cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34808/r8jv-cz10
title: Mixed germ cell tumor - Male, 30 - Tissue image [227063002631681]

description: This is the histopathological image of TESTIS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 30Clinical description: Tumor of left testis.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: GERM CELL NEOPLASMSDiagnosis: Mixed germ cell tumorResult of the histopathological examination: Mixed germ cell tumor of testis: seminoma, teratoma, embryonal carcinoma, yolk sac tumor. Germ cell neoplasia in situ is present. Spermatic cord, epididymis and rete tesis without neoplasm infiltration.Sample:Material: FFPECollecting method: Surgical specimenTopography: MALE GENITAL ORGANSOrgan: TESTISTissue: Testis, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/dhm2-mm04
title: Carcinoma in situ of cervix uteri - Female, 29 - Tissue image [9220729551202161]

description: This is the histopathological image of CERVIX UTERI tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 29Clinical description: Erosion of the exocervix. HSIL confirmed in biopsy taken during colposcopy.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter II - NeoplasmsDiagnosis: Carcinoma in situ of cervix uteriResult of the histopathological examination: Cervical cone with extensive (covering both lips) glandular ectopy in the epithelization phase, with extensive chronic active inflammation.
Within the parepidermal epithelium of the transformation zone, areas of high-grade dysplasia (HSIL / CIN 3, p16 (+)) can be seen.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: CERVIX UTERITissue: ExocervixType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/7qwm-by53
title: Neoplasm, benign - Female, 40 - Tissue image [5150730018691721]

description: This is the histopathological image of LIVER AND INTRAHEPATIC BILE DUCTS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 40Clinical description: Tumor of the liverGender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: NEOPLASMS, NOSDiagnosis: Neoplasm, benignResult of the histopathological examination: Hepatocellular adenoma.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: LIVER AND INTRAHEPATIC BILE DUCTSTissue: LiverType of staining: positive/HEStaining: Hematoxylin & eosinAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/xhikjf
title: Myodes glareolus - 33026, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1963-08-29, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/ktja-gy89
title: Nodal marginal zone lymphoma - Female, 62 - Tissue image [9090729594401411]

description: This is the histopathological image of UNKNOWN PRIMARY SITE tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 62Clinical description: No clinical data.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: MATURE B-CELL LYMPHOMASDiagnosis: Nodal marginal zone lymphomaResult of the histopathological examination: Nodal marginal zone lymphoma: CD20+, BCL2+, CD3-, CD5-, CD10-, CD23-, CD43-, CD38-, Cyclin D1-, BCL6-, IgD-, CKAE1/AE3-, Ki-67 10%.Sample:Material: FFPECollecting method: Not availableTopography: UNKNOWN PRIMARY SITEOrgan: UNKNOWN PRIMARY SITETissue: Unknown primary siteType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/ta1j-t148
title: Skin, unspecified - Female, 53 - Tissue image [12010630011265571]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 53Clinical description: Skin naevus.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter II - NeoplasmsDiagnosis: Skin, unspecifiedResult of the histopathological examination: Dermatofibroma.
Melanosome staining negative (-).Sample:Material: FFPECollecting method: Surgical specimenTopography: SKINOrgan: SKINTissue: Skin, NOSType of staining: positive/IHCStaining: Not applicableAntibody: MelanosomeTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/matt-fm95
title: B-cell lymphoma, NOS - Unknown, 79 - Tissue image [329073001662131]

description: This is the histopathological image of ACCESSORY SINUSES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 79Clinical description: Tumor of anterior wall of frontal sinuses. Fragment of whiteish tissue measuring 1.4x0.8x0.6 cm.Gender: UnknownDiagnosis:Classification: ICD-O_3.2Classification code: MALIGNANT LYMPHOMAS NOS OR DIFFUSEDiagnosis: B-cell lymphoma, NOSResult of the histopathological examination: Diffuse large B-cell lymphoma (DLBCL, GCB). IHC: CD45(+), CD20(+), Bcl6(+), Bcl2(+), (CD3-), CD10(-), c-myc(-), MUM1(-), CD5(-), CD138(-), VS38c(-), EBV-LMP1(-), DBA44(-), Annexin-A1(-), cyclin D1(+). Ki-67 70%.Sample:Material: FFPECollecting method: Surgical biopsyTopography: RESPIRATORY SYSTEM AND INTRATORACIC ORGANSOrgan: ACCESSORY SINUSESTissue: Frontal sinusType of staining: positive/IHCStaining: Not applicableAntibody: CD 20Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/y0vjwb
title: Myodes glareolus - 72514, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1968-04-05, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/2atr-ke42
title: Neuroendocrine carcinoma, NOS - Male, 60 - Tissue image [8190729597426291]

