cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.hdumuh
title: Occurrence Download

description: A dataset containing 10208462 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Asparagales)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1981",
 "Geometry POLYGON((-30 25,50 25,50 75,-30 75,-30 25))"
 ]
}

 The dataset includes 10208462 records from 5344 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003238-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ep39c2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio madagascariensis Poir.",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079297-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.15744386
title: RRFS with MGBF-based localization: ICs, LBCs, and observations for EnVar

description: Initial and lateral boundary conditions and (only unrestricted) observations for EnVar (2022092915-2022093000)
DOI: 10.5281/zenodo.15744385
title: RRFS with MGBF-based localization: ICs, LBCs, and observations for EnVar

description: Initial and lateral boundary conditions and (only unrestricted) observations for EnVar (2022092915-2022093000)
DOI: 10.5281/zenodo.15765534
title: scVEDGE - Intermediate and resultant datasets from experiments

description: Intermediate and resultant datasets for scVEDGE are all included. See https://github.com/Lynn-nn-n/scVEDGE/ for scripts of experiments.

Note that mixed_source_adata.h5ad.gz and adata_raw.h5ad.gz are directly obtained from https://zenodo.org/records/5762077 (MultiVI - Intermediate datasets, notebooks, and scripts), to which you can refer if you are looking for detailed scripts of data preprocessing.
DOI: 10.5281/zenodo.15765535
title: scVEDGE - Intermediate and resultant datasets from experiments

description: Intermediate and resultant datasets for scVEDGE are all included. See https://github.com/Lynn-nn-n/scVEDGE/ for scripts of experiments.

Note that mixed_source_adata.h5ad.gz and adata_raw.h5ad.gz are directly obtained from https://zenodo.org/records/5762077 (MultiVI - Intermediate datasets, notebooks, and scripts), to which you can refer if you are looking for detailed scripts of data preprocessing.
DOI: 10.15468/dl.sucune
title: Occurrence Download

description: A dataset containing 328 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Asia",
 "Country is China",
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is CHN.2_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Papilionidae",
 "Year 2020-2025"
 ]
}

 The dataset includes 328 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079299-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s67zze
title: Occurrence Download

description: A dataset containing 217 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio madagascariensis Poir.",
 "Country is Uruguay",
 "HasCoordinate is true"
 ]
}

 The dataset includes 217 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079301-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w6wd3m
title: Occurrence Download

description: A dataset containing 274116 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trollius L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 274116 records from 807 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079283-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4gc3mn
title: Occurrence Download

description: A dataset containing 2916 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "DatasetKey is one of (EOD – eBird Observation Dataset, biodiversity-yellow-river-basin-wetland)",
 "Geometry POLYGON((117.39261 36.32614,119.56083 36.32614,119.56083 38.30348,117.39261 38.30348,117.39261 36.32614))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2010-2024"
 ]
}

 The dataset includes 2916 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079302-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3wu2yu
title: Occurrence Download

description: A dataset containing 328 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Asia",
 "Country is China",
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is CHN.2_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Papilionidae",
 "Year 2020-2025"
 ]
}

 The dataset includes 328 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079304-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j6zv6y
title: Occurrence Download

description: A dataset containing 2398 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio vulgaris L.",
 "Country is Canada",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2398 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079306-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tpdf7j
title: Occurrence Download

description: A dataset containing 144 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio vulgaris L.",
 "Country is Argentina",
 "HasCoordinate is true"
 ]
}

 The dataset includes 144 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079305-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.shm678
title: Occurrence Download

description: A dataset containing 1223 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Senecio vulgaris L.",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1223 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079307-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29434379
title: <b>Divergent Roles of </b><b><i>hcp</i></b><b> Genes in </b><b><i>Salmonella</i></b><b> Typhimurium T6SS Shape Gut Microbiota Dysbiosis during Infection</b>

