cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0184300.10fu
title: SH0184300.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0184301.10fu
title: SH0184301.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0184302.10fu
title: SH0184302.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0184303.10fu
title: SH0184303.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0184304.10fu
title: SH0184304.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0184305.10fu
title: SH0184305.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0184306.10fu
title: SH0184306.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0184307.10fu
title: SH0184307.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0184308.10fu
title: SH0184308.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0184309.10fu
title: SH0184309.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.ydf5g5
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((143.875658 -36.499257, 143.875658 -36.501503, 143.868921 -36.501503, 143.868921 -36.503749, 143.873412 -36.503749, 143.873412 -36.505995, 143.882395 -36.505995, 143.882395 -36.499257, 143.886887 -36.499257, 143.886887 -36.494766, 143.889133 -36.494766, 143.889133 -36.49252, 143.89587 -36.49252, 143.89587 -36.499257, 143.898116 -36.499257, 143.898116 -36.510486, 143.913837 -36.510486, 143.913837 -36.49252, 143.907099 -36.49252, 143.907099 -36.499257, 143.904853 -36.499257, 143.904853 -36.490274, 143.900362 -36.490274, 143.900362 -36.488028, 143.898116 -36.488028, 143.898116 -36.490274, 143.886887 -36.490274, 143.886887 -36.483537, 143.882395 -36.483537, 143.882395 -36.485782, 143.88015 -36.485782, 143.88015 -36.488028, 143.877904 -36.488028, 143.877904 -36.490274, 143.875658 -36.490274, 143.875658 -36.49252, 143.873412 -36.49252, 143.873412 -36.494766, 143.868921 -36.494766, 143.868921 -36.497011, 143.862183 -36.497011, 143.862183 -36.499257, 143.875658 -36.499257), (143.875658 -36.499257, 143.875658 -36.494766, 143.88015 -36.494766, 143.88015 -36.499257, 143.875658 -36.499257))"
 ]
}

 The dataset includes 22 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065619-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.axtfrs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.420536 -32.198552, 149.420536 -32.200798, 149.427273 -32.200798, 149.427273 -32.198552, 149.420536 -32.198552))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065620-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26563716
title: Additional file 2 of Detection of the local adaptive and genome-wide associated loci in southeast Nigerian taro (Colocasia esculenta (L.) Schott) populations

description: Additional file 2: Table S2. Climatic data for BIO1 = Annual mean temperature (°C), BIO8 = Mean temperature of wettest quarter(°C) BIO9 = Mean temperature of driest quarter (°C), BIO10 = Mean temperature of warmest quarter (°C), BIO11 = Mean temperature of coldest quarter(°C), BIO12 = Annual precipitation(mm), BIO16 = Precipitation of wettest quarter(mm), BIO17(mm) = Precipitation of driest quarter (mm), BIO18 = Precipitation of warmest quarter (mm) and BIO19 = Precipitation of coldest quarter(mm).
DOI: 10.6084/m9.figshare.26563719
title: Additional file 3 of Detection of the local adaptive and genome-wide associated loci in southeast Nigerian taro (Colocasia esculenta (L.) Schott) populations

description: Additional file 3: Table S3. BLUE mean values of phenotypic traits: COD = corm diameter (cm), COL = corm length (cm), CRD = cormel diameter (cm), CRL = cornel length (cm), CRW = cormel weight (g), DM = days to maturity, NCR = Number of cormels per plant, PH = plant height (cm), NLPP = number of leaves per plant, NSPP = number of suckers per plant, PL = petiole length (cm), YPH (t/ha) = yield per hectare and YPP = yield per plants (kg/plant).
DOI: 10.5281/zenodo.13318208
title: Eitorf Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.15468/dl.ezvufe
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((143.514084 -36.505995, 143.514084 -36.517224, 143.51633 -36.517224, 143.51633 -36.505995, 143.514084 -36.505995))"
 ]
}

 The dataset includes 15 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065621-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26563740
title: Additional file 10 of Detection of the local adaptive and genome-wide associated loci in southeast Nigerian taro (Colocasia esculenta (L.) Schott) populations

description: Additional file 10: Table S5. List of co-located genes around five significant markers of the traits: COD = corm diameter (cm), COL = corm length (cm), CRD = cormel diameter (cm), CRL = cornel length (cm), CRW = cormel weight (g), DM = days to maturity, NCR = Number of cormels per plant, PH = plant height (cm), NLPP = number of leaves per plant, NSPP = number of suckers per plant, PL = petiole length (cm), YPH (t/ha) = yield per hectare and YPP = yield per plants (kg/plant).
DOI: 10.15468/dl.xnp43k
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.454223 -32.198552, 149.454223 -32.200798, 149.456469 -32.200798, 149.456469 -32.198552, 149.454223 -32.198552))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065622-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26563767
title: Additional file 4 of Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization

description: Additional file 4: Table S3. Number of dibutyl-phthalate (DBP) responsive transcription factor (TF) binding site gene sets and Chromatin remodeler cofactors, RNA interactors, Readers, Erasers and Writers (CRREWs). A) Enriched TF binding site gene sets. Enriched gene sets were separated based on the identification of having a known TF reported to bind. B) Number of DBP responsive CRREWs. Gene lists were generated from those RNA Element (RE)-containing RNAs (RE-RNAs) represented within Fig. 1. Representation factor and p value were determined by hypergeometric probability test.
DOI: 10.6084/m9.figshare.26563782
title: Additional file 9 of Phthalates impact on the epigenetic factors contributed specifically by the father at fertilization

