cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3568812.v1
title: Appendix F. Table summarizing the characteristics of fruits and seeds of species modeled in SORTIE/NZ.

description: Table summarizing the characteristics of fruits and seeds of species modeled in SORTIE/NZ.
DOI: 10.6084/m9.figshare.3568809
title: Appendix G. Chemical characteristics of the alluvial and marine terrace soils used to pot seedlings collected from the study area for growing in glasshouse conditions before planting into deer exclosures.

description: Chemical characteristics of the alluvial and marine terrace soils used to pot seedlings collected from the study area for growing in glasshouse conditions before planting into deer exclosures.
DOI: 10.6084/m9.figshare.3568809.v1
title: Appendix G. Chemical characteristics of the alluvial and marine terrace soils used to pot seedlings collected from the study area for growing in glasshouse conditions before planting into deer exclosures.

description: Chemical characteristics of the alluvial and marine terrace soils used to pot seedlings collected from the study area for growing in glasshouse conditions before planting into deer exclosures.
DOI: 10.6084/m9.figshare.3568803
title: Appendix H. Tables and figures describing the results of our field study investigating rodent predation on seeds of five tree species as a function of the relative basal area of trees in alluvial and marine terrace forests.

description: Tables and figures describing the results of our field study investigating rodent predation on seeds of five tree species as a function of the relative basal area of trees in alluvial and marine terrace forests.
DOI: 10.6084/m9.figshare.3568803.v1
title: Appendix H. Tables and figures describing the results of our field study investigating rodent predation on seeds of five tree species as a function of the relative basal area of trees in alluvial and marine terrace forests.

description: Tables and figures describing the results of our field study investigating rodent predation on seeds of five tree species as a function of the relative basal area of trees in alluvial and marine terrace forests.
DOI: 10.6084/m9.figshare.3568797
title: Appendix I. Tables and figures summarizing the results of our field study investigating the effects of the presence and absence of deer on seedling growth and mortality rates in alluvial and marine terrace forests.

description: Tables and figures summarizing the results of our field study investigating the effects of the presence and absence of deer on seedling growth and mortality rates in alluvial and marine terrace forests.
DOI: 10.6084/m9.figshare.3568797.v1
title: Appendix I. Tables and figures summarizing the results of our field study investigating the effects of the presence and absence of deer on seedling growth and mortality rates in alluvial and marine terrace forests.

description: Tables and figures summarizing the results of our field study investigating the effects of the presence and absence of deer on seedling growth and mortality rates in alluvial and marine terrace forests.
DOI: 10.6084/m9.figshare.3568794
title: Appendix J. Schefflera digitata seedlings planted in the alluvial terrace forest.

description: Schefflera digitata seedlings planted in the alluvial terrace forest.
DOI: 10.6084/m9.figshare.3568794.v1
title: Appendix J. Schefflera digitata seedlings planted in the alluvial terrace forest.

description: Schefflera digitata seedlings planted in the alluvial terrace forest.
DOI: 10.6084/m9.figshare.3568791
title: Appendix K. Figures showing predicted 500-year trends in total adult basal area, total sapling density, and total seedling density in four herbivory scenarios for the alluvial and marine terrace forests.

description: Figures showing predicted 500-year trends in total adult basal area, total sapling density, and total seedling density in four herbivory scenarios for the alluvial and marine terrace forests.
DOI: 10.6084/m9.figshare.3568791.v1
title: Appendix K. Figures showing predicted 500-year trends in total adult basal area, total sapling density, and total seedling density in four herbivory scenarios for the alluvial and marine terrace forests.

description: Figures showing predicted 500-year trends in total adult basal area, total sapling density, and total seedling density in four herbivory scenarios for the alluvial and marine terrace forests.
DOI: 10.6084/m9.figshare.3568785
title: Appendix L. Figures showing predicted 500-year trends in total adult basal area, total sapling density, and total seedling density of conifers and angiosperms in four herbivory scenarios for the alluvial and marine terrace forests.

