cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/52pjcxy486.1
title: Systematic Analysis of Allelic Silencing Defines the Interplay of Key Pathways in in X Chromosome Inactivation

description: The source data underlying Supplementary Figs.1a, 2b, 3a, 4c,g and 5c-e
DOI: 10.17632/tp3xjj9x48.1
title: Geomorphology of alpine marble caves and karst in the Fagaras Mountains, Romania

description: This dataset contains orientation and morphometry data of structural features and marble karst landforms from an alpine setting in the South Carpathians, Romania. Orientation data was processed using ArcGIS software package and Grapher for structural analysis of joints, faults, and cave passages. Morphometric data of alpine solution and collapse dolines was retrieved from the high-resolution digital surface model of the Museteica glacial cirque.
DOI: 10.5281/zenodo.3209658
title: Results of user research project to understand data curation practices

description: Supporting scalable curation is a part of the mission of the Elixir Data Platform.Thus far, we have established infrastructure capable of ingesting and aggregating text-mined outputs from multiple providers and making these available via an API. This public API is used by Europe PMC to display specific entities and relationships on full text articles (via the SciLite application). To ensure that the future development of this infrastructure meets the needs of curators, we first carried out user research to understand and identify common workflow patterns and practices via an observational study. Building on these outcomes, we then devised a curator community survey to more specifically understand which entity types, sections of a paper and tools are of top priority to address. The results of the project is presented here.
DOI: 10.5281/zenodo.3209659
title: Results of user research project to understand data curation practices

description: Supporting scalable curation is a part of the mission of the Elixir Data Platform.Thus far, we have established infrastructure capable of ingesting and aggregating text-mined outputs from multiple providers and making these available via an API. This public API is used by Europe PMC to display specific entities and relationships on full text articles (via the SciLite application). To ensure that the future development of this infrastructure meets the needs of curators, we first carried out user research to understand and identify common workflow patterns and practices via an observational study. Building on these outcomes, we then devised a curator community survey to more specifically understand which entity types, sections of a paper and tools are of top priority to address. The results of the project is presented here.
DOI: 10.17632/7hm73vk33r.1
title: A heat transfer dataset for supercritical carbon dioxide flowing in three directly heated tubes with internal diameters equal to 4.6, 8.0 and 22.0 mm under closely incremented and widely ranging operating conditions

description: All experimental results were collected in the multi-fluid Supercritical University of Ottawa Loop (SCUOL). This facility was designed to operate at a maximum pressure of 10 MPa and contained carbon dioxide as the working fluid. Measurements were collected in three electrically heated circular tubes with inner diameters D = 4.6, 8.0 and 22.0 mm, wall thicknesses 0.89, 1.00, and 1.50 mm and heated lengths of 1200, 1940 and 2000 mm, respectively; each heated test section was preceded by an unheated section of the same tube. Wall temperature was measured by closely spaced, surface mounted, T-type thermocouples. The bulk fluid specific enthalpy along the heated test section was calculated using the energy equation. Local values of the carbon dioxide thermophysical properties were computed from specified values of pressure and temperature using the NIST software. The three datasets, one for each test section, include wall temperature, bulk temperature, and heat transfer coefficient profiles for each condition measured. The conditions include a reduced pressure that was 1.13 times the pressure of supercritical carbon dioxide. The mass flux (G) was incremented by increments of 100 kg/m^2s up to G = 700 kg/m^2s, with measurements also taken at G = 1000 and 1500 kg/m^2s for the 4.6 and 8 mm test sections. For each G, measurements were taken for three or four different wall heat fluxes (q) at levels slightly below and above the corresponding value at heat transfer deterioration onset. For each of the mass flux and heat flux combinations, tests were performed for inlet temperatures in the range 0 ◦C
DOI: 10.7281/t1/ljzqpi/guf3m5
title: README.txt

description: This file lists the steps to run the .Rmd file and dependencies to install in order to run it.
DOI: 10.7281/t1/ljzqpi/uvjnrs
title: MOLST project.zip

description: Contains a .Rmd (markdown file) that produces both the final manuscript, the statistical analysis and figures, a .csv file containing a de-identified version of the study data, a .pdf codebook, and a .pdf copy of the final manuscript.
DOI: 10.17632/fvdh6pwb7b.1
title: Short pulse and compact diode pumped passively Q-Switched Nd: YLF laser at 523nm

