cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/44d165ed8903050068f0ef5aa79b732c
title: Virgin Islands National Park: Coral Reef: Populations Dynamics: Population Projections

description: In this study, size-based matrix models for the reef-building coral Orbicella annularis at 14-m depth on the Tektite reef in St. John, U.S. Virgin Islands, were used to: (1) explore the demography of changing coral cover over 25 yr, (2) test for spatial homogeneity in demographic properties through a contrast with a previous study (at Yawzi Point, Edmunds and Elahi 2007), and (3) evaluate the potential for future population stability. During three, five year intervals from 1988 to 2002, St. John was affected by hurricanes and bleaching, yet coral cover at Tektite increased from 33% to 49%; from 2002 to 2007, it declined to 27%; and from 2010 to 2013, it stabilized at ∼ 28%. Over a quarter-century, colonies &gt; 50 cm2 became rare, the abundance of colonies ≤ 50 cm2 increased from 58% (1988) to 92% (2013), and population density doubled to 67 colonies m-2 by 2013. Population growth (λ) was greater at Tektite (1.152 ≥ λ ≥ 1.018) than Yawzi Point (0.679 ≥ λ ≥ 0.586), and while population size at Tektite declined due to bleaching and disease in 2005 (λ = 0.753 over 2003–2008), it recovered between 2008 and 2013 (λ = 0.966); the population at Yawzi Point declined from 1988 to 2003 without signs of recovery. Projections suggest a continuation of recent conditions could allow O. annularis at Tektite to retain ∼ 9% cover after 100 yr, but with a return to the rates of growth and survival of 1993–1998, it could attain coverage similar to that of 1988 (33%) in ∼ 15 yr.
DOI: 10.6084/m9.figshare.17082470
title: Predict the incidence of Guillain Barré Syndrome and Arbovirus Infection in Mexico, 2014-2019

description: The objective of this study was to predict the number of GBS cases related to the cumulative incidence of ZIKV / DENV / CHIKV simultaneous circulating arboviruses in Mexico from 2014 to 2019. This information can be useful in public health and provides an opportunity to improve capacities for the prevention of arboviruses and supplies in the treatment of GBS. Methods: A six-year time series ecological study was carried out on cases registered in the epidemiological surveillance system as acute flaccid paralysis that were identified as GBS, and an estimation was performed of DENV, ZIKV and CHIKV cases registered as EVS vector-borne diseases.
DOI: 10.6084/m9.figshare.17082470.v1
title: Predict the incidence of Guillain Barré Syndrome and Arbovirus Infection in Mexico, 2014-2019

description: The objective of this study was to predict the number of GBS cases related to the cumulative incidence of ZIKV / DENV / CHIKV simultaneous circulating arboviruses in Mexico from 2014 to 2019. This information can be useful in public health and provides an opportunity to improve capacities for the prevention of arboviruses and supplies in the treatment of GBS. Methods: A six-year time series ecological study was carried out on cases registered in the epidemiological surveillance system as acute flaccid paralysis that were identified as GBS, and an estimation was performed of DENV, ZIKV and CHIKV cases registered as EVS vector-borne diseases.
DOI: 10.6084/m9.figshare.19209057.v1
title: Global soil methane budget and drivers in forest ecosystems

description: Dataset S1 used to construct a mixed effect model. And predicted global map (10 km resolution) of soil methane flux (kg CH<sub>4</sub> ha<sup>–1</sup> yr<sup>–1</sup>) during 1991 to 2020 in forest ecosystems.
DOI: 10.6084/m9.figshare.17005273.v13
title: BED file for Drosophila telomeric TEs and gene capture

description: *_lessfilt_genBrowser.bed: no filter on divergence; no filter on contig length; filter on telomeric hit length (&gt;=longest*0.5)<br>*_filt_genBrowser.bed: filter on divergence (&lt;= 0.3); filter with contig length (&gt;=50kb); filter with the longest hit
DOI: 10.6084/m9.figshare.19210125
title: Dataset for the paper Granular Banks and Corporate Investment

description: Dataset for the paper Granular banks and corporate investment.
DOI: 10.6073/pasta/45919925e96a842db663fd059cf5f8d0
title: Virgin Islands National Park: Coral Reef: Population Dynamics: Octocorals

