cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28104275
title: Supplementary Material for: Pulmonary Tuberculosis and Risk of Lung Cancer: A Systematic Review and Meta-Analysis

description: Introduction: Lung cancer is a leading cause of cancer-related deaths worldwide, with rising incidence in resource-limited settings. Research suggests an increased risk of lung cancer in individuals with a history of pulmonary tuberculosis (TB), but the association needs further clarification. This systematic review aims to provide a more comprehensive understanding of this relationship.
Methods: We systematically searched the PubMed/Medline, EMBASE, and Scopus databases for relevant studies up to March 15, 2024. The quality of the included studies was assessed using the Joanna Briggs Institute (JBI) critical appraisal checklist. Pooled odds ratios (ORs) with 95% confidence intervals (CIs) were calculated using either random-effects or fixed-effects models, depending on the level of heterogeneity. All statistical analyses were performed using Comprehensive Meta-Analysis software, version 3.0.
Results: A total of 37 studies were included (9 cohort and 28 case-control). A significant association between prior pulmonary TB and lung cancer was found in both cohort (OR: 2.3; 95% CI, 1.4-3.8) and case-control (OR: 1.9; 95% CI, 1.4-2.5) studies. Subgroup analyses revealed a stronger association in East Asia (OR: 2.4; 95% CI, 1.3-4.1). 
Conclusion: Our study provides strong evidence of an increased risk of lung cancer following pulmonary TB. The findings emphasize the need for comprehensive public health strategies, including targeted screening, early detection, and smoking cessation. Future studies should investigate the mechanisms linking TB and lung cancer, as well as the effectiveness of integrated prevention programs, particularly in high-burden regions.
DOI: 10.12686/a21
title: Mars Seismic Catalogue, InSight Mission; V14 2023-04-01

description: The NASA InSight mission installed a single seismic station on the surface of Mars in 2019. The Marsquake Service (MQS) is an official service of the InSight ground services. MQS is tasked with detecting and characterising marsquakes, and curating the catalogue. Waveform data is publicly released on a 3 month schedule. Starting on 2 January, 2020, an updated MQS catalogue is released with each new waveform dataset. This is Data Release 14.
DOI: 10.15468/dl.smx8rb
title: Occurrence Download

description: A dataset containing 981 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Enytus Cameron, 1905"
 ]
}

 The dataset includes 981 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045583-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/7z84-ms87
title: Collatz Automata and Compute Residue Class from Reduced Dynamics by Formular

description: The data set provided source code in C on how to compute Collatz dynamics by automata in terms of residue classes. It also includes algorithms implemented by C codes that can output residue classes by inputting reduced dynamics.  The formular for computing a residue class for a given reduced dynamics is as follows: Function $Invrs(\cdot)$. $Invrs: c \rightarrow rs$ takes as input \\$c=O$ or \\$c=I^{p_1}O^{q_1}I^{p_2}O^{q_2}...I^{p_n}O^{q_n} \in \{I,O\}^{\geq 2},$ $p_i,q_i\in \mathbb{N}^*, i=1,2,...,n, n \in \mathbb{N}^*$\\$CntO(c)=\lceil \log_21.5*CntI(c)\rceil,$ \\$CntO(s)&lt;\lceil \log_21.5*CntI(s)\rceil, s=Substr(c,1,k), k=1,2,...,|c|-1,$ \\and outputs \\$rs=[0]_2$ when $c=O$, or\\$rs=([-\sum_{i=1}^nA_iB_iC_{i-1}]_{2^{|c|}} \cap \{x|x&gt;\Psi*\frac{2^{\sum_{i=1}^n(p_i+q_i)}}{2^{\sum_{i=1}^n(p_i+q_i)}-3^{\sum_{i=1}^np_i}}\})$when $|c|\geq2,$ where $A_i=3^{p_i}-2^{p_i}$,$B_i=(3^{\sum_{j=1}^ip_j})^{-1} \mod C_n$,$C_i=2^{\sum_{j=1}^i(p_j+q_j)}, C_0=1,$\\$\Psi=\prod_{i=2}^na_ib_1+\prod_{i=3}^na_ib_2+...+\prod_{i=n-1}^na_ib_{n-2}+\prod_{i=n}^na_ib_{n-1}+b_n,$\\$a_i=\frac{3^{p_i}}{2^{p_i+q_i}},b_i=\frac{3^{p_i}-2^{p_i}}{2^{p_i+q_i}}.$
DOI: 10.21227/hq8c-x340
title: Reduced Collatz Dynamics for Integers from 3 to 999999

