cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.jx2bvp
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhynchosia salicifolia Hauman"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091656-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9zjhgu
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhamnus arnottiana Gardner ex Thwaites"
 ]
}

 The dataset includes 22 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091655-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d9mzhb
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus plavensis Dunkel"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091658-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qycqj4
title: Occurrence Download

description: A dataset containing 342 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pyrus xerophila T.T.Yu"
 ]
}

 The dataset includes 342 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091659-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gmkgyg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ageratina adenophora (Spreng.) R.M.King & H.Rob.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091660-240321170329656/datasets/export for details.
DOI: 10.15468/dl.ugtubs
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Andorra",
 "DatasetKey is Flora d'Andorra",
 "Geometry POLYGON((1.50643 42.57783,1.50557 42.57584,1.50798 42.56879,1.52833 42.56872,1.52792 42.58219,1.52294 42.58,1.50629 42.58036,1.50643 42.57783))",
 "HasGeospatialIssue is false",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 110 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091661-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zdf7u7
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron glaucophyllum Rehder"
 ]
}

 The dataset includes 108 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091662-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6wwjxb
title: Occurrence Download

description: A dataset containing 102 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhynchosia schimperi Hochst. ex Boiss."
 ]
}

 The dataset includes 102 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091663-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eyvbfd
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhamnus aurea Heppeler"
 ]
}

 The dataset includes 91 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091665-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ed9bnp
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus pleiophyllus Dunkel"
 ]
}

 The dataset includes 27 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091666-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qv6c2z
title: Occurrence Download

description: A dataset containing 1293 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argentina anserina (L.) Rydb.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1293 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091664-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6cxxsj
title: Occurrence Download

description: A dataset containing 128 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pyrus zangezura Maleev"
 ]
}

 The dataset includes 128 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091667-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dbfwb4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ageratina riparia (Regel) R.M.King & H.Rob.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091668-240321170329656/datasets/export for details.
DOI: 10.15468/dl.sdj4uj
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron glischroides Tagg & Forrest"
 ]
}

 The dataset includes 29 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091669-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mt5say
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhynchosia schlechteri Baker f."
 ]
}

 The dataset includes 38 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091670-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2mdnrh
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhamnus baldschuanica Grubov"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091671-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xf7p57
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pytinicarpa kaalaensis Lannuzel, Gâteblé & M.Pignal"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091674-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sumg36
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Agrimonia eupatoria L.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091673-240321170329656/datasets/export for details.
DOI: 10.15468/dl.s7fr6w
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus podocarpus W.T.Wang"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091672-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8vq6f8
title: Occurrence Download

description: A dataset containing 1008 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chrysojasminum floridum (Bunge) Banfi",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1008 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091675-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aybbc2
title: Occurrence Download

description: A dataset containing 197 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron glischrum Balf.fil. & W.W.Sm."
 ]
}

 The dataset includes 197 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091676-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3q5ham
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhynchosia scutulifolia Baker f."
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091677-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4qhx43
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Agropyron cristatum (L.) Gaertn.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091679-240321170329656/datasets/export for details.
DOI: 10.15468/dl.vszwha
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhamnus bodinieri H.Lév."
 ]
}

 The dataset includes 125 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091678-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rh4e7j
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pytinicarpa sarasinii (Däniker) G.L.Nesom"
 ]
}

 The dataset includes 22 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091680-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7es3ux
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus pohleanus Tzvelev"
 ]
}

 The dataset includes 12 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091681-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2kdmk8
title: Occurrence Download

description: A dataset containing 861999 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "TaxonKey is Bombus Latreille, 1802"
 ]
}

 The dataset includes 861999 records from 193 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091647-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rec9wg
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron gongshanense T.L.Ming"
 ]
}

 The dataset includes 25 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091683-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5bmghn
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Artemisia lagocephala (Fisch. ex Besser) DC.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 45 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091684-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.59hhr9
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Andorra",
 "DatasetKey is Flora d'Andorra",
 "Geometry POLYGON((1.50643 42.57783,1.50557 42.57584,1.50798 42.56879,1.52833 42.56872,1.52792 42.58219,1.52294 42.58,1.50629 42.58036,1.50643 42.57783))",
 "HasGeospatialIssue is false",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 110 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091685-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h4c2qq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Agropyron dasyanthum Ledeb.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091687-240321170329656/datasets/export for details.
DOI: 10.15468/dl.9hr97p
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhynchosia secunda (Thunb.) Eckl. & Zeyh."
 ]
}

 The dataset includes 24 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091686-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tabzsp
title: Occurrence Download

description: A dataset containing 326 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhamnus brachypoda C.Y.Wu"
 ]
}

 The dataset includes 326 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091688-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pjp2dn
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pytinicarpa tonitrui Lannuzel, Gâteblé & M.Pignal"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091689-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.32aea3
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus poldinii Dunkel"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091690-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aqtptz
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhododendron goodenoughii Sleumer"
 ]
}

 The dataset includes 19 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091691-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rwf7hm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salvia abrotanoides (Kar.) Sytsma",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091692-240321170329656/datasets/export for details.
DOI: 10.15468/dl.rfh2qa
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Agropyron desertorum (Fisch. ex Link) Schult.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091693-240321170329656/datasets/export for details.
DOI: 10.15468/dl.k2k57z
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhynchosia smithiana Moteetee & Boatwr."
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091694-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nbngv8
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhamnus bungeana J.J.Vassil."
 ]
}

 The dataset includes 166 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091695-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jpfsru
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quadribractea moluccana (Blume) Orchard"
 ]
}

 The dataset includes 19 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091696-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7udx4p
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ranunculus polii Franch. ex F.B.Forbes & Hemsl."
 ]
}

 The dataset includes 56 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091697-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6mp7bz
title: Occurrence Download

description: A dataset containing 64476 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Trifolium incarnatum L.)"
 ]
}

 The dataset includes 64476 records from 848 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091657-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10867804
title: Data for EBP-Nor workshop in 2024

description: This repository hosts data used for a workshop given by EBP-Nor (https://www.ebpnor.org/) in spring 2024. The workshop itself is hosted at GitHub (https://github.com/ebp-nor/workshop-2024). 

The PacBio reads were downloaded like this:



wget ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR654/000/ERR6548410/ERR6548410.fastq.gz


and subsampled like this:



seqtk sample ERR6548410.fastq.gz  420000 |gzip > ERR6548410_30x.fastq.gz

seqtk sample ERR6548410.fastq.gz  300000 |gzip > ERR6548410_22x.fastq.gz

seqtk sample ERR6548410.fastq.gz  360000 |gzip > ERR6548410_26x.fastq.gz


 

The Hi-C reads were downloaded like this:



wget ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6054981/ERR6054981_1.fastq.gz

wget ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR605/001/ERR6054981/ERR6054981_2.fastq.gz


and subsampled like this:



seqtk sample ERR6054981_1.fastq.gz 30000000 |gzip > ERR6054981_1_60x.fastq.gz

seqtk sample ERR6054981_2.fastq.gz 30000000 |gzip > ERR6054981_2_60x.fastq.gz

seqtk sample ERR6054981_1.fastq.gz 25000000 |gzip > ERR6054981_1_50x.fastq.gz

seqtk sample ERR6054981_2.fastq.gz 25000000 |gzip > ERR6054981_2_50x.fastq.gz