cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/8d69mv2bmz
title: Spearman Rank-Order Correlation Heatmap of Prison Officer Career Guidance Needs Survey Responses

description: A Prison Officer Career Guidance Needs Survey was undertaken as part of the CCj4C Corrections Careers Erasmus+ KA3 Forward Looking Policy Project, funded by the European Union. The partnership consists of ministries of justice, prisons and adult education organisations from 6 European Member States and Turkey. As a precursor to this survey, the partership undertook an extensive literature and grey literature search, on prison and correctional officer/ public servant career guidance on a local, national and international level. The survey was developed collaboratively in the partnership based on this research. The aim of this survey was to hear directly from the service user (the prison officer) about their experience of career guidance and how the career development they receive impacts upon modern prison culture and more effective rehabilitation. The survey was delivered online via Google Forms and translated by native speakers. The survey was distributed in 5 countries: TR, IT, DE, RO and PT.  There were 749 responses in total.
DOI: 10.17632/f38d6s33wm
title: Research Data: "Remission of obesity and insulin resistance is not sufficient to restore mitochondrial homeostasis in visceral adipose tissue"

description: It includes the different subsets of experimental data corresponding to the original article "Remission of obesity and insulin resistance is not sufficient to restore mitochondrial homeostasis in visceral adipose tissue" as follows: Table1_Gene expression by rtPCR; normalized gene expression data in different tissues, and statistical test. Table2_Metabolomics data by NMR; normalized metabolite abundance in different tissues, and statistical test. Table3_Hi-Res Respirometry; normalized oxygen flux data and Flux Control Ratios for major respiratory states in different tissues, and statistical test. Table4_Gene expression by RNAseq; variance stabilizing transformed data as determined using DEseq2 for eWAT and Liver. Table5_GOBP-merged terms in the clusters of genes irreversibly decreased with HFD-feeding, from the first intervention and from the second intervention (eWAT). Table6_GOCC-merged terms in the clusters of genes irreversibly decreased with HFD-feeding, from the first intervention and from the second intervention (eWAT). Table 7_Cardiolipidomics by LC-MS/MS; total cardiolipin and monolysocardiolipin abundance, and relative monolysocardiolipin abundance in eWAT. Table8_Proteomics data by LC-MS/MS; Label-Free Quantification (LFQ) intensities for proteins quantified in eWAT. Table9; list of antibodies, TaqMan probes and substrates, uncouplers and inhibitors used, with their corresponding source and reference.
DOI: 10.17632/n7rnh94b53
title: MCC SEER Supplement

description: Drivers of Overall Mortality in Merkel Cell Carcinoma: A Population-Based Analysis
DOI: 10.17632/s3wd9p7nc6
title: Supplemental Material related to "Phase 2 randomized controlled trial of serlopitant, a neurokinin 1 receptor antagonist for chronic pruritus in epidermolysis bullosa. U Okata-Karigane et al., 2022" 

description: Supplemental Material related to "Phase 2 randomized controlled trial of serlopitant, a neurokinin 1 receptor antagonist for chronic pruritus in epidermolysis bullosa. U Okata-Karigane et al., 2022" 

Supplemental Figure S1. Participant flow in the double-blind phase and open-label extension study.
Supplemental  Figure S2. The change in the Static Participant Assessment of Itch (SPAI) at month 2.
Supplemental Figure S3. Monthly NRS change in the open-label extension study.
Supplemental Table S1. Detailed inclusion and exclusion criteria.
Supplemental Table S2. Detailed masking and blinding.    
Supplemental Table S3. A linear mixed model analysis for relative weekly NRS change.
Supplemental Table S4. Patient Global Impression of Change at month 2.
Supplemental Table S5. Minimal Clinically Important Difference (MCID) for the Average Itch NRS based on PGIC.
Supplemental Table S6. Changes in quality of life or pruritus-related questionnaires at month 2 from baseline.
Supplemental Table S7. Detailed open-label extension.
DOI: 10.17632/y6np2x9yvc
title: Multiple brain infarctions and endomyocarditis data of ANCA-negative eosinophilic granulomatosis with polyangiitis

