cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.zkcpns
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coreus marginatus (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0202752-220831081235567/datasets/export for details.
DOI: 10.15468/dl.dmgbu9
title: Occurrence Download

description: A dataset containing 587997 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "StateProvince is Rio Grande do Sul",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 587997 records from 301 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021709-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e8whv5
title: Occurrence Download

description: A dataset containing 124372 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tadorna variegata (J.F.Gmelin, 1789)"
 ]
}

 The dataset includes 124372 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006368-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/wkj2xpkj7s.1
title: The critical role of gangue minerals in chalcopyrite hydrometallurgy and Cu-recovery

description: Chalcvopyrite (Wallaroo Mines; South Australian Museum collection, catalogue number G22621; grain size=118-200 µm and 2-2.8 mm, 0.1 g and 0.06-0.15 g) was leached in various acidic, alkaline, conventional and novel, more sustanaible lixiviants in an orbital shaking water bath at 50°C for 43 days. The data comprise mineralogy of chalcopyrite fraction via XRD , pregnant lixiviant compositions via ICP-OES and chalcopyrite surface/passivation species images and S-speciation via FIB-SEM and μXANES.
DOI: 10.17632/ngfhykxgkw
title: RIPK3 drives macrophage transition in peripheral injured nerve to promote neuropathic pain

description: The Celatlas Spatial sequencing for human neuroma samples.
DOI: 10.15468/dl.cp2543
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Closterium Nitzsch ex Ralfs, 1848",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((31.8862 -21.3285,30.5701 -20.3186,30.5701 -24.0715,35.5909 -24.0715,35.6007 -24.0157,35.6007 -23.8125,35.4969 -23.7035,35.6007 -23.165,35.6007 -22.9702,35.227 -22.2482,34.6862 -21.6944,34.013 -21.3095,33.5 -21.1593,32.9675 -21.1092,32.4352 -21.1612,31.8862 -21.3285))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042506-250525065834625/datasets/export for details.
DOI: 10.17632/ngfhykxgkw.1
title: RIPK3 drives macrophage transition in peripheral injured nerve to promote neuropathic pain

description: The Celatlas Spatial sequencing for human neuroma samples.
DOI: 10.15468/dl.x8r274
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lemna gibba L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((15.4784 -23.4046,15.4933 -24.0715,20.509 -24.0715,20.509 -24.0455,20.0952 -23.5072,19.9968 -23.017,19.7843 -22.5405,19.1988 -21.8785,18.5972 -21.5447,17.8859 -21.3993,17.1626 -21.4805,16.5332 -21.7596,16.1257 -22.0882,15.8234 -22.4662,15.606 -22.8993,15.4784 -23.4046))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042505-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.15599416
title: Supplemental materials related to the publication "Voice-related challenges experienced by transgender and gender diverse individuals in Belgium"

description: This record contains supplemental materials related to the publication "Voice-related challenges experienced by transgender and gender diverse individuals in Belgium." Specifically, it includes the categorisation of participants into subgroups based on their self-described gender identity (supplemental material A). Additionally, the record provides the questionnaire used for data collection, available in three languages: English, French, and Dutch (supplemental material B). Finally, it contains tables with descriptive data for the full participant group as well as for individual subgroups, presented by topic (supplemental material C).
DOI: 10.5281/zenodo.15599417
title: Supplemental materials related to the publication "Voice-related challenges experienced by transgender and gender diverse individuals in Belgium"

description: This record contains supplemental materials related to the publication "Voice-related challenges experienced by transgender and gender diverse individuals in Belgium." Specifically, it includes the categorisation of participants into subgroups based on their self-described gender identity (supplemental material A). Additionally, the record provides the questionnaire used for data collection, available in three languages: English, French, and Dutch (supplemental material B). Finally, it contains tables with descriptive data for the full participant group as well as for individual subgroups, presented by topic (supplemental material C).
DOI: 10.17632/jb89dp34d8
title: Secondary Library Validation Surface PrPC - Differentiated

description: These are the raw .fastq files from NGS runs of the custom secondary validation CRISPR/Cas9 KO library performed in differentiated CAD5 cells. They are labeled Brie_PrPC_Low or Brie_PrPC_High to indicate whether these sgRNA sequences were captured in the "PrPC Low" or "PrPC High" populations during FACS. Bioinformatic analysis was performed using the MAGeCK-VISPR and MAGeCKFlute pipelines using the paired function to compare high and low samples directly.
DOI: 10.17632/jb89dp34d8.1
title: Secondary Library Validation Surface PrPC - Differentiated

