cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19446917.v2
title: Transcriptome Profiling of a Common Mistletoe Species Parasitizing Four Typical Host Species in Urban Southwest China

description: Comparing gene expression among parasitic plants infecting different host species can have significant implications for understanding host-parasite interactions. <i>Taxillus nigrans</i> is a common hemiparasitic species in Southwest China that parasitizes a variety of host species. However, a lack of nucleotide sequence data to date has hindered transcriptome-level research on <i>T</i>.<i> nigrans</i>. In this study, the transcriptomes of <i>T. nigrans</i> individuals parasitizing four typical host species (<i>Broussonetia papyrifera</i> [Bpap] a broad-leaved tree species; <i>Cryptomeria fortunei </i>[Cfor] a coniferous tree species; <i>Cinnamomum septentrionale </i>[Csep] an evergreen tree species; and<i> Ginkgo biloba</i> [Gbil] a deciduous-coniferous tree species) were sequenced, and the expression profiles and metabolic pathways compared among hosts. A total of 40.06 Gb of clean sequence data were generated in nine cDNA libraries. These were <i>de novo</i> assembled into 293,823 transcripts with an N50 value of 1,790 bp. A large number of differentially expressed genes (DEGs) were identified when comparing <i>T. nigrans</i> individuals on different host species: Bpap vs. Cfor (713 DEGs), Bpap vs. Csep (1,219), Bpap vs. Gbil (1,514), Cfor vs. Csep (1,639), Cfor vs. Gbil (1,722), and Csep vs. Gbil (1,723). Three hundred and eighty-one unigenes were common to all six pairwise comparisons; these were primarily associated with carbohydrate metabolism and energy metabolism, as determined in a KEGG enrichment analysis. Specific involvements included: the TCA cycle, biosynthesis of secondary metabolites, carbon metabolism, biosynthesis of amino acids and glyoxylate/dicarboxylate metabolism. A total of 251 unique unigenes were also identified, specific to either the Bpap vs. Cfor (249 unigenes) or Csep vs. Gbil (two unigenes) comparisons; partial unigenes were associated with the plasma membrane, response to endogenous stimuli, ion binding, and organic hydroxy compound metabolic processes. These results provide a foundation for further explorations of the detailed molecular mechanisms involved in plant parasitism.
DOI: 10.6084/m9.figshare.19446917.v1
title: Transcriptome Profiling of a Common Mistletoe Species Parasitizing Four Typical Host Species in Urban Southwest China

description: Comparing gene expression among parasitic plants infecting different host species can have significant implications for understanding host-parasite interactions. <i>Taxillus nigrans</i> is a common hemiparasitic species in Southwest China that parasitizes a variety of host species. However, a lack of nucleotide sequence data to date has hindered transcriptome-level research on <i>T</i>.<i> nigrans</i>. In this study, the transcriptomes of <i>T. nigrans</i> individuals parasitizing four typical host species (<i>Broussonetia papyrifera</i> [Bpap] a broad-leaved tree species; <i>Cryptomeria fortunei </i>[Cfor] a coniferous tree species; <i>Cinnamomum septentrionale </i>[Csep] an evergreen tree species; and<i> Ginkgo biloba</i> [Gbil] a deciduous-coniferous tree species) were sequenced, and the expression profiles and metabolic pathways compared among hosts. A total of 40.06 Gb of clean sequence data were generated in nine cDNA libraries. These were <i>de novo</i> assembled into 293,823 transcripts with an N50 value of 1,790 bp. A large number of differentially expressed genes (DEGs) were identified when comparing <i>T. nigrans</i> individuals on different host species: Bpap vs. Cfor (713 DEGs), Bpap vs. Csep (1,219), Bpap vs. Gbil (1,514), Cfor vs. Csep (1,639), Cfor vs. Gbil (1,722), and Csep vs. Gbil (1,723). Three hundred and eighty-one unigenes were common to all six pairwise comparisons; these were primarily associated with carbohydrate metabolism and energy metabolism, as determined in a KEGG enrichment analysis. Specific involvements included: the TCA cycle, biosynthesis of secondary metabolites, carbon metabolism, biosynthesis of amino acids and glyoxylate/dicarboxylate metabolism. A total of 251 unique unigenes were also identified, specific to either the Bpap vs. Cfor (249 unigenes) or Csep vs. Gbil (two unigenes) comparisons; partial unigenes were associated with the plasma membrane, response to endogenous stimuli, ion binding, and organic hydroxy compound metabolic processes. These results provide a foundation for further explorations of the detailed molecular mechanisms involved in plant parasitism.
DOI: 10.21227/7c17-7112
title: Dragon Fruit Image Dataset

