cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10936188
title: Post-drought community turnover and functional redundancy in a tropical forest understorey

description: Drought events are increasingly frequent, threatening the biodiversity of tropical forests. The understorey comprises a large fraction of the total plant species richness of these systems with the presence of Individual plants of some highly diverse Angiosperm families are patchily organized in the understorey of these communities. Here we quantified the effects of a drought on abundance and functional structures and on the ecosystem functioning of these patches Rubiaceae assemblages along a topographic gradient. We show that swarms of species can maintain biological diversity and stability in ecosystem functioning under drought in the understorey of a tropical forest. (Published in Journal Vegetation Science; Funded by Fundação de Amparo à Pesquisa e Inovação do Espírito Santo, FAPES).

If you have any query, write to: karinnasantos0@gmail.com
DOI: 10.15468/dl.6hvqt3
title: Occurrence Download

description: A dataset containing 235 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Smilax vaginata Decne."
 ]
}

 The dataset includes 235 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110709-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10936249
title: 1086006

description: .
DOI: 10.5281/zenodo.10936250
title: 1086006

description: .
DOI: 10.15468/dl.b3zmj6
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Smilax vanchingshanensis (F.T.Wang & Tang) F.T.Wang & Tang"
 ]
}

 The dataset includes 82 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110710-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10936253
title: peronia_peronii_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.10936254
title: peronia_peronii_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.15468/dl.kenyg8
title: Occurrence Download

description: A dataset containing 89 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Smilax verticalis Gagnep."
 ]
}

 The dataset includes 89 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110711-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vb9mz3
title: Occurrence Download

description: A dataset containing 388 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Smilax vitiensis (Seem.) A.DC."
 ]
}

 The dataset includes 388 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110712-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5tapz3
title: Occurrence Download

description: A dataset containing 90157 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "MediaType is Image",
 "ScientificName is Plantago lanceolata L."
 ]
}

 The dataset includes 90157 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110699-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ugeat
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Smilax wallichii Kunth"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110714-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x5pzv5
title: Occurrence Download

description: A dataset containing 16364 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "MediaType is Image",
 "ScientificName is Plantago media L."
 ]
}

 The dataset includes 16364 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110713-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2xj7gj
title: Occurrence Download

description: A dataset containing 413731 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 413731 records from 1632 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0110706-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48597/kx87-zqa8
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/mp27-p28v
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/n8hf-ac49
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/neyh-rnaz
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/nh6m-xchb
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/pm8p-jkbz
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/prtv-p8gs
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/q2qa-8d5h
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.6084/m9.figshare.13076882
title: Initial data for the paper of Invasive plant has higher resistance to native generalist herbivore than exotic non-invasive congener

description: The dataset contributes to Invasive plant has higher resistance to native generalist herbivore than exotic non-invasive congener.
DOI: 10.6084/m9.figshare.12552503
title: Additional file 4 of De novo transcriptome sequencing and analysis of salt-, alkali-, and drought-responsive genes in Sophora alopecuroides

description: Additional file 4: Table S3. Statistics of the number of transcription factors corresponding to each transcription factor family. This table provides the number of transcription factors corresponding to each transcription factor family.
DOI: 10.6084/m9.figshare.12552503.v1
title: Additional file 4 of De novo transcriptome sequencing and analysis of salt-, alkali-, and drought-responsive genes in Sophora alopecuroides

description: Additional file 4: Table S3. Statistics of the number of transcription factors corresponding to each transcription factor family. This table provides the number of transcription factors corresponding to each transcription factor family.
DOI: 10.6084/m9.figshare.12552494.v1
title: Additional file 3 of De novo transcriptome sequencing and analysis of salt-, alkali-, and drought-responsive genes in Sophora alopecuroides

description: Additional file 3: Table S2. Statistics of DEGs corresponding to KEGG metabolic pathways. This table provides the potential genes corresponding to KEGG metabolic pathways.
DOI: 10.6084/m9.figshare.12552512
title: Additional file 5 of De novo transcriptome sequencing and analysis of salt-, alkali-, and drought-responsive genes in Sophora alopecuroides

