cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15125/bath-01058
title: Dataset for "Physiochemical Changes to TTCF Ensilication Investigated Using Time-Resolved SAXS"

description: This dataset contains the SAXS data obtained at the European Synchrotron Radiation Facility beamline ID02. All normalised SAXS data files and processed fitting including visualisation data via MatLab is included. All relevant data to the presented figures/table in the article is contained within this archive.
description: Pre-hydrolysed TEOS was prepared by mixing TEOS and ultrapure H2O 1:1 and the addition HCl to catalyse the reaction. This was added to 10 ml of 1 mg/ml TTCF solution, once both phases turned homogenous, at 1:50 ratio at pH 7 in a glass beaker. Using a sterile syringe, 1 ml of sample was taken and injected into a quartz capillary. SAXS measurements were performed on the Time-Resolved Ultra Small-Angle Scattering beam-line ID02 at the European Synchrotron Research Facility (ESRF), Grenoble, France [23]. The incident X-ray energy was 12.46 keV and sample-detector distance was employed at 1.5 m. SAXS data were acquired using the Rayonix MX-170HS detector with exposure times between 0.01 and 0.03 sec. The measured 2D patterns after normalization by incident flux, sample transmission, and the solid angle were azimuthally averaged to obtain the 1D static scattering profiles as a function of the magnitude of scattering vector, q. Where q is given by, q=(4π sin⁡θ)/λ,  with λ the incident X-ray wavelength (=0.0996 nm) and θ the scattering angle. This gave a q-range of 0.006<q<0.5 Å^(-1). The scattering background in each case was measured using Tris buffer and the normalized background subtracted data is represented by I(q).
description: SASview 4.0
MatLab 2015b
DOI: 10.13145/bacdive2401.20240510.9
title: Prosthecochloris vibrioformis (Pelsh 1936) Imhoff 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-01054
title: Data sets for "Structure and dynamics of aqueous NaCl solutions at high temperatures and pressures"

description: Data sets used to prepare Figures 1-11, 13-16, 18-19, 21-23, 25-26, 28, 30-31, S1-S9 and S12 in the Journal of Chemical Physics article entitled "Structure and dynamics of aqueous NaCl solutions at high temperatures and pressures."  The data sets refer to the structure and dynamics of a solution of 5 molal NaCl in heavy water (D2O).
description: The data sets were collected using the methods described in the published paper.
description: The data sets were analysed using the methods described in the published paper.
description: The figures were prepared using QtGrace (https://sourceforge.net/projects/qtgrace/). The data set corresponding to a plotted curve within an QtGrace file can be identified by clicking on that curve.
description: The files are labelled according to the corresponding figure numbers. The units for each axis are identified on the plots.
DOI: 10.15125/bath-01059
title: Dataset for "#DiabetesOnAPlate: the everyday deployment and contestation of diabetes stigma in an online setting"

description: People living with diabetes report that they are stigmatised and blamed for their condition, and that media are a primary source of stigmatic representations. Our analysis found that, consistent with the notion of diabetes as stigmatised, use of the hashtag #DiabetesOnAPlate on Instagram, was associated with indulgent eating and with posts that signalled recognition of this as a moral transgression. A subsequent on-line survey found that participants who did not have diabetes did not recognise a prototypical #DiabetesOnAPlate post as stigmatic. Whilst some of those with Type 1 and Type 2 diabetes did perceive and contest the stigma, Type 1 participants did so for their group (but not for Type 2); and there was evidence that some Type 2 participants internalised the stigma. These findings support concerns about the everyday, divisive nature of stigmatic representations of diabetes on social network sites, which may compromise health messaging and positive health behaviours.
description: An on-line survey was used to collect the data. The full procedure is explained in the published article.
description: Data has been anonymised.
description: The data is in MS Excel spreadsheet format.
description: Further relevant documentation may be found in the following resources.

   Blackwood, L., Gavin, J., Arnott, E., Barnett, J., Dack, C., and Johansen, J.,  2022.   #DiabetesOnAPlate: the everyday deployment and contestation of diabetes stigma in an online setting.    Critical Public Health, 33(2), 160-173.  Available from: https://doi.org/10.1080/09581596.2022.2077548.
DOI: 10.13145/bacdive2402.20240510.9
title: Prosthecochloris sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-01062
title: Dataset for "Novel super-reduced, pedagogical model for scoping net zero buildings''

description: The dataset corresponds to (1) the ZEBRA tool, (2) its validation and (3) built-in examples. The ZEBRA tool is a novel, super-reduced, pedagogical model for scoping net zero buildings.
The validation is after ASHRAE Standard 140-2017 for space heating demand intensity after HERS Bestest (Judkoff & Neymark 1995). The built-in examples are domestic buildings located in the UK and are described in the PDF files and implemented in ZEBRA.
description: The validation after HERS BESTEST contains a base model for a single zone, single storey building isolated in Colorado (USA). This base model (ID L100A) is then modified in a series of scenarios targetting different building properties, like glazing ratios, insulation levels, or shading conditions (IDs L110A to L324A  and P110A to P150A).

