cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57745/d7hc3o
title: Experimental (n, n' γ) and (n, 2n γ) cross sections for 183W

description: This package publishes a series of (n, n' γ) and (n, 2n γ) cross sections for the isotope 183W. The data has been recorded at the Gelina neutron beam facility (JRC-Geel, Belgium), using an isotopically enriched (80.9%) target. The analysis was performed using a total Monte Carlo method to produce uncertainties and covariance matrices (included in the dataset).
DOI: 10.57745/fmdywi
title: Wheat Crop Ontology OWL/SKOS

description: The Wheat Ontology compiles phenotypic traits used in multi-trial evaluation of varieties. See further details at https://github.com/Wimmics/WheatObservationsKG/tree/main/co321.
DOI: 10.57745/g8pxej
title: Grapevine breeding programs and selection index - script and data

description: Grapevine (Vitis vinifera) breeding reaches a critical point. New cultivars are released every year with resistance to powdery and downy mildews. However, the traditional process remains time-consuming, taking 20 to 25 years, and demands the evaluation of new traits to enhance grapevine adaptation to climate change. Until now, the selection process has relied on phenotypic data and a limited number of molecular markers for simple genetic traits such as resistance to pathogens, without a clearly defined ideotype and was carried out on a large scale. To accelerate the breeding process and address these challenges, we investigated the use of genomic prediction, a methodology using molecular markers to predict genotypic values. In our study, we focused on two existing grapevine breeding programs: Rosé wine and Cognac production. In these programs, several families were created through crosses of emblematic and inter-specific resistant varieties to powdery and downy mildews. 30 traits were evaluated for each program, using two genomic prediction methods: GBLUP (genomic Best Linear Unbiased Predictor) and LASSO (Least Absolute Shrinkage Selection Operator). The results revealed substantial variability in predictive abilities across traits, ranging from 0 to 0.9. These discrepancies could be attributed to factors such as trait heritability and trait characteristics. Moreover, we explored the potential of across-population genomic prediction by leveraging other grapevine populations as training sets. Integrating genomic prediction allowed us to identify superior individuals for each program, using multivariate selection index method. The ideotype for each breeding program was defined collaboratively with representatives from the wine-growing sector.
DOI: 10.57745/fkpw6f
title: ICV du porc,de l'oeuf et de la volaille de chair sous cahier des charges Bleu Blanc Coeur dans AGRIBALYSE®

description: Trois productions ont été sélectionnées pour le projet : le porc, l’oeuf plein air, et la volaille de chair. L’unité fonctionnelle retenue est le kg de produit vif, sorti ferme. Le périmètre de l’étude est « du berceau à la porte de la ferme », à savoir l’ensemble des activités liées à l’élevage : les intrants de l’élevage, les bâtiments d’élevage ainsi que les émissions dues à la gestion des effluents. La méthodologie appliquée est celle d’AGRIBALYSE. L’inventaire porte sur une année de production.
DOI: 10.57745/fozs6i
title: Agro-food Wastes pre-treatment - subcritical water

description: NID characterized the three selected agro-industrial residues, brewery’s spent grains, tomato pomace and potato peels, and performed an acidic hydrolysis as a baseline for comparison between project partners. In parallel, NID developed a subcritical waste pre-treatment. This pretreatment showed better results for the brewery’s spent grains and the potato peels residues. For both materials the temperature of 190 ºC seems to be the most suitable, with low concentration of degradation products being produced, exception made for the lactic acid present on the PP SCW hydrolysate.
DOI: 10.57745/elmc13
title: High polarization lines of the second solar spectrum of the Solar limb

description: We present a dataset of high resolution spectra of the Sun of many strongly polarized lines belonging to the second solar spectrum, i.e. the spectrum near the limb in linear polarization (scattering polarization). These solar spectra were obtained in full Stokes polarimetry (I, Q/I, U/I, V/I) in the quiet Sun at various distances from the limb, and at disk centre for comparison, with the ground based CNRS THEMIS telescope. Polarization rates Q/I up to 7% are obtained in CaI 4227 Å line at μ = cosθ = 0, while 2% is reached in SrI 4607 Å line and 1.4% in BaII 4554 Å. The spectra shown here are freely available in FITS format to the research community.
DOI: 10.57745/gwk1uw
title: Données de réplication pour : Multi-omics study of Non-lesional Atopic Dermatitis epidermis

