cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25257223.v1
title: <b>Lipids in the root tips were largely altered by loss-function of three RLKs in </b><b><i>Arabidopsis thaliana</i></b>

description: Root tips can sense moisture gradients and grow into environments with higher water potential. This process is called root hydrotropism. Here, we report three closely related receptor-like kinases (RLKs) that play critical roles in root hydrotropism: <i>A</i><i>LTERED</i><i> R</i><i>OOT </i><i>H</i><i>YDROTROPIC RESPONSE 1 </i>(<i>ARH1</i>), <i>FEI1</i>, and <i>FEI2</i>. Overexpression of these <i>RLKs</i> strongly reduced root hydrotropism, but corresponding loss-of-function mutants exhibited an increased hydrotropic response in their roots. All these RLKs showed polar localization at the plasma membrane regions in the root tips. The biosynthesis of the cell wall, cutin, and wax (CCW) was significantly impaired in the root tips of <i>arh1-2 fei1-C fei2-C</i>. A series of known CCW mutants also exhibited increased root hydrotropism and reduced osmotic tolerance, similar to the characteristics of the triple mutant. Our results demonstrated that the integrity of the cell wall, cutin, and previously unreported root cap wax mediate the trade-off between root hydrotropism and osmotic tolerance.
DOI: 10.5517/ccdc.csd.cc2gkp7z
title: CCDC 2281111: Experimental Crystal Structure Determination

description: Related Article: Neda Jeddi, Neil W. J. Scott, Theo Tanner, Simon K. Beaumont, Ian J. S. Fairlamb|2024|Chemical Science|15|2763|doi:10.1039/D3SC06447F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/fdv9m38c2f.1
title: The Effect of Female Leadership on Contracting from Capitol Hill to Main Street

description: Code and data to replicate results in: "The Effect of Female Leadership on Contracting from Capitol Hill to Main Street" by Jonathan Brogaard, Nataliya Gerasimova, and Maximilian Rohrer, forthcoming in the Journal of Financial Economics. Please see the README file for details on files and code provided.
DOI: 10.5281/zenodo.10692597
title: Acoustic target strength data from ex situ measurements of yellowfin tuna

description: This dataset contains target strength values obtained from ex situ measurements of swimbladdered juveniles of yellowfin tuna. Data were collected in an offshore cage located in the Achotines Laboratory (Panama) at four operative frequencies: 38 kHz, 70 kHz, 120 kHz and 200 kHz.
DOI: 10.5281/zenodo.10692598
title: Acoustic target strength data from ex situ measurements of yellowfin tuna

description: This dataset contains target strength values obtained from ex situ measurements of swimbladdered juveniles of yellowfin tuna. Data were collected in an offshore cage located in the Achotines Laboratory (Panama) at four operative frequencies: 38 kHz, 70 kHz, 120 kHz and 200 kHz.
DOI: 10.6084/m9.figshare.25265932
title: Supplementary Table 1

description: List of bacterial genome information used to create the predictor.
DOI: 10.6084/m9.figshare.25265932.v1
title: Supplementary Table 1

description: List of bacterial genome information used to create the predictor.
DOI: 10.6084/m9.figshare.25265953
title: Supplementary table 2

description: Bacterial genome used from Freilich dataset: list of bacterial genome information used to test the predictor.
DOI: 10.6084/m9.figshare.25265953.v1
title: Supplementary table 2

description: Bacterial genome used from Freilich dataset: list of bacterial genome information used to test the predictor.
DOI: 10.6084/m9.figshare.25265959
title: Supplementary table 3

description: Interaction information within the primary network cluster.
DOI: 10.60893/figshare.jap.25103729
title: ACE potential files

description: The ACE potential files developed for atomistic simulations.
DOI: 10.60893/figshare.jap.25097498.v1
title: Experimental Characterization of a Mode-Localized Acceleration Sensor Integrating Electrostatically Coupled Resonators

description: The classical electrostatically driven double-ended solidly supported MEMS resonator
DOI: 10.57745/398wct
title: TableS3_Fouchecourt2023.tab

