cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22773449.v1
title: Framework of ecological infrastructure construction based on landsenses ecology: meeting natural and human needs

description: Ecological infrastructure (EI) is an essential urban infrastructure that is not only related to ecological resilience but the human needed ecosystem services. However, most studies overlook EI’s multi-functional benefits, especially the importance of residents’ satisfaction. As a typical nature-based solutions (NbS) through ecological engineering, EI construction should abide by the laws of nature and consider the requirements of human well-being. Based on the theory of landsenses ecology (LE), this study proposes a framework, including construction ideas, approaches, principles, and construction flow, to guide the whole process of EI construction, meeting natural and human needs. Moreover, a practice including EI facilities and an Internet of Things (IoT) monitoring system construction has been taken in Sangdong, Huizhou, Guangdong-Hong Kong-Macao Greater Bay Area (GBA), China. The practice study indicates that the proposed framework of EI construction can successfully restore the regional ecological environment quality and play a significant role in restoring the black-odorous waterbodies to their original ecological vitality. Secondly, using social surveys to thoroughly analyze residents’ physical, psychological, and cultural perceptions and integrating their visions into the EI design scheme can improve residents’ satisfaction and support human well-being. Besides, IoT technology is helpful for digital EI supervision, dealing with real-time, online, and quantitative benefit evaluation and management. This paper focuses on practical exploration and experience sharing of how EI construction meets natural and human needs, aiming at providing experience and ideas for adequate urban ecological infrastructure (UEI) construction to support human and nature development hand in hand.
DOI: 10.6084/m9.figshare.12806005.v1
title: Additional file 5 of HAK/KUP/KT family potassium transporter genes are involved in potassium deficiency and stress responses in tea plants (Camellia sinensis L.): expression and functional analysis

description: Additional file 5: Table S2. HAK/KUP/KT family genes in Arabidopsis thaliana, Oryza sativa, Populus trichocarpa, Vitis vinifera .
DOI: 10.6084/m9.figshare.22767339
title: Additional file 2 of Machine learning models for prediction of invasion Klebsiella pneumoniae liver abscess syndrome in diabetes mellitus: a singled centered retrospective study

description: Additional file 2: Table S2. Tuning parameters of the predictive models.
DOI: 10.6084/m9.figshare.22767339.v1
title: Additional file 2 of Machine learning models for prediction of invasion Klebsiella pneumoniae liver abscess syndrome in diabetes mellitus: a singled centered retrospective study

description: Additional file 2: Table S2. Tuning parameters of the predictive models.
DOI: 10.15468/k3g27x
title: List of representatives of fauna of Ukraine protected according to the Appendix III of the Bern Convention on the Conservation of European Wildlife and Natural Habitats (Bern Convention)

description: The checklist consists of species of fauna of Ukraine protected according to the Appendix II of the Bern Convention on the Conservation of European Wildlife and Natural Habitats (Bern Convention), 1979. In Ukraine this convention was signed on August 17th, 1998, ratified on January 5th, 1999 with subsequent entry into force on May 1st, 1999.
DOI: 10.6084/m9.figshare.8093450
title: Additional file 5: of Hierarchical cooperation of transcription factors from integration analysis of DNA sequences, ChIP-Seq and ChIA-PET data

description: The biclustering results of cliques and genes. We adopt the 51 cliques and 1223 regulated genes of K562 as an example and apply the biclustering method fabia to group cliques and genes into 10 classes. The specific clique and gene list for each superclique (Si, represented by a blue square) and gene group (Gi, represented by a gray circle) are listed. (XLSX 22 kb)
DOI: 10.6084/m9.figshare.12805975
title: Additional file 8 of Wheat root transcriptional responses against Gaeumannomyces graminis var. tritici

description: Additional file 8: Table S6. The log2 fold change values from readcounts in Ggt-inoculated and healthy control wheat roots. (XLS 568 kb)
DOI: 10.6084/m9.figshare.22767354.v1
title: Additional file 1 of Mapping splice QTLs reveals distinct transcriptional and post-transcriptional regulatory variation of gene expression and identifies putative alternative splicing variation mediating complex trait variation in pigs

description: Additional file 1.
DOI: 10.6084/m9.figshare.12805917
title: Additional file 1 of Development and characterization of acidic-pH-tolerant mutants of Zymomonas mobilis through adaptation and next-generation sequencing-based genome resequencing and RNA-Seq

description: Additional file 1: Table S1. List of all significantly differentially expressed genes between different strains in different conditions. P is −log10(P-value).
DOI: 10.6084/m9.figshare.12806008.v1
title: Additional file 6 of HAK/KUP/KT family potassium transporter genes are involved in potassium deficiency and stress responses in tea plants (Camellia sinensis L.): expression and functional analysis

