cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14769054
title: Grouned-Video-Entity Linking

description: <b>ActivityNet-EKG: A resource for Video-Textual-Knowledge-Entity Linking</b> <br><br>To understand the content of a document, consist of a video and some textual descriptions, an artificial agent will need to recognized jointly both the entities shown in the video and mentioned in the text, and to link them with its background knowledge. This is an important but at the same time a complex task, that we called Video-Textual-Knowledge-Entity-Linking (ViTEL). The ViTEL task aims to links both the video and textual entity mentions with the<br>corresponding entity (candidate) of a knowledge-base (Ontology). Solving this problem will open a wide range of opportunities to improve and integrate the scientific community of multimedia and semantic web for solving different tasks efficiently. In this project, we proposed ActivityNet-EKG (ActivityNet-Entity-Knowledge-Graph)<br>dataset, consisting of video clips, corresponding descriptions (captions), in which aligned visual and textual entity mentions are both annotated with the corresponding entities typed (class) according to DBpedia [1], and Wikidata [41] knowledge-bases. The ActivityNetEKG dataset can be used for training and evaluating algorithms<br>solving the problem of Video-Textual-Knowledge-Entity-Linking. <br><br>
DOI: 10.6084/m9.figshare.14769054.v1
title: Grouned-Video-Entity Linking

description: Knowledge-Graphs-based benchmark dataset, by using the ActivityNet-Entity dataset.
DOI: 10.15129/d95ab347-9207-457a-8fc7-66c3bedbf697
title: Data for: "Toward Physics-Based Solubility Computation for Pharmaceuticals to Rival Informatics"

description: This dataset contains raw data for hydration and sublimation free energy calculations used to calculate intrinsic aqueous solubility. The sublimation folder contains output text files from Castep and Gaussian. The hydration folder contains output text files from Gaussian and Gromacs.
DOI: 10.5281/zenodo.5006242
title: AMS dataset

description: Dataset for AMS
DOI: 10.5281/zenodo.5006241
title: AMS dataset

description: Dataset for AMS
DOI: 10.6073/pasta/973b9bb0f2ac4d9dbf0be11a2f1a6cf1
title: Stream Macroinvertebrates in Hemlock and Deciduous Watersheds at Harvard Forest 2005-2007

description: Tsuga canadensis (Eastern Hemlock) is a common forest species that is declining throughout its range in the eastern United States because of the invasion of an exotic forest pest, Adelges tsugae (Hemlock Woolly Adelgid). This pest kills infected trees, and over time, infected stands are replaced by deciduous forests. The conversion of forests from Hemlock to deciduous species is predicted to impact the hydrology, chemistry, and biology of associated headwater streams. In this study, we examined the macroinvertebrate communities of two adjacent headwater streams with differing Hemlock influence in central Massachusetts. Abundance, taxa richness, diversity, and unique taxa were generally greater in the deciduous stream. Differences in the distribution of functional feeding groups were observed: the Hemlock stream had a greater percentage of collector-gatherers while the deciduous stream had a greater percentage of shredders and predators. These findings suggest that macroinvertebrate communities in streams draining Hemlock and deciduous watersheds may differ in structure and function, and that anticipated Hemlock mortality may impact the region’s stream ecology.
DOI: 10.6073/pasta/28de69a5338281606b05188648ab05ba
title: Lysimeter chemistry from the Ice Storm Experiment (ISE) at the Hubbard Brook Experimental Forest

description: An ice storm simulation was performed at the Hubbard Brook Experimental Forest to evaluate impacts of these extreme weather events on northern hardwood forests. Water was pumped from the main branch of Hubbard Brook and sprayed above the forest canopy in subfreezing conditions so that it rained down and froze on contact with trees. The experiment included five ice storm intensities (0, 6.4, 12.7 and 19.1 mm radial ice accretion) applied in a single year, and one ice storm intensity (12.7 mm) applied in two consecutive years. Samples of soil solution chemistry were collected with lysimeters throughout the year before and after the ice was applied. These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.
DOI: 10.5281/zenodo.5006415
title: Dataset for submission of "Correction of river bathymetry parameters using the stage–discharge rating curve"

description: Dataset for submission of "Correction of river bathymetry parameters using the stage–discharge rating curve".
DOI: 10.5281/zenodo.5006414
title: Dataset for submission of "Correction of river bathymetry parameters using the stage–discharge rating curve"

description: Dataset for submission of "Correction of river bathymetry parameters using the stage–discharge rating curve".
DOI: 10.6084/m9.figshare.14815728
title: Supplemental Materials from Predictors of oxidative stress in youth with Type 1 Diabetes.

description: Supplementary Table 1: mean concentrations of d-ROMs across the genotypes of rs2364723 and rs6721961.<b></b>Supplementary table 2: 2-week glycemic metrics across genders and their associations with d-ROMs.<b></b>Supplementary table 3: 4-week glycemic metrics across genders and their associations with d-ROMs.<b></b>
DOI: 10.6073/pasta/94e4cf991133c4cf190db70887d57300
title: 1830 Map of Land Cover and Cultural Features in Massachusetts

description: Background and Data Limitations The Massachusetts 1830 map series represents a unique data source that depicts land cover and cultural features during the historical period of widespread land clearing for agricultural. To our knowledge, Massachusetts is the only state in the US where detailed land cover information was comprehensively mapped at such an early date. As a result, these maps provide unusual insight into land cover and cultural patterns in 19th century New England. However, as with any historical data, the limitations and appropriate uses of these data must be recognized: (1) These maps were originally developed by many different surveyors across the state, with varying levels of effort and accuracy. (2) It is apparent that original mapping did not follow consistent surveying or drafting protocols; for instance, no consistent minimum mapping unit was identified or used by different surveyors; as a result, whereas some maps depict only large forest blocks, others also depict small wooded areas, suggesting that numerous smaller woodlands may have gone unmapped in many towns. Surveyors also were apparently not consistent in what they mapped as ‘woodlands’: comparison with independently collected tax valuation data from the same time period indicates substantial lack of consistency among towns in the relative amounts of ‘woodlands’, ‘unimproved’ lands, and ‘unimproveable’ lands that were mapped as ‘woodlands’ on the 1830 maps. In some instances, the lack of consistent mapping protocols resulted in substantially different patterns of forest cover being depicted on maps from adjoining towns that may in fact have had relatively similar forest patterns or in woodlands that ‘end’ at a town boundary. (3) The degree to which these maps represent approximations of ‘primary’ woodlands (i.e., areas that were never cleared for agriculture during the historical period, but were generally logged for wood products) varies considerably from town to town, depending on whether agricultural land clearing peaked prior to, during, or substantially after 1830. (4) Despite our efforts to accurately geo-reference and digitize these maps, a variety of additional sources of error were introduced in converting the mapped information to electronic data files (see detailed methods below). Thus, we urge considerable caution in interpreting these maps. Despite these limitations, the 1830 maps present an incredible wealth of information about land cover patterns and cultural features during the early 19th century, a period that continues to exert strong influence on the natural and cultural landscapes of the region. Acknowledgements Financial support for this project was provided by the BioMap Project of the Massachusetts Natural Heritage and Endangered Species Program, the National Science Foundation, and the Andrew Mellon Foundation. This project is a contribution of the Harvard Forest Long Term Ecological Research Program.
DOI: 10.25625/j3zojc/i65cqo
title: Soil_data.tab

description: Raw soil and org. litter analysis data
DOI: 10.25625/j3zojc/zaup3n
title: Wood_densities.tab

description: wood densities
DOI: 10.25625/j3zojc/xfvcjf
title: Forest_inventory_data.tab

description: Raw forest inventory data
DOI: 10.25625/j3zojc
title: Replication Data for: Climate warming-induced replacement of mesic beech by thermophilic oak forests will reduce the carbon storage potential in aboveground biomass and soil.

description: We investigated carbon pools in soil and biomass together with soil chemical conditions along three transects in the natural ecotone from mesic beech forests to more xeric oak forests in western Romania with the aim to quantify changes in ecosystem carbon storage, which could result from a shift from beech to oak forests as a consequence of climate warming. We find that the ecosystem carbon pool is reduced by about 55 Mg C ha-1 upon the replacement of beech by oak forests, which could occur either naturally in the course of succession or due to the choice of more drought tolerant tree species by foresters.
DOI: 10.5281/zenodo.5006428
title: Surveying the communities of users of MATLAB and similar languages (Responses)

description: This upload includes responses gathered from a survey applied to the users of MATLAB and its clone languages. It covers the participants' programming experience, how they interact with these languages, the importance they give to the reusability of their programs, object-oriented programming and how satisfied they are with these languages.
DOI: 10.5281/zenodo.5006427
title: Surveying the communities of users of MATLAB and similar languages (Responses)

