cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25989/k04a-hq17
title: Materials Experiment and Analysis Database: X-ray diffraction measurements 3 files performed on plate containing Mn,Fe,Zn,Ar,O annealed at 550.0C to add O on 2019-04-20 from Run 20190420.155418

description: This record is a component of the Materials Experiment and
Analysis Database (MEAD). It contains raw data and metadata from millions 
of materials synthesis and characterization experiments, as well as the 
analysis and distillation of that data into property and performance 
metrics. The unprecedented quantity and diversity of experimental data 
are searchable by experiment and analysis attributes generated by both 
researchers and data processing software.

description: Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/k04a-hq17/&lt;/p&gt;</p>20190420.155418.copied-20190507220522621PDT.zip 0.0 GB 
        <p>&lt;a role="button" class="ui compact mini button" href="https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/k04a-hq17/20190420.155418.copied-20190507220522621PDT.zip"
        &gt; &lt;i class="download icon"&gt;&lt;/i&gt; Download &lt;/a&gt;</p>&lt;/p&gt;</p>
DOI: 10.25989/k04d-wq27
title: Materials Experiment and Analysis Database: Sample imaging measurements 2166 files performed on plate containing Ga,Sn,Gd,Cu,Co,Mn annealed at 450.0C to add O on 2019-03-04 from Run 20190304.143337

description: This record is a component of the Materials Experiment and
Analysis Database (MEAD). It contains raw data and metadata from millions 
of materials synthesis and characterization experiments, as well as the 
analysis and distillation of that data into property and performance 
metrics. The unprecedented quantity and diversity of experimental data 
are searchable by experiment and analysis attributes generated by both 
researchers and data processing software.

description: Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/k04d-wq27/&lt;/p&gt;</p>20190304.143337.copied-20190304220338731PST.zip 0.02 GB 
        <p>&lt;a role="button" class="ui compact mini button" href="https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/k04d-wq27/20190304.143337.copied-20190304220338731PST.zip"
        &gt; &lt;i class="download icon"&gt;&lt;/i&gt; Download &lt;/a&gt;</p>&lt;/p&gt;</p>
DOI: 10.25989/k072-8856
title: Materials Experiment and Analysis Database: X-ray diffraction measurements 7 files performed on plate containing Fe,Bi,Ar annealed at 610.0C to add O on 2020-08-02 from Run 20200802.113021

description: This record is a component of the Materials Experiment and
Analysis Database (MEAD). It contains raw data and metadata from millions 
of materials synthesis and characterization experiments, as well as the 
analysis and distillation of that data into property and performance 
metrics. The unprecedented quantity and diversity of experimental data 
are searchable by experiment and analysis attributes generated by both 
researchers and data processing software.

description: Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/k072-8856/&lt;/p&gt;</p>20200802.113021.copied-20210325220840233PDT.zip 0.01 GB 
        <p>&lt;a role="button" class="ui compact mini button" href="https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/k072-8856/20200802.113021.copied-20210325220840233PDT.zip"
        &gt; &lt;i class="download icon"&gt;&lt;/i&gt; Download &lt;/a&gt;</p>&lt;/p&gt;</p>
DOI: 10.25989/k0bp-wr11
title: Materials Experiment and Analysis Database: X-ray diffraction measurements 3 files performed on plate containing W,Fe,Ar annealed at 610.0C to add O on 2018-02-28 from Run 20180228.220230

description: This record is a component of the Materials Experiment and
Analysis Database (MEAD). It contains raw data and metadata from millions 
of materials synthesis and characterization experiments, as well as the 
analysis and distillation of that data into property and performance 
metrics. The unprecedented quantity and diversity of experimental data 
are searchable by experiment and analysis attributes generated by both 
researchers and data processing software.

description: Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/k0bp-wr11/&lt;/p&gt;</p>20180228.220230.copied-20190507220522621PDT.zip 0.0 GB 
        <p>&lt;a role="button" class="ui compact mini button" href="https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/k0bp-wr11/20180228.220230.copied-20190507220522621PDT.zip"
        &gt; &lt;i class="download icon"&gt;&lt;/i&gt; Download &lt;/a&gt;</p>&lt;/p&gt;</p>
DOI: 10.25989/k0ez-1b85
title: Materials Experiment and Analysis Database: X-ray diffraction measurements 2 files performed on plate containing Cu,Ca,V,Ar,O annealed at 550.0C to add O on 2018-02-27 from Run 20180227.113913

description: This record is a component of the Materials Experiment and
Analysis Database (MEAD). It contains raw data and metadata from millions 
of materials synthesis and characterization experiments, as well as the 
analysis and distillation of that data into property and performance 
metrics. The unprecedented quantity and diversity of experimental data 
are searchable by experiment and analysis attributes generated by both 
researchers and data processing software.