description: We created a 2563-image custom dragon fruit image dataset, with 1248 images of raw dragon fruits and 1315 photographs of ripe dragon fruits. The images were taken with the Nikon D5200 DSLR and OnePlus 6's Sony IMX 519 16 megapixel camera. The photographs taken with the DSLR camera had a resolution of 4000 by 6000 pixels, while those taken with the OnePlus6 had a resolution of 3456 by 4608 pixels. They were photographed in natural sunlight. The average temperature during that time was 28°C (84.2°F), with partly sunny skies, 65 percent humidity, and 17 km/h wind speeds. The images were captured between the end of June and the middle of July 2021 at a dragon fruit farm in Baramati, Maharashtra, India. We collected data at both ends of the dragon fruit growth cycle, which lasts about a month from flowering to harvest.
DOI: 10.3886/e157781v1-121060
title: Data and Code for: Rebel on the Canal: Rebel on the Canal: Disrupted Trade Access and Social Conflict in China, 1650-1911

description: This paper examines the effects of the abandonment of China's Grand Canal --- the world's largest and oldest artificial waterway --- which served as a disruption to regional trade access. Using an original dataset covering 575 counties over 262 years, we show that the canal's abandonment contributed to the social turmoil that engulfed North China in the nineteenth century. Counties along the canal experienced an additional 117% increase in rebelliousness after the canal's closure relative to their non-canal counterparts. Our findings highlight the important role that continued access to trade routes plays in reducing conflict.
description: Counties in Zhili, Shandong, Henan, Anhui, Zhejiang, and Jiangsu provinces as of 1820. Smallest Geographic Unit: county
DOI: 10.5517/ccdc.csd.cc2btvvw
title: CCDC 2169809: Experimental Crystal Structure Determination

description: Related Article: David R. Manke, James A. Golen, Cary R. Stennett, Marilyn Naeem, Diego R. Javier-Jimenez, Philip P. Power|2022|Polyhedron|222|115947|doi:10.1016/j.poly.2022.115947
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bfln1
title: CCDC 2158023: Experimental Crystal Structure Determination

description: Related Article: J. August Ridenour, William A. Maza, Brian L. Chaloux, Albert Epshteyn|2022|Inorg.Chem.|61|8834|doi:10.1021/acs.inorgchem.2c00833
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bflp2
title: CCDC 2158024: Experimental Crystal Structure Determination

description: Related Article: J. August Ridenour, William A. Maza, Brian L. Chaloux, Albert Epshteyn|2022|Inorg.Chem.|61|8834|doi:10.1021/acs.inorgchem.2c00833
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bflq3
title: CCDC 2158025: Experimental Crystal Structure Determination

description: Related Article: J. August Ridenour, William A. Maza, Brian L. Chaloux, Albert Epshteyn|2022|Inorg.Chem.|61|8834|doi:10.1021/acs.inorgchem.2c00833
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bflr4
title: CCDC 2158026: Experimental Crystal Structure Determination

description: Related Article: J. August Ridenour, William A. Maza, Brian L. Chaloux, Albert Epshteyn|2022|Inorg.Chem.|61|8834|doi:10.1021/acs.inorgchem.2c00833
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bflt6
title: CCDC 2158028: Experimental Crystal Structure Determination

description: Related Article: J. August Ridenour, William A. Maza, Brian L. Chaloux, Albert Epshteyn|2022|Inorg.Chem.|61|8834|doi:10.1021/acs.inorgchem.2c00833
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bflw8
title: CCDC 2158030: Experimental Crystal Structure Determination

description: Related Article: J. August Ridenour, William A. Maza, Brian L. Chaloux, Albert Epshteyn|2022|Inorg.Chem.|61|8834|doi:10.1021/acs.inorgchem.2c00833
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bflx9
title: CCDC 2158031: Experimental Crystal Structure Determination

description: Related Article: J. August Ridenour, William A. Maza, Brian L. Chaloux, Albert Epshteyn|2022|Inorg.Chem.|61|8834|doi:10.1021/acs.inorgchem.2c00833
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bflyb
title: CCDC 2158032: Experimental Crystal Structure Determination

description: Related Article: J. August Ridenour, William A. Maza, Brian L. Chaloux, Albert Epshteyn|2022|Inorg.Chem.|61|8834|doi:10.1021/acs.inorgchem.2c00833
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bfls5
title: CCDC 2158027: Experimental Crystal Structure Determination

description: Related Article: J. August Ridenour, William A. Maza, Brian L. Chaloux, Albert Epshteyn|2022|Inorg.Chem.|61|8834|doi:10.1021/acs.inorgchem.2c00833
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bflv7
title: CCDC 2158029: Experimental Crystal Structure Determination

description: Related Article: J. August Ridenour, William A. Maza, Brian L. Chaloux, Albert Epshteyn|2022|Inorg.Chem.|61|8834|doi:10.1021/acs.inorgchem.2c00833
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bxjmf
title: CCDC 2172375: Experimental Crystal Structure Determination

description: Related Article: Zhineng Qing, Peng Mao, Tie Wang, Hongbin Zhai|2022|J.Am.Chem.Soc.|144|10640|doi:10.1021/jacs.2c03978
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.34740/kaggle/dsv/3823635
title: YouTube Daily
DOI: 10.5281/zenodo.6659253
title: A database of Chemical Science institutions and industries in Kerala

description: We developed this database to identify sampling units (entities related to Chemical Science education and career in Kerala) for the study 'Women’s Career Pathway in Chemical Sciences; a Multi-stage Investigation in Kerala' using two approaches: Using search engines and visiting official databases of government departments and institutional websites. By asking faculties, researchers and students in the Chemical Science field to supplement the list generated by the first approach. We hope that this database will be useful for researchers in the field and students who wish to pursue their careers in Chemical Sciences. <em>All authors contributed equally to this work.</em> <em>This research is supported by the Royal Society of Chemistry Inclusion and Diversity Fund, 2020</em>
DOI: 10.5281/zenodo.6659252
title: A database of Chemical Science institutions and industries in Kerala

description: We developed this database to identify sampling units (entities related to Chemical Science education and career in Kerala) for the study 'Women’s Career Pathway in Chemical Sciences; a Multi-stage Investigation in Kerala' using two approaches: Using search engines and visiting official databases of government departments and institutional websites. By asking faculties, researchers and students in the Chemical Science field to supplement the list generated by the first approach. We hope that this database will be useful for researchers in the field and students who wish to pursue their careers in Chemical Sciences. <em>All authors contributed equally to this work.</em> <em>This research is supported by the Royal Society of Chemistry Inclusion and Diversity Fund, 2020</em>
DOI: 10.6084/m9.figshare.20097674
title: Focus Group Discussion transcripts - BIVA Malawi project

description: English transcripts from focus group discussions with healthcare workers in Malawi, on the use, opportunities and challenges for Bioelectrical Impedance Vector Analysis in children.
DOI: 10.6084/m9.figshare.20097674.v1
title: Focus Group Discussion transcripts - BIVA Malawi project

description: English transcripts from focus group discussions with healthcare workers in Malawi, on the use, opportunities and challenges for Bioelectrical Impedance Vector Analysis in children.
DOI: 10.5281/zenodo.6659483
title: SoftwareThatMatters - Analyzing the effect of introducing time as a component in Python dependency graphs

description: This is a data set produced as a result of the research conducted during my bachelor thesis project "Analyzing the effect of introducing time as a component in Python dependency graphs". This set contains 3 parts: The raw data that was gathered in order to be processed. The processed data that was used for the construction of the graph. The results that were produced during this research. More information can be found on the repository of this research project: SoftwareThatMatters
DOI: 10.5281/zenodo.6659482
title: SoftwareThatMatters - Analyzing the effect of introducing time as a component in Python dependency graphs

description: This is a data set produced as a result of the research conducted during my bachelor thesis project "Analyzing the effect of introducing time as a component in Python dependency graphs". This set contains 3 parts: The raw data that was gathered in order to be processed. The processed data that was used for the construction of the graph. The results that were produced during this research. More information can be found on the repository of this research project: SoftwareThatMatters
DOI: 10.5281/zenodo.6659509
title: PlacentaSR

description: <strong>Dataset for Resolution enhancement of placenta histological images using deep learning</strong>
DOI: 10.5281/zenodo.6659508
title: PlacentaSR

description: <strong>Dataset for Resolution enhancement of placenta histological images using deep learning</strong>
DOI: 10.34740/kaggle/dsv/3823977
title: UNET Lung Segmentation Weights for Chest X Rays
DOI: 10.3886/e120128v1-121080
title: Data and Code for: The effect of leaded gasoline on elderly mortality: Evidence from regulatory exemptions

