cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/59zk3-g4r16
title: Hylemonella gracilis

description: weird cytosolic density
description: <strong>Tilt Series Date:</strong> 2012-09-23</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Hylemonella gracilis</p>
<strong>Strain:</strong> ATCC 19624</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 75.0 eV/Å²,  defocus: -15.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> RAPTOR</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cell grown 48 hr in Broth 233 at 26°C without antibiotics, Final OD600 < 0.1, Spun down by 1000 rcf for 5 min and concentrated by ~10x for plunge freezing</p>
<strong>Sample Preparation:</strong> Vitrobot setting: 100% humidity, 4 ul sample, 10 nm BSA treated gold, -3 offset, 4 s blot time, no drain, ethane/propane mix</p>
  ycw2012-09-23-72_slicer6370.jpg: Unknown ycw2012-09-23-72_slicer6372.jpg: Nucleoid ycw2012-09-23-72_slicer6373.jpg: Unknown filament ycw2012-09-23-72_slicer6376.jpg: Unknown membrane
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2012-09-23-72/rawdata/</p>20120923_Hylemonella_50010.mrc,  Tilt Series (Pixel Size 0.49 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2012-09-23-72/rawdata/20120923_Hylemonella_50010.mrc"
        > <i class="download icon"></i> Download </a></p>

        20120923_Hylemonella_50010_full.rec,  Reconstruction (Pixel Size 1.96 nm), 441.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2012-09-23-72/3dimage_20993/20120923_Hylemonella_50010_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6stcj-jnc70
title: Hippocampal Neurons (cultured)

description: Plunge frozen at DIV 14
description: <strong>Tilt Series Date:</strong> 2014-08-23</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Rat Hippocampal Neuron (cultured)</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 140.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Xiawei Zhuang, Ruobo Zhou (cultured neurons and STORM imaging)</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Plunge frozen at DIV 14 Grids were treated with PDL prior to plating and 3 ul concentrated gold suspended in growth media was added to grid before freezing.</p>
<strong>Sample Preparation:</strong> Grids were plunge froze in a vitrobot at 95 % humidity adn 22 C. They were manually blotted from behind.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2014-08-23-20/rawdata/</p>082314_neurons_27k00190003.mrc,  Tilt Series (Pixel Size 0.41 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2014-08-23-20/rawdata/082314_neurons_27k00190003.mrc"
        > <i class="download icon"></i> Download </a></p>

        082314_neurons_27k00190003_part121_1.rec,  Reconstruction (Pixel Size 1.64 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2014-08-23-20/3dimage_45663/082314_neurons_27k00190003_part121_1.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/evv3c-36p37
title: Myxococcus xanthus delta-pilP

description: grid box YWC064
description: <strong>Tilt Series Date:</strong> 2013-12-30</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 190.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain form Lotte Sogaard-Andersen</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown 48 hr in shaking CTT medium at 30 degrees without antibiotics. OD600=0.7</p>
<strong>Sample Preparation:</strong> Vitrobot settings: 100% humidity, 3µl sample, 10 mg/ml BSA treated gold. -4 offset, 4 sec blot time, 1s drain. Ethane/propane mix. Grid: Quantifoil Cu 2/2 Finder. 10 nm gold beads.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-12-30-27/rawdata/</p>20131230_YWC064_10027.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-12-30-27/rawdata/20131230_YWC064_10027.mrc"
        > <i class="download icon"></i> Download </a></p>