description: Additional file 5: Table S4. Primer sequences validated by qRT-PCR in this study. This table provides the primer sequences that were validated by qRT-PCR in this study.
DOI: 10.6084/m9.figshare.12552512.v1
title: Additional file 5 of De novo transcriptome sequencing and analysis of salt-, alkali-, and drought-responsive genes in Sophora alopecuroides

description: Additional file 5: Table S4. Primer sequences validated by qRT-PCR in this study. This table provides the primer sequences that were validated by qRT-PCR in this study.
DOI: 10.6084/m9.figshare.12028266.v1
title: Additional file 2 of Using the spike protein feature to predict infection risk and monitor the evolutionary dynamic of coronavirus

description: Additional file 2.
DOI: 10.48597/nkfv-ef6z
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.6084/m9.figshare.12028266
title: Additional file 2 of Using the spike protein feature to predict infection risk and monitor the evolutionary dynamic of coronavirus

description: Additional file 2.
DOI: 10.6084/m9.figshare.13076598
title: Additional file 1 of REW-ISA: unveiling local functional blocks in epi-transcriptome profiling data via an RNA expression-weighted iterative signature algorithm

description: Additional file 1. Table S1: The detailed information of real data. The information of real data. Experiments with light green background were not included in MeTDBV2.0 yet. Experiment ID: The index of experiments; Cell line: The cell line that MeRIP-Seq profiled. Expr_name in MeTDB V2.0: The retrieval information in MeTDBV2.0. If the data was not included in MeTDBV2.0, the GEO accession numbers were provided instead (indicated as light green background). Treatment: The treatment applied for the experiment. Reference: The title of the source reference. Reference ID: Reference number in the article.
DOI: 10.5281/zenodo.10730944
title: Data set_Phytoplankton pigment dynamics in marine lake fluctuating between stratified and holomictic euxinic conditions

description: Study site: Zmajevo oko - Rogoznica Lake small karstified sea lake on the eastern Adriatic coast of Croatia (43o32" N, 15o58" E) Physico-chemical parameters: Temperature (T, oC), salinity (S), dissolved oxygen (DO, mg/L) were measured in situ during sampling using a HQ40d multimeter probe (Hach Lange, Germany). For the determination of photosynthetic pigments, one liter of water was filtered at low vacuum onto glass fiber filters (0.7 μm GF/F) and stored at -80 oC until analysis. The filters were extracted by sonication in 4 mL of cold 90% acetone, followed by centrifugation to clarify the extracts. Chlorophylls and carotenoids were analyzed by reversed-phase HPLC according to Barlow et al. (1997). In brief, the extracts were mixed with 1 M ammonium acetate (1:1; v/v) and injected into an HPLC system, which consisted of a gradient solvent delivery system (Varian Star 9010), an injector (Rheodyne, model 7125), a Hypersil™ MOS -2 C8 HPLC column (150 x 4.6 mm, Thermo Scientific) and serially coupled spectrophotometric and spectrofluorimetric detectors. A binary linear gradient was used to separate the pigments. Solvent A was a mixture of methanol / 1 M ammonium acetate (70/30), while solvent B was methanol. Chlorophylls and carotenoids were detected by absorbance at 440 nm (Spectra Physics UV 2000), while phaeopigments were detected by fluorescence (Spectra Physics FL 3000) with excitation at 420 nm and emission at 672 nm. Data was acquired and processed using Varian Star 4.0 software. The qualitative and quantitative analyzes of the individual pigments were performed by external standard calibration with authentic pigment standards (VKI, Denmark). The total reduced sulfur species (RSStotal) were analyzed by electrochemical methods as previously described (Bura-Nakić et al. 2009; Marguš et al. 2015). The DOC and POC were analyzed using a TOC-Vcph analyzer (Schimadzu, Japan). The fractions were separated immediately after sampling by filtration through a pre-combusted 0.7 μm GF/F filter and stored until analysis (at -20°C). Samples for nutrient measurements were stored at -20 oC prior to analysis. Nitrate (NO3-), nitrite (NO2-), ammonium (NH4+), orthophosphate (PO43-) and silicate (SiO44-) were analyzed in unfiltered samples using a spectrophotometer (Strickland and Parsons, 1972).
DOI: 10.5281/zenodo.10730945
title: Data set_Phytoplankton pigment dynamics in marine lake fluctuating between stratified and holomictic euxinic conditions

