cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/jbhryygbhg
title: Dataset on COVID-19 Insomnia (Coronasomnia)

description: This dataset were collected through a questionnaire between (27/11/2021 to 28/2/2022) about Covid-19  and its effect on the patient’s sleep (Insomnia) whether during the infected period or after recovery and determining its duration, furthermore, determining whether the patient needed to use oxygen to recover from the virus or not, this and other details were extracted from (919) persons around the world between infected and non-infected with Covid-19 through specialized questions about Covid-19 and several details about persons, such as age groups, gender, educational levels, country, blood group ,etc. , where it can be found in detail through the sheet (Data Label).
DOI: 10.25452/figshare.plus.22285732.v1
title: Annotations directory

description: <b>Directory content</b>: This directory contains 21 .CSV files reporting the data about 23 specific drivers’ mannerisms and behaviors (e.g., rubbing/holding face, yawning) observed during the driving session (ID_Number_LabelData).<b>Method and instruments</b>: To collect the annotation data, two trained and independent raters employed a customized video analysis tool (HADRIAN’s EYE software; Di Stasi et al., 2023) to identify and annotate drivers’ fatigue- and sleepiness-related mannerisms and behaviors. The tool allows the synchronized reproduction of the videos obtained through the RGB camera (for further details, see RGB and Depth videos directory) and the recording of the main central screen of the simulator (for further details, see Driving simulator indices directory). Both videos were automatically divided by the HADRIAN’s EYE software into a series of 5-min 39 chunks that were then shuffled and presented to the raters in a randomized order to minimize bias (e.g., overestimating the level of fatigue towards the end of the experimental session). Then, a customized Matlab code (Mathworks Inc., Natick, MA, USA) was used to detect discrepancies in the outputs of the two raters. Two types of discrepancies were detected: (i) type, and (ii) timing of the detected mannerism/behavior. Finally, in case of discrepancies, a third independent rater reviewed the videos to solve the issue.
DOI: 10.6084/m9.figshare.1512427.v3
title: brain tumor dataset

description: This brain tumor dataset contains 3064 T1-weighted contrast-inhanced images with three kinds of brain tumor. Detailed information of the dataset can be found in readme file.
DOI: 10.6084/m9.figshare.28105175.v1
title: Village Fengshui Forests1-Data S1.xlsx

description: Data supported the key findings in "Village fengshui forests act as a biodiversity conservation paradigm outside nature reserves"
DOI: 10.6084/m9.figshare.3085162.v7
title: Editorial

description: Editorial
DOI: 10.17632/jrmm82m4mv
title: Wind Turbine Blade Surfaces Dataset

description: The proposed dataset aims to provide a number of wind turbine blade images for testing and training purposes. The featured datasets can be used for testing and evaluation of Structure from Motion algorithms for 3D reconstruction, as data for machine learning algorithms for detecting damaged areas on blades or for quantifying blade surface roughness. Images are taken using Canon 5Ds DSLR camera with resolution of 8688 x 5792. The images come with EXIF data, containing additional information about the used capturing settings. The dataset is separated into two parts: - A dataset containing 5 wind turbine blade patches of areas of different surface structure. Two of the patches are of damaged areas, two of the patches are of rough areas, without pronounced surface deformations and one of the patches is a reference area, that does not contain any roughness or damages. The final patch contains the whole of the blade's edge area and is comprised of a mix of severely damaged areas, areas of small roughness and clear areas. The dataset also contains ground truth microscopy data for two of the damaged patches. The ground truth is scaled to absolute scale. - A dataset containing images of a small blade segment. The blade has been sand blasted, to imitate prolonged real world use. The images are taken both outdoor and indoor. The indoor images contain patches specifying areas of interest - one containing a rough patch and one containing damages. The outdoor images are focused on the whole blade and do not contain patches. The dataset also contains ground truth microscopy data for the two patches, which is scaled to absolute scale.
DOI: 10.6084/m9.figshare.28399424.v1
title: my data.xlsx