description: :unav
DOI: 10.57745/nvl5lr
title: TableS4_Fouchecourt2023.xlsx

description: :unav
DOI: 10.57745/zcsd5y
title: TableS2_Fouchecourt2023.tab

description: :unav
DOI: 10.57745/m8fm49
title: TableS7_Fouchecourt.tab

description: :unav
DOI: 10.57745/pj91bc
title: TableS1_Fouchecourt2023.xlsx

description: :unav
DOI: 10.57745/geglvh
title: TableS5_Fouchecourt2024.xlsx

description: :unav
DOI: 10.57745/phrrur
title: TableS6_Fouchecourt2024.xlsx

description: :unav
DOI: 10.57745/xjqsc8
title: all_suppl_FigS1_S9_Fouchecourt2024.pdf

description: :unav
DOI: 10.5281/zenodo.10693083
title: Dataset of occupant density, indoor environmental conditions and thermal comfort survey in open plan offices during the COVID-19 pandemic

description: The objective measurements were carried out during weekdays between September 27th, 2021 and October 22th, 2021 during the COVID-19 pandemic. Thermal conditions were monitored between 8:30AM until 17:30PM with an interval of 5 minutes. The HVAC systems were not operating during the case study period and the building was conditioned via natural ventilation according to the recommendations of the UCTEA Chamber of Mechanical Engineers (UCTEA Chamber of Mechanical Engineers, 2020). The objective measurements included indoor air temperature, relative humidity, globe temperature and air velocity, which were measured by probes connected to off-the-shelf anemometers. Thermal comfort variables were measured at a height of 0.60 m in accordance with the requirements of the ASHRAE 55-2013 and ISO 7730 Standards for an occupant at sitting position. Equation (1) presents the formulation of the operative temperature in ASHRAE55 Standard. Here, A is weighting factor determined based on the air velocity. In this study, A was determined as 0.5 according to the ASHRAE55 Standard since all air velocity measures were lower than 0.2 m/s.Moreover, Ta represents        indoor air temperature, To represents operative temperature, Tr     represents mean radiant temperature.

To = A × Ta + (1 − A) × Tr                                                                                      Eq. (1)

A questionnaire was designed to obtain information related to occupants’ responses to their thermal environment. Within this context, occupants were asked to express their thermal sensations according to the ASHRAE thermal sensation scale. In addition, the questionnaire included questions regarding occupants’ thermal preference and satisfaction by using a three- and a two-point scale, respectively. The occupants provided their responses at the end of the day, reflecting their overall experience during the day. A total of 1400 responses were collected and all of them were included in the analysis.

UCTEA Chamber of Mechanical Engineers. (2020, July 6). Recommendations for offices during  pandemic. Https://Www.Mmo.Org.Tr/.
DOI: 10.5281/zenodo.10693084
title: Dataset of occupant density, indoor environmental conditions and thermal comfort survey in open plan offices during the COVID-19 pandemic

description: The objective measurements were carried out during weekdays between September 27th, 2021 and October 22th, 2021 during the COVID-19 pandemic. Thermal conditions were monitored between 8:30AM until 17:30PM with an interval of 5 minutes. The HVAC systems were not operating during the case study period and the building was conditioned via natural ventilation according to the recommendations of the UCTEA Chamber of Mechanical Engineers (UCTEA Chamber of Mechanical Engineers, 2020). The objective measurements included indoor air temperature, relative humidity, globe temperature and air velocity, which were measured by probes connected to off-the-shelf anemometers. Thermal comfort variables were measured at a height of 0.60 m in accordance with the requirements of the ASHRAE 55-2013 and ISO 7730 Standards for an occupant at sitting position. Equation (1) presents the formulation of the operative temperature in ASHRAE55 Standard. Here, A is weighting factor determined based on the air velocity. In this study, A was determined as 0.5 according to the ASHRAE55 Standard since all air velocity measures were lower than 0.2 m/s.Moreover, Ta represents        indoor air temperature, To represents operative temperature, Tr     represents mean radiant temperature.

