cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21227/cy3f-xb74
title: Map Matching Dataset

description: The GPS track data comes from the open datasets provided by Open ITS Open Alliance, and two open datasets provided by this organization are used in the experiment. The GPS track dataset1 was collected from the experimental road near Zhongshan University in Guangzhou, China, and dataset2 is located in the north-central region of Dongguan, China. The original GPS data contains several sampling frequencies (time intervals), from 10s - 360s. The city road network data used in the experiment is derived from the wiki map of the open-source project OSM. The city road network data within the corresponding latitude and longitude range are extracted according to the area where the GPS track is located.
DOI: 10.6084/m9.figshare.24192198
title: Untargeted metabolomics analysis based on HFCS-induced colitis

description: <b>Untargeted metabolomics analysis</b>
DOI: 10.6084/m9.figshare.24192198.v1
title: Untargeted metabolomics analysis based on HFCS-induced colitis

description: <b>Untargeted metabolomics analysis</b>
DOI: 10.5519/qd.yjiijvph
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (26 records)
DOI: 10.5519/qd.fb6hz0io
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (7 records)
DOI: 10.5519/qd.c9cylc9k
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.5519/qd.h1ro5rsd
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3 records)
DOI: 10.6084/m9.figshare.16529574
title: An updated checklist of quill mites of the family Syringophilidae (Acariformes: Prostigmata)

description: <b>Objectives:</b>This work aims to create and maintain an updated checklist of the family Syringophilidae quill mites. This checklist provides information on their taxonomy, avian host species, geographical distribution, and literature references. The main drive for the continuation of this project is to provide a centralised data hub for researchers, academicians, and amateur and professional enthusiasts, enabling informed scientific discourse and collaborative investigation. Easily accessible information may assist in framing study results and writing research paper manuscripts.<b>Methods:</b>The checklist is curated and successively compiled through a review of newly published literature trying to reach the primary references. The data is presented in structured, related spreadsheets combined into one file and periodically updated to reflect the latest discoveries and taxonomic revisions and add new functionality features.<b>Data repository:</b>The checklist is published on figshare.com as its current official source, an open-access digital repository, ensuring unrestricted access to the scientific community and the broader public. The data is available for download as a Microsoft Excel Spreadsheet Workbook file (.xlsx), with an additional option, an Open Document Spreadsheet (.ods) file to promote Free and Open Source Software.<b>Accessibility:</b>The checklist will undergo annual updates to encapsulate new findings and taxonomic adjustments. Although previous versions of this checklist were hosted at https://sites.google.com/site/syringophilidae/, this website has been deprecated, and no further updates will be published there. The move to figshare.com heralds a commitment to enhance accessibility and ensure the data remains long-standing and up-to-date, fostering broader knowledge regarding the Syringophilidae family.<b>Recent changes:</b>The latest edition of the checklist incorporates new taxa, applies over a dozen corrections, and updates the Latin names of bird host species and their systematic classification in line with recent updates (October 2022) to the Clements Checklists of birds. Additionally, a novel spreadsheet delineating the classification of syringophilids has been introduced, enriching the breadth and depth of information available within this repository.<b>Future challenges:</b>Future enhancements will include integrating references linked to each record, expanding file type availability (for example, an HTML file(s) as an additional backup of gathered information), and better formatting for various analytic tools.
DOI: 10.5519/qd.zqk7l20e
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3 records)
DOI: 10.5519/qd.avudcj60
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3 records)
DOI: 10.5519/qd.3714xq5z
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (12 records)
DOI: 10.5519/qd.ppuh0lqe
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2 records)
DOI: 10.5519/qd.6oissyv8
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2 records)
DOI: 10.5519/qd.u9703a2z
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4 records)
DOI: 10.5519/qd.rf3ty6ya
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (5 records)
DOI: 10.6084/m9.figshare.24277990
title: <b>PRISMA_2020_checklist.docx</b>

description: PRISMA checklist for SYSTEMATIC REVIEW ON NEXT_GENERATION SEQUENCING OF MICROBES ISOLATED FROM CULTURED SPECIES
DOI: 10.15151/esrf-es-1299128300
title: Heidelberg BAG (HeidelBAG)

description: The HeidelBAG unites macromolecular crystallography of EMBL Heidelberg and the Heidelberg University Biochemistry Center (BZH). Central to all projects are large assemblies involved in chromosome organization and transcription control, in nuclear and cytoplasmic RNA regulation and modification, in translational control by ribosome associated factors or further in protein targeting, membrane protein insertion or post-translational modification. While O. Barabas from EMBL has left the BAG, Svetlana Dodonova and Sebastian Eustermann at EMBL will join and add projects on chromatin organization. Nearly all projects make use of integrated structural biology techniques (MX, SAXS/SANS, NMR, cryo-EM, AI approaches) that are combined with complementary methods, a strategy that warranties the continuous success of the BAG. More and more the detailed architecture and mechanistic description of entire macromolecular machines come into focus. The BAG reports on 17 publications and 30 PDB entries.
DOI: 10.15151/esrf-es-1352301595
title: Comparison of human and animal organs

