cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.mqkhka
title: Occurrence Download

description: A dataset containing 590 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year is greater than or equal to 1970",
 "TaxonKey is Bactrocera philippinensis Drew & Hancock, 1994",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 590 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0168056-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4vb33m
title: Occurrence Download

description: A dataset containing 4711 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Speculanas specularis",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 4711 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084882-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5swpt
title: Occurrence Download

description: A dataset containing 955 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aphis glycines, Aphis glycines, Aphis glycines Matsumura, Aphis glycines Matsumura, 1917, 177046072, Aphis glycines Matsumura, 1917, Aphis glycines Matsumura, Aphis glycines Matsumura, 1917, Aphis glycines Matsumura, 1917, 157667087, Aphis glycines Matsumura, 1917, Aphis glycines virus, Aphis glycines virus, Aphis glycines virus 3, Aphis glycines virus 1, Aphis glycines virus 1, Aphis glycines virus 2, Aphis glycines virus 3, Aphis glycines virus 2, Aphis (Aphis) glycines Matsumura, 1917, Wolbachia endosymbiont of Aphis glycines, Arsenophonus endosymbiont of Aphis glycines, Arsenophonus endosymbiont of Aphis glycines, Wolbachia endosymbiont of Aphis glycines, Brumoides lineatus (Weise, 1885), Monomorium minimum Buckley, Binodoxys communis (Gahan, 1926), Paragus quadrifasciatus Meigen, 1822)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 955 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180573-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zayvmz
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plectranthus lucidus (Benth.) van Jaarsv. & T.J.Edwards"
 ]
}

 The dataset includes 14 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084915-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5vfhmu
title: Occurrence Download

description: A dataset containing 119 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((107 40,143 40,143 59,107 59,107 40))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dictamnus dasycarpus Turcz.",
 "Year 1970-2022"
 ]
}

 The dataset includes 119 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0168057-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hdbh42
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plectranthus kivuensis (Lebrun & L.Touss.) R.H.Willemse"
 ]
}

 The dataset includes 24 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084871-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rj9u6s
title: Occurrence Download

description: A dataset containing 241 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhododendron primuliflorum Bureau & Franch.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 241 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0321227-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4thuu7
title: Occurrence Download

description: A dataset containing 6026 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Epinephelus marginatus (Lowe, 1834)"
 ]
}

 The dataset includes 6026 records from 98 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0205706-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kes79x
title: Occurrence Download

description: A dataset containing 572 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Plectranthus laxiflorus Benth."
 ]
}

 The dataset includes 572 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084899-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s4xw5y
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-104.42605 22.54981,-103.92667 24.18777,-103.32741 24.5673,-102.66823 24.60725,-103.62704 24.8869,-103.62704 25.42623,-103.80682 25.90564,-104.22629 26.40501,-104.72567 26.22524,-105.24503 26.38504,-105.82431 26.44496,-106.14391 26.26519,-106.34366 25.88566,-106.54341 25.58603,-106.84304 25.46618,-106.94291 25.10663,-106.66326 24.84695,-104.42605 22.54981))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Meleagris gallopavo gallopavo"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180574-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uht7cw
title: Occurrence Download

description: A dataset containing 28814 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Galeorhinus galeus (Linnaeus, 1758)"
 ]
}

 The dataset includes 28814 records from 154 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0205707-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.26wxuq
title: Occurrence Download

description: A dataset containing 3939 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Spheniscus demersus",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 3939 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084922-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5qvu3r
title: Occurrence Download

description: A dataset containing 242 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Populus cathayana Rehder",
 "TaxonKey is Populus cathayana var. pedicellata Z.Wang & S.L.Tung",
 "TaxonKey is Populus cathayana var. schneideri Rehder",
 "TaxonKey is Populus cathayana subsp. schneideri Rehder",
 "TaxonKey is Populus cathayana var. pendula T.B.Chao",
 "TaxonKey is Populus ×catherinae R.I.Schröd.",
 "TaxonKey is Populus cathayana var. latifolia (Z.Wang & C.Y.Yu) Z.Wang & S.L.Tung",
 "TaxonKey is Populus cathayana var. cathayana",
 "TaxonKey is Populus cathayana f. latifolia Z.Wang & C.Y.Yu"
 ]
}

