cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21931566.v1
title: Data for Heap et al. (JGR: Solid Earth)

description: Excel spreadsheet containing the mechanical and permeability data for "Compaction and permeability evolution of tuff from Krafla volcano (Iceland)" by Heap et al. (JGR: Solid Earth).
DOI: 10.4121/19017794
title: Data of Article "Get rid of the eco-button! Design interventions to steer sustainable use of washing machines"

description: 2x2 factorial design experiment (coercion x feedback) testing the effectivity on energy reduction in washing machines. 800 European respondent set the control panel of one of four models washing machines for three laundry baskets. The attached word-document together with the article is questionnaire data in the excel
DOI: 10.4121/19017794.v2
title: Data of Article "Get rid of the eco-button! Design interventions to steer sustainable use of washing machines"

description: 2x2 factorial design experiment (coercion x feedback) testing the effectivity on energy reduction in washing machines. 800 European respondent set the control panel of one of four models washing machines for three laundry baskets. The attached word-document together with the article is questionnaire data in the excel
DOI: 10.6084/m9.figshare.21931566
title: Data for Heap et al. (JGR: Solid Earth)

description: Excel spreadsheet containing the mechanical and permeability data for "Compaction and permeability evolution of tuff from Krafla volcano (Iceland)" by Heap et al. (JGR: Solid Earth).
DOI: 10.5281/zenodo.7541178
title: Data set for "On the interplay between lipids and asymmetric dynamics of an NBS degenerate ABC transporter"

description: Supplementary data from molecular dynamics simulations performed on different states of bMRP1 (IF apo, IF ATP- and/or LTX-bound, as well as OF ATP-bound states) and embedded in different lipid bilayer membranes (namely POPC, POPE, POPC:POPE (3:1), POPC-Chol (3:1) and POPC:POPE:Chol (2:1:1). Are included: - Initial and postMD data - MD inputs used - Raw source data used for plot (ABC structural parameters, H-bond and non-covalent analyses, lipid order parameters, and efficiencies from Allopath tool) - PCA supplementary movies (PC1)
DOI: 10.5281/zenodo.7541177
title: Data set for "On the interplay between lipids and asymmetric dynamics of an NBS degenerate ABC transporter"

description: Supplementary data from molecular dynamics simulations performed on different states of bMRP1 (IF apo, IF ATP- and/or LTX-bound, as well as OF ATP-bound states) and embedded in different lipid bilayer membranes (namely POPC, POPE, POPC:POPE (3:1), POPC-Chol (3:1) and POPC:POPE:Chol (2:1:1). Are included: - Initial and postMD data - MD inputs used - Raw source data used for plot (ABC structural parameters, H-bond and non-covalent analyses, lipid order parameters, and efficiencies from Allopath tool) - PCA supplementary movies (PC1)
DOI: 10.6084/m9.figshare.21791813
title: Supplementary File for Comparison data of transcriptomes from blastocyst seeding samples and cultured cell lines from pigs

description: Supplementary File for Comparison data of transcriptomes from blastocyst seeding samples and cultured cell lines from pigs
DOI: 10.5281/zenodo.7554723
title: clarias_gariepinus_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.7554722
title: clarias_gariepinus_spades_01.fasta.gz

description: .
DOI: 10.6084/m9.figshare.21779636
title: Annual mangrove maps from 1988 to 2022 in the Sundarbans

description: Annual mangrove maps in the Sundarbans derived from a 35-year Landsat archive and our proposed TCC-CS change detection algorithm. <br> AnnualMangroveMaps.zip stores mangrove maps in the Sundarbans for each year from 1988 to 2022 with the GeoTIFF format. AnnualMGF.nc stores the annual mangrove maps as an image stack with the NetCDF format. MangroveChanges.zip stores the timing and agents of loss and gain areas. <br> Please cite this work as "Zhang, Z.; Ahmed, M.R.; Zhang, Q.; Li, Y.; Li, Y. Monitoring of 35-Year MangroveWetland Change Dynamics and Agents in the Sundarbans Using Temporal Consistency Checking. Remote Sens. 2023, 15, 625. " for using this data. <br> Please contact Mr. Zhen Zhang (zh.zhang19951120@gmail.com) if you have any questions.
DOI: 10.6084/m9.figshare.21638030.v1
title: kinematic data of left limbs