description: Eosinophilic granulomatosis with polyangiitis (EGPA) is a small vessel necrotizing vasculitis characterized by asthma and eosinophilia. Ischemic stroke is a rare complication of the disease. We herein report a case involving a 77-year-old woman with sinusitis who developed embolic stroke and splenic infarctions. Laboratory tests revealed hypereosinophilia and elevated troponin-T and N-terminal pro-brain natriuretic peptide. Antineutrophil cytoplasmic antibodies (ANCA) studies were negative. Skin biopsy showed infiltration of eosinophils into the arterial walls. These clinicopathological findings led to the diagnosis of EGPA. We also found the evidence of endomyocarditis as revealed by multimodality cardiac imaging. The patient underwent continuous immunosuppressive and anticoagulation therapy, and the infarctions did not recur. This report highlights the importance of histologically proven vasculitis with eosinophil infiltration and careful examination for cardiac involvement, especially in ANCA-negative patients.
DOI: 10.17632/zbmchm3fz4
title: Unrestrained poly-ADP-ribosylation provides insights into chromatin regulation and human disease Prokhorova et al.

description: ARH3/ADPRHL2 and PARG are the primary enzymes reversing ADP-ribosylation in vertebrates, yet their functions in vivo remain unclear. ARH3 is the only hydrolase able to remove serine-linked mono(ADP-ribose) (MAR) but is much less efficient than PARG against poly(ADP-ribose) (PAR) chains in vitro. Here, by using ARH3-deficient cells, we demonstrate that endogenous MARylation persists on chromatin throughout the cell cycle, including mitosis, and is surprisingly well tolerated. Conversely, persistent PARylation is highly toxic and has distinct physiological effects, in particular on active transcription histone marks such as H3K9ac and H3K27ac. Furthermore, we reveal a synthetic lethal interaction between ARH3 and PARG and identify loss of ARH3 as a mechanism of PARP inhibitor resistance, both of which can be exploited in cancer therapy. Finally, we extend our findings to neurodegeneration, suggesting that patients with inherited ARH3 deficiency suffer from stress-induced pathogenic increase in PARylation that can be mitigated by PARP inhibition.
DOI: 10.17632/zmnfp7czhh
title: LINF_060014100

description: exosome-associated protein 3 | EAP3
Leishmania infantum (strain JPCM5)
DOI: 10.17632/5gzxp24s4z
title: Draft genome sequence data of Paenibacillus sp. Strain DA-C8：data analysis

description: This dataset shows the Ion Torrent System analysis for the Paenibacillus sp. strain DA-C8. The Paenibacillus sp. strain DA-C8 is a thermophilic, facultatively anaerobic, and xylanolytic bacterial strain that shows strong xylan-degradation ability compared with other xylanolytic Paenibacillus species. In this analysis, genomic DNA of Paenibacillus sp. strain DA-C8 was sequenced using the Ion GeneStudio S5 System technology, analyzed, and annotated using CLC Genomics Workbench 20.0.1 and DDBJ Fast Annotation and Submission Tool (DFAST).
DOI: 10.17632/6ygpz8562x
title: Biological Innocuousness of a Device Developed to Select the Optimum Spermatozoa to be used in the Treatment of Infertility

description: Neutral red uptake dataset Experiment number: experiment replicates Treatment: BLANK, culture medium for fibroblast growth incubated in a polyropilene tube suitable for cell culture MEM, culture medium for fibroblast growth HTF, culture medium for sperm incubation MEM (SSA), culture medium for fibroblast growth pre incubated for 24 hs with the SSA acrylic device HTF (SSA), culture medium for sperm incubation pre incubated for 24 hs with the SSA acrylic device; HTF (SSA+P), culture medium for sperm incubation with 10pM of progesterone pre incubated for 24 hs with the SSA acrylic device) Dilution (Treatment:PBS), indicates the proportion of the mix made with the treatment solution and PBS solution. Cells incubation time (hs), time at which the cells viability was evaluated. Absorbance, the mean value of 3 replicates of the same treatment given by the microplate reader on each experiment. Cell viability (%), is the percentage of viability calculated by dividing the absorbance of the treatment solution (minus the absorbance of PBS (treatment:PBS = 0:100)) by the absorbance of the blank solution (minus the absorbance of PBS) per 100. MTT assay dataset Experiment number: experiment replicates Treatment: BLANK, culture medium for fibroblast growth incubated in a polyropilene tube suitable for cell culture MEM, culture medium for fibroblast growth HTF, culture medium for sperm incubation MEM (SSA), culture medium for fibroblast growth pre incubated for 24 hs with the SSA acrylic device HTF (SSA), culture medium for sperm incubation pre incubated for 24 hs with the SSA acrylic device; HTF (SSA+P), culture medium for sperm incubation with 10pM of progesterone pre incubated for 24 hs with the SSA acrylic device) Dilution (Treatment:PBS), indicates the proportion of the mix made with the tratmente solution and PBS solution. Cells incubation time (hs), time at which the cells viability was evaluated. Absorbance, the mean OD value of 3 replicates of the same treatment given by the microplate reader on each experiment. Cell viability (%), is the percentage of viability calculated by dividing the absorbance of the treatment solution (minus the absorbance of PBS (treatment:PBS = 0:100)) by the absorbance of the blank solution (minus the absorbance of PBS) per 100. Colony formation dataset Experiment number: experiment replicates Treatment: MEM, culture medium for fibroblast growth HTF, culture medium for sperm incubation MEM (SSA), culture medium for fibroblast growth pre incubated for 24 hs with the SSA acrylic device HTF (SSA), culture medium for sperm incubation pre incubated for 24 hs with the SSA acrylic device; HTF (SSA+P), culture medium for sperm incubation with 10pM of progesterone pre incubated for 24 hs with the SSA acrylic device); Cells incubation (days), time at which the cells colony number was evaluated. Number of colonies, evaluated under direct observation in the microscope
DOI: 10.17632/7tmrdf547z
title: Data for: Multiphase Late Devonian to Early Carboniferous volcanic rocks in the west of the Oyu Tolgoi, southeastern Mongolia: New geochronological, geochemical, and isotopic constraints on post-collision extension

