cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.b4pa2a
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Proteus vulgaris Hauser, 1885"
 ]
}

 The dataset includes 87 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010090-190813142620410/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngju99
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((11.44225 36.06861,18.46986 36.06861,18.46986 38.88111,11.44225 38.88111,11.44225 36.06861))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chara Linnaeus, 1753"
 ]
}

 The dataset includes 12 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072756-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rbeu7a
title: Occurrence Download

description: A dataset containing 304 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hypophthalmus marginatus Valenciennes, 1840"
 ]
}

 The dataset includes 304 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131536-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vw76hu
title: Occurrence Download

description: A dataset containing 822 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asplenium seelosii Leyb.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 822 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072731-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cm8cm9
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caligus epidemicus Hewitt, 1971"
 ]
}

 The dataset includes 25 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019744-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kseeep
title: Occurrence Download

description: A dataset containing 6666 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Attalea butyracea (Mutis ex L.f.) Wess.Boer"
 ]
}

 The dataset includes 6666 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0134914-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rvf9zz
title: Occurrence Download

description: A dataset containing 1302 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 10.5841610103368",
 "DecimalLongitude is less than 10.5872205635212",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 1302 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010406-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yhx0vz
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oreopanax ecuadoriensis Seem."
 ]
}

 The dataset includes 125 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019747-190621201848488/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kyjkb2
title: Occurrence Download

description: A dataset containing 18025858 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 18025858 records from 2137 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0144078-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tpbnff
title: Occurrence Download

description: A dataset containing 16792 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((4.109118660561522 43.5538997718163, 4.109118660561522 43.59016156647035, 4.034440962331202 43.59016156647035, 4.034440962331202 43.5538997718163, 4.109118660561522 43.5538997718163))",
 "EventDate is 2014-12-31,2024-12-31"
 ]
}

 The dataset includes 16792 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079988-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3me2z8
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lonicera japonica Thunb.",
 "Country is Seychelles",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079987-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dkpxag
title: Occurrence Download

description: A dataset containing 162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lonicera japonica Thunb.",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 162 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079989-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15771656
title: Merguellil basin dataset
DOI: 10.15468/dl.k84d3b
title: Occurrence Download

description: A dataset containing 2423 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lonicera japonica Thunb.",
 "Country is Switzerland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2423 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079992-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15771750
title: Raw datasets_manuscript: Lysogenic control of bacterial morphology and fitness by Spbetavirus phi3T

description: Raw data used to create the main and supplementary figures for the manuscript entitled Lysogenic control of bacterial morphology and fitness by Spbetavirus phi3T, by Floccari et al.Datasets supporting the various figures are divided into separate sheets, with each sheet titled according to the corresponding figure and panel.



Main Dataset: Data source_Floccari et al

This file contains data supporting the main figures, specifically:





Figure 1g_f: Measurements of cell length and width taken manually using ImageJ software, listed in columns.




Figure 3f: Measurements of spore length and width taken manually using ImageJ software, listed in columns.




Figure 4a_b: OD readings (measured using a Biotek Synergy H1 plate reader) used to generate growth curves, along with raw colony counts for CFU/mL calculations.




Figure 4d: OD, GFP, and mKate readings (from the Biotek Synergy H1 plate reader) used to generate competition assay graphs comparing WT and phi3T lysogen strains.




Figure 5: OD readings (measured using the Biotek Synergy H1 plate reader) used to determine the minimal inhibitory concentration (MIC) of antibiotics.




Figure 7d: OD, GFP, and mKate readings (from the Biotek Synergy H1 plate reader) used to create competition assay graphs comparing WT and double lysogen (DL) strains.





Supplementary Dataset: Supplementary_Data source_Floccari et al

This file contains data supporting supplementary figures, specifically:





Supplementary Figures a_b: raw colony counts for sporulation frequency calculations.




Supplementary Figures d_e: Fluorescence intensity measurements of sporulating cells taken in ImageJ, along with manual measurements of spore length and width using ImageJ, listed in columns.




Supplementary Figures 6_7: OD readings (from the Biotek Synergy H1 plate reader) used to generate growth curves.




Supplementary Figure 9: OD, GFP, and mKate readings (from the Biotek Synergy H1 plate reader) used to generate competition assay graphs comparing WT and SPβ lysogen strains.




Supplementary Figure 10a: OD readings (from the Biotek Synergy H1 plate reader) used to determine the MIC of ampicillin.




