cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21359714
title: Diagnostic and prognostic value of the AST/ALT ratio in patients with sepsis and septic shock

description: The study investigates the diagnostic and prognostic value of the aspartate aminotransferase (AST) to alanine aminotransferase (ALT) ratio in patients with sepsis and septic shock. Limited data regarding the prognostic value of the AST/ALT ratio in patients suffering from sepsis or septic shock is available. Consecutive patients with sepsis and septic shock from 2019 to 2021 were included monocentrically. Blood samples were retrieved from day of disease onset (day 1), day 2, 3, 5 and 7. First, the diagnostic value of the AST/ALT ratio was tested for septic shock compared to sepsis. Second, the prognostic value of the AST/ALT ratio was tested for 30-d all-cause mortality. Statistical analyses included univariable <i>t</i>-test, Spearman’s correlation, C-statistics, Kaplan–Meier analyses, as well as multivariable mixed analysis of variance (ANOVA), Cox proportional regression analyses and propensity score matching. A total of 289 patients were included, of which 55% had sepsis and 45% septic shock. The overall rate of all-cause mortality at 30 d was 53%. With an area under the curve (AUC) of 0.651 on day 1 and 0.794 on day 7, the AST/ALT ratio revealed moderate but better diagnostic discrimination of septic shock compared to bilirubin. Furthermore, the AST/ALT ratio was able to discriminate 30-d all-cause mortality (AUC = 0.624; 95% CI 0.559 − 0.689; <i>p</i> = 0.001). Patients with an AST/ALT ratio above the median (&gt;1.8) had higher rates of 30-d all-cause mortality compared to lower values (mortality rate 63 <i>vs</i>. 43%; log-rank <i>p</i> = 0.001), even after multivariable adjustment (HR = 1.703; 95% CI 1.182 − 2.453; <i>p</i> = 0.004) and propensity score matching. The AST/ALT was a reliable diagnostic tool for the diagnosis of septic shock as well as a reliable tool to predict 30-d all-cause mortality in patients suffering from sepsis and septic shock.
DOI: 10.6084/m9.figshare.21359714.v1
title: Diagnostic and prognostic value of the AST/ALT ratio in patients with sepsis and septic shock

description: The study investigates the diagnostic and prognostic value of the aspartate aminotransferase (AST) to alanine aminotransferase (ALT) ratio in patients with sepsis and septic shock. Limited data regarding the prognostic value of the AST/ALT ratio in patients suffering from sepsis or septic shock is available. Consecutive patients with sepsis and septic shock from 2019 to 2021 were included monocentrically. Blood samples were retrieved from day of disease onset (day 1), day 2, 3, 5 and 7. First, the diagnostic value of the AST/ALT ratio was tested for septic shock compared to sepsis. Second, the prognostic value of the AST/ALT ratio was tested for 30-d all-cause mortality. Statistical analyses included univariable <i>t</i>-test, Spearman’s correlation, C-statistics, Kaplan–Meier analyses, as well as multivariable mixed analysis of variance (ANOVA), Cox proportional regression analyses and propensity score matching. A total of 289 patients were included, of which 55% had sepsis and 45% septic shock. The overall rate of all-cause mortality at 30 d was 53%. With an area under the curve (AUC) of 0.651 on day 1 and 0.794 on day 7, the AST/ALT ratio revealed moderate but better diagnostic discrimination of septic shock compared to bilirubin. Furthermore, the AST/ALT ratio was able to discriminate 30-d all-cause mortality (AUC = 0.624; 95% CI 0.559 − 0.689; <i>p</i> = 0.001). Patients with an AST/ALT ratio above the median (&gt;1.8) had higher rates of 30-d all-cause mortality compared to lower values (mortality rate 63 <i>vs</i>. 43%; log-rank <i>p</i> = 0.001), even after multivariable adjustment (HR = 1.703; 95% CI 1.182 − 2.453; <i>p</i> = 0.004) and propensity score matching. The AST/ALT was a reliable diagnostic tool for the diagnosis of septic shock as well as a reliable tool to predict 30-d all-cause mortality in patients suffering from sepsis and septic shock.
DOI: 10.5281/zenodo.7648605
title: Southeast Atlantic nitrate isotope data from winter 2017

