cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34943/0318b77e-ecc1-44d5-99fa-f107af1f2236
title: Endeavour South Current Meter Deployed 2012-06-14

description: The Nortek Aquadopp Current Meter A3L4912 AQD2935 was deployed on 2012-06-14 at Endeavour South. This south section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current metres have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/a7df1ac4-de2d-43d7-aa24-685a908c319d
title: Endeavour South Current Meter Deployed 2012-06-15

description: The Nortek Aquadopp Current Meter A2L2555 AQD2802 was deployed on 2012-06-15 at Endeavour South. This south section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current metres have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/289dae92-2335-4730-89a9-a30947d07268
title: Endeavour North Current Meter Deployed 2011-09-13

description: The Nortek Aquadopp Current Meter A2L2489 was deployed on 2011-09-13 at Endeavour North. This north section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current metres have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/a4b84ce5-1702-44ae-8593-7fc6e60a7a09
title: Endeavour South Current Meter Deployed 2012-06-15

description: The Nortek Aquadopp Current Meter A2L2498 AQD2760 was deployed on 2012-06-15 at Endeavour South. This south section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current metres have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/87d7fff3-0601-44e3-b9a3-6e963004e9be
title: Endeavour South Current Meter Deployed 2012-06-15

description: The Nortek Aquadopp Current Meter A2L2558 AQD2334 was deployed on 2012-06-15 at Endeavour South. This south section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current metres have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/fc3bb73b-c64b-45d5-8848-d84ec8a26294
title: Endeavour South Current Meter Deployed 2012-06-14

description: The Nortek Aquadopp Current Meter A3L4882 AQD3105 was deployed on 2012-06-14 at Endeavour South. This south section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current metres have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/e85ebd56-6df1-4f3d-87ae-ee70c8a7a7d3
title: Endeavour North Current Meter Deployed 2011-09-13

description: The Nortek Aquadopp Current Meter A2L2490 was deployed on 2011-09-13 at Endeavour North. This north section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current metres have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.5281/zenodo.5160123
title: Multiple sequence alignments of Treponema pallidum complete genomes using three different references for mapping NGS reads

description: Each file corresponds to the multiple sequence alignment of 75 complete Treponema pallidum genome sequences using the genomes of strains Nichols, SS14, and CDC-2 as references for mapping. This is supplemental data to the manuscript "Evolutionary processes in the emergence and recent spread of <em>Treponema pallidum</em>, the causative agent of syphilis" by Marta Pla-Díaz, Leonor Sánchez-Busó, Lorenzo Giacani, David Šmajs, Philipp P. Bosshard, Homayoun C. Bagheri, Verena J. Schuenemann, Kay Nieselt, Natasha Arora and Fernando González-Candelas
DOI: 10.5281/zenodo.5160122
title: Multiple sequence alignments of Treponema pallidum complete genomes using three different references for mapping NGS reads

description: Each file corresponds to the multiple sequence alignment of 75 complete Treponema pallidum genome sequences using the genomes of strains Nichols, SS14, and CDC-2 as references for mapping. This is supplemental data to the manuscript "Evolutionary processes in the emergence and recent spread of <em>Treponema pallidum</em>, the causative agent of syphilis" by Marta Pla-Díaz, Leonor Sánchez-Busó, Lorenzo Giacani, David Šmajs, Philipp P. Bosshard, Homayoun C. Bagheri, Verena J. Schuenemann, Kay Nieselt, Natasha Arora and Fernando González-Candelas
DOI: 10.34943/bdc95fc3-2653-4f4c-8233-a2b2a20f6e67
title: Endeavour North Current Meter Deployed 2011-09-13

description: The Nortek Aquadopp Current Meter A2L2495 was deployed on 2011-09-13 at Endeavour North. This north section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current metres have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/7a2711fa-6e4a-4d20-8a09-4625fad73d6d
title: Endeavour North Current Meter Deployed 2012-06-19

