cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3556596.v1
title: Supplement 1. Matlab software used in our paper.

description: File List <b>Folder lists:</b> Data<br> The SB method<br> LRT(Ricker vs Saila-Lorda)<br> LRT(BH vs. sigmoid BH)<br> <br> <b>All files at once: </b>AllFilesAtOnce.zip (MD5: 34737f937a1a5d828ec0ecd1658fdc96) Description 'Data' contains a script file used for generating simulated data sets.It also contains example data sets. 'The SB method' contains functions for implementing the semiparametric Bayesian method to detect Allee effects. 'LRT(Ricker vs Saila-Lorda)' contains functions for conducting likelihood ratio test using the Ricker and the Saila-Lorda models to detect Allee effects. 'LRT(BH vs sigmoid BH)' contains functions for conducting likelihood ratio test using the Beverton-Holt and the sigmoid Beverton-Holt models to detect Allee effects.
DOI: 10.6084/m9.figshare.3556593
title: Appendix A. Relative abundance (%) of phospholipid fatty acids (PLFA) and neutral lipid fatty acids (NLFA) in four 13C6-glucose-treated cyanolichen species.

description: Relative abundance (%) of phospholipid fatty acids (PLFA) and neutral lipid fatty acids (NLFA) in four 13C6-glucose-treated cyanolichen species.
DOI: 10.6084/m9.figshare.3556593.v1
title: Appendix A. Relative abundance (%) of phospholipid fatty acids (PLFA) and neutral lipid fatty acids (NLFA) in four 13C6-glucose-treated cyanolichen species.

description: Relative abundance (%) of phospholipid fatty acids (PLFA) and neutral lipid fatty acids (NLFA) in four 13C6-glucose-treated cyanolichen species.
DOI: 10.6084/m9.figshare.3556590
title: Supplement 1. Original data on heterospecific pollen transfer, floral traits, pollination generalization level among 74 species, and parameters of the HPT network structure.

description: File List Directed_network.txt (MD5: 5397bbc1e9c459809a79f42456a4318c) Floral_trait_and_PG.txt (MD5: f883673e7890eaf6849467f2fdb52fbb) Description Directed_network.txt is an original data set of pollen donation and receipt among 74 flowering species in Shangri-La Alpine Botanical Garden, southwest China. Value in each cell represents the number of pollen grains transfered between plant species. Species number is corresponding to that in Fig. 2. Floral_trait_and_PG.txt presents data including relative visit frequency of major pollinators (Bee, bumblebee and Diptera) to 74 sympatric flowering species, pollination generalization level, floral traits (stigma area, stigma position and corolla open), (weighted) In- and Out-Degree, and Modularity. Species whose stigma were collected shown in 1 otherwise in 0.
DOI: 10.6084/m9.figshare.3556584
title: Appendix A. Changes in temperatures in the region from 1893–2011.

description: Changes in temperatures in the region from 1893–2011.
DOI: 10.6084/m9.figshare.3556584.v1
title: Appendix A. Changes in temperatures in the region from 1893–2011.

description: Changes in temperatures in the region from 1893–2011.
DOI: 10.6084/m9.figshare.3556581
title: Appendix B. Changes in the importance values of the most important species of the gap regeneration.

description: Changes in the importance values of the most important species of the gap regeneration.
DOI: 10.6084/m9.figshare.3556581.v1
title: Appendix B. Changes in the importance values of the most important species of the gap regeneration.

description: Changes in the importance values of the most important species of the gap regeneration.
DOI: 10.6084/m9.figshare.3556578
title: Appendix C. Correlations between gap regeneration in 2009 (total number, total basal area) and border tree mortality.

description: Correlations between gap regeneration in 2009 (total number, total basal area) and border tree mortality.
DOI: 10.6084/m9.figshare.3556578.v1
title: Appendix C. Correlations between gap regeneration in 2009 (total number, total basal area) and border tree mortality.

description: Correlations between gap regeneration in 2009 (total number, total basal area) and border tree mortality.
DOI: 10.6084/m9.figshare.3556575
title: Appendix D. Snag densities and formation rates for old-growth forests from the literature.

description: Snag densities and formation rates for old-growth forests from the literature.
DOI: 10.6084/m9.figshare.3556575.v1
title: Appendix D. Snag densities and formation rates for old-growth forests from the literature.

description: Snag densities and formation rates for old-growth forests from the literature.
DOI: 10.6084/m9.figshare.3556572
title: Appendix A. Supplementary climate and experimental design information including rainfall and temperature for the two sites as well as photographs and illustrations of the different treatments.

