cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/09a1f2cc150b547e3c9b20c39e10cfc2
title: Chlorophyll and phaeopigments from water column samples, collected at selected depths at Palmer Station Antarctica, during the Palmer LTER field seasons, 1991 – 2019.

description: Phytoplankton chlorophyll sampling was led by Smith from the 1991-1992 season through the 2001-2002 season, and then by Vernet from the 2002-2003 season through the 2006-2007 season. Schofield is the third, and current lead, beginning in the 2008-2009 season. Methods have been kept consistent as much as possible over the full time series and different Principal Investigators. Chlorophyll a (Chl a) is the principal photosynthetic pigment of phytoplankton, and is used as a proxy measurement for estimating phytoplankton biomass in water samples. Chl a concentrations reflect the distribution of active phytoplankton spatially and with depth in the water column and their changes over time. Phaeopigments are non-photosynthetic pigments that are degradation products of phytoplankton chlorophylls which form during and after phytoplankton blooms. Water samples are collected throughout the water column at stations within the Palmer LTER region (primarily B and E, to 50m and 65m respectively). Water samples are filtered onto GF/F filters, and filters kept frozen at -80°C until analysis. Fluorometric chlorophyll and phaeopigment analysis is conducted at Palmer Station through acetone extraction of the GF/F filters and measurement of the extract on a Turner 10AU Fluorometer. The primary source of error for phaeopigment measurement is Chlorophyll b. If high amounts of Chlorophyll b are present in the sample, phaeopigments may be overestimated.
DOI: 10.6073/pasta/6bbce1e3264571463c0354874dba88cf
title: Chlorophyll and phaeopigments from water column samples, collected at selected depths aboard Palmer LTER annual cruises off the coast of the Western Antarctic Peninsula, 1991 – 2019.

description: Phytoplankton chlorophyll sampling was led by Smith from 1991-2002, and then by Vernet from 2003-2008. Schofield is the third, and current lead, beginning in 2009. Methods have been kept consistent as much as possible over the full time series and different Principal Investigators. Chlorophyll a (Chl a) is the principal photosynthetic pigment of phytoplankton, and is used as a proxy measurement for estimating phytoplankton biomass in water samples. Chl a concentrations reflect the distribution of active phytoplankton spatially and with depth in the water column and their changes over time. Phaeopigments are non-photosynthetic pigments that are degradation products of phytoplankton chlorophylls which form during and after phytoplankton blooms. Water samples are collected throughout the water column along the Western Antarctic Peninsula at regular LTER grid stations where CTD casts are preformed and in surface waters at underway stations, where CTD casts are not done, using the ship’s flow-through seawater system. Water samples are filtered onto GF/F filters, and filters kept frozen at -80°C until analysis at Palmer Station following the completion of the cruise. Fluorometric chlorophyll and phaeopigment analysis is conducted at Palmer Station through acetone extraction of the GF/F filters and measurement of the extract on a Turner 10AU Fluorometer. The primary source of error for phaeopigment measurement is Chlorophyll b. If high amounts of Chlorophyll b are present in the sample, phaeopigments may be overestimated.
DOI: 10.5281/zenodo.4447174
title: Mitata at Psiloritis UNESCO Global Geopark

description: Shepherd settlements ('Mitato', plural 'Mitata') at the Psiloritis UNESCO Global GeoPark, Greece. These settlements were used for the seasonal droving of livestock along migratory routes and were made using The art of dry stone walling. The dataset contains the 3D model and a video rendering of the model. GPS Location: (35.2187652, 24.8740329) Relevant UNESCO inscriptions: Transhumance, the seasonal droving of livestock along migratory routes in the Mediterranean and in the Alps 14.COM 10.b.2 Art of dry stone walling, knowledge and techniques 13.COM 10.b.10
DOI: 10.5441/002/edbt.2017.75
title: SIMDMS: Data Management and Analysis to Support Decision Making through Large Simulation Ensembles
DOI: 10.5281/zenodo.6416043
title: Dataset for "Automated Identification of Uniqueness in JUnit Tests"

description: Dataset for "Automated Identification of Uniqueness in JUnit Tests" Author: Jianwei Wu, James Clause Please contact at wjwcis@udel.edu for any questions.
DOI: 10.17188/1281794
title: Materials Data on PbO by Materials Project

