cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25375/uct.22308961.v1
title: Characterisation of dust-sized coal particulates: X-ray Diffraction analysis, crystallite size calculation and reformatting of mineralogical data

description: This dataset composes two excel workbooks which contain the resulting information of the XRD analysis conducted on 17 coal particulate samples. The first workbook contains three spreadsheets which demonstrate the quantitative identification and distribution of minerals amongst the samples. <br> Sheet 1 represents the minerals distributions and their normalised values calculated by accounting for the carbonaceous content in each sample. Sheet 2 contains the mineral to element conversion calculations. Sheet 3 presents the mineral distribution data in a format that this complementary to the mineral groups analysed by the QEMSCAN. The second workbook contains one sheet which demonstrates the crystallite size of the main minerals within the samples (quartz, kaolinite, and pyrite).
DOI: 10.17632/fnkg2zc76f
title: Ga concentration in 142°E section

description: The original data of Ga concentration, salinity, temperature and dissolved oxygen in 142°E section.
DOI: 10.6084/m9.figshare.24878253.v1
title: Augmentation of Omicron BA.1 pathogenicity in hamsters using intratracheal inoculation

description: The Omicron BA.1 variant of SARS-CoV-2 displays an attenuated phenotype in the Syrian hamster after intranasal inoculation. This is characterized by reduced viral replication and lung pathology in the lower respiratory tract. Here, we report that intratracheal inoculation with Omicron BA.1 recovers the lower respiratory tract replication and pathogenicity as observed with other lineages.
DOI: 10.6084/m9.figshare.28824101.v1
title: Table 1.docx

description: In this study, we characterize and compare gut microbiota profiles of healthy controls, patients with erythrodermic cutaneous T cell lymphoma(ECTCL) and erythrodermic atopic dermatitis(EAD), and identify biomarkers for differentiating EAD and ECTCL patients.
DOI: 10.17632/myd5bcf37d
title: Lack of agreement among analysers of infrared thermal images in the temperature of eye regions in sheep

description: Infrared thermography (IRT) is a non-invasive method to estimate body temperature in many animal species. The eye has been indicated as the ideal region for IRT, potentially serving as an early indicator of variations in body temperature triggered by various events and stimuli. Studies are being conducted to understand sources of variation in IRT temperature of the eye and develop comprehensive guidelines for veterinary medicine and animal production purposes. The present study adds information about variation in temperature estimated from different eye regions in sheep due to analysers. Thirty-one thermal images, fifteen of the right and sixteen of the left eyes of a ewe, captured with a FLIR E8-XT camera, were analysed by each of three analysers, and minimum (Tmin), maximum (Tmax) and average (Tavg) temperature in lacrimal caruncle (R1), medial canthus of the eye (R2) and eyeball (R3) were estimated. Differences among analysers were analysed by ANOVA (normal distribution) or Friedman test (non-normal distribution), considering thermal images as blocks. Limits of Agreement with the Mean (LOAM) were estimated and agreement plots were drawn. There were no differences (P&gt;0.05) among analysers in temperature (°C, mean±standard deviation or median and 2.5%-97.5% quantiles) estimated in R1 (Tmin=36.3±0.87, Tmax=37.2 (35.9-37.7), Tavg=36.7±0.67), R2 (Tmax=37.2 (36.0-37.8)) and R3 (Tavg=36.1 (34.9-37.3)) for the right eye (n=45), and in R1 (Tmin=36.0 (34.3-37.3), Tmax=36.8±0.49, Tavg=36.4±0.53), R2 (Tmin=35.9±0.71, Tmax=36.7 (35.8-37.7), Tavg=36.3 (35.5-37.5)) and R3 (Tavg=35.9 (34.8-36.6)) for the left eye (n=48); but differences (P&lt;0.05) were present in R3 (Tmin, Tmax) for both eyes and in R2 (Tmin and Tavg) for the right eye. The highest mean differences in temperature (°C) (P&lt;0.05) among analysers were in R3 from the right eye (Tmin=0.70, Tmax=0.25) and the left eye (Tmin=0.64, Tmax=0.10), and in R2 from the right eye (Tmin=0.54, Tavg=0.50). Considering both eyes and all eye regions, the total range for the LOAM (°C) was lower for Tmax (0.42 to 0.93) and Tavg (0.63 to 1.17) than for Tmin (1.49 to 2.70), indicating a higher, medium, and lower agreement among analysers for Tmax, Tavg and Tmin, respectively. Considering the eyes, the total range for the LOAM (°C) was lower in all regions from the left eye (0.42 to 1.59) compared to the right eye (0.79 to 2.70), indicating a higher agreement among analysers from the left eye. Considering the eye regions, the total range for the LOAM (°C) was generally higher in R3 (0.84 to 3.70) than in R1 (0.61 to 1.79) and R2 (0.42 to 2.03), indicating the lowest agreement among analysers in R3 for Tmin (3.70). The present study shows that in sheep, the lacrimal caruncle confers the best agreement among analysers for all estimated temperatures, and that Tmax, across different eye regions, should be regarded as the most reliable estimation.
DOI: 10.17632/ntscr2777k
title: QuTiP: An open-source Python framework for the dynamics of open quantum systems

