cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/0p0-n07-6xh
title: Struthanthus orbicularis (Kunth) Blume

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/q5t-61b-dw1
title: Pouzolzia guatemalana (Blume) Wedd.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/xae-08z-ynk
title: Struthanthus cansjerifolius (Oliv.) Eichler

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/9pn-ptb-fgp
title: Xylopia L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/q1v-213-1wy
title: Stachytarpheta frantzii Pol.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/b8l-2ey-5mv
title: Witheringia L'Hér.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/rr9-5tt-81j
title: Stachytarpheta frantzii Pol.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/egf-je7-lck
title: Sphaeradenia sphagnicola Harling

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/tpb-8qf-pbx
title: Stachytarpheta cayennensis (Rich.) Vahl

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/bmx-gwj-5ys
title: Neustanthus phaseoloides (Roxb.) Benth.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/e0h-47k-cfr
title: Sphaeradenia sphagnicola Harling

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/pg3-spk-5e0
title: Struthanthus quercicola (Cham. & Schltdl.) G. Don

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/0qj-yb3-rak
title: Stelis Sw.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/2xj-mvp-ptr
title: Unonopsis storkii Standl. & L. O. Williams

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/42q-d80-zlk
title: Witheringia coccoloboides (Dammer) Hunz.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/64w-zcn-l3c
title: Sphenoclea zeylanica Gaertn.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.15468/dl.792yhc
title: Occurrence Download

description: A dataset containing 4382 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Aneides flavipunctatus)"
 ]
}

 The dataset includes 4382 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000234-250710112747441/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6v23qm
title: Occurrence Download

description: A dataset containing 1132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Kielmeyera rubriflora",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 1132 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013463-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a63gc7
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sternarchorhynchus goeldii",
 "DecimalLatitude is not null",
 "DecimalLongitude is not null"
 ]
}

 The dataset includes 68 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013464-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bz9bny
title: Occurrence Download

description: A dataset containing 8763 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ailanthus altissima",
 "Geometry POLYGON((-130 20, -62 20, -62 54, -130 54, -130 20))",
 "Year is greater than or equal to 2014",
 "Year is less than or equal to 2019",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 8763 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013462-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ku5rvy
title: Occurrence Download

description: A dataset containing 1321 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arthonia ilicina",
 "Country is one of (Norway)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1986",
 "Year is less than or equal to 2025",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Machine Observation"
 ]
 }
 }
 ]
}

 The dataset includes 1321 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013465-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cpks3v
title: Occurrence Download

description: A dataset containing 483 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vigna trilobata",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 483 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013467-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57760/sciencedb.37437
title: Scales and Irregularities of Columnar Jointed Rock Masses: Insights from Field Investigations and Thermo-mechanical Coupling Numerical Simulations
title: Scales and Irregularities of Columnar Jointed Rock Masses: Insights from Field Investigations and Thermo-mechanical Coupling Numerical Simulations

description: This dataset encompasses all essential data underpinning the manuscript "Scales and Irregularities of Columnar Jointed Rock Masses: Insights from Field Investigations and Thermo-mechanical Coupling Numerical Simulations". It comprises two core components:(1) Geometric characteristic data of columnar jointed rock masses acquired via terrestrial laser scanning at the Haojiagou Volcanic Crater, Changle County, Shandong Province, China;(2) Geometric characteristic data of columnar jointed rock masses and corresponding numerical simulation command scripts (including FLAC3D input files and FISH functions) generated through thermo-mechanical coupling simulations.
description: This dataset encompasses all essential data underpinning the manuscript "Scales and Irregularities of Columnar Jointed Rock Masses: Insights from Field Investigations and Thermo-mechanical Coupling Numerical Simulations". It comprises two core components:(1) Geometric characteristic data of columnar jointed rock masses acquired via terrestrial laser scanning at the Haojiagou Volcanic Crater, Changle County, Shandong Province, China;(2) Geometric characteristic data of columnar jointed rock masses and corresponding numerical simulation command scripts (including FLAC3D input files and FISH functions) generated through thermo-mechanical coupling simulations.
DOI: 10.57760/sciencedb.35392
title: High-energy proton dataset from the NOAA-15 satellite.
title: NOAA15数据集

