cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/394p49bvgd
title: ChIP sequencing of BATF2 in human astrocytes treated with interferon-gamma

description: Commercially available (ScienCell Research Laboratories) primary human spinal cord astrocytes were treated with 10ng/ml interferon-gamma for 24 hours and chromatin immunoprecipitation sequencing was performed commercially by Active Motif Services using a validated antibody to BATF2 (Proteintech).
DOI: 10.17632/75mvf32r9d
title: Three Terminal Capacitive Dilatometer

description: We designed Three Terminal Capacitance Dilalatometer (h=32mm, w=21mm) for low temperature thermal expansion measurements. Our data includes the measurement of themperature dependant capaitance and the conversion of capacitance to equivalent length change of the sample. The Dilatometer is tested by measuring the samples with known thermal expansion and compared with reported literature.  The fractional length change data measured using our modified Dilatometer is in good agreement with reported one. Moreover, our design eliminate the use of kapton foil in the cell that contributes non-linearly to the thermal expansion and also does not require the use of an adhesive like Stycast which tends to crack after thermal cycling resulting in an electrical short between the capacitor plates and the cell body. We have used Alumina washers for providing insulation between the plates and the cell body.
DOI: 10.17632/wz8dncmc2p
title: data for evolutive analysis of insulin related peptides in bilaterian species

description: In bilaterian species, the amino acid sequence conservation between Insulin related peptides is relatively low except for the cysteine residues involved in the disulphide bonds. In the A chain, the conserved cystein residues are included in a signature motif. Investigating the variations in this motif would give insight into the phylogenetic history of the family. The table presented in this paper contains a large set of insulin-related peptides in bilateral phylogenetic groups (deuterostomian, ecdysozoan, lophotrochozoan). NCBI databases in silico wide screening combined with bibliographic researches provided a framework for identifying and categorising the structural characteristics of these insulin related peptides. The dataset includes NCBI IDs of each sequence with hyperlinks to FASTA format. Moreover, the structural type (α, β or γ), the A chain motif, the total number of cysteins, the C peptide cleavage mode and the potential additional domains (D or E) are specified for each sequence. The data are associated with the research article “Molecular evolution and functional characterisation of insulin-related peptides in molluscs: contributions of Crassostrea gigas genomic and transcriptomic-wide screening” [1].
DOI: 10.17632/fz52p6zxyy
title: Average grain size and cooling curves of different Zn-Ag alloys under various pulsed magnetic fields

description: Raw data of the average grain size and cooling curves of different Zn-Ag alloys under various pulsed magnetic fields. The average size was measured using the line intercept method according to GBT6394-2002 standard.
DOI: 10.17632/b485247sg6
title: #metooinceste

description: Tweets that used the hashtag #metooinceste between 20-27 January 2021
DOI: 10.17632/4tp4tdkfdb
title: Data for: A comparative adsorption study of benzophenone-3 onto synthesized lipophilic organosilicate, Laponite and montmorillonite

description: In this study, the adsorption of a hydrophobic molecule, benzophenone-3 (BZ-3) was investigated onto three adsorbents: synthesized lipophilic organosilicate (OSL), Laponite (Lap) and montmorillonite (Mt). A comparative study for all adsorbents with batch adsorption experiments was achieved to determine the optimal conditions. The effects of the main experimental parameters were determined such as solvent, pH, temperature, initial concentration of BZ-3 and contact time. The adsorption capacity was evaluated by means of HPLC analysis equipped with UV detection and the adsorbent - BZ-3 complexes were characterized by means of Dynamic Light Scattering (DLS) analysis and Attenuated Total Reflectance - Fourier Transform InfraRed (ATR - FTIR) spectroscopy. Finally, the adsorption isotherm equilibrium was described according to Langmuir, Freundlich and Temkin models. The results showed that optimal value of the adsorbed BZ-3 for all adsorbents was found at pH 10, at 38 °C, with BZ-3 concentration of 2.5 g/L during 24 h of contact time. The results obtained showed a promising capacity of the OSL to adsorb BZ-3 (340 mg of BZ-3/g of adsorbent) compared to Lap (137 mg/g) and Mt (192.3 mg/g). Langmuir model fitted the best with OSL and Mt adsorption while Freundlich model fitted the best with Lap adsorption.
DOI: 10.17632/59dvjjcs4z
title: Dataset for Bacillus_inaquosorum_LBA001

