cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25504/fairsharing.2hh7g7
title: FAIRsharing record for: Genomic Contextual Data Markup Language
title: GCDML

description: This FAIRsharing record describes:  The Genomic Contextual Data Markup Language (GCDML) is a core project of the Genomic Standards Consortium (GSC) that is a reference implementation the Minimum Information about a Genome Sequence (MIGS/MIMS/MIMARKS), and the extensions the Minimum Information about a Metagenome Sequence (MIMS) and Minimum Information about a MARKer gene Sequence (MIMARKS).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ve0710
title: FAIRsharing record for: Molecular Interaction Tabular
title: PSI-MI TAB

description: This FAIRsharing record describes:  The Proteomic Standards Initiative Molecular Interactions (PSI-MI) data interchange format is a common tab-delimited (TAB) molecular interactions format (versions 2.5 - 2.8). Format developments, including the latest version release can be found at the homepage. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.wz1w7t
title: FAIRsharing record for: Minimum Information About a Spinal Cord Injury experiment
title: MIASCI

description: This FAIRsharing record describes:  MIASCI is a reporting standard for metadata regarding preclinical spinal cord injury (SCI) experiments.  It is based on other reporting standards such as MIAME: minimal information about a microarray experiment. The project aims to improve the replicability of SCI research findings through this minimum information standard for describing SCI experiments and their results, and an ontology to formally describe SCI concepts and the relationships between them. Please note that the ontology remains available, even though MIASCI Online is non-functional. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.pw2hnb
title: FAIRsharing record for: Microbiological Common Language
title: MCL

description: This FAIRsharing record describes:  MCL is a data exchange standard for microbiological information. In short, MCL defines terms which can be used to reference and describe microorganisms. It is designed to form a simple and generic framework leveraging the electronical exchange of information about microorganisms. MCL is loosely coupled from its actual representation technologies and is currently used to structure XML and RDF files.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.4z037c
title: FAIRsharing record for: LINCS Extended Metadata Standard: Antibody Reagents
title: LINCS 2: Antibody Reagents

description: This FAIRsharing record describes:  LINCS Production Phase 2 Extended Metadata Standards were developed by the LINCS consortium with the goal of generating an integrated view across the diverse LINCS data resources. These guidelines are focused on the minimum required information to model LINCS assays and results and have been recommended by LINCS for adoption beyond the LINCS project. Antibodies are extremely useful because of their high target specificity in detection of proteins, capture of proteins for isolation, purification and quantification, and selective inhibition of protein function (e.g., membrane receptor). Important metadata to be reported include a standardized name and ID of the antibody, identity of the target protein, target organism, information on the immunogen (name, source, modification of the protein/peptide), antibody clonality, antibody isotype, antibody purity, antibody specificity, and whether it was used as a primary or secondary antibody in an assay.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.xjx7vy
title: FAIRsharing record for: LINCS Extended Metadata Standard: Proteins
title: LINCS 2: Proteins

description: This FAIRsharing record describes:  LINCS Production Phase 2 Extended Metadata Standards were developed by the LINCS consortium with the goal of generating an integrated view across the diverse LINCS data resources. These guidelines are focused on the minimum required information to model LINCS assays and results and have been recommended by LINCS for adoption beyond the LINCS project. A standardized description of protein reagents is critical to link results of different LINCS assay types. Protein reagents need to be identified in a manner that enables screening results associated with a specific protein reagent (e.g., KINOMEscan) to be linked with data obtained by other assays in which that protein participates as a (material) component (e.g., in a cell-based assay readout via the L1000 transcript profiling method).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.4877h0
title: FAIRsharing record for: Orthology Ontology
title: ORTH

description: This FAIRsharing record describes:  ORTH ontology is designed to describe sequence homology data such as gene region, gene and protein-centric orthology, paralogy, and xenology information. Depending on the database, the homology information is structured in different ways. ORTH ontology accommodates these disparate data structures in a single terminology.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.kg1x4z
title: FAIRsharing record for: Mammalian Phenotype Ontology
title: MP

description: This FAIRsharing record describes:  The observable morphological, physiological, behavioral and other characteristics of mammalian organisms that are manifested through development and lifespan.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.8vv5fc
title: FAIRsharing record for: Minimum Information About a Proteomics Experiment
title: MIAPE

