cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.kxtsmp
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hoffmannseggia doellii Phil."
 ]
}

 The dataset includes 81 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022245-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ghckq6
title: Occurrence Download

description: A dataset containing 218 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Marrubium globosum Montbret & Aucher ex Benth."
 ]
}

 The dataset includes 218 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079982-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g9tnp5
title: Occurrence Download

description: A dataset containing 491543 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2023-10-12",
 "EventDate is less than or equal to 2023-11-11",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 491543 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022198-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uu0ngo
title: Occurrence Download

description: A dataset containing 521 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ambystoma mexicanum (Shaw & Nodder, 1798)"
 ]
}

 The dataset includes 521 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018565-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.heuksz
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Odontarrhena borzeana (Nyár.) D.A.German"
 ]
}

 The dataset includes 106 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080012-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lw9ika
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Deutsche Schule Budapest"
 ]
}

 The dataset includes 48 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018566-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.shnph3
title: Occurrence Download

description: A dataset containing 5823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((68.81069 -13.60077,165.39923 -13.60077,165.39923 50.2537,68.81069 50.2537,68.81069 -13.60077))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Sabia Colebr."
 ]
}

 The dataset includes 5823 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022242-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dzj2ey
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Henckelia gambleana (C.E.C.Fisch.) A.Weber & B.L.Burtt"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017251-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1wrory
title: Occurrence Download

description: A dataset containing 399 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Avicennia officinalis L."
 ]
}

 The dataset includes 399 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018567-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jyjbqz
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Cnemaspis latha Manamendra-Arachchi, Batuwita & Pethiyagoda, 2007"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079985-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uo23do
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Stausee Weiditz"
 ]
}

 The dataset includes 39 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018567-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v6tsgr
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Minuartia platyphylla (J.Gay ex Christ) Sunding"
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079995-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wybcfm
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cerastium commersonianum Ser.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 33 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018568-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m5h9ck
title: Occurrence Download

description: A dataset containing 285 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nanophyton erinaceum (Pall.) Bunge"
 ]
}

 The dataset includes 285 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080005-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yriq8t
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Aktion des Romain-Rolland-Gymnasiums"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018568-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zstzct
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Minuartia juniperina Hand.-Mazz."
 ]
}

 The dataset includes 60 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079990-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.geisfj
title: Occurrence Download

description: A dataset containing 5050413 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Animalia",
 "DecimalLatitude is greater than 38.6629779387105",
 "DecimalLatitude is less than 39.2125187858524",
 "DecimalLongitude is greater than -77.6181402597698",
 "DecimalLongitude is less than -76.9143137464044"
 ]
}

 The dataset includes 5050413 records from 159 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000831-171020152545675/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.npveyk
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Clusia globosa Maguire"
 ]
}

 The dataset includes 26 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0099964-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vewf8j
title: Occurrence Download

description: A dataset containing 154833 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is The Scottish Squirrel Database",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 154833 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0193779-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wtpfl1
title: Occurrence Download

description: A dataset containing 23883 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Dermochelys coriacea (Vandelli, 1761)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 23883 records from 124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019970-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yrngvq
title: Occurrence Download

description: A dataset containing 9044 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Calypogeia arguta Nees & Mont.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9044 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000831-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ybm7af
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pelexia comosa (Cogn.) Schltr."
 ]
}

 The dataset includes 4 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180202-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dsnt6c
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Erucastrum meruense Jonsell"
 ]
}

 The dataset includes 15 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023479-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.np6xpr
title: Occurrence Download

description: A dataset containing 7794 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhinolophus ferrumequinum (Schreber, 1774)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "EventDate is greater than or equal to 1950-01-01",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 7794 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000832-150211104439307/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ykjvd8
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chelus orinocensis Vargas-Ramírez, Caballero, Morales-Betancourt, Lasso, Amaya, Martînez, Silva-Viana, Vogt, Pires-Farias, Hrbek, Campbell & Fritz, 2020"
 ]
}

 The dataset includes 123 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180201-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f2qeas
title: Occurrence Download

description: A dataset containing 1817130 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Norwegian Biodiversity Information Centre - Other datasets"
 ]
}

 The dataset includes 1817130 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0193764-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qskavc
title: Occurrence Download

description: A dataset containing 477 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Clusia melchiorii Gleason"
 ]
}

 The dataset includes 477 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0099976-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5wf2na
title: Occurrence Download

description: A dataset containing 10398 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corvus macrorhynchos Wagler, 1827"
 ]
}

 The dataset includes 10398 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000832-150306150734599/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3vkmvb
title: Occurrence Download

