cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12162255.v1
title: Do community seed banks contribute to the social-ecological resilience of communities? A case-study from Western Guatemala

description: Community seed banks (CSBs) are initiatives to support the conservation and use of diverse crops though locally rooted collective action. The impact of CSBs is assumed to be complex, but has not been investigated in detail. Our study addresses this gap by analysing the impact of CSBs using social-ecological resilience as theoretical framework. We focus on the western highlands of Guatemala where CSBs have been implemented since 2009. We used qualitative and quantitative methods of data collection and analysis, including focus groups, participatory workshops, and structured and semi-structured interviews conducted in the local communities with CSB members and non-members. Our results indicate that CSBs contributed to increased seed exchanges, improved access to novel crop diversity, more saving of traditional varieties, and greater information and knowledge access, use and exchange. These effects strengthened the social-ecological resilience of the local communities. The scope of action of the CSBs, however, was constrained by wider socio-economic trends, including social divisions, out-migration of youth, and a change in livelihood strategies. We conclude that for CSBs to effectively strengthen social-ecological resilience in the future, they should be continuously adapted to the local context. Conceptually, our findings call for the further evolution of the CSB concept.
DOI: 10.5523/bris.1anaxh0xxbeg22o1gfsgl50ukh
title: 3-D modelling, disparity, and ecology of the first Cambrian apex predators

description: Supplementary data accompanying the study of Cambrian radiodont frontal appendages
DOI: 10.15129/8ee4dda0-28bd-41fb-98d6-e41fd252c3d7
title: Data for: "Optimal State Choice for Rydberg Atom Microwave Sensors"

description: This dataset contains three types of data, in csv format which was created for the purposed of Figures 2, 3, 4 and 5. A Readme file attached to the data explains in detail the arragement of each file.
DOI: 10.5281/zenodo.4581941
title: Speech recognition alignments for Finnish parliament data

description: This dataset contains speech from Finnish parliament 2008-2020 plenary sessions, segmented and aligned for speech recognition training. In total, the training set has: 1.4 million samples 3100 hours of audio 460 speakers over 19 million word tokens Additionally, the upload contains 5h long development and 5h long evaluation sets described in publication 10.21437/Interspeech.2017-1115. Due to the size of the training set (~300 GB) and Zenodo upload limit (50 GB), only the development and evaluation sets are published on Zenodo. Rest of the data is available at: http://urn.fi/urn:nbn:fi:lb-2021051903 The training set comes in two parts: 2008-2016 set which is originally described in publication 10.21437/Interspeech.2017-1115. This set includes a list of samples from sessions in 2008-2014 that can be combined with the 2015-2020 set to form the 3100 hour training set. A new 2015-2020 dataset. All audio samples are single-channel, 16 kHz and 16-bit wav files. Each wav file has corresponding transcript in a .trn text file. The data is machine-extracted so there still remains small inaccuracies in the training set transcripts and possibly few Swedish samples. Development and evaluation sets have been corrected by hand. The licenses can be viewed at: http://urn.fi/urn:nbn:fi:lb-2019112822 (audio) http://urn.fi/urn:nbn:fi:lb-2019112823 (text) The code used in extraction is available at: https://github.com/aalto-speech/finnish-parliament-scripts (2008-2014, dev and eval sets) https://github.com/aalto-speech/fi-parliament-tools (2015-2020 set)
DOI: 10.5281/zenodo.4581940
title: Speech recognition alignments for Finnish parliament data