description: Study site: Zmajevo oko - Rogoznica Lake small karstified sea lake on the eastern Adriatic coast of Croatia (43o32" N, 15o58" E) Physico-chemical parameters: Temperature (T, oC), salinity (S), dissolved oxygen (DO, mg/L) were measured in situ during sampling using a HQ40d multimeter probe (Hach Lange, Germany). For the determination of photosynthetic pigments, one liter of water was filtered at low vacuum onto glass fiber filters (0.7 μm GF/F) and stored at -80 oC until analysis. The filters were extracted by sonication in 4 mL of cold 90% acetone, followed by centrifugation to clarify the extracts. Chlorophylls and carotenoids were analyzed by reversed-phase HPLC according to Barlow et al. (1997). In brief, the extracts were mixed with 1 M ammonium acetate (1:1; v/v) and injected into an HPLC system, which consisted of a gradient solvent delivery system (Varian Star 9010), an injector (Rheodyne, model 7125), a Hypersil™ MOS -2 C8 HPLC column (150 x 4.6 mm, Thermo Scientific) and serially coupled spectrophotometric and spectrofluorimetric detectors. A binary linear gradient was used to separate the pigments. Solvent A was a mixture of methanol / 1 M ammonium acetate (70/30), while solvent B was methanol. Chlorophylls and carotenoids were detected by absorbance at 440 nm (Spectra Physics UV 2000), while phaeopigments were detected by fluorescence (Spectra Physics FL 3000) with excitation at 420 nm and emission at 672 nm. Data was acquired and processed using Varian Star 4.0 software. The qualitative and quantitative analyzes of the individual pigments were performed by external standard calibration with authentic pigment standards (VKI, Denmark). The total reduced sulfur species (RSStotal) were analyzed by electrochemical methods as previously described (Bura-Nakić et al. 2009; Marguš et al. 2015). The DOC and POC were analyzed using a TOC-Vcph analyzer (Schimadzu, Japan). The fractions were separated immediately after sampling by filtration through a pre-combusted 0.7 μm GF/F filter and stored until analysis (at -20°C). Samples for nutrient measurements were stored at -20 oC prior to analysis. Nitrate (NO3-), nitrite (NO2-), ammonium (NH4+), orthophosphate (PO43-) and silicate (SiO44-) were analyzed in unfiltered samples using a spectrophotometer (Strickland and Parsons, 1972).
DOI: 10.6084/m9.figshare.13076628
title: Additional file 1 of Gut microbiota from coronary artery disease patients contributes to vascular dysfunction in mice by regulating bile acid metabolism and immune activation

description: Additional file 1. Table S1 The bile acids profile in the faeces; Table S2 The bile acids profile in the serum; Table S3 Statistics for the metagenomic shotgun sequencing data of mice; Table S4 The assembly statistics of metagenomics data; Table S5 The significantly altered metagenomic pathways between Con and CAD; Table S6 Species abundance with significant differences between Con and CAD; Table S7 Differential expression of genes (DEGs) between the Con (n = 3) and CAD (n = 3) group in the liver; Table S8 Differential expression of genes (DEGs) between the Con (n=3) and CAD (n = 3) group in the ileum; Table S9 Inflammatory factors levels associated with cardiovascular disease between the GF, Con and CAD groups in the serum; Table S10 Primers for RT-PCR.
DOI: 10.6084/m9.figshare.13076628.v1
title: Additional file 1 of Gut microbiota from coronary artery disease patients contributes to vascular dysfunction in mice by regulating bile acid metabolism and immune activation