description: The Nortek Aquadopp Current Meter AQD2806 was deployed on 2012-06-19 at Endeavour North. This north section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current metres have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/5ac59b07-fd8a-4b8b-839f-32651339d4ca
title: Endeavour North Current Meter Deployed 2012-06-19

description: The Nortek Aquadopp Current Meter 2809 was deployed on 2012-06-19 at Endeavour North. This north section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current metres have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/92112479-63d6-40b3-9fd1-d8250a316995
title: Endeavour North Current Meter Deployed 2012-06-19

description: The Nortek Aquadopp Current Meter A2L2560 (AQD 2811) was deployed on 2012-06-19 at Endeavour North. This north section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Current Meter. Acoustic Current Meters (ACM) measure current speed and direction, using the Doppler Effect. Aquadopp current metres have a sensor head that contains 3 acoustic transducers, a tilt sensor, a temperature sensor and a pressure sensor. The instrument transmits a short pulse of sound, and then listens to its echo to measure the change in pitch or frequency. The change in pitch can determine the velocity of the current. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.5281/zenodo.5155176
title: French Validation of the Boyd and Zimbardo (1997) Transcendental-Future Time Perspective Scale.

description: Focusing on future temporal perspectives, the Transcendantal-Future Time Perspective scale (TFTP; Boyd and Zimbardo 1997) is specifically designed to measure beliefs about life after death as a one-dimensional, 10-item instrument. We sought in this study to contribute to the French validation of the TFTP scale in a French sample of 256 participants (202 females, 54 males) with a mean age of 34,44 years (<em>SD</em> = 12.62). Content validity was assessed using CFC-14, ZTPI-15, and Schwartz’s ten value measure. Independent variables such as religious affiliation and level of religious practice were also included, as well as control variables related to past experience of confrontation with death. Confirmatory Factor Analysis validated the unidimensionality of the French version of the TFTP scale. Content validity was demonstrated with ZTPI-Future, and nomological validity was confirmed. The findings from this study support the validity of TFTP for assessing cognitions about the future in a French context, in reference to the imagined death of the body and beyond.
DOI: 10.5517/ccdc.csd.cc2776b1
title: CCDC 2062502: Experimental Crystal Structure Determination

description: Related Article: Jerome Claverie|2021|CSD Communication|||
DOI: 10.5281/zenodo.5155175
title: French Validation of the Boyd and Zimbardo (1997) Transcendental-Future Time Perspective Scale.

description: Focusing on future temporal perspectives, the Transcendantal-Future Time Perspective scale (TFTP; Boyd and Zimbardo 1997) is specifically designed to measure beliefs about life after death as a one-dimensional, 10-item instrument. We sought in this study to contribute to the French validation of the TFTP scale in a French sample of 256 participants (202 females, 54 males) with a mean age of 34,44 years (<em>SD</em> = 12.62). Content validity was assessed using CFC-14, ZTPI-15, and Schwartz’s ten value measure. Independent variables such as religious affiliation and level of religious practice were also included, as well as control variables related to past experience of confrontation with death. Confirmatory Factor Analysis validated the unidimensionality of the French version of the TFTP scale. Content validity was demonstrated with ZTPI-Future, and nomological validity was confirmed. The findings from this study support the validity of TFTP for assessing cognitions about the future in a French context, in reference to the imagined death of the body and beyond.
DOI: 10.5517/ccdc.csd.cc2812hx
title: CCDC 2086408: Experimental Crystal Structure Determination

description: Related Article: Masahide Tominaga, Kousuke Fujimaru, Tadashi Hyodo, Kentaro Yamaguchi|2021|CrystEngComm|23|5157|doi:10.1039/D1CE00722J
DOI: 10.5517/ccdc.csd.cc2812jy
title: CCDC 2086409: Experimental Crystal Structure Determination

description: Related Article: Masahide Tominaga, Kousuke Fujimaru, Tadashi Hyodo, Kentaro Yamaguchi|2021|CrystEngComm|23|5157|doi:10.1039/D1CE00722J
DOI: 10.5517/ccdc.csd.cc2812kz
title: CCDC 2086410: Experimental Crystal Structure Determination

