cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3598358_d2
title: Additional file 5 of De novo transcriptome reconstruction and annotation of the Egyptian rousette bat

description: BLAST results of validated novel transcripts. The table is the BLAST output of the validated novel transcripts mapped to P. alecto genome. (XLS r27 kb)
DOI: 10.6084/m9.figshare.c.3598364_d1
title: Additional file 2: Table S2. of Dynamics of sterol synthesis during development of Leishmania spp. parasites to their virulent form

description: Homologous genes of Leishmania spp. sterol biosynthetic pathway (SBP). Trypanosoma cruzi SBP genes were used as gene ID during database search except those marked with an “*”, in which keyword search was used. Blank cells indicate data not available. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.c.3598346_d6
title: Additional file 9 of Changes in correlation between promoter methylation and gene expression in cancer

description: Clinical impact of cluster “3up”. Multivariate Cox regression analysis including the level of methylation in the cancer-specific cluster “3up” in addition to all clinical variables available for breast cancer. (CSV 4091 kb)
DOI: 10.6084/m9.figshare.c.3598358_d3
title: Additional file 4 of De novo transcriptome reconstruction and annotation of the Egyptian rousette bat

description: Novel transcripts information. Various Information on 8 novel coding transcripts are provided including average expression value, transcript length, CDS length, ORF length, transcript sequence, cds sequence, ORF sequence, primers used, and expected amplicon sizes. (XLS 90 kb)
DOI: 10.6084/m9.figshare.c.3598325_d6
title: Additional file 3: of Monoamine oxidase B gene variants associated with attention deficit hyperactivity disorder in the Indo-Caucasoid population from West Bengal

description: Functional significance of MAOB polymorphic variants predicted in silico using is-rSNP. Description: The table summarizes functional regulatory role of MAOB polymorphic variants. (XLSX 40 kb)
DOI: 10.6084/m9.figshare.c.3598325_d7
title: Additional file 5: of Monoamine oxidase B gene variants associated with attention deficit hyperactivity disorder in the Indo-Caucasoid population from West Bengal

description: Genotypic distribution of MAOB variants in female subjects. Description: The table summarizes comparative analysis on genotypic distribution of MAOB variants in female ADHD cases and sex matched controls. (XLSX 10 kb)
DOI: 10.34740/kaggle/dsv/9755601
title: Crosby, Stills, Nash and Young Dataset
DOI: 10.15468/dl.yvwdjy
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Octopus vulgaris Cuvier, 1797",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 39 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032387-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3598394_d3
title: Additional file 1: of Serum depletion induces changes in protein expression in the trophoblast-derived cell line HTR-8/SVneo

description: Table S2. Preliminary assay: proteins identified via MS and bioinformatics analysis from 0.5 % serum culture. HTR-8/SVneo cells were grown in medium with 10 or 0.5 % FBS for 24 h. Total protein extracts (0.15 mg) were separated by 7 cm 2DE gels as previously described. Protein spots were analyzed via MALDI TOF and identified using the MASCOT search engine. MW (kDa) – theoretical and experimental molecular weight in kDalton; pI ~ – theoretical pI; MS score – protein score given by Mascot; % Seq – percentage sequence coverage; Pep match – number of peptides assigned to protein; Fold FBS 0.5 %/10 % – fold optical density of protein spot (expression) of 0.5 % serum proteomes (0.5 % FBS) compared to control proteomes (10 % FBS). Relevant GO terms for molecular function and biological process, retrieved by Nextprot database and DAVID tool. (XLS 57 kb)
DOI: 10.6084/m9.figshare.c.3598409_d1
title: MOESM4 of Stride-related rein tension patterns in walk and trot in the ridden horse

description: Additional file 4. Rein tension during the stride cycle at the trot for the left (black) and right (grey) rein per horse. Each row indicates one rider. Significant differences (P &lt; 0.0001) between the left and right rein are shown as broken red lines in the inside rein. Stride percentages zero and 100 represent mid-stance of the right forelimb.
DOI: 10.6084/m9.figshare.c.3598409_d2
title: MOESM3 of Stride-related rein tension patterns in walk and trot in the ridden horse