description: Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/k0ez-1b85/&lt;/p&gt;</p>20180227.113913.copied-20181017220338222PDT.zip 0.0 GB 
        <p>&lt;a role="button" class="ui compact mini button" href="https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/k0ez-1b85/20180227.113913.copied-20181017220338222PDT.zip"
        &gt; &lt;i class="download icon"&gt;&lt;/i&gt; Download &lt;/a&gt;</p>&lt;/p&gt;</p>
DOI: 10.25989/k0s2-jj38
title: Materials Experiment and Analysis Database: External collaboration measurements 204 files performed on plate containing La,Mn,Ca,Ar,O annealed at Material library with La,Mn,Ca,Ar,O deposited by PVD on 2018-04-16 from Run 20180416.195622

description: This record is a component of the Materials Experiment and
Analysis Database (MEAD). It contains raw data and metadata from millions 
of materials synthesis and characterization experiments, as well as the 
analysis and distillation of that data into property and performance 
metrics. The unprecedented quantity and diversity of experimental data 
are searchable by experiment and analysis attributes generated by both 
researchers and data processing software.

description: Files available via S3 at https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/k0s2-jj38/&lt;/p&gt;</p>20180416.195622.copied-20190719220941956PDT.zip 0.85 GB 
        <p>&lt;a role="button" class="ui compact mini button" href="https://renc.osn.xsede.org/ini210004tommorrell/0_gregoire/k0s2-jj38/20180416.195622.copied-20190719220941956PDT.zip"
        &gt; &lt;i class="download icon"&gt;&lt;/i&gt; Download &lt;/a&gt;</p>&lt;/p&gt;</p>
DOI: 10.6084/m9.figshare.12853691
title: Discovery of novel fungal species and pathogens on bat carcasses in a cave in Yunnan Province, China

description: Virulent infectious fungal diseases, in natural and managed landscapes, are increasing. Fungal diseases in humans, animals and plants have caused die-off and extinction events and have become a threat to food security. A caving expedition in Yunnan Province, China, revealed two bat carcasses covered in fungal mycelia. Eleven fungal isolates were obtained from these bat carcasses, and morphological observations and multigene phylogenetic analyses revealed they were <i>Fusarium incarnatum, Mucor hiemalis</i> and <i>Trichoderma harzianum</i> and four new species, <i>Mortierella rhinolophicola, M. multispora, M. yunnanensis</i> and <i>Neocosmospora pallidimors</i>. One of the more alarming findings is that a number of infections related to <i>Neocosmospora</i>, previously associated with human and animal mycotoxicoses, are reported to be increasing, and here we present a new species from this genus, isolated from dead bats. Due to the ecosystem services provided by bats, and the close relationship between bats and humans, future research should focus on the impacts and significance of N. pallidimors to human and animal health, examining its pathogenicity and secondary metabolites. Taxonomic descriptions, color images of the habitat, <i>in situ</i> samples, microstructures and cultures are presented. SEM photographs of microstructures and phylogenetic trees showing the placement of new and known species are also provided.
DOI: 10.6084/m9.figshare.12853691.v1
title: Discovery of novel fungal species and pathogens on bat carcasses in a cave in Yunnan Province, China

description: Virulent infectious fungal diseases, in natural and managed landscapes, are increasing. Fungal diseases in humans, animals and plants have caused die-off and extinction events and have become a threat to food security. A caving expedition in Yunnan Province, China, revealed two bat carcasses covered in fungal mycelia. Eleven fungal isolates were obtained from these bat carcasses, and morphological observations and multigene phylogenetic analyses revealed they were <i>Fusarium incarnatum, Mucor hiemalis</i> and <i>Trichoderma harzianum</i> and four new species, <i>Mortierella rhinolophicola, M. multispora, M. yunnanensis</i> and <i>Neocosmospora pallidimors</i>. One of the more alarming findings is that a number of infections related to <i>Neocosmospora</i>, previously associated with human and animal mycotoxicoses, are reported to be increasing, and here we present a new species from this genus, isolated from dead bats. Due to the ecosystem services provided by bats, and the close relationship between bats and humans, future research should focus on the impacts and significance of N. pallidimors to human and animal health, examining its pathogenicity and secondary metabolites. Taxonomic descriptions, color images of the habitat, <i>in situ</i> samples, microstructures and cultures are presented. SEM photographs of microstructures and phylogenetic trees showing the placement of new and known species are also provided.
DOI: 10.6084/m9.figshare.12853691.v3
title: Discovery of novel fungal species and pathogens on bat carcasses in a cave in Yunnan Province, China

