cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.8s848u
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Guatemala",
 "DatasetKey is Herbario de la Universidad Industrial de Santander"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0249549-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/rvubqs
title: martell_analyze_raw-pheno.Rmd

description: Script for gathering and cleaning raw phenotypic data from Martell_2_years.csv and Compilation pop entrainement 2022.xslx tables. It determines the threshold of outliers for some variables and generatesTable S3.
DOI: 10.57745/qeddzd
title: prepare_dat_genom_pred.Rmd

description: Script for gathering genomic and BLUP data for genomic prediction for Martell population. It keeps only common genotypes and consitutes the training and the validation sets. It generates the Figure S1.
DOI: 10.15468/dl.upznpk
title: Occurrence Download

description: A dataset containing 184 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Montiopsis trifida (Hook. & Arn.) D.I.Ford"
 ]
}

 The dataset includes 184 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043385-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/fabplx
title: genpred_CV_all_genos_models.Rmd

description: Script which implements within-population genomic prediction for the training population by cross-validation for all traits, with LASSO and GBLUP methods for EDGARR population.
DOI: 10.15468/dl.hzn7vg
title: Occurrence Download

description: A dataset containing 17164 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hydrilla verticillata (L.f.) Royle"
 ]
}

 The dataset includes 17164 records from 296 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0249590-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/zj6vsy
title: genpred_CV_all_genos_color.Rmd

description: Script which implements genomic prediction for berry color. It calculates predictive ability within the training population by cross-validation, then it predicts the color for the validation population.
DOI: 10.57745/p6yyco
title: explo_genovals_edgarr.Rmd

description: Script which studies the phenotypic structure based on deregressed BLUP data of the EDGARR population (from study_genetic_struct.Rmd script). It plots BLUP distributions and PCA for studying phenotypic structure (Figure S6).
DOI: 10.15468/dl.bujgh7
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pentalepis ecliptoides F.Muell."
 ]
}

 The dataset includes 90 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043393-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9crp2d
title: Occurrence Download

description: A dataset containing 203 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Treculia acuminata Baill."
 ]
}

 The dataset includes 203 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0260054-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/dagehx
title: extract_geno-values_BLUPs_edgarr_null_model.Rmd

description: Script for extracting genotypic values for all traits and deregressing BLUPs for the EDGARR population. It generates Table S4.
DOI: 10.57745/r0orih
title: selection_index_drg_predicted.Rmd

description: Script which loads deregressed predicted genotypic values and selects the best individuals based on a selection index, for the EDGARR population. It generates Figures 4, S10 and Tables S8, S9, and S11.
DOI: 10.15468/dl.y548gf
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Justicia aquatica Benoist"
 ]
}

 The dataset includes 13 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0260045-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/cbxytm
title: genpred_ValidSet_GBLUP_LASSO_drg.Rmd

description: Script which loads predicted genotypic values and deregresses it with the best method for all traits and the validation set of EDGARR population.
DOI: 10.57745/tjcozw
title: analyze_genom_pred_results.Rmd

description: Script which loads genomic prediction results of the EDGARR population computes the best method among GBLUP and LASSO and explores factors impacting predictive ability (generating Figure 3 and Figure S7).
DOI: 10.15468/dl.cnk854
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Porifera",
 "DatasetKey is Système d'Information sur la Nature et les Paysages d'Ile de France - Données du naturaliste Larregle Guillaume provenant de la base de donnée du SINP Île-de-France CETTIA",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-25.03991 31.75, 41.65954 31.75, 41.65954 71.53037, -25.03991 71.53037, -25.03991 31.75))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208265-230224095556074/datasets/export for details.
DOI: 10.57745/gqbugx
title: prepare_dat_genom_pred_across-pop.Rmd

description: Script which loads genomic and phenotypic data from half-diallel, diversity panel and EDGARR populations. It computes and saves the common SNPs and traits across populations for across-population genomic prediction.
DOI: 10.15468/dl.bnkhnu
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Justicia aristeguietae Leonard"
 ]
}

 The dataset includes 45 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0260058-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/jx8si3
title: genpred_across-pop_all_genos_models.Rmd

description: Scripts for applying genomic prediction in across-population for the different combinations (half-diallel and /or diversity panel to EDGARR). It generates the Figure 5.
DOI: 10.57745/fu1ae4
title: df_deregressed_blups_null_model_checked_1removed.tab

description: Table of deregressed BLUP data for genomic prediction, after the exclusion of one outlying genotype for the EDGARR population. It was generated by study_genetic_struct.Rmd script.
DOI: 10.15468/dl.y9myjd
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Colección de Paleobotánica del IANIGLA-CCT CONICET Mendoza: IANIGLA-PB"
 ]
}

