cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/xyzebt
title: On some deep-sea Stenheliinae from the Gulf of California and the west coast of the Baja California Peninsula (Mexico): Pseudostenhelia bathyalis sp. nov., and Beatricella calidafornax sp. nov. (Copepoda: Harpacticoida: Miraciidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Gómez, Samuel (2021): On some deep-sea Stenheliinae from the Gulf of California and the west coast of the Baja California Peninsula (Mexico): Pseudostenhelia bathyalis sp. nov., and Beatricella calidafornax sp. nov. (Copepoda: Harpacticoida: Miraciidae). Zootaxa 5051 (1): 151-170, DOI: https://doi.org/10.11646/zootaxa.5051.1.11
DOI: 10.17632/n5cpfr4536.1
title: Maize production systems, farmers’ perception and current status of Maize Lethal Necrosis in selected counties in Kenya

description: The project is to understand maize production practices and farmers' perception to MLN in selected study regions in Kenya. 406 farmers' were interviewed after giving their consent to be asked questions. GPS data was collected, farmers responses were recorded in KoBoCollect. 
Depending on the questions, the responses were either yes/no, numeric values,categorical variables, or the opinion of the farmer which was recorded.
Data analysis was done by determining the frequencies, means of the data and also by ANOVA analysis
DOI: 10.17632/t5tnw2tsmc.1
title: Reported Sequence as of 16NOV2021 for the Coronavirus - Host: Ferret; in the USA /North America /Florida

description: Analysis of 1 Ferret Coronavirus Sequence in North America /USA/ Florida. Host: Mustela furo (Ferret)
DOI: 10.17632/ypdfnvhxrh.1
title: Reported Sequences as of 16NOV2021 for the Coronavirus - Host: Otter; in the USA /North America /Florida

description: Analysis of 3 Otter Coronavirus Sequences in North America /USA/ Florida. Host: Aonyx cinereus (Otter)
DOI: 10.17632/34vhx5bpr8.1
title: Reported Sequences as of 16NOV2021 for the Coronavirus - Host: Tiger; in the USA /North America /Florida

description: Analysis of 3 Tiger Coronavirus Sequences in North America /USA/ Florida. Host: Panthera Tigris (Tiger)
DOI: 10.17632/mp8k3n6kv4.1
title: Reported Sequences as of 16NOV2021 for the Coronavirus - Host: Dog; in the USA /North America /Florida

description: Analysis of 4 Dog Coronavirus Sequences in North America /USA/ Florida. Host: Canis lupus familiarize (Dog)
DOI: 10.17632/7kggshnrkg.1
title: Reported Sequences as of 16NOV2021 for the Coronavirus - Host: Cat; in the USA /North America /Florida

description: Analysis of 5 Cat Coronavirus Sequences in North America /USA/ Florida. Host: Felis catus (Cat)
DOI: 10.17632/xm8kjn8xmp.1
title: Microfluidic platform based on site-specific post-imprinting modification of molecularly imprinted monolith to improve identification of N-myristoylated peptides

description: In order to improve the identification of N-myristoylated peptides by mass spectrometry, an enrichment strategy based on microfluidic platform was presented by combining molecularly imprinted polymer (MIPs) with post-imprinting modification and trypsin-immobilized enzyme reactor (IMER). The resulting imprinted monolith was used as an apparatus for peptides enrichment in a microfluidic platform composed of a chip and IMER for treatment of the proteins extracted from MCF-7 cells. A total of 1,296 proteins and 5,670 peptides can be identified, including 71 myristoylated proteins and 78 myristoylated peptides. The uploaded compressed package included Origin data, Total myristoylated peptides, Total myristoylated proteins, Total peptides and proteins before fractionation, Total peptides and proteins in the effluent, rinse and  eluent after fractionation.
DOI: 10.17632/g9b8k73vzx.1
title: NGS analyses of miRNA cargo in extracellular vesicles from melanoma cell lines and normal melanocytes  as well as the endogenous miRNA expression of these cells 

