cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0195822.10fu
title: SH0195822.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0195823.10fu
title: SH0195823.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.34770/2ye8-px32
title: Alternative energy vehicle deployment coupled with decarbonizing electricity generation amplifies climate, air quality and health co-benefits in China

description: China is the world's largest carbon emitter and suffers from severe
 air pollution. About one million deaths in China were attributable to air
 pollution in 2017. Alternative energy vehicles (AEVs), e.g. electric,
 hydrogen fuel cell, and natural gas vehicles, can help achieve both carbon
 emission mitigation and air quality improvement. However, climate, air
 quality and health co-benefit of AEVs powered by deeply decarbonized
 electricity generation remain poorly quantified. Here, we conduct a
 quantitative integrated assessment of the air quality, health, carbon
 emission mitigation and economic benefits of AEV deployment as the
 electricity grid decarbonizes in China. We find population-weighted annual
 PM2.5 and summer O3 concentration can decrease as large as 5.7μgm−3 and
 4.9ppb. Annual avoided premature mortalities and years of life lost
 resulting from improved ambient air pollution can be as large as ~329,000
 persons and ~1,611,000 years. We thus show that maximizing climate, air
 quality and health benefits of AEV deployment in China requires rapid
 decarbonization of the power system.
DOI: 10.15468/dl.ke769a
title: Occurrence Download

description: A dataset containing 7253473 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Korea, Republic of"
 ]
}

 The dataset includes 7253473 records from 1338 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022132-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48597/nnfc-mhb7
title: Measurement of Meteorology at Värriö

description: Measurement of Meteorology at Värriö
DOI: 10.5281/zenodo.14134716
title: Crustal heterogeneity onshore central Spitsbergen: insights from new gravity and vintage geophysical data (digital appendix)

description: This is a digital appendix with data sets related to a scientific paper in G-cubed. It contains gravity, GPR and positioning data from Svalbard.

 

Crustal heterogeneity onshore central Spitsbergen: insights from new gravity and vintage geophysical data 

Kim Senger1,2*, Fenna Ammerlaan1,3, Peter Betlem1, †, Marco Brönner4, Marie-Andrée Dumais4, Jomar Gellein4, Tormod Henningsen5, Julian Janocha1,6, Erik P. Johannessen7, Jonas Liebsch1,8, Jakob Machleidt9,1, Tereza Mosočiová1,10,11, Snorre Olaussen1, Bo Olofsson12, Nil Rodes1, Sofia Rylander12,1,  Grace E. Shephard13,14, Aleksandra Smyrak-Sikora15, Juan D. Solano-Acosta16,1 and Anna Sterley11,1
DOI: 10.5281/zenodo.14134717
title: Crustal heterogeneity onshore central Spitsbergen: insights from new gravity and vintage geophysical data (digital appendix)

description: This is a digital appendix with data sets related to a scientific paper in G-cubed. It contains gravity, GPR and positioning data from Svalbard.

 

Crustal heterogeneity onshore central Spitsbergen: insights from new gravity and vintage geophysical data 

Kim Senger1,2*, Fenna Ammerlaan1,3, Peter Betlem1, †, Marco Brönner4, Marie-Andrée Dumais4, Jomar Gellein4, Tormod Henningsen5, Julian Janocha1,6, Erik P. Johannessen7, Jonas Liebsch1,8, Jakob Machleidt9,1, Tereza Mosočiová1,10,11, Snorre Olaussen1, Bo Olofsson12, Nil Rodes1, Sofia Rylander12,1,  Grace E. Shephard13,14, Aleksandra Smyrak-Sikora15, Juan D. Solano-Acosta16,1 and Anna Sterley11,1
DOI: 10.5281/zenodo.14186332
title: Simulation and laboratory eddy current testing data - modelling compound defects via perturbation theory

description: This dataset serves to fit and validate a perturbation approach to the modelling eddy current signals of compound defects. It was obtained during the AIFRI project (Artificial Intelligence for Rail Inspection). The simulation data was generated with the Faraday software by INTEGRATED Engineering Software, using its BEM Solver. The simulation data is supplied as csv. The laboratory data was gathered by Rainer Pohl in the eddy current laboratory of BAM, section 8.4. It is supplied in the DICONDE data format. The first frame of the pixel array in the DICONDE files corresponds to the real part and the second frame corresponds to the imaginary part of the signal. The data set is analyzed in an upcoming article.
DOI: 10.5281/zenodo.14186333
title: Simulation and laboratory eddy current testing data - modelling compound defects via perturbation theory

description: This dataset serves to fit and validate a perturbation approach to the modelling eddy current signals of compound defects. It was obtained during the AIFRI project (Artificial Intelligence for Rail Inspection). The simulation data was generated with the Faraday software by INTEGRATED Engineering Software, using its BEM Solver. The simulation data is supplied as csv. The laboratory data was gathered by Rainer Pohl in the eddy current laboratory of BAM, section 8.4. It is supplied in the DICONDE data format. The first frame of the pixel array in the DICONDE files corresponds to the real part and the second frame corresponds to the imaginary part of the signal. The data set is analyzed in an upcoming article.
DOI: 10.6073/pasta/339bdd97dee802057928f7016a6128e8
title: Soil moisture along an elevation gradient at the Hubbard Brook Experimental Forest, 2010 - ongoing

description: Soil temperature and soil moisture have been measured at multiple locations at the Hubbard Brook Experimental Forest (HBEF), as part of a study of the relationships between snow depth, soil freezing and nutrient cycling (http://www.ecostudies.org/people_sci_groffman_snow_summary.html). In October 2010, we established 6, 20 x 20-m plots (intensive plots) and 14 10 x 10-m plots (extensive plots) along an elevation gradient, with eight of the plots on north-facing slopes and twelve on south-facing slopes. Soil temperature and soil moisture were measured at hourly intervals on these plots beginning in November 2010. Six locations were discontinued in September 2012 (E04, E05, E06, E11-B, E13, and E14).
 Previous versions of this dataset included both temperature and moisture. These data are now available as moisture(this dataset) and temperature (https://portal.edirepository.org/nis/mapbrowse?scope=knb-lter-hbr&identifier=315].
 These data were gathered as part of the Hubbard Brook Ecosystem Study (HBES). The HBES is a collaborative effort at the Hubbard Brook Experimental Forest, which is operated and maintained by the USDA Forest Service, Northern Research Station.
DOI: 10.15468/dl.7zvkv9
title: Occurrence Download

description: A dataset containing 1926 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Eugenia uniflora L."
 ]
}

 The dataset includes 1926 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022136-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/0jqsjt
title: Cd06Zn94Te_16h19mn10s.spe

description: Experimental data of Cd(1−x)Zn(x)Te alloy with x = 0.94
DOI: 10.57745/8urgsw
title: CdTe_10h40mn21s.spe

description: Experimental data of Cd(1−x)Zn(x)Te alloy with x = 0
DOI: 10.57745/edkmoo
title: Cd47Zn53Te_11h53mn39s.spe

description: Experimental data of Cd(1−x)Zn(x)Te alloy with x = 0.53
DOI: 10.57745/hlnvci
title: Cd93Zn07Te_17h59mn17s.spe

description: Experimental data of Cd(1−x)Zn(x)Te alloy with x = 0.07
DOI: 10.57745/koqrzc
title: Cd89Zn11Te_16h30mn11s.spe

description: Experimental data of Cd(1−x)Zn(x)Te alloy with x = 0.11
DOI: 10.57745/macbhj
title: Cd09Zn91Te_17h34mn46s.spe

description: Experimental data of Cd(1−x)Zn(x)Te alloy with x = 0.91
DOI: 10.57745/mayrx4
title: Cd13Zn87Te_08h45mn40s.spe

description: Experimental data of Cd(1−x)Zn(x)Te alloy with x = 0.87
DOI: 10.57745/ponzgz
title: Cd72Zn28Te_13h40mn46s.spe

description: Experimental data of Cd(1−x)Zn(x)Te alloy with x = 0.28
DOI: 10.57745/1krnew
title: Data_Fig3.txt

description: data of Fig3. of the article « Raman study of Cd1-xZnxTe phonons and phonon–polaritons—Experiment and ab initio calculations » corresponding to optical bandgap Eo(eV) and Eo+Do(eV) values found at room temperature by ellipsometry of the sample Cd(1-x)Zn(x)Te from x=0 to x=1.
DOI: 10.57745/3pttpd
title: ZnTe_14h47mn32s.spe

description: Experimental data of Cd(1−x)Zn(x)Te alloy with x = 1
DOI: 10.57745/d61xek
title: README_EN.txt
DOI: 10.48597/69w4-zfcf
title: Measurement of Meteorology at Värriö

description: Measurement of Meteorology at Värriö
DOI: 10.48574/bb8ed16e-7fb9-414d-80c0-628fc7b1b364
title: Data to: Root System Architecture Reorganization Under Decreasing Soil Phosphorus Lowers Root System Conductance of Zea Mays
DOI: 10.6084/m9.figshare.25664736
title: A Novel Type of Autosomal Dominant Episodic Nystagmus Segregating with a Variant in the FRMD5 Gene

