cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18460990
title: DNA Methylation Related Results associated with manuscript titled "Endurance exercise elicits cell-type-specific epigenetic and transcriptional remodeling across skeletal muscles"

description: These result files are associated with the DNA methylation analysis associated with the manuscript titled "Endurance exercise elicits cell-type-specific epigenetic and transcriptional remodeling across skeletal muscles."

Authors:

Manoj Hariharan1a, Ramesh K. Ramasamy1a, Geraldine Maier1b, Sahil Patel1b, Vince Rothenberg1b, Yue Wu1, Rosa Castanon1, Anna Bartlett1, Joseph Nery1, Huaming Chen1, Cesar Barragan1, Michael Lam1, Laura van Rosmalen1, Shaunak Deota1, Krushali Powale1, Terry Lin1, Satchidananda Panda1, Joseph R. Ecker1,2

1.     The Salk Institute for Biological Studies, 10010 North Torrey Pines Road, La Jolla, CA 92037, USA

2.     Howard Hughes Medical Institute, The Salk Institute for Biological Studies, 10010 North Torrey Pines Road, La Jolla, CA 92037, USA

a. These authors contributed equally to this work

b. These authors contributed equally to this work

Contact information: ecker@salk.edu (Joseph R. Ecker), panda@salk.edu (Satchidananda Panda)
DOI: 10.5281/zenodo.18460991
title: DNA Methylation Related Results associated with manuscript titled "Endurance exercise elicits cell-type-specific epigenetic and transcriptional remodeling across skeletal muscles"

description: These result files are associated with the DNA methylation analysis associated with the manuscript titled "Endurance exercise elicits cell-type-specific epigenetic and transcriptional remodeling across skeletal muscles."

Authors:

Manoj Hariharan1a, Ramesh K. Ramasamy1a, Geraldine Maier1b, Sahil Patel1b, Vince Rothenberg1b, Yue Wu1, Rosa Castanon1, Anna Bartlett1, Joseph Nery1, Huaming Chen1, Cesar Barragan1, Michael Lam1, Laura van Rosmalen1, Shaunak Deota1, Krushali Powale1, Terry Lin1, Satchidananda Panda1, Joseph R. Ecker1,2

1.     The Salk Institute for Biological Studies, 10010 North Torrey Pines Road, La Jolla, CA 92037, USA

2.     Howard Hughes Medical Institute, The Salk Institute for Biological Studies, 10010 North Torrey Pines Road, La Jolla, CA 92037, USA

a. These authors contributed equally to this work

b. These authors contributed equally to this work

Contact information: ecker@salk.edu (Joseph R. Ecker), panda@salk.edu (Satchidananda Panda)
DOI: 10.15468/dl.uyhjce
title: Occurrence Download

description: A dataset containing 262481 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-5000.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Episyrphus balteatus",
 "Year 2000-2026"
 ]
}

 The dataset includes 262481 records from 437 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010123-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9vdc9p
title: Occurrence Download

description: A dataset containing 745 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vernonanthura liatroides"
 ]
}

 The dataset includes 745 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010157-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t4y8zs
title: Occurrence Download

description: A dataset containing 7718 species occurrences available in GBIF matching the query:
{
 "and" : [
 "License is CC0 1.0",
 "OccurrenceStatus is Present",
 "TaxonKey is Crotalus atrox"
 ]
}

 The dataset includes 7718 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010158-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.48u7pn
title: Occurrence Download

description: A dataset containing 2392 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trifolium resupinatum, Trifolium resupinatum, Trifolium resupinatum)",
 "Year is greater than or equal to 1900",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 2392 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010159-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8arzvk
title: Occurrence Download

description: A dataset containing 219487 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilus edulis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 219487 records from 525 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010103-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9d7z8g
title: Occurrence Download

description: A dataset containing 288 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Peromyscus polionotus phasma"
 ]
}

 The dataset includes 288 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080333-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mxgnzm
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Abramis brama",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1825",
 "Year is less than or equal to 1829"
 ]
}