description: Additional file 3. Rein tension during the stride cycle at the walk for the left (black) and right (grey) rein per horse. Each row indicates one rider. Significant differences (P &lt; 0.0001) between the left and right rein are shown as broken red lines in the inside rein. Stride percentages zero and 100 represent mid-stance of the right forelimb.
DOI: 10.6084/m9.figshare.c.3598409_d3
title: MOESM1 of Stride-related rein tension patterns in walk and trot in the ridden horse

description: Additional file 1. The rein tension meter used in the study. Earlier published in Eisersiö M, Roepstorff L, Rhodin M, Egenvall A. Rein tension in eight professional riders during regular training sessions. JVB: Clinical applications and research. 2015;10:419-426.
DOI: 10.6084/m9.figshare.c.3598412_d2
title: Additional file 2: of Reliability of breath by breath spirometry and relative flow-time indices for pulmonary function testing in horses

description: Raw data. (XLS 414 kb)
DOI: 10.6084/m9.figshare.c.3598394_d5
title: Additional file 5: Table S4. of Serum depletion induces changes in protein expression in the trophoblast-derived cell line HTR-8/SVneo

description: Database accession of proteins identified via MS/MS and bioinformatics analysis. (XLS 106 kb)
DOI: 10.6084/m9.figshare.c.3598418_d1
title: Additional file 6: Table S5. of Range-wide genetic structure and demographic history in the bat ectoparasite Cimex adjunctus

description: Sequence, primer concentration ([Primer]), annealing temperature (TÂ°), total number of alleles, and size range information for nine microsatellite markers previously designed for Cimex lectularius (by 1: Fountain et al. [41] and 2: Booth et al. [42]), used here on Cimex adjunctus samples. For each marker, we also show the average number of alleles (NA), expected heterozygosity (HE), observed heterozygosity (HO) and inbreeding coefficient (GIS) across all sites with five or more sampled individuals. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.c.3598418_d2
title: Additional file 2: Table S2. of Range-wide genetic structure and demographic history in the bat ectoparasite Cimex adjunctus

description: Details of sampling locations where we collected Cimex adjunctus specimens used in this study. Site refers to each unique sampling locationÂ and correspond to those in Additional file 1: Table S1. Sample size refers to the number of specimens collected at each site. Capture method refers to the way C. adjunctus samples were collected: either from the body of a bat that was captured outside a roost with a mist net or a harp trap (Bat capture), or from inside of the roost itself (Roost visit). Site characteristics refers either to the type of roost (house, barn, cabin, church or abandoned mine) in, or next to which, we collected samples, or to the forested land jurisdiction where collection was performed. (XLSX 37 kb)
DOI: 10.6084/m9.figshare.c.3598448_d1
title: Additional file 11 of Multicopy gene family evolution on primate Y chromosomes

description: Nine concatenated msrY-linked singleton genes maximum clade credibility tree. Summary of 95 % high posterior density interval information for tree shown in Fig. 1. (TREE 14.5 KB)
DOI: 10.6084/m9.figshare.c.3598448_d2
title: Additional file 9 of Multicopy gene family evolution on primate Y chromosomes

description: TSPY 3 â ˛ half BEAST input file. Alignment, calibration nodes, nucleotide substitution model, and specification of priors for right tree shown in Additional file 1: Figure S6. (XML 54 kb)
DOI: 10.15468/dl.skrxjf
title: Occurrence Download

description: A dataset containing 518 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eciton rapax Smith, 1855"
 ]
}

 The dataset includes 518 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032388-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3598463_d1
title: Additional file 1: Table S1. of The PBMC transcriptome profile after intake of oxidized versus high-quality fish oil: an explorative study in healthy subjects

description: Significantly changed gene transcripts (p &gt; 0.05) between the oxFO and FO groups determined by a moderated t test (Limma), by comparing the relative change from the baseline to 7 weeks of intervention. oxFO oxidized fish oil, FO fish oil, FC fold change from baseline, FDR false discovery rate. (XLSX 34 kb)
DOI: 10.6084/m9.figshare.c.3598448_d3
title: Additional file 5 of Multicopy gene family evolution on primate Y chromosomes

description: HSFY BEAST input file. Alignment, calibration nodes, nucleotide substitution model, and specification of priors for tree shown in Additional file 1: Figure S3. (XML 207 kb)
DOI: 10.6084/m9.figshare.c.3598433_d7
title: Additional file 9: of Engineering high Zn in tomato shoots through expression of AtHMA4 involves tissue-specific modification of endogenous genes

