cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.4121/3601fd87-58d9-4c72-9e25-7c8d18ad4d09
title: Focus group transcripts on targeted energy poverty interventions by social housing providers in France, England, and the Netherlands

description: This dataset contains qualitative transcripts from six focus group discussions conducted with social housing professionals in France, England, and the Netherlands. Participants included financial practitioners, real estate professionals, legal experts, and social workers, providing diverse perspectives on the role of social housing providers (SHPs) in alleviating energy poverty. The discussions explored targeted interventions such as retrofit prioritisation, behavioural energy advice, rent setting, and housing allocation strategies. Additionally, institutional challenges, including data accuracy, regulatory barriers, and conflicting organisational objectives, were identified. The dataset offers rich insights into the feasibility and impact of targeted energy poverty interventions within the distinct institutional and governance contexts of the three countries.
DOI: 10.4121/3601fd87-58d9-4c72-9e25-7c8d18ad4d09.v1
title: Focus group transcripts on targeted energy poverty interventions by social housing providers in France, England, and the Netherlands

description: This dataset contains qualitative transcripts from six focus group discussions conducted with social housing professionals in France, England, and the Netherlands. Participants included financial practitioners, real estate professionals, legal experts, and social workers, providing diverse perspectives on the role of social housing providers (SHPs) in alleviating energy poverty. The discussions explored targeted interventions such as retrofit prioritisation, behavioural energy advice, rent setting, and housing allocation strategies. Additionally, institutional challenges, including data accuracy, regulatory barriers, and conflicting organisational objectives, were identified. The dataset offers rich insights into the feasibility and impact of targeted energy poverty interventions within the distinct institutional and governance contexts of the three countries.
DOI: 10.6084/m9.figshare.c.3660317_d10.v1
title: Additional file 12: Table S13. of Large-scale transcriptome comparison of sunflower genes responsive to Verticillium dahliae

description: All DEGs related to SVW resistance. (XLSX 814Â kb)
DOI: 10.6084/m9.figshare.c.3660359_d3
title: Additional file 1: of Overexpression of PaNAC03, a stress induced NAC gene family transcription factor in Norway spruce leads to reduced flavonol biosynthesis and aberrant embryo development

description: Sequences of primers used in the study. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3660386_d2.v1
title: Additional file 7: Table S4. of Shotgun proteomics of the barley seed proteome

description: List of the barley seed proteins with Uniprot identifiers, peptide counts, sequence coverage, LFQ intensities, MS/MS count. (XLSX 882 kb)
DOI: 10.6084/m9.figshare.c.3660317_d10
title: Additional file 12: Table S13. of Large-scale transcriptome comparison of sunflower genes responsive to Verticillium dahliae

description: All DEGs related to SVW resistance. (XLSX 814Â kb)
DOI: 10.6084/m9.figshare.c.3660386_d2
title: Additional file 7: Table S4. of Shotgun proteomics of the barley seed proteome

description: List of the barley seed proteins with Uniprot identifiers, peptide counts, sequence coverage, LFQ intensities, MS/MS count. (XLSX 882 kb)
DOI: 10.6084/m9.figshare.c.3660317_d11.v1
title: Additional file 6: Table S7. of Large-scale transcriptome comparison of sunflower genes responsive to Verticillium dahliae

description: Genotype-common transcriptional DEGs in RD-VS-SD and D datasets. (XLSX 4694Â kb)
DOI: 10.6084/m9.figshare.c.3660317_d11
title: Additional file 6: Table S7. of Large-scale transcriptome comparison of sunflower genes responsive to Verticillium dahliae

description: Genotype-common transcriptional DEGs in RD-VS-SD and D datasets. (XLSX 4694Â kb)
DOI: 10.6084/m9.figshare.c.3660317_d12.v1
title: Additional file 10: Table S11. of Large-scale transcriptome comparison of sunflower genes responsive to Verticillium dahliae

