cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.944344
title: Seawater carbonate chemistry and molecular pathways, physiological function, biochemical responses, and health status of clams and scallops

description: In estuarine ecosystems, bivalves experience large pH fluctuations caused by the anthropogenic elevation of atmospheric CO2 and Cu pollution. This study investigates whether Cu toxicity increases indiscriminately in two bivalve species from different estuarine habitats as a result of elevated Cu bioaccumulation in acidified seawater. This was carried out by evaluating the effects of Cu exposure on two bivalve species (clams and scallops) for 28 d, at a series of gradient pH levels (pH 8.1, 7.8, and 7.6). The results demonstrated an increase in the Cu content in the soft tissues of clams and scallops in acidified seawater. Cu toxicity increased under acidified seawater by affecting the molecular pathways, physiological function, biochemical responses, and health status of clams and scallops. An iTRAQ-based quantitative proteomic analysis showed increased protein turnover, disturbed cytoskeleton and signal transduction pathways, apoptosis, and suppressed energy metabolism pathways in the clams and scallops under joint exposure to ocean acidification and Cu. The integrated biomarker response results suggested that scallops were more sensitive to Cu toxicity and/or ocean acidification than clams. The proteomic results suggested that the increased energy metabolism and suppressed protein turnover rates may contribute to a higher resistivity to ocean acidification in clams than scallops. Overall, this study provides molecular insights into the distinct sensitivities between two bivalve species from different habitats under exposure to ocean acidification and/or Cu. The findings emphasize the aggravating impact of ocean acidification on Cu toxicity in clams and scallops. The results show that ocean acidification and copper pollution may reduce the long-term viability of clams and scallops, and lead to the degradation of estuarine ecosystems.
description: In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2021) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2022-05-13.The species name used in the paper is Chlamys farreri.
DOI: 10.1594/pangaea.933898
title: Early Holocene (c. 11.0 - 9.5 ka BP) trace element data from stalagmite NAH14, north-eastern Yucatan Peninsula

description: This dataset from a speleothem record from the north-eastern Yucatán peninsula (Mexico) provides a high reslution stable isotope and trace elemental record for the early Holocene between 11,040 and 9,520 a BP on up to sub-decadal scale. Line scans of Element/Calcium ratios of the speleothem were measured by laser ablation ICPMS. The chronology is based on 17 U-Th ages (Warken et al., 2021) calculated with the half lives of Cheng et al., 2013. The age-depth model was constructed using the algorithm COPRA (Breitenbach et al., 2012).
DOI: 10.1594/pangaea.942544
title: LA-ICP-MS monazite U-Pb data for the key lithological units in the Chonghuer-Jiadengyu region of the Chinese Altai, NW China (Table S2)
DOI: 10.1594/pangaea.203907
title: Magnesium/calcium ratio of the foraminifera Oridorsalis umbonatus in surface samples, GeoB8449-1
DOI: 10.6084/m9.figshare.28862655.v1
title: Additional file 1 of The intersection and developmental trajectory of morning cortisol and testosterone in autistic and neurotypical youth