description: Selected tomato genes present in microarray. (XLSX 525 kb)
DOI: 10.6084/m9.figshare.c.3598463_d2
title: Additional file 2: Table S2. of The PBMC transcriptome profile after intake of oxidized versus high-quality fish oil: an explorative study in healthy subjects

description: GSEA analyses applied on the genes defined as expressed in PBMCs (21,236) for comparison of the transcriptome profile between the two groups oxFO vs FO. Gene sets in the C2 cp collection were used. ES enrichment score. NES normalized enrichment score. (XLSX 33 kb)
DOI: 10.6084/m9.figshare.c.3598463_d3
title: Additional file 3: Table S3. of The PBMC transcriptome profile after intake of oxidized versus high-quality fish oil: an explorative study in healthy subjects

description: GSEA analyses applied on the genes defined as expressed in PBMCs (21,236) for comparison of the transcriptome profile between the two groups oxFO vs FO. Gene sets in the C5 bp collection were used. ES enrichment score, NES normalized enrichment score. (XLSX 25 kb)
DOI: 10.6084/m9.figshare.c.3598487_d1
title: Additional file 1: of Marital status, widowhood duration, gender and health outcomes: a cross-sectional study among older adults in India

description: Multilevel linear and logistic regression that estimates the relationships between explanatory variables and outcomes. (XLSX 56Â kb)
DOI: 10.6084/m9.figshare.c.3598448_d12
title: Additional file 12 of Multicopy gene family evolution on primate Y chromosomes

description: CDY maximum clade credibility tree. Summary of 95 % high posterior density interval information for tree shown in Additional file 1: Figure S1. (TREE 70.9 KB)
DOI: 10.6084/m9.figshare.c.3598448_d13
title: Additional file 17 of Multicopy gene family evolution on primate Y chromosomes

description: TSPY 5 â ˛ half maximum clade credibility tree. Summary of 95 % high posterior density interval information for left tree shown in Additional file 1: Figure S6. (TREE 104 KB)
DOI: 10.6084/m9.figshare.c.3598535_d1
title: Additional file 2: of Knowledge, attitudes and practices regarding HIV/AIDS among senior secondary school students in Fako Division, South West Region, Cameroon

description: Variation in KAP by age group of participants. Description of data: This presents a comparative analysis of KAP between study participants in various age groups. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.c.3598535_d2
title: Additional file 3: of Knowledge, attitudes and practices regarding HIV/AIDS among senior secondary school students in Fako Division, South West Region, Cameroon

description: Correlation between knowledge and attitude, and knowledge and practice. This shows the relationship of participantsâ   knowledge on HIV/AIDS and their attitude towards people living with HIV and also the relationship of their knowledge and their practices on HIV prevention. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3598538_d1
title: Additional file 1: of An ontology for major histocompatibility restriction

description: Goals and status of the MRO project. (XLSX 16Â kb)
DOI: 10.6084/m9.figshare.c.3598448_d14
title: Additional file 15 of Multicopy gene family evolution on primate Y chromosomes

description: RBMY maximum clade credibility tree. Summary of 95 % high posterior density interval information for tree shown in Additional file 1: Figure S4. (TREE 157 KB)
DOI: 10.6084/m9.figshare.c.3598535_d3
title: Additional file 1: of Knowledge, attitudes and practices regarding HIV/AIDS among senior secondary school students in Fako Division, South West Region, Cameroon

description: Variation in KAP by gender. This shows an analysis of variation in KAP between male and female participants. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3598448_d15
title: Additional file 7 of Multicopy gene family evolution on primate Y chromosomes

description: TSPY BEAST input file. Alignment, calibration nodes, nucleotide substitution model, and specification of priors for tree shown in Additional file 1: Figure S5. (XML 86 kb)
DOI: 10.6084/m9.figshare.c.3598550_d2
title: MOESM12 of Development of a central nervous system axonal myelination assay for high throughput screening

description: Additional file 12: Table S1. NCC library screen data set.
DOI: 10.6084/m9.figshare.c.3598448_d16
title: Additional file 18 of Multicopy gene family evolution on primate Y chromosomes

