cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/f35c6xzzcm
title: Open STM: A low-cost scanning tunneling microscope with a fast approach method

description: In this paper, we have designed a low-cost scanning tunneling microscope (STM) priced at 300 USD or 2000 CNY. This microscope is suitable for educational purposes and low-demand research imaging at the nanometer level. This microscope's motion components and scanner are controlled using piezoelectric materials, avoiding the thermal drift associated with traditional motor control. Our tip approach algorithm, which considers the capacitance and friction characteristics during piezoelectric slider movement, has reduced the time required for sample loading to establish tunneling current to approximately 1 minute. The dimensions of the microscope body are 45×45×31.5mm(W ×L×H), and the control voltage does not exceed 15V, ensuring the safety of operators with limited experience. In the performance verification, we performed a scanning tunneling scan on a Highly Oriented Pyrolytic Graphite(HOPG) sample with bias voltages of 50mV and 60mV, resulting in clear observations of the atomic features of HOPG in the STM pattern. • 3D Models The STM body is predominantly manufactured through CNC machining of aluminum blocks. A total of 7 components need to be machined. We provide the original Solidworks design and STEP files for manufacturing in this folder. Drill information is documented in the corresponding PDF files. • PCB The STM includes eight PCBs, three utilized for the microscope's control unit, one for the pre-amplifier, and four for circuitry interconnection. The PCBs were designed using EasyEDA(Or JLC EDA in China), and this folder includes project files, schematics, and Gerber files for PCB manufacturing. • HardwareCode The central controller for the circuit control section employs the ESP32-WROOM-32E-N8 microcontroller module. This folder contains the microcontroller firmware and source code (written using the ESP-IDF framework with PlatformIO). • PythonScript This folder includes supervisory software written in Python. Install the libraries(with specific versions) and launch the software by running “launch.bat” or via the command line “python main.py”. All software source code(/PythonScript) is licensed under GPLv3. (https://www.gnu.org/licenses/gpl-3.0.en.html) Everything else is licensed under CC-BY-SA-4.0. (https://creativecommons.org/licenses/by-sa/4.0)
DOI: 10.6084/m9.figshare.24970341.v1
title: Paper Towel Method Dataset

description: Hibernation Science Methods
DOI: 10.6084/m9.figshare.28777106.v1
title: <b>EFFECT OF QUALIFICATION FOR COURSE APPROVAL AND SPONSORSHIPS IN POLICE PROFESSIONAL DEVELOPMENT IN ISIOLO COUNTY, KENYA</b>

description: Despite the Administration Police Officers enjoying its association with a great number of academic institutions and scholars of all calibers, it suffers greatly from the exit of police officer’s from service due to unmet expectations, uneven criteria for awarding sponsorships, unclear implementation of training policy, and lack of evaluation programs to mention just but a few. This study sought to establish how qualifications for course approval and sponsorships in the training policy. The study was steered by the Herzberg’s Theory and Human Capital Theory. The study used stratified random sampling and a descriptive survey approach. Within Isiolo County, the target population was 300 Administration Police Officers. Four categories were used to classify the target population: Inspectorate members, Gazetted officers (GOs), Constables, and Noncommissioned officers (NCOs). There were 90 police officers in the sample. In order to gather the primary data, structured interview questions and secondary data from library research were used. The collected data was arranged according to the study questions and particular goals by coding, tabulating, and interpreting. Data was analyzed and presented using graphs, frequency tables, and percentages. Both quantitative and qualitative data analysis was done. Tables and figures as well as a narrative presentation of the findings were used. The study outcomes indicated that there was a positive statistical significant correlation between qualification and sponsorships in the training policy on professional police development of Police officers (r=0.622, p&lt;0.05). Across all forces, the learning delivery should be standardized, especially the first training for newly hired officers. The training techniques used should guarantee that the trainees' learning needs are addressed and that skills related to workplace situations are transferred. The report suggested that Isiolo County CIPU Headquarters create and put into place efficient training programs. Although a framework for training policies already exists, it is advised that it be periodically reviewed and compared to institutions both locally and abroad in order to remain current and satisfy the needs of the stakeholders.
DOI: 10.6084/m9.figshare.5028773.v1
title: GP_library_eV.zip

