cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21865506
title: Supplementary Material for: Urinary Biomarkers of Tubular Health and Risk for Kidney Function Decline or Mortality in Diabetes

description: Introduction: Diabetes is a leading cause of end-stage kidney disease (ESKD). Biomarkers of tubular health may prognosticate chronic kidney disease (CKD) progression beyond estimated glomerular filtration rate (eGFR) and urine albumin-to-creatinine ratio (UACR). Methods: We examined associations of five urinary biomarkers of tubular injury and repair (NGAL, KIM-1, IL-18, MCP-1, YKL-40) with kidney function decline (first occurrence of a decrease in eGFR≥30 ml/min/1.73 m2 if randomization eGFR≥60 or ≥50% if randomization eGFR&lt;60; ESKD) and all-cause mortality among 1,135 VA NEPHRON-D trial participants with baseline UACR ≥300 mg/g and available urine samples. Covariates included age, sex, race, BMI, systolic BP, HbA1c, treatment arm, eGFR, and UACR. In a subset of participants with 12-month samples (n=712), we evaluated associations of KIM-1, MCP-1, and YKL-40 change (from baseline to 12 months) with eGFR decline (from 12 months onwards). Results: At baseline, mean age was 65 years, mean eGFR was 56 ml/min/1.73 m2, and median UACR was 840 mg/g. Over a median of 2.2 years, 13% experienced kidney function decline and 9% died. In fully-adjusted models, the highest vs. lowest quartiles of MCP-1 and YKL-40 were associated with 2.18- and 1.76-fold higher risks of kidney function decline, respectively. One-year changes in KIM-1, MCP-1, and YKL-40 were not associated with subsequent eGFR decline. Higher baseline levels of NGAL, IL-18, MCP-1, and YKL-40 levels (per 2-fold higher) were independently associated with 10-40% higher risk of mortality. Discussion/Conclusion: Among Veterans with diabetes and CKD, urinary biomarkers of tubular health were associated with kidney function decline and mortality.
DOI: 10.6084/m9.figshare.21865506.v1
title: Supplementary Material for: Urinary Biomarkers of Tubular Health and Risk for Kidney Function Decline or Mortality in Diabetes

description: Introduction: Diabetes is a leading cause of end-stage kidney disease (ESKD). Biomarkers of tubular health may prognosticate chronic kidney disease (CKD) progression beyond estimated glomerular filtration rate (eGFR) and urine albumin-to-creatinine ratio (UACR). Methods: We examined associations of five urinary biomarkers of tubular injury and repair (NGAL, KIM-1, IL-18, MCP-1, YKL-40) with kidney function decline (first occurrence of a decrease in eGFR≥30 ml/min/1.73 m2 if randomization eGFR≥60 or ≥50% if randomization eGFR&lt;60; ESKD) and all-cause mortality among 1,135 VA NEPHRON-D trial participants with baseline UACR ≥300 mg/g and available urine samples. Covariates included age, sex, race, BMI, systolic BP, HbA1c, treatment arm, eGFR, and UACR. In a subset of participants with 12-month samples (n=712), we evaluated associations of KIM-1, MCP-1, and YKL-40 change (from baseline to 12 months) with eGFR decline (from 12 months onwards). Results: At baseline, mean age was 65 years, mean eGFR was 56 ml/min/1.73 m2, and median UACR was 840 mg/g. Over a median of 2.2 years, 13% experienced kidney function decline and 9% died. In fully-adjusted models, the highest vs. lowest quartiles of MCP-1 and YKL-40 were associated with 2.18- and 1.76-fold higher risks of kidney function decline, respectively. One-year changes in KIM-1, MCP-1, and YKL-40 were not associated with subsequent eGFR decline. Higher baseline levels of NGAL, IL-18, MCP-1, and YKL-40 levels (per 2-fold higher) were independently associated with 10-40% higher risk of mortality. Discussion/Conclusion: Among Veterans with diabetes and CKD, urinary biomarkers of tubular health were associated with kidney function decline and mortality.
DOI: 10.6084/m9.figshare.21865509
title: Supplementary Material for: Urinary Biomarkers of Tubular Health and Risk for Kidney Function Decline or Mortality in Diabetes