description: These are the raw .fastq files from NGS runs of the custom secondary validation CRISPR/Cas9 KO library performed in differentiated CAD5 cells. They are labeled Brie_PrPC_Low or Brie_PrPC_High to indicate whether these sgRNA sequences were captured in the "PrPC Low" or "PrPC High" populations during FACS. Bioinformatic analysis was performed using the MAGeCK-VISPR and MAGeCKFlute pipelines using the paired function to compare high and low samples directly.
DOI: 10.17632/tmkn3zsjts
title: Secondary Library Validation Surface PrPC - Undifferentiated

description: These are the raw .fastq files from NGS runs of the custom secondary validation CRISPR/Cas9 KO library performed in undifferentiated CAD5 cells. They are labeled Brie_PrPC_Low or Brie_PrPC_High to indicate whether these sgRNA sequences were captured in the "PrPC Low" or "PrPC High" populations during FACS. Bioinformatic analysis was performed using the MAGeCK-VISPR and MAGeCKFlute pipelines using the paired function to compare high and low samples directly.
DOI: 10.17632/tmkn3zsjts.1
title: Secondary Library Validation Surface PrPC - Undifferentiated

description: These are the raw .fastq files from NGS runs of the custom secondary validation CRISPR/Cas9 KO library performed in undifferentiated CAD5 cells. They are labeled Brie_PrPC_Low or Brie_PrPC_High to indicate whether these sgRNA sequences were captured in the "PrPC Low" or "PrPC High" populations during FACS. Bioinformatic analysis was performed using the MAGeCK-VISPR and MAGeCKFlute pipelines using the paired function to compare high and low samples directly.
DOI: 10.5281/zenodo.15655251
title: Köben Apotheke

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.5281/zenodo.15655252
title: Köben Apotheke

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.17632/5pfdty7zd6
title: Genome-wide Brie CAD5 Surface PrPC - Undifferentiated

description: These are the raw .fastq files from NGS runs of the genome-wide CRISPR/Cas9 KO library (Brie) performed in undifferentiated CAD5 cells. They are labeled Brie_PrPC_Low or Brie_PrPC_High to indicate whether these sgRNA sequences were captured in the "PrPC Low" or "PrPC High" populations during FACS. Bioinformatic analysis was performed using the MAGeCK-VISPR and MAGeCKFlute pipelines using the biological replicates function to compare "PrP Low" and "PrP High" samples directly.
DOI: 10.17632/5pfdty7zd6.1
title: Genome-wide Brie CAD5 Surface PrPC - Undifferentiated

description: These are the raw .fastq files from NGS runs of the genome-wide CRISPR/Cas9 KO library (Brie) performed in undifferentiated CAD5 cells. They are labeled Brie_PrPC_Low or Brie_PrPC_High to indicate whether these sgRNA sequences were captured in the "PrPC Low" or "PrPC High" populations during FACS. Bioinformatic analysis was performed using the MAGeCK-VISPR and MAGeCKFlute pipelines using the biological replicates function to compare "PrP Low" and "PrP High" samples directly.
DOI: 10.17632/vs9fwhbcvj
title: Genome-wide Brie CAD5 Surface PrPC - Differentiated PrPC High

description: These are the raw .fastq files from NGS runs of the genome-wide CRISPR/Cas9 KO library (Brie) performed in differentiated CAD5 cells. They are labeled Brie_PrPC_High to indicate that these sgRNA sequences were captured in the "PrPC High" populations during FACS. Bioinformatic analysis was performed using the MAGeCK-VISPR and MAGeCKFlute pipelines using the biological replicates function to compare between "PrP Low" and "PrP High" samples.
DOI: 10.17632/vs9fwhbcvj.1
title: Genome-wide Brie CAD5 Surface PrPC - Differentiated PrPC High

description: These are the raw .fastq files from NGS runs of the genome-wide CRISPR/Cas9 KO library (Brie) performed in differentiated CAD5 cells. They are labeled Brie_PrPC_High to indicate that these sgRNA sequences were captured in the "PrPC High" populations during FACS. Bioinformatic analysis was performed using the MAGeCK-VISPR and MAGeCKFlute pipelines using the biological replicates function to compare between "PrP Low" and "PrP High" samples.
DOI: 10.15468/dl.nm42ux
title: Occurrence Download

description: A dataset containing 4060 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "OccurrenceStatus is Present",
 "TaxonKey is Puffinus puffinus (Brunnich, 1764)"
 ]
}

