cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/s3w6pv
title: Sirindhornia Pinkaew and Muadsub (Lepidoptera: Tortricidae), a new enarmoniine genus from Thailand

description: This dataset contains the digitized treatments in Plazi based on the original journal article Muadsub, Sopita, Pinkaew, Nantasak (2014): Sirindhornia Pinkaew and Muadsub (Lepidoptera: Tortricidae), a new enarmoniine genus from Thailand. Zootaxa 3869 (1): 53-63, DOI: http://dx.doi.org/10.11646/zootaxa.3869.1.5
DOI: 10.18112/openneuro.ds003638.v1.0.0
title: EEG: Electrophysiological biomarkers of behavioral dimensions from cross-species paradigms
DOI: 10.5066/f7br8r2b
title: Natural infections with Pigeon Paramyxovirus-1: Pathologic changes in Eurasian collared-doves (Streptopelia decaocto) and rock pigeons (Columba livia) in the USA: Data

description: We reviewed pathological findings and to a lesser extent epidemiological data from 70 free-ranging columbiforms naturally infected with Pigeon paramyxovirus-1 (PPMV-1) from 25 different PPMV-1 mortality events in columbiforms in the USA. In a subset of 17 birds from 10 of the studied outbreaks, we carried out immunohistochemistry targeting PPMV-1 nucleoprotein to determine the tissue distribution of the virus.
DOI: 10.5066/f72806k3
title: Environmental conditions synchronize waterbird mortality events in the Great Lakes: Data

description: During 2010 to 2013, waterbird mortality surveillance programs used a shared protocol for shoreline walking surveys performed June to November at three areas in northern Lake Michigan. Timing (to day) and location (to transect) of carcass deposition and species affected were summarized. Using these observations, the broader goal of our study was to quantify the spatial synchrony of avian mortality events and explore whether within-year lake conditions (lake surface temperatures and the presence of algal masses) were related to the magnitude and periodicity of these mortality events. We generated the data on bird mortality, but we used publically-available data from the National Aeronautics and Space Administration for lake surface temperatures and algal masses as approximated by chlorophyll-a concentration (http://neo.sci.gsfc.nasa.gov/). As part of a Great Lakes Restoration Initiative study, the carcass data have also been used to assess between year trends (Chipault et al. 2015), some birds collected during surveillance were tested for botulism type E to assess the toxin presence across species (Chipault et al. 2015), some birds were also used in a gut content study to analyze what was consumed before death (Essian et al. 2016), and some of the spatially-explicit carcass data were used in backtracing models to estimate the source of the toxin in the environment (Kenow et al. 2016).
DOI: 10.5066/p93wakh3
title: Experimental infection of Tadarida brasiliensis with the fungus that causes white-nose syndrome: hibernation data

description: This dataset includes skin temperatures of twelve Tadarida brasiliensis held in environmental chambers maintained at 7.7 (SD 0.9) degrees C and 91.8 (SD 0.8) % relative humidity to induce and support hibernation for up to 3 months. Bats were randomly assigned to infected and control groups at the start of the experiment and infected with conidia of Pseudogymnoascus destructans or a sham treatment (negative control). An iBBat temperature logger (Alpha Mach, Ste-Julie, Quebec, Canada) was attached to the dorsal surface of each bat and programmed to record skin temperature every 15 minutes until the end of the experiment when the bat died or was euthanized.
DOI: 10.5066/p93vje52
title: Pathology and bacteriology of 178 tadpoles with histologically confirmed Severe Perkinsea Infections: Data

description: (i) This dataset presents macroscopic and microscopic pathological findings and bacteriology of 178 tadpoles diagnosed with Severe Perkinsea Infections. (ii) Specimen were collected and submitted to the NWHC as part of mortality investigations and collection of specimen from apparently healthy populations as part of ongoing amphibian health monitoring. (iii) Necropsies and gross evaluation of carcasses were carried out under a dissecting microscope. (iv) Severe Perkinsea Infection was confirmed in each specimen by histological observation of pathological changes in tissues with presence of Perkinsea-like organisms in at least one organ, including brain, eyes, gastrointestinal tract, gills, heart, liver, lungs, kidney, pancreas, skeletal muscle, skin, spinal cord, spleen, and thyroid gland. (v) For each carcass, the overall extent in percentage, and distribution of the histologic lesions on hematoxylin and eosin slides, the distribution of the Perkinsea-like organisms in different organs (including hypnospore-like and trophozoite-like organisms), and the trophozoite-like/hypnospore-like estimated ratio (T/H) in liver were assessed by a board-certificated veterinary pathologist (MIA). (vi) Fresh liver or spleens of a subset of specimens were processed for bacterial testing.
DOI: 10.5066/f79w0dqr
title: Data release for Investigation of a largescale common murre (Uria aalge) mortality event in California in 2015