description: Figures showing predicted 500-year trends in total adult basal area, total sapling density, and total seedling density of conifers and angiosperms in four herbivory scenarios for the alluvial and marine terrace forests.
DOI: 10.6084/m9.figshare.3568785.v1
title: Appendix L. Figures showing predicted 500-year trends in total adult basal area, total sapling density, and total seedling density of conifers and angiosperms in four herbivory scenarios for the alluvial and marine terrace forests.

description: Figures showing predicted 500-year trends in total adult basal area, total sapling density, and total seedling density of conifers and angiosperms in four herbivory scenarios for the alluvial and marine terrace forests.
DOI: 10.6084/m9.figshare.3568782
title: Appendix M. Figures showing predicted 500-year trends in adult basal area, sapling density, and seedling density for each of the 15 species in the four alluvial terrace forest herbivory scenarios.

description: Figures showing predicted 500-year trends in adult basal area, sapling density, and seedling density for each of the 15 species in the four alluvial terrace forest herbivory scenarios.
DOI: 10.6084/m9.figshare.3568782.v1
title: Appendix M. Figures showing predicted 500-year trends in adult basal area, sapling density, and seedling density for each of the 15 species in the four alluvial terrace forest herbivory scenarios.

description: Figures showing predicted 500-year trends in adult basal area, sapling density, and seedling density for each of the 15 species in the four alluvial terrace forest herbivory scenarios.
DOI: 10.6084/m9.figshare.3568779
title: Appendix N. Figures showing predicted 500-year trends in adult basal area, sapling density, and seedling density for each of the seven species in the four marine terrace forest herbivory scenarios.

description: Figures showing predicted 500-year trends in adult basal area, sapling density, and seedling density for each of the seven species in the four marine terrace forest herbivory scenarios.
DOI: 10.6084/m9.figshare.3568779.v1
title: Appendix N. Figures showing predicted 500-year trends in adult basal area, sapling density, and seedling density for each of the seven species in the four marine terrace forest herbivory scenarios.

description: Figures showing predicted 500-year trends in adult basal area, sapling density, and seedling density for each of the seven species in the four marine terrace forest herbivory scenarios.
DOI: 10.6084/m9.figshare.3568776
title: Appendix O. Evaluation of model predictions.

description: Evaluation of model predictions.
DOI: 10.6084/m9.figshare.3568776.v1
title: Appendix O. Evaluation of model predictions.

description: Evaluation of model predictions.
DOI: 10.6084/m9.figshare.3568773
title: Supplement 1. SORTIE/NZ alluvial and marine terrace forest model parameter files used in our simulations.

description: File List alluvial_deer_rodents.xml (MD5: fec73f5cbe1cf1fbd587dc29cf9c42fd) alluvial_nodeer_rodents.xml (MD5: 0435338fc8998aca9b9322bfea345533) alluvial_deer_norodents.xml (MD5: d8bff34169c559dede221511169a3798) alluvial_nodeer_norodents.xml (MD5: d3b24db3871cf4ade0e94b6c3c25bb3b) marine_deer_rodents.xml (MD5: 8f5df79facd3ed25085b47afa33080de) marine_nodeer_rodents.xml (MD5: 56108f6e203abab9e508e0d635ae6fd6) marine_deer_norodents.xml (MD5: 6ce70e3af822e742c2a66331bf6997a7) marine_nodeer_norodents.xml (MD5: 08a7c7506efbc9ab8c8e70d7786742dd) Description The eight parameter files used in our simulations. The parameter files must be used with SORTIE-ND Version 6.11 or greater, which is available for download from http://www.sortie-nd.org/. The source code, programmer's guides, user guides, and documentation of all sub-models are all available online (http://www.sortie-nd.org/). Each of the four parameter files for the alluvial or marine terrace forest has the same tree map for the alluvial or marine terrace forest associated with it. You must have Java Runtime Environment installed. <br> Once SORTE is installed you need to go 'File - Open File' and browse to the parameter file you want to load. Once this is done you need to go 'Edit Parameters' and then check the 'All' box at the bottom, this will allow you to browse all of the parameters. If you want to run the simulation then you need to 'Edit - Output Options' and change both the summary and output file destinations (and possibly their names) to a local folder.
DOI: 10.6084/m9.figshare.3568773.v1
title: Supplement 1. SORTIE/NZ alluvial and marine terrace forest model parameter files used in our simulations.

