cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.23645/epacomptox.6062785.v5
title: ToxCast Data Pipeline Overview

description: The tcpl package was developed to process high-throughput and high-content screening data generated by the ToxCast program. ToxCast is screening thousands of chemicals with hundreds of assays coming from numerous and diverse biochemical and cell-based technology platforms. The diverse data, received in heterogeneous formats from numerous vendors, are transformed to a standard computable format and loaded into the tcpl database by vendor-specific R scripts. Once data is loaded into the database, ToxCast utilizes the generalized processing functions provided in this package to process, normalize, model, qualify, flag, inspect, and visualize the data. While developed primarily for ToxCast, we have attempted to make the tcpl package generally applicable to chemical-screening community.
DOI: 10.6084/m9.figshare.9114794.v1
title: clinical impact charity fund cites by year

description: clinical impact charity fund cites by year
DOI: 10.6084/m9.figshare.9114842
title: WoS scottish hospital cites 2000

description: WoS scottish hospital cites 2000
DOI: 10.6084/m9.figshare.9114878
title: WoS scottish hospital cites 2008

description: WoS scottish hospital cites 2008
DOI: 10.6084/m9.figshare.9119045.v1
title: Untitled Item

description: Analisa data kualitatif pada penelitian persepsi pemenuhan kebutuhan seksual pada pasien post miokard infark. data diambil dari proses indeep interview dengan partisipan.
DOI: 10.6084/m9.figshare.9121901.v1
title: pik3ca data.csv

description: this hospital based cross-sectional study conducted among Sudanese women with ovarian cancer <br><br>
DOI: 10.6084/m9.figshare.9121901.v2
title: pik3ca data.csv

description: this hospital based cross-sectional study conducted among Sudanese women with ovarian cancer <br><br>
DOI: 10.6084/m9.figshare.9943295.v1
title: Suicides in South American Prisons: Incidence and associated Factors

description: A Dataset exploring suicide counts in South American Prisons. The set contains suicide and population counts divided by female and male gender between 2000 and 2017 in the federal prisons of Argentina, the Palmasola prison in Bolivia, all public prisons in Brazil, Chile, Colombia, Ecuador, Guyana, Paraguay, Perú, and Uruguay. The set also contains rates of occupancy, rates of incarceration, and suicide and population counts for the general population of the same countries.
DOI: 10.12751/g-node.08853e
title: Clusters of cooperative ion channels enable a membrane potential-based mechanism for short-term memory

description: This data repository holds the dynamic clamp recordings and analysis scripts to test whether cooperative ion channels could produce persistent activity in perirhinal cortex neurons.
DOI: 10.12751/g-node.f13e77
title: Interactive effects of dopamine transporter genotype and aging on resting-state functional networks

description: The resting-state fMRI data are fully preprocessed and arranged in 4D nifti files. Preprocessing was carried out using SPM 12 (slice-time correction, spatial unwarping, normalizing to MNI space, smoothing with an 8 mm Gaussian kernel) and FSL's ICA-AROMA (additional head-motion correction). Furthermore, the resting-state fMRI data were bandpass filtered (band: 0.009 - 0.08 Hz) and mean WM and CSF signals were regressed out.  Behavioral data contain information on age, sex and the individual scores on the Raven's matrices test, the Stroop test (variables: accuracy on incongruent color and reaction time of incongruent color), the spot-a-word test and the identical pictures test.
DOI: 10.13012/b2idb-0016089_v2
title: Data files for "Bee diversity in tallgrass prairies affected by management and its effects on above‐ and below‐ground resources"

description: Data used in paper published in the Journal of Applied Ecology titled " Bee diversity in tallgrass prairies affected by management and its effects on above- and below-ground resources" Bee Community file contains info on bees sampled in each site. The first column contain the Tallgrass Prairie Sites sampled all additional columns contain the bee species name in the first row and all individuals recorded. Plant Community file contains info on plants sampled in each site. The first column contain the Tallgrass Prairie Sites sampled all additional columns contain the plant species name in the first row and all individuals recorded. Soil PC1 file contains the soil PC1 values used in the analyses. The first column contain the Tallgrass Prairie Sites sampled, the second column contains the calculated soil PC1 values.
DOI: 10.13012/b2idb-0440388_v1
title: Feather Louse Orthology set

