cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11853873
title: Additional file 1 of High-throughput quantification of protein structural change reveals potential mechanisms of temperature adaptation in Mytilus mussels

description: Additional file 1: Figure S1. All unique proteins QMEAN &gt;-5 M. galloprovincialis. Figure S2. All unique proteins QMEAN &gt;-5 M. trossulus. Figure S3. All unique orthologs QMEAN &gt;-5. Figure S4. Over-representation of M. galloprovincialis protein ontologies. Figure S5. Spearman rank correlation between the number of hydrogen bonds and salt bridges per amino acid among Mytilus proteins. Figure S6. Amino acid composition all unique proteins M. galloprovincialis. Figure S7. Amino acid composition all unique proteins M. trossulus. Figure S8. Chi square tests of independence comparing amino acid use in different sets of Mytilus proteins. Figure S9. Spearman rank order correlation between residue hydrophobicity or residue volume and deviation in amino acid use in M. galloprovincialis relative to M. trossulus for different sets of proteins.
DOI: 10.6084/m9.figshare.11853873.v1
title: Additional file 1 of High-throughput quantification of protein structural change reveals potential mechanisms of temperature adaptation in Mytilus mussels

description: Additional file 1: Figure S1. All unique proteins QMEAN &gt;-5 M. galloprovincialis. Figure S2. All unique proteins QMEAN &gt;-5 M. trossulus. Figure S3. All unique orthologs QMEAN &gt;-5. Figure S4. Over-representation of M. galloprovincialis protein ontologies. Figure S5. Spearman rank correlation between the number of hydrogen bonds and salt bridges per amino acid among Mytilus proteins. Figure S6. Amino acid composition all unique proteins M. galloprovincialis. Figure S7. Amino acid composition all unique proteins M. trossulus. Figure S8. Chi square tests of independence comparing amino acid use in different sets of Mytilus proteins. Figure S9. Spearman rank order correlation between residue hydrophobicity or residue volume and deviation in amino acid use in M. galloprovincialis relative to M. trossulus for different sets of proteins.
DOI: 10.6084/m9.figshare.11853813
title: Additional file 2 of Molecular bases for drought tolerance in common vetch: designing new molecular breeding tools

description: Additional file 2 Dataset S2. Excel tables containing information of DEG in different experimental conditions as indicated (drought versus control, and tolerant versus sensitive variants in both conditions) and statistical analysis of functional enrichment in categories: GO, KEGG, Pfam and GOG terms. https://drive.google.com/open?id=1WnnFJTsmCVBGFvevDgQCOki7z0dz1e8l
DOI: 10.6084/m9.figshare.11853813.v1
title: Additional file 2 of Molecular bases for drought tolerance in common vetch: designing new molecular breeding tools

description: Additional file 2 Dataset S2. Excel tables containing information of DEG in different experimental conditions as indicated (drought versus control, and tolerant versus sensitive variants in both conditions) and statistical analysis of functional enrichment in categories: GO, KEGG, Pfam and GOG terms. https://drive.google.com/open?id=1WnnFJTsmCVBGFvevDgQCOki7z0dz1e8l
DOI: 10.6084/m9.figshare.11853801
title: Additional file 1 of Molecular bases for drought tolerance in common vetch: designing new molecular breeding tools

description: Additional file 1: Dataset S1. Excel tables with V. sativa Uniprot annotation and functional classification assignment of the assembled unigenes and in GO, KEGG, Pfam and GOG terms. https://drive.google.com/open?id=153IX8pv-CxL6G4SDoKjP17WQ26FMeY9x
DOI: 10.6084/m9.figshare.11853801.v1
title: Additional file 1 of Molecular bases for drought tolerance in common vetch: designing new molecular breeding tools

description: Additional file 1: Dataset S1. Excel tables with V. sativa Uniprot annotation and functional classification assignment of the assembled unigenes and in GO, KEGG, Pfam and GOG terms. https://drive.google.com/open?id=153IX8pv-CxL6G4SDoKjP17WQ26FMeY9x
DOI: 10.6084/m9.figshare.11853783
title: Additional file 1 of Faecal calprotectin is the biomarker that best distinguishes remission from different degrees of endoscopic activity in Crohn’s disease

description: Additional file 1: Supplementary material: Clincial, laboratorial and endoscopic data.
DOI: 10.6084/m9.figshare.11853783.v1
title: Additional file 1 of Faecal calprotectin is the biomarker that best distinguishes remission from different degrees of endoscopic activity in Crohn’s disease