description: PbO is lead oxide-like structured and crystallizes in the orthorhombic Pbcm space group. The structure is two-dimensional and consists of one PbO sheet oriented in the (1, 0, 0) direction. there are five inequivalent Pb2+ sites. In the first Pb2+ site, Pb2+ is bonded in a 4-coordinate geometry to four O2- atoms. There are a spread of Pb–O bond distances ranging from 2.34–2.37 Å. In the second Pb2+ site, Pb2+ is bonded in a 4-coordinate geometry to four O2- atoms. There are a spread of Pb–O bond distances ranging from 2.34–2.37 Å. In the third Pb2+ site, Pb2+ is bonded in a 4-coordinate geometry to four O2- atoms. There are a spread of Pb–O bond distances ranging from 2.33–2.38 Å. In the fourth Pb2+ site, Pb2+ is bonded in a 4-coordinate geometry to four equivalent O2- atoms. There are two shorter (2.34 Å) and two longer (2.37 Å) Pb–O bond lengths. In the fifth Pb2+ site, Pb2+ is bonded in a 4-coordinate geometry to four equivalent O2- atoms. There are two shorter (2.33 Å) and two longer (2.38 Å) Pb–O bond lengths. There are four inequivalent O2- sites. In the first O2- site, O2- is bonded to four Pb2+ atoms to form a mixture of edge and corner-sharing OPb4 tetrahedra. In the second O2- site, O2- is bonded to four Pb2+ atoms to form a mixture of edge and corner-sharing OPb4 tetrahedra. In the third O2- site, O2- is bonded to four Pb2+ atoms to form a mixture of edge and corner-sharing OPb4 tetrahedra. In the fourth O2- site, O2- is bonded to four Pb2+ atoms to form a mixture of edge and corner-sharing OPb4 tetrahedra.
DOI: 10.5281/zenodo.4157615
title: Hyperspectral X-ray CT data set of mineralised ore sample with Au and Pb deposits

description: <strong>General data description:</strong> This is a hyperspectral (energy-resolved) X-ray CT projection data set of a mineralised ore sample with small gold and galena deposits. It was acquired in a laboratory micro-CT scanner with an energy-sensitive HEXITEC detector in the Henry Moseley X-ray Imaging Facility at The University of Manchester. The data included contains all the relevant files required for reconstruction, following a hyperspectral scan of a mineralised ore sample. The sample contains a number of mineral phases, of varying concentration, distributed throughout. Some phases (including gold, and lead-based Galena) produce unique absorption edges, which act as spectral identifiers that can be measured by an energy-sensitive detector. <strong>File descriptions:</strong> The data set consists of one .txt file and three .mat (MATLAB) data files. Au_rock_scan_geometry.txt gives a breakdown of the full sample and detector geometry used when acquiring the raw projections. The number of horizontal detector pixels accounts for the fact that a set of 5 tiled scans of the sample were collected and later stitched together. Au_rock_sinogram_full.mat contains the full 4D sinogram constructed following flat-field normalisation of the raw projection data. The data matrix contains the total number of energy channels acquired during scanning, as well as the conventional elements of vertical/horizontal detector pixel number and total projection angles. commonX.mat provides a direct conversion between the energy channels, and the energies (in keV) that they correspond to, following a calibration procedure prior to scanning. FF.mat contains the 4D flatfield data acquired when no sample was present. This data was used to normalise the projection datasets, as the sinogram was constructed.
DOI: 10.5281/zenodo.5732299
title: Bash in the Wild: Language Usage, Code Smells, and Bugs - Dataset

description: This is the data set for the paper "Bash in the Wild: Language Usage, Code Smells, and Bugs".
DOI: 10.5281/zenodo.4294326
title: Database of Last Interglacial Sea-level Proxies in and around Japan

description: This spreadsheet is a record of the relative sea-level proxies in and around Japan. It has been exported from "The World Atlas of Last Interglacial Shorelines (WALIS) database (https://warmcoasts.eu/world-atlas.html).
DOI: 10.6084/m9.figshare.21324339
title: Supplementary Material for: Activated Platelet Rich Plasma versus Non-Activated Platelet Rich Plasma in the Treatment of Alopecia Areata

description: <b><i>Introduction:</i></b> Alopecia areata is a common recurrent T cell-mediated autoimmune-induced non-scarring hair loss with not fully understood pathogenesis. It affects nearly 2% of the general population during lifetime. The course of the disease is unpredictable, and currently no treatment is available for complete cure or prevention. Platelet rich plasma (PRP) is an autologous blood-derived product, which has widely spread in the last decades for treatment of different dermatological conditions including hair disorders. <b><i>Methods:</i></b> The aim of this work was to evaluate the efficacy and safety of activated PRP in comparison to non-activated PRP in the treatment of alopecia areata. This study was conducted on two groups of 20 subjects each who received 4 treatments of intradermal injection of activated and non-activated PRP. <b><i>Results and Conclusion:</i></b> Data obtained in our research confirm that PRP is safe, effective, and well tolerated by patients as a treatment modality for alopecia areata. Besides, such a method is cost-effective as there is no need for any expensive tools for preparation and it can be done in outpatient clinics. Also, activation of PRP prior to injection is not mandatory as there was no statistically significant difference between both groups.
DOI: 10.6084/m9.figshare.21406773
title: Supplementary Material for: Efficacy of an Introductory Nail Disorder Learning Module to Supplement the Medical School Curriculum: Experience from One United States Medical School

