cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.qr5f62
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gavia adamsii, Gavia adamsii, Gavia adamsii, Gavia adamsii, Gavia adamsii, Gavia adamsii, Gavia adamsii, Gavia adamsii (Gray, 1859), Gavia adamsii (Gray, 1859), Gavia adamsii Gray, 1859, Gavia adamsii (Gray, 1859), Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (Gray, 1859), Gavia adamsii (Gray, 1859), Gavia adamsii (Gray, 1859), Gavia adamsii (Gray, 1859), Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (Gray, 1859), Gavia adamsii G.R.Gray, 1859, Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (Gray, 1859), Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (Gray, 1859), Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (G.R.Gray, 1859), Gavia adamsii (G.R. Gray, 1859), Gavia adamsii (G.R. Grey, 1859), Gavia adamsii (G.R. Gray, 1859), Gavia adamsii (G. R. Gray, 1859), Gavia adamsii (J E Gray, 1859), Gavia immer (Brunnich, 1764), Bubo scandiacus (Linnaeus, 1758), Colymbus adamsii G.R.Gray, 1859, Colymbus adamsii G.R.Gray, 1859, Colymbus adamsii Gray, 1859, Colymbus adamsii G.R.Gray, 1859, Colymbus adamsii Gray, 1859)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Country is one of (China, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 28 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032326-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27284259
title: Source_Data_Ning_et_al

description: A copy of source data for a Nature Electronics paper.
DOI: 10.5281/zenodo.13982845
title: Analyzing the Impact of Copying-and-Pasting Vulnerable Solidity Code Snippets from Question-and-Answer Websites

description: This data comprises all input and output, including intermediate results for the evaluation of the tool cpg-contract-checker(CCC) and the crawled data and results for the study published under the name "Analyzing the Impact of Copying-and-Pasting Vulnerable Solidity Code Snippets from Question-and-Answer Websites".We conducted a study on the impact of vulnerable code reuse from Q&A websites during the development of smart contracts and provided tools uniquely fit to detect vulnerable code patterns in complete and incomplete Smart Contract code. The paper proposes a pattern-based vulnerability detection tool that is able to analyze code snippets (i.e., incomplete code) as well as full smart contracts based on the concept of code property graphs. We also propose a methodology that leverages fuzzy hashing to quickly detect code clones of vulnerable snippets among deployed smart contracts. Our results show that our vulnerability search, as well as our code clone detection, are comparable to state-of-the-art while being applicable to code snippets. The tools are used to realize a study pipeline for which the dataset and (intermediate) results are contained in this archive.
DOI: 10.5281/zenodo.13982846
title: Analyzing the Impact of Copying-and-Pasting Vulnerable Solidity Code Snippets from Question-and-Answer Websites

description: This data comprises all input and output, including intermediate results for the evaluation of the tool cpg-contract-checker(CCC) and the crawled data and results for the study published under the name "Analyzing the Impact of Copying-and-Pasting Vulnerable Solidity Code Snippets from Question-and-Answer Websites".We conducted a study on the impact of vulnerable code reuse from Q&A websites during the development of smart contracts and provided tools uniquely fit to detect vulnerable code patterns in complete and incomplete Smart Contract code. The paper proposes a pattern-based vulnerability detection tool that is able to analyze code snippets (i.e., incomplete code) as well as full smart contracts based on the concept of code property graphs. We also propose a methodology that leverages fuzzy hashing to quickly detect code clones of vulnerable snippets among deployed smart contracts. Our results show that our vulnerability search, as well as our code clone detection, are comparable to state-of-the-art while being applicable to code snippets. The tools are used to realize a study pipeline for which the dataset and (intermediate) results are contained in this archive.
DOI: 10.23729/edf3772f-05bc-4acb-a5ff-9ae60084063a
title: FIB-SEM datasets of hippocampal neurons (DG region) in WT and FAM92A1 KO mice

