cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.4121/uuid:07ca0913-55ae-418f-9767-05eafc3e9817
title: Strong population structure but no equilibrium yet: Genetic connectivity and phylogeography in the kelp Saccharina latissima (Laminariales, Phaeophyta): Supplementary material Table S2

description: Microsatellite data for Saccharina latissima
DOI: 10.4121/uuid:463b9d1b-3b70-4797-89e8-0d32603a8469
title: unwar: raw footage from the film: ‘Sarajevo Diary: from Bad to Worse’

description: The video files were created during the years 1992 and 1993 by film director Dom Rotheroe and narrator Bill Tribe. The raw footage were created to document the war destruction of Sarajevo during the military siege (1992-1996) by Serbian forces as well citizens’ non-violent spatial reactions to the destruction and survival modes.
DOI: 10.4121/uuid:1ccca375-68ca-4cb6-8fc0-926712f50404
title: Small value-of-time experiment, Netherlands

description: Description of the data set: These data are collected with the aim to analyse the impact of the decision rule that is used when constructing the experimental design on the statistical efficiency of the design. It focusses on 2 decision rules: Random Utility Maximisation (RUM) and Random Regret Minimisation (RRM). Each respondents in the data set was presented 10 choice tasks. 4 choice tasks belong to a RUM efficient experimental design and 4 choice tasks belong to a RRM efficient experimental design. The RUM and RRM efficient designs have 1 choice task in common. Therefore there are 3 remaining choice tasks. These choice tasks are added with no particular decision rule in mind.
DOI: 10.4121/uuid:2704f813-d23b-43b5-b837-fdb02ceef261
title: Replication dataset: Explaining artificial side channel dynamics using data analysis and model calculations.

description: The side channel system at Gameren was monitored between 1996 and 2018. The dataset contains bed level data in the side channels from 1996 to 2018 and discharge measurements between 2000 and 2002. Grain size samples were collected in 2017 and 2018 in the three side channels. In addition, a hydrodynamic model was set up to compute the hydrodynamic conditions in the side channels.
DOI: 10.4121/uuid:646eaf3f-c90b-4f22-89bf-8986804def3c
title: ERA5 reanalysis data for Airborne Wind Energy Resource Analysis

description: ERA5 reanalysis data for the publication "Airborne Wind Energy Resource Analysis" submitted for peer review in Renewable Energy. Generated using Copernicus Climate Change Service Information 2018.
DOI: 10.4121/uuid:4eab4339-52d6-4328-81b2-640544c05438
title: Monitoring bank erosion with Unmanned Aerial Vehicle (UAV) during a low-water event

description: Dataset to analyze a methodology to monitor bank erosion with an Unmanned Aerial Vehicle (UAV)
DOI: 10.4121/uuid:a52fc7c0-817b-4b37-bb97-bc6e560ac5c3
title: Thematic cluster groups for examining digital practices related to the 2015 Victory Day on LiveJournal

description: Description of thematic cluster groups produced as part of research on the use of the Russian blogosphere in the context of the 2015 Victory Day commemoration in Russia.
DOI: 10.4121/uuid:c0be318c-9858-4a05-a546-782e29b4abef
title: Data presented in the paper "Quantifying bed level change at the transition of tidal flat and salt marsh: can we understand the lateral location of the marsh edge?"

description: Bed level dynamics at the interface of the salt marsh and tidal flat have been highlighted as a key factor connecting the long-term bio-geomorphological development of the marsh to large-scale physical forcing. Hence, we aim to obtain insight into the factors confining the location of the marsh edge (i.e., boundary between tidal flat and salt marsh). A unique dataset was collected, containing measurements of daily bed level changes (i.e., integrative result of physical forcing and sediment properties) at six intertidal transects in the North Sea area. Moreover, various biophysical parameters were measured, such as sediment characteristics, waves, inundation time and chlorophyll-a levels.
DOI: 10.4121/uuid:2062f981-9e7c-4fc3-9632-065a8706f3ac
title: Dataset on Entrepreneurship and Economic Growth Data of China over 1978-2008

description: Data on Entrepreneurship and Economic Growth of China over 1978-2008
DOI: 10.4121/uuid:7efe3022-27bf-4a6d-8961-49d48ff31b05
title: Hyper-cross-linked thin polydimethylsiloxane films

description: This dataset is a collection of the data used for the manuscript: 'Hyper-cross-linked thin polydimethylsiloxane films' This dataset includes all figure data and raw data
DOI: 10.4121/uuid:dce5b3f9-5bd8-49a3-8108-936ded3051f9
title: Data belonging to the thesis: Corpora Non Agunt Nisi Fixata: Ligand Receptor Binding Kinetics in G Protein-Coupled Receptors.

