cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.c8thrx
title: Occurrence Download

description: A dataset containing 9978 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "Continent is one of (Africa, Asia, Oceania, Europe, North America, South America, Antarctica)",
 "DatasetKey is Macro-moth distribution records for the UK from Butterfly Conservation, up to 2019",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "Issue is one of (Coordinate rounded, Country derived from coordinates, Continent derived from coordinates)",
 "License is CC-BY-NC 4.0",
 "Month is one of (April, May, June, July, August, September, October, March, February, January, November, December)",
 "TaxonKey is Helicoverpa armigera",
 "Year is greater than or equal to 1000"
 ]
}

 The dataset includes 9978 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009725-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/zqe-9h2-s5h
title: Rumex aquaticus L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.15468/dl.tm9qtz
title: Occurrence Download

description: A dataset containing 1000 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oreochromis mossambicus",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1000 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009728-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aa3ndb
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ADW5475"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009726-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16123137
title: Structure of a Transient Protein Folding Intermediate by Pressure-Jump NMR

description: Data figures; Bruker format pulse sequence code and parameters; and csRosetta input files for the paper titled “Structure of a Transient Protein Folding Intermediate by Pressure-Jump NMR” . The csRosetta folder includes the command lines, input files, and all restraints used for structure calculations. The NOE and RDC folders contain additional data strips corresponding to Figures S5 and S6 of the paper, respectively. Pulse sequence code and parameters for the NOESY and ARTSY pressure-jump NMR measurements are available in the pulse_sequence folder.
DOI: 10.5281/zenodo.16125212
title: Structure of a Transient Protein Folding Intermediate by Pressure-Jump NMR

description: Data figures; Bruker format pulse sequence code and parameters; and csRosetta input files for the paper titled “Structure of a Transient Protein Folding Intermediate by Pressure-Jump NMR” . The csRosetta folder includes the command lines, input files, and all restraints used for structure calculations. The NOE and RDC folders contain additional data strips corresponding to Figures S5 and S6 of the paper, respectively. Pulse sequence code and parameters for the NOESY and ARTSY pressure-jump NMR measurements are available in the pulse_sequence folder.
DOI: 10.15468/dl.4b96sy
title: Occurrence Download

description: A dataset containing 2895695 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "Country is Italy",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2895695 records from 364 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009693-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7pen32
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amaranthus hybridus",
 "Country is Slovakia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009729-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ucwu7e
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oreochromis mossambicus",
 "Country is Myanmar",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009730-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/y8p-678-hd9
title: Rumex L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.15468/dl.5c4phf
title: Occurrence Download

description: A dataset containing 360 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pitcairnia nigra"
 ]
}

 The dataset includes 360 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009731-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uq3gjd
title: Occurrence Download

description: A dataset containing 193 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Descurainia stricta"
 ]
}

 The dataset includes 193 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009732-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a53mrx
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Isatis takhtajanii"
 ]
}

 The dataset includes 53 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009733-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/whgyprw3fw
title: Plasma and liver metabolome modifications in mice undergoing anorexia treatment

description: Total liver and plasma extracts from adult female mice (8-week-old) subjected to CRS (chronic restraint stress) or CDDP (cisplatin) induced anorexia with or without RUSH-ACBP/DBI delivery.
DOI: 10.15468/dl.z35n4u
title: Occurrence Download

description: A dataset containing 1740 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sambucus adnata"
 ]
}