description: Background: Beta-thalassemia is caused by mutations that affect several phases of beta-globin protein synthesis. Patients with β-thalassemia often have blood transfusions and suffer from iron overload. Individuals diagnosed with thalassemia may be prone to infections resulting from bacteria or fungi, such as Candida albicans. Aims: This study primarily aims to examine the correlation between iron, ferritin concentrations, and C. albicans infection in individuals with beta-thalassemia major and beta-thalassemia minor compared with healthy subjects. Materials and methods: This research involved ninety participants, thirty patients with thalassemia major and thirty patients with thalassemia minor compared with thirty healthy controls. Saliva samples were obtained and cultivated to isolate, identify, and calculate the viable colony count of C. albicans in (cfu/ml). In contrast, serum levels of iron and ferritin were quantified using chemical analyzers. Result: The results showed that 73.33 % of the thalassemia major group exhibited oral C. albicans colonization, which is significantly higher than that of the thalassemia minor group 40% and control group 6.67%. Biochemical analyses revealed significantly higher iron 278.82 µg/dl and ferritin 2783.80 ng/ml levels in the major group p&lt;0.001 when compared with both thalassemia minor group 122.652 µg/dl, 74.723 ng/ml and control groups 127.438 µg/dl and 63.150 ng/ml respectively. C. albicans colony count in saliva was significantly elevated in the beta-thalassemia major, as compared with the beta-thalassemia minor group and control group. Conclusion: These findings suggest that iron overload, which results from recurrent blood transfusions and causes immune dysfunction, contributes to the higher risk of oral fungal infections in Beta-thalassemia patients compared with controls.
DOI: 10.6084/m9.figshare.5124271.v1
title: Supplementary Material for: Gain of <b><i>FAM123B</i></b> and <b><i>ARHGEF9 </i></b>in an Obese Man with Intellectual Disability, Congenital Heart Defects and Multiple Supernumerary Ring Chromosomes

description: In a 24-year-old man with mild intellectual disability, congenital heart defects and obesity, we identified up to 4 small supernumerary marker chromosomes (sSMCs) in blood metaphases. The ring-shaped sSMCs were derived from chromosomes 11, 12 and X as well as a fourth, unidentified chromosome. In interphase nuclei of epithelial cells from the urinary tract and buccal mucosa, the presence of the r(11), r(12) and r(X) was confirmed by FISH. Using Illumina Infinium 317K SNP-arrays, we detected 3 copies of the pericentromeric regions of chromosomes 11, 12 and X. The r(X) was present in 84–89% of cells in the various tissues examined, lacks the <i>XIST</i> gene, but contains <i>FAM123B</i>, a potential dosage-sensitive candidate gene for congenital cardiac abnormalities, and <i>ARHGEF9</i>, a candidate gene for intellectual disability. <i>ARHGEF9</i> encodes collybistin (CB), which is required for localization of the inhibitory receptor-anchoring protein gephyrin and for formation and maintenance of postsynaptic GABA<sub>A</sub> and glycine receptors. We propose that the 2-fold increase in dosage of <i>ARHGEF9</i> disturbs the stoichiometry of CB with its interacting proteins at inhibitory postsynapses. SNP alleles and short tandem repeat markers on the r(11) and r(X) were compatible with a maternal origin of both sSMCs through a meiosis II error. The sSMCs may have resulted from predivision chromatid nondisjunction, leading to anaphase lagging, followed by incomplete degradation of the supernumerary chromosomes.
DOI: 10.6084/m9.figshare.5716366.v1
title: Dataset from Tetrapod distribution and temperature rise during the Permian–Triassic mass extinction

description: Here we provide all data used in this paper, calculations and plots
DOI: 10.17632/3ddfz4f2k8
title: Similarity over Status in Partner Selection under Competition

description: Project Description
This research investigates the tension between gender homophily (preference for same-gender partners) and strategic considerations in competitive contexts. Across three pre-registered studies, we examine whether participants prioritize strategic advantage or gender similarity when selecting competitors and teammates.
Study 1 tests partner selection patterns in individual and team-based competitions involving an arithmetic reasoning task. Contrary to Status Characteristics Theory (SCT) predictions, participants predominantly select same-gender partners in both competitor and teammate roles, suggesting a stronger influence of gender homophily than anticipated.
Study 2 employs an incentivized belief elicitation task to examine whether the unexpected results from Study 1 stem from an absence of gender-based performance expectations. Results reveal that participants actually believe women outperform men in the arithmetic task, yet still exhibit same-gender preferences in partner selection.
Study 3 tests the robustness of gender homophily by introducing explicit performance information that conflicts with homophilous preferences. Even when presented with clear performance metrics and monetary incentives, a significant proportion of participants forgo optimal strategic choices in favor of gender similarity.
Our findings establish boundary conditions for Status Characteristics Theory and demonstrate that gender homophily can persist even when it contradicts both status-based expectations and rational choice predictions.



