cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28028411.v3
title: Detailed documents on genome assembly and gene structures for <i>Bathymodiolus marisindicus </i>and its endosymbiont

description: detailed documents on genome assembly and gene structures for<i> Bathymodiolus marisindicus </i>and and its endosymbiont
DOI: 10.6084/m9.figshare.833879.v1
title: Tau trace of LU class C with 128 processors on Graphene

description: This is a Tau trace of the NASPB LU Benchmark obtained by Georges Markomanolis on the Graphene cluster. The trace was too large to be updated and was thus splitted.
DOI: 10.17632/8phzww6jbw
title: North Pacific Tritium (1952-2024)

description: To comprehensively investigate the spatiotemporal distribution characteristics of tritium in the North Pacific Ocean, we compiled an extensive dataset comprising approximately 708,000 seawater tritium measurements from multiple authoritative sources. These include the Global Ocean Data Analysis Project (GLODAP, 2019), Data Publisher for Earth & Environmental Science (PANGAEA) (OMS, 2018), Clivar and Carbon Hydrographic Data Office (CCHDO, 2024), IAEA MARIS (IAEA, 2024), Ocean Data View (Jenkins et al., 2019), and the Overarching Radiation-monitoring Data Browsing System in the Coastal Ocean of Japan (ORBS) (TEPCO, 2024a). Furthermore, we supplemented this dataset with approximately 8,600 tritium measurements extracted from 11 peer-reviewed publications (Kaizer et al., 2020; Kim et al., 1997; Watanabe et al., 1991; Ohtsuki et al., 2023; Shozugawa et al., 2016; Povinec et al., 2017; Blaauea, 1977; Jenkins et al., 2023; Ueda et al., 2005; Landa et al., 1999; Kondo et al., 2004).

The data processing and quality control procedures were implemented through a systematic three-stage approach. Initially, we screened and selected valid tritium measurements based on non-negative activity concentrations within the geographical boundaries of the North Pacific Ocean. Subsequently, we standardized the dataset with respect to temporal and spatial parameters, including sampling time, latitude, longitude, depth, and tritium concentration. Specifically, seawater pressure measurements were converted to depth values, and all tritium concentration units were standardized to Bq/m³. Finally, we applied rigorous screening criteria based on five key parameters: sampling time, geographical coordinates (longitude and latitude), station location, and tritium concentration. Measurements were considered duplicates and subsequently removed if all these parameters were identical.

Following this comprehensive data processing protocol, we obtained a refined dataset containing 24,118 validated tritium measurements spanning from 1952 to 2024. It is important to note that all tritium concentrations in this dataset represent the measured activity at the time of sampling, without any decay correction applied. This approach ensures the preservation of original measurement integrity while providing a robust foundation for spatiotemporal analysis of tritium distribution patterns in the North Pacific Ocean.
DOI: 10.6084/m9.figshare.22557733.v1
title: Test Bundles for DIPY

description: Two uncinate left bundles for the BundleWarp[1] tutorial in DIPY[2]. <br> [1] Chandio, B. Q., Olivetti, E., Romero, D., Harezlak, J., & Garyfallidis, E. (2023). BundleWarp, streamline-based nonlinear registration of white matter tracts. <em>bioRxiv</em>, 2023-01. <br> [2] Garyfallidis, E., Brett, M., Amirbekian, B., Rokem, A., Van Der Walt, S., Descoteaux, M., ... & Dipy Contributors. (2014). Dipy, a library for the analysis of diffusion MRI data. <em>Frontiers in neuroinformatics</em>, <em>8</em>, 8.
DOI: 10.6084/m9.figshare.1289930.v1
title: Vegetação, unidades fitoecológicas e diversidade paisagística do estado do Ceará