 The dataset includes 4060 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042507-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/p5t6d78zn8
title: Genome-wide Brie CAD5 Surface PrPC - Differentiated PrPC Low

description: These are the raw .fastq files from NGS runs of the genome-wide CRISPR/Cas9 KO library (Brie) performed in differentiated CAD5 cells. They are labeled Brie_PrPC_Low to indicate that these sgRNA sequences were captured in the "PrPC Low" populations during FACS. Bioinformatic analysis was performed using the MAGeCK-VISPR and MAGeCKFlute pipelines using the biological replicates function to compare between "PrP Low" and "PrP High" samples.
DOI: 10.17632/p5t6d78zn8.1
title: Genome-wide Brie CAD5 Surface PrPC - Differentiated PrPC Low

description: These are the raw .fastq files from NGS runs of the genome-wide CRISPR/Cas9 KO library (Brie) performed in differentiated CAD5 cells. They are labeled Brie_PrPC_Low to indicate that these sgRNA sequences were captured in the "PrPC Low" populations during FACS. Bioinformatic analysis was performed using the MAGeCK-VISPR and MAGeCKFlute pipelines using the biological replicates function to compare between "PrP Low" and "PrP High" samples.
DOI: 10.17632/bpwj3tjrph
title: Supplementary Information

description: Supplementary Information
DOI: 10.25625/mgctrr/kdkvsu
title: replication1_unmetneed.do

description: Stata dofile to create dataset for analysis
DOI: 10.17632/bpwj3tjrph.2
title: Supplementary Information

description: Supplementary Information
DOI: 10.25625/mgctrr/gco58v
title: replication2_unmetneed.do

description: Stata dofile to create tables and figures
DOI: 10.25625/mgctrr/kizh3a
title: replication2_unmetneed_analysis.tab

description: Analysis data
DOI: 10.25625/mgctrr/qucirs
title: replication1_unmetneed_raw.tab

description: Raw data
DOI: 10.25625/mgctrr/bxk7lp
title: replication_codebook.xlsx

description: Codebook for raw data
DOI: 10.17632/627n7hcjcw
title: OPTIR spectra of JB_S01_B_F_1 (White Fragment) particles from marine sediment samples collected in Juara Beach, Tioman Island in August 2024 using a OPTIR Spectrometer at Krakow University, Poland

description: Particles from JB_S01_B_F_1 were simply placed the particles on a glass slide at once, there was no further fixation.
DOI: 10.17632/627n7hcjcw.1
title: OPTIR spectra of JB_S01_B_F_1 (White Fragment) particles from marine sediment samples collected in Juara Beach, Tioman Island in August 2024 using a OPTIR Spectrometer at Krakow University, Poland

description: Particles from JB_S01_B_F_1 were simply placed the particles on a glass slide at once, there was no further fixation.
DOI: 10.15468/dl.hffgda
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lemna gibba L.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.5395 -28.5786,20.509 -28.5786,20.509 -32.9007,25.5395 -32.9007,25.5395 -28.5786))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042508-250525065834625/datasets/export for details.
DOI: 10.15468/dl.ywm33a
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Closterium Nitzsch ex Ralfs, 1848",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((27.1586 -33.5889,28.2048 -32.9007,25.5395 -32.9007,25.5395 -34.1098,25.6468 -34.1222,25.7787 -34.0734,25.7098 -33.9109,25.8639 -33.797,26.4806 -33.8473,27.1586 -33.5889))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042509-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/6vn96h8bfm
title: Non-classical two-stage pathways for the formation of amorphous ferric arsenate: Influence of temperature, pH, and stoichiometry

description: In Chang et al. we investigated the formation process of amorphous ferric arsenate with in situ SAXS and proposed two-stage non-classical pathways based on the variation of particle size and structure. Data that appear in all figures and tables in the research were listed in this dataset.
DOI: 10.17632/6vn96h8bfm.2
title: Non-classical two-stage pathways for the formation of amorphous ferric arsenate: Influence of temperature, pH, and stoichiometry

description: In Chang et al. we investigated the formation process of amorphous ferric arsenate with in situ SAXS and proposed two-stage non-classical pathways based on the variation of particle size and structure. Data that appear in all figures and tables in the research were listed in this dataset.
DOI: 10.15468/dl.qu87gm
title: Occurrence Download

description: A dataset containing 695274 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is AD AVH Data",
 "TaxonKey is Plantae",
 "HasCoordinate is true",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 },
 {
 "not" : {
 "Issue" : [
 "is Coordinate uncertainty meters invalid"
 ]
 }
 },
 {
 "not" : {
 "Issue" : [
 "is Presumed swapped coordinate"
 ]
 }
 },
 {
 "not" : {
 "Issue" : [
 "is Presumed negated longitude"
 ]
 }
 },
 {
 "not" : {
 "Issue" : [
 "is Presumed negated latitude"
 ]
 }
 }
 ]
}

 The dataset includes 695274 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042502-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/s5yw2p3w5z.2
title: Heat tolerance mechanisms in bread wheat: Insights from flag leaves and spike tissues.

description: Description of the data and file structure

This data was collected to study the effects of heat stress during ear peep in wheat genotypes with contrasting heat tolerance (Tolerant: RAJ3765, HD2932 and Susceptible: HD2329, HD2733) on physiology, yield and yield components, and proteomics of flag leaves and spike tissues. 

