cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4725491
title: Africa COVID-19 Community Vulnerability Index (CCVI)

description: Surgo Ventures' Africa CCVI ranks 756 regions across 48 African countries on their vulnerability—or their ability to mitigate, treat, and delay transmission of the coronavirus. Vulnerability is assessed based on many factors grouped into seven themes: socioeconomic status, population density, access to transportation and housing; epidemiological factors; health system factors; fragility; and age. The index reflects risk factors for COVID-19, both in terms of clinical outcomes and socioeconomic impact. The Africa CCVI is the only index to measure vulnerability to COVID-19 within most countries in Africa at this level of detail. The index is modular to reflect the reality that vulnerability is a multi-dimensional construct, and two regions could be vulnerable for very different reasons. This allows stakeholders to customize pandemic responses informed by vulnerability on each dimension. For example, policymakers can identify areas for scaling up COVID-19 testing that are more vulnerable on theme two - population density - or direct community health workers or mobile health units to areas that are vulnerable due to weak health systems infrastructure. The modularity of the Africa CCVI can help governments design lean and precise responses for subnational regions during each phase of the pandemic. <strong>Data files:</strong> <em><strong>Africa_CCVI_subnational_zenodo.csv</strong></em>: Africa CCVI and seven themes' scores for 756 administrative level-1 regions across 48 countries <em><strong>Africa_CCVI_country_zenodo.csv</strong></em>: Africa CCVI and seven themes scores across 36 countries (12 countries excluded as country-specific data sources were used for them) <strong><em>DHS_raw_indicators_Zenodo.csv</em></strong>: this CSV contains indicator data for 36 countries, data was primarily sourced from Demographic and Health Surveys (DHS) in addition to other sources (listed in accvi-data-sources.xlsx) <strong><em>non_DHS_raw_indicators_Zenodo.csv</em></strong>: 12 countries that did not have a recent DHS, so we used country-specific surveys, MICS UNICEF, and other sources (listed in accvi-data-sources.xlsx) <strong><em>accvi-data-sources.xlsx</em></strong>: data sources used for ACCVI indicators <em><strong>zenodo_data_dictionary.csv</strong></em>: names and definitions of variables used in data files
DOI: 10.3886/e139921
title: Replication Material HKS2021 JIE

description: This material replicates the article "The Social Cost of Carbon in a Non-Cooperative World" by Hambel, Kraft, Schwartz (2021)
DOI: 10.3886/e139921v1
title: Replication Material HKS2021 JIE

description: This material replicates the article "The Social Cost of Carbon in a Non-Cooperative World" by Hambel, Kraft, Schwartz (2021)
DOI: 10.6084/m9.figshare.14544336
title: Procrastination and self-perceived employability

description: We explore factors relating to under-performance of Polish students in attaining employment relevant to their qualification level, relating to procrastination and self-perceived employability; with the aim of informing curriculum design and policy development.
DOI: 10.6084/m9.figshare.14544339
title: Molecular Dynamic Simulation Data Analysis

description: Analysis of global and residue movement of each SOX protein with or without DNA
DOI: 10.6084/m9.figshare.14544339.v1
title: Molecular Dynamic Simulation Data Analysis

description: Analysis of global and residue movement of each SOX protein with or without DNA
DOI: 10.3886/e119726v3-85882
title: Data and Code for: Impacts of Private Prison Contracting on Inmate Time Served and Recidivism

description: This is the replication kit for "Impacts of Private Prison Contracting on Inmate Time Served and Recidivism."<br><br>
description: All adult male inmates in Mississippi from April 1996 through July 2013 with sentences between 1 and 11 years.<br>.
description: <br>Data were obtained through a Freedom of Information Act to the Mississippi Department of Corrections; the data request file is in the folder.<br>
DOI: 10.5517/ccdc.csd.cc22gwn3
title: CCDC 1920935: Experimental Crystal Structure Determination

description: Related Article: Rebeca G. Castillo, Anselm W. Hahn, Benjamin E. Van Kuiken, Justin T. Henthorn, Jeremy McGale, and Serena DeBeer|2021|Angew.Chem.,Int.Ed.|60|10112|doi:10.1002/anie.202015669
DOI: 10.5517/ccdc.csd.cc25szpn
title: CCDC 2020012: Experimental Crystal Structure Determination

