cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5776286
title: TCV-X21: a FAIR dataset of TCV experimental results for validating edge/divertor turbulence models

description: <strong>A FAIR dataset of TCV experimental results for validating edge/divertor turbulence models.</strong> This repository is designed to let you perform the analysis presented in <em>Oliveira and Body et. al., Nuclear Fusion, 2022</em>, both using the data given in the paper, and with a turbulence simulation of your own. We hope that, by providing the analysis, the TCV-X21 case can be used as a standard validation and bench-marking case for turbulence simulations of the divertor in fusion experiments. The repository allows you to scrutinise and suggest improvements to the analysis (there's always room for improvement), to directly interact with and explore the data in greater depth than is possible in a paper, and — we hope — use this case to test a simulation of your own. This Zenodo repository preserves the exact version (Version 1.0.0) of the repository used to publish the paper. We will also use Zenodo to release citable versions of the repository containing additional data. For getting started with the project, we suggest to start with the GitHub repository (https://github.com/SPCData/TCV-X21) and use issues to ask about anything that is not clear. If you have new experimental data or simulations of the scenario, make a merge request in GitHub and we can make a new release including your data.
description: If you use the TCV-X21 validation case, please cite the paper "Validation of edge turbulence codes against the TCV-X21 diverted L-mode reference case" by Oliveira and Body et al., 2022, published in Nuclear Fusion. You can find a link to the Open Access article in the repository https://github.com/SPCData/TCV-X21, and can get a formatted citation by clicking "Cite this repository" on GitHub.
DOI: 10.34816/efa.archives.364030
title: Philippes-L6331-012A-Lampe en argile moulé, fragment

description: Référence : L6331-012A<br />Publication(s) : Inédit<br />Domaine : Vase<br />
DOI: 10.34816/efa.archives.364029
title: Philippes-L6331-011A-Lampe en argile moulé, fragment

description: Référence : L6331-011A<br />Publication(s) : Inédit<br />Domaine : Vase<br />
DOI: 10.34816/efa.archives.364028
title: Philippes-L6331-010A-Lampe en argile moulé, fragment

description: Référence : L6331-010A<br />Publication(s) : Inédit<br />Domaine : Vase<br />
DOI: 10.17026/dans-z7g-9wek
title: Digital Phenotyping via Social Media Content 2

description: The research project associated with this dataset focuses on the analysis of the top threads within the ddo subreddit. The dataset contains essential information about each of these threads, including the author's username, the post's title, the post text, its score, and the number of comments it has received. Additionally, it includes a detailed record of all comments within each thread, encompassing the commenter's username, the date and time of their comment, and the score received by each comment.The purpose of this project is to recognize addicted users within the ddo subreddit community by considering their activity patterns, emotional expressions, and content preferences, ultimately contributing to a deeper understanding of addiction-related behaviors in online communities and informing strategies for tailored support and interventions.
DOI: 10.34816/efa.archives.364027
title: Philippes-L6331-009A-Lampe en argile moulé, fragment

description: Référence : L6331-009A<br />Publication(s) : Inédit<br />Domaine : Vase<br />
DOI: 10.34816/efa.archives.364026
title: Philippes-L6331-008A-Lampe en argile moulé, fragment

description: Référence : L6331-008A<br />Publication(s) : Inédit<br />Domaine : Vase<br />
DOI: 10.34816/efa.archives.364025
title: Philippes-L6331-004A-Lampe en argile moulé, fragment

description: Référence : L6331-004A<br />Publication(s) : Inédit<br />Domaine : Vase<br />
DOI: 10.34816/efa.archives.364024
title: Philippes-L6331-002A-Lampe en argile moulé, fragment

description: Référence : L6331-002A<br />Publication(s) : Inédit<br />Domaine : Vase<br />
DOI: 10.34816/efa.archives.364023
title: Philippes-L6331-001A-Lampe en argile moulé, fragment

description: Référence : L6331-001A<br />Publication(s) : Inédit<br />Domaine : Vase<br />
DOI: 10.15468/dl.78yq7p
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lithocarpus lampadarius (Gamble) A.Camus"
 ]
}