description: Whole genome sequence data obtained from the sequencing and the analysis of Bacillus inaquosorum LBA001 a pigment-producing Bacillus species
DOI: 10.17632/zsmxd554bf
title: Data for: Discharge and electrothermal efficiency analysis of capacitive discharge plasma synthetic jet actuator

description: Supplementary material_Fitting formula
DOI: 10.17632/9h9c9fmb6w
title: Family-centered empowerment approach to optimize phosphate management among hemodialysis patients

description: This study aimed to investigate the effect of a family-centered empowerment program on hyperphosphatemia management.
DOI: 10.17632/b6sgmp56mj
title: Evaluation of sustainable construction understanding among AEC professionals

description: The questionnaire and responses of the evaluation of sustainable construction understanding among AEC professionals in Nigeria's AEC industry
DOI: 10.17632/nbb2ntpdw5
title: Data for: Concept Embedding to Measure Semantic Relatedness for Biomedical Information Ontologies
DOI: 10.17632/wnv7sdwh4t
title: Good And Bad Classification Of Paneer

description: Project Title: Good and Bad Classification of Paneer

Data Overview:

This dataset is designed for the binary classification problem of distinguishing between good-quality and bad-quality paneer samples. It contains a total of 1,000 paneer samples, evenly split between 500 good-quality and 500 bad-quality samples. The dataset is structured to support the development and evaluation of machine learning models aimed at automating the quality assessment of paneer based on a set of relevant features.

Data Structure:

Each record in the dataset corresponds to a specific paneer sample, with both good and bad classifications labeled accordingly. The data contains the following features, which were selected based on their relevance to determining paneer quality:

Sensory Features:

Texture: Quantitative or categorical assessment of the paneer's texture, ranging from soft to firm.
Color: A measure of the paneer’s color, quantified using a color scale or RGB values.
Odor: Odor intensity or specific notes that can indicate spoilage or freshness, captured using a scoring system or categorical labels.
Taste: Panel scores or taste descriptors to indicate sweetness, sourness, bitterness, or other taste profiles.
Physical Features:

Moisture Content (%): Measured moisture level, which can affect the paneer’s texture and shelf life.
pH Level: The acidity or alkalinity of the paneer sample, influencing spoilage and taste.
Fat Content (%): Fat percentage, which may vary between good and bad samples due to spoilage or production methods.
Ash Content (%): Indicative of mineral content, ash level can also serve as a marker for quality degradation.
Chemical Composition:

Protein Content (%): Protein level, which can indicate the nutritional value and potential spoilage.
Lactose Content (%): Lactose levels, which can affect taste and freshness.
Free Fatty Acids (FFA %): Elevated levels of FFAs can suggest spoilage or poor-quality paneer.
Thiobarbituric Acid Reactive Substances (TBARS): Used to measure lipid oxidation, which indicates rancidity in paneer samples.
Microbial Features:

Total Plate Count (TPC): Indicates the microbial load, with higher counts correlating with spoilage.
Yeast and Mold Count: Common in bad samples, high counts can signal contamination or spoilage.
Coliform Count: An indicator of potential contamination, common in bad-quality paneer samples.
Target Variable:

Class: Binary label indicating whether the sample is classified as good or bad (1 for good, 0 for bad).
Data Collection Process: The paneer samples were collected from various sources, including both controlled environments (e.g., dairy production units) and consumer environments (e.g., retail outlets). Sensory analysis was conducted by trained panelists, while physical, chemical, and microbial tests were performed using standard laboratory methods.

Use Cases:

Supervised Machine Learning Models: The dataset can be used to train models such as logistic regression, support vector machines
DOI: 10.17632/ww4nnpm4kj
title: Imaging Superficial Cervical Lymph Nodes in the EAE MS Model using CEST MRI, MALDI

description: CEST MRI, flow cytometry, MALDI data of superficial cervical lymph nodes in EAE mice over the course of the model
DOI: 10.17632/xnwjvk86bs
title: Transfer reaction code with nonlocal interactions

