cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6407296
title: SCOUT Simulated Data 2

description: Simulated Data set 2 for SCOUT. Contains raw data and analysis for the Individual Shift and Non-Rigid 1p datasets.
DOI: 10.5281/zenodo.6407295
title: SCOUT Simulated Data 2

description: Simulated Data set 2 for SCOUT. Contains raw data and analysis for the Individual Shift and Non-Rigid 1p datasets.
DOI: 10.34740/kaggle/dsv/3394411
title: BBC News
DOI: 10.15151/esrf-es-702673650
title: IBS BAG

description: The IBS BAG includes in this proposal IBS teams and external groups from iRTSV/CEA (Grenoble), CEA-Cadarache (St Paul lez Durance) and IRBA (Brétigny-sur-Orge). We study structure-function relationships of proteins emphasizing in human health, biotechnology and methodology. Most of the projects are a continuation of the MX-2329 proposal and can be grouped in different topics as follows: host-pathogen interaction, new drug targets, fundamental cellular mechanisms, membrane proteins, intrinsically disordered proteins, biotechnological applications and methodology. Some of these projects use integrative approaches (X-ray crystallography, SAXS, NMR (and cryo-EM), together with other biophysical studies) with the aim to fully understand the complexity of the biological macromolecular systems on study. Some teams are dedicated to serial crystallography and its developments, for which the ESRF-EBS has become the perfect tool.
DOI: 10.34740/kaggle/dsv/3394384
title: Boston Crime Dataset 2022
DOI: 10.6073/pasta/0d0f798750a10ad7ea4575a72d590c6f
title: Bonanza Creek LTER: Hourly Snow Depth Measurements from 1988 to Present in the Bonanza Creek Experimental Forest near Fairbanks, Alaska

description: Snow depth is measured hourly at both the LTER1 and LTER2 research stations within Bonanza Creek Experimental Forest using a Campbell Scientific data logger and a SR50 sonic snow depth sensor.
DOI: 10.6073/pasta/ed59397236488bb247f8cf38b95c9270
title: Bonanza Creek LTER: Hourly Precipitation Measurements from 1993 to Present in the Caribou-Poker Creeks Research Watershed near Fairbanks, Alaska

description: Precipitation is measured at many sites withinCPCRW using TE525 tipping buckets. These sensors are able to detect .254mm of precipitation and record hourly totals of rainfall or throughfall. It should be noted the tipping buckets within forested sites are subject to clogging by forest debris whcih can result in under reporting of rain events as well as over reporting upon release of the collected precipitation.
DOI: 10.6073/pasta/5e9cafb3ed05fa83a2db245e5eab9f34
title: Bonanza Creek LTER: Hourly Evaporation measurements at Core Sites from 1988 to Present in the Bonanza Creek Experimental Forest near Fairbanks, Alaska

description: This study is a survey of the vegetation of the 35 control sites in Bonanza Creek LTER. The 35 sites represent replicates each of six successional stages of primary succession on the floodplain of the Tanana River and four stages of succession uplandsas well as a few recently burned sites. Data include percent cover of all species and count based on twenty 1 m2 or 4 m2 plots. Plots in young stages of succession were remeasured every 1 to 2 years; those in older stages every 3 to 5 years. Some information on biomass in these stages is available. Although most sites were established in 1988 some sites have vegetation plots that have been sampled periodically since 1965. 2009 was the last year of sampling using visual estimates of percent cover. In 2007 a new point framing system was developed and is now used for collecting vegetation data from these sites.
DOI: 10.34740/kaggle/dsv/3394485
title: Boston Crime Dataset 2022
DOI: 10.6073/pasta/8180b828d8f5244ac1042acb1ca97c97
title: Bonanza Creek LTER: Hourly Snow Pillow Measurements from 1988 to Present in the Bonanza Creek Experimental Forest near Fairbanks, Alaska

description: The snow pillow records the hourly water content of the snowpack (snow water equivalent) at the LTER1 site within the Bonanza Creek Experimental Forest during the winter months.
DOI: 10.5281/zenodo.6407316
title: FastNLO interpolation tables for NLO pQCD predictions of Inclusive Jet Production in $pp$ collisions at $\sqrt{s}=200$ and $510$~GeV

