cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27693735.v1
title: A sample of multimodal neuroimaging dataset from a single participant from probing acute aerobic exercise

description: A sample of multimodal neuroimaging dataset from a single participant from probing acute aerobic exercise
DOI: 10.15468/dl.tk4n6v
title: Occurrence Download

description: A dataset listing the 133 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Inventaire des lichens de France métropolitaine"
 ]
}

 The dataset's 133 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012441-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jtye94
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Locality is La Bruffière",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 103 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012469-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kyhcsa
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Colletotrichum orchidearum)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012472-241107131044228/datasets/export for details.
DOI: 10.15468/dl.f32dq6
title: Occurrence Download

description: A dataset containing 21808 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Banksia Atlas"
 ]
}

 The dataset includes 21808 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012471-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hetvq4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Colletotrichum orchidearum)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012474-241107131044228/datasets/export for details.
DOI: 10.21223/3ut8hi
title: Dataset for: Micronutrient Concentration in Bitter Potatoes from Puno - 2007

description: Four native varieties of bitter potatoes were used to analyze mineral concentration in fresh and cooked tubers. Mineral concentrations in these tubers were determined using the spectrophotometry method. Treatments included white and black chuño from Huancavelica, as well as tubers from Puno. The experiment was conducted under a completely randomized design.
DOI: 10.21223/3ut8hi/e3gii3
title: 03_Data_dictionary.tab

description: :unav
DOI: 10.21223/3ut8hi/fdaluz
title: TMIN200712_PUNO_Fresh_Bitter_Potatoes.xls

description: :unav
DOI: 10.21223/3ut8hi/lzttf8
title: 02_Material_list_Puno_Fresh_Bitter_2007.tab

description: :unav
DOI: 10.21223/3ut8hi/rv4sgm
title: 01_Data_minerals_Puno_Fresh_Bitter_2007.tab

description: :unav
DOI: 10.15468/dl.2vurs5
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((91.79800261353421 44.49265206975045,95.79800261353421 44.49265206975045,95.79800261353421 48.49265206975045,91.79800261353421 48.49265206975045,91.79800261353421 44.49265206975045))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Panthera uncia (Schreber, 1775)",
 "Year 1979-2024"
 ]
}

 The dataset includes 14 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012475-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5zppts
title: Occurrence Download

description: A dataset containing 8856 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera onca (Linnaeus, 1758)"
 ]
}

 The dataset includes 8856 records from 271 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012473-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21223/0xgn5q
title: Dataset for: Vitamin C Analysis in Promising Potato Clones from Junin, Peru (2007)

description: An analysis of vitamin C concentration was performed on 29 promising potato clones in the Victoria region of Junin in 2007. The study employed a completely randomized design (CRD) with two replications. These clones were part of Set 5, identified as promising clones for further agricultural development.
DOI: 10.21223/0xgn5q/5nikio
title: 02_Material_list_VitaminC_Huancayo_Set5_2007.tab

description: :unav
DOI: 10.21223/0xgn5q/md8stw
title: TVIT200712_LAVICT_Set_5.xls

description: :unav
DOI: 10.21223/0xgn5q/nos2le
title: 01_Data_VitaminC_Huancayo_Set5_2007.tab

description: :unav
DOI: 10.21223/0xgn5q/pjzgbp
title: 03_Data_dictionary.tab

description: :unav
DOI: 10.6084/m9.figshare.27686070
title: Raw data for transcriptome analysis and molecular docking.