description: DEGs directly involved in SVW resistance in genotype-specific pattern. (XLSX 59Â kb)
DOI: 10.6084/m9.figshare.c.3660317_d12
title: Additional file 10: Table S11. of Large-scale transcriptome comparison of sunflower genes responsive to Verticillium dahliae

description: DEGs directly involved in SVW resistance in genotype-specific pattern. (XLSX 59Â kb)
DOI: 10.6084/m9.figshare.c.3660359_d5.v1
title: Additional file 3: Figure S2. of Overexpression of PaNAC03, a stress induced NAC gene family transcription factor in Norway spruce leads to reduced flavonol biosynthesis and aberrant embryo development

description: Schematic representation of the PaLAR3A promoter (Genbank accession no. KX574229.1) in black and the PaLAR3B promoter (KX574230.1) in red, the white regions in PaLAR3B promoter corresponds to deletions in the sequence compared to PaLAR3A promoter. The two NAC binding sites (TTTCGT) present in the region unique to the PaLAR3A promoter are indicated in yellow. In the PaLAR3A_mut promoter it is only these two sites which has been mutated in the remainder of the PaLAR3A promoter is intact. (XLSX 69Â kb)
DOI: 10.6084/m9.figshare.c.3660524_d3.v1
title: Additional file 2: of Enumerateblood – an R package to estimate the cellular composition of whole blood from Affymetrix Gene ST gene expression profiles

description: Association of the 600 CpG sites used by minfi's ‘estimateCellCounts’ function with disease status (Table S1), sex (Table S2), or age (Table S3), after adjusting for cellular composition using CBC/Diffs in the RTP cohort. (XLSX 172 kb)
DOI: 10.6084/m9.figshare.c.3660524_d3
title: Additional file 2: of Enumerateblood – an R package to estimate the cellular composition of whole blood from Affymetrix Gene ST gene expression profiles

description: Association of the 600 CpG sites used by minfi's ‘estimateCellCounts’ function with disease status (Table S1), sex (Table S2), or age (Table S3), after adjusting for cellular composition using CBC/Diffs in the RTP cohort. (XLSX 172 kb)
DOI: 10.6084/m9.figshare.c.3661658_d1
title: Additional file 7: of Genotyping-by-sequencing of a melon (Cucumis melo L.) germplasm collection from a secondary center of diversity highlights patterns of genetic variation and genomic features of different gene pools

description: List of highly divergent loci (FST &gt; 0.9) in pairwise comparisons among the subpopulations C, B and I. The name of each locus includes the chromosome, the chromosomal position, and the type of polymorphism (SNV = single nucleotide variation; Ins: single nucleotide insertion; Del: single nucleotide deletion). For SNP loci falling in putative genes sequences, gene ID and functional annotation reported in the Melonomics database ( www.melonomics.net ) are indicated. Loci which define alleles private to one of the subpopulations are highlighted in red. (XLSX 67 kb)
DOI: 10.6084/m9.figshare.c.3661658_d1.v1
title: Additional file 7: of Genotyping-by-sequencing of a melon (Cucumis melo L.) germplasm collection from a secondary center of diversity highlights patterns of genetic variation and genomic features of different gene pools

description: List of highly divergent loci (FST &gt; 0.9) in pairwise comparisons among the subpopulations C, B and I. The name of each locus includes the chromosome, the chromosomal position, and the type of polymorphism (SNV = single nucleotide variation; Ins: single nucleotide insertion; Del: single nucleotide deletion). For SNP loci falling in putative genes sequences, gene ID and functional annotation reported in the Melonomics database ( www.melonomics.net ) are indicated. Loci which define alleles private to one of the subpopulations are highlighted in red. (XLSX 67 kb)
DOI: 10.6084/m9.figshare.c.3661670_d1.v1
title: Additional file 1: of Effectiveness of a serological tool to predict malaria transmission intensity in an elimination setting

