cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7854395.v1
title: Additional file 5 of A k-mer grammar analysis to uncover maize regulatory architecture

description: Supplementary Tables S4. (XLSX 66 kb)
DOI: 10.6084/m9.figshare.7854383
title: MOESM5 of Avian malaria alters the dynamics of blood feeding in Culex pipiens mosquitoes

description: Additional file 5. Data indicates the blood meal size of blood fed mosquitoes (optical density values).
DOI: 10.6084/m9.figshare.7854389.v1
title: Additional file 4 of A k-mer grammar analysis to uncover maize regulatory architecture

description: Supplementary Tables S3. (XLSX 39 kb)
DOI: 10.6084/m9.figshare.7854374
title: MOESM4 of Avian malaria alters the dynamics of blood feeding in Culex pipiens mosquitoes

description: Additional file 4. Data indicates the time at which uninfected and sporozoite-infected mosquitoes completed their blood meal (replicated on 6 uninfected birds).
DOI: 10.6084/m9.figshare.7854371
title: Additional file 2 of A k-mer grammar analysis to uncover maize regulatory architecture

description: Supplementary Tables S2. (XLSX 78 kb)
DOI: 10.6084/m9.figshare.7854374.v1
title: MOESM4 of Avian malaria alters the dynamics of blood feeding in Culex pipiens mosquitoes

description: Additional file 4. Data indicates the time at which uninfected and sporozoite-infected mosquitoes completed their blood meal (replicated on 6 uninfected birds).
DOI: 10.6084/m9.figshare.7854383.v1
title: MOESM5 of Avian malaria alters the dynamics of blood feeding in Culex pipiens mosquitoes

description: Additional file 5. Data indicates the blood meal size of blood fed mosquitoes (optical density values).
DOI: 10.6084/m9.figshare.7854359
title: Additional file 1 of A k-mer grammar analysis to uncover maize regulatory architecture

description: Supplementary Tables S1. (XLSX 36 kb)
DOI: 10.6084/m9.figshare.7854371.v1
title: Additional file 2 of A k-mer grammar analysis to uncover maize regulatory architecture

description: Supplementary Tables S2. (XLSX 78 kb)
DOI: 10.6084/m9.figshare.7854359.v1
title: Additional file 1 of A k-mer grammar analysis to uncover maize regulatory architecture

description: Supplementary Tables S1. (XLSX 36 kb)
DOI: 10.6084/m9.figshare.7854341
title: Additional file 4: of An epidemiological and molecular study regarding the spread of vancomycin-resistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016

description: Table S1. Inpatient tracking within de hospital. X-axis corresponds to the days of month, starting from April 1st to June 30th. Y-axis corresponds to wards or floors and bed number. Only beds occupied by patients from the outbreak were included for each ward. Patients are represented by numbers from 1 to 16. Background colours represents clonal profiles, as described in Table 2 and Fig. 4. For the first three patients, the clonal profile was not determined, so they are shown in grey colour. Lighter shade of colours corresponds to the period in which the isolate had not yet been identified. Black colour indicates the sampling date from which the first VREfm was confirmed. Darker shade of colours indicates the period after VREfm confirmation. Red colour points out dates in which patients shared a room. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.7854338
title: Additional file 8: of Cardiomyogenic differentiation is fine-tuned by differential mRNA association with polysomes

description: Counts and RPKM values of all mapped genes. (XLSX 30119 kb)
DOI: 10.6084/m9.figshare.7854338.v1
title: Additional file 8: of Cardiomyogenic differentiation is fine-tuned by differential mRNA association with polysomes

description: Counts and RPKM values of all mapped genes. (XLSX 30119 kb)
DOI: 10.6084/m9.figshare.7854341.v1
title: Additional file 4: of An epidemiological and molecular study regarding the spread of vancomycin-resistant Enterococcus faecium in a teaching hospital in Bogotá, Colombia 2016

description: Table S1. Inpatient tracking within de hospital. X-axis corresponds to the days of month, starting from April 1st to June 30th. Y-axis corresponds to wards or floors and bed number. Only beds occupied by patients from the outbreak were included for each ward. Patients are represented by numbers from 1 to 16. Background colours represents clonal profiles, as described in Table 2 and Fig. 4. For the first three patients, the clonal profile was not determined, so they are shown in grey colour. Lighter shade of colours corresponds to the period in which the isolate had not yet been identified. Black colour indicates the sampling date from which the first VREfm was confirmed. Darker shade of colours indicates the period after VREfm confirmation. Red colour points out dates in which patients shared a room. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.7854323
title: Additional file 4: of Importance of details in food descriptions in estimating population nutrient intake distributions

