cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.a7xxer
title: Occurrence Download

description: A dataset containing 13348 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salix reticulata L."
 ]
}

 The dataset includes 13348 records from 153 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024469-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a77st3
title: Occurrence Download

description: A dataset containing 3536 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Macroptilium gibbosifolium (Ortega) A.Delgado"
 ]
}

 The dataset includes 3536 records from 147 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021404-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.42j3ch
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Lonchophylla orcesi Albuja & Gardner, 2005"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074045-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5orhmk
title: Occurrence Download

description: A dataset containing 1396 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psorothamnus arborescens (Torr. ex A.Gray) Barneby"
 ]
}

 The dataset includes 1396 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024471-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kv2qs6
title: Occurrence Download

description: A dataset containing 49391 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "Continent is Africa",
 "Country is Kenya",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 49391 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015634-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xuh93n
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Helichrysum onivense Humbert"
 ]
}

 The dataset includes 98 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015566-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vw9h56
title: Occurrence Download

description: A dataset listing the 11975 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Türkiye",
 "Geometry POLYGON((26.43932 35.98808,35.14943 35.98808,43.84756 35.98808,43.84756 41.66895,36.03637 41.66895,26.43932 41.66895,26.43932 35.98808))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Animalia",
 "Year 1961-2023"
 ]
}

 The dataset's 11975 records were derived from 464 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022083-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.etutix
title: Occurrence Download

description: A dataset containing 34460 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salix viminalis L."
 ]
}

 The dataset includes 34460 records from 280 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024471-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xvbpfa
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Seba subantarctica Schellenberg, 1931",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 28 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074060-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sg5c2r
title: Occurrence Download

description: A dataset containing 102221 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tetrastes bonasia (Linnaeus, 1758)",
 "Year 2000-2023"
 ]
}

 The dataset includes 102221 records from 185 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020624-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1y8oly
title: Occurrence Download

description: A dataset containing 462 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psorothamnus polydenius (Torr.) Rydb."
 ]
}

 The dataset includes 462 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024473-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8bacfs
title: Occurrence Download

description: A dataset containing 319 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lupinus polycarpus Greene",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 319 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015576-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dad4b7
title: Occurrence Download

description: A dataset containing 402364 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Euphausiacea",
 "Year 1901-2023"
 ]
}

 The dataset includes 402364 records from 327 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017525-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.srfb64
title: Occurrence Download

description: A dataset containing 860 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vertebrata thuyoides (Harvey) Kuntze, 1891"
 ]
}

 The dataset includes 860 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063469-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25934/pr00007753.1
title: Available IPD datapackage for study 'Randomized, Double-blind, Placebo-controlled Phase 3 Study of Ibrutinib, a Bruton's Tyrosine Kinase (BTK) Inhibitor, in Combination With Bendamustine and Rituximab (BR) in Subjects With Relapsed or Refractory Chronic Lymphocytic Leukemia/Small Lymphocytic Lymphoma'

description: The purpose of this study is to examine the safety and efficacy of Ibrutinib administered in combination with bendamustine and rituximab in patients with relapsed or refractory chronic lymphocytic leukemia (CLL) or small lymphocytic lymphoma (SLL).
DOI: 10.15468/dl.38u5g8
title: Occurrence Download

description: A dataset containing 1162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pimenta dioica (L.) Merr.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1162 records from 121 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063472-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14626585
title: Artifact: Fixed Point Certificates for Reachability and Expected Rewards in MDPs

description: This artifact allows to review and reproduce the Isabelle proofs and practical experiments from the paper *Fixed Point Certificates for Reachability and Expected Rewards in MDPs*.The contents are two-fold:First, the artifact contains a formally verified certificate checker for the certificates presented in the paper.The formal Isabelle/HOL proofs of the background theory can be inspected, checked by Isabelle and the code extraction can be retraced.Second, the artifact contains a modified version of the model checking tool `Storm` with support for certificate generation. Together with the provided scripts and benchmark files, this allows to reproduce the experiments from the paper.An appropriate subset of the experiments is given to allow a review in a timely manner. In addition, original logfiles from our experiments are provided, allowing a detailed inspection.The package includes convenient installation scripts for [the TACAS 2023 VM](https://doi.org/10.5281/zenodo.7113223) (based on Ubuntu 22.04).A native installation on Linux or macOS systems (including the newer ARM-based machines) is also possible.
DOI: 10.5281/zenodo.14626586
title: Artifact: Fixed Point Certificates for Reachability and Expected Rewards in MDPs

