cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh028484.07fu
title: SH028484.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh028485.07fu
title: SH028485.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh028486.07fu
title: SH028486.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh028487.07fu
title: SH028487.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh028488.07fu
title: SH028488.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh028489.07fu
title: SH028489.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh028490.07fu
title: SH028490.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh028491.07fu
title: SH028491.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh028492.07fu
title: SH028492.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.6891707.v1
title: Additional file 8: of Naked mole-rat transcriptome signatures of socially suppressed sexual maturation and links of reproduction to aging

description: Gene annotation track for naked mole-rat. (GFF 18958 kb)
DOI: 10.6084/m9.figshare.6891698
title: Additional file 7: of Naked mole-rat transcriptome signatures of socially suppressed sexual maturation and links of reproduction to aging

description: Gene annotation track for guinea pig. (GFF 19536 kb)
DOI: 10.7910/dvn/debtui/twbqxo
title: 0V

description: sigma=0volts
DOI: 10.7910/dvn/debtui/ki4xwo
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891695
title: Additional file 5: of Species comparison of liver proteomes reveals links to naked mole-rat longevity and human aging

description: Table S4. Excel workbook (.xlsx), NMR aging dataset, contains differential expression analysis for proteomic and transcriptomic data and integrated RNAseq proteome analysis of old vs. young NMR livers, and proteomic analysis of middle-aged vs. young NMR livers. (XLS 6040 kb)
DOI: 10.6084/m9.figshare.6891695.v1
title: Additional file 5: of Species comparison of liver proteomes reveals links to naked mole-rat longevity and human aging

description: Table S4. Excel workbook (.xlsx), NMR aging dataset, contains differential expression analysis for proteomic and transcriptomic data and integrated RNAseq proteome analysis of old vs. young NMR livers, and proteomic analysis of middle-aged vs. young NMR livers. (XLS 6040 kb)
DOI: 10.7910/dvn/debtui/dxatzs
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891686
title: Additional file 4: of Species comparison of liver proteomes reveals links to naked mole-rat longevity and human aging

description: Table S3. Excel workbook (.xlsx), NMR vs. GP gene set enrichment, contains significantly affected gene sets from the proteomic analysis. (XLSX 65 kb)
DOI: 10.6084/m9.figshare.6891686.v1
title: Additional file 4: of Species comparison of liver proteomes reveals links to naked mole-rat longevity and human aging

description: Table S3. Excel workbook (.xlsx), NMR vs. GP gene set enrichment, contains significantly affected gene sets from the proteomic analysis. (XLSX 65 kb)
DOI: 10.7910/dvn/debtui/yzbyoq
title: 0V

description: sigma=0volts
DOI: 10.7910/dvn/debtui/vprfjp
title: 0V

description: sigma=0volts
DOI: 10.7910/dvn/debtui/2af3ih
title: 0V

description: sigma=0volts
DOI: 10.7910/dvn/debtui/5xlgri
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891674
title: Additional file 5: of Naked mole-rat transcriptome signatures of socially suppressed sexual maturation and links of reproduction to aging

description: Supplementary Data S12-S47 containing test results for differential expression between female vs. male in each species, group, and tissue (DESeq2). (XLSX 28655 kb)
DOI: 10.7910/dvn/debtui/rb4yjo
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891671
title: Additional file 2: of Species comparison of liver proteomes reveals links to naked mole-rat longevity and human aging

description: Table S2. NMR vs. GP dataset, contains differential expression analysis for proteomic and transcriptomic data and integrated RNAseq proteome analysis of NMR and GP livers. (XLS 4142 kb)
DOI: 10.6084/m9.figshare.6891671.v1
title: Additional file 2: of Species comparison of liver proteomes reveals links to naked mole-rat longevity and human aging

description: Table S2. NMR vs. GP dataset, contains differential expression analysis for proteomic and transcriptomic data and integrated RNAseq proteome analysis of NMR and GP livers. (XLS 4142 kb)
DOI: 10.6084/m9.figshare.6891674.v1
title: Additional file 5: of Naked mole-rat transcriptome signatures of socially suppressed sexual maturation and links of reproduction to aging

description: Supplementary Data S12-S47 containing test results for differential expression between female vs. male in each species, group, and tissue (DESeq2). (XLSX 28655 kb)
DOI: 10.7910/dvn/debtui/ldj8yk
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891665
title: Additional file 1: of Species comparison of liver proteomes reveals links to naked mole-rat longevity and human aging

description: Table S1. List of used animals. (XLSX 36 kb)
DOI: 10.7910/dvn/debtui/p3vewd
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891665.v1
title: Additional file 1: of Species comparison of liver proteomes reveals links to naked mole-rat longevity and human aging

