cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.jh39gh
title: Occurrence Download

description: A dataset containing 47373201 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Norway",
 "HasGeospatialIssue is FALSE",
 "HasCoordinate is TRUE",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 47373201 records from 1265 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016678-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ydsy6p
title: Occurrence Download

description: A dataset containing 5315371 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 5315371 records from 186 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043595-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vf2ekb
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stangeia xerodes (Meyrick, 1886)"
 ]
}

 The dataset includes 33 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008023-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sfsfwm
title: Occurrence Download

description: A dataset containing 495 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Knema latericia Elmer"
 ]
}

 The dataset includes 495 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035597-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.narpxj
title: Occurrence Download

description: A dataset containing 2074 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((30 70.54838, 30.53865 70.54838, 30.53865 70.73809, 30 70.73809, 30 70.54838))"
 ]
}

 The dataset includes 2074 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042228-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mhj87n
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Knema lamellaria W.J.de Wilde"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035592-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h0jtcl
title: Occurrence Download

description: A dataset containing 127074 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Quercus petraea (Matt.) Liebl.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 127074 records from 386 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008023-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hpu2yu
title: Occurrence Download

description: A dataset containing 440 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((55.309 74.47094, 60 74.47094, 60 75.77847, 55.309 75.77847, 55.309 74.47094))"
 ]
}

 The dataset includes 440 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042225-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gcmr83
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lamium galactophyllum Boiss. & Reut."
 ]
}

 The dataset includes 42 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035619-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u6y57n
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation)",
 "OccurrenceStatus is Present",
 "TaxonKey is Rafflesia lagascae Blanco"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180093-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n6xfbm
title: Occurrence Download

description: A dataset containing 1166 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lithocarpus polystachyus (Wall. ex A.DC.) Rehder"
 ]
}

 The dataset includes 1166 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070071-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2qdtjv
title: Occurrence Download

description: A dataset containing 4025 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Iris xiphium L."
 ]
}

 The dataset includes 4025 records from 147 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035593-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uwlgxr
title: Occurrence Download

description: A dataset containing 194 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is South Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "ScientificName is Bradypodion transvaalense (Fitzsimons, 1930)"
 ]
}

 The dataset includes 194 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008024-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nj7cha
title: Occurrence Download

description: A dataset containing 5574 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ostrea edulis Linnaeus, 1758",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Year is greater than or equal to 2000",
 "Geometry POLYGON((-15 72, -15 28, 50 28, 50 72, -15 72))",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 5574 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016820-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g49tbr
title: Occurrence Download

description: A dataset containing 713 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Knema laurina (Blume) Warb."
 ]
}

 The dataset includes 713 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035606-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e33ryq
title: Occurrence Download

description: A dataset containing 170992 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Heteromyidae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 170992 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008024-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ktb5xn
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Adonis shikokuensis Nishikawa & Koji Ito"
 ]
}

 The dataset includes 66 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016826-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uakeh4
title: Occurrence Download

description: A dataset containing 118 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Isachne arfakensis Ohwi"
 ]
}

 The dataset includes 118 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035646-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6hy2d8
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tetraglochin ameghinoi (Speg.) Speg."
 ]
}

 The dataset includes 26 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008024-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6jzxb3
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Astarte longirostra d'Orbigny, 1842",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 85 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042226-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3gy2zs
title: Occurrence Download

description: A dataset containing 123614 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Adoxa moschatellina L."
 ]
}

 The dataset includes 123614 records from 818 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016838-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngwq29
title: Occurrence Download

description: A dataset containing 2992 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence, Observation, Specimen)",
 "Country is Tanzania, United Republic of",
 "GadmGid is TZA",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 2017-2018"
 ]
}

 The dataset includes 2992 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010875-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mct7hk
title: Occurrence Download

description: A dataset containing 1523 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Atriplex polycarpa (Torr.) S.Watson)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is United States of America",
 "StateProvince is California"
 ]
}

 The dataset includes 1523 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010876-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/55ydfryz4r.1
title: Base_caracterización_vf

description: Base del estudio observacional de corte trasversal con los afiliados mayores de 18 años a la EAPB desde el 2018 hasta el 2021, cuyo nicho es el Área Metropolitana de Bucaramanga cuyo objetivo fue analizar los resultados históricos de la caracterización de los afiliados mayores de 18 años al ingreso a una EAPB en el Área Metropolitana de Bucaramanga en relación con la demanda de servicios de hospitalización y atención en el primer nivel de atención desde el 2018 hasta el año 2021 para identificar el riesgo de hospitalización de los afiliados por causa general y por patología psiquiátrica.
DOI: 10.17632/b77fvrry52.1
title: algorithm

description: This algorithm includes the MATLAB file used for the calculations in the paper titled "Technical and Economic Assessments in Customized Cost Analysis for Second-Life Batteries."
DOI: 10.15468/dl.dexv8d
title: Occurrence Download

description: A dataset containing 318 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is Xeno-canto - Bird sounds from around the world",
 "TaxonKey is Bubo virginianus (J.F.Gmelin, 1788)",
 "Year 1992-2025"
 ]
}

 The dataset includes 318 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010877-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7arbv4
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Pachira morae Fern.Alonso"
 ]
}

 The dataset includes 16 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010878-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/bwzb6n3xbc.1
title: SVCFit benchmark dataset

description: This page contains all the data required to reproduce the figures included in the publication.
The source code for SVCFit and the figures is freely available at https://github.com/KarchinLab/SVCFit.
=====================================================================================
In the Figure_1 folder:
- input: BED files used for data simulation.
 - HACk.random.bed is for single-clone simulation.
 - c1.bed, c2.bed, and c3.bed are for multiple-clone simulation.
 - allele2.bed is an empty file required by VISOR [1] for simulating heterozygous variants.
- multiple_vcfs: VCF files from multiple-clone simulation.
- single_vcfs: VCF files from single-clone simulation.
- svc_m_rdata: SVclone output from multiple-clone simulation, saved in .RData format.
- svc_s_rdata: SVclone output from single-clone simulation, saved in .RData format.
- svcfit_time.txt: A text file storing runtime results from SVCFit.
- svclone_time.txt: A text file storing runtime results from SVclone.