description: This dataset contains high-energy proton flux measurements obtained by the NOAA-15 satellite from 2013 to 2024, covering four integral energy channels: &gt;16 MeV, &gt;35 MeV, &gt;70 MeV, and &gt;140 MeV. Data files are named following the convention “noaa15+YYYYMMDD+proton_flux.txt”. Each file is formatted using semicolon-separated fields and includes the following information: time (year; month; day; hour; minute; second), satellite identifier (satID), orbital altitude (Alt), geographic latitude (Lat) and longitude (Lon), geomagnetic activity indices (Dst and Kp), magnetic local time (MLT), and a set of geomagnetic parameters, including Bmin (Bo), Bmir (B or Bm), Lm, L* (Lstar), I, K, K^(1/2), Φ, log10(Φ), hmin, and hmin_lon. In addition, the dataset provides integral proton fluxes for four energy channels: P6 (&gt;16 MeV), P7 (&gt;35 MeV), P8 (&gt;70 MeV), and P9 (&gt;140 MeV), with units of particles·cm⁻²·s⁻¹.Geomagnetic parameters were computed using the IRBEM library (https://prbem.github.io/IRBEM/), with the IGRF-13 internal geomagnetic field model and the T89 external field model.
description: This dataset contains high-energy proton flux measurements obtained by the NOAA-15 satellite from 2013 to 2024, covering four integral energy channels: &gt;16 MeV, &gt;35 MeV, &gt;70 MeV, and &gt;140 MeV. Data files are named following the convention “noaa15+YYYYMMDD+proton_flux.txt”. Each file is formatted using semicolon-separated fields and includes the following information: time (year; month; day; hour; minute; second), satellite identifier (satID), orbital altitude (Alt), geographic latitude (Lat) and longitude (Lon), geomagnetic activity indices (Dst and Kp), magnetic local time (MLT), and a set of geomagnetic parameters, including Bmin (Bo), Bmir (B or Bm), Lm, L* (Lstar), I, K, K^(1/2), Φ, log10(Φ), hmin, and hmin_lon. In addition, the dataset provides integral proton fluxes for four energy channels: P6 (&gt;16 MeV), P7 (&gt;35 MeV), P8 (&gt;70 MeV), and P9 (&gt;140 MeV), with units of particles·cm⁻²·s⁻¹.Geomagnetic parameters were computed using the IRBEM library (https://prbem.github.io/IRBEM/), with the IGRF-13 internal geomagnetic field model and the T89 external field model.
DOI: 10.57760/sciencedb.37429
title: Protective immunity against Helicobacter pylori induced by a single dose of an mRNA-based UreB vaccine candidate in mice
title: Protective immunity against Helicobacter pylori induced by a single dose of an mRNA-based UreB vaccine candidate in mice

description: The dataset includes figures of mRNA-based H. pylori vaccine candidate design and characterisation in vitro, humoral immune responses detected via ELISA after a single dose of LNP/mRNA-UreB vaccination, cell-mediated immune responses detected via ELISpot assay after a single dose of LNP/mRNA-UreB vaccination, the protective efficacy conferred by a single dose of LNP/mRNA-UreB vaccination.
description: The dataset includes figures of mRNA-based H. pylori vaccine candidate design and characterisation in vitro, humoral immune responses detected via ELISA after a single dose of LNP/mRNA-UreB vaccination, cell-mediated immune responses detected via ELISpot assay after a single dose of LNP/mRNA-UreB vaccination, the protective efficacy conferred by a single dose of LNP/mRNA-UreB vaccination.
DOI: 10.57760/sciencedb.37432
title: Dataset for "Examination of the role of exotic shapes in determining the characteristics of the fission barrier in hypernuclei within a relativistic mean-field model"
title: Dataset for "Examination of the role of exotic shapes in determining the characteristics of the fission barrier in hypernuclei within a relativistic mean-field model"

description: This is the dataset for the article titled “Examination of the role of exotic shapes in determining the characteristics of the fission barrier in hypernuclei within a relativistic mean-field model” published in Physical Review C. The dataset include the figures, the data for the figure, and python codes using to plot the figures.
description: This is the dataset for the article titled “Examination of the role of exotic shapes in determining the characteristics of the fission barrier in hypernuclei within a relativistic mean-field model” published in Physical Review C. The dataset include the figures, the data for the figure, and python codes using to plot the figures.
DOI: 10.15468/dl.mzbtpb
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Year is greater than or equal to 1900",
 "TaxonKey is Entoplocamia aristulata"
 ]
}

