cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.9ghx3ffgv
title: Phylogeography, historical demography and systematics of the world’s smallest pythons (Pythonidae, Antaresia)

description: Advances from empirical studies in phylogeography, systematics and species
 delimitation highlight the importance of integrative approaches for
 quantifying taxonomic diversity. Genomic data have greatly improved our
 ability to discern both systematic diversity and evolutionary history.
 Here we combine analyses of mitochondrial DNA sequences, thousands of
 genome-wide SNPs and linear and geometric morphometrics
 on Antaresia, a clade of four currently recognised dwarf
 pythons from Australia and New Guinea (Antaresia childreni, A. stimsoni,
 A. maculosa and A. perthensis). Our integrative analyses
 of phylogenetics, population structure, species delimitation, historical
 demography and morphometrics revealed that the true evolutionary diversity
 is not well reflected in the current appraisal of the diversity of the
 group. We find that Antaresia childreni and A.
 stimsoni comprise a widespread network of populations connected
 by gene flow and without evidence of species-level divergence among them.
 However, A. maculosa shows considerable genetic
 structuring which leads us to recognise two subspecies in northeastern
 Australia and a new species in Torres Strait and New Guinea. These two
 contrasting cases of over and under estimation of diversity, respectively,
 illustrate the power of thorough integrative approaches into understanding
 evolution of biodiversity. Furthermore, our analyses of historical
 demographic patterns highlight the importance of the Kimberley, Pilbara
 and Cape York as origins of biodiversity in Australia.
DOI: 10.5061/dryad.r4xgxd2bv
title: Data from: Two different synchronous spectrofluorimetric approaches for simultaneous determination of febuxostat and ibuprofen: application to human plasma

description: Two green, sensitive and simple synchronous spectrofluorimetric methods
 were developed for the simultaneous estimation of febuxostat and ibuprofen
 for the first time. Method I is constant-wavelength synchronous
 spectrofluorimetry where febuxostat and ibuprofen were recorded at 329 and
 258 nm, respectively using Δλ of 40 nm. Method II is constant-energy
 synchronous spectrofluorimetry using a wave-number interval of -4000 cm−1.
 All measurements were performed in a borate buffer of pH 7 and distilled
 water for dilution which increased the method greenness. The two methods
 were rectilinear over the concentration ranges of 30.0-700.0 ng mL-1 and
 0.5-9.0 µg mL-1 in method I and 20.0-500.0 ng mL-1 and 0.1-8.0 µg mL-1 in
 method II for febuxostat and ibuprofen, respectively. High sensitivity was
 attained for the two drugs with LODs down to 0.40 and 5.6 ng mL-1 in
 method I and 0.25 and 3.4 ng mL-1 in method II for febuxostat and
 ibuprofen, respectively. Recovery percentages were in the range of
 97.3-101.9 % after extraction from spiked human plasma samples,
 demonstrating high bioanalytical applicability. The two methods were
 furtherly applied to tablet dosage forms with good recovery results.
 Furthermore, the method greenness was assessed according to the analytical
 Eco-Scale and Green Analytical Procedure Index guidelines.
DOI: 10.5061/dryad.n02v6wwwg
title: Extra high superoxide dismutase in host tissue upgrades bleaching resistance in the “thermal adapted” and Durusdinium trenchii-associating coral

description: Global warming threatens reef-building corals with large scale bleaching
 events. Before being too late, uncovering potential adaptive capabilities
 to increasing temperature becomes one of the major thinking of saving
 corals. This study presents two coral species (Platygyra verweyi and
 Isopora palifera) surviving from a reef with regular hot water influx via
 a nearby nuclear power plant exhibited completely different bleaching
 susceptibility to acute thermal stress, even though both species shared
 several so-called “winner” characteristics (e.g., containing Durusdinium
 trenchii, thick tissue etc.). For P. verweyi, no algal density declined in
 the corals within 3-days after directly transferring from 25 to 31°C. But,
 same treatment caused I. palifera losing &gt;70% algal symbionts
 within 24h. Most distinct feature between two coral species was attributed
 to overwhelmingly higher constitutive superoxide dismutase (ca.10 folds)
 and catalase (ca. 3 folds) in P. verweyi than in I. palifera. Moreover, P.
 verweyi also contained significantly higher saturated and lower
 mono-unsaturated fatty acid, especially a long-chain saturated fatty acid
 (C22:0), than I. palifera, and constantly associated with symbiotic
 bacteria, Endozoicomonas, which was not found in I. palifera. However,
 antibiotics treatment and inoculation tests did not support Endozoicomonas
 directly contributed to the thermal-resisting capability. This study
 highlights that, besides association with thermal tolerable algal
 symbiont, high level of constitutive antioxidant enzymes in coral host
 would be crucial for coral survivorship in the more fluctuated and high
 temperature environments.
DOI: 10.5061/dryad.v9s4mw6v2
title: Land use changes threaten bird taxonomic and functional diversity across the Mediterranean basin: a spatial analysis to prioritize monitoring for conservation

