cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21223/p3/hkabuv
title: Dataset for: Screening for resistance to late blight in Peruvian wild potato species

description: This data set includes information of late blight severity readings at 3 and 5 days after inoculation under greenhouse conditions, calculated values of Area Under Disease Progress Curve (AUDPC) and Relative Area Under Disease Progress Curve (rAUDPC) from experiments carried out in CIP-Lima during May to November 2018. Vegetal material tested belonged to genotypes from wild potato landraces accessions hold in CIP’s potato germplasm.
DOI: 10.34857/0019467
title: Template xForm xlsx

description: A template xForm xlsx (excel) file to use as a starting point for building your data collection forms
DOI: 10.25345/c5wk4z
title: MassIVE MSV000088522 - Reanalysis of Thermal Proteome Profiling in Zebrafish Reveals Effects of Napabucasin on Retinoic Acid Metabolism in Proteome Discoverer 2.5
title: This is a reanalysis of PXD017419 performed in Proteome Discoverer version 2.5
DOI: 10.6084/m9.figshare.17091974.v1
title: Single-cell physical phenotyping of mechanically dissociated tissue biopsies for fast diagnostic assessment: Fig 3: Physical phenotyping of cells from transfer colitis model

description: This dataset contains measurements of the physical phenotype of mouse cells mechanically dissociated from the mouse colon using a tissue grinder device. The datasets include a control group, i.e. healthy mouse colon and a transfer colitis group; where immunodeficient mice were injected intraperitoneally with CD4+CD25- T cells three weeks prior to extracting and analysing colon cells.<br><br>Measurements were performed using real-time fluorescent deformability cytometry. Fluorescent antibodies used: CD31-PE, CD45-FITC and EpCAM-APC.<br>.zip-contains data acquired during the measurements in 'rtdc' format
DOI: 10.6084/m9.figshare.17091974
title: Single-cell physical phenotyping of mechanically dissociated tissue biopsies for fast diagnostic assessment: Fig 3: Physical phenotyping of cells from transfer colitis model

description: This dataset contains measurements of the physical phenotype of mouse cells mechanically dissociated from the mouse colon using a tissue grinder device. The datasets include a control group, i.e. healthy mouse colon and a transfer colitis group; where immunodeficient mice were injected intraperitoneally with CD4+CD25- T cells three weeks prior to extracting and analysing colon cells.<br><br>Measurements were performed using real-time fluorescent deformability cytometry. Fluorescent antibodies used: CD31-PE, CD45-FITC and EpCAM-APC.<br>.zip-contains data acquired during the measurements in 'rtdc' format
DOI: 10.5281/zenodo.5761931
title: Functional connectomes denoised with various strategies

description: Dataset denoised with the following strategies: https://github.com/SIMEXP/fmriprep-denoise-benchmark/blob/5296d80a9e3b16283b77ec2749259bb63574c5b7/code/benchmark_strategies.json Atlas used: Difumo 128 ROIs Schaefer 7 network 400 ROIs<br> <br> Preprocessing: fMRIPrep LTS 20.2.1 <pre><code class="language-bash">singularity run --cleanenv \ -B $SLURM_TMPDIR:/DATA \ -B /PATH/TO/templateflow:/templateflow \ -B /etc/pki:/etc/pki/ \ -B /PATH/TO/OUTPUT:/OUTPUT \ /PATH/TO/fmriprep-20.2.1lts.sif \ -w /DATA/fmriprep_work \ --participant-label pixar001 \ --bids-filter-file /OUTPUT/bids_filters.json \ --cifti-output 91k \ --use-aroma \ --output-spaces MNI152NLin2009cAsym MNI152NLin6Asym fsaverage5 \ --output-layout bids \ --notrack \ --skip_bids_validation \ --write-graph \ --omp-nthreads 8 \ --nprocs 16 \ --mem_mb 65536 \ --resource-monitor \ /DATA/ds000288 /DATA/ds000288/derivatives/fmriprep participant </code></pre>
DOI: 10.5281/zenodo.5761939
title: Data and R script for "Fear and cultural background drive sexual prejudice in France – A sentiment analysis approach"

