cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/8d7pjd7f86.1
title: Data for: Operational processing of big satellite data for monitoring glacier dynamics. Case study Muldrow Glacier 

description: The four-dimensional flow displacement and flow velocity time series for Muldrow Glaciers in Alaska during October 2014 - November 2021 from Sentinel-1 SAR data.
DOI: 10.17632/z5vxsvcrv7.4
title: Self-reported resistance training is associated with better bone microarchitecture in vegans

description: supplementary files
DOI: 10.17903/fk2/gfjov0
title: Region, father's education and offspring's education

description: Investigating the association between offspring's and father's education by region
DOI: 10.6084/m9.figshare.19923215
title: Testicular torsion: a modified surgical technique for immediate intravaginal testicular prosthesis implant

description: ABSTRACT Purpose: The aim of this paper is to propose a modified surgical technique for immediate intravaginal prosthesis implantation in patients undergoing orchiectomy due to testicular torsion, and to evaluate the wound healing process and patient’s satisfaction. Material and methods: We prospectively analyzed 137 patients with testicular torsion admitted to our facility between April 2018 and May 2020. Twenty-five patients who underwent orchiectomy were included in this study. Fifteen had a testicular prosthesis implanted at the same time as orchiectomy using a modified intravaginal technique (summary figure) and 10 received implants 6 to 12 months after orchiectomy. Wound healing was evaluated at a minimum of four checkpoints (on days 15, 45, 90 and 180 after surgery). At the end of the study, a questionnaire was administered to measure patients’ satisfaction rate. Student’s t test was used for comparison of quantitative data between negative vs. positive cultures (p &lt;0.05). The chi-square test was used to verify associations between categorical variables and immediate vs. late prosthesis implantation (p &lt;0.05). Results: Patient’s ages ranged from 13 to 23 years (mean 16.44 years). Overall time lapse from symptoms to orchiectomy ranged from 10 hours to 25 days (mean 7.92 days). Only one extrusion occurred and it happened in the late implant group. All wounds were healed in 72%, 88%, 95.8% and 100% of the cases on the 15th, 45th, 90th and 180th days after implant, respectively. At the end of the study, all patients stated they would recommend it to a friend or relative. The only patient that had prothesis extrusion asked to have it implanted again. Conclusion: There was no prosthesis extrusion using the modified intravaginal surgical technique for immediate testicular prosthesis implantation, which proved to be an easily performed and safe procedure that can avoid further reconstructive surgery in patients whose testicle was removed due to testicular torsion.
DOI: 10.6084/m9.figshare.19923215.v1
title: Testicular torsion: a modified surgical technique for immediate intravaginal testicular prosthesis implant

description: ABSTRACT Purpose: The aim of this paper is to propose a modified surgical technique for immediate intravaginal prosthesis implantation in patients undergoing orchiectomy due to testicular torsion, and to evaluate the wound healing process and patient’s satisfaction. Material and methods: We prospectively analyzed 137 patients with testicular torsion admitted to our facility between April 2018 and May 2020. Twenty-five patients who underwent orchiectomy were included in this study. Fifteen had a testicular prosthesis implanted at the same time as orchiectomy using a modified intravaginal technique (summary figure) and 10 received implants 6 to 12 months after orchiectomy. Wound healing was evaluated at a minimum of four checkpoints (on days 15, 45, 90 and 180 after surgery). At the end of the study, a questionnaire was administered to measure patients’ satisfaction rate. Student’s t test was used for comparison of quantitative data between negative vs. positive cultures (p &lt;0.05). The chi-square test was used to verify associations between categorical variables and immediate vs. late prosthesis implantation (p &lt;0.05). Results: Patient’s ages ranged from 13 to 23 years (mean 16.44 years). Overall time lapse from symptoms to orchiectomy ranged from 10 hours to 25 days (mean 7.92 days). Only one extrusion occurred and it happened in the late implant group. All wounds were healed in 72%, 88%, 95.8% and 100% of the cases on the 15th, 45th, 90th and 180th days after implant, respectively. At the end of the study, all patients stated they would recommend it to a friend or relative. The only patient that had prothesis extrusion asked to have it implanted again. Conclusion: There was no prosthesis extrusion using the modified intravaginal surgical technique for immediate testicular prosthesis implantation, which proved to be an easily performed and safe procedure that can avoid further reconstructive surgery in patients whose testicle was removed due to testicular torsion.
DOI: 10.17632/m77h37dfjf.1
title: Arduino based intra-cerebral microinjector device for neuroscience research. 

