cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/v7bbs5cx7p.3
title: Sustainable Systematic Literature Reviews

description: Context: Systematic Literature Reviews (SLR) have been recognized as an important research method for summarizing evidence in Software Engineering (SE). At the same, SLR still presents several problems, such as the high resource consumption (mainly human resources) and lack of effective impact on SE practitioners, although much research has already been done. 
Objective: The main goal of this paper is to explore the concept of sustainability in the SLR area, intending to contribute to understanding better and solving such problems in an integrated way. More specifically, this paper characterizes what sustainable SLR are, their core characteristics, critical factors (i.e., sensitive points in the SLR process), and guidelines for conducting such SLR.
Method: We performed a meta-ethnographic study to find key concepts of sustainable software systems and transpose them to sustainable SLR. For this, we systematically selected 16 studies about sustainable software systems and 14 distinguished studies about SLR. Following, we extracted the main keywords and metaphors, determined how both areas are correlated, and transposed them to obtain a set of core characteristics of sustainable SLR as well as critical factors and guidelines. Additionally, we validated them with specialists using the Delphi method. 
Results: We found 15 core characteristics that offer a broad view of sustainable SLR, 15 critical factors in the SLR process that should be carefully addressed when conducting and updating SLR, and also 16 guidelines to manage SLR from the sustainability perspective. 
Conclusion: The concept of sustainability in SLR can contribute to solving SLR problems in a more integrated way, while this work could change the mindset of the SLR community about the need to conduct sustainable SLR.

This dataset provides all artifacts created in each step of this studies.
DOI: 10.17632/nx8kd33dng.3
title: Comparative Feasibility Study of Physiological Signals fromWristband- Type Wearable Sensors to Assess Occupants’ Thermal Comfort

description: Physiological data (i.e., PPG, EDA, and SKT) from an empathica wearable biosensor and thermal preference vote during field experiments.
DOI: 10.17632/kt7m97t7zg.1
title: Evaporation of levitating microdroplets containing luminescent Gd2O3:Nd3+ nanoparticles (also with Fe-Co nanoparticles)

description: Microdroplets of suspension were levitated in a linear quadrupole trap and studied as described e.g. in Y. Shopa et al., JQSRT 296 (2023). The suspended phase consisted of nanoparticles of Gd2O3:Nd3+ of several sizes and concentrations. In a few experiments, Fe-Co nanoparticles of ~1 micrometre diameter were also added. The continuous phase consisted of diethylene (2EG) and tetraethylene (4EG) glycols as well as dimethyl sulfoxide (DMSO). Experiments with droplets of pure liquids and suspensions of only Fe-Co nanoparticles were performed for comparison. The data is divided into the folders correspondingly. Luminescence was excited with an 806 nm diode laser (CW, ~1.5 W). A group of 6 luminescence lines were visible in IR: 879, 892, 894, 911, 927, and 942. We also followed the temporal evolution of several lines in scattering at the right angle (usually 806 nm (IR laser) and 662 nm (additional red laser)). Sometimes also 443, 523, 631, 650, 772, 786 and 853 nm (back-light LEDs, non-coherent parts of laser lines and others of immediate interest): files *-Spectra.csv, where * (in hh_mm_ss format) always denotes the time of measurement file creation. Simultaneously the shadow image of the droplet was recorded (non-coherent light, 631 nm LED). The droplet radius was measured by fitting an ellipse to the shadow edge. The ellipse parameters temporal evolution are stored in *-Shadow.pdf files: time, mean diameter (mean of the ellipse axes), long axis rotation, X and Y of the centre, long and short axis, border length, X and Y of “the centre of mass” of the border, fitting error. The microdroplet's vertical position was stabilised with a DC field. The corresponding voltage variation and other stabilisation system parameters are stored in *.csv files: KeyStab: 0 – stabilisation off, 2 – on, k_PID – proportionality parameter of the software voltage regulator, freq – trapping AC field frequency. In some cases, partially concurrently, light was collected at a right angle with a PMT for the green 512 or 806 nm laser. The photon count rate is stored in *-CRM.csv files. Time stored in corresponding files was synchronised. The "Laser on/off" pertains to the 806 nm laser. Further details can be found in the readme.txt files in the corresponding folder. (No)_th_spectrum.csv represents the ith recorded spectrum from the corresponding experiment. The parameters of sample DI119 can be found in the paper cited above. The parameters of samples DI163 and DI230 can be found in the .ppt files in the root directory.
DOI: 10.17632/7tpjwmxcwd
title: nsp8_kurauskas

