cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.16794691
title: Global Fire Emissions Database version 5 (GFED5)

description: Data and code accompanying the publication "Landscape fire emissions from the 5th version of the Global Fire Emissions Database (GFED5)" published in Scientific Data.

Updates for recent years as well as ancillary data can be retrieved (sftp) via https://www.globalfiredata.org. This repository contains the following files:



GFED5.1_monthly.zip contains monthly burned area and trace gas emissions (1997-2022)

GFED5.1_daily.zip contains daily trace gas emissions (1997-2022)

GFED5.1_ecosystem.zip contains monthly burned area and carbon emissions, including a breakdown in categories (2002-2022)

GFED5.1_code.zip contain Python scripts used to construct the netcdf files, figures, and tables in the publication above
DOI: 10.6084/m9.figshare.29695430
title: A comparative analysis of transposable element diversity and evolution across 75 bee genomes

description: This readme.txt file was generated on 2025-AUG-06 by Hannah Cook<br>This repository contains files associated with the research article:A comparative analysis of transposable element diversity and evolution across 75 bee genomesby Hannah L. Cook, John S. Sproul, Elizabeth A. Murray, and Silas BossertFor questions and/or concerns please contact the lead author of the paper under hannah.cook1 [at] wsu.eduThis repository consists of 3 files.###1. 01_EarlGrey_RepeatSummary.csv###This spreadsheet contains a repeat quantification table from Earl Grey outputs for the genome assemblies of each species. The file is the same as the one provided on the website of the journal.###2. 02_EarlGrey_SummaryFiles.zip###This archive contains Earl Grey's summary files for each of the 81 genome assemblies. Summary files consist of high-level and family-level TE quantification tables, a pie chart of genome repeat content, TE annotations in GFF3 and BED format, repeat landscape plots, and a de novo repeat library in fasta format. Raw data outputs can be made available upon request.###3. 03_Rmod_Rmask_SummaryFiles.zip###This archive contains summary files from the RepeatModeler2 and RepeatMasker pipeline for each of the 81 genome assemblies. The methods used for this pipeline are specified in Rmod_Rmask_methods.pdf. Summary files consist of repeat quantification .tbl outputs from the two rounds of RepeatMasker and a de novo library in fasta format.
DOI: 10.6084/m9.figshare.29695430.v1
title: A comparative analysis of transposable element diversity and evolution across 75 bee genomes

description: This readme.txt file was generated on 2025-AUG-06 by Hannah Cook<br>This repository contains files associated with the research article:A comparative analysis of transposable element diversity and evolution across 75 bee genomesby Hannah L. Cook, John S. Sproul, Elizabeth A. Murray, and Silas BossertFor questions and/or concerns please contact the lead author of the paper under hannah.cook1 [at] wsu.eduThis repository consists of 3 files.###1. 01_EarlGrey_RepeatSummary.csv###This spreadsheet contains a repeat quantification table from Earl Grey outputs for the genome assemblies of each species. The file is the same as the one provided on the website of the journal.###2. 02_EarlGrey_SummaryFiles.zip###This archive contains Earl Grey's summary files for each of the 81 genome assemblies. Summary files consist of high-level and family-level TE quantification tables, a pie chart of genome repeat content, TE annotations in GFF3 and BED format, repeat landscape plots, and a de novo repeat library in fasta format. Raw data outputs can be made available upon request.###3. 03_Rmod_Rmask_SummaryFiles.zip###This archive contains summary files from the RepeatModeler2 and RepeatMasker pipeline for each of the 81 genome assemblies. The methods used for this pipeline are specified in Rmod_Rmask_methods.pdf. Summary files consist of repeat quantification .tbl outputs from the two rounds of RepeatMasker and a de novo library in fasta format.
DOI: 10.26023/6ttp-wh8r-dc08
title: UAH MIPS Microwave Profiling Radiometer Data. Version 1.0

description: This dataset contains University of Alabama - Huntsville Mobile Integrated Profiling System (UAH MIPS) Microwave Profiling Radiometer (MPR) Data including atmospheric profiles of temperature, water vapor, relative humidity, and cloud liquid at 1 minute intervals. These data were collected from 5 December 2013 through 28 January 2014 as part of the Ontario Winter Lake-effect Systems (OWLeS) project.
DOI: 10.15468/dl.4mamew
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Bees (Hymenoptera : Apoidea) of Far Northern Ontario and Akimiski Island, Nunavut",
 "Geometry POLYGON((-88.27911 51.22323,-82.56309 51.22323,-82.56309 53.50866,-88.27911 53.50866,-88.27911 51.22323))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 23 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036953-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f9qznn
title: Occurrence Download

description: A dataset containing 662 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cychrus italicus"
 ]
}

