cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.f8fk8u
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mollusca",
 "DatasetKey is CardObs : Observations naturalistes issues de l'outil CardObs-Données naturalistes de Laurent PONCET",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-25.03991 31.75, 41.65954 31.75, 41.65954 71.53037, -25.03991 71.53037, -25.03991 31.75))"
 ]
}

 The dataset includes 39 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0214895-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112018231
title: Cuneiform Tablet 1913.14.0254, Spurlock 1913.14.0254

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0254; CDLI P420636 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (10YR 8.5/1) Brownish Pink (5YR 8/3) Dark Gray to Black (N 2.5/ 4.6% R) -discoloration ❧ [Physical Object Note:] 5 x 4.7 x 2.4 cm (71g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.15468/dl.qxu5nh
title: Occurrence Download

description: A dataset containing 20859 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aratinga weddellii (Deville, 1851), Aratinga weddelli (Deville, 1851))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 20859 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011365-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112018312
title: Cuneiform Tablet 1913.14.0255, Spurlock 1913.14.0255

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0255; CDLI P420637 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Pale Yellowish Pink (5YR 8.5/1.5) Dark Gray (N 4.25/ 13.7% R) -discoloration ❧ [Physical Object Note:] 4.6 x 4.4 x 2.4 cm (58g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.15468/dl.ppa3kb
title: Occurrence Download

description: A dataset containing 16073 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ficedula westermanni (Sharpe, 1888))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 16073 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0300224-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112018311
title: Cuneiform Tablet 1913.14.0254, Spurlock 1913.14.0254

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0254; CDLI P420636 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (10YR 8.5/1) Brownish Pink (5YR 8/3) Dark Gray to Black (N 2.5/ 4.6% R) -discoloration ❧ [Physical Object Note:] 5 x 4.7 x 2.4 cm (71g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.15468/dl.ga9chp
title: Occurrence Download

description: A dataset containing 1084 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pyrrhura cruentata (Wied-Neuwied, 1820))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1084 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011383-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.35qxcf
title: Occurrence Download

description: A dataset containing 67881 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Castor canadensis Kuhl, 1820"
 ]
}

 The dataset includes 67881 records from 173 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0214902-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112017998
title: Cuneiform Tablet 1913.14.0254, Spurlock 1913.14.0254

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0254; CDLI P420636 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (10YR 8.5/1) Brownish Pink (5YR 8/3) Dark Gray to Black (N 2.5/ 4.6% R) -discoloration ❧ [Physical Object Note:] 5 x 4.7 x 2.4 cm (71g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.15468/dl.5pqmqb
title: Occurrence Download

description: A dataset containing 2043 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Desmodium triflorum (L.) DC.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2043 records from 157 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008049-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.an7fk5
title: Occurrence Download

description: A dataset containing 3742 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Indonesia, Malaysia, Papua New Guinea, Philippines, Singapore, Brunei Darussalam, Timor-Leste)",
 "OccurrenceStatus is Present",
 "TaxonKey is Castanopsis (D.Don) Spach"
 ]
}

 The dataset includes 3742 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0300180-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112018286
title: Cuneiform Tablet 1913.14.0254, Spurlock 1913.14.0254

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0254; CDLI P420636 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (10YR 8.5/1) Brownish Pink (5YR 8/3) Dark Gray to Black (N 2.5/ 4.6% R) -discoloration ❧ [Physical Object Note:] 5 x 4.7 x 2.4 cm (71g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.15468/dl.wbwm5x
title: Occurrence Download

description: A dataset containing 46987 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acanthoscelides obtectus (Say, 1831), Bactrocera tsuneonis (Miyake, 1919), Callosobruchus maculatus (Fabricius, 1775), Cydia pomonella (Linnaeus, 1758), Daktulosphaira vitifoliae (Fitch, 1855), Leptinotarsa decemlineata (Say, 1824), Lissorhoptrus oryzophilus Kuschel, 1952, Solenopsis invicta Buren, 1972, Phenacoccus solenopsis Tinsley, 1898)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Human Observation, Observation, Literature Occurrence)"
 ]
}

 The dataset includes 46987 records from 251 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011413-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112043331
title: Cuneiform Tablet 1913.14.0010, Spurlock 1913.14.0010

description: [Text Description:] Administrative tablet ❧ [Text or Publication Number Note:] Spurlock 1913.14.0010; CDLI P420390 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Pale Orange Yellow (10YR 8/2.5) ❧ [Physical Object Note:] 4.3 x 4.3 x 1.8 cm (42g) ❧ [Physical Object Note:] Seal impressions
DOI: 10.15468/dl.phdfxc
title: Occurrence Download

description: A dataset containing 208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Enneapogon persicus Boiss.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 208 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008067-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3y5r2w
title: Occurrence Download

description: A dataset containing 589268 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Material sample, Material citation, Specimen, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Poa pratensis L."
 ]
}