description: During 2015, beachcast bird survey programs (Beach Watch and BeachCOMBERS) reported higher than average deposition of common murres (Uria aalge) on central and northern California beaches from August through December. Increased common murre mortality was not reported for southern California beaches. International Bird Rescue (IBR) located in Fairfield, CA and other coastal wildlife rehabilitation centers received more than 1,000 live, stranded and debilitated murres from Sonoma County to San Luis Obispo County during August - October. Approximately 2/3 of birds admitted to IBR were after-hatch-year birds in emaciated body condition and in various stages of molt, with extremely worn plumage. To determine the probable cause of death of beachcast carcasses, internal examinations were performed on a sample of birds at the California Department of Fish and Wildlife Marine Wildlife Veterinary Care and Research Center (MWVCRC; n=28) and the United States Geological Survey National Wildlife Health Center (NWHC, n=7). As observed by IBR, most birds examined during necropsy were emaciated, with starvation the most likely cause of death. Birds were also tested for underlying infectious diseases at NWHC and harmful algal bloom toxins at the University of California, Santa Cruz (UCSC) and the National Oceanographic and Atmospheric Administration's Northwest Fisheries Science Center (NWFSC). Twenty-four out of 29 tested birds had detectable levels of domoic acid, and no indication of infectious disease was found. Emaciation is thought to be the cause of death for these birds, with a large warm water anomaly and harmful algal bloom playing a secondary detrimental role. While our work exclusively assesses the die-off in California, there was a large, concurrent die-off of murres in Alaska, Oregon, and Washington.
DOI: 10.6084/m9.figshare.16635931
title: Proposed mechanism of enzyme transport between shipworms and their bacterial symbionts

description: Bacterial carbohydrate active enzymes (CAZymes) play an important role in wood digestion in shipworms. The main site of lignocellulose digestion within these wood-boring molluscs is the caecum, which contains both endogenous lignocellulolytic enzymes and prokaryotic enzymes produced by endosymbiotic bacteria resident within specialised shipworm cells called bacteriocytes, located in the animal’s gills. Until now, the mechanism by which bacterial enzymes reach the distant caecum lumen has remained mysterious.
DOI: 10.6084/m9.figshare.16635931.v1
title: Proposed mechanism of enzyme transport between shipworms and their bacterial symbionts

description: Bacterial carbohydrate active enzymes (CAZymes) play an important role in wood digestion in shipworms. The main site of lignocellulose digestion within these wood-boring molluscs is the caecum, which contains both endogenous lignocellulolytic enzymes and prokaryotic enzymes produced by endosymbiotic bacteria resident within specialised shipworm cells called bacteriocytes, located in the animal’s gills. Until now, the mechanism by which bacterial enzymes reach the distant caecum lumen has remained mysterious.
DOI: 10.6084/m9.figshare.16638427.v1
title: rathee2021.zip

description: meg data and scriptdata originally provided by rathee et al. (2021)<br>
DOI: 10.6084/m9.figshare.16638427
title: rathee2021.zip

description: meg data and scriptdata originally provided by rathee et al. (2021)<br>
DOI: 10.25345/c5g844
title: MassIVE MSV000088111 - GNPS_In_Vitro_Disease_Tolerance_C2C12_T.cruzi_CL+LUC_Test1_Positive
title: C2C12 cells infected and uninfected by Trypanosoma Cruzi strain CL+Luc cultured in different sized well plates (6, 12, 24), extracted by two different methods, 1-step and 2-step, ran in LCMS Polar C18 column in positive and negative modes.
DOI: 10.15482/usda.adc/1523132
title: Agricultural land use by field: Nebraska 2010-2020
DOI: 10.15482/usda.adc/1523133
title: Agricultural land use by field: Illinois 2010-2020
DOI: 10.6084/m9.figshare.16638499
title: Raw tree files

description: Raw tree files used for phylogenetic analysis
DOI: 10.21227/9c3a-x738
title: SensorData (Thermal Comfort)