description: this dataset included the kinematic data and vertical ground reaction force at 12, 14, and 16km/h, during treadmill running.
DOI: 10.6084/m9.figshare.20522105.v1
title: Endoscopic ultrasound‑guided biliary drainage in patients with surgically altered anatomy: a systematic review and Meta‑analysis

description: Endoscopic retrograde cholangiopancreatography is technically challenging to perform in patients with surgically altered anatomy (SAA). For these patients, endoscopic ultrasound-guided biliary drainage (EUS-BD) is one of the good indications. The aim of our systematic review and meta-analysis was to identify and evaluate evidence of the efficacy and safety of EUS-BD in patients with SAA. A systematic review of the PubMed was conducted through to December 2021 to identify studies performing EUS-BD in patients with SAA. The primary outcome was the pooled technical success proportion in patients with SAA. The pooled clinical success and adverse event proportions in patients with SAA were also analyzed. The search identified 1195 possible records, with 18 studies meeting our criteria for analysis, reporting data for 409 patients with SAA who underwent EUS-BD. The pooled technical success, clinical success and adverse event proportions in patients with SAA were 97.8% (95% confidence interval [CI], 95.8–99.7%), 94.9% (95% CI, 91.8–98.1%), and 12.8% (95% CI, 7.4–18.1%), respectively. EUS-BD is effective for patients with SAA. However, adverse events should be considered when performing EUS-BD in these patients.
DOI: 10.6084/m9.figshare.20522105
title: Endoscopic ultrasound‑guided biliary drainage in patients with surgically altered anatomy: a systematic review and Meta‑analysis

description: Endoscopic retrograde cholangiopancreatography is technically challenging to perform in patients with surgically altered anatomy (SAA). For these patients, endoscopic ultrasound-guided biliary drainage (EUS-BD) is one of the good indications. The aim of our systematic review and meta-analysis was to identify and evaluate evidence of the efficacy and safety of EUS-BD in patients with SAA. A systematic review of the PubMed was conducted through to December 2021 to identify studies performing EUS-BD in patients with SAA. The primary outcome was the pooled technical success proportion in patients with SAA. The pooled clinical success and adverse event proportions in patients with SAA were also analyzed. The search identified 1195 possible records, with 18 studies meeting our criteria for analysis, reporting data for 409 patients with SAA who underwent EUS-BD. The pooled technical success, clinical success and adverse event proportions in patients with SAA were 97.8% (95% confidence interval [CI], 95.8–99.7%), 94.9% (95% CI, 91.8–98.1%), and 12.8% (95% CI, 7.4–18.1%), respectively. EUS-BD is effective for patients with SAA. However, adverse events should be considered when performing EUS-BD in these patients.
DOI: 10.5281/zenodo.7554729
title: Theoretical analysis of correlations between two quantum fields exciting a three-level system using the cluster-expansion approach

description: Dataset of the publication "Theoretical analysis of correlations between two quantum fields exciting a three-level system using the cluster-expansion approach" H. Rose, O. V. Tikhonova, T. Meier, and P. R. Sharapova, Proc. SPIE 11999, Ultrafast Phenomena and Nanophotonics XXVI, 1199905 (2022). ( https://doi.org/10.1117/12.2608528 ). The zip file includes the data on which the plots shown in figures 1, 2, and 3 are based.
description: Financial support due to the joint grant by the Deutsche Forschungsgemeinschaft (DFG) and the Russian Science Foundation (RSF) (projects SH 1228/2-1, ME 1916/7-1, No. 19-42-04105) is gratefully acknowledged. We thank the PC^2 (Paderborn Center for Parallel Computing) for providing us a computing time grant.
DOI: 10.5281/zenodo.7554728
title: Theoretical analysis of correlations between two quantum fields exciting a three-level system using the cluster-expansion approach

description: Dataset of the publication "Theoretical analysis of correlations between two quantum fields exciting a three-level system using the cluster-expansion approach" H. Rose, O. V. Tikhonova, T. Meier, and P. R. Sharapova, Proc. SPIE 11999, Ultrafast Phenomena and Nanophotonics XXVI, 1199905 (2022). ( https://doi.org/10.1117/12.2608528 ). The zip file includes the data on which the plots shown in figures 1, 2, and 3 are based.
description: Financial support due to the joint grant by the Deutsche Forschungsgemeinschaft (DFG) and the Russian Science Foundation (RSF) (projects SH 1228/2-1, ME 1916/7-1, No. 19-42-04105) is gratefully acknowledged. We thank the PC^2 (Paderborn Center for Parallel Computing) for providing us a computing time grant.
DOI: 10.5281/zenodo.6886497
title: Dynamic full-field imaging of rupture radiation: Material contrast governs source mechanism