description: These data are a compilation of nitrogen (d15N) and oxygen (d18O) isotope measurements of nitrate from 0 to 1000m, from across the southeast section of the SAMBA transect (34.5°S, spanning 0 - 17.8°E). Samples were collected on board the R/V S.A. Agulhas II between 17 - 27 July 2017 (austral winter) using a Niskin bottle rosette and include samples taken from within an Agulhas Ring. The data help characterize the isotopic composition of southeast Atlantic water masses, and are useful in providing an overview of the dynamics of nitrogen cycling in the region.
description: This dataset was collected as part of the PhD project, 'Nitrogen cycling in the subtropical southeast Atlantic and southwest Indian Oceans as recorded by the nitrogen isotopes of modern planktic foraminifera' and funded through grants NRF-129320 and NRF-116142. Cite (as of February 2023): Granger, R., Smart, S.M., Foreman, A., Auderset, A., Campbell, E.C., Marshall, T.A., Haug, G.H., D.M. Sigman, Martínez-García, A., Fawcett., S.E. (In prep) 'Tracking Agulhas leakage in the South Atlantic using modern planktic foraminifera nitrogen isotopes.'
DOI: 10.35078/zirqkb
title: Replication Data for: Ficha epidemiológica de localidade: Distrito: Pirapora | Município: Buritis

description: Levantamento Triatomínico com operações de campo ocorridas em Minas Gerais pela Superintendência de Campanhas de Saúde Pública (SUCAM) e FUNASA (Fundação Nacional de Saúde), no período de 1979 a 1999, objetivando a busca da presença de vetores da doença de Chagas ou de vestígios dessa presença. A partir dela são orientadas as operações com inseticida (pt) Triatomine survey with field operations carried out in Minas Gerais by the Public Health Campaigns Superintendence (SUCAM) and FUNASA (National Health Foundation), from 1979 to 1999, aiming to search for the presence of Chagas disease vectors or traces of that presence. From it, operations with insecticide are guided (en) Encuesta de triatominos con operaciones de campo realizada en Minas Gerais por la Superintendencia de Campañas de Salud Pública (SUCAM) y FUNASA (Fundación Nacional de Salud), de 1979 a 1999, con el objetivo de buscar la presencia de vectores de la enfermedad de Chagas o rastros de esa presencia. Desde ella se orientan las operaciones con insecticida (es)
DOI: 10.6073/pasta/b9ffef60518d362a2b892d9471dba5ba
title: Aboveground biomass from control plots in a Spartina patens-dominated salt marsh at Law's Point, Rowley River, Plum Island Ecosystem LTER, MA.

description: Aboveground biomass is determined destructively during the growing season at a Spartina patens-dominated salt marsh on the Rowley River within the Plum Island Ecosystem (PIE) LTER site.
DOI: 10.6084/m9.figshare.21756329
title: T6SS

description: Automated analysis of type 6 secretion system battles with FAST. Contains data of <em>P. aeruginosa</em> fighting with either WT <em>V. cholerae </em>(WT_VC_1 and WT_VC_2) or a knock-out with an inactivated T6SS (KO_VC_1 and KO_VC_2). As well as the usual track data, segmentations and cell features extracted by FAST, this dataset includes some scripts to take advantage of some of FAST's more advanced capabilities: doubleFAST_Script indicates how batch processing can be used to process all four datasets at once. postProcessing_Script shows how the post-processing toolbox can be used to perform population assignment (species assignment) and event detection (detection of T6SS firing events) automatically. Within each of the sub-directories (KO_VC_1 etc.), the CellFeatures and CircleFitByPratt functions show how custom feature extraction can be scripted to extract cell curvature measurements. Original datasets are taken from the supplementary information files of 'The evolution of tit-for-tat in bacteria via the type VI secretion system', licensed under the Creative Commons Attribution 4.0 International License.
DOI: 10.5281/zenodo.7540705
title: RuR Coordinate

description: FC, MLCT, LLCT, ILCTand interpolated coordinates of five Ru(II)R complexes.
DOI: 10.5281/zenodo.7540706
title: Coordinate

description: FC, MLCT, LLCT and interpolated coordinates of five Ru(II) complexes.
DOI: 10.5281/zenodo.7705217
title: RuR Coordinate

