cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12086697.v1
title: ExperimentalDesign

description: Mapping file with information of the experimental design by sample. This file doesn't include samples not used in for statistical analyses, such as PCR negative and positive controls, mock communities and first sequencing attempt of samples with low reads yield.
DOI: 10.21954/ou.rd.12086658
title: An exploration of wedding celebrancy in England and Wales

description: This online survey explored various aspects of the work of currently practising 'wedding celebrants' in England and Wales. Wedding celebrants conduct wedding-style ceremonies that celebrate couples' relationships. The ceremonies have no legal effect. Despite anecdotal evidence about the growing popularity of celebrant-led ceremonies, there had previously been no independent research into celebrants' work.<br>A link to the survey was forwarded to all the celebrants on the mailing lists of the seven member organisations of the Wedding Celebrancy Commission. <br>The easiest way to give information to participants in Qualtrics is to create a 'question' containing the information. Q1 gave information about the terminology used in the survey, and Q2 asked all respondents to answer Q3. Q3 was 'Did you conduct any wedding celebration ceremonies in England and/or Wales during 2091?'. If celebrants answered 'no', they were taken to the end of the survey, because they were non-eligible. Q4 was the 'thank you and goodbye' message for ineligible celebrants. 515 responses were received, and the responses of the 228 non-eligible respondents were deleted.<br>This spreadsheet contains anonymised raw data from the 287 eligible respondents. <br>The data from Qualtrics were exported to Excel for ease of manipulation. No identifying data were included in the Qualtrics reports.<br>References are forthcoming: the data are expected to be used in two articles: [2020] <i>Child and Family Law Quarterly</i> Vol 2 and Vol 3.
DOI: 10.21954/ou.rd.12086658.v1
title: An exploration of wedding celebrancy in England and Wales

description: This online survey explored various aspects of the work of currently practising 'wedding celebrants' in England and Wales. Wedding celebrants conduct wedding-style ceremonies that celebrate couples' relationships. The ceremonies have no legal effect. Despite anecdotal evidence about the growing popularity of celebrant-led ceremonies, there had previously been no independent research into celebrants' work.<br>A link to the survey was forwarded to all the celebrants on the mailing lists of the seven member organisations of the Wedding Celebrancy Commission. <br>The easiest way to give information to participants in Qualtrics is to create a 'question' containing the information. Q1 gave information about the terminology used in the survey, and Q2 asked all respondents to answer Q3. Q3 was 'Did you conduct any wedding celebration ceremonies in England and/or Wales during 2091?'. If celebrants answered 'no', they were taken to the end of the survey, because they were non-eligible. Q4 was the 'thank you and goodbye' message for ineligible celebrants. 515 responses were received, and the responses of the 228 non-eligible respondents were deleted.<br>This spreadsheet contains anonymised raw data from the 287 eligible respondents. <br>The data from Qualtrics were exported to Excel for ease of manipulation. No identifying data were included in the Qualtrics reports.<br>References are forthcoming: the data are expected to be used in two articles: [2020] <i>Child and Family Law Quarterly</i> Vol 2 and Vol 3.
DOI: 10.6084/m9.figshare.12086580
title: Regression Data - The Determinant of Spatial Terrorism.xlsx

description: This is the data I use for the time-series regression in my paper, The Determinant of Spatial Terrorism. The spatial terrorism (ST) is the number of terrorist attacks around the globe measured by Moran’s <i>I</i> global spatial autocorrelation. I obtain the number of terrorist attacks from the Global Terrorism Database (GTD) and other variables from the World Bank World Development Indicator (WB-WDI). Any error is mine.
DOI: 10.6084/m9.figshare.12086568
title: [AVI 2020] UTA4: Datasets