The figures, tables, and supplementary figures in this study were prepared using the data provided in the supplementary tables.

The supplementary data

Supplementary Table S1-S10.xlsx

Supplementary Figures S1-S6 and Methods.pdf

Other publicly accessible locations of the data:

 All mass spectrometry proteomics data has been deposited into the ProteomeXchange Consortium via the PRIDE. The dataset is available via ProteomeXchange with the identifier PXD048499.
DOI: 10.17632/6xx3cgp2nc
title: Impact of Pacific Walker Circulation driven by Interdecadal Pacific Oscillation on precipitation variability in the North China Monsoon Marginal Region over the past five centuries

description: The Asian Summer Monsoon system has exerted significant impact on the ecological environment and socio-economic development of North China. Understanding the variability of monsoon precipitation and its underlying drivers in the context of anthropogenic warming necessitates the development of high-resolution precipitation reconstructions extending beyond the instrumental record. This study presents a novel tree ring network comprising 869 cores from 12 site chronologies in the North China Monsoon Marginal Region (NCMMR). A Nested Principal Component Regression model is used to reconstruct August-to-July precipitation variability from 1512 to 2021. The results indicate that, compared to the preceding five centuries, the probability of extreme high and low precipitation events increased by ~9 % and ~ 2 %, respectively, during the Current Warming Period (CWP, 1850–2021), with a higher long-term mean precipitation of 465.39 mm. The standard deviation and coefficient of variation for precipitation during the CWP (48.24 mm and 10.36 %, respectively) exceed those of the Historical Period (1512–1849) (36.89 mm and 8.07 %, respectively), highlighting an increase in precipitation variability over time. Analysis of global sea surface temperature patterns reveals a strong linkage between precipitation and the Interdecadal Pacific Oscillation (IPO). This is supported by a significant negative correlation between precipitation and the IPO index (P &lt; 0.001), alongside the IPO's substantial contribution (25 % of explained variance) to precipitation variability. Additionally, precipitation exhibits a significant positive correlation with the Pacific Walker Circulation (PWC) index (P &lt; 0.001). Climate model simulations further demonstrate that IPO-driven variations in PWC intensity regulate interdecadal precipitation variability in the NCMMR using water vapor transport anomalies.
DOI: 10.17632/6xx3cgp2nc.1
title: Impact of Pacific Walker Circulation driven by Interdecadal Pacific Oscillation on precipitation variability in the North China Monsoon Marginal Region over the past five centuries

description: The Asian Summer Monsoon system has exerted significant impact on the ecological environment and socio-economic development of North China. Understanding the variability of monsoon precipitation and its underlying drivers in the context of anthropogenic warming necessitates the development of high-resolution precipitation reconstructions extending beyond the instrumental record. This study presents a novel tree ring network comprising 869 cores from 12 site chronologies in the North China Monsoon Marginal Region (NCMMR). A Nested Principal Component Regression model is used to reconstruct August-to-July precipitation variability from 1512 to 2021. The results indicate that, compared to the preceding five centuries, the probability of extreme high and low precipitation events increased by ~9 % and ~ 2 %, respectively, during the Current Warming Period (CWP, 1850–2021), with a higher long-term mean precipitation of 465.39 mm. The standard deviation and coefficient of variation for precipitation during the CWP (48.24 mm and 10.36 %, respectively) exceed those of the Historical Period (1512–1849) (36.89 mm and 8.07 %, respectively), highlighting an increase in precipitation variability over time. Analysis of global sea surface temperature patterns reveals a strong linkage between precipitation and the Interdecadal Pacific Oscillation (IPO). This is supported by a significant negative correlation between precipitation and the IPO index (P &lt; 0.001), alongside the IPO's substantial contribution (25 % of explained variance) to precipitation variability. Additionally, precipitation exhibits a significant positive correlation with the Pacific Walker Circulation (PWC) index (P &lt; 0.001). Climate model simulations further demonstrate that IPO-driven variations in PWC intensity regulate interdecadal precipitation variability in the NCMMR using water vapor transport anomalies.