description: To assess the binding affinity of kaempferol with LuxS protein and blaCTX-M-27 protein, we conducted a molecular docking assay using Autodock4 software. The chemical structure of kaempferol was retrieved from the PubChem database, while the structures of<i> </i><i>E. coli</i> LuxS protein and blaCTX-M-27 protein were obtained from UniProtKB. We assessed the binding capability between kaempferol and LuxS protein using Autodock Vina, Pymol was used to visualize the results.Transcriptome sequencing services were conducted by Novogene-Beijing platform. SY20 of ESBLs <i>E.coli </i>were treated 0.25MIC kaempferol and 0.25MIC kaempferol + 0.25MIC ceftiofur) procedure involved reactivating the test bacteria in 400mL of MH broth and incubating them at 37°C for 4 hours until reaching the early log phase. Subsequently, drug solutions were added to achieve the desired final concentration and then incubated at 37°C for an additional 4 hours. The cultures were then centrifuged at 4°C, the supernatant was discarded, and the samples were flash-frozen in liquid nitrogen. Utilizing established RNA extraction protocols. RNA integrity and total quantity were evaluated using an Agilent 2100 bioanalyzer. Ribosomal RNA (rRNA) was depleted from the total RNA to enrich for mRNA using probes, and libraries were constructed in a strand-specific manner. Subsequently, different libraries were pooled based on effective concentration and desired sequencing output for Illumina sequencing, which involved quality analysis of the sequencing, quantitative gene expression analysis, GO enrichment analysis, KEGG enrichment analysis, etc.
DOI: 10.6084/m9.figshare.27686070.v1
title: Raw data for transcriptome analysis and molecular docking.

description: To assess the binding affinity of kaempferol with LuxS protein and blaCTX-M-27 protein, we conducted a molecular docking assay using Autodock4 software. The chemical structure of kaempferol was retrieved from the PubChem database, while the structures of<i> </i><i>E. coli</i> LuxS protein and blaCTX-M-27 protein were obtained from UniProtKB. We assessed the binding capability between kaempferol and LuxS protein using Autodock Vina, Pymol was used to visualize the results.Transcriptome sequencing services were conducted by Novogene-Beijing platform. SY20 of ESBLs <i>E.coli </i>were treated 0.25MIC kaempferol and 0.25MIC kaempferol + 0.25MIC ceftiofur) procedure involved reactivating the test bacteria in 400mL of MH broth and incubating them at 37°C for 4 hours until reaching the early log phase. Subsequently, drug solutions were added to achieve the desired final concentration and then incubated at 37°C for an additional 4 hours. The cultures were then centrifuged at 4°C, the supernatant was discarded, and the samples were flash-frozen in liquid nitrogen. Utilizing established RNA extraction protocols. RNA integrity and total quantity were evaluated using an Agilent 2100 bioanalyzer. Ribosomal RNA (rRNA) was depleted from the total RNA to enrich for mRNA using probes, and libraries were constructed in a strand-specific manner. Subsequently, different libraries were pooled based on effective concentration and desired sequencing output for Illumina sequencing, which involved quality analysis of the sequencing, quantitative gene expression analysis, GO enrichment analysis, KEGG enrichment analysis, etc.
DOI: 10.5281/zenodo.14141394
title: 3x2 datavectors DR1 NLflags

description: Only Shear has been tested. Use at your own risk.
DOI: 10.5281/zenodo.14141395
title: 3x2 datavectors DR1 NLflags

description: Only Shear has been tested. Use at your own risk.
DOI: 10.5281/zenodo.13828060
title: Hearing Aid Noisy Speech Dataset

description: Speech dataset, based on the Google Speech Commands Dataset, containing (simulated) noisy own voice as if it were captured by a hearing aid with 2 (front and rear) behind-the-ear microphones and 1 in-ear-canal microphone.
DOI: 10.5281/zenodo.14140845
title: Experimental data for "Measurement Report: Influence of particle density on secondary ice production by graupel and ice pellet collisions"

description: This dataset includes measurement data on secondary ice production due to bare graupel - bare graupel, and ice pellet - ice pellet collisions carried out in the Mainz Cold Room (M-CR) of the Johannes Gutenberg University of Mainz.
DOI: 10.5281/zenodo.13828059
title: Hearing Aid Noisy Speech Dataset

