cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29132051.v1
title: Bayesian Adaptive Tucker Decompositions for Tensor Factorization

description: Tucker tensor decomposition offers a more effective representation for multiway data compared to the widely used PARAFAC model. However, its flexibility brings the challenge of selecting the appropriate latent multi-rank. To overcome the issue of pre-selecting the latent multi-rank, we introduce a Bayesian adaptive Tucker decomposition model that infers the multi-rank automatically via an infinite increasing shrinkage prior. The model introduces local sparsity in the core tensor, inducing rich and at the same time parsimonious dependency structures. Posterior inference proceeds via an efficient adaptive Gibbs sampler, supporting both continuous and binary data and allowing for straightforward missing data imputation when dealing with incomplete multiway data. We discuss fundamental properties of the proposed modeling framework, providing theoretical justification. Simulation studies and applications to chemometrics and complex ecological data offer compelling evidence of its advantages over existing tensor factorization methods.
DOI: 10.17632/8smwrc7dgz
title: Data for "Refining the roles of productivity, redox, and remineralization on the cadmium isotope composition of marine sediments"

description: This is accompanying data for the manuscript "Refining the roles of productivity, redox, and remineralization on the cadmium isotope composition of marine sediments"
DOI: 10.6084/m9.figshare.12936947.v1
title: Prosit(Non tryptic) - Model - Fragmentation

description: Non-tryptic Prosit fragmentation prediction models for HCD and CID<br>
DOI: 10.6084/m9.figshare.5789079.v2
title: DatabaseVariability.xlsx

description: Data from "Durán et al. Ecology - Under review"<br>There are two spreadsheets with data. The spreadsheet "Data" contains the data used in the different analyses presented in the article. The spreadsheet "Metadata" contains the associated metadata, where a description of all the variables and units can be found.
DOI: 10.6084/m9.figshare.1250074.v2
title: MS agar

description: Mannitol Soya Flour (MS or SFM) agar This medium is used to make a number of Streptomyces species sporulate. Some commonly used strains, including S. scabies and S. venezuelae do not sporulate on MS agar.
DOI: 10.6084/m9.figshare.14578344.v1
title: Edge effects in MPAs

description: The dataset is extracted from 24 empirical studies reporting spatially explicit data for fish or invertebrate population size estimates with respect to distance from MPA bordersThe aim of this study is to describe the dominant spatial pattern of marine populations across MPA borders and to explore potential drivers of these patterns using GAMs (General Additive Models)The dataset contains 1,619 data points that belong to 147 unique samples, representing 72 taxa. This dataset represents fish and invertebrate population size estimates across the borders of 27 MPAs located in 14 countries<br>
DOI: 10.6084/m9.figshare.18176240.v1
title: AHP_data.xlsx

description: Dataset of articles related to AHP retrieved from Scopus database. Data cover period 1979-2021.<br>
DOI: 10.6084/m9.figshare.1316641.v1
title: Socia fingerprints of unemployment

description: <strong>The following datasets are associated to the paper the "Social Fingerprints of Unemployment"</strong> Llorente A, Garcia-Herranz M, Cebrian M, Moro E (2015) Social Media Fingerprints of<br>Unemployment. PLoS ONE 10(5): e0128692. doi: 10.1371/journal.pone.0128692 http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0128692 <strong><br></strong> <strong>Description of the files in this folder</strong> This folder contains two (2) files<br><em>Tij.csv</em><br><em>table_municipalities.csv</em> <strong>Tij.csv</strong><br>This files contains the matrix Tij, i.e. the total number of trips between different municipalities in our database. The file has four columns<br>i -&gt; the municipality origin id of the trips<br>j -&gt; the municipality destination id of the trips<br>Tij -&gt; the number of trips between i and j (symmetric)<br>dij -&gt; the distance between municipalities <strong>table_municipalities.csv</strong><br>This files contains the demographic, unemployment and Twitter variables for each of the municipalities considered. The file has 16 columns<br>id -&gt; the official id of the municipality<br>pobTOT -&gt; total population of the municipality (as of Jan 2013)<br>pobACT -&gt; total active (employable) population of the municipality<br>pobUNEMP -&gt; total population unemployed in the municipality<br>pobACTYOUNG -&gt; total active young (below 25 years) population of the municipality<br>pobUNEMPYOUNG -&gt; total young (below 25 years) population unemployed in the municipality<br>ntwsTOT -&gt; total number of tweets geolocalized in the municipality<br>ntwsWDAY -&gt; total number of tweets from Monday to Friday (working days) in the municipality<br>S-geo -&gt; Geographical Entropy of the trips from/to the municipality<br>S-social -&gt; Social Entropy of the communications fromt/to the municipality<br>nusers -&gt; Total number of users with "home" in the municipality (see paper text)<br>morning -&gt; Total number of tweets between 8-10am during working days in the municipality<br>afternoon -&gt; Total number of tweets between 3-5pm during working days in the municipality<br>night -&gt; Total number of tweets between 12-3am during working days in the municipality<br>nmiss -&gt; Total number of misspellers in the municipality<br>emp -&gt; Total number of tweets mentioning "employment" Id's of the municipalities correspond with the official id's at<br>http://www.ine.es/daco/daco42/codmun/codmun10/10codmunmapa.htm
DOI: 10.6084/m9.figshare.1543389.v2
title: Simulation of Photoacoustic Cylindrical Resonators and Study the Distribution of their First Ordered Resonant Modes

