cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc1pmycm
title: CCDC 1568301: Experimental Crystal Structure Determination

description: Related Article: Mary E. Garner, Trevor D. Lohrey, Stephan Hohloch, John Arnold|2017|J.Organomet.Chem.|857|10|doi:10.1016/j.jorganchem.2017.09.006
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1pmydn
title: CCDC 1568302: Experimental Crystal Structure Determination

description: Related Article: Mary E. Garner, Trevor D. Lohrey, Stephan Hohloch, John Arnold|2017|J.Organomet.Chem.|857|10|doi:10.1016/j.jorganchem.2017.09.006
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15129/d9b3e5f1-8498-48e1-a1e7-f3db90910801
title: Data for "Predicting Ground Motion from Induced Earthquakes in Geothermal Areas"

description: Observed horizontal response spectral accelerations used to develop ground motion prediction equations published in this article by Douglas et al. (2013) as a zip file (both the files corrected and not corrected for site response are provided)
DOI: 10.17632/n8827ssnv7.2
title: A spatio-temporal dataset of forest mensuration for the analysis of tree species structure and diversity in semi-natural mixed floodplain forests

description: We performed replicated, repeated-measures data of height, diameter and vitality at tree level to allow analysis of spatial and temporal structure and diversity in a semi-natural mixed floodplain forest in Italy. Three inventories were performed in 1995, 2005 and 2016 in three ~1 ha plots with varying soil moisture regimes. The use of replicated, repeated-measures data rather than chronosequences allows the examination of true changes in spatial pattern processes through time in this forest type.
DOI: 10.17632/nmpxg8z5mb.1
title: Dataset for "Collision of two action potentials in a single excitable cell"

description: This data set contains electrophysiological recordings from excitable plant cells (Chara Braunii). The experiments were conducted in order to understand if two action potentials penetrate or annihilate when they meet head on. A short description of the data including plotted measurements (controls and collision experiments) is provided in the file "1_data_overview.pdf". The raw data are contained in "1_raw_data.zip".
DOI: 10.17632/pp282j4h29.2
title: Golgi_HCS_Data_Analysis_Tool

description: The data consists of a Golgi image dataset and the pipeline to perform unsupervised phenotypic analysis on these images. The data is presented as a zipped file ‘Golgi_HCA_workflow.zip’ and its contents include: 1) Data folder ‘snare_2’ containing vignettes of Golgi images (.jpg) acquired from multiple fields of multiple wells and numerical data (.sta) corresponding to the image features extracted for each Golgi image. 2) Plate map folder ‘plate_maps’ containing the .csv plate map file for ‘snare_2’ dataset with the well locations for all the siRNA treatments. 3) Repository folder ‘repository’ containing ‘nqc.h5’. A labeled set of good and bad nuclei was used to train the nuclei quality control (NQC) classifier. The results of this pre-trained classifier have been included in ‘nqc.h5’ for convenience of users. 4) Two Python scripts ‘control_model_utils.py’ for the control modeling module of the pipeline and 'HCA_workflow.py’ is the main script for running the entire pipeline. 5) README file describing the steps to download and install this package and the Python software needed to run it.
DOI: 10.17632/8v6y744r3t.1
title: Temperature-Sensitive Substrate and Product Binding Underlie Temperature-Compensated Phosphorylation in the Clock

description: Raw images of SDS-PAGE analysis: purified budding yeast CKI homolog 1 (Figure S8B); purified wild-type TTBK1 (WT) and rationally designed TTBK1 mutant (rMT) (Figure S10B).
DOI: 10.5517/ccdc.csd.cc1ptfwt
title: CCDC 1573587: Experimental Crystal Structure Determination