description: Several <em>datasets</em> are fostering innovation in higher-level functions for everyone, everywhere. By providing this repository, we hope to encourage the research community to focus on hard problems. In this project, we present <em>usability</em> (SUS), <em>workload</em> (NASA-TLX), <em>time</em> and <em>rates</em> (BIRADS) results of clinicians from our User Tests and Analysis 4 (UTA4) study. We also provide the <em>medical imaging DICOM files</em>. That said, we created UTA4: SUS Dataset, UTA4: NASA-TLX Dataset, UTA4: Time Dataset, UTA4: Rates Dataset and UTA4: Medical Imaging DICOM Files Dataset pages to provide further information regarding these <em>datasets</em> and respective repositories. Please follow this last information. The present data is a mirror of the <code>uta4-sm-vs-mm-sheets-nameless</code> repository. Work and results are published on a top Human-Computer Interaction (HCI) conference named AVI 2020 (page).
DOI: 10.6084/m9.figshare.12086556
title: Data for: Licking and agonistic interactions in grazing dairy cows as indicators of preferential companies

description: Original data, R scripts and output of data analysis for the original research article: Licking and agonistic interactions in grazing dairy cows as indicators of preferential companies.<br>To follow step by step the statistical analysis, please refer to the PDF file. Original datasets are posted as .Rdata and as .csv. The R script used to generate the PDF file is also available.<br>Happy coding!<br>For further info please contact: pinheiro.machado@ufsc.br (Luiz Carlos Pinheiro Machado Filho)<br> <br>
DOI: 10.6084/m9.figshare.12086475
title: Profile HMMs

description: Profile HMMs for the 386 putative MGEs identified in this study<br>
DOI: 10.6084/m9.figshare.12086463
title: Multi-fasta file including the 66 putative ICE sequences

description: Multi-fasta file including the 66 putative ICE sequences
DOI: 10.6084/m9.figshare.12086568.v1
title: Single-Modality vs Multi-Modality

description: Several <em>datasets</em> are fostering innovation in higher-level functions for everyone, everywhere. By providing this repository, we hope to encourage the research community to focus on hard problems. In this project, we present <em>usability</em> (SUS), <em>workload</em> (NASA-TLX), <em>time</em> and <em>rates</em> (BIRADS) results of clinicians from our User Tests and Analysis 4 (UTA4) study. We also provide the <em>medical imaging DICOM files</em>. That said, we created UTA4: SUS Dataset, UTA4: NASA-TLX Dataset, UTA4: Time Dataset, UTA4: Rates Dataset and UTA4: Medical Imaging DICOM Files Dataset pages to provide further information regarding these <em>datasets</em> and respective repositories. Please follow this last information. The present data is a mirror of the <code>uta4-sm-vs-mm-sheets-nameless</code> repository. Work and results are published on a top Human-Computer Interaction (HCI) conference named AVI 2020 (page).
DOI: 10.6084/m9.figshare.12086475.v1
title: Profile HMMs

description: Profile HMMs for the 386 putative MGEs identified in this study<br>
DOI: 10.6084/m9.figshare.12086463.v1
title: Multi-fasta file including the 66 putative ICE sequences

description: Multi-fasta file including the 66 putative ICE sequences
DOI: 10.6084/m9.figshare.12086184
title: input_files

description: Code availability<br>The Vienna Ab Initio Simulation Package (VASP) is a proprietary software available for purchase at https://www.vasp.at/.<br>Data availabilityThe simulation input files (INCAR POSCAR KPOINTS) are described in computational methods and shored in Simulation_input_files.tar.gz.
DOI: 10.6084/m9.figshare.12086184.v1
title: input_files

description: Code availability<br>The Vienna Ab Initio Simulation Package (VASP) is a proprietary software available for purchase at https://www.vasp.at/.<br>Data availabilityThe simulation input files (INCAR POSCAR KPOINTS) are described in computational methods and shored in Simulation_input_files.tar.gz.
DOI: 10.6084/m9.figshare.12086172
title: Supplementary Material for: Polymorphisms in Glycolysis-Related Genes Are Associated with Clinical Outcomes of Paclitaxel-Cisplatin Chemotherapy in Non-Small Cell Lung Cancer