description: Modes Distributions inside two cylinderical photoacoustic resonators
DOI: 10.6084/m9.figshare.3979224.v1
title: Aging norms for IAPS stimulus set

description: • Picture rating study: 57 younger and 48 older adults rated 48 pictures each from the same four emotional categories: arousing positive (12 pictures), arousing negative (12 pictures), non-arousing positive (12 pictures), non-arousing negative (12 pictures). There were two different sets of pictures; half of the participants saw Set 1 and the rest saw Set 2 (meaning we have ratings for 96 pictures in total, with each picture having been rated by at least 24 people). Both sets contained equal numbers of pictures in each emotional category and mean arousal and valence were equated across sets for each of the four categories. Participants made their ratings on the self-assessment manikin, just as in Bradley, Lang, and Cuthbert (2008). Lang, P.J., Bradley, M.M., & Cuthbert, B.N. (2008). International affective picture system (IAPS): Affective ratings of pictures and instruction manual. Technical Report A-8. University of Florida, Gainesville, FL.<br><br>
DOI: 10.17632/frsh4z5f4v
title: Global Distribution of Lava Channels on Venus

description: This dataset is a shapefile containing lava channels mapped globally on the surface of Venus. These channels were mapped in ArcGIS 10.8 and converted to ArcGIS Pro.

Bledsoe_etal_Channels.zip is the shapefile containing the map traces of 66 of the 72 named channels on Venus, following the methods detailed within Bledsoe_Methods.pdf. There are 121 polylines, designated by primary length (1), secondary (2), and data gores (straight). Details are listed within the metadata and attribute table.
DOI: 10.17632/r8v5p7trfm
title: Abnormally heavy cerium stable isotope composition in regolith: Implications for redox tracing

description: This document contains numerical data to build the figures in the main text.
DOI: 10.17632/z4ht3txn2k
title: Accompanying Files for paper entitled: "Genome-scale mapping of DNA damage suppressors through phenotypic CRISPR/Cas9 screens" - Zhao et al. Molecular Cell 2023

description: Accompanying Files for paper entitled: "Genome-scale mapping of DNA damage suppressors through phenotypic CRISPR/Cas9 screens" - Zhao et al. Molecular Cell 2023. This dataset contains Source and additional Data for all figures.
DOI: 10.6084/m9.figshare.19411004.v1
title: Data Sets S1 to S3

description: Data Set S1. Data Sources.Data Set S2. Zircon U-Pb Ages.Data Set S3. Transparent heavy minerals.
DOI: 10.6084/m9.figshare.26798065.v1
title: Baker et al 2024 Evolutionary History of DPANN archaea

description: Unaltered alignments and treefiles from Evolutionary History of DPANN archaea paper
DOI: 10.17632/38z7h96km4
title: Untargeted metabolomics - TINMAN

description: Stool samples before and after prolonged (more than 2 weeks) antibiotic treatment were obtained from pediatric patients and analyzed via untargeted metabolomic profiling by third party laboratory "Metabolon". Further analyses of these results were performed to help determine the relationship between changes in metabolites after antibiotic treatment and the development of antibiotic-associated neutropenia.
DOI: 10.17632/pnnbb847r8
title: Benchmarking digital displays (monitors) for histological diagnoses: the Nephropathology use case