description: This artifact allows to review and reproduce the Isabelle proofs and practical experiments from the paper *Fixed Point Certificates for Reachability and Expected Rewards in MDPs*.The contents are two-fold:First, the artifact contains a formally verified certificate checker for the certificates presented in the paper.The formal Isabelle/HOL proofs of the background theory can be inspected, checked by Isabelle and the code extraction can be retraced.Second, the artifact contains a modified version of the model checking tool `Storm` with support for certificate generation. Together with the provided scripts and benchmark files, this allows to reproduce the experiments from the paper.An appropriate subset of the experiments is given to allow a review in a timely manner. In addition, original logfiles from our experiments are provided, allowing a detailed inspection.The package includes convenient installation scripts for [the TACAS 2023 VM](https://doi.org/10.5281/zenodo.7113223) (based on Ubuntu 22.04).A native installation on Linux or macOS systems (including the newer ARM-based machines) is also possible.
DOI: 10.1285/i27241688n2
title: Multimodal Promotional Strategies in Place and Cultural Heritage Branding. Case studies and best practices
DOI: 10.15468/dl.6zggmh
title: Occurrence Download

description: A dataset containing 6255 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Champia parvula (C.Agardh) Harv."
 ]
}

 The dataset includes 6255 records from 197 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063473-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14626716
title: Bern3D-LPX data for carbon pulse emission simulations

description: see 0_README.txt
DOI: 10.5281/zenodo.14626717
title: Bern3D-LPX data for carbon pulse emission simulations

description: see 0_README.txt
DOI: 10.1285/i27241688n2p1
title: Frontespizio e pagine iniziali
DOI: 10.5281/zenodo.10462982
title: gsets

description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.5281/zenodo.10462983
title: gsets

description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.5281/zenodo.10462420
title: gbayes

description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.5281/zenodo.10462421
title: gbayes

description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.5281/zenodo.10462404
title: 1000G

description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.5281/zenodo.10462403
title: 1000G

description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.15468/dl.4rvxwr
title: Occurrence Download

description: A dataset containing 541 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pimenta racemosa (Mill.) J.W.Moore",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 541 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063474-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14238575
title: Annotation hsa.0.0.1

description: Annotation sets for gact db hsa.0.0.1. These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.5281/zenodo.10462484
title: gsea

description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.5281/zenodo.13220569
title: Single Cell RNA Transcriptomics of Mantle Cell Lymphoma Reveals the Presence of Treatment-Resistant Subclones at the Time of Diagnosis - Supplementary Data Tables

description: Supplementary Table 4. Results of optical genomic mapping for patient P009. The table lists genomic aberrations shared for diagnosis and relapse and those exclusive at both timepoints.

Supplementary Table 5. Lists of differentially expressed genes in DGs subclones compared to DGex for each patient. A result of pseudobulk analysis with DECENT R package.

Supplementary Table 6. Gene set analysis results of differentially expressed genes in DGs subclones compared to DGex using Reactome pathways.

Supplementary Table 7. Copy number variant segments predicted using whole exome sequencing data. Results of copy segments analysis and copy number calling using CNVkit.

Supplementary Table 8. Short nucleotide variants detected in whole exome sequencing data of P069 at diagnosis in PBMC and at relapse in bone marrow and intestine samples. Results of Mutect2 variant calling algorithm.
DOI: 10.5281/zenodo.13911711
title: Single Cell RNA Transcriptomics of Mantle Cell Lymphoma Reveals the Presence of Treatment-Resistant Subclones at the Time of Diagnosis - Supplementary Data Tables

description: Supplementary Table 4. Results of optical genomic mapping for patient P009. The table lists genomic aberrations shared for diagnosis and relapse and those exclusive at both timepoints.

Supplementary Table 6. Lists of gene markers for DGs subclones compared to DGex for each patient. An output of scoreMarkers ranked by mean AUC and filtered by mean AUC above 0.5.

Supplementary Table 7. Reactome pathways gene set analysis of gene markers (ranked by mean AUC) of DGs subclones compared to DGex. First sheet shows intersecting pathways for all four patients with aggressive MCL.

Supplementary Table 8. Copy number variant segments predicted using whole exome sequencing data. Results of copy segments analysis and copy number calling using CNVkit (version 0.9.1).

