cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7916390.v1
title: Database of primers of genes in Escherichia coli K-12 without recognition sequence of NdeI and BamHI

description: Polymerase chain reaction (PCR) remains a critical tool for molecular biologists whether in amplifying small quantities of DNA from the environment or single cell, or in cloning of genes from one species into another. The process requires short stretches of nucleotides known as primers to help identify the region of the template DNA for polymerase amplification. Primers designed for amplification of target genes from environmental DNA differs from those designed for molecular cloning. In the case of molecular cloning, key characteristics of the primer include (i) the need for both forward and reverse primers for targeting a specific stretch of template DNA for amplification, (ii) the primers must also be able to form complementary base pairing with a short stretch of template DNA (18 to 25 nucleotide) with melting temperature of about 55 <sup>o</sup>C, (iii) recognition sequence for specific restriction enzymes selected for molecular cloning should also be appended to the start of the primer sequence, and (iv) a flanking sequence is also needed to be appended upstream of the restriction enzyme recognition sequence to help hinge the polymerase to the DNA-primer construct. Using an in-house MATLAB software, a primer database was created for all genes in <i>Escherichia coli</i> K-12 strain MG1655 (Genbank accession number, NC_000913.3) not having recognition sequence of restriction enzymes, NdeI and BamHI, which otherwise would result in the digestion of the gene by the restriction enzyme used and the failure of the cloning effort. Primers designed by the MATLAB algorithm fulfilled the requirements described above for primers to be used in molecular cloning. For each gene in the genome of <i>E. coli</i> K-12 MG1655 without recognition sequence of NdeI and BamHI, one forward and reverse primer was designed for cloning the gene using the restriction enzyme set, NdeI and BamHI. Collectively, a primer database was created for all genes in <i>E. coli</i> K-12 strain MG1655 not having recognition sequence of NdeI and BamHI. Primers designed could be used for cloning the respective genes using NdeI and BamHI as recognition sequences for the two restriction enzymes have been appended to the primer sequence. Overall, the primer database should find use as a reference for researchers in molecular cloning and plasmid construction applications involving <i>E. coli </i>K-12 MG1655.<br>
DOI: 10.17632/5mxd93pjt5
title: The countervailing power Of AI DAOs influences value transformation; Bitcoin (POW) vs.Ethereum (POS)

description: In this paper, we investigate the process of value transformation influenced by the countervailing power of decentralised autonomous organisations (DAO) controlled by artificial intelligence (AI). There are various values in society. The Internet was believed to lead humanity better by further decentralizing various values. However, the uneven distribution of information causes many problems, such as "cyber cascades", "filter bubbles", and "echo chambers" etc. To solve these problems, DAO using blockchain is expected to become a method of solving those problems in the Internet space. 
This paper intends to capture the value change in three steps. In the first step, we take two philosophical approaches. First, using Hegel's dialectic, we attempt to compare A. current social values (thesis), B. the value of, for example, AI DAOs (antithesis), and C. new values (synthesis) in an Internet world where these contradictions exist (A + B = C). The second philosophical approach is to consider the mutuality of Bitcoin (POW) and Ethereum (POS) by adapting Popper's World 1, 2, and 3 models.　
In the second step, we examine the three core capabilities that amplify "credit" in decentralised finance (DeFi): exchange swap rates, staking, and indices (portfolio). Finally, we consider the value dispersion within the Bitcoin and Ethereum networks as the main two poles. The countervailing power between these two poles and the upcoming expanding AI DAOs, especially Bitcoin-halving, coordinate the interests of stakeholders due to the uneven distribution of values and encourage the interaction between diverse values in cyberspace.
DOI: 10.17632/8z4p3mw6dw
title: Data for: The Ca and Mg isotope record of the Cryogenian Trezona carbon isotope excursion

description: Geochemical data (Ca isotopes, Mg isotopes, C isotopes, O isotopes, Sr/Ca ratios, Mg/Ca ratios, and Mn/Ca ratios) from Cryogenian carbonate successions.
DOI: 10.17632/d2j939k88t
title: Kurdish Standard Characters EMNIST-like Dataset