description: Additional file 1: Supplementary material: Clincial, laboratorial and endoscopic data.
DOI: 10.6084/m9.figshare.11853774
title: Additional file 9 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 9 Table S2. Promoter analysis of the grapevine BBX gene family.
DOI: 10.6084/m9.figshare.11853774.v1
title: Additional file 9 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 9 Table S2. Promoter analysis of the grapevine BBX gene family.
DOI: 10.6084/m9.figshare.11853708
title: Additional file 17 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 17 Table S8. The primers sequences of VvBBX genes for qRT-PCR and gene amplification.
DOI: 10.6084/m9.figshare.11853699
title: Additional file 16 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 16 Table S7. Protein interaction network of grapevine VvBBX18 and VvBBX19 by STRING.
DOI: 10.6084/m9.figshare.11853708.v1
title: Additional file 17 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 17 Table S8. The primers sequences of VvBBX genes for qRT-PCR and gene amplification.
DOI: 10.6084/m9.figshare.11853699.v1
title: Additional file 16 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 16 Table S7. Protein interaction network of grapevine VvBBX18 and VvBBX19 by STRING.
DOI: 10.6084/m9.figshare.11853678
title: Additional file 13 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 13 Table S6. Expression profiles of the VvBBX genes in response to abiotic stress.
DOI: 10.6084/m9.figshare.11853675
title: Additional file 3 of Determining the optimal time for liberation from renal replacement therapy in critically ill patients: a systematic review and meta-analysis (DOnE RRT)

description: Additional file 3. Risk of Bias Assessment. Complete numerical breakdown of.
DOI: 10.6084/m9.figshare.11853678.v1
title: Additional file 13 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 13 Table S6. Expression profiles of the VvBBX genes in response to abiotic stress.
DOI: 10.6084/m9.figshare.11853675.v1
title: Additional file 3 of Determining the optimal time for liberation from renal replacement therapy in critically ill patients: a systematic review and meta-analysis (DOnE RRT)

description: Additional file 3. Risk of Bias Assessment. Complete numerical breakdown of.
DOI: 10.6084/m9.figshare.11853669
title: Additional file 9 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 9: File S2. Lists of TF-target interactions in Deletion data.
DOI: 10.6084/m9.figshare.11853672
title: Additional file 12 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 12 Table S5. Expression profiles of the VvBBX genes in response to GA3 and CPPU treatment.
DOI: 10.6084/m9.figshare.11853663
title: Additional file 11 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 11 Table S4. Expression profiles of the grapevine VvBBX genes during three fruit developmental stages.
DOI: 10.6084/m9.figshare.11853669.v1
title: Additional file 9 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 9: File S2. Lists of TF-target interactions in Deletion data.
DOI: 10.6084/m9.figshare.11853672.v1
title: Additional file 12 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 12 Table S5. Expression profiles of the VvBBX genes in response to GA3 and CPPU treatment.
DOI: 10.6084/m9.figshare.11853660
title: Additional file 8 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 8: File S1.Â Lists of TF-target interactions in CHiP Data.
DOI: 10.6084/m9.figshare.11853663.v1
title: Additional file 11 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 11 Table S4. Expression profiles of the grapevine VvBBX genes during three fruit developmental stages.
DOI: 10.6084/m9.figshare.11853654
title: Additional file 10 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 10 Table S3. Expression profiles of the grapevine VvBBX genes in different organs, tissues and developmental stages.
DOI: 10.6084/m9.figshare.11853660.v1
title: Additional file 8 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 8: File S1.Â Lists of TF-target interactions in CHiP Data.
DOI: 10.6084/m9.figshare.11853648
title: Additional file 6 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 6: TableS6. Enrichment of GO terms in TFs important to phase of cell-cycle expression in ChIP.
DOI: 10.6084/m9.figshare.11853651
title: Additional file 7 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 7: Table S7. Cell-cycle phase of S. cerevisiae genes.
DOI: 10.6084/m9.figshare.11853648.v1
title: Additional file 6 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 6: TableS6. Enrichment of GO terms in TFs important to phase of cell-cycle expression in ChIP.
DOI: 10.6084/m9.figshare.11853654.v1
title: Additional file 10 of Genome-wide identification and analysis of B-BOX gene family in grapevine reveal its potential functions in berry development

