cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.533gf/3
title: Fish Trajectory Data

description: 3D position data for Danio aequipinnatus. The columns represent the trial number, the index number (to differentiate individual animals within a trial -- note they are not consistent between trials), the frame (used for synchronizing the data), and the XYZ position coordinates with respect to a global reference frame. Information about how the data was collected is in the ReadMe file.
DOI: 10.5061/dryad.538f8/1
title: Data description for Cooke and Leishman

description: Description of the column names in the csv files and the list of references used for the data compilation
DOI: 10.5061/dryad.538f8/3
title: Effect size data

description: Dataset reporting effect sizes from 125 articles exploring the effects of silicon on abiotic stress in plants used in Cooke, J. and M.R. Leishman (2016) Consistent alleviation of abiotic stress with silicon addition: a meta-analysis. Functional Ecology. DOI: 10.1111/1365-2435.12713.  Effect sizes are calculated by comparing responses of stressed plants supplied with silicon to stressed plants not supplied with silicon.  The exception is for 'Silicon concentration' where stressed plants are compared to non-stressed plants.  Details of data compilation and effect size calculations can be found in the main manuscript.
DOI: 10.5061/dryad.58g12/1
title: AIV in Non-Anseriformes and Non-Charadriiformes wild birds

description: This database displays up to the end of 2015 all data on the Non-Anseriformes and Non-Charadriiformes wild birds tested for Avian Influenza A by RT-PCR or Virus Isolation, based on a systematic literature review.
DOI: 10.5061/dryad.5bm68/1
title: Cohort experiment data

description: This file contains data for primary producers, decomposition rates, net primary productivity and respiration rates, community structure, and biomass of functional groups, either as repeated samples or final measurements at the end of the experiment. Details on individual data sheet are given in readme file.
DOI: 10.5061/dryad.5vb8v.1
title: Data from: Seascape genomics provides evidence for thermal adaptation and current-mediated population structure in American lobster (Homarus americanus)
DOI: 10.5061/dryad.5vb8v.2/13.2
title: Environmental

description: The sea surface temperature data.
DOI: 10.5061/dryad.5vb8v.2/14.2
title: script-AEM

description: The file used to visualize AEM vectors.
DOI: 10.5061/dryad.5vb8v.2/15.2
title: freq-allelic-13688snps.txt.frq

description: All the allele frequencies at each SNP used to perform correlation tests.
DOI: 10.5061/dryad.5vb8v.2/16.2
title: 8094loci

description: All the sequence used to perform a BLAST search.
DOI: 10.5061/dryad.6t9r0/1
title: Menzel et al Raw data

description: Cuticular hydrocarbon data of the species investigated. In the first data sheet, each row is one CHC peak. The table contains information about the chain length, substance class, per cent abundance and methyl groups (if applicable). The second sheet contains information about the species collected, their phylogenetic affiliation, the latitude, annual precipitation and annual temperature of the collection site.
DOI: 10.5061/dryad.d27vt/1
title: Wild dog den sites and random sites

description: CSV file containing the ecological attributes associated with each den and random site. Ecological data were derived from airborne LiDAR measurements.Dens are coded as 1 and random sites as 0 under the column "site". Dens are further distinguished as being either first (1) or secondary (2) den sites under the column "YearID".
DOI: 10.5061/dryad.d27vt/2
title: Characteristics of the environment around den and random sites

description: CSV file containing ecological data in a 250 m radius around den and random sites. Data were derived from airborne LiDAR measurements and interpolated over the environment area (250 m radius). The data therefore represent averaged values around each den and random site. Dens are coded as 1 and random sites as 0 under the column "site". Dens are further distinguished as being either first (1) or secondary (2) den sites under the column "YearID".
DOI: 10.5061/dryad.d27vt/3
title: Ecological and social (pack attributes) data associated with each wild dog den site

