cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29039498.v1
title: Deciphering the <i>in silico</i> molecular mechanism of coumestrol activity for uterine fibroids remedy: a promising estrogenic target drug candidate

description: Uterine fibroids (UF) are reproductive conditions that occur as tumours in the womb. It is a gynecological outgrowth of diverse sizes often allied with infertility risks that might require surgery to reduce the complication in the worst-case scenario in women. Recent studies have uncovered that estrogen can induce and facilitate other target pathways’ action on target cells for UF’s pathogenesis, among the targets probed for pharmaceutical intervention. This study screens the interaction effects of 32 phytochemicals from indigenous and adopted potent Chinese plants and herbs; Chamomile, Pomegranate, Red clover, Cinnamomum, and Date palm, against estrogen receptor alpha (ESRα) to serve for anti-UF drug candidates using <i>in silico</i> tools through the molecular mechanisms. The interaction identifies coumestrol as the best-docked candidate (−9.6 kcal/mol) with a correlation to the binding free energy (−30.487 kcal/mol) as compared to the standard drug tamoxifen (−9.3 kcal/mol; −46.928 kcal/mol). The downstream post-docking evaluation reveals coumestrol to have excellent pharmacokinetics, drug-likeness, leadlikeness (no violation), less toxic (LD50; 2991 mg/kg), and highly interactive with ESRα. Coumestrol was top-ranked for ESRα (1QKU) target by PharmMapper among 300 human protein targets, with a z-score of 1.19368. The density functional theory (DFT) and dynamic simulation of 200 ns reveal regions of coumestrol structure and its complex that contribute to the chemical reactivity, stability, flexibility, and compactness of druggability. Ultimately, coumestrol emerged as a potential candidate suitable for anti-UF management, therefore future direction for its application should be on the design and synthesis of new structural derivatives for further <i>in silico</i>, <i>in vitro</i>, and <i>in vivo</i> studies. Common reproduction diseases and genes.
DOI: 10.21233/0jzg-4p55
title: New Island Bone Piles vertebrate fauna dataset

description: Raw data for the New Island Bone Piles vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/x71q-v284
title: Carmichael Site vertebrate fauna dataset

description: Raw data for the Carmichael Site vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/ngfj-c752
title: Bílé Karpaty 39 pollen surface sample dataset

description: Raw data for the Bílé Karpaty 39 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/a840-zy74
title: Boone Lake diatom surface sample dataset

description: Raw data for the Boone Lake diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/kmye-3662
title: Stages Pond ostracode surface sample dataset

description: Raw data for the Stages Pond ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/zzmq-wn52
title: Stadsweg pollen dataset

description: Raw data for the Stadsweg pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/kp06-bj62
title: Gaodi testate amoebae surface sample dataset

description: Raw data for the Gaodi testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.qe9ce7
title: Occurrence Download

description: A dataset containing 1308 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Welwitschiales"
 ]
}

 The dataset includes 1308 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026269-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/a524-5309
title: Isla Santa Cruz André's Cave vertebrate fauna dataset

description: Raw data for the Isla Santa Cruz André's Cave vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.15388031
title: frantzia_pittieri_zanfona_1.fasta.gz
DOI: 10.5281/zenodo.15388032
title: frantzia_pittieri_zanfona_1.fasta.gz
DOI: 10.21233/fd8z-9b93
title: Wickson water chemistry dataset

description: Raw data for the Wickson water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.ug5p72
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Russian Federation",
 "TaxonKey is Castor canadensis Kuhl, 1820"
 ]
}

