cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5074267.v1
title: Lack of ovarian skew in an allodapine bee and the evolution of casteless social behaviour

description: Facultatively social species exhibit varying degrees of reproductive skew that provide valuable insights into the possible evolutionary forces shaping the origins of obligate eusocial colony organisation, wherein the majority of individuals (workers) forgo direct reproduction. Here we report aspects of the nesting biology of a semi-arid population of the allodapine bee <i>Exoneurella setosa</i>, which forms social colonies that lack reproductive hierarchies and are therefore ‘casteless’; an intriguing discovery given that a congeneric eusocial species exhibits the greatest morphological distinction between queen and worker castes in the entire subfamily Xylocopinae (Apidae). <i>Exoneurella setosa</i> exhibited a modal colony size of two females per nest and we analysed nest-mate differentiation in ovarian development, body size and wing wear (a proxy for foraging activity). We then contrasted empirical results with Monte Carlo-simulated colonies to ascertain that multifemale nests lack evidence for reproductive skew. Our results suggest that nest-site limitation is a key driver for eusocial organisation within the Xylocopinae and that the absence of such environmental limitations, combined with minor benefits for group nesting, can select for casteless social organisation.
DOI: 10.6084/m9.figshare.5074201
title: Low-cost mobile air pollution monitoring in urban environments: a pilot study in Lubbock, Texas

description: The complex nature of air pollution in urban areas prevents traditional monitoring techniques from obtaining measurements representative of true human exposure. The current study assessed the capability of low-cost mobile monitors to acquire useful data in a city without a monitoring network in place (Lubbock, Texas) using a bicycle platform. The monitoring campaign resulted in 30 days of data along a 13.4 km fixed concentric route. Due to high sensitivities to airflow, the apparent wind velocity was accounted for throughout the route. The data were also normalized into percentiles in order to visualize spatial patterns. The highest estimated pollution levels were located near frequently busy intersections and roads; however, sensor issues resulted in lower confidence. Additional research is needed concerning the appropriate use of low-cost metal oxide sensors for citizen science applications, as measurements can be misleading if the user is unaware of sensors specifications. The simultaneous use of several low-cost mobile platforms, rather than a single platform, as well as the use of high-end cases, are recommended to create a more robust spatial analysis. The issues addressed from this research are important to understand for accurate and beneficial application of low-cost gaseous monitors for citizen science.
DOI: 10.6084/m9.figshare.5074201.v1
title: Low-cost mobile air pollution monitoring in urban environments: a pilot study in Lubbock, Texas

description: The complex nature of air pollution in urban areas prevents traditional monitoring techniques from obtaining measurements representative of true human exposure. The current study assessed the capability of low-cost mobile monitors to acquire useful data in a city without a monitoring network in place (Lubbock, Texas) using a bicycle platform. The monitoring campaign resulted in 30 days of data along a 13.4 km fixed concentric route. Due to high sensitivities to airflow, the apparent wind velocity was accounted for throughout the route. The data were also normalized into percentiles in order to visualize spatial patterns. The highest estimated pollution levels were located near frequently busy intersections and roads; however, sensor issues resulted in lower confidence. Additional research is needed concerning the appropriate use of low-cost metal oxide sensors for citizen science applications, as measurements can be misleading if the user is unaware of sensors specifications. The simultaneous use of several low-cost mobile platforms, rather than a single platform, as well as the use of high-end cases, are recommended to create a more robust spatial analysis. The issues addressed from this research are important to understand for accurate and beneficial application of low-cost gaseous monitors for citizen science.
DOI: 10.6084/m9.figshare.5074078
title: Master sheet V7.xlsx.gsheet

description: Database containing all studies using repeated sessions of tDCS spaced at least a day apart
DOI: 10.6084/m9.figshare.5074081
title: Content Recommendation through Semantic Annotation of User Reviews and Linked Data

description: Nowadays, most recommender systems exploit user-provided ratings to infer their preferences. However, the growing popularity of social and e-commerce websites has encouraged users to also share comments and opinions through textual reviews. In this paper, we introduce a new recommendation approach which exploits the semantic annotation of user reviews to extract useful and non-trivial information about the items to recommend. It also relies on the knowledge freely available in the Web of Data, notably in DBpedia and Wikidata, to discover other resources connected with the annotated entities. We evaluated our approach in three domains, using both DBpedia and Wikidata. The results showed that our solution provides a better ranking than another recommendation method based on the Web of Data, while it improves in novelty with respect to traditional techniques based on ratings. Additionally, our method achieved a better performance with Wikidata than DBpedia.
DOI: 10.6084/m9.figshare.5074069
title: 3D reconstruction of laser projective point with projection invariant generated from five points on 2D target