description: The present thesis focuses on the pharmacological concept of drug-target interaction, which dates back to the beginning of modern pharmacology. A traditional equilibrium metrics-based rationale (i.e. optimization of drug affinity leads to better efficacy and safety) is unable to prevent current high attrition rates in the early phase of drug discovery. In the past decade drug-target binding kinetics (i.e. association and dissociation rate constants, residence time) has been gaining more and more attention, which constitutes a paradigm shift to better predict parameters of drug efficacy and safety. We decided to investigate binding kinetics of G protein-coupled receptors (GPCR), since GPCR are involved in various critical physiological and pharmacological functions, being the target of about 30% of all drugs on the market. Both the human cannabinoid receptor 1 and the human adenosine A1 and A3 receptors were chosen as prototypical GPCR as well as potential drug targets. The binding kinetics investigations described in this thesis provide a better and multi-faceted understanding of drug-target interactions and offer suggestions for the design of better ligands with an appropriate kinetic profile, new technologies for rapid kinetic assessment, and ultimately suitable evaluation schemes for a better translation towards effective and safe drugs.
DOI: 10.4121/uuid:ef451c83-8ff4-4d07-a88f-ff10bcf50863
title: Steady-state cornering experiment result of 2-axle steering vehicle

description: The dataset includes the gyro heading, the GPS velocity heading, yaw rate, vehicle speed at the gravity center, and vehicle lateral acceleration. The research objective is to obtain the experiment data for calculating the vehicle side-slip angle. The type of research is original research. The data are collected by an ARK-5261 industrial personal computer with a PCI-1712 data acquisition card. The type of data is xlsx.
DOI: 10.4121/uuid:948c10fe-7ea5-47f3-bdb2-d5b0f908820b
title: Comparison of 432 Pseudomonas strains through integration of genomic, functional, metabolic and expression data

description: Pseudomonas is a highly versatile genus containing species that can be harmful to humans and plants while others are widely used for bioengineering and bioremediation. We analysed 432 sequenced Pseudomonas strains by integrating results from a large scale functional comparison using protein domains with data from six metabolic models, nearly a thousand transcriptome measurements and four large scale transposon mutagenesis experiments. Through heterogeneous data integration we linked gene essentiality, persistence and expression variability. The pan-genome of Pseudomonas is closed indicating a limited role of horizontal gene transfer in the evolutionary history of this genus. A large fraction of essential genes are highly persistent, still non essential genes represent a considerable fraction of the core-genome. Our results emphasize the power of integrating large scale comparative functional genomics with heterogeneous data for exploring bacterial diversity and versatility.
DOI: 10.4121/uuid:1453a13b-10ae-418f-a1ae-4acf96028118
title: Lightweight Statistical Model Checking in Nondeterministic Continuous Time (Artifact)

description: In our ISoLA 2018 paper titled "Lightweight Statistical Model Checking in Nondeterministic Continuous Time", we describe the challenges and state of the art in applying lightweight scheduler sampling to three continuous-time formalisms: After a review of recent work on exploiting discrete abstractions for probabilistic timed automata, we discuss scheduler sampling for Markov automata and apply it on two case studies. We provide further insights into the tradeoffs between scheduler classes for stochastic automata. Making use of our implementations of lightweight scheduler sampling in the 'modes' statistical model checker within the Modest Toolset, we present extended experiments and new visualisations of the distribution of schedulers. This artifact contains (1) the version of 'modes' and (2) the model files used for our experiments, (3) the raw experimental results, (4) summarising tabular views of those results (from which we derived the tables of results and histograms shown in the paper), and (5) the Linux shell scripts that we used to perform the experiments.
DOI: 10.4121/uuid:3d61dc0e-2a12-4d0f-ad0d-ce058bde82b0
title: Data presented in the paper “Occurrence and life history characteristics of tropical flatfishes at the coral reefs of Curaçao, Dutch Caribbean"

description: Research objective: the collection of life history characteristics of tropical flatfishes occurring at the fringing reefs of Curaçao. Type of research: field work on coral reefs. Method of data collection: multiple scuba dives year round by two divers. Type of data: various body parameters on individual flatfishes of various species
DOI: 10.4121/uuid:557b6445-5d40-402a-b214-93d7c6415195
title: Influence of optical aberrations on axial position determination by photometry

description: Supplementary data: “Influence of optical aberrations on axial position determination by photometry.” Rasmus Ø. Thorsen, Christiaan N. Hulleman, Mathias Hammer, David Grünwald, Sjoerd Stallinga, and Bernd Rieger Mathias Hammer, David Grünwald, Sjoerd Stallinga, and Bernd Rieger
DOI: 10.4121/uuid:89cd9575-58e7-4e23-951a-2a8728b42d70
title: Data from: X-Ray Diffraction of Iron Containing Samples: the Importance of a Suitable Configuration

description: RD results belonging to paper ‘X-Ray Diffraction of Iron Containing Samples: the Importance of a Suitable Configuration’
DOI: 10.4121/uuid:dd40c78c-13c8-4771-80e4-8d0f47120c26
title: Structure dependence of molecular reactions on surfaces

