cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20066711.v1
title: Data_Stadhouders_etal.xlsx

description: <strong>Myotube hypertrophy is associated with cancer-like metabolic reprogramming and limited by PHGDH</strong> <br> Muscle fiber size and oxidative metabolism are inversely related, suggesting that a glycolytic metabolism may offer a growth advantage in muscle fibers. However, the mechanisms underlying this advantage remains unknown. Nearly 100 years ago, Warburg reported that cancer cells take up more glucose to produce glycolytic intermediates for anabolic reactions such as amino acid-protein synthesis. The aim of this study was to test whether glycolysis contributes to anabolic signaling responses and hypertrophy in post-mitotic muscle cells. Skeletal muscle hypertrophy was induced in vitro by treating mouse C2C12 myotubes with IGF-1. 14C glucose was added to differentiation medium and radioactivity in isolated protein was measured. We exposed differentiated C2C12 and primary mouse myotubes, to 2-deoxyglucose (2DG) and PHGDH siRNA upon which we assessed myotube diameter and signaling pathways in-volved in the regulation of muscle fiber size. Here, we present evidence that, hypertrophying C2C12 myotubes undergo a cancer-like metabolic reprogramming. First, IGF-1-induced C2C12 myotube hypertrophy increases shunting of carbon from glucose into protein. Second, reduction of glycolysis through 2-deoxy-D-glucose (2DG) lowers C2C12 and primary myotube size 16-40%. Third, reducing the cancer metabolism-associated enzyme PHGDH decreases C2C12 and primary myotube size 25-52%, whereas PHGDH overexpression increases C2C12 myotube size ≈20%. Fourth, the muscle hypertrophy-promoting kinase AKT regulates PHGDH expression. Together these results suggest that glycolysis is important for hypertrophying C2C12 myotubes by reprograming their metabolism similar to cancer cells. <br> <br>
DOI: 10.6084/m9.figshare.20066711
title: Data_Stadhouders_etal.xlsx

description: <strong>Myotube hypertrophy is associated with cancer-like metabolic reprogramming and limited by PHGDH</strong> <br> Muscle fiber size and oxidative metabolism are inversely related, suggesting that a glycolytic metabolism may offer a growth advantage in muscle fibers. However, the mechanisms underlying this advantage remains unknown. Nearly 100 years ago, Warburg reported that cancer cells take up more glucose to produce glycolytic intermediates for anabolic reactions such as amino acid-protein synthesis. The aim of this study was to test whether glycolysis contributes to anabolic signaling responses and hypertrophy in post-mitotic muscle cells. Skeletal muscle hypertrophy was induced in vitro by treating mouse C2C12 myotubes with IGF-1. 14C glucose was added to differentiation medium and radioactivity in isolated protein was measured. We exposed differentiated C2C12 and primary mouse myotubes, to 2-deoxyglucose (2DG) and PHGDH siRNA upon which we assessed myotube diameter and signaling pathways in-volved in the regulation of muscle fiber size. Here, we present evidence that, hypertrophying C2C12 myotubes undergo a cancer-like metabolic reprogramming. First, IGF-1-induced C2C12 myotube hypertrophy increases shunting of carbon from glucose into protein. Second, reduction of glycolysis through 2-deoxy-D-glucose (2DG) lowers C2C12 and primary myotube size 16-40%. Third, reducing the cancer metabolism-associated enzyme PHGDH decreases C2C12 and primary myotube size 25-52%, whereas PHGDH overexpression increases C2C12 myotube size ≈20%. Fourth, the muscle hypertrophy-promoting kinase AKT regulates PHGDH expression. Together these results suggest that glycolysis is important for hypertrophying C2C12 myotubes by reprograming their metabolism similar to cancer cells. <br> <br>
DOI: 10.6084/m9.figshare.21626993
title: List gene on sengon chloroplast genome

description: This project contains data files results from chloroplast genome assembly using short-read and long-read sequencing technology of Sengon (<em>Falcataria moluccana</em>)
DOI: 10.6084/m9.figshare.21626951
title: Statistic of Short-read and Long-read Data of Sengon (Falcataria moluccana).docx

description: This project contains data files results from short-read and long-read sequencing technology of Sengon (<em>Falcataria moluccana</em>)
DOI: 10.6084/m9.figshare.21721028
title: Gene Howe (pink-flowered A. fragrans population) 2021 data

