cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20168084
title: Additional file 3 of Physiological constraints dictate toxin spatial heterogeneity in snake venom glands

description: Additional file 3. Raw absorbance data and area under the curve (AUC) values for the plasma coagulation assay, corresponding to data presented in Fig. 2D and Additional file 1: Fig. S5.
DOI: 10.6084/m9.figshare.20168087
title: Additional file 4 of Physiological constraints dictate toxin spatial heterogeneity in snake venom glands

description: Additional file 4. Raw % cell viability and IC50 values for the MTT viability assay, corresponding to data presented in Fig. 2E and Additional file 1: Fig. S6.
DOI: 10.6084/m9.figshare.20168091
title: Additional file 1 of Development and validation of a nomogram to predict plastic bronchitis in children with refractory Mycoplasma pneumoniae pneumonia

description: Additional file 1. Program on R package.
DOI: 10.6084/m9.figshare.20168091.v1
title: Additional file 1 of Development and validation of a nomogram to predict plastic bronchitis in children with refractory Mycoplasma pneumoniae pneumonia

description: Additional file 1. Program on R package.
DOI: 10.6084/m9.figshare.20168081.v1
title: Additional file 2 of Physiological constraints dictate toxin spatial heterogeneity in snake venom glands

description: Additional file 2. Multiple sequence alignment of identified mature 3FTx used for phylogenetic and genetic distance analyses. Toxins are named according to observed m/z, with the names corresponding to those listed in Additional file 1: Table S1.
DOI: 10.6084/m9.figshare.20168084.v1
title: Additional file 3 of Physiological constraints dictate toxin spatial heterogeneity in snake venom glands

description: Additional file 3. Raw absorbance data and area under the curve (AUC) values for the plasma coagulation assay, corresponding to data presented in Fig. 2D and Additional file 1: Fig. S5.
DOI: 10.6084/m9.figshare.20168087.v1
title: Additional file 4 of Physiological constraints dictate toxin spatial heterogeneity in snake venom glands

description: Additional file 4. Raw % cell viability and IC50 values for the MTT viability assay, corresponding to data presented in Fig. 2E and Additional file 1: Fig. S6.
DOI: 10.6084/m9.figshare.20168090
title: Additional file 5 of Physiological constraints dictate toxin spatial heterogeneity in snake venom glands

description: Additional file 5. Raw absorbance data Area Under the Curve (AUC) values for the enzymatic PLA2 assay, corresponding to data presented in Fig. 2F and Additional file 1: Fig. S7.
DOI: 10.6084/m9.figshare.20168093
title: Additional file 6 of Physiological constraints dictate toxin spatial heterogeneity in snake venom glands

description: Additional file 6. Raw fluorescence values for the SVMP assay, corresponding to Additional file 1: Fig. S8.
DOI: 10.6084/m9.figshare.20168093.v1
title: Additional file 6 of Physiological constraints dictate toxin spatial heterogeneity in snake venom glands

description: Additional file 6. Raw fluorescence values for the SVMP assay, corresponding to Additional file 1: Fig. S8.
DOI: 10.6084/m9.figshare.20168090.v1
title: Additional file 5 of Physiological constraints dictate toxin spatial heterogeneity in snake venom glands

description: Additional file 5. Raw absorbance data Area Under the Curve (AUC) values for the enzymatic PLA2 assay, corresponding to data presented in Fig. 2F and Additional file 1: Fig. S7.
DOI: 10.6084/m9.figshare.20168153
title: Additional file 2 of Exponential growth of systematic reviews assessing artificial intelligence studies in medicine: challenges and opportunities

description: Additional file 2.
DOI: 10.6084/m9.figshare.20168153.v1
title: Additional file 2 of Exponential growth of systematic reviews assessing artificial intelligence studies in medicine: challenges and opportunities