 The dataset includes 589268 records from 1624 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011419-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29589821
title: Exploring the antibiofilm effect of nitrofurantoin and rutin in uropathogenic <i>Klebsiella pneumoniae</i>

description: Biofilm formation is a critical factor in uropathogenic <i>Klebsiella pneumoniae</i>, enabling colonization in the urinary tract and contributing to biofilm-mediated antibiotic resistance. This study evaluates the anti-biofilm and antimicrobial properties of the nitrofurantoin-rutin (Ntf-Rut) combination against a strong biofilm-forming clinical isolate, <i>K. pneumoniae</i> SLMK002, screened from <i>Klebsiella</i> spp. (<i>n</i> = 15) causing urinary tract infections (UTI). The findings showed Ntf–Rut combination significantly inhibited biofilm mass by 81%, with a 74% reduction in extracellular polymeric substances (EPS). Colony Forming Unit (CFU) enumeration analysis revealed higher cell death in mature biofilm, with CFU reduced from 9 ± 1 × 10<sup>6</sup> to 2 ± 1 × 10<sup>6</sup>. Further, flow cytometry results prove that the combination induces cell membrane damage. In conclusion, the findings depict that the Ntf-Rut combination effectively reduces and inhibits the biofilm of <i>K. pneumoniae</i> SLMK002.
DOI: 10.6084/m9.figshare.29589821.v1
title: Exploring the antibiofilm effect of nitrofurantoin and rutin in uropathogenic <i>Klebsiella pneumoniae</i>

description: Biofilm formation is a critical factor in uropathogenic <i>Klebsiella pneumoniae</i>, enabling colonization in the urinary tract and contributing to biofilm-mediated antibiotic resistance. This study evaluates the anti-biofilm and antimicrobial properties of the nitrofurantoin-rutin (Ntf-Rut) combination against a strong biofilm-forming clinical isolate, <i>K. pneumoniae</i> SLMK002, screened from <i>Klebsiella</i> spp. (<i>n</i> = 15) causing urinary tract infections (UTI). The findings showed Ntf–Rut combination significantly inhibited biofilm mass by 81%, with a 74% reduction in extracellular polymeric substances (EPS). Colony Forming Unit (CFU) enumeration analysis revealed higher cell death in mature biofilm, with CFU reduced from 9 ± 1 × 10<sup>6</sup> to 2 ± 1 × 10<sup>6</sup>. Further, flow cytometry results prove that the combination induces cell membrane damage. In conclusion, the findings depict that the Ntf-Rut combination effectively reduces and inhibits the biofilm of <i>K. pneumoniae</i> SLMK002.
DOI: 10.6084/m9.figshare.29380778
title: The role of oral microbiota and tooth loss in cardiovascular disease risk: a systematic review

description: This systematic review explores the relationship between the oral microbiome in edentulous patients and cardiovascular diseases (CVD). A search was conducted across databases PubMed, Scopus, Web of Science, Embase, and gray literature sources. The review followed PRISMA and AMSTAR guidelines. After removing duplicates, the articles were evaluated by titles and abstracts, and 21 were selected for full-text review, with 9 ultimately included in the final analysis. Oral dysbiosis, linked to systemic conditions like obesity, diabetes, and CVD, is common in inflammatory oral diseases such as periodontitis and denture stomatitis, disrupting original oral microbiota. This imbalance may lead to transient bacteremia and systemic inflammation, contributing to CVD development. Tooth loss reduces salivary microbiome diversity, and denture use in CVD patients is linked to decreased life expectancy compared to dentate individuals. The findings suggest tooth loss, denture use, and oral microbiota dysbiosis are unconventional risk factors for CVD progression.
DOI: 10.6084/m9.figshare.29380778.v1
title: The role of oral microbiota and tooth loss in cardiovascular disease risk: a systematic review

