cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22494389.v1
title: DNA methylome and transcriptome profiling reveal key electrophysiology and immune dysregulation in hypertrophic cardiomyopathy

description: Hypertrophic cardiomyopathy (HCM) is the most common inherited heart disease. However, a detailed DNA methylation (DNAme) landscape has not yet been elucidated. Our study combined DNAme and transcriptome profiles for HCM myocardium and identify aberrant DNAme associated with altered myocardial function in HCM. The transcription of methylation-related genes did not significantly differ between HCM and normal myocardium. Nevertheless, the former had an altered DNAme profile compared with the latter. The hypermethylated and hypomethylated sites in HCM tissues had chromosomal distributions and functional enrichment of correlated genes differing from those of their normal tissue counterparts. The GO analysis of network underlying the genes correlated with DNAme alteration and differentially expressed genes (DEGs) shows functional clusters centred on immune cell function and muscle system processes. In KEGG analysis, only the calcium signalling pathway was enriched either by the genes correlated with changes in DNAme or DEGs. The protein-protein interactions (PPI) underlying the genes altered at both the DNAme and transcriptional highlighted two important functional clusters. One of these was related to the immune response and had the estrogen receptor-encoding <i>ESR1</i> gene as its node. The other cluster comprised cardiac electrophysiology-related genes. Intelliectin-1 (<i>ITLN1</i>), a component of the innate immune system, was transcriptionally downregulated in HCM and had a hypermethylated site within 1500 bp upstream of the <i>ITLN1</i> transcription start site. Estimates of immune infiltration demonstrated a relative decline in immune cell population diversity in HCM. A combination of DNAme and transcriptome profiles may help identify and develop new therapeutic targets for HCM.
DOI: 10.5281/zenodo.10727286
title: Candidate cluster-scale gravitationally lensed quasars from CluMPR and DESI Legacy Survey

description: Candidate cluster-scale strongly-lensed quasars from DESI Legacy Survey (DESI QSO targets) and CluMPR DESI Legacy Survey galaxy cluster catalog. 


Paper decribing the CluMPR galaxy cluster catalogs and candidate lensed quasar catalogs: The CluMPR Galaxy Cluster-Finding Algorithm and DESI Legacy Survey Galaxy Cluster catalogue (M. J. Yantovski-Barth et al.)


Description: 


To search for lensed quasars, we use two Einstein radii: one corresponds to wide angle lensing by the entire cluster (𝑀 = 10^15 𝑀⊙ ), and the other corresponds to lensing by the core of the cluster (𝑀 = 0.25 ∗ 10^15 𝑀⊙ ).


We use the colors in bands g-r, g-z, and r-W1 to evaluate candidate lensed quasars. If at least two quasars are within 1 magnitude of each other in all 3 colors, we rate the candidate at Grade C. If at least three quasars are within 1 magnitude of each other in all 3 colors, we rate the the candidate at Grade B. If either 4 quasars or two combinations of 3 quasars are within 1 magnitude of each other in all 3 colors, we rate the candidate as Grade A.
DOI: 10.5281/zenodo.8157752
title: The CluMPR Galaxy Cluster Catalogue for DESI Legacy Survey DR9

description: Galaxy cluster catalog and cluster member galaxy catalogs compiled using the CluMPR cluster-finding algorithm. Paper decribing the CluMPR algorithms and cluster catalogs: The CluMPR Galaxy Cluster-Finding Algorithm and DESI Legacy Survey Galaxy Cluster catalogue (M. J. Yantovski-Barth et al.) File description: CLUMPR_DESI contains the official cluster catalog, CLUMPR_DESI_extended is the official cluster catalog + some clusters which were flagged and removed. north_members_final_2023 contains the member galaxies for clusters in the north region of DESI Legacy Survey south_members_final_2023 contains the member galaxies for clusters in the north region of DESI Legacy Survey
DOI: 10.48597/nvhv-gqbx
title: Measurement of Sulphur_dioxide at Aliartos

description: Measurement of Sulphur_dioxide at Aliartos
DOI: 10.5281/zenodo.8164869
title: Candidate cluster-scale gravitationally lensed quasars from CluMPR and DESI Legacy Survey

description: Candidate cluster-scale strongly-lensed quasars from DESI Legacy Survey (DESI QSO targets) and CluMPR DESI Legacy Survey galaxy cluster catalog. 


