cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26191019.v1
title: Mycorrhization enhances plant growth and stabilizes biomass allocation under drought

description: Plants and their symbionts, such as arbuscular mycorrhizal (AM) fungi, are increasingly subjected to various environmental stressors due to climate change, including drought. As a response to drought, plants generally allocate more biomass to roots over shoots, thereby facilitating water uptake. However, whether this biomass allocation shift is modulated by AM fungi remains unknown.
DOI: 10.6084/m9.figshare.7553063.v1
title: AI Mobile

description: AI and mobile are interlinked.
DOI: 10.17632/5vtg4rk89j
title: Arabidopsis-based sugarcane dual-layered network

description: This network file was used to produce the paper entitled "Arabidopsis-based dual-layer biological network analysis elucidates fully modulated pathways related to sugarcane resistance upon biotrophic pathogen infection" published in Frontiers in Plant Science, section Plant Systems and Synthetic Biology.
DOI: 10.17632/684mrzfkzd
title: EXLAM, a program for the calculation and expansion of local model exchange potentials

description: Title of program: EXLAM Catalogue Id: AANY_v1_0 Nature of problem The free-electron-gas and semi-classical local model exchange potentials are calculated. The resulting model exchange potential is expanded in Legendre polynomials in a single-center coordinate system. Versions of this program held in the CPC repository in Mendeley Data AANY_v1_0; EXLAM; 10.1016/0010-4655(83)90057-7 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/c8ypj8fftg
title: Data: Fifteen 255W Panels Connected Lithium-Ion Battery Bank

description: This dataset is in support of my research.

I had earlier got remark by someone- If these is my work or stolen or copied paste or other ... remark, from some graduate/pg/plagiarised phd degree holder.

As I wont later entertain any question/remark and I will stop replying lateron (which may start to happen next week or next year). I have uploaded this for free download on this open-access myself.
DOI: 10.17632/j37rwkbtmm
title: Data for: Atmospheric and Ionospheric Disturbances associated with 2018 M 6.4 Hualien Earthquake

description: The atmospheric data were retrieved from NASA online database GIOVANNI to inspect Taiwanese earthquake 2018 where significant anomalies were found and ionospheric TEC data was extracted from ground based IGS receivers to monitor ionospheric conditions prior to the earthquake
DOI: 10.6084/m9.figshare.23684778.v1
title: Data Excel sheet for <strong>Study of differential neutrophil to lymphocyte ratio and differential monocyte to lymphocyte ratio in patients with Tuberculosis in a coastal city of India.</strong>

description: This is the data collection sheet for the study <strong>Study of differential neutrophil to lymphocyte ratio and differential monocyte to lymphocyte ratio in patients with Tuberculosis in a coastal city of India.</strong>
DOI: 10.6084/m9.figshare.7187150.v1
title: Evaluation of metals in tomato sauces stored in different types of packaging

description: Abstract There is a growing concern about health and food safety when it comes to processed food. In the present study, it has been hypothesized that tomato sauces contain high amounts of metals possibly leached from packaging. Concentrations of As, Cd, Pb, Cr, Ni, Sn and Sb were determined by ICP-MS in tomato sauces stored in metallic, plastic, cellulosic and glass packaging. Packaging composition was determined by XRF. This study has also determined Cr and Sn content, by GF AAS, in simulant solutions prepared to be in contact with the four types of packaging. The results showed that there was no significant difference between the concentrations of metals in products stored in different types of packaging (p&gt;0.05), except for Sn and Ni. Canned products presented higher concentrations of tin (0.19 mg/kg); and nickel contents showed a range of 0.05 to 0.1 mg/kg. The only metal that was in higher concentration than the established by law (0.1 mg/kg) was Cr (mean value of 0.3 mg/kg). The XRF identified the presence of chromium in plastic, cellulosic and metallic packaging, and tin only in cans. For simulant solution, the tin from cans was the only identified migrant and chromium migration was not detected.
DOI: 10.6084/m9.figshare.7378064.v1
title: Supplementary Material for: Lung Carcinoids: Long-Term Surgical Results and the Lack of Prognostic Value of Somatostatin Receptors and Other Novel Immunohistochemical Markers