description: Mice were deeply anesthetized with an overdose of isoflurane and transcardially perfused with PBS followed by ice-cold 2% PFA in PBS. The brains were quickly removed and cut into coronal sections with 300 μm thickness using a vibratome in ice-cold 0.1 M sodium phosphate buffer (pH 7.4), supplemented with 2 mM CaCl2. The hippocampus area was dissected from the coronal sections, and further fixed with 2% GA and 2% PFA in 0.1 M sodium phosphate buffer, supplemented with 2 mM CaCl2 at 4 °C for 3 h. The samples were stored in 2% PFA in 0.1 M NaCac prior further processing. The samples were then washed with 0.1 M NaCac (pH 7.4) and osmicated with 2% osmium tetroxide in 0.1 M NaCac for 1.5 h, followed by 2.5% ferrocyanide in 0.1 M NaCac for another 1.5 h. After washes with water, the samples were immersed with 1% thiocarbohydrazide at 40 °C for 30 min followed by treatments with 1% unbuffered osmium for 1 h, and 1% UA in water at 4 °C overnight. Between the treatments, the samples were washed with ion-exchanged water 5 times for 5 min. For embedding, samples were dehydrated through a graded ethanol series into pure acetone followed by gradual infiltration into Durcupan™ according to the manufacturer’s instructions. After polymerization at 60 °C for 48 h, the embedded samples were trimmed and mounted on aluminum pins with conductive glue, prior to coating the exposed hippocampal surface with a thin layer of platinum.

The target volumes in the hippocampus were imaged by a Zeiss FIB-SEM using a 2.5 nm pixel size with 5 nm milling depth. The SEM micrographs were acquired with 0.31 nA electron beam, 1.3 or 1.4 keV, dwell time 2 − 3 µs with 1 − 2 times line averaging. Both backscattered and secondary electron signals were collected using Inlens detectors. The new surface for serial FIB-SEM imaging was generated by FIB milling with a 0.7 nA beam current at an acceleration voltage of 30 kV. The datasets were collected and aligned using Zeiss Atlas 5 software with a 3D tomography module. The representative synapses in the electron microscopy data sets generated were manually segmented using MIB software, and the vesicles and endosomal structures which were located mostly in the volume covering the depth of 300 µm were included in the models. Visualization of the models was done by Amira software.

Also dataset from WT mouse with 10 nm pixel, slicing 10 nm.
DOI: 10.15468/dl.t2grbd
title: Occurrence Download

description: A dataset containing 106 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-75.76629 45.35493,-75.76465 45.35302,-75.76033 45.35494,-75.76078 45.36038,-75.76638 45.35839,-75.76629 45.35493))"
 ]
}

 The dataset includes 106 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032327-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5tde95
title: Occurrence Download

description: A dataset containing 5252 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Corvus leucognaphalus Daudin, 1800"
 ]
}

 The dataset includes 5252 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032328-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qftspd
title: Occurrence Download

description: A dataset containing 530 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Podiceps auritus, Podiceps auritus, Podiceps auritus (Linnaeus, 1758), Podiceps auritus Linnaeus, 1758, Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus, Podiceps auritus, Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus, Podiceps auritus, Podiceps auritus, Podiceps auritus, Podiceps auritus, Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Podiceps auritus (Linnaeus, 1758), Aquanirmus colymbinus (Scopoli 1763), Aquanirmus colymbinus (Scopoli, 1763), Bubo scandiacus (Linnaeus, 1758), Podiceps cornutus Linnaeus, Fulica pisana (Portis, 1887), Colymbus auritus Linnaeus, 1758, Colymbus auritus, Podiceps cornutus Linnaeus, Podiceps howardae Storer, 2001, Podicipes auritus (Linnaeus, 1758), Pliodytes lanquisti (Brodkorb, 1953), Colymbus auritus Linnaeus, 1758, Colymbus auritus, Colymbus auritus Linnaeus, 1758, Podiceps pisanus (Portis, 1887), Podicipes auritus (Linnaeus, 1758), Colymbus auritus Linnaeus, 1758, Colymbus lanquisti (Brodkorb, 1953), Colymbus auritus Linnaeus, 1758, Colymbus auritus Linnaeus, 1758, Colymbus auritus Linnaeus, 1758)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Country is one of (China, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 530 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032329-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7924/r44j0qd59
title: Data from: Deep learning for accelerated all-dielectric metasurface design