description: The data is reduced Collatz dynamics that is denoted by occurred (3*x+1)/2 represented by "-'' and x/2 represented by "0", during the process from a starting integer to the first integer less than the starting integer. The format is: starting integer, binary representation, the count of (3*x+1)/2, the count of x/2, the reduced dynamics represented by "-'' and "0", the ratio - the count of x/2 over the count of (3*x+1)/2. E.g., 3 11 2 2 1.0000000 --00, 7 111 4 3 0.7500000 ---0-00. The data file presents starting integer from 3 to 999999. As reduced dynamics is "0" for x=0 mod 2 and is "-0" for x=1 mod 4, we only output x=3 mod 4 in the data file.
DOI: 10.21227/qmzw-gn71
title: Exploring the inverse mapping from a dynamics to a residue class - inputting a reduced dynamics or partial dynamics and outputting a residue class

description: We study a reverse problem - given a reduced dynamics or partial dynamics, can we compute a residue class who presents that dynamics.We design a dedicated algorithm that takes as input a dynamics with length t consists of “I” or “O” can output a residue class who present this dynamics in the first t transformations. We thus design computer program that can output a reside class by inputting a reduced dynamics or partial dynamics. That is, inputting c∈{I,O}^L,  CntO(s) ≤ ceil( CntI(s)*lambda), lambda=ln1.5/ln2=0.58469250, s = Substr(c,1,i), i=1,2,..., L. In other words, the dynamics is above of or cutting ratio line in our proposed Collatz graph.Note that, the algorithm is quit lightweight and designed from our formal proof of Partition Theorem - We prove that all natural numbers are partitioned regularly corresponding to ongoing dynamics. Given any natural number x that is i module 2^t (i is an odd integer), the first t transformations in terms of I or O can be determined and identical with the first t transformations of of i. Once current value after t (t is greater or equal to 2) transformations of I or O, is less than x, then reduced dynamics of x is obtained. Otherwise, the residue class of x (namely, i module 2^t) can be partitioned into two halves (namely, i module 2^{t+1} and i+2^t module 2^{t+1}), and either half presents I or O in intermediately forthcoming (t+1)-th transformation.
DOI: 10.25984/1825661
title: Solar-to-Grid Public Data File for Utility-scale (UPV) and Distributed Photovoltaics (DPV) Generation, Capacity Credit, and Value for 2012-2020

description: Lawrence Berkeley National Laboratory (Berkeley Lab) estimates hourly project-level generation data for utility-scale solar projects and hourly county-level generation data for residential and non-residential distributed photovoltaic (PV) systems in the seven organized wholesale markets and 10 additional Balancing Areas. To encourage its broader use, Berkeley Lab has made this data file public here at OEDI, covering the years 2012-2020. The public project-level dataset is updated annually with data from the previous calendar year. For more information about the research project, including a technical report, briefing material, visualizations, and additional data, please visit the project homepage linked in this submission.
DOI: 10.4121/19204863.v1
title: Data underlying the research on 2D postseismic surface deformation after 2016 Meinong earthquake in SW Taiwan

