cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.18739265.v1
title: mass-spec-data-JCS-259145.zip

description: Mass spectrometry raw data from Article: https://doi.org/10.1242/jcs.259145Abstract<i>Total PtdInsP declines in cells overexpressing PI4KIIIα</i>Mass spectrometry was used to measure levels of PtdIns<i>P</i>, PtdIns<i>P</i>2, and PtdIns<i>P</i>3. Human tsA-201 cells were transiently transfected with PI4KIIIα, EFR3B, and TTC7B (PI4KIIIα), PIP5KIγ, or Dishevelled 3 (Dvl3). In cell populations overexpressing PIP5KIγ, we found as expected that PtdIns<i>P</i>, the substrate of the 5-kinase, declined by 29% and PtdIns<i>P</i>2, the product, increased by 41% compared to control cells. However, we were surprised to find that overexpression of PI4KIIIα reduced the prevalence of its immediate product, PtdIns<i>P</i>, by 22% while still increasing PtdIns<i>P</i>2 by 29%. PIP5KIγ also increases the prevalence of PtdIns<i>P</i>3 by 54%.<i>Dvl3 decreases PtdInsP and increases PtdInsP2</i> <i>and PtdInsP3</i>We repeated these mass spectrometry measurements in cells overexpressing Dvl3 and found a 27% decrease in PtdIns<i>P</i>, a 21% increase in PtdIns<i>P</i>2, and a 66% increase in PtdIns<i>P</i>3.MethodsMass spectrometry was performed as previously described (de la Cruz et al., 2020). In brief, lipids were precipitated from pelleted cells treated with trichloroacetic acid and extracted with chloroform/methanol. Dried extracts were methylated with TMS-DM and quantified by targeted analysis as described (Traynor-Kaplan et al., 2017). For each phosphoinositide type, peaks were analyzed for the three most predominant species: 38:4, 36:2, and 36:1. Peak areas were converted to milligrams per 106 cells as described using 37:4 lipid internal standards and DNA-per-sample measurements.de la Cruz, L., A. Traynor-Kaplan, O. Vivas, B. Hille, and J.B. Jensen. 2020. Plasma membrane processes are differentially regulated by type I phosphatidylinositol phosphate 5-kinases and RASSF4. <i>J Cell Sci</i>. 133.Traynor-Kaplan, A., M. Kruse, E.J. Dickson, G. Dai, O. Vivas, H. Yu, D. Whittington, and B. Hille. 2017. Fatty-acyl chain profiles of cellular phosphoinositides. <i>Biochim Biophys Acta Mol Cell Biol Lipids</i>. 1862:513-522.Usage NotesMass spectrometry data was acquired from a Waters Xevo TQ-S. Data are organized in directories based on experimental day and each .raw folder contains the dataset for a single sample. Excel files within each directory describe the transfection conditions used for each sample: control (untransfected tsA-201 cells), PI4K (overexpressing PI4KIIIα, EFR3B, and TTC7B), PIP5K (overexpressing PIP5KIγ), or Dvl (overexpressing Dishevelled 3). The amounts of phosphoinositide standards are described as well.<br>
DOI: 10.34740/kaggle/dsv/3067247
title: Cryptocurrency extra data - Dogecoin
DOI: 10.5281/zenodo.5880761
title: untargeted metabolomics for IFN-γ treated BMECs, pos mode

description: all the metabolites identified by untargeted metabolomics for IFN-γ treated BMECs in positive ion mode
DOI: 10.5281/zenodo.5880760
title: untargeted metabolomics for IFN-γ treated BMECs, pos mode

description: all the metabolites identified by untargeted metabolomics for IFN-γ treated BMECs in positive ion mode
DOI: 10.5281/zenodo.5880787
title: untargeted metabolomics for IFN-γ treated BMECs, neg

description: all the metabolites identified by untargeted metabolomics for IFN-γ treated BMECs in negative ion mode
DOI: 10.5281/zenodo.5880786
title: untargeted metabolomics for IFN-γ treated BMECs, neg

description: all the metabolites identified by untargeted metabolomics for IFN-γ treated BMECs in negative ion mode
DOI: 10.6084/m9.figshare.17032088.v5
title: Hydrochemistry of groundwater of Indo-Gangetic Plain