description: Related Article: Jan Grzegorz Malecki|2017|CSD Communication|||
description: Related Article: Sonia Kotowicz, Danuta Sęk, Sławomir Kula, Aleksandra Fabiańczyk, Mariola Siwy, Michał Filapek, Agata Szłapa-Kula, Jan Grzegorz Małecki, Martin Jonsson-Niedziółka, Joanna Niedziółka-Jonsson, Karolina Smolarek, Sebastian Maćkowski, Ewa Schab-Balcerzak|2018|J.Lumin.|203|455|doi:10.1016/j.jlumin.2018.06.071
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.887617
title: Ensembl R88 Saccharomyces Cerevisia Linksets

description: Ensembl Saccharomyces Cerevisia LinkSets

Gene - Transcript - Protein
DOI: 10.5281/zenodo.887350
title: Md Simulation Trajectory Of A Popc Bilayer With 100Mm Cacl2, Berger Force Field For Lipids, Scaled Charges For Ca2+ And Cl-

description: MD simulation trajectory of a POPC bilayer with 100 mM CaCl2 (128 POPC, 26 POPS, 4452 WAT, 8 Ca2+, 16 Cl-). Berger force field for lipids, scaled charges employed for calcium and chloride ions. Gromacs 4.5.5, T=310K, 200 ns trajectories were calculated with the last 100 ns stored here).

Used in (see therein also a detailed description of ion scaling):

A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers<br>
Scientific Reports 2016, 6, 38035.<br>
DOI: 10.1038/srep38035
description: {"references": ["P. Jurkiewicz, L. Cwiklik, A. Vojtiskova, P. Jungwirth, M. Hof, Structure, Dynamics, and Hydration of POPC/POPS Bilayers Suspended in NaCl, KCl, and CsCl  BBA Biomembranes 2012, 1818, 609-616. DOI: 10.1016/j.bbamem.2011.11.033"]}
DOI: 10.5281/zenodo.887351
title: Md Simulation Trajectory Of A Popc Bilayer With 100Mm Cacl2, Berger Force Field For Lipids, Scaled Charges For Ca2+ And Cl-

description: MD simulation trajectory of a POPC bilayer with 100 mM CaCl2 (128 POPC, 26 POPS, 4452 WAT, 8 Ca2+, 16 Cl-). Berger force field for lipids, scaled charges employed for calcium and chloride ions. Gromacs 4.5.5, T=310K, 200 ns trajectories were calculated with the last 100 ns stored here).

Used in (see therein also a detailed description of ion scaling):

A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers<br>
Scientific Reports 2016, 6, 38035.<br>
DOI: 10.1038/srep38035
description: {"references": ["P. Jurkiewicz, L. Cwiklik, A. Vojtiskova, P. Jungwirth, M. Hof, Structure, Dynamics, and Hydration of POPC/POPS Bilayers Suspended in NaCl, KCl, and CsCl  BBA Biomembranes 2012, 1818, 609-616. DOI: 10.1016/j.bbamem.2011.11.033"]}
DOI: 10.5281/zenodo.887616
title: Ensembl R88 Saccharomyces Cerevisia Linksets

description: Ensembl Saccharomyces Cerevisia LinkSets

Gene - Transcript - Protein
DOI: 10.5281/zenodo.887395
title: Md Simulation Trajectory Of A Popc Bilayer With 716Mm Cacl2, Berger Force Field For Lipids, Scaled Charges For Ca2+ And Cl-

description: MD simulation trajectory of a POPC bilayer with 716 mM CaCl2 (128 POPC, 26 POPS, 4308 WAT, 56 Ca2+, 112 Cl-). Berger force field for lipids, scaled charges employed for calcium and chloride ions. Gromacs 4.5.5, T=310K, 200 ns trajectories were calculated with the last 100 ns stored here.

