cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14547024
title: Data for Same-Slide Spatial Multi-Omics Integration Reveals Tumor Virus-Linked Spatial Reorganization of the Tumor Microenvironment

description: Data for Same-Slide Spatial Multi-Omics Integration Reveals Tumor Virus-Linked Spatial Reorganization of the Tumor Microenvironment

The Archive data.tar.gz includes essential data directories for analysis and visualization related to various computational studies. Below are details of each directory's purpose and contents:





DLBCL_run: Contains datasets and scripts specifically tailored for the analysis of Diffuse Large B-Cell Lymphoma (DLBCL). It provides processed data necessary for detailed analyses and visualization.




SGCC_data: This directory contains simulation data for Spectral Graph Cross Correlation (SGCC) analyses, which are used to study the relationships within graph-based data structures. 




Tonsil_run: Features data and resources for analyzing Tonsil tissue samples. The folder includes datasets essential for conducting detailed tissue analysis and visualization.



Extracting the Data

To extract the contents of this archive, execute the following command in a Unix-based system's terminal:



tar -zxvf data.tar.gz 


This command will decompress and unpack the data.tar.gz file into the current directory, maintaining the structured organization of the folders as described above.

Usage

The data extracted is prepared for immediate analysis with the scripts available on our GitHub repository. These scripts are specially crafted to interact with the data formats found within the extracted directories, with comprehensive annotations to assist users in understanding and adapting them as needed.
DOI: 10.15468/dl.h9b5zn
title: Occurrence Download

description: A dataset containing 499 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-124.77545 47.57801,-116.32770 47.57801,-116.32770 50.95711,-124.77545 50.95711,-124.77545 47.57801))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aplodontia rufa (Rafinesque, 1817)"
 ]
}

 The dataset includes 499 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003039-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.px5egz
title: Occurrence Download

description: A dataset listing the 533 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anadara Gray, 1847"
 ]
}

 The dataset's 533 records were derived from 322 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003019-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/dgv8jrxt4w.1
title: Spatial mapping of activity changes across sensory areas following visual deprivation in adults

description: Data used for publication.
All image files are provided in three separate databases:
Part 1 is available at doi: 10.17632/rgkpb7npy5.1
Part 2 is available at doi: 10.17632/hrwy3bvzp5.1
Part 3 is available at doi: 10.17632/w4sdd9278b.1
DOI: 10.15468/dl.985xpf
title: Occurrence Download

description: A dataset containing 1076 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "TaxonKey is Entylia Germar, 1833"
 ]
}

 The dataset includes 1076 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003040-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qrhnq6
title: Occurrence Download

description: A dataset containing 596136 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-90.09747 20.2116,-89.00432 20.2116,-89.00432 21.24153,-90.09747 21.24153,-90.09747 20.2116))",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (CR, EN, VU, NT, LC)",
 "OccurrenceStatus is Present",
 "TaxonKey is Chordata",
 "Year 1980-2025"
 ]
}

 The dataset includes 596136 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003022-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/xsjx345rpc.1
title: Driver Psychological Resilience Scale Data

description: Research hypotheses: H1: A revised CD-RISC can assess driver resilience effectively among the Chinese driver population.
H2: Psychological resilience is negatively associated with driving anger.
H3: Driver psychological resilience mediates the relationship between age and driving anger.
H4: Driver psychological resilience is strongly associated with demographic factors, including sex, age, and driving experience.

Results: Factor analysis identified four dimensions for the revised scale: individual abilities, positive emotions, acceptance of change, and belief. The scale demonstrated strong internal consistency and structural validity. The correlation tests revealed a negative correlation between driver resilience and driving anger. Mediation analysis showed older drivers to have lower driving anger, with psychological resilience partially mediating this effect. Demographic analysis revealed that male drivers had higher resilience than female drivers; professional drivers scored higher than non-professionals; and drivers with over 10 years of experience showed greater resilience. The 24-item resilience scale has strong psychometric properties, making it an effective tool for assessing psychological resilience in drivers.
DOI: 10.17632/twm3jg4cyw
title: Adaptive_RBF_nerual_network_data

description: Simulation results of adaptive RBF neural network control for bidirectional stable system
DOI: 10.17632/twm3jg4cyw.1
title: Adaptive_RBF_nerual_network_data

description: Simulation results of adaptive RBF neural network control for bidirectional stable system
DOI: 10.15468/dl.rvcfvf
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-71.06647 -17.85972,-69.39165 -16.47653,-70.18648 -15.32994,-72.11679 -14.50705,-74.18903 -14.12197,-75.69353 -15.16561,-71.06647 -17.85972))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Calidris himantopus (Bonaparte, 1826)",
 "Year 2021-2025"
 ]
}

