cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/22n-ly1-b54
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3n4-wyb-2mw
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13516508.v2
title: Table S1.xlsx

description: Demographic characteristics of patients in orlistat and ezetimibe intervention group
DOI: 10.6084/m9.figshare.14384855.v1
title: Records of Three Species of Bats Confirmed Around Lake Arimine in 2020 (Forecast)

description: 2020年6月1日～11月12日の有峰湖周辺においてキクガシラコウモリ10個体（うち斃死体1個体）、ウサギコウモリ2個体（うち斃死体1個体）、コテングコウモリ3個体（うち斃死体2個体）の3種類計15頭を確認した。これらの個体は林道沿いにある公衆トイレやビジターセンターで偶発的に見つけたものである。すべて1頭ずつ確認され、同所で同時に複数個体が見られた例は無かった。そのうち3種4個体は、秋に死体を拾得し、いずれも精巣が発達した発情期のオスであった。拾得個体はすべて標本として収蔵した。今後は、捕獲調査による個体識別を含めた継続的かつ詳細な調査が必要である。
DOI: 10.6084/m9.figshare.25465216.v1
title: S1 Data set

description: Supporting Information file
DOI: 10.6084/m9.figshare.825482.v1
title: The substitutions G245C and G245D in the Zn<sup>2+</sup>-binding pocket of the p53 protein result in differences of conformational flexibility of the DNA-binding domain

description: Transcription activation of the proapoptotic target genes is a means by which the p53 protein implements its function of tumor suppression. Zn<sup>2+</sup> is a known regulator of p53 binding to the target genes. We have previously obtained an evidence that amino acid substitutions in the p53 Zn<sup>2+</sup>-binding pocket can presumably exert an influence on Zn<sup>2+</sup> position in the Zn<sup>2+</sup>-p53 complex and thereby affect p53 binding to DNA. With these background considerations, our aim was to estimate the effect of the putative changes in the Zn<sup>2+</sup> position in its binding pocket due to the G245C and G245D substitutions on the conformation of the p53 DNA-binding motif. Statistical analysis of the molecular dynamics (MD) trajectories of the mutant p53-Zn<sup>2+</sup> complexes was used to detect significant deviations in conformation of the mutant p53 forms. MD simulations demonstrated that (1) the two substitutions in the Zn<sup>2+</sup>-binding pocket caused changes in the conformation of the p53 DNA-binding motif, as compared with the wild-type (WT) p53; (2) binding of Zn<sup>2+</sup> to the p53 mutant forms reduced the effect of the substitutions on conformational change; and (3) Zn<sup>2+</sup> binding in the normal position compensated the effect of the mutations on the conformation in comparison to the altered Zn<sup>2+</sup> position.
DOI: 10.3535/2vz-v6d-p50
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/res-zlm-4pg
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23998086.v2
title: proglang-detection2

description: Code snippet language classification.
DOI: 10.3535/496-57a-zk0
title: Tabulata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/a34-3rt-t5j
title: Tabulata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3515081.v1
title: Appendix E. Model selection statistics for robust design analysis of male European pond turtle capture data from Esquineau, Tour du Valat, France, 1997–2006.

description: Model selection statistics for robust design analysis of male European pond turtle capture data from Esquineau, Tour du Valat, France, 1997–2006.
DOI: 10.25375/uct.24942711.v1
title: <b>Transcriptomic signatures of progression to TB disease among close contacts in Brazil: Public dataset</b>