Used in (see therein also a detailed description of ion scaling):

A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers<br>
Scientific Reports 2016, 6, 38035.<br>
DOI: 10.1038/srep38035
description: {"references": ["A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers Scientific Reports 2016, 6, 38035. DOI: 10.1038/srep38035"]}
DOI: 10.5281/zenodo.887396
title: Md Simulation Trajectory Of A Popc Bilayer With 716Mm Cacl2, Berger Force Field For Lipids, Scaled Charges For Ca2+ And Cl-

description: MD simulation trajectory of a POPC bilayer with 716 mM CaCl2 (128 POPC, 26 POPS, 4308 WAT, 56 Ca2+, 112 Cl-). Berger force field for lipids, scaled charges employed for calcium and chloride ions. Gromacs 4.5.5, T=310K, 200 ns trajectories were calculated with the last 100 ns stored here.

Used in (see therein also a detailed description of ion scaling):

A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers<br>
Scientific Reports 2016, 6, 38035.<br>
DOI: 10.1038/srep38035
description: {"references": ["A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers Scientific Reports 2016, 6, 38035. DOI: 10.1038/srep38035"]}
DOI: 10.5281/zenodo.887398
title: Md Simulation Trajectory Of A Popc/Pops (4:1) Bilayer With 102Mm Cacl2, Berger Force Field For Lipids, Scaled Charges For Ca2+ And Cl-

description: MD simulation trajectory of a POPC/POPS (4:1) bilayer with 102 mM CaCl2 (104 POPC, 24 POPS, 26 POPS, 4306 WAT, 24 Ca2+, 16 Cl-). Additional Ca2+ cations added to neutralize the negative charge of POPS (leading to total Ca2+ concentration of 306 mM). Berger force field for lipids, scaled charges employed for calcium and chloride ions. Gromacs 4.5.5, T=310K, 300 ns trajectories were calculated with the last 100 ns stored here.

Used in (see therein also a detailed description of ion scaling):

A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers<br>
Scientific Reports 2016, 6, 38035.<br>
DOI: 10.1038/srep38035
description: {"references": ["A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers Scientific Reports 2016, 6, 38035. DOI: 10.1038/srep38035"]}
DOI: 10.5281/zenodo.887397
title: Md Simulation Trajectory Of A Popc/Pops (4:1) Bilayer With 102Mm Cacl2, Berger Force Field For Lipids, Scaled Charges For Ca2+ And Cl-

description: MD simulation trajectory of a POPC/POPS (4:1) bilayer with 102 mM CaCl2 (104 POPC, 24 POPS, 26 POPS, 4306 WAT, 24 Ca2+, 16 Cl-). Additional Ca2+ cations added to neutralize the negative charge of POPS (leading to total Ca2+ concentration of 306 mM). Berger force field for lipids, scaled charges employed for calcium and chloride ions. Gromacs 4.5.5, T=310K, 300 ns trajectories were calculated with the last 100 ns stored here.

Used in (see therein also a detailed description of ion scaling):

A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers<br>
Scientific Reports 2016, 6, 38035.<br>
DOI: 10.1038/srep38035
description: {"references": ["A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers Scientific Reports 2016, 6, 38035. DOI: 10.1038/srep38035"]}
DOI: 10.5281/zenodo.887633
title: Ensembl R88 Solanum Lycopersicum Linksets

description: Ensembl Solanum Lycopersicum LinkSets

Gene - Transcript - Protein
DOI: 10.5281/zenodo.887634
title: Ensembl R88 Solanum Lycopersicum Linksets

description: Ensembl Solanum Lycopersicum LinkSets

Gene - Transcript - Protein
DOI: 10.5281/zenodo.887399
title: Md Simulation Trajectory Of A Popc/Pops (4:1) Bilayer With 715Mm Cacl2, Berger Force Field For Lipids, Scaled Charges For Ca2+ And Cl-

description: MD simulation trajectory of a POPC/POPS (4:1) bilayer with 715 mM CaCl2 (104 POPC, 24 POPS, 26 POPS, 4306 WAT, 72 Ca2+, 112 Cl-). Additional Ca2+ cations added to neutralize the negative charge of POPS (leading to total Ca2+ concentration of 919 mM). Berger force field for lipids, scaled charges employed for calcium and chloride ions. Gromacs 4.5.5, T=310K, 300 ns trajectories were calculated with the last 100 ns stored here.