 The dataset includes 1740 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009734-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/whgyprw3fw.1
title: Plasma and liver metabolome modifications in mice undergoing anorexia treatment

description: Total liver and plasma extracts from adult female mice (8-week-old) subjected to CRS (chronic restraint stress) or CDDP (cisplatin) induced anorexia with or without RUSH-ACBP/DBI delivery.
DOI: 10.17632/rpwjvh9vwv
title: A Study on the Airline Pilots' Cognition of "The Five Hazardous Attitudes"

description: To study the cognition of airline pilots with different demographic information about five hazardous attitudes, and analyze the influence of flight fatigue on hazardous attitudes.
DOI: 10.17632/rpwjvh9vwv.1
title: A Study on the Airline Pilots' Cognition of "The Five Hazardous Attitudes"

description: To study the cognition of airline pilots with different demographic information about five hazardous attitudes, and analyze the influence of flight fatigue on hazardous attitudes.
DOI: 10.17632/6vd56vw3zd
title: Figures Data for "Development and Internal Validation of a Novel Pre-Transplant Biomarker Panel to Predict Post-Transplant Mortality in Liver Transplant Recipients"

description: Figures Data regarding the development and internal validation of the Liver Immune Frailty Index. This study seeks to identify biomarkers of pre-liver transplant (LT) immune dysfunction that predict early mortality following LT. Plasma biomarkers and clinical variables were assessed 279 waitlisted patients immediately prior to LT (T0). HCV IgG, Fractalkine, and MMP3 were multivariate predictors of 1-year mortality. These were utilized to create the Liver Immune Frailty Index (LIFI), which stratifies recipients into -low, -moderate, and –high risk tertiles of early post-LT mortality. One-year mortality was 1.4%, 12.7%, and 58.3% for LIFI-low, -moderate, and -high, respectively. Internal validation demonstrates LIFI predicts early post-LT mortality (C-statistic=0.84, Brier score=0.04). Stratification into LIFI-high or moderate requires cumulative contribution of elevated MMP3 and Fractalkine levels and is not dependent on HCV status. Excluding HCV IgG+ as a covariate similarly stratifies patients at high-, moderate-, and low-risk of early post-LT mortality (LIFIMF, C-statistic 0.83). LIFI may identify patients at risk for persistent severe immune dysfunction and early mortality post-LT.
DOI: 10.17632/6vd56vw3zd.1
title: Figures Data for "Development and Internal Validation of a Novel Pre-Transplant Biomarker Panel to Predict Post-Transplant Mortality in Liver Transplant Recipients"

description: Figures Data regarding the development and internal validation of the Liver Immune Frailty Index. This study seeks to identify biomarkers of pre-liver transplant (LT) immune dysfunction that predict early mortality following LT. Plasma biomarkers and clinical variables were assessed 279 waitlisted patients immediately prior to LT (T0). HCV IgG, Fractalkine, and MMP3 were multivariate predictors of 1-year mortality. These were utilized to create the Liver Immune Frailty Index (LIFI), which stratifies recipients into -low, -moderate, and –high risk tertiles of early post-LT mortality. One-year mortality was 1.4%, 12.7%, and 58.3% for LIFI-low, -moderate, and -high, respectively. Internal validation demonstrates LIFI predicts early post-LT mortality (C-statistic=0.84, Brier score=0.04). Stratification into LIFI-high or moderate requires cumulative contribution of elevated MMP3 and Fractalkine levels and is not dependent on HCV status. Excluding HCV IgG+ as a covariate similarly stratifies patients at high-, moderate-, and low-risk of early post-LT mortality (LIFIMF, C-statistic 0.83). LIFI may identify patients at risk for persistent severe immune dysfunction and early mortality post-LT.
DOI: 10.17632/67wdfyh4xg
title: Transferability of the Anisotropy in the ReS2/WSe2 Heterostructure

description: PL, Raman data for "Transferability of the Anisotropy in the ReS2/WSe2 Heterostructure"
DOI: 10.3535/4ws-rqx-0n1
title: Rumex alpinus L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.17632/67wdfyh4xg.1
title: Transferability of the Anisotropy in the ReS2/WSe2 Heterostructure

description: PL, Raman data for "Transferability of the Anisotropy in the ReS2/WSe2 Heterostructure"
DOI: 10.3535/47g-ykd-mdb
title: Rumex alpinus L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.17632/bc2wjyh7hy
title: Resource competition affects the developmental outcome of the acoustic parasitoid fly Ormia ochracea