description: This dataset contains speech from Finnish parliament 2008-2020 plenary sessions, segmented and aligned for speech recognition training. In total, the training set has: 1.4 million samples 3100 hours of audio 460 speakers over 19 million word tokens Additionally, the upload contains 5h long development and 5h long evaluation sets described in publication 10.21437/Interspeech.2017-1115. Due to the size of the training set (~300 GB) and Zenodo upload limit (50 GB), only the development and evaluation sets are published on Zenodo. Rest of the data is available at: http://urn.fi/urn:nbn:fi:lb-2021051903 The training set comes in two parts: 2008-2016 set which is originally described in publication 10.21437/Interspeech.2017-1115. This set includes a list of samples from sessions in 2008-2014 that can be combined with the 2015-2020 set to form the 3100 hour training set. A new 2015-2020 dataset. All audio samples are single-channel, 16 kHz and 16-bit wav files. Each wav file has corresponding transcript in a .trn text file. The data is machine-extracted so there still remains small inaccuracies in the training set transcripts and possibly few Swedish samples. Development and evaluation sets have been corrected by hand. The licenses can be viewed at: http://urn.fi/urn:nbn:fi:lb-2019112822 (audio) http://urn.fi/urn:nbn:fi:lb-2019112823 (text) The code used in extraction is available at: https://github.com/aalto-speech/finnish-parliament-scripts (2008-2014, dev and eval sets) https://github.com/aalto-speech/fi-parliament-tools (2015-2020 set)
DOI: 10.15468/2r5tud
title: Review of Chinese littoral Thalassaphorura (Collembola: Onychiuridae), with the description of two new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Sun, Xin, Gao, Yan, Potapov, Mikhail B. (2013): Review of Chinese littoral Thalassaphorura (Collembola: Onychiuridae), with the description of two new species. Journal of Natural History 48 (9 - 10): 575-589, DOI: 10.1080/00222933.2013.839843, URL: http://dx.doi.org/10.1080/00222933.2013.839843
DOI: 10.5281/zenodo.4783491
title: The repurposing of tebipenem pivoxil as alternative therapy for severe gastrointestinal infections caused by extensively drug resistant Shigella spp.

description: <strong>dataset for The repurposing of tebipenem pivoxil as alternative therapy for severe gastrointestinal infections caused by extensively drug resistant <em>Shigella</em> spp.</strong> Elena Fernández Alvaro <sup>1*</sup>, Phat Voong Vinh <sup>2</sup>, Cristina de Cozar <sup>1</sup>, Beatriz Urones <sup>1</sup>, Alvaro Cortés <sup>1</sup>,Alan Price <sup>1</sup>, Nhu Tran Do Hoang <sup>2</sup>, Tuyen Ha Thanh <sup>2</sup>, Molly McCloskey <sup>3</sup>, Shareef Shaheen<sup> 3</sup>, Denise Dayao<sup> 4</sup>, Jaime de Mercado <sup>1</sup>, Adolfo García-Perez <sup>1</sup>, Benson Singa <sup>5</sup>, Patricia Pavlinac <sup>6</sup>, Judd Walson<sup>3</sup>, Maria Santos Martínez-Martínez <sup>1</sup>, Samuel L.M. Arnold <sup>3</sup>, Tzipori Saul <sup>4</sup>, Lluis Ballell <sup>1</sup>, and Stephen Baker <sup>7,8*</sup>
description: Abstract Background Diarrhoea remains one of the leading causes of childhood mortality globally. Recent epidemiological studies conducted in low-middle income countries (LMICs) identified Shigella spp. as the first and second most predominant agent of dysentery and moderate diarrhoea, respectively. Antimicrobial therapy is often necessary for Shigella infections; however, we are reaching a crisis point with efficacious antimicrobials. The rapid emergence of resistance against existing antimicrobials in Shigella spp. poses a serious global health problem. Methods Aiming to identify alternative antimicrobial chemicals with activity against multi-drug resistant (MDR) Shigella, we initiated a collaborative academia-industry drug discovery project, applying high throughput phenotypic screening across broad chemical diversity. Results We identified several suitable compounds with antibacterial activity against Shigella. These compounds included the oral carbapenem tebipenem, which was found to be highly potent against broadly susceptible Shigella and contemporary MDR variants. Additional in vitro screening demonstrated that tebipenem had activity against a wide range of other non-Shigella enteric bacteria. Cognisant of the risk for the development of resistance against monotherapy, we identified synergistic behaviour of two different drug combinations incorporating tebipenem. The orally bioavailable prodrug (tebipenem pivoxil) effectively cleared the gut of infecting organisms when administered in physiological doses to Shigella-infected mice and gnotobiotic piglets. Conclusions Our data highlight the utility of broad compound screening for tackling the emerging antimicrobial resistance crisis and shows that tebipenem pivoxil (licenced for paediatric respiratory tract infections in Japan) could be repurposed as an effective treatment for severe diarrhoea caused by MDR Shigella and other enteric pathogens in LMICs. Funding Tres Cantos Open Lab Foundation (projects TC239 and TC246), the Bill and Melinda Gates Foundation (grant OPP1172483) and Wellcome (215515/Z/19/Z).
DOI: 10.5281/zenodo.4783475
title: Ferromagnetism and giant magnetoresistance in zinc-blende FeAs monolayers embedded in semiconductor structures