description: Primary normal human epidermal melanocytes (NHEM) from three different donors and three melanoma cell lines (WM35, WM9 and WM902B) were briefly cultured (48 h). EVs were isolated from the conditioned medium (CM) by different centrifugation steps, in-cluding ultracentrifugation. To investigate the miRNA cargo in EVs and the miRNA expression in the corre-sponding cells, total RNA was isolated. 10-50 ng of total RNA was used in the small RNA protocol with the NEXTflex Small RNA-seq Kit v3 (Bioo Scientific) according to the instructions of the manufacturer. A pool of libraries was used for sequencing at a concentration of 10 nM. Sequencing of 1x75 bp was performed with an Illumina NextSeq 550 sequencer at the sequencing core facility of the IZKF Leipzig (Faculty of Medicine, University Leipzig) according to the instructions of the manufacturer. Demultiplexing of raw reads, adapter trimming and quality filtering was done, using the adapter sequences of the NEXTflex kit containing random bases next to the library insert. Mapping against the human reference genome (hg38) and miRbase reference sequences (v22) was done using Bowtie2 . Read counts were calculated with the R bioconductor package Rsamtools (http://bioconductor.org/packages/release/bioc/html/Rsamtools.html) and normalised us-ing the DESeq2 and EdgeR R bioconductor packages. 
wc: whole cells; exo: extracellular vesicles
DOI: 10.17632/t45r8yd6jd.1
title: BODY MASS AND PHYSICAL ACTIVITY IN AUTONOMIC FUNCTION MODULATION ON POST-COVID-19 CONDITION: AN OBSERVATIONAL SUBANALYSIS OF FIT-COVID STUDY

description: The harmful effects of coronavirus disease 2019 (COVID-19) can reach the autonomic nervous system (ANS) and  endothelial function. Therefore, the detrimental multiorgan effects of COVID-19 could be induced by deregulations in ANS that may persist after the acute SARS-CoV-2 infection. Additionally, investigating the differences in ANS response in overweight/obese, and physically inactive participants who had COVID-19 compared to those who did not have the disease is necessary. The aim of the study was to analyze the autonomic function of young adults after mild-to-moderate infection with COVID-19 and to assess whether body mass index (BMI) and levels of physical activity modulates autonomic function in participants with and without COVID-19. Patients previously infected with COVID-19 and healthy controls were recruited for this cross-sectional observational study.
DOI: 10.17632/fbgybykh6s.1
title: Binder-free MoN Nanofibers Catalysts for Flexible 2-electron Oxalate-based Li-CO2 Batteries with High Energy Efficiency

description: Data for Binder-free MoN Nanofibers Catalysts for Flexible 2-electron Oxalate-based Li-CO2 Batteries with High Energy Efficiency，contain XRD, SEM, TEM, XPS, Raman, DEMS，theoretical calculation results, and so on.
DOI: 10.17632/8xvkmtn58x.1
title: Noble Gases in Cloud Water

description: This is a companion dataset for the Water Resources Research paper "Anomalous Noble Gas Solubility in Liquid Cloud Water: Possible Implications for Noble Gas Temperatures and Cloud Physics" by Hall, Castro, Scholl, Amalberti and Gingrich. We show that noble gases in liquid cloud water droplets are not in solubility equilibrium with the atmosphere. This has implications for using noble gases to pinpoint groundwater recharge areas in fractured media within mountainous areas. A mechanism is proposed to explain both helium excess and heavy noble gas depletion. FogSoftware.pdf contains software used to model noble gas uptake into rain droplets. SuppInfoNGTTable.xlsx contains detailed noble gas data. SuppInfoPublished.pdf has supplementary equations and figures.
DOI: 10.17632/b84jk376c3.1
title: Dataset combining diurnal and seasonal measurements of vegetation fluorescence, reflectance and vegetation indices (VIs), with observations of photosynthetic function and CO2 dynamics for corn (Zea mays L.)

description: This dataset links measurements of leaf-level reflectance, active chlorophyll fluorescence, canopy reflectance and solar induced fluorescence (SIF) and a set of canopy vegetation indices (VIs such as PRI, NDVI, Clre, etc.) with eddy covariance measurements of gross ecosystem productivity (GEP). The dataset can be used to tests the hypothesis that canopy remote sensing observations can be used to detect the changes in reflectance and fluorescence at leaf level, and to develop approaches using SIF and VIs for monitoring vegetation photosynthetic function. The data were collected during the 2017 growing season on maize, using three automated systems (i.e., Moni-PAM, FloX and eddy covariance tower), filtered and collated to a common 30 minutes timestep. The raw data is provided to enable new processing and analysis. The dataset in this depository was used in three publications, where different researched hypothesis were tested. The dataset is described in details, and the measured and derived parameters are defined, in the accompanying "Data in brief' paper, where the published manuscripts are also listed.
DOI: 10.17632/hx357jc7b2.2
title: Income traps for different income groups: An empirical investigation 

