cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23708181
title: Beta Repeats Models

description: <br> ● Deep learning-based structure-modelling methods discover novel predicted β-solenoids. ● Structural database screening identifies additional structural neighbours. ● Study uncovers unprecedentedly large and small β-solenoids. ● Models cover the full range of β-solenoid cross-sectional shapes. ● Present a novel β-solenoid coil shape with plausible complexes. ● Predicted structures are linked to possible functions. ● Eukaryotic and prokaryotic adhesins identified.
DOI: 10.20387/bonares-0z00-ac96
title: Soil mineral nitrogen content is increased by soil mesofauna and nematodes – a meta-analysis

description: Using meta-analysis, we quantified effects of soil mesofauna and nematodes on soil mineral nitrogen and investigated the influence of controlling factors. Data were compiled from 21 articles, yielding 428 data points. The dataset contains information on geographical location, soils (soil texture, organic carbon, CN ratio of soils and litter), experimental details (laboratory or field experiment, application of organic material, experimental duration, temperature, replication, initial mineral nitrogen content), organisms (taxonomic group, size class, species, trophic group, abundance), and the effect sizes and variance calculated for each observation.

Research domain: Other

Research question: The main objectives were (1) to estimate the impact of meso- and microfaunal activity on the nitrogen compounds ammonium, nitrate and total mineral nitrogen; (2) to assess whether faunal effects depend on functional characteristics or faunal density; or (3) were modulated by experimental conditions or soil characteristics.
DOI: 10.25345/c5z02zk43
title: MassIVE MSV000092478 - massive_plant_drag_cdf_11comp_07_2023
title: Plant drug. Instrument Shimadzu GCMS-2010. Method Forensic Toxicology.07.2023
DOI: 10.5281/zenodo.7727747
title: Supporting Data Set for Paper "Using GUI Test Videos to Obtain Stakeholders' Feedback"

description: This data set is a supporting material for an accepted paper "Using GUI Test Videos to Obtain Stakeholders’ Feedback" on ICSSP 2023. This dataset consists of Questionnaires of control and experimental groups Questionnaire-Control Group (German).pdf -&gt; Original quetionnaire for control group (in German) Questionnaire-Control Group (translated)-v03.pdf -&gt; Translated quetionnaire for control group (in English) Questionnaire-Experimental Group (German).pdf -&gt; Original quetionnaire for experimental group (in German) Questionnaire-Experimental Group (translated)-v03.pdf -&gt; Translated quetionnaire for experimental group (in English) Survey-Data-v25.ods -&gt; Collected data through questionnaires Calculate-Mann-Whitney-U-Test-v07.ods -&gt; Detailed calculation of Mann Whitney U Test The videos of the ten scenarios in this study are also available on OneDrive https://1drv.ms/f/s!AtqkJ5cB802BoABI7w_Bft9H8Psi?e=upToep , where you can play them directly in browsers.
description: This work is funded by Deutsche Forschungsgemeinschaft (DFG) - Project number 289386339 (ViViUse).
DOI: 10.5281/zenodo.7727748
title: Supporting Data Set for Paper "Using GUI Test Videos to Obtain Stakeholders' Feedback"

description: This data set is a supporting material for an accepted paper "Using GUI Test Videos to Obtain Stakeholders’ Feedback" on ICSSP 2023. This dataset consists of Questionnaires of control and experimental groups Questionnaire-Control Group (German).pdf -&gt; Original quetionnaire for control group (in German) Questionnaire-Control Group (translated)-v03.pdf -&gt; Translated quetionnaire for control group (in English) Questionnaire-Experimental Group (German).pdf -&gt; Original quetionnaire for experimental group (in German) Questionnaire-Experimental Group (translated)-v03.pdf -&gt; Translated quetionnaire for experimental group (in English) Survey-Data-v25.ods -&gt; Collected data through questionnaires Calculate-Mann-Whitney-U-Test-v07.ods -&gt; Detailed calculation of Mann Whitney U Test The videos of the ten scenarios in this study are also available on OneDrive https://1drv.ms/f/s!AtqkJ5cB802BoABI7w_Bft9H8Psi?e=upToep , where you can play them directly in browsers.
description: This work is funded by Deutsche Forschungsgemeinschaft (DFG) - Project number 289386339 (ViViUse).
DOI: 10.4121/2f3d53fd-d4aa-4cad-9757-626cecb785a6
title: Lateral pile group experiments on historic quay wall foundation piles; Data underlying the dissertation: "Amsterdam quays under pressure - Modelling and testing of historic canal walls".

