cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21227/qrhd-a469
title: Refined MIMIC-III 30-day mortality prediction of sepsis-3 patients

description: A refined data from supplementary materials of "Predicting 30-days mortality for MIMIC-III patients with sepsis-3: a machine learning approach using XGboost". Rows with invalid age values were removed and feature columns were selected, and the data type of each column was adjusted.
DOI: 10.6084/m9.figshare.19409903
title: Intravital microscopy datasets examining key nephron segments of transplanted decellularized kidneys

description: This study contains intravital microscopy (IVM) data examining the microarchitecture of acellular kidney scaffolds. Acellular scaffolds are cell-free collagen-based matrices derived from native organs that can be used as templates for regenerative medicine applications. This data set contains <em>in vivo</em> assays that evaluate the effectiveness of decellularization and how these acellular nephron compartments perform in the post-transplantation environment. Qualitative and quantitative assessments of scaffold DNA concentrations, tissue fluorescence signals, and structural and functional integrities of decellularized tubular and peritubular capillary segments were acquired and compared to the native (non-transplanted) organ. Cohorts of 2-3-month-old male Sprague Dawley rats were used: non-transplanted (n = 4), transplanted day 0 (n = 4), transplanted day 1 (n = 4), transplanted day 2 (n = 4), and transplanted day 7 (n = 4). Micrographs and supporting measurements are provided to illustrate IVM processes used to perform this study and are publicly available in a data repository to assist scientific reproducibility and extend the use of this powerful imaging application to analyze other scaffold systems.
DOI: 10.6084/m9.figshare.19409903.v8
title: Intravital fluorescent microscopy datasets for examining the microarchitecture of key nephron segments of transplanted decellularized kidneys - old discard

description: This study contains intravital microscopy (IVM) data examining the microarchitecture of acellular kidney scaffolds. Acellular scaffolds are cell-free collagen-based matrices derived from native organs that can be used as templates for regenerative medicine applications. This data set contains <em>in vivo</em> assays that evaluate the effectiveness of decellularization and how these acellular nephron compartments perform in the post-transplantation environment. Qualitative and quantitative assessments of scaffold DNA concentrations, tissue fluorescence signals, and structural and functional integrities of decellularized tubular and peritubular capillary segments were acquired and compared to the native (non-transplanted) organ. Cohorts of 2-3-month-old male Sprague Dawley rats were used: non-transplanted (n = 4), transplanted day 0 (n = 4), transplanted day 1 (n = 4), transplanted day 2 (n = 4), and transplanted day 7 (n = 4). Micrographs and supporting measurements are provided to illustrate IVM processes used to perform this study and are publicly available in a data repository to assist scientific reproducibility and extend the use of this powerful imaging application to analyze other scaffold systems.
DOI: 10.6084/m9.figshare.19409903.v9
title: Intravital microscopy datasets examining key nephron segments of transplanted decellularized kidneys

description: This study contains intravital microscopy (IVM) data examining the microarchitecture of acellular kidney scaffolds. Acellular scaffolds are cell-free collagen-based matrices derived from native organs that can be used as templates for regenerative medicine applications. This data set contains <em>in vivo</em> assays that evaluate the effectiveness of decellularization and how these acellular nephron compartments perform in the post-transplantation environment. Qualitative and quantitative assessments of scaffold DNA concentrations, tissue fluorescence signals, and structural and functional integrities of decellularized tubular and peritubular capillary segments were acquired and compared to the native (non-transplanted) organ. Cohorts of 2-3-month-old male Sprague Dawley rats were used: non-transplanted (n = 4), transplanted day 0 (n = 4), transplanted day 1 (n = 4), transplanted day 2 (n = 4), and transplanted day 7 (n = 4). Micrographs and supporting measurements are provided to illustrate IVM processes used to perform this study and are publicly available in a data repository to assist scientific reproducibility and extend the use of this powerful imaging application to analyze other scaffold systems.
DOI: 10.6084/m9.figshare.20492832.v1
title: octopus_mimus_decontaminated_gx

description: .......
DOI: 10.6084/m9.figshare.20492832
title: octopus_mimus_decontaminated_gx

description: .......
DOI: 10.7910/dvn/myiize
title: Replication Data for: Contagion, Confounding, and Causality: Confronting the Three C's of Observational Political Networks Research

description: The repository contains the R code and the Polity dataset used to produce the simulations and the Polity application results presented in the paper. It also contains the RDS objects of the simulated data and the plots produced from them.
DOI: 10.15468/4wn9dt
title: German Wikipedia - Species Pages

description: Species pages extracted from the German Wikipedia article XML dump from 2022-08-01. Multimedia, vernacular names and textual descriptions are extracted, but only pages with a taxobox or speciesbox template are recognized. See https://github.com/mdoering/wikipedia-dwca for details.
DOI: 10.5517/ccdc.csd.cc27rlby
title: CCDC 2078250: Experimental Crystal Structure Determination

