cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30360769
title: Additional file 1 of Variables for habitat and vertebrate hosts of Ixodes scapularis are the best ecological predictors of the spatial spread of Lyme disease in the United States (2010–2019)

description: Additional file 1 (Additional file 1: Datafile S1. An Excel spreadsheet file including (a) a description of each explanatory variable, (b) the complete raw data used in the development of this study, (c) the population and case report of each county for the complete study period (obtained from the CDC and US Census Office). The columns of sheets b and c have a numeric indication of the year. Additional file 2: Datafile S2. A script including the development of the model in Python language, running under the umbrella of Orange data mining software (open-access software). To run this script, a basic knowledge of Python language is required. Additional file 3: Table S1. The confusion matrixes of the number of correctly or incorrectly allocated counties regarding the actual cases classes (rows) versus those predicted by the random forest and gradient boosting models (columns); results include the performance metric results for the individually modeled years 2010, 2013, 2016, and 2019. Values listed correspond to the proportion (%) of counties correctly identified by the models with the reported Lyme disease incidence class for each year. ∑ corresponds to the number of counties allocated for each incidence class. Additional file 4: Table S2. Tabular results for the associations between abiotic explanatory variables for landscape, vegetation, and climate with the 1322 US counties’ Lyme disease incidence classes in the complete 2010–2019 series.
DOI: 10.6084/m9.figshare.30360769.v1
title: Additional file 1 of Variables for habitat and vertebrate hosts of Ixodes scapularis are the best ecological predictors of the spatial spread of Lyme disease in the United States (2010–2019)

description: Additional file 1 (Additional file 1: Datafile S1. An Excel spreadsheet file including (a) a description of each explanatory variable, (b) the complete raw data used in the development of this study, (c) the population and case report of each county for the complete study period (obtained from the CDC and US Census Office). The columns of sheets b and c have a numeric indication of the year. Additional file 2: Datafile S2. A script including the development of the model in Python language, running under the umbrella of Orange data mining software (open-access software). To run this script, a basic knowledge of Python language is required. Additional file 3: Table S1. The confusion matrixes of the number of correctly or incorrectly allocated counties regarding the actual cases classes (rows) versus those predicted by the random forest and gradient boosting models (columns); results include the performance metric results for the individually modeled years 2010, 2013, 2016, and 2019. Values listed correspond to the proportion (%) of counties correctly identified by the models with the reported Lyme disease incidence class for each year. ∑ corresponds to the number of counties allocated for each incidence class. Additional file 4: Table S2. Tabular results for the associations between abiotic explanatory variables for landscape, vegetation, and climate with the 1322 US counties’ Lyme disease incidence classes in the complete 2010–2019 series.
DOI: 10.15468/dl.ubjjm5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Falconiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((50 -80,60 -80,60 -70,50 -70,50 -80))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022128-251009101135966/datasets/export for details.
DOI: 10.15468/dl.fhujn3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Falconiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((60 -80,70 -80,70 -70,60 -70,60 -80))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022127-251009101135966/datasets/export for details.
DOI: 10.6084/m9.figshare.30360817
title: Additional file 1 of Temporally integrated multiomics analysis elucidates intricate regulatory mechanisms of ASFV in a wild boar lung-derived clonal cell line

description: Additional file 1. Primers for qPCR. Primers for detecting siRNA knockdown efficiency.
DOI: 10.6084/m9.figshare.30360817.v1
title: Additional file 1 of Temporally integrated multiomics analysis elucidates intricate regulatory mechanisms of ASFV in a wild boar lung-derived clonal cell line

description: Additional file 1. Primers for qPCR. Primers for detecting siRNA knockdown efficiency.
DOI: 10.6084/m9.figshare.30360820
title: Additional file 2 of Temporally integrated multiomics analysis elucidates intricate regulatory mechanisms of ASFV in a wild boar lung-derived clonal cell line

description: Additional file 2. Sequences for RNA interference. SiRNA sequences of candidate targets identified by multiomics analysis.
DOI: 10.6084/m9.figshare.30360820.v1
title: Additional file 2 of Temporally integrated multiomics analysis elucidates intricate regulatory mechanisms of ASFV in a wild boar lung-derived clonal cell line

