cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.26195/sx0b-kz04
title: Understanding Wikipedia in Australia

description: We examine the relationship between Wikipedia and the Order of Australia to understand who is recognised. It’s important to note that both systems have been criticised for their bias against minorities and under-recognised groups. A 1995 review into the Australian Honours system outlined significant failings of the awards because of its gender and racial biases. We estimate that there are 53,569 pages in Wikipedia that relate to people connected to Australia, compared to 41,330 people who hold an Order of Australia. Notability on each platform is measured in a different way. The Order receives public nominations but convenes a panel of representatives to judge a person’s merit based on service or contribution. While the Order of Australia focuses on those who have rendered service to the nation, Wikipedia has a wider latitude to also include people who operate more on the fringe - indeed, it even includes some Australians who have had their Order removed because of a criminal conviction.
While each system has a different system for measuring “notability”, we were interested in how much overlap exists between the two. What we have found is that this overlap is relatively small. There are 4,452 people who have both a Wikipedia page and hold an Order of Australia. Only 11% of all Order recipients have a Wikipedia biography. Given that Wikipedia page creation relies on external forms of verification, we set out to explore this relationship in more depth.
DOI: 10.6084/m9.figshare.13848026.v1
title: 2020JG005810RRR_Olid_et_al_2021JGRB

description: Data used for the Ms ""The role of methane transport from the active layer in sustaining methane emissions and food chains in subarctic ponds"
DOI: 10.6084/m9.figshare.13848026
title: 2020JG005810RRR_Olid_et_al_2021JGRB

description: Data used for the Ms ""The role of methane transport from the active layer in sustaining methane emissions and food chains in subarctic ponds"
DOI: 10.5281/zenodo.4524537
title: Raw data for manuscript: A biosensor for direct visualisation of auxin

description: <strong>Raw data ressources for Herud et al, 2021</strong> Summary of the work see the text at the end of this section. For details on imaging Methods see the corresponding publication. All underlying raw data presented in this work is deposited here except: 1) the FACS data which is sepeartedly uploaded in "FlowRepository.org" under identifier "FR-FCM-Z3FL" 2) the structural data which is deposited with the pdb under indetifiers: 6EJW, 6EJZ, 6ENI, 6EKP, 6ENN, 6ELB, 6ELF, 6ELG <strong>For deposition at zenodo.org 3 archive files have been generated and are accessible here:</strong> 1) "Herud_et_al_2021__figures_3_and_4_raw_data__v1.zip" containing the following folders: a) "figure_3c-d__DMSO_control" b) "figure_3c-d__import _IAA_1h" c) "figure_3e-f__import _AA_10_min" d) "figure_3g-h__export_10min_pre_wash_out" e) "figure_3g-h__export_1h_pre_wash_out" f) "figure_3i-j__ER" g) "figure_4a-b__BFA" h) "figure_4c-d__gravitropism" 2) "Herud_et_al_2021__suppl_figures_S1_S3-S5_S7_and_table_S2_raw_data__v1.zip" containing the following folders: a) "figure_S1__variants" b) "figure_S3a-c__FRET" c) "figure_S3e-j__linker" d) "figure_S4a__pH" e) "figure_S4b__agents" f) "figure_S4c__pH_ITC" g) "figure_S5__compounds" h) "figure_S8__PIN" i) "table_S2__variants_ITC" 3) "Herud_et_al_2021__ImageJ_analysis_macros__v1.zip" containing the following files: a) "AuxSen_GUI_v-1-0.ijm" b) "analysis_ER_201123.ijm" <strong>Work Summary:</strong> In plants, one of the most important regulative small molecules is the auxin indole-3-acetic acid (IAA). Its dynamic redistribution plays an essential role in virtually every aspect of plant life, ranging from cell shape and division to organogenesis and to responses to light and gravity . So far, the spatial and temporal distribution of auxin at cellular resolution could not be determined directly. Instead it has been inferred from the visualisation of irreversible processes involving the endogenous auxin response machinery . This detection system fails to record transient changes. Here we report on a genetically encoded biosensor for quantitative in vivo visualisation of auxin distributions. The sensor is based on the E. coli tryptophan repressor (TrpR) whose binding pocket was engineered to be specific to IAA. The sensor employs FRET as readout after coupled to optimally selected fluorescent proteins. This sensor, unlike previous systems, enables direct monitoring of fast uptake and clearance of auxin by individual cells and within cell compartments in planta, responding to the graded spatial distribution along the root axis and its perturbation by transport inhibitors as well as the rapid and reversible redistribution of endogenous auxin in response to changes in gravity vectors. Thus, our auxin sensor enables real-time monitoring of auxin concentrations at a (sub)cellular resolution and their changes in time and space during a plant ́s entire life.
DOI: 10.5281/zenodo.4524536
title: Raw data for manuscript: A biosensor for direct visualisation of auxin

