cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.p8qaq8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dolichopteroides Parin, Belyanina & Evseenko, 2009",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((27.0623 31.9334,26.9648 31.9498,26.9648 28.8496,35.2246 28.8496,35.4082 29.442,34.5107 31.7446,34.2089 31.83,33.6449 31.6171,32.7153 31.5989,32.1134 31.9914,31.0159 32.1003,30.233 31.9935,29.1426 31.3343,27.0623 31.9334))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008474-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.29195408
title: 抗氧化peptides.xlsx

description: Ultrasound-assisted structural characterization and properties of glycosylation-modified products of the British red kidney bean protein antioxidant peptide fractions
DOI: 10.6084/m9.figshare.29195408.v1
title: 抗氧化peptides.xlsx

description: Ultrasound-assisted structural characterization and properties of glycosylation-modified products of the British red kidney bean protein antioxidant peptide fractions
DOI: 10.5281/zenodo.15552499
title: ACEM 9992 - raw data
DOI: 10.5281/zenodo.15552500
title: ACEM 9992 - raw data
DOI: 10.15468/dl.tnjpqu
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Kenya",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Luffa aegyptiaca Mill."
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008476-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fzpuzy
title: Occurrence Download

description: A dataset containing 84255 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is AM: Terrestrial Insect Collections (1896-2000)"
 ]
}

 The dataset includes 84255 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006453-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uf6uw9
title: Occurrence Download

description: A dataset containing 488809 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tringa glareola Linnaeus, 1758",
 "HasCoordinate is true",
 "Year is greater than 1989",
 "Year is less than 2026",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is Absent"
 ]
 }
 },
 "CoordinateUncertaintyInMeters is less than or equal to 1000"
 ]
}

 The dataset includes 488809 records from 300 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006454-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7uzzyy
title: Occurrence Download

description: A dataset containing 22596 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Meliosma Blume"
 ]
}

 The dataset includes 22596 records from 395 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006459-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qgvb65
title: Occurrence Download

description: A dataset containing 32007 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((118.44667 -3.81486,123.85397 -3.81486,123.85397 -0.39252,122.07435 0.14137,118.44667 -0.39252,118.44667 -3.81486))",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 32007 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006460-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15461681
title: Reproductive ecology of Jacobaea paludosa in its peripheral Southern distribution range: a self-sustainability assessment

description: The agricultural and industrial development of plain zones has pushed many hydro-hygrophilous species towards the verge of extinction, due to habitat destruction and confinement into small and isolated nuclei. This is especially evident in densely populated areas such as the Po Valley, where the disappearance of large areas of marshes and forests has led to a few surviving strips of naturalness in a highly anthropized matrix. In this context, the populations of Jacobaea paludosa are believed to worryingly be decreasing due to progressive habitat destruction and increase in water pollution and eutrophication. This dataset contains data on the reproductive ecology of a wide, apparently well-established population (PIU) in comparison with a second population which underwent reinforcement in 2006 (NOV).
DOI: 10.5281/zenodo.15461682
title: Reproductive ecology of Jacobaea paludosa in its peripheral Southern distribution range: a self-sustainability assessment

description: The agricultural and industrial development of plain zones has pushed many hydro-hygrophilous species towards the verge of extinction, due to habitat destruction and confinement into small and isolated nuclei. This is especially evident in densely populated areas such as the Po Valley, where the disappearance of large areas of marshes and forests has led to a few surviving strips of naturalness in a highly anthropized matrix. In this context, the populations of Jacobaea paludosa are believed to worryingly be decreasing due to progressive habitat destruction and increase in water pollution and eutrophication. This dataset contains data on the reproductive ecology of a wide, apparently well-established population (PIU) in comparison with a second population which underwent reinforcement in 2006 (NOV).
DOI: 10.5281/zenodo.15458834
title: Dataset and trained models for paper "MMPK: A Multimodal Deep Learning Framework to Predict Human Oral Pharmacokinetic Parameters"
DOI: 10.5281/zenodo.15461669
title: Data for the study 'Interplay of loading and adsorption controls elastic deformation of clastic and crystalline rocks'

description: Here we provide the experimental dataset for the study entitled, 'Interplay of loading and adsorption controls elastic deformation of clastic and crystalline rocks', prepared by Wu et al.

