cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/cr3xvztwrj.4
title: In Situ Benthic Image Transects from the Disko Fan Conservation Area in the Davis Strait (Eastern Arctic)

description: In 2012 and 2013, Fisheries and Oceans Canada conducted benthic imagery surveys in the Davis Strait and Baffin Basin in two areas then closed to bottom fishing, the Hatton Basin Voluntary Closure (now the Hatton Basin Conservation Area) and the Narwhal Closure (now partially in the Disko Fan Conservation Area). The photo transects were established as long-term biodiversity monitoring sites to monitor the impact of human activity, including climate change, on the region’s benthic marine biota in accordance with the protocols of the Circumpolar Biodiversity Monitoring Program (CBMP) established by the Council of Arctic Flora and Fauna. These images were presented in a technical report that summarises the epibenthic megafauna found in seven image transects from the Disko Fan Conservation Area: 
Baker, E., Beazley, L., McMillan, A., Rowsell, J. and Kenchington, E. 2018. Epibenthic Megafauna of the Disko Fan Conservation Area in the Davis Strait (Eastern Arctic) Identified from In Situ Benthic Image Transects. Can. Tech. Rep. Fish. Aquat. Sci. 3272: vi + 388 p. 
Taxa from ten phyla (Annelida, Arthropoda, Brachiopoda, Bryozoa, Chordata, Cnidaria, Echinodermata, Mollusca, Nemertea, Porifera) were identified from the imagery and reported on a per photo basis in v.4. That data was analyzed to comply with CBMP recommendations. The average abundance (N), number of taxa (S), Margalef d, Shannon Diversity and Simpson’s Index with their Hill equivalents, and Pielou’s Evenness, were calculated for each transect. Bray-Curtis similarity in community composition among transects was calculated from log(x+1)-transformed standardized abundance. UPGMA cluster analysis identified three significantly different depth-related clades. S, N and d were significantly negatively correlated with depth. That work is summarized in:
Kenchington, E., Lirette, C., Treble, M., and Jacobs, K. 2022. Biodiversity Monitoring Stations for Benthic Megafauna in the Disko Fan Conservation Area. Can. Tech. Rep. Fish. Aquat. Sci. 3499:  v + 75 p.
In this v.4 update the abundance of taxa in each photo are provided. Those data can be used to calculate the indices summarized in the 2022 report.
DOI: 10.17632/79257m8c8k.1
title: Global Health Impact of Atmospheric Mercury Emissions from Artisanal and Small-Scale Gold Mining

description: This data deposit includes the codes and data for the paper titled "Global Health Impact of Atmospheric Mercury Emissions from Artisanal and Small-Scale Gold Mining".
DOI: 10.5203/x6hd-2n79
title: BaySys Reports
DOI: 10.17632/8y42cbc7h8.1
title: Dataset: Efficient improvement for water quality analysis with large amount of missing data

description: Water is vital for life and local water pollution can damage the environment and affect human health. Governments and private institutions monitor and regulate water quality to protect the environment and populations. The consequences of pollution can reach far and wide, costing companies significant amounts in cleanup costs and loss of reputation. Most countries have official accredited laboratories and sampling teams that use varied technology, global expertise and local knowledge to provide water quality monitoring for different types of water and different and varied sampling locations. However, one of the main problems associated with monitoring and assessing water quality and meeting minimum standards of potability or usability is the analysis of samples based on local data. The problem lies in the fact that in many cases the data, due to the methodology or technique used or the expertise of the human resource that handles the samples, ends up configured in sets that have a large amount of missing information or data without information. This implies a problem depending on the analysis to be carried out. If you want to estimate a water quality index based on the samples, then you may have biased calculations due to the loss of information.

