cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.923555.v20
title: The Pediatric Template of Brain Perfusion (PTBP)

description: Magnetic resonance imaging (MRI) captures the dynamics of brain development with high spatial resolu- tion and with complementary modalities that quantify both brain structure and function. These measurements may yield valuable insights into the neural patterns that mark healthy maturation or that identify early risk for psychiatric disorder later in life. The Pediatric Template of Brain Perfusion (PTBP) is a free and public neuroimaging resource that will help accelerate the understanding of childhood brain development as seen through the lens of multiple modality neuroimaging and in relation to cognitive and environmental factors. The PTBP uses MRI to quantify cortex (T1), white matter (DTI), resting state functional connectivity (BOLD) and brain perfusion, as measured by Arterial Spin Labeling (ASL), in &gt;100 children 7—17 years of age. The PTBP captures, within normally developing children and across several modalities, the trajectories that demarcate critical turning points in brain maturation. This novel resource allows a more detailed understanding of the structural and functional landmarks that are obtained during normal adolescent brain development. The full raw nifti dataset is available at the link below. The file jjperf.Rnw is the original knitr version of the article - no guarantee to compile "out of the box" nor to be consistent with the official final version of the manuscript which underwent revision outside of the knitr world. There are also several typos in this version. The PTBP was supported by Danny JJ Wang's R01MH080892 funded by NIMH. The article is in press.
DOI: 10.17632/42mhy98msc
title: Dataset Party Ideology and Public Spending - 16 CEE countries

description: This dataset contains data for 16 countries of Central and Eastern Europe, in 6 categories: -public spending (total and specific for 4 distinctive categories: social transfers, environment, public safety, and education) -ruling party ideology (left-right scale) -economic variables (GDP growth, unemployment, IMF, public debt, etc) -political variables (coalition type & size, electoral system, electoral cycles etc) -demography (share of population under 15 and over 65) -contextual (EU and international integration, corruption perceptions, openness of the economy, conflict legacy, etc). Period: 1990-2017 Countries: Poland, Czech Republic, Slovakia, Hungary, Estonia, Latvia, Lithuania, Bulgaria, Romania, Moldova, Serbia, Croatia, Slovenia, Albania, Montenegro, (North) Macedonia.
DOI: 10.17632/bx2xwd9gsh
title: Optical coherence tomography image dataset of genuine and faux leather

description: We have recorded Optical Coherence Tomography (OCT) images of both genuine and faux leather samples. The genuine leather samples comprised leather from small and large ruminants. The data is organized into three folders: FauxLeatherSamples, LargeRuminantSamples, and SmallRuminantSamples, each containing 5 distinct samples. Therefore, a total of 15 different samples (5 small ruminants, 5 large ruminants, and 5 artificial/faux leathers) were scanned at different points on their surfaces. Under the FauxLeatherSamples folder, OCT images corresponding to the 5 separate artificial leather samples are stored. To ensure approximate consistency in the data from the samples, the OCT scans were fixed to 2 mm from each image and saved in the same PNG format. We are making this labeled OCT leather type dataset publicly available. The dataset consists of raw OCT images stored in 15 separate folders, all in the same format. Each folder contains only OCT scans taken randomly over a single genuine or faux leather sample. The OCT scans corresponding to the genuine leather samples are found under the folders named LargeRuminantSamples and SmallRuminantSamples. Furthermore, under these folders, subfolders labeled 1 to 5 contain OCT scans of five different leathers, all of which are genuine. The scans are raw OCT-B image files, captured using ThorImage software on the Thorlabs OCT imaging system. No additional image processing or filtering has been performed on the raw OCT images. Each OCT scan is a separate image with the date and time of the scan stamped within the file name. For instance, under the folder LargeRuminantSamples, within Folder 1, there are OCT scans of the genuine leather sample 1, originating from a large ruminant leather piece. The file named "OCT Image 060315_12242021.png" in this folder corresponds to the OCT scan of the first leather sample taken on December 24, 2021, at 06:03:15.
DOI: 10.17632/hr65t4zzkv
title: A comprehensive human gastric cancer organoid biobank captures tumor subtype heterogeneity and enables therapeutic screening. Yan HHN et al. Mendeley Dataset 17