description: Os arquivos aqui disponíveis são suplementos digitais ao artigo "Vegetação, unidades fitoecológicas e diversidade paisagística do estado do Ceará", publicado na revista Rodriguésia, volume 66(3) 1- O primeiro arquivo é o mapa geomorfológico do estado do Ceará apresentado no artigo. 2- O segundo é o mapa de unidades fitoecológicas do Ceará apresentado e discutido em nosso artigo, o qual é uma modificação da proposta cartográfica feita por Figueiredo (1997. Atlas do Ceará. Fortaleza: IPLANCE). 3- Os arquivos 3.1, 3.2 e 3.3 são arquivos para visualizar o mapa fitogeográfico do artigo em sistemas de informações geográficas. O arquivo 3.1 é o mapa apresentado em nosso artigo em formato KML, para baixar e visualizar no Google Earth. O arquivo 3.2. é o mesmo mapa em formato Shapefile para que o leitor possa fazer seus próprios mapas à partir do mapa apresentado no artigo. O arquivo 3.3 é o mapa de unidades fitoecológicas do Ceará como originalmente proposto pelo IPECE no Atlas do Ceará, em formato KML para visualizar no Google Earth. 4- O quarto arquivo é um organograma representando a relação entre as diferentes unidades geomorfológicas e os tipos vegetacionais do estado. 5- O quinto arquivo traz uma listagem de espécies características de cada tipo vegetacional tratado no artigo. Esta lista não é extensiva e apenas mostra um pequeno grupo de espécies típicas das vegetações cearenses. 6 e 7- Por fim, nosso artigo analiza por meio de análises multivariadas a similaridade florística entre as vegetações do estado, segundo dados disponíveis na literatura. A matriz de presença-ausência utilizada nas análises multivariadas e as referências bibliográficas dos trabalhos estão respectivamente no sexto e sétimo arquivos. Também disponibilizamos como suplemento digital ao artigo um acervo fotográfico dos diferentes tipos vegetacionais e paisagens do estado do Ceará. O acervo fotográfico pode ser acessado em: http://dx.doi.org/10.6084/m9.figshare.1289920. M.M. Moura-Fé foi responsável pela alaboração do arquivo 1; M.F. Moro foi responsável pela alaboração dos arquivos 2 e 3; M.B. Macêdo foi responsável pelo arquivo 4; A.S.F. Castro foi responsável pelo arquivo 5 e R.C. Costa foi responsável pelos arquivos 6 e 7.
DOI: 10.6084/m9.figshare.19613889.v1
title: Atmosfera USM Muka Head Dataset

description: The data comprise the eddy covariance and biometeorology parameters collected at the Muka Head Station, Centre for Marine and Coastal Studies (CEMACS), USM, Penang, Malaysia.
DOI: 10.6084/m9.figshare.22688458.v1
title: GWAS summary data of hypothalamus in IMAGEN

description: GWAS summary data of hypothalamus in IMAGEN
DOI: 10.6084/m9.figshare.26409292.v1
title: cell annotations wrt glomeruli

description: Used as input to the analyses in the manuscript "Single cell spatial transcriptomic profiling of childhood-onset lupus nephritis reveals complex interactions between kidney stroma and infiltrating immune cells", hosted at https://github.com/Nanostring-Biostats/childhood-onset-lupus-nephritis-analyses
DOI: 10.6084/m9.figshare.5127049.v1
title: Supplementary Material for: Body Mass Index and Mortality in Kidney Transplant Recipients: A Systematic Review and Meta-Analysis