description: Multi-omics study of non-lesional Atopic Dermatitis (AD) epidermis composed of 6 AD subjects and 8 healthy subjects. SCORAD of AD subjects varies between 20 and 40. Suction blisters were sampled from right and left inner forearms. Proteomic and transcriptomic analyses were performed.
DOI: 10.57745/fo96mu
title: Fiches incertitudes des modèles hydrologiques de surface du projet Explore2 : E Fleuves côtiers de l'Artois-Picardie

description: Ensemble de fiche descriptives des incertitudes du projet Explore2 aux points de simulation pour la région hydrologique E Fleuves côtiers de l'Artois-Picardie Accompagnement de lecture des fiches Incertitudes Le projet Explore2 a produit une quantité inédite de données hydrologiques. Ainsi, des ensembles de projections hydrologiques ont été élaborés sur près de 4000 points de simulation répartis en France hexagonale. Les fiches incertitudes visent à décrire les incertitudes de ces ensembles pour chacun des 3991 points de simulations hydrologiques (surface) obtenus avec la méthode de correction ADAMONT, pour trois indicateurs: QA, QJXA, et QMNA. Les valeurs numériques ne doivent pas être lues sur ces fiches, mais dans les fichiers de données brutes ou d’indicateurs pré-calculés mis à disposition, comme les fiches de synthèse, sur le portail « DRIAS les futurs de l’eau ». Ce document a pour objectif d’expliciter le contenu de ces fiches de synthèse des incertitudes.
DOI: 10.57745/g7e2w1
title: Data set for "Asian knotweed’s impacts on soil chemistry and enzyme activities are context-dependent"

description: Data set for the study untitled "Asian knotweed’s impacts on soil chemistry and enzyme activities are context-dependent". Soil major and minor nutrients and enzyme activities were measured under Reynoutria spp. stands and under adjacent riparian plots. Measured variables are reported in this dataset and material and methods elements are described in the associated manuscript.
DOI: 10.57745/iw6ggb
title: Xenorhabdus kozodoii FR48 epigenetic data

description: DNA methylation was determined using the ds_modification_motif_analysis protocol within SMRT Link 5.1.0 which uses an in silico kinetic reference and a Welch’s t-test based kinetic score detection of modified base positions with parameters set as follow: subread/polymerase read length &gt;= 500, polymerase read quality &gt;= 80 and modification QV &gt;= 30. A score of 30 for the “Modification QV” is the default threshold for calling a position as modified, and corresponds to a p-value of 0.001.
DOI: 10.57745/fsimiq
title: Outils théoriques et méthodologiques pour l’évaluation et ajustement chemin faisant de la mobilisation de jeux sérieux afin d’accompagner les éleveurs dans leurs changements de pratiques

description: Quatre fichiers supports pour conduire l'évaluation chemin-faisant de jeux sérieux avec des agriculteurs.
DOI: 10.57745/hagjjh
title: RNA sequencing from inflorescence meristems of three Arabidopsis thaliana mutant lines: puchi x bop1x bop2 ; lfy-12 and jagged-5D

description: RNA sequencing from micro-dissected meristems of the main shoot of the following mutant lines: the triple mutant puchi-1 x bop1-4 x bop2-11 (PB); the single mutant lfy-12 (L-12), and the single mutant jagged-5D (J5D) at early floral stage (floral transition occured but meristems were sampled before the plants had bolted). These three mutants are in a Col-0 genetic background. Three independant replicates (1, 2, 3) per genotype are provided, each replicate is a pool of ~10 apices. Plants were cultured in classical Arabidopsis growth conditions in culture chambers, starting with 21 days in short days before switching to long-day conditions untill dissection and sampling (See Dieudonné S. et al. for details). cDNA was sequenced using NextSeq500 from Illumina. After classical read quality filtering, each sample yielded on average 43 million sequences.
DOI: 10.57745/hqcbes
title: Optimization of nitrogen management and greenhouse gas balance in agroecological cropping systems in a climate change context : global dataset

