cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19672341
title: Electrically evoked auditory cortical responses elicited from individually fitted stimulation parameters in cochlear implant users

description: To investigate electrically evoked auditory cortical responses (eACR) elicited from the stimulation of intracochlear electrodes based on individually fitted stimulation parameters in cochlear implant (CI) users. An eACR setup based on individual fitting parameters is proposed. A 50-ms alternating biphasic pulse train was used to stimulate apical, medial, and basal electrodes and to evoke auditory cortical potentials (N1-P2 complex). The eACR setup proposed was validated with 14 adult CI users. Individual and grand-average eACR waveforms were obtained. The eACR amplitudes were lower in the basal than in the apical and medial regions. Earlier N1 latencies were found in CI users with lower maximum comfortable loudness levels and shorter phase duration in response to apical stimulation, while medial and basal stimulation resulted in earlier N1 latencies and larger N1-P2 amplitudes in users with longer CI experience. eACR could be elicited by direct intracochlear stimulation using individual fitting parameters with a success rate of 71%. The highest cortical peak-to-peak amplitudes were obtained in response to apical stimulation. Unlike the P2, the N1 component appeared to be a consistent cortical potential to determine eACR and gain knowledge of the auditory processing beyond the cochlea in CI users.
HighlightseACR can be elicited through direct stimulation of intracochlear electrodes.Stimulation of apical and medial regions yielded the highest N1-P2 amplitudes.CI users with lower maximum comfortable loudness levels had shorter N1 latencies during apical stimulation.The present dataset of mainly well-performing CI users suggests better cortical processing, that is, higher amplitudes and shorter latencies of N1.The N1 potential appears a more consistent and reliable potential than the P2 to determine eACR responses in CI users. eACR can be elicited through direct stimulation of intracochlear electrodes. Stimulation of apical and medial regions yielded the highest N1-P2 amplitudes. CI users with lower maximum comfortable loudness levels had shorter N1 latencies during apical stimulation. The present dataset of mainly well-performing CI users suggests better cortical processing, that is, higher amplitudes and shorter latencies of N1. The N1 potential appears a more consistent and reliable potential than the P2 to determine eACR responses in CI users.
DOI: 10.6084/m9.figshare.19672341.v1
title: Electrically evoked auditory cortical responses elicited from individually fitted stimulation parameters in cochlear implant users

description: To investigate electrically evoked auditory cortical responses (eACR) elicited from the stimulation of intracochlear electrodes based on individually fitted stimulation parameters in cochlear implant (CI) users. An eACR setup based on individual fitting parameters is proposed. A 50-ms alternating biphasic pulse train was used to stimulate apical, medial, and basal electrodes and to evoke auditory cortical potentials (N1-P2 complex). The eACR setup proposed was validated with 14 adult CI users. Individual and grand-average eACR waveforms were obtained. The eACR amplitudes were lower in the basal than in the apical and medial regions. Earlier N1 latencies were found in CI users with lower maximum comfortable loudness levels and shorter phase duration in response to apical stimulation, while medial and basal stimulation resulted in earlier N1 latencies and larger N1-P2 amplitudes in users with longer CI experience. eACR could be elicited by direct intracochlear stimulation using individual fitting parameters with a success rate of 71%. The highest cortical peak-to-peak amplitudes were obtained in response to apical stimulation. Unlike the P2, the N1 component appeared to be a consistent cortical potential to determine eACR and gain knowledge of the auditory processing beyond the cochlea in CI users.
HighlightseACR can be elicited through direct stimulation of intracochlear electrodes.Stimulation of apical and medial regions yielded the highest N1-P2 amplitudes.CI users with lower maximum comfortable loudness levels had shorter N1 latencies during apical stimulation.The present dataset of mainly well-performing CI users suggests better cortical processing, that is, higher amplitudes and shorter latencies of N1.The N1 potential appears a more consistent and reliable potential than the P2 to determine eACR responses in CI users. eACR can be elicited through direct stimulation of intracochlear electrodes. Stimulation of apical and medial regions yielded the highest N1-P2 amplitudes. CI users with lower maximum comfortable loudness levels had shorter N1 latencies during apical stimulation. The present dataset of mainly well-performing CI users suggests better cortical processing, that is, higher amplitudes and shorter latencies of N1. The N1 potential appears a more consistent and reliable potential than the P2 to determine eACR responses in CI users.
DOI: 10.6084/m9.figshare.19726063
title: Non-negative matrix factorization improves the efficiency of recording frequency-following responses in normal-hearing adults and neonates

