cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/hp2mjdkzss.1
title: The stability of 1,5-naphthalene disulfonate (1,5-NDS) and 2-naphthalene sulfonate (2-NSA) as a function of pH and salinity under geothermal conditions: Datasets

description: HPLC results of analysis of naphthalene sulfonates (1-NSA and 2-NSA) and naphthalene disulfonate (1,5-NDS). The compounds were exposed to diffrent pH, salinity and temperatures. Data invovle concnetrations in mol kg-1, time in day, pH values were measured at room temperature.
DOI: 10.6085/aa/lbs15x_015mtv2001r00_20110719.40.1
title: (:unkn)
DOI: 10.17632/rh7wd8v6rc.1
title: Rumor spread with self-generated signals - Simulation results

description: Tuchner, Tomer, and Gail Gilboa-Freedman. "Crying “Wolf” in a Network Structure: The Influence of Node-Generated Signals." International Conference on Complex Networks and Their Applications. Springer, Cham, 2019.‏
DOI: 10.17632/cd9yrcgrbd.2
title: Data for: Field scale quantification indicates potential for variability in return flows from flood irrigation in the high altitude western US

description: If data are used in publication, we request that you please cite: Gordon, B. L., Paige, G. B., Miller, S. N., Claes, N., & Parsekian, A. D. (2020). Field scale quantification indicates potential for variability in return flows from flood irrigation in the high altitude western US. Agricultural Water Management, 232, 106062 Readme: The included files are: Calculated Flow_NoLosses, Calculated_Losses, Calculated_Return_Flows, Crop_Growth_Cruve, ET_Not_Interpolated, Precipitation, Raw_Meteorological, and the readme. Included databases are: GIS information based on Trimble GPS, Raw Flow Data, including pressure transducer data and developed rating curves, Geophysical data, including Nuclear Magnetic Resonance, and Ground Penetrating Radar, and Scintillometry data, including raw downloads and footprint calculations. All the data (except GIS) are in tab delimited ASCII files. GIS data are in standard formats, most site specific information including soils, meadow delineation, instrumentation, etc. can be found in the site_information file. Flow data (Calculated_Flow, Calculated_Losses, Calculated_Return_Flows) were obtained using developed rating curves at each site, where each stilling well was instrumented with a pressure transducer (Level TROLL 500 Data Logger, In-Situ, USA) and manual flow measurements consisting of 25+ individual points for each measurement were made using an electromagnetic current meter (MF Pro, OTT Hydromet, USA). ET data include both measurements from a Large Aperture Scintillometer (LAS MKII, Kipp & Zonen, NLD) and from Penman-Monteith Calculations performed on raw meteorological data collected on site. For Penman-Monteith, we include both raw values and values modified using a crop coefficient from Pochop et al. (1992). Precipitation data were collected using a tipping bucket rain gauge (Rain Collector II, Davis Instruments, USA). All data (except the ET data for the scintillometer) are from May 2015 to October 2015; the ET data from the scintillometer are from June 2015 to October 2015. If you have any questions, please contact me via email at: beatrice.gordon1@gmail.com
DOI: 10.17632/99yhdvj93x.1
title: Peak ground velocity from dense seismic array in southern California
DOI: 10.17632/gn3bmf4b6m.1
title: LiFePO4_S cathode proof 2020_02

description: Origin graph files of the manuscript LiFePO4_S cathode proof. Figure 1 Cyclic Voltammetry of LiFePO4-S composite with LiPF6 electrolyte. Figure 2 Cyclic Voltammetry of LiFePO4-S composite with LiTFSI electrolyte. Figure 3 dQ/dV curves calculated from charge/discharge cycling data of the LiFePO4-S composite cathode with LiTFSI electrolyte: Lithiation in cycle 3 (a) and cycle 5 (b), and delithiation in cycle 3 (c) and cycle 5 (d). Figure 5 XRD pattern of hydrothermal carbon - LiFePO4 composite prepared in acetic acid. The pattern of LiFePO4 without carbon coating is shown as a reference. * Peak corresponding to graphitic carbon. Figure 6 Raman spectrum of hydrothermal carbon-LiFePO4 composite after thermal treatment at 650 °C. The Raman spectrum of LiFePO4 reagent without carbon coating is shown as a reference. Figure 7 dQ/dV curves calculated from charge/discharge cycling data of composite cathodes of carbon-coated LiFePO4 (prepared in acetic acid) and sulfur infiltrated in porous carbon: Lithiation in cycle 3 (a) and cycle 5 (b), and delithiation in cycle 3 (c) and cycle 5 (d).
DOI: 10.17632/5sdnbktpg6.1
title: A study of: Selective PP2A enhancement through biased heterotrimer stabilization. Leonard D, Huang W, et al.

