cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3528377
title: Supplement 1. Data used for the statistical analyses.

description: File List data.txt Description The data.txt file is a tab-delimited ascii file. The file contains the data used in meta-analyses of the influence of intraguild predation on prey suppression and prey release. See the published paper for details about the calculation of the effect sizes and variances. Column definitions: A = First author’s last name B = Year of publication C = Substudy included (e.g., which prey density data or which prey species data was used, if multiple were included in a paper) D = Journal in which study was published E = Last name of the study co-author F = Volume of the publication G = Starting page number of the publication H = Ecosystem type (i.e., lotic, lentic, marine, terrestrial invertebrate, or terrestrial vertebrate [in which at least one species is a vertebrate]) I = IGP type (i.e., none, unidirectional, mutual, or unclear) J = Experimental duration (i.e., length of the experiment) K = Whether this data represents an average of several data points (e.g., time measurements or densities) L = R<sub>S</sub>, prey survival with the most effective predator alone relative to prey survival with both predators M = Variance of R<sub>S</sub> N = R<sub>E</sub>, prey survival with the intermediate predator relative to prey survival with the top predator O = Variance of R<sub>E</sub> P = E<sub>TP</sub>, effect of adding a top predator to a system that has an intermediate predator Q = Pooled variance of E<sub>TP</sub> R = E<sub>IP</sub>, effect of adding an intermediate predator to a system that has a top predator S = Pooled variance of E<sub>IP</sub> T = S<sub>TP</sub>, prey suppression with the top predator alone, relative to control U = S<sub>IP</sub>, prey suppression with the intermediate predator alone, relative to control
DOI: 10.6084/m9.figshare.3528377.v1
title: Supplement 1. Data used for the statistical analyses.

description: File List data.txt Description The data.txt file is a tab-delimited ascii file. The file contains the data used in meta-analyses of the influence of intraguild predation on prey suppression and prey release. See the published paper for details about the calculation of the effect sizes and variances. Column definitions: A = First author’s last name B = Year of publication C = Substudy included (e.g., which prey density data or which prey species data was used, if multiple were included in a paper) D = Journal in which study was published E = Last name of the study co-author F = Volume of the publication G = Starting page number of the publication H = Ecosystem type (i.e., lotic, lentic, marine, terrestrial invertebrate, or terrestrial vertebrate [in which at least one species is a vertebrate]) I = IGP type (i.e., none, unidirectional, mutual, or unclear) J = Experimental duration (i.e., length of the experiment) K = Whether this data represents an average of several data points (e.g., time measurements or densities) L = R<sub>S</sub>, prey survival with the most effective predator alone relative to prey survival with both predators M = Variance of R<sub>S</sub> N = R<sub>E</sub>, prey survival with the intermediate predator relative to prey survival with the top predator O = Variance of R<sub>E</sub> P = E<sub>TP</sub>, effect of adding a top predator to a system that has an intermediate predator Q = Pooled variance of E<sub>TP</sub> R = E<sub>IP</sub>, effect of adding an intermediate predator to a system that has a top predator S = Pooled variance of E<sub>IP</sub> T = S<sub>TP</sub>, prey suppression with the top predator alone, relative to control U = S<sub>IP</sub>, prey suppression with the intermediate predator alone, relative to control
DOI: 10.6084/m9.figshare.3528374
title: Appendix A. Empirical basis of parameter ranges for focal parameters.

description: Empirical basis of parameter ranges for focal parameters.
DOI: 10.6084/m9.figshare.3528371
title: Data Paper. Data Paper

