cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/tyscxph53y.1
title: Distinct neural bases of subcomponents of the attentional blink

description: 1. Grand_Contingency_table.mat -- This file has all 24 participant's behavioral response dataset in 3*3 contingency table format for 5 lags. Format - structure; one high contrast and one low contrast file; each file - 3*3*5*24. 2. Grand_psychophysical_params_table.mat -- This file has all 24 participant's psychophysical parameter dataset for 5 lags. Format - structure; 7 parameters obtained from the model; each file - 5*24. 3. n2p_ERP_all_lag_occ_par.mat and p3_ERP_all_lag_par.mat -- These two files has the data for these two ERP components for 18 EEG participants for 5 lags - n2p in occ-par electrodes and p3 in parietal electrodes. Format : double, each file 251*18*5. 4. Early_timewindow_ERP_peak_measure_all_electrode.mat and Late_timewindow_ERP_peak_measure_all_electrode.mat -- These two files have ERP components quantified as peak measure in early (150 - 300ms) and late (300-550 ms) for all electrodes for 18 participants and for 5 lags. Format : double, each file 128*90. (18*5 =90 ) 5. btw_cls_detection_discrimination_distances_lag_wise.mat -- This file contains between-class distance metrics. It has 2 1x5 cell structures, one for distances in detection dimension and the other for discrimination dimension for 5 different lags between the categories. Each element in this cell structure has distance values for every time point and from 18 subjects. This file also contains the time variable with 251 time points. 6. Fronto_Parietal_Coherence_taperParams_3_5_left_left.mat -- This file contains five coherency variables for each lag. Each variable is a subject x time x frequency dimension (i.e., 18 x 59 x 82). It also has time (59 time points) and frequency (82 frequency values) variables. 7. For_correlations_between_metrics -- This file contains multiple .mat variables (quantified coherence, quantified distance and d' for 18 subjects and for 5 lags; format : 90*1) for correlation analysis.
DOI: 10.6084/m9.figshare.23208105.v1
title: Additional file 10 of Genome-wide identification and expression analysis of the cyclic nucleotide-gated ion channel (CNGC) gene family in Saccharum spontaneum

description: Additional file 10: Supplementary Table 5. The expression pattern of SsCNGCs based on FPKM during the circadian rhythms.
DOI: 10.6084/m9.figshare.5913148
title: Piperlongumine restores the balance of autophagy and apoptosis by increasing BCL2 phosphorylation in rotenone-induced Parkinson disease models

description: Parkinson disease (PD) is the second most common neurodegenerative disorder after Alzheimer disease and is caused by genetics, environmental factors and aging, with few treatments currently available. Apoptosis and macroautophagy/autophagy play critical roles in PD pathogenesis; as such, modulating their balance is a potential treatment strategy. BCL2 (B cell leukemia/lymphoma 2) is a key molecule regulating this balance. Piperlongumine (PLG) is an alkaloid extracted from <i>Piper longum</i> L. that has antiinflammatory and anticancer effects. The present study investigated the protective effects of PLG in rotenone-induced PD cell and mouse models. We found that PLG administration (2 and 4 mg/kg) for 4 wk attenuated motor deficits in mice and prevented the loss of dopaminergic neurons in the substantia nigra induced by oral administration of rotenone (10 mg/kg) for 6 wk. PLG improved cell viability and enhanced mitochondrial function in primary neurons and SK-N-SH cells. These protective effects were exerted via inhibition of apoptosis and induction of autophagy through enhancement of BCL2 phosphorylation at Ser70. These results demonstrate that PLG exerts therapeutic effects in a rotenone-induced PD models by restoring the balance between apoptosis and autophagy. <b>Abbreviations: </b> 6-OHDA, 6-hydroxydopamine; ACTB, actin, beta; BafA1, bafilomycin A<sub>1</sub>; BAK1, BCL2-antagonist/killer 1; BAX, BCL2-associated X protein; BCL2, B cell leukemia/lymphoma2; BECN1, Beclin 1, autophagy related; CoQ10, coenzyme Q<sub>10</sub>; COX4I1/COX IV, cytochrome c oxidase subunit 4I1; CsA, cyclosporine A; ED50, 50% effective dose; FITC, fluorescein isothiocyanate; GFP, green fluorescent protein; HPLC, high-performance liquid chromatography; JC-1, tetraethylbenz-imidazolylcarbocyanine iodide; LC3, microtubule-associated protein 1 light chain3; LC-MS/MS, liquid chromatography-tandem mass spectrometry; LDH, lactate dehydrogenase; l-dopa, 3, 4-dihydroxyphenyl-l-alanine; MAPK8/JNK1, mitogen-activated protein kinase 8; MMP, mitochondrial membrane potential; mPTP, mitochondrial permeability transition pore; mRFP, monomeric red fluorescent protein; MPTP, 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine; MTT, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide; NFE2L2/NRF2, nuclear factor, erythroid derived 2, like 2; PD, Parkinson disease; PLG, piperlongumine; pNA, p-nitroanilide; PI, propidium iodide; PtdIns3K, phosphatidylinositol 3-kinase; PtdIns3P, phosphatidylinositol-3-phosphate; PTX, paclitaxel; Rap, rapamycin; SQSTM1/p62, sequestosome 1; TH, tyrosine hydroxylase; TUNEL, terminal deoxynucleotidyl transferase dUTP nick end labeling; WIPI2, WD repeat domain, phosphoinositide interacting 2; ZFYVE1/DFCP1, zinc finger, FYVE domain containing 1.
DOI: 10.6084/m9.figshare.21117179
title: Additional file 3 of The impact of clinical pharmacist-physician communication on reducing drug-related problems: a mixed study design in a tertiary teaching Hospital in Xinjiang, China

