cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5883/bold:aau0907
title: Barcode Index Number BOLD:AAU0907

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0908
title: Overview of Barcode Index Number - BOLD:AAU0908

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0915
title: Overview of Barcode Index Number - BOLD:AAU0915

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0916
title: Barcode Index Number BOLD:AAU0916

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0918
title: Barcode Index Number BOLD:AAU0918

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0923
title: Barcode Index Number BOLD:AAU0923

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0926
title: Barcode Index Number BOLD:AAU0926

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0927
title: Overview of Barcode Index Number - BOLD:AAU0927

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0929
title: Overview of Barcode Index Number - BOLD:AAU0929

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0931
title: Barcode Index Number BOLD:AAU0931

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0934
title: Barcode Index Number BOLD:AAU0934

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0943
title: Overview of Barcode Index Number - BOLD:AAU0943

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0944
title: Overview of Barcode Index Number - BOLD:AAU0944

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0949
title: Barcode Index Number BOLD:AAU0949

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0951
title: Overview of Barcode Index Number - BOLD:AAU0951

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0953
title: Barcode Index Number BOLD:AAU0953

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0954
title: Barcode Index Number BOLD:AAU0954

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0963
title: Barcode Index Number BOLD:AAU0963

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0965
title: Barcode Index Number BOLD:AAU0965

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.15468/dl.evaa9x
title: Occurrence Download

description: A dataset containing 7024 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asplenium incisum Thunb.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7024 records from 118 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008721-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5883/bold:aau0974
title: Overview of Barcode Index Number - BOLD:AAU0974

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.15468/dl.pgsrhh
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polystachya odorata subsp. trilepidis (Summerh.) Stévart"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008722-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5883/bold:aau0980
title: Overview of Barcode Index Number - BOLD:AAU0980

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau0982
title: Overview of Barcode Index Number - BOLD:AAU0982

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau1000
title: Overview of Barcode Index Number - BOLD:AAU1000

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau1007
title: Overview of Barcode Index Number - BOLD:AAU1007

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau1008
title: Barcode Index Number BOLD:AAU1008

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.6084/m9.figshare.26142850
title: LY333531 attenuates contraction of tumor necrosis factor-α-sensitized human airway smooth muscle cells

description: Protein kinase C (PKC) has been implicated in the increased contraction of human airway smooth muscle cells (HASMCs) in asthma. Using the three-dimensional collagen gel contraction system, the study aimed to determine the effects of LY333531, a specific inhibitor of the PKC-β isoform, on the contraction of tumor necrosis factor (TNF)-α-sensitized HASMCs. Cultured HASMCs were divided into five groups: the control group received no treatment, and the cells in the TNF-α group were sensitized with 10 ng/mL TNF-α for 48 h, while TNF-α was administered to sensitize HASMCs in the presence of 0.1, 0.2, and 0.5 μM LY333531 for 48 h in the 0.1LY, 0.2LY, and 0.5LY groups, respectively. Following this, HASMCs contraction was stimulated with 1 mM acetylcholine (ACh) for up to 24 h in each group and assessed using a three-dimensional collagen gel contraction assay. Furthermore, western blot and immunofluorescence analysis were performed. The collagen gel contraction assay revealed that TNF-α increased the protein expression of phosphorylated PKC-β2, CPI-17, and MLC while exacerbating ACh-induced HASMCs contraction. LY333531 significantly attenuated HASMCs contraction and downregulated the protein expression of both p-CPI-17 and p-MLC. At least in part by regulating CPI-17 and MLC phosphorylation, LY333531 attenuates augmented contraction of TNF-α-sensitized HASMCs in a collagen gel contraction system.
DOI: 10.6084/m9.figshare.26142850.v1
title: LY333531 attenuates contraction of tumor necrosis factor-α-sensitized human airway smooth muscle cells

description: Protein kinase C (PKC) has been implicated in the increased contraction of human airway smooth muscle cells (HASMCs) in asthma. Using the three-dimensional collagen gel contraction system, the study aimed to determine the effects of LY333531, a specific inhibitor of the PKC-β isoform, on the contraction of tumor necrosis factor (TNF)-α-sensitized HASMCs. Cultured HASMCs were divided into five groups: the control group received no treatment, and the cells in the TNF-α group were sensitized with 10 ng/mL TNF-α for 48 h, while TNF-α was administered to sensitize HASMCs in the presence of 0.1, 0.2, and 0.5 μM LY333531 for 48 h in the 0.1LY, 0.2LY, and 0.5LY groups, respectively. Following this, HASMCs contraction was stimulated with 1 mM acetylcholine (ACh) for up to 24 h in each group and assessed using a three-dimensional collagen gel contraction assay. Furthermore, western blot and immunofluorescence analysis were performed. The collagen gel contraction assay revealed that TNF-α increased the protein expression of phosphorylated PKC-β2, CPI-17, and MLC while exacerbating ACh-induced HASMCs contraction. LY333531 significantly attenuated HASMCs contraction and downregulated the protein expression of both p-CPI-17 and p-MLC. At least in part by regulating CPI-17 and MLC phosphorylation, LY333531 attenuates augmented contraction of TNF-α-sensitized HASMCs in a collagen gel contraction system.
DOI: 10.5883/bold:aau1011
title: Overview of Barcode Index Number - BOLD:AAU1011

