cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25934/pr00008765
title: Understanding individual differences in response to roflumilast in schizophrenia

description: Schizophrenia is a disorder that affects approximately 24 million people worldwide (approximately 0.30% of the population), with age of onset typically in late adolescence and early adulthood. It is associated with considerable functional impairment and early mortality compared to the rest of the population. There are severe, prominent impairments with cognition (i.e. the mechanics of thinking) in this population, which include problems with attention, memory and the ability to make decisions.

One drug mechanism that may help cognition in schizophrenia is through the inhibition of the phosphodiesterase 4 enzyme (PDE4). This enzyme breaks down molecules in nerve cells that signal when the nerve cell has gotten important information, and are as a consequence important players in memory formation. By inhibiting the breakdown of these molecules, PDE4 inhibitors can enhance cognition. One such inhibitor is roflumilast, which was examined in this exploratory study in a short-term treatment of patients with schizophrenia.

The prior investigation of roflumilast on schizophrenia examined whether roflumilast attenuated cognitive impairment using a three-period crossover design in which patients were randomly assigned to receive roflumilast (100 µg or 250 µg) and placebo in a pre-specified order. The study consisted of three 8-day treatment periods (100 µg or 250 µg of roflumilast, or placebo) separated by a period of at least 14 days. The proposed research is exploratory and seeks to expand on their findings by exploring the impact of patient attributes (e.g., baseline cognitive performance, baseline electrical responses of the brain to sensory stimuli) prior to the initiation of treatment on the prediction of cognitive impact with roflumilast. This research is intended to be hypothesis-generating, in that findings may inform hypotheses for future studies.
DOI: 10.17028/rd.lboro.23790747
title: Supplementary information files for Investigation of solution-based synthesis of non-toxic perovskite materials using Mg, Ca, Mn, Fe, Cu, and Zn as the B-site cation for photovoltaic applications

description: Supplementary files for article Investigation of solution-based synthesis of non-toxic perovskite materials using Mg, Ca, Mn, Fe, Cu, and Zn as the B-site cation for photovoltaic applications High-efficiency perovskite solar cells are reliant on lead-based materials, which causes toxicity issues for large-scale implementation. Current alternatives can contain similarly environmentally dangerous chemicals such as tin halide compounds. Computational studies have suggested a large array of different potential B-site metal cations that could produce suitable perovskite materials. In this work, simple, solution synthesis of 24 candidate materials is attempted with a focus on the environmental safety of the starting compounds. Of these 24 materials, 10 formed a new material from XRD characterisation, and 1 of the resulting films produces a material with an observable band-gap in UV/vis. This material, a combination of potassium bromide and copper bromide, failed to produce a solar cell of any notable efficiency. This work demonstrates that completely environmentally benign perovskite materials may require more energy-intensive synthesis such as solid-state methods, removing the benefits of simple, solution processing evident in lead-halide perovskite solar cells.
DOI: 10.17028/rd.lboro.23790747.v1
title: Supplementary information files for Investigation of solution-based synthesis of non-toxic perovskite materials using Mg, Ca, Mn, Fe, Cu, and Zn as the B-site cation for photovoltaic applications

description: Supplementary files for article Investigation of solution-based synthesis of non-toxic perovskite materials using Mg, Ca, Mn, Fe, Cu, and Zn as the B-site cation for photovoltaic applications High-efficiency perovskite solar cells are reliant on lead-based materials, which causes toxicity issues for large-scale implementation. Current alternatives can contain similarly environmentally dangerous chemicals such as tin halide compounds. Computational studies have suggested a large array of different potential B-site metal cations that could produce suitable perovskite materials. In this work, simple, solution synthesis of 24 candidate materials is attempted with a focus on the environmental safety of the starting compounds. Of these 24 materials, 10 formed a new material from XRD characterisation, and 1 of the resulting films produces a material with an observable band-gap in UV/vis. This material, a combination of potassium bromide and copper bromide, failed to produce a solar cell of any notable efficiency. This work demonstrates that completely environmentally benign perovskite materials may require more energy-intensive synthesis such as solid-state methods, removing the benefits of simple, solution processing evident in lead-halide perovskite solar cells.
DOI: 10.21227/hzw9-6q21
title: Supplementary material for the submission "Empirical Validation of a Class of Ray-Based Fading Models"