 The dataset includes 662 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036954-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/e60x-0seh-tt0q
title: Micro Rain Radar Post Processed Data. Version 1.0

description: This dataset includes vertical profiles from two Micro Rain Radars (MRRs) belonging to the University of Utah and two MRRs belonging to SUNY Albany that were deployed for the Ontario Winter Lake-effect Systems (OWLeS) project in a transect beginning on the shore of Lake Ontario and extending to the upper reaches of the Tug Hill Plateau. The sites were Sandy Island Beach State Park (43.630N, 76.196W, 83 m MSL), Sandy Creek Central School (43.647N, 76.076W, 162 m MSL), a private residence (43.626N, 75.880W, 385 m MSL) north of the village of Redfield (hereafter North Redfield), and a private residence (43.733N, 75.717W, 543m MSL) near Sears Pond on the upper plateau (hereafter Upper Plateau). An Inter-Comparison was performed from 25-28 January 2014. This dataset contains the post processed data.
DOI: 10.15468/dl.tz46hh
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Orthoperus aequalis",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036957-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/4zqt-p33d-4j0h
title: ADWICE Icing Forecasts by DWD. Version 1.0

description: This dataset contains hourly icing intensity and scenario forecasts by DWD's model "Advanced Diagnosis and Warning System for aircraft ICing Environments" (ADWICE) during the ICICLE (In-Cloud ICing and Large-drop Experiment) field campaign from 26 January - 8 March 2019.
DOI: 10.15468/dl.wqzam3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Orthoperus aequalis",
 "Country is Croatia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036956-250920141307145/datasets/export for details.
DOI: 10.15468/dl.5hpehj
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Fauna silvestre rescatada por Cormacarena y evaluada por la Universidad de los Llanos"
 ]
}

 The dataset includes 17 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036958-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17242168
title: Discoba protein sequences for protein structure predictions

description: Comprehensive database of Discoba protein sequences, gathered for the purpose of improving protein structure predictions of Discoba species (including Trypanosoma and Leishmania) by AlphaFold and RoseTTAFold. Originally gathered for use with: https://github.com/zephyris/discoba_alphafold
description: Remove erroneous "ndefined" following undefined (X) residues in sequences.
DOI: 10.5281/zenodo.5563073
title: Discoba protein sequences for protein structure predictions

description: Comprehensive database of Discoba protein sequences, gathered for the purpose of improving protein structure predictions of Discoba species (including Trypanosoma and Leishmania) by AlphaFold and RoseTTAFold. Originally gathered for use with: https://github.com/zephyris/discoba_alphafold
description: Remove erroneous "ndefined" following undefined (X) residues in sequences.
DOI: 10.26023/e34j-v5vc-xv07
title: UAH ARMOR Radar Data. Version 1.0

description: This data set contains the data from the University of Alabama-Huntsville ARMOR (Advanced Radar for Meteorological and Operational Research) dual-polarization C-band Doppler radar during periods of Verification of the Origins of Rotation in Tornadoes EXperiment-Southeast (VORTEX-SE) Meso18-19 operations. The radar was located at the Huntsville, Alabama airport. The data are in NEXRAD level 2 format.
DOI: 10.15468/dl.a9nedt
title: Occurrence Download

description: A dataset containing 1089 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Herbarium JACA. Instituto Pirenaico de Ecología-CSIC",
 "TaxonKey is one of (Ononis, Ononis pinnata)"
 ]
}

 The dataset includes 1089 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036961-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.24987r
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dactylotrypes longicollis",
 "Country is Croatia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036959-250920141307145/datasets/export for details.
DOI: 10.15468/dl.wh5fma
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dactylotrypes longicollis",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036960-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p4ghj7
title: Occurrence Download

description: A dataset containing 10044 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ceiba pentandra",
 "HasCoordinate is true",
 "BasisOfRecord is Human Observation",
 "Continent is South America"
 ]
}

 The dataset includes 10044 records from 178 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036962-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hb2dsp
title: Occurrence Download

description: A dataset containing 51435 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "Geometry POLYGON((-3.46382 40.43557,-3.28687 40.43557,-3.28687 40.52785,-3.46382 40.52785,-3.46382 40.43557))",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 51435 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036880-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hkqq9b
title: Occurrence Download

description: A dataset containing 333327 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Magnoliopsida",
 "Geometry POLYGON ((-81.36653 -8.255789, -75.95939 -8.266088, -75.94925 -2.941308, -81.35639 -2.931009, -81.36653 -8.255789))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 333327 records from 236 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036829-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4uh8yc
title: Occurrence Download

description: A dataset containing 109 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anubias afzelii Schott"
 ]
}

 The dataset includes 109 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023074-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y7ksuy
title: Occurrence Download

description: A dataset containing 216 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anubias heterophylla Engl."
 ]
}

 The dataset includes 216 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023075-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mj467a
title: Occurrence Download

description: A dataset listing the 62 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((14.20671 48.58702,14.199 48.58243,14.1972 48.57953,14.20028 48.57545,14.21005 48.5729,14.21854 48.57154,14.22445 48.57154,14.22934 48.57171,14.23345 48.57256,14.23705 48.57579,14.23705 48.5797,14.23422 48.58209,14.22342 48.58413,14.21905 48.58532,14.21031 48.58787,14.20671 48.58702))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 62 records were derived from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023064-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nadsrk
title: Occurrence Download

description: A dataset containing 880 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anubias barteri Schott"
 ]
}