description: To describe the phenotype of a novel form of autosomal dominant episodic nystagmus and to identify the potential genetic aetiology. We identified several individuals in a large Swedish family affected by episodic nystagmus. In total, 39 family members from five generations were invited to participate in the study, of which 17 were included (12 affected and 5 unaffected). The phenotype of the nystagmus was described based on data collected from family members through questionnaires, interviews, clinical examinations and from video recordings of ongoing episodes of nystagmus. Whole genome sequencing (WGS) and further Sanger sequencing for segregation of the identified candidate variants was performed in eight participants (six affected and two unaffected). The 12 affected participants showed a phenotype with episodic nystagmus of early onset. A vertical jerk nystagmus with variable amplitude and frequency was characterized in the analysed video material. No other eye pathology or other disease that could explain the episodic nystagmus was identified among the family participants. Genetic analysis identified a missense variant (p.Ser375Phe) in the gene FRMD5, which segregated with the disease in the eight individuals analysed, from three generations. We describe a novel autosomal dominant form of early onset episodic nystagmus and suggest the FRMD5 gene as a strong candidate gene for this disorder.
DOI: 10.6084/m9.figshare.25664736.v1
title: A Novel Type of Autosomal Dominant Episodic Nystagmus Segregating with a Variant in the FRMD5 Gene

description: To describe the phenotype of a novel form of autosomal dominant episodic nystagmus and to identify the potential genetic aetiology. We identified several individuals in a large Swedish family affected by episodic nystagmus. In total, 39 family members from five generations were invited to participate in the study, of which 17 were included (12 affected and 5 unaffected). The phenotype of the nystagmus was described based on data collected from family members through questionnaires, interviews, clinical examinations and from video recordings of ongoing episodes of nystagmus. Whole genome sequencing (WGS) and further Sanger sequencing for segregation of the identified candidate variants was performed in eight participants (six affected and two unaffected). The 12 affected participants showed a phenotype with episodic nystagmus of early onset. A vertical jerk nystagmus with variable amplitude and frequency was characterized in the analysed video material. No other eye pathology or other disease that could explain the episodic nystagmus was identified among the family participants. Genetic analysis identified a missense variant (p.Ser375Phe) in the gene FRMD5, which segregated with the disease in the eight individuals analysed, from three generations. We describe a novel autosomal dominant form of early onset episodic nystagmus and suggest the FRMD5 gene as a strong candidate gene for this disorder.
DOI: 10.6084/m9.figshare.25976254
title: Ellipsoid Zone Reflectivity: Exploring its Potential as a Novel Non-Invasive Biomarker for Assessing Mitochondrial Function

description: The ellipsoid zone (EZ) on macular optical coherence tomography (OCT) scans exhibits high intensity due to a high density of light-scattering mitochondria, making its reflectivity a potential marker for mitochondrial function. Here, we developed a reliable analysis tool for extracting relative EZ reflectivity and explore its potential as a biomarker in various diseases. We analysed OCT scans of patients with optic neuritis (ON), primary progressive optic neuropathy (PPON), chronic progressive external ophthalmoplegia (CPEO), dominant optic atrophy (DOA), and healthy controls. EZ reflectivity (normalised to the retina pigment epithelium (RPE) and outer nuclear layer (ONL)) was evaluated. Reliability was assessed using intraclass correlation coefficients (ICC), and group differences were analysed through multivariable linear regression, adjusting for relevant confounders. In total, 12 controls, 23 ON patients, 7 CPEO patients, 13 DOA patients, and 13 PPON patients were included. EZ/RPE20% and EZ/ONL ratios demonstrated good test–retest reliability with ICCs of 0.76 (<i>p</i> &lt; .001) and 0.63 (<i>p</i> = .013), respectively. Multivariable regression analysis revealed that median EZ/RPE20% and EZ/ONL ratios were lower in CPEO (<i>r </i>= -0.12, <i>p</i> = .036, and <i>r</i> = -0.59, <i>p</i> = .011), DOA (<i>r </i>= -0.16, <i>p</i> = .049, and <i>r </i>= -0.55, <i>p</i> = .082), PPON (<i>r </i>= -0.17, <i>p</i> = .014, and <i>r </i>= -0.57, <i>p</i> = .037), and ON (<i>r </i>= -0.11, <i>p</i> = .013, and <i>r </i>= -0.42, <i>p</i> = .006) compared to controls, respectively. These data show that EZ reflectivity can be reliably determined from OCT scans and appears to be reduced in neuroinflammatory and mitochondrial disorders. Further validation in larger prospective cohorts is warranted, but our findings suggest that EZ reflectivity might serve as a non-invasive in-vivo biomarker for mitochondrial health.
DOI: 10.6084/m9.figshare.25976254.v1
title: Ellipsoid Zone Reflectivity: Exploring its Potential as a Novel Non-Invasive Biomarker for Assessing Mitochondrial Function