This dataset has been used for the generation of the manuscript: Efficient improvement for water quality analysis with large amount of missing data. D. Sierra-Porta,M. Tobón-Ospino. This manuscript is being submitted to Sustainable Production and Consumption (2022 Elsevier), Publication of the Institution of Chemical Engineers.
DOI: 10.5203/2nq5-pc53
title: mbgl3
DOI: 10.6084/m9.figshare.3761562.v2291
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.5281/zenodo.5749287
title: Data for the article "Magnetic Sensitivity Distribution of Hall Devices in Antiferromagnetic Switching Experiments"

description: Data for the article "Magnetic Sensitivity Distribution of Hall Devices in Antiferromagnetic Switching Experiments" URL: https://link.aps.org/doi/10.1103/PhysRevApplied.16.064023<br> DOI: 10.1103/PhysRevApplied.16.064023
description: L.B. acknowledges the European Union's Horizon 2020 research and innovation program under Marie Skłodowska-Curie Grant Agreement ARTES No. 793159. L.B. and M.K. acknowledge support from the Graduate School of Excellence Materials Science in Mainz (MAINZ) DFG 266, the DAAD (Spintronics networkProject No. 57334897 and Insulator Spin-Orbitronics Project No. 57524834), and all groups from Mainz acknowledge that this work is funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) TRR 173–268565370 (Projects A01, A03, A11, B02, and B12) and KAUST (OSR-2019-CRG8-4048). R.R. also acknowledges support from the European Commission through Project No. 734187-SPICOLOST (H2020-MSCA-RISE-2016), the European Union's Horizon 2020 research and innovation program through Marie Skłodowska-Curie Actions Grant Agreement SPEC No. 894006 and the Spanish Ministry of Science (Grant No. RYC 2019-026915-I). M.K. acknowledges financial support from the Horizon 2020 Framework Programme of the European Commission under FET-Open Grant Agreement No. 863155 (s-Nebula) and the Research Council of Norway through its Centers of Excellence funding scheme, Project No. 262633 "QuSpin." This work is also supported by ERATO "Spin Quantum Rectification Project" (Grant No. JPMJER1402) and the Grant-in-Aid for Scientific Research on Innovative Area, "Nano Spin Conversion Science" (Grant No. JP26103005), Grant-in-Aid for Scientific Research (S) (Grant No. JP19H05600), and Grant-in-Aid for Scientific Research (C) (Grant No. JP20K05297) from JSPS KAKENHI, Japan.
DOI: 10.5281/zenodo.5749286
title: Data for the article "Magnetic Sensitivity Distribution of Hall Devices in Antiferromagnetic Switching Experiments"

description: Data for the article "Magnetic Sensitivity Distribution of Hall Devices in Antiferromagnetic Switching Experiments" URL: https://link.aps.org/doi/10.1103/PhysRevApplied.16.064023<br> DOI: 10.1103/PhysRevApplied.16.064023
description: L.B. acknowledges the European Union's Horizon 2020 research and innovation program under Marie Skłodowska-Curie Grant Agreement ARTES No. 793159. L.B. and M.K. acknowledge support from the Graduate School of Excellence Materials Science in Mainz (MAINZ) DFG 266, the DAAD (Spintronics networkProject No. 57334897 and Insulator Spin-Orbitronics Project No. 57524834), and all groups from Mainz acknowledge that this work is funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) TRR 173–268565370 (Projects A01, A03, A11, B02, and B12) and KAUST (OSR-2019-CRG8-4048). R.R. also acknowledges support from the European Commission through Project No. 734187-SPICOLOST (H2020-MSCA-RISE-2016), the European Union's Horizon 2020 research and innovation program through Marie Skłodowska-Curie Actions Grant Agreement SPEC No. 894006 and the Spanish Ministry of Science (Grant No. RYC 2019-026915-I). M.K. acknowledges financial support from the Horizon 2020 Framework Programme of the European Commission under FET-Open Grant Agreement No. 863155 (s-Nebula) and the Research Council of Norway through its Centers of Excellence funding scheme, Project No. 262633 "QuSpin." This work is also supported by ERATO "Spin Quantum Rectification Project" (Grant No. JPMJER1402) and the Grant-in-Aid for Scientific Research on Innovative Area, "Nano Spin Conversion Science" (Grant No. JP26103005), Grant-in-Aid for Scientific Research (S) (Grant No. JP19H05600), and Grant-in-Aid for Scientific Research (C) (Grant No. JP20K05297) from JSPS KAKENHI, Japan.
DOI: 10.34740/kaggle/dsv/3989796
title: Elon Musk Tweets
DOI: 10.5281/zenodo.6909078
title: Flows around the magnetic island in the presence of curvature effects