description: These data are evidence of the the long-term dynamics of shallow coral reefs along the south coast of St. John from as early as 1987. These data describe coral reef community structure by density based on the analysis of color photographs. All of these data originate from color images of photoquadrats recorded annually (usually in the summer) from as early as 1987. The data falls into three groups. The two groups that are contained in this data package are (1) Tektite & Yawzi and (2) Random sites. Tektite – this is at 14 m depth on the eastern side of Great Lameshur Bay and is the original site of the Tektite man-in-the sea project in 1969; this project marked the birth of the Virgin Islands Ecological Research Station (later the Virgin Islands Environmental Resource Station) that hosts the field component of the project. The reef in this location consists of a single buttress that has remained dominated by Montastraea anularis since the start of the research (1987). These surveys consist of 30 photoquadrats (1 x 1 m) distributed along three, 10 m transects. Yawzi – this is at 9 m depth and is on the western side of Great Lameshur Bay and has been recorded photographically since 1987. This reef also started the study period dominated by Montastraea annularis, but has degraded much more rapidly that the Tektite site. These surveys consist of 30 photoquadrats (1 x 1 m) distributed along three, 10 m transects. Random sites – were added in 1992 to address the concern that the original sites (Yawzi and Tektite) were selected on “good” areas of reef and, therefore, could only decline in condition. The Random sites were selected using random coordinates in 1992, and consist of 6 sites (at 7-9 m depth) scattered between Cabritte Point and White Point. All lie a little shoreward of Yawzi and Tektite, and have always been characterized by low coral cover (&lt; 10% cover). The surveys consist of 18-40 photoquadrats (0.5 x 0.5 m; with sample size determined by the exposures on a 35 mm cassette versus digital techniques) that are placed at random points along a transect.
DOI: 10.25345/c5gq6r319
title: MassIVE Reanalysis RMSV000000354.3830 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, COG6 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5c24qn9p
title: MassIVE Reanalysis RMSV000000354.3831 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, FAM53C [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c57940v5x
title: MassIVE Reanalysis RMSV000000354.3832 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ZBP1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.3886/e163101
title: NICU II

description: Neonatal acute brain injury population: evaluation of acute exam factors in relation to biomarkers of brain health and outcomes.
DOI: 10.3886/e163101v1
title: NICU II

description: Neonatal acute brain injury population: evaluation of acute exam factors in relation to biomarkers of brain health and outcomes.
DOI: 10.6084/m9.figshare.17005273
title: BED file for Drosophila telomeric TEs and gene capture

description: *_lessfilt_genBrowser.bed: no filter on divergence; no filter on contig length; filter on telomeric hit length (&gt;=longest*0.5)<br>*_filt_genBrowser.bed: filter on divergence (&lt;= 0.3); filter with contig length (&gt;=50kb); filter with the longest hit
DOI: 10.6084/m9.figshare.17005273.v15
title: BED file for Drosophila telomeric TEs and gene capture

description: *_lessfilt_genBrowser.bed: no filter on divergence; no filter on contig length; filter on telomeric hit length (&gt;=longest*0.5)<br>*_filt_genBrowser.bed: filter on divergence (&lt;= 0.3); filter with contig length (&gt;=50kb); filter with the longest hit
DOI: 10.6084/m9.figshare.17005273.v14
title: BED file for Drosophila telomeric TEs and gene capture

description: *_lessfilt_genBrowser.bed: no filter on divergence; no filter on contig length; filter on telomeric hit length (&gt;=longest*0.5)<br>*_filt_genBrowser.bed: filter on divergence (&lt;= 0.3); filter with contig length (&gt;=50kb); filter with the longest hit
DOI: 10.25345/c53j39216
title: MassIVE Reanalysis RMSV000000354.3835 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ABHD12B [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.6084/m9.figshare.16780603
title: Processed_QC_approved_normalised_expr_GSE32269

description: Processed, QC-approved and normalised (gcrma, GcRmaBackgroundCorrection) expression data from dataset GSE32269 used in "The Transcriptomic Landscape of Prostate Cancer Development and Progression: An Integrative Analysis" study (https://pubmed.ncbi.nlm.nih.gov/33477882/).
DOI: 10.6084/m9.figshare.16780603.v2
title: Processed_QC_approved_normalised_expr_GSE32269

