cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.8317391
title: The Genomic Reference Resource for African Cattle: genome sequences and high-density array variants.

description: <em>The diversity in genome resources is fundamental to designing genomic strategies for local breed improvement and utilisation. These resources also support gene discovery and enhance our understanding of the mechanisms of resilience with applications beyond local breeds. We report here the genome sequences of 573 samples (198 new genomes) and high-density (HD) array genotyping of 1,082 samples (537 new samples) from indigenous African cattle populations. The new sequences have an average genome coverage of ~30X, three times higher than the average (~10X) of the over 300 sequences already in the public domain. Following variant quality checks, we identified approximately 32.4 million sequence variants and 661,943 HD autosomal variants mapped to the Bos taurus reference genome (ARS-UCD1.2). The new datasets were generated as part of the Centre for Tropical Livestock Genetic and Health (CTLGH) Genomic Reference Resource for African Cattle (GRRFAC) initiative, which aspires to facilitate the generation of this livestock resource. We hope this resource will be utilised by the global scientific community and breeders for sustainable global livestock improvement.</em>
description: This project was funded by the Bill and Melinda Gates Foundation (BMGF) and with UK aid from the UK Government's Department for International Development (Grant Agreement OPP1127286) under the auspices of the Centre for Tropical Livestock Genetics and Health (CTLGH), established jointly by the University of Edinburgh, SRUC (Scotland's Rural College), and the International Livestock Research Institute. The findings and conclusions are those of the authors and do not necessarily reflect the positions or policies of the BMGF or the UK Government. We thank the CGIAR livestock program (CRP) for supporting the sampling component of the research. We also thank the AU-IBAR for linking us to the various African partners, and we acknowledge the valuable support of the various African National Institutes for granting the Nagoya permits for sampling and utilization of the genomic resources from their countries. We are grateful to the Chinese Government's contribution to the CAAS-ILRI Joint Laboratory on Livestock and Forage Genetic Resources in Beijing (2023-YWF-ZX-02). We thank Professor Apollinaire Djikeng for his continuous support to the CTLGH - GRRFAC project.
DOI: 10.5281/zenodo.8317390
title: The Genomic Reference Resource for African Cattle: genome sequences and high-density array variants.

description: <em>The diversity in genome resources is fundamental to designing genomic strategies for local breed improvement and utilisation. These resources also support gene discovery and enhance our understanding of the mechanisms of resilience with applications beyond local breeds. We report here the genome sequences of 573 samples (198 new genomes) and high-density (HD) array genotyping of 1,082 samples (537 new samples) from indigenous African cattle populations. The new sequences have an average genome coverage of ~30X, three times higher than the average (~10X) of the over 300 sequences already in the public domain. Following variant quality checks, we identified approximately 32.4 million sequence variants and 661,943 HD autosomal variants mapped to the Bos taurus reference genome (ARS-UCD1.2). The new datasets were generated as part of the Centre for Tropical Livestock Genetic and Health (CTLGH) Genomic Reference Resource for African Cattle (GRRFAC) initiative, which aspires to facilitate the generation of this livestock resource. We hope this resource will be utilised by the global scientific community and breeders for sustainable global livestock improvement.</em>
description: This project was funded by the Bill and Melinda Gates Foundation (BMGF) and with UK aid from the UK Government's Department for International Development (Grant Agreement OPP1127286) under the auspices of the Centre for Tropical Livestock Genetics and Health (CTLGH), established jointly by the University of Edinburgh, SRUC (Scotland's Rural College), and the International Livestock Research Institute. The findings and conclusions are those of the authors and do not necessarily reflect the positions or policies of the BMGF or the UK Government. We thank the CGIAR livestock program (CRP) for supporting the sampling component of the research. We also thank the AU-IBAR for linking us to the various African partners, and we acknowledge the valuable support of the various African National Institutes for granting the Nagoya permits for sampling and utilization of the genomic resources from their countries. We are grateful to the Chinese Government's contribution to the CAAS-ILRI Joint Laboratory on Livestock and Forage Genetic Resources in Beijing (2023-YWF-ZX-02). We thank Professor Apollinaire Djikeng for his continuous support to the CTLGH - GRRFAC project.
DOI: 10.5519/qd.vb66o524
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1001 records)
DOI: 10.5281/zenodo.8373278
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Barbara Frances Palser, http://www.wikidata.org/entity/Q111653953. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q111653953
DOI: 10.5281/zenodo.8373277
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Barbara Frances Palser, http://www.wikidata.org/entity/Q111653953. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q111653953
DOI: 10.18112/openneuro.ds004660.v1.0.1
title: TNO
DOI: 10.34740/kaggle/dsv/6527966
title: WallStreetBets 2022
DOI: 10.5517/ccdc.csd.cc2h2wj0
title: CCDC 2296682: Experimental Crystal Structure Determination

