cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.pwf5gd
title: Occurrence Download

description: A dataset containing 148 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Erythrolamprus typhlus (Linnaeus, 1758)"
 ]
}

 The dataset includes 148 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048836-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6g9pmr
title: Occurrence Download

description: A dataset containing 2412 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Indri indri (Gmelin, 1788)"
 ]
}

 The dataset includes 2412 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054120-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pkfkhy
title: Occurrence Download

description: A dataset containing 1299 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Waarneming.nl (NL) - Great Grey Shrike Count 2014-2015"
 ]
}

 The dataset includes 1299 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003093-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pqelwz
title: Occurrence Download

description: A dataset containing 12224 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepus granatensis Rosenhauer, 1856"
 ]
}

 The dataset includes 12224 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030876-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dk6bdz
title: Occurrence Download

description: A dataset containing 497 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ateles belzebuth É.Geoffroy Saint-Hilaire, 1806"
 ]
}

 The dataset includes 497 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054118-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q7gdu4
title: Occurrence Download

description: A dataset containing 221 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Monophyllus redmani redmani"
 ]
}

 The dataset includes 221 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003093-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ywccjc
title: Occurrence Download

description: A dataset containing 1901 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-55.59837 -16.28586,-54.92409 -16.28586,-54.92409 -15.64178,-55.59837 -15.64178,-55.59837 -16.28586))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1901 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060705-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kc72h4
title: Occurrence Download

description: A dataset containing 134832 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crotalus Linnaeus, 1758"
 ]
}

 The dataset includes 134832 records from 287 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044589-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tdgarc
title: Occurrence Download

description: A dataset containing 14680 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Material sample"
 ]
 },
 "Year 1901-2017",
 "HasCoordinate is true",
 "TaxonKey is Alces alces (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 14680 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004691-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6pbu6m
title: Occurrence Download

description: A dataset containing 336 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acerodon jubatus (Eschscholtz, 1831)"
 ]
}

 The dataset includes 336 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0060696-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cqn742
title: Occurrence Download

description: A dataset containing 327 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Brazil",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pittosporum undulatum Vent."
 ]
}

 The dataset includes 327 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056025-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7i5hdf
title: Occurrence Download

description: A dataset containing 16239 species occurrences available in GBIF matching the query:
{
 "or" : [
 "DatasetKey is Admiralty Bay Benthos Diversity Data Base (ABBED). Cumacea.",
 "DatasetKey is Admiralty Bay Benthos Diversity Data Base (ABBED). Polychaeta. 1979-80",
 "DatasetKey is Admiralty Bay Benthos Diversity Data Base (ABBED). Pycnogonida.",
 "DatasetKey is Admiralty Bay Benthos Diversity Data Base (ABBED). Tanaidacea.",
 "DatasetKey is Amphipoda Hyperiidea of the Southern Ocean: catalogue and occurrences",
 "DatasetKey is ANDEEP3: SeaStars (Echinodermata, Asteroidea)",
 "DatasetKey is Ant'Phipoda Database (New records)",
 "DatasetKey is Antarctic Amphipod Crustaceans: Ant'Phipoda Database (BIANZO)",
 "DatasetKey is Antarctic Amphipoda",
 "DatasetKey is Antarctic and sub-Antarctic Lophogastrida occurrences",
 "DatasetKey is Antarctic and Subantarctic Asteroid zoogeography",
 "DatasetKey is Antarctic Arrow worms",
 "DatasetKey is Antarctic Echinoids: an interactive database",
 "DatasetKey is Antarctic Euphausiacea occurence data from \"German Antarctic Marine Living Resources\" (GAMLR) Expeditions",
 "DatasetKey is Antarctic Euphausiacea occurence data from Norwegian Antarctic Research Expedition 1976-77",
 "DatasetKey is Antarctic Euphausiacea occurence data from Polish FIBEX expeditions",
 "DatasetKey is Antarctic Euphausiacea occurrence data from ITALICA 2000 Expedition",
 "DatasetKey is Antarctic Euphausiacea occurrence data from Norwegian Antarctic Research Expedition 1979",
 "DatasetKey is Antarctic fish Gobionotothen gibberifrons",
 "DatasetKey is Antarctic Foraminiferans"
 ]
}