description: This is the data set associated with the manuscript titled "Extensive host-switching of avian feather lice following the Cretaceous-Paleogene mass extinction event." Included are the gene alignments used for phylogenetic analyses and the cophylogenetic input files.
DOI: 10.13012/b2idb-1530363_v1
title: Supplemental data sets for Raudabaugh et al., Where are they hiding? Testing the body snatchers hypothesis in pyrophilous fungi

description: The data set contains Supplemental data sets for the Manuscript entitled "Where are they hiding? Testing the body snatchers hypothesis in pyrophilous fungi." Environmental sampling: Amplification of nuclear DNA regions (ITS1 and ITS2) were completed using the Fluidigm Access Array and the resulting amplicons were sequenced on an Illumina MiSeq v2 platform runs using rapid 2 × 250 nt paired-end reads. Illumina sequencing run amplicons that were size selected into &lt;500nt and &gt;500nt sub-pools, then remixed together &lt;500nt: &gt;500nt by nM concentration in a 1x:3x proportion. All amplification and sequencing steps were performed at the Roy J. Carver Biotechnology Center at the University of Illinois Urbana-Champaign. ITS1 region primers consisted of ITS1F (5'-CTTGGTCATTTAGAGGAAGTAA-'3) and ITS2 (5'-GCTGCGTTCTTCATCGATGC-'3). ITS2 region primers consisted of fITS7 (5'-GTGARTCATCGAATCTTTG-'3) and ITS4 (5'-TCCTCCGCTTATTGATATGC-'3). Supplemental files 1 through 5 contain the raw data files. Supplemental 1 is the ITS1 Illumina MiSeq forward reads and Supplemental 2 is the corresponding index files. Supplemental 3 is the ITS2 Illumina MiSeq forward reads and Supplemental 4 is the corresponding index files. Supplemental 5 is the map file needed to process the forward reads and index files in QIIME. Supplemental 6 and 7 contain the resulting QIIME 1.9.1. OTU tables along with UNITE, NCBI, and CONSTAX taxonomic assignments in addition to the representative OTU sequence. Numeric samples within the OTU tables correspond to the following: 1 Brachythecium sp. 2 Usnea cornuta 3 Dicranum sp. 4 Leucodon julaceus 5 Lobaria quercizans 6 Rhizomnium sp. 7 Dicranum sp. 8 Thuidium delicatulum 9 Myelochroa aurulenta 10 Atrichum angustatum 11 Dicranum sp. 12 Hypnum sp. 13 Atrichum angustatum 14 Hypnum sp. 15 Thuidium delicatulum 16 Leucobryum sp. 17 Polytrichum commune 18 Atrichum angustatum 19 Atrichum angustatum 20 Atrichum crispulum 21 Bryaceae 22 Leucobryum sp. 23 Conocephalum conicum 24 Climacium americanum 25 Atrichum angustatum 26 Huperzia serrata 27 Polytrichum commune 28 Diphasiastrum sp. 29 Anomodon attenuatus 30 Bryoandersonia sp. 31 Polytrichum commune 32 Thuidium delicatulum 33 Brachythecium sp. 34 Leucobryum glaucum 35 Bryoandersonia sp. 36 Anomodon attenuatus 37 Pohlia sp. 38 Cinclidium sp. 39 Hylocomium splendens 40 Polytrichum commune 41 negative control 42 Soil 43 Soil 44 Soil 45 Soil 46 Soil 47 Soil If a sample number is not present within the OTU table; either no sequences were obtained or no sequences passed the quality filtering step in QIIME. Supplemental 8 contains the Summary of unique species per location.
DOI: 10.22021/bcldrdfz201909
title: The Linked Open British National Bibliography – Forthcoming Books – 2019-09 - RDF/XML
DOI: 10.22021/bsldrdfz201909
title: The Linked Open British National Bibliography – Serials. 1950/2019-09 – RDF/XML
DOI: 10.25678/0001b6
title: Trend-based calibration experiments with floodX data

