cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.3dmu7r
title: Occurrence Download

description: A dataset containing 109384496 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (EOD – eBird Observation Dataset, iNaturalist Research-grade Observations)",
 "GadmGid is USA.5_1"
 ]
}

 The dataset includes 109384496 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088002-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3vm8vk
title: Occurrence Download

description: A dataset containing 321631 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phoca vitulina"
 ]
}

 The dataset includes 321631 records from 429 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019888-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4xcu2a
title: Occurrence Download

description: A dataset containing 14886 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Prunus virginiana)",
 "StateProvince is one of (Alberta, Arizona, Arkansas, British Columbia, California, Colorado, Connecticut, Delaware, District of Columbia, Georgia, Idaho, Illinois, Indiana, Iowa, Kansas, Kentucky, Maine, Manitoba, Maryland, Massachusetts, Mexico Northwest, Michigan, Minnesota, Missouri, Montana, Nebraska, Nevada, New Brunswick, New Hampshire, New Mexico, New York, Newfoundland, North Carolina, North Dakota, Northwest Territories, Nova Scotia, Ohio, Oklahoma, Ontario, Oregon, Pennsylvania, Prince Edward I., Quebec, Rhode I., Saskatchewan, South Dakota, Tennessee, Texas, Utah, Vermont, Virginia, Washington, West Virginia, Wisconsin, Wyoming)",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 14886 records from 255 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019962-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17338990
title: Data of "Ventral Hippocampus Modulates Prefrontal Control of Background Contextual Fear After Cued Extinction"

description: This dataset contains data related to the following article:

Marco N Pompili, Adam Eckmier, Ralitsa Todorova, Margot Tirole, Bill P Godsil, Thérèse M Jay (2025) Ventral Hippocampus Modulates Prefrontal Control of Background Contextual Fear After Cued Extinction. European Journal of Neuroscience
DOI: 10.5281/zenodo.17338991
title: Data of "Ventral Hippocampus Modulates Prefrontal Control of Background Contextual Fear After Cued Extinction"

description: This dataset contains data related to the following article:

Marco N Pompili, Adam Eckmier, Ralitsa Todorova, Margot Tirole, Bill P Godsil, Thérèse M Jay (2025) Ventral Hippocampus Modulates Prefrontal Control of Background Contextual Fear After Cued Extinction. European Journal of Neuroscience
DOI: 10.15468/dl.baruzq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Apterygiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((140 70,150 70,150 80,140 80,140 70))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019963-251009101135966/datasets/export for details.
DOI: 10.5286/isis.e.rb2590251-1
title: Sample screening on Linarite crystals
DOI: 10.15468/dl.shp653
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Scaphopoda)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((160 30,170 30,170 40,160 40,160 30))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019965-251009101135966/datasets/export for details.
DOI: 10.15468/dl.wybj5b
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Apterygiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((130 70,140 70,140 80,130 80,130 70))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019964-251009101135966/datasets/export for details.
DOI: 10.15468/dl.ggk8jv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tinamiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((120 30,130 30,130 40,120 40,120 30))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019967-251009101135966/datasets/export for details.
DOI: 10.21227/apcz-4v64
title: "Recon-Transformer Dataset: Training Projection Images, Real Masked Images, and Pre-trained .pt Model for CT Backprojection Recon"

description: "Recon-Transformer Dataset: Training Projection Images, Real Masked Images, and Pre-trained .pt Model for CT Backprojection Reconstruction"
DOI: 10.60521/332472
title: Reprocessed MCS prestack time-migrated data (SEG-Y format), South Atlantic CREST transect survey (MGL1601)

description: This data set presents reprocessed multi-channel seismic (MCS) reflection profiles from the 2016 CREST seismic survey. The processing workflow is described in detail in Estep et al. 2019 https://doi.org/10.1029/2019JB017302. Revised velocities and mutes were selected to improve the original images. The data files are in SEG-Y format. The data files were generated as part of projects called Evolution of South Atlantic Oceanic Crust: A Seismic Transect; and, CREST: Crustal Reflectivity Experiment Southern Transect. Funding was provided by NSF awards OCE15-37108 and OCE15-37169.
DOI: 10.60521/332473
title: Seismic navigation files for reprocessed MCS prestack time-migrated data, South Atlantic CREST transect survey (MGL1601)

