cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1294455.08fu
title: SH1294455.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1294456.08fu
title: SH1294456.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1294457.08fu
title: SH1294457.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1294458.08fu
title: SH1294458.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1294459.08fu
title: SH1294459.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.48370/ofd/ux14ly/392eki
title: m-1865.tif

description: :unav
DOI: 10.34808/vfbw-je98
title: Polyp of corpus uteri - Female, 49 - Tissue image [10080730015785221]

description: This is the histopathological image of CORPUS UTERI tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 49Clinical description: Suspicion of endemetrial hyperplasiaGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XIV - Diseases of the genitourinary systemDiagnosis: Polyp of corpus uteriResult of the histopathological examination: Perimenopausal endometrium, blood clots and fragments of endometrial polyp.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: CORPUS UTERITissue: EndometriumType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/gnszzv
title: Myodes glareolus - 26778, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1961-12-18, in: Białowieża National Park, Poland. Material type:
DOI: 10.48370/ofd/ux14ly/omtxgz
title: FMW Bjerkandera adusta (Willdenow) P. Karsten M-1865.JPG

description: :unav
DOI: 10.34808/rtf1-2521
title: Lobular carcinoma, NOS - Female, 62 - Tissue image [10100730045405261]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 62Clinical description: 16 mm lesion of left breast on ultrasound.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: DUCTAL AND LOBULAR NEOPLASMSDiagnosis: Lobular carcinoma, NOSResult of the histopathological examination: Invasive lobular carcinoma of breast NHG2 (3+2+1: 0 mitoses per 10HPF). Lobular neoplasia. ER+, PR+, HER2-, Ki67 5%, e-cadherin-, p120 cytoplasmic reaction.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: Upper-outer quadrant of breastType of staining: positive/IHCStaining: Not applicableAntibody: E-CadherinTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/jaqn-x902
title: Burkitt's tumour - Female, 6 - Tissue image [1006073001561941]

description: This is the histopathological image of TONSIL tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 6Clinical description: Tumor of the right palatine tonsilGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter II - NeoplasmsDiagnosis: Burkitt's tumourResult of the histopathological examination: Tumor samples of the right palatine tonsil -  lymphoma with a high grade histological  malignancy, Burkitt's lymphoma.
Cyclin D1 (-)  negativeSample:Material: FFPECollecting method: Surgical specimenTopography: LIP, ORAL CAVITY AND PHARYNXOrgan: TONSILTissue: Palatine tonsilType of staining: positive/IHCStaining: Not applicableAntibody: Cyclin D1Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/ux14ly/ztbr4h
title: FMW Bjerkandera adusta (Willdenow) P. Karsten M-1865 (2).JPG

description: :unav
DOI: 10.48370/ofd/xq3u5t
title: Myodes glareolus - 71700, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-01-22, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/5ycg-xd59
title: Granulosa cell tumor, adult type - Female, 78 - Tissue image [11010630088578531]

description: This is the histopathological image of OVARY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 78Clinical description: No clinical data.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: SPECIALIZED GONADAL NEOPLASMSDiagnosis: Granulosa cell tumor, adult typeResult of the histopathological examination: Granulosa cell tumor of ovary, adult type: CKAE1/AE3+, EMA-, Inhibin+, Calretinin+, CD99+, Chromogranin-.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: OVARYTissue: OvaryType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/sf2v-zs33
title: Brenner tumor, NOS - Female, 55 - Tissue image [3150630013125761]

description: This is the histopathological image of OVARY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 55Clinical description: History of breast carcinoma. 67 x 46 mm tumor of right ovary on ultrasound.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: FIBROEPITHELIAL NEOPLASMSDiagnosis: Brenner tumor, NOSResult of the histopathological examination: Benign Brenner tumor of ovary.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: OVARYTissue: OvaryType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/ux14ly
title: Szaroporka podpalana (Bjerkandera adusta (Willdenow) P. Karsten), 1865

description: Grzyby makromycetes
DOI: 10.34808/ac8n-bn24
title: Adenoid cystic carcinoma - Female, 66 - Tissue image [4100730020136801]

description: This is the histopathological image of VULVA tissue sample obtained in University of Warmia and Mazury in Olsztyn and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 66Clinical description: Tumor of the vulva.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Adenoid cystic carcinomaResult of the histopathological examination: Adenoid cystic carcinoma of the vulva.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: VULVATissue: Labium majusType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: University of Warmia and Mazury in Olsztyn
DOI: 10.34808/qz43-y214
title: Chronic viral hepatitis B without delta-agent - Male, 42 - Tissue image [7220729599714041]

description: This is the histopathological image of LIVER AND INTRAHEPATIC BILE DUCTS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 42Clinical description: Chronic hepatitis BGender: MaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter I - Certain infectious and parasitic diseasesDiagnosis: Chronic viral hepatitis B without delta-agentResult of the histopathological examination: Chronic active hepatitis B  G2 (lobular and portal). Fe (-)Sample:Material: FFPECollecting method: Core-needle biopsyTopography: DIGESTIVE ORGANSOrgan: LIVER AND INTRAHEPATIC BILE DUCTSTissue: LiverType of staining: positive/HCStaining: Hale's colloidal ironAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/iborrq
title: Myodes glareolus - 530, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1952-12-16, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/6gc2-x005
title: Medullary thyroid carcinoma - Male, 70 - Tissue image [4120730022871571]