description: Additional file 2.
DOI: 10.6084/m9.figshare.20168136
title: Additional file 2 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 2. Results of BUSCO analyses on each of the three de novo transcriptome assemblies.
DOI: 10.6084/m9.figshare.20168136.v1
title: Additional file 2 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 2. Results of BUSCO analyses on each of the three de novo transcriptome assemblies.
DOI: 10.6084/m9.figshare.20168139
title: Additional file 3 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 3. Results of DESeq2 analyses on the reduced transcriptome.
DOI: 10.6084/m9.figshare.20168139.v1
title: Additional file 3 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 3. Results of DESeq2 analyses on the reduced transcriptome.
DOI: 10.6084/m9.figshare.20168142
title: Additional file 4 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 4. Results of GO enrichment analysis with TopGO.
DOI: 10.6084/m9.figshare.20168142.v1
title: Additional file 4 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 4. Results of GO enrichment analysis with TopGO.
DOI: 10.6084/m9.figshare.20168145
title: Additional file 5 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 5. Description of genes included in the visual gene dataset.
DOI: 10.6084/m9.figshare.20168145.v1
title: Additional file 5 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 5. Description of genes included in the visual gene dataset.
DOI: 10.6084/m9.figshare.20168148.v1
title: Additional file 6 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 6. Results of DESeq2 Analyses on the visual gene dataset.
DOI: 10.6084/m9.figshare.20168148
title: Additional file 6 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 6. Results of DESeq2 Analyses on the visual gene dataset.
DOI: 10.6084/m9.figshare.20168154
title: Additional file 7 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 7. Results MSP measurements and curve-fitting on each individual photoreceptor cell.
DOI: 10.6084/m9.figshare.20168154.v1
title: Additional file 7 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 7. Results MSP measurements and curve-fitting on each individual photoreceptor cell.
DOI: 10.6084/m9.figshare.20168157.v1
title: Additional file 8 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 8. Cross-normalized expression values for the visual gene dataset and dn/dc calculations for the lens crystallins.
DOI: 10.6084/m9.figshare.20168157
title: Additional file 8 of Transcriptomic evidence for visual adaptation during the aquatic to terrestrial metamorphosis in leopard frogs

description: Additional file 8. Cross-normalized expression values for the visual gene dataset and dn/dc calculations for the lens crystallins.
DOI: 10.6084/m9.figshare.20168171
title: Additional file 12 of Highly distinct genetic programs for peripheral nervous system formation in chordates

description: Additional file 12: Data 1. Phylogenetic analysis. Trees were calculated using maximum likelihood (ML) method with PhyML, and bootstrap supports are given at each node. Further details are indicated in materials and methods.
DOI: 10.6084/m9.figshare.20168174
title: Additional file 13 of Highly distinct genetic programs for peripheral nervous system formation in chordates

description: Additional file 13: Table S1. Listing of previously known vPNS genes in invertebrate chordates and their orthologs. Sheet 1. List of previously known vPNS genes in ascidians and their orthologs in amphioxus, and vice versa. Highlighting in blue indicates expression in ventral neurogenic field, in purple expression in ESNs and in red expression in other tissues. Highlighting in the gene family name indicates conserved expression in the ventral field (blue), the ESNs (purple), one of them (blue-purple) or non-conserved expression in vPNS (red). Sheet 2. Simplified view of sheet 1. nd: not done.
DOI: 10.6084/m9.figshare.20168174.v1
title: Additional file 13 of Highly distinct genetic programs for peripheral nervous system formation in chordates

description: Additional file 13: Table S1. Listing of previously known vPNS genes in invertebrate chordates and their orthologs. Sheet 1. List of previously known vPNS genes in ascidians and their orthologs in amphioxus, and vice versa. Highlighting in blue indicates expression in ventral neurogenic field, in purple expression in ESNs and in red expression in other tissues. Highlighting in the gene family name indicates conserved expression in the ventral field (blue), the ESNs (purple), one of them (blue-purple) or non-conserved expression in vPNS (red). Sheet 2. Simplified view of sheet 1. nd: not done.
DOI: 10.6084/m9.figshare.20168177
title: Additional file 14 of Highly distinct genetic programs for peripheral nervous system formation in chordates

description: Additional file 14: Table S2. Listing of all P. mammillata genes analysed in this study. Sheet 1. List of genes of P. mammillata analysed in this study. Red font for gene name indicates that phylogenetic analysis has been carried out. When available, GO term for molecular function (MF) and biological process (BP) are indicated. Highlighting in purple indicates genes coding for transcription factors, blue for receptors, green for genes involved in the nervous system and yellow for genes involved in cell signalling. The origin of template for Dig-probe synthesis (500 bp region for synthetic DNA, cloning primers or clone provenance) is shown. Finally, gene expressed in the vPNS are highlighted in orange. Sheet 2. Extraction from sheet 1 of the P. mammillata genes studied by orthology I (known vPNS genes + paralogs + amphioxus vPNS genes orthologs) and expressed in the vPNS.
DOI: 10.6084/m9.figshare.20168177.v1
title: Additional file 14 of Highly distinct genetic programs for peripheral nervous system formation in chordates

