cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24208719.v6
title: Chromosome-level genome assembly of the Chinese camelback chiton, Liolophura sinensis

description: Chitons (Polyplacophora) are marine molluscs that can be found worldwide from cold waters to the tropics, and play important ecological roles in the environment. Nevertheless, there remains only two chiton genomes sequenced to date. The chiton Liolophura sinensis is one of the most abundant polyplacophorans found throughout East Asia. Our PacBio HiFi reads and Omni-C sequencing data resulted in a high-quality near chromosome-level genome assembly of ~609 Mb with a scaffold N50 length of 37.34 Mb (96.4% BUSCO). A total of 28,233 genes were predicted, including 28,010 protein-coding genes. The repeat content (27.89%) was similar to the other Chitonidae species and approximately three times lower than in the genome of the Hanleyidae chiton. The genomic resources provided in this work will help to expand our understanding of the evolution of molluscs and the ecological adaptation of chitons.<br><b>Additional Links</b>BioProject PRJNA973839 https://www.ncbi.nlm.nih.gov/bioproject/PRJNA973839Assembly GCA_032854445 https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_032854445/<br>
DOI: 10.6084/m9.figshare.28062602.v3
title: Dataset of reinforcement and width estimation in GMAW weld bead process

description: In the search for smarter and more efficient welding methods, the measurement of the quality of parts is fundamental but limited since, traditionally, it is necessary to destroy samples of a prodution batch to estimate this quality. However, for an online estimation and possible corrections in production, this dataset brings the data result of an attempt to estimate the width and reinforcement of the weld bead through acquisition techniques with thermographic sensors and profilometers on a motorized table and controlled in a GMAW process.
DOI: 10.6084/m9.figshare.7350365.v1
title: The annotation file of Oxygymnocypris stewartii genome for the manuscript "The sequence and de novo assembly of Oxygymnocypris stewartii genome"

description: The annotation file of <i>Oxygymnocypris stewartii</i> genome for the manuscript "The sequence and de novo assembly of <i>Oxygymnocypris stewartii</i> genome"
DOI: 10.17632/fmrnybgxb9
title: NutsBD: An image dataset for classification of Nuts

description: There are ten types of Nut: almond, Brazil nut, cashew, Thai peanut, Vietnam cashew, hazelnut, macadamia, peanut, pistachio, and walnut.
The dataset comprises 1742 images, with over 100 images for each nut type.
DOI: 10.6084/m9.figshare.12553883.v1
title: Garlic cds

description: Garlic cds
DOI: 10.6084/m9.figshare.28881140.v1
title: <b>Solid waste mapping based on very high resolution remote sensing imagery and a novel deep learning approach</b>

description: The urbanization worldwide leads to the rapid increase of solid waste, posing a threat to environment and people’s wellbeing. However, it is challenging to detect solid waste sites with high accuracy due to complex landscape, and very few studies considered solid waste mapping across multi-cities and in large areas. To tackle this issue, this study proposes a novel deep learning model for solid waste mapping from very high resolution remote sensing imagery. By integrating a multi-scale dilated convolutional neural network (CNN) and a Swin-Transformer, both local and global features are aggregated. Experiments in China, India and Mexico indicate that the proposed model achieves high performance with an average accuracy of 90.62%. The novelty lies in the fusion of CNN and Transformer for solid waste mapping in multi-cities without the need for pixel-wise labelled data. Future work would consider more sophisticated methods such as semantic segmentation for fine-grained solid waste classification.<br><br>Our publication is available at https://doi.org/10.1080/10106049.2022.2164361.<br>Our code is available at https://github.com/MrSuperNiu/Remote-Sensing-for-Solid-Waste-mapping.
DOI: 10.6084/m9.figshare.13185038.v1
title: Spread of COVID-19 and Citizens Behaviour_Bangladeshis and Malaysians

description: Spread of COVID-19 and Citizens Behaviour: A Comparison of Importance-Compliance Analyses among Bangladeshis and Malaysians
DOI: 10.6084/m9.figshare.14522766.v1
title: GSE154778

description: Pancreatic ductal adenocarcinoma cells sequenced from humans.<br>
DOI: 10.6084/m9.figshare.20575902.v3
title: Letter of Credence from King George III to Emperor Qianlong (1793)