Supplementary Figure 10b: OD readings (from the Biotek Synergy H1 plate reader) used to determine the MIC of D-cycloserine.




Supplementary Figure 11: OD readings (from the Biotek Synergy H1 plate reader) used to determine the MIC of ampicillin.




Supplementary Figure 12: OD readings (from the Biotek Synergy H1 plate reader) used to determine the MIC of spectinomycin.




Supplementary Figure 15: OD readings (from the Biotek Synergy H1 plate reader) used to generate growth curves.
DOI: 10.5281/zenodo.15771751
title: Raw datasets_manuscript: Lysogenic control of bacterial morphology and fitness by Spbetavirus phi3T

description: Raw data used to create the main and supplementary figures for the manuscript entitled Lysogenic control of bacterial morphology and fitness by Spbetavirus phi3T, by Floccari et al.Datasets supporting the various figures are divided into separate sheets, with each sheet titled according to the corresponding figure and panel.



Main Dataset: Data source_Floccari et al

This file contains data supporting the main figures, specifically:





Figure 1g_f: Measurements of cell length and width taken manually using ImageJ software, listed in columns.




Figure 3f: Measurements of spore length and width taken manually using ImageJ software, listed in columns.




Figure 4a_b: OD readings (measured using a Biotek Synergy H1 plate reader) used to generate growth curves, along with raw colony counts for CFU/mL calculations.




Figure 4d: OD, GFP, and mKate readings (from the Biotek Synergy H1 plate reader) used to generate competition assay graphs comparing WT and phi3T lysogen strains.




Figure 5: OD readings (measured using the Biotek Synergy H1 plate reader) used to determine the minimal inhibitory concentration (MIC) of antibiotics.




Figure 7d: OD, GFP, and mKate readings (from the Biotek Synergy H1 plate reader) used to create competition assay graphs comparing WT and double lysogen (DL) strains.





Supplementary Dataset: Supplementary_Data source_Floccari et al

This file contains data supporting supplementary figures, specifically:





Supplementary Figures a_b: raw colony counts for sporulation frequency calculations.




Supplementary Figures d_e: Fluorescence intensity measurements of sporulating cells taken in ImageJ, along with manual measurements of spore length and width using ImageJ, listed in columns.




Supplementary Figures 6_7: OD readings (from the Biotek Synergy H1 plate reader) used to generate growth curves.




Supplementary Figure 9: OD, GFP, and mKate readings (from the Biotek Synergy H1 plate reader) used to generate competition assay graphs comparing WT and SPβ lysogen strains.




Supplementary Figure 10a: OD readings (from the Biotek Synergy H1 plate reader) used to determine the MIC of ampicillin.




Supplementary Figure 10b: OD readings (from the Biotek Synergy H1 plate reader) used to determine the MIC of D-cycloserine.




Supplementary Figure 11: OD readings (from the Biotek Synergy H1 plate reader) used to determine the MIC of ampicillin.




Supplementary Figure 12: OD readings (from the Biotek Synergy H1 plate reader) used to determine the MIC of spectinomycin.




Supplementary Figure 15: OD readings (from the Biotek Synergy H1 plate reader) used to generate growth curves.
DOI: 10.7910/dvn/ugqd6r
title: Subnational Democracy Index: Methodology and Technical Documentation

description: This document provides the complete methodological framework for the construction and application of the 'Subnational Democracy Index'. The Index offers a structured, interval-based technique for assessing the institutional characteristics of subnational political regimes in Ukraine at the level of oblast-status cities. Drawing on official and verifiable sources, the methodic operationalises key aspects of electoral and post-electoral processes through a set of seven component indices. These indices capture various institutional dimensions such as electoral competitiveness, voter turnout, succession control, term limitation, party system structure, ideological diversity, and inter-party confrontation.

The document outlines the logic of indicator aggregation, the coding procedures, the formalised conditions for assessment, and the interpretative model used to classify regime types along an autocracy–democracy spectrum. It also includes formulae for additive scoring, regime typologisation, and guidance on interpreting results in comparative temporal and territorial contexts. This technique serves as the analytical foundation for generating the data presented in the accompanying dataset.
DOI: 10.5281/zenodo.15115163
title: Glacial isostatic adjustment from satellite data in the Amundsen Sea Embayment, West Antarctica

