cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21233/yhk7-j949
title: Mitsushima-Machi Nobu ostracode surface sample dataset

description: Raw data for the Mitsushima-Machi Nobu ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.57745/saq7uh
title: foodon_sem_extended.owl

description: Extended version including manual annotations about 10 food products added 05/08/2022 for OAEI 2022
DOI: 10.57745/xp7g4r
title: foodon_sem_extended.owl

description: Extended version for OAEI 2023
DOI: 10.21233/7fdm-z952
title: Tourbiere de l’Aeroport testate amoebae surface sample dataset

description: Raw data for the Tourbiere de l’Aeroport testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.10843514
title: Supporting dataset for manuscript "Estimating the microarthropod diversity in cropping systems by comparing ecological indices across Europe" by Bigiotti et al. 2025

description: This dataset contains counts of mesofauna individuals classified as Biological Forms (BF). It represent the raw data used for all indices calculation in the manuscript entitled "Microarthropod communities' diversity for soil health assessment: comparing several ecological indices across Europe" by authors Gaia Bigiotti, Francesco Vitali, Stefano Mocali, Giovanni L’Abate, Eligio Malusà, Dawid Kozacki, Irena Bertoncelj, Morgane Ourry, Massimo Pugliese, Heinrich Maisel, Expedito Olimi, Maria Grazia Tommasini, Carlo Jacomini, and Lorenzo D’Avino.
DOI: 10.5281/zenodo.10843513
title: Supporting dataset for manuscript "Estimating the microarthropod diversity in cropping systems by comparing ecological indices across Europe" by Bigiotti et al. 2025

description: This dataset contains counts of mesofauna individuals classified as Biological Forms (BF). It represent the raw data used for all indices calculation in the manuscript entitled "Microarthropod communities' diversity for soil health assessment: comparing several ecological indices across Europe" by authors Gaia Bigiotti, Francesco Vitali, Stefano Mocali, Giovanni L’Abate, Eligio Malusà, Dawid Kozacki, Irena Bertoncelj, Morgane Ourry, Massimo Pugliese, Heinrich Maisel, Expedito Olimi, Maria Grazia Tommasini, Carlo Jacomini, and Lorenzo D’Avino.
DOI: 10.7274/28786148
title: Multigraded and Symmetric Syzygies

description: This dissertation studies the resolutions of and over quotients of polynomial rings in both multigraded and symmetric settings. The first main results deal with multiplicative structures on the multigraded Koszul homology a monomial ring, with applications to resolutions over those rings in the general and symmetric setting. We then describe the syzygies of the ideal of permanents of a 2 by n generic matrix in terms of multigrading and symmetric group representations.
In Chapter 2, we study special multigraded cycles of a Koszul complex called monomial cycles. Let S be a polynomial ring over a field, R be a quotient of S by a monomial ideal, and K be the Koszul complex of the variables over S. We determine when a cycle in K tensored with R with a single monomial coefficient corresponds to a non-zero homology class. We prove that such a cycle is a boundary if and only if the coefficient is contained in an ideal we introduce called the boundary ideal. This gives insight as to when the natural multiplication structure on Koszul homology vanishes, which has applications to resolutions over R. Our main application is a classification of Golod monomial ideals in four or fewer variables.
In Chapter 3, we determine a class of monomial ideals for which the Koszul homology groups exhibit a basis consisting entirely of monomial cycles. This class includes the well-known case of the stable monomial ideals.
In Chapter 4, we apply the results of Chapter 2 to the symmetric monomial ideals. We determine when products of monomial cycles vanish in terms of the generating partitions of the ideal. 
In Chapter 5, we describe the multigraded symmetric syzygies of the ideal of 2 by 2 permanents of a generic 2 by n matrix.
DOI: 10.7274/28786148.v1
title: Multigraded and Symmetric Syzygies