description: Additional file 3.
DOI: 10.6084/m9.figshare.5913148.v1
title: Piperlongumine restores the balance of autophagy and apoptosis by increasing BCL2 phosphorylation in rotenone-induced Parkinson disease models

description: Parkinson disease (PD) is the second most common neurodegenerative disorder after Alzheimer disease and is caused by genetics, environmental factors and aging, with few treatments currently available. Apoptosis and macroautophagy/autophagy play critical roles in PD pathogenesis; as such, modulating their balance is a potential treatment strategy. BCL2 (B cell leukemia/lymphoma 2) is a key molecule regulating this balance. Piperlongumine (PLG) is an alkaloid extracted from <i>Piper longum</i> L. that has antiinflammatory and anticancer effects. The present study investigated the protective effects of PLG in rotenone-induced PD cell and mouse models. We found that PLG administration (2 and 4 mg/kg) for 4 wk attenuated motor deficits in mice and prevented the loss of dopaminergic neurons in the substantia nigra induced by oral administration of rotenone (10 mg/kg) for 6 wk. PLG improved cell viability and enhanced mitochondrial function in primary neurons and SK-N-SH cells. These protective effects were exerted via inhibition of apoptosis and induction of autophagy through enhancement of BCL2 phosphorylation at Ser70. These results demonstrate that PLG exerts therapeutic effects in a rotenone-induced PD models by restoring the balance between apoptosis and autophagy. <b>Abbreviations: </b> 6-OHDA, 6-hydroxydopamine; ACTB, actin, beta; BafA1, bafilomycin A<sub>1</sub>; BAK1, BCL2-antagonist/killer 1; BAX, BCL2-associated X protein; BCL2, B cell leukemia/lymphoma2; BECN1, Beclin 1, autophagy related; CoQ10, coenzyme Q<sub>10</sub>; COX4I1/COX IV, cytochrome c oxidase subunit 4I1; CsA, cyclosporine A; ED50, 50% effective dose; FITC, fluorescein isothiocyanate; GFP, green fluorescent protein; HPLC, high-performance liquid chromatography; JC-1, tetraethylbenz-imidazolylcarbocyanine iodide; LC3, microtubule-associated protein 1 light chain3; LC-MS/MS, liquid chromatography-tandem mass spectrometry; LDH, lactate dehydrogenase; l-dopa, 3, 4-dihydroxyphenyl-l-alanine; MAPK8/JNK1, mitogen-activated protein kinase 8; MMP, mitochondrial membrane potential; mPTP, mitochondrial permeability transition pore; mRFP, monomeric red fluorescent protein; MPTP, 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine; MTT, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide; NFE2L2/NRF2, nuclear factor, erythroid derived 2, like 2; PD, Parkinson disease; PLG, piperlongumine; pNA, p-nitroanilide; PI, propidium iodide; PtdIns3K, phosphatidylinositol 3-kinase; PtdIns3P, phosphatidylinositol-3-phosphate; PTX, paclitaxel; Rap, rapamycin; SQSTM1/p62, sequestosome 1; TH, tyrosine hydroxylase; TUNEL, terminal deoxynucleotidyl transferase dUTP nick end labeling; WIPI2, WD repeat domain, phosphoinositide interacting 2; ZFYVE1/DFCP1, zinc finger, FYVE domain containing 1.
DOI: 10.17632/grncwj4jyc.1
title: Effects of a glyphosate-based herbicide (GBH) on the behaviour of male Poecilia reticulata (Cyprinodontiformes: Poeciliidae)