description: This archive contains the results from calibration experiments with trend-like data. A simple EPA SWMM flood model was calibrated with different combinations of conventional water level data and trend-like water level data. Three different measurement locations in the model were possible: the pond (s3), the outlet shaft (s5), and the basement (s6). Trend-like data of different qualities were considered: error-free data (codename "trend"), data with correlated errors ("sofi") and data with uncorrelated errors ("gaussiantrend").
DOI: 10.6084/m9.figshare.11316827
title: news&comments about privacy in 2011-2019 on sina-microblog.zip

description: ①This dataset contains news and Weibo comments about online privacy from September 2011 to November 2019 on the Sina Weibo platform, crawled by the Octopus Collector. ②Only news with more than 10 comments will be included in our scope.<br>③These news are mainly about Internet companies collecting user privacy, social network privacy and other aspects, excluding news due to hacking, online scams, human flesh search and so on.<br>④These comments were searched on Weibo with news as the key word, and crawled the comments below the retrieved Weibo.<br>⑤The retrieval process is recorded in Chinese in index.xlsx, including classification, news title, start and end time, estimated number of comments, and search keywords.
DOI: 10.6084/m9.figshare.9113189
title: Human Thermography Data Points

description: A thermal camera (FLIR E8) was used to measure skin surface temperature at the sternal notch and at 44 predetermined locations on the limbs of 18 human participants. Body locations of high, middle and low Buruli ulcer incidence were identified from existing density maps of lesion distribution. Skin temperature of the three incidence location groups were compared, and differences in age and sex groups were also analysed. All temperatures are in degrees celsius. There are 3 indirect identifiers and no direct identifiers of human participants. This study was approved by the Austin Health Human Research Ethics Committee. Reference number: HREC/17/Austin/578. Written consent was obtained from each participant. <br>
DOI: 10.6084/m9.figshare.9114503
title: Questionnaire-PEFR-chronic respiratory symptoms

description: Questionnaire for collecting data on chronic respiratory symptoms and cooking smoke exposure.
DOI: 10.6084/m9.figshare.9114806
title: clinical impact matched ref charity fund

description: clinical impact matched references from a swedish charity fund
DOI: 10.6084/m9.figshare.9114842.v1
title: WoS scottish hospital cites 2000

description: WoS scottish hospital cites 2000
DOI: 10.6084/m9.figshare.9114851
title: WoS scottish hospital cites 2004

description: WoS scottish hospital cites 2004
DOI: 10.6084/m9.figshare.9114878.v3
title: WoS scottish hospital cites 2008

description: WoS scottish hospital cites 2008
DOI: 10.13012/b2idb-1747658_v1
title: Data from TRACTION: Fast non-parametric improvement of estimated gene trees

description: Datasets used in the study, "TRACTION: Fast non-parametric improvement of estimated gene trees," accepted at the Workshop on Algorithms in Bioinformatics (WABI) 2019.
DOI: 10.22021/bsldntz201905
title: The Linked Open British National Bibliography – Serials. 1950/2019-05 – N-Triples
DOI: 10.25387/g3.10074323
title: Supplemental Material for Arojju et al., 2020

description: Supplementary_Material: Tables S1 - S11 and Figure S1<br>File S1: Genome-wide marker data. <br>File S2: Genomic relationship matrix.<br>File S3: KGD genomic relationship matrix.<br>File S4: Phenotypic BLUPs from across the two locations and individual locations, Lincoln and Aorangi.<br>
DOI: 10.25387/g3.7884779
title: Supplemental Material for Singh et al., 2019