description: The data set presented here include hydrochemistry and trace element analysis results of shallow groundwater and surface water collected from central part of the Indo-Gangetic Basin located in the industrial region of Kanpur and adjoining rural region. The data set is used to discern the dominant spatial variability, possible sources and factors controlling the occurrence, distribution and sources of radiotoxic element uranium in the densely populated region of central IGP.
DOI: 10.25345/c5h87k
title: MassIVE MSV000088703 - GNPS AgNP Capping Molecules from GLucidum and Lbicolor (Mushroom Species)
title: Characterization of Capping molecules of silver nanoparticles from Ganoderma lucidum and Laxitextum bicolor
DOI: 10.15151/esrf-es-651285554
title: Structural Biology at EMBL Grenoble, IBS-CIBB and IAB

description: The proposals covers a broad range of structural biology projects related to pathogen biology, host-pathogen interactions, RNA biology and structure-based drug development that are carried out by PIs at EMBL Grenoble, IBS-CIBB and IAB. The proposers have long-standing experience in the use, as well as the development of beam lines for macromolecular crystallography and have participated in successive BAG applications over the years, mostly at the ESRF but also at other synchrotrons (e.g. Soleil, Petra III, Diamond, SLS).
DOI: 10.6084/m9.figshare.18739523
title: Supplementary Material for: Female Reproductive Ageing and Chromosomal Abnormalities in a Large Series of Women Undergoing IVF

description: Chromosomal abnormalities are often detected in women with reproductive problems. This study aimed to investigate the presence and type of chromosomal aberrations in peripheral blood of women undergoing in vitro fertilization (IVF) and their possible association with advanced maternal age (AMA). A total of 1,837 women undergoing IVF between 2016 and 2019 were enrolled in the study. Women were further divided in AMA (≥35 years) and younger women (&lt;35 years). Chromosomal abnormalities were detected by peripheral blood karyotyping using standard cytogenetic techniques. Chromosomal abnormalities were detected in 13.5% of the enrolled women; 1.1% had autosomal abnormalities including reciprocal translocations, inversions, Robertsonian translocations, and a supernumerary marker chromosome, while 12.4% had X chromosome abnormalities. The frequency of chromosomal abnormalities was significantly higher in AMA women than in younger ones (17.4% vs. 3.9%, <i>p</i> &lt; 0.05). Women of AMA exhibited X chromosome mosaicism with a frequency of 16.1%, and mosaic karyotypes with 2 and 3 aneuploid cell lines were more frequently detected. X chromosome mosaicism is the most common karyotypic aberration in women undergoing IVF and has 6-fold increased incidence in AMA women compared to younger ones. The present study verifies previous observations that low-level peripheral blood X chromosome mosaicism and the number of aneuploid cell lines observed in women of AMA could be an indication of aneuploidy and poor quality of oocytes contributing to infertility.
DOI: 10.34740/kaggle/dsv/3067332
title: Omicron daily cases by country (COVID-19 variant)
DOI: 10.25345/c5cs2m
title: MassIVE MSV000088704 - GNPS AgNP Capping Molecules from GLucidum and Lbicolor (Mushroom species)
title: Characterization of Capping molecules of silver nanoparticles from mushroom extracts
DOI: 10.6084/m9.figshare.18620330
title: ARRIVE Guidelines checklist for ' Effects of asparaginases and L-carnitine on Western-diet-induced hepatosteatosis in mice'.

description: Study of the effect of asparaginases and L-carnitine on Westrn- diet-induced hepatosteatosis in mice
DOI: 10.6084/m9.figshare.18620330.v3
title: ARRIVE Guidelines checklist for ' Effects of asparaginases and L-carnitine on Western-diet-induced hepatosteatosis in mice'.

description: Study of the effect of asparaginases and L-carnitine on Westrn- diet-induced hepatosteatosis in mice
DOI: 10.6084/m9.figshare.18620330.v2
title: ARRIVE Guidelines checklist for ' Effects of asparaginases and L-carnitine on Western-diet-induced hepatosteatosis in mice'.

description: Study of the effect of asparaginases and L-carnitine on Westrn- diet-induced hepatosteatosis in mice
DOI: 10.5281/zenodo.5880976
title: Isopret input files

description: Input files for isopret (https://github.com/TheJacksonLaboratory/isopret).
DOI: 10.5281/zenodo.5880975
title: Isopret input files

description: Input files for isopret (https://github.com/TheJacksonLaboratory/isopret).
DOI: 10.11583/dtu.14307707
title: Wind resource data from the NEGM/Tjareborg mast (Tjare_2)

description: This resource dataset consists of 10-minute wind speed and wind direction measurements from the met mast at Tjaeborg Enge, Jutland in Denmark next to a large NEG-Micon 1500 kW turbine. The period includes more than one year of resource measurements, which starts in 1998.<br>Detailed site documentation is available here.<br> Public data Resource data: tjare_2.nc (NetCDF)<br>
DOI: 10.11583/dtu.14307707.v1
title: Wind resource data from the NEGM/Tjareborg mast (Tjare_2)