description: Granular data from the assessment of non-inferiority of different monitors/scanners combination for the evaluation of whole slide images (WSI) for the primary diagnosis of renal diseases on histology following the College of American Pathologists (CAP) guidelines.
DOI: 10.25452/figshare.plus.18126782.v1
title: Front depth images supporting "Functional movement screen dataset collected with two Azure Kinect depth sensors"

description: This is depth images of Azure Kinect sensor in front position. <br> This dataset supports the following publication: Xing, QJ., Shen, YY., Cao, R. et al. Functional movement screen dataset collected with two Azure Kinect depth sensors. Sci Data 9, 104 (2022). https://doi.org/10.1038/s41597-022-01188-7 <br>See related materials in collection at: https://doi.org/10.25452/figshare.plus.c.5774969 <br>Collection Description: This presents a dataset for vision-based autonomous functional movement screen (FMS) collected from 45 human subjects of different ages (18-59 years old) executing the following movements: deep squat, hurdle step, in-line lunge, shoulder mobility, active straight raise, trunk stability push-up, and rotary stability. Specifically, shoulder mobility was performed only once by different subjects, while the other movements were repeated for three episodes each. Each episode was saved as one record and was annotated from 0 to 3 by three FMS experts. The main strength of our database is twofold. One is the multimodal data provided, including color images, depth images, and 3D human skeleton joints. The other is the multiview data collected from the two synchronized Azure Kinect sensors in front of and on the side of the subjects. Finally, three-dimensional trajectories, quaternions, and 2D pixel trajectories of 32 joints were recorded. Our dataset contains a total of 1812 recordings, with 3624 episodes. The size of the dataset is 158 GB. As a supplement, we also provide color image data from the other two cameras (back and side low positions). This dataset provides the opportunity for automatic action quality evaluation of FMS.
DOI: 10.6084/m9.figshare.24915843.v1
title: Extended data - Questionnarie, Consent form and Data collection Form.pdf

description: Extended data for data collection form and consent form
DOI: 10.6084/m9.figshare.26143000.v2
title: start-of-season and end-of-season

description: start of season and end of season data derived from Liu et al., (2016)
DOI: 10.6084/m9.figshare.28925330.v1
title: Dataset study -Impact of Technical Standardization on Pneumothorax and Chest Tube Insertion Rates: A Retrospective Learning Curve Analysis of CT-Guided Lung Biopsies

description: This study retrospectively evaluates whether improved needle angulation and procedural standardization have reduced pneumothorax and chest tube insertion rates over time in CT-guided lung biopsies, showing significant decreases linked to technical advancements and enhanced operator knowledge.
DOI: 10.17632/rwp7b8hpfx
title: Abnormally heavy cerium stable isotope composition in regolith: Implications for redox tracing

description: This document contains numerical data to build the figures in the main text.
DOI: 10.4121/20347950.v1
title: ProVerB: Dataset of Tools and Formats for Program Verification

description: ProVerB <sub>ProVerB</sub>, short for <strong>Program Verification Book</strong>, is a project aimed at explaining program verification tools to practicing software developers, and at helping them to find their way around the available tools, clearly and briefly summarising the main purpose of the tool, its current status, relations to other tools, etc. Notable parts of the artefact: Manually created dataset of semi-structured descriptions of tools and formats in the domain of program verification User-friendly browsable and interlinked web frontend version of ProVerB
DOI: 10.6084/m9.figshare.14343302.v2
title: Transcriptome analysis D. stramonium and D. metel

description: We downloaded the whole genome and transcriptome of <i>D. stramonium </i>to extract the TPSs genes and gene prediction was performed using AUGUSTUS (Stanke et al., 2006).
DOI: 10.6084/m9.figshare.22433848.v3
title: Global carbon isoscapes dataset of C3 plant leaves at 0.05° spatial resolution from 2001 to 2020

description: This dataset provides the carbon isotope maps of C<sub>3</sub> plant leaves based on machine learning algorithms and MODIS satellite remote sensing reflectance, atmospheric carbon, vegetation physiology, and geographic parameters estimated for the period 2001-2020 with a spatial resolution of 0.05 degrees.If this data set is essential to your work, or if an important result or finding depends on the global carbon isoscapes data, co-authorship may be appropriate. You must inform us of your analysis and publication plans well in advance of submission of a paper, give us an opportunity to read and intellectually contribute to the manuscript, and, if appropriate, offer co-authorship.Contact: Drs. Guo Chen (chenguo17@cdut.edu.cn) and Xiang Wang (xiangwang_geo@163.com; wangxiang@stu.cdut.edu.cn).
DOI: 10.6084/m9.figshare.27320538.v1
title: Data for detecting trends in hydroclimatic changes in the Svartberget Krycklan catchment