description: Supplement1 contains raw phenotypic data collected from 555 diversity panel lines, Supplement2 contains Goss’s wilt BLUEs for diversity panel inbred lines, Supplement3 contains subpopulation memberships (population structure) of 555 diversity panel lines computed using ADMIXTURE, supplement4 is contains raw phenotypic data for biparental populations, supplement5 contains Goss’s wilt BLUEs (1005 lines) used in Combined GWAS model, supplement6 contains membership assignments or population structure information used in Combined GWAS model, and supplement7 contains gene expression data used for WGCNA.<br>FileS1 contains raw phenotypic data collected from 555 diversity panel lines, FileS2 contains Goss’s wilt BLUEs for diversity panel inbred lines, FileS3 contains subpopulation memberships (population structure) of 555 diversity panel lines computed using ADMIXTURE, FileS4 is contains raw phenotypic data for biparental populations, FileS5 contains Goss’s wilt BLUEs (1005 lines) used in Combined GWAS model, FileS6 contains membership assignments or population structure information used in Combined GWAS model, and FileS7 contains gene expression data used for WGCNA. <br>
DOI: 10.25387/g3.9273542
title: Supplemental Material for Salter et al., 2019

description: Northern bobwhites (Colinus virginianus) are small quails in the New World Quail family (Odontophoridae) and are one of the most phenotypically diverse avian species. Despite extensive research on bobwhite ecology, genomic studies investigating the evolution of phenotypic diversity in this species are lacking. Here, we present a new, highly contiguous assembly for bobwhites using tissue samples from a vouchered, wild, female bird collected in Louisiana. Using Dovetail Data set contains BUSCO and QUAST results. <br><b>Abstract</b>Chicago and HiC libraries with the HiRise assembly pipeline, we produced an 866.8 Mbp assembly including 1,512 scaffolds with a contig N50 of 66.8 Mbp, a scaffold L50 of four, and a BUSCO completeness score of 90.8%. This new assembly greatly improves scaffold lengths and contiguity compared to an existing draft bobwhite genome and provides an important tool for future studies of evolutionary and functional genomics in bobwhites.
DOI: 10.6084/m9.figshare.11316827.v1
title: news&comments about privacy in 2011-2019 on sina-microblog.zip

description: ①This dataset contains news and Weibo comments about online privacy from September 2011 to November 2019 on the Sina Weibo platform, crawled by the Octopus Collector. ②Only news with more than 10 comments will be included in our scope.<br>③These news are mainly about Internet companies collecting user privacy, social network privacy and other aspects, excluding news due to hacking, online scams, human flesh search and so on.<br>④These comments were searched on Weibo with news as the key word, and crawled the comments below the retrieved Weibo.<br>⑤The retrieval process is recorded in Chinese in index.xlsx, including classification, news title, start and end time, estimated number of comments, and search keywords.
DOI: 10.6084/m9.figshare.11319740
title: Suppl. Fig 1.xlsx

description: ANOVA analysis comparing Fast SOL, Slow SOL and EDL fiber mechanics from manuscript Biesiadecki et al "Rats genetically selected for low and high aerobic capacity exhibit altered Soleus muscle myofilament functions"
DOI: 10.6084/m9.figshare.11319740.v2
title: Suppl. Fig 1.xlsx

description: ANOVA analysis comparing Fast SOL, Slow SOL and EDL fiber mechanics from manuscript Biesiadecki et al "Rats genetically selected for low and high aerobic capacity exhibit altered Soleus muscle myofilament functions"
DOI: 10.6084/m9.figshare.9119045.v2
title: PERSEPSI PEMENUHAN KEBUTUHAN SEKSUALITAS PADA PASIEN POST MIOKARD INFARK

description: Analisa data kualitatif pada penelitian persepsi pemenuhan kebutuhan seksual pada pasien post miokard infark. data diambil dari proses indeep interview dengan partisipan.
DOI: 10.6084/m9.figshare.9121901.v3
title: pik3ca data.csv

description: this hospital based cross-sectional study conducted among Sudanese women with ovarian cancer <br><br>
DOI: 10.6084/m9.figshare.9122558
title: Figure 2 (Flotillins promote T cell receptor sorting through a fast Rab5-Rab11 endocytic recycling axis)