description: CSV file containing the ecological and social (pack) attributes associated with each wild dog den site. Ecological data were derived from airborne LiDAR measurements.
DOI: 10.5061/dryad.fq18t/1
title: LeCraw_Ecography_LeafMass_BromSize

description: Decomposition rate experiment; Figure 1Raw leaf mass data from leaf packs in all three experimental sites.Table headings:Site – Experimental SiteM0_g – Starting dry leaf massMt_g – Final dry leaf massT_days – length of experiment in daysBrom_capacity_mL – Maximum water holding capacity of bromeliadK – Exponential decay constant calculated as (ln(start)-ln(final))/days
DOI: 10.5061/dryad.g7t04.1
title: Data from: Impact of caesarean section on mode of delivery, pregnancy-induced and pregnancy-associated disorders, and complications in the subsequent pregnancy in Germany
DOI: 10.5061/dryad.g7t04.2
title: Data from: Impact of caesarean section on mode of delivery, pregnancy-induced and pregnancy-associated disorders, and complications in the subsequent pregnancy in Germany
DOI: 10.5061/dryad.g7t04.2/1.2
title: caesarean_section

description: 1,801 women with caesarean section (CS) and 1,801 matched women with vaginal delivery (VD) from gynecological practices in Germany. Data set includes the patient-id, age, obesity, mode of delivery (CS versus VD) in the first pregnancy and in the second pregnancy, the most common pregnancy-induced diseases, pregnancy-associated disorders and complications prior to or during birth in the subsequent pregnancy. The index date (Indexdate) relates to the physician visit.
DOI: 10.5061/dryad.h4tn7/1
title: First-order Dataframe

description: Raw occupancy data (first-order scale of selection) for leopards Panthera pardus.
DOI: 10.5061/dryad.h4tn7/2
title: Second-order Dataframe

description: Raw logistic regression data (second-order scale of selection) for leopards Panthera pardus.
DOI: 10.5061/dryad.h4tn7/3
title: Third-order Dataframe

description: Raw logistic regression data (third-order scale of selection) for leopards Panthera pardus.
DOI: 10.5061/dryad.mg363/13
title: Cell2_Pal16-1-2_Sept19a

description: Serial sections and chromosome counts of the cell nucleus from Symbiodinium glynnii sp. nov.
DOI: 10.5061/dryad.mg363/14
title: Cell3_Chromosome_counts_S.glynnii

description: Serial sections and chromosome counts of the cell nucleus from Symbiodinium glynnii sp. nov.
DOI: 10.5061/dryad.mg363/15
title: Cell4_Pal16-1-2-sept19-cell3

description: Serial sections and chromosome counts of the cell nucleus from Symbiodinium glynnii sp. nov.
DOI: 10.5061/dryad.mg363/16
title: Cell5_Pal16_1_glynnii_ROI_01a

description: Serial sections and chromosome counts of the cell nucleus from Symbiodinium glynnii sp. nov.
DOI: 10.5061/dryad.mg363/17
title: Cell5_Pal16_1_glynnii_ROI_01b

description: Serial sections and chromosome counts of the cell nucleus from Symbiodinium glynnii sp. nov.
DOI: 10.5061/dryad.mg363/18
title: Cell5_Pal16_1_glynnii_ROI_01c

description: Serial sections and chromosome counts of the cell nucleus from Symbiodinium glynnii sp. nov.
DOI: 10.5061/dryad.mg363/19
title: Cell5_Pal16_1_glynnii_ROI_01d

description: Serial sections and chromosome counts of the cell nucleus from Symbiodinium glynnii sp. nov.
DOI: 10.5061/dryad.mg363/20
title: Master microsatellite Dataset

description: Master file of microsatellite data, including host identity and location information, Symbiodinium species, ITS2 genotype
DOI: 10.5061/dryad.p48f7/1
title: Ingested Plastics Data

description: Cleaned plastics ingestion data
DOI: 10.5061/dryad.p937t/1
title: Zip file part 1

