cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14277509.v1
title: Detection of anti-Leptospira spp. agglutinins in captive South American river turtles, Podocnemis expansa

description: ABSTRACT Leptospirosis is a zoonosis transmitted by contact with infected urine or water contaminated with the agent. Searches for Leptospira spp. in reptiles are scarce although most species have contact with aquatic environments. We evaluated the presence of anti-Leptospira spp. antibodies in Podocnemis expansa housed at the Amazonian Zoobotanical Garden, in Belém, Pará state, Brazil. We analyzed 74 serum samples through the microscopic agglutination test using 31 live antigens from different Leptospira spp. serogroups. Thirty samples (40.5%) were positive against Leptospira spp., with titrations between 100 and 3,200 for one or more serogroups. The Hebdomadis serogroup was the most prevalent, with 26 (87%) out of the 30 positive samples, followed by Djasiman, with two (7%) and Celledoni and Bataviae with one (3%) sample each. The detection of anti-Leptospira spp. agglutinins in P. expansa suggests that the aquatic environment is a transmission route for this pathogen among chelonians.
DOI: 10.6084/m9.figshare.14277510
title: Effects of inclusion of patauá, Oenocarpus bataua meal on elephant grass silage

description: ABSTRACT Elephant grass silages have high moisture content, causing nutrient loss, mainly by effluent production. The use of moisture absorbent additives, such as patauá, Oenocarpus bataua meal, can be a strategy to reduce losses in these silages. The aim of this study was to determine the fermentation losses, microbiological composition, fermentative characteristics, and chemical composition of elephant grass silage with increasing levels of inclusion of patauá meal. The experiment was conducted in a completely randomized design, with four concentrations of patauá meal (7%, 14%, 21%, and 28%, based on fresh matter) and a control without patauá, and five replicates. The elephant grass was collected manually after 60 days of growth. After chopping, the grass was homogenized, mixed with the patauá meal according to the established treatments, and ensiled in experimental silos of 15 L. The inclusion of patauá meal in elephant grass silage had positive effects on the chemical composition and effluent loss. It significantly increased dry matter, organic matter, crude protein, nitrogen insoluble in neutral detergent and acid, ethereal extract, lignin, and non-fibrous carbohydrates of the silages. It also reduced effluent losses, neutral and acid detergent fiber contents, and cellulose. Our findings contribute towards reducing the environmental impact caused by the production of effluents during ensilage of tropical grasses and providing a potential use for the residue from the production of patauá oil, thus avoiding disposal in the environment.
DOI: 10.6084/m9.figshare.14277518
title: Nestling development and data on nests and eggs of Topaza pella (Aves, Trochilidae) in Amapá state, northern Brazil

description: ABSTRACT The Crimson Topaz, Topaza pella, is the least known of the two hummingbird species of this exclusively Amazonian trochilid genus, that also includes T. pyra. Most available information on T. pella nests, young and reproductive behavior is based on anecdotal observations from Guyana in the 1930s and 1950s. Here, we provide new data on nest description, eggs and parental care of T. pella, and the growth and development of two nestlings over a 22-day period. We studied four nests in areas of dense terra firme forest in the state of Amapá, Brazil. All nests were in forked branches of shrubs over water bodies, and had a cup-like form. One nest contained two elongated white eggs, and another, two nestlings, which had their development recorded until they left the nest.
DOI: 10.6084/m9.figshare.14277513.v1
title: Performance and economic viability of tambaqui, Colossoma macropomum, selectively bred for weight gain