description: Supplementary Material 1: Additional file 1: Supplemental Tables: Table S1: Aim 2 Mixed Effects ANOVA Table of Cortisol and Testosterone on CBCL Social Problems at Last Year of Data Collection; Table S2: Aims 2 and 3 Cortisol and Testosterone Mediation Effects on CBCL Social Problems and Aggressive Behavior at Last Year of Data Collection; Table S3: Aim 2 Mixed Effects ANOVA Table of Cortisol and Testosterone on CBCL Social Problems with GB Stage; Table S4: Aim 2 Mixed Effects ANOVA Table of Cortisol and Testosterone on CBCL Social Problems at Last Year of Data Collection with GB Stage; Table S5: Aims 2 and 3 Cortisol and Testosterone Mediation Effects on CBCL Social Problems and Aggressive Behavior at Last Year of Data Collection with GB Stage; Table S6: Aim 2 Mixed Effects ANOVA Table of Cortisol and Testosterone on CBCL Aggressive Behaviors at Last Year of Data Collection; Table S7: Aim 2 Mixed Effects ANOVA Table of Cortisol and Testosterone on CBCL Aggressive Behaviors with GB Stage; Table S8: Aim 2 Mixed Effects ANOVA Table of Cortisol and Testosterone on CBCL Aggressive Behaviors at Last Year of Data Collection with GB Stage; Table S9: Descriptive statistics for cortisol and testosterone at each year by diagnosis and sex; Table S10: Longitudinal ANOVA tables for the CBCL Social Problems with and without diagnosis; Table S11: Bivariate Correlations of Cortisol and Testosterone with CBCL by Subgroup and Time Point.
DOI: 10.1594/pangaea.900768
title: (Supplemental Materials, Table 6) Additional trace elements compositions of fresh glass samples recovered during AT26-09 and AT26-24 from Dorado Outcrop
DOI: 10.6084/m9.figshare.28862655
title: Additional file 1 of The intersection and developmental trajectory of morning cortisol and testosterone in autistic and neurotypical youth

description: Supplementary Material 1: Additional file 1: Supplemental Tables: Table S1: Aim 2 Mixed Effects ANOVA Table of Cortisol and Testosterone on CBCL Social Problems at Last Year of Data Collection; Table S2: Aims 2 and 3 Cortisol and Testosterone Mediation Effects on CBCL Social Problems and Aggressive Behavior at Last Year of Data Collection; Table S3: Aim 2 Mixed Effects ANOVA Table of Cortisol and Testosterone on CBCL Social Problems with GB Stage; Table S4: Aim 2 Mixed Effects ANOVA Table of Cortisol and Testosterone on CBCL Social Problems at Last Year of Data Collection with GB Stage; Table S5: Aims 2 and 3 Cortisol and Testosterone Mediation Effects on CBCL Social Problems and Aggressive Behavior at Last Year of Data Collection with GB Stage; Table S6: Aim 2 Mixed Effects ANOVA Table of Cortisol and Testosterone on CBCL Aggressive Behaviors at Last Year of Data Collection; Table S7: Aim 2 Mixed Effects ANOVA Table of Cortisol and Testosterone on CBCL Aggressive Behaviors with GB Stage; Table S8: Aim 2 Mixed Effects ANOVA Table of Cortisol and Testosterone on CBCL Aggressive Behaviors at Last Year of Data Collection with GB Stage; Table S9: Descriptive statistics for cortisol and testosterone at each year by diagnosis and sex; Table S10: Longitudinal ANOVA tables for the CBCL Social Problems with and without diagnosis; Table S11: Bivariate Correlations of Cortisol and Testosterone with CBCL by Subgroup and Time Point.
DOI: 10.15468/dl.k23vcj
title: Occurrence Download

description: A dataset containing 7940348 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Dipsacales"
 ]
}

 The dataset includes 7940348 records from 6756 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000865-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc110820157
title: Persepolis Fortification Elamite Tablet 2267.101, Fort 2267.101

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2267.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge. ❧ [Physical Object Note:] Left side of tablet missing.
DOI: 10.5281/zenodo.17585608
title: Augments of local HST galaxy images at different noise and resolution levels

description: Description

The dataset contains 189 local galaxies from the RNGC/IC catalog that are imaged by the Hubble Space Telescope in the F814W filter. For each galaxy, we created a series of augments by degrading the spatial resolution of the image and adding noise to decrease the signal-to-noise, or the surface brightness limit. This produced a dataset of ~60k images at varying noise and resolution levels. We used these images to investigate the dependence of common structural measurements on resolution and noise. We plan to use these further to train a deep learning network that is unbiased to imaging effects. The dataset and the project are described in detail in Sazonova et al. (2025). 

Please reach out to liza.sazonova@uwaterloo.ca if you would like to learn more about the dataset, and please reference our paper if you wish to use it in your projects. 

Contents




Filename
Description


data.tar.zst


A compressed archive containing all the augments. For each galaxy, we generate images at resolutions of 25 to 2000 parsecs/px, and surface brightness limits ranging from 20 to 26 mag/arcsec2. Each galaxy then has up to 450 augments.