description: This resource dataset consists of 10-minute wind speed and wind direction measurements from the met mast at Tjaeborg Enge, Jutland in Denmark next to a large NEG-Micon 1500 kW turbine. The period includes more than one year of resource measurements, which starts in 1998.<br>Detailed site documentation is available here.<br> Public data Resource data: tjare_2.nc (NetCDF)<br>
DOI: 10.6084/m9.figshare.17151362
title: Supplementary Material for: Metformin Promotes the Hair-Inductive Activity of Three-Dimensional Aggregates of Epidermal and Dermal Cells Self-Assembled In Vitro

description: Introduction: Although it has been reported that the anti-diabetic drug metformin has multiple extra-hypoglycemic activities, such as anti-oxidation, anti-aging and even anti-tumor, topical metformin also can induce hair regeneration, but the precise mechanism involved in that process is still unclear. Objectives: To assess the effect of metformin on hair growth in a mouse hair follicle reconstitution model generated by in vitro self-assembled three-dimensional aggregates of epidermal and dermal cells (3D aggregates). Methods: Epidermal cells and dermal cells were isolated and cultured from the mouse skin of fifty C57BL/6 mouse pups (1-day-old). For tracing the distribution of dermal cells during the self-assembly process of 3D aggregates, the dermal cells were labeled with Vybrant Dil cell-labelling solution and mixed with epidermal cells at 1:1 ratio. Formed 3D aggregates were treated with 10 mM metformin and then were grafted into recipient BALB/c nude mice. The biomarkers (HGF, CD133, ALP, β-catenin and SOX2) associated with the hair-inductive activity of dermal cells were detected in the grafted skin tissues and in cultured 3D aggregates treated with metformin using immunofluorescent staining, quantitative real-time RT-PCR (qRT-PCR), and western blotting. Furthermore, the expression levels of CD133 were also examined in dermal cells with different passage numbers using qRT-PCR and western blotting. Results: Metformin directly stimulates the activity of alkaline phosphatase (ALP) of cultured 3D aggregates, upregulates both the protein and mRNA expression levels of molecular markers (HGF, CD133, ALP, β-catenin and SOX2) and improves the survival rate of reconstituted hair follicles. Moreover, we also found that metformin increases the expression of CD133 in dermal cells thus maintaining their trichogenic capacity that would normally be lost by serial subculture. Conclusions: These results suggest that metformin can promote hair follicle regeneration in vitro through up-regulation of the hair inductive capability of dermal cells, warranting further evaluation in the clinical treatment of male or female pattern hair loss.
DOI: 10.25549/usctheses-c3-448915
title: Deliberating the science of madness: DSM-5 and the polytechtonic rhetorical economy of psychiatric nosological controversy

description: This study examines the rhetorical features of psychiatric nosological controversy. The locus of inquiry is the recent controversial revision of the American Psychiatric Association's (APA) Diagnostic and Statistical Manual of Mental Disorders, now in its fifth edition (DSM-5). The dissertation seeks to answer the following research question: When the field of psychiatry assembles to revise itself, how do previous rhetorical arrangements organize into new vectors, evolve, and cluster together into what becomes a new network consensus (or quasi‐consensus)? ❧ This dissertation contributes to debates in the social study of science and the rhetoric of inquiry about the development and evolution of scientific fields. It contends that as psychiatric knowledge advances, discursive forms embodying old institutional logics and theoretical paradigms leave residues that retain their suasive character. These sedimented rhetorical residues play a significant role in many of the developments and impasses in the controversies surrounding DSM‐5. Our contemporary concepts of psychosis are the result of the projection of tensions between discrete and continuous terminologies, ontological and functional interpretations of health and sickness, and psychodynamic and neurobiological descriptions of the mind into the temporal dimension. This study argues that the inability of psychiatry to resolve a set of internal dilemmas combined with its temporizing can be understood in contemporary terms as a politics of the supplement. ❧ Several major DSM‐5 debates are analyzed, with special focus on the controversy over psychosis risk. Chapter 1 introduces the direct and indirect contexts of DSM‐5. Chapter 2 works out a theoretical toolkit and a model of polytechtonic rhetoric capable of appreciating the historical dynamics of interfield and public controversy. Chapter 3 examines the rhetorical history of 'psychosis,' which requires a larger rhetorical history of psychiatric nosology. This includes an account of the humoral model of pathology, which remains present in contemporary medical rhetoric. Chapter 4 examines the rhetorical history of risk and the evolution of research on early interventions for psychosis to contextualize the contemporary controversy over psychosis risk syndrome. Chapter 5 concludes the study by discussing the implications of these different lines of inquiry for an understanding of the rhetoric of psychiatry in our contemporary late modern epoch. It argues for a reading of DSM‐5 in terms of the 'politics of the supplement,' a field of contestation concerning the risks and benefits of the new technologies of the self with which we (re)define our human nature.
DOI: 10.25919/77d9-0519
title: RV Investigator Voyage IN2019_T03 End of Voyage (EOV) Archive