description: Virulent infectious fungal diseases, in natural and managed landscapes, are increasing. Fungal diseases in humans, animals and plants have caused die-off and extinction events and have become a threat to food security. A caving expedition in Yunnan Province, China, revealed two bat carcasses covered in fungal mycelia. Eleven fungal isolates were obtained from these bat carcasses, and morphological observations and multigene phylogenetic analyses revealed they were <i>Fusarium incarnatum, Mucor hiemalis</i> and <i>Trichoderma harzianum</i> and four new species, <i>Mortierella rhinolophicola, M. multispora, M. yunnanensis</i> and <i>Neocosmospora pallidimors</i>. One of the more alarming findings is that a number of infections related to <i>Neocosmospora</i>, previously associated with human and animal mycotoxicoses, are reported to be increasing, and here we present a new species from this genus, isolated from dead bats. Due to the ecosystem services provided by bats, and the close relationship between bats and humans, future research should focus on the impacts and significance of N. pallidimors to human and animal health, examining its pathogenicity and secondary metabolites. Taxonomic descriptions, color images of the habitat, <i>in situ</i> samples, microstructures and cultures are presented. SEM photographs of microstructures and phylogenetic trees showing the placement of new and known species are also provided.
DOI: 10.6084/m9.figshare.12853691.v2
title: Discovery of novel fungal species and pathogens on bat carcasses in a cave in Yunnan Province, China

description: Virulent infectious fungal diseases, in natural and managed landscapes, are increasing. Fungal diseases in humans, animals and plants have caused die-off and extinction events and have become a threat to food security. A caving expedition in Yunnan Province, China, revealed two bat carcasses covered in fungal mycelia. Eleven fungal isolates were obtained from these bat carcasses, and morphological observations and multigene phylogenetic analyses revealed they were <i>Fusarium incarnatum, Mucor hiemalis</i> and <i>Trichoderma harzianum</i> and four new species, <i>Mortierella rhinolophicola, M. multispora, M. yunnanensis</i> and <i>Neocosmospora pallidimors</i>. One of the more alarming findings is that a number of infections related to <i>Neocosmospora</i>, previously associated with human and animal mycotoxicoses, are reported to be increasing, and here we present a new species from this genus, isolated from dead bats. Due to the ecosystem services provided by bats, and the close relationship between bats and humans, future research should focus on the impacts and significance of N. pallidimors to human and animal health, examining its pathogenicity and secondary metabolites. Taxonomic descriptions, color images of the habitat, <i>in situ</i> samples, microstructures and cultures are presented. SEM photographs of microstructures and phylogenetic trees showing the placement of new and known species are also provided.
DOI: 10.6084/m9.figshare.12853700
title: <i>Brucella melitensis</i>, a latent “travel bacterium,” continual spread and expansion from Northern to Southern China and its relationship to worldwide lineages

description: Brucellosis caused by <i>Brucella melitensis</i> is considered to be one of the most important zoonotic diseases in China. In this study, Conventional bio-typing, MLVA (multiple locus variable-number tandem repeat analysis), and WGS (whole-genome sequencing)-SNP (single nucleotide polymorphism) were used to study the genetic similarity of <i>B. melitensis</i> in northern and southern China and analyze its relationship with worldwide lineages. Currently, the distribution of species/biovars of <i>B. melitensis</i> has obviously changed, and <i>B. melitensis</i> has become the dominant species in southern regions of China. Strains from the southern had a common geographic origin with strains from the northern. Many MLVA-16 events were shared in the genotypes of the southern and northern strains, suggest that genotypic movement occurred from north to south. Based on WGS-SNP analysis, strains from different provinces were closely related and may have descended from one common ancestor, suggests that the southern strains originated from northern China. These data indicate that <i>B. melitensis</i> is a latent “travel bacterium” that spread and expanded from North China to South China. Moreover, <i>B. melitensis</i> strains from China are also genetically related to strains from other Asian regions (Kazakhstan, Russia, Mongolia, and India). The movement of infected sheep and their products requires control.
DOI: 10.6084/m9.figshare.12853700.v1
title: <i>Brucella melitensis</i>, a latent “travel bacterium,” continual spread and expansion from Northern to Southern China and its relationship to worldwide lineages