This is an archive containing all augments for all galaxies, i.e. ~60,000 images. Th file contains 190 tar.zst files for each galaxy. Each of these contains ~450 fits.fz compressed files. The total size of a decompressed archive is ~350 GB.



segmaps.json.gz
Segmentation maps and masks, outlining each source and any foreground/background contaminants, for each augmented image. The segmentation maps are saved in the RLE format. Please consult our package for help in converting these to boolean masks.


sample.csv
The list of 190 galaxies in this study and their properties, such as coordinates, radii, distances, etc.


morphology.csv
Morphological measurements obtained with statmorph-lsst and Galfit for each augmented image.
DOI: 10.5281/zenodo.17585609
title: Augments of local HST galaxy images at different noise and resolution levels

description: Description

The dataset contains 189 local galaxies from the RNGC/IC catalog that are imaged by the Hubble Space Telescope in the F814W filter. For each galaxy, we created a series of augments by degrading the spatial resolution of the image and adding noise to decrease the signal-to-noise, or the surface brightness limit. This produced a dataset of ~60k images at varying noise and resolution levels. We used these images to investigate the dependence of common structural measurements on resolution and noise. We plan to use these further to train a deep learning network that is unbiased to imaging effects. The dataset and the project are described in detail in Sazonova et al. (2025). 

Please reach out to liza.sazonova@uwaterloo.ca if you would like to learn more about the dataset, and please reference our paper if you wish to use it in your projects. 

Contents




Filename
Description


data.tar.zst


A compressed archive containing all the augments. For each galaxy, we generate images at resolutions of 25 to 2000 parsecs/px, and surface brightness limits ranging from 20 to 26 mag/arcsec2. Each galaxy then has up to 450 augments.

This is an archive containing all augments for all galaxies, i.e. ~60,000 images. Th file contains 190 tar.zst files for each galaxy. Each of these contains ~450 fits.fz compressed files. The total size of a decompressed archive is ~350 GB.



segmaps.json.gz
Segmentation maps and masks, outlining each source and any foreground/background contaminants, for each augmented image. The segmentation maps are saved in the RLE format. Please consult our package for help in converting these to boolean masks.


sample.csv
The list of 190 galaxies in this study and their properties, such as coordinates, radii, distances, etc.


morphology.csv
Morphological measurements obtained with statmorph-lsst and Galfit for each augmented image.
DOI: 10.25549/inscriptifact-ouc110820302
title: Persepolis Fortification Elamite Tablet 2272.101, Fort 2272.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2272.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper left, upper right and lower right corners broken off. Damage on obverse, reverse.
DOI: 10.25549/inscriptifact-ouc110820271
title: Persepolis Fortification Elamite Tablet 2272.101, Fort 2272.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2272.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper left, upper right and lower right corners broken off. Damage on obverse, reverse.
DOI: 10.25549/inscriptifact-ouc110820191
title: Persepolis Fortification Elamite Tablet 2272.101, Fort 2272.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2272.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper left, upper right and lower right corners broken off. Damage on obverse, reverse.
DOI: 10.25549/inscriptifact-ouc110820192
title: Persepolis Fortification Elamite Tablet 2272.101, Fort 2272.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2272.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper left, upper right and lower right corners broken off. Damage on obverse, reverse.
DOI: 10.25549/inscriptifact-ouc110820115
title: Persepolis Fortification Elamite Tablet 2267.101, Fort 2267.101

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2267.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. Seal impression on right edge. ❧ [Physical Object Note:] Left side of tablet missing.
DOI: 10.25549/inscriptifact-ouc110820070
title: Persepolis Fortification Elamite Tablet 2272.101, Fort 2272.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 2272.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper left, upper right and lower right corners broken off. Damage on obverse, reverse.
DOI: 10.5067/wna-backtraj/1994-2021-merge
title: Western North American FLEXPART Back Trajectory 1994-2021 Merge Data
DOI: 10.15468/dl.qu2bzv
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Clemson University Herbarium",
 "Country is Croatia"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006858-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fuuhps
title: Occurrence Download

description: A dataset containing 1445 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Taxus L."
 ]
}