description: This repository stores the supplementary material associated to the work "Empirical Validation of a Class of Ray-Based Fading Models". That work is related with stocastich channel characterization and empirical validation. Three alternative scenarios are studied: anechoic and reverberation chambers, and indoor environments. Through the generation of linear combinations of different path measurements, a large amount of possible configurations appear for each one. In order to support the content of this work, several animations have been carried out. They are useful for the reader to illustrate some of the affirmations, statements and results that have been presented in the mentioned work.
DOI: 10.5281/zenodo.7930409
title: Data for: Contributions of deep learning to automated numerical modelling of the interaction of electric fields and cartilage tissue based on 3D images

description: Replication data for: Contributions of deep learning to automated numerical modelling of the interaction of electric fields and cartilage tissue based on 3D images
description: This work was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – SFB 1270/1,2 - 299150580.
DOI: 10.5281/zenodo.7930408
title: Data for: Contributions of deep learning to automated numerical modelling of the interaction of electric fields and cartilage tissue based on 3D images

description: Replication data for: Contributions of deep learning to automated numerical modelling of the interaction of electric fields and cartilage tissue based on 3D images
description: This work was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – SFB 1270/1,2 - 299150580.
DOI: 10.5281/zenodo.8188857
title: EEG recordings comprising evoked potentials related to attention to colored laminar stimuli

description: Here we provide EEG (electroencephalogram) data recorded during BCI (brain-computer interface) control. The BCI was intended for the decoding of binary decisions from a series of colored laminar stimuli. The decoding task is to determine to which of the simultaneously presented items the participant shifted his/her attention. By determining the visual field a subject's attention was shifted to, the intended target color can be determined.<br> 14 participants were presented with 144 sequences of ten visual stimuli in which a red and a green surface was simultaneously illuminated in opposite visual hemifields. Participants associated the green stimulus with the word "yes" and the red with the word "no" while responding to the question whether an auditorily presented number was even or not. They communicated their response only by directing their attention to the respective surface, while fixating their visual gaze on a cross in the center of the stimulus device. The online decoded response was presented as feedback auditorily by a female voice saying the words "yes" or "no".
description: Data of single participants can be loaded in Matlab (e.g. load P01.mat) which reveals the structures subject and bciexp. The fields of these structures are described in detail in the file Description.pdf. In short, the EEG data are segmented in trials (each comprising a series of visual stimuli during which participants responded to a question by their spatial covert attention) and are stored in bciexp.data We also provide example scripts in example.zip that show how the data could be analysed using the ERPCCA toolbox: https://gitlab.com/christoph.reichert/erpcca
DOI: 10.5281/zenodo.8188856
title: EEG recordings comprising evoked potentials related to attention to colored laminar stimuli

description: Here we provide EEG (electroencephalogram) data recorded during BCI (brain-computer interface) control. The BCI was intended for the decoding of binary decisions from a series of colored laminar stimuli. The decoding task is to determine to which of the simultaneously presented items the participant shifted his/her attention. By determining the visual field a subject's attention was shifted to, the intended target color can be determined.<br> 14 participants were presented with 144 sequences of ten visual stimuli in which a red and a green surface was simultaneously illuminated in opposite visual hemifields. Participants associated the green stimulus with the word "yes" and the red with the word "no" while responding to the question whether an auditorily presented number was even or not. They communicated their response only by directing their attention to the respective surface, while fixating their visual gaze on a cross in the center of the stimulus device. The online decoded response was presented as feedback auditorily by a female voice saying the words "yes" or "no".
description: Data of single participants can be loaded in Matlab (e.g. load P01.mat) which reveals the structures subject and bciexp. The fields of these structures are described in detail in the file Description.pdf. In short, the EEG data are segmented in trials (each comprising a series of visual stimuli during which participants responded to a question by their spatial covert attention) and are stored in bciexp.data We also provide example scripts in example.zip that show how the data could be analysed using the ERPCCA toolbox: https://gitlab.com/christoph.reichert/erpcca
DOI: 10.6084/m9.figshare.22815770.v1
title: Classification, Challenges, and Automated Approaches to Handle Non-Functional Requirements in ML-Enabled Systems: A Systematic Literature Review

