cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.rk8btg
title: Occurrence Download

description: A dataset containing 10674 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE",
 "Geometry POLYGON((-100.551 36.917,-71.79 36.917,-71.79 49.612,-100.551 49.612,-100.551 36.917))",
 "Year is greater than or equal to 2024",
 "RecordedBy is one of (drjanee, droptyne69, drosera21, dsmith83102, DT, dtwilliams, Duane Bertels, Dustin Mitchell, dutchessofalchemy, Dylan Cebulske, Dylan Stephens, dynyaaa, Dyspteris abortivaria, E-C Cox, e-solveig, E. Cano, eamonccorbett, eastwell, eb22at, ebaitchman, ebbbbbbbbbbt, ecologist_amy, ecologygirl16, ecroman2, Ed O'Connor, Ed Ramthun, edb123, edelaquess, edfuchs, eeriefrog, ehatch84, elasita, elcee, Elena Gilroy, Elijah Schumacher, elijah_okeefe, elise_0704, eliza_thatch, Elizabeth Carlisle, Elizabeth Haber, Elizabeth Wolden, elizenviro, Ella Nastri, ellamcb, ellaschultz, elliekat4, ellieology, Elliott Drinkwater, elmslie, elprofer)",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 10674 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008186-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dhyhhp
title: Occurrence Download

description: A dataset containing 159454 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen, Observation)",
 "Geometry POLYGON((-116.2 43.97,-104.79 43.97,-104.79 45.16,-116.2 45.16,-116.2 43.97))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY-NC 4.0, CC-BY 4.0, CC0 1.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 159454 records from 256 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008098-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8pvqxx
title: Occurrence Download

description: A dataset containing 378850 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belgium",
 "TaxonKey is one of (Aponogeton distachyos, Arthurdendyus triangulatus, Cabomba caroliniana, Callosciurus finlaysonii, Cherax destructor, Corvus splendens, Crassula helmsii, Elodea densa, Eriocheir sinensis, Erythranthe guttata, Faxonius immunis, Faxonius juvenilis, Faxonius rusticus, Faxonius virilis, Gambusia affinis, Heracleum mantegazzianum, Heracleum persicum, Heracleum pubescens, Houttuynia cordata, , Impatiens glandulifera, Koenigia polystachya, Lagarosiphon major, Lepomis gibbosus, Limnoperna fortunei, Ludwigia grandiflora, Ludwigia peploides, Lysichiton americanus, Morone americana, Muntiacus reevesi, Myriophyllum aquaticum, Myriophyllum heterophyllum, Pacifastacus leniusculus, Petasites japonicus, Pontederia cordata, Procambarus acutus, Procambarus clarkii, Procambarus virginalis, Pseudorasbora parva, Pycnonotus cafer, Saururus cernuus, Sciurus carolinensis, Sciurus niger, Solenopsis invicta, Solenopsis richteri, Threskiornis aethiopicus, Vespa velutina, Zizania latifolia)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 378850 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008125-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.et4ezd
title: Occurrence Download

description: A dataset containing 4692 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "DistanceFromCentroidInMeters is greater than or equal to 2000",
 "TaxonKey is Lithognathus mormyrus"
 ]
}

 The dataset includes 4692 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008187-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17237406
title: R2Bm Mechanism Files
DOI: 10.5281/zenodo.17237405
title: R2Bm Mechanism Files
DOI: 10.15468/dl.7ahwtg
title: Occurrence Download

description: A dataset containing 42027 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE",
 "Geometry POLYGON((-100.551 36.917,-71.79 36.917,-71.79 49.612,-100.551 49.612,-100.551 36.917))",
 "Year is greater than or equal to 2024",
 "RecordedBy is one of (emcarey1014, emccormick26, emcee747, emcknigh, emdupuis, Emilie I. Dion, Emily, Emily Christian, Emily Dunsmore, Emily Franzen, emilyhollander, eml23, Emma Benscoter, Emma Diaz, Emma Loomis-Amrhein, Emma Posadovsky, emmags12, emmitl, endersmoothie, epic2112, er-birds, Eric Giles, Eric Knight, Eric M Powell, Eric Williams, Erik Danielsen, erik_p, Erika Mitchell, Erin, Erin Doyle, Erin Haase, Erin Henson, Erin Stebbins, Erin Yokoi, erin-m, erincall, eringorn, ermasmith13, estehr, etagasheva, Ethan, Ethan Olewnik, ethan_58, Evan Lipton, Evan of Indiana, Evan Sedlock, Evan Spears, Evan Wahmhoff, evanaturalist, evelynmorton)",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 42027 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008188-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18705641
title: Data and analysis for "Tunable Low-Rate Genomic Recombination with Cre-lox in Escherichia coli: A Versatile Tool for Anoxic Environmental Biosensing and Synthetic Biology"

description: Experimental data, analyses code and DNA sequencing used in our study focusing on titratable site-specific genomic recombination in Escherichia coli mediated by Cre-recombinase and recombinase-based arsenite biosensors. Data and code can be used to generate the figures presented in the manuscript.

Biorxiv preprint: https://doi.org/10.1101/2024.10.02.616356

Contents organized as follows:



Data_and_analysis.zip: includes experimental data and code to generate figures and statistical analysis.

Sequences.zip: includes plasmids and short DNA-seq used to verify genetic constructs.
DOI: 10.5281/zenodo.18705642
title: Data and analysis for "Tunable Low-Rate Genomic Recombination with Cre-lox in Escherichia coli: A Versatile Tool for Anoxic Environmental Biosensing and Synthetic Biology"

description: Experimental data, analyses code and DNA sequencing used in our study focusing on titratable site-specific genomic recombination in Escherichia coli mediated by Cre-recombinase and recombinase-based arsenite biosensors. Data and code can be used to generate the figures presented in the manuscript.

Biorxiv preprint: https://doi.org/10.1101/2024.10.02.616356

Contents organized as follows:



Data_and_analysis.zip: includes experimental data and code to generate figures and statistical analysis.

Sequences.zip: includes plasmids and short DNA-seq used to verify genetic constructs.
DOI: 10.5281/zenodo.17460428
title: Testing the Enskog Kinetic Theory with Direct Simulation Monte Carlo and Molecular Dynamics

description: This sets of files contains the analysis of a granular suspension in a low-viscosity carrier fluid using Brownian dynamics simulations, the direct simulation Montecarlo method, and theory.

Please refer to the README file for a description of all the files, and find in every file a detailed description of its contents
DOI: 10.5281/zenodo.18764455
title: Testing the Enskog Kinetic Theory with Direct Simulation Monte Carlo and Molecular Dynamics

description: This sets of files contains the analysis of a granular suspension in a low-viscosity carrier fluid using Brownian dynamics simulations, the direct simulation Montecarlo method, and theory.

Please refer to the README file for a description of all the files, and find in every file a detailed description of its contents
DOI: 10.15468/dl.aab8zs
title: Occurrence Download

description: A dataset containing 770 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "DistanceFromCentroidInMeters is greater than or equal to 2000",
 "TaxonKey is Lutjanus ehrenbergii"
 ]
}

 The dataset includes 770 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008189-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18764134
title: ESM1: Tabulated clearance envelopes (CIN/GLI/GNI) and 2D cross-sections for depot-scale railway clearance verification

description: This record provides the data package supporting the manuscript “[Manuscript title]” (submitted to Railway Engineering Science). The package contains (i) tabulated 2D perimeter points of the CIN, GLI, and GNI envelopes as a function of curvature radius and turn direction; (ii) representative transverse cross-sections extracted from terrestrial laser scanning (TLS) point clouds (including COMPLIANT, INTERMEDIATE and FULL examples); (iii) an obstacle-point subset with obstacle identifiers and families for obstacle-level clearance checking; and (iv) derived outputs (CSV manifests and plots) that reproduce the reported clearance classifications and figures.

