cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.23728/b2share.5cbeaba529aa4c9da4802f6ba307981e
title: Access the university. A spatial Heckman probit model.

description: Dataset accompanying the publication "Equal opportunities to access the university in Chile? An application with a spatial Heckman probit model" (Land, already submitted). This study contributes to the debate on accessibility of higher education in Chile, focusing on both socioeconomic and geospatial dimensions of access to university study. The central question we address in this paper is the following: Does geography (physical distance and neighborhood effects) play a significant role in determining accessibility of higher education in Chile? We use Heckman probit-type (Heckit) models to adjust for selection in the process of completing the trajectory towards higher education – that is, pre-selection, application to study at university, and ultimately admission (or denial) to a higher education institution. The results shows that the geospatial elements have a significant local effect on the student’s application and access to Chilean universities.
description: SLX-type spatial Heckman probit model of local spatial autocorrelation.
description: A STATA package must be previously installed: "st0085_2".
description: The publication contains anonymized records of 2016 PSU candidates (Chile), that is, individual-level determinants of university access in Chile. - Observations = 299,783 - Variables = 25 - Year = 2016
DOI: 10.6084/m9.figshare.12988313
title: Continuation and user satisfaction of the levonorgestrel intrauterine system (LNG IUS) contraceptive in Nigeria

description: Dataset was from a prospective longitudinal phone survey made up of baseline survey of users at 2-weeks post-insertion of LNG IUS, recruited from 40 clinics across 17 states in Nigeria, with follow-up survey at the third and twelfth-month. A total 208 users were interviewed at baseline, 98 at three-months and 73 at twelve-month. User family planning and LNG IUS use experiences were elicited, and the continuation and satisfaction with the method at three and twelve months were also assessed. Average age of users of LNG IUS in the study at baseline is 33.7±6, and majority are aged 35 years and older (44%), followed by those aged 30-34 years and 25-29 years old which are approximately 30% and 20%. At the 3 and 12-months post-insertion, 97% (95% CI: 91.3, 99.3) and 92% (95% CI: 82.9, 96.9), respectively, reported still using the LNG IUS, with none out of the few users who discontinued the method reporting a method failure. Discontinuation was mainly a result of the experience of menstrual bleeding or amenorrhea (25.0%), experiences of pain with the method (18.8%), and partner complaining about strings (16.7%). High satisfaction with the LNG IUS (76.5% at three months and 86.3% at 12 months post-insertion) was reported. Satisfaction with LNG IUS was significantly associated with not having breast tenderness/pain (88.2%) and no vaginal bacterial infection (87.5%) at 12 months compared to experiencing breast tender/pain (50.0%) and vaginal infection (0.0%) (p&lt;0.05).
DOI: 10.6084/m9.figshare.12988313.v10
title: Continuation and user satisfaction of the levonorgestrel intrauterine system (LNG IUS) contraceptive in Nigeria

description: Dataset was from a prospective longitudinal phone survey made up of baseline survey of users at 2-weeks post-insertion of LNG IUS, recruited from 40 clinics across 17 states in Nigeria, with follow-up survey at the third and twelfth-month. A total 208 users were interviewed at baseline, 98 at three-months and 73 at twelve-month. User family planning and LNG IUS use experiences were elicited, and the continuation and satisfaction with the method at three and twelve months were also assessed. Average age of users of LNG IUS in the study at baseline is 33.7±6, and majority are aged 35 years and older (44%), followed by those aged 30-34 years and 25-29 years old which are approximately 30% and 20%. At the 3 and 12-months post-insertion, 97% (95% CI: 91.3, 99.3) and 92% (95% CI: 82.9, 96.9), respectively, reported still using the LNG IUS, with none out of the few users who discontinued the method reporting a method failure. Discontinuation was mainly a result of the experience of menstrual bleeding or amenorrhea (25.0%), experiences of pain with the method (18.8%), and partner complaining about strings (16.7%). High satisfaction with the LNG IUS (76.5% at three months and 86.3% at 12 months post-insertion) was reported. Satisfaction with LNG IUS was significantly associated with not having breast tenderness/pain (88.2%) and no vaginal bacterial infection (87.5%) at 12 months compared to experiencing breast tender/pain (50.0%) and vaginal infection (0.0%) (p&lt;0.05).
DOI: 10.15784/601493
title: Erebus volcano/Ross Island Magnetotelluric (MT) data