description: Agroecological practices, including growing cover crops, are promising practices to adapt to climate change and mitigate greenhouse gas (GHG) emissions. However, their long-term effects on soil nitrogen (N) dynamics and mineral N fertilization in cropping systems requires further investigation. Using a simulation approach, we investigated their long-term effects on maize production, N fertilization requirements, N dynamics, GHG emissions and soil carbon storage. The integrated modeling framework we developed, STICS-TK-R, which includes decision rule models, the STICS crop model, the MERCI decision tool for cover crop residues and an N-balance model for mineral fertilization, enables comprehensive analysis and comparison of agroecological systems. In the context of projected climate change (2016-2050), we simulated six agroecological scenarios that combined two mineral N fertilization practices (i.e., fixed or balanced) and three fallow-period management practices (i.e., bare soil, long legume cover crops or cruciferous cover crops) for five diverse soil and climate conditions in southwestern France.
DOI: 10.57745/h1blsf
title: Erable sycomore (maple tree, Acer pseudoplatanus)

description: Fichier d'impression 3D de bois d'Erable File for 3D printer (Maple tree wood)
DOI: 10.57745/jyhbmm
title: Prediction of quaternary alkali metal hydroxide - water mixture melting points using machine learning

description: Dataset associated with 'Development of molten salt–based processes through thermodynamic evaluation assisted by machine learning' Dataset production context : Molten salt–based processes and hydrofluxes are highly sensitive to mixture composition and require knowledge of the combined melting point for successful materials syntheses. In particular processes using hydroxide–based fluxes (pure salt melts) and hydrofluxes (salt melts containing 15–50% HO) have been shown to be interesting environments to synthesize inorganic materials in high oxidation states. The development of tools to predict these properties is desirable to inform the implementation of processes using these mixtures. In this work, we use an artificial neural network model to estimate the melting points of fluxes and hydrofluxes comprising of quaternary mixtures of NaOH, KOH, LiOH, and H2O. A database of 1644 data points collected from 47 different sources was used in the training of the model. Melting points were predicted from the molar fractions of each component (4 independent variables)... For more information see the article.
DOI: 10.57745/ikymka
title: Replication Data for: Stress Testing the DMARC Reporting System: Compliance with Standards and Ways of Improvement

description: The collected data is used for generating the table presented in the research article: "Stress Testing the DMARC Reporting System: Compliance with Standards and Ways of Improvement," an article accepted at the "CoNEXT 24" conference. The dataset allows for identifying different Email Service Providers (ESP) behaviors within the DMARC reporting system. It consists of an aggregation of: i) Emails sent to registered accounts of multiple ESPs, ii) DMARC reports received in response to the previously sent emails, iii) Bind9 service logs (DNS service): identify behaviors through domain names passive measurements, iv) Rspamd service logs: allow the verification that measurements are correctly performed, v) Domain name configuration ZoneFile: allow the verification of measurement configurations. It contains the measurement data and the generated data using the code in the GitHub repository https://github.com/drakkar-lig/dmarc-conext24.
DOI: 10.57745/iiztyx
title: Table de correspondance COICOP - Nova - produits alimentaires selon le degré de transformation

description: Table de correspondance entre les items de la nomenclature COICOP 1998 (Classification of Individual Consumption by Purpose) telle qu’utilisée dans les enquêtes Budget de famille de 2011 et 2017, à son niveau le plus détaillé (6 positions) et la nomenclature NOVA (Monteiro et al 2018 https://doi.org/10.1017/s1368980017000234) qui catégorise les produits selon leur degré de transformation, d’après leur procédé de production et leur composition.
DOI: 10.57745/isuocw
title: Données de réplication pour : Identification of soil-related professional profiles for the future from a survey of European stakeholders

description: These datasets are related to a paper by Walter et al. published in the European Journal of Soil Science and entitled "Identification of soil-related professional profiles for the future from a survey of European stakeholders". Stakeholders from 24 European countries, selected by the national hubs of the European Joint Programme on agricultural soil management, were invited to propose soil-related professional profiles that they considered important to develop over the next 20 years. They were then asked to identify up to 15 specific or generic skills that they considered necessary for each profile. In total, 299 stakeholders proposed 1-3 professional profiles each, in 20 languages : a total of 786 profiles ranging from the bachelor to doctoral level were proposed and, after translation in English, grouped in 60 different profiles. Statistical analysis of these data led to the grouping of the 60 initial profiles into 10 clusters of profiles that required similar skills: these 10 clusters of profiles were described, and their necessary skills were identified.
DOI: 10.15468/dl.qs3xvd
title: Occurrence Download