description: <i>Salmonella enterica </i>subsp.<i> enterica </i>serovar<i> </i>Typhimurium<i> </i>(<i>S. </i>Typhimurium) is a facultative intracellular pathogen causing significant gastrointestinal infections in humans and animals. The type VI secretion system (T6SS) plays a crucial role in its virulence, facilitating competition with host gut microbiota and promoting infection. While <i>S.</i> Typhimurium possesses a single T6SS, it encodes three <i>hcp</i> genes, which are crucial for its functionality and may exhibit non-redundant roles. In this study, we used 16S rRNA sequencing to analyze gut microbiota in BALB/c mice after infection with wild-type (WT) <i>S.</i> Typhimurium or mutant strains (Δ<i>hcp1</i>, Δ<i>hcp2</i>, Δ<i>hcp3</i>). Our findings revealed that <i>S</i>. Typhimurium infection induced severe gut dysbiosis especially on the second day post-infection. Specifically, the infection led to a notable increase in Firmicutes and activated the energy pathways that promotes the breakdown of short chain fatty acids. Wild type <i>S.</i> Typhimurium infection caused a sharp increase in <i>Escherichia-Shigella</i> levels, indicating inflammation-related dysbiosis, while the Δ<i>hcp</i>1, Δ<i>hcp</i>2, and Δ<i>hcp</i>3 groups showed milder changes, suggesting less disruption to gut microbiota. Deletion of individual <i>hcp</i> genes led to distinct bacterial taxa changes, underscoring the non-redundant functions of each <i>hcp</i>. Despite having only one T6SS, <i>S.</i> Typhimurium achieves precise modulation of its functions through the divergent roles of its Hcp proteins, enabling efficient colonization and persistence in the host gut. These findings provide insights into the intricate mechanisms of bacterial adaptation and host-pathogen interactions, offering potential avenues for therapeutic interventions targeting T6SS-mediated dysbiosis.
DOI: 10.6084/m9.figshare.29434379.v1
title: <b>Divergent Roles of </b><b><i>hcp</i></b><b> Genes in </b><b><i>Salmonella</i></b><b> Typhimurium T6SS Shape Gut Microbiota Dysbiosis during Infection</b>

description: <i>Salmonella enterica </i>subsp.<i> enterica </i>serovar<i> </i>Typhimurium<i> </i>(<i>S. </i>Typhimurium) is a facultative intracellular pathogen causing significant gastrointestinal infections in humans and animals. The type VI secretion system (T6SS) plays a crucial role in its virulence, facilitating competition with host gut microbiota and promoting infection. While <i>S.</i> Typhimurium possesses a single T6SS, it encodes three <i>hcp</i> genes, which are crucial for its functionality and may exhibit non-redundant roles. In this study, we used 16S rRNA sequencing to analyze gut microbiota in BALB/c mice after infection with wild-type (WT) <i>S.</i> Typhimurium or mutant strains (Δ<i>hcp1</i>, Δ<i>hcp2</i>, Δ<i>hcp3</i>). Our findings revealed that <i>S</i>. Typhimurium infection induced severe gut dysbiosis especially on the second day post-infection. Specifically, the infection led to a notable increase in Firmicutes and activated the energy pathways that promotes the breakdown of short chain fatty acids. Wild type <i>S.</i> Typhimurium infection caused a sharp increase in <i>Escherichia-Shigella</i> levels, indicating inflammation-related dysbiosis, while the Δ<i>hcp</i>1, Δ<i>hcp</i>2, and Δ<i>hcp</i>3 groups showed milder changes, suggesting less disruption to gut microbiota. Deletion of individual <i>hcp</i> genes led to distinct bacterial taxa changes, underscoring the non-redundant functions of each <i>hcp</i>. Despite having only one T6SS, <i>S.</i> Typhimurium achieves precise modulation of its functions through the divergent roles of its Hcp proteins, enabling efficient colonization and persistence in the host gut. These findings provide insights into the intricate mechanisms of bacterial adaptation and host-pathogen interactions, offering potential avenues for therapeutic interventions targeting T6SS-mediated dysbiosis.
DOI: 10.5281/zenodo.10077409
title: ConeQuest: A Benchmark for Cone Segmentation on Mars

description: We are releasing a novel dataset called ConeQuest, which has been annotated by experts, enabling ML methods to identify cones on Mars. This dataset comprises more than 13k samples from the Isidis Planitia, Acidalia Planitia, and Hypanis regions of the Martian surface. Additionally, we provide metadata for every data sample, such as latitude-longitude, area, and bounding box.

 

To read more about this dataset and how it is prepared, used, or to cite this dataset in your own work, please see the following citation:

Purohit, Mirali, Jacob Adler, and Hannah Kerner. "ConeQuest: A Benchmark for Cone Segmentation on Mars." In Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision, pp. 6026-6035. 2024.

To explore visualizations, data preparation scripts, and related code, visit our GitHub repository:

https://github.com/kerner-lab/ConeQuest
DOI: 10.5281/zenodo.10077410
title: ConeQuest: A Benchmark for Cone Segmentation on Mars

description: We are releasing a novel dataset called ConeQuest, which has been annotated by experts, enabling ML methods to identify cones on Mars. This dataset comprises more than 13k samples from the Isidis Planitia, Acidalia Planitia, and Hypanis regions of the Martian surface. Additionally, we provide metadata for every data sample, such as latitude-longitude, area, and bounding box.