description: Submitted zip file contains the tensor impedance and tipper responses from magnetotelluric (MT) surveying at 130 sites over Erebus volcano and Ross Island from 2014-2017. The individual site responses are provided in edi format, which is the self-explained global standard for MT response archiving and distribution. The X coordinate axis for all sites is Grid North.
DOI: 10.5281/zenodo.4784952
title: Cardiac patch transplantation instruments for robotic minimally invasive cardiac surgery: initial proof-of-concept designs and surgery in a porcine cadaver

description: BACKGROUND: Damaged cardiac tissues could potentially be regenerated by transplanting bioengineered cardiac patches to the heart surface. To be fully paradigm-shifting, such patches may need to be transplanted using minimally invasive robotic cardiac surgery (not only traditional open surgery). Here, we present novel robotic designs, initial prototyping and a new surgical operation for instruments to transplant patches <em>via </em>robotic minimally invasive heart surgery. METHODS: Robotic surgical instruments and automated control systems were designed, tested with simulation software and prototyped. Surgical proof-of-concept testing was performed on a pig cadaver. RESULTS: Three robotic instrument designs were developed. The first (called “Claw” for the claw-like patch holder at the tip) operates on a rack and pinion mechanism. The second design (“Shell-Beak”) uses adjustable folding plates and rods with a bevel gear mechanism. The third (“HeartStamp”) utilizes a stamp platform protruding through an adjustable ring. For the HeartStamp, rods run through a cylindrical structure designed to fit a uniportal Video-Assisted Thorascopic Surgery (VATS) surgical port. Designed to work with or without a sterile sheath, the patch is pushed out by the stamp platform as it protrudes. Two instrument robotic control systems were designed, simulated <em>in silico</em> and one of these underwent early ‘sizing and learning’ prototyping as a proof-of-concept. To reflect real surgical conditions, surgery was run “live” and reported exactly (as-it-happened). We successfully picked up, transferred and released a patch onto the heart using the HeartStamp in a pig cadaver model. CONCLUSION: These world-first designs, early prototypes and a novel surgical operation pave the way for robotic instruments for automated keyhole patch transplantation to the heart. Our novel approach is presented for others to build upon free from restrictions or cost – potentially a significant moment in myocardial regeneration surgery which may open a therapeutic avenue for patients unfit for traditional open surgery.
description: Complete datasets associated with the article: Roche CD, Iyer GR, Nguyen MH, Mabroora S, Dome A, Sakr K, Pawar R, Lee V, Wilson CC, Gentile C. Cardiac patch transplantation instruments for robotic minimally invasive cardiac surgery: initial proof-of-concept designs and surgery in a porcine cadaver. Frontiers in Robotics and AI (2021).
DOI: 10.5281/zenodo.4784951
title: Cardiac patch transplantation instruments for robotic minimally invasive cardiac surgery: initial proof-of-concept designs and surgery in a porcine cadaver