description: Correlation of antibodies.xlsx. Scatter-plot of OD values obtained for MSP1/AMA1 for P. vivax and P. falciparum. (XLSX 108Â kb)
DOI: 10.6084/m9.figshare.c.3661670_d1
title: Additional file 1: of Effectiveness of a serological tool to predict malaria transmission intensity in an elimination setting

description: Correlation of antibodies.xlsx. Scatter-plot of OD values obtained for MSP1/AMA1 for P. vivax and P. falciparum. (XLSX 108Â kb)
DOI: 10.6084/m9.figshare.c.3661790_d8.v1
title: Additional file 1: Table S1. of Functional changes in mRNA expression and alternative pre-mRNA splicing associated with the effects of nutrition on apoptosis and spermatogenesis in the adult testis

description: Phenotypic traits of sheep testes used for WGCNA analysis. “H” indicates sheep fed with high diet, “L” indicates sheep fed with low diet. P1 indicates testis weight (g), P2 indicates sperm number per testis, P3 indicates diameter of seminiferous tubule, P4 indicates volume of seminiferous epithelium (x 1012 μm3), P5 indicates change of scrotal circumference (cm) and P6 indicates apoptotic germ cells/tubule. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3661790_d8
title: Additional file 1: Table S1. of Functional changes in mRNA expression and alternative pre-mRNA splicing associated with the effects of nutrition on apoptosis and spermatogenesis in the adult testis

description: Phenotypic traits of sheep testes used for WGCNA analysis. “H” indicates sheep fed with high diet, “L” indicates sheep fed with low diet. P1 indicates testis weight (g), P2 indicates sperm number per testis, P3 indicates diameter of seminiferous tubule, P4 indicates volume of seminiferous epithelium (x 1012 μm3), P5 indicates change of scrotal circumference (cm) and P6 indicates apoptotic germ cells/tubule. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3661823_d2.v1
title: Additional file 2: of Nanoparticle exposure reactivates latent herpesvirus and restores a signature of acute infection

description: Supplementary Material (XLSX 7772Â kb)
DOI: 10.6084/m9.figshare.c.3661823_d2
title: Additional file 2: of Nanoparticle exposure reactivates latent herpesvirus and restores a signature of acute infection

description: Supplementary Material (XLSX 7772Â kb)
DOI: 10.6084/m9.figshare.c.3662759_d2
title: MOESM1 of MS_HistoneDB, a manually curated resource for proteomic analysis of human and mouse histones

description: Additional file 1. FASTA file containing MS_HistoneDB mouse entries in a mouse Swiss-Prot FASTA file.
DOI: 10.6084/m9.figshare.c.3662741_d4.v1
title: Additional file 5: of Swept away: ocean currents and seascape features influence genetic structure across the 18,000 Km Indo-Pacific distribution of a marine invertebrate, the black-lip pearl oyster Pinctada margaritifera

description: Genotypic data. Genotypes of 580 individuals of P. margaritifera at 9,624 selectively neutral genome-wide SNPs are included in a standard STRUCTURE format. (ZIP 2057Â kb)
DOI: 10.6084/m9.figshare.c.3662762_d2.v1
title: Additional file 2: of Discovery of large genomic inversions using long range information

description: Call sets. Call sets generated by Valor, DELLY, LUMPY, and GASVPro using both real data and simulations. (ZIP 72710 kb)
DOI: 10.6084/m9.figshare.c.3662762_d2
title: Additional file 2: of Discovery of large genomic inversions using long range information

description: Call sets. Call sets generated by Valor, DELLY, LUMPY, and GASVPro using both real data and simulations. (ZIP 72710 kb)
DOI: 10.6084/m9.figshare.c.3662741_d4
title: Additional file 5: of Swept away: ocean currents and seascape features influence genetic structure across the 18,000 Km Indo-Pacific distribution of a marine invertebrate, the black-lip pearl oyster Pinctada margaritifera