description: File List alluvial_deer_rodents.xml (MD5: fec73f5cbe1cf1fbd587dc29cf9c42fd) alluvial_nodeer_rodents.xml (MD5: 0435338fc8998aca9b9322bfea345533) alluvial_deer_norodents.xml (MD5: d8bff34169c559dede221511169a3798) alluvial_nodeer_norodents.xml (MD5: d3b24db3871cf4ade0e94b6c3c25bb3b) marine_deer_rodents.xml (MD5: 8f5df79facd3ed25085b47afa33080de) marine_nodeer_rodents.xml (MD5: 56108f6e203abab9e508e0d635ae6fd6) marine_deer_norodents.xml (MD5: 6ce70e3af822e742c2a66331bf6997a7) marine_nodeer_norodents.xml (MD5: 08a7c7506efbc9ab8c8e70d7786742dd) Description The eight parameter files used in our simulations. The parameter files must be used with SORTIE-ND Version 6.11 or greater, which is available for download from http://www.sortie-nd.org/. The source code, programmer's guides, user guides, and documentation of all sub-models are all available online (http://www.sortie-nd.org/). Each of the four parameter files for the alluvial or marine terrace forest has the same tree map for the alluvial or marine terrace forest associated with it. You must have Java Runtime Environment installed. <br> Once SORTE is installed you need to go 'File - Open File' and browse to the parameter file you want to load. Once this is done you need to go 'Edit Parameters' and then check the 'All' box at the bottom, this will allow you to browse all of the parameters. If you want to run the simulation then you need to 'Edit - Output Options' and change both the summary and output file destinations (and possibly their names) to a local folder.
DOI: 10.6084/m9.figshare.3568770
title: Appendix A. Stoichiometry across microbes and major biomes.

description: Stoichiometry across microbes and major biomes.
DOI: 10.6084/m9.figshare.3568770.v1
title: Appendix A. Stoichiometry across microbes and major biomes.

description: Stoichiometry across microbes and major biomes.
DOI: 10.6084/m9.figshare.3568767
title: Appendix A. Methodological details for bioenergetics models.

description: Methodological details for bioenergetics models.
DOI: 10.6084/m9.figshare.3568767.v1
title: Appendix A. Methodological details for bioenergetics models.

description: Methodological details for bioenergetics models.
DOI: 10.6084/m9.figshare.3568764
title: Appendix B. Details of field-based excretion methods.

description: Details of field-based excretion methods.
DOI: 10.6084/m9.figshare.3568764.v1
title: Appendix B. Details of field-based excretion methods.

description: Details of field-based excretion methods.
DOI: 10.6084/m9.figshare.3568761
title: Appendix C. Methodological details for hierarchical models.

description: Methodological details for hierarchical models.
DOI: 10.6084/m9.figshare.3568761.v1
title: Appendix C. Methodological details for hierarchical models.

description: Methodological details for hierarchical models.
DOI: 10.6084/m9.figshare.3568758
title: Appendix D. Untransformed data plots of richness, species diversity, and functional group diversity against all ecosystem processes.

description: Untransformed data plots of richness, species diversity, and functional group diversity against all ecosystem processes.
DOI: 10.6084/m9.figshare.3568755
title: Appendix A. Supplementary results: Age-class specific fish length ~ otolith radius relationships.

description: Supplementary results: Age-class specific fish length ~ otolith radius relationships.
DOI: 10.18462/iir.rankine.2020.1184
title: Parametric analysis of novel self-water supply ORC power system for hot spring thermal energy conversion.
DOI: 10.6084/m9.figshare.3568755.v1
title: Appendix A. Supplementary results: Age-class specific fish length ~ otolith radius relationships.