description: File List Files are ASCII text, tab delimited. No compression schemes were used. Oosting_pres1.txt -- for the multiscale vascular plant grid data collected in 1989, with species as columns. Consists of 1124 lines, not including the header row. Oosting_pres2.txt -- contains identical data to oosting_pres1.txt but has species as attributes. Consists of 21253 lines, not including the header row. species_codes.txt -- for the species names. Consists of 224 records, not including the header row. Oosting_Trees_1998.txt -- for the trees sampled in 1990 and 1998. Consists of 12973 records, not including the header row. Oosting_env.txt -- for soil and altitude data collected in 1990. Consists of 289 records, not including the header row. Description We present a data set collected in 1989 of vascular plant occurrences in overlapping grids of nested plots in the Oosting Natural Area of the Duke Forest, Orange County, North Carolina, USA. The purpose of these data is to allow the study of vascular plant biodiversity at multiple spatial scales, in terms of both grain and extent. There are eight distinct plot sizes (grains), with size four times that of the next smallest, from 0.015625 m<sup>2</sup> to 256 m<sup>2</sup>. Larger grains are possible by aggregating adjacent plots. Extents (linear distances between plots) range from 1m to 362 m. In addition, trees were mapped over the entire 256 m × 256 m study site in 1990, and again in 1998 to assess the effects of Hurricane Fran in September 1996. Tree species, diameters, and damage descriptors (1998 only) were also recorded. Soils were gathered from the entire grid in 1990 and analyzed for nutrients, pH, and organic matter. These data have already been used to assess scale dependence of plant diversity, to evaluate new methods for the study of spatial scale, and to study the importance of spatial scale on the interpretation of hurricane damage to forests. They are presented as a case study for future scale research. <i>Key words: distance decay; hurricane; North Carolina; soil nutrients; spatial scale; species–area relationships; tree mapping; vascular plants</i>.
DOI: 10.6084/m9.figshare.3528368
title: Data Paper. Data Paper

description: File List arcexport.zip -- Arc coverages in ArcExport format. Contains a series of subdirectories with files for each year that the quadrat was mapped. allrecords.csv -- 163,401 records, ASCII text, comma separated. No compression scheme was used. quadrat_info.csv -- 64 records, ASCII text, comma separated. No compression scheme was used. quadrat_inventory.csv -- 43 records, ASCII text, comma separated. No compression scheme was used. species_list.csv -- 152 records, ASCII text, comma separated. No compression scheme was used. monthly_temp.csv -- 112 records, ASCII text, comma separated. No compression scheme was used. monthly_ppt.csv -- 112 records, ASCII text, comma separated. No compression scheme was used. Description Demographic data will play a central role in testing current theories in plant ecology and forecasting the effects of global change. However, long-term data on vital rates are very limited, especially for species in herbaceous plant communities. Here we present a data set that has great potential to increase our understanding of plant demographic processes. Every year from 1932 to 1972, researchers in Hays, Kansas (USA), mapped all individual plants in a series of 1-m<sup>2</sup> quadrats in a mixed grass prairie. The rare combination of temporal extent and fine spatial resolution makes it possible to follow individual herbaceous plants (or genets) through time and to answer questions such as: How does individual survival and recruitment vary with precipitation and temperature? How are these relationships modified by interactions with neighboring conspecifics and heterospecifics? The data set includes the digitized maps in Arc Export format, a tabular, nonspatial version of the entire data set, descriptive information about each quadrat including its sampling schedule, a species list containing information on plant functional types, and monthly climate data. <i>Key words: climate; competition; demography; Geographic Information System; grassland, plant community</i>.
DOI: 10.6084/m9.figshare.3528365
title: Appendix A. Investigated species and their life history traits.

description: Investigated species and their life history traits.
DOI: 10.6084/m9.figshare.3528365.v1
title: Appendix A. Investigated species and their life history traits.

description: Investigated species and their life history traits.
DOI: 10.6084/m9.figshare.3528362
title: Appendix B. Stepwise modeling procedure.

description: Stepwise modeling procedure.
DOI: 10.6084/m9.figshare.3528362.v1
title: Appendix B. Stepwise modeling procedure.

description: Stepwise modeling procedure.
DOI: 10.6084/m9.figshare.3528359
title: Appendix C. Results of the multivariate analysis showing the effects of life history traits and extrinsic threats on extinction risk.

description: Results of the multivariate analysis showing the effects of life history traits and extrinsic threats on extinction risk.
DOI: 10.6084/m9.figshare.3528359.v1
title: Appendix C. Results of the multivariate analysis showing the effects of life history traits and extrinsic threats on extinction risk.

description: Results of the multivariate analysis showing the effects of life history traits and extrinsic threats on extinction risk.
DOI: 10.6084/m9.figshare.3528356
title: Appendix A. Comparison of R2 values in models where realized species richness (RSR) or realized functional richness (RFR) were used as covariates, block and water treatment were used as fixed factors, and the various items were used as response variables.

