cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.4016490.v1
title: Supplementary Material for: Dissecting Aortic Aneurysm 55 Years after Diagnosis of Iris Flocculi

description: <b><i>Purpose:</i></b> The aim of this study is to report the clinical features, imaging studies, surgical removal, and pathology of congenital iris flocculi in a patient who developed a life-threatening dissecting aortic aneurysm after 55 years of follow-up. <b><i>Methods:</i></b> Documentation with iris photography was performed from age 18 to 55 years, at which time anterior segment optical coherence tomography (OCT) was performed. At the time of subsequent cataract surgery, the iris flocculi were removed in each eye and submitted for light and electron microscopy. <b><i>Results:</i></b> The size and shape of the iris flocculi waxed and waned over the years but caused no visual disturbance. Anterior segment OCT demonstrated clear, round cysts with thin lining and no solid component. At the age of 55, congestive heart failure from a dissecting aortic aneurysm was discovered and surgically repaired. Subsequent bilateral cataract surgery and cyst removal were performed, and the iris flocculi were studied with light and electron microscopy. <b><i>Conclusions:</i></b> Congenital iris flocculi cause little, if any, visual impairment in most cases. However, they are occasionally associated with dissecting aortic aneurysm due to a shared mutation in smooth muscle that affects both the iris and the aorta. Patients with iris flocculi should be monitored periodically for aortic abnormalities.
DOI: 10.6084/m9.figshare.5123488.v1
title: Supplementary Material for: Chronic Kidney Disease and Cognitive Impairment: A Systematic Review and Meta-Analysis

description: <b><i>Background:</i></b> Chronic kidney disease (CKD) has emerged as a possible new risk factor of cognitive impairment and dementia, but results of studies remain conflicting. <b><i>Methods:</i></b> A systematic literature research of electronic databases (MEDLINE, Cochrane Library and Goggle Scholar covering the period from 1980 to January 2012) and meta-analysis of relevant cross-sectional and longitudinal studies were conducted to assess the association of CKD and cognitive decline. <b><i>Results:</i></b> Most cross-sectional and longitudinal studies suggest an association between cognitive impairment and CKD. Meta-analysis of cross-sectional and longitudinal studies comprising 54,779 participants yielded an association of cognitive decline in patients with CKD compared with patients without CKD (OR 1.65, 95% CI 1.32–2.05; p &lt; 0.001, and OR 1.39, 95% CI 1.15–1.68; p &lt; 0.001, respectively). <b><i>Conclusion:</i></b> This is the first meta-analysis assessing the impact of CKD on cognitive decline. Our results suggest CKD being a significant and independent somatic risk factor in the development of cognitive decline.
DOI: 10.6084/m9.figshare.5125678.v1
title: Supplementary Material for: Clinical and Echocardiographic Predictors of Cardiorenal Syndrome Type I in Patients with Acute Ischemic Right Ventricular Dysfunction

description: <b><i>Background:</i></b> In current cardiology practice, the importance of acute cardiorenal syndrome (CRS) in determining the outcome of patients with acute coronary syndrome (ACS) is well recognized. Certain groups of ACS patients are at higher risk of developing CRS. Data on the association between right ventricular (RV) functions and CRS after acute myocardial infarction (AMI) are scarce. The purpose of the current study was to evaluate the relation between RV function and the development of CRS in patients presenting with inferior wall AMI and RV involvement. <b><i>Patients and Methods:</i></b> Patients with inferior wall AMI with RV involvement underwent echocardiography at admission to assess RV function. RV functions were quantified according to RV fractional area change (RVFAC), tricuspid annular plane systolic excursion (TAPSE), and RV outflow tract fractional shortening (RVOTFS). The patients were followed up until discharge from hospital. All patients who developed CRS were included in group I, all patients who did not develop CRS were included in group II (controls). Multivariate analysis was carried out to determine the significance of the echocardiographic and clinical parameters in predicting the development of CRS in these patients. <b><i>Results:</i></b> In our study, a history of diabetes mellitus, cardiogenic shock at admission, and RVFAC and TAPSE could significantly predict the development of CRS in patients presenting with inferior wall AMI and RV involvement. <b><i>Conclusions:</i></b> RV functions provide strong prognostic information regarding the development of CRS in patients of inferior wall AMI with RV involvement.
DOI: 10.6084/m9.figshare.6508796.v1
title: Supplementary Material for: Comparison of Verapamil versus Heparin as Adjunctive Treatment for Transradial Coronary Procedures: The VERMUT Study