description: A dataset containing 162657 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Cirsium undulatum (Nutt.) Spreng., Cirsium vulgare (Savi) Ten., Cirsium wheeleri (A.Gray) Petr., Cirsium wrightii A.Gray, Cissus trifoliata (L.) L., Cistanthe grandiflora (Lindl.) Schltdl., Cistanthe umbellata (Torr.) Hershk., Cistus salviifolius L., Citrullus lanatus (Thunb.) Matsum. & Nakai, Clarkia amoena (Lehm.) A.Nelson & J.F.Macbr., Clarkia amoena subsp. amoena, Clarkia biloba (Durand) A.Nelson & J.F.Macbr., Clarkia bottae (Spach) F.H.Lewis & M.E.Lewis, Clarkia pulchella Pursh, Clarkia purpurea (Curtis) A.Nelson & J.F.Macbr., Clarkia rubicunda (Lindl.) F.H.Lewis & M.E.Lewis, Clarkia speciosa F.H. & M.E.Lewis, Clarkia unguiculata Lindl., Clarkia williamsonii (Durand & Hilg.) F.H.Lewis & M.E.Lewis, Clarkia xantiana A.Gray, Claytonia caroliniana Michx., Claytonia perfoliata Donn., Claytonia rosea Rydb., Claytonia virginica L., Clematis columbiana (Nutt.) Torr. & A.Gray, Clematis hirsutissima Pursh, Clematis integrifolia L., Clematis ligusticifolia Nutt. ex Torr. & A.Gray, Clematis macropetala Ledeb., Clematis occidentalis (Hornem.) DC., Clematis orientalis L., Clematis pitcheri Torr. & A.Gray, Clematis tangutica (Maxim.) Korsh., Clematis terniflora DC., Clematis virginiana L., Cleomella lutea (Hook.) Roalson & J.C.Hall, Cleomella obtusifolia Torr. & Frém., Cleomella plocasperma S.Watson, Cleomella serrulata (Pursh) Roalson & J.C.Hall)",
 "Country is one of (Canada, Mexico, United States of America)"
 ]
}

 The dataset includes 162657 records from 318 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005383-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nup7rx
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Greece",
 "TaxonKey is Monachus monachus (Hermann, 1779)"
 ]
}

 The dataset includes 29 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0099976-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y4ybih
title: Occurrence Download

description: A dataset containing 294 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Macrobrachium acanthurus (Wiegmann, 1836)",
 "Country is Mexico"
 ]
}

 The dataset includes 294 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000832-150311145101897/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mfcfzb
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Clusia neurophylla Cuatrec."
 ]
}

 The dataset includes 4 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0099982-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ge4rep
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epidendrum cornutum Lindl."
 ]
}

 The dataset includes 71 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0193805-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fxyj33
title: Occurrence Download

description: A dataset containing 8693 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Reptilia)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-97.5095851172778 15.8515676853377,-95.1724546053452 15.8515676853377,-95.1724546053452 17.0001413234686,-97.5095851172778 17.0001413234686,-97.5095851172778 15.8515676853377))"
 ]
}

 The dataset includes 8693 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039877-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vdvedg
title: Occurrence Download

description: A dataset containing 164 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Proechimys mincae (J.A.Allen, 1899)",
 "Country is Colombia"
 ]
}

 The dataset includes 164 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000832-150422101436696/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8ztt7n
title: Occurrence Download

description: A dataset containing 24491 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "TaxonKey is Colutea arborescens L."
 ]
}

 The dataset includes 24491 records from 522 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001388-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25483687
title: Probe-level copy ratio (.cnr) and segmentation (.seg) files for 137 keratinocyte samples

description: Copy number was inferred from individual keratinocytes using CNVkit, a Python library and command-line software toolkit to infer and visualize copy number from either DNA-sequencing or RNA-sequencing data. CNVkit produces .<i>cnr</i> files (probe-level copy ratio files) which feature bin-level log2 ratios. These files contain columns for chromosome or reference sequence name, start and end positions, gene name, log2 mean coverage depth, and each bin’s proportional weight or reliability. CNVkit also generates <i>.cns</i> files (segmentation files) which feature segmented log2 ratios. These files share similar columns to <i>.cnr</i> files but with rows corresponding to segments rather than individual probes. It also includes an additional "probe" column, indicating the number of bins covered by the segment. Exporting the segmentation files of multiple samples result in a <i>.seg</i><i> </i>file, which can be loaded in the Integrative Genomic Viewer (IGV).The documentation for CNVKit can be found in Talevich, E., Shain, A. H., <i>et al.,</i> "CNVkit: Genome-Wide Copy Number Detection and Visualization from Targeted DNA Sequencing" and Talevich, E., Shain, A. H., "CNVkit-RNA: Copy number inference from RNA-Sequencing data." It can also be accessed here https://github.com/etal/cnvkit.In this extended dataset, we have provided a zipped folder containing 137 <i>.cnr</i> files and a <i>.seg</i> file for all keratinocyte samples genotyped in this study.
DOI: 10.6084/m9.figshare.25483687.v2
title: Probe-level copy ratio (.cnr) and segmentation (.seg) files for 137 keratinocyte samples

description: Copy number was inferred from individual keratinocytes using CNVkit, a Python library and command-line software toolkit to infer and visualize copy number from either DNA-sequencing or RNA-sequencing data. CNVkit produces .<i>cnr</i> files (probe-level copy ratio files) which feature bin-level log2 ratios. These files contain columns for chromosome or reference sequence name, start and end positions, gene name, log2 mean coverage depth, and each bin’s proportional weight or reliability. CNVkit also generates <i>.cns</i> files (segmentation files) which feature segmented log2 ratios. These files share similar columns to <i>.cnr</i> files but with rows corresponding to segments rather than individual probes. It also includes an additional "probe" column, indicating the number of bins covered by the segment. Exporting the segmentation files of multiple samples result in a <i>.seg</i><i> </i>file, which can be loaded in the Integrative Genomic Viewer (IGV).The documentation for CNVKit can be found in Talevich, E., Shain, A. H., <i>et al.,</i> "CNVkit: Genome-Wide Copy Number Detection and Visualization from Targeted DNA Sequencing" and Talevich, E., Shain, A. H., "CNVkit-RNA: Copy number inference from RNA-Sequencing data." It can also be accessed here https://github.com/etal/cnvkit.In this extended dataset, we have provided a zipped folder containing 137 <i>.cnr</i> files and a <i>.seg</i> file for all keratinocyte samples genotyped in this study.