 The dataset includes 880 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023076-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nmty2k
title: Occurrence Download

description: A dataset containing 391 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Strychnos angustiflora Benth."
 ]
}

 The dataset includes 391 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023077-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27861078
title: Supplementary Material for: Pediatric aleukemic leukemia cutis with testicular involvement: a case report

description: Aleukemic leukemia cutis (ALC) is a rare condition and concerns less than 10% of leukemia cutis (LC) cases. LC defined as a cutaneous infiltration of neoplastic myeloid or lymphoid blasts, which occurs in the absence of any prior bone marrow or peripheral blood involvement. A pediatric case of ALC is presented because of an exceptional testicular localization as well as a review of the literature.
DOI: 10.6084/m9.figshare.27861078.v1
title: Supplementary Material for: Pediatric aleukemic leukemia cutis with testicular involvement: a case report

description: Aleukemic leukemia cutis (ALC) is a rare condition and concerns less than 10% of leukemia cutis (LC) cases. LC defined as a cutaneous infiltration of neoplastic myeloid or lymphoid blasts, which occurs in the absence of any prior bone marrow or peripheral blood involvement. A pediatric case of ALC is presented because of an exceptional testicular localization as well as a review of the literature.
DOI: 10.15468/dl.9vm94v
title: Occurrence Download

description: A dataset containing 1050 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lasimorpha senegalensis Schott"
 ]
}

 The dataset includes 1050 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023079-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wdueke
title: Occurrence Download

description: A dataset containing 13536 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pissodes E.F.Germar, 1817"
 ]
}

 The dataset includes 13536 records from 339 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023078-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/1d711dde-3128-4b14-9a18-444e195361d6
title: Simulation data underlying the publication: Time of first contact determines cooperator success in a cross-feeding consortium

description: Data from individual-based simulations interacting spherocylindrical particles growing and dividing on a surface. We simulate a cross-feeding consortium of two cooperating species and a cheater species. We look at how the parameters of the interaction and the initial placement of the particles influence the final make-up of the colony. Together with experimental data, these simulation data show that it is the time it takes for two cooperators to make contact for the first time that determines cooperator success.
DOI: 10.4121/1d711dde-3128-4b14-9a18-444e195361d6.v2
title: Simulation data underlying the publication: Time of first contact determines cooperator success in a cross-feeding consortium

description: Data from individual-based simulations interacting spherocylindrical particles growing and dividing on a surface. We simulate a cross-feeding consortium of two cooperating species and a cheater species. We look at how the parameters of the interaction and the initial placement of the particles influence the final make-up of the colony. Together with experimental data, these simulation data show that it is the time it takes for two cooperators to make contact for the first time that determines cooperator success.
DOI: 10.15468/dl.gx9737
title: Occurrence Download

description: A dataset containing 348 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Typhonodorum lindleyanum Schott"
 ]
}

 The dataset includes 348 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023081-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wz98bd
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Wolffia cylindracea Hegelm."
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023082-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9uc3nu
title: Occurrence Download

description: A dataset containing 100 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((78.35947 17.37634,78.38622 17.37634,78.38622 17.38861,78.37528 17.39895,78.35947 17.38861,78.35947 17.37634))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Odonata",
 "Year 2020-2024"
 ]
}

 The dataset includes 100 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023084-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.78fmzv
title: Occurrence Download

description: A dataset containing 3829 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Grylloprociphilus imbricator (Fitch, 1851)"
 ]
}

 The dataset includes 3829 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023083-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.khm8wt
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Wolffiella denticulata (Hegelm.) Hegelm."
 ]
}

 The dataset includes 19 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023086-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/a02c36b4-e689-4181-87d5-cd8ce3b75579
title: Replication dataset for “Migrating subaqueous dunes capture clay flocs”

description: This is the data underlying the publication <strong>“Migrating subaqueous dunes capture clay flocs”. </strong>It consists of the data as described in the publication, being the floc characteristis from the floc cam, grainsize distributions, bed profiles from the StreamPro, Kolmogorov calculations, the GoPro images from the experiments, and the lab sheet of the experiments. For more information I refer to the read-me file.<br>The abstract of the research in which this data is used reads:"Recent research highlights the abundance of floccule (flocs) in rivers, formed by the aggregation of clay particles with organic matter. These flocs affect the transport and eventual fate of clay. Flocs exhibit distinct behaviour from their unflocculated sedimentary counterparts: they can deform and break, and have higher settling velocities, which may in turn cause flocs to have the potential to deposit and possibly interact with the riverbed. Systematic experiments in a laboratory flume were conducted. Flocs showed a saltating (bouncing) behaviour, and were incorporated in the sediment bed as single flocs, clusters, or strings, via deposition and burial in the lee of a dune. The dune geometry was negligibly impacted by the presence of flocs. This study is the first to highlight interactions between flocs and bedforms. In natural systems, the burial of flocculated clay particles can affect contaminant spreading, aquatic ecology, the interpretation of deposition patterns, and clay transport."