cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18801275
title: LINF_340020600

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.5281/zenodo.18801276
title: LINF_340020600

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.434fmn
title: Occurrence Download

description: A dataset containing 36690 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aldina speciosa, Aldina stergiosii, Aldina yapacanensis, Alexa bauhiniiflora, Alexa canaracunensis, Alexa confusa, Alexa cowanii, Alexa grandiflora, Alexa herminiana, Alexa imperatricis, Alexa leiopetala, Alexa superba, Alexa surinamensis, Alexa wachenheimii, Algernonia amazonica, Alibertia benensis, Alibertia bertierifolia, Alibertia claviflora, Alibertia concolor, Alibertia curviflora, Alibertia duckeana, Alibertia duckei, Alibertia edulis, Alibertia elliptica, Alibertia hadrantha, Alibertia hispida, Alibertia iquitensis, Alibertia isernii, Alibertia itayensis, Alibertia latifolia, Alibertia macrophylla, Alibertia myrciifolia, Alibertia obidensis, Alibertia occidentalis, Alibertia patinoi, Alibertia pilosa, Alibertia sorbilis, Alibertia stenantha, Alibertia stipularis, Alibertia verrucosa, Alibertia verticillata, Alicia macrodisca, Allantoma decandra, Allantoma integrifolia, Allantoma kuhlmannii, Allantoma lineata, Allantoma pachyantha, Allantoma pauciramosa, Allantoma pluriflora, Allantoma uaupensis, Allophylastrum frutescens, Allophylus acutatus, Allophylus amazonicus, Allophylus amentaceus, Allophylus angustatus, Allophylus chrysoneurus, Allophylus cinnamomeus, Allophylus densiflorus, Allophylus dioicus, Allophylus divaricatus, Allophylus edulis, Allophylus excelsus, Allophylus floribundus, Allophylus glabratus, Allophylus guaraniticus, Allophylus heterophyllus, Allophylus incanus, Allophylus latifolius, Allophylus leiophloeus, Allophylus leptostachys, Allophylus leucoclados, Allophylus loretensis, Allophylus mollis, Allophylus multicostatus, Allophylus nitidulus, Allophylus paniculatus, Allophylus pauciflorus, Allophylus peruvianus, Allophylus petiolulatus, Allophylus pilosus, Allophylus psilospermus, Allophylus puberulus, Allophylus punctatus, Allophylus racemosus, Allophylus robustus, Allophylus scrobiculatus, Allophylus semidentatus, Allophylus sericeus, Allophylus stenodictyus, Allophylus strictus, Alseis blackiana, Alseis eggersii, Alseis floribunda, Alseis labatioides, Alseis latifolia, Alseis longifolia, Alseis lugonis, Alseis microcarpa, Alseis mutisii, Alseis peruviana)",
 {
 "or" : [
 "Year is greater than or equal to 1850",
 "HasCoordinate is true"
 ]
 },
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "Continent is one of (South America, North America)"
 ]
}

 The dataset includes 36690 records from 542 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001927-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wfyjna
title: Occurrence Download

description: A dataset containing 16099 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (, , , , , , , , , , , , , , , , , , , , , , , , , , , , , Pennisetum purpureum, , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Lanista annulicornis, Phyladelphus geminus, , Atherigona mitrata, , , , , , , , Atherigona steeleae, Atherigona conigera, , , Scoliophthalmus trapezoides, Heteronychus bituberculatus, Colpixys gigas, , , , , , , , , Pachylophus inornatus, , Encya sikorai, Berlesezetes ornatissimus, , , , , , , , , , , Gonatocerus rakitovi, , Pachylophus varipes, Hebrus pilipes, , Atherigona falcata, , Celidota parvula, , Atherigona yorki, , Gonatocerus blefuscu, , Hoplochelus betanimena, , Empecta scutata, , Asprothrips bimaculatus, Heteronychus plebejus, , Camponotus eperiamorum, , , , , , Oligonychus neotylus, Acaroceras galapagoensis, Adenomera diptyx, , , Acomys kempi, , Baenothrips cuneatus, , , , Chaetocnema nigrica, Thryonomys swinderianus, Balclutha jafara, , Wasmannia auropunctata, , Bicyclus milyas, , Atherigona bedfordi, , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , )",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 16099 records from 403 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001926-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qezz4n
title: Occurrence Download

description: A dataset containing 126 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Portugal",
 "OccurrenceStatus is Present",
 "TaxonKey is Ranunculus nigrescens"
 ]
}