 

To read more about this dataset and how it is prepared, used, or to cite this dataset in your own work, please see the following citation:

Purohit, Mirali, Jacob Adler, and Hannah Kerner. "ConeQuest: A Benchmark for Cone Segmentation on Mars." In Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision, pp. 6026-6035. 2024.

To explore visualizations, data preparation scripts, and related code, visit our GitHub repository:

https://github.com/kerner-lab/ConeQuest
DOI: 10.15468/dl.5sequ7
title: Occurrence Download

description: A dataset containing 118926 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucalyptus globulus Labill.",
 "Country is Spain",
 "HasCoordinate is true"
 ]
}

 The dataset includes 118926 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079292-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m2bftk
title: Occurrence Download

description: A dataset containing 274116 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trollius L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 274116 records from 807 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0079290-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15007397
title: WildFire
DOI: 10.5281/zenodo.15007398
title: WildFire
DOI: 10.15468/dl.xsf7kf
title: Occurrence Download

description: A dataset containing 5287 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Varanus niloticus (Linnaeus, 1766))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5287 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003458-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rk73g2
title: Occurrence Download

description: A dataset containing 2328 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "GadmGid is MEX.25.16_2"
 ]
}

 The dataset includes 2328 records from 108 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003459-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14195121
title: Beaufort Gyre Freshwater Content Change under Greenhouse Warming from an Eddy-resolving Climate Simulation

description: This archive contains data and MATLAB code used to generate figures in the manuscript "Beaufort Gyre Freshwater Content Change under Greenhouse Warming from an Eddy-resolving Climate Simulation".
DOI: 10.5281/zenodo.14195120
title: Beaufort Gyre Liquid Freshwater Content Change under Greenhouse Warming from an Eddy-resolving Climate Simulation

description: This archive contains data and MATLAB code used to generate figures in the manuscript "Beaufort Gyre Liquid Freshwater Content Change under Greenhouse Warming from an Eddy-resolving Climate Simulation".
DOI: 10.5281/zenodo.15008955
title: Beaufort Gyre Liquid Freshwater Content Change under Greenhouse Warming from an Eddy-resolving Climate Simulation

description: This archive contains data and MATLAB code used to generate figures in the manuscript "Beaufort Gyre Liquid Freshwater Content Change under Greenhouse Warming from an Eddy-resolving Climate Simulation".
DOI: 10.5281/zenodo.15008960
title: corresponsabilidad-rioja
DOI: 10.5281/zenodo.15008961
title: corresponsabilidad-rioja
DOI: 10.17632/k7sfchtv83.1
title: SUMO4 promotes SUMO deconjugation required for DNA double-strand break repair Figs and Supp Figs 5-6. Garvin et al.,

description: SUMO4 promotes SUMO deconjugation required for DNA double-strand break repair Figs and Supp Figs 5-6. Garvin et al.,
DOI: 10.17632/9syc9p829m
title: SUMO4 promotes SUMO deconjugation required for DNA double-strand break repair Figs and Supp Figs 6. Garvin et al.,

description: SUMO4 promotes SUMO deconjugation required for DNA double-strand break repair Figs and Supp Figs 6. Garvin et al.,
DOI: 10.17632/9syc9p829m.1
title: SUMO4 promotes SUMO deconjugation required for DNA double-strand break repair Figs and Supp Figs 6. Garvin et al.,

description: SUMO4 promotes SUMO deconjugation required for DNA double-strand break repair Figs and Supp Figs 6. Garvin et al.,
DOI: 10.17632/m2jwdfgczs.1
title: Ramp-and-Hold Relaxation Test Data for Torsion of Ovine Brain Tissue

description: We performed three sets of ramp-and-hold relaxation tests in torsion on freshly slaughtered cylindrical ovine brain samples (25 mm diameter and ~10 mm height) at varying twist rates of {40, 240, 400} rad/m/s while keeping the twist fixed at ~88 rad/m. Each torsion test consisted of two phases: a ramp phase, in which the twist was increased linearly to ~88 rad/m over durations of {2.2, 0.367, 0.22} s, followed by a hold phase lasting 200 s, during which the final value of the twist reached at the end of the ramp phase was maintained. The torque and normal force required to twist the sample during the ramp phase and maintain it in its deformed state during the hold phase were recorded versus time. No pre-conditioning was performed on the samples, and each was tested only once before being discarded. A total of 30 samples were tested over several campaigns: 10 at 40 rad/m/s (S1–S10), 10 at 240 rad/m/s (S11–S20) and 10 at 400 rad/m/s (S21–S30). The tests were conducted using an Anton Paar MCR 302e rotational rheometer with parallel plate geometry. For more details, refer to the associated publication.
DOI: 10.17632/m2jwdfgczs.2
title: Ramp-and-Hold Relaxation Test Data for Torsion of Ovine Brain Tissue