 The dataset includes 105 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013468-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57760/sciencedb.37430
title: Polarization-Encoded Multi-Focus Stitched Imaging Based on All-Dielectric Metasurface Engineering
title: Polarization-Encoded Multi-Focus Stitched Imaging Based on All-Dielectric Metasurface Engineering

description: Conventional optical imaging systems rely on complex lenses and polarizing structures to achieve imaging of microscopic objects and field-of-view expansion, resulting in bulky system volumes and intricate designs. This paper proposes a polarization-encoded multi-focus stitching imaging method based on all-dielectric metalenses to overcome the aforementioned limitations. We design a polarization-multiplexed metalens that enables dynamic multi-focus modulation depending on the incident polarization state. Under right-handed circularly polarized light incidence, eight focal spots are generated; under left-handed circularly polarized light, four focal spots are generated; and under linearly polarized light incidence, all twelve focal spots are activated simultaneously. By employing this metalens for multi-focus stitching imaging of a resolution target, its capability to enhance the field of view and imaging quality is verified. Finally, as a proof of concept, we digitally process the captured information using computational imaging algorithms such as convolution and stitching to reconstruct a fundus blood vessel image. Simulation results validate the feasibility of the proposed approach for large field-of-view, high-resolution biological imaging. This work demonstrates the significant potential of polarization-multiplexed metasurfaces in the field of integrated, high-performance computational imaging.
description: Conventional optical imaging systems rely on complex lenses and polarizing structures to achieve imaging of microscopic objects and field-of-view expansion, resulting in bulky system volumes and intricate designs. This paper proposes a polarization-encoded multi-focus stitching imaging method based on all-dielectric metalenses to overcome the aforementioned limitations. We design a polarization-multiplexed metalens that enables dynamic multi-focus modulation depending on the incident polarization state. Under right-handed circularly polarized light incidence, eight focal spots are generated; under left-handed circularly polarized light, four focal spots are generated; and under linearly polarized light incidence, all twelve focal spots are activated simultaneously. By employing this metalens for multi-focus stitching imaging of a resolution target, its capability to enhance the field of view and imaging quality is verified. Finally, as a proof of concept, we digitally process the captured information using computational imaging algorithms such as convolution and stitching to reconstruct a fundus blood vessel image. Simulation results validate the feasibility of the proposed approach for large field-of-view, high-resolution biological imaging. This work demonstrates the significant potential of polarization-multiplexed metasurfaces in the field of integrated, high-performance computational imaging.
DOI: 10.57760/sciencedb.37312
title: Genomic and plastomic resources for the Bambusa tuldoides and Bambusa rigida complex (Poaceae: Bambusoideae)
title: Genomic and plastomic resources for the Bambusa tuldoides and Bambusa rigida complex (Poaceae: Bambusoideae)

description: Title: Genomic and plastomic resources for the Bambusa tuldoides and Bambusa rigida complex (Poaceae: Bambusoideae)Abstract: This dataset provides comprehensive genomic resources for investigating the taxonomic relationship between Bambusa tuldoides and Bambusa rigida. It contains whole-genome resequencing (WGR) raw data and assembled complete chloroplast genomes (plastomes) for 14 woody bamboo accessions. These include 11 representative individuals of the B. tuldoides–B. rigida complex (sampled from major distribution areas, including type localities) and three outgroup species (Bambusa multiplex, Bambusa emeiensis, and Dendrocalamus brandisii).The WGR data were generated using the DNBSEQ-T7 platform with a paired-end sequencing strategy (PE150). The libraries were prepared with an average insert size of 350 bp, achieving a target sequencing depth of approximately 35× for each sample. These high-depth data provide a robust foundation for identifying nuclear SNPs and InDels to evaluate population genetic structure and differentiation.Additionally, we provide 14 complete chloroplast genomes assembled using GetOrganelle based on the WGR reads. These plastomes offer high-resolution maternal markers for phylogenetic reconstruction. This dataset is crucial for the integrative taxonomic revision of Bambusa species and serves as a valuable resource for future evolutionary studies in the tribe Bambuseae.
description: Title: Genomic and plastomic resources for the Bambusa tuldoides and Bambusa rigida complex (Poaceae: Bambusoideae)Abstract: This dataset provides comprehensive genomic resources for investigating the taxonomic relationship between Bambusa tuldoides and Bambusa rigida. It contains whole-genome resequencing (WGR) raw data and assembled complete chloroplast genomes (plastomes) for 14 woody bamboo accessions. These include 11 representative individuals of the B. tuldoides–B. rigida complex (sampled from major distribution areas, including type localities) and three outgroup species (Bambusa multiplex, Bambusa emeiensis, and Dendrocalamus brandisii).The WGR data were generated using the DNBSEQ-T7 platform with a paired-end sequencing strategy (PE150). The libraries were prepared with an average insert size of 350 bp, achieving a target sequencing depth of approximately 35× for each sample. These high-depth data provide a robust foundation for identifying nuclear SNPs and InDels to evaluate population genetic structure and differentiation.Additionally, we provide 14 complete chloroplast genomes assembled using GetOrganelle based on the WGR reads. These plastomes offer high-resolution maternal markers for phylogenetic reconstruction. This dataset is crucial for the integrative taxonomic revision of Bambusa species and serves as a valuable resource for future evolutionary studies in the tribe Bambuseae.
DOI: 10.57760/sciencedb.37379
title: Underwater pipeline images
title: Underwater pipeline images