description: Here we define the structural and biological basis by which a class of small molecules (lead compound denoted DT-061), selectively binds and stabilizes a single B-subunit containing Protein Phosphatase 2A (PP2A) heterotrimer to drive the targeted dephosphorylation of select PP2A substrates that include c-MYC. This work provides structural and molecular insights into PP2A holoenzyme regulation, identifies a new therapeutic strategy for protein complex targeting and activation, and presents a basis for phosphatase activating therapeutics.
DOI: 10.17632/rmzfz37tmw.1
title: 2018-2019 Comparison of Nontechnical Skills Grading Rubrics for OR In Situ Simulation for General Surgery and Ob/Gyn Resident Data

description: 2018-2019 Comparison of Nontechnical Skills Grading Rubrics for OR In Situ Simulation for General Surgery and Ob/Gyn Residents Data. This data consists of the Likert scale grading of participants in an in situ simulation for their confidence in handling an intraoperative PE and intraoperative anaphylactic shock as well as their knowledge of the TeamSTEPPS® rubric. Additionally, this data set contains survey data on their awareness of the crisis resources at our hospital, namely a crisis checklist and our safety fellow. Finally, this data contains the grades of 2 independent observers who monitored the simulations and used the TPOT® and NOTSS® rubric to grade their team performance.
DOI: 10.5281/zenodo.3690050
title: Complex k-Uniform Tilings by a Simple Bitopic Precursor Self-Assembled on Ag(001)_experimental dataset

description: This experimental dataset contains the raw underlying data for the article "Complex k-Uniform Tilings by a Simple Bitopic Precursor Self-Assembled on Ag(001) Surface" by Lukáš Kormoš, Pavel Procházka, Anton O. Makoveev, and Jan Čechal.
description: This research was co-funded by the European Union's Horizon 2020 Research and Innovation Programme under the Grant Agreement No. 810626.
DOI: 10.5281/zenodo.3690051
title: Complex k-Uniform Tilings by a Simple Bitopic Precursor Self-Assembled on Ag(001) Surface_XPS experimental dataset

description: This experimental dataset contains the raw underlying data on XPS for the article "Complex k-Uniform Tilings by a Simple Bitopic Precursor Self-Assembled on Ag(001) Surface" by Lukáš Kormoš, Pavel Procházka, Anton O. Makoveev, and Jan Čechal.
description: This research was co-funded by the European Union's Horizon 2020 Research and Innovation Programme under the Grant Agreement No. 810626.
DOI: 10.17632/nmkwzz42k5.4
title: Dataset for Ranking of Renewable Energy Sources Using Delphi-MGDM Framework

description: The data sets are part of the study titled "A web-based Delphi multi-criteria group decision-making framework for renewable energy project development processes." The study aims to outline and implement the web-based Delphi Multi-criteria Group Decision Making (Delphi-MGDM) Framework, which is intended to facilitate top-level group decision-making for renewable energy project development and long-term strategic direction setting. The datasets include: (1) the weights of criteria obtained from judgments of the experts, (2) the summary of criteria scores, (3) the comparison table dataset, and (4) the full report of the Visual PROMETHEE. “Criteria Weighing Dataset” is obtained from the judgment of experts using the AHP-Online System created by Klaus D. Goepel (available at https://bpmsg.com/ahp/ahp.php). On a pairwise comparison basis, we asked the experts to make their opinion on four (4) criteria and then the sixteen (16) sub-criteria in three rounds. The group weights after the third round are considered the final weights of criteria and sub-criteria. To rank RES using MCDA, we used the data from the literature and the Philippines’ DOE for all ten quantitative sub-criteria. However, there are six qualitative sub-criteria, so we asked the opinion of experts on how solar, wind, biomass, and hydro-power are performing in each criterion based on their knowledge and expertise. This time, we used a self-derived questionnaire and as a summary of this process, we produced the “Scoring of Options Dataset.” We got the average, minimum and maximum values of the scores to make data for the ranking in three cases (realistic, pessimistic, and optimistic). "Comparison table" dataset is composed of comparison tables for the three cases. Table A reflects the data for realistic case in which we use the averages of the qualitative inputs from experts, the averages of quantitative data obtained in ranges, and the actual value of data not given in ranges. Table B reflects the data for the optimistic case. For qualitative data, we used the minimum value of the sub-criteria to be minimized and maximum value for sub-criteria to maximized. For quantitative data in ranges, we used the minimum value of cost sub-criteria and maximum value of benefit sub-criteria. We estimated fictitious data for some quantitative data not given in ranges. Table C reflects the data for the pessimistic case. We used the same concept with Table B, but with opposite choices. For instance, we used the maximum value of cost sub-criteria and minimum value of benefit sub-criteria for quantitative data. Finally, we used Visual PROMETHEE (available at http://www.promethee-gaia.net/vpa.html) to rank renewable energy sources. The "Visual PROMETHEE Full Report" dataset is the actual report exported from the Visual PROMETHEE application – containing a partial and complete ranking of RES.
DOI: 10.17632/jxrctjpxw2.1
title: Mystery patient evaluation of counseling quality offered by community pharmacists