description: Dose response of gastric cancer organoids with and without ARD1A mutation to treatment with ATR inhibitor VE-821
DOI: 10.17632/mcvdvvs43x
title: Vocalization associated respiration patterns: thermography-based monitoring and a potential for detecting preparation for calling 

description: Sample data and script for detecting respiration cycles and phases based on continuous temperature reading of the nasal area.
DOI: 10.17632/y4pb8gdf8m
title: Data for: Mesoproterozoic paleo-redox changes during 1500-1400 Ma in the Yanshan Basin, North China

description: Fe species and trace metal (Mo, U) concentrations of the J1 and J2 drill core samples from the Yanshan Basin.
DOI: 10.17632/433nd5fhts
title: Infertility in Ghana

description: It has the following objectives: to identify the categories of people utilizing low tech, medical herbalists and high tech fertility treatments, to understand the motivations behind their treatment seeking, to understand what determines their treatment choice as well as the contestations that exist between couples and other actors over treatment choices and how they are resolved. In addition, the study explored the processes that respondents follow in seeking treatment and reported on the social, religious and cultural context surrounding the use of ARTs as evidenced in respondents’ ways of navigating around components of ART treatment.
The respondents for the study were purposively selected from three sites namely a private herbal clinic, a government hospital and a private orthodox fertility clinic which utilises Assisted Reproductive Technologies (i.e. IVF, ICSI etc). These clinics are located in the capital, Accra. Based on qualitative in-depth interview data obtained through convenience sampling of 45 respondents and nine key informants, the study noted the following: infertile men and women continue to desire to become biological parents based on both societal considerations and personal desires. Specifically, factors such as marital security, children as social security and for purposes of inheritance and social status were at play. In addition, although the health seeking behaviour of respondents was influenced by both kin and non-kin actors, some respondents showed a degree of autonomy in the final decision taken regarding treatment. Explanations provided for the cause of infertility by both respondents and their friends and relatives led them to seek treatment from either the biomedical or spiritual healer. However, where such treatment options were unfavourable and/or did not achieve the desired results, some respondents moved from herbal treatment to orthodox treatment and vice versa. In addition, they intensified their efforts at obtaining healing by complementing biomedical healing with spiritual healing. Finally, respondents accessing ART treatment were found to select aspects of the treatment procedure that created the least forms of dissonance for them based on socio-cultural, religious and personal considerations. The use of these technologies were not seen as conflicting with religious beliefs as in most cases, respondents drew on religion to explain treatment successes and failures.
The study therefore recommends, amongst other things, that medical herbalism should be developed due to the continued reliance on herbal treatment. Some infertility treatments should also be considered for incorporation into the National Health Insurance scheme to improve access and reduce the burden of infertility. People also need to be well informed about treatment options while reducing the negative effects of media advertising.
DOI: 10.6084/m9.figshare.4724671.v1
title: CIFAR10-DVS_New

description: This folder contains the neuromorphic vision dataset named as 'CIFAR10-DVS' obtained by displaying the moving images of the CIFAR-10 dataset(http://www.cs.toronto.edu/~kriz/cifar.html) on a LCD monitor. The dataset is used for event-driven scene classification and pattern recognition. These recordings can be displayed using the jAER software (http://sourceforge.net/p/jaer/wiki/Home) using filters DVS128.The files "dat2mat.m" and "mat2dat.m" in (http://www2.imse-cnm.csic.es/caviar/MNIST_DVS/) can be used to transfer lists of events between jAER format (.dat or .aedat) and matlab.<br>The high-sensitivity DVS used in our recording system reported in:P. Lichtsteiner, C. Posch, and T. Delbruck, “A 128×128 120 dB 15 μs latency asynchronous temporal contrast vision sensor,” IEEE J. Solid-State Circuits, vol. 43, no. 2, pp. 566–576, Feb. 2008<br>A single 128x128 pixel DVS sensor was placed in front of a 24" LCD monitor. Images of CIFAR-10 were upscaled to 512 * 512 through bicubic interpolation, and displayed on the LCD monitor with circulating smooth movement. A total of 10,000 event-stream recordings in 10 classes(airplane, automobile, bird, cat, deer, dog, frog, horse, ship, truck) with 1000 recordings per classes were obtained. <br>
DOI: 10.17632/b47j739jb7
title: Chemogenetic activation of target neurons expressing insect Ionotropic Receptors in the central nervous system by systemic administration of ligand precursors