description: This data provides an observations-based estimate of the present-day effects of glacial isostatic adjustment (GIA) in the Amundsen Sea Embayment, West Antarctica. The estimate was derived by combining satellite gravimetry and altimetry data with regional climate and firn modelling results. It is validated using data from global navigation satellite system (GNSS). The linked publication provides further detailed information on the data set.
DOI: 10.5281/zenodo.15115164
title: Glacial isostatic adjustment from satellite data in the Amundsen Sea Embayment, West Antarctica

description: This data provides an observations-based estimate of the present-day effects of glacial isostatic adjustment (GIA) in the Amundsen Sea Embayment, West Antarctica. The estimate was derived by combining satellite gravimetry and altimetry data with regional climate and firn modelling results. It is validated using data from global navigation satellite system (GNSS). The linked publication provides further detailed information on the data set.
DOI: 10.15468/dl.pndx3b
title: Occurrence Download

description: A dataset containing 20632 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((114.78334 1.75953,117.58308 3.01406,118.60813 4.23799,117.43009 4.60517,115.96137 4.51337,115.77779 4.23799,114.90573 3.13645,114.70685 2.2185,114.78334 1.75953))",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 20632 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079996-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k6ehw5
title: Occurrence Download

description: A dataset containing 41691 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lonicera japonica Thunb.",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 41691 records from 163 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079997-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rcxudv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lonicera japonica Thunb.",
 "Country is Zambia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079999-250525065834625/datasets/export for details.
DOI: 10.15468/dl.sxb683
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lonicera japonica Thunb.",
 "Country is Uruguay",
 "HasCoordinate is true"
 ]
}

 The dataset includes 92 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079998-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e194561v1-184102
title: Replication Data for: Staggered Difference-in-Differences in Gravity Settings: Revisiting the Effects of Trade Agreements

description: This deposit contains data and code for the article "Staggered Difference-in-Differences in Gravity Settings: Revisiting the Effects of Trade Agreements", in which we nest an extended two-way fixed effect (ETWFE) estimator for staggered difference-in-differences within the structural gravity model. To test the ETWFE, we estimate the effects of regional trade agreements (RTAs). The results suggest that RTA estimates in the current gravity literature may be biased downward (by more than 50% in our sample). Sensitivity analyses confirm the robustness of our main findings and demonstrate the applicability of our methods in different settings. We expect the ETWFE methods to have significant implications for the estimates of other policy variables in the trade literature and for gravity regressions on migration and FDI flows.
description: Bilateral goods trade flows between countries for which data is available. Smallest Geographic Unit: Country
DOI: 10.15468/dl.ugqze7
title: Occurrence Download

description: A dataset containing 168 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phlebotomus mascittii Grassi, 1908"
 ]
}

 The dataset includes 168 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080004-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9dg3n7
title: Occurrence Download

description: A dataset containing 9470 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plecoglossus altivelis altivelis"
 ]
}

 The dataset includes 9470 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080002-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/jcq9uy
title: PDB: 5DK3, Crystal Structure of Pembrolizumab, a full length IgG4 antibody random seed # 2(313K, 40°C, 500 ns)

description: 5DK3, Crystal Structure of Pembrolizumab, a full length IgG4 antibody (313K, 40°C, 100 ns), PDBs obtained every 50 ns.Random seed # 2
DOI: 10.15468/dl.fdrumd
title: Occurrence Download

description: A dataset containing 37663 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is one of (CHN.24_1, CHN.1_1, CHN.31_1, CHN.15_1)",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Aythya baeri (Radde, 1863), Pycnonotus sinensis (Gmelin, 1789), Syrmaticus ellioti (Swinhoe, 1872), Egretta garzetta (Linnaeus, 1766))"
 ]
}

 The dataset includes 37663 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080003-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gcjzqg
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phlebotomus major Annandale, 1910"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080006-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qq8dnm
title: Occurrence Download

description: A dataset containing 9765 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Podocarpus macrophyllus (Thunb.) Sweet"
 ]
}

 The dataset includes 9765 records from 243 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080005-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q634r7
title: Occurrence Download

description: A dataset containing 468 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sergentomyia dentata (Sinton, 1933)"
 ]
}

 The dataset includes 468 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080009-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sqn526
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Egypt, Libya)",
 "TaxonKey is Spalax ehrenbergi Nehring, 1898"
 ]
}

 The dataset includes 27 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080011-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ru4sxv
title: Occurrence Download

description: A dataset containing 430 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ixodida"
 ]
}

 The dataset includes 430 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080010-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sy6pse
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Aythya baeri (Radde, 1863)",
 "Year 1980-2025"
 ]
}

 The dataset's 1 records were derived from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079993-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.