description: Speech dataset, based on the Google Speech Commands Dataset, containing (simulated) noisy own voice as if it were captured by a hearing aid with 2 (front and rear) behind-the-ear microphones and 1 in-ear-canal microphone.
DOI: 10.5281/zenodo.14140800
title: Hearing Aid Noisy Speech Dataset

description: Speech dataset, based on the Google Speech Commands Dataset, containing (simulated) noisy own voice as if it were captured by a hearing aid with 2 (front and rear) behind-the-ear microphones and 1 in-ear-canal microphone.
DOI: 10.15468/dl.6fbutd
title: Occurrence Download

description: A dataset containing 32534 records in GBIF matching the query:
SELECT "year", GBIF_EEARGCode( 1000, decimalLatitude, decimalLongitude, COALESCE(coordinateUncertaintyInMeters, 1000) ) AS eeaCellCode, classKey, class, genusKey, genus, COUNT(*) AS occurrences, MIN(COALESCE(coordinateUncertaintyInMeters, 1000)) AS minCoordinateUncertaintyInMeters, MIN(GBIF_TemporalUncertainty(eventDate)) AS minTemporalUncertainty, IF(ISNULL(classKey), NULL, SUM(COUNT(*)) OVER (PARTITION BY classKey)) AS classCount FROM occurrence WHERE occurrenceStatus = 'PRESENT' AND genusKey IN (2284443, 2202786, 2162003, 2161911, 2161467, 7652364, 2176168, 2149911, 3092125, 2771094, 8782549, 2457378, 2453882, 2457825, 2454645, 2465626, 2466496, 2459675, 2444141, 2444221, 2447418, 2441658, 2442664, 3266899, 2473221, 2445496, 5221394, 2443339, 4553469) AND continent = 'EUROPE' AND "year" &gt;= 1900 AND hasCoordinate = TRUE AND genusKey IS NOT NULL AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE') AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE') AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID') AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH') AND LOWER(identificationVerificationStatus) NOT IN ( 'unverified', 'unvalidated', 'not validated', 'under validation', 'not able to validate', 'control could not be conclusive due to insufficient knowledge', 'uncertain', 'unconfirmed', 'unconfirmed - not reviewed', 'validation requested' ) GROUP BY "year", eeaCellCode, classKey, class, genusKey, genus ORDER BY "year" DESC, eeaCellCode ASC, genusKey ASC;

 The dataset's 32534 records were derived from 649 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012425-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bheafr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Colletotrichum orchidearum)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012478-241107131044228/datasets/export for details.
DOI: 10.5281/zenodo.13821308
title: Sainsc: supporting data

description: AnnData file with annotated segmentation-based cells from Xenium Brain slices.

The cell annotation is used to generate the cell-type signatures and compare the cell-type assignment of Sainsc on the Xenium brain dataset (see Müller-Bötticher et al. 2024) and is necessary to reproduce the results of the study.

The data was generated as part of Salas et al. 2023. The annotation is based on the Xenium cell segmentation. Processing and annotation was performed using scanpy. For details please refer to the publication.
DOI: 10.5281/zenodo.13821309
title: Sainsc: supporting data

description: AnnData file with annotated segmentation-based cells from Xenium Brain slices.

The cell annotation is used to generate the cell-type signatures and compare the cell-type assignment of Sainsc on the Xenium brain dataset (see Müller-Bötticher et al. 2024) and is necessary to reproduce the results of the study.

The data was generated as part of Salas et al. 2023. The annotation is based on the Xenium cell segmentation. Processing and annotation was performed using scanpy. For details please refer to the publication.
DOI: 10.5281/zenodo.10058162
title: Numerical data set belonging to: 'A Finite Volume Parallel Adaptive Mesh Refinement Method for Solid-Liquid Phase'