description: ABSTRACT Tambaqui, Colossoma macropomum, is one of the most produced species in Brazilian fish farming, which has boosted the development of new technologies to increase its productivity. The aim of this study was to evaluate production performance in two second-generation tambaqui stocks selectively bred for weight gain in a semi-intensive rearing system and assess its influence on total production cost. We analyzed 300 fish (initial mean weight and standard length of 160 g and 17 cm, respectively) of two families (A and B, 150 fish each). The fish were individually marked with microchips and stocked in an 800-m2 excavated pond. For economic analysis, the obtained performance data were extrapolated for a fish farm with a 10-ha pond, adopting the Total Production Cost methodology. After 270 days of farming, the fish from family B were significantly superior (p &lt; 0.05) for all analyzed performance parameters (final weight = 1965.0 g; weight gain = 1786.7 g; biomass gain = 255.2 kg) and morphometric growth in relation to the fish from family A (final weight = 1881.0 g; weight gain = 1737.5 g; biomass gain: 217.7 kg). The total production cost estimations indicated that fish from family B would allow for a 4% reduction in the average fixed cost and a 1% decrease in the total average production cost.
DOI: 10.6084/m9.figshare.14277516.v1
title: Total mercury in wild felids occurring in protected areas in the central Brazilian Amazon

description: ABSTRACT This is the first study to investigate mercury (Hg) contamination in felid species in the Brazilian Amazon. We collected 26 fur samples from wild felids of four species (Puma concolor, Panthera onca, Leopardus pardalis and Leopardus wiedii) occurring in the Mamirauá and Amanã sustainable development reserves, in the state of Amazonas. Samples were from museum specimens, except for five P. onca samples collected from free-living individuals. Total Hg concentrations ranged from 0.12 to 48.1 µg g-1. Concentrations of Hg did not differ significantly between museum specimens and live individuals of P. onca, but varied significantly among species, with significantly higher concentrations for P. onca and L. pardalis, which could be related to factors such as diet and habitat.
DOI: 10.6084/m9.figshare.14277518.v1
title: Nestling development and data on nests and eggs of Topaza pella (Aves, Trochilidae) in Amapá state, northern Brazil

description: ABSTRACT The Crimson Topaz, Topaza pella, is the least known of the two hummingbird species of this exclusively Amazonian trochilid genus, that also includes T. pyra. Most available information on T. pella nests, young and reproductive behavior is based on anecdotal observations from Guyana in the 1930s and 1950s. Here, we provide new data on nest description, eggs and parental care of T. pella, and the growth and development of two nestlings over a 22-day period. We studied four nests in areas of dense terra firme forest in the state of Amapá, Brazil. All nests were in forked branches of shrubs over water bodies, and had a cup-like form. One nest contained two elongated white eggs, and another, two nestlings, which had their development recorded until they left the nest.
DOI: 10.6084/m9.figshare.14277520
title: Effects of experimental lightgaps and topography on enrichment plantings in a central Amazonian secondary forest

description: ABSTRACT Enrichment plantings into secondary forest are an important option in restoring species diversity and ecosystem services. However, little attention has been given to environmental requirements for species performance. This study evaluated the effects of lightgaps and topographic position on the growth and survival of four native tree species (Pouteria caimito, Garcinia macrophylla, Dipteryx odorata and Cynometra bauhiniaefolia) planted into a 26-year old secondary forest originating from abandoned pastures in the central Amazon Basin. Artificial lightgaps and control plots under closed canopy were uniformly distributed on plateaus and bottomlands near water bodies. Seedlings were planted randomly into the plots and monitored for 28 months. Seedling survival rate was high (93%) and did not differ among species. Overall, lightgaps produced a 38% increase in seedling height relative to the controls. Although the four species naturally occur in mature forest, two of the four grew significantly more in lightgaps than in closed canopy secondary forest. Overall, bottomlands facilitated greater seedling growth in height (38%) relative to plateaus, but only one species exhibited a significant increase. This study shows the importance of the environmental variability generated with canopy openings along the topographic gradient, suggesting that both the selection of species and microsite conditions of planting sites have to be considered important criteria in the recovery of degraded areas.
DOI: 10.6084/m9.figshare.14277513
title: Performance and economic viability of tambaqui, Colossoma macropomum, selectively bred for weight gain