Paper decribing the CluMPR galaxy cluster catalogs and candidate lensed quasar catalogs: The CluMPR Galaxy Cluster-Finding Algorithm and DESI Legacy Survey Galaxy Cluster catalogue (M. J. Yantovski-Barth et al.)


Description: 


To search for lensed quasars, we use two Einstein radii: one corresponds to wide angle lensing by the entire cluster (𝑀 = 10^15 𝑀⊙ ), and the other corresponds to lensing by the core of the cluster (𝑀 = 0.25 ∗ 10^15 𝑀⊙ ).


We use the colors in bands g-r, g-z, and r-W1 to evaluate candidate lensed quasars. If at least two quasars are within 1 magnitude of each other in all 3 colors, we rate the candidate at Grade C. If at least three quasars are within 1 magnitude of each other in all 3 colors, we rate the the candidate at Grade B. If either 4 quasars or two combinations of 3 quasars are within 1 magnitude of each other in all 3 colors, we rate the candidate as Grade A.
DOI: 10.5281/zenodo.8164870
title: Candidate cluster-scale gravitationally lensed quasars from CluMPR and DESI Legacy Survey

description: Candidate cluster-scale strongly-lensed quasars from DESI Legacy Survey (DESI QSO targets) and CluMPR DESI Legacy Survey galaxy cluster catalog. Paper decribing the CluMPR galaxy cluster catalogs and candidate lensed quasar catalogs: The CluMPR Galaxy Cluster-Finding Algorithm and DESI Legacy Survey Galaxy Cluster catalogue (M. J. Yantovski-Barth et al.) Description: To search for lensed quasars, we use two Einstein radii: one corresponds to wide angle lensing by the entire cluster (𝑀 = 10^15 𝑀⊙ ), and the other corresponds to lensing by the core of the cluster (𝑀 = 0.25 ∗ 10^15 𝑀⊙ ). We use the colors in bands g-r, g-z, and r-W1 to evaluate candidate lensed quasars. If at least two quasars are within 1 magnitude of each other in all 3 colors, we rate the candidate at Grade C. If at least three quasars are within 1 magnitude of each other in all 3 colors, we rate the the candidate at Grade B. If either 4 quasars or two combinations of 3 quasars are within 1 magnitude of each other in all 3 colors, we rate the candidate as Grade A.
DOI: 10.6084/m9.figshare.8862944
title: Additional file 2: of Integrated transcriptome, small RNA, and degradome analysis reveals the complex network regulating starch biosynthesis in maize

description: Table S1. The expression of 40 starch biosynthetic genes in the endosperm of maize inbred lines Mo17 and Ji419 at 15 and 25 DAP; Table S2. GO term and KEGG pathway enrichment of 40 starch biosynthetic genes in the endosperm of maize inbred lines Mo17 and Ji419 at 15 and 25 DAP; Table S3. Differentially expressed miRNAs in the endosperm of maize inbred lines Mo17 and Ji419 at 15 DAP; Table S4. Differentially expressed miRNAs in the endosperm of maize inbred lines Mo17 and Ji419 at 25 DAP; Table S5. Differentially expressed miRNAs and their target genes in the endosperm of maize inbred lines Mo17 and Ji419 at 15 DAP; Table S6. Differentially expressed miRNAs and their target genes in the endosperm of maize inbred lines Mo17 and Ji419 at 25 DAP; Table S7. Predicted target genes of miRNAs in the endosperm of maize inbred lines Mo17 and Ji419 at 15 and 25 DAP; Table S8. Pearsonâ s correlation coefficients between the expression of 35 target genes and eight key starch biosynthetic genes in the endosperm of maize inbred lines Mo17 and Ji419 at 15 and 25 DAP; Table S9. Primers used in this study. (XLSX 508 kb)
DOI: 10.6084/m9.figshare.8862944.v1
title: Additional file 2: of Integrated transcriptome, small RNA, and degradome analysis reveals the complex network regulating starch biosynthesis in maize