description: Related Article: Chen Zhao, Zhenhua Zhu, Xiao-Lei Li, Jinkui Tang|2022|Inorg.Chem.Front.|9|4049|doi:10.1039/D2QI00754A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27rlcz
title: CCDC 2078251: Experimental Crystal Structure Determination

description: Related Article: Chen Zhao, Zhenhua Zhu, Xiao-Lei Li, Jinkui Tang|2022|Inorg.Chem.Front.|9|4049|doi:10.1039/D2QI00754A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28gbkn
title: CCDC 2099151: Experimental Crystal Structure Determination

description: Related Article: Younes Ouzidan, Betül Şen Yüksel, Yassir Filali Baba, Baraa Hafez, Youssef Kandri Rodi, Fouad Ouazzani Chahdi, Joel T. Mague, Ahmed El Hakmaoui, Mohamed Safi, Mohamed Akssira, El Mokhtar Essassi, Hicham Elmsellem|2022|Chem. Data Collect.|41|100902|doi:10.1016/j.cdc.2022.100902
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28gqbt
title: CCDC 2099516: Experimental Crystal Structure Determination

description: Related Article: Chen Zhao, Zhenhua Zhu, Xiao-Lei Li, Jinkui Tang|2022|Inorg.Chem.Front.|9|4049|doi:10.1039/D2QI00754A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28gqcv
title: CCDC 2099517: Experimental Crystal Structure Determination

description: Related Article: Chen Zhao, Zhenhua Zhu, Xiao-Lei Li, Jinkui Tang|2022|Inorg.Chem.Front.|9|4049|doi:10.1039/D2QI00754A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc297bd9
title: CCDC 2122210: Experimental Crystal Structure Determination

description: Related Article: Srinivas Samala, Woojeong Lim, Dong Kyun You, Kang Mun Lee, Hongil Jo, Kang Min Ok, Jongmin Park, Chang-Hee Lee|2022|Bioorg.Chem.|128|106044|doi:10.1016/j.bioorg.2022.106044
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29hjgt
title: CCDC 2130086: Experimental Crystal Structure Determination

description: Related Article: Shreenibasa Sa, Ashutosh Sahoo, Susmita Mukherjee, Ajay Perumal, Krishnan Venkatasubbaiah|2022|Dyes Pigm.|206|110585|doi:10.1016/j.dyepig.2022.110585
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27l7lp
title: CCDC 2073112: Experimental Crystal Structure Determination

description: Related Article: Ananda Kumar Jami, Smruti Prangya Behera, Suman Mondal, Viswanathan Baskar|2022|Inorg.Chem.Commun.|143|109784|doi:10.1016/j.inoche.2022.109784
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27l7nr
title: CCDC 2073114: Experimental Crystal Structure Determination

description: Related Article: Ananda Kumar Jami, Smruti Prangya Behera, Suman Mondal, Viswanathan Baskar|2022|Inorg.Chem.Commun.|143|109784|doi:10.1016/j.inoche.2022.109784
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27l7ps
title: CCDC 2073115: Experimental Crystal Structure Determination

description: Related Article: Ananda Kumar Jami, Smruti Prangya Behera, Suman Mondal, Viswanathan Baskar|2022|Inorg.Chem.Commun.|143|109784|doi:10.1016/j.inoche.2022.109784
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc27l7mq
title: CCDC 2073113: Experimental Crystal Structure Determination

description: Related Article: Ananda Kumar Jami, Smruti Prangya Behera, Suman Mondal, Viswanathan Baskar|2022|Inorg.Chem.Commun.|143|109784|doi:10.1016/j.inoche.2022.109784
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bvr43
title: CCDC 2170655: Experimental Crystal Structure Determination

description: Related Article: Melinda R. Serrato, Mohand Melaimi, Guy Bertrand|2022|Chem.Commun.|58|7519|doi:10.1039/D2CC02565E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bvr54
title: CCDC 2170656: Experimental Crystal Structure Determination

description: Related Article: Melinda R. Serrato, Mohand Melaimi, Guy Bertrand|2022|Chem.Commun.|58|7519|doi:10.1039/D2CC02565E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bvr65
title: CCDC 2170657: Experimental Crystal Structure Determination

description: Related Article: Melinda R. Serrato, Mohand Melaimi, Guy Bertrand|2022|Chem.Commun.|58|7519|doi:10.1039/D2CC02565E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bvr76
title: CCDC 2170658: Experimental Crystal Structure Determination

description: Related Article: Melinda R. Serrato, Mohand Melaimi, Guy Bertrand|2022|Chem.Commun.|58|7519|doi:10.1039/D2CC02565E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bvr87
title: CCDC 2170659: Experimental Crystal Structure Determination

description: Related Article: Melinda R. Serrato, Mohand Melaimi, Guy Bertrand|2022|Chem.Commun.|58|7519|doi:10.1039/D2CC02565E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bz0y9
title: CCDC 2173811: Experimental Crystal Structure Determination