description: This data set presents navigation files for reprocessed multi-channel seismic (MCS) reflection profiles from the 2016 CREST seismic survey. The files are in ASCII text format with 3 columns: CDP number, CDP latitude, CDP longitude. The data files were generated as part of projects called Evolution of South Atlantic Oceanic Crust: A Seismic Transect; and, CREST: Crustal Reflectivity Experiment Southern Transect. Funding was provided by NSF awards OCE15-37108 and OCE15-37169.
DOI: 10.60521/332475
title: P-wave velocity models (netCDF format), South Atlantic CREST transect survey (MGL1601)

description: The seismic P-wave velocity grids presented here are in GMT-compatible netCDF format. Detailed modeling procedures are given in Christeson et al. (2025). The netCDF grid parameters are as follows: the x-coordinate is profile distance in km (grid interval 0.05 km), the y-coordinate is depth in km (grid interval 0.025 km), and the z-values are P-wave velocities in km/s. The data files were generated as part of projects called Evolution of South Atlantic Oceanic Crust: A Seismic Transect; and, CREST: Crustal Reflectivity Experiment Southern Transect. Funding was provided by NSF awards OCE15-37108 and OCE15-37169.
DOI: 10.5281/zenodo.17186104
title: MD simulations of poly(lactic acid) chains of various molecular weights in melt

description: Molecular Dynamics (MD) Simulations of poly(lactic acid) (PLA) and its stereoisomers with different molecular weights in melt. The preparation of the systems is described elsewhere [1].

The dataset contains the production run for each system. The label PLLA denotes a system with only L-type of monomers, the label PDLA denotes a system with only D-type of monomers and the label copo100 is used for compolymer systems with 100 monomers per chain of both types. The percentage of D monomer in each copolymer is indicated in the label (55% and 16%). The production runs were performed at constant temperature of 500K and constant pressure of 1 atm. 

All files are in Gromacs format. The used force field parameters are summarized in PLAFF3.itp file in each directory.  The force field was based on ref[2] and it was modified to be able to simulate copolymer structures. Namely, the tabulated potential for the backbone dihedrals was replaced by the Ryckaert-Bellemans function, which has the same parameters for both types of monomers. In addition, a new atom type was created for the D-type of monomer, to be able to properly distinguish CMAP parameters for each type of monomer.

[1] Bačová, P; Harmandaris, V.; Molina,  S. I.; Macromolecules 2025 58 (16), 8572-8580, https://pubs.acs.org/doi/10.1021/acs.macromol.5c00918

[2] McAliley, J. H.; Bruce, D. A. Development of Force Field Parameters for Molecular Simulation of Polylactide. Journal of Chemical Theory and Computation 2011, 7, 3756–3767, DOI: 10.1021/ct200251x
DOI: 10.5281/zenodo.17186105
title: MD simulations of poly(lactic acid) chains of various molecular weights in melt

description: Molecular Dynamics (MD) Simulations of poly(lactic acid) (PLA) and its stereoisomers with different molecular weights in melt. The preparation of the systems is described elsewhere [1].

The dataset contains the production run for each system. The label PLLA denotes a system with only L-type of monomers, the label PDLA denotes a system with only D-type of monomers and the label copo100 is used for compolymer systems with 100 monomers per chain of both types. The percentage of D monomer in each copolymer is indicated in the label (55% and 16%). The production runs were performed at constant temperature of 500K and constant pressure of 1 atm. 

All files are in Gromacs format. The used force field parameters are summarized in PLAFF3.itp file in each directory.  The force field was based on ref[2] and it was modified to be able to simulate copolymer structures. Namely, the tabulated potential for the backbone dihedrals was replaced by the Ryckaert-Bellemans function, which has the same parameters for both types of monomers. In addition, a new atom type was created for the D-type of monomer, to be able to properly distinguish CMAP parameters for each type of monomer.

[1] Bačová, P; Harmandaris, V.; Molina,  S. I.; Macromolecules 2025 58 (16), 8572-8580, https://pubs.acs.org/doi/10.1021/acs.macromol.5c00918