description: Stereotaxic surgery is a less invasive form of surgery that uses a three-dimensional coordinate system to place instruments at a specific location on the brain. Through this type of surgery, you can place: among others, needles within the structures of the brain, and therefore it can be done injections to deliver substances that otherwise could not cross the hematoencephalic barrier. The two most important parameters of the microinjection to control are, volume, and speed. The volume should not be so large that it displaces the brain tissue and tears it. The injection speed must also be slow so that the liquid that comes out of the syringe can diffuse into the tissue without displacing it and damaging it. Thus, the objectives of the present work are: 1) Develop not a 3D printed prototype but an end-user device. 2) It must be for animal research. 3) That It has the same precision in volume and speed as commercial devices. 4) That can be adjusted to 0.5 microliters to 1 ml microsyringes. 5) It can be placed directly on the stereotaxic surgery apparatus or used outside of it. 6) That the price is substantially lower than the commercial ones.
DOI: 10.17632/mr6kjmt22n.1
title: LINF_280017100

description: electron-transfer-flavoprotein - alpha polypeptide
Leishmania infantum (strain JPCM5)
DOI: 10.17632/rk6xvmvp3s.1
title: LINF_280017600

description: hypothetical protein - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/vc7dwg4wj8.1
title: LINF_280016900

description: hypothetical protein - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/bn4mtg5hxk.1
title: Feeding behavior parameters and temporal patterns in mid-lactation Holstein cows across a range of residual feed intake values - Supplemental Files

description: Supplemental data
DOI: 10.17632/jw25y27vrm.3
title: Mild respiratory COVID can cause multi-lineage neural cell and myelin dysregulation. Fernandez-Castaneda et al

description: Source data and supplemental tables.
DOI: 10.17632/vfz82847nr.2
title: Research data supporting "Toward automatic analysis of random monolayers: The effect of pair correlation". B-spline representations of integral Ic(q).

description: The files contain knots and coefficients of third order (quadratic) B-spline representations approximating the integral Ic(q) appearing in the equation for power spectral density of particle or cavity monolayer.
The integral depends on the total correlation function of objects forming the monolayer. We used B-spline representations of the correlation functions computed for the classical RSA systems at five values of surface coverage: 0.1, 0.2, 0.3, 0.4, and 0.5. For each coverage, we generated 20 replicas of the correlation function, as described at  http://dx.doi.org/10.17632/s4k84ccxww.2. Next, for each replica, we numerically computed the integral using the procedure DBFQAD of SLATEC library. This way we got 1E5 values of the integral at equidistant wavenumbers in the interval from 1E-3 to 1E2. After ensemble averaging we got 1E5 arithmetic mean values of the integral and standard deviations of the means, for each coverage. We identified and compared the maximum values of the standard deviation for each of the five coverages. The maximum standard deviations decreased with the increase in coverage from 1E-3 at coverage 0.1 to 8E-5 at coverage 0.5. Finally, we fit B-spline representations to the averaged integrals. For that, we used the B-spline fitting procedure splrep of the package SciPy.interpolate included in the Python-based open-source library SciPy. Considering the very small values of maximum standard deviations of the means, we used third order (quadratic) B-splines with the default knot vector generated by the procedure splrep, i.e., with the knot separation distance equal about 1E-3.
To calculate the integral with the B-splines you can use the procedures splev or BSpline of the module SciPy.interpolate of SciPy library v. 1.1.0. Knot vectors in the attached files begin and end with two improper knots, in accordance with the requirements of the procedures. For details, see the paper: P. Weroński & K. Pałka, "Toward automatic analysis of random monolayers: The effect of pair correlation", Measurement 179 (2021) 109536.
DOI: 10.17632/zss2tmxykn.1
title: Weather file

description: This is the dataset for the Shenzhen city weather file.
DOI: 10.6084/m9.figshare.19923218.v1
title: Morphological evaluation of lettuce genotypes grown under hydroponic system

