cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3562524
title: A Computational Theory for the Emergence of Grammatical Categories in Cortical Dynamics

description: The file <strong>Corpora.txt </strong>keeps the corpus used to train the model and the different instances of the classifier. It is basically a text file with one sentence per line from the original corpus called <strong>test.tsv</strong> available at https://github.com/google-research-datasets/wiki-split.git. We eliminated punctuation marks and special characters from the original file putting each sentence per line. <strong>Enju_Output.txt </strong>holds the outputs generated by Enju in -so mode (Output in stand-off format) using Corpora.txt as input. This file has basically a natural language English per-sentence parse with a wide-coverage probabilistic for HPSG grammar. The file <strong>Supervision.txt </strong>keeps the grammatical tags of the corpus. This file holds a tag per word and each tag is situated in a single line. Sentences are separated by one empty line while tags from words in the same sentence are located in adjacent lines. The file<strong> Word_Category.txt</strong> carries the coarse-grained word category information needed by the model and introduced in it by apical dendrites. Each word in the corpus has a word-category tag which provides additional constraints to those provided by lateral dendrites. This file contains a tag per word and each tag is situated in a single line. Sentences are separated by one empty line while tags from words in the same sentence are located in adjacent lines. The file <strong>SynSemTests.xlsx</strong> keeps all the grammar classification results as well as the statistical analysis in the classification tests.
DOI: 10.24431/rw1k337
title: Developing a Euphausiid biomass time series for the central Gulf of Alaska continental shelf, June 2003, 2005, 2011 and 2013

description: In this study, we identified euphausiid (krill) backscatter using relative frequency response and targeted trawling, and created an annual index of abundance for euphausiids. Four years of AT and bottom-trawl survey data (June-August 2003, 2005, 2011, and 2013) were available from consistently sampled areas around Kodiak Island, including Shelikof Strait, Barnabas Trough, and Chiniak Trough. These data were collected during summer acoustic-trawl (AT) surveys conducted by NOAA’s Alaska Fisheries Science Center aboard the NOAA ships Oscar Dyson or Miller Freeman using standard acoustic survey techniques (Simmonds and MacLennan 2005). In the eastern Bering Sea, a time series of euphausiid biomass was developed using data from acoustic-trawl surveys of walleye pollock that are regularly conducted by NOAA Fisheries, Alaska Fisheries Science Center. Data are presented as two CSV files: NPRB_1208_data_bylatlon.csv NPRB_1208_data_byyear.csv
DOI: 10.26302/sshade/experiment_gs_20170713_005
title: Ag K edge XAS transmission of synthetic acanthite Ag2S
DOI: 10.5281/zenodo.3563072
title: Dataset for "Universal Loop assembly (uLoop): open, efficient, and species-agnostic DNA fabrication" Version 2

description: This data is associated to the project "<strong>Universal Loop assembly (uLoop): open, efficient, and species-agnostic DNA fabrication". </strong>For more details see: https://osf.io/kw4fh/ Data is organized as follows: <strong>DNA</strong>: DNA genbank files for uLoop receivers, L0 parts and L1, L2, L3 and L4 assemblies <strong>Efficiency-productivity</strong>: scoring representing uLoop assembly efficiency <strong>Performance-bac:</strong> flow cytometry and plate fluorometry data describing the stability of uLoop genetic constructs in E coli <strong>GFP_to_RFP_ratio_raw_data_3N</strong>: raw data for fig4A (Pollak et al. 2019) <strong>Growth_rate_analysis_raw_data_3N:</strong> raw data for fig4C (Pollak et al. 2019)
description: This work was funded by the Gordon and Betty Moore Foundation [GBMF5007.01 to CLD and VB, GBMF4981.01 to FF and PvD]. BP was supported by the Programa de Apoyo a Centros con Financiamiento Basal [grant number AFB 170004]. AK was supported by the National Institutes of Health [grant number 1R01DK11077001A1]. FF, BP, TM and IN were supported by Instituto Milenio iBio and PvD by the Instituto Milenio de Oceanografía [grant number IC120019] of the Iniciativa Científica Milenio MINECON. IN was also supported by a PUC VRI PhD studentship and AC was supported by CONICYT scholarship for doctoral degrees in Chile [grant number 21150778].
DOI: 10.26302/sshade/experiment_op_20181105_001
title: Zn K edge XAS transmission of Zn metallic foil reference at ambient conditions
DOI: 10.17632/kzry43k9nb.1
title: G2DEM: A parallel two-dimensional electromagnetic PIC code for the study of electron-cyclotron instabilities of relativistic electron beams in cylindrical cavities