 The dataset includes 67 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048803-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/dans-z7h-2526
title: Anansi Masters - Curacao G07 - Sling, Rose Marie, Nana Rosa - How Nanzi tricked the Devil

description: How Nanzi tricked the Devil told by Rose Marie Sling (Nana Rosa), recorded on video for the Anansi Masters project in Curacao.Subject: How Nanzi tricked the DevilDescription: Nanzi gets an impossible mission but his wit helps him to accomplish it.Content: Nanzi does not want to give up his life of luxury, but his money is running out. Then the Devil strikes a deal with him. Nanzi can keep a flute that fulfills all his wishes on the condition that within fourteen days Nanzi knows for how long the Devil has been on earth. Nanzi enjoys the benefits of the flute and manages to keep it by tricking the Devil.About Anansi Masters: The Anansi Masters project is developed by Vista Far Reaching Visuals (Mr. Jean Hellwig) and partners. It is designed as a public digital platform at http://www.anansimasters.net and opened in 2007. At the website one can find information about the story character of Nanzi (or Anansi or Kweku Ananse), with English and Dutch subtitled video recordings of storytelling in several countries in different languages, educational modules about storytelling for use at schools and academies, and digital issues of the Anansi Masters Journal published since the beginning of the project. All storytelling videos are also published on Youtube.The stories of the Anansi tradition originate in Africa and were exported to other parts of the world through slave trade and migration. In Anansi Masters, the similarities and differences between the stories and storytellers, who tell in their own language, can be found. Anansi Masters initiates different activities all over the world where stories from this oral tradition can be found. The founder has the ambition to film as many stories from this tradition as possible in as many countries as possible. Anansi Masters collaborates with writers, theatre makers, filmmakers, researchers, schools and of course with many many storytellers.This dataset refers to:- the video recording of the storytelling with English subtitles- the video recording of the storytelling with Dutch subtitles- the video recording of the short interview with the storyteller with English subtitles- the video recording of the short interview with the storyteller with Dutch subtitles- a text datasheet with information about the stortyteller and story in English and Dutch
DOI: 10.34816/efa.archives.364022
title: Philippes-L6331-000A-Lampe en argile moulé, fragment

description: Référence : L6331-000A<br />Publication(s) : Inédit<br />Domaine : Vase<br />
DOI: 10.34816/efa.archives.364021
title: Philippes-L6331-003A-Lampe en argile moulé, complet

description: Référence : L6331-003A<br />Publication(s) : Inédit<br />Domaine : Vase<br />
DOI: 10.34816/efa.archives.364020
title: Philippes-L6340-017-INSCRIPTION, MUR OUEST SONDAGE A

description: Référence : L6340-017<br />Publication(s) : Inédit<br />Domaine : Épigraphie<br />
DOI: 10.34816/efa.archives.364019
title: Philippes-L6340-016-INSCRIPTION, MUR OUEST SONDAGE A

description: Référence : L6340-016<br />Publication(s) : Inédit<br />Domaine : Épigraphie<br />
DOI: 10.34816/efa.archives.364018
title: Philippes-L8086-011-INSCRIPTION, SUPPORT : MONUMENT HONORIPHIQUE

description: Référence : L8086-011<br />Publication(s) : Inédit<br />Domaine : Épigraphie<br />
DOI: 10.15468/dl.hn4w55
title: Occurrence Download

description: A dataset containing 408426 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Luzula campestris (L.) DC."
 ]
}

 The dataset includes 408426 records from 1877 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048777-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.5723158
title: Fig. 1. Intra- and inter-specific variation in RGH1, RGH2, and RGH3

description: Protein sequence used to establish protein domains.<br>
DOI: 10.6084/m9.figshare.5723158.v1
title: Fig. 1. Intra- and inter-specific variation in RGH1, RGH2, and RGH3

description: Protein sequence used to establish protein domains.<br>
DOI: 10.6084/m9.figshare.5723110.v1
title: NLStdEos_TL3_Pos51.lif

description: See accompanying word documents<br><br>
DOI: 10.6084/m9.figshare.5723110
title: Timelapse 3 - raw confocal files 2

description: See accompanying word documents<br><br>
DOI: 10.6084/m9.figshare.5723041
title: Data to to test website

description: Data to test website<br>
DOI: 10.6084/m9.figshare.5723041.v1
title: Data to to test website

description: Data to test website<br>
DOI: 10.6084/m9.figshare.5723017
title: HSPA5 negatively regulates lysosomal activity through ubiquitination of MUL1 in head and neck cancer

