cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6407122
title: Aligned DNA sequence matrix for phylogenetic analyses in the article "Dos nuevas especies del grupo Pristimantis boulengeri (Anura: Strabomantidae) de la cuenca alta del río Napo, Ecuador" by Bejarano, et al.

description: Matrix in nexus format that include sequences of 16S (1-1295), RAG1 (1296-1922), 12S (1923-3306), and COI (3307-3984) for 97 specimens belonging to the genus <em>Pristimantis</em>, in addition to specimens of <em>Strabomantis</em> and <em>Niceforonia</em> as outgroups.
DOI: 10.5281/zenodo.6407121
title: Aligned DNA sequence matrix for phylogenetic analyses in the article "Dos nuevas especies del grupo Pristimantis boulengeri (Anura: Strabomantidae) de la cuenca alta del río Napo, Ecuador" by Bejarano, et al.

description: Matrix in nexus format that include sequences of 16S (1-1295), RAG1 (1296-1922), 12S (1923-3306), and COI (3307-3984) for 97 specimens belonging to the genus <em>Pristimantis</em>, in addition to specimens of <em>Strabomantis</em> and <em>Niceforonia</em> as outgroups.
DOI: 10.22003/xfel.eu-data-002787-00
title: Controlling potential energy landscapes in Fe-based molecular photosensitizers by solvent acceptor number
DOI: 10.22003/xfel.eu-data-002873-00
title: Charge transfer and photofragmentation in hydrogen bonded pyrrole-water clusters upon site-specific x-ray photoionization
DOI: 10.22003/xfel.eu-data-003220-00
title: HERCULES 2022 - X-ray Scattering and Imaging Experiments at MID - Group A
DOI: 10.6073/pasta/e09a8f2b997f5e777255cbb890bb39fa
title: Large consumer isotope values, Shark River Slough, Everglades National Park (FCE LTER), Florida, USA, May 2005 - ongoing

description: This dataset provides information on the stable isotope values from multiple tissues from various consumers (especially bull sharks and American alligators) sampled within the Shark River Slough.
DOI: 10.6084/m9.figshare.19390700.v2
title: Results for the Zooniverse Fishing in the past project.

description: These are the results for the zooniverse project: "Fishing in the Past". A detailed report of the project can be found in the Brill publication: xxxx (in press). The zooniverse project can be found at https://www.zooniverse.org/projects/anneoverduin/fishing-in-the-past<br>This dataset is part of a research investigating fish species depicted in early modern art in the Lower Countries
DOI: 10.6084/m9.figshare.3761562.v2175
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.19497548
title: Table 1

description: Table with fish species used as choices within the zooniverse project "Fishing in the past"
DOI: 10.6084/m9.figshare.19497548.v1
title: Table 1

description: Table with fish species used as choices within the zooniverse project "Fishing in the past"
DOI: 10.34740/kaggle/dsv/3394234
title: Sensor Based Aquaponics Fish Pond Datasets
DOI: 10.6084/m9.figshare.19494911.v3
title: Division by Zero: Threats and Effects in Spectrum-Based Fault Localization Formulas Experiments and Data

description: The scripts are in the compressed file.
DOI: 10.6084/m9.figshare.19494911.v2
title: Division by Zero: Threats and Effects in Spectrum-Based Fault Localization Formulas Experiments and Data

description: The scripts are in the compressed file.
DOI: 10.3886/e162061
title: Mexican medical research database.

description: This database results from retrieving bibliometric information from the Web of Science database; therefore, we used a query line to extract medical-related documents published by Mexican Authors. We cleaned the database and enriched it with different techniques (NLP, Cluster Analysis, temporal analysis, and manual curation). <br>The specific query is as follows: CU=Mexico AND (SU=ANATOMY OR SU=MEDICAL ETHICS OR SU=BIOLOGY OR SU=GENETICS OR SU=MICROBIOLOGY OR SU=BIOPHYSICS OR SU=NEUROLOGY OR SU=DENTISTRY OR SU=ONCOLOGY OR SU=DERMATOVENEROLOGY OR SU=OPHTHALMOLOGY OR SU=EPIDEMIOLOGY OR SU=OTOLARYNGOLOGY OR SU=FORENSIC MEDICINE OR SU=PATHOLOGY OR SU=GYNECOLOGY OR SU=OBSTETRICS OR SU=PEDIATRICS OR SU=HISTOLOGY OR SU=EMBRYOLOGY OR SU=PHARMACOLOGY OR SU=HYGIENE OR SU=PHYSIOLOGY OR SU=PATOPHYSIOLOGY OR SU=BIOCHEMISTRY OR SU=PSYCHOLOGY OR SU=PSYCHIATRICS OR SU=IMMUNOLOGY OR SU=RADIOLOGY OR SU=INFECTIOUS DISEASES OR SU=SOCIAL MEDICINE OR SU=TELEMEDICINE OR SU=SPORTS MEDICINE OR SU=INTERNAL MEDICINE OR SU=SURGERY)<br><br>Data is stored in .csv; codified in UTF-8; tab separated; UNIX (LF) linebreak; String delimiter "Multiple values are separated using "***"<br>Fields:--------<br>AB: abstract<br>C1: Authors' address<br>AU: Authors <br>DE: Author keywords <br>ID: KeyWords Plus AD_1: detected institutions<br>TERMS: detected terms <br>Cluster_AD_1: resulting clusters of detected institutions <br>Cluster_TERMS: resulting clusters of detected terms Cluster_AD_1-TERMS: resulting clusters of co-ocurrence of institution's and terms' clusters. Periods: detected time periods <br>PY: Publication Year<br>TI: Tittle <br>Z9: Total number of times cited (Web of Science Main Collection, Arabic Citation Index, BIOSIS Citation Index, Chinese Science Citation Database, Data Citation Index, Russian Science Citation Index, SciELO Citation Index)<br><br><br><br><br><br><br><br>
DOI: 10.3886/e162061v3
title: Mexican medical research database.

description: This database results from retrieving bibliometric information from the Web of Science database; therefore, we used a query line to extract medical-related documents published by Mexican Authors. We cleaned the database and enriched it with different techniques (NLP, Cluster Analysis, temporal analysis, and manual curation). <br>The specific query is as follows: CU=Mexico AND (SU=ANATOMY OR SU=MEDICAL ETHICS OR SU=BIOLOGY OR SU=GENETICS OR SU=MICROBIOLOGY OR SU=BIOPHYSICS OR SU=NEUROLOGY OR SU=DENTISTRY OR SU=ONCOLOGY OR SU=DERMATOVENEROLOGY OR SU=OPHTHALMOLOGY OR SU=EPIDEMIOLOGY OR SU=OTOLARYNGOLOGY OR SU=FORENSIC MEDICINE OR SU=PATHOLOGY OR SU=GYNECOLOGY OR SU=OBSTETRICS OR SU=PEDIATRICS OR SU=HISTOLOGY OR SU=EMBRYOLOGY OR SU=PHARMACOLOGY OR SU=HYGIENE OR SU=PHYSIOLOGY OR SU=PATOPHYSIOLOGY OR SU=BIOCHEMISTRY OR SU=PSYCHOLOGY OR SU=PSYCHIATRICS OR SU=IMMUNOLOGY OR SU=RADIOLOGY OR SU=INFECTIOUS DISEASES OR SU=SOCIAL MEDICINE OR SU=TELEMEDICINE OR SU=SPORTS MEDICINE OR SU=INTERNAL MEDICINE OR SU=SURGERY)<br><br>Data is stored in .csv; codified in UTF-8; tab separated; UNIX (LF) linebreak; String delimiter "Multiple values are separated using "***"<br>Fields:--------<br>AB: abstract<br>C1: Authors' address<br>AU: Authors <br>DE: Author keywords <br>ID: KeyWords Plus AD_1: detected institutions<br>TERMS: detected terms <br>Cluster_AD_1: resulting clusters of detected institutions <br>Cluster_TERMS: resulting clusters of detected terms Cluster_AD_1-TERMS: resulting clusters of co-ocurrence of institution's and terms' clusters. Periods: detected time periods <br>PY: Publication Year<br>TI: Tittle <br>Z9: Total number of times cited (Web of Science Main Collection, Arabic Citation Index, BIOSIS Citation Index, Chinese Science Citation Database, Data Citation Index, Russian Science Citation Index, SciELO Citation Index)<br><br><br><br><br><br><br><br>
DOI: 10.6084/m9.figshare.19497653
title: MCMC Algorithms for Posteriors on Matrix Spaces

description: We study Markov chain Monte Carlo (MCMC) algorithms for target distributions defined on matrix spaces. Such an important sampling problem has yet to be analytically explored. We carry out a major step in covering this gap by developing the proper theoretical framework that allows for the identification of ergodicity properties of typical MCMC algorithms, relevant in such a context. Beyond the standard Random-Walk Metropolis (RWM) and preconditioned Crank–Nicolson (pCN), a contribution of this paper in the development of a novel algorithm, termed the ‘Mixed’ pCN (MpCN). RWM and pCN are shown <i>not</i> to be geometrically ergodic for an important class of matrix distributions with heavy tails. In contrast, MpCN is robust across targets with different tail behaviour and has very good empirical performance within the class of heavy-tailed distributions. Geometric ergodicity for MpCN is not fully proven in this work, as some remaining drift conditions are quite challenging to obtain owing to the complexity of the state space. We do, however, make a lot of progress towards a proof, and show in detail the last steps left for future work. We illustrate the computational performance of the various algorithms through numerical applications, including calibration on real data of a challenging model arising in financial statistics.
DOI: 10.6084/m9.figshare.19497653.v1
title: MCMC Algorithms for Posteriors on Matrix Spaces

description: We study Markov chain Monte Carlo (MCMC) algorithms for target distributions defined on matrix spaces. Such an important sampling problem has yet to be analytically explored. We carry out a major step in covering this gap by developing the proper theoretical framework that allows for the identification of ergodicity properties of typical MCMC algorithms, relevant in such a context. Beyond the standard Random-Walk Metropolis (RWM) and preconditioned Crank–Nicolson (pCN), a contribution of this paper in the development of a novel algorithm, termed the ‘Mixed’ pCN (MpCN). RWM and pCN are shown <i>not</i> to be geometrically ergodic for an important class of matrix distributions with heavy tails. In contrast, MpCN is robust across targets with different tail behaviour and has very good empirical performance within the class of heavy-tailed distributions. Geometric ergodicity for MpCN is not fully proven in this work, as some remaining drift conditions are quite challenging to obtain owing to the complexity of the state space. We do, however, make a lot of progress towards a proof, and show in detail the last steps left for future work. We illustrate the computational performance of the various algorithms through numerical applications, including calibration on real data of a challenging model arising in financial statistics.
DOI: 10.5281/zenodo.6407062
title: Processed and additional data for our publication titled "Endoplasmic reticulum stress activates human IRE1α through reversible assembly of inactive dimers into small oligomers"