 The dataset includes 126 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001929-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18800880
title: Engagement communautaire et durabilité de la soie sauvage en forêt de tapia, Madagascar

description: Cette étude analyse la relation entre l’engagement communautaire et la durabilité de la filière de soie sauvage (Borocera cajani) associée aux formations de tapia (Uapaca bojeri) dans la région Itasy, Madagascar.

La production de soie sauvage, ressource socio-écologique emblématique, connaît un déclin progressif sous l’effet combiné de pressions anthropiques, de contraintes écologiques et de faiblesses organisationnelles.

L’étude repose sur une enquête transversale menée auprès de 297 ménages dans la commune rurale d’Arivonimamo II. Un indice standardisé d’engagement communautaire (appartenance à la VOI, participation aux réunions, satisfaction, perception d’équité) et un score composite de durabilité (activité actuelle, formation, monitoring, perception de tendance) ont été construits et analysés à l’aide de statistiques descriptives et de modèles de régression logistique et linéaire.

Les résultats montrent que l’engagement communautaire est significativement associé à une probabilité plus élevée de percevoir la filière comme « en évolution » (OR = 2,26 ; p = 0,025), mais son effet sur un indicateur composite de durabilité reste modéré. La proportion de ménages encore actifs dans la production demeure faible (8,4 %) et l’accès à la formation limité, révélant que la gouvernance communautaire, bien que nécessaire, ne suffit pas à garantir la durabilité effective du système.

L’étude met également en évidence l’importance d’un dispositif structuré de suivi technique et administratif de l’élevage, combinant gouvernance locale (VOI), enregistrement quotidien par unité d’élevage et indicateurs biologiques clés.

Les résultats soulignent que la durabilité de la filière landibe dépend d’une approche intégrée associant :





renforcement organisationnel des VOI,




formation technique des acteurs,




suivi systématique de la production,




restauration et gestion durable des formations de tapia,




réduction des pressions anthropiques (charbon, feux).



Cette recherche contribue à la littérature sur la gouvernance communautaire des ressources naturelles et les systèmes socio-écologiques à Madagascar, en apportant une analyse quantitative originale des liens entre engagement social et durabilité d’une filière forestière non ligneuse.
DOI: 10.5281/zenodo.18800881
title: Engagement communautaire et durabilité de la soie sauvage en forêt de tapia, Madagascar

description: Cette étude analyse la relation entre l’engagement communautaire et la durabilité de la filière de soie sauvage (Borocera cajani) associée aux formations de tapia (Uapaca bojeri) dans la région Itasy, Madagascar.

La production de soie sauvage, ressource socio-écologique emblématique, connaît un déclin progressif sous l’effet combiné de pressions anthropiques, de contraintes écologiques et de faiblesses organisationnelles.

L’étude repose sur une enquête transversale menée auprès de 297 ménages dans la commune rurale d’Arivonimamo II. Un indice standardisé d’engagement communautaire (appartenance à la VOI, participation aux réunions, satisfaction, perception d’équité) et un score composite de durabilité (activité actuelle, formation, monitoring, perception de tendance) ont été construits et analysés à l’aide de statistiques descriptives et de modèles de régression logistique et linéaire.

Les résultats montrent que l’engagement communautaire est significativement associé à une probabilité plus élevée de percevoir la filière comme « en évolution » (OR = 2,26 ; p = 0,025), mais son effet sur un indicateur composite de durabilité reste modéré. La proportion de ménages encore actifs dans la production demeure faible (8,4 %) et l’accès à la formation limité, révélant que la gouvernance communautaire, bien que nécessaire, ne suffit pas à garantir la durabilité effective du système.