description: One challenge in extracting the scalp-recorded frequency-following response (FFR) is related to its inherently small amplitude, which means that the response cannot be identified with confidence when only a relatively small number of recording sweeps are included in the averaging procedure. This study examined how the non-negative matrix factorisation (NMF) algorithm with a source separation constraint could be applied to improve the efficiency of FFR recordings. Conventional FFRs elicited by an English vowel/i/with a rising frequency contour were collected. <i>Study sample</i>: Fifteen normal-hearing adults and 15 normal-hearing neonates were recruited. The improvements of FFR recordings, defined as the correlation coefficient and root-mean-square differences across a sweep series of amplitude spectrograms before and after the application of the source separation NMF (SSNMF) algorithm, were characterised through an exponential curve fitting model. Statistical analysis of variance indicated that the SSNMF algorithm was able to enhance the FFRs recorded in both groups of participants. Such improvements enabled FFR extractions in a relatively small number of recording sweeps, and opened a new window to better understand how speech sounds are processed in the human brain.
DOI: 10.6084/m9.figshare.19726063.v1
title: Non-negative matrix factorization improves the efficiency of recording frequency-following responses in normal-hearing adults and neonates

description: One challenge in extracting the scalp-recorded frequency-following response (FFR) is related to its inherently small amplitude, which means that the response cannot be identified with confidence when only a relatively small number of recording sweeps are included in the averaging procedure. This study examined how the non-negative matrix factorisation (NMF) algorithm with a source separation constraint could be applied to improve the efficiency of FFR recordings. Conventional FFRs elicited by an English vowel/i/with a rising frequency contour were collected. <i>Study sample</i>: Fifteen normal-hearing adults and 15 normal-hearing neonates were recruited. The improvements of FFR recordings, defined as the correlation coefficient and root-mean-square differences across a sweep series of amplitude spectrograms before and after the application of the source separation NMF (SSNMF) algorithm, were characterised through an exponential curve fitting model. Statistical analysis of variance indicated that the SSNMF algorithm was able to enhance the FFRs recorded in both groups of participants. Such improvements enabled FFR extractions in a relatively small number of recording sweeps, and opened a new window to better understand how speech sounds are processed in the human brain.
DOI: 10.6084/m9.figshare.19766836
title: Evaluation of health service outcomes for an audiology first point of contact retrocochlear clinic: a 6-year retrospective cohort study

description: Although existing studies of audiology first point of contact clinics which screen for retrocochlear pathology have demonstrated positive clinical outcomes, they have provided limited information regarding service impacts. Thus, this study aimed to evaluate both the clinical and health service outcomes of an audiology first point of contact (FPOC) clinic for adults referred to ENT services with suspected retrocochlear pathology. Retrospective cohort study. All 1123 patients referred to the clinic over a 6-year period (2013–2019). Most (73.7%) of the 1123 patients referred to the Retrocochlear Clinic were managed and discharged by the audiologist and did not require ENT appointment. Almost half (43.1%) were directly referred for MRI imaging, of which 4 (1.1%) were diagnosed with Vestibular Schwannoma. Waiting times for first appointments significantly (<i>p</i> &lt; 0.001) reduced from a median of 748 days to 63.5 days over the 6-year period. Attendance rates also significantly (<i>p</i> &lt; 0.001) improved over this time (from 52.2% to 90%). There were no adverse events reported. Of those discharged without attending an ENT appointment, 1.8% were rereferred to ENT within 12 months of discharge. This audiology FPOC Retrocochlear Clinic was shown to be a safe and effective alternative service model.
DOI: 10.6084/m9.figshare.19766836.v1
title: Evaluation of health service outcomes for an audiology first point of contact retrocochlear clinic: a 6-year retrospective cohort study

