cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12928845
title: Gaussian Process Assisted Active Learning of Physical Laws

description: In many areas of science and engineering, discovering the governing differential equations from the noisy experimental data is an essential challenge. It is also a critical step in understanding the physical phenomena and prediction of the future behaviors of the systems. However, in many cases, it is expensive or time-consuming to collect experimental data. This article provides an active learning approach to estimate the unknown differential equations accurately with reduced experimental data size. We propose an adaptive design criterion combining the D-optimality and the maximin space-filling criterion. In contrast to active learning for other regression models, the D-optimality here requires the unknown solution of the differential equations and derivatives of the solution. We estimate the Gaussian process (GP) regression models from the available experimental data and use them as the surrogates of these unknown solution functions. The derivatives of the estimated GP models are derived and used to substitute the derivatives of the solution. Variable selection-based regression methods are used to learn the differential equations from the experimental data. Through multiple case studies, we demonstrate the proposed approach outperforms the D-optimality and the maximin space-filling design alone in terms of model accuracy and data economy.
DOI: 10.6084/m9.figshare.12928845.v1
title: Gaussian Process Assisted Active Learning of Physical Laws

description: In many areas of science and engineering, discovering the governing differential equations from the noisy experimental data is an essential challenge. It is also a critical step in understanding the physical phenomena and prediction of the future behaviors of the systems. However, in many cases, it is expensive or time-consuming to collect experimental data. This article provides an active learning approach to estimate the unknown differential equations accurately with reduced experimental data size. We propose an adaptive design criterion combining the D-optimality and the maximin space-filling criterion. In contrast to active learning for other regression models, the D-optimality here requires the unknown solution of the differential equations and derivatives of the solution. We estimate the Gaussian process (GP) regression models from the available experimental data and use them as the surrogates of these unknown solution functions. The derivatives of the estimated GP models are derived and used to substitute the derivatives of the solution. Variable selection-based regression methods are used to learn the differential equations from the experimental data. Through multiple case studies, we demonstrate the proposed approach outperforms the D-optimality and the maximin space-filling design alone in terms of model accuracy and data economy. The Supplementary Materials contain all the Matlab codes and data and are available online.
DOI: 10.6084/m9.figshare.15125508
title: Fig1B. γH2AX immunofluorescent staining of young and aged MAECs grown in NG and HG media

description: Fig.1B
DOI: 10.6084/m9.figshare.15125508.v1
title: Fig1B. γH2AX immunofluorescent staining of young and aged MAECs grown in NG and HG media

description: Fig.1B
DOI: 10.6084/m9.figshare.14455839
title: Named-Entities as a Metadata Resource for Indexing and Searching Information

description: This set contains 1126 documents extracted from texts of the newspaper A Tribuna, from Espírito Santo, and manually annotated. Regarding Named Entities, the following categories were adopted: Place (PLC), Organization (ORG), Person (PER), Time (TME), and Value (VAL). The file is in Extensible Markup Language (XML) format and divided by sentences. We also provide the file used in Apache Solr.
DOI: 10.6084/m9.figshare.12848187
title: Path-dependent bond-line evolution in equilibrated core honeycomb sandwich structures

description: During co-cure of honeycomb core sandwich panels, composite facesheets are cured and concurrently bonded to the core, introducing complex interactions that can lead to unsatisfactory bond-line formation. In this work, an <i>in situ</i> co-cure fixture is employed to directly observe the adhesive during processing and identify defect formation mechanisms specific to the bond-line. Relating fillet quality to imposed core pressure reveals the non-linear effect of core pressure. High pressures suppressed voids; intermediate pressures resulted in void growth and entrapment within deformed fillets; and low pressures led to void rupture and small, irregular fillets. Experimental results aided in developing a model to predict void growth in the bond-line. The findings presented here provide insight into the physics controlling the adhesive bond-line evolution during co-cure, which can inform manufacturing decisions to produce higher-quality honeycomb core sandwich structures.
DOI: 10.6084/m9.figshare.12848187.v2
title: Path-dependent bond-line evolution in equilibrated core honeycomb sandwich structures

description: During co-cure of honeycomb core sandwich panels, composite facesheets are cured and concurrently bonded to the core, introducing complex interactions that can lead to unsatisfactory bond-line formation. In this work, an <i>in situ</i> co-cure fixture is employed to directly observe the adhesive during processing and identify defect formation mechanisms specific to the bond-line. Relating fillet quality to imposed core pressure reveals the non-linear effect of core pressure. High pressures suppressed voids; intermediate pressures resulted in void growth and entrapment within deformed fillets; and low pressures led to void rupture and small, irregular fillets. Experimental results aided in developing a model to predict void growth in the bond-line. The findings presented here provide insight into the physics controlling the adhesive bond-line evolution during co-cure, which can inform manufacturing decisions to produce higher-quality honeycomb core sandwich structures.
DOI: 10.6084/m9.figshare.12848187.v1
title: Path-dependent bond-line evolution in equilibrated core honeycomb sandwich structures