 The dataset includes 242 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180586-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m4judd
title: Occurrence Download

description: A dataset containing 1787 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Mustelus mustelus (Linnaeus, 1758)"
 ]
}

 The dataset includes 1787 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0205712-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5284/1118649
title: Data from a Watching Brief at 16 St Clare Road, Colchester, Essex, March 2022

description: This archive comprises reports, images, CAD files and site records from archaeological monitoring at 16 St Clare Road, Colchester, Essex, undertaken by Colchester Archaeological Trust in March 2022.
DOI: 10.6084/m9.figshare.25683921
title: Domestication experiment data

description: Underlying data for Lee et al paper in Environmental Entomology - contact me (preisser@uri.edu) if you have any questions.
DOI: 10.6084/m9.figshare.25683921.v1
title: Domestication experiment data

description: Underlying data for Lee et al paper in Environmental Entomology - contact me (preisser@uri.edu) if you have any questions.
DOI: 10.15468/dl.gkt3gn
title: Occurrence Download

description: A dataset containing 924266 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2023-05-16",
 "EventDate is less than or equal to 2023-06-15",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 924266 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084864-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3pdpnq
title: Occurrence Download

description: A dataset containing 57078 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cercis L."
 ]
}

 The dataset includes 57078 records from 483 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0205728-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gg99qp
title: Occurrence Download

description: A dataset containing 1530 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Juniperus formosa Carrière",
 "TaxonKey is Juniperus formosana subsp. formosana",
 "TaxonKey is Juniperus formosana subsp. concolor Hayata",
 "TaxonKey is Juniperus formosana var. formosana",
 "TaxonKey is Juniperus formosana var. mairei (Lemée & Lév.) R.P.Adams & C.F.Hsieh",
 "TaxonKey is Juniperus formosana subsp. mairei (Lemée & H.Lév.) Silba",
 "TaxonKey is Juniperus formosana Hayata",
 "TaxonKey is Juniperus formosana var. sinica Nakai",
 "TaxonKey is Juniperus formosana var. concolor Hayata",
 "TaxonKey is Juniperus formosana f. tenella Hand.-Mazz."
 ]
}

 The dataset includes 1530 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180587-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cbfyy5
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "StateProvince is one of (casanare, arauca, vichada)",
 "TaxonKey is one of (Copaifera pubiflora Benth.)"
 ]
 }
 ]
}

 The dataset includes 72 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0094747-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ge7s4n
title: Occurrence Download

description: A dataset containing 273 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Patera clarkii (I.Lea, 1858)"
 ]
}

 The dataset includes 273 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0177640-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xwtwfk
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Abundance of non-diatom phytoplankton measured on water bottle samples at station PS58/108-1"
 ]
}

 The dataset includes 24 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180589-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bajpry
title: Occurrence Download

description: A dataset containing 2733060 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elasmobranchii"
 ]
}

 The dataset includes 2733060 records from 1164 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0399191-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10972600
title: STEAD subsample 4 CDiffSD

description: STEAD Subsample Dataset for CDiffSD Training

Overview

This dataset is a subsampled version of the STEAD dataset, specifically tailored for training our CDiffSD model (Cold Diffusion for Seismic Denoising). It consists of four HDF5 files, each saved in a format that requires Python's `h5py` method for opening.

Dataset Files

The dataset includes the following files:



train: Used for both training and validation phases (with validation train split). Contains earthquake ground truth traces.

noise_train: Used for both training and validation phases. Contains noise used to contaminate the traces.

test: Used for the testing phase, structured similarly to train.

noise_test: Used for the testing phase, contains noise data for testing.


Each file is structured to support the training and evaluation of seismic denoising models.

Data

The HDF5 files named noise contain two main datasets:



traces: This dataset includes N number of events, with each event being 6000 in size, representing the length of the traces. Each trace is organized into three channels in the following order: E (East-West), N (North-South), Z (Vertical).

metadata: This dataset contains the names of the traces for each event.


Similarly, the train and test files, which contain earthquake data, include the same traces and metadata datasets, but also feature two additional datasets:



p_arrival: Contains the arrival indices of P-waves, expressed in counts.

s_arrival: Contains the arrival indices of S-waves, also expressed in counts.