description: ABSTRACT Tambaqui, Colossoma macropomum, is one of the most produced species in Brazilian fish farming, which has boosted the development of new technologies to increase its productivity. The aim of this study was to evaluate production performance in two second-generation tambaqui stocks selectively bred for weight gain in a semi-intensive rearing system and assess its influence on total production cost. We analyzed 300 fish (initial mean weight and standard length of 160 g and 17 cm, respectively) of two families (A and B, 150 fish each). The fish were individually marked with microchips and stocked in an 800-m2 excavated pond. For economic analysis, the obtained performance data were extrapolated for a fish farm with a 10-ha pond, adopting the Total Production Cost methodology. After 270 days of farming, the fish from family B were significantly superior (p &lt; 0.05) for all analyzed performance parameters (final weight = 1965.0 g; weight gain = 1786.7 g; biomass gain = 255.2 kg) and morphometric growth in relation to the fish from family A (final weight = 1881.0 g; weight gain = 1737.5 g; biomass gain: 217.7 kg). The total production cost estimations indicated that fish from family B would allow for a 4% reduction in the average fixed cost and a 1% decrease in the total average production cost.
DOI: 10.6084/m9.figshare.14277516
title: Total mercury in wild felids occurring in protected areas in the central Brazilian Amazon

description: ABSTRACT This is the first study to investigate mercury (Hg) contamination in felid species in the Brazilian Amazon. We collected 26 fur samples from wild felids of four species (Puma concolor, Panthera onca, Leopardus pardalis and Leopardus wiedii) occurring in the Mamirauá and Amanã sustainable development reserves, in the state of Amazonas. Samples were from museum specimens, except for five P. onca samples collected from free-living individuals. Total Hg concentrations ranged from 0.12 to 48.1 µg g-1. Concentrations of Hg did not differ significantly between museum specimens and live individuals of P. onca, but varied significantly among species, with significantly higher concentrations for P. onca and L. pardalis, which could be related to factors such as diet and habitat.
DOI: 10.6084/m9.figshare.14277510.v1
title: Effects of inclusion of patauá, Oenocarpus bataua meal on elephant grass silage

description: ABSTRACT Elephant grass silages have high moisture content, causing nutrient loss, mainly by effluent production. The use of moisture absorbent additives, such as patauá, Oenocarpus bataua meal, can be a strategy to reduce losses in these silages. The aim of this study was to determine the fermentation losses, microbiological composition, fermentative characteristics, and chemical composition of elephant grass silage with increasing levels of inclusion of patauá meal. The experiment was conducted in a completely randomized design, with four concentrations of patauá meal (7%, 14%, 21%, and 28%, based on fresh matter) and a control without patauá, and five replicates. The elephant grass was collected manually after 60 days of growth. After chopping, the grass was homogenized, mixed with the patauá meal according to the established treatments, and ensiled in experimental silos of 15 L. The inclusion of patauá meal in elephant grass silage had positive effects on the chemical composition and effluent loss. It significantly increased dry matter, organic matter, crude protein, nitrogen insoluble in neutral detergent and acid, ethereal extract, lignin, and non-fibrous carbohydrates of the silages. It also reduced effluent losses, neutral and acid detergent fiber contents, and cellulose. Our findings contribute towards reducing the environmental impact caused by the production of effluents during ensilage of tropical grasses and providing a potential use for the residue from the production of patauá oil, thus avoiding disposal in the environment.
DOI: 10.6084/m9.figshare.14277520.v1
title: Effects of experimental lightgaps and topography on enrichment plantings in a central Amazonian secondary forest

description: ABSTRACT Enrichment plantings into secondary forest are an important option in restoring species diversity and ecosystem services. However, little attention has been given to environmental requirements for species performance. This study evaluated the effects of lightgaps and topographic position on the growth and survival of four native tree species (Pouteria caimito, Garcinia macrophylla, Dipteryx odorata and Cynometra bauhiniaefolia) planted into a 26-year old secondary forest originating from abandoned pastures in the central Amazon Basin. Artificial lightgaps and control plots under closed canopy were uniformly distributed on plateaus and bottomlands near water bodies. Seedlings were planted randomly into the plots and monitored for 28 months. Seedling survival rate was high (93%) and did not differ among species. Overall, lightgaps produced a 38% increase in seedling height relative to the controls. Although the four species naturally occur in mature forest, two of the four grew significantly more in lightgaps than in closed canopy secondary forest. Overall, bottomlands facilitated greater seedling growth in height (38%) relative to plateaus, but only one species exhibited a significant increase. This study shows the importance of the environmental variability generated with canopy openings along the topographic gradient, suggesting that both the selection of species and microsite conditions of planting sites have to be considered important criteria in the recovery of degraded areas.
DOI: 10.6084/m9.figshare.14277521
title: Tovomita nebulosa (Clusiaceae), a new species from Cerro de la Neblina, Venezuela

