cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.52hkdn
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Primulina rotundifolia (Hemsl.) Mich.Möller & A.Weber)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000226-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ndkegq
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amphibia)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-74.8265154704006 7.1857035356908,-74.676588991389 7.1857035356908,-74.676588991389 7.34917781746346,-74.8265154704006 7.34917781746346,-74.8265154704006 7.1857035356908))"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000227-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/0knnds
title: submit_ABC.sh

description: The bash script used to run Main.R on the HPC cluster.
DOI: 10.57745/jdbacz
title: Output_Analysis_ABC_SMC.Rmd

description: RMarkdown used to run the overall analyses and producing plots after running the ABC-SMC for each of the 63 flocks.
DOI: 10.57745/lpmdjm
title: DistributionFunctions.R

description: The R script used to source functions `qdistr`, `ddistr` and `rdistr` (quantile function, density function, and random deviates generator, respectively).
DOI: 10.57745/ni1rgf
title: ImplementABC_SMC.R

description: The R script used within HPAI_MortalityData.Rmd to perform the ABC-SMC algorithm using the R package `EasyABC` (https://cran.r-project.org/package=EasyABC).
DOI: 10.57745/pie0ex
title: ABC-SMC_MortalityData.Rmd

description: The R Markdown document used to perform ABC-SMC for each flock independently. Outputs and figures were saved in the Output folder.
DOI: 10.57745/trxvlg
title: ABC-rej_MortalityData.Rmd

description: The R Markdown document used to perform ABC rejection for each flock independently using the R package `abc` (https://cran.r-project.org/package=abc). Outputs and figures were saved in the Output folder.
DOI: 10.57745/ue2kkq
title: Main.R

description: The R script used to render HPAI_MortalityData.Rmd on the HPC cluster.
DOI: 10.57745/xntgdb
title: design.rds

description: The output of Design.R, i.e. a list of class "`fast99`".
DOI: 10.57745/z0iw0p
title: HPAI_MortalityData.Rproj

description: R Project for using the scripts in RStudio
DOI: 10.57745/12vusc
title: README.md

description: README file for the ABC-rejection/3_Analyses folder
DOI: 10.57745/6nxoqm
title: Convergence.R

description: The R script used to produce the model simulations given the parameter sets contained in theta.txt. Model outputs were saved in the Output folder.
DOI: 10.57745/e2cfgk
title: Simul.R

description: The R script used to produce the model simulations given the parameter sets contained in lhs.RDS. Model outputs were saved in the Output1/2/3 folders.
DOI: 10.57745/gm1k1u
title: README.md

description: README file for the ABC-SMC folder
DOI: 10.57745/ktpzmz
title: mortality-data-record.tab

description: This file contains the daily mortality data recorded for the 63 flocks included in the study. Variables are:
- Indentification of the flock (ID)
- Day of recording (DAY)
- Age of the birds for each day (AGE)
- Number of birds that died each day (MORTALITY)
DOI: 10.57745/ri0uhc
title: ResultsABC_rej.R

description: The R script used within ABC-rej_MortalityData.Rmd to produce various plots describing the results from the ABC rejection.
DOI: 10.57745/vnslio
title: Sampling.R

description: The R script used to draw a Latin Hypercube sample using the `lhs` function in the R package `tgp`(https://cran.r-project.org/package=tgp).
DOI: 10.57745/vywhqf
title: Output_Analysis_ABC_rej.Rmd

description: RMarkdown used to run the overall analyses and producing plots after running the ABC rejection for each of the 63 flocks.
DOI: 10.57745/ygjivb
title: README.md

description: README file for the ABC-rejection/1_LHS folder
DOI: 10.57745/8x7cod
title: Aggregate.R

description: The R script used to re-unite all the simulation ouputs within a single object (results.RDS).
DOI: 10.57745/fxrvkh
title: RunSimulations.R

description: The R script used within ABC-rej_MortalityData.Rmd to produce posterior predictive checks by running the model, sampling parameter values from the joint posterior distributions.
DOI: 10.57745/ocju8v
title: README.md

description: Main README file for the overall folder
DOI: 10.57745/ps34h8
title: Design.R

description: The R script used to create the experimental design using the extended-FAST method in the R package `sensitivity` (https://cran.r-project.org/package=sensitivity)
DOI: 10.57745/r2sxun
title: mortality-data-flocks.tab