description: 50,000 Hamiltonian matrices describing FMO-like multi-chromophore systems. These are represented as 8x8 matrices, stored as comma separated values in electronvolts. Each matrix has been calculated with an atomic transition charge method, and relates to a structure obtained from the canonical Fenna-Matthews-Olson complex through rigid geometric perturbations of the chromophores. <br>Please see linked paper for more information.The off-diagonal entries should be scaled by a dielectric factor f=0.8, and the diagonal entries replaced with [1.43198,1.4150,1.40496,1.41797,1.41797,1.42802,1.42591,1.42405] to make them consistent with our paper.
DOI: 10.6084/m9.figshare.1038837.v2
title: A high resolution gene expression map

description: This is Supplemnetary file 2 which contains Supplementary Tables 1 through 7, 11 and 12
DOI: 10.6084/m9.figshare.4633390.v1
title: Monarch images

description: Images used to support Hamm 2017 pre-print on the haplotype of Monarch butterflies (<i>Danaus plexippus</i>).
DOI: 10.17632/jzh4x3svv5
title: UAV-based multispectral images of spring wheat

description: The experiments were conducted at the Agriculture Experimental located south of Brazil, from May to October in 2018. The study area contains several 2.5m x 1m rectangular parcels, referred to as plots, which hold two Brazilians wheat varieties. The genotypes used were TBIO Toruk and BRS Parrudo (48 Toruk plots and 40 Parrudo plots). Variability in the growth of the crops was created for all test areas, where each one received a varying quantity of nitrogen. Different Nitrogen (N) rates were chosen to generate crop growth variability, to evaluate the response of biomass and grain yield to N availability, which we called spatial variability. The database consists of images captured by Unmanned Aerial Vehicles (UAV) and biomass manual measurements.

Two different processes were used to create this dataset. In the first, we collected the biomass to make a ground-truth. This step is done manually and destructively. Shoot dry biomass was determined at three growth stages: the stage of six fully expanded leaves, referred herein as V6, three nodes, and at flowering by the collecting of plants in an area of 0.27 m² for each plot. This was done to create a temporal variability. The plants collected were oven-dried at 65ºC until constant weight and weighed. Then the value is extrapolated for kilograms/hectare (Kg/ha). That is the BIOMASS value in  the CSV file.

The second process was to acquire the images at the height of 50m above ground using a camera coupled to a DJI Matrice 100 Quadcopter to obtain images with a ground sample distance (GSD) of 0.0465m. The camera mounted in the UAV was a multispectral Parrot Sequoia MicaSense (2018) for agricultural applications that is independent of the UAV systems. This multispectral camera has four independent monochrome channels (1280 x 960, 10 bits per pixel). The single grid flight plan for image acquisition was used in this work, being a common setup used by UAV flight control applications when mapping terrain used in agriculture Pix4d (2019). The frontal and lateral overlaps between images were adjusted to 80% and 60%, respectively, which is controlled by the camera itself using an internal GNSS trigger. Post-processing of the acquired images includes georeferencing and orthomosaic generation.
DOI: 10.21942/uva.16780204.v1
title: Data set belonging to Verbeij et al. (2021). Self-Reported Measures of Social Media Use Show High Predictive Validity

description: These data sets belongs to:<br>Verbeij, T., Pouwels, J. L., Beyens, I., & Valkenburg, P. M. (2021). Self-Reported Measures of Social Media Use Show High Predictive Validity.<br>The preregistration of the design, sampling and analysis plan of the study, as well as all syntax files and online supplemental materials are available on the Open Science Framework (OSF) at https://osf.io/4gaqk/.<br><br>The .csv files are used for the analyses in R. The .dat files for the analyses in Mplus. The variable names of the .dat file could be find in the Mplus input file.<br>For more information, please contact the authors at t.verbeij@uva.nl or info@project-awesome.nl.
DOI: 10.25452/figshare.plus.17869013.v1
title: Back color images supporting "Functional movement screen dataset collected with two Azure Kinect depth sensors"