description: We processed multi-temporal images taken by Sentinel-1 satellite via using the persistent scatterer InSAR (PSInSAR) technique. With the constraints of continuous GNSS data, we estimated 2D (E-W and vertical) postseismic deformation rates for 3 years after the 2016 Meinong earthquake. For assessing the stability of public infrastructures, we propose the annual deformation tolerance ration (ADTR) which was converted by the 2D surface displacement velocities.
DOI: 10.5066/f7959gvj
title: Target-Chemical Concentrations, Exposure Activity Ratios, and Bioassay Results for Assessment of Mixed-Organic/Inorganic-Chemical Exposure in USA Tapwater, 2016

description: Chemical and biological concentration results, quality assurance and quality control and statistical summaries from 26 tapwater samples, collected from paired residential and work place sites in 11 states in 2016. Samples were analylzed at U.S. Geological Survey and U.S. Environmental Protection Agency laboratories.
DOI: 10.5066/p9rkzk1e
title: Target-Chemical Concentration Results of Mixed-Organic/Inorganic Chemical Exposures in Cape Cod, Massachusetts Tapwater, 2018

description: This dataset provides the water-quality results for organic and inorganic concentrations analyzed from samples collected at residential tapwater faucets, sourced from private drinking water wells in Cape Cod, Massachusetts. Samples were collected in July and August, 2018 from 20 locations. Samples were analyzed at various U.S. Geological Survey laboratories: the National Water Quality Laboratory in Denver, Colorado for organic compounds; the Redox Chemistry Laboratory in Boulder, Colorado for inorganic constituents; the Organic Geochemistry Laboratory in Lawrence, Kansas for microcystin analyses; and the Organic Chemistry Research Laboratory in Sacramento, California for disinfectant byproduct analyses. Additionally, samples were analyzed for per- and polyfluoroalkyl substances at the Colorado School of Mines in Golden, Colorado.
DOI: 10.5067/atlas/atl08.001
title: ATLAS/ICESat-2 L3A Land and Vegetation Height, Version 1
DOI: 10.5067/k9pcgomq1xp1
title: tavgM_2d_mld_Nx: MERRA Simulated 2D Incremental Analysis Update (IAU) MERRA-Land reanalysis, GEOSldas-MERRALand, Time Average Monthly Mean (2/3x1/2) Version 5.2.0
DOI: 10.5067/modis/myd07_l2.061
title: MYD07_L2 MODIS/Aqua Temperature and Water Vapor Profiles 5-Min L2 Swath 5km
DOI: 10.60520/ieda/113522
title: Compiled geochemistry and PLFA data on fracture waters, biofilms and service waters from Kidd Creek Observatory

description: Dataset containing the intact phospholipid derived phospholipid fatty acid profiles and related stable carbon isotope measurements for samples collected from the Kidd Creek Observatory. Geochemistry of fracture waters and service water is also included. Dataset includes samples from fracture waters, biofilms and service waters collected between 2016 and 2018.
DOI: 10.6073/pasta/31691748ab0fa83430e6a65eeea29337
title: Time-series of high-frequency profiles of fluorescence-based phytoplankton spectral groups in Beaverdam Reservoir, Carvins Cove Reservoir, Falling Creek Reservoir, Gatewood Reservoir, and Spring Hollow Reservoir in southwestern Virginia, USA 2013-2017

description: Depth profiles of fluorescence-based phytoplankton biomass were sampled using a bbe-moldaenke FluoroProbe from 2013 to 2017 in five drinking water reservoirs in southwestern Virginia, USA. These reservoirs are: Beaverdam Reservoir (Vinton, Virginia), Carvins Cove Reservoir (Roanoke, Virginia), Falling Creek Reservoir (Vinton, Virginia), Gatewood Reservoir (Pulaski, Virginia), and Spring Hollow Reservoir (Salem, Virginia). Beaverdam, Carvins Cove, Falling Creek, and Spring Hollow Reservoirs are owned and operated by the Western Virginia Water Authority as primary or secondary drinking water sources for Roanoke, Virginia, and Gatewood Reservoir is a drinking water source for the Town of Pulaski, Virginia. The dataset consists of depth profiles of fluorescence-based phytoplankton biomass measured at the deepest site of each reservoir adjacent to the dam, except in Falling Creek Reservoir, where depth profiles were also taken at four upstream sites ranging from the riverine to the lacustrine zone. Casts were taken approximately weekly from May-October and monthly from November-April.
DOI: 10.6073/pasta/a93f740e3cb55e3e08258520ed2a740b
title: Discharge time series for the primary inflow tributary entering Falling Creek Reservoir, Vinton, Virginia, USA 2013-2017