description: This file contains the characteristics of the 63 flocks included in the study. Variables are:
- Identification of the flock (ID)
- Epidemic year (YEAR)
- Country of origin (COUNTRY)
- Influenza virus subtype (SUBTYPE)
- Initial number of birds in the flock (SIZE)
- Host species (SPECIES)
- Production type (PRODUCTION)
DOI: 10.57745/sjrurs
title: README.md

description: README file for the ABC-rejection/2_Simul folder
DOI: 10.57745/vbfojq
title: submit.sh

description: The bash script used to run Simul.R on the HPC cluster.
DOI: 10.57745/xkbmlw
title: Main.R

description: The R script used to render ABC-rej_MortalityData.Rmd on the HPC cluster.
DOI: 10.57745/xx2do5
title: HowMany.R

description: The R script used to source functions `howmany` and `probabilities`, which were respectively used for random generation for multinomial distributions and for computing probabilities based on a set of transition rates. Both functions were used within `simulate_outbreak`.
DOI: 10.57745/zoyrcv
title: RunSimulations.R

description: The R script used within HPAI_MortalityData.Rmd to produce posterior predictive checks by running the model, sampling parameter values from the joint posterior distributions.
DOI: 10.57745/9xkgem
title: README.md

description: README file for the Priors folder
DOI: 10.57745/b8rxuo
title: submit.sh

description: The bash script used to run Convergence.R on the HPC cluster.
DOI: 10.57745/ca2mov
title: Sensitivity.R

description: The R script used to produce the model simulations given the parameter sets contained in design.rds. Model outputs were saved in the Output folder.
DOI: 10.57745/ffku79
title: GammaParmsFromQuantiles.R

description: The R script used to source function gamma.parms.from.quantiles, which was used to estimate parameters of Gamma distributions from quantiles. Downloaded from: http://www.medicine.mcgill.ca/epidemiology/Joseph/PBelisle/GammaParmsFromQuantiles.html
DOI: 10.57745/hk7q52
title: Priors.R

description: The R script used to estimate the prior distributions of the transmission rate, the infectious period and the case fatality risk, and to create figures representing the priors of all the parameters.
Figures were saved in the Figures folder.
DOI: 10.57745/ijfipo
title: README.md

description: README file for the Sensitivity folder
DOI: 10.57745/j14den
title: lhs.RDS

description: The output of Sampling.R, i.e. a Latin Hypercube sample.
DOI: 10.57745/mgcpsa
title: Analysis.R

description: The R script used to compute the coefficient of variation of the mean of each model output. Figures were saved in the Figures folder.
DOI: 10.57745/mirr5i
title: Analysis.R

description: The R script used to perform the sensitivity analysis of the model outputs to the varying input parameter values. Sensitivity analysis was performed using the R package `multisensi`
(https://cran.r-project.org/package=multisensi). Figures were saved in the Figures folder
DOI: 10.57745/nhenhq
title: README.md

description: README file for the Convergence folder
DOI: 10.57745/tn6p3l
title: theta.txt

description: Estimated parameter values from Vergne *et al.* (2021) *Transbound. Emerg. Dis.*, **68**(6), 3151-3155.
DOI: 10.57745/zb7c0s
title: ResultsABC_SMC.R

description: The R script used within HPAI_MortalityData.Rmd to produce various plots describing the results from the ABC-SMC.
DOI: 10.57745/08it7t
title: submit.sh

description: The bash script used to run Sensitivity.R on the HPC cluster.
DOI: 10.57745/aflh60
title: Parameters.tab

description: Parameter values of the time of first infection, the transmission rate, and the average durations of the latent and infectious periods for within-flock transmission of highly pathogenic avian influenza transmission, extracted from two systematic reviews: Kirkeby and Ward (2022)
*Transbound. Emerg. Dis.*, **69**(6), 3238-3246.
https://doi.org/10.1111/tbed.14675 and Lambert *et al.* (2023) *Vet. Res.*,
**54**(96), 1-23. https://doi.org/10.1186/s13567-023-01219-0.
Variables are:
- Ref: reference number
- Authors: name of the authors of the article from which parameter values were extracted
- Year: year of publication of the article from which parameter values were extracted
- Type: influenza virus subtype
- Pathogenicity: pathogenicity (high or low) of the influenza virus
- Country: country where the experiment or the epidemic took place
- Species: host species
- Unit : within-farm
- Study: type of study (field or experimental)
- Method: method used to estimate the parameters
- t0: estimated value of the time of first infection (point estimate)
- t0_95%CI/CrI: range of the 95% confidence or credible interval
- beta: estimated value of the transmission rate (point estimate)
- beta_95%CI/CrI: range of the 95% confidence or credible interval
- lat: estimated value of the average duration of the latent period (point estimate)
- lat_95%CI/CrI: range of the 95% confidence or credible interval
- inf: estimated value of the average value of the infectious period (point estimate)
- inf_95%CI/CrI: range of the 95% confidence or credible interval
DOI: 10.57745/cfgy0c
title: ComputePrior.R

