cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/p4zsv-vaw84
title: MEFs (Rho-) Chan Lab

description: Mef cell line (Rho-) Chan Lab
description: <strong>Tilt Series Date:</strong> 2012-05-29</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Murine embryonic fibroblast (MEFs)</p>
<strong>Strain:</strong> Primary cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Mefs from Chan Lab. Contact person in Chan lab was H. Ngo. Cells were grown on grids, frozen and imaged at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> whole cells grown on grids</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-05-29-37/3dimage_69433/</p>12may29_C135_1_MEFnomitoDNA_AT3BT10014_part82_20.rec,  Reconstruction (Pixel Size 2.0 nm), 722.6 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        12may29_C135_1_MEFnomitoDNA_AT3BT10014.mrc,  Tilt Series (Pixel Size 0.5 nm), 677.3 MB  
        
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DOI: 10.22002/kca7e-9af92
title: COS7 VPS4DN+pNLGFP

description: Cos7 cells transfected with VPS4DN (0.5 ug) and pNLGFP provirus construct (4 ug). Sample #C126
description: <strong>Tilt Series Date:</strong> 2012-05-04</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Cercopithecus aethiops (monkey, African green)</p>
<strong>Strain:</strong> COS-7 ATCC CRL-1651</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> VPS4DN construct provided by Wes Sundquist. pNLGFP construct provided by Irvin Chen, UCLA. Cells transfected, frozen and imaged at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> whole cells grown on grids and transfected with lipofectamine</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-05-04-30/3dimage_69256/</p>12may04_C126_3_pnlDN_Cos7_AT6BT1_0001_full.rec,  Reconstruction (Pixel Size 2.0 nm), 619.4 MB  
        
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        12may04_C126_3_pnlDN_Cos7_AT6BT1_0001.mrc,  Tilt Series (Pixel Size 0.5 nm), 677.3 MB  
        
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DOI: 10.5281/zenodo.16947717
title: GeoFireGuard
title: Servizio open data di monitoraggio e protezione delle aree a rischio incendio

description: (IT) Dall'esigenza di fornire dati sempre più aggiornati sui rischi naturali e antropici a causa dalla crisi climatica, nasce GeoFireGuard, il servizio open data di monitoraggio e protezione delle aree a rischio incendio attraverso l'utilizzo di dati geospaziali messi a disposizione dalle costellazioni Sentinel del programma Copernicus dell'Unione Europea/ESA; HS2 ed ERA5, Landsat, EMIT, GIBS, Aqua e Terra, TRMM, e GPM, IMERG, servizio FIRMS della NASA/USGS degli USA. Area di interesse: Vulture Alto-Bradano (Basilicata - Italia).

(EN) Born out of the need to provide increasingly up-to-date data on natural and human-induced risks driven by the climate crisis, GeoFireGuard is an open data service for monitoring and protecting areas at risk of wildfires. It leverages geospatial data made available by the Sentinel constellations of the European Union/ESA Copernicus programme; HS2 and ERA5, Landsat, EMIT, GIBS, Aqua and Terra, TRMM, and GPM, IMERG, and the FIRMS service by NASA/USGS (USA). Area of interest: Vulture Alto-Bradano (Basilicata - Italy).
DOI: 10.22002/02cgk-22p31
title: Wild type control

description: Raw data files of Wild type control
description: <strong>Tilt Series Date:</strong> 2009-08-01</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, PEACH</p>
<strong>Collaborators and Roles:</strong> Experiments were done by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Exponential phase NA1000 cells.</p>
<strong>Sample Preparation:</strong> 10 nm gold </p>
  zla2009-08-01-113_slicer19403.jpg: flagella Lujia
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-08-01-113/rawdata/</p>09aug01a_noadd1a_113.mrc,  Tilt Series (Pixel Size 1.2 nm), 1.0 GB  
        
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        09aug01a_noadd1a_113_part.rec,  Reconstruction (Pixel Size 2.4 nm), 367.0 MB  
        
