cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25550/3-jqmg
title: Ap2

description: **Abstract(s):** Failure of facial prominence fusion causes cleft lip and palate (CL/P), a common human birth defect. Several potential mechanisms can be envisioned that would result in CL/P, including failure of prominence growth and/or alignment as well as a failure of fusion of the juxtaposed epithelial seams. Here, the authors analyzed facial outgrowth and shape change over time in a novel mouse model exhibiting fully penetrant bilateral CL/P. This robust model is based upon mutations in Tfap2a, the gene encoding transcription factor AP-2α, which has been implicated in both syndromic and non-syndromic human CL/P. **Gene(s):** [Tfap2a](https://www.alliancegenome.org/gene/MGI:104671): Enables several functions, including DNA-binding transcription factor activity, RNA polymerase II-specific; transcription coactivator activity; and transcription corepressor activity. Involved in several processes, including camera-type eye development; cranial nerve development; and regulation of gene expression. Acts upstream of or within several processes, including animal organ development; embryonic morphogenesis; and face morphogenesis. Located in clathrin-coated pit and nucleus. Is expressed in several structures, including branchial arch; genitourinary system; limb; nervous system; and sensory organ. Used to study orofacial cleft. Human ortholog(s) of this gene implicated in branchiooculofacial syndrome. Orthologous to human TFAP2A (transcription factor AP-2 alpha).
DOI: 10.25550/3-jqmm
title: B9d

description: This dataset is currently unpublished but is in review. **Gene(s):** [B9d1](https://www.alliancegenome.org/gene/MGI:1351471): Enables hedgehog receptor activity. Acts upstream of or within several processes, including embryonic digit morphogenesis; neuroepithelial cell differentiation; and smoothened signaling pathway. Located in ciliary transition zone and membrane. Part of MKS complex. Is expressed in embryo. Used to study Meckel syndrome. Human ortholog(s) of this gene implicated in Joubert syndrome 27 and Meckel syndrome. Orthologous to human B9D1 (B9 domain containing 1).
DOI: 10.25550/3-jqmj
title: Aws

description: **Abstract(s):** Cleft lip (CL) and CL with cleft palate (CL/P) are part of the same group of birth defects of the primary palate of the face. This class of birth defects is present in 1:700-1:1000 live births and is one of the most common types of human birth defects. Clefts arise when the medial frontal nasal prominences fail to fuse with the lateral nasal and maxillary prominences. In humans, this fusion normally occurs around 6 to 7 weeks of gestation; however, in mouse models, it occurs around mid-gestation—about embryonic day (E) 12.5. Many, if not most, human birth defects have variable penetrance and expressivity. This phenomenon is especially obvious in CL/P malformations. In this paper, the authors developed a new protocol to measure morphology, gene expression, and DNA methylation in the same embryo. They related gene expression in an individual embryo directly to its three-dimensional morphology for the first time. The authors observed that methylation at the retrotransposon relates to Wnt9b expression and morphology. IAP methylation relates to shape of the nasal process in a manner consistent with clefting. Embryos with low IAP methylation exhibit increased among-individual variance in facial shape. **Gene(s):** [Wnt9b](https://www.alliancegenome.org/gene/MGI:1197020): Enables co-receptor binding activity and signaling receptor binding activity. Acts upstream of or within several processes, including Wnt signaling pathway; chordate embryonic development; and kidney development. Predicted to be located in extracellular region. Predicted to be part of Wnt-Frizzled-LRP5/6 complex. Predicted to be active in extracellular space. Is expressed in several structures, including central nervous system; epithelium; genitourinary system; heart; and surface ectoderm. Orthologous to human WNT9B (Wnt family member 9B).
DOI: 10.25550/3-jqmp
title: Nosip

description: **Abstract(s):** This dataset is currently unpublished but is in review. A larger, more comprehensive Nosip dataset will follow after publication of primary research. **Gene(s):** [Nosip](https://www.alliancegenome.org/gene/MGI:1913644): Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in negative regulation of nitric-oxide synthase activity. Predicted to be located in cytoplasm and nucleoplasm. Predicted to be active in nucleus. Used to study holoprosencephaly. Orthologous to human NOSIP (nitric oxide synthase interacting protein).
DOI: 10.17632/ssj7hwt5c2.1
title: Agile Software Development during the COVID-19 Pandemic: A Technology Company Survey