description: These data are from a pollinator-exclusion study conducted by Cecilia Girvin and Eric LoPresti in a pink-flowered population at the Gene Howe Wildlife Management Area in Hemphill County, Texas. In May 2021, Cecilia excluded floral visitors from visiting inflorescences during the day and/or night by covering inflorescences with drawstring bags. Four pollinator-exclusion treatments (with a random order) were alternately assigned to inflorescences: open to pollinators overnight (“N” treatment), open during the day (“D” treatment), open both night and day (“O” treatment), and open never (“C” treatment). Cecilia opened/closed bags every dawn and dusk from the day of first flower until senescence of the inflorescence (usually 4-6 days), when each inflorescence was permanently bagged. While we tagged 360 inflorescences in this population, 322 inflorescences survived on 103 plants. All collected inflorescences (~3 weeks later) were scored for pollination success by Cecilia Girvin and Sierra Jaeger, by whether each flower produced a seed or not. Individual columns in the dataset are further described in the associated R script, titled "A. fragrans pollination experiment 2021 analysis script".
DOI: 10.6084/m9.figshare.21721028.v1
title: Gene Howe (pink-flowered A. fragrans population) 2021 data

description: These data are from a pollinator-exclusion study conducted by Cecilia Girvin and Eric LoPresti in a pink-flowered population at the Gene Howe Wildlife Management Area in Hemphill County, Texas. In May 2021, Cecilia excluded floral visitors from visiting inflorescences during the day and/or night by covering inflorescences with drawstring bags. Four pollinator-exclusion treatments (with a random order) were alternately assigned to inflorescences: open to pollinators overnight (“N” treatment), open during the day (“D” treatment), open both night and day (“O” treatment), and open never (“C” treatment). Cecilia opened/closed bags every dawn and dusk from the day of first flower until senescence of the inflorescence (usually 4-6 days), when each inflorescence was permanently bagged. While we tagged 360 inflorescences in this population, 322 inflorescences survived on 103 plants. All collected inflorescences (~3 weeks later) were scored for pollination success by Cecilia Girvin and Sierra Jaeger, by whether each flower produced a seed or not. Individual columns in the dataset are further described in the associated R script, titled "A. fragrans pollination experiment 2021 analysis script".
DOI: 10.6084/m9.figshare.21534093
title: Success rate of repeated cycles of induction in labour in a UK clinical setting: A cohort study

description: This is the data of the numer of patients who were induced for labour in 3 months in Basildon University Hospital in 2021.
DOI: 10.6084/m9.figshare.21534093.v2
title: Success rate of repeated cycles of induction in labour in a UK clinical setting: A cohort study

description: This is the data of the numer of patients who were induced for labour in 3 months in Basildon University Hospital in 2021.
DOI: 10.6084/m9.figshare.21534093.v1
title: Success rate of repeated cycles of induction in labour in a UK clinical setting: A cohort study

description: This is the data of the numer of patients who were induced for labour in 3 months in Basildon University Hospital in 2021.
DOI: 10.34740/kaggle/dsv/4719524
title: OntoUML/UFO Catalog
DOI: 10.34740/kaggle/dsv/4719554
title: BBC News
DOI: 10.5281/zenodo.7435104
title: Dataset Epic Games

description: This is a dataset that contain info about games from Epic Games Store.
DOI: 10.25442/hku.21590565
title: Supporting data for “The survival strategies of the high shore limpet Lottia dorsuosa to withstand summer in Hong Kong: The interplay of physiology and behaviour”

description: These datasets contain the raw and/or compiled data that were analyzed in the thesis "The survival strategies of the high shore limpet <em>Lottia dorsuosa</em> to withstand summer in Hong Kong: The interplay of physiology and behaviour". Using these data, the population dynamics, allometry, thermal performance, physiological energetics, diet composition and local species distribution of <em>Lottia dorsuosa</em> were analyzed.
DOI: 10.25442/hku.21590565.v1
title: Supporting data for “The survival strategies of the high shore limpet Lottia dorsuosa to withstand summer in Hong Kong: The interplay of physiology and behaviour”

description: These datasets contain the raw and/or compiled data that were analyzed in the thesis "The survival strategies of the high shore limpet <em>Lottia dorsuosa</em> to withstand summer in Hong Kong: The interplay of physiology and behaviour". Using these data, the population dynamics, allometry, thermal performance, physiological energetics, diet composition and local species distribution of <em>Lottia dorsuosa</em> were analyzed.
DOI: 10.25442/hku.21591642
title: Supporting data for “Osteoblast Energy Flux Response in the Molecular Consequence of Osteogenesis Imperfecta Type V”

