cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19623825.v1
title: Larval Body Size and Swimming Speed Data

description: <strong>Metadata.csv</strong> contains one row for each clutch used in the experiment. A clutch of larvae share a mother, father, hatch date, and early rearing environment. <strong>Lengths.csv</strong> contains one row for each larva. Lengths were measured from photographs using ImageJ; three measurements of Standard Length (i.e., Notochord Length) were taken for each individual, and the average of those measurements was used. <strong>Speeds.csv</strong> contains one row for each larva. The final speed (in cm/s) and total swimming time (in minutes and seconds) are used to calculate critical swimming speed according to Brett 1964 (doi/10.1139/f64-103).
DOI: 10.6084/m9.figshare.25119566.v3
title: Tornadoes and Waterspouts in Chile / Tornados y Trombas en Chile

description: We provide a dataset of tornadoes and waterspouts in Chile from 1554 to present based in chronicles, newspaper articles, social media, scientific literature and books. The database includes only those events that have been qualified as more than likely a tornado or waterspout based on a subjective qualification by the researchers. For each tornado we provide at least one geographical location point, the local and UTC hour (if known) and for most cases an estimation of the intensity based on the Enhanced Fujita damage scale.The following are the parameters contained in the database:<br><b>N°:</b> This is the entry number or identifier for each record in the file.<b>Location:</b> The name of the place where the weather event occurred.<b>Latitude:</b> The geographical latitude coordinate of the event's location.<b>Longitude:</b> The geographical longitude coordinate of the event's location.<b>Date (Gregorian Calendar):</b> The date when the event occurred, according to the Gregorian calendar.<b>Hour (local):</b> The local time when the event occurred.<b>Hour (UTC):</b> The time of the event in Coordinated Universal Time (UTC).<b>Sound:</b> A binary indicator (usually 1 for 'Yes' and 0 for 'No') showing whether there was a notable sound associated with the event.<b>Hail:</b> A binary indicator showing whether hail was a feature of the weather event.<b>Electric Storm:</b> A binary indicator showing whether the event involved an electric storm.<b>Damage:</b> A binary indicator showing whether there was any damage resulting from the event.<b>Tornado:</b> A binary indicator showing whether a tornado was a part of the event.<b>Waterspout:</b> A binary indicator showing whether a waterspout was observed during the event.<b>Register:</b> This column refers to the existence of some witness account or visual material of a rotating column.<b>Max. EF Rating:</b> The maximum Enhanced Fujita Scale rating assigned to the tornado, indicating its intensity.<b>Analyst:</b> The name or initials of the person who analyzed or reported the event.<b>Fatalities:</b> The number of fatalities (deaths) caused by the event.<b>Injured:</b> The number of injuries reported due to the event.<b>Link to Documents:</b> References or links to documents where the event is described or recorded.<b>Sources:</b> The sources or references from where the information about the event is derived.<b>Comments:</b> Additional remarks or notes about the event, providing context or extra details.<br>
DOI: 10.6084/m9.figshare.21902160.v3
title: Supporting Data for "Organized crime behavior of shell-company networks in procurement: prevention insights for policy and reform", Trends in Organized Crime (2023)

description: Supporting Data for "Organized crime behavior of shell-company networks in procurement: prevention insights for policy and reform", Trends in Organized Crime (2023).
DOI: 10.6084/m9.figshare.27980390.v1
title: MNIST dataset

description: MNIST is a classic dataset consisting of 0~9 handwritten digit images and labels, which provides 60,000 pieces of training data and 10,000 pieces of testing data
DOI: 10.17632/h8szt4hdyw
title: Visual reaction time scores (on the Batak Pro)