description: A common baseline is that Agile-based software development is conducted by co-located teams working in well-equipped office workspaces. The COVID-19 pandemic and subsequent lockdowns have cast new light on those assumptions. Suddenly, developers were no longer co-located with their teams and their well-equipped workspaces were vacant. How did the lockdowns, and the speed in which they were implemented, affect developers and development efforts? Did the lockdowns lead to diminished product quality? How was employee productivity impacted? A survey questionnaire was created to answer these questions.
DOI: 10.6084/m9.figshare.11637036
title: Human fetal brain expression SNP-weights for use in TWAS

description: Single nucleotide polymorphism (SNP)-weights for Ensembl gene and transcript-level expression were derived from genotyping and RNA sequencing data from 120 human fetal brains aged 12 – 19 post-conception weeks. Prior to deriving SNP-weights, gene- and transcript-level expression data were normalized and adjusted for sex, age, RIN, sequencing batch, 3 genotype principal components and 10 PEER factors. For a full description of the sample and data generation, please see: https://genomebiology.biomedcentral.com/articles/10.1186/s13059-018-1567-1Expression weights for use in transcriptome-wide association studies (TWAS) were derived using FUSION software (http://gusevlab.org/projects/fusion/#computing-your-own-functional-weights). SNP-weights were only generated for genes and transcripts with significant evidence of <i>cis</i>-heritable expression at the default <i>P</i>-value (<i>P</i> &lt; 0.01) in FUSION (1351 Ensembl genes and 3985 Ensembl transcripts). Note that the number of genes that will be testable by TWAS may differ as this will depend on the number of overlapping SNPs between the weights files and the GWAS summary statistics.<br>Expression weights were derived using only SNPs available in the FUSION LD reference (HapMap3 SNPs), in line with the FUSION protocol. Expression weights provided here are in the same format as weights downloaded from the FUSION website.<br>Use of these expression weights to perform TWAS of attention deficit hyperactivity disorder (ADHD), autism spectrum disorder, bipolar disorder, major depressive disorder and schizophrenia are described in Hall et al. '<i>Cis</i>-effects on gene expression in the human prenatal brain associated with genetic risk for neuropsychiatric disorders' <i>Molecular Psychiatry </i>(in press).<br>Files:- Ensembl gene level weights: op-fusion-fetal_brain-full_sample-gene_level.tar.gz - Ensembl transcript level weights: op-fusion-fetal_brain-full_sample-transcript_level.tar.gz<br><br>
DOI: 10.34696/p0y3-7f65
title: Performance Cartography, Performance Cartology: Multimedia Appendices

description: These are the multimedia appendices to Jacob Hart's thesis entitled "Performance Cartography, Performance Cartology: Musical networks for computational musicological analysis."
DOI: 10.48370/ofd/ftmdxp
title: Lophodermium pinastri (Schrad.) Chevall., 4163

description: Fungarium Micromycetes
DOI: 10.5281/zenodo.5524469
title: QTL mapping and transcriptome analysis of Sclerotinia-resistance in the wild cabbage species Brassica oleracea var. villosa [Main code]

description: This is the main code supplement for my computational analysis for the manuscript: "QTL mapping and transcriptome analysis of Sclerotinia-resistance in the wild cabbage species <em>Brassica oleracea </em>var<em>. villosa".</em> The main code is availabe in separate html-files. DOI will be added if available.
DOI: 10.5281/zenodo.4556802
title: QTL mapping and transcriptome analysis of Sclerotinia-resistance in the wild cabbage species Brassica oleracea var. villosa [Main code]

description: This is the main code supplement for my computational analysis for the manuscript: "QTL mapping and transcriptome analysis of Sclerotinia-resistance in the wild cabbage species <em>Brassica oleracea </em>var<em>. villosa".</em> The main code is availabe in separate html-files. DOI will be added if available.
DOI: 10.3886/icpsr09523.v1
title: Offender Based Transaction Statistics (OBTS), 1988: Alabama, Alaska, California, Delaware, Idaho, Kentucky, Minnesota, Missouri, Nebraska, New Jersey, New York, Oregon, Pennsylvania, Utah, Vermont, and Virginia
title: Version 1