description: This is a complete dataset used in for my PhD thesis. My thesis is about studying the pathogenesis and trying to provide mechanistic insight of Osteogenesis Imperfecta Type V using a multiomic approach. Data was organized by the nature of experiments.
DOI: 10.25442/hku.21591642.v1
title: Supporting data for “Osteoblast Energy Flux Response in the Molecular Consequence of Osteogenesis Imperfecta Type V”

description: This is a complete dataset used in for my PhD thesis. My thesis is about studying the pathogenesis and trying to provide mechanistic insight of Osteogenesis Imperfecta Type V using a multiomic approach. Data was organized by the nature of experiments.
DOI: 10.25442/hku.21600807
title: Supporting data for "Accelerating low-carbon building in high-rise high-density cities through socio-technical systems approaches and proactive stakeholder partnerships"

description: Following items are submitted as the dataset <br> 1. The papers refered in carrying out systematic literature reviews to: A. Identify the constraints to delivering low-carbon buildings (LCBs) B. Identify Social Network Analtsis (SNA) applications and methods in the sustainable construction and built environment sectors <br> 2. Results of a questionnaire survey carried out to identify the common and significant constraints to delivering low-carbon buildings in high-rise high-density cities. <br> 3. Data related to analysing the interdependencies among the constraints to delivering LCBs through Interpretive Structural Modelling (ISM) and SNA <br> 4. Data related to analysing stakeholder engagement and collaboration in addressing the constraints to delivering LCBs through SNA
DOI: 10.25442/hku.21600807.v1
title: Supporting data for "Accelerating low-carbon building in high-rise high-density cities through socio-technical systems approaches and proactive stakeholder partnerships"

description: Following items are submitted as the dataset <br> 1. The papers refered in carrying out systematic literature reviews to: A. Identify the constraints to delivering low-carbon buildings (LCBs) B. Identify Social Network Analtsis (SNA) applications and methods in the sustainable construction and built environment sectors <br> 2. Results of a questionnaire survey carried out to identify the common and significant constraints to delivering low-carbon buildings in high-rise high-density cities. <br> 3. Data related to analysing the interdependencies among the constraints to delivering LCBs through Interpretive Structural Modelling (ISM) and SNA <br> 4. Data related to analysing stakeholder engagement and collaboration in addressing the constraints to delivering LCBs through SNA
DOI: 10.25442/hku.21616179
title: Supporting data for LUMINESCENT TWO-COORDINATE DINUCLEAR AND MONONUCLEAR COPPER(I) AND GOLD(I) COMPLEXES CONTAINING N-HETEROCYCLIC CARBENE (NHC) AND AMIDE LIGANDS: SYNTHESIS, CHARACTERISATION, PHOTOPHYSICS, PHOTOCHEMISTRY, PHOTOCATALYTIC AND MATERIAL APPLICATIONS

description: This dataset includes characterisation data (i.e., NMR, single crsytal structure, and so on) of a series of metal complexes and their supporting ligands. The electrochemical data (i.e., cyclic voltamegrams and differiential pulse voltamegrams, and so on) and photophysical data (i.e., UV-vis and emission spectra, and so on) are also included.
DOI: 10.25442/hku.21616179.v1
title: Supporting data for LUMINESCENT TWO-COORDINATE DINUCLEAR AND MONONUCLEAR COPPER(I) AND GOLD(I) COMPLEXES CONTAINING N-HETEROCYCLIC CARBENE (NHC) AND AMIDE LIGANDS: SYNTHESIS, CHARACTERISATION, PHOTOPHYSICS, PHOTOCHEMISTRY, PHOTOCATALYTIC AND MATERIAL APPLICATIONS

description: This dataset includes characterisation data (i.e., NMR, single crsytal structure, and so on) of a series of metal complexes and their supporting ligands. The electrochemical data (i.e., cyclic voltamegrams and differiential pulse voltamegrams, and so on) and photophysical data (i.e., UV-vis and emission spectra, and so on) are also included.
DOI: 10.6084/m9.figshare.21721433
title: Supplemental data 1.xlsx

description: supplemental data figure1
DOI: 10.6084/m9.figshare.21721433.v1
title: Supplemental data 1.xlsx

description: supplemental data figure1
DOI: 10.25451/flinders.21721397.v2
title: SCOPE_STOP_Hormones_data_20221214.xlsx

description: Circulating folate, B12, homocysteine, prolactin (PRL), human placental lactogen (hPL) and placental growth hormone (GH2) were measured in early gestation maternal sera taken from women with uncomplicated pregnancies prior to (SCOPE N=604) and post (STOP N=711) FA food fortification.
DOI: 10.25451/flinders.21721397
title: SCOPE_STOP_Hormones_data_20221214.xlsx