description: <strong>Raw data ressources for Herud et al, 2021</strong> Summary of the work see the text at the end of this section. For details on imaging Methods see the corresponding publication. All underlying raw data presented in this work is deposited here except: 1) the FACS data which is sepeartedly uploaded in "FlowRepository.org" under identifier "FR-FCM-Z3FL" 2) the structural data which is deposited with the pdb under indetifiers: 6EJW, 6EJZ, 6ENI, 6EKP, 6ENN, 6ELB, 6ELF, 6ELG <strong>For deposition at zenodo.org 3 archive files have been generated and are accessible here:</strong> 1) "Herud_et_al_2021__figures_3_and_4_raw_data__v1.zip" containing the following folders: a) "figure_3c-d__DMSO_control" b) "figure_3c-d__import _IAA_1h" c) "figure_3e-f__import _AA_10_min" d) "figure_3g-h__export_10min_pre_wash_out" e) "figure_3g-h__export_1h_pre_wash_out" f) "figure_3i-j__ER" g) "figure_4a-b__BFA" h) "figure_4c-d__gravitropism" 2) "Herud_et_al_2021__suppl_figures_S1_S3-S5_S7_and_table_S2_raw_data__v1.zip" containing the following folders: a) "figure_S1__variants" b) "figure_S3a-c__FRET" c) "figure_S3e-j__linker" d) "figure_S4a__pH" e) "figure_S4b__agents" f) "figure_S4c__pH_ITC" g) "figure_S5__compounds" h) "figure_S8__PIN" i) "table_S2__variants_ITC" 3) "Herud_et_al_2021__ImageJ_analysis_macros__v1.zip" containing the following files: a) "AuxSen_GUI_v-1-0.ijm" b) "analysis_ER_201123.ijm" <strong>Work Summary:</strong> In plants, one of the most important regulative small molecules is the auxin indole-3-acetic acid (IAA). Its dynamic redistribution plays an essential role in virtually every aspect of plant life, ranging from cell shape and division to organogenesis and to responses to light and gravity . So far, the spatial and temporal distribution of auxin at cellular resolution could not be determined directly. Instead it has been inferred from the visualisation of irreversible processes involving the endogenous auxin response machinery . This detection system fails to record transient changes. Here we report on a genetically encoded biosensor for quantitative in vivo visualisation of auxin distributions. The sensor is based on the E. coli tryptophan repressor (TrpR) whose binding pocket was engineered to be specific to IAA. The sensor employs FRET as readout after coupled to optimally selected fluorescent proteins. This sensor, unlike previous systems, enables direct monitoring of fast uptake and clearance of auxin by individual cells and within cell compartments in planta, responding to the graded spatial distribution along the root axis and its perturbation by transport inhibitors as well as the rapid and reversible redistribution of endogenous auxin in response to changes in gravity vectors. Thus, our auxin sensor enables real-time monitoring of auxin concentrations at a (sub)cellular resolution and their changes in time and space during a plant ́s entire life.
DOI: 10.25502/eh9k-p507/d
title: Banana aphid Pentalonia nigronervosa Coquerel (Hemiptera: Aphididae) and ant interaction 

description: Banana and plantain (Musa spp) contribute to food security for about 70 million people in Africa and in Cameroon where it serves as source of income and food security. Nevertheless, Banana bunchy top virus (BBTV) transmitted by the banana aphid Pentalonia nigronervosa Coquerel is a serious threat to the production of bananas. An integrated management BBTV requires a good knowledge of aphid biology and ecology. Banana aphid has trophobiotic relationship with many species of ants, of the genus Pheidole. The present study aims at understanding the role of ants in the survival and the dynamic of aphid. To assess this, Pentalonia nigronervosa was infested on young banana plants in the presence or absence of ants and kept with/without protection against aphid predators. The assessment of aphid population was done for ten weeks. The present study provides useful information for the understanding of the existing trophobiotic relationship between banana aphid and ant in the genus Pheidole sp. This would help to design an integrated management of BBTV notably through the biological control of the vector.
DOI: 10.6084/m9.figshare.13773949
title: Exploring the Impact of COVID-19 on Maternity Care, Pregnancy and Coping

