cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21293721
title: Supplementary Material for: Sex differences in health conditions associated with sexual assault in a large hospital population

description: Introduction: Sexual assault is an urgent public health concern with both immediate and long-lasting health consequences, affecting 44% of women and 25% of men during their lifetimes. Large studies are needed to understand the unique healthcare needs of this patient population. Methods: We mined clinical notes to identify patients with a history of sexual assault in the electronic health record (EHR) at Vanderbilt University Medical Center (VUMC), a large university hospital in the Southeastern United States, from 1989 to 2021 (N=3,376,424). Using a phenome-wide case-control study, we identified diagnoses co-occurring with disclosures of sexual assault. We performed interaction tests to examine whether sex modified any of these associations. Association analyses were restricted to a subset of patients receiving regular care at VUMC (N=833,185). Results: The phenotyping approach identified 14,496 individuals (0.43%) across the VUMC-EHR with documentation of sexual assault and achieved a positive predictive value of 93.0% (95% CI=85.6%-97.0%), determined by manual patient chart review. Out of 1,703 clinical diagnoses tested across all subgroup analyses, 465 were associated with sexual assault. Sex-by-trauma interaction analysis revealed 55 sex-differential associations and demonstrated increased odds of psychiatric diagnoses in male survivors. Discussion / Conclusion: This case-control study identified associations between disclosures of sexual assault and hundreds of health conditions, many of which demonstrated sex-differential effects. The findings of this study suggest that patients who have experienced sexual assault are at risk for developing wide-ranging medical and psychiatric comorbidities and that male survivors may be particularly vulnerable to developing mental illness.
DOI: 10.13140/rg.2.2.24831.89768
title: Optical-table outcomes of the paper "On entangled-photons trajectories vectorization and its consequences".
DOI: 10.18112/openneuro.ds004197.v1.0.5
title: Bimodal dataset on Inner speech
DOI: 10.6084/m9.figshare.21656402
title: Fly Data - Aboufares et al BMC Biology 2023.zip

description: Fly data repository for Aboufares et al. BMC Biology 2023. This dataset contains raw and processed Drosophila sleep and wake activity of Linker flies and relative wild type flies. Fly stocks and crosses were maintained and tested on standard Drosophila medium at 25°C, 70% relative humidity with a 12h:12h LD cycle. For the experimental line UAS-linker flies were crossed to the pan-neuronal driver line elav-GAL4 (BL8760; Bloomington Drosophila Stock Center, IN, USA) and controls were generated by crossing Gal4 promoter and UAS responder lines to Canton-S w- (Dr Scott Waddell, University of Oxford, UK). Individual male progeny flies were collected between two to four days post eclosion and loaded in the Drosophila Activity Monitor system (DAM2, Trikinetics Inc., Waltham, MA, USA) placed inside a light- and temperature-controlled incubator. Locomotor data was collected in 1 min bins and sleep was defined as five or more minutes of inactivity. Sleep parameters were quantified in MATLAB using the SCAMP script. Baseline activity and sleep measurements were averaged over the four days of LD, and further split into the day (i.e. when lights were on) and night (i.e. lights off) components. Sleep deprivation was performed by placing the DAM monitors for both control and experimental flies on a shaker controlled by a timer. Flies were sleep deprived for the whole 12 h night phase of day five by activating the shaker for 5s in every 1 min and followed by a day of recovery. Flies that had died before the end of the experiment were removed from the analysis.
DOI: 10.25919/0xw9-qv57
title: Parkes pulsar observations with undefined project IDs for 2022OCTS_07

description: Parkes pulsar observations with undefined project IDs for 2022OCTS. This collection contains observations from project ID PX094.
DOI: 10.25919/2qms-2c87
title: Parkes observations for project P1170 semester 2022OCTS_08

description: We request 15.5 hours of observations with the Parkes UWL receiver to search for giant pulses (GPs) in all seven pulsars in the Southern sky which are known to exhibit this phenomenon. The UWL receiver is particularly well-suited to such a study, since some GPs from known emitters have been found to be very narrow-band and so the observed emission rate is likely to be highly frequency-dependent. Additionally, the wide bandwidth allows one to detect spectral structures such as the 'banding' effect recently observed in GPs from some pulsars, similar to that observed in the spectra of fast radio bursts. These observations should provide a wealth of information about the underlying GP emission mechanism, and a stringent test of current theories.
DOI: 10.21954/ou.rd.21324549
title: DMPP-3/HD42936 Data files

