cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.x4f2nu
title: Occurrence Download

description: A dataset containing 41501 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2025-01-10",
 "EventDate is less than or equal to 2025-02-09",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 41501 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012667-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z2f26m
title: Occurrence Download

description: A dataset containing 731043 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is FishBase Database"
 ]
}

 The dataset includes 731043 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012637-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tndh5x
title: Occurrence Download

description: A dataset containing 474 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carya texana Buckley)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 474 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012671-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9h3aya
title: Occurrence Download

description: A dataset containing 2473 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Juglans californica S.Watson)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 2473 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012673-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cd7h22
title: Occurrence Download

description: A dataset containing 2033 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carya tomentosa (Lam.) Nutt.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 2033 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012672-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14206252
title: Supplement material to: Depaermentier, Kempf, Banffy, Alt (2024): Cultural diversity shaped Neolithic subsistence in the Carpathian Basin

description: This data is supplementary material, code, and figures to the paper:

Depaermentier, MLC; Kempf, M; Banffy, E; Alt, KW (2025): Cultural diversity shaped Neolithic subsistence in the Carpathian Basin, Scientific Reports 15, https://doi.org/10.1038/s41598-025-88541-z

 

You find here:

* Code to the analysis

* Intermediate results (plots of cropped catchment analysis of soil and the weighted conditional model)

* an exploded version of revised Figure 1 with single chronological site distributions

* and revised Figure 1 as high resolution .tif.
DOI: 10.5281/zenodo.14206253
title: Supplement material to: Depaermentier, Kempf, Banffy, Alt (2024): Cultural diversity shaped Neolithic subsistence in the Carpathian Basin

description: This data is supplementary material, code, and figures to the paper:

Depaermentier, MLC; Kempf, M; Banffy, E; Alt, KW (2025): Cultural diversity shaped Neolithic subsistence in the Carpathian Basin, Scientific Reports 15, https://doi.org/10.1038/s41598-025-88541-z

 

You find here:

* Code to the analysis

* Intermediate results (plots of cropped catchment analysis of soil and the weighted conditional model)

* an exploded version of revised Figure 1 with single chronological site distributions

* and revised Figure 1 as high resolution .tif.
DOI: 10.15468/dl.4cqhmj
title: Occurrence Download

description: A dataset containing 535 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Juglans hindsii (Jeps.) Jeps. ex R.E.Sm.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 535 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012674-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zz239b
title: Occurrence Download

description: A dataset containing 823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Juglans major (Torr.) A.Heller)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 823 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012675-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14788434
title: Understanding the Popularity of Packages in Maven Ecosystem

description: Maven Package Analysis




Overview


This repository contains scripts and notebooks for analyzing Maven packages. The analysis includes:



Distribution of Maven packages across different ranges of star counts.

Correlation matrix of popularity metrics for Maven packages.

Comparison of features across the top and bottom 20% of packages, along with P-value and Cohen’s d for effect size.

Hierarchical clustering to handle multi-collinearity among features, with selected metrics listed.

Logistic regression analysis to generate final results.




Prerequisites




Python 3.8 or higher

All required Python packages listed in requirements.txt




Installation




Clone the repository:



git clone <repository_url>
cd <repository_folder>

 



Install the required dependencies:



pip install -r requirements.txt

 






Usage




1. Distribution of Maven Packages by Star Count


To find the distribution of Maven packages across different ranges of star counts, run the following command:



python .\star_count_distribution.py




2. Correlation Matrix of Popularity Metrics


To generate the correlation matrix for Maven package popularity metrics, run the following command:



python .\cluster_corelation.py




3. Feature Comparison Across Top and Bottom 20%


To compare features across the top and bottom 20% of packages, including P-value and Cohen’s d for effect size, run the following command:



python .\minmaxmedian.py

 




4. Hierarchical Clustering for Feature Selection


To apply hierarchical clustering and handle multi-collinearity among features:



Open hierarchical_clustering.ipynb in a Jupyter Notebook environment.

Run all the cells in the notebook.


This step will identify the following metrics:



License

Commits Count

Readme Exists

About Info

Dependencies

Usages

Closed Issues Percentage

Release Frequency

Vulnerabilities


Figure 3 will also be generated during this process.



5. Logistic Regression Analysis


To perform logistic regression analysis and generate the final results, run the following command:



python .\Logistic_Regression.py


 

 



Contact


For any questions or issues, please reach out to the repository maintainer.
DOI: 10.5281/zenodo.14788435
title: Understanding the Popularity of Packages in Maven Ecosystem

description: Maven Package Analysis




Overview


This repository contains scripts and notebooks for analyzing Maven packages. The analysis includes:



Distribution of Maven packages across different ranges of star counts.

Correlation matrix of popularity metrics for Maven packages.

Comparison of features across the top and bottom 20% of packages, along with P-value and Cohen’s d for effect size.

Hierarchical clustering to handle multi-collinearity among features, with selected metrics listed.

Logistic regression analysis to generate final results.