description: This is generated using the NLOJet++ interface using jet pT for renormalization and factorization scale. \sqrt{s} = 200 GeV<br> anti-kT R=0.5 and R=0.6<br> |eta| bins: 0.0 0.5 0.9<br> pT bins (GeV): 6.9 8.2 9.7 11.5 13.6 16.1 19.0 22.5 26.6 31.4 37.2 44.0 52.0 \sqrt{s} = 510 GeV<br> anti-kT R=0.5<br> |eta| bins: 0.0 0.5 0.9<br> pT bins (GeV): 8.0 10.0 13.0 17.0 21.0 26.0 32.0 39.0 47.0 57.0 68.0 80.0
DOI: 10.6073/pasta/6dacb3bb29ae5f3c426221d3ec3c9d44
title: Bonanza Creek LTER: Hourly Barometric Pressure Measurements from 2000 to Present in the Caribou-Poker Creeks Research Watershed near Fairbanks, Alaska

description: A Campbell Scientific data logger and pressure sensor were used to measure barometric pressure at the CRREL meteorological station in the Caribou-Poker Creeks Research Watershed (CPCRW) beginning in 2000.
DOI: 10.25919/02mz-1e56
title: Parkes observations for project PX500 semester 2021OCTS_35

description: This proposal relates to time purchased by the Chinese Academy of Sciences for Parkes follow-up confirmation and timing of FAST discoveries. As the observing time has been purchased this proposal (and the related PX501) does not require TAC grading. The primary reason for submitting a proposal is to ensure an outreach statement and that the proposal is entered into OPAL for the data archive to access. The Chinese team have two time requests. The time scheduled for the first, relating to this proposal, will be allocated in blocks of 24 hours and the data will become available in the data archive with an 18 month embargo period. The second type of time will be scheduled in shorter blocks and the data archived with a 10 year embargo.
DOI: 10.5063/f1542m11
title: Species distributions and the recognition of risk in restoration planning: A case study of salmonid fishes

description: One of the risks faced by habitat restoration practitioners is whether habitats included in restoration planning will be used by the target species or, conversely, whether habitats excluded from restoration planning would have benefitted the target species. With the goal of providing a quantitative decision-making approach that represented varying levels of risk tolerance, we used multiple probability decision thresholds (PDT) to predict the range of occurrence for three anadromous fishes (Oncorhynchus spp.) in a watershed in southwestern Washington, USA. For each species, we compared the predicted range of occurrence to the distribution used for restoration planning and quantified the amount of habitat blocked by anthropogenic barriers. Coho salmon (O. kisutch) had the broadest predicted range of occurrence (3,061.6–6,357.9 km; 0.75–0.25 PDT), followed by steelhead trout (O. mykiss; 1,828.8–2,836.8 km) and chum salmon (O. keta; 1373.9–1,629.1 km). For each species, the predicted range of occurrence was similar or greater than the distribution used for restoration planning, suggesting that the current plan may exclude habitats that would benefit each species. Coho salmon had the greatest percentage of habitat blocked by anthropogenic barriers, followed by steelhead trout and chum salmon, respectively. Modelling species distributions at multiple risk tolerance scenarios acknowledges uncertainty in restoration planning and allows practitioners to weigh the ecological benefits and budgetary constraints when considering locations for restoration. To effectively communicate restoration science to support practitioners in decision making, we developed a R Shiny application online user interface available at: https://shiny.wdfw-fish.us/ChehalisRiverBasinSalmonidRangeOfOccurence/.
DOI: 10.5281/zenodo.4562782
title: Benchmarking computational doublet-detection methods for single-cell RNA sequencing data

description: This repository contains the real and synthetic datasets used in the paper "Benchmarking Computational Doublet-Detection Methods for Single-Cell RNA Sequencing Data" and "Protocol for Benchmarking Computational Doublet-Detection Methods in Single-Cell RNA Sequencing Data Analysis". Please check the full text published on Cell Systems and STAR Protocols. 1. real_datasets.zip: 16 real scRNA-seq datasets with experimentally annotated doublets. This collection covers a variety of cell types, droplet and gene numbers, doublet rates, and sequencing depths. It represents varying levels of difficulty in detecting doublets from scRNA-seq data. The data collection and preprocessing details are described in our Cell System paper. The name of each file corresponds to the names in the paper. 2. synthetic_datasets.zip: synthetic datasets used in the paper, including datasets with varying doublet rates (i.e., percentages of doublets among all droplets), sequencing depths, cell types, and between-cell-type heterogeneity levels. The synthetic datasets contain ground-truth doublets, cell types, differentially expressed (DE) genes, and cell trajectories. The simulation details are described in our Cell System paper. 3. A detailed description on how to use these datasets is available at our STAR Protocols paper
description: {"references": ["Xi, N. M. and Li, J. J. (2020) 'Benchmarking Computational Doublet-Detection Methods for Single-Cell RNA Sequencing Data', Cell systems. doi: 10.1016/j.cels.2020.11.008."]}
DOI: 10.5281/zenodo.4062231
title: Benchmarking computational doublet-detection methods for single-cell RNA sequencing data

