cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/aryy0-sy462
title: Vibrio DeltaVC1403

description: Vibrio cholerae strain CO35 (delta VC1403)cytoplasmic chemoreceptor in chemotaxis operon with CheA1(F9 chemotaxis system)
description: <strong>Tilt Series Date:</strong> 2015-01-16</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain generated by Catherine Oikonomou</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown 24 hrs in LB at 30C, diluted 150 µl into 2 ml Ca-HEPES buffer, grown 16 hours at 30C</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-01-16-9/rawdata/</p>VibrioCO35setBmanua80008.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-01-16-9/rawdata/VibrioCO35setBmanua80008.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibrioCO35setBmanua80008_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2015-01-16-9/3dimage_50836/VibrioCO35setBmanua80008_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/3yth6-5h585
title: Mtr_recons_in_liposome

description: Final liposome conc: 2 mg/ml, grid # - PS123 - 2, ref pg 63 in notebook for details
description: <strong>Tilt Series Date:</strong> 2015-12-12</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Shewanella oneidensis</p>
<strong>Strain:</strong> MR-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 65.0 eV/Å²,  defocus: -5.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Sahand and Moh, USC</p>
<strong>Sample Preparation:</strong> vitrobot freezing conditions 6, 3- ref pg 63</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-12-12-21/3dimage_71438/</p>atlas1_sq40024_full.rec,  Reconstruction (Pixel Size 1.28 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-12-12-21/3dimage_71438/atlas1_sq40024_full.rec"
        > <i class="download icon"></i> Download </a></p>

        atlas1_sq40024.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-12-12-21/rawdata/atlas1_sq40024.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.25976/1q5q-zy55
title: Kensington North Watersheds Association Water Quality Data

description: Water quality data collected throughout the Kensington North region starting in 2019. Data are being collected for various projects and to obtain baseline values to compare against in the future. Various analysis methods were used including handheld YSI probes, the PEI Analytical Laboratory, and a YSI photometer.
DOI: 10.22002/796xh-87d94
title: WT LP01 from Liu lab, Yale

description: Type four secretion system, T4SS
description: <strong>Tilt Series Date:</strong> 2016-11-28</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-51.0°, 51.0°), step: 3°, constant angular increment, dosage: 50.0 eV/Å²,  defocus: -5.0 μm,  magnification: 15500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Data collected by Bo Hu in Jun Liu lab at Yale from their Polara. Partial WT strain data set. Primary literature:  doi: 10.1038/s41564-018-0165-z</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-85/rawdata/</p>LP02Jan30A022_driftcorr.mrc,  Tilt Series (Pixel Size 0.25 nm), 2.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-85/rawdata/LP02Jan30A022_driftcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        LP02Jan30A022_driftcorr.rec,  Reconstruction (Pixel Size 1.0 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-85/3dimage_104883/LP02Jan30A022_driftcorr.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.16331046
title: Weak X-ray Bursts on Slowly Accreting Neutron Stars

description: Here are the files necessary to reproduce the burst simulations from our work, "Weak X-Ray Bursts on Slowly Accreting Neutron Stars," using MESA version 23.05.1, compiled with MESA SDK version 23.7.3.
DOI: 10.5281/zenodo.16331047
title: Weak X-ray Bursts on Slowly Accreting Neutron Stars

description: Here are the files necessary to reproduce the burst simulations from our work, "Weak X-Ray Bursts on Slowly Accreting Neutron Stars," using MESA version 23.05.1, compiled with MESA SDK version 23.7.3.
DOI: 10.22002/yv14a-wj191
title: nanochemowt

description: This is my fourth attempt to grow Shewanella. This culture is wt grown at caltech in chemostat.Frozen here in vitrobot.
description: <strong>Tilt Series Date:</strong> 2015-06-01</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Shewanella oneidensis</p>
<strong>Strain:</strong> MR-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -7.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Moh and Sahand USC</p>
<strong>Sample Preparation:</strong> This sample was frozen after being in oxygen deficiency for 16h. Checked by SEM and had nanowires. Vitrobot freezing conditions 6s blot force, 3s blot time, 1s drain time, 4ul on grid.</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-06-01-3/rawdata/</p>nanochemo_atlas10002.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-06-01-3/rawdata/nanochemo_atlas10002.mrc"
        > <i class="download icon"></i> Download </a></p>

        nanochemo_atlas10002_full.rec,  Reconstruction (Pixel Size 1.92 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-06-01-3/3dimage_57668/nanochemo_atlas10002_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/menr7-g1248
title: dmsh

description: This is a mutant in which Msh (Mannose-sensitive hemagglutinin), a type 4 pili in Shewanella has been knocked down. This was done to test whether the pili I see are msh or pilsystem. Turns out, what I see in wt is msh because in the msh knockdown they are absent and pil knockdown they are present. Msh H-Q has been knocked down. This is the complete biosynthetic machinery.
description: <strong>Tilt Series Date:</strong> 2015-07-08</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Shewanella oneidensis</p>
<strong>Strain:</strong> MR-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Moh and Sahand, USC</p>
<strong>Purification / Growth Conditions / Treatment:</strong> This was grown in serum bottles.</p>
<strong>Sample Preparation:</strong> blotting conditions - 6,3. drain time 1s.</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-07-08-14/rawdata/</p>atlas3_dmsh0014.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-07-08-14/rawdata/atlas3_dmsh0014.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas3_dmsh0014_full.rec,  Reconstruction (Pixel Size 1.92 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2015-07-08-14/3dimage_58941/atlas3_dmsh0014_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.aw4egv
title: Occurrence Download

description: A dataset containing 1665 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Arctostaphylos pungens"
 ]
}

 The dataset includes 1665 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047467-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wmmwnh
title: Occurrence Download

description: A dataset containing 11361 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pseudotsuga menziesii",
 "Country is Germany",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11361 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047466-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/abxx9-3sz87
title: T5_1693Cys_Aumalemaide_5nm

description: This is a sample in which N terminus residue 1693 has been mutated to Cys residue. Minicells have been isolated by high-speed centrifugation and cells are Au maleimide labeled. No fiducials added.
description: <strong>Tilt Series Date:</strong> 2017-04-02</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> EC93 stick, UPEC536</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 140.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Zach Ruhe and Chris Hayes</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Freezing in vitrobot.</p>
<strong>Sample Preparation:</strong> Sample prepared by Taylor Steven</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-04-02-33/rawdata/</p>cys1693_sq48_4sqs0010.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-04-02-33/rawdata/cys1693_sq48_4sqs0010.mrc"
        > <i class="download icon"></i> Download </a></p>

        cys1693_sq48_4sqs0010_part131_2.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2017-04-02-33/3dimage_83468/cys1693_sq48_4sqs0010_part131_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mhhhh-5vw86
title: WT LP01 from Liu lab, Yale

description: Type four secretion system, T4SS
description: <strong>Tilt Series Date:</strong> 2016-11-28</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-51.0°, 51.0°), step: 3°, constant angular increment, dosage: 50.0 eV/Å²,  defocus: -5.0 μm,  magnification: 15500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Data collected by Bo Hu in Jun Liu lab at Yale from their Polara. Partial WT strain data set. Primary literature:  doi: 10.1038/s41564-018-0165-z</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-222/rawdata/</p>T4SSWTDec12A067_driftcorr.mrc,  Tilt Series (Pixel Size 0.25 nm), 2.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-222/rawdata/T4SSWTDec12A067_driftcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        T4SSWTDec12A067_driftcorr.rec,  Reconstruction (Pixel Size 1.0 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-222/3dimage_104981/T4SSWTDec12A067_driftcorr.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/xjk07-mks58
title: INS-1E with Calreticulin-YFP

description: CLEM and ECT
description: <strong>Tilt Series Date:</strong> 2016-04-17</p>
<strong>Data Taken By:</strong> Shrawan kumar Mageswaran</p>
<strong>Species / Specimen:</strong> INS-1E Pancreatic Cells expressing Calreticulin-YFP</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1°, constant angular increment, dosage: 0.47368421 eV/Å²,  defocus: -8.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Zachary Freyberg from University of Pittsburgh provided the frozen cells on grids. Collaboration via Stephen Carter. CLEM and ECT done by me.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2016-04-17-9/rawdata/</p>Calreticulin-TS23.st,  Tilt Series (Pixel Size 0.6 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2016-04-17-9/rawdata/Calreticulin-TS23.st"
        > <i class="download icon"></i> Download </a></p>