description: Here we use a climate time series from the Krycklan catchment to detect corresponding changes in seasonal runoff in a boreal catchment in Northern Sweden. To do this, we have used 40 years of temperature and precipitation data to categorised into seasons to detect extreme climate indices. Significant changes were observed particularly in the winter with eight indices indicating winters are becoming warmer. Looking at runoff, we have observed increasing baseflow during the winter but decreasing baseflow during the summers. Using the significant climate indices to predict the changes in runoff variability across the 40 years indicated that warmer winters increase winter baseflow but exhaust the water stored to sustain summer baseflow. We verified this using isotope data which showed that stream water reflect winter precipitation signals while summer baseflow had decreasing winter signals. These findings are important for understanding future changes in boreal climate and how catchments water will be affected by the redistribution of season flow.
DOI: 10.17632/b4gbgbtvcd
title: Reports on carvedilol in rosacea and skin cancer.

description: According to the literature, carvedilol is most commonly used for rosacea and for the prevention of skin cancer in the field of dermatology. Carvedilol has curative effect in the treatment of rosacea, which can effectively relieve facial flushing and erythema, and reduce skin temperature. Also, carvedilol prevents malignant transformation and carcinogenesis induced by ultra violet, chemical carcinogens and epidermal growth factor.
DOI: 10.17632/rwt4gsbts5
title: Data for: Discovery of Kenting Modern Stromatolites: A Model for Cyanobacterial Biomineralization and Lamination Mechanism

description: Raw data for all figures in the manuscript by Pei-Hua Wu to be published by Geochimica et Cosmochimica Acta as "Discovery of Kenting Modern Stromatolites: A Model for Cyanobacterial Biomineralization and Lamination Mechanism".
DOI: 10.6084/m9.figshare.14331266.v1
title: GPS non-circular gears.xlsx

description: Dataset presenting the geometric part specification during additive manufacturing of non-circular gears
DOI: 10.6084/m9.figshare.15028662.v1
title: Supplementary Material for: Qualitative Assessment of Medical Information on YouTube: A Multilingual Comparison of Common Urological Conditions

description: <b><i>Introduction:</i></b> Patients nowadays often search video-sharing platforms for online patient education materials. Since previous assessments of urological videos were limited to English, we systematically assessed the quality of videos on treatment of benign prostatic hyperplasia (BPH), prostate cancer (PCa), and urinary stone disease (USD) in 4 different languages on YouTube using validated instruments. <b><i>Methods:</i></b> The search for videos on YouTube addressing treatment options of BPH, PCa, and USD was performed in October 2020 in ­English, French, German, and Italian. Assessed parameters included basic data (e.g., number of views), grade of misinformation, and reporting of conflicts of interest. Quality of content was analyzed using the validated DISCERN questionnaire. Data were analyzed using descriptive statistics. <b><i>Results:</i></b> A total of 240 videos (60 videos in each language) were analyzed. Videos on USD in English had the highest number of views (median views 271,878 [65,313–2,513,007]). The median overall quality of videos assessed showed a <i>moderate</i> quality (2.5–3.4 points out of 5 points for DISCERN item 16). Median total DISCERN score of all videos divided by language showed very similar results: English (39.75 points), French (38 points), German (39.5 points), and Italian (39 points). Comparing the different diseases, videos about BPH showed the highest median scores, especially in German language (median score 43.25 points). <b><i>Conclusions:</i></b> Videos concerning the treatment of BPH, PCa, and USD have a low to moderate quality of content, with no differences seen between the languages assessed. These findings further support the notion of improved patient information materials on video platforms such as YouTube.
DOI: 10.6084/m9.figshare.28023149.v1
title: Inorganic–organic domain dataset