description: Additional file 2. Sequences for RNA interference. SiRNA sequences of candidate targets identified by multiomics analysis.
DOI: 10.6084/m9.figshare.30360823
title: Additional file 3 of Temporally integrated multiomics analysis elucidates intricate regulatory mechanisms of ASFV in a wild boar lung-derived clonal cell line

description: Additional file 3. DEGs in response to ASFV infection. Temporal changes in the expression of all the genes were altered at 6, 12, and 24 hpi.
DOI: 10.6084/m9.figshare.30360823.v1
title: Additional file 3 of Temporally integrated multiomics analysis elucidates intricate regulatory mechanisms of ASFV in a wild boar lung-derived clonal cell line

description: Additional file 3. DEGs in response to ASFV infection. Temporal changes in the expression of all the genes were altered at 6, 12, and 24 hpi.
DOI: 10.6084/m9.figshare.30360829
title: Additional file 5 of Temporally integrated multiomics analysis elucidates intricate regulatory mechanisms of ASFV in a wild boar lung-derived clonal cell line

description: Additional file 5. DEPs in response to ASFV infection. Temporal changes in the expression of all the proteins were altered at 6, 12, and 24 hpi.
DOI: 10.6084/m9.figshare.30360829.v1
title: Additional file 5 of Temporally integrated multiomics analysis elucidates intricate regulatory mechanisms of ASFV in a wild boar lung-derived clonal cell line

description: Additional file 5. DEPs in response to ASFV infection. Temporal changes in the expression of all the proteins were altered at 6, 12, and 24 hpi.
DOI: 10.6084/m9.figshare.30360832.v1
title: Additional file 6 of Temporally integrated multiomics analysis elucidates intricate regulatory mechanisms of ASFV in a wild boar lung-derived clonal cell line

description: Additional file 6. GO BP enrichment of host DEPs with time series. GO analysis of differentially expressed proteins at 6, 12, and 24 hpi, presenting data from the BP subset.
DOI: 10.6084/m9.figshare.30360832
title: Additional file 6 of Temporally integrated multiomics analysis elucidates intricate regulatory mechanisms of ASFV in a wild boar lung-derived clonal cell line

description: Additional file 6. GO BP enrichment of host DEPs with time series. GO analysis of differentially expressed proteins at 6, 12, and 24 hpi, presenting data from the BP subset.
DOI: 10.6084/m9.figshare.30360835
title: Additional file 7 of Temporally integrated multiomics analysis elucidates intricate regulatory mechanisms of ASFV in a wild boar lung-derived clonal cell line

description: Additional file 7. GO enrichment of DEGs/DEPs at both the transcriptional and protein levels in a time series. GO analyses were performed at 6, 12, and 24 hpi, targeting genes/proteins whose transcript and protein levels significantly differed.
DOI: 10.6084/m9.figshare.30360835.v1
title: Additional file 7 of Temporally integrated multiomics analysis elucidates intricate regulatory mechanisms of ASFV in a wild boar lung-derived clonal cell line

description: Additional file 7. GO enrichment of DEGs/DEPs at both the transcriptional and protein levels in a time series. GO analyses were performed at 6, 12, and 24 hpi, targeting genes/proteins whose transcript and protein levels significantly differed.
DOI: 10.15468/dl.4skz6w
title: Occurrence Download

description: A dataset containing 2886 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Manoao colensoi"
 ]
}

 The dataset includes 2886 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022126-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30360869
title: Additional file 1 of Mapping SET1B chromatin interactions with DamID using DamMapper, a comprehensive Snakemake workflow

description: Additional file 1. Runtimes and CPU usage for SOX9 analysis (Table S1A) and SET1B/HIF-1α analysis (Table S1B) DamMapper rules.
DOI: 10.6084/m9.figshare.30360869.v1
title: Additional file 1 of Mapping SET1B chromatin interactions with DamID using DamMapper, a comprehensive Snakemake workflow

description: Additional file 1. Runtimes and CPU usage for SOX9 analysis (Table S1A) and SET1B/HIF-1α analysis (Table S1B) DamMapper rules.
DOI: 10.15468/dl.gzyy9f
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Spiranthes spiralis",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 129 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022130-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30360907
title: Additional file 1 of CLE14 peptide delays broccoli senescence by regulating chlorophyll metabolism and reactive oxygen species homeostasis