description: Hypothesis: In the world of sport reaction times are an important contributor to the success of an athlete. Some sports are more reactive than others and athletes may be required to react to multiple stimuli (team sports) or an opponent (tennis, combat sports, etc). These sports are classified as "open skill" sports. Other sports like swimming, rowing or athletic requires the athlete to only react to the start gun and they perform a very repetitive, cyclic motion. These sports are defined as "closed skill". Due to what seems like clear reactivity demands differing between sports we hypothesised that open skill athletes would perform better than the closed skill athletes on the Batak Pro (a LED light frame used for testing visual motor reaction times). We were also interested in the impact of height, wingspan and ape index (ratio or height and wingspan) on one's ability to score highly on the Batak Pro. The Batak Pro frame is large (height of 2m) so we hypothesised that taller athletes who posses a larger wingspan will perform better than their shorter counterparts on the Batak Pro protocols.
Methods: Each participant had one trial run and three testing trials. The averages and their top score scores are tracked in the data set attached. 
Results:  Our data on trained athletes (competing for more than 5 years) showed no significant difference in reaction times on 4 protocols on the Batak Pro. This data also shows no significant correlations between physical characteristics and performance on any of the Batak protocols.
Interpretations of this dataset: Accounting for the level of athletes being tested (not elite, national or international calibre) it suggests that no difference exists between open and closed skill athletes in reference to visual reaction times. This may be explained as either reactive ability is a trait that is developed and transferable through participation in sport and/or these athletes have yet not experienced reactive sport specific training in which elite calibre athletes may experience. It would be interesting to replicate this study on national/international level athletes.
Data Set Legend:
Classification: 1 = Closed Skill, 2 = Open Skill
Sport: 1 = Rowing, 2 = Swimming, 3 = Field Sports, 4 = Combat Sports
Batak Protocols: Accumulator, Evasion, 4 Corner Stretch-25 target, Mirror Race. See the Batak Pro manual for full descriptions of these protocols.
DOI: 10.6084/m9.figshare.28070297.v1
title: Morphology and morphometry of peripheral nerves after spinal cord injury

description:  
The morphology of peripheral nerves sampled at the time of nerve transfer surgery was directly assessed in 13 participants (mean age at injury 27±8 years and motor level of C4 or below) within 15 months of their spinal cord injury (SCI). Donor nerves included teres minor (TM), posterior axillary (PAX), brachialis (BRAC), extensor carpi radialis brevis (ECRB) and supinator (SUP) nerves. Recipient nerves included those to triceps (TRI), posterior interosseus (PIN) and anterior interosseus (AIN). Fresh nerve samples were fixed in glutaraldehyde, processed and embedded in Araldite Epon. Multiple semi-thin sections from each nerve sample were cut, mounted onto slides, stained with methylene blue or toluidine blue, and imaged by light microscopy using an Olympus BX60 microscope. Glutaraldehyde-fixed nerve specimens were post-fixed with osmium tetroxide, stained with uranyl acetate and alkaline lead citrate and embedded in Epon/araldite. Ultrathin sections were cut and examined using a JEOL 1400 Series transmission electron microscope. Qualitative data were recorded from the nerve specimens according to various morphologic criteria. A comprehensive quantitative morphometric analysis of axon, fibre and myelin areas and diameters and g-ratios was also undertaken.
Over two-thirds of both donor and recipient nerves showed abnormalities that differed in appearance and aetiology. These included myelin thickening and folding (tomacula), demyelination, reduced density of large, myelinated axons, oedematous endoneurium, evidence of compression, and thickened epineurium and perineurium. Morphometric analysis showed differences in axon density and myelination in the sampled nerves, with significant nerve fibre loss in teres minor and posterior axillary nerves, and increased myelin area in the other nerves. The g-ratio was significantly reduced by the degree of myelin thickening. The morphological findings show evidence of widespread peripheral nerve pathology after spinal cord injury.
DOI: 10.17632/fxp44ns7cs
title: Pelatihan Dasar-Dasar Analisis Mnegenai Dampak Lingkungan (Dasar-Dasar AMDAL) Angkatan ke-103

description: Mata pelajaran: (1) Pengarahan program diklat; (2) pengertian, manfaat, proses Amdal dan ukl-upl; (3) dasar-dasar ekologi; (4) ekosistem alami dan buatan; (5) dan sebagainya.
DOI: 10.6084/m9.figshare.12987410.v3
title: Decomposition rates of woody plants leaf- and herb-litter.

description: This dataset covers data related to our article published in Annals of Forest Science : Rawlik K., Nowiński M., Jagodziński A.M., 2020. Short life - fast death. Decomposition rates of woody plants leaf- and herb-litter. The dataset contains: legends - description of all columns in sheets, abbreviations - list of abbreviations used, decomposition - data about decomposition of all samples used in the experiment, meteorological data - data about weather conditions during the experiment, microclimatic conditions - data about splot specific weather conditions.<br>
DOI: 10.6084/m9.figshare.19306892.v1
title: Experimental evolution of high aerobic metabolism results in improved male reproductive success in field conditions.