description: Data: The study assessed the impact of COVID-19 mitigation efforts on maternity care and antenatal depression. Sample: 188 participants from a community sample answered an online survey. Results: Prevalence rates of antenatal depression in Australia were found to be higher during the pandemic compared to Australian pre pandemic prevalence rates. Pregnant women were ‘a little to moderately’ concerned both overall and in relation to having their baby. More than half of the women reported changes to their pregnancy healthcare. Conclusion: Increased vigilance with screening and assessment will be required to identify and support this cohort of mothers who are not coping.
DOI: 10.6084/m9.figshare.13773949.v1
title: Exploring the Impact of COVID-19 on Maternity Care, Pregnancy and Coping

description: Data: The study assessed the impact of COVID-19 mitigation efforts on maternity care and antenatal depression. Sample: 188 participants from a community sample answered an online survey. Results: Prevalence rates of antenatal depression in Australia were found to be higher during the pandemic compared to Australian pre pandemic prevalence rates. Pregnant women were ‘a little to moderately’ concerned both overall and in relation to having their baby. More than half of the women reported changes to their pregnancy healthcare. Conclusion: Increased vigilance with screening and assessment will be required to identify and support this cohort of mothers who are not coping.
DOI: 10.5281/zenodo.4528960
title: Dataset related to "Comprehensive Phenotyping of Dendritic Cells in Cancer Patients by Flow Cytometry"

description: This record contains data related to article “Comprehensive Phenotyping of Dendritic Cells in Cancer Patients by Flow Cytometry" Dendritic cells (DCs) play a crucial role in the complex interplay between tumor cells and the immune system. During the elimination phase of cancer immunoediting, immunostimulatory DCs are critical for the control of tumor growth. During the escape phase, regulatory DCs sustain tumor tolerance and contribute to the development of the immunosuppressive tumor microenvironment that characterizes this phase. Moreover, increasing evidence indicates that DCs are also critical for the success of cancer immunotherapy. Hence, there is increasing need to fully characterize DC subsets and their activatory/inhibitory profile in cancer patients. In this review, we describe the role played by different DC subsets in the different phases of cancer immunoediting, the function exerted by different activatory and inhibitory molecules expressed on DC surface, and the cytokines produced by distinct DC subsets, in order to provide an overview on the DC features that may be useful to be assessed when dealing with the flow cytometric characterization of DCs in cancer patients. Note: files in uploaded dataset are in ".fcs" format. the following softwares are able to open them: FlowJo, BD FACSDiva.
DOI: 10.5281/zenodo.4524951
title: Dataset related to "Comprehensive Phenotyping of Dendritic Cells in Cancer Patients by Flow Cytometry"

description: This record contains data related to article “Comprehensive Phenotyping of Dendritic Cells in Cancer Patients by Flow Cytometry" Dendritic cells (DCs) play a crucial role in the complex interplay between tumor cells and the immune system. During the elimination phase of cancer immunoediting, immunostimulatory DCs are critical for the control of tumor growth. During the escape phase, regulatory DCs sustain tumor tolerance and contribute to the development of the immunosuppressive tumor microenvironment that characterizes this phase. Moreover, increasing evidence indicates that DCs are also critical for the success of cancer immunotherapy. Hence, there is increasing need to fully characterize DC subsets and their activatory/inhibitory profile in cancer patients. In this review, we describe the role played by different DC subsets in the different phases of cancer immunoediting, the function exerted by different activatory and inhibitory molecules expressed on DC surface, and the cytokines produced by distinct DC subsets, in order to provide an overview on the DC features that may be useful to be assessed when dealing with the flow cytometric characterization of DCs in cancer patients. Note: files in uploaded dataset are in ".fcs" format. the following softwares are able to open them: FlowJo, BD FACSDiva.
DOI: 10.21942/uva.13285685.v3
title: Data set belonging to Pouwels et al. (2021). Social media use and friendship closeness in adolescents’ daily lives: An experience sampling study