description: This item contains the replication package related to the paper " Classification, Challenges, and Automated Approaches to Handle Non-Functional Requirements in ML-Enabled Systems: A Systematic Literature Review" includes the results of the various step of our study and plots
DOI: 10.20387/bonares-0kxj-bv82
title: Soil pressure, deformation, and changes in soil physical parameters caused by combine harvester wheeling in 2017

description: In recent years, agricultural machinery became steadily larger and heavier. Especially under wet soil conditions, when soil is susceptible to compaction, heavy wheel load field traffic can lead to harmful soil compaction. This data set contains soil data from a wheeling experiment with an agricultural vehicle (2-axle combine harvester with bunker; total weight: 17 t). The experiment was conducted in 2017 on an agricultural test field in Adenstedt (Hildesheim district, Lower Saxony, Germany) during the harvest campaign. The soil type is Stagnic Luvisol derived from Loess and was conventionally tilled with a plough up to a depth of 28 cm. The cultivated crop was winter wheat. For the wheeling experiment, a combine harvester with full bunker volume passed defined plots in the field. In the inner field area, the number of wheel passes were 2 and in the headlands the number of wheel passes were 8. The sampling sites were both located in the inner field area and in the headlands. To investigate changes in soil physical parameters, soil structure, and soil functions caused by combine harvester driving, undisturbed soil cores (100 cm³) were taken before (unwheeled) and after wheeling (wheeled). The unwheeled soil samples were taken in 20, 35, and 50 depth and the wheeled soil samples in 20, 35, and 50 cm depth. In the inner field area, two soil pits were sampled per wheeling variant and in the headlands, one soil pit was sampled per wheeling variant. Additionally, the soil biopores were counted in every one of the three soil depths. A total of 30 undisturbed soil samples were taken per each soil pit, 10 per each soil depth. 5 of the 10 undisturbed sampling rings were used to investigate soil water retention and the other 5 for saturated hydraulic conductivity. The determination of pF values was conducted in the soil laboratory using sand and clay boxes as well as pressure pots according to DIN ISO 11274. Saturated hydraulic conductivity was analyzed using a soil water permeameter (open system) according to ISO / FDIS 17312. The soil parameters total pore volume, air capacity, field capacity, usable field capacity, permanent wilting point, dry bulk density, and current water content during soil sampling were derived from the soil laboratory results.
DOI: 10.5522/04/23749197.v1
title: Enhanced clay formation key in sustaining the Middle Eocene Climatic Optimum

description: Supplementary tables S1-S6 for the paper: <br> Krause, A.J., Sluijs, A., van der Ploeg, R., Lenton, T.M. and Pogge von Strandmann, P.A.E. (2023) Enhanced clay formation key in sustaining the Middle Eocene Climatic Optimum, <em>Nature Geoscience</em>, <strong>Vol TBC</strong>, DOI: 10.1038/s41561-023-01234-y <br> Table S1: Tiepoints for the age models for the study sites Table S2: Data for Site 1263 Table S3: Data for Site U1333 Table S4: Data for Site 959 Table S5: CO<sub>2</sub> and pH data from a previously published study with ages updated Table S6: d<sup>18</sup>O data from a previously published study with ages updated
DOI: 10.6084/m9.figshare.23597415.v1
title: Additional file 7 of Upregulation of dihydropyrimidinase-like 3 (DPYSL3) protein predicts poor prognosis in urothelial carcinoma

description: Additional file 7: Table S6. GO enrichments of negatively associated genes.
DOI: 10.6084/m9.figshare.23597409.v1
title: Additional file 5 of Upregulation of dihydropyrimidinase-like 3 (DPYSL3) protein predicts poor prognosis in urothelial carcinoma

description: Additional file 5: Table S4. The top 500 most significant differentially expressed genes negatively correlated with DPYSL3 expression in bladder cancer.
DOI: 10.6084/m9.figshare.23597406.v1
title: Additional file 4 of Upregulation of dihydropyrimidinase-like 3 (DPYSL3) protein predicts poor prognosis in urothelial carcinoma

description: Additional file 4: Table S3. The top 500 most significant differentially expressed genes positively correlated with DPYSL3 expression in bladder cancer.
DOI: 10.6084/m9.figshare.22243669.v1
title: Reassessing the causal connection between satDNA dynamics and chromosomal evolution in Ctenomys (Rodentia, Ctenomyidae): Unveiling the overlooked importance of the Y chromosome