description: <b><i>Introduction:</i></b> Dermatologic and systemic conditions affecting nails are common, but nail pathology education in medical school curricula is limited. We created and evaluated the efficacy of a case-based module on nail pathologies in a medical student cohort from one well-respected US medical school. <b><i>Methods:</i></b> We developed a module consisting of five cases: melanonychia, onychomycosis, nail psoriasis, Beau’s lines/onychomadesis, and apparent leukonychia. Participants completed a pre-module questionnaire prior to completing the module and another questionnaire directly following completion. <b><i>Results:</i></b> Sixty-two clinical medical students completed the pre-module questionnaire, the module, and the post-module questionnaire. 59.68% of participants reported they had evaluated 1–5 patients with nail findings. However, 43.55% of study participants denied receiving any lectures on nail pathologies in their medical education. On average, the module took 13.73 min to complete. Student-reported confidence in both identifying and treating common nail disorders significantly increased from to pre- to post-module responses for both identification (<i>p</i> &lt; 0.001) and treatment (<i>p</i> &lt; 0.001) of common nail pathologies. <b><i>Discussion/Conclusion:</i></b> Nail findings are prevalent in all medical specialties, and improved medical student education on nail pathologies is necessary. Our introductory, case-based module on pathologies is an effective way to improve student confidence in identifying and treating nail disorders.
DOI: 10.6084/m9.figshare.21805032
title: Supplementary Material for: Radiological Disease Activity in Secondary Progressive Multiple Sclerosis

description: <b><i>Introduction:</i></b> MRI activity is less frequent among secondary progressive multiple sclerosis (SPMS) patients. In the current study, we aimed to identify SPMS patients with higher radiological disease activity (RDA) and determine their clinical characteristics. <b><i>Methods:</i></b> We evaluated the occurrence of RDA in SPMS patients followed at the Sheba Multiple Sclerosis Center between January 1, 2015, and December 31, 2020. All patients underwent brain and spinal cord MRI examinations as a routine follow-up unrelated to clinical disease activity. Patients were subdivided into RDA and non-RDA MRI groups based on the presence of active gadolinium-enhancing T1 lesions and/or new/enlarging T2 lesions. Demographic variables and disease-related data were compared. <b><i>Results:</i></b> One hundred consecutive SPMS patients, 74 females, median age of 50 years, disease duration of 19.5 years, and neurological disability by the Expanded Disability Status Scale (EDSS) score of 6.0, were included in the study. The RDA group comprised 35 patients (35%), of them 65.7% (<i>n</i> = 23) exhibited only brain MRI activity, 22.8% (<i>n</i> = 8) only spinal cord MRI activity, and 11.4% (<i>n</i> = 4) had both. Patients in the RDA group were diagnosed at a younger mean (SD) age of 28.2 (8.9) versus 33.7 (10.1) years and were younger with a mean (SD) age of 47.8 (9.9) versus 53.4 (10.1) years, as compared with the non-RDA group. No significant differences were found in relation to disease duration, EDSS, exposure to immunomodulatory treatments, and duration of immunomodulatory treatments. <b><i>Conclusions:</i></b> RDA unrelated to clinical symptomatology was more frequent in a subgroup of young SPMS patients.
DOI: 10.6084/m9.figshare.21803091
title: Supplementary Material for: A Case of Foldable Artificial Iris Implantation for Treatment of Postcataract Surgery Aniridia

description: We report an approach for managing acquired aniridia induced by intraoperative floppy iris syndrome (IFIS) during cataract surgery. An 81-year-old man with right blurred vision and photophobia symptoms was treated for extensive iris defects due to cataract surgery aniridia. The retained iris for the patient was observed at the 5–10 o’clock position, with the intraocular lens (IOL) inside the capsular bag. Although the aniridia symptoms were successfully addressed by the implantation of a foldable artificial iris (Iris Prosthesis: Ophtec [formerly Reper], Groningen, the Netherlands), the procedure subsequently caused endothelial damage. In summary, while the utilization of the foldable artificial iris can improve aniridia symptoms, further advances in the insertion technique are required.
DOI: 10.5281/zenodo.7038942
title: Data set of 1D model runs, CTRL and ICE runs, associated with "Underestimation of oceanic carbon uptake in the Arctic Ocean: Ice melt as predictor of the sea ice carbon pump"