description: Genotypic data. Genotypes of 580 individuals of P. margaritifera at 9,624 selectively neutral genome-wide SNPs are included in a standard STRUCTURE format. (ZIP 2057Â kb)
DOI: 10.6084/m9.figshare.c.3662756_d3.v1
title: MOESM2 of Long noncoding RNA repertoire in chicken liver and adipose tissue

description: Additional file 2: Table S1. LncRNA transcripts (2412) and lncRNA genes (1670) and their classes according to the FEELnc classification. These lncRNA transcripts and genes are characterized by a good reproducibility of expression in at least one of the two tissues. We provide ID, genomic location, FASTA sequence, length, classification with the closest protein-coding gene and FPKM-UQ mean expression in the liver and adipose tissue. LncRNAs that were also predicted by the CPC method [24] and representing more than 90% of the lncRNAs are indicated in the column CPC.
DOI: 10.6084/m9.figshare.c.3662759_d3.v1
title: MOESM2 of MS_HistoneDB, a manually curated resource for proteomic analysis of human and mouse histones

description: Additional file 2. FASTA file containing MS_HistoneDB human entries in a human Swiss-Prot FASTA file.
DOI: 10.6084/m9.figshare.c.3662741_d5.v1
title: Additional file 4: of Swept away: ocean currents and seascape features influence genetic structure across the 18,000 Km Indo-Pacific distribution of a marine invertebrate, the black-lip pearl oyster Pinctada margaritifera

description: a. Animation of particle dispersal model simulation using 2014 HYCOM data for spawning season 1. Particle seed location colour codes for 11 populations are identical to those described in Fig. 1. b. Animation of particle dispersal model simulation using 2014 HYCOM data for spawning season 2. Particle seed location colour codes for 10 populations are identical to those described in Fig. 1. c. Animation of particle dispersal model simulation using 2015 HYCOM data for spawning season 1. Particle seed location colour codes for 11 populations are identical to those described in Fig. 1. d. Animation of particle dispersal model simulation using 2015 HYCOM data for spawning season 2. Particle seed location colour codes for 10 populations are identical to those described in Fig. 1. (ZIP 13273 kb)
DOI: 10.6084/m9.figshare.c.3662756_d3
title: MOESM2 of Long noncoding RNA repertoire in chicken liver and adipose tissue

description: Additional file 2: Table S1. LncRNA transcripts (2412) and lncRNA genes (1670) and their classes according to the FEELnc classification. These lncRNA transcripts and genes are characterized by a good reproducibility of expression in at least one of the two tissues. We provide ID, genomic location, FASTA sequence, length, classification with the closest protein-coding gene and FPKM-UQ mean expression in the liver and adipose tissue. LncRNAs that were also predicted by the CPC method [24] and representing more than 90% of the lncRNAs are indicated in the column CPC.
DOI: 10.6084/m9.figshare.c.3662741_d5
title: Additional file 4: of Swept away: ocean currents and seascape features influence genetic structure across the 18,000 Km Indo-Pacific distribution of a marine invertebrate, the black-lip pearl oyster Pinctada margaritifera

description: a. Animation of particle dispersal model simulation using 2014 HYCOM data for spawning season 1. Particle seed location colour codes for 11 populations are identical to those described in Fig. 1. b. Animation of particle dispersal model simulation using 2014 HYCOM data for spawning season 2. Particle seed location colour codes for 10 populations are identical to those described in Fig. 1. c. Animation of particle dispersal model simulation using 2015 HYCOM data for spawning season 1. Particle seed location colour codes for 11 populations are identical to those described in Fig. 1. d. Animation of particle dispersal model simulation using 2015 HYCOM data for spawning season 2. Particle seed location colour codes for 10 populations are identical to those described in Fig. 1. (ZIP 13273 kb)
DOI: 10.6084/m9.figshare.c.3662759_d3
title: MOESM2 of MS_HistoneDB, a manually curated resource for proteomic analysis of human and mouse histones