Repository Contents
Data Files:
S1_data.csv: Participant selections and demographic data from Study 1 examining partner selection patterns
S2_v1.csv: Belief elicitation data from Study 2, Version 1 (no competition context)
S2_v2.csv: Belief elicitation data from Study 2, Version 2 (individual competition context)
S2_v3.csv: Belief elicitation data from Study 2, Version 3 (team competition context)
S3_data.csv: Study 3 data testing gender homophily against explicit performance information

Analysis Scripts:

S1_Analysis_Code.R: R script for analyzing Study 1 partner selection patterns
S2_Analysis_Code.R: R script for analyzing Study 2 belief elicitation tasks across all versions
S3_Analysis_Code.R: R script for analyzing Study 3 gender homophily against performance ratings

Otree Code is also included
DOI: 10.6084/m9.figshare.25846003.v8
title: IPHs

description: <b>haplotypes resolved genomes for phased potato pangenome graph</b>
DOI: 10.6084/m9.figshare.5126425.v1
title: Supplementary Material for: Left Ventricular Mass Progression despite Stable Blood Pressure and Kidney Function in Stage 3 Chronic Kidney Disease

description: <b><i>Background/Aims:</i></b> Progressive chronic kidney disease (CKD) is associated with worsening cardiovascular (CV) risk not explained by traditional risk factors. Left ventricular (LV) hypertrophy (LVH) is an important CV risk factor, but its progression has not been documented in early CKD. We explored whether progression of LVH in early CKD would occur despite stable kidney function. <b><i>Methods:</i></b> We conducted a post hoc analysis of a 12-month study of lanthanum carbonate in stage 3 CKD, which included longitudinal assessments of CV biomarkers. Primary outcome for the analysis was the change in LV mass (LVM) indexed to height in meters<sup>2.7</sup> (LVM/Ht<sup>2.7</sup>). Secondary outcomes were changes in blood pressure (BP), pulse-wave velocity, LV systolic/diastolic function, fibroblast growth factor 23 (FGF23), klotho, and estimated glomerular filtration rate (eGFR). <b><i>Results:</i></b> Thirty-one of 38 original subjects had sufficient data for analysis. LVM/Ht<sup>2.7</sup> increased (47 ± 13 vs. 53 ± 13 g/m<sup>2.7</sup>, p = 0.006) over 12 months despite stable BP, stable eGFR and normal LV systolic function. Vascular stiffness and LV diastolic dysfunction persisted throughout the study. Klotho levels decreased (748 ± 289 to 536 ± 410 pg/ml, p = 0.03) but were unrelated to changes in LVM/Ht<sup>2.7</sup>. The change in FGF23/klotho ratio was strongly correlated with changes in LVM/Ht<sup>2.7</sup> (r<sup>2</sup> = 0.582, p = 0.03). <b><i>Conclusion:</i></b> Subjects with stage 3 CKD exhibited increasing LVM, persistent LV diastolic dysfunction and vascular stiffness despite stable kidney function, BP and LV systolic function. Abnormal FGF23 signaling due to reduced klotho expression may be associated with increasing LVM. These findings deserve further evaluation in a larger population given the adverse prognostic value of these CV biomarkers.
DOI: 10.17632/t967c5kmng
title: Petrogenesis of Cenozoic submarine basalts from the South China Sea spreading ridge: Constraints from geochemistry and Al-in-olivine thermometry