description: <b><i>Background/Aims:</i></b> Lung carcinoids (LCs) are often diagnosed at an early stage and surgical intervention becomes the next phase of treatment. To date, there is lack of long-term follow-up data after surgery and prognostication based on WHO classification criteria and evolving prognostic markers, particularly the expression of somatostatin receptors (SSR). <b><i>Methods:</i></b> We included 102 consecutive patients (72 women; age at baseline 51 ± 16 years [mean ± SD]) with LCs, who underwent thoracic surgery (<i>n</i> = 99) and/or laser treatment (<i>n</i> = 8). Hospital charts were reviewed for clinico-pathological parameters. Immunohistochemical (IHC) expression of SSR1–5 and other novel markers were studied with regard to their prognostic value. <b><i>Results:</i></b> Five- and 10-year overall survival (OS) was 96 and 83% respectively; relative survival (RS) was 101 and 93% respectively; and event-free survival (EFS) was 80 and 67% respectively. Independent prognostic factors for OS, RS and/or EFS were age at diagnosis, histopathological type and the presence of ipsilateral mediastinal subcarinal lymph node metastases. Macro-radicality of resective surgery and its extent were associated with increased OS and EFS. The IHC expression of SSR1–5 and other novel markers was not associated with OS or EFS. <b><i>Conclusion:</i></b> The long-term outcome of surgically treated patients with LCs is favourable. Age, histopathological type and ipsilateral mediastinal subcarinal lymph node status at baseline were independent prognostic factors for survival and disease recurrence or progression. The extent of surgery and operative macro-radicality also had an impact on prognosis. None of the IHC markers tested appeared to be associated with disease prognosis.
DOI: 10.6084/m9.figshare.7764647.v2
title: BDHQ_data-sheet

description: Data sheet including BDHQ and other health idices.The values in PHQ-9, STAI-state, STAI-trait, and PSQI-J indicate total scores. The values in MILK1, MILK2, MEAT1, MEAT2, MEAT3, MEAT4, FISH1, FISH2, FISH3, FISH4, FISH5, FISH6, EGG1, SOY1, SOY2, PTT1, VEG1, VEG2, VEG3, VEG4, VEG5, VEG6, VEG7, VEG8, VEG9, VEG10, VEG11, SWT1, SWT2, SWT3, SWT4, FRT1, FRT2, FRT3, MAYO1, CRL1, CRL2, CRL3, CRL4, CRL5, Noodles, BEV1, BEV2, BEV3, BEV4, BEV5, SGR, RICE, and MISO indicate values that are energy-adjusted by density methods (g/1,000 kcal).
DOI: 10.6084/m9.figshare.14562678.v1
title: GE_elev_data

description: Elevation differences
DOI: 10.6084/m9.figshare.28195847.v1
title: <b>Table S1.</b> CyTOF panel designed with thirty-two surface proteins enriched with myeloid surface proteins

description: This study assesses the state of circulating monocytes in diabetes, with or without delayed gastric emptying, using a Streptozotocin (STZ)-induced mouse model, CyTOF, and computational analysis. Our findings show two classical monocyte subsets to be altered in the setting of diabetes with delayed gastric emptying and possible role of monocyte trafficking via the Ccr2-Ccl2 axis. All experiments were conducted in compliance with the National Institutes of Health Guide for the Care and Use of Laboratory Animals. All protocols were authorized by the Mayo Clinic Institutional Animal Care and Use Committee (A561020). Madhusudan Grover has received research grants from Takeda and Alfasigma Pharmaceuticals, as well as advisory fee from Evoke and Ardelyx Pharmaceuticals. Ruixue Hou, Yogesh Bhattarai, and Jill Wykosky are employees and shareholders of Takeda. Richard Myers and Alan J. Burns were employees during the time that this study was conducted and shareholders of Takeda. The rest of the authors declare no competing interests.
DOI: 10.6084/m9.figshare.28349114.v2
title: Data&Code