description: Brucellosis caused by <i>Brucella melitensis</i> is considered to be one of the most important zoonotic diseases in China. In this study, Conventional bio-typing, MLVA (multiple locus variable-number tandem repeat analysis), and WGS (whole-genome sequencing)-SNP (single nucleotide polymorphism) were used to study the genetic similarity of <i>B. melitensis</i> in northern and southern China and analyze its relationship with worldwide lineages. Currently, the distribution of species/biovars of <i>B. melitensis</i> has obviously changed, and <i>B. melitensis</i> has become the dominant species in southern regions of China. Strains from the southern had a common geographic origin with strains from the northern. Many MLVA-16 events were shared in the genotypes of the southern and northern strains, suggest that genotypic movement occurred from north to south. Based on WGS-SNP analysis, strains from different provinces were closely related and may have descended from one common ancestor, suggests that the southern strains originated from northern China. These data indicate that <i>B. melitensis</i> is a latent “travel bacterium” that spread and expanded from North China to South China. Moreover, <i>B. melitensis</i> strains from China are also genetically related to strains from other Asian regions (Kazakhstan, Russia, Mongolia, and India). The movement of infected sheep and their products requires control.
DOI: 10.6084/m9.figshare.11805126
title: Additional file 1 of Comparative transcriptome analysis indicates conversion of stamens into pistil-like structures in male sterile wheat (Triticum aestivum L.) with Aegilops crassa cytoplasm

description: Additional file 1: Table S1. B706-vs-C706A GO enrichment in biological process.
DOI: 10.6084/m9.figshare.11805126.v1
title: Additional file 1 of Comparative transcriptome analysis indicates conversion of stamens into pistil-like structures in male sterile wheat (Triticum aestivum L.) with Aegilops crassa cytoplasm

description: Additional file 1: Table S1. B706-vs-C706A GO enrichment in biological process.
DOI: 10.6084/m9.figshare.11805135
title: Additional file 2 of Comparative transcriptome analysis indicates conversion of stamens into pistil-like structures in male sterile wheat (Triticum aestivum L.) with Aegilops crassa cytoplasm

description: Additional file 2: Table S2. B706-vs-C706A pathway enrichment.
DOI: 10.6084/m9.figshare.11805135.v1
title: Additional file 2 of Comparative transcriptome analysis indicates conversion of stamens into pistil-like structures in male sterile wheat (Triticum aestivum L.) with Aegilops crassa cytoplasm

description: Additional file 2: Table S2. B706-vs-C706A pathway enrichment.
DOI: 10.6084/m9.figshare.11805141
title: Additional file 3 of Comparative transcriptome analysis indicates conversion of stamens into pistil-like structures in male sterile wheat (Triticum aestivum L.) with Aegilops crassa cytoplasm

description: Additional file 3: Table S3. Phylogenetic tree based on MADS-box transcription factor genes in different plant species.
DOI: 10.6084/m9.figshare.11805141.v1
title: Additional file 3 of Comparative transcriptome analysis indicates conversion of stamens into pistil-like structures in male sterile wheat (Triticum aestivum L.) with Aegilops crassa cytoplasm

description: Additional file 3: Table S3. Phylogenetic tree based on MADS-box transcription factor genes in different plant species.
DOI: 10.6084/m9.figshare.11805144
title: Additional file 4 of Comparative transcriptome analysis indicates conversion of stamens into pistil-like structures in male sterile wheat (Triticum aestivum L.) with Aegilops crassa cytoplasm

description: Additional file 4: Table S4. Sequence-specific primers used for RT-qPCR.
DOI: 10.6084/m9.figshare.11805144.v1
title: Additional file 4 of Comparative transcriptome analysis indicates conversion of stamens into pistil-like structures in male sterile wheat (Triticum aestivum L.) with Aegilops crassa cytoplasm

description: Additional file 4: Table S4. Sequence-specific primers used for RT-qPCR.
DOI: 10.6084/m9.figshare.12853724
title: Kinetics of SARS-CoV-2 specific IgM and IgG responses in COVID-19 patients