description: Additional file 6: Table S3. Information of the conserved motifs in CsHAKs.
DOI: 10.6084/m9.figshare.12806014.v1
title: Additional file 8 of HAK/KUP/KT family potassium transporter genes are involved in potassium deficiency and stress responses in tea plants (Camellia sinensis L.): expression and functional analysis

description: Additional file 8: Table S5. Cis-acting elements identified from the CsHAKs promoters of tea plants.
DOI: 10.6084/m9.figshare.12806014
title: Additional file 8 of HAK/KUP/KT family potassium transporter genes are involved in potassium deficiency and stress responses in tea plants (Camellia sinensis L.): expression and functional analysis

description: Additional file 8: Table S5. Cis-acting elements identified from the CsHAKs promoters of tea plants.
DOI: 10.6084/m9.figshare.22767422
title: Additional file 2 of Comprehensive analysis of a cuproptosis-related ceRNA network implicates a potential endocrine therapy resistance mechanism in ER-positive breast cancer

description: Additional file 2. The immunotherapy response prediction results of all the BC samples in TCGA-BRCA based on TIDE algorithm.
DOI: 10.6084/m9.figshare.12805969
title: Additional file 6 of Wheat root transcriptional responses against Gaeumannomyces graminis var. tritici

description: Additional file 6: Table S4. The results of gene annotation. (XLS 36519 kb)
DOI: 10.6084/m9.figshare.12806002
title: Additional file 4 of HAK/KUP/KT family potassium transporter genes are involved in potassium deficiency and stress responses in tea plants (Camellia sinensis L.): expression and functional analysis

description: Additional file 4: Table S1. List of primers used in this study.
DOI: 10.6084/m9.figshare.12806005
title: Additional file 5 of HAK/KUP/KT family potassium transporter genes are involved in potassium deficiency and stress responses in tea plants (Camellia sinensis L.): expression and functional analysis

description: Additional file 5: Table S2. HAK/KUP/KT family genes in Arabidopsis thaliana, Oryza sativa, Populus trichocarpa, Vitis vinifera .
DOI: 10.6084/m9.figshare.22767419.v1
title: Additional file 1 of Comprehensive analysis of a cuproptosis-related ceRNA network implicates a potential endocrine therapy resistance mechanism in ER-positive breast cancer

description: Additional file 1. The gene list of 38 common checkpoint regulators retrieved from literature.
DOI: 10.6084/m9.figshare.12805969.v1
title: Additional file 6 of Wheat root transcriptional responses against Gaeumannomyces graminis var. tritici

description: Additional file 6: Table S4. The results of gene annotation. (XLS 36519 kb)
DOI: 10.6084/m9.figshare.22767422.v1
title: Additional file 2 of Comprehensive analysis of a cuproptosis-related ceRNA network implicates a potential endocrine therapy resistance mechanism in ER-positive breast cancer

description: Additional file 2. The immunotherapy response prediction results of all the BC samples in TCGA-BRCA based on TIDE algorithm.
DOI: 10.6084/m9.figshare.12805972
title: Additional file 7 of Wheat root transcriptional responses against Gaeumannomyces graminis var. tritici

description: Additional file 7: Table S5. The FPKM values in Ggt-inoculated and healthy control wheat roots. (XLS 9033 kb)
DOI: 10.6084/m9.figshare.12806017
title: Additional file 9 of HAK/KUP/KT family potassium transporter genes are involved in potassium deficiency and stress responses in tea plants (Camellia sinensis L.): expression and functional analysis

description: Additional file 9: Table S6. Expression levels of CsHAKs in different tissues of tea plants.
DOI: 10.6084/m9.figshare.12805975.v1
title: Additional file 8 of Wheat root transcriptional responses against Gaeumannomyces graminis var. tritici

description: Additional file 8: Table S6. The log2 fold change values from readcounts in Ggt-inoculated and healthy control wheat roots. (XLS 568 kb)
DOI: 10.6084/m9.figshare.12805978
title: Additional file 9 of Wheat root transcriptional responses against Gaeumannomyces graminis var. tritici

description: Additional file 9: Table S7. The KEGG pathways in Ggt-inoculated and healthy control wheat roots. (XLS 91 kb)
DOI: 10.6084/m9.figshare.12805978.v1
title: Additional file 9 of Wheat root transcriptional responses against Gaeumannomyces graminis var. tritici

description: Additional file 9: Table S7. The KEGG pathways in Ggt-inoculated and healthy control wheat roots. (XLS 91 kb)
DOI: 10.5281/zenodo.10569643
title: Data and scripts for the RaFSIP scheme

description: This repository contains microphysics routines, scripts, and processed data from the Weather Research and Forecasting (WRF) model simulations presented in the paper "RaFSIP: Parameterizing ice multiplication in models using a machine learning approach", by Paraskevi Georgakaki and Athanasios Nenes.