description: <strong>HD42936_TERRA_RV.txt : </strong>contains the HARPS-TERRA reduced radial velocities for this system. The columns are Time (BJD-2450000), Radial Velocity, Error on RV, and dataset. TERRA uses a template matching process to extract radial velocities in a more accurate manner. For more information see<em> Anglada-Escudé G., Butler R. P., 2012, ApJS, 200, 15</em> <br> <strong>HD42936_DRS_BIS.txt, HD42936_DRS_FWHM.txt, HD42936_DRS_CCF_contrast.txt: </strong>these files contain the ancillary measurements from HARPS spectra, originating from the HARPS data reduction software (DRS). The full width half max (FWHM), bisector inverse slope (BIS) and contrast are measured from the cross-correlation function approach used in extracting radial velocities. These files have columns of: FWHM: Time (BJD); Value (km/s); error (km/s) BIS: Time (BJD-2400000); Value (m/s); error (m/s) Contrast: Time (BJD); Value (%, dimensionless); error (%, dimensionless) <br> <strong>HD42936_corrected_FWHM.txt: </strong>FWHM values after correction, where 4 outlying points have been removed in total, as well as removing a polynomial trend evident in HARPS pre fibre upgrade points, and a fibre upgrade related offset. For information on this trend, see <em>Costes J. C., et al., 2021, MNRAS, 505, 830.</em> The columns of this file are: Time (BJD); Median Subtracted FWHM value (km/s); FWHM error (km/s) <br> <strong>HD42936_CaHK_JB.txt, HD42936_Halpha_JB.txt, HD42936_NaD1_JB.txt, HD42936_NaD2_JB.txt, HD42936_NaD1D2_JB.txt: </strong>Activity time series values, reduced from publicly available HARPS spectra (ESO archive). We have extracted line strengths for Calcium II H and K, Hydrogen alpha, Sodium D lines 1, 2, and 1&2 combined. These have been extracted using optimised, uniform (rectangular) line summing, with differing line core respective passband half widths. 0.3 [Angstroms] for Ca H, Na D1 & D2. 0.25 [Angstroms] for Hydrogen alpha. 0.2 [Angstroms] for Ca K. For further information on the reduction process used, see <em>Barnes J. R., Haswell C. A., Staab D., Anglada-Escudé G., 2016, MNRAS,<br> 462, 1012.</em> The columns of these files are in the format of: Time (BJD-2400000); line strength value (dimensionless); Error on value (dimensionless). <br> <br> <br>
DOI: 10.13140/rg.2.2.10361.54880
title: Data of the paper: On entangled-photons trajectories vectorization and its consequences.
DOI: 10.13140/rg.2.2.20427.87844
title: Data of the paper: On entangled-photons trajectories vectorization and its consequences.
DOI: 10.6084/m9.figshare.21550447
title: Potential prognostic markers of retained placenta in dairy cows identified by plasma metabolomics coupled with clinical laboratory indicators

description: The complex etiopathology of retained placenta (RP) and hazards associated with it has made it crucial for researchers and clinical veterinarians to study pathogenesis, early-warning diagnosis, and treatment. This study aimed to screen the potential prognostic markers of RP in dairy cows using plasma metabolomics coupled with clinical laboratory indicators. Blood samples were collected from 260 dairy cows at 21, 14, 7, and 0 days before parturition and 7, 14, and 21 days after parturition. Consequently, 10 healthy cows and 10 cows with RP with similar parity, body condition score, and age were included in the study. The changes in clinical laboratory indicators of the enrolled cows from 21 before parturition to 21 days after parturition were assessed. After initial overview of the multivariate statistical data using PCA analysis, the data were subjected to orthogonal partial least-squares discriminant analysis. Compared with cows with RP at 7 days before parturition, the levels of endothelin and 6-keto-prostaglandin F1α were increased in healthy cows, while the level of estradiol and progesterone decreased. Adenine dinucleotide phosphate, hypoxanthine, guanine dinucleotide phosphate, inosine monophosphate, and L-arginine were revealed as potential prognostic markers of cows with RP at 7 days before parturition involved in the regulation of taste transduction, purine and glutathione metabolism, and autophagy. The best period for the early-warning diagnosis of RP in dairy cows is 7 days before parturition, and purine metabolism and autophagy may play a vital role in the occurrence and development of RP in dairy cows.
DOI: 10.6084/m9.figshare.21200958.v1
title: Dynamics of acylcarnitines, hypoglycin A, méthylènecyclopropylglycine and their metabolites in a Kladruber stallion with atypical myopathy

description: Equine atypical myopathy (AM also referred to as multiple acyl-CoA dehydrogenases deficiency [MADD]) is thought to be caused by toxins metabolized from hypoglycin A (HGA) and méthylènecyclopropylglycine (MCPrG). HGA is contained in the seeds and seedlings of the sycamore tree (<i>Acer pseudoplatanus</i>); MCPrG has so far only been confirmed in seeds. Among other things, these substances can disrupt the fatty acids β-oxidation pathway with the subsequent accumulation of certain acylcarnitines. The tentative diagnosis is based on anamnesis and clinical signs and can be verified by the detection of elevated creatine kinase activity, specific profile of acylcarnitines and the presence of HGA, MCPrG conjugates and/or their metabolites in peripheral blood and/or urine. Dry blood spots were collected for 15 days from a 3.5-year-old stallion which had been affected by AM and, as a control group, from twelve healthy horses. Two mass spectrometry methods were used for the analysis of 31 acylcarnitines, carnitine, HGA, MCPrG and their metabolites. HGA and six increased acylcarnitines were detected in the patient’s blood throughout the monitoring period. Nine acylcarnitines were strongly correlated with HGA. Multivariate statistical analysis showed a clear separation of samples from the AM horse, where the metabolic profile tended to normalization in the later days after intoxication. Due to the longer persistence in the blood, the detection of HGA and elevated acylcarnitines profile appear to be an appropriate tool to confirm the diagnosis of AM, compared to metabolic products of HGA and MCPrG even in advanced cases.
DOI: 10.6084/m9.figshare.21200958
title: Dynamics of acylcarnitines, hypoglycin A, méthylènecyclopropylglycine and their metabolites in a Kladruber stallion with atypical myopathy

description: Equine atypical myopathy (AM also referred to as multiple acyl-CoA dehydrogenases deficiency [MADD]) is thought to be caused by toxins metabolized from hypoglycin A (HGA) and méthylènecyclopropylglycine (MCPrG). HGA is contained in the seeds and seedlings of the sycamore tree (<i>Acer pseudoplatanus</i>); MCPrG has so far only been confirmed in seeds. Among other things, these substances can disrupt the fatty acids β-oxidation pathway with the subsequent accumulation of certain acylcarnitines. The tentative diagnosis is based on anamnesis and clinical signs and can be verified by the detection of elevated creatine kinase activity, specific profile of acylcarnitines and the presence of HGA, MCPrG conjugates and/or their metabolites in peripheral blood and/or urine. Dry blood spots were collected for 15 days from a 3.5-year-old stallion which had been affected by AM and, as a control group, from twelve healthy horses. Two mass spectrometry methods were used for the analysis of 31 acylcarnitines, carnitine, HGA, MCPrG and their metabolites. HGA and six increased acylcarnitines were detected in the patient’s blood throughout the monitoring period. Nine acylcarnitines were strongly correlated with HGA. Multivariate statistical analysis showed a clear separation of samples from the AM horse, where the metabolic profile tended to normalization in the later days after intoxication. Due to the longer persistence in the blood, the detection of HGA and elevated acylcarnitines profile appear to be an appropriate tool to confirm the diagnosis of AM, compared to metabolic products of HGA and MCPrG even in advanced cases.
DOI: 10.21979/n9/oy1ekv
title: On-off near-infrared absorbance based on thermal-responsive plasmonic coupling in vanadium dioxide arrays for thermochromic windows

description: Vanadium dioxide (VO2) emerges as an attractive plasmonic material due to its unique reversible thermal-responsive phase transition and the promising application in energy-saving smart windows. Here, by optimizing the geometry of VO2 nano-cylinder arrays, we demonstrate a significant performance enhancement for energy-efficient thermochromic windows. Such a performance enhancement relies on the on-off behavior of plasmonic resonance in the extremely high packing density of VO2 nano-cylinder arrays. Different from the typical plasmonic material, silver, VO2 nano-cylinders are characterized to have strong absorbance in near-infrared spectrum with significantly weaker plasmonic coupling to their neighbors, making them suitable to be arranged with a high packing density. The VO2 nano-cylinder arrays exhibit a 160% luminous transmittance increment, comparing to a flat film with the same solar modulation of ∼10%. The work provides a better understanding of the plasmonic behavior on phase-change VO2 and an efficient method to enhance smart window performance.
DOI: 10.21954/ou.rd.14357321.v1
title: Covid Chronicles: Rise in attacks on LGBT+ refugees as Kakuma Refugee Camp in Kenya is threatened with closure: April 2021