description: Offender Based Transaction Statistics (OBTS) studies are designed to collect information by tracking adult offenders from the point of entry into the criminal justice system (typically by arrest) through final disposition, regardless of whether the offender is convicted or acquitted. Information is provided on arrest, police action, prosecutor action, level of charges, charges filed by the prosecutor, type of counsel, pretrial status, type of trial, sentence type, and sentence length. This allows researchers to examine how the criminal justice system processes offenders, to measure the changing volume of offenders moving through the different segments of the criminal justice system, to calculate processing time intervals between major decision-making events, and to assess the changing structure of the offender population.
description: ICPSR data undergo a confidentiality review and are altered when necessary to limit the risk of disclosure. ICPSR also routinely creates ready-to-go data files along with setups in the major statistical software formats as well as standard codebooks to accompany the data. In addition to these procedures, ICPSR performed the following processing steps for this data collection: Performed recodes and/or calculated derived variables.; Checked for undocumented or out-of-range codes..
description: Datasets: 
 
 DS1: Dataset
description: Offender Based Transaction Statistics (OBTS) Series
description: For reasons of confidentiality, the "day" variables in the dates have been blanked in the public release version of the data. Consequently, additional variables have been created to provide the elapsed time between the day of arrest and the days of the police disposition, the prosecutor/grand jury disposition, the final court disposition, and the sentencing date.
description: Persons in the United States who have achieved adult status (as specified by individual state laws) and who have been processed for felonies by the police, prosecutors, or courts, whether or not there is a final determination of guilt.
DOI: 10.3886/icpsr09527.v1
title: Integrated Postsecondary Education Data System (IPEDS): Institutional Characteristics, 1989-1990
title: Version 1

description: This collection offers data on basic characteristics of postsecondary institutions in the United States and covers institutional characteristics for 1989-1990. The data were used for sample design and selection for other IPEDS surveys. Key data elements include the name, address, and telephone number of the institution as well as information about levels of course offerings, calendar system, admissions requirements, student services, accreditation, modes of instruction, and institutional eligibility for student financial aid programs. Updated information on tuition and fees and room and board charges for the current academic year also is available. The unit of analysis is the postsecondary institution.
description: ICPSR data undergo a confidentiality review and are altered when necessary to limit the risk of disclosure. ICPSR also routinely creates ready-to-go data files along with setups in the major statistical software formats as well as standard codebooks to accompany the data. In addition to these procedures, ICPSR performed the following processing steps for this data collection: Checked for undocumented or out-of-range codes..
description: Datasets: 
 
 DS1: Dataset
description: Integrated Postsecondary Education Data System (IPEDS) Series
description: (1) The file consists of data derived from three distinct survey instruments. (2) The codebook and data collection instruments are provided as a Portable Document Format (PDF) file. The PDF file format was developed by Adobe Systems Incorporated and can be accessed using PDF reader software, such as the Adobe Acrobat Reader. Information on how to obtain a copy of the Acrobat Reader is provided through the ICPSR Website on the Internet.
description: All postsecondary institutions in operation in 1989-1990 in the United States, the District of Columbia, and outlying territories (American Samoa, Guam, Puerto Rico, the Virgin Islands, and the Marshall Islands) and Department of Defense schools outside the United States.
DOI: 10.3886/icpsr09548.v1
title: ANES 1990 Time Series Study
title: Version 1

description: This study is part of a time-series collection of national surveys fielded continuously since 1952. The election studies are designed to present data on Americans' social backgrounds, enduring political predispositions, social and political values, perceptions and evaluations of groups and candidates, opinions on questions of public policy, and participation in political life. For this collection, two forms of the survey instrument were used, with about 75 percent of the content being the same on both forms. Survey questions included the now standard National Election Studies battery of questions, along with items on presidential performance and the Persian Gulf conflict. Additionally, Form A contained questions relating to values and individualism, while Form B had content relating to foreign relations. The file also contains post-election vote validation and election administration survey data. Information is provided concerning sampling data, disposition of the case, control record variables, and information about the interviewer for the 1,980 interviews, plus nonsample and noninterview cases. Each of these records is associated with one or more call records that provide information on the date, day of the week, time of the call and its disposition, and the nature of the contact for those calls that resulted in contact with someone in the sample household.
description: ICPSR data undergo a confidentiality review and are altered when necessary to limit the risk of disclosure. ICPSR also routinely creates ready-to-go data files along with setups in the major statistical software formats as well as standard codebooks to accompany the data. In addition to these procedures, ICPSR performed the following processing steps for this data collection: Performed consistency checks.; Standardized missing values.; Performed recodes and/or calculated derived variables.; Checked for undocumented or out-of-range codes..
description: Datasets: 
 