L’étude met également en évidence l’importance d’un dispositif structuré de suivi technique et administratif de l’élevage, combinant gouvernance locale (VOI), enregistrement quotidien par unité d’élevage et indicateurs biologiques clés.

Les résultats soulignent que la durabilité de la filière landibe dépend d’une approche intégrée associant :





renforcement organisationnel des VOI,




formation technique des acteurs,




suivi systématique de la production,




restauration et gestion durable des formations de tapia,




réduction des pressions anthropiques (charbon, feux).



Cette recherche contribue à la littérature sur la gouvernance communautaire des ressources naturelles et les systèmes socio-écologiques à Madagascar, en apportant une analyse quantitative originale des liens entre engagement social et durabilité d’une filière forestière non ligneuse.
DOI: 10.5281/zenodo.13729346
title: Olive_FMBN

description: This repository hosts data and scripts created by me (Eugenio Parente) for the "METAOLIVE: meta-omic approaches for traditional table olive fermentation" project (more here). This project is co-funded by Ministero dell’Università e della Ricerca PRIN 2022, proposal 2022NN28ZZ, and received funding from the European Union Next-GenerationEU - PIANO NAZIONALE DI RIPRESA E RESILIENZA (PNRR). olive_FMBN contains scripts and data with phyloseq objects (and their metadata; including an extra_metadata file with further metadata for bacterial and fungal samples) on olive fermentations extracted from FoodMicrobionet v5_1_2.

Please cite as: Ricciardi, A., López, F.N.A., Giavalisco, M., Pietrafesa, R., Parente, E., 2025. Determining the core bacterial and fungal genera in table olive fermentations. Int. J. Food Microbiol. 442, 111344. https://doi.org/10.1016/j.ijfoodmicro.2025.111344
DOI: 10.5281/zenodo.18801334
title: Olive_FMBN

description: This repository hosts data and scripts created by me (Eugenio Parente) for the "METAOLIVE: meta-omic approaches for traditional table olive fermentation" project (more here). This project is co-funded by Ministero dell’Università e della Ricerca PRIN 2022, proposal 2022NN28ZZ, and received funding from the European Union Next-GenerationEU - PIANO NAZIONALE DI RIPRESA E RESILIENZA (PNRR). olive_FMBN contains scripts and data with phyloseq objects (and their metadata; including an extra_metadata file with further metadata for bacterial and fungal samples) on olive fermentations extracted from FoodMicrobionet v5_1_2.

Please cite as: Ricciardi, A., López, F.N.A., Giavalisco, M., Pietrafesa, R., Parente, E., 2025. Determining the core bacterial and fungal genera in table olive fermentations. Int. J. Food Microbiol. 442, 111344. https://doi.org/10.1016/j.ijfoodmicro.2025.111344
DOI: 10.5281/zenodo.17723784
title: Dissecting the cellular architecture of breast cancer brain metastases reveals prognostically distinct immune landscapes

description: Breast cancer brain metastases (BCBM) are a severe condition with high demand for improved personalized treatment, but a comprehensive understanding of BCBM immune-microenvironment heterogeneity and susceptibility to immunotherapy is lacking. Here, we multimodally profile the immune niche in a vast, clinically annotated cohort of BCBM applying tissue cytometry, bulk and single nuclei RNA-sequencing, and spatial transcriptomics, complemented by flow cytometric and functional studies in patient-derived organoids. Here the spatial and snRNAseq data is deposited.
DOI: 10.5281/zenodo.17723783
title: Dissecting the cellular architecture of breast cancer brain metastases reveals prognostically distinct immune landscapes

description: Breast cancer brain metastases (BCBM) are a severe condition with high demand for improved personalized treatment, but a comprehensive understanding of BCBM immune-microenvironment heterogeneity and susceptibility to immunotherapy is lacking. Here, we multimodally profile the immune niche in a vast, clinically annotated cohort of BCBM applying tissue cytometry, bulk and single nuclei RNA-sequencing, and spatial transcriptomics, complemented by flow cytometric and functional studies in patient-derived organoids. Here the spatial and snRNAseq data is deposited.
DOI: 10.5281/zenodo.18801345
title: MEASURES TO ESTABLISH MODERN MEDICINE IN THE BUKHARA PEOPLE'S SOVIET REPUBLIC