description: The population two days’ average of energy and nutrient intake distributions before and after facets’ deletion at cut-off at 1.00. The population means and percentiles of two days’ average of energy, macro- and micronutrient intake distributions before and after facets’ deletion and percent difference (% D) for the Dutch population aged 7 to 69 years (DNFCS 2007–2010) (n = 3819). (XLSX 72 kb)
DOI: 10.6084/m9.figshare.7854332
title: Additional file 7: of Cardiomyogenic differentiation is fine-tuned by differential mRNA association with polysomes

description: Polysome-bound and ribosome-free RNA-seq data of D0 vs. D15 comparison (FDR
DOI: 10.6084/m9.figshare.7854323.v1
title: Additional file 4: of Importance of details in food descriptions in estimating population nutrient intake distributions

description: The population two days’ average of energy and nutrient intake distributions before and after facets’ deletion at cut-off at 1.00. The population means and percentiles of two days’ average of energy, macro- and micronutrient intake distributions before and after facets’ deletion and percent difference (% D) for the Dutch population aged 7 to 69 years (DNFCS 2007–2010) (n = 3819). (XLSX 72 kb)
DOI: 10.6084/m9.figshare.7854317
title: Additional file 6: of Cardiomyogenic differentiation is fine-tuned by differential mRNA association with polysomes

description: Polysome-bound vs. ribosome-free ratios (FDR
DOI: 10.6084/m9.figshare.7854332.v1
title: Additional file 7: of Cardiomyogenic differentiation is fine-tuned by differential mRNA association with polysomes

description: Polysome-bound and ribosome-free RNA-seq data of D0 vs. D15 comparison (FDR
DOI: 10.6084/m9.figshare.7854308
title: Additional file 5: of Cardiomyogenic differentiation is fine-tuned by differential mRNA association with polysomes

description: Polysome-bound vs. ribosome-free analysis. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.7854311
title: Additional file 3: of Importance of details in food descriptions in estimating population nutrient intake distributions

description: The normalized %IncMSEs of the existing facets in each food group calculated by random forests. The normalized percent increase in mean square error (%IncMSEs) (among energy and thirty-three nutrients) of the existing facets in each food group calculated by random forests using the data from DNFCS 2007–2010. (XLSX 65 kb)
DOI: 10.6084/m9.figshare.7854317.v1
title: Additional file 6: of Cardiomyogenic differentiation is fine-tuned by differential mRNA association with polysomes

description: Polysome-bound vs. ribosome-free ratios (FDR
DOI: 10.6084/m9.figshare.7854302
title: Additional file 2: of Importance of details in food descriptions in estimating population nutrient intake distributions

description: The population two days’ average of energy and nutrient intake distributions before and after facets’ deletion at cut-off at 0.8. The population means and percentiles of two days’ average energy, macro- and micronutrient intake distributions before and after facets’ deletion and percent difference (% D) for the Dutch population aged 7 to 69 years (DNFCS 2007–2010) (n = 3819). (XLSX 62 kb)
DOI: 10.6084/m9.figshare.7854308.v1
title: Additional file 5: of Cardiomyogenic differentiation is fine-tuned by differential mRNA association with polysomes

description: Polysome-bound vs. ribosome-free analysis. (XLSX 41 kb)
DOI: 10.6084/m9.figshare.7854311.v1
title: Additional file 3: of Importance of details in food descriptions in estimating population nutrient intake distributions

description: The normalized %IncMSEs of the existing facets in each food group calculated by random forests. The normalized percent increase in mean square error (%IncMSEs) (among energy and thirty-three nutrients) of the existing facets in each food group calculated by random forests using the data from DNFCS 2007–2010. (XLSX 65 kb)
DOI: 10.6084/m9.figshare.7854296
title: Additional file 4: of Cardiomyogenic differentiation is fine-tuned by differential mRNA association with polysomes

description: Ribosome-free RNA-seq data of comparisons of each sample against the preceding time-point (FDR
DOI: 10.6084/m9.figshare.7854302.v1
title: Additional file 2: of Importance of details in food descriptions in estimating population nutrient intake distributions

description: The population two days’ average of energy and nutrient intake distributions before and after facets’ deletion at cut-off at 0.8. The population means and percentiles of two days’ average energy, macro- and micronutrient intake distributions before and after facets’ deletion and percent difference (% D) for the Dutch population aged 7 to 69 years (DNFCS 2007–2010) (n = 3819). (XLSX 62 kb)
DOI: 10.6084/m9.figshare.7854296.v1
title: Additional file 4: of Cardiomyogenic differentiation is fine-tuned by differential mRNA association with polysomes

description: Ribosome-free RNA-seq data of comparisons of each sample against the preceding time-point (FDR
DOI: 10.6084/m9.figshare.7854287
title: Additional file 3: of Cardiomyogenic differentiation is fine-tuned by differential mRNA association with polysomes

