cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.18430/m39doc
title: X-ray diffraction data for the the von Willebrand factor A domain of human capillary morphogenesis gene II, flexibly fused to the 1TEL crystallization chaperone, Thr-Val linker variant, at 1.2 Angstrom resolution (9DOC)
DOI: 10.48577/jpl.clcdih
title: Workshop on Proposal Writing

description: Workshop on Proposal Writing
DOI: 10.15468/dl.hhpdyn
title: Occurrence Download

description: A dataset containing 5555 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hypopachus variolosus (Cope, 1866)"
 ]
}

 The dataset includes 5555 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001089-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qv85jx
title: Occurrence Download

description: A dataset containing 17031 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Rivulidae"
 ]
}

 The dataset includes 17031 records from 262 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001085-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27344847
title: Ch 4 MWS SOB Metagenomes to Align with Nat Comm_LXC_06282023_LT_JG.xlsx

description: During the Mine Wastewater Solutions Project, a process of metagenomic inference was used to predict the presence of sulfur oxidizing pathways (cSOx, iSOx, rDSR, and S4I) in the SOB identified in these mesocosm experiments, via 16S rRNA gene sequencing. The sulfur genes identified in the MAGs are listed here.
DOI: 10.6084/m9.figshare.27344847.v1
title: Ch 4 MWS SOB Metagenomes to Align with Nat Comm_LXC_06282023_LT_JG.xlsx

description: During the Mine Wastewater Solutions Project, a process of metagenomic inference was used to predict the presence of sulfur oxidizing pathways (cSOx, iSOx, rDSR, and S4I) in the SOB identified in these mesocosm experiments, via 16S rRNA gene sequencing. The sulfur genes identified in the MAGs are listed here.
DOI: 10.15468/dl.ryef3e
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-58.60468 -7.80554,-56.48808 -0.7502,-70.44196 4.18853,-72.24499 -5.37537,-58.60468 -7.80554))",
 "OccurrenceStatus is Present",
 "TaxonKey is Corydoras robineae Burgess, 1983"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001090-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3mbmtx
title: Occurrence Download

description: A dataset containing 5436 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Acacia salicina Lindl."
 ]
}

 The dataset includes 5436 records from 102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001091-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12626977
title: Climate change risks illustrated by the IPCC "burning embers": dataset

description: This dataset contains numerical data and descriptive information on all 'burning ember' diagrams presented in the reports of the Intergovernmental Panel on Climate Change (IPCC), from the first appearance of these diagrams in 2001 to the 6th Assessment Report, published in 2022. The aim of this dataset is to bring together the data and metadata needed to reconstruct the burning embers diagrams and acquire essential information on the risks assessed and their evolution, within a single, homogeneous framework. The file presented here has been extracted from the database at the indicated date: it is a versioned archive of the database (excluding internal development fields, which are not publicly available). Analyses and figures based on this dataset are presented in Marbaix et al., 2024 [1], which provides information about the data. The data are provided in a text file in JSON format, the structure of which is described in the file itself and in the Supplement to Marbaix et al. 2024 [1].

The IPCC secretariat has confirmed that these data can be distributed under the CC-BY licence as indicated here. When using this dataset, we ask you to provide the reference to each IPCC report which is the source of the data (and additional sources listed in the references to this dataset when relevant), as well as to the dataset, adding the related paper [1] as soon as it is available.



[1] Marbaix, P., Magnan, A. K., Muccione, V, Thorne, P. W., and Zommers, Z: Climate change risks illustrated by the IPCC "burning embers", submitted.
DOI: 10.6084/m9.figshare.27344220
title: Ch 5 MWS SOB Metagenomes_02012024LT_JG.xlsx

description: During the Mine Wastewater Solutions Project, a process of metagenomic inference was used to predict the presence of sulfur oxidizing pathways (cSOx, iSOx, rDSR, and S4I) in the SOB identified in these mesocosm experiments, via 16S rRNA gene sequencing. The sulfur genes identified in the MAGs which were then used as inoculate for benchtop experiments are listed here.
DOI: 10.6084/m9.figshare.27344220.v1
title: Ch 5 MWS SOB Metagenomes_02012024LT_JG.xlsx

description: During the Mine Wastewater Solutions Project, a process of metagenomic inference was used to predict the presence of sulfur oxidizing pathways (cSOx, iSOx, rDSR, and S4I) in the SOB identified in these mesocosm experiments, via 16S rRNA gene sequencing. The sulfur genes identified in the MAGs which were then used as inoculate for benchtop experiments are listed here.
DOI: 10.15468/dl.n3bqhu
title: Occurrence Download

description: A dataset containing 6887 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thrips tabaci Lindeman, 1889"
 ]
}