description: <b>Overview</b>This is a public, subject-level dataset containing key variables necessary to reconstruct the study findings. A data dictionary is also provided in the README file. This dataset includes all available Fluidigm RT-qPCR data and transcriptomic signature scores from close contacts enrolled in the study with data at the baseline and/or month 6 timepoints.<b>Abstract</b>Background: Approximately 5% of people infected with Mycobacterium tuberculosis progress to tuberculosis (TB) disease without preventive therapy. There is a need for a prognostic test to identify those at highest risk of incident TB, so that therapy can be targeted. We evaluated host blood transcriptomic signatures for progression to TB disease.Methods: Close contacts (≥4 hours exposure per week) of adult patients with culture-confirmed pulmonary TB were enrolled in Brazil. Investigation for incident, microbiologically-confirmed or clinically-diagnosed pulmonary or extra-pulmonary TB disease through 24 months of follow-up was symptom-triggered. Twenty previously validated blood TB transcriptomic signatures were measured at baseline by real-time quantitative PCR. Prognostic performance for incident TB was tested using receiver operating characteristic curve (ROC) analysis at 6, 9, 12, and 24 months of follow-up. Results: Between June 2015 and June 2019, 1,854 close contacts were enrolled; Twenty-five progressed to incident TB, of whom 13 had microbiologically-confirmed disease. Baseline transcriptomic signature scores were measured in 1,789 close contacts. Prognostic performance for all signatures was best within 6 months of diagnosis. Seven signatures (Gliddon4, Suliman4, Roe3, Roe1, Penn-Nicholson6, Francisco2, and Rajan5) met the minimum World Health Organization target product profile (TPP) for a prognostic test through 6 months; three (Gliddon4, Rajan5, and Duffy9) through 9 months. None met the TPP threshold through 12 or more months of follow-up.Conclusions: Blood transcriptomic signatures may be useful for predicting TB risk within 9 months of measurement among TB-exposed contacts, to target preventive therapy administration.
DOI: 10.3535/6g2-gqb-6n4
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/amc-1hn-r5f
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gla-ved-bm6
title: Bioclaustration structures

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qj9-5qm-p4s
title: Bioclaustration structures

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28642358.v1
title: DNA viral contig sequences

description: DNA viral contig sequences
DOI: 10.3535/0pd-y7z-sg0
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pd1-anp-37l
title: Bauxite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12725621.v1
title: Sierra Nevada (USA) Snow Water Equivalent (SWE) Volume Time Series - Northern Sierra Nevada

description: This data set contains 1 April snow water equivalent (SWE) volumes for the northern region of Sierra Nevada, USA. The SWE volumes are derived by merging information from snow courses and a snow reanalysis. The data set file contains two columns: Year (column 1) and SWE in km<sup>3</sup> (column 2).<br>For more information about the domain, methods, and time series, refer to Huning and AghaKouchak (2020a).<br><br><b>Reference</b>Huning, L.S., and AghaKouchak, A. (2020a), Approaching 80 years of snow water equivalent information by merging different data streams, <i>Scientific Data</i>, 7, 333, https://doi.org/10.1038/s41597-020-00649-1.<br><b>As a condition of using data from this collection, you must cite this data collection and the corresponding publication: </b>1) Huning, L.S., and AghaKouchak, A. (2020b), Sierra Nevada (USA) snow water equivalent (SWE) volume time series, <i>figshare</i>, Collection, https://doi.org/10.6084/m9.figshare.c.5055518.<br>2) Huning, L.S., and AghaKouchak, A. (2020a), Approaching 80 years of snow water equivalent information by merging different data streams, <i>Scientific Data</i>, 7, 333, https://doi.org/10.1038/s41597-020-00649-1.
DOI: 10.6084/m9.figshare.25585242.v2
title: <b>Aridity regulates the responses of larger-scale stability to multiple resource supply in temperate grasslands</b>