description: <b><i>Objective:</i></b> This study was conducted to investigate whether polymorphisms in glycolysis-related genes are associated with clinical outcomes of patients with advanced-stage non-small cell lung cancer (NSCLC) undergoing chemotherapy. <b><i>Methods:</i></b> A total of 377 patients with NSCLC were enrolled. Sixty-five single-nucleotide polymorphisms in 26 genes involved in the glycolytic pathway were evaluated. The associations of the variants with the chemotherapy response and overall survival (OS) were analyzed. <b><i>Results:</i></b> Among the 65 variants investigated, <i>PFKL</i> rs2073436C&gt;G and <i>GPI</i> rs7248411C&gt;G significantly correlated with clinical outcomes after chemotherapy in multivariate analyses. <i>PFKL</i> rs2073436C&gt;G was significantly associated with both a worse response to chemotherapy (adjusted odds ratio [aOR] = 0.64, 95% CI = 0.45–0.90, <i>p</i> = 0.01) and a worse OS (adjusted hazard ratio [aHR] = 1.35, 95% CI = 1.14–1.61, <i>p</i> = 0.001). <i>GPI</i> rs7248411C&gt;G was significantly associated with both a better chemotherapy response (aOR = 1.58, 95% CI = 1.07–2.23, <i>p</i> = 0.02) and a better OS (aHR = 0.80, 95% CI = 0.66–0.98, <i>p</i> = 0.03). When stratified by tumor histology, <i>PFKL</i> rs2073436C&gt;G was significantly associated with OS only in squamous cell carcinoma, whereas <i>GPI</i> rs7248411C&gt;G exhibited a significant association with the chemotherapy response and OS only in adenocarcinoma. <b><i>Conclusion:</i></b> This result suggests that the <i>PFKL</i> rs2073436C&gt;G and <i>GPI</i> rs7248411C&gt;G are useful for predicting the clinical outcome of first-line paclitaxel-cisplatin chemotherapy in NSCLC.
DOI: 10.6084/m9.figshare.12086103
title: Platelet functional diversity flow cytometry data

description: This is the raw cytometry data as .csv files that compare the behaviour of platelet collectives to single platelets (encapsulated in droplets) following stimulation with convulxin, TRAP-14 and ADP. The file names relate to each of the figures (article and supplementary) of the publication.
DOI: 10.6084/m9.figshare.12085878
title: 123456789

description: the data good
DOI: 10.6084/m9.figshare.12085869
title: IEWS test systems.docx

description: This file contains the configuration and data of integrated electricity-water (IEWS) systems for our research.
DOI: 10.6084/m9.figshare.12085878.v1
title: 1234

description: the data good
DOI: 10.6084/m9.figshare.12085821
title: Results from a Replicated Experiment on the Affective Reactions of Novice Developers when Applying Test-Driven Development: Raw Data

description: Contains the raw data of the replicated experiment by Romano et al. [1]. <br>Reference:[1] S. Romano, D. Fucci, M. T. Baldassarre, D. Caivano and G. Scanniello, <i>"Results from a Replicated Experiment on the Affective Reactions of Novice Developers when Applying Test-Driven Development,"</i> in proc. of International Conference on Agile Software Development (XP), 2020.
DOI: 10.6084/m9.figshare.12085869.v1
title: IEWS test systems.docx

description: This file contains the configuration and data of integrated electricity-water (IEWS) systems for our research.
DOI: 10.6084/m9.figshare.12085674
title: Supplementary Material for: Anxiety, Depression, and Suicidal Ideation amongst Patients with Facial Dermatoses (Acne, Rosacea, Perioral Dermatitis, and Folliculitis) in Lithuania

