cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7929/issda/fgkmrn
title: The Intellectual Disability Supplement to the Irish Longitudinal Study on Ageing (IDS-TILDA) Wave 4, Covid-19 Phase 1 data, 2020

description: The Intellectual Disability Supplement to the Irish Longitudinal Study on Ageing (IDS-TILDA) is a longitudinal study researching ageing in Ireland among people with an intellectual disability aged 40 and over. This study is the first of its kind in Europe, and the only study able to directly compare the ageing of people with an intellectual disability with the general ageing population. The underpinning values of IDS-TILDA are inclusion, choice, empowerment, person centred, the promotion of people with intellectual disability, the promotion of best practice and to contribute to the lives of people with intellectual disability. The objectives of IDS-TILDA are: to understand the health characteristics of people ageing with an intellectual disability; to examine the service needs and health service utilization of people ageing with an intellectual disability; to identify disparities in the health status of adults with an intellectual disability as compared to The Irish Longitudinal Study on Ageing’s (TILDA) findings for the general population; and to support evidence-informed policies, practices and evaluation Given the emerging scale and seriousness of the COVID-19 crisis, and the lack of knowledge at that time about its potential impact among people with intellectual disability, there was an urgency to disseminate knowledge about how the virus and its associated public health measures was impacting people with an intellectual disability in Ireland. The first IDS-TILDA COVID-19 survey was developed to assess rates of symptoms and testing, morbidity and treatment, stress and anxiety associated with the pandemic, and any positive outcomes experienced by individuals during the lockdown period. Data were collected between May and September 2020, when Ireland experienced its first wave of infection and first lockdown measures. These data were supplemented with health data from the main IDS-TILDA study, to explore associations with disease morbidity and other health and well-being outcomes, to consider potential predictors of symptoms and COVID positivity and of differences in people’s lives, before and during COVID-19 restrictions.
DOI: 10.25549/inscriptifact-ouc110825505
title: Persepolis Fortification Elamite Tablet 2293.104, Fort 2293.104

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] Fort 2293.104 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on left edge, reverse. ❧ [Physical Object Note:] Large pieces of lower tablet missing, leaving only part of the bottom edge. Right edge broken.
DOI: 10.25549/inscriptifact-ouc110825761
title: Persepolis Fortification Elamite Tablet 2293.104, Fort 2293.104

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] Fort 2293.104 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on left edge, reverse. ❧ [Physical Object Note:] Large pieces of lower tablet missing, leaving only part of the bottom edge. Right edge broken.
DOI: 10.25549/inscriptifact-ouc110825807
title: Persepolis Fortification Elamite Tablet 2293.104, Fort 2293.104

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] Fort 2293.104 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on left edge, reverse. ❧ [Physical Object Note:] Large pieces of lower tablet missing, leaving only part of the bottom edge. Right edge broken.
DOI: 10.25549/inscriptifact-ouc110825804
title: Persepolis Fortification Elamite Tablet 2293.104, Fort 2293.104

description: [Text Description:] Administrative text with seals ❧ [Text or Publication Number Note:] Fort 2293.104 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on left edge, reverse. ❧ [Physical Object Note:] Large pieces of lower tablet missing, leaving only part of the bottom edge. Right edge broken.
DOI: 10.5281/zenodo.17592480
title: Supplementary files for "Integrative systematics reveals new brachypterous genera and sheds light on hind wing evolution in the Neotropical lineage of Philonthina (Coleoptera: Staphylinidae)"

description: Note on Nomenclature

These files are the supplementary materials for the publication: "Integrative systematics reveals new brachypterous genera and sheds light on hind wing evolution in the Neotropical lineage of Philonthina (Coleoptera: Staphylinidae)” by Maryzender E. Rodríguez-Melgarejo, José M. Ramírez-Salamanca & Mariana R. Chani-Posse, published in Invertebrate Systematics.

Users should be aware that during the peer-review process of our manuscript, a systematic revision was published that affects one of the species in our analysis. Consequently, while the main text of our article uses the updated name Yuracarus diamantinus, the original name Philonthus diamantinus was used for the analyses and is retained here in these supplementary files.

The citation for the taxonomic change is: Chani-Posse, M. R., Rodríguez-Melgarejo, M. E., & Ramírez-Salamanca, J. M. (2025). Systematics and phylogeny of the Andean genera Konradus Chani-Posse & Ramírez-Salamanca and Yuracarus gen. nov.(Coleoptera: Staphylinidae). Arthropod Systematics & Phylogeny, 83, 331-352. doi: 10.3897/asp.83.e150304
description: Supplementary file S0.  Zipped folder containing: 

- Supplementary Table S1. List of species and genes included in the phylogenetic analysis, including the GenBank accession numbers and distribution data in Excel spreadsheet format.