description: This is the histopathological image of ESOPHAGUS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 60Clinical description: Retrosternal pain. 
CT:10 mm tumor in oesophagus. 
Biopsy: poorly differentiated oesophageal carcinoma.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Neuroendocrine carcinoma, NOSResult of the histopathological examination: Neuroendocrine carcinoma (NEC) G3. Mitotic index: >50 mitoses per 10 HPF, ki-67 95 %. 
Carcinoma cells: SYN+, CHR+, p63-, CK5/6-.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: ESOPHAGUSTissue: Esophagus NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/ad68-m621
title: Fetal death of unspecified cause - Male, 0 - Tissue image [3140630024312461]

description: This is the histopathological image of BRAIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 0Clinical description: Obsolete pregnancyGender: MaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XVI - Certain conditions originating in the perinatal periodDiagnosis: Fetal death of unspecified causeResult of the histopathological examination: In the sections from the right hemisphere of the brain,  visible signs of autolysis, congestion and  slight edema and neuronal hypoxia (red neurons). In the periventricular zone (PVZ) area of hyperemia and a slight hemorrhage.Sample:Material: FFPECollecting method: Autopsy specimenTopography: EYE, BRAIN AND OTHER PARTS OF CENTRAL NERVOUS SYSTEMOrgan: BRAINTissue: CerebrumType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/pbfebn
title: Myodes glareolus - 159103, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1990-05-13, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/2b0q-gf37
title: Other hypertrophic disorders of skin - Female, 42 - Tissue image [814073000172931]

description: This is the histopathological image of VULVA tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 42Clinical description: 1,8 x 1,3 x 1,4 cm polypoid tumor of skin of vulva.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XII - Diseases of the skin and subcutaneous tissueDiagnosis: Other hypertrophic disorders of skinResult of the histopathological examination: FIbroepithelial polyp- hyperplastic epithelium, loose fibrocollagenous stroma, numerous vessels, no adnexa.Sample:Material: FFPECollecting method: Excision of lesionsTopography: FEMALE GENITAL ORGANSOrgan: VULVATissue: Skin of labia majoraType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/hsvc-nj07
title: Carcinoma, metastatic, NOS - Female, 29 - Tissue image [1270630012704671]

description: This is the histopathological image of BRAIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 29Clinical description: History of breast carcinoma and chemotherapy.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: EPITHELIAL NEOPLASMS, NOSDiagnosis: Carcinoma, metastatic, NOSResult of the histopathological examination: Metastasis of breast carcinoma to brain: CK7+, GCDFP15+ in singular cells, mammaglobin+ in some cells, ER +, PR+, CEA-, WT1 + in singular cells, CDX2-, CK20-, Ki-67 50%.Sample:Material: FFPECollecting method: Surgical specimenTopography: EYE, BRAIN AND OTHER PARTS OF CENTRAL NERVOUS SYSTEMOrgan: BRAINTissue: Brain, NOSType of staining: positive/IHCStaining: Not applicableAntibody: CK 20Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/sz9s-w519
title: Endometrioid adenocarcinoma, NOS - Female, 55 - Tissue image [4100730020136471]

description: This is the histopathological image of CORPUS UTERI tissue sample obtained in University of Warmia and Mazury in Olsztyn and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 55Clinical description: Endometrial polyp.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Endometrioid adenocarcinoma, NOSResult of the histopathological examination: Endometrial polyp partially in a necrotic state with atypical endometrial hyperplasia and focal endometrioid adenocarcinoma G-1.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: CORPUS UTERITissue: EndometriumType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: University of Warmia and Mazury in Olsztyn
DOI: 10.48370/ofd/motwbx
title: Myodes glareolus - 14807, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-09-25, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/s88v-ed17
title: SMALL INTESTINE, Ileum - Female, 79 - Tissue image [8200729592214981]

description: This is the histopathological image of SMALL INTESTINE tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 79Clinical description: A tumor of Bauhin valve region  (radial mesenteric surgical margin)Gender: FemaleDiagnosis:Classification: HealthyClassification code: Diagnosis: Result of the histopathological examination: The radial surgical margin of the intestinal mesentery (including the lymph node identified in this region) is free from malignancy.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: SMALL INTESTINETissue: IleumType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/ak0z-a236
title: Hepatocellular carcinoma, NOS - Female, 63 - Tissue image [9230729557263181]