description: ABSTRACT Although the number of recently described Tovomita species is relatively high, much more remains to be done, given that each new survey of representative Amazonian collections reveals many potentially undescribed taxa. In the treatment for Tovomita published in Flora of the Venezuelan Guayana, at least six distinct morphotypes did not match any previously described species. Here we recognize morphotype “D” as a new endemic species from Cerro de la Neblina. Additionally, we provide an identification key to the Tovomita species in Venezuela.
DOI: 10.6084/m9.figshare.14277527.v1
title: First record of the gray-legged tinamou, Crypturellus duidae, and other poor-soil specialist birds from peatlands in the Putumayo River basin, Loreto, Peru

description: ABSTRACT Crypturellus duidae (Tinamidae) is a poor-soil specialist with isolated populations in Amazonia, and is considered restricted to white-sand forest habitats. We report the first record of C. duidae in a peatland forest in northern Peru, in the Putumayo River basin. Our record extends the known distribution of C. duidae between two disjoint areas of occurrence in Peru and Colombia, and shows its presence in peatland forest, another forest type on nutrient-poor soils. Additionally, we report the presence of other poor-soil specialist bird species that were previously registered in peatlands. Together with the new record of C. duidae, these bird records provide evidence of the diversity of poor-soil specialists in peatland forests.
DOI: 10.6084/m9.figshare.14277521.v1
title: Tovomita nebulosa (Clusiaceae), a new species from Cerro de la Neblina, Venezuela

description: ABSTRACT Although the number of recently described Tovomita species is relatively high, much more remains to be done, given that each new survey of representative Amazonian collections reveals many potentially undescribed taxa. In the treatment for Tovomita published in Flora of the Venezuelan Guayana, at least six distinct morphotypes did not match any previously described species. Here we recognize morphotype “D” as a new endemic species from Cerro de la Neblina. Additionally, we provide an identification key to the Tovomita species in Venezuela.
DOI: 10.6084/m9.figshare.14277522
title: New records of the invasive macrophyte, Urochloa arrecta extend its range to eastern Brazilian Amazon altered freshwater ecosystems

description: ABSTRACT Invasive species influence the structure and functioning of ecosystems, as they affect native species, significantly decreasing their diversity. Aquatic ecosystems harbor a great biodiversity, and invasive macrophytes significantly affect the native plant communities, causing a cascade effect on other trophic levels. Among invasive macrophytes, Urochloa arrecta is cause for concern in the Neotropics and is found in several regions of Brazil, specially in the southeastern and southern regions. So far the species had been recorded only in the northern state of Amazonas. We report the first record of the species in the state of Pará, in the eastern Brazilian Amazon. We emphasize that identifying sites where this species is invasive is the best strategy to prevent its spread, aiming at the protection and conservation of Amazonian freshwater ecosystems.
DOI: 10.6084/m9.figshare.14277522.v1
title: New records of the invasive macrophyte, Urochloa arrecta extend its range to eastern Brazilian Amazon altered freshwater ecosystems

description: ABSTRACT Invasive species influence the structure and functioning of ecosystems, as they affect native species, significantly decreasing their diversity. Aquatic ecosystems harbor a great biodiversity, and invasive macrophytes significantly affect the native plant communities, causing a cascade effect on other trophic levels. Among invasive macrophytes, Urochloa arrecta is cause for concern in the Neotropics and is found in several regions of Brazil, specially in the southeastern and southern regions. So far the species had been recorded only in the northern state of Amazonas. We report the first record of the species in the state of Pará, in the eastern Brazilian Amazon. We emphasize that identifying sites where this species is invasive is the best strategy to prevent its spread, aiming at the protection and conservation of Amazonian freshwater ecosystems.
DOI: 10.6084/m9.figshare.14277525
title: Conservation potential of shade-tolerant forest species in agricultural mosaics in the eastern Brazilian Amazon