description: The R script used to source function `compute_prior`, which returns the specifications (family, parameters) of the prior distribution of each parameter.
DOI: 10.57745/exnm2w
title: PlotDynsi.R

description: The R script used to source function `plot.dynsi`, derived from the homonym function in the R package `multisensi` (https://cran.r-project.org/package=multisensi).
DOI: 10.57745/nlcv6r
title: SimulateOutbreak.R

description: The R script used to source function `simulate_outbreak`, which performs the SEIR model simulations.
DOI: 10.57745/r06unb
title: ABC_Lenormand.R

description: The R script used to source function `.ABC_Lenormand`, derived from the homonym function in the R package `EasyABC` (https://cran.r-project.org/package=EasyABC). The difference is that the median absolute deviation of the summary statistics across the model simulations of the initial step is used to normalize the summary statistics before the computation of the Euclidean distance between simulations and data,instead of the standard deviation.
DOI: 10.57745/v6yhog
title: README.md

description: README file for the Functions folder
DOI: 10.57745/zaxpft
title: submit_ABC.sh

description: The bash script used to run Main.R on the HPC cluster.
DOI: 10.15468/dl.fezcyu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Primulina rubella L.H.Yang & M.Kang)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000228-241125135418005/datasets/export for details.
DOI: 10.23668/psycharchives.15209
title: Dataset for: Pummerer, Fock, Winter, & Sassenberg. Conspiracy Beliefs and Majority Influence. The Journal of Social Psychology.

description: Conspiracy beliefs (i.e., beliefs in specific conspiracy theories or the more general conspiracy mentality) are associated with a need for uniqueness and lower adherence to social norms. These findings suggest that conspiracy beliefs might be generally associated with less influence by majority opinions – absolutely and compared to minority opinions. In five experiments involving scenarios unrelated to conspiracy theories (overall N = 1669), participants were informed about the majority/minority opinion on a given issue (e.g., the building of a tunnel), afterwards indicating their evaluation or voting intentions regarding the issue. We then tested whether the influence of a majority/minority opinion on evaluation or voting intentions is moderated by conspiracy beliefs. Across studies, we find no significant moderation. A meta-analysis confirms no correlation between conspiracy beliefs and susceptibility to majority influence. Taken together, our studies provide no evidence for the assumption that those holding conspiracy beliefs reject majority opinions per se.
DOI: 10.15468/dl.gqmp9g
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Primulina rubribracteata Z.L.Ning & M.Kang)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000229-241125135418005/datasets/export for details.
DOI: 10.15468/dl.8v6xcr
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Plantae)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-74.8265154704006 7.1857035356908,-74.676588991389 7.1857035356908,-74.676588991389 7.34917781746346,-74.8265154704006 7.34917781746346,-74.8265154704006 7.1857035356908))"
 ]
}

 The dataset includes 16 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000230-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.23668/psycharchives.15213
title: COVID-19 Snapshot Monitoring (COSMO Germany) – Data of 69 surveys on pandemic attitudes, feelings and behaviours