description: This file includes the data reported in the paper: <br> "Experimental evolution of high aerobic metabolism results in improved male reproductive success in field conditions."<br> Anni M. Hämäläinen 1,2,*,†, Tanja Hirvonen 2,†, Phillip C. Watts 2 , Tapio Mappes 2, Pawel Koteja 1, Esa Koskela 2 Affiliations: 1. Institute of Environmental Sciences, Jagiellonian University, Cracow, Poland 2. Department of Biological and Environmental Science, University of Jyväskylä, Finland * Corresponding author: ORCID: 0000-0001-9260-8299, anni.m.hamalainen@gmail.com † Shared first author
DOI: 10.6084/m9.figshare.23667387.v1
title: Ichioka & Kajimura_foam nest.xlsx

description: This file contains thermal and egg survival data of foam nests those of <em>Zhangixalus arboreus</em> we studied. Additionally, we also publish whole data constitutes all of our figure and table.
DOI: 10.6084/m9.figshare.24135018.v1
title: Data associated with Backward masking in mice requires visual cortex (2023) Samuel D Gale, Chelsea Strawder, Corbett Bennett, Stefan Mihalas, Christof Koch, Shawn R Olsen

description: Behavior data for each session is saved as an hdf5 file. For electrophysiology recordings, spikes times for each unit are also included in the file. Analysis code can be found at https://github.com/samgale/Masking. See also the preprint on bioRxiv, https://doi.org/10.1101/2021.09.26.461573, and the final publication.
DOI: 10.17632/7vdnrdbdj9
title: Replication data for Imports and the CO2 Emissions of Firms

description: This repository contains replication material for the paper Imports and the CO2 Emissions of Firms in Journal of International Economics.

Upon opening the zip file Replication.zip, please follow the instructions in Readme.rdf.
DOI: 10.17632/j9hcschcsp
title: AI_SWEDEHEART

description: AI_SWEDEHEART .brn files
DOI: 10.17632/k33vwbdfsn
title: Broad Auto-Reactive IgM Responses are Common in Critically Ill Patients Including Those with COVID-19, Wong et al.,

description: These are raw output data from human proteome microarrays designed to screen for Ig targets. Data were generated by CDI Laboratories Incorporated (https://cdi.bio), using the HuProt™ service. Data are de-identified from human samples and other personal descriptors. Samples were obtained from patients who were patrons of Emory Healthcare facilities. These data describe five patients who developed severe COVID19 disease and were admitted to ICU (COVID ICU Patients), four healthy control subjects (Healthy Controls) and three patients who were admitted into the ICU for non-COVID related respiratory distress.
DOI: 10.6084/m9.figshare.27281139.v1
title: <b>Text Data for Fire Door Defect Detection</b>

description: The data used to investigate fire door defects in this study were sourced from three apartment complexes, each built by different construction companies in South Korea. Each apartment complex employed standard fire-rated steel doors.
DOI: 10.17632/2t2rz4khs4
title: Upper Cretaceous cleavage and stretching lineation (Eaux-Chaudes massif)

description: Cleavage and stretching lineation data from the upper Cretaceous carbonates of the Eaux-Chaudes massif
DOI: 10.17632/xrssknkh8b
title: Dataset for: The Multidimensional Indicator of Extractives-based Development (MINDEX)

description: Dataset providing data on extractive exports, revenues, reserves and rents.
DOI: 10.6084/m9.figshare.14237222.v1
title: Supplementary Material for: Evolution of Sex Chromosome Heteromorphy in Geographic Populations of the Japanese Tago’s Brown Frog Complex

description: The sex chromosomes of most anuran amphibians are characterized by homomorphy in both sexes, and evolution to heteromorphy rarely occurs at the species or geographic population level. Here, we report sex chromosome heteromorphy in geographic populations of the Japanese Tago’s brown frog complex (2<i>n</i> = 26), comprising <i>Rana sakuraii</i> and <i>R. tagoi</i>. The sex chromosomes of <i>R. sakuraii</i> from the populations in western Japan were homomorphic in both sexes, whereas chromosome 7 from the populations in eastern Japan were heteromorphic in males. Chromosome 7 of <i>R. tagoi</i>, which is distributed close to <i>R. sakuraii</i> in eastern Japan, was highly similar in morphology to the Y chromosome of <i>R. sakuraii</i>. Based on this and on mitochondrial gene sequence analysis, we hypothesize that in the <i>R. sakuraii</i> populations from eastern Japan the XY heteromorphic sex chromosome system was established by the introduction of chromosome 7 from <i>R. tagoi</i> via interspecies hybridization. In contrast, chromosome 13 of <i>R. tagoi</i> from the 2 large islands in western Japan, Shikoku and Kyushu, showed a heteromorphic pattern of constitutive heterochromatin distribution in males, while this pattern was homomorphic in females. Our study reveals that sex chromosome heteromorphy evolved independently at the geographic lineage level in this species complex.
DOI: 10.6084/m9.figshare.21913596.v6
title: Database for existing improved forest management projects in CAR and ACR registries (Dec 2020)

