cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/fgvwyg
title: Application of two molecular approaches (use of sex attractants and DNA barcoding) allowed to rediscover Zygaenoprocris eberti (Alberti, 1968) (Lepidoptera, Zygaenidae, Procridinae), hitherto known only from the female holotype

description: This dataset contains the digitized treatments in Plazi based on the original journal article Efetov, Konstantin A., Hofmann, Axel, Tarmann, Gerhard M. (2014): Application of two molecular approaches (use of sex attractants and DNA barcoding) allowed to rediscover Zygaenoprocris eberti (Alberti, 1968) (Lepidoptera, Zygaenidae, Procridinae), hitherto known only from the female holotype. Nota Lepidopterologica 37 (2): 151-160, DOI: http://dx.doi.org/10.3897/nl.37.7871, URL: http://dx.doi.org/10.3897/nl.37.7871
DOI: 10.15468/knmlxg
title: Systematic position of Eulachnus cembrae Boerner with description of hitherto unknown sexual morphs of E. pumilae Inouye (Hemiptera, Aphididae, Lachninae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kanturski, Mariusz, Wieczorek, Karina (2014): Systematic position of Eulachnus cembrae Boerner with description of hitherto unknown sexual morphs of E. pumilae Inouye (Hemiptera, Aphididae, Lachninae). Deutsche Entomologische Zeitschrift 61 (2): 123-132, DOI: http://dx.doi.org/10.3897/dez.61.8048, URL: http://dx.doi.org/10.3897/dez.61.8048
DOI: 10.15468/qyuchg
title: Phyllobrostis minoica sp. n. from Crete (Greece) - an expected discovery (Lepidoptera, Yponomeutoidea, Lyonetiidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Mey, Wolfram (2014): Phyllobrostis minoica sp. n. from Crete (Greece) - an expected discovery (Lepidoptera, Yponomeutoidea, Lyonetiidae). Nota Lepidopterologica 37 (2): 161-165, DOI: http://dx.doi.org/10.3897/nl.37.8098, URL: http://dx.doi.org/10.3897/nl.37.8098
DOI: 10.15468/zaypi7
title: A new species of Sinophasma Guenther, 1940 from Guangxi, China (Phasmida: Diapheromeridae: Necrosciinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article George, Ho Wai-chun (2014): A new species of Sinophasma Guenther, 1940 from Guangxi, China (Phasmida: Diapheromeridae: Necrosciinae). Deutsche Entomologische Zeitschrift 61 (1): 23-25, DOI: http://dx.doi.org/10.3897/dez.61.7129, URL: http://dx.doi.org/10.3897/dez.61.7129
DOI: 10.3886/icpsr35614.v3
title: Health Reform Monitoring Survey, United States, First Quarter 2014
title: Version 3

description: In January 2013, the Urban Institute launched the Health Reform Monitoring Survey (HRMS), a quarterly survey of the nonelderly population, to explore the value of cutting-edge, Internet-based survey methods to monitor the Affordable Care Act (ACA) before data from federal government surveys are available. Topics covered by the fifth round of the survey (first quarter 2014) include self-reported health status, type of and satisfaction with current health insurance coverage, access to and use of health care, health care affordability, awareness of key provisions of the ACA, sources of information about the health plans in the new ACA health insurance exchanges (healthcare.gov), the importance of various criteria in choosing health insurance plans, and whether the respondent enrolled in health insurance through healthcare.gov. Additional information collected by the survey includes age, education, race, Hispanic origin, gender, income, household size, housing type, marital status, employment status, United States citizenship, smoking, internet access, home ownership, body mass index, sexual orientation, and whether the respondent reported an ambulatory care sensitive condition or a mental or behavioral condition.
description: ICPSR data undergo a confidentiality review and are altered when necessary to limit the risk of disclosure. ICPSR also routinely creates ready-to-go data files along with setups in the major statistical software formats as well as standard codebooks to accompany the data. In addition to these procedures, ICPSR performed the following processing steps for this data collection: Checked for undocumented or out-of-range codes..
description: Response Rates: The HRMS response rate is roughly five percent each quarter.
description: Datasets: DS0: Study-Level Files DS1: Public-use Data DS2: Restricted-use Data
description: Health Reform Monitoring Survey (HRMS) Series
description: web-based survey
description: Household population aged 18-64.
description: Each quarterly HRMS sample is drawn from the KnowledgePanel, a probability-based, nationally representative Internet panel maintained by GfK Custom Research. Beginning with the second quarter of 2013, the HRMS includes oversamples of adults with family incomes at or below 138 percent of the federal poverty level and adults from selected state groups based on (1) the potential for gains in insurance coverage in the state under the ACA as estimated by the Urban Institute's microsimulation model and (2) states of specific interest to the HRMS funders. Additional funders have supported oversamples of adults from individual states or subgroups of interest (including children). However, ICPSR received data only for the adults in the general national sample and the income and state group oversamples.
DOI: 10.3886/icpsr34969.v2
title: Survey of Midlife in Japan (MIDJA): Biomarker Project, 2009-2010
title: Version 2