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.5883/bold:aau1012
title: Barcode Index Number BOLD:AAU1012

description: A cluster of barcode records associated with a Barcode Index Number(BIN). Each cluster is a proxy for a named or unnamed species. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.6084/m9.figshare.25892596.v1
title: House dust mite allergen Der f 2 drives IL-6 and GM–CSF expression in airway epithelial cells via p38 MAPK/NF-κB signaling

description: Der f 2, a major allergen derived from <i>Dermatophagoides farinae</i>, is a leading cause of allergic asthma. IL-6 and GM–CSF play essential roles in the exacerbation of asthma. However, the mechanical act by which Der f 2 mediates the expression of IL-6, IL-8, and GM–CSF in airway epithelial cells remains incompletely elucidated. Herein, we aimed to explore the effect of Der f 2 on IL-6 and GM–CSF expression in the human airway epithelial cell BEAS-2B and A549. Recombinant Der f 2 (rDf2) was acquired using <i>Pichia pastoris</i>. BEAS-2B and A549 cells were used as cell model. The expression of genes and proteins and the involvement of the signaling cascade were assessed using RT–PCR, quantitative real-time PCR (qPCR), Western blotting, and ELISA, respectively. Our findings showed that rDf2 significantly induced mRNA expression and protein production of IL-6 and GM-CSF in BEAS-2B and A549 cells. In contrast, rDf2 did not influence IL-8 expression or production in both cells. Mechanistic studies revealed that rDf2 triggered activation of the p38 MAPK and JNK. Inhibition of p38, but not JNK, significantly attenuated rDf2-induced IL-6 and GM–CSF expression and production. This study demonstrates that Der f 2 promotes the expression and production of the pro-inflammatory cytokines IL-6 and GM–CSF in airway epithelial cells via activation of the p38 signaling pathway. These findings provide insights into the molecular mechanisms that Der f 2 may exacerbate airway inflammation.
DOI: 10.6084/m9.figshare.26014923
title: Effect of different inhalant allergens on T-cell subsets in adults with bronchial asthma

description: We analyzed the impact of different inhalant allergens on T-lymphocyte subsets in patients diagnosed with bronchial asthma. The study included 57 bronchial asthma patients and 22 healthy controls. Asthma patients were categorized into dust mite, animal hair, pollen, and mold groups. Flow cytometry was used to measure the cells in the case group and control group. These T-lymphocyte subset markers were evaluated among patients with bronchial asthma caused by different allergens as well as between the case group and control group. Peripheral blood CD4<sup>+</sup> T-cells, CD8<sup>+</sup> T-cells, CD4/CD8 ratio, and Th17/Treg ratios were all higher in the case group than in the control group (<i>p</i> &lt; 0.05). Peripheral blood T-lymphocyte subsets were compared among the four groups, and it was found that there were statistical differences in the Th17/Treg ratio among the four groups (<i>p</i> &lt; 0.05). There were no significant differences observed among the four groups in terms of CD3+ cells, CD4+ cells, CD8+ cells, Th1 cells, Th2 cells, Th17 cells, Treg cells, Th9 cells, and Th22 cells. Further pairwise comparison was made, and the results suggested that the peripheral blood Th17/Treg ratio in the pollen mixed group was lower than that in the dust mite mixed group, animal hair mixed group, and mold mixed group (<i>p</i> &lt; 0.05). Patients with bronchial asthma show varied T-lymphocyte subset responses to different inhalant allergens. Elevated CD4+ T cells and Th17 cells in peripheral blood could indicate asthma risk. However, small sample size may introduce bias to these findings.
DOI: 10.15468/dd.yu8mst
title: Distribution records of Symbolophorus evermanni

description: These records of Symbolophorus evermanni were downloaded from GBIF on 2019-09-11.
DOI: 10.5281/zenodo.15160746
title: Table 1 in Revision of Indian Ischnothelidae (Arachnida: Araneae) and descriptions of two new species of Indothele Coyle, 1995