description: Circulating folate, B12, homocysteine, prolactin (PRL), human placental lactogen (hPL) and placental growth hormone (GH2) were measured in early gestation maternal sera taken from women with uncomplicated pregnancies prior to (SCOPE N=604) and post (STOP N=711) FA food fortification.
DOI: 10.25451/flinders.21721397.v1
title: SCOPE_STOP_Hormones_data_20221214.xlsx

description: Circulating folate, B12, homocysteine, prolactin (PRL), human placental lactogen (hPL) and placental growth hormone (GH2) were measured in early gestation maternal sera taken from women with uncomplicated pregnancies prior to (SCOPE N=604) and post (STOP N=711) FA food fortification.
DOI: 10.25442/hku.21617445
title: Supporting data for "The role of α-Parvin in long bone development"

description: This study focuses on the role of α-Parvin in long bone development. Conditional knockout of α-Parvin in cartilage and bones results in dwarfism and shorter long bones. The loss of α-Parvin causes multiple defects of growth plate chondrocytes. Further analyses reveal multiple contributor of the bone phenotypes. Taken together, α-Parvin is essential for long bone development.
DOI: 10.25442/hku.21617445.v1
title: Supporting data for "The role of α-Parvin in long bone development"

description: This study focuses on the role of α-Parvin in long bone development. Conditional knockout of α-Parvin in cartilage and bones results in dwarfism and shorter long bones. The loss of α-Parvin causes multiple defects of growth plate chondrocytes. Further analyses reveal multiple contributor of the bone phenotypes. Taken together, α-Parvin is essential for long bone development.
DOI: 10.34740/kaggle/dsv/4719662
title: 💥📰 Daily Breaking News Twitter Dataset
DOI: 10.25442/hku.21619410
title: Supporting data for "Understanding the principles and mechanisms undermining microbial dynamics in changing environments"

description: The folder contains datasets from my PhD thesis work. The datasets were grouped based on the thesis chapters. <br> Folder Chapter2_datasets was from chapter working on bacterial responses to nitrogen availability. <br> Folder Chapter3_datasets was from chapter working on bacterial responses to novel and challenging environmental condition (Salinity) <br> Folder Chapter4_datasets was from chapter working on temporal dynamics in the host's biochemical profile and its associated microbiome <br> Folder Chapter5_datasets was from chapter investigating the various factors shaping the different mollusc-associated microbiome. <br> <br>
DOI: 10.25442/hku.21619410.v1
title: Supporting data for "Understanding the principles and mechanisms undermining microbial dynamics in changing environments"

description: The folder contains datasets from my PhD thesis work. The datasets were grouped based on the thesis chapters. <br> Folder Chapter2_datasets was from chapter working on bacterial responses to nitrogen availability. <br> Folder Chapter3_datasets was from chapter working on bacterial responses to novel and challenging environmental condition (Salinity) <br> Folder Chapter4_datasets was from chapter working on temporal dynamics in the host's biochemical profile and its associated microbiome <br> Folder Chapter5_datasets was from chapter investigating the various factors shaping the different mollusc-associated microbiome. <br> <br>
DOI: 10.25442/hku.21621135
title: Dataset for thesis entitled The Role, Burden, and Capture of Regulatory Intermediaries: NGOs in China’s Environmental Public Interest Litigation System

description: In this thesis, various qualitative research methods were employed to explore the involvement of ENGOs in China’s environmental regulatory governance. The data are gathered by (1) conducting interviews with lawyers, ENGO staff, and volunteers; (2) documenting archived materials; and (3) conducting direct observation as a participant-as-observer. <br> I conducted a total of 49 interviews from 2016 to 2020. I also conducted content analysis of 229 archived EPIL cases (with detailed information, including the parties, outcomes, and claims) and other supporting documents. <br> Those data are included in this dataset.
DOI: 10.25442/hku.21621135.v1
title: Dataset for thesis entitled The Role, Burden, and Capture of Regulatory Intermediaries: NGOs in China’s Environmental Public Interest Litigation System

description: In this thesis, various qualitative research methods were employed to explore the involvement of ENGOs in China’s environmental regulatory governance. The data are gathered by (1) conducting interviews with lawyers, ENGO staff, and volunteers; (2) documenting archived materials; and (3) conducting direct observation as a participant-as-observer. <br> I conducted a total of 49 interviews from 2016 to 2020. I also conducted content analysis of 229 archived EPIL cases (with detailed information, including the parties, outcomes, and claims) and other supporting documents. <br> Those data are included in this dataset.
DOI: 10.25442/hku.21625118
title: Supporting data for "Incorporating Chinese and Western Traditions in Universities: A Study on Residential Colleges in Mainland China"