description: All data that support the findings of this study is MRA. Sheet1：Biodiversity and stability ；Sheet2: Biodiversity and stability at aridity&lt;0.70；Sheet3: Biodiversity and stability at aridity&gt;0.70；Sheet4: Biodiversity and stability responses to number of added resources；Sheet5: Biodiversity and stability responses to number of added resources at aridity&lt;0.70；Sheet6: Biodiversity and stability responses to number of added resources at aridity&gt;0.70； Fa= The number of added resources. ARD= aridity(1-AI) ；ARDL=aridity level(1,&lt;0.70 ; 2, &gt;0.70); ANPP= community biomass；treatment: cont= control (without addition); 50%=add 50% water; N=nitrogen addition; P=phosphorus addition; K= potassium addition. Res= ANPP responses to number of added resources; MAP= mean annual precipitation (mm); MAT= mean annual temperature (℃). Dominance= dominant species abundance; AlphaR= alpha richness; BetaR= species spatial turnover (beta richness); GammaR=gamma richness; Spe_asyn=species asynchrony; Spa_asyn=spatial asynchrony; Spe_sta= species stability; Alpha_sta= alpha stability; Gamma_sta= gamma stability.
DOI: 10.3535/p1f-ns0-547
title: Magnesite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yvk-qb1-j4l
title: Diatomite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zh9-sf5-2r9
title: Sandstone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hvw-v9r-90r
title: Diopside

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vyk-7je-09q
title: Lazurite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/63d-96v-ccm
title: Rhodonite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/st9-y4q-ew5
title: Fluorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26053936.v1
title: Supplementary data for manuscript

description: Nucleotide and protein FASTA files of 263 reference <i>Bifidobacterium</i> genomes.
DOI: 10.6084/m9.figshare.28602989.v1
title: <b>Particulate organic carbon as an indicator of soil structural degradation</b>

description: Data containing measured bulk soil data and fractionated SOC data in NEC and BEL.
DOI: 10.6084/m9.figshare.28668524.v1
title: Matbench Discovery - Model Predictions for Diatomics

description: This dataset contains model predictions from various models evaluated on the
 Matbench Discovery benchmark for the diatomics task.

 Task description: Predict potential energy curves for diatomic molecules.

 For more information about the benchmark and models, visit:
 https://github.com/janosh/matbench-discovery.
DOI: 10.6084/m9.figshare.28675607.v1
title: <b>Causal relationships between Obesity, lipid specie and Sepsis: a two-step, two-sample Mendelian randomization study</b>

description: The study suggested a causal relationship between Obesity and Sepsis, which may be mediated by lipid species.
DOI: 10.6084/m9.figshare.7962824.v1
title: Paratydeidae Tanytydeus pogrebnyaki k-18364 tarsus I holotype

description: Hitachi KP-HD20A on Zeiss Imager A2 microscope <br>100x oil immersion<br> Original image stacks for descriptions of fossil mites of the family Paratydeidae from the late Eocene Rovno Amber. <br>Two species: <br>Scolotydaeus vlaskini n. sp.Housed in the amber collection of the Sсhmalhausen Institute of zoology NAS of Ukraine, Kiev, with collection number SIZK K‑1462 and Tanytydeus pogrebnyaki n. sp.<br>Housed in the amber collection of the Schmalhausen Institute of zoology NAS of Ukraine, Kiev, with collection number SIZK K‑18364. Compound microscopes Nikon E-800 with water immersion optics (40x and 60x) and Zeiss AxioImager A2 with dry (40x, 63x) and oil immersion optics (100x). Brightfield, polarized and differential interference contrast and incident illumination were used. Stacks of images, comprising multiple focal planes, were obtained with digital cameras Olympus OM-D E-M10II on Nikon microscope, Zeiss Axiocam 506 color and Hitachi KP-HD20A on Zeiss microscope. Stacks were corrected for colour, brightness and noise with Adobe Lightroom, then exported to JPEG format. <br>Combined images prepared with Helicon Focus 6.8.0, using algorithms A (mostly) and B with subsequent manual addition of significant details from the individual focal planes.
DOI: 10.3535/2lm-7hm-b5p
title: Chrysotile

