cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25504/fairsharing.93g1th
title: FAIRsharing record for: Porifera Ontology
title: PORO

description: This FAIRsharing record describes:  An ontology covering the anatomy of Porifera (sponges)
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.6ax9gn
title: FAIRsharing record for: Reproductive trait and phenotype ontology
title: REPO

description: This FAIRsharing record describes:  Ontology for livestock reproductive traits and phenotypes.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.d8a14w
title: FAIRsharing record for: Early Pregnancy Ontology
title: EPO

description: This FAIRsharing record describes:  The early pregnancy ontology contains the concepts to describe ectopic pregnancy ultrasound images, organized into several subsumption hierarchies for types of ectopic pregnancies and the signs, anatomical structures and technical elements of imaging associated with ectopic pregnancy. Also known as the Ectopic pregnancy ontology.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.azq2t6
title: FAIRsharing record for: Molecular Interaction Map
title: MIM

description: This FAIRsharing record describes:  A Molecular Interaction Map (MIM) is a diagram convention that is capable of unambiguous representation of networks containing multi-protein complexes, protein modifications, and enzymes that are substrates of other enzymes. This graphical representation makes it possible to view all of the many interactions in which a given molecule may be involved, and it can portray competing interactions, which are common in bioregulatory networks. In order to facilitate linkage to databases, each molecular species is represented only once in a diagram. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.5a608b
title: FAIRsharing record for: BD5
title: BD5

description: This FAIRsharing record describes:  BD5 is an open HDF5-based format for representing quantitative data of biological dynamics.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.r49beq
title: FAIRsharing record for: FAIR Metrics - Identifier Uniqueness
title: FM-F1A

description: This FAIRsharing record describes:  The FM-F1A Metric provides a measurement of whether or not there is a scheme to uniquely identify the digital resource. An identifier scheme is valid if and only if it is described in a repository that can register and present such identifier schemes (e.g. fairsharing.org). Information about the identifier scheme must be presented with a machine-readable document containing the FM1 attribute with the URL to where the scheme is described. see specification for implementation. This metric applies to part F1 of the FAIR Principles.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.sgk7s0
title: FAIRsharing record for: Ontology of Core Data Mining Entities
title: OntoDM-core

description: This FAIRsharing record describes:  OntoDM is a generic ontology for the domain of data mining. The ontology includes the information processing processes that occur in the domain of data mining, participants in the processes and their specifications. OntoDM is highly transferable and extendable due to its adherence to accepted standards, and compliance with existing ontology resources. The generality in scope allows wide number of applications of the ontology, such as semantic annotation of data mining scenarios, ontology based support for QSARs, etc.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.975659
title: FAIRsharing record for: PRIDE XML Format
title: PRIDE XML Format

description: This FAIRsharing record describes:  XML submission format for the PRIDE repository at the EBI.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.d8f1x9
title: FAIRsharing record for: Research Network and Patient Registry Inventory Ontology
title: RNPRIO

description: This FAIRsharing record describes:  Ontology for Inventories of Clinical Data Research Networks, Patient-Powered Research Networks, and Patient Registries
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.shm2f2
title: FAIRsharing record for: Radiology Lexicon
title: RadLex

description: This FAIRsharing record describes:  RadLex is a comprehensive lexicon—a unified language of radiology terms—for standardized indexing and retrieval of radiology information resources. With more than 68,000 terms, RadLex satisfies the needs of software developers, system vendors and radiology users by adopting the best features of existing terminology systems while producing new terms to fill critical gaps. RadLex also provides a comprehensive and technology-friendly replacement for the ACR Index for Radiological Diagnoses. It unifies and supplements other lexicons and standards, such as SNOMED-CT and DICOM. RadLex development has received support from both the National Institute of Biomedical Imaging and Bioengineering (NIBIB) and the cancer Biomedical Informatics Grid (caBIG) project.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.kkshob
title: FAIRsharing record for: clinical Genome Data Model
title: cGDM

description: This FAIRsharing record describes:  The clinical Genome Data Model (cGDM) is the meta data model for integration of NGS technology-based patient specific genomic information into existing information system, mainly electronic health record (EHR). The cGDM designed to enable the computational processing for support interactive clinical decision making.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.tuq8zj
title: FAIRsharing record for: FAIR Metrics - Identifier Persistence
title: FM-F1B

description: This FAIRsharing record describes:  The FM-F1B Metric provides information regarding whether or not there is a policy that describes what the provider will do in the event an identifier scheme becomes deprecated. The change to an identifier scheme will have widespread implications for resource lookup, linking, and data sharing. Providers of digital resources must ensure that they have a policy to manage changes in their identifier scheme, with a specific emphasis on maintaining/redirecting previously generated identifiers. This metric applies to part F1 of the FAIR Principles.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.z2cz7s
title: FAIRsharing record for: Molgula oculata Anatomy and Development Ontology
title: MOOCULADO

description: This FAIRsharing record describes:  The first ontology describing the anatomy and the development of Molgula oculata.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.80d8cg
title: FAIRsharing record for: An ontology for experimental actions
title: EXACT

description: This FAIRsharing record describes:  EXACT aims to explicitly define the semantics of experimental protocols in order to ensure their reproducibility, and to support computer applications that assist biologists in the preparation, maintenance, submission and sharing of experimental protocols.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.aef0q5
title: FAIRsharing record for: Cognitive Atlas
title: CogAt

description: This FAIRsharing record describes:  The Cognitive Atlas is a collaborative knowledge building project that aims to develop a knowledge base (or ontology) that characterizes the state of current thought in cognitive science. Cognitive neuroscience aims to map mental processes onto brain function, which begs the question of what "mental processes" exist and how they relate to the tasks that are used to manipulate and measure them.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.bst9e4
title: FAIRsharing record for: Traditional Medicine Constitution Value Set
title: TM-CONST