description: Data: corpus_integral.csv FEEL_1.csv mauvais.txt neg_hetero_corrected.txt participant_info_used.txt pos_hetero_corrected.txt R script: polarities.R sentiments_discrete.R
DOI: 10.5281/zenodo.5761938
title: Data and R script for "Fear and cultural background drive sexual prejudice in France – A sentiment analysis approach"

description: Data: corpus_integral.csv FEEL_1.csv mauvais.txt neg_hetero_corrected.txt participant_info_used.txt pos_hetero_corrected.txt R script: polarities.R sentiments_discrete.R
DOI: 10.5281/zenodo.5747572
title: FACS data E2 test in vivo Cas9

description: FACS data of Cas9 in vivo test 2.
DOI: 10.5281/zenodo.5747571
title: FACS data E2 test in vivo Cas9

description: FACS data of Cas9 in vivo test 2.
DOI: 10.5517/ccdc.csd.cc1z0ct5
title: CCDC 1817617: Experimental Crystal Structure Determination

description: Related Article: Bishnu Prasad Borah, Jagannath Bhuyan|2018|J.Chem.Sci.(Bangalore,India)|130|117|doi:10.1007/s12039-018-1516-2
DOI: 10.5517/ccdc.csd.cc2734m4
title: CCDC 2058605: Experimental Crystal Structure Determination

description: Related Article: Nurzhan Beksultanova,Zeynep Gözükara,Mihrimah Araz,Merve Bulut,Sıdıka Polat-Çakır,Muhittin Aygün,Özdemir Dogan|2021|Chirality|33|465|doi:10.1002/chir.23320
DOI: 10.6084/m9.figshare.17129624
title: BP audio files

description: Poem declamation: audio files, Praat TextGrid files and codes for subjects.<br>
DOI: 10.6084/m9.figshare.17129624.v2
title: BP audio files

description: Poem declamation: audio files, Praat TextGrid files and codes for subjects.<br>
DOI: 10.6084/m9.figshare.17129624.v1
title: BP audio files

description: Poem declamation: audio files, Praat TextGrid files and codes for subjects.<br>
DOI: 10.6084/m9.figshare.17129264
title: EP audio files

description: Audio files, Praat TG files for poem recited by EP speakers.<br>
DOI: 10.6084/m9.figshare.17129264.v5
title: EP audio files

description: Audio files, Praat TG files for poem recited by EP speakers.<br>
DOI: 10.6084/m9.figshare.17129264.v4
title: EP audio files

description: Poem recited by EP speakers<br>
DOI: 10.15468/jyeauw
title: Attalea blepharopus Mart. (Arecaceae) from Bolivia revisited since Martius

description: This dataset contains the digitized treatments in Plazi based on the original journal article Moraes, Mónica R., Pintaud, Jean-Christophe (2016): Attalea blepharopus Mart. (Arecaceae) from Bolivia revisited since Martius. Candollea 71 (1): 27-32, DOI: 10.15553/c2016v711a6
DOI: 10.34857/0012131
title: ODK Administrator Guide

description: A guide to publishing xForms on CKAN. This includes uploading forms, adding and assigning collaborators, testing, publishing the form and creating links to the datasets.
DOI: 10.6084/m9.figshare.17129870
title: Hospitalized Individuals with COVID-19 in Kano, Nigeria - Interview (English translated version)

description: Management of patients with covid-19 needing hospitalisation is challenging worldwide. However, little or no information has been gathered regarding the experiences of healthcare workers (hcw s) involved in the care of patients with Covid-19 in poorly resourced settings. This study explored the experiences of HCWs managing hospitalised patients with Covid-19 in a treatment centre in Kano, Nigeria. HCWs directly or indirectly involved in managing patients with Covid-19 in one of the two treatment centres in Kano, Nigeria, were sampled based on being information-rich cases. The study participants were interviewed individually via telephone using a semi-structured interview guide. Data collection was stopped when content saturation was attained. Data was analysed using thematic synthesis.<br>
DOI: 10.5281/zenodo.5753295
title: Supplementary Material.

