cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14892642.v1
title: Language dimensions of Epidemic Psychology

description: Each column is a different type of NLP measurement applied to the data. Each row is a day. Cells represent the returns of the values compared to the value y0 of the initial day, February 1st 2020 (i.e., (yt/y0)-1).<br>Measurements belong to different categories, identified by prefixes:- liwc_ : LIWC measures (http://liwc.wpengine.com/)- emolex_: Emolex measures (https://saifmohammad.com/WebPages/NRC-Emotion-Lexicon.htm)- morality_: lexicon of moral foundations (Graham et al. "Liberals and conservatives rely on different sets of moral foundations", Journal of personality and social psychology, 2009)- prosocial_: prosocial behaviour lexicon (Frimer et al. "Moral actor, selfish agent" Journal of personality and social psychology, 2014)- socialdims_: social dimensions of conversations extracted through deep learning (Choi et al, "Ten Social Dimensions of Conversations and Relationships" The Web Conference 2020)<br>healthconditions_: mentions of mental and physical medical conditions extracted through deep learning (Šćepanović et al. "Extracting Medical Entities from Social Media", ACM Conference on Health, Inference, and Learning)phase_: aggregated measures that identify different phases of the evolution of epidemic psychology facets over time<br>
DOI: 10.5281/zenodo.5042103
title: pH-responsive aminolipid nanocarriers for antimicrobial peptide delivery

description: Raw data for the paper entitled, "pH-responsive aminolipid nanocarriers for antimicrobial peptide delivery" published in the Journal of Colloid and Interface Science on 11 June 2021. Abstract: pH-responsive aminolipid self-assemblies are promising platforms for the targeted delivery of antimicrobial peptides (AMPs), with the potential to improve their therapeutic efficiency and physicochemical stability. pH-sensitive nanocarriers based on dispersed self-assemblies of 1,2-dioleoyl-3-dimethylammonium-propane (DODAP) with the human cathelicidin LL-37 in excess water were characterized at different pH values using small-angle X-ray scattering, cryogenic transmission electron microscopy, and dynamic light scattering. Fluorescence and electrophoretic mobility measurements were used to probe the encapsulation efficiency of LL-37 and the nanocarriers’ surface potential. Upon decreasing pH in the DODAP/water systems, normal oil-in-water emulsions at pH ≥ 5.0 transitioned to emulsions encapsulating inverse hexagonal and cubic structures at pH between 4.5 and 4.0, and mostly positively-charged vesicles at pH &lt; 4.0. These colloidal transformations are driven by the protonation of DODAP upon pH decrease. The larger lipid-water interfacial area provided by the DODAP self-assemblies at pH ≤ 4.5 allowed for an adequate encapsulation efficiency of LL-37, favouring the formation of vesicles in a concentration-dependent manner. Contrary, LL-37 was found to dissociate from the emulsion droplets at pH 6.0. The knowledge on the pH-triggered self-assembly of LL-37 and DODAP, combined with the results on peptide release from the structures contribute to the fundamental understanding of lipid/peptide self-assembly. The results can guide the rational design of future pH-responsive AMP delivery systems.
DOI: 10.5281/zenodo.5042102
title: pH-responsive aminolipid nanocarriers for antimicrobial peptide delivery

description: Raw data for the paper entitled, "pH-responsive aminolipid nanocarriers for antimicrobial peptide delivery" published in the Journal of Colloid and Interface Science on 11 June 2021. Abstract: pH-responsive aminolipid self-assemblies are promising platforms for the targeted delivery of antimicrobial peptides (AMPs), with the potential to improve their therapeutic efficiency and physicochemical stability. pH-sensitive nanocarriers based on dispersed self-assemblies of 1,2-dioleoyl-3-dimethylammonium-propane (DODAP) with the human cathelicidin LL-37 in excess water were characterized at different pH values using small-angle X-ray scattering, cryogenic transmission electron microscopy, and dynamic light scattering. Fluorescence and electrophoretic mobility measurements were used to probe the encapsulation efficiency of LL-37 and the nanocarriers’ surface potential. Upon decreasing pH in the DODAP/water systems, normal oil-in-water emulsions at pH ≥ 5.0 transitioned to emulsions encapsulating inverse hexagonal and cubic structures at pH between 4.5 and 4.0, and mostly positively-charged vesicles at pH &lt; 4.0. These colloidal transformations are driven by the protonation of DODAP upon pH decrease. The larger lipid-water interfacial area provided by the DODAP self-assemblies at pH ≤ 4.5 allowed for an adequate encapsulation efficiency of LL-37, favouring the formation of vesicles in a concentration-dependent manner. Contrary, LL-37 was found to dissociate from the emulsion droplets at pH 6.0. The knowledge on the pH-triggered self-assembly of LL-37 and DODAP, combined with the results on peptide release from the structures contribute to the fundamental understanding of lipid/peptide self-assembly. The results can guide the rational design of future pH-responsive AMP delivery systems.
DOI: 10.5281/zenodo.5055224
title: Dataset for Variation in number agreement in Finnish dialects