description: Flows parallel to the magnetic field lines in the presence of plasma shaping effects based on the drift kinetic theory for an isolated stationary magnetic island.
DOI: 10.5281/zenodo.6909077
title: Flows around the magnetic island in the presence of curvature effects

description: Flows parallel to the magnetic field lines in the presence of plasma shaping effects based on the drift kinetic theory for an isolated stationary magnetic island.
DOI: 10.5281/zenodo.6908601
title: Seismic Noise from Gornergletscher, Switzerland (Summer 2007)

description: This is a subset of open access data from the following reference; please cite accordingly: Walter, F. (2009). Seismic activity on gornergletscher during gornersee outburst floods. Dissertation, 31(1-2), 14–27. https://doi.org/10 .1007/BF03322148 Curated by T. Sawi for the manuscript (in submission), "An Unsupervised Machine-Learning Approach to Understanding Seismicity at an Alpine Glacier" (2022) by T. Sawi; B. Holtzman; M. Nettles; F. Walter; J. Paisley; submitted to JGR: Earth Surface in August 2022. This data set contains sixty-second samples of glacial seismic noise (N=1,478) from the vertical channel of a Geospace GS-11D geophone operating in shallow borehole at Gornergletscher between June 14 and July 22, 2007. Sampling rate is 1000 samples per second, and the natural frequency of the instrument is around 8 Hz. An STA/LTA filter has been applied to remove records with prominent icequakes in them, although many smaller icequakes remain in the records. Waveform files are named after their event origin time in format 7{MDhms}. For example, waveform "70614004000.sac" occurred on June 14 00:40:00, 2007.<br>
DOI: 10.6073/pasta/d57a74bcff69ed673bfac1de994dd9d2
title: Modeled daily Yolo Bypass inundation

description: Hydrology is one of the major disturbance regimes thought to shape aquatic habitat. However, the San Francisco Estuary (SFE) has been altered by urban and agricultural development. Approximately 95% of the estuary’s wetlands have been diked, channelization is pervasive, and the biological community and water quality have been changed by exotic species introductions, sediment inputs from mining, and pollution from agricultural and urban chemicals. The hydrography has also been altered by upstream dams, which reduce the magnitude of both winter precipitation pulses and spring snow melt pulses when filling reservoirs. In addition to reservoir storage, 35% to 65% of tributary inflow is diverted by large water diversions, as well as thousands of smaller agricultural pumps and siphons. Nevertheless, the SFE retains a substantial area of seasonal off-channel habitat in the Sacramento River, the Yolo Bypass. The Yolo Bypass is hydraulically dynamic and is strongly influenced by tides during low discharge periods and dominated by fluvial river dynamics during flood events. This river floodplain-tidal slough complex is, therefore, much more hydrodynamically variable than the adjacent mainstem Sacramento River channel and benefits from additional metrics than those typically measured for river systems. These data are the modeled duration of inundation in the Yolo Bypass, which was approximated as the number of days in which Yolo Bypass flow was greater than 113.27 m3/s following an inundation event from the Sacramento River (e.g., when the stage height of the Sacramento River exceeded the height of the Fremont Weir, 10.2 meters). Inundation in the Yolo Bypass creates a complex transition zone between the river floodplain and tidal slough habitat, which likely represents the historically dominant habitat in the North Delta. Therefore, inundation brings many advantages for native fish, such as increased growth opportunities on the floodplain, an alternative route into the estuary, and an expansion and diversification of rearing habitat. This definition for inundation duration was developed in Goertler et al. 2017.
DOI: 10.18434/mds2-2702
title: Liposome Stability Study Time-Series Data
DOI: 10.5281/zenodo.6909156
title: Microtus oregoni decontaminated gx