description: Test
DOI: 10.15468/qg2g8n
title: Emerging global novelty in phyllobothriidean tapeworms (Cestoda: Phyllobothriidea) from sharks and skates (Elasmobranchii)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Caira, Janine N., Bueno, Veronica, Jensen, Kirsten (2021): Emerging global novelty in phyllobothriidean tapeworms (Cestoda: Phyllobothriidea) from sharks and skates (Elasmobranchii). Zoological Journal of the Linnean Society 193: 1336-1363, DOI: 10.1093/zoolinnean/zlaa185, URL: https://doi.org/10.1093/zoolinnean/zlaa185
DOI: 10.6084/m9.figshare.17129876
title: Files for discrimination test

description: Pairs of audio files for discrimination test in poem declamation.<br>
DOI: 10.6084/m9.figshare.17129876.v2
title: Files for discrimination test

description: Pairs of audio files for discrimination test in poem declamation.<br>
DOI: 10.6084/m9.figshare.17129876.v1
title: Pairs od files dor discrimination test

description: Pairs of audio files for discrimination test in poem declamation<br>
DOI: 10.5281/zenodo.4487193
title: Web Traffic Dataset

description: A collection of Web (HTTP) requests for the month of November 2009. This is a small sample of the larger click dataset. Source: Generated by applying a Berkeley Packet Filter to a mirror of the traffic passing through the border router of Indiana University. Date range: Nov. 1, 2009 to November 22. 2009 File size: 235M requests; 2.7GB uncompressed
DOI: 10.6084/m9.figshare.17129888
title: Table S1 - DFI (isolated pathogens)

description: Isolated pathogens.
DOI: 10.6084/m9.figshare.17129888.v1
title: Table S1 - DFI (isolated pathogens)

description: Isolated pathogens.
DOI: 10.6084/m9.figshare.17129936.v1
title: Patrick Data 12.04.21.sav

description: This data set contains social media data.
DOI: 10.6084/m9.figshare.17129936
title: Patrick Data 12.04.21.sav

description: This data set contains social media data.
DOI: 10.5281/zenodo.5761990
title: Supplementary Data from "Relative effects of land conversion and land-use intensity on terrestrial vertebrate diversity"

description: These tif-files contain gridded supplementary data produced for the publication " Relative effects of land conversion and land-use intensity on terrestrial vertebrate diversity". 2010_area_incl_fallow_### depict the area of the respective land-use type in km2 in each grid cell. 2010_HANPPharv_pc_### depict the land-use intensity based on intensity indicator 1 of the respective land-use type in proportion of NPPpot in each grid cell.
description: Due to the area and intensity indicator data being subject to publication in an own publication, we restrict access. Please contact the corresponding author at philipp.semenchuk@univie.ac.at if you want to gain access to these data.
DOI: 10.5281/zenodo.5761989
title: Supplementary Data from "Relative effects of land conversion and land-use intensity on terrestrial vertebrate diversity"

description: These tif-files contain gridded supplementary data produced for the publication " Relative effects of land conversion and land-use intensity on terrestrial vertebrate diversity". 2010_area_incl_fallow_### depict the area of the respective land-use type in km2 in each grid cell. 2010_HANPPharv_pc_### depict the land-use intensity based on intensity indicator 1 of the respective land-use type in proportion of NPPpot in each grid cell.
description: Due to the area and intensity indicator data being subject to publication in an own publication, we restrict access. Please contact the corresponding author at philipp.semenchuk@univie.ac.at if you want to gain access to these data.
DOI: 10.5066/p94ete0b
title: Lidar-derived closed depression vector and density raster in karst areas of the Winchester 30 x 60-minute quadrangle

