cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.34v89w
title: Occurrence Download

description: A dataset containing 9050 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Limenitis populi (Linnaeus, 1758)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 9050 records from 139 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018144-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18120/qp4w-av08
title: Tactile Edges and Motion
DOI: 10.15468/dl.xd3rbg
title: Occurrence Download

description: A dataset containing 2195 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Vitis rupestris Scheele)"
 ]
}

 The dataset includes 2195 records from 146 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018145-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13901085
title: Supporting data for manuscript "Impacts of Weak Sea Surface Temperature Warm Anomalies on Trade Wind Cloudiness in Large Eddy Simulations"

description: Processed LES data and scripts for reproducing figures in the manuscript.
DOI: 10.5281/zenodo.13901086
title: Supporting data for manuscript "Impacts of Weak Sea Surface Temperature Warm Anomalies on Trade Wind Cloudiness in Large Eddy Simulations"

description: Processed LES data and scripts for reproducing figures in the manuscript.
DOI: 10.15468/dl.yj7crk
title: Occurrence Download

description: A dataset containing 4893 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pierella Westwood, 1851"
 ]
}

 The dataset includes 4893 records from 110 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018147-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13937375
title: 2021 Pacific Northwest heatwave storyline analysis with NeuralGCM

description: This is the code and simulation results for our storyline analysis on 2021 Pacific Northwest heatwave using NeuralGCM and E3SM. 

NeuralHeatWave-main.zip: code to run NeuralGCM in both hindcast and PGW settings. 

E3SM-heat.zip: code and simulation results associated with E3SM. 

simulations.zip: selected variables from NeuralGCM ensembles.
DOI: 10.5281/zenodo.13937374
title: 2021 Pacific Northwest heatwave storyline analysis with NeuralGCM

description: This is the code and simulation results for our storyline analysis on 2021 Pacific Northwest heatwave using NeuralGCM and E3SM. 

NeuralHeatWave-main.zip: code to run NeuralGCM in both hindcast and PGW settings. 

E3SM-heat.zip: code and simulation results associated with E3SM. 

simulations.zip: selected variables from NeuralGCM ensembles.
DOI: 10.5281/zenodo.13941450
title: A spatial code for temporal information is necessary for efficient sensory learning

description: Here we provide a large dataset of neuronal responses in the mouse auditory system to a range of simple sounds. This data is initially published in the paper Bagur, Lebourg et al

The "Data" files are organized as follows : 



Data_XX.mat : one file with the responses all ROIs/units to all 140 sounds for each area. AC data was uploaded in two files with two halves of the neural data set due to file size limitations

Clusters_XX.mat : one file with the responses of the clustered ROIS from calcium imaging data go all 140 sounds

AnatInfo_AC/ICE.mat : localisation of each ROI from AC and ICE data

Correlation_Decoding.mat : the results of core analysis from the paper, to accelerate plotting using the "BasicCorrelationDecodingAnalysis.mlx" code


The "Codes" folder contains matlab code showing how to access the data and illustrating how it is organized as well as code to perform basic population level analysis from Bagur, Lebourg et al, illustrating how to calculate noise-free correlation between popultion vector

"Packages" are open source code from github written by other members of the scientific community and saved here as a reference :



AutoCell : https://github.com/thomasdeneux/Autocell

CortexLab suite : https://github.com/cortex-l

Phy : https://github.com/cortex-lab/phy

Network from Kell et al : https://github.com/mcdermottLab/kelletal2018
DOI: 10.5281/zenodo.13941449
title: A spatial code for temporal information is necessary for efficient sensory learning

description: Here we provide a large dataset of neuronal responses in the mouse auditory system to a range of simple sounds. This data is initially published in the paper Bagur, Lebourg et al

The "Data" files are organized as follows : 



Data_XX.mat : one file with the responses all ROIs/units to all 140 sounds for each area. AC data was uploaded in two files with two halves of the neural data set due to file size limitations

Clusters_XX.mat : one file with the responses of the clustered ROIS from calcium imaging data go all 140 sounds

AnatInfo_AC/ICE.mat : localisation of each ROI from AC and ICE data

Correlation_Decoding.mat : the results of core analysis from the paper, to accelerate plotting using the "BasicCorrelationDecodingAnalysis.mlx" code


The "Codes" folder contains matlab code showing how to access the data and illustrating how it is organized as well as code to perform basic population level analysis from Bagur, Lebourg et al, illustrating how to calculate noise-free correlation between popultion vector

"Packages" are open source code from github written by other members of the scientific community and saved here as a reference :