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mgf-stq-edr
title: Arkose

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25219238.v1
title: Biomarkers of neuroinflammation in neurodegenerative sclerosis spreadsheet from Costa et al., 2024

description: Genetic polymorphisms in genes of the inflammatory pathways may increase the susceptibility to develop exacerbated neuroinflammatory reactions, as well as serve as a trigger for the apoptotic processes in neurodegenerative sclerosis. This spreadsheet sums up our data from a systematic review, in which we list the genetic polymorphisms statistically associated with ALS and MS susceptibility reported in neuroinflammatory pathway genes, enabling us to highlight potential biomarkers for each disease.
DOI: 10.3535/fpv-ey2-vsm
title: Talc

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t54-ts8-wzp
title: Arsenopyrite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.c.3719803_d2.v1
title: Additional file 2: of A fast and efficient python library for interfacing with the Biological Magnetic Resonance Data Bank

description: Profile of nmrstarlib execution. (TXT 27 kb)
DOI: 10.3535/ff1-tdq-4jh
title: Syenite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/g7z-74z-fxg
title: Agate

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16559721.v1
title: EEG/EMG sleep phenotyping in Dpyd knockout and wildtype mice (dpyd_ko_eeg_wide.xlsx)

description: EEG/EMG based sleep phenotypes in Dpyd knockout and wildtype littermate control mice (wide format)<br>
DOI: 10.6084/m9.figshare.6834743.v1
title: Table 1: Patient annotations

description: Sample annotations of the 556 high-risk neuroblastoma samples in the dataset, including clinical information and other information such as array platform and MYCN amplification status.
DOI: 10.6084/m9.figshare.8312153.v1
title: Appendix II

description: Attributable fraction of fractures to low bone mineral density in men and women (T-scores ≤ -2.5)
DOI: 10.25451/flinders.16881916.v1
title: Australian Child Wellbeing Project, 2014

description: The Australian Child Wellbeing Project (ACWP) is a child-centred study in which young people’s perspectives have been used to design and conduct Australia’s first major nationally representative and internationally comparable survey of wellbeing among young people aged 9-14 years. Particular attention was given to understanding the perspectives of seven groups of young people with specific experiences and needs that may have a bearing on their wellbeing: Aboriginal and Torres Strait Islander young people, culturally and linguistically diverse young people, young people with disability, young carers, young people in regional and remote Australia, materially disadvantaged young people, and young people in out-of-home care. The survey aimed to benchmark young people's wellbeing in Australia, provide the basis for international comparison of their wellbeing, and provide information to contribute to the development of effective services for young people’s healthy development. The survey instrument includes questions that are comparable with the international Health Behaviour in School Aged Children study (www.hbsc.org) and the international Children's World's study (www.isciweb.org). The ACWP survey was dstributed to a national probability sample of students in Years 4, 6 and 8 and was successfully completed during Term 3 2014 in 180 schools across Australia, with final sample of 5440 students. Please refer to the project website for more details: http://www.australianchildwellbeing.com.au<br><br>Methodology<br>Sampling Procedure: Multi-stage stratified random sample<br>Data Kind: Survey data<br>Response Rate: 12.3 percent (39.4 percent of schools, and 31.1 percent of students within those schools). See Technical Report Section 4 for further details.<br><br><br>Date coverage: 2014<br>Location: Australia
DOI: 10.3535/42l-33c-6bt
title: Pyrite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12121389.v3
title: o_covid-19.json

description: Facts that was used to synthesize COVID-19 pathogenesis
DOI: 10.17632/77sf2jr73z
title: A general program to compute two electron repulsion integrals

description: Title of program: PP-I-1982 Catalogue Id: ACEL_v1_0 Nature of problem Ab initio computations (Hartree-Fock and configuration interaction) of the electronic structure of molecules need evaluation of the two electron repulsion integrals. PP-I-1982 (Poughkeepsie Program - Integrals- 1982) calculates these with Cartesian Gaussian basis functions. Versions of this program held in the CPC repository in Mendeley Data ACEL_v1_0; PP-I-1982; 10.1016/0010-4655(83)90009-7 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.3535/em3-q45-sxg
title: Dolomitic marl