description: HSPA5/GRP78/BiP plays an important role in cell survival or tumor progression. For these reasons, HSPA5 is an emerging therapeutic target in cancer development. Here we report that HSPA5 contributes to head and neck cancer (HNC) survival via maintenance of lysosomal activity; however, a nonthermal plasma (NTP, considered as a next-generation cancer therapy)-treated solution (NTS) inhibits HNC progression through HSPA5-dependent alteration of lysosomal activity. HSPA5 prevents NTS-induced lysosome inhibition through lysosomal-related proteins or regulation of gene expression. However, NTS-induced MUL1/MULAN/GIDE/MAPL (mitochondrial ubiquitin ligase activator of NFKB 1) leads to downregulation of HSPA5 via K48-linked ubiquitination at the lysine 446 (K446) residue. <i>MUL1</i> knockdown hinders NTS-induced lysosome inhibition or cytotoxicity through the reduction of HSPA5 ubiquitination in HNC cells. While MUL1 was suppressed, HSPA5 was overexpressed in tissues of HNC patients. NTS strongly inhibited HNC progression via alterations of expression of MUL1 and HSPA5, in vivo in a xenograft model. However, NTS did not induce inhibition of tumor progression or HSPA5 reduction in <i>MUL1</i> knockout (KO) HNC cells which were generated by CRISPR/Cas9 system. The data provide compelling evidence to support the idea that the regulation of the MUL1-HSPA5 axis can be a novel strategy for the treatment of HNC.
DOI: 10.6084/m9.figshare.5723017.v1
title: HSPA5 negatively regulates lysosomal activity through ubiquitination of MUL1 in head and neck cancer

description: HSPA5/GRP78/BiP plays an important role in cell survival or tumor progression. For these reasons, HSPA5 is an emerging therapeutic target in cancer development. Here we report that HSPA5 contributes to head and neck cancer (HNC) survival via maintenance of lysosomal activity; however, a nonthermal plasma (NTP, considered as a next-generation cancer therapy)-treated solution (NTS) inhibits HNC progression through HSPA5-dependent alteration of lysosomal activity. HSPA5 prevents NTS-induced lysosome inhibition through lysosomal-related proteins or regulation of gene expression. However, NTS-induced MUL1/MULAN/GIDE/MAPL (mitochondrial ubiquitin ligase activator of NFKB 1) leads to downregulation of HSPA5 via K48-linked ubiquitination at the lysine 446 (K446) residue. <i>MUL1</i> knockdown hinders NTS-induced lysosome inhibition or cytotoxicity through the reduction of HSPA5 ubiquitination in HNC cells. While MUL1 was suppressed, HSPA5 was overexpressed in tissues of HNC patients. NTS strongly inhibited HNC progression via alterations of expression of MUL1 and HSPA5, in vivo in a xenograft model. However, NTS did not induce inhibition of tumor progression or HSPA5 reduction in <i>MUL1</i> knockout (KO) HNC cells which were generated by CRISPR/Cas9 system. The data provide compelling evidence to support the idea that the regulation of the MUL1-HSPA5 axis can be a novel strategy for the treatment of HNC.
DOI: 10.6084/m9.figshare.5723005
title: Appendix 4-figure 9A Opsin gene tree

description: Opsin Maximum likelihood (ML) tree. Collected opsin sequences were multiple sequence aligned with MAFFT L-INS-i[163] with default parameters. Gaps and ambiguous sequences were filtered with trimAL software[304] (parameter: -gt =0.5), and the ML tree reconstructed with MEGA7[252] with LG+G (5 gamma categories (+G, parameter = 1.3856) substitution model using 362 aa of multiple amino acid alignment. 100 bootstrap replicates were performed. HsapGPR was used as the outgroup sequence. Black circles on each node indicate bootstrap values. Scale bar equals substitutions per site. Taxon abbreviation: Hsap: Homo sapiens, Mnem: Mnemiopsis leidyi Agam: Anopheles gambiae, Sfre: Sympetrum frequens, Ilum: Ignelater luminosus, Bmor: Bombyx mori, Ppyr: Photinus pyralis, Tcas: Tribolium castaneum, Dmel: Drosophila melanogaster.<br>
DOI: 10.6084/m9.figshare.5723005.v1
title: Appendix 4-figure 9A Opsin gene tree

description: Opsin Maximum likelihood (ML) tree. Collected opsin sequences were multiple sequence aligned with MAFFT L-INS-i[163] with default parameters. Gaps and ambiguous sequences were filtered with trimAL software[304] (parameter: -gt =0.5), and the ML tree reconstructed with MEGA7[252] with LG+G (5 gamma categories (+G, parameter = 1.3856) substitution model using 362 aa of multiple amino acid alignment. 100 bootstrap replicates were performed. HsapGPR was used as the outgroup sequence. Black circles on each node indicate bootstrap values. Scale bar equals substitutions per site. Taxon abbreviation: Hsap: Homo sapiens, Mnem: Mnemiopsis leidyi Agam: Anopheles gambiae, Sfre: Sympetrum frequens, Ilum: Ignelater luminosus, Bmor: Bombyx mori, Ppyr: Photinus pyralis, Tcas: Tribolium castaneum, Dmel: Drosophila melanogaster.<br>
DOI: 10.6084/m9.figshare.5722954.v1
title: NLStdEos_TL3_Pos40.lif