description: Polysome-bound RNA-seq data of comparisons of each sample against the preceding time-point (FDR
DOI: 10.6084/m9.figshare.7854287.v1
title: Additional file 3: of Cardiomyogenic differentiation is fine-tuned by differential mRNA association with polysomes

description: Polysome-bound RNA-seq data of comparisons of each sample against the preceding time-point (FDR
DOI: 10.6084/m9.figshare.7854260
title: Additional file 4: of Evaluation of repositories for sharing individual-participant data from clinical studies

description: Data underlying the results reported in the manuscript. (XLSX 88 kb)
DOI: 10.6084/m9.figshare.7854260.v1
title: Additional file 4: of Evaluation of repositories for sharing individual-participant data from clinical studies

description: Data underlying the results reported in the manuscript. (XLSX 88 kb)
DOI: 10.6084/m9.figshare.7854263
title: of FitEllipsoid: a fast supervised ellipsoid segmentation plugin

description: of FitEllipsoid: a fast supervised ellipsoid segmentation plugin
DOI: 10.6084/m9.figshare.7854251
title: Additional file 8: of Differential expression profiling of Î litR and Î rpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S9. The table lists the differentially expressed genes of Î rpoQ mutant compared to wild-type at HCD. (XLSX 28 kb)
DOI: 10.6084/m9.figshare.7854254
title: Additional file 3: of Evaluation of repositories for sharing individual-participant data from clinical studies

description: List of excluded websites. (ZIP 35 kb)
DOI: 10.6084/m9.figshare.7854263.v2
title: of FitEllipsoid: a fast supervised ellipsoid segmentation plugin

description: of FitEllipsoid: a fast supervised ellipsoid segmentation plugin
DOI: 10.6084/m9.figshare.7854254.v1
title: Additional file 3: of Evaluation of repositories for sharing individual-participant data from clinical studies

description: List of excluded websites. (ZIP 35 kb)
DOI: 10.6084/m9.figshare.7854242
title: Additional file 7: of Differential expression profiling of Î litR and Î rpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S8. The table lists the differentially expressed genes of Î rpoQ mutant compared to wild-type at LCD. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7854245
title: Additional file 2: of Evaluation of repositories for sharing individual-participant data from clinical studies

description: Details on indicator elaboration. (ZIP 35 kb)
DOI: 10.6084/m9.figshare.7854251.v1
title: Additional file 8: of Differential expression profiling of Î litR and Î rpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S9. The table lists the differentially expressed genes of Î rpoQ mutant compared to wild-type at HCD. (XLSX 28 kb)
DOI: 10.6084/m9.figshare.7854263.v1
title: Additional file 1 of FitEllipsoid: a fast supervised ellipsoid segmentation plugin

description: This file contains mathematical facts and proofs regarding our approach, the detailed algorithms, and quantitative 2D and 3D comparisons with other approaches. (ZIP 191 kb)
DOI: 10.6084/m9.figshare.7854242.v1
title: Additional file 7: of Differential expression profiling of Î litR and Î rpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S8. The table lists the differentially expressed genes of Î rpoQ mutant compared to wild-type at LCD. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7854245.v1
title: Additional file 2: of Evaluation of repositories for sharing individual-participant data from clinical studies

description: Details on indicator elaboration. (ZIP 35 kb)
DOI: 10.6084/m9.figshare.7854227
title: Additional file 4: of Differential expression profiling of Î litR and Î rpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S4. The table lists the differentially expressed genes of Î litR mutant compared to wild-type at LCD. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.7854230
title: Additional file 5: of Differential expression profiling of Î litR and Î rpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S5. The table lists the differentially expressed genes of Î litR mutant compared to wild-type at HCD. (XLSX 24 kb)
DOI: 10.6084/m9.figshare.7854218
title: Additional file 2: of Differential expression profiling of Î litR and Î rpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S2. The table lists the differentially expressed genes of A. salmonicida wild-type at HCD compared to LCD. (XLSX 82 kb)
DOI: 10.6084/m9.figshare.7854224
title: Additional file 2: of Correction to: A gene expression assay for simultaneous measurement of microsatellite instability and anti-tumor immune activity

description: Code and data for the validation dataset analyses. The R code and data used in the colorectal and endometrial/neuroendocrine validation analyses are included in this zip file. Code executes in the directory in which it is placed. (ZIP 456â kb)
DOI: 10.6084/m9.figshare.7854218.v1
title: Additional file 2: of Differential expression profiling of Î litR and Î rpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S2. The table lists the differentially expressed genes of A. salmonicida wild-type at HCD compared to LCD. (XLSX 82 kb)
DOI: 10.6084/m9.figshare.7854230.v1
title: Additional file 5: of Differential expression profiling of Î litR and Î rpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S5. The table lists the differentially expressed genes of Î litR mutant compared to wild-type at HCD. (XLSX 24 kb)
DOI: 10.6084/m9.figshare.7854224.v1
title: Additional file 2: of Correction to: A gene expression assay for simultaneous measurement of microsatellite instability and anti-tumor immune activity