 The dataset includes 11 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080332-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1210419.10fu
title: SH1210419.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1210425.10fu
title: SH1210425.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1210427.10fu
title: SH1210427.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1210431.10fu
title: SH1210431.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1210437.10fu
title: SH1210437.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1210440.10fu
title: SH1210440.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1210447.10fu
title: SH1210447.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1210450.10fu
title: SH1210450.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1210454.10fu
title: SH1210454.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1210455.10fu
title: SH1210455.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3886/icpsr37480.v1
title: Survey of Consumer Attitudes and Behavior, April 2015
title: Version 1

description: The Survey of Consumer Attitudes and Behavior series (also known as the Surveys of Consumers) was undertaken to measure changes in consumer attitudes and expectations, to understand why such changes occur, and to evaluate how they relate to consumer decisions to save, borrow, or make discretionary purchases. The data regularly include the Index of Consumer Sentiment, the Index of Current Economic Conditions, and the Index of Consumer Expectations. Since the 1940s, these surveys have been produced quarterly through 1977 and monthly thereafter. 
 The surveys conducted in 2015 focused on topics such as evaluations and expectations about personal finances, employment, price changes, and the national business situation. Opinions were collected regarding respondents' appraisals of present market conditions for purchasing houses, automobiles, computers, and other durables. Also explored in this survey, were respondents' type of savings and financial investments, loan use, family income, and retirement planning. 
 Other topics in this series typically include ownership, leases and use of automobiles, environmental perceptions, and health care. Demographic information includes ethnic origin, sex, age, marital status, and education.
description: The purpose of this survey series is to forecast changes in aggregate consumer behavior.
description: This survey is a rotating panel design. For each monthly sample, an independent cross-section sample of households is drawn. The respondents chosen in this drawing are then reinterviewed six months later. The result is a rotating panel design, and the total sample for any one survey is normally made up of 60 percent new respondents with 40 percent being interviewed for the second time.
description: The data are not weighted, however, this collection contains four weight variables; WT (HOUSEHOLD HEAD WEIGHT), WT_HH (HOUSEHOLD WEIGHT), and WT_AD (ADULT WEIGHT) that must be used in any analysis. For more information on weights and sampling, please refer to the documentation and/or visit the Survey of Consumers Website.
description: National sample of dwelling units selected by area probability sampling.
description: Datasets: 
DS0: Study-Level Files
DS1: Public-Use Data
DS2: Restricted-Use Data
description: Persons aged 18 years or older living in households with telephones within coterminous United States. Smallest Geographic Unit: FIPS Code
description: computer-assisted telephone interview (CATI)Information on the Index of Consumer Sentiment, the Index of Current Economic Conditions, and the Index of Consumer Expectations and how they were created can be found in the P.I. Codebook.Additional information on the Survey of Consumers can be found by visiting the Survey of Consumers Website.
DOI: 10.15468/dl.znzdg4
title: Occurrence Download

description: A dataset containing 497 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen)",
 "TaxonKey is Hedychium gardnerianum Sheph. ex Ker Gawl."
 ]
}

 The dataset includes 497 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0249042-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112037762
title: Cuneiform Tablet 1913.14.1690, Spurlock 1913.14.1690

description: [Text Description:] Delivery of barley ❧ [Text or Publication Number Note:] Spurlock 1913.14.1690; CDLI P421541 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish White (10YR 9/1.5) ❧ [Physical Object Note:] 3.8 x 2.8 x 1.5 cm (15 g)
DOI: 10.15468/dl.5jmeky
title: Occurrence Download

description: A dataset containing 545 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Picea smithiana (Wall.) Boiss."
 ]
}

 The dataset includes 545 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174261-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qajtsa
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lates mariae Steindachner, 1909"
 ]
}

 The dataset includes 31 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0295357-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tnu9uk
title: Occurrence Download

description: A dataset containing 350295 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Charophyta"
 ]
}

 The dataset includes 350295 records from 971 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0256257-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc112031836
title: Cuneiform Tablet 1913.14.1532, Spurlock 1913.14.1532

description: [Text Description:] Document regarding a free citizenship ❧ [Text or Publication Number Note:] Spurlock 1913.14.1532; CDLI P421384 ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Yellowish Gray (2.5Y 8/2) -body Dark Gray (N 2.75/ 5.5% R) -discolorations ❧ [Physical Object Note:] 5.9 x 4.4 x 2 cm (54 g)
DOI: 10.15468/dl.57hncy
title: Occurrence Download

description: A dataset containing 1134 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhynchopsitta pachyrhyncha (Swainson, 1827)"
 ]
}

 The dataset includes 1134 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0121142-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.