cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18396801
title: THE IMPORTANCE OF UZBEK FOLK FAIRY TALES IN RAISING A CHILD BASED ON NATIONAL CUSTOMS, VALUES, AND TRADITIONS

description: This article analyzes the role of Uzbek folk tales in child upbringing based on national customs and values. It emphasizes that folk tales serve as an important tool in shaping the moral and spiritual qualities of the younger generation, as illustrated through various examples. The findings of the study demonstrate that folk tales play a significant role in children's personal development and in fostering qualities such as honesty, diligence, respect for parents and elders, patriotism, and loyalty. They effectively contribute to strengthening national values and possess strong educational potential. The article concludes by highlighting the pedagogical importance of integrating folk tales into the upbringing process.
DOI: 10.5281/zenodo.18396802
title: THE IMPORTANCE OF UZBEK FOLK FAIRY TALES IN RAISING A CHILD BASED ON NATIONAL CUSTOMS, VALUES, AND TRADITIONS

description: This article analyzes the role of Uzbek folk tales in child upbringing based on national customs and values. It emphasizes that folk tales serve as an important tool in shaping the moral and spiritual qualities of the younger generation, as illustrated through various examples. The findings of the study demonstrate that folk tales play a significant role in children's personal development and in fostering qualities such as honesty, diligence, respect for parents and elders, patriotism, and loyalty. They effectively contribute to strengthening national values and possess strong educational potential. The article concludes by highlighting the pedagogical importance of integrating folk tales into the upbringing process.
DOI: 10.5061/dryad.0k6djhb0f
title: Non-additive genetic effects induce novel phenotypic distributions in male mating traits of F1 hybrids

description: Hybridization is a source of phenotypic novelty and variation because of
 increased additive genetic variation. Yet, the roles of non-additive
 allelic interactions in shaping phenotypic mean and variance of hybrids
 have been underappreciated. Here we examine the distributions of
 male-mating traits in F1 hybrids via a meta-analysis of 3,208 effect sizes
 from 39 animal species pairs. Although additivity sets phenotypic
 distributions of F1s to be intermediate, F1s also showed recessivity and
 resemblance to maternal species. F1s expressed novel phenotypes (beyond
 the range of both parents) in 65% of species pairs, often associated with
 increased phenotypic variability. Overall, however, F1s expressed smaller
 variation than parents in 51% of traits. While genetic divergence between
 parents did not impact phenotypic novelty, it increased phenotypic
 variability of F1s. By creating novel phenotypes with increased
 variability, non-additivity of heterozygotic genome may play key roles in
 determining mating success of F1s, and their subsequent extinction or
 speciation.
description: Dataset was collected through the systematic review. All data and
 analytic processes are clarified in the R
 code (<em>Supplementary_material_S1.Rmd</em>).
description: All data (<em>original.data.xlsx</em>) and R code
 (<em>Supplementary_material_S1.Rmd</em>) used in
 "Non-additive genetic effects induce novel phenotypic distributions
 in male mating traits of F1 hybrids" are uploaded on this repository.
 All materials of this study, including model outputs and Supplementary
 material S1 (html output of
 <em>Supplementary_material_S1.Rmd</em>), can be found on Github repository.  Original data file (<em>original.data.xlsx</em>) Contains sheets following: Sheet <em>Phenotype</em> contains all phenotypic data gathered through systematic review Sheet <em>Species.level.moderators</em> contains additional data (e.g., genetic distance between parents) used in meta-/Bayesian regression models Sheet <em>Description</em> provides explanations for column names of sheet <em>Phenotype</em> and <em>Species.level.moderators</em> Sheet <em>Primary.studies</em> provides a list of primary studies included in our meta-analysis
DOI: 10.5061/dryad.mgqnk98zd
title: Flow increases tolerance of heat and hypoxia of an aquatic insect