description: The MIDJA Biomarker study obtained biological assessments from a subsample (n=382) of MIDJA Survey (ICPSR 30822) respondents (N=1027). Participants traveled to a clinic near the University of Tokyo campus where Biomarker data (vital signs, morphometric assessments, blood assays, and medication data) were obtained. Participants also provided daily saliva samples for cortisol assessment and completed a self-administered medical history questionnaire. The questionnaire included assessments of conditions and symptoms, major health and life events, nutrition/diet, and additional psychosocial measures (anxiety, depression, relationship quality, control etc.). These measures parallel those in a national longitudinal sample of midlife Americans known as MIDUS (ICPSR 4652: MIDUS II and ICPSR 2760: MIDUS I). The central objective is to compare the Japanese sample (MIDJA) with the United States sample (MIDUS) to test the hypotheses regarding cultural differences in aging health and well-being as well as in how psychosocial factors are linked with biological factors known to influence profiles of disease and disability.
description: Presence of Common Scales: See the "Documentation of Scales and Constructed Variables in MIDJA Biomarker" available through the ICPSR and NACDA Web sites for complete information regarding the scales for the MIDJA Biomarker data collection.
description: Datasets: DS0: Study-Level Files DS1: Aggregate Data DS2: Stacked Medication Data
description: Midlife in the United States (MIDUS) Series
description: A subsample of the MIDJA Survey sample (ICPSR 30822) which is comprised of non-institutionalized, Japanese-speaking adults, aged 30-79 and living in one of the 23 wards of Tokyo from April 2008-September 2008. Smallest Geographic Unit: city
description: This data is a subsample of the MIDJA Survey. There were two eligibility criteria for this second phase of the data collection: (1) completed the initial survey phase and (2) expressed interest in participating in the second, biomarker, phase by returning a post card to CRS as described above.
DOI: 10.3886/icpsr34969.v3
title: Survey of Midlife in Japan (MIDJA): Biomarker Project, 2009-2010
title: Version 3

description: The MIDJA Biomarker study obtained biological assessments from a subsample (n=382) of MIDJA Survey (ICPSR 30822) respondents (N=1027). Participants traveled to a clinic near the University of Tokyo campus where Biomarker data (vital signs, morphometric assessments, blood assays, and medication data) were obtained. Participants also provided daily saliva samples for cortisol assessment and completed a self-administered medical history questionnaire. The questionnaire included assessments of conditions and symptoms, major health and life events, nutrition/diet, and additional psychosocial measures (anxiety, depression, relationship quality, control etc.). These measures parallel those in a national longitudinal sample of midlife Americans known as MIDUS (ICPSR 4652: MIDUS II and ICPSR 2760: MIDUS I). The central objective is to compare the Japanese sample (MIDJA) with the United States sample (MIDUS) to test the hypotheses regarding cultural differences in aging health and well-being as well as in how psychosocial factors are linked with biological factors known to influence profiles of disease and disability.
description: Presence of Common Scales: See the "Documentation of Scales and Constructed Variables in MIDJA Biomarker" available through the ICPSR and NACDA Web sites for complete information regarding the scales for the MIDJA Biomarker data collection.
description: Datasets: DS0: Study-Level Files DS1: Aggregate Data DS2: Stacked Medication Data
description: Midlife in the United States (MIDUS) Series
description: A subsample of the MIDJA Survey sample (ICPSR 30822) which is comprised of non-institutionalized, Japanese-speaking adults, aged 30-79 and living in one of the 23 wards of Tokyo from April 2008-September 2008. Smallest Geographic Unit: city
description: This data is a subsample of the MIDJA Survey. There were two eligibility criteria for this second phase of the data collection: (1) completed the initial survey phase and (2) expressed interest in participating in the second, biomarker, phase by returning a post card to CRS as described above.
DOI: 10.15468/ypnm2c
title: New Examples of Tyrannosaurus rex from the Lance Formation of Wyoming, United States

description: This dataset contains the digitized treatments in Plazi based on the original journal article Dalman, Sebastian G. (2013): New Examples of Tyrannosaurus rex from the Lance Formation of Wyoming, United States. Bulletin of the Peabody Museum of Natural History 54: 241-254, DOI: 10.3374/014.054.0202
DOI: 10.6084/m9.figshare.12977765
title: Doses_IMRT_IMPT_45_Patients.csv

description: IMRT and IMPT doses of 45 patients<br>
DOI: 10.6084/m9.figshare.12977765.v2
title: Doses_IMRT_IMPT_45_Patients.csv

description: IMRT and IMPT doses of 45 patients<br>
DOI: 10.6084/m9.figshare.12977765.v1
title: Doses_IMRT_IMPT_45_Patients.csv

description: IMRT and IMPT doses of 45 patients<br>
DOI: 10.6084/m9.figshare.12980243
title: EBSD data sets for "Temperature and strain controls on ice deformation mechanisms: insights from the microstructures of samples deformed to progressively higher strains at -10, -20 and -30 °C"

description: EBSD data sets of ice samples presented in Fan et al., 2020 (the Cryosphere paper). These ice samples were deformed under uniaxial compression with constant displacement rates (~1e-5/s) at -10, -20 and -30 °C to progressively higher strains.
DOI: 10.5281/zenodo.7664
title: False-Positive Psychology In .Txt Format

description: Data for the paper http://papers.ssrn.com/sol3/papers.cfm?abstract_id=1850704
DOI: 10.5281/zenodo.7750
title: Data Sets Of Mmp-Cliffs, Sar Transfer Series And Recap-Mmps

description: A new and up-to-date version of three MMP-based data sets derived from compounds included in the latest release of ChEMBL is presented. These data sets include activity cliffs, structure-activity relationship (SAR) transfer series, and second generation MMPs based upon retrosynthetic rules. The structural data and information are provided in eight different files comprising the three data sets of MMP-cliffs (two files), SAR transfer series (four files), and RECAP-MMPs (two files). All MMP-cliffs, SAR transfer series with approximate or regular potency progression, and RECAP-MMPs are provided in canonical SMILES representation on a per-target basis separately for the Ki and IC50 subsets. The corresponding files are clearly designated.
DOI: 10.5281/zenodo.8296
title: Data Of Quantitative, Ratiometric Dual Fluorescence Reporter Assay At The Single-Cell Level

description: The data set shows the evaluation of a new dual fluorescence reporter assay using three test genes, vimentin, lamin A/C and Arp3. This fluorescence protein-based reported assay successfully predicts siRNA efficacy with high fidelity. Data include images of Hela cells transfected with Vim-T4 ad Vim-T5 knockdown contructs; images of dual fluorescence assay; data analysis for knockdown experiments, Western blotting analysis of vimentin-knockdown in Hela cells, knockdown of endogenous lamin A/C in Hela cells; quantification of lamin A/C knockdown in Hela cells; dual fluorescence assay of human vimentin genes using three plasmids; Western blotting of Arp3 knockdown in SCC9 cells.

All files can be opened using LibreOffice or OpenOffice. Some of the ODS files have a minor problem when opening them in Excel in the Windows computers. Excel will give warning about some unreadable contents. By choosing the repair option, the file contents will be shown without changes compared to the original data. Detailed explanation is given in the “Explanation file”.
DOI: 10.5281/zenodo.8339
title: Conversion Of Fluoride And Chloride Catalized By Sam-Dependent Fluorinase In Nocardia Brasiliensis

description: Data sets show the following reactions:

- Fluorinase catalized conversion of fluoride and SAM to 5'-FDA and L-methionine (Explanation file: Figure 2).

- Fluorinase catalyzed conversion of chloride and SAM to 5’-ClDA and L-methionine in the presence of L-amino acid oxidase (Explanation file: Figure 3).
DOI: 10.5281/zenodo.8358
title: Drug-Unique Scaffolds

description: A list of 221 drug-unique scaffolds that represented approved drugs but were not detected in currently available bioactive compounds is provided. For each scaffold, the corresponding approved drug(s) are listed with their IDs in DrugBank and names. The structures of scaffolds and drugs are provided in canonical SMILES representation.
DOI: 10.5281/zenodo.8418
title: Detailed Data Sets Of Mmp-Cliffs, Sar Transfer Series, Recap-Mmps And Compound Activities

description: An up-to-date version of three MMP-based data sets derived from compounds included in the latest release of ChEMBL is presented. These data sets include activity cliffs, structure-activity relationship (SAR) transfer series, and second generation MMPs based upon retrosynthetic rules. The structural data and information are provided in eight different files comprising the data sets of MMP-cliffs, SAR transfer series, and RECAP-MMPs. Compound activities are incorporated in files of RECAP-MMPs. For transfer series, substituted fragments are also provided. All MMP-cliffs, SAR transfer series with approximate or regular potency progression, and RECAP-MMPs are provided in canonical SMILES representation on a per-target basis separately for the Ki and IC50 subsets. The corresponding files are clearly designated.
DOI: 10.5281/zenodo.8431
title: Molecular Dynamics Derived Side Chain Order Parameters For Asp, Glu, Asn, And Gln Residues In Ribonucleases H, And Molecular Dynamics Trajectories For E. Coli Ribonuclease H

description: This dataset contains tab-delimited text files reporting the complete calculated S2 side chain order parameters for carboxyl- and carbonyl-containing residues (Asp, Glu, Asn, Gln) in all RNase H homologs studied, as well as complete simulation trajectory data for the E. coli apo, site A, and site B simulations described in the text. We hope that easy access to the complete trajectory data for the experimentally best-characterized homolog will facilitate future comparison between simulation and experiments.

order_parameters_magnesium.dat contains the calculated S2 side chain order parameters for carboxyl- and carbonyl-containing residues in each of the three E. coli trajectories supplied in this dataset. These data are sufficient to reproduce Figure 6.

2RN2.apo.pdb, 2RN2.MG.siteA.pdb, and 2RN2.MG.siteB.pdb define the equilibrated structure from which the E. coli apo, site A, and site B trajectories were initiated. All protein atoms, including hydrogens, are included, as well as Mg ions. Explicit waters and chloride counterions have been removed.

2RN2.apo.dcd, 2RN2.MG.siteA.dcd, and 2RN2.MG.siteB.dcd contain 100ns trajectories initiated from the starting structures in the corresponding pdb files. Frames were written every 4.5ps. Trajectories have been aligned to the initial structure of the apo trajectory to facilitate visualization.

The remaining *.S2.CO.dat files contain the calculated S2 side chain order parameters for all apo RNases H simulated in this study. Each file is named for the PDB ID of its corresponding structure (see Table 1). These data are sufficient to reproduce Figure 8 (which reports on only the conserved active-site residues).
DOI: 10.5281/zenodo.8451
title: Programs For Chemoinformatics And Computational Medicinal Chemistry

description: Programs provided herein are a part of a freely available database of annotated compound data sets and software tools developed in our laboratory for chemoinformatics and computational medicinal chemistry. The original release is described in the following article:<br>
<br>
Hu Y, Bajorath J: Freely available compound data sets and software tools for chemoinformatics and computational medicinal chemistry applications [v1; ref status: indexed, http://f1000r.es/Mu9krs] <em>F1000Research</em> 2012; 1:11 (doi: 10.12688/f1000research.1-11.v1).<br>
<br>
The updated version containing the data provided herein will be described in a forthcoming data note in <em>F1000Research</em>.
DOI: 10.5281/zenodo.8455
title: Data Sets For Chemoinformatics And Computational Medicinal Chemistry

description: Data sets provided herein are a part of a freely available database of annotated compound data sets and software tools developed in our laboratory for chemoinformatics and computational medicinal chemistry. The original release is described in the following article:<br>
<br>
Hu Y, Bajorath J: Freely available compound data sets and software tools for chemoinformatics and computational medicinal chemistry applications [v1; ref status: indexed, http://f1000r.es/Mu9krs] <em>F1000Research </em>2012; 1:11 (doi: 10.12688/f1000research.1-11.v1).<br>
<br>
The updated version containing the data provided herein will be described in a forthcoming data note in <em>F1000Research</em>.
DOI: 10.5281/zenodo.8573
title: Robot List Oa-Statistics

description: <strong>Standard Robot Exclusion List</strong><br>
used by OA-Statistics. Compilation of some popular black-list.

<strong>Status of this document </strong>

This document represents a consensus of the german project OA-Statistik. It is not an official standard backed by a standards body, or owned by any commercial organisation. It is not enforced by anybody, and there no guarantee that all current and future robots will use it. It has also been open for discussion.
DOI: 10.5281/zenodo.8626
title: Prediction Of Compounds In Different Local Sar Environments Using Ecp

description: SD files of 15 data sets reported in the manuscript are uploaded. Each data set is represented by its CHEMBL Target ID. The file format is provided in the file 'description.txt'.
DOI: 10.5281/zenodo.8747
title: Data Set Of Ca1 Pyramidal Cell Models Using An Intact Whole Hippocampus Preparation

description: The frequency-current (f-I) profiles of pyramidal cells are presented. Each .abf file contains the f-I curve data for the respective cell (as labelled PYR1, PYR2, PYR3 and PYR4 for Pyramidal cell 1, Pyramidal cell 2, Pyramidal cell 3 and Pyramidal cell 4).  That is, they contain the cell's response to the application of a series of depolarizing current steps of 1 s duration while the cells are held in current clamp, as well as the current clamp data itself.  Each recording is 2 s total.  Amplitudes of the input were increased incrementally with step sizes of 10 pA for PYR1, PYR3, and PYR4, and a step size of 25 pA for PYR 2.  PYR1 first spikes on the 5th of 30 steps with 38.7 pA of depolarizing input.  PYR2 first spikes on the 3rd of 13 steps with 1.2 pA of input.  PYR3 first spikes on the 7th of 34 steps with 62.0 pA of input, and PYR4 first spikes on the 7th of 30 steps with 12.1 pA of input.
DOI: 10.5281/zenodo.9979
title: A Daily Azores-Iceland North Atlantic Oscillation Index Back To 1850

description: A Daily resolution North Atlantic Oscillation Index from (01/01/1850) to (31/12/2014). The index is derived from the difference in atmospheric sea-level pressure values between the Azores and Iceland. The article describing the NAO index is currently under revision at Geoscience Data Journal.
DOI: 10.5281/zenodo.10253
title: Datasets For Article: The Emotional And Attentional Impact Of Exposure To One’S Own Body In Bulimia Nervosa: A Physiological View

description: The data of the article titled: <strong>The emotional and attentional impact of exposure to one’s own body in bulimia nervosa: A physiological view</strong>

submitted to PLOS ONE
DOI: 10.5281/zenodo.14593
title: Oaflux Standardized

description: test uploading a file
DOI: 10.5281/zenodo.14597
title: Powertac 2014-05 Finals 1-9

description: Log and boot files of games 1 - 9
DOI: 10.5281/zenodo.14598
title: Powertac 2014-05 Finals 10-19

description: Log and boot files of games 10 - 19
DOI: 10.5281/zenodo.14599
title: Powertac 2014-05 Finals 20-29

description: Log and boot files of games 20 - 29
DOI: 10.5281/zenodo.14600
title: Powertac 2014-05 Finals 30-39

description: Log and boot files of games 30 - 39
DOI: 10.5281/zenodo.14603
title: Powertac 2014-05 Finals 40-49

description: Log and boot files of games 40 - 49
DOI: 10.5281/zenodo.14604
title: Powertac 2014-05 Finals 50-59

description: Log and boot files of games 50 - 59
DOI: 10.5281/zenodo.14605
title: Powertac 2014-05 Finals 60-69

description: Log and boot files of games 60 - 69
DOI: 10.5281/zenodo.14606
title: Powertac 2014-05 Finals 70-72

description: Log and boot files of games 70 - 72
DOI: 10.5281/zenodo.14607
title: Tetrode Recording From The Antennal Lobe Of A Locust (Schistocerca Americana)

description: 1

1

1A tetrode recording from the antennal lobe (the first olfactory relay) of a locust, Schistocerca americana. 20 seconds of data are contained in the file in HDF5 format. The data were filtered (before A/D conversion) between 300 and 5000 Hz and sampled at 15 kHz. See Pouzat, Mazor and Laurent (2002) Journal of Neuroscience Methods 122(1): 43--57 for recording details.
description: This data set is used in: Christophe Pouzat and Georgios Is Detorakis (2014) SPySort: Neuronal Spike Sorting with Python Proceedings of the 7th European Conference on Python in Science (EuroSciPy 2014), edited by Pierre de Buyl and Nelle Varoquaux, pp. 27–34 (arXiv:1412.6383)
description: {"references": ["Pouzat, Mazor and Laurent (2002) Journal of Neuroscience Methods 122(1): 43--57.", "Christophe Pouzat and Georgios Is Detorakis (2014) SPySort: Neuronal Spike Sorting with Python. Proceedings of the 7th European Conference on Python in Science (EuroSciPy 2014), edited by Pierre de Buyl and Nelle Varoquaux, pp. 27\u201334 (arXiv:1412.6383)."]}
DOI: 10.5281/zenodo.14612
title: Powertac 2014-04 Qualifying 1-10

description: Log and boot files of games 1 - 10
DOI: 10.5281/zenodo.14613
title: Powertac 2014-04 Qualifying 11-20

description: Log and boot files of games 11 - 20
DOI: 10.5281/zenodo.14614
title: Powertac 2014-04 Qualifying 21-30

description: Log and boot files of games 21 - 30
DOI: 10.5281/zenodo.14616
title: Powertac 2014-04 Qualifying 31-40

description: Log and boot files of games 31 - 40
DOI: 10.5281/zenodo.14617
title: Powertac 2014-04 Qualifying 41-50

description: Log and boot files of games 41 - 50
DOI: 10.5281/zenodo.14618
title: Powertac 2014-04 Qualifying 51-60

description: Log and boot files of games 51 - 60
DOI: 10.5281/zenodo.14619
title: Powertac 2014-04 Qualifying 61-70

description: Log and boot files of games 61 - 70
DOI: 10.5281/zenodo.14620
title: Powertac 2014-04 Qualifying 71-80

description: Log and boot files of games 71 - 80