description: This data set corresponds to the paper 'A Finite Volume Parallel Adaptive Mesh Refinement Method for Solid-Liquid Phase Change', submitted to Numerical Heat Transfer, Part A: Applications. The numerical data is included in VTK format (to be read by paraView) for the following cases:
1) 2D Gallium melting in a rectangular cavity (70x50 elements, 140x100 elements, 280x200 elements, 560x400 elements, 1120x800 elements and adaptive mesh)
2) 3D Gallium melting in a hexagonal cavity (adaptive mesh)
3) 2D freeze-plug (both steady-state and melting transient): 110x300 elements, 220x600 elements, 440x1200 elements and adaptive mesh)
Due to the size of the data-set, the data has been split over 8 tar archives featuring a gzip compression. To unpack the data, run the command: cat paper_amr_data.tar.gz.* | tar xzvf -
DOI: 10.5281/zenodo.10058163
title: Numerical data set belonging to: 'A Finite Volume Parallel Adaptive Mesh Refinement Method for Solid-Liquid Phase'

description: This data set corresponds to the paper 'A Finite Volume Parallel Adaptive Mesh Refinement Method for Solid-Liquid Phase Change', submitted to Numerical Heat Transfer, Part A: Applications. The numerical data is included in VTK format (to be read by paraView) for the following cases:
1) 2D Gallium melting in a rectangular cavity (70x50 elements, 140x100 elements, 280x200 elements, 560x400 elements, 1120x800 elements and adaptive mesh)
2) 3D Gallium melting in a hexagonal cavity (adaptive mesh)
3) 2D freeze-plug (both steady-state and melting transient): 110x300 elements, 220x600 elements, 440x1200 elements and adaptive mesh)
Due to the size of the data-set, the data has been split over 8 tar archives featuring a gzip compression. To unpack the data, run the command: cat paper_amr_data.tar.gz.* | tar xzvf -
DOI: 10.15468/dl.g7hn9s
title: Occurrence Download

description: A dataset containing 223 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllastrephus albigula (Grote, 1919)"
 ]
}

 The dataset includes 223 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012479-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26588466.v1
title: Additional file 22 of The eQTL colocalization and transcriptome-wide association study identify potentially causal genes responsible for economic traits in Simmental beef cattle

description: Additional file 22: Table S2. The information of 356 RNA-seq samples and their mapping results.
DOI: 10.6084/m9.figshare.26588475
title: Additional file 25 of The eQTL colocalization and transcriptome-wide association study identify potentially causal genes responsible for economic traits in Simmental beef cattle

description: Additional file 25: Table S5. Overview of fine-mapping results in three tissues.
DOI: 10.6084/m9.figshare.26644885
title: Additional file 8 of A Bayesian spatio-temporal study of the association between meteorological factors and the spread of COVID-19

description: Additional file 8. R-Markdown file containing code to conduct analysis into the random effects in both models.
DOI: 10.6084/m9.figshare.26644885.v1
title: Additional file 8 of A Bayesian spatio-temporal study of the association between meteorological factors and the spread of COVID-19

description: Additional file 8. R-Markdown file containing code to conduct analysis into the random effects in both models.
DOI: 10.6084/m9.figshare.26644888
title: Additional file 9 of A Bayesian spatio-temporal study of the association between meteorological factors and the spread of COVID-19

description: Additional file 9. An R object that can be loaded using the readRDS command. The loaded object is a binary matrix used to define neighbouring LADs in the extended model.
DOI: 10.6084/m9.figshare.26588478
title: Additional file 26 of The eQTL colocalization and transcriptome-wide association study identify potentially causal genes responsible for economic traits in Simmental beef cattle

description: Additional file 26: Table S6. TWAS results for 11 agronomic traits in three tissues.
DOI: 10.6084/m9.figshare.26644888.v1
title: Additional file 9 of A Bayesian spatio-temporal study of the association between meteorological factors and the spread of COVID-19

description: Additional file 9. An R object that can be loaded using the readRDS command. The loaded object is a binary matrix used to define neighbouring LADs in the extended model.
DOI: 10.6084/m9.figshare.26644891.v1
title: Additional file 10 of A Bayesian spatio-temporal study of the association between meteorological factors and the spread of COVID-19