description: This is a database of all existing improved forest management (forest carbon) offset projects as of December 2020. The data was collected from publicly available registries from Climate Action Reserve and American Carbon Registry.
DOI: 10.6084/m9.figshare.22344214.v1
title: perturbseq_adamson

description: Perturb-seq dataset by Adamson et al. 2016 processed for analysis using biolord.
DOI: 10.6084/m9.figshare.26975500.v1
title: PSMCFA_files_and_code.zip

description: Data and code for: Avoidable false PSMC population size peaks occur across numerous studiesThis Item contains all necessary data to recreate the analyses presented in Hilgers et al. "Avoidable false PSMC population size peaks occur across numerous studies". Specifically, we present i) all PSMCFA files from turtles, humans, non-human primates and simulated genomes necessary to rerun analyses and/or test additional parameter settings ii) the code used for simulating genomes with a specified population history as carried out in this study.
DOI: 10.6084/m9.figshare.644497.v2
title: Animated GIFs

description: A group of animated GIFs developed to hopefully explain natural phenomena
DOI: 10.6084/m9.figshare.13516457.v2
title: Osteogenic mechanisms of basal ganglia calcification and its ex-vivo model in hypoparathyroid milieu

description: <br><b>Supplementary dataset for </b><b>Osteogenic mechanisms of basal ganglia calcification and its ex-vivo model in hypoparathyroid milieu</b><b><br></b><b>Supplementary Table 1: </b>Annealing temperature, primers and product size of osteogenic molecules for RT-PCR in autopsy tissues <b>Supplementary Table 2: </b>Annealing temperature, primers and product size of osteogenic molecules in the RT-PCR in SD-rats <b>Supplementary Figure 1: </b>2% agarose gel electrophoresis of amplified products of various molecules following RT-PCR in rat tissues <b>Supplementary Figure 2:</b> Co-localization of osteogenic molecules in autopsy brain tissues with oligodendrocyte marker (CNPase) <br>
DOI: 10.6084/m9.figshare.1354054.v1
title: Computational CellScope LED Dome Design Files

description: NOTE - Up-to-date versions of this work may be found at: https://github.com/Waller-Lab/CompCellScopeHardware and https://github.com/Waller-Lab/CompCellScopeAndroid ----- This file contains all design files necessary to create a domed, programmable, 508 LED Illuminator add-on for the CellScope Device. Included are the CAD design files, PCB design files, Arduino sketches, and Android application for controlling the LED array using a smartphone. The design should also be useful for a variety of other applications invloving a domed LED array.
DOI: 10.6084/m9.figshare.28382480.v1
title: Base metals price index forecasts

description: Monthly World Bank base metals price index (2010 = 100, USD), including aluminium, copper, lead, nickel, tin and zinc, forecasts for the period from 03/2011 to 11/2024, obtained during the realization of the National Science Centre, Poland, grant number 2022/45/B/HS4/00510, Bayesian dynamic mixture models: An application to the study of time-varying determinants of commodity prices.
DOI: 10.6084/m9.figshare.5414152.v1
title: Dataset Plos One 2017

description: Clinical, biological characteristics and computerized cardiotocography parameters
DOI: 10.24376/rd.sgul.20067605.v1
title: COPD_&_CAD_data

description: The dataset comprises demographics and a range of biomedical variables from a cohort of 100 patients (53 patients with a primary diagnosis of Chronic Obstructive Pulmonary Disease (COPD), 24 with a primary diagnosis of coronary artery disease (CAD) and 23 with both COPD and CAD. Patients were recruited from respiratory and cardiology departments at St George's Hospital NHS Foundation Trust between December 2015 and October 2017. Variables include a range of markers of respiratory function, systemic inflammation, cognitive function and structural white matter damage (from brain magnetic resonance imaging). Ethical approval was granted by the national research ethics committee London - Dulwich (16/LO/0547) and East Midlands - Leicester South Research Ethics Committee (15/EM/0425). All patients provided informed written consent.<br> Raw data is provided on Sheet 1 of the Excel file. A number of variables had a non-Guassian distribution. These variables were transformed using log10 or square root transformations.
DOI: 10.6084/m9.figshare.22880288.v1
title: BEAST logs and xml files for OHFV analysis.