description: This record describes the End of Voyage (EOV) archive from the Marine National Facility (MNF) RV Investigator research voyage IN2019_T03, titled "ORCA: Using the Investigator radar as a moving reference for the Australian operational radar network." The voyage took place from from Darwin (NT) to Fremantle (WA) between December 22 2019 and January 2, 2020 (AEST). For further information please refer to the voyage documentation links below. Instruments used and data collected include: Regular measurements: Acoustic Doppler Current Profiler (ADCP; 75, 150 KHz ), Cloud Condensation Nuclei counter (CCN), Condensation Particle Counters (CPC), Disdrometer, Greenhouse Gas Analysers (Picarro), Radon and Ozone sensors, CTD, Hydrochemistry, pCO2, Fisheries echosounder (EK60), Multibeam Echosounder (EM710, EM122), Sub-bottom Profiler (SBP120), Gravimeter, GPS Positioning System, Fluorometer, Oxygen optode, Thermosalinographs (TSG), Infrared Sea Surface Temperature Autonomous Radiometer (ISAR), Multiangle Absorption Photometer (MAAP), Nephelometer, Atmospheric Temperature, Humidity, Pressure, Wind and Rain sensors, Photosynthetically Active Radiation (PAR) sensor, Precision Infrared Radiometer (PIR), Precision Spectral Pyranometer (PSP), Starboard and Portside Radiometers, Weather Radar. Voyage-specific measurements: Sea State Cameras, Radiosondes, Micro Rain Radar (MRR), AIRBOX Radon, Mercury Analyser (Tekran), Gas Chromatograph - Electron Capture Detector (uDirac), Greenhouse Gas Analyser (Spectronus), Cloud Radar (BASTA), Cloud and Aerosol Backscatter Lidar (RMAN), Multi-AXis Differential Optical Absorption Spectrometer (MAX-DOAS), mini Micro-Pulse LIDAR (miniMPL), Sonic Anemometer, EZnet, Microplastics, Continuous Plankton Recorder (CPR), Wildlife observations (seabirds, cetaceans and seals). The archive for the IN2019_T03 EOV raw data is curated by the CSIRO NCMI Information and Data Centre (IDC) in Hobart, with a permanent archive at the CSIRO Data Access Portal (DAP, https://data.csiro.au/dap/), providing access to participants and processors of the data collected in the voyage. All voyage documentation is available electronically to MNF support via the local network. Access to voyage documentation for non-CSIRO participants can be made via NCMI_DataLibrarians@csiro.au.
DOI: 10.14284/548
title: SUMES stakeholder workshop: live polling responses of participants

description: Dataset with the responses to live polling questions posed to participants of the SUMES Stakeholder Workshop held on the 22nd of April 2021 on Zoom (tool: Slido).
DOI: 10.5281/zenodo.5820133
title: Combined Article Tables & Figures

description: This spreadsheet includes all the tables and figures presented in the paper: "Selected ‘Starter kit’ energy system modelling data for selected countries in Africa, East Asia, and South America (#CCG, 2021)"
DOI: 10.25549/usctheses-c3-267129
title: A study of the musical contributions of Leo Sowerby
DOI: 10.6084/m9.figshare.18739544.v1
title: Tropospheric Delay Correction of VLBI Stations for the Real-time Orbit Determination of the Chang’E-5 Satellite

description: There are six file folders in the compressed package. The errcrt dataset is about the TSTD, elevation angle and ZTD et al. The gdgz file folder is about the correction data of SHAO because of the height differenc between IGS GNSS station and VLBI station. The iGMASsha file folder is about the ZTD products of BJMY, CUAO and YNKM as reference. The IGS file folder contains the ZTD products of SHAO as reference. The SUM file folder is about the observation start and end time of each VLBI stations. And VLBI DELAY file folder contaions the VLBI delay and its rate with the tropospheric delay corrected by TRO_P, TRO_S and TRO_G.
DOI: 10.6084/m9.figshare.18739544
title: Tropospheric Delay Correction of VLBI Stations for the Real-time Orbit Determination of the Chang’E-5 Satellite