description: This material contains the dataset and the scripts from the gitlab repository of the following article. Please cite the article when using the data. Sinnemäki, Kaius & Viljami Haakana 2021. Variationistinen korpustutkimus predikaatin differentiaalisesta lukukongruenssista ja substantiiviluokasta suomen murteissa. In Leena Maria Heikkola, Geda Paulsen, Katarzyna Wojciechowicz & Jutta Rosenberg (eds.), <em>Språkets funktion: Juhlakirja Urpo Nikanteen 60-vuotispäivän kunniaksi - Festskrift till Urpo Nikanne på 60-årsdagen - Festschrift for Urpo Nikanne in honor of his 60th birthday</em>, 83–112. Åbo: Åbo Akademi Förlag.
DOI: 10.5281/zenodo.5055223
title: Dataset for Variation in number agreement in Finnish dialects

description: This material contains the dataset and the scripts from the gitlab repository of the following article. Please cite the article when using the data. Sinnemäki, Kaius & Viljami Haakana 2021. Variationistinen korpustutkimus predikaatin differentiaalisesta lukukongruenssista ja substantiiviluokasta suomen murteissa. In Leena Maria Heikkola, Geda Paulsen, Katarzyna Wojciechowicz & Jutta Rosenberg (eds.), <em>Språkets funktion: Juhlakirja Urpo Nikanteen 60-vuotispäivän kunniaksi - Festskrift till Urpo Nikanne på 60-årsdagen - Festschrift for Urpo Nikanne in honor of his 60th birthday</em>, 83–112. Åbo: Åbo Akademi Förlag.
DOI: 10.5281/zenodo.5036156
title: Data repository accompanying "Rapid microwave-only characterization and readout of quantum dots using multiplexed gigahertz-frequency resonators"

description: Data repository including raw data and analysis scripts used for generating the figures appearing in the paper 'Rapid microwave-only characterization and readout of quantum dots using multiplexed gigahertz-frequency resonators'
DOI: 10.5281/zenodo.5036155
title: Data repository accompanying "Rapid microwave-only characterization and readout of quantum dots using multiplexed gigahertz-frequency resonators"

description: Data repository including raw data and analysis scripts used for generating the figures appearing in the paper 'Rapid microwave-only characterization and readout of quantum dots using multiplexed gigahertz-frequency resonators'
DOI: 10.6073/pasta/29f71a0459ab5307a585e45e48b36374
title: Eastern Massachusetts Flowering Phenology 1852-2013

description: Climate change has resulted in major changes in the phenology of some species but not others. Long-term field observational records provide the best assessment of these changes, but geographic and taxonomic biases limit their utility. Plant specimens in herbaria have been hypothesized to provide a wealth of additional data for studying phenological responses to climatic change. However, no study to our knowledge has comprehensively addressed whether herbarium data are accurate measures of phenological response, and thus applicable to addressing such questions. We compared flowering phenology determined from field observations (years 1852-1858; 1875; 1878-1908; 2003-2006; 2011-2013) and herbarium records (1852-2013) of 20 species from New England, USA. Earliest flowering date estimated from herbarium records faithfully reflected field observations of first flowering date and substantially increased the sampling range across climatic conditions. Additionally, although most species demonstrated a response to inter-annual temperature variation, long-term temporal changes in phenological response were not detectable. Our findings support the use of herbarium records for understanding plant phenological responses to changes in temperature, and also importantly establish a new use of herbarium collections: inferring primary phenological cueing mechanisms of individual species (e.g., temperature, winter chilling, photoperiod). These latter data are lacking from most investigations of phenological change, but are vital for understanding differential responses of individual species to ongoing climate change.
DOI: 10.25345/c5j24p
title: MassIVE MSV000087735 - DOM Interlab-LC-MS 2021_Lab_04
title: Interlab study of marine dissolved organic matter and algal extracts 2021. Lab 04
DOI: 10.6073/pasta/dd7f20617cb61615859c3acb1a824117
title: Foundation Species Revisited: Citation Analysis of Ellison et al. 2005