description: Deep learning has risen to the forefront of many fields in recent years, overcoming challenges previously considered intractable with conventional means. Materials discovery and optimization is one such field. However, the metamaterials community currently lacks access to large datasets for training models. This dataset aims to fill this gap by providing approximately 21,000 simulated spectra for different geometric configurations of all-dielectric metasurfaces. For the geometry of the metamaterial, it is a supercell ADM comprised of four cylindrical unit cells. Each unit-cell cylinder is parameterized by a radius and a height (two parameters), yielding an 8-dimensional parameterization, x, for the geometry of the supercell. We select silicon (Si) for the metasurface material and, with no loss of generality, embed it within a vacuum for faster training set acquisition.
DOI: 10.48796/20240313-000
title: Tibetan Modern U-chen Print (TMUP) 0.1: Training Data for a Transkribus HTR Model for Modern Tibetan Printed Texts

description: Tibetan Modern U-chen Print 0.1 (TMUP 0.1) is the first Transkribus model for printed Tibetan language publications in Uchen (དབུ་ཅན་ dbu can) script (Model ID 60669). It has been trained mainly on texts that were published in the PRC between the 1950s and 1980s. The repository contains 522 pages in 20 documents in jpg-format alongside transcriptions in Transkribus pageXML. The training set consists of 470 pages; the validation set consists of 52 (10%) automatically selected pages. No base model was used. The model was developed by Franz Xaver Erhard (Leipzig University) and Xiaoying 笑影 (Leipzig University) for the Divergent Discourses project (DFG/AHRC).
DOI: 10.34770/pbja-we49
title: Data from "Melting curves of ice polymorphs in the vicinity of the liquid-liquid critical point"

description: The possible existence of a liquid-liquid critical point in deeply
 supercooled water has been a subject of debate in part due to the
 challenges associated with providing definitive experimental evidence.
 Pioneering work by Mishima and Stanley [Nature 392, 164 (1998) and
 Phys.~Rev.~Lett. 85, 334 (2000)] sought to shed light on this problem by
 studying the melting curves of different ice polymorphs and their
 metastable continuation in the vicinity of the expected location of the
 liquid-liquid transition and its associated critical point. Based on the
 continuous or discontinuous changes in slope of the melting curves,
 Mishima suggested that the liquid-liquid critical point lies between the
 melting curves of ice III and ice V. Here, we explore this conjecture
 using molecular dynamics simulations with a purely-predictive machine
 learning model based on ab initio quantum-mechanical calculations. We
 study the melting curves of ices III, IV, V, VI, and XIII using this model
 and find that the melting lines of all the studied ice polymorphs are
 supercritical and do not intersect the liquid-liquid transition locus. We
 also find a pronounced, yet continuous, change in slope of the melting
 lines upon crossing of the locus of maximum compressibility of the liquid.
 Finally, we analyze critically the literature in light of our findings,
 and conclude that the scenario in which melting curves are supercritical
 is favored by the most recent computational and experimental evidence.
 Thus, although the preponderance of experimental and computational
 evidence is consistent with the existence of a second critical point in
 water, the behavior of the melting lines of ice polymorphs does not
 provide strong evidence in support of this viewpoint, according to our
 calculations.
DOI: 10.15468/dl.5dgywn
title: Occurrence Download

description: A dataset containing 14791 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY 4.0, CC-BY-NC 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Picea pungens Engelm."
 ]
}

 The dataset includes 14791 records from 171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032332-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.4121/85fa13dc-e7a6-4773-8649-c511bfb552f3
title: Dataset underlying the manuscript "Using Dimensionless Numbers to Understand Interfacial Mass Transfer in Parallel Flow in a Microchannel"

description: This dataset is the basis for the forthcoming publication tentatively titled "Using Dimensionless Numbers to Understand Interfacial Mass Transfer in Parallel Flow in a Microchannel" corresponding to a part of Chapter 6 in the dissertation. In this dataset, simulations were conducted to understand the mass transfer involved in parallel flow in a microchannel. All the data corresponds to the images obtained from these simulations.
DOI: 10.4121/85fa13dc-e7a6-4773-8649-c511bfb552f3.v1
title: Dataset underlying the manuscript "Using Dimensionless Numbers to Understand Interfacial Mass Transfer in Parallel Flow in a Microchannel"