description: This article provides a scholarly analysis of the measures aimed at forming and establishing a modern medical system in the Bukhara People’s Soviet Republic. The study highlights healthcare reforms carried out in 1920–1924, the organization of a network of medical institutions, the establishment of sanitary and epidemiological services, measures to combat infectious diseases among the population, and issues related to training local medical personnel. It also examines the transition from traditional healing practices to scientific medicine, the central government’s healthcare policy, and its social significance. The article evaluates the introduction of modern medicine as an important factor in the socio-economic development of Bukhara society.
DOI: 10.5281/zenodo.18801346
title: MEASURES TO ESTABLISH MODERN MEDICINE IN THE BUKHARA PEOPLE'S SOVIET REPUBLIC

description: This article provides a scholarly analysis of the measures aimed at forming and establishing a modern medical system in the Bukhara People’s Soviet Republic. The study highlights healthcare reforms carried out in 1920–1924, the organization of a network of medical institutions, the establishment of sanitary and epidemiological services, measures to combat infectious diseases among the population, and issues related to training local medical personnel. It also examines the transition from traditional healing practices to scientific medicine, the central government’s healthcare policy, and its social significance. The article evaluates the introduction of modern medicine as an important factor in the socio-economic development of Bukhara society.
DOI: 10.15468/dl.9nszve
title: Occurrence Download

description: A dataset containing 9569333 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Oreochromis niloticus, Oreochromis niloticus, Oreochromis nilotics, Oreochromis mossambicus, Oreochromis mozambica, Orechromis mossambica, Anguilla anguilla, Anguilla anguillai, Anguilla anguillia, Dicentrarchus labrax, Ctenopharyngodon idella, Ctenopharyngodon idellos, Ctenopharingodon idellus, Ctenopharygodon idella, Polyodon spathula, Coregonus oxyrinchus, Coregonus clupeaformis, Coregonus clupeiformis, Coregonus artedi, Coregonus actedii, Salmo salar, Salmo salmo, Salmo salar mas, Salmo callaris, Salmo pallaryi, Salmo taleri, Salmo pallargi, Salmo pallasii, Salmo saurus, Salmo trutta, Oncorhynchus mykiss, Onchorhynchus mykiss, Onchorynchus mykiss, Oncorhynchus gorbuscha, Onchorhynchus gorbuscha, Oncorhynchus keta, Oncorhynchus masou, Oncorhynchus masu, Oncorhynchus nerka, Oncorhynchus tshawytscha, Oncorhynchus tshawytsha, Oncorhynchus tschawytscha, Oncorhynchus kisutch, Oncorhynchus kisatch, Oncorhynchus kisutsh, Salvelinus fontinalis, Salvelinus alpinus, Salvelinus namaycush, Salvelinus namaycuch, Osmerus mordax, Esox lucius, Colossoma macropomum, Colossoma macropodum, Colossoma marcopomum, Colosomma macropomum, Carassius carassius, Carassius auratus, Carasius auratus, Rutilus rutilus, Rutilus rubilio, Rutilus rubella, Hypophthalmichthys molitrix, Hypopthalmichthys molitrix, Hypothalmichthys molitrix, Hypophthalmichthys nobilis, Hypothalmichthys nobilis, Parabramis pekinensis, Ictalurus punctatus, Anguilla rostrata, Anguilla austrata, Agulla rostrata, Anguilla australis, Anguilla austrata, Angguilla australis, Anguina australis, Agulla australis, Conger oceanicus, Menidia menidia, Menida menida, Centropomus undecimalis, Lates calcarifer, Morone saxatilis, Morone saxitilis, Perca fluviatilis, Perca fluviatilus, Persea fluviatilis, Persea fluviatilis, Perca flavescens, Perla flavescens, Perna flavescens, Phoca flavescens, Sparus aurata, Sparus auratus, Sparus auriga, Sparus aureus, Scarus auritus, Sparus hurta, Sciaenops ocellatus, Cyprinus carpio, Cyprinus caspicus)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "CoordinateUncertaintyInMeters is less than 10000",
 "Year is greater than or equal to 1900",
 "BasisOfRecord is one of (Human Observation, Machine Observation)",
 "DistanceFromCentroidInMeters is greater than or equal to 1000"
 ]
}