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract We present a suite of codes (NLAT for nonlocal adiabatic transfer) to calculate the transfer cross section for single-nucleon transfer reactions, ( d , N ) or ( N , d ) , including nonlocal nucleon–target interactions, within the adiabatic distorted wave approximation. For this purpose, we implement an iterative method for solving the second order nonlocal differential equation, for both scattering and bound states. The final observables that can be obtained with NLAT are differential angular... Title of program: NLAT Catalogue Id: AFAY_v1_0 Nature of problem Calculates cross sections for deuteron induced single-nucleon transfer reactions using nonlocal potentials within the adiabatic distorted wave approximation. Versions of this program held in the CPC repository in Mendeley Data AFAY_v1_0; NLAT; 10.1016/j.cpc.2016.06.022
DOI: 10.17632/dkt724c3nf
title: Foreign Direct Investment Inflows

description: FDI inflows in China
DOI: 10.17632/mw9rspm525
title: Target Finder - Data for: Avenues to the financial viability of microbial electrolysis cells [MEC] for domestic wastewater treatment and hydrogen production

description: This dataset was used to conduct the financial analysis of a microbial electrolysis cell for the treatment of domestic wastewater. Comparisons are made to activated sludge. The financial model was written in VBA code. The methods for this are described in the main manuscript. References for source data are listed in the spreadsheet labelled 'References'. Researchers in this field may analyse their own data so long as any credit is given to the original dataset in any published work, however we take no responsibility for any changes made to the original dataset or model (please read the license). Data should be inputted into the spreadsheet labelled 'MEC input data'. The model can be run by pressing the button labelled 'Run Target Finder' in the spreadsheet 'Target Finder'.
DOI: 10.17632/b9fz39cbn3
title: Sequences for metabolic engineering of Rhodococcus for biocatalysis

description: Sequences for metabolic engineering of Rhodococcus for biocatalysis consists of the following items:
Sequence1.M35_chromosome. Whole-genome sequence of R. rhodochrous M8-35 strain, chromosome part
Sequence2.M35_plasmid. Whole-genome sequence of R. rhodochrous M8-35 strain, plasmid part
Sequence3.M33_chromosome. Whole-genome sequence of R. rhodochrous M8-33 strain, chromosome part
Sequence4.M33_plasmid. Whole-genome sequence of R. rhodochrous M8-33 strain, plasmid part
Sequence5.M50_chromosome. Whole-genome sequence of R. rhodochrous M8-50 strain, chromosome part
Sequence6.M50_plasmid. Whole-genome sequence of R. rhodochrous M8-50 strain, plasmid part
Sequence7.pET16b-AamM8. Map and sequence of pET16b-AamM8 plasmid
Sequence8.pRY1. Map and sequence of pRY1 vector
Sequence9.pRY1-NHdel. Map and sequence of pRY1-NHdel plasmid
Sequence10.pRY1-fmdA2del. Map and sequence of pRY1 fmdA2del plasmid
Sequence11.pRY3-Rho. Map and sequence of pRY3-Rho shuttle vector
Sequence12.pRY3-Pnh-aam-cblA. Map and sequence of pRY3-Pnh-aam-cblA plasmid

Detailed description will be provided in the coming soon article.
DOI: 10.17632/fv6f9rpg5m
title: cisplatin-damaged gene locus-replicate 2-L-R1

description: Cisplatin is a DNA-targeting chemotherapeutic, yet its damaged gene loci are largely unexplored. We utilized a forward chemical genetics strategy to map 7578 cisplatin-damaged genes (CDGs) with &gt;12 fold-enrichment from A549 human lung cancer cells, of which the highly associated signalling pathways include sperm motility, molecular mechanism of cancer, and protein kinase A signalling. The three most frequently cisplatinated penta-nucleotide motifs and genomic region are CTGGG, CCAGG and GCTGG, and promoter, respectively. Among the CDGs are 1330 enzyme, 747 transcription regulator and 486 transporter genes. Importantly, cisplatin targeted 306 protein kinase genes, accounting for 59% of putative protein kinase genes in the human genome, and 92 protein phosphatase genes. This indicates that cisplatin genome-wide disturbs protein phosphorylation. This data set contains the original sequencing data of two biological replicates, matching results to the hg38 genome, and the analysis results of the distribution of the damage areas identified by the two sequencing results.
DOI: 10.17632/mvv9mv66sg
title: Data for: High serum adipocyte fatty acid binding protein levels linked with increased aortic arterial stiffness in patients with type 2 diabetes

description: Raw data of the high serum adipocyte fatty acid binding protein levels linked with increased aortic arterial stiffness in patients with type 2 diabetes
DOI: 10.17632/2pg9y47xc8
title: InfiniCharges: A tool for generating partial charges via the simultaneous fit of multiframe electrostatic potential (ESP) and total dipole fluctuations (TDF)