description: They are the database of the paper titled "Multiphase Late Devonian to Carboniferous volcanic events in the west of the Oyu Tolgoi, southeastern Mongolia: New geochronological, geochemical, and isotopic constraints on tectonic history"
DOI: 10.17632/9kfw4pbmw8
title: Model PDHFLVIKOR to supplier selection - Matlab

description: This is a product of my master's work "COMPARISON BETWEEN HESITANT FUZZY LINGUISTIC VIKOR METHODS IN THE CONTEXT OF SUPPLIER SELECTION, 2022" at the Postgraduate Program in Administration at Federal Technological University of Paraná. In my study, I performed the modeling and simulation on MATLAB based on the article WU, Z.; XU, J.; JIANG, X.; ZHONG, L. Two MAGDM models based on hesitant Fuzzy linguistic term sets with possibility distributions: VIKOR and TOPSIS. Information Sciences, v. 473, p. 101-120, 2019.
DOI: 10.17632/9kr3rf6gs2
title: An eco-innovative proposal to upcycle gillnets

description: Fishing gear life cycle begins in industries that manufacture these products from synthetic polymers persistent in the environment. The world trade distributes these materials around the planet and are introduced into the sea by the seafood supply chain that is plastic-dependent to catch fish. Abandoned, lost or otherwise discarded fishing gear (ALDFG) cause environmental and economic impacts, such as ghost fishing, habitat loss and biodiversity, in addition are sources of microplastics. Nowadays items related to fishing are among the top ten items responsible for marine litter. This study developed low-impact reverse engineering of gillnets removed in Marine Protected Areas (MPAs) of São Paulo State, Brazil.  First sale price of gillnet waste was estimated and the traceability of high added environmental value polyamide-6 (PA6, nylon) prototypes (upcycle) through the green technology approach and convolutional neural network tools.
Datasets of Bottom set gill net anchored”, classified as “GNS 07.1”. 
Where total weight (TW) in kg, total length (TL) (m), netting (webbing) height (HPA) (m), netting total length (TLPA) (m), mesh size (MESH)  (mm), monofilament diameter (DIAM) (mm),  material exhaustion percentage (EX) and the hanging ratio (E), where the hanging ratio was  determined by the quotient between the headline length and the netting length. Additionally, residue weight, such as sand and debris (RES).  
Raw = 280 instances; Measured = 134 instances and Reverse = 36 instances

Residual silte particle datasets embedded in PA6 upcycle from illegal and ghost gillnet
From 15 recycled PA6 badge holder prototypes were captured 45 random images through digital microscope and processing in ImageJ software. 
Particle_Summary_Anova is a ImageJ analysis summary of particle features for each image.
Particles_Bin has 3041 instances of silt particles features,  with 2626 instances (TRUE) and 415 instances (FALSE)
DOI: 10.17632/b2mx7hx83x
title: LINF_360043900

description: polyubiquitin
Leishmania infantum (strain JPCM5)
DOI: 10.17632/b4thcmbvy3
title: 1DE-MS profiling of rat cerebral cortex proteins of focal cerebral ischemia-reperfusion injury by combining SDS-PAGE, gel slicing, quantitative LC-MS/MS and profile reconstruction