 The dataset includes 9569333 records from 939 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001903-260226173443078/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16629648
title: Tree inventory including structural and health attributes of urban trees

description: This dataset, produced within the framework of the H2020 VARCITIES project, contains detailed field measurements of urban trees in green spaces across Chania, Greece. It includes data on individual tree characteristics such as species, total height, trunk perimeter, diameter at breast height (DBH), live tree height, and crown dimensions. Each tree is geolocated with precise latitude and longitude coordinates, and observations also capture information on land use, crown health (including dieback percentage), light exposure, and the proportion of the crown that is missing. The measurements were taken within defined urban parks, contributing valuable data to assess vegetation structure, ecological health, and the role of trees in improving urban microclimates and environmental quality.
DOI: 10.5281/zenodo.16629649
title: Tree inventory including structural and health attributes of urban trees

description: This dataset, produced within the framework of the H2020 VARCITIES project, contains detailed field measurements of urban trees in green spaces across Chania, Greece. It includes data on individual tree characteristics such as species, total height, trunk perimeter, diameter at breast height (DBH), live tree height, and crown dimensions. Each tree is geolocated with precise latitude and longitude coordinates, and observations also capture information on land use, crown health (including dieback percentage), light exposure, and the proportion of the crown that is missing. The measurements were taken within defined urban parks, contributing valuable data to assess vegetation structure, ecological health, and the role of trees in improving urban microclimates and environmental quality.
DOI: 10.5281/zenodo.16629652
title: Data for figures
DOI: 10.5281/zenodo.16629653
title: Data for figures
DOI: 10.15468/dl.5nuzvp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alternanthera brasiliana",
 "Country is Palau",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078886-250717081556266/datasets/export for details.
DOI: 10.17632/4n4xbnx8sr
title: Hyperspectral_corn_seed_dataset

description: The dataset simulates phenotypic analysis scenarios of maize seeds under controlled laboratory conditions, with the ambient temperature maintained at 20–25°C. Comprehensive testing was conducted using 12 different maize varieties. Approximately 200 seed samples were collected per variety, resulting in a total sample size of about 2400, each subjected to hyperspectral and RGB image acquisition. Preprocessing steps included noise reduction, background removal, band selection, and modality alignment. To ensure the accuracy and reliability of the experimental data, HHIT software and Python were utilized for data processing.
DOI: 10.17632/4n4xbnx8sr.1
title: Hyperspectral_corn_seed_dataset

description: The dataset simulates phenotypic analysis scenarios of maize seeds under controlled laboratory conditions, with the ambient temperature maintained at 20–25°C. Comprehensive testing was conducted using 12 different maize varieties. Approximately 200 seed samples were collected per variety, resulting in a total sample size of about 2400, each subjected to hyperspectral and RGB image acquisition. Preprocessing steps included noise reduction, background removal, band selection, and modality alignment. To ensure the accuracy and reliability of the experimental data, HHIT software and Python were utilized for data processing.
DOI: 10.25505/fiz.icsd.cc1xm07s
title: CSD 1775935: Experimental Crystal Structure Determination

description: Related Article: T.  Stanley Cameron, Jack Passmore, Xinping Wang|2004|Angew.Chem.,Int.Ed.|43|1995|doi:10.1002/anie.200352969
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc1xm08t
title: CSD 1775936: Experimental Crystal Structure Determination

description: Related Article: T.  Stanley Cameron, Jack Passmore, Xinping Wang|2004|Angew.Chem.,Int.Ed.|43|1995|doi:10.1002/anie.200352969
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc82y9k
title: CCDC 241158: Experimental Crystal Structure Determination

description: Related Article: P.Kilian, H.L.Milton, A.M.Z.Slawin, J.D.Woollins|2004|Inorg.Chem.|43|2252|doi:10.1021/ic035364h
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.