We continuously monitor the elastic deformation of a fine-grained sandstone specimen subjected to intermittent cyclic loading at increasing ambient humidity levels (20 to 95%) approaching saturated vapor over 34 days. The dataset archived here is presented in Matlab format stored in 9 RH levels (20, 30, 40, 50, 60, 70, 80, 90, 95%) and 1 reference state of oven-dry conditions. At each humid condition, mechanical deformation data is acquired via cyclic loading cycles where axial confinement is quasi-statically increased and decreased at a constant rate of 0.5 MPa/sec up to 30 MPa. The specimen is maintained at a static seating load of 1 MPa between load cycles while mechanical deformation data is also recorded.
DOI: 10.15472/vcuh3y
title: Vegetación asociada al complejo cenagoso de Beté, municipio del Medio Atrato-Chocó. 2024

description: La vegetación en las ciénagas desempeña un papel crucial en la salud y sostenibilidad de estos ecosistemas. Las ciénagas, ricas en biodiversidad, actúan como hábitats para numerosas especies de flora y fauna, mientras que la vegetación ayuda a regular el flujo de agua, controlando inundaciones y filtrando contaminantes. Además, la vegetación en las ciénagas contribuye significativamente al ciclo de nutrientes y al almacenamiento de carbono, mitigando los efectos del cambio climático. Estos beneficios ecológicos también se traducen en ventajas económicas, como la promoción del turismo ecológico, la sustentabilidad de la pesca y la agricultura local, y la obtención de productos forestales.
Sin embargo, la vegetación en las ciénagas enfrenta múltiples amenazas, incluyendo el desarrollo urbano e industrial, la contaminación, el cambio climático y la invasión de especies no nativas. Para proteger estos valiosos ecosistemas, es fundamental implementar estrategias de conservación que incluyan la protección de hábitats, la restauración ecológica y la educación y concientización de las comunidades locales. Conocer la vegetación de las ciénagas es fundamental para comprender y preservar estos ecosistemas vitales. La vegetación juega un papel crucial en mantener la biodiversidad, proporcionando hábitats para numerosas especies de flora y fauna.
Además, actúa como un filtro natural, mejorando la calidad del agua al retener sedimentos y contaminantes, y ayuda a regular el flujo de agua, previniendo inundaciones. La vegetación también es esencial en el ciclo de nutrientes y en el almacenamiento de carbono, contribuyendo significativamente a la mitigación del cambio climático. El conocimiento detallado de la vegetación en las ciénagas permite desarrollar estrategias efectivas de conservación y manejo. Este conocimiento es vital para identificar especies clave y sus roles ecológicos, así como para monitorear la salud del ecosistema y detectar cambios ambientales. Además, facilita la restauración ecológica de áreas degradadas y la implementación de políticas ambientales adecuadas. Conocer la vegetación de las ciénagas no solo protege estos ecosistemas, sino que también garantiza los beneficios económicos y sociales que proporcionan, como la pesca, la agricultura y el ecoturismo.
Debido a todo lo anterior y con el fin de continuar conociendo y documentando los ecosistemas estratégicos del área de influencia directa del Instituto de Investigaciones Ambientales del Pacífico (IIAP), el actual informe presenta la caracterización de la flora asociada a la Ciénaga de Beté, la cual se viene estudiando desde hace alrededor de 16 años, durante los periodos (2008, 2018 y 2024), lo que permite generar datos para la toma de decisiones en aras de la conservación de esta zona del Chocó Biogeográfica de importancia ecosistémica, económica y social.
DOI: 10.6084/m9.figshare.29097272
title: Ultrasound contrast microbubbles to predict the microsphere distribution during transarterial radioembolization with holmium microspheres, an in vitro proof of concept study

description: Transarterial radioembolization (TARE) is an established treatment method for non-resectable liver tumors. One of the challenges of the approach is the accurate prediction of the microsphere biodistribution in the liver. We propose to use ultrasound contrast microbubbles as holmium microsphere precursors, which allows real-time prediction of the microsphere trajectories and biodistribution using dynamic contrast-enhanced ultrasound (DCE-US). The immediate goal in this in vitro study was to investigate the predictive capabilities of microbubbles as microsphere precursors. The study was conducted in an experimental in vitro model which represents the bifurcating right branch of the hepatic artery. A controlled injection of experimental BR-14 ultrasound contrast microbubbles and non-radioactive holmium-165 microspheres was performed in separate consecutive experiments in an arterial flow phantom. The microbubbles and microspheres were collected separately at the outlets of the phantom and counted using a Coulter counter to determine their distribution over the different outlets. The flow profile, the injection velocity, and the catheter position were monitored during the measurements to ensure stability. The results showed a good correlation between the microbubble and the microsphere distributions (p = 0.0038, r = 0.88) measured at the outlets. Differences in the distributions could be attributed to the characteristics of microbubbles and microspheres alone (e.g. particle size and concentration), since critical parameters were kept stable between the two experiments. The current in vitro study provides confidence that the microsphere biodistribution can be predicted using contrast microbubbles. The comparison provided by this study forms a foundation for the development of a DCE-US guided TARE treatment.
DOI: 10.6084/m9.figshare.29097272.v1
title: Ultrasound contrast microbubbles to predict the microsphere distribution during transarterial radioembolization with holmium microspheres, an in vitro proof of concept study

