cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.10309223
title: MOESM6 of Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network

description: Additional file 6: Figure S4. Comparison of RNAseq and Q-PCR expression profiles of seven selected genes. aguA = alpha-glucuronidase (NRRL3_01069), xlnD = beta-xylosidase (NRRL3_02451), xynB = endoxylanase (NRRL3_01648), xlnR = (hemi-)cellulolytic transcriptional activator, rglB = rhamnogalacturonan lyase (NRRL3_10115), rgxA = exorhamnogalacturonase (NRRL3_02832), rgaeA = rhamnogalacturonan acetyl esterase (NRRL3_00169). Graphs depict the log2 of the fold change of the averaged expression values of the wild type vs the indicated mutant.
DOI: 10.6084/m9.figshare.10309217
title: MOESM5 of Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network

description: Additional file 5: Figure S3. Heatmap reflecting the differential expression of CAZYme-encoding genes The polysaccharides the genes are related to are indicated in the grid behind the heat map.
DOI: 10.6084/m9.figshare.10309217.v1
title: MOESM5 of Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network

description: Additional file 5: Figure S3. Heatmap reflecting the differential expression of CAZYme-encoding genes The polysaccharides the genes are related to are indicated in the grid behind the heat map.
DOI: 10.6084/m9.figshare.10309223.v1
title: MOESM6 of Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network

description: Additional file 6: Figure S4. Comparison of RNAseq and Q-PCR expression profiles of seven selected genes. aguA = alpha-glucuronidase (NRRL3_01069), xlnD = beta-xylosidase (NRRL3_02451), xynB = endoxylanase (NRRL3_01648), xlnR = (hemi-)cellulolytic transcriptional activator, rglB = rhamnogalacturonan lyase (NRRL3_10115), rgxA = exorhamnogalacturonase (NRRL3_02832), rgaeA = rhamnogalacturonan acetyl esterase (NRRL3_00169). Graphs depict the log2 of the fold change of the averaged expression values of the wild type vs the indicated mutant.
DOI: 10.6084/m9.figshare.10309208
title: MOESM4 of Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network

description: Additional file 4: Table S2. Expression of selected CAZymes involved in the degradation of plant biomass in A. niger. The comparisons between strains are ΔxlnR over the wild-type and xkiA1 over the wild-type. The cut-off for differential expression is log2 fold change &gt; 0.6 (cells marked red if up-regulated) and log2 fold change &lt;0.6 (cells marked green if down-regulated) and adjusted p-value &lt;=0.05(cells marked yellow).
DOI: 10.6084/m9.figshare.10309202
title: MOESM3 of Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network

description: Additional file 3: Table S1. GO-term enrichment analysis of differentially expressed genes.
DOI: 10.6084/m9.figshare.10309208.v1
title: MOESM4 of Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network

description: Additional file 4: Table S2. Expression of selected CAZymes involved in the degradation of plant biomass in A. niger. The comparisons between strains are ΔxlnR over the wild-type and xkiA1 over the wild-type. The cut-off for differential expression is log2 fold change &gt; 0.6 (cells marked red if up-regulated) and log2 fold change &lt;0.6 (cells marked green if down-regulated) and adjusted p-value &lt;=0.05(cells marked yellow).
DOI: 10.6084/m9.figshare.10309202.v1
title: MOESM3 of Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network

description: Additional file 3: Table S1. GO-term enrichment analysis of differentially expressed genes.
DOI: 10.6084/m9.figshare.10309190
title: MOESM2 of Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network

description: Additional file 2: Figure S2. GO-term enrichment analysis of differentially expressed genes.
DOI: 10.6084/m9.figshare.10309181
title: MOESM1 of Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network

description: Additional file 1: Figure S1. Principle Component Analysis (PCA) demonstrating the high reproducibility of the biological replicates.
DOI: 10.6084/m9.figshare.10309190.v1
title: MOESM2 of Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network

description: Additional file 2: Figure S2. GO-term enrichment analysis of differentially expressed genes.
DOI: 10.6084/m9.figshare.10309181.v1
title: MOESM1 of Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network

