cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.3a9nkv
title: Occurrence Download

description: A dataset containing 4322 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hedera helix L."
 ]
}

 The dataset includes 4322 records from 261 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0289820-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zsh7ff
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corynorhinus rafinesquii (Lesson, 1827)",
 "Year 2021-2023"
 ]
}

 The dataset includes 29 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0281719-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zbek89
title: Occurrence Download

description: A dataset containing 7050 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is NZCS Brownsberg Nature Park Camera trap Monitoring 2013-2015"
 ]
}

 The dataset includes 7050 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0293932-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yhtk5d
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neostapfiella chloridiantha A.Camus"
 ]
}

 The dataset includes 30 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046543-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.765ze9
title: Occurrence Download

description: A dataset containing 1166 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hydrocotyle verticillata Thunb."
 ]
}

 The dataset includes 1166 records from 132 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0289836-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u6aw37
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Corynorhinus rafinesquii (Lesson, 1827)",
 "Year 2021-2023"
 ]
}

 The dataset includes 29 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0281722-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.etvps8
title: Occurrence Download

description: A dataset containing 677 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Melaniparus leuconotus (Guérin-Méneville, 1843))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 677 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0293912-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mzzuep
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neostapfiella perrieri A.Camus"
 ]
}

 The dataset includes 77 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046545-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.286zqr
title: Occurrence Download

description: A dataset containing 402 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hedera hibernica Poit."
 ]
}

 The dataset includes 402 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0289822-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cpngza
title: Occurrence Download

description: A dataset containing 924700 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Royal Botanic Gardens, Kew - Herbarium Specimens"
 ]
}

 The dataset includes 924700 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003413-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7mnpny
title: Occurrence Download

description: A dataset containing 616 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Leontopithecus rosalia (Linnaeus, 1766)"
 ]
}

 The dataset includes 616 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0293915-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hp34sg
title: Occurrence Download

description: A dataset containing 201 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Munida tenuimana G.O.Sars, 1872",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 "DecimalLatitude is greater than -90",
 "DecimalLongitude is greater than -180",
 "Year is less than or equal to 2014",
 "Year is greater than or equal to 1850"
 ]
}

 The dataset includes 201 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0289825-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x6njbx
title: Occurrence Download

description: A dataset containing 79584 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acrocomia aculeata (Jacq.) Lodd. ex R.Keith, Acrocomia crispa (Kunth) C.F.Baker ex Becc., Acrocomia emensis (Toledo) Lorenzi, Acrocomia glaucescens Lorenzi, Acrocomia intumescens Drude, Acrocomia totai Mart., Aiphanes acaulis Galeano & R.Bernal, Aiphanes buenaventurae R.Bernal & Borchs., Aiphanes erinacea (H.Karst.) H.Wendl., Aiphanes gelatinosa H.E.Moore, Aiphanes hirsuta Burret, Aiphanes horrida (Jacq.) Burret, Aiphanes killipii (Burret) Burret, Aiphanes lindeniana (H.Wendl.) H.Wendl., Aiphanes linearis Burret, Aiphanes minima (Gaertn.) Burret, Aiphanes parvifolia Burret, Aiphanes tricuspidata Borchs., M.Ruíz & Bernal, Aiphanes ulei (Dammer) Burret, Astrocaryum acaule Mart., Astrocaryum aculeatum G.Mey., Astrocaryum alatum H.F.Loomis, Astrocaryum campestre Mart., Astrocaryum echinatum Barb.Rodr., Astrocaryum ferrugineum F.Kahn & B.Millán, Astrocaryum gynacanthum Mart., Astrocaryum malybo H.Karst., Astrocaryum mexicanum Liebm. ex Mart., Astrocaryum murumuru Mart., Astrocaryum standleyanum L.H.Bailey, Astrocaryum triandrum Galeano, R.Bernal & F.Kahn, Astrocaryum ulei Burret, Bactris barronis L.H.Bailey, Bactris bidentula Spruce, Bactris brongniartii Mart., Bactris caryotifolia Mart., Bactris charnleyae de Nevers, A.J.Hend. & Grayum, Bactris coloniata L.H.Bailey, Bactris coloradonis L.H.Bailey, Bactris concinna Mart., Bactris elegans Schaedtler, Bactris fissifrons Mart., Bactris gasipaes Kunth, Bactris glandulosa Oerst., Bactris glaucescens Drude, Bactris gracilior Burret, Bactris hirta Mart., Bactris macroacantha Mart., Bactris major Jacq., Bactris manriquei R.Bernal & Galeano, Bactris maraja Mart., Bactris mexicana Mart., Bactris militaris H.E.Moore, Bactris neomilitaris de Nevers & A.J.Hend., Bactris obovata H.Wendl. ex Schaedtler, Bactris panamensis de Nevers & Grayum, Bactris pickelii Burret, Bactris pilosa H.Karst., Bactris plumeriana Mart., Bactris setosa Mart., Bactris setulosa H.Karst., Bactris simplicifrons Mart., Desmoncus mitis Mart., Desmoncus polyacanthos Mart.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 }
 ]
}