description: The Kurdish Character dataset is a comprehensive collection of the Kurdish alphabet, providing detailed information about each letter used in the Kurdish writing system. This dataset serves as a valuable resource for learning and studying the Kurdish language, as well as for developing language processing applications and educational tools.
The dataset includes all letters of the Kurdish alphabet, encompassing both the Arabic-based Sorani script and the Latin-based Kurmanji script. The collection mostly consists of (58) characters and was created with the assistance of about (3500) native people. This work is an enormous collection of individual handwritten Central Kurdish character representations. totally with 7000 photos for each character, it has (406000) total images. Preprocessing and subsequent preparation of the dataset used in this work were done in accordance with EMINST standards.
the dataset aims to capture the natural handwriting styles and variations that exist in the Kurdish language. This allows for a more authentic representation of the Kurdish alphabet, considering the different ways individuals may write each letter. The collected dataset can be used for various purposes such as developing handwriting recognition systems, analyzing handwriting patterns, improving the accuracy of optical character recognition (OCR) algorithms, and enhancing the overall understanding and study of the Kurdish script.
DOI: 10.6084/m9.figshare.759605.v1
title: Religion, Faith and Spirituality at the Edinburgh Summer Festivals 2013: A Compilation of Islamicate and Other Events

description: A chronological list of Edinburgh's Summer Festivals in 2013 outlining a broad selection of events having to do with faith, religion and spirituality, with a particular focus on Islam and Muslims.
DOI: 10.6084/m9.figshare.20449356.v2
title: From predictive models to cognitive models: Separable behavioral processes underlying reward learning in the rat

description: From predictive models to cognitive models: Separable behavioral processes underlying reward learning in the rat <br> Kevin J Miller, Matthew M Botvinick, and Carlos D Brody <br> Behavioral dataset of rats performing a two-armed bandit task <br> Manuscript available at: https://www.biorxiv.org/content/10.1101/461129v3
DOI: 10.6084/m9.figshare.4814695.v3
title: 3 objective problem test cases

description: A set of randomly generated 3 objective knapsack, assignment and travelling salesman problems used to test optimisation algorithms.<br><br>These are generated using similar techniques to those of Laumanns et al. (2006) (for knapsack problems), Przybylski et al. (2010) (for assignment problems), and Özpeynirci and Köksalan (2010) (for traveling salesman problems). A knapsack instance is generated by randomly assigned an integer weight (uniformly at random in the range {60, ... , 100}) to each of n items. The upper bound on the total weight of the selected items is set to be half of the total weight of all items. Each objective function is chosen in a similar manner, with the coefficients for each item drawn uniformly<br>at random from the range {[60, ... , 100}.<br><br>Assignment problems are generated in the manner of Przybylski et al. (2010), with objective function coefficients drawn uniformly at random from {0, ... , 20}. We also generate instances of the traveling salesman problem as per Özpeynirci and Köksalan (2010). We place cities on a 1000 × 1000 plane by assigning integer coordinates to cities, and round the Euclidean distance between any two cities to an integer value.<br><br>Finally some non-Euclidean traveling salesman problems are generated by assigning distances between towns uniformly at random from {20, ..., 180}. Note that these distances will not satisfy common properties of distances or norms (such as the triangle inequality).<br><br>Laumanns M, Thiele L, Zitzler E (2006) An efficient, adaptive parameter variation scheme for metaheuristics based on the epsilon-constraint method. European Journal of Operational Research 169(3):932 – 942, ISSN 0377-2217, URL http://dx.doi.org/http://dx.doi.org/10.1016/j.ejor.2004.08.029.<br><br>Przybylski A, Gandibleux X, Ehrgott M (2010) A two phase method for multi-objective integer programming and its application to the assignment problem with three objectives. Discrete Optimization 7(3):149 – 165, ISSN 1572-5286, URL http://dx.doi.org/https://doi.org/10.1016/j.disopt.2010.03.005.<br><br>Özpeynirci O, Köksalan M (2010) An exact algorithm for finding extreme supported nondominated points of multiobjective mixed integer programs. Management Science 56(12):2302–2315, URL http://dx.doi.org/10.1287/mnsc.1100.1248.<br><br>These use an extended LP file format where multiple objectives are defined as additional constraints after the original problem's constraints. The right-hand-side value of the last constraint defines the number of objectives.
DOI: 10.17632/3rmy9fzx32
title: Simulation Files

