cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.825634.v2
title: Sound Finder: a new software approach for localizing animals recorded with a microphone array

description: Acoustic localization is a powerful technique for monitoring the positions, movements and behaviours of terrestrial animals. However, its prevalence in biological studies has been constrained by hardware and software that are custom-built, expensive and difficult to use. We recently helped to relieve the hardware constraint by describing a microphone array that is affordable, portable, easy to use and commercially available. Here, we help to relieve the software constraint by developing an acoustic localization program called “Sound Finder”, which is easy to use, freely available and accurate for a variety of animals and recording conditions. It runs in the free software environment R, and in spreadsheet programs such as Microsoft Excel and the open-source software LibreOffice. In this study, we describe how Sound Finder functions, and then test its accuracy by localizing natural sounds that were broadcast through loudspeakers and re-recorded with microphone arrays. We quantify Sound Finder's accuracy by comparing its location estimates with known loudspeaker locations and with output from other localization approaches. We show that Sound Finder generates accurate location estimates for a variety of animal sounds, microphone array configurations and environmental conditions. Furthermore, Sound Finder generates an error value that allows the user to assess its accuracy. In conclusion, Sound Finder provides accurate estimates of a vocalizing animal's location. It is easy to use, requires only widespread and affordable software and is freely available in a standard form as Supplementary material to this article.
DOI: 10.17632/29gycgdhc2
title: Spatial heterogeneity of sedimentary organic carbon accumulation and degradation along the Arctic continental margins

description: The warming climate has led to the translocation of a large amount of terrestrial organic carbon (TerrOC) from permafrost into the Arctic Ocean through river transport and coastal erosion. The fate of sedimentary organic carbon (SOC) varies dramatically and thus affects climate-carbon feedback. We analyzed the spatial heterogeneity of SOC sources and degradation along the East Siberian Arctic Shelf (ESAS) with bulk parameters (total organic carbon, δ13C) and a biomarker (lignin) for comparison of the spatial heterogeneity of TerrOC degradation between the broad ESAS and the narrow Amerasian continental shelf. The results show that the relative importance of river runoff, coastal erosion, and primary productivity causes alongshore variations in organic carbon (OC) sources within the ESAS, highlighting the effects of land-based inputs and ocean currents. Meanwhile, the variations of OC sources show gradually diminishing terrestrial signals in the seaward direction. The simultaneous offshore decrease in OC loadings and increase in lignin degradation indicate that the degradation of TerrOC within a water depth of 100 m is a key mechanism driving the cross-shelf loss of OC in the ESAS. Compared to the broad ESAS, the inconspicuous variations in Λ8/SSA and 3,5-Bd/V across the narrow Amerasian margin suggest that the width of the continental shelf is vital in determining the fate of TerrOC, despite greater levels of recalcitrant petrogenic OC in the Beaufort Sea. In general, the insights have profound implications for evaluating the coastal remobilization and preservation of SOC and its climate-carbon feedback across diverse pan-Arctic continental shelves.
DOI: 10.17632/9nmgzttxhm
title: International Drug Dictionary (IDD)

description: This drug proprietary names dictionary was collected from the official websites of drug regulatory agencies of 44 countries in addition to the European Medicines Agency (EMA). The DRUGBANK vocabulary has been used to add more synonyms and alternative drug names. Then all drug names were merged, deduplicated, and mapped to the active ingredient level of RxNorm vocabulary. This dictionary has not been manually reviewed, therefore can not be used for clinical decisions.
DOI: 10.17632/b6ycptcycn
title: Bibliometric Network Mapping of Farm Accounting Studies Using a Comprehensive Dataset

description: This data article aims to analyze the intellectual structure of farm accounting studies by examining bibliometric features. A dataset comprising 190 documents from the ISI Database within the farm accounting field was utilized. It delved into various aspects including the yearly publication and citation count concerning agricultural accounting, predominant research areas, keyword co-occurrence, bibliographic coupling among sources and documents, as well as co-citation patterns of referenced materials. Bibliometric network mapping techniques were employed for the analysis of the data. The analysis was conducted using VOSviewer, a scientific mapping analysis tool, and employed the bibliometric analysis method with the ISI (Web of Science) database, which contains scientific journals, books, and conference proceedings and is well-established and widely recognized.
DOI: 10.17632/bb9htnsw6k
title: Does one belt one road initiative inhibit the formation of zombie firms

description: This study selects the data of China's A-share listed firms from 2012 to 2017 based on the proposal of the OBOR initiative. The financial data in this study are from the CSMAR and WIND databases.
DOI: 10.6084/m9.figshare.5146888.v2
title: Analytical solution for solute concentration in the inner and outer domains of the eroding vascular graft. from Degradation and erosion mechanisms of bioresorbable porous acellular vascular grafts: an <i>in</i> <i>vitro</i> investigation.

description: This supplemental material provide details of the derivation of the analytical solution for solute (eroded PGS) concentration as a function of time and radial position resulting from diffusion of eroding PGS from the inner and outer surfaces of the graft.
DOI: 10.17632/84rhtfz9n2
title: IDEA: Artificial neural network models for 11-species air properties at thermochemical equilibrium

description: Accurate prediction of high-temperature air properties is essential in many aerodynamic applications under hypersonic flight conditions. Various curve-fit models using piecewise polynomial fittings have been commonly adopted to approximate equilibrium air properties at high temperatures. Several shortcomings including low accuracy, lack of diversity, and discontinuity at curve-fit boundary still remain, causing numerical troubles in computational procedures. To address the issues, IDEA, an open-source C++ library that enables fast and accurate computations of the equilibrium air properties and their first and second derivatives, is newly developed based on the artificial neural network (ANN).

IDEA, which stands for the Infinitely Differentiable Equilibrium Air, predicts thermodynamic and transport properties of 11-species (N2, O2 , N, O, NO, NO+, N+, O+, N++, O++, and e-) thermochemical equilibrium air at the temperature range up to 25,000 K and density range from 10^-7 to 10^3 amagats. The training data is constructed from the kinetic molecular theory using the equilibrium constant method with the rigid-rotor, harmonic-oscillator model. As the name suggests, IDEA's models are infinitely differentiable in the application range; thus, they have enhanced convergence in computational fluid dynamics (CFD) when using gradient-based methods. Using a newly developed training process based on the Levenberg–Marquardt algorithm with weighted mean squared error loss, IDEA provides more accurate and diverse property models with much fewer parameters than previous piecewise polynomial fitting models. In addition, the proposed training method offers easy extensions to various property models with different species data. IDEA provides C interfaces that can be used for programs in various computer languages, such as C/C++, Fortran, Python, and MATLAB. IDEA's modeling routines are thread-safe, so they can be safely used for parallel programs without performance loss. The accuracy and enhanced convergence of IDEA is demonstrated via several high-speed flow computations
DOI: 10.6084/m9.figshare.14229986
title: Metadata record for the manuscript: Anti-tumor effects of an ID antagonist with no observed acquired resistance

description: <b>Summary</b> This metadata record provides details of the data supporting the claims of the related manuscript: “Anti-tumor effects of an ID antagonist with no observed acquired resistance”. The related study aimed to show that AGX51 treatment of cancer cell lines impairs cell growth and viability that results from an increase in ROS production upon ID degradation. (ID proteins are helix-loop-helix (HLH) transcriptional regulators frequently overexpressed in cancer. ID proteins inhibit basic-HLH transcription factors often blocking differentiation and sustaining proliferation. The small-molecule, AGX51, targets ID proteins for degradation and impairs ocular neovascularisation in mouse models.) Type of data: LC-MS/MS and whole proteome analysis; flow cytometry Subject of data: Eukaryotic cell lines; <i>Mus musculus</i> Sample size: 3 replicates per experimental condition for in vitro experiments; 5 mice per group in each mouse experiment. Sample sizes determined based on an expected large effect size. Population characteristics: Weight measurements and standard blood analyses were carried out on 8-12 week-old male CD1 mice. Orthotopic mammary fat pad tumors were generated in 8-12 week-old, female athymic nu/nu mice (Simonsen Laboratories). Lung metastases were generated by injecting 6-8 week-old, female, Balb/c mice (Taconic). Spontaneous colon tumors were induced by treating 30, 4-week old male A/J mice (Jackson Laboratory). <b>Data access</b> The proteomics data of anti-tumour effects of an ID antagonist with no observed acquired resistance are openly available in the PRIDE Archive via the following accession: https://identifiers.org/pride.project:PXD024593. The raw data underlying the following figures are openly available as part of this data record: 1E, 2A, 3B,C,D, 4A,E, 5A,B,F,G 6B, S1A,D,F,G, S2E,I,J S5A,B S6, S7A, S8C. A comprehensive list of which file is associated with each figure is included in the Excel spreadsheet ‘Wojnarowicz_et_al_underlying_data_files_list.xlsx’. All uncropped Western Blots are in the Supplementary Information section of the related article. <b>Corresponding author(s) for this study</b> Robert Benezra. Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY. benezrar@mskcc.org. <br> <b>Ethics </b> Animal studies were carried out in accordance with institutional regulations (IACUC protocol 06-10-025).
DOI: 10.6084/m9.figshare.23713482.v1
title: Supporting information for "Associations between gut microbiota diversity and a host fitness proxy in a naturalistic experiment using threespine stickleback fish"

description: R scripts and data files used for analyzing bacterial community composition of gut samples from threespine stickleback fish (<i>Gasterosteus aculeatus</i>) reared in experimental ponds at the University of British Columbia, Canada. The files are supporting information for our manuscript titled: "Associations between gut microbiota diversity and a host fitness proxy in a naturalistic experiment using threespine stickleback fish".
DOI: 10.60893/figshare.jcp.27682638.v1
title: Supplementary Data File

description: Cartesian coordinates and energetics for all trimers studied, at each level of theory
DOI: 10.17632/2gsj66xcx6
title: Raw data

description: Online travel reviews
DOI: 10.17632/9s4h2msbbd
title: Data for Chemodiversity mechanisms of aerosol acidity: Effects of seasonal pattern and chemical species

description: The dataset is monitored and calculated, relating to figures 1-7 of this study.
DOI: 10.17632/kgd3bbdwbf
title: Journal of Islamic Education; No. 34

description: The journal is set to publish original articles on a wide range of issues including;

 Philosophy of Islamic education;
 Schools and approaches to Islamic education;
 Educational jurisprudence (Fiqh);
 Foundations, principles and methodology of Islamic education;
 History of Islamic education;
 Educational thoughts, views and ideas of Muslim scholars;
 Educational sciences such as educational management, curriculum planning and educational psychology with an Islamic approach;
 Comparative studies;
 The areas and dimensions of education in Islam include religious education, devotional education, moral education, sexual education, political education, and so on;
 Methodology of research in Islamic education;
 Examining different aspects of formal education with Islamic perspective;
DOI: 10.6084/m9.figshare.12363869.v1
title: SourceData_fig s9a.xlsx

description: Data from Supplementary figure 9a. Description is inside, in tab 'columns_description'.
DOI: 10.6084/m9.figshare.14784678.v2
title: Vulliard2021_BioProfilingJl