description: Introduction: Diabetes is a leading cause of end-stage kidney disease (ESKD). Biomarkers of tubular health may prognosticate chronic kidney disease (CKD) progression beyond estimated glomerular filtration rate (eGFR) and urine albumin-to-creatinine ratio (UACR). Methods: We examined associations of five urinary biomarkers of tubular injury and repair (NGAL, KIM-1, IL-18, MCP-1, YKL-40) with kidney function decline (first occurrence of a decrease in eGFR≥30 ml/min/1.73 m2 if randomization eGFR≥60 or ≥50% if randomization eGFR&lt;60; ESKD) and all-cause mortality among 1,135 VA NEPHRON-D trial participants with baseline UACR ≥300 mg/g and available urine samples. Covariates included age, sex, race, BMI, systolic BP, HbA1c, treatment arm, eGFR, and UACR. In a subset of participants with 12-month samples (n=712), we evaluated associations of KIM-1, MCP-1, and YKL-40 change (from baseline to 12 months) with eGFR decline (from 12 months onwards). Results: At baseline, mean age was 65 years, mean eGFR was 56 ml/min/1.73 m2, and median UACR was 840 mg/g. Over a median of 2.2 years, 13% experienced kidney function decline and 9% died. In fully-adjusted models, the highest vs. lowest quartiles of MCP-1 and YKL-40 were associated with 2.18- and 1.76-fold higher risks of kidney function decline, respectively. One-year changes in KIM-1, MCP-1, and YKL-40 were not associated with subsequent eGFR decline. Higher baseline levels of NGAL, IL-18, MCP-1, and YKL-40 levels (per 2-fold higher) were independently associated with 10-40% higher risk of mortality. Discussion/Conclusion: Among Veterans with diabetes and CKD, urinary biomarkers of tubular health were associated with kidney function decline and mortality.
DOI: 10.6084/m9.figshare.21865509.v1
title: Supplementary Material for: Urinary Biomarkers of Tubular Health and Risk for Kidney Function Decline or Mortality in Diabetes

description: Introduction: Diabetes is a leading cause of end-stage kidney disease (ESKD). Biomarkers of tubular health may prognosticate chronic kidney disease (CKD) progression beyond estimated glomerular filtration rate (eGFR) and urine albumin-to-creatinine ratio (UACR). Methods: We examined associations of five urinary biomarkers of tubular injury and repair (NGAL, KIM-1, IL-18, MCP-1, YKL-40) with kidney function decline (first occurrence of a decrease in eGFR≥30 ml/min/1.73 m2 if randomization eGFR≥60 or ≥50% if randomization eGFR&lt;60; ESKD) and all-cause mortality among 1,135 VA NEPHRON-D trial participants with baseline UACR ≥300 mg/g and available urine samples. Covariates included age, sex, race, BMI, systolic BP, HbA1c, treatment arm, eGFR, and UACR. In a subset of participants with 12-month samples (n=712), we evaluated associations of KIM-1, MCP-1, and YKL-40 change (from baseline to 12 months) with eGFR decline (from 12 months onwards). Results: At baseline, mean age was 65 years, mean eGFR was 56 ml/min/1.73 m2, and median UACR was 840 mg/g. Over a median of 2.2 years, 13% experienced kidney function decline and 9% died. In fully-adjusted models, the highest vs. lowest quartiles of MCP-1 and YKL-40 were associated with 2.18- and 1.76-fold higher risks of kidney function decline, respectively. One-year changes in KIM-1, MCP-1, and YKL-40 were not associated with subsequent eGFR decline. Higher baseline levels of NGAL, IL-18, MCP-1, and YKL-40 levels (per 2-fold higher) were independently associated with 10-40% higher risk of mortality. Discussion/Conclusion: Among Veterans with diabetes and CKD, urinary biomarkers of tubular health were associated with kidney function decline and mortality.
DOI: 10.5281/zenodo.7525731
title: Table S4

description: List of new aminoglycoside resistance genes predicted in this study
DOI: 10.5281/zenodo.7525730
title: Table S4