description: Additional file 10 Table S3. Expression profiles of the grapevine VvBBX genes in different organs, tissues and developmental stages.
DOI: 10.6084/m9.figshare.11853639
title: Additional file 3 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 3: Table S3. AUR-ROC of ChIP TF-target interaction models on genes covered by ChIP FFLs.
DOI: 10.6084/m9.figshare.11853642
title: Additional file 4 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 4: Table S4. Number of features in combined ChIP and Deletion models.
DOI: 10.6084/m9.figshare.11853639.v1
title: Additional file 3 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 3: Table S3. AUR-ROC of ChIP TF-target interaction models on genes covered by ChIP FFLs.
DOI: 10.6084/m9.figshare.11853642.v1
title: Additional file 4 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 4: Table S4. Number of features in combined ChIP and Deletion models.
DOI: 10.6084/m9.figshare.11853645
title: Additional file 5 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 5: TableS5. Importance of all TFs to the recovery of different phases of expression in ChIP and Deletion data sets.
DOI: 10.6084/m9.figshare.11853633
title: Additional file 1 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 1: TableS1. TF-target feature counts and target gene coverage by data set.
DOI: 10.6084/m9.figshare.11853645.v1
title: Additional file 5 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 5: TableS5. Importance of all TFs to the recovery of different phases of expression in ChIP and Deletion data sets.
DOI: 10.6084/m9.figshare.11853630
title: Additional file 12 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 12: File S5. Lists of TF-target interactions in PBM data.
DOI: 10.6084/m9.figshare.11853636
title: Additional file 2 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 2: TableS2. FFL feature counts and target gene coverage by data set.
DOI: 10.6084/m9.figshare.11853630.v1
title: Additional file 12 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 12: File S5. Lists of TF-target interactions in PBM data.
DOI: 10.6084/m9.figshare.11853633.v1
title: Additional file 1 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 1: TableS1. TF-target feature counts and target gene coverage by data set.
DOI: 10.6084/m9.figshare.11853636.v1
title: Additional file 2 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 2: TableS2. FFL feature counts and target gene coverage by data set.
DOI: 10.6084/m9.figshare.11853621
title: Additional file 10 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 10: File S3. Lists of TF-target interactions in All PWM data.
DOI: 10.6084/m9.figshare.11853621.v1
title: Additional file 10 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 10: File S3. Lists of TF-target interactions in All PWM data.
DOI: 10.6084/m9.figshare.11853627
title: Additional file 11 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 11: File S4. Lists of TF-target interactions in Expert PWM data.
DOI: 10.6084/m9.figshare.11853627.v1
title: Additional file 11 of Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data

description: Additional file 11: File S4. Lists of TF-target interactions in Expert PWM data.
DOI: 10.6084/m9.figshare.11853576
title: Screening for hypertension at the hairdresser: a feasibility study in France and Morocco

description: <b>Purpose:</b> Worldwide, hypertension awareness remains largely insufficient. This is particularly true in some population subgroups with a low socioeconomic status or in young adults who have limited interactions with healthcare systems. Performing Blood Pressure (BP) screening in non-conventional settings, such as in barbershops, has been suggested by a number of American authors. Whether this approach is feasible in Europe or in North Africa has not been evaluated, however. We, therefore, undertook a study to assess the value of BP screening at hairdressers in France and in Morocco. <b>Materials and Methods:</b> This was a prospective multicenter feasibility study. Twenty-three hairdressers in France and six in Morocco participated in the study. After being provided the relevant information, all consenting customers aged over 18 years were included. Three BP measurements were performed by the customers themselves using a validated Omron M7 automatic BP device connected to a printer. <b>Results:</b> In France, 1025 subjects were enrolled, while 300 subjects participated in Morocco. Three hundred and seventy French participants (36%) had an elevated BP. Among the subjects claiming to be normotensive or who did not know their hypertension status, 31.7% had a BP ≥ 135/85 mmHg. Only 42% of the subjects with an elevated BP contacted their physician within 3 months, although hypertension was confirmed in ¾ of them. In Morocco, the participants were older, with only 11.7% of the subjects aged &lt;50 years. They more frequently had unknown elevated BP values (71.9%). The rate of BP monitoring in known hypertensive individuals was 42.7% in France and 17.1% in Morocco. The procedure was very well accepted and considered to be useful in both countries. <b>Conclusion:</b> BP screening at hairdressers is feasible and well-accepted, although it does suffer somewhat from a relatively low efficacy.
DOI: 10.6084/m9.figshare.11853576.v1
title: Screening for hypertension at the hairdresser: a feasibility study in France and Morocco