description: The ellipsoid zone (EZ) on macular optical coherence tomography (OCT) scans exhibits high intensity due to a high density of light-scattering mitochondria, making its reflectivity a potential marker for mitochondrial function. Here, we developed a reliable analysis tool for extracting relative EZ reflectivity and explore its potential as a biomarker in various diseases. We analysed OCT scans of patients with optic neuritis (ON), primary progressive optic neuropathy (PPON), chronic progressive external ophthalmoplegia (CPEO), dominant optic atrophy (DOA), and healthy controls. EZ reflectivity (normalised to the retina pigment epithelium (RPE) and outer nuclear layer (ONL)) was evaluated. Reliability was assessed using intraclass correlation coefficients (ICC), and group differences were analysed through multivariable linear regression, adjusting for relevant confounders. In total, 12 controls, 23 ON patients, 7 CPEO patients, 13 DOA patients, and 13 PPON patients were included. EZ/RPE20% and EZ/ONL ratios demonstrated good test–retest reliability with ICCs of 0.76 (<i>p</i> &lt; .001) and 0.63 (<i>p</i> = .013), respectively. Multivariable regression analysis revealed that median EZ/RPE20% and EZ/ONL ratios were lower in CPEO (<i>r </i>= -0.12, <i>p</i> = .036, and <i>r</i> = -0.59, <i>p</i> = .011), DOA (<i>r </i>= -0.16, <i>p</i> = .049, and <i>r </i>= -0.55, <i>p</i> = .082), PPON (<i>r </i>= -0.17, <i>p</i> = .014, and <i>r </i>= -0.57, <i>p</i> = .037), and ON (<i>r </i>= -0.11, <i>p</i> = .013, and <i>r </i>= -0.42, <i>p</i> = .006) compared to controls, respectively. These data show that EZ reflectivity can be reliably determined from OCT scans and appears to be reduced in neuroinflammatory and mitochondrial disorders. Further validation in larger prospective cohorts is warranted, but our findings suggest that EZ reflectivity might serve as a non-invasive in-vivo biomarker for mitochondrial health.
DOI: 10.6084/m9.figshare.27165741
title: Grid Point Approximation for Distributed Nonparametric Smoothing and Prediction

description: Kernel smoothing is a widely used nonparametric method in modern statistical analysis. The problem of efficiently conducting kernel smoothing for a massive dataset on a distributed system is a problem of great importance. In this work, we find that the popularly used one-shot type estimator is highly inefficient for prediction purposes. To this end, we propose a novel grid point approximation (GPA) method, which has the following advantages. First, the resulting GPA estimator is as statistically efficient as the global estimator under mild conditions. Second, it requires no communication and is extremely efficient in terms of computation for prediction. Third, it is applicable to the case where the data are not randomly distributed across different machines. To select a suitable bandwidth, two novel bandwidth selectors are further developed and theoretically supported. Extensive numerical studies are conducted to corroborate our theoretical findings. Two real data examples are also provided to demonstrate the usefulness of our GPA method. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.27165741.v1
title: Grid Point Approximation for Distributed Nonparametric Smoothing and Prediction

description: Kernel smoothing is a widely used nonparametric method in modern statistical analysis. The problem of efficiently conducting kernel smoothing for a massive dataset on a distributed system is a problem of great importance. In this work, we find that the popularly used one-shot type estimator is highly inefficient for prediction purposes. To this end, we propose a novel grid point approximation (GPA) method, which has the following advantages. First, the resulting GPA estimator is as statistically efficient as the global estimator under mild conditions. Second, it requires no communication and is extremely efficient in terms of computation for prediction. Third, it is applicable to the case where the data are not randomly distributed across different machines. To select a suitable bandwidth, two novel bandwidth selectors are further developed and theoretically supported. Extensive numerical studies are conducted to corroborate our theoretical findings. Two real data examples are also provided to demonstrate the usefulness of our GPA method. Supplementary materials for this article are available online.
DOI: 10.15468/dl.brrehu
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Poland",
 "GadmGid is POL.11_1",
 "TaxonKey is Campylopus introflexus (Hedw.) Brid."
 ]
}

 The dataset includes 82 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022139-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.my8eyc
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eretmobrycon dahli",
 "HasCoordinate is true",
 "BasisOfRecord is Specimen",
 "Country is Colombia"
 ]
}

 The dataset includes 28 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022141-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14187159
title: Data Extraction and Quality Assessment about Cybersecurity in the Context of Agile Software Development
DOI: 10.5281/zenodo.14187160
title: Data Extraction and Quality Assessment about Cybersecurity in the Context of Agile Software Development
DOI: 10.15468/dl.hus67c
title: Occurrence Download

description: A dataset containing 2796 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Mexico",
 "TaxonKey is Echinocactus platyacanthus Link & Otto"
 ]
}

 The dataset includes 2796 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022140-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14187171
title: Dados - GESTÃO DO CONHECIMENTO EM BIBLIOTECAS: Uma busca sistematizada
DOI: 10.5281/zenodo.14187172
title: Dados - GESTÃO DO CONHECIMENTO EM BIBLIOTECAS: Uma busca sistematizada