description: Additional file 1: Figure S1. Principle Component Analysis (PCA) demonstrating the high reproducibility of the biological replicates.
DOI: 10.6084/m9.figshare.10309148
title: Additional file 6 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 6. Excluded at full-text/unobtainable.
DOI: 10.6084/m9.figshare.10309154
title: Additional file 7 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 7. Systematic map database.
DOI: 10.6084/m9.figshare.10309148.v2
title: Additional file 6 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 6. Excluded at full-text/unobtainable.
DOI: 10.6084/m9.figshare.10309136
title: Additional file 4 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 4. Relevant reviews.
DOI: 10.6084/m9.figshare.10309154.v2
title: Additional file 7 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 7. Systematic map database.
DOI: 10.6084/m9.figshare.10309148.v1
title: MOESM6 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 6. Excluded at full-text/unobtainable.
DOI: 10.6084/m9.figshare.10309154.v1
title: MOESM7 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 7. Systematic map database.
DOI: 10.6084/m9.figshare.10309136.v2
title: Additional file 4 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 4. Relevant reviews.
DOI: 10.6084/m9.figshare.10309127
title: Additional file 3 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 3. Benchmark list.
DOI: 10.6084/m9.figshare.10309136.v1
title: MOESM4 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 4. Relevant reviews.
DOI: 10.6084/m9.figshare.10309127.v2
title: Additional file 3 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 3. Benchmark list.
DOI: 10.6084/m9.figshare.10309109
title: Additional file 1 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 1. ROSES form for systematic map report.
DOI: 10.6084/m9.figshare.10309127.v1
title: MOESM3 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 3. Benchmark list.
DOI: 10.6084/m9.figshare.10309109.v2
title: Additional file 1 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 1. ROSES form for systematic map report.
DOI: 10.6084/m9.figshare.10309109.v1
title: MOESM1 of Bridging Indigenous and science-based knowledge in coastal and marine research, monitoring, and management in Canada

description: Additional file 1. ROSES form for systematic map report.
DOI: 10.6084/m9.figshare.10308617
title: raw data.xlsx

description: This study retrospectively assessed the data of 95 patients with ARDS caused by severe pneumonia. Patients were divided into NGS group and no-NGS group. Clinical characteristics, laboratory examination, ICU cost and prognosis in the two groups were compared. Meanwhile, compared patients in NGS group, mNGS and routine detection methods had different detection efficiency for bacteria, fungi, viruses, unusual pathogens and co-infections.
DOI: 10.6084/m9.figshare.10308605
title: LLM105-fork2.xlsx

description: Comparation of experimental and simulation results
DOI: 10.6084/m9.figshare.10308608
title: Contribution of each step

description: The contribution of each step to the overall reaction was revealed.
DOI: 10.6084/m9.figshare.10308596
title: Zeng et al. 2019 JGR-Planets Micro-FTIR spectroscopy of lunar pyroclastic and impact glasses as a new diagnostic tool to discern them

description: The geochemistry data and raw FTIR data used in this manuscript
DOI: 10.6084/m9.figshare.10308605.v2
title: LLM105-fork2.xlsx

description: Comparation of experimental and simulation results
DOI: 10.6084/m9.figshare.10308608.v1
title: Contribution of each step

description: The contribution of each step to the overall reaction was revealed.
DOI: 10.6084/m9.figshare.10308605.v1
title: LLM105-fork2.xlsx

description: Comparation of experimental and simulation results
DOI: 10.6084/m9.figshare.10308593
title: data of subjective social class, perceived control, employment pressure, university graduates

description: A sample of 318 Chinese university graduates from medical university completed the MacArthur Ladder Scale of Subjective Social Status, a College Graduate Employment Pressure Questionnaire, and a Perceived Control Questionnaire
DOI: 10.6084/m9.figshare.10308596.v1
title: Zeng et al. 2019 JGR-Planets Micro-FTIR spectroscopy of lunar pyroclastic and impact glasses as a new diagnostic tool to discern them

description: The geochemistry data and raw FTIR data used in this manuscript
DOI: 10.6084/m9.figshare.10308617.v1
title: data.xlsx

description: This study retrospectively assessed the data of 105 patients with ARDS caused by severe pneumonia. Patients were divided into NGS group and no-NGS group. Clinical characteristics, laboratory examination, ICU cost and prognosis in the two groups were compared. Meanwhile, compared patients in NGS group, mNGS and routine detection methods had different detection efficiency for bacteria, fungi, viruses, unusual pathogens and co-infections.
DOI: 10.6084/m9.figshare.10308566
title: ZF class data - sharable.sav

description: This data set is drawn from Prof. Ed Hally's Zombie Federalism experiment, conducted from the Spring 2018 semester through the present at Ferrum College.<br>
DOI: 10.6084/m9.figshare.10308557
title: LAR mice and NAFLD

description: LysMCre ARNT mice. Liver studies
DOI: 10.6084/m9.figshare.10308566.v1
title: ZF class data - sharable.sav

description: This data set is drawn from Prof. Ed Hally's Zombie Federalism experiment, conducted from the Spring 2018 semester through the present at Ferrum College.<br>
DOI: 10.6084/m9.figshare.10308542
title: Table S1-S12.xlsx

description: Major element, trace element, rare earth elements, iron speciation, and TOC contents of the Xiaotan section (S1), Shatan section (S2), Xy1 well (S3), Jinsha section (S4),Songtao (S5),Yk1(S6), Yuanjia section (S7), Xa1well (S8-9), Longbizui (S10), Yd2 wells (S11) and Zigui sections(S12).
DOI: 10.6084/m9.figshare.10308557.v1
title: LAR mice and NAFLD