description: .
DOI: 10.5281/zenodo.6909155
title: Microtus oregoni decontaminated gx

description: .
DOI: 10.17608/k6.auckland.17082647
title: The Genetic Contributions to Pre-Eclampsia

description: Supplementary data for Genevieve Boom's honours thesis 2021.
DOI: 10.17608/k6.auckland.17082647.v1
title: The Genetic Contributions to Pre-Eclampsia

description: Supplementary data for Genevieve Boom's honours thesis 2021.
DOI: 10.5281/zenodo.6909197
title: Merops pusillus decontaminated gx

description: .
DOI: 10.5281/zenodo.6909196
title: Merops pusillus decontaminated gx

description: .
DOI: 10.5281/zenodo.6909300
title: Erythroxylum coca zanfona 1

description: .
DOI: 10.5281/zenodo.6909299
title: Erythroxylum coca zanfona 1

description: .
DOI: 10.6073/pasta/47c35311db955f6766f431570c370827
title: Land use and land cover (LULC) classification of the CAP LTER study area (central Arizona, USA) area using 2015 Landsat imagery

description: ## overview The project aims to extend the CAP LTER long-term, land-use/land-cover (LULC) datasets to facilitate environmental change monitoring and social-ecological studies regarding urban sprawl and dynamics, urban heat islands, and outdoor water consumption, among others. Six LULC maps at 30 m resolution were previously created from 1985 to 2010 at five year intervals (Zhang and Li, 2017). This project updates that suite with a seventh map for 2015. As with the prior set, systematic object-based classification was utilized to ensure map consistency and direct comparison capability over time. The map comprises 11 land-use/land-cover classes with an overall accuracy of 89.1%. ## literature cited - Zhang, Y. and X. Li. 2017. Land cover classification of the CAP LTER study area at five-year intervals from 1985 to 2010 using Landsat imagery ver 1. Environmental Data Initiative. https://doi.org/10.6073/pasta/dab4db27974f6c8d5b91a91d30c7781d (Accessed 2022-07-13).
DOI: 10.6084/m9.figshare.20079099
title: Bronchiectasis in patients with antineutrophil cytoplasmic antibody-associated vasculitis: a case control study on clinical features and prognosis

description: Bronchiectasis was reported in 2%-40% of patients with antineutrophil cytoplasmic antibody-associated vasculitis (AAV), but there were no studies on the prevalence, risk factors and impact of AAV-associated bronchiectasis in Chinese patients. AAV patients were retrospectively enrolled. The clinical, laboratory and imaging features and the prognosis were analyzed and compared between those with and without bronchiectasis. Bronchiectasis was present in 48/212 (22.6%) of our AAV patients, among whom 41 were confirmed in 210 patients (19.5%) who received chest HRCT at the initial diagnosis of AAV. There were more women and fewer smokers in those with bronchiectasis as compared to those without. Cases with positive anti-MPO were more likely to have bronchiectasis (26.2%), and those with bronchiectasis were more likely to be anti-MPO positive (93.8%). Patients who had a diagnosis of bronchiectasis before AAV were more likely to have nervous system involvement, while patients without bronchiectasis had higher 24h proteinuria. The presence of bronchiectasis showed no significant effect on the 1, 3, 5-year survival. Nearly 20% of patients showed bronchiectasis on chest HRCT at the initial diagnosis of AAV, and positivity of anti-MPO was associated with bronchiectasis in a Chinese cohort of AAV patients.
DOI: 10.6084/m9.figshare.20079099.v1
title: Bronchiectasis in patients with antineutrophil cytoplasmic antibody-associated vasculitis: a case control study on clinical features and prognosis