 DS0: Study-Level Files 
 DS1: ANES 1990 Time Series Study 
 DS2: Auxiliary File: ANES 1990 Time Series Nonresponse/Bias File 
 DS3: Auxiliary File: ANES 1990 Time Series Call Record File
description: American National Election Study (ANES) Series
description: telephone interview 
Some numeric variables use coding schemes that allow for code values with a varying degree of digits. In such instances, the number of columns corresponding to the variable in the data file [.dat file] and in the column specifications will be the width of the maximum value occurring in the actual data, rather than the maximum width allowable by the coding scheme.
description: All United States citizens of voting age on or before November 6, 1990, residing in housing units other than on military reservations in the 48 coterminous states.
description: National multistage area probability sample.
DOI: 10.3886/icpsr09548.v2
title: ANES 1990 Time Series Study
title: Version 2

description: This study is part of a time-series collection of national surveys fielded continuously since 1952. The election studies are designed to present data on Americans' social backgrounds, enduring political predispositions, social and political values, perceptions and evaluations of groups and candidates, opinions on questions of public policy, and participation in political life. For this collection, two forms of the survey instrument were used, with about 75 percent of the content being the same on both forms. Survey questions included the now standard National Election Studies battery of questions, along with items on presidential performance and the Persian Gulf conflict. Additionally, Form A contained questions relating to values and individualism, while Form B had content relating to foreign relations. The file also contains post-election vote validation and election administration survey data. Information is provided concerning sampling data, disposition of the case, control record variables, and information about the interviewer for the 1,980 interviews, plus nonsample and noninterview cases. Each of these records is associated with one or more call records that provide information on the date, day of the week, time of the call and its disposition, and the nature of the contact for those calls that resulted in contact with someone in the sample household.
description: ICPSR data undergo a confidentiality review and are altered when necessary to limit the risk of disclosure. ICPSR also routinely creates ready-to-go data files along with setups in the major statistical software formats as well as standard codebooks to accompany the data. In addition to these procedures, ICPSR performed the following processing steps for this data collection: Performed consistency checks.; Standardized missing values.; Performed recodes and/or calculated derived variables.; Checked for undocumented or out-of-range codes..
description: Datasets: 
 
 DS0: Study-Level Files 
 DS1: ANES 1990 Time Series Study 
 DS2: Auxiliary File: ANES 1990 Time Series Nonresponse/Bias File 
 DS3: Auxiliary File: ANES 1990 Time Series Call Record File
description: American National Election Study (ANES) Series
description: telephone interview 
Some numeric variables use coding schemes that allow for code values with a varying degree of digits. In such instances, the number of columns corresponding to the variable in the data file [.dat file] and in the column specifications will be the width of the maximum value occurring in the actual data, rather than the maximum width allowable by the coding scheme.
description: All United States citizens of voting age on or before November 6, 1990, residing in housing units other than on military reservations in the 48 coterminous states.
description: National multistage area probability sample.
DOI: 10.3886/icpsr09574.v1
title: Recidivism of Felons on Probation, 1986-1989: [United States]
title: Version 1

description: This data collection provides an overview of how probation cases are processed in 32 urban and suburban jurisdictions in the United States and gauges the extent to which variations in probation patterns exist between jurisdictions. Data were collected on offenders who were sentenced in 1986 and who committed one or more of the following types of offenses: homicide, rape, robbery, aggravated assault, burglary, larceny, drug trafficking, and other felony crimes. Probation history questionnaires were completed during the last half of 1989. Information is available on number of conviction charges, race, age, sex, marital status, educational level, and ethnicity of the probationer. In addition, data on drug and alcohol use and treatment, sentencing, restitution, and offenses are provided.
description: ICPSR data undergo a confidentiality review and are altered when necessary to limit the risk of disclosure. ICPSR also routinely creates ready-to-go data files along with setups in the major statistical software formats as well as standard codebooks to accompany the data. In addition to these procedures, ICPSR performed the following processing steps for this data collection: Standardized missing values.; Performed recodes and/or calculated derived variables.; Checked for undocumented or out-of-range codes..
description: Datasets: 
 