The examples are domestic buildings in the UK built with a desire to deliver a space heating demand better than the average of the national stock. These houses are described with the information that would be typically available early in the design process, following a first sketch of solutions that is meant to be influenced with ZEBRA.
description: The data is stored in plain-text files (either CSV or MD files, encoded in UTF-8) and spreadsheets (xlsx, Microsoft Excel 365, Version 2107 Build 14228.20226).
description: The ZIP file contains a blank version of the ZEBRA tool; a readme file; a folder containing example tasks (as PDF files) and solutions using the ZEBRA tool; and a folder containing a validation suite for the tool.
DOI: 10.13145/bacdive2403.20240510.9
title: Chlorobium limicola Nadson 1906 emend. Imhoff 2003 emend. Hahnke et al. 2016

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-01063
title: Dataset for Fast, high precision autofocus on a motorised microscope: Automating blood sample imaging on the OpenFlexure Microscope

description: Example images and analysis code to support the development and publication of a smart stack procedure to use closed loop movements in an autofocus procedure. Includes examples on how images can be processed and tiled, analysed to find the focal plane, and stacks tested to find the distribution of sharpest images within stacks across a large scan or collection of scans.
description: Standard OpenFlexure optics calibration was performed before collecting images to improve the reliability of movements in x-y, and to improve the lens shading across each image.
description: All images collected on an OpenFlexure Microscope.
The OpenFlexure software version used for this development is archived at https://doi.org/10.5281/zenodo.5541934
Written in Python 3.8.2, with requirements given by requirements.txt
description: Full details of the collection methods, analysis and motivation are included in the associated publication.
DOI: 10.15125/bath-01064
title: Dataset for "Optical activity in third-harmonic Rayleigh scattering: a new route for measuring chirality"

description: This dataset contains results of measurements of third-harmonic Rayleigh scattering in suspensions of silver nanohelices and supporting numerical simulations. The data support the publication "Optical activity in third-harmonic Rayleigh scattering: a new route for measuring chirality".
description: The exact data collection method is described in the related publication.
DOI: 10.13145/bacdive2406.20240510.9
title: Chlorobium luteolum (Schmidle 1901) Imhoff 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2409.20240510.9
title: Chlorobium phaeovibrioides Pfennig 1968 emend. Imhoff 2003

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2414.20240510.9
title: Chlorobium ferrooxidans Heising et al.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-01067
title: Dataset for Continuous Production of Cellulose Microbeads by Rotary Jet Atomization

description: Continuous Production of Cellulose Microbeads by Rotary Jet Atomization. Data which concerns the production of cellulose microbeads using ionic liquids, co-solvents and jet breakup. This data reports on the continuous fabrication of cellulose microbeads in the size range 20-500 μm with narrow size distribution, via rotary jet atomization.  Utilizing Rayleigh breakup as a method of droplet generation, jets of cellulose dissolved in solutions of [EMIm][OAc] and DMSO are expelled from rotating nozzle systems, generating droplets which, when captured in a suitable anti-solvent bath, initiate phase-inversion allowing regeneration of the cellulose into beads. The dataset includes calculations of dimensionless parameters as well as droplet sizes and distributions.
description: This data was gathered using particle size analysis (Mastersizer 3000). Beads were produced using cellulose dissolved in ionic liquids, and subjected to pressure and rotational atomization. Further details may be found in the associated paper.
description: Further relevant documentation may be found in the following resources.

   Callaghan, C., Scott, J. L., Edler, K. J., and Mattia, D.,  2022.   Continuous production of cellulose microbeads by rotary jet atomization.    Journal of Colloid and Interface Science, 627, 1003-1010.  Available from: https://doi.org/10.1016/j.jcis.2022.07.120.
DOI: 10.15125/bath-01069
title: Dataset for "Assessing the immunosuppressive activity of alginate-encapsulated mesenchymal stromal cells on splenocytes"