description: Comparison of R2 values in models where realized species richness (RSR) or realized functional richness (RFR) were used as covariates, block and water treatment were used as fixed factors, and the various items were used as response variables.
DOI: 10.6084/m9.figshare.3528356.v1
title: Appendix A. Comparison of R2 values in models where realized species richness (RSR) or realized functional richness (RFR) were used as covariates, block and water treatment were used as fixed factors, and the various items were used as response variables.

description: Comparison of R2 values in models where realized species richness (RSR) or realized functional richness (RFR) were used as covariates, block and water treatment were used as fixed factors, and the various items were used as response variables.
DOI: 10.6084/m9.figshare.3528353
title: Appendix A. Properties (ranges, CVs, and correlations) of environmental variables.

description: Properties (ranges, CVs, and correlations) of environmental variables.
DOI: 10.6084/m9.figshare.3528353.v1
title: Appendix A. Properties (ranges, CVs, and correlations) of environmental variables.

description: Properties (ranges, CVs, and correlations) of environmental variables.
DOI: 10.6084/m9.figshare.3528350
title: Appendix B. Variation in community composition (NMDS) due to heavy metals, Ca:Mg, water availability, nutrient availability, and productivity.

description: Variation in community composition (NMDS) due to heavy metals, Ca:Mg, water availability, nutrient availability, and productivity.
DOI: 10.6084/m9.figshare.3528350.v1
title: Appendix B. Variation in community composition (NMDS) due to heavy metals, Ca:Mg, water availability, nutrient availability, and productivity.

description: Variation in community composition (NMDS) due to heavy metals, Ca:Mg, water availability, nutrient availability, and productivity.
DOI: 10.6084/m9.figshare.3528347
title: Appendix A. Regression equations used to estimate biomass of caddisflies from case length.

description: Regression equations used to estimate biomass of caddisflies from case length.
DOI: 10.6084/m9.figshare.3528347.v1
title: Appendix A. Regression equations used to estimate biomass of caddisflies from case length.

description: Regression equations used to estimate biomass of caddisflies from case length.
DOI: 10.6084/m9.figshare.3528344
title: Appendix A. The outcome of model extensions to iteroparity, predators with growth linked to prey capture, prey-size dependent predator growth, and prey growth plasticity.

description: The outcome of model extensions to iteroparity, predators with growth linked to prey capture, prey-size dependent predator growth, and prey growth plasticity.
DOI: 10.6084/m9.figshare.3528344.v1
title: Appendix A. The outcome of model extensions to iteroparity, predators with growth linked to prey capture, prey-size dependent predator growth, and prey growth plasticity.

description: The outcome of model extensions to iteroparity, predators with growth linked to prey capture, prey-size dependent predator growth, and prey growth plasticity.
DOI: 10.6084/m9.figshare.3528341
title: Appendix A. Notation and parameter values used in the paper.

description: Notation and parameter values used in the paper.
DOI: 10.6084/m9.figshare.3528341.v1
title: Appendix A. Notation and parameter values used in the paper.

description: Notation and parameter values used in the paper.
DOI: 10.6084/m9.figshare.3528338
title: Appendix A. Sensitivity analysis examining effects of realistic changes in assimilation efficiencies on material flows in the nutrient-enriched stream.

description: Sensitivity analysis examining effects of realistic changes in assimilation efficiencies on material flows in the nutrient-enriched stream.
DOI: 10.6084/m9.figshare.3528335
title: Appendix A. A figure showing critical densities at which a selective predator drops alternate prey as a function of prey quality.

description: A figure showing critical densities at which a selective predator drops alternate prey as a function of prey quality.
DOI: 10.6084/m9.figshare.3528335.v1
title: Appendix A. A figure showing critical densities at which a selective predator drops alternate prey as a function of prey quality.

description: A figure showing critical densities at which a selective predator drops alternate prey as a function of prey quality.
DOI: 10.6084/m9.figshare.3528332
title: Appendix B. A figure showing minimum relative energetic profitability as a function of relative preference.

description: A figure showing minimum relative energetic profitability as a function of relative preference.
DOI: 10.6084/m9.figshare.3528332.v1
title: Appendix B. A figure showing minimum relative energetic profitability as a function of relative preference.

description: A figure showing minimum relative energetic profitability as a function of relative preference.
DOI: 10.6084/m9.figshare.3528329
title: Appendix A. A description of correction factors used to estimate the number of tagged seeds moved to various distances at Indiana study sites.