 DS0: Study-Level Files 
 DS1: Data File 
 DS2: SAS Data Definition Statements
description: All probationers in the jurisdictions covered by NATIONAL JUDICIAL REPORTING PROGRAM, 1986: [UNITED STATES] (ICPSR 9073).
description: A representative sample for this data collection was based on NATIONAL JUDICIAL REPORTING PROGRAM, 1986: [UNITED STATES] (ICPSR 9073), which profiled all sentences meted out in each participating jurisdiction for 1986. A stratified random sample of these sentences was taken, based on the most serious conviction offense.
DOI: 10.14272/fiiqkfwicqqmia-qzqoticosa-n/ir
title: IR ((E)-Ethyl 4-(((1,3-dithiolan-2-ylidene)(phenyl)methyl)diazenyl)benzoate)

description: This is a dataset.
DOI: 10.14272/fiiqkfwicqqmia-qzqoticosa-n/mass/ei
title: Mass/EI ((E)-Ethyl 4-(((1,3-dithiolan-2-ylidene)(phenyl)methyl)diazenyl)benzoate)

description: This is a dataset.
DOI: 10.14272/jugloefolxmlen-ghvjwsgmsa-n
title: (E)-1-((1,3-Dithiolan-2-ylidene)(phenyl)methyl)-2-(4-bromonaphthalen-1-yl)diazene

description: This is a molecule publication.
DOI: 10.14272/jugloefolxmlen-ghvjwsgmsa-n/ir
title: IR ((E)-1-((1,3-Dithiolan-2-ylidene)(phenyl)methyl)-2-(4-bromonaphthalen-1-yl)diazene)

description: This is a dataset.
DOI: 10.14272/jugloefolxmlen-ghvjwsgmsa-n/mass/ei
title: Mass/EI ((E)-1-((1,3-Dithiolan-2-ylidene)(phenyl)methyl)-2-(4-bromonaphthalen-1-yl)diazene)

description: This is a dataset.
DOI: 10.14272/jugloefolxmlen-ghvjwsgmsa-n/nmr/13c/cdcl3/100
title: NMR/13C/CDCl3/100 ((E)-1-((1,3-Dithiolan-2-ylidene)(phenyl)methyl)-2-(4-bromonaphthalen-1-yl)diazene)

description: This is a dataset.
DOI: 10.14272/jugloefolxmlen-ghvjwsgmsa-n/nmr/1h/cdcl3/400
title: NMR/1H/CDCl3/400 ((E)-1-((1,3-Dithiolan-2-ylidene)(phenyl)methyl)-2-(4-bromonaphthalen-1-yl)diazene)

description: This is a dataset.
DOI: 10.14272/xxlmgnouxdirrq-wcwdxbqesa-n
title: (E)-1-((1,3-Dithiolan-2-ylidene)(phenyl)methyl)-2-(4-phenoxyphenyl)diazene

description: This is a molecule publication.
DOI: 10.14272/xxlmgnouxdirrq-wcwdxbqesa-n/nmr/13c/cdcl3/62.5
title: NMR/13C/CDCl3/62.5 ((E)-1-((1,3-Dithiolan-2-ylidene)(phenyl)methyl)-2-(4-phenoxyphenyl)diazene)

description: This is a dataset.
DOI: 10.14272/xxlmgnouxdirrq-wcwdxbqesa-n/nmr/1h/cdcl3/250
title: NMR/1H/CDCl3/250 ((E)-1-((1,3-Dithiolan-2-ylidene)(phenyl)methyl)-2-(4-phenoxyphenyl)diazene)

description: This is a dataset.