description: A rat model of focal cerebral ischemia-reperfusion (I/R) injury was established by 2 hour-middle cerebral artery occlusion (MCAO) followed with 1, 7 and 14 days of reperfusion.  Validation of the model was done by the measurement on cerebral blood flow, infarct volume, histological damage and neurological functions.  The rat cerebral cortex proteins from the six animal groups (sham and I/R; 1D, 7D and 14D; 4 rats per group) were analyzed with an approach we termed as "1DE-MS profiling", by combining SDS-PAGE, gel slicing, quantitative LC-MS/MS and profile reconstruction.  The samples were separated by gradient SDS-PAGE and each lane of the samples was cut into a set of 35 equal-sized (1.1 mm × 1.1 mm) square pieces.  All the gel pieces were analyzed with standardized procedures of in-gel digestion and LC-MS/MS.  A total of 5943 proteins (37 keratins included) were detected and the MS-detected abundance data were used to reconstruct the gel distributions in the six groups for all the proteins.  All the 1DE-MS profiles were deposited in this dataset.  The proteins were numbered alphabetically by their UniProtKB entry names, from #1 to #5943, as listed in "list of the 5943 proteins.xlsx".  The data and the 1DE-MS profiles in two plot formats (color density and histogram) were provided in the six Excel files, each protein in a separate worksheet with the name "# protein -UniProtKB entry name" (e.g., 1536 -ALDOC_RAT).  
This dataset contains a significant amount of information of high complexity, which was presented visually by the 1DE-MS profiles.  The observations included, 1) several hundreds of proteins were co-detected at any position in the gels, 2) about one-third of the proteins were detected at more than one positions or with broad distributions in the gels, 3) about one-fourth of the proteins were detected in the gels at the positions with the abundance-peak apparent molecular masses (Mws) obviously different from their calculated Mws, 4) the changes of a protein caused by different physiological or pathological conditions were not just about the total quantity, but of its structural information-rich profile.  Examination of some of the profiles revealed the formation of the detected protein forms, often termed as "proteoforms" in recent years, involved alternative splicing, proteolytic processing, PTMs such as glycosylation, phosphorylation and ubiquitination, and degradation or fragmentation.  We think this dataset would provide useful information for rat brain protein analysis and the method of 1DE-MS profiling would provide an option for proteomic analysis, from the view of proteoforms that concerns protein structures.
DOI: 10.17632/bcwxgx89gk
title: Spatial records of the endemic vascular plants from Brazil

description: Occurrences of plant species endemics from Brazil, according to the checklist of the Brazilian Flora 2020 Project (version 393.296), obtained from GBIF and SpeciesLink.
DOI: 10.17632/cthy7rd4n2
title: Tradable Performance Standards in the Transportation Sector

description: Figure data Sonia Yeh, Dallas Burtraw, Thomas Sterner, David Greene, Tradable performance standards in the transportation sector, Energy Economics, 2021, 105490, ISSN 0140-9883, https://doi.org/10.1016/j.eneco.2021.105490. (https://www.sciencedirect.com/science/article/pii/S0140988321003765) Abstract: Performance standards have a long history in environmental policy. A performance standard sets a standard of technology performance but leaves technology choice to producers; it increases the relative costs of technologies with undesirable performance characteristics and lowers the costs of technologies with desirable characteristics. The primary motivations are to promote innovation, to address consumers' undervaluation of efficiency, and to reduce externalities, such as air pollution and the risks of dependence on foreign oil. In the past decade, trading has been incorporated (thus termed as tradable performance standard, TPS) into several U.S. transportation programs: regulations for greenhouse gas emissions from passenger cars and trucks (national), zero-emission vehicle programs (10 states), the Renewable Fuel Standard (national), and low-carbon fuel standards (two states). TPS allows for equalization of marginal costs across eligible technologies and is therefore more efficient than pure regulations. We show that sectoral TPS programs have high credit prices but low price effects on products and provide strong incentives for upstream innovation and technology transformation. Unlike emissions pricing, however, they do not have a strong output effect: consumers do not bear the full cost of the pollution and do not have incentive to reduce consumption of polluting products. Given that the expected carbon price may be too low to substantially affect transportation demand or technology change, combining TPS with a carbon price may be necessary to drive innovation and achieve a sustained low-carbon transformation in the sector. Keywords: Policy instruments; Transportation; Performance-based standard; Innovation; Mitigation cost; Complementary policy
DOI: 10.17632/cw9hm3kbr9
title: Stillman_Icarus_2021

description: Supplemental Material for Stillman et al (2021) Icarus paper
DOI: 10.17632/fjv4kxnfzz
title: LINF_090018900

