cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.uxnmp4
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.719846 -32.598304, 148.719846 -32.614025, 148.722092 -32.614025, 148.722092 -32.605042, 148.72883 -32.605042, 148.72883 -32.602796, 148.726584 -32.602796, 148.726584 -32.598304, 148.72883 -32.598304, 148.72883 -32.596059, 148.726584 -32.596059, 148.726584 -32.589321, 148.722092 -32.589321, 148.722092 -32.582584, 148.726584 -32.582584, 148.726584 -32.58483, 148.735567 -32.58483, 148.735567 -32.582584, 148.733321 -32.582584, 148.733321 -32.580338, 148.72883 -32.580338, 148.72883 -32.566863, 148.724338 -32.566863, 148.724338 -32.571355, 148.719846 -32.571355, 148.719846 -32.573601, 148.722092 -32.573601, 148.722092 -32.575846, 148.726584 -32.575846, 148.726584 -32.580338, 148.719846 -32.580338, 148.719846 -32.575846, 148.717601 -32.575846, 148.717601 -32.573601, 148.710863 -32.573601, 148.710863 -32.575846, 148.713109 -32.575846, 148.713109 -32.580338, 148.717601 -32.580338, 148.717601 -32.582584, 148.719846 -32.582584, 148.719846 -32.591567, 148.722092 -32.591567, 148.722092 -32.598304, 148.719846 -32.598304)), ((148.719846 -32.598304, 148.719846 -32.596059, 148.710863 -32.596059, 148.710863 -32.598304, 148.719846 -32.598304)), ((148.722092 -32.614025, 148.722092 -32.620762, 148.72883 -32.620762, 148.72883 -32.618517, 148.726584 -32.618517, 148.726584 -32.614025, 148.722092 -32.614025)), ((148.72883 -32.618517, 148.742304 -32.618517, 148.742304 -32.620762, 148.751288 -32.620762, 148.751288 -32.618517, 148.749042 -32.618517, 148.749042 -32.614025, 148.751288 -32.614025, 148.751288 -32.607288, 148.737813 -32.607288, 148.737813 -32.611779, 148.72883 -32.611779, 148.72883 -32.618517)), ((148.737813 -32.607288, 148.737813 -32.605042, 148.742304 -32.605042, 148.742304 -32.596059, 148.735567 -32.596059, 148.735567 -32.598304, 148.737813 -32.598304, 148.737813 -32.602796, 148.735567 -32.602796, 148.735567 -32.607288, 148.737813 -32.607288)), ((148.735567 -32.58483, 148.735567 -32.589321, 148.737813 -32.589321, 148.737813 -32.58483, 148.735567 -32.58483)))"
 ]
}

 The dataset includes 34 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067132-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26605777
title: Additional file 1 of Neutrophil extracellular traps promote angiogenesis in gastric cancer

description: Additional file 1: Table S1. Differential proteins identified by TMT-MS/MS.
DOI: 10.6084/m9.figshare.26673627
title: Additional file 1 of Single-nucleus transcriptomic analysis reveals the relationship between gene expression in oligodendrocyte lineage and major depressive disorder

description: Additional file 1: Figure S1：Oligodendrocyte lineage cell clusters of 38 female HC and MDD visualized by UMAP. (A): Colors indicate a female subject (HC or MDD). (B): Colors indicate cell types. Each dot represents one nucleus. HC: healthy control; MDD: major depressive disorder; UMAP: uniform manifold approximation and projection. Figure S2：Pseudotime trajectory (Monocle analysis) of the Oligodendrocyte lineage.(A): Cells are colored based according to the cell type; (B): Cells are colored based according to the predicted pseudotime. Figure S3：Constructing GRRF model for distinguishing two adjacent developmental stages. ROC plot in (A) OPC1/OPC2, (B) OPC2/Oligos1, (C) Oligos1/Oligos2, (D) Oligos2/Oligos3. Top 30 genes and Gini scores in (E) OPC1/OPC2, (F) OPC2/Oligos1,(E) Oligos1/Oligos2, (F) Oligos2/Oligos3. Figure S4：Constructing GRRF model from DEGs in four cell types distinguishing HC and MDD. ROC plot in (A) OPC1, (B) OPC2, (C) Oligos1, (D) Oligos2, (E) Oligos3. Top 30 genes and Gini scores in (F) OPC1, (G) OPC2, (H) Oligos1, (I) Oligos2, (J) Oligos3. Table S1: Depression-associated genes in IPA. Table S2: Depression-associated genes in PsyGeNET. Table S3: Depression-associated genes in MDD-related pathways. Table S4: The union of supplementary1&2&3 (Union). Table S5: VIP scores of the top 5 components of the top 100 genes distinguishing four development stages. Table S6: Genes with top 100 Gini scores in four stages. Table S7: Top 100 genes distingush between Stage1&Stage2. Table S8: Top 100 genes distingush between Stage2&Stage3. Table S9: Top 100 genes distingush between Stage3&Stage4. Table S10: GO analysis of top 100 genes in Stage1&Stage2 (Group1). Table S11: GO analysis of top 100 genes in Stage2&Stage3 (Group2). Table S12: GO analysis of top 100 genes in Stage3&Stage4 (Group3). Table S13: Gini scores of top 100 genes of HC and MDD in Stage1. Table S14: Gini scores of top 100 genes of HC and MDD in Stage2. Table S15: Gini scores of top 100 genes of HC and MDD in Stage3. Table S16: Gini scores of top 100 genes of HC and MDD in Stage4. Table S17: Number of DEGs for 5 cell types. Table S18: Number of DEGs for developmental stage of different cell types.
DOI: 10.6084/m9.figshare.26673627.v1
title: Additional file 1 of Single-nucleus transcriptomic analysis reveals the relationship between gene expression in oligodendrocyte lineage and major depressive disorder