description: List of new aminoglycoside resistance genes predicted in this study
DOI: 10.6084/m9.figshare.21710264
title: Supplementary Material for: TypeⅡ left pulmonary artery sling associated with double outlet right ventricle diagnosed by fetal echocardiography and postnatal computer tomography

description: Left pulmonary artery sling (LPAS) is a rare congenital vascular anomaly which can be isolated or associated with other malformations. Patients with LPAS usually have symptoms of airway obstruction. We present a case of typeⅡLPAS associated with double outlet right ventricle diagnosed by fetal echocardiography and postnatal computer tomography. Prenatal diagnosis of LPAS will facilitate postnatal care and timely treatment.
DOI: 10.6084/m9.figshare.21710264.v1
title: Supplementary Material for: TypeⅡ left pulmonary artery sling associated with double outlet right ventricle diagnosed by fetal echocardiography and postnatal computer tomography

description: Left pulmonary artery sling (LPAS) is a rare congenital vascular anomaly which can be isolated or associated with other malformations. Patients with LPAS usually have symptoms of airway obstruction. We present a case of typeⅡLPAS associated with double outlet right ventricle diagnosed by fetal echocardiography and postnatal computer tomography. Prenatal diagnosis of LPAS will facilitate postnatal care and timely treatment.
DOI: 10.15784/601643
title: Gridded sea ice concentrations from National Ice Center (NIC) Charts 2014-2019 for Western Antarctic Peninsula

description: This dataset contains gridded sea ice concentrations developed from vector GIS National Ice Center (NIC) Charts for a portion of the western Antarctic Peninsula. This dataset was developed in support of projects ANT-1744550, -1744570, -1744584, and -1744602. It contains geotif files containing the minimum, maximum, and midpoint (average) sea ice concentrations in tenths calculated from NIC vector GIS layers for the 2008-2019 time period.
DOI: 10.5281/zenodo.7525727
title: Blowing simulation data

description: Results of 100 simulations of blowing a preform with varying parameters
DOI: 10.5281/zenodo.7525726
title: Blowing simulation data

description: Results of 100 simulations of blowing a preform with varying parameters
DOI: 10.5281/zenodo.7525467
title: Quartet of familiar males – 17q21.31 Del mouse strain – 2 WT + 2 Del/+ - M3

description: We monitored the individual and social behaviours of each quartet of mice over three days and nights in the Live Mouse Tracker system (LMT, plugin 931; de Chaumont et al. 2019 Nat. Biomed. Engin.). This system tracks individually mice living in a group over several days and nights and extracts automatically the number, total duration and mean duration of more than thirty behavioural events describing the posture of the mouse, the types of social contacts, the dynamic social approach and escapes and complex social groupings (see de Chaumont et al. 2019 Nat. Biomed. Engin.). In this system, the four mice (10-14 weeks of age; 2 WT mice and 2 Del/+ mice) from the same housing cage (housed together from weaning on) were left undisturbed for 71 hours in a large transparent Plexiglas cage (50 x 50 x 40 cm), with fresh bedding, a house (width: 100 mm, depth: 75 mm, height: 40 mm) in red Plexiglas, 6 dental cotton rolls as well as food and water ad libitum. Light/dark cycle and temperature conditions were similar to those of the housing room (12/12h light/dark, lights on at 07:00 AM, 100 lux when the lights were on). Each recording session started between 03:00 and 04:00 PM. At the end of the session, mice were placed back in their home cage and the LMT setup was cleaned with soap water and dried with paper towels. The upload includes the sqlite database from LMT (processed).
DOI: 10.5281/zenodo.7525466
title: Quartet of familiar males – 17q21.31 Del mouse strain – 2 WT + 2 Del/+ - M3