description: A description of correction factors used to estimate the number of tagged seeds moved to various distances at Indiana study sites.
DOI: 10.6084/m9.figshare.3528329.v1
title: Appendix A. A description of correction factors used to estimate the number of tagged seeds moved to various distances at Indiana study sites.

description: A description of correction factors used to estimate the number of tagged seeds moved to various distances at Indiana study sites.
DOI: 10.6084/m9.figshare.3528326
title: Appendix A. Species included in synchrony analyses and their associated guilds.

description: Species included in synchrony analyses and their associated guilds.
DOI: 10.6084/m9.figshare.3528326.v1
title: Appendix A. Species included in synchrony analyses and their associated guilds.

description: Species included in synchrony analyses and their associated guilds.
DOI: 10.6084/m9.figshare.3528323
title: Appendix B. Detailed results for landscape–bird relationships.

description: Detailed results for landscape–bird relationships.
DOI: 10.6084/m9.figshare.3528323.v1
title: Appendix B. Detailed results for landscape–bird relationships.

description: Detailed results for landscape–bird relationships.
DOI: 10.6084/m9.figshare.3528320
title: Full Archive

description: Full Archive
DOI: 10.6084/m9.figshare.3528317
title: Appendix A. Sequential construction of species/ancestry abundance distributions in neutral community samples, with reference to a common migrant pool.

description: Sequential construction of species/ancestry abundance distributions in neutral community samples, with reference to a common migrant pool.
DOI: 10.6084/m9.figshare.3528317.v1
title: Appendix A. Sequential construction of species/ancestry abundance distributions in neutral community samples, with reference to a common migrant pool.

description: Sequential construction of species/ancestry abundance distributions in neutral community samples, with reference to a common migrant pool.
DOI: 10.6084/m9.figshare.3528314
title: Supplement 1. Species abundances in the 50 1-ha forest plots (Karnataka State, South India).

description: File List Supplement_abundances.txt -- tab-delimited data file for use in spreadsheets such as Excel Description The Supplement_abundances.txt file features tree species abundance in each of the 50 1-ha forest plots (Karnataka State, South India). Only trees &gt; 10 cm dbh are considered. Column definitions: numbered plot label. Ind_sp provides the number of individuals for each species over all the plots. Line definitions: numbered species label. Ind_plot provides the number of individuals in each plot. Mean_ind_sp provides the mean number of individuals per species, and Mean_ind_plot the mean number of individuals per plot.
DOI: 10.6084/m9.figshare.3528314.v1
title: Supplement 1. Species abundances in the 50 1-ha forest plots (Karnataka State, South India).

description: File List Supplement_abundances.txt -- tab-delimited data file for use in spreadsheets such as Excel Description The Supplement_abundances.txt file features tree species abundance in each of the 50 1-ha forest plots (Karnataka State, South India). Only trees &gt; 10 cm dbh are considered. Column definitions: numbered plot label. Ind_sp provides the number of individuals for each species over all the plots. Line definitions: numbered species label. Ind_plot provides the number of individuals in each plot. Mean_ind_sp provides the mean number of individuals per species, and Mean_ind_plot the mean number of individuals per plot.
DOI: 10.6084/m9.figshare.3528311
title: Appendix A. Gastropod species used to produce alarm cue.

description: Gastropod species used to produce alarm cue.
DOI: 10.6084/m9.figshare.3528311.v1
title: Appendix A. Gastropod species used to produce alarm cue.

description: Gastropod species used to produce alarm cue.
DOI: 10.6084/m9.figshare.3528308
title: Appendix B. Results from four-way ANCOVAs using genetic distance as the covariate.

description: Results from four-way ANCOVAs using genetic distance as the covariate.
DOI: 10.6084/m9.figshare.3528308.v1
title: Appendix B. Results from four-way ANCOVAs using genetic distance as the covariate.

description: Results from four-way ANCOVAs using genetic distance as the covariate.
DOI: 10.6084/m9.figshare.3528305
title: Appendix A. Differences in ambient levels of water turbidity and amount of sediment between study areas.

description: Differences in ambient levels of water turbidity and amount of sediment between study areas.
DOI: 10.6084/m9.figshare.3528305.v1
title: Appendix A. Differences in ambient levels of water turbidity and amount of sediment between study areas.