description: Supplementary climate and experimental design information including rainfall and temperature for the two sites as well as photographs and illustrations of the different treatments.
DOI: 10.6084/m9.figshare.3556572.v1
title: Appendix A. Supplementary climate and experimental design information including rainfall and temperature for the two sites as well as photographs and illustrations of the different treatments.

description: Supplementary climate and experimental design information including rainfall and temperature for the two sites as well as photographs and illustrations of the different treatments.
DOI: 10.6084/m9.figshare.3556569
title: Appendix B. Supplementary results illustrating differences in canopy diameter and basal area for trees growing with and without grasses.

description: Supplementary results illustrating differences in canopy diameter and basal area for trees growing with and without grasses.
DOI: 10.6084/m9.figshare.3556569.v1
title: Appendix B. Supplementary results illustrating differences in canopy diameter and basal area for trees growing with and without grasses.

description: Supplementary results illustrating differences in canopy diameter and basal area for trees growing with and without grasses.
DOI: 10.6084/m9.figshare.3556566
title: Appendix A. Study species and study site information, including photographs and summary of weather recorded during the study.

description: Study species and study site information, including photographs and summary of weather recorded during the study.
DOI: 10.6084/m9.figshare.3556566.v1
title: Appendix A. Study species and study site information, including photographs and summary of weather recorded during the study.

description: Study species and study site information, including photographs and summary of weather recorded during the study.
DOI: 10.6084/m9.figshare.3556563
title: Appendix B. Additional figures on body temperature and behavior patterns of White-browed Sparrow-Weavers (Plocepasser mahali).

description: Additional figures on body temperature and behavior patterns of White-browed Sparrow-Weavers (Plocepasser mahali).
DOI: 10.6084/m9.figshare.3556560
title: Appendix C. Final models describing body temperature and behavior in White-browed Sparrow-Weavers (Plocepasser mahali).

description: Final models describing body temperature and behavior in White-browed Sparrow-Weavers (Plocepasser mahali).
DOI: 10.6084/m9.figshare.3556560.v1
title: Appendix C. Final models describing body temperature and behavior in White-browed Sparrow-Weavers (Plocepasser mahali).

description: Final models describing body temperature and behavior in White-browed Sparrow-Weavers (Plocepasser mahali).
DOI: 10.6084/m9.figshare.3556557
title: Appendix A. A table showing regression parameter estimates, standard errors, and absolute coefficient of variation from the global model and from the multimodel inference (MMI) based on the seven candidate models.

description: A table showing regression parameter estimates, standard errors, and absolute coefficient of variation from the global model and from the multimodel inference (MMI) based on the seven candidate models.
DOI: 10.6084/m9.figshare.3556557.v1
title: Appendix A. A table showing regression parameter estimates, standard errors, and absolute coefficient of variation from the global model and from the multimodel inference (MMI) based on the seven candidate models.

description: A table showing regression parameter estimates, standard errors, and absolute coefficient of variation from the global model and from the multimodel inference (MMI) based on the seven candidate models.
DOI: 10.6084/m9.figshare.3556554
title: Appendix B. A table of the influence of age and sex on survival.

description: A table of the influence of age and sex on survival.
DOI: 10.6084/m9.figshare.3556554.v1
title: Appendix B. A table of the influence of age and sex on survival.

description: A table of the influence of age and sex on survival.
DOI: 10.6084/m9.figshare.3556551
title: Appendix C. A figure of monthly survival of Asian elephants as a function of temperature and rainfall in Myanmar during 1965–2000.

description: A figure of monthly survival of Asian elephants as a function of temperature and rainfall in Myanmar during 1965–2000.
DOI: 10.6084/m9.figshare.3556548
title: Supplement 1. R code for computer simulation model of time dynamics of predator and two prey species shown in Fig. 1.

description: File List Rcode_for_model_simulations_Figure_1.txt (md5: 338340b55f076dac7ccd48545c681460)Description This R code text file simulates time dynamics of predator and two prey species to produce the outcomes shown in Fig. 1 of the paper. State variable names and parameters are exactly as depicted in the text. The code is straighforward and carefully annotated to explain objectives of each section.
DOI: 10.6084/m9.figshare.3556548.v1
title: Supplement 1. R code for computer simulation model of time dynamics of predator and two prey species shown in Fig. 1.