description: This systematic review explores the relationship between the oral microbiome in edentulous patients and cardiovascular diseases (CVD). A search was conducted across databases PubMed, Scopus, Web of Science, Embase, and gray literature sources. The review followed PRISMA and AMSTAR guidelines. After removing duplicates, the articles were evaluated by titles and abstracts, and 21 were selected for full-text review, with 9 ultimately included in the final analysis. Oral dysbiosis, linked to systemic conditions like obesity, diabetes, and CVD, is common in inflammatory oral diseases such as periodontitis and denture stomatitis, disrupting original oral microbiota. This imbalance may lead to transient bacteremia and systemic inflammation, contributing to CVD development. Tooth loss reduces salivary microbiome diversity, and denture use in CVD patients is linked to decreased life expectancy compared to dentate individuals. The findings suggest tooth loss, denture use, and oral microbiota dysbiosis are unconventional risk factors for CVD progression.
DOI: 10.15468/dl.2sznvv
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acacia mearnsii",
 "Country is Indonesia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 25 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031860-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.deae9q
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Juncus tenuis",
 "Country is Hungary",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031863-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7qafy6
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Juncus tenuis",
 "Country is Honduras",
 "HasCoordinate is true"
 ]
}

 The dataset includes 42 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031861-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s3gdza
title: Occurrence Download

description: A dataset containing 1990 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Xylocopa augusti"
 ]
}

 The dataset includes 1990 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031862-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ywtdxz
title: Occurrence Download

description: A dataset containing 8006 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lactuca floridana"
 ]
}

 The dataset includes 8006 records from 176 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031864-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nxzdfc
title: Occurrence Download

description: A dataset containing 268 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Xylocopa aurulenta"
 ]
}

 The dataset includes 268 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031865-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nta6pz
title: Occurrence Download

description: A dataset containing 960195 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laminariales"
 ]
}

 The dataset includes 960195 records from 675 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031840-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16344850
title: Pan-Cancer Proteogenomic Characterization of Metastatic Brain Tumors

description: Pan-Cancer Proteogenomic Characterization of Metastatic Brain Tumors
DOI: 10.15468/dl.bjetcw
title: Occurrence Download

description: A dataset containing 1065 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oxytropis arctica"
 ]
}

 The dataset includes 1065 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031867-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x7zyh7
title: Occurrence Download

description: A dataset containing 418 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Isachne mauritiana",
 "HasCoordinate is true",
 "Geometry POLYGON ((-17.66889 -35.11691, 51.34702 -35.11691, 51.34702 37.62, -17.66889 37.62, -17.66889 -35.11691))"
 ]
}

 The dataset includes 418 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031869-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.52534v
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pseudodidymella fagi",
 "Country is Slovenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 39 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031866-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rbzbxp
title: Occurrence Download

description: A dataset containing 144 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio vulgaris",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 144 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031870-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.642537
title: Occurrence Download

description: A dataset containing 169 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aedes bimaculatus"
 ]
}

 The dataset includes 169 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031871-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dvwey5
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Juncus tenuis",
 "Country is Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 56 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031874-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.muqwyt
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acacia mearnsii",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 38 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031872-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9mhyuw
title: Occurrence Download

description: A dataset containing 328 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acacia mearnsii",
 "Country is Kenya",
 "HasCoordinate is true"
 ]
}

 The dataset includes 328 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031873-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16348621
title: Supplementary files

description: 1.Tables:

Table-S1_Parental traning dataset: We compiled modern arc and non-arc basalts from the GEOROC and PetDB databases.

Table-S2_Training dataset for XGBoost modeling: The major and trace elements were extracted from the "Parental training dataset", which can be applied to train the XGBoost machine learning model.

Table-S3_Validation-Northeast China and Vanuatu: Validation dataset for the XGBoost machine learning model.

Table-S4_Alteration test-Hainan Island and eastern Jamaica: Alteration test for the XGBoost machine learning model.

Table-S5_Parental application dataset: The application dataset comprises global basalts (~0.85 Ga to the present).

Table-S6_Application dataset for prediction: We extracted major and trace elements from the "Parental application dataset", which can be predicted by the trained XGBoost model.

Table-S7_Calculated melting PT of primitive arc basalts: We calculated the meting pressure and temperature conditions of global primitive arc basalts.

Table-S8_Petrological modeling for arc mantle melts: We applied the partial melting model to eatimate the sub-arc mantle fO2 (see Methods in the main text).

Table-S9_Calculated mean V-Sc and PT of primitive arc basalts: The estimated mean V/Sc, sub-arc mantle fO2 and melting pressure and temperature conditions of primtive arc basalts since ~0.8 Ga.

Reference key from EarthChem dataset: References information for EarthChem dataset.

Reference key from KS2012 dataset: References information for KS2012 dataset (Keller and Schoene, 2012).

2.CodePlease put the Excel file and the python code in the same path. All the python codes were implemented on the Jupyter Notebook platform.

If you want to run the "Python_arc_classification ML model_ctliu2024", you can use the Excel Table-S2 and Table-S6. See details in the python file.