description: Ecologists and environmental scientists often prioritize research efforts with conservation importance. Dominant, widespread, or locally abundant species at low risk of extinction receive relatively little attention unless they are invasive. Native foundation species create habitats and environmental conditions that support many associated species and modulate local-scale ecosystem processes, but the generally high local or regional abundance of foundation species may lead to less research about them. We used citation analysis (2005-2014) to examine research following from a suggestion to identify and study foundation species while they were still common and not threatened. We explored the use and expanding definition of the foundation species concept, as well as the trajectory and ecological focus of research on foundation species throughout the world in 378 papers published in this nine-year span. Contemporary authors who cite key papers defining a foundation species pay little attention to its actual definition and species studied in this context rarely were identified as foundation species. Although functions and roles of foundation species, such as creating unique microclimates or supporting dependent species, are being studied, less research is focused on identifying them before they are threatened or lost from the ecosystem that they otherwise define. Invasive species were identified as the most common threat to foundation species. Our citation analysis and synthesis provides a new conceptual framework linking identification of and research about foundation species with their functional roles and our ability to manage emerging threats to them.
DOI: 10.15468/23k7g9
title: First record of the genus Australonura Cassagnau 1980 (Collembola: Neanuridae) in the New World, with description of a new species from Paraguay

description: This dataset contains the digitized treatments in Plazi based on the original journal article Palacios-Vargas, José G., Deharveng, Louis (2014): First record of the genus Australonura Cassagnau 1980 (Collembola: Neanuridae) in the New World, with description of a new species from Paraguay. Zootaxa 3779 (1): 33-47, DOI: http://dx.doi.org/10.11646/zootaxa.3779.1.6
DOI: 10.5286/isis.e.rb2000212-2
title: Reactions of 1-octene over H-ZSM-5: a model system for fluidised catalytic cracking

description: Fluidised catalytic cracking reactions using H-ZSM-5 zeolite are an important source of high-value hydrocarbons, being able to convert gasoline-range hydrocarbons to light olefins such as ethene and propene. As part of an iCASE studentship funded by Johnson Matthey plc, we have studied the effect of temperature and de-alumination on the cracking of a model compound by H-ZSM-5 using microreactor studies. These show striking differences in the nature of the products and the rate of deactivation of the catalyst as the conditions are varied. This prompted an INS study (RB2010486) using MAPS. Unfortunately the resolution of MAPS in the 0-2000 cm-1 region is insufficient to allow definitive assignments of the species present. TOSCA excels in this region and we request time to measure the same samples to enable better understanding of the chemistry in this commercially important reaction.
DOI: 10.5281/zenodo.5055666
title: FASTQ files for 4DH dataset

description: FASTQ files for the project
DOI: 10.6073/pasta/af4bcd298722586519446f4147e67b63
title: Stem maps of eight 1 ha forest plots distributed around Ann Arbor, MI and around the University of Michigan Biological Station (UMBS)

description: In this project we established a network of forest inventory plots to gather the data needed to forecast future forest performance under global change. Data collected from forest inventory plots, i.e., size and location of individual trees from all ages and species, have been shown to be particularly useful to link tree species demographic rates (survival, growth, age at maturity, fecundity) with community characteristics (assemblages and species turnovers), and are also widely used to estimate biomass removal (logging) and biomass production (carbon sequestration).
DOI: 10.15468/cpujx6
title: ffle Neotropical goblin spiders of the new genus Reductoonops (Araneae, Oonopidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Platnick, Norman I., Berniker, Lily (2014): ffle Neotropical goblin spiders of the new genus Reductoonops (Araneae, Oonopidae). American Museum Novitates 2014 (3811): 1-75, DOI: 10.1206/3811.1, URL: http://www.bioone.org/doi/abs/10.1206/3811.1
DOI: 10.17037/data.00002321
title: Data supporting "A Snapshot of the Practicality of, and Barriers to, Implementation of COVID-19 Interventions: Public Health and Healthcare Workers' Perceptions"

description: Data collected as part of a cross-sectional study of Public Health Workers (PHWs) and Healthcare Workers (HCWs) perceptions of the implementation, practicality of, and barriers to implementation of COVID-19 non-pharmaceutical interventions (NPIs) and pharmaceutical interventions (PIs). It consists of two tabular datasets, one that contain survey responses collected from Public Health Workers, and a second that contains survey responses of Healthcare workers. Variables include data on socio-demographic characteristics and key COVID-19 NPIs and PIs. Each row represents one participant.
DOI: 10.6084/m9.figshare.14893107
title: Test file