To = A × Ta + (1 − A) × Tr                                                                                      Eq. (1)

A questionnaire was designed to obtain information related to occupants’ responses to their thermal environment. Within this context, occupants were asked to express their thermal sensations according to the ASHRAE thermal sensation scale. In addition, the questionnaire included questions regarding occupants’ thermal preference and satisfaction by using a three- and a two-point scale, respectively. The occupants provided their responses at the end of the day, reflecting their overall experience during the day. A total of 1400 responses were collected and all of them were included in the analysis.

UCTEA Chamber of Mechanical Engineers. (2020, July 6). Recommendations for offices during  pandemic. Https://Www.Mmo.Org.Tr/.
DOI: 10.5281/zenodo.10688086
title: Spatial predictions of retrogressive thaw slump susceptibility in the Northern Hemisphere permafrost region

description: Here, we provide a raster file of the RTS susceptibility map in the Northern Hemisphere. The map is a result of a scientific study by Makopoulou et al. (2024, in review). File is provided in TIFF-format.
DOI: 10.5281/zenodo.10688087
title: Spatial predictions of retrogressive thaw slump susceptibility in the Northern Hemisphere permafrost region

description: Here, we provide a raster file of the RTS susceptibility map in the Northern Hemisphere. The map is a result of a scientific study by Makopoulou et al. (2024, in review). File is provided in TIFF-format.
DOI: 10.5281/zenodo.10689618
title: Data for paper "Topic Shifts as a Proxy for Assessing Politicization in Social Media"

description: Data for the paper Topic Shifts as a Proxy for Assessing Politicization in Social Media. For the code, see https://github.com/marceloslo/Topic-Shifts-as-a-Proxy-for-Assessing-Politicization-in-Social-Media.
DOI: 10.5281/zenodo.10689619
title: Data for paper "Topic Shifts as a Proxy for Assessing Politicization in Social Media"

description: Data for the paper Topic Shifts as a Proxy for Assessing Politicization in Social Media. For the code, see https://github.com/marceloslo/Topic-Shifts-as-a-Proxy-for-Assessing-Politicization-in-Social-Media.
DOI: 10.25345/c5wh2dr67
title: MassIVE MSV000094151 - GNPS Aspergillus novoparasiticus NIPE-UNIFESP Diadema positive
title: Analysis of secondary metabolites during incubations of 7 to 28 days using Aspergillus novoparasiticus (strain Y174) in sugarcane juice, through LC-DAD-HRMS/MS2 in the positive mode.
DOI: 10.3886/e192306v1
title: GEOWEALTH

description: Wealth inequality has been sharply rising in the United States and across many other high-income countries. Due to a lack of data, we know little about how this trend has unfolded across locations within countries. Investigating this subnational geography of wealth is crucial, as from one generation to the next, wealth powerfully shapes opportunity and disadvantage across individuals and communities. Using machine-learning-based imputation to link newly assembled national historical surveys conducted by the U.S. Federal Reserve to population survey microdata, the data presented in this paper addresses this gap. The Geographic Wealth Inequality Database ("GEOWEALTH") provides the first estimates of the level and distribution of wealth at various geographical scales within the United States from 1960 to 2020. The GEOWEALTH database enables new lines investigation into the contribution of inter-regional wealth patterns to major societal challenges including wealth concentration, spatial income inequality, equality of opportunity, housing unaffordability, and political polarization.<br>
DOI: 10.3886/e192306v2
title: GEOWEALTH-US: Spatial wealth inequality data for the United States, 1960-2020

