cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/cycvs-bvc64
title: Hyphomonas session6 27.5KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2008-12-09</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -8.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media...</p>
<strong>Sample Preparation:</strong> C-flat grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-12-09-85/rawdata/</p>08dec09a_unk1c_091.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-12-09-85/rawdata/08dec09a_unk1c_091.mrc"
        > <i class="download icon"></i> Download </a></p>

        08dec09a_unk1c_091_1k.rec,  Reconstruction (Pixel Size 1.548 nm), 118.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-12-09-85/3dimage_5631/08dec09a_unk1c_091_1k.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/rm7pw-khc75
title: Vibrio Yi-Wei style

description: Strain MKW1383 grown in conditions Yi-Wei uses for Bdellovibrio predation
description: <strong>Tilt Series Date:</strong> 2014-02-21</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown 24 hours in LB at 30C; diluted 150 µL into 2 mL Ca-HEPES buffer and grew at 30C for another 16 hours</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-21-19/rawdata/</p>VibrioYiWeiStyle0019.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-21-19/rawdata/VibrioYiWeiStyle0019.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibrioYiWeiStyle0019_full.rec,  Reconstruction (Pixel Size 1.28 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-21-19/3dimage_39330/VibrioYiWeiStyle0019_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/jr7zc-tmb43
title: M-MuLV glycogag infected MEFs

description: M-MuLV glycogag
description: <strong>Tilt Series Date:</strong> 2014-04-21</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> MEF cells</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> M-MuLV infected cells provided by Hung Fan (UC Irvine)</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Whole MEFs infected with M-MuLV glycogag were cultured on Au grids, blotted manually and plunge frozen.</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2014-04-21-4/3dimage_41841/</p>14apr21_C184-2MLVglycogag_3t3_pos3_AT1BT1_0004_full.rec,  Reconstruction (Pixel Size 2.0 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2014-04-21-4/3dimage_41841/14apr21_C184-2MLVglycogag_3t3_pos3_AT1BT1_0004_full.rec"
        > <i class="download icon"></i> Download </a></p>

        14apr21_C184-2MLVglycogag_3t3_pos3_AT1BT1_0004.mrc,  Tilt Series (Pixel Size 0.5 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2014-04-21-4/rawdata/14apr21_C184-2MLVglycogag_3t3_pos3_AT1BT1_0004.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.c4qzgq
title: Occurrence Download

description: A dataset containing 1813 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is MYS.14_1",
 "IucnRedListCategory is VU",
 "OccurrenceStatus is Present",
 "Year 2020-2025"
 ]
}

 The dataset includes 1813 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002363-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/x0mvs-60c61
title: Vibrio delta-CheA3

description: Vibrio cholerae strain deleted for CheA3
description: <strong>Tilt Series Date:</strong> 2014-03-05</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Ikuro Kawagishi</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grew in LB 24 hours at 30C; diluted 150 µL into 2 mL Ca-HEPES buffer and grew 16 hours at 30C</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-05-17/rawdata/</p>deltaA3VibrioC0013.mrc,  Tilt Series (Pixel Size 0.33 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-05-17/rawdata/deltaA3VibrioC0013.mrc"
        > <i class="download icon"></i> Download </a></p>

        deltaA3VibrioC0013_full.rec,  Reconstruction (Pixel Size 1.32 nm), 688.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-03-05-17/3dimage_39746/deltaA3VibrioC0013_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.fb5g26
title: Occurrence Download

description: A dataset containing 27503 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Althaea hirsuta"
 ]
}

 The dataset includes 27503 records from 640 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002357-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/n5vjd-s5089
title: Mesoplasma florum dual axis

description: Mesoplasma florum, dual axis, total dose 110 e/A2 - 1
description: <strong>Tilt Series Date:</strong> 2004-08-12</p>
<strong>Data Taken By:</strong> Elizabeth Wright</p>
<strong>Species / Specimen:</strong> Mesoplasma florum</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Dual Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: 15.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> </p>
<strong>Collaborators and Roles:</strong> N/A</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Overnight culture in Mycoplasma media</p>
<strong>Sample Preparation:</strong> R2/2 quantifoil, 10 nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ewr2004-08-12-6/rawdata/</p>mf1_110dt_15um_081304.mrc,  Tilt Series (Pixel Size 6.7 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ewr2004-08-12-6/rawdata/mf1_110dt_15um_081304.mrc"
        > <i class="download icon"></i> Download </a></p>

        mf1b_110dt_15um_081304.mrc,  Tilt Series (Pixel Size 6.7 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ewr2004-08-12-6/rawdata/mf1b_110dt_15um_081304.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bjj8e-yx679
title: Hyphomonas session14 27.5KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2009-05-22</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 130.0 eV/Å²,  defocus: -7.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media, overnight at 4degree...</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
  jsa2009-05-22-67_slicer9276.jpg: Hyphomonas neptunium  .  ring
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-05-22-67/rawdata/</p>09may22b_bx22gr1_043.mrc,  Tilt Series (Pixel Size 0.774 nm), 520.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-05-22-67/rawdata/09may22b_bx22gr1_043.mrc"
        > <i class="download icon"></i> Download </a></p>