description: # High-content imaging chemical screen in U-2-OS<br><br>This dataset is described in the manuscript untitled "BioProfiling.jl: Profiling biological perturbations with high-content imaging in single cells and heterogeneous populations" by Vulliard _et al_ (DOI: [10.1101/2021.06.18.448961](https://doi.org/10.1101/2021.06.18.448961).<br>The following files are made available:<br><br>* `README.md`: description of the dataset.<br>* `750CellsPerWell.zip`: raw fluorescent images (TIFF) for a 384-well drug plate seeded with 750 cells per well.<br>* `1500CellsPerWell.zip`: raw fluorescent images (TIFF) for a 384-well drug plate seeded with 1500 cells per well.<br>* `Batch_data_u2os_drug.cpproj`: CellProfiler 3.1.8 pipeline used to analyse the images.<br>* `data.zip`: morphological measurements from CellProfiler per cell for each plate and plate layout. Necessary input to reproduce our [example analyses](https://github.com/menchelab/BioProfilingNotebooks).* `IntermediateResults.zip`: files generated in the [example analyses](https://github.com/menchelab/BioProfilingNotebooks).that are not required but helpful to avoid rerunning all scripts in order.<br><br>The preparation of the drug plates is described more precisely in the manuscript.
DOI: 10.6084/m9.figshare.22191286.v2
title: Analyzed interview transcript

description: This project provides the interview script which has analyzed and categorized to five emotional geography framework.
DOI: 10.6084/m9.figshare.25539805.v1
title: GrainSpace MAIZE_M600_TRAIN training set

description: grainspace maize training set
DOI: 10.6084/m9.figshare.8082455.v2
title: amphipoda_dataset.xls

description: Dataset concerning the abundance of sampled amphipods in three <i>Posidonia oceanica</i> meadows from the central Tyrrhenian Sea (Mediterranean Sea), characterised by different habitat features. Alongside the abundance, the dataset contains a field named BS (body size, taken as the maximum body length measured from anterior margin of the head to the posterior end of the telson, in mm) representing the average maximum length between male and female specimens.
DOI: 10.6084/m9.figshare.28982852.v1
title: Microbial heterotrophic functional responses to natural salinity fluctuations in hypersaline waters

description: Using extracellular enzyme activities as a main functional indicator, we tried to understand if heterotrophic microbial communities adapted to hypersaline conditions are fully functional despite the stressors they must face. Moreover, we studied how natural salinity fluctuations may affect this functioning. Thus has been done by sampling 4 hypersaline lakes in different moments, obtaining a natural hypersaline gradient. The study include physicochemical water parameters, extracellular enzyme activities, life to dead prokaryote ratio, photosynthetic pigments content, DOM quality and quantity indices, DOC, and TN.
DOI: 10.17632/g3kp7yt2m5
title: Optimal electric vehicle charging station allocation

description: Despite the environmental and economic benefits of Electric Vehicles (EVs), distribution network operators will need to understand the location where the charging infrastructure will be placed to ensure EV users’ needs are met. In this sense, this work proposes a methodology to define the optimal location of EV semi-fast charging stations (CS) at a neighborhood level, through a multi-objective approach. It applies a hierarchical clustering method to define CS service zones, considering technical and mobility aspects. Besides, it considers uncertainties related to the EV load profile to determine the CS capacity, based on the user’s charging behavior. A Pareto Frontier method is deployed to support the decision-making process on CS optimal location, considering utility and EV users’ preferences. The results indicate that the best CS locations for mid-term EV penetration can also fit into long-term planning, with higher EV charging demand. Thus, these locations would be good candidates for the power utility to make initial investments, in both planning horizons. A real distribution system case is used to demonstrate the applicability of the results.
DOI: 10.17632/m7ndn58sv6
title: DATASET for: "Carotid Ultrasound Boundary Study (CUBS): Technical considerations on an open multi-center analysis of computerized measurement systems for intima-media thickness measurement on common carotid artery longitudinal B-mode ultrasound scans"

description: Here we provide the entire dataset (500 images, conversion factors for images, 3 manual segmentations, 7 computerized segmentations) for the article "Carotid Ultrasound Boundary Study (CUBS): Technical considerations on an open multi-center analysis of computerized measurement systems for intima-media thickness measurement on common carotid artery longitudinal B-mode ultrasound scans" published in Computers in Biology and Medicine, 2022 (DOI: https://doi.org/10.1016/j.compbiomed.2022.105333).

Any results obtained using the published dataset MUST cite the original research article (Meiburger K.M. et al, Carotid Ultrasound Boundary Study (CUBS): Technical considerations on an open multi-center analysis of computerized measurement systems for intima-media thickness measurement on common carotid artery longitudinal B-mode ultrasound scans", Computers in Biology and Medicine, 2022, DOI: https://doi.org/10.1016/j.compbiomed.2022.105333. See the ReadMe file "readme.txt" for all details. 

Abstract:
"After publishing an in-depth study that analyzed the ability of computerized methods to assist or replace human experts in obtaining carotid intima-media thickness (CIMT) measurements leading to correct therapeutic decisions, here the same consortium joined to present technical outlooks on computerized CIMT measurement systems and provide considerations for the community regarding the development and comparison of these methods, including considerations to encourage the standardization of computerized CIMT measurements and results presentation. A multi-center database of 500 images was collected, upon which three manual segmentations and seven computerized methods were employed to measure the CIMT, including traditional methods based on dynamic programming, deformable models, the first order absolute moment, anisotropic Gaussian derivative filters and deep learning-based image processing approaches based on Unet convolutional neural networks. An inter- and intra-analyst variability analysis was conducted and segmentation results were analyzed by dividing the database based on carotid morphology, image signal-to-noise ratio, and research center. The computerized methods’ obtained CIMT absolute bias results that were comparable with studies in literature and they generally were similar and often better than the observed inter- and intra-analyst variability. Several computerized methods showed promising segmentation results, including one deep learning method (CIMT absolute bias = 106 ± 89 μm vs. 160 ± 140 μm intra-analyst variability) and three other traditional image processing methods (CIMT absolute bias = 139 ± 119 μm, 143 ± 118 μm and 139 ± 136 μm). The entire database used has been made publicly available for the community to facilitate future studies and to encourage an open comparison and technical analysis."
DOI: 10.4121/20324832.v1
title: User preferences for local P2P electricity markets - Dataset

description: User preferences for local electricity markets - Dataset <br> This is the dataset containing the results of a survey conducted among residential users in the Netherlands on their preferences for peer-to-peer electricity trading in local markets. <br> The survey is based on Choice-Based Conjoint (CBC) methodlogy. The data was collected online between May and June 2021. <br> The survey was conducted as part of the research project P2P TALES - "Enabling peer-to-peer energy trading by leveraging prosumer analytics" with project number 647.003.003, partly supported by the Netherlands Organization for Scientific Research (NWO).
DOI: 10.6084/m9.figshare.10120685.v3
title: The Twitter Parliamentarian Database

description: <br>This is the Twitter Parliamentarian Database: a database consisting of parliamentarian names, parties and twitter ids from the following countries: Austria, Belgium, France, Denmark, Spain, Finland, Germany, Greece, Italy, Malta, Poland, Netherlands, United Kingdom, Ireland, Sweden, New Zealand, Turkey, United States, Canada, Australia, Iceland, Norway, Switzerland, Luxembourg, Latvia and Slovenia. In addition, the database includes the European Parliament.The tweet ids from the politicans' tweets have been collected from September 2017 - 31 October 2019 (<i>all_tweet_ids.csv</i>). In compliance with Twitter's policy, we only store tweet ids, which can be re-hydrated into full tweets using existing tools. More information on how to use the database can be found in the <i>readme.txt.</i>It is recommended that you use the .csv files to work with the data, rather than the SQL tables. Information on the relations in the SQL database can be found in the <i>Database codebook.pdf.</i><i>Update:</i>The tweet ids for 2021 have been added as <i>'2021.csv'</i><i>Update #2:</i>The tweet ids for 2020 have been added as<i> '2020.csv'</i>The last party table has been added as<i> 'parties_2021_04_28.csv'</i>The last members table has been added as <i>'members_2021_04_28.csv'</i><br><br>