description: FC, MLCT, LLCT, ILCTand interpolated coordinates of five Ru(II)R complexes.
DOI: 10.34740/kaggle/ds/2975328
title: AdultoMayor_27_fc
DOI: 10.6084/m9.figshare.22227295
title: CrudeOilTrain-2008-2012-Flickr.csv

description: Locations of crude oil train pictures downloaded from Flickr website (2008-2011 in csv format and 2012 to 2022 in shapefile format).
DOI: 10.6084/m9.figshare.22227295.v1
title: CrudeOilTrain-2008-2012-Flickr.csv

description: Locations of crude oil train pictures downloaded from Flickr website (2008-2011 in csv format and 2012 to 2022 in shapefile format).
DOI: 10.6084/m9.figshare.22189204.v1
title: Supplementary Material for: Bilateral serous detachments with Roth spots after COVID-19 vaccination: a case report

description: With the rise of novel (types) of vaccines during the pandemic, new side-effects are encountered. The aim of this paper is to describe an atypical case of bilateral serous detachments with Roth spots after COVID-19 vaccination using an mRNA vaccine. A healthy, 38-year-old male presented with a central scotoma and metamorphopsia in his left eye, four days after his second COVID-19 booster shot. Bilateral serous detachments were seen, with one area showing Roth spots. Patient's symptoms resolved spontaneously without any treatment. Although serous detachment after COVID-19 vaccination has been described in the context of other diseases, such as Vogt-Koyanagi-Harada disease, Central Serous Chorioretinopathy, and posterior scleritis, this is the first report of serous detachments with Roth spots as an isolated entity.
DOI: 10.6084/m9.figshare.21687593
title: Supplementary Material for: Acute Flaccid Paralysis in Australian Children from 2007 to 2017: clinical spectrum and epidemiology

description: Introduction: Acute flaccid paralysis (AFP) surveillance continues globally as part of the World Health Organization’s goal to eradicate poliomyelitis. The Australian Paediatric Surveillance Unit (APSU), Paediatric Active Enhanced Disease Surveillance (PAEDS) network, and National Enterovirus Reference Laboratory (NERL) collaborate in acute flaccid paralysis surveillance in Australia, capturing and reviewing cases of AFP for all etiologies in order to exclude poliovirus. . We aimed to describe the AFP epidemiology in childhood over an eleven year period. Methods: Data were reported nationally by paediatricians via prospective APSU surveillance, PAEDS surveillance nurses at five tertiary paediatric hospitals and NERL from 2007 to 2017. Children aged 0-15 years with AFP were included. We combined APSU, PAEDS and NERL datasets, analysed epidemiological trends and described clinical features and investigations for major diagnoses. Results: Of 590 AFP-compatible cases, 49% were male; 47% were aged 0-4 years, 9% aged &lt;1 year.. Annual incidence of AFP was 1.3 cases per 100,000 children aged &lt;15 years. Lower limb paralysis was the most frequent presenting symptom. The most frequent diagnoses were Guillain-Barre syndrome (GBS; 36%), transverse myelitis (TM; 17%) and acute disseminated encephalomyelitis (ADEM; 15%). No secular trend was seen in frequency of AFP cases nor amongst major diagnoses. Seasonality was observed with ADEM occurring more frequently in winter. We observed periods of increased AFP frequency in 2013 and 2016, coinciding with increased reporting of non-polio anterior horn cell disease (AHCD) and detection of non-polio enterovirus (NPEV). Conclusions: Estimated incidence of GBS, ADEM and TM in Australian children were comparable with international rates. There was stable incidence of AFP in Australian children between 2007 and 2017. GBS, ADEM and TM are the major causes of AFP. We observed clustering of cases associated with NPEV that emphasises a need for ongoing vigilance in surveillance given continue emerging infectious disease threats.
DOI: 10.6084/m9.figshare.22227340
title: CrudeOilTrainLoc_Flickr_2008-2022

description: Locations of crude oil train pictures downloaded from Flickr website (data between 2008-2011 are in csv format and shapefile format for those between 2012 and 2022 )
DOI: 10.6084/m9.figshare.21551676.v1
title: Dataset - Plasticity of Hypoxia Tolerance of P. degeni

description: Compilation with all R scripts and datasets for analysis of respiratory traits of <em>P. degeni</em> and their plasticity throughout normoxia exposure.
DOI: 10.5281/zenodo.7705263
title: Investigating the geometrical and optical properties of the persistent stratospheric aerosol layer observed over a Southern European lidar station during 2019