description: This is an updated version of our original data archive (which can be found under the doi 10.5281/zenodo.5513025) that reflects changes we've made to the manuscript over the course of the review process and incorporates the new data we've collected since the time of the initial bioRxiv submission. This data archive contains all raw data EXCEPT for single-particle microscopy movies (which are deposited separately due to their size) for our paper titled "Endoplasmic reticulum stress activates human IRE1a through reversible assembly of inactive dimers into small oligomers". These raw data are stored in "non_SPT_data_final_v2.zip". Additionally, full plasmid sequences for all plasmids used in this paper are stored in GenBank format in the file "plasmid_sequences_v2.zip". Finally, this repository contains processed single-particle movies in the form of dual-color tracks from the TrackMate ImageJ plugin in XML format (file: "SPT_processed_data_and_settings_final_v2.zip"). The processed XML tracks are organized in the same way as the raw data files in the separate repository. They are sorted into subfolders by date of acquisition first, followed by experimental conditions. To recreate the figures from the paper, follow instructions in the README.md file included with the source code repository and use the JSON settings files saved here under "analysis_settings".
DOI: 10.5281/zenodo.5513024
title: Processed and additional data for our publication titled "Endoplasmic reticulum stress activates human IRE1α through reversible assembly of inactive dimers into small oligomers"

description: This is an updated version of our original data archive (which can be found under the doi 10.5281/zenodo.5513025) that reflects changes we've made to the manuscript over the course of the review process and incorporates the new data we've collected since the time of the initial bioRxiv submission. This data archive contains all raw data EXCEPT for single-particle microscopy movies (which are deposited separately due to their size) for our paper titled "Endoplasmic reticulum stress activates human IRE1a through reversible assembly of inactive dimers into small oligomers". These raw data are stored in "non_SPT_data_final_v2.zip". Additionally, full plasmid sequences for all plasmids used in this paper are stored in GenBank format in the file "plasmid_sequences_v2.zip". Finally, this repository contains processed single-particle movies in the form of dual-color tracks from the TrackMate ImageJ plugin in XML format (file: "SPT_processed_data_and_settings_final_v2.zip"). The processed XML tracks are organized in the same way as the raw data files in the separate repository. They are sorted into subfolders by date of acquisition first, followed by experimental conditions. To recreate the figures from the paper, follow instructions in the README.md file included with the source code repository and use the JSON settings files saved here under "analysis_settings".
DOI: 10.5281/zenodo.6407225
title: Probing Heterodimer and Multi-adsorbate Hydrocarbon Adsorption Trends in the MFI Framework

description: Ground-state geometries for all adsorbates heterodimer pairs and multiple adsorbate hydrocarbon sets as part of the Supplementary Information document for the manuscript titled 'Probing Heterodimer and Multi-adsorbate Hydrocarbon Adsorption Trends in the MFI Framework'.
DOI: 10.5281/zenodo.6407224
title: Probing Heterodimer and Multi-adsorbate Hydrocarbon Adsorption Trends in the MFI Framework

description: Ground-state geometries for all adsorbates heterodimer pairs and multiple adsorbate hydrocarbon sets as part of the Supplementary Information document for the manuscript titled 'Probing Heterodimer and Multi-adsorbate Hydrocarbon Adsorption Trends in the MFI Framework'.
DOI: 10.5281/zenodo.6407201
title: BMP_outline_analysis_beetle_bug

description: BMP files used for the outline analysis of beetles and true bugs.
DOI: 10.5281/zenodo.6407200
title: BMP_outline_analysis_beetle_bug

description: BMP files used for the outline analysis of beetles and true bugs.
DOI: 10.17632/dp3f425kkf.5
title: Active Pharmaceutical Ingredients from Brazilian Pharmacopeia in PDBQT format, for docking with AutoDock Vina Tools

description: Active Pharmaceutical Ingredients (APIs) are molecules that can be used for the manufacturing of Drugs. The Brazilian Health Regulatory Agency (Agência Nacional de Vigilância Sanitária) is responsible for the oversight and approval of production and distribution of all drugs in Brazilian territory. The dataset containing PDBQT format files, with correct protonation states for pH 7.4 is useful for in silico molecular docking with AutoDock e Vina Tools.
DOI: 10.17632/nbd83424kc.1
title: Normalized probabilities of structural parameters for CG ssDNAs

description: Normalized probability distributions of virtual bond lengths, bond angles, and dihedral angles for the coarse-grained single-stranded DNA structures
DOI: 10.17632/tgccvhzzft.1
title: Bread data set

description: Original dataset of the article "Defining and Predicting Consumers' Bread Choices based on Socio-Demographic Characteristics and Healthy Living Orientation"
DOI: 10.17632/zggw58tdzr.1
title: Replication codes and data for "What Moves Treasury Yields?"