description: test
DOI: 10.6084/m9.figshare.29143349.v1
title: extended data-merged.pdf

description: This is qualitative research conducted among a Particularly Vulnerable Tribal Group and their stakeholders who engage in the improvement of the health status of them in Udupi district, South India.
DOI: 10.17632/hpd9mwpc6h
title: Direct Impacts of Fire on Vertebrates

description: The information available in this CSV file represents the identification of vertebrate animals negatively impacted by fire in Brazil (killed by fire or burned). We built a database of images received by firefighters, managers and people directly involved in fighting fires and implementing prescribed burns. Additionally, databases provided by the non-governmental organization (NGO) Onçafari and the Wild Animal Rehabilitation Center (CRAS) of the State of Mato Grosso do Sul (MS) were included, as well as three databases published by partners (available in Tomas et al., 2021; Brack et al., 2024; de França Gomes, 2024), and photographs collected from online news sources displaying such information. 
We also compiled: i) biome, ii) state, iii) location or name of the Protected Area, iv) fire event (prescribed burn or wildfire), v) class, vi) order, vii) family, viii) species, and ix) body size. Animals were classified into three body size categories: small (less than 1 kg), medium (between 1 kg and 7 kg), and large (greater than 7 kg), based on the average weight of the species.
This database is supported by the citizen science initiative and is part of the first collaborator's master's research.

Tomas, W. M., Berlinck, C. N., Chiaravalloti, R. M., Faggioni, G. P., Strüssmann, C., Libonati, R., ... & Morato, R. (2021). Distance sampling surveys reveal 17 million vertebrates directly killed by the 2020’s wildfires in the Pantanal, Brazil. Scientific Reports, 11(1), 23547. https://doi.org/10.1038/s41598-021-02844-5
Brack, I. V., Cordeiro, J. L., Kindel, A., Rangel, B. Z., Crawshaw, D., Heiermann, D., ... & de Oliveira, L. F. (2024). Spatial modelling and estimation of mammals' mortalities by Pantanal 2020 megafires. Journal of Applied Ecology, 61(11), 2848-2859. https://doi.org/10.1111/1365-2664.14789
de França Gomes, B. (2024). Efeitos diretos e indiretos do fogo sobre pequenos vertebrados de áreas campestres. Tese (Doutorado). Instituto de Biociências da Universidade de São Paulo, 165 p.
DOI: 10.17632/hwdtghttp7
title: Mechanical-harvest Soybean Images Dataset

description: Soybean is the world's main grain and oil crop. The crushing rate and impurity rate are important indicators for measuring the quality of mechanized soybean harvesting. The online monitoring of soybean crushing rate and impurity rate based on deep learning has become a current research hotspot. This dataset is a set of soybean sample images derived from the mechanized harvesting process. This dataset can be used for training, validation, and testing of deep learning models. The dataset provides 40 original soybean sample images. In order to enrich the dataset, the original images were enhanced by scaling, rotating, flipping, filtering, and adding noise, expanding to 800 images. This dataset stores various parts of data in the VOC2007 dataset format. The folder size of the dataset is 328MB.
DOI: 10.6084/m9.figshare.20325165.v1
title: Fog droplet size distributions in Nanjing, China

description: During the winters of 2017 and 2018, we conducted two comprehensive field experiments on the physicochemical characteristics of the urban fog in the north of Nanjing (32.2°N, 118.7°E) in Eastern China. The observational site is located at Nanjing University of Information Science & Technology (NUIST), near residential and industrial areas with relatively high values of aerosol number concentration. Here, the fog droplet size distributions (FDSDs)are available, which was measured by a Fog Monitor (model 100, FM-100) from the Droplet Measurement Technologies (DMT, USA) in both experiments. Before each experiment, we calibrated the FM-100 using monodisperse standard glass particles to ensure the reliability of the measurements. During the two fog experiments, eight fog cases with 88962 FDSDs were sampled.
DOI: 10.6084/m9.figshare.22728368.v1
title: humann_pathabundance_cpm_stratified.tsv