Usage

To load these files in a Python environment, use the following approach:

```python

import h5pyimport numpy as np

# Open the HDF5 file in read modewith h5py.File('train_noise.hdf5', 'r') as file:    # Print all the main keys in the file    print("Keys in the HDF5 file:", list(file.keys()))

    if 'traces' in file:        # Access the dataset        data = file['traces'][:10]  # Load the first 10 traces

    if 'metadata' in file:        # Access the dataset        trace_name = file['metadata'][:10]  # Load the first 10 metadata entries```

Ensure that the path to the file is correctly specified relative to your Python script.

Requirements

To use this dataset, ensure you have Python installed along with the Pandas library, which can be installed via pip if not already available:

```bashpip install numpypip install h5py```
DOI: 10.5281/zenodo.11094536
title: STEAD subsample 4 CDiffSD

description: STEAD Subsample Dataset for CDiffSD Training

Overview

This dataset is a subsampled version of the STEAD dataset, specifically tailored for training our CDiffSD model (Cold Diffusion for Seismic Denoising). It consists of four HDF5 files, each saved in a format that requires Python's `h5py` method for opening.

Dataset Files

The dataset includes the following files:



train: Used for both training and validation phases (with validation train split). Contains earthquake ground truth traces.

noise_train: Used for both training and validation phases. Contains noise used to contaminate the traces.

test: Used for the testing phase, structured similarly to train.

noise_test: Used for the testing phase, contains noise data for testing.


Each file is structured to support the training and evaluation of seismic denoising models.

Data

The HDF5 files named noise contain two main datasets:



traces: This dataset includes N number of events, with each event being 6000 in size, representing the length of the traces. Each trace is organized into three channels in the following order: E (East-West), N (North-South), Z (Vertical).

metadata: This dataset contains the names of the traces for each event.


Similarly, the train and test files, which contain earthquake data, include the same traces and metadata datasets, but also feature two additional datasets:



p_arrival: Contains the arrival indices of P-waves, expressed in counts.

s_arrival: Contains the arrival indices of S-waves, also expressed in counts.


Usage

To load these files in a Python environment, use the following approach:

```python

import h5pyimport numpy as np

# Open the HDF5 file in read modewith h5py.File('train_noise.hdf5', 'r') as file:    # Print all the main keys in the file    print("Keys in the HDF5 file:", list(file.keys()))

    if 'traces' in file:        # Access the dataset        data = file['traces'][:10]  # Load the first 10 traces

    if 'metadata' in file:        # Access the dataset        trace_name = file['metadata'][:10]  # Load the first 10 metadata entries```

Ensure that the path to the file is correctly specified relative to your Python script.

Requirements

To use this dataset, ensure you have Python installed along with the Pandas library, which can be installed via pip if not already available:

```bashpip install numpypip install h5py```
DOI: 10.15468/dl.pbmguy
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Demospongiae",
 "HasCoordinate is true",
 "Country is one of (Belgium)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 32 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0220199-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q6vpsm
title: Occurrence Download

description: A dataset containing 12913858 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Denmark",
 "DatasetKey is one of (The Danish Environmental Portal, species and habitats-database \"Danmarks Miljøportals Naturdatabase\", iNaturalist Research-grade Observations, Species recordings from the Danish National portal Arter.dk, NHMD Phycology Herbarium, Pl@ntNet automatically identified occurrences, Biological Society of Northwest Jutland, field observations, Denmark, Lund University Biological Museum - Botanical collection (LD), Threatened species occurrences, Denmark 1991-2015, Observation.org, Nature data from around the World)",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 12913858 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131399-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2p4ygg
title: Occurrence Download

description: A dataset containing 298 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Klasea baetica (Boiss. ex DC.) Holub, 1977"
 ]
}

 The dataset includes 298 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131391-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6k9zby
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is MOZ",
 "OccurrenceStatus is Present",
 "TaxonKey is Digitaria sanguinalis (L.) Scop.",
 "Year 1961-1990"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0422891-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vg98fa
title: Occurrence Download

description: A dataset containing 14291 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dryinidae",
 "Continent is one of (North America, South America)"
 ]
}

 The dataset includes 14291 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021711-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r4n3b3
title: Occurrence Download

description: A dataset containing 62243 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Malacostraca",
 "HasCoordinate is true",
 "Country is one of (Belgium)",
 "HasGeospatialIssue is false",
 "Year is greater than 2009"
 ]
}

 The dataset includes 62243 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0220179-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.