These results demonstrate that Norway spruce plantations can provide suitable habitat for native species associated with conifers, which is significant given projected continued decline of eastern hemlock in response to the hemlock wooly adelgid (Adelges tsugae). Although large-scale conversion of native forest to plantations would likely lead to a loss in biodiversity, land managers could be justified in allowing small-scale plantations to persist without suffering negative impacts to native biodiversity".

This data set represents observations (visual and aural) from avian point count surveys conducted over the course of two breeding seasons (May- June 2016 and 2017) at two sites in Massachusetts, U.S.A as well as associated vegetation surveys.
DOI: 10.17632/f55rsncm9y
title: Cross-tissue multiomics studies reveal gut-brain interactions mediating the effect of Akkermansia muciniphila in counteracting fructose-induced obesity

description: Metabolomics data to study anti-obesity effect of Akkermansia muciniphila.
Non-targeted global metabolomic profiling in plasma and feces at week 10 was performed at Metabolon, Inc. (Durham, NC, USA) (Bridgewater BR, 2014; Ford et al., 2020; Zierer et al., 2018). All samples were extracted in methanol and divided into 4 aliquots:  two for analysis by two separate reverse phase (RP)/UPLC-MS/MS methods with positive ion mode electrospray ionization (ESI), one for analysis by RP/UPLC-MS/MS with negative ion mode ESI, one for analysis by hydrophilic interaction chromatography (HILIC)/UPLC-MS/MS with negative ion mode ESI.
DOI: 10.17632/svvcwdjb9c
title: Data for: Quality improvement assessment of a pediatric orchiopexy care pathway

description: Raw data.
DOI: 10.17632/6gxj9hkdsz
title: RNA-controlled nucleocytoplasmic shuttling of mRNA decay factors regulates mRNA synthesis and initiates a novel mRNA decay pathway

description: CRAC experiment was performed as described previously (Bohnsack et.al. 2009, 2012 and, Granneman et.al. 2009). RNA-protein complexes were captured tandemly on IgG sepharose and Ni-NTA followed by partial RNase digestion using RNase-IT. After ligation of sequencing adaptors, cDNA libraries were prepared by reverse transcription and PCR amplification followed by Illumina deep sequencing. Data were analyzed as described before (Bohnsack et.al. 2009, 2012 and, Granneman et.al. 2009). 
Resultant sequencing files of full-length Xrn1 (FASTQ_CRAC_Xrn1) and Tail of Xrn1 (FASTQ_CRAC_Tail) each having two distinct biological repeats are uploaded here.
DOI: 10.17632/hrgvy7vgrh
title: Raw_Data_Materials_Characterization

description: Raw Data
DOI: 10.17632/94ppkj6yxz
title: Data for: 4D visualization of ground surface from an excavator by a solid-state 2D profilometer

description: Data (trench) include XYZ- coordinate (column 1-3) and intensity information (column 4)
DOI: 10.17632/sws9sh6m8s
title: IE data

description: This a primary data set collected by from farm households of The West Guji zone.
DOI: 10.17632/phzy3tmbzm
title: Villa & al 2020_IJP

description: Data from : "The transmission-blocking effects of antimalarial drugs revisited: fitness costs and sporontocidal effects of artesunate and sulfadoxine-pyrimethamine"; Villa M.; Buysse M.; Berthomieu A. and Rivero A. in INternational JOurnal for Parasitology 2020
DOI: 10.17632/4k2d2bd233
title: LDHU3_08.1490

description: phosphoribosylpyrophosphate synthetase
Leishmania donovani (HU3 strain)
DOI: 10.17632/jk7n39zbxs
title: Polls_US2020_election

description: Data related to the polls published during the US2020 electoral campaign from September 1st to election day. One file is for the characteristics of the polls (niv1), the other for the characteristics of the pollsters and the methods they use.
DOI: 10.17632/5sd3y2wdjh
title: Impact of Neuromuscular Electrical Stimulation and Swallowing Exercise in Improving Quality of Life and Dysphagia in Patients with Head and Neck Cancer : A Randomize Clinical Study