description: During a pandemic, knowledge, risk perceptions, trust in institutions and attitudes towards public health measures influence protective behaviours and mental health. The COVID-19 Snapshot Monitoring (COSMO) project collected psychosocial data on pandemic-related attitudes, feelings and behaviours from representative samples in Germany. In sixty-nine cross-sectional online surveys conducted between 03.03.2020 and 08.11.2022, N = 69,013 individuals were assessed. Our 332 variables show how COVID-19 was perceived (e.g., symptoms, risk perceptions), which behaviours were exhibited (e.g., mask wearing, keeping distance, being vaccinated, meeting other people), what attitudes and beliefs people held (e.g., towards vaccination, conspiracy beliefs, pandemic fatigue), which information sources they used and trusted, how their mental health was affected (e.g., worries, wellbeing, resilience) and what consequences the pandemic had for people (e.g., financial losses, alcohol consumption). Variables are available for at least five waves (i.e., roughly 5,000 participants, some for all waves). The data allow us to trace population-level changes in pandemic perceptions and actions, assess the relationships between determinants and behaviours, and help prepare for future crises.
description: data_COSMO.xlsx, data_COSMO.csv - Data set for all regularly collected variables within the COVID-19 Snapshot Monitoring (collected during 5 waves or more), codebook_COSMO.xlsx, codebook_COSMO.csv, codebook_COSMO.numbers - Codebook for all variables in the data set, including german and english instructions, questions and answer options
DOI: 10.15468/dl.raqdtd
title: Occurrence Download

description: A dataset containing 3127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 410.0-1000000.0",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bombus Latreille, 1802",
 "Year 2014-2024"
 ]
}

 The dataset includes 3127 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000231-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2r4bff
title: Occurrence Download

description: A dataset containing 122918 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "PublishingOrg is 66522820-055c-11d8-b84e-b8a03c50a862"
 ]
}

 The dataset includes 122918 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000201-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sxze3y
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Primulina rufipes Y.L.Su, P.Yang & Yan Liu)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000232-241125135418005/datasets/export for details.
DOI: 10.15468/dl.h7p7wk
title: Occurrence Download

description: A dataset containing 554 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((-96.03578 24.19537,-60.99047 24.19537,-60.99047 48.38978,-96.03578 48.38978,-96.03578 24.19537))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ctenoplusia oxygramma (Hampson, 1892)"
 ]
}

 The dataset includes 554 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000233-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.23668/psycharchives.15234
title: Dataset for: The Hidden Influencers: Unraveling the Impact of Irrelevant Features on Action Control Mechanisms

description: Nicolas D. Münster, Philip Schmalbrock, & Christian Frings (2024). The Hidden Influencers: Unraveling the Impact of Irrelevant Features on Action Control Mechanisms
DOI: 10.15468/dl.bweu23
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Primulina sclerophylla (W.T.Wang) YanLiu)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000234-241125135418005/datasets/export for details.
DOI: 10.23668/psycharchives.15235
title: Dataset for: The treatment effect in randomized control Trials (RCTs) of pharmacological treatments (Selective Serotonin Reuptake Inhibitors (SSRIs)) for patients with posttraumatic stress disorder

description: Standardized CAMA dataset based on: The treatment effect in randomized control Trials (RCTs) of pharmacological treatments (Selective Serotonin Reuptake Inhibitors (SSRIs)) for patients with posttraumatic stress disorder
DOI: 10.6084/m9.figshare.27902100
title: Characteristics of indices applied to measuring the digital economy

description: Characteristics of indices applied to measuring the digital economy
DOI: 10.23668/psycharchives.15237
title: Fine coding dataset and manual for: Emotional Intelligence Trainings for University Students: a Systematic Review on Models, Content, and Measures

description: This supplementary material contains fine coding dataset and coding manual for: Asiedu, A., Emslander, V., Müller-Kreiner, C., Seidel., T., Holzberger, D. Emotional Intelligence Trainings for University Students: a Systematic Review on Models, Content, and Measures
DOI: 10.23668/psycharchives.15241
title: Dataset for Evaluating the Construct Validity of the PSS-10: Findings from a Non-Clinical Sample of Finnish Young Adults

description: Dataset contains entries of 1029 Finnish respondents to PSS-10.
DOI: 10.15468/dl.c8dqcw
title: Occurrence Download

description: A dataset containing 68440 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-188.40307 19.02065,-28.59693 19.02065,-28.59693 82.97935,-188.40307 82.97935,-188.40307 19.02065))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Picoides dorsalis S.F.Baird, 1858"
 ]
}

 The dataset includes 68440 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000235-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.23668/psycharchives.15245
title: Raw dataset "Smart heating adoption"

description: Uncleaned, raw dataset for Paper "Smart, not social: Acceptance of smart heating technology is a matter of individual beliefs", assessing motivators and barriers for smart heating technology adoption.
DOI: 10.15468/dl.ahca65
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Primulina scutellifolia Luu, N.L.Vu & T.Q.T.Nguyen)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000237-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7sesbj
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Edraianthus graminifolius (L.) A.DC.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 42 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000238-241125135418005/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.