description: Wealth inequality has been sharply rising in the United States and across many other high-income countries. Due to a lack of data, we know little about how this trend has unfolded across locations within countries. Investigating this subnational geography of wealth is crucial, as from one generation to the next, wealth powerfully shapes opportunity and disadvantage across individuals and communities. Using machine-learning-based imputation to link newly assembled national historical surveys conducted by the U.S. Federal Reserve to population survey microdata, the data presented in this paper addresses this gap. The Geographic Wealth Inequality Database ("GEOWEALTH-US") provides the first estimates of the level and distribution of wealth at various geographical scales within the United States from 1960 to 2020. The GEOWEALTH-US database enables new lines investigation into the contribution of inter-regional wealth patterns to major societal challenges including wealth concentration, spatial income inequality, equality of opportunity, housing unaffordability, and political polarization.<br>
DOI: 10.3886/e192306v3
title: GEOWEALTH-US: Spatial wealth inequality data for the United States, 1960-2020

description: Wealth inequality has been sharply rising in the United States and across many other high-income countries. Due to a lack of data, we know little about how this trend has unfolded across locations within countries. Investigating this subnational geography of wealth is crucial, as from one generation to the next, wealth powerfully shapes opportunity and disadvantage across individuals and communities. Using machine-learning-based imputation to link newly assembled national historical surveys conducted by the U.S. Federal Reserve to population survey microdata, the data presented in this paper addresses this gap. The Geographic Wealth Inequality Database ("GEOWEALTH-US") provides the first estimates of the level and distribution of wealth at various geographical scales within the United States from 1960 to 2020. The GEOWEALTH-US database enables new lines investigation into the contribution of inter-regional wealth patterns to major societal challenges including wealth concentration, spatial income inequality, equality of opportunity, housing unaffordability, and political polarization.<br>
DOI: 10.3886/e192306v4
title: GEOWEALTH-US: Spatial wealth inequality data for the United States, 1960-2020

description: Wealth inequality has been sharply rising in the United States and across many other high-income countries. Due to a lack of data, we know little about how this trend has unfolded across locations within countries. Investigating this subnational geography of wealth is crucial, as from one generation to the next, wealth powerfully shapes opportunity and disadvantage across individuals and communities. Using machine-learning-based imputation to link newly assembled national historical surveys conducted by the U.S. Federal Reserve to population survey microdata, the data presented in this paper addresses this gap. The Geographic Wealth Inequality Database ("GEOWEALTH-US") provides the first estimates of the level and distribution of wealth at various geographical scales within the United States from 1960 to 2020. The GEOWEALTH-US database enables new lines investigation into the contribution of inter-regional wealth patterns to major societal challenges including wealth concentration, spatial income inequality, equality of opportunity, housing unaffordability, and political polarization.<br>
DOI: 10.48338/vu01-0ocunq
title: Mating rate influences female reproductive investment in a simultaneous hermaphrodite, Lymnaea stagnalis

description: The dataset contains the data used to analyse the result of the study "Mating rate influences female reproductive investment in a simultaneous hermaphrodite, Lymnaea stagnalis" by Hoffer, Schwegler, Ellers and Koene, published in 2012 in Animal Behaviour 84: 523-529.
DOI: 10.48338/vu01-q7lfel
title: Barmentlo 2024 Feral Swine Selective Sweep

description: The dataset here is described in Barmentlo et al., 2023 (doi: XXX). In short, this dataset includes Geneseek Porcine SNP Array (60k) genotypes of 881 feral swine from the United States. The animals represent hybrid descendants of European Wild boar X Western heritage breed pigs (Smyser et al., 2020). The dataset includes data from 5 different populations: from the Great Smoky Mountain National Park (n=537), North Carolina (n=108), South Carolina (n=125), West Virginia (n=64) and Tennessee (n=47). Additionally, a subset of 53 Great Smoky Mountain National Park animals was strategically selected to represent the genetic range observed within GRSM for genotyping with the high-resolution Axiom Porcine Genotyping Array (600k). No filtering was performed on these samples, but the Smoky Mountain and the Outlying populations datasets were formatted to be compatible. Note that each dataset contains 3 files: a bim, a bed and a fam file. These represent variant information, binary genetic information per individual and family information, respectively.
DOI: 10.48338/vu01-irec95
title: Data from 'Dominant gingers – discovery and inheritance of a new shell polymorphism in the great pond snail Lymnaea stagnalis'

