cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.20813626
title: Data from: What do we mean with sound semantics, exactly? A survey of taxonomies and ontologies of everyday sounds

description: Data from: What do we mean with sound semantics, exactly? A survey of taxonomies and ontologies of everyday sounds (2022, Frontiers in Psychology) <br> Bruno L. Giordano1,*§, Ricardo de Miranda Azevedo2,*, Yenisel Plasencia-Calaña3, Elia Formisano3,4,¶, Michel Dumontier2,3,¶ <br> 1 Institut des Neurosciences de La Timone, CNRS UMR 7289 – Université Aix-Marseille, Marseille, France; <br> 2 Institute of Data Science, Faculty of Science and Engineering, Maastricht University, Maastricht, The Netherlands <br> 3 BISS institute, Faculty of Science and Engineering, Maastricht University, Maastricht, The Netherlands <br> 4 Department of Cognitive Neuroscience, Faculty of Psychology and Neuroscience, Maastricht University, Maastricht, The Netherlands <br> * co-first author ¶ co-senior author § correspondence: bruno.giordano@univ-amu.fr <br> Abstract:<br> Taxonomies and ontologies for the characterization of everyday sounds have been developed in several research fields, including auditory cognition, soundscape research, artificial hearing, sound design, and medicine. Here, we surveyed thirty-six of such knowledge organization systems, which we identified through a systematic literature search. To evaluate the semantic domains covered by these systems within a homogeneous framework, we introduced a comprehensive set of verbal sound descriptors (sound source properties; attributes of sensation; sound signal descriptors; onomatopoeias; music genres), which we used to manually label the surveyed descriptor classes. We reveal that most taxonomies and ontologies were developed to characterize higher-level semantic relations between sound sources in terms of the sound-generating objects and actions involved (what/how), or in terms of the environmental context (where). This indicates the current lack of a comprehensive ontology of everyday sounds that covers simultaneously all semantic aspects of the relation between sounds. Such an ontology may have a wide range of applications and purposes, ranging from extending our scientific knowledge of auditory processes in the real world, to developing artificial hearing systems. <br> Usage: We include data for 36 taxonomies/ontologies of natural sounds (xlsx file). An owl implementation for each of the taxonomies/ontologies is also provided (zip file).
DOI: 10.17038/xsd/1373576
title: Varied volume fractions of borosilicate glass spheres with diameter gaussian distributed from 38-45 micronsen cased in a polypropylene matrix
DOI: 10.5257/census/aggregate-2001-1
title: 2001 Census aggegate data (Data downloaded: 1 January 2005)
DOI: 10.5441/002/edbt.2019.15
title: Indexing Trajectories for Travel-Time Histogram Retrieval
DOI: 10.6073/pasta/effd9e98134913af21b670febebd6233
title: Macrophyte count data collected from Northeast Shark Slough, Everglades National Park (FCE) from September 2006 to Present

description: Three 1m2 throws are made within a few meters of each site center. Within each throw, all emergent macrophytes are counted (live and dead) and recorded. Submerged periphyton-associated aquatic vegetation are identified and recorded as a percentage of the total periphyton component. Macrophyte cover is recorded in percent cover, and average plant height is determined from three representative plants. Water depth is also recorded as an average of three depths.
DOI: 10.6084/m9.figshare.20425209
title: LanA Dataset

description: This repository hosts the dataset associated with the Nature Scientific Data Language Atlas Data Descriptor. Four packages are made available for download. <br> 1. SPM Atlas: NIfTI of language atlas in MNI volume space. 2. FS Atlas: NIfTI of language atlas in FreeSurfer surface space. 3. SPM Subjects: Individual participant maps in MNI volume space. 4. FS Subjects: Individual participant maps in FreeSurfer surface space. <br> Subject packages provide NIfTI images of raw contrasts and t-maps, a PNG image of each hemisphere's activation topography, and a TXT file containing participant demographics, as well as first-level model parameters and summary statistics.
DOI: 10.17028/rd.lboro.13147982.v1
title: LUCAT design process data sets

description: The Loughborough User Centred Assistive Technology design process, LUCAT, had been used in the training of Industrial designers and Design ergonomists, Ergonomists and Engineers since 2000. An estimated 518 students were taught the process over a twenty-year period. Graduates were contacted via a professional networking website to take part in a survey with four being interviewed. The purpose of the survey was to find out if: 1) Did they still use any parts of the process; and 2) Where they had applied them. The respondents ranged from recent graduates to senior managers in research and development within major companies. From the 105 respondents 23% stated they used parts of the LUCAT process every working day, a further 25% once a week and 27% once a month. The elements of the process used were predominantly semi-structured interviews, concept generation, codesign, design presentation and feedback. The respondents highlighted the benefits of using the process as effectively gaining insights from users, time efficient, saving money, developing relationship with end users and making a difference to the lives of people with disability. The use of the process was shown to be useful beyond AT product design into most areas of design activity.
DOI: 10.15473/1415580
title: AeroDyn V15.04: Design Tool for Wind and MHK Turbines

description: AeroDyn is a time-domain wind and MHK turbine aerodynamics module that can be coupled into the FAST version 8 multi-physics engineering tool to enable aero-elastic simulation of horizontal-axis wind turbines. AeroDyn V15.04 has been updated to include a cavitation check for MHK turbines, and can be driven as a standalone code to compute wind turbine aerodynamic response uncoupled from FAST. Note that while AeroDyn has been updated to v15.04, FAST v8.16 has not yet been updated and still uses AeroDyn v15.03.
DOI: 10.3886/e113121v1
title: Replication data for: The Economic Effects of the Abolition of Serfdom: Evidence from the Russian Empire

description: We document substantial increases in agricultural productivity, industrial output, and peasants' nutrition in Imperial Russia as a result of the abolition of serfdom in 1861. Before the emancipation, provinces where serfs constituted the majority of agricultural laborers lagged behind provinces that primarily relied on free labor. The emancipation led to a significant but partial catch up. Better incentives of peasants resulting from the cessation of ratchet effect were a likely mechanism behind a relatively fast positive effect of reform on agricultural productivity. The land reform, which instituted communal land tenure after the emancipation, diminished growth in productivity in repartition communes.
DOI: 10.3886/e151982v1
title: Data and code for: Pre-test with Caution: Event-study Estimates After Testing for Parallel Trends

description: Replication code and data for ''Pre-test with Caution: Event-study Estimates After Testing for Parallel Trends'' by Jonathan Roth, published in AER: Insights. <br><br>The abstract of the paper is as follows: <br><br> This paper discusses two important limitations of the common practice of testing for pre-existing differences in trends (''pre-trends'') when using difference-in-differences and related methods. First, conventional pre-trends tests may have low power. Second, conditioning the analysis on the result of a pre-test can distort estimation and inference, potentially exacerbating the bias of point estimates and undercoverage of confidence intervals. I analyze these issues both in theory and in simulations calibrated to a survey of recent papers in leading economics journals, which suggest that these limitations are important in practice. I conclude with practical recommendations for mitigating these issues.<br>
DOI: 10.4225/08/5914ef9e2c6b5
title: RDF representation of 2016 edition of International Chronostratigraphic Chart (Geologic Timescale)

description: A set of RDFgraphs representing the International [Chrono]stratigraphic Chart, comprising Turtle serializations of data from the2016 version, along with updated ontologies that define the structure of the data. 

In this version the Geological Timescale Model is aligned with the W3C OWL-Time ontology https://www.w3.org/TR/owl-time/ for the temporal topology, with OGC GeoSw3PARQL http://www.opengeospatial.org/standards/geosparql for location data, and with the W3C SOSA/SSN ontology for samples.
DOI: 10.6084/m9.figshare.19276061.v2
title: Raw data for body weight

description: Body weight raw dataFlow cytometry raw data<br>
DOI: 10.18112/openneuro.ds001510.v2.0.2
title: Schematic narrative perception and recall (intact)
DOI: 10.5281/zenodo.3243512
title: ALICE multi camera image set

description: Images of pinned insects from multiple camera views with associated calibration grid images. This image set is used for label identification and segmentation in the ALICE project. https://doi.org/10.31219/osf.io/s2p73
description: {"references": ["Price, Benjamin W., Steen Dupont, Elizabeth L. Allan, Vladimir Blagoderov, Alice J. Butcher, James Durrant, Pieter Holtzhausen, et al. 2018. \"ALICE: Angled Label Image Capture and Extraction for High Throughput Insect Specimen Digitisation.\" OSF Preprints. November 5. doi:10.31219/osf.io/s2p73"]}
DOI: 10.6084/m9.figshare.5089939.v1
title: Epistasis mediated alleviation of the cost of antibiotic resistance for MRSA

description: Assembled genomes of mupirocin resistance mutant strain MY40 and the SH1000 parental strain.
DOI: 10.3886/e113709v1
title: Replication data for: School Finance Reform and the Distribution of Student Achievement

description: We study the impact of post-1990 school finance reforms, during the so-called "adequacy" era, on absolute and relative spending and achievement in low-income school districts. Using an event study research design that exploits the apparent randomness of reform timing, we show that reforms lead to sharp, immediate, and sustained increases in spending in low-income school districts. Using representative samples from the National Assessment of Educational Progress, we find that reforms cause increases in the achievement of students in these districts, phasing in gradually over the years following the reform. The implied effect of school resources on educational achievement is large.
DOI: 10.6073/pasta/e3871e749fa737dd94d5a269ac90e8ce
title: At-sea seabird censuses. Data on the species encountered (including marine mammals), their abundance, distribution and behavior. Data collected aboard cruises off the coast of the Western Antarctic Penninsula, 1993 - present.

description: The objectives of the LTER seabird component during the 92-93 season cruises were similar. These objectives included 1) determining the pelagic abundance and distribution of Adelie Penguins, 2) examining how the physical and biological characteristics of the marine environment influence these parameters and, 3) using these data to identify foraging areas that may be important to Adelie populations being studied as part of land-based work at Palmer Station. Secondary objectives included documenting the abundance and distribution of other seabirds and marine mammals within the LTER study area. The focus of the January cruise was the nearshore foraging habitat,which required sampling at smaller scales. All seabird censuses were thus conducted within approximately 100 kms of Palmer Station while traversing a sampling grid with stations at 10km intervals. The first two days (18-20 January) of this cruise were spent covering the selected grid as rapidly as possible resulting in 45 transects spaced at 45-60 minute intervals. There were no stops at the 10km stations during this Fast Grid phase. Upon completion of the Fast Grid, a force 12 gale suspended data collection for 24 hours. From January 22-25 the grid direction was reversed and the grid repeated. During this Slow Grid phase, 2-M net tows were done at 10km intervals and BOPS and 1-M and 2-M net tows every 20 km. All seabird censuses during the cruise were done using the procedures outlined in the previous paragraph.
DOI: 10.18112/openneuro.ds003017.v1.0.3
title: An fMRI dataset in response to "The Grand Budapest Hotel", a socially-rich, naturalistic movie
DOI: 10.3886/e165621v1
title: Data and Code for: Methods Matter: P-Hacking and Publication Bias in Causal Analysis in Economics: Reply

description: This is the replication package of Methods Matter: P-Hacking and Publication Bias in Causal Analysis in Economics: Reply.
DOI: 10.48320/9211b92e-a806-4e6c-ad75-d031a910b9f1
title: Journalists in competitive authoritarian regimes. The case of Ukraine 2010-14
DOI: 10.5281/zenodo.1044059
title: Wrf-Chem Output Supporting Manuscript "Sources Of Black Carbon Deposition To The Himalayan Glaciers In Current And Future Climates"

description: Selected output from WRF-Chem v3.6.1 on black carbon deposition, rainfall, and snowfall over Southeast Asia. These files were used to prepare the figures and tables in the manuscript "Sources of Black Carbon Deposition to the Himalayan Glaciers in Current and Future Climates" by these authors. Files are in NetCDF format and contain metadata describing their contents. The naming convention is:

YYYY_MM_EXT_daily_12km_dustfix.nc

where YYYY_MM is the simulated year and month and the extensions are:

NFC - No Further Control emission scenario

MIT - Mitigation emission scenario

EN - Simulated El Nino year

LN - Simulated La Nina year
DOI: 10.5281/zenodo.6256190
title: Within Population Variability of Coral Heat Tolerance - Images

description: Image dataset used for a colour analysis of coral branches throughout a long-term marine heatwave emulation experiment using machine learning. Article: "Within population variability in coral heat tolerance indicates climate adaptation potential" by Humanes and Lachs et al. Code to analyse the dataset is found at 10.5281/zenodo.6256164.
description: LL received funding from Natural Environment Research Council (NERC) ONE Planet Doctoral Training Partnership (NE/S007512/1).
DOI: 10.5281/zenodo.6573615
title: Data for "Laplacian-level meta-GGA for the weakly-nonlocal solid and liquid metals"

