cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25378/janelia.24262768.v1
title: Manual organelle segmentations (crop319) in near-isotropic, reconstructed volume electron microscopy (FIB-SEM) of mouse liver acinus (jrc_mus-liver-zon-1)

description: <b>This acquisition is part of the CellMap 2024 Segmentation Challenge</b><b>Challenge DOI:</b> https://doi.org/10.25378/janelia.c.7456966<b>Challenge Website:</b> https://cellmapchallenge.janelia.org/<b>Annotation description</b>: Dense segmentations of extracellular space, plasma membrane, mitochondrial membrane, mitochondrial lumen, vesicle membrane, endosome membrane, vesicle lumen, endoplasmic reticulum lumen, endoplasmic reticulum membrane, lipid droplet lumen, lipid droplet membrane, endosome lumen, cytosol, endosome, vesicle, lipid droplet, mitochondria, endoplasmic reticulum, cell, endoplasmic reticulum membrane collective in jrc_mus-liver-zon-1 using Amira 3D 2021.1, Classic Segmentation Workroom and the 'Using Amira to manually segment organelles in vEM for machine learning V.3' annotation protocol.<b>Annotation ID</b>: crop319<b>Primary Annotator</b>: Rebecca Vorimo<b>Annotation protocol</b>: Using Amira to manually segment organelles in vEM for machine learning V.3 (http://dx.doi.org/10.17504/protocols.io.bp2l61rb5vqe/v3)<b>Software</b>: Amira 3D 2021.1, Classic Segmentation Workroom<b>Annotated voxel size (nm)</b>: 4 x 4 x 4 (x, y, z)<b>Annotated data dimensions (µm)</b>: 1.6 x 1.6 x 1.6 (x, y, z)<b>Annotated data offset (nm)</b>: 16918 x 90982 x 201838 (x, y, z)<b>Classes annotated</b>: extracellular space, plasma membrane, mitochondrial membrane, mitochondrial lumen, vesicle membrane, endosome membrane, vesicle lumen, endoplasmic reticulum lumen, endoplasmic reticulum membrane, lipid droplet lumen, lipid droplet membrane, endosome lumen, cytosol, endosome, vesicle, lipid droplet, mitochondria, endoplasmic reticulum, cell, endoplasmic reticulum membrane collective<b>Dataset URL</b>: s3://janelia-cosem-datasets/jrc_mus-liver-zon-1/jrc_mus-liver-zon-1.zarr/recon-1/labels/groundtruth/crop319<b>Source (EM) dataset ID</b>: jrc_mus-liver-zon-1<b>Source (EM) voxel size (nm)</b>: 8 x 8 x 8 (x, y, z)<b>Source (EM) data dimensions (µm)</b>: 397.16 x 171.61 x 188.81 (x, y, z)<b>Source (EM) DOI</b>: https://doi.org/10.25378/janelia.24128700<b>Visualization website</b>: https://openorganelle.janelia.org/datasets/jrc_mus-liver-zon-1<b>Publication:</b> <i>CellMap Segmentation Challenge,</i> 2024.<b>The CellMap Project Team during this time consisted of:</b> David Ackerman, Davis Bennett, Marley Bryant, Hannah Nguyen, Grace Park, Alyson Petruncio, Alannah Post, Jacquelyn Price, Diana Ramirez, Jeff Rhoades, Rebecca Vorimo, Aubrey Weigel, Marwan Zouinkhi, Yurii Zubov.<b>The CellMap Project Team Steering Committee during this time consisted of:</b> Misha Ahrens, Christopher Beck, Teng-Leong Chew, Daniel Feliciano, Jan Funke, Harald Hess, Wyatt Korff, Jennifer Lippincott-Schwartz, Zhe J. Liu, Kayvon Pedram, Stephan Preibisch, Stephan Saalfeld, Ronald Vale, and Aubrey Weigel.
DOI: 10.6084/m9.figshare.c.3620258_d1.v1
title: Additional file 8: Table S4. of Differential gene network analysis for the identification of asthma-associated therapeutic targets in allergen-specific T-helper memory responses