description: In the <em>Letter of Credence from King George III to Emperor Qianlong</em> (1793), the British king appealed to the Chinese emperor to expand the trade between Britain and China, establish a permanent embassy to the imperial court, and cede a small island for British residence. This letter has two translated Chinese versions. One is the Qing court version, translated by European missionaries serving in the Qing court and collected in <em>Majiaerni fanghua shiliao huibian</em> 马戛尔尼访华史料汇编 [Archives of Lord Macartney’s Embassy to China] (1996, 172-175); the other is the embassy version translated by Catholic priests (H. Wang, 2013b) and kept in the British National Archives (FO 1048/1) (H. Wang, 2020, p. 13).
DOI: 10.6084/m9.figshare.28113608.v1
title: Plos ONE Supplementary documents

description: Dataset during the peak period (for 10 days) and Figures in the manuscript
DOI: 10.6084/m9.figshare.3554670.v1
title: Data Paper. Data Paper

description: File List WE_summary_V2_May2012.csv -- 3444 records (1722 pairs), ASCII text, comma separated. Description The encroachment of woody plants into grasslands, and the conversion of savannas and open woodlands into shrublands, has been widely reported during the past decade. Encroachment has generated considerable interest among ecologists worldwide, but there have been few quantitative syntheses of the effects of encroachment on ecosystem processes across large areas of the globe. Here we summarize the results of observations of the effects of encroachment by woody plants on 111 ecosystem response variables using data obtained from 1722 encroached–unencroached pairs, reported in 160 studies from North and South America, Africa, Europe, Australia, and Asia. We used an extensive review of the literature, including both published and unpublished data, to summarize available data on the effects of a change from open woodland or grassland to shrubland or closed woodland, on richness of plant and animal taxa, soil chemistry, and the status of the soil surface. Our database is restricted to arid, semi-arid, and dry sub-humid environments (drylands) receiving average annual rainfall between 850 and 200 mm. An analysis of the impacts of shrub encroachment on ecosystem structure and function has already been reported using a large subset of these data. This updated data set can provide an opportunity to test further hypotheses about the effects of encroachment on plant and animal communities and on soil processes related to ecosystem functioning. <i>Key words: degradation; desertification; ecosystem processes; encroachment; invasion; shrub; shrubland; thickening; woody.</i>
DOI: 10.15468/dl.jguy69
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argentina silus (Ascanius, 1775)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((44.9648 1.2321,45.9851 1.8496,44.9648 1.8496,44.9648 1.2321))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013343-250525065834625/datasets/export for details.
DOI: 10.17632/k9wn5h72z3
title: Data for: Licensure Provisions, Teen Licensing, and Vehicular Fatalities

description: Data contain vehicular fatalities, licensing, and licensure provisions of those age 16-59. The observations are at the cell level: age, sex, year, and state.
DOI: 10.17632/y25sj2vbnv
title: Dataset for analyzing the impact of minimum wage on low-skilled foreign workers in Malaysian manufacturing sector

description: This file consists of the data on minimum wage and foreign workers in manufacturing sector of Peninsular Malaysia gathered from 297 manufacturing firms.
DOI: 10.6084/m9.figshare.24648945.v1
title: Dataset for numerical analysis

description: This dataset contains one Excel sheet and five Word documents. In this dataset, Simulation.xlsx describes the parameter values used for the numerical analysis based on empirical data. In this Excel sheet, we calculated the values of each capped call-option model parameter. Computation of Table 2.docx and other documents show the results of the comparative statistics.
DOI: 10.6084/m9.figshare.25855471.v1
title: S1;Supplementary Results from The diversity of social complexity in termites

description: Supplementary Figure 1: A plot from DBscan showing how the morphometric traits of 1) hind femur (HF) 2) front tibia (FT) 3) head width (HW) are utilised to predict the number of morphs in a species. This shows two distinct clusters signifying Macrotermes gilvus; small soldiers (left of plots, red) and large soldiers (right of plots, green);The following are the results from analysing the explanatory power of each proximate social complexity trait in turn. FS, functional sterility; OS, obligate sterility; CS, colony size; NC, nest complexity; HM, helper polyphenism.
DOI: 10.6084/m9.figshare.8078633.v2
title: Supplementary_Table_2_RNA-Seq_Mapping_statistics.xlsx

description: Supplementary Table 2. Alignment statistics and information of each analyzed sRNA-Seq dataset.<br>
DOI: 10.17632/65fjp9yymt
title: A gut commensal bacterium promotes mosquito permissiveness to arboviruses