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/g2z6kgm2x6
title: Limonius (Pheletes) californicus

description: Within the framework of this work, the type material (two syntypes) of Cardiophorus californicus Mannerheim, 1843 was studied in detail; it was photographed. The author of the original description did not identify the holotype, which, in accordance with the provisions of the International Code of Zoological Nomenclature, entails the need to distinguish the lectotype and paralectotype for the subsequent supposed redescription of the species.
DOI: 10.17632/n5gvnc2dv3
title: LINF_360019700

description: Adenylate kinase; Leishmania infantum (strain JPCM5)
DOI: 10.17632/nmhz48ppsj
title: Data on Selection of Antifungal Bacteria for Inhibiting the Growth of Ganoderma Boninense and their antifungal metabolite compound

description: Data for the manuscript " Data on selection of antifungal bacteria for inhibiting the growth of Ganoderma Boninense and their antifungal metabolite compound"
DOI: 10.17632/z7kvbfmwnt
title: Supporting data for evalution of antihypertensive potential of angiosperm RuBisCO 

description: The dataset present here including the sources of RuBisCO sequences, detailed results of antihypertensive potential evalution,detailed results of docking analysis of these peptides on ACE protein, and their ADMET properties.
DOI: 10.17632/32r4tcxwkj
title: INHAT subunit SET/TAF-Iβ regulates PRC1 independent H2AK119 mono-ubiquitination via E3 ligase MIB1 in colon cancer

description: INHAT subunit SET/TAF-Iβ regulates PRC1 independent H2AK119 mono-ubiquitination via E3 ligase MIB1 in colon cancer
DOI: 10.17632/69zm32zvmn
title: Understanding the Host-Pathogen Evolutionary Balance through Gaussian Process Modelling of SARS-CoV-2. Loguercio et al. (2023)

description: Supplementary movies for the article "Understanding the Host-Pathogen Evolutionary Balance through Gaussian Process Modelling of SARS-CoV-2" by Loguercio et al., Cell Patterns (2023).
From the Results:
"To better dissect the differences in allele appearance over the time-span that contributes to the changing face of the spread and pathology, we generated comprehensive time-lapse GP-based SCV maps highlighting as a collective all current VOCs being monitored by the CDC for every day between 5/16/2021, to 8/22/2021 (Movie S1) as well as individual VOCs defining distinct Alpha, Beta, Gamma, and Delta lineages (Movies S2-S5)".
DOI: 10.17632/j249943jxp
title: Back Pain Study

description: Objectives: To examine the knowledge of LBP and physical activity for people with LBP among practitioners prescribing or delivering physical activity in the community. Methods: A cross-sectional survey was administered to physiotherapists and physical trainers involved in the delivery of exercise programs in Hamilton, Ontario. Results: A total of 14 (35.9%) physiotherapists and 25 (64.1%) physical trainers completed the survey. Both physiotherapists and trainers routinely assessed their client’s physical activity but used different tools to track physical activity. Both groups demonstrated high confidence in prescribing physical activity although there were differences in what each group constitutes physical activity for their patients. The results showed that trainers had more pessimistic beliefs about LBP compared to physiotherapists using the back beliefs questionnaire, T(34) = -3.81, p < 0.01 and a modified version of the Örebro Musculoskeletal Pain Questionnaire, T(33) = -3.04, p < 0.01. Conclusions: An educational program targeting those delivering physical activity programs in the community, which focuses on attitudes, beliefs, and recommendations for prescribing physical activity for patients with LBP could improve the uptake of physical activity in this patient group.
DOI: 10.17632/n3mb368cxk
title: Data about a Meta-analysis: Gamification and Behavior Intention

description: This dataset consists of:

Raw data for R analysis of primary articles;
R source code used for analysis in R language.
DOI: 10.17632/p3hg2strny
title: Date of“ Neuroprotective effect of acupuncture on ischemic stroke by activating AMPK/PGC-1α signaling”

description: Experimental original data, including animal weights and values for individual index determinations and information on materials required for the experiments.
DOI: 10.17632/yry2hb9bjc
title: Replicates for western blot analysis and PCR analysis of WT and Dars2 knockout cells

description: We performed western blot or PCR experiments to explore the mechanisms involved in regulation of hematopoietic stem cell maintenance by Dars2.
DOI: 10.17632/z2mfbfdzdc
title: Data for: Incentives for Information Provision: Energy Efficiency in the Spanish Rental Market

description: Data used in the article