description: <b><i>Objective:</i></b> We sought to demonstrate that the combination of a local vasodilator (verapamil), modern materials, patent hemostasis, and intravenous anticoagulant only in the case of percutaneous coronary intervention, as compared to default heparin administration after sheath insertion, may optimize a combined endpoint, including radial artery oc­clusion (RAO), radial artery spasm (RAS), and access site complication. <b><i>Methods:</i></b> This is a prospective, single-center, double-blind randomized trial. Overall, 418 patients undergoing a transradial approach (TRA) for coronary procedures were randomized 1: 1 to receive intraradial verapamil (5 mg) or heparin (5,000 IU) after a 6-Fr sheath insertion. The primary outcome was the 24-h occurrence of RAO (ultrasound confirmation), access site complication, and RAS requiring the bailout administration of vasodilators. <b><i>Results:</i></b> The combined primary outcome occurred in 127 (30%) patients. It was significantly lower in patients randomized to verapamil as compared to others (26 vs. 35%, <i>p</i> = 0.03). This was mainly due to a significant reduction in RAS (3 vs. 10%, <i>p</i> = 0.006). The 24-h and 30-day occurrence of RAO did not differ between the study groups. <b><i>Conclusion:</i></b> Local administration of verapamil versus heparin reduces RAS, without increasing RAO, which appears to be strictly related to radial artery diameter and hemostasis time.
DOI: 10.6084/m9.figshare.6870146.v1
title: Supporting Information: Graph Theory Approach to High-Throughput Surface Adsorption Structure Generation

description: Supporting information for the Graph Theory Approach to High-Throughput Surface Adsorption Structure Generation manuscript.
DOI: 10.17632/cd6fkdfyf5
title: Data for: Optimization of Models for a Rapid Identification of Lithology While Drilling - A Win-Win Strategy Based on Machine Learning
DOI: 10.6084/m9.figshare.21372000.v1
title: best model pth files

description: Body condition scoring is a simple method to estimate the energy supply of dairy cattle. We investigated how computer vision-based supervised deep learning, specifically neural networks, can automate body condition scoring. To execute this, we have used video recordings of the rumps of a large number of animals. We have trained and tested various convolutional neural networks with this collected data. The weights of our trained CNNs are freely available, supporting similar works.
DOI: 10.6084/m9.figshare.21640394.v1
title: Pcc1 and Pcc2 sequences

description: Pcc1 and Pcc2 sequences used for sequence conservation analysis and phylogenetic analysis
DOI: 10.6084/m9.figshare.28646069.v1
title: <b>Supporting Dataset S24</b>

description: <b>Supporting Dataset S24</b>. Compressed folder containing the 87 contigs of the <i>sFus</i> (<i>Spiroplasma</i> from <i>Glossina</i> <i>fuscipes</i> <i>fuscipes</i>) assembly along with the annotations inferred with Prokka.
DOI: 10.6084/m9.figshare.3472703.v1
title: The simulated sEMG signals

description: The guideline to use the dataset.
DOI: 10.6084/m9.figshare.8632370.v1
title: Yes-associated protein 1 regulates proliferation of mesenchymal stem cells by regulating the β-catenin signaling pathway

description: <b>Abstract</b> <b>Objectives:</b> The placenta and umbilical cord are preeminent candidate sources of mesenchymal stem cells (MSCs). However, placenta-derived MSCs (P-MSCs) showed greater proliferation capacity than umbilical cord-derived MSCs (UC-MSCs) in our study. We investigated the drivers of this proliferation difference and elucidated the mechanisms of proliferation regulation.<b></b> <b>Materials and Methods:</b> Proteomic profiling and Gene Ontology (GO) functional enrichment were conducted to identify candidate proteins that may influence proliferation. Using lentiviral or small interfering RNA infection, we established overexpression and knockdown models and observed changes in cell proliferation to examine whether a relationship exists between the candidate proteins and proliferation capacity. Real-time quantitative polymerase chain reaction, western blotting, and immunofluorescence assays were conducted to elucidate the mechanisms underlying proliferation. <b>Results: </b>Six candidate proteins were selected based on the results of proteomic profiling and GO functional enrichment. Through further validation, Yes-associated protein 1 (YAP1) and β-catenin were confirmed to affect MSC proliferation rates. YAP1 and β-catenin showed increased nuclear co-localization during cell expansion. YAP1 overexpression significantly enhanced proliferation capacity and upregulated the expression of both β-catenin and the transcriptional targets of Wnt signaling, CCND1 and c-MYC, whereas silencing β-catenin attenuated this effect. We found that YAP1 directly interacts with β-catenin in the nucleus to form a transcriptional YAP/β-catenin/TCF4 complex. <b>Conclusions: </b>Our study revealed that YAP1 and β-catenin cause the different proliferation capacities of P-MSCs and UC-MSCs. Mechanism analysis showed that YAP1 stabilized the nuclear β-catenin protein, and also triggered the Wnt/β-catenin pathway, promoting proliferation.<b></b>
DOI: 10.17632/4hgdz8685w
title: Daily and monthly atmospheric variables and water salinity measurements at the Pichavaram mangrove and Kaziranga National Park in India