description: Recent experiments support the idea that upper thermal limits of aquatic
 insects arise, at least in part, from a lack of sufficient oxygen: rising
 temperatures typically stimulate metabolic demand for oxygen more than
 they increase rates of oxygen supply from the environment. Consequently,
 factors influencing oxygen supply, like water flow, should also affect
 thermal and hypoxia tolerance. We tested this hypothesis by measuring the
 effects of experimentally manipulated flows on the heat and hypoxia
 tolerance of aquatic nymphs of the giant salmonfly (Plecoptera:
 Pteronarcys californica), a common stonefly in western North America. As
 predicted, stoneflies in flowing water (10 cm s-1) tolerated water that
 was ~4 ºC warmer and that contained ~15% less oxygen than did those in
 standing water. Our results imply that the impacts of climate change on
 streamflow, such as changes in patterns of precipitation, and decreased
 snowpack, will magnify the threats to aquatic insects from warmer water
 temperatures and lower oxygen levels.
DOI: 10.5061/dryad.v9s4mw6v5
title: Selfing rate variation among natural populations of Mimulus ringens

description: Variation in selfing rates within and among populations of hermaphroditic
 flowering plants can strongly influence the evolution of reproductive
 strategies and the genetic structure of populations. This intraspecific
 variation in mating patterns may reflect both genetic and ecological
 factors, but the relative importance of these factors remains poorly
 understood. Here we explore how selfing in thirteen natural populations of
 the perennial wildflower Mimulus ringens is influenced by 1) pollinator
 visitation, an ecological factor, and 2) floral display, a trait with a
 genetic component that also responds to environmental variation. We also
 explore whether genetically based floral traits, including herkogamy,
 affect selfing.
             We found substantial variation among populations in selfing rate (0.13-0.55). Selfing increased strongly and significantly with floral display, among as well as within populations. Selfing also increased at sites with lower pollinator visitation and low plant density. However, selfing was not correlated with floral morphology. Overall, these results suggest that pollinator visitation and floral display, two factors that interact to affect geitonogamous pollinator movements, can influence the selfing rate. This study identifies mechanisms that may play a role in maintaining selfing rate variation among populations.
DOI: 10.5061/dryad.mgqnk98zf
title: Data from: Developmental influence on evolutionary rates and the origin of placental mammal tooth complexity

description: This package includes code and data used to build a 'parameter
 space' from outputs of a reaction-diffusion model of tooth
 morphogenesis called ToothMaker and then perform simulations of tooth
 complexity evolution within that parameter space. The datasets include the
 output of simulations conducted in ToothMaker (required to build
 the parameter spaces) as well as classification of tooth complexity and
 pattern data with the parameter space. In addition to the datasets
 relevant to ToothMaker, the package also includes tooth cusp pattern and
 cusp number data for a range of placental mammals species and their close
 relatives which is required to perform a phylogenetic reconstruction of
 placental tooth complexity. The included code performs a number of steps
 associated with the analysis including extracting tooth complexity
 measurements from ToothMaker outputs (R language), measuring enamel knot
 number (FIJI software), assembling the resultant parameter space (R
 language), simulating trait evolution within the parameter space (R
 language), comparing tooth complexity variation within the ToothMaker and
 placental datasets (R language), ancestral state reconstruction of
 placental tooth complexity and pattern data (R language), and exporting
 the results as tables and plots (R language).  
description: Refer to the README.txt within the compresed data package folder
 for usage notes.
DOI: 10.5061/dryad.wstqjq2kn
title: Echinoid Associated Traces (EAT)