description: John S. contacted us at the Covid-19 Chronicles from the Margins project asking us to help raise awareness of the plight of LGBT+ residents and protest to UNHCR at their treatment. He has been in Kakuma camp since early 2020 and is 21 years old. In the interview below, he highlights the dangers faced by LGBT+ refugees. <br> In Kakuma. “Lives are being lost daily. We are being raped, slashed, beaten and discriminated against. It is too much!” At the same time, he values the fraternity of rainbow refugees in Block 13 at Kakuma. <br> ----- This material is part of the Covid Chronicles from the Margins project, funded by The Open University and The Hague. The project aims to highlight the impact of the pandemic on refugees, asylum seekers & undocumented migrants. <br> This item can be found on our website.
DOI: 10.21954/ou.rd.14357321
title: Covid Chronicles: Rise in attacks on LGBT+ refugees as Kakuma Refugee Camp in Kenya is threatened with closure: April 2021

description: John S. contacted us at the Covid-19 Chronicles from the Margins project asking us to help raise awareness of the plight of LGBT+ residents and protest to UNHCR at their treatment. He has been in Kakuma camp since early 2020 and is 21 years old. In the interview below, he highlights the dangers faced by LGBT+ refugees. <br> In Kakuma. “Lives are being lost daily. We are being raped, slashed, beaten and discriminated against. It is too much!” At the same time, he values the fraternity of rainbow refugees in Block 13 at Kakuma. <br> ----- This material is part of the Covid Chronicles from the Margins project, funded by The Open University and The Hague. The project aims to highlight the impact of the pandemic on refugees, asylum seekers & undocumented migrants. <br> This item can be found on our website.
DOI: 10.13140/rg.2.2.10780.97923
title: Data of the paper: On entangled-photons trajectories vectorization and its consequences
DOI: 10.24417/bmdc.be:dataset:1921
title: PMPZ: Sorption data in the Southern Bight of the North Sea 1970-1976

description: Missing
DOI: 10.13140/rg.2.2.25880.47363
title: Data of the paper: On entangled-photons trajectories vectorization and its consequences
DOI: 10.5283/epub.53131
title: Daten zur Dissertation "Resonant Raman spectroscopy of low-dimensional semiconductor structures"

description: Zusammenstellung der in der Arbeit verwendeten und im Text erwähnten Messdaten
DOI: 10.34740/kaggle/dsv/4631331
title: COVID Vaccination in World (updated daily)
DOI: 10.17028/rd.lboro.21655730
title: Replication Materials: Distributing democratic influence: external efficacy and the preferred influence of policy winners and losers

description: Replication materials (data and R script) for the article "Distributing democratic influence: external efficacy and the preferred influence of policy winners and losers", published in the International Journal of Public Opinion Research.
DOI: 10.3886/e148522
title: Data and Code for: Enhancing the Efficacy of Teacher Incentives through Framing: A Field Experiment

description: In a field experiment, we provide financial incentives to teachers framed either as gains, received at the end of the year, or as losses, in which teachers receive upfront bonuses that must be paid back if their students do not improve sufficiently. Pooling two waves of the experiment, loss-framed incentives improve math achievement by an estimated 0.124 standard deviations (σ) with large effects in the first wave and no effects in the second wave. Effects for gain framed incentives are smaller and not statistically significant, approximately 0.051σ. We find suggestive evidence that the effects on teacher value added persist post-treatment. (JEL C93, D91, I21, J33, M52)
DOI: 10.21979/n9/ftc5sr
title: Self-Assembled VO2 Mesh Film-Based Resistance Switches with High Transparency and Abrupt ON/OFF Ratio

description: Vanadium dioxide, a well-known phase transition material with abrupt resistance change during its transition temperature, is herein used to fabricate the transparent mesh film onto a glass slide through self-assembly mesh printing. A record high ON/OFF ratio up to 104 is achieved together with high visible transmittance of 86% compared to the normal glass slide with visible transmittance at 88%. The high transparent properties make the resistive switches applicable for next-generation electronics, such as see-through computing device and beyond. A simple and scalable mesh printing approach-integrated phase change material may provide a promising way to fabricate transparent resistance switches for next-generation electronics.
DOI: 10.3886/e148522v1
title: Data and Code for: Enhancing the Efficacy of Teacher Incentives through Framing: A Field Experiment