description: Transarterial radioembolization (TARE) is an established treatment method for non-resectable liver tumors. One of the challenges of the approach is the accurate prediction of the microsphere biodistribution in the liver. We propose to use ultrasound contrast microbubbles as holmium microsphere precursors, which allows real-time prediction of the microsphere trajectories and biodistribution using dynamic contrast-enhanced ultrasound (DCE-US). The immediate goal in this in vitro study was to investigate the predictive capabilities of microbubbles as microsphere precursors. The study was conducted in an experimental in vitro model which represents the bifurcating right branch of the hepatic artery. A controlled injection of experimental BR-14 ultrasound contrast microbubbles and non-radioactive holmium-165 microspheres was performed in separate consecutive experiments in an arterial flow phantom. The microbubbles and microspheres were collected separately at the outlets of the phantom and counted using a Coulter counter to determine their distribution over the different outlets. The flow profile, the injection velocity, and the catheter position were monitored during the measurements to ensure stability. The results showed a good correlation between the microbubble and the microsphere distributions (p = 0.0038, r = 0.88) measured at the outlets. Differences in the distributions could be attributed to the characteristics of microbubbles and microspheres alone (e.g. particle size and concentration), since critical parameters were kept stable between the two experiments. The current in vitro study provides confidence that the microsphere biodistribution can be predicted using contrast microbubbles. The comparison provided by this study forms a foundation for the development of a DCE-US guided TARE treatment.
DOI: 10.34740/kaggle/dsv/11867033
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.5281/zenodo.13765595
title: Type-II kinase inhibitors that target Parkinson's Disease-associated LRRK2

description: This dataset includes all of the tabular data used in the tables and figures in the article.

Aberrant increases in kinase activity of leucine-rich repeat kinase 2 (LRRK2) are associated with Parkinson’s disease (PD). Numerous LRRK2-selective type-I kinase inhibitors have been developed and some have entered clinical trials. In this study, we present the first LRRK2-selective type-II kinase inhibitors. Targeting the inactive conformation of LRRK2 is functionally distinct from targeting the active-like conformation using type-I inhibitors. We designed these inhibitors using a combinatorial chemistry approach fusing selective LRRK2 type-I and promiscuous type-II inhibitors by iterative cycles of synthesis supported by structural biology and activity testing. Our current lead structures are selective and potent LRRK2 inhibitors. Through cellular assays, cryo-electron microscopy structural analysis, and in vitro motility assays, we show that our inhibitors stabilize the open, inactive kinase conformation. These new conformation-specific compounds will be invaluable as tools to study LRRK2’s function and regulation, and expand the potential therapeutic options for PD.
DOI: 10.5281/zenodo.13960474
title: Type-II kinase inhibitors that target Parkinson's Disease-associated LRRK2

description: This dataset includes all of the tabular data used in the tables and figures in the article. Additionally, we provide a table with key resources for data aquisition.

Aberrant increases in kinase activity of leucine-rich repeat kinase 2 (LRRK2) are associated with Parkinson’s disease (PD). Numerous LRRK2-selective type-I kinase inhibitors have been developed and some have entered clinical trials. In this study, we present the first LRRK2-selective type-II kinase inhibitors. Targeting the inactive conformation of LRRK2 is functionally distinct from targeting the active-like conformation using type-I inhibitors. We designed these inhibitors using a combinatorial chemistry approach fusing selective LRRK2 type-I and promiscuous type-II inhibitors by iterative cycles of synthesis supported by structural biology and activity testing. Our current lead structures are selective and potent LRRK2 inhibitors. Through cellular assays, cryo-electron microscopy structural analysis, and in vitro motility assays, we show that our inhibitors stabilize the open, inactive kinase conformation. These new conformation-specific compounds will be invaluable as tools to study LRRK2’s function and regulation, and expand the potential therapeutic options for PD.
DOI: 10.5281/zenodo.13765594
title: Type-II kinase inhibitors that target Parkinson's Disease-associated LRRK2

description: This dataset includes all of the tabular data used in the tables and figures in the article. Additionally, we provide a table with key resources for data aquisition.