description: <b><i>Background:</i></b> A higher body mass index (BMI) seems to be linked to survival advantage in maintenance hemodialysis patients. However, it is uncertain if this ‘obesity survival paradox' is also observed in kidney transplant recipients. Hence, we systematically reviewed the literature on the impact of pre-transplantation BMI on all-cause mortality in this population. <b><i>Methods:</i></b> We searched MEDLINE, EMBASE, Web of Science, CINAHL, and Cochrane CENTRAL for relevant studies up to July 2013. Two investigators independently selected the studies using predefined criteria, abstracted the data from the included studies, and independently assessed each study's quality using the Newcastle-Ottawa Quality Assessment Scale. In addition to the qualitative synthesis, we quantitatively pooled the results of the studies with clinical, methodological, and statistical homogeneity. <b><i>Results:</i></b> We screened 7,123 records, from which we included 11 studies (with a total of 305,392 participants) in this systematic review and 4 studies in the meta-analyses. In the only study that included children, obesity was linked to higher mortality in children of 6-12 years old. For adults, our meta-analyses indicated that compared to normal BMI, underweight [Hazard Ratio (HR): 1.09; 95% Confidence Interval (CI): 1.02-1.20], overweight (HR: 1.07; 95% CI: 1.04-1.12), and obese (HR: 1.20; 95% CI: 1.14-1.23) levels of BMI were associated with higher mortality. <b><i>Conclusion:</i></b> The presence of the obesity survival paradox is unlikely in kidney transplant recipients since both extremes of pre-transplantation BMI are linked to higher mortality in this population.
DOI: 10.6084/m9.figshare.24564829.v2
title: REFSQ_2024_Tertiary_Study_AI4RE.xlsx

description: Conducting a tertiary study to explore the current state-of-the-art in the implementation and adoption of AI technologies to assist RE activities.
DOI: 10.6084/m9.figshare.7019822.v1
title: Fugere_selection_database.xlsx

description: Dataset for Fugère & Hendry (2018) Human influences on the strength of phenotypic selection. PNAS.<br>Please see comments in .xlsx file for a description of column content, and sheet 'system information/notes' for an explanation of how coefficients were split into 'natural' vs. 'disturbed' conditions. For any questions about the data, or if you find errors, please contact vincent.fugere@mail.mcgill.ca<br>
DOI: 10.17632/rwy35zmygp
title: The Accuracy of pH Strip Testing and pH Liquid Testing versus Standard pH Meter of Gastric Contents in Critically Ill patients

description: This dataset is the results from the tests for gastric content pH using pH strips (pHS) and pH liquid (pHL) tests that were compared to standard pH meter (pHM) measurements in critically ill gastric contents."
DOI: 10.6084/m9.figshare.14273594.v2
title: data_and_code.zip

description: Data and code for paper - Classifying User Requirements from Online Feedback in Small Dataset Environments using Deep Learning
DOI: 10.6084/m9.figshare.22193386.v1
title: Data and codes for fish functional and phylogenetic rarity.

description: Data and codes for fish functional and phylogenetic rarity.
DOI: 10.6084/m9.figshare.24494980.v1
title: Commit-level vulnerability detection - datasets and models

description: Supplementary material, including datasets and models, for the thesis "Evaluating and improving code-change representations for commit-level vulnerability detection".
DOI: 10.6084/m9.figshare.29119511.v1
title: Leaf area, dry mass and specific leaf area of Soldanella carpatica, Homogyne alpina and Vaccinium myrtillus leaves collected in Tatra Mountains at different elevations

description: Leaf area, dry mass and specific area of leaves of Vaccinium myrtillus, Soldanella carpatica (overwintered leaves), and Homogyne alpina (new leaves) collected in the understorey (Jaworzynka Valley, 1080 m asl, 1125 m asl), clearing (Jaworzynka Valley, 1080 m asl, 1125 m asl), subalpine (Hala Gasienicowa, 1615 m asl), and peak alpine (Liliowe Pass 1970 m asl) site in Tatra Mountains, Poland.
DOI: 10.6084/m9.figshare.5120443.v1
title: Supplementary Material for: Multipotential Neural Precursors Transplanted into the Metachromatic Leukodystrophy Brain Fail to Generate Oligodendrocytes but Contribute to Limit Brain Dysfunction