description: Test file
DOI: 10.6084/m9.figshare.14893107.v1
title: Test file

description: Test file
DOI: 10.15468/z6ztxw
title: Morphology of the males of seven species of Ortheziidae (Hemiptera: Coccoidea)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Vea, Isabelle M. (2014): Morphology of the males of seven species of Ortheziidae (Hemiptera: Coccoidea). American Museum Novitates 2014 (3812): 1-36, DOI: 10.1206/3812.1, URL: http://www.bioone.org/doi/abs/10.1206/3812.1
DOI: 10.5517/ccdc.csd.cc25k5xv
title: CCDC 2012517: Experimental Crystal Structure Determination

description: Related Article: Wande Zhang, Shiqiang Wei, Wenyao Wang, Jingping Qu, Baomin Wang|2021|Chem.Commun.|57|6550|doi:10.1039/D1CC01123E
DOI: 10.5519/qd.lyku2dgn
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (4838144 records)
DOI: 10.15468/3jk53d
title: The genus Triozocera Pierce, 1909 (Insecta: Strepsiptera: Corioxenidae) in South America

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kogan, Marcos, Cook, Jerry L. (2014): The genus Triozocera Pierce, 1909 (Insecta: Strepsiptera: Corioxenidae) in South America. Zootaxa 3779 (1): 48-60, DOI: http://dx.doi.org/10.11646/zootaxa.3779.1.7
DOI: 10.6084/m9.figshare.9825071
title: Association statistics and effects of 203 genome-wide significant SNPs

description: For each SNP, the mat file contains the RSID, chromosome and hg19 position, canonical correlation values, CCA coefficients, meta-analysis p-values, degrees of freedom, the p-value from the CCA step, and the p-value from the regression of slopes. Values from the US-driven meta-analysis are in the first column and values from the UK-driven meta-analysis are in the second column. <br><br>For each SNP, the pdf file contains: (A) -log<sub>10</sub>(p-value) of the meta-analysis p-values per facial segment in META<sub>US</sub> and META<sub>UK</sub>. Black-encircled facial segments have reached a genome-wide p-value (p &lt;= 5 x 10<sup>-8</sup>). (B) The normal displacement (displacement in the direction locally normal to the facial surface) in each quasi-landmark of the facial segment reaching the lowest p-value in META<sub>US</sub> and META<sub>UK </sub>going from the minor to the major allele SNP variant. Blue: inward depression; Red: outward protrusion. (C) LocusZoom plots in META<sub>UK</sub> (top) and META<sub>US</sub> (bottom). Points are color-coded based on linkage disequilibrium (r<sup>2</sup>) in the 1000G Phase 3 EUR super-population. Asterisks represent genotyped SNPs, circles represent imputed SNPs.
DOI: 10.6084/m9.figshare.9825071.v3
title: Association statistics and effects of 203 genome-wide significant SNPs

description: For each SNP, the mat file contains the RSID, chromosome and hg19 position, canonical correlation values, CCA coefficients, meta-analysis p-values, degrees of freedom, the p-value from the CCA step, and the p-value from the regression of slopes. Values from the US-driven meta-analysis are in the first column and values from the UK-driven meta-analysis are in the second column. <br><br>For each SNP, the pdf file contains: (A) -log<sub>10</sub>(p-value) of the meta-analysis p-values per facial segment in META<sub>US</sub> and META<sub>UK</sub>. Black-encircled facial segments have reached a genome-wide p-value (p &lt;= 5 x 10<sup>-8</sup>). (B) The normal displacement (displacement in the direction locally normal to the facial surface) in each quasi-landmark of the facial segment reaching the lowest p-value in META<sub>US</sub> and META<sub>UK </sub>going from the minor to the major allele SNP variant. Blue: inward depression; Red: outward protrusion. (C) LocusZoom plots in META<sub>US</sub> (top) and META<sub>UK</sub> (bottom). Points are color-coded based on linkage disequilibrium (r<sup>2</sup>) in the 1000G Phase 3 EUR super-population. Asterisks represent genotyped SNPs, circles represent imputed SNPs.
DOI: 10.6084/m9.figshare.14893116
title: Modeling individual development plans, mentoring support, and career preparedness relationships among Ph.D. trainees in the life sciences

description: This study proposed two conceptual models to examine the interrelationships among the use of IDPs, mentoring support, and career preparedness with a diverse sample of doctoral students and postdoctoral researchers in the life sciences. The data leveraged for this study was collected over a three-month period, March 2016 to June 2016, as part of a cross-sectional, online survey. The survey was distributed through social media (primarily Twitter and LinkedIn) and direct email to participants enrolled in life/biological/medical or physical/applied doctoral programs at U.S. institutions.
DOI: 10.6084/m9.figshare.14893116.v1
title: Modeling individual development plans, mentoring support, and career preparedness relationships among Ph.D. trainees in the life sciences