 The dataset includes 79584 records from 394 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046552-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ba3cqv
title: Occurrence Download

description: A dataset containing 540 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Chloroleucon acacioides (Ducke) Barneby & J.W.Grimes, Pithecellobium acacioides Ducke)"
 ]
}

 The dataset includes 540 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0282472-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eaysdu
title: Occurrence Download

description: A dataset containing 2884366 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "DatasetKey is EOD – eBird Observation Dataset"
 ]
}

 The dataset includes 2884366 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000212-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bnp4xs
title: Occurrence Download

description: A dataset containing 1717 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Poidium calotheca (Trin.) Matthei"
 ]
}

 The dataset includes 1717 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000240-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n453t7
title: Occurrence Download

description: A dataset containing 5599 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anemone rubra Jord., 1860, Anemone rubra Lam., Anemone rubra var. serotina (H.J.Coste) B.Bock, Anemone rubra var. rubra, Anemone pratensis subsp. rubra (Lam.) O.Bolòs & Vigo, Anemone pulsatilla subsp. rubra (Lam.) Rouy & Foucaud, Anemone nemorosa var. rubra Pritz., Anemone quinquefolia f. rubra J.W.Moore, Anemone pulsatilla var. rubra (Lam.) DC.)"
 ]
}

 The dataset includes 5599 records from 169 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000239-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.86n7ap
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Garra flavatra Kullander & Fang, 2004"
 ]
}

 The dataset includes 29 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000241-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.20391/b5f69b03-01dc-42cd-9c25-f2ec07c5fd1c
title: Academic Impostor Syndrome Validation Data

description: Survey data in SPSS format to validate a measure of Academic Impostor Syndrome (AIS) alongside psychological correlates (Personality and Self-Efficacy).
DOI: 10.6084/m9.figshare.21550588
title: Molecular docking, dynamics simulation and pharmacokinetic studies of <i>Cyperus articulatus</i> essential oil metabolites as inhibitors of <i>Staphylococcus aureus</i>

description: <i>Cyperus articulatus</i> has been extensively studied for its essential oil (EO), active components and antibacterial activities against a wide range of bacteria such as <i>Bacillus megaterium</i>, <i>Streptococcus pyogenes</i>, <i>Staphylococcus epidermidis</i>, <i>Escherichia coli</i> and <i>Staphylococcus aureus</i>. However, knowledge of the biomolecular interaction of the individual EO metabolites responsible for its inhibition activities is lacking. The multi-drug-resistant bacteria <i>S. aureus</i>, which is of prime concern, has been reported to be inhibited by <i>Cyperus articulatus</i> rhizome EO. The present work analyzed the molecular interactions of the major <i>Cyperus articulatus</i> rhizome EO metabolites with the target enzyme TyrRS of <i>S. aureus</i> and studied the conformational dynamics and stability of the protein-ligand complexes. Molecular docking studies of selected EO metabolites such as mustakone, longifolenaldehyde, cyperotundone, α-copaene, β-calacorene, α-calacorene and khusinol were conducted along with standard drug chloramphenicol for comparative analysis of their binding affinity with <i>S. aureus</i> TyrRS. The metabolites khusinol, mustakone, β-calacorene and α-calacorene generated comparable docking scores (−6.4, −6.2, −6.1 and −6.2 kcal/mol, respectively) with that of the drug chloramphenicol (−6.3 kcal/mol). Most EO metabolites did not exhibit H-bonding with the <i>S. aureus</i> TyrRS residues and were stabilized through pi-interactions. The MD simulation study illustrated that compounds like mustakone could effectively bind to the receptors of <i>S. aureus</i> TyrRS with high stability and integrity. Pharmacokinetic, drug-like properties and toxicity analysis of the EO metabolites supported the candidature of mustakone and khusinol as pharmacologically important antibacterial drug ingredients. The study envisaged the structural framework of the EO metabolites for antibacterial drug design. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.21550588.v1
title: Molecular docking, dynamics simulation and pharmacokinetic studies of <i>Cyperus articulatus</i> essential oil metabolites as inhibitors of <i>Staphylococcus aureus</i>