description: This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018) Abstract We present an object-oriented open-source framework for solving the dynamics of open quantum systems written in Python. Arbitrary Hamiltonians, including time-dependent systems, may be built up from operators and states defined by a quantum object class, and then passed on to a choice of master equation or Monte Carlo solvers. We give an overview of the basic structure for the framework before detailing the numerical simulation of open system dynamics. Several examples are given to illustrate... Title of program: QuTiP: The Quantum Toolbox in Python Catalogue Id: AEMB_v1_0 Nature of problem Dynamics of open quantum systems Versions of this program held in the CPC repository in Mendeley Data AEMB_v1_0; QuTiP: The Quantum Toolbox in Python; 10.1016/j.cpc.2012.02.021 AEMB_v2_0; QuTiP: The Quantum Toolbox in Python; 10.1016/j.cpc.2012.11.019
DOI: 10.17632/p5znz78ttw
title: Laboratory Electric Field Measurements

description: Electric field quantification data from laboratory experiment.
DOI: 10.6084/m9.figshare.20220069.v1
title: SciSciNet_PaperAuthorAffiliations

description: SciSciNet_PaperAuthorAffiliations
DOI: 10.17632/9cxx5nmdyp
title: Responses to alternative harvesting practices in drained peatland forest: water table level and spruce needle chlorophyll fluorescence

description: Data used in the research article “Vegetation controls of water and energy balance of a drained peatland forest: responses to alternative harvesting practices” (Haahti et al., AFM 2020): spruce_Fv_FM.csv contains the ratio of variable chlorophyll fluorescence to maximal chlorophyll fluorescence (Fv/Fm) measured from current-year and one-year-old spruce needles in the partial harvested (n=50) and the non-harvested (n=20) stand during two post-treatment growing seasons. WTL.csv contains the processed daily water table level as distance from the soil surface (mean, maximum, minimum) for the non-harvested stand (2010-2018) and for the clear-cut and partial harvested sites (2016-2018).
DOI: 10.17632/d9tktn546v
title: Do irrigation solutions have effect on the bonding of direct restorations to the deep margin elevation material? An in-vitro Study

description: Microtensile dataset (MPa)
DOI: 10.17632/j4xdjfxskk
title: Negative, post-smallpox vaccination and post-MPXV infection sample MFIs used in the development of the MpoxPlex Luminex assay

description: MpoxPlex is a multiplexed assay measuring serum IgG antibodies specific to twelve Mopox virus (MPXV) and vaccinia (VACV) antigens. These antigens include VACV proteins B5, A27, A33, and MPXV proteins E8, B6, B2, M1, A27, A35, H3, A29, A5. 

To assess the characteristics of MpoxPlex, a number of negative, post-smallpox vaccination and post-MPXV infection samples were run through the assay.

This data repository file contains the mean fluorescence intensities (MFI) achieved for each sample against each antigen in the assay. Samples are split into three categories based on their exposure history: no exposure (NEGATIVE tab), post-vaccination with the IMVANEX vaccine (VACCINATED tab) and post-infection with MPXV (MPXV tab). Samples are listed with a unique identifier (UI), their date of birth (DOB) and sex if known, and any confounding condition (negative confounding cohort only). Samples are also grouped into the following: confounders (samples from individuals with a pre-existing condition), paediatric, pre-IMVANEX, MPX (infected with MPXV during the 2022 outbreak), His.MPX (infected with MPXV before the 2022 outbreak) and 14-240 days post-dose 1 or 2 of IMVANEX.