description: This data is used to investigate the income traps for different income groups by checking the stationarity of per capita income time series with breaks, if they exist. The upper and lower-middle-income traps are reviewed for 25 upper and 12 lower-middle-income countries by employing the Augmented Dickey-Fuller, Zivot- Andrews with one break, and Lee-Strazicich with two breaks test procedures over 1987-2019. Besides, by predicting their income trends, the study tests whether if five newly high-income countries Chile, Mauritius, Panama, Romania, Uruguay can close the income gap with the advanced countries. 
The empirical findings show that 18 out of 25 upper-middle-income countries and 8 out of 12 lower-middle-income countries are in the upper and lower-income trap, respectively. China is the only country that gives the hope of becoming a part of the high-income group in the following years. The findings for seven upper-middle and four lower-middle countries are ambiguous. The empirical findings of the five newly high-income countries show that Panama is on the way to catching up with the high-income group. The same ambiguity applies for Romania and Mauritius, while Uruguay and 
Chile are likely to stay at the lowest level of the high-income group that can be described as the “lowerhigh-income trap.”
DOI: 10.17632/v3y85bnx5v.1
title: Graphene nanoplatelets as a substitute for carbon black in rubber compounds: evaluation of the reinforcement characteristics of the two nanofillers within a nitrile butadiene rubber matrix

description: Most application-oriented rubber compounds use carbon black (CB) as a reinforcing filler. However, since the discovery of graphene, the use of graphene-related materials such as graphene nanoplatelets (GNPs) for the production of composites has attracted the attention of both industry and academia. In this work, we evaluated the reinforcement characteristics of both CB and GNPs within a nitrile butadiene rubber (NBR) matrix. The use of GNPs has proven to be beneficial in terms of processing and the ultimate physicochemical properties, compared to CB. The tensile and tear properties of NBR after compounding with GNPs were enhanced to a larger extent compared to carbon black, while the curing times were smaller and the scorch times longer, indicating the advantages of GNPs during processing. Overall, the inherent properties of GNPs along with their geometrical characteristics lead to the production of high-performing, multifunctional rubber compounds that can replace their CB-filled counterparts and that can eventually be used in advanced applications.
DOI: 10.15468/trbwsq
title: Une espèce nouvelle de Fabaceae du Sahara occidental (Maroc): Lotus zemmouriensis

description: This dataset contains the digitized treatments in Plazi based on the original journal article Chatelain, Cyrille, Andrieu, Frédéric, Dobignard, Alain (2020): Une espèce nouvelle de Fabaceae du Sahara occidental (Maroc): Lotus zemmouriensis. Candollea 75 (2): 189-192, DOI: 10.15553/c2020v752a3
DOI: 10.17632/n3khm4pnsd.1
title: KMS-ENVRI

description: We reviewed a set of potential technologies during the development process of the ENVRI-KMS according to its requirement.  
The requirement analysis, technology review, system design, implementation, and demo of the ENVRI-KMS can be found here.
DOI: 10.17632/23drspzh3s.1
title: IP STING - Identification of new partners

description: To access STING function in absence of inflammation, given the tight interconnexion between metabolic and immune pathways, we questioned the impact of Sting ablation on metabolic parameters in vivo. Mice deficient for STING presented profound modifications of glucose management and body temperature. To identify the molecular mechanism through which Sting regulates metabolic homeostasis, we performed tandem-affinity purification of Flag- and HA-tagged Sting (F/HA-Sting) stably expressed in mouse embryonic fibroblasts (MEF) knockout for Sting (MEF Sting-/- ). Immunopurified material was analyzed by Mass Spectrometry to identify Sting protein partners.
DOI: 10.17632/j47wcv5gk3.1
title: Data for a comprehensive study of ketamine’s effect on neuronal plasticity following social isolation rearing in male and female rats

description: Raw and processed Fiber Volley-Input/Output Curve: Local Field Potential recordings (LFPs) in response to different stimulus intensity (0.2mA-0.65mA). Used to determine the stimulus for Long-Term Potentiation (LTP) and Paired Pulse facilitation (PPF). LFPs were obtained in response to a stimulus inducing 50-60% of maximum response. LTP: A time series of LFPs pre- and post- high frequency stimulation (Two trains of 50 pulses at 100Hz 30s apart) PPF: Local Field Potential recordings following two monophasic pulses at 3 different intervals (20ms,50ms,100ms)
DOI: 10.6084/m9.figshare.17052803
title: PWS Emergence in Mexico

description: Raw data for logistic regression on PHS emergence and persistence.
DOI: 10.17632/hxch8htz84.1
title: Mouse Locus Coeruleus Noradrenergic Neurons Project