description: File 1 of 5 of the multi-part zip file.  All 5 parts need to be downloaded and merged together before unzip.  Readme is included as an Microsoft Excel file.  Each folder inside has .mat files (MATLAB binary data) which contains 10 matrices, one for each data trial.  Each matrix is of 4 muscles x 324000 data samples collected over 5 minutes at 1080 Hz.
DOI: 10.5061/dryad.p937t/2
title: emg-data-part2

description: see above
DOI: 10.5061/dryad.p937t/3
title: emg data part 3

description: see above
DOI: 10.5061/dryad.p937t/4
title: emg-data-part4

description: see above
DOI: 10.5061/dryad.p937t/5
title: emg data part 5 - zip portion

description: part 5 of 5
DOI: 10.5061/dryad.ph416/1
title: data file
DOI: 10.5061/dryad.q9p4j/1
title: MonotomidGen Lucid Key Files

description: This ZIP file includes all the deployed LUCID key files.
DOI: 10.5061/dryad.r2s4n/1
title: Community indices and CWM traits

description: Community indices and CWM traits of all the 48 plots in our experiment.
DOI: 10.5061/dryad.s0t8b/1
title: Ivy et al. 2017 Complete Dataset for Dryad

description: Complete dataset for the following publication: Ivy, C.M., Robertson, C.E. and Bernier N.J. 2017. Acute embryonic anoxia exposure favours the development of a dominant and aggressive phenotype in adult zebrafish. Proc. R. Soc. B 20161868.
DOI: 10.5061/dryad.s8v80/1
title: Structure Input File

description: Data matrix for Structure runs
DOI: 10.5061/dryad.s8v80/2
title: SNAPP Input File

description: Input file for SNAPP species tree runs in BEAST
DOI: 10.5061/dryad.t1204/1
title: FruitSet_InitialCrosses

description: Fruit set data: whether or not a fruit resulted from the pollination treatments. Data are at the flower level.
DOI: 10.5061/dryad.t1204/2
title: SeedSet_InitialCrosses.

description: Seed set data: Mass of fruits is used as surrogate for seeds per fruit. Data are at the flower level.
DOI: 10.5061/dryad.t1204/3
title: Germination
DOI: 10.5061/dryad.t1204/4
title: EarlySurvival
DOI: 10.5061/dryad.t1204/5
title: SizeSurvivalReproduction
DOI: 10.5061/dryad.tj1jk/1
title: dryad_microsatellite_data

description: Microsatellite genotypes of all chub analyzed in the study.
DOI: 10.5061/dryad.tj1jk/2
title: dryad_traditional_morphmetric_data

description: Traditional morphometric data of all chub analyzed in the study.
DOI: 10.5061/dryad.tj1jk/3
title: dryad_geometric_morphometric_data

description: Raw data used for geometric morphometric analyses (landmark coordinates in .tps format for import into geometric morphometrics software packages such as MorphoJ).
DOI: 10.5061/dryad.v4f53/1
title: vanProosdij_etal_2016_PlosOne_SMTable_specieslist

description: This file lists all species for which significant Species Distribution Models were generated that were used for analysis. The SDMs of these species are uploaded here as well.
DOI: 10.5061/dryad.v4f53/2
title: vanProosdij_etal_2016_PlosOne_SpeciesDistributionModels

description: These files are the Species Distribution Models for 2089 Gabonese plant species that were trained on sufficient observation records and perform signifincantly better than random null models. Files were cropped to the country borders of Gabon and are presented in .asc format.
DOI: 10.5061/dryad.04f8c/1
title: Vandvik_germination

description: Data from for lab germination experiments and a field regeneration experiment of 11 alpine grassland forbs in Norway in 1998-2000.
DOI: 10.5061/dryad.10940/1
title: DATASET_CARDOSO&OTTONI