description: During co-cure of honeycomb core sandwich panels, composite facesheets are cured and concurrently bonded to the core, introducing complex interactions that can lead to unsatisfactory bond-line formation. In this work, an <i>in situ</i> co-cure fixture is employed to directly observe the adhesive during processing and identify defect formation mechanisms specific to the bond-line. Relating fillet quality to imposed core pressure reveals the non-linear effect of core pressure. High pressures suppressed voids; intermediate pressures resulted in void growth and entrapment within deformed fillets; and low pressures led to void rupture and small, irregular fillets. Experimental results aided in developing a model to predict void growth in the bond-line. The findings presented here provide insight into the physics controlling the adhesive bond-line evolution during co-cure, which can inform manufacturing decisions to produce higher-quality honeycomb core sandwich structures.
DOI: 10.6084/m9.figshare.8145938
title: A single intravesical instillation of <i>Lactobacillus rhamnosus</i> GG is safe in children and adults with neuropathic bladder: A phase Ia clinical trial

description: <b>Context/objective:</b> Manipulation of the microbiome is an emerging approach to promote health. We conducted a Phase Ia safety study of a single bladder instillation of probiotics in asymptomatic patients with neuropathic bladder to determine the tolerability and safety of a single <i>Lactobacillus</i> instillation. <b>Design:</b> Phase Ia safety study. <b>Setting:</b> Outpatient rehabilitation clinic at a rehabilitation hospital (adults) and urology clinic at a free-standing children’s hospital (children). <b>Participants:</b> Ten patients with neuropathic bladder were included: five children with spina bifida and five adults with spinal cord injury. <b>Interventions:</b> A single <i>Lactobacillus rhamnosus</i> GG (Culturelle, 20 billion live organisms) instillation. <b>Outcome measures:</b> After the instillation, participants self-monitored symptoms using the Urinary Symptoms Questionnaire for People with Neuropathic Bladder using Intermittent Catheterization daily for one week. Repeat urinalysis, urine culture, and 16S bacterial rRNA-based microbiome analyses were performed 7–10 days after instillation. <b>Results:</b> Probiotic instillation was well-tolerated. One child had upper respiratory tract symptoms during the trial, and two had transient cloudy urine. No adults reported any symptoms following instillation. <i>Lactobacillus</i> did not grow on culture post-instillation. There were differences in beta diversity of the urine microbiome in children vs. adults with neuropathic bladder (P Lactobacillus was present in the pre-instillation urinary microbiomes all of the adults and 4 out of 5 of the pediatric subjects, and identified in 4 out of 5 of both the adult and pediatric subjects’ post-instillation urinary microbiomes. <b>Conclusion:</b> Intravesical instillation of Culturelle probiotic may be safe and well-tolerated in patients with neuropathic bladder.
DOI: 10.6084/m9.figshare.8145938.v3
title: A single intravesical instillation of <i>Lactobacillus rhamnosus</i> GG is safe in children and adults with neuropathic bladder: A phase Ia clinical trial

description: <b>Context/objective:</b> Manipulation of the microbiome is an emerging approach to promote health. We conducted a Phase Ia safety study of a single bladder instillation of probiotics in asymptomatic patients with neuropathic bladder to determine the tolerability and safety of a single <i>Lactobacillus</i> instillation. <b>Design:</b> Phase Ia safety study. <b>Setting:</b> Outpatient rehabilitation clinic at a rehabilitation hospital (adults) and urology clinic at a free-standing children’s hospital (children). <b>Participants:</b> Ten patients with neuropathic bladder were included: five children with spina bifida and five adults with spinal cord injury. <b>Interventions:</b> A single <i>Lactobacillus rhamnosus</i> GG (Culturelle, 20 billion live organisms) instillation. <b>Outcome measures:</b> After the instillation, participants self-monitored symptoms using the Urinary Symptoms Questionnaire for People with Neuropathic Bladder using Intermittent Catheterization daily for one week. Repeat urinalysis, urine culture, and 16S bacterial rRNA-based microbiome analyses were performed 7–10 days after instillation. <b>Results:</b> Probiotic instillation was well-tolerated. One child had upper respiratory tract symptoms during the trial, and two had transient cloudy urine. No adults reported any symptoms following instillation. <i>Lactobacillus</i> did not grow on culture post-instillation. There were differences in beta diversity of the urine microbiome in children vs. adults with neuropathic bladder (P Lactobacillus was present in the pre-instillation urinary microbiomes all of the adults and 4 out of 5 of the pediatric subjects, and identified in 4 out of 5 of both the adult and pediatric subjects’ post-instillation urinary microbiomes. <b>Conclusion:</b> Intravesical instillation of Culturelle probiotic may be safe and well-tolerated in patients with neuropathic bladder.
DOI: 10.6084/m9.figshare.15125547
title: Fig1C. mRNA levels of p21cip, p16INK4A and IL-6 of young and aged MAECs treated with NG and HG EC media

description: Fig.1C
DOI: 10.6084/m9.figshare.15125547.v1
title: Fig1C. mRNA levels of p21cip, p16INK4A and IL-6 of young and aged MAECs treated with NG and HG EC media

description: Fig.1C
DOI: 10.6084/m9.figshare.15125589
title: Fig1D. Western blots and cumulative data showing the effects of aging and HG on the levels of p21cip.

description: Fig. 1D
DOI: 10.6084/m9.figshare.15125589.v1
title: Fig1D. Western blots and cumulative data showing the effects of aging and HG on the levels of p21cip.

description: Fig. 1D
DOI: 10.6084/m9.figshare.15125595.v1
title: Fig1E. Western blots and cumulative data showing the effects of aging and HG on the levels of phospho-Rb

description: Fig. 1E
DOI: 10.6084/m9.figshare.15125595
title: Fig1E. Western blots and cumulative data showing the effects of aging and HG on the levels of phospho-Rb

description: Fig. 1E
DOI: 10.15468/zzwdgy
title: Morphology and Taxonomy of Isopoda Anthuroidea (Crustacea) from Sulawesi with description of six new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Annisaqois, Manikmayang, Wägele, J. Wolfgang (2021): Morphology and Taxonomy of Isopoda Anthuroidea (Crustacea) from Sulawesi with description of six new species. European Journal of Taxonomy 768: 1-52, DOI: https://doi.org/10.5852/ejt.2021.768.1501, URL: http://dx.doi.org/10.5852/ejt.2021.768.1501
DOI: 10.6084/m9.figshare.13286479.v2
title: A Random Fourier Feature Method for Emulating Computer Models with Gradient Information

description: Computer models with gradient information are increasingly used in engineering and science. The gradient-enhanced Gaussian process emulator can be used for emulating such models. Because the size of the covariance matrix increases proportionally with the dimension of inputs and the sample size, it is computationally challenging to fit such an emulator for large data sets. We propose a random Fourier feature method to mitigate this difficulty. The key idea of the proposed method is to employ random Fourier features to obtain an easily computable, low-dimensional feature representation for shift-invariant kernels involving gradients. The effectiveness of the proposed method is illustrated by several examples. Supplementary materials for this article are available online.
DOI: 10.18112/openneuro.ds003822.v1.0.0
title: Probabilistic Learning with Affective Feedback: Exp #1
DOI: 10.18112/openneuro.ds003753.v1.1.0
title: Probabilistic Learning with Affective Feedback: Exp #2
DOI: 10.18112/openneuro.ds003822.v1.1.0
title: Probabilistic Learning with Affective Feedback: Exp #1
DOI: 10.15468/u9w33g
title: Taxonomic study of the genus Etiella Zeller (Lepidoptera: Pyralidae: Phycitinae) in China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Liu, Hong-Xia, Li, Hou-Hun (2014): Taxonomic study of the genus Etiella Zeller (Lepidoptera: Pyralidae: Phycitinae) in China. Zoological Systematics 39 (1): 149-153, DOI: 10.11865/zs20140103
DOI: 10.3886/e151161
title: Quality of life among older adults who are incarcerated: A gendered pathways perspective

description: The purpose of this exploratory study was to examine gender differences in self-reported quality of life among older adults who are incarcerated (n=44). To examine the gender differences in quality of life among older adults who are incarcerated, secondary data were drawn from an earlier non-random, cross-sectional multiple methods study. Data here represent interview responses to select demographic and crime-related questions as well as the McGill Quality of Life Questionnaire-Cardiff Short Form (MQOL-CSF). We evaluated the mean differences of quality of life among men and women who are incarcerated, aged forty-eight to eighty-nine. Quality of life was assessed across a global measure and physical, psychological, and existential domains using the MQOL-CSF.
DOI: 10.3886/e151161v1
title: Quality of life among older adults who are incarcerated: A gendered pathways perspective

