cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.bm88a4
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cephalotes persimilis De Andrade, 1999"
 ]
}

 The dataset includes 48 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024575-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13766275
title: Alphafold2_ab_initio iterative predictions for folding intermediate identification

description: Iterative structure predictions for protein PDB ids starts from 6.
DOI: 10.5281/zenodo.13766276
title: Alphafold2_ab_initio iterative predictions for folding intermediate identification

description: Iterative structure predictions for protein PDB ids starts from 6.
DOI: 10.5281/zenodo.10418435
title: scSNV-seq data and code

description: Processed data and code from base editing and scSNV-seq experiments.

The code has been deposited on GitHub (https://github.com/MarioniLab/scSNV-seq). 
description: This research was funded by the Wellcome Trust Grant 206194 and Open Targets (OTAR2061). M.S. is supported by the Wellcome Trust (220442/Z/20/Z).
DOI: 10.5281/zenodo.13820037
title: scSNV-seq data and code

description: Processed data and code from base editing and scSNV-seq experiments. This is a small update to the previous version, adding the files features_genotyped_experiment.tsv, features_non_genotyped_experiment.tsv, barcodes_genotyped_experiment.tsv, barcodes_non_genotyped_experiment.tsv. These data had already been available as part of the respective SingleCellExperiments in the previous commit. The tsv files have now been added to improve accessibility to the data without the requirement of using R. 

The code has been deposited on GitHub (https://github.com/MarioniLab/scSNV-seq). 
description: This research was funded by the Wellcome Trust Grant 206194 and Open Targets (OTAR2061). M.S. is supported by the Wellcome Trust (220442/Z/20/Z).
DOI: 10.5281/zenodo.13820196
title: scSNV-seq data and code

description: Processed data and code from base editing and scSNV-seq experiments. This is a small update to the previous version, adding the files features_genotyped_experiment.tsv, features_non_genotyped_experiment.tsv, barcodes_genotyped_experiment.tsv, barcodes_non_genotyped_experiment.tsv. These data had already been available as part of the respective SingleCellExperiments in the previous commit. The tsv files have now been added to improve accessibility to the data without the requirement of using R. 

The code has been deposited on GitHub (https://github.com/MarioniLab/scSNV-seq). 
description: This research was funded by the Wellcome Trust Grant 206194 and Open Targets (OTAR2061). M.S. is supported by the Wellcome Trust (220442/Z/20/Z).
DOI: 10.5281/zenodo.7941285
title: scSNV-seq data and code

description: Processed data and code from base editing and scSNV-seq experiments. This is a small update to the previous version, adding the files features_genotyped_experiment.tsv, features_non_genotyped_experiment.tsv, barcodes_genotyped_experiment.tsv, barcodes_non_genotyped_experiment.tsv. These data had already been available as part of the respective SingleCellExperiments in the previous commit. The tsv files have now been added to improve accessibility to the data without the requirement of using R. 

The code has been deposited on GitHub (https://github.com/MarioniLab/scSNV-seq). 
description: This research was funded by the Wellcome Trust Grant 206194 and Open Targets (OTAR2061). M.S. is supported by the Wellcome Trust (220442/Z/20/Z).
DOI: 10.5281/zenodo.7941286
title: scSNV-seq data

description: Processed data from base editing and scSNV-seq experiments. Code has been deposited on GitHub (https://github.com/MarioniLab/scSNPseq). 
description: This research was funded by the Wellcome Trust Grant 206194 and Open Targets (OTAR2061). M.S. is supported by the Wellcome Trust (220442/Z/20/Z).
DOI: 10.15468/dl.4qvjg5
title: Occurrence Download

description: A dataset listing the 209 species recorded in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((1.23991 41.14504,1.24549 41.14454,1.24545 41.14745,1.23998 41.1477,1.2396 41.14526,1.23991 41.14504))"
 ]
}