description: This data set belongs to:<br>Pouwels, J. L., Valkenburg, P. M., Beyens, I., van Driel, I. I., & Keijsers, L. (2021). Social media use and friendship closeness in adolescents’ daily lives: An experience sampling study. <i>Developmental Psychology, 57(2), </i>309-323. http://dx.doi.org/10.1037/dev0001148<br><br>The preregistration of the design, sampling and analysis plan of the study, as well as all syntax files and online supplemental materials are available on the Open Science Framework (OSF) at https://osf.io/evsjd/.<br><br>For more information, please contact the authors at j.l.pouwels@uva.nl or info@project-awesome.nl.<br>
DOI: 10.21942/uva.13285685
title: Data set belonging to Pouwels et al. (2021). Social media use and friendship closeness in adolescents’ daily lives: An experience sampling study

description: This data set belongs to:<br>Pouwels, J. L., Valkenburg, P. M., Beyens, I., van Driel, I. I., & Keijsers, L. (2021). Social media use and friendship closeness in adolescents’ daily lives: An experience sampling study. <i>Developmental Psychology, 57(2), </i>309-323. http://dx.doi.org/10.1037/dev0001148<br><br>The preregistration of the design, sampling and analysis plan of the study, as well as all syntax files and online supplemental materials are available on the Open Science Framework (OSF) at https://osf.io/evsjd/.<br><br>For more information, please contact the authors at j.l.pouwels@uva.nl or info@project-awesome.nl.<br>
DOI: 10.48370/ofd/mvov8u
title: Organizacja zielnika Instytut Nauk Leśnych

description: Zielnik w swej obecnej postaci powstał w 1986 roku i rozbudowywany był w następnych latach z myślą o udokumentowaniu całości flory Puszczy Białowieskiej i jej zachodniego przedpola. Z czasem, w wyniku realizacji różnych projektów badawczych i wypraw botanicznych, sukcesywnie powiększano herbarium o okazy z innych części kraju i z zagranicy. Okazy zielnikowe umieszczone są na białych kartach papieru o wymiarach 27x42 cm. Zasuszone rośliny przytwierdzone są do kart paskami papieru metodą Archera. W prawym górnym rogu karta jest opieczętowana numerem kolejnym karty zielnikowej. Każda karta zawiera również wygenerowaną z programu etykietę zielnikową wraz z kodem QR. Nasiona i owoce umieszczone są w składanych papierowych kopertkach i przytwierdzone na stałe klejem do arkusza. Każdy gatunek umieszczony jest oddzielnie w kartonowej składanej dwoma skrzydełkami teczce z pieczęcią zielnika i kolejnym numerem teczki.
DOI: 10.5281/zenodo.4522359
title: All-atom Phospholipid membranes of various sizes and compositions

description: <strong>Publication:</strong> Ripple-like instability in the simulated gel phase of finite size phosphocholine bilayers <strong>Published on:</strong> <em>To be published</em> <strong>Journal</strong>: <em>To be submitted</em> <strong>Description</strong>: Simulation files of different lipid bilayer made either of DPPC, DPPE or DSPC. Different number of lipids per bilayers are provided (given in the name of the file). The average number of water molecules per lipid is circa 160 water molecules per lipid. Complete simulations are provided for two of the systems <strong>Simulation details:</strong> Software: Gromacs (v. 2016.4) Forcefield: Charmm36 (v. June 2015) - Water: TIP3P Thermostat: Nose-hoover (0.4ps, 2 groups) Barostat: Parrinello-Rahman semi-isotropic (2.0ps, 1.0 bar on each axis, 4.5e-5 bar-1) Duration: 50 ns
DOI: 10.5281/zenodo.4522358
title: All-atom Phospholipid membranes of various sizes and compositions