description: Material structures containing tetrahedral FeAs bonds, depending on their density and geometrical distribution, can host several competing quantum ground states ranging from superconductivity to ferromagnetism. Here we examine structures of quasi two-dimensional (2D) layers of tetrahedral Fe-As bonds embedded with a regular interval in a semiconductor InAs matrix, which resembles the crystal structure of Fe-based superconductors. Contrary to the case of Fe-based pnictides, these FeAs/InAs superlattices (SLs) exhibit ferromagnetism, whose Curie temperature (<em>T</em><sub>C</sub>) increases rapidly with decreasing the InAs interval thickness <em>t</em><sub>InAs</sub> (<em>T</em><sub>C</sub> ~ <em>t</em><sub>InAs</sub><sup>-3</sup>), and an extremely large magnetoresistance up to 500% that is tunable by a gate voltage. Our first principles calculations reveal the important role of disordered positions of Fe atoms in the establishment of ferromagnetism in these quasi-2D FeAs-based SLs. These unique features mark the FeAs/InAs SLs as promising structures for spintronic applications.
DOI: 10.5281/zenodo.4783474
title: Ferromagnetism and giant magnetoresistance in zinc-blende FeAs monolayers embedded in semiconductor structures

description: Material structures containing tetrahedral FeAs bonds, depending on their density and geometrical distribution, can host several competing quantum ground states ranging from superconductivity to ferromagnetism. Here we examine structures of quasi two-dimensional (2D) layers of tetrahedral Fe-As bonds embedded with a regular interval in a semiconductor InAs matrix, which resembles the crystal structure of Fe-based superconductors. Contrary to the case of Fe-based pnictides, these FeAs/InAs superlattices (SLs) exhibit ferromagnetism, whose Curie temperature (<em>T</em><sub>C</sub>) increases rapidly with decreasing the InAs interval thickness <em>t</em><sub>InAs</sub> (<em>T</em><sub>C</sub> ~ <em>t</em><sub>InAs</sub><sup>-3</sup>), and an extremely large magnetoresistance up to 500% that is tunable by a gate voltage. Our first principles calculations reveal the important role of disordered positions of Fe atoms in the establishment of ferromagnetism in these quasi-2D FeAs-based SLs. These unique features mark the FeAs/InAs SLs as promising structures for spintronic applications.
DOI: 10.5517/ccdc.csd.cc261whn
title: CCDC 2027601: Experimental Crystal Structure Determination

description: Related Article: Yancheng Yu, Quanwei Yu, Simeng Liu, Chenyang Wu, Xiaojin Zhang|2020|Eur.J.Med.Chem.|211|112999|doi:10.1016/j.ejmech.2020.112999
description: Related Article: Yan-cheng Yu|2020|CSD Communication|||
DOI: 10.3886/e120772
title: Data and Code for: Enforcing Wealth Taxes in the Developing World: Quasi-Experimental Evidence from Colombia

description: This paper investigates the feasibility of wealth taxation in developing countries. It uses rich administrative data from Colombia and leverages a government-designed program for voluntary disclosures of hidden wealth, as well as the threat of detection triggered by the Panama Papers leak. There are two key findings. First, there is substantial (primarily offshore) evasion: two-fifths of the wealthiest 0.01% evade taxes, with these evaders concealing one-third of their wealth offshore. Second, strengthening enforcement can have a significant impact on wealth tax compliance, tax revenue, and progressivity. These results highlight both challenges and opportunities for wealth taxation in the developing world.
description: Colombian income and wealth taxpayers.
DOI: 10.3886/e120772v1
title: Data and Code for: Enforcing Wealth Taxes in the Developing World: Quasi-Experimental Evidence from Colombia

description: This paper investigates the feasibility of wealth taxation in developing countries. It uses rich administrative data from Colombia and leverages a government-designed program for voluntary disclosures of hidden wealth, as well as the threat of detection triggered by the Panama Papers leak. There are two key findings. First, there is substantial (primarily offshore) evasion: two-fifths of the wealthiest 0.01% evade taxes, with these evaders concealing one-third of their wealth offshore. Second, strengthening enforcement can have a significant impact on wealth tax compliance, tax revenue, and progressivity. These results highlight both challenges and opportunities for wealth taxation in the developing world.
description: Colombian income and wealth taxpayers.
DOI: 10.5066/p931n56e
title: Gas samples of Afghanistan and adjacent areas (gasafg.shp)