description: Replication files for “What Moves Treasury Yields?” 
by Emanuel Moench (e.moench@fs.de) and Soroosh Soofi-Siavash (ssoofi.siavash@gmail.com)
DOI: 10.17632/98p49gmm5v.2
title: Compliance to guidelines and rational use of antibiotics in urinary tract infections in Lebanon: a cross-sectional study

description: Urinary Tract Infections (UTI) are among the most common bacterial infections, and appropriate antimicrobial therapy with agents that maximize success and minimize resistance is crucial. Despite international concern, adherence to guidelines is still suboptimal.

Objectives: Determine the rate of conformity to guidelines among Lebanese physicians in antibiotic prescriptions for the outpatient treatment of UTIs in adults; and detect the factors that are associated with a higher rate of non-compliance to guidelines.

Methods: Patient-related characteristics and the prescribed course of antibiotics were gathered from patients' medical files, and a questionnaire was directed to physicians to elicit the factors likely to be involved in decision-making. Prescriptions were evaluated using 4 criteria: Molecule conformity, Daily Dose conformity, Duration conformity, and Global conformity.
DOI: 10.17632/5ydxbt5m49.2
title: Dataset of Risk of Fear and Anxiety in Utilising Health App Surveillance Due to COVID-19: Gender Differences Analysis

description: The data presented in this article is used to highlights the psychological determinants stemming from the COVID-19 pandemic that affect the usage of a mobile health app. The 738 records were gathered in Saudi Arabia using an online survey to collect data. The study followed a cross-sectional design and adopted a snowball sampling technique to collect the data. A statistical analysis of the dataset was analyzed using partial least squares (PLS-SEM). This data shows a significant association between perceived usefulness, perceived ease of use, event-related fear and Tabaud App intention. The relationships between Tabaud App intention and COVID-19 anxiety on Tabaud App usage were also revealed. The study found a significant association between perceived ease of use and perceived usefulness. Additionally, the multi-group analysis showed that only two paths related to Tabaud App intention, perceived ease of use and perceived usefulness, differed significantly between males and females. Additionally, women experienced anxiety disorders more than men. For further interpretation and findings, please refer to the research paper entitled “Risk of Fear and Anxiety in Utilising Health App Surveillance Due to COVID-19: Gender Differences Analysis”
DOI: 10.5281/zenodo.6407203
title: SCOUT in vivo Data

description: Data and analysis for <em>in vivo</em> recordings associated with SCOUT.
DOI: 10.5281/zenodo.6407202
title: SCOUT in vivo Data

description: Data and analysis for <em>in vivo</em> recordings associated with SCOUT.
DOI: 10.17632/73d858znym.1
title: Dataset (Vasilchenko A.E.)

description: This research studies the effect of advertising on stock returns both in the short run and in the long run. We find that a greater amount of advertising is associated with a larger stock return in the advertising year but a smaller stock return in the year subsequent to the advertising year (during COVID-19).
A firm's advertising spend can be an important signal to investors as it indicates a firm's ability to deploy the resources needed to attract new customers and/or enhance its value proposition for existing customers, but this conclusion is not always the same for firms with "strong" and " weak" brands. However, this article focuses on the impact of the economic downturn due to the pandemic on the activities of companies, since such a situation can lead to a reshuffling of forces in the market.
Conducting research in this area at the intersection of marketing and finance will definitely be a significant contribution, giving an answer to the question of whether companies should increase investment in marketing strategies in difficult times, and, if the answer is yes, this will be another powerful argument in in favor of justifying advertising spending by consumer firms during such crises, even if this strategy seems painful in the face of financial pressure and there is an outflow among consumers, the main stakeholders of consumer market firms.
DOI: 10.17632/mw9y5624wn.1
title: Tradetheory

