cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5440/1364062
title: Radiocarbon in Ecosystem Respiration and Soil Pore-Space CO2 with Surface Gas Flux, Air Temperature, and Soil Temperature and Moisture, Utqiagvik (Barrow), Alaska, 2012-2014

description: Dataset includes Delta14C measurements made from CO2 that was collected and purified in 2012-2014 from surface soil chambers, soil pore space, and background atmosphere. In addition to 14CO2 data, dataset includes co-located measurements of CO2 and CH4 flux, soil and air temperature, and soil moisture. Measurements and field samples were taken from intensive study site 1 areas A, B, and C, and the site 0 and AB transects, from specified positions in high-centered, flat-centered, and low centered polygons. The column "sample_size" was added to "radiocarbon_field_Barrow_2012_2013_2014.csv" September 2018 with no changes to other data. This dataset contains one pdf and four csv files.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
DOI: 10.5440/1375316
title: Leaf Area, Vegetation Biomass and Nutrient Content, Utqiagvik (Barrow), Alaska, 2012 - 2013

description: This dataset consists of measurements of vegetation harvested from Areas A to D of Intensive Site 1 at the Next-Generation Ecosystem Experiments (NGEE) Arctic site near Barrow, Alaska. The dataset includes i) values of leaf area index, biomass, carbon (C), nitrogen (N) and phosphorus (P) content of aboveground plant parts from 0.25 m x 0.25 m clip-plots at peak growing season and ii) fine-root biomass from 5.08-cm diameter soil cores taken throughout the active layer in the same location as the clip plots in late July-early August 2012, and iii) values of aboveground biomass and nitrogen (N) content measured from 0.1 m x 0.1 m clip-plots harvested at 2-week intervals throughout the 2013 growing season. This dataset includes five csv files and one pdf file.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
DOI: 10.5440/1393836
title: Soil Organic Carbon Degradation in Low Temperature Soil Incubations from Flat- and High-Centered Polygons, Utqiagvik (Barrow), Alaska, 2012-2013

description: This dataset provides information about organic acids accumulation and ferrous ion concentrations during soil incubations at controlled temperature. Soil cores were collected in 2012 and 2013 from the flat- and high-centered polygon active layers and permafrost (when present) from the NGEE-Arctic Intensive Study Site 1, Utqiagvik (Barrow), Alaska. This dataset includes one csv file and one pdf file.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
DOI: 10.5440/1410297
title: ESI-FTICR-MS Molecular Characterization of DOM Degradation under Warming in Tundra Soils from Utqiagvik (Barrow), Alaska

description: This dataset provides the results of warming incubation of Arctic soils from trough areas of a high-center polygon at the Barrow Environmental Observatory (BEO) in northern Alaska, United States. The organic-rich soil (8-20 cm below ground surface) and the mineral-rich soil (22-45 cm below surface) were separated, and the thawed and homogenized subsamples from each soil were incubated at -2 degrees C or 8 degrees C for 122 days under anoxic conditions (headspace filled with N2). The extracted DOM from soil samples were analyzed by Fourier transform ion cyclotron resonance mass spectrometry coupled with electrospray ionization (ESI-FTICR-MS). Reported analytes include soil water content, dissolved organic carbon, total organic carbon, MS peaks' m/z and intensities, and elemental composition of identified molecular formulas. This dataset includes five csv files and one pdf file.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
DOI: 10.5440/1410348
title: Stable Isotope and Geochemical Evidence for Hydrological Isolation in an Arctic Coastal Plain Landscape, Barrow, Alaska, 2013

description: Data include results from water chemistry and water isotope analyses for samples collected in Barrow, Alaska during July and September 2013. Samples were from surface and soil pore waters from 15 locations: 3 locations from interlake polygonal terrain, 6 locations associated with interlake drainages, and 6 locations within or at the outlets of different aged drained thaw lake basins (DTLBs). Samples were taken in different drainage flow types at three different depths at each location in and around the Barrow Environmental Observatory. This dataset includes one .csv data file and one .pdf user guide.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a 15-year research effort (2012-2027) to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
DOI: 10.15468/dl.yg9vtv
title: Occurrence Download

description: A dataset containing 300 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cynodon plectostachyus (K.Schum.) Pilg.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 300 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035289-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5440/1418852
title: Radiocarbon in CO2 and Soil Organic Matter from Laboratory Incubations, Utqiagvik (Barrow), Alaska, 2012

description: Dataset includes one CSV data file of Delta14C measurements made from soil organic matter and CO2 from laboratory soil incubations of active layer soils collected in Utqiagvik (Barrow), Alaska in 2012. In addition to Delta14CO2, the dataset includes CO2 production rates and carbon and nitrogen concentrations. Samples were collected from intensive study site 1 areas A, B, and C, and the site 0 and AB transects, from specified positions in high-centered, flat-centered, and low centered polygons. The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a 10-year research effort (2012-2022) to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
DOI: 10.5440/1418853
title: Radiocarbon in CO2 and Soil Organic Matter from Laboratory Incubations, Utqiagvik (Barrow), Alaska, 2014

description: Dataset includes 14C measurements made from soil organic matter and CO2 from paired anaerobic and aerobic laboratory soil incubations of active layer soils collected in Barrow, Alaska in 2014. In addition to 14CO2, dataset includes CO2 production rates and carbon and nitrogen concentrations. Samples were collected from intensive study site 1 areas A, B, and C, and the site 0 and AB transects, from specified positions in high-centered, flat-centered, and low centered polygons. This dataset contains one csv file and one pdf file.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
DOI: 10.5440/1423892
title: In Situ Soil Moisture and Thaw Depth Measurements Coincident with Airborne SAR Data Collections, Barrow and Seward Peninsulas, Alaska, 2017