description: Ionotropic Receptors (IRs) in the insect chemosensory system form a variant subfamily belonging to ionotropic glutamate receptors. The IRs-mediated neuronal activation (IRNA) technology allows stimulation of the neurons expressing the receptor in response to specific ligands. In the present study, we developed a strategy for activation of target neurons in the brain through systemic administration with precursors of a specific ligand phenylacetic acid (PhAc) against the complex consisting of IR84a and IR8a subunits. Peripheral administration with methyl ester of PhAc (PhAcM) activated IR84a/IR8a-expressing neurons in the brain of mice and increases the release of neurotransmitters in their nerve terminal regions. (S)-phenylpropionic acid ((S)-PhPr) was newly identified as an IR84a/IR8a ligand, and the peripheral administration with methyl ester of PhPr with the S-configuration [(S)-PhPrM] also caused similar effects on the target neurons. These precursors seemed to be transferred into the brain across the blood-brain barrier, and converted to mature ligands by esterase activity. In addition, cell-type specific expression of IR84a/IR8a complex in the striatum of rats was unilaterally induced with a viral vector based on the Cre-loxP system. Peripheral administration with PhAcM or (S)-PhPrM stimulated the neurotransmitter release in the ipsilateral terminal regions of the vector-injected striatum, and the PhAcM administration resulted in rotational behavior. Besides, the metabolites of the peripherally administered-radiolabeled (S)-PhPrM were accumulated in the IR84a/IR8a-expressing region in the striatum of the vector-injected rats. These results demonstrate that the systemic IRNA technique provides a useful strategy for remote manipulation of the target neurons in the central nervous system.
DOI: 10.17632/jv68zhz58s
title: PL022-26 Self-defining memories

description: Contains the datasets for bivariate and multilevel models. Fixes an error in the way specific positive SDMs were determined from SDM Affect and SDM specificity in the old version of the file. Self-defining memories (SDMs), general, and maladaptive personality study. N = 133. SDM variables based on 10 memories per participants obtained via the self-defining memory task. WAI-SF: Weinberger Adjustment Inventory. SNAP: Schedule of Nonadaptive and Adaptive Personality. NEO-FFI: NEO Five-Factor Inventory. Data collected and coded between 2009-2011.
DOI: 10.6084/m9.figshare.29125550.v1
title: Redistributive Effects of South Korea’s Fifth National Pension Reform: Accounting for Inequality in Contribution Periods and Life Expectancy

description: This study evaluates the redistributive consequences of South Korea’s “Fifth National Pension Comprehensive Plan (Draft),” announced in October 2023, by employing a dynamic microsimulation model calibrated to individual-level panel data from the Korean Labor & Income Panel Study (KLIPS).
DOI: 10.6084/m9.figshare.5576923.v1
title: Patterns of GFP fluorescence for viable but non-culturable, persister, susceptible, susceptible not lysed, and untreated controlcells

description: Distribution of GFP fluorescence levels in viable but non-culturable, persister, susceptible, and susceptible not lysed cells in the <i>tolC</i>, <i>tnaC</i> and <i>ptsG</i> reporter strains before (t=0), during (t&lt;3h), and after (t&gt;3h) treatment with ampicillin at a concentration of 25xMIC. GFP fluorescence levels in untreated control cells were obtained in separate experiments where bacteria were provided with LB only, without ampicillin, from t=0 onwards.
DOI: 10.17632/yfwykft355
title: Vehicle Non-exhaust Emissions Significantly Contribute to Urban PM pollution in New Energy Vehicles Era