        20131230_YWC064_10027_part131_5.rec,  Reconstruction (Pixel Size 1.56 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2013-12-30-27/3dimage_36895/20131230_YWC064_10027_part131_5.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ftr73-0mc26
title: Rhodobacter sphaeroides JPA 1558

description: cryosections of R sphaeroides strain JPA1558 (TlpT-YFP)
description: <strong>Tilt Series Date:</strong> 2013-06-03</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-66.0°, 66.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 33000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Judy Armitage</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grow  (1 day) in SUX medium + Naldixic acid (6.25 µl of 20mg/ml stock) + Kanamycin (2.5 µl stock 1000x) + 25 µl 10mM IPTG.*Spin down 5ml per strain, resuspend pellets (barely visible) in SUX medium + Kanamycin (2.5 µl stock 1000x) + 25 µl 10mM IPTG.*grow overnight.</p>
<strong>Sample Preparation:</strong> cryosectioning by MArk LAdinsky</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-03-59/rawdata/</p>atlas_grid-2_7x7cryosections0025.mrc,  Tilt Series (Pixel Size 0.38 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-03-59/rawdata/atlas_grid-2_7x7cryosections0025.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas_grid-2_7x7cryosections0025_full.rec,  Reconstruction (Pixel Size 0.76 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-06-03-59/3dimage_27304/atlas_grid-2_7x7cryosections0025_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/tmnjg-bkw26
title: O. tauri G1

description: Ostreococcus tauri cryosections
description: <strong>Tilt Series Date:</strong> 2009-09-14</p>
<strong>Data Taken By:</strong> Lu Gan</p>
<strong>Species / Specimen:</strong> Ostreococcus tauri</p>
<strong>Strain:</strong> RCC745</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-68.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> prepared by Lu Gan at Caltech; high-pressure frozen and cryosectioned by Mark Ladinsky; data collected by Lu Gan; processed by Lu Gan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> 9h in 1mM Hydroxyurea, 12h in 30uM Propyzamide, 3h Propyzamide washout</p>
<strong>Sample Preparation:</strong> Cryoprotectant: 10mg/ml BSA, 2X 10nm gold, 20% Dextran; Cells mixed w/ cryoprotectant shortly before HPF </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2009-09-14-27/rawdata/</p>RCC745_G1tovis_050.mrc,  Tilt Series (Pixel Size 1.26 nm), 704.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2009-09-14-27/rawdata/RCC745_G1tovis_050.mrc"
        > <i class="download icon"></i> Download </a></p>

        RCC745_G1tovis_050.rec,  Reconstruction (Pixel Size 1.26 nm), 213.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lga2009-09-14-27/3dimage_12007/RCC745_G1tovis_050.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.6084/m9.figshare.29005871.v3
title: A Listing of INM317 Design Justice 2025 Student Zines, with DOIs

description: During the 2024-2025 academic year, MSc Human-Computer Interaction Design students taking the INM317 Design Justice module at City St George's, University of London created a Design Justice-themed zine as their final coursewrok. Part of the assessment included depositing their work on figshare open access and include a CC-BY license and citation.After submitting their work internally via Turnitin, students were asked to complete an online form adding their zine's figshare citation text and DOI in different fields in order to create a directory.This Excel spreadsheet file lists the entries contributed by students by the deadline (40 in the initial versions). I refined the data by deduplicating, removing anomalous data and adding a couple of notes. I expect to add another version once students with extensions submit, and/or to correct any remaining errors. Shared as an open educational resource and in order to amplify the student work's reach and hopefully motivate them.Please note this module was not specifically about zinemaking, and most students were new to it. Learning is a process that continues after the submission of the final piece of coursework. Most of these zines are first attempts, and there will be varying levels of proficiency in the items in the collection.
DOI: 10.15468/dl.2y474j
title: Occurrence Download

description: A dataset containing 1168 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (India, China, Myanmar, Nepal, Bhutan, Bangladesh, Pakistan, Afghanistan)",
 "TaxonKey is Sarangesa dasahara (Moore, 1865)"
 ]
}