description: Datasets related to the research article 'Dynamic full-field imaging of rupture radiation: Material contrast governs source mechanism'. <br> A readme with the necessary Matlab code to load the data is included.<br> Tested on Matlab2020b For the analytic rupture radiation simulation code please check the linked github repository.
DOI: 10.5281/zenodo.6886498
title: Dynamic full-field imaging of rupture radiation: Material contrast governs source mechanism

description: Datasets related to the research article 'Dynamic full-field imaging of rupture radiation: Material contrast governs source mechanism'. <br> A readme with the necessary Matlab code to load the data is included.<br> Tested on Matlab2020b For the analytic rupture radiation simulation code please check the linked github repository.
DOI: 10.6084/m9.figshare.21638030
title: kinematic and vGRF data of the left lower extremity

description: This dataset included the kinematic data, including joint ankle, joint angular velocity, and joint angular acceleration of the hip, knee, and ankle, as well as segment Centroid velocity of the thigh, leg, and foot. And there are corresponding vertical ground reaction forces at 12, 14, and 16km/h during treadmill running.
DOI: 10.6084/m9.figshare.21638030.v2
title: kinematic and vGRF data of the left lower extremity

description: this dataset included the kinematic data, including joint ankle, joint angular velocity, and joint angular acceleration of the hip, knee, and ankle, as well as segment Centroid velocity of the thigh, leg, and foot. And there are corresponding vertical ground reaction forces at 12, 14, and 16km/h during treadmill running.
DOI: 10.6084/m9.figshare.21637985.v2
title: kinematic and vGRF dataset of the right lower extremity

description: This dataset included the kinematic data, including joint ankle, joint angular velocity, and joint angular acceleration of the hip, knee, and ankle, as well as segment Centroid velocity of the thigh, leg, and foot. And there are corresponding vertical ground reaction forces at 12, 14, and 16km/h during treadmill running.
DOI: 10.6084/m9.figshare.21637985
title: kinematic and vGRF dataset of the right lower extremity

description: This dataset included the kinematic data, including joint ankle, joint angular velocity, and joint angular acceleration of the hip, knee, and ankle, as well as segment Centroid velocity of the thigh, leg, and foot. And there are corresponding vertical ground reaction forces at 12, 14, and 16km/h during treadmill running.
DOI: 10.6084/m9.figshare.21637985.v1
title: kinematic dataset of the right limbs

description: This data included kinematic data and vertical ground reaction forces of the 9 rearfoot strikers at 12, 14, and 16km/h, during treadmill running.
DOI: 10.24376/rd.sgul.21878271
title: Read Code listings for Neuromuscular Disease

description: This Excel spreadsheet summarises the Read codes and SNOMED CT concept IDs that were used in the MDUK funded project to initially classify patients with neuromuscular disease from the Clincal Practice Research Datalink (CPRD).
DOI: 10.24376/rd.sgul.21878271.v1
title: Read Code listings for Neuromuscular Disease

description: This Excel spreadsheet summarises the Read codes and SNOMED CT concept IDs that were used in the MDUK funded project to initially classify patients with neuromuscular disease from the Clincal Practice Research Datalink (CPRD).
DOI: 10.24376/rd.sgul.21565557
title: Code Lists for Diabetes and Infections Study

description: Excel workbook containing code listings for Diabetes and Infection study. <br> It consists of the following datasheets Read and SNOMED CT codes for a diagnosis of pre-diabetes Read and SNOMED CT Codes for a test result indicative of pre-diabetes Read and SNOMED CT codes for a diagnosis of type 2 diabetes Read and SNOMED CT codes for a diagnosis of type 1 diabetes Read and SNOMED CT codes for a non-specific diagnosis of diabetes Read and SNOMED CT codes for primary care infections ICD-10 Codes for hospital infections
DOI: 10.5281/zenodo.7554755
title: Dietary Phytoimmunostimulant Enhanced Hematological Status and Survival Rate of Common Carp (Cyprinus carpio L.)