description: The Winchester 30 x 60 minute quadrangle, covering northern Virginia, West Virginia, and Maryland, hosts karsts within carbonate units of Devonian to Cambrian age. Lidar-derived elevation data, acquired between 2011 and 2019, were used to create a mosaic of 1-meter resolution working digital elevation models (DEMs), from which surface depressions were identified using a semi-automated workflow in ArcGIS. Depressions in the automated inventory were systematically checked by a geologist using aerial imagery, lidar-derived imagery, and 3D viewing of the lidar imagery. Distinguishing features, such as modification by human activities or hydrological significance (stream sink, ephemerally ponded, etc.), were noted wherever relevant to a particular depression. Statistics on the geometric morphometry of each depression were calculated, including perimeter, area, depth, length of major and minor elliptical axes, and azimuth of the major axis. Center points were created for each surface depression and were used to create a point density raster. The density raster displays the number of closed depression points per square kilometer.
DOI: 10.5281/zenodo.5761366
title: Marcusenius ussheri SPAdes preassembly

description: .
DOI: 10.5281/zenodo.5761365
title: Marcusenius ussheri SPAdes preassembly

description: .
DOI: 10.5281/zenodo.5762098
title: Physically-Augmented Deep Learning (PADL): Integration of Physical Context for Improved Seismic Event Discrimination

description: Data for the publication <em>Physically-Augmented Deep Learning (PADL): Integration of Physical Context for Improved Seismic Event Discrimination. </em>Submitted to Geophysical Research Letters<em> </em>(peer review in progress).
DOI: 10.5281/zenodo.5762097
title: Physically-Augmented Deep Learning (PADL): Integration of Physical Context for Improved Seismic Event Discrimination

description: Data for the publication <em>Physically-Augmented Deep Learning (PADL): Integration of Physical Context for Improved Seismic Event Discrimination. </em>Submitted to Geophysical Research Letters<em> </em>(peer review in progress).
DOI: 10.25345/c5rs21
title: MassIVE MSV000088523 - Molecular networking Artemisia electrochemistry
title: Analysis of different fractions of Artemisia herba alba extracts for their electrochemical properties
DOI: 10.6084/m9.figshare.17091683
title: Reorganizing the respiratory high dependency unit for pandemics

description: Respiratory high dependency units (RHDUs) set up in European countries in the last decade are based on being a transitional step between the intensive care units (ICUs) and the conventional hospital ward in terms of staffing, level of monitoring, and patients’ severity. In the pre-COVID-19 era, its main use has been the treatment of hypercapnic acute-on-chronic respiratory failure with noninvasive respiratory support, and more recently, for hypoxemic acute respiratory failure. We searched the following databases: MEDLINE, EMBASE, Cochrane Central Register of Controlled Trials, limited to the terms: COVID-19 and RHDU, Respiratory Intermediate care Unit, acute respiratory distress syndrome (ARDS), noninvasive ventilation (NIV), high flow nasal cannula (HFNC), prone position, and monitoring. In this review, we summarize RHDU´s dual purpose: on the one hand, to decrease the number of admissions into ICU, and on the other hand, early discharges of patients from ICU with prolonged admissions due to the need of care or laborious weaning from invasive mechanical ventilation. Although this dual purpose of RHDUs has contributed to decrease the overload of the ICUs during the pandemic, the hundreds of patients admitted in hospitals, with approximately 20%−30% needing critical care, has exceeded the forecasts of many hospitals. It seems clear that a reorganization and optimization of the care of patients with severe COVID-19 is necessary, minimizing admissions to the ICU and facilitating an early discharge. During the pandemic, several hospitals have spontaneously created new RHDUs or extended preexisting RHDUs or up-graded respiratory wards in order to receive less sick patients requiring lower levels of monitoring and nurse-to-patient ratios. This article reviews under a European expert perspective this topic and proposes an adaptation and optimization of the RHDUs to meet the emergent needs caused by the pandemic emphasizing the role of the expert application of noninvasive respiratory therapies in preventing intubation and ICU access.
DOI: 10.6084/m9.figshare.17091683.v1
title: Reorganizing the respiratory high dependency unit for pandemics

