cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/3kgvtkmzw3
title: FXR and GPBAR1 signaling and statin  reverses vascular and liver damage in non-alcoholic fatty liver disease 

description: Non-alcoholic steatosis (NAFLD) and steatohepatitis (NASH) are highly prevalent human disorders closely correlated with obesity, metabolic syndrome and at risk for developing atherosclerotic cardiovascular disease (CVD). It is widely established that the CV component dictates the patient outcomes more frequently and to a greater extent than does the progression of the liver component and it is the most common cause of death for NAFLD patients. So, it is recommended that statins should be added to therapy in patients at increased risk for developing CV complications. Atorvastatin is a hydrophobic statin indicated for the treatment of hypercholesterolemia, combined hyperlipidemia and NAFLD. Furthermore, the co-activation of FXR and GPBAR1, two members of bile acid-activated receptors family, by the dual ligands BAR502, represent new therapeutic option for the pharmacological treatment of hepatic and metabolic disorders.The aim of the study was to compare the effects of BAR502 and atorvastatin in two rodent model of atherosclerosis and NAFLD to evaluate the efficacy of their combination. Aorta trascriptome and microbiota of  Apolipoprotein E deficient mice (ApoE−/−) and liver trascriptome of C57BL6 mice fed with HFD-F alone or with BAR502, or Atorvastatin, or their combination were analyzed.
DOI: 10.6084/m9.figshare.12367085.v1
title: Whole-genome sequencing of semi-supercentenarians

description: Aggregated data for 81 semi-supercentenarians (105 and 110 years old) and for 36 controls were reported. The detailed description of the cohort is reported in Materials and Methods of the paper Garagnani et al 2021 ("Whole-genome sequencing analysis of semi-supercetenarians"). Allele frequency is reported for 5,511,852 variants (MAF&gt;0.05) and after the quality filters reported in the paper.Each position is reported with the indication of chromosome (CHR) and genomic position in GRCh37 (POS).
DOI: 10.6084/m9.figshare.13167608.v1
title: Supporting Material - Nitrate removal uncertainty in stormwater control measures: Is the design or climate a culprit?

description: Supporting material data for the data embedded into the manuscript "Nitrate removal uncertainty in stormwater control measures: Is the design or climate a culprit?"<br>
DOI: 10.6084/m9.figshare.27184341.v1
title: Supplemental File 4: <i>P. eatonii</i> gene annotation

description: Gene annotation in GFF3 format of the genome assembly of a <i>Penstemon eatonii</i> specimen collected in American Fork Canyon in Utah in 2023.
DOI: 10.17632/8rymxsx46j
title: GammarusPulex_DEB_GUTS_T_simulations

description: Raw data files of the simulations executed for and described in the research article "How relevant are temperature corrections of toxicity parameters in population models for environmental risk assessment of chemicals?". The underlying population model (written in the software Smalltalk, Squeak 5.3) and R scripts for the data analysis are available on the GitHub repository: https://github.com/NikaGoldring/GammarusPulex_DEB-GUTS-T.git 
Methods and data analysis can be found in the underlying research article (DOI will follow upon publication).
DOI: 10.17632/mwz9xv4cpd
title: Pig skin anatomy and physiology 

description: Database containing information on 14 parameters related to porcine skin anatomy and physiology skin surface pH, number of stratum corneum layers, stratum corneum thickness, corneocyte thickness, corneocyte dimensions (length and width), volume fraction of water in corneocyte (where S.C. is divided into 4 parts with different water content), intercellular lipid thickness, viable epidermis thickness, dermis thickness, hair follicle and hair shaft diameter, hair follicle depth, hair follicle density.
DOI: 10.17632/zb6mmp3zm3
title: Loss Of Hepatic Small Heterodimer Partner Elevates Ileal Bile Acids And Alters Cell Cycle Related Genes In Male Mice.

description: Supplemental Data and Figures for:
Title: Loss Of Hepatic Small Heterodimer Partner Elevates Ileal Bile Acids And Alters Cell Cycle Related Genes In Male Mice.
Ryan Philip Henry Shaw1*, Peter Kolyvas1*, Nathanlown Dang1, Angela Hyon1, Keith Bailey2 and Sayeepriyadarshini Anakk1, 3,,4,5#