description: This upload includes responses gathered from a survey applied to the users of MATLAB and its clone languages. It covers the participants' programming experience, how they interact with these languages, the importance they give to the reusability of their programs, object-oriented programming and how satisfied they are with these languages.
DOI: 10.5257/oecd/mei/2021-06
title: Main Economic Indicators (MEI) (June 2021 Edition)

description: The Main Economic Indicators database includes a wide range of areas from 1961, such as quarterly national accounts, business surveys, retail sales, industrial production, construction, consumer prices, total employment, unemployment rates, interest rates, money and domestic finance, foreign finance, foreign trade, and balance of payments for OECD countries and non-member economies.
DOI: 10.6073/pasta/b8d445061e2e080bdf202112b13f06a2
title: Canopy LiDAR Measurements in Hemlock Removal Experiment at Harvard Forest 2005

description: As the ecological functioning of a forest stand is often related to the spatial organization of the canopy, we used a portable canopy LiDAR (PCL; Parker et al. 2004) to measure volumetric canopy structure in the simulated HWA management treatments. In September and October 2005, prior to leaf abscission, we set up 16 parallel transects spaced 2 meters apart in the 900 m2 (30 x 30 m) interior of each of the eight treatment plots. The orientation of the transects were either north-south or east-west to minimize the difficulty of traversing the stand. The distances to canopy surfaces more than1 m above the ground along the transects were recorded with the PCL. Assuming a constant horizontal sampling rate, the continual height measures were binned into 1 m intervals. From these measures, vertical canopy profiles, canopy openness, canopy rugosity, and other metrics related to the three-dimensional structure of the canopy can be derived. These canopy measures will be repeated minimally at 5 and 15 year intervals to develop an understanding of early structural dynamics and micrometeorological consequences associated with the simulated HWA treatments. (Parker, G.G., D.J. Harding, and M.L. Berger. 2004. A portable LIDAR system for rapid determination of forest canopy structure. Journal of Applied Ecology 41, 755-767).
DOI: 10.5281/zenodo.4774375
title: A Hierarchical Network-Oriented Analysis of UserParticipation in Misinformation Spread on WhatsApp

description: #Authors: Gabriel Peres Nobre, Carlos Henrique Gomes Ferreira, Jussara Marques de Almeida<br> #2021 Script to read a Database file of messages and, in the end, extract user communities based on content co-sharing. We provide a database file with the anonymized messages shared in WhatsApp.
DOI: 10.5281/zenodo.4774374
title: A Hierarchical Network-Oriented Analysis of UserParticipation in Misinformation Spread on WhatsApp

description: #Authors: Gabriel Peres Nobre, Carlos Henrique Gomes Ferreira, Jussara Marques de Almeida<br> #2021 Script to read a Database file of messages and, in the end, extract user communities based on content co-sharing. We provide a database file with the anonymized messages shared in WhatsApp.
DOI: 10.6073/pasta/1f23b4f6f59a772411acb9053671ea74
title: Deer and Moose Browsing in Hemlock Removal Experiment at Harvard Forest 2008

description: Hemlock decline in New England is caused by direct and indirect effects of invasion of the hemlock woolly adelgid. Direct damage from the insect is causing gradual mortality of hemlock, and widespread harvesting of hemlock in advance of mortality, in contrast, causes immediate mortality and removal of biomass from the site. Although both processes affect thousands of acres of forest annually we have only a limited understanding of their effects on forest ecosystem function and productivity and the nature of the subsequent forest community. We anticipate that harvesting will yield different consequences than gradual mortality from the insect. Therefore we designed an experiment to simulate these contrasting impacts, by logging or girdling hemlock stands. Results from the experimental treatments will be compared to the changes observed in forests that are being infested by the adelgid, and can also be included in integrated analyses of a suite of large experiments that form a core component of the Harvard Forest LTER program. Deer and moose foraging can play a key role in shaping forest regeneration after disturbance in temperate forest. In 2008, we initiated a browsing survey of woody stems in the Simes hemlock removal experiment plots. There are regular moose sightings in the study area, and moose pellets are commonly found within the plots. Also, extensive browsing of tree regeneration in the logged plots was noted starting in 2007. Sampling of the 8 study plots was completed in Summer 2008. The next sampling is tentatively scheduled for Summer 2013.
DOI: 10.6073/pasta/deeb00bbe016f16d2a936d3e73aab101
title: Coarse Woody Debris in Hemlock Removal Experiment at Harvard Forest since 2005