        Calreticulin-TS23_part111_13.rec,  Reconstruction (Pixel Size 2.4 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2016-04-17-9/3dimage_74336/Calreticulin-TS23_part111_13.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ayds3-fbq95
title: Protein complex

description: BG505 SOSIP trimer-354BG18 Fab-179nc75 Fab complex
description: <strong>Tilt Series Date:</strong> 2015-11-23</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -8.0 μm,  magnification: 41000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> motioncorr_v2.1,IMOD patch tracking</p>
<strong>Collaborators and Roles:</strong> Haoqing Wang @ Pamela Bjorkman lab prepared the sample</p>
<strong>Sample Preparation:</strong> 160mg/ml frozen on C-flat 400 Mesh Cu grid</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-11-23-28/3dimage_71174/</p>atlas1_0048_mcorr.rec,  Reconstruction (Pixel Size 1.04 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-11-23-28/3dimage_71174/atlas1_0048_mcorr.rec"
        > <i class="download icon"></i> Download </a></p>

        atlas1_0048_mcorr.mrc,  Tilt Series (Pixel Size 0.26 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2015-11-23-28/rawdata/atlas1_0048_mcorr.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.k5u7ey
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lophura rufa",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047469-250811113504898/datasets/export for details.
DOI: 10.22002/rneg5-d4n10
title: cryo-FIB INS-1E

description: Overexpressing PIS-GFP
description: <strong>Tilt Series Date:</strong> 2017-01-16</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Rat INS-1E pancreatic beta cells</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> None</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Zach Freyberg</p>
<strong>Purification / Growth Conditions / Treatment:</strong> https://advances.sciencemag.org/content/6/14/eaay9572/tab-figures-data</p>
<strong>Sample Preparation:</strong> Manual Blotting</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-01-16-7/rawdata/</p>tomography10.mrc,  Tilt Series (Pixel Size 6.328 nm), 788.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-01-16-7/rawdata/tomography10.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography10_full.rec,  Reconstruction (Pixel Size 0.0 nm), 1.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2017-01-16-7/3dimage_118452/tomography10_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/e06v8-fev82
title: WT LP01 from Liu lab, Yale

description: Type four secretion system, T4SS
description: <strong>Tilt Series Date:</strong> 2016-11-28</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-51.0°, 51.0°), step: 3°, constant angular increment, dosage: 50.0 eV/Å²,  defocus: -5.0 μm,  magnification: 15500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Data collected by Bo Hu in Jun Liu lab at Yale from their Polara. Partial WT strain data set. Primary literature:  doi: 10.1038/s41564-018-0165-z</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-367/rawdata/</p>T4SSWTNov26A074_driftcorr.mrc,  Tilt Series (Pixel Size 0.25 nm), 2.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-367/rawdata/T4SSWTNov26A074_driftcorr.mrc"
        > <i class="download icon"></i> Download </a></p>

        T4SSWTNov26A074_driftcorr.rec,  Reconstruction (Pixel Size 1.0 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2016-11-28-367/3dimage_105105/T4SSWTNov26A074_driftcorr.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/npwh0-v5e78
title: Planktonic cell of Proteus

description: Planktonic cell, PG layer, Proteus mirabillis
description: <strong>Tilt Series Date:</strong> 2015-12-26</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Proteus mirabilis</p>
<strong>Strain:</strong> HI4320</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 195.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFtomo</p>
<strong>Collaborators and Roles:</strong> Douglas B. Weibel lab, Wisconsin-Madison university</p>
<strong>Purification / Growth Conditions / Treatment:</strong> OD=6, 4 ul loading. bloting condition 6s force/ 3s time/ 1s dry time, QUANTIFOIL® – Holey Carbon Films 200 mesh</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2015-12-26-35/3dimage_71905/</p>proteus30035.rec,  Reconstruction (Pixel Size 1.92 nm), 889.0 MB  
        
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        proteus30035.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
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