description: Abstract A two-dimensional PIC code aimed at the investigation of electron-cyclotron beam instabilities in gyrotrons and their effects on the beam quality is presented. The code is based on recently developed techniques for handling charge conservation and open boundaries and uses all electromagnetic field which is decomposed in its transverse magnetic (TM) and electric (TE) components. The code has been implemented on the massively parallel computer CRAY T3D, but can also be run on a single processor... Title of program: G2DEM Catalogue Id: ADGD_v1_0 Nature of problem G2DEM (Gyrotron 2 Dimensions ElectroMagnetic) solves Maxwell's equations and the relativistic equations of motion for an annular electron beam in an axisymmetric cylindrical cavity (r,z) open at both ends. This program is used to determine the effects of electron-cyclotron instabilities (electrostatic and electromagnetic) on the velocity distribution of the beam. This is of practical interest, because the best gyrotron efficiency is obtained with monochromatic beams and any beam degradation, lea ... Versions of this program held in the CPC repository in Mendeley Data ADGD_v1_0; G2DEM; 10.1016/S0010-4655(97)00057-X This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.7910/dvn/eberm1/lx8tjj
title: KCH_Pediatric_Admission_1989_2018.dta

description: De-identified dataset (STATA version 13)
DOI: 10.7910/dvn/eberm1/pzmzxq
title: KCH_Paediatric_Admission_Codebook.xml

description: Variable codebook in machine-readable format (xml)
DOI: 10.7910/dvn/eberm1/r8hxr7
title: KCH_Paediatric_Admission_Codebook.pdf

description: Variable codebook in pdf format
DOI: 10.21227/cwfj-wp44
title: Graphical Summaries

description: Figure A and B:A:▲：Comparison of total PTSD scores of the treatment group within before and after1, 2 and 3 months treatment(P0.01).▼：Comparison of total PTSD scores between treatment group and control group(P0.01).■：Look at the control group, there was no significant difference between before treatment and1 month after treatment(P0.05), butthere was significant difference in the 2 months after treatment(P0.05), and the difference was more significant in the 3 months after treatment(P0.01).B: ▲：Comparison of the total FIM scores of the treatment group before and after 1, 2 and 3 months treatment(P0.01).▼：Comparison of total FIM scores between treatment group and control group(P0.01).■：Comparison of total PTSD scores of the control group before and after treatmentin1, 2 and 3 months(P0.01).Data expressed as mean ± standard error (SEM)Figure C▼：Compared with the total score of PTSD Scale in the SCI patients group and the healthy control group (P0.01).The data showed as mean ± standard error (SEM)Figure DThe modified Barthel Indexaccording to FIM scale was correlated with the total score of PTSD, and the data was expressed as mean ± standard error (SEM) * P 0.05, * * P 0.01.
DOI: 10.7910/dvn/eberm1/mfwwci
title: KCH_Paediatric_Admission_Codebook.pdf

description: Variable codebook in pdf format
DOI: 10.7910/dvn/vclf5z/ta8kab
title: Details of numerical calculation of the paper (Efficient Image-Based Simulation of Flow and Transport in Heterogeneous Porous Media Application of Curvelet Transforms).xlsx

description: :unav
DOI: 10.21227/496t-w077
title: Graphical Summaries

description: Figure A and B:A:▲：Comparison of total PTSD scores of the treatment group within before and after1, 2 and 3 months treatment(P0.01).▼：Comparison of total PTSD scores between treatment group and control group(P0.01).■：Look at the control group, there was no significant difference between before treatment and1 month after treatment(P0.05), butthere was significant difference in the 2 months after treatment(P0.05), and the difference was more significant in the 3 months after treatment(P0.01).B: ▲：Comparison of the total FIM scores of the treatment group before and after 1, 2 and 3 months treatment(P0.01).▼：Comparison of total FIM scores between treatment group and control group(P0.01).■：Comparison of total PTSD scores of the control group before and after treatmentin1, 2 and 3 months(P0.01).Data expressed as mean ± standard error (SEM)Figure CThe modified Barthel Indexaccording to FIM scale was correlated with the total score of PTSD, and the data was expressed as mean ± standard error (SEM) * P 0.05, * * P 0.01.
DOI: 10.21227/6j0q-3b31
title: Graphical Summaries

description: Figure A and B:A:▲：Comparison of total PTSD scores of the treatment group within before and after1, 2 and 3 months treatment(P0.01).▼：Comparison of total PTSD scores between treatment group and control group(P0.01).■：Look at the control group, there was no significant difference between before treatment and1 month after treatment(P0.05), butthere was significant difference in the 2 months after treatment(P0.05), and the difference was more significant in the 3 months after treatment(P0.01).B: ▲：Comparison of the total FIM scores of the treatment group before and after 1, 2 and 3 months treatment(P0.01).▼：Comparison of total FIM scores between treatment group and control group(P0.01).■：Comparison of total PTSD scores of the control group before and after treatmentin1, 2 and 3 months(P0.01).Data expressed as mean ± standard error (SEM)Figure CThe modified Barthel Indexaccording to FIM scale was correlated with the total score of PTSD, and the data was expressed as mean ± standard error (SEM) * P 0.05, * * P 0.01.
DOI: 10.17632/2856478p54.1
title: A family of enhanced Lehmer random number generators, with hyperplane suppression, and direct support for certain physical applications

description: Abstract Over two hundred congruential pseudorandom number generators, each with a different multiplier, are built into a single assembler routine that returns 32-bit integer and floating-point values. This gives a Monte Carlo user the opportunity of selecting a combination of sequences, so as to provide a greater appearance of chaos. The software makes use of extended 64-bit arithmetic on Intel 386/387 (or higher) chips, thus attaining a period of 2^(62)for each of the individual generators. The r... Title of program: RNLEHMER200 Catalogue Id: ADGW_v1_0 Nature of problem Any Monte Carlo calculation in physics, especially those related to nuclear geophysics. Versions of this program held in the CPC repository in Mendeley Data ADGW_v1_0; RNLEHMER200; 10.1016/S0010-4655(97)00101-X This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/5w5cgvzbb9.1
title: B-spline finite elements and their efficiency in solving relativistic mean field equations

description: Abstract A finite element method using B-splines is presented and compared with a conventional finite element method of Lagrangian type. The efficiency of both methods has been investigated at the example of a coupled nonlinear system of Dirac eigenvalue equations and inhomogeneous Klein-Gordon equations which describe a nuclear system in the framework of relativistic mean field theory. Although FEM has been applied with great success in nuclear RMF recently, a well known problem is the appearance of ... Title of program: bspFEM.cc Catalogue Id: ADHP_v1_0 Nature of problem The ground-state of a spherical nucleus is described in the framework of relativistic mean field theory in coordinate space. The model describes a nucleus as a relativistic system of baryons and mesons. Nucleons interact in a relativistic covariant manner through the exchange of virtual mesons: the isoscalar scalar sigma-meson, the isoscalar vector omega-meson and the isovector vector rho-meson. The model is based on the one boson exchange description of the nucleon-nucleon interaction. Versions of this program held in the CPC repository in Mendeley Data ADHP_v1_0; bspFEM.cc; 10.1016/S0010-4655(98)00003-4 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/jwjmbs22ff.1
title: Maple procedures for the coupling of angular momenta II. Sum rule evaluation

description: Abstract In a previous paper (S. Fritzsche, Comput. Phys. Commun. 103 (1997) 51), we defined data structures to deal with typical expressions from Racah algebra within the framework of Maple. Such expressions arise very frequently in various fields, for instance, by treating composite wave functions and tensor operators in many-particle physics. Often, these Racah expressions are written in terms of Clebsch-Gordan coefficients and Wigner n-j symbols. Our previous set of Maple procedures mainly concern... Title of program: Racah Catalogue Id: ADFV_v2_0 [ADHW] Nature of problem Computer algebra (CA) is used to evaluate and to simplify typical expressions from Racah algebra which may also include the summation over dummy quantum numbers. A large variety of sum rules is implemented in a set of Maple commands for interactive use. Versions of this program held in the CPC repository in Mendeley Data ADFV_v1_0; Racah; 10.1016/S0010-4655(97)00032-5 ADFV_v2_0; Racah; 10.1016/S0010-4655(98)00021-6 ADFV_v3_0; RACAH; 10.1016/S0010-4655(00)00234-4 ADFV_v4_0; RACAH; 10.1016/S0010-4655(01)00218-1 ADFV_v5_0; RACAH; 10.1016/S0010-4655(01)00219-3 ADFV_v6_0; RACAH; 10.1016/S0010-4655(02)00591-X ADFV_v7_0; RACAH; 10.1016/S0010-4655(03)00227-3 ADFV_v8_0; RACAH; 10.1016/j.cpc.2004.11.003 ADFV_v9_0; RACAH; 10.1016/j.cpc.2005.12.008 ADFV_v10_0; RACAH; 10.1016/j.cpc.2009.06.018 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.5519/qd.wiio5yiv
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.17632/vhcdx38fsz.1
title: Colour: a computer program for QCD colour factor calculations