description: To test the lateral response of old timber quay wall foundations, two lateral experiments have been carried out on 3x4 pile groups in Overamstel Amsterdam. In one of the experiments, the piles are loaded axially/vertically by means of a top load. The experiment without top load is labelled F1 and the experiment with top load is labelled F2. The pile group was instrumented to measure pile cap deflections, rotations and pile cap loads. For a selection of piles, in-ground strain measurements along the piles were carried out. For test F1 and F2, the instrumentation is identical. <br>This dataset contains the following:<br>- Pile forces, deflections and cap rotations data (Excel format)- Fibre optic measurments and installation details (Text files and Excel format)<br>
DOI: 10.4121/2f3d53fd-d4aa-4cad-9757-626cecb785a6.v1
title: Lateral pile group experiments on historic quay wall foundation piles; Data underlying the dissertation: "Amsterdam quays under pressure - Modelling and testing of historic canal walls".

description: To test the lateral response of old timber quay wall foundations, two lateral experiments have been carried out on 3x4 pile groups in Overamstel Amsterdam. In one of the experiments, the piles are loaded axially/vertically by means of a top load. The experiment without top load is labelled F1 and the experiment with top load is labelled F2. The pile group was instrumented to measure pile cap deflections, rotations and pile cap loads. For a selection of piles, in-ground strain measurements along the piles were carried out. For test F1 and F2, the instrumentation is identical. <br>This dataset contains the following:<br>- Pile forces, deflections and cap rotations data (Excel format)- Fibre optic measurments and installation details (Text files and Excel format)<br>
DOI: 10.4121/86c74fa5-1bcf-49f0-8396-c14f9a45eeef
title: Four-point-bending experiments on historic quay wall foundation piles; Data underlying the dissertation: "Amsterdam quays under pressure - Modelling and testing of historic canal walls".

description: The dataset has been compiled as part of the dissertation of M.J. Hemel (2023) entitled "Amsterdam quays under pressure - Modelling and testing of historic canal walls".<br>The mechanical properties of existing spruce foundation piles, retrieved from a historic quay wall at Overamstel in Amsterdam, were studied. To better understand the material properties of historic foundation piles in bending, a series of 6 four-point bending experiments were conducted. An adjustable bending test setup was used in which timber piles were bent by hoist and support slings. The forces were adjusted such that the outer fibre stress between the two forces was consistent, leading to a failure at the weakest cross-section. Measurements of the deflections along the piles and force distribution were taken along the pile length during loading. In addition, biological decay in the outer layer of the timber piles, also referred to as ‘soft shell’, was identified with IML micro-drillings. For two piles (pile 5 and 6) Internal strains were measured by gluing fibre optical wires inside the soft shell of the timber piles. <br>This dataset contains the following:<br>- Bending deflections and forces (Excel format)- Fibre optic measurments and installation details (Text files and Excel format)- IML Micro drilling measurements and IML guide(Text Files and PDF)
DOI: 10.4121/86c74fa5-1bcf-49f0-8396-c14f9a45eeef.v1
title: Four-point-bending experiments on historic quay wall foundation piles; Data underlying the dissertation: "Amsterdam quays under pressure - Modelling and testing of historic canal walls".

