cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7909236
title: Data for "A benchmark of computational pipelines for single-cell histone modification data"

description: The `time_features.txt` and `time_correct.txt` files contain the runtimes for the various embedding methods. The .csv files contain the computed scores (both supervised and unsupervised) for all the methods.
description: This data is also mirrored in the github repository (https://github.com/vallotlab/benchmark_scepigenomics) in the `data` and `log` folders
DOI: 10.6084/m9.figshare.22782881
title: Table S7.xlsx

description: Table S7. Relative fold changes of all metabolites in feces during each stage
DOI: 10.6084/m9.figshare.22782881.v1
title: Table S7.xlsx

description: Table S7. Relative fold changes of all metabolites in feces during each stage
DOI: 10.6084/m9.figshare.22782857
title: Table S5.xlsx

description: Table S5. Relative fold changes of all metabolites in serum during each stage
DOI: 10.6084/m9.figshare.22782857.v1
title: Table S5.xlsx

description: Table S5. Relative fold changes of all metabolites in serum during each stage
DOI: 10.6084/m9.figshare.22782890
title: LODES OD dataset

description: LODES OD dataset
DOI: 10.6084/m9.figshare.22782890.v1
title: LODES OD dataset

description: LODES OD dataset
DOI: 10.6084/m9.figshare.13506643
title: Diabetic cardiomyopathy attenuated the protective effect of ischaemic post-conditioning against ischaemia-reperfusion injury in the isolated rat heart model

description: The present study was designed to investigate the efficacy of post-conditioning (POC) in the diabetic heart with myopathy (DCM) against ischaemia-reperfusion (I/R) injury in an isolated rat heart model. Present work includes three groups of male Wistar rat viz., (i) normal, (ii) diabetes mellitus (DM) and (iii) DCM and each group was subdivided into normal perfusion, I/R, and POC. Isolated heart from the rats was analysed for tissue injury, contractile function, mitochondrial function, and oxidative stress. Results demonstrated that unlike in DM heart and normal heart, POC procedure failed to recover the DCM heart from I/R induced cardiac dysfunction (measured via cardiac hemodynamics and infarct size. POC was unsuccessful in preserving mitochondrial subsarcolemmal fraction during I/R when compared with DM and normal heart. To conclude, the development of myopathy in diabetic heart abolished the cardioprotective efficacy of POC and the underlying pathology was linked with the mitochondrial dysfunction.KEY MESSAGESEarly studies reported contradicting response of diabetic heart towards post-conditioning mediated cardioprotection.Deteriorated mitochondrial function underlines the failure of post-conditioning in DCM.Efficacy of cardioprotection depends on the varying pathology of different diabetes stages. Early studies reported contradicting response of diabetic heart towards post-conditioning mediated cardioprotection. Deteriorated mitochondrial function underlines the failure of post-conditioning in DCM. Efficacy of cardioprotection depends on the varying pathology of different diabetes stages.
DOI: 10.6084/m9.figshare.13506643.v1
title: Diabetic cardiomyopathy attenuated the protective effect of ischaemic post-conditioning against ischaemia-reperfusion injury in the isolated rat heart model

description: The present study was designed to investigate the efficacy of post-conditioning (POC) in the diabetic heart with myopathy (DCM) against ischaemia-reperfusion (I/R) injury in an isolated rat heart model. Present work includes three groups of male Wistar rat viz., (i) normal, (ii) diabetes mellitus (DM) and (iii) DCM and each group was subdivided into normal perfusion, I/R, and POC. Isolated heart from the rats was analysed for tissue injury, contractile function, mitochondrial function, and oxidative stress. Results demonstrated that unlike in DM heart and normal heart, POC procedure failed to recover the DCM heart from I/R induced cardiac dysfunction (measured via cardiac hemodynamics and infarct size. POC was unsuccessful in preserving mitochondrial subsarcolemmal fraction during I/R when compared with DM and normal heart. To conclude, the development of myopathy in diabetic heart abolished the cardioprotective efficacy of POC and the underlying pathology was linked with the mitochondrial dysfunction.KEY MESSAGESEarly studies reported contradicting response of diabetic heart towards post-conditioning mediated cardioprotection.Deteriorated mitochondrial function underlines the failure of post-conditioning in DCM.Efficacy of cardioprotection depends on the varying pathology of different diabetes stages. Early studies reported contradicting response of diabetic heart towards post-conditioning mediated cardioprotection. Deteriorated mitochondrial function underlines the failure of post-conditioning in DCM. Efficacy of cardioprotection depends on the varying pathology of different diabetes stages.
DOI: 10.6073/pasta/3e041d872ad30469e08d2352c5025bd5
title: PGT01 Konza prairie grass species trait