description: Table S1. The expression of 40 starch biosynthetic genes in the endosperm of maize inbred lines Mo17 and Ji419 at 15 and 25 DAP; Table S2. GO term and KEGG pathway enrichment of 40 starch biosynthetic genes in the endosperm of maize inbred lines Mo17 and Ji419 at 15 and 25 DAP; Table S3. Differentially expressed miRNAs in the endosperm of maize inbred lines Mo17 and Ji419 at 15 DAP; Table S4. Differentially expressed miRNAs in the endosperm of maize inbred lines Mo17 and Ji419 at 25 DAP; Table S5. Differentially expressed miRNAs and their target genes in the endosperm of maize inbred lines Mo17 and Ji419 at 15 DAP; Table S6. Differentially expressed miRNAs and their target genes in the endosperm of maize inbred lines Mo17 and Ji419 at 25 DAP; Table S7. Predicted target genes of miRNAs in the endosperm of maize inbred lines Mo17 and Ji419 at 15 and 25 DAP; Table S8. Pearsonâ s correlation coefficients between the expression of 35 target genes and eight key starch biosynthetic genes in the endosperm of maize inbred lines Mo17 and Ji419 at 15 and 25 DAP; Table S9. Primers used in this study. (XLSX 508 kb)
DOI: 10.48597/pd6d-v3ng
title: Measurement of Sulphur_dioxide at Aliartos

description: Measurement of Sulphur_dioxide at Aliartos
DOI: 10.48597/psk8-yt3b
title: Measurement of Inorganics in precipitation at Irafoss

description: Measurement of Inorganics in precipitation at Irafoss
DOI: 10.6084/m9.figshare.15153946
title: Additional file 1 of Characterization of genes associated with TGA7 during the floral transition

description: Additional file 1. The primers used in this study.
DOI: 10.4121/21982991
title: Data underlying the research of: human trustworthiness in 2D grid-world human-AI team interaction

description: This dataset contains both computed metrics and self-reported measures of an experiment of human-AI teamwork in a 2D grid-world. These metrics relate to ability, benevolence and integrity, as well as overal metrics of success in the task. The experiment had a between-subject design and 4 conditions (mode column): normal, ability, benevolence and integrity.Code in: https://github.com/centeio/click-collectDemo video in: https://youtu.be/89dSfAgS0LY
DOI: 10.48597/pv44-y27j
title: Measurement of Nitrogen_dioxide at Jarczew

description: Measurement of Nitrogen_dioxide at Jarczew
DOI: 10.6084/m9.figshare.8862965
title: Additional file 1: of Transcriptome analysis reveals candidate genes related to phosphorus starvation tolerance in sorghum

description: Table S1. Gene-specific primers used in gene expression analysis by qRT-PCR. (XLSX 13 kb)
DOI: 10.48597/pxrg-cxct
title: Measurement of Sulphur_dioxide at Aliartos

description: Measurement of Sulphur_dioxide at Aliartos
DOI: 10.48597/qbjy-t9hu
title: Measurement of Inorganics in precipitation at Irafoss

description: Measurement of Inorganics in precipitation at Irafoss
DOI: 10.6084/m9.figshare.8862965.v1
title: Additional file 1: of Transcriptome analysis reveals candidate genes related to phosphorus starvation tolerance in sorghum

description: Table S1. Gene-specific primers used in gene expression analysis by qRT-PCR. (XLSX 13 kb)
DOI: 10.48597/qprv-trsh
title: Measurement of Inorganics in precipitation at Rjupnahed

description: Measurement of Inorganics in precipitation at Rjupnahed
DOI: 10.48597/qskr-fbea
title: Measurement of Inorganics in air and particle phase at Jarczew

description: Measurement of Inorganics in air and particle phase at Jarczew
DOI: 10.6084/m9.figshare.25150939
title: Taxonomy and distribution of three species of <i>Barleeia</i> (Mollusca, Gastropoda, Littorinimorpha, Barleeiidae) in the intertidal zone off the coast of China, with description of a new species, <i>Barleeia qilu</i> Han, Qi & Kong, n. sp.