AutoCell : https://github.com/thomasdeneux/Autocell

CortexLab suite : https://github.com/cortex-l

Phy : https://github.com/cortex-lab/phy

Network from Kell et al : https://github.com/mcdermottLab/kelletal2018
DOI: 10.15468/dl.7updgb
title: Occurrence Download

description: A dataset containing 15112 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Melitaea diamina (Lang, 1789)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 15112 records from 207 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018146-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rsfkjx
title: Occurrence Download

description: A dataset containing 1973 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cithaerias Hübner, 1819"
 ]
}

 The dataset includes 1973 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018148-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vefhnq
title: Occurrence Download

description: A dataset containing 963 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Haetera Fabricius, 1807"
 ]
}

 The dataset includes 963 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018149-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13941390
title: Interactive heatmap: High-throughput behavioural phenotyping of 25 C. elegans disease models including patient-specific mutations

description: An interactive clustermap of behavioural tracking data for a panel of 25 C. elegans disease model phenologs (associated with our paper titled: High-throughput behavioural phenotyping of 25 C. elegans disease models including patient-specific mutations ). This is a static html file that can be opened in a browser and zoomed in for a detailed inspect of how the various strains differ from the control (N2). Mousing over the heatmap shows the name of features at each position so that a more intutive conclusion of the data, i.e., 'Strain A is slow' or 'Strain B is more curved', can be reached.
DOI: 10.5281/zenodo.13941389
title: Interactive heatmap: High-throughput behavioural phenotyping of 25 C. elegans disease models including patient-specific mutations

description: An interactive clustermap of behavioural tracking data for a panel of 25 C. elegans disease model phenologs (associated with our paper titled: High-throughput behavioural phenotyping of 25 C. elegans disease models including patient-specific mutations ). This is a static html file that can be opened in a browser and zoomed in for a detailed inspect of how the various strains differ from the control (N2). Mousing over the heatmap shows the name of features at each position so that a more intutive conclusion of the data, i.e., 'Strain A is slow' or 'Strain B is more curved', can be reached.
DOI: 10.57745/xl9dug
title: Stat_BNBV_LOIEAU_FRANCE_1970_2020_QA_Q5-1.tab

description: Estimation QA et QMNA5 simulés par la méthode LOIEAU aux exutoires des bassins versants de la BNBV.
DOI: 10.15468/dl.uq6aag
title: Occurrence Download

description: A dataset containing 1914 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Polyommatus semiargus (Rottemburg, 1775)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 1914 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018150-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13941369
title: GridION NA12878, 22RV1 and NB4 sequence dataset

description: Adaptive Nanopore PromethION multiplexed sample. 

NA12878 is Barcode 01.

NB4 is Barcode 02.

22Rv1 is Barcode 03.

BAM is aligned to HG38.p14.
DOI: 10.5281/zenodo.13941368
title: GridION NA12878, 22RV1 and NB4 sequence dataset

description: Adaptive Nanopore PromethION multiplexed sample. 

NA12878 is Barcode 01.

NB4 is Barcode 02.

22Rv1 is Barcode 03.

BAM is aligned to HG38.p14.
DOI: 10.57745/nku00h
title: Lettre_Avertissement_LOIEAU_Data_Inrae.pdf

description: Avertissement sur les données QA et QMNA5 mises à disposition.
DOI: 10.5066/p92gd1wl
title: Supporting data for low-flow statistics computed for streamflow gages and methods for estimating selected low-flow statistics for ungaged stream locations in Ohio, water years 1975–2020 (ver. 1.1, October 2024)

description: This data release comprises the tabular data used to develop regression equations for estimating selected low-flow statistics for ungaged streams in Ohio that are not substantially affected by regulation, diversions, or other anthropogenic influences, and the geographic information systems (GIS) layer to implement them in the U.S. Geological Survey StreamStats application (https://streamstats.usgs.gov).

A statewide recharge-based estimate of streamflow variability index (SVI) was used as an explanatory variable in developing many of the equations to estimate selected low-flow statistics at ungaged sites in Ohio and is included as part of this data release. Regressions, using SVI as the explanatory variable, were used to develop equations for predicting annual and seasonal minimum 1-, 7-, 30-, and 90-day mean flows with 10-year recurrence intervals, the harmonic mean flow, and the 80 percent duration flow. The resulting equations are presented in VonIns and Koltun (2024). To apply the equations to ungaged sites in Ohio, a raster (grid) of estimated streamflow variability index (SVI) for Ohio is included. The raster was developed using Environmental Systems Research Institute (ESRI) Spatial Analyst Software’s Empirical Bayesian kriging (EBK) geoprocessing function with at-gage computed SVIs used as the dependent variable and a recharge raster (grid) of estimated mean annual natural ground-water recharge (Wolock, 2003) as the explanatory variable. Other explanatory variables used to develop the equations and included in tabular form as part of this data release include decimal longitude and drainage area. A statewide coverage of decimal longitude and drainage area were not included as part of this data release because they are aleady available for ungaged streams within StreamStats.
DOI: 10.15468/dl.ux2stu
title: Occurrence Download

description: A dataset containing 517 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudohaetera Brown, 1942"
 ]
}