description: The purpose of this exploratory study was to examine gender differences in self-reported quality of life among older adults who are incarcerated (n=44). To examine the gender differences in quality of life among older adults who are incarcerated, secondary data were drawn from an earlier non-random, cross-sectional multiple methods study. Data here represent interview responses to select demographic and crime-related questions as well as the McGill Quality of Life Questionnaire-Cardiff Short Form (MQOL-CSF). We evaluated the mean differences of quality of life among men and women who are incarcerated, aged forty-eight to eighty-nine. Quality of life was assessed across a global measure and physical, psychological, and existential domains using the MQOL-CSF.
DOI: 10.5066/p9lwg1ec
title: High-resolution seismic data acquired at six seismic network recording stations in San Bernardino County, California in 2019

description: In May 2019, the U.S. Geological Survey acquired high resolution P- and S-wave seismic data near six seismic network recording stations in San Bernardino County, California: Southern California Seismic Network CI.CLT Calelectic, CI.MLS Mira Loma, CI.CJM Cajon Mountain and CI.HLN Highland; California Strong Motion Instrumentation Program station CE.23542; and US National Strong-Motion Network station NP.5326 (Figure 1). The primary goals of the seismic survey were to better understand the potential for amplified ground shaking, to evaluate lateral variability in shear-wave velocity, and to calculate Vs30 at these sites. We deployed up to 67 DTCC SmartSolo 3-component seismometer systems ("nodes") at 2-m spacing along six linear arrays and collocated P- and S-wave sources at ~1-m offset from the nodes. We generated active-source P-waves using a 3.5-kg sledgehammer and steel plate combination. Active-source S-waves were generated by horizontally striking an aluminum block with a 3.5-kg sledgehammer. SmartSolo nodes are standalone seismometers with 3-component sensors (5-Hz corner frequency and sensitivity of 76.7 volts/meter/second), battery, and built-in GPS to record location and time. The nodes recorded seismic data continuously at a 0.5-ms sampling rate, and shot timing was recorded by GPS event capture hardware to precisely determine the shot times. For some individual surveys, the nodes were buried a few inches below the ground surface to reduce noise. This report provides the metadata needed to utilize the seismic data. Acknowledgements: We thank Garet Huddleston, Dan Langermann, Carolyn Stieban, Zhenning Ma, Luther Strayer, and Chris Green for assistance in data acquisition. Reference: Barry, K.M., Cavers, D.A. and Kneale, C.W., 1975, Recommended standards for digital tape formats: Geophysics, vol. 40, no. 2, p. 344-352.
DOI: 10.6084/m9.figshare.16699963.v1
title: pre_covid_Aug2021.csv

description: Data that underlie the results reported in the article "T-cell responses to SARS-CoV-2 in unexposed South African women"
DOI: 10.6084/m9.figshare.16699963
title: pre_covid_Aug2021.csv

description: Data that underlie the results reported in the article "T-cell responses to SARS-CoV-2 in unexposed South African women"
DOI: 10.5066/p9eb4h6h
title: Data for Simulating the Effects of Air Temperature and Precipitation Changes on Streamflow and Water Temperature in the Meduxnekeag River Watershed, Maine

description: The U.S. Geological Survey (USGS), in cooperation with the Houlton Band of Maliseet Indians (HBMI), has developed tools to assess the effects climate change on hydrology and water temperatures in the Meduxnekeag River Watershed in Maine. A USGS Scientific Investigations Report (SIR) report documents tools and datasets developed by the USGS to evaluate how climate change will affect the hydrology and water temperature in the watershed. Future hydrologic climate projections were developed based on changes to the precipitation and air temperature input to the USGS Precipitation Runoff Modeling System (PRMS) (Markstrom and others, 2015) version 5.1.0. The baseline input data sets to the model were precipitation and air temperature data from 1980 to 2016. Future scenarios included increases in precipitation by 0-, 5- , 10, and 15-percent and increase in air temperature by 0, 3.6, 7.0, and 10.4 degrees Fahrenheit. The data include the input to and output from the PRMS model developed to provide streamflow and water temperature simulations under selected changes in air temperature and precipitation. The data also include shapefiles of the hydrologic response units and stream segments with identifiers matching those in the PRMS model. Markstrom, S.L., Regan, R.S., Hay, L.E., Viger, R.J., Webb, R.M.T., Payn, R.A., and LaFontaine, J.H., 2015, PRMS-IV, the precipitation-runoff modeling system, version 4: U.S. Geological Survey Techniques and Methods, book 6, chap. B7, 158 p., accessed October 1, 2018, at https://doi.org/10.3133/tm6B7.
DOI: 10.25919/tr4d-3d30
title: Parkes observations for project P1105 semester 2021APRS_02

description: We have re-processed all the observations in the Parkes pulsar data archive obtained during the first four years of the Parkes multibeam receiver and have developed a new artificial intelligence (AI) algorithm to investigate huge volume of candidates. Except for our previous detections, the latest results include 87 new fast radio burst (FRB) candidates with S/N above 7. These signals were only detected in a single beam of the receiver suggesting that they are unlikely to be terrestrial. Their dispersion measure (DM) excesses over the estimated Galactic DM place them at extragalactic distances. Using the Ultra Wideband Low (UWL) receiver we have opportunity to detect repeating signals from some of these FRB candidates. As all these signals were detected in the 20 cm band, the UWL provides the opportunity to observe stronger emission in other observing bands.
DOI: 10.5517/ccdc.csd.cc28jc4b
title: CCDC 2101091: Experimental Crystal Structure Determination

description: Related Article: Carl Thomas Bormann, Farzaneh Fadaei-Tirani, Rosario Scopelliti, Kay Severin|2021|Org.Biomol.Chem.|19|8113|doi:10.1039/D1OB01546J
DOI: 10.5517/ccdc.csd.cc28jc5c
title: CCDC 2101092: Experimental Crystal Structure Determination

description: Related Article: Carl Thomas Bormann, Farzaneh Fadaei-Tirani, Rosario Scopelliti, Kay Severin|2021|Org.Biomol.Chem.|19|8113|doi:10.1039/D1OB01546J
DOI: 10.5517/ccdc.csd.cc28jt9y
title: CCDC 2101530: Experimental Crystal Structure Determination

description: Related Article: Xue Wang, Mounib Bahri, Zhiwei Fu, Marc A. Little, Lunjie Liu, Hongjun Niu, Nigel D. Browning, Samantha Y. Chong, Linjiang Chen, John W. Ward, Andrew I. Cooper|2021|J.Am.Chem.Soc.|143|15011|doi:10.1021/jacs.1c08351
DOI: 10.5517/ccdc.csd.cc28jtbz
title: CCDC 2101531: Experimental Crystal Structure Determination

description: Related Article: Xue Wang, Mounib Bahri, Zhiwei Fu, Marc A. Little, Lunjie Liu, Hongjun Niu, Nigel D. Browning, Samantha Y. Chong, Linjiang Chen, John W. Ward, Andrew I. Cooper|2021|J.Am.Chem.Soc.|143|15011|doi:10.1021/jacs.1c08351
DOI: 10.6084/m9.figshare.15143979
title: Sup Fig4C. Effects of PPARγ siRNA (10 nmol/l) on PPARγ and p53 protein levels in HAECs

description: Sup Fig4C
DOI: 10.6084/m9.figshare.15143979.v1
title: Sup Fig4C. Effects of PPARγ siRNA (10 nmol/l) on PPARγ and p53 protein levels in HAECs

description: Sup Fig4C
DOI: 10.6084/m9.figshare.15143982.v1
title: Sup Fig4D. Effects of PPARγ siRNA (10 nmol/l) on SA-β-gal staining in HAECs

description: Sup Fig4D
DOI: 10.6084/m9.figshare.15143994
title: Sup Fig4E. Effects of PPARγ siRNA (10 nmol/l) on 24 hr wound healing of HAECs

description: Sup Fig4E
DOI: 10.6084/m9.figshare.15143994.v1
title: Sup Fig4E. Effects of PPARγ siRNA (10 nmol/l) on 24 hr wound healing of HAECs

description: Sup Fig4E
DOI: 10.6084/m9.figshare.15144033
title: Sup Fig5. Effects of Rsg (10 µmol/l) on HG-induced NOX1 in HAECs

description: Sup Fig5
DOI: 10.6084/m9.figshare.15144033.v1
title: Sup Fig5. Effects of Rsg (10 µmol/l) on HG-induced NOX1 in HAECs

description: Sup Fig5
DOI: 10.6084/m9.figshare.15143952.v1
title: Sup Fig4B. Immunofluorescence microscopy detection of lamin B1 (green) and p21cip (red) showing that HG reduced the level of lamin B1 and upregulated p21cip which was reversed by Rsg (10 µmol/l)

description: Sup Fig4B
DOI: 10.6084/m9.figshare.15143982
title: Sup Fig4D. Effects of PPARγ siRNA (10 nmol/l) on SA-β-gal staining in HAECs

description: Sup Fig4D