1Department of Molecular and Integrative Physiology, 2Veterinary Diagnostic Laboratory 3Beckman Institute for Advanced Science and Technology, 4Division of Nutritional Sciences, 5Cancer Center at Illinois, University of Illinois at Urbana-Champaign, Urbana, IL.
* These authors contributed equally to this work.
# Corresponding: anakk@illinois.edu (SA.)
DOI: 10.17632/nn4353y2xx
title: G banded metaphase images

description: Access to datasets is vital to research, design and development of machine learning models and algorithms. Machine learning approaches for automated karyotyping system always require metaphase image dataset. The human metaphase images are not easily available for the researches in the field of cytogenetics. With the present contribution, microscopic images of G banded human metaphases are provided and made publicly available to research community. The dataset is prepared from the peripheral blood samples collected from volunteers. Through a series of cytogenetic procedures namely, culturing, harvesting, slide preparation, banding and staining , G banded metaphase images are captured using Leica DM 2500 microscope and Leica DMC 2900 camera. These image data can be used by the researchers basically for automated karyotyping system design and research. Researchers in various image processing and machine learning applications fields such as preprocessing, segmentation, metaphase classification can make use of these images. There are 100 sample images with resolution 2048 * 1536 and bit depth 24 are provided. All images are in .png format.
DOI: 10.17632/szvphh4hfb
title: Metabolites from Ten Medicinal Trees Species Indigenous to Bowen University, Nigeria

description: This dataset comprises Fourier Transform Infrared Spectroscopy (FTIR) analyses of the leaves and stems of ten medicinal tree species gathered from Bowen University Campus and mini forest: a part of the tropical rainforest in Osun State, Nigeria. The research identified the chemical components and functional groups of the species. For a comprehensive description of each data item including the list of tree species, FTIR analytes, and interpretation, please consult the accompanying document titled 'Ten Tree Species FTIR Data.'
DOI: 10.6084/m9.figshare.19298582.v1
title: Bauhinia variegata genome

description: Bauhina variegata的注释文件，包括基因的结构和功能注释。以及orthofinder2找到的11个物种的orthogroups。
DOI: 10.17632/4mkcsz6fst
title: Exact Slater integrals

description: Title of program: SLATER INTEGRALS Catalogue Id: ACYB_v1_0 Nature of problem In atomic structure calculations, one has to evaluate the Slater integrals. In the present program, we evaluate exactly the Slater integral when hydrogenic wave functions are used for the bound-state orbitals. Versions of this program held in the CPC repository in Mendeley Data ACYB_v1_0; SLATER INTEGRALS; 10.1016/0010-4655(78)90018-8 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/rp8nthpx4f
title: Experiment files and measurement parameters for Bruker Invenio-R

description: In the experiment file (.xpm), the settings and values of the advanced parameters (e.g. resolution, sample scan time, background scan time, spectral range to be used.) are stored. Meanwhile, the phase resolution is stored in the FT. The optic parameters are shown in this experimental condition as well.
DOI: 10.6084/m9.figshare.11274968.v1
title: Datasets from Steinmetz et al. 2019 in NWB format

description: NWB-formatted dataset from Steinmetz et al. Nature 2019.<br>See the Nature paper and github repository for further details about the dataset, links below. <br>Thanks to Renee Wang for converting this dataset into NWB format, and to funding from the Kavli Foundation for supporting this effort.
DOI: 10.6084/m9.figshare.5164864.v1
title: Data for Baltrus-Arnold Luteibacter-Sulfur Submission

description: Data underlying figures for Baltrus and Arnold 2017 "Unusual sulfur requirements during laboratory growth of Luteibacter". Relevant data for Figs 1,2, and 4 are provided in .csv form.
DOI: 10.6084/m9.figshare.22736543.v1
title: Vertebrate chemoreceptor alignments