 The dataset includes 16239 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003093-170627171947987/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.djwmqm
title: Occurrence Download

description: A dataset containing 794 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters is less than or equal to 500.0",
 "Geometry POLYGON((-24.49081 33.30761,21.49081 33.30761,21.49081 51.69239,-24.49081 51.69239,-24.49081 33.30761))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pelobates cultripes (Cuvier, 1829)",
 "Year 2012-2022"
 ]
}

 The dataset includes 794 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012210-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9hqz62
title: Occurrence Download

description: A dataset containing 31 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Apistogramma resticulosa Kullander, 1980"
 ]
}

 The dataset includes 31 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056019-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8bl1kr
title: Occurrence Download

description: A dataset containing 43878 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Norway",
 {
 "or" : [
 "TaxonKey is Ophioglossum vulgatum L.",
 "TaxonKey is Thelypteris palustris Schott",
 "TaxonKey is Rumex hydrolapathum (Scop.) Huds.",
 "TaxonKey is Limonium humile Mill.",
 "TaxonKey is Beta vulgaris subsp. maritima (L.) Arcang.",
 "TaxonKey is Kali turgidum (Dumort.) Gutermann",
 "TaxonKey is Silene nutans L.",
 "TaxonKey is Pulsatilla pratensis (L.) Mill.",
 "TaxonKey is Myosurus minimus L.",
 "TaxonKey is Corydalis pumila (Host) Rchb.",
 "TaxonKey is Saxifraga L.",
 "TaxonKey is Saxifraga tridactylites L.",
 "TaxonKey is Rubus cyclomorphus H.E.Weber",
 "TaxonKey is Rubus dissimulans Lindeb.",
 "TaxonKey is Cotoneaster laxiflorus (J.Jacq.) Lindl.",
 "TaxonKey is Ononis arvensis L.",
 "TaxonKey is Ononis spinosa subsp. procurrens (Wallr.) Briq."
 ]
 }
 ]
}

 The dataset includes 43878 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003093-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6ukk8g
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Allium kossoricum Fomin"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0108403-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h9u9ev
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "TaxonKey is one of (Helicops pastazae Shreve, 1934)"
 ]
}

 The dataset includes 78 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030007-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7eegee
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((145.6 -17.9,145.6 -17.8,145.7 -17.8,145.7 -17.9,145.6 -17.9))",
 "HasCoordinate is true",
 "TaxonKey is Poaceae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003093-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7kltlz
title: Occurrence Download

description: A dataset containing 1975 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 {
 "or" : [
 "Country is China",
 "Country is Japan"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Arachniodes simplicior (Makino) Ohwi",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1975 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033076-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8qd3ax
title: Occurrence Download

description: A dataset containing 4897 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "TaxonKey is one of (Hydrochoerus hydrochaeris (Linnaeus, 1766))"
 ]
}

 The dataset includes 4897 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030033-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.12577226.v1
title: Additional file 7 of Low-cost FDM 3D-printed modular electrospray/electrospinning setup for biomedical applications

description: Additional file 7. All the STL files of the parts compressed.
DOI: 10.6084/m9.figshare.12577220.v1
title: Additional file 6 of Low-cost FDM 3D-printed modular electrospray/electrospinning setup for biomedical applications

description: Additional file 6. CAD drawing of the end part with air channels.
DOI: 10.6084/m9.figshare.12053070
title: Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients

description: Circulating in China and 158 other countries and areas, the ongoing COVID-19 outbreak has caused devastating mortality and posed a great threat to public health. However, efforts to identify effectively supportive therapeutic drugs and treatments has been hampered by our limited understanding of host immune response for this fatal disease. To characterize the transcriptional signatures of host inflammatory response to SARS-CoV-2 (HCoV-19) infection, we carried out transcriptome sequencing of the RNAs isolated from the bronchoalveolar lavage fluid (BALF) and peripheral blood mononuclear cells (PBMC) specimens of COVID-19 patients. Our results reveal distinct host inflammatory cytokine profiles to SARS-CoV-2 infection in patients, and highlight the association between COVID-19 pathogenesis and excessive cytokine release such as CCL2/MCP-1, CXCL10/IP-10, CCL3/MIP-1A, and CCL4/MIP1B. Furthermore, SARS-CoV-2 induced activation of apoptosis and P53 signalling pathway in lymphocytes may be the cause of patients’ lymphopenia. The transcriptome dataset of COVID-19 patients would be a valuable resource for clinical guidance on anti-inflammatory medication and understanding the molecular mechansims of host response.
DOI: 10.6084/m9.figshare.12577526
title: Additional file 4 of Maternal dietary resistant starch does not improve piglet’s gut and liver metabolism when challenged with a high fat diet