description: This is the histopathological image of THYROID GLAND tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 70Clinical description: Hyperthyroidism. Medullary thyroid carcinoma suspicion.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Medullary thyroid carcinomaResult of the histopathological examination: Medullary thyroid carcinoma. Calcitonin: positive cytoplasmic reaction in all tumor cells.Sample:Material: FFPECollecting method: Surgical specimenTopography: THYROID AND OTHER ENDOCRINE GLANDSOrgan: THYROID GLANDTissue: Thyroid, NOSType of staining: positive/IHCStaining: Not applicableAntibody: CalcitoninTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/2w5j-kh32
title: STOMACH, Stomach, NOS - Male, 75 - Tissue image [9180729562251271]

description: This is the histopathological image of STOMACH tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 75Clinical description: Stomach carcinoma - unaffected stomach wall - random samplesGender: MaleDiagnosis:Classification: HealthyClassification code: Diagnosis: Result of the histopathological examination: Stomach wall with normal histological structure.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: STOMACHTissue: Stomach, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/wn061f
title: Myodes glareolus - 19195, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1957-10-19, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/9z7w-sx30
title: Other and unspecified cirrhosis of liver - Female, 53 - Tissue image [5150730018701111]

description: This is the histopathological image of LIVER AND INTRAHEPATIC BILE DUCTS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 53Clinical description: Ascites.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XI - Diseases of the digestive systemDiagnosis: Other and unspecified cirrhosis of liverResult of the histopathological examination: Micronodular cirrhosis and steatosis of the liver.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: LIVER AND INTRAHEPATIC BILE DUCTSTissue: LiverType of staining: positive/HEStaining: Hematoxylin & eosinAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/yk6n-d848
title: Neurofibroma, NOS - Female, 73 - Tissue image [6060730012996131]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 73Clinical description: Suspicion of basal cell carcinoma.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: NERVE SHEATH TUMORSDiagnosis: Neurofibroma, NOSResult of the histopathological examination: Neurofibroma- proliferation of elengated cells with wavy darkly stained nuclei. Mast cells are present.  Collagen bundles in background. Radical excision. S100+, SOX10+.Sample:Material: FFPECollecting method: Excision of lesionsTopography: SKINOrgan: SKINTissue: Skin of chestType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/hfhq-0s54
title: Spontaneous abortion - Female, 28 - Tissue image [4050730010683541]

description: This is the histopathological image of PLACENTA tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 28Clinical description: Pregnancy III, 12 weeks, miscarriage.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XV - Pregnancy, childbirth and the puerperiumDiagnosis: Spontaneous abortionResult of the histopathological examination: Fetal membranes and placenta in a state of diffuse purulent inflammation.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: PLACENTATissue: PlacentaType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/drbtqe
title: Myodes glareolus - 15380, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-10-21, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/weq8-5s84
title: Chronic tonsillitis - Male, 69 - Tissue image [9230729557253781]

description: This is the histopathological image of TONSIL tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 69Clinical description: No clinical data.Gender: MaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter X - Diseases of the respiratory systemDiagnosis: Chronic tonsillitisResult of the histopathological examination: Chronic tonsillitis with Actinomyces.Sample:Material: FFPECollecting method: Excision of lesionsTopography: LIP, ORAL CAVITY AND PHARYNXOrgan: TONSILTissue: Palatine tonsilType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/xskv-6263
title: Clear cell adenocarcinoma, NOS - Female, 55 - Tissue image [10040729541208691]

description: This is the histopathological image of OVARY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 55Clinical description: 12 cm solid and cystic tumor of left ovary on ultrasound.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Clear cell adenocarcinoma, NOSResult of the histopathological examination: Clear cell carcinoma (G3) of ovary:  EMA+, PAX8+, VIM+, CAM5.2+, ER focally+, p53 focally+, CK7 singular cells+, CK20-, AFP-, WT1-, CK5/6-, RCC-, CD10-, Ki-67 60%Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: OVARYTissue: OvaryType of staining: positive/IHCStaining: Not applicableAntibody: Epithelial MembraneTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/keqs-js05
title: Sinus, fistula and cyst of branchial cleft - Male, 27 - Tissue image [7110729594547301]

description: This is the histopathological image of OTHER AND ILL-DEFINED SITES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 27Clinical description: Tumor of neck, diameter 3 cm.Gender: MaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XVII - Congenital malformations, deformations and chromosomal abnormalitiesDiagnosis: Sinus, fistula and cyst of branchial cleftResult of the histopathological examination: Branchial cleft cyst: cyst lined by stratified squamous epithelium. Under epithelium lymphoid tissue with germinal centres is present.Sample:Material: FFPECollecting method: Excision of lesionsTopography: OTHER AND ILL-DEFINED SITESOrgan: OTHER AND ILL-DEFINED SITESTissue: Head, face or neck, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk