cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/5cxw9f5ngz.1
title: Soil Metagenomics Analysis in Relation to Basal Stem Rot Disease

description: 16S Metagenomics soil analysis was conducted in three different estates (Kam Cheong Plantation, Ladang Sahabat, Warisan Gagah) in Sabah, Malaysia to understand the soil microbial community in disease free, low and high basal stem rot disease respectively.
DOI: 10.17632/bdwcgmvttk.2
title: Research Article-Electrochemical Investigation into the interaction of Fe(II) and Fe(III) with Tau Protein-Potential Implications for Alzheimer’s Disease

description: Tau, a family of microtubule-associated protein that exists in six isoforms, is involved in the etiology of Alzheimer’s and upon hypophosphorylation gives rise to neurofibrillary tangles inside neurons. Here, we report the results of an electrochemical investigation into the interaction of Fe(II) and Fe(III) with surface-supported tau (Tau-410, 2N3R). Changes in current density and impedance changes were used to monitor metal-tau interactions and tau-tau interactions. Our detailed electrochemical studies of surface-supported tau protein are supported by X-ray photoelectron spectroscopy and by measurement of interactions in solution by circular dichroism spectroscopy. Also, we include the effects of tau phosphorylation on the interactions with Fe(II) and Fe(III). Our results demonstrate that a) Fe(II) and Fe(III) bind to the tau protein, b) structural changes occur to tau upon metal binding, c) Fe(II) shows a more pronounced effect, d) phosphorylation affects the metal ion complexation and e) tau-tau interactions are mediated by Fe(II). References: (1) Ahmadi, S.; Zhu, S.; Sharma, R.; Wu, B.; Soong, R.; Majumdar, R. D.; Wilson, D. J.; Simpson, A. J.; Kraatz, H.-B. Aggregation of Microtubule Binding Repeats of Tau Protein Is Promoted by Cu2+. ACS Omega 2019, 4 (3), 5356–5366. https://doi.org/10.1021/acsomega.8b03595. (2) Ahmadi, S.; Wu, B.; Song, R.; Zhu, S.; Simpson, A.; Wilson, D. J.; Kraatz, H. B. Exploring the Interactions of Iron and Zinc with the Microtubule Binding Repeats R1 and R4. J. Inorg. Biochem. 2020, 205, 110987. https://doi.org/10.1016/j.jinorgbio.2019.110987. (3) Ahmadi, S.; Zhu, S.; Sharma, R.; Wilson, D. J.; Kraatz, H.-B. Interaction of Metal Ions with Tau Protein. The Case for a Metal-Mediated Tau Aggregation. J. Inorg. Biochem. 2019, 194, 44–51.
DOI: 10.17632/pvdh4h72fw.2
title: Clinical Evidence for the Efficacy of Acupuncture on Herpes Zoster in China: A Systematic Review and Meta-Analysis

description: Supplementary materials of included studies
DOI: 10.17632/sk9nptb76r.4
title: Efficacy of 755 nm Q-Switched Alexandrite Laser for Hori’s Nevus

description: 755 nm Q-Switched Alexandrite Laser benefits Hori’s Nevus
DOI: 10.17632/z7y3dt35rc.1
title: Analysis of the membrane effects on the energy efficiency of water desalination in a Direct Contact Membrane Distillation (DCMD) system with heat recovery

description: Spreadsheets containing the design matrix for the 2^n factorial and the results of the single factor analysis of the homonymous associated paper.
DOI: 10.25625/3dvvvn/13wddo
title: CH-Lae_SoilModelResults_Opt_Text_FALSE_useDUL_TRUE_saturationLowerLevel_FALSE.RData

description: :unav
DOI: 10.25625/3dvvvn/433rld
title: BE-Vie_SoilModelResults_Opt_Text_FALSE_useDUL_TRUE_saturationLowerLevel_FALSE.RData

description: :unav
DOI: 10.25625/3dvvvn/6fqovv
title: US-Me2_SoilModelResults_Opt_Text_TRUE_useDUL_FALSE_saturationLowerLevel_TRUE.RData

description: :unav
DOI: 10.25625/3dvvvn/8mbk0i
title: US-Me2_SoilModelResults_Opt_Text_FALSE_useDUL_TRUE_saturationLowerLevel_TRUE.RData

description: :unav
DOI: 10.25625/3dvvvn/bkolgj
title: DeHa2017_biljou_met.txt

description: :unav
DOI: 10.25625/3dvvvn/uktq3e
title: SoilMoistureRunComplete.tab

description: :unav
DOI: 10.25625/3dvvvn/xu2jdx
title: DeHa2003_biljou_met.txt

description: :unav
DOI: 10.25625/3dvvvn/z4ik7a
title: IT-Lav_SoilModelResults_Opt_Text_FALSE_useDUL_FALSE_saturationLowerLevel_FALSE.RData

description: :unav
DOI: 10.17632/6ctbs8cyrg.1
title: SAREfit code

description: This research data contains the source code of the work "Ellipse fitting by spatial averaging of random ensembles": The method proposes a new ellipse parametrization based on the coordinates of both foci, and the distance between them and each point of the ellipse where the Euclidean norm is applied. Besides, a certain number of subsets are uniformly drawn without replacement from the overall training set which allows estimating the center of the distribution robustly by employing the L1 median of each estimated focus. An additional postprocessing stage is proposed to filter out the effect of bad fits. Several synthetic and real data tests were developed and confirmed the better outcomes. This folder contains the proposed ellipse fitting method as well as two demo codes for both synthetic and real data applications, created in MATLAB: - Run "DemoSAREfit.m" for fitting artificially generated samples. - Run "DemoSAREfit_RealData.m" for fitting samples extracted from real images. The points obtained from real images were extracted by Canny algorithm as described in the paper. Any other method can be used. Please, cite the paper as well as this research data in your work if you use the code. Thanks.
DOI: 10.17632/b3fkwybd9w.1
title: More Proximal, More Willing to Purchase: The Mechanism for Variability in Consumers' Purchae Intention toward Sincere versus Exciting Brands

description: The dataset underlies a research addressing the mechanism underlying the variability underlying consumers' purchase intention toward sincere and exciting brands.
DOI: 10.21979/n9/brii8z
title: Replication Data for: Cryptography Security

description: Postquantum crypto and cybersecurity
DOI: 10.25625/3dvvvn/df0wp3
title: ModelCalibrationDBF.RData

description: :unav
DOI: 10.25625/3dvvvn/ik58eg
title: CompareETStocker.R

description: :unav
DOI: 10.25625/3dvvvn/kjjojh
title: Hainich2016_journalier.txt

description: :unav
DOI: 10.25625/3dvvvn/lmmi04
title: DeHa2012biljou_soil.txt

description: :unav
DOI: 10.25625/3dvvvn/stq9zi
title: DailySoilWaterModel_final.R

description: :unav
DOI: 10.25625/3dvvvn/z048cy
title: US-Me2SoilModelData.RData

description: :unav
DOI: 10.17632/3kthhpw2pd.1
title: Cluster similarity spectrum integration of single-cell genomics data

description: Technologies to sequence the transcriptome, genome or epigenome from thousands of single cells in an experiment provide extraordinary resolution into the molecular states present within a complex biological system at any given moment. However, it is a major challenge to integrate single-cell sequencing data across experiments, conditions, batches, timepoints and other technical considerations. New computational methods are required that can integrate samples while simultaneously preserving biological information. Here, we propose an unsupervised reference-free data representation, Cluster Similarity Spectrum (CSS), where each cell is represented by its similarities to clusters independently identified across samples. We show that CSS can be used to assess cellular heterogeneity and enable reconstruction of differentiation trajectories from cerebral organoid single-cell transcriptomic data, and to integrate data across experimental conditions and human individuals. We compare CSS to other integration algorithms and show that it can outperform other methods in certain integration scenarios. We also show that CSS allows projection of single-cell genomic data of different modalities to the CSS-represented reference atlas for visualization and cell type identity prediction. In summary, CSS provides a straightforward and powerful approach to understand and integrate challenging single-cell multi-omic data. The presented data set here includes the newly generated single-cell RNA-seq data of cerebral organoids with and without fixation conditions.
DOI: 10.17632/nrj467zmj2.1
title: Influence of bortezomib on cognition in patients and C57Bl/6 mice

description: The 26S proteasome inhibitor bortezomib is currently used to treat multiple myeloma, but also is effective in the treatment of antibody-mediated autoimmune disorders. One clinical concern is bortezomib’s toxicity towards the (central) nervous system. We used standardized neuropsychological testing to assess cognitive function in six patients with myasthenia gravis and systemic lupus erythematodes before and after treatment with a mean cumulative dose of 9.4 mg m-2 bortezomib (TAVAB study, NCT02102594) . Additionally, cognitive performance was measured in adult C57Bl/6 mice after treatment with a human equivalent cumulative dose of 15.6 mg m-2. Bortezomib concentrations were analyzed in the human cerebral spinal fluid (CSF) as well as the brain tissue and serum of adult C57Bl/6 mice at various time points after injection of 1.3 mg m-2 bortezomib with liquid chromatography-tandem mass spectrometry. Neither patients nor mice showed signs of cognitive impairment after bortezomib therapy. Bortezomib concentrations in the human CSF and murine brain tissue reached only 5-7% of serum concentrations with comparable concentrations measured in the hippocampus and the neocortex. Five-fold higher concentrations were needed to damage neuronal cells in vitro. In conclusion, penetration of the intact blood-brain-barrier by bortezomib is low. Overall, our data shows that bortezomib is a safe medication in terms of central nervous system toxicity
DOI: 10.17632/sf7pb6dzx2.1
title: Experimental dataset on the effect of soaking time and coagulant type on the overall quality of cheese extracted from Ethiopian Belessa-95 (Glycine max) soya bean

description: The dataset contained experimental results related to the physical properties of soy cheese extracted from a selected variety of soybean found in Ethiopia. Results indicate how principal process parameters including soaking time and coagulant type (acid and salt-based) can significantly alter the final properties of soy cheese. The data is valuable in terms of providing a preliminary resource to further optimize the process conditions for this particular variety and to draw a comparison with other varieties since different variety will attribute their own properties. So ultimately the data will benefit dietary industries in the process of implementation and tackle protein-energy malnutrition in Ethiopia caused by the elevated cost of animal protein sources. Soybean (Belessa-95) was collected from Pawe agricultural research center, Pawe district, Ethiopia. The extraction process involved a number of steps including pretreatment of soybeans (removal of impurities), soaking, grinding, milk filtration, milk concentration, milk condensation, coagulation, soy cheese filtration. While in the process of extraction different coagulants were used (Lemon, vinegar, and CaSO4.2H2O) at a varied soaking time from 12 to 48 hours. onward all the experimental runs were subjected to different tests including mass yield, protein content (Kjeldahl method), moisture content (AOAC (1990)), ash content(AOAC (1990)), total solid content and pH(AOAC (2000)). Data on sensory evaluation were gathered from five semi-trained panelists using a five-point hedonic scale to record overall acceptability information. Later the data were statistically analyzed using SPSS Statistics version 20 by following analysis of Variance (ANOVA) with a significant level of 5%.
DOI: 10.25625/3dvvvn/3i1pym
title: DE-Hai_SoilModelResults_Opt_Text_TRUE_useDUL_FALSE_saturationLowerLevel_TRUE.RData

description: :unav
DOI: 10.25625/3dvvvn/4lkgwr
title: Hainich2015_journalier.txt

description: :unav
DOI: 10.25625/3dvvvn/cydxw6
title: BE-Vie_SoilModelResults_Opt_Text_FALSE_useDUL_TRUE_saturationLowerLevel_TRUE.RData

description: :unav
DOI: 10.25625/3dvvvn/olpafp
title: RunModelForHainich_v.2.1.R

description: :unav
DOI: 10.25625/3dvvvn/s4o7dy
title: Fig_ETann.jpeg

description: :unav
DOI: 10.5281/zenodo.3786868
title: London Dispersion Governs the Interaction Mechanism of Small Polar and Non-Polar Molecules in Metal-Organic Frameworks

description: Raw data set relating to publication.
DOI: 10.15468/pffrs3
title: Redescription of some species of Bryozoa described by J. Jullien and L. Calvet in the NE Atlantic

description: This dataset contains the digitized treatments in Plazi based on the original journal article Reverter-Gil, Oscar, Souto, Javier (2015): Redescription of some species of Bryozoa described by J. Jullien and L. Calvet in the NE Atlantic. European Journal of Taxonomy 157: 1-17, DOI: http://dx.doi.org/10.5852/ejt.2015.157
DOI: 10.17632/34xy85x8cj.1
title: lean on SMEs

description: Impact of lean technical and social practices on SMEs in automobile industry. Based on request to author, the details will be shared.
DOI: 10.17632/8zv4yw4wc9.1
title: Data: Thermogravimetric and calorimetric dataset for extra heavy crude asphaltenes obtained by electrodeposition in the presence of magnetic field and magnetic nanoparticles

description: The file contains the tables and figures used in the Data In Brief manuscript "Thermogravimetric and calorimetric dataset for extra heavy crude asphaltenes obtained by electrodeposition in the presence of magnetic field and magnetic nanoparticles". Separate tables are given for each experimental scenario. Data was acquired through Thermogravimetry (TGA) and differential scanning calorimetry (DSC), using a Netzsch 449 F1 equipment, and the Proteus software for generating DTGA data.
DOI: 10.17632/gzzrjkjphz.1
title: Combination of Transcranial Direct Current Stimulation (tDCS) and Transcutaneous Electrical Nerve Stimulation (TENS) on Pain, Function and Quality of Life: Single Blind, Placebo Controlled Randomized Trial

description: 72 primary knee OA patients were given either any one of following four groups: combined (active tDCS/active TENS); tDCS alone (active tDCS/sham TENS); TENS alone (sham tDCS/active TENS); (sham tDCS/sham TENS). Outcome variables were pain (visual analog scale); function (6-minute walk test); disability (KOOS_ knee injury osteoarthritis outcome score). Total duration of intervention was 6 weeks (first week 5 sessions, remaining 5 weeks 3 sessions a week).
DOI: 10.21227/tbtt-kg32
title: Intubation Aerosol Containment System Video

description: Objectives: Worldwide efforts to protect front line providers performing endotracheal intubation during the COVID-19 pandemic have led to innovative devices. Authors evaluated the aerosol containment effectiveness of a novel intubation aerosol containment system (IACS) compared with a recently promoted intubation box and no protective barrier. Methods: In a simulation center at the authors’ university, the IACS was compared to no protective barrier and an intubation box. Aerosolization was simulated using a commercial fog machine and leakage of aerosolize mist was visually assessed. Results: The IACS appeared to contain the aerosolized mist, while the intubation box allowed for mist to contact the laryngoscopist and contaminate the clinical space through arm port holes and the open caudal end. Both devices protected the laryngoscopist better than no protective barrier. Discussion: The IACS with integrated sleeves and plastic drape appears to offer superior protection for the laryngoscopist and assistant providers from aerosolized particles.
DOI: 10.21227/xz5n-a569
title: Intubation Aerosol Containment System Video

description: Objectives: Worldwide efforts to protect front line providers performing endotracheal intubation during the COVID-19 pandemic have led to innovative devices. Authors evaluated the aerosol containment effectiveness of a novel intubation aerosol containment system (IACS) compared with a recently promoted intubation box and no protective barrier. Methods: In a simulation center at the authors’ university, the IACS was compared to no protective barrier and an intubation box. Aerosolization was simulated using a commercial fog machine and leakage of aerosolize mist was visually assessed. Results: The IACS appeared to contain the aerosolized mist, while the intubation box allowed for mist to contact the laryngoscopist and contaminate the clinical space through arm port holes and the open caudal end. Both devices protected the laryngoscopist better than no protective barrier. Discussion: The IACS with integrated sleeves and plastic drape appears to offer superior protection for the laryngoscopist and assistant providers from aerosolized particles.
DOI: 10.15468/372huy
title: Synopsis of Bradepyris Kieffer, 1905 (Hymenoptera, Bethylidae, Mesitiinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Barbosa, Diego N., Azevedo, Celso O. (2015): Synopsis of Bradepyris Kieffer, 1905 (Hymenoptera, Bethylidae, Mesitiinae). European Journal of Taxonomy 151: 1-16, DOI: http://dx.doi.org/10.5852/ejt.2015.151
DOI: 10.17632/2bn9g5rfv6.1
title: Development of a Multivariate Prediction Network Model for epidemic progression in order to study the effects of lockdown time and coverage on a closed community of non-immune individuals.(Datasamples and .m code)

description: The aim of this study was to develop a realistic network model to predict qualitatively the relationship between lockdown duration and coverage in controlling the progression of the incidence curve of an epidemic with the characteristics of COVID-19 in a closed and non-immune population. Effects of lockdown time and rate on the progression of an epidemic incidence curve in a virtual closed population of 10 thousand subjects. Predictor variables were R0 values established in the most recent literature (2.7 and 5.7), without lockdown and with coverages of 25%, 50%, and 90% for 21, 35, 70, and 140 days in 13 different scenarios for each R0, where individuals remained infected and transmitters for 14 days. We estimated model validity by applying an exponential model on the incidence curve with no lockdown, with growth rate coefficient observed in realistic scenarios. Pairwise comparisons were performed using Wilcoxon test with Bonferroni correction between peak amplitude, peak latency, and total number of cases for each R0 used. For R0=5.7, the flattening of the curve occurs only with long lockdown periods (70 and 140 days) with a 90% coverage. For R0=2.7, coverages of 25 and 50% also result in curve flattening and reduction of total cases, provided they occur for a long period (70 days or more). Short and soft lockdowns had no relevant effect on incidence or casuistry. These data corroborate the importance of lockdown duration regardless of virus transmission.
DOI: 10.17632/gmnb22m5kw.1
title: Future Avoided Cost Explorer: Colorado Hazards datasets

description: This State of Colorado project was led by the Colorado Division of Homeland Security and Emergency Management and the Colorado Water Conservation Board and supported by Lynker Technologies. Suggested citation: State of Colorado and Lynker (2020). Datasets. Future Avoided Cost Explorer: Colorado Hazards. http://dx.doi.org/10.17632/gmnb22m5kw.1 The following datasets are the product of the Colorado Future Avoided Cost Explorer (FACE:Hazards) project. FACE:Hazards is a suite of resources for local decision-makers to explore how resilience actions today, can save Colorado money in the long run. This study and web-based visualization helps communities peer into the economic risks of climate change. FACE:Hazards empowers communities to develop neighborhoods, invest resources, and recover from disasters with data- and climate-informed decisions that reduce our risks to natural hazard impacts. The project team developed statistical models to quantify the physical relationships between climate variables and hazard severity under historical conditions, as well as the relationship between hazard severity and economic damages. Those interactions were re-calculated using future climate and population conditions to assess how those damages might change in the future. In each case, we calculated expected annual damages over a window of time (e.g., 20-30 years) representative of baseline or future conditions, and expressed damages as "expected annual damage" over that window.
DOI: 10.15468/9r9e29
title: A new genus for the Lesser Moorhen Gallinula angulata Sundevall, 1850 (Aves, Rallidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Sangster, George, García-R, Juan Carlos, Trewick, Steve A. (2015): A new genus for the Lesser Moorhen Gallinula angulata Sundevall, 1850 (Aves, Rallidae). European Journal of Taxonomy 153: 1-8, DOI: http://dx.doi.org/10.5852/ejt.2015.153
DOI: 10.15468/d2x92k
title: Amage imajimai sp. nov., a new species of Ampharetidae (Annelida: Polychaeta) from Japanese waters

description: This dataset contains the digitized treatments in Plazi based on the original journal article Reuscher, Michael G. (2015): Amage imajimai sp. nov., a new species of Ampharetidae (Annelida: Polychaeta) from Japanese waters. European Journal of Taxonomy 154: 1-7, DOI: http://dx.doi.org/10.5852/ejt.2015.154
DOI: 10.15468/kt5v5c
title: Description of a new monospecific genus of South African Trichiina, with a key to the related genera (Coleoptera: Scarabaeidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ricchiardi, Enrico (2015): Description of a new monospecific genus of South African Trichiina, with a key to the related genera (Coleoptera: Scarabaeidae). European Journal of Taxonomy 159: 1-6, DOI: http://dx.doi.org/10.5852/ejt.2015.159
DOI: 10.15468/vv25au
title: New species of Thelonema, Metasphaerolaimus, and Monhystrella (Nematoda, Monhysterida) from Kermadec Trench, Southwest Pacific

description: This dataset contains the digitized treatments in Plazi based on the original journal article Leduc, Daniel (2015): New species of Thelonema, Metasphaerolaimus, and Monhystrella (Nematoda, Monhysterida) from Kermadec Trench, Southwest Pacific. European Journal of Taxonomy 158: 1-19, DOI: http://dx.doi.org/10.5852/ejt.2015.158
DOI: 10.17632/4yhc64z9n2.1
title: Effect of human attachment style on horse behaviour and physiology during equine-assisted activities

description: H0: human attachment style (AS) will affect horse behaviour and heart rate during a 10-week equine-facilitated learning program. AS of at-risk youth was scored on anxiety and avoidance to determine category (low anxiety and avoidance = secure; low anxiety high avoidance = dismissing; high anxiety low avoidance = preoccupied; high anxiety and avoidance = fearful). Youth were paired for grooming sessions (G) and rode individually during arena sessions (A). Horse behaviours (oral, avoidance, affiliative) were captured by 0/1 interval sampling every 5sec for 2min windows during G and A. Horse heart rate (HR) was averaged in 5sec intervals. horse gait (halt (H), walk (W), back up (B)) was noted every 5sec during arena sessions. Adolescents’ AS affected horse affiliative behaviour during grooming, and horse heart rate and avoidance behaviour during riding. Over the 10-week program, therapy horses showed overall more affiliative behaviour and less variability in their stress response (heart rate and avoidance behaviours) toward fearful and preoccupied AS adolescents during grooming and riding.
DOI: 10.17632/ynhsz6v6f3.1
title: Impact of Shoaling Ocean Surface Waves on Wind Stress and Drag Coefficient in Coastal Waters: Part II Idealized Tropical Cyclones
DOI: 10.5281/zenodo.3787365
title: GRAY

description: GRAY PharmacoSet (PSet) generated by ORCESTRA. Metadata can be found on ORCESTRA at: http://orcestra.ca/10.5281/zenodo.3787366
DOI: 10.5281/zenodo.3787366
title: GRAY

description: GRAY PharmacoSet (PSet) generated by ORCESTRA. Metadata can be found on ORCESTRA at: http://orcestra.ca/10.5281/zenodo.3787366