 The dataset includes 1445 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006860-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ccdxkq
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Saxifraga nana Engl."
 ]
}

 The dataset includes 7 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006861-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2x75qr
title: Occurrence Download

description: A dataset containing 539 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Inventario de fauna vertebrada terrestre de la Reserva Forestal Protectora Nacional (RFPN) del río Nare"
 ]
}

 The dataset includes 539 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008924-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yas6ev
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Peru",
 "OccurrenceStatus is Present",
 "TaxonKey is Dasypus pilosus"
 ]
}

 The dataset includes 14 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020618-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5zjyku
title: Occurrence Download

description: A dataset containing 145 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((-79.498 0.429185, -79.568265 0.423617, -79.63679999999999 0.407053, -79.701916 0.379899, -79.762011 0.342824, -79.81560500000001 0.296742, -79.861378 0.242786, -79.89820400000001 0.182286, -79.925175 0.116732, -79.94162799999999 0.047737, -79.947158 -0.022999, -79.94162799999999 -0.093736, -79.92517599999999 -0.162731, -79.898205 -0.228285, -79.861379 -0.288785, -79.815606 -0.342741, -79.762012 -0.388824, -79.70191699999999 -0.425898, -79.63679999999999 -0.453053, -79.568265 -0.469617, -79.498 -0.475185, -79.427735 -0.469617, -79.3592 -0.453053, -79.294083 -0.425898, -79.233988 -0.388824, -79.18039400000001 -0.342741, -79.134621 -0.288785, -79.097795 -0.228285, -79.070824 -0.162731, -79.054372 -0.093736, -79.04884199999999 -0.022999, -79.054372 0.047737, -79.070825 0.116732, -79.097796 0.182286, -79.13462199999999 0.242786, -79.180395 0.296742, -79.23398899999999 0.342824, -79.294084 0.379899, -79.3592 0.407053, -79.427735 0.423617, -79.498 0.429185))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 145 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020617-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.caest6
title: Occurrence Download

description: A dataset containing 2713 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Gypaetus barbatus"
 ]
}

 The dataset includes 2713 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020620-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6u57xd
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((100.21 8.504091000000001, 100.138962 8.498518000000001, 100.069679 8.48194, 100.003863 8.454764000000001, 99.943138 8.417662, 99.88900099999999 8.371549999999999, 99.842788 8.317567, 99.805634 8.257045, 99.778452 8.191477000000001, 99.76190699999999 8.122477999999999, 99.7564 8.051748999999999, 99.762062 7.981033, 99.77874799999999 7.912069, 99.80604099999999 7.846555, 99.843266 7.786101, 99.889504 7.732194, 99.94361600000001 7.686159, 100.00427 7.649125, 100.069975 7.622004, 100.139118 7.60546, 100.21 7.599899, 100.280882 7.60546, 100.350025 7.622004, 100.41573 7.649125, 100.476384 7.686159, 100.530496 7.732194, 100.576734 7.786101, 100.613959 7.846555, 100.641252 7.912069, 100.657938 7.981033, 100.6636 8.051748999999999, 100.658093 8.122477999999999, 100.641548 8.191477000000001, 100.614366 8.257045, 100.577212 8.317567, 100.530999 8.371549999999999, 100.476862 8.417662, 100.416137 8.454764000000001, 100.350321 8.48194, 100.281038 8.498518000000001, 100.21 8.504091000000001))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 26 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020623-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j8kvha
title: Occurrence Download

description: A dataset containing 79 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cladium mariscus, Cladium mariscus, Cladium mariscus, Cladium germanicum)",
 "Geometry POLYGON ((8.643 46.99, 14.1 46.92, 14.43 50.75, 8.534 50.83, 8.643 46.99))",
 "Year is greater than or equal to 2010",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 50",
 "BasisOfRecord is one of (Observation, Human Observation, Machine Observation, Material sample)"
 ]
}

 The dataset includes 79 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020624-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.