 The dataset includes 53 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0231890-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/jxfjj2
title: edgarr_markers_genedose_formated_checked_3removed.tab

description: Table of genomic data for genomic prediction for training and validation populations, after the exclusion of 3 outlying genotypes for EDGARR population. It was generated by study_genetic_struct.Rmd script.
DOI: 10.15468/dl.jf7mu6
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Justicia bartlettii (Leonard) D.N.Gibson"
 ]
}

 The dataset includes 154 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0260071-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/gzv98q
title: martell_genpred_across-pop_all_genos_models.Rmd

description: Script for applying genomic prediction in across-population for the different combinations (half-diallel and /or diversity panel to Martell). It generates the Figure 5.
DOI: 10.15468/dl.3h82u3
title: Occurrence Download

description: A dataset containing 2638 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Evolvulus nummularius (L.) L."
 ]
}

 The dataset includes 2638 records from 204 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0208279-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hsndnx
title: Occurrence Download

description: A dataset containing 292 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "DatasetKey is Australian Antarctic Division Herbarium",
 "Geometry POLYGON((-77.65956 -72.87671,-44.19131 -72.87671,-44.19131 -59.15076,-77.65956 -59.15076,-77.65956 -72.87671))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 292 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010166-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/mqnjzm
title: martell_prepare_dat_genom_pred_across-pop.Rmd

description: Script which loads genomic and phenotypic data from half-diallel, diversity panel and Martell populations. It computes and saves the common SNPs and traits across populations for across-population genomic prediction.
DOI: 10.57745/jqitxv
title: martell_analyze_genom_pred_results.Rmd

description: Script which loads genomic prediction results, it computes the best method among GBLUP and LASSO and explores factors impacting predictive ability (Figure 3 and Figure S7).
DOI: 10.15468/dl.n6efpf
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Oman",
 "TaxonKey is Leucaena leucocephala (Lam.) de Wit"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043383-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/rbcj99
title: martell_genpred_ValidSet_GBLUP_LASSO_drg.Rmd

description: Script which loads predicted genotypic values and deregresses it with the best method for all traits and the validation set.
DOI: 10.15468/dl.cvk3dy
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Guilandina sphaerosperma (Urb. & Ekman) Britton"
 ]
}

 The dataset includes 23 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121837-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/81nyxk
title: genpred_CV_all_genos.Rmd

description: Script which implements genomic prediction for the training population by cross-validation for all traits, with LASSO and GBLUP methods for Martell population.
DOI: 10.57745/j9i35x
title: martell_markers_genedose_formated_checked_2removed.tab

description: Table of genomic data for genomic prediction for training and validation populations, after the exclusion of outlying genotypes, for Martell population. It was generated by martell_study_genetic_struct.Rmd script.
DOI: 10.15468/dl.bd7c3a
title: Occurrence Download

description: A dataset containing 5876 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arabis soyeri Reut. & A.Huet."
 ]
}

 The dataset includes 5876 records from 137 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041599-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j4c6me
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hydnora esculenta Jum. & H.Perrier"
 ]
}

 The dataset includes 21 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0249584-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/gcraj2
title: df_deregressed_blups_null_model_checked_3removed.tab

description: Table of deregressed BLUPs data for genomic prediction, after the exclusion of one outlying genotype for Martell population. It was generated by martell_study_genetic_struct.Rmd script.
DOI: 10.57745/mivddc
title: martell_selection_index_drg_predicted.Rmd

description: Script which loads deregressed predicted genotypic values and selects the best individuals based on a selection index For the Martell population. It generates Figures 4, S10, and Tables S8, S9, and S11.
DOI: 10.57745/xspmfz
title: 0_Readme.html

description: :unav
DOI: 10.15468/dl.xv3c89
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Vascular Plant Herbarium, Oslo (O) UiO",
 "CatalogNumber is one of (100, 101)"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0276415-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/jzvcqg
title: 0_Readme.md

description: :unav
DOI: 10.57745/yax48z
title: martell_genpred_across-pop_all_genos_models.Rmd

description: Script for applying genomic prediction in across-population for the different combinations (half-diallel and /or diversity panel to Martell). It generates the Figure 5.
DOI: 10.57745/pqtfga
title: martell_study_genrel_across-pop.Rmd

description: In this script, we load genomic data from Martell, half-diallel and panel populations and we plot genetic relatedness between genotypes for Figure S7
DOI: 10.15468/dl.fmwp3e
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Guatemala",
 "DatasetKey is Bryophyte collection of the United Herbaria of the University and ETH Zurich (Z+ZT)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0249547-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/wzhovf
title: extract_geno-values_BLUPs_edgarr_null_model.Rmd

description: Script for extracting genotypic values for all traits and deregressing BLUPs for the EDGARR population. It generates Table S4.
DOI: 10.57745/xvx4bm
title: edgarr_study_genrel_across-pop.Rmd

description: Scripts for studying the genetic relatedness between training and validation set in across-population. It generates the Figure S7.
DOI: 10.15468/dl.3c3fhf
title: Occurrence Download

description: A dataset containing 136 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Litchi chinensis Sonn."
 ]
}