description: The dataset includes all raw data for the journal article. It includes flow cytometry data (.fcs files) for figures 2 and 4 measuring the splenocyte count in each sample. This gives a measure of the immunosupression of splenocyte proliferation by mesenchymal stromal cells. It also includes PCR data for figure 3 was obtained using StepOne software (ThermoFisher). This dataset shows the effect of alginate encapsulation on MSC immunosuppressive genes. It contains the gene expression levels, as measured through qRT-PCR, on key immunosupressive genes IDO , NOS2, ARG1 and PTGS2 using β-Actin and HPRT-1 as the housekeeping genes. MSC as monolayers on tissue culture plastic or encapsulated within alginate beads were either left untreated or exposed to 10 mg/ml TNF-α, 10 ng/ml INFγ or both (10 ng/ml TNF-α + 10 ng/ml INFγ) for 24h.
description: ETERM_Fig02_DvsTW and ETERM_Fig04_Exp01_03: To determine effect of MSCs on the suppressing the proliferation of splenocytes, the cells were co-cultured for defined periods of time. The splenocytes were stained with the CellTrace™ violet dye and their degree of proliferation measured using flow cytometry. All flow cytometry measurements were performed on a LSRFortessa (BD Biosciences) instrument and data aquisition through the FACSDiva software. Two experimental controls were defined: (1) Splenocytes without any Concanavalin A stimulation (negative control) and (2) splenocytes treated with concanavalin A without any MSCs (positive control). The results were all normalized to the proliferation index (PI) of the positive control. The MSCs were unstained and hence did not interfere with the flow cytometric measurements. During aquisition, the splenocytes were gated in the forwards versus side scatter plot and 10,000 to 100,000 events collected. The .fcs files were then processed using the FlowJo software (BD Biosciences) to gate for single events and finally the histogram for the V450 channel where the CellTracker Violet signal is recorded. The files were saved in the .fcs format and processed using custom-writted R code to calculate the proliferation index. 

ETERM_Fig03_PCR: This folder contains the qPCR data for measuring gene expression. The samples were run on a qPCR machine and data aquired using the StepOne software (ThermoFisher). All information on genes analysed, housekeeping genes used are recorded within the sample dataset.
description: Please refer to the data collection method for information on equipments and softwares used for data collection and processing.
description: The raw data are classified into 3 folders refereing to the figure number in the manuscript. Raw data files and post processed data files (as excel files) are available.
DOI: 10.15125/bath-01070
title: Dataset for: Exercise-induced amplification of mitogen-stimulated oxidative burst in whole blood is strongly influenced by neutrophil counts during and following exercise

description: This dataset provides raw data from a study that characterized the effect of moderate- or vigorous-intensity exercise on leukocyte counts, using fingertip sampling, and mitogen-stimulated oxidative burst, measured in whole blood with a point-of-care test. In a randomized crossover design, 13 healthy adults (mean ± SD age: 22 ± 2 years; seven male, six female) cycled for 30-min, once at 52 ± 5% V̇O2peak and on another occasion at 74 ± 9% V̇O2peak. Blood was sampled at baseline, immediately post-exercise, and 15- and 60-min post-exercise.
description: The methodology for this dataset is contained in the associated paper.
DOI: 10.13145/bacdive2416.20240510.9
title: Roseiflexus castenholzii Hanada et al. 2002 emend. Nouioui et al. 2018

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-01072
title: Dataset for "Fragmentation and Grievances as Fuel for Violent Extremism: The Case of Abu Musa’ab Al-Zarqawi".

description: Data contains statements of Zarqawi between 2003-2006. They are coded via NVivo and the results are presented in an Excel sheet for ease of use and the ability to reproduce the graphs used in the article.
description: Data was downloaded from https://archive.org/details/Abo_mosaab_alzarqawi

Parallel sampling process was used: nodes were not coded more than one time in a single page. Once a certain node was coded, it wasn’t coded again regardless of its repeated occurrence in the relevant page. This approach assumes that the presence of a node in a page is sufficient to consider that the node plays a considerable role in the page’s rhetoric. However, and most importantly, this approach meant that a percentage of how often a certain node is mentioned (relative to the number of pages) can be easily shown. The coding process itself adopted a rather conservative approach; the coded sentence, word, or phrase, should be directly and unequivocally referable to the nodes they are allocated to.
description: Coding was done using NVivo.
DOI: 10.13145/bacdive2417.20240510.9
title: Chloroflexus aurantiacus Pierson and Castenholz 1974 emend. Nouioui et al. 2018

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive2419.20240510.9
title: Chloroflexus aurantiacus Pierson and Castenholz 1974 emend. Nouioui et al. 2018

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-01079
title: Dataset for "Having permission not to remember: Perspectives on interventions for post-traumatic stress disorder in the absence of trauma memory"

description: This dataset supports a study that explored the experiences of people who have had psychological intervention for post-traumatic stress disorder without memories of the trauma event (PwM). Interpretative phenomenological analysis was used to explore the lived experience of nine women with PwM who had sought psychological assessment/therapy. Participants were recruited via social media and completed semi-structured interviews online or via telephone. The dataset consists of the anonymised transcripts of these interviews.
description: This dataset was gathered as part of a qualitative DClinPsy research project. The interview schedule was devised in accordance with IPA (interpretative phenomenological analysis) methodology. Further details may be found in the methodology section of the associated paper.
description: Further relevant documentation may be found in the following resources.