description: ABSTRACT Crispleaf lettuce, which is a light green leaf lettuce, is the most popular leafy vegetable in Brazil. However, it is relevant to evaluate agronomic traits of lettuce with more intense green color leaves considering the increase in consumer demand. Thus, the aim of this study was to evaluate lettuce genotypes about the different chlorophyll contents and correlate with green mass production in a hydroponic system. Ten lettuce inbred lines and two cultivars (Vanda and Luiza) were evaluated for agronomic traits and chlorophyll contents in leaves. A randomized block design with four replicates was used. The chlorophyll content was variable among the genotypes, ranging from 43.3 (Luiza) to 20.8 (Vanda). The genotypes with the highest chlorophyll content were those who showed the lowest mass production, but no correlations were found between these variables, though.
DOI: 10.6084/m9.figshare.19923218
title: Morphological evaluation of lettuce genotypes grown under hydroponic system

description: ABSTRACT Crispleaf lettuce, which is a light green leaf lettuce, is the most popular leafy vegetable in Brazil. However, it is relevant to evaluate agronomic traits of lettuce with more intense green color leaves considering the increase in consumer demand. Thus, the aim of this study was to evaluate lettuce genotypes about the different chlorophyll contents and correlate with green mass production in a hydroponic system. Ten lettuce inbred lines and two cultivars (Vanda and Luiza) were evaluated for agronomic traits and chlorophyll contents in leaves. A randomized block design with four replicates was used. The chlorophyll content was variable among the genotypes, ranging from 43.3 (Luiza) to 20.8 (Vanda). The genotypes with the highest chlorophyll content were those who showed the lowest mass production, but no correlations were found between these variables, though.
DOI: 10.6084/m9.figshare.19923221
title: Benchmarking of mobile apps on heart failure

description: ABSTRACT Objective: to analyze the mobile apps on heart failure available in the main operating systems and their usability. Methods: benchmarking of mobile applications, systematic research, comprising 38 mobile applications for analysis of general information, functionalities and usability. Usability was assessed using System Usability Scale and Smartphone Usability Questionnaire, followed by the calculation of the agreement index and the exact binomial distribution test, with a significance level of p&gt; 0.05 and a proportion of 0.90. Results: mobile applications had English as the predominant language (73.7%), were directed to patients (71.1%) and the predominant theme was disease knowledge (34.2%). Functionalities ranged from general features to the need for an internet connection. In assessing usability, heart failure was shown to be 92.1% -94.7% and p &lt;0.05. Final considerations: the mobile apps on heart failure have varied content and adequate usability. However, there is a need to develop more comprehensive mobile applications.
DOI: 10.48544/74cd4cf9-90e6-43f9-989c-97e310a5b30b
title: Feedback MDO voorbereidingsformulier
DOI: 10.6084/m9.figshare.19923224
title: Sensitivity of lettuce cultivar Lucy Brown to pre-planting herbicide application

description: ABSTRACT Due to the low availability of herbicide active ingredients, the chemical weed management in lettuce crop is a challenge. The aim of this study was to evaluate the sensitivity of lettuce to the pre-planting application of the herbicides flumioxazin and trifluralin alone or in tank-mixture in lettuce, Lucy Brown cultivar. Two experiments were conducted. In experiment A, the soil was tilled before the herbicide application and it was tilled again before seedling transplanting. In experiment B, the soil was tilled just once before the herbicide application. The experimental design was in randomized blocks in a factorial scheme (3x3) +1 (2 factors with 3 levels and an additional control) with 4 replicates. We applied flumioxazin (120 g ha-1), trifluralin (450 g ha-1) and flumioxazin + trifluralin (120 + 450 g ha-1) in three different seasons before transplanting (0, 7 and 14 days). Lettuce productivity after trifluralin application (48.4 t ha-1) was higher than after flumioxazin application (16.8 t ha-1) in experiment A. In experiment B, flumioxazin decreased the number of lettuce leaves (25.6) at 14 DAT; no differences in lettuce productivity were verified, though. The herbicide trifluralin caused lower levels of phytotoxicity and was the most selective between the treatments when applied in the three seasons in both experiments.
DOI: 10.6084/m9.figshare.19923224.v1
title: Sensitivity of lettuce cultivar Lucy Brown to pre-planting herbicide application