description: See accompanying word documents<br><br>
DOI: 10.6084/m9.figshare.5722954
title: Timelapse 3 - raw confocal files 1

description: See accompanying word documents<br><br>
DOI: 10.6084/m9.figshare.5722954.v2
title: NLStdEos_TL3_Pos40.lif

description: See accompanying word documents<br><br>
DOI: 10.6084/m9.figshare.5722942
title: Dose painting of prostate cancer based on Gleason score correlations with apparent diffusion coefficients

description: <b>Background:</b> Gleason scores for prostate cancer correlates with an increased recurrence risk after radiotherapy (RT). Furthermore, higher Gleason scores correlates with decreasing apparent diffusion coefficient (ADC) data from diffusion weighted MRI (DWI-MRI). Based on these observations, we present a formalism for dose painting prescriptions of prostate volumes based on ADC images mapped to Gleason score driven dose-responses. <b>Methods:</b> The Gleason score driven dose-responses were derived from a learning data set consisting of pre-RT biopsy data and post-RT outcomes for 122 patients treated with a homogeneous dose to the prostate. For a test data set of 18 prostate cancer patients with pre-RT ADC images, we mapped the ADC data to the Gleason driven dose-responses by using probability distributions constructed from published Gleason score correlations with ADC data. We used the Gleason driven dose-responses to optimize dose painting prescriptions that maximize the tumor control probability (TCP) with equal average dose as for the learning sets homogeneous treatment dose. <b>Results:</b> The dose painting prescriptions increased the estimated TCP compared to the homogeneous dose by 0–51% for the learning set and by 4–30% for the test set. The potential for individual TCP gains with dose painting correlated with increasing Gleason score spread and larger prostate volumes. The TCP gains were also found to be larger for patients with a low expected TCP for the homogeneous dose prescription. <b>Conclusions:</b> We have from retrospective treatment data demonstrated a formalism that yield ADC driven dose painting prescriptions for prostate volumes that potentially can yield significant TCP increases without increasing dose burdens as compared to a homogeneous treatment dose. This motivates further development of the approach to consider more accurate ADC to Gleason mappings, issues with delivery robustness of heterogeneous dose distributions, and patient selection criteria for design of clinical trials.
DOI: 10.6084/m9.figshare.5722942.v1
title: Dose painting of prostate cancer based on Gleason score correlations with apparent diffusion coefficients

description: <b>Background:</b> Gleason scores for prostate cancer correlates with an increased recurrence risk after radiotherapy (RT). Furthermore, higher Gleason scores correlates with decreasing apparent diffusion coefficient (ADC) data from diffusion weighted MRI (DWI-MRI). Based on these observations, we present a formalism for dose painting prescriptions of prostate volumes based on ADC images mapped to Gleason score driven dose-responses. <b>Methods:</b> The Gleason score driven dose-responses were derived from a learning data set consisting of pre-RT biopsy data and post-RT outcomes for 122 patients treated with a homogeneous dose to the prostate. For a test data set of 18 prostate cancer patients with pre-RT ADC images, we mapped the ADC data to the Gleason driven dose-responses by using probability distributions constructed from published Gleason score correlations with ADC data. We used the Gleason driven dose-responses to optimize dose painting prescriptions that maximize the tumor control probability (TCP) with equal average dose as for the learning sets homogeneous treatment dose. <b>Results:</b> The dose painting prescriptions increased the estimated TCP compared to the homogeneous dose by 0–51% for the learning set and by 4–30% for the test set. The potential for individual TCP gains with dose painting correlated with increasing Gleason score spread and larger prostate volumes. The TCP gains were also found to be larger for patients with a low expected TCP for the homogeneous dose prescription. <b>Conclusions:</b> We have from retrospective treatment data demonstrated a formalism that yield ADC driven dose painting prescriptions for prostate volumes that potentially can yield significant TCP increases without increasing dose burdens as compared to a homogeneous treatment dose. This motivates further development of the approach to consider more accurate ADC to Gleason mappings, issues with delivery robustness of heterogeneous dose distributions, and patient selection criteria for design of clinical trials.
DOI: 10.6084/m9.figshare.5722933
title: Infrared observation of OC-C<sub>2</sub>H<sub>2</sub>, OC-(C<sub>2</sub>H<sub>2</sub>)<sub>2</sub> and their isotopologues