description: TSPY 3 â ˛ half maximum clade credibility tree. Summary of 95 % high posterior density interval information for right tree shown in Additional file 1: Figure S6. (TREE 106 KB)
DOI: 10.6084/m9.figshare.c.3598448_d17
title: Additional file 8 of Multicopy gene family evolution on primate Y chromosomes

description: TSPY 5 â ˛ half BEAST input file. Alignment, calibration nodes, nucleotide substitution model, and specification of priors for left tree shown in Additional file 1: Figure S6. (XML 54 kb)
DOI: 10.6084/m9.figshare.c.3598556_d2
title: MOESM2 of Microorganism-regulated mechanisms of temperature effects on the performance of anaerobic digestion

description: Additional file 2. Additional tables.
DOI: 10.6084/m9.figshare.c.3598448_d18
title: Additional file 6 of Multicopy gene family evolution on primate Y chromosomes

description: RBMY BEAST input file. Alignment, calibration nodes, nucleotide substitution model, and specification of priors for tree shown in Additional file 1: Figure S4. (XML 191 kb)
DOI: 10.6084/m9.figshare.c.3598448_d19
title: Additional file 14 of Multicopy gene family evolution on primate Y chromosomes

description: HSFY maximum clade credibility tree. Summary of 95 % high posterior density interval information for tree shown in Additional file 1: Figure S3. (TREE 94.2 KB)
DOI: 10.15468/dl.7vs2wa
title: Occurrence Download

description: A dataset containing 854 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gadus macrocephalus Tilesius, 1810",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 854 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032389-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3598583_d4
title: Additional file 1: of Simultaneous fecal microbial and metabolite profiling enables accurate classification of pediatric irritable bowel syndrome

description: Complete PLS-DA input datasets. This file contains input datasets that were used to generate PLS-DA models. (XLSX 591Â kb)
DOI: 10.6084/m9.figshare.c.3598610_d2
title: Additional file 5: of Expansion of the phosphatidylethanolamine binding protein family in legumes: a case study of Lupinus angustifolius L. FLOWERING LOCUS T homologs, LanFTc1 and LanFTc2

description: Microsyntenic links identified between superscaffold-1 and legume genome regions. Sequences producing numerous links dispersed over many chromosomes were denoted as “repetitive”. (XLS 837 kb)
DOI: 10.6084/m9.figshare.c.3598610_d3
title: Additional file 3: of Expansion of the phosphatidylethanolamine binding protein family in legumes: a case study of Lupinus angustifolius L. FLOWERING LOCUS T homologs, LanFTc1 and LanFTc2

description: Reference accessions assigned to genes predicted in superscaffolds carrying LanFTc1 and LanFTc2 genes. (XLS 34 kb)
DOI: 10.15468/dl.5dwb5a
title: Occurrence Download

description: A dataset containing 161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fungi",
 "Geometry POLYGON ((-92.63878 16.6329, -92.5458 16.6329, -92.5458 16.7222, -92.63878 16.7222, -92.63878 16.6329))",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material citation)"
 ]
 }
 }
 ]
}

 The dataset includes 161 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032390-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3598664_d1
title: Additional file 1: of Genome-wide association analysis on pre-harvest sprouting resistance and grain color in U.S. winter wheat

description: Table S1. Pedigree, sources, origins and preharvest sprouting phenotypic data of 185 accessions in the genome-wide association study panel. (XLSX 121 kb)
DOI: 10.6084/m9.figshare.c.3598664_d2
title: Additional file 4: of Genome-wide association analysis on pre-harvest sprouting resistance and grain color in U.S. winter wheat

description: Table S4. Kompetitive Allele Specific PCR assays developed from significant SNPs for the 4A pre-harvest sprouting resistance quantitative trait locus. (XLSX 33 kb)
DOI: 10.6084/m9.figshare.c.3598664_d3
title: Additional file 3: of Genome-wide association analysis on pre-harvest sprouting resistance and grain color in U.S. winter wheat

description: Table S3. Quantitative trait loci identified at least twice among eight experiments using the association mapping population and the Best Linear Unbiased Prediction (BLUP) of greenhouse and field data of wheat sprouting rates in a spike. (XLSX 59 kb)
DOI: 10.6084/m9.figshare.c.3598664_d4
title: Additional file 2: of Genome-wide association analysis on pre-harvest sprouting resistance and grain color in U.S. winter wheat

description: Table S2. Environmental statistics of greenhouse and field conditions in Manhattan and Hays (XLSX 44 kb)
DOI: 10.6084/m9.figshare.c.3598661_d7
title: Additional file 6: Table S5. of Genome-wide identification and characterization of auxin response factor (ARF) family genes related to flower and fruit development in papaya (Carica papaya L.)