description: Upregulated and differentially expressed genes in the HDM-sensitized atopics with asthma compared to HDM-nonsensitized controls. Differential network analysis of the responses in HDM-sensitized atopics with asthma versus HDM-nonsensitized controls identified genes with upregulated expression and coexpression (region 3, P = 0.0009) patterns in the asthmatic group. Genes identified were exclusively from the blue module (Fig. 6a). (XLS 32 kb)
DOI: 10.15468/dl.6qzh9w
title: Occurrence Download

description: A dataset containing 848 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Suillus tomentosus Singer, Snell & E.A.Dick"
 ]
}

 The dataset includes 848 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037948-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a46rd8
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-107.5019 22.00874,-104.70626 22.00874,-104.70626 25.90016,-107.5019 25.90016,-107.5019 22.00874))",
 "OccurrenceStatus is Present",
 "TaxonKey is Quercus glaucescens Bonpl."
 ]
}

 The dataset includes 7 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047228-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xznurh
title: Occurrence Download

description: A dataset containing 130399 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "TaxonKey is Fabaceae"
 ]
}

 The dataset includes 130399 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074427-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xsx5h3
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Criscia stricta (Spreng.) Katinas",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 50 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028093-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rcm5xp
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Shorea hemsleyana (King) King ex Foxw."
 ]
}

 The dataset includes 67 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150239-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rwey5v
title: Occurrence Download

description: A dataset containing 542058 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potamogeton L."
 ]
}

 The dataset includes 542058 records from 767 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028094-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ek7nzz
title: Occurrence Download

description: A dataset containing 752 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Moorochloa eruciformis (Sm.) Veldkamp)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 752 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047229-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.exqwut
title: Occurrence Download

description: A dataset containing 573 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eleocharis geniculata (L.) Roem. & Schult.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 573 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0175080-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uc2iff
title: Occurrence Download

description: A dataset containing 622 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tillandsia tricholepis Baker",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 622 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028090-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qwzmfa
title: Occurrence Download

description: A dataset containing 68187 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Noveloa coulteriana (Tul.) C.T.Philbrick, Noveloa longifolia (Novelo & C.T.Philbrick) C.T.Philbrick, Nuphar advena (Aiton) Aiton, Nuphar microphylla (Pers.) Fernald, Nuphar pumila (Timm) DC., Nuphar ×rubrodisca Morong, Nuphar sagittifolia (Walter) Pursh, Nuphar ×spenneriana Gaudin, Nuphar submersa Shiga & Kadono, Nuphar variegata Engelm. ex Durand, Nymphaea alba L., Nymphaea alexii S.W.L.Jacobs & Hellq., Nymphaea amazonum Mart. & Zucc., Nymphaea ampla (Salisb.) DC., Nymphaea atrans S.W.L.Jacobs, Nymphaea belophylla Trickett, Nymphaea candida J.Presl & C.Presl, Nymphaea carpentariae S.W.L.Jacobs & Hellq.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation, Material sample, Literature Occurrence, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950"
 ]
}

 The dataset includes 68187 records from 549 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0163411-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25927072
title: Instrumento de autoevaluación para la identificación de actitudes reflexivas esenciales en la docencia

description: Un cuestionario para valorar las actitudes reflexivas esenciales en la docencia, a partir de la propuesta de Dewey.
DOI: 10.15468/dl.mabwt3
title: Occurrence Download

description: A dataset containing 838 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Critonia morifolia (Mill.) R.M.King & H.Rob.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 838 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028096-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.82144/b74eb2ee
title: NEFSC Abundance of the Gulf of Maine and Bay of Fundy Harbor Porpoise Based on Aerial Surveys 1999

description: Original provider:
NOAA Northeast Fisheries Science Center (NEFSC)