description: Additional file 4 Differential Expressed (DE) Gene Ontology (GO) term enrichment. Genes were considered as DE when the difference between treatments was significant after adjusting for multiple testing using Benjamini-Hochberg (FDR &lt; 0.1). DE was investigated with regard to maternal diet (Digestible Starch (DS) vs Resistant Starch (RS) diet) and piglet treatment (Control (CON) vs High Fat (HF) diet). For all genes, the ‘log2 fold change’ and recalculated fold change is shown, as well as the ‘(adjusted) p-value’ for that fold change. Other metrics shown are ‘baseMean’, or the mean of the normalized counts for all samples, ‘lfcSE’, or the standard error estimate for the log2 fold change estimate and ‘stat’, the Wald statistic for the comparison examined.
DOI: 10.6084/m9.figshare.12053070.v3
title: Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients

description: Circulating in China and 158 other countries and areas, the ongoing COVID-19 outbreak has caused devastating mortality and posed a great threat to public health. However, efforts to identify effectively supportive therapeutic drugs and treatments has been hampered by our limited understanding of host immune response for this fatal disease. To characterize the transcriptional signatures of host inflammatory response to SARS-CoV-2 (HCoV-19) infection, we carried out transcriptome sequencing of the RNAs isolated from the bronchoalveolar lavage fluid (BALF) and peripheral blood mononuclear cells (PBMC) specimens of COVID-19 patients. Our results reveal distinct host inflammatory cytokine profiles to SARS-CoV-2 infection in patients, and highlight the association between COVID-19 pathogenesis and excessive cytokine release such as CCL2/MCP-1, CXCL10/IP-10, CCL3/MIP-1A, and CCL4/MIP1B. Furthermore, SARS-CoV-2 induced activation of apoptosis and P53 signalling pathway in lymphocytes may be the cause of patients’ lymphopenia. The transcriptome dataset of COVID-19 patients would be a valuable resource for clinical guidance on anti-inflammatory medication and understanding the molecular mechansims of host response.
DOI: 10.6084/m9.figshare.13101052
title: Additional file 2 of Clonal tracing reveals diverse patterns of response to immune checkpoint blockade

description: Additional file 2: Table S1. Barcode identity of the isolated single-cell-derived clones.
DOI: 10.6084/m9.figshare.12577349
title: Additional file 1 of Transcriptome analysis of genes related to gonad differentiation and development in Muscovy ducks

description: Additional file 1.
DOI: 10.4121/13626143
title: Dataset corresponding to publication: "Effect of axially varying sandpaper roughness on bubbly drag reduction in Taylor–Couette turbulence "

description: This dataset contains measurement data from drag comparison experiments over rough, smooth, and partly rough walls in turbulent flows. A Taylor–Couette apparatus was used for the experiments, of which the inner cylinder was made rough by attaching sandpaper belts to it. By varying the width (indicated by <i>s/d</i>) of the sandpaper belts, and also the corresponding spacing between two belts, an axially varying pattern of a rough-smooth surface was created. The drag reducing effect of air bubbles is studied for the different surface roughness configurations.<br>See readme.txt file for more information regarding the dataset.
DOI: 10.6084/m9.figshare.12577466.v1
title: Additional file 8 of Immune-related long non-coding RNA signature identified prognosis and immunotherapeutic efficiency in bladder cancer (BLCA)

description: Additional file 8: Table S3. Summary of ssGSEA scores for hallmark gene sets in TCGA-BLCA cohort.
DOI: 10.5281/zenodo.10776406
title: CROWN Test
DOI: 10.5281/zenodo.10776407
title: CROWN Test
DOI: 10.5281/zenodo.10776602
title: CROWN Test
DOI: 10.6084/m9.figshare.12577349.v1
title: Additional file 1 of Transcriptome analysis of genes related to gonad differentiation and development in Muscovy ducks

description: Additional file 1.
DOI: 10.6084/m9.figshare.12577523
title: Additional file 3 of Maternal dietary resistant starch does not improve piglet’s gut and liver metabolism when challenged with a high fat diet

description: Additional file 3: Supplementary Figure 3A and 3B. Overview of correlations of the all modules in colon (A) or liver (B). Correlations were calculated between the eigenvalue of the module and traits of interest: sow treatment (DS as 0, CON as 1), piglet treatment (CON as 0, HF as 1), piglet weight, backfat thickness, muscle thickness and meat percentage.
DOI: 10.6084/m9.figshare.12577523.v1
title: Additional file 3 of Maternal dietary resistant starch does not improve piglet’s gut and liver metabolism when challenged with a high fat diet

description: Additional file 3: Supplementary Figure 3A and 3B. Overview of correlations of the all modules in colon (A) or liver (B). Correlations were calculated between the eigenvalue of the module and traits of interest: sow treatment (DS as 0, CON as 1), piglet treatment (CON as 0, HF as 1), piglet weight, backfat thickness, muscle thickness and meat percentage.
DOI: 10.6084/m9.figshare.12577538.v1
title: Additional file 6 of Maternal dietary resistant starch does not improve piglet’s gut and liver metabolism when challenged with a high fat diet

description: Additional file 6. WGCNA Modules Gene Ontology (GO) term enrichment. GO enrichment performed on all differential expressed (DE) genes (FDR &lt; 0.1) in the significant WGCNA modules of the colon or liver datasets. The GO enrichment tool Panther (version 13.1) was used and Pathways and Slim Biological Processes were examined.
DOI: 10.6084/m9.figshare.12577616.v1
title: Additional file 2 of Reservoirs of antimicrobial resistance genes in retail raw milk

description: Additional file 2: Supplementary Data 2. Data employed in all network analyses in this work.
DOI: 10.6084/m9.figshare.12577610.v1
title: Additional file 1 of Reservoirs of antimicrobial resistance genes in retail raw milk

description: Additional file 1: Supplementary Data 1. List of ARGs observed in milk samples from California.
DOI: 10.6084/m9.figshare.12577616
title: Additional file 2 of Reservoirs of antimicrobial resistance genes in retail raw milk

description: Additional file 2: Supplementary Data 2. Data employed in all network analyses in this work.
DOI: 10.15468/4pc5e6
title: 2010-2013 Ryland et al. UK first Schizoporella japonica records

description: Schizoporella japonica Ortmann was described from Japan but was subsequently introduced on Pacific oysters to the Pacific coast of North America, where it is now well established. In this paper we record it for the first time in European waters. The initial discovery was in a marina at Holyhead, North Wales, in July 2010 but S. japonica has since been observed abundantly in the Orkney Islands (from May 2011) and, subsequently, at other localities in northern Scotland. Introduction seems most likely to have been on an ocean-going vessel. The British material is here fully described and illustrated with SEMs and colour photographs; some unusual characters are discussed. Unlike other recently introduced bryozoans, S. japonica is a cold-water species and its breeding season in Britain extends through the winter. Extensive confusion between this and other species of Schizoporella on the west coast of Canada and the USA led us to make thorough morphometric comparisons between the species concerned (Schizoporella unicornis (Johnston in Wood), Schizoporella errata (Waters) and Schizoporella pseudoerrata Soule, Soule and Chaney). Zooid size in cheilostomate bryozoans is variable and often an unreliable character for species separation but shape (and therefore ratios between variables,which are independent of size) are often valuable: S. japonica zooids have a much greater length:width ratio than the other species. Density of frontal pseudopores provides a useful discriminatory character. Schizoporella unicornis, repeatedly reported in error from the Pacific coast of North America, does not occur there; it is a European species. Full comparisons are made between S. japonica and S. unicornis for European identification and between S. japonica, S. errata and S. pseudoerrata (which are also illustrated) for North American localities.
DOI: 10.6084/m9.figshare.12577466
title: Additional file 8 of Immune-related long non-coding RNA signature identified prognosis and immunotherapeutic efficiency in bladder cancer (BLCA)

description: Additional file 8: Table S3. Summary of ssGSEA scores for hallmark gene sets in TCGA-BLCA cohort.