description: This dataset contains the daily averaged values of air temperature (Tair in deg C), air pressure (Pair in hPa), net radiation (Rn in W m-2), wind speed (WS in m s-1), vapour pressure deficit (VPD in hPa), transpiration (T in W m-2) and evaporation (E in W m-2), daily total rainfall (Pn in mm) at these two sites measured using micrometeorological tower-based sensors. It also contains the monthly averaged soil salinity (ST in ppt) measurement at the Pichavaram mangrove..
DOI: 10.17632/v2rdbwpx7k
title: Fully replicable and automated retention measurement setup for characterization of bio-adhesion

description: This dataset contains all relevant data files to fully reproduce an open-source retention measurement system for the evaluation of bioadhesion/mucoadhesion of e.g. drug delivery devices/formulations.
DOI: 10.6084/m9.figshare.7067402.v1
title: Supplementary Material for: Panax Quinquefolium Saponins Attenuate Myocardial Dysfunction Induced by Chronic Ischemia

description: <b><i>Background/Aims:</i></b> Previous studies in rat models of myocardial ischemia showed that Panax quinquefolium saponins (PQS) could attenuate ischemic/reperfusion injury, increase vessel density and improve cardiac function. In the current study, we examined whether PQS could attenuate myocardial dysfunction in a swine model of chronic myocardial ischemia (CMI). <b><i>Methods:</i></b> CMI was established in Bama mini-pigs by placing amroid constrictor on the left anterior descending artery (LAD). Starting from 2 months after the surgery, pigs randomly received PQS (30 mg/kg/day), atorvastatin (1.5 mg/kg/day), or no drug for one month (n=6). A group of pigs receiving sham surgery was included as an additional control. Glucose utilization was assessed with positron emission tomography-computer tomography (PET-CT). Cardiac function was assessed with echocardiography. Myocyte size, nuclear density, and arteriolar density were examined in tissue section obtained from the ischemia area. Potential molecular targets of PQS were identified using proteomic analysis with isobaric tags for relative and absolute quantitation (iTARQ) and network pharmacology. <b><i>Results:</i></b> In comparison to the sham controls, pigs implanted with ameroid constrictor had decreased ventricular wall motion, left ventricular ejection fraction (LVEF), and glucose utilization. PQS significantly increased cardiac function and glucose utilization. Arteriole density and myocyte nuclear density were increased. Myocyte diameter was decreased. PQS also attenuated the CMI-induced change of protein expression profile. The effects of atorvastatin were generally similar to that of PQS. However, PQS attenuated the reduction of left ventricular systolic WT induced by CMI more robustly than atorvastatin. <b><i>Conclusion:</i></b> The results from the current study supports the use of PQS in patients with coronary artery disease.
DOI: 10.6084/m9.figshare.7849160.v6
title: Open Access Outreach Materials: Slides & Handout

description: A set of resources for open access outreach. Includes 4 slideshows and a handout:<br>- Copyright in Higher Education: Presentation on copyright in higher education. Topics include what copyright is, the purpose of copyright, using copyrighted works (permissions, exemptions, fair use), author rights, and open access.<br>- Open Access: Increase the Visibility of your Scholarship: Presentation on the fundamentals of open access. Topics include the social, political and especially economic context, defining open access, green OA, rights retention, sci-hub, and the beneficiaries of open access.<br>- Open Access: Identifying Quality Journals & Avoiding Predatory Publishers: Slideshow for presentation on open access. Topics include defining Gold OA (APCs, business models, subsidies), OA citation advantage, predatory publishers, whitelists/blacklists.<br>- Open Educational Resources: An Introduction: Slideshow for presentation on OER. Topics include textbook market, student costs, defining OER, access options, student and faculty satisfaction, student success measurements, 5 Rs.<br>- Strategies for Accessing Research After Graduation: 2 page handout with tips for how to access research post-graduation. Includes PubMed, DOAJ, Google Scholar, Unpaywall, public and academic libraries
DOI: 10.17632/y9svrbh27n
title: dataset