description: This study determined the effectiveness of mango leaves (<em>Mangifera indica</em>), guava leaves (<em>Psidium guajava</em>), and noni leaves (<em>Morinda citrifolia</em>), in increasing the immune parameters of common carp (<em>Cyprinus carpio </em>L.).<strong> </strong>This research was conducted using a one-factor completely randomized design, consisting of experimental controls (commercial feed without phytoimmunostimulants = T0), and commercial feed which was supplemented with mango leaves (T1), guava leaves (T2), and noni leaves (T3). These were used in 3 replicate experiment in common carp that had been reared in floating net cages in the Koto Panjang PLTA Reservoir. Fish in groups of 100 were fed at 5% of body weight per day for 60 days with feed supplemented with 1.5 g of plant material/100g of diet. The parameters observed were erythrocyte and leukocyte profile and survival rate<strong>. </strong>The results showed that the addition of plant leaves to the feed significantly increased the profile of erythrocytes of common carp (P&lt;0.05) with the best result resulting from supplementation with guava leaves. Here, the hematological profiles were erythrocytes (1.82-1.97 x106 cells/mm<sup>3</sup>), hemoglobin (8.53-9.2 g/dL), hematocrit (35.67-39.67%,) total leukocytes )3.21-3.87 x104 cells/mm<sup>3</sup>), phagocytic index (21.33-27.00%), lymphocytes (83.33-84.33 %), monocytes (8.00-9.33%), neutrophils (7.33-7.67%), blood glucose (1.67-104 mg/dL) and survival rate (95.67%).
DOI: 10.5281/zenodo.7554754
title: Dietary Phytoimmunostimulant Enhanced Hematological Status and Survival Rate of Common Carp (Cyprinus carpio L.)

description: This study determined the effectiveness of mango leaves (<em>Mangifera indica</em>), guava leaves (<em>Psidium guajava</em>), and noni leaves (<em>Morinda citrifolia</em>), in increasing the immune parameters of common carp (<em>Cyprinus carpio </em>L.).<strong> </strong>This research was conducted using a one-factor completely randomized design, consisting of experimental controls (commercial feed without phytoimmunostimulants = T0), and commercial feed which was supplemented with mango leaves (T1), guava leaves (T2), and noni leaves (T3). These were used in 3 replicate experiment in common carp that had been reared in floating net cages in the Koto Panjang PLTA Reservoir. Fish in groups of 100 were fed at 5% of body weight per day for 60 days with feed supplemented with 1.5 g of plant material/100g of diet. The parameters observed were erythrocyte and leukocyte profile and survival rate<strong>. </strong>The results showed that the addition of plant leaves to the feed significantly increased the profile of erythrocytes of common carp (P&lt;0.05) with the best result resulting from supplementation with guava leaves. Here, the hematological profiles were erythrocytes (1.82-1.97 x106 cells/mm<sup>3</sup>), hemoglobin (8.53-9.2 g/dL), hematocrit (35.67-39.67%,) total leukocytes )3.21-3.87 x104 cells/mm<sup>3</sup>), phagocytic index (21.33-27.00%), lymphocytes (83.33-84.33 %), monocytes (8.00-9.33%), neutrophils (7.33-7.67%), blood glucose (1.67-104 mg/dL) and survival rate (95.67%).
DOI: 10.13020/44fx-h156
title: Tnseq screen of Mycobacterium tuberculosis Himar1 transposon library grown in MtbYM rich medium and treated with antitubercular drugs.

description: Transposon-sequencing (Tn-seq) is a powerful genetic tool that can identify changes in transposon (Tn) mutant frequency during a given test condition such as drug treatment during nutrient starvation. We created an arrayed library of Tn mutants in Mycobacterium tuberculosis Erdman, screened a subset of the library (~1,000 mutants) by Tn-seq, and identified 100+ Tn mutants with altered tolerance to antibiotics in starvation conditions. We individually retested three Tn mutants to confirm their Tn-seq phenotypes, rv0457c::Tn, ppgK::Tn and clpS::Tn, and all three mutants showed reproducible increased susceptibility to drug treatment during starvation. However, the phenotypes for two of Tn mutants, ppgK::Tn and clpS::Tn, were not complemented by the Tn-disrupted gene. Whole-genome sequencing revealed that both Tn mutants had single nucleotide polymorphisms that prevented PDIM production, which was responsible for the observed drug tolerance phenotypes. This repository contains all the Illumina sequencing data for the M. tuberculosis antibiotic tolerance Tn-seq experiments and whole-genome sequencing data for our lab WT Erdman strain and three Tn mutants identified in the Tn-seq screen that were individually retested.
DOI: 10.13020/wt3q-0405
title: Mycobacterium tuberculosis Erdman ATCC 35801 arrayed Himar1 transposon library isolated using MtbYM rich medium.