description: Dataset of one-dimensional runs for investigation on the sea ice carbon pump. Associated with Sect. 3.1 and 4.1 of manuscript "Underestimation of oceanic carbon uptake in the Arctic Ocean: Ice melt as predictor of the sea ice carbon pump".
DOI: 10.5281/zenodo.6536446
title: Dataset of antiarch placoderms (the most basal jawed vertebrates) throughout Middle Paleozoic

description: This dataset is derived from the DeepBone database (www.deepbone.org), which is constructed with the support of "Big Earth Data Science Engineering (CASEarth)" in the Strategic Priority Research Program. Because no automatic method could extract the paleontological data from literature reliably, we invited researchers and students to contribute data in their research fields. This dataset, which was extracted manually from 126 published papers or books from 1939 to 2021, consists of 64 genera and 6025 records, covering all antiarch lineages. We transferred the unstructured data from the literature to structured data for further research as detailed as possible. The 6025 records include 5867 fossil specimens that had been systematically described and documented, and 158 virtual specimens, which were introduced to describe the taxon information when no specimen was assigned for the referred records. Each record has at least one reference within our dataset. This is the most comprehensive dataset of Antiarcha up to now.
DOI: 10.5281/zenodo.5639529
title: Dataset of antiarch placoderms (the most basal jawed vertebrates) throughout Middle Paleozoic

description: This dataset is derived from the DeepBone database (www.deepbone.org), which is constructed with the support of "Big Earth Data Science Engineering (CASEarth)" in the Strategic Priority Research Program. Because no automatic method could extract the paleontological data from literature reliably, we invited researchers and students to contribute data in their research fields. This dataset, which was extracted manually from 126 published papers or books from 1939 to 2021, consists of 64 genera and 6025 records, covering all antiarch lineages. We transferred the unstructured data from the literature to structured data for further research as detailed as possible. The 6025 records include 5867 fossil specimens that had been systematically described and documented, and 158 virtual specimens, which were introduced to describe the taxon information when no specimen was assigned for the referred records. Each record has at least one reference within our dataset. This is the most comprehensive dataset of Antiarcha up to now.
DOI: 10.21227/28ha-8921
title: Miniature Mobile Robot Detection using an Ultra-Low Resolution Time-of-Flight Sensor

description: Miniature mobile robots in multi-robotic systems require robust environmental perception for successful navigation, especially when operating in real-world environments. One of the sensors that have recently become accessible for miniature mobile robots due to their size and cost-effectiveness is a multi-zone time-of-flight (ToF) sensor. The object of classification in the dataset is a miniature mobile robot on a sand-like terrain with rocks. The dataset was acquired with the ST VL53L5CX ToF sensor.
DOI: 10.15159/phytop.95
title: Small lakes 2002