description: This is the histopathological image of LIVER AND INTRAHEPATIC BILE DUCTS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 63Clinical description: 10,5 x 14 x 13 cm tumor of right lobe of liver. Suspicion of HCC.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Hepatocellular carcinoma, NOSResult of the histopathological examination: Hepatocellular carcinoma (HCC): HepPar+, Glypican-, CD34 (+ vessels, capillarization of hepatic sinusoids), srebro+ (highlights thickened hepatocyte plates), Ki-67 20%.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: LIVER AND INTRAHEPATIC BILE DUCTSTissue: LiverType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/rhj1-v870
title: Breast, unspecified - Female, 49 - Tissue image [12050630013037261]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 49Clinical description: Breast tumourGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter II - NeoplasmsDiagnosis: Breast, unspecifiedResult of the histopathological examination: Invasive breast carcinoma (NST) G2. 
Lymphnodes free of metastases.Sample:Material: FFPECollecting method: Surgical specimenTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Lymph node axilla, armType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/pfensj
title: Myodes glareolus - 93951, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1970-10-01, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/rn3y-xg94
title: Fibromatosis-like metaplastic carcinoma - Female, 66 - Tissue image [10130730023087961]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 66Clinical description: Tumor of right breast. Core needle biopsy:: metaplastic breast carcinoma (fibromatosis-like).Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: COMPLEX EPITHELIAL NEOPLASMSDiagnosis: Fibromatosis-like metaplastic carcinomaResult of the histopathological examination: Metaplastic breast carcinoma (fibromatosis-like): CKAE1/AE3+, CK5/6+, p63+, p40+, VIM+, CD31-, CD34-, EMA-, Beta cetenin-, SMA+, Ki-67 10%.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: Upper-inner quadrant of breastType of staining: positive/IHCStaining: Not applicableAntibody: p40Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/mfrf-dp22
title: Acinic cell adenocarcinoma - Female, 39 - Tissue image [1310630013019211]

description: This is the histopathological image of PAROTID GLANID tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 39Clinical description: Tumor of right parotid gland. 22 x 19 mm tumor of right parotid gland on ultrasound. FNAC: carcinoma cells, suspicion of acinic cell carcinoma.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ACINAR CELL NEOPLASMSDiagnosis: Acinic cell adenocarcinomaResult of the histopathological examination: Acinic cell carcinoma: CK7+, DOG1+, S100-, Ki-67 2%.Sample:Material: FFPECollecting method: Surgical specimenTopography: LIP, ORAL CAVITY AND PHARYNXOrgan: PAROTID GLANIDTissue: Parotid glandType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/i1aubi
title: Myodes glareolus - 24659, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1961-05-26, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/8ajq-bd94
title: Malignant neoplasm of breast - Female, 64 - Tissue image [2210630020352631]

description: This is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 64Clinical description: Tumor of the breastGender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter II - NeoplasmsDiagnosis: Malignant neoplasm of breastResult of the histopathological examination: Infiltrating breast carcinoma (NST) partially micropapillary G3.
The periphery of the cancer shows foci of angioinvasion  and cancerisation. IHC: ER+(7/8), PR+(8/8), Ki67 index about 10%, HER2 (+2) status to be verified by ISH. Resection margins are free of cancer.Sample:Material: FFPECollecting method: Surgical specimenTopography: BREASTOrgan: BREASTTissue: Upper-outer quadrant of breastType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/wtr9-7031
title: Signet ring cell adenocarcinoma - Female, 48 - Tissue image [5060730006988781]

description: This is the histopathological image of RETROPERITONEUM AND PERITONEUM tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 48Clinical description: Cancer dissemination in the peritoneal cavityGender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: CYSTIC, MUCINOUS AND SEROUS NEOPLASMSDiagnosis: Signet ring cell adenocarcinomaResult of the histopathological examination: Low-differentiated carcinoma, partially signet ring cell carcinoma, infiltrating the peritoneum.
IHC: (CK AE1 / 3 (+), CK 20 (-), CK 7 (+), CK 5.6 (-), calretinin (-), CD X2 (+), mucicarmin- focal (+)).Sample:Material: FFPECollecting method: Surgical specimenTopography: RETROPERITONEUM AND PERITONEUMOrgan: RETROPERITONEUM AND PERITONEUMTissue: Peritoneum NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk