cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30145906
title: Supplementary Material for: Changes in Tissue-Specific Innate Lymphoid Cell Populations during Rat Development

description: Introduction: Innate lymphoid cells (ILCs) play a crucial role in immunity by regulating innate and adaptive immune cells and are involved in various physiological processes such as morphogenesis, homeostasis, metabolism, and tissue repair. ILCs are categorized into three primary subgroups: ILC1s, ILC2s, and ILC3s, which are distinguished by their functions and their production of cytokines resembling those of T helper cell subsets. The distribution of ILCs during development, particularly in rats, is not well understood. This study aims to investigate the changes in tissue-specific ILC populations throughout rat development, from embryonic days to postnatal day (PN) 30.
Methods: ILC subsets in different organs, such as the liver, lung, spleen, mesenteric lymph nodes (mLN), thymus, small intestine, and colon, were examined through surface and intracellular staining using flow cytometry (FACS Aria III).
Results: In the liver, ILC3s were most common before birth, followed by an increase in ILC1s one week after birth, and a rise in ILC2s by the end of the first month after birth. The lung showed an increase in ILC1s and NK progenitor cells after birth, with a decrease in ILC3s by the end of the first month postnatally. The spleen changed from being dominated by ILC3s in the fetal period to being dominated by ILC2s at PN30. In the mLN, ILC2s were the most common subtype throughout development. ILC3s were the main subtype in the thymus, with a decrease in NK cell representation after birth. The small intestine and colon were dominated by ILC2s, with an increase in ILC1s observed in the colon after birth.
Conclusions: This study provides insights into the changes in ILC populations during prenatal and postnatal development in rat hematopoietic, lymphoid, and non-lymphoid organs, which can be valuable for researchers studying ILCs and improves the rat model in developmental biology.
DOI: 10.6084/m9.figshare.30145906.v1
title: Supplementary Material for: Changes in Tissue-Specific Innate Lymphoid Cell Populations during Rat Development

description: Introduction: Innate lymphoid cells (ILCs) play a crucial role in immunity by regulating innate and adaptive immune cells and are involved in various physiological processes such as morphogenesis, homeostasis, metabolism, and tissue repair. ILCs are categorized into three primary subgroups: ILC1s, ILC2s, and ILC3s, which are distinguished by their functions and their production of cytokines resembling those of T helper cell subsets. The distribution of ILCs during development, particularly in rats, is not well understood. This study aims to investigate the changes in tissue-specific ILC populations throughout rat development, from embryonic days to postnatal day (PN) 30.
Methods: ILC subsets in different organs, such as the liver, lung, spleen, mesenteric lymph nodes (mLN), thymus, small intestine, and colon, were examined through surface and intracellular staining using flow cytometry (FACS Aria III).
Results: In the liver, ILC3s were most common before birth, followed by an increase in ILC1s one week after birth, and a rise in ILC2s by the end of the first month after birth. The lung showed an increase in ILC1s and NK progenitor cells after birth, with a decrease in ILC3s by the end of the first month postnatally. The spleen changed from being dominated by ILC3s in the fetal period to being dominated by ILC2s at PN30. In the mLN, ILC2s were the most common subtype throughout development. ILC3s were the main subtype in the thymus, with a decrease in NK cell representation after birth. The small intestine and colon were dominated by ILC2s, with an increase in ILC1s observed in the colon after birth.
Conclusions: This study provides insights into the changes in ILC populations during prenatal and postnatal development in rat hematopoietic, lymphoid, and non-lymphoid organs, which can be valuable for researchers studying ILCs and improves the rat model in developmental biology.
DOI: 10.15468/dl.t78wmm
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Macrochirichthys macrochirus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 7 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010053-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.udyhuw
title: Occurrence Download

description: A dataset containing 438 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leptopecten latiauratus",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is one of (Absent)"
 ]
 }
 }
 ]
}

 The dataset includes 438 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010054-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gq9uep
title: Occurrence Download

description: A dataset containing 6853 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is Israel",
 "PublishingOrg is cb633566-ed21-4684-bcce-df84d0eb4c8a",
 "Year 1948-1955"
 ]
}

 The dataset includes 6853 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010055-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h4m4pm
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tanacetum balsamita",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010057-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qucuf3
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tanacetum balsamita",
 "Country is Czechia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010056-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xdduq9
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tanacetum balsamita",
 "Country is Greece",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010058-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hqd9s5
title: Occurrence Download

description: A dataset containing 6725 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Japan",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Canis familiaris, Capra hircus, Felis catus, Mustela sibirica, Rattus rattus, Scolopax mira, Pteropus pselaphon, Goniurosaurus kuroiwae, Synthliboramphus wumizusume, Turdus celaenops, Gorsachius goisagi)"
 ]
}

 The dataset includes 6725 records from 108 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010059-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8bzfxg
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Rafflesia verrucosa (Rafflesiaceae), a new species of small-flowered Rafflesia from eastern Mindanao, Philippines"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010060-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17031/654ba91654d33
title: 2013 Marine Biological Association of the UK (MBA) Antony Lynher Estuary Transect Survey of Crassostrea gigas
title: 2013 Marine Biological Association of the UK (MBA) Antony Lynher Estuary Transect Survey of Magallana gigas

description: Transect survey of the Pacific Oyster Crassostrea gigas, now known as Magallana gigas, at Antony Lynher Estuary on the south shore of St Germans, Cornwall.  Data collected by volunteer MBA members and students searching for Pacific Oysters, counting abundance and taking shell measurements. Internal QA by Marine Biological Association staff.
DOI: 10.5281/zenodo.15008617
title: Data file and questionnaire for the article "Exploring Patients' Perspectives on Patient Rights in Latvia: From Awareness to Implementation and Strengthening"
DOI: 10.5281/zenodo.17140654
title: Data file and questionnaire for the article "Exploring Patients' Perspectives on Patient Rights in Latvia: From Awareness to Implementation and Strengthening"
DOI: 10.15468/dl.app5t9
title: Occurrence Download

description: A dataset containing 179 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Manupecten pesfelis",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is one of (Absent)"
 ]
 }
 }
 ]
}

 The dataset includes 179 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010061-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17140613
title: Hissing Predicts Lower Tonic Immobility and Higher Nest Success in the Great Tit (Parus major)

description: Antipredator behavior can vary consistently among individuals, yet links between proactive nest defense and passive fear responses are rarely quantified in the wild. We tested whether hissing, a conspicuous, snake-like bluff display at the nest, predicts tonic immobility (TI) and breeding success in Great Tits (Parus major). In pine forests in southeastern Latvia (2023–2024), we presented a taxidermic Great Spotted Woodpecker (Dendrocopos major) at nest-box entrances during incubation and scored whether females hissed and how many calls they produced. The same females were later assayed for TI by brief supine restraint when nestlings were 3–4 days old. Of 141 incubating females, 105 (74.5%) hissed. TI duration differed sharply between groups: non-hissing females showed significantly longer TI than hissing females. Nest failure was significantly lower in hissing than non-hissing nests. These results reveal a strong negative association between proactive defense and passive fearfulness, and they show that hissing can translate into higher reproductive success in a Woodpecker-dominated predator environment. We conclude that defense behaviors covary within individuals along a personality axis and that predator community composition may shape selection on these strategies.
DOI: 10.5281/zenodo.17140612
title: Hissing Predicts Lower Tonic Immobility and Higher Nest Success in the Great Tit (Parus major)

description: Antipredator behavior can vary consistently among individuals, yet links between proactive nest defense and passive fear responses are rarely quantified in the wild. We tested whether hissing, a conspicuous, snake-like bluff display at the nest, predicts tonic immobility (TI) and breeding success in Great Tits (Parus major). In pine forests in southeastern Latvia (2023–2024), we presented a taxidermic Great Spotted Woodpecker (Dendrocopos major) at nest-box entrances during incubation and scored whether females hissed and how many calls they produced. The same females were later assayed for TI by brief supine restraint when nestlings were 3–4 days old. Of 141 incubating females, 105 (74.5%) hissed. TI duration differed sharply between groups: non-hissing females showed significantly longer TI than hissing females. Nest failure was significantly lower in hissing than non-hissing nests. These results reveal a strong negative association between proactive defense and passive fearfulness, and they show that hissing can translate into higher reproductive success in a Woodpecker-dominated predator environment. We conclude that defense behaviors covary within individuals along a personality axis and that predator community composition may shape selection on these strategies.
DOI: 10.15468/dl.6kmhxr
title: Occurrence Download

description: A dataset containing 5429 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tetrao urogallus",
 "Country is Austria"
 ]
}

 The dataset includes 5429 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010062-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17090069
title: Plastic-Greenhouse-Mapping-Coupling-Prior-Knowledge-and-Deep-Learning-PGMpkdl

description: This dataset accompanies the repository PGMpk-dl and the article "A novel approach: Coupling prior knowledge and deep learning methods for large-scale plastic greenhouse extraction using Sentinel-1/2 data".

The dataset contains:



Sentinel-2 imagery for the study regions.

Ground truth labels derived from prior knowledge and manual annotation, provided in GeoTIFF format.

Corresponding RGB composites generated from Sentinel-2 bands.


Please use the linked GitHub code to complete the full processing and training pipeline.

The dataset is organized by region, and designed for research on plasticulture mapping, agricultural monitoring, and remote sensing-based land cover analysis.
DOI: 10.5281/zenodo.17139012
title: Plastic-Greenhouse-Mapping-Coupling-Prior-Knowledge-and-Deep-Learning-PGMpkdl

description: This dataset accompanies the repository PGMpk-dl and the article "A novel approach: Coupling prior knowledge and deep learning methods for large-scale plastic greenhouse extraction using Sentinel-1/2 data".

The dataset contains:



Sentinel-2 imagery for the study regions.

Ground truth labels derived from prior knowledge and manual annotation, provided in GeoTIFF format.

Corresponding RGB composites generated from Sentinel-2 bands.


Please use the linked GitHub code to complete the full processing and training pipeline.

The dataset is organized by region, and designed for research on plasticulture mapping, agricultural monitoring, and remote sensing-based land cover analysis.
DOI: 10.15468/dl.p29b8v
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Diapoma alegretense)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 17 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010066-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5379j2
title: Occurrence Download

description: A dataset listing the 4646 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen, Living Specimen, Occurrence evidence)",
 "Continent is Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Poaceae",
 "Year 1950-2025"
 ]
}

 The dataset's 4646 records were derived from 448 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010044-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17050382
title: Supplementary Dataset for "A Systems Biology Framework to identify Key Molecular Targets and Their Associated Drugs to Modulate Angiogenesis in Diabetic Retinopathy"

description:  



This Excel file contains the raw and processed data supporting the findings of the manuscript “A Systems Biology Framework to Identify Key Molecular Targets and Their Associated Drugs to Modulate Angiogenesis in Diabetic Retinopathy.” It includes the retrieved gene expression data from the GEO database, regulatory network data, drug-gene interaction network data, and all analyses leading to the identification of key genes and their associated drugs.
DOI: 10.5281/zenodo.17050383
title: Supplementary Dataset for "A Systems Biology Framework to identify Key Molecular Targets and Their Associated Drugs to Modulate Angiogenesis in Diabetic Retinopathy"

description:  



This Excel file contains the raw and processed data supporting the findings of the manuscript “A Systems Biology Framework to Identify Key Molecular Targets and Their Associated Drugs to Modulate Angiogenesis in Diabetic Retinopathy.” It includes the retrieved gene expression data from the GEO database, regulatory network data, drug-gene interaction network data, and all analyses leading to the identification of key genes and their associated drugs.
DOI: 10.15468/dl.zh75tm
title: Occurrence Download

description: A dataset containing 62612195 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "Year 2000-2025"
 ]
}

 The dataset includes 62612195 records from 1642 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009829-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.foxncj
title: Occurrence Download

description: A dataset containing 1474 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calibrachoa parviflora (Juss.) D' Arcy"
 ]
}

 The dataset includes 1474 records from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009616-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.guxhb8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "ScientificName is Zamia nesophila A.S.Taylor",
 "ScientificName is J.L.Haynes & Holzman"
 ]
 },
 "DecimalLatitude is greater than or equal to -90",
 "DecimalLongitude is greater than or equal to -180"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029156-191105090559680/datasets/export for details.
DOI: 10.15468/dl.8ayshx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mayomyzonidae"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058679-210914110416597/datasets/export for details.
DOI: 10.15468/dl.afrpzk
title: Occurrence Download

description: A dataset containing 4530 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Botaurus pinnatus (Wagler, 1829)"
 ]
}

 The dataset includes 4530 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051053-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hgskv7
title: Occurrence Download

description: A dataset containing 584 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Literature Occurrence",
 "Country is Thailand"
 ]
}

 The dataset includes 584 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022051-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2xgtre
title: Occurrence Download

description: A dataset containing 3647 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Funastrum cynanchoides (Decne.) Schltr.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3647 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058700-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e9xh5t
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Material sample"
 ]
 },
 "Country is Mexico",
 "TaxonKey is Lobelia purpusii Brandegee"
 ]
}

 The dataset includes 68 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042861-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nav9q2
title: Occurrence Download

description: A dataset containing 218175 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solanum nigrum L."
 ]
}

 The dataset includes 218175 records from 879 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061561-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yn8pen
title: Occurrence Download

description: A dataset containing 1608 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Platalea leucorodia Linnaeus, 1758"
 ]
}

 The dataset includes 1608 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087346-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v7aajk
title: Occurrence Download

description: A dataset containing 104 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Astylus atromaculatus (Blanchard, 1843)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 104 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051042-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.