description: This study proposed two conceptual models to examine the interrelationships among the use of IDPs, mentoring support, and career preparedness with a diverse sample of doctoral students and postdoctoral researchers in the life sciences. The data leveraged for this study was collected over a three-month period, March 2016 to June 2016, as part of a cross-sectional, online survey. The survey was distributed through social media (primarily Twitter and LinkedIn) and direct email to participants enrolled in life/biological/medical or physical/applied doctoral programs at U.S. institutions.
DOI: 10.25345/c5dc2s
title: MassIVE MSV000087736 - HISTH3_Hawkins_BioID_2021-07-01
title: Files contain LC-MS data from proximity-dependent analysis (BioID) of protein interaction performed on Histone H3 in T-REx Flp-In HEK293 cells.
DOI: 10.35111/s2q7-gq73
title: Santa Barbara Corpus of Spoken American English Part I

description: <h3>Introduction</h3><br>
<p>The Santa Barbara Corpus of Spoken American English is based on hundreds of recordings of natural speech from all over the United States, representing a wide variety of people of different regional origins, ages, occupations, and ethnic and social backgrounds. It reflects many ways that people use language in their lives: conversation, gossip, arguments, on-the-job talk, card games, city council meetings, sales pitches, classroom lectures, political speeches, bedtime stories, sermons, weddings, and more.</p><br>
<h3>Data</h3><br>
<p>Part I contains 14 speech files of between 15-30 minutes each, from the Santa Barbara Corpus of Spoken American English. Collected by: University of California, Santa Barbara Center for the Study of Discourse, Director John W. Du Bois (UCSB), Associate Editors: Wallace L. Chafe (UCSB), Charlese Meyer (UMass, Boston), and Sandra A. Thompson (UCSB). The Santa Barbara Corpus of Spoken American English is part of the International Corpus of English (Charles W. Meyer, Director), representing the American Component.</p><br>
<p>Each speech file is accompanied by a transcript in which phrases are time stamped with respect to the audio recording. Personal names, place names, phone numbers, etc., in the transcripts have been altered to preserve the anonymity of the speakers and their acquaintances and the audio files have been filtered to make these portions of the recordings unrecognizable.</p><br>
<h3>Samples</h3><br>
<p>For an example of the data in this corpus, please examine these samples of the recordings and transcripts:</p><br>
<ul><br>
<li><a href="desc/addenda/LDC2000S85.wav" rel="nofollow">Speech </a></li><br>
<li><a href="desc/addenda/LDC2000S85.trn" rel="nofollow">Transcripts</a></li><br>
</ul><br>
<h3>Updates</h3><br>
<p>There are no updates at this time.</p></br>
DOI: 10.35111/j4qt-7y88
title: 1998 HUB4 Broadcast News Evaluation English Test Material

description: <h3>Introduction</h3><br>
<p>This publication contains the evaluation test material used in the 1998 DARPA/NIST Continuous Speech Recognition Broadcast News HUB4 English Benchmark Test administered by the <a href="http://www.nist.gov/speech" rel="nofollow"> NIST Spoken Natural Language Processing Group</a> and produced by the Linguistic Data Consortium (LDC), catalog number LDC2000S86, ISBN 1-58563-172-8.</p><br>
<h3>Data</h3><br>
<p>The test material is contained in two SPHERE-formatted waveform files. The file h4e_98_1.sph (set1) contains 1.5 hours of Broadcast News excerpts from 1996. The file h4e_98_2.sph (set2) contains 1.5 hours of Broadcast News excerpts from 1998. Each file should be separately recognized per the <a href="http://www.itl.nist.gov/iaui/894.01/tests/bnr/hub4_98/hub4e_98_spec.htm" rel="nofollow">HUB4 English Evaluation Specification</a>.</p><br>
<h3>Additional Licensing Instructions</h3><br>
<p>This 'members-only' corpora is available to current members who can request the data at the listed reduced-license fee. Contact <a href="mailto:ldc@ldc.upenn.edu">ldc@ldc.upenn.edu</a> for information about becoming a member.</p></br>
Portions © 1996 American Broadcasting Company, © 1996 Cable News Network, LP, LLLP, © 1996 Public Radio International, © 1996 The University of Southern California, USC Radio and Marketplace, © 2000 Trustees of the University of Pennsylvania