description: This is color images of Azure Kinect sensor in back position. <br> This dataset supports the following publication: Xing, QJ., Shen, YY., Cao, R. et al. Functional movement screen dataset collected with two Azure Kinect depth sensors. Sci Data 9, 104 (2022). https://doi.org/10.1038/s41597-022-01188-7 <br>See related materials in collection at: https://doi.org/10.25452/figshare.plus.c.5774969 <br>Collection Description: This presents a dataset for vision-based autonomous functional movement screen (FMS) collected from 45 human subjects of different ages (18-59 years old) executing the following movements: deep squat, hurdle step, in-line lunge, shoulder mobility, active straight raise, trunk stability push-up, and rotary stability. Specifically, shoulder mobility was performed only once by different subjects, while the other movements were repeated for three episodes each. Each episode was saved as one record and was annotated from 0 to 3 by three FMS experts. The main strength of our database is twofold. One is the multimodal data provided, including color images, depth images, and 3D human skeleton joints. The other is the multiview data collected from the two synchronized Azure Kinect sensors in front of and on the side of the subjects. Finally, three-dimensional trajectories, quaternions, and 2D pixel trajectories of 32 joints were recorded. Our dataset contains a total of 1812 recordings, with 3624 episodes. The size of the dataset is 158 GB. As a supplement, we also provide color image data from the other two cameras (back and side low positions). This dataset provides the opportunity for automatic action quality evaluation of FMS.
DOI: 10.6084/m9.figshare.24499930.v1
title: 3DSC_MP

description: This is the entire 3DSC based on structures of the Materials Project. The csv contains information on each superconductor and the cifs folder contains the crystal structures.
DOI: 10.6084/m9.figshare.27628400.v1
title: Final_Code.R from The evolution of post-infection mortality

description: Code to reproduce the figures
DOI: 10.60893/figshare.apl.28645742.v1
title: Supplement Number 1

description: Experimental Section, Structural, morphological, and compositional characterization, Electrochemical Characterizations, and Electrochemical Calculations. Stepped Potential Electrochemical Impedance Spectroscopy (SPEIS). EDS of W2N and TiN. HRTEM image of W2N. Electrochemical graphs and discussion of TiN TFE. Phase plot of W2N. Areal Ragone plot, and Literature Comparison table of ASC device.
DOI: 10.6084/m9.figshare.23361002.v3
title: Fire Ecology Traits for Plants: Database snapshot (SQL dump)

description: The <b>Fire Ecology Traits for Plants</b> is a database for the study of plant responses to fire. We used this database to describe the fire-related traits of the flora of New South Wales, Australia.Quantification of these traits encompass several levels of data abstraction scaling up from field observations of individual responses, to aggregated population responses and general categories of species responses. The database is designed to link trait data and event information at these levels using: concise and documented trait and method vocabularies; documented uncertainty in observations and aggregation; documented lineage of the records.This dataset includes a complete export of the database structure and data as a SQL dump.<b>Version 1.1</b> of the database was created a populated using PostgreSQL version 16.4, and exported using pg_dump version 16.4.
DOI: 10.17632/r54zh37mc7
title: MyTextSum : Malay Text Summarization Dataset

description: The dataset consists of 100 news articles covering Natural Disaster and Events domains in Malaysia. The news articles are formatted in XML following the DUC 2002 text summarization dataset preparation. The total of 300 human summaries from 3 domains experts are included for summary evaluation. Our MyTextSum model with the application of Pattern-Growth Sentence Compression technique has shown promising results of F-Measure score of 0.5752 agreements when evaluated against human summaries and perform better than the Baselines (uncompressed) model.

Citation Reference:

Alias, S., Sainin, M. S., & Mohammad, S. K. (2020). Model Peringkasan Teks Ekstraktif Dwibahasa menggunakan Fitur Kekangan Corak Tekstual (Bilingual Extractive Text Summarization Model using Textual Pattern Constraints). GEMA Online® Journal of Language Studies, 20(3).

Alias S., Mohammad S.K., Gan K.H., Ping T.T. (2018) MYTextSum: A Malay Text Summarizer Model Using a Constrained Pattern-Growth Sentence Compression Technique. In: Alfred R., Iida H., Ag. Ibrahim A., Lim Y. (eds) Computational Science and Technology. ICCST 2017. Lecture Notes in Electrical Engineering, vol 488. Springer, Singapore. https://doi.org/10.1007/978-981-10-8276-4_14
DOI: 10.17632/zrz3g2s8rm
title: Data for article "Assessment of soil heavy metal pollution and its ecological risk for city-parks, vicinity of a landfill, and an industrial area within Guangzhou City"

description: The dataset includes contents of heavy metals Cu, Zn, Ni, Pb, Cr, Cd, As, and Hg of soil samples collected from city-parks, vicinity of a landfill, and an industrial area within Guangzhou city.
DOI: 10.6084/m9.figshare.24807792.v2
title: Supporting data for "New genome reveals molecular signatures of adaptation to nocturnality in moth-like butterflies (Hedylidae)"