description: Although existing studies of audiology first point of contact clinics which screen for retrocochlear pathology have demonstrated positive clinical outcomes, they have provided limited information regarding service impacts. Thus, this study aimed to evaluate both the clinical and health service outcomes of an audiology first point of contact (FPOC) clinic for adults referred to ENT services with suspected retrocochlear pathology. Retrospective cohort study. All 1123 patients referred to the clinic over a 6-year period (2013–2019). Most (73.7%) of the 1123 patients referred to the Retrocochlear Clinic were managed and discharged by the audiologist and did not require ENT appointment. Almost half (43.1%) were directly referred for MRI imaging, of which 4 (1.1%) were diagnosed with Vestibular Schwannoma. Waiting times for first appointments significantly (<i>p</i> &lt; 0.001) reduced from a median of 748 days to 63.5 days over the 6-year period. Attendance rates also significantly (<i>p</i> &lt; 0.001) improved over this time (from 52.2% to 90%). There were no adverse events reported. Of those discharged without attending an ENT appointment, 1.8% were rereferred to ENT within 12 months of discharge. This audiology FPOC Retrocochlear Clinic was shown to be a safe and effective alternative service model.
DOI: 10.25919/8624-rg56
title: Indonesian Hybrid Landcover 2020 - GeoTIFF

description: This dataset is a 10m resolution, Land Use/Land Cover (LULC) GeoTIFF, created from several open source data products and covering the Republic of Indonesia and the Federation of Malaysia for the year 2019/2020. This dataset is used in an interactive R Shiny application to generate landscape metrics at user defined locations.
DOI: 10.5281/zenodo.10449477
title: Benchmarks used for Approximate Model Counting

description: These are the benchmark files that were used to check the performance of ApproxMC over the years. These benchmarks are the ones present in all ApprocMC papers so far.
DOI: 10.5281/zenodo.10449476
title: Benchmarks used for Approximate Model Counting

description: These are the benchmark files that were used to check the performance of ApproxMC over the years. These benchmarks are the ones present in all ApprocMC papers so far.
DOI: 10.34740/kaggle/ds/4246786
title: Trending eBay Phone Charger Prices Dataset🔋🔌⚡
DOI: 10.5517/ccdc.csd.cc2gswtz
title: CCDC 2288042: Experimental Crystal Structure Determination

description: Related Article: Ana M. Gómez, L. Infantes, J. Ticona-Chambi, Eduardo Duque-Redondo, Leire Gartzia-Rivero, Clara Uriel, Jorge Bañuelos, Inmaculada García-Moreno, J. Cristobal López|2024|J.Mol.Liq.|394|123773|doi:10.1016/j.molliq.2023.123773
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gswv0
title: CCDC 2288043: Experimental Crystal Structure Determination

description: Related Article: Ana M. Gómez, L. Infantes, J. Ticona-Chambi, Eduardo Duque-Redondo, Leire Gartzia-Rivero, Clara Uriel, Jorge Bañuelos, Inmaculada García-Moreno, J. Cristobal López|2024|J.Mol.Liq.|394|123773|doi:10.1016/j.molliq.2023.123773
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gswx2
title: CCDC 2288045: Experimental Crystal Structure Determination

description: Related Article: Ana M. Gómez, L. Infantes, J. Ticona-Chambi, Eduardo Duque-Redondo, Leire Gartzia-Rivero, Clara Uriel, Jorge Bañuelos, Inmaculada García-Moreno, J. Cristobal López|2024|J.Mol.Liq.|394|123773|doi:10.1016/j.molliq.2023.123773
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gswy3
title: CCDC 2288046: Experimental Crystal Structure Determination

description: Related Article: Ana M. Gómez, L. Infantes, J. Ticona-Chambi, Eduardo Duque-Redondo, Leire Gartzia-Rivero, Clara Uriel, Jorge Bañuelos, Inmaculada García-Moreno, J. Cristobal López|2024|J.Mol.Liq.|394|123773|doi:10.1016/j.molliq.2023.123773
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gswz4
title: CCDC 2288047: Experimental Crystal Structure Determination