description: A dataset containing 341 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Material sample)"
 ]
 }
 },
 "TaxonKey is Nycticeinops schlieffenii (Peters, 1859)",
 "Continent is one of (Africa)",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 341 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028411-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/jppdga
title: Controlled manipulation of solitons in a recirculating fiber loop using external potentials

description: We provide datasets of fiber optics experiments aiming at demonstrating the controlled manipulation of optical solitons in a recirculating optical fiber loop using external potentials. These experimental acquisitions contain the spatiotemporal dynamics of optical solitons recorded using a sampling oscilloscope sequentially triggered and using segmented memory.
DOI: 10.57745/ip6kgr
title: French_CS Data -Economic experiments

description: This dataset contains the data collected during the experimental economics study on beverages, carried out in the laboratory
DOI: 10.57745/iqyeqs
title: A collection of 3D-SIM images of telomeres, centromeres and nuclei in HeLa cells

description: This collection contains several datasets of 3D-SIM images of nuclei in HeLa cells. Nuclei were counter-stained with Hoechst. Immunolabelling was used to target nuclear envelope (SUN-1), nuclear lamina (LaminAC) and either telomeres (TRF1-GFP, labeled with GFP-nanobodies) or centromeres (CREST). For telomeres, there were two experimental conditions: untreated cells and cells treated by siRNA against BAF and LAP2. SUN-1 labelling was used to identify early G1 stages. For siRNA experiments, where no cell synchronization could be performed, the centrosomal protein Cep152 was added in the same channel as SUN-1 to identify cell cycle stages.
DOI: 10.57745/jv0ppq
title: Differences in behavior, facial expressions and locomotion between positive anticipation and frustration in horses

description: Data analysed in the the article 'Differences in behavior, facial expressions and locomotion between positive anticipation and frustration in horses'
DOI: 10.57745/hzekn4
title: Immersed boundary conditions using the spectral difference method

description: Dataset Description This dataset contains the results produced by the JAGUAR software in two different setups: CYL-40 : Steady-state flow around a cylinder at Re=40 RH-400-20-4 : Turbulent flow in a rough heated channel at Reτ=400 These setups are used to assess the performance of a volume penalization method used to incorporate immersed boundaries. For each setup, two computations are provided: One with immersed boundaries using the volume penalization (VP) method One with a body-fitted (BF) mesh The files included in this dataset are: Coma-Separated Values (.csv) files containing post-treated results for the considered case Gmsh scripts (.geo) used for the mesh generation, when available. Gmsh version 4.13.5 was used to develop these scripts. Gmsh meshes (.msh) generated with the corresponding script file. Those are using the legacy ASCII 2.0 format. VTK files containing dense visualization data when available, in the .vtu format. The authors recommands the use of the Paraview visualization software to read and use those files. Please note that due to the nature of the spectral difference method, the visualization data provided is already interpolated on a refined version of the mesh using the polynomial interpolation. In the VP computations, this leads to non-physical oscillations near the interface, that can be filtered using a surface reconstruction alglrithm, which is not provided with this dataset. For the RH-400-20-4 setup, the .geo file for the BF computation is not included, as it depends on a custom Gmsh library containing functions used to mesh the hemispheres. Here is the global structure of the dataset. . ├── CYL-40 &lt; Setup │ ├── BF &lt; Case │ │ ├── CYL-40-BF.csv &lt; Post-treated results │ │ ├── CYL-40-BF.geo &lt; Gmsh script │ │ ├── CYL-40-BF.msh &lt; Gmsh mesh file │ │ └── CYL-40-BF.vtu &lt; Paraview visualization │ └── VP │ ├── CYL-40-VP.csv │ ├── CYL-40-VP.geo │ ├── CYL-40-VP.msh │ └── CYL-40-VP.vtu └── RH-400-20-4 ├── BF │ ├── RH-400-20-4-BF.csv │ ├── RH-400-20-4-BF.msh └── VP ├── RH-400-20-4-VP.csv ├── RH-400-20-4-VP.geo └── RH-400-20-4-VP.msh The JAGUAR software uses the Spectral Difference method to discretize the Navier-Stokes equations. The provided data was generated using the following parameters: The polynomial order was set to p=2 for the CYL-40 computations, and p=3 for the RH-400-20-4 computations. The Riemann solver used in the SD method was Roe's Riemann solver. The diffusion scheme used in the SD method was the he first scheme of Bassi and Rebay (BR1). The solution points are the Gauss-Chebyshev nodes of the first kind. The internal flux points are the Legendre-Gauss nodes. The time integration scheme is the five-stages fourth-order in time Strong Stability Preserving Runge-Kutta (RK54SSP) scheme of Spiteri and Ruuth (RK54SSP).
DOI: 10.57745/kcn9yh
title: Plateforme systèmes de culture : SIC