description: Related Article: Sayan Sarkar, Piyali Sarkar, Sandip Munshi, Pradyut Ghosh|2021|Chem.-Eur.J.|27|7307|doi:10.1002/chem.202005397
DOI: 10.5517/ccdc.csd.cc25szqp
title: CCDC 2020013: Experimental Crystal Structure Determination

description: Related Article: Sayan Sarkar, Piyali Sarkar, Sandip Munshi, Pradyut Ghosh|2021|Chem.-Eur.J.|27|7307|doi:10.1002/chem.202005397
DOI: 10.5517/ccdc.csd.cc25wd2k
title: CCDC 2022318: Experimental Crystal Structure Determination

description: Related Article: Rebeca G. Castillo, Anselm W. Hahn, Benjamin E. Van Kuiken, Justin T. Henthorn, Jeremy McGale, and Serena DeBeer|2021|Angew.Chem.,Int.Ed.|60|10112|doi:10.1002/anie.202015669
DOI: 10.5517/ccdc.csd.cc26qcs3
title: CCDC 2047295: Experimental Crystal Structure Determination

description: Related Article: Tatiana Suárez-Rodríguez, Ángel L. Suárez-Sobrino, Alfredo Ballesteros|2021|Chem.-Eur.J.|27|7154|doi:10.1002/chem.202005348
DOI: 10.5281/zenodo.4499183
title: Drivers of uncertainty in future projections of MJO teleconnections: Data for figures

description: This dataset contains data that can be used to reproduce the figures in<br> Jenney et al., (2021) "Drivers of uncertainty in future projections of MJO teleconnections". Most of the files are Matlab structures as described below I. Output from linear baroclinic model (LBM): Geopotential height at 500 hPa<br> description: LBM output for experiments with control MJO and varied <br> mean states<br> name: "z500_&lt;model_name&gt;.mat"<br> format: matlab structure "out" with <br> fields: <br> ThVh (historical dry static energy & historical winds)<br> ThVs (historical dry static energy & future winds)<br> TsVh (future dry static energy & historical winds)<br> TsVs (future dry static energy & future winds)<br> dimensions:<br> [30 x 128 x 64 x 59] = <br> [ensemble member x lon x lat x simulation day] II. Output from linear baroclinic model (LBM) for MJO perturbed experiments<br> name: "&lt;EXPERIMENT&gt;_z500_&lt;model&gt;.mat"<br> experiments: <br> EAST20: 20-degree eastward shifted thermal forcing<br> MEDIUM: lower bound of increased prop. speed experiment<br> FAST: upper bound of increased prop. speed experiment<br> WAVENO: perturbed wavenumber experiment (decreased wavenumber)<br> format, fields, & dimensions: files with format identical to I III. Linearized Rossby wave source<br> name: "rws.mat"<br> format: matlab structure "rws"<br> fields & dimensions: these are described and listed in the structure IV. Stationary Rossby wave number<br> description: K_s computed for individual CMIP6 model mean states and for<br> the multi-model mean wind<br> name: "Ks.mat"<br> format: matlab structure "Ks_struct"<br> fields & dimensions: described and listed in the structure V. Model global mean surface temperature<br> description: global mean surface temperature for individual CMIP6 models<br> for the historical and future periods<br> name: "mmGlobalSfcTemp.nc"<br> format: netcdf file VI. Tropical mean temperature profile<br> description: Tropical mean temperature profile (20S to 20N) for individual CMIP6 models<br> name: "tropical_mean_temp.mat"<br> format: Matlab structure "trop_mean_temp"<br> fields & dimensions: described and listed in the structure VII. Propagating forcing<br> description: Propagating MJO-like idealized thermal forcing used to force the LBM. <br> name: <br> "movT_weak.grd": control forcing<br> "movT_weak_&lt;EXPERIMENT&gt;.grd": perturbed MJO cases, naming convention described in II<br> format: binary (.grd file)<br> notes: Use Matlab script "read_forcing.m", also included, to read and plot the files.
DOI: 10.25345/c5z532
title: MassIVE MSV000087365 - GNPS_Untarget metabolomic analyses of Aspergillus fumigatus sirtuin knockout strains
title: Aspergillus fumigatus sirtuins knockout mutants metabolomics.
DOI: 10.6084/m9.figshare.14544378
title: SOX variants

description: COSMIC and gnomAD variants for SOX genes
DOI: 10.6084/m9.figshare.14544378.v1
title: SOX variants