description: The saw data of the CpARF family during the different fruit developmental stages. (XLSX 10Â kb)
DOI: 10.6084/m9.figshare.c.3598676_d2
title: Additional file 2: of Progranulin promotes peripheral nerve regeneration and reinnervation: role of notch signaling

description: Supplementary Tables. (XLSX 27Â kb)
DOI: 10.6084/m9.figshare.c.3598673_d2
title: Additional file 4: of SNP-markers in Allium species to facilitate introgression breeding in onion

description: Table S4. Results of Blast2Go to obtain functional anotation of onion contigs containing SNPs that were selected for the KASP platform. (XLSX 101Â kb)
DOI: 10.15468/dl.sm4yxq
title: Occurrence Download

description: A dataset containing 1228 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Stenella attenuata (Gray, 1846)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1228 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032391-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3598718_d2
title: Additional file 5: of A comparison of human and mouse gene co-expression networks reveals conservation and divergence at the tissue, pathway and disease levels

description: Evolutionary changes of gene sets described by the four parameters of conservation explained in the manuscript. Sheet 1: results using tissue gene sets. Sheet 2: results using pathway gene sets. Sheet 3: results using disease gene sets. (XLS 552 kb)
DOI: 10.6084/m9.figshare.c.3598724_d2
title: Additional file 2: of Patch testing in Iranian children with allergic contact dermatitis

description: Data set on age, gender, type of allergen, location of contact dermatitis. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3598733_d1
title: Additional file 1: of Transgelin gene is frequently downregulated by promoter DNA hypermethylation in breast cancer

description: Expression changes upon AZA treatments. Probe IDs, gene names, and fold change ratios of the genes altered upon AZA treatment in each cell line at 1.5 fold and Pâ
DOI: 10.6084/m9.figshare.c.3598718_d3
title: Additional file 1: of A comparison of human and mouse gene co-expression networks reveals conservation and divergence at the tissue, pathway and disease levels

description: Gene co-expression and connectivity. List of humans and mice homologous genes annotated with HGNC symbols together with further information retrieved from Biomart Ensembl and from the analysis of co-expression maps (Entrez IDs, Homology Type, dN/dS, number of homologs from the top 5% co-expressed genes in humans and mice, number of commonly co-expressed genes, connectivity values in humans and mice, differential connectivity). (XLS 3371 kb)
DOI: 10.6084/m9.figshare.c.3598733_d2
title: Additional file 3: of Transgelin gene is frequently downregulated by promoter DNA hypermethylation in breast cancer

description: Final gene lists altered upon AZA treatments only in breast cancer cell lines. Probe IDs, gene names, accession numbers and fold change ratios of the genes altered upon AZA treatment, in each breast cancer cell line at 1.5 fold and P
DOI: 10.6084/m9.figshare.c.3598718_d4
title: Additional file 6: of A comparison of human and mouse gene co-expression networks reveals conservation and divergence at the tissue, pathway and disease levels

description: Novel candidate conserved homologs associated with genes sets. Sheet 1: results using tissue gene sets. Sheet 2: results using pathway gene sets. Sheet 3: results using disease gene sets. Sheets 4, 5 and 6: Same analysis as sheet 1, 2 and 3 but using one-to-one homologous genes only. (XLS 11362 kb)
DOI: 10.6084/m9.figshare.c.3598718_d5
title: Additional file 4: of A comparison of human and mouse gene co-expression networks reveals conservation and divergence at the tissue, pathway and disease levels

description: Functional analysis of genes differentially connected between mice and humans. Sheet 1: Functional annotation clustering conducted with DAVID of the top 5 % of homologs ranked by differential connectivity. Sheet 2: Functional annotation clustering conducted with DAVID of the bottom 5 % of homologs ranked by differential connectivity. Sheets 3 and 4: Same analysis as sheet 1 and 2 but using one-to-one homologous genes only. Sheets 5–8: Functional enrichment analysis using the GSEA method on the same gene lists as described for sheet 1–4. (XLS 2487 kb)