description: <b><i>Background/Objective:</i></b> Skin diseases, especially those with visible manifestation, are considered to cause a major influence on global mental health. Therefore, we determined the prevalence and severity of anxiety, depression, and suicidal ideation in a large sample of patients with facial dermatoses, namely acne, rosacea, folliculitis, and perioral dermatitis. <b><i>Methods:</i></b> The mental health of patients with facial dermatoses and respective controls was assessed using the Hospital Anxiety and Depression Scale and questions concerning suicidal ideation. <b><i>Results:</i></b> The study included 543 patients with facial dermatoses and 497 healthy individuals. Anxiety was present in 37.6% of the patients (14.9% of controls), depression in 21.7% (6.8%), and suicidal thoughts in 9.8% (3.2%) (<i>p</i> &lt; 0.001). Acne patients demonstrated the highest anxiety and depression subscale scores (mean ± standard deviation: 7.1 ± 0.25, 95% confidence interval (CI): 6.58–7.56; controls: 5 ± 0.23, 95% CI: 4.57–5.49). In rosacea 30% of the patients had depression symptoms (adjusted odds ratio (OR): 7.216, 95% CI: 4.122–12.632, <i>p</i> &lt; 0.001), while in folliculitis patients 15.4% (OR: 3.138, 95% CI: 1.241–7.936, <i>p</i> = 0.016) had suicidal thoughts. Patients with anxiety symptoms and suicidal thoughts were on average younger than those without (28.3 ± 0.76 vs. 31.2 ± 0.66 years, <i>p</i> = 0.001 and 25.3 ± 0.98 vs. 30.5 ± 0.55 years, <i>p</i> = 0.007, respectively). <b><i>Conclusion:</i></b> Acne and rosacea are associated with anxiety, depression, and suicidal ideation in Lithuanian patients. Younger patients are more prone to report such symptoms than older ones.
DOI: 10.6084/m9.figshare.12085674.v1
title: Supplementary Material for: Anxiety, Depression, and Suicidal Ideation amongst Patients with Facial Dermatoses (Acne, Rosacea, Perioral Dermatitis, and Folliculitis) in Lithuania

description: <b><i>Background/Objective:</i></b> Skin diseases, especially those with visible manifestation, are considered to cause a major influence on global mental health. Therefore, we determined the prevalence and severity of anxiety, depression, and suicidal ideation in a large sample of patients with facial dermatoses, namely acne, rosacea, folliculitis, and perioral dermatitis. <b><i>Methods:</i></b> The mental health of patients with facial dermatoses and respective controls was assessed using the Hospital Anxiety and Depression Scale and questions concerning suicidal ideation. <b><i>Results:</i></b> The study included 543 patients with facial dermatoses and 497 healthy individuals. Anxiety was present in 37.6% of the patients (14.9% of controls), depression in 21.7% (6.8%), and suicidal thoughts in 9.8% (3.2%) (<i>p</i> &lt; 0.001). Acne patients demonstrated the highest anxiety and depression subscale scores (mean ± standard deviation: 7.1 ± 0.25, 95% confidence interval (CI): 6.58–7.56; controls: 5 ± 0.23, 95% CI: 4.57–5.49). In rosacea 30% of the patients had depression symptoms (adjusted odds ratio (OR): 7.216, 95% CI: 4.122–12.632, <i>p</i> &lt; 0.001), while in folliculitis patients 15.4% (OR: 3.138, 95% CI: 1.241–7.936, <i>p</i> = 0.016) had suicidal thoughts. Patients with anxiety symptoms and suicidal thoughts were on average younger than those without (28.3 ± 0.76 vs. 31.2 ± 0.66 years, <i>p</i> = 0.001 and 25.3 ± 0.98 vs. 30.5 ± 0.55 years, <i>p</i> = 0.007, respectively). <b><i>Conclusion:</i></b> Acne and rosacea are associated with anxiety, depression, and suicidal ideation in Lithuanian patients. Younger patients are more prone to report such symptoms than older ones.
DOI: 10.6084/m9.figshare.12085623
title: A comprehensive study on identifying the structural and functional SNPs of human neuronal membrane glycoprotein M6A (GPM6A)