description: <strong>Publication:</strong> Ripple-like instability in the simulated gel phase of finite size phosphocholine bilayers <strong>Published on:</strong> <em>To be published</em> <strong>Journal</strong>: <em>To be submitted</em> <strong>Description</strong>: Simulation files of different lipid bilayer made either of DPPC, DPPE or DSPC. Different number of lipids per bilayers are provided (given in the name of the file). The average number of water molecules per lipid is circa 160 water molecules per lipid. Complete simulations are provided for two of the systems <strong>Simulation details:</strong> Software: Gromacs (v. 2016.4) Forcefield: Charmm36 (v. June 2015) - Water: TIP3P Thermostat: Nose-hoover (0.4ps, 2 groups) Barostat: Parrinello-Rahman semi-isotropic (2.0ps, 1.0 bar on each axis, 4.5e-5 bar-1) Duration: 50 ns
DOI: 10.5281/zenodo.4524786
title: Learning How to Search: Generating Effective Test Cases Through Adaptive Fitness Function Selection

description: Data Package for "Learning How to Search: Generating Effective Test Cases Through Adaptive Fitness Function Selection" This package contains data generated as part of our experiments on adaptive fitness function selection as part of unit test generation for Java systems. This paper is currently under submission. A draft of the paper is included in the data package. This package contains experimental data (in folder "experiment_data"), including goal attainment, fault detection, time per generation, and choices made by the reinforcement learning algorithm. In the folder "test_suites", the suites generated by each technique are included for each project. If you have questions, please contact Gregory Gay at greg@greggay.com. NOTE: A small number of items are currently missing from this data package and will be added shortly. Please make sure you have the latest version of this package.
description: This research was supported by Vetenskapsrådet grant 2019-05275.
DOI: 10.6084/m9.figshare.13708208
title: Experimental data from Carrier and dilution effects of CO<sub>2</sub> on thoron emissions from a zeolitized tuff exposed to subvolcanic temperatures

description: Thoron data from thermal and CO2 flux experiments conducted at subvolcanic temperatures from 170 to 450 °C
DOI: 10.6084/m9.figshare.13708208.v1
title: Experimental data from Carrier and dilution effects of CO<sub>2</sub> on thoron emissions from a zeolitized tuff exposed to subvolcanic temperatures

description: Thoron data from thermal and CO2 flux experiments conducted at subvolcanic temperatures from 170 to 450 °C
DOI: 10.5281/zenodo.4528976
title: Data set from Caruso R, Rebora P, Luciani M, Di Mauro S, Ausili D. Sex-related differences in self-care behaviors of adults with type 2 diabetes mellitus. Endocrine. 2020 Feb;67(2):354-362. doi: 10.1007/s12020-020-02189-5. Epub 2020 Jan 11. PMID: 31927750.

description: Data set from the article Caruso R, Rebora P, Luciani M, Di Mauro S, Ausili D. Sex-related differences in self-care behaviors of adults with type 2 diabetes mellitus. Endocrine. 2020 Feb;67(2):354-362. doi: 10.1007/s12020-020-02189-5. Epub 2020 Jan 11. PMID: 31927750. <em><strong>Abstract</strong></em> <strong>Purpose: </strong>To describe sex-related differences in self-care; to identify determinants of self-care according to sex, and to investigate how sex interacts with the effect of clinical and socio-demographic variables on self-care in adults with Type 2 Diabetes Mellitus (T2DM). <strong>Methods: </strong>Cross-sectional multicentre study with a consecutive sampling recruitment strategy, enrolling 540 adults with T2DM at six outpatient diabetes services. Clinical and socio-demographic variables were collected by medical records. Self-care maintenance, monitoring, management, and confidence were measured by the self-care of diabetes inventory. <strong>Results: </strong>Females reported higher disease prevention behaviors (P &lt; 0.001), health-promoting behaviors (P &lt; 0.001), body listening (P &lt; 0.001), and symptom recognition (P = 0.010), but lower health-promoting exercise behaviors (P &lt; 0.001). Determinants of self-care were different in male and female patients, where the role of task-specific self-care confidence predicted self-care monitoring (RR = 0.98; P &lt; 0.001) and management (RR = 0.99; P &lt; 0.001) among males, while persistence self-care confidence predicted self-care maintenance (RR = 0.97; P = 0.016) and management (RR = 0.99; P = 0.009) among females. <strong>Conclusions: </strong>Males and females differently perform self-care. Self-care confidence plays a different role predicting self-care behaviors in males and females. Future research should longitudinally describe self-care and its determinants in males and females with T2DM. Sex-specific self-care confidence interventions should be developed to improve self-care in male and female patients with T2DM.