description: Neural stem cells appear to be best suited for regenerative therapy in neurological diseases. However, the effects of high levels of potentially toxic substances such as sulfatides – which accumulate in metachromatic leukodystrophy (MLD) – on this regenerative ability are still largely unclear. To start addressing this question, in vitro and in vivo experiments were used to examine the behavior of multipotential neural precursors exposed to abnormally high levels of sulfatides. Following transplantation of dissociated neurospheres into the brain of presymptomatic MLD pups, the majority of donor-derived cells were distributed in a caudal to rostral direction, with higher numbers in the cortex. Most if not all of the donor cells acquired an astroglial phenotype. We found no evidence of oligodendrocyte or neuronal commitment of transplanted cells in long-term-treated MLD mice (e.g. up to 1.5 years of age). This was in line with our in vitro findings of sulfatides blocking oligodendrocyte formation after induction of differentiation in sulfatide-treated epidermal growth factor/fibroblast growth factor responsive neurospheres. Transplanted MLD mice showed an improved arylsulfatase A (ARSA) activity and a significant amelioration of sulfatide metabolism, neurodegeneration and motor-learning/memory deficits. Furthermore, transplanted cells were shown to act as a source of ARSA enzyme that accumulated in endogenous brain cells, indicating the occurrence of enzyme cross-correction between transplanted and host cells. These results provide a first insight into the effect of sulfatides on the stemness properties of neural stem cells and on the effects of the MLD environment on the in vivo expectations of using neural stem cells in cell therapy.
DOI: 10.6084/m9.figshare.5135629.v1
title: Vibrio in shellfish in North Carolina

description: Data was generated by collecting oysters from the environment and culturing pathogenic bacteria with molecular confirmation. Methodology included in references.
DOI: 10.17632/6f6h874d6w
title:  Núm. 23 (2021): Desafíos del neoliberalismo en un contexto pospandemia

description: A propósito de conmemorarse dos años del levantamiento popular de octubre de 2019 en Ecuador, la Revista Textos y Contextos dedica esta edición al tema “Desafíos del neoliberalismo en un contexto pospandemia”. Los artículos invitan a la discusión sobre qué significa el avance del neoliberalismo para nuestras vidas, especialmente en un escenario pos-pandemia, o cuando se han dado al menos unos pasos hacia su superación. Que podamos plantear las preguntas correctas, develar las contradicciones apremiantes y las amenazas latentes parece una labor imprescindible en los tiempos que corren, pues solo así estaremos en condiciones de politizar nuestros anhelos democráticos.
DOI: 10.6084/m9.figshare.11923611.v3
title: BlogCatalog dataset

description: <b>Abstract</b>: BlogCatalog is the social blog directory which manages the bloggers and their blogs.<br><b>Number of Nodes:</b>10,312<b>Number of Edges:</b>333,983<b>Missing Values?</b>no<br><b>Source:</b>Nitin Agarwal+, Xufei Wang*, Huan Liu*<br><br>+ Department of Information Science, University of Arkansas at Little Rock. E-mail:nxagarwal@ualr.edu<br><br>* School of Computing, Informatics and Decision Systems Engineering, Arizona State University. E-mail: huan.liu@asu.edu, xufei.wang@asu.edu<br><b>Data Set Information:</b>2 files are included:<br><br>1. nodes.csv<br>-- it's the file of all the users. This file works as a dictionary of all the users in this data set. It's useful for fast reference. It contains all the node ids used in the dataset.<br><br>2. edges.csv<br>-- this is the friendship network among the bloggers. The blogger's friends are represented using edges. Here is an example.<br><br>1,2<br><br>This means blogger with id "1" is friend with blogger id "2".<br><b>Attribute Information:</b>This is the data set crawled on July, 2009 from BlogCatalog ( http://www.blogcatalog.com ). BlogCatalog is a social blog directory website. This contains the friendship network crawled. For easier understanding, all the contents are organized in CSV file format.<br><br>-. Basic statistics<br><br>Number of bloggers : 88,784<br><br>Number of friendship pairs: 4,186,390<br><b>Relevant Papers:</b><b><br></b>Nitin Agarwal and Huan Liu. ”Modeling and Data Mining in Blogosphere”, Synthesis Lectures on Data Mining and Knowledge Discovery #1, Morgan & Claypool Publishers, Robert Grossman (Editor), August 2009. ISBN: 9781598299083 (paperback) ISBN: 9781598299090 (ebook) Nitin Agarwal, Magdiel Galan, Huan Liu, and Shankar Subramanya. WisColl: Collective Wisdom based Blog Clustering. Journal of Information Science, 180(1): 39-61, January, 2010. Nitin Agarwal, Huan Liu, Sudheendra Murthy, Arunabha Sen, and Xufei Wang. A Social Identity Approach to Identify Familiar Strangers in a Social Network. In Proceedings of the Third International AAAI Conference on Weblogs and Social Media (ICWSM09), pp. 2 - 9, May 17-20, 2009. San Jose, California. Nitin Agarwal, Huan Liu, Sudheendra Murthy, Arunabha Sen, and Xufei Wang. "A Social Identity Approach to Identify Familiar Strangers in a Social Network", 3rd International AAAI Conference on Weblogs and Social Media (ICWSM09), pp. 2 - 9, May 17-20, 2009. San Jose, California.<br>
DOI: 10.6084/m9.figshare.29144441.v1
title: Table 4. Prediction of MV and MW Properties Using Three Regression Models and Advanced Machine Learning Techniques..docx