description: The following are data files required to generate figures in Dominguez et al. (2025) published in Annals of the Entomological Society of America. In this study, we investigate the effects of resource competition on the developmental outcomes of the the acoustic parasitoid fly Ormia ochracea. Our results demonstrate that increasing fly larval competition with a host cricket reduces both pupation and eclosion success and produces significantly smaller fly pupae. Pupal width strongly predicts adult fly size, suggesting that the effects of larval competition carry forward into adulthood—even after direct competition has ended. These findings support the hypothesis that early nutritional constraints shape downstream fitness-related traits in the acoustic parasitoid fly Ormia ochracea. See Dominguez et al. (2025) for details on data collection and analyses.
R markdown file with detailed data analysis code and associated data files included in this repository.
DOI: 10.17632/bc2wjyh7hy.1
title: Resource competition affects the developmental outcome of the acoustic parasitoid fly Ormia ochracea

description: The following are data files required to generate figures in Dominguez et al. (2025) published in Annals of the Entomological Society of America. In this study, we investigate the effects of resource competition on the developmental outcomes of the the acoustic parasitoid fly Ormia ochracea. Our results demonstrate that increasing fly larval competition with a host cricket reduces both pupation and eclosion success and produces significantly smaller fly pupae. Pupal width strongly predicts adult fly size, suggesting that the effects of larval competition carry forward into adulthood—even after direct competition has ended. These findings support the hypothesis that early nutritional constraints shape downstream fitness-related traits in the acoustic parasitoid fly Ormia ochracea. See Dominguez et al. (2025) for details on data collection and analyses.
R markdown file with detailed data analysis code and associated data files included in this repository.
DOI: 10.17632/gmgxzphgrc
title: Structural mechanism of H3K27 demethylation and crosstalk with heterochromatin markers - Lin et al

description: Data S1. Data files, related to Figure 2.
(A-F) Uncropped electrophoretic mobility shift assay (EMSA) gels showing nucleosome binding by KDM6B.
(G-H) Uncropped western blot images of nucleosome demethylation assays.
Data S2. Data files, related to Figures 3, 4 and 5.
(A-J) Uncropped EMSA gels showing nucleosome binding by KDM6B and its mutants.
(K-L) Uncropped western blot images of nucleosome demethylation assays performed with KDM6B and its mutants.
Data S3. Data files, related to Figure 6.
(A-D) Uncropped western blot images of nucleosome demethylation assays performed with KDM6B and gH1.5.
(E-F) Uncropped western blot images of nucleosome demethylation assays performed with KDM6B using 20N20 and 20N20-H2AK119C-DCA-ub1 nucleosomes as substrates. 
(G-H) Uncropped western blot images of single-turnover nucleosome demethylation assays performed by KDM6B using 20N20 and 20N20-H2AK119C-DCA-ub1 nucleosomes as substrates.
Data S4. Data files, related to Figures S1, S2 and S9. 
(A-D) Uncropped gels of purified (A) KDM6B, (B) KDM6B mutants, KDM6B-nucleosome complex, (C) gH1.5, and (D) nucleosome substrates. 
(E) Uncropped EMSA gels showing KDM6B binding to 1N1 and 20N20 nucleosomes.
Data S5. Data files, related to Figure S9. 
(A-B) Uncropped western blot images of time-course nucleosome demethylation assays performed by KDM6B using 20N20 and 20N20-H2AK119C-DCA-ub1 nucleosomes as substrates. (A) H3K27me3, (B) H3 
(C-D) Uncropped western blot images of time-course nucleosome demethylation assays performed by KDM6B using 20N20 and 20N20-H2AK119ub1 nucleosomes as substrates. (C) H3K27me3, (D) H3
(E-F) Uncropped western blot images of single-turnover nucleosome demethylation assays performed by KDM6B using 20N20 and 20N20-H2AK119ub1 nucleosomes as substrates. (E) H3K27me3, (F) H3
Data S6. Excel file containing quantification data from EMSA experiments related to Figure 2B.
Data S7. Excel file containing raw data for FRET experiments, related to Figures 2D, 3D, 4D and 5D.
Data S8. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure 2C.
Data S9. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figures 3C, 4C and 5C.
Data S10. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure 6C.
Data S11. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure 6F.
Data S12. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure 6G.
Data S13. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure S9C.
Data S14. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure S9D.
Data S15. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure S9E.
DOI: 10.17632/gmgxzphgrc.1
title: Structural mechanism of H3K27 demethylation and crosstalk with heterochromatin markers - Lin et al