description: Additional file 14: Table S2. Listing of all P. mammillata genes analysed in this study. Sheet 1. List of genes of P. mammillata analysed in this study. Red font for gene name indicates that phylogenetic analysis has been carried out. When available, GO term for molecular function (MF) and biological process (BP) are indicated. Highlighting in purple indicates genes coding for transcription factors, blue for receptors, green for genes involved in the nervous system and yellow for genes involved in cell signalling. The origin of template for Dig-probe synthesis (500 bp region for synthetic DNA, cloning primers or clone provenance) is shown. Finally, gene expressed in the vPNS are highlighted in orange. Sheet 2. Extraction from sheet 1 of the P. mammillata genes studied by orthology I (known vPNS genes + paralogs + amphioxus vPNS genes orthologs) and expressed in the vPNS.
DOI: 10.6084/m9.figshare.20168180
title: Additional file 15 of Highly distinct genetic programs for peripheral nervous system formation in chordates

description: Additional file 15: Table S3. Listing of all B. lanceolatum genes analysed in this study. Sheet 1. List of genes of B. lanceolatum analysed in this study. Red font for gene name indicates that phylogenetic analysis has been carried out. When available, GO term for molecular function (MF) and biological process (BP) are indicated. Highlighting in purple indicates genes coding for transcription factors, blue for receptors; green for genes involved in the nervous system and yellow for genes involved in cell signalling. The origin of template for Dig-probe synthesis (500 bp region for synthetic DNA, cloning primers or clone provenance) is shown. Finally, genes expressed in the vPNS are highlighted in orange. Sheet 2. Extraction from sheet 1 of the B. lanceolatum genes studied by orthology I (known vPNS genes + paralogs + amphioxus vPNS genes orthologs) and expressed in the vPNS.
DOI: 10.6084/m9.figshare.20168180.v1
title: Additional file 15 of Highly distinct genetic programs for peripheral nervous system formation in chordates

description: Additional file 15: Table S3. Listing of all B. lanceolatum genes analysed in this study. Sheet 1. List of genes of B. lanceolatum analysed in this study. Red font for gene name indicates that phylogenetic analysis has been carried out. When available, GO term for molecular function (MF) and biological process (BP) are indicated. Highlighting in purple indicates genes coding for transcription factors, blue for receptors; green for genes involved in the nervous system and yellow for genes involved in cell signalling. The origin of template for Dig-probe synthesis (500 bp region for synthetic DNA, cloning primers or clone provenance) is shown. Finally, genes expressed in the vPNS are highlighted in orange. Sheet 2. Extraction from sheet 1 of the B. lanceolatum genes studied by orthology I (known vPNS genes + paralogs + amphioxus vPNS genes orthologs) and expressed in the vPNS.
DOI: 10.6084/m9.figshare.20168171.v1
title: Additional file 12 of Highly distinct genetic programs for peripheral nervous system formation in chordates

description: Additional file 12: Data 1. Phylogenetic analysis. Trees were calculated using maximum likelihood (ML) method with PhyML, and bootstrap supports are given at each node. Further details are indicated in materials and methods.
DOI: 10.25919/st5k-cx98
title: Parkes observations for project P885 semester 2022APRS_08

description: We request a continued reduced monitoring cadence for the magnetars 1E 1547.0-5408 and Swift J1818.0-1607 at once every 10 days, to track their rotation, flux density, and polarisation. Swift J1818.0-1607 remains very dynamic, and the unique UWL capabilities promise new opportunities to probe still mysterious radio emission mechanisms in magnetars. Our timing results indicate that 1E 1547.0-5408 is currently a more stable rotator, supporting the diminished cadence. We will observe XTE J1810-197 and PSR J1622-4950 less frequently, to complement monitoring elsewhere. The overall request is 18 hours.
DOI: 10.6084/m9.figshare.20168252.v1
title: Additional file 1 of A genome-wide association study of lateral root number for Asian cotton (Gossypium arboreum L.)

description: Additional file1. Table S1 Phenotypic data of lateral root number in 215 Gossypium arboreum accessions; Table S2 Basic description analysis of lateral root number in 215 Gossypium arboreum accessions; Table S3 18 significant SNPs of lateral root numbers in 215 Gossypium arboreum accessions; Table S4 19 candidate genes of lateral root number identified by the GWAS method; Table S5 TPM expression of candidate genes in different tissues
DOI: 10.6084/m9.figshare.20168252
title: Additional file 1 of A genome-wide association study of lateral root number for Asian cotton (Gossypium arboreum L.)