description: Additional file 2. FASTA file containing MS_HistoneDB human entries in a human Swiss-Prot FASTA file.
DOI: 10.6084/m9.figshare.c.3662756_d4.v1
title: MOESM4 of Long noncoding RNA repertoire in chicken liver and adipose tissue

description: Additional file 4: Table S3. Four subsets of adipose- and liver-specific genes for long noncoding and protein-coding genes.
DOI: 10.6084/m9.figshare.c.3662756_d4
title: MOESM4 of Long noncoding RNA repertoire in chicken liver and adipose tissue

description: Additional file 4: Table S3. Four subsets of adipose- and liver-specific genes for long noncoding and protein-coding genes.
DOI: 10.6084/m9.figshare.c.3662759_d4.v1
title: MOESM4 of MS_HistoneDB, a manually curated resource for proteomic analysis of human and mouse histones

description: Additional file 4. MS_HistoneDB mouse entries with links to gene, transcript and protein identifiers.
DOI: 10.6084/m9.figshare.c.3663529_d2.v1
title: Additional file 3: of Phylogenetic analysis of ionotropic L-glutamate receptor genes in the Bilateria, with special notes on Aplysia californica

description: Protein alignments used to create phylogenetic trees. Protein alignments both before and after sequence trimming with trimAl that were used to create each phylogeny, including: full iGluR phylogeny, NMDAR, AMPAR, and kainate receptor trees, and Aplysia only iGluR tree. (ZIP 292 kb)
DOI: 10.6084/m9.figshare.c.3663529_d2
title: Additional file 3: of Phylogenetic analysis of ionotropic L-glutamate receptor genes in the Bilateria, with special notes on Aplysia californica

description: Protein alignments used to create phylogenetic trees. Protein alignments both before and after sequence trimming with trimAl that were used to create each phylogeny, including: full iGluR phylogeny, NMDAR, AMPAR, and kainate receptor trees, and Aplysia only iGluR tree. (ZIP 292 kb)
DOI: 10.6084/m9.figshare.c.3663550_d1.v1
title: Additional file 14: of An internet-based bioinformatics toolkit for plant biosecurity diagnosis and surveillance of viruses and viroids

description: VirFind contigs annotated with hits to viruses were run through the Yabi VSD toolkit pipeline. Top BLASTX hits (Evalueâ  =â  &lt; 1e-5) to a combined plant and virus protein database are reported. VirFind assembled contigs with a top hit to a plant virus are highlighted in green background. (XLSX 59Â kb)
DOI: 10.6084/m9.figshare.c.3665647_d5
title: Additional file 5: of 
                     De novo transcriptome analysis of rose-scented geranium provides insights into the metabolic specificity of terpene and tartaric acid biosynthesis

description: Details of rose-scented geranium transcripts matched with the A. thaliana protein database. (XLSX 2450 kb)
DOI: 10.15468/dl.vxm2th
title: Occurrence Download

description: A dataset containing 26219 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acer negundo L., Robinia pseudoacacia L., Gleditsia triacanthos L., Ailanthus altissima (Mill.) Swingle, Quercus rubra L., Quercus robur L., Acer platanoides L., Betula pendula Roth, Fagus sylvatica L., Fraxinus excelsior L.)",
 "Country is Ukraine"
 ]
}