description: This file includes the simulation file related to the data in brief article entitled "Data on Reducing Carbon Footprint in Microgrids using Distributed Battery Energy Storage".
DOI: 10.17632/5s8r9ndfvc
title: NERSkill.Id

description: NERSkill.Id stands out as the initial annotated corpus designed specifically for NER datasets emphasizing skill entities in the Indonesian language. This marks a valuable addition to the existing resources for Natural Language Processing (NLP) in Indonesian. Despite its relatively compact size, NERSkill.Id holds considerable promise for refining language models. Moreover, its integration with larger pre-existing corpora can enhance the training of more extensive and versatile mixed Indonesian models tailored for diverse NLP tasks.
The dataset categorizes named entities into three distinct classes: hard skill, soft skill, and technology. It consists of 418.868 tokens. Subsequently, these tokens are marked using the BIO format. The annotation table is presented in ConLL2003 format, consisting of three columns: Sentence#, word, and tag columns.

*We already have paper at https://www.sciencedirect.com/science/article/pii/S235234092400163X (please cite)
DOI: 10.6084/m9.figshare.11907858.v1
title: Fast talkers? Investigating the influence of self-talk on mental toughness and finish times in 800-meter runners

description: The purpose of this study was to explore whether a personalized self-talk intervention influenced mental toughness, rating of perceived exertion, sense of the urge to slow down, perceived performance and finish times in a series of 800-meter run time trials. While mental toughness has been associated with improved endurance performance, the effect of changing an individual’s momentary self-talk on mental toughness and finish time has not yet been examined. This single-subject, multiple baseline design case study incorporated three participants who each ran a series of 11 − 13 maximum effort 800-meter time trials on the track, separated by a minimum of two days, across ten weeks. Following an initial series of four to six baseline sessions, they were each then provided a personalized self-talk intervention before running the seven additional sessions. Visual analysis (including review of non-overlapping data points between baseline, intervention, and follow-up sessions) demonstrated the personalized self-talk intervention positively influenced mental toughness and finish times across all three participants but did not consistently affect the rating of perceived exertion, urge to slow down or perceived performance. Additional insights were identified through the integration of social validation interviews informally after each run session and then formally after the intervention. These insights included identifying a new baseline of effort accompanied by different levels of mental toughness and an intrigue on the part of participants about the notable improvement in outcomes in spite of previously perceived “all-out” effort. <i>Lay Summary:</i> Mental toughness variability and 800 meter finish times were both positively influenced by a personalized self-talk intervention in runners. In addition, as mental toughness increased, 800 meter finish times improved.
DOI: 10.6084/m9.figshare.6729143.v4
title: Partition file of 13 CDS and 2 rRNAs by IQ-TREE

description: Partition file of 13 CDS and 2 rRNAs by IQ-TREE
DOI: 10.6084/m9.figshare.17280200.v1
title: Gossypium longicalyx (F1) genome

description: The reference-grade cotton genome assembly and annotation of Gossypium longicalyx (F1) using Oxford Nanopore sequencing technology.
DOI: 10.6084/m9.figshare.20647788.v3
title: TabRecSet: A Large Scale Dataset for End-to-end Table Recognition in the Wild

description: Version 3 (Alpha version 1). Share same json annotations.
DOI: 10.17632/2cf9h5d8tf
title: Effect of fresh and fermented olive oil solid waste on nitrogen utilization coefficient for crops

description: Dataset about Effect of fresh and fermented olive oil solid waste on nitrogen utilization coefficient for crops. Linked to this preprint https://www.preprints.org/manuscript/202212.0100/v1
DOI: 10.17632/hbc5g2gwpv
title: Generalized Art Song Anthologies and Reference Materials Raw Data

description: Objective: This study examines the demographic makeup of composers in Western classical art song musical anthologies and reference materials.

Design: Generalized (non-composer specific) musical anthologies (n = 379) and reference books (n = 29) were collected through commercial search engines, publisher websites, academic libraries, and private collections. Every composer’s gender, race, sexuality, birth nationality, approximate musical period, and number of competitions were collated and categorized from each resource.

Methods: Definitions for demographic information were adapted from the United States Census Bureau and Human Rights Campaign to center the lens of a contemporary user’s experience engaging with these texts. Basic statistics calculated using the composer’s demographic information were multiplied by their total number of compositions to capture an aggregate understanding of what identities are likely to be encountered in such a resource.