description: Evolutionary history plays a key role driving patterns of trait variation across plant species. For scaling and modeling purposes, grass species are typically organized into C3 versus C4 plant functional types (PFTs). PFT groupings may obscure important functional differences among species. Rather, grouping grasses by evolutionary lineage may better represent grass functional diversity. We measured 11 structural and physiological traits in situ from 75 grass species within the North American tallgrass prairie. We tested whether traits differed significantly among photosynthetic pathways or lineages (tribe) in annual and perennial grass species. We hypothesized that tribe would be the best predictor of traits, more so than photosynthetic pathway. We further hypothesized that there would be substantial variation of traits in species among the seven C4 lineages represented at our site.
DOI: 10.5519/qd.8p9kafi8
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2295 records)
DOI: 10.5517/ccdc.csd.cc29llp6
title: CCDC 2133038: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29llm4
title: CCDC 2133036: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29lln5
title: CCDC 2133037: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29llq7
title: CCDC 2133039: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29llr8
title: CCDC 2133040: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29lls9
title: CCDC 2133041: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29lltb
title: CCDC 2133042: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c81d3
title: CCDC 2182474: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c81f4
title: CCDC 2182475: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c81g5
title: CCDC 2182476: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c81h6
title: CCDC 2182477: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c81j7
title: CCDC 2182478: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c81k8
title: CCDC 2182479: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c81l9
title: CCDC 2182480: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c81nc
title: CCDC 2182482: Experimental Crystal Structure Determination

description: Related Article: John S. Wenger, Monica Weng, Graham N. George, Timothy C. Johnstone |2023|Nature Chemistry|15|633|doi:10.1038/s41557-023-01160-x
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7897248
title: Global Earth Mineral Inventory Data Dump

description: Contains data dumps of various versions of the Global Earth Mineral Inventory (GEMI) - One of the Deep carbon observatory data legacies.
DOI: 10.5281/zenodo.7897247
title: Global Earth Mineral Inventory Data Dump

description: Contains data dumps of various versions of the Global Earth Mineral Inventory (GEMI) - One of the Deep carbon observatory data legacies.
DOI: 10.6073/pasta/3413cfa8e32ea291a393e4846145d4f9
title: SBC LTER: Settlement of urchins and other invertebrates, ongoing since 1990

description: The dataset comprises weekly to biweekly data on invertebrate settlement on artificial substrates at six sites in Southern California, and one site in Northern California. The study began in early 1990 and is ongoing. The study’s main focus is on urchins (Strongylocentrotus purpuratus and Mesocentrotus franciscanus), but was expanded to include selected bivalves, gastropods and crabs during the period 1994-1997. The purpose of the study is to compare and contrast patterns of settlement supply across a large geographical gradient to explore the possible influence of oceanographic features on these patterns. Both of these goals are facilitated by the long duration of the dataset, its large geographical range and the high temporal frequency of collection. See Methods for more information.
DOI: 10.5281/zenodo.7909267
title: Dataset for User Preference Optimization for Control of Ankle Exoskeletons using Sample Efficient Active Learning

description: Dataset for User Preference Optimization for Control of Ankle Exoskeletons using Sample Efficient Active Learning
DOI: 10.5281/zenodo.7909268
title: Dataset for User Preference Optimization for Control of Ankle Exoskeletons using Sample Efficient Active Learning

description: Dataset for User Preference Optimization for Control of Ankle Exoskeletons using Sample Efficient Active Learning
DOI: 10.5281/zenodo.7909287
title: Dataset for User Preference Optimization for Control of Ankle Exoskeletons using Sample Efficient Active Learning

description: Dataset for User Preference Optimization for Control of Ankle Exoskeletons using Sample Efficient Active Learning
DOI: 10.5281/zenodo.7909294
title: Mantle xenoliths used in "High P-T sound velocities of amphiboles: Implications for low-velocity anomalies in metasomatized upper mantle"

description: Mineral proportions in hydrous-mineral-bearing mantle xenoliths collected worldwide and their calculated sound velocities in this study.
DOI: 10.5281/zenodo.7909293
title: Mantle xenoliths used in "High P-T sound velocities of amphiboles: Implications for low-velocity anomalies in metasomatized upper mantle"

description: Mineral proportions in hydrous-mineral-bearing mantle xenoliths collected worldwide and their calculated sound velocities in this study.
DOI: 10.34740/kaggle/dsv/5637093
title: Find Gamma particles in Magic Telescope
DOI: 10.13012/b2idb-1549958_v1
title: Microclimate Species Distribution Models for Plethodontid Salamanders in Great Smoky Mountains National Park