description: This dissertation studies the resolutions of and over quotients of polynomial rings in both multigraded and symmetric settings. The first main results deal with multiplicative structures on the multigraded Koszul homology a monomial ring, with applications to resolutions over those rings in the general and symmetric setting. We then describe the syzygies of the ideal of permanents of a 2 by n generic matrix in terms of multigrading and symmetric group representations.
In Chapter 2, we study special multigraded cycles of a Koszul complex called monomial cycles. Let S be a polynomial ring over a field, R be a quotient of S by a monomial ideal, and K be the Koszul complex of the variables over S. We determine when a cycle in K tensored with R with a single monomial coefficient corresponds to a non-zero homology class. We prove that such a cycle is a boundary if and only if the coefficient is contained in an ideal we introduce called the boundary ideal. This gives insight as to when the natural multiplication structure on Koszul homology vanishes, which has applications to resolutions over R. Our main application is a classification of Golod monomial ideals in four or fewer variables.
In Chapter 3, we determine a class of monomial ideals for which the Koszul homology groups exhibit a basis consisting entirely of monomial cycles. This class includes the well-known case of the stable monomial ideals.
In Chapter 4, we apply the results of Chapter 2 to the symmetric monomial ideals. We determine when products of monomial cycles vanish in terms of the generating partitions of the ideal. 
In Chapter 5, we describe the multigraded symmetric syzygies of the ideal of 2 by 2 permanents of a generic 2 by n matrix.
DOI: 10.21233/c8h6-5559
title: Bark Lake water chemistry dataset

description: Raw data for the Bark Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/tv8v-vh70
title: LDDsite4869 water chemistry dataset

description: Raw data for the LDDsite4869 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.nb4jyg
title: Occurrence Download

description: A dataset containing 63133 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (EOD – eBird Observation Dataset, DATAVES)",
 "GadmGid is one of (COL.14.27_2, COL.14.28_2, COL.14.18_2, COL.14.13_2)",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 63133 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026570-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/dfw2-9d94
title: Frog Pond pollen surface sample dataset

description: Raw data for the Frog Pond pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/dnbr-qk59
title: Allen site [25FT50] macroinvertebrate dataset

description: Raw data for the Allen site [25FT50] macroinvertebrate dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/94ex-9803
title: Rezina marsh pollen dataset

description: Raw data for the Rezina marsh pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17863/cam.111974
title: Research Data supporting "Large-Scale Tight-Binding Hamiltonians of the Eightfold Quasicrystalline Potential (8QC)"

description: This dataset contains the Tight-binding (TB) Hamiltonians describing the lowest band of the eightfold quasicrystalline potential. The TB Hamiltonians were constructed using localised Wannier functions generated using an extension of the methods described in [1], whereby the finite-difference methods was replaced with the sinc discrete variable representation to alleviate the memory usage of the Wannier functions and increase the maximum system size to around 12000 sites. The TB Hamiltonians describe a circular patch of diameter 70 λ. The lattice depths were generated in steps of 0.125 Er. The parameters used for this dataset were a real-space grid spacing δx = 0.1λ, and a cutoff radius for generating the Wannier functions of R = 4λ. Please refer to Readme file for more details of file collection and organisation. [1] E. Gottlob and U. Schneider, Hubbard models for quasicrystalline potentials, Phys. Rev. B 107, 144202.
DOI: 10.17863/cam.114618
title: Research data supporting "Design and evaluation of an auxetic biaxial substrate straining device for tissue engineering applications"

description: Dataset collected for the research on designing a auxetic mesh-based biaxial straining device for tissue engineering substrates such as collagen gels. It contains mechanical characterisation of re-entrant honeycomb meshes of different material and geometry and biological cell work on dermal fibroblasts.
DOI: 10.17863/cam.114082.2
title: Dataset for “Direct air capture of CO2 for solar fuels production in flow” - Version 2

description: This V2 dataset is an updated and corrected version of the old V1 dataset (https://doi.org/10.17863/CAM.114082). The dataset contains raw data supporting the article “Direct air capture of CO2 for solar fuels production in flow”. A gas-phase dual bed flow reactor has been developed for the capture and conversion of CO2 from air into synthesis gas using sunlight. The dataset is divided into four key parts: i) CO2 Utilisation: Contains all CO2 photoreduction data, ii) Direct Air Capture: Contains all CO2 capture from air data, iii) Integrated Capture and Utilisation: contains all CO2 capture and photoconversion data, and iv) Material Characterisation: contains BET, PXRD, STEM, EDS, TGA, UV-VIS-IR, and XPS data. For more details about experimental procedure, instrumentation, and data collection, see the manuscript.
DOI: 10.21233/k6n1-d022
title: Beni M'tir pollen dataset

description: Raw data for the Beni M'tir pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/eh67-0909
title: Fawn Creek Bison vertebrate fauna dataset

description: Raw data for the Fawn Creek Bison vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/7hn8-rn21
title: Fosters water chemistry dataset

description: Raw data for the Fosters water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.47hd5a
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.6_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Aliciella sedifolia (Brandegee) J.M.Porter"
 ]
}

 The dataset includes 18 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026584-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6n7qnh
title: Occurrence Download

description: A dataset containing 547 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rosa ×damascena Mill."
 ]
}

 The dataset includes 547 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026583-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/brw3-0v95
title: Manu470 pollen surface sample dataset

description: Raw data for the Manu470 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.15389404
title: Landscape Structure, Climate Variability, and Soil Quality Shape Crop Biomass Patterns in Agricultural Ecosystems of Bavaria

description: Description:This dataset supports the study "Landscape Structure, Climate Variability, and Soil Quality Shape Crop Biomass Patterns in Agricultural Ecosystems of Bavaria." It includes spatial and spatio-temporal predictor data and biomass estimates for winter wheat (WW) and oilseed rape (OSR) across Bavaria, Germany, from 2001 to 2019. All data are aggregated at a 5 km² hexagon level.

