cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19328816.v3
title: Reconstruction of Large and Complex Cranial Defects

description: This repository contains the automatically generated (with minor manual post-processing) cranial implants (in NRRD format) for the 29 craniotomy skulls in the MUG500+ dataset (https://doi.org/10.6084/m9.figshare.9616319) and the 11 defective skulls from Task 2 of the AutoImplant II challenge (https://autoimplant2021.grand-challenge.org/). <br> The implants together with the corresponding skulls could serve the following purposes: 1) as test samples, where the implants are the baseline results 2) as the training samples 3) as educational tools (e.g., 3D Printing) <br> <br> The video ('implant manual cleaning.mp4') shows how the resulting implant (subtraction between the reconstructed skull and the defective skull) can be post-processed manually using 3D slicer. <br> If you use any part of the dataset, please cite the following: <br> (1) Li J., et al. MUG500+: Database of 500 High-resolution Healthy Human Skulls and 29 Craniotomy Skulls and Implants. Data in Brief, Elsevier, 2021. (2) Li, J., et al. Back to the Roots: Reconstructing Large and Complex Cranial Defects using an Image-based Statistical Shape Model <br>
DOI: 10.6084/m9.figshare.24821004.v1
title: 多模条码图像

description: 使用基于CNN的图像识别技术进行实时温度测量的先决条件是创建与温度相关的多模条码图像数据集。利用彩色图将 10,000 组光谱数据（在 100.0°C 至 1.30°C 之间以 1.40°C 的间隔记录 0 次）转换为条形码图像进行训练。每个与温度相关的多模光谱被测量 20 次，并转换为条形码图像作为测试集。然后将该测试集输入到预训练模型中进行实时温度测量。也就是说，提供的数据集中的每个温度文件包含120张图片，其中前100张图片用于模型训练，后20张图片用于检测测试。
DOI: 10.6084/m9.figshare.28747652.v1
title: RNAcentral data

description: Sequences of the eukaryotic LSU rRNAs for our MSA studies
DOI: 10.17632/mbpbx8hn4p
title: Data for: Effects of maternal anxiety and depression on fetal neuro-development

description: Data on light and sound stimulation of foetuses and fetal eye blink reactions
DOI: 10.6084/m9.figshare.11996952.v6
title: books_reformatted

description: Reformatted books dataset for Introduction to R Library Carpentry session<br>
DOI: 10.6084/m9.figshare.12458591.v1
title: HADDOCK refined models of ACE2 with the bound RBD of SARS-CoV-2 Spike glycoprotein

description: The zip file includes all calculations related to ACE2/RBD of S protein from SARS-CoV-2 performed with HADDOCK. After unzipping the file, two folders appear. These include the models based on the crystal structure 6M0J and the cryo-EM structure 6M17. Each folder has subdirectories variants, ALA_scan, and UniProt, and specifically for 6M17, an additional subdirectory is included, PyMOL_models_6M17. This directory includes additional .pdb and .cif files. The initial .pdb files that were used to produce all reported variants are placed in each folder along with parameter files to reproduce the HADDOCK calculations.
DOI: 10.6084/m9.figshare.27605234.v1
title: Supplementary Material from Global analysis of acoustic frequency characteristics in birds

description: Data_RCodes.zip
DOI: 10.6084/m9.figshare.3829986.v1
title: lfw.tgz

description: Part of the LFW dataset used in scikit-learn.
DOI: 10.6084/m9.figshare.16627099.v1
title: GWAS_Chicken data

description: Genotyping was performed using the 600K Affymetrix Axiom Chicken Genotyping Array, including 435,867 SNPs across the entire chicken genome. The genomic data format is Plink(GWAS_chicken.bim,GWAS_chicken.fam,GWAS_chicken.bed). And there are 839 samples in our study.
DOI: 10.6084/m9.figshare.7345967.v1
title: Supplementary Material for: Ketamine’s Effects on the Glutamatergic and GABAergic Systems: A Proteomics and Metabolomics Study in Mice

description: Ketamine, a noncompetitive, voltage-dependent N-Methyl-D-aspartate receptor (NMDAR) antagonist, has been shown to have a rapid antidepressant effect and is used for patients experiencing treatment-resistant depression. We carried out a time-dependent targeted mass spectrometry-based metabolomics profiling analysis combined with a quantitative based on in vivo <sup>15</sup>N metabolic labeling proteome comparison of ketamine- and vehicle-treated mice. The metabolomics and proteomics datasets were used to further elucidate ketamine’s mode of action on the gamma-aminobutyric acid (GABA)ergic and glutamatergic systems. In addition, myelin basic protein levels were analyzed by Western Blot. We found altered GABA, glutamate and glutamine metabolite levels and ratios as well as increased levels of putrescine and serine – 2 positive modulators of the NMDAR. In addition, GABA receptor (GABAR) protein levels were reduced, whereas the alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor (AMPAR) subunit Gria2 protein levels were increased upon ketamine treatment. The significantly altered metabolite and protein levels further significantly correlated with the antidepressant-like behavior, which was assessed using the forced swim test. In conclusion and in line with previous research, our data indicate that ketamine impacts the AMPAR subunit Gria2 and results in decreased GABAergic inhibitory neurotransmission leading to increased excitatory neuronal activity.
DOI: 10.17632/b3n3wk5p7g
title: ERB Dataset MJ

description: The dataset population consist of primary school headteachers in the northern region of Malaysia, who is attached to the Ministry of Education (MoE), Malaysia. The total number of 167 respondents responded through an online survey.
DOI: 10.6084/m9.figshare.1482092.v1
title: Buffalo cheese whey proteins, identification of a 24 kDa protein and characterization of their hydrolysates: in vitro gastrointestinal digestion

description: Data from experiments that originated figures presented in the paper Buffalo cheese whey proteins, identification of the 24 kDa protein and characterization of their hydrolysates in vitro gastrointestinal digestion.
DOI: 10.17632/z2ypjfwh5j
title: Data for the Wind field of Nan'ao Island, China based on CFD numerical simulation

description: This dataset contains all the simulated wind field data over Nan’ao Island, China and computational settings of CFD simulation in the manuscript titled 'Impact of Topography on the Near-Surface Wind Characteristics over a Hilly Island Using CFD Simulation' that has been submitted to Journal of Geophysical Research-Atmospheres. The computational settings of CFD simulation including the mesh scheme, boundary conditions, and solution scheme can be found in the file ‘CFD settings of Nan'ao Island.cas’, which can be analyzed using Ansys Fluent software developed by Ansys Inc.
DOI: 10.6084/m9.figshare.28656979.v1
title: Human Manu jumping data weblinks from Mastering the Manu – How humans create large splashes

description: YouTube web links to videos of humans performing 50 Manu jumps, as used in our study.
DOI: 10.17632/6yh4jzvgz8
title: 1.5 mL Tube Holder - Base and Lid

description: Supplementary Data for ''Optimising the manufacture of perfluorocarbon nanodroplets through varying sonication parameters''.

These .stl files are for the ice bath and 1.5 mL eppendorf tube holder lid (lid snaps onto ice bath). Suitable for printing in PLA.
DOI: 10.6084/m9.figshare.25095953.v1
title: Supplementary Table 5A/Figure 2A/2B source data

description: Statistically significant results from epigenome wide association study comparing embryonal tumors to non-tumor tissue in the unadjusted model.
DOI: 10.6084/m9.figshare.25860382.v4
title: <b>Is China-Taiwan Rapprochement Possible?</b><b> </b><b>Experimental Evidence from Taiwan</b>

description: This is a conjoint experiment on Taiwan's public opinion on the hypothetical Cross-Strait agreements where China and Taiwan make policy concessions on security, economy, and sovereignty. <br>
DOI: 10.6084/m9.figshare.1454015.v2
title: On Country The Nyikina Cultural Database

description: To demonstrate the capacities and capabilties of Figshare as the first node in the Nyikina Cultral Database (NCD) as described in the paper published amongst this fileset.
DOI: 10.6084/m9.figshare.19706530.v1
title: H5AD scRNAseq data from "Sustained TREM2 stabilization accelerates microglia heterogeneity and Aβ pathology in a mouse model of Alzheimer’s disease" study

description: Use scanpy.api.read_h5ad to load AnnData. This AnnData stores the processed data used for the figures related to scRNAseq experiments. The objects contain normalized gene expression data, metadata including cells annotation and UMAP coordinates. <br> <strong>File Extension Specification:</strong> APP23xPS45xTREM2-IPD_full.h5ad: This AnnData stores the data used for Figure 2 (all genotypes, logitudinal for FULL FRONTAL CORTEX) APP23xPS45xTREM2-IPD_Microglia.h5ad: This AnnData stores the data used for Figure 3 and S4 (all genotypes, logitudinal for MICROGLIA) APP23xPS45xTREM2-IPD_Oligodendrocytes.h5ad: This AnnData stores the data used for Figure S6 (all genotypes, logitudinal for OLIGODEDROCYTES) WT_TREM2-IPD.h5ad: This AnnData stores the data used for Figure S3 (Wild Type & TREM2-IPD genotypes, logitudinal for FULL FRONTAL CORTEX)
DOI: 10.6084/m9.figshare.8866418.v1
title: Equipment Selection of Hydraulic Fracturing Hard Roof in Fully Mechanized Face at Initial Mining data.docx

description: 16 hydraulic fracturing holes were designed in 1310 fully mechanized mining face. Each hydraulic fracturing hole features with the 50～55°between drilling holes and horizontal plane, the vertial side wall of roadway, the distance between drilling holes as 10m and the depth of drilling holes as 30m. Each borehole is sealed firstly from the bottom and conducted hydraulic fracturing three times with every 3 m intervals. The sealing pressure of sealing hole pump injecting clean water into the Hole-pacher is 13-14 MPa. The criterion for the end of hydraulic fracturing is that the water gushing around the hydraulic fracturing holes (boreholes) can be seen or the fracturing sound of the roof being pre-cracked can be heard. During construction, the flow rate of the three-plunger pump ranges from 15.3 to 20.2 L/min.
DOI: 10.17632/5bpcscd6wp
title: Data for: Early-Middle Permian plutons in Langshan area, western Inner Mongolia, China, and their tectonic implications

description: LA-ICP-MS zircon U–Pb data and major and trace element compositions of the Early–Middle Permian plutons in the Langshan area.
DOI: 10.6084/m9.figshare.21606792.v1
title: 2022 6 PAR .pdf

description: This empirical analysis presents teaching models of critical pedagogy. It identifies teaching activities and strategies that resemble characteristics of critical pedagogy. The research applies participatory action research (PAR) to see how critical pedagogy can be introduced through language teaching in Bahasa Indonesia and English. The study was conducted in Jombang, East Java, Indonesia. The researchers work collaboratively with the Indonesia association teachers or Persatuan Guru Republik Indonesia (PGRI) and student-teacher at one private university in this municipality. Literature regarding methods in teaching writing for students in the EFL context is explored and used for analysing the data. The findings indicate that Critical pedagogy can be implemented through different teaching strategies. All the strategies resemble critical pedagogy principles, such as Historicity, dialogic, authenticity, and liberation models.
DOI: 10.6084/m9.figshare.11932860.v1
title: Performance Summary Display Analysis.

description: Displays were identified, classified, and elements counted and coded. The performance summary display ontology provides a set of descriptions of components of displays that have been used ​to annotate performance feedback visualizations.
DOI: 10.6084/m9.figshare.24030213.v1
title: <b>Aesthetic Chills Modulate Reward Learning in Anhedonic Depression</b>

description: This repository contains the data analyzed in the study "Aesthetic Chills Modulate Reward Learning in Anhedonic Depression" by Jain et al. (2022). The study investigated whether experiencing aesthetic chills could enhance reward learning and positive affect in individuals with elevated depressive symptoms and anhedonia.The data includes:Participant demographic information (age, sex, ethnicity)Questionnaire scores on the Beck Depression Inventory (BDI) and Snaith-Hamilton Pleasure Scale (SHAPS) used to assess depression severity and anhedoniaProbabilistic Reward Task (PRT) data before and after exposure to chill-eliciting videos, including reward bias and discriminability metricsSelf-reported ratings of emotional valence, arousal, chills intensity, goosebumps, etc.Classification of participants into High Anhedonia, Low Anhedonia, and Control groupsThe data is anonymized to remove any personally identifiable information. Variables are labelled clearly and a codebook is provided to define abbreviations and explain the analysis procedures. The repository structure promotes reproducibility by including both the raw data and analysis code.This data enables further research into non-pharmacological aesthetic interventions for depression and specifically targeting reward processing deficits. It can facilitate metanalysis and replication studies on the phenomenon of chills. The availability of both pre and post intervention metrics is valuable for computational modeling work as well.
DOI: 10.6084/m9.figshare.28737392.v1
title: Comparative In Vitro Analysis of Various Repair Materials in the Restoration of Zirconia Fixed Partial Dentures

description: test results
DOI: 10.17632/8hdcnchydk
title: Data for: Surgical Outcomes after Myelomeningocele Repair in Lusaka, Zambia
DOI: 10.17632/dg64p8wmj9
title: Supplementary material 1 (S1) and 2 (S2): Predicting soil moisture conditions across a heterogeneous boreal catchment using terrain indices

description: S1: DEM preparation and terrain indice modeling, Python Code and DEM

This folder contains all data needed to produce the terrain indices modeled within the paper.
It contains the Python Code for DEM aggregation, hydrological correction and terrain indice modeling

S2: Interactive OPLS analysis loading plot for the Krycklan catchment 
and DEM-derived terrain indices in respect of soil moisture predictions. 

This folder contains the Interactive version of the OPLS analysis loading plot (Fig 2.) 
for the Krycklan catchment and DEM-derived terrain indices in respect of soil moisture predictions.
In the interactive version of this graph (html), all labels are visible by moving the cursor on top of each circle. 
By clicking on a circle the terrain chosen index group will be highlighted

Variables that cluster closely within the same neighborhood along the far sides 
of the horizontal axis are the more robust soil moisture predictors across DEM 
scales. Colored guides connect terrain indices moving from small to large resolutions 
as depicted by the symbol size. In the loading plot, predictive performance increases 
with increased distance from 0 on the predictive axis (pq[1]). Negative and positive values 
on the (pq[1]) axis correspond to negative and positive correlations with Y. The orthogonal axis 
(poso[1]) represents how much of the variation for each variable was not correlated with the determinant (Y).
DOI: 10.17605/osf.io/r48pu
title: Factors Associated with Profiles among Nurses’ Missed Nursing Care, Nurse Leaders’ Abusive Supervision, and Leader-Member Exchange: A Latent Profile Analysis
DOI: 10.6084/m9.figshare.19345160.v1
title: Supplementary Material for: At the Core of Depression: A Diagnostic Interview of the Core Features of Depression

description: <b><i>Introduction:</i></b> Valid and reliable methods for diagnosing depression are essential. The present study aimed to test the performance of a new diagnostic interview for depression focusing on the core symptoms of depression. <b><i>Method:</i></b> We developed a diagnostic interview for depression: the CORE Diagnostic Interview, CORE-DI, which assesses each of the core features of depression on the four dimensions: quality, reactivity, globality, and fluctuations over time. The diagnostic performance of this interview was tested in a clinical study including 83 individuals presenting with various depressive symptoms, who were interviewed independently (1) by means of the CORE-DI and the Mini-International Neuropsychiatric Interview (M.I.N.I.), and (2) by highly skilled specialists in depression representing gold standard diagnoses. <b><i>Results:</i></b> We compared the outcome of the CORE-DI, the M.I.N.I., and the diagnosis made by clinicians, respectively, versus the gold standard diagnosis, using diagnostic efficiency statistics. The CORE-DI diagnosed depression with a high specificity (0.91, 95% CI: 0.85–0.97, for International Classification of Diseases [ICD]-10 criteria and 0.88, 95% CI: 0.81–0.95, for Diagnostic and Statistical Manual of Mental Disorders [DSM-5] criteria) compared to both M.I.N.I (specificity 0.44, 95% CI: 0.33–0.55) and clinical diagnoses (specificity 0.76, 95% CI: 0.67–0.85). The sensitivity of the CORE-DI was 0.61 (95% CI: 0.55–0.72) for ICD-10 criteria and 0.67 (95% CI: 0.57–0.77) for DSM-5 criteria. <b><i>Discussion/Conclusion:</i></b> The CORE-DI increased the specificity of the depression diagnosis substantially compared to clinical diagnoses and the diagnoses obtained by M.I.N.I. The results point to the usefulness of an elaborated and systematic assessment of the core symptoms in the examination of patients with depressive symptoms and thereby indicate a way for further development of specific diagnostic tools for depression in both clinical and research settings. However, it should be noted that the sensitivity of the CORE-DI was modest, and the psychometric properties of the CORE-DI might be different in other settings with higher or lower prevalence or severity of depressive symptoms.
DOI: 10.6084/m9.figshare.28844306.v1
title: Pre/Post Test Data

description: SAFETE manuscript dataset for pre/post test and survey.
DOI: 10.6084/m9.figshare.21252192.v1
title: Supplementary Data 1 NMR and HRMS.docx

description: The 1H-, 13C- and 19F-NMR as well as HRMS spectra of a series of 5-substituted hexahydro-1H-1,4-methanocarbazoles
DOI: 10.6084/m9.figshare.28373921.v1
title: Supplementary Table 1 & 2.pdf

description: Supplementary data for the study: Ouellette A, Do C, Cohn Guthrie S, Lam YW, Mahendroo M, Nallasamy S<b>.</b><b> </b>Lysyl oxidases are necessary for myometrial contractility and on-time parturition in mice.
DOI: 10.17605/osf.io/x2d43
title: On the temporal aspect of post-consonantal F0 perturbation in English voicing perception

description: The results in Experiment 3 suggested that the falling time of the F0 contour can affect English listeners' identification of stop voicing. Specifically, listeners identified Step 5, of which the F0 starts at 280 Hz and falls to the baseline F0 after 50% of the total vowel duration, more often as voiceless in noise than Step 4, of which the F0 starts at 280 Hz and falls to the baseline F0 after 25% of the total vowel duration. This experiment (i.e., Experiment 4) aims to confirm and elucidate this timing effect. We created four F0 contours by fixing the onset F0 and varying the slopes. Two slopes in this experiment, Slope 4′ and Slope 5′, are the same as Steps 4 and 5 at the midpoint VOT value in Experiment 3, respectively. One other slope is the midpoint between Slope 4′ and Slope 5′. The last one is larger than Slope 4′, and its difference from Slope 4′ is the same as half of the difference between Slope 4′ and Slope 5′. Please see the Praat script for the details of stimuli construction.
DOI: 10.6084/m9.figshare.1305596.v5
title: APC data for 25 UK higher education institutions - 2014

description: This spreadsheet contains details of 6,943 article processing charges (APCs) paid by 25 UK higher education institutions during 2014. The data is being collected as part of Jisc's APC data collection project to address the Total Cost of Ownership of scholarly communication (https://www.jisc-collections.ac.uk/Jisc-Monitor/APC-data-collection/) and has been released with permission of the institutions involved.
DOI: 10.6084/m9.figshare.26411125.v3
title: Lake Kasumigaura circulation model 2020

description: SUNTANS model case used for Masunaga et al. (2024) submitted to Water Resource Research. The data set includes all forcing/input files used in the model.
DOI: 10.17028/rd.lboro.20146499.v1
title: Prey capture by the non-native carnivorous pitcher plant Sarracenia purpurea across sites in the Britain and Ireland.

description: https://doi.org/10.17028/rd.lboro.20146499 <b><i>©</i></b><i>the authors, CC-BY NC</i>Supplementary files for article Prey capture by the non-native carnivorous pitcher plant <i>Sarracenia purpurea</i> across sites in the Britain and Ireland. Includes: site locations, prey capture per pitcher, synthesis of prey capture from exsiting studies globally.The carnivorous pitcher plant Sarracenia purpurea is native to North America, but has been introduced into Europe, where it is now widespread. Understanding of how this species functions in its non-native range is limited. We measured pitcher morphology and prey capture by S. purpurea in its non-native range in Britain and Ireland. Pitchers were removed from different plants at each of six bogs covering the species range in Britain and Ireland (n = 10 pitchers per site). For each pitcher we counted and identified every prey item and took measurements of morphology. We also compiled prey capture data for existing studies in Europe and North America. Prey capture characteristics varied between sites in Britain and Ireland. The amount of prey captured varied 20-fold between sites and was partially explained by differences in pitcher size; larger pitchers caught more prey. The primary prey was Formicidae, Diptera and Coleoptera. At the rank of order, prey composition varied between bogs, some contained mainly Formicidae, some mainly Diptera and some a mix. Prey capture was less evenly distributed at some bogs compared to others, suggesting more specialization. There was no overall difference in prey capture (composition or evenness) at the rank of order between plants in Europe compared to those in North America. At the rank of species, prey capture varied between populations even within the same order. This study demonstrates a large amount of variability between sites in prey capture characteristics. This may reflect different site characteristics and/or plant strategies, which will likely impact plant function, and may impact the inquiline community. In terms of prey capture at the rank of order, S. purpurea functions identically in its non-native range. This supports its use as a model system in a natural experiment for understanding food webs.
DOI: 10.17632/kfc3jyggs7
title: Data for: Working Memory Develops at a Similar Rate Across Diverse Stimuli

description: Data for Working Memory Develops at a Similar Rate Across Diverse Stimuli - The data files include the raw data (dat_all) and collapsed data per participant (dat_..._Unstacked). The data files include pre-analyses of the span using the all-or-nothing unit scoring system or the partial credit unit scoring system. - The ratios between the different types of spans are pre-calculated in dat_..._Unstacked, as well as the z-scores. - The column names are self-explanatory.