description: Based on the Tianjin Statistical Yearbook, we obtained the population of small passenger vehicles from 2002 to 2021. Moreover, we employed established methodologies from prior research(Sun et al., 2019) to adopt a trend extrapolation approach for predicting vehicle population from 2022 to 2035. We employed a logistic model to predict the population of new energy vehicles from 2022 to 2035 based on nationwide vehicle population data and Automotive Industry Association statistical data. The population of conventional fuel vehicles was determined by subtracting the population of new energy vehicles from the overall vehicle population.
The VKT is a key foundational data for constructing emission inventory, reflecting the overall activity level of a vehicle fleet. The inspection station database records vehicle age and cumulative mileage, and with appropriate data processing to provide a highly reliable annual average mileage. 
Tianjin PM10 concentration and ADMS model simulation of brake and tire wear PM10 hourly concentration.
DOI: 10.6084/m9.figshare.1030363.v1
title: Fs MD Trajectories

description: This dataset consists of 28 molecular dynamics trajectories of Fs peptide (Ace-A_5(AAARA)_3A-NME), a widely studied model system for protein folding. Each trajectory is 500 ns in length, and saved at a 50 ps time interval (14 us aggegrate sampling). The simulations were performed using the AMBER99SB-ILDN force field with GBSA-OBC implicit solvent at 300K, starting from randomly sampled conformations from an initial 400K unfolding simulation. The simulations were performed with OpenMM 6.0.1.<br><br>The files in this dataset include the 28 trajectories in xtc format, the scripts used setup and run the simulations, and the starting conformations in .pdb format.
DOI: 10.6084/m9.figshare.21901641.v1
title: Traits_data_Koutsidi_2023.xlsx

description: <strong>Sheet “data”: </strong>This dataset includes six traits related to resource exploitation: maximum length, trophic level, diet and feeding type (to describe the use of food resources), spawning period and spawning habitat (to reflect spawning habitat use). Within each trait, 2–5 trait categories/modalities have been created using information on the species biology and preferences coming from the bibliography for each of the 108 species collected. To include within-species heterogeneity and allow for trait plasticity within a population, a species can have non-zero values for more than one modality per trait in the dataset. Each species has been assigned values ranging from 0 to 1 in a fashion that, within each trait, the sum of all modality proportions equals 1. <strong>Sheet “references”:</strong> This worksheet includes one or more numbers representing a reference from which the information to fill in the trait information as data was taken <strong>Sheet “references_list”:</strong> This worksheet is a list of reference numbers and the corresponding full references.
DOI: 10.6084/m9.figshare.29092367.v1
title: Copyright Transfer Form.docx

description: Certificate of Conflict of Interest
DOI: 10.6084/m9.figshare.5657002.v1
title: Additional file 8: of Using variant databases for variant prioritization and to detect erroneous genotype-phenotype associations

description: An r-script containing the “Tv_threshold” function for Tv cut-off calculation and the “flag_probability” function to calculate the probability that variants occur at least with a frequency f in the database, together with practical examples. (R 8 kb)
DOI: 10.17632/5rzybst8y3
title: Behavioral classes dataset of Brazilian adolescents

description: It includes data related to different domains of physical activity and sedentary behavior, common mental disorder, and lifestyle behaviors (e.g., sleep duration and alcohol consumption).
DOI: 10.17632/8t6f3snrtm
title: Migraine in Children: Preventive Pharmacologic Treatments

description: This report is based on research conducted by the Minnesota Evidence-based Practice Center (EPC) under contract to the Agency for Healthcare Research and Quality (AHRQ), Rockville, MD (Contract No. 290-07-10064-I). The findings and conclusions in this document are those of the authors, who are responsible for its contents; the findings and conclusions do not necessarily represent the views of AHRQ. Therefore, no statement in this report should be construed as an official position of AHRQ or of the U.S. Department of Health and Human Services. This document is in the public domain and may be used and reprinted without special permission. Citation of the source is appreciated. Suggested citation: Shamliyan TA, Kane RL, Ramakrishnan R, Taylor FR. Migraine in Children: Preventive Pharmacologic Treatments. Comparative Effectiveness Review No. 108. (Prepared by the University of Minnesota Evidence-based Practice Center under Contract No. 290-2007-10064-I.) AHRQ Publication No. 13-EHC065-EF. Rockville, MD: Agency for Healthcare Research and Quality; June 2013. www.effectivehealthcare.ahrq.gov/reports/final.cfm.
DOI: 10.17632/ccxpzhx9dj
title: Hungarian MLS point clouds of railroad environment and annotated ground truth data

description: These sample LiDAR datasets were collected by the Hungarian State Railways with a Riegl VMX-450 high density mobile mapping system (MMS) mounted on a railroad vehicle. The sensor was capable of recording 1.1 million points / sec with an average 3 dimensional range precision of 3 mm and a maximum threshold of 7 mm. Average positional accuracy was 3 cm with a maximum threshold of 5 cm. The acquired point clouds contain the georeferenced spatial information (3D coordinates) with intensity and RGB data attached to the points. The applied reference system is the Hungarian national spatial reference system, EPSG:23700.