description: The South China Sea (SCS) is a typical case of a tectonic plate having undergone a complete Wilson cycle. Here we report new major- and trace-element compositions of bulk-rock samples and volcanic glasses, combined with mineral chemistry of phenocrysts (i.e., olivine, pyroxene, and plagioclase) and of olivine-hosted spinel inclusions from three International Ocean Drilling Program drill cores, i.e., Sites U1431, U1433, and U1434, in the SCS spreading ridge. The bulk-rock samples are all tholeiitic in composition and show relative depletion in light rare-earth elements (LREEs) and enrichment in heavy rare-earth elements (HREEs), resembling the pattern of mid-ocean ridge basalt (MORB). Nevertheless, the volcanic glasses are relatively enriched in alkalis and LREEs and depleted in HREEs and exhibit positive anomalies in Nb, Ta, and Ti as well as a positive Nb relative to La and Th, suggesting ocean island basalt (OIB)-type geochemical features related to a mantle plume. Complex zoned textures in the Ca-rich plagioclase, Ca-deficient augite, and olivine phenocrysts are suggestive of fractional crystallization and magma-mixing processes, resulting in a change in bulk-rock composition. On the basis of distinct thermometers, we determined crystallization pressure and temperature for the SCS Cenozoic volcanic rocks to be 2.6–4.9kbar (bulk-rock composition), 2.0–6.5kbar (volcanic glasses), and 3.2–5.6kbar (clinopyroxene-liquid) and 1,196–1,312°C (clinopyroxene-liquid) 1,250–1,346°C (olivine-liquid), and 1,178–1,260°C (plagioclase), respectively. The application of an Al-in-olivine thermometer provided mantle potential temperatures varying within 1,295–1,419°C, a range much higher than that of other primitive MORBs but comparable to that of Icelandic OIB. Mantle peridotite did not serve as the sole source of the SCS basalts; the melt involved 18.5% eclogite (dense, recycled oceanic crust) and 46.1% garnet pyroxenite (produced by the reaction between the peridotite melt and recycled oceanic crust). These findings are consistent with the geochemical features of the late Cenozoic volcanic rocks in Hainan and surrounding areas associated with a mantle plume. Our results support a mantle-plume–ridge interaction model.
DOI: 10.6084/m9.figshare.28012568.v2
title: Aquatic greenhouse gas data (Peel-Harvey catchment and estuary)

description: Concentrations of dissolve greenhouse gases (N2O, CH4, CO2) were measured across the land-ocean aquatic continuum (LOAC) in the Peel-Harvey catchment and estuary (Western Australia). Data were collected in 2018. Files contain dissolved gas concentrations, water physiochemical properties (dissolved oxygen, temperature, salinity, total dissolved nitrogen, total dissolved phosphorous, nitrate), and the weather and hydrology information relevant to gas transfer calculations.For additional information related to this project, including the full suit of hydrodynamic data, please access this repository.
DOI: 10.6084/m9.figshare.28868390.v2
title: leukemia 1

description: Classifying Acute Lymphoblastic Leukemia cells from normal cells using deep learning method
DOI: 10.6084/m9.figshare.1593099.v1
title: The Correlation between Insect abundance and plant density or plant height

description: Group Members: Xi Qiu, Michael Angelini, Kate Villanueva Britanico, Kristine Del Rosario, Nassar EnKaye The purpose of this experiment is to see whether or not there will be a noticeable positive or negative correlation between insect abundance and plant height or the level of crowding of plants in the grasslands. The experiment was conducted on two different days, Wednesday October 14th and Wednesday October 21st 2015, at the grasslands near York University. The weather on October 14th was partially cloudy with the temperature of 14 degrees Celsius whereas on October 21st, the weather was overcast and windy with the temperature of 12 degrees Celsius during the experiment. The duration of the experiment and data collecting was 2.5 hours on each day, from 3 pm to 5:30 pm. The grassland consists mostly tall grass, a few trees and short plants. The equipment used during this experiment including 2 quadrants (one meter by one meter), 40 pans of the same color, soapy water, and 2 tape measures. To collect the data, all the pans were marked from 1 to 40 first, 8 pans were then assigned to each group member to place randomly over the grassland, and then fill them with soapy water at the same time place the quadrat around the pan, measure and estimate the average plant height with the tap measure and estimate the level of crowding within the quadrat. After everything was measured, the group waited for 1 and half hours before counting the numbers of insects caught within each pans. Since it rained on the day before October 21st and during the experiment it was cold and windy, the data collected on October 21st shows significant less insect abundance than the data collected on October 14th. However from the overall data collected over these two days, no significant correlation has shown between the insect abundance and the level of crowding or the average plant height.
DOI: 10.6084/m9.figshare.27151257.v1
title: Raw data