description: Glycoprotein M6A, a stress related gene, plays an important role in synapse and filopodia formation. Filopodia formation is vital for development, immunity, angiogenesis, wound healing and metastasis. In this study, structural and functional analysis of high-risk SNPs associated with Glycoprotein M6-A were evaluated using six different bioinformatics tools. Results classified T210I, T134I, Y153H, I215T, F156L, T160I, I226T, R247W, R178C, W159R, N157S and P151L as deleterious mutants that are crucial for the structure and function of the protein causing malfunction of M6-a and ultimately leads to disease development. The three-dimensional structure of wild-type M6-a and mutant M6-a were also predicted. Furthermore, the effects of high risk substitutions were also analyzed with interaction with valproic acid. Based on structural models obtained, the binding pocket of ligand bound glycoprotein M6-A structure showed few core interacting residues which are different in the mutant models. Among all substitutions, F156L showed complete loss of binding pocket when interacting with valproic acid as compared to the wild type model. Up to the best of our knowledge this is the first comprehensive study where GPM6A mutations were analyzed. The mechanism of action of GPM6A is still not fully defined which limits the understanding of functional details encoding M6-A. Our results may help enlighten some molecular aspects underlying glycoprotein M6-A. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.12085599
title: Lærke Wester-Larsen et al. 2020. Biogenic volatile organic compounds in Arctic soil: A field study of concentrations and variability with vegetation cover

description: Complete list of volatile organic compounds and also soil temperature, soil moisture, soil organic matter, pH, CO2 soil concentration.
DOI: 10.6084/m9.figshare.12085599.v1
title: Lærke Wester-Larsen et al. 2020. Biogenic volatile organic compounds in Arctic soil: A field study of concentrations and variability with vegetation cover

description: Complete list of volatile organic compounds and also soil temperature, soil moisture, soil organic matter, pH, CO2 soil concentration.
DOI: 10.6084/m9.figshare.12085551
title: Supplementary Material for: Increased Release of Proinflammatory Proteins in Primary Human Adipocytes and Activation of the Inflammatory NFĸB, p38, and ERK Pathways upon Omentin Treatment

description: <b><i>Objectives:</i></b> To investigate the impact of omentin on the release of inflammation-related biomarkers and inflammatory pathways in primary human adipocytes. <b><i>Methods:</i></b> Adipocytes were treated with or without omentin (500 and 2,000 ng/mL), and the supernatants were analyzed for inflammation-related biomarkers using proximity extension assay technology. Potential upstream regulators of the omentin-stimulated proteins were identified using Ingenuity Pathway Analysis. Protein levels of components of inflammatory pathways were measured using Western blotting. <b><i>Results:</i></b> 2,000 ng/mL omentin induced the release of 30 biomarkers 97.1 ± 31.1-fold in the supernatants (all <i>p</i> &lt; 0.05). Most biomarkers were proin­flammatory chemokines and cytokines. We identified the transcription factor nuclear factor “kappa-light-chain-enhancer” of activated B cells (NFĸB) and the kinases p38 and extracellular signal-regulated kinase (ERK)1/2 as potential upstream regulators in silico. On the cellular level, treatment with 2,000 ng/mL omentin for 24 h enhanced the phosphorylation levels of NFĸB 2.1 ± 0.3-fold (<i>p</i> &lt; 0.05), of p38 2.6 ± 0.4-fold (<i>p</i> &lt; 0.05), and of ERK1/2 1.8 ± 0.2-fold (<i>p</i> &lt; 0.05). <b><i>Conclusions:</i></b> These data argue that omentin exerts proinflammatory effects through the activation of the inflammatory NFĸB, p38, and ERK1/2 pathways in cultured primary adipocytes.
DOI: 10.6084/m9.figshare.12085539
title: Source Level Data from Acoustically advertising male harbour seals in southeast Alaska do not make biologically relevant acoustic adjustments in the presence of vessel noise