description: <i>Cyperus articulatus</i> has been extensively studied for its essential oil (EO), active components and antibacterial activities against a wide range of bacteria such as <i>Bacillus megaterium</i>, <i>Streptococcus pyogenes</i>, <i>Staphylococcus epidermidis</i>, <i>Escherichia coli</i> and <i>Staphylococcus aureus</i>. However, knowledge of the biomolecular interaction of the individual EO metabolites responsible for its inhibition activities is lacking. The multi-drug-resistant bacteria <i>S. aureus</i>, which is of prime concern, has been reported to be inhibited by <i>Cyperus articulatus</i> rhizome EO. The present work analyzed the molecular interactions of the major <i>Cyperus articulatus</i> rhizome EO metabolites with the target enzyme TyrRS of <i>S. aureus</i> and studied the conformational dynamics and stability of the protein-ligand complexes. Molecular docking studies of selected EO metabolites such as mustakone, longifolenaldehyde, cyperotundone, α-copaene, β-calacorene, α-calacorene and khusinol were conducted along with standard drug chloramphenicol for comparative analysis of their binding affinity with <i>S. aureus</i> TyrRS. The metabolites khusinol, mustakone, β-calacorene and α-calacorene generated comparable docking scores (−6.4, −6.2, −6.1 and −6.2 kcal/mol, respectively) with that of the drug chloramphenicol (−6.3 kcal/mol). Most EO metabolites did not exhibit H-bonding with the <i>S. aureus</i> TyrRS residues and were stabilized through pi-interactions. The MD simulation study illustrated that compounds like mustakone could effectively bind to the receptors of <i>S. aureus</i> TyrRS with high stability and integrity. Pharmacokinetic, drug-like properties and toxicity analysis of the EO metabolites supported the candidature of mustakone and khusinol as pharmacologically important antibacterial drug ingredients. The study envisaged the structural framework of the EO metabolites for antibacterial drug design. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.21493292
title: Phytochemical study of <i>Lantana camara</i> flowers, ecotoxicity, antioxidant, <i>in vitro</i> and <i>in silico</i> acetylcholinesterase: molecular docking, MD, and MM/GBSA calculations

description: <i>Lantana camara</i> L. (Verbenaceae), commonly called lead cambará, has often been used in folk medicine as antiseptic, antispasmodic, against hemorrhages, flu, colds, and diarrheic. This plant is considered a weed and an ornamental and medicinal plant and is an essential source of natural organic compounds, mainly flavonoids. This work aims to investigate the chemical composition and evaluate the biological properties such as antioxidant and acetylcholinesterase of the constituents from <i>L. camara</i> flowers. In addition, the computational simulation was carried out with the constituents identified. The results showed that methanolic extract of the flowers of <i>L. camara</i> presents toxicity, antioxidant activity with 97.8% inhibition percentage in the concentration of 0.25 mg mL<sup>−1</sup> against the DPPH radical, and acetylcholinesterase activity. The phytochemical study of extract from <i>L. camara</i> flowers resulted in LC-MS identification of 18 polyphenolic compounds, such as phenolic acid derivatives, phenylethanoid glycosides, and flavonoids. In the <i>in silico</i> study, flavonoid isoverbascoside showed affinity energy of −9.9 kcal.mol<sup>−1</sup> with the AChE enzyme. Their phytochemical content, mainly the presence of flavonoids and phenolic compounds in <i>L. camara</i> extracts, may be related to the antioxidant and anticholinesterase potential observed. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.21493292.v1
title: Phytochemical study of <i>Lantana camara</i> flowers, ecotoxicity, antioxidant, <i>in vitro</i> and <i>in silico</i> acetylcholinesterase: molecular docking, MD, and MM/GBSA calculations