description: The dataset has been compiled as part of the dissertation of M.J. Hemel (2023) entitled "Amsterdam quays under pressure - Modelling and testing of historic canal walls".<br>The mechanical properties of existing spruce foundation piles, retrieved from a historic quay wall at Overamstel in Amsterdam, were studied. To better understand the material properties of historic foundation piles in bending, a series of 6 four-point bending experiments were conducted. An adjustable bending test setup was used in which timber piles were bent by hoist and support slings. The forces were adjusted such that the outer fibre stress between the two forces was consistent, leading to a failure at the weakest cross-section. Measurements of the deflections along the piles and force distribution were taken along the pile length during loading. In addition, biological decay in the outer layer of the timber piles, also referred to as ‘soft shell’, was identified with IML micro-drillings. For two piles (pile 5 and 6) Internal strains were measured by gluing fibre optical wires inside the soft shell of the timber piles. <br>This dataset contains the following:<br>- Bending deflections and forces (Excel format)- Fibre optic measurments and installation details (Text files and Excel format)- IML Micro drilling measurements and IML guide(Text Files and PDF)
DOI: 10.4121/0e224b88-8d6b-4622-ab2d-c818f0f266e7
title: Proof load experiment on historic quay wall with timber pile foundation; Data underlying the dissertation: "Amsterdam quays under pressure - Modelling and testing of historic canal walls".

description: To test the lateral response of historic quay walls, a quay wall in Amsterdam Overamstel was proof loaded. In total, five experiments were conducted on four quay wall segments, named A, B, C, and D. On segment A two experiments were carried out, first A.I followed by A.II. The segments are 6.5m in width and loaded by a ballast water container with footprint 2.7×x6.0m. The loading increases the soil stress behind the quay wall, initiating a lateral movement of the quay wall towards the water. The quay wall segment was instrumented to measure the cross-sectional motion of the quay wall, including the surrounding soil body, and water pressures in specified layers. <br>This dataset contains the following:<br>- Movement of structural components, container load and soil movement. (Excel formats)
DOI: 10.4121/0e224b88-8d6b-4622-ab2d-c818f0f266e7.v1
title: Proof load experiment on historic quay wall with timber pile foundation; Data underlying the dissertation: "Amsterdam quays under pressure - Modelling and testing of historic canal walls".

description: To test the lateral response of historic quay walls, a quay wall in Amsterdam Overamstel was proof loaded. In total, five experiments were conducted on four quay wall segments, named A, B, C, and D. On segment A two experiments were carried out, first A.I followed by A.II. The segments are 6.5m in width and loaded by a ballast water container with footprint 2.7×x6.0m. The loading increases the soil stress behind the quay wall, initiating a lateral movement of the quay wall towards the water. The quay wall segment was instrumented to measure the cross-sectional motion of the quay wall, including the surrounding soil body, and water pressures in specified layers. <br>This dataset contains the following:<br>- Movement of structural components, container load and soil movement. (Excel formats)
DOI: 10.6084/m9.figshare.23708220.v1
title: smAMPsTK: a toolkit to unravel the smORFome encoding AMPs of plant species

description: The pervasive repertoire of plant molecules with the potential to serve as a substitute for conventional antibiotics has led to obtaining better insights into plant-derived antimicrobial peptides (AMPs). The massive distribution of Small Open Reading Frames (smORFs) throughout eukaryotic genomes with proven extensive biological functions reflects their practicality as antimicrobials. Here, we have developed a pipeline named smAMPsTK to unveil the underlying hidden smORFs encoding AMPs for plant species. By applying this pipeline, we have elicited AMPs of various functional activity of lengths ranging from 5 to 100 aa by employing publicly available transcriptome data of five different angiosperms. Later, we studied the coding potential of AMPs-smORFs, the inclusion of diverse translation initiation start codons, and amino acid frequency. Codon usage study signifies no such codon usage biases for smORFs encoding AMPs. Majorly three start codons are prominent in generating AMPs. The evolutionary and conservational study proclaimed the widespread distribution of AMPs encoding genes throughout the plant kingdom. Domain analysis revealed that nearly all AMPs have chitin-binding ability, establishing their role as antifungal agents. The current study includes a developed methodology to characterize smORFs encoding AMPs, and their implications as antimicrobial, antibacterial, antifungal, or antiviral provided by SVM score and prediction status calculated by machine learning-based prediction models. The pipeline, complete package, and the results derived for five angiosperms are freely available at https://github.com/skbinfo/smAMPsTK. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.23708220
title: smAMPsTK: a toolkit to unravel the smORFome encoding AMPs of plant species