Additional sample details can be found in the preprint: https://doi.org/10.1101/2024.06.03.24308186.
DOI: 10.17632/gnnb74wyyh
title: Dataset of validating and enhancing the ecotourist identification scale using a Rasch model measurement: A study of Indonesian domestic tourist

description: Dataset of validating and enhancing the ecotourist identification scale using a Rasch model measurement approach: A study of Indonesian domestic tourist. This data is run properly with the Winsteps software.
DOI: 10.6084/m9.figshare.22346569.v1
title: Supplementary Material for: Genomic and Immune Features in an Intrahepatic Cholangiocarcinoma Patient with Microsatellite Instability-High Suffered Rapid Acquired Resistance to PD-1 Inhibitor

description: Introduction: Intrahepatic cholangiocarcinoma (ICC) is a highly aggressive liver malignancy with poor prognosis. Recently, the development of immune checkpoint inhibitors (ICIs), such as programmed cell death 1 (PD-1) inhibitors, has emerged as a promising strategy in multiple tumor types, including ICC. Microsatellite instability-high (MSI-H) is an important biomarker for ICIs in solid tumors. The response rate in patients with MSI-H is significantly higher than in those with microsatellite stability/ microsatellite instability-low (MSS/MSI-L). And approximately 80% to 90% of the patients with MSI-H could maintain sustained clinical benefits once they had an initial response. However, some patients could have primary resistance at the beginning, and some might have acquired resistance after long-term treatment. Case Presentation: We present the case of an ICC patient with MSI-H who suffered rapid progression after a short-term remission with Camrelizumab, a kind of PD-1 inhibitor, as second-line treatment. The patient’s genomic and immune features were analyzed by next-generation sequencing and multiplex immunofluorescence staining (mIF) to explore the possible mechanisms of the rapidly acquired resistance of ICIs in this MSI-H case. Discussion/Conclusion: The genomic and immunohistochemical analysis showed that TGFBR2 mutation, loss of HLA B44 supertype, carrying B62 supertype, and increased PD-L1+ cells, macrophages and Tregs in the tumor microenvironment might be related to the non-sustain benefit of ICIs in this MSI-H patient.
DOI: 10.17632/pdd5c6jvg3
title: Emotional response in babies' pupil contagion

description: Raw data and analysis code presented in Tsuji et al. (2023) Emotional response in babies' pupil contagion.
DOI: 10.17632/4fb8pvg2zm
title: Data for: Application of online multitask learning based on least squares support vector regression in the financial market

description: These historical transaction data of financial market are downloaded from the official website of Investing, and which constitute the following stock index dataset, bond index dataset, forex index dataset, and gold index dataset, where the web address is (https://cn.investing.com/).

The stock index dataset is mainly composed of 1220 historical opening index values of the four China’s stock indices, which are the Shanghai Securities Composite Index (SSEC), the SZSE Component Index (SZI), the Growth Enterprise Index (CNT), and the SSE SME Composite Index (SZSMEPI). The time period is from January. 1st, 2014 to December. 31th, 2018.

The bond index dataset is mainly composed of 1219 historical opening price values of the four China’s bond indices, which are the Shanghai Securities National Bond Index (SSEBI), the Shanghai Securities Company Bond Index (SSECBI), the Shanghai Securities Enterprise Bond Index (SSEEBI), and the Shanghai Securities 5-year Term Credit Bond Inde (SSE5YCB). The time period is from January. 1st, 2015 to December. 31th, 2019.

The forex index dataset mainly consists of 1043 historical data of the exchange rate between the four currencies and RMB, which are the United States Dollar to RMB (USD-CNY), the Canadian Dollar to RMB (CAD-CNY), the Euro to RMB (EUR-CNY), and the Swiss Franc to RMB (CHF-CNY). The time period is from January. 1st, 2016 to December. 31th, 2019.

The Gold index dataset is mainly composed of 1213 historical opening price values of the four precious metal spots, which are the London gold (XAU), trading-delayed gold (AUTD), London silver (XAG), and trading-delayed silver (AGTD). The time period is from January. 1st, 2015 to December. 31th, 2019.

Since the four data sets are all financial time series, they can be used to verify the financial time series model. At the same time, the time series in each data set have a strong correlation, so it can be used to verify the multi-task learning model.
DOI: 10.17632/g2yb9nytjs
title: Multi-objective Optimization using ANN and Quadratic Model

description: This dataset contains CCD result data for pullulan extraction using the solvent method and codes for developing linear regression and artificial neural network (ANN) models to optimize the extraction process (i.e., solvent-to-broth ratio, pH, and incubation time). It includes scripts for performing sensitivity analysis, desirability testing, and multi-objective optimization for three responses (i.e. pullulan recovery, sucrose equivalent, and protein impurities). The package also provides code to generate response surface methodology (RSM), an ANN residual plot to evaluate model accuracy, and Pareto front analysis to identify optimal trade-offs between competing objectives.
DOI: 10.6084/m9.figshare.24203871.v1
title: Supplementary Material for: Is frailty different in younger adults compared to old? Prevalence, characteristics and risk factors of early-life and late-life frailty in samples from Sweden and UK

