cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15151/esrf-es-649328544
title: Structure, redox and luminecence properties of hexanuclear Ce/Zr clusters in new bimetallic MOFs with various connectivities

description: Structure and exact stoichiometry of the hexanuclear {CexZr6-xO4(OH)4} cornerstones in a series of novel bimetallic Ce/Zr MOFs with different linkers and Ce/Zr ratios will be determined by Ce and Zr K-edge EXAFS spectroscopy. Ce L3-edge XANES spectroscopy will be used to correlate reducibility of Ce centers with Ce content, connectivity of the framework and their luminescence properties for molecular sensing.
DOI: 10.15151/esrf-es-649329928
title: Charcterization of osteosarcoma resected human tissue by using high resolution X ray microdiffraction

description: The goal of this proposal is to assess the bone quality of osteosarcoma (OS) resected human tissue, by using xray scanning micro-diffraction at a spatial resolution down to 1 micron. This will allow to visualise and evaluate the bone microarchitecture, bone mineral platelets and collagen fibrils of osteosarcoma tissue. The bone microarchitectures and bone quality of OS will be compared with the healthy control bone and with histological data of the same subject. Due to its rarity, osteosarcoma is still lacking a reliable and precise characterization of the bone quality morphology as well as microarchitecture information at the micron scale. The results of this proposal will help to tackle this gap and will get a better understanding of bone quality, microarchitecture changes in OS tissue.
DOI: 10.15151/esrf-es-670011307
title: Crystal structure of multiferroic KNi_1-xCo_xPO4 (x=0,0.1,0.2,0.3,0.4,0.5,1.0)

description: The proposal falls within the general research area of multifunctional multiferroic materials, which has received great attention in both fundamental research and practical applications. One promising class of multiferroics materials can be realized in the KNi_1-xCo_xPO4 family. In this regard, the origin of the series of temperature-induced phase transitions high temperatures are also poorly understood. Uncovering the crystal structure is crucial for understanding the mechanisms behind the magnetoelectric effect in the candidate material. Hence, we propose to use powder x-ray diffraction to determine if the high temperature phase transitions of the compound at various doping levels (x = 0, 0.1 ,0.2 ,0.3, 0.4, 0.5, 1.0) are accompanied by structural changes.
DOI: 10.15151/esrf-es-672035623
title: Dynamics of vesicles in dense pools studied by XPCS

description: We propose to study the dynamics of synaptic vesicles (SV) [1] and of artificial lipid vesicles in dense vesicle pools by XPCS. Pools are aggregates of vesicles which are clustered together by proteins causing an attractive interaction. We target in particular the short range (hindered) diffusion of vesicles which are believed to be at least partially arrested in the pool. Center-of-mass movements as well as relaxation of deformations and viscoelastic strain fields in the pool are expected to contribute to the XPCS signal, and will be disentangled via the q-dependence and by varying the sample setup (density, SV versus simple vesicles, protein concentration etc.). Here we extend our previous SAXS study of SV pools (SC-5112) by X-ray photon correlation spectroscopy (XPCS) using highly brilliant ESRF undulator radiation. We want to understand how a vesicle diffuses within a dense cluster which is formed by gel-like interaction with specific proteins, notably synapsin.
DOI: 10.15151/esrf-es-648317632
title: Determination of the mechanisms of X-ray nanopattering in TiO2

description: Based on the positive outcomes of our previous experiments carried out on the superconducting oxide Bi2SrCa2Cu2O8+δ (experiment MA-4100), and on the positive results of our recent experiments MA-3506 and MA-4361 performed on TiO2, we propose to investigate the mechanism of defect formation in this material in order to get a systematic control of the experimental parameters, as needed for fine tuning of the recently developed direct-write X-ray nano-patterning (XNP) technique.
DOI: 10.15151/esrf-es-649330107
title: Misdirection of axonal outgrowth of nerve fibers after nerve injury and repair/reconstruction

description: Peripheral nerve injuries are common and lead to life-long disability for affected individuals in spite of surgical treatments. Yet an unsolved clinical problem is misdirected axonal outgrowth with lack of sufficient functional reconnections. New insights in cellular structure and mechanisms of nerve regeneration are needed, which leads to new prospects for intervention. We focus on repair and reconstruction of injured nerves to investigate interaction between spatial outgrowth of axons and its environment, particularly presence and formation of blood vessels. We assemble experimental rat models, including a diabetic rat model, in which nerves are repaired and reconstructed using novel strategies, such as application of silk threads between severed nerve ends. The peripheral nerves will be investigated using applied synchrotron imaging and quantitative image analysis. The gained insights will eventually lead to improved treatment strategies and quality of life for patients.
DOI: 10.15151/esrf-es-649328472
title: The nature of uranium in shales