description: Barleeiids are common marine microgastropods worldwide. Three species of <i>Barleeia</i> (<i>Barleeia annamitica</i>, <i>Barleeia qilu</i> n. sp. and <i>Barleeia dunedini</i>) found in the intertidal zone off the coast of China are described in this study. Morphological comparisons and species delimitation analyses using the universal mitochondrial COI gene sequence showed the distinctiveness of three species. <i>Barleeia qilu</i> n. sp., differentiated by its pointed apex and sutural channelling<b>,</b> was identified as a new species following morphological observation and phylogenetic analysis. <i>Barleeia dunedini</i>, previously considered as <i>Ansola angustata</i> (Pilsbry, 1901), has emerged as a distinct species and is probably the most widely distributed barleeiid in China. <i>Barleeia annamitica</i>, which has a broader distribution than previously recorded, is reported in China for the first time. Additionally, we propose to reassign <i>Ansola angustata</i> to the genus <i>Barleeia</i> based on the phylogram. Morphological illustrations, diagnoses, descriptions, and their approximate distribution along the coast of China are provided for each species. This study improves our understanding of the species composition, distribution and diversity of <i>Barleeia</i> in the intertidal zone of China.   urn: lsid: zoobank.org:pub:7EFA6806-3A9E-40EC-A639-5AF4DB8D5CC7
DOI: 10.6084/m9.figshare.25150939.v1
title: Taxonomy and distribution of three species of <i>Barleeia</i> (Mollusca, Gastropoda, Littorinimorpha, Barleeiidae) in the intertidal zone off the coast of China, with description of a new species, <i>Barleeia qilu</i> Han, Qi & Kong, n. sp.

description: Barleeiids are common marine microgastropods worldwide. Three species of <i>Barleeia</i> (<i>Barleeia annamitica</i>, <i>Barleeia qilu</i> n. sp. and <i>Barleeia dunedini</i>) found in the intertidal zone off the coast of China are described in this study. Morphological comparisons and species delimitation analyses using the universal mitochondrial COI gene sequence showed the distinctiveness of three species. <i>Barleeia qilu</i> n. sp., differentiated by its pointed apex and sutural channelling<b>,</b> was identified as a new species following morphological observation and phylogenetic analysis. <i>Barleeia dunedini</i>, previously considered as <i>Ansola angustata</i> (Pilsbry, 1901), has emerged as a distinct species and is probably the most widely distributed barleeiid in China. <i>Barleeia annamitica</i>, which has a broader distribution than previously recorded, is reported in China for the first time. Additionally, we propose to reassign <i>Ansola angustata</i> to the genus <i>Barleeia</i> based on the phylogram. Morphological illustrations, diagnoses, descriptions, and their approximate distribution along the coast of China are provided for each species. This study improves our understanding of the species composition, distribution and diversity of <i>Barleeia</i> in the intertidal zone of China.   urn: lsid: zoobank.org:pub:7EFA6806-3A9E-40EC-A639-5AF4DB8D5CC7
DOI: 10.48597/rzbg-dqg5
title: Measurement of Sulphur_dioxide at Aliartos

description: Measurement of Sulphur_dioxide at Aliartos
DOI: 10.6084/m9.figshare.24907489
title: Annual and decadal surveys of molluscs on intertidal platform reefs in a warming marine environment in the southeastern Indian Ocean provide a baseline for monitoring for future environmental changes

description: Few data sets are available to evaluate short- and long-term perturbations and impacts of increasing anthropogenic stresses and a warming marine environment in coastal regions near cities. The Perth, Western Australia shoreline has extensive, depauperate sandy beaches interrupted by small, biodiverse intertidal reef platforms. We present transect data on mollusc diversity and density on three Perth platforms recorded from 1983 to 1987, and compare it to 2007 and 2021 to analyse assemblage modifications in response to increased anthropogenic pressures. NMDS multivariate analysis showed a consistent drift in assemblage composition in 2007 and 2021, but this is was not statistically significant from the 1980s baseline (PERMANOVA, <i>P</i> = 0.336). There was no significant long-term decline (or increase) in molluscan species richness. Most species were uncommon but eight were recorded on at least 20 of the 21 surveys. The endemic Western Australian mussel <i>Brachidontes ustulatus</i> (Lamarck, 1819) accounted for 71.8% of all individuals. Total mollusc density varied primarily with changes in <i>B. ustulatus</i>. Tropical species were a minor component of the molluscs that did not change in diversity with warming temperatures. These data provide a long-term baseline for monitoring future anthropogenic changes.
DOI: 10.6084/m9.figshare.24907489.v1
title: Annual and decadal surveys of molluscs on intertidal platform reefs in a warming marine environment in the southeastern Indian Ocean provide a baseline for monitoring for future environmental changes