RaFSIP is a data-driven parameterization designed to streamline the representation of Secondary Ice Production (SIP) in large-scale models.

Preprint available on Authorea: https://doi.org/10.22541/essoar.170365383.34520011/v1
DOI: 10.6084/m9.figshare.23822271
title: The complete chloroplast genome of <i>Grewia biloba</i> var. <i>parviflora</i> (Bunge) Hand.-Mazz. (Malvaceae)

description: <i>Grewia biloba</i> var. <i>parviflora</i> (Bunge) Hand.-Mazz. (1933), a shrub or small tree, is native to northern and southern China. It is an excellent relief and medicinal plant. The complete chloroplast genome is 158,043 bp in length, with a large single-copy region of 86,957 bp, a small single-copy region of 20,138 bp, two inverted repeat regions of 25,474 bp each, and a GC content of 37.4%. There were 129 genes annotated, including 84 known protein-coding genes, 37 tRNAs, and eight rRNAs. The phylogenetic trees are constructed using plastome data from 38 species and the maximum-likelihood method. The results of the chloroplast genome-wide analysis and the phylogenetic tree show the taxonomic phylogeny of the <i>G. biloba</i> var. <i>parviflora</i> in relation to other species, increasing the accuracy of the phylogenetic classification of the plant.
DOI: 10.6084/m9.figshare.23822271.v1
title: The complete chloroplast genome of <i>Grewia biloba</i> var. <i>parviflora</i> (Bunge) Hand.-Mazz. (Malvaceae)

description: <i>Grewia biloba</i> var. <i>parviflora</i> (Bunge) Hand.-Mazz. (1933), a shrub or small tree, is native to northern and southern China. It is an excellent relief and medicinal plant. The complete chloroplast genome is 158,043 bp in length, with a large single-copy region of 86,957 bp, a small single-copy region of 20,138 bp, two inverted repeat regions of 25,474 bp each, and a GC content of 37.4%. There were 129 genes annotated, including 84 known protein-coding genes, 37 tRNAs, and eight rRNAs. The phylogenetic trees are constructed using plastome data from 38 species and the maximum-likelihood method. The results of the chloroplast genome-wide analysis and the phylogenetic tree show the taxonomic phylogeny of the <i>G. biloba</i> var. <i>parviflora</i> in relation to other species, increasing the accuracy of the phylogenetic classification of the plant.
DOI: 10.6084/m9.figshare.12806002.v1
title: Additional file 4 of HAK/KUP/KT family potassium transporter genes are involved in potassium deficiency and stress responses in tea plants (Camellia sinensis L.): expression and functional analysis

description: Additional file 4: Table S1. List of primers used in this study.
DOI: 10.6084/m9.figshare.12806008
title: Additional file 6 of HAK/KUP/KT family potassium transporter genes are involved in potassium deficiency and stress responses in tea plants (Camellia sinensis L.): expression and functional analysis

description: Additional file 6: Table S3. Information of the conserved motifs in CsHAKs.
DOI: 10.6084/m9.figshare.8087474
title: Additional file 6: of Exploring the adaptive mechanism of Passiflora edulis in karst areas via an integrative analysis of nutrient elements and transcriptional profiles

description: Table S2. The details of DEGs enriched in KEGG pathways. (XLS 28 kb)
DOI: 10.6084/m9.figshare.22249474
title: Widespread INVs shape the genetic and phenotypic diversity in rice

description: Detected INVs from long sequencing dataset of 377 cultivated and wild rice accessions.
DOI: 10.6084/m9.figshare.8087465.v1
title: Additional file 5: of Exploring the adaptive mechanism of Passiflora edulis in karst areas via an integrative analysis of nutrient elements and transcriptional profiles

description: Table S1. The annotation of DEGs listed in Table 4. (XLS 55 kb)
DOI: 10.6084/m9.figshare.12806017.v1
title: Additional file 9 of HAK/KUP/KT family potassium transporter genes are involved in potassium deficiency and stress responses in tea plants (Camellia sinensis L.): expression and functional analysis

description: Additional file 9: Table S6. Expression levels of CsHAKs in different tissues of tea plants.
DOI: 10.6084/m9.figshare.20152334
title: Papain meliorates the monocyte-platelet aggregates formation-mediated inflammatory response in monocytes by up-regulating miRNA-146a transcription