description: Abstract A computer program for evaluating colour factors of QCD Feynman diagrams is presented, and illustrative examples on how to use the program to calculate nontrivial colour factors are given. The program and the discussion in this paper is based on a diagrammatic approach to colour factors. Title of program: colour Catalogue Id: ADEW_v1_0 Nature of problem In many QCD Feynman diagrams there is a need to calculate the colour factor. This program calculates colour factors fast and accurately. Versions of this program held in the CPC repository in Mendeley Data ADEW_v1_0; colour; 10.1016/S0010-4655(96)00140-3 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.25345/c5vm27
title: MassIVE MSV000084661 - 201912_the molecuar network of PT with/without incubation of Eurotium cristatum
title: In order to test the ability of Eurotium cristatum to modify the structures of the main/typical tea compounds, i.e., theanine, caffeine and epigallocatechin gallate (EGCG), we prepared the PDA medium containing the three tea compounds (PT) and incubated the fungus on the PT. The deposited data here is a FBMN one.
DOI: 10.5281/zenodo.3561145
title: Climate models simulations archive for analysis of ENSO influence on Arctic stratosphere

description: CMIP5 model (CCSM4, CMCC-CMS, CNRM-CM5, IPSL-CM5B-LR, MRI-CGCM3, MIROC5) data of historical simulation (1950-2005): daily zonal mean temperature averaged over 70-90N, zonal mean zonal wind averaged over 60-62N, and geopotential height averaged over 50-70N at hPa levels from 1000 to 10 hPa (29 February removed)
DOI: 10.5281/zenodo.3561146
title: Climate models simulations archive for analysis of ENSO influence on Arctic stratosphere

description: CMIP5 model (CCSM4, CMCC-CMS, CNRM-CM5, IPSL-CM5B-LR, MRI-CGCM3, MIROC5) data of historical simulation (1950-2005): daily zonal mean temperature averaged over 70-90N, zonal mean zonal wind averaged over 60-62N, and geopotential height averaged over 50-70N at hPa levels from 1000 to 10 hPa (29 February removed)
DOI: 10.25345/c50d5j
title: MassIVE MSV000084660 - SCoPE2 expanded data sets 20191204
title: The fate and physiology of individual cells are controlled by protein interactions. Yet, our ability to quantitatively analyze proteins in single cells has remained limited. To overcome this barrier,we developed SCoPE2. It introduces automated and miniaturized sample preparation, substantially increasing quantitative accuracy while lowering cost and hands-on time. These advances enabled us to analyze the emergence of cellular heterogeneity as homogeneous monocytes differentiated into macrophage-like cells in the absence of polarizing cytokines. SCoPE2 quantified over 2,700proteins in 1,018 single monocytes and macrophages in ten days of instrument time, and the quantified proteins allowed us to discern single cells by cell type. Furthermore, the data uncovered acontinuous gradient of proteome states for the macrophage-like cells, suggesting that macrophage heterogeneity may emerge even in the absence of polarizing cytokines. Parallel measurements of transcripts by 10x Genomics scRNA-seq suggest that SCoPE2 samples 20-fold more copies per gene, thus supporting quantification with improved count statistics. Joint analysis of the data indicated that most genes had similar responses at the protein and RNA levels, though the responses of hundreds of genes differed. Our methodology lays the foundation for automated and quantitative single-cell analysis of proteins by mass spectrometry.
DOI: 10.17632/2mmybs2ywy.1
title: I-NoLLS: A program for interactive nonlinear least-squares fitting of the parameters of physical models