 The dataset includes 78 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003041-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n6vfs6
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is one of (Brazil)",
 "Year is greater than or equal to 1905",
 "Year is less than or equal to 1935",
 "TaxonKey is Macrothelypteris torresiana (Gaudich.) Ching"
 ]
}

 The dataset includes 22 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003042-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/2jdy2wr2bz.1
title: Risk factors associated with cytomegalovirus infection in patients with drug-induced hypersensitivity syndrome/drug rash with eosinophilia and systemic symptoms (DIHS/DRESS): Comparison with a population with drug eruptions

description: Supplemental material for Miyagawa F et al. Risk factors associated with cytomegalovirus infection in patients with drug-induced hypersensitivity syndrome/drug rash with eosinophilia and systemic symptoms (DIHS/DRESS): Comparison with a population with drug eruptions. JAAD International, 2025
DOI: 10.15468/dl.xf4vyr
title: Occurrence Download

description: A dataset containing 508 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is one of (January, February, March, April, May, June, July, August)",
 "TaxonKey is Spodoptera eridania Stoll"
 ]
}

 The dataset includes 508 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003043-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/gkztg7fhn3
title: Functional morphology and early growth of seedlings tropical species

description: The objective of the work was to review the functional morphology and growth of seedlings of six tropical species useful for restoration. The experiment was carried out under nursery conditions. data on plant height and basal diameter were collected, relative growth rates were obtained and these data were used to apply a repeated measures analysis of variance.
DOI: 10.17632/gkztg7fhn3.1
title: Functional morphology and early growth of seedlings tropical species

description: The objective of the work was to review the functional morphology and growth of seedlings of six tropical species useful for restoration. The experiment was carried out under nursery conditions. data on plant height and basal diameter were collected, relative growth rates were obtained and these data were used to apply a repeated measures analysis of variance.
DOI: 10.15468/dl.53g975
title: Occurrence Download

description: A dataset containing 1913484 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Urtica L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1913484 records from 4711 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003030-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/1l2-dpe-1qw
title: Pertusaria fukiensis var. kushana Zahlbr.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/53w-4fp-r2b
title: Agenium leptocladum (Hack.) Clayton

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/l0z-kbc-2cm
title: Ifloga thellungiana Hilliard & B. L. Burtt

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/q6n-sc8-1vy
title: Suaeda eltonica Iljin

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccp8p4r
title: CCDC 633954: Experimental Crystal Structure Determination

description: Related Article: R.K.Haynes, Ho-Ning Wong, Kin-Wo Lee, Chung-Man Lung, Lai Yung Shek, I.D.Williams, S.L.Croft, L.Vivas, L.Rattray, L.Stewart, V.K.W.Wong, B.C.B.Ko|2007|ChemMedChem|2|1464|doi:10.1002/cmdc.200700065
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccp8p5s
title: CCDC 633955: Experimental Crystal Structure Determination

description: Related Article: R.K.Haynes, Ho-Ning Wong, Kin-Wo Lee, Chung-Man Lung, Lai Yung Shek, I.D.Williams, S.L.Croft, L.Vivas, L.Rattray, L.Stewart, V.K.W.Wong, B.C.B.Ko|2007|ChemMedChem|2|1464|doi:10.1002/cmdc.200700065
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/6k7-n1a-b11
title: Poa lilloi Hack.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/av9-gbf-ssg
title: Festuca varia subsp. scoparia A. Kern. & Hack.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/hmv-pmb-wdz
title: Astomiopsis sinensis Broth.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccp8020
title: CCDC 633301: Experimental Crystal Structure Determination

description: Related Article: R.K.Haynes, Ho-Wai Chan, Chung-Man Lung, Nga-Chun Ng, Ho-Ning Wong, Lai Yung Shek, I.D.Williams, A.Cartwright, M.F.Gomes|2007|ChemMedChem|2|1448|doi:10.1002/cmdc.200700064
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccp8p6t
title: CCDC 633956: Experimental Crystal Structure Determination

description: Related Article: R.K.Haynes, Ho-Ning Wong, Kin-Wo Lee, Chung-Man Lung, Lai Yung Shek, I.D.Williams, S.L.Croft, L.Vivas, L.Rattray, L.Stewart, V.K.W.Wong, B.C.B.Ko|2007|ChemMedChem|2|1464|doi:10.1002/cmdc.200700065
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/76c-ryb-8x6
title: Festuca spectabilis subsp. carniolica (Hack.) Hayek

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/cwa-89e-kbz
title: Festuca arundinacea var. subalpina (Hack.) Asch. & Graebn.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/kve-swm-5k7
title: Poa hackelii Post