description: This data repository include all the data required to repeat the analyses in the genome project of <i>Macrosoma leucophasiata</i>. The preprint paper can be found in BioRxive: (<b>doi:</b> https://doi.org/10.1101/2023.11.21.568084)
DOI: 10.17632/my2z7dvk9j
title: Datasets "Oocyte maturation under lipotoxic condition induces carryover transcriptomic and functional alterations during post-hatching development of good quality blastocysts: novel insights from a bovine embryo-transfer model""

description: Objective: To study post-hatching development after transfer of morphologically good quality embryos that survived in vitro maturation under lipolytic conditions using a well-established and recognized bovine model. Intervention(s): Bovine cumulus oocyte complexes (COCs) were in vitro matured in the presence of either 1) a combination of elevated pathophysiological concentration of palmitic acid (PA) and physiological concentrations of stearic acid (SA) and oleic acid (OA) (HIGH PA), or 2) physiological concentrations of PA, SA and OA (BASAL). Matured oocytes were fertilized and cultured in FA-free conditions until day 7.7 p.i. Equal proportions of normal and expanded blastocysts were subsequently transferred to synchronized cows. Conceptuses were transcervically recovered 7 days after the transfer. Main Outcome Measure(s): Recovered embryos were morphologically assessed and dissected into embryonic disc (ED) and extraembryonic tissue (EXT). Samples of EXT were used for analysis of interferon-τ (IFN-τ) secretion and measurement of cellular metabolic activity. ED and EXT samples were subjected to RNA sequencing in order to evaluate the genome wide transcriptome patterns of recovered day 14 embryos. Results: Recovered embryos resulting from metabolically compromised oocytes were retarded in growth or less elongated than their control counterparts. Furthermore, they exhibited a decrease in glucose consumption and lactate production. Importantly, lipolytic conditions resulted in reduced capacity of the embryo to signal its presence to the mother through IFN-τ secretion. The transcriptome profile was altered in the recovered embryos with main effects in pathways related to redox-regulating mechanisms, apoptosis, cellular growth, interaction and differentiation, energy metabolism, and epigenetic mechanisms. Design transcriptome analysis: A total of 53 samples (extraembryonic tissue (EX) and embryonic discs (ED)) were used for RNA/DNA extraction, representative for the pool of recovered day 14 embryos, the embryo morphology, the recipient cows (embryos from one of the eight cows were excluded for RNA sequencing) and replicates. The lists of differentially expressed genes (DEGs) were analyzed in Ingenuity Pathways Analysis software (IPA; Ingenuity Systems, Qiagen), which served to identify canonical pathways and molecular functions that were differentially expressed in the high PA group compared to BASAL. An adjusted P-value of &lt; 0.05 was set to identify genes included in the analysis. In addition, a gene set enrichment analysis (GSEA) was performed on the ranked log-fold changes of the DEG list with the GSEA tool on the gene ontology assignments from Ensembl for Bos Taurus UMD3.1 with the default FDR of &lt; 25%.
DOI: 10.17632/nk862bmjpx
title: data set for the order picking and rack scheduling problem (OPRSP) in RMFS

description: The provided data set includes key elements relevant to the order picking and rack scheduling problem (OPRSP) experiments involving different warehouse scales: small, medium, and large.
DOI: 10.4121/21739355.v1
title: Data underlying the master thesis: Exploring Copula-Based Models for the Stochastic Simulation of Information Retrieval Evaluation Data

description: This dataset contains the results of the experiments that I ran for my master thesis. The full code (and more) can be found at https://github.com/dimitris93/msc-thesis
DOI: 10.6084/m9.figshare.13625576.v1
title: Dose-response data_final_SIMAH.csv

description: The data was collected as part of a systematic literature review conducted in Embase, MEDLINE, PsycINFO, and Web of Science, including all studies on socioeconomic inequalities in alcohol-attributable mortality published until the last week of August 2020. The data are shown in a csv format including information on the ID of the study and each result package, the reference, country of origin of the data, time of assessment, sample descriptors and results.
DOI: 10.6084/m9.figshare.28261745.v2
title: Pramanik et al. 2025_ Supplementary Data and Tables