description: Related Article: Masahide Tominaga, Kousuke Fujimaru, Tadashi Hyodo, Kentaro Yamaguchi|2021|CrystEngComm|23|5157|doi:10.1039/D1CE00722J
DOI: 10.5517/ccdc.csd.cc2812l0
title: CCDC 2086411: Experimental Crystal Structure Determination

description: Related Article: Masahide Tominaga, Kousuke Fujimaru, Tadashi Hyodo, Kentaro Yamaguchi|2021|CrystEngComm|23|5157|doi:10.1039/D1CE00722J
DOI: 10.6073/pasta/1928f2fb364d9c7fc99d82abe73d98ec
title: CGR02 Sweep sampling of Grasshoppers on Konza Prairie LTER watersheds (Reformatted to the ecocomDP Design Pattern)

description: This data package is formatted as an ecocomDP (Ecological Community Data Pattern). For more information on ecocomDP see https://github.com/EDIorg/ecocomDP. This Level 1 data package was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-knz/29/18. The abstract below was extracted from the Level 0 data package and is included for context: Sweep samples were taken for grasshoppers (Acrididae) at two sites for each of 14 Konza Prairie LTER watersheds. Samples are taken in late July to early August. At each site on each occasion, 10 sets of 20 sweeps (200 sweeps total) are taken. Stored data include for each site on each occasion: total number of each species (all instars combined) collected and total number for each instar for each species (200 sweeps combined).
DOI: 10.25345/c55r92
title: MassIVE MSV000087943 - Deciphering the ciliary extracellular vesicle (EV) proteome
title: Cilia are conserved EV shedding organelles that release ciliary EVs for transmitting 13 signals. However, the content of ciliary EVs produced by living animals has not been explored. 14 Here we used evolutionarily conserved PKD-2::GFP EV cargo of Caenorhabditis elegans as a 15 marker of ciliary EVs to identify animal EV proteome. Top candidates were experimentally 16 confirmed using fluorescent reporter tracking and live animal imaging. Our findings indicate that 17 cilia produce multiple EVs with distinct protein content and that EVs from different neuronal 18 types carry different EV cargo. We discover that ciliary EVs carry nucleic acid binding proteins, 19 implying the role of cilia in epigenetic regulation and transfer of genetic information in trans. 20 Our dataset also contains non-ciliary EV cargo candidates from other tissues, such as cuticle, 21 somatic gonad, and germline, that can be explored using our MyEVome Web App.
DOI: 10.6084/m9.figshare.13252217.v2
title: Pharmaceutical industry–authored preprints: scientific and social media impact

description: Non–peer-reviewed manuscripts posted as preprints can be cited in peer-reviewed articles, which has both merits and demerits. International Committee of Medical Journal Editors guidelines mandate authors to declare preprints at the time of manuscript submission. We evaluated the trends in pharma-authored research published as preprints and their scientific and social media impact by analyzing citation rates and altmetrics. We searched EuroPMC, PrePubMed bioRxiv and medRxiv for preprints submitted by authors affiliated with the top 50 pharmaceutical companies from inception until 15 June 2020. Data were extracted and analyzed from the search results. The number of citations for the preprint and peer-reviewed versions (if available) were compiled using the Publish or Perish software (version 1.7). Altmetric score was calculated using the “Altmetric it” online tool. Statistical significance was analyzed by Wilcoxon rank-sum test. A total of 498 preprints were identified across bioRxiv (83%), PeerJ (5%), F1000Research (6%), Nature Precedings (3%), Preprint.org (3%), Wellcome Open Research preprint (0.2%) and medRxiv (0.2%) servers. Roche, Sanofi and Novartis contributed 56% of the retrieved preprints. The median number of citations for the included preprints was 0 (IQR = 1, Min–Max = 0–45). The median number of citations for the published preprints and unpublished preprints was 0 for both (IQR = 1, Min–Max = 0–25 and IQR = 1, Min-Max = 0–45, respectively; <i>p</i> = .091). The median Altmetric score of the preprints was 4 (IQR = 10.5, Min–Max = 0–160). Pharma-authored research is being increasingly published as preprints and is also being cited in other peer-reviewed publications and discussed in social media.
DOI: 10.6084/m9.figshare.13252217
title: Pharmaceutical industry–authored preprints: scientific and social media impact