description: This dataset corresponds to the manuscript: "Reassessing the causal connection between satDNA dynamics and chromosomal evolution in <em>Ctenomys </em>(Rodentia, Ctenomyidae): Unveiling the overlooked importance of the Y chromosome". <br> Items: <strong>Supplementary File 1 (.xlsx)</strong>. Individual and grouped RPCS copy number, indicating locality, sex, and specimen number. Comparisons between males and females (mean, SD, subtraction and relative amount). <br> <strong>Supplementary File 2 (.fas).</strong> Alignment of three partial mtDNA loci: COI (1-693), cytb (694-1772), CR (1773-2178). Separate sequences for each locus are available in Genbank (Accession numbers JX275502-JX275655 and KT818638-KT818684). <br> infile.nex.con. Phylogenetic tree based on cytb, COI and CR partial sequences of the <em>Ctenomys </em>Corrientes group.
DOI: 10.6084/m9.figshare.19161545.v1
title: <em>Luscinia megarhynchos</em> (common nightingale) and <em>Luscinia luscinia</em> (thrush nightingale) GRC assemblies

description: GRC assemblies for the common nightingale (Luscinia megarhynchos) and thrush nightingale (Luscinia luscinia)
DOI: 10.6084/m9.figshare.23654292
title: National conversion risk assessment for Indigenous Peoples’ lands

description: Land conversion from industrial development poses significant threats to Indigenous Peoples’ lands around the world. To describe the situation globally, we conducted a global conversion risk assessment that utilizes published datasets that represent Indigenous Peoples’ lands, their current ecological condition, future industrial development pressures, and underlying vulnerability to conversion. <br> To assess conversion vulnerability, we developed a global composite index comprised of national socio-economic and political indicators called the RRC Index. The RRC Index is comprised of indicators that measure the strength and security of Indigenous Peoples’ rights to their territories and resources (R), their opportunities for representation and engagement in the decisions impacting them (R), and the capital available to support conservation and sustainable development (C). Interpretation of the RRC Index and its sub-components can aid in the identification of vulnerabilities related to the rights and representation of Indigenous Peoples in decisions impacting their territories and resources, and the capital available to support them. Reciprocally, these vulnerabilities can also suggest potential strategies and actions that might be taken to bolster Indigenous Peoples’ voices, leadership, and agency as they face industrial development worldwide. <br> This data table provides country-level summaries of the data used in our conversion risk assessment, including the total area of each country recognized as Indigenous Peoples’ lands; the total area with high industrial development pressures; sector-specific breakdowns for agriculture, mining, oil and gas, renewables, and urbanization; majority drivers of high development pressure; and conversion threat, vulnerability and risk scores, ranks, and categories.
DOI: 10.6084/m9.figshare.23597415
title: Additional file 7 of Upregulation of dihydropyrimidinase-like 3 (DPYSL3) protein predicts poor prognosis in urothelial carcinoma

description: Additional file 7: Table S6. GO enrichments of negatively associated genes.
DOI: 10.6084/m9.figshare.23597412
title: Additional file 6 of Upregulation of dihydropyrimidinase-like 3 (DPYSL3) protein predicts poor prognosis in urothelial carcinoma

description: Additional file 6: Table S5. GO enrichments of positively associated genes.
DOI: 10.6084/m9.figshare.23597409
title: Additional file 5 of Upregulation of dihydropyrimidinase-like 3 (DPYSL3) protein predicts poor prognosis in urothelial carcinoma

description: Additional file 5: Table S4. The top 500 most significant differentially expressed genes negatively correlated with DPYSL3 expression in bladder cancer.
DOI: 10.6084/m9.figshare.22243669
title: Reassessing the causal connection between satDNA dynamics and chromosomal evolution in <em>Ctenomys </em>(Rodentia, Ctenomyidae): Unveiling the overlooked importance of the Y chromosome