description: Behavioral data for ms published in Biology Letters "The effects of tradition on problem solving by two wild populations of bearded capuchin monkeys in a probing task."This is a xlsx file with the following variables (see ms for details): Individual identity (ID); Population, Sex, Age group, Number of visits to the boxes (NUMVISIT), Time Visit, Mean time spent per visit (MEAN_TIME VISIT), Insertion of fingers (FINGERS), Frequency of Probing Events (PROBE EVENT), Frequency of successful probing (SUCCESSFUL), Number of probe tools.
DOI: 10.5061/dryad.1fn46/1
title: South African grass communities

description: data on grass observations in 10 savannah plots in Hluhluwe iMfolozi Park, South Africa. First column: plot name. Second column: location (grid cell intersection point) within plot. Third column: species name.
DOI: 10.5061/dryad.1fn46/2
title: carabids 2011-2014

description: Data on carabid observations in pitfall traps in Drenthe, Netherlands. Colum names: Blik_nr. = pitfall number; Datum = Date; Jaar = year; serie = location; soort_kever = species name; Totaal = number of individuals; Seriejaar = location-year combination; PosVal = position pitfall (each location contained three pitfalls, only second included in this study, see publication); week = week of the year (ranginging from 1-53).
DOI: 10.5061/dryad.1fn46/3
title: carabid traits final

description: Carabid morphological traits. Column names: name_correct = species name; source_measurement = researcher who performed measurement; body_length = body length in mm; antenna_length = antenna length in mm; metafemur_length = length metafemur in mm; eyewith_corr = eye width in mm; note = note; resid_femur = residual femur length in mm (i.e. residual from linear model in which femur length is explained by body length);  resid_eye = residual eye length in mm (i.e. residual from linear model in which eye length is explained by body length) resid_antenna = residual antenna length in mm (i.e. residual from linear model in which antenna length is explained by body length)
DOI: 10.5061/dryad.1fn46/4
title: undersampling ground beetles

description: file to analyse how accuracy and precision of various FD metrics depends on undersampling. This specific file was used for the analysis of ground beetle data. Files with small modifications were used to analyse South African grass data and breeding bird data of Vermont. In principle, with some modifications, this file can be used to study undersampling in for any kind of community data, if community and corresponding trait data are provided as input.
DOI: 10.5061/dryad.1fn46/5
title: undersampling of artificial communities

description: R file to investigate how the accuracy and precision of FD metrics is affected by undersampling, and how this depends on the species richness, number of individuals and species abundance distribution of the 'region,' 'species pool' or 'landscape'
DOI: 10.5061/dryad.22t16/1
title: Data 1. Effects of the intra-individual variable on the nurse effects of cushions plants

description: Data 1. Relative interaction indices (RII) between the nurse cushions Azorella compacta and Pycnophyllum spp. and the neighbouring plant communities. Each line represents an interaction between one individual cushion and one associated species, either at the centre of at the periphery of cushions (variable intra-individual). Data shown at three elevations.
DOI: 10.5061/dryad.22t16/2
title: Data 2. The effects of inter-specific variations in nurses on the outcome of interactions

description: Data 2. The effects of inter-specific variations in nurses on the outcome of interactions with other plants in the Sajama National Park, Bolivia. Each line represents an interaction between one individual cushion and one associated species, through the Relative interaction index (RII). RII not shown when null values.
DOI: 10.5061/dryad.22t16/3
title: Data 3. The effects of intra-specific variations in the nurse Azorella compacta on the outcome of interactions

description: Data 3. The effects of intra-specific variations in the nurse Azorella compacta on the outcome of interactions with other plants in the Sajama National Park, Bolivia. Intra-specific variable hase two modalities : complex shape and hemispheric shape. Each line represents an interaction between one individual cushion and one associated species, through the Relative Interaction Index (RII). RII not shown when null values.
DOI: 10.5061/dryad.22t16/4
title: Data 4. Effects of intra-individual variations on the relative mortalities of the nurse cushions

description: Data 4. Effects of intra-individual variations (centre vs. periphery) on the relative mortalities of the nurse cushions Azorella compacta and Pycnophyllum spp. Data available only at 4900 m.
DOI: 10.5061/dryad.22t16/5
title: Data 5. Minimum temperature in cushions.