 The dataset includes 1168 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022688-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15602365
title: SysMus25 Workshop - Human-Swarm Interactive Music Systems - DATA
DOI: 10.5281/zenodo.15602366
title: SysMus25 Workshop - Human-Swarm Interactive Music Systems - DATA
DOI: 10.34894/s2evy1
title: Publication Package 'Familiarity and Audience Effects on Giving: A Functional Magnetic Resonance Imaging Study': postprint, readme (study info) & ethics protocol

description: This is a publication package for the article 'Familiarity and Audience Effects on Giving: A Functional Magnetic Resonance Imaging Study', which can be found here: &lt;br&gt;&lt;a href="https://www-mitpressjournals-org.eur.idm.oclc.org/doi/abs/10.1162/jocn_a_01568"&gt;https://www-mitpressjournals-org.eur.idm.oclc.org/doi/abs/10.1162/jocn_a_01568&lt;/a&gt;&lt;br&gt;&lt;div&gt;&lt;br&gt;&lt;/div&gt;&lt;div&gt;This publication package contains: 1) a postprint of the article, 2) a README file with information about the study, and 3) the approved ethics protocol. &lt;/div&gt;
description: This entry is a three-file data package totaling 1.3 MB, containing files in .pdf and .docx formats.If you use this dataset, please cite: van de Groep, Suzanne; Crone, Eveline A.; Zanolie, Kiki (2020). Publication Package 'Familiarity and Audience Effects on Giving: A Functional Magnetic Resonance Imaging Study': postprint, readme (study info) & ethics protocol. Erasmus University Rotterdam (EUR). Dataset. https://doi.org/10.25397/eur.12555185
DOI: 10.15468/dl.tk6xum
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Canistrum paulistanum (Leme) Wand. & S.E.Martins"
 ]
}

 The dataset includes 12 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022778-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y39akz
title: Occurrence Download

description: A dataset containing 628 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Tipos de Diatomeas de América del Sur contenidos en la Colección Joaquín Frenguelli, División Ficología “Dr. Sebastián A. Guarrera”"
 ]
}

 The dataset includes 628 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022779-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29247263
title: data availability(1).xlsx

description: Supporting original data for publication in Energy & Environmental Science, entitled as "<b>Nanogap induced microwave discharge for ultrafast pyrolysis of waste plastics into syngas with closed-loop catalyst regeneration</b>"
DOI: 10.6084/m9.figshare.29247263.v1
title: data availability(1).xlsx

description: Supporting original data for publication in Energy & Environmental Science, entitled as "<b>Nanogap induced microwave discharge for ultrafast pyrolysis of waste plastics into syngas with closed-loop catalyst regeneration</b>"
DOI: 10.5281/zenodo.15028870
title: Transnational Professional Experience of Military leaders

description: This dataset provides a comprehensive account of the international professional experiences of national Chiefs of Defence (CHODs) and subordinate service chiefs, the top military leaders responsible for advising national political authorities. By compiling information on transnational engagements—including international professional military education, participation in international missions, and service in multinational headquarters—the dataset offers an empirical basis for analyzing military elites' professional socialization and transnational practices. The dataset may serve as a valuable resource for understanding how military leadership shapes national defence strategies and influences transnational military cooperation and policy-making. By revealing patterns of international exposure among top military professionals, the data provides insights into the broader implications of military professionalisation and transnational engagement in an  interconnected global security environment.
DOI: 10.5281/zenodo.15028871
title: Transnational Professional Experience of Military leaders

description: This dataset provides a comprehensive account of the international professional experiences of national Chiefs of Defence (CHODs) and subordinate service chiefs, the top military leaders responsible for advising national political authorities. By compiling information on transnational engagements—including international professional military education, participation in international missions, and service in multinational headquarters—the dataset offers an empirical basis for analyzing military elites' professional socialization and transnational practices. The dataset may serve as a valuable resource for understanding how military leadership shapes national defence strategies and influences transnational military cooperation and policy-making. By revealing patterns of international exposure among top military professionals, the data provides insights into the broader implications of military professionalisation and transnational engagement in an  interconnected global security environment.
DOI: 10.34740/kaggle/dsv/12072054
title: Mahanagar Yatayat Transport Dataset
DOI: 10.5281/zenodo.16890581
title: Semi-structured interview transcripts on local community perspectives on sustainable tourism in Venice