description: Related Article: Ana M. Gómez, L. Infantes, J. Ticona-Chambi, Eduardo Duque-Redondo, Leire Gartzia-Rivero, Clara Uriel, Jorge Bañuelos, Inmaculada García-Moreno, J. Cristobal López|2024|J.Mol.Liq.|394|123773|doi:10.1016/j.molliq.2023.123773
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gsx06
title: CCDC 2288048: Experimental Crystal Structure Determination

description: Related Article: Ana M. Gómez, L. Infantes, J. Ticona-Chambi, Eduardo Duque-Redondo, Leire Gartzia-Rivero, Clara Uriel, Jorge Bañuelos, Inmaculada García-Moreno, J. Cristobal López|2024|J.Mol.Liq.|394|123773|doi:10.1016/j.molliq.2023.123773
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gwj85
title: CCDC 2290567: Experimental Crystal Structure Determination

description: Related Article: Marina Rincon Nocito, Dominic S. Wright, Andrew D. Bond|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.24233251
title: <i>Amanita fulvogrisea </i>Illescas sp. nov., alignement, ML and BI trees.

description: <i>Amanita fulvogrisea</i> Illescas, <i>sp</i>. <i>nov</i>. Crous PW, Costa MM, Kandemir H, et al. 2023. Fungal Planet description 1551 – 1613. <br>DOI: https://doi.org/10.3767/persoonia.2023.51.08Maximum likelihood (ML) tree in Nexus format obtained from the combination of 40 ITS + LSU sequences, showing in the branches the ML bootstrap support (ML-bs) calculated with IQ-TREE v. 2.1.3 (Nguyen et al. 2015), performing 300 standard bootstrap replicates, and applying the models selected with ModelFinder for each of the partitions used: TPM2+F+G4 for ITS, and TN+F+I for LSU.Bayesian inference (BI) tree in Nexus format obtained from the combination of 40 ITS + LSU sequences, showing in the branches the Bayesian posterior probability (BPP) calculated with MrBayes v. 3.2 (Ronquist et al. 2012), performing 1000000 generations, and applying the models selected with ModelFinder (S. Kalyaanamoorthy, B.Q. Minh, T.K.F. Wong, A. von Haeseler, L.S. Jermiin<b> </b>(2017) ModelFinder: Fast model selection for accurate phylogenetic estimates. <i>Nat. Methods</i>, 14:587-589) for each of the partitions used: TPM2+F+G4 for ITS, and TN+F+I for LSU.Nexus format alignment of 30 taxa of <i>Amanita</i> section <i>Vaginatae</i>, Clade 5 obtained with Mafft online, L-ins-i strategy (Katoh, Rozewicki, Yamada 2019 (Briefings in Bioinformatics 20:1160-1166). MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization), and manually adjusted with Bioedit 7.2.5 (Hall, T.A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids. Symp. Ser. 41:95-98).
DOI: 10.6084/m9.figshare.24233251.v2
title: <i>Amanita fulvogrisea </i>Illescas sp. nov., alignement, ML and BI trees.

description: <i>Amanita fulvogrisea</i> Illescas, <i>sp</i>. <i>nov</i>. Crous PW, Costa MM, Kandemir H, et al. 2023. Fungal Planet description 1551 – 1613. <br>DOI: https://doi.org/10.3767/persoonia.2023.51.08Maximum likelihood (ML) tree in Nexus format obtained from the combination of 40 ITS + LSU sequences, showing in the branches the ML bootstrap support (ML-bs) calculated with IQ-TREE v. 2.1.3 (Nguyen et al. 2015), performing 300 standard bootstrap replicates, and applying the models selected with ModelFinder for each of the partitions used: TPM2+F+G4 for ITS, and TN+F+I for LSU.Bayesian inference (BI) tree in Nexus format obtained from the combination of 40 ITS + LSU sequences, showing in the branches the Bayesian posterior probability (BPP) calculated with MrBayes v. 3.2 (Ronquist et al. 2012), performing 1000000 generations, and applying the models selected with ModelFinder (S. Kalyaanamoorthy, B.Q. Minh, T.K.F. Wong, A. von Haeseler, L.S. Jermiin<b> </b>(2017) ModelFinder: Fast model selection for accurate phylogenetic estimates. <i>Nat. Methods</i>, 14:587-589) for each of the partitions used: TPM2+F+G4 for ITS, and TN+F+I for LSU.Nexus format alignment of 30 taxa of <i>Amanita</i> section <i>Vaginatae</i>, Clade 5 obtained with Mafft online, L-ins-i strategy (Katoh, Rozewicki, Yamada 2019 (Briefings in Bioinformatics 20:1160-1166). MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization), and manually adjusted with Bioedit 7.2.5 (Hall, T.A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids. Symp. Ser. 41:95-98).
DOI: 10.6084/m9.figshare.24233251.v1
title: <i>Amanita fulvogrisea </i>Illescassp. nov., alignement, ML and BI trees.