 The dataset includes 6887 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001092-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14047937
title: ptychadena_neumanni_spades_01.fasta.gz
DOI: 10.5281/zenodo.14047938
title: ptychadena_neumanni_spades_01.fasta.gz
DOI: 10.5067/lis/isslis/data112
title: Non-Quality Controlled Lightning Imaging Sensor (LIS) on International Space Station (ISS) Science Data Version 2
DOI: 10.15468/dl.r869h8
title: Occurrence Download

description: A dataset containing 1025 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "StateProvince is New York",
 "TaxonKey is Vulpes vulpes (Linnaeus, 1758)",
 "VerbatimScientificName is Vulpes vulpes",
 "Year 2014-2024"
 ]
}

 The dataset includes 1025 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001094-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14047947
title: README Installation Instructions Train and Test Datasets
DOI: 10.5281/zenodo.14047948
title: README Installation Instructions Train and Test Datasets
DOI: 10.5281/zenodo.10892810
title: Supporting information for "Regional benthic δ18O stacks for the "41-kyr world" - an Atlantic-Pacific divergence between 1.8-1.9 Ma"

description: Abstract

Benthic δ18O stacks are the benchmarks by which paleoceanographic data are stratigraphically aligned and compared. However, a recent study found that between 1.8-1.9 million years ago (Ma) several Ceara Rise records differed substantially from the widely used LR04 global stack. Here, we use new Bayesian stacking software to construct regional stacks and demonstrate a geographical divergence in benthic δ18O features from 1.8-1.9 Ma. The pattern of isotopic stage features observed in the Ceara Rise is widespread throughout the Atlantic and differs notably from Pacific records. We propose that this regional difference in isotopic stages may be the result of relatively strong precession forcing and weaker obliquity forcing between 1.8-1.9 Ma. In accordance with the Antiphase Hypothesis, our results highlight a period of apparent sensitivity to regional precession forcing that is masked during most of the 41-kyr world due to the amplitude modulation of obliquity forcing.

In this version, we tested how an update to the BIGMACS code base (https://github.com/eilion/BIGMACS) to V1.1 may or may not impact our results of the GRL paper. We found that the updated code has a negligent impact on the results, as can be seen in the two new figures.
DOI: 10.5281/zenodo.10892811
title: Supporting information for "Regional benthic δ18O stacks for the "41-kyr world" - an Atlantic-Pacific divergence between 1.8-1.9 Ma"

description: Abstract

Benthic δ18O stacks are the benchmarks by which paleoceanographic data are stratigraphically aligned and compared. However, a recent study found that between 1.8-1.9 million years ago (Ma) several Ceara Rise records differed substantially from the widely used LR04 global stack. Here, we use new Bayesian stacking software to construct regional stacks and demonstrate a geographical divergence in benthic δ18O features from 1.8-1.9 Ma. The pattern of isotopic stage features observed in the Ceara Rise is widespread throughout the Atlantic and differs notably from Pacific records. We propose that this regional difference in isotopic stages may be the result of relatively strong precession forcing and weaker obliquity forcing between 1.8-1.9 Ma. In accordance with the Antiphase Hypothesis, our results highlight a period of apparent sensitivity to regional precession forcing that is masked during most of the 41-kyr world due to the amplitude modulation of obliquity forcing.
DOI: 10.5281/zenodo.10896128
title: Supporting information for "Regional benthic δ18O stacks for the "41-kyr world" - an Atlantic-Pacific divergence between 1.8-1.9 Ma"