description: The study aim to compare the effect of NMES and swallowing exercise while managing the dysphagia and Quality of life in the patients with Head neck cancer. Total participant were divided into two group group A and group B with 14 participants each.
DOI: 10.17632/583hyjmy5v
title: Dataset 4U.4: Solutions files, sigma = 500, part 4 (Nam et al., Robustness and parameter geography in post-translational modification systems)

description: All proper solutions files for Paramotopy runs with \sigma = 500 on ILR-sampled parameter points in [0.1, 10]^8.
DOI: 10.17632/r8yhp7fk6r
title: FLIM aplicado no estudo dos processos dinâmicos de sistemas fotoluminescentes

description: Arquivos .das obtidos durante os experimentos single-point time-resolved e mapping realizados na tese.
DOI: 10.17632/b2mscbnhmg
title: Datasets for Homebrew: an economical and sensitive glassmilk-based nucleic-acid extraction method for SARS-CoV-2 diagnostics

description: These datasets are those corresponding to our manuscript entitled 'Homebrew: an economical and sensitive glassmilk-based nucleic-acid extraction method for SARS-CoV-2 diagnostics'
DOI: 10.17632/r79ngfdb56
title: High-throughput sequencing of Precise CRISPR/Cas9-targeted Recessive Dystrophic Epidermolysis Bullosa immortalised keratinocytes (Ion Torrent)

description: In this study, the COL7A1 on-target (exon 73) was analysed for precise CRISPR/Cas9 activity. NGS data was assessed in CRISPR/Cas9-treated immortalised patient keratinocytes Despite high on-target activity, high homgeneity of DSB repair outcomes was observed at the nuclease target site. This should result in efficient reframing of the gene, with minimal divergence from the wild-type sequence.
DOI: 10.17632/4h57j6r2d4
title: Plio-Pleistocene fluvial dynamics in the pro-foreland basins of Taiwan Orogeny: thermochronological constraints and tectonic implications from the syn-orogenic deposits

description: In order to tackle the fast exhumation of the Taiwan Orogeny to the adjacent sedimentary basins, we report new results of zircon fission track (ZFT), calcareous nannofossil biostratigraphy, and diagnostic magnetic mineral tracer on syn-orogenic sediments of present-day river sands and Plio-Pleistocene sedimentary samples from pro-foreland basins of western Taiwan. ZFT age spectrum of the modern Dadu River corresponds well to exposed bed rock with reset zircon ages of 3-4 Myr and partially-reset zircon ages of 10-40 Myr. Age spectrum of the modern Choshui River, however, indicates a fast exhumed source with young peak age of 1.7 Myr which has not been widely explored and reported. The Pleistocene successions in the Dadu and the Choshui catchments both show younging upwards signals which mirrored the exhumation of sourced terranes. Nevertheless, variations of ZFT age population in conjunction with petrography and magnetic mineral tracer indicated very complex developments of sediment routing systems within each catchment for the past 1 Myr. Knowledge towards then-current sediment routing systems has great influences on our interpretations for the exhumation history. The maximum exhumation rates were estimated as 3.2 mm/yr for the Choshui River and 2.0 mm/yr for the Dadu River. In general, exhumation rates increased since 1 Myr with variations and the reorganization of the Choshui Rivers reflected the exhumation history of different tectonic provinces. The difference of exhumation rates across the Dadu and Choshui catchments suggests along-strike variation of exhumation in central Taiwan. In addition, the discrepancies between the Tamshui and Dadu catchments through time suggests the waning of exhumation in northern Taiwan, possibly resulting from the flipping of subduction polarity in a regional scale.
DOI: 10.17632/bpxctngk9h
title: Dataset of core LV53-19-1 from the Japan Sea

description: A database containing age model, planktic foraminifera δ18O and lipids of the core sediment LV53-19-1 from the Japan Sea. Data associated with the paper: Yonghua Wu, Xuefa Shi, Xun Gong, Zhimin Jian, Jianjun Zou, Yanguang Liu, Gerrit Lohmann, Sergey A. Gorbarenko, Ralf Tiedemann, and Lester Lembke-Jene. (2020). Evolution of the upper ocean stratification in the Japan Sea since the last glacial. Geophysical Research Letters. Under Review
DOI: 10.17632/xfw3nsvxwr
title: Reproducible MD simulation for slip-CTB interaction

