cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.y693rx
title: Occurrence Download

description: A dataset containing 49488 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ukraine",
 "Geometry POLYGON((29.40127 51.8961,27.41518 51.87327,24.26482 52.2157,23.35167 51.80478,22.30155 49.31646,21.91346 48.67725,21.98195 47.90108,24.28765 47.39885,25.90848 47.53582,27.62597 47.83615,27.8086 45.16519,28.21951 43.84113,29.90884 43.74981,32.92222 42.88232,36.20955 42.47141,37.26824 44.26061,37.40522 45.42488,37.99876 46.74894,38.72928 47.29683,40.07617 47.66209,40.48709 49.62535,36.44641 50.90376,34.75709 52.02237,33.52434 52.75288,30.4653 52.34197,29.78043 52.13651,29.40127 51.8961))",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 2000-2009"
 ]
}

 The dataset includes 49488 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025757-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/5f87d042-ccb3-4a23-b492-254d2ae2b406
title: Data for publication: Metagenomic analysis of antibiotic resistance across the wastewater process

description: The repository contains data used in the study: Metagenomic analysis of antibiotic resistance across the wastewater process. Publicly available metagenomic data was used in this study to represent the wastewater treatment plant process. Data was used according to descriptions by the previous studies that generated the data. This was labelled as Upstream, Influent, Effluent, Activated sludge, Effluent and Downstream. Data was used to analyse the microbiome, resistome and mobilome. Bioprojects and run numbers can be found in the metadata provided in the publication.
DOI: 10.4121/5f87d042-ccb3-4a23-b492-254d2ae2b406.v1
title: Data for publication: Metagenomic analysis of antibiotic resistance across the wastewater process

description: The repository contains data used in the study: Metagenomic analysis of antibiotic resistance across the wastewater process. Publicly available metagenomic data was used in this study to represent the wastewater treatment plant process. Data was used according to descriptions by the previous studies that generated the data. This was labelled as Upstream, Influent, Effluent, Activated sludge, Effluent and Downstream. Data was used to analyse the microbiome, resistome and mobilome. Bioprojects and run numbers can be found in the metadata provided in the publication.
DOI: 10.15468/dl.8h3dj2
title: Occurrence Download

description: A dataset containing 197 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ibacus ciliatus (Von Siebold, 1824)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 197 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025760-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25904170
title: Data for comparsion of MCCA and PLUS models

description: The file contains the 30m original data used as the baseline as well as the initial input data and simulation results used for MCCA and PLUS at different resolutions.
DOI: 10.4121/8b59c203-747b-4e9c-a76e-7ae57b349671
title: Data for publication: A Metagenomic Study of Antibiotic Resistance Across Diverse Soil Types and Geographical Locations

description: Data used in the publication: A Metagenomic Study of Antibiotic Resistance Across Diverse Soil Types and Geographical Locations. Publicly available metagenomic data representing different soil types i.e. natural, urban, rhizosphere and rural soils from various countries. Data was used to identify the microbiome, resistome and mobilome. Bioprojects and run numbers can be found in the metadata provided in the publication.<br>
DOI: 10.4121/8b59c203-747b-4e9c-a76e-7ae57b349671.v1
title: Data for publication: A Metagenomic Study of Antibiotic Resistance Across Diverse Soil Types and Geographical Locations

description: Data used in the publication: A Metagenomic Study of Antibiotic Resistance Across Diverse Soil Types and Geographical Locations. Publicly available metagenomic data representing different soil types i.e. natural, urban, rhizosphere and rural soils from various countries. Data was used to identify the microbiome, resistome and mobilome. Bioprojects and run numbers can be found in the metadata provided in the publication.<br>
DOI: 10.15468/dl.bdavzk
title: Occurrence Download

description: A dataset containing 438 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Machaeropterus eckelberryi Lane, Kratter & O'Neill, 2017"
 ]
}

 The dataset includes 438 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025762-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14327083
title: Data_for_figures_20241209
DOI: 10.5281/zenodo.14327084
title: Data_for_figures_20241209
DOI: 10.15468/dl.9cfy94
title: Occurrence Download

description: A dataset containing 36013 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 1901-1920"
 ]
}

 The dataset includes 36013 records from 178 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025759-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g6uxrf
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Parribacus antarcticus (Lund, 1793)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 12 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025763-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/b7d5d108-4832-4f22-a11d-7c8f89ebdebf
title: Data for publication: Portable In-Field DNA Sequencing for Rapid Detection of Pathogens and Antimicrobial Resistance: A Proof-of-Concept Study

description: Data used/generated in the publication: Portable In-Field DNA Sequencing for Rapid Detection of Pathogens and Antimicrobial Resistance: A Proof-of-Concept Study.Metagenomic data was generated using nanopore sequencing from lake water, retail meat products and sludge using a modified and unmodified DNA extraction protocol. Data has been uploaded to a publicly available repository (ncbi) under the accession number PRJNA1168083.
DOI: 10.4121/b7d5d108-4832-4f22-a11d-7c8f89ebdebf.v1
title: Data for publication: Portable In-Field DNA Sequencing for Rapid Detection of Pathogens and Antimicrobial Resistance: A Proof-of-Concept Study

description: Data used/generated in the publication: Portable In-Field DNA Sequencing for Rapid Detection of Pathogens and Antimicrobial Resistance: A Proof-of-Concept Study.Metagenomic data was generated using nanopore sequencing from lake water, retail meat products and sludge using a modified and unmodified DNA extraction protocol. Data has been uploaded to a publicly available repository (ncbi) under the accession number PRJNA1168083.
DOI: 10.15468/dl.debkxn
title: Occurrence Download

description: A dataset containing 86269 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Turdus amaurochalinus Cabanis, 1850",
 "Year 2010-2020"
 ]
}

 The dataset includes 86269 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025761-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/c9ed9bd4-23d1-4760-95de-141414a06ac3
title: Data used in publication: A comparative metagenomic analysis of antibiotic resistance in the fecal microbiome of pigs raised with and without antibiotics

description: Data used in publication: A comparative metagenomic analysis of antibiotic resistance in the fecal microbiome of pigs raised with and without antibiotics. Metagenomic data was obtained from a public database representing the fecal microbiome of pigs that were raised with and without antibiotics. Metagenomic data was used to identify the microbiome, resistome and mobilome. Bioprojects and run numbers can be found in the metadata provided in the publication.
DOI: 10.4121/c9ed9bd4-23d1-4760-95de-141414a06ac3.v1
title: Data used in publication: A comparative metagenomic analysis of antibiotic resistance in the fecal microbiome of pigs raised with and without antibiotics

description: Data used in publication: A comparative metagenomic analysis of antibiotic resistance in the fecal microbiome of pigs raised with and without antibiotics. Metagenomic data was obtained from a public database representing the fecal microbiome of pigs that were raised with and without antibiotics. Metagenomic data was used to identify the microbiome, resistome and mobilome. Bioprojects and run numbers can be found in the metadata provided in the publication.
DOI: 10.15468/dl.gd5nz5
title: Occurrence Download

description: A dataset containing 495702 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "GadmGid is Z01.14_1"
 ]
}

 The dataset includes 495702 records from 236 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025735-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xq3fyb
title: Occurrence Download

description: A dataset containing 1204 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cerorhinca monocerata (Pallas, 1811)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1204 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025764-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r8xkrz
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alca monocerata Pallas, 1811",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025765-241126133413365/datasets/export for details.
DOI: 10.15468/dl.uu93n3
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spisula sachalinensis (Schrenck, 1862)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 106 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025768-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.35cpxb
title: Occurrence Download

description: A dataset containing 215979 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "GadmGid is Z01.14.13_1",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 215979 records from 116 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025741-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hv3xdb
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Espeletia chardonii A.C.Sm."
 ]
}

 The dataset includes 106 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025770-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4jubeb
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pseudocardium sachalinense",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 31 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025771-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.79q939
title: Occurrence Download

description: A dataset containing 31166 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Insect specimens of Toyama Science Museum"
 ]
}

 The dataset includes 31166 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025772-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g6ve98
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spisula sibyllae (Valenciennes, 1858)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 70 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025776-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ppsk6
title: Occurrence Download

description: A dataset containing 25774 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Botanical Collections of the Åbo Akademi (TUR-A)",
 "Country is Sweden"
 ]
}

 The dataset includes 25774 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025774-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mp28jv
title: Occurrence Download

description: A dataset containing 35748 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Vascular Plant Herbarium, Oslo (O) UiO",
 "Country is Sweden"
 ]
}

 The dataset includes 35748 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025773-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14327172
title: Biotic and abiotic factors regulate iron and manganese contents in soil during subalpine vegetation succession
DOI: 10.5281/zenodo.14327173
title: Biotic and abiotic factors regulate iron and manganese contents in soil during subalpine vegetation succession
DOI: 10.15468/dl.hcp4bx
title: Occurrence Download

description: A dataset containing 117893 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Turdus leucomelas Vieillot, 1818",
 "Year 2010-2020"
 ]
}