description: Additional file 1. Table S1 The bile acids profile in the faeces; Table S2 The bile acids profile in the serum; Table S3 Statistics for the metagenomic shotgun sequencing data of mice; Table S4 The assembly statistics of metagenomics data; Table S5 The significantly altered metagenomic pathways between Con and CAD; Table S6 Species abundance with significant differences between Con and CAD; Table S7 Differential expression of genes (DEGs) between the Con (n = 3) and CAD (n = 3) group in the liver; Table S8 Differential expression of genes (DEGs) between the Con (n=3) and CAD (n = 3) group in the ileum; Table S9 Inflammatory factors levels associated with cardiovascular disease between the GF, Con and CAD groups in the serum; Table S10 Primers for RT-PCR.
DOI: 10.48597/jznr-g3vk
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/qajn-4354
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/qfu7-49ut
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/rd74-8dzd
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/rtga-w5s7
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/s2aw-r2r3
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/s55c-zxyr
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/sj22-shj2
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/t8jt-t368
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/tcg9-qz8p
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/tk7k-6umd
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/tmf8-eu4e
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/uesb-7gx2
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/w5gk-zwph
title: Measurement of Particle_number_size_distribution at Hohenpeissenberg

description: Measurement of Particle_number_size_distribution at Hohenpeissenberg
DOI: 10.48597/wff4-h7g7
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/wpfk-tqay
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/wxvt-dykg
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/xtnx-tn38
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/xuce-7ggt
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/xypg-46ty
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/yprj-t57d
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/ytec-26yy
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/z3ta-njvn
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/zbsc-kgk2
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/zknv-anmf
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/zmy8-n4bc
title: Measurement of Particle_number_size_distribution at Kosetice (NOAK)

description: Measurement of Particle_number_size_distribution at Kosetice (NOAK)
DOI: 10.48597/2hbc-aznh
title: Ammonium at Agia Marina Xyliatou / Cyprus Atmospheric Observatory

description: Measurement of Ammonium at Agia Marina Xyliatou / Cyprus Atmospheric Observatory
DOI: 10.48597/2mr4-ebeb
title: Inorganics in precipitation at Zarra

description: Measurement of Inorganics in precipitation at Zarra
DOI: 10.48597/356a-w94v
title: Inorganics in precipitation at Els Torms

description: Measurement of Inorganics in precipitation at Els Torms
DOI: 10.48597/3kn4-jpjg
title: Precipitation_amount at O Saviñao

description: Measurement of Precipitation_amount at O Saviñao
DOI: 10.48597/3vsk-jmx5
title: PAHs (polycyclic aromatic hydrocarbons) at Agia Marina Xyliatou / Cyprus Atmospheric Observatory

description: Measurement of PAHs (polycyclic aromatic hydrocarbons) at Agia Marina Xyliatou / Cyprus Atmospheric Observatory
DOI: 10.48597/45fr-4c64
title: PCDD/F at Ispra

description: Measurement of PCDD/F at Ispra
DOI: 10.48597/4a69-x3se
title: Precipitation_amount at Els Torms

description: Measurement of Precipitation_amount at Els Torms
DOI: 10.48597/4cvj-ydkz
title: Pm25_mass at Penausende

description: Measurement of Pm25_mass at Penausende
DOI: 10.48597/4g7u-gjnn
title: Inorganics in air and particle phase at Agia Marina Xyliatou / Cyprus Atmospheric Observatory

description: Measurement of Inorganics in air and particle phase at Agia Marina Xyliatou / Cyprus Atmospheric Observatory
DOI: 10.48597/4pmj-r7am
title: Precipitation_amount at Víznar

description: Measurement of Precipitation_amount at Víznar
DOI: 10.48597/4q79-hqwc
title: Methane at Zeppelin mountain (Ny-Ålesund)

description: Measurement of Methane at Zeppelin mountain (Ny-Ålesund)
DOI: 10.48597/5em8-xbks
title: Precipitation_amount at Penausende

description: Measurement of Precipitation_amount at Penausende
DOI: 10.48597/5vdn-u2aw
title: Inorganics in air and particle phase at Doñana

description: Measurement of Inorganics in air and particle phase at Doñana
DOI: 10.48597/5yfx-zur6
title: Sulphur_dioxide at Lesnoy

description: Measurement of Sulphur_dioxide at Lesnoy
DOI: 10.48597/67p5-f4bg
title: Relative_humidity at Els Torms

description: Measurement of Relative_humidity at Els Torms