description: Table 4.
DOI: 10.6084/m9.figshare.28481231.v1
title: 3D structures of sediment aggregates at different states of microbial colonization

description: These are 3D scans of aggregate structures when the sediment particles are resembled by microbial colonization. File name with a "b" indicates microbial substances, while "s" represents sediment particles.
DOI: 10.6084/m9.figshare.12611162.v1
title: Patterns of Expenditure_Quant Data

description: The data presents the variables utilised to assess catastrophic health expenditure among selected slum and non-slum dwellers in a metropolis of Southwestern Nigeria
DOI: 10.6084/m9.figshare.12818630.v1
title: Employee happiness, quality of work life, and organizational commitment

description: These datasets include main and additional findings from my research. Data are in the form of tables, charts, and graphs.
DOI: 10.6084/m9.figshare.1420575.v1
title: Post-fire recovery in the Cape Floristic Region of South Africa

description: This document describes the data associated with the manuscript <em>Climatic controls on ecosystem resilience: post-fire regeneration in the Cape Floristic Region of South Africa</em>.
DOI: 10.6084/m9.figshare.28881146.v1
title: text-summarization-using-nlp-beginner.ipynb

description: Data supporting Figures 2, 3 and Tables 1, 2 in the manuscript titled <b>Artificial Intelligence Driven Clustering Approach for Extractive Text Summarization Using Hybrid Neuro Fuzzy Controller and Fire Hawk Optimization</b>
DOI: 10.6084/m9.figshare.7686242.v1
title: Additional file 4: of Salt stress vs. salt shock - the case of sugar beet and its halophytic ancestor

description: Changes in expression levels of DEGs responding to salt stress or shock and assigned to ‘COMMON’ category. ‘COMMON’ – genes that were differentially expressed both in sea- and sugar beet. MC - sea beet (B. maritima), control; M150 - sea beet (B. maritima), 150 mM NaCl; M300 - sea beet (B. maritima), 300 mM NaCl; HC - sugar beet (B. vulgaris cv. ‘Huzar’), control; H150 - sugar beet (B. vulgaris cv. ‘Huzar’), 150 mM NaCl; H300 - sugar beet (B. vulgaris cv. ‘Huzar’), 300 mM NaCl. (XLS 302 kb)
DOI: 10.17632/jsxgxgnnxb
title: Waste Heat Recovery

description: This MATLAB code package implements the core methodology described in the paper titled "Parameter analysis of waste heat recovery system of latent heat utilization compound organic Rankine cycle",The code demonstrates the complete workflow from raw data preprocessing to final result generation,the code enables full reproducibility of Figures 3-14.
DOI: 10.6084/m9.figshare.24420706.v1
title: <b>Telomere-to-telomere genome of the allotetraploid legume</b><b> </b><b><i>Sesbania cannabina</i></b><b><i> </i></b><b>reveals transposon-driven subgenome divergence and mechanisms of alkaline stress tolerance</b>