description: This repository contains the real and synthetic datasets used in the paper "Benchmarking Computational Doublet-Detection Methods for Single-Cell RNA Sequencing Data" and "Protocol for Benchmarking Computational Doublet-Detection Methods in Single-Cell RNA Sequencing Data Analysis". Please check the full text published on Cell Systems and STAR Protocols. 1. real_datasets.zip: 16 real scRNA-seq datasets with experimentally annotated doublets. This collection covers a variety of cell types, droplet and gene numbers, doublet rates, and sequencing depths. It represents varying levels of difficulty in detecting doublets from scRNA-seq data. The data collection and preprocessing details are described in our Cell System paper. The name of each file corresponds to the names in the paper. 2. synthetic_datasets.zip: synthetic datasets used in the paper, including datasets with varying doublet rates (i.e., percentages of doublets among all droplets), sequencing depths, cell types, and between-cell-type heterogeneity levels. The synthetic datasets contain ground-truth doublets, cell types, differentially expressed (DE) genes, and cell trajectories. The simulation details are described in our Cell System paper. 3. A detailed description on how to use these datasets is available at our STAR Protocols paper
description: {"references": ["Xi, N. M. and Li, J. J. (2020) 'Benchmarking Computational Doublet-Detection Methods for Single-Cell RNA Sequencing Data', Cell systems. doi: 10.1016/j.cels.2020.11.008."]}
DOI: 10.34740/kaggle/dsv/3394526
title: Russian Invasion of Ukraine
DOI: 10.6073/pasta/406be80559ec561fa6b462e98af6c612
title: Bonanza Creek LTER: Hourly Dew Point Measurements from 1988 to Present in the Bonanza Creek Experimental Forest near Fairbanks, Alaska

description: Dew point values are calculated using the data from the air temperature and relative humidity sensors collected at the corresponding Bonanza Creek Long Term Ecological Research climate stations.
DOI: 10.5281/zenodo.6407289
title: Dataset - Spatially explicit linkages between redox potential cycles and soil moisture fluctuations

description: This repository holds data collected during three lysimeter experiments where laboratory column scale lysimeters have been subjected to different wetting/drainage cycles. The lysimeters have been filled with forest soil in the Lausanne forest characterised by the SwissMEX project The following dataset contains soil redox potential and soil moisture measurements that have been continuously monitored in time for different depths. Pore water samples of specific dissolved chemicals have been collected at the end of each cycle. Specifically, this dataset is composed by the following files: "Lysimeter_configuration.png" illustrates the lysimeter used and the sensors scheme adopted. "METADATA.txt" contains specific information about each recorded variable and data point collected throughout the three experiments SM-B, SM-I1 and 2. Pore water analysis data Soil moisture and tension data Soil redox potential data We thank Pascal Froidevaux for providing the lysimeter used for SM-B experiment. The authors acknowledge key funding provided by the Swiss National Science Foundation through its grant number CRSII5 186422.
DOI: 10.6073/pasta/528aaf6b103a7ff29e1fa95f13e69ae5
title: Bonanza Creek LTER: Hourly Pyranometer (PYR) Measurements from 1988 to Present in the Bonanza Creek Experimental Forest and the Caribou-Poker Creeks Research Watershed near Fairbanks, Alaska

description: The pyranometers measure the energy flux density of global sun plus sky radiation across a broad band from 280 to 2800 nm. The sensor consists of a silicon photodiode which does not have an equal spectral response across the band. However, this does not cause serious error for measurements of solar radiation, provided the spectral distribution is not altered, such as within plant canopies. Winter measurements may be inaccurate due to snow cover.
DOI: 10.6084/m9.figshare.16834790
title: Crown heights in the permanent teeth of 47,XXY males and 47,XXX females