description: This data is for ' Chemogenetic Stimulation of Tonic Locus Coeruleus Activity Strengthens the Default Mode Network'.
DOI: 10.17632/nd64f8zchj.1
title: Microbiome and Metabolome Profiles of High Screen Time in a Cohort of Healthy College Students

description: As screens are increasingly integrated into every facet of modern life, there is growing concern over the potential effects of high screen time. Previous studies have largely utilized self-report data on mood and behavioral aspects of screen time. In this study, we explored the fecal microbiome and metabolome of a diverse group of 60 college students, classified by high (≥ 75 min/day) or low (0-75 min/day) self-reported screen time using 16S rRNA amplicon sequencing, targeted liquid chromatography-tandem mass spectrometry, and targeted short-chain fatty acid detection using gas chromatography-mass spectrometry. Several key taxa and metabolites were significantly altered between groups and found to be highly co-occurrent. Pathway and enzyme enrichment analyses indicated widespread dysfunction of amino acid metabolism. High screen time was also predicted to be associated with type I diabetes, obesity, chronic fatigue syndrome, and various manifestations of inflammatory bowel. These results provide a data-driven hypothesis for future experimental research.
DOI: 10.17632/9dhvmhy98s.1
title: A recurrent chromosomal inversion suffices for driving escape from oncogene-induced senescence via subTAD reorganization. Zampetidis et al, Mol Cell.

description: unprocessed and uncompressed imaging data (microscopy, gels and blots)
DOI: 10.17632/zvr4jwvcrc.1
title: Celeb_A dataset with male and female separate

description: Demo Dataset
DOI: 10.17632/hrhy2fb7zn.1
title: Data from: The meta-gut: community coalescence of animal gut and environmental microbiomes

description: This is the data and R code necessary to reproduce the findings in the manuscript, "The meta-gut: community coalescence of animal gut and environmental microbiomes."

Hippo pool biogeochemistry and fecal and pool water microbial communities were examined through field sampling and an experiment. Sequencing using 16S RNA methods revealed that the active microbial communities in hippo pools that received high inputs of hippo feces are more similar to the hippo gut microbiome than other nearby aquatic environments. The overlap between the microbiomes of the hippo gut and the waters into which they excrete therefore constitutes a meta-gut system with potentially strong influence on the biogeochemistry of pools and downstream waters. We propose that the meta-gut may be present where other species congregate in high densities, particularly in aquatic environments, and share gut microbiota between individuals.
DOI: 10.17632/t4hzcz4tx4.1
title: Top-ranked Mixed Linear Models for the nutritional and oxidative status of Rufous-collared sparrow in parks and island hills of Santiago, Chile.

description: Supplementary data:

Table S.1.  Top-ranked Mixed Linear Models for the nutritional and oxidative status of Rufous-collared sparrow in parks of Santiago, Chile. For each model, it is shown: AICc = Akaike´s Information Criterion corrected for small sample sizes, ΔAICc = difference between the AICc of the current model and the AIC in the best model (lowest AICc), K = number of parameters.

Table S.2. Top-ranked Mixed Linear Models for the nutritional and oxidative status of Rufous-collared sparrow in island hills of Santiago, Chile. For each model, it is shown: AICc = Akaike´s Information Criterion corrected for small sample sizes, ΔAICc = difference between the AICc of the current model and the AIC in the best model (lowest AICc), K = number of parameters.
DOI: 10.17632/t3yb6fy69b.1
title: Association of the time of trastuzumab exposition with outcome in breast cancer patients

description: Shorter times of trastuzumab exposition (<1 year) could protect from disease progression in breast cancer patients. Survival analysis of continuous predictor was used to obtain optimal cut-offs regarding DMFS, DFS, and OS.
DOI: 10.5281/zenodo.5715407
title: Preliminary neutron data for cryotrapping peroxide in the active site of human mitochondrial manganese superoxide dismutase crystals for neutron diffraction

description: The files are preliminary refined neutron coordinates and data on a cryotrapped peroxo species at the active site of human manganese superoxide dismutase crystals.
DOI: 10.17632/sg3cmzcnft.2
title: ACCESO A LA ATENCIÓN SANITARIA MEDIANTE SEGUROS DE SALUD COMUNITARIOS ENTRE MIGRANTES DE SENEGAL

description: Particpants characteristics and Transcripts of Interviews and Focus Group Discussion
DOI: 10.5281/zenodo.5715406
title: Preliminary neutron data for cryotrapping peroxide in the active site of human mitochondrial manganese superoxide dismutase crystals for neutron diffraction