description: Data in Figures 4-8<br>
DOI: 10.6084/m9.figshare.5074069.v1
title: 3D reconstruction of laser projective point with projection invariant generated from five points on 2D target

description: Data in Figures 4-8<br>
DOI: 10.6084/m9.figshare.5074078.v1
title: Master sheet V7.xlsx.gsheet

description: Database containing all studies using repeated sessions of tDCS spaced at least a day apart
DOI: 10.6084/m9.figshare.5074039
title: Figure 6

description: Figure 6
DOI: 10.6084/m9.figshare.5074081.v1
title: SemRevRec Evaluation

description: Evaluation of the SemRevRec algorithm.<br>
DOI: 10.6084/m9.figshare.5074081.v2
title: SemRevRec Evaluation Results

description: Evaluation results of the SemRevRec algorithm.<br>
DOI: 10.6084/m9.figshare.5074081.v4
title: Content Recommendation through Semantic Annotation of User Reviews and Linked Data

description: Nowadays, most recommender systems exploit user-provided ratings to infer their preferences. However, the growing popularity of social and e-commerce websites has encouraged users to also share comments and opinions through textual reviews. In this paper, we introduce a new recommendation approach which exploits the semantic annotation of user reviews to extract useful and non-trivial information about the items to recommend. It also relies on the knowledge freely available in the Web of Data, notably in DBpedia and Wikidata, to discover other resources connected with the annotated entities. We evaluated our approach in three domains, using both DBpedia and Wikidata. The results showed that our solution provides a better ranking than another recommendation method based on the Web of Data, while it improves in novelty with respect to traditional techniques based on ratings. Additionally, our method achieved a better performance with Wikidata than DBpedia.
DOI: 10.6084/m9.figshare.5074081.v3
title: SemRevRec Evaluation

description: Nowadays, most recommender systems exploit user-provided ratings to infer their preferences. However, the growing popularity of social and e-commerce websites has encouraged users to also share comments and opinions through textual reviews. In this paper, we introduce a new recommendation approach which exploits the semantic annotation of user reviews to extract useful and non-trivial information about the items to recommend. It also relies on the knowledge freely available in the Web of Data, notably in DBpedia and Wikidata, to discover other resources connected with the annotated entities. We evaluated our approach in three domains, using both DBpedia and Wikidata. The results showed that our solution provides a better ranking than another recommendation method based on the Web of Data, while it improves in novelty with respect to traditional techniques based on ratings. Additionally, our method achieved a better performance with Wikidata than DBpedia.
DOI: 10.6084/m9.figshare.5073823
title: Figure 4

description: Figure 4
DOI: 10.6084/m9.figshare.5073823.v1
title: Figure 4

description: Figure 4
DOI: 10.5522/04/12768425
title: Impacts_temperatures_global yields_up_to_2012_code+data

description: This repository contains the code and the data required to estimate the models presented in the paper Agnolucci, Rapti, Alexander, De Lipsis, Holland, Eigenbrod and Ekins (2020) Impacts of rising temperatures and farm management practices on global yields of 18 crops.<br>There are two sets of datasets: <br><br>1. those named as Yield.RData are used in the estimation of the selected models in "1 FinalModels - NatureFood.R"<br>2. those named as .RData are used in the production of Figure 2 carried out in "2 Figure 2.R". These figures also use inputs stored in three Excel spreadsheets: 1) crop_inputs_v3.xlsx; 2) Crop_ME_Malnourishment.xlsx; 3) Crop_yield_ME.xlsx<br>
DOI: 10.21227/jv1v-hr98
title: data

description: Urban informatics and social geographic computing, spatial and temporal big data processing and spatial measurement, map service and natural language processing.
DOI: 10.21227/pp1p-sk75
title: data

description: Urban informatics and social geographic computing, spatial and temporal big data processing and spatial measurement, map service and natural language processing.
DOI: 10.6084/m9.figshare.5073703
title: Figure 5

description: Figure 5
DOI: 10.26165/juelich-data/rdwnfu/o9ga5l
title: vector_analyzing_power.csv