description: The woody detritus survey is designed to measure coarse woody detritus that includes snags, logs, and stumps, and to estimate fine woody detritus which includes smaller pieces of downed wood. To capture both standing and downed wood, we based our survey around two main types of methods, the line intercept method and the fixed radius plot method. Surveys have been completed for 2005, 2007, 2009, 2011, 2013, 2015 and 2017.
DOI: 10.21227/m1t7-hg51
title: Labour Inspection Checklist Content

description: The data set contains inspections conducted by the Norwegian Labour Inspection Authority between 2012 and 2019
DOI: 10.6084/m9.figshare.14815707
title: Scofield.csv

description: Data in csv format
DOI: 10.6084/m9.figshare.14815707.v3
title: Scofield.csv

description: Data in csv format
DOI: 10.6084/m9.figshare.14815707.v2
title: Scofield.csv

description: Data in csv format
DOI: 10.5286/isis.e.rb1820205-2
title: Interplay between magnetism and superconductivity in the FeYSr2Cu2Oy iron substituted cuprate

description: We want to address the problem of a possible coexistence of superconductivity and magnetism in the FeSr2YCu2Oy cuprate by means of a combined ZF/TF-muSR study. This compound presents a laminar ordering of copper and iron along the crystallographic c axis, allowing the study of the iron oxidation state effect in the superconducting and magnetic properties of this material. We have observed a progressive evolution from a magnetic parent compound at low doping levels to a bulk superconducting phase after ozone treatment. We aim here to characterize by ZF-muSR the temperature and doping dependence of the magnetic interactions, in order to resolve whether these interactions precede or compete with superconductivity. For this purpose, the real superconducting volume fractions are to be also determined by a TF-muSR measurement of the magnetic penetration depth.
DOI: 10.6084/m9.figshare.14815818.v1
title: MS_data Normoxic limitation of maximal oxygen consumption rate, aerobic scope and cardiac performance in exhaustively exercised rainbow trout (Oncorhynchus mykiss).docx.pdf

description: Data for "<i>Normoxic limitation of maximal oxygen consumption rate, aerobic scope and cardiac performance in exhaustively exercised rainbow trout (Oncorhynchus mykiss)"</i>
DOI: 10.6084/m9.figshare.14815818
title: MS_data Normoxic limitation of maximal oxygen consumption rate, aerobic scope and cardiac performance in exhaustively exercised rainbow trout (Oncorhynchus mykiss).docx.pdf

description: Data for "<i>Normoxic limitation of maximal oxygen consumption rate, aerobic scope and cardiac performance in exhaustively exercised rainbow trout (Oncorhynchus mykiss)"</i>
DOI: 10.5517/ccdc.csd.cc26pln5
title: CCDC 2046547: Experimental Crystal Structure Determination

description: Related Article: wenyu Mou|2020|CSD Communication|||
description: Related Article: Wen-Yu Mou, Bin Xie, Xiao-Long Li, Chuan Lai, Tao Li, Luo Chen, Jian-Shen Feng, Xiao-Xue Bai, Yu Wu, Wei-Ping Wu, Dong-Liang Zhang, Yun-Tian Gu|2021|New J.Chem.|45|10930|doi:10.1039/D1NJ01540K
DOI: 10.5517/ccdc.csd.cc26plp6
title: CCDC 2046548: Experimental Crystal Structure Determination

description: Related Article: wenyu Mou|2020|CSD Communication|||
description: Related Article: Wen-Yu Mou, Bin Xie, Xiao-Long Li, Chuan Lai, Tao Li, Luo Chen, Jian-Shen Feng, Xiao-Xue Bai, Yu Wu, Wei-Ping Wu, Dong-Liang Zhang, Yun-Tian Gu|2021|New J.Chem.|45|10930|doi:10.1039/D1NJ01540K
DOI: 10.5517/ccdc.csd.cc26tfgy
title: CCDC 2050230: Experimental Crystal Structure Determination

description: Related Article: Yanxiong Pan, Hui Li, Mary Lenertz, Yulun Han, Angel Ugrinov, Dmitri Kilin, Bingcan Chen, Zhongyu Yang|2021|Green Chemistry|23|4466|doi:10.1039/D1GC00775K
DOI: 10.6084/m9.figshare.14815707.v1
title: Scofield.csv