description: Additional file1. Table S1 Phenotypic data of lateral root number in 215 Gossypium arboreum accessions; Table S2 Basic description analysis of lateral root number in 215 Gossypium arboreum accessions; Table S3 18 significant SNPs of lateral root numbers in 215 Gossypium arboreum accessions; Table S4 19 candidate genes of lateral root number identified by the GWAS method; Table S5 TPM expression of candidate genes in different tissues
DOI: 10.6084/m9.figshare.20168286
title: Additional file 3 of Comprehensive genetic testing improves the clinical diagnosis and medical management of pediatric patients with isolated hearing loss

description: Additional file 3: Table S2. The genetic diagnosis results of 80 patients.
DOI: 10.6084/m9.figshare.20168286.v1
title: Additional file 3 of Comprehensive genetic testing improves the clinical diagnosis and medical management of pediatric patients with isolated hearing loss

description: Additional file 3: Table S2. The genetic diagnosis results of 80 patients.
DOI: 10.22008/fk2/i5r1ss/zuqpbk
title: readme_WSA_PLANT.txt

description: Readme file for WSA_PLANT.txt.
DOI: 10.22008/fk2/i5r1ss/lmvbjp
title: readme_WSA.txt

description: Readme file for WSA.shp (in WSA.zip).
DOI: 10.22008/fk2/i5r1ss/x2zypv
title: WSA_PLANT.txt

description: Table linking Water Supply Area identifier (WSAID) to the identifier of the drinking- water production facility in Jupiter (PLANTID).
DOI: 10.22008/fk2/i5r1ss/hxzmya
title: WSA.zip

description: Shape files containing the longitudinal Water Supply Areas (WSAs) with the start and end year of each WSA’s active period.
DOI: 10.22008/fk2/i5r1ss
title: Danish Water Supply Areas and their links to water production facilities: an open-access data set

description: This data set establishes the missing link between drinking-water quality monitoring data at the water production facility level in the Danish national geodatabase Jupiter and supply areas. Water Supply Areas (WSAs) were collected at municipality level, digitised and linked to the waterworks they are supplied by. Infrastructural changes between 1978 and 2019 were taken into account by allowing WSA polygons to change over time. The number of active WSAs decreased from 3172 in 1978 to 2602 in 2019. The data set consists of longitudinal WSA polygons and a table linking WSAs to the water production facility identification in the Jupiter database, allowing the estimation of cur-rent and historical drinking-water quality across Denmark. In combination with the Danish Address Register and the Civil Registration System, this data set allows exposure assessments of drink-ing-water quality at high spatiotemporal resolution for the entire Danish population. Therefore, this data set is an essential part of studying health effects of drinking-water quality in epidemiological research in Denmark.
DOI: 10.6084/m9.figshare.20168225
title: GeneOntologyData

description: Gene ontology data from Ebenig <em>et al</em>., 2022
DOI: 10.6084/m9.figshare.20168225.v1
title: GeneOntologyData

description: Gene ontology data from Ebenig <em>et al</em>., 2022
DOI: 10.25934/pr00008014
title: GSK

description: I am a researcher at the Access to Medicine Foundation, which publishes the Antimicrobial Resistance Benchmark. In the AMR Benchmark we assess pharmaceutical companies on their actions to curb AMR and one of the indicators is related to sharing AMR surveillance data. I need to assess the datasets shared on the AMR Register by the companies.
DOI: 10.6084/m9.figshare.20168474
title: brca count

description: fjhvbkjp
DOI: 10.6084/m9.figshare.20168474.v1
title: brca count

description: fjhvbkjp
DOI: 10.5281/zenodo.6684912
title: Electron diffraction image files of rhodamine-6g microcrystals with CRYO ARM 300

description: Diffraction images of rhodamine-6g collected with JEOL CRYO ARM 300 electron microscope at RIKEN, SPring-8. High-tension voltage was 300 kV. Camera distance was nominally 800 mm, but it could be calibrated with power-diffraction pattern of a gold sputtered grid. They were recorded with DirectElectron DE64 detector. Diffractions for orthorhombic crystals were collected at R.T. and cryo conditions and those for triclinic crystals were at cryo condition. Images were x2 binned and used for processing with DIALS. The output hkl files are also included in this entry.
DOI: 10.21942/uva.20160598.v1
title: 7T functional MRI finds no evidence for distinct functional subregions in the subthalamic nucleus during a speeded decision-making task