description: The data presented here were collected in Ibadan metropolis, Ibadan Nigeria in 2019 using six standardized mystery patients. the data shows baseline evaluation of counseling provided by community pharmacists when visited by patients on warfarin. the educational intervention was offered in the form of an online training module on oral anticoagulant counseling. After the training, the community pharmacists were again evaluated for the quality of counseling offered to mystery patients of warfarin. These are SPSS data sets
DOI: 10.17632/jxrctjpxw2.2
title: Mystery patient evaluation of counseling quality offered by community pharmacists

description: The data presented here were collected in Ibadan metropolis, Ibadan Nigeria in 2019 using six standardized mystery patients. the data shows baseline evaluation of counseling provided by community pharmacists when visited by patients on warfarin. the educational intervention was offered in the form of an online training module on oral anticoagulant counseling. After the training, the community pharmacists were again evaluated for the quality of counseling offered to mystery patients of warfarin. These are SPSS data sets
DOI: 10.17632/s2v6868hc3.1
title: Data_Hebb_children

description: Data from the Manuscript submited to HBM in February 27th 2020. Behavioral and fMRI data
DOI: 10.17632/jxrctjpxw2.3
title: Mystery patient evaluation of counseling quality offered by community pharmacists

description: The data presented here were collected in Ibadan metropolis, Ibadan Nigeria in 2019 using six standardized mystery patients. the data shows baseline evaluation of counseling provided by community pharmacists when visited by patients on warfarin. the educational intervention was offered in the form of an online training module on oral anticoagulant counseling. After the training, the community pharmacists were again evaluated for the quality of counseling offered to mystery patients of warfarin. These are SPSS data sets
DOI: 10.17632/xg237bzyxb.1
title: Ground-roll separation using intelligence based-matching method

description: Separation is achieved by intelligence based-matching of the curvelet coefficients.
DOI: 10.17632/ygvhvjzyz3.1
title: Local Improvement Districts as Political Participation Signals

description: Improvement District and Political Participation Study
DOI: 10.17632/mhmvnm5wwg.1
title: Retinal Proteomics of Experimental Glaucoma Model Reveal Intra-Ocular Pressure Induced Mediators of Neurodegenerative changes

description: Current evidence suggests that exposure to chronically induced intraocular pressure (IOP) leads to neurodegenerative changes in the inner retina. This study aimed to determine retinal proteomic alterations in a rat model of glaucoma and compared findings with human retinal proteomics changes in glaucoma reported previously. We developed an experimental glaucoma rat model by subjecting the rats to increased IOP (9.3±0.1 vs 20.8±1.6 mm Hg) by weekly microbead injections into the eye (8 weeks). The retinal tissues were harvested from control and glaucomatous eyes and protein expression changes analysed using multiplexed quantitative proteomics approach. Immunofluorescence was performed for selected protein markers for data validation. Our study identified 4304 proteins in the rat retinas. Out of these, 139 proteins were downregulated (≤0.83) while expression of 109 proteins was upregulated (≥1.2-fold change) under glaucoma conditions (p≤0.05). Computational analysis revealed reduced expression of proteins associated with glutathione metabolism, mitochondrial dysfunction/oxidative phosphorylation, cytoskeleton and actin filament organisation, along with increased expression coagulation cascade, apoptosis, oxidative stress and RNA processing markers. Further functional network analysis highlighted the differential modulation of nuclear receptor signalling, cellular survival, protein synthesis, transport and cellular assembly pathways. Alterations in crystallin family, glutathione metabolism and mitochondrial dysfunction associated proteins shared similarities between the animal model of glaucoma and the human disease condition. In contrast, the activation of the classical complement pathway and upregulation of cholesterol transport proteins, were exclusive to the human glaucoma. These findings provide insights into the neurodegenerative mechanisms that are specifically affected in the retina in response to chronically elevated IOP.
DOI: 10.17632/hhk764fmsz.2
title: Data of Noise Level in Different Industries of Khulna CIty, Bangladesh