description: Land use changes rank among the highest threats to biodiversity, but
 assessment of their ecological impact is impaired by data paucity in vast
 regions of the world. For birds, land use changes may mean habitat loss or
 fragmentation, changes in resource availability and disruption of biotic
 interactions or dispersal pathways. As a result, avian population sizes
 and assemblage diversity decline in areas subjected to urbanization,
 agricultural intensification and land abandonment worldwide. This threat
 is especially sensitive in hotspots such as the Mediterranean basin, where
 avifaunas of several biogeographic origins meet, encompassing numerous
 endemic taxa and ecological specialists with low resilience to habitat
 modifications. Here, we correlated several facets of bird taxonomic and
 functional diversity to a fine-grained land-use change classification, in
 order to identify priority areas in need for enforced protocoled bird
 sampling in a conservation prospect. For this, we computed the species
 richness, functional richness, originality and specificity of 211 bird
 assemblages based on bird extent-of-occurrence data for 279 species and 10
 ecological traits. We used a spatialized regression model to correlate
 bird diversity patterns with bioclimatic gradients and land use change
 between 1992 and 2018, assessed from an unsupervised clustering on 2km
 resolution data. We showed that species-rich bird assemblages are
 subjected to agricultural intensification, while functionally diverse
 assemblages are mainly undergoing desertification and land abandonment.
 Unfortunately, most of these changes occur in areas where protocoled bird
 surveys with sufficient spatial and temporal resolution are lacking. In
 light of these results, we urge for the setting of bird monitoring
 programs targeted mainly on parts of North-Africa and the Levant, in order
 to allow a region-level evaluation of the threat posed by recent land use
 changes on the exceptional avifaunistic diversity of the basin. Fostering
 such regional-scale evaluations of congruences between human threats and
 centers of diversity is a necessary preliminary step for a pragmatic
 response to data deficiencies and ultimately setting appropriate responses
 to avoid the collapse of avian assemblages.
description: A ReadMe file containing all necessary information on data and
 processing have been uploaded along with the datasets.
DOI: 10.15468/dl.c473xx
title: Occurrence Download

description: A dataset containing 379 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Afzelia xylocarpa"
 ]
}

 The dataset includes 379 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002814-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.hx3ffbgdd
title: Behavior of the clonal raider ant Ooceraea biroi in colonies with different demographic, genetic, and morphological composition

description: Raw behavioral data (individual ant positions over time), and summary
 behavioral data (at the individual, colony, and subcolony levels) for all
 ant colonies used in 4 experiments, as well as R scripts for
 statistical analyses, included in the
 manuscript "Response thresholds alone cannot explain
 empirical patterns of division of labor in social insects". No
 restrictions for reuse.
DOI: 10.5061/dryad.p5hqbzkp6
title: Data from: Crypsis in the pelagic realm: evidence from exceptionally preserved fossil fish larvae from the Eocene Stolleklint Clay of Denmark

description: Marine deposits of earliest Eocene age in northern Jutland, Denmark, are
 renowned for yielding diverse teleost assemblages that have proved central
 for enhancing our understanding of the early evolution of many extant
 actinopterygian clades. In this study, we investigate diminutive larval
 fish fossils from the Stolleklint Clay, Ølst Formation, that retain
 multiple soft-tissue features preserved as distinct dark-coloured stains.
 In order to examine the elemental and molecular composition of these soft
 parts, we employed a combination of time-of-flight secondary ion mass
 spectrometry (ToF-SIMS), scanning electron microscopy (SEM) and
 energy-dispersive X-ray spectroscopy (EDS). Our analyses revealed that the
 preserved structures contain chemically identifiable eumelanin intimately
 associated with densely aggregated microbodies that are morphologically
 consistent with melanosome organelles. Thus, we conclude that the
 carbonaceous structures represent traces of originally melanized body
 parts, including the eyes and peritoneum. Comparable pigmentation patterns
 are seen in many extant teleost larvae that use semi-transparency as a
 means of camouflage in pelagic environments, to suggest a similar visual
 appearance of the Stolleklint Clay fish fossils. This in turn suggests
 that adaptations for concealment and UV-protection had evolved already by
 the beginning of the Eocene, notably during a time interval characterized
 by an extreme greenhouse climate, when the global fish fauna become
 increasingly modern in composition.
DOI: 10.6084/m9.figshare.31144312.v1
title: Comparing methods to measure wearable device adherence for physical activity monitoring for persons with autism: A prospective observational cohort study