description: The pervasive repertoire of plant molecules with the potential to serve as a substitute for conventional antibiotics has led to obtaining better insights into plant-derived antimicrobial peptides (AMPs). The massive distribution of Small Open Reading Frames (smORFs) throughout eukaryotic genomes with proven extensive biological functions reflects their practicality as antimicrobials. Here, we have developed a pipeline named smAMPsTK to unveil the underlying hidden smORFs encoding AMPs for plant species. By applying this pipeline, we have elicited AMPs of various functional activity of lengths ranging from 5 to 100 aa by employing publicly available transcriptome data of five different angiosperms. Later, we studied the coding potential of AMPs-smORFs, the inclusion of diverse translation initiation start codons, and amino acid frequency. Codon usage study signifies no such codon usage biases for smORFs encoding AMPs. Majorly three start codons are prominent in generating AMPs. The evolutionary and conservational study proclaimed the widespread distribution of AMPs encoding genes throughout the plant kingdom. Domain analysis revealed that nearly all AMPs have chitin-binding ability, establishing their role as antifungal agents. The current study includes a developed methodology to characterize smORFs encoding AMPs, and their implications as antimicrobial, antibacterial, antifungal, or antiviral provided by SVM score and prediction status calculated by machine learning-based prediction models. The pipeline, complete package, and the results derived for five angiosperms are freely available at https://github.com/skbinfo/smAMPsTK. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.23708211
title: Specefication Table.docx

description: Desktop computer Specification
DOI: 10.6084/m9.figshare.23708211.v1
title: Specefication Table.docx

description: Desktop computer Specification
DOI: 10.57841/casdc.0001644
title: 广东植物志电子版
DOI: 10.6084/m9.figshare.23660281
title: continuumDescriptionOfBucklingSpheresSUPPLEMENTAL.nb from A continuum description of the buckling of a line of spheres in a transverse harmonic confining potential

description: Mathematica file
DOI: 10.6084/m9.figshare.23660281.v2
title: continuumDescriptionOfBucklingSpheresSUPPLEMENTAL.nb from A continuum description of the buckling of a line of spheres in a transverse harmonic confining potential

description: Mathematica file
DOI: 10.6084/m9.figshare.23702667
title: 数据表.csv

description: This study is aim to investigate the latitudinal patterns of ecosystem multifunctionality (EMF) and how microbial traits influence EMF along a latitudinal gradient
DOI: 10.6084/m9.figshare.23702667.v2
title: 数据表.csv

description: This study is aim to investigate the latitudinal patterns of ecosystem multifunctionality (EMF) and how microbial traits influence EMF along a latitudinal gradient
DOI: 10.6084/m9.figshare.23702667.v1
title: 数据表.csv

description: This study is aim to investigate the latitudinal patterns of ecosystem multifunctionality (EMF) and how microbial traits influence EMF along a latitudinal gradient
DOI: 10.5517/cctfkrj
title: CCDC 757818: Experimental Crystal Structure Determination

description: Related Article: V.M.Mazur, N.M.Kolyadina, V.I.Sokol, Siaka Soro, V.S.Sergienko, V.V.Davydov|2010|Koord.Khim.|36|849|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3886/e192841
title: team resilience

description: A study of team resilience
DOI: 10.3886/e192841v1
title: team resilience