description: Data S1. Data files, related to Figure 2.
(A-F) Uncropped electrophoretic mobility shift assay (EMSA) gels showing nucleosome binding by KDM6B.
(G-H) Uncropped western blot images of nucleosome demethylation assays.
Data S2. Data files, related to Figures 3, 4 and 5.
(A-J) Uncropped EMSA gels showing nucleosome binding by KDM6B and its mutants.
(K-L) Uncropped western blot images of nucleosome demethylation assays performed with KDM6B and its mutants.
Data S3. Data files, related to Figure 6.
(A-D) Uncropped western blot images of nucleosome demethylation assays performed with KDM6B and gH1.5.
(E-F) Uncropped western blot images of nucleosome demethylation assays performed with KDM6B using 20N20 and 20N20-H2AK119C-DCA-ub1 nucleosomes as substrates. 
(G-H) Uncropped western blot images of single-turnover nucleosome demethylation assays performed by KDM6B using 20N20 and 20N20-H2AK119C-DCA-ub1 nucleosomes as substrates.
Data S4. Data files, related to Figures S1, S2 and S9. 
(A-D) Uncropped gels of purified (A) KDM6B, (B) KDM6B mutants, KDM6B-nucleosome complex, (C) gH1.5, and (D) nucleosome substrates. 
(E) Uncropped EMSA gels showing KDM6B binding to 1N1 and 20N20 nucleosomes.
Data S5. Data files, related to Figure S9. 
(A-B) Uncropped western blot images of time-course nucleosome demethylation assays performed by KDM6B using 20N20 and 20N20-H2AK119C-DCA-ub1 nucleosomes as substrates. (A) H3K27me3, (B) H3 
(C-D) Uncropped western blot images of time-course nucleosome demethylation assays performed by KDM6B using 20N20 and 20N20-H2AK119ub1 nucleosomes as substrates. (C) H3K27me3, (D) H3
(E-F) Uncropped western blot images of single-turnover nucleosome demethylation assays performed by KDM6B using 20N20 and 20N20-H2AK119ub1 nucleosomes as substrates. (E) H3K27me3, (F) H3
Data S6. Excel file containing quantification data from EMSA experiments related to Figure 2B.
Data S7. Excel file containing raw data for FRET experiments, related to Figures 2D, 3D, 4D and 5D.
Data S8. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure 2C.
Data S9. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figures 3C, 4C and 5C.
Data S10. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure 6C.
Data S11. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure 6F.
Data S12. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure 6G.
Data S13. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure S9C.
Data S14. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure S9D.
Data S15. Excel file containing ImageJ-based quantification data for nucleosome demethylation assays, related to Figure S9E.
DOI: 10.15468/dl.bk9jur
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ACS3780"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009735-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/wgz-rxa-lgq
title: Rumex aquaticus L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.15468/dl.pzcgp8
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amaranthus hybridus",
 "Country is Slovenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009736-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mqrb5w
title: Occurrence Download

description: A dataset containing 32127367 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "Country is Germany",
 "HasCoordinate is true"
 ]
}

 The dataset includes 32127367 records from 1317 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009692-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1403366.10fu
title: SH1403366.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5517/ccdc.csd.cc2p6m4p
title: CCDC 2479012: Experimental Crystal Structure Determination

description: Related Article: R. Sribala, N. Srinivasan, R.V.Krishnakumar, R.A. Jeyaram, R. Premkumar, S. Indumathi|2026|J.Chem.Cryst.|56||doi:10.1007/s10870-025-01060-7
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.