Dataset credits:
NOAA Northeast Fisheries Science Center (NEFSC)

Abstract:
The 1994 Amendments to the Marine Mammal Protection Act (MMPA) mandates periodic assessments of all cetacean stocks in US waters. To fulfill this mandate for the Gulf of Maine/Bay of Fundy harbor porpoise stock, the National Marine Fisheries Service (NMFS) has conducted line transect abundance surveys during the summers of 1991, 1992, 1995, and 1999 and provided annual estimates of harbor porpoise by-catch from US sink gillnet fisheries. As well, incidental takes of bycatch in the Canadian sink gillnet and herring weir fisheries have also been documented.

Abundance estimates increased from 37,000 in 1991 to 74,000 in 1995 (Table 1A; Smith et al. 1993, Palka 1995a, Palka 1996a). By-catch in the US Northeast sink gillnet fishery decreased from 2,900 animals in 1990 to 332 in 1998 (Table 1B; Bravington and Bisack 1996; Bisack 1997; Rossman and
Merrick 1999). Harbor porpoise by-catch in the US mid-Atlantic coastal gillnet fisheries varied from a low of 103 in 1995 to a high of 572 in 1997 (Rossman and Merrick 1999). By-catch in the Canadian sink gillnet fishery decreased from 424 in 1993 to 10 in 1998 (Trippel et al. 1996, 1999).
By-catch in the Canadian herring weir fishery decreased from 33 observed takes in 1993 to 2 in 1998 (Waring et al. 1999). Study area, field procedures and analysis methods used in the 1999 abundance survey were similar to those used during previous surveys (Smith et al. 1993, Palka 1995a, Palka
1996a). This paper presents a description of the field procedures, analysis methods and results from the 1999 survey and compares the abundance estimates from 1991 to 1999.
DOI: 10.82144/0d49a0ac
title: NEFSC Twin Otter Aerial Survey 2008

description: Original provider:
NOAA Northeast Fisheries Science Center (NEFSC)

Dataset credits:
NOAA Northeast Fisheries Science Center (NEFSC)
DOI: 10.6084/m9.figshare.28645199
title: Genome-wide scan for runs of homozygosity identifies candidate genes in Sujiang pigs

description: The Sujiang pig is a synthetic breed that was derived from Chinese Jiangquhai pigs, Fengjing pigs and Western Duroc pigs. In this study, we estimated the genetic diversity and inbreeding level to shed insight into the continuous selection and improvement of Sujiang pigs.
DOI: 10.34740/kaggle/dsv/11135136
title: e-IPO Indonesia Data - Investment
DOI: 10.15468/dl.knxc3x
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lotus purshianus (Lindl.) Ottley)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 38 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022890-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ntjfsv
title: Occurrence Download

description: A dataset containing 11818 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lotus rectus L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 11818 records from 208 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022891-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cytteu
title: Occurrence Download

description: A dataset containing 72533 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nezara viridula (Linnaeus, 1758)"
 ]
}

 The dataset includes 72533 records from 641 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022887-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t6g4bc
title: Occurrence Download

description: A dataset containing 497 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lotus salsuginosus Greene)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 497 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022892-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xn6e9h
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is 500,000 plant Specimens from PE Herbarium in China from 1950 to 1999",
 "TaxonKey is Tetracentron sinense Oliv."
 ]
}