description: This dataset is prepared in Microsoft Excel 2013. The values of sound for an 8-hour work shift in dBs in/around different industries of Khulna city, Bangladesh were directly noted using an environmental meter (model: DT8820). The physiological and psychological effects of noise pollution on workers' health is analyzed based on a questionnaire survey containing questions about the detrimental effects of noise the workers were facing.
DOI: 10.17632/yypbkpxkx3.1
title: Visualizing the role of boundary elements in enhancer-promoter communication

description: Raw images of in situ hybridization and PCR analysis
DOI: 10.17632/hbmt435zs7.3
title: Data of GHGs from the sites in China

description: in-situ observation data at the Mt. Waliguan and Shangri-La
DOI: 10.17632/7m4m8yhkfd.1
title: Data of: Testing the relationship between real exchange rate and vertically integrated unit labour cost. An econometric analysis from NAFTA
DOI: 10.25345/c5qq4s
title: MassIVE MSV000085029 - MitoPlex: A Targeted Multiple Reaction Monitoring Assay for Quantification of a Curated Set of Mitochondrial Proteins
title: Mitochondria are the major source of cellular energy (ATP), as well as critical mediators of widespread functions such as cellular redox balance, apoptosis, and metabolic flux. The organelles play an especially important role in the maintenance of cardiac homeostasis; their inability to generate ATP following impairment due to ischemic damage has been directly linked to organ failure. Methods to quantify mitochondrial content are limited to low throughput immunoassays, measurement of mitochondrial DNA, or relative quantification by untargeted mass spectrometry. Here, we present a high throughput, reproducible and quantitative mass spectrometry multiple reaction monitoring based assay of 37 proteins critical to central carbon chain metabolism and overall mitochondrial function termed MitoPlex. We coupled this protein multiplex with a parallel analysis of the central carbon chain metabolites (218 metabolite assay) extracted in tandem from the same sample, be it cells or tissue. In tests of its biological applicability in cells and tissues, MitoPlex plus metabolites indicated profound effects of HMG-CoA Reductase inhibition (e.g., statin treatment) on mitochondria of i) differentiating C2C12 skeletal myoblasts, as well as a clear opposite trend of statins to promote mitochondrial protein expression and metabolism in heart and liver, while suppressing mitochondrial protein and ii) aspects of metabolism in the skeletal muscle obtained from C57Bl6 mice. Our results not only reveal new insights into the metabolic effect of statins in skeletal muscle, but present a new high throughput, reliable MS-based tool to study mitochondrial dynamics in both cell culture and in vivo models.
DOI: 10.17632/r87947jmw8.1
title: Model for identifying life-cycle environmental and cost-effective energy retrofitting measures for the existing office stock

description: Model for identifying optimal energy retrofitting measures for the existing office stock, by assessing the energy, economic and environmental impact with a life cycle approach. Representative offices include office blocks and offices in industrial buildings and offices in residential buildings.
DOI: 10.26300/y5ep-4j46
title: Lunar temperature-dependent surface changes at 1064 nm
DOI: 10.5281/zenodo.3688797
title: Data for "A possible explanation of interhemispheric asymmetry of Equatorial Plasma Bubbles in airglow images"

description: This is the data used in the paper "A possible explanation of interhemispheric asymmetry of Equatorial Plasma Bubbles in airglow images" by Hickey et al. (2020). Ionograms from Hyderabad and Tirunelveli are provided as PDFs. 7 MHz reflection heights from both ionosondes are provide in tab delimeted text file. A raw all-sky image is provided as a .tif file. Unwrapped all-sky images are provided as .tif files at 250, 275, and 300 km emission altitudes. The raw and unwrapped data for these images are provide in .dat files.
DOI: 10.5281/zenodo.3688796
title: Data for "A possible explanation of interhemispheric asymmetry of Equatorial Plasma Bubbles in airglow images"