        09may22b_bx22gr1_043_1k.rec,  Reconstruction (Pixel Size 1.548 nm), 36.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-05-22-67/3dimage_7704/09may22b_bx22gr1_043_1k.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/4nk01-vb746
title: RodZ oe

description: Raw data files of RodZ oe
description: <strong>Tilt Series Date:</strong> 2009-03-09</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, IMOD</p>
<strong>Collaborators and Roles:</strong> Strains were provided by Anisah Alyahya (Jacobs-Wagner lab). Data collected and processed by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> A plasmid pJS14pxylrodZ was electroporated into CB15N. The cells were then grown in PYE plates containing antibiotics. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-09-20/rawdata/</p>09mar09a_bx346_2_020.mrc,  Tilt Series (Pixel Size 0.632 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-09-20/rawdata/09mar09a_bx346_2_020.mrc"
        > <i class="download icon"></i> Download </a></p>

        zap001.png,  294.4 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-03-09-20/file_2545/zap001.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/q8ytp-45w44
title: E. coli pED208

description: E. coli with plasmid pED208
description: <strong>Tilt Series Date:</strong> 2014-12-16</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Laura Frost</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells arrived dead.</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-12-16-22/rawdata/</p>pED2080014.mrc,  Tilt Series (Pixel Size 0.63 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-12-16-22/rawdata/pED2080014.mrc"
        > <i class="download icon"></i> Download </a></p>

        pED2080014_full.rec,  Reconstruction (Pixel Size 2.52 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-12-16-22/3dimage_48820/pED2080014_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/cmqr9-aze82
title: TRIM5-21R 2D lattice

description: TRIM5-21R 2D lattice prepared by Barbie Ganser-Pornillos and Viswanathan Chandrasekaran
description: <strong>Tilt Series Date:</strong> 2012-11-20</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: None μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Viswanathan Chandrasekarangrids purified the protein, Barbie Ganser-Pornillos assembled protein into 2D lattice. The sample was was plunge frozen and imaged at Caltech by Cora Woodward and Kelly Dryden</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-11-20-15/rawdata/</p>12nov20_TRIM5_21R_grid4_AT1BT1_00010011.mrc,  Tilt Series (Pixel Size 0.45 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-11-20-15/rawdata/12nov20_TRIM5_21R_grid4_AT1BT1_00010011.mrc"
        > <i class="download icon"></i> Download </a></p>

        12nov20_TRIM5_21R_grid4_AT1BT1_00010011_full.rec,  Reconstruction (Pixel Size 1.8 nm), 530.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-11-20-15/3dimage_23789/12nov20_TRIM5_21R_grid4_AT1BT1_00010011_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/83zv5-98j83
title: Pseudomonas aeruginosa wild type

description: wild type after 1h of starvation
description: <strong>Tilt Series Date:</strong> 2014-02-07</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Lisa Racki</p>
<strong>Purification / Growth Conditions / Treatment:</strong> minimal medium for 1h</p>
<strong>Sample Preparation:</strong> vitrobot</p>
  etl2014-02-07-4_slicer8036.jpg: Pseudomonas aeruginosa .  REZ ribosome exclusion zone
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-07-4/rawdata/</p>Paeruginosa_wt_t10004.mrc,  Tilt Series (Pixel Size 0.4 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-07-4/rawdata/Paeruginosa_wt_t10004.mrc"
        > <i class="download icon"></i> Download </a></p>

        Paeruginosa_wt_t10004_full.rec,  Reconstruction (Pixel Size 0.0 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-07-4/3dimage_49249/Paeruginosa_wt_t10004_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/p5477-ftr69
title: Ostreococcus tauri

description: Ostreococcus tauri, nitrogen
description: <strong>Tilt Series Date:</strong> 2006-10-29</p>
<strong>Data Taken By:</strong> Gregory Henderson</p>
<strong>Species / Specimen:</strong> Ostreococcus tauri</p>
<strong>Strain:</strong> RCC745</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 165.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod, bsoft</p>
<strong>Collaborators and Roles:</strong> prepared by Gregory Henderson and Lu Gan; cells provided by Herv� Moreau</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in f/2 medium</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2006-10-29-1/rawdata/</p>OT.st,  Tilt Series (Pixel Size 1.2 nm), 469.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2006-10-29-1/rawdata/OT.st"
        > <i class="download icon"></i> Download </a></p>

        OT_bin2.mrc,  Reconstruction (Pixel Size 2.4 nm), 207.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ghp2006-10-29-1/3dimage_3416/OT_bin2.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/gqvcy-mge44
title: Pva 111908 921

description: Prosthecobacter vanneervenii, 08dec03a_pb_016,
description: <strong>Tilt Series Date:</strong> 2008-12-03</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Prosthecobacter vanneervenii</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> cultured by Martin Pilhofer; data collected by Martin Pilhofer; processed by Martin Pilhofer</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity, blotting 1/-2/2/0/1/4/200</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2008-12-03-16/rawdata/</p>08dec03a_pb_016.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2008-12-03-16/rawdata/08dec03a_pb_016.mrc"
        > <i class="download icon"></i> Download </a></p>

        08dec03a_pb_016_full.rec,  Reconstruction (Pixel Size 1.9 nm), 1.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2008-12-03-16/3dimage_13244/08dec03a_pb_016_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/4fefc-e1044
title: Hyphomonas 1st session 22.5kx

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2008-07-28</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media...</p>
<strong>Sample Preparation:</strong> C-flat grid, 10nm gold, 100% humidity...</p>
  jsa2008-07-28-5_slicer12873.jpg: Stalk
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-07-28-5/rawdata/</p>08jul28b_box17_stack11.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-07-28-5/rawdata/08jul28b_box17_stack11.mrc"
        > <i class="download icon"></i> Download </a></p>

        08jul28b_box17_stack11_1k.rec,  Reconstruction (Pixel Size 1.9 nm), 70.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2008-07-28-5/3dimage_5212/08jul28b_box17_stack11_1k.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.fsnfcn
title: Occurrence Download

description: A dataset containing 79 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Prunus cerasifera",
 "Country is Armenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 79 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002366-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.