description: Earlier results based on dental casts and radiographs have shown that additional X and Y chromosomes influence permanent and deciduous tooth crown sizes, with 47,XYY males exhibiting greater crown heights than 46,XY males. We studied here the effect of both X and Y chromosomes on tooth crown heights. The series consisted of 48 47,XXY males, 22 of their male relatives, and seven 47,XXX females with five female relatives. The population controls consisted of 27 males and 33 females. Measurements of all applicable teeth except for the third molars on both sides of the jaws were made on panoramic radiographs with a sliding digital calliper. Apart from a few teeth, the mean crown heights in the 47,XXY males were greater than those in the male population controls, the differences being statistically significant for one tooth in the maxilla and ten teeth in the mandible. With the exception of two teeth, the 47,XXX females had taller tooth crowns than the female population controls, the differences in the two teeth being statistically significant. The 47,XXY males had greater tooth crown heights than the 47,XXX females, except in one tooth, and the differences were significant in two teeth. The tooth crown heights of the male relatives of the 47,XXY males and the female relatives of the 47,XXX females were close to those in the general population. The present results demonstrated the effect of additional X and Y chromosomes in increasing crown heights. The differences between the 47,XXY males and 47,XXX females indicated a stronger effect of a Y chromosome on tooth crown height than of an X chromosome.
DOI: 10.6084/m9.figshare.16834790.v2
title: Crown heights in the permanent teeth of 47,XXY males and 47,XXX females

description: Earlier results based on dental casts and radiographs have shown that additional X and Y chromosomes influence permanent and deciduous tooth crown sizes, with 47,XYY males exhibiting greater crown heights than 46,XY males. We studied here the effect of both X and Y chromosomes on tooth crown heights. The series consisted of 48 47,XXY males, 22 of their male relatives, and seven 47,XXX females with five female relatives. The population controls consisted of 27 males and 33 females. Measurements of all applicable teeth except for the third molars on both sides of the jaws were made on panoramic radiographs with a sliding digital calliper. Apart from a few teeth, the mean crown heights in the 47,XXY males were greater than those in the male population controls, the differences being statistically significant for one tooth in the maxilla and ten teeth in the mandible. With the exception of two teeth, the 47,XXX females had taller tooth crowns than the female population controls, the differences in the two teeth being statistically significant. The 47,XXY males had greater tooth crown heights than the 47,XXX females, except in one tooth, and the differences were significant in two teeth. The tooth crown heights of the male relatives of the 47,XXY males and the female relatives of the 47,XXX females were close to those in the general population. The present results demonstrated the effect of additional X and Y chromosomes in increasing crown heights. The differences between the 47,XXY males and 47,XXX females indicated a stronger effect of a Y chromosome on tooth crown height than of an X chromosome.
DOI: 10.6084/m9.figshare.16834790.v1
title: Crown heights in the permanent teeth of 47,XXY males and 47,XXX females

description: Earlier results based on dental casts and radiographs have shown that additional X and Y chromosomes influence permanent and deciduous tooth crown sizes, with 47,XYY males exhibiting greater crown heights than 46,XY males. We studied here the effect of both X and Y chromosomes on tooth crown heights. The series consisted of 48 47,XXY males, 22 of their male relatives, and seven 47,XXX females with five female relatives. The population controls consisted of 27 males and 33 females. Measurements of all applicable teeth except for the third molars on both sides of the jaws were made on panoramic radiographs with a sliding digital calliper. Apart from a few teeth, the mean crown heights in the 47,XXY males were greater than those in the male population controls, the differences being statistically significant for one tooth in the maxilla and ten teeth in the mandible. With the exception of two teeth, the 47,XXX females had taller tooth crowns than the female population controls, the differences in the two teeth being statistically significant. The 47,XXY males had greater tooth crown heights than the 47,XXX females, except in one tooth, and the differences were significant in two teeth. The tooth crown heights of the male relatives of the 47,XXY males and the female relatives of the 47,XXX females were close to those in the general population. The present results demonstrated the effect of additional X and Y chromosomes in increasing crown heights. The differences between the 47,XXY males and 47,XXX females indicated a stronger effect of a Y chromosome on tooth crown height than of an X chromosome.
DOI: 10.5281/zenodo.6407377
title: SG - March 2022