 The dataset includes 117893 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025758-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ybwjt6
title: Occurrence Download

description: A dataset containing 615 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Espeletia neriifolia (Bonpl. ex Humb.) Sch.Bip ex Wedd."
 ]
}

 The dataset includes 615 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025777-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s3nqzs
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cetorhinus maximus (Gunnerus, 1765)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025778-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ja7295
title: Occurrence Download

description: A dataset containing 22361 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Vascular Plant Herbarium, UiB",
 "Country is Sweden"
 ]
}

 The dataset includes 22361 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025779-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4x24ew
title: Occurrence Download

description: A dataset containing 192 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myrmoderus eowilsoni Moncrieff, Johnson, O, Lane, Beck, Angulo & Fagan, 2017"
 ]
}

 The dataset includes 192 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025781-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pjwjbu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Squalus maximus Gunnerus, 1765",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025782-241126133413365/datasets/export for details.
DOI: 10.15468/dl.hnsj4r
title: Occurrence Download

description: A dataset containing 36511 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Vascular Plant Herbarium: Herbarium Generale",
 "Country is Sweden"
 ]
}

 The dataset includes 36511 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025783-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25529484
title: Novel protocol for multiple-dose oral administration of the L-type Ca<sup>2+</sup> channel blocker isradipine in mice: A dose-finding pharmacokinetic study

description: Studies in genetically modified animals and human genetics have recently provided new insight into the role of voltage-gated L-type Ca<sup>2+</sup> channels in human disease. Therefore, the inhibition of L-type Ca<sup>2+</sup> channels in vivo in wildtype and mutant mice by potent dihydropyridine (DHP) Ca<sup>2+</sup> channel blockers serves as an important pharmacological tool. These drugs have a short plasma half-life in humans and especially in rodents and show high first-pass metabolism upon oral application. In the vast majority of in vivo studies, they have therefore been delivered through parenteral routes, mostly subcutaneously or intraperitoneally. High peak plasma concentrations of DHPs cause side effects, evident as DHP-induced aversive behaviors confounding the interpretation of behavioral readouts. Nevertheless, pharmacokinetic data measuring the exposure achieved with these applications are sparse. Moreover, parenteral injections require animal handling and can be associated with pain, discomfort and stress which could influence a variety of physiological processes, behavioral and other functional readouts. Here, we describe a noninvasive oral application of the DHP isradipine by training mice to quickly consume small volumes of flavored yogurt that can serve as drug vehicle. This procedure does not require animal handling, allows repeated drug application over several days and reproducibly achieves peak plasma concentrations over a wide range previously shown to be well-tolerated in humans. This protocol should facilitate ongoing nonclinical studies in mice exploring new indications for DHP Ca<sup>2+</sup> channel blockers.
DOI: 10.6084/m9.figshare.25529484.v1
title: Novel protocol for multiple-dose oral administration of the L-type Ca<sup>2+</sup> channel blocker isradipine in mice: A dose-finding pharmacokinetic study

description: Studies in genetically modified animals and human genetics have recently provided new insight into the role of voltage-gated L-type Ca<sup>2+</sup> channels in human disease. Therefore, the inhibition of L-type Ca<sup>2+</sup> channels in vivo in wildtype and mutant mice by potent dihydropyridine (DHP) Ca<sup>2+</sup> channel blockers serves as an important pharmacological tool. These drugs have a short plasma half-life in humans and especially in rodents and show high first-pass metabolism upon oral application. In the vast majority of in vivo studies, they have therefore been delivered through parenteral routes, mostly subcutaneously or intraperitoneally. High peak plasma concentrations of DHPs cause side effects, evident as DHP-induced aversive behaviors confounding the interpretation of behavioral readouts. Nevertheless, pharmacokinetic data measuring the exposure achieved with these applications are sparse. Moreover, parenteral injections require animal handling and can be associated with pain, discomfort and stress which could influence a variety of physiological processes, behavioral and other functional readouts. Here, we describe a noninvasive oral application of the DHP isradipine by training mice to quickly consume small volumes of flavored yogurt that can serve as drug vehicle. This procedure does not require animal handling, allows repeated drug application over several days and reproducibly achieves peak plasma concentrations over a wide range previously shown to be well-tolerated in humans. This protocol should facilitate ongoing nonclinical studies in mice exploring new indications for DHP Ca<sup>2+</sup> channel blockers.