description: We monitored the individual and social behaviours of each quartet of mice over three days and nights in the Live Mouse Tracker system (LMT, plugin 931; de Chaumont et al. 2019 Nat. Biomed. Engin.). This system tracks individually mice living in a group over several days and nights and extracts automatically the number, total duration and mean duration of more than thirty behavioural events describing the posture of the mouse, the types of social contacts, the dynamic social approach and escapes and complex social groupings (see de Chaumont et al. 2019 Nat. Biomed. Engin.). In this system, the four mice (10-14 weeks of age; 2 WT mice and 2 Del/+ mice) from the same housing cage (housed together from weaning on) were left undisturbed for 71 hours in a large transparent Plexiglas cage (50 x 50 x 40 cm), with fresh bedding, a house (width: 100 mm, depth: 75 mm, height: 40 mm) in red Plexiglas, 6 dental cotton rolls as well as food and water ad libitum. Light/dark cycle and temperature conditions were similar to those of the housing room (12/12h light/dark, lights on at 07:00 AM, 100 lux when the lights were on). Each recording session started between 03:00 and 04:00 PM. At the end of the session, mice were placed back in their home cage and the LMT setup was cleaned with soap water and dried with paper towels. The upload includes the sqlite database from LMT (processed).
DOI: 10.5281/zenodo.6966198
title: Dataset used in the paper: "Can clay mimic the high reflectivity of briny water below the Martian SPLD?"

description: Data saved as Matlab files regarding: the measurements of complex permittivity of a wet sample of STX1B clay as a function of temperature at 4 MHz applying fast and slow cooling and heating cycles; the measeurement of the complex permittiivity as a function of frequency at a fixed temperature (220K) for a dry sample of STX1B clay; the measeurement of the complex permittiivity as a function of frequency at a fixed temperature (230K) for a wet sample of STX1B clay; Detailed description of the data can be found in the Readme.txt
DOI: 10.5281/zenodo.6966199
title: Dataset used in the paper: "Can clay mimic the high reflectivity of briny water below the Martian SPLD?"

description: Data saved as Matlab files regarding: the measurements of complex permittivity of a wet sample of STX1B clay as a function of temperature at 4 MHz applying fast and slow cooling and heating cycles the measeurement of the complex permittiivity as a function of frequency at a fixed temperature (220K) for a dry sample of STX1B clay. the measeurement of the complex permittiivity as a function of frequency at a fixed temperature (230K) for a wet sample of STX1B clay.
DOI: 10.5281/zenodo.7289369
title: Dataset used in the paper: "Can clay mimic the high reflectivity of briny water below the Martian SPLD?"

description: Data saved as Matlab files regarding: the measurements of complex permittivity of a wet sample of STX1B clay as a function of temperature at 4 MHz applying fast and slow cooling and heating cycles; the measeurement of the complex permittiivity as a function of frequency at a fixed temperature (220K) for a dry sample of STX1B clay; the measeurement of the complex permittiivity as a function of frequency at a fixed temperature (230K) for a wet sample of STX1B clay; Detailed description of the data can be found in the Readme.txt
DOI: 10.5281/zenodo.7525763
title: Dataset used in the paper: "Can clay mimic the high reflectivity of briny water below the Martian SPLD?"

description: Data saved as Matlab files regarding: the measurements of complex permittivity of a wet sample of STX1B clay as a function of temperature at 4 MHz applying fast and slow cooling and heating cycles; the measeurement of the complex permittiivity as a function of frequency at a fixed temperature (220K) for a dry sample of STX1B clay; the measeurement of the complex permittiivity as a function of frequency at a fixed temperature (230K) for a wet sample of STX1B clay; Detailed description of the data can be found in the Readme.txt
DOI: 10.6084/m9.figshare.21865410
title: Data from airborne hyperspectral and Sentinel imagery to quantify winter wheat traits through ensemble modeling approaches