description: This is the reproducible LAMMPS code and data for slip-CTB interaction.
DOI: 10.5281/zenodo.14848781
title: NeuroPRIS

description: NeuroPRIS is a Python package designed for RNA sequence prediction, leveraging deep learning architectures for predictive modeling in bioinformatics.
DOI: 10.5281/zenodo.14848782
title: NeuroPRIS

description: NeuroPRIS is a Python package designed for RNA sequence prediction, leveraging deep learning architectures for predictive modeling in bioinformatics.
DOI: 10.17632/9mtm9h5wg8
title: Genetic dissection of novel myopathy models reveals the role of CapZα and Leiomodin 3 during myofibril elongation

description: Excel files include the raw data used within the respective figure.
DOI: 10.17632/zj825t4r39
title: Accuracy and confidence among new first-year dermatology residents in the diagnosis of common dermatologic conditions in different Fitzpatrick skin types

description: Online survey, full study methodology
DOI: 10.17632/m2wj5gzm6v
title: RNAseq data for the article "From static to dynamic: The influence of mechanotransduction on skin equivalents analyzed by bioimaging and RNAseq"

description: Bulk RNA sequencing dataset and code for artificial skin models grown with and with out mechanical stimuli.
DOI: 10.17632/mhj2zjhm3r
title: Raw data-Resveratrol treatment reduces the vulnerability of SH-SY5Y cells and cortical neurons overexpressing SOD1-G93A to Thimerosal toxicity through SIRT1/DREAM/PDYN pathway

description: Research data
DOI: 10.17632/2vc4jtr3rg
title: Data for: One goal, different pathways: Apprehension of student diversity in achievement processes among first year at the university

description: Database used for the paper on multigroup analysis
DOI: 10.17632/bkygbwj995
title: Data for: Non-local, non-convex functionals converging to Sobolev norms

description: We study the pointwise convergence and the $\Gamma$-convergence of a family of non-local, non-convex functionals $\Lambda_\delta$ in $L^p(\Omega)$ for $p&gt;1$. We show that the limits are multiples of $\int_{\Omega} |\nabla u|^p$. This is a continuation of our previous work where the case $p=1$ was considered.
DOI: 10.17632/mz3k45rg7v
title: Dataset 5W: Certification files, sigma = 2000 (Nam et al., Robustness and parameter geography in post-translational modification systems)

description: All composite output files from certifying solutions from Paramotopy runs with \sigma = 2000.
DOI: 10.17632/p838ryxnn8
title: Synaesthesia for reading written musical keys

description: SPSS data files relating to the six experiments
DOI: 10.17632/5k3f8mw22y
title: Pten-NOLC1 Fusion Promotes C-MET and EGFR Signaling in Human Cancers (RNAseq Sample KB170T section 2-1)

description: Prostate transcriptome data
DOI: 10.17632/ww34gx8tjc
title: Data for: Reactive origin of mantle harzburgite: evidence from orthopyroxene-spinel association

description: These data are the compositions of orthopyroxenes and spinels of mantle xenoliths from the continental margin, in the Thrace Basin, NW Turkey. The data in Supplementary Table S1 is the major elements of orthopyroxenes and spinels and the data in S2 is the trace elements of orthopyroxenes.
DOI: 10.17632/dp6cyxsdpy
title: Consumo intensivo de alcohol en universitarios compostelanos durante el confinamiento. 

description: To determine the prevalence of Heavy Episodic Drinking (HED)  among university students from Santiago de Compostela during lockdown as well as the influence of the different variables on this pattern of consumption during lockdown by the coronavirus pandemic.
DOI: 10.17632/jkjhjv36gn
title: Proinflammatory Signaling in Islet β Cells Propagates Invasion of Pathogenic Immune Cells in Autoimmune Diabetes

description: Data file in Prism that includes all raw data in manuscript
DOI: 10.17632/4pgmpzw7ck
title: Cutaneous Immune-related Adverse Events are Associated with Longer Overall Survival Among Advanced Cancer Patients Treated with Immune Checkpoint Inhibitors

