cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.st61k
title: Data from: Detection dog efficacy for collecting fecal samples from the critically endangered Cross River gorilla (Gorilla gorilla diehli) for genetic censusing

description: Population estimates using genetic capture–recapture methods from
 non-invasively collected wildlife samples are more accurate and precise
 than those obtained from traditional methods when detection and resampling
 rates are high. Recently, detection dogs have been increasingly used to
 find elusive species and their by-products. Here we compared the
 effectiveness of dog- and human-directed searches for Cross River gorilla
 (Gorilla gorilla diehli) faeces at two sites. The critically endangered
 Cross River gorilla inhabits a region of high biodiversity and endemism on
 the border between Nigeria and Cameroon. The rugged highland terrain and
 their cryptic behaviour make them difficult to study and a precise
 population size for the subspecies is still lacking. Dog-directed surveys
 located more fresh faeces with less bias than human-directed survey teams.
 This produced a more reliable population estimate, although of modest
 precision given the small scale of this pilot study. Unfortunately, the
 considerable costs associated with use of the United States-based
 detection dog teams make the use of these teams financially unfeasible for
 a larger, more comprehensive survey. To realize the full potential of
 dog-directed surveys and increase cost-effectiveness, we recommend basing
 dog-detection teams in the countries where they will operate and expanding
 the targets the dogs are trained to detect.
description: Cross River Gorilla
 Microsateliite GenotypesCross River gorilla
 consenus microsateliite genotypes: see ReadMe fileArandjelovicetal2015_CRGorillaMsatGenotypes_RSOS_Dryad.csv
DOI: 10.5061/dryad.bp685
title: Data from: Developmental biology of the early Cambrian cnidarian Olivooides

description: Fossilized embryos afford direct insight into the pattern of development
 in extinct organisms, providing unique tests of hypotheses of
 developmental evolution based in comparative embryology. However, these
 fossils can only be effective in this role if their embryology and
 phylogenetic affinities are well constrained. We elucidate and interpret
 the development of Olivooides from embryonic and adult stages and use
 these data to discriminate among competing interpretations of their
 anatomy and affinity. The embryology of Olivooides is principally
 characterized by the development of an ornamented periderm that initially
 forms externally and is subsequently formed internally, released at the
 aperture, facilitating the direct development of the embryo into an adult
 theca. Internal anatomy is known only from embryonic stages, revealing two
 internal tissue layers, the innermost of which is developed into three
 transversally arranged walls that partly divide the lumen into an
 abapertural region, interpreted as the gut of a polyp, and an adapertural
 region that includes structures that resemble the peridermal teeth of
 coronate scyphozoans. The anatomy and pattern of development exhibited by
 Olivooides appears common to the other known genus of olivooid,
 Quadrapyrgites, which differs in its tetraradial, as opposed to
 pentaradial symmetry. We reject previous interpretations of the olivooids
 as cycloneuralians, principally on the grounds that they lack a through
 gut and introvert, in embryo and adult. Instead we consider the affinities
 of the olivooids among medusozoan cnidarians; our phylogenetic analysis
 supports their classification as total-group Coronata, within
 crown-Scyphozoa. Olivooides and Quadrapyrgites evidence a broader range of
 life history strategies and bodyplan symmetry than is otherwise commonly
 represented in extant Scyphozoa specifically, and Cnidaria more generally.
description: Data
 matrixPhylogenetic data
 matrixOlivooides_mtx.nex
DOI: 10.5061/dryad.33j1g
title: Data from: On the limits of interpreting some plastic responses through a cooperator/cheater prism. A comment on Harrison

description: Micro-organisms are known to exhibit phenotypic plasticity in response to
 changes in their environment. Recent studies have shown that a parasite
 strain can adjust its host exploitation strategies to the presence of
 unrelated strains, e.g. for Plasmodium chabaudi by adjusting its
 sex-ratio. J. Evol. Biol. 2013; 26: 1370–1378 claims to report a similar
 plastic response to the presence of unrelated strains in the case of
 siderophore-producing bacteria. I argue that she does not provide
 sufficient evidence to support the interpretation of the plastic response
 she observes (increasing siderophore production in the presence of
 cheaters) through a cooperator/cheater framework. I show that known
 plastic responses to physicochemical factors, such as siderophore or iron
 concentration, seem to offer a clearer and more parsimonious explanation.
 Finally, I also challenge the parallel she makes between the process she
 observes in siderophore-producing bacteria and compensation in bi-parental
 care models.
description: data_for_DryadThe zip file contains an R script to run the statistical analyses and plot the Figure shown in the manuscript. It also contains the data from the original article, presented here in a format appropriate for use with the script. The data from the original article are archived as: Harrison F (2013) Data from: Dynamic social behaviour in a bacterium: Pseudomonas aeruginosa partially compensates for siderophore loss to cheats. Dryad Digital Repository. http://dx.doi.org/10.5061/dryad.t77nc
DOI: 10.5061/dryad.t7142b79
title: Data from: Hidden diversity in diatoms of Kenyan Lake Naivasha: a genetic approach detects temporal variation

description: This study provides insights into the morphological and genetic diversity
 in diatoms occurring in core sediments from tropical lakes in Kenya. We
 developed a genetic survey technique specific for diatoms utilizing a
 short region (76-67 bp) of the ribulose-1,5-bisphosphate
 carboxylase/oxygenase large subunit (rbcL) gene as genetic barcode. Our
 analyses (i) validated the use of rbcL as a barcoding marker for diatoms,
 applied to sediment samples, (ii) showed a significant correlation between
 the results obtained by morphological and molecular data and (iii)
 indicated temporal variation in diatom assemblages on the inter- and
 intra-specific level. Diatom assemblages from a short core from Lake
 Naivasha show a drastic shift over the last 200 years, as littoral species
 (e.g. Navicula) are replaced by more planktonic ones (e.g. Aulacoseira).
 Within that same period, we detected periodic changes in the respective
 frequencies of distinct haplotype groups of Navicula, which coincide with
 wet and dry periods of Lake Naivasha between 1820 and 1938 AD. Our genetic
 analyses on historical lake sediments revealed inter- and intra-specific
 variation in diatoms, which is partially hidden behind single morphotypes.
 The occurrence of particular genetic lineages is probably correlated to
 environmental factors.
description: DNA_sequences_28_Haplotypes_Lake NaivsahaAlignment of 28 haplotypes. Fasta file was created in BioEdit.
DOI: 10.17182/hepdata.166010.v1/t1
title: "Figure 4a" of "Search for the pair production of long-lived supersymmetric partners of the tau lepton in proton-proton collisions at $\sqrt{s}$ = 13 TeV"

description: Distributions of $p_\text{T, j2}$ for data and the predicted background, in the signal region. The signal distributions expected in the maximally mixed scenario for a few representative sets of $(m_{\tilde{\tau}} [\text{GeV}], c\tau_{0} [\text{mm}])$ values are overlaid: (100, 10), (100, 50), (100, 100), (200, 10), (200, 50), (200, 100), (300, 10), (300, 50), and (300, 100). In bins where the observed yield is zero, the Garwood interval at 68% CL is shown as a positive uncertainty. The last bin includes the overflow.
description: Gauge-mediated supersymmetry-breaking models provide a strong motivation to search for a supersymmetric partner of the tau lepton (stau) with a macroscopic lifetime. Long-lived stau decays produce tau leptons that are displaced from the primary proton-proton interaction vertex, leading to an unconventional signature. This paper presents a search for the direct production of long-lived staus decaying within the CMS tracker volume in proton-proton collisions at $\sqrt{s}=13$ TeV, performed for the first time with an identification algorithm based on a graph neural network dedicated to displaced tau leptons. The data sample, corresponding to an integrated luminosity of 138\fbinv, was recorded with the CMS experiment at the CERN LHC between 2016 and 2018. This search excludes, at 95% confidence level, stau masses, $m_{\tilde{\tau}}$, in the 126--260 (90--425) GeV range for a proper decay length of 50 mm in the maximally mixed (mass-degenerate) scenario, while for $m_{\tilde{\tau}} = 200$ GeV, stau proper decay lengths are excluded in the range 21--94 (6--333) mm. These results improve the exclusion limits compared to previous searches, and extend the parameter space explored in the context of supersymmetry.
DOI: 10.17182/hepdata.166010.v1/t2
title: "Figure 4b" of "Search for the pair production of long-lived supersymmetric partners of the tau lepton in proton-proton collisions at $\sqrt{s}$ = 13 TeV"

description: Distributions of $p^\text{miss}_\text{T}$ for data and the predicted background, in the signal region. The signal distributions expected in the maximally mixed scenario for a few representative sets of $(m_{\tilde{\tau}} [\text{GeV}], c\tau_{0} [\text{mm}])$ values are overlaid: (100, 10), (100, 50), (100, 100), (200, 10), (200, 50), (200, 100), (300, 10), (300, 50), and (300, 100). In bins where the observed yield is zero, the Garwood interval at 68% CL is shown as a positive uncertainty. The last bin includes the overflow.
description: Gauge-mediated supersymmetry-breaking models provide a strong motivation to search for a supersymmetric partner of the tau lepton (stau) with a macroscopic lifetime. Long-lived stau decays produce tau leptons that are displaced from the primary proton-proton interaction vertex, leading to an unconventional signature. This paper presents a search for the direct production of long-lived staus decaying within the CMS tracker volume in proton-proton collisions at $\sqrt{s}=13$ TeV, performed for the first time with an identification algorithm based on a graph neural network dedicated to displaced tau leptons. The data sample, corresponding to an integrated luminosity of 138\fbinv, was recorded with the CMS experiment at the CERN LHC between 2016 and 2018. This search excludes, at 95% confidence level, stau masses, $m_{\tilde{\tau}}$, in the 126--260 (90--425) GeV range for a proper decay length of 50 mm in the maximally mixed (mass-degenerate) scenario, while for $m_{\tilde{\tau}} = 200$ GeV, stau proper decay lengths are excluded in the range 21--94 (6--333) mm. These results improve the exclusion limits compared to previous searches, and extend the parameter space explored in the context of supersymmetry.
DOI: 10.17182/hepdata.166010.v1/t3
title: "Figure 4c" of "Search for the pair production of long-lived supersymmetric partners of the tau lepton in proton-proton collisions at $\sqrt{s}$ = 13 TeV"

description: Distributions of $m_\text{T2}$ for data and the predicted background, in the signal region. The signal distributions expected in the maximally mixed scenario for a few representative sets of $(m_{\tilde{\tau}} [\text{GeV}], c\tau_{0} [\text{mm}])$ values are overlaid: (100, 10), (100, 50), (100, 100), (200, 10), (200, 50), (200, 100), (300, 10), (300, 50), and (300, 100). In bins where the observed yield is zero, the Garwood interval at 68% CL is shown as a positive uncertainty. The last bin includes the overflow.
description: Gauge-mediated supersymmetry-breaking models provide a strong motivation to search for a supersymmetric partner of the tau lepton (stau) with a macroscopic lifetime. Long-lived stau decays produce tau leptons that are displaced from the primary proton-proton interaction vertex, leading to an unconventional signature. This paper presents a search for the direct production of long-lived staus decaying within the CMS tracker volume in proton-proton collisions at $\sqrt{s}=13$ TeV, performed for the first time with an identification algorithm based on a graph neural network dedicated to displaced tau leptons. The data sample, corresponding to an integrated luminosity of 138\fbinv, was recorded with the CMS experiment at the CERN LHC between 2016 and 2018. This search excludes, at 95% confidence level, stau masses, $m_{\tilde{\tau}}$, in the 126--260 (90--425) GeV range for a proper decay length of 50 mm in the maximally mixed (mass-degenerate) scenario, while for $m_{\tilde{\tau}} = 200$ GeV, stau proper decay lengths are excluded in the range 21--94 (6--333) mm. These results improve the exclusion limits compared to previous searches, and extend the parameter space explored in the context of supersymmetry.
DOI: 10.17182/hepdata.166010.v1/t5
title: "Figure 6a (prefit yields)" of "Search for the pair production of long-lived supersymmetric partners of the tau lepton in proton-proton collisions at $\sqrt{s}$ = 13 TeV"

description: The observed and predicted event yields in the eight SR bins as defined in Table 2. The signal yields expected in the maximally mixed scenario for a few representative sets of $(m_{\tilde{\tau}} [\text{GeV}], c\tau_{0} [\text{mm}])$ values are overlaid: (100, 10), (100, 50), (100, 100), (200, 10), (200, 50), (200, 100), (300, 10), (300, 50), and (300, 100). In bins where the observed yield is zero, the Garwood interval at 68% CL is shown as a positive uncertainty. The predicted yields and uncertainties are before the maximum likelihood fit to data under the background-only hypothesis, as described in Section 8.
description: Gauge-mediated supersymmetry-breaking models provide a strong motivation to search for a supersymmetric partner of the tau lepton (stau) with a macroscopic lifetime. Long-lived stau decays produce tau leptons that are displaced from the primary proton-proton interaction vertex, leading to an unconventional signature. This paper presents a search for the direct production of long-lived staus decaying within the CMS tracker volume in proton-proton collisions at $\sqrt{s}=13$ TeV, performed for the first time with an identification algorithm based on a graph neural network dedicated to displaced tau leptons. The data sample, corresponding to an integrated luminosity of 138\fbinv, was recorded with the CMS experiment at the CERN LHC between 2016 and 2018. This search excludes, at 95% confidence level, stau masses, $m_{\tilde{\tau}}$, in the 126--260 (90--425) GeV range for a proper decay length of 50 mm in the maximally mixed (mass-degenerate) scenario, while for $m_{\tilde{\tau}} = 200$ GeV, stau proper decay lengths are excluded in the range 21--94 (6--333) mm. These results improve the exclusion limits compared to previous searches, and extend the parameter space explored in the context of supersymmetry.
DOI: 10.17182/hepdata.166010.v1/t7
title: "Figure 7a (observed limits, maximally mixed)" of "Search for the pair production of long-lived supersymmetric partners of the tau lepton in proton-proton collisions at $\sqrt{s}$ = 13 TeV"

description: The observed upper limits in the $(m_{\tilde{\tau}} [\text{GeV}], c\tau_{0} [\text{mm}])$ plane, for the maximally mixed scenario.
description: Gauge-mediated supersymmetry-breaking models provide a strong motivation to search for a supersymmetric partner of the tau lepton (stau) with a macroscopic lifetime. Long-lived stau decays produce tau leptons that are displaced from the primary proton-proton interaction vertex, leading to an unconventional signature. This paper presents a search for the direct production of long-lived staus decaying within the CMS tracker volume in proton-proton collisions at $\sqrt{s}=13$ TeV, performed for the first time with an identification algorithm based on a graph neural network dedicated to displaced tau leptons. The data sample, corresponding to an integrated luminosity of 138\fbinv, was recorded with the CMS experiment at the CERN LHC between 2016 and 2018. This search excludes, at 95% confidence level, stau masses, $m_{\tilde{\tau}}$, in the 126--260 (90--425) GeV range for a proper decay length of 50 mm in the maximally mixed (mass-degenerate) scenario, while for $m_{\tilde{\tau}} = 200$ GeV, stau proper decay lengths are excluded in the range 21--94 (6--333) mm. These results improve the exclusion limits compared to previous searches, and extend the parameter space explored in the context of supersymmetry.
DOI: 10.17182/hepdata.166010.v1/t9
title: "Figure 7a (observed$+1\sigma$ exclusion, maximally mixed)" of "Search for the pair production of long-lived supersymmetric partners of the tau lepton in proton-proton collisions at $\sqrt{s}$ = 13 TeV"

description: The set of $(m_{\tilde{\tau}} [\text{GeV}], c\tau_{0} [\text{mm}])$ points lying on the observed$+1\sigma$ exclusion contour, for the maximally mixed scenario.
description: Gauge-mediated supersymmetry-breaking models provide a strong motivation to search for a supersymmetric partner of the tau lepton (stau) with a macroscopic lifetime. Long-lived stau decays produce tau leptons that are displaced from the primary proton-proton interaction vertex, leading to an unconventional signature. This paper presents a search for the direct production of long-lived staus decaying within the CMS tracker volume in proton-proton collisions at $\sqrt{s}=13$ TeV, performed for the first time with an identification algorithm based on a graph neural network dedicated to displaced tau leptons. The data sample, corresponding to an integrated luminosity of 138\fbinv, was recorded with the CMS experiment at the CERN LHC between 2016 and 2018. This search excludes, at 95% confidence level, stau masses, $m_{\tilde{\tau}}$, in the 126--260 (90--425) GeV range for a proper decay length of 50 mm in the maximally mixed (mass-degenerate) scenario, while for $m_{\tilde{\tau}} = 200$ GeV, stau proper decay lengths are excluded in the range 21--94 (6--333) mm. These results improve the exclusion limits compared to previous searches, and extend the parameter space explored in the context of supersymmetry.
DOI: 10.5061/dryad.v3p2g
title: Data from: Sexual selection constrains the body mass of male but not female mice