description: Data 5. Daily minimum temperature in the nurse cushions Azorella compacta and Pycnophyllum spp. at different elevations. Data provided (1) at the surface of cushions and (2) 1.5 cm belowground. Additional treatment: location on cushions.
DOI: 10.5061/dryad.22t16/6
title: Data 6. Compaction of cushions (KPa)

description: Data 6. Compaction in nurse cushions at site 4900 m, along with the variables inter-specific, intra-specific and intra-individual.
DOI: 10.5061/dryad.2hf38/1
title: RSOS160494_Python_Code

description: Python scripts for the particle tracking model and data processing.
DOI: 10.5061/dryad.2vn65/14
title: ROB.results

description: The grade for each of the seven risk of bias domain for the 160 included RCTs are listed.
DOI: 10.5061/dryad.2vn65/15
title: Excluded RCTs.315.xlsx

description: Reasons for excluding RCTs from the review.
DOI: 10.5061/dryad.2vn65/16
title: Continents.countries

description: A list of the countries associated with each included RCTs.
DOI: 10.5061/dryad.2vn65/17
title: Anesthesia Techniques.xlsx

description: Different IV techniques were compared to IV techniques and volatile techniques and other techniques. Inadequate anesthesia protocol are summarized from some of the RCTs.
DOI: 10.5061/dryad.2vn65/18
title: MR.use

description: The use of muscle relaxants (MRs) or neuromuscular blockade (NMBs) within each of the 160 included RCTs.
DOI: 10.5061/dryad.2vn65/19
title: ADM all types

description: A description of the types of anesthesia depth monitors (ADM) that were processed EEGs and auditory evoked potential (EVP) used in the included RCTs.
DOI: 10.5061/dryad.2vn65/20
title: Classification.Wang.Messina.Ward.grade

description: The classification system that tracks patients level of consciousness during anesthesia and surgery. Grades 0 to 5 were assigned to each of the 160 included RCTs.
DOI: 10.5061/dryad.2vn65/21
title: patient awareness reports.xlsx

description: Patient awareness reports submitted to the investigators in some of the RCTs studies and organized according to the classification of experts into possible and definite awareness.
DOI: 10.5061/dryad.2vn65/22
title: wakeful v wakeful.aware v wakeful

description: An analysis of the relationship between wakefulness and awareness.
DOI: 10.5061/dryad.3bc3s/1
title: RiversetalVGSWHandicappingRawData

description: This file contains data used to assess variation in pre-treatment measurements of adult females (tab1-tab2); data used to assess treatment effects on adult female baseline corticosterone, body mass, number of offspring fledged (tab3-tab4); data used to assess feeding rates by males, females, and males + females combined (tab5-tab7); data used to assess treatment effects on offspring body mass and baseline corticosterone (tab8); and data used to assess treatment effects on the time for females to enter nest boxes in the presence of a novel object (tab9).
DOI: 10.5061/dryad.3j4df/1
title: Combined_Behav obs_ALLyears_Master

description: Data from behavioral observations of RBFW. Focuses on singing behavior, but also has info on all other relevant reproductive behaviors.
DOI: 10.5061/dryad.3j4df/2
title: PBexp_Analysis_Master_PBonly

description: Data from playback experiment conducted in 2012.
DOI: 10.5061/dryad.3m5v5/2
title: fnames.csv

description: fnames.csv relates unit index with the original data filename, to link back to the raw data. The format of the file is described in readData.m.
DOI: 10.5061/dryad.3m5v5/3
title: stim.csv

description: stim.csv contains the sequence of stimuli. The format of the file is described in readData.m.
DOI: 10.5061/dryad.3m5v5/4
title: resp.csv

description: resp.csv is the main data file. It contains spike times for all trials of all neurons. Each trial is represented by 700 ms, with stimulus onset at 200 ms after trial onset. Tone duration is 230 ms. The format of the file is described in readData.m.
DOI: 10.5061/dryad.3m5v5/5
title: readData.m