description: Throughout geological history, organic-rich shales show systematic enrichment in uranium compared to other crustal rocks. Uranium concentrations vary significantly (&lt; 5 to &gt; 500ppm) among these shales in both time and space, as a result of global changes in the chemistry of the atmosphere and oceans through geological time, as well as local physical and chemical conditions of sedimentation and diagenetic processes. This experiment will be the first to use high resolution XANES spectroscopy to characterize U speciation in marine sediments. The aim of the study is to check the hypothesis that sorption rather than simple reduction might control the primary correlation between organic carbon content and U in shales.
DOI: 10.15151/esrf-es-646362162
title: Investigation of microstructure domains in rare-earth aluminum borates with huntite structure

description: Nominally pure and activated rare-earth aluminum borates of huntite-family, RAl3(BO3)4, are promising materials for lasers and nonlinear optics. Some of them typically show domain microstructure, which affects their functional properties sufficiently. In particular, twinning may degrade crystal quality and affect nonlinear optical properties, if crystals are composed of twin domains with opposing polarities. Here we propose to use X-ray natural circular dichroism (XNCD) effect to make an element selective map of the twinning of the laser-perspective crystals and demonstrate the existence of inversion twins unambiguously. Combining this experimental approach with the advantages of a new EBS-ESRF beam (radiation coherence, beam stability, and microfocusing), we will be able to fill a gap in the understanding of growth parameters-structure-properties relationships in conventional bulk crystals of rare-earth aluminum borates.
DOI: 10.15151/esrf-es-649171354
title: Sm valence and closure of the correlation gap in the Kondo insulator SmB6

description: The aim of the present proposal is to probe Sm Valence and magnetic state across the magnetic field induced closure of the correlation gap. In resistivity measurements, the closure has been observed at 89 T. It has also been shown, that the correlation gap inferred from resistivity measurements can be reduced through through the application of pressure at a rate of -0.7meV/GPa. We therefore use pressure to reduce and tune the gap, and pulsed high magnetic fields up to 30T in order to reach the expected closure. Previous measurements at ambient pressure and pressures up to 1.9 GPa did not show a significant evolution of the Sm valence contrary to expectations. In this continuation we therefore aim to corroborate this observation and to extend our measurements to higher pressures.
DOI: 10.15151/esrf-es-649171745
title: Understanding of the Fe(II) active site in mixed-metal MOFs for the conversion of methane to methanol

description: Selective oxidation of methane to methanol (MTM) represents a Holy Grail in catalysis, with enormous industrial potential and energetic/environmental impact. In this context, Fe-active sites in Metal Organic Frameworks (MOFs) are emerging as promising candidates, mimicking the unique selectivity of Fe-enzymes. Herein, we propose a combined in situ XAS/XES study targeting Fe(II) sites in novel FexNi3-xBTP2 MOFs, capable to form Fe(IV)=O species active towards MTM, using N2O as the oxo-transfer agent The resulting electronic/structural insights on Fe active sites and reactive intermediates, in combination with parallel soft-XAS studies are expected to unlock unprecedent spectroscopic details, paving the way to the rational design of improved MOF-based catalysts for the selective oxidation of key hydrocarbons.
DOI: 10.15151/esrf-es-649173970
title: Time resolved imaging of Winter’s magnons

description: The aim of the proposal is to investigate the dynamics of spin waves propagating in domain walls of thick permalloy elements. In particular, we will image their propagation and explore the intrinsic characteristics, such as eigen modes and damping parameter, as functions of the external stimuli. The investigation will be carried out using the high coherence of the EBS by time-resolved x-ray imaging, using Fourier transform holography with extended references.
DOI: 10.25345/c5m32nb07
title: MassIVE Reanalysis RMSV000000354.3542 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, MRPL38 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5gb1xh7z
title: MassIVE Reanalysis RMSV000000354.3541 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, GPX7 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5bk16q36
title: MassIVE Reanalysis RMSV000000354.3543 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, ACSBG2 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5281/zenodo.5979674
title: S93 | COCMOUTHING | Chemicals of Concern (CoCs) in children's mouthing exposure

description: This is the collection associated with list S91 COCMOUTHING | Chemicals of Concern (CoCs) in children's mouthing exposure on the NORMAN Suspect List Exchange. https://www.norman-network.com/nds/SLE/ A dataset of 60 Chemicals of Concern (CoCs) and their chemical migration rate into saliva due to mouthing exposure in children studied in Aurisano et. al DOI:10.1038/s41370-021-00354-0.<br> This dataset was used to develop a regression model for predicting migration rates for manifold chemical-material combinations to support high-throughput screening.<br> Structural identifiers and mapping to DTXSID provided by ECI.
description: {"references": ["DOI:10.1038/s41370-021-00354-0."]}
DOI: 10.25345/c56t0gw9f
title: MassIVE Reanalysis RMSV000000354.3544 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, MPP1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5319s340
title: MassIVE Reanalysis RMSV000000354.3545 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, TMCO6 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5z892f9c
title: MassIVE Reanalysis RMSV000000354.3546 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, TIMM50 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5525/gla.researchdata.1235
title: Rapid age-grading and species identification of natural mosquitoes for malaria surveillance