description: Additional file 1: Figure S1：Oligodendrocyte lineage cell clusters of 38 female HC and MDD visualized by UMAP. (A): Colors indicate a female subject (HC or MDD). (B): Colors indicate cell types. Each dot represents one nucleus. HC: healthy control; MDD: major depressive disorder; UMAP: uniform manifold approximation and projection. Figure S2：Pseudotime trajectory (Monocle analysis) of the Oligodendrocyte lineage.(A): Cells are colored based according to the cell type; (B): Cells are colored based according to the predicted pseudotime. Figure S3：Constructing GRRF model for distinguishing two adjacent developmental stages. ROC plot in (A) OPC1/OPC2, (B) OPC2/Oligos1, (C) Oligos1/Oligos2, (D) Oligos2/Oligos3. Top 30 genes and Gini scores in (E) OPC1/OPC2, (F) OPC2/Oligos1,(E) Oligos1/Oligos2, (F) Oligos2/Oligos3. Figure S4：Constructing GRRF model from DEGs in four cell types distinguishing HC and MDD. ROC plot in (A) OPC1, (B) OPC2, (C) Oligos1, (D) Oligos2, (E) Oligos3. Top 30 genes and Gini scores in (F) OPC1, (G) OPC2, (H) Oligos1, (I) Oligos2, (J) Oligos3. Table S1: Depression-associated genes in IPA. Table S2: Depression-associated genes in PsyGeNET. Table S3: Depression-associated genes in MDD-related pathways. Table S4: The union of supplementary1&2&3 (Union). Table S5: VIP scores of the top 5 components of the top 100 genes distinguishing four development stages. Table S6: Genes with top 100 Gini scores in four stages. Table S7: Top 100 genes distingush between Stage1&Stage2. Table S8: Top 100 genes distingush between Stage2&Stage3. Table S9: Top 100 genes distingush between Stage3&Stage4. Table S10: GO analysis of top 100 genes in Stage1&Stage2 (Group1). Table S11: GO analysis of top 100 genes in Stage2&Stage3 (Group2). Table S12: GO analysis of top 100 genes in Stage3&Stage4 (Group3). Table S13: Gini scores of top 100 genes of HC and MDD in Stage1. Table S14: Gini scores of top 100 genes of HC and MDD in Stage2. Table S15: Gini scores of top 100 genes of HC and MDD in Stage3. Table S16: Gini scores of top 100 genes of HC and MDD in Stage4. Table S17: Number of DEGs for 5 cell types. Table S18: Number of DEGs for developmental stage of different cell types.
DOI: 10.6084/m9.figshare.26605786.v1
title: Additional file 4 of Neutrophil extracellular traps promote angiogenesis in gastric cancer

description: Additional file 4.
DOI: 10.6084/m9.figshare.26605777.v1
title: Additional file 1 of Neutrophil extracellular traps promote angiogenesis in gastric cancer

description: Additional file 1: Table S1. Differential proteins identified by TMT-MS/MS.
DOI: 10.25318/3210002401-fra
title: Exploitants agricoles classés selon le type d’exploitation agricole et le niveau de scolarité atteint, Couplage Agriculture–Population, 2016, inactif

description: Couplage Agriculture–Population, 2016. Exploitants agricoles classés selon le type d’exploitation agricole et le plus haut niveau de scolarité atteint. Le type d'exploitation est basé sur le Système de Classification des Industries de l'Amérique du Nord (SCIAN).
DOI: 10.6084/m9.figshare.26605831
title: Additional file 6 of Variation in responses to photoperiods and temperatures in Japanese medaka from different latitudes

description: Additional file 6: Supplementary Table S5. Gonadosomatic indexes of female medaka under various temperatures for 6 weeks in Experiment 2.
DOI: 10.15468/dl.bvygk8
title: Occurrence Download

description: A dataset containing 112284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((121.0354 30.89124, 121.8204 30.89124, 121.8204 31.50063, 121.0354 31.50063, 121.0354 30.89124))",
 "Year is greater than or equal to 2000",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 112284 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067097-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26605828.v1
title: Additional file 5 of Variation in responses to photoperiods and temperatures in Japanese medaka from different latitudes

description: Additional file 5: Supplementary Table S4. Gonadosomatic indexes of female medaka under various temperatures for 4 weeks in Experiment 2.
DOI: 10.6084/m9.figshare.26605819
title: Additional file 2 of Variation in responses to photoperiods and temperatures in Japanese medaka from different latitudes

description: Additional file 2: Supplementary Table S1. Collection sites of the medaka populations used in this study.
DOI: 10.6084/m9.figshare.26605828
title: Additional file 5 of Variation in responses to photoperiods and temperatures in Japanese medaka from different latitudes

description: Additional file 5: Supplementary Table S4. Gonadosomatic indexes of female medaka under various temperatures for 4 weeks in Experiment 2.
DOI: 10.25318/3210002401-eng
title: Farm operators classified by farm type and level of educational attainment, Agriculture–Population Linkage, 2016, inactive

description: Agriculture–Population Linkage, 2016. Farm operators classified by farm type and highest level of educational attainment. Farm type is based on the North American Industrial Classification System (NAICS).
DOI: 10.15468/dl.a7ntyt
title: Occurrence Download

description: A dataset containing 12121668 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Ecuador"
 ]
}

 The dataset includes 12121668 records from 2246 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067103-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh0188145.10fu
title: SH0188145.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0188146.10fu
title: SH0188146.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0188147.10fu
title: SH0188147.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0188148.10fu
title: SH0188148.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0188149.10fu
title: SH0188149.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0188150.10fu
title: SH0188150.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0188151.10fu
title: SH0188151.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.7939er
title: Occurrence Download

description: A dataset containing 307 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Chrysomya rufifacies (Macquart, 1844)"
 ]
}

 The dataset includes 307 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081916-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vjxhka
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scaura longula (Lepeletier, 1836)"
 ]
}

 The dataset includes 52 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008196-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5def4o
title: Occurrence Download

description: A dataset containing 145 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyphastrea japonica Yabe & Sugiyama, 1932"
 ]
}

 The dataset includes 145 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031956-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nww63u
title: Occurrence Download

description: A dataset containing 2686993 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-8.17383 4.03962,18.01758 12.72608,18.19336 30.29702,9.58008 37.43997,-5.53711 35.74651,-16.96289 22.26876,-16.96289 12.55456,-8.17383 4.03962))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 1901-2020"
 ]
}

 The dataset includes 2686993 records from 883 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0081905-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nyp3lm
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Uganda",
 "TaxonKey is Gallinago media (Latham, 1787)"
 ]
}

 The dataset includes 30 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008196-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4teh6q
title: Occurrence Download

description: A dataset containing 23200 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-5.05481 36.44426,-5.10754 36.55024,-5.24817 36.78289,-5.15149 36.97272,-5.38 37.14806,-5.7052 37.05693,-5.98645 36.95165,-6.27649 36.89544,-6.39075 36.69837,-6.16223 36.32398,-5.89856 36.16094,-5.6261 36.01889,-5.48547 36.03311,-5.45032 36.17513,-5.31848 36.15384,-5.19543 36.43719,-5.05481 36.44426))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 23200 records from 76 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022339-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z9356w
title: Occurrence Download

description: A dataset containing 15523 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Molossus molossus (Pallas, 1766)"
 ]
}

 The dataset includes 15523 records from 127 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086209-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.45vvfc
title: Occurrence Download

description: A dataset containing 748629 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Korea, Republic of",
 "DatasetKey is EOD – eBird Observation Dataset"
 ]
}

 The dataset includes 748629 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058046-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2swp6e
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neobuxbaumia macrocephala (F.A.C.Weber ex K.Schum.) E.Y.Dawson"
 ]
}

 The dataset includes 123 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008196-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.