description: Metagenomic sequence analysis. Stratified pathway abundance analysis in counts per millions (CPM).
DOI: 10.6084/m9.figshare.28409729.v1
title: <b>Live cell GLUT4 translocation assay reveals </b><b><i>Per3</i></b><b> as a novel regulator of circadian insulin sensitivity in skeletal muscle cells.</b>Rashmi Sivasengh, Andrew Scott, Brendan M. Gabriel<sup>2025</sup>

description: Raw data from:<br><br><b>Live cell GLUT4 translocation assay reveals </b><b><i>Per3</i></b><b> as a novel regulator of circadian insulin sensitivity in skeletal muscle cells.</b>Rashmi Sivasengh<sup>1,2</sup>, Andrew Scott<sup>1</sup>, Brendan M. Gabriel<sup>1,2*</sup><sup><em>1</em></sup><i>The Rowett Institute of Nutrition and Health, School of Medicine, Medical Sciences, Nutrition, University of Aberdeen, Aberdeen, United Kingdom</i><sup><em>2</em></sup><i>Aberdeen Cardiovascular & Diabetes Centre, School of Medicine, Medical Sciences, Nutrition, University of Aberdeen, Aberdeen, United Kingdom</i><br><b>* Correspondence:</b><br>Dr Brendan M. Gabriel.The Rowett Institute, University of Aberdeen, Ashgrove Rd W, Aberdeen AB25 2ZD, Aberdeen, UK.<br>brendan.gabriel1@abdn.ac.uk
DOI: 10.6084/m9.figshare.5104549.v1
title: Supplementary Material for: Wilson’s Disease: A Great Masquerader

description: <i>Background:</i> Wilson’s disease (WD) is a treatable autosomal recessive metabolic disorder which could lead to protean hepatic or neurologic manifestations. WD could mimic many neurologic disorders and is often diagnosed with a long delay. This study describes central nervous system manifestations of a group of Iranian patients with neurologic WD. <i>Methods:</i> Data from case records of patients with neurologic WD presenting at a referral university hospital and a private clinic in Tehran from 1984 to 2004 were analyzed. <i>Results:</i> Fifty patients from 44 unrelated families with WD were identified, whose mean duration of follow-up was 51.8 (±58.5) months. The median age of onset of neurologic symptoms in 37 patients with primary neurologic or simultaneous hepatic-neurologic presentation was 16 (10–38) years, whereas in 13 patients with prior hepatic damage, this was 18.5 (11–34) years. The 6 most common manifestations were dysarthria (80%), drooling (48%), tremor in limbs (44%), abnormal gait (44%), psychiatric and/or sleep symptoms (44%), and dystonia in limbs (42%). <i>Conclusion:</i> Neurologic WD has heterogeneous manifestations and should be considered in young patients presenting with dysarthria, drooling, any kind of movement disorders or psychiatric symptoms.
DOI: 10.6084/m9.figshare.22691371.v2
title: Untitled Item

description: The MIDOG++ dataset represents an extension of the data set used in the MIDOG 2021 and 2022 challenges. We provide region of interest images from 503 histological specimens of seven different tumor types with variable morphology: breast carcinoma, lung carcinoma, lymphosarcoma, neuroendocrine tumor, cutaneous mast cell tumor, cutaneous melanoma, and (sub)cutaneous soft tissue sarcoma. The human and canine samples were processed and stained at different human and veterinary pathology laboratories with standard H&E dye and digitized with different digital whole slide image scanners. We provide labels for 11,937 mitotic figures that have been differentiated against 14,351 imposter cells in a blinded consensus by two pathologists and a final decision by a third pathologist for disagreed labels.
DOI: 10.6084/m9.figshare.24933312.v3
title: Strategy maps