 The dataset includes 136 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000073-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/btff7o
title: 0_Readme.md

description: :unav
DOI: 10.57745/hydodq
title: 0_Readme.html

description: :unav
DOI: 10.57745/v1kyak
title: genpred_across-pop_all_genos_models.Rmd

description: Scripts for applying genomic prediction in across-population for the different combinations (half-diallel and /or diversity panel to EDGARR). It generates the Figure 5 and Figure S6.
DOI: 10.15468/dl.srk557
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paromola rathbuni Porter, 1908"
 ]
}

 The dataset includes 13 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000086-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eb3a4x
title: Occurrence Download

description: A dataset containing 4831 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lathyrus pannonicus (Jacq.) Garcke"
 ]
}

 The dataset includes 4831 records from 213 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004534-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.js9bzp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helianthus annuus",
 "HasCoordinate is true",
 "Country is Netherlands"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0235796-230224095556074/datasets/export for details.
DOI: 10.15468/dl.bqx5vd
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-95.50578 17.20552,-89.64972 17.20552,-89.64972 19.54927,-95.50578 19.54927,-95.50578 17.20552))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Orbicella annularis (Ellis & Solander, 1786)",
 "Year 2000-2023"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0260048-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.995pap
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hydnophytum ramispinum Merr. & L.M.Perry"
 ]
}

 The dataset includes 15 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0249558-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.82t6at
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helianthus annuus",
 "HasCoordinate is true",
 "Country is Netherlands",
 {
 "or" : [
 "Year is less than or equal to 2022",
 "Year is 2023"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0235789-230224095556074/datasets/export for details.
DOI: 10.5281/zenodo.11081517
title: Universal Rapid Weather Prediction Model (Sonagi Model) Forecast Result

description: Universal Rapid Weather Prediction Model (Sonagi Model) Forecast Result / 30 Days / Created By Jihyeon Yoon(somehowme@gmail.com, flyingtext@nate.com, flyingtext@hotmail.com)

Latest prediction can be available on map at https://sonagi-weather.web.app

Prediction is based on the observation data of
 - Korea Meteorological Administration API

 - United States National Weather Service API
 - Canada MSC GeoMet API
DOI: 10.5281/zenodo.11081518
title: Universal Rapid Weather Prediction Model (Sonagi Model) Forecast Result

description: Universal Rapid Weather Prediction Model (Sonagi Model) Forecast Result / 30 Days / Created By Jihyeon Yoon(somehowme@gmail.com, flyingtext@nate.com, flyingtext@hotmail.com)

Latest prediction can be available on map at https://sonagi-weather.web.app

Prediction is based on the observation data of
 - Korea Meteorological Administration API

 - United States National Weather Service API
 - Canada MSC GeoMet API
DOI: 10.15468/dl.xhmct8
title: Occurrence Download

description: A dataset listing the 3821698 species recorded in GBIF matching the query:
{ }

 The dataset's 3821698 records were derived from 55172 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041540-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mv4mvq
title: Occurrence Download

description: A dataset containing 7735 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kali tragus (L.) Scop."
 ]
}

 The dataset includes 7735 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008057-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4bnbz0
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nierembergia riograndensis Hunz. & A.A.Cocucci"
 ]
}

 The dataset includes 60 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008057-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dknk8t
title: Occurrence Download

description: A dataset containing 9756 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acalypha diversifolia Jacq."
 ]
}

 The dataset includes 9756 records from 282 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033062-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sm9tdn
title: Occurrence Download

description: A dataset listing the 34 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Peru",
 "OccurrenceStatus is Present",
 "TaxonKey is Sobralia Ruiz & Pav."
 ]
}

 The dataset's 34 records were derived from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042828-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5nr727
title: Occurrence Download

description: A dataset containing 1470 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "OccurrenceStatus is Present",
 "TaxonKey is Luma A.Gray"
 ]
}

 The dataset includes 1470 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042826-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.