description: File List Rcode_for_model_simulations_Figure_1.txt (md5: 338340b55f076dac7ccd48545c681460)Description This R code text file simulates time dynamics of predator and two prey species to produce the outcomes shown in Fig. 1 of the paper. State variable names and parameters are exactly as depicted in the text. The code is straighforward and carefully annotated to explain objectives of each section.
DOI: 10.6084/m9.figshare.3556545
title: Appendix A. Spatial autocorrelation analysis.

description: Spatial autocorrelation analysis.
DOI: 10.6084/m9.figshare.3556542
title: Appendix B. Full SEM path coeffients for each biogeographic realm.

description: Full SEM path coeffients for each biogeographic realm.
DOI: 10.6084/m9.figshare.3556539
title: Appendix C. Prey-to-predator ratios.

description: Prey-to-predator ratios.
DOI: 10.6084/m9.figshare.3556536
title: Appendix A. Effects of spatial variation in Cystoseira amentacea cover and availability of open space on spectral density and mean percent cover of algal turf.

description: Effects of spatial variation in Cystoseira amentacea cover and availability of open space on spectral density and mean percent cover of algal turf.
DOI: 10.6084/m9.figshare.3556536.v1
title: Appendix A. Effects of spatial variation in Cystoseira amentacea cover and availability of open space on spectral density and mean percent cover of algal turf.

description: Effects of spatial variation in Cystoseira amentacea cover and availability of open space on spectral density and mean percent cover of algal turf.
DOI: 10.6084/m9.figshare.3556533
title: Appendix B. Effects of Cystoseira amentacea clipping according to a random spatial pattern (CWS treatment).

description: Effects of Cystoseira amentacea clipping according to a random spatial pattern (CWS treatment).
DOI: 10.6084/m9.figshare.3556533.v1
title: Appendix B. Effects of Cystoseira amentacea clipping according to a random spatial pattern (CWS treatment).

description: Effects of Cystoseira amentacea clipping according to a random spatial pattern (CWS treatment).
DOI: 10.6084/m9.figshare.3556530
title: Appendix C. Spatial pattern of variation of large size gaps in white-noise sequences of disturbance (WS treatment).

description: Spatial pattern of variation of large size gaps in white-noise sequences of disturbance (WS treatment).
DOI: 10.6084/m9.figshare.3556530.v1
title: Appendix C. Spatial pattern of variation of large size gaps in white-noise sequences of disturbance (WS treatment).

description: Spatial pattern of variation of large size gaps in white-noise sequences of disturbance (WS treatment).
DOI: 10.6084/m9.figshare.3556527
title: Appendix A. Experimental treatments and efficacy: intertidal physical stress, herbivores, and nutrients.

description: Experimental treatments and efficacy: intertidal physical stress, herbivores, and nutrients.
DOI: 10.6084/m9.figshare.3556524
title: Appendix B. Invertebrate taxa and abundance in experimental plots.

description: Invertebrate taxa and abundance in experimental plots.
DOI: 10.6084/m9.figshare.3556524.v1
title: Appendix B. Invertebrate taxa and abundance in experimental plots.

description: Invertebrate taxa and abundance in experimental plots.
DOI: 10.6084/m9.figshare.3556521
title: Appendix C. Statistical analyses for cover, biomass, richness, diversity, evenness, herbivore abundance, and herbivore biomass.

description: Statistical analyses for cover, biomass, richness, diversity, evenness, herbivore abundance, and herbivore biomass.
DOI: 10.6084/m9.figshare.3556521.v1
title: Appendix C. Statistical analyses for cover, biomass, richness, diversity, evenness, herbivore abundance, and herbivore biomass.

description: Statistical analyses for cover, biomass, richness, diversity, evenness, herbivore abundance, and herbivore biomass.
DOI: 10.6084/m9.figshare.3556518
title: Appendix D. Algal taxa identified in experimental plots and multivariate analyses of species composition.

description: Algal taxa identified in experimental plots and multivariate analyses of species composition.
DOI: 10.6084/m9.figshare.3556518.v1
title: Appendix D. Algal taxa identified in experimental plots and multivariate analyses of species composition.

description: Algal taxa identified in experimental plots and multivariate analyses of species composition.
DOI: 10.6084/m9.figshare.3556515
title: Appendix A. Detailed methods of reciprocal coral transplantation: experimental design, environmental and biological monitoring.