description: Abstract

Benthic δ18O stacks are the benchmarks by which paleoceanographic data are stratigraphically aligned and compared. However, a recent study found that between 1.8-1.9 million years ago (Ma) several Ceara Rise records differed substantially from the widely used LR04 global stack. Here, we use new Bayesian stacking software to construct regional stacks and demonstrate a geographical divergence in benthic δ18O features from 1.8-1.9 Ma. The pattern of isotopic stage features observed in the Ceara Rise is widespread throughout the Atlantic and differs notably from Pacific records. We propose that this regional difference in isotopic stages may be the result of relatively strong precession forcing and weaker obliquity forcing between 1.8-1.9 Ma. In accordance with the Antiphase Hypothesis, our results highlight a period of apparent sensitivity to regional precession forcing that is masked during most of the 41-kyr world due to the amplitude modulation of obliquity forcing.
DOI: 10.5281/zenodo.14047949
title: Supporting information for "Regional benthic δ18O stacks for the "41-kyr world" - an Atlantic-Pacific divergence between 1.8-1.9 Ma"

description: Abstract

Benthic δ18O stacks are the benchmarks by which paleoceanographic data are stratigraphically aligned and compared. However, a recent study found that between 1.8-1.9 million years ago (Ma) several Ceara Rise records differed substantially from the widely used LR04 global stack. Here, we use new Bayesian stacking software to construct regional stacks and demonstrate a geographical divergence in benthic δ18O features from 1.8-1.9 Ma. The pattern of isotopic stage features observed in the Ceara Rise is widespread throughout the Atlantic and differs notably from Pacific records. We propose that this regional difference in isotopic stages may be the result of relatively strong precession forcing and weaker obliquity forcing between 1.8-1.9 Ma. In accordance with the Antiphase Hypothesis, our results highlight a period of apparent sensitivity to regional precession forcing that is masked during most of the 41-kyr world due to the amplitude modulation of obliquity forcing.

In this version, we tested how an update to the BIGMACS code base (https://github.com/eilion/BIGMACS) to V1.1 may or may not impact our results of the GRL paper. We found that the updated code has a negligent impact on the results, as can be seen in the two new figures.
DOI: 10.6084/m9.figshare.27344832
title: Ch 3 MWS SOB Metagenomes_LXC_05012020_JG.xlsx

description: During the Mine Wastewater Solutions Project, a process of metagenomic inference was used to predict the presence of sulfur oxidizing pathways (cSOx, iSOx, rDSR, and S4I) in the SOB identified in these mesocosm experiments, via 16S rRNA gene sequencing. The sulfur genes identified in the MAGs are listed here.
DOI: 10.6084/m9.figshare.27344832.v1
title: Ch 3 MWS SOB Metagenomes_LXC_05012020_JG.xlsx

description: During the Mine Wastewater Solutions Project, a process of metagenomic inference was used to predict the presence of sulfur oxidizing pathways (cSOx, iSOx, rDSR, and S4I) in the SOB identified in these mesocosm experiments, via 16S rRNA gene sequencing. The sulfur genes identified in the MAGs are listed here.
DOI: 10.6084/m9.figshare.27344832.v2
title: Ch 3 MWS SOB Metagenomes_LXC_05012020_JG.xlsx

description: During the Mine Wastewater Solutions Project, a process of metagenomic inference was used to predict the presence of sulfur oxidizing pathways (cSOx, iSOx, rDSR, and S4I) in the SOB identified in these mesocosm experiments, via 16S rRNA gene sequencing. The sulfur genes identified in the MAGs are listed here.
DOI: 10.15468/dl.fajn7x
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Notarius rugispinis (Valenciennes, 1840)"
 ]
}

 The dataset includes 21 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001095-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pss52t
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "TaxonKey is one of (Araptus W.J.Eichhoff, 1872)"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001096-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xjnskk
title: Occurrence Download

description: A dataset containing 1778 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "TaxonKey is Helicoverpa armigera (Hübner, 1808)"
 ]
}