description: This dataset contains the collection of temperature, humidity, heat index, thermal discomfort index and temperature and humidity index of five indoor environments in São Paulo, Brazil. Data were collected using the ESP32 microcontroller and the DHT11 temperature and humidity sensor.
DOI: 10.25345/c5bk1v
title: MassIVE MSV000088112 - GNPS_In_Vitro_Disease_Tolerance_C2C12_T.cruzi_CL+LUC_Test1_Negative
title: C2C12 cells infected and uninfected with Trypansoma cruzi strain CL + Luciferase cultured in different sized well plates (6, 12, 24), extracted using two different methods (1-step and 2-step), were analyzed using LCMS Polar C18 column in positive and negative modes.
DOI: 10.5281/zenodo.5514263
title: Huntingtin structure is orchestrated by HAP40 and shows a polyglutamine expansion-specific interaction with exon 1

description: Supplementary Data files to accompany manuscript by Harding et al "Huntingtin structure is orchestrated by HAP40 and shows a polyglutamine expansion-specific interaction with exon 1" Supplementary Data 1 - Multiple sequence alignment for HTT used for Consurf analysis Supplementary Data 2 - Multiple sequence alignment for HAP40 used for Consurf analysis Supplementary Data 3 - Apo HTT cryo-EM map Supplementary Data 4 - HTT-HAP40 Q23 regularised SAXS profile Supplementary Data 5 - HTT-HAP40 Q54 regularised SAXS profile Supplementary Data 6 - HTT-HAP40 Δexon 1 regularised SAXS profile Supplementary Data 7 - XL-MS data Supplementary Data 8 - HTT-HAP40 ensemble weightings Supplementary Data 9 - HTT-HAP40 Q23 ensemble models Supplementary Data 10 - HTT-HAP40 Q54 ensemble models Supplementary Data 11 - HTT-HAP40 Δexon 1 ensemble models
DOI: 10.5281/zenodo.5514262
title: Huntingtin structure is orchestrated by HAP40 and shows a polyglutamine expansion-specific interaction with exon 1

description: Supplementary Data files to accompany manuscript by Harding et al "Huntingtin structure is orchestrated by HAP40 and shows a polyglutamine expansion-specific interaction with exon 1" Supplementary Data 1 - Multiple sequence alignment for HTT used for Consurf analysis Supplementary Data 2 - Multiple sequence alignment for HAP40 used for Consurf analysis Supplementary Data 3 - Apo HTT cryo-EM map Supplementary Data 4 - HTT-HAP40 Q23 regularised SAXS profile Supplementary Data 5 - HTT-HAP40 Q54 regularised SAXS profile Supplementary Data 6 - HTT-HAP40 Δexon 1 regularised SAXS profile Supplementary Data 7 - XL-MS data Supplementary Data 8 - HTT-HAP40 ensemble weightings Supplementary Data 9 - HTT-HAP40 Q23 ensemble models Supplementary Data 10 - HTT-HAP40 Q54 ensemble models Supplementary Data 11 - HTT-HAP40 Δexon 1 ensemble models
DOI: 10.5281/zenodo.5514203
title: Swahili : News Classification Dataset

description: Swahili is spoken by 100-150 million people across East Africa. In Tanzania, it is one of two national languages (the other is English) and it is the official language of instruction in all schools. News in Swahili is an important part of the media sphere in Tanzania. News contributes to education, technology, and the economic growth of a country, and news in local languages plays an important cultural role in many Africa countries. In the modern age, African languages in news and other spheres are at risk of being lost as English becomes the dominant language in online spaces.<br> <br> The Swahili news dataset was created to reduce the gap of using the Swahili language to create NLP technologies and help AI practitioners in Tanzania and across Africa continent to practice their NLP skills to solve different problems in organizations or societies related to Swahili language. Swahili News were collected from different websites that provide news in the Swahili language. I was able to find some websites that provide news in Swahili only and others in different languages including Swahili.<br> <br> The dataset was created for a specific task of text classification, this means each news content can be categorized into six different topics (Local news, International news , Finance news, Health news, Sports news, and Entertainment news). The dataset comes with a specified train/test split. The train set contains 75% of the dataset and test set contains 25% of the dataset. <strong>Acknowledgment</strong>: This project was supported by the AI4D language dataset fellowship through K4All and Zindi Africa.
description: The news version contains both train and test sets.
description: {"references": ["https://www.k4all.org/project/language-dataset-fellowship/"]}
DOI: 10.5281/zenodo.4300293
title: Swahili : News Classification Dataset

description: Swahili is spoken by 100-150 million people across East Africa. In Tanzania, it is one of two national languages (the other is English) and it is the official language of instruction in all schools. News in Swahili is an important part of the media sphere in Tanzania. News contributes to education, technology, and the economic growth of a country, and news in local languages plays an important cultural role in many Africa countries. In the modern age, African languages in news and other spheres are at risk of being lost as English becomes the dominant language in online spaces.<br> <br> The Swahili news dataset was created to reduce the gap of using the Swahili language to create NLP technologies and help AI practitioners in Tanzania and across Africa continent to practice their NLP skills to solve different problems in organizations or societies related to Swahili language. Swahili News were collected from different websites that provide news in the Swahili language. I was able to find some websites that provide news in Swahili only and others in different languages including Swahili.<br> <br> The dataset was created for a specific task of text classification, this means each news content can be categorized into six different topics (Local news, International news , Finance news, Health news, Sports news, and Entertainment news). The dataset comes with a specified train/test split. The train set contains 75% of the dataset and test set contains 25% of the dataset. <strong>Acknowledgment</strong>: This project was supported by the AI4D language dataset fellowship through K4All and Zindi Africa.
description: The news version contains both train and test sets.
description: {"references": ["https://www.k4all.org/project/language-dataset-fellowship/"]}
DOI: 10.6084/m9.figshare.16570602.v2
title: Unusual SARS-CoV-2 intra-host diversity reveals lineages superinfection

description: Supplementary material of the paper "Unusual SARS-CoV-2 intra-host diversity reveals lineages superinfection".
DOI: 10.6084/m9.figshare.15010923
title: Podarcis liolepis transcriptome assembly

description: Transcriptome of Podarcis liolepis
DOI: 10.6084/m9.figshare.15010935.v1
title: Zootoca vivipara transcriptome assembly

description: Transcriptome assembly of Zootoca vivipara
DOI: 10.6084/m9.figshare.15010887
title: pEAGs table

description: Table of genes involved in abiotic environmental adaptation in a range of species, as well as their involvement in organismal stress response and a range of cellular functions. 2019 Version.
DOI: 10.6084/m9.figshare.15010872
title: Network_and_functions.cys

description: Cytoscape session file for environmental adaptation genes in Lacertidae lizards and other vertebrates. Contains functional enrichment analysis generated by ClueGo (you will need to install the ClueGo app and obtain a license key from within Cytoscape to view this)
DOI: 10.6084/m9.figshare.15010935
title: Zootoca vivipara transcriptome assembly

description: Transcriptome assembly of Zootoca vivipara
DOI: 10.6084/m9.figshare.15010872.v1
title: Network_and_functions.cys

description: Cytoscape session file for environmental adaptation genes in Lacertidae lizards and other vertebrates. Contains functional enrichment analysis generated by ClueGo (you will need to install the ClueGo app and obtain a license key from within Cytoscape to view this)
DOI: 10.6084/m9.figshare.15010923.v1
title: Podarcis liolepis transcriptome assembly

description: Transcriptome of Podarcis liolepis
DOI: 10.6084/m9.figshare.15010887.v1
title: pEAGs table

description: Table of genes involved in abiotic environmental adaptation in a range of species, as well as their involvement in organismal stress response and a range of cellular functions. 2019 Version.
DOI: 10.25345/c56r9c
title: MassIVE MSV000088113 - GNPS - FBMN of bovine submaxillary mucin with and without dialysis
title: Metabolomics results of bovine submaxillary mucin (BSM) and BSM after dialysis against a 10 kDa MW cutoff (dBSM). Includes: raw data, open source data, feature finding settings for MZmine, quantitative feature table, .mgf, and Cytoscape network file from feature-based molecular networking in GNPS. Metadata was uploaded as a Google Sheet. FBMN job ID: https://gnps.ucsd.edu/ProteoSAFe/status.jsp?task=d204e43fa2ac48fca99ca52ad268a193. Corresponds to thesis document Neve 2021 CU Anschutz.
DOI: 10.14272/tzhoouxjqhqali-uhfffaoysa-n.1
title: C22H29N5O2
title: InChI=1S/C22H29N5O2/c1-21(2,3)17-11-13-26(24-17)19(27-14-12-18(25-27)22(4,5)6)15-9-8-10-16(23-15)20(28)29-7/h8-14,19H,1-7H3

description: This dataset contains experimental data from a sample (InChI=1S/C22H29N5O2/c1-21(2,3)17-11-13-26(24-17)19(27-14-12-18(25-27)22(4,5)6)15-9-8-10-16(23-15)20(28)29-7/h8-14,19H,1-7H3). The datasets from the following experiments are available: 13C nuclear magnetic resonance spectroscopy (13C NMR) 1H nuclear magnetic resonance spectroscopy (1H NMR)
DOI: 10.14272/tzhoouxjqhqali-uhfffaoysa-n/chmo0000595
title: 13C nuclear magnetic resonance spectroscopy (13C NMR) ()
title: InChI=1S/C22H29N5O2/c1-21(2,3)17-11-13-26(24-17)19(27-14-12-18(25-27)22(4,5)6)15-9-8-10-16(23-15)20(28)29-7/h8-14,19H,1-7H3