description: BACKGROUND: Damaged cardiac tissues could potentially be regenerated by transplanting bioengineered cardiac patches to the heart surface. To be fully paradigm-shifting, such patches may need to be transplanted using minimally invasive robotic cardiac surgery (not only traditional open surgery). Here, we present novel robotic designs, initial prototyping and a new surgical operation for instruments to transplant patches <em>via </em>robotic minimally invasive heart surgery. METHODS: Robotic surgical instruments and automated control systems were designed, tested with simulation software and prototyped. Surgical proof-of-concept testing was performed on a pig cadaver. RESULTS: Three robotic instrument designs were developed. The first (called “Claw” for the claw-like patch holder at the tip) operates on a rack and pinion mechanism. The second design (“Shell-Beak”) uses adjustable folding plates and rods with a bevel gear mechanism. The third (“HeartStamp”) utilizes a stamp platform protruding through an adjustable ring. For the HeartStamp, rods run through a cylindrical structure designed to fit a uniportal Video-Assisted Thorascopic Surgery (VATS) surgical port. Designed to work with or without a sterile sheath, the patch is pushed out by the stamp platform as it protrudes. Two instrument robotic control systems were designed, simulated <em>in silico</em> and one of these underwent early ‘sizing and learning’ prototyping as a proof-of-concept. To reflect real surgical conditions, surgery was run “live” and reported exactly (as-it-happened). We successfully picked up, transferred and released a patch onto the heart using the HeartStamp in a pig cadaver model. CONCLUSION: These world-first designs, early prototypes and a novel surgical operation pave the way for robotic instruments for automated keyhole patch transplantation to the heart. Our novel approach is presented for others to build upon free from restrictions or cost – potentially a significant moment in myocardial regeneration surgery which may open a therapeutic avenue for patients unfit for traditional open surgery.
description: Complete datasets associated with the article: Roche CD, Iyer GR, Nguyen MH, Mabroora S, Dome A, Sakr K, Pawar R, Lee V, Wilson CC, Gentile C. Cardiac patch transplantation instruments for robotic minimally invasive cardiac surgery: initial proof-of-concept designs and surgery in a porcine cadaver. Frontiers in Robotics and AI (2021).
DOI: 10.5281/zenodo.5781769
title: 1H HRMAS NMR CPMG and ERETIC-CPMG datasets for aggressive, benign glioma and control sample classification

description: This repository contains the raw CPMG and ERETIC-CPMG HRMAS NMR data to reproduce the results reported in the following preprint: Targeted Metabolomics Analyses for Brain Tumor Margin Assessment During Surgery
DOI: 10.5281/zenodo.5774946
title: 1H HRMAS NMR CPMG and ERETIC-CPMG datasets for aggressive, benign glioma and control sample classification

description: This repository contains the raw CPMG and ERETIC-CPMG HRMAS NMR data to reproduce the results reported in the following preprint: Targeted Metabolomics Analyses for Brain Tumor Margin Assessment During Surgery
DOI: 10.17632/gt6j2h2dh4.1
title: ZC3H4 restricts non-coding transcription in human cells

description: Uncropped blots for Estell et al "ZC3H4 restricts non-coding transcription in human cells"
DOI: 10.17632/7fhwrgfh2s.2
title: Dataset for High-Entropy Alloys Phases

description: The dataset contains microstructural phase experimental observations and metallurgy-specific features as introduced and reported in peer-reviewed research articles. 

Secondary data (i.e. composition-specific features, alloy processing and post-processing parameters, and the resulting phases) were collected. Some typical empirical HEA design parameters were calculated using known methods. Data was processed using Excel and R, a language and environment for statistical computing, for purposes of visualization and data analysis.
DOI: 10.5281/zenodo.5781775
title: CNO-hM3D mediated perturbation of noradrenergic DBH-Cre neurons whole animal plethysmography recordings

description: Plethysmography on conscious, unrestrained mice was carried out as described on 6-12 week old adult animals with at least 12 animals in both the experimental and control group for a given experiment. Mice were subjected to a five-day habituation protocol with each day consisting of several minutes of handling, temperature taken by rectal probe, intraperitoneal saline injection, and 30 minutes in the plethysmography chamber. Mice were then tested within one week of the last day of conditioning. On the day of testing, mice were taken from their home cage, weighed, and rectal temperature was taken. Animals were then placed into an airtight, temperature controlled (~32<strong>°</strong>C) plethysmography chamber and allowed to acclimate for at least 20 minutes in room air (21% O<sub>2</sub>/79% N<sub>2</sub>) conditions. After acclimation and measurement under room air, the chamber gas was switched to a hypercapnic mixture of 5% CO<sub>2</sub>/21% O<sub>2</sub>/74% N<sub>2 </sub>for 20 minutes. Chamber gas was then switched back to room air for 20 minutes. The mice were briefly removed for rectal temperature measurement and intra-peritoneal injection of clozapine-N-oxide (CNO, National Institute of Mental Health Chemical Synthesis and Drug Supply Program) dissolved in saline (0.1 mg/mL) for an effective concentration 1 mg/kg. The animal was returned to the chamber for another 20 minutes of room air, 20 minutes of hypercapnia, and 20 minutes of room air. The animal was then removed from the chamber and rectal temperature was taken immediately afterwards and again 30 minutes after the termination of the experiment. The animal was placed in its own cage during these 30 minutes at the ambient room temperature (~23<strong>°</strong>C). Individual recordings for all animals expressing hM3D receptors in NA neurons are in this repository.
DOI: 10.5281/zenodo.5781774
title: CNO-hM3D mediated perturbation of noradrenergic DBH-Cre neurons whole animal plethysmography recordings