 The dataset includes 1778 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001097-241106120511685/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6hceg8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potamogeton iriomotensis Masam."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006001-241107131044228/datasets/export for details.
DOI: 10.5281/zenodo.14063090
title: ptychadena_anchietae_spades_01.fasta.gz
DOI: 10.5281/zenodo.14063091
title: ptychadena_anchietae_spades_01.fasta.gz
DOI: 10.6084/m9.figshare.27643671.v3
title: Replication Package

description: This package contains feature feedback survey question/answers, post demo survey question/answers, focus group session outline, and open coding codes used in "Enhanced Code Reviews Using Pull Request Based Change Impact Analysis"
DOI: 10.15468/dl.djnv6y
title: Occurrence Download

description: A dataset containing 4527 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Panthera tigris (Linnaeus, 1758)"
 ]
}

 The dataset includes 4527 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006003-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8pxuxg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potamogeton iriomotensis Masam."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006004-241107131044228/datasets/export for details.
DOI: 10.6084/m9.figshare.27643428
title: Raw_Material_C_Arvensis.xlsx

description: This database contains the raw data for the study ''Formulation of a biological sunscreen from <i>Calendula arvensis</i> capitula extracts: Antioxidant, anti-ageing, surface tension and UVB protection properties assessed''. The data include results obtained for extraction method yields and biological activities, including phenolic compound content, antioxidant activity and enzyme inhibition. Triplicate results for each test along with calculation of their average and standard deviation.
DOI: 10.6084/m9.figshare.27643716
title: Sequencing of gut microbiota<b> </b>and metabolomic data

description: intestinal microbiome composition processed using 16S rDNA sequencing; serum metabolites were detected using UHPLC-OE-MS non-target metabolomics technology
DOI: 10.15468/dl.zv7x8j
title: Occurrence Download

description: A dataset containing 118385 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oryctolagus cuniculus (Linnaeus, 1758)",
 "Country is Australia",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 118385 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005999-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gqum3e
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potamogeton iriomotensis Masam."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006005-241107131044228/datasets/export for details.
DOI: 10.15468/dl.2z9acr
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potamogeton sumatranus Miq."
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006006-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tbm4j2
title: Occurrence Download

description: A dataset listing the 9 species recorded in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Panthera tigris (Linnaeus, 1758)"
 ]
}

 The dataset's 9 records were derived from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006002-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7zxff9
title: Occurrence Download

description: A dataset containing 5929 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aegiceras Gaertn."
 ]
}

 The dataset includes 5929 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006007-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t32ueb
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Bolivia (Plurinational State of)",
 "TaxonKey is Aedes aegypti (Linnaeus, 1762)",
 "Year 2000-2024"
 ]
}

 The dataset includes 28 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006009-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13561536
title: Surface precipitation type based on new decision algorithm about 131 precipitation events in 5 ICE-POP 2018 sites

description: Decision results of winter precipitation type about 131 precipitation events in 5 ICE-POP 2018 sites

RA: Rain

RASN: Rain and snow

SN: Snow
DOI: 10.5281/zenodo.13561535
title: Surface precipitation type based on new decision algorithm about 131 precipitation events in 5 ICE-POP 2018 sites

description: The documents are decision results (+simple event description) of surface precipitation type based on new decision algorithm about 131 precipitation events in 5 ICE-POP 2018 sites.

Simple event description include PARSIVEL V-D scatterplots and rawinsonde profiles.

Please see Description_plot.pdf.

and other pdf files show figures relating events belong to each types (RA[Rain], SN[Snow], RASN).
DOI: 10.5281/zenodo.14063087
title: Surface precipitation type based on new decision algorithm about 131 precipitation events in 5 ICE-POP 2018 sites

description: The documents are decision results (+simple event description) of surface precipitation type based on new decision algorithm about 131 precipitation events in 5 ICE-POP 2018 sites.

Simple event description include PARSIVEL V-D scatterplots and rawinsonde profiles.

Please see Description_plot.pdf.

and other pdf files show figures relating events belong to each types (RA[Rain], SN[Snow], RASN).
DOI: 10.15468/dl.us8ebt
title: Occurrence Download

description: A dataset containing 4928450 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((95 -11,141 -11,141 6,95 6,95 -11))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 4928450 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006008-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bw37xu
title: Occurrence Download

description: A dataset containing 7215 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Tabebuia rosea (Bertol.) Bertero ex A.DC."
 ]
}

 The dataset includes 7215 records from 119 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006011-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.