description: NMR spectra of SARS-CoV-2 full-length nsp8 protein: in complex with different ratios of interaction partner nsp7, as well as free nsp8 spectra at different protein and salt concentrations. Spectra include 4D methyl NOESY spectra used for the assignment of nsp8 (in nsp7-nsp8 complex). Spectra show large contrast between nsp7 bound nsp8 spectra and free nsp8 spectra. While nsp7 bound nsp8 spectra displays sharp peaks and a good correspondence with the X-ray structures, free nsp8 spectra is broad suggesting dynamic nature of nsp8. We have studied what biophysical/biological process leads to spectral broadening of nsp8, and based on this and additional data came to conclusion that nsp8 is a molten globule in its free state.
DOI: 10.17632/ch9fkgfctk.1
title: Smoking status is a negative predictor of six-month cutaneous lupus activity trends: a prospective cohort study (Supplementary Materials)

description: Supplementary materials for the Journal of American Academy of Dermatology publication: "Smoking status is a negative predictor of six-month cutaneous lupus activity trends: a prospective cohort study"
DOI: 10.17632/7tpjwmxcwd.1
title: nsp8_kurauskas

description: NMR spectra of SARS-CoV-2 full-length nsp8 protein: in complex with different ratios of interaction partner nsp7, as well as free nsp8 spectra at different protein and salt concentrations. Spectra include 4D methyl NOESY spectra used for the assignment of nsp8 (in nsp7-nsp8 complex). Spectra show large contrast between nsp7 bound nsp8 spectra and free nsp8 spectra. While nsp7 bound nsp8 spectra displays sharp peaks and a good correspondence with the X-ray structures, free nsp8 spectra is broad suggesting dynamic nature of nsp8. We have studied what biophysical/biological process leads to spectral broadening of nsp8, and based on this and additional data came to conclusion that nsp8 is a molten globule in its free state.
DOI: 10.17632/h9kgc3zpj2.1
title: The role of Ca-phosphates and silicates in the storage and transport of phosphorus at the upper-to-lower mantle transition: an experimental study to 25 GPa in a model peridotitic bulk composition

description: EPM single point analyses of all coexisting phases (bridgmanite, clinoenstatite, davemaoite, ferropericlase, forsterite, garnet, quenched liquid, ringwoodite, tuite and wadsleyite) in a phosphorus enriched peridotite at upper to lower mantle transition zone conditions. 
Experiments were performed in a P-T range of 15-25 GPa and between 1600 and 1800°C. 
Additional SIMS analyses of the phosphorus content in bridgmanite, high pressure clinoenstatite and ferropericlase.
DOI: 10.17632/4w8sxxmtx2.1
title: Supplementary Materials - Structured, Sintered, and Rastered Strategies for Fluid Wicking in Additively Manufactured Heat Pipes

description: Supplementary material associated with the paper titled "Structured, Sintered, and Rastered Strategies for Fluid Wicking in Additively Manufactured Heat Pipes". Figures, tables and code.
DOI: 10.17632/cw3tb7h6mm.1
title: Thermal tolerance data

description: Research hypothesis
We first hypothesized that acclimation improves tolerance to heat and cold in the life stage of T. batrachopa and that the response to acclimation differs for each life stage. Secondly, we hypothesized that pre-exposure to cold and warm temperatures improves the survival of each T. batrachopa life stage, and survival differs among life stages. 
Notable findings
The life stages of T. batrachopa showed significant variation in their thermal tolerance. The acclimation ability of T. batrachopa varied with acclimation temperatures and life stages, and the results were pronounced for larval stages. The larval stages had higher CTmin and CTmax than adult moths across all acclimation temperatures. Instar 4 larvae were the most heat and cold-tolerant after acclimation in all temperatures. Pre-exposure for 2h and exposure for 2h didn’t significantly improve each life stage's survival. However, the adult moths had a higher %survival than larval stages after RHH and RCH. 