description: Plethysmography on conscious, unrestrained mice was carried out as described on 6-12 week old adult animals with at least 12 animals in both the experimental and control group for a given experiment. Mice were subjected to a five-day habituation protocol with each day consisting of several minutes of handling, temperature taken by rectal probe, intraperitoneal saline injection, and 30 minutes in the plethysmography chamber. Mice were then tested within one week of the last day of conditioning. On the day of testing, mice were taken from their home cage, weighed, and rectal temperature was taken. Animals were then placed into an airtight, temperature controlled (~32<strong>°</strong>C) plethysmography chamber and allowed to acclimate for at least 20 minutes in room air (21% O<sub>2</sub>/79% N<sub>2</sub>) conditions. After acclimation and measurement under room air, the chamber gas was switched to a hypercapnic mixture of 5% CO<sub>2</sub>/21% O<sub>2</sub>/74% N<sub>2 </sub>for 20 minutes. Chamber gas was then switched back to room air for 20 minutes. The mice were briefly removed for rectal temperature measurement and intra-peritoneal injection of clozapine-N-oxide (CNO, National Institute of Mental Health Chemical Synthesis and Drug Supply Program) dissolved in saline (0.1 mg/mL) for an effective concentration 1 mg/kg. The animal was returned to the chamber for another 20 minutes of room air, 20 minutes of hypercapnia, and 20 minutes of room air. The animal was then removed from the chamber and rectal temperature was taken immediately afterwards and again 30 minutes after the termination of the experiment. The animal was placed in its own cage during these 30 minutes at the ambient room temperature (~23<strong>°</strong>C). Individual recordings for all animals expressing hM3D receptors in NA neurons are in this repository.
DOI: 10.5281/zenodo.5781763
title: CNO-hM4D mediated perturbation of noradrenergic DBH-Cre neurons whole animal plethysmography recordings

description: Plethysmography on conscious, unrestrained mice was carried out as described on 6-12 week old adult animals with at least 12 animals in both the experimental and control group for a given experiment. Mice were subjected to a five-day habituation protocol with each day consisting of several minutes of handling, temperature taken by rectal probe, intraperitoneal saline injection, and 30 minutes in the plethysmography chamber. Mice were then tested within one week of the last day of conditioning. On the day of testing, mice were taken from their home cage, weighed, and rectal temperature was taken. Animals were then placed into an airtight, temperature controlled (~32<strong>°</strong>C) plethysmography chamber and allowed to acclimate for at least 20 minutes in room air (21% O<sub>2</sub>/79% N<sub>2</sub>) conditions. After acclimation and measurement under room air, the chamber gas was switched to a hypercapnic mixture of 5% CO<sub>2</sub>/21% O<sub>2</sub>/74% N<sub>2 </sub>for 20 minutes. Chamber gas was then switched back to room air for 20 minutes. The mice were briefly removed for rectal temperature measurement and intra-peritoneal injection of clozapine-N-oxide (CNO, National Institute of Mental Health Chemical Synthesis and Drug Supply Program) dissolved in saline (0.1 mg/mL) for an effective concentration 1 mg/kg. The animal was returned to the chamber for another 20 minutes of room air, 20 minutes of hypercapnia, and 20 minutes of room air. The animal was then removed from the chamber and rectal temperature was taken immediately afterwards and again 30 minutes after the termination of the experiment. The animal was placed in its own cage during these 30 minutes at the ambient room temperature (~23<strong>°</strong>C). Individual recordings for all animals expressing hM4D receptors in NA neurons are in this repository.
DOI: 10.5281/zenodo.5781762
title: CNO-hM4D mediated perturbation of noradrenergic DBH-Cre neurons whole animal plethysmography recordings