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract The InfiniCharges computer program, for generating reliable partial charges for molecular simulations in periodic systems, is here presented. This tool is an efficient implementation of the recently developed DM-REPEAT method, where the stability of the resulting charges, over a large set of fitting regions, is obtained through the simultaneous fit of multiple electrostatic potential (ESP) configurations together with the total dipole fluctuations (TDF). Besides DM-REPEAT, the program can als... Title of program: InfiniCharges Catalogue Id: AEYJ_v1_0 Nature of problem Generation of partial charges for classical simulations of periodic systems. Versions of this program held in the CPC repository in Mendeley Data AEYJ_v1_0; InfiniCharges; 10.1016/j.cpc.2015.10.005
DOI: 10.17632/xhk552kmnt
title: Recording of Breast Milk Volume in Response to Multisensory Stimuli: A Case-Control Study

description: Breast milk is recognized as the optimal food for newborns, but various factors can limit its production in mothers. Premature births often result in separation between mother and child, which could negatively impact breast milk production in these mothers. In many countries, the lack of milk banks that can supplement nutrition when the mother is not available leads to the use of infant formulas, which have been shown to not be the ideal option compared to breast milk. The purpose of this study and the associated data set was to investigate the effect of multisensory stimuli on breast milk production in mothers of preterm infants. The goal is to provide solid evidence on how these stimuli can positively influence breast milk production in this specific context.
DOI: 10.17632/jw32dtbmw8
title: Genetic diversity, phylogeny and biogeography in the tadpole shrimp Triops granarius (Branchiopoda: Notostraca) in Qatar

description: 28S and 16S ribosomal gene sequences of Triops granarius s.l. in Qatar
DOI: 10.17632/d5s7h9sxrb
title: Nematodes and their bacterial prey improve phosphorus acquisition by wheat

description: Raw data, we use R software to process these data in our manuscript.
DOI: 10.17632/c5d3v8fd5r
title: Smartphone-Based Videoconferance Telehealth for patients with Crohn’s Disease

description: The purpose of this study is to determine feasibility and effectivity of smartphone-based real-time video visits.We prospectively randomised 139 patients either to traditional (FTF) or online clinic (OLC) in a tertiary university hospital.We measured patients satisfactions clinic metrics such as disease activity,visit outcomes ,socioeconomic parameters,and travel expencess.
DOI: 10.17632/yw3pdfyjsn
title: Late diagnosis of X-linked hyper-IgM syndrome presenting as community-acquired pseudomonas aeruginosa pneumonia-related septic shock

description: Pseudomonas aeruginosa (P. aeruginosa) is rarely seen in community-acquired infection, but attention should be paid for its high mortality and invasive progress. X-linked hyper-IgM syndrome (XHIGM; HIGM1; OMIM:308230) is one type of inborn errors of immunity (IEIs), characterized by markedly decreased serum IgG, IgA, and IgE levels and normal or elevated serum IgM levels. We report a patient who developed a particularly severe community-acquired P. aeruginosa pneumonia-related septic shock, and late diagnosis of XHIGM was made by genome sequencing. Fatal community-acquired infections in children, including previously healthy children, should be considered to search for underlying IEIs by exome/genome sequencing.
DOI: 10.17632/fv6xk9td7p
title: Data for: Concurrent carbon and nitrogen transfer between hemiparasite Santalum album and two N2-fixing hosts in a sandalwood plantation

description: Data include 13C and 15N natural abundances of three tested trees over a 14-day period of 13C and 15N labeling.
DOI: 10.17632/5hh7rwwttm
title: Structural definition of HLA class-II presented SARS-CoV-2 epitopes reveals a mechanism to escape pre-existing CD4+ T cell immunity. Chen et al. 2023

description: Raw data in relation to a manuscript published in Cell Reports entitled: "Structural definition of HLA class-II presented SARS-CoV-2 epitopes reveals a mechanism to escape pre-existing CD4+ T cell immunity" by Chen et al. 2023.
DOI: 10.17632/4j6ck4rwfb
title: Data for: Optimal Monetary Policy for a Pessimistic Central Bank