description: The file contains a comma separated list of angular bins and vector analyzing powers for all energies. The first two lines are comments.
DOI: 10.26165/juelich-data/rdwnfu
title: Replication Data for: Measurement of deuteron carbon vector analyzing powers in the kinetic energy range 170–380 MeV

description: This dataset contains the published vector analyzing powers as function of scattering angle and incident beam energy.
DOI: 10.6084/m9.figshare.5072680
title: Figure 7

description: Figure 7
DOI: 10.6084/m9.figshare.5072683
title: Update_Imura_et al_Perception of the average size of multiple objects in chimpanzees_data.xlsx

description: These raw data (+ supplemental data) are the results of study of "Perception of the average size of multiple object in chimpanzees (<i>Pan troglodytes</i>)".
DOI: 10.6084/m9.figshare.5072683.v1
title: Update_Imura_et al_Perception of the average size of multiple objects in chimpanzees_data.xlsx

description: These raw data (+ supplemental data) are the results of study of "Perception of the average size of multiple object in chimpanzees (<i>Pan troglodytes</i>)".
DOI: 10.6084/m9.figshare.5072422
title: Stereotype Threat as a Psychological Feature of Work-Life Conflict

description: These studies examine stereotype threat based on family caregiving responsibilities and work-life conflict.
DOI: 10.6084/m9.figshare.5072329
title: Data from: Wariness of reef fish to passive diver presence with varying dive gear type across a coral reef depth gradient.

description: Raw data from:Andradi-Brown et al. (2017) Wariness of reef fish to passive diver presence with varying dive gear type across a coral reef depth gradient. <i>Journal of the Marine Biological Association of the United Kingdom</i><i><br></i>DOI: https://doi.org/10.1017/S0025315417001278
DOI: 10.6084/m9.figshare.5072329.v1
title: Data from: Wariness of reef fish to passive diver presence with varying dive gear type across a coral reef depth gradient.

description: Raw data from:Andradi-Brown et al. (2017) Wariness of reef fish to passive diver presence with varying dive gear type across a coral reef depth gradient. <i>Journal of the Marine Biological Association of the United Kingdom</i><i><br></i>DOI: https://doi.org/10.1017/S0025315417001278
DOI: 10.6084/m9.figshare.5072182
title: Analisis de Rquerimientos del manual de Usuarios del Sistema de informacion Soporte para las investigaciones sobre enfermedades tropicales

description: <i>In the following document exposed the analysis results quality of the software "information system support for research on tropical diseases carried out by the research group CIMET of the Magdalena University." From the perspective of software engineering in order to comparing whether or not it meets the minimum standards required in managing software quality and its subsequent implementation.</i> <i>Proposals for improvements to the software are also presented.</i>
DOI: 10.6084/m9.figshare.5072179
title: Figure 8

description: Figure 8
DOI: 10.6084/m9.figshare.5072143
title: Data for: Concordant divergence of mitogenomes and a mitonuclear gene cluster in bird lineages inhabiting different climates

description: Accompanying datasets for:Morales et al. (submitted), Concordant divergence of mitogenomes and a mitonuclear gene cluster in bird lineages inhabiting different climates<br>The preprint of this article can be found in doi: https://doi.org/10.1101/095596<br>This data set includes:(1) a table with information for every individual with DArT genotypes(2) a table with information for every individual sequenced for the mitochondrial gene ND2<br>(3) unfiltered SNP dataset with 97,070 SNP markers(4) BLAST results for DArT tags against the zebra finch and collared flycatcher reference genomes.
DOI: 10.6084/m9.figshare.5072182.v1
title: Analisis de Rquerimientos del manual de Usuarios del Sistema de informacion Soporte para las investigaciones sobre enfermedades tropicales

description: <i>In the following document exposed the analysis results quality of the software "information system support for research on tropical diseases carried out by the research group CIMET of the Magdalena University." From the perspective of software engineering in order to comparing whether or not it meets the minimum standards required in managing software quality and its subsequent implementation.</i> <i>Proposals for improvements to the software are also presented.</i>
DOI: 10.6084/m9.figshare.5072143.v1
title: Data for: Concordant divergence of mitogenomes and a mitonuclear gene cluster in bird lineages inhabiting different climates