description: Table S1. List of used animals. (XLSX 36 kb)
DOI: 10.6084/m9.figshare.6891662
title: Additional file 4: of Naked mole-rat transcriptome signatures of socially suppressed sexual maturation and links of reproduction to aging

description: Supplementary Data S1-S11 containing test results for differential expression between NMR vs. GP. (XLSX 5404 kb)
DOI: 10.7910/dvn/debtui/2n22mp
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891662.v1
title: Additional file 4: of Naked mole-rat transcriptome signatures of socially suppressed sexual maturation and links of reproduction to aging

description: Supplementary Data S1-S11 containing test results for differential expression between NMR vs. GP. (XLSX 5404 kb)
DOI: 10.7910/dvn/debtui/ghrv98
title: 0V

description: sigma=0volts
DOI: 10.7910/dvn/debtui/tdzhzt
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891653
title: Additional file 3: of Naked mole-rat transcriptome signatures of socially suppressed sexual maturation and links of reproduction to aging

description: Text S1. Detailed description of expression changes in genes involved in steroidogenesis. Text S2. Detailed description of expression changes in gonadotropin-related genes (PDF 296 kb)
DOI: 10.7910/dvn/debtui/kh3ehq
title: 0V

description: sigma=0volts; This is a FITS file with 1 (primary) HDU. The following recognized metadata keys have been found in the FITS file: NAXIS2; NAXIS; NAXIS1; NAXIS0;
DOI: 10.6084/m9.figshare.6891653.v1
title: Additional file 3: of Naked mole-rat transcriptome signatures of socially suppressed sexual maturation and links of reproduction to aging

description: Text S1. Detailed description of expression changes in genes involved in steroidogenesis. Text S2. Detailed description of expression changes in gonadotropin-related genes (PDF 296 kb)
DOI: 10.6084/m9.figshare.6891647
title: Additional file 2: of Naked mole-rat transcriptome signatures of socially suppressed sexual maturation and links of reproduction to aging

description: Table S1. Age at death for NMRs and GPs. Table S2. Number of analyzed biological replicates per group. Table S3. Reason for exclusion of samples from further analysis. Table S4. Number of uniquely aligned RNA-seq reads. Table S5. Mean pairwise Pearson correlation coefficients between biological replicates in (A) naked mole-rat and (B) guinea pig. Table S22. Proportion of mitochondrial transcriptonal output. Table S25. Enrichment of age-related genes (Digital Ageing Atlas) in status-related DEGs. Only tissues having at least 50 DEGs were tested for enrichment. Table S27. Fisher’s exact test for overlap between DAA and upper quintile of status-related expression differences. Table S10, S12, S15–17, S19–21, S28, S29. Functional gene set enrichments analyses—see Overview tab for detailed description. Table S7–9, S11, S13, S14, S18, S23, S24, S26. Differentially expressed genes—see Overview tab for detailed description. (XLSX 313 kb)
DOI: 10.6084/m9.figshare.6891647.v1
title: Additional file 2: of Naked mole-rat transcriptome signatures of socially suppressed sexual maturation and links of reproduction to aging

description: Table S1. Age at death for NMRs and GPs. Table S2. Number of analyzed biological replicates per group. Table S3. Reason for exclusion of samples from further analysis. Table S4. Number of uniquely aligned RNA-seq reads. Table S5. Mean pairwise Pearson correlation coefficients between biological replicates in (A) naked mole-rat and (B) guinea pig. Table S22. Proportion of mitochondrial transcriptonal output. Table S25. Enrichment of age-related genes (Digital Ageing Atlas) in status-related DEGs. Only tissues having at least 50 DEGs were tested for enrichment. Table S27. Fisher’s exact test for overlap between DAA and upper quintile of status-related expression differences. Table S10, S12, S15–17, S19–21, S28, S29. Functional gene set enrichments analyses—see Overview tab for detailed description. Table S7–9, S11, S13, S14, S18, S23, S24, S26. Differentially expressed genes—see Overview tab for detailed description. (XLSX 313 kb)
DOI: 10.7910/dvn/debtui/xipnwc
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description: sigma=0volts
DOI: 10.7910/dvn/debtui/gmdyos
title: 0V

description: sigma=0volts
DOI: 10.7910/dvn/debtui/f5ysab
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DOI: 10.7910/dvn/debtui/eyzrb3
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description: sigma=0volts
DOI: 10.7910/dvn/debtui/giu1q3
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DOI: 10.7910/dvn/debtui/lfyirp
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DOI: 10.7910/dvn/debtui/90zmpv
title: 0V

description: sigma=0volts; This is a FITS file with 1 (primary) HDU. The following recognized metadata keys have been found in the FITS file: NAXIS2; NAXIS; NAXIS1; NAXIS0;
DOI: 10.7910/dvn/debtui/2bqbvb
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891614
title: Additional file 1: of Phylogenetic analysis of the wild-type strains of canine distemper virus circulating in the United States