description: Bronchiectasis was reported in 2%-40% of patients with antineutrophil cytoplasmic antibody-associated vasculitis (AAV), but there were no studies on the prevalence, risk factors and impact of AAV-associated bronchiectasis in Chinese patients. AAV patients were retrospectively enrolled. The clinical, laboratory and imaging features and the prognosis were analyzed and compared between those with and without bronchiectasis. Bronchiectasis was present in 48/212 (22.6%) of our AAV patients, among whom 41 were confirmed in 210 patients (19.5%) who received chest HRCT at the initial diagnosis of AAV. There were more women and fewer smokers in those with bronchiectasis as compared to those without. Cases with positive anti-MPO were more likely to have bronchiectasis (26.2%), and those with bronchiectasis were more likely to be anti-MPO positive (93.8%). Patients who had a diagnosis of bronchiectasis before AAV were more likely to have nervous system involvement, while patients without bronchiectasis had higher 24h proteinuria. The presence of bronchiectasis showed no significant effect on the 1, 3, 5-year survival. Nearly 20% of patients showed bronchiectasis on chest HRCT at the initial diagnosis of AAV, and positivity of anti-MPO was associated with bronchiectasis in a Chinese cohort of AAV patients.
DOI: 10.6084/m9.figshare.16584056
title: Supplemental Table S1 - S4

description: <strong>Supplemental Table S1: Comparison of cellular size, shape, and speed of PAECs cultured on 0.22 kPa, 4 kPa, 30 kPa and plastic with respect to those cultured on 1.25 kPa hydrogels.</strong> Spread area, circularity, and speed of PAECs cultured on collagen-coated hydrogel of shear modulus 1.25 kPa versus those cultured on collagen-coated hydrogels with a shear modulus of 0.22 kPa, 4 kPa, 30 kPa, and plastic. These data are the mean ± standard deviation from five different independent experiments. These data are shown in Fig. 3. <br> <strong>Supplemental Table S2:</strong> <strong>Comparison of the PMF intensity (i.e., standard deviation of pixel intensity over 5 consecutive frames) at intercellular regions with respect to the regions without cells.</strong> The median value of the standard deviation of pixel intensity across five successive frames (defined as PMF intensity) is compared with the same property obtained in no-cell regions (i.e., regions without cells) for PAEC cultures on hydrogels with a shear modulus of 1.25 kPa versus 30 kPa. Comparison is shown for extracellular Ca<sup>2+</sup> concentration of 2 mM versus 0.1 μM. These data are the mean ± standard deviation from five different independent experiments. The data is shown in Fig. 4. <br> <strong>Supplemental Table S3:</strong> <strong>Comparison of baseline PMF intensity of (A) PAECs cultured on 30 kPa versus on 1.25 kPa hydrogels, and (B) PAECs cultured in 0.1 μM extracellular Ca</strong><sup><strong>2+</strong></sup> <strong>versus 2 mM extracellular Ca</strong><sup><strong>2+</strong></sup><strong>.</strong> On the left is the comparison of PAECs on 1.25 kPa hydrogel versus those on 30 kPa hydrogel. On the right is the comparison of PAECs in normocalcemic (2 mM Ca<sup>2+</sup>) versus hypocalcemic (0.1 μM Ca<sup>2+</sup>) culture medium. These data are the mean ± standard deviation from five different independent experiments. These two tables present two different comparisons of the same four sets of experiments shown in Fig. 5 and 6. <br> <strong>Supplemental Table S4: Comparison of the range and duration of ΔPMF in PAECs cultured on 30 kPa versus 1.25 kPa hydrogels.</strong> The first column shows a comparison of the range of ΔPMF between PAECs cultured on 1.25 kPa hydrogels versus those cultured on 30 kPa hydrogels. The second column shows a comparison of the duration of ΔPMF between PAECs cultured on 1.25 kPa hydrogels versus those cultured on 30 kPa hydrogels. These data are the mean ± standard deviation from five different independent experiments. These data are shown in Figs. 5 and 6.
DOI: 10.6084/m9.figshare.16584056.v1
title: Supplemental Table S1 - S4