description: Related Article: Malte Fischer, Marc Schmidtmann, Rüdiger Beckhaus|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.6462669
title: Data and R-scripts for the analyses of global woody angiosperm diversity

description: This repository contains data and R scripts necessary to reproduce results shown in the paper: <br> Buntarou Kusumoto, Anne Chao, Wolf L. Eiserhardt, Jens-Christian Svenning, Takayuki Shiono, Yasuhiro Kubota. Occurrence-based diversity estimation reveals macroecological and conservation knowledge gaps for global woody plants. Science Advances (accepted)
DOI: 10.5281/zenodo.6462668
title: Data and R-scripts for the analyses of global woody angiosperm diversity

description: This repository contains data and R scripts necessary to reproduce results shown in the paper: <br> Buntarou Kusumoto, Anne Chao, Wolf L. Eiserhardt, Jens-Christian Svenning, Takayuki Shiono, Yasuhiro Kubota. Occurrence-based diversity estimation reveals macroecological and conservation knowledge gaps for global woody plants. Science Advances (accepted)
DOI: 10.34740/kaggle/dsv/6528214
title: Our World in Data - COVID-19
DOI: 10.5281/zenodo.8373314
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Eberhard Hermann Röttger, http://www.wikidata.org/entity/Q94942764. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q94942764
DOI: 10.5281/zenodo.8373313
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Eberhard Hermann Röttger, http://www.wikidata.org/entity/Q94942764. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q94942764
DOI: 10.5281/zenodo.8373316
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Pierre Réal, http://www.wikidata.org/entity/Q3386899. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3386899
DOI: 10.5281/zenodo.8373315
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Pierre Réal, http://www.wikidata.org/entity/Q3386899. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q3386899
DOI: 10.5281/zenodo.8373335
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Nikolay Przhevalsky, http://www.wikidata.org/entity/Q192442. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q192442
DOI: 10.5281/zenodo.8373339
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Edna Melinda Porter, http://www.wikidata.org/entity/Q98640477. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q98640477
DOI: 10.5281/zenodo.8373338
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Edna Melinda Porter, http://www.wikidata.org/entity/Q98640477. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q98640477
DOI: 10.5281/zenodo.8373341
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by C. M. Pomerat, http://www.wikidata.org/entity/Q94535014. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q94535014
DOI: 10.5281/zenodo.8373340
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by C. M. Pomerat, http://www.wikidata.org/entity/Q94535014. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q94535014
DOI: 10.5281/zenodo.8373343
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Charles Plumier, http://www.wikidata.org/entity/Q468460. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q468460
DOI: 10.5281/zenodo.8373342
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Charles Plumier, http://www.wikidata.org/entity/Q468460. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q468460
DOI: 10.5281/zenodo.8373345
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Victor Planchat, http://www.wikidata.org/entity/Q95388848. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q95388848
DOI: 10.5281/zenodo.8373344
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Victor Planchat, http://www.wikidata.org/entity/Q95388848. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q95388848
DOI: 10.5281/zenodo.8373347
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Giulio Andrea Pirona, http://www.wikidata.org/entity/Q14886396. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q14886396
DOI: 10.5281/zenodo.8373346
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Giulio Andrea Pirona, http://www.wikidata.org/entity/Q14886396. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q14886396
DOI: 10.5281/zenodo.8373349
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by François-Jules Pictet de la Rive, http://www.wikidata.org/entity/Q118957. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q118957
DOI: 10.5281/zenodo.8373348
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by François-Jules Pictet de la Rive, http://www.wikidata.org/entity/Q118957. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q118957
DOI: 10.5281/zenodo.8373351
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Lily May Perry, http://www.wikidata.org/entity/Q5395639. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q5395639
DOI: 10.5281/zenodo.8373350
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Lily May Perry, http://www.wikidata.org/entity/Q5395639. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q5395639
DOI: 10.5281/zenodo.8373365
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Ella Mae Noffsinger, http://www.wikidata.org/entity/Q106275403. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q106275403
DOI: 10.5281/zenodo.8373364
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Ella Mae Noffsinger, http://www.wikidata.org/entity/Q106275403. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q106275403
DOI: 10.5281/zenodo.8373367
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Christian Ludwig Nitzsch, http://www.wikidata.org/entity/Q63822. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q63822
DOI: 10.5281/zenodo.8373366
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Christian Ludwig Nitzsch, http://www.wikidata.org/entity/Q63822. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q63822
DOI: 10.6084/m9.figshare.24187947
title: casehold.tar.gz

description: lexglue casehold dataset.
DOI: 10.5066/p9x84tan
title: Predicted exotic annual grass abundance in rangelands of the western United States using various precipitation scenarios for 2022