description: Detailed methods of reciprocal coral transplantation: experimental design, environmental and biological monitoring.
DOI: 10.6084/m9.figshare.3556515.v1
title: Appendix A. Detailed methods of reciprocal coral transplantation: experimental design, environmental and biological monitoring.

description: Detailed methods of reciprocal coral transplantation: experimental design, environmental and biological monitoring.
DOI: 10.6084/m9.figshare.3556512
title: Appendix B. A figure depicting genotypic and environmental variation in the bleaching response of fragments of Acropora millepora at native and transplant sites.

description: A figure depicting genotypic and environmental variation in the bleaching response of fragments of Acropora millepora at native and transplant sites.
DOI: 10.6084/m9.figshare.3556512.v1
title: Appendix B. A figure depicting genotypic and environmental variation in the bleaching response of fragments of Acropora millepora at native and transplant sites.

description: A figure depicting genotypic and environmental variation in the bleaching response of fragments of Acropora millepora at native and transplant sites.
DOI: 10.6084/m9.figshare.3556509
title: Appendix C. A figure presenting turbidity data at the central and southern Great Barrier Reef during reciprocal coral transplantation.

description: A figure presenting turbidity data at the central and southern Great Barrier Reef during reciprocal coral transplantation.
DOI: 10.6084/m9.figshare.3556509.v1
title: Appendix C. A figure presenting turbidity data at the central and southern Great Barrier Reef during reciprocal coral transplantation.

description: A figure presenting turbidity data at the central and southern Great Barrier Reef during reciprocal coral transplantation.
DOI: 10.6084/m9.figshare.3556506
title: Appendix D. A figure and two tables presenting photochemical efficiency of corals reciprocally transplanted between the central and southern Great Barrier Reef.

description: A figure and two tables presenting photochemical efficiency of corals reciprocally transplanted between the central and southern Great Barrier Reef.
DOI: 10.6084/m9.figshare.3556506.v1
title: Appendix D. A figure and two tables presenting photochemical efficiency of corals reciprocally transplanted between the central and southern Great Barrier Reef.

description: A figure and two tables presenting photochemical efficiency of corals reciprocally transplanted between the central and southern Great Barrier Reef.
DOI: 10.6084/m9.figshare.3556503
title: Appendix E. Three tables summarizing statistical tests of genotype×environment interactions.

description: Three tables summarizing statistical tests of genotype×environment interactions.
DOI: 10.6084/m9.figshare.3556503.v1
title: Appendix E. Three tables summarizing statistical tests of genotype×environment interactions.

description: Three tables summarizing statistical tests of genotype×environment interactions.
DOI: 10.6084/m9.figshare.3556500
title: Appendix A. A detailed description of field methods.

description: A detailed description of field methods.
DOI: 10.6084/m9.figshare.3556500.v1
title: Appendix A. A detailed description of field methods.

description: A detailed description of field methods.
DOI: 10.6084/m9.figshare.3556497
title: Appendix A. Experimental design diagram and photo of experimental reef.

description: Experimental design diagram and photo of experimental reef.
DOI: 10.6084/m9.figshare.3556497.v1
title: Appendix A. Experimental design diagram and photo of experimental reef.

description: Experimental design diagram and photo of experimental reef.
DOI: 10.6084/m9.figshare.3556494
title: Appendix B. Species lists and rank abundance diagrams for 60- and 120-day censuses.

description: Species lists and rank abundance diagrams for 60- and 120-day censuses.
DOI: 10.6084/m9.figshare.3556494.v1
title: Appendix B. Species lists and rank abundance diagrams for 60- and 120-day censuses.

description: Species lists and rank abundance diagrams for 60- and 120-day censuses.
DOI: 10.6084/m9.figshare.3556491
title: Appendix C. Predator foraging behavior analysis and figure.

description: Predator foraging behavior analysis and figure.
DOI: 10.6084/m9.figshare.3556491.v1
title: Appendix C. Predator foraging behavior analysis and figure.

description: Predator foraging behavior analysis and figure.
DOI: 10.6084/m9.figshare.3556488
title: Appendix A. Detailed description of the experimental methods.

description: Detailed description of the experimental methods.
DOI: 10.6084/m9.figshare.3556488.v1
title: Appendix A. Detailed description of the experimental methods.

description: Detailed description of the experimental methods.
DOI: 10.6084/m9.figshare.3556485
title: Appendix B. Detailed description of biomass-corrected analyses and results.

description: Detailed description of biomass-corrected analyses and results.
DOI: 10.6084/m9.figshare.3556485.v1
title: Appendix B. Detailed description of biomass-corrected analyses and results.