description: This dataset contains all VASP inputs and outputs for the paper "Improved Laplacian-level meta-GGA for the weakly-nonlocal solid and liquid metals." For the preprint, see arXiv:2203.09403, and for the reference densities, fitting routines, and analysis scripts, see the Gitlab code repository. Description of individual tarballs: AE6: 6-molecule set of atomization energies ferro: relaxed geometries and magnetic moments for the ferromagnetic solids Fe, Ni, and Co intermetallics: formation energies of three intermetallic solids, HfOs, ScPt, and VPt<sub>2</sub> LC20: relaxed geometries and equilibrium bulk moduli for the LC20 set of cubic solids. Equilibrium geometries by equation of state fit. Bandgaps for select insulators are included here. LC20_stress_tensor: same as LC20, but equilibrium geometries found by minimizing forces on unit cell computed with Laplacian-dependent stress tensor LC23: equilibrium geometries, bulk moduli, and cohesive energies for the LC23 set (LC20 + K, Rb, and Cs) found by equation of state fit. Bandgaps for select insulators are included here. Pt_monovac: monovacancy formation energies for Pt, computed in a few different ways described in the text
description: A.D.K. and J.P.P. acknowledge the support of the U.S. Department of Energy, Office of Science, Basic Energy Sciences, through Grant No. DE-SC0012575 to the Energy Frontier Research Center: Center for Complex Materials from First Principles. J.P.P. also acknowledges the support of the National Science Foundation under Grant No. DMR-1939528. A.D.K. thanks Temple University for a Presidential Fellowship.
DOI: 10.5281/zenodo.6926423
title: Tau and Retromer Dataset

description: Microscopy and other data related to <strong>Retromer deficiency enhances the truncation and toxicity of Tau</strong> Jamshid Asadzadeh, Evelyne Ruchti, Wei Jiao, Greta Limoni, Catherine MacLachlan, Scott A. Small, Graham Knott, Ismael Santa-Maria and Brian D. McCabe. Brain Mind Institute, EPFL, Switzerland - https://mccabelab.org
DOI: 10.6084/m9.figshare.20425002.v1
title: Simulation: Dogbone Tension

description: The results in the subdirectories are calculated with the FEM code FEAP 8.6 and an electro-mechanical phase-field element. <br> The four subdirectories contain the inputfiles (and associated files) for the simulations as well as - 00_create-parameter-study.sh, - collect-Ogden.py, - state.pvsm, - state2.pvsm. <br> The Linux shell script "00_create-parameter-study.sh" prepares the parameter studies into new subdirectories and drives the simulations. <br> The python script "collect-Ogden.py" collects the force-displacement results from the simulations, determine the critical loads and prepare the data file "Ogden.dat" <br> The ParaView state files (*.pvsm) help to visualise the simulations results (*.vtu) using the Visualization Toolkit library (VTK, https://vtk.org/). <br> <br> The gnuplot file "plot-el-potential.plt" is used to create Fig. 11b out of the parameter studies (http://www.gnuplot.info/). <br>
DOI: 10.34724/casd.137.1404.v1
title: Déclarations annuelle de données sociales : fichiers Salariés - 2012

description: Fichiers régionaux « salariés » contenant des données par salariés et l’agrégation des données « postes ».
DOI: 10.5281/zenodo.163886
title: Jazzcats Body And Soul Discography

description: This dataset was generated for <em>JazzCats (Jazz Collection of Aggregated Triples)</em> and describes over 200 recordings of the jazz standard <em>Body and Soul</em>. Further information about <em>JazzCats</em> is available at http://jazzcats.oerc.ox.ac.uk/ This dataset is derived from Jose Bowen's <em>Body and Soul</em> discography, published as supplementary data to <em>Who plays the tune in “Body and Soul”? A performance history using recorded sources</em>. Bowen's discography is available at http://josebowen.com/body-and-soul/
DOI: 10.5281/zenodo.5704508
title: Kapp Linne Lindroth

description: 1. Half-hourly fluxes of CO2 using eddy covariance on a moist moss tundra on Kapp Linne, Svalbard during growing season 2015 2. Fluxes of CO2 and CH4 measured during growing season 2005 and 2016 with a chamber system connected with a Los Gatos Ultraportable Gas Analyzer. 3. Publication submitted to Biogeosciences November 2021: Moist moss tundra on Kapp Linne, Svalbard is a net source of CO<sub>2</sub> and CH<sub>4</sub> to the atmosphere A. Lindroth<sup>1</sup>, N. Pirk<sup>2</sup>, I. S. Jónsdóttir<sup>3</sup>, C. Stiegler<sup>4</sup>, L. Klementsson<sup>5</sup>, and M. B. Nilsson<sup>6</sup> <sup>1</sup>Department of Physical Geography and Ecosystem Science, Lund University, Lund, Sweden. <sup>2</sup>Department of Geosciences, University of Oslo, Oslo, Norway. <sup>3</sup>Life and Environmental Sciences, University of Iceland, Reykjavik, Iceland. <sup>4</sup>Bioclimatology, Georg-August Universität Göttingen, Göttingen, Germany. <sup>5</sup>Department of Earth Sciences, University of Gothenburg, Gothenburg, Sweden. <sup>6</sup>Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, Umeå, Sweden. Corresponding author: anders.lindroth@nateko.lu.se
description: No specific funding was obtained for this work. Authors were supported by their respective organisations.
DOI: 10.5281/zenodo.5806358
title: Uncertainties of monthly discharge data and parameters for the ungauged catchments of the Ethiopian Rift Valley Lake Basin (RVLB)