description: This dataset includes microclimate species distribution models at a ~3 m2 spatial resolution and free-air temperature species distribution models at ~0.85 km2 spatial resolution for three plethodontid salamander species (Demognathus wrighti, Desmognathus ocoee, and Plethodon jordani) across Great Smoky Mountains National Park. We also include heatmaps representing the differences between microclimate and free-air species distribution models and polygon layers representing the fragmented habitat for each species' predicted range. All datasets include predictions for 2010, 2030, and 2050.
DOI: 10.6073/pasta/2d2145348ac4da42471dd74c8659fd4e
title: PBG06 Cattle grazing and cattle performance in the Patch-Burn Grazing experiment at Konza Prairie

description: PBG datasets are associated with a long-term, large-scale study that is addressing the effects of fire-grazing interactions in the context of a Patch-Burn Grazing management system designed to promote grassland heterogeneity. Effects of patch-burn grazing management on plant and animal diversity and the nature and variety of wildlife habitat are being assessed in two replicate management units, each consisting of three pastures (watersheds) designated C03A/C03B/C03C and C3SA/C3SB/C3SC. In each patch-burn grazing unit, one watershed is burned and two that are left unburned in a given year. The burning treatments are rotated annually so that each pasture is burned every third year. Each patch-burn grazing unit is paired with an annually-burned pasture for comparison with traditional grazing systems (C01A and C1SB). All grazing units are stocked with cow/calf pairs from approximately 1 May until 1 Oct at a stocking density equal to 3.2 ha per cow/calf. To examine the impact of patch burning and grazing in all 8 units, we monitor changes in plant species composition, residual biomass, grassland bird populations, insect populations, small mammal populations, soil nutrients, and stream water quality1 (1C3SA/C3SB/C3SC unit only). The KSU Department of Animal Science monitors cattle performance, including weight gain and body condition to assess the economic feasibility of using patch-burn management on a widespread basis. This data set focuses on monitoring (1) the dynamics of cattle grazing on each of two sets of three pastures burned each year on a rotating basis and (2) cattle performance including cow weight gain, body condition, and reproductive performance and calf weight gains.
DOI: 10.3886/e183121v1-138400
title: Data and Code for: The Impact of COVID-19 on Access to Mental Healthcare Services

description: The COVID-19 pandemic increased the rate of mental health disorders, as well as demand for mental health services. It remains unclear, however, the extent to which the pandemic impacted access to mental health services. Using data from an audit field experiment, we examine the impact of COVID-19 on access to mental health care appointments in the United States. This experiment ran from January to May 2020 and overlapped with the initial onset of the COVID-19 pandemic.<br><br><br><br><br>
description: Response Rates: We sent 1 message to 1000 mental health practitioners.We received 755 response messages.<br>
description: In order to be included in our sample, a mental health practitioner (MHP) must: 1. must not specialize exclusively on specific types of patients who are outside of the scope of our experiment (e.g., children, or couples therapy; 2. must not be specialized in a type of therapy (e.g., grief, domestic violence) that would not deal with the common mental health condition; 3. must list an individual's profile (e.g., it cannot be the profile of a clinic); 4. must provide an option to email them through a web form; 5. must be accepting patients (i.e., we do not contact MHPs that indicate that they are not currently accepting patients). <br>After accounting for these characteristics, we select MHPs proportionately to state populations; specifically, we divide states in terciles, based on their population. <br> Within states, we select MHPs proportionally to the population of each ZIP code such that our final sample is nationally representative. <br>
description: Mental health practitioners across the US<br>. Smallest Geographic Unit: State
description: other;
DOI: 10.5281/zenodo.7849452
title: HiPACE++ input scripts for "Temperature effects in plasma-based positron acceleration schemes using electron filaments"

description: This dataset presents the HiPACE++ input scripts required to re-create the data of the figures in the article "Temperature effects in plasma-based positron acceleration schemes using electron filaments" by S. Diederichs, C. Benedetti, M. Thévenet, A. Sinn, E. Esarey, J. Osterhoff, and C. B. Schroeder.
DOI: 10.5281/zenodo.7849453
title: HiPACE++ input scripts for "Temperature effects in plasma-based positron acceleration schemes using electron filaments"

description: This dataset presents the HiPACE++ input scripts required to re-create the data of the figures in the article "Temperature effects in plasma-based positron acceleration schemes using electron filaments" by S. Diederichs, C. Benedetti, M. Thévenet, A. Sinn, E. Esarey, J. Osterhoff, and C. B. Schroeder.
DOI: 10.6084/m9.figshare.22783004
title: LODES OD dataset (sample)

description: LODES dataset