description: Raw images for Figure 2 2photon photoactivation
DOI: 10.6084/m9.figshare.9122558.v1
title: Flotillins promote T cell receptor sorting through a fast Rab5-Rab11 endocytic recycling axis Figure 2 raw data

description: Raw images for Figure 2 2photon photoactivation
DOI: 10.12751/g-node.3730d0
title: Factors other than hTau overexpression that contribute to tauopathy-like phenotype in rTg4510 mice

description: The tauopathy-like phenotype observed in the rTg4510 mouse line, in which human tauP301L expression specifically within the forebrain can be temporally controlled, has largely been attributed to high overexpression of mutant human tau in the forebrain region. Unexpectedly, we found that in a different mouse line with a targeted-insertion of the same transgene driven by the same tetracycline-TransActivator (tTA) allele, but with even higher overexpression of tauP301L than rTg4510, atrophy and tau histopathology are delayed, and a different behavioral profile is observed. This suggests that it is not overexpression of mutant human tau alone that contributes to the phenotype in rTg4510 mice. Furthermore we show that the tauopathy-like phenotype seen in rTg4510 requires a ~70-copy tau-transgene insertion in a 244kb deletion in Fgf14, a ~7-copy tTA- transgene insertion in a 508kb deletion that disrupts another five genes, in addition to high transgene  overexpression. We propose that these additional effects need to be accounted for in any studies using rTg4510, and that Tg-INDEL mutations and their impacts on phenotype should be defined for all transgenic models used in biomedical research.
DOI: 10.22021/bcldntz201909
title: The Linked Open British National Bibliography – Forthcoming Books – 2019-09 - N-Triples
DOI: 10.22021/bsldrdfz201905
title: The Linked Open British National Bibliography – Serials. 1950/2019-05 – RDF/XML
DOI: 10.25387/g3.10074323.v1
title: Supplemental Material for Arojju et al., 2020

description: Supplementary_Material: Tables S1 - S11 and Figure S1<br>File S1: Genome-wide marker data. <br>File S2: Genomic relationship matrix.<br>File S3: KGD genomic relationship matrix.<br>File S4: Phenotypic BLUPs from across the two locations and individual locations, Lincoln and Aorangi.<br>
DOI: 10.25387/g3.9273542.v1
title: Supplemental Material for Salter et al., 2019

description: Northern bobwhites (Colinus virginianus) are small quails in the New World Quail family (Odontophoridae) and are one of the most phenotypically diverse avian species. Despite extensive research on bobwhite ecology, genomic studies investigating the evolution of phenotypic diversity in this species are lacking. Here, we present a new, highly contiguous assembly for bobwhites using tissue samples from a vouchered, wild, female bird collected in Louisiana. Using Dovetail Data set contains BUSCO and QUAST results. <br><b>Abstract</b>Chicago and HiC libraries with the HiRise assembly pipeline, we produced an 866.8 Mbp assembly including 1,512 scaffolds with a contig N50 of 66.8 Mbp, a scaffold L50 of four, and a BUSCO completeness score of 90.8%. This new assembly greatly improves scaffold lengths and contiguity compared to an existing draft bobwhite genome and provides an important tool for future studies of evolutionary and functional genomics in bobwhites.
DOI: 10.6084/m9.figshare.8188667.v1
title: Supplemental Data S1-S3 and S26-S37 (i.e., Student and Professor Survey Questions and Results as well as statistical analyses of the data).

description: Questions and Results resulting from the Game testing
DOI: 10.6084/m9.figshare.9995879
title: Compressive strength.xlsx

description: The average values of compressive strength of CCGB at different ages (days 3, 7, 14, and 28) and substitution rates (0, 10, 20, 30, and 40 wt%) were recorded.
DOI: 10.12751/g-node.b4820c
title: A dataset of 151 visual cortical orientation preference maps from four species.