Contents include:





Predictor shapefiles for WW and OSR (climate, soil, topography, landscape metrics)




Biomass maps derived from LUE and RF models




SHapley values (SHAP) and Partial Dependence Plot (PDP) outputs




Hexagon shapefile (Hexagrid_5_LAEA)




District yield shapefile (District_Yields_LfStat)




README with full metadata and variable descriptions



Note:IACS field boundary data used to extract crop-specific information are not included due to data-sharing restrictions.
DOI: 10.5281/zenodo.15389405
title: Landscape Structure, Climate Variability, and Soil Quality Shape Crop Biomass Patterns in Agricultural Ecosystems of Bavaria

description: Description:This dataset supports the study "Landscape Structure, Climate Variability, and Soil Quality Shape Crop Biomass Patterns in Agricultural Ecosystems of Bavaria." It includes spatial and spatio-temporal predictor data and biomass estimates for winter wheat (WW) and oilseed rape (OSR) across Bavaria, Germany, from 2001 to 2019. All data are aggregated at a 5 km² hexagon level.

Contents include:





Predictor shapefiles for WW and OSR (climate, soil, topography, landscape metrics)




Biomass maps derived from LUE and RF models




SHapley values (SHAP) and Partial Dependence Plot (PDP) outputs




Hexagon shapefile (Hexagrid_5_LAEA)




District yield shapefile (District_Yields_LfStat)




README with full metadata and variable descriptions



Note:IACS field boundary data used to extract crop-specific information are not included due to data-sharing restrictions.
DOI: 10.6084/m9.figshare.24986299
title: Characteristics of the gut microbiome of Swiss elite athletes with a spinal cord injury: An exploratory study

description: To illustrate and explore associations between the gut microbiome and spinal cord injury (SCI) characteristics, physical training, dietary intake, body composition, and blood biomarkers of elite Swiss athletes. Baseline data analysis of athletes with SCI who participated in a pilot trial (NCT04659408) in the Swiss Paraplegic Center, Nottwil, Switzerland. Elite athletes, five males, and six females, with SCI who competed internationally. We conducted a differential abundance analysis and measured the alpha and beta diversity of the gut microbiome. The athletes’ median age was 34.5 years. Six had traumatic SCI and five had a spina bifida. The athletes competed in para-cycling (5), wheelchair athletics (3), and wheelchair tennis (3). A higher duration of training per week was positively associated with <i>Akkermansia</i> and <i>Akkermansiaceae</i> but negatively associated with <i>Prevotellaceae</i>. <i>Muribaculaceae</i> was negatively associated with the average number of trainings per week. Waist circumference is negatively associated with <i>Butyricimonas</i>. Significant differences in the alpha diversity were found with sex, gastrointestinal quality of life index (GIQLI) scores, total caloric intake, total fat intake, total carbohydrate intake, and high-sensitivity C-reactive protein (hs-CRP). Beta diversity differences were found with impairment of the sympathetic nervous system of the gut at the genus level and HbA1c at the family level. This study provides insight into the gut microbiome of athletes with SCI. Our results were similar to those found in athletes without SCI. Further replication is needed to confirm the relationships of organisms observed in the gut of athletes with SCI.
DOI: 10.6084/m9.figshare.24986299.v1
title: Characteristics of the gut microbiome of Swiss elite athletes with a spinal cord injury: An exploratory study