description: <strong>Supplemental Table S1: Comparison of cellular size, shape, and speed of PAECs cultured on 0.22 kPa, 4 kPa, 30 kPa and plastic with respect to those cultured on 1.25 kPa hydrogels.</strong> Spread area, circularity, and speed of PAECs cultured on collagen-coated hydrogel of shear modulus 1.25 kPa versus those cultured on collagen-coated hydrogels with a shear modulus of 0.22 kPa, 4 kPa, 30 kPa, and plastic. These data are the mean ± standard deviation from five different independent experiments. These data are shown in Fig. 3. <br> <strong>Supplemental Table S2:</strong> <strong>Comparison of the PMF intensity (i.e., standard deviation of pixel intensity over 5 consecutive frames) at intercellular regions with respect to the regions without cells.</strong> The median value of the standard deviation of pixel intensity across five successive frames (defined as PMF intensity) is compared with the same property obtained in no-cell regions (i.e., regions without cells) for PAEC cultures on hydrogels with a shear modulus of 1.25 kPa versus 30 kPa. Comparison is shown for extracellular Ca<sup>2+</sup> concentration of 2 mM versus 0.1 μM. These data are the mean ± standard deviation from five different independent experiments. The data is shown in Fig. 4. <br> <strong>Supplemental Table S3:</strong> <strong>Comparison of baseline PMF intensity of (A) PAECs cultured on 30 kPa versus on 1.25 kPa hydrogels, and (B) PAECs cultured in 0.1 μM extracellular Ca</strong><sup><strong>2+</strong></sup> <strong>versus 2 mM extracellular Ca</strong><sup><strong>2+</strong></sup><strong>.</strong> On the left is the comparison of PAECs on 1.25 kPa hydrogel versus those on 30 kPa hydrogel. On the right is the comparison of PAECs in normocalcemic (2 mM Ca<sup>2+</sup>) versus hypocalcemic (0.1 μM Ca<sup>2+</sup>) culture medium. These data are the mean ± standard deviation from five different independent experiments. These two tables present two different comparisons of the same four sets of experiments shown in Fig. 5 and 6. <br> <strong>Supplemental Table S4: Comparison of the range and duration of ΔPMF in PAECs cultured on 30 kPa versus 1.25 kPa hydrogels.</strong> The first column shows a comparison of the range of ΔPMF between PAECs cultured on 1.25 kPa hydrogels versus those cultured on 30 kPa hydrogels. The second column shows a comparison of the duration of ΔPMF between PAECs cultured on 1.25 kPa hydrogels versus those cultured on 30 kPa hydrogels. These data are the mean ± standard deviation from five different independent experiments. These data are shown in Figs. 5 and 6.
DOI: 10.6084/m9.figshare.20379918
title: Statistiques.numbers

description: Data used for statistical purpose for the study.
DOI: 10.6084/m9.figshare.20379918.v1
title: Statistiques.numbers

description: Data used for statistical purpose for the study.
DOI: 10.6084/m9.figshare.20379921
title: TPLO BioMedtrix - Caselog.numbers

description: Caselog used for the study
DOI: 10.34740/kaggle/dsv/3989958
title: US counties COVID 19 dataset
DOI: 10.5281/zenodo.6909419
title: SpatialSort: Supporting Datasets

description: All data introduced in the publication "SpatialSort: A Bayesian Model for Clustering and Cell Population Annotation of Spatial Proteomics Data" are deposited here. Forward simulated datasets, spatial Gaussian mixture datasets, semi-real datasets, and MIBI datasets are included. Code to run SpatialSort can be found at https://github.com/Roth-Lab/SpatialSort.