description: Related Article: Shumei Cao, Honghui Tan, Xing Liu, Chun-Mei Huang, Qi-Pin Qin, Jian Zhou|2022|Dyes Pigm.|206|110587|doi:10.1016/j.dyepig.2022.110587
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bz0zb
title: CCDC 2173812: Experimental Crystal Structure Determination

description: Related Article: Shumei Cao, Honghui Tan, Xing Liu, Chun-Mei Huang, Qi-Pin Qin, Jian Zhou|2022|Dyes Pigm.|206|110587|doi:10.1016/j.dyepig.2022.110587
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bz10d
title: CCDC 2173813: Experimental Crystal Structure Determination

description: Related Article: Shumei Cao, Honghui Tan, Xing Liu, Chun-Mei Huang, Qi-Pin Qin, Jian Zhou|2022|Dyes Pigm.|206|110587|doi:10.1016/j.dyepig.2022.110587
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bz11f
title: CCDC 2173814: Experimental Crystal Structure Determination

description: Related Article: Shumei Cao, Honghui Tan, Xing Liu, Chun-Mei Huang, Qi-Pin Qin, Jian Zhou|2022|Dyes Pigm.|206|110587|doi:10.1016/j.dyepig.2022.110587
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bz12g
title: CCDC 2173815: Experimental Crystal Structure Determination

description: Related Article: Shumei Cao, Honghui Tan, Xing Liu, Chun-Mei Huang, Qi-Pin Qin, Jian Zhou|2022|Dyes Pigm.|206|110587|doi:10.1016/j.dyepig.2022.110587
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c1ncg
title: CCDC 2176335: Experimental Crystal Structure Determination

description: Related Article: Yali Wang, Man Zhu, Jing Liang, Na Zhang, Dejuan Sun, Hua Li, Lixia Chen|2022|Bioorg.Chem.|128|106067|doi:10.1016/j.bioorg.2022.106067
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c1ndh
title: CCDC 2176336: Experimental Crystal Structure Determination

description: Related Article: Yali Wang, Man Zhu, Jing Liang, Na Zhang, Dejuan Sun, Hua Li, Lixia Chen|2022|Bioorg.Chem.|128|106067|doi:10.1016/j.bioorg.2022.106067
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c1nnr
title: CCDC 2176344: Experimental Crystal Structure Determination

description: Related Article: Yali Wang, Man Zhu, Jing Liang, Na Zhang, Dejuan Sun, Hua Li, Lixia Chen|2022|Bioorg.Chem.|128|106067|doi:10.1016/j.bioorg.2022.106067
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c3vw7
title: CCDC 2178459: Experimental Crystal Structure Determination

description: Related Article: Yali Wang, Man Zhu, Jing Liang, Na Zhang, Dejuan Sun, Hua Li, Lixia Chen|2022|Bioorg.Chem.|128|106067|doi:10.1016/j.bioorg.2022.106067
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.5763965
title: Thermal stabilisation of the short DNA duplexes by acridine-4-carboxamide derivatives

description: The short oligodeoxynucleotide (ODN) probes are suitable for good discrimination of point mutations, however, they suffer from low melting temperatures. In this work, the strategy of using acridine-4-carboxamide intercalators to improve thermal stabilization is investigated. The study of large series of acridines revealed that optimal stabilization is achieved upon decoration of acridine by secondary carboxamide carrying sterically not demanding basic function bound through two-carbon linker. Presence of secondary carboxamides plays a key role in stabilization of the duplex. Two highly active intercalators were attached to short probes (13 or 18 bases; designed as a part of HFE gene) by click chemistry into positions 7 and/or 13 and proved to increase the melting temperate (T<sub>m</sub>) of the duplex by almost 8°C for the best combination. The acridines interact with both single- and double-stranded DNAs with substantially preferred interaction for the latter. The study of interaction suggested higher affinity of the acridines toward the GC- than AT-rich sequences. Good discrimination of two types of point mutations was shown.
DOI: 10.5281/zenodo.5763966
title: Thermal stabilisation of the short DNA duplexes by acridine-4-carboxamide derivatives

description: The short oligodeoxynucleotide (ODN) probes are suitable for good discrimination of point mutations, however, they suffer from low melting temperatures. In this work, the strategy of using acridine-4-carboxamide intercalators to improve thermal stabilization is investigated. The study of large series of acridines revealed that optimal stabilization is achieved upon decoration of acridine by secondary carboxamide carrying sterically not demanding basic function bound through two-carbon linker. Presence of secondary carboxamides plays a key role in stabilization of the duplex. Two highly active intercalators were attached to short probes (13 or 18 bases; designed as a part of HFE gene) by click chemistry into positions 7 and/or 13 and proved to increase the melting temperate (T<sub>m</sub>) of the duplex by almost 8°C for the best combination. The acridines interact with both single- and double-stranded DNAs with substantially preferred interaction for the latter. The study of interaction suggested higher affinity of the acridines toward the GC- than AT-rich sequences. Good discrimination of two types of point mutations was shown.