description: Data in csv format
DOI: 10.25345/c58v5h
title: MassIVE MSV000087674 - 5593 ABL HER2 RNA Binding Protein Gel Bands
title: For gel band analysis, SDS-PAGE gel bands were subjected to reduction, alkylation, and in-gel tryptic digestion as described here: https://genome.duke.edu/sites/genome.duke.edu/files/In-gelDigestionProtocolrevised_0.pdf. Digested peptides were lyophilized to dryness and resuspended in 12 uL of 0.2% formic acid/2% acetonitrile. Each sample was subjected to chromatographic separation on a Waters NanoAquity UPLC equipped with a 1.7 um HSS T3 C18 75 um I.D. x 250 mm reversed-phase column (NanoFlow data). The mobile phase consisted of (A) 0.1% formic acid in water and (B) 0.1% formic acid in acetonitrile. 3 uL was injected and peptides were trapped for 3 min on a 5 um Symmetry C18 180 um I.D. x 20 mm column at 5 ul/min in 99.9% A. The analytical column was then switched in-line and a linear elution gradient of 5% B to 40% B was performed over 30 min at 400 nL/min. The analytical column was connected to a Fusion Lumos mass spectrometer (Thermo) through an electrospray interface operating in a data-dependent mode of acquisition. The instrument was set to acquire a precursor MS scan from m/z 375-1500 at R=120,000 (target AGC 2e5, max IT 50 ms) with MS/MS spectra acquired in the ion trap (target AGC 5e3, max IT 100 ms). For all experiments, HCD energy settings were 30v and a 20 s dynamic exclusion was employed for previously fragmented precursor ions. Raw LC-MS/MS data files were processed in Proteome Discoverer (Thermo Scientific) and then submitted to independent Mascot searches (Matrix Science) against a Human protein database containing both forward (20260 entries) and reverse entries of each protein. Search tolerances were 5 ppm for precursor ions and 0.8 Da for product ions using trypsin specificity with up to two missed cleavages. Carbamidomethylation (+57.0214 Da on C) was set as a fixed modification, whereas oxidation (+15.9949 Da on M) and deamidation (+0.98 Da on NQ) were considered a dynamic mass modifications. All searched spectra were imported into Scaffold (v4.4, Proteome Software) and scoring thresholds were set to achieve a peptide false discovery rate of 1% using the PeptideProphet algorithm.
DOI: 10.5281/zenodo.4739024
title: Dataset from "The story of a steep river: causes and effects of the flash flood on 24 July 2017 in western Norway"

description: All the data needed to build a numerical model of the study case described in the manuscript "The story of a steep river: causes and effects of the flash flood on 24 July 2017 in western Norway", including the shapefiles of roads, buildings, bridges, the dimensions and openings of the three still-standing bridges (a, b, d) as measured after the flood, the location of the dam weir crest used for the estimation of the flood hydrograph in Bruland (2020), the hydrograph with the highest expectancy proposed therein, as well as pre- and post-event DEMs, orthophotos and catchment area publicly available on https://hoydedata.no/LaserInnsyn/ and https://norgeibilder.no/ and http://nevina.nve.no/ are provided in this dataset. Moreover, all the results presented in the manuscript of the original study and usable for model calibration and validation, such as the preferential flow paths, the main critical points and the mapped wet and dry areas during the 2017 flood (both at Q<sub>peak</sub> and the maximum for the entire event) are also provided in this data set.
description: This data set was confectioned with funding from the World of Wild Waters project, under the umbrella of the Norwegian University of Science and Technology (NTNU)'s Digital Transformation initiative.
description: {"references": ["Bruland, O. (2020). How extreme can unit discharge become in steep Norwegian catchments? Hydrology Research, 51(2), 290\u2013307. https://doi.org/10.2166/nh.2020.055", "Norwegian Mapping Authority (2013). Digital Elevation Model (DEM) Stryn, resolution 0.5m. https://hoydedata.no/LaserInnsyn/", "Norwegian Mapping Authority (2017). Digital Elevation Model (DEM) NVE laser flaum Utvik i Stryn, resolution 0.25m. https://hoydedata.no/LaserInnsyn/", "Norwegian Mapping Authority (2015). Orthophotographs Sogn, pixel size 0.25m (online). https://norgeibilder.no/", "Norwegian Mapping Authority (2017). Orthophotographs Flaum Storelva Utvik, pixel size 0.1m (online). https://norgeibilder.no/", "Norwegian Water and Energy Directorate. NEVINA Nedb\u00f8rfelt-Vannf\u00f8ring-INdeks-Analyse (NEVINA Catchment area-Water Flow-Index-Analysis) Available online: http://nevina.nve.no/ (accessed on Mar 26, 2019)"]}