Prerequisites




Python 3.8 or higher

All required Python packages listed in requirements.txt




Installation




Clone the repository:



git clone <repository_url>
cd <repository_folder>

 



Install the required dependencies:



pip install -r requirements.txt

 






Usage




1. Distribution of Maven Packages by Star Count


To find the distribution of Maven packages across different ranges of star counts, run the following command:



python .\star_count_distribution.py




2. Correlation Matrix of Popularity Metrics


To generate the correlation matrix for Maven package popularity metrics, run the following command:



python .\cluster_corelation.py




3. Feature Comparison Across Top and Bottom 20%


To compare features across the top and bottom 20% of packages, including P-value and Cohen’s d for effect size, run the following command:



python .\minmaxmedian.py

 




4. Hierarchical Clustering for Feature Selection


To apply hierarchical clustering and handle multi-collinearity among features:



Open hierarchical_clustering.ipynb in a Jupyter Notebook environment.

Run all the cells in the notebook.


This step will identify the following metrics:



License

Commits Count

Readme Exists

About Info

Dependencies

Usages

Closed Issues Percentage

Release Frequency

Vulnerabilities


Figure 3 will also be generated during this process.



5. Logistic Regression Analysis


To perform logistic regression analysis and generate the final results, run the following command:



python .\Logistic_Regression.py


 

 



Contact


For any questions or issues, please reach out to the repository maintainer.
DOI: 10.15468/dl.v6cpmg
title: Occurrence Download

description: A dataset containing 390 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Juglans microcarpa Berl.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 390 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012676-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v5mg5k
title: Occurrence Download

description: A dataset containing 1993 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Koeberlinia spinosa Zucc.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 1993 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012678-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n7tvh5
title: Occurrence Download

description: A dataset containing 264 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Vitex trifolia L.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 264 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012679-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dsrzsg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cryptocarya mannii Hillebr.)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012680-250127130748423/datasets/export for details.
DOI: 10.15468/dl.7yyw87
title: Occurrence Download

description: A dataset containing 11234575 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Chile"
 ]
}

 The dataset includes 11234575 records from 1955 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012641-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uh68b5
title: Occurrence Download

description: A dataset containing 682 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hosackia pinnata (Hook.) Abrams"
 ]
}

 The dataset includes 682 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0248973-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dfc8cx
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gynura albicaulis W.W.Sm."
 ]
}

 The dataset includes 19 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0234941-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.32nwa9
title: Occurrence Download

description: A dataset containing 1524 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hosackia gracilis Benth."
 ]
}

 The dataset includes 1524 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0248960-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t56uar
title: Occurrence Download

description: A dataset listing the 3819536 species recorded in GBIF matching the query:
{ }

 The dataset's 3819536 records were derived from 54146 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0202320-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bbgm5z
title: Occurrence Download

description: A dataset containing 329 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lacerta strigata Eichwald, 1831"
 ]
}

 The dataset includes 329 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007808-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fhrgf4
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aerangis fuscata (Rchb.f.) Schltr."
 ]
}

 The dataset includes 29 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017195-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.474zns
title: Occurrence Download

description: A dataset containing 5612 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lathyrus angulatus L.",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 5612 records from 246 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037330-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ts9vp5
title: Occurrence Download

description: A dataset containing 25152 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Abutilon Tourn. ex Mill.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 25152 records from 306 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007808-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qhdxyd
title: Occurrence Download

description: A dataset containing 1277552378 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset"
 ]
}

 The dataset includes 1277552378 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017198-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wghxuf
title: Occurrence Download

description: A dataset containing 257 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Keetia ripae (De Wild.) Bridson"
 ]
}

 The dataset includes 257 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037270-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pmricv
title: Occurrence Download

description: A dataset containing 555 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cestrum buxifolium Kunth"
 ]
}

 The dataset includes 555 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007808-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bpzmtq
title: Occurrence Download

description: A dataset containing 236 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is France",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Fritillaria meleagris L.",
 "Year 2020-2024"
 ]
}

 The dataset includes 236 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037339-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.shvf9b
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aerangis hariotiana (Kraenzl.) P.J.Cribb & Carlsward"
 ]
}

 The dataset includes 71 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017201-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y07drk
title: Occurrence Download

description: A dataset containing 29427 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Zosterops japonicus",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 29427 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007808-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.asdtw2
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aerangis mooreana (Rolfe ex Sander) P.J.Cribb & J.Stewart"
 ]
}

 The dataset includes 24 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017222-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yqvabm
title: Occurrence Download

description: A dataset containing 138 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ixia stricta (Eckl. ex Klatt) G.J.Lewis"
 ]
}

 The dataset includes 138 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037326-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2v6vmt
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kohautia socotrana Bremek."
 ]
}

 The dataset includes 15 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037374-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fzve8k
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crocus caricus (Kernd. & Pasche) Kernd., Pasche & Harpke"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009226-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3gsf9q
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kohautia microflora D.Mantell"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037344-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ktv5zn
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corybas umbonatus (Schltr.) Schltr."
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009225-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.