description: Les données résultent de l’évaluation expérimentale de 4 systèmes de culture. Les objectifs du Système Productif à Hautes Performances Environnementales (PHPE) sont de satisfaire un ensemble de critères environnementaux (réduction de la pollution par les pesticides et nitrate ; augmentation de la biodiversité implantée) quantifiés et d’atteindre, dans ce cadre, une production élevée. Pour les trois autres systèmes, au respect des objectifs environnementaux du système PHPE s’ajoute une contrainte environnementale forte supplémentaire. Dans le Système Sans pesticide (SsPest), il est interdit d’utiliser tout traitement phytosanitaire (produits chimiques de synthèse et produits autorisés en agriculture biologique). Dans le Système Energie moins (ENm), la consommation d’énergie fossile doit être réduite de moitié à l’échelle du système par rapport au système PHPE. Dans le Système Gaz à Effet de Serre moins (GESm), les émissions de gaz à effet de serre doivent être réduites de moitié par rapport au système PHPE. Pour ces trois derniers systèmes, les niveaux de production seront aussi élevés que possible compte tenu des contraintes et objectifs environnementaux assignés. Cette évaluation sur le long terme (12 ans : 2009-2020), initiée en 2008, se déroule sur une parcelle de plus de six hectares, sur des sols limoneux, très homogènes et profonds (profondeur supérieure à 1,80m) de la ferme d’AgroParisTech à Grignon (78, France : N 48.84°, E 1.95°). Le dispositif comporte trois répétitions pour chacun des quatre systèmes, et la surface élémentaire des parcelles est de 4100m². Compte tenu de la forte homogénéité du sol, la variabilité interannuelle du climat a été privilégiée. Chaque année, chaque système de culture est représenté par une culture différente de la succession dans chacun des blocs. Dans ce dispositif, des mesures nombreuses visent en premier lieu à évaluer la capacité des systèmes de culture à satisfaire les contraintes, les objectifs environnementaux et les niveaux de production assignés. Des diagnostics agronomiques appropriés permettent également de comprendre les raisons de ces performances. Les évolutions à moyen/long terme des caractéristiques physiques (état structural des sols,…), chimiques (teneurs en éléments minéraux, en pesticides et en matières organiques des sols) et biologiques (communautés de vers de terre et d’arthropodes, microflore des sols, peuplement d’adventices,…) du champ cultivé sont caractérisées et analysées pour évaluer les conséquences des systèmes expérimentés sur l’évolution des milieux. Les données disponibles sont complémentaires à celles publiées dans divers data papers et disponibles dans data.gouv. Ici sont aussi retranscrits les règles de décision définies en début de période expérimentales pour conduire de façon technique les différents systèmes de culture.
DOI: 10.57745/isln5e
title: Corpus of political speeches and performances associated with the project ECOPOP, ‘Performers of the Climate Crisis: Eco-populism and Political Representation in the Anthropocene’

description: To chart the impact of the populist style (opposition between people and elite, transgression and performance of crisis) on green political communication, I have constituted a corpus of political speeches and performances of three political actors selected for their use of a more conflictual and engaging type of rhetoric: Greta Thunberg in Sweden, Sandrine Rousseau in France and Alexandria Ocasio-Cortez in the United States.
DOI: 10.57745/i0j6lz
title: EPSL 2023 on Transformation Microstructures in Pyrolite

description: Data files from the experiments presented in this publication include: raw .tif images of collected multigrain X-ray diffraction, filtered peak files (.flt), crystallographic information files (.cif), and the parameter files (.prm) necessary for grain indexing.