   May, H., Paskell, R., Davies, C., and Hamilton-Giachritsis, C.,  2022.   Having permission not to remember: perspectives on interventions for post-traumatic stress disorder in the absence of trauma memory.    European Journal of Psychotraumatology, 13(1).  Available from: https://doi.org/10.1080/20008198.2022.2055295.
DOI: 10.13145/bacdive2421.20240510.9
title: Chloroflexus aggregans Hanada et al. 1995

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-01080
title: Dataset for: "Solitons near avoided mode crossings in χ⁽²⁾ nanowaveguides"

description: This dataset contains modelled dispersion of effect refractive indices for three guided modes for a particular lithium niobate nanowaveguide structure. Two of these guided modes show a particularly interesting characteristic of an avoided mode crossing which the work in the associated manuscript is based on. Data is also included for the predicted modulation instability gain for continuous wave solutions in the modelled system. Simulation data for modulation instability are also included showing its impact on the spectrum and formation of trains of solitons from an unstable continuous wave solution. This work also contains predictions made for the solitons that exist in this system. We include data for predicted pulse energy as well as mapping these solitons from their plane of existence onto the linear dispersion of the system. XFROG spectrograms are given for an example soliton solution showing their unusual specro-temporal structure as well as line plots of many solitons temporal and spectral domain separately. Finally we include simulations of soliton propagation in this system.
description: Effective refractive index data was modelled using COMSOL Multiphysics (5.3a) combined with self-written code in MATLAB 2020b. Production of all other data is described in the associated publication.
description: The data is organised into folders for each figure and subfigure panel.
The data is given in ".csv" format with each data column labelled with units where appropriate.
DOI: 10.13145/bacdive2424.20240510.9
title: Allochromatium vinosum (Ehrenberg 1838) Imhoff et al. 1998

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15125/bath-01082
title: Dataset for "Intelligent Mechanochemical Design of Amorphous Solid Dispersions"

description: The entire data supports the research publication and can be divided in 3 parts:

1. Training data (Raw PXRD and DSC data and its description of the labelling contained in the Documentation.zip);
2. Excel-files that are the input of the algorithm (Results.xlsx contains reaction outcomes/ Chem.xlsx contains all chemical descriptors for used molecules; both are in the Documentation.zip);
3. Code (Python algorithm that uses the excel-files from the previous point to generate predictive capabilities).
description: The methodology is described in the supporting paper.
description: Further relevant documentation may be found in the following resources.

   Gröls, J. R., and Castro-Dominguez, B.,  2022.   Intelligent Mechanochemical Design of Co-Amorphous Mixtures.    Crystal Growth & Design, 22(5), 2989-2996.  Available from: https://doi.org/10.1021/acs.cgd.1c01442.
DOI: 10.15125/bath-01083
title: Dataset for "The Effect of Crankshaft Phasing and Port Timing Asymmetry on Opposed-Piston Engine Thermal Efficiency"

description: Opposed-piston, two-stroke engines reveal degrees of freedom that make them excellent candidates for next generation, highly efficient internal combustion engines for hybrid electric vehicles and power systems. This dataset contains results from GT-SUITE simulations of an opposed-piston, two-stroke engine that explore the influence of key control and geometrical parameters, specifically crankshaft phasing and intake and exhaust port height-to-stroke ratios, in obtaining best thermal efficiency. The results are generally reported in the form of contours of brake specific fuel consumption (BSFC), as a function of the aforementioned geometrical parameters of interest. This dataset contains folders corresponding to each figure in the corresponding article. Each folder contains the MATLAB code and any data required to generate the figure.
description: This dataset contains results generated by GT-SUITE simulations of an opposed piston two-stroke engine model, as described in the corresponding article (https://doi.org/10.3390/en14206696). That article describes the simulation set-up and the different cases that were simulated to generate these results.
description: The results in the corresponding article (https://doi.org/10.3390/en14206696) are generally reported in the form of contours of brake specific fuel consumption (BSFC), as a function of certain geometrical parameters of interest. This dataset contains folders corresponding to each figure in the corresponding article. Each folder contains the MATLAB code (.m files) and any data (.mat files) required to generate the figure. The interested party can run the MATLAB .m file to generate the corresponding figure.
description: GT-SUITE and MATLAB were used respectively to generate and plot the values contained in the dataset. But only MATLAB is required to regenerate the plots in the corresponding article (https://doi.org/10.3390/en14206696).
description: The data is contained in MATLAB .mat files.
DOI: 10.13145/bacdive2436.20240510.9
title: Allochromatium warmingii (Cohn 1875) Imhoff et al. 1998

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.