cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/rwdyzx5nb2
title: Robots, tasks, and trade - replication package

description: Detailed replication package for the paper "Robots, tasks, and trade", accepted for publication at the Journal of International Economics.
DOI: 10.6084/m9.figshare.12229160.v1
title: Figure 4, Extended Figure 1 - Flow Cytometry Raw Data

description: Raw Flow Data related to <br><br> Figure 4. Parasite growth and commitment in presence of an inhibitor of hAgo2. Pf2004 parasites were treated with the Ago2 inhibitor BCI-137 at various concentrations or vehicle (DMSO) and assessed for asexual parasitemia and gametocytemia by flow cytometry. A) Parasite multiplication rate (PMR) over two cycles of asexual replication. B) Gametocyte conversion rate under non-induced and gametocyte-induced conditions. Shown is the mean ± SD of n = 2, with 3 technical replicates each.<br>and<br><br>Extended Figure 2. Parasite growth and commitment in presence of an inhibitor of hAgo2. Pf2004 parasites were treated with the Ago2 inhibitor BCI-137 at various concentrations or vehicle (DMSO) and assessed for asexual parasitemia and gametocytemia by flow cytometry. (A) Parasite multiplication rate (PMR) over two cycles of asexual replication. (B) Gametocyte conversion rate under non-induced and gametocyte-induced conditions. 1 % DMSO is the vehicle control corresponding to 100 μM BCI-137, 0.1 % DMSO 1000 is the vehicle control corresponding to 10 μM BCI-137. Shown is the mean ± SD of n = 2, with 3 technical replicates each.
DOI: 10.6084/m9.figshare.25037624.v3
title: Supplementary Data: Renewable H2 Production Economics - Influence of Electrolyser Performance

description: The database includes data collected and results generated from the "Renewable Hydrogen Production Economics - Influence of Electrolyser Performance" analysis by Last et al. in Oxford University Press 2024.The dataset includes:Excel sheet-based tools that were used to generate the results (LCOH forecasts).JPEGs of the figures in the publication.Word document summarizing techno-economic assumptions.Excel sheet summarizing the electrolyzer performance data collected from the literature.
DOI: 10.6084/m9.figshare.7146995.v1
title: Dataset Dairy Heat Stress Gunn et al. 2018 PLOS ONE part 2

description: This dataset includes raw downscaled climate projections (1950-2100) for multiple locations across the U.S. with estimations of temperature humidity index, heat stress frequency, dry matter intake and milk production loss with or without heat abatement. This is the second set of data
DOI: 10.17632/fkw4rt42f2
title: Biological control of Hypothenemus hampei by Crematogaster quadriformis

description: Ants use environmental volatiles to organize themselves as a society and to forage, and they are attracted by the odors of food. Some species of ants have been reported acting as natural enemies of the coffee borer Hypothenemus hampei (Ferrari) (Coleoptera: Curculionidae), an important pest for coffee growing worldwide. In coffee trees, in addition to predatory ants, it is possible to find lacewings, such as Chrysoperla externa (Hagen) (Neuroptera: Chrysopidae), that act on the coffee leaf miner Leucoptera coffeella (Guérin-Mèneville & Perrottet) (Lepidoptera: Lyonetiidae). As ants of genus Crematogaster have already been recorded preying on the coffee borer, the objective of this work was to evaluate the role of Crematogaster quadriformis Roger (Hymenoptera: Formicidae) on Hypothenemus hampei and its interference with the natural enemy Chrysoperla externa, in addition to evaluate the ant’s attractiveness to fruits at different stages of maturation, infested and not infested by the coffee berry borer. The attack of ants on individuals of the coffee borer and lacewings, and their attraction to coffee fruit volatiles, were investigated in controlled conditions. Crematogaster quadriformis showed potential as natural enemy against the coffee borer berry, but also caused intraguild predation, indicating it could interfere with the lacewing’s role as a natural enemy. The ants were attracted to ripe coffee berries, but were unable to distinguish infested from non-infested berries.
DOI: 10.17632/r2vv8pfnwv
title: Data for: The Effectiveness of Patient Activation Intervention on Type 2 Diabetes Mellitus Glycemic Control and Self-Management Behaviors. Systematic Review of RCTs

description: Search Strategy
DOI: 10.25452/figshare.plus.25126898.v1
title: Normal Bone Marrow H&E Images

description: H&E images of normal bone marrow, imaged on the PhenoCycler Fusion after CODEX imaging. 11 of 12 samples included (H36 could not be imaged for H&E). See related materials in Collection at: https://doi.org/10.25452/figshare.plus.c.7174914
DOI: 10.6084/m9.figshare.29109206.v1
title: Raw data for Wu et al. Canopy opening effects on soil biota

description: Raw data for Wu et al. 2025, canopy opening effects on soil fauna community
DOI: 10.6084/m9.figshare.3558087.v1
title: Appendix B. Water and sediment bacterial production and DOC, TDN, and TDP in the field in the treated and untreated lake basins from November 2010 until December 2011.

description: Water and sediment bacterial production and DOC, TDN, and TDP in the field in the treated and untreated lake basins from November 2010 until December 2011.
DOI: 10.6084/m9.figshare.5596750.v1
title: Lipophilicity Dataset - logD7.4 of 1,130 Compounds

description: This repository archives a high-quality hand-curated lipophilicity dataset that includes the chemical structure (SMILES) of 1,130 organic compounds and their n-octanol/buffer solution distribution coefficients at pH 7.4 (logD7.4).<br><br>As a determinant of several ADME properties, lipophilicity (logD7.4) is a key physical property in the development of small molecule oral drugs. This dataset can be applied for method benchmarking in regression modeling, cheminformatics, and chemometrics research.<br><br>If you find this dataset useful in your research, please cite our paper:<br>Wang, J-B., D-S. Cao, M-F. Zhu, Y-H. Yun, N. Xiao, Y-Z. Liang (2015). <i>In silico</i> evaluation of logD7.4 and comparison with other prediction methods. <i>Journal of Chemometrics</i>, 29(7), 389-398.
DOI: 10.6084/m9.figshare.6982991.v1
title: Study data.xlsx

description: A top-down approach was adopted for the identification, measurement, and valuation of the direct costs of CKD and ESKD, based on administrative data obtained from the SIA/SUS and SIH/SUS. These systems serve as a registry of all procedures reimbursed by the Brazilian Ministry of Health to health facilities (hospitals, clinics, and laboratories), public or private, that provide services to the Unified Health System. Direct costs were defined as those of outpatient (SIA/SUS) and inpatient (SIH/SUS) procedures, such as doctor’s appointments, laboratory tests, medications, hospital admissions, treatment of complications, renal replacement therapy, and renal transplantation. Non-medical direct costs (patient transport, caregiver payment), indirect costs (absenteeism, presenteeism, and early death), and intangible costs (loss of ability to work, loss of quality of life, among others) were disregarded. For analysis, direct costs were stratified by variable (sex, race/skin color, and age) and combined with International Classification of Diseases (ICD-10) codes for CKD (N18, N18.8, N18.9) and ESKD (N18.0). The variables sex, race/skin color, and age were divided into the following categories: a) sex – female and male; b) age – 18 to 29 years, 30 to 59 years, 60 to 64 years, 65 to 74 years, and &gt;75 years; c) race/skin color – yellow (Asian), white, red (Native Brazilian), mix-race (<i>pardo</i>), black, and not reported. Specifically for the race/skin color variable, data reallocation was required, as 24% of database entries belonged to the “not reported” category. Data reallocation was performed by calculating the percent share of the categories “yellow”, “white”, “red”, “mix-race”, “black” in relation to total cost, disregarding costs for the “not reported” category; then, costs for the “not reported” category were redistributed based on the percent share calculated in the previous step. Nominal values ​​for the 2010-2016 period were used, without any adjustment for inflation.
DOI: 10.6084/m9.figshare.14269706.v2
title: Supplementary information - Tosi et al. 2021

description: Survival and behavioural data. R script and time-cumulative related data. Original manuscript: Tosi S, Nieh JC, Brandt A, Colli M, Fourrier J, Giffard H, Hernández-López J, Malagnini V, Williams G, Simon-Delso N (2021) Long-term field-realistic exposure to a next-generation pesticide, flupyradifurone, impairs honey bee behaviour and survival. Communications Biology. 4, 805. https://doi.org/10.1038/s42003-021-02336-2
DOI: 10.6084/m9.figshare.17021870.v1
title: Supplementary Material for: Association between Physical Activity, Sedentary Behaviors, Sleep, Diet, and Adiposity among Children and Adolescents in China

description: <b><i>Introduction:</i></b> Physical activity (PA), sedentary behaviors (SB), sleep, and diet are related to adiposity among children and adolescents. However, there may be interactions between PA, SB, sleep, and diet, and these lifestyle behaviors may work together to affect body weight. The purpose of this study was to explore the impact of multiple lifestyle behaviors of PA, SB, sleep, and diet on childhood adiposity (body mass index <i>z</i>-score and overweight/obesity), and to investigate the effect of meeting multiple guidelines on adiposity among children and adolescents in China. <b><i>Methods:</i></b> Cross-sectional results were based on 28,048 children aged 6–17 years from the China National Nutrition and Health Surveillance in 2010–2012. Information about PA, SB, and sleep was measured through interview-administered questionnaire. Dietary intake was assessed with food frequency questionnaire. The associations between multiple lifestyle behaviors and BMI <i>z</i>-score and overweight/obese were examined. <b><i>Results:</i></b> The prevalence of overweight/obesity in the participants was 19.2%. The average time of moderate-to-vigorous PA (MVPA), leisure SB, and sleep was 76.7 ± 45.5 min, 2.9 ± 1.4 h, and 8.5 ± 1.1 h per day, respectively. The China Dietary Guidelines Index for Youth (CDGI-Y) score was 62.6 ± 11.0. Sleep duration and diet score were negative associated with BMI <i>z</i>-score (both <i>p</i> &lt; 0.001). MVPA and SB time were positive associated with BMI <i>z</i>-score (<i>p</i> = 0.041, 0.004). Meeting the SB, sleep, and diet guidelines had a lower BMI <i>z</i>-score (all <i>p</i> &lt; 0.01) and lower odds of overweight/obesity (all <i>p</i> &lt; 0.05). There were significant interactions between PA and diet. Compared with meeting no guidelines, those who met multiple guidelines had a lower risk of overweight/obesity (all <i>p</i> &lt; 0.01). The more guidelines the participants met, the lower odds of overweight/obesity (<i>p</i> for trend &lt;0.001). <b><i>Conclusions:</i></b> PA, SB, sleep, and diet are important behaviors associated with adiposity among children and adolescents. Attaining adequate amounts of appropriate multiple behaviors provided an additional benefit. It is important for children to meet recommended behavioral guidelines or recommendations. Interventions that aim to improve awareness of and compliance with these guidelines are needed in future.
DOI: 10.6084/m9.figshare.19136168.v1
title: Organic vegetable production adoption data.dta

description: The data set for this study include two outcome variables (organic vegetable production (OVP) adoption and organic share of the total cropland (extent of OVP adoption) and independent variables used to explain the likelihood and extent of OVP adoption. The independent variables comprise farmer characteristics (e.g., sex, age, educ, economic status off-farm work, household size, and location), farm-specific factors (e.g., land ownership, land size, time of cultivation), and institutional factors (e.g., cooperative membership and extension).<br>
DOI: 10.6084/m9.figshare.23999010.v1
title: Molecular Dynamics

description: <b>Example input and output files: </b>Density functional theory-based molecular dynamics simulations using VASP (located in the directory labeled "1_Two_phase_simulations"); Gibbs energy calculations using i-PI interfaced with both VASP and LAMMPS (located in the directory labeled "2_Thermodynamic_integration").<b>Code availability: </b>Density functional theory calculations were performed using VASP which is proprietary software available for purchase (at https://www.vasp.at). Classical molecular dynamics simulations were performed with LAMMPS (https://www.lammps.org). Thermodynamic integration was performed using i-PI (https://ipi-code.org) interfaced with both VASP and LAMMPS.
DOI: 10.6084/m9.figshare.28924754.v2
title: Glitch in the Care System

description: This zine explores how the NHS App, as a tool of digital transformation, amplifies existing societal inequalities by disadvantaging not only those who lack access to digital tools, but also those who prefer face-to-face interactions with healthcare providers. It examines how digital exclusion - a recognised social determinant of health - is exacerbated by policies that assume digital-first solutions are universally desirable and accessible.
DOI: 10.17632/49g8777kmz
title: The oncomicropeptide APPLE promotes hematopoietic malignancy by enhancing translation initiation. Sun et al

description: Initiation is the rate-limiting step in translation, and its dysregulation is vital for carcinogenesis including hematopoietic malignancy. Thus, discovery of novel translation initiation regulators may provide promising therapeutic targets. Here, combining Ribo-seq, mass spectrometry and RNA-seq datasets, we discovered an oncomicropeptide, APPLE (a peptide located in ER), encoded by a noncoding RNA transcript in acute myeloid leukemia (AML). APPLE is overexpressed in various subtypes of AML and predicts a poor prognosis. The micropeptide is enriched in ribosomes and regulates the initiation step to enhance translation and to maintain high rates of oncoprotein synthesis. Mechanically, APPLE promotes PABPC1-eIF4G interaction, facilitates mRNA circularization and eIF4F initiation complex assembly to support a specific pro-cancer translation program. Targeting APPLE exhibited broad anti-cancer effects in vitro and in vivo. The study not only reports a previously unknown function of micropeptides, but also provides new opportunities for targeting the translation machinery in cancer cells.
DOI: 10.17632/svmj7s95bs
title: Amplified dosage of the NKX2-1 lineage transcription factor controls its oncogenic role in lung adenocarcinoma