description: dataset for 13C nuclear magnetic resonance spectroscopy (13C NMR) 13C NMR (100 MHz, CD2Cl2, ppm) δ = 165.4 (C-10), 164.0 (C-9, 2C), 156.6 (C-5), 148.5 (C-1), 138.7 (C-3), 130.4 (C-7, 2C), 126.1 (C-4), 125.6 (C-2), 103.7 (C-8, 2C), 79.0 (C-6), 53.3 (C-11), 32.7 (C-12, 2C), 30.8 (C-13, 6C).
DOI: 10.14272/tzhoouxjqhqali-uhfffaoysa-n/chmo0000593
title: 1H nuclear magnetic resonance spectroscopy (1H NMR) ()
title: InChI=1S/C22H29N5O2/c1-21(2,3)17-11-13-26(24-17)19(27-14-12-18(25-27)22(4,5)6)15-9-8-10-16(23-15)20(28)29-7/h8-14,19H,1-7H3

description: dataset for 1H nuclear magnetic resonance spectroscopy (1H NMR) 1H NMR (400 MHz, CD2Cl2, ppm) δ = 8.09 (d, 3J = 7.9 Hz, 1H, H-2), 7.88 (t, 3J = 7.9 Hz, 1H, H-3), 7.56 (s, 1H, H-6), 7.38 (d, 3J = 2.4 Hz, 2H, H-7), 7.21 (d, 3J = 7.9 Hz, 1H, H-4), 6.20 (d, 3J = 2.4 Hz, 2H, H-8), 3.96 (s, 3H, H-11), 1.28 (s, 18H, H-13).
DOI: 10.5281/zenodo.5339340
title: Infant Gray Matter Development

description: Source data associated with Infant gray matter development project. All source data and codes files are also available on Github: https://github.com/VPNL/babies_graymatter
DOI: 10.6084/m9.figshare.14265191
title: Support material to investigate how software practitioners see app user reviews to think of requirements

description: This technical report presents the data we collected in the study we conducted to investigate how software practitioners see app user reviews do think of requirements. We also included the artifacts used to collect the data in order to make replication possible. Six practitioners from the industry with experience in requirements elicitation participated in the study. They interacted with the tool we developed to extract the most relevant terms and reviews. The participants were asked to analyze the reviews from Kahoot!, an educational app available in Google Play Store, and think of requirements for improving the app or developing concurrent applications.
DOI: 10.6084/m9.figshare.14265191.v1
title: Support material to investigate how software practitioners see app user reviews to think of requirements

description: This technical report presents the data we collected in the study we conducted to investigate how software practitioners see app user reviews do think of requirements. We also included the artifacts used to collect the data in order to make replication possible. Six practitioners from the industry with experience in requirements elicitation participated in the study. They interacted with the tool we developed to extract the most relevant terms and reviews. The participants were asked to analyze the reviews from Kahoot!, an educational app available in Google Play Store, and think of requirements for improving the app or developing concurrent applications.
DOI: 10.6084/m9.figshare.16639480.v1
title: REMPinv.dat

description: Dataset for measurement invariance testing
DOI: 10.6084/m9.figshare.16639480.v3
title: Data and Code for RES-11 Scale Validation

description: STATA dataset for tablesMPlus dataset for EFA/CFAMPlus dataset for measurement invariance testingSTATA Code for Tables 1 & 2MPlus Code for measurement invariance testing
DOI: 10.6084/m9.figshare.16639480.v2
title: REMPinv.dat

description: STATA dataset for tablesMPlus dataset for EFA/CFAMPlus dataset for measurement invariance testingSTATA Code for Tables 1 & 2MPlus Code for measurement invariance testing
DOI: 10.5281/zenodo.5514356
title: Dataset_Guinoiseau_et_al_2021_Geophysical_Research_Letters

description: The Excel spreadsheet reports the dataset associated with the article entitled "Tropical weathering history recorded in the silicon isotopes of lateritic weathering profiles" and published in Geophysical Research Letters by Guinoiseau and coauthors.
DOI: 10.5281/zenodo.5514355
title: Dataset_Guinoiseau_et_al_2021_Geophysical_Research_Letters

description: The Excel spreadsheet reports the dataset associated with the article entitled "Tropical weathering history recorded in the silicon isotopes of lateritic weathering profiles" and published in Geophysical Research Letters by Guinoiseau and coauthors.