description: COSMIC and gnomAD variants for SOX genes
DOI: 10.5281/zenodo.4739568
title: Data Set of Channel Simulations of an Urban Platooning Scene at the 'Leipziger Platz' at the City Center of Berlin

description: This archive contains simulation data corresponding to platoon simulation at the "Leipziger Platz" in the city center of Berlin at 60 GHz.<br> Two platoons of 10 vehicles each drive towards each other. The cars/trucks of the lower platoon act as transmitters, the vehicles of the upper platoon have each receiving antennas mounted at 0.5m at the front bumper. Two antenna setups were evaluated: one omnidirectional pattern as well as one additional antenna whose pattern is shown in detail in the directory.
DOI: 10.5281/zenodo.4739567
title: Data Set of Channel Simulations of an Urban Platooning Scene at the 'Leipziger Platz' at the City Center of Berlin

description: This archive contains simulation data corresponding to platoon simulation at the "Leipziger Platz" in the city center of Berlin at 60 GHz.<br> Two platoons of 10 vehicles each drive towards each other. The cars/trucks of the lower platoon act as transmitters, the vehicles of the upper platoon have each receiving antennas mounted at 0.5m at the front bumper. Two antenna setups were evaluated: one omnidirectional pattern as well as one additional antenna whose pattern is shown in detail in the directory.
DOI: 10.6084/m9.figshare.3761562.v1860
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.21227/36g6-r506
title: OMHS - The Objects Mosaic Hyperspectral Database

description: The Objects Mosaic Hyperspectral Database contains 10,666 hyperspectral cubes of size 256x256x29 in the 420-700nm spectral range. This original hyperspectral database of real objects was experimentally acquired as described in the paper "SHS-GAN: Synthetic enhancement of a natural hyperspectral database", by J. Hauser, G. Shdendal, A. Zeligman, A. Averbuch, and M. Nathan, in the IEEE Transactions on Computational Imaging.In addition, the database contains the SHS-GAN algorithm, which enables to generate synthetic database of hyperspectral images.
DOI: 10.6084/m9.figshare.14544381
title: Post-drought groundwater storage recovery in California’s Central Valley

description: This package includes all the representative data used in the analyses in the paper entitled "Post-drought groundwater storage recovery in California’s Central Valley "
DOI: 10.6084/m9.figshare.14544381.v1
title: Post-drought groundwater storage recovery in California’s Central Valley

description: This package includes all the representative data used in the analyses in the paper entitled "Post-drought groundwater storage recovery in California’s Central Valley "
DOI: 10.5519/qd.xihthln6
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (19 records)
DOI: 10.5519/qd.5mf6tu9z
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3 records)
DOI: 10.5519/qd.dgy307wl
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (443 records)
DOI: 10.5519/qd.6j1nngnq
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (24 records)
DOI: 10.6084/m9.figshare.13664519
title: Andromeda: A Dataset of Ansible Galaxy Roles and Their Evolution

description: A dataset of Ansible Galaxy metadata, repository metadata, and structural models and distilled structural changes of Ansible roles.<br>Full documentation of the dataset can be found in DOCS.md.GalaxyMetadata contains YAML files with metadata on Ansible Galaxy entities.RepositoryMetadata contains YAML files with commits and tags for repositories in Galaxy.StructuralModels contains YAML files with structural models representing Ansible roles.StructuralRoleEvolutions contains YAML files with change sets extracted from consecutive versions of roles.<br>Data collected on 2021/01/20.<br>Presented in a data showcase paper: R. Opdebeeck, A. Zerouali, C. De Roover. "Andromeda: A Dataset of Ansible Galaxy Roles and Their Evolution", in MSR'21, 2021.<br>
DOI: 10.6084/m9.figshare.13664519.v1
title: Andromeda: A Dataset of Ansible Galaxy Roles and Their Evolution

description: A dataset of Ansible Galaxy metadata, repository metadata, and structural models and distilled structural changes of Ansible roles.<br>Full documentation of the dataset can be found in DOCS.md.GalaxyMetadata contains YAML files with metadata on Ansible Galaxy entities.RepositoryMetadata contains YAML files with commits and tags for repositories in Galaxy.StructuralModels contains YAML files with structural models representing Ansible roles.StructuralRoleEvolutions contains YAML files with change sets extracted from consecutive versions of roles.<br>Data collected on 2021/01/20.<br>Presented in a data showcase paper: R. Opdebeeck, A. Zerouali, C. De Roover. "Andromeda: A Dataset of Ansible Galaxy Roles and Their Evolution", in MSR'21, 2021.<br>
DOI: 10.17894/ucph.7bb48bed-0019-4b39-9059-0cf1fcc89781
title: Data for the figures shown in the rebuttal by Jensen et al 2021 Journal of Physiology
DOI: 10.17632/dvc5zp98rm.1
title: Data for: A Hybrid Approach of Adaptive Wavelet Transform, Long Short-Term Memory and ARIMA-GARCH Family Models for the Stock Index Prediction