description: This record describes a qualitative dataset resulting from semi-structured in-depth interviews with the local population in the historic old city of Venice, conducted between July 2024 and September 2024 as part of the TOURSUS-EU project within the framework of the Marie Curie Individual Fellowship 2022. Within the project, interviews were conducted with the aim of gaining a deeper understanding of the local population's attitudes, experiences, and motivations regarding sustainable tourism, with a particular focus on the effects of mass tourism. A total of 16 interviews were conducted.
DOI: 10.5281/zenodo.16890582
title: Semi-structured interview transcripts on local community perspectives on sustainable tourism in Venice

description: This record describes a qualitative dataset resulting from semi-structured in-depth interviews with the local population in the historic old city of Venice, conducted between July 2024 and September 2024 as part of the TOURSUS-EU project within the framework of the Marie Curie Individual Fellowship 2022. Within the project, interviews were conducted with the aim of gaining a deeper understanding of the local population's attitudes, experiences, and motivations regarding sustainable tourism, with a particular focus on the effects of mass tourism. A total of 16 interviews were conducted.
DOI: 10.5281/zenodo.16952764
title: Data and code from: Using programmable infusion pump in avian species - a validation methodology in geese

description: Datasets and code used in the article Using programmable infusion pump in avian species - a validation methodology in geese published in Wildlife biology - 2025.
DOI: 10.5281/zenodo.16952765
title: Data and code from: Using programmable infusion pump in avian species - a validation methodology in geese

description: Datasets and code used in the article Using programmable infusion pump in avian species - a validation methodology in geese published in Wildlife biology - 2025.
DOI: 10.15468/dl.g594ry
title: Occurrence Download

description: A dataset containing 18311 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Magnolia grandiflora"
 ]
}

 The dataset includes 18311 records from 481 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000219-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yjhm9w
title: Occurrence Download

description: A dataset listing the 2187 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Denmark",
 "Geometry POLYGON((8.16398 56.67847,8.35995 56.71408,8.43659 56.75612,8.60519 56.89512,8.7 57.14732,8.55921 57.13069,8.34754 57.0636,8.16398 56.67847))",
 "HasGeospatialIssue is false",
 "TaxonKey is Plantae"
 ]
}

 The dataset's 2187 records were derived from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022932-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xemgfh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ctenopharyngodon idella (Valenciennes, 1844)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.6306 -23.844,35.6007 -23.8125,35.6007 -24.0157,35.6306 -23.844))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022947-250525065834625/datasets/export for details.
DOI: 10.15468/dl.psk9a4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oncorhynchus mykiss (Walbaum, 1792)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((15.6372 -28.0032,16.2782 -28.5786,20.509 -28.5786,20.509 -24.0715,15.4933 -24.0715,15.4945 -24.1257,16.0509 -25.6631,15.6372 -28.0032))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022603-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.15602253
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250605o Initial

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250605o Initial. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.5281/zenodo.15602254
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250605o Initial

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250605o Initial. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.5281/zenodo.10939220
title: Unraveling the Impact of Code Smell Agglomerations on Code Stability

description: This replication package contains instructions on how to use our scripts, and all the necessary data to further replicate/expand the work Unraveling the Impact of Code Smell Agglomerations on Code Stability.
DOI: 10.5281/zenodo.12985685
title: Unraveling the Impact of Code Smell Agglomerations on Code Stability

description: This replication package contains instructions on how to use our scripts, and all the necessary data to further replicate/expand the work Unraveling the Impact of Code Smell Agglomerations on Code Stability.
DOI: 10.5281/zenodo.12985851
title: Unraveling the Impact of Code Smell Agglomerations on Code Stability

description: This replication package contains instructions on how to use our scripts, and all the necessary data to further replicate/expand the work Unraveling the Impact of Code Smell Agglomerations on Code Stability.
DOI: 10.5281/zenodo.13787552
title: Unraveling the Impact of Code Smell Agglomerations on Code Stability

description: This replication package contains instructions on how to use our scripts, and all the necessary data to further replicate/expand the work Unraveling the Impact of Code Smell Agglomerations on Code Stability.

Read the README file to replicate or expand our work!