description: Data on the effects of GBH on fish behaviour
DOI: 10.6084/m9.figshare.21117320
title: Additional file 1 of NudCD1 as a prognostic marker in colorectal cancer and its role in the upregulation of cellular spindle assembly checkpoint genes and LIS1 pathways

description: Additional file 1.
DOI: 10.6084/m9.figshare.21117320.v1
title: Additional file 1 of NudCD1 as a prognostic marker in colorectal cancer and its role in the upregulation of cellular spindle assembly checkpoint genes and LIS1 pathways

description: Additional file 1.
DOI: 10.6084/m9.figshare.25205729
title: Number and frequency of visits

description: Number and frequency of visits to<i> Pyrus bourgaeana</i> trees in southern Spain. The number of visits has been added to this file for first time.
DOI: 10.6084/m9.figshare.23208073
title: Additional file 1 of Clinical characteristics and antibiotic resistance profile of invasive MRSA infections in newborn inpatients: a retrospective multicenter study from China

description: Supplementary Material 1
DOI: 10.34740/kaggle/dsv/7611379
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.5517/ccdc.csd.cc2g35vm
title: CCDC 2267180: Experimental Crystal Structure Determination

description: Related Article: ZHAO xiaojing|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fqf7v
title: CCDC 2255877: Experimental Crystal Structure Determination

description: Related Article: Xiqing Wang|2023|CSD Communication|||
description: Related Article: Qian Ma, Wenhao Shan, Xuan Chu, Haochen Xu, Ziyi Chen, Fudong Li, Jie-Lou Liao, Chao He, Wen-Ju Bai, Xiqing Wang|2023|Nat. Synth.|3|123|doi:10.1038/s44160-023-00427-y
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gj49g
title: CCDC 2279625: Experimental Crystal Structure Determination

description: Related Article: Claire Casaday, Cristin Juda, Ryan Clarke, Tieyan Chang, Yu-Sheng Chen, Shao Liang Zheng, Theodore Betley|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gjc9p
title: CCDC 2279842: Experimental Crystal Structure Determination

description: Related Article: Claire Casaday, Cristin Juda, Ryan Clarke, Tieyan Chang, Yu-Sheng Chen, Shao Liang Zheng, Theodore Betley|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gjgvb
title: CCDC 2279952: Experimental Crystal Structure Determination

description: Related Article: Tomohiro Ishizaka, Yuji Nakayama, Taichiro Touge, Yamato Yuki, Kazuhiko Matsumura, Taiga Yurino, Takeshi Ohkuma|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gjgwc
title: CCDC 2279953: Experimental Crystal Structure Determination

description: Related Article: Tomohiro Ishizaka, Yuji Nakayama, Taichiro Touge, Yamato Yuki, Kazuhiko Matsumura, Taiga Yurino, Takeshi Ohkuma|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.21641763
title: Simultaneous Decorrelation of Matrix Time Series

description: We propose a contemporaneous bilinear transformation for a <i>p</i> × <i>q</i> matrix time series to alleviate the difficulties in modeling and forecasting matrix time series when <i>p</i> and/or <i>q</i> are large. The resulting transformed matrix assumes a block structure consisting of several small matrices, and those small matrix series are uncorrelated across all times. Hence, an overall parsimonious model is achieved by modeling each of those small matrix series separately without the loss of information on the linear dynamics. Such a parsimonious model often has better forecasting performance, even when the underlying true dynamics deviates from the assumed uncorrelated block structure after transformation. The uniform convergence rates of the estimated transformation are derived, which vindicate an important virtue of the proposed bilinear transformation, that is, it is technically equivalent to the decorrelation of a vector time series of dimension max(<i>p</i>, <i>q</i>) instead of <i>p</i> × <i>q</i>. The proposed method is illustrated numerically via both simulated and real data examples. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.21641763.v2
title: Simultaneous Decorrelation of Matrix Time Series