description: This FAIRsharing record describes:  MIAPE attempts to define the minimum set of information about whole proteomics experiments that would be required by a public repository.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.b3c5ck
title: FAIRsharing record for: Bilingual lexicon of water related texts and data
title: Lexeau

description: This FAIRsharing record describes:  This terminology is also known as the Lexique bilingue des textes et des données sur l'eau. The Lexeau project is in the research and developement stage, using existing software to test the lexicon model and user interface on specific themes of the water domain such as flooding. This resource does not have a specific homepage, and currently is only available via AgroPortal.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.hza1ec
title: FAIRsharing record for: Binary Alignment Map Format
title: BAM

description: This FAIRsharing record describes:  BAM is the compressed binary version of the Sequence Alignment/Map (SAM) format, a compact and indexable representation of nucleotide sequence alignments. Many next-generation sequencing and analysis tools work with SAM/BAM. For custom track display, the main advantage of indexed BAM over PSL and other human-readable alignment formats is that only the portions of the files needed to display a particular region are transferred to UCSC. This makes it possible to display alignments from files that are so large that the connection to UCSC would time out when attempting to upload the whole file to UCSC. Both the BAM file and its associated index file remain on your web-accessible server (http, https, or ftp), not on the UCSC server. UCSC temporarily caches the accessed portions of the files to speed up interactive display.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.6f7m6j
title: FAIRsharing record for: Simulation Experiment Description Markup Language
title: SED-ML

description: This FAIRsharing record describes:  SED-ML is an XML-based format for encoding simulation setups, to ensure exchangeability and reproducibility of simulation experiments. It follows the requirements defined in the MIASE guidelines. SED-ML encodes in a computer-readable exchange format the information required by MIASE to enable reproduction of simulation experiments. It has been developed as a community project and it is defined in a detailed technical specification and additionally provides an XML schema.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.1rj558
title: FAIRsharing record for: Teleost Taxonomy Ontology
title: TTO

description: This FAIRsharing record describes:  This is an ontology of taxonomic terms (names of taxonomic groups) used in the systematics of fish, including non-teleost groups such as Chondrichthys (sharks and rays), Sarcopterygii (lungfish and coelacanths), lampreys, and hagfish.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.26dmba
title: FAIRsharing record for: mz Markup Language
title: mzML

description: This FAIRsharing record describes:  mzML was formed to amalgamate two formats for encoding raw spectrometer data; mzData developed by the PSI, and, mzXML developed at the Seattle Proteome Center at the Institute for Systems Biology. The PSI, with full participation by the ISB, developed the new format by taking the best aspects of each of the precursors to form a single, less confusing, format.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ay74mj
title: FAIRsharing record for: Symptom Ontology
title: SYMP

description: This FAIRsharing record describes:  The symptom ontology was designed around the guiding concept of a symptom being: "A perceived change in function, sensation or appearance reported by a patient indicative of a disease". There is a close relationship between Signs and Symptoms, where Signs are the objective observation of an illness. The Symptom Ontology will work to broaden its scope to capture and document in a more robust manor these two sets of terms. At times, the same term may be both a Sign and a Symptom.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.m3wzgs
title: FAIRsharing record for: Fly taxonomy
title: FBsp

description: This FAIRsharing record describes:  "Fly taxonomy" provides taxonomic information about the Fruit fly family (Drosophilidae). This information is a combination of NCBI TAXON data and from the following paper: Grimaldi, D.A."A phylogenetic, revised classification of Genera in the Drosophilidae (Diptera)" Bulletin of the American Museum of Natural History. New York: New York . American Museum of Natural History, 1990.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.b7z8by
title: FAIRsharing record for: Digital Imaging and COmmunications in Medicine
title: DICOM / ISO 12052:2017

description: This FAIRsharing record describes:  DICOM — Digital Imaging and Communications in Medicine — is the international standard for medical images and related information (ISO 12052:2017). It defines the formats for medical images that can be exchanged with the data and quality necessary for clinical use. DICOM is implemented in devices relating to radiology, cardiology imaging, dentistry and radiotherapy (X-ray, CT, MRI, ultrasound, etc.), and increasingly in devices in other medical enterprise imaging and research domains such as ophthalmology, dermatology and digital anatomical pathology (including whole slide imaging). 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ngv2xx
title: FAIRsharing record for: Apollo-SV
title: Apollo-SV