description: ABSTRACT Shade-tolerant forest species are among the most susceptible to habitat loss in agricultural mosaics, where a variety of croplands is connected to forests at different levels of anthropogenic disturbance. We aimed to evaluate the community similarity of shade-tolerant species among different land use types across agricultural mosaics with different levels of disturbance. The study was conducted in three municipalities in southern and southeastern Pará state, in eastern Amazonia. A multiple-community similarity measure based on the Horn similarity index was used to compare land use types and assess the resilience of shade-tolerant species towards forest loss and disturbance at the landscape level. High shade-tolerant species similarity was found between mature forest fragments that underwent different levels of disturbance in all three agricultural mosaics, but secondary forests had lower similarity with mature forest in the most fragmented and altered mosaic. Shade-tolerant species showed very low density in croplands, but the same group of species seemed to colonize agricultural fields of annual crops and clean pasture, as they showed high community similarity. Another group of species was present in invaded pastures, probably due to the effects of time since land abandonment after woody species colonization. Mixed tree plantations were more similar to mature and secondary forests than other types of croplands. Shade-tolerant species similarity was higher among land use types inserted in agricultural landscapes that maintained conserved forest fragments. Our results suggest that the conservation of mature forests and landscape connectivity are crucial to the maintenance of shade-tolerant species in agricultural mosaics.
DOI: 10.6084/m9.figshare.14277525.v1
title: Conservation potential of shade-tolerant forest species in agricultural mosaics in the eastern Brazilian Amazon

description: ABSTRACT Shade-tolerant forest species are among the most susceptible to habitat loss in agricultural mosaics, where a variety of croplands is connected to forests at different levels of anthropogenic disturbance. We aimed to evaluate the community similarity of shade-tolerant species among different land use types across agricultural mosaics with different levels of disturbance. The study was conducted in three municipalities in southern and southeastern Pará state, in eastern Amazonia. A multiple-community similarity measure based on the Horn similarity index was used to compare land use types and assess the resilience of shade-tolerant species towards forest loss and disturbance at the landscape level. High shade-tolerant species similarity was found between mature forest fragments that underwent different levels of disturbance in all three agricultural mosaics, but secondary forests had lower similarity with mature forest in the most fragmented and altered mosaic. Shade-tolerant species showed very low density in croplands, but the same group of species seemed to colonize agricultural fields of annual crops and clean pasture, as they showed high community similarity. Another group of species was present in invaded pastures, probably due to the effects of time since land abandonment after woody species colonization. Mixed tree plantations were more similar to mature and secondary forests than other types of croplands. Shade-tolerant species similarity was higher among land use types inserted in agricultural landscapes that maintained conserved forest fragments. Our results suggest that the conservation of mature forests and landscape connectivity are crucial to the maintenance of shade-tolerant species in agricultural mosaics.
DOI: 10.6084/m9.figshare.14277527
title: First record of the gray-legged tinamou, Crypturellus duidae, and other poor-soil specialist birds from peatlands in the Putumayo River basin, Loreto, Peru

description: ABSTRACT Crypturellus duidae (Tinamidae) is a poor-soil specialist with isolated populations in Amazonia, and is considered restricted to white-sand forest habitats. We report the first record of C. duidae in a peatland forest in northern Peru, in the Putumayo River basin. Our record extends the known distribution of C. duidae between two disjoint areas of occurrence in Peru and Colombia, and shows its presence in peatland forest, another forest type on nutrient-poor soils. Additionally, we report the presence of other poor-soil specialist bird species that were previously registered in peatlands. Together with the new record of C. duidae, these bird records provide evidence of the diversity of poor-soil specialists in peatland forests.