description: Table 1. Morphometry of legs and palp of Indothele amboli Kadam, Tripathi & Sherwood sp. nov., holotype, ♂ (HT; NRC-AA-9037) and paratype ♀ (PT; NRC-AA-9038).
Leg ILeg IILeg IIILeg IVPalpHTPTHTPTHTPTHTPTHTPTFemur2.682.642.702.872.782.983.013.621.662.18Patella1.381.421.251.311.121.321.291.560.811.09Tibia1.992.041.931.981.882.082.392.691.111.45Metatarsus1.951.842.291.882.612.713.553.30––Tarsus1.361.211.521.351.681.641.771.861.531.62Total9.369.159.699.3910.0710.7311.0113.035.116.34
description: Published as part of Tripathi, Rishikesh, Kadam, Gautam, Sherwood, Danniella & Sudhikumar, Ambalaparambil Vasu, 2025, Revision of Indian Ischnothelidae (Arachnida: Araneae) and descriptions of two new species of Indothele Coyle, 1995, pp. 195 in European Journal of Taxonomy 981 (1) on page 195, DOI: 10.5852/ejt.2025.981.2827, http://zenodo.org/record/15044336
DOI: 10.5281/zenodo.15160747
title: Table 1 in Revision of Indian Ischnothelidae (Arachnida: Araneae) and descriptions of two new species of Indothele Coyle, 1995

description: Table 1. Morphometry of legs and palp of Indothele amboli Kadam, Tripathi & Sherwood sp. nov., holotype, ♂ (HT; NRC-AA-9037) and paratype ♀ (PT; NRC-AA-9038).
Leg ILeg IILeg IIILeg IVPalpHTPTHTPTHTPTHTPTHTPTFemur2.682.642.702.872.782.983.013.621.662.18Patella1.381.421.251.311.121.321.291.560.811.09Tibia1.992.041.931.981.882.082.392.691.111.45Metatarsus1.951.842.291.882.612.713.553.30––Tarsus1.361.211.521.351.681.641.771.861.531.62Total9.369.159.699.3910.0710.7311.0113.035.116.34
description: Published as part of Tripathi, Rishikesh, Kadam, Gautam, Sherwood, Danniella & Sudhikumar, Ambalaparambil Vasu, 2025, Revision of Indian Ischnothelidae (Arachnida: Araneae) and descriptions of two new species of Indothele Coyle, 1995, pp. 195 in European Journal of Taxonomy 981 (1) on page 195, DOI: 10.5852/ejt.2025.981.2827, http://zenodo.org/record/15044336
DOI: 10.5281/zenodo.15160748
title: Table 2 in Revision of Indian Ischnothelidae (Arachnida: Araneae) and descriptions of two new species of Indothele Coyle, 1995

description: Table 2. Morphometry of legs and palp of Indothele silentvalley Tripathi, Kadam & Sherwood sp. nov., holotype, ♂ (HT; NRC-AA-9039) and paratype, ♀ (PT; NRC-AA-9040).
Leg ILeg IILeg IIILeg IVPalpHTPTHTPTHTPTHTPTHTPTFemur2.241.852.351.832.541.982.802.171.441.16Patella0.980.731.020.780.930.651.071.010.720.65Tibia1.811.241.771.361.911.732.081.790.780.85Metatarsus1.781.262.291.192.751.533.362.07––Tarsus1.180.851.430.791.441.191.751.191.051.02Total7.995.938.865.959.577.0811.068.233.993.68
description: Published as part of Tripathi, Rishikesh, Kadam, Gautam, Sherwood, Danniella & Sudhikumar, Ambalaparambil Vasu, 2025, Revision of Indian Ischnothelidae (Arachnida: Araneae) and descriptions of two new species of Indothele Coyle, 1995, pp. 200 in European Journal of Taxonomy 981 (1) on page 200, DOI: 10.5852/ejt.2025.981.2827, http://zenodo.org/record/15044336
DOI: 10.5281/zenodo.15160749
title: Table 2 in Revision of Indian Ischnothelidae (Arachnida: Araneae) and descriptions of two new species of Indothele Coyle, 1995