 The dataset includes 108 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022894-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mcr6e6
title: Occurrence Download

description: A dataset containing 157 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lotus suaveolens Pers.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 157 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022896-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28645223
title: COVID-19 (football).sav

description: The COVID-19 pandemic continues to have a noticeable negative impact in professional football. Numerous studies have shown the detrimental effect the infection has on athletes. However, comprehensive data on how COVID-19 has directly affected the performance of professional football players is still lacking. The aim of this study was to investigate the changes in performance of professional football players before and after an COVID-19 infection. The participants were 10 professional footballers from a team that played in the first division of the Slovenian football league, during the 2020/21 season. As soon as the players returned to first team training their performances levels were measured. We measured the following variables: total running distance covered, running distance covered in different speed categories, average heart rate and heart rate time in two different time zones. We combined the collected data for each player into weekly intervals. To determine the impact of SARS-CoV-2 on players’ performance, we compared the collected data before and after the COVID-19 infection.
DOI: 10.6084/m9.figshare.28645223.v1
title: COVID-19 (football).sav

description: The COVID-19 pandemic continues to have a noticeable negative impact in professional football. Numerous studies have shown the detrimental effect the infection has on athletes. However, comprehensive data on how COVID-19 has directly affected the performance of professional football players is still lacking. The aim of this study was to investigate the changes in performance of professional football players before and after an COVID-19 infection. The participants were 10 professional footballers from a team that played in the first division of the Slovenian football league, during the 2020/21 season. As soon as the players returned to first team training their performances levels were measured. We measured the following variables: total running distance covered, running distance covered in different speed categories, average heart rate and heart rate time in two different time zones. We combined the collected data for each player into weekly intervals. To determine the impact of SARS-CoV-2 on players’ performance, we compared the collected data before and after the COVID-19 infection.
DOI: 10.15468/dl.e5sut2
title: Occurrence Download

description: A dataset containing 14646659 records in GBIF matching the query:
SELECT catalognumber, scientificname, publishingorgkey, institutioncode, datasetkey, gbifid, decimallatitude, decimallongitude, 
 recordedby, identifiedby, eventdate, kingdomkey, phylumkey, classkey, orderkey, familykey, genuskey, subgenuskey, specieskey
 FROM occurrence WHERE
 kingdomkey = 6 AND phylumkey &lt;&gt; 7707728 
 AND taxonomicstatus = 'ACCEPTED' //newly added 12Feb2025
 AND hascoordinate = 1
 AND hasgeospatialissues = 0
 AND specieskey IS NOT NULL
 AND occurrencestatus = 'PRESENT'
 -- AND (
 -- basisofrecord = 'HUMAN_OBSERVATION'
 -- OR basisofrecord = 'MACHINE_OBSERVATION'
 -- OR basisofrecord = 'OCCURRENCE'
 -- OR basisofrecord = 'LIVING_SPECIMEN'
 -- OR basisofrecord = 'MATERIAL_SAMPLE'
 -- )
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE') AND datasetkey NOT IN ('040c5662-da76-4782-a48e-cdea1892d14c') 

 The dataset's 14646659 records were derived from 3481 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022889-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.an55ak
title: Occurrence Download

description: A dataset containing 570 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Blepharipa pratensis (Meigen, 1824)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 570 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003667-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.24396/ordar-178
title: Appendix for the article published in EPSL (2025) "The extraterrestrial dust accretion rate on Earth at Dome C, Antarctica: a fresh look with 3He by G. Fénisse, D.V. Bekaert, P.-H. Blard, J. Duprat, I. Mattia, M. Genge, M.D. Suttle, O. Barres, C. Engrand, Y. Marrocchi

description: Files used in this study:
A. Cosmic dust collection into ultra-clean snow at the Concordia station (Dome C, Antarctica) selected for this study at CRPG
B. Picture and conceptual image of extraction system
C. IR spectroscopy of macro-plastic contaminants
D. Table results giving the He isotopic compositions and total masses deduced by size range of cosmic dust extracted from the Concordia snow
E. Database of 3HeET fluxes
F. Database of noble gas compositions in IDPs/MMs available in literature
G. Neon three isotopes diagram
H. The impact of cosmic dust density on the He vs. mass relationship
I. The mass flux of terrestrial dust 4He terrigenous-bearing
DOI: 10.13145/bacdive116719.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive116719.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0108585.10fu
title: SH0108585.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive116720.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive116720.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.