 The dataset's 209 records were derived from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024566-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27075177
title: Development of an ultrasound-mediated nano-sized drug-delivery system for cancer treatment: from theory to experiment

description: <b>Aim:</b> To establish a methodology for understanding how ultrasound (US) induces drug release from nano-sized drug-delivery systems (NSDDSs) and enhances drug penetration and uptake in tumors. This aims to advance cancer treatment strategies. <b>Materials & methods:</b> We developed a multi-physics mathematical model to elucidate and understand the intricate mechanisms governing drug release, transport and delivery. Unique <i>in vitro</i> models (monolayer, multilayer, spheroid) and a tailored US exposure setup were introduced to evaluate drug penetration and uptake. <b>Results:</b> The results highlight the potential advantages of US-mediated NSDDSs over conventional NSDDSs and chemotherapy, notably in enhancing drug release and inducing cell death. <b>Conclusion:</b> Our sophisticated numerical and experimental methods aid in determining and quantifying drug penetration and uptake into solid tumors. Therapeutic ultrasound (TUS) permits targeted drug delivery by controlling the drug-release kinetics, thereby enhancing drug delivery and cell killing in tumors. Our study enabled a comprehensive understanding of the integration of TUS and nano-sized drug-delivery systems by combining experimental and theoretical analyses. We introduced a multi-scale and multi-physics mathematical and computational model for the penetration of TUS-triggered nano-sized drug-delivery systems into solid tumors. We examined three <i>in vitro</i> cancer cell culture methods – 2D monolayer, 3D spheroids and 3D multi-layer cells – to analyze initial cell toxicity, antiproliferative capacity and drug penetration. A customized experimental setup was developed that was suitable for TUS (i.e., LIPUS) and cell studies. The synergies between TUS, drug-release kinetics and transport characteristics were explored to increase the rate of cancer cell death. We proposed an optical sectioning technique for drug-penetration studies and utilized flow cytometry analysis for cell proliferation studies in a spheroid cancer cell model. Drug-release kinetics were determined with and without ultrasound exposure at 37°C.
DOI: 10.6084/m9.figshare.27075177.v1
title: Development of an ultrasound-mediated nano-sized drug-delivery system for cancer treatment: from theory to experiment

description: <b>Aim:</b> To establish a methodology for understanding how ultrasound (US) induces drug release from nano-sized drug-delivery systems (NSDDSs) and enhances drug penetration and uptake in tumors. This aims to advance cancer treatment strategies. <b>Materials & methods:</b> We developed a multi-physics mathematical model to elucidate and understand the intricate mechanisms governing drug release, transport and delivery. Unique <i>in vitro</i> models (monolayer, multilayer, spheroid) and a tailored US exposure setup were introduced to evaluate drug penetration and uptake. <b>Results:</b> The results highlight the potential advantages of US-mediated NSDDSs over conventional NSDDSs and chemotherapy, notably in enhancing drug release and inducing cell death. <b>Conclusion:</b> Our sophisticated numerical and experimental methods aid in determining and quantifying drug penetration and uptake into solid tumors. Therapeutic ultrasound (TUS) permits targeted drug delivery by controlling the drug-release kinetics, thereby enhancing drug delivery and cell killing in tumors. Our study enabled a comprehensive understanding of the integration of TUS and nano-sized drug-delivery systems by combining experimental and theoretical analyses. We introduced a multi-scale and multi-physics mathematical and computational model for the penetration of TUS-triggered nano-sized drug-delivery systems into solid tumors. We examined three <i>in vitro</i> cancer cell culture methods – 2D monolayer, 3D spheroids and 3D multi-layer cells – to analyze initial cell toxicity, antiproliferative capacity and drug penetration. A customized experimental setup was developed that was suitable for TUS (i.e., LIPUS) and cell studies. The synergies between TUS, drug-release kinetics and transport characteristics were explored to increase the rate of cancer cell death. We proposed an optical sectioning technique for drug-penetration studies and utilized flow cytometry analysis for cell proliferation studies in a spheroid cancer cell model. Drug-release kinetics were determined with and without ultrasound exposure at 37°C.
DOI: 10.5281/zenodo.13820103
title: New Outlooks on Backdoor Attacks for Fake Speech Detection
DOI: 10.5281/zenodo.13820104
title: New Outlooks on Backdoor Attacks for Fake Speech Detection
DOI: 10.15468/dl.xwguwa
title: Occurrence Download

description: A dataset containing 56415 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-7.89809 43.93445,-9.28118 43.27757,-9.534 42.98453,-9.23656 42.2513,-9.01348 41.73179,-8.35912 42.04179,-8.3145 41.86483,-8.19553 41.74289,-7.86834 41.72069,-7.33296 41.73179,-6.67859 41.88698,-6.52987 43.64459,-7.34783 43.82726,-7.89809 43.93445))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Anas acuta Linnaeus, 1758, Ardea cinerea Linnaeus, 1758, Egretta garzetta (Linnaeus, 1766), Circus pygargus (Linnaeus, 1758), Circus cyaneus (Linnaeus, 1766), Coturnix coturnix (Linnaeus, 1758))",
 "Year 2013-2023"
 ]
}

 The dataset includes 56415 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024576-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13766281
title: Alphafold2_ab_initio iterative predictions for folding intermediate identification

description: Iterative structure predictions for protein PDB ids starts from 3.
DOI: 10.5281/zenodo.13766282
title: Alphafold2_ab_initio iterative predictions for folding intermediate identification

description: Iterative structure predictions for protein PDB ids starts from 3.
DOI: 10.15468/dl.v33wv7
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Prionodon Horsfield, 1822"
 ]
}

 The dataset includes 76 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024577-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57830/2303081
title: White-tailed Deer Monitoring for the Heartland Inventory and Monitoring Network: 2005-2023 - Data Package

description: This dataset consists of occurrence observations for white-tailed deer in the National Park Service Heartland Inventory and Monitoring Network Parks. Because of their impacts on vegetation, disease transmission, visitor health, and vehicle-deer collisions, park managers at Arkansas Post National Memorial, Pea Ridge National Military Park, and Wilson’s Creek National Battlefield identified white-tailed deer as a vital sign for monitoring. Monitoring white-tailed deer populations better positions park management to take action to mitigate concerns involving deer. The overall goals of HTLN white-tailed deer monitoring are to 1) document annual changes in the number of white-tailed deer, as changes could signal presence of illegal deer harvest, disease, or other acute factors of concern for park management; 2) document long-term trends in the number of white-tailed deer to help park management determine if measures need to be taken to maintain herd health, minimize vegetation damage within a park, or alleviate visitor health concerns; and 3) annually map locations of white-tailed deer observed to assist park management in assessing the influences of management actions on deer usage of an area, habitat type, etc.
DOI: 10.15468/dl.e8hgay
title: Occurrence Download

description: A dataset containing 249 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Base de datos de la Sala de Colecciones Biológicas de la Universidad Católica del Norte (SCBUCN) Chile",
 "TaxonKey is Echinoidea"
 ]
}

 The dataset includes 249 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024578-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pfvfjx
title: Occurrence Download

description: A dataset containing 269 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Crotalaria incana L."
 ]
}

 The dataset includes 269 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024579-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tsy2tm
title: Occurrence Download

description: A dataset listing the 10 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Switzerland",
 "DatasetKey is Swiss National Cicadidae Databank",
 "GadmGid is CHE"
 ]
}

 The dataset's 10 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024568-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18120/shq4-9448
title: Automated SOZ Detection
DOI: 10.15468/dl.dfvh98
title: Occurrence Download

description: A dataset listing the 246 species recorded in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Swiss National Butterflies and Forester Moths Databank",
 "GadmGid is CHE"
 ]
}

 The dataset's 246 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024573-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wxejgx
title: Occurrence Download

description: A dataset containing 7030 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Plethodon teyahalee Hairston, 1950"
 ]
}