- Supplementary Figure S1. Probability of wing development (0 – macropterous and 1 – brachypterous) for the internal nodes of NT lineage of Philonthina mapped onto the Bayesian inference total evidence topology under Bayesian reconstruction.

- Supplementary Table S2. Statistical proportion of internal nodes with probability of being: 0 – macropterous and 1 – brachypterous with tree plot (pie charts) above.

Supplementary file S1. Morphological dataset in Nexus format.

Supplementary file S2. Molecular dataset in Fasta format.

Supplementary file S3. Combined dataset in Nexus format.

Supplementary file S4. Zipped folder containing the combined dataset topologies recovered by BI, ML and MP and its corresponding supports.

Supplementary file S5. Zipped folder containing the molecular dataset topologies and supports recovered by BI, ML and MP.

Supplementary file S6. Zipped folder containing the morphological dataset topologies and supports recovered by BI, ML and MP.
DOI: 10.60698/d633d702-4e82-4652-b874-3402028d92bd
title: Eu Ecosystem Typology level 3

description: This dataset defines the ecosystem typology of the Portuguese maritime areas according to the Eu Ecosystem Typology level 3.

The EU Ecosystem Typology Level 3 refers to a classification system used within the European Union's framework for mapping and assessing ecosystems and their services, primarily under the Mapping and Assessment of Ecosystems and their Services (MAES) initiative.

The mapping between EUSeaMap (EUNIS-based, 22 classes) and the EU Ecosystem Typology Level 3 (EUROSTAT/MAES, 4 classes) enables the integration of detailed benthic habitat data into ecosystem accounting frameworks. This correspondence supports consistent reporting and valuation of marine ecosystem services within the SEEA EA, particularly for the development of Marine Ecosystem Satellite Accounts.

This dataset is part of the High Value/HVD Datasets identified in accordance with Implementing Regulation No. 2023/138 of Directive (EU) 2019/1024 on open data and the reuse of public sector information.
DOI: 10.15468/dl.jg9umn
title: Occurrence Download

description: A dataset containing 10304 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Meruliopsis taxicola (Pers.) Bondartsev"
 ]
}

 The dataset includes 10304 records from 169 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0014895-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29118284
title: Clinical Value of Pelvic Floor Ultrasound and Glazer Pelvic Floor Electromyography in Predicting Postpartum Stress Urinary Incontinence

description: Abstract：Objective:Based on pelvic floor ultrasound and Glazer pelvic floor surface electromyography parameters in postpartum patients with stress urinary incontinence (SUI), to establish a model and explore its clinical value in predicting the disease.Methods:A total of 193 postpartum women admitted to our hospital were enrolled and divided into the SUI group (67 cases) and non-SUI group (126 cases) according to the occurrence of SUI at 6-8 weeks postpartum．Clinical data, three-dimensional pelvic floor ultrasound parameters，and Glazer pelvic floor sEMG parameters were collected from both groups．Univariate and multivariate analyses were performed to screen independent factors，based on which a nomogram model was established. Receiver operating characteristic (ROC) curves and clinical decision curves were plotted．Results：Significant differences were observed between the two groups in neonatal body weight，maternal weight at follow-up, bladder neck mobility (BNM)，urethral rotation angle(URA), posterior vesicourethral angle(PVA)，levator hiatus area(LHA) ，pelvic floor fast contraction force，tonic contraction force，and endurance (all P&lt;0.05)．Multivariate analysis identified URA，PVA，pelvic floor fast contraction force，tonic contraction force，and endurance as independent risk factors for SUI．The ROC curve showed an area under the curve (AUC) of 0.838．The decision curve indicated that the net benefit curve was higher than both the "All" line and the "None" line．Conclusion：The established model demonstrates high predictive value for postpartum SUI．The combination of pelvic floor ultrasound and Glazer pelvic floor electromyography can improve the diagnostic accuracy of SUI．
DOI: 10.15468/dl.hcxxn7
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sus barbatus Müller, 1838",
 "Year 1981-2010"
 ]
}