 The dataset includes 15 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026270-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/d26b-bf06
title: Deering 300, [KTZ-00300] vertebrate fauna dataset

description: Raw data for the Deering 300, [KTZ-00300] vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/t7ng-km84
title: Cheng et al. 2020 Site 180 pollen surface sample dataset

description: Raw data for the Cheng et al. 2020 Site 180 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/kdeq-3t37
title: Grimes water chemistry dataset

description: Raw data for the Grimes water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/9m98-9z62
title: Horseshoe Lake water chemistry dataset

description: Raw data for the Horseshoe Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/637r-7h18
title: La Chaux-des-Breuleux testate amoebae surface sample dataset

description: Raw data for the La Chaux-des-Breuleux testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.26204/data/8
title: Partially Substrateless Microchannels for Direct Monitoring of Interfacial Dynamics in Hydrophobic Surfaces

description: Superhydrophobic and liquid-infused surfaces are the most prominent techniques to achieve drag reduction in microchannels. However, they have speciﬁc drawbacks such as costly fabrication of complex and mechanically sensitive surfaces, surfaces susceptible to lubricant abrasion or involve hazardous chemicals. We present a partially substrateless microchannel whose upper wall features a large no-shear air/water meniscus at atmospheric pressure. On the walls, a self-assembled monolayer of hydrophobic alkyl silane was bonded covalently. Flow experiments reveal a drag reduction of up to 25% although only 4% of the wall fulﬁls the no-shear condition. These experiments demonstrated long-term stability and self-healing properties. Furthermore, White Light Interferometry (WLI) was used for direct monitoring of interfacial dynamics. By optical investigation of the full meniscus topography the contact-free evaluation of the spatially resolved static pressure distribution was possible. Conducted numerical simulations are in good agreement with the experimental ﬁndings and illustrate the drag reduction mechanism.
DOI: 10.15468/dl.9y3nv6
title: Occurrence Download

description: A dataset containing 236585 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Wild bees of Belgium"
 ]
}

 The dataset includes 236585 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026266-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/2558-3258
title: Eagle Creek testate amoebae surface sample dataset

description: Raw data for the Eagle Creek testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17909/j7ft-rz04
title: Creating test DOI in DOI Form

description: Creating test DOI in DOI Form
DOI: 10.21233/ba7j-gm21
title: Lost Valley Reservoir water chemistry dataset

description: Raw data for the Lost Valley Reservoir water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/7y8x-kj52
title: Bílé Karpaty 41 pollen surface sample dataset

description: Raw data for the Bílé Karpaty 41 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/kh1f-r755
title: Markagunt Plateau-09 pollen surface sample dataset

description: Raw data for the Markagunt Plateau-09 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.qd92g3
title: Occurrence Download

description: A dataset containing 613 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Historical biogeographic assessment of intertidal cirriped species along the Iberian coast and north of Morocco by Fischer-Piette"
 ]
}

 The dataset includes 613 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026271-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/5fr8-qx85
title: Ampasambazimba pollen dataset

description: Raw data for the Ampasambazimba pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/69w6-v830
title: Frank Lake water chemistry dataset

description: Raw data for the Frank Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.26204/data/5
title: Dataset and Baseline for an Industrial Robot Identification Benchmark

description: We present an identification benchmark data set for a full robot movement with an KUKA KR300 R2500 ultra SE industrial robot. It is a robot with a nominal payload capacity of 300 kg, a weight of 1120 kg and a reach of 2500mm. It exhibits 12 states accounting for position and velocity for each of the 6 joints. The robot encounters backlash in all joints, pose-dependent inertia, pose-dependent gravitational loads, pose-dependent hydraulic forces, pose- and velocity dependent centripetal and Coriolis forces as well as a nonlinear friction, which is temperature dependent and therefore potentially time varying. We supply the prepared dataset for black-box identification of the forward or the inverse robot dynamics. Additional to the data for black-box modelling, we supply high-frequency raw data and videos of each experiment. A baseline and figures of merit are defined to make results compareable across different identification methods.
DOI: 10.15468/dl.ttc2v8
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "StateProvince is Campania",
 "TaxonKey is one of (Cervus elaphus Linnaeus, 1758, Capreolus capreolus (Linnaeus, 1758), Dama dama (Linnaeus, 1758))"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026273-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/k4vg-jv10
title: Clam Gulch testate amoebae surface sample dataset

description: Raw data for the Clam Gulch testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/qffn-5m35
title: Independence Peatland testate amoebae surface sample dataset

description: Raw data for the Independence Peatland testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.13750341
title: Comparison of Fixed Single Cell RNA-seq Methods to Enable Transcriptome Profiling of Neutrophils in Clinical Samples