description: Data presented with sequence in the manuscript
DOI: 10.6084/m9.figshare.12442730.v3
title: Tidy Data for Swelling Manuscript

description: All the input and output data that is actually processed with R files within the swelling manuscript.
DOI: 10.6084/m9.figshare.22726568.v1
title: Caribbean corals 3D morphological traits

description: Set of morphological and size traits from 14 Caribbean coral species. Models were obtained <em>ex situ</em> from coral skeletons hosted in collections and <em>in situ</em> from wild colonies. Models were constructed using photogrammetry or scanner.
DOI: 10.17632/7m2872gk28
title: Institutional Specialization (Journal of International Economics)

description: Data and codes used in the paper "Institutional Specialization" by Bernardo Guimaraes and Kevin Sheedy, published in the Journal of International Economics
DOI: 10.17632/jhvj8jd6kv
title: University of Cape Hospital Hepatitis B and C

description: Data from Hepatitis B and C screening at University of Cape Coast Hospital from July to December 2021
DOI: 10.6084/m9.figshare.13332467.v1
title: Complete genome of transconjugant TJ249

description: Complete genome sequence of transconjugant TJ249. <br>TJ249_pac.fasta.zip is read file from PacBio RSII. flye_assmbly.zip is flye output. <br>TJ249_flye_assembly_contig2.gb (IS and AMR genes derived from pSEA2) and TJ249_flye_assembly_contig1.gb (chromosome) are Genbank files for two circular contigs annotated by DFAST (https://dfast.ddbj.nig.ac.jp/).<br>fastq files are available from Sequence Read Archive accession number DRA013462.
DOI: 10.6084/m9.figshare.14644608.v1
title: Bacteria to birds

description: Raw data associated to <b>Metacommunities from bacteria to birds: stronger environmental selection in Mediterranean than in tropical ponds</b>
DOI: 10.6084/m9.figshare.23626833.v1
title: Supplementary Material for: Deep Brain Stimulation for Pediatric Dystonia: Clinicians’ Perspectives on the Most Pressing Ethical Challenges

description: INTRODUCTION. Pediatric deep brain stimulation (pDBS) is commonly used to manage treatment-resistant primary dystonias with favorable results, and more frequently used for secondary dystonia to improve quality of life. There has been little systematic empirical neuroethics research to identify ethical challenges and potential solutions to ensure responsible use of DBS in pediatric populations. METHODS. Clinicians (n=29) who care for minors with treatment-resistant dystonia were interviewed for their perspectives on the most pressing ethical issues in pediatric DBS. RESULTS: Using thematic content analysis to explore salient themes, clinicians identified four pressing concerns: 1) uncertainty about risks and benefits of pDBS (22/29; 72%) that poses a challenge to informed decision making; 2) ethically navigating decision-making roles (15/29; 52%), including how best to integrate perspectives from diverse stakeholders (patient, caregiver, clinician) and how to manage surrogate decisions on behalf of pediatric patients with limited capacity to make autonomous decisions; 3) information scarcity effects on informed consent and decision quality (15/29; 52%) in the context of patient and caregivers’ expectations for treatment; and 4) narrow regulatory status and access (7/29; 24%) such as the lack of FDA approved indications that contribute to decision-making uncertainty and liability and potentially limit access to DBS among patients who may benefit from it. CONCLUSION. These results suggest that clinicians are primarily concerned about ethical limitations of making difficult decisions in the absence of informational, regulatory and financial supports. We discuss two solutions already underway, including supported decision making to address uncertainty, and further data sharing to enhance clinical knowledge and discovery.
DOI: 10.17632/7vpdrbdkd4
title: Images of Nutrient Deficient Banana Plant Leaves

description: Images of Nutrient Deficient leaves of Banana plants.
The dataset created consists of banana leaf images of various categories like Musa acuminata (Dwarf Cavendish), Robusta, Rasthali, Poovan, Monthan, Elakkibale. Images depict deficiency in eight class of nutrients: boron, calcium, iron, potassium, manganese, magnesium, sulphur and zinc. Dataset also contains images of healthy leaves. Machine Learning Models can be developed by researchers and students and train them by using the created banana dataset to obtain high accuracy.
DOI: 10.17632/w9kcc5hz8w
title: Iron isotopic perspective for the material flow from off-axis mantle plume to mid