description: LysMCre ARNT mice. Liver studies
DOI: 10.6084/m9.figshare.10308542.v1
title: Table S1-S12.xlsx

description: Major element, trace element, rare earth elements, iron speciation, and TOC contents of the Xiaotan section (S1), Shatan section (S2), Xy1 well (S3), Jinsha section (S4),Songtao (S5),Yk1(S6), Yuanjia section (S7), Xa1well (S8-9), Longbizui (S10), Yd2 wells (S11) and Zigui sections(S12).
DOI: 10.6084/m9.figshare.10308482
title: Giant virus diversity and host interactions through global metagenomics

description: This data set contains the giant virus metagenome assembled genomes (GVMAGs) of estimated high quality (HQ), medium quality (MQ) and low quality (LQ), as described in "Giant virus diversity and host interactions through global metagenomics".<br>_Version November 2019<br>Please contact Frederik Schulz (fschulz@lbl.gov) for questions regarding the data and their usage.<br>
DOI: 10.6084/m9.figshare.10308407
title: Distinguishability trial: results

description: Full results (n=384) for distinguishability trial.
DOI: 10.26180/5dd1df6aaa55c
title: Towards the understanding of stress-induced mineral dissolution via molecular-scale simulations

description: All the data of the paper "Towards the understanding of stress-induced mineral dissolution via molecular-scale simulations" are archived in this public domain repository. The thermo files are the input data to analyse the simulations in the paper.
DOI: 10.6084/m9.figshare.10308407.v2
title: Distinguishability trial: results

description: Full results (n=384) for distinguishability trial.
DOI: 10.6084/m9.figshare.10308407.v1
title: Results from Northumbria crowd Turing Test study

description: Full results (n=384) for crowd Turing test studies performed at Northumbria University, Autumn 2019.
DOI: 10.6084/m9.figshare.10308296
title: Decadel change of climate extremes indices

description: In this directory, there are 107 files:Name lists of 50 regions(csv and xlsx), 150 municipalites(xlsx)38 indices for 50 sub-regions38 indices for 150 municipalities38 indices for 8964 grid points
DOI: 10.6084/m9.figshare.10308281.v1
title: Changes of climate extremes indices for maps for 2050s and 2080s

description: In this directory, there are 38 csv files. Data in this directory is for generating spatial distribution maps of the 38 climate extremes indices . <br>In each table, there are 43 colums include id, Longitude, Latitude, 5 percentiles [5%,25%,50%,75% and 95%] for each of the 4 RCPs for 2 periods [2050s and 2080]<br>In each table, there are 8965 rows (head and 8964 grids).<br><br>
DOI: 10.6084/m9.figshare.10308296.v1
title: Decadel change of climate extremes indices

description: In this directory, there are 107 files:Name lists of 50 regions(csv and xlsx), 150 municipalites(xlsx)38 indices for 50 sub-regions38 indices for 150 municipalities38 indices for 8964 grid points
DOI: 10.6084/m9.figshare.10308272
title: Axlor data

description: The original micro-ct scans, the derived segmentation files, and 3D volumes from the fossils found in Axlor (Dima, Biscay, Norther Iberian Peninsula) during Barandiarán's excavations.These fossils are described by Gómez-Olivencia et al. American Journal of Physical Anthropology
DOI: 10.6084/m9.figshare.10308275
title: CONSORT 2010 Checklist.doc

description: checklist for the manuscript entitled 'How to promote discipine without tough-love during pregnancy'.<br>
DOI: 10.6084/m9.figshare.10308059
title: Annal values of ensemble mean for provincial averages of Ontario

description: CSV format annual averages of 43 climate extrems indices and for basic climate variables (mean, maximum and minimum temperature, and precipiataion) for 1981-2099. Each table includes five columns: Year, RCP26,RCP45, RCP60 and RCP85; and 119 rows: 1981, 1982,...,2098, 2099.
DOI: 10.6084/m9.figshare.10306184
title: LB 23 y LB 24 RAW (2).zip

description: 476421
DOI: 10.6084/m9.figshare.10305542
title: LB 23 y LB 24 RAW (2).zip

description: 476421 LB 23 y LB 24 RAW
DOI: 10.6084/m9.figshare.10306184.v1
title: LB 23 y LB 24 RAW (2).zip

description: 476421
DOI: 10.6084/m9.figshare.10305506
title: Raw data for: Functional losses in ground spider communities due to habitat-structure degradation under tropical land-use change