description: We created a Himar1 transposon library in Mycobacterium tuberculosis Erdman ATCC 35801 strain containing ~8000 mutants arrayed in 80 tube racks in a 96-well format. The transposon library was isolated on MtbYM rich medium that allowed recovery of auxotrophic mutants that would not be viable on standard Middlebrook M. tuberculosis culture medium. Using orthogonal pooling and transposon sequencing (Tn-seq), we mapped the location of Tn mutants in the library. The library was split into two groups of 40 racks. For each set of 40 racks, pools were created of all mutants in each row (rows A-H), column (columns 1-12) and rack (racks 1-40 or 41-80) to generate 60 Tn-seq samples for Illumina sequencing. Two different mapping methods, the heuristic Straight Three strategy and the probabilistic Knockout Sudoku algorithm, were used to map the arrayed library with good agreement between both mapping methods. This repository contains Illumina sequencing data for all rack, column, and row pools used to map the entire 80 rack arrayed library.
description: Illumina sequencing files for mapping the arrayed Mycobacterium tuberculosis transposon library created using MtbYM rich medium.
DOI: 10.6084/m9.figshare.21931731.v1
title: survey supplementry information.docx

description: Survey supplementry data
DOI: 10.5281/zenodo.7554825
title: parauchenoglanis_ngamensis_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.7554824
title: parauchenoglanis_ngamensis_spades_01.fasta.gz

description: .
DOI: 10.5517/ccdc.csd.cc29fz5x
title: CCDC 2128589: Experimental Crystal Structure Determination

description: Related Article: Christoph Helling, James C. Farmer, Christoph Wölper, Robert Kretschmer, Stephan Schulz|2022|Organometallics|42|72|doi:10.1021/acs.organomet.2c00521
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29fz6y
title: CCDC 2128590: Experimental Crystal Structure Determination

description: Related Article: Christoph Helling, James C. Farmer, Christoph Wölper, Robert Kretschmer, Stephan Schulz|2022|Organometallics|42|72|doi:10.1021/acs.organomet.2c00521
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29fz7z
title: CCDC 2128591: Experimental Crystal Structure Determination

description: Related Article: Christoph Helling, James C. Farmer, Christoph Wölper, Robert Kretschmer, Stephan Schulz|2022|Organometallics|42|72|doi:10.1021/acs.organomet.2c00521
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29fz80
title: CCDC 2128592: Experimental Crystal Structure Determination

description: Related Article: Christoph Helling, James C. Farmer, Christoph Wölper, Robert Kretschmer, Stephan Schulz|2022|Organometallics|42|72|doi:10.1021/acs.organomet.2c00521
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29fz91
title: CCDC 2128593: Experimental Crystal Structure Determination

description: Related Article: Christoph Helling, James C. Farmer, Christoph Wölper, Robert Kretschmer, Stephan Schulz|2022|Organometallics|42|72|doi:10.1021/acs.organomet.2c00521
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bhyvn
title: CCDC 2160292: Experimental Crystal Structure Determination

description: Related Article: Jong-Un Park, Liang-Zhu Huang, Ho-Jun Cho, Boyoung Y. Park, Ju Hyun Kim|2022|J.Org.Chem.|88|585|doi:10.1021/acs.joc.2c02602
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7554794
title: Constraining Bedrock Groundwater Residence Times in a Mountain System with Environmental Tracer Observations and Bayesian Uncertainty Quantification: Modeling and Data Package

description: Here we present field observations of dissolved noble gases (He, Ne, Ar, Kr, and Xe), Chloroflourcarbons (CFCs), Sulfurhexaflouride (SF6), and tritium (3H) sampled from the PLM1, PLM6, and PLM7 wells in the East River Colorado (USA) sampled in May, 2021. This observation dataset, along with the presented python modeling scripts to interpret the data, can aide in quantifying groundwater residence times and recharge conditions. The README files describes the directories and scripts.
DOI: 10.34740/kaggle/dsv/4877522
title: Mahanagar Yatayat Dataset