 The dataset includes 517 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018151-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27215775
title: Supplemental data forSignificant NO2 Formation in Truck Exhaust Plumes and Its Association with Ambient O3 Evidence from Extensive Plume-chasing Measurements.xlsx

description: The datasets include calculated NOx emission factors, NO2/NOx ratios, and corresponding ambient O3 concentrations measured at an isolated proving ground.
DOI: 10.6084/m9.figshare.27215775.v2
title: Supplemental data forSignificant NO2 Formation in Truck Exhaust Plumes and Its Association with Ambient O3 Evidence from Extensive Plume-chasing Measurements.xlsx

description: The datasets include calculated NOx emission factors, NO2/NOx ratios, and corresponding ambient O3 concentrations measured at an isolated proving ground.
DOI: 10.6084/m9.figshare.27215775.v1
title: Supplemental data forSignificant NO2 Formation in Truck Exhaust Plumes and Its Association with Ambient O3 Evidence from Extensive Plume-chasing Measurements.xlsx

description: The datasets include calculated NOx emission factors, NO2/NOx ratios, and corresponding O3 concentrations that were measured in an isolated proving ground.
DOI: 10.15468/dl.t8uwf4
title: Occurrence Download

description: A dataset containing 182579 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is one of (Rhinanthus minor L.)",
 "BasisOfRecord is one of (Human Observation, Observation, Occurrence evidence)",
 "Year is greater than or equal to 1901",
 "Year is less than or equal to 2019",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 182579 records from 762 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018137-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17880500
title: Postmining Landscapes Vereinigtes Schleenahin

description: Participant Observation around postmining landscapes of Vereinigtes Schleenhain, Groitzsch, Saxony, Germany Visual Anthropology, Policy plans
DOI: 10.5281/zenodo.17880499
title: Postmining Landscapes Vereinigtes Schleenahin

description: Participant Observation around postmining landscapes of Vereinigtes Schleenhain, Groitzsch, Saxony, Germany Visual Anthropology, Policy plans
DOI: 10.15468/dl.kz48rs
title: Occurrence Download

description: A dataset containing 440 records in GBIF matching the query:
SELECT
 kingdom,
 kingdomkey,
 phylum,
 phylumkey,
 class,
 classkey,
 "order",
 orderkey,
 family,
 familykey,
 genus,
 genuskey,
 species,
 specieskey,
 PRINTF('%04d-%02d-%02d', "year", "month", "day") yearmonthday,
 countrycode countrycode,
 IF(ISNULL(kingdomkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY kingdomkey, countrycode, PRINTF('%04d-%02d-%02d', "year", "month", "day"))) kingdomcount,
 IF(ISNULL(phylumkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY phylumkey, countrycode, PRINTF('%04d-%02d-%02d', "year", "month", "day"))) phylumcount,
 IF(ISNULL(classkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY classkey, countrycode, PRINTF('%04d-%02d-%02d', "year", "month", "day"))) classcount,
 IF(ISNULL(orderkey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY orderkey, countrycode, PRINTF('%04d-%02d-%02d', "year", "month", "day"))) ordercount,
 IF(ISNULL(familykey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY familykey, countrycode, PRINTF('%04d-%02d-%02d', "year", "month", "day"))) familycount,
 IF(ISNULL(genuskey), NULL, SUM(COUNT(*)) OVER (
 PARTITION BY genuskey, countrycode, PRINTF('%04d-%02d-%02d', "year", "month", "day"))) genuscount,
 COUNT(*) occurrences,
 MIN(GBIF_TEMPORALUNCERTAINTY(eventdate, eventtime)) mintemporaluncertainty,
 MIN(COALESCE(coordinateuncertaintyinmeters, 1000)) mincoordinateuncertaintyinmeters
FROM
 occurrence
WHERE
 occurrence.datasetkey = 'f7c09374-a733-4a02-b964-b9ae97894042'
 AND occurrence.occurrencestatus = 'PRESENT'
 AND occurrence.hasgeospatialissues = FALSE
 AND NOT GBIF_STRINGARRAYCONTAINS(occurrence.issue, 'TAXON_MATCH_FUZZY', TRUE)
 AND (occurrence.distancefromcentroidinmeters &gt;= 2000.0 OR occurrence.distancefromcentroidinmeters IS NULL)
 AND (occurrence.specieskey IS NOT NULL AND occurrence."year" IS NOT NULL AND occurrence."month" IS NOT NULL AND occurrence."day" IS NOT NULL AND occurrence.hascoordinate = TRUE)
GROUP BY
 occurrence.kingdom,
 occurrence.kingdomkey,
 occurrence.phylum,
 occurrence.phylumkey,
 occurrence.class,
 occurrence.classkey,
 occurrence."order",
 occurrence.orderkey,
 occurrence.family,
 occurrence.familykey,
 occurrence.genus,
 occurrence.genuskey,
 occurrence.species,
 occurrence.specieskey,
 PRINTF('%04d-%02d-%02d', "year", "month", "day"),
 occurrence.countrycode