description: Additional file 9: Table S8. Gene Ontology of dibutyl-phthalate (DBP) responsive, paternally provided RNA Element (RE)-containing RNAs (RE-RNAs) not within the enriched biological processes. Ontology was assigned using EnrichR. Bold text; indicates function related to the enriched biological processes highlighted in Fig. 2B, italics; indicate an ontology that is shared by at least two RE-RNAs, na; no ontology reported, not within EnrichR; the RE-RNA is not recognized by EnrichR, …; no relevance to enriched biological processes highlighted in Fig. 2B, B1HB2; background DBP study arm baseline to crossover to crossback, H1BH2; high-DBP study arm baseline to crossover to crossback, Paternally provided; fivefold paternally enriched and twofold paternally enriched RE-RNAs.
DOI: 10.6084/m9.figshare.26640916
title: Additional file 2 of Elucidation of the genetic determination of clutch traits in Chinese local chickens of the Laiwu Black breed

description: Additional file 2: Table S1. The clean data details of resequencing samples. Table S2. Mapping details of resequencing samples. Table S3. Distribution of SNPs after LD pruned. Table S4. Estimates of genetic correlations between clutch traits g using the relationship matrix that blends genomic information. Table S5. GWAS significant SNPs. Table S6. Annotations of GWAS significant SNPs. Table S7. The relationship between SNP genotypes with phenotypes. Table S8. The results of KEGG analysis. Table S9. The results of GO analysis.
DOI: 10.6084/m9.figshare.26640916.v1
title: Additional file 2 of Elucidation of the genetic determination of clutch traits in Chinese local chickens of the Laiwu Black breed

description: Additional file 2: Table S1. The clean data details of resequencing samples. Table S2. Mapping details of resequencing samples. Table S3. Distribution of SNPs after LD pruned. Table S4. Estimates of genetic correlations between clutch traits g using the relationship matrix that blends genomic information. Table S5. GWAS significant SNPs. Table S6. Annotations of GWAS significant SNPs. Table S7. The relationship between SNP genotypes with phenotypes. Table S8. The results of KEGG analysis. Table S9. The results of GO analysis.
DOI: 10.15468/dl.dn3u74
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((146.554896 -36.505995, 146.554896 -36.519469, 146.557142 -36.519469, 146.557142 -36.505995, 146.554896 -36.505995))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065623-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26587077
title: Additional file 3 of Investigating the relationship between depression and breast cancer: observational and genetic analyses

description: Additional file 3: Table S1. Depression IVs. Table S2. Summary of GWAS data. Table S3. Baseline characteristics of UK Biobank participants. Tables S4-S5. Annotation of CPASSOC-identified SNPs. Tables S6-S7. 99% credible sets of CPASSOC-identified SNPs. Table S8. Results from colocalization analysis for CPASSOC-identified SNPs. Table S9. TWAS significant gene-tissue pairs for depression, overall BC, and subtype-specific BC.
DOI: 10.6084/m9.figshare.26587077.v1
title: Additional file 3 of Investigating the relationship between depression and breast cancer: observational and genetic analyses

description: Additional file 3: Table S1. Depression IVs. Table S2. Summary of GWAS data. Table S3. Baseline characteristics of UK Biobank participants. Tables S4-S5. Annotation of CPASSOC-identified SNPs. Tables S6-S7. 99% credible sets of CPASSOC-identified SNPs. Table S8. Results from colocalization analysis for CPASSOC-identified SNPs. Table S9. TWAS significant gene-tissue pairs for depression, overall BC, and subtype-specific BC.
DOI: 10.15468/dl.34rfq5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((149.074683 -32.212027, 149.074683 -32.214273, 149.079174 -32.214273, 149.079174 -32.212027, 149.074683 -32.212027))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065625-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26640964
title: Additional file 1 of Identification of hub genes and their correlation with immune infiltrating cells in membranous nephropathy: an integrated bioinformatics analysis

description: Additional file 1. GSE108113 and GSE200828 merged data.
DOI: 10.6084/m9.figshare.26640964.v1
title: Additional file 1 of Identification of hub genes and their correlation with immune infiltrating cells in membranous nephropathy: an integrated bioinformatics analysis

description: Additional file 1. GSE108113 and GSE200828 merged data.
DOI: 10.6084/m9.figshare.26640967
title: Additional file 2 of Identification of hub genes and their correlation with immune infiltrating cells in membranous nephropathy: an integrated bioinformatics analysis

description: Additional file 2. The differentially expressed genes of merged data.
DOI: 10.6084/m9.figshare.26640967.v1
title: Additional file 2 of Identification of hub genes and their correlation with immune infiltrating cells in membranous nephropathy: an integrated bioinformatics analysis

description: Additional file 2. The differentially expressed genes of merged data.
DOI: 10.6084/m9.figshare.26640970.v1
title: Additional file 3 of Identification of hub genes and their correlation with immune infiltrating cells in membranous nephropathy: an integrated bioinformatics analysis

description: Additional file 3. GO enrichment analyses.
DOI: 10.6084/m9.figshare.26640970
title: Additional file 3 of Identification of hub genes and their correlation with immune infiltrating cells in membranous nephropathy: an integrated bioinformatics analysis

description: Additional file 3. GO enrichment analyses.