cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.q2efxw
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chersobius signatus",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation)"
 ]
}

 The dataset includes 63 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008102-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25934/pr00012525.0
title: Available datapackage for study 'Minimal False-Alarm Touch-Based Detection of SARS-CoV-2 Virus Particles Using Poly-Aptamers'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.15468/dl.6vfjgb
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gongylosciadium falcarioides",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008104-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18345749
title: Supplemental Information for "Temporal variability in midwater zooplankton follows depth-dependent patterns in the Eastern Tropical Pacific"

description: These files report Supplemental tables for the manuscript "Temporal variability in midwater zooplankton follows depth-dependent patterns in the Eastern Tropical Pacific", with authors Cazares-Nuesser AE, Ellis GN, Tosten J, Yamada M, Dowd M, Drazen JC, Goetze E (Limnology and Oceanography, in review). Supplemental Tables S7 and S8 report results of SIMPER analyses to assess community dissimilarity between fall and spring midwater zooplankton assemblages over the Clarion Clipperton Zone (CCZ) NORI-D exploration license. Supplemental Tables S9 and S10 report BLAST results to assess the accuracy of taxonomic classification of reads that derive from metabarcoding of zooplankton assemblages at the COI and 18S rDNA markers (9 depth-stratified nets, 1m2 MOCNESS collections).  Additional data files for integrated zooplankton biomass and metadata for all 1m2 MOCNESS tows are also included.
DOI: 10.5281/zenodo.18345750
title: Supplemental Information for "Temporal variability in midwater zooplankton follows depth-dependent patterns in the Eastern Tropical Pacific"

description: These files report Supplemental tables for the manuscript "Temporal variability in midwater zooplankton follows depth-dependent patterns in the Eastern Tropical Pacific", with authors Cazares-Nuesser AE, Ellis GN, Tosten J, Yamada M, Dowd M, Drazen JC, Goetze E (Limnology and Oceanography, in review). Supplemental Tables S7 and S8 report results of SIMPER analyses to assess community dissimilarity between fall and spring midwater zooplankton assemblages over the Clarion Clipperton Zone (CCZ) NORI-D exploration license. Supplemental Tables S9 and S10 report BLAST results to assess the accuracy of taxonomic classification of reads that derive from metabarcoding of zooplankton assemblages at the COI and 18S rDNA markers (9 depth-stratified nets, 1m2 MOCNESS collections).  Additional data files for integrated zooplankton biomass and metadata for all 1m2 MOCNESS tows are also included.
DOI: 10.15468/dl.hdrdhp
title: Occurrence Download

description: A dataset listing the 132 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "ClassKey is one of (Amphibia)",
 "Country is Chile"
 ]
}

 The dataset's 132 records were derived from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008093-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.anrv6y
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chersobius solus",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation)"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008106-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aa33wf
title: Occurrence Download

description: A dataset containing 2758 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (United Kingdom of Great Britain and Northern Ireland, Isle of Man, Ireland)",
 "Geometry POLYGON((-13.12142 45.37017,6.20169 45.37017,6.20169 63.90992,-13.12142 63.90992,-13.12142 45.37017))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lagopus lagopus scotica",
 "Year 1980-2026"
 ]
}

 The dataset includes 2758 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008105-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dxjfc8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gravia",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008107-260120142942310/datasets/export for details.
DOI: 10.15468/dl.kc6pva
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Grammosciadium scabridum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 10 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008109-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d9ezye
title: Occurrence Download

description: A dataset containing 359 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geochelone elegans",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation)"
 ]
}

 The dataset includes 359 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008108-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3taa6h
title: Occurrence Download

description: A dataset containing 83731 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alburnus alburnus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2005",
 "Year is less than or equal to 2009"
 ]
}

 The dataset includes 83731 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008081-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9tcgp7
title: Occurrence Download

description: A dataset containing 6105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Alsodes australis, Alsodes barrioi, Alsodes cantillanensis, Alsodes gargola, Alsodes hugoi, Alsodes igneus, Alsodes kaweshkari, Alsodes laevis, Alsodes montanus, Alsodes monticola, Alsodes nodosus, Alsodes norae, Alsodes pehuenche, Alsodes tumultuosus, Alsodes valdiviensis, Alsodes vanzolinii, Alsodes verrucosus, Alsodes vittatus, Atelognathus ceii, Atelognathus salai, Batrachyla antartandica, Batrachyla leptopus, Batrachyla nibaldoi, Batrachyla taeniata, Calyptocephalella gayi, Chaltenobatrachus grandisonae, Eupsophus altor, Eupsophus calcaratus, Eupsophus contulmoensis, Eupsophus emiliopugini, Eupsophus insularis, Eupsophus migueli, Eupsophus nahuelbutensis, Eupsophus roseus, Eupsophus septentrionalis, Eupsophus vertebralis, Hylorina sylvatica, Insuetophrynus acarpicus, Nannophryne variegata, Pleurodema bufoninum, Pleurodema marmoratum, Pleurodema thaul, Rhinella arunco, Rhinella atacamensis, Rhinella rubropunctata, Rhinella spinulosa, Rhinoderma darwinii, Rhinoderma rufum, Telmatobius chusmisensis, Telmatobius dankoi, Telmatobius fronteriensis, Telmatobius halli, Telmatobius marmoratus, Telmatobius pefauri, Telmatobius peruvianus, Telmatobius philippii, Telmatobius vilamensis, Telmatobius zapahuirensis, Telmatobufo australis, Telmatobufo bullocki, Telmatobufo ignotus, Telmatobufo venustus)",
 "HasCoordinate is true",
 "Country is Chile",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6105 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008110-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hgfpf9
title: Occurrence Download