description: The fundamental band for the OC-C<sub>2</sub>H<sub>2</sub> dimer and two combination bands involving the intermolecular bending modes ν<sub>9</sub> and ν<sub>8</sub> in the carbon monoxide CO stretch region are re-examined. Spectra are obtained using a pulsed supersonic slit jet expansion probed with a mode-hop free tuneable infrared quantum cascade laser. Analogous bands for OC-C<sub>2</sub>D<sub>2</sub> and the fundamental for OC–DCCH as an impurity are also observed and analysed. A much weaker band in the same spectral region is assigned to a new mixed trimer, CO-(C<sub>2</sub>H<sub>2</sub>)<sub>2</sub>. The trimer band is composed uniquely of <i>a</i>-type transitions, establishing that the CO monomer is nearly aligned with the <i>a</i>-inertial axis. The observed rotational constants agree well with <i>ab initio</i> calculations and a small inertial defect value indicates that the trimer is planar. The structure is a compromise between the T-shaped structure of free acetylene dimer and the linear geometry of free OC-C<sub>2</sub>H<sub>2.</sub> A similar band for the fully deuterated isotopologue CO-(C<sub>2</sub>D<sub>2</sub>)<sub>2</sub> confirms our assignment.
DOI: 10.6084/m9.figshare.5722933.v1
title: Infrared observation of OC-C<sub>2</sub>H<sub>2</sub>, OC-(C<sub>2</sub>H<sub>2</sub>)<sub>2</sub> and their isotopologues

description: The fundamental band for the OC-C<sub>2</sub>H<sub>2</sub> dimer and two combination bands involving the intermolecular bending modes ν<sub>9</sub> and ν<sub>8</sub> in the carbon monoxide CO stretch region are re-examined. Spectra are obtained using a pulsed supersonic slit jet expansion probed with a mode-hop free tuneable infrared quantum cascade laser. Analogous bands for OC-C<sub>2</sub>D<sub>2</sub> and the fundamental for OC–DCCH as an impurity are also observed and analysed. A much weaker band in the same spectral region is assigned to a new mixed trimer, CO-(C<sub>2</sub>H<sub>2</sub>)<sub>2</sub>. The trimer band is composed uniquely of <i>a</i>-type transitions, establishing that the CO monomer is nearly aligned with the <i>a</i>-inertial axis. The observed rotational constants agree well with <i>ab initio</i> calculations and a small inertial defect value indicates that the trimer is planar. The structure is a compromise between the T-shaped structure of free acetylene dimer and the linear geometry of free OC-C<sub>2</sub>H<sub>2.</sub> A similar band for the fully deuterated isotopologue CO-(C<sub>2</sub>D<sub>2</sub>)<sub>2</sub> confirms our assignment.
DOI: 10.6084/m9.figshare.5722930.v1
title: Bioclimates of Italy

description: The Worldwide Bioclimatic Classification System according to Rivas-Martínez (WBCS) is a bioclimatic classification that is widely used in vegetation science, geobotany, and landscape ecology. To date, only one complete WBCS map has been produced for Italy at the national scale. Here, we define two major updates to the WBCS map of Italy: improvements to the surface spatial accuracy for the climate, especially for precipitation; and detailed mapping of the Submediterraneity Index and its levels, which mainly characterize the ecotone area between the Mediterranean and the Temperate macrobioclimates. Finally, all WBCS units (i.e. macrobioclimates, bioclimatic variants, bioclimates, continentality types, bioclimatic belts) and the Submediterraneity Index are mapped on a scale of 1:2,500,000. These maps and the bioclimatic indices and monthly climatic surfaces are available here as raster data-sets (resolution, 900 m) and are useful for accurate bioclimatic diagnosis for the entire Italian territory. They will also support vegetation–environment relationship analysis, ecological modeling, and applied studies of climate change at the national scale.
DOI: 10.6084/m9.figshare.5722882
title: Timelapse 2 - raw confocal files

description: See accompanying word documents<br><br>
DOI: 10.6084/m9.figshare.5722882.v1
title: Timelapse two - raw confocal files

description: See accompanying word documents<br><br>
DOI: 10.6084/m9.figshare.5722831
title: CodeDataCharSynchPatternsPBV.tar.gz

description: Code and data accompanying the manuscript: Characterizing synchrony patterns across cognitive task stages of associative recognition memory. By Oscar Portoles, Jelmer Borst, and Marieke van Vugt. European Journal of Neuroscience, 2018
DOI: 10.6084/m9.figshare.5722831.v1
title: CodeDataCharSynchPatternsPBV.tar.gz

description: Code and data accompanying the manuscript: Characterizing synchrony patterns across cognitive task stages of associative recognition memory. By Oscar Portoles, Jelmer Borst, and Marieke van Vugt. European Journal of Neuroscience, 2018