description: One sequence alignment file (fasta) for each chemoreceptor family. Alignments were obtained following the procedure indicated in the manuscript : - First, a template alignment was produced using known chemoreceptor sequences from previous studies and outgroup sequence - Then, all complete chemoreceptor sequences were added to these alignments with mafft --add and the --keeplength option
DOI: 10.6084/m9.figshare.25951681.v1
title: Raw Data Files

description: These are raw data files that are taken in by the replication codes. Please note that in the replication code files, these data sets are all from the "raw_data" file location, which would need to be set by any replicators manually.
DOI: 10.6084/m9.figshare.28545548.v1
title: <b>PRTF-Nislab</b>

description: The dataset includes 75 pairs of original <b>pinna models</b>, covering a diverse range of anatomical variations. And it contains simulated <b>Pinna-Related Transfer Function (PRTF)</b> data obtained using COMSOL Multiphysics with the <b>Boundary Element Method (BEM)</b>. The data is provided in CSV format and is divided into two parts: PRTF-M&F and PRTF-P&N. The dataset is intended for use in spatial audio research, auditory perception studies, and acoustic simulations.
DOI: 10.4121/uuid:916c86cd-3558-4672-829a-105c62985ab2
title: The Egg Model - data files

description: The "Egg Model" is a synthetic reservoir model consisting of an ensemble of 101 relatively small three-dimensional realizations of a channelized reservoir produced under water flooding conditions with eight water injectors and four producers. This data set represents a "standard version" of the Egg Model which is meant to serve as a standard test case in future publications. We implemented and tested the model in four reservoir simulators: Dynamo/Mores (Shell), Eclipse (Schlumberger), AD-GPRS (Stanford University) and MRST (Sintef). This data set also contains the input files for the various simulators.
DOI: 10.6084/m9.figshare.28943690.v4
title: <b>10-meter (2019–2023)</b>

description: This study employs multi-temporal Sentinel-2 imagery
DOI: 10.17632/567vphjjcz
title: Dramaturgi Pilpres 2024

description: Berikut adalah data penelitian untuk penelitian observasi pemilihan presiden di Indonesia tahun 2024.
DOI: 10.17632/75pgynzhv2
title: HEPMath 1.4: A mathematica package for semi-automatic computations in high energy physics

description: Abstract This article introduces the Mathematica package HEPMath which provides a number of utilities and algorithms for High Energy Physics computations in Mathematica. Its functionality is similar to packages like FormCalc or FeynCalc, but it takes a more complete and extensible approach to implementing common High Energy Physics notations in the Mathematica language, in particular those related to tensors and index contractions. It also provides a more flexible method for the generation of numerica... Title of program: HEPMath Catalogue Id: AEWU_v1_0 Nature of problem Automatisation of (Feynman diagrammatic) computations in High Energy Physics, representation and manipulation of tensors with symbolic indices in the Mathematica language, generation of numerical code and interface to Python. Versions of this program held in the CPC repository in Mendeley Data AEWU_v1_0; HEPMath; 10.1016/j.cpc.2015.04.022 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/z6ys4b763s
title: Wastewater treatment plant contaminant profiles affect macroinvertebrate sludge degradation: data

description: These files contain the data used in the manuscript: Wastewater treatment plant contaminant profiles affect macroinvertebrate sludge degradation. We assessed the sludge degradation potential of (combinations of) multiple macroinvertebrate taxa on sludge with different contaminant profiles. We hypothesized that, in sludges with a higher contaminant load, sludge degradation would decrease less in treatments with multiple macroinvertebrate taxa, compared to treatments with only single taxa. We did do two experiments: one with sludges from three different WWTPs, of which we characterized the contaminant profiles; and one in which we experimentally spiked a sludge with Cu. Macroinvertebrates were able to increase sludge degradation in most treatments, but was taxa and WWTP plant specific. In the sludge with the hihgest contaminant load, higher than expected sludge degradation in multiple taxa treatments was observed. The same was observed in the Cu-spike experiment, in which sludge degradetion was higher than expected at intermediate Cu concentrations. The data consists of four excel files: one for the experiment with multiple WWTP sludges, one for the characterization of the sludge contaminant profiles, one for the Cu-spike experiment, and one for the callibration lines of the macroinvertebrate length-DW relation.
DOI: 10.6084/m9.figshare.14591664.v4
title: HelminthTraits