description: A dataset containing 705010 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Odocoileus virginianus, Peromyscus leucopus, Peromyscus maniculatus, Tamias striatus, Blarina brevicauda, Tamiasciurus hudsonicus, Sciurus carolinensis, Procyon lotor, Mephitis mephitis)",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-125 25, -66 25, -66 49, -125 49, -125 25))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 705010 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008099-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9m5h2u
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyclura portoricensis"
 ]
}

 The dataset includes 14 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008112-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.avbjaw
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gymnophyton polycephalum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 73 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008113-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.czvx2c
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Geochelone platynota",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation)"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008114-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xpv2kr
title: Occurrence Download

description: A dataset containing 152519 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen)",
 "Geometry POLYGON((-157.09 59.07,-138.23 59.07,-138.23 63.5,-157.09 63.5,-157.09 59.07))",
 "License is one of (CC-BY-NC 4.0, CC-BY 4.0, CC0 1.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 152519 records from 242 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008045-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/0ca11f1f7f5ae6692b036c5f88c507bf
title: Cone Pond Watershed: Soil Profiles (Pedons), 1988-2023

description: Cone Pond Watershed: Soil Profiles (Pedons), 1988-2023
 This dataset documents pedons (soil profiles) sampled at Cone Pond Watershed, Thornton, New Hampshire. Since the early 1980’s, Cone Pond, on the Pemigewasset District of the White Mountain National Forest, has been an active research satellite site to the nearby Hubbard Brook Experimental Forest. In 1988, intensive monitoring began as part of a comprehensive watershed scale ecosystem study. A weir was built on the main inlet stream, just above its mouth at Cone Pond, to monitor streamflow. Two rain gages were installed to monitor atmospheric deposition and multiple studies of major ecosystem components were initiated. Soil profiles documented in this dataset were sampled between 1988 and 2003. All descriptive profile and horizon data as well as chemical analyses of samples of genetic horizons are included in this dataset. Samples from 123 of these horizons have been accessioned into the Hubbard Brook physical sample archive; the archived mass of each is included in the horizon table. In addition to these pedons sampled in detail, a number of reconnaissance observations, made at a lower level of detail, and without sampling, were made in 2023 in order to validate a hydropedologic soil model created at Hubbard Brook. These data are included in a separate table.
 These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.
DOI: 10.6073/pasta/e413be5a20ef9cf5344c7d7855a71c70
title: Hubbard Brook Experimental Forest: Soil Profiles (Pedons), 1995-2022

description: This dataset documents all pedons (soil profiles) that have been located with GPS (2 meter horizontal accuracy) and have been described by genetic horizon for the Hubbard Brook Experimental Forest, within the White Mountain National Forest, NH.
 
 Soil profiles were observed between 1995 and 2022 and have been described and sampled at two levels of detail. Soil profiles in the pedon table were dug to bedrock or into the C horizon except where high boulder content limited excavation. The depth of all major soil horizons was measured and most pedons had descriptions written and physical samples collected. The horizon table contains physical observations and chemical analyses for the horizons sampled in the pedon table. Over 2500 of these horizons have had physical samples accessioned into the Hubbard Brook sample archive; the archived mass is included in the horizon table.
 
 The reconnaissance table includes pedons observed at a lower level of detail. Small pits were generally dug to a depth of 40 cm or greater, and minimal observations, as needed, were recorded to classify the soil profile by soil map unit (hpu). These data were collected to supplement the detailed observations in the previous two data tables in support of development of a spatial model of soil distribution for the entire Hubbard Brook Experimental Forest. No samples were collected from reconnaissance pits.
 