description: Non–peer-reviewed manuscripts posted as preprints can be cited in peer-reviewed articles, which has both merits and demerits. International Committee of Medical Journal Editors guidelines mandate authors to declare preprints at the time of manuscript submission. We evaluated the trends in pharma-authored research published as preprints and their scientific and social media impact by analyzing citation rates and altmetrics. We searched EuroPMC, PrePubMed bioRxiv and medRxiv for preprints submitted by authors affiliated with the top 50 pharmaceutical companies from inception until 15 June 2020. Data were extracted and analyzed from the search results. The number of citations for the preprint and peer-reviewed versions (if available) were compiled using the Publish or Perish software (version 1.7). Altmetric score was calculated using the “Altmetric it” online tool. Statistical significance was analyzed by Wilcoxon rank-sum test. A total of 498 preprints were identified across bioRxiv (83%), PeerJ (5%), F1000Research (6%), Nature Precedings (3%), Preprint.org (3%), Wellcome Open Research preprint (0.2%) and medRxiv (0.2%) servers. Roche, Sanofi and Novartis contributed 56% of the retrieved preprints. The median number of citations for the included preprints was 0 (IQR = 1, Min–Max = 0–45). The median number of citations for the published preprints and unpublished preprints was 0 for both (IQR = 1, Min–Max = 0–25 and IQR = 1, Min-Max = 0–45, respectively; <i>p</i> = .091). The median Altmetric score of the preprints was 4 (IQR = 10.5, Min–Max = 0–160). Pharma-authored research is being increasingly published as preprints and is also being cited in other peer-reviewed publications and discussed in social media.
DOI: 10.6084/m9.figshare.13252217.v1
title: Pharmaceutical industry-authored preprints: scientific and social media impact

description: <b><i>Aim:</i></b> Non–peer-reviewed manuscripts posted as preprints can be cited in peer-reviewed articles which has both merits and demerits. International Committee of Medical Journal Editors guidelines mandate authors to declare preprints at the time of manuscript submission. We evaluated the trends in pharma-authored research published as preprints and their scientific and social media impact by analyzing citation rates and altmetrics. <b><i>Research design and methods:</i></b> We searched EuroPMC, PrePubMed bioRxiv and MedRxiv for preprints submitted by authors affiliated with the top 50 pharmaceutical companies from inception till June 15, 2020. Data were extracted and analyzed from the search results. The number of citations for the preprint and peer-reviewed versions (if available) were compiled using the Publish or Perish software (version 1.7). Altmetric score was calculated using the “Altmetric it” online tool. Statistical significance was analyzed by Wilcoxon rank-sum test. <b><i>Results:</i></b> A total of 498 preprints were identified across bioRxiv (83%), PeerJ (5%), F1000Research (6%), Nature Proceedings (3%), Preprint.org (3%), Wellcome Open Research preprint (0.2%) and MedRxiv (0.2%) servers. Roche, Sanofi and Novartis contributed 56% of the retrieved preprints. The median number of citations for the included preprints was 0 (IQR =1, Min-Max =0-45). The median number of citations for the published preprints and unpublished preprints was 0 for both (IQR =1, Min-Max =0-25 and IQR =1, Min-Max =0-45, respectively; <i>P</i> = .091). The median Altmetric score of the preprints was 4 (IQR =10.5, Min-Max =0-160). <b><i>Conclusion:</i></b> Pharma-authored research is being increasingly published as preprints and is also being cited in other peer-reviewed publications and discussed in social media.