description: Amplification-mediated oncogene overexpression is a critical and widespread driver event in cancer, yet our understanding of how amplification and dosage mediate oncogene regulation is limited. Here, we find that the most significant focal amplification event in lung adenocarcinoma (LUAD) targets a lineage “super-enhancer” near the NKX2-1 lineage transcription factor. The NKX2-1 super-enhancer is targeted by focal and co-amplification with NKX2-1 and controls NKX2-1 expression and regulation. We find that NKX2-1 directly controls enhancer accessibility to drive a lineage-addicted state in LUAD. We precisely map the effects of NKX2-1 dosage modulation upon both overexpression and knockdown and identify both linear and non-linear regulation by NKX2-1 dosage. We find that NKX2-1 is a widespread dependency in LUAD cell lines and that NKX2-1 confers persistence to EGFR inhibitors. Our data suggest a defining role for dosage in the oncogenic regulation of amplified NKX2-1 and that amplified NKX2-1 lineage addiction defines LUAD tumors.
DOI: 10.6084/m9.figshare.28755155.v1
title: Fofie, Granja-Vazquez, Truong, Walsh, Price, Biswas, Dussor, Pancrazio, Kolber. (2025) Profiling Human iPSC-Derived Sensory Neurons for Analgesic Drug Screening Using a Multi-Electrode Array. <i>Cell Reports Methods </i>2025 Raw data.xlsx

description: These raw data are from a published manuscript - Fofie, Granja-Vazquez, Truong, Walsh, Price, Biswas, Dussor, Pancrazio, Kolber. (2025) Profiling Human iPSC-Derived Sensory Neurons for Analgesic Drug Screening Using a Multi-Electrode Array. <i>Cell Reports Methods</i><b>Fofie et al.</b> present a high-content screening platform using hiPSC-derived nociceptors cultured on multi-well multi-electrode arrays to identify peripheral analgesics with diverse mechanisms of action. This scalable system shows robust activity, pharmacological relevance, and transcriptomic validation, enabling the discovery of 39 potential hits from a 704-compound natural product library.
DOI: 10.6084/m9.figshare.801094.v1
title: Thesis data

description: This is a collection of the data associated with my PhD thesis
DOI: 10.17632/fnvwk9637p
title: Dataset for Smart Irrigation Systems in Agriculture: A systematic review

description: This is the dataset used for the systematic review article Smart Irrigation Systems in Agriculture.
DOI: 10.6084/m9.figshare.12757961.v1
title: SCARS Sensor Experimental Data

description: SCARS sensor experimental data.
DOI: 10.6084/m9.figshare.19312412.v1
title: Data Clean.xlsx

description: This data used for research that concern about Immunization and health of children in West Java Province, Indonesia. The data collection process was carried out from August 1 to August 31, 2021, with the target sample including parents who have children under the age of 5 years.
DOI: 10.6084/m9.figshare.21315771.v1
title: data

description: stress strain curves
DOI: 10.6084/m9.figshare.26425630.v1
title: converting timsTOF-pro

description: just adding the [timsconvert](https://github.com/gtluu/timsconvert) to the [tdf2mzml](https://github.com/mafreitas/tdf2mzml) mix, tried converting https://bioshare.bioinformatics.ucdavis.edu/bioshare/download/cts8a50sb36put8/26june24_hel200_100spd_OT_1ulirt_S2-H2_1_6370.d.zip using both converted files https://github.com/lazear/sage/issues/123
DOI: 10.6084/m9.figshare.28715378.v1
title: Phlibitis Excel.xls

description: Neonates admitted to hospitals need vascular access for various purposes, such as fluid or drug administration, blood transfusion, and diagnostic procedures. Insertion of the peripheral intravascular line is essential to the existence of neonates in the neonatal intensive care unit (NICU) and it is one of the most regular invasive procedures
DOI: 10.6084/m9.figshare.28890035.v1
title: Bridging Species Richness and True Diversity: A Quantitative and Ratio Analysis Approach from Indian Biodiversity Studies

description: The dataset is used in proposed new metrics linking species richness (N​0) and true diversity, calculated as the first-order Hill Number (N1​). The metrics include Diversity Delta (N0​−N1​), True Diversity-to-Species Richness Ratio (N1​/N0​), and Species Richness-to-True Diversity Multiple (N0​/N1​). The dataset is based on ecological work done in India over last 25 years.
DOI: 10.17632/7s3vxhzm8y
title: Dataset for the manuscript Analysis of adaptive individual pitch control schemes for blade fatigue load reduction on a 15 MW wind turbine

description: This dataset contains data and plots presented in the paper "Analysis of adaptive individual pitch control schemes for blade fatigue load reduction on a 15 MW wind turbine".
The dataset encompasses a wide variety of data types, including but not limited to:
- Numerical data: Post-processed simulation data and calculations.
- Visual data: plots illustrating findings.