description: <b>Telomere-to-telomere genome of the allotetraploid legume</b><b> </b><b><i>Sesbania cannabina</i></b><b><i> </i></b><b>reveals transposon-driven subgenome divergence and mechanisms of alkaline stress tolerance</b>
DOI: 10.6084/m9.figshare.9896366.v2
title: WordNet Knowledge Graph

description: Knowledge graph generated from natural language definitions extracted from WordNet.
DOI: 10.17632/pw53zrmrg8
title: Data for: Investigating the Relationship between RPN Parameters in Fuzzy PFMEA and OEE in a Sugar Factory

description: The results of the research showed a negative correlation between OEE and RPN
DOI: 10.17632/v24w25b5r4
title: Data for: In-situ LA-ICPMS U-Pb dating and geochemical characterization of fault-zone calcites in the central Tarim Basin, northwest China: implications for fluid circulation and fault reactivation
DOI: 10.6084/m9.figshare.1512427.v7
title: brain tumor dataset

description: This brain tumor dataset contains 3064 T1-weighted contrast-inhanced images with three kinds of brain tumor. Detailed information of the dataset can be found in the readme file.The README file is updated:Add image acquisition protocolAdd MATLAB code to convert .mat file to jpg images
DOI: 10.6084/m9.figshare.20801860.v1
title: Supplementary data.docx

description: Supplementary data for article <strong>MICRORNA EXPRESSION ANALYSIS IN BLOOD OF TRIATHLONIST ATHLETES REVEALS A PANEL OF PERSPECTIVE BIOMARKERS OF OVERTRAINING SYNDROME WITH MIR-182-3P AS A HIGHLIGHT.</strong>
DOI: 10.6084/m9.figshare.24988665.v1
title: <b><i>The Relationship between Internet Addiction and Lifestyle among High School Students: a cross sectional in the west of Iran</i></b>

description: Excessive internet usage can precipitate internet addiction, negatively impacting lifestyle behaviors, especially during adolescence. These warrants investigating associations between internet addiction and lifestyle factors. To examine the relationship between internet addiction and health-promoting lifestyle dimensions among Iranian high school students. A cross-sectional study was conducted among 407 students from Sanandaj, Iran selected via cluster sampling. Internet addiction was assessed using the Young Internet Addiction Test. Lifestyle was measured via the Health-Promoting Lifestyle Profile questionnaire. Regression analyses evaluated associations while adjusting for covariates. Approximately 25% of participants were at risk of internet addiction. Prevalence variations across groups lacked significance. Non-addicted students had significantly higher overall healthy lifestyle scores (p&lt;0.05). Spiritual growth, health responsibility and nutrition scores significantly differed between addicted and non-addicted students. Regression analyses revealed a statistically significant negative correlation between internet addiction and lifestyle even after adjustment (p&lt;0.001). Nutrition and physical activity scores particularly declined for those at risk of addiction. Internet addiction was significantly associated with unhealthy dietary habits, sedentary behavior, and a lower healthy lifestyle. It may also hinder stress management and spiritual well-being. With rising internet integration, collaborative awareness programs between educational institutions, families, and communities are warranted to curb addiction risks and promote healthy lifestyles in youth. This study provides valuable insights, though longitudinal research is needed to establish causality.
DOI: 10.6084/m9.figshare.25103255.v5
title: data and MATAB scripts

description: The data and MATLAB scripts used in the research paper on the transferability of Geogenic Contaminated Groundwaters model.dataHydroAs: hydrochemical parameter data for arsenic modelingdataHydroF: Hydrochemical parameter data for fluorine modelingdataSurfaceAs: Surface parameter data for arsenic modelingdataSurfaceF: Surface parameter data for fluorine modeling<br>SiteDT: Datong BasinHT: Hetao BasinTY: Taiyuan BasinYC: Yuncheng BasinLF: Linfen BasinCZ: Changzhi BasinXZ: Xinzhou BasinMD: Mekong DeltaRD: Red River Delta