description: Introduction Although frailty is commonly considered as a syndrome of old individuals, recent studies show that it can affect younger adults, too. Whether and how frailty differs in younger adults compared to old is however unknown. To this end, we analyzed the prevalence, characteristics, and risk factors of early-life (aged &lt;65) and late-life (aged ≥65) frailty. Methods We analyzed individuals in the UK Biobank (N=405 123) and Swedish Screening Across the Lifespan Twin (SALT; N=43 641) study. Frailty index (FI) scores ≥0.21 were used to demarcate frailty. Characteristics of early-life vs late-life frailty were analyzed by collating the FI items (deficits) into domains and comparing the domain scores between younger and older frail individuals. Logistic regression was used to assess the risk factors of frailty. Results The pooled prevalence rates of frailty were 10.3 % (95% CI 2.7-32.7), 14.4 % (95% CI 4.5-37.2), 19.2 % (95% CI 2.5-68.5) in individuals aged ≤55, 55-64, 65-74, respectively. Younger frail adults (aged &lt;65) had higher scores in immunological, mental wellbeing, and pain-related domains, whereas older frail adults (aged ≥65) had higher scores in cardiometabolic, cancer, musculoskeletal, and sensory-related domains. Higher age, female sex, smoking, lower alcohol consumption, lower education, obesity, overweight, low income, and maternal smoking were similarly associated with the risk of early-life and late-life frailty. Conclusion Frailty is prevalent also in younger age groups (aged &lt;65), but differs in some of its characteristics from the old. The risk factors of frailty are nevertheless largely similar for early-life and late-life frailty.
DOI: 10.17632/gdf5fj7f2s
title: Large-scale assessment of genetic diversity and population connectivity of Amazonian jaguars (Panthera onca) provides a baseline for their conservation and monitoring in fragmented landscapes (Microsatellite loci dataset)

description: Jaguar population genetics has so far not been investigated on a broad scale in the Amazon rainforest, which constitutes the largest remaining block of continuous habitat for the species. Given its size, it serves not only as a stronghold but also as a reference for jaguar conservation genetics, against which fragmented landscapes can be compared. We assessed genetic diversity and population structure of Amazonian jaguars using 11 microsatellite loci and performed comparative analyses incorporating available data from two other South American biomes (Pantanal and Atlantic Forest) in which the species has faced different amounts of habitat loss and fragmentation. Using the largest genetic data set assembled to date for jaguars (n=190), we observed that all diversity indices were consistently higher for the Amazonian population, with no genetic subdivision detected in that region, indicating large-scale connectivity across &gt;3000 km. In contrast, we corroborate the inference of anthropic-driven genetic structure and bottlenecks for two Atlantic Forest populations. Our results indicate that the Amazon is a critically important stronghold for jaguars, comprising a highly diverse, panmictic population that allows a glimpse into the patterns of genetic connectivity that characterized this species prior to human intervention. In contrast, the Atlantic Forest populations jointly still retain considerable levels of genetic diversity, but this is currently partitioned among isolated fragments that are increasingly subjected to heavy anthropic disturbance. These results have important implications for jaguar conservation planning, highlighting the critical condition of Atlantic Forest populations and providing a genetic baseline to which they can be compared.
DOI: 10.6084/m9.figshare.23740173.v1
title: Datasets

description: The model inputs and configurations used to run the model for the all targeted TCs, and the model outputs used in the manuscript. All figures in the manuscript can be visualized using attatched grads ctl and script files.
DOI: 10.11583/dtu.13083953.v1
title: Systematic design of 3D auxetic lattice materials with programmable Poisson’s ratio for finite strains

description: This data set contains a STL file of one auxetic material presented in Wang, F. (2018). Systematic design of 3D auxetic lattice materials with programmable Poisson’s ratio for finite strains. Journal of the Mechanics and Physics of Solids, 114, 303-318.
DOI: 10.17632/fnk8krrgpy
title: DLS-data for nanoparticle characterisation of 1,4-DHP and calix[4]arenes