Results: Data collection yielded 12321 composers (unique n = 3971) and 56847 songs with repetition. Generalized resources tend to contain the music of a specific demographic of composers. Songs were primarily written by straight (n = 43795, 77.0%), white (n = 55661, 97.9%), male (n = 53864, 94.8%) composers.

Conclusions: The conjunct and widespread use of anthologies representing a select portion of the available repertoire with unknown editorial impartiality could reinforce canonic ideology by limiting student and faculty exposure to diverse repertoires. A “French Song” anthology is unlikely to have any women, BIPOC, or queer representation unless designed as a “Women in French Song,” “BIPOC French Composers,” or “Art Song by Queer French Composers” resource instead.
DOI: 10.6084/m9.figshare.25470241.v2
title: CV analysis_IC2316932

description: A. Mrzygłód, M. Rzonsowska, M. P. García-Armada, B. Dudziec, M. Nowicki<br>Metallodendrimers Unveiled: Investigating the Formation and Unique Features of Double-Decker Silsesquioxane-Based Silylferrocene Dendrimers<br>Inorg. Chem. 2023, 62, 41, 16932–16942<br>Metadata for CV analysis<br>sample denoted as 1426 - in publication it is G1-DDSQ-Fc8sample denoted as 1427 - in publication it is G2-DDSQ-Fc16
DOI: 10.6084/m9.figshare.25517497.v2
title: Human and mouse IZ, TTR, termination sites, Twidth

description: Data discussed in High-resolution Repli-Seq defines the temporal choreography of initiation, elongation and termination of replication in mammalian cells.<b>Zhao PA</b>, <b>Sasaki T</b>, Gilbert DM.Genome Biol. 2020 Mar 24;21(1):76. doi: 10.1186/s13059-020-01983-8.PMID: 32209126<br>
DOI: 10.6084/m9.figshare.11771289.v2
title: Egg transcriptome assembly of Meloidogyne enterolobii (INRA/JKI)

description: From the raw Illumina reads, adapters and low quality regions (Phred score &lt;30) as well as regions that contained 2 or more consecutive ambiguous nucleotides were cropped using prinseq resulting in 54,424,802 cleaned paired-end reads. The clean reads were assembled using CLC Genomics Workbench 9.0 (https://www.qiagenbioinformatics.com/) with automatic bubble size and word size estimation, in simple contig mode, and minimum contig length of 200.
DOI: 10.6084/m9.figshare.25329073.v1
title: Silva SSU r138.1 training set for IDTAXA

description: Training set for Silva 138.1 for use with the IDTAXA taxonomy caller within the R DECIPHER packageCitation for DECIPHER: Wright ES (2016). “Using DECIPHER v2.0 to Analyze Big Biological Sequence Data in R.” <i>The R Journal</i>, <b>8</b>(1), 352-359.
DOI: 10.17632/8d3t32spg7
title: Data for: Publication bias among prognostic accuracy studies of middle cerebral artery Doppler ultrasound

description: 1. Complete research dataset 2. List with excluded conference abstracts 3. List with excluded full text articles
DOI: 10.6084/m9.figshare.19326047.v1
title: Data and code from "Fossil leaves reveal drivers of herbivore functional diversity during the Cenozoic"

description: This package contains data of insect damage on fossil leaves from 32 fossil floras at 16 locations in central Europe, Iceland and Svalbard covering the entire Cenozoic period (66 to 2 million years ago). Along with the raw data we provide R code to reproduce the analysis from the paper. For details about how to run the R code please have a look at the README.txt file in the package. For details about the methods (e.g., field sampling or background of particular analyses) we refer to the original publication.
DOI: 10.6084/m9.figshare.24191130.v2
title: Training Dataset and Supplementary Information

description: Suuplementary Data for the submission titled Convolutional Neural Network Based Methodology for Flexible Phase Prediction of High Entropy AlloysData used in Training of a neural network based High Entropy Alloy phase prediction model. All data is pulled from published research articles, reference DOIs are included in the final column. Initial data sourced from https://doi.org/10.1016/j.dib.2021.107346 and reformatted/supplemented
DOI: 10.6084/m9.figshare.25323370.v1
title: Genome sequences, proteins, cds, and annotation files of Musa ornata and Musa velutina