description: This dataset corresponds to the manuscript: "Reassessing the causal connection between satDNA dynamics and chromosomal evolution in <em>Ctenomys </em>(Rodentia, Ctenomyidae): Unveiling the overlooked importance of the Y chromosome". <br> Items: <strong>Supplementary File 1 (.xlsx)</strong>. Individual and grouped RPCS copy number, indicating locality, sex, and specimen number. Comparisons between males and females (mean, SD, subtraction and relative amount). <br> <strong>Supplementary File 2 (.fas).</strong> Alignment of three partial mtDNA loci: COI (1-693), cytb (694-1772), CR (1773-2178). Separate sequences for each locus are available in Genbank (Accession numbers JX275502-JX275655 and KT818638-KT818684). <br> infile.nex.con. Phylogenetic tree based on cytb, COI and CR partial sequences of the <em>Ctenomys </em>Corrientes group.
DOI: 10.6084/m9.figshare.22130549
title: Supplemental file 3

description: Speeding genomic island discovery through systematic design of reference database composition, Supplemental file 3
DOI: 10.6084/m9.figshare.22130450
title: Supplemental file 2

description: Speeding genomic island discovery through systematic design of reference database composition, Supplemental File 2
DOI: 10.6084/m9.figshare.22130132
title: Supplemental file 1

description: Speeding genomic island discovery through systematic design of reference database composition, Supplemental file 1
DOI: 10.6084/m9.figshare.19161545
title: <em>Luscinia megarhynchos</em> (common nightingale) and <em>Luscinia luscinia</em> (thrush nightingale) GRC assemblies

description: GRC assemblies for the common nightingale (Luscinia megarhynchos) and thrush nightingale (Luscinia luscinia)
DOI: 10.21227/r9j6-nd62
title: TextRequirements2Models

description: This dataset provides 162 software requirements written in natural language (English), 120 were gathered from businesses and academic institutions, while 42 were extracted from GitHub. The dataset is ready for all text processing such as learning and extracting conceptual models. All researchers and developers in the field of natural text processing, model extraction from software system requirements (text requirements), intelligent systems, automatic software engineering, requirements analysis and many other fields can use this text dataset. If there is any problem or ambiguity and if there is any question, you can communicate with the authors of the article and the producers of this data via email.
DOI: 10.5281/zenodo.8189229
title: Experimental data of a channel bifurcation with mobile-bed without and with vane-fields

description: Experimental data of laboratory experiments of a channel bifurcation: a main and a lateral diversion channel, both with mobile bed, rectangular cross-section, performing a 90º angle between them.<br> Experiments run until the equilibrium bed was reached. 4 experiments:<br> (i) no vanes - NV;<br> (ii) with a vane-field - VF;<br> (iii) with a second vane-field configuration with the alignment of the vanes (angle beta) = 30º - VF30;<br> (iv) with the same vane-field configuration as (iii) but with angle beta = 10º - VF10. Water depth at the downstream end of the main channel is equal to 0.10 m.<br> Width of the main channel = 0.68 m in (i)-(ii), and 0.67 in (iii)-(iv).<br> Width of the diversion channel = 0.26 m in (i)-(ii), and 0.25 in (iii)-(iv).<br> Discharge at the entrance of the main channel = 29 l/s.<br> Discharge ratio per unit width of the channels: 0.5 in (i)-(ii), and 0.2 in (iii)-(iv).<br> Height of the vanes = 0.03 m above the average bed level of the approach flow. Data measured provided for each experiment: <br> (i) profiles along direction x of the water surface levels and the bed topography;<br> (ii) average values and fluctuations of the 3 components of velocities at a dense grid of points (see figures with the plan views of the measured grid). In the vertical direction z, the points are spaced in 0.5 cm or 1 cm.<br> All the data was measured for the equilibrium bed. The velocities were measured with a side-looking Vectrino. Data was despiked (see Goring and Nikora, 2002 DOI 10.1061/(ASCE)0733-9429(2002)128:1(117) ), and points with correlation &lt; 70% or SNR &lt; 15 db were discarded. For further information see: Baltazar, J.; Alves, E.; Bombar, G.; Cardoso, A.H. Effect of a Submerged Vane-Field on the Flow Pattern of a Movable Bed Channel with a 90º Lateral Diversion. Water 2021, 13, 828. https://doi.org/10.3390/w13060828 PhD thesis "Sediment control at lateral water intakes through submerged vane-fields", by Joana Baltazar (Instituto Superior Técnico, Lisbon, Portugal)<br>