description: Individuals with autism spectrum disorder (ASD) have higher rates of obesity and exhibit more sedentary behaviors than neurotypical peers. Use of wearable devices (WD) to target insufficient physical activity (PA) in this population has increased over the past decade. However, standardized methods for assessing WD adherence remain limited among this understudied population. A prospective observational cohort design was used to compare two methods for determining WD adherence for monitoring PA in adolescents and adults with ASD. Subjects were enrolled in an 8-week telehealth program aimed at improving PA among adolescents and adults with ASD. The Fitbit Inspire 3 WD was utilized for PA tracking and self-monitoring. Subject step activity and heart rate (HR) data were collected for an 8-week period via FITABASE management platform. Adherence was calculated using two methods. Method-A was defined as ≥10-hr daily wear-time based on HR monitoring; Method-B was defined as ≥ 500 steps/day. Observational data collected via researcher field notes documented participant-reported factors and/or behaviors that influenced WD adherence. Data from twenty-seven subjects (21 males, 6 females) ages 14 to 28 years (mean: 18.85 years) were analyzed. Adherence was significantly higher when calculated using Method B (mean = 40 days, 5.4 weeks) compared to Method A (mean = 24 days, 2.8 weeks; <i>p</i>  &lt; .001). Observational data identified disability-related behaviors that negatively impacted Method A derived adherence. Using HR-based measures of adherence may underestimate device use in individuals with ASD, potentially setting unrealistic expectations for continuous wear. Step-based metrics provides a more inclusive and pragmatic approach for assessing WD adherence in this population, with implications for future intervention design and evaluation. This study highlights the need to tailor WD adherence definitions to the behavioral and sensory profiles of neurodiverse populations. Further study is warranted.
DOI: 10.5061/dryad.9kd51c5gm
title: Selection against individuals from genetic introgression of escaped farmed salmon in a natural population of Atlantic salmon

description: The viability of wild Atlantic salmon populations is threatened by genetic
 introgression from escaped farmed salmon. Farmed Atlantic salmon are
 genetically improved for important commercial traits and a life in
 captivity but are poorly adapted to the natural environment. The rate of
 geneflow from escaped farmed to wild salmon depends on their spawning
 success and on offspring survival at various life-stages. We here
 investigate relative survival of introgressed juvenile Atlantic salmon
 (parr) in a river in northern Norway. The studied population has
 experienced genetic introgression from farmed salmon for about four
 generations (20 years). We followed two cohorts of parr from the year of
 hatching (0+) to the age of two years (2+). Farmed genetic introgression
 was quantified at the individual level and on a continuous scale using
 diagnostic SNPs. Population-level genetic introgression decreased from 0+
 to 2+ by 64% (2011 cohort) and 37% (2013 cohort) . This change was driven
 by a 70% (2011 cohort) and 49% (2013 cohort) lower survival from age 0+ to
 2+ in introgressed parr compared to parr of wild origin. Our observations
 show that there is natural selection against genetic introgression with a
 potential cost of lower productivity.The viability of wild Atlantic salmon
 populations is threatened by genetic introgression from escaped farmed
 salmon. Farmed Atlantic salmon are genetically improved for important
 commercial traits and a life in captivity but are poorly adapted to the
 natural environment. The rate of geneflow from escaped farmed to wild
 salmon depends on their spawning success and on offspring survival at
 various life-stages. We here investigate relative survival of introgressed
 juvenile Atlantic salmon (parr) in a river in northern Norway. The studied
 population has experienced genetic introgression from farmed salmon for
 about four generations (20 years). We followed two cohorts of parr from
 the year of hatching (0+) to the age of two years (2+). Farmed genetic
 introgression was quantified at the individual level and on a continuous
 scale using diagnostic SNPs. Population-level genetic introgression
 decreased from 0+ to 2+ by 64% (2011 cohort) and 37% (2013 cohort) . This
 change was driven by a 70% (2011 cohort) and 49% (2013 cohort) lower
 survival from age 0+ to 2+ in introgressed parr compared to parr of wild
 origin. Our observations show that there is natural selection against
 genetic introgression with a potential cost of lower productivity.
description: See paper for Methods.
description: See README file.
DOI: 10.6084/m9.figshare.31144312
title: Comparing methods to measure wearable device adherence for physical activity monitoring for persons with autism: A prospective observational cohort study