description: These are the data of ds-02 of the following paper: <br> Miletić, S., Keuken, M. C., Mulder, M. J., Trampel, R., De Hollander, G., & Forstmann, B. U. (2022). 7T functional MRI finds no evidence for distinct functional subregions in the subthalamic nucleus during a speeded decision-making task. Cortex. <br> <br> The directory tree is as follows: . ├── both &lt;---- 3rd-level whole-brain GLM which combines both datasets; FEAT output files and design matrices │ └── glm_level3 │ ├── cope10.gfeat │ ├── cope11.gfeat │ ├── cope12.gfeat │ ├── cope13.gfeat │ ├── cope14.gfeat │ ├── cope15.gfeat │ ├── cope1.gfeat │ ├── cope2.gfeat │ ├── cope3.gfeat │ ├── cope4.gfeat │ ├── cope5.gfeat │ ├── cope6.gfeat │ ├── cope7.gfeat │ ├── cope8.gfeat │ ├── cope9.gfeat │ ├── fsfs │ ├── third_level_design_dmc.con │ ├── third_level_design_dmc_cov.png │ ├── third_level_design_dmc_cov.ppm │ ├── third_level_design_dmc.fsf │ ├── third_level_design_dmc.grp │ ├── third_level_design_dmc.mat │ ├── third_level_design_dmc.png │ └── third_level_design_dmc.ppm └── ds-02 ├── conjunct_masks &lt;---- Conjunction of manually delineated STN masks per subject in MP2RAGEME space │ ├── sub-01 │ ├── sub-02 │ ├── sub-03 │ ├── sub-05 │ ├── sub-... │ └── sub-15 ├── extracted_signal &lt;---- fMRI timeseries extracted from individual STN subregions │ ├── sub-01 │ ├── sub-02 │ ├── sub-03 │ ├── sub-05 │ ├── sub-... │ └── sub-15 ├── feat_files &lt;---- First (run) & second (subject) level FSL FEAT files │ ├── sub-01 │ ├── sub-02 │ ├── sub-03 │ ├── sub-05 │ ├── sub-... │ └── sub-15 ├── fmriprep &lt;---- Output from fmriprep │ ├── dataset_description.json │ ├── desc-aparcaseg_dseg.tsv │ ├── desc-aseg_dseg.tsv │ ├── freesurfer │ ├── logs │ ├── sub-01 │ ├── sub-01.html │ ├── sub-02 │ ├── sub-02.html │ ├── sub-03 │ ├── sub-03.html │ ├── sub-05 │ ├── sub-05.html │ ├── sub-06 │ ├── sub-06.html │ ├── sub-... │ ├── sub-15 │ └── sub-15.html ├── fmriprep_data &lt;---- Input for fmriprep (bidsified "raw" data; "T1w" is masked so background noise doesnt mess up fmriprep, but otherwise unprocessed) │ ├── dataset_description.json │ ├── sub-01 │ ├── sub-02 │ ├── sub-03 │ ├── sub-05 │ ├── sub... │ ├── sub-15 │ └── task-randomdotmotion_bold.json ├── masks_warped &lt;---- stn (subregions) masks warped to relevant spaces │ ├── sub-01 │ ├── sub-02 │ ├── sub-03 │ ├── sub-05 │ ├── sub-... │ └── sub-15 ├── masks_warped_accolla &lt;---- stn (subregions) masks from Accolla et al (2014) warped to relevant spaces │ ├── sub-01 │ ├── sub-02 │ ├── sub-03 │ ├── sub-05 │ ├── sub-... │ └── sub-15 ├── MNI_group_space &lt;---- STN mask in group (MNI) space, and the PCA on these masks │ ├── group_stn_l.nii.gz │ ├── group_stn_r.nii.gz │ ├── mean_stnl.nii.gz │ ├── mean_stnr.nii.gz │ ├── stn_l_pca.nii.gz │ └── stn_r_pca.nii.gz └── PCA_segments &lt;---- subject-wise PCA-based STN segments ├── sub-01 ├── sub-02 ├── sub-03 ├── sub-05 ├── sub-... └── sub-15