Used in (see therein also a detailed description of ion scaling):

A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers<br>
Scientific Reports 2016, 6, 38035.<br>
DOI: 10.1038/srep38035
description: {"references": ["A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers Scientific Reports 2016, 6, 38035. DOI: 10.1038/srep38035"]}
DOI: 10.5281/zenodo.887400
title: Md Simulation Trajectory Of A Popc/Pops (4:1) Bilayer With 715Mm Cacl2, Berger Force Field For Lipids, Scaled Charges For Ca2+ And Cl-

description: MD simulation trajectory of a POPC/POPS (4:1) bilayer with 715 mM CaCl2 (104 POPC, 24 POPS, 26 POPS, 4306 WAT, 72 Ca2+, 112 Cl-). Additional Ca2+ cations added to neutralize the negative charge of POPS (leading to total Ca2+ concentration of 919 mM). Berger force field for lipids, scaled charges employed for calcium and chloride ions. Gromacs 4.5.5, T=310K, 300 ns trajectories were calculated with the last 100 ns stored here.

Used in (see therein also a detailed description of ion scaling):

A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers<br>
Scientific Reports 2016, 6, 38035.<br>
DOI: 10.1038/srep38035
description: {"references": ["A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers Scientific Reports 2016, 6, 38035. DOI: 10.1038/srep38035"]}
DOI: 10.5281/zenodo.884552
title: Benchmarks And Results Of Experiments Evaluating Various Proof Compression Algorithms

description: These experiments were discussed in a paper published at the Tableaux 2013 conference.
DOI: 10.5281/zenodo.887635
title: Ensembl R88 Sus Scrofa Linksets

description: Ensembl Sus Scrofa LinkSets

Gene - Transcript - Protein
DOI: 10.5281/zenodo.887636
title: Ensembl R88 Sus Scrofa Linksets

description: Ensembl Sus Scrofa LinkSets

Gene - Transcript - Protein
DOI: 10.5281/zenodo.884551
title: Benchmarks And Results Of Experiments Evaluating Various Proof Compression Algorithms

description: These experiments were discussed in a paper published at the Tableaux 2013 conference.
DOI: 10.5281/zenodo.887992
title: 2015 Greek Referendum (#Greferendum) Tweets

description: This file provides the tweet identifiers of a dataset created after the July 5, 2015 Greek referendum. On July 5, 2015, Greek people were called to approve or reject the terms attached to the financial assistance provided by the European Commission, the European Central Bank and the International Monetary Foundation during the ongoing debt crisis that hit the country since 2010. The rejection of the terms by a large majority (61,31%) fueled a crisis between European partners as the Greek government sought to obtain debt relief, whereas the only acceptable solutions for the country's creditors were either the continuation of the financial assistance under the same terms without debt relief or a Greek exit from the Eurozone. During the July 12 Eurozone Summit, the Greek government finally consented to a third financial assistance programme in exchange of harsh austerity measures and an extended privatization programme.     

The event was largely present in the social network sites. On Twitter, various hashtags emerged with #greferendum (contraction for "Greek referendum") being the most important. A sample of 204 713 tweets with the hashtag #greferendum were collected with NodeXL software from July 6 to July 16 2015. Thus, the dataset provides tweets produced in the aftermath of the Greek vote during the short period that led to a third financial assistance programme. This file contains the IDs of these tweets that can help recover full data and metadata through use of various applications (see for example the DocNow Hydrator application &lt;https://github.com/DocNow/hydrator&gt;).
DOI: 10.5281/zenodo.887993
title: 2015 Greek Referendum (#Greferendum) Tweets