description: Binary 1km resolution maps of the area suitable for each of 19 different land-based climate mitigation strategies. These maps are associated with a publication currently in press with Global Change Biology (09/10/2024), also available as a preprint: https://doi.org/10.1101/2024.01.04.574063. Please note that some methods differ between what is described in the preprint and what is mapped in this version of the dataset. Updated code identifying all input data sources and the process for map derivation can be found on Github: https://github.com/ebeaury/Land-based-climate-mitigation. Please contact Evelyn Beaury* with any questions associated with map derivation and publication. Maps are described in detail in the manuscript text and in supporting information.Reference for the manuscript:Beaury, E.M.B, Smith, J.R., Levine, J. Global suitability and spatial overlap of land-based climate mitigation strategies. Global Change Biology. In press.<br>*eve.beaury@gmail.com
DOI: 10.6084/m9.figshare.26190623.v1
title: SAGs decontaminated with MDMcleaner from the environmental SCG dataset (Berube et al. 2018)

description: 28 SAGs of a SCG environmental dataset extracted from Berube et al. 2018; (NCBI BioProject PRJNA445865). The genomes were assembled from trimmed reads and decontaminated with MDMcleaner.
DOI: 10.6084/m9.figshare.28604279.v2
title: Genome annotation of Liparis tanakae

description: Genome annotation of Liparis tanakae
DOI: 10.6084/m9.figshare.4793611.v1
title: Expression data for BRAINEAC with R code to produce coexpression networks

description: Data used in <br><br>http://biorxiv.org/content/early/2017/04/18/125450
DOI: 10.6084/m9.figshare.5809653.v1
title: Supplementary Data for A Damped Oscillator Imposes Temporal Order On Posterior Gap Gene Expression In Drosophila

description: Raw data used in "A Damped Oscillator Imposes Temporal Order on Posterior Gap Gene Expression in <em>Drosophila</em>" by Verd B, Clark E, Wotton KR, Janssens H, Jiménez-Guri E, Crombach A & Jaeger J (PLOS Biology 2018).Data Record 1Images and extracted expression profiles of <em>Drosophila</em> wildtype embryos stained for mRNA expression of the gap gene <em>giant</em> (<em>gt</em>). These data are also available via http://superfly.crg.eu."*prof.dat" files contain average Red, Green, and Blue pixel intensity values of a 10% band along the anterior--posterior axis of the corresponding embryo. We refer to Crombach et al. (PLoS One 2012) for details on the placement of the band and the extraction of RGB values.Data Record 2Images and extracted expression profiles of <em>Drosophila</em> embryos derived from <em>caudal</em> (<em>cad</em>) germline clones stained for mRNA expression of the gap gene <em>giant</em> (<em>gt</em>). These embryos are homozygous mutant for maternal <em>cad</em>, but carry one paternal zygotic copy of <em>cad</em>.See Data Record 1 for details on file formats.Data Record 3"{wt|glc}_single_boundary_data.csv" files contain extracted positions of <em>gt</em> expression domain boundaries from individual embryos (WT = wildtype, GLC = embryos derived from <em>cad</em> germline clones)."{wt|glc}_integrated_boundary_data.csv" files contain averaged positions of <em>gt</em> expression domain boundaries integrated across embryos. We provide mean, median, standard deviation (stdev), and median absolute deviation (mad).This data record contains data for <em>gt</em> expression domain boundaries in the trunk region of the embryo (35--90% A-P position).
DOI: 10.6084/m9.figshare.6328292.v3
title: Standard setting for mastoidectomy survey results