description: data
DOI: 10.5281/zenodo.4739695
title: CoVaxxy Tweet IDs data set

description: A collection of Tweet IDs related to Covid-19 Vaccines, gathered from Twitter since Jan 4, 2021. Please see https://arxiv.org/abs/2101.07694 for more information.
DOI: 10.6084/m9.figshare.14544540
title: Annotation of partial list of proteins profiled from Salmonella typhimurium in MALDI-TOF mass spectrometry microbial identification

description: Matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS) has been shown to be a reliable tool for rapid identification of microbes down to the species level. But, many of the mass peaks in mass spectra of microorganisms remain to be annotated. This work presents a partial list of annotated proteins from the MALDI-TOF mass spectrum of <i>Salmonella typhimurium</i>. Reference proteome database used for the annotation workflow comes from UniProt, and an in-house MATLAB mass spectrum annotation software was used in annotating the profiled mass peaks. Results indicated good annotation of mass peaks with small errors ranging from 2 to 10 Da. Such errors could be accounted by mass accuracy of the mass spectrometer used or protein post-translational modification such as methylation. Proteins annotated include: Fels-2 prophage protein, 50S ribosomal protein L31, Glutaredoxin, and Gifsy-2 prophage excisionase. Presence of prophage protein in the annotated peak list meant that prophage genes are likely expressed in <i>S. typhimurium</i>, which holds significant implications for our understanding of cellular physiology, as well as possible roles of prophage proteins in pathophysiology of the intracellular bacterium. Overall, efforts to annotate the MALDI-TOF mass spectrum of <i>S. typhimurium</i> offers a glimpse into its cellular physiology and gene expression profile, that could, in theory, be replicated to other microorganisms to yield new insights in microbial cell biology, as well as expand our understandings of proteins possibly involved in pathogenesis in microbial pathogens.
DOI: 10.6084/m9.figshare.14544540.v1
title: Annotation of partial list of proteins profiled from Salmonella typhimurium in MALDI-TOF mass spectrometry microbial identification

description: Matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS) has been shown to be a reliable tool for rapid identification of microbes down to the species level. But, many of the mass peaks in mass spectra of microorganisms remain to be annotated. This work presents a partial list of annotated proteins from the MALDI-TOF mass spectrum of <i>Salmonella typhimurium</i>. Reference proteome database used for the annotation workflow comes from UniProt, and an in-house MATLAB mass spectrum annotation software was used in annotating the profiled mass peaks. Results indicated good annotation of mass peaks with small errors ranging from 2 to 10 Da. Such errors could be accounted by mass accuracy of the mass spectrometer used or protein post-translational modification such as methylation. Proteins annotated include: Fels-2 prophage protein, 50S ribosomal protein L31, Glutaredoxin, and Gifsy-2 prophage excisionase. Presence of prophage protein in the annotated peak list meant that prophage genes are likely expressed in <i>S. typhimurium</i>, which holds significant implications for our understanding of cellular physiology, as well as possible roles of prophage proteins in pathophysiology of the intracellular bacterium. Overall, efforts to annotate the MALDI-TOF mass spectrum of <i>S. typhimurium</i> offers a glimpse into its cellular physiology and gene expression profile, that could, in theory, be replicated to other microorganisms to yield new insights in microbial cell biology, as well as expand our understandings of proteins possibly involved in pathogenesis in microbial pathogens.
DOI: 10.6084/m9.figshare.14544510
title: source-data.xlsx

description: source data
DOI: 10.6084/m9.figshare.14544510.v1
title: source-data.xlsx

description: source data
DOI: 10.6084/m9.figshare.14544582
title: A Novel Hybrid of Nonlinear Sine Cosine Algorithm and Safe Experimentation Dynamics for Model Order Reduction