description: Predation traces found on fossilized prey remains can be used to quantify
 the evolutionary history of biotic interactions. Fossil mollusk shells
 bearing these types of traces provided key evidence for the rise of
 predation during the Mesozoic Marine Revolution (MMR), an event which is
 thought to have reorganized global marine ecosystems. However, predation
 pressure on prey groups other than mollusks has not been explored
 adequately. Consequently, the ubiquity, tempo, and synchronicity of the
 MMR cannot be thoroughly assessed. Here, we expand the evolutionary record
 of biotic interactions by compiling and analyzing a new
 comprehensively-collected database on drilling predation in Meso-Cenozoic
 echinoids. Trends in drilling frequency reveal an Eocene rise in drilling
 predation that postdated echinoid infaunalization and the rise in
 mollusk-targeted drilling (an iconic MMR event) by ~100 million years. The
 temporal lag between echinoid infaunalization and the rise in drilling
 frequencies suggests that the Eocene upsurge in predation did not elicit a
 co-evolutionary or escalatory response. This is consistent with rarity of
 fossil samples that record high frequency of drilling predation and
 scarcity of fossil prey recording failed predation events. These results
 suggest that predation intensification associated with the MMR was
 asynchronous across marine invertebrate taxa and represented a long and
 complex process that consisted of multiple uncoordinated steps likely with
 variable co-evolutionary responses.
DOI: 10.5061/dryad.kh1893258
title: Data from: Mammal-bearing gastric pellets potentially attributable to Troodon formosus at the Cretaceous Egg Mountain locality, Two Medicine Formation, Montana, U.S.A.

description: Fossil gastric pellets (regurgitalites) have distinct taphonomic
 characteristics that facilitate inferences of behavioural ecology in deep
 time, despite their rarity in the fossil record. Using the taphonomic
 patterns of both extant and fossil small mammals from more recent geologic
 deposits as a guide, we assess the taphonomy of three unusual
 multi-individual aggregates of mammal skeletons from paleosols at Egg
 Mountain, a dinosaur nesting locality from the Upper Cretaceous Two
 Medicine Formation, Montana, USA. One aggregate consists of two
 individuals of the multituberculate Filikomys primaevus. This specimen is
 characterized by brecciated crania, articulated postcrania, and an absence
 of digestive markings, all suggestive of a non-predatory origin. Two
 additional aggregates consist of three and eleven individuals,
 respectively, primarily of the marsupialiform Alphadon halleyi. High
 proportions of crania and indigestible elements (e.g. teeth), extensive
 disarticulation and breakage, digestive corrosion patterns, and the
 absence of a phosphatic ground mass are indicative of regurgitalites and
 align with features of extant prey in diurnal raptor gastric pellets. We
 interpret these specimens as the oldest known mammal-bearing
 regurgitalites. The discrepancy in taphonomic features implies behavioural
 separation between the two mammalian taxa at the locality. Abundant shed
 teeth and nesting evidence at the locality favors Troodon formosus as the
 predator responsible for the regurgitalites, congruent with previous
 inferences of a small-bodied prey diet, manipulation of prey during
 feeding, heightened metabolic processes, and potential nocturnality for
 this taxon.
description: <strong>Supplemental data tables</strong><br>
 An Excel file ("1_Tables_S1_S2_S3.xlsx") contains datasets for
 skeletal element relative abundance (table s1, sheet 1), chi-squared
 analyses (table s2, sheet 2), and regression calculations (table s3, sheet
 3). <strong>R code</strong><br> There
 are two text files with R code used in the regression calculation for
 Figure 7: "2_File_S1_mass_ingestion_capacity_R.txt" and
 "3_File_S2_mass_pellet_vol_R.txt"
 <strong>Supporting Information</strong><br> Two
 files (identical .docx and .pdf versions for user preference)
 contain supplementary figure s1, supplementary table s4, and supplementary
 discussion and
 references: "Supp_Info_Fig_S1_Table_S4_Supp_Disscussion.docx"
 and "Supp_Info_Fig_S1_Table_S4_Supp_Disscussion.pdf"
DOI: 10.5061/dryad.612jm6435
title: Memory-two zero-determinant strategies in repeated games