description: This FAIRsharing record describes:  Apollo-SV, developed as an OWL specification, defines the terms and relations necessary for interoperation between epidemic simulators and public health application software that interface with these simulators.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.zn05ta
title: FAIRsharing record for: Parkinson's Disease Ontology
title: PDON

description: This FAIRsharing record describes:  The Parkinson's Disease Ontology (PDO) was created to represent and model the Parkinson's Disease knowledge domain. This ontology with a covers major biomedical concepts from molecular to clinical features of the disease as well as the different views on disease features held by molecular biologists, clinicians and drug developers. This resource has been created for use in the IMI-funded AETIONOMY project (www.aetionomy.org).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.3mdt9n
title: FAIRsharing record for: Chemical Markup Language
title: CML

description: This FAIRsharing record describes:  CML (Chemical Markup Language) is an XML language designed to hold most of the central concepts in chemistry. It was the first language to be developed and plays the same role for chemistry as MathML for mathematics and GML for geographical systems. CML covers most mainstream chemistry and especially molecules, reactions, solid-state, computation and spectroscopy as well as a wide range of chemical properties, parameters and experimental observation. It is particularly concerned with the communication between machines and humans, and machines to machines.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ctqjor
title: FAIRsharing record for: Inist Periodic Table of the Elements Trilingual Thesaurus
title: null

description: This FAIRsharing record describes:  This trilingual thesaurus (French, English, Spanish) deals with the 118 chemical elements of the periodic table recognized by the IUPAC. It is aligned with ChEBI, wikidata, wikipedia, DBpedia.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.a1j1a7
title: FAIRsharing record for: Pre-eclampsia Ontology
title: PE-O

description: This FAIRsharing record describes:  The PEO incorporates a wide range of key concepts and terms of PE from clinical and biomedical research in structuring the knowledge base that is specific to PE.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.hfgman
title: FAIRsharing record for: .ACE format
title: .ACE format

description: This FAIRsharing record describes:  The ACE file format is a specification for storing data about genomic contigs. The original ACE format was developed for use with Consed, a program for viewing, editing, and finishing DNA sequence assemblies. ACE files are generated by various assembly programs, including Phrap, CAP3, Newbler, Arachne, AMOS (sequence assembly) (more specifically Minimo) and Tigr Assembler v2.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.zvrep1
title: FAIRsharing record for: Minimum Information about a MARKer gene Sequence : specimen
title: MIxS - MIMARKS-C

description: This FAIRsharing record describes:  MIxS - MIMARKS-SP (Minimum Information about a MARKer gene Sequence: specimen for marker gene sequences from cultured or voucher-identifiable specimens) is a checklist that is a part of the larger MIxS standard. MIxS, or the Minimum Information about any (X) Sequence, is a standard for describing the contextual information about the sampling and sequencing of any genomic sequence. Each checklist includes the required, recommended and optional metadata fields for a specific type of genomic sequence. This checklist concerns marker gene sequences from cultured or voucher-identifiable specimens.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.pvdrmz
title: FAIRsharing record for: Minimum Information About a Microarray Experiment involving Plants
title: MIAME/Plant

description: This FAIRsharing record describes:  MIAME/Plant is a standard describing which biological details should be captured for describing microarray experiments involving plants. Detailed information is required about biological aspects such as growth conditions, harvesting time or harvested organ(s).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.32b10v
title: FAIRsharing record for: Minimum Information About a Microarray Experiment
title: MIAME

description: This FAIRsharing record describes:  MIAME is intended to specify all the information necessary for an unambiguous interpretation of a microarray experiment, and potentially to reproduce it. MIAME defines the content but not the format for this information.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ca48xs
title: FAIRsharing record for: Minimal Information About a Phylogenetic Analysis Checklist
title: MIAPA checklist

description: This FAIRsharing record describes:  The MIAPA (Minimum Information About a Phylogenetic Analysis) checklist details the list of metadata necessary for researchers to evaluate or reuse a published phylogeny.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.