description: Accompanying datasets for:Morales et al. (submitted), Concordant divergence of mitogenomes and a mitonuclear gene cluster in bird lineages inhabiting different climates<br>The preprint of this article can be found in doi: https://doi.org/10.1101/095596<br>This data set includes:(1) a table with information for every individual with DArT genotypes(2) a table with information for every individual sequenced for the mitochondrial gene ND2<br>(3) unfiltered SNP dataset with 97,070 SNP markers(4) BLAST results for DArT tags against the zebra finch and collared flycatcher reference genomes.
DOI: 10.6084/m9.figshare.5071855
title: Single cell data and tools

description: Scripts for population and single-cell RNA-seq analysis of subiculum.
DOI: 10.6084/m9.figshare.5071855.v2
title: Single cell data and tools

description: Contains alignment, quantification, and analysis scripts.
DOI: 10.6084/m9.figshare.5071855.v3
title: Single cell data and tools

description: Scripts for population and single-cell RNA-seq analysis of subiculum.
DOI: 10.6084/m9.figshare.5071747
title: EVDT Calibration

description: The data indicates reult from experiments conducted in the Nigerian savannas to generate cultivar coefficients for the varieties EVDT2009 and TZEEWSTR. The dataset includes the observed and simulated values.<br>
DOI: 10.6084/m9.figshare.5071747.v1
title: EVDT Calibration

description: The data indicates reult from experiments conducted in the Nigerian savannas to generate cultivar coefficients for the varieties EVDT2009 and TZEEWSTR. The dataset includes the observed and simulated values.<br>
DOI: 10.6084/m9.figshare.5071708
title: Raw Data Plos One.docx

description: Raw data used for the preparation of a manuscript entitled "Relationship between microRNA-146a expression and plasma renalase levels in hemodialyzed patients", which is published in the Plos One journal <br>
DOI: 10.6084/m9.figshare.5071705
title: Synthesis of a Luminescent Dithiazoloarsole Building Block and 2 Comparison to Its Phosphole Analogue

description: Data related to figures in "Synthesis of a Luminescent Dithiazoloarsole Building Block and 2 Comparison to Its Phosphole Analogue" that is not provided in the Supporting Information.
DOI: 10.6084/m9.figshare.5071708.v1
title: Raw Data Plos One.docx

description: Raw data used for the preparation of a manuscript entitled "Relationship between microRNA-146a expression and plasma renalase levels in hemodialyzed patients", which is published in the Plos One journal <br>
DOI: 10.6084/m9.figshare.5071684
title: Data table

description: The table includes: ID, Sex, Age, Height, Weight, BMI, Regular physical activity, Smoking, Habitual Drinking, SF8, BIS-11(Barrat impulsiveness scale), PHQ-9, PSQI-J, Rice intake frequency, Bread intake frequency, Noodle intake frequency, adjusted values of BDHQ
DOI: 10.6084/m9.figshare.5071705.v1
title: Synthesis of a Luminescent Dithiazoloarsole Building Block and 2 Comparison to Its Phosphole Analogue

description: Data related to figures in "Synthesis of a Luminescent Dithiazoloarsole Building Block and 2 Comparison to Its Phosphole Analogue" that is not provided in the Supporting Information.
DOI: 10.6084/m9.figshare.5071567
title: Inflammatory and vascular placental lesions are associated with neonatal amplitude integrated EEG recording in early premature neonates

description: Raw data for correlating neonatal clinical and neurophysiological data to placental pathologies in infants born prematurely
DOI: 10.6084/m9.figshare.5071567.v1
title: Inflammatory and vascular placental lesions are associated with neonatal amplitude integrated EEG recording in early premature neonates

description: Raw data for correlating neonatal clinical and neurophysiological data to placental pathologies in infants born prematurely
DOI: 10.6084/m9.figshare.5071288
title: Cell Differentiation Processes as Spatial Networks: identifying four-dimensional structure in embryogenesis