description: This shapefile contains points that describe the location of gas samples collected in Afghanistan and adjacent areas and the results of organic geochemical analysis.
DOI: 10.15468/embzsu
title: Prospection for predatory mites to control coconut pest mites in Thailand, with taxonomic descriptions of collected Mesostigmata (Acari)

description: This dataset contains the digitized treatments in Plazi based on the original journal article da Silva, Renan V., Narita, João Paulo Z., Vichitbandha, Patchanee, Chandrapatya, Angsumarn, Konvipasruang, Ploychompoo, Kongchuensin, Manita, de Moraes, Gilberto J. (2013): Prospection for predatory mites to control coconut pest mites in Thailand, with taxonomic descriptions of collected Mesostigmata (Acari). Journal of Natural History (J. Nat. Hist.) 48 (11 - 12): 699-719, DOI: 10.1080/00222933.2013.839842, URL: http://dx.doi.org/10.1080/00222933.2013.839842
DOI: 10.5066/p9ab4jum
title: Province Boundaries for the National Assessment of Oil and Gas - Gulf Coast Region

description: The USGS Central Region Energy Team assesses oil and gas resources of the United States. The onshore and State water areas of the United States comprise 71 provinces. Within these provinces, hydrocarbon plays or assessment units are defined and assessed. Each of these provinces is defined geologically, and most province boundaries are defined by major geologic changes. The province boundaries were drawn on the county lines that most closely followed the natural geologic boundaries.
DOI: 10.5066/p9wzwnez
title: Seismic Lines in Louisiana and Texas [gcseismicg]

description: The lines shown are those used by the USGS in developing the framework geology and models used in assessing the oil and gas resources of the Gulf Coast Region. The data set is comprised of both leased and borrowed company proprietary data. This dataset contains basic data and interpretations developed and compiled by the U.S. Geological Survey's Framework Studies and Assessment of the Gulf Coast Project. Other major sources of data include publicly available information from state agencies as well as publications of the U.S. Geological Survey and other scientific organizations. In cases where company proprietary data were used to produce various derivatives such as contour surfaces, the source is cited but the data are not displayed.
DOI: 10.5066/p9kqy4m0
title: Gulf Coast Basins and Uplifts [gcstructsg]

description: These data provide generalized outlines of major basins and uplifts in the Gulf Coast region modified after Plate 2, Principal structural features, Gulf of Mexico Basin (compiled by T.E. Ewing and R.F. Lopez) in Volume J, The Geology of North America (1991). This dataset contains basic data and interpretations developed and compiled by the U.S. Geological Survey's Framework Studies and Assessment of the Gulf Coast Project. Other major sources of data include publicly available information from state agencies as well as publications of the U.S. Geological Survey and other scientific organizations. In cases where company proprietary data were used to produce various derivatives such as contour surfaces, the source is cited but the data are not displayed.
DOI: 10.5066/p9u8eg2i
title: Orogenic Thrust Belt, Gulf of Mexico Basin [gcthrustbg]

description: These data provide the general location of the Ouachita and Appalachian structural fronts slightly modified from Plate 4, Natural resources, Gulf of Mexico Basin (compiled by A. Salvador and R. Nehring), in Volume J, The Geology of North America (1991). This dataset contains basic data and interpretations developed and compiled by the U.S. Geological Survey's Framework Studies and Assessment of the Gulf Coast Project. Other major sources of data include publicly available information from state agencies as well as publications of the U.S. Geological Survey and other scientific organizations. In cases where company proprietary data were used to produce various derivatives such as contour surfaces, the source is cited but the data are not displayed.
DOI: 10.6084/m9.figshare.14489410
title: A new species of <i>Caipirasuchus</i> (Notosuchia, Sphagesauridae) from the Late Cretaceous of Brazil and the evolutionary history of Sphagesauria