description: Monitoring neutrophil gene expression is a powerful tool for understanding disease mechanisms, developing new diagnostics, therapies and optimizing clinical trials. Neutrophils are sensitive to the processing, storage and transportation steps that are involved in clinical sample analysis. This study is the first to evaluate the capabilities of technologies from 10X Genomics, PARSE Biosciences, and HIVE (Honeycomb Biotechnologies) to generate high-quality RNA data from human blood-derived neutrophils. Our comparative analysis shows that all methods produced high quality data, importantly capturing the transcriptomes of neutrophils. 10X FLEX cell populations in particular showed a close concordance with the flow cytometry data. Here, we establish a reliable single-cell RNA sequencing workflow for neutrophils in clinical trials: we offer guidelines on sample collection to preserve RNA quality and demonstrate how each method performs in capturing sensitive cell populations in clinical practice.

This dataset includes the FACS, 10X 3', Parse, 10X Flex, and Hive data and analysis.
DOI: 10.21233/a16q-a434
title: C053 (Wilson et al. 1994) diatom surface sample dataset

description: Raw data for the C053 (Wilson et al. 1994) diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.39wuwy
title: Occurrence Download

description: A dataset containing 166 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Mongolia)",
 "TaxonKey is Acer caudatifolium Hayata"
 ]
}

 The dataset includes 166 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026272-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/72s6-7b68
title: Bald Run Reservoir diatom surface sample dataset

description: Raw data for the Bald Run Reservoir diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.15388047
title: frantzia_panamensis_zanfona_1.fasta.gz
DOI: 10.5281/zenodo.15388048
title: frantzia_panamensis_zanfona_1.fasta.gz
DOI: 10.21233/q4cb-sp56
title: Hells Kitchen Lake plant macrofossil dataset

description: Raw data for the Hells Kitchen Lake plant macrofossil dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/cman-yh31
title: Cedar Lake diatom dataset

description: Raw data for the Cedar Lake diatom dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17909/ezts-7089
title: Creating test DOI in Basket
DOI: 10.21233/6maj-qq68
title: Craterpool testate amoebae surface sample dataset

description: Raw data for the Craterpool testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.14982615
title: Dynamic Nanodomains Dictate Macroscopic Properties in Lead Halide Perovskites

description: Data for Allegro ML models used in the paper "Dynamic nanodomains dictate macroscopic properties in lead halide perovskites"  ( https://arxiv.org/abs/2404.14598 )

Datasets in extend xyz format, ma_set.xyz and fa_set.xyz for MAPbBr3 and FAPbBr3, respectively.

Allegro models, ma_1.pth and fa_1.pth for MAPbBr3 and FAPbBr3, respectively.

Nequip/Allegro config files. ma_config.yaml and fa_config.yaml for MAPbBr3 and FAPbBr3, respectively.
DOI: 10.5281/zenodo.14982616
title: Dynamic Nanodomains Dictate Macroscopic Properties in Lead Halide Perovskites

description: Data for Allegro ML models used in the paper "Dynamic nanodomains dictate macroscopic properties in lead halide perovskites"  ( https://arxiv.org/abs/2404.14598 )

Datasets in extend xyz format, ma_set.xyz and fa_set.xyz for MAPbBr3 and FAPbBr3, respectively.

Allegro models, ma_1.pth and fa_1.pth for MAPbBr3 and FAPbBr3, respectively.

Nequip/Allegro config files. ma_config.yaml and fa_config.yaml for MAPbBr3 and FAPbBr3, respectively.
DOI: 10.21233/2cb6-cs35
title: Green Belt Lake diatom surface sample dataset

description: Raw data for the Green Belt Lake diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.8wteah
title: Occurrence Download

description: A dataset containing 113063997 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is iNaturalist Research-grade Observations"
 ]
}

 The dataset includes 113063997 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026262-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/jem4-7975
title: Lake Huron/North Channel/Aird Bay ostracode surface sample dataset

description: Raw data for the Lake Huron/North Channel/Aird Bay ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.