description: There are two basic forms of animal development: mosaic (as found in roundworms and sea squirts) and regulative (as found in amphibians and mammals). How might one distinguish between each type of development? Using a four-dimensional spatial representation (<i>x,y,z,t</i>), major features of the developmental process are revealed. To establish the role of mosaic mechanisms, we can map the cell division process to a computational representation of <i>C. elegans</i> embryogenesis using a directed, acyclic graph (DAG) and a differentiation code. Mosaic development is identifiable by observing spatial localization of progenitor and descendent cells. This three-dimensional compartmentalization should be consistent with nesting in the cell lineage tree. Regulative development should demonstrate spatial “smearing”, or deviations from the compartmentalization of the mosaic process. In a complementary manner, complex network statistics should confirm this by providing an approximation of embryo geometry. Characterizing the spatial organization and geometry of embryos in this way allows for heuristic indicators of developmental patterns both within and between organisms.<br>All raw data used in this study are available at Github. <br>Lineage Tree Raw Data: https://github.com/balicea/DevoWorm/tree/master/Lineage Tree DB, Differentiation Tree<br>Raw Data: https://github.com/balicea/DevoWorm/tree/master/Differentiation Tree Dataset. <br>All processed data (used in the analyses) are available from the Open Science Framework: https://osf.io/q9jvb/
DOI: 10.6084/m9.figshare.5067727
title: Synthesis of two closely spaced cysteine barbiturates containing peptides by copper-catalyzed oxidation of contryphan disulfide

description: In this report, we are documenting the synthesis of peptide barbiturate through copper-catalyzed oxidation of peptide disulfide. Single disulfide-containing contryphans are used as models to access possibility of anchoring of barbituric acid (BRB) onto the peptide disulfide. Current method permits anchoring of two molecules of BRB onto the polypeptide and yield of peptide barbiturates varies from 59 to 84%. Formation of cysteine sulfenic acid (Cys-SOH) during oxidation of disulfide was confirmed using chemical probe of Cys-SOH dimedone. Mass spectrometric studies have confirmed the presence of cysteine barbiturate in anchored peptides. Based on the nature of reactive oxygen species involved in oxidation of peptide disulfide, possible mechanisms were proposed for anchoring of BRB onto the peptide disulfide through Cys-SOH. This is the first report on anchoring of two molecules of BRB onto the closely spaced cysteine residues of single polypeptide.
DOI: 10.6084/m9.figshare.5067742
title: Calcium Dobesilate Prevents Neurodegeneration and Vascular Leakage in Experimental Diabetes

description: <i>Purpose</i>: The mechanisms involved in the reported beneficial effects of Calcium dobesilate monohydrate (CaD) for the treatment of diabetic retinopathy (DR) remain to be elucidated. The main aim of the present study is to examine whether CaD prevents early events in the pathogenesis of DR such as neurodegeneration and vascular leakage. In addition, putative mediators of both neurodegeneration (glutamate/GLAST, ET-1/ETB receptor) and early microvascular impairment (ET-1/ETA receptor, oxidative stress, VEGF, and the PKC-delta-p38 MAPK pathway) have been examined. <i>Methods</i>: Diabetic (db/db) mice were randomly assigned to daily oral treatment with CaD (200 mg/Kg/day) (<i>n</i> = 12) or vehicle (<i>n</i> = 12) for 14 days. In addition, 12 non-diabetic (db/+) mice matched by age were used as the control group. Functional abnormalities were assessed by electroretinography. Neurodegeneration and microvascular abnormalities were evaluated by immunohistochemistry and Western blot. Glutamate was determined by HPLC. <i>Results</i>: CaD significantly decreased glial activation and apoptosis and produced a significant improvement in the electroretinogram parameters. Mechanistically, CaD prevented the diabetes-induced up-regulation of ET-1 and its cognate receptors (ETA-R and ETB-R), which are involved in microvascular impairment and neurodegeneration, respectively. In addition, treatment with CaD downregulated GLAST, the main glutamate transporter, and accordingly prevented the increase in glutamate. Finally, CaD prevented oxidative stress, and the upregulation of VEGF and PKC delta-p38 MAPK pathway induced by diabetes, thus resulting in a significant reduction in vascular leakage. <i>Conclusions</i>: Our findings demonstrate for the first time that CaD exerts neuroprotection in an experimental model of DR. In addition, we provide first evidence that CaD prevents the overexpression of ET-1 and its receptors in the diabetic retina. These beneficial effects on the neurovascular unit could pave the way for clinical trials addressed to confirm the effectiveness of CaD in very early stages of DR.
DOI: 10.6084/m9.figshare.5067724
title: sept_tool_analyzers_20170602.txt

description: Documents the 59 different software engineering research paper analysers and the summary tags they contribute for a research paper in submission. Each row has the name of an analysers/extractor followed by the tags it contributes evidence to.