description: This is the data used in the paper "A possible explanation of interhemispheric asymmetry of Equatorial Plasma Bubbles in airglow images" by Hickey et al. (2020). Ionograms from Hyderabad and Tirunelveli are provided as PDFs. 7 MHz reflection heights from both ionosondes are provide in tab delimeted text file. A raw all-sky image is provided as a .tif file. Unwrapped all-sky images are provided as .tif files at 250, 275, and 300 km emission altitudes. The raw and unwrapped data for these images are provide in .dat files.
DOI: 10.17632/52bpdw6y2c.1
title: Differential scaling of gene expression with cell size may explain size control in budding yeast.

description: Raw data of Western blots and cell micrographs
DOI: 10.17632/dr7d5xkcrs.1
title: Research data （Normalized data）of flood disaster risk

description: Normalized data for research on flood disaster risk in the Yangtze River Delta
DOI: 10.5281/zenodo.3689693
title: Arsenic adsorption modelling: TiO2, Fe2O3 and composite TiO2-Fe2O3 sorbents - detailed characterisation and adsorption data sets

description: Raw data, example files and templates for the research paper provisionally titled 'Improved Accuracy in the Surface Complexation Modelling of Arsenic on Multicomponent Sorbents Using Low Energy Ion Scattering' Included is materials characterisation data (TiO2, Fe2O3 and a TiO2-Fe2O3 composite) arsenic(III) and arsenic(V) adsorption data (both adsorption isotherms and pH adsorption edges) potentiometric titration data templates for preparing FITEQL input files from titration data and pH adsorption edges examples of FITEQL input and output files Characterisation techniques used include BET, XRD, FTIR, zeta potential, DLS, low energy ion scattering (LEIS), XPS and XRF. Data was primarily collected by Jay Bullen between 2016 and 2019, with assistance from named collaborators.
DOI: 10.5281/zenodo.10621232
title: Many purported pseudogenes in bacterial genomes are bonafide genes -- SRA Survey

description: Generated annotations, assemblies, and final comparison data for a figure generated on the advice of a reviewer for the manuscript 'Many purported pseudogenes in bacterial genomes are bonafide genes'. In short, real SRA reads with extremely deep coverage were identified and reassemblied at varying target coverage depths to investigate how an experiment performed with simulated data behaves with real data.
DOI: 10.5281/zenodo.10621233
title: Many purported pseudogenes in bacterial genomes are bonafide genes -- SRA Survey

description: Generated annotations, assemblies, and final comparison data for a figure generated on the advice of a reviewer for the manuscript 'Many purported pseudogenes in bacterial genomes are bonafide genes'. In short, real SRA reads with extremely deep coverage were identified and reassemblied at varying target coverage depths to investigate how an experiment performed with simulated data behaves with real data.
DOI: 10.34740/kaggle/dsv/7565076
title: PC Parts Images Dataset [Classification]
DOI: 10.6084/m9.figshare.23298467
title: ORDerly benchmarks of chemical reactions

description: Benchmark datasets generated with ORDerly for chemical reaction prediction tasksORDerly-forward: Forward reaction prediction (predict reaction products given reactants, solvents, and agents)ORDerly-retro: Retrosynthesis prediction (prediction reactants given a desired product)ORDerly-condition: Reaction condition prediction (predict solvents and agents given reactants and products). Note that reactions with rare solvents and agents (frequency &lt;100) have been removed.ORDerly-condition-with-rare: Reaction condition prediction (predict solvents and agents given reactants and products). Reactions with rare solvents and agents have not been removed.Config: Contains the .log and .json files showing the parameters used in cleaning and the impact on dataset size after each cleaning step.Note that all datasets here were created using the reaction string and our chemically informed logic to assign reaction roles.Paper: https://chemrxiv.org/engage/chemrxiv/article-details/64ca5d3e4a3f7d0c0d78ca42Neurips workshop paper: https://openreview.net/forum?id=R8FQMsECISCode: https://github.com/sustainable-processes/orderlyThe supplementary datasets used for this work can be found here: https://doi.org/10.6084/m9.figshare.23502372.v3Feel free to email me, Daniel Wigh, at dsw46@cam.ac.uk or my supervisor Alexei A. Lapkin.<br><br>