description: The dataset comprises all data analyzed in Schottdorf et al. PLoS CB 2015: Ferret (N = 82), dark-reared ferret (N = 21), cat (N = 13), tree shrew (N = 26), galago (N = 9). The code to analyze the data is provided in the supplemental online material of the article. The data is organized into a folder structure. On the highest level, there are folders for species/experiment type. The subfolders, one per OPM, contain the two raw difference images and a region-of-interest, all as tif-files, and a textfile with the number of pixels per mm.
description: IsSupplementTo: Schottdorf M, Keil W, Coppola D, White LE, Wolf F (2015) Random Wiring, Ganglion Cell Mosaics, and the Functional Architecture of the Visual Cortex. PLoS Comput Biol 11(11):e1004602. https://doi.org/10.1371/journal.pcbi.1004602
DOI: 10.13012/b2idb-2211060_v1
title: Data from: Mitochondrial genomes of Columbicola feather lice are highly fragmented, indicating repeated evolution of minicircle-type genomes in parasitic lice

description: Data files associated with the assembly of mitochondrial minicircles from five species of parasitic lice. This includes data from four species in the genus Columbicola and from the human louse (Pediculus humanus). The files include FASTA sequences for all five species, reference sequences for read mapping approaches, resulting contigs produced by various assembly approaches, and alignments of human louse minicircles mapped to published sequences of the same species.
DOI: 10.13012/b2idb-7540359_v1
title: Spatial and Temporal Invasion Dynamics of Aedes albopictus (Diptera: Culicidae) in Illinois

description: Supporting secondary data used in a manuscript currently in submission regarding the invasion dynamics of the asian tiger mosquito, Aedes albopictus, in the state of Illinois
DOI: 10.22021/bbldrdfz201905
title: The Linked Open British National Bibliography – Books. 1950/2019-05 – RDF/XML
DOI: 10.22021/bbldrdfz201909
title: The Linked Open British National Bibliography – Books. 1950/2019-09 – RDF/XML
DOI: 10.22021/bbldrdfz201911
title: The Linked Open British National Bibliography – Books. 1950/2019-11– RDF/XML
DOI: 10.22021/bsldntz201908
title: The Linked Open British National Bibliography – Serials. 1950/2019-08 – N-Triples
DOI: 10.6084/m9.figshare.9943295
title: Suicides in South American Prisons: Incidence and associated Factors

description: A Dataset exploring suicide counts in South American Prisons. The set contains suicide and population counts divided by female and male gender between 2000 and 2017 in the federal prisons of Argentina, the Palmasola prison in Bolivia, all public prisons in Brazil, Chile, Colombia, Ecuador, Guyana, Paraguay, Perú, and Uruguay. The set also contains rates of occupancy, rates of incarceration, and suicide and population counts for the general population of the same countries.
DOI: 10.12751/g-node.2bf64c
title: Neglectful mothering and crying faces: fMRI data

description: fMRI data from 23 neglectful mothers (NM) and 20 control mothers (CM) imaged while viewing faces from infants and adults (crying and neutral)
DOI: 10.22021/10.22021/bsldrdfz201810
title: The Linked Open British National Bibliography – Serials. 1950/2018-10 – RDF/XML
DOI: 10.22021/bbldntz201905
title: The Linked Open British National Bibliography – Books. 1950/2019-05 – N-Triples
DOI: 10.22021/bbldntz201911
title: The Linked Open British National Bibliography – Books. 1950/2019-11 – N-Triples
DOI: 10.22021/bcldntz201810
title: The Linked Open British National Bibliography – Forthcoming Books. 2018-10 – N-Triples
DOI: 10.22021/bcldrdfz201911
title: The Linked Open British National Bibliography – Forthcoming Books. 2019-11 – RDF/XML
DOI: 10.22021/bsldntz201810
title: The Linked Open British National Bibliography – Serials. 1950/2018-10 – N-Triples
DOI: 10.22021/bsldntz201911
title: The Linked Open British National Bibliography – Serials. 1950/2019-11 – N-Triples