description: Data 1 shows the output pulse width and the repetition rate versus continuous wave(CW) pump power at 523nm, they were measured by Thorlabs DET02AFC detector and Oscilloscope. Data 2 shows the output energy versus CW pump power at 523nm, which equals output power divided by repetition rate. With 5W pump power, 67μJ pulse energy with 2ns pulse width and 1.33KHz repetition rate 523nm laser was obtained. Figure 1 is the beam quality testing result which shows that the 523nm laser is operating in TEM00 mode, it was measured by Thorlabs BP209-VIS Beam quality analyzer. Figure 2 shows 2ns pulse width at 5W pump power , the pulse was measured by a Thorlab DET02AFC detector and Oscilloscope. This laser can be ideal radiation sources for Lidar and Ultraviolet light.
DOI: 10.17632/n9sk8nskfh.2
title: Test again

description: test again
DOI: 10.17632/43jwk79y6x.1
title: The relationship between spiritual transcendence, personal religiosity and mental health in Roman Catholic clergy and nuns

description: This study investigated the mental health, religiousness, and spiritual transcendence of clergy and nuns. The aim of the research was to compare religious people with regard to gender and type of ministration, and also to examine the mechanism of how spiritual transcendence and religiousness contribute to mental health. The cross-sectional study sample consisted of 140 Roman Catholic clergymen and nuns, in four groups (n = 35 for each sample): diocesan priest, religious order priests, convent nuns, and monastery nuns. Self-report questionnaires were used in the study to assess religiosity (Personal religiousness Scale, PRS), spirituality (Spiritual Transcendence Scale, STS) and both somatic and mental health (General Health Questionnaire, GHQ-28). Of the participants, 26% (n = 36) reported mental health disorder symptoms, including somatic symptoms (31%), anxiety and insomnia (27%), social dysfunction (19%), and severe depression (10%). No significant differences between groups were found in mental health and the STS, except the Transcendence Proper subscale (with higher scores belonging to those whose ministration was mostly inside the congregation). Priests scored significantly higher than nuns in the PRS and the Morality subscale. The total PRS, Faith, Religious Practices, and Religious Self, completely mediated the relationship between spiritual transcendence and mental health.
DOI: 10.17632/7ydmm6rg72.1
title: HEI's Image

description: the data was collected from the international students studying in Malaysia to measure the Higher Education Institutions Image. items were used to measure the image of HEI's focused on subjects offered, reputation of the university, involvement in social and environmental activities, available facilities for the students, tuition fees etc. students were asked to express their level of agreement based on 7 point Likert scale. international students from different parts of the world irrespective to their field of study participated in the survey. structured questionnaire were used.
DOI: 10.5525/gla.researchdata.822
title: Genome-wide association summary statistics for a genome-wide association study of multisite chronic pain
DOI: 10.17632/swzc36h56h.1
title: Clinical and pathological data of a case of primary clear cell carcinoma of nasal cavity