description: The files are preliminary refined neutron coordinates and data on a cryotrapped peroxo species at the active site of human manganese superoxide dismutase crystals.
DOI: 10.17632/3d95jhy5px.1
title: Community-Based Delivery Model for HIV Pre-exposure Prophylaxis Among Bar Patrons in Rural South Africa 

description: South Africa, home to the world’s largest HIV epidemic, has made great strides in improving access to HIV services, but specific groups, particularly young men, remain difficult to engage in the HIV care cascade. Congregate settings where alcohol is served, known as shebeens, are an ideal place to engage young people for HIV testing, treatment, and prevention including pre-exposure prophylaxis (PrEP). Here we characterize the uptake of PrEP in shebeen patrons and explore the effect of alcohol consumption on PrEP uptake by piloting a community-based delivery model. In the rural Kwazulu-Natal province (KZN) of South Africa, a field team made up of all men offered screenings outside of shebeens. Screenings included rapid HIV testing and Alcohol Use Disorder Identification Test (AUDIT).  Participants who tested negative for HIV were offered PrEP as once daily oral tenofovir disoproxil fumarate/emtricitabine. Predictors of uptake were identified and short term retention was characterized. Among 229 approached, 162 underwent screening, and 136 (84%) were eligible for PrEP. Among those eligible, 37 (27%) completed clinical evaluation and initiated PrEP. Among PrEP initiators, 91.9% were men, median age was 26.0 years (Interquartile range (IQR) 21-31), 32.4% were employed, 18.9% had running water, and 70.3% had AUDIT scores indicating hazardous drinking. Among 37 initiators, 25 (68%) were retained at 1 month, and 19 (51%) were retained at 4 months. Independent predictors of PrEP uptake among all bar patrons, and only men (108 screened, 34 initiators), included younger age (OR 0.92 (0.88-0.97) and lifetime number of sexual partners (OR 1.07 (1.02-1.13).  In conclusion, community-based PrEP delivery after engagement at shebeens in rural South Africa is a feasible and novel approach to reach a traditionally difficult-to-engage population, particularly young men. In this small sample, sexual risk behaviours predicted PrEP uptake. Hazardous drinking was not a barrier to PrEP initiation.
DOI: 10.25345/c5q28r
title: MassIVE MSV000088418 - C. testosteroni aromatic compound metabolism
title: Data comparing protein expression during growth of Comamonas testosteroni Kf1 on succinate with growth on 3 aromatic substrates (vanillate, terephthalate, 4-hydroxybenzoate). Quantification by diDO-IPTL (Waldbauer et al. 2017 Analytical Chemistry).
DOI: 10.17632/fvnbh855cr.2
title: Quantifying Lake-Aquifer Water Exchange: The Case of Lake Urmia, Iran

description: The supplementary data file including time-series of in-situ (ground) and remotely-sensed monthly data of Lake Urmia located in northwest of Iran. In-situ datasets including precipitation over lake, surface inflow into lake, and groundwater level in 14 adjacent aquifers to the lake. Remotely-sensed data sets including evaporation from the lake and water extend area of the lake.
DOI: 10.17632/k2kbt5gs6y.1
title: Rapid characterization of spike variants via mammalian cell surface display_Javanmardi et al.

description: Immunostaining_Javanmardi et al. = Fluorescent microscopy images used for Figure 1B and Figures S1A and S1B

Western Blot_Javanmardi et al. = Western blot images used for Figure S1D

Spike Display measurements used in manuscript = Data S1

nsEM_Javanmardi et al. = nsEM data used for Figure 1C and Figure S1C
DOI: 10.17632/yydcs4sns9.1
title: Pneumoconiosis stages

description: Appendix A is meta-analysis results for subgroups by Stata.
Appendix B is the economic and medical data extracted from the statistical yearbooks of Chinese provinces.
DOI: 10.17632/bgkxcmjcb5.2
title: Dataset on the Measurement of College Student Entrepreneurship Skills in Indonesia

description: This dataset is used to develop student college entrepreneurship skills instrument. Data analysis was carried out by measuring the quality and practicality of the instrument through various analyzes, namely Content validation using the Aiken V Index, Construct Validity using Exploratory Factor Analysis (EFA) and Confirmatory Factor Analysis (CFA), Reliability using Crobanch's Alpha, and Practicality Testing using measurement instruments.
DOI: 10.17632/bpdgbtf6k7.3
title: The simulation dataset of each model for the circle antipode experiment

description: This dataset include trajectory data, video data and figure data produced by the different model (including the traditional social force model, the Voronoi-based detour social force model and double-layer detour decision model) simulate the circle antipode  experiment.