Aberrant increases in kinase activity of leucine-rich repeat kinase 2 (LRRK2) are associated with Parkinson’s disease (PD). Numerous LRRK2-selective type-I kinase inhibitors have been developed and some have entered clinical trials. In this study, we present the first LRRK2-selective type-II kinase inhibitors. Targeting the inactive conformation of LRRK2 is functionally distinct from targeting the active-like conformation using type-I inhibitors. We designed these inhibitors using a combinatorial chemistry approach fusing selective LRRK2 type-I and promiscuous type-II inhibitors by iterative cycles of synthesis supported by structural biology and activity testing. Our current lead structures are selective and potent LRRK2 inhibitors. Through cellular assays, cryo-electron microscopy structural analysis, and in vitro motility assays, we show that our inhibitors stabilize the open, inactive kinase conformation. These new conformation-specific compounds will be invaluable as tools to study LRRK2’s function and regulation, and expand the potential therapeutic options for PD.
DOI: 10.5281/zenodo.13771208
title: Type-II kinase inhibitors that target Parkinson's Disease-associated LRRK2

description: This dataset includes all of the tabular data used in the tables and figures in the article.

Aberrant increases in kinase activity of leucine-rich repeat kinase 2 (LRRK2) are associated with Parkinson’s disease (PD). Numerous LRRK2-selective type-I kinase inhibitors have been developed and some have entered clinical trials. In this study, we present the first LRRK2-selective type-II kinase inhibitors. Targeting the inactive conformation of LRRK2 is functionally distinct from targeting the active-like conformation using type-I inhibitors. We designed these inhibitors using a combinatorial chemistry approach fusing selective LRRK2 type-I and promiscuous type-II inhibitors by iterative cycles of synthesis supported by structural biology and activity testing. Our current lead structures are selective and potent LRRK2 inhibitors. Through cellular assays, cryo-electron microscopy structural analysis, and in vitro motility assays, we show that our inhibitors stabilize the open, inactive kinase conformation. These new conformation-specific compounds will be invaluable as tools to study LRRK2’s function and regulation, and expand the potential therapeutic options for PD.
DOI: 10.5281/zenodo.14032963
title: Type-II kinase inhibitors that target Parkinson's Disease-associated LRRK2

description: This dataset includes all of the tabular data used in the tables and figures in the article. Additionally, we provide a table with key resources for data aquisition.

Aberrant increases in kinase activity of leucine-rich repeat kinase 2 (LRRK2) are associated with Parkinson’s disease (PD). Numerous LRRK2-selective type-I kinase inhibitors have been developed and some have entered clinical trials. In this study, we present the first LRRK2-selective type-II kinase inhibitors. Targeting the inactive conformation of LRRK2 is functionally distinct from targeting the active-like conformation using type-I inhibitors. We designed these inhibitors using a combinatorial chemistry approach fusing selective LRRK2 type-I and promiscuous type-II inhibitors by iterative cycles of synthesis supported by structural biology and activity testing. Our current lead structures are selective and potent LRRK2 inhibitors. Through cellular assays, cryo-electron microscopy structural analysis, and in vitro motility assays, we show that our inhibitors stabilize the open, inactive kinase conformation. These new conformation-specific compounds will be invaluable as tools to study LRRK2’s function and regulation, and expand the potential therapeutic options for PD.
DOI: 10.5281/zenodo.14857718
title: Type-II kinase inhibitors that target Parkinson's Disease-associated LRRK2

description: This dataset includes all of the tabular data used in the tables and figures in the article. Additionally, we provide a table with key resources for data aquisition.

Aberrant increases in kinase activity of leucine-rich repeat kinase 2 (LRRK2) are associated with Parkinson’s disease (PD). Numerous LRRK2-selective type-I kinase inhibitors have been developed and some have entered clinical trials. In this study, we present the first LRRK2-selective type-II kinase inhibitors. Targeting the inactive conformation of LRRK2 is functionally distinct from targeting the active-like conformation using type-I inhibitors. We designed these inhibitors using a combinatorial chemistry approach fusing selective LRRK2 type-I and promiscuous type-II inhibitors by iterative cycles of synthesis supported by structural biology and activity testing. Our current lead structures are selective and potent LRRK2 inhibitors. Through cellular assays, cryo-electron microscopy structural analysis, and in vitro motility assays, we show that our inhibitors stabilize the open, inactive kinase conformation. These new conformation-specific compounds will be invaluable as tools to study LRRK2’s function and regulation, and expand the potential therapeutic options for PD.
DOI: 10.15468/dl.ugzd5q
title: Occurrence Download

description: A dataset containing 1406 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((120.99318 -2.19446,122.01 -2.90128,122.35721 -2.90128,122.34481 -2.72767,121.6628 -2.09526,121.27839 -1.72325,120.99318 -2.19446))",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 1406 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006462-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d43nxu
title: Occurrence Download

description: A dataset containing 78575 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is AM: Freshwater Invertebrates (1900-2005)"
 ]
}

 The dataset includes 78575 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006457-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.