description: Sphagesauridae is a group of notosuchian crocodyliforms from the Late Cretaceous of South America characterized by highly specialized jaws and dentition. Here, we describe a new sphagesaurid from the Santo Anastácio Formation (Caiuá Group, Bauru Basin), south-east Brazil. The specimen is composed of a partial palate, neurocranium, mandible and fragmentary teeth. It represents a new species that can be assigned to <i>Caipirasuchus</i> due to the presence of a lateromedially narrow and anteroposteriorly long mandibular symphyseal region, apicobasal ridges on the posterior teeth, a diastema between D5 and D6, and a linear row of large neurovascular foramina on the lateral surface of the dentary. It differs from previously described <i>Caipirasuchus</i> species based on a ventrolaterally inclined surface of the dentaries posterior to the tooth row, a connection between the anteroventral margin of the external mandibular fenestra and the floor of the Meckelian canal, and the anterior process of the angular forming a ‘V’-shaped suture in its contact with the splenial. The results of a phylogenetic analysis of notosuchians recovered the so-called ‘advanced notosuchians’ in a clade, for which we propose a phylogenetic definition and erect the name Sphagesauria. We also recovered two more inclusive clades encompassing an array of Mesozoic notosuchians, here named Xenodontosuchia, which includes Sphagesauria + Baurusuchia, and Eunotosuchia, including Xenodontosuchia, Uruguaysuchidae and other Cretaceous forms. http://zoobank.org/urn:lsid:zoobank.org:pub:FD8D706F-9E01-4C09-BE4E-DC3BEDE151DC
DOI: 10.6084/m9.figshare.14489410.v1
title: A new species of <i>Caipirasuchus</i> (Notosuchia, Sphagesauridae) from the Late Cretaceous of Brazil and the evolutionary history of Sphagesauria

description: Sphagesauridae is a group of notosuchian crocodyliforms from the Late Cretaceous of South America characterized by highly specialized jaws and dentition. Here, we describe a new sphagesaurid from the Santo Anastácio Formation (Caiuá Group, Bauru Basin), south-east Brazil. The specimen is composed of a partial palate, neurocranium, mandible and fragmentary teeth. It represents a new species that can be assigned to <i>Caipirasuchus</i> due to the presence of a lateromedially narrow and anteroposteriorly long mandibular symphyseal region, apicobasal ridges on the posterior teeth, a diastema between D5 and D6, and a linear row of large neurovascular foramina on the lateral surface of the dentary. It differs from previously described <i>Caipirasuchus</i> species based on a ventrolaterally inclined surface of the dentaries posterior to the tooth row, a connection between the anteroventral margin of the external mandibular fenestra and the floor of the Meckelian canal, and the anterior process of the angular forming a ‘V’-shaped suture in its contact with the splenial. The results of a phylogenetic analysis of notosuchians recovered the so-called ‘advanced notosuchians’ in a clade, for which we propose a phylogenetic definition and erect the name Sphagesauria. We also recovered two more inclusive clades encompassing an array of Mesozoic notosuchians, here named Xenodontosuchia, which includes Sphagesauria + Baurusuchia, and Eunotosuchia, including Xenodontosuchia, Uruguaysuchidae and other Cretaceous forms. http://zoobank.org/urn:lsid:zoobank.org:pub:FD8D706F-9E01-4C09-BE4E-DC3BEDE151DC
DOI: 10.6084/m9.figshare.8637479
title: Identification of <i>Bacillus</i> and <i>Yersinia</i> species and hoax agents by protein profiling using microfluidic capillary electrophoresis with peak detection algorithms

description: <i>Bacillus anthracis</i> and <i>Yersinia pestis</i> are biological agents that pose an increasing concern to national security if deliberately disseminated. Hoax agents, including suspicious white powders and environmental bacterial species, can also cause disruption. In either scenario it is of high importance to rapidly and accurately identify any suspicious powder as hazardous or hoax. Protein profiling, using microfluidic capillary electrophoresis, provides a rapid (less than 40 minutes), reliable and field-based screening method. Two commonly encountered hoax agents, three <i>Bacillus</i> species (including <i>B. anthracis</i> Sterne strain), two <i>Yersinia</i> species and <i>E. coli</i> were profiled on the Experion™ System (Bio-Rad). Peak detection algorithms were developed for the identification of protein peaks in electropherograms. Boolean logic paths were then employed to predict the electrophoretic pattern of samples. Parameters assessed included variation within and between Experion™ Pro260 chips and the ability to discriminate between samples over time intervals, between operators and between field and laboratory analyses. Classification with optimal Boolean logic paths reported no misclassification with an accuracy of 100% for <i>B. anthracis</i> Sterne strain, <i>B. thuringiensis</i> (powder and culture-based), <i>B. cereus</i> and plain wheat flour. Overall there was 75% correct identification for the eight sample types tested.