description: Supplemental files
DOI: 10.17632/tkdn5h67rj
title: Data for: Dynorphin and Enkephalin Opioid Peptides and Transcripts in Spinal Cord During Peripheral Inflammatory Hyperalgesia and Allodynia

description: Comprehensive transcriptomic profile of human, dog and rat dorsal root ganglion tissue. Comprehensive transcriptomic profile of human and rat dorsal spinal cord tissue.
DOI: 10.6084/m9.figshare.28379558
title: <b>Rethinking high carbon emissions associated with thick sediments in reservoirs</b>

description: Dams trap sediments and create carbon emission hotspots within reservoirs, fueling ongoing debates about their contributions to atmospheric greenhouse gas levels. This study introduced the concept of carbon emissions per unit mass or volume of sediment as carbon emission intensity (CEI), examined its correlation with sediment thickness using 58 global data sets, and clarified the impact of sediment thickness on CEI through incubation experiments. Here, we share the global data that support the findings of this study.
DOI: 10.17632/8z9pg3nxyp
title: Marketing in the Times of the Coronavirus Dataset

description: The aim of this research is to examine the impact of COVID-19 on the marketing industry in Serbia.
DOI: 10.6084/m9.figshare.28379558.v1
title: <b>Rethinking high carbon emissions associated with thick sediments in reservoirs</b>

description: Dams trap sediments and create carbon emission hotspots within reservoirs, fueling ongoing debates about their contributions to atmospheric greenhouse gas levels. This study introduced the concept of carbon emissions per unit mass or volume of sediment as carbon emission intensity (CEI), examined its correlation with sediment thickness using 58 global data sets, and clarified the impact of sediment thickness on CEI through incubation experiments. Here, we share the global data that support the findings of this study.
DOI: 10.17632/cc3xybf9dj
title: calculation based on experimental results

description: calculation based on experimental results
DOI: 10.17632/dy8335jsn9
title: Braille reading in early and late blind subjects during critical developmental period: An fMRI study
DOI: 10.17632/j5j3gh4ps4
title: Cryptocurrency User Attitudes Towards the Environmental Impact of Proof-of-Work in Nigeria: Online Survey Results

description: The "Cryptocurrency User Attitudes Towards the Environmental Impact of Proof-of-Work in Nigeria" online survey is a convenience sample survey of residents of Nigeria aged 16 and over that have participated in Bitcoin transactions in the past. Between November 2021 and March 2022, participants were asked their opinions on cryptocurrencies, the environmental effects of using them, and attitudes towards these effects.

Data Collector: Stojeka Consulting Nig, Ltd.

Universe: Persons 16 and over that reside in Nigeria and have participated in at least one Bitcoin transaction within five years prior to responding to the survey.

Units of Analysis: Individual

Method of Data Collection: Online Survey
DOI: 10.17632/kkdjdtsxpk
title: Formation of artifact-hydride in Zr-containing amorphous alloys during sample preparation and atom probe tomography

description: Hydride formation in Zr-containing amorphous alloys as an experimental artifact was investigated utilizing atom probe tomography, transmission electron microscopy, and focused ion beam with normal and cryogenic conditions. The amount of hydrogen existing in the atom probe specimens decreased significantly by utilizing focused ion beam milling under cryogenic condition. Also, the formation of hydride was confirmed by diffraction pattern analysis in the remaining tip of the specimen after the atom probe tomography experiment. With those collected pieces of evidence, sources of hydrogen in the atom probe tomography were discussed.
DOI: 10.17632/rp6ysk3tvt
title: Data for: Mica-liquid trace elements partitioning and the granite-pegmatite connection: The St-Sylvestre complex (Western French Massif Central)

description: Major and trace element compositions of micas from the granite of the St Sylvestre Leucogranite complex, (Limousin, Fance) and from the pegmatite of the Mont d'Ambazac pegmatite field that are intrusive in the St Sylvestre leucogranite complex.
DOI: 10.17632/xj2rgjmtd8
title: The condensation energy of the homogeneous superconducting gas