description: Organ morphology varies accross species, not only in size but also in presence of specific anatomical features. The protocols developed through the Human Organ Atlas Hub will be used to Investigate these variations and how they relate to the specific species' context. This will provide insights into basic anatomy and how animal tissue could eventually be used in treatment/surgery strategies.
DOI: 10.15151/esrf-es-1300764591
title: ITABAG: 3D structures of macromolecules related to human health

description: The ITABAG includes structural biologists from Universities, the National Research Council and Hospital research centres in Italy. The laboratories take advantage of single crystal and small angle X-ray diffraction methods to study the structure-function relationships in various macromolecules. A unifying factor for the vast majority of the macromolecules under study is that they are related to human health, either directly, being human proteins involved in some disease, or indirectly, as proteins expressed by human pathogens and validated as potential pharmacological targets. Other projects investigate basic chemical processes, such as crystal growth, or aim at characterising macromolecules with potential biotechnological applications.
DOI: 10.15151/esrf-es-1340486122
title: Cryo-trapping intermediate states in the CarH photoreceptor

description: CarH is a vitamin B12-dependent photoreceptor protein that binds to operator DNA in a tetrameric complex to inhibit gene expression. The tetramer is stable in dark conditions, while exposure to light induces tetramer dissolution and dissociation from DNA, thus allowing gene expression. The suppressed gene controls the biosynthesis of carotenoids that protects bacteria from excess of sunlight (Jost et al., 2015). CarH’s dissociation mechanism has been studied by time-resolved transient absorption spectroscopy. Two photoreaction pathways have been proposed, providing insight into a number of intermediates formed during the dissociation process (Kutta et al., 2015 ; Miller et al., 2020). In both mechanisms the cobalt (Co) atom contained in the corrin of the B12 moiety plays the most important role by sensing light. Co’s redox photodynamics involves the transient formation of intermediate states that result in CarH tetramer dissociation.
DOI: 10.15151/esrf-es-1345498606
title: Observation of crack patterns in IN718 samples submitted to accelerated stress corrosion cracking tests

description: Observation of crack patterns in IN718 samples submitted to accelerated stress corrosion cracking tests
DOI: 10.15151/esrf-es-1313213554
title: Three-dimensional strain fields in realistic qubit devices

description: Electron spin qubits in Si1-xGex/Si/Si1-xGex heterostructures are based on quantum dots (QDs) defined by the strain of the Si quantum well (QW) plus electrostatic gates. Spin coherent shuttling over several microns is possible by applying time-dependent waveforms to the gates. Strain fluctuations on the 100 nm level deteriorate the uniformity of electron potential and may lead to decoherence. As shown by non-destructive nano-beam XRD measurements, a significant source of strain is the stress exerted by the gate electrodes themselves. Here, we propose to use coherent Bragg diffraction to further enhance the resolution and thus be able to investigate real shuttling devices (“QuBus”) with structure sizes smaller than the nano-beam. This will involve focused ion beam (FIB) preparation to provide samples of optimal size for coherent diffraction.
DOI: 10.15151/esrf-es-1313214858
title: X-Ray fluorescence ghost tomography

description: X-ray fluorescence computed tomography (XRF-CT) is an important imaging technique that provides three-dimensional chemical maps. It can be used in many fields for example, to study the distribution of trace elements in biological tissues, to map the distribution of metal ions in materials, or to study the distribution of contrast agents in medical imaging. Despite its success XRF-CT faces several challenges related to the requirement to focus the incident beam and raster scan the sample. We propose to exploit an innovative approach known as Ghost Imaging for XRF-CT that eliminates the need for raster scanning the sample and that can be used as a full field imaging method. This approach has several advantages including (a) a significant reduction in the measurement time or deposited dose, (b) measuring more complex samples and at higher resolutions compared to present-day techniques, (c) higher tolerance to positioning drifts.
DOI: 10.15151/esrf-es-1312445995
title: Study of the influence of stretching on the macromolecular dynamics of polylactide by means of Xray Photon Correlation Spectroscopy (XPCS)

description: It is know well known that the structural evolution of a thermoplastic polymer upon stretching is closely linked with the stretching conditions (i.e. stretching temperature and speed). Former studies carried out by our group have shown that the nature of the strain-induced phase (i.e. cristalline, mesomorphic...) is also related to the macromolecular dynamics into the material and that relationships exist between these characteristic relaxation times, the nature of the strain-induced phase and the stretching conditions. However, up to now the determination of the macromolecular dynamics, in situ upon stretching, remains a challenge. The goal of this work is thus to measure the influence of orientation on the macromolecular dynamics of a polymer upon stretching, in situ, using the XPCS technique (which is one of the few allowing such measurements) in order to definitely confirm the relationships existing between the macromolecular dynamics and the nature of the strain induced-phase
DOI: 10.15151/esrf-es-1312448316
title: Development of a laser-driven dynamic compression platform on ID09 to perform ps time resolved X-ray diffraction pump probe experiments at h