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DOI: 10.15468/dl.yj9xev
title: Occurrence Download

description: A dataset containing 1240 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ethiopia",
 "GadmGid is ETH.10.19_1",
 "IucnRedListCategory is one of (CR, EN, VU)"
 ]
}

 The dataset includes 1240 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045616-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/pt5dd-t2w80
title: Pseudoalteromonas Iuteoviolacea MP129

description: P Iuteo DvipABhcpI Dbact2 whole cells from liquid culture
description: <strong>Tilt Series Date:</strong> 2013-07-12</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Pseudoalteromonas luteoviolacea</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: 10.0 μm,  magnification: 26000x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> purified and processed by Gregor, Collaboration with Newman lab, taken at Janelia Farms</p>
<strong>Purification / Growth Conditions / Treatment:</strong> liquid culture</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, Yi-Wei1</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2013-07-12-4/rawdata/</p>2013_07_12_JF_MP129_b_0003.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.3 GB  
        
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        2013_07_12_JF_MP129_b_0003_2k_secs_full.rec,  Reconstruction (Pixel Size 1.68 nm), 775.1 MB  
        
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DOI: 10.22002/8asdw-te870
title: Pseudoalteromonas Iuteoviolacea MP125

description: Chloroform purification from P Iuteo DvipABhcpI DBP Dsheath
description: <strong>Tilt Series Date:</strong> 2013-06-29</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Pseudoalteromonas luteoviolacea</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: 10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> purified and processed by Gregor, Collaboration with Newman lab</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Chloroform Purification</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, Yi-Wei1</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2013-06-29-20/rawdata/</p>2013_06_29_mp125_0032.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
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        2013_06_29_mp125_0032_2k_secs.rec,  Reconstruction (Pixel Size 1.97 nm), 370.6 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.m9eyy8
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argentina anserina",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 43 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045617-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/pgdp5-4vr51
title: SS214

description: SS214: Caulobacter stalkband mutant (overexpression of StpAB)CB15N CC2476::CC2476-mcherry) pPxyl-CC2477-CC2476, kanR
description: <strong>Tilt Series Date:</strong> 2012-06-08</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -12.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Martin Thanbichler</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown overnight in PYE. Diluted 1/20 in M2G-P + 0.3% and grown for 76 hours at 30 degrees.</p>
<strong>Sample Preparation:</strong> COncentrated at 4000 x G for 5 min.Plunge frozen in ethane propane mix.</p>
  aba2012-06-08-4_slicer10106.jpg: Caulobacter crescentus .  vesicle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-06-08-4/rawdata/</p>SS214_4.mrc,  Tilt Series (Pixel Size 0.78 nm), 1.0 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        SS214_4_full.rec,  Reconstruction (Pixel Size 1.56 nm), 516.1 MB  
        
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DOI: 10.15468/dl.etqm45
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argentina anserina",
 "Country is Chile",
 "HasCoordinate is true"
 ]
}

 The dataset includes 28 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045618-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s8wj2k
title: Occurrence Download

description: A dataset containing 552957 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (Africa, Asia)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bubulcus ibis"
 ]
}

 The dataset includes 552957 records from 269 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045514-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/ynv7n-cc769
title: UU 2803- A413T delta P1P2

description: E.coli mutant A413T (locked in the CheA off state) with P1P2 deletions in CheA
description: <strong>Tilt Series Date:</strong> 2012-08-30</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSF tomo, IMOD, tomo3D</p>
<strong>Collaborators and Roles:</strong> John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> cells grown to log phase in TB medium, lysed with penicillin for 1 hour</p>
<strong>Sample Preparation:</strong> plunge frozen in R2/2 Quantifoil grids in liquid ethane/propane</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-08-30-21/rawdata/</p>2803atlas10021.mrc,  Tilt Series (Pixel Size 0.33 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2012-08-30-21/rawdata/2803atlas10021.mrc"
        > <i class="download icon"></i> Download </a></p>

