cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.y9tc2f
title: Occurrence Download

description: A dataset containing 112 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ploceus cucullatus",
 "Country is Sao Tome and Principe",
 "HasCoordinate is true"
 ]
}

 The dataset includes 112 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044417-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26023/n77t-hrhs-9n0d
title: BAMEX: Indiana Purdue Automated Agricultural Weather Station Network. Version 1.0

description: This data set contains 30-minute resolution surface meteorological data from the Purdue Automated Agricultural Weather Station (PAAWS) Network. This network includes 7 stations around the state of Indiana. This data set covers the period from 20 May to 8 July 2003. These data are in columnar ASCII format. The PAAWS network is a system of remote automatic weather stations located at each of the eight regional Purdue Agricultural Research Centers (ARCs) throughout Indiana and the Purdue Agronomy Research Center. The purpose of the network is to continuously measure weather elements of special interest to Purdue agricultural researchers.
DOI: 10.26023/zqez-ensf-t09
title: BAMEX: Texas Natural Resources Conservation Commission. Version 1.0

description: This data set contains hourly resolution surface meteorological data from the Texas Natural Resources Conservation Commission (TNRCC) Air Quality Monitoring Network. This network includes a number of stations around the state of Texas. This data set covers the period from 20 May to 31 July 2003. These data are in comma-delimited ASCII format.
DOI: 10.15468/dl.qnzchv
title: Occurrence Download

description: A dataset containing 926082 species occurrences available in GBIF matching the query:
(Query is too complex. Can be viewed on the landing page)

 The dataset includes 926082 records from 1069 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044323-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26737455
title: Additional file 4 of Influenza virus infection exacerbates gene expression related to neurocognitive dysfunction in brains of old mice

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.26737455.v1
title: Additional file 4 of Influenza virus infection exacerbates gene expression related to neurocognitive dysfunction in brains of old mice

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.26082702
title: Additional file 2 of FMR1 allelic complexity in premutation carriers provides no evidence for a correlation with age at amenorrhea

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26082702.v1
title: Additional file 2 of FMR1 allelic complexity in premutation carriers provides no evidence for a correlation with age at amenorrhea

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26082616
title: Additional file 1 of Rare histologic transformation of a CTNNB1 (β-catenin) mutated prostate cancer with aggressive clinical course

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26082616.v1
title: Additional file 1 of Rare histologic transformation of a CTNNB1 (β-catenin) mutated prostate cancer with aggressive clinical course

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26082719
title: Additional file 2 of Amplifications of EVX2 and HOXD9-HOXD13 on 2q31 in mature cystic teratomas of the ovary identified by array comparative genomic hybridization may explain teratoma characteristics in chondrogenesis and osteogenesis

description: Supplementary Material 2: Chromosomal aberrations on array comparative genomic hybridization (aCGH) analysis present 4 to 6 teratomas
DOI: 10.6084/m9.figshare.26082719.v1
title: Additional file 2 of Amplifications of EVX2 and HOXD9-HOXD13 on 2q31 in mature cystic teratomas of the ovary identified by array comparative genomic hybridization may explain teratoma characteristics in chondrogenesis and osteogenesis

description: Supplementary Material 2: Chromosomal aberrations on array comparative genomic hybridization (aCGH) analysis present 4 to 6 teratomas
DOI: 10.6084/m9.figshare.26082720
title: Additional file 2 of Correlation between hemoglobin and the risk of common malignant tumors: a 1999–2020 retrospective analysis and causal association analysis

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26082720.v1
title: Additional file 2 of Correlation between hemoglobin and the risk of common malignant tumors: a 1999–2020 retrospective analysis and causal association analysis

description: Supplementary Material 2
DOI: 10.15468/dl.uhjrz8
title: Occurrence Download

description: A dataset containing 1808 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-85.93585 7.78439,-82.89359 7.78439,-82.89359 11.15029,-85.93585 11.15029,-85.93585 7.78439))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Tapirus bairdii (Gill, 1865)"
 ]
}

 The dataset includes 1808 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072982-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26737629
title: Additional file 3 of Longitudinal metabolomics of human plasma reveal metabolic dynamics and predictive markers of antituberculosis drug-induced liver injury

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26737629.v1
title: Additional file 3 of Longitudinal metabolomics of human plasma reveal metabolic dynamics and predictive markers of antituberculosis drug-induced liver injury

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26737734
title: Additional file 28 of Exploring the mediating role of calcium homeostasis in the association between diabetes mellitus, glycemic traits, and vascular and valvular calcifications: a comprehensive Mendelian randomization analysis

description: Supplementary Material 28.
DOI: 10.6084/m9.figshare.26737734.v1
title: Additional file 28 of Exploring the mediating role of calcium homeostasis in the association between diabetes mellitus, glycemic traits, and vascular and valvular calcifications: a comprehensive Mendelian randomization analysis

description: Supplementary Material 28.
DOI: 10.6084/m9.figshare.26085185
title: Additional file 2 of Relationship between body mass index and residential segregation in large cities of Latin America

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.26085185.v1
title: Additional file 2 of Relationship between body mass index and residential segregation in large cities of Latin America

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.26085104
title: Additional file 1 of Single-cell landscape of immunological responses in elderly patients with sepsis

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.26085104.v1
title: Additional file 1 of Single-cell landscape of immunological responses in elderly patients with sepsis

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.26085200
title: Additional file 2 of Identification of lipid-modifying drug targets for autoimmune diseases: insights from drug target mendelian randomization

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26085200.v1
title: Additional file 2 of Identification of lipid-modifying drug targets for autoimmune diseases: insights from drug target mendelian randomization

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26085080.v1
title: Additional file 1 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 1: complete list of differentially methylated region (DMR) with | Δβ| &gt; 0.05. The file is divided in three table, one for each comparison.
DOI: 10.6084/m9.figshare.26085080
title: Additional file 1 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 1: complete list of differentially methylated region (DMR) with | Δβ| &gt; 0.05. The file is divided in three table, one for each comparison.
DOI: 10.6084/m9.figshare.26085208
title: Additional file 2 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 2: significant networks of genes (from Ingenuity pathway analysis) associated with the analysis of DMRs. The file is divided in three table, one for each comparison.
DOI: 10.6084/m9.figshare.26085208.v1
title: Additional file 2 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 2: significant networks of genes (from Ingenuity pathway analysis) associated with the analysis of DMRs. The file is divided in three table, one for each comparison.
DOI: 10.6084/m9.figshare.26737914
title: Additional file 3 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 3: list of transcription factors. The file is divided in three table, one for each comparison.
DOI: 10.6084/m9.figshare.26737914.v1
title: Additional file 3 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 3: list of transcription factors. The file is divided in three table, one for each comparison.
DOI: 10.6084/m9.figshare.26737917
title: Additional file 4 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 4: complete list of differentially methylated CpG sites with | Δβ| &gt; 0.1. The file is divided in up- and down-methylated CpG for the CTPP vs CTP comparison.
DOI: 10.6084/m9.figshare.26737917.v1
title: Additional file 4 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 4: complete list of differentially methylated CpG sites with | Δβ| &gt; 0.1. The file is divided in up- and down-methylated CpG for the CTPP vs CTP comparison.
DOI: 10.6084/m9.figshare.26737923
title: Additional file 6 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 6: list of transcription factors for the comparison between CTPP vs CTP groups and CPP vs CTP groups.
DOI: 10.6084/m9.figshare.26737923.v1
title: Additional file 6 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 6: list of transcription factors for the comparison between CTPP vs CTP groups and CPP vs CTP groups.
DOI: 10.6084/m9.figshare.26737926
title: Additional file 7 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 7: Significant networks of genes (from Ingenuity pathway analysis) associated with the analysis of DMPs detected in the comparison between CTPP vs CTP groups.
DOI: 10.6084/m9.figshare.26737926.v1
title: Additional file 7 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 7: Significant networks of genes (from Ingenuity pathway analysis) associated with the analysis of DMPs detected in the comparison between CTPP vs CTP groups.
DOI: 10.6084/m9.figshare.26737929
title: Additional file 8 of Methylome analysis in girls with idiopathic central precocious puberty

description: Additional file 8: complete list of differentially methylated CpG sites with | Δβ| &gt; 0.1. The file is divided in up- and down-methylated CpG for the CTPP vs CTP comparison.
DOI: 10.13145/bacdive6736.20241212.9.2
title: Legionella yabuuchiae Kuroki et al. 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6737.20241212.9.2
title: Legionella impletisoli Kuroki et al. 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6738.20241212.9.2
title: Legionella birminghamensis Wilkinson et al. 1988