description: Supplementary Material 1. Table S1 Primers used in this study. Table S2 Transcript levels of mediumpurple module genes in broccoli treated with CLE14 and the control. Table S3 Gene Ontology analysis of genes in the mediumpurple module. Table S4 The differentially expressed genes between control and CLE14-treated broccoli within 0 to 7 d. Table S5 Genes with inconsistent expression patterns between control and CLE14-treated broccoli within 0 to 7 d. Table S6 KEGG pathways of 2384 CLE14-dependent senescence-induced genes.
DOI: 10.6084/m9.figshare.30360907.v1
title: Additional file 1 of CLE14 peptide delays broccoli senescence by regulating chlorophyll metabolism and reactive oxygen species homeostasis

description: Supplementary Material 1. Table S1 Primers used in this study. Table S2 Transcript levels of mediumpurple module genes in broccoli treated with CLE14 and the control. Table S3 Gene Ontology analysis of genes in the mediumpurple module. Table S4 The differentially expressed genes between control and CLE14-treated broccoli within 0 to 7 d. Table S5 Genes with inconsistent expression patterns between control and CLE14-treated broccoli within 0 to 7 d. Table S6 KEGG pathways of 2384 CLE14-dependent senescence-induced genes.
DOI: 10.6084/m9.figshare.30360913
title: Additional file 1 of The burden of endometriosis on quality of life in Danish women: an analysis of the Danish Blood Donor Study

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.30360913.v1
title: Additional file 1 of The burden of endometriosis on quality of life in Danish women: an analysis of the Danish Blood Donor Study

description: Supplementary Material 1
DOI: 10.5281/zenodo.17355045
title: The phylogenetic analysis files of Tuber chuxiongense
DOI: 10.5281/zenodo.17355046
title: The phylogenetic analysis files of Tuber chuxiongense
DOI: 10.6084/m9.figshare.30360949
title: Additional file 3 of Depression with risks for spontaneous abortion: a meta-analysis

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.30360949.v1
title: Additional file 3 of Depression with risks for spontaneous abortion: a meta-analysis

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.30360956
title: Additional file 2 of Thyroid hormone receptor beta signaling is a targetable driver of prostate cancer growth

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30360956.v1
title: Additional file 2 of Thyroid hormone receptor beta signaling is a targetable driver of prostate cancer growth

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30360955
title: Additional file 1 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30360955.v1
title: Additional file 1 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30360958
title: Additional file 2 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30360958.v1
title: Additional file 2 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30360961
title: Additional file 3 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30360961.v1
title: Additional file 3 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30360964
title: Additional file 4 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.30360964.v1
title: Additional file 4 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.30360967
title: Additional file 5 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 5.
DOI: 10.6084/m9.figshare.30360967.v1
title: Additional file 5 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 5.
DOI: 10.6084/m9.figshare.30360970
title: Additional file 6 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 6.
DOI: 10.6084/m9.figshare.30360970.v1
title: Additional file 6 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 6.
DOI: 10.6084/m9.figshare.30360973
title: Additional file 7 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 7.
DOI: 10.6084/m9.figshare.30360973.v1
title: Additional file 7 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 7.
DOI: 10.6084/m9.figshare.30360976
title: Additional file 8 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 8.
DOI: 10.6084/m9.figshare.30360976.v1
title: Additional file 8 of Thyroid disorders and pregnancy loss: a bidirectional mendelian randomization exploration

description: Supplementary Material 8.
DOI: 10.15468/dl.sf2fkn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Falconiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((140 -70,150 -70,150 -60,140 -60,140 -70))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022131-251009101135966/datasets/export for details.
DOI: 10.15468/dl.g3sm92
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Apodiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((60 0,70 0,70 10,60 10,60 0))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022132-251009101135966/datasets/export for details.
DOI: 10.6084/m9.figshare.30361015
title: Additional file 1 of Long-term molecular surveillance of Cryptosporidium and Giardia in wildlife in protected drinking water catchments

description: Supplementary material 1. Table S1. Summary of samples positive for Cryptosporidium and Giardia collected from Melbourne’s drinking water catchments from 2015 to 2024. Table S2. Numbers of faecal samples and Cryptosporidium test-positive samples from animals in Melbourne’s drinking water catchment system – by host – from 2009 to 2024
DOI: 10.6084/m9.figshare.30361015.v1
title: Additional file 1 of Long-term molecular surveillance of Cryptosporidium and Giardia in wildlife in protected drinking water catchments