description: The file "Standard Setting Raw Data.csv" contains the results of a survey of attending otologic surgeons. The associated file "surveytext.pdf" contains the text of the survey, which was delivered online. The file "metric_names.csv" has a mapping from the abbreviations used in the column names in the raw data to the text used in the survey.<br><br>The column names in the raw data are encoded in the form `*metricname*_(u,s,c)` where "`_u`" refers to the question for the metric "without supervision" (u means "unsupervised"), "`_s`" refers to "with supervision" and "`_c`" refers to the free comment field. The meaning of the other fields should be clear from the survey text.<br>The raw data values are recorded as 1 through 5 but were interpreted as 0 through 4, so that the sum of the values in an actual evaluation would have 0 as the lowest attainable score.<br>
DOI: 10.6084/m9.figshare.c.3647507_d5.v1
title: Additional file 1: Table S1. of Transcriptome analysis in switchgrass discloses ecotype difference in photosynthetic efficiency

description: Analysis of variance for the number of RNA-Seq clean reads for AP13, K5 and VS16 switchgrass genotypes across three replicates (XLSX 8707Â kb)
DOI: 10.6084/m9.figshare.14540148.v1
title: Supplementary Material for: Efficiency and Clinical Outcomes of Moses Technology with Flexible Ureteroscopic Laser Lithotripsy for Treatment of Renal Calculus

description: <b><i>Objective:</i></b> The aim of the study was to compare the efficiency and clinical outcomes of Moses contact mode (MCM) and regular dusting mode (RDM) during flexible ureteroscopic lithotripsy (FURL) for treatment of renal calculus. <b><i>Methods:</i></b> This retrospective analysis examined 216 patients with renal calculus who underwent FURL with MCM or RDM between March 2015 and January 2020. Stone characteristics, including size, volume, and density, were collected. Laser parameters, including laser type, laser working time, laser pause time, and foot-pedal use, were automatically recorded by the lithotripter work panel. The percentages of laser working time and laser pause time, stone fragmentation efficiency (SFE; volume/laser working time), postoperative complications, including fever and acute renal failure (ARF), stone-free rate (SFR), and the need for auxiliary procedures were determined. <b><i>Results:</i></b> There were no significant differences in preoperative demographic and stone characteristics between the MCM group and the RDM group. The MCM group had a shorter laser working time (4.99 ± 1.06 vs. 5.94 ± 0.96 min, <i>p</i> &lt; 0.001) and a greater SFE (137.86 [163.78–114.38] versus 114.94 [132.06–101.34] mm<sup>3</sup>/min, <i>p</i> &lt; 0.001), which shortened the overall operative time (18.39 ± 5.13 vs. 21.17 ± 6.78 min, <i>p</i> = 0.001). There were no differences in postoperative complications, including fever and ARF, SFR (86.8 vs. 85.3%, <i>p</i> = 0.743), and auxiliary procedures between the 2 groups. <b><i>Conclusions:</i></b> Using Moses laser technology with FURL significantly reduced laser working time and increased SFE, which shortened overall operative time. Urologists should consider this new instrument for the clinical management of renal calculus.
DOI: 10.6084/m9.figshare.4765906.v7
title: A model to estimate seabird field metabolic rates: Data

description: A list of the data and their souces.
DOI: 10.6084/m9.figshare.1451279.v1
title: PLoS_dataset

description: minimal data for PLoS submission
DOI: 10.6084/m9.figshare.22189003.v6
title: Code and Data

description: The output data from our model and evaluation is included here.
DOI: 10.6084/m9.figshare.22532314.v3
title: Oh7B DRILs Dataset: Goss's wilt and MDR mapping

description: This is the data that accompanies the manuscript entitled "<b>Identification of loci conferring resistance to four foliar diseases of maize</b>". In this manuscript we collected data for Goss's wilt for three DRIL populations that are in an Oh7B background in 2018 and 2019. File S1 has the Dunnett’s test showing lines that were statistically significant than Oh7B for each disease in each population. File S2 has the raw phenotypic data. File S3 has the comparison of individual mapping analysis and multivariate mapping analysis for multiple diseases across multiple populations. File S4 contains the genotypic data used for QTL mapping and joint linkage mapping.<br>