description: The in-situ soil moisture and thaw depth measurements provided in this dataset were collected coincident with airborne overflights of L- and P-band SAR instruments at the NGEE Arctic study site near Barrow, on the North Slope, and at the three study sites on the Seward Peninsula, Alaska. Field measurements and flights were conducted during the summer of 2017 as a collaboration between the NASA ABoVE Project's Airborne SAR Campaign and the NGEE Arctic Project. ABoVE protocols for establishing field measurement plots were followed. NGEE Arctic plots for the ground-based measurements are located at existing study sites where SAR data would also add value to current monitoring and characterization efforts of the NGEE Team. The ground-based data will be used by ABoVE to analyze, calibrate and validate the remote sensing products. In November 2020, a Version 2 (V2) set of in situ soil moisture and thaw depth measurement data files were released. This dataset contains 1 pdf, 2 zip files, and 7 csv files. The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy?s Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
DOI: 10.6084/m9.figshare.26367556
title: Supplementary Excel Files

description: These files are related to the following paper:<br>William P. Inskeep, Zackary J. Jay, Luke J. McKay and Mensur Dlakic (2024) Respiratory processes of early evolved thermophiles in sulfidic and low-oxygen filamentous microbial communities, In review.<br><b>Supplementary Data 1</b>. Transcript abundance of genes identified in MAGs from <i>Octopus Spring</i> sampled on October 11, 2011 [MAG Assignment = Table 1; TPM = transcripts per million].<b>Supplementary Data 2</b>. Transcript abundance of genes identified in MAGs from <i>Octopus Spring</i> sampled on November 9, 2016 [MAG Assignment = Table 1; TPM = transcripts per million].<b>Supplementary Data 3</b>. Transcript abundance of genes identified in MAGs from <i>Conch Spring</i> sampled on November 9, 2016 [MAG Assignment = Table 1; TPM = transcripts per million].
DOI: 10.6084/m9.figshare.26367556.v1
title: Supplementary Excel Files

description: These files are related to the following paper:<br>William P. Inskeep, Zackary J. Jay, Luke J. McKay and Mensur Dlakic (2024) Respiratory processes of early evolved thermophiles in sulfidic and low-oxygen filamentous microbial communities, In review.<br><b>Supplementary Data 1</b>. Transcript abundance of genes identified in MAGs from <i>Octopus Spring</i> sampled on October 11, 2011 [MAG Assignment = Table 1; TPM = transcripts per million].<b>Supplementary Data 2</b>. Transcript abundance of genes identified in MAGs from <i>Octopus Spring</i> sampled on November 9, 2016 [MAG Assignment = Table 1; TPM = transcripts per million].<b>Supplementary Data 3</b>. Transcript abundance of genes identified in MAGs from <i>Conch Spring</i> sampled on November 9, 2016 [MAG Assignment = Table 1; TPM = transcripts per million].
DOI: 10.5440/1429875
title: Leaf Chlorophyll and Total Carotenoid Content, Utqiagvik (Barrow), Alaska, 2013-2015

description: Chlorophyll a, Chlorophyll b and total carotenoid content were determined on 146 samples collected from Arctic plant species within the Barrow Environmental Observatory in 2013 and 2015. Species sampled are Arctophila fulva, Arctagrostis latifolia, Carex aquatilis, Dupontia fisheri, Eriophorum angustifolium, Petasites frigidus, Salix pulchra, Vaccinium vitis-idaea, Salix rotundifolia, Luzula arctica and Saxifraga punctata. Samples collected in vegetation plots and outside vegetation plots over an area of approximate 1 km2 centered at 71.275 degrees N, 156.641 degrees W. This dataset includes one csv, one xlsx, and one pdf file.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
DOI: 10.5440/1430079
title: NGEE Arctic Leaf Spectral Reflectance, Kougarok Road, Seward Peninsula, Alaska, 2016

description: Measurements of full-spectrum (i.e. 350-2500nm) leaf spectral reflectance of Arctic plant species. Data were collected along NGEE sites in the Seward Peninsula, Alaska during the 2016 period. Data collected to measure leaf-level spectral optical properties of Arctic plants to enable scaling. This dataset contains 1 zipped file, 1 csv file, 1 xlsx file, and 1 pdf file.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
DOI: 10.5440/1430080
title: Leaf Mass Area, Leaf Carbon and Nitrogen Content, Kougarok Road and Teller Road, Seward Peninsula, Alaska, 2016

description: Carbon, Nitrogen and Leaf Mass Area of leaves sampled from locations on the Kougarok Rd (transect A) & Teller Rd NGEE Arctic study sites, Seward Peninsula, Alaska. Species include: Alnus viridis spp. fruticosa, Arctostaphylos rubra, Betula glandulosa, Chamerion latifolium, Petasites frigidus, Salix alaxensis, Salix glauca, Salix pulchra, Salix richardsonii and Vaccinium uliginosum. This dataset contains 1 *.xlsx file, 1 *.pdf file, and 2 *.csv files.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).
DOI: 10.5440/1437044
title: NGEE Arctic Leaf Spectral Reflectance and Transmittance, Barrow, Alaska, 2014-2016

description: Data were collected to characterize the leaf-level optical properties and albedo of dominant Arctic tundra species in the Barrow, AK area and to enable trait scaling. Measurements of full-spectrum (i.e. 350-2500nm) leaf spectral reflectance of Arctic plant species. Data were collected in Barrow, Alaska during the 2014-2016 period. This dataset contains 5 zipped folders, 4 csv, 4 xlsx, 1 txt, and 1 pdf files.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).