description: Individuals with autism spectrum disorder (ASD) have higher rates of obesity and exhibit more sedentary behaviors than neurotypical peers. Use of wearable devices (WD) to target insufficient physical activity (PA) in this population has increased over the past decade. However, standardized methods for assessing WD adherence remain limited among this understudied population. A prospective observational cohort design was used to compare two methods for determining WD adherence for monitoring PA in adolescents and adults with ASD. Subjects were enrolled in an 8-week telehealth program aimed at improving PA among adolescents and adults with ASD. The Fitbit Inspire 3 WD was utilized for PA tracking and self-monitoring. Subject step activity and heart rate (HR) data were collected for an 8-week period via FITABASE management platform. Adherence was calculated using two methods. Method-A was defined as ≥10-hr daily wear-time based on HR monitoring; Method-B was defined as ≥ 500 steps/day. Observational data collected via researcher field notes documented participant-reported factors and/or behaviors that influenced WD adherence. Data from twenty-seven subjects (21 males, 6 females) ages 14 to 28 years (mean: 18.85 years) were analyzed. Adherence was significantly higher when calculated using Method B (mean = 40 days, 5.4 weeks) compared to Method A (mean = 24 days, 2.8 weeks; <i>p</i>  &lt; .001). Observational data identified disability-related behaviors that negatively impacted Method A derived adherence. Using HR-based measures of adherence may underestimate device use in individuals with ASD, potentially setting unrealistic expectations for continuous wear. Step-based metrics provides a more inclusive and pragmatic approach for assessing WD adherence in this population, with implications for future intervention design and evaluation. This study highlights the need to tailor WD adherence definitions to the behavioral and sensory profiles of neurodiverse populations. Further study is warranted.
DOI: 10.5061/dryad.3j9kd51hf
title: The relative effects of pace of life and habitat characteristics on the evolution of sexual ornaments: a comparative assessment

description: Selection may favor greater investment into sexual ornaments when
 opportunities for future reproduction are limited (e.g., due to high adult
 mortality). However, a key driver of mortality, predation, typically
 selects against elaborate sexual ornaments. Here, we examine the evolution
 of sexual ornaments in a group of killifishes, which have marked contrasts
 in life-history strategy between species and inhabit environments that
 differ in their accessibility to aquatic predators. We first assessed if
 the size of sexual ornaments (unpaired fins) influenced swimming
 performance and found that larger fins negatively affected swimming
 performance. Second, we investigated whether the evolution of larger
 ornamental fins is driven primarily by the pace of life-history (i.e.,
 investment into current vs future reproduction) or habitat type (as a
 proxy for predation risk). We found that males from species inhabiting
 ephemeral habitats with lower predation risk had both larger fins and more
 pronounced sexual dimorphism in fin size, compared to males from more
 accessible permanent habitats. Our results indicate that enlarged
 ornamental fins impair locomotion and evolve more frequently in
 environments that are less accessible to predators, but with no clear
 association to the pace of life-history. We provide a rare link between
 the evolution of sexual ornaments, decreases in locomotion, and natural
 selection on ornaments through vulnerability to predation.
DOI: 10.6084/m9.figshare.31165210
title: DATA SET OF DRUG CASES BY PROVINCE FOR THE FOURTH QUARTER OF 2024 IN INDONESIA

description: This dataset contains the number of reported criminal offenses in Indonesia, aggregated by Regional Police (Kepolisian Daerah/Polda). The data provide a regional overview of crime incidents and can be used for criminology research, law enforcement analysis, public safety monitoring, and statistical/spatial analysis across Indonesian provinces. The dataset is provided in CSV format and supports comparative analysis between regions and time periods (if available).
DOI: 10.6084/m9.figshare.31165210.v1
title: DATASET KASUS NARKOBA BERDASARKAN PROVINSI TRIWULAN IV 2024

description: This dataset contains the number of reported criminal offenses in Indonesia, aggregated by Regional Police (Kepolisian Daerah/Polda). The data provide a regional overview of crime incidents and can be used for criminology research, law enforcement analysis, public safety monitoring, and statistical/spatial analysis across Indonesian provinces. The dataset is provided in CSV format and supports comparative analysis between regions and time periods (if available).
DOI: 10.6084/m9.figshare.31165210.v2
title: DATA SET OF DRUG CASES BY PROVINCE FOR THE FOURTH QUARTER OF 2024 IN INDONESIA

description: This dataset contains the number of reported criminal offenses in Indonesia, aggregated by Regional Police (Kepolisian Daerah/Polda). The data provide a regional overview of crime incidents and can be used for criminology research, law enforcement analysis, public safety monitoring, and statistical/spatial analysis across Indonesian provinces. The dataset is provided in CSV format and supports comparative analysis between regions and time periods (if available).
DOI: 10.15468/dl.xm24cx
title: Occurrence Download

description: A dataset containing 695 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dialium angolense",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 695 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002815-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.