description: The study investigates the influence of basal media composition and amino acid supplementation on the morphological development and metabolic profiling of <i>Alocasia cuprea</i> callus cultures. The primary objective was to evaluate how specific media and amino acids affect callus proliferation, differentiation, and bioactive metabolite production. The morphological development and metabolic changes in <i>Alocasia cuprea</i><i> </i>callus cultures induced by basal media and amino acid supplementation are discussed. The medium composition strongly affected callus proliferation and differentiation: compact organogenic callus was induced in TB9 [Murasighe and Skoog medium (MS) with the addition of 2 mg/l thidiazuron (TDZ) and 1 mg/l 6-benzyl amino purine (BAP)], whereas IA9 [MS supplemented with 2 mg/l TDZ and 1 mg/l 2,4-D] induced embryogenic callus with a distinct morphology. Among amino acids, L-arginine, in combination with TB9, gave maximum biomass and shoot initiation, while L-cysteine supported embryogenesis on IA9 but inhibited shoot development.Metabolic profiling through GC-MS performed significant differences in the production of bioactive compounds. Treatment IA9 induced diversity in metabolites produced in comparison to TB9. Such key compounds were squalene, which was highly produced in TB9 with L-asparagine, whereas IA9 was dominated by octadecadienoic acid. PCA and heatmap clustering highlighted the activation of targeted biosynthetic pathways by specific culture conditions, supportingthe production of desirable bioactive compounds. The heatmap also revealed the similarities in bioactive compound profiles among specific callus samples. Among the bioactive metabolites, the identification of squalene is particularly notable for its commercial applications. Future studies should explore genetic and metabolic engineering approaches to enhance the biosynthesis of high-value metabolites.
DOI: 10.6084/m9.figshare.29125847.v1
title: Media’s role in the crisis: a discursive comparison of U.S. media representation of unemployment in 2008 and 2020

description: This study employs a corpus-based, quantitative analysis of topoi in American newspapers during the 2008 financial crisis and the 2020 COVID-19 pandemic to compare media representations of unemployment.By examining the effectiveness of media strategies in addressing unemployment, this study contributes to a deeper understanding of the interplay between media, discourse analysis, and crisis management during major economic disruptions.
DOI: 10.17632/vkkw8gsvdg
title: Color Biogenesis of Tomatoes

description: Controlled postharvest stresses were used to induce the synthesis of carotenoids in tomato fruit. The accumulation of carotenoids was observed by the change of color of the tomato fruit from green to red. This change of color was monitored by the a* value and hue of the CIELAB* color coordinates in which the a* value increased following a sigmoidal curve and hue decreased in a similar trend. This sigmoidal curve marked the transition from chloroplasts to chromoplasts; in other words, the change of color tracked the disorganization or degreening, which was simultaneously accompanied by chromoplast biogenesis or red color development when tomatoes were at the Turning stage of development. The color data and photographic images provides information on how heat stress affected the synchronicity of chloroplast disorganization and chromoplast biogenesis in the early developmental stages of tomato ripening.
DOI: 10.6084/m9.figshare.15001398.v1
title: Live reptile smuggling is predicted by trends in the legal exotic pet trade

description: Dataset and code from "Live reptile smuggling is predicted by trends in the legal exotic pet trade", by Stringham OC, García‐Díaz P, Toomes A, Mitchell L, Ross JV, Cassey P. Submitted to peer review, pre-print: https://ecoevorxiv.org/t42fd/<br>
DOI: 10.6084/m9.figshare.15167982.v1
title: Database For E-Wallet Adoption in Malaysia

description: A dataset comprises the respondents feedback based on the questionnaire distributed through social media platform in examine the determinants that affect the adoption of E-wallet in Malaysia during the Covid-19 pandemic.
DOI: 10.6084/m9.figshare.22574020.v1
title: Supplementary materials for case studies

description: Supplementary materials for case studies
DOI: 10.6084/m9.figshare.29115077.v1
title: 2025 KNM SuppFigure.pdf

description: Supplementary figure and tables for "Dapagliflozin in addition to Ramipril Ameliorates Kidney Disease Progression in Mice with Alport Syndrome" by Miyata, et al.
DOI: 10.17632/cz9zsyytkz
title: Dissecting communities of renewable energy. A comparative investigation in New Aquitaine (France)_Colombarolli&Storti

description: Data on population density and standard of living; Interview – Preliminary Template; Standard Interview Grid for CREOs’ members