description: Detailed description of biomass-corrected analyses and results.
DOI: 10.6084/m9.figshare.3556482
title: Appendix C. Average abundance–biomass relationships in different predator treatments.

description: Average abundance–biomass relationships in different predator treatments.
DOI: 10.6084/m9.figshare.3556482.v1
title: Appendix C. Average abundance–biomass relationships in different predator treatments.

description: Average abundance–biomass relationships in different predator treatments.
DOI: 10.6084/m9.figshare.3556479
title: Appendix D. Results of structural equation modeling indicating relationships among treatments and ecosystem variables.

description: Results of structural equation modeling indicating relationships among treatments and ecosystem variables.
DOI: 10.6084/m9.figshare.3556479.v1
title: Appendix D. Results of structural equation modeling indicating relationships among treatments and ecosystem variables.

description: Results of structural equation modeling indicating relationships among treatments and ecosystem variables.
DOI: 10.6084/m9.figshare.3556476
title: Supplement 1. Treatment means and standard errors for densities and biomass of community members at the end of the experiment, categorized by taxa.

description: File List species.csv (MD5: a18a08d0fa52e0e4ade0a906fe5058b2) Description The species.csv is a tab separated file. It contains the mean and standard error for the absolute density and dry biomass (in mg) of each animal taxa within ponds for a given predator size treatments. Column definitions Taxa (grouped by order and family) Mean densities for Control treatment Standard error of densities for Control treatment Mean densities for small Anax treatment Standard error of densities for small Anax treatment Mean densities for medium Anax treatment Standard error of densities for medium Anax treatment Mean densities for large Anax treatment Standard error of densities for large Anax treatment Mean biomass for Control treatment Standard error of biomass for Controltreatment Mean biomass for small Anax treatment Standard error of biomass for small Anax treatment Mean biomass for medium Anax treatment Standard error of biomass for medium Anax treatment Mean biomass for large Anax treatment Standard error of biomass for large Anax treatment Rows 89–96 provide additional information on individual taxa groups.
DOI: 10.6084/m9.figshare.3556476.v1
title: Supplement 1. Treatment means and standard errors for densities and biomass of community members at the end of the experiment, categorized by taxa.

description: File List species.csv (MD5: a18a08d0fa52e0e4ade0a906fe5058b2) Description The species.csv is a tab separated file. It contains the mean and standard error for the absolute density and dry biomass (in mg) of each animal taxa within ponds for a given predator size treatments. Column definitions Taxa (grouped by order and family) Mean densities for Control treatment Standard error of densities for Control treatment Mean densities for small Anax treatment Standard error of densities for small Anax treatment Mean densities for medium Anax treatment Standard error of densities for medium Anax treatment Mean densities for large Anax treatment Standard error of densities for large Anax treatment Mean biomass for Control treatment Standard error of biomass for Controltreatment Mean biomass for small Anax treatment Standard error of biomass for small Anax treatment Mean biomass for medium Anax treatment Standard error of biomass for medium Anax treatment Mean biomass for large Anax treatment Standard error of biomass for large Anax treatment Rows 89–96 provide additional information on individual taxa groups.
DOI: 10.6084/m9.figshare.3556473
title: Appendix A. Butterfly species categorized by habitat affinity.

description: Butterfly species categorized by habitat affinity.
DOI: 10.6084/m9.figshare.3556473.v1
title: Appendix A. Butterfly species categorized by habitat affinity.

description: Butterfly species categorized by habitat affinity.
DOI: 10.6084/m9.figshare.3556470
title: Appendix B. Mixed-effects model incorporating habitat affinity.

description: Mixed-effects model incorporating habitat affinity.
DOI: 10.6084/m9.figshare.3556470.v1
title: Appendix B. Mixed-effects model incorporating habitat affinity.

description: Mixed-effects model incorporating habitat affinity.
DOI: 10.6084/m9.figshare.3556467
title: Appendix C. Single-species model summary.

description: Single-species model summary.
DOI: 10.6084/m9.figshare.3556467.v1
title: Appendix C. Single-species model summary.

description: Single-species model summary.
DOI: 10.6084/m9.figshare.3556464
title: Appendix A. Response of functional groups to plant diversity.

description: Response of functional groups to plant diversity.
DOI: 10.6084/m9.figshare.3556464.v1
title: Appendix A. Response of functional groups to plant diversity.

description: Response of functional groups to plant diversity.