description: These are the supplemental data for the Model Order Reduction problem of the Flexible link Manipulator, Double Pendulum Overhead Crane and the 6th order systems transfer function.
DOI: 10.6084/m9.figshare.14544582.v1
title: A Novel Hybrid of Nonlinear Sine Cosine Algorithm and Safe Experimentation Dynamics for Model Order Reduction

description: These are the supplemental data for the Model Order Reduction problem of the Flexible link Manipulator, Double Pendulum Overhead Crane and the 6th order systems transfer function.
DOI: 10.5281/zenodo.4567675
title: Molecular phylogeny of Megasternini terrestrial water scavenger beetles (Hydrophilidae) reveals repeated continental interchange during Paleocene-Eocene thermal maximum

description: The dataset includes the complete alignments used for the analyses - for the Megasternini, Megasternini + wildcard taxa + Hydrophilidae (used for the time tree analysis). It also contains Supplement 3 with final dated trees for the Hydrophilidae.
DOI: 10.5281/zenodo.4567674
title: Molecular phylogeny of Megasternini terrestrial water scavenger beetles (Hydrophilidae) reveals repeated continental interchange during Paleocene-Eocene thermal maximum

description: The dataset includes the complete alignments used for the analyses - for the Megasternini, Megasternini + wildcard taxa + Hydrophilidae (used for the time tree analysis). It also contains Supplement 3 with final dated trees for the Hydrophilidae.
DOI: 10.6084/m9.figshare.14544621
title: Open-ended Questionnaire Responses-Social Cyncisim-converted.pdf

description: A qualitative study to investigate social cynicism in women in a sample of (n=20) young adult women through a focus group discussion and open-ended questionnaires. The data was analyzed by applying thematic analysis that generated five central themes.
DOI: 10.25345/c5tc0r
title: MassIVE MSV000087366 - Quantitative proteomics of Kluyveromyces marxianus
title: Quantitative proteomics of Kluyveromyces marxianus. Cell pellets were processed with sonication-based extraction method to collect proteins, which were then digested using filter-aided sample preparation (FASP) approach. The digestions were analyzed using nanoLC-Q Exactive MS/MS system. The label-free quantitation was performed using MaxQuant-Andromeda software suite.
DOI: 10.25442/hku.14497815
title: Supporting data for "Characterization of the Cancer Stemness Effect of gene MAEL on HCC"

description: Hepatocellular carcinoma is the worldwide health problem. According to analysis the RNA sequencing of three paired HCC and adjacent non-tumor samples, we found several oncogenes played critical roles in development and progression on HCC. Our previous study has demonstrated that gene MAEL was up-regulated in tumor samples compared with matched no-tumor smples. High expression of MAEL associated with HCC metastasis and poor overall survival rate. Functional study showed overexpression of MAEL increased cell growth, mobility, which medicated by AKT pathways activity and inducing EMT. Moreover, MAEL transfected cell upregulated stemness related gene and CSC surface markers in mRNA level as well as enriched CD133 percentage. The dataset includes the Flow cytometry results, IF staining, In vitro functional studies, tumor formation in nude mice, Sorafenib treatment ELISA and RNA-Seq as the data information txt of each file folder/
DOI: 10.25442/hku.14497815.v1
title: Supporting data for "Characterization of the Cancer Stemness Effect of gene MAEL on HCC"

description: Hepatocellular carcinoma is the worldwide health problem. According to analysis the RNA sequencing of three paired HCC and adjacent non-tumor samples, we found several oncogenes played critical roles in development and progression on HCC. Our previous study has demonstrated that gene MAEL was up-regulated in tumor samples compared with matched no-tumor smples. High expression of MAEL associated with HCC metastasis and poor overall survival rate. Functional study showed overexpression of MAEL increased cell growth, mobility, which medicated by AKT pathways activity and inducing EMT. Moreover, MAEL transfected cell upregulated stemness related gene and CSC surface markers in mRNA level as well as enriched CD133 percentage. The dataset includes the Flow cytometry results, IF staining, In vitro functional studies, tumor formation in nude mice, Sorafenib treatment ELISA and RNA-Seq as the data information txt of each file folder/
DOI: 10.25345/c5pn89
title: MassIVE MSV000087367 - Quantitative proteomics of Syn1.0 cells
title: Cell pellets were processed with sonication-based extraction method to collect proteins, which were then digested using filter-aided sample preparation (FASP) approach. The digestions were analyzed using nanoLC-Q Exactive MS/MS system. The label-free quantitation was performed using MaxQuant-Andromeda software suite.