description: Data containing time series used to calibrate the model presented in the manuscript.
DOI: 10.17632/fp4d9dgk93
title: Sedimentary Xenoliths of the Mesozoic Nicoya Complex, Costa Rica – Data Record from the Playa Arbolito Forearc Basement Assemblage, Nicoya Peninsula

description: The dataset consists of ten individual research data files over the Cretaceous sedimentary xenolith field of Playa Arbolito, exposed on the western Nicoya Peninsula of Costa Rica (Fig. S1). The data record a unique assemblage of radiolarite, radiolarian chert, chert, siliceous tuffaceous mudstone, and glassy pyroclastic xenoliths hosted in basalt of the Mesozoic forearc basement succession (Fig. S2-S3), called the Nicoya Complex after Dengo (1962). 
The data were gathered during two different field research campaigns in February 2012 and March 2017. While the 2012 research centered on xenoliths and their host rocks found at Playa Arbolito (Fig. S1), the 2017 campaign dealt in addition with potential xenolith source-rock strata contained in Cretaceous sedimentary sections of the interior Peninsula and NE Gulf of Nicoya coast (e.g., Sardinal, Manzanillo sections) (Table S1). Further key data come from detailed micropaleontological, sedimentological, and volcanological rock examinations in outcrop and laboratory. The dataset includes furthermore a newly detailed examination of Schmidt-Effing’s (1979) and Gursky’s (1984) xenolith rock collections from this locality. They are described and illustrated with full color images in dataset DS1. Despite marine erosion of rock exposures, xenolith samplings in different years still show similar lithologies at Playa Arbolito. As Figure S8 records, boring activity of pholadid bivalves in the intertidal zone actually contributes to active bioerosion of basement exposures, including pyroclastic xenoliths.   
The micropaleontological data show the notable first record of a Turonian planktic foraminiferal assemblage in marine pyroclastic rock from Nicoya Complex led by the index species Helvetoglobotruncana helvetica (Bolli) (Fig. S5). This find dates Cretaceous highly differentiated explosive arc volcanism in Costa Rica, similarly to that recorded by pyroclastic layers of the nearby Albian to Campanian Loma Chumico Formation, a sedimentary forearc basin succession (Calvo and Bolz, 1994; Calvo, 1998).
The unique basalt-hosted xenolith assemblage including sedimentary tuffaceous lithologies, particularly highly differentiated biotite- and hornblende-bearing pyroclastic rocks, evidence bimodal volcanic activity linked to Cretaceous island arc volcanism on the western Caribbean Plate boundary. The variety of sedimentary xenolith lithologies also found in Mesozoic strata sections of Nicoya Peninsula and NE Gulf of Nicoya points out to xenolith formation caused by widespread and long-term (~140 to 70 Ma) intrusion of basalt throughout the Cretaceous deep-sea forearc basin succession. They also show that 90 Ma aged Tortugal komatiite lavas erupted coevally with explosive arc volcanism. These data contribute to understand the nature of igneous forearc basement rock exposed along the Pacific coast of southern Central America, and also provide a useful reference for future research in active forearc and arc settings.
DOI: 10.17632/y3b7hvpsfp
title: Data for: Multi-objective Optimization on Structural Parameters of Torsional Flow Heat Exchanger

description: The zip file contains project files, screenshots of research results, chart data, experimental data, simulation data, and grid independence verification data.
DOI: 10.17632/gw3j8j34bf
title: Data for Accessibility, usability, and security evaluation of Hungarian government websites - 2018

description: Accessibility, usability, and security evaluation of 25 Hungarian government websites in 2018 for publication titled "Accessibility, usability, and security evaluation of Hungarian government websites".
DOI: 10.17632/2z5z3nwgch
title: Microscopic inelastic form factors for heavy-ion reactions

description: Abstract Inelastic form factors for one-step reactions are computed with a microscopic force comprising both central and tensor forces for calculating cross sections of heavy-ion reactions. A second quantization formalism is applied and one-body transition densities between initial and final wave functions are exposed. Title of program: GARDEL Catalogue Id: ABJE_v1_0 Nature of problem Inelastic form factors for one-step reactions are computed with a microscopic force comprising both central and tensor forces for calculating cross sections of heavy-ion reactions. Versions of this program held in the CPC repository in Mendeley Data ABJE_v1_0; GARDEL; 10.1016/0010-4655(89)90078-7 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)