description: There are six file folders in the compressed package. The errcrt dataset is about the TSTD, elevation angle and ZTD et al. The gdgz file folder is about the correction data of SHAO because of the height differenc between IGS GNSS station and VLBI station. The iGMASsha file folder is about the ZTD products of BJMY, CUAO and YNKM as reference. The IGS file folder contains the ZTD products of SHAO as reference. The SUM file folder is about the observation start and end time of each VLBI stations. And VLBI DELAY file folder contaions the VLBI delay and its rate with the tropospheric delay corrected by TRO_P, TRO_S and TRO_G.
DOI: 10.25549/pcra-c14-111279
title: Women's International Convention, Church of God in Christ (45th: 1995: Memphis, TN)
title: 45th  Annual Women's Convention of the Church of God in Christ

description: The souvenir journal of the Women's Convention of the Church of God in Christ. Annually.
DOI: 10.5281/zenodo.5880978
title: Knowledge and perception of community on health-related activities of Inclusive Self Help Groups in three regions of Myanmar and ways for strengthening

description: This data is gathered in 2019.
DOI: 10.5281/zenodo.5880977
title: Knowledge and perception of community on health-related activities of Inclusive Self Help Groups in three regions of Myanmar and ways for strengthening

description: This data is gathered in 2019.
DOI: 10.6084/m9.figshare.18741005
title: Priming and strength level

description: database priming exercise two groups and 3 time asessments
DOI: 10.6084/m9.figshare.18741005.v1
title: Priming and strength level

description: database priming exercise two groups and 3 time asessments
DOI: 10.13145/bacdive24649.20201210.5
title: Thermoanaerobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive24650.20201210.5
title: Caldanaerobius polysaccharolyticus (Cann et al. 2001) Lee et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive24651.20201210.5
title: Calderihabitans maritimus Yoneda et al. 2013

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive24652.20201210.5
title: Thermococcus cleftensis Hensley et al. 2014

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.5877582
title: North Sea Core Thin Section Data pt 1

description: Thin section scans of core samples from key North Sea lithologies, across the Southern, Central and Northern North Sea Basins. Please visit https://www.northseacore.co.uk/data for more information. The scanned images and supporting files can be viewed with the Olympus OlyVia Viewer software. This is third party software and requires the user to register. All thin sections have been scanned in Bright Field (BF), Plane (PPL) and Cross Polarised Light (XPL), and Cross Polarized Light with Luminesce (XPL+L). Full magnification is 10x. Part 1 of the data includes; 15-14a-3 Triassic 16-29a-2X Lower Cretaceous 16-29a-2X Paleocene 16-29a-A4 Upper Cretaceous 21-16-3 Upper Jurassic 21-20b-3 Eocene 44-23-7 Upper Carboniferous 47-15-1X Zechstein Permian
DOI: 10.13145/bacdive24653.20201210.5
title: Thermococcus paralvinellae Hensley et al. 2014

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.5281/zenodo.5877581
title: North Sea Core Thin Section Data pt 1

description: Thin section scans of core samples from key North Sea lithologies, across the Southern, Central and Northern North Sea Basins. Please visit https://www.northseacore.co.uk/data for more information. The scanned images and supporting files can be viewed with the Olympus OlyVia Viewer software. This is third party software and requires the user to register. All thin sections have been scanned in Bright Field (BF), Plane (PPL) and Cross Polarised Light (XPL), and Cross Polarized Light with Luminesce (XPL+L). Full magnification is 10x. Part 1 of the data includes; 15-14a-3 Triassic 16-29a-2X Lower Cretaceous 16-29a-2X Paleocene 16-29a-A4 Upper Cretaceous 21-16-3 Upper Jurassic 21-20b-3 Eocene 44-23-7 Upper Carboniferous 47-15-1X Zechstein Permian
DOI: 10.13145/bacdive24654.20201210.5
title: Actinomadura xylanilytica Zucchi et al. 2013

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive24655.20201210.5
title: Thermotoga profunda Mori et al. 2014

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive24656.20201210.5
title: Thermotoga caldifontis Mori et al. 2014

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive24658.20201210.5
title: Photobacterium aestuarii Lo et al. 2014

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive24659.20201210.5
title: Vibrio parahaemolyticus (Fujino et al. 1951) Sakazaki et al. 1963 emend. West et al. 1986

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.