description: Simulted aerosol extinction at 550nm profiles over Thessaloniki by the IFS-CB05-BASCOE-GLOMAP system.
DOI: 10.5281/zenodo.7705262
title: Investigating the geometrical and optical properties of the persistent stratospheric aerosol layer observed over a Southern European lidar station during 2019

description: Simulted aerosol extinction at 550nm profiles over Thessaloniki by the IFS-CB05-BASCOE-GLOMAP system.
DOI: 10.25829/idiv.3474-bb7k72
title: sPlotOpen – An environmentally-balanced, open-access, global dataset of vegetation plots
DOI: 10.5517/ccdc.csd.cc25yd4p
title: CCDC 2024242: Experimental Crystal Structure Determination

description: Related Article: Lianpeng Tong, Zhiwei Qiao, Aichun Wu, Yuanlin Tang, Xinling Li, Baohua Zhang, Ai-Ju Zhou|2022|CSD Communication|||
description: Related Article: Aichun Wu, Yuanlin Tang, Xinling Li, Baohua Zhang, Aiju Zhou, Zhiwei Qiao, Lianpeng Tong|2022|J.Mater.Chem.A|10|25063|doi:10.1039/D2TA07219J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25yd6r
title: CCDC 2024244: Experimental Crystal Structure Determination

description: Related Article: Lianpeng Tong, Zhiwei Qiao, Aichun Wu, Yuanlin Tang, Xinling Li, Baohua Zhang, Ai-Ju Zhou|2022|CSD Communication|||
description: Related Article: Aichun Wu, Yuanlin Tang, Xinling Li, Baohua Zhang, Aiju Zhou, Zhiwei Qiao, Lianpeng Tong|2022|J.Mater.Chem.A|10|25063|doi:10.1039/D2TA07219J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25yd7s
title: CCDC 2024245: Experimental Crystal Structure Determination

description: Related Article: Lianpeng Tong, Zhiwei Qiao, Aichun Wu, Yuanlin Tang, Xinling Li, Baohua Zhang, Ai-Ju Zhou|2022|CSD Communication|||
description: Related Article: Aichun Wu, Yuanlin Tang, Xinling Li, Baohua Zhang, Aiju Zhou, Zhiwei Qiao, Lianpeng Tong|2022|J.Mater.Chem.A|10|25063|doi:10.1039/D2TA07219J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bv4r3
title: CCDC 2170085: Experimental Crystal Structure Determination

description: Related Article: Benny Febriansyah, Yongxin Li, David Giovanni, Teddy Salim, Thomas Hooper, Ying Sim, Daphne Ma, Shoba Laxmi, Yulia Lekina, Teck Ming Koh, Zexiang Shen, Sumod Pullarkat, Tze Chien Sum, Subodh Mhaisalkar, Joel Ager III, Nripan Mathews|2022|CSD Communication|||
description: Related Article: Benny Febriansyah, Yongxin Li, David Giovanni, Teddy Salim, Thomas J. N. Hooper, Ying Sim, Daphne Ma, Shoba Laxmi, Yulia Lekina, Teck Ming Koh, Ze Xiang Shen, Sumod A. Pullarkat, Tze Chien Sum, Subodh G. Mhaisalkar, Joel W. Ager, Nripan Mathews|2022|Materials Horizons|10|536|doi:10.1039/D2MH00868H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c2nw0
title: CCDC 2177312: Experimental Crystal Structure Determination

description: Related Article: Muhammad Qasim, Wanlu Tian, Wenmin Pang, Yao Pan, Shabnam Behzadi, Min Chen|2023|Eur.Polym.J.|185|111808|doi:10.1016/j.eurpolymj.2022.111808
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1j3rds
title: CCDC 1403785: Experimental Crystal Structure Determination

description: Related Article: Yi-Liang Hsieh, Wachara Benchaphanthawee, Hsu-Hung Teng, Ning Huang, Jia-Hao Yang, Jyun-Ru Sun, Gene-Hsiang Lee, Nawee Kungwan, Chi-How Peng|2023|Polymer|267|125687|doi:10.1016/j.polymer.2023.125687
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1j3rhw
title: CCDC 1403788: Experimental Crystal Structure Determination