description: The emerging COVID-19 caused by SARS-CoV-2 infection poses severe challenges to global public health. Serum antibody testing is becoming one of the critical methods for the diagnosis of COVID-19 patients. We investigated IgM and IgG responses against SARS-CoV-2 nucleocapsid (N) and spike (S) protein after symptom onset in the intensive care unit (ICU) and non-ICU patients. 130 blood samples from 38 COVID-19 patients were collected. The levels of IgM and IgG specific to N and S protein were detected by ELISA. A series of blood samples were collected along the disease course from the same patient, including 11 ICU patients and 27 non-ICU patients for longitudinal analysis. N and S specific IgM and IgG (N-IgM, N-IgG, S-IgM, S-IgG) in non-ICU patients increased after symptom onset. N-IgM and S-IgM in some non-ICU patients reached a peak in the second week, while N-IgG and S-IgG continued to increase in the third week. The combined detection of N and S specific IgM and IgG could identify up to 75% of SARS-CoV-2 infected patients in the first week. S-IgG was significantly higher in non-ICU patients than in ICU patients in the third week. In contrast, N-IgG was significantly higher in ICU patients than in non-ICU patients. The increase of S-IgG positively correlated with the decrease of C-reactive protein (CRP) in non-ICU patients. N and S specific IgM and IgG increased gradually after symptom onset and can be used for detection of SARS-CoV-2 infection. Analysis of the dynamics of S-IgG may help to predict prognosis.
DOI: 10.6084/m9.figshare.12853724.v1
title: Kinetics of SARS-CoV-2 specific IgM and IgG responses in COVID-19 patients

description: The emerging COVID-19 caused by SARS-CoV-2 infection poses severe challenges to global public health. Serum antibody testing is becoming one of the critical methods for the diagnosis of COVID-19 patients. We investigated IgM and IgG responses against SARS-CoV-2 nucleocapsid (N) and spike (S) protein after symptom onset in the intensive care unit (ICU) and non-ICU patients. 130 blood samples from 38 COVID-19 patients were collected. The levels of IgM and IgG specific to N and S protein were detected by ELISA. A series of blood samples were collected along the disease course from the same patient, including 11 ICU patients and 27 non-ICU patients for longitudinal analysis. N and S specific IgM and IgG (N-IgM, N-IgG, S-IgM, S-IgG) in non-ICU patients increased after symptom onset. N-IgM and S-IgM in some non-ICU patients reached a peak in the second week, while N-IgG and S-IgG continued to increase in the third week. The combined detection of N and S specific IgM and IgG could identify up to 75% of SARS-CoV-2 infected patients in the first week. S-IgG was significantly higher in non-ICU patients than in ICU patients in the third week. In contrast, N-IgG was significantly higher in ICU patients than in non-ICU patients. The increase of S-IgG positively correlated with the decrease of C-reactive protein (CRP) in non-ICU patients. N and S specific IgM and IgG increased gradually after symptom onset and can be used for detection of SARS-CoV-2 infection. Analysis of the dynamics of S-IgG may help to predict prognosis.
DOI: 10.6084/m9.figshare.12853724.v3
title: Kinetics of SARS-CoV-2 specific IgM and IgG responses in COVID-19 patients

description: The emerging COVID-19 caused by SARS-CoV-2 infection poses severe challenges to global public health. Serum antibody testing is becoming one of the critical methods for the diagnosis of COVID-19 patients. We investigated IgM and IgG responses against SARS-CoV-2 nucleocapsid (N) and spike (S) protein after symptom onset in the intensive care unit (ICU) and non-ICU patients. 130 blood samples from 38 COVID-19 patients were collected. The levels of IgM and IgG specific to N and S protein were detected by ELISA. A series of blood samples were collected along the disease course from the same patient, including 11 ICU patients and 27 non-ICU patients for longitudinal analysis. N and S specific IgM and IgG (N-IgM, N-IgG, S-IgM, S-IgG) in non-ICU patients increased after symptom onset. N-IgM and S-IgM in some non-ICU patients reached a peak in the second week, while N-IgG and S-IgG continued to increase in the third week. The combined detection of N and S specific IgM and IgG could identify up to 75% of SARS-CoV-2 infected patients in the first week. S-IgG was significantly higher in non-ICU patients than in ICU patients in the third week. In contrast, N-IgG was significantly higher in ICU patients than in non-ICU patients. The increase of S-IgG positively correlated with the decrease of C-reactive protein (CRP) in non-ICU patients. N and S specific IgM and IgG increased gradually after symptom onset and can be used for detection of SARS-CoV-2 infection. Analysis of the dynamics of S-IgG may help to predict prognosis.