description: This dataset is the basis for the forthcoming publication tentatively titled "Using Dimensionless Numbers to Understand Interfacial Mass Transfer in Parallel Flow in a Microchannel" corresponding to a part of Chapter 6 in the dissertation. In this dataset, simulations were conducted to understand the mass transfer involved in parallel flow in a microchannel. All the data corresponds to the images obtained from these simulations.
DOI: 10.15468/dl.qfgsrb
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Adiantum aleuticum (Rupr.) C.A.Paris"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032337-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27011950
title: Data of Test System 1

description: Data for Test System 1
DOI: 10.6084/m9.figshare.27011950.v4
title: Data of Test System 1

description: Data for Test System 1
DOI: 10.6084/m9.figshare.27011950.v3
title: Data of Test System 1

description: Data for Test System 1
DOI: 10.15468/dl.wp6dgf
title: Occurrence Download

description: A dataset containing 4048 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is one of (CC-BY 4.0, CC-BY-NC 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Pinus canariensis C.Sm."
 ]
}

 The dataset includes 4048 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032338-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aew5c3
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chamaecrista caribaea (Northr.) Britton"
 ]
}

 The dataset includes 77 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032340-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13982928
title: Virus multi-Semantic Annotation Dataset

description: In-depth research into the characteristics of high-risk oncogenic viruses is of paramount scientific significance for the early prevention and control of related cancers and the development of effective vaccines. The mechanism of viral carcinogenesis involves numerous risk factors, including viral genomic variations, lifestyle, and environmental factors. Based on literature data on 8 oncogenic viruses, we have created a large-scale, semantically rich corpus of viral carcinogenic factors, including 551,715 abstracts and 5,821,308 entities using natural language processing technology combined with expert knowledge. The dataset includes annotation information for eight viruses: HPV, HIV, EBV, MCV, HCV, HTLV-1, HBV, and KSHV, covering 38 external factors and 5 internal factors.
DOI: 10.5281/zenodo.13982929
title: Virus multi-Semantic Annotation Dataset

description: In-depth research into the characteristics of high-risk oncogenic viruses is of paramount scientific significance for the early prevention and control of related cancers and the development of effective vaccines. The mechanism of viral carcinogenesis involves numerous risk factors, including viral genomic variations, lifestyle, and environmental factors. Based on literature data on 8 oncogenic viruses, we have created a large-scale, semantically rich corpus of viral carcinogenic factors, including 551,715 abstracts and 5,821,308 entities using natural language processing technology combined with expert knowledge. The dataset includes annotation information for eight viruses: HPV, HIV, EBV, MCV, HCV, HTLV-1, HBV, and KSHV, covering 38 external factors and 5 internal factors.
DOI: 10.15468/dl.bk3665
title: Occurrence Download

description: A dataset listing the 4799 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-107.57169 5.21686,-27.83487 5.21686,-27.83487 37.09739,-107.57169 37.09739,-107.57169 5.21686))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Polychaeta"
 ]
}

 The dataset's 4799 records were derived from 270 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032324-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/3314
title: batman2
DOI: 10.15468/dl.pamu5q
title: Occurrence Download

description: A dataset containing 193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Chaetogastra adenophora (Cogn.) P.J.F.Guim. & Michelang., Tibouchina urbanii Cogn.)"
 ]
}

 The dataset includes 193 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032341-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r2xw9q
title: Occurrence Download

description: A dataset containing 3960 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Occurrence evidence)",
 "Geometry POLYGON((64.66926 -30.99273,116.26888 -37.67472,148.31332 -30.99273,155.20544 -11.71702,147.27392 59.66667,76.61128 40.55891,64.66926 45.36653,19.28802 53.89829,0.18026 54.97986,11.3565 39.11682,67.23766 -6.66969,64.66926 -30.99273))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Nelumbo nucifera Gaertn."
 ]
}

 The dataset includes 3960 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032342-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27011989
title: Data of Test System 2

description: Data for Test System 2
DOI: 10.6084/m9.figshare.27011989.v4
title: Data of Test System 2

description: Data for Test System 2
DOI: 10.6084/m9.figshare.27011989.v3
title: Data of Test System 2

description: Data for Test System 2