description: Code and data for the validation dataset analyses. The R code and data used in the colorectal and endometrial/neuroendocrine validation analyses are included in this zip file. Code executes in the directory in which it is placed. (ZIP 456â kb)
DOI: 10.6084/m9.figshare.7854227.v1
title: Additional file 4: of Differential expression profiling of Î litR and Î rpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S4. The table lists the differentially expressed genes of Î litR mutant compared to wild-type at LCD. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.7854203
title: Additional file 11: of Differential expression profiling of ΔlitR and ΔrpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S12. The table lists the differentially expressed genes of ΔrpoQ compared to ΔlitR at LCD. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.7854209
title: Additional file 12: of Differential expression profiling of ΔlitR and ΔrpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S13. The table lists the differentially expressed genes of ΔrpoQ compared to ΔlitR at HCD. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.7854215
title: Additional file 1: of Differential expression profiling of ΔlitR and ΔrpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S1. The table lists the summary of RNA sequencing data for A. salmonicida LFI1238, ΔlitR and ΔrpoQ. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7854206
title: Additional file 1: of Correction to: A gene expression assay for simultaneous measurement of microsatellite instability and anti-tumor immune activity

description: Code and data for training analysis in TCGA data. The R code and data used in the TCGA analyses are included in this zip file. Code executes in the directory in which it is placed. (ZIP 120895â kb)
DOI: 10.6084/m9.figshare.7854209.v1
title: Additional file 12: of Differential expression profiling of ΔlitR and ΔrpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S13. The table lists the differentially expressed genes of ΔrpoQ compared to ΔlitR at HCD. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.7854206.v1
title: Additional file 1: of Correction to: A gene expression assay for simultaneous measurement of microsatellite instability and anti-tumor immune activity

description: Code and data for training analysis in TCGA data. The R code and data used in the TCGA analyses are included in this zip file. Code executes in the directory in which it is placed. (ZIP 120895â kb)
DOI: 10.6084/m9.figshare.7854215.v1
title: Additional file 1: of Differential expression profiling of ΔlitR and ΔrpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S1. The table lists the summary of RNA sequencing data for A. salmonicida LFI1238, ΔlitR and ΔrpoQ. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7854203.v1
title: Additional file 11: of Differential expression profiling of ΔlitR and ΔrpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida

description: Table S12. The table lists the differentially expressed genes of ΔrpoQ compared to ΔlitR at LCD. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.7853588
title: Clinical characteristics_CACS_GWAS_n=1688

description: Clnical baseline characteristics of the subjects enrolled in the study of coronary artery calcification score with GWAS
DOI: 10.6084/m9.figshare.7853570
title: Dataset for: Exercise during Abstinence Normalizes Ultrastructural Synaptic Plasticity Associated with Nicotine-Seeking following Extended Access Self-Administration

description: Nicotine-craving progressively increases, or incubates, over abstinence following extended access self-administration. While not yet examined for nicotine, the incubation of cocaine-seeking is accompanied by changes in synaptic plasticity in the nucleus accumbens. Here, we determined whether such changes also accompany enhanced nicotine-seeking following extended access self-administration and abstinence, and whether exercise, a potential intervention for nicotine addiction, may exert its efficacy by normalizing these changes. Given that in humans, tobacco/nicotine use begins during adolescence, we used an adolescent-onset model. Nicotine-seeking was assessed in male rats following extended access nicotine or saline self-administration (23-hr/day, 10 days) and 10 days of abstinence, conditions known to induce the incubation of nicotine-seeking, using a within-session extinction/cue-induced reinstatement procedure. A subset of rats had 2-hr/day access to a running wheel during abstinence. Ultrastructural alterations of synapses in the nucleus accumbens core and shell were examined using electron microscopy. Nicotine-seeking was elevated following extended access self-administration and abstinence (in sedentary group), and levels of seeking were associated with an increase in the density of asymmetric (excitatory) and symmetric (inhibitory) synapses onto dendrites in the core, as well as longer asymmetric synapses onto spines, a marker of synaptic potentiation, in both the core and shell. Exercise normalized each of these changes; however, in the shell, exercise and nicotine similarly increased synapse length. Together, these findings indicate an association between nicotine-seeking and synaptic plasticity in the nucleus accumbens, particularly the core, and indicate that the efficacy of exercise to reduce nicotine-seeking may be mediated by reversing these adaptations.
DOI: 10.6084/m9.figshare.7853567
title: MultipleTaxaClusteringPhylumClassOrder

description: Clustering results with multiple phyla, classes and orders of the metazoan mitochondrial gene sequences. <br>