 These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.
DOI: 10.15468/dl.ggkvvx
title: Occurrence Download

description: A dataset containing 2657 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gopherus agassizii",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation)"
 ]
}

 The dataset includes 2657 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008116-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6b66xf
title: Occurrence Download

description: A dataset containing 3979 records in GBIF matching the query:
SELECT
 '202' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= 4.045127286108716
 AND decimalLatitude &lt;= 8.098015256935714
 AND decimalLongitude &gt;= 94.93482021404367
 AND decimalLongitude &lt;= 100.39662929106858
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 3979 records were derived from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008103-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kmmudc
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hansenia phaea",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 19 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008117-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/8bb6c7ed61c696535547b3e009ecf8f6
title: Ecosystem nutrient cycling in northern hardwood and conifer stands at Cone Pond, Hubbard Brook, and Sleepers River

description: This dataset provides comprehensive measurements of nutrient concentrations and fluxes in foliage, fine roots, wood, litterfall, and throughfall in hardwood and conifer stands across temperate forest stands at three long-term ecological research sites in the northeastern United States: Cone Pond, NH, Hubbard Brook, NH, and Sleepers River, VT. These sites vary in bedrock composition, parent material, and soil chemistry, but share similar climatic characteristics. Tissue nutrient concentrations were determined in leaves, fine roots, wood, and branches using site- and tissue-specific methods, with additional quality control through certified standards and duplicate sampling. Nutrient fluxes via litterfall and throughfall were measured over multiple years. Nutrient fluxes in roots were estimated from minirhizotron-based turnover rates and fine root biomass. Annual nutrient accumulation and uptake were calculated by integrating biomass production and nutrient concentrations. This dataset supports cross-site comparisons of forest biogeochemistry and provides a basis for evaluating nutrient limitations, cycling processes, and ecosystem responses to environmental gradients in northeastern temperate forests.
DOI: 10.15468/dl.qfehwf
title: Occurrence Download

description: A dataset containing 223276 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tetrao urogallus",
 "Country is one of (Albania, Austria, Bosnia and Herzegovina, Belgium, Bulgaria, Belarus, Switzerland, Cyprus, Czechia, Germany, Denmark, Estonia, Spain, Finland, France, United Kingdom of Great Britain and Northern Ireland, Greece, Croatia, Hungary, Ireland, Italy, Lithuania, Luxembourg, Latvia, Moldova, Republic of, Montenegro, North Macedonia, Malta, Netherlands, Norway, Poland, Portugal, Romania, Serbia, Sweden, Slovenia, Slovakia, Türkiye, Ukraine, Kosovo)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 223276 records from 261 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008082-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nzrzeh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((3.48129653262248 46.298985416650346, 3.4799017552329397 46.307727605612456, 3.476071872966527 46.316113210310284, 3.4699530401533534 46.32381971306566, 3.4617797280712446 46.33055057037604, 3.4518658171827408 46.336046667813896, 3.4405925681234684 46.34009634641921, 3.428393928495847 46.34254360478836, 3.415739746370609 46.34329415124851, 3.4031175523826644 46.34231906480113, 3.3910136352920173 46.33965591843037, 3.379894167197521 46.33540731978803, 3.3701871323857073 46.32973692769376, 3.3622657781996 46.32286310370596, 3.3564342394301465 46.31505045176679, 3.352915893446221 46.30659958156046, 3.3518448868837543 46.29783549935174, 3.3532611424506387 46.28909508109446, 3.3571090129403998 46.280714114833174, 3.363239605481367 46.27301441208715, 3.371416658480705 46.26629148112016, 3.381325721948429 46.260803229646086, 3.3925862732183645 46.25676012214772, 3.404766297809022 46.25431715963612, 3.417398781623364 46.25356797977783, 3.4299994974043186 46.25454129551825, 3.442085426260627 46.25719980344776, 3.453193134641427 46.261441602076246, 3.462896428566942 46.267104067825464, 3.470822630203471 46.27397004585158, 3.4766668667732556 46.281776126688555, 3.4802038277800458 46.290222701041785, 3.48129653262248 46.298985416650346))",
 "KingdomKey is one of (Animalia, Fungi, Plantae)",
 "Year is one of (2016, 2017, 2018, 2019, 2020, 2021, 2022, 2023, 2024, 2025, 2026)",
 "Modified is greater than or equal to 2026-01-13"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008118-260120142942310/datasets/export for details.
DOI: 10.5281/zenodo.18355830
title: weecology/EvergladesWadingBird: 3.0.0

description: v3.0.0
DOI: 10.5281/zenodo.18355476
title: Supporting data for: HGTScanner: Detecting horizontal gene transfer and mitochondrial plastid DNA (MTPT) at the fine scale using whole organelle genomes

description: Appendix S4 for HGTScanner: Detecting horizontal gene transfer and mitochondrial plastid DNA (MTPT) at the fine scale using whole organelle genomes

Input and output files of HGTScanner analyses performed in the current study. This included mitochondrial plastid DNA (MTPT) characterization in Mannagettaea hummelii, Aeginetia indica, Alectra sessiliflora, and Rehmannia glutinosa; MTPT and HGT characterization in Amborella trichopoda; and assessment of moss and algae donors of Amborella HGTs using concatenated sequences of A-D and M genomes in IQ-TREE.