Supplementary Table 9. Short nucleotide variants detected in whole exome sequencing data of P069 at diagnosis in PBMC and at relapse in bone marrow and intestine samples. Results of Mutect2 variant calling algorithm (GATK version 4.5.0.0).
DOI: 10.5281/zenodo.14234857
title: Annotation hsa.0.0.1

description: Annotation sets for gact db hsa.0.0.1. These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.5281/zenodo.14235462
title: gsea

description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.5281/zenodo.14626636
title: Single Cell RNA Transcriptomics of Mantle Cell Lymphoma Reveals the Presence of Treatment-Resistant Subclones at the Time of Diagnosis - Supplementary Data Tables

description: Supplementary Table 4. Results of optical genomic mapping for patient P009. The table lists genomic aberrations shared for diagnosis and relapse and those exclusive at both timepoints.

Supplementary Table 6. Lists of gene markers for DGs subclones compared to DGex for each patient. An output of scoreMarkers ranked by mean AUC and filtered by mean AUC above 0.5.

Supplementary Table 7. Reactome pathways gene set analysis of gene markers (ranked by mean AUC) of DGs subclones compared to DGex. First sheet shows intersecting pathways for all four patients with aggressive MCL.

Supplementary Table 8. Copy number variant segments predicted using whole exome sequencing data. Results of copy segments analysis and copy number calling using CNVkit (version 0.9.1).

Supplementary Table 9. Short nucleotide variants detected in whole exome sequencing data of P069 at diagnosis in PBMC and at relapse in bone marrow and intestine samples. Results of Mutect2 variant calling algorithm (GATK version 4.5.0.0).

SCEs.tar.gz - an archive which contains two Single Cell Experiment objects: sce.total.rds which contains all cell types with their annotations and sce.MCL.rds which contains the tumor cells with their inferred CNVs.
DOI: 10.17037/data.00004491
title: Data for: "An assessment of interobserver agreement on lesion size, morphology and clinical phenotype in cutaneous leishmaniasis caused by Leishmania aethiopica in Ethiopia"

description: Data, codebook and Case Report Form (CRF) produced as part of a study to assess inter-observer reliability of the assessment of patients with cutaneous leishmaniasis. It contains variables on lesion size, lesion location, morphology features, Cutaneous Leishmaniasis type, and CL severity.
DOI: 10.5281/zenodo.14141438
title: EUR-1000G

description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.5281/zenodo.14141439
title: EUR-1000G
DOI: 10.5281/zenodo.14142263
title: EUR-1000G

description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.5281/zenodo.14141885
title: AMR-1000G

description: These data are prepared in the BALDER project funded by the ODIN platform. ODIN is sponsored by the Novo Nordisk Foundation (grant number NNF20SA0061466)
DOI: 10.5281/zenodo.14626797
title: Global monthly distributions of atmospheric CO2 concentrations under the historical and future scenarios

description: Increases in atmospheric carbon dioxide (CO2) concentrations is the main driver of global warming. Satellite observations provide continuous global CO2 retrieval products, that reveal the nonuniform distributions of atmospheric CO2 concentrations. However, climate simulation studies are almost based on a globally uniform mean or latitudinally resolved CO2 concentrations assumption. In this study, we reconstructed the historical global monthly distributions of atmospheric CO2 concentrations with 1º resolution from 1850 to 2013. We followed the historical monthly and latitudinally resolved CO2 concentrations accounting longitudinal features retrieved from fossil-fuel CO2 emissions from Carbon Dioxide Information Analysis Center. And the spatial distributions of nonuniform CO2 under Shared Socio-economic Pathways and Representative Concentration Pathways scenarios were generated based on the spatial, seasonal and interannual scales of the current CO2 concentrations from 2015 to 2150. Including the heterogenous CO2 distributions could enhance the realism of global climate modeling, to better anticipate the potential socio-economic implications, adaptation practices, and mitigation of climate change.
description: The data records include 1 file Network Common Data Form (NetCDF) format for CO2 distributions in historical period named CO2_1deg_month_1850-2013.nc, and 8 files NetCDF format with the naming convention CO2_SSP{XYY}_2015_2150.nc, where X and YY are the shared socioeconomic pathway and radiative forcing level at 2100, respectively, for CO2 distributions in the future scenarios. Each NetCDF file includes 3 dimensions: time (month of the year expressed as days since the first day of 1850, n = 1968 and 1632 for the historical and the future, respectively); latitude (Degrees North of the equator [cell centres], n = 180); longitude (Degrees East of the Prime Meridian [cell centres], n = 360). Each NetCDF file contains a monthly variable representing mole fraction of carbon dioxide in air (variable name: value in the historical file and CO2 in the future scenario files) with the unit ppm and the 1º × 1º resolution.