description: ABSTRACT Due to the low availability of herbicide active ingredients, the chemical weed management in lettuce crop is a challenge. The aim of this study was to evaluate the sensitivity of lettuce to the pre-planting application of the herbicides flumioxazin and trifluralin alone or in tank-mixture in lettuce, Lucy Brown cultivar. Two experiments were conducted. In experiment A, the soil was tilled before the herbicide application and it was tilled again before seedling transplanting. In experiment B, the soil was tilled just once before the herbicide application. The experimental design was in randomized blocks in a factorial scheme (3x3) +1 (2 factors with 3 levels and an additional control) with 4 replicates. We applied flumioxazin (120 g ha-1), trifluralin (450 g ha-1) and flumioxazin + trifluralin (120 + 450 g ha-1) in three different seasons before transplanting (0, 7 and 14 days). Lettuce productivity after trifluralin application (48.4 t ha-1) was higher than after flumioxazin application (16.8 t ha-1) in experiment A. In experiment B, flumioxazin decreased the number of lettuce leaves (25.6) at 14 DAT; no differences in lettuce productivity were verified, though. The herbicide trifluralin caused lower levels of phytotoxicity and was the most selective between the treatments when applied in the three seasons in both experiments.
DOI: 10.6084/m9.figshare.19923227
title: Occurrence of Pseudomonas fluorescens and P. putida associated to tomato pith necrosis in Brazil

description: ABSTRACT In 2016, several reports emerged of fresh-market staked tomato plants with severe symptoms of pith necrosis and premature death in commercial cultivation areas in the states of Paraná and Minas Gerais, Brazil, which are similar to those caused by Pseudomonas corrugata. Four bacterial strains were isolated from infected tissue samples and characterized as Gram-negative, aerobic, and fluorescent on King’s B Medium. LOPAT tests were performed and the isolate UFU H120 was classified into group Vb (+ + − + −) and the isolates UFU H3, UFU H6, and UFU H21 into group Va (− + − + −). The pathogenicity of the isolates was confirmed by artificial inoculation on tomato plants of Santa Cruz type, cv. Kada Gigante, and Koch’s postulates were accomplished successfully. The isolates sequences of their 16S rRNA gene region were compared with those deposited in GenBank, the isolate UFU H120 aligning with Pseudomonas fluorescens (99,45% similarity) and the isolates UFU H3, UFU H6, and UFU H21 with Pseudomonas putida (99.2, 99.53 and 99.64% similarity, respectively). Notably, P. fluorescens and P. putida are most known as saprophytic bacteria normally present in the soil, although both of these species have already been reported to infect tomato plants in Italy. However, so far, there have not been any reports of such bacteria being phytopathogenic on tomato or any crop in Brazil. Thus, to our knowledge, this is the first report of pith necrosis of such occurrence in Brazil.
DOI: 10.6084/m9.figshare.19923227.v1
title: Occurrence of Pseudomonas fluorescens and P. putida associated to tomato pith necrosis in Brazil

description: ABSTRACT In 2016, several reports emerged of fresh-market staked tomato plants with severe symptoms of pith necrosis and premature death in commercial cultivation areas in the states of Paraná and Minas Gerais, Brazil, which are similar to those caused by Pseudomonas corrugata. Four bacterial strains were isolated from infected tissue samples and characterized as Gram-negative, aerobic, and fluorescent on King’s B Medium. LOPAT tests were performed and the isolate UFU H120 was classified into group Vb (+ + − + −) and the isolates UFU H3, UFU H6, and UFU H21 into group Va (− + − + −). The pathogenicity of the isolates was confirmed by artificial inoculation on tomato plants of Santa Cruz type, cv. Kada Gigante, and Koch’s postulates were accomplished successfully. The isolates sequences of their 16S rRNA gene region were compared with those deposited in GenBank, the isolate UFU H120 aligning with Pseudomonas fluorescens (99,45% similarity) and the isolates UFU H3, UFU H6, and UFU H21 with Pseudomonas putida (99.2, 99.53 and 99.64% similarity, respectively). Notably, P. fluorescens and P. putida are most known as saprophytic bacteria normally present in the soil, although both of these species have already been reported to infect tomato plants in Italy. However, so far, there have not been any reports of such bacteria being phytopathogenic on tomato or any crop in Brazil. Thus, to our knowledge, this is the first report of pith necrosis of such occurrence in Brazil.
DOI: 10.6084/m9.figshare.19923243
title: Additional file 1 of ClusTRace, a bioinformatic pipeline for analyzing clusters in virus phylogenies