description: We performed three sets of ramp-and-hold relaxation tests in torsion on freshly slaughtered cylindrical ovine brain samples (25 mm diameter and ~10 mm height) at varying twist rates of {40, 240, 400} rad/m/s while keeping the twist fixed at ~88 rad/m. Each torsion test consisted of two phases: a ramp phase, in which the twist was increased linearly to ~88 rad/m over durations of {2.2, 0.367, 0.22} s, followed by a hold phase lasting 200 s, during which the final value of the twist reached at the end of the ramp phase was maintained. The torque and normal force required to twist the sample during the ramp phase and maintain it in its deformed state during the hold phase were recorded versus time. No pre-conditioning was performed on the samples, and each was tested only once before being discarded. A total of 30 samples were tested over several campaigns: 10 at 40 rad/m/s (S1–S10), 10 at 240 rad/m/s (S11–S20) and 10 at 400 rad/m/s (S21–S30). The tests were conducted using an Anton Paar MCR 302e rotational rheometer with parallel plate geometry. For more details, refer to the associated publication.
DOI: 10.17632/h6p8vr6ycz.1
title: Soil and water conservation technology multifunctional evaluation dataset

description: The dataset includes references retrieved by keyword combinations from Web of Science database (core collection)
DOI: 10.17632/ntg2rwcvsd.1
title: Replication package - Barros, Couto, and Gomes - Economic Modelling - 2025

description: Replication files for Barros, Couto, and Gomes (2025), "Revisiting the Welfare Costs of Consumption Fluctuations and Reduced Growth: What Matters Most to Consumers?" (Economic Modelling).
DOI: 10.17632/78xm8vyzbr.1
title: Poliwave light sources can enhance the physical and mechanical properties of a zirconia and diatomite-based composite resin

description: The experimental data related to the tests of degree of conversion, flexural strength, elastic modulus, sorption, and solubility of the composite resins Applic, Opallis, and Zirconfill, polymerized using the Bluephase, Valo, and Demi Plus devices, are presented in the supplementary spreadsheet.

The spreadsheet contains the raw data obtained from each test, allowing for a detailed analysis of the individual results of each tested sample. The degree of conversion values reflect the efficiency of polymerization, while the flexural strength and elastic modulus parameters provide insights into the mechanical performance of the resins. Additionally, the sorption and solubility data indicate the chemical stability of the materials in a humid environment, which is essential for the clinical longevity of dental composites.

These raw data enable the reproducibility of experiments and allow for the performance of additional statistical analyses.
DOI: 10.17632/phnkzry4hv.1
title: Nursing PhD matrix

description: The present matrix compiles detailed information on PhD programs in Nursing at various universities in Latin America, with the aim of analyzing and comparing their key characteristics. This comparison allows for the identification of trends in doctoral education in the discipline, prevailing academic approaches, and differences in curricula based on the country and institution.
DOI: 10.17632/hwmy8whgmk.1
title: List of Article Titles in Marketing Journals January 2019 to December 2020

description: Provides the list of titles of articles published in marketing journals - Journal of the Academy of Marketing Science, Journal of Marketing, Journal of Interactive Marketing, Journal of International Marketing, Journal of Services Marketing from January 2019 to December 2020. The number of article titles with sub-titles, question marks and special characters is also presented.
DOI: 10.6084/m9.figshare.28578080
title: Data for paper "<b>Multiple facets of genetic variation and phenotypic plasticity in drought-adaptive traits for an endemic Mexican pine</b><b>: effects of aridity and temperature"</b>

description: Here, you can find the datasets used in the paper "Multiple Facets of Genetic Variation and Phenotypic Plasticity in Drought-Adaptive Traits for an Endemic Mexican Pine: Effects of Aridity and Temperature." The three documents include the measured morpho-anatomical traits, the climate data from the origin site for each progeny tested, and the phenotypic plasticity values estimated through the Relative Plasticity Distance Index.
DOI: 10.6084/m9.figshare.28578080.v1
title: Data for paper "<b>Multiple facets of genetic variation and phenotypic plasticity in drought-adaptive traits for an endemic Mexican pine</b><b>: effects of aridity and temperature"</b>

description: Here, you can find the datasets used in the paper "Multiple Facets of Genetic Variation and Phenotypic Plasticity in Drought-Adaptive Traits for an Endemic Mexican Pine: Effects of Aridity and Temperature." The three documents include the measured morpho-anatomical traits, the climate data from the origin site for each progeny tested, and the phenotypic plasticity values estimated through the Relative Plasticity Distance Index.