description: Additional file 10. An R object that can be loaded using the readRDS command. The loaded object is a binary matrix used to define neighbouring LADs in the original model.
DOI: 10.6084/m9.figshare.26644894
title: Additional file 11 of A Bayesian spatio-temporal study of the association between meteorological factors and the spread of COVID-19

description: Additional file 11. A zipped-folder containing the shapefiles required to create the maps of English LADs.
DOI: 10.6084/m9.figshare.26588463.v1
title: Additional file 21 of The eQTL colocalization and transcriptome-wide association study identify potentially causal genes responsible for economic traits in Simmental beef cattle

description: Additional file 21: Table S1. The information of GWAS results for 21 agronomic traits.
DOI: 10.15468/dl.v235w4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.079174 -32.270418, 149.079174 -32.274909, 149.08142 -32.274909, 149.08142 -32.270418, 149.079174 -32.270418))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065746-240626123714530/datasets/export for details.
DOI: 10.15468/dl.p2fkkb
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((145.086144 -36.598072, 145.086144 -36.600318, 145.083898 -36.600318, 145.083898 -36.607056, 145.092881 -36.607056, 145.092881 -36.609301, 145.095127 -36.609301, 145.095127 -36.600318, 145.092881 -36.600318, 145.092881 -36.602564, 145.088389 -36.602564, 145.088389 -36.598072, 145.086144 -36.598072)), ((145.095127 -36.600318, 145.099618 -36.600318, 145.099618 -36.598072, 145.095127 -36.598072, 145.095127 -36.600318)))"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065747-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26644960.v1
title: Additional file 8 of Insights into genetic diversity and phenotypic variations in domestic geese through comprehensive population and pan-genome analysis

description: Additional file 8: Table S5. Signals in the SNP-GWAS analysis.
DOI: 10.6084/m9.figshare.26644963
title: Additional file 9 of Insights into genetic diversity and phenotypic variations in domestic geese through comprehensive population and pan-genome analysis

description: Additional file 9: Table S6. Shell gene GO enrichment analysis.
DOI: 10.6084/m9.figshare.26588508.v1
title: Additional file 1 of Unravelling the genetic basis of retinal dystrophies in Pakistani consanguineous families

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26588508
title: Additional file 1 of Unravelling the genetic basis of retinal dystrophies in Pakistani consanguineous families

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26564271.v1
title: Additional file 1 of Genome sequencing and comparative genomic analysis of bovine mastitis-associated Staphylococcus aureus strains from India

description: Additional file 1: Table S1. Salient features of Staphylococcus aureus genomes sequenced in this study
DOI: 10.6084/m9.figshare.26644948
title: Additional file 4 of Insights into genetic diversity and phenotypic variations in domestic geese through comprehensive population and pan-genome analysis

description: Additional file 4: Table S1. Samples newly sequenced in this study.
DOI: 10.6084/m9.figshare.26644951
title: Additional file 5 of Insights into genetic diversity and phenotypic variations in domestic geese through comprehensive population and pan-genome analysis

description: Additional file 5: Table S2. Resequencing data downloaded in this study.
DOI: 10.6084/m9.figshare.26644951.v1
title: Additional file 5 of Insights into genetic diversity and phenotypic variations in domestic geese through comprehensive population and pan-genome analysis

description: Additional file 5: Table S2. Resequencing data downloaded in this study.
DOI: 10.6084/m9.figshare.26644954
title: Additional file 6 of Insights into genetic diversity and phenotypic variations in domestic geese through comprehensive population and pan-genome analysis

description: Additional file 6: Table S3. Putative domestication selected regions.
DOI: 10.6084/m9.figshare.26644954.v1
title: Additional file 6 of Insights into genetic diversity and phenotypic variations in domestic geese through comprehensive population and pan-genome analysis

description: Additional file 6: Table S3. Putative domestication selected regions.
DOI: 10.13140/rg.2.2.30385.51047
title: poachers violating May 2 2021 DSCF5684 (2)