*Figures 1A and 1B: input, single_vcfs, multiple_vcfs, svc_s_rdata, svc_m_rdata
*Figure 1C: The data used to create the mixtures is available upon request from the European Genome-phenome Archive (EGAD00001001343).
 The script used to create the mixtures is available at https://github.com/mcmero/SVclone_Rmarkdown/blob/master/make_insilico_mixtures.sh [2].
*Figure 1D: svcfit_time.txt, svclone_time.txt


In the Figure_S folder:
- HACk.random.bed: Contains structural variants included in the simulation for read depth analysis.
- depth: A folder containing read depth data for each simulation.

*Figure S2: HACk.random.bed, depth


Reference
1. Bolognini, Davide, Sanders, Ashley, Korbel, Jan O, Magi, Alberto, Benes, Vladimir, and Rausch, Tobias, ‘VISOR: A Versatile Haplotype-Aware Struc-tural Variant Simulator for Short- and Long-Read Sequencing’, Bioinfor-matics, 36/4 (2020), 1267–69
2. Cmero, Marek, Yuan, Ke, Ong, Cheng Soon, Schröder, Jan, Corcoran, Niall M., Papenfuss, Tony, et al., "Inferring Structural Variant Cancer Cell Fraction," Nature Communications, 11(1) (2020), 730.
DOI: 10.15468/dl.rcex6r
title: Occurrence Download

description: A dataset containing 1838 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is International Barcode of Life project (iBOL)",
 "TaxonKey is one of (Lactarius Pers., 1797, Lactifluus (Pers.) Roussel)"
 ]
}

 The dataset includes 1838 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010879-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v3sprk
title: Occurrence Download

description: A dataset containing 503898 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-433.66767 4.12078,-433.66097 3.9957,-433.58056 3.92199,-433.41081 3.81031,-433.18298 3.77681,-432.85464 3.82595,-432.65585 3.84158,-432.35878 3.87955,-432.03937 4.03814,-431.99693 4.18556,-432.0349 4.33521,-432.09298 4.40668,-432.22923 4.40222,-432.2873 4.36201,-432.35207 4.295,-432.42802 4.31511,-432.51513 4.29277,-432.5665 4.30394,-432.67148 4.29947,-432.73179 4.2749,-432.87251 4.2481,-433.01546 4.2481,-433.15171 4.21236,-433.47558 4.18109,-433.5895 4.21236,-433.66767 4.16099,-433.66767 4.12078))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 503898 records from 402 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010852-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14798633
title: Seasonality of radium isotopes in an intertidal aquifer

description: This dataset contains the groundwater numerical model file (FEFLOW_model.zip) and field data (Data.xlsx). Any questions on the data should contact yiliuyl@hkust-gz.edu.cn
DOI: 10.5281/zenodo.14798634
title: Seasonality of radium isotopes in an intertidal aquifer

description: This dataset contains the groundwater numerical model file (FEFLOW_model.zip) and field data (Data.xlsx). Any questions on the data should contact yiliuyl@hkust-gz.edu.cn
DOI: 10.15468/dl.cuzu4p
title: Occurrence Download

description: A dataset containing 2992 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence, Observation, Specimen)",
 "Country is Tanzania, United Republic of",
 "GadmGid is TZA",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 2017-2018"
 ]
}

 The dataset includes 2992 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010880-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dqy8py
title: Occurrence Download

description: A dataset containing 2113 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Fauna y flora asociada al Plan de Ordenación y Manejo Ambiental de la cuenca del río Cravo Norte, jurisdicción del departamento de Arauca"
 ]
}

 The dataset includes 2113 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010881-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dvgugf
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is A Neotype for Didelphis marsupialis Linnaeus, 1758"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010882-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cwqg7v
title: Occurrence Download

description: A dataset containing 1523 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Atriplex polycarpa (Torr.) S.Watson)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is United States of America",
 "StateProvince is California"
 ]
}

 The dataset includes 1523 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010884-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bgyjgh
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Pachira morae Fern.Alonso"
 ]
}

 The dataset includes 16 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010886-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6wec9c
title: Occurrence Download

description: A dataset containing 1523 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Atriplex polycarpa (Torr.) S.Watson)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is United States of America",
 "StateProvince is California"
 ]
}

 The dataset includes 1523 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010887-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j4r8y6
title: Occurrence Download

description: A dataset containing 590602 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is eButterfly Surveys"
 ]
}

 The dataset includes 590602 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010853-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6ur628
title: Occurrence Download

description: A dataset containing 442 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Peritoma arborea (Nutt. ex Torr. & A.Gray) Iltis)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is United States of America",
 "StateProvince is California"
 ]
}

 The dataset includes 442 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010888-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.