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/k0v-mmj-53a
title: Sandstone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.48420/21559638.v2
title: EDXRF of MXene synthesis products I

description: Perform EDXRF on Ti<sub>3</sub>C<sub>2</sub> MXene synthesis products to verify both composition and purity
DOI: 10.6084/m9.figshare.92820.v4
title: ISCA analysis for the quartet (missing grandfather), (missing grandmother), mother and aunt

description: This figure shows that the haploidentical states are well distinguished (contiguous green or yellow segments). Lacking information on the grandparents, it is impossible to distinguish between haploidentical maternal and haploidentical paternal for the mother-aunt comparison, hence the haploidentical states are shown as mixtures of green and yellow.
DOI: 10.3535/hd2-sme-81j
title: Muscovite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mrx-85k-j08
title: Limonite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.3549855.v1
title: Appendix C. IPCC models and bootstrap sampling results.

description: IPCC models and bootstrap sampling results.
DOI: 10.6084/m9.figshare.4307765.v1
title: Investigating the function of play bows in dog and wolf puppies (Canis lupus familiaris, Canis lupus occidentalis)

description: The data set includes all relevant information that was used to run GLMM in the paper "Investigating the function of play bows in dog and wolf puppies (Canis lupus familiaris, Canis lupus occidentals)." For additional information on the statistics conducted please see the manuscript.
DOI: 10.3535/ehq-ln2-q0s
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vnj-9et-vnz
title: Siltstone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23808483.v1
title: Phenotypic Plasticity of ‘Galega vulgar’ - data sets

description: Phenotypic Plasticity of ‘Galega vulgar’ - data sets
DOI: 10.6084/m9.figshare.24866586.v1
title: Natural carriage of Streptococcus pneumoniae is associated with increased experimental pneumococcal carriage but reduced conjugate vaccine efficacy in a human challenge model.

description: We investigated the relationship between natural and experimental pneumococcal carriage, focusing on the impact of natural carriage on vaccine efficacy. Statistical analyses were carried out according to a pre-specified Statistical Analysis Plan using R v.4.2.2 (R Development Core Team, Vienna, Austria) and GraphPad Prism v9.0.0 (Graph-Pad Software, San Diego, California, USA). Two key findings emerged: firstly, individuals with natural carriage were more likely to become experimental carriers, and secondly, the efficacy of the PCV-13 vaccine in preventing experimental carriage was reduced in those with natural carriage. Serotype exchange as well as co-colonisation with experimental carriage was observed in 15 participants. We concluded that natural carriage could impact vaccine efficacy in high-prevalence settings, emphasizing the importance of vaccine design targeting reductions in natural carriage. The use of carriage reduction as a trial endpoint was encouraged, along with the adoption of batched samples and molecular diagnostics to enhance trial efficiency.
DOI: 10.6084/m9.figshare.26213615.v1
title: Outdoor adventure education survey responses on pro-environmental behaviour intentions and learning mechanism domains.

description: Outdoor adventure education data.
DOI: 10.6084/m9.figshare.28478177.v1
title: data_song_shao

description: The data that support the findings of the above article.
DOI: 10.3535/gae-ef4-016
title: Phosphorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rq4-wb1-eml
title: Diatomite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.8327081.v2
title: Late Pleistocene and Holocene climate, bioclimate and vegetation

description: Terrestrial monthly temperature, precipitation, cloudiness, wind speed and relative humidity; 17 bioclimatic variables, and 3 vegetation variables for the last 120,000 years<br>
DOI: 10.3535/4n7-7q4-8x0
title: Marl

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fzk-da2-8wf
title: Travertine

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vt6-7ec-db2
title: marble

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6h9-7hn-q8d
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wyz-6zp-k63
title: marble

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q4r-3hs-n03
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wn0-5kt-dh8
title: Sandstone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22085786.v1
title: Table S6 the Kyoto Encyclopedia of Genes and Genomes (KEGG) database annotations

description: Table S6 the Kyoto Encyclopedia of Genes and Genomes (KEGG) database annotations