description: We propose a contemporaneous bilinear transformation for a <i>p</i> × <i>q</i> matrix time series to alleviate the difficulties in modeling and forecasting matrix time series when <i>p</i> and/or <i>q</i> are large. The resulting transformed matrix assumes a block structure consisting of several small matrices, and those small matrix series are uncorrelated across all times. Hence, an overall parsimonious model is achieved by modeling each of those small matrix series separately without the loss of information on the linear dynamics. Such a parsimonious model often has better forecasting performance, even when the underlying true dynamics deviates from the assumed uncorrelated block structure after transformation. The uniform convergence rates of the estimated transformation are derived, which vindicate an important virtue of the proposed bilinear transformation, that is, it is technically equivalent to the decorrelation of a vector time series of dimension max(<i>p</i>, <i>q</i>) instead of <i>p</i> × <i>q</i>. The proposed method is illustrated numerically via both simulated and real data examples. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.23208099.v1
title: Additional file 8 of Genome-wide identification and expression analysis of the cyclic nucleotide-gated ion channel (CNGC) gene family in Saccharum spontaneum

description: Additional file 8: Supplementary Table 3. The detailed distribution of cis-regulatory elements in the promoters of SsCNGCs.
DOI: 10.6084/m9.figshare.23208105
title: Additional file 10 of Genome-wide identification and expression analysis of the cyclic nucleotide-gated ion channel (CNGC) gene family in Saccharum spontaneum

description: Additional file 10: Supplementary Table 5. The expression pattern of SsCNGCs based on FPKM during the circadian rhythms.
DOI: 10.6084/m9.figshare.23208096
title: Additional file 7 of Genome-wide identification and expression analysis of the cyclic nucleotide-gated ion channel (CNGC) gene family in Saccharum spontaneum

description: Additional file 7: Supplementary Table 2. Detailed physiological and biochemical information of SsCNGC genes and their alleles.
DOI: 10.6084/m9.figshare.25062860
title: An independent origin of an annual life cycle in a North American killifish species

description: Datasets accompanying the article: An independent origin of an annual life cycle in a North American killifish species (Biological Journal of the Linnean Society).RAxML_bipartitions = Killifish RAxML tree with bootstrap valuesbinary_backbone = Backbone tree, taken from Thompson et al. (2023)infile = DNA alignment file. 312 taxa. 10961 bp. part = Text file indicating DNA data partitions
DOI: 10.6084/m9.figshare.25062860.v1
title: An independent origin of an annual life cycle in a North American killifish species

description: Datasets accompanying the article: An independent origin of an annual life cycle in a North American killifish species (Biological Journal of the Linnean Society).RAxML_bipartitions = Killifish RAxML tree with bootstrap valuesbinary_backbone = Backbone tree, taken from Thompson et al. (2023)infile = DNA alignment file. 312 taxa. 10961 bp. part = Text file indicating DNA data partitions
DOI: 10.6084/m9.figshare.24460882
title: ShetlandsUAVmetry: Deception Island Part 1

description: The data has been structured according to the study sites, encompassing two top-level folders named “Deception Island” and “Livingston Island”, respectively. Within the main top-level folders, different subfolders named after the flight sites contain the photogrammetric products. This part includes the following datasets:
- 20220123_D_BAEGDC
- 20220124_D_CRATERLAKE
- 20220126_D_VAPOURCOL
DOI: 10.6084/m9.figshare.24463096
title: ShetlandsUAVmetry: Deception Island Part 3

description: The data has been structured according to the study sites, encompassing two top-level folders named “Deception Island” and “Livingston Island”, respectively. Within the main top-level folders, different subfolders named after the flight sites contain the photogrammetric products. This part includes the following datasets:
- 20220201_D_FUMAROLEBAY
- 20220201_D_TELEPHONEBAY
- 20220205_D_BAILYHEAD
DOI: 10.6084/m9.figshare.24463270.v1
title: ShetlandsUAVmetry: Livingston Island Part 1

description: The data has been structured according to the study sites, encompassing two top-level folders named “Deception Island” and “Livingston Island”, respectively. Within the main top-level folders, different subfolders named after the flight sites contain the photogrammetric products. This part includes the following datasets:
- 20220211_L_HANNAHPOINT
- 20220212_L_BAEJCI
- 20220214_L_ARGENTINIANCOVE
- 20220214_L_JOHNSONSDOCK
DOI: 10.6084/m9.figshare.24463504.v1
title: ShetlandsUAVmetry: Livingston Island Part 2