        2803atlas10021_full.rec,  Reconstruction (Pixel Size 0.66 nm), 2.8 GB  
        
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DOI: 10.22002/y2rx5-a9p75
title: Eco 082509 MP17

description: Escherichia coli, 09sep10b_082509MP17ly_014,
description: <strong>Tilt Series Date:</strong> 2009-09-10</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> 13.10.1 Martin</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> cultured by Martin Pilhofer; data collected by Martin Pilhofer; processed by Martin Pilhofer</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, blotting 1/-2/2/0/1/4/200</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2009-09-10-29/rawdata/</p>09sep10b_082509MP17ly_014.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
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        > <i class="download icon"></i> Download </a></p>

        09sep10b_082509MP17ly_014_full.rec,  Reconstruction (Pixel Size 1.9 nm), 838.9 MB  
        
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        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.ptj89p
title: Occurrence Download

description: A dataset containing 3910392 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Year 2000-2020"
 ]
}

 The dataset includes 3910392 records from 2951 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045557-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15542469
title: Kaiserslautern Löwen-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.5281/zenodo.15542470
title: Kaiserslautern Löwen-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.15468/dl.x9wsgv
title: Occurrence Download

description: A dataset containing 316 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Issue is one of (Zero coordinate, Coordinate out of range, Coordinate invalid, Coordinate rounded, Geodetic datum invalid, Geodetic datum assumed WGS84, Coordinate reprojected, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate accuracy invalid, Coordinate precision invalid, Coordinate uncertainty meters invalid, Coordinate precision/uncertainty mismatch, Footprint SRS invalid, Footprint WKT mismatch, Footprint WKT invalid, Country coordinate mismatch, Country invalid, Country derived from coordinates, Continent coordinate mismatch, Continent country mismatch, Continent invalid, Continent derived from country, Continent derived from coordinates, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Recorded date mismatch, Recorded date invalid, Recorded date unlikely, Taxon match fuzzy, Taxon match higher rank, Taxon match aggregate, The scientific name ID was not used in backbone matching, The taxon concept ID was not used in backbone matching, The taxon ID was not used in backbone matching, The scientific name ID was not found in the checklist, The taxon concept ID was not found in the checklist, The taxon ID was not found in the checklist, The scientific name differs on the record from that found in the checklist, Taxon match none, The backbone match found using the taxon IDs differs from what would be found if using the scientific names, Depth not metric, Depth unlikely, Depth min max swapped, Depth non numeric, Elevation unlikely, Elevation min max swapped, Elevation not metric, Elevation non numeric, Modified date invalid, Modified date unlikely, Identified date unlikely, Identified date invalid, Basis of record invalid, Type status invalid, Multimedia date invalid, Multimedia URI invalid, References URI invalid, Error during interpretation, Individual count invalid, Individual count conflicts with occurrence status, Occurrence status unparsable, ccurrence status inferred from basis of record, Georeferenced date unlikely, Georeferenced date invalid, Ambiguous institution, Ambiguous collection, Institution match none, Possibly on loan, Different owner institution)",
 "TaxonKey is Falco deiroleucus Temminck, 1825"
 ]
}

 The dataset includes 316 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000750-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15278395
title: sha256 hashes for documents proving status of current and prior NSF grants as of 2025-04-24 8:37 PM ET
DOI: 10.5281/zenodo.15278396
title: sha256 hashes for documents proving status of current and prior NSF grants as of 2025-04-24 8:37 PM ET
DOI: 10.15468/dl.2ecpvr
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cacicus koepckeae Lowery & O'Neill, 1965"
 ]
}

 The dataset includes 28 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000751-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/1ne-jj5-ck8
title: Homologenus levii Guinot & Richer de Forges 1995

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/cwq-qbh-j2q
title: Bagatus stylodactylus Nobili 1906

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/2yj-5yk-awf
title: Cambarellus montezumae subsp. lermensis Villalobos 1953

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.
DOI: 10.3535/e9w-18m-dqr
title: Homolochunia gadaletae Guinot & Richer de Forges 1995

description: Digital Specimen for the physical specimen hosted at Senckenberg Research Institute and Natural History Museum Frankfurt/M.