description: A study of team resilience
DOI: 10.5519/qd.tl7hzkri
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3250404 records)
DOI: 10.14457/tu.the.2022.191
title: Sick building syndrome in a university hospital in Thailand

description: This study investigated prevalence of sick building syndrome (SBS) and the relationship between occupant characteristics, work conditions, psychosocial factors, personality types, indoor air quality (IAQ), and SBS symptoms among back office workers at a Thai university hospital. It also explored independent variables from August to October 2020. Back office workers from 17 different departments were randomly selected as 165 samples. Participants completed questionnaires on work sensation and sick building syndrome symptom as well as personality type, providing data on occupant characteristics, work conditions, and psychosocial factors. Ten parameters of IAQ samples were collected by air sampler. The result was 80% of participants that showed the prevalence of SBS symptoms. The highest prevalence (68.5%) was of less specific symptoms, while 41.8% of samples suffered from skin symptoms, with 40.6% suffering from eye and nose symptoms. The lowest prevalence (26.7%) was of throat symptoms. Three factors statistically associated with SBS were neuroticism (AOR=4.40, 95% CI=1.65-11.74), visual display terminal (AOR=3.42, 95% CI=1.10-10.61) and allergy history (AOR=2.83, 95% CI=1.05-7.59). Temperature, relative humidity, formaldehyde, bacteria, and carbon dioxide (CO2) did not meet Singapore Standard. SS 554: 2009 in some back office rooms. Therefore, administrators may resolve the SBS problem through direct risk factors by an organizational action plan to achieve good indoor air quality and benefit from increased productivity.
DOI: 10.5281/zenodo.8162678
title: EPIC Aff: A multi-label segmentation visual affordances dataset.

description: This is the EPIC-Aff dataset introduced on the ICCV 2023 paper "Multi-label affordance mapping from egocentric vision".
DOI: 10.5281/zenodo.8162677
title: EPIC Aff: A multi-label segmentation visual affordances dataset.

description: This is the EPIC-Aff dataset introduced on the ICCV 2023 paper "Multi-label affordance mapping from egocentric vision".
DOI: 10.48493/djwf-re80
title: Swabian Jura and Hegau Jura
DOI: 10.6084/m9.figshare.23708337
title: Understory bamboo removal impacts on woody seedlings regeneration in forest ecosystems: a meta-analysis

description: Tree seedling regeneration in forests is often hindered by the negative impact of dense understory bamboo competition. While localized studies have investigated the ecological effects of understory bamboo removal on tree seedlings, but a comprehensive analysis at a global scale is lacking. In this meta-analysis, data from 32 experimental studies were synthesized to assess the overall effect of understory bamboo removal on tree seedling regeneration and identify key influencing factors. Our findings demonstrated positive effects of understory bamboo removal on tree seedling survival, emergence, and height growth. However, we found the response of tree seedlings to bamboo removal varied depending on regeneration characteristics, forest types, and bamboo removal method. Specifically, understory bamboo removal increased the survival rate of deciduous seedlings but did no significantly affect survival rate of evergreen seedlings. Regarding regeneration stages, bamboo removal had a significant positive effect on the survival rate of saplings but not on seedlings. In terms of forest types, bamboo removal significantly increased the emergence density of seedlings in deciduous broadleaf forest, while it had a significant negative influence in evergreen forest and mixed evergreen-deciduous forest. Additionally, the method of bamboo removal was crucial, with seedlings in areas where bamboo was naturally removed showing more robust and favorable responses compared to those where bamboo removal was artificially or animally induced. Furthermore, we found that the duration of bamboo removal and environmental factors such as mean annual temperature, precipitation of seasonality, and soil pH strongly influenced the response ratios of tree seedling regeneration. Our findings provide valuable insights into the ecological implications of understory bamboo removal on tree seedlings regeneration and provide guidance for forest managers in their decision-making processes. These findings can assist forest managers in effectively managing understory bamboo, thereby promoting forest succession and biodiversity conservation.