description: A total of 20 videos were acquired using an in-house developed underwater ROV equipped with an optical imaging system comprising an HD USB low-light camera (Blue Robotics, Model: BR-100126) and LED illumination units (Blue Robotics LUMEN-VP, 1,500 lm). The videos were recorded at a resolution of 1080p and a frame rate of 30 frames per second (fps) under varying illumination conditions and across diverse underwater environments, including muddy waters, sandy seabeds, and regions with dense algal growth. From the recorded footage, image frames were extracted randomly for subsequent DL-based network training.
description: A total of 20 videos were acquired using an in-house developed underwater ROV equipped with an optical imaging system comprising an HD USB low-light camera (Blue Robotics, Model: BR-100126) and LED illumination units (Blue Robotics LUMEN-VP, 1,500 lm). The videos were recorded at a resolution of 1080p and a frame rate of 30 frames per second (fps) under varying illumination conditions and across diverse underwater environments, including muddy waters, sandy seabeds, and regions with dense algal growth. From the recorded footage, image frames were extracted randomly for subsequent DL-based network training.
DOI: 10.57760/sciencedb.37309
title: Structural Basis of Nucleosome Deubiquitination by the Bidentate Calypso/Asx Complex
title: Structural Basis of Nucleosome Deubiquitination by the Bidentate Calypso/Asx Complex

description: The Polycomb Repressive Complex 1 (PRC1) and PR-DUB constitute a canonical pair of histone-modifying enzymes that deposit and remove monoubiquitinated H2A at lysine 119 (H2AK119ub1), serving as a model of dynamic epigenetic regulation. In humans, PR-DUB, composed of BAP1 and ASXL1, functions as a monomeric complex, while the Drosophila homolog Calypso/Asx forms a bidentate dimer (Calypso2: Asx2) with an unclear chromatin engagement mechanism. Here, we present its cryo-EM structure bound to a nucleosome, revealing the molecular basis of interaction. Surprisingly, only one Calypso/Asx unit engages the nucleosome in a conformation similar to human BAP1/ASXL1, while the second remains disengaged. Structural and biochemical analysis of the positively charged Calypso C-terminus suggests a “spreading” potential of the bidentate complex along chromatin, which was validated in vitro using nucleosome arrays. These findings support a model in which the bidentate Calypso/Asx complex enables processive deubiquitination along chromatin via alternating or cooperative engagement.
description: The Polycomb Repressive Complex 1 (PRC1) and PR-DUB constitute a canonical pair of histone-modifying enzymes that deposit and remove monoubiquitinated H2A at lysine 119 (H2AK119ub1), serving as a model of dynamic epigenetic regulation. In humans, PR-DUB, composed of BAP1 and ASXL1, functions as a monomeric complex, while the Drosophila homolog Calypso/Asx forms a bidentate dimer (Calypso2: Asx2) with an unclear chromatin engagement mechanism. Here, we present its cryo-EM structure bound to a nucleosome, revealing the molecular basis of interaction. Surprisingly, only one Calypso/Asx unit engages the nucleosome in a conformation similar to human BAP1/ASXL1, while the second remains disengaged. Structural and biochemical analysis of the positively charged Calypso C-terminus suggests a “spreading” potential of the bidentate complex along chromatin, which was validated in vitro using nucleosome arrays. These findings support a model in which the bidentate Calypso/Asx complex enables processive deubiquitination along chromatin via alternating or cooperative engagement.
DOI: 10.15468/dl.hjt6kb
title: Occurrence Download

description: A dataset containing 1570051 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen)",
 "Geometry POLYGON((-129.67 38.44,-114.54 38.44,-114.54 42.28,-129.67 42.28,-129.67 38.44))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY-NC 4.0, CC-BY 4.0, CC0 1.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 1570051 records from 397 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013332-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.