description: This file contains a description of the three files comprising this data set, as well as example matlab code for reading and processing them.
DOI: 10.5061/dryad.512p5/1
title: Functional trait data

description: Functional trait data for transplants and individuals of the resident community within blocks. Blocks consisted of a “no competition plot”, a “competition plot”, and a control plot of the resident community and varied in their soil moisture. The traits measured include specific leaf area, leaf dry matter content, height, stem specific density, and plant biomass. All traits were measured at the end of the growing season. See the README file and description of Methods in the paper for metadata.
DOI: 10.5061/dryad.571f8/1
title: CTmax_phenotype_D_melanogaster

description: CTmax of D. melanogaster flies (ramping assay at 0.1C/min from 20C until no further movement registered). Four experimental groups were assayed: development at 15C constant temperature, 15C fluctuating temperature, 25C constant temperature, 25C fluctuating temperature.
DOI: 10.5061/dryad.65q20/1
title: Oyster NanoDrop DNA data

description: NanoDrop A260/280, A260/230, and yield estimates for genomic DNA of 24 adductor muscle samples extracted with 4 different methods.
DOI: 10.5061/dryad.65q20/2
title: Oyster NanoDrop and Qubit data

description: NanoDrop A260/280, A260/230, and yield estimates for genomic DNA of 24 adductor muscle samples extracted with 4 different methods. Qubit-based yield estimates are also included in this file.
DOI: 10.5061/dryad.65q20/3
title: R scripts

description: R scripts for statistical analyses and figure generation.
DOI: 10.5061/dryad.6jq5d/3
title: Additional Supporting Information

description: This file contains four appendices: the character list (Appendix S1), the character scorings modified from the original data matrix of Zanno et al. (2015) for Carnufex carolinensis (Appendix S2), the table of specimens used to build the palaeomap of Triassic crocodylomorphs (Fig. 15) (Appendix S3), and the references of the Additional Supporting Information (Appendix S4).
DOI: 10.5061/dryad.6jq5d/4
title: Data matrix used for the analysis

description: This data matrix is based upon a modified version of the data matrix of Lecuona (2013), which in turn, was modified from the analysis of Nesbitt (2011). The changes proposed by Butler et al. (2014) were also in this data matrix (also Lecuona et al. unpub. data). Finally, we added the early crocodylomorph Carnufex carolinensis (Zanno et al. 2015, Drymala and Zanno 2016), modified scorings for several taxa, and modified the formulation of the characters 219 and 241. Three terminals were included for Trialestes, the holotype (PVL 2561), the referred specimen (PVL 3889), and the combination of both. The final data matrix consists on 87 terminals and 483 characters.
DOI: 10.5061/dryad.6q738/1
title: ColguoGenomePaper2016

description: This file contains 1) files for divergence time estimation, 2) Sequence matrices used for phylogenetic analysis, 3) Files for the BPP analyses, and 4) 21 mammal orthologous alignments
DOI: 10.5061/dryad.72j20/1
title: Murn C, Holloway, G (2016) Data from: Using areas of known occupancy to identify sources of variation in detection probability of raptors: taking time lowers replication effort for surveys. Royal Society Open Science

description: Contains encounter rates and values for covariates used in the modelling programme PRESENCE.
DOI: 10.5061/dryad.8f14k/1
title: Oxygen consumption before hatching of fish embryos as a function of egg size

description: This dataset contains information on the size (radius and volume), experimental temperature, and oxygen consumption rate (micrograms O2/hr) of embryos of 14 species of fish measure before hatching.
DOI: 10.5061/dryad.8ss09/1
title: Microsatellite data

description: Genepop file (3 digit format) containing all microsatellite data. Population names are listed in Table 1 of the paper.
DOI: 10.5061/dryad.bb095/1
title: Soil N2O emissions and other environmental variables for KBS LTER

description: The data files contains basic data used in the publication