 The dataset includes 26219 records from 151 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038627-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3665656_d7
title: Additional file 4: Table S2. of Genetic mechanisms of bone digestion and nutrient absorption in the bone-eating worm Osedax japonicus inferred from transcriptome and gene expression analyses

description: List of the root specific transcriptome. (XLSX 61Â kb)
DOI: 10.6084/m9.figshare.c.3665647_d6.v1
title: Additional file 3: of 
                     De novo transcriptome analysis of rose-scented geranium provides insights into the metabolic specificity of terpene and tartaric acid biosynthesis

description: Functional annotation of rose-scented geranium transcripts, putative annotation, and expression. Plant species contributing the annotated contigs in the top-scoring BLASTx hits against the NR protein database. (XLSX 548 kb)
DOI: 10.6084/m9.figshare.c.3665647_d6
title: Additional file 3: of 
                     De novo transcriptome analysis of rose-scented geranium provides insights into the metabolic specificity of terpene and tartaric acid biosynthesis

description: Functional annotation of rose-scented geranium transcripts, putative annotation, and expression. Plant species contributing the annotated contigs in the top-scoring BLASTx hits against the NR protein database. (XLSX 548 kb)
DOI: 10.6084/m9.figshare.c.3665656_d8.v1
title: Additional file 8: Table S5. of Genetic mechanisms of bone digestion and nutrient absorption in the bone-eating worm Osedax japonicus inferred from transcriptome and gene expression analyses

description: Solute carrier (SLC) transporters in the Osedax japonicus transcriptome. (XLSX 31Â kb)
DOI: 10.6084/m9.figshare.c.3665671_d1.v1
title: Additional file 3: of Comparative analysis of the root transcriptomes of cultivated sweetpotato (Ipomoea batatas [L.] Lam) and its wild ancestor (Ipomoea trifida [Kunth] G. Don)

description: Paralogous genes identified in I. batatas (Sp1). (XLSX 16 KB)
DOI: 10.6084/m9.figshare.c.3665671_d1
title: Additional file 3: of Comparative analysis of the root transcriptomes of cultivated sweetpotato (Ipomoea batatas [L.] Lam) and its wild ancestor (Ipomoea trifida [Kunth] G. Don)

description: Paralogous genes identified in I. batatas (Sp1). (XLSX 16 KB)
DOI: 10.6084/m9.figshare.c.3665656_d8
title: Additional file 8: Table S5. of Genetic mechanisms of bone digestion and nutrient absorption in the bone-eating worm Osedax japonicus inferred from transcriptome and gene expression analyses

description: Solute carrier (SLC) transporters in the Osedax japonicus transcriptome. (XLSX 31Â kb)
DOI: 10.6084/m9.figshare.c.3665671_d2.v1
title: Additional file 9: of Comparative analysis of the root transcriptomes of cultivated sweetpotato (Ipomoea batatas [L.] Lam) and its wild ancestor (Ipomoea trifida [Kunth] G. Don)

description: SSRs and primers predicted in I. batatas (Sp1). (XLSX 5.29 MB)
DOI: 10.6084/m9.figshare.c.3665647_d7.v1
title: Additional file 6: of 
                     De novo transcriptome analysis of rose-scented geranium provides insights into the metabolic specificity of terpene and tartaric acid biosynthesis

description: Details of rose-scented geranium transcripts related with the enzymes involved in terpene biosynthesis. (XLSX 1631 kb)
DOI: 10.6084/m9.figshare.c.3665758_d4.v1
title: Additional file 5: of RNA sequencing for global gene expression associated with muscle growth in a single male modern broiler line compared to a foundational Barred Plymouth Rock chicken line

description: List of focus molecules in gene networks and upstream analysis. Gene symbols, full gene name and fold change values were displayed for the illustrations of network and upstream analyses. (XLSX 14 kb)
DOI: 10.15468/dl.ppv8jt
title: Occurrence Download

description: A dataset containing 8271 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Quercus robur L., Quercus rubra L.)",
 "Country is Ukraine"
 ]
}

 The dataset includes 8271 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038628-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3665758_d4
title: Additional file 5: of RNA sequencing for global gene expression associated with muscle growth in a single male modern broiler line compared to a foundational Barred Plymouth Rock chicken line

description: List of focus molecules in gene networks and upstream analysis. Gene symbols, full gene name and fold change values were displayed for the illustrations of network and upstream analyses. (XLSX 14 kb)