description: The malaria parasite, which is transmitted by several Anopheles mosquito species, requires more time to reach its human-transmissible stage than the average lifespan of mosquito vectors. Monitoring the species-specific age structure of mosquito populations is critical to evaluating the impact of vector control interventions on malaria risk. We developed a rapid, cost-effective surveillance method based on deep learning of mid-infrared spectra of mosquito cuticle that simultaneously identifies the species and age class of three main malaria vectors in natural populations. Using spectra from over 40,000 ecologically and genetically diverse An. gambiae, An. arabiensis, and An. coluzzii females, we developed a deep transfer learning model that learned and predicted the age of new wild populations in Tanzania and Burkina Faso with minimal sampling effort. Additionally, the model was able to detect the impact of simulated control interventions on mosquito populations, measured as a shift in their age structures. In the future, we anticipate our method can be applied to other arthropod vector-borne diseases.
DOI: 10.25345/c5th8bn6q
title: MassIVE Reanalysis RMSV000000354.3548 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, RP2 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5pv6b74t
title: MassIVE Reanalysis RMSV000000354.3547 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, TERF1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.5281/zenodo.5648270
title: Eddy covariance flux data at the Wüstebach clear-cut site for the 2020 growing season

description: Data related to the research article <em>Effects of Measurement Height and Low-Pass Filtering Corrections on Eddy-Covariance Flux Measurements Over a Forest Clearing with Complex Vegetation</em> published in <em>Boundary-Layer Meteorology</em>.
DOI: 10.25345/c5k35mf1g
title: MassIVE Reanalysis RMSV000000354.3553 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, HNRNPH2 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5fb4wm7q
title: MassIVE Reanalysis RMSV000000354.3552 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, FAM158A [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c59k45t3z
title: MassIVE Reanalysis RMSV000000354.3549 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, DTNA [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.3886/e163021
title: Data and Do File for Replicating Analysis in "State Higher Education Funding During COVID-19: Lessons from Prior Recessions and Implications for Equity"

description: This dataset and do file can be used to replicate analyses presented in "State Higher Education Funding During COVID-19: Lessons from Prior Recessions and Implications for Equity." The final analytic dataset comes from three publicly available data sources: the National Center for Education Statistics' Integrated Postsecondary Education Data System (https://nces.ed.gov/ipeds, cleaned and collapsed into enrollment-weighted state-level values), State Higher Education Executive Officers' Association State Higher Education Finance Dataset (https://shef.sheeo.org/data-downloads/), and the National Association of State Student Grant and Aid Programs (NASSGAP) annual survey (https://www.nassgapsurvey.com). Financial figures have been adjusted for inflation using the Consumer Price Index.
DOI: 10.3886/e163021v1
title: Data and Do File for Replicating Analysis in "State Higher Education Funding During COVID-19: Lessons from Prior Recessions and Implications for Equity"

description: This dataset and do file can be used to replicate analyses presented in "State Higher Education Funding During COVID-19: Lessons from Prior Recessions and Implications for Equity." The final analytic dataset comes from three publicly available data sources: the National Center for Education Statistics' Integrated Postsecondary Education Data System (https://nces.ed.gov/ipeds, cleaned and collapsed into enrollment-weighted state-level values), State Higher Education Executive Officers' Association State Higher Education Finance Dataset (https://shef.sheeo.org/data-downloads/), and the National Association of State Student Grant and Aid Programs (NASSGAP) annual survey (https://www.nassgapsurvey.com). Financial figures have been adjusted for inflation using the Consumer Price Index.
DOI: 10.25345/c55t3g084
title: MassIVE Reanalysis RMSV000000354.3555 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, TIGD5 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.
DOI: 10.25345/c5222r65s
title: MassIVE Reanalysis RMSV000000354.3551 - CCMS MassIVE Knowledge Base (MassIVE-KB) MS-GF+ reanalysis of Bioplex AP-MS Dataset for Library Construction, CGNL1 [launched by fce971e5ede541cca3fc5307a73294d8]
title: Center for Computational Mass Spectrometry (CCMS) systematic reanalysis of public proteomics mass spectrometry (MS) datasets provides a public, large-scale and comparable set of dataset reanalyses results including detailed provenance records. To further facilitate the broad reusability of public proteomics MS data, these reanalyses were also used to build the MassIVE Knowledge Base (MassIVE-KB) spectral library, a community-wide resource derived from hundreds of millions of identified spectra from tens of terabytes of mass spectrometry data.