description: Supplementary results: Age-class specific fish length ~ otolith radius relationships.
DOI: 10.6084/m9.figshare.3568752
title: Appendix B. Supplementary methods and results: Estimation of spatially resolved annual bottom temperature from SynTS and the HadISST1 modelled products.

description: Supplementary methods and results: Estimation of spatially resolved annual bottom temperature from SynTS and the HadISST1 modelled products.
DOI: 10.6084/m9.figshare.3568752.v1
title: Appendix B. Supplementary methods and results: Estimation of spatially resolved annual bottom temperature from SynTS and the HadISST1 modelled products.

description: Supplementary methods and results: Estimation of spatially resolved annual bottom temperature from SynTS and the HadISST1 modelled products.
DOI: 10.6084/m9.figshare.3568749
title: Appendix C. Supplementary methods and results: Calculation of relative abundance indices using fishery-derived CPUE estimates.

description: Supplementary methods and results: Calculation of relative abundance indices using fishery-derived CPUE estimates.
DOI: 10.6084/m9.figshare.3568749.v1
title: Appendix C. Supplementary methods and results: Calculation of relative abundance indices using fishery-derived CPUE estimates.

description: Supplementary methods and results: Calculation of relative abundance indices using fishery-derived CPUE estimates.
DOI: 10.6084/m9.figshare.3568746
title: Appendix D. Intraclass correlation coefficient (ICC) and R2 equations for mixed models.

description: Intraclass correlation coefficient (ICC) and R2 equations for mixed models.
DOI: 10.6084/m9.figshare.3568746.v1
title: Appendix D. Intraclass correlation coefficient (ICC) and R2 equations for mixed models.

description: Intraclass correlation coefficient (ICC) and R2 equations for mixed models.
DOI: 10.6084/m9.figshare.3568743
title: Appendix E. Within-area supplementary results: result descriptions, model selection tables and within-area intrinsic effect plots.

description: Within-area supplementary results: result descriptions, model selection tables and within-area intrinsic effect plots.
DOI: 10.34808/er4m-8032
title: Other specified diseases of liver - Female, 35 - Tissue image [11020630022698711]

description: This is the histopathological image of LIVER AND INTRAHEPATIC BILE DUCTS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 35Clinical description: History of melanoma. Tumor of liver.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XI - Diseases of the digestive systemDiagnosis: Other specified diseases of liverResult of the histopathological examination: Focal nodular hyperplasia: CK 19 + in bile ductules, CEA -, S100-, Melan A-, AFP-, Ki-67 1%.Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: LIVER AND INTRAHEPATIC BILE DUCTSTissue: LiverType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/341p-4v46
title: Squamous cell carcinoma, nonkeratinizing, NOS - Female, 72 - Tissue image [10110730048211981]

description: This is the histopathological image of NASOPHARYNX tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 72Clinical description: Tumor of nasopharynx.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: SQUAMOUS CELL NEOPLASMSDiagnosis: Squamous cell carcinoma, nonkeratinizing, NOSResult of the histopathological examination: Nasopharyngeal carcinoma, non-keratinizing type. (CK5/6+, CKAE!/AE3+, EBVLMP1+, Ki-67 >80%).Sample:Material: FFPECollecting method: Surgical biopsyTopography: LIP, ORAL CAVITY AND PHARYNXOrgan: NASOPHARYNXTissue: Nasopharynx, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/28bv1v/e6dy4x
title: FMW Antrodiella pallescens (Pilát) Niemelä & Miettinen M-4422 (2).JPG

description: :unav
DOI: 10.34808/mb4r-j537
title: Other noninflammatory disorders of uterus, except cervix - Female, 46 - Tissue image [3130630016426051]

description: This is the histopathological image of CORPUS UTERI tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: VS200 Olympus slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 46Clinical description: Leyomyomas of the uterus.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter XIV - Diseases of the genitourinary systemDiagnosis: Other noninflammatory disorders of uterus, except cervixResult of the histopathological examination: Endometrial atrophy.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: CORPUS UTERITissue: Endometrial glandType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: VS200 OlympusLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/8j8c-a939
title: Ganglioneuroblastoma - Male, 3 - Tissue image [5240730032352161]