description: To illustrate and explore associations between the gut microbiome and spinal cord injury (SCI) characteristics, physical training, dietary intake, body composition, and blood biomarkers of elite Swiss athletes. Baseline data analysis of athletes with SCI who participated in a pilot trial (NCT04659408) in the Swiss Paraplegic Center, Nottwil, Switzerland. Elite athletes, five males, and six females, with SCI who competed internationally. We conducted a differential abundance analysis and measured the alpha and beta diversity of the gut microbiome. The athletes’ median age was 34.5 years. Six had traumatic SCI and five had a spina bifida. The athletes competed in para-cycling (5), wheelchair athletics (3), and wheelchair tennis (3). A higher duration of training per week was positively associated with <i>Akkermansia</i> and <i>Akkermansiaceae</i> but negatively associated with <i>Prevotellaceae</i>. <i>Muribaculaceae</i> was negatively associated with the average number of trainings per week. Waist circumference is negatively associated with <i>Butyricimonas</i>. Significant differences in the alpha diversity were found with sex, gastrointestinal quality of life index (GIQLI) scores, total caloric intake, total fat intake, total carbohydrate intake, and high-sensitivity C-reactive protein (hs-CRP). Beta diversity differences were found with impairment of the sympathetic nervous system of the gut at the genus level and HbA1c at the family level. This study provides insight into the gut microbiome of athletes with SCI. Our results were similar to those found in athletes without SCI. Further replication is needed to confirm the relationships of organisms observed in the gut of athletes with SCI.
DOI: 10.6084/m9.figshare.27868128
title: Implementation and clinical impact of an interdisciplinary tool to promote skin integrity after flap surgery in Veterans with spinal cord injury

description: Pressure injury (PrI) recurrence is common among persons with spinal cord injury and disorders (SCI/D) who undergo reconstructive flap surgery for pelvic stage 4 PrI (S4PrI). This paper describes the development and implementation of the Minneapolis Spinal Cord Optimization, Rehabilitation and Empowerment (SCORE), a preoperative interdisciplinary tool for risk assessment and mitigation, and reports its effect on the one-year flap failure rate (significant breakdown). Retrospective review. Minneapolis Veterans Affairs Health Care System (MVAHCS) SCI/D Center, a tertiary care center. 141 Veterans with SCI/D and pelvic S4PrI underwent 204 interdisciplinary assessments for flap surgery. The Minneapolis SCORE was developed by the MVAHCS SCI/D Center and first implemented in 2012. The eight domains of the tool and continuous improvements in tool implementation for risk assessment and mitigation are described. Per-year incidence rate of flap failures within one year of surgery from 2009 to 2019. 48.3% (28/58) of S4PrI assessments during 2009–2011 (pre-SCORE) led to flap surgery the same year, increasing to 59.6% (87/146) of assessments after SCORE implementation during 2012–2019. The one-year flap failure rate abruptly decreased from 40.5% (15/37) of the 2009–2012 surgeries to 7.7% (6/78) of the 2013–2019 surgeries (P &lt; .0001). Characteristics of patients by time period, operative status, and flap outcome are presented. After an initial learning curve in tool implementation and subsequent tool refinement, the use of the Minneapolis SCORE before flap surgeries was associated with improved flap integrity at one year. Successful use of the tool requires collaborative problem-solving between the patient and interdisciplinary team.
DOI: 10.6084/m9.figshare.27868128.v1
title: Implementation and clinical impact of an interdisciplinary tool to promote skin integrity after flap surgery in Veterans with spinal cord injury

description: Pressure injury (PrI) recurrence is common among persons with spinal cord injury and disorders (SCI/D) who undergo reconstructive flap surgery for pelvic stage 4 PrI (S4PrI). This paper describes the development and implementation of the Minneapolis Spinal Cord Optimization, Rehabilitation and Empowerment (SCORE), a preoperative interdisciplinary tool for risk assessment and mitigation, and reports its effect on the one-year flap failure rate (significant breakdown). Retrospective review. Minneapolis Veterans Affairs Health Care System (MVAHCS) SCI/D Center, a tertiary care center. 141 Veterans with SCI/D and pelvic S4PrI underwent 204 interdisciplinary assessments for flap surgery. The Minneapolis SCORE was developed by the MVAHCS SCI/D Center and first implemented in 2012. The eight domains of the tool and continuous improvements in tool implementation for risk assessment and mitigation are described. Per-year incidence rate of flap failures within one year of surgery from 2009 to 2019. 48.3% (28/58) of S4PrI assessments during 2009–2011 (pre-SCORE) led to flap surgery the same year, increasing to 59.6% (87/146) of assessments after SCORE implementation during 2012–2019. The one-year flap failure rate abruptly decreased from 40.5% (15/37) of the 2009–2012 surgeries to 7.7% (6/78) of the 2013–2019 surgeries (P &lt; .0001). Characteristics of patients by time period, operative status, and flap outcome are presented. After an initial learning curve in tool implementation and subsequent tool refinement, the use of the Minneapolis SCORE before flap surgeries was associated with improved flap integrity at one year. Successful use of the tool requires collaborative problem-solving between the patient and interdisciplinary team.