description: Respiratory high dependency units (RHDUs) set up in European countries in the last decade are based on being a transitional step between the intensive care units (ICUs) and the conventional hospital ward in terms of staffing, level of monitoring, and patients’ severity. In the pre-COVID-19 era, its main use has been the treatment of hypercapnic acute-on-chronic respiratory failure with noninvasive respiratory support, and more recently, for hypoxemic acute respiratory failure. We searched the following databases: MEDLINE, EMBASE, Cochrane Central Register of Controlled Trials, limited to the terms: COVID-19 and RHDU, Respiratory Intermediate care Unit, acute respiratory distress syndrome (ARDS), noninvasive ventilation (NIV), high flow nasal cannula (HFNC), prone position, and monitoring. In this review, we summarize RHDU´s dual purpose: on the one hand, to decrease the number of admissions into ICU, and on the other hand, early discharges of patients from ICU with prolonged admissions due to the need of care or laborious weaning from invasive mechanical ventilation. Although this dual purpose of RHDUs has contributed to decrease the overload of the ICUs during the pandemic, the hundreds of patients admitted in hospitals, with approximately 20%−30% needing critical care, has exceeded the forecasts of many hospitals. It seems clear that a reorganization and optimization of the care of patients with severe COVID-19 is necessary, minimizing admissions to the ICU and facilitating an early discharge. During the pandemic, several hospitals have spontaneously created new RHDUs or extended preexisting RHDUs or up-graded respiratory wards in order to receive less sick patients requiring lower levels of monitoring and nurse-to-patient ratios. This article reviews under a European expert perspective this topic and proposes an adaptation and optimization of the RHDUs to meet the emergent needs caused by the pandemic emphasizing the role of the expert application of noninvasive respiratory therapies in preventing intubation and ICU access.
DOI: 10.6084/m9.figshare.17130023
title: Asthma and COPD medicines prescription-claims: A time-series analysis of England’s national prescriptions during the COVID-19 pandemic (Jan 2019 to Oct 2020)

description: During the pandemic, there have been disruptions to how patients seek care. To investigate monthly prescription claims for asthma and chronic obstructive pulmonary disease (COPD) medicines during the first UK wave, interrupted time series (ITS) analysis was used. A national cohort of community patients’ data were examined. Descriptive statistics show salbutamol, aminophylline, ipratropium, and theophylline remain below pre-pandemic levels. Montelukast showed pre-pandemic monthly increase (Est. 67,151 doses, P = 0.05, 95% CI: 1011, 133,291), followed by a jump of 1.6 million doses at March , followed by monthly declines (Est. −112,098 doses, P = 0.216, 95% CI: -293,499, 69,303). Before the pandemic, tiotropium, salbutamol, aminophylline, and ipratropium (P = 0.003) show monthly declines but theophylline and beclometasone showed increases. In March , salbutamol (P = 0.033) and ipratropium (P = 0.001) show a significant jump. After March , ipratropium continues with a downward trajectory (P = 0.001), with a generalized negative trend for all other agents. Salbutamol confidence bounds become negative after March 2020. Some brands were unavailable. An ‘unmet’ medical gap is identified. While it is essential to understand the underlying reasons, urgent action needs to be taken to reassess patients and ensure continuity of care. <b>PLAIN LANGUAGE SUMMARIES (PLS)</b> Asthma and chronic obstructive pulmonary disease (COPD) are long-term lung conditions, affecting 6 million & 1.2 million people respectively and causing breathing difficulties. Sufferers are at a higher risk of chest infections including the coronavirus. Regular use of prescribed medication stabilizes these conditions and prevents them from getting worse. It is common to be prescribed a combination of five to eight oral and inhaled medications. We investigated the impact of the pandemic on the dispensing of these specific medicines across England during the first wave. The English Prescribing Dataset was checked from January 2019 to February 2020 (14 months before the pandemic) and March to October 2020 (8 months after its onset). We find that since March 2020, salbutamol, aminophylline, ipratropium, and theophylline have not returned to their pre-pandemic levels. However, for all agents, there is great variability. Further analysis suggests these trends are not reversing, suggesting that people have not been using their medication as anticipated for 8 months, which is concerning. As a consequence of this work, we recommend that doctors specifically call these patients and discuss their health as a matter of urgency, we encourage patients to continue to take their medication. We advise policy changes to waive the NHS prescription levy for asthma and COPD medication and we seek more granular data for further harm quantification. There are several strengths and weaknesses to our analysis, and we need to conduct more studies to ask patients about their experiences.