3 datasets with different topographical regions of Hungary were selected:
1) mav_szabadszallas_csengod_665500_162600_665900_163200.laz is a curved rail track segment on flat terrain between the city of Szabadszállás and the town of Csengőd. The selected segment is ca. 600 m long, containing 51.8 million points.
2) mav_sztg_szh_439040_183444_440377_183863.laz is a curved rail track segment with varied terrain and slopes between the cities Szentgotthárd and Szombathely. The selected segment is ca. 1500 m long, containing 58.6 million points.
3) mav_szabadszallas_csengod_666285_159100_666436_159200.laz is a curved rail track segment on flat terrain between Szabadszállás and Csengőd, 100 m long, containing 7.3 million points. Manually annotated ground truth data for cable and rail track recognition is also attached.
DOI: 10.6084/m9.figshare.22086266.v1
title: DeGennaro_MultipleAwakenings

description: Twenty subjects (age range 18-30) were involved in the protocol.All participants signed informed consent for the collection and treatment of data prior to participating to the experiment. Each subject participated in two experimental sessions structured as follows: a) EEG montage; b) subjects were instructed to consider any distinct mental activity occurring during sleep as a dream experience; c) polysomnography (PSG) with planned-provoked awakenings; d) final morning awakening. <br> In order to ensure comparability between the two experimental nights, each subject was required to keep regular sleep-wake schedule during the week preceding the experimental session. The compliance was verified by a sleep diary. Experimental sessions were separated by at least one week. Subjects were also requested to abstain from caffeine and alcohol during the day of experimental session. The timing of the sleep–wake schedule during the protocol was adjusted to individual sleep-wake habits. <br> Multiple awakenings were planned for each sleep cycle from REM sleep or NREM sleep after at least 5 min without stage shifts by calling out the first name of the subject through an interphone system. Participants were asked to report if they had (REC condition) or had not (NREC condition) a dream experience just before awakening. We did not collect dream contents to avoid an excessive activation that can interfere with subsequent sleep. <br> <br> <br> --DREAM categorization procedure-- <br> 2 = dream experience, 0 = No dream experience, -2 = No Experience or Experience without recall <br> <br> ---Technical details--- <br> Derivations with noise/artifacts are reported in the csv file. <br> --Data acquisition-- <br> The PSG was recorded in a sound-proof, temperature-controlled room inside the sleep laboratory. A Brain Amp MR plus system (Brain Products GmbH, Gilching, Munich) was used to record EEG throughout the nights at a sampling rate of 250 Hz. The 28 unipolar EEG derivations placed following the international 10–10 system (C3, C4, Cp1, Cp2, Cp5, Cp6, Cz, F3, F4, F7, F8, Fc1, Fc2, Fc5, Fc6, Fp1, Fp2, Fz, O1, O2, Oz, P3, P4, P7, P8, Pz, T7, T8) were recorded by using an elastic cap (Easycap, Falk Minow, Munich) with sintered Ag–AgCl electrodes. The cortical EEG signals were referenced online to the averaged mastoids (A1, A2) and the ground electrode was located anterior to Fz (Fpz). Electrooculogram (EOG) and submental electromyogram (EMG) channels were also recorded and referenced to mastoids (A1, A2). EEG signals were analogically high-pass filtered with the time constant of 0.3 s and lowpass filtered at 30 Hz. A notch filter was applied (50 Hz). Electrode impedance was fixed below 5 kΩ. Language: Italian. <br> --Data preprocessing-- <br> N/A
DOI: 10.60893/figshare.jcp.28811951.v1
title: Supporting Information

description: Supporting information for the manuscript is provided in this file.