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6739.20241212.9.2
title: Legionella brunensis Wilkinson et al. 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6740.20241212.9.2
title: Legionella cincinnatiensis Thacker et al. 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6741.20241212.9.2
title: Legionella jordanis Cherry et al. 1982

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive6742.20241212.9.2
title: Legionella moravica Wilkinson et al. 1989

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15468/dl.nsxbne
title: Occurrence Download

description: A dataset containing 23996533 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 "year",
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, "year")) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, "year")) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, "year")) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, "year")) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, "year")) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, "year")) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.occurrencestatus = 'PRESENT'
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND NOT occurrence.basisofrecord IN ('FOSSIL_SPECIMEN', 'LIVING_SPECIMEN')
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 occurrence."year"

 The dataset's 23996533 records were derived from 58423 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010053-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/dtz78w24x8.1
title: Smart City, Cybersecurity

description: Thi data was use to develops a Cybersecurity Debt Score (CDS) to evaluate cities’ governance alignment across policy cycles.
DOI: 10.17632/854pn8b3kv.1
title: Does Public Data Openness Reduce Boundary Pollution? Evidence from Interprovincial Neighboring Cities in China

description: Description:
This repository contains the replication materials for the study investigating the impact of public data openness on boundary pollution and firm performance in China. The main analysis is based on a panel dataset of inter-provincial boundary cities. The files included are:

do: A Stata DO file containing the complete code for data processing and regression analysis.

city_border: A panel dataset of inter-provincial boundary cities (2008–2021), used for the main empirical analysis.

city_all: A panel dataset covering all prefecture-level cities in China.

firm_border: A panel dataset of industrial firms located in boundary regions.

These materials are provided to ensure the transparency and reproducibility of the study.
DOI: 10.17632/pj9tkpn7vm.1
title: Effects of Ketamine on Postoperative Cognition: A Scoping Review Dataset

description: This dataset was compiled to investigate the effects of ketamine on postoperative cognitive function in human study participants. It comprises data from 58 clinical trials and retrospective cohort analyses that were published prior to 2025-Feb-15 and met two key criteria: (1) administration of racemic (R,S) ketamine, esketamine, or arketamine to adult surgical patients, and (2) reporting of postoperative cognitive evaluation. Data points for each study include aspects of study design, patient demographic characteristics, surgical procedures, ketamine administration protocols, and the methods and outcomes of cognitive assessment.
DOI: 10.17632/9ts2bjjrbs
title: Genotype Dataset of CYP27A1, CYP2R1, and GC Variants in Kazakhstani Patients with Type 2 Diabetes and Normoglycemic Controls for Diabetic Kidney Disease Risk Assessment

description: Given vitamin D’s roles in glucose metabolism and renal function, the study investigated associations between common variants in vitamin D pathway genes (CYP27A1, CYP2R1, GC) and diabetic kidney disease (DKD) risk. This case-control study included individuals with type 2 diabetes, both with and without DKD, as well as normoglycemic healthy controls. Four single nucleotide polymorphisms (SNPs) in the CYP27A1 (rs17470271), CYP2R1 (rs1074165), and GC (rs4588 and rs7041) were genotyped using real-time PCR with defined clusters. These findings suggest that individual variants in vitamin D pathway genes may serve as potential genetic markers for DKD risk stratification. In addition, haplotype analysis may offer complementary insight into genetic contributions to disease susceptibility.
DOI: 10.15156/bio/sh0204645.10fu
title: SH0204645.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0204646.10fu
title: SH0204646.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0204647.10fu
title: SH0204647.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0204648.10fu
title: SH0204648.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0204649.10fu
title: SH0204649.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.