description: This data set has been able to support the results of the particular analysis for the research entitled "The Pattern of International Trade between Bangladesh and USA: Heckscher-Ohlin and Rybczynski Analysis"
DOI: 10.17632/rk8pjbghct.1
title: Annotated Indonesian Tweets Dataset containing Abusive Words for Sentiment Analysis

description: 999 Indonesian tweets containing abusive words, manually tagged with positive and negative sentiment. Along with this is a list of 20 abusive words frequently used in Indonesian tweets.
DOI: 10.17632/y3rxs6984x.2
title: Spectral Data for 2-(4-fluorophenyl)-3-(5-methylisoxazol-3-yl)thiazolidin-4-one

description: Spectral Data for 2-(4-fluorophenyl)-3-(5-methylisoxazol-3-yl)thiazolidin-4-one
DOI: 10.17632/2r7jhhrzth.1
title: LINF_250017100

description: DnaJ domain-containing protein | JDP46 | J46
Leishmania infantum (strain JPCM5)
DOI: 10.17632/2zmrjf73tt.1
title: LINF_250017000 

description: magnesium transporter protein 2 | MGT2
Leishmania infantum (strain JPCM5)
DOI: 10.17632/mywr489nhb.1
title: LINF_250016900

description: RNA recognition motif containing protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/wxs3hdvbch.1
title: Exploring the participants experience of median nerve mobilization on spasticity and improving upper limb strength in individuals with stroke: A Mixed method study

description: Background:  Spasticity after stroke is common that affect upper limb strength and make activities of daily living difficult. There are many techniques but not any standardized technique for long term effect on reduction of spasticity and improving upper limb strength. This study aimed to explore and understand the effectiveness of neural mobilization on spasticity and upper limb strength in individuals with stroke.
Method: This is mixed method approach of embedded design, multicentric study recruited 7 individuals with stroke as no new themes or codes were emerging (data saturated). Median nerve mobilization was given 20 oscillations per minute for 3 times & repeated 3 times with a pause of 1 minute between each sets for 5times/week for 4weeks. Outcome measures were Modified Ashworth Scale (MAS), Brunnstrom’s grading of hand recovery and Hydraulic hand dynamometer(HHD) for grip and pinch strength. Pre and post outcomes data were collected at baseline and 4weeks after intervention and in depth face to face structured interviews were conducted after 4weeks of intervention to explore the effectiveness of median nerve mobilization on reduction of spasticity and the improvement of upper limb strength.
Results: There was a significant improvement in all the quantitative outcome measures MAS, Brunnstrom grading and HHD with p <0.05 in each outcome. In qualitative, five major themes and 26 subthemes were identified: (1) Spasticity & Mobility, (2) Motor recovery, (3) Enhanced interpersonal interactions, (4) Psychological benefits, (5) Overall well-being. Overall participants described decreased assistance in ADL’s, able to hold and lift the objects, increased usage of affected hand and other 23 subthemes.
Conclusion: This study provides new knowledge about the benefits of more potentiate intervention for reduction of spasticity and improving upper limb strength in individuals with stroke for future implementation in clinical practice.
DOI: 10.17632/b935tf7cpt.1
title: Dataset of 'Multiphase simulations and experiments of subaqueous granular collapse on an inclined plane in densely packed conditions: Effects of particle size and initial concentration'

description: The dataset is part of the study, titled "Multiphase simulations and experiments of subaqueous granular collapse on an inclined plane in densely packed conditions: Effects of particle size and initial concentration" (DOI: 10.1103/PhysRevFluids.00.004300).

Figure02 contains the animations of landslide processes for Cases F60, M60, C60, and VC60.