description: Data set about hand configuration of Pakistan Sign Language
DOI: 10.25946/28537391.v1
title: Cognitive Performance, Circadian Rhythms and Circadian Type

description: The body's 24-hour clocks regulate when we feel sleepy or alert. In shift workers, these biological clocks become misaligned due to sleep and wake which occurs in opposition to the light-dark cycle. Misaligned rhythms lead to reduced cognitive performance and increased fatigue, which can result in significant workplace accidents. Some individuals adapt to shift work better than others, though the mechanisms driving this individual difference are not well known. Subjective assessments of Circadian Type may be one way of identifying an individual's propensity to adapt to shift work, and may me a cost-effective way to assess the biological rhythms that regulate the circadian system.
DOI: 10.6084/m9.figshare.14564550.v1
title: Parylene C absorption coefficient spectrum

description: Optical absorption coefficient spectrum of Parylene C thin films obtained by measuring the transmittance of multiple films in liquid filled cuvettes as described in the paper.
DOI: 10.6084/m9.figshare.17091116.v1
title: Element content data of winter wheat root under drought stress by two phosphorus treatments

description: Phosphorus-stress and drought-stress are common abiotic stresses for wheat. This study constructed element content of wheat seedling roots using two winter wheat with contrasting drought tolerance and phosphorus utilization efficiency. They were treated with drought stress under conventional–phosphorus level (CP: 1.0 mmol/L) and low-phosphorus levels (LP: 0.05 mmol /L), respectively. Then they were used for element content detection after 7 days of drought and after-rewatering-3day. The objective of the present study was to increase the information about the effect of drought on the element content characteristics of wheat root cultured by two phosphorus levels.
DOI: 10.6084/m9.figshare.21385260.v1
title: company_names_data

description: The data contain a sample of 1,597,336 pairs of firms matched from two data sources: HeadHunter job board platform and Ruslana firm-level data aggregator. Columns represent the following issues: <em>hh_name</em> - the set of lowercased names (initial and transliterated) of a firm from HeadHunter platform; <em>rus_name</em> - the set of lowercased names (initial and transliterated) of a firm from Ruslana platform; <em>J_M</em> - the Jaccard similarity between two previous sets obtained with MinHash approximation (100 hash-functions) and converted into integer scale {0, 1, ..., 100}; <em>d_H</em> - the geographic distance between two firms in km; <em>match</em> - the Boolean indication of the pair match (marked-up and manually validated); <em>ind</em> - the Boolean indication of the same company industry based on the company and industry description similarity; <em>entity</em> - the Boolean indication of the same company legal form based on the company keywords; <em>subs</em> - the Boolean indication that at least one of company name formulation from one data source is a substring of another company name from another database; <em>sample</em> - values of "train" or "test" indication training and test samples.
DOI: 10.6084/m9.figshare.21664172.v1
title: BD Covid19Hospi.dta

description: Dataset of covid-19 patient in hospital
DOI: 10.6084/m9.figshare.28280297.v1
title: data.xlsx

description: 本研究主要集中在东洞庭湖湿地自然保护区的小溪湖。 该实验在中国科学院洞庭湖湿地生态系统研究站野外综合观测点（29°30′ N，112°48′ E，图 1）进行。 2023 年 10 月，当东洞庭湖自然保护区小溪湖莎草甸完全裸露时， <i>C. brevicuspis</i> 在无人为干扰、分布均匀、海拔一致的区域选择<i>C. brevicuspis</i>，靠近并平行于水边。每个样带包括不同的割草处理，即完全割草处理 （FM）、 为 15 cm 的残茬修剪处理 （SM） 和不割草处理 （CK）（图 1）。每个样带由三个面积相等的样方组成（每个样方 20 m × 20 m）。 样本采集于 2023 年 10 月下旬至 2024 年 3 月进行，每月采样两次（每月 8 日和 23 日）。 10 月 23 日的第一次采样被指定为 T0，随后在 11 月 8 日、12 月 23 日等进行的采样依次记录，直到 3 月 23 日的 T10。T0 表示割草前采样日期<i>短蝇</i>，第一个生长周期结束于 T6，第二个生长周期从 T7 开始。在每次采样事件中，为每个处理随机建立两个 1 m × 1 m 样方， 每次采样总共 15 个样方。在样方中，密度和高度<i>短蝇</i>被记录下来。 收获植物的所有活体地上部分（&gt;50% 绿色，可能具有光合作用活性），带回实验室，干燥和称重以确定生物量和营养成分（氮和纤维素浓度）。同时，挖掘植物的地下部分（确保保留地下结构之间的连接），带回实验室，仔细清洁，并分类为芽类型（LRB 和 SRB）。总根茎芽 （TRB） 密度计算为每平方米 LRB 和 SRB 之和。 然后将地下部分干燥，并记录它们的生物量。 草食性鹅是目标动物，经常在它们的觅食地附近休息和排便，粪便的数量可以在一定程度上反映样方中鹅的摄食数量和它们的食物偏好。 为确保数据准确性，每次计数后去除样方内的所有粪便。
DOI: 10.6084/m9.figshare.29092304.v1
title: Supplementary Material Appendix A.docx