description: Processed, QC-approved and normalised (gcrma, GcRmaBackgroundCorrection) expression data from dataset GSE32269 used in "The Transcriptomic Landscape of Prostate Cancer Development and Progression: An Integrative Analysis" study (https://pubmed.ncbi.nlm.nih.gov/33477882/).
DOI: 10.6084/m9.figshare.16780603.v1
title: Processed_QC_approved_normalised_expr_GSE32269

description: Processed, QC-approved and normalised (gcrma, GcRmaBackgroundCorrection) expression data from dataset GSE32269 (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE32269) used in "The Transcriptomic Landscape of Prostate Cancer Development and Progression: An Integrative Analysis" study.
DOI: 10.25345/c5zs2kd66
title: MassIVE Reanalysis RMSV000000354.3833 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, CADM1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5v11vm2c
title: MassIVE Reanalysis RMSV000000354.3834 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, LRTOMT [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5q814s80
title: MassIVE Reanalysis RMSV000000354.3836 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, TXLNA [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5281/zenodo.6209607
title: Olivaichthys viedmensis decontaminated FSCR

description: .
DOI: 10.5281/zenodo.6209606
title: Olivaichthys viedmensis decontaminated FSCR

description: .
DOI: 10.6073/pasta/66c444bf51f1699d647dce50456dbba7
title: Virgin Islands National Park: Coral Reef: Reference: Geography

description: This is a reference dataset containing the site locations, year established, and types of surveys.
DOI: 10.25345/c5kh0f048
title: MassIVE Reanalysis RMSV000000354.3839 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, CDK9 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5ft8dk4c
title: MassIVE Reanalysis RMSV000000354.3837 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ARHGAP17 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5b27ps0j
title: MassIVE Reanalysis RMSV000000354.3838 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, TNFAIP8L2 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5696zz6s
title: MassIVE Reanalysis RMSV000000354.3840 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ALPK1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.6084/m9.figshare.3761562.v2136
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6073/pasta/dbb2eef00a899024feb6112f7a3087d6
title: Virgin Islands National Park: Coral Reef: Reference: Taxonomy

description: In early years photos were analyzed with less refined taxonomic classsification. This reference table may be used to aggregate taxa to align with coarse analysis. Use this table to define sub-categories and super-categories such as the M. annularis complex. This is a reference dataset containing the taxonomic classifications, groupings of taxonomic classifications, and functional groups. It has been updated in accordance with Budd, et al., 2012.
DOI: 10.34740/kaggle/dsv/3211777
title: QURAN English
DOI: 10.18112/openneuro.ds002241.v1.1.1
title: Relating visual production and recognition of objects in human visual cortex
DOI: 10.25345/c52j6852f
title: MassIVE Reanalysis RMSV000000354.3841 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, DUSP14 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.6073/pasta/c69935f8d4909969082381bc7c45a759
title: Virgin Islands National Park: Coral Reef: Population Dynamics: Landscape-scale Variation in Scleractinian Corals

description: This study provides a landscape-scale context to a decadal-scale analysis of community structure on shallow reefs along 4 km of the south shore of St. John, US Virgin Islands. By focusing on 12-14 sites along ~100 km of the shores of St. John and St. Thomas, surveys conducted in 2011 were used to contrast: (1) a local-scale with a landscape-scale analysis on two islands, (2) reefs around St. John and St. Thomas, and (3) reefs on north and south shores. Reefs were censused using photoquadrats that were analyzed for percentage cover first by functional groups (coral, macraolagae and CTB), and then by coral genus. In general, among-site variation for the coarse-resolution analysis eclipsed shore and island effects, but the fine-resolution analysis revealed strong site-specific differences for multiple coral genera that could be the product of priority effects in community succession. Over the next decade these differences probably will create unique community trajectories at each site.
DOI: 10.25345/c5xs5jh7f
title: MassIVE Reanalysis RMSV000000354.3843 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, CAMLG [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5t14tq24
title: MassIVE Reanalysis RMSV000000354.3846 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, VAC14 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5p843w8r
title: MassIVE Reanalysis RMSV000000354.3847 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, STK17B [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5jm23g8t
title: MassIVE Reanalysis RMSV000000354.3844 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ARL11 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.