description: In a field experiment, we provide financial incentives to teachers framed either as gains, received at the end of the year, or as losses, in which teachers receive upfront bonuses that must be paid back if their students do not improve sufficiently. Pooling two waves of the experiment, loss-framed incentives improve math achievement by an estimated 0.124 standard deviations (σ) with large effects in the first wave and no effects in the second wave. Effects for gain framed incentives are smaller and not statistically significant, approximately 0.051σ. We find suggestive evidence that the effects on teacher value added persist post-treatment. (JEL C93, D91, I21, J33, M52)
DOI: 10.6084/m9.figshare.21655967.v1
title: matorix_sheep_database_top1000.csv

description: Sheep derived primary wild type cells and comparison with multiple organs
DOI: 10.13140/rg.2.2.16653.00483
title: REDUCCIÓN DE LOS RESIDUOS POR EMPAQUES DE ALIMENTOS DEBIDO A LOS DEFICIENTES MODOS DE ALMACENAMIENTO Y PRESERVACIÓN HABITUAL
DOI: 10.6084/m9.figshare.21655698.v1
title: data_figures.zip from H-mode transition in the TJ-II stellarator plasmas

description: Since the first H-mode transitions were observed in TJ-II plasmas in 2008, an extensive experimental effort has been done aiming at better physics understanding of confinement transitions. In this article, an overview of the main findings related to the L-H transition in TJ-II is presented including how the radial electric field is driven, what are the possible mechanisms for turbulence suppression and what are the related temporal and spatial scales that can impact the transition. The trigger of the L-H transition in TJ-II plasmas is found to be more correlated with the development of fluctuating <i>E</i>×<i>B</i> flows than with steady-state <i>E</i><sub><i>r</i></sub> effects, pointing to the role played by zonal flows in mediating the transition. Experimental evidence supporting the predator–prey relationship between turbulence and flows as the basis for the L-H transition, found for the first time in TJ-II, reinforces this conclusion. Besides, the reduction in the turbulent transport at the transition is detected at the barrier region but also in a wider radial range with weak or even zero <i>E</i>×<i>B</i> flow shear, which points to other mechanisms beyond the turbulence suppression by local sheared flows.This article is part of the theme issue ‘H-mode transition and pedestal studies in fusion plasmas’.
DOI: 10.6084/m9.figshare.21655691.v1
title: Busia Data

description: Busia Data for sorghum farmers regarding Agrometeorological Information and climate change
DOI: 10.6084/m9.figshare.21655841.v1
title: Model forecast, source contribution and scenario analysis

description: This document contains data from the simulations carried out with the Decision Support System software developed for air quality management in Delhi, India.
DOI: 10.6084/m9.figshare.21656780
title: Towards a Data-Driven Theory of Narrativity

description: Data and code accompanying article: Andrew Piper and Sunyam Bagga, "Towards a data-driven theory of narrativity," New Literary History (2023).
DOI: 10.6084/m9.figshare.21655550.v1
title: subjects.txt

description: Subject numbers (n=1516)
DOI: 10.13140/rg.2.2.13454.84809
title: REDUCCIÓN DE LOS RESIDUOS POR EMPAQUES DE ALIMENTOS DEBIDO A LOS DEFICIENTES MODOS DE ALMACENAMIENTO Y PRESERVACIÓN HABITUAL
DOI: 10.21954/ou.rd.14371253
title: Covid Chronicles: It All Started Because of a Face Mask

description: Funmi is a Nigerian asylum seeker, an ex headteacher with two teenage children. She is very busy as both a community activist and a student studying for a Law degree. This account is of the successive problems that led on from having too much on her mind and forgetting her face mask. <br> ----- This material is part of the Covid Chronicles from the Margins project, funded by The Open University and The Hague. The project aims to highlight the impact of the pandemic on refugees, asylum seekers & undocumented migrants. <br> This item can be found on our website. <br>
DOI: 10.6084/m9.figshare.21651419.v2
title: tests_third

description: third zip collection of fuzzing
DOI: 10.5517/ccdc.csd.cc29ynb8
title: CCDC 2143660: Experimental Crystal Structure Determination

description: Related Article: Qian-You Wang, Zhi-Bing Sun, Meng Zhang, Shu-Na Zhao, Peng Luo, Chun-Hua Gong, Wen-Xiao Liu, Shuang-Quan Zang|2022|J.Am.Chem.Soc.|144|21046|doi:10.1021/jacs.2c05176
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.21651902
title: understand_analysis

description: analysis of 2 programs with understand tool
DOI: 10.6084/m9.figshare.21651902.v2
title: understand_corpus

description: analysis of 2 programs with understand tool