description: Leaded gasoline is still used globally for aviation and automotive racing. Exploiting regulatory exemptions and a novel quasi-experiment, we find that leaded gasoline use in racing increases ambient lead, elevated blood lead rates, and elderly mortality. The mortality estimates indicate that each gram of lead added to gasoline exceeds $1,100 in damages. Our setting allows us to rule out potential confounders, such as correlated pollutants or socioeconomic status. We provide the first causal estimates linking adult mortality to leaded gasoline, highlight the value of banning on-road leaded gasoline, and present policy-relevant cost estimates at the lowest ambient levels to date.
DOI: 10.6084/m9.figshare.17819708.v1
title: Supplementary materials (Human Maverick)

description: These supplementary materials include the Appendix, Supplementary Excel file and the multiple sequence alignments used for phylogenetic analysis. <br>
DOI: 10.6084/m9.figshare.20009492
title: On farm Performances Evaluation and Sustainability Challenges of Tropically adopted Exotic Chicken breeds in Northwest Ethiopia

description: data with spss
DOI: 10.6084/m9.figshare.20009492.v2
title: On farm Performances Evaluation and Sustainability Challenges of Tropically adopted Exotic Chicken breeds in Northwest Ethiopia

description: data with spss
DOI: 10.6084/m9.figshare.20009492.v1
title: On farm Performances Evaluation and Sustainability Challenges of Tropically adopted Exotic Chicken breeds in Northwest EthiopiaOn farm Performances Evaluation and Sustainability Challenges of Tropically adopted Exotic Chicken breeds in Northwest Ethiopia

description: data with spss
DOI: 10.34740/kaggle/dsv/3824152
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.34740/kaggle/dsv/3824176
title: 2021 World Population (updated daily)
DOI: 10.5281/zenodo.6659650
title: Data Archive for Phosphorylation of SAMHD1 Thr592 increases C-terminal domain dynamics, tetramer dissociation, and ssDNA binding kinetics

description: This archive contains all data communicated in the indicated publication.
description: Funding by National Institutes of Health grants R01GM056834 and R01CA233567 (JTS); AHA predoctoral fellowship 835076 (BO); and NCI Training grant T32CA009110
DOI: 10.5281/zenodo.6659649
title: Data Archive for Phosphorylation of SAMHD1 Thr592 increases C-terminal domain dynamics, tetramer dissociation, and ssDNA binding kinetics

description: This archive contains all data communicated in the indicated publication.
description: Funding by National Institutes of Health grants R01GM056834 and R01CA233567 (JTS); AHA predoctoral fellowship 835076 (BO); and NCI Training grant T32CA009110
DOI: 10.6084/m9.figshare.20097800
title: Data for paper - Impact of transactional and transformational leadership on social, operational, and environmental performance

description: This dataset contains three files: 1. Model outputs for reliability and validity, and excel is required to open. 2. Survey used, and Word is required to open it. 3. The model and WarpPLS 7 is required to open it.
DOI: 10.6084/m9.figshare.20097800.v1
title: Data for paper - Impact of transactional and transformational leadership on social, operational, and environmental performance

description: This dataset contains three files: 1. Model outputs for reliability and validity, and excel is required to open. 2. Survey used, and Word is required to open it. 3. The model and WarpPLS 7 is required to open it.
DOI: 10.25934/pr00007921
title: Stan Request dummy GSK data 6/18

description: This is just a test of the system
DOI: 10.6084/m9.figshare.19418961
title: A Simple Secretion Assay for Assessing New and Existing Myocilin Variants

description: A lack of sufficient functional information exists for appropriately categorizing a large number of myocilin (MYOC) variants and their involvement in primary open angle glaucoma, hindering their clinical significance classification. Most glaucoma-causing MYOC mutations result in protein non-secretion and intracellular insoluble aggregate formation in cultured cells. Herein, we generated a <i>Gaussia</i> luciferase-based MYOC fusion protein to quickly and sensitively track the secretion of MYOC variants and compared these results to the better-established western blotting assay for MYOC. Fourteen clinically-derived MYOC variants with varying degrees of predicted pathogenicity were transfected into HEK-293A cells and analyzed by either a luciferase assay or western blotting. Eight of the variants (G12R, V53A, T204T, P254L, T325T, D380H, D395_E396insDP, and P481S) had not been biochemically assessed previously. Of these, P254L and D395_E396insDP demonstrated significant secretion defects reminiscent of glaucoma-causing mutations. The luciferase assay results agreed with western blotting for thirteen of the fourteen variants (93%), suggesting a strong concordance. These results suggest that the <i>Gaussia</i> luciferase assay may be used as a complementary or standalone assay for quickly assessing MYOC variant behavior and we anticipate that these results will be useful in MYOC variant curation and reclassification.