description: <i>Amanita fulvogrisea</i> Illescas, <i>sp</i>. <i>nov</i>. Crous PW, Costa MM, Kandemir H, et al. 2023. Fungal Planet description 1551 – 1613. <br>DOI: https://doi.org/10.3767/persoonia.2023.51.08Maximum likelihood (ML) tree in Nexus format obtained from the combination of 40 ITS + LSU sequences, showing in the branches the ML bootstrap support (ML-bs) calculated with IQ-TREE v. 2.1.3 (Nguyen et al. 2015), performing 300 standard bootstrap replicates, and applying the models selected with ModelFinder for each of the partitions used: TPM2+F+G4 for ITS, and TN+F+I for LSU.Bayesian inference (BI) tree in Nexus format obtained from the combination of 40 ITS + LSU sequences, showing in the branches the Bayesian posterior probability (BPP) calculated with MrBayes v. 3.2 (Ronquist et al. 2012), performing 1000000 generations, and applying the models selected with ModelFinder (S. Kalyaanamoorthy, B.Q. Minh, T.K.F. Wong, A. von Haeseler, L.S. Jermiin<b> </b>(2017) ModelFinder: Fast model selection for accurate phylogenetic estimates. <i>Nat. Methods</i>, 14:587-589) for each of the partitions used: TPM2+F+G4 for ITS, and TN+F+I for LSU.Nexus format alignment of 30 taxa of <i>Amanita</i> section <i>Vaginatae</i>, Clade 5 obtained with Mafft online, L-ins-i strategy (Katoh, Rozewicki, Yamada 2019 (Briefings in Bioinformatics 20:1160-1166). MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization), and manually adjusted with Bioedit 7.2.5 (Hall, T.A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids. Symp. Ser. 41:95-98).
DOI: 10.5281/zenodo.10449505
title: Esposende project: dataset.

description: Dataset with the data from the first experiment of the "Esposende Project" (November 2023) for the development of a semi-automatic analyser for verifying compliance with the W3C DWBP in datasets deposited in the Zenodo repository. The file contains the doi of the analysed dataset and the result of the verification of each of the 35 good practices. Dataset con los datos del primer experimento del "Proyecto Esposende" (noviembre de 2023) para el desarrollo de un analizador semiautomático de verificación del cumplimiento de las DWBP del W3C en conjuntos de datos depositados en el repositorio Ze. En el fichero aparece el doi del dataset analizado y el resultado de la verificación de cada una de las 35 buenas prácticas.
DOI: 10.5281/zenodo.10449506
title: Esposende project: dataset.

description: Dataset with the data from the first experiment of the "Esposende Project" (November 2023) for the development of a semi-automatic analyser for verifying compliance with the W3C DWBP in datasets deposited in the Zenodo repository. The file contains the doi of the analysed dataset and the result of the verification of each of the 35 good practices. Dataset con los datos del primer experimento del "Proyecto Esposende" (noviembre de 2023) para el desarrollo de un analizador semiautomático de verificación del cumplimiento de las DWBP del W3C en conjuntos de datos depositados en el repositorio Ze. En el fichero aparece el doi del dataset analizado y el resultado de la verificación de cada una de las 35 buenas prácticas.