 The dataset's 440 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053919-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jxxmfw
title: Occurrence Download

description: A dataset containing 477 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Vilerna rugulosa"
 ]
}

 The dataset includes 477 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053922-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17942430
title: Machine learning based prioritisation of genes associated with osteoarthritis joint damage in animals

description: Code (https://github.com/soulj/JointDamageGeneML/), data and results to accompany the paper:Machine learning based prioritisation of genes associated with osteoarthritis joint damage in animals
DOI: 10.5281/zenodo.17942429
title: Machine learning based prioritisation of genes associated with osteoarthritis joint damage in animals

description: Code (https://github.com/soulj/JointDamageGeneML/), data and results to accompany the paper:Machine learning based prioritisation of genes associated with osteoarthritis joint damage in animals
DOI: 10.15468/dl.zuz2pd
title: Occurrence Download

description: A dataset containing 622 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Europe",
 "Country is Czechia",
 "DatasetKey is one of (iNaturalist Research-grade Observations, Observation.org, Nature data from around the World)",
 "PublishingOrg is one of (28eb1a3f-1c15-4a95-931a-4af90ecb574d, c8d737e0-2ff8-42e8-b8fc-6b805d26fc5f)",
 "TaxonKey is one of (, Halyomorpha halys)",
 "Year 2010-2025"
 ]
}

 The dataset includes 622 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053921-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25934/pr00005589.2
title: Available IPD datapackage for study 'A Randomized, Double-Blind, Placebo-Controlled, Multicenter Phase III Trial of Bevacizumab, Temozolomide and Radiotherapy, Followed by Bevacizumab and Temozolomide Versus Placebo, Temozolomide and Radiotherapy Followed by Placebo and Temozolomide in Patients With Newly Diagnosed Glioblastoma'

description: This 2 arm study investigated the efficacy and safety of the addition of bevacizumab to the current standard of care (multimodality therapy of concurrent radiotherapy plus temozolomide followed by adjuvant temozolomide) as compared to the current standard of care alone. Participants were randomly assigned to either the bevacizumab (10 milligrams per kilogram (mg/kg) intravenously [IV] once every 2 week [q2w]) or the placebo arm, in combination with radiation therapy (total dose 60 Gray [Gy], administered as 2 Gy fractions, 5 days/week) plus temozolomide (75 milligrams per meter squared [mg/m^2] oral administration [po] daily) for 6 weeks. After a 4 week treatment break, participants continued to receive bevacizumab (10 mg/kg IV q2w) or placebo, plus temozolomide (150-200 mg/m^2 po daily on days 1-5 of each 4 week cycle) for 6 cycles of maintenance treatment or until disease progression or unacceptable toxicity, whichever occured first. Following the maintenance phase, bevacizumab (15 mg/kg iv every 3 weeks [q3w]) or placebo monotherapy continued. The time on study treatment was until disease progression.
DOI: 10.5281/zenodo.17941631
title: Consejerías preventiva en factores de riesgo para el cáncer HIS-MINSA 2022-2024

description: Registro administrativo de las atenciones en consejerías preventivas en factores de riesgo para cáncer en el HIS-MINSA Perú, en los años 2022, 2023 y 2024.
DOI: 10.5281/zenodo.17941632
title: Consejerías preventiva en factores de riesgo para el cáncer HIS-MINSA 2022-2024

description: Registro administrativo de las atenciones en consejerías preventivas en factores de riesgo para cáncer en el HIS-MINSA Perú, en los años 2022, 2023 y 2024.
DOI: 10.15468/dl.hqrr3c
title: Occurrence Download

description: A dataset containing 34450 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Europe",
 "Country is one of (France, Estonia, Finland, Norway, Austria, Poland, Ukraine, Latvia, Åland Islands)",
 "OccurrenceStatus is Present",
 "TaxonKey is Tetrao tetrix",
 "Year 2000-2025"
 ]
}

 The dataset includes 34450 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053923-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.