description: Raw data
DOI: 10.6084/m9.figshare.1036423.v1
title: Test for the code to calculate the Normalized Difference Soundscape Index

description: NDSI Test<br>========= This files in this folder are part of a test of the Normalized Difference Soundscape Index (NDSI) obtained with the original Matlab script, courtesy of Stuart Gage, and the R package soundecology: http://ljvillanueva.github.io/soundecology/ Each soundfile filename has the date and time, encoded as: LA##_YYYYMMDD-HHMMSS.wav Extract the files in sounds.zip file to run the test. The file M-R-Merge-60S.csv has the NDSI value obtained for each file, MAT-AUCC_NDSI is from the Matlab code, while Soundecology_NDSI is from R and soundecology. The file ndsi_test.R is the R script used to test the files.
DOI: 10.6084/m9.figshare.28533164.v1
title: Kaggle

description: This is the data set used in the paper Brain Tumor Classification (MRI), and the complete data set can be found at: https://www.kaggle.com/datasets/sartajbhuvaji/brain-tumor-classification-mri
DOI: 10.6084/m9.figshare.7666754.v1
title: Additional file 3: of Evolutionarily significant A-to-I RNA editing events originated through G-to-A mutations in primates

description: Table S3. A-to-I editing events located on polymorphic sites in the macaque population. (XLSX 1879 kb)
DOI: 10.6084/m9.figshare.13151132.v1
title: Gene database of Streptomyces coelicolor A3(2)

description: <i>Streptomyces coelicolor</i> is a filamentous microorganism with a single linear chromosome with distinct telomeres. Capable of asymmetric cell division and development of hyphae, the microorganism is an interesting model organism for understanding cellular differentiation in microbial life. Using an in-house MATLAB software for parsing the annotated genome sequence of <i>S. coelicolor</i> A3(2), this work builds a gene database of the organism. Comprising gene name, gene function, and gene sequence of all genes in the genome of the microorganism, the resource should be useful for diving deeper into the mystery of cellular differentiation in this multi-facet microorganism.
DOI: 10.6084/m9.figshare.21967052.v1
title: Data

description: Data provided to reproduce our analysis in: <br> <strong>"Strict forest protection: A meaningful contribution to Climate Smart Forestry? - An evaluation of temporal trends in the carbon balances of unmanaged forests in Germany" </strong>(Frontiers in Forests and Global Change)
DOI: 10.6084/m9.figshare.22679824.v1
title: Data of the motor

description: This data set is the motor-related data of wheeled electric drive loader under specific operating conditions.This data can be used as reference for the development of relevant vehicle structure and control system.
DOI: 10.6084/m9.figshare.24901596.v1
title: Genome assembly of <i>Ophraella communa</i>

description: The beetle<i> Ophraella communa </i>LeSage (Coleoptera: Chrysomelidae) is an effective biological control agent targeting the common ragweed. In this file, we offer the annotation files of the <i>Ophraella communa </i>chromosome-level genome, including the genome assembly, structure annotation, function annotation and fasta file of amino acid sequences of all protein-coding genes.
DOI: 10.6084/m9.figshare.26345281.v1
title: Supplementary file 1 of Jimi (2024)

description: List of species provided in Jimi et al. (2024)
DOI: 10.6084/m9.figshare.27002980.v1
title: Results and R-code underlying: Multiple threshold-selection methods are needed to binarise species distribution model predictions

description: Model code and results calculated with this model code as published in "Multiple threshold-selection methods are needed to binarise species distribution model predictions".
DOI: 10.17632/5cvmx554p6
title: supplementary result tables

description: Tables on Anatomical distribution of cysts in different organs and muscles, Sociodemographic profiles of the respondents in the study area, questionnaire results on KAP of the study respondents towards. T.saginata taeniasis and cysticercosis
DOI: 10.6084/m9.figshare.21229496.v1
title: Data and code for "Exploring Deep Learning for Metalloporphyrins: Databases, Molecular Representations, and Model Architectures" by An Su, Chengwei Zhang, Yuan-Bin She, and Yun-Fang Yang

description: Data and code for "Exploring Deep Learning for Metalloporphyrins: Databases, Molecular Representations, and Model Architectures" by An Su, Chengwei Zhang, Yuan-Bin She, and Yun-Fang Yang.