description: Methods of phytoplankton processing. Samples were preserved with Lugol’s (acidified iodine) solution and processed using the Utermöhl (1958) method. Phytoplankton biomass was calculated from counts of cells or colonies using a Nikon Eclipse Ti-S inverted microscope at x200 and x400 magnification. Preserved sample (3 ml) was settled overnight. Identification and measurements took place in the course of counting. Counting units are independent (single) algal cells, colonies or filaments/trichomes. Biovolumes of algal cells, colonies and/or filaments were calculated using assigned geometric shapes dimensions, and converted to biomass assuming the specific density of 1 g cm-3 in accordance with Edler (1979). References of methods accepted Approved by CEN on 14 July 2006 “Water quality - Guidance standard on the enumeration of phytoplankton using inverted microscopy (Utermöhl technique)” (CEN 15204, 2006) European Standard EN 15204:2006 Edler, L. (ed.) 1979. Recommendations on methods for marine biological studies in the Baltic Sea. Phytoplankton and chlorophyll. – BMB WG 9. Utermöhl, H., (1958). Zur Vervollkommnung der quantitativen Phytoplankton-Methodik. Mitteilungen der Internationale Vereinigung für Theoretische und Angewandte Limnologie 9: 1-38. Biovolume calculation for pelagic and benthic microalgae | Request PDF. Available from: https://www.researchgate.net/publication/220031275_Biovolume_calculation_for_pelagic_and_benthic_microalgae [accessed Oct 29 2018]. The most commonly used traditional biomass estimate for microalgae is cell biovolume, which is calculated from microscopically measured linear dimensions (Steinman et al. 1991, Snoeijs 1994, Sommer 1994, 1995, Hillebrand and Sommer 1997). Huber-Pestalozzi, G., Komarek, J., Fott, B. 1983. Das Phytoplankton des Süsswassers. 7(1). Chlorophyceae. Chlorococcales. Stuttgart. 1044. S. Komarek, J., Anagnostidis, K. 1999. Süsswasserflora von Mitteleuropa. 19/1. Cyanoprocaryota. 1. Chroococcales. Elsevier Spectrum Academischer Verlag. Heidelberg. Berlin. 548 S. Komarek, J., Anagnostidis, K. 2005. Süsswasserflora von Mitteleuropa. 19/2. Cyanoprocaryota. 2. Oscillatoriales. Elsevier Spectrum Academischer Verlag. 759 S. Komárek, J., 2013. Cyanoprokaryota 3. Teil: Heterocystous Genera. Süsswasserflora von Mitteleuropa. B. 19/3. Springer Spektrum. 1130 S. Krammer, K., Lange-Bertalot, H. 1997-1991. Süsswasserflora von Mitteleuropa. Bacillariophyceae. B. 2, 1-4. Spectrum Academischer Verlag.Heidelberg. Berlin. Popovský, J., Pfiester, L.A. 2008. Dinophyceae (Dinoflagellida). Süsswasserflora von Mitteleuropa. B. 6. Springer Spektrum. 272 S. Косинская Е.К. 1960. Флора споровых растений СССР. Том 5. Конъюгаты и Сцеплянки. (2). Изд. АН СССР. Москва-Ленинград. 706 стр. In Russian.
DOI: 10.34740/kaggle/dsv/4806503
title: Elon Musk Tweets
DOI: 10.25747/ww6g-9s47
title: ISAD(G) Descriptions of Archival Records With Entity Annotation
DOI: 10.6084/m9.figshare.21812355.v1
title: Assessment of the impact of intravenous antibiotics treatment on gut microbiota in patients: Clinical data from preand post-cardiac surgery

description: 424 samples
DOI: 10.6084/m9.figshare.21812355
title: Assessment of the impact of intravenous antibiotics treatment on gut microbiota in patients: Clinical data from preand post-cardiac surgery

description: 424 samples
DOI: 10.20372/eiar-rdm/n6jdbv/aztiwo
title: 142888-Article Text-379727-1-10-20160826 (1).pdf

description: :unav
DOI: 10.20372/eiar-rdm/n6jdbv
title: Diversity Analysis of Ethiopian Mustard Breeding Lines Using RAPD Markers

description: Ethiopian mustard (Brassica carinata A. Braun) is an oilseed crop less known to the other parts of the world. Utilization of the available germplasm of B. carinata for different breeding purposes requires information on genetic diversity. Random amplified polymorphic DNA (RAPD) was employed to characterize the genetic diversity of 22 B. carinata inbred lines derived from accessions collected from eight different geographic areas in Ethiopia and one from Sweden. Forty-three primers were used for amplification. The resulting RAPD pattern was analysed with respect to size and distribution of fragments, reproducibility, genetic diversity and informativeness of the marker for genotype specific amplification. In total, 371 bands were amplified of which 239 (65%) were polymorphic. Band size ranged from 300 to 4000 kb. The number of bands generated by each primer varied from 3 to 15 with an average of 8.6, while number of polymorphic bands varied from 1 to 12 with an average of 5.6. RAPD patterns were reliably reproducible between replicates. Genetic similarity (GS) calculated from the marker data using Jaccard`s similarity coefficient (JCS) ranged from 0.34 to 0.84. Using cluster analysis based on unweighted pair-group method with arithmetic average (UPGMA) and principal coordinate analysis (PCoA), the 21 Ethiopian inbred lines were grouped into three subgroups and the single genotype introduced from Sweden formed a separate group. The clustering pattern failed to show a clear correspondence between geographic and molecular diversities within the Ethiopian gene pool. Generally, RAPD differentiation was higher for the exotic genotype, thus formation of a gene pool distinct from the Ethiopian gene pool could be possible through introduction. Based on the genetic relatedness, selective parental combinations were earmarked as potential parents for the future breeding work. The RAPD assay generated genotype-specific products in 14 of the genotypes studied which could be used as DNA fingerprint for variety identification.
DOI: 10.20372/eiar-rdm/v5t3tb/623icf
title: 192011-Article Text-486946-1-10-20200102.pdf

description: :unav