description: This study is about the perspectives of stakeholders and students in their activities and their rationales for three case residential colleges in mainland China. It focuses on how the participants have built their perspectives and understanding of residential colleges and the theoretical integration of the traditions. The dataset contains several files within each of which interview materials, original recording documents, and research reports by each case, Each document is named as focus group 1-N or P (principal) 1-N or C (Counselor) 1-N to indicate the category of the data. An Excel form is provided in Chinese to describe the information of my participants. Since the dataset contains some very sensitive information about participants, it is embargoed.
DOI: 10.25442/hku.21625118.v1
title: Supporting data for "Incorporating Chinese and Western Traditions in Universities: A Study on Residential Colleges in Mainland China"

description: This study is about the perspectives of stakeholders and students in their activities and their rationales for three case residential colleges in mainland China. It focuses on how the participants have built their perspectives and understanding of residential colleges and the theoretical integration of the traditions. The dataset contains several files within each of which interview materials, original recording documents, and research reports by each case, Each document is named as focus group 1-N or P (principal) 1-N or C (Counselor) 1-N to indicate the category of the data. An Excel form is provided in Chinese to describe the information of my participants. Since the dataset contains some very sensitive information about participants, it is embargoed.
DOI: 10.25442/hku.21617904
title: Supporting data for "Chloride-Induced Corrosion of Concrete-Steel Tubular Columns (CSTC): A Perspective Structure for Offshore Wind Turbines"

description: These files contain most of the raw data for the compressive strength of concrete-steel tubular columns(CSTC). It also includes electrochemical measurement data for slag-based fiber-reinforced geopolymer mortar specimens. This study is about the chloride-induced corrosion of CSTC and their residual performance.
DOI: 10.25442/hku.21617904.v1
title: Supporting data for "Chloride-Induced Corrosion of Concrete-Steel Tubular Columns (CSTC): A Perspective Structure for Offshore Wind Turbines"

description: These files contain most of the raw data for the compressive strength of concrete-steel tubular columns(CSTC). It also includes electrochemical measurement data for slag-based fiber-reinforced geopolymer mortar specimens. This study is about the chloride-induced corrosion of CSTC and their residual performance.
DOI: 10.25442/hku.21638174
title: Supporting data for “Anger Detection in Speech Data Using Machine Learning Methods”

description: This is the dataset for the MPhil Thesis "Anger Detection in Speech Data Using Machine Learning Methods". <br> The datasets are written in the R programming language. The 2 major datasets used in the thesis are included in this folder. <br> The annotated dataset are stored as RData. <br> Please refer to README.txt for more details.
DOI: 10.25442/hku.21638174.v1
title: Supporting data for “Anger Detection in Speech Data Using Machine Learning Methods”

description: This is the dataset for the MPhil Thesis "Anger Detection in Speech Data Using Machine Learning Methods". <br> The datasets are written in the R programming language. The 2 major datasets used in the thesis are included in this folder. <br> The annotated dataset are stored as RData. <br> Please refer to README.txt for more details.
DOI: 10.25442/hku.21630086
title: Supporting data for "Antifungal susceptibilities of emerging and novel filamentous fungal pathogens"

description: The thesis "Antifungal susceptibilities of emerging and novel filamentous fungal pathogens" focused on two things: (1) the molecular identification of fungal isolates to species level, and (2) antifungal susceptibility profiles of these isolates. <br> This dataset contains the raw sequencing data in fasta format and the processed sequencing results (displayed as phylogenetic trees in nwk format), as well as the antifungal susceptibility testing results of each fungal isolates in an excel.
DOI: 10.25442/hku.21630086.v1
title: Supporting data for "Antifungal susceptibilities of emerging and novel filamentous fungal pathogens"

description: The thesis "Antifungal susceptibilities of emerging and novel filamentous fungal pathogens" focused on two things: (1) the molecular identification of fungal isolates to species level, and (2) antifungal susceptibility profiles of these isolates. <br> This dataset contains the raw sequencing data in fasta format and the processed sequencing results (displayed as phylogenetic trees in nwk format), as well as the antifungal susceptibility testing results of each fungal isolates in an excel.
DOI: 10.34740/kaggle/dsv/4719713
title: 🇺🇦 Ukraine Conflict Twitter Dataset