description: Dataset, metadata and R code to accompany <i>Predictors of zoonotic potential in helminths</i> by Ania A. Majewska, Tao Huang, Barbara Han, John M. Drake <br>HelminthTraits.csv is dataset on parasitic helminths that infect wild mammals along with traits for each helminth species.
DOI: 10.6084/m9.figshare.20348712.v1
title: Single-Cell transcriptomic data of 5716 FAP- CD29+ CAP (CAF-S4) from human breast cancer

description: Required citation: 
<br>
Seurat R object of 5716 CAP (CAF-S4) cells from 3 breast cancer patients
<br>
<strong>Comprehensive landscape of stromal heterogeneity and plasticity in breast cancer</strong>
<br>
read Seurat object:
---------------------------
CAP &lt;-readRDS("CAP_3patients_integrated_Final_Annotation.rds")
# Annotation
CAP@meta.data
# Plot umap
DimPlot(CAP, group.by = "final.annotation")
<br>
DOI: 10.6084/m9.figshare.22331503.v1
title: <sup>Prediction of Cloud API performance using Uncertainty-based Fusion of Predictive and Analytical Modeling - Dataset</sup>

description: The dataset that was used for the evaluations in the paper 'Prediction of Cloud API performance using Uncertainty-based Fusion of Predictive and Analytical Modeling'.DOI: 10.1109/HPCC-DSS-SmartCity-DependSys60770.2023.00076
DOI: 10.6084/m9.figshare.3491663.v1
title: Image inventory.xlsx

description: Inventory of image file names
DOI: 10.17632/98jjsbybzy
title: Supplemental Materials. A cross-sectional analysis of quality-of-life in skin of color patients with cutaneous t-cell lymphoma: an exploratory study 

description: Supplemental Materials. A cross-sectional analysis of quality-of-life in skin of color patients with cutaneous t-cell lymphoma: an exploratory study
DOI: 10.17632/m4wxpzhdz5
title: Application of the quantum Fourier transform in a harmonic balance solver for Burgers' equation

description: This dataset contains part of the numerical codes and data used for Dewitte, L., Roland, J., Eulitz, F. 'Application of the quantum Fourier transform in a harmonic balance solver for Burgers’ equation'. Computers & Fluids, vol. 295, June 2025, 106619. https://doi.org/10.1016/j.compfluid.2025.106619.

More specifically, this dataset contains the codes used to generate the data for the paper (i.e., the numerical solver and the VKI QCFD Framework which implements the QFT algorithms), as well as the statistics derived from the numerical study of the QFT algorithms. It does not contain the codes used for data post-processing, nor the raw data from the algorithm study or the solver study. The raw data are available from the corresponding author, Frank Eulitz (frank.eulitz@vki.ac.be), upon reasonable request.
DOI: 10.6084/m9.figshare.26972467.v2
title: Open inventories of rainfall-triggered landslides, new landslide events

description: New inventories of rainfall event-based landslide data digitized automatically or manually by NASA scientists for either disaster response or for the Cooperative Open Online Landslide Repository (COOLR). The new inventories correspond to 22 different rainfall events from the years 2019-2023.
DOI: 10.6084/m9.figshare.28711064.v1
title: Aerosol Particle Trapped

description: Particle trapped by optical tweezers, captured using lateral imaging
DOI: 10.6084/m9.figshare.28788707.v2
title: Narratives of Distrust: Climate Change, Disinformation, and the Dynamics of Right-Wing Media