description: These datasets contains the data and R codes from the article entitled 'Dominant gingers – discovery and inheritance of a new shell polymorphism in the great pond snail Lymnaea stagnalis'. In this study, we tested if newly discovered shell colour polymorphism, called Ginger, is inherited by a single locus Mendelian mode. In addition, we examined if the life history of Ginger snails are different from wild types. Specifically, we measured and compared several life history traits between two morphs (G=Ginger, WT=Wild Type), including body size, onset of egg laying, fecundity, and mating behaviour. Moreover, we scored the phenotypes of self-fertilised and outcrossed offspring, in order to determine the inheritance mode of Ginger phenotype. The R codes are for making graphs and testing hypotheses. Please find more details in README.txt in the directory.
DOI: 10.48338/vu01-izjoof
title: Data from 'Sublethal heat reduces overall reproductive investment and male allocation in a hermaphroditic snail species' 

description: It has been well established that exposure to sub-lethal temperature affects reproductive performances in diverse organisms. Although this effect has been particularly emphasised in males or male functions, it remains to firmly demonstrated that the effect of heat on fertility is sex-specific. To contribute to the testing of this hypothesis, here we examined the impacts of sub-lethally high temperature on male and female functions in a simultaneously hermaphroditic snail species, Lymnaea stagnalis. We exposed snails to temperatures at 20, 24 and 28 ˚C for 14 days and quantified their growth, egg and sperm productions, sperm transfer, mating behaviour and sex allocation.
DOI: 10.48338/vu01-yo96tu
title: Data from 'Dynamics of seminal fluid production after mating'

description: We examined the expression pattern of SFP genes after mating in the great pond snail, Lymnaea stagnalis. We let the snails mate under observation, and sampled their prostate gland 3, 24, 48 and 192 h after mating to extract total RNA and measure the gene expression using reverse-transcription qPCR (RT-qPCR). We examined six SFP genes previously described, LyAcp5-10 (Koene et al. 2010, Swart et al. 2019). Contrary to our expectation, we did not observe the increased transcription immediately after mating, but a few showed high expression level one week after mating.
DOI: 10.48338/vu01-qgrc9v
title: Mating motivation: the effect of eliminating the male function on sexual behaviour in a simultaneous hermaphrodite

description: The dataset contains the data used to analyse the result of the study "Mating motivation: the effect of eliminating the male function on sexual behaviour in a simultaneous hermaphrodite" by Palmeira, Nakadera and Koene, accepted for publication in Animal Behaviour in 2023.
DOI: 10.48338/vu01-9emxz1
title: AeroCarb output archive

description: This archive is the central location for distributing information about the ESA AeroCarb scientific support study for the Copernicus CO2-M monitoring system (CO2-M). In subdirectories you find the deliverable reports, underlying data as well as computer codes that were used for data processing.
DOI: 10.48338/vu01-2lt5v4
title: Naturally Fermented Milk from Northern Senegal

description: Characterization of the bacterial community composition of a naturally fermented milk product (lait caillé), prepared in wooden bowls (lahals) in northern Senegal, which is produced with a bacterial biofilm to steer the fermentation process. A probiotic starter culture containing the most documented probiotic strain Lactobacillus rhamnosus GG (generic strain name yoba 2012) was included into the local fermentation process.
DOI: 10.48338/vu01-i9eppm
title: Metabolomics and Lipidomics of Muscle and Blood after bed rest 

description: Raw data of the metabolomics and lipidomics analysis of muscle and blood taken after various days of bed rest, as part of the AGBRESA study (DLR 2019).
DOI: 10.48338/vu01-kpabvo
title: Metabolomics of Muscle and Blood in Long COVID

description: Raw metabolomics data of muscle and blood samples taken before and after the induction of post-exertional malaise in patients with Long COVID
DOI: 10.48338/vu01-ffcdli
title: Responsible Supervision: Pseudonymised transcripts focus groups

description: This folder contains the pseudonymised transcripts of the focus groups with PhD candidates and supervisors conducted as part of the Responsible Supervision project.