description: This file provides the tweet identifiers of a dataset created after the July 5, 2015 Greek referendum. On July 5, 2015, Greek people were called to approve or reject the terms attached to the financial assistance provided by the European Commission, the European Central Bank and the International Monetary Foundation during the ongoing debt crisis that hit the country since 2010. The rejection of the terms by a large majority (61,31%) fueled a crisis between European partners as the Greek government sought to obtain debt relief, whereas the only acceptable solutions for the country's creditors were either the continuation of the financial assistance under the same terms without debt relief or a Greek exit from the Eurozone. During the July 12 Eurozone Summit, the Greek government finally consented to a third financial assistance programme in exchange of harsh austerity measures and an extended privatization programme.     

The event was largely present in the social network sites. On Twitter, various hashtags emerged with #greferendum (contraction for "Greek referendum") being the most important. A sample of 204 713 tweets with the hashtag #greferendum were collected with NodeXL software from July 6 to July 16 2015. Thus, the dataset provides tweets produced in the aftermath of the Greek vote during the short period that led to a third financial assistance programme. This file contains the IDs of these tweets that can help recover full data and metadata through use of various applications (see for example the DocNow Hydrator application &lt;https://github.com/DocNow/hydrator&gt;).
DOI: 10.5281/zenodo.888342
title: Landsat 8 And Srtm Data Processed For Soil Classification (Yuri Coelho'S Thesis)

description: This dataset was processed for the Senior Thesis of Yuri Coelho.

The dataset is composed by the processed rasters that are used in the Senior Thesis. The objective of the dataset is to classify satellite data into Soil Classes.
DOI: 10.5281/zenodo.888341
title: Landsat 8 And Srtm Data Processed For Soil Classification (Yuri Coelho'S Thesis)

description: This dataset was processed for the Senior Thesis of Yuri Coelho.

The dataset is composed by the processed rasters that are used in the Senior Thesis. The objective of the dataset is to classify satellite data into Soil Classes.
DOI: 10.5517/ccdc.csd.cc1pt3vg
title: CCDC 1573276: Experimental Crystal Structure Determination

description: Related Article: Okten Ungor, Michael Shatruk|2017|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/n36vem
title: A revision of Grimmia (Grimmiaceae) from South Africa and Lesotho

description: This dataset contains the digitized treatments in Plazi based on the original journal article Eva Maier, Michelle J. Price, Terry A. Hedderson (2017): A revision of Grimmia (Grimmiaceae) from South Africa and Lesotho. Candollea 72: 199-230, DOI: 10.15553/c2017v721a12
DOI: 10.5517/ccdc.csd.ccwqnt1
title: CCDC 826144: Experimental Crystal Structure Determination

description: Related Article: Gabriella Bombieri, Roberto Artali, Sax A. Mason, Garry J. McIntyre, Armando Mortillaro, Silvio Aime|2018|Inorg.Chim.Acta|470|433|doi:10.1016/j.ica.2017.09.021
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.ccwqnv2
title: CCDC 826145: Experimental Crystal Structure Determination

description: Related Article: Gabriella Bombieri, Roberto Artali, Sax A. Mason, Garry J. McIntyre, Armando Mortillaro, Silvio Aime|2018|Inorg.Chim.Acta|470|433|doi:10.1016/j.ica.2017.09.021
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.ccwqvxb
title: CCDC 826333: Experimental Crystal Structure Determination

description: Related Article: Gabriella Bombieri, Roberto Artali, Sax A. Mason, Garry J. McIntyre, Armando Mortillaro, Silvio Aime|2018|Inorg.Chim.Acta|470|433|doi:10.1016/j.ica.2017.09.021
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.ccwqvyc
title: CCDC 826334: Experimental Crystal Structure Determination

description: Related Article: Gabriella Bombieri, Roberto Artali, Sax A. Mason, Garry J. McIntyre, Armando Mortillaro, Silvio Aime|2018|Inorg.Chim.Acta|470|433|doi:10.1016/j.ica.2017.09.021
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.