description: Discharge rates and water temperature of the primary inflow tributary into Falling Creek Reservoir (Vinton, Virginia, USA) were measured at a gauged weir on a 15-minute temporal resolution from 2013 to 2017. Falling Creek Reservoir is a drinking water supply reservoir owned and managed by the Western Virginia Water Authority. The dataset consists of discharge rates calculated from a pressure transducer in the rectangular weir and water temperatures measured at the same site.
DOI: 10.6084/m9.figshare.25249192.v1
title: Effect of PXT on testicular histology

description: Representative photographs showing H&E stained testicular histology.Intact seminiferous epithelium can be appreciated in all the groups. No signs of degeneration or abnormalities were found. G represents germinal cells, S represents spermatids and sperm cells, L represents lumen and SG represents spermatogonial cells
DOI: 10.6084/m9.figshare.28103348
title: Supplementary Material for: High frequency of CTNNB1 variants associated with benign and malignant liver tumors in patients with Congenital Porto-Systemic Shunts

description: Introduction
Patients born with congenital porto-systemic shunts have been shown to have a high risk of benign and malignant liver tumors in otherwise healthy livers. This study aims to evaluate the genetic landscape of tumors in congenital porto-systemic shunts (CPSS) and correlate sequencing data with histological findings and clinical evolution. 

Methods
Nodules from patients with CPSS and sporadic pediatric focal nodular hyperplasia (FNH) or FNH-like nodules were evaluated histologically and sequenced for a panel of 50 genes using Next-Generation Sequencing. 

Results
Thirty-eight nodules from 17 patients with CPSS were histologically classified as hepatoblastomas (n=2), hepatocellular carcinomas (n=4), HNF-1α inactivated hepatocellular adenomas (HCAs) (n=2), -catenin-activated HCAs (n=5), unclassified HCAs (n=9), and FNH-like nodules (n=16). CTNNB1 variants were detected in of 26/38 nodules (68%) across different histological categories (2/2 hepatoblastomas, 4/4 HCCs, 10/16 HCAs, 10/16 FNH-like nodules), but not in sporadic FNH or FNH-like nodules (0/10). Less frequent variants were identified in APOB, GNAS, HNF1A, SERPINA1, MAML2, PTCH1, G6PC, KMT2C, DICER1, AXIN1, IL6ST and the promoter region of TERT. Germline variants were identified in AXIN1, HFE, SERPINA1, and ZNF521. CTNNB1 variants affecting amino acid positions 32 and 33 are more common in malignant tumors. Mutated regions in background non-tumoral liver were identified in 2 patients. Multiple CTNNB1 variants were identified in 6/7 (86%) of patients with multiple nodules, but no intra-tumoral variation was found. 

Discussion
CPSS is strongly associated with nodules containing variants in CTNNB1, irrespective of the histological category. Areas in background liver containing these variants were also identified, and different variants could be identified in individual patients. The high proportion of CTNNB1 variants may explain the higher malignant potential of benign tumors found in CPSS.
DOI: 10.5066/p9g0eeue
title: Nutrient loads to the Gulf of Mexico produced by the USGS National Water Quality Network, 1968-2021
DOI: 10.5066/p9iyt37h
title: Target-Chemical Concentrations, Exposure Activity Ratios, and Bioassay Results for Assessment of Mixed-Organic/Inorganic Chemical Exposures in Northeast Iowa Private-Well Tapwater, 2018