description: BEAST logs and xml files for four OHFV data sets (complete genomes and E gene sequences).
DOI: 10.17632/zr5dwm5y3p
title: BCSD-2024V2

description: Among women, breast cancer is a prominent cancer type. Like any other type of cancer, the most crucial aspects influencing the prognosis of breast cancer are early identification and detection. With the use of computers, screening based on mammography provides help in the detection process of breast cancer at an initial stage. Many researchers have examined and put forth techniques for computer-aided diagnosis (CADx) of anomalies associated with breast cancer in mammography throughout the previous fifteen years. CADx frameworks are designed to assist radiologists in providing second opinions regarding breast lesion detection. Big and varied datasets are necessary for training the model of machine learning. They increase the accuracy and resilience of the CADx system by teaching it to recognize patterns linked to breast cancer. Researchers may create and test new image processing and machine learning approaches using comprehensive and well-annotated mammography datasets.
DOI: 10.25411/aru.25109270.v1
title: What choices of visual correction do people make for recreational running? Raw data file

description: Data file supporting the manuscript '<b>What choices of visual correction do people make for recreational running?</b>'
DOI: 10.6084/m9.figshare.19733290.v3
title: GSE130025

description: 3 Ewing sarcoma patient-derived xenografts (PDXs) samples.
DOI: 10.6084/m9.figshare.24564373.v6
title: Data from: Responses in the breeding parameters of the collared flycatcher to the changing climate

description: Global climate change involves various aspects of climate, including precipitation changes and declining surface wind speeds, but studies investigating biological responses have often focused on the impacts of rising temperatures. Additionally, related long-term studies on bird reproduction tend to concentrate on breeding onset, even though other aspects of breeding could also be sensitive to the diverse weather aspects. This study aimed to explore how multiple aspects of breeding (breeding onset, hatching delay, breeding season length, clutch size, fledgling number) were associated with different weather components. We used an almost four-decade-long dataset to investigate the various aspects of breeding parameters of a collared flycatcher (<i>Ficedula albicollis</i>) population in the Carpathian Basin. Analyses revealed some considerable associations, for example, breeding seasons lengthened with the amount of daily precipitation, and clutch size increased with the number of cool days. Parallel and opposing changes in the correlated pairs of breeding and weather parameters were also observed. The phenological mismatch between prey availability and breeding time slightly increased, and fledgling number strongly decreased with increasing mistiming. Our results highlighted the intricate interplay between climate change and the reproductive patterns of migratory birds, emphasizing the need for a holistic approach. The results also underscored the potential threats posed by climate change to bird populations and the importance of adaptive responses to changing environmental conditions.
DOI: 10.6084/m9.figshare.26799025.v1
title: <b>Chromosome-scale genome assembly of </b><b><i>Codonopsis pilosula</i></b><b> and comparative genomic analyses shed light on its genome evolution</b>

description: <i>Codonopsis pilosula</i>, renowned for its edibility and medicinal properties, is a significant plant in traditional Chinese medicine. However, the lack of available genomic resources has hindered further research. This study presents the first chromosome-scale genome assembly of <i>C. pilosula</i> using PacBio CLR reads and Hi-C scaffolding technology. The assembly resulted in a high-quality genome of 679.20 Mb. The genome was anchored to 8 pseudo-chromosomes, with an anchoring rate of 96.5% and a scaffold N50 of 80.50 Mb. The completeness of assembly was determined to be 97.6% by using Benchmarking with Universal Single-Copy Orthologs (BUSCO). Notably, repetitive elements constituted ~76.8% of the genome, with long terminal repeat retrotransposons (LTR-RTs) dominating this group of elements (~29.85% of the genome).
DOI: 10.6084/m9.figshare.28170530.v3
title: <b>Dataset for </b><b>the </b><b>vulnerability assessment of Beijing Ecological Conservation Areas</b>

description: This dataset provides data on the main indicators for vulnerability assessment in Beijing's ecological conservation areas and the results of vulnerability assessment in each area. The dataset consists of two data tables.The sheet indicator data provides data on 22 indicators used to conduct the vulnerability assessment for the seven ecological sheltered areas and counties in Beijing.The sheet VSD data provides the exposure, sensitivity, adaptive capacity and vulnerability scores for the ecological zones and counties.