[2] McAliley, J. H.; Bruce, D. A. Development of Force Field Parameters for Molecular Simulation of Polylactide. Journal of Chemical Theory and Computation 2011, 7, 3756–3767, DOI: 10.1021/ct200251x
DOI: 10.60521/332476
title: Navigation files for P-wave velocity models, South Atlantic CREST transect survey (MGL1601)

description: The velocity model navigation files are in ASCII format and relate the model distance to (latitude, longitude) coordinates. The files contain three columns: Model distance (km); Latitude (degrees); Longitude (degrees). Detailed modeling procedures are given in Christeson et al. (2025). The data files were generated as part of projects called Evolution of South Atlantic Oceanic Crust: A Seismic Transect; and, CREST: Crustal Reflectivity Experiment Southern Transect. Funding was provided by NSF awards OCE15-37108 and OCE15-37169.
DOI: 10.15468/dl.my799p
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acacia adunca",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019968-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17352183
title: Perfil dos estudantes do curso de Física da Universidade Federal de Santa Maria
DOI: 10.5281/zenodo.17352182
title: Perfil dos estudantes do curso de Física da Universidade Federal de Santa Maria
DOI: 10.15468/dl.39a9v5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tinamiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((130 30,140 30,140 40,130 40,130 30))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019969-251009101135966/datasets/export for details.
DOI: 10.15468/dl.bnke4f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tinamiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((140 30,150 30,150 40,140 40,140 30))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019970-251009101135966/datasets/export for details.
DOI: 10.60723/13098
title: Multiexon SOX5 Deletion in a Male with Lamb-Shaffer Syndrome 

description: We report a 13-year-old male presenting with autism spectrum disorder level 3, moderate intellectual disability, severe language impairment, hypotonia, and facial dysmorphism. Additional features included clumsy gait, constipation, joint laxity, strabismus, myopia, nystagmus, obstructive sleep apnoea, and mild pectus excavatum. Genetic testing identified a heterozygous 131 kb deletion of SOX5 spanning exons 7–15 of the canonical transcript (15 exons total). The deletion was not detected on a 60K microarray due to limited probe coverage but was confirmed by orthogonal sequencing methods. Loss-of-function variants in SOX5 are associated with Lamb-Shaffer syndrome, characterised by developmental delay, language impairment, hypotonia, dysmorphic features, and autism. The original Lamb and Shaffer report described two patients with multi-exon SOX5 deletions involving exons 8–15 and 9–15, similar in size to this case. More recent reports have focused on intragenic loss-of-function variants, with few additional multi-exon deletions affecting the terminal exon. This case highlights the phenotypic overlap with Lamb-Shaffer syndrome and underscores the limitations of lower-resolution arrays for detecting sub-200 kb intragenic deletions. It also expands the spectrum of pathogenic SOX5 deletions, providing further evidence for their role in neurodevelopmental disorders.
DOI: 10.15468/dl.kutauc
title: Occurrence Download

description: A dataset containing 26187 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Acer saccharum"
 ]
 },
 "HasCoordinate is TRUE",
 "Year is greater than or equal to 2010",
 "Year is less than or equal to 2024",
 "DecimalLatitude is greater than or equal to 27.72628235976724",
 "DecimalLatitude is less than or equal to 56.95264697098938",
 "DecimalLongitude is greater than or equal to -90.41184314974709",
 "DecimalLongitude is less than or equal to -59.60830582776985",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 26187 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019972-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ef99rv
title: Occurrence Download

description: A dataset containing 38632 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Griselinia littoralis"
 ]
}

 The dataset includes 38632 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019971-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tvg7y2
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Quercus ajoensis)",
 "StateProvince is one of (Arizona, Mexico Northwest)",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 101 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019973-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fyvcfp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Apterygiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-120 80,-110 80,-110 90,-120 90,-120 80))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019975-251009101135966/datasets/export for details.
DOI: 10.15468/dl.ccrnh5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Scaphopoda)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-80 60,-70 60,-70 70,-80 70,-80 60))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019974-251009101135966/datasets/export for details.
DOI: 10.15468/dl.yte5hy
title: Occurrence Download

description: A dataset containing 816819 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "TaxonKey is Gastropoda"
 ]
}

 The dataset includes 816819 records from 2060 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019924-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yq28c6
title: Occurrence Download

description: A dataset containing 1079 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Coenobita compressus H.Milne-Edwards, 1836"
 ]
}

 The dataset includes 1079 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010572-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69qexv
title: Occurrence Download

description: A dataset containing 4877 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pandanus Parkinson"
 ]
}

 The dataset includes 4877 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010571-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tz94jk
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003398-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t5kg2f
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004742-190307172214381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4qey4m
title: Occurrence Download

description: A dataset containing 6384 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "TaxonKey is one of (Ceroxylon quindiuense (H.Karst.) H.Wendl.)"
 ]
}

 The dataset includes 6384 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060775-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fyxco0
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008657-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6turqs
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "InstitutionCode is one of (rom, aum)",
 "TaxonKey is Crenicichla zebrina Montaña, López-Fernández & Taphorn, 2008"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051527-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nnvkin
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004795-190307172214381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.