description: Many studies have demonstrated that the formation of monocyte-platelet aggregates (MPAs) contributes to atherosclerosis, and is the major risk factor of cardiovascular events. Therefore, looking for the inhibitors of MPAs-activated monocytes would be of great significance. However, within our knowledge, little studies about this issue have been performed. In our previous study, papain exhibited an anti-inflammation effect by inhibiting MPAs-mediated NF-κB pathway activation of monocytes. The present study revealed that papain can suppress the MPAs-mediated expression of inflammatory mediators in activated monocytes by up-regulating miRNA-146a transcription. The findings may provide a new theory for papain in intervening the inflammatory process promoted by NF-κB pathway activation. This study is one part of our persistent research on the potential anti-AS effects of papain, and the results may be the unique findings of papain in the scope of anti-atherosclerosis through the inhibition of monocytes activation by the interaction of monocyte and platelet.
DOI: 10.6084/m9.figshare.24346693
title: Genotyping data for <i>Quercus</i> <i>aliena</i> and <i>Q</i><i>uercus dent</i><i>ata</i>

description: "SSR_ALL.txt" is the genotyping data for all 538 samples of the <i>Quercus aliena </i>and<i> Quercus dentata</i> scored using Genemarker v. 2.2, then normalized the score by FlexiBinv2 in TXT format.
DOI: 10.6084/m9.figshare.24346705
title: Leaf morphological database of <i>Quercus aliena</i> and <i>Quercus dentata</i>

description: Leaf morphological data for all samples of <i>Quercus aliena</i> and <i>Quercus dentata</i> data produced by Image J program in TXT format (2328 leaves in total).
DOI: 10.6084/m9.figshare.22767465.v1
title: Additional file 3 of Promoting AMPK/SR-A1-mediated clearance of HMGB1 attenuates chemotherapy-induced peripheral neuropathy

description: Additional file 2: Raw data.
DOI: 10.6084/m9.figshare.22767465
title: Additional file 3 of Promoting AMPK/SR-A1-mediated clearance of HMGB1 attenuates chemotherapy-induced peripheral neuropathy

description: Additional file 2: Raw data.
DOI: 10.6084/m9.figshare.22767461.v1
title: Additional file 7 of Transcriptomic profiling of near-isogenic lines reveals candidate genes for a significant locus conferring metribuzin resistance in wheat

description: Supplementary Material 7
DOI: 10.15468/dl.cj9yt6
title: Occurrence Download

description: A dataset containing 847942 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aythya ferina (Linnaeus, 1758)",
 "Year 1980-2020"
 ]
}

 The dataset includes 847942 records from 493 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066852-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ftw3v3
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-3.86205 50.22066,-2.10349 50.22066,-2.10349 50.92378,-3.86205 50.92378,-3.86205 50.22066))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Virgularia mirabilis (Müller, 1776)"
 ]
}

 The dataset includes 42 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0260107-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rq9qmy
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leopardus jacobitus (Cornalia, 1865)"
 ]
}

 The dataset includes 53 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080423-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sb5f48
title: Occurrence Download

description: A dataset containing 1241 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Crocodylus acutus (Cuvier, 1807)"
 ]
}

 The dataset includes 1241 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0304558-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.df7sax
title: Occurrence Download

description: A dataset containing 252 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Colección de Quelonios Museo de La Salle Bogotá (MLS)"
 ]
}

 The dataset includes 252 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081105-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c3yqco
title: Occurrence Download

description: A dataset containing 66 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arremonops conirostris (Bonaparte, 1850)",
 "Country is Brazil"
 ]
}

 The dataset includes 66 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000415-150721130643939/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qeudsh
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stylidium laciniatum C.A.Gardner"
 ]
}

 The dataset includes 50 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043581-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sra53b
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Bothrocophias hyoprora (Amaral, 1935)"
 ]
}

 The dataset includes 33 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0317472-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ywexc6
title: Occurrence Download

description: A dataset containing 5781 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Geometry POLYGON((-125.49957 23.37959,-59.06628 23.37959,-59.06628 47.5993,-125.49957 47.5993,-125.49957 23.37959))",
 "TaxonKey is Lythrum salicaria L."
 ]
}

 The dataset includes 5781 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081106-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fjdz3j
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phymaturus roigorum Lobo & Abdala, 2007"
 ]
}

 The dataset includes 78 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0240367-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ztpvts
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lysmata ankeri Rhyne & Lin, 2006"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000415-150811131857512/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g2bnz8
title: Occurrence Download

description: A dataset containing 1203 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Schefflera arboricola (Hayata) Merr."
 ]
}

 The dataset includes 1203 records from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0312193-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uma525
title: Occurrence Download

description: A dataset containing 681 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Colombia",
 "Country is United States of America"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Persea americana Mill."
 ]
}

 The dataset includes 681 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081107-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.