description: In the United States and globally, contaminant exposure in unregulated private-well point-of-use (POU) tapwater (TW) is a recognized public health data gap and an obstacle to both risk management and homeowner decision making. To help address the lack of data on broad contaminant exposures in private-well TW from hydrologically vulnerable (alluvial or karst) aquifers in agriculturally intensive landscapes, samples were collected in 2018-2019 from 47 northeast Iowa farms and analyzed for 437 unique organic compounds, 32 inorganic constituents, 5 in vitro bioassays, and 11 microbial assays.
DOI: 10.5066/p9voobwt
title: Mixed Organic and Inorganic Tapwater Results in the Greater Chicago Area, USA, 2017-2019

description: This data set contains the result for inorganic constituents and organic compounds collected from tapwater locations, as well as water filtration plants, in East Chicago, Indiana, and Chicago, Illinois in 2017. Additionally quality assurance data collected was summarized. Residential samples collected were done so directly from residential kitchen taps (faucets) as is, it was noted if a point-of-use filtration device was utilized by the homeowner, but they were not removed for sampling. Samples were collected at various times of the day, without regard to previous water use. Results were analyzed using ToxCast, and Exposure Activity Ratios (EARs) are presented. Water filtration plant samples were taken from Lake Michigan, and non-regulatory, pre-distributional faucets. Samples were analyzed at the U.S. Geological Survey, National Water Quality Laboratory, Denver, Colorado, Organic Chemistry Laboratory, Sacramento, California, and Organic Geochemistry Laboratory, Lawrence, Kansas. Additionally, per- and polyfluoroalkyl substances were analyzed at the Colorado School of Mines, Golden, Colorado.
DOI: 10.5067/ke1csvxmi95y
title: SMAP/Sentinel-1 L2 Radiometer/Radar 30-Second Scene 3 km EASE-Grid Soil Moisture, Version 2
DOI: 10.5067/modis/mod07_l2.061
title: MODIS/Terra Temperature and Water Vapor Profiles 5-Min L2 Swath 5km
DOI: 10.6084/m9.figshare.28103249
title: Supplementary Material for: Longer term outcomes of laparoscopic peritoneal lavage in the management of acute Hinchey III perforated diverticulitis: A Systematic review and Meta-Analysis

description: Introduction:
To investigate the current evidence regarding long-term outcomes using laparoscopic peritoneal lavage (LPL) versus primary bowel resection (PR) in Hinchey III diverticulitis. 

Methods:
A systematic review was undertaken based upon articles published between 1st January 2000 and 1st March 2024. Databases Pubmed, Scopus and Embase were used employing the key search terms “diverticulitis” and “peritoneal lavage”. Articles were selected according to the PRISMA guidelines and statistical analysis was undertaken. Cumulative analysis of diverticulitis recurrence and secondary outcomes of disease-related mortality, serious adverse events, stoma incidence, re-operation and re-admission rates were performed. 

Results:
An initial search identified 506 articles for review. A total of 294 patients were included for final analysis from 3 prospective randomised controlled trials. There was no significant difference in disease-related mortality or serious adverse events between LPL and PR. There was significantly decreased likelihood of having a stoma in the LPL group however there was also a significantly increased likelihood of having recurrent diverticulitis. There was heterogenicity throughout. 

Conclusion:
There is a paucity of level 1 evidence available regarding the long-term outcomes of Hinchey III diverticulitis managed with LPL. At 3-year follow-up there is a significantly decreased likelihood of having a stoma, tempered by the fact that there is a significantly increased likelihood of having recurrent diverticulitis. Further homogenous high-quality randomised studies are required to clarify whether LPL shows long term benefit.
DOI: 10.21227/fs3z-vc10
title: Verifying whether extremely large integer guarantees Collatz conjecture (can return to 1 finally)