description: Plethysmography on conscious, unrestrained mice was carried out as described on 6-12 week old adult animals with at least 12 animals in both the experimental and control group for a given experiment. Mice were subjected to a five-day habituation protocol with each day consisting of several minutes of handling, temperature taken by rectal probe, intraperitoneal saline injection, and 30 minutes in the plethysmography chamber. Mice were then tested within one week of the last day of conditioning. On the day of testing, mice were taken from their home cage, weighed, and rectal temperature was taken. Animals were then placed into an airtight, temperature controlled (~32<strong>°</strong>C) plethysmography chamber and allowed to acclimate for at least 20 minutes in room air (21% O<sub>2</sub>/79% N<sub>2</sub>) conditions. After acclimation and measurement under room air, the chamber gas was switched to a hypercapnic mixture of 5% CO<sub>2</sub>/21% O<sub>2</sub>/74% N<sub>2 </sub>for 20 minutes. Chamber gas was then switched back to room air for 20 minutes. The mice were briefly removed for rectal temperature measurement and intra-peritoneal injection of clozapine-N-oxide (CNO, National Institute of Mental Health Chemical Synthesis and Drug Supply Program) dissolved in saline (0.1 mg/mL) for an effective concentration 1 mg/kg. The animal was returned to the chamber for another 20 minutes of room air, 20 minutes of hypercapnia, and 20 minutes of room air. The animal was then removed from the chamber and rectal temperature was taken immediately afterwards and again 30 minutes after the termination of the experiment. The animal was placed in its own cage during these 30 minutes at the ambient room temperature (~23<strong>°</strong>C). Individual recordings for all animals expressing hM4D receptors in NA neurons are in this repository.
DOI: 10.15468/dl.s937zf
title: Occurrence Download

description: A dataset containing 163261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-80.39129 43.40209,-80.37726 43.39059,-80.33848 43.40691,-80.30122 43.40747,-80.26601 43.41822,-80.22519 43.431,-80.17798 43.43897,-80.15119 43.44193,-80.11394 43.4436,-80.08893 43.45305,-80.05295 43.46046,-80.02463 43.46268,-80.00064 43.47046,-79.97054 43.48435,-79.95012 43.48897,-79.93737 43.50304,-79.9144 43.51618,-79.88455 43.5221,-79.86005 43.53209,-79.83836 43.54578,-79.82841 43.5578,-79.84857 43.57074,-79.87511 43.55225,-79.89424 43.5443,-79.9269 43.53579,-79.96058 43.52303,-79.97462 43.50693,-80.00958 43.49508,-80.03943 43.48472,-80.07413 43.47879,-80.10092 43.47268,-80.1466 43.46268,-80.19074 43.45861,-80.22034 43.45268,-80.2604 43.44045,-80.27877 43.43415,-80.30939 43.42711,-80.35481 43.42415,-80.3742 43.41692,-80.3918 43.40784,-80.39129 43.40209))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 163261 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105058-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pncyza
title: Occurrence Download

description: A dataset containing 94 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "Geometry POLYGON((-72.93875 -37.16557,-72.84182 -37.2048,-72.78182 -37.20919,-72.59355 -37.20591,-72.59412 -36.92332,-73.04183 -36.92332,-73.02337 -36.97038,-72.95413 -36.98021,-72.9849 -37.01462,-72.98183 -37.09197,-72.96029 -37.14718,-72.93875 -37.16557))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Mammalia",
 "Year 2000-2024"
 ]
}

 The dataset includes 94 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105097-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.raun78
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Bruchidius marginalis (Fabricius, 1775)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 125 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105099-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.br6sxm
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Silometopus curtus (Simon, 1881)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105101-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.