description: This LTP aims at setting a laser-driven dynamic compression platform on ID09 in order to perform ps time resolved X-ray diffraction pump probe experiments at high pressure. A 5J laser driver and a point VISAR/PDV diagnostic will be provided to generate the shock compression in materials and characterize their thermodynamic states by velocimetry measurements. With this new high power laser system, pressures in the 100 GPa range could then be generated, an order of magnitude higher than what can be presently achieved on ID09. Over the three years of the LTP, this dynamic compression platform will be mounted, interfaced with the synchrotron beam, tested and made user friendly so that other groups interested by Xray structural studies of matter under dynamical compression could use it. It seems a necessary step to aggregate a community able to make the scientific case for building an XRD station near the High Power Laser Facility (HPLF) of ESRF in the near future.
DOI: 10.6084/m9.figshare.24278074
title: <b>Clinical effect observation of apatinib combined with 131I for radioiodine-refractory differentiated thyroid cancer and prognostic significance analysis of MIP-1α after treatment</b>

description: One hundred and six patients with RAIR-DTC admitted to our hospital from January 2019 to October 2020 were selected for the study. All the patients were treated with TC surgery with 131I at our hospital, and 58 of them were subsequently transferred to AP treatment, which was considered as the research group; the other 48 patients were transferred to TSH suppression treatment, which was considered as the control group.
DOI: 10.6084/m9.figshare.24278074.v1
title: <b>Clinical effect observation of apatinib combined with 131I for radioiodine-refractory differentiated thyroid cancer and prognostic significance analysis of MIP-1α after treatment</b>

description: One hundred and six patients with RAIR-DTC admitted to our hospital from January 2019 to October 2020 were selected for the study. All the patients were treated with TC surgery with 131I at our hospital, and 58 of them were subsequently transferred to AP treatment, which was considered as the research group; the other 48 patients were transferred to TSH suppression treatment, which was considered as the control group.
DOI: 10.6084/m9.figshare.24042843
title: One-year dataset of hourly air quality parameters from 100 air purifiers used in China residential buildings

description: Household air purifiers have been widely used as an effective approach to improving indoor air quality. Air purifiers can automatically record indoor air quality parameters, providing valuable data resources for in-depth data-driven analysis. This work presents a one-year hourly indoor air quality dataset collected by household air purifiers in 100 residential homes in 18 provinces across 4 different climate zones in China. The data were collected from July 1, 2021, to July 1, 2022. The concentrations of formaldehyde, PM<sub>2.5</sub>, TVOC, temperature, relative humidity, on/off status and the airflow rate of air purifiers during operations were recorded hourly.
DOI: 10.6084/m9.figshare.24042843.v5
title: One-year dataset of hourly air quality parameters from 100 air purifiers used in China residential buildings

description: Household air purifiers have been widely used as an effective approach to improving indoor air quality. Air purifiers can automatically record indoor air quality parameters, providing valuable data resources for in-depth data-driven analysis. This work presents a one-year hourly indoor air quality dataset collected by household air purifiers in 100 residential homes in 18 provinces across 4 different climate zones in China. The data were collected from July 1, 2021, to July 1, 2022. The concentrations of formaldehyde, PM<sub>2.5</sub>, TVOC, temperature, relative humidity, on/off status and the airflow rate of air purifiers during operations were recorded hourly.
DOI: 10.6084/m9.figshare.24042843.v4
title: One-year dataset of hourly air quality parameters from 100 air purifiers used in China residential buildings

description: Household air purifiers have been widely used as an effective approach to improving indoor air quality. Air purifiers can automatically record indoor air quality parameters, providing valuable data resources for in-depth data-driven analysis. This work presents a one-year hourly indoor air quality dataset collected by household air purifiers in 100 residential homes in 18 provinces across 4 different climate zones in China. The data were collected from July 1, 2021, to July 1, 2022. The concentrations of formaldehyde, PM<sub>2.5</sub>, TVOC, temperature, relative humidity, on/off status and the airflow rate of air purifiers during operations were recorded hourly.
DOI: 10.6084/m9.figshare.22297978.v2
title: Data source for Cui GCB 2023

description: Dtaset for "Nitrogen use strategy drives interspecific differences in plant photosynthetic CO2 acclimation"
DOI: 10.6084/m9.figshare.8869190
title: Genetic basis of improving the palatability of beef cattle: current insights