description: This FAIRsharing record describes:  The value set for the Constitution property of the International Classification of Traditional Medicine (ICTM). The World Health Organization, in consultation with a large group of stakeholders in the areas of Traditional Medicine or Complementary and Alternative Medicine and Health Information Systems, has developed a collaborative project plan to produce an international standard terminology and classification system for Traditional Medicine. This resource is part of an effort to produce an international standard for information on TM that is ready for electronic health records and that will serve as a standard for scientific comparability and communication.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.1h49c6
title: FAIRsharing record for: Sleep Domain Units Ontology
title: UNITSONT

description: This FAIRsharing record describes:  An ontology for the units of measurement developed during the development of the Sleep Domain Ontology (SDO). It supports the use of SDO within the PhysioMIMI application. No official homepage for this resource can be found.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.5dvejq
title: FAIRsharing record for: Traditional Medicine Other Factors Value Set
title: TM-OTHER-FACTORS

description: This FAIRsharing record describes:  The value set for the Other Factors property of the International Classification of Traditional Medicine (ICTM). The World Health Organization, in consultation with a large group of stakeholders in the areas of Traditional Medicine or Complementary and Alternative Medicine and Health Information Systems, has developed a collaborative project plan to produce an international standard terminology and classification system for Traditional Medicine. This resource is part of an effort to produce an international standard for information on TM that is ready for electronic health records and that will serve as a standard for scientific comparability and communication.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.n3rt95
title: FAIRsharing record for: HMMER Profile File Format
title: null

description: This FAIRsharing record describes:  The profile hidden Markov Model (HMM) calculated from multiple sequence alignment data in this service is stored in Profile HMM save format (usually with ".hmm" extension). It is an ASCII file containing a lot of header and descriptive records followed by large numerical matrix which holds a probabilistic model of the motif. The file of this format is useful to search against sequence databases to find other proteins which share the same motif.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.30vmv9
title: FAIRsharing record for: BioSignalML Ontology
title: null

description: This FAIRsharing record describes:  An ontology for working with biosignals. This ontology defines concepts to describe the storage and exchange of biosignals, regardless of their underlying data format, and provides terms for common biosignal metadata.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.5bbab9
title: FAIRsharing record for: JavaScript Object Notation
title: JSON

description: This FAIRsharing record describes:  JavaScript Object Notation (JSON) is a lightweight, text-based, language-independent data interchange format. It was derived from the ECMAScript Programming Language Standard. JSON defines a small set of formatting rules for the portable representation of structured data. This RFC specification aims to remove inconsistencies with other specifications of JSON, repair specification errors, and offer experience-based interoperability guidance.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.s63y3p
title: FAIRsharing record for: SMART Protocols
title: SP

description: This FAIRsharing record describes:  The SeMAntic RepresenTation for Protocols, SMART Protocols, provides a structured OWL vocabulary of experimental protocols. SMART Protocols ontology includes two modules, SP-document and SP-workflow. SP-document, aims to provide a structured vocabulary of concepts to represent information necessary and sufficient for reporting an experimental protocol. SP-Workflow represents: i) the executable elements of a protocol, protocol instructions; ii) the experimental actions and material entities that participates in instructions (sample/specimen, organisms, reagents, instruments); and iii) the order of execution of the instructions.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.tn7et
title: FAIRsharing record for: FlyGlycoDB Ontology
title: null

description: This FAIRsharing record describes:  The glycobiology of Drosophila has been extensively studied in recent years, and much information has accumulated regarding glycan-related genes and proteins in Drosophila. The FlyGlycoDB ontology describes glycogenes of Drosophila and includes mutants, activity, references and links to FlyBase and UniProt. It is part of the FlyGlycoDB database.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.3pxg2f
title: FAIRsharing record for: Axt Alignment Format
title: null

description: This FAIRsharing record describes:  Axt Alignment files are produced from Blastz, an alignment tool available from Webb Miller's lab at Penn State University. The axtNet and axtChain alignments are produced by processing the alignment files with additional utilities written by Jim Kent at UCSC.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.haxp7g
title: FAIRsharing record for: Feature Annotation Location Description Ontology
title: FALDO

description: This FAIRsharing record describes:  The Feature Annotation Location Description Ontology (FALDO), to describe the positions of annotated features on linear and circular sequences for data resources represented in RDF and/or OWL. FALDO can be used to describe nucleotide features in sequence records, protein annotations, and glycan binding sites, among other features in coordinate systems of the aforementioned “omics” areas. Using the same data format to represent sequence positions that are independent of file formats allows us to integrate sequence data from multiple sources and data types.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.y4z3tx
title: FAIRsharing record for: Clinical Study Ontology
title: CSO

description: This FAIRsharing record describes:  Ontology to describe general clinical studies.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.15468/dl.6uq5vx
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "OccurrenceStatus is Present",
 "TaxonKey is Vaccinium vitis-idaea L.",
 "Year is 1882"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020617-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25504/fairsharing.cea9zc
title: FAIRsharing record for: Statistical Data and Metadata eXchange
title: SDMX

description: This FAIRsharing record describes:  Statistical Data and Metadata eXchange (SDMX) is an initiative to foster standards for the exchange of statistical information. The SDMX initiative sets standards to facilitate the exchange of statistical data and metadata using modern information technology. Several versions of the technical specifications have been released since 2004. SDMX has also been published as an ISO International Standard (IS 17369).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.np2wfz
title: FAIRsharing record for: Zebrafish Experimental Conditions Ontology
title: ZECO

description: This FAIRsharing record describes:  This ontology is designed to represent the experimental conditions applied to zebrafish and has been developed to facilitate experiment condition annotation at ZFIN.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.