description: Related Article: Yi-Liang Hsieh, Wachara Benchaphanthawee, Hsu-Hung Teng, Ning Huang, Jia-Hao Yang, Jyun-Ru Sun, Gene-Hsiang Lee, Nawee Kungwan, Chi-How Peng|2023|Polymer|267|125687|doi:10.1016/j.polymer.2023.125687
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ddrh2
title: CCDC 2216794: Experimental Crystal Structure Determination

description: Related Article: Keshav Kumar, Agrima Datta, Jyoti Rohilla, Sahil Thakur, Raghubir Singh, Varinder Kaur|2023|Spectrochim.Acta,Part A|294|122521|doi:10.1016/j.saa.2023.122521
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ddrj3
title: CCDC 2216795: Experimental Crystal Structure Determination

description: Related Article: Keshav Kumar, Agrima Datta, Jyoti Rohilla, Sahil Thakur, Raghubir Singh, Varinder Kaur|2023|Spectrochim.Acta,Part A|294|122521|doi:10.1016/j.saa.2023.122521
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.22227043.v1
title: Data from: Moderate precipitation reduction enhances nitrogen cycling and soil nitrous oxide emissions in a semi-arid grassland

description: The ongoing climate change is predicted to induce more weather extremes such as frequent drought and high-intensity precipitation events, causing more severe drying-rewetting cycles in soil. However, it remains largely unknown how these changes will affect soil nitrogen (N)-cycling microbes and the emissions of potent greenhouse gas nitrous oxide (N<sub>2</sub>O). Utilizing a field precipitation manipulation in a semi-arid grassland on the Loess Plateau, we examined how precipitation reduction (ca. −30%) influenced soil N<sub>2</sub>O and carbon dioxide (CO<sub>2</sub>) emissions in field, and in a complementary lab-incubation with simulated drying-rewetting cycles. Results obtained showed that precipitation reduction stimulated plant root turnover and N-cycling processes, enhancing soil N<sub>2</sub>O and CO<sub>2</sub> emissions in field, particularly after each rainfall event. Also, high-resolution isotopic analyses revealed that field soil N<sub>2</sub>O emissions primarily originated from nitrification process. The incubation experiment further showed that in field soils under precipitation reduction, drying-rewetting stimulated N mineralization and ammonia-oxidizing bacteria in favor of genera <em>Nitrosospira</em> and <em>Nitrosovibrio</em>, increasing nitrification and N<sub>2</sub>O emissions. These findings suggest that moderate precipitation reduction, accompanied with changes in drying-rewetting cycles under future precipitation scenarios, may enhance N cycling processes and soil N<sub>2</sub>O emissions in semi-arid ecosystems, feeding positively back to the ongoing climate change.
DOI: 10.6084/m9.figshare.22227043.v2
title: Moderate precipitation reduction enhances nitrogen cycling and soil nitrous oxide emissions in a semi-arid grassland

description: The ongoing climate change is predicted to induce more weather extremes such as frequent drought and high-intensity precipitation events, causing more severe drying-rewetting cycles in soil. However, it remains largely unknown how these changes will affect soil nitrogen (N)-cycling microbes and the emissions of potent greenhouse gas nitrous oxide (N<sub>2</sub>O). Utilizing a field precipitation manipulation in a semi-arid grassland on the Loess Plateau, we examined how precipitation reduction (ca. −30%) influenced soil N<sub>2</sub>O and carbon dioxide (CO<sub>2</sub>) emissions in field, and in a complementary lab-incubation with simulated drying-rewetting cycles. Results obtained showed that precipitation reduction stimulated plant root turnover and N-cycling processes, enhancing soil N<sub>2</sub>O and CO<sub>2</sub> emissions in field, particularly after each rainfall event. Also, high-resolution isotopic analyses revealed that field soil N<sub>2</sub>O emissions primarily originated from nitrification process. The incubation experiment further showed that in field soils under precipitation reduction, drying-rewetting stimulated N mineralization and ammonia-oxidizing bacteria in favor of genera <em>Nitrosospira</em> and <em>Nitrosovibrio</em>, increasing nitrification and N<sub>2</sub>O emissions. These findings suggest that moderate precipitation reduction, accompanied with changes in drying-rewetting cycles under future precipitation scenarios, may enhance N cycling processes and soil N<sub>2</sub>O emissions in semi-arid ecosystems, feeding positively back to the ongoing climate change.