description: Musa ornata and M. velutina are members of the Musaceae family and are indigenous to the South and Southeast Asia. They are very popular in the horticultural market, but the lack of genomic sequencing data and genetic studies has hampered efforts to improve their ornamental value. In this study, we generated the first chromosome-level genome assemblies for both species by utilizing Oxford Nanopore long reads and Hi-C reads.<br>
DOI: 10.6084/m9.figshare.5554534.v1
title: Experiment CLA-SubjectE-160122-3States

description: Experiment in which subject performed 3 imageries of left and right hand motion and a passive state.
DOI: 10.6084/m9.figshare.23615607.v1
title: Google-synth: A Synthesized Punjabi Speech Dataset

description: The Google-synth dataset comprises a synthetic Punjabi dataset that has been generated using Google's Cloud Text-to-Speech service. This dataset encompasses approximately 50,000 synthesized utterances, featuring four synthetic speakers (two male and two female), which amounts to approximately 38 hours of audio data. To facilitate training, validation, and testing, the dataset has been pre-divided into three portions: 80% for training, 10% for validation, and 10% for testing. The dataset is meticulously organized, with all speech files stored in the "clips" directory. The corresponding transcript files (train, dev, and test) are situated in the parent directory and follow the TSV (Tab-Separated Values) format. Each line within the transcript files represents a label assigned to a particular speech sample from the clips directory. The first column of each line contains the path and name of the corresponding WAV file, while the second column, separated by a tab, contains the transcript in textual form.
DOI: 10.6084/m9.figshare.23987397.v1
title: scs_its

description: Estimating the Energy Flux of Internal Tides in the Northern South China Sea Using Underwater Gliders
DOI: 10.6084/m9.figshare.3565023.v1
title: Appendix D. Results of the encounters between neighboring corals at the Exposed Pools, 1962–1989.

description: Results of the encounters between neighboring corals at the Exposed Pools, 1962–1989.
DOI: 10.17632/r89dt8mdzk
title: Linking outsourcing with organizational structure and culture and their impact on operational performance: A guidance for analysis

description: This data was used to investigate the impact of outsourcing on the operational performance in industrial companies in Jordan. It also tested the effect of the organizational structure and organizational culture as mediator variables. In order to achieve this goal, a questionnaire was developed based on the previous literature, the face and content validity evaluated. In order to ascertain the construct validity, converging and discriminant validity, a confirmatory factor analysis was carried out using AMOS 24 software in order to fit the measurement model with the sample data selected from industrial companies in Jordan, and to confirm the validity and reliability of the scale.
DOI: 10.17632/sd3df9x772
title: Nusser et al_themes_and_lifeperiods_long

description: The analyses and results of the manuscript entitled "Themes of Trust, Identity, Intimacy, and Generativity in Important Autobiographical Memories: Associations with Life Periods and Life Satisfaction" (submitted) are based on these two datasets. The first dataset (themes_and_lifeperiods_long) contains 1426 important autobiographical memories of older adults and participants' ratings of developmental themes (trust, identity, intimacy, generativity) represented in important autobiographical memories as well as age at the time of the event. The second dataset (themes_and_lifesatisfaction_wide) contains the restructured data with the developmental theme and emotional valence ratings aggregated across participants as well as life satisfaction. 
First, we examined to which extent autobiographical memories reflect important developmental themes such as trust, identity, intimacy, or generativity and whether the events remembered were experienced during the life period in which the respective theme is expected to be most salient. Second, we investigated how developmental themes represented in important autobiographical memories (i.e., the life story) contribute to a person’s life satisfaction, and whether this association depends on the emotional evaluation of the life story.
DOI: 10.6084/m9.figshare.28676228.v2
title: 炎症因子在肠道菌群与子宫内膜癌关系中的中介作用： 一项孟德尔随机化研究无标题项目

description: This dataset includes the results from a Mendelian randomization study investigating the mediating role of inflammatory factors in the relationship between gut microbiota and endometrial cancer. The study leverages genetic instruments to assess causal relationships between these factors, providing insights into how gut microbiota influences endometrial cancer through inflammation.<b>GWAS Summary Data</b>: Data used for the genetic analysis of gut microbiota and inflammatory factors.<b>R Script</b>: The R code used for performing statistical analyses and generating results.<b>Processed Results</b>: Data files containing the final analysis results.