description: Repeated games have provided an explanation how mutual cooperation can be
 achieved even if defection is more favorable in a one-shot game in
 prisoner's dilemma situation. Recently found zero-determinant
 strategies have substantially been investigated in evolutionary game
 theory. The original memory-one zero-determinant strategies unilaterally
 enforce linear relations between average payoffs of players. Here, we
 extend the concept of zero-determinant strategies to memory-two strategies
 in repeated games. Memory-two zero-determinant strategies unilaterally
 enforce linear relations between correlation functions of payoffs and
 payoffs at the previous round. Examples of memory-two zero-determinant
 strategy in the repeated prisoner's dilemma game are provided, some
 of which generalize the Tit-for-Tat strategy to memory-two case. Extension
 of zero-determinant strategies to memory-$n$ case with $n\geq 2$ is also
 straightforward.
DOI: 10.5061/dryad.9cnp5hqhf
title: Multiple diversity facets of crucial microbial groups in biological soil crusts promote soil multifunctionality

description: Aim: Microbial diversity is one of the most important factors for
 maintaining the performance of multiple functions in soils
 (multifunctionality). However, existing studies typically consider
 taxonomic richness or Shannon diversity of the entire community. We know
 little about the connection network of taxonomic and phylogenetic
 diversity facets and their collective impact on multifunctionality. In
 this study, the linkages of diversity effects within functional groups
 were disentangled in drylands. Location: The central Tibetan Plateau. Time
 period: Present. Major taxa studied: Phototrophs and diazotrophs (mainly
 cyanobacteria). Methods: Given the carbon- and nitrogen-limited nature of
 drylands, we conducted a high throughput sequencing of C/N-fixing
 functional groups from biocrusts and evaluated multiple diversity facets
 (i.e., richness, evenness, and phylogeny-related trait dissimilarity),
 together with seven crucial variables of soil functioning to calculate
 multifunctionality. The relations between multifaceted diversity and
 abundance with individual functions and multifunctionality were validated
 by a set of solid statistical analyses. Results: We found that the
 integrated biodiversity index was a stronger predictor of
 multifunctionality than richness. The divergent performance of different
 diversity facets determined the idiosyncratic effect of each functional
 group on soil multifunctionality. Moreover, the evaluation of functional
 significance at the species level gave important clues on the trade-offs
 and redundancy in each functional group, explaining the distinct patterns
 of diversity effects. Namely, richness was the dominant factor for
 diazotrophs to maximize multifunctionality, whereas phylogenetic
 dissimilarity was the essential one for phototrophs. Main conclusions: our
 study demonstrated that multiple diversity facets should be considered
 when grasping the biodiversity effects. In contrast with the community
 level, within-functional group measures may adequately capture the
 features of diversity that are most correlated with soil
 multifunctionality. Our results provided a perspective to bridge the gap
 between taxonomic and trait-based approaches for elucidating the
 biodiversity-ecosystem function relationship.
DOI: 10.5061/dryad.7m0cfxpt2
title: Dataset from: Changes in cell size and shape during 50,000 generations of experimental evolution with Escherichia coli

description: Bacteria adopt a wide variety of sizes and shapes, with many species
 exhibiting stereotypical morphologies. How morphology changes, and over
 what timescales, is less clear. Previous work examining cell morphology in
 an experiment with Escherichia coli showed that
 populations evolved larger cells and, in some cases, cells that were less
 rod-like. That experiment has now run for over two more decades.
 Meanwhile, genome sequence data are available for these populations, and
 new computational methods enable high-throughput microscopic analyses. In
 this study, we measured stationary-phase cell volumes for the ancestor and
 12 populations at 2,000, 10,000, and 50,000 generations, including
 measurements during exponential growth at the last time point. We measured
 the distribution of cell volumes for each sample using a Coulter counter
 and microscopy, the latter of which also provided data on cell shape. Our
 data confirm the trend toward larger cells while also revealing
 substantial variation in size and shape across replicate populations. Most
 populations first evolved wider cells but later reverted to the
 ancestral length-to-width ratio. All but one population evolved mutations
 in rod shape maintenance genes. We also observed many ghost-like cells in
 the only population that evolved the novel ability to grow on citrate,
 supporting the hypothesis that this lineage struggles with maintaining
 balanced growth. Lastly, we show that cell size and fitness
 remain correlated across 50,000 generations. Our results suggest that
 larger cells are beneficial in the experimental environment, while the
 reversion toward ancestral length-to-width ratios suggests partial
 compensation for the less favorable surface area-to-volume ratios of the
 evolved cells.
description: Data was collected using a variety of methods. Cell size data
 were collected using a coulter counter and microscopy. Cell death data
 were collected using micrscopy and two-color live dead stain. Fitness and
 mutation data for the the LTEE lines were downloaded from publicly
 available datasets. Micrographs, including those collected cell size and
 cell death, were first processed using SuperSegger. Numerical output from
 SuperSegger analyses were imported into R, as were all other data
 collected for this work, and analyzed therein. More detail will be
 provided in the future.
DOI: 10.5061/dryad.931zcrjjt
title: How much can we differentiate at a brief glance: Revealing the truer limit in conscious contents through the Massive Report Paradigm (MRP)