 The dataset includes 7030 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024580-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2544q6
title: CCDC 1999987: Experimental Crystal Structure Determination

description: Related Article: Matthias Hempe, Alastair K. Harrison, Jonathan S. Ward, Andrei S. Batsanov, Mark A. Fox, Fernando B. Dias, Martin R. Bryce|2021|J.Org.Chem.|86|429|doi:10.1021/acs.joc.0c02174
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gv7p8
title: CCDC 2289340: Experimental Crystal Structure Determination

description: Related Article: Jennifer Kuziola, Nils Nöthling, Josep Cornella|2023|CSD Communication|||
description: Related Article: Jennifer Kuziola, Nils Nöthling, Markus Leutzsch, Josep Cornella|2024|Chem.Commun.|60|10532|doi:10.1039/D4CC03364G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gv7sc
title: CCDC 2289343: Experimental Crystal Structure Determination

description: Related Article: Jennifer Kuziola, Nils Nöthling, Josep Cornella|2023|CSD Communication|||
description: Related Article: Jennifer Kuziola, Nils Nöthling, Markus Leutzsch, Josep Cornella|2024|Chem.Commun.|60|10532|doi:10.1039/D4CC03364G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h2zwg
title: CCDC 2296786: Experimental Crystal Structure Determination

description: Related Article: Jennifer Kuziola, Nils Nöthling, Josep Cornella|2023|CSD Communication|||
description: Related Article: Jennifer Kuziola, Nils Nöthling, Markus Leutzsch, Josep Cornella|2024|Chem.Commun.|60|10532|doi:10.1039/D4CC03364G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h2zxh
title: CCDC 2296787: Experimental Crystal Structure Determination

description: Related Article: Jennifer Kuziola, Nils Nöthling, Josep Cornella|2023|CSD Communication|||
description: Related Article: Jennifer Kuziola, Nils Nöthling, Markus Leutzsch, Josep Cornella|2024|Chem.Commun.|60|10532|doi:10.1039/D4CC03364G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.18112/openneuro.ds005503.v1.0.1
title: In silico discovery of representational relationships across visual cortex
DOI: 10.15468/dl.d34xse
title: Occurrence Download

description: A dataset containing 34608 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-7.89809 43.93445,-9.28118 43.27757,-9.534 42.98453,-9.23656 42.2513,-9.01348 41.73179,-8.35912 42.04179,-8.3145 41.86483,-8.19553 41.74289,-7.86834 41.72069,-7.33296 41.73179,-6.67859 41.88698,-6.52987 43.64459,-7.34783 43.82726,-7.89809 43.93445))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Mareca penelope (Linnaeus, 1758), Mareca strepera (Linnaeus, 1758), Platalea leucorodia Linnaeus, 1758, Pandion haliaetus (Linnaeus, 1758), Larus marinus Linnaeus, 1758, Falco peregrinus Tunstall, 1771)",
 "Year 2013-2023"
 ]
}

 The dataset includes 34608 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024581-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ew2eg
title: Occurrence Download

description: A dataset containing 1451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cynanchum thesioides (Freyn) K.Schum."
 ]
}

 The dataset includes 1451 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024583-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ca9u2n
title: Occurrence Download

description: A dataset containing 15584 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Plethodon jordani Blatchley, 1901"
 ]
}

 The dataset includes 15584 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024584-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.22090697
title: Daymet_forcings_CAMELS

description: Only for use with the macrosheds R package
DOI: 10.6084/m9.figshare.22090697.v4
title: Daymet_forcings_CAMELS

description: Only for use with the macrosheds R package
DOI: 10.15468/dl.gsuvd7
title: Occurrence Download

description: A dataset containing 17292 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (South America, North America)",
 "TaxonKey is Tayassu pecari (Link, 1795)"
 ]
}

 The dataset includes 17292 records from 141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024585-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fwa5um
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Liberiictis kuhni Hayman, 1958"
 ]
}

 The dataset includes 22 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024586-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rvum6q
title: Occurrence Download

description: A dataset containing 848948 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Oceania",
 "TaxonKey is Cyperaceae"
 ]
}

 The dataset includes 848948 records from 263 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024572-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-73762
title: Redemption tidings, vol. 53, nos. 1-52, 1 Jan. - 29 Dec. 1977

description: [description english/roman)] Issued weekly. "The vital voice of pentecost today" -- subtitle.
DOI: 10.15468/dl.nfzfnk
title: Occurrence Download

description: A dataset containing 501 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phacelia popei Torr. & A.Gray"
 ]
}

 The dataset includes 501 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072242-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9p76r2
title: Occurrence Download

description: A dataset containing 198 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Draco beccarii Peters & Doria, 1878"
 ]
}

 The dataset includes 198 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069019-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.