description: <i>Lantana camara</i> L. (Verbenaceae), commonly called lead cambará, has often been used in folk medicine as antiseptic, antispasmodic, against hemorrhages, flu, colds, and diarrheic. This plant is considered a weed and an ornamental and medicinal plant and is an essential source of natural organic compounds, mainly flavonoids. This work aims to investigate the chemical composition and evaluate the biological properties such as antioxidant and acetylcholinesterase of the constituents from <i>L. camara</i> flowers. In addition, the computational simulation was carried out with the constituents identified. The results showed that methanolic extract of the flowers of <i>L. camara</i> presents toxicity, antioxidant activity with 97.8% inhibition percentage in the concentration of 0.25 mg mL<sup>−1</sup> against the DPPH radical, and acetylcholinesterase activity. The phytochemical study of extract from <i>L. camara</i> flowers resulted in LC-MS identification of 18 polyphenolic compounds, such as phenolic acid derivatives, phenylethanoid glycosides, and flavonoids. In the <i>in silico</i> study, flavonoid isoverbascoside showed affinity energy of −9.9 kcal.mol<sup>−1</sup> with the AChE enzyme. Their phytochemical content, mainly the presence of flavonoids and phenolic compounds in <i>L. camara</i> extracts, may be related to the antioxidant and anticholinesterase potential observed. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.21561857
title: In silico evaluation of the inhibitory potential of nucleocapsid inhibitors of SARS-CoV-2: a binding and energetic perspective

description: The COVID-19 outbreak brought on by the SARS-CoV-2 virus continued to infect a sizable population worldwide. The SARS-CoV-2 nucleocapsid (N) protein is the most conserved RNA-binding structural protein and is a desirable target because of its involvement in viral transcription and replication. Based on this aspect, this study focused to repurpose antiviral compounds approved or in development for treating COVID-19. The inhibitors chosen are either FDA-approved or are currently being studied in clinical trials against COVID-19. Initially, they were designed to target stress granules and other RNA biology. We have utilized structure-based molecular docking and all-atom molecular dynamics (MD) simulation approach to investigate in detail the binding energy and binding modes of the different anti-N inhibitors to N protein. The result showed that five drugs including Silmitasterib, Ninetanidinb, Ternatin, Luteolin, Fedratinib, PJ34, and Zotatafin were found interacting with RNA binding sites as well as to predicted protein interface with higher binding energy. Overall, drug binding increases the stability of the complex with maximum stability found in the order, Silmitasertib &gt; PJ34 &gt; Zotatatafin. In addition, the frustration changes due to drug binding brings a decrease in local frustration and this decrease is mainly observed in α-helix, β3, β5, and β6 strands and are important for drug binding. Our in-silico data suggest that an effective interaction occurs for some of the tested drugs and prompt their further validation to reduce the rapid outspreading of SARS-CoV-2. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.21561857.v1
title: In silico evaluation of the inhibitory potential of nucleocapsid inhibitors of SARS-CoV-2: a binding and energetic perspective

description: The COVID-19 outbreak brought on by the SARS-CoV-2 virus continued to infect a sizable population worldwide. The SARS-CoV-2 nucleocapsid (N) protein is the most conserved RNA-binding structural protein and is a desirable target because of its involvement in viral transcription and replication. Based on this aspect, this study focused to repurpose antiviral compounds approved or in development for treating COVID-19. The inhibitors chosen are either FDA-approved or are currently being studied in clinical trials against COVID-19. Initially, they were designed to target stress granules and other RNA biology. We have utilized structure-based molecular docking and all-atom molecular dynamics (MD) simulation approach to investigate in detail the binding energy and binding modes of the different anti-N inhibitors to N protein. The result showed that five drugs including Silmitasterib, Ninetanidinb, Ternatin, Luteolin, Fedratinib, PJ34, and Zotatafin were found interacting with RNA binding sites as well as to predicted protein interface with higher binding energy. Overall, drug binding increases the stability of the complex with maximum stability found in the order, Silmitasertib &gt; PJ34 &gt; Zotatatafin. In addition, the frustration changes due to drug binding brings a decrease in local frustration and this decrease is mainly observed in α-helix, β3, β5, and β6 strands and are important for drug binding. Our in-silico data suggest that an effective interaction occurs for some of the tested drugs and prompt their further validation to reduce the rapid outspreading of SARS-CoV-2. Communicated by Ramaswamy H. Sarma