description: Raw data
DOI: 10.6084/m9.figshare.12085539.v1
title: Source Level Data from Acoustically advertising male harbour seals in southeast Alaska do not make biologically relevant acoustic adjustments in the presence of vessel noise

description: Raw data
DOI: 10.6084/m9.figshare.12085503
title: data_submitted_2019JD031868.zip

description: Numerical simulations and observations for 2019JD031868
DOI: 10.6084/m9.figshare.12085503.v1
title: data_submitted_2019JD031868.zip

description: Numerical simulations and observations for 2019JD031868
DOI: 10.6084/m9.figshare.12085407
title: Additional file 9 of Household presentation of acute gastroenteritis in a primary care sentinel network: retrospective database studies

description: Additional file 9: Table S1. 2011 census data and proportion.
DOI: 10.6084/m9.figshare.12085407.v1
title: Additional file 9 of Household presentation of acute gastroenteritis in a primary care sentinel network: retrospective database studies

description: Additional file 9: Table S1. 2011 census data and proportion.
DOI: 10.6084/m9.figshare.12085380
title: Additional file 18 of Household presentation of acute gastroenteritis in a primary care sentinel network: retrospective database studies

description: Additional file 18: Table S10. Acute gastroenteritis rates over 25 years, showing rates in boys and girls under five years old and males and females five years and over. Table S11. Acute gastroenteritis rates, in adults by combined WHO obesity category. Table S12. Rates of household incidence by age-band. Table S13. Rate of household incidence by socioeconomic status reported in IMD. Table S14. Household incidence of AGE by household size. Table S15. Household incidence of AGE by household type. Table S16. Household incidence of AGE by urban-rural classification.
DOI: 10.6084/m9.figshare.12085374
title: Additional file 16 of Household presentation of acute gastroenteritis in a primary care sentinel network: retrospective database studies

description: Additional file 16: Table S8. Gastroenteritis rates by age band including under 2 years old.
DOI: 10.6084/m9.figshare.12085371
title: Additional file 15 of Household presentation of acute gastroenteritis in a primary care sentinel network: retrospective database studies

description: Additional file 15: Table S7. Ethnicity.
DOI: 10.6084/m9.figshare.12085374.v1
title: Additional file 16 of Household presentation of acute gastroenteritis in a primary care sentinel network: retrospective database studies

description: Additional file 16: Table S8. Gastroenteritis rates by age band including under 2 years old.
DOI: 10.6084/m9.figshare.12085380.v1
title: Additional file 18 of Household presentation of acute gastroenteritis in a primary care sentinel network: retrospective database studies

description: Additional file 18: Table S10. Acute gastroenteritis rates over 25 years, showing rates in boys and girls under five years old and males and females five years and over. Table S11. Acute gastroenteritis rates, in adults by combined WHO obesity category. Table S12. Rates of household incidence by age-band. Table S13. Rate of household incidence by socioeconomic status reported in IMD. Table S14. Household incidence of AGE by household size. Table S15. Household incidence of AGE by household type. Table S16. Household incidence of AGE by urban-rural classification.
DOI: 10.6084/m9.figshare.12085365
title: Additional file 13 of Household presentation of acute gastroenteritis in a primary care sentinel network: retrospective database studies

description: Additional file 13: Table S5. Title: Gastroenteritis rates age and sex.
DOI: 10.6084/m9.figshare.12085368
title: Additional file 14 of Household presentation of acute gastroenteritis in a primary care sentinel network: retrospective database studies

description: Additional file 14: Table S6. Crude gastroenteritis rates by ethnicity.
DOI: 10.6084/m9.figshare.12085371.v1
title: Additional file 15 of Household presentation of acute gastroenteritis in a primary care sentinel network: retrospective database studies

description: Additional file 15: Table S7. Ethnicity.
DOI: 10.6084/m9.figshare.12085362
title: Additional file 12 of Household presentation of acute gastroenteritis in a primary care sentinel network: retrospective database studies

description: Additional file 12: Table S4. Gastroenteritis rates with confidence interval.