cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7910/dvn/ujdojm/gdatte
title: 111-1_0131.dcm
DOI: 10.7910/dvn/wuq7h8/b8oq30
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DOI: 10.7910/dvn/xnurhy/doe0br
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DOI: 10.7910/dvn/xnurhy/zcqn9f
title: 136-5_0015.dcm
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DOI: 10.7910/dvn/zegu80/wa3egi
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DOI: 10.7910/dvn/4cful7/q5dqiv
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DOI: 10.7910/dvn/fcd8vl/dukofc
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DOI: 10.7910/dvn/izpnui/waojr5
title: 126-5_0051.dcm
DOI: 10.7910/dvn/o85klq/c0n63i
title: Bowtie_Index.tar.gz

description: Index files to run Bowtie2, plus fasta files used to generate the index (mitochondrial DNA and rRNA of mollusks).
DOI: 10.7910/dvn/o85klq/iltkbf
title: Content_Matrices.tar.gz

description: Lists of genes in each matrix. Original file names were Content_OGslice_XX (as described in Phylogenomic Inference Pipeline).
DOI: 10.7910/dvn/o85klq/n3vdeh
title: Convergence_Metrics_PhyloBayes.tab

description: :unav
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DOI: 10.7910/dvn/punsjf/i7gt61
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DOI: 10.7910/dvn/u0e16h/i3jgdt
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title: 80-5_0081.dcm
DOI: 10.7910/dvn/xnurhy/ro3onp
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DOI: 10.7910/dvn/51rile/b7377t
title: 2-manuscript_analysis.do

description: Analysis main text
DOI: 10.7910/dvn/51rile/txgfpq
title: 3-appendix_analysis.do

description: Analysis appendix
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title: 71-5_0164.dcm
DOI: 10.7910/dvn/8a9ruv/dauhtc
title: 60-1_0195.dcm
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DOI: 10.7910/dvn/suqc9n/diital
title: scripts.zip
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DOI: 10.7910/dvn/mq3kmd/kdmh4g
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DOI: 10.7910/dvn/nreove/uvbzvy
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DOI: 10.7910/dvn/ujdojm/0cjhax
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DOI: 10.7910/dvn/zdw1oh/crcn1p
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DOI: 10.7910/dvn/zdw1oh/ys4wjb
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DOI: 10.7910/dvn/8a9ruv/wioke4
title: 60-1_0203.dcm
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DOI: 10.7910/dvn/9cae6q/ikelvr
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DOI: 10.7910/dvn/c0spxf/hgzepr
title: 27-5_0030.dcm
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DOI: 10.7910/dvn/nreove/sougmb
title: 67-5_0157.dcm
DOI: 10.7910/dvn/o85klq/4zkip0
title: PhyloBayes_treelist_files_Dayhoff_M1.tar.gz

description: Treelist files from 2 PhyloBayes chains of the Matrix 1, dayhoff-recoded dataset. Original files are chain1.treelist and chain2.treelist. The other pairs of files each have one terminal removed. You can check topology convergence with: bpcomp -x 2000 10 chain1 chain2 (OR noCharonia_tritonis_chain1 noCharonia_tritonis_chain2). More information on the paper.
DOI: 10.7910/dvn/o85klq/8ozob0
title: Pipeline_Phylogenomics.html

description: Detailed pipeline with code to reproduce orthology assignment and phylogenomic analyses.
DOI: 10.7910/dvn/o85klq/glgyle
title: Gene_trees.tar.gz

description: Best RAxML gene tree from all 1059 genes.
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DOI: 10.7910/dvn/rmpvbc/wskul8
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DOI: 10.7910/dvn/rv2st9/zimini
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DOI: 10.7910/dvn/smknkw/7ovapv
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DOI: 10.7910/dvn/smknkw/rkenmt
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DOI: 10.7910/dvn/zdw1oh/abbvbo
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DOI: 10.7910/dvn/zdw1oh/d8a8yr
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DOI: 10.7910/dvn/zegu80/uxz9pm
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DOI: 10.7910/dvn/1sckwz/qvsblx
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DOI: 10.7910/dvn/1sckwz/rw5xgn
title: 132-5_0023.dcm
DOI: 10.7910/dvn/4cful7/0m96am
title: 57-1_0246.dcm
DOI: 10.7910/dvn/51rile/ab3obm
title: appendix_log.smcl

description: Log analysis appendix
DOI: 10.7910/dvn/51rile/bo4hum
title: datasetNZballot_Aug2017_prepared.tab

description: Dataset
DOI: 10.7910/dvn/51rile/hgtdop
title: manuscript_log.smcl

description: Log for analysis in main text
DOI: 10.7910/dvn/ajbmug/mot641
title: 72-5_0101.dcm
DOI: 10.7910/dvn/anooj5/jrq8tv
title: 129-5_0033.dcm
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DOI: 10.7910/dvn/o85klq/7hcunh
title: Pipeline_Transcriptome_Assembly.html

description: Detailed pipeline with code to reproduce assembly of transcriptomes.
DOI: 10.7910/dvn/o85klq/allbzd
title: README.txt

description: Read this for an explanation of the contents of this repository.
DOI: 10.7910/dvn/o85klq/aoxxfw
title: TreeFig_Astral_Heterogeneous.pdf

description: :unav
DOI: 10.7910/dvn/o85klq/fqt1rz
title: Table_S1.tab

description: Supplementary table with voucher information, library indexes and assembly statistics.
DOI: 10.7910/dvn/o85klq/hwdo7y
title: TreeFig_Astral_M1.pdf

description: :unav
DOI: 10.7910/dvn/pblpvl/1bvuxt
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DOI: 10.7910/dvn/pj6plg/ozzcsl
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DOI: 10.7910/dvn/qmdbv2/2lr19r
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DOI: 10.7910/dvn/s8efgu/br9zxa
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DOI: 10.7910/dvn/smknkw/xo3nnl
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DOI: 10.7910/dvn/sturfg/iylkzh
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DOI: 10.7910/dvn/sturfg/wli2qm
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DOI: 10.7910/dvn/tpegpa/yl1yv4
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DOI: 10.7910/dvn/u0e16h/r5kifb
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DOI: 10.7910/dvn/xnurhy/aatgo0
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DOI: 10.7910/dvn/zdw1oh/ambtke
title: 101-1_0174.dcm
DOI: 10.7910/dvn/51rile/zz2kbu
title: readme.pdf

description: Readme file
DOI: 10.7910/dvn/ajbmug/672mtf
title: 72-5_0102.dcm
DOI: 10.7910/dvn/ajbmug/taqpnj
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DOI: 10.7910/dvn/ajbmug/ucinfx
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DOI: 10.7910/dvn/ajbmug/xkzlii
title: 72-5_0104.dcm
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