description: The dataset includes agronomical, spectral and thermal information derived from a field experiment sowed with winter wheat (<em>Triticum aestivum</em> L.) at La Chimenea farm station (40º04’N, 03º32’W, 550 m a.s.l.), near Aranjuez (Madrid, Spain) during two consecutive growing seasons: 2017/2018 and 2018/2019. Each year, it was established 32 plots that were randomly divided into 4 N levels (N0, N1, N2, N3) and two water levels (w1 and W2) with four replications. The N levels ranged from non-fertilized (N0) to over-fertilized (N3). The two water levels were established at the beginning of flowering by irrigating half of the plots (W2). Spectral and thermal measurements were collected from a hyperspectral and a thermal sensors onboard an aircraft. The hyperspectral imager covering the VNIR region (Hyperspec VNIR model, Headwall Photonics, Fitchburg, MA, USA) captured the reflected light between 400 and 850 nm. <strong>+ Detailed description</strong> The file ‘dataset_crop_VIs.xlsx’ contains treatment factors, agronomic variables of wheat at flowering and harvest (aboveground biomass dry weight, N concentration, yield and others defined in the key spreadsheet), vegetation indices calculated from the hyperspectral airborne imagery, water deficit index, vegetation indices calculated from Sentinel-2 satellite imagery, solar induce fluorescence and Sentinel-2 bands convolved with the hyperspectral airborne information. The file “airborne_reflectance_1nm.xlsx” contains treatment factors and the average spectra of each plot resampled to 1 nm measured extracted from the airborne hyperspectral imagery acquired in two different dates. <strong>+ Value of the data</strong> The present dataset could help researchers and farmers to identify suitable genotypes and their responses to nitrogen and water stress. +The original images used are available under request to the authors. More detailed information about the dataset and methodology can be found in the article entitled “Airborne hyperspectral and Sentinel imagery to quantify winter wheat traits through ensemble modeling approaches” published in Precision Agriculture by Pancorbo et al. in 2023.
DOI: 10.5281/zenodo.6646207
title: Simulated hepatitis B virus (HBV) sequencing data and HBV sequence variation graph materials

description: Simulated HBV sequencing data (InSilicoSeq, HiSeq error model) and a sequence variation graph constructed using HBV genome sequences described in https://doi.org/10.1099/jgv.0.001387
DOI: 10.5281/zenodo.6646206
title: Simulated hepatitis B virus (HBV) sequencing data and HBV sequence variation graph materials

description: Simulated HBV sequencing data (InSilicoSeq, HiSeq error model) and a sequence variation graph constructed using HBV genome sequences described in https://doi.org/10.1099/jgv.0.001387
DOI: 10.34740/kaggle/dsv/4839351
title: Mahanagar Yatayat Dataset
DOI: 10.5281/zenodo.7473864
title: An analgesic pathway from parvocellular oxytocin neurons to the periaqueductal gray in rats

description: Raw data set related to the publication "An analgesic pathway from parvocellular oxytocin neurons to the periaqueductal gray in rats". It includes ex vivo electrophysiology, ex vivo GRAB recordings, and neuroanatomy data.
description: -
DOI: 10.5281/zenodo.7473865
title: An analgesic pathway from parvocellular oxytocin neurons to the periaqueductal gray in rats

description: Raw data set related to the publication "An analgesic pathway from parvocellular oxytocin neurons to the periaqueductal gray in rats". It includes ex vivo electrophysiology, ex vivo GRAB recordings, and neuroanatomy data.
description: -
DOI: 10.15139/s3/wl3o44
title: CLIP study: MDR-TB treatment cohort

description: A prospective cohort study of patients treated for MDR-TB in the country of Georgia from 2015-2017
DOI: 10.5281/zenodo.3340802
title: finals_2019_07_259

description: Log and boot files of game 259
DOI: 10.5281/zenodo.3340805
title: finals_2019_07_260

description: Log and boot files of game 260
DOI: 10.5281/zenodo.3340806
title: finals_2019_07_260

description: Log and boot files of game 260
DOI: 10.5281/zenodo.3340807
title: finals_2019_07_261

description: Log and boot files of game 261
DOI: 10.5281/zenodo.3340808
title: finals_2019_07_261

description: Log and boot files of game 261
DOI: 10.5281/zenodo.3340809
title: finals_2019_07_262

description: Log and boot files of game 262
DOI: 10.5281/zenodo.3340810
title: finals_2019_07_262

description: Log and boot files of game 262
DOI: 10.5281/zenodo.3340811
title: finals_2019_07_263

description: Log and boot files of game 263
DOI: 10.5281/zenodo.3340812
title: finals_2019_07_263

