cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.f25dsy
title: Occurrence Download

description: A dataset containing 1294 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acer laevigatum Wall."
 ]
}

 The dataset includes 1294 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025788-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zn5bdz
title: Occurrence Download

description: A dataset containing 5570 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"in","key":"TAXON_KEY","values":["8073364"],"matchCase":false},{"type":"equals","key":"HAS_COORDINATE","value":"true","matchCase":false},{"type":"equals","key":"HAS_GEOSPATIAL_ISSUE","value":"false","matchCase":false},{"type":"equals","key":"OCCURRENCE_STATUS","value":"PRESENT","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["FOSSIL_SPECIMEN","LIVING_SPECIMEN","HUMAN OBSERVATION","MACHINE OBSERVATION"],"matchCase":false}},{"type":"equals","key":"CONTINENT","value":"EUROPE","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"1900","matchCase":false},{"type":"lessThanOrEquals","key":"YEAR","value":"2024","matchCase":false},{"type":"greaterThanOrEquals","key":"MONTH","value":"1","matchCase":false},{"type":"lessThanOrEquals","key":"MONTH","value":"9","matchCase":false}]}

 The dataset includes 5570 records from 141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025787-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w65pzg
title: Occurrence Download

description: A dataset containing 10578 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amaranthus albus L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 10578 records from 356 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025789-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qbfghd
title: Occurrence Download

description: A dataset containing 5934 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Pl@ntNet observations",
 "Country is Croatia"
 ]
}

 The dataset includes 5934 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025790-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7ff5xg
title: Occurrence Download

description: A dataset containing 6530 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is ZOBODAT (Zoological Botanical Database)",
 "Country is Croatia"
 ]
}

 The dataset includes 6530 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025792-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a8ddhf
title: Occurrence Download

description: A dataset containing 9723 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Trawl survey data from the Jabuka Pit area (central-eastern Adriatic Sea, Mediterranean) collected between 1956 and 1971",
 "Country is Croatia"
 ]
}

 The dataset includes 9723 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025791-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25375/uct.27043813.v2
title: Data and software code for "Endothelial cells infected with Kaposi’s sarcoma-associated herpesvirus display distinct viscoelasticity and morphology"

description: Data and code supporting work presented in article.File: 01_preprocessing_macro.ijmDescription: A simplified macro outlining time-lapse image pre-processing prior to mitochondria-tracking analysis in TrackMate (Image J). Preprocessed files are saved in .tif format.<br>------------------------------------------------------------------------------------------------------------------File: 02_compute_logplot_msd.pyDescription: Python code to import csv track files, compute i-msd and e-msd (using trackpy), and plot 2 sets of data at a time (e.g. HuARLRT2 vs HuALRT2-rKSHV) of e-msd and bulk msd on the same logarithmic axis, and save plot in high resolution of 300 dpi.<br>------------------------------------------------------------------------------------------------------------------File: 03_particle_tracking_data.xlsxDescription: e-msd and powerlaw exponent data of all 4 cell lines used in the study, i.e. HuARLT2, HuARLT2-rKSHV, LEC, & LEC-rKSHV over 37.6s. MSDs are fitted between 0 and 2 s of lag time.Contents:sheet 1 (data_description)sheet 2 (MSD for Hu and HuKS)sheet 3 (MSD for LEC and LECKS)sheet 4 (MSD powerlaw exponents)------------------------------------------------------------------------------------------------------------------<br>File: 04_fit_powerlaw_plot.pyDescription: Function to compute the MSD powerlaw exponent for each eMSD between 0-2s, keeping only good fits (R^2&gt;0.7), and plot in log axes. Two sets of data can be plotted at a time, and plot saved in high resolution of 300 dpi.<br>------------------------------------------------------------------------------------------------------------------File: 05_cell_morphology_data.xlsxDescription: Cell morpholopgy data of the aspect ratio (AR), roundness (R) and Circularity (C)computed using the PHANTAST plugin and FIJI.Contents:sheet 1 (data_description)sheet 2 (Aspect ratio measurements for all 4 cell lines)sheet 3 (Roundness values for all 4 cell lines)sheet 4 (Circularity values for all 4 cells lines)------------------------------------------------------------------------------------------------------------------File: 06_compute_morpho_diff.pyDescription: Function to compute relative differences of cell morphology parameters aspect ratio, circularity, and roundness, and plot the data.------------------------------------------------------------------------------------------------------------------
DOI: 10.6084/m9.figshare.27878217
title: Appendix 1 - The Roleplay Intervention Scenarios