Coordinate convention: X is lateral (positive to the right in the direction of travel); Y is vertical with Y=0 at the GLI reference point; all units are meters.

Contents:





envelopes/: CIN/GLI/GNI tabulations (Excel + long-form CSV export)




sections/: cross-sections (X,Y) with PK, radius and turn metadata




obstacles/: obstacle-point subset with obstacle_id, family, PK and (X,Y) points




derived/: signed-distance minima and FULL/INTERMEDIATE/COMPLIANT classification manifests, plus overlay plots



How to reproduce: Use the companion reference implementation (ESM2) to recompute signed-distance minima and regenerate plots/CSVs from this dataset.
DOI: 10.5281/zenodo.18764133
title: ESM1: Tabulated clearance envelopes (CIN/GLI/GNI) and 2D cross-sections for depot-scale railway clearance verification

description: This record provides the data package supporting the manuscript “[Manuscript title]” (submitted to Railway Engineering Science). The package contains (i) tabulated 2D perimeter points of the CIN, GLI, and GNI envelopes as a function of curvature radius and turn direction; (ii) representative transverse cross-sections extracted from terrestrial laser scanning (TLS) point clouds (including COMPLIANT, INTERMEDIATE and FULL examples); (iii) an obstacle-point subset with obstacle identifiers and families for obstacle-level clearance checking; and (iv) derived outputs (CSV manifests and plots) that reproduce the reported clearance classifications and figures.

Coordinate convention: X is lateral (positive to the right in the direction of travel); Y is vertical with Y=0 at the GLI reference point; all units are meters.

Contents:





envelopes/: CIN/GLI/GNI tabulations (Excel + long-form CSV export)




sections/: cross-sections (X,Y) with PK, radius and turn metadata




obstacles/: obstacle-point subset with obstacle_id, family, PK and (X,Y) points




derived/: signed-distance minima and FULL/INTERMEDIATE/COMPLIANT classification manifests, plus overlay plots



How to reproduce: Use the companion reference implementation (ESM2) to recompute signed-distance minima and regenerate plots/CSVs from this dataset.
DOI: 10.15126/surreydata.902016
title: Interview transcripts for PhD entitled "Gentrification, performance, and the practice of space: walking and mapping narratives of home"

description: Transcripts of interviews carried out with residents from the Alton Estate (London), Deptford, and the Townhill Park Estate, Southampton. The interviews were carried out between 2021 and 2024 as part of my PhD practice projects.
DOI: 10.17632/xjg2p8wbn4
title: Unveiling Trends in Supply Chain Simulation: Implementing an Index of Complexity

description: Full data of the Structured Literature Review entitled "Unveiling Trends in Supply Chain Simulation: Implementing an Index of Complexity" and details of the factors assigned to each contribution and of the final Index of Complexity calculated for the simulation model
DOI: 10.17632/jx9kxvcymm
title: Synthesis and Physical Properties Characterization of Artificial Seawater Samples Ranging from 36,052 ppm (Standard Seawater) to 80,027 ppm