description: Differences in ambient levels of water turbidity and amount of sediment between study areas.
DOI: 10.6084/m9.figshare.3528302
title: Appendix B. List of taxa identified in the study areas.

description: List of taxa identified in the study areas.
DOI: 10.6084/m9.figshare.3528302.v1
title: Appendix B. List of taxa identified in the study areas.

description: List of taxa identified in the study areas.
DOI: 10.6084/m9.figshare.3528299
title: Appendix C. Results of SIMPER analysis.

description: Results of SIMPER analysis.
DOI: 10.6084/m9.figshare.3528299.v1
title: Appendix C. Results of SIMPER analysis.

description: Results of SIMPER analysis.
DOI: 10.6084/m9.figshare.3528296
title: Appendix D. Analyses based on Gower and Jaccard dissimilarity measures.

description: Analyses based on Gower and Jaccard dissimilarity measures.
DOI: 10.6084/m9.figshare.3528296.v1
title: Appendix D. Analyses based on Gower and Jaccard dissimilarity measures.

description: Analyses based on Gower and Jaccard dissimilarity measures.
DOI: 10.6084/m9.figshare.3528293
title: Appendix A. Photos showing mimicry of pygmy angelfishes.

description: Photos showing mimicry of pygmy angelfishes.
DOI: 10.6084/m9.figshare.3528293.v1
title: Appendix A. Photos showing mimicry of pygmy angelfishes.

description: Photos showing mimicry of pygmy angelfishes.
DOI: 10.6084/m9.figshare.3528290
title: Appendix A. Proofs 1–4.

description: Proofs 1–4.
DOI: 10.6084/m9.figshare.3528287
title: Appendix A. Mathematical derivation of conditions for substitutability in replacement series and additive experiments.

description: Mathematical derivation of conditions for substitutability in replacement series and additive experiments.
DOI: 10.6084/m9.figshare.3528287.v1
title: Appendix A. Mathematical derivation of conditions for substitutability in replacement series and additive experiments.

description: Mathematical derivation of conditions for substitutability in replacement series and additive experiments.
DOI: 10.6084/m9.figshare.3528284
title: Appendix B. Information used to reevaluate the conclusion about multiple-predator effects on prey drawn in studies that employed additive experimental designs.

description: Information used to reevaluate the conclusion about multiple-predator effects on prey drawn in studies that employed additive experimental designs.
DOI: 10.6084/m9.figshare.3528284.v1
title: Appendix B. Information used to reevaluate the conclusion about multiple-predator effects on prey drawn in studies that employed additive experimental designs.

description: Information used to reevaluate the conclusion about multiple-predator effects on prey drawn in studies that employed additive experimental designs.
DOI: 10.6084/m9.figshare.3528281
title: Appendix C. Ecological conditions (predator species habitat domain and hunting mode, and prey habitat domain) in experimental studies of multiple-predator effects conducted under field conditions.

description: Ecological conditions (predator species habitat domain and hunting mode, and prey habitat domain) in experimental studies of multiple-predator effects conducted under field conditions.
DOI: 10.6084/m9.figshare.3528281.v1
title: Appendix C. Ecological conditions (predator species habitat domain and hunting mode, and prey habitat domain) in experimental studies of multiple-predator effects conducted under field conditions.

description: Ecological conditions (predator species habitat domain and hunting mode, and prey habitat domain) in experimental studies of multiple-predator effects conducted under field conditions.
DOI: 10.6084/m9.figshare.3528278
title: Supplement 1. SAS code containing the algorithms described in our paper.

description: File List Power trends grouped counts analytical.sas -- SAS code. Power trends grouped counts simulation.sas -- SAS code. Description Power trends grouped counts analytical.sas uses the analytical method described in the main article for approximating standard errors, precision, and power associated with detecting trends across grouped count data. Power trends grouped counts simulation.sas uses simulations and repeated calls to a nonlinear mixed model to estimate power to detect trends across grouped count data. Parameters are defined at the bottom of the macro. Both files must be run using SAS statistical software. Further details are provided in the macros, and in the original paper.
DOI: 10.6084/m9.figshare.3528275
title: Appendix A. Derivation of Brownian bridge probability distribution when location errors are normally distributed.

description: Derivation of Brownian bridge probability distribution when location errors are normally distributed.