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccp8031
title: CCDC 633302: Experimental Crystal Structure Determination

description: Related Article: R.K.Haynes, Ho-Wai Chan, Chung-Man Lung, Nga-Chun Ng, Ho-Ning Wong, Lai Yung Shek, I.D.Williams, A.Cartwright, M.F.Gomes|2007|ChemMedChem|2|1448|doi:10.1002/cmdc.200700064
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/hhd-pxq-zvh
title: Sorghastrum bipennatum (Hack.) Pilg.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/wbf-zfk-lc1
title: Centaurea seresiensis var. araneosula Rech. f.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/wzc-yx1-zx7
title: Poa plicata Hack.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccnykhm
title: CCDC 624231: Experimental Crystal Structure Determination

description: Related Article: I.Bichlmaier, M.Kurkela, T.Joshi, A.Siiskonen, T.Ruffer, H.Lang, M.Finel, J.Yli-Kauhaluoma|2007|ChemMedChem|2|881|doi:10.1002/cmdc.200600246
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccp7276
title: CCDC 632407: Experimental Crystal Structure Determination

description: Related Article: A.K.H.Hirsch, S.Lauw, P.Gersbach, W.B.Schweizer, F.Rohdich, W.Eisenreich, A.Bacher, F.Diederich|2007|ChemMedChem|2|806|doi:10.1002/cmdc.200700014
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/mxa-bnq-7yw
title: Monsonia grandifolia R. Knuth

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/nhq-rts-w4h
title: Boopis filifolia Speg.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/szn-5lj-nqe
title: Saxifraga glabella Bertol.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccnykjn
title: CCDC 624232: Experimental Crystal Structure Determination

description: Related Article: I.Bichlmaier, M.Kurkela, T.Joshi, A.Siiskonen, T.Ruffer, H.Lang, M.Finel, J.Yli-Kauhaluoma|2007|ChemMedChem|2|881|doi:10.1002/cmdc.200600246
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.15740.08326
title: Effect of hot extrusion on microstructure and mechanical properties of Mg-Zn-0.5Ca-0.5RE alloys
DOI: 10.3535/gc3-zlk-m1e
title: Artemisia annua L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/m9x-w8g-82m
title: Festuca apennina De Not.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/wc5-099-dh3
title: Agrostis castellana Boiss. & Reut.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/cc9y8n4
title: CCDC 296256: Experimental Crystal Structure Determination

description: Related Article: R.Paulini, C.Trindler, C.Lerner, L.Brandli, W.B.Schweizer, R.Jakob-Roetne, G.Zurcher, E.Borroni, F.Diederich|2006|ChemMedChem|1|340|doi:10.1002/cmdc.200500065
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc9y8p5
title: CCDC 296257: Experimental Crystal Structure Determination

description: Related Article: R.Paulini, C.Trindler, C.Lerner, L.Brandli, W.B.Schweizer, R.Jakob-Roetne, G.Zurcher, E.Borroni, F.Diederich|2006|ChemMedChem|1|340|doi:10.1002/cmdc.200500065
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccns2hz
title: CCDC 618961: Experimental Crystal Structure Determination

description: Related Article: D.M.Fisher, P.J.Bednarski, R.Grunert, P.Turner, R.R.Fenton, J.R.Aldrich-Wright|2007|ChemMedChem|2|488|doi:10.1002/cmdc.200600211
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/324-r63-xj6
title: Selaginella P. Beauv.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/r7c-ngz-fm5
title: Bromus hordeaceus L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/tt1-n87-r0a
title: Poa humillima Pilg.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccp3294
title: CCDC 628565: Experimental Crystal Structure Determination

description: Related Article: K.W.Fried, C.M.Schneider, K.-W.Schramm, A.Datta, N.Chahbane, C.Corsten, D.R.Powell, D.Lenoir, A.Kettrup, P.Terranova, G.I.Georg, K.K.Rozman|2007|ChemMedChem|2|890|doi:10.1002/cmdc.200700005
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccpc5v1
title: CCDC 636363: Experimental Crystal Structure Determination

description: Related Article: M.W.Powner, C.Anastasi, M.A.Crowe, A.L.Parkes, J.Raftery, J.D.Sutherland|2007|ChemBioChem|8|1170|doi:10.1002/cbic.200700098
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/dkr-cm7-yne
title: Pimpinella purpurea (Franch.) H. Boissieu

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/h1l-s5a-h5s
title: Poa binata Nees

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.5517/ccq10lb
title: CCDC 656381: Experimental Crystal Structure Determination

description: Related Article: D.A.Beauchamp, S.J.Loeb|2007|Dalton Trans.||4760|doi:10.1039/b711960g
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3535/bnm-mne-p21
title: Poa kurtzii R. E. Fr.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/g74-njr-93r
title: Micromeria microphylla (d'Urv.) Benth.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/myq-pgk-j28
title: Aeollanthus paradoxus (Hua) Hua & Briq.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.