description: Invasion of exotic annual grass (EAG), such as cheatgrass (Bromus tectorum), red brome (Bromus rubens), and medusahead (Taeniatherum caput-medusae), could have irreversible degradation impact to arid and semiarid rangeland ecosystems in the western United States. The distribution and abundance of these EAG species are highly influenced by weather variables such as temperature and precipitation. We set out to develop a machine learning modelling approach using a lightGBM algorithm to predict how changes in annual and immediate past precipitation regimes impact the abundance of EAG in the study area. The predictive model primarily utilized edaphic and weather variables and a seed source proxy from previous years to make the predictions. We achieved strong training accuracy (r= 0.95 and MdAE=2.36 of percent cover) and test accuracy (r= 0.79 and MdAE=4.54 of percent cover). We predicted five versions of EAG percent cover maps for 2022 with different precipitation scenarios, i.e., with the 9-year average, half of the average, three fourth of the average, one and half of the average, and twice the average precipitation. Five versions of spatially explicit EAG percent cover 2022 datasets can provide valuable information to local and regional land managers so they would know what EAG abundance would look like with certain precipitation scenario.
DOI: 10.5066/p9quirnp
title: Carbon stocks and fluxes for the conterminous United States 2001-2020

description: Spatially explicit maps of annual forest carbon stocks and tabular estimates of land use/land cover change, LULC transitions, carbon stocks and carbon fluxes for selected regions and geographies. Estimates span the period from 2001-2020. Scenarios included are defined with a unique numerical identifier. scn160 = Full Simulation (Land use and Climate Effects) scn155 = Climate Effects only scn156 = No Effects included scn161 = Land Use Effects only Raster output is organized into three categories: CBM pools: Include 14 unique carbon pools used in the model, including 5 biomass pools and 9 dead organic matter (DOM) pools. IPCC pools: Include aggregations of CBM pool types corresponding to IPCC guidelines, including Aboveground live carbon, belowground live carbon, deadwood, litter, and soil. Other pools: Include other aggregations of CBM pools. Additional material can be found on the authors Github repository. The repo contains an empty LUCAS model which can be run to reproduce results and access all model inputs. A manuscript published with Carbon Balance and Management describes the methodological approach. Sleeter, B.M.; Frid, L.; Rayfield, B.; Daniel, C.J.; Zhu, Z.; Marvin, D.C., Operational assessment tool for forest carbon dynamics for the United States: a new spatially-explicit approach linking the LUCAS and CBM-CFS3 models, Carbon Balance and Management
DOI: 10.6084/m9.figshare.24174552.v1
title: Data for (A neglected anthropogenic source of carbon triggered by the combustion of coal: evidence from riverine sulfate, [Paper # 2023GL106392]).

description: These are datasets for the manuscript submitted to GRL (Source of these data are listed in the files)
DOI: 10.5519/qd.ejreuk9x
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.34740/kaggle/dsv/6528942
title: Global Crypto Currency Price Database
DOI: 10.15151/esrf-es-1299138549
title: Heidelberg BAG (HeidelBAG)

description: The HeidelBAG unites macromolecular crystallography of EMBL Heidelberg and the Heidelberg University Biochemistry Center (BZH). Central to all projects are large assemblies involved in chromosome organization and transcription control, in nuclear and cytoplasmic RNA regulation and modification, in translational control by ribosome associated factors or further in protein targeting, membrane protein insertion or post-translational modification. While O. Barabas from EMBL has left the BAG, Svetlana Dodonova and Sebastian Eustermann at EMBL will join and add projects on chromatin organization. Nearly all projects make use of integrated structural biology techniques (MX, SAXS/SANS, NMR, cryo-EM, AI approaches) that are combined with complementary methods, a strategy that warranties the continuous success of the BAG. More and more the detailed architecture and mechanistic description of entire macromolecular machines come into focus. The BAG reports on 17 publications and 30 PDB entries.
DOI: 10.15151/esrf-es-1299176129
title: Advanced Photon Source, Sector 21 - The Life Sciences Collaborative Access Team (LS-CAT) - CAT Member Macromolecular Crystallography

description: The Life Sciences Collaborative Access Team (LS-CAT) provides Macromolecular Crystallography support to our CAT members from eight Universities in the USA, including Northwestern University, University of Michigan, Wayne State University, Michigan State University, University Wisconsin, Vanderbilt University, and University of Illinois at Chicago, and also to General Users. With a one-year dark period approaching for the upgrade of the Advanced Photon Source (APS-U), we are seeking beam time for our CAT Member laboratories at ESRF by way of this Block Allocation Group, consisting of a portion of our CAT Member PIs and their laboratory members, in order to keep supporting their research and future funding. LS-CAT is organizing our CAT Members into this BAG Proposal, and other proposals we will submit, in order to streamline the process for our CAT Members, and for the Staff of Lightsources to which we are applying for access to beam time.