description: Supplementary material 1. Table S1. Summary of samples positive for Cryptosporidium and Giardia collected from Melbourne’s drinking water catchments from 2015 to 2024. Table S2. Numbers of faecal samples and Cryptosporidium test-positive samples from animals in Melbourne’s drinking water catchment system – by host – from 2009 to 2024
DOI: 10.5281/zenodo.17355186
title: DEGs related with myosin genes in WT and miR499
DOI: 10.5281/zenodo.17355187
title: DEGs related with myosin genes in WT and miR499
DOI: 10.15468/dl.fvzt5v
title: Occurrence Download

description: A dataset containing 46288 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Apodiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((70 0,80 0,80 10,70 10,70 0))"
 ]
}

 The dataset includes 46288 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022133-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30361024
title: Additional file 1 of Ecological factors that drive microbial communities in culturally diverse fermented foods

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30361024.v1
title: Additional file 1 of Ecological factors that drive microbial communities in culturally diverse fermented foods

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.30361027
title: Additional file 2 of Ecological factors that drive microbial communities in culturally diverse fermented foods

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30361027.v1
title: Additional file 2 of Ecological factors that drive microbial communities in culturally diverse fermented foods

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30361049
title: Additional file 4 of Experimental validation of RNA interference technologies for improved control of barber’s pole worm

description: Additional file 4: Primer sets used in this study.
DOI: 10.6084/m9.figshare.30361049.v1
title: Additional file 4 of Experimental validation of RNA interference technologies for improved control of barber’s pole worm

description: Additional file 4: Primer sets used in this study.
DOI: 10.6084/m9.figshare.30361052
title: Additional file 5 of Experimental validation of RNA interference technologies for improved control of barber’s pole worm

description: Additional file 5: Curated nomenclature of cyp genes in Haemonchus contortus.
DOI: 10.6084/m9.figshare.30361052.v1
title: Additional file 5 of Experimental validation of RNA interference technologies for improved control of barber’s pole worm

description: Additional file 5: Curated nomenclature of cyp genes in Haemonchus contortus.
DOI: 10.6084/m9.figshare.30361030
title: Additional file 3 of Ecological factors that drive microbial communities in culturally diverse fermented foods

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30361030.v1
title: Additional file 3 of Ecological factors that drive microbial communities in culturally diverse fermented foods

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.30361033
title: Additional file 4 of Ecological factors that drive microbial communities in culturally diverse fermented foods

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.30361033.v1
title: Additional file 4 of Ecological factors that drive microbial communities in culturally diverse fermented foods

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.30361055
title: Additional file 6 of Experimental validation of RNA interference technologies for improved control of barber’s pole worm

description: Additional file 6: Integrated prediction of cytochrome P450s in major parasitic nematodes.
DOI: 10.6084/m9.figshare.30361055.v1
title: Additional file 6 of Experimental validation of RNA interference technologies for improved control of barber’s pole worm

description: Additional file 6: Integrated prediction of cytochrome P450s in major parasitic nematodes.
DOI: 10.6084/m9.figshare.30361061
title: Additional file 2 of Seed shattering in common buckwheat (Fagopyrum esculentum): insights from RNA-seq and morphological analysis

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30361061.v1
title: Additional file 2 of Seed shattering in common buckwheat (Fagopyrum esculentum): insights from RNA-seq and morphological analysis

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.30361085
title: Additional file 3 of Effects of Intensity and Fatigue on the Kinetics and Kinematics of the Barbell Squat, Bench Press, and Deadlift in Experienced Lifters: A Systematic Review

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.30361085.v1
title: Additional file 3 of Effects of Intensity and Fatigue on the Kinetics and Kinematics of the Barbell Squat, Bench Press, and Deadlift in Experienced Lifters: A Systematic Review

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.30361088
title: Additional file 4 of Effects of Intensity and Fatigue on the Kinetics and Kinematics of the Barbell Squat, Bench Press, and Deadlift in Experienced Lifters: A Systematic Review

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.30361088.v1
title: Additional file 4 of Effects of Intensity and Fatigue on the Kinetics and Kinematics of the Barbell Squat, Bench Press, and Deadlift in Experienced Lifters: A Systematic Review

description: Supplementary Material 4