description: Supplementary Material Appendix A
DOI: 10.6084/m9.figshare.12782075.v1
title: GPS satellites orbit and clock

description: The precise orbit and clock for GPS satellites
DOI: 10.6084/m9.figshare.23615433.v1
title: Menlascan

description: The Menlascan results provided measurements on the cardiovascular system and microcirculation. The most important results were the improvement of cardiovascular and microcirculation scores as the ANS is prone to rapid changes with emotions.
DOI: 10.6084/m9.figshare.4758004.v1
title: UKCP-100-extension.xml

description: Dataset that includes 100 terms from the UKCP lexicon. This is written in LMF format in order to be compatible with WordNet.<br>This resource has been developed to extend WordNet with Emergency Response (ER) terminologies and so to improve semantic matching between organisations in ER scenarios<br><br>
DOI: 10.6084/m9.figshare.5143915.v1
title: Measuring and explaining the marriage boom in the developed world

description: Using aggregated data from 25 developed countries over a lengthy period of time, this article presents a measure of the marriage boom observed in the twentieth century and an explanation for its causes. One of my main conclusions is that even though it basically developed after the Second World War, its origins are to be found before it. I found that, contrary to the views of some scholars, this boom was not a short-lived phenomenon, but actually lasted for 90 years on average. Using panel data analysis techniques, I am able to show that the rise in women’s education, state spending on social benefits, and larger percentages of people employed in the primary sector tended to discourage marriage. I also found a quadratic relationship between the nuptiality index and the per capita income and mortality rates.
DOI: 10.6084/m9.figshare.7808036.v1
title: Supplementary Material for: Body Composition and Circulating Polyunsaturated Fatty Acids at Age 6 Years: A Longitudinal Pilot Study

description: Maternal polyunsaturated fatty acid (PUFA) status during pregnancy may influence birth outcomes and offspring adiposity during childhood. Cord blood PUFA levels associate positively with maternal PUFA and negatively with the newborn’s abdominal adiposity. However, longitudinal, prospective studies consistently evaluating maternal and cord blood and PUFA levels in childhood and their association with the child’s body composition are so far lacking. In a population of 16 apparently healthy children born appropriate for gestational age and followed longitudinally since birth, we assessed circulating PUFA (by gas chromatography) in maternal, cord, and peripheral blood at age 6 years and studied their correlation with body composition (by absorptiometry) and endocrine-metabolic variables at age 6 years. No associations were found among parameters of body composition and endocrine-metabolic variables at age 6 years and maternal, cord blood or circulating PUFA in peripheral blood. Maternal levels of <i>n</i>-6 linoleic acid, total <i>n</i>-6, and the ratio of <i>n</i>-6:<i>n</i>-3 correlated with their corresponding PUFA levels at age 6 years. In conclusion, in this pilot study, maternal, cord blood, and children’s circulating PUFA do not appear to have an impact on body composition and endocrine-metabolic status at the age of 6 years. The close association between maternal PUFA and offspring PUFA at that age may reflect a similarity in nutritional habits in the mother and child.
DOI: 10.6084/m9.figshare.7976156.v1
title: Supplementary Data 2 - GPX4diffExp.xlsxUntitled Item

description: Differential expression and single-sample Gene-Set Enrichment Analysis results comparing gene-expression profiles of cell lines sensitive to GPX4 KO (n=113) versus others (n=161). Enrichment p-values were obtained by randomly permuting the gene signature 10,000 times and adjusting for multiple testing using the Benjamini-Hochberg method.