description: CDV primer sequences. (XLS 120 kb)
DOI: 10.6084/m9.figshare.6891611
title: Additional file 2: of The effect of human resource management on performance in hospitals in Sub-Saharan Africa: a systematic literature review

description: Number of studies that link a specific HRM practice to a specific outcome. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.6891614.v1
title: Additional file 1: of Phylogenetic analysis of the wild-type strains of canine distemper virus circulating in the United States

description: CDV primer sequences. (XLS 120 kb)
DOI: 10.7910/dvn/debtui/zrllbj
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891611.v1
title: Additional file 2: of The effect of human resource management on performance in hospitals in Sub-Saharan Africa: a systematic literature review

description: Number of studies that link a specific HRM practice to a specific outcome. (XLSX 11 kb)
DOI: 10.7910/dvn/debtui/i59qyp
title: 0V

description: sigma=0volts; This is a FITS file with 1 (primary) HDU. The following recognized metadata keys have been found in the FITS file: NAXIS2; NAXIS; NAXIS1; NAXIS0;
DOI: 10.7910/dvn/debtui/lncnny
title: 0V

description: sigma=0volts
DOI: 10.7910/dvn/debtui/xjt4us
title: 0V

description: sigma=0volts; This is a FITS file with 1 (primary) HDU. The following recognized metadata keys have been found in the FITS file: NAXIS2; NAXIS; NAXIS1; NAXIS0;
DOI: 10.7910/dvn/debtui/ptvtti
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891587
title: Additional file 1: of Dietary supplementation with olive mill wastewaters induces modifications on chicken jejunum epithelial cell transcriptome and modulates jejunum morphology

description: Table S1. Significant differentially expressed genes (DEG), up regulated (logFC&gt; 1) and down regulated (logFC
DOI: 10.7910/dvn/debtui/oearkj
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891587.v1
title: Additional file 1: of Dietary supplementation with olive mill wastewaters induces modifications on chicken jejunum epithelial cell transcriptome and modulates jejunum morphology

description: Table S1. Significant differentially expressed genes (DEG), up regulated (logFC&gt; 1) and down regulated (logFC
DOI: 10.7910/dvn/debtui/jbjspt
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description: sigma=0volts
DOI: 10.7910/dvn/debtui/u0fmdx
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DOI: 10.7910/dvn/debtui/e941pf
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DOI: 10.7910/dvn/debtui/pvlroc
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DOI: 10.7910/dvn/debtui/qvzv7z
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description: sigma=0volts; This is a FITS file with 1 (primary) HDU. The following recognized metadata keys have been found in the FITS file: NAXIS2; NAXIS; NAXIS1; NAXIS0;
DOI: 10.7910/dvn/debtui/dvj2n4
title: 0V

description: sigma=0volts; This is a FITS file with 1 (primary) HDU. The following recognized metadata keys have been found in the FITS file: NAXIS2; NAXIS; NAXIS1; NAXIS0;
DOI: 10.7910/dvn/debtui/ykauz4
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DOI: 10.7910/dvn/debtui/vdemda
title: 0V

description: sigma=0volts; This is a FITS file with 1 (primary) HDU. The following recognized metadata keys have been found in the FITS file: NAXIS2; NAXIS; NAXIS1; NAXIS0;
DOI: 10.7910/dvn/debtui/w43dms
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description: sigma=0volts
DOI: 10.7910/dvn/debtui/fnsnq5
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description: sigma=0volts; This is a FITS file with 1 (primary) HDU. The following recognized metadata keys have been found in the FITS file: NAXIS2; NAXIS; NAXIS1; NAXIS0;
DOI: 10.7910/dvn/debtui/nw9lah
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891545
title: Additional file 1: of Transcriptional profiling of HERV-K(HML-2) in amyotrophic lateral sclerosis and potential implications for expression of HML-2 proteins

description: Table S1. Tissue samples used in this study. Table S2. Relative cloning frequencies of gag amplicon-derived cDNAs from different HERV-K(HML-2) loci. (XLSX 29 kb)
DOI: 10.7910/dvn/debtui/qqnnfc
title: 0V

description: sigma=0volts
DOI: 10.6084/m9.figshare.6891545.v1
title: Additional file 1: of Transcriptional profiling of HERV-K(HML-2) in amyotrophic lateral sclerosis and potential implications for expression of HML-2 proteins

description: Table S1. Tissue samples used in this study. Table S2. Relative cloning frequencies of gag amplicon-derived cDNAs from different HERV-K(HML-2) loci. (XLSX 29 kb)
DOI: 10.7910/dvn/debtui/d2zb13
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