description: Additional file 1: Table 1. Alfa and Beta sequences from Finland. GISAID accession ids for Alfa and Beta variants of concern genomic sequences from Finland.
DOI: 10.6084/m9.figshare.19923243.v1
title: Additional file 1 of ClusTRace, a bioinformatic pipeline for analyzing clusters in virus phylogenies

description: Additional file 1: Table 1. Alfa and Beta sequences from Finland. GISAID accession ids for Alfa and Beta variants of concern genomic sequences from Finland.
DOI: 10.6084/m9.figshare.19923246
title: Additional file 2 of ClusTRace, a bioinformatic pipeline for analyzing clusters in virus phylogenies

description: Additional file 2: ClusTRace results for Alfa and Beta sequences. Includes all files output by ClusTRace.
DOI: 10.6084/m9.figshare.19923249
title: Additional file 3 of ClusTRace, a bioinformatic pipeline for analyzing clusters in virus phylogenies

description: Additional file 3: Table 2. Delta sequences from Finland. GISAID accession ids for Delta variant of concern genomic sequences from Finland.
DOI: 10.6084/m9.figshare.19923246.v1
title: Additional file 2 of ClusTRace, a bioinformatic pipeline for analyzing clusters in virus phylogenies

description: Additional file 2: ClusTRace results for Alfa and Beta sequences. Includes all files output by ClusTRace.
DOI: 10.6084/m9.figshare.19923249.v1
title: Additional file 3 of ClusTRace, a bioinformatic pipeline for analyzing clusters in virus phylogenies

description: Additional file 3: Table 2. Delta sequences from Finland. GISAID accession ids for Delta variant of concern genomic sequences from Finland.
DOI: 10.5281/zenodo.6343459
title: NIOO-QingZ/Geertruidenberg_Mesocosms: Towards climate-robust water quality management: testing the efficacy of different eutrophication control measures during a heat

description: Data and Codes used in the following open-access publication: https://www.sciencedirect.com/science/article/pii/S0048969722015145
DOI: 10.6084/m9.figshare.19923254
title: Salivary nitrite and systemic biomarkers in obese individuals with periodontitis submitted to FMD

description: Abstract The objective of this 9-month clinical study is to assess the impact of one-stage full-mouth disinfection (FMD) on salivary nitrite levels and systemic biomarkers and its correlation with total subgingival bacterial load in obese and non-obese patients with periodontitis. In total, 94 patients (55 obese and 39 non-obese) were initially evaluated, seven were lost during follow-up, resulting in 87 individuals at the end of the study. Outcomes were assessed at baseline, 3, 6, and 9 months post periodontal treatment by FMD. Salivary nitrite levels were determined using Griess reagent. Blood samples were collected to determine C-Reactive Protein (CRP), alkaline phosphatase and fasting blood glucose. Real-time PCR was used to determine the total subgingival bacterial load. FMD protocol resulted in increased salivary nitrite levels at 6- and 9-months post-treatment in the non-obese group (p&lt;0.05). In obese individuals, FMD treatment led to an increase in salivary nitrite levels at 6 months (p&lt;0.05); however, at 9 months, the nitrite levels returned to baseline levels. For both groups, the highest nitrite values were observed at 6 months. In addition, in both groups, FMD was associated with a decrease in biomarkers related to systemic inflammation and cardiovascular diseases, such as CRP (p&lt;0.05) and alkaline phosphatase (p&lt;0.05), and had no impact on the fasting blood glucose. This study demonstrates that obese patients with periodontitis present similar salivary nitrite levels when compared with non-obese individuals. FMD protocol resulted in increases in salivary nitrite levels and was associated with a positive impact on systemic biomarkers, regardless of obesity status.