description: Few data sets are available to evaluate short- and long-term perturbations and impacts of increasing anthropogenic stresses and a warming marine environment in coastal regions near cities. The Perth, Western Australia shoreline has extensive, depauperate sandy beaches interrupted by small, biodiverse intertidal reef platforms. We present transect data on mollusc diversity and density on three Perth platforms recorded from 1983 to 1987, and compare it to 2007 and 2021 to analyse assemblage modifications in response to increased anthropogenic pressures. NMDS multivariate analysis showed a consistent drift in assemblage composition in 2007 and 2021, but this is was not statistically significant from the 1980s baseline (PERMANOVA, <i>P</i> = 0.336). There was no significant long-term decline (or increase) in molluscan species richness. Most species were uncommon but eight were recorded on at least 20 of the 21 surveys. The endemic Western Australian mussel <i>Brachidontes ustulatus</i> (Lamarck, 1819) accounted for 71.8% of all individuals. Total mollusc density varied primarily with changes in <i>B. ustulatus</i>. Tropical species were a minor component of the molluscs that did not change in diversity with warming temperatures. These data provide a long-term baseline for monitoring future anthropogenic changes.
DOI: 10.48597/t5rp-kw84
title: Measurement of Inorganics in precipitation at Irafoss

description: Measurement of Inorganics in precipitation at Irafoss
DOI: 10.48597/tpac-ujy9
title: Measurement of Inorganics in precipitation at Irafoss

description: Measurement of Inorganics in precipitation at Irafoss
DOI: 10.48597/tpy8-5cnx
title: Measurement of Inorganics in air and particle phase at Jarczew

description: Measurement of Inorganics in air and particle phase at Jarczew
DOI: 10.6084/m9.figshare.15153958
title: Additional file 5 of Characterization of genes associated with TGA7 during the floral transition

description: Additional file 5. Identification of key flowering time-related DEGs.
DOI: 10.15468/dl.wdw9z5
title: Occurrence Download

description: A dataset containing 80359 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Monitoreos trianuales de fauna y flora en el Valle del Cerrejón, La Guajira"
 ]
}

 The dataset includes 80359 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022300-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.23537925
title: BFR-T Balance data DOI: 10.6084/m9.figshare.23537925

description: Dataset for a manuscript evaluating the effect of blood-flow restriction exercise on dynamic balance performance using the lower quarter Y-balance test.
DOI: 10.5281/zenodo.8002595
title: SVBD

description: SVBD
description: Remote sensing dataset; deep learning; soil water erosion assessment; object-based image classification; land use/land cover mapping.
DOI: 10.5281/zenodo.8002594
title: SVBD

description: SVBD
description: Remote sensing dataset; deep learning; soil water erosion assessment; object-based image classification; land use/land cover mapping.
DOI: 10.15468/dl.yvm9uh
title: Occurrence Download

description: A dataset containing 800 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acanthospermum hispidum",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 800 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015077-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2za6m3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acanthospermum hispidum",
 "Country is Bangladesh",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015078-250827131500795/datasets/export for details.
DOI: 10.15468/dl.vucmza
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acanthospermum hispidum",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015080-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kauqrn
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pulmonaria montana"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015079-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-5827
title: Publicity at Del Mar, CA, 1927

description: 20 photographs of publicity at Del Mar, Del Mar, CA, 1927. "Subject: Publicity at Del Mar; Agency: Logan & Steffins; Client: South Coast Land Co.; Year: 1927; Job: 77-24-68B" -- on envelope.
DOI: 10.15468/dl.533xzt
title: Occurrence Download

description: A dataset containing 6244 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Artemisia scoparia Waldst. & Kit.)"
 ]
}

 The dataset includes 6244 records from 236 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007152-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gwxjwp
title: Occurrence Download

description: A dataset containing 791 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tapirus bairdii (Gill, 1865)"
 ]
}

 The dataset includes 791 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069588-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ikow5b
title: Occurrence Download

description: A dataset containing 424 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tapirus bairdii (Gill, 1865)",
 "Country is Mexico"
 ]
}

 The dataset includes 424 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069589-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-5820
title: Publicity at Del Mar, CA, 1927

description: 20 photographs of publicity at Del Mar, Del Mar, CA, 1927. "Subject: Publicity at Del Mar; Agency: Logan & Steffins; Client: South Coast Land Co.; Year: 1927; Job: 77-24-68B" -- on envelope.
DOI: 10.15468/dl.p55pgv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "GenusKey" : [
 "is Eugenia"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007153-240506114902167/datasets/export for details.