description: A data repository containing sample preparation protocols, physical property measurements, and elemental composition analysis for artificial seawater solutions.
Repository Structure
01_Sample_Preparation/
Documentation and recipes for preparing artificial seawater samples at different Total Dissolved Solids (TDS) concentrations.
• exact_salt_composition.csv - Detailed breakdown of salt components and their exact concentrations used in each sample
02_Physical_Properties/
Physical and chemical characterization data for samples across different TDS ranges.
• density_averages_by_tds_vs_temperatures.csv - Average density measurements organized by TDS concentration vs temperature
• density_trials_data.csv - Density measurements organized by TDS concentration samples and repeated trials
• DensityVsTemperatureAtTDS.svg - Density vs Temperature of TDS samples plot
• ec_and_pH_by_tds.csv - Electrical conductivity (EC) and pH measurements as a function of TDS
• osmolality_data.csv - Osmolality measurements for sample osmotic potential analysis
• OsmolalityVsTDS.svg - Osmolality vs TDS plot
• pHvsTDS.svg - pH vs TDS plot of the sample prepared
• physical_properties_summary_overall.csv - Comprehensive summary of all physical properties across all samples
03_ICP-OES/
Inductively Coupled Plasma Optical Emission Spectroscopy (ICP-OES) elemental analysis results.
• B Expected vs. ICP-OES.svg - Comparison of Boron expected and observed ICP-OES
• Ca Expected vs. ICP-OES.svg - Comparison of Calcium expected and observed ICP-OES
• ICP-OES_by_tds.csv - Elemental composition data organized by TDS concentration
• ICP-OES_spikes.csv - ICP-OES spike recovery data for method validation and quality control
• K Expected vs. ICP-OES.svg - Comparison of Potassium expected and observed ICP-OES
• Mg Expected vs. ICP-OES.svg - Comparison of Magnesium expected and observed ICP-OES
• Na Expected vs. ICP-OES.svg - Comparison of Sodium expected and observed ICP-OES
• S Expected vs. ICP-OES.svg - Comparison of Sulfur expected and observed ICP-OES
• Sr Expected vs. ICP-OES.svg - Comparison of Strontium expected and observed ICP-OES
DOI: 10.17632/xjg2p8wbn4.1
title: Unveiling Trends in Supply Chain Simulation: Implementing an Index of Complexity

description: Full data of the Structured Literature Review entitled "Unveiling Trends in Supply Chain Simulation: Implementing an Index of Complexity" and details of the factors assigned to each contribution and of the final Index of Complexity calculated for the simulation model
DOI: 10.17632/jx9kxvcymm.1
title: Synthesis and Physical Properties Characterization of Artificial Seawater Samples Ranging from 36,052 ppm (Standard Seawater) to 80,027 ppm

description: A data repository containing sample preparation protocols, physical property measurements, and elemental composition analysis for artificial seawater solutions.
Repository Structure
01_Sample_Preparation/
Documentation and recipes for preparing artificial seawater samples at different Total Dissolved Solids (TDS) concentrations.
• exact_salt_composition.csv - Detailed breakdown of salt components and their exact concentrations used in each sample
02_Physical_Properties/
Physical and chemical characterization data for samples across different TDS ranges.
• density_averages_by_tds_vs_temperatures.csv - Average density measurements organized by TDS concentration vs temperature
• density_trials_data.csv - Density measurements organized by TDS concentration samples and repeated trials
• DensityVsTemperatureAtTDS.svg - Density vs Temperature of TDS samples plot
• ec_and_pH_by_tds.csv - Electrical conductivity (EC) and pH measurements as a function of TDS
• osmolality_data.csv - Osmolality measurements for sample osmotic potential analysis
• OsmolalityVsTDS.svg - Osmolality vs TDS plot
• pHvsTDS.svg - pH vs TDS plot of the sample prepared
• physical_properties_summary_overall.csv - Comprehensive summary of all physical properties across all samples
03_ICP-OES/
Inductively Coupled Plasma Optical Emission Spectroscopy (ICP-OES) elemental analysis results.
• B Expected vs. ICP-OES.svg - Comparison of Boron expected and observed ICP-OES
• Ca Expected vs. ICP-OES.svg - Comparison of Calcium expected and observed ICP-OES
• ICP-OES_by_tds.csv - Elemental composition data organized by TDS concentration
• ICP-OES_spikes.csv - ICP-OES spike recovery data for method validation and quality control
• K Expected vs. ICP-OES.svg - Comparison of Potassium expected and observed ICP-OES
• Mg Expected vs. ICP-OES.svg - Comparison of Magnesium expected and observed ICP-OES
• Na Expected vs. ICP-OES.svg - Comparison of Sodium expected and observed ICP-OES
• S Expected vs. ICP-OES.svg - Comparison of Sulfur expected and observed ICP-OES
• Sr Expected vs. ICP-OES.svg - Comparison of Strontium expected and observed ICP-OES
DOI: 10.15468/dl.6ssvxj
title: Occurrence Download

description: A dataset containing 1518 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation, Machine Observation)",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Saguinus oedipus"
 ]
}