 The dataset includes 32 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003037-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/vcac5-rmz28
title: nanowire+doublepili mutant+Chemo

description: This sample is batch 2 collection. This is from double pili mutant run on a chemostat.Batch 1 collection was from WT grown in serum bottle
description: <strong>Tilt Series Date:</strong> 2015-04-12</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Shewanella oneidensis</p>
<strong>Strain:</strong> MR-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Moh, USC</p>
<strong>Sample Preparation:</strong> Went to USC and froze using manual vitrobot. Only 1 grid was good among 6 and cells were isolated so couldn't detect any nanowires so far</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-04-12-13/rawdata/</p>3_atlas_nanowires0012.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-04-12-13/rawdata/3_atlas_nanowires0012.mrc"
        > <i class="download icon"></i> Download </a></p>

        3_atlas_nanowires0012_full.rec,  Reconstruction (Pixel Size 1.92 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-04-12-13/3dimage_53880/3_atlas_nanowires0012_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ezwex-cbk87
title: WT LP01 from Liu lab, Yale

description: Type four secretion system, T4SS
description: <strong>Tilt Series Date:</strong> 2016-11-28</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-51.0°, 51.0°), step: 3°, constant angular increment, dosage: 50.0 eV/Å²,  defocus: -5.0 μm,  magnification: 15500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Data collected by Bo Hu in Jun Liu lab at Yale from their Polara. Partial WT strain data set. Primary literature:  doi: 10.1038/s41564-018-0165-z</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-488/rawdata/</p>T4SSWTminiNov21A023_driftcorr.mrc,  Tilt Series (Pixel Size 0.25 nm), 2.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-488/rawdata/T4SSWTminiNov21A023_driftcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        T4SSWTminiNov21A023_driftcorr.rec,  Reconstruction (Pixel Size 1.0 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-488/3dimage_105209/T4SSWTminiNov21A023_driftcorr.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/w1qbe-wvw33
title: pED208_6um

description: t4ss in E.colli with F pilus
description: <strong>Tilt Series Date:</strong> 2015-02-11</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> LB o/n 37C</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-02-11-51/rawdata/</p>pED-6um-20017.mrc,  Tilt Series (Pixel Size 0.5 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-02-11-51/rawdata/pED-6um-20017.mrc"
        > <i class="download icon"></i> Download </a></p>

        pED-6um-20017_full.rec,  Reconstruction (Pixel Size 2.0 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-02-11-51/3dimage_51807/pED-6um-20017_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/pq2nv-gtf35
title: Mycobacterium marinum

description: Grown on 2x LB to induce sporulation
description: <strong>Tilt Series Date:</strong> 2015-10-13</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Mycobacterium marinum</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Will DePas from Dianne Newman's lab grew the cells</p>
<strong>Sample Preparation:</strong> Cells were frozen with Vitrobot Mark 4. Grids were positively glow discharged.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-10-13-3/3dimage_70173/</p>Mmarinum_oct20150033.rec,  Reconstruction (Pixel Size 1.92 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-10-13-3/3dimage_70173/Mmarinum_oct20150033.rec"
        > <i class="download icon"></i> Download </a></p>

        Mmarinum_oct20150033.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2015-10-13-3/rawdata/Mmarinum_oct20150033.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/xsv44-m3790
title: T5_wt_control_Aumalemaide_5nm

description: This is a wt sample in which Mini cells have been isolated by high speed centrifugation and cells are Au malemaide labelled. This is a control sample. No fiducials added.
description: <strong>Tilt Series Date:</strong> 2017-02-14</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> EC93 stick, UPEC536</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> autoPatch</p>
<strong>Collaborators and Roles:</strong> Zach Ruhe and Chris hayes</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Freezing in vitrobot. Humidifier was not working. I wouldn't really trust the conditions.</p>
<strong>Sample Preparation:</strong> Sample prepared by Taylor Steven</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-02-14-2/rawdata/</p>sq90002.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-02-14-2/rawdata/sq90002.mrc"
        > <i class="download icon"></i> Download </a></p>

        sq90002.rec,  Reconstruction (Pixel Size 1.56 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-02-14-2/3dimage_82394/sq90002.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.8a2pgb
title: Occurrence Download

description: A dataset containing 11759709 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Hesperiidae, Nymphalidae, Papilionidae, Pieridae, Lycaenidae, Riodinidae)",
 "Year 2001-2010"
 ]
}

 The dataset includes 11759709 records from 1590 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045088-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ddxwn
title: Occurrence Download

description: A dataset containing 3310 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Clarkia pulchella"
 ]
}

 The dataset includes 3310 records from 165 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016284-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dxvgx8
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "Country is Japan",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is CC-BY-NC 4.0",
 "OccurrenceStatus is Present",
 "TaxonKey is Rana japonica"
 ]
}

 The dataset includes 95 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016285-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m8q78a
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Haemaphysalis colasbelcouri"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016286-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18278523
title: Mainz-Bischofsheim, Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).