description: Beef palatability is a complex concept and could be described through an array of features such as tenderness, juiciness and flavor traits. Improving the eating experience when consuming beef and the ability to accurately inform the consumers of the expected eating quality when the product is purchased are critical challenges. In this review, we discuss the current knowledge of quantitative and molecular genetic aspects of palatability and discuss implications of genetic manipulation for the cattle industry.
DOI: 10.6084/m9.figshare.8869190.v1
title: Genetic basis of improving the palatability of beef cattle: current insights

description: Beef palatability is a complex concept and could be described through an array of features such as tenderness, juiciness and flavor traits. Improving the eating experience when consuming beef and the ability to accurately inform the consumers of the expected eating quality when the product is purchased are critical challenges. In this review, we discuss the current knowledge of quantitative and molecular genetic aspects of palatability and discuss implications of genetic manipulation for the cattle industry.
DOI: 10.6084/m9.figshare.24276895
title: Chromosome-level genome assembly of Sogatella furcifera

description: Sogatella furcifera is a destructive agricultural pest causing large threats to rice production in China and Southeast Asian countries. Despite recent breakthroughs in long-read sequencing, high quality genomic data are very limited in S. furcifera. In present study, a chromosome-level assembly of the S. furcifera genome was completed (0.64 GB), comprising 15 chromosomes covered 95.04% of the estimated genome size, along with other 624 small scaffolds making up the remaining 4.96% of the genome of S. furcifera.
DOI: 10.26165/juelich-data/ifd1i9
title: Experimental data for: Retention of 226Ra in the sandy Opalinus Clay facies from the Mont Terri rock laboratory, Switzerland

description: In this study, we report results of the impact of the natural heterogeneity of sandy facies of the Opalinus clay (OPA-SF) on 226Ra uptake in drill core (BAD 1) samples from the Mont Terri underground rock laboratory. The samples were carefully characterized with respect to mineralogy and chemistry using, e.g., XRD and SEM/EDS. The uptake behaviour of 226Ra is evaluated using batch sorption experiments. This dataset contains experimental data on a) 226Ra sorption kinetics and 226Ra sorption on sandy Opalinus Clay as a function of the S/L ratio, b) the characterization of the mineralogical composition of rock samples and the different pore-waters in equilibrium with each clay sample, c) a representation of the mineralogical composition of rock samples in a ternary diagram QFM (quartz, feldspar, and mica), and d) calculated speciation of 226Ra and saturation indices (SI) for Ra-phases in synthetic Opalinus Clay pore water and predicted mole fractions of BaSO4 and SrSO4 in (Sr,Ba)SO4 celestine solid solutions.
DOI: 10.5281/zenodo.8318287
title: Zambia land use and land cover field samples

description: <strong>General Description</strong> This data set consists of 697 land use and land cover (LULC) sample locations and reference labelling collected over Muchinga and Copperbelt provinces, Zambia. The data available in ESRI shapefile format (spatial reference system: WGS 84, EPSG: 4326) was collected in a field campaign realized between May and June 2023. The dataset can be used for training and to evaluate the performance of the classification models. <strong>Land Use and Land Cover Classes</strong> The five LULC classes collected are: Label Code Forest land 1 Cropland 2 Grassland 3 Wetland 4 Other land 5 <strong>Data set Details</strong> <strong>Time period:</strong> May / June 2023 <strong>Type of data:</strong> land use and land cover samples <strong>How the data was collected:</strong> KoboCollect app <strong>Coordinate reference system:</strong> EPSG:4326 <strong>Bounding box (Xmin, Ymin, Xmax, Ymax):</strong> (27.5472562965098682,-13.8722138995139996 : 32.0291093994995890,-11.2161515458659427) <strong>File format:</strong> shapefile
DOI: 10.5281/zenodo.8318286
title: Zambia land use and land cover field samples

description: <strong>General Description</strong> This data set consists of 697 land use and land cover (LULC) sample locations and reference labelling collected over Muchinga and Copperbelt provinces, Zambia. The data available in ESRI shapefile format (spatial reference system: WGS 84, EPSG: 4326) was collected in a field campaign realized between May and June 2023. The dataset can be used for training and to evaluate the performance of the classification models. <strong>Land Use and Land Cover Classes</strong> The five LULC classes collected are: Label Code Forest land 1 Cropland 2 Grassland 3 Wetland 4 Other land 5 <strong>Data set Details</strong> <strong>Time period:</strong> May / June 2023 <strong>Type of data:</strong> land use and land cover samples <strong>How the data was collected:</strong> KoboCollect app <strong>Coordinate reference system:</strong> EPSG:4326 <strong>Bounding box (Xmin, Ymin, Xmax, Ymax):</strong> (27.5472562965098682,-13.8722138995139996 : 32.0291093994995890,-11.2161515458659427) <strong>File format:</strong> shapefile