description: Current dataset presents raw data on ground spider communities behind the research article "Functional losses in ground spider communities due to habitat-structure degradation under tropical land-use change" by Anton M. Potapov, Nadine Dupérré, Malte Jochum, Kerstin Dreczko, Bernhard Klarner, Andrew D. Barnes, Valentyna Krashevska, Katja Rembold, Holger Kreft, Ulrich Brose, Rahayu Widyastuti, Danilo Harms, Stefan Scheu, published in Ecology. <br>The study was conducted in the framework of the EFForTS project (http://www.uni-goettingen.de/en/310995.html), investigating ecological and socioeconomic changes associated with the transformation of lowland rainforest into agricultural systems. Four land-use systems – rainforest (forest, F), jungle rubber agroforest (J), rubber monoculture (R) and oil palm monoculture (O) were studied across two regions (Harapan and Bukit Duabelas landscape) in Jambi Province, Sumatra, Indonesia. <br>The data set consists of four files - two community matrices of spiders, one table describing the sampling sites and one table describing the taxonomy and traits of spiders. The data based on two collection events with different methods, different years and different sampling areas. Thus, the two community matrices are not directly comparable.
DOI: 10.6084/m9.figshare.10305431
title: MS-DArT-seq - BRASUZ1 files

description: Input files to support the paper: "A cost-effective approach to DNA methylation detection by Methyl Sensitive DArT sequencing."<br>The code to reproduce the results presented in the paper can be find at GitHub: <i>https://github.com/wendelljpereira/ms-dart-seq</i>.<br>Besides the deposited data, it is necessary the download of the <i>E. grandis </i>genome and genome annotation v.2.0 (<i> (<i>Egrandis_297_v2.0.softmasked.fa</i>; Egrandis_297_v2.0.gene_exons.gff3</i>) from Phytozome (https://phytozome.jgi.doe.gov/pz/portal.html) to reproduce all results.<br>
DOI: 10.6084/m9.figshare.10305407
title: Systematic review of child restraint system interventions (2007–2018)

description: <b>Objective:</b> To systematically review and summarize articles evaluating the effectiveness of child restraint system (CRS) interventions targeting parents/caregivers’ knowledge of, overall rates of and/or proper use of CRSs published in a recent time period. <b>Methods:</b> Using multiple databases, we identified peer-reviewed journal articles published between January 1, 2007 and December 31, 2018 using selected key search terms. Inclusion criteria were: (1) evaluation of an intervention/program for child passenger safety targeting a parent or caregiver of a child (2) quantitative data-based results (i.e., change in knowledge, behavior, or observed outcomes), (3) English-language, and (4) peer-reviewed journal publication. Through a systematic review process and peer consensus, n = 23 articles met inclusion criteria. References of these articles were reviewed for inclusion using the same process and n = 12 additional articles were identified. <b>Results:</b> A total of n = 35 articles met inclusion criteria. Of the n = 35 articles, n = 9 were randomized controlled trials (RCTs), n = 4 were cluster RCTs, n = 11 were nonrandomized trials, and n = 11 were pretest post-test studies. Types of interventions included face-to-face education (n = 26), web/video-based education (n = 8) or written educational materials (n = 1). Of the articles reviewed, n = 20 involved distribution of free or subsidized CRSs to some or all subjects. N = 20 articles involved trained CRS technicians and/or CRS installation check-points. In terms of outcomes measured, n = 3 articles assessed changes in knowledge of CRS use, n = 22 assessed changes in CRS behaviors (which includes self-report or observed behavior change), and n = 10 assessed changes in both CRS knowledge and behaviors. All articles (n = 3) that measured changes in knowledge as their only outcome demonstrated positive effects while articles measuring behavioral outcomes (self-report or observed) (n = 32) had mixed results. <b>Conclusions:</b> This review included a wide range of articles of heterogeneous methodologies, sample sizes, and outcomes measured. Although different approaches to CRS interventions were effective in increasing awareness and knowledge, the effects on CRS use behaviors – whether self-reported or observed – were mixed. Future research is needed to increase appropriate CRS use and reduce the burden of motor vehicle crash-related injuries among children.
DOI: 10.6084/m9.figshare.10305431.v1
title: MS-DArT-seq - BRASUZ1 files

description: Input files to support the paper: "A cost-effective approach to DNA methylation detection by Methyl Sensitive DArT sequencing."<br>The code to reproduce the results presented in the paper can be find at GitHub: <i>https://github.com/wendelljpereira/ms-dart-seq</i>.<br>Besides the deposited data, it is necessary the download of the <i>E. grandis </i>genome and genome annotation v.2.0 (<i> (<i>Egrandis_297_v2.0.softmasked.fa</i>; Egrandis_297_v2.0.gene_exons.gff3</i>) from Phytozome (https://phytozome.jgi.doe.gov/pz/portal.html) to reproduce all results.<br>