Our data was collected to determine the T. batrachopa's ability to adapt and survive unfavourable temperatures. The thermal tolerance assay were performed on larval and adult moths stages of this pests since they are key or damaging life stages. 

The data can be interpreted by understanding the impact that acclimation temperatures, and pre-exposure temperatures have on survival of T. batrachopa. Temperature has a great influence on development and survival of insect species. Our study addressed the influence of temperature variations on T. batrachopa life stages. This will help to understand how T. batrachopa survives temperatures variations in the natural habitat due to climated change.
DOI: 10.17632/w8d49vjnkt.1
title: Dataset for "Senescent dermal fibroblasts cause hypertrophy of epidermal keratinocytes in an Alvetex-based 3D full thickness skin model"

description: The dataset contains the averages for all epidermal measurements for each 3D skin model (both untransformed and normalised) containing senescent fibroblasts between 0 and 100% seeding density together with the respective p values from 1-Way ANOVA, 2-Way ANOVA and linear regression (sheet data and p values and sheet 1). It also contains the derived heatmaps (sheets heatmaps raw and relative data) and the histogram data (sheet 3).
DOI: 10.17632/7wsc2yn3vm.1
title: Gaming Disorder Test - Czech validation data

description: In 2019, Gaming Disorder (GD) was acknowledged as an official diagnosis by the World Health
Organization. The Gaming Disorder Test (GDT) is the most widely used tool to measure GD; however,
due to its novelty, various measurement properties are still unexplored, and the number of validated
language variants is still limited. The present study is the first to assess the psychometric properties
of the Czech version of the GDT. Further, it focuses on its temporal prevalence and stability, gaming
genre invariance, and criterion validity. A large-scale sample of adult Czech gamers collected at two
points within nine months was analysed – T1 N = 5356; T2 N = 6077; longitudinal sample N = 1430.
Confirmatory factor analysis (CFA), structural equation modelling (SEM), and multigroup CFA were
employed to assess the measurement invariance. The study confirmed the one-factor structure of
the GDT and showed that it is invariant across preferred gaming genres and the time of data
collection. It showed a negative relationship with life satisfaction and a positive relationship with
anxiety, even when controlling for their mutual relationships. The prevalence in the longitudinal
sample was equal to or below 1.9% in each wave, but only 0.5% in the longitudinal sample (hence
n = 7 participants fulfilled in both waves the criteria for GD). The study suggests that the Czech
version of the GDT has good psychometric properties, including temporal stability and invariance
across gaming genres, so it is suitable for the survey type and epidemiological investigation of the
ICD-11´s Gaming Disorder.
DOI: 10.17632/v5mfx33m7n.1
title: Comparative Analysis of Thermoregulation Models to Assess Heat Strain in Moderate to Extreme Heat: Data

description: The dataset includes source codes for various thermoregulation models used to validate and compare performance in simulating heat strain under moderate to extreme heat exposure. The folder is organized into four subfolders, each containing the source code and output files for a specific thermoregulation model:

Modified Stolwijk Model (Stolwijk-2024 Model)
Traditional Stolwijk Model (Stolwijk-1971 Model)
Two-Node Gagge Model
JOS-3 Model
Contents and Structure
Source Codes:
Each subfolder contains the model's source code written in MATLAB/Python. The codes are extensively documented with comments explaining the purpose and functionality of each component, ensuring ease of use and modification.

Output Files:
The output files illustrate model simulations for various scenarios, including extreme heat exposure. For example, the models replicate the conditions described in Case 7 of Table 2 in the manuscript.

Reference for Experimental Data and Exposure Details
The experimental data and comprehensive descriptions of the exposure scenarios are derived from:
Stolwijk, J. A., & Hardy, J. D. (1966). Partitional calorimetric studies of responses of man to thermal transients. Journal of Applied Physiology, 21(3), 967–977.

This seminal work provides the foundation for comparing the models' predictions to real-world physiological responses.

Additional Resources
Model Descriptions:
The detailed mathematical formulations and governing equations for each model are available in the manuscript and its supplementary material. These resources provide critical insights into the underlying mechanisms and assumptions of the thermoregulation models.