description: Log and boot files of game 263
DOI: 10.5281/zenodo.3340813
title: finals_2019_07_264

description: Log and boot files of game 264
DOI: 10.5281/zenodo.3340814
title: finals_2019_07_264

description: Log and boot files of game 264
DOI: 10.5281/zenodo.3340815
title: finals_2019_07_265

description: Log and boot files of game 265
DOI: 10.5281/zenodo.3340816
title: finals_2019_07_265

description: Log and boot files of game 265
DOI: 10.5281/zenodo.3340818
title: finals_2019_07_266

description: Log and boot files of game 266
DOI: 10.5281/zenodo.3340817
title: finals_2019_07_266

description: Log and boot files of game 266
DOI: 10.5281/zenodo.3340819
title: finals_2019_07_267

description: Log and boot files of game 267
DOI: 10.5281/zenodo.3340820
title: finals_2019_07_267

description: Log and boot files of game 267
DOI: 10.5281/zenodo.3340821
title: finals_2019_07_268

description: Log and boot files of game 268
DOI: 10.5281/zenodo.3340822
title: finals_2019_07_268

description: Log and boot files of game 268
DOI: 10.5281/zenodo.3340823
title: finals_2019_07_269

description: Log and boot files of game 269
DOI: 10.5281/zenodo.3340824
title: finals_2019_07_269

description: Log and boot files of game 269
DOI: 10.5281/zenodo.3340826
title: finals_2019_07_270

description: Log and boot files of game 270
DOI: 10.17632/rjw79x25j5.1
title: Data for: Trace element distributions in Late Neolithic/Early Chalcolithic human molars from the Rioja Alavesa region (north-central Spain): Biogenic or Diagenetic?

description: Supplementary datasets for the manuscript titled "High-resolution trace element distributions and models of trace element diffusion in enamel of Late Neolithic/Early Chalcolithic human molars from the Rioja Alavesa region (north-central Spain) help to separate biogenic from diagenetic trends"
DOI: 10.5281/zenodo.3340825
title: finals_2019_07_270

description: Log and boot files of game 270
DOI: 10.5281/zenodo.3340827
title: finals_2019_07_271

description: Log and boot files of game 271
DOI: 10.5281/zenodo.3340828
title: finals_2019_07_271

description: Log and boot files of game 271
DOI: 10.5281/zenodo.3340829
title: finals_2019_07_272

description: Log and boot files of game 272
DOI: 10.5281/zenodo.3340830
title: finals_2019_07_272

description: Log and boot files of game 272
DOI: 10.5281/zenodo.3340833
title: finals_2019_07_273

description: Log and boot files of game 273
DOI: 10.5281/zenodo.3340834
title: finals_2019_07_273

description: Log and boot files of game 273
DOI: 10.5281/zenodo.3340837
title: finals_2019_07_274

description: Log and boot files of game 274
DOI: 10.5281/zenodo.3340838
title: finals_2019_07_274

description: Log and boot files of game 274
DOI: 10.5281/zenodo.3340839
title: finals_2019_07_275

description: Log and boot files of game 275
DOI: 10.5281/zenodo.3340840
title: finals_2019_07_275

description: Log and boot files of game 275
DOI: 10.5281/zenodo.3340843
title: finals_2019_07_276

description: Log and boot files of game 276
DOI: 10.5281/zenodo.3340844
title: finals_2019_07_276

description: Log and boot files of game 276
DOI: 10.5281/zenodo.3340847
title: finals_2019_07_277

description: Log and boot files of game 277
DOI: 10.5281/zenodo.3340848
title: finals_2019_07_277

description: Log and boot files of game 277
DOI: 10.5281/zenodo.3340851
title: finals_2019_07_278

description: Log and boot files of game 278
DOI: 10.5281/zenodo.3340852
title: finals_2019_07_278

description: Log and boot files of game 278
DOI: 10.5281/zenodo.3340853
title: finals_2019_07_279

description: Log and boot files of game 279
DOI: 10.5281/zenodo.3340854
title: finals_2019_07_279

description: Log and boot files of game 279