description: <b>Purpose:</b> Worldwide, hypertension awareness remains largely insufficient. This is particularly true in some population subgroups with a low socioeconomic status or in young adults who have limited interactions with healthcare systems. Performing Blood Pressure (BP) screening in non-conventional settings, such as in barbershops, has been suggested by a number of American authors. Whether this approach is feasible in Europe or in North Africa has not been evaluated, however. We, therefore, undertook a study to assess the value of BP screening at hairdressers in France and in Morocco. <b>Materials and Methods:</b> This was a prospective multicenter feasibility study. Twenty-three hairdressers in France and six in Morocco participated in the study. After being provided the relevant information, all consenting customers aged over 18 years were included. Three BP measurements were performed by the customers themselves using a validated Omron M7 automatic BP device connected to a printer. <b>Results:</b> In France, 1025 subjects were enrolled, while 300 subjects participated in Morocco. Three hundred and seventy French participants (36%) had an elevated BP. Among the subjects claiming to be normotensive or who did not know their hypertension status, 31.7% had a BP ≥ 135/85 mmHg. Only 42% of the subjects with an elevated BP contacted their physician within 3 months, although hypertension was confirmed in ¾ of them. In Morocco, the participants were older, with only 11.7% of the subjects aged &lt;50 years. They more frequently had unknown elevated BP values (71.9%). The rate of BP monitoring in known hypertensive individuals was 42.7% in France and 17.1% in Morocco. The procedure was very well accepted and considered to be useful in both countries. <b>Conclusion:</b> BP screening at hairdressers is feasible and well-accepted, although it does suffer somewhat from a relatively low efficacy.
DOI: 10.6084/m9.figshare.11853492
title: Vanadium complexes derived from fluoro-substituted Schiff bases: Synthesis, crystal structures, and antimicrobial activity

description: Two new vanadium complexes, [VO(L<sup>1</sup>)<sub>2</sub>] (<b>1</b>) and [V<sub>2</sub>O<sub>2</sub>(μ-O)<sub>2</sub>(L<sup>2</sup>)<sub>2</sub>] (<b>2</b>), where L<sup>1</sup> is 2-(cyclohexyliminimethyl)-4,6-difluorophenolate, L<sup>2</sup> is 2,4-difluoro-6-[(2-isopropylaminoethylimino)methyl]phenolate, have been synthesized and characterized by elemental analysis, FT-IR and UV-Vis spectra, and single crystal X-ray determination. The V atom in complex <b>1</b> is in a coordination between trigonal bipyramidal and square pyramidal, and that in complex <b>2</b> is in octahedral coordination. The antibacterial activity of the compounds against various bacteria was assayed. The fluoro-substituted groups play an essential role in the biological process.
DOI: 10.6084/m9.figshare.11853477
title: Elevated CEA and CA19-9 serum levels independently predict advanced pancreatic cancer at diagnosis

description: <b>Purpose:</b> It is suggested that tumour markers carcinoembryonic antigen (CEA) and carbohydrate antigen 19-9 (CA19-9) could be used to predict the stage of pancreatic cancer. However, optimal cut-off values for CEA and CA19-9 are disputable. This study aimed to assess the value of CEA and CA19-9 serum levels at diagnosis of pancreatic ductal adenocarcinoma (PDAC) as predictors for the advanced stage of PDAC in patients discussed at pancreatic multidisciplinary team (MDT) meetings. <b>Methods:</b> Patients with suspected PDAC discussed at MDT meetings from 2013 to 2017 were reviewed, in order to determine optimal cut-off values of both CEA and CA19-9. <b>Results:</b> In total, 375 patients were included. Optimal cut-off values for predicting advanced PDAC were 7.0 ng/ml for CEA and 305.0 U/ml for CA19-9, resulting in positive predictive values of 83.3%, 73.6%, and 91.4% for CEA, CA19-9 and combined, respectively. Both tumour markers were independent predictors of advanced PDAC, demonstrated by an odds ratio of 4.21 (95% CI:1.85–9.56; <i>p</i> = 0.001) for CEA and 2.58 for CA19-9 (95% CI:1.30–5.14; <i>p</i> = 0.007). <b>Conclusions:</b> CEA appears to be a more robust predictor of advanced PDAC than CA19-9. Implementing CEA and CA19-9 serum levels during MDT meetings as an additional tool for establishing tumour resectability is worthwhile for tailored diagnostics.
DOI: 10.6084/m9.figshare.11853492.v1
title: Vanadium complexes derived from fluoro-substituted Schiff bases: Synthesis, crystal structures, and antimicrobial activity

description: Two new vanadium complexes, [VO(L<sup>1</sup>)<sub>2</sub>] (<b>1</b>) and [V<sub>2</sub>O<sub>2</sub>(μ-O)<sub>2</sub>(L<sup>2</sup>)<sub>2</sub>] (<b>2</b>), where L<sup>1</sup> is 2-(cyclohexyliminimethyl)-4,6-difluorophenolate, L<sup>2</sup> is 2,4-difluoro-6-[(2-isopropylaminoethylimino)methyl]phenolate, have been synthesized and characterized by elemental analysis, FT-IR and UV-Vis spectra, and single crystal X-ray determination. The V atom in complex <b>1</b> is in a coordination between trigonal bipyramidal and square pyramidal, and that in complex <b>2</b> is in octahedral coordination. The antibacterial activity of the compounds against various bacteria was assayed. The fluoro-substituted groups play an essential role in the biological process.