 The dataset includes 1518 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008190-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qrtbcw
title: Occurrence Download

description: A dataset containing 20632 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE",
 "Geometry POLYGON((-100.551 36.917,-71.79 36.917,-71.79 49.612,-100.551 49.612,-100.551 36.917))",
 "Year is greater than or equal to 2024",
 "RecordedBy is one of (evit, Evonne Potts, Evy N, Ezekiel Herrera-Bevan, Ezra Singler, fahminr232, fallriver22, Farland H., farmer6379, farmergirl55, farmgirl117, fart, Fdichfovd, feliciafrass1, fernyguy, fig_leaf, finnwhitmee, Fiona, flanaganapuss, Fluff Berger, flyingember, fortunebones, fotheris, Frances Tackaberry, Frank Lenik, frankvereline8, François Plourde - Renard frak, François Rousseu, Fraser Watson, FreckLes, Fred Watson, fredatwood, fromtheloam, frostfox, Frédérick Létourneau, fullmoonbloom, G P Witteveen, gabbyrobles, gabrialkdingo, Gabriel Andrle, Gabriel Diggs, Gabriel Schneider, gangaa, garethrussell, Garrett Weese, Gary James, Gary S, Gary Zenitsky, gauthier-ambioterra, Gavin Schaefer)",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 20632 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008191-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18764469
title: Analytical Summary of Research Findings – Cyprus Case Study

description: The table was elaborated for the research project Civil Disorder in Pandemic-ridden European Union. The latter was financially supported by the National Science Centre, Poland [grant number 2021/43/B/HS5/00290].
DOI: 10.5281/zenodo.18764470
title: Analytical Summary of Research Findings – Cyprus Case Study

description: The table was elaborated for the research project Civil Disorder in Pandemic-ridden European Union. The latter was financially supported by the National Science Centre, Poland [grant number 2021/43/B/HS5/00290].
DOI: 10.15468/dl.ftp7dw
title: Occurrence Download

description: A dataset containing 10211 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "DistanceFromCentroidInMeters is greater than or equal to 2000",
 "TaxonKey is Oblada melanura"
 ]
}

 The dataset includes 10211 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008192-260221153910048/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5fja6k
title: Occurrence Download

description: A dataset containing 43191 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arthropoda",
 "DatasetKey is Miscellaneous records held by BIS",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-25.03991 31.75, 41.65954 31.75, 41.65954 71.53037, -25.03991 71.53037, -25.03991 31.75))"
 ]
}

 The dataset includes 43191 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0216885-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vjeuw3
title: Occurrence Download

description: A dataset containing 3317 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thysanocardia procera (Möbius, 1875)"
 ]
}

 The dataset includes 3317 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126600-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.43pr92
title: Occurrence Download

description: A dataset containing 36050 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "InstitutionCode is one of (MSB, MSB-UNM)",
 "TaxonKey is Amphibia"
 ]
}

 The dataset includes 36050 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0216484-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2nn83g
title: Occurrence Download

description: A dataset listing the 2 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Amphipholis squamata (Delle Chiaje, 1828)"
 ]
}

 The dataset's 2 records were derived from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126592-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7agad5
title: Occurrence Download

description: A dataset containing 646 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Logfia depressa (A.Gray) Holub"
 ]
}

 The dataset includes 646 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0216887-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.