description: The Roleplay Intervention Scenarios for Nursing Documentation involve practical training sessions aimed at improving various aspects of nursing documentation. Each scenario focuses on a key area such as patient history-taking, SOAP note documentation, continuity of care, medication administration, cultural sensitivity, emergency case documentation, and Electronic Health Record (EHR) accuracy. Common errors addressed include missing or incomplete documentation, misclassification of patient information, delayed follow-up, medication timing discrepancies, and inadequate cultural sensitivity. The intervention methods used include traditional roleplay, digital simulations, peer feedback, reflective practice, and hands-on EHR training. Each scenario is designed to last for 2 hours, with the goal of enhancing documentation skills, improving accuracy, and ensuring timely and culturally competent records.
DOI: 10.15468/dl.63y4rc
title: Occurrence Download

description: A dataset containing 7383 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amaranthus blitoides S.Watson)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 7383 records from 274 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025793-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u62pvx
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lagochilus occultiflorus Rupr."
 ]
}

 The dataset includes 27 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025796-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rnst6w
title: Occurrence Download

description: A dataset containing 6776 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Naturalis Biodiversity Center (NL) - Botany",
 "Country is Croatia"
 ]
}

 The dataset includes 6776 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025794-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vg3tjt
title: Occurrence Download

description: A dataset containing 5474 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amaranthus bouchonii Thell.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 5474 records from 202 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025797-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zdtyc6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amaranthus crispus (Lesp. & Thévenau) A.Braun ex J.M.Coult. & S.Watson)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025799-241107131044228/datasets/export for details.
DOI: 10.15468/dl.vw8wd5
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lagochilus paulsenii Briq."
 ]
}

 The dataset includes 17 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025798-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14272/ohjpgusxughoge-uhfffaoysa-n/chmo0000601
title: heteronuclear multiple bond coherence (HMBC) (2-methyl-6-(6-methylpyridin-2-yl)pyridine)
title: InChI=1S/C12H12N2/c1-9-5-3-7-11(13-9)12-8-4-6-10(2)14-12/h3-8H,1-2H3

description: dataset for heteronuclear multiple bond coherence (HMBC)
DOI: 10.14272/ohjpgusxughoge-uhfffaoysa-n/chmo0000595
title: 13C nuclear magnetic resonance spectroscopy (13C NMR) (2-methyl-6-(6-methylpyridin-2-yl)pyridine)
title: InChI=1S/C12H12N2/c1-9-5-3-7-11(13-9)12-8-4-6-10(2)14-12/h3-8H,1-2H3

description: dataset for 13C nuclear magnetic resonance spectroscopy (13C NMR)
DOI: 10.14272/ohjpgusxughoge-uhfffaoysa-n/chmo0000604
title: heteronuclear single quantum coherence (HSQC) (2-methyl-6-(6-methylpyridin-2-yl)pyridine)
title: InChI=1S/C12H12N2/c1-9-5-3-7-11(13-9)12-8-4-6-10(2)14-12/h3-8H,1-2H3

description: dataset for heteronuclear single quantum coherence (HSQC)
DOI: 10.14272/ohjpgusxughoge-uhfffaoysa-n/chmo0000596.1
title: distortionless enhancement with polarization transfer (DEPT) (2-methyl-6-(6-methylpyridin-2-yl)pyridine)
title: InChI=1S/C12H12N2/c1-9-5-3-7-11(13-9)12-8-4-6-10(2)14-12/h3-8H,1-2H3

description: dataset for distortionless enhancement with polarization transfer (DEPT)
DOI: 10.14272/ohjpgusxughoge-uhfffaoysa-n/chmo0000593
title: 1H nuclear magnetic resonance spectroscopy (1H NMR) (2-methyl-6-(6-methylpyridin-2-yl)pyridine)
title: InChI=1S/C12H12N2/c1-9-5-3-7-11(13-9)12-8-4-6-10(2)14-12/h3-8H,1-2H3

description: dataset for 1H nuclear magnetic resonance spectroscopy (1H NMR)
DOI: 10.14272/ohjpgusxughoge-uhfffaoysa-n/chmo0000596
title: distortionless enhancement with polarization transfer (DEPT) (2-methyl-6-(6-methylpyridin-2-yl)pyridine)
title: InChI=1S/C12H12N2/c1-9-5-3-7-11(13-9)12-8-4-6-10(2)14-12/h3-8H,1-2H3

description: dataset for distortionless enhancement with polarization transfer (DEPT)
DOI: 10.14272/ohjpgusxughoge-uhfffaoysa-n.1
title: 2-methyl-6-(6-methyl-2-pyridyl)pyridine
title: InChI=1S/C12H12N2/c1-9-5-3-7-11(13-9)12-8-4-6-10(2)14-12/h3-8H,1-2H3

description: This is a physical chemical entity[CHEBI_24431] associated with a molecule[CHEBI_25367].
 The molecule[CHEBI_25367] can be described by the following structural desciptors[cheminf_000085]:
 InChI descriptor[cheminf_000113]: InChI=1S/C12H12N2/c1-9-5-3-7-11(13-9)12-8-4-6-10(2)14-12/h3-8H,1-2H3, and canonical SMILES descriptor[cheminf_000007]: Cc1cccc(n1)c1cccc(n1)C, and by the IUPAC name[cheminf_000107]: 2-methyl-6-(6-methylpyridin-2-yl)pyridine.
 
 The physical chemical entity[CHEBI_24431] has a component solvent[CHEBI_46787] which is described by the canonical SMILES descriptor[cheminf_000007]:
 
 The physical chemical entity[CHEBI_24431] has the following Sample ID as registered in the research data repository chemotion (www.chemotion-repository.net, https://doi.org/10.25504/FAIRsharing.iagXcR): CRS-48764

 The physical chemical entity[CHEBI_24431] can be described by the physical descriptors [CHEMINF_000025]:
 Melting point descriptor[CHEMINF_000256]: 
 Boiling point descriptor[CHEMINF_000257]: 
 Refractive index descriptor[CHEMINF_000253]:

 The physical chemical entity[CHEBI_24431] can be further described by the following assays[OBI:0000070][CHMO:0001133]:
 
 CHMO:0000599 | correlation spectroscopy (COSY)
 
 CHMO:0000596 | distortionless enhancement with polarization transfer (DEPT)
 
 CHMO:0000596 | distortionless enhancement with polarization transfer (DEPT)
 
 CHMO:0000593 | 1H nuclear magnetic resonance spectroscopy (1H NMR)
 
 CHMO:0000595 | 13C nuclear magnetic resonance spectroscopy (13C NMR)
 
 CHMO:0000604 | heteronuclear single quantum coherence (HSQC)
 
 CHMO:0000601 | heteronuclear multiple bond coherence (HMBC)
 
 The physical chemical entity[CHEBI_24431] was deposited to the Molecule Archive of the Karlsruhe Insitute of Technology (KIT) with the following Sample ID: 

 Used ontologies:
 CHEBI - Chemical Entities of Biological Interest
 CHEMINF - chemical information ontology (information entities about chemical entities)
 CHMO - Chemical Methods Ontology
 OBI - Ontology for Biomedical Investigations
DOI: 10.14272/ohjpgusxughoge-uhfffaoysa-n/chmo0000599
title: correlation spectroscopy (COSY) (2-methyl-6-(6-methylpyridin-2-yl)pyridine)
title: InChI=1S/C12H12N2/c1-9-5-3-7-11(13-9)12-8-4-6-10(2)14-12/h3-8H,1-2H3

description: dataset for correlation spectroscopy (COSY)
DOI: 10.34740/kaggle/dsv/9972172
title: Global Genomic Neurofibromatosis Neoplasia
DOI: 10.15468/dl.ecquqd
title: Occurrence Download

description: A dataset containing 11545 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amanita muscaria (L.) Lam.",
 "Country is Germany",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 11545 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025800-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.334men
title: Occurrence Download

description: A dataset containing 264 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nilgiritragus hylocrius (Ogilby, 1838)"
 ]
}

 The dataset includes 264 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025801-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s6sxbf
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lagochilus pubescens Vved."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025802-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hk3wn7
title: Occurrence Download

description: A dataset listing the 900 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Italy",
 "GadmGid is ITA.10.3.52_1",
 "GbifRegion is Europe and Central Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 900 records were derived from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025775-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nvbds7
title: Occurrence Download

description: A dataset listing the 7 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thermomyces lanuginosus Tsikl."
 ]
}

 The dataset's 7 records were derived from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025782-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n9bdpb
title: Occurrence Download

description: A dataset listing the 1058 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Italy",
 "GadmGid is ITA.20.4.86_1",
 "GbifRegion is Europe and Central Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 1058 records were derived from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025778-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5639kh6g
title: MassIVE MSV000096483 - Lipidome analysis by shotgun lipidomics on an Orbitrap Fusion mass spectrometer Almeida et al 2015
title: Lipidomics data for mouse hippocampus and cerebellum. Details are described in the publication https://pubmed.ncbi.nlm.nih.gov/25391725/ In short, 16 analyses were done in positive and negative ion mode of lipid extracts of hippocampus and cerebellum as well as blank samples. The analysis was done by IDA-based MSaLL analysis using both hcd and cid fragmentation for each precursor ion, all bundled in one .raw file. MSaLL data was searched using ALEX123 and further processed by LipidProphet to identify lipid molecules together with ALEX confidence score values.
DOI: 10.15468/dl.v7rqj9
title: Occurrence Download

description: A dataset listing the 3225 species recorded in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Italy",
 "GadmGid is ITA.16.7.26_1",
 "GbifRegion is Europe and Central Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 3225 records were derived from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025777-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27878538
title: Appendices

description: This research investigates the effectiveness of an intervention program aimed at improving nursing documentation practices, focusing on enhancing the quality, accuracy, and cultural sensitivity of records. The study incorporates a range of tools and methods, including roleplay scenarios, digital simulations, and hands-on exercises, which address common documentation errors such as incomplete patient histories, misclassification in SOAP notes, and delayed or inaccurate follow-up entries. Assessment tools like the Documentation Quality Assessment Tool (DQAT), Nursing Documentation Self-Efficacy Scale (NDSES), and NASA Task Load Index (NASA-TLX) were utilized to evaluate pre- and post-intervention improvements in documentation skills, confidence, and cognitive load. The results indicate significant gains in documentation quality, including improved assessment completeness, diagnostic accuracy, and the timeliness of records, with the experimental group showing substantial and sustained improvements. These findings highlight the effectiveness of structured, roleplay-based interventions and digital tools in fostering better nursing documentation practices, ultimately enhancing patient care and safety.
DOI: 10.15468/dl.v4b9w3
title: Occurrence Download

description: A dataset containing 631 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-120.30102 -18.92173,-69.60117 -18.77884,-75.99059 4.98843,-77.78169 8.18104,-78.78933 9.15225,-79.38518 9.16729,-81.17254 8.64706,-82.20115 8.78855,-82.72614 9.4026,-83.95477 10.51581,-85.21696 12.74948,-95.25457 17.76884,-103.0616 22.65121,-111.56307 32.44848,-120.53829 32.56446,-120.30102 -18.92173))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Coryphaena hippurus Linnaeus, 1758",
 "Year 1881-2024"
 ]
}

 The dataset includes 631 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025803-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14046544
title: Open-source database of N2O emissions related to SOC-sequestration measures

description: Open-source database of N2O emissions related to SOC-sequestration measures
DOI: 10.71687/00040930
title: KMD Aktiv (2001-2005)

description: Et sagsstyringssystem inden for kontanthjælps- og aktiveringsområdet, med funktioner til at beregne og udbetale kontanthjælp og andre forsørgelsesydelser.
DOI: 10.15468/dl.cnmt7q
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coleodactylus meridionalis (Boulenger, 1888)"
 ]
}

 The dataset includes 166 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025804-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/1a723aee-a309-43a3-8d62-1cb68be6cff6
title: Data and scripts underlying the manuscript: Quantifying landfill emission potential using a weakly coupled particle filter

description: Repository for manuscript: Quantifying landfill emission potential using a weaklycoupled particle filter. It includes the input and measurement data (rainfall, EV, outflow, concentration), the model scripts in folder landfillmodules, the data assimilation scripts in folder BB11Z_noexchange. To use the script, you need to run the code following the description in the manuscript (We use a_* to generate synthetic truth, b_* to generate initial particles, c_* to evaluate the ensemble generation performance, d_* to run DA, e_male_plots to generate some plots. Scripts with s in the name use small initial bulk storage). The current zip file already includes all the generated model output files. You can find them in subfolders like plots and process_data. In the subfolder results_2TTc, there are the optimization results from DREAM. We call them in the script a_ to create synthetic truth.