description: Sexual size dimorphism results when female and male body size is
 influenced differently by natural and sexual selection. Typically, in
 polygynous species larger male body size is thought to be favored in
 competition for mates and constraints on maximal body size are due to
 countervailing natural selection on either sex; however, it has been
 postulated that sexual selection itself may result in stabilizing
 selection at an optimal mass. Here we test this hypothesis by
 retrospectively assessing the influence of body mass, one metric of body
 size, on the fitness of 113 wild-derived house mice (Mus musculus)
 residing within ten replicate semi-natural enclosures from previous
 studies conducted by our laboratory. Enclosures possess similar levels of
 sexual selection, but relaxed natural selection, relative to natural
 systems. Heavier females produced more offspring, while males of
 intermediate mass had the highest fitness. Female results suggest that
 some aspect of natural selection, absent from enclosures, acts to decrease
 their body mass, while the upper and lower boundaries of male mass are
 constrained by sexual selection.
description: Body mass and offspring
 countsBody mass and
 reproductive success (offspring counts) of 113 house mice living in
 semi-natural enclosures. Designation of replicate population (n = 10),
 initial study (n = 3), and litter identifiers are provided. Each row
 represents an individual mouse.Body_mass_and_offspring_counts.csv
DOI: 10.17182/hepdata.166010.v1/t4
title: "Figure 5" of "Search for the pair production of long-lived supersymmetric partners of the tau lepton in proton-proton collisions at $\sqrt{s}$ = 13 TeV"

description: The observed and predicted event yields in the eight BRT1 bins, as defined in Table 2. The signal yields expected in the maximally mixed scenario for a few representative sets of $(m_{\tilde{\tau}} [\text{GeV}], c\tau_{0} [\text{mm}])$ values are overlaid: (100, 50), (100, 100), (200, 50), and (200, 100).
description: Gauge-mediated supersymmetry-breaking models provide a strong motivation to search for a supersymmetric partner of the tau lepton (stau) with a macroscopic lifetime. Long-lived stau decays produce tau leptons that are displaced from the primary proton-proton interaction vertex, leading to an unconventional signature. This paper presents a search for the direct production of long-lived staus decaying within the CMS tracker volume in proton-proton collisions at $\sqrt{s}=13$ TeV, performed for the first time with an identification algorithm based on a graph neural network dedicated to displaced tau leptons. The data sample, corresponding to an integrated luminosity of 138\fbinv, was recorded with the CMS experiment at the CERN LHC between 2016 and 2018. This search excludes, at 95% confidence level, stau masses, $m_{\tilde{\tau}}$, in the 126--260 (90--425) GeV range for a proper decay length of 50 mm in the maximally mixed (mass-degenerate) scenario, while for $m_{\tilde{\tau}} = 200$ GeV, stau proper decay lengths are excluded in the range 21--94 (6--333) mm. These results improve the exclusion limits compared to previous searches, and extend the parameter space explored in the context of supersymmetry.
DOI: 10.17182/hepdata.166010.v1/t6
title: "Figure 6b (postfit yields)" of "Search for the pair production of long-lived supersymmetric partners of the tau lepton in proton-proton collisions at $\sqrt{s}$ = 13 TeV"

description: The observed and predicted event yields in the eight SR bins as defined in Table 2. The signal yields expected in the maximally mixed scenario for a few representative sets of $(m_{\tilde{\tau}} [\text{GeV}], c\tau_{0} [\text{mm}])$ values are overlaid: (100, 10), (100, 50), (100, 100), (200, 10), (200, 50), (200, 100), (300, 10), (300, 50), and (300, 100). In bins where the observed yield is zero, the Garwood interval at 68% CL is shown as a positive uncertainty. The predicted yields and uncertainties are after the maximum likelihood fit to data under the background-only hypothesis, as described in Section 8.
description: Gauge-mediated supersymmetry-breaking models provide a strong motivation to search for a supersymmetric partner of the tau lepton (stau) with a macroscopic lifetime. Long-lived stau decays produce tau leptons that are displaced from the primary proton-proton interaction vertex, leading to an unconventional signature. This paper presents a search for the direct production of long-lived staus decaying within the CMS tracker volume in proton-proton collisions at $\sqrt{s}=13$ TeV, performed for the first time with an identification algorithm based on a graph neural network dedicated to displaced tau leptons. The data sample, corresponding to an integrated luminosity of 138\fbinv, was recorded with the CMS experiment at the CERN LHC between 2016 and 2018. This search excludes, at 95% confidence level, stau masses, $m_{\tilde{\tau}}$, in the 126--260 (90--425) GeV range for a proper decay length of 50 mm in the maximally mixed (mass-degenerate) scenario, while for $m_{\tilde{\tau}} = 200$ GeV, stau proper decay lengths are excluded in the range 21--94 (6--333) mm. These results improve the exclusion limits compared to previous searches, and extend the parameter space explored in the context of supersymmetry.