description: The research presented in this thesis makes use of small molecules (as H2 , D2 and O2 ) on well-defined single crystal surfaces (flat Pt(111), flat Cu(211) and curved Pt(111)) to elucidate the role of surface structure and degrees of freedom in the reactant in specific surface reactions.
DOI: 10.4121/uuid:95600630-8fb2-45b2-bf49-a6a14ffc4fde
title: Dataset for the study on Interactively building a representation of actions and values

description: Personal electronic partners can play an important role in people's daily lives, especially for vulnerable user groups. However, to achieve an e-partner that can support a wide range of users it should personalize in a manner that is closely related to the users actual behavior, and respects their values. We, therefore, propose to use Action Identification Hierarchies (AIH) to represent the user's actions and values. In an qualitative study, we investigated how users themselves can build their AIH in conversation with an agent. Both visually impaired (n=7) and university workers (n=9) participated, talking about traveling and stressful behavior respectively. Our goals were to see how understandable the AIH was to different users, whether the AIH content was subjectively correct, and how usable the system was. The results from this study are an important step in applying AIH's to different user groups, and highlight the importance of understandability, usability and flexibility.
DOI: 10.4121/uuid:9032af40-6cd0-409d-be0d-76fe0f4ed576
title: Data from: Apoplastic effectors, MAMPs and surface immune receptors- the battlefront of the Phytophthora infestans - potato interaction

description: Potato late blight is caused by the oomycete pathogen Phytophthora infestans, which triggered the great Irish famine in the 1840s. In this thesis, I studied various apoplastic effectors from P. infestans and their receptors in the host, with the ultimate aim to achieve a broader and more durable resistance to late blight.
DOI: 10.4121/uuid:01e4e140-a7ce-4f15-a258-b89f660e8138
title: Power handling and vapor shielding of pre-filled lithium divertor targets

description: This dataset is the replication package on experimentation and modeling, accompanying the paper: Power handling and vapor shielding of pre-filled lithium divertor targets Magnum-PSI
DOI: 10.4121/uuid:5f168a76-cc26-42d6-a67d-48be9c978309
title: Generated and industrial PNML models with generated log traces (in XES)

description: This data set consists of two sets of models and log traces. Generated PNML and XES instances, and small-scale industrial PNML models with generated XES traces. Used in the paper "Maximizing Synchronization for Aligning Observed and Modelled Behaviour" - BPM'18
DOI: 10.4121/uuid:5fcf4247-da0e-4119-adcd-fc90b85b7f03
title: Replication package Separation of transport in slow and fast time-scales using modulated heat pulse experiments (hysteresis in flux explained)

description: Old and recent experiments show that there is a direct response to the heating power of transport observed in modulated ECH experiments both in tokamaks and stellarators. This is most apparent for modulated experiments in the Large Helical Device (LHD) and in Wendelstein 7 advanced stellarator (W7-AS). In this paper we show that: 1) This power dependence can be reproduced by linear models and as such hysteresis (in flux) has no relationship to hysteresis as defined in the literature; 2) Observations of hysteresis (in flux) and a direct response to power can be perfectly reproduced by introducing an error in the estimated deposition profile as long as the errors redistribute the heat over a large radius; 3) Non-local models depending directly on the heating power can also explain the experimentally observed Lissajous curves (hysteresis); 4) How non-locality and deposition errors can be recognized in experiments and how they affect estimates of transport coefficients; 5) From a linear perturbation transport experiment, it is not possible to discern deposition errors from non-local fast transport components (mathematically equivalent). However, when studied over different operating points non-linear-non-local transport models can be derived which should be distinguishable from errors in deposition profile. To show all this, transport needs to be analyzed by separating the transport in a slow (diffusive) time-scale and a fast (heating/non-local) time-scale, which can only be done in the presence of perturbations.
DOI: 10.4121/uuid:c65df664-f905-49c0-a47b-eae5682c0d6b
title: OpenFoam Models Stability XblocPlus Crest Element

description: This dataset contains the input and output files of OpenFoam models. The models are used to nummerically determine the stability of a XblocPlus element. The 2D porous wave model and a 3D single phase model are stable. The 3D multiphase model is unstable.
DOI: 10.4121/uuid:01ec8b10-8356-49ed-b329-66d5efb9fc90
title: Agent-Based Model for Information Flows of Rohingya Refugee Camps in Cox's Bazaar, Bangladesh

description: This is a simulation model for Rohingya refugee camps condition in Cox's Bazar, Bangladesh. The main objective is to behaviorally simulate different monitoring time cycle implementation of humanitarian organization(s) assigned for the monitoring process. Currently, as of August 2018, IOM is the sole monitoring organization for Rohingya refugee camps in Cox's Bazar. Through exploratory data input, the monitoring mechanism under various monitoring conditions (including possibility of information sharing mechanism within different monitoring organizations) can be observed dynamically.
DOI: 10.15156/bio/sh271887.07fu
title: SH271887.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh271888.07fu
title: SH271888.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh271889.07fu
title: SH271889.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh271890.07fu
title: SH271890.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh271891.07fu
title: SH271891.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh271892.07fu
title: SH271892.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh271893.07fu
title: SH271893.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.