description: Abstract We present CHS, a computer program designed to calculate the condensation energy of the homogeneous superconducting electron gas. The correlation energy, which we treat at the level of the RPA, is an essential ingredient for the construction of a local density approximation in the framework of density functional theory for superconductors (SCDFT) [Kurth et al., Phys. Rev. Lett. 83 (1999) 2628]. Title of program: CHS Catalogue Id: ADQT_v1_0 Nature of problem Calculation of the superconducting condensation energy of the homogeneous superconducting gas, the key ingredient of the local density approximation for superconductors [1]. Versions of this program held in the CPC repository in Mendeley Data ADQT_v1_0; CHS; 10.1016/S0010-4655(02)00614-8 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/9g8vv2pdvs
title: Pt/Co/Ir multilayers with PMA on Silicon

description: Kerr Microscope images for stack number n = 1,2,3,4,6
DOI: 10.17632/dr5bth77fp
title: Exploring the Structural relationship Between Sexual Dysfunctional Beliefs, Marital Satisfaction, and Sexual Well-Being in Iranian Women: The Role of Cognitive Schemas

description: This study aimed to investigate the relationship between sexually dysfunctional beliefs, sexual well-being, and marital satisfaction among Iranian married women. The study also explored the potential mediating role of sexual cognitive schemas. The participants were 355 Iranian married women aged 18 to 65 years who completed a battery of self-report measures to collect data. Structural equation modeling (SEM) was used to test the hypotheses, and mediation analyses were conducted to examine the indirect effects of sexual dysfunctional beliefs and sexual cognitive schemas on marital satisfaction through sexual well-being. The findings indicated that sexual dysfunctional beliefs had a negative impact on sexual well-being and marital satisfaction among Iranian married women. Sexual cognitive schemas played a mediating role in this relationship, highlighting the importance of addressing negative and unrealistic sexual beliefs and promoting positive and healthy sexual cognitive schemas for improving sexual and relational outcomes. The study sheds light on the cultural and societal factors influencing sexual attitudes and behaviors among Iranian women, highlighting the need to address these factors in interventions aimed at improving sexual and relational outcomes.
DOI: 10.17632/wk2nf354kr
title: Prevalent and immunodominant CD8 T-cell epitopes are conserved in SARS-CoV-2 variants. Meyer et al

description: Supplementary materials accompanying the article "Prevalent and immunodominant CD8 T-cell epitopes are conserved in SARS-CoV-2 variants" by Meyer et al.
DOI: 10.17632/x8jff9t6cm
title: LINF_260029600

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/s5gbpgrdcd
title: Dataset for a manuscript "Elevation, soil elemental stoichiometry and landscape structure determine the nitrogen and phosphorus loadings of agricultural catchments in the subtropics"

description: This dataset contains long-term (2011-2016) field observations of social information, soil properties, landscape indices, stream flow and water quality for the nine studied agricultural catchments (FULING, FEIYUE, XINGSHA, JIUXIYUAN, GUANJIA, JIANSHAN, TUOJIA, NANYUE and WANGZIYUAN) in Jinjing Town of Hunan Province in the subtropics of Central China. The areas of the studied catchments range from 9 to 7,336 ha.
DOI: 10.17632/kcg77gsk2b
title: Regulatory small RNAs as antimicrobial drug targets

description: Figures depict the genetic features of sRNAs, investigating where they are located, how they are regulated, and their roles in major pathogenic bacteria.
DOI: 10.17632/6fxg5dc5s8
title: TIERRAS: A package to simulate high energy cosmic ray showers underground, underwater and under-ice

description: Abstract In this paper we present TIERRAS, a Monte Carlo simulation program based on the well-known AIRES air shower simulations system that enables the propagation of particle cascades underground, providing a tool to study particles arriving underground from a primary cosmic ray on the atmosphere or to initiate cascades directly underground and propagate them, exiting into the atmosphere if necessary. We show several cross-checks of its results against CORSIKA, FLUKA, GEANT and ZHS simulations and w... Title of program: TIERRAS for AIRES Catalogue Id: AEFO_v1_0 Nature of problem Simulation of high and ultra high energy underground particle showers. Versions of this program held in the CPC repository in Mendeley Data AEFO_v1_0; TIERRAS for AIRES; 10.1016/j.cpc.2009.09.022 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)