description: Rhinoscopy revealed that there were neoplasms in the front of the right nasal cavity, and they grew backwards to obstruct the right nasal cavity. The patient was further assessed via a contrast enhanced computed tomographic scan of the nose and paranasal sinuses, revealing an intensely enhancing heterogeneous mass involving the right nasal cavity extending up to the posterior choana. Bone discontinuities and destruction were evident in the area of the right maxillary sinus. The patient did not report any previous tumors. To determine whether the observed tumor was a metastatic lesion arising from a case of primary renal cell carcinoma, the patient was examined via abdominal CT with dynamic contrast. This examination did not reveal any evidence of lesions within the kidneys, and further assessment via abdominal ultrasound similarly failed to detect any evidence of tumors within the liver, gallbladder, spleen, pancreas, kidney, or bladder. Pathological examination of the tumor tissue was next performed, with hematoxylin and eosin (H&E) tissue samples revealing tumor cells beneath the mucosal epithelium in nests of polygonal and rounded cells that did not appear glandular in nature. The shape of the tumor cells was relatively uniform, with a large clear or foam-like cytoplasm. There were additional fibrous structures between these tumor cells. Cells had small nuclei located in various positions throughout the cell, and only a few cells exhibited an eosinophilic cytoplasm. There was no evidence of significant necrosis or mitosis. Immunohistochemical staining revealed the tumor to be CK and CK7 positive, and PSA, CEA, PAX-8, P63, GPC-3, vimentin , TTF-1, and arginase-1 negative. Criteria which must be taken into account when diagnosing primary HCCC of the nasal cavity include tumor cell morphology, immunohistochemical staining, and clinical examinations to rule out the possibility of the tumor being a metastatic lesion secondary to a primary tumor. Such HCCC tumors can often manifest in the kidneys, lungs, thyroid, or other organs. Renal cell carcinoma (RCC) tissues most often present with tumor cells exhibiting clear cytoplasm, a distinct membrane around the cytoplasm, and pleomorphic nuclei. These RCC cells are also usually CK7 and CK negative, as well as vimentin and PAX-8 positive. As such, the immunohistochemical staining in the present case, together with a negative abdominal CT examination, enables us to favor a diagnosis of primary HCCC of the nasal cavity rather than metastatic RCC. Consistent with this, no evidence of RCC has manifested during the patient follow up period. Tumor cells in this patient stained negative for P63, Arginase-1, GCP-3, TTF-1, CEA, and PSA, and there was no evidence of any tumors in the abdomen or pelvis upon abdominal ultrasound examination. In light of all of this evidence, we were able to finally diagnose this patient as suffering from primary HCCC of the right nasal cavity.
DOI: 10.25345/c5134c
title: MassIVE MSV000083841 - Improved prediction of endogenously presented HLA class I epitopes in human tumors based on 95 mono-allelic peptidomes
title: Sarkizova S, Klaeger S, Le PM, Li LW, Oliveira G, Keshishian H, Hartigan CH, Zhang W, Braun DA, Ligon KL, Bachireddy P, Divito SJ, Zervantonakis IK, Rosenbluth JM, Ouspenskaia T, Stevens J, Lane WJ, Eisenhaure T, Zhang GL, Clauser KR, Hacohen N, Carr SA, Wu CJ, Keskin DB. 2019. Antigen discovery is a high priority for developing cancer immunotherapies, but remains challenging because of inter-individual variation in tumor-specific antigens and rules of antigen presentation. To enable prediction of endogenous HLA-associated peptides across a large fraction of the human population, we used mass spectrometry (MS) to profile &gt;185,000 peptides eluted from 95 HLA-A, B, C and G mono-allelic cell lines. In addition to identifying canonical peptide motifs for each of these HLA alleles, we found unique and shared binding submotifs across alleles, and distinct motifs associated with different peptide lengths. Based on the full dataset of peptides and quantitative gene expression, we learned allele-and-length-specific and pan-allele-pan-length models that integrate peptide abundance, peptide processing and allele-specific binding rules. These models predicted endogenous HLA-associated ligands with a 2-fold improvement in positive predictive value compared to existing tools and correctly identified &gt;75% of HLA-bound peptides that were observed experimentally in 12 patient tumor cell lines by MS. More accurate prediction of class I epitopes will enable antigen discovery in cancer as well as infections, autoimmunity and other immune-related conditions.
DOI: 10.5519/qd.vk9edwvw
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3 records)
DOI: 10.17632/7ydmm6rg72.2
title: HEI's Image

description: The data was collected from the international students studying in Malaysia to measure the Higher Education Institutions Image. International students studying in both public and private universities in Malaysia were participated in this survey. Items were used to measure the image of HEI's focused on subjects offered, reputation of the university, involvement in social and environmental activities, available facilities for the students, tuition fees etc. Moreover, 7 items were used to measure the level of satisfaction among the students for their respective universities. The purpose is to check the hypotheses on the strength of relationship between the HEI's image and satisfaction of the international students. Students were asked to express their level of agreement based on 7 point Likert scale. international students from different parts of the world irrespective to their field of study participated in the survey. structured questionnaire were used.
DOI: 10.17632/npzh3g88j5.1
title: Depth and slope gradient of stations on which three types of surface sediments deposited on Observed by Drilling samples and TV Camrea