description: Currently, the largest integer being verified for Collatz conjecture is about 2^60 . To verify whether extremely large integers such as 2^{100000}-1 can return 1, we design a new algorithm.  This dedicated algorithm can change numerical computation into bit or charter computation, hence, original dynamics for extremely large integer without upper bound can be computed. By this algorithm, we thus design computer program that can output original dynamics for extremely large integers without upper-bound such as 2^{100000}-1, which is the largest integer being verified until now.  The source code is txpo15.c. The bit length of extremely large integer can be set up by Macro (named MAXLEN) in source code. The program can output the original dynamics (called CODE) of a starting integer in terms of “-” presenting (3*x+1)/2 and “0” presenting x/2. This data can be used for verifying whether extremely large number can go to 1 finally. Note that, there is no upper bound for extremely large starting integer; all is timing issue.
DOI: 10.21227/ge9h-8a77
title: Exploring properties in reduced Collatz dynamics

description: We design a computer program that can output reduced dynamics for odd integers with 4k+3, e.g, [3-99999999]. Outputting (reduced) dynamics for much larger integers are also possible. The source code in C is txpo9.c.  There are 5 options in arguments for more flexible output.  Those data can reveal the properties of reduced dynamics. The most important are ratio and period.
DOI: 10.21227/rxx6-8322
title: Exploring the ratio between the count of x/2 and the count of (3*x+1)/2 in original dynamics for extremely large starting integers asymptotically

description: We design a computer program that can randomly generate extremely large integers and output their original dynamics. The source code is txpo10b.c. The bit length of integers can be defined by Macro (named MAXLEN) in source code. The number of randomly generated integers can be set by inputting argument. The program can output the original dynamics of a starting integer in terms of “-” presenting (3*x+1)/2 and “0” presenting x/2. This data can be used for observing the relation between the count of “-” and the count of “0”. By analyzing outputting data, we discover that the ratio - the count of “-” over the count of “0” - is 1 asymptotically with the grow of starting integer.
DOI: 10.25739/4ext-5e97
title: G2F Maize UAV Data, College Station, Texas 2017

description: In 2017 the maize Genomes to Fields (G2F; https://www.genomes2fields.org/ ) trials in College Station, Texas, were flown using two separate unmanned aerial systems (UAS, i.e. drones) nearly weekly; one UAS was a rotocopter (DJI Phantom 3 Pro with DJI FC300X  12 MP camera)and the other a fixed wing aircraft (Tuffwing UAV Mapper with  24 MP Sony a6000 or MicaSense RedEdge). The College Station 2017 G2F test consisted of 1500 two row plots (250 genotypes x 3 management environments x 2 replicates).
description: Readme; Flight dates file; Master note sheet; Field map and agronomic information; GCP coordinates; Shapefiles; Raw images; Flight data; Mosaics; Point Clouds; Digital surface model (DSM); Image processing report
DOI: 10.5066/f7sq8xkt
title: Plots of Wind Patterns of the World's Volcanoes

description: This product includes rose diagrams and tables of wind patterns at volcanoes listed in the Smithsonian Institution's Volcanoes of the World Database. At each volcano, the speed and direction of wind above the volcano were read from output of the NCEP/NCAR Reanalysis 1 model, at twice-daily intervals from January 1, 1990 to December 28, 2009. These results were then plotted as 20 wind rose diagrams, divided into four seasons and five elevation intervals, and as one summary plot for year-round winds at 0-5 km elevation above sea level. Rose petals indicate the downwind direction of the wind vector. These rose diagrams are wrapped into a single zip file for each volcano. Also included in the zip file are five text files, for elevation intervals (above sea level) of 0-5, 5-11, 11-16, 16-24, and 24-40km, which give wind vectors, twice daily (at 0000 and 1200 UTC) over the 1990-2010 time range. The rose diagrams are accessible through the attached kmz file, which opens in Google Earth, or as hypertext links in the attached html table. In the kmz file, placemarks at each volcano can be opened to reveal the summary wind rose diagram, along with a link to the page containing the other data.
DOI: 10.5067/fqptq4oj22tl
title: MERRA-2 tavgM_2d_int_Nx: 2d,Monthly mean,Time-Averaged,Single-Level,Assimilation,Vertically Integrated Diagnostics V5.12.4