description: This study examines climate change narratives within the Midnight Rider Telegram channel, an alternative media platform characterized by minimal content moderation and high susceptibility to disinformation. Using inductive thematic analysis, we identify four interrelated narrative themes: Faultfinding, Disinformation, Elitism, and Appeal to Emotion. This channel was selected for analysis due to data availability around the COP period, the number of subscribers, and its association with right-wing followers. Our research focuses on how these narratives were constructed in this media Telegram channel between November 2, 2023, and January 10, 2024, around the time of COP28. We filtered messages using specific keywords relevant to climate change. For our analysis, we decided to focus exclusively on channel messages and short videos (shorter than 10 minutes) and to exclude images, due to the low number of images and their minimal text content. We transcribed the videos using the AI-driven video editor Descript (https://www.descript.com/) and merged the transcribed video content and the text messages into one document in chronological order. Thematic analysis was conducted using MAXQDA, a qualitative data analysis software, to identify patterns and themes in the collected data. The process involved familiarizing ourselves with the data, generating initial codes, searching for themes, reviewing and refining these themes, and producing a report on the findings. We ultimately identified nine codes, which were then grouped into four overarching themes.
DOI: 10.15468/dl.sx7ajv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sagamichthys schnakenbecki (Krefft, 1953)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((33.4566 -25.7816,35.1352 -25.1504,26.9648 -25.1504,26.9648 -34.0826,27.209 -34.0314,28.1962 -33.4486,30.3395 -31.6744,31.7308 -29.6968,32.7846 -28.846,33.3559 -27.1274,33.4566 -25.7816))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013184-250525065834625/datasets/export for details.
DOI: 10.17632/y4nhk8jx6x
title: Data for: A comparative study of methods for determining carbonate content in marine and terrestrial sediments

description: This file contains lithology descriptions of experimental sediment samples, comprehensive comparison of carbonate determination methods and images for auxiliary analysis.
DOI: 10.6084/m9.figshare.14123648.v1
title: Supplementary Material for: Preventive Interventions for Young Adults in Nightlife: Coproduction for a Systematic Literature Assessment Followed by a Stakeholder Dialogue Process

description: <b><i>Introduction:</i></b> The nightlife-associated illicit drug and alcohol use presents diverse problems and includes different areas. In the Canton of Zurich, Switzerland, young adults in the nightlife setting were recently set as a priority group for preventive interventions. <b><i>Method:</i></b> Based on the predefined protocol, we systematically collated evidence on preventive interventions regarding young adults’ use of alcohol and illicit drugs in nightlife. EBSCO Medline, Embase, PsycInfo, and PsyIndex were searched for reviews (1990–2016) and primary studies (2012–2016). Additional sources and experts were consulted, and stakeholders involved throughout the research process. Interventions were summarized according to the before-, at- and after-the-party stages. <b><i>Results:</i></b> Before the party, good-quality studies were found for social media interventions, indicating positive effects on alcohol consumption. For the at-the-party stage, good evidence of low to medium quality was presented for crisis interventions and medical care at festivals and for multi-sector approaches. The after-the-party setting was mainly covered by gray literature, and evidence remained limited for designated drivers and street safety interventions in the target group. The stakeholder dialogue was a structured exchange and favored the following evidence-informed preventive intervention fields: personalized feedback via social media, sustaining awareness among nightlife managers, focus on public nighttime transportation, and multi-sector approaches. <b><i>Conclusion:</i></b> The systematic involvement of stakeholders was an inspiring means for identifying evidence relevant for practice and policy in nightlife and fostering implementation. Especially, individual-based interventions, such as personalized feedback via social media and guided reflection on alcohol or drug use, and broader networking, were considered promising.
DOI: 10.6084/m9.figshare.23994768.v1
title: Data and analysis to accompany the article "<b>Quantifying changes in dexterity as a result of piano training in people with Parkinson's disease</b>"

description: This is data and matlab code to accompany the article:"<b>Quantifying changes in dexterity as a result of piano training in people with Parkinson's disease</b>" by Tamir-Ostrover et al., 2024It contains the raw data (anonymous), as well as the Matlab code to perform the analyses presented in the paper, including generating the graphsThe file README.txt in the main directory explains how to run the analysis software<br>
DOI: 10.6084/m9.figshare.24935769.v1
title: Data for “OMI-derived Mass- and Number-Conserved Estimation of Black Carbon Emissions”

description: Two sets of BC emission datasets estimated for "OMI-derived Mass- and Number-Conserved Estimation of Black Carbon Emissions"