description: These data enclosed our manuscript entitled ‘Patterns of Surface Sediments Controlled by Slope Deformation on Seamounts’, which we have requested to consider for publication as an Original Article in Earth and Planetary Science Leters.These data formed the Figure 2 and 3 in the article. Two hundred five drilling shallow borehole samples on the four guyot slopes from The magellan seamounts. Forty-two of these are loose sediment (LS) on slopes with gradients between 0.4 and 5.5° that data shown in the file "LooseSediments(LS).CSV"; 132 are Cobalt-rich crusts(CS) on slopes of 3.5–37.3° that data shown in the file "CrustSediments(CS).CSV ", and 31 are ER on slopes of 15.1–43.7° that shown in the file "ExposedRocks(ER) .CSV". Slope gradients and depth were projected onto a scatter diagram, shown in Figure 2 Sixty one pictures were taken at the seafloor, of which six locations are shown in Figure 1c. Slope gradients and sample types are shown in Figure 3. The correlation between sediment types and slope gradients observed by TV video is consistent with the conclusion of Figure 2. Total 20 locations just as Pic3 and Pic6 show TS coverings between the slopes on which CS and LS are deposited, featuring brecciated rocks with some ferromanganese nodules and gravels. Slope at those locations have 3.8–6.0°gradient range, shown in Table4. Their data in the Excel file named "Vis1802"
DOI: 10.17632/npzh3g88j5.2
title: Depth and slope gradient of stations on which three types of surface sediments deposited on Observed by Drilling samples and TV Camrea

description: These data enclosed our manuscript entitled ‘Patterns of Surface Sediments Controlled by Slope Deformation on Seamounts’, which we have requested to consider for publication as an Original Article in Earth and Planetary Science Leters.These data formed the Figure 2 and 3 in the article. Two hundred five drilling shallow borehole samples on the four guyot slopes from The magellan seamounts. Forty-two of these are loose sediment (LS) on slopes with gradients between 0.4 and 5.5° that data shown in the file "LooseSediments(LS).CSV"; 132 are Cobalt-rich crusts(CS) on slopes of 3.5–37.3° that data shown in the file "CrustSediments(CS).CSV ", and 31 are ER on slopes of 15.1–43.7° that shown in the file "ExposedRocks(ER) .CSV". Slope gradients and depth were projected onto a scatter diagram, shown in Figure 2 Sixty one pictures were taken at the seafloor, of which six locations are shown in Figure 1c. Slope gradients and sample types are shown in Figure 3. The correlation between sediment types and slope gradients observed by TV video is consistent with the conclusion of Figure 2. Total 20 locations just as Pic3 and Pic6 show TS coverings between the slopes on which CS and LS are deposited, featuring brecciated rocks with some ferromanganese nodules and gravels. Slope at those locations have 3.8–6.0°gradient range, shown in Table4. Their data in the Excel file named "Vis1802"
DOI: 10.17632/npzh3g88j5.3
title: Depth and slope gradient of stations on which three types of surface sediments deposited on Observed by Drilling samples and TV Camrea

description: These data enclosed our manuscript entitled ‘Patterns of Surface Sediments Controlled by Slope Deformation on Seamounts’, which we have requested to consider for publication as an Original Article in Earth and Planetary Science Leters.These data formed the Figure 2 and 3 in the article. Two hundred five drilling shallow borehole samples on the four guyot slopes from The magellan seamounts. Forty-two of these are loose sediment (LS) on slopes with gradients between 0.4 and 5.5° that data shown in the file "LooseSediments(LS).CSV"; 132 are Cobalt-rich crusts(CS) on slopes of 3.5–37.3° that data shown in the file "CrustSediments(CS).CSV ", and 31 are ER on slopes of 15.1–43.7° that shown in the file "ExposedRocks(ER) .CSV". Slope gradients and depth were projected onto a scatter diagram, shown in Figure 2 Sixty one pictures were taken at the seafloor, of which six locations are shown in Figure 1c. Slope gradients and sample types are shown in Figure 3. The correlation between sediment types and slope gradients observed by TV video is consistent with the conclusion of Figure 2. Total 20 locations just as Pic3 and Pic6 show TS coverings between the slopes on which CS and LS are deposited, featuring brecciated rocks with some ferromanganese nodules and gravels. Slope at those locations have 3.8–6.0°gradient range, shown in Table4. Their data in the Excel file named "Vis1802"
DOI: 10.17632/npzh3g88j5.4
title: Depth and slope gradient of stations on which three types of surface sediments deposited on Observed by Drilling samples and TV Camrea