description: Abstract The I-NoLLS program is a package for carrying out interactive nonlinear least-squares fits to determine the parameters of physical or mathematical models from experimental or other data, under circumstances where automated least-squares procedures are excessively computationally expensive and the user needs interactive control to apply physical insight to the fitting process. The program was developed to facilitate the fitting of molecular potential energy surfaces (PES) to spectroscopic and ... Title of program: I-NoLLS Catalogue Id: ADFN_v1_0 Nature of problem I-NoLLS permits interactive least-squares fitting of the parameters of analytical models to physical properties or other data. Versions of this program held in the CPC repository in Mendeley Data ADFN_v1_0; I-NoLLS; 10.1016/S0010-4655(97)00013-1 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/7p9rgzxkcf.1
title: The ASAD atmospheric chemistry integration package and chemical reaction database

description: Abstract The ASAD software package frees the atmospheric chemist from writing code to solve chemical time dependent equationsand can be used for a wide range of problems including stratospheric chemistry, tropospheric chemistry or pollution studies, and for 1D, 2D and 3D models. Since little programming is required, the effects of programming errors are greatly reduced and consistent results between different models ensured. Through the use of input files to list the desired chemical species and their... Title of program: ASAD Catalogue Id: ADGC_v1_0 Nature of problem ASAD has been designed to be the chemical part of an atmospheric chemisry-transport model. It is not a complete atmospheric chemistry model. It solves the time-dependent chemical equations. The problem is specified by inputting a list of chemical species, their properties and a list of chemical reactions. The user can also include some of the common approximations (such as chemical families) used in atmospheric chemistry models. ASAD has been designed to be treated as a black box and therefore h ... Versions of this program held in the CPC repository in Mendeley Data ADGC_v1_0; ASAD; 10.1016/S0010-4655(97)00056-8 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.17632/vhsynj534s.1
title: Maple procedures for the coupling of angular momenta. VI. LS–jj transformations

description: Abstract Transformation matrices between different coupling schemes are required, if a reliable classification of the level structure is to be obtained for open-shell atoms and ions. While, for instance, relativistic computations are traditionally carried out in jj-coupling, a LSJ coupling notation often occurs much more appropriate for classifying the valence-shell structure of atoms. Apart from the (known) transformation of single open shells, however, further demand on proper transformation coeffic... Title of program: RACAH Catalogue Id: ADFV_v6_0 [ADQP] Nature of problem For open-shell atoms and ions, a reliable classification of the level structure often requires the knowledge of the LS-jj transformation matrices in order to find the main components of the wave functions as well as their proper spectroscopic notation. Apart from the transformation of individual (sub-)shell states, matrices of much larger complexity arise for the transformation of symmetry-adapted configuration state functions which are constructed from the coupling of two or more open shells. Versions of this program held in the CPC repository in Mendeley Data ADFV_v1_0; Racah; 10.1016/S0010-4655(97)00032-5 ADFV_v2_0; Racah; 10.1016/S0010-4655(98)00021-6 ADFV_v3_0; RACAH; 10.1016/S0010-4655(00)00234-4 ADFV_v4_0; RACAH; 10.1016/S0010-4655(01)00218-1 ADFV_v5_0; RACAH; 10.1016/S0010-4655(01)00219-3 ADFV_v6_0; RACAH; 10.1016/S0010-4655(02)00591-X ADFV_v7_0; RACAH; 10.1016/S0010-4655(03)00227-3 ADFV_v8_0; RACAH; 10.1016/j.cpc.2004.11.003 ADFV_v9_0; RACAH; 10.1016/j.cpc.2005.12.008 ADFV_v10_0; RACAH; 10.1016/j.cpc.2009.06.018 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/ynj9w9tndg.1
title: GLie: a MAPLE program for lie supersymmetries of Grassmann-valued differential equations

description: Abstract A MAPLE program, named GLie, has been developed to compute the determining equations of nonlinear systems of both conventional and Grassmann-valued partial differential equations. The program is the outcome of an extension of the Lie symmetry method for Grassmann-valued partial differential equations. The capabilities of the program are described through a variety of physical examples. Title of program: GLie Catalogue Id: ADEP_v1_0 Nature of problem The construction of the Lie symmetry superalgebra of a system of Grassmann-valued differential equations (SGVDE) is a first step in the resolution of such a system. The next step would be the use of symmetry reduction method to get a simpler system which could be solved easily. Versions of this program held in the CPC repository in Mendeley Data ADEP_v1_0; GLie; 10.1016/S0010-4655(96)00129-4 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)