description: Measurements of SG (Global) in March 2022 Light Pollution Laboratorie info
DOI: 10.5281/zenodo.6407376
title: SG - March 2022

description: Measurements of SG (Global) in March 2022 Light Pollution Laboratorie info
DOI: 10.17632/9bkjs4j73f.1
title: The Supplemental information of the manuscript "Human SRY expression at the sex determining period is insufficient to drive testis development in mouse"

description: The dataset is supplemental information of our paper entitled "Human SRY expression at the sex determining period is insufficient to drive testis development in mouse."  This file includes 1) the non-cropped gel images, 2) the supplemental gel images for genetic analysis, 3) the details about our genetic analysis protocol and the sequence result of our analyzed animals, and 4) the in vitro study data of translation study on human SRY at the murine Sry locus.
DOI: 10.17632/mfps3m6rcg.1
title: VISION trial

description: Protocol and research data of the VISION-trial
DOI: 10.5281/zenodo.6407379
title: LPL1 - March 2022

description: Measurements of LPL1 (Teide NP) in March 2022Tenerife Light Pollution Laboratorie info
DOI: 10.17632/wd8phdbmhv.1
title: selfie effects 2

description: selfie effects Korea
DOI: 10.5281/zenodo.6407378
title: LPL1 - March 2022

description: Measurements of LPL1 (Teide NP) in March 2022Tenerife Light Pollution Laboratorie info
DOI: 10.17632/5btmyt5x3z.1
title: Physico-chemical properties of peat-reduced press-pot substrates 

description: The data was processed in the manuscript "Reducing peat in substrate mixture formulations for press pots using the Taguchi method".
Here, the Taguchi design was assessed as an alternative to classical experimental design for identifying optimal peat-reduced substrate mixtures for press-pots. The substrates mixtures were composed by 50 % v/v of a professional press-pot substrate (100 % peat) with varying shares of green compost, bark compost, wood fibre and rice husks ("Composition of the press-pot substrates.xlsx").  After mixing, press pots were formed from each substrate and received an initial fertilization of 50 mg N (142.85 mg NH4NO3). The press pots were stored (randomized) in a climate cabinet at 20°C and 80 % air humidity. 

The following parameters were assessed: density, pH-value, salt content, maximum water holding capacity (WHCmax), stability and mineral N (nitrate and ammonium).  Methods and units are described in the table "Measured parameters.xlsx". The mineral N content was measured at three dates: one day after the initial fertilization, seven and 14 days after the first measurement of mineral N. An overview on the dates of the measurements is given in the table "Dates of the measurments.xlsx". The data ("Properties of the press-pot substrates.xlsx") lists the results for the selected physical and chemical properties of the press-pot substrate mixtures for each parameter and each repetition (five repetitions for all parameters but WHCmax). 
The aims of the research were to assess (a) if the combinations of the selected raw materials are suitable as press pot substrates in vegetable production and (b) if the Taguchi design is appropriate for the quality assessment of substrate blends and for the creation of algorithms to predict major characteristics of substrate mixtures.
DOI: 10.17632/84g8yxw5gh.1
title: Two-Month Individually Supervised Exercise Therapy Improves Walking Speed, Step Length and Temporal Gait Symmetry in Chronic Stroke Patients: A before-after trial

description: Gait asymmetry is common after stroke and is a major risk factor for falls. In particular, temporal gait asymmetry often remains in the chronic stage of stroke. However, health insurance does not cover rehabilitation for patients with chronic stroke in many countries. Accordingly, it is undetermined whether individually supervised exercise therapy has beneficial effects on chronic hemiparetic gait. Patients with stroke (n = 25) over 6 months after onset participated. The patients performed 70 min of individually supervised exercise therapy twice weekly for 2 months for 16 sessions with qualified personnel. The intervention significantly reduced the pre-swing phase on the paretic side. In addition, there was a significant improvement in pre-swing phase symmetry in those with great asymmetry prior to the intervention. The step length significantly increased after the intervention on both sides. The walking time at both comfortable and maximum speeds was significantly shortened. Our findings suggest that there remains scope to improve gait ability with individually supervised exercise therapy in patients with chronic stroke whose functional recovery is often considered unlikely. This type of intervention may be a simple and effective option to improve gait parameters, including temporal asymmetry, even in patients with chronic stroke.