description: This is the histopathological image of HEART, MEDIASTINUM, AND PLEURA tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 3Clinical description: Mediastinal tumor.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: NEUROEPITHELIOMATOUS NEOPLASMSDiagnosis: GanglioneuroblastomaResult of the histopathological examination: Ganglioneuroblastoma intermixed.
There is an advanced maturation of the neuroblastic component within the tumor.Sample:Material: FFPECollecting method: Surgical specimenTopography: RESPIRATORY SYSTEM AND INTRATORACIC ORGANSOrgan: HEART, MEDIASTINUM, AND PLEURATissue: Posterior mediastinumType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/28bv1v/nsd7q8
title: FMW Antrodiella pallescens (Pilát) Niemelä & Miettinen M-4422.JPG

description: :unav
DOI: 10.48370/ofd/bhkvby
title: Myodes glareolus - 11397, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1955-07-23, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/fh2j-dv13
title: Hepatocellular carcinoma, NOS - Male, 70 - Tissue image [9200729571533661]

description: This is the histopathological image of LIVER AND INTRAHEPATIC BILE DUCTS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 70Clinical description: 7,0 x 5,0 x 6,5 cm tumor of liver.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Hepatocellular carcinoma, NOSResult of the histopathological examination: Hepatocellular carcinoma (HCC).Sample:Material: FFPECollecting method: Surgical specimenTopography: DIGESTIVE ORGANSOrgan: LIVER AND INTRAHEPATIC BILE DUCTSTissue: LiverType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/28bv1v
title: Antrodiella pallescens (Pilát) Niemelä Miettinen, 4422

description: Antrodiella pallescens
DOI: 10.34808/b61f-h219
title: Composite Hodgkin and non-Hodgkin lymphoma - Male, 65 - Tissue image [8160730027018531]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 65Clinical description: No clinical data.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: MALIGNANT LYMPHOMAS NOS OR DIFFUSEDiagnosis: Composite Hodgkin and non-Hodgkin lymphomaResult of the histopathological examination: Composite Hodgkin and non-Hodgkin lymphoma (CLL-B/SLL-B). 
CLL-B/SLL-B cells: CD20+, CD5+, BOB1+, Pax5+, CD23 singular cells +, Ki-67 5-10%.
HRS cells: CD30+, CD15+, Pax5 weak +, MUM1+, Ki-67+, CD20-, CD3-, CD5-, BCL6-, BOB1-, CD57-, CD23-.Sample:Material: FFPECollecting method: Surgical specimenTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Lymph node, NOSType of staining: positive/IHCStaining: Not applicableAntibody: BOB1Technology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.48370/ofd/lc2zbp
title: Myodes glareolus - 104151, Zoological collection of the Mammal Research Institute, PAS

description: Myodes glareolus (Bank vole) from Zoological collection of the Mammal Research Institute, PAS. Collected 1971-12-07, in: Białowieża National Park, Poland. Material type:
DOI: 10.34808/ykqv-5e65
title: Neoplasm, malignant - Male, 80 - Tissue image [12160630012628251]

description: This is the histopathological image of BRONCHUS AND LUNG tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 80Clinical description: Tumor of the lungGender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: NEOPLASMS, NOSDiagnosis: Neoplasm, malignantResult of the histopathological examination: Squamous cell carcinoma of the lungSample:Material: FFPECollecting method: Surgical specimenTopography: RESPIRATORY SYSTEM AND INTRATORACIC ORGANSOrgan: BRONCHUS AND LUNGTissue: Lung, NOSType of staining: positive/HEStaining: Hematoxylin & eosinAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.6084/m9.figshare.19425983
title: Bifidobacterium mizhiense sp. nov. , isolated from the gut of honeybee (Apis mellifera)

description: Supplementary material for 'Bifidobacterium mizhiense sp. nov., isolated from the gut of honeybee (Apis mellifera)'<br>