Use and Citation Guidelines:
If you use, reproduce, or modify the source codes, please cite the following publication:
Comparative Analysis of Thermoregulation Models to Assess Heat Strain in Moderate to Extreme Heat, published in Journal of Thermal Biology.
DOI: 10.17632/mxpnhs5t8d.1
title: What determines crime - prosperity or poverty?

description: The dataset presents six crime types, including fights and battery, drug crimes, thefts of property, apartment break-ins, car-related crimes and property damage reported for 94 districts in the city of Szczecin (Poland) in 2017.
Crime data is assisted with indicators of well-being (poverty and prosperity) represented by: (1) disposable income (PLN) per one person, (2) consumption expenses per one person, (3) share of green areas in percentage, (4) population assisted by the Municipal Family Assistance Center per 1,000 persons, (5) unemployment per 1,000 persons, (6) population density per sq km.
DOI: 10.17632/k62vt84p9j.1
title: A Digital Twin for Assessment of Remaining Useful Life of Offshore Wind Turbines Structure.

description: Preprint
DOI: 10.17632/knhr63zwvw.1
title: LINF_200013200

description: Holo-[acyl-carrier-protein] synthase; Leishmania infantum (strain JPCM5)
DOI: 10.15161/oar.it/143273
title: Carta Geologica d'Italia alla scala 1:50.000, F. 599 Patti

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:25.000 (eseguiti tra il 2000 e il 2005) comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.17632/s3zg99g4ct.1
title: LINF_200011700

description: Kinesin heavy chain; Leishmania infantum (strain JPCM5)
DOI: 10.15161/oar.it/143272
title: Carta Geologica d'Italia alla scala 1:50.000, F. 599 Patti

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:25.000 (eseguiti tra il 2000 e il 2005) comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.17632/j3zhzzv9nw.1
title: Convergence of life history and physiology during range expansion toward the phenotype of the native sister species

description: In our globally changing planet many species show range expansions whereby they encounter new thermal regimes that deviate from those of their source region. Pressing questions are to what extent and through which mechanisms, plasticity and/or evolution, species respond to the new thermal regimes and whether these trait changes are adaptive. Using a common-garden experiment, we tested for plastic and evolutionary trait changes in life history and a set of understudied biochemical/physiological traits during the range expansion of the damselfly Ischnura elegans from France into a warmer region in Spain. To assess the adaptiveness of the trait changes we used the phenotype of its native sister species in Spain, I. graellsii, as proxy for the locally adapted phenotype. While our design cannot fully exclude maternal effects, our results suggest that edge populations adapted to the local conditions in the newly invaded region through the evolution of a faster pace-of-life (faster development and growth rates), a smaller body size, a higher energy budget and increased expression levels of the heat shock gene DnaJ. Notably, based on convergence toward the phenotype of the native sister species and its thermal responses, and the fit with predictions of life history theory these potential evolutionary changes were likely adaptive. Nevertheless, the convergence toward the native sister species is incomplete for thermal plasticity in traits associated with anaerobic metabolism and melanization. Our results highlight that evolution might at least partly contribute in an adaptive way to the persistence of populations during range expansion into new thermal environments and should be incorporated when predicting and understanding species’ range expansions.
DOI: 10.17632/xdj9v9rk4z.1
title: LINF_200022500

description: Protein with WD-40 repeats; Leishmania infantum (strain JPCM5)
DOI: 10.17632/7dwm7sg6n9
title: Dataset of non-redundant forest metrics used to model beetle richness and abundance in the Black Brook District

description: Beetle richness and abundance were obtained using flight intercept traps for two years in forests of different seral stages in the Black Brook District, New Brunswick, Canada. Forest metrics were obtained through traditional forest inventories and LiDAR (Light Detection and Ranging).
DOI: 10.17632/7dwm7sg6n9.1
title: Dataset of non-redundant forest metrics used to model beetle richness and abundance in the Black Brook District

description: Beetle richness and abundance were obtained using flight intercept traps for two years in forests of different seral stages in the Black Brook District, New Brunswick, Canada. Forest metrics were obtained through traditional forest inventories and LiDAR (Light Detection and Ranging).
DOI: 10.17632/ghcn9j68yg.1
title: LINF_200015800