description: Characterisation of two-component nanoformulations comprised from cationic amphiphilic 1,4-DHP as one component and the appropriate cationic amphiphilic calix[4]arene as another component  at mol% ratios of 100/0, 75/25, 50/50, 25/75, and 0/100; starting from single the appropriate calix[4]arene (100/0) in the first sample and single 1,4-DHP (0/100) in the last sample. The obtained results - hydrodynamic diameters of the main population of nanoparticles, polydispersity index and z-potential of nanoparticles formed by 1,4-DHP/calix[4]arene compositions in aqueous medium determined by the DLS method are presented. Dynamic light scattering (DLS) instrument Zetasizer Nano ZSP (Malvern Panalytical Ltd.) with Malvern Instruments Ltd. Software 7.12 was used for evaluation of self-assembling properties of pure cationic 1,4-DHP and calix[4]arene derivatives and characterisation of obtained nanoparticles formed by them in different ratios or individually.
DOI: 10.17632/b2cbxsnvcx
title: Data for: Determination of scoring functions for protein damage susceptibility

description: The Upload consists of 3 folders: 'data' contains all the data worked with from the original Download to the steps between preprocessing to the final state. 'programs' contains all the perl programs that where used for this work plus the score table. 'output' contains all the results for the pdb and the collagen data sets. Additionally there is a libre office table calculation file with the 100 susceptible an unsusceptible results for every score on the pdb data set.
DOI: 10.6084/m9.figshare.28826414.v2
title: Contact Observations from an Intensive Care Unit - Supplementary

description: Little fine-grained, empirical motion and interaction data is available for working hospital environments (refer to our paper for more information)
DOI: 10.6084/m9.figshare.3557616.v1
title: Appendix B. Description of sediment properties at the experiment site.

description: Description of sediment properties at the experiment site.
DOI: 10.17632/9rtcrfj3d7
title: Data for: An Integrated Biophysical and Economic Modeling Framework for Long-Term Sustainability Analysis: the HARMONEY Model

description: These files are the two simulation codes for the Human And Resources with MONEY (HARMONEY) model. These codes, programmed in the R language, were used to produce the simulation results in the main paper and supplemental information of "An Integrated Biophysical and Economic Modeling Framework for Long-Term Sustainability Analysis: the HARMONEY Model". The codes also produce several plots in the R plot window. HARMONEY_SetPriceByConstantMarkup: This simulates the results that assume a constant price markup, as defined in the paper. HARMONEY_SetPriceByVariableMarkup: This simulates the results that assume a "variable" price markup, as defined in the paper. When running the code, it might not simulate to the end time for all combinations of parameter choices. This occurs for parameters that lead to system "collapse" when the net power flow from the extraction sector reaches zero. It is best to change the parameter values slightly from those listed as being used in the simulations of the paper. If you have trouble seeing results, reduce the simulation time by reducing the "to" value in this line of code: times
DOI: 10.17632/d587ftbkd2
title: Data for: The Detection of Low-rate DoS Attack Using SADBSCAN Algorithm

description: We simulate the attack scenario on the NS-2 emulator. The network consists of three routers, 25 users (10 users for background traffic) and one attacker. The bottleneck link is from router 2 to router 3 with a bandwidth of 10 Mbps. The users access the server by establishing TCP connections. The attacker sends UDP packets for low-rate DoS attack. The TestBed is a real network scenario we build with seven hosts (6 users and 1 attacker) and two routers. The bottleneck link is from router 1 to router 2 with a bandwidth of 10 Mbps.
DOI: 10.6084/m9.figshare.24116598.v1
title: Cycling performance dataset

description: Data in CSV format contains the following properties: Doi,Year,Name,Abbreviation,Sintering temperature,Sintering time,Category,Cycle,Capacity,Retention,Current: mAg-1,Current: C,Voltage lower limit,Voltage upper limit,Elements
DOI: 10.17632/67sjx5y6xc
title: Data for: Preparation 2-(anthracen-9-yl)-1,3-dithiolane as a novel dual-channel AIE-active fluorescent probe for mercury (II) ion with excellent performance

description: A novel fluorescent probe molecule, 2-(anthracen-9-yl)-1,3-dithiolane (AADT), is designed and synthesized for Hg2+ detection successfully, based on a good aggregation induced emission (AIE) fluorescent mechanism and a specific reaction type. DMF-H2O mixed solvent (Fw 80% V/V) is suitable to disperse AADT for forming 1×10-5 mol·L-1 solution with an AIE-active fluorescence probe system. With the increase of trace Hg (II), the AADT probe shows dual-channel, (turn-off at 429 nm, and turn–on at 511nm) fluorescence probe character. (R2&gt;0.994), which does not interfere each other. The probe demonstrates excellent selectivity, anti-inference properties, and several metal ions and acid ions hardly affect its performance. The LOD of the AADT probe is lower than 2.34×10-8 mol·L-1.