description: These data enclosed our manuscript entitled ‘Patterns of Surface Sediments Controlled by Slope Deformation on Seamounts’, which we have requested to consider for publication as an Original Article in Earth and Planetary Science Leters.These data formed the Figure 2 and 3 in the article. Two hundred five drilling shallow borehole samples on the four guyot slopes from The magellan seamounts. Forty-two of these are loose sediment (LS) on slopes with gradients between 0.4 and 5.5° that data shown in the file "LooseSediments(LS).CSV"; 132 are Cobalt-rich crusts(CS) on slopes of 3.5–37.3° that data shown in the file "CrustSediments(CS).CSV ", and 31 are ER on slopes of 15.1–43.7° that shown in the file "ExposedRocks(ER) .CSV". Slope gradients and depth were projected onto a scatter diagram, shown in Figure 2 Sixty one pictures were taken at the seafloor, of which six locations are shown in Figure 1c. Slope gradients and sample types are shown in Figure 3. The correlation between sediment types and slope gradients observed by TV video is consistent with the conclusion of Figure 2. Total 20 locations just as Pic3 and Pic6 show TS coverings between the slopes on which CS and LS are deposited, featuring brecciated rocks with some ferromanganese nodules and gravels. Slope at those locations have 3.8–6.0°gradient range, shown in Table4. Their data in the Excel file named "Vis1802"
DOI: 10.17632/npzh3g88j5.5
title: Depth and slope gradient of stations on which three types of surface sediments deposited on Observed by Drilling samples and TV Camrea

description: These data enclosed our manuscript entitled ‘Patterns of Surface Sediments Controlled by Slope Deformation on Seamounts’, which we have requested to consider for publication as an Original Article in Earth and Planetary Science Leters.These data formed the Figure 2 and 3 in the article. Two hundred five drilling shallow borehole samples on the four guyot slopes from The magellan seamounts. Forty-two of these are loose sediment (LS) on slopes with gradients between 0.4 and 5.5° that data shown in the file "LooseSediments(LS).CSV"; 132 are Cobalt-rich crusts(CS) on slopes of 3.5–37.3° that data shown in the file "CrustSediments(CS).CSV ", and 31 are ER on slopes of 15.1–43.7° that shown in the file "ExposedRocks(ER) .CSV". Slope gradients and depth were projected onto a scatter diagram, shown in Figure 2 Sixty one pictures were taken at the seafloor, of which six locations are shown in Figure 1c. Slope gradients and sample types are shown in Figure 3. The correlation between sediment types and slope gradients observed by TV video is consistent with the conclusion of Figure 2. Total 20 locations just as Pic3 and Pic6 show TS coverings between the slopes on which CS and LS are deposited, featuring brecciated rocks with some ferromanganese nodules and gravels. Slope at those locations have 3.8–6.0°gradient range, shown in Table4. Their data in the Excel file named "Vis1802"
DOI: 10.17632/npzh3g88j5.6
title: Depth and slope gradient of stations on which three types of surface sediments deposited on Observed by Drilling samples and TV Camrea

description: These data enclosed our manuscript entitled ‘Patterns of Surface Sediments Controlled by Slope Deformation on Seamounts’, which we have requested to consider for publication as an Original Article in Earth and Planetary Science Leters.These data formed the Figure 2 and 3 in the article. Two hundred five drilling shallow borehole samples on the four guyot slopes from The magellan seamounts. Forty-two of these are loose sediment (LS) on slopes with gradients between 0.4 and 5.5° that data shown in the file "LooseSediments(LS).CSV"; 132 are Cobalt-rich crusts(CS) on slopes of 3.5–37.3° that data shown in the file "CrustSediments(CS).CSV ", and 31 are ER on slopes of 15.1–43.7° that shown in the file "ExposedRocks(ER) .CSV". Slope gradients and depth were projected onto a scatter diagram, shown in Figure 2 Sixty one pictures were taken at the seafloor, of which six locations are shown in Figure 1c. Slope gradients and sample types are shown in Figure 3. The correlation between sediment types and slope gradients observed by TV video is consistent with the conclusion of Figure 2. Total 20 locations just as Pic3 and Pic6 show TS coverings between the slopes on which CS and LS are deposited, featuring brecciated rocks with some ferromanganese nodules and gravels. Slope at those locations have 3.8–6.0°gradient range, shown in Table4. Their data in the Excel file named "Vis1802"
DOI: 10.5255/ukda-sn-853717
title: Evidence for systematicity in infant and toddler curiosity-driven object exploration 2017-2018