description: The data has been structured according to the study sites, encompassing two top-level folders named “Deception Island” and “Livingston Island”, respectively. Within the main top-level folders, different subfolders named after the flight sites contain the photogrammetric products. This part includes the following datasets:
- 20220215_L_SALLYROCKS
- 20220216_L_JOHNSONSDOCK
- 20220225_L_HANNAHPOINT
- 20220228_L_HURDPENINSULA
DOI: 10.6084/m9.figshare.24460882.v1
title: ShetlandsUAVmetry: Deception Island Part 1

description: The data has been structured according to the study sites, encompassing two top-level folders named “Deception Island” and “Livingston Island”, respectively. Within the main top-level folders, different subfolders named after the flight sites contain the photogrammetric products. This part includes the following datasets:
- 20220123_D_BAEGDC
- 20220124_D_CRATERLAKE
- 20220126_D_VAPOURCOL
DOI: 10.6084/m9.figshare.24461044.v1
title: ShetlandsUAVmetry: Deception Island Part 2

description: The data has been structured according to the study sites, encompassing two top-level folders named “Deception Island” and “Livingston Island”, respectively. Within the main top-level folders, different subfolders named after the flight sites contain the photogrammetric products. This part includes the following datasets:
- 20220129_D_WHALERSBAY
- 20220130_D_PENDULUMCOVE
- 20220131_D_MURATURE
DOI: 10.6084/m9.figshare.24463096.v1
title: ShetlandsUAVmetry: Deception Island Part 3

description: The data has been structured according to the study sites, encompassing two top-level folders named “Deception Island” and “Livingston Island”, respectively. Within the main top-level folders, different subfolders named after the flight sites contain the photogrammetric products. This part includes the following datasets:
- 20220201_D_FUMAROLEBAY
- 20220201_D_TELEPHONEBAY
- 20220205_D_BAILYHEAD
DOI: 10.6084/m9.figshare.24461044
title: ShetlandsUAVmetry: Deception Island Part 2

description: The data has been structured according to the study sites, encompassing two top-level folders named “Deception Island” and “Livingston Island”, respectively. Within the main top-level folders, different subfolders named after the flight sites contain the photogrammetric products. This part includes the following datasets:
- 20220129_D_WHALERSBAY
- 20220130_D_PENDULUMCOVE
- 20220131_D_MURATURE
DOI: 10.6084/m9.figshare.24463270
title: ShetlandsUAVmetry: Livingston Island Part 1

description: The data has been structured according to the study sites, encompassing two top-level folders named “Deception Island” and “Livingston Island”, respectively. Within the main top-level folders, different subfolders named after the flight sites contain the photogrammetric products. This part includes the following datasets:
- 20220211_L_HANNAHPOINT
- 20220212_L_BAEJCI
- 20220214_L_ARGENTINIANCOVE
- 20220214_L_JOHNSONSDOCK
DOI: 10.6084/m9.figshare.24463504
title: ShetlandsUAVmetry: Livingston Island Part 2

description: The data has been structured according to the study sites, encompassing two top-level folders named “Deception Island” and “Livingston Island”, respectively. Within the main top-level folders, different subfolders named after the flight sites contain the photogrammetric products. This part includes the following datasets:
- 20220215_L_SALLYROCKS
- 20220216_L_JOHNSONSDOCK
- 20220225_L_HANNAHPOINT
- 20220228_L_HURDPENINSULA
DOI: 10.6084/m9.figshare.24463858
title: Dataset Processing Template (Pix4D)

description: Pix4D template employed for the photogrammetric processing.
DOI: 10.6084/m9.figshare.24463618
title: ShetlandsUAVmetry: Livingston Island Part 3

description: The data has been structured according to the study sites, encompassing two top-level folders named “Deception Island” and “Livingston Island”, respectively. Within the main top-level folders, different subfolders named after the flight sites contain the photogrammetric products. This part includes the following datasets:
- 20220302_L_MIERSBLUFF
- 20220305_L_ARGENTINIANCOVE
- 20220308_L_MIERSBLUFF
- 20220317_L_CHARRUARIDGE
DOI: 10.6084/m9.figshare.24463858.v1
title: Dataset Processing Template (Pix4D)

description: Pix4D template employed for the photogrammetric processing.