DOI: 10.5281/zenodo.15136053
title: Table 1 in Description of unrecorded bacterial species belonging to the phylum Actinobacteria in Korea

description: Table 1. The taxonomic affiliations of isolates belonging to the phylum Actinobacteria.
Order*FamilyGenusStrain IDNIBR IDMost closely related speciesSimilarity (%)Isolation Source/Region† MediumIncubation conditionBifidobacterialesBifidobacteriaceaeBifidobacteriumLPB0331NIBRBAC000503355B. longum subsp. longum99.9A.I./CDSAB30°C, 3dBogoriellalesBogoriellaceaeGeorgeniaN20NIBRBAC000503416G. satyanarayanai99.7G.S./GbR2A25°C, 3dBrevibacterialesBrevibacteriaceaeBrevibacteriumG24 G9 G37NIBRBAC000503412 NIBRBAC000503403 NIBRBAC000503413B. avium B. sandarakinum B. siliguriense98.9 98.8 98.9G.S./Gb G.S./Gb G.S./GbR2A R2A R2A25°C, 3d 25°C, 3d 25°C, 3dCellulomonadalesActinotaleaceaeActinotalea19D1G4NIBRBAC000503262A. ferrariae99.0R.S./Gw†MH30°C, 4dOerskoviaceaeOerskovia19D1L6NIBRBAC000503263O. jenensis100.0R.S./Gw†MH30°C, 4dDermabacteralesDermabacteraceaeBrachybacteriumG56NIBRBAC000503405B. alimentarium99.6G.S./GbR2A25°C, 3dDermatophilalesIntrasporangiaceaePedococcus13H­3NIBRBAC000503224P. soli99.5M.S./Gw†R2A30°C, 3dAgrococcus19D1A19 19D1A72NIBRBAC000503254 NIBRBAC000503256A. citreus A. versicolor99.8 99.4R.S./Gw† R.S./Gw†MH MH30°C, 4d 30°C, 4dAgromycesG36 CAU 1605NIBRBAC000503404 NIBRBAC000503252A. fucosus A. mangrove99.9 99.2G.S./Gb T.F./GSIR2A MA25°C, 3d 30°C, 3dLeucobacterN14NIBRBAC000503414L. massiliensis100.0G.S./GbR2A25°C, 3dMicrobacterialesMicrobacteriaceaeMicrobacteriumKR3 19D1C16 19D1A9 SO98 LPB0322 SO111 N40 BSSP­R25NIBRBAC000503401 NIBRBAC000503259 NIBRBAC000503253 NIBRBAC000503304 NIBRBAC000503354 NIBRBAC000503305 NIBRBAC000503417 NIBRBAC000503329M. flavum M. invictum M. lemovicicum M. murale M. nanhaiense M. shaanxiense M. thalassium M. trichothecenolyticum100.0 98.8 100.0 99.6 99.8 99.1 99.0 99.2F.F./GSI R.S./Gw† R.S./Gw† F.S./Gb S.S./CDS F.S./Gb G.S./Gb T.F./CDSR2A MH MH R2A R2A TSA R2A R2A25°C, 3d 30°C, 4d 30°C, 4d 25°C, 3d 25°C, 3d 25°C, 3d 25°C, 3d 25°C, 3dMycetocola19D2C13NIBRBAC000503269M. manganoxydans99.1R.S./Gw†MH30°C, 4dMicrococcalesMicrococcaceaeArthrobacter19D2A1NIBRBAC000503267A. tumbae99.6R.S./Gw†MH30°C, 4dPaenarthrobacter13H­2NIBRBAC000503223P. ilicis99.6M.S./Gw†R2A30°C, 3dFamilyIsolationPseudarthrobacter19D1F19 JBTF­M16NIBRBAC000503260 NIBRBAC000503335P. phenanthrenivorans P. polychromogenes99.5 99.3R.S./Gw† T.F./GSIMH MA30°C, 4d 30°C, 2dMicrococcalesMicrococcaceaeRothiaLPB0310 KYW1971NIBRBAC000503349 NIBRBAC000503307R. aeria R. amarae100.0 99.9H.S./GSI S.W./JnBA MA37°C, 3d 25°C, 2dLongisporaR21NIBRBAC000503218L. urticae99.1F.S./Gw†R2A30°C, 3dMicromonosporalesMicromonosporaceaeR_77NIBRBAC000503392M. avicenniae99.0F.S./CDSISP730°C, 3dMicromonosporaG92NIBRBAC000503406M. oryzae100.0G.S./GbR2A25°C, 3dBT360NIBRBAC000503002M. schwarzwaldensis99.6F.S./JjR2A25°C, 3dDietziaceaeDietziaSR3NIBRBAC000503402D. lutea99.2F.F./GSIR2A25°C, 3dGordoniaceaeWilliamsiaFS100NIBRBAC000503294W. limnetica100.0F.S./JnR2A25°C, 3dMycobacteriaceaeMycolicibacteriumS5NIBRBAC000503408M. wolinskyi99.0F.S./GbR2A25°C, 3dMycobacteriales19D2V10NIBRBAC000503270N. alba99.5R.S./Gw†MH30°C, 4dNocardiaceaeNocardia19D1S1 19D1V24 JDB110NIBRBAC000503264 NIBRBAC000503272 NIBRBAC000503295N. grenadensis N. nova N. tengchongensis99.4 99.8 99.7R.S./Gw† R.S./Gw† F.S./Jn†MH MH TSA30°C, 4d 30°C, 4d 25°C, 4dRhodococcusR12NIBRBAC000503418R. artemisiae99.4G.S./GbR2A25°C, 3dAeromicrobiumBSSP­M28NIBRBAC000503336A. marinum98.9T.F./CDSMA25°C, 5dPropionibacterialesNocardioidaceaeMarmoricola19D1C14NIBRBAC000503258M. aquaticus99.6R.S./Gw†MH30°C, 4dNocardioidesBT343NIBRBAC000502998N. phosphati99.1F.S./JjR2A25°C, 3dBSSP­M29NIBRBAC000503328L. albidocapillata subsp.99.7T.F./CDSMA30°C, 3dPseudonocardialesPseudonocardiaceaeLentzeaalbidocapillataBT46NIBRBAC000502986L. guizhouensis99.1F.S./GwR2A25°C, 3dStreptomycetalesStreptomycetaceaeKitasatosporaMMS19­T35 LPB0280NIBRBAC000503382 NIBRBAC000503341K. purpeofusca K. xanthocidica99.9 100.0F.S./Jn F.S./GSIR2A TSA30°C, 3d 25°C, 3dStreptacidiphilusS36NIBRBAC000503409S. carbonis98.9F.S./GbR2A25°C, 3dIsolationOrder*FamilyGenusStrain IDNIBR IDMost closely related speciesSimilarity (%)Source/Region†MediumIncubation conditionR­5NIBRBAC000503388S. albogriseolus100.0R.S./Jn†R2A37°C, 3d19D2C16NIBRBAC000503276S. amakusaensis99.7R.S./Gw†MH30°C, 4dBT63NIBRBAC000502992S. aureus99.9F.S./Gw1/10LB25°C, 3d9C­1NIBRBAC000503221S. badius99.6F.S./Gw†R2A30°C, 3dSO100NIBRBAC000503306S. brevispora99.8F.S./GbR2A25°C, 4dBG138NIBRBAC000503380S. cacaoi subsp. asoensis100.0F.S./JnTSA30°C, 3dEAC34NIBRBAC000503282S. cavourensis100.0F.S./JjR2A25°C, 3d19D1L39NIBRBAC000503274S. coelescens100.0R.S./Gw†MH30°C, 4dR­9NIBRBAC000503387S. corchorusii99.0R.S./Jn†R2A30°C, 3dMMS19­T27NIBRBAC000503371S. europaeiscabiei99.2F.S./JnR2A30°C, 3d5C­2NIBRBAC000503220S. finlayi99.9C.S./GwR2A30°C, 3d5C­1NIBRBAC000503219S. formicae99.2C.S./GwR2A30°C, 3d13H­1NIBRBAC000503222S. fragilis99.9M.S./Gw†R2A30°C, 3dStreptomycetalesStreptomycetaceaeStreptomyces19D2F17 CAU 1564NIBRBAC000503277 NIBRBAC000503235S. fulvissimus S. globosus99.9 100.0R.S./Gw† S.S./GSIMH NA30°C, 4d 37°C, 3dEAC30NIBRBAC000503283S. griseorubiginosus100.0F.S./JjTSA25°C, 7dSO94NIBRBAC000503297S. hydrogenans100.0F.S./GbR2A25°C, 3d19D2S3NIBRBAC000503278S. netropsis100.0R.S./Gw†MH30°C, 4dJDB244NIBRBAC000503303S. nigrescens99.9F.S./Jn†R2A25°C, 5dR­21NIBRBAC000503389S. phaeoluteichromatogenes99.5R.S./Jn†R2A37°C, 3dDS­12NIBRBAC000503377S. populi99.2F.S./CDSR2A30°C, 3d19D1T8NIBRBAC000503275S. pratensis100.0R.S./Gw†MH30°C, 4dF­111NIBRBAC000503378S. pseudovenezuelae100.0F.S./CDSR2A30°C, 3dMMS19­T31NIBRBAC000503372S. recifensis99.8F.S./JnR2A30°C, 3dEAC17NIBRBAC000503284S. tanashiensis99.9F.S./CbR2A25°C, 3dMMS19­T12NIBRBAC000503384S. virginiae99.9F.S./JnR2A30°C, 3d19D1A31NIBRBAC000503273S. zaomyceticus99.9R.S/Gw†MH30°C, 4dCoriobacterialesCoriobacteriaceaeCollinsellaLPB0332NIBRBAC000503339C. aerofaciens99.9A.I./CDSAB30°C, 3d
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Continued.
*The order Coriobacteriales belongs to the class Coriobacteriia; the rests to the class Actinomycetia.
Abbreviations of the source: G.S., Ginseng-cultivated soil; F.S., forest soil; R.S, riverside soil; M.S., meadow soil; C.S., cave soils; T.F., tidal flat sediment; S.S., seashore sand;A.I., animal intestine; F.F., fermented food; H.S., clinical specimen; S.W., seawater.
Abbreviations of the region: Gw, Gangwon; Gb, Gyeongbuk; Jn, Jeonnam; Jj, Jeju; CDS, Chungnam/ Daejeon/Sejong; GSI, Gyeonggi/Seoul/Incheon; Cb, Chungbuk. † Denotes the ‘Protected Ecosystem and Scenery Areas.’ Abbreviations of the agar medium:AB,Anaerobe basal; BA, Blood;.ISP7, international streptomyces project medium 7; LB, Luria broth; MH, Mueller Hinton; MA, marine; R2A, Reasoner’s 2A; TSA, tryptic soy.
description: Published as part of Kim, Mi-Sun, Kim, Seung-Bum, Cha, Chang-Jun, Im, Wan-Taek, Kim, Won-Yong, Kim, Myung-Kyum, Jeon, Che-Ok, Yi, Hana, Yoon, Jung-Hoon & Seong, Hyung-Rak Kim and Chi-Nam, 2021, Description of unrecorded bacterial species belonging to the phylum Actinobacteria in Korea, pp. 25-27 in Journal of Species Research 10 (1) on page 25, DOI: 10.12651/JSR.2021.10.1.023, http://zenodo.org/record/12753239