description: Upon a brief glance, how well can we differentiate what we see from what
 we do not? Previous studies answered this question as “poorly”. This is in
 stark contrast with our everyday experience. Here, we consider the
 possibility that previous restriction in stimulus variability and response
 alternatives reduced what participants could express from what they
 consciously experienced. We introduce a novel Massive Report paradigm that
 probes the ability to differentiate what we see from what we do not. In
 each trial, participants viewed a natural scene image and judged whether a
 small image patch was a part of the original image. To examine the limit
 of discriminability, we also included subtler changes in the image as
 modification of objects. Neither the images nor patches were repeated per
 participant. Our results showed that participants were highly accurate
 (accuracy &gt; 80%) in differentiating patches from the viewed images
 from patches that are not present. Additionally, the differentiation
 between original and modified objects was influenced by object sizes
 and/or the congruence between objects and the scene gists. Our Massive
 Report paradigm opens a door to quantitatively measure the limit of
 immense informativeness of a moment of consciousness.
description: Please refer to the README file for how to use this dataset.
DOI: 10.5061/dryad.qjq2bvqft
title: Trans-generational viral transmission and immune priming are dose-dependent

description: It is becoming increasingly apparent that trans-generational immune
 priming (i.e. the transfer of the parental immunological experience to its
 progeny resulting in offspring protection from pathogens that persist
 across generations) is a common phenomenon not only in vertebrates, but
 also invertebrates. Likewise, it is known that covert pathogenic
 infections may become ‘triggered’ into an overt infection by various
 stimuli, including exposure to heterologous infections. Yet rarely have
 both phenomena been explored in parallel. Using as a model system the
 African armyworm (Spodoptera exempta), an eruptive agricultural pest, and
 its endemic dsDNA virus (Spodoptera exempta nucleopolyhedrovirus,
 SpexNPV), the aim of this study was to explore the impact of parental
 inoculating-dose on trans-generational pathogen transmission and immune
 priming (in its broadest sense). Larvae were orally-challenged with one of
 five doses of SpexNPV and survivors from these treatments were mated and
 their offspring monitored for viral mortality. Offspring from parents
 challenged with low viral doses showed evidence of ‘immune priming’ (i.e.
 enhanced survival following SpexNPV challenge); in contrast, offspring
 from parents challenged with higher viral doses exhibited greater
 susceptibility to viral challenge. Most offspring larvae died of the virus
 they were orally-challenged with; in contrast, most offspring from parents
 that had been challenged with the highest doses were killed by the
 vertically-transmitted virus (90%) and not the challenge virus. These
 results demonstrate that the outcome of a potentially lethal virus
 challenge is critically dependent on the level of exposure to virus in the
 parental generation - either increasing resistance at very low parental
 viral doses (consistent with trans-generational immune-priming) or
 increasing susceptibility at higher parental doses (consistent with virus
 triggering). We discuss the implications of these findings for
 understanding both natural epizootics of baculoviruses and for using them
 as biological control agents.
description: Data were collected in the laboratory using biological materials
 collected in the field in Tanzania. Techniques include
 virus bioassays and molecular methods (qPCR and RFLP).
 Data were analysed using the R stats package version 3.5.1
 (2018-203 07-02) (R Core Team (2018).
description: See the readme.txt file