These data are provided in two folders. The description of these folder and their files is as follows:

A) The folder "OptimizationResults" includes:
- the dataset ajustes.mat with the parameter obtained by optimization for the different schemes and data of table 3 in the manuscript.
- the file figparameters to treat these data to generate the figure 6 in the paper
- The file Figure6.fig with this figure in MATLAB format.

B) The folders "SimulationResults" includes:
- Twenty "mat" files with the raw simulation data obtained with each control scheme for each simulation case. For example, the file "16_Azi_2KP_diferentes_3Param_MyAdapt40s" contains the simulation data of the scheme IPC_I2phi, that is, the IPC scheme with two integral controllers with different gains and with azimuth offset when the case 1 with the mean wind speed varies around 16 m/s.
- Files simulationcase1_16.m, simulationcase2_18.m, and simulationcase3_20.m, which are used to treat and generate the data and figures for the corresponding simulation case. Some of these figures are not included in the manuscript. In each file, first, the raw data are treated, then the figures related with the time and frequency responses are generated, and finally, the performance indices are computed.
- tratarDatos.m: function: is used to treat and format the simulation raw data
- createFigures.m function: is used to create the figure with time responses of variables in the rotating frame (first figure such Figure 7 in the manuscript) and the nonrotating frame (second figure, as Figure 8 in the manuscript)
- createfiguresFrec.m function: is used to create the figure with the frequency response as in Figure 9 in the manuscript
- calculoIndices.m function: is used to calculate the performance indices of the proposed control schemes
- Figure files in the MATLAB format .fig for Figures 7, 8, and 9 in the manuscript.
DOI: 10.17632/d7n5mvb2sg
title: Data from structural testing of sprayed and cast shotcrete reinforced with fibres of steel, basalt and synthetic material

description: In this dataset, data from experimental testing of fibre-reinforced shotcrete is presented. The dataset contains results from four different fibres made of steel (Dramix 3D and Dramix 4D), synthetic (BarChip R54) and basalt (MiniBar). Preparation of specimens and testing were performed by Vattenfall R&D in Älvkarleby, Sweden. This second version of the dataset contains the results for shotcrete specimens prepared through casting and spraying. The same shotcrete mix was used for all specimens, and three different dosages were used for each of the fibres. The dataset contains the shotcrete mix and standard output for the test of compressive strength according to EN 12390-3, residual flexural strength according to EN 14488-3 and energy absorption according to ASTM C1550. Raw data, i.e. force-displacement curves from testing, are also available. 

This dataset can be used to study how the structural performance of fibre-reinforced shotcrete is affected by the dosage of fibre. Moreover, the data can be used to verify and tune non-linear material models using the finite element method. The data also provide a foundation to select a reasonable dosage of fibres to fulfil the structural requirements put on shotcrete in the design phase.

A data paper entitled "Dataset for evaluation and numerical modelling of structural performance of fibre-reinforced shotcrete with fibres of steel, synthetic and basalt" is currently under review in Data in Brief and, if accepted, a link to the paper will be added here for a more thorough description.
DOI: 10.6084/m9.figshare.12084183.v1
title: Hydrogen bond basicity data: text file with measured pKBHX values, isomeric SMILES strings and literature references

description: Text file with 454 measured values of pK<sub>BHX </sub>(see J Med Chem 2009 52:4073-4086) that was published as supplementary information for JCAMD 2017 31:163-181. This supersedes the corresponding file that was published as supplementary information for J Med Chem 2016 59:4728-4288. Column headings are as follows: <br>#SMILES: Isomeric SMILES stringID: Internal referencepKBHX Measured value of pK<sub>BHX</sub>Name: Molecular structure nameRef : CitationRef.URL: Citation URL
DOI: 10.6084/m9.figshare.12327602.v3
title: genome fasta sequence and annotation files

description: cultivated alfalfa genome sequence, CDS sequence, protein sequence and gff files.