description: Table 2. Morphometry of legs and palp of Indothele silentvalley Tripathi, Kadam & Sherwood sp. nov., holotype, ♂ (HT; NRC-AA-9039) and paratype, ♀ (PT; NRC-AA-9040).
Leg ILeg IILeg IIILeg IVPalpHTPTHTPTHTPTHTPTHTPTFemur2.241.852.351.832.541.982.802.171.441.16Patella0.980.731.020.780.930.651.071.010.720.65Tibia1.811.241.771.361.911.732.081.790.780.85Metatarsus1.781.262.291.192.751.533.362.07––Tarsus1.180.851.430.791.441.191.751.191.051.02Total7.995.938.865.959.577.0811.068.233.993.68
description: Published as part of Tripathi, Rishikesh, Kadam, Gautam, Sherwood, Danniella & Sudhikumar, Ambalaparambil Vasu, 2025, Revision of Indian Ischnothelidae (Arachnida: Araneae) and descriptions of two new species of Indothele Coyle, 1995, pp. 200 in European Journal of Taxonomy 981 (1) on page 200, DOI: 10.5852/ejt.2025.981.2827, http://zenodo.org/record/15044336
DOI: 10.5281/zenodo.15160750
title: Table 3 in Revision of Indian Ischnothelidae (Arachnida: Araneae) and descriptions of two new species of Indothele Coyle, 1995

description: Table 3. Morphometry of legs and palp of non-type male of Indothele mala Coyle, 1995 (BMNH).
Leg ILeg IILeg IIILeg IVPalpFemur2.742.532.553.041.47Patella1.391.471.081.291.13Tibia1.771.481.582.181.20Metatarsus1.751.882.553.11–Tarsus1.281.451.781.901.24Total8.938.819.5411.525.04
description: Published as part of Tripathi, Rishikesh, Kadam, Gautam, Sherwood, Danniella & Sudhikumar, Ambalaparambil Vasu, 2025, Revision of Indian Ischnothelidae (Arachnida: Araneae) and descriptions of two new species of Indothele Coyle, 1995, pp. 204 in European Journal of Taxonomy 981 (1) on page 204, DOI: 10.5852/ejt.2025.981.2827, http://zenodo.org/record/15044336
DOI: 10.5281/zenodo.15160752
title: Table 1 in A re-analysis of the data in Sharkey et al. ' s (2021) minimalist revision reveals that BINs do not deserve names, but BOLD Systems needs a stronger commitment to open science

description: Table 1 Comparison of published species and BIN numbers (April 2021)
StudyTaxaJournalBINs in BOLDSpecies or BINs publishedDeviation (%)Hebert et al. (2004) *Astraptes (Lepidoptera: Hesperiidae)PNAS510 species100Smith et al. (2006) *Belvosia (Diptera: Tachinidae)PNAS2032 species60.0Raupach et al. (2016)Carabidae (Coleoptera)ZooKeys5169 BINs35.3Chac´on et al. (2013)*Dunama (Lepidoptera: Notodontidae, Nystaleinae)ZooKeys68 species33.3Gibbs (2018)Lasioglossum (Hymenoptera: Halictidae)Genome85110 species29.4Fernandez-Triana et al. (2014) *Apanteles (Hymenoptera: Braconidae)ZooKeys240180 species25.0Smith et al. (2007) *various Tachinidae (Diptera)PNAS6173 species19.7Janzen et al. (2011) *Eudaminae and Pyrginae (Hesperiidae) skippersPLoS One294347† species18.0Hajibabaei et al. (2006) *Hesperiidae, Sphingidae, Saturniidae (Lepidoptera)PNAS600521 species13.2Fleming et al. (2019)Hyphantrophaga (Diptera, Tachinidae)Biodiversity Data Journal2522 species12.0Bartolini et al. (2020)Anastrepha (Diptera, Tephritidae)PLoS One1715 species11.8Pohjoism¨aki et al. (2016)Tachinidae (Diptera)PLoS One331366 BINs10.6Smith et al. (2008) *Braconidae (Hymenoptera)PNAS287313 species9.1Fleming et al. (2014) *Houghia (Diptera: Tachinidae)Zootaxa3435 species2.9Ortiz et al. (2017)Erebidae (Lepidoptera)Biodiversity Data Journal157160 species1.9Burns et al. (2008) *Perichares (Lepidoptera: Hesperiidae)PNAS55 species0
Table 1
Comparison of published species and BIN numbers (April 2021)
* Study cited in Sharkey et al.
† Number includes 44 putative barcode clusters.
description: Published as part of Meier, Rudolf, Blaimer, Bonnie B., Buenaventura, Eliana, Hartop, Emily, von Rintelen, Thomas, Srivathsan, Amrita & Yeo, Darren, 2021, A re-analysis of the data in Sharkey et al. ' s (2021) minimalist revision reveals that BINs do not deserve names, but BOLD Systems needs a stronger commitment to open science, pp. 269 in Cladistics 38 (2) on page 269, DOI: 10.1111/cla.12489, http://zenodo.org/record/15076025