description: The integrated inorganic–organic domain dataset used to train the MACE-Osaka24 models—composed of the inorganic MPtrj dataset and the organic SPICE, QMug, water clusters, and Tripeptides (OFF23) datasets was generated using via the Total Energy Alignment (TEA) method. If you use any of these datasets, please cite the following papers.@article{deng2023chgnet, title={CHGNet: Pretrained universal neural network potential for charge-informed atomistic modeling}, author={Bowen Deng and Peichen Zhong and KyuJung Jun and Janosh Riebesell and Kevin Han and Christopher J. Bartel and Gerbrand Ceder}, year={2023}, eprint={2302.14231}, archivePrefix={arXiv}, primaryClass={cond-mat.mtrl-sci}}<br>@misc{kovacs2023maceoff23, title={MACE-OFF23: Transferable Machine Learning Force Fields for Organic Molecules}, author={Dávid Péter Kovács and J. Harry Moore and Nicholas J. Browning and Ilyes Batatia and Joshua T. Horton and Venkat Kapil and William C. Witt and Ioan-Bogdan Magdău and Daniel J. Cole and Gábor Csányi}, year={2023}, eprint={2312.15211}, archivePrefix={arXiv},}<br>@article{eastman2023spice, title={Spice, a dataset of drug-like molecules and peptides for training machine learning potentials}, author={Eastman, Peter and Behara, Pavan Kumar and Dotson, David L and Galvelis, Raimondas and Herr, John E and Horton, Josh T and Mao, Yuezhi and Chodera, John D and Pritchard, Benjamin P and Wang, Yuanqing and others}, journal={Scientific Data}, volume={10}, number={1}, pages={11}, year={2023}, publisher={Nature Publishing Group UK London}}<br>@article{donchev2021quantum, title={Quantum chemical benchmark databases of gold-standard dimer interaction energies}, author={Donchev, Alexander G and Taube, Andrew G and Decolvenaere, Elizabeth and Hargus, Cory and McGibbon, Robert T and Law, Ka-Hei and Gregersen, Brent A and Li, Je-Luen and Palmo, Kim and Siva, Karthik and others}, journal={Scientific data}, volume={8}, number={1}, pages={55}, year={2021}, publisher={Nature Publishing Group UK London}}<br>@article{isert2022qmugs, title={QMugs, quantum mechanical properties of drug-like molecules}, author={Isert, Clemens and Atz, Kenneth and Jim{\'e}nez-Luna, Jos{\'e} and Schneider, Gisbert}, journal={Scientific Data}, volume={9}, number={1}, pages={273}, year={2022}, publisher={Nature Publishing Group UK London}}<br>@misc{shiota2024taming, title={Taming Multi-Domain, -Fidelity Data: Towards Foundation Models for Atomistic Scale Simulations}, author={Tomoya Shiota and Kenji Ishihara and Tuan Minh Do and Toshio Mori and Wataru Mizukami}, year={2024}, eprint={2412.13088}, archivePrefix={arXiv}, primaryClass={physics.chem-ph}}
DOI: 10.6084/m9.figshare.29064185.v2
title: Dataset Oposisi Biner Relasi Gender Serat Candrarini.docx

description: Ini adalah data hasil analisis relasi gender melalui oposisi biner dari teks Serat Candrarini
DOI: 10.5281/zenodo.15567908
title: Library automation software study
DOI: 10.5281/zenodo.15567909
title: Library automation software study
DOI: 10.6084/m9.figshare.12917570.v2
title: Correlation between induced polarization and sulfide content of rock samples obtained from seafloor hydrothermal mounds of the Okinawa Trough, Japan

description: Complex conductivity of rocks that include sulfides, hydrothermal clay and volcanic rocks.
DOI: 10.6084/m9.figshare.20219408.v1
title: Dogs versus Cats Audio Dataset

description: A small audio dataset generated from YouTube videos. The dataset has 566 cat sounds and 484 dog sounds. This was used as a contextual data source for research into contextual machine learning. <br> All efforts have been made to ensure this dataset was collected in line with copyright legislation regarding fair use. All samples were collected via YouTube and any derivative works of this provided dataset must reference YouTube and the author of this dataset. <br> This work was completed during a PhD programme at the University Of Greenwich.
DOI: 10.6084/m9.figshare.22337995.v1
title: Eucalyptus globulus genes

description: <br> gtf file of Eucalyptus globulus genes. Predicted by BRAKER2 using gene homolgy.
DOI: 10.6084/m9.figshare.8244689.v1
title: Data and codes from: "Habitat structure drives the evolution of aerial displays in birds"

description: The files deposited here should allow anyone to rerun all analyses used in our article. Please, see README.txt for instructions on how to use these files.
DOI: 10.17632/822syk52yw
title: A RIPK1-specific PROTAC degrader achieves potent antitumour activity by enhancing immunogenic cell death. Mannion et al.

description: Original data from the images and western blots from the paper: A RIPK1-specific PROTAC degrader achieves potent antitumour activity by enhancing immunogenic cell death.