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/fyc4tgsp3n.1
title: Modelling dataset of precipitation stable isotope in China, 1961-2022 (0.5°×0.5°)

description: We developed a highly effective fusion machine learning model (δ18O model with resulted RMSE = 2.66, R2 = 0.74), created a precipitation isotope dataset for 1961-2022.
DOI: 10.17632/3jhwxfd4z3.1
title: Combining the 15N Gas flux method and isotopocule data for the determination of soil N2O sources

description: R script for the linear system computations.
DOI: 10.17632/kgw463f844.1
title: Rapid bark-mediated tree stem methane transport occurs independently of the transpiration stream in Melaleuca quinquenervia

description: This electronic data available here was used to write the manuscript titled: Rapid bark-mediated tree stem methane transport occurs independently of the transpiration stream in Melaleuca quinquenervia, which was accepted in New Phytologist (27/10/2023). 

A summary of the research findings in this publication are:
• Tree stem methane emissions are important components of lowland forest methane budgets. The potential for species-specific behaviour among co-occurring lowland trees with contrasting bark characteristics has not been investigated.

• We compare bark-mediated methane transport in two common lowland species of contrasting bark characteristics (Melaleuca quinquenervia featuring spongy/layered bark with longitudinally-continuous airspaces and Casuarina glauca featuring hard/dense common bark) through several manipulative experiments. 

• Firstly, the progressive cutting through M. quinquenervia bark layers caused exponential increases in methane fluxes (~3 orders of magnitude), however sapwood-only fluxes were lower, suggesting that upward/axial methane transport occurs between bark layers. Secondly, concentrated methane pulse injections into exposed M. quinquenervia bark, revealed rapid axial methane transport rates (1.42 mm/s), which were further supported through lab-simulated experiments (1.41 mm/s). Lab-simulated radial CH4 diffusion rates (through bark) were ~20-times slower. Finally, girdling M. quinquenervia stems caused a near-instantaneous decrease in methane flux immediately above the cut. In contrast, girdling C. glauca displayed persistent, though diminished, methane fluxes.

• Overall, the experiments revealed evidence for rapid ‘between-bark’ methane transport independent from the transpiration stream in M. quinquenervia, which facilitates diffusive axial transport from the rhizosphere and/or sapwood sources. This contrasts with the slower, radial ‘through-bark’ diffusive-dominated gas transportation in C. glauca.
DOI: 10.17632/454bcbrc6t.1
title: Appendix1_Onion_Cabbage_reduced_agrochemicals

description: Data that support the findings of the manuscript entitled "Unraveling the effects of agricultural management practices on invertebrate communities in horticultural agroecosystems"
DOI: 10.17632/tf585hwkj3.4
title: The fission yeast SUMO-targeted Ubiquitin Ligase Slx8 functionally associates with clustered centromeres and the silent mating type region at the nuclear periphery

description: Source data files of the article "The fission yeast SUMO-targeted Ubiquitin Ligase Slx8 functionally associates with clustered centromeres and the silent mating type region at the nuclear periphery"

Shrena Chakraborty1,2 , Joanna Strachan3, Kamila Schirmeisen1,2, Laetitia Besse5, Eve Mercier1,2 Karine Fréon1,2, Haidao Zhang3, Ning Zhao3, Elizabeth H Bayne3* Sarah AE Lambert1,2,7,*



1. Institut Curie, Université PSL, CNRS UMR3348, 91400 Orsay, France.
2. Université Paris-Saclay, CNRS UMR3348, 91400 Orsay, France.
3. Institute of Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3FF, UK
5. Institut Curie, Université PSL, CNRS UAR2016, Inserm US43, Université Paris-Saclay, Multimodal Imaging Center, 91400 Orsay, France.
7. Equipe Labélisée Ligue Nationale Contre le cancer, France

* Corresponding authors: sarah.lambert@curie.fr; Elizabeth.bayne@ed.ac.uk
DOI: 10.5281/zenodo.14629955
title: The pharmaceutical quality of freeze -dried tablet s containing therapeutic bacteriophages against Pseudomonas aeruginosa and Staphylococcus aureus

description: Original figures for the paper.
DOI: 10.5281/zenodo.14629956
title: The pharmaceutical quality of freeze -dried tablet s containing therapeutic bacteriophages against Pseudomonas aeruginosa and Staphylococcus aureus

description: Original figures for the paper.