description: In this study to quantify the uncertainty of the regionalization procedure, we apply all 14 regionalized models that were created for the leave-one-out evaluation to the ungauged catchments. With this regard, an ensemble of 14 predicted streamflow time series is produced for each ungauged catchment to reflect the regionalization uncertainty. The entire procedures used to create the dataset are provided within the manuscript. We provide the summary of the data below: 1) We provided the Uncertainties of Monthly Discharge simulation for the ungauged catchments obtained from the regionalization. The data is provided by excel file as Uncertainties_of_Monthly_Discharge_Ungauged.xlsx. This file contains 35 sheets for the 35 ungauged catchment, and 14 prediction intervals (ensembles) on each sheet. The data ranges from 1995-2007 on a monthly scale and contains 156-row values for the 13-year simulation periods. 2) We also provided the Uncertainties of parameters for the ungauged catchments. The data is prepared in the file (Uncertainties_of_parameters_ungauged_catchments.xlsx), which contains 9 parameters for the 14-prediction interval. These parameter values are saved in 35 sheets representing the 35 ungauged catchments in the order 1 to 35. The order of parameters is shown in Table 3 of the manuscript.
DOI: 10.5281/zenodo.6618131
title: PhytoNodes for Environmental Monitoring: Stimulus Classification based on Natural Plant Signals in an Interactive Energy-efficient Bio-hybrid System

description: Cities worldwide are growing, putting bigger populations at risk due to urban pollution. Environmental monitoring is essential and requires a major paradigm shift. We need green and inexpensive means of measuring at high sensor densities and with high user acceptance. We propose using phytosensing: using natural living plants as sensors. In plant experiments we gather electrophysiological data with sensor nodes. We expose the plant <em>Zamioculcas zamiifolia</em> to five different stimuli: wind, temperature, blue light, red light, or no stimulus. Using that data we train ten different types of artificial neural networks to classify measured time series according to the respective stimulus. We achieve good accuracy and succeed in running trained classifying artificial neural networks online on the microcontroller of our small energy-efficient sensor node. To indicate later possible use cases, we showcase the system by sending a notification to a smartphone application once our continuous signal analysis detects a given stimulus. Data repository for our paper "PhytoNodes for Environmental Monitoring: Stimulus Classification based on<br> Natural Plant Signals in an Interactive Energy-efficient Bio-hybrid System", submitted to the GoodIT conference. Please refer to the paper for more information. <strong>Contents of this repository</strong> <em>mu_interface:</em> Code for our data collection plant experiments, based on Raspberry Pis and the Cybertronica phytosensing and phytoactuating system. <em>raw_data: </em>The datasets from our plant experiments for the stimuli wind, temperature, red light, blue light, and no stimulus. <em>dl-4-tsc:</em> Deep learning framework developed by Fawaz et. al (Deep learning for time series classification: a review) and adapted to our use case. Find the training and testing datasets in the archives folder as well as the trained classifiers in the results folder. <em>classification_results.ods: </em>Overview of the results from the deep learning framework (accuracy, precision, recall, training time). <em>TFLite_Models: </em>The trained classifiers in TensorFlow Lite Format. <em>00_AI_BLE_MeasuringOnlyWind: </em>Source code for classification on STM-based PhytoNodes (using MCDCNN two-class classifier) and Bluetooth communication. The code is written for the STM32WB55 Nucleo board and can be transferred to the dongle. <em>zavrsniProjekt_iOS: </em>Source code of the iOS app used to receive data from the STM-based PhytoNodes. <em>Watchplant_application_documentation.pdf: </em>Instructions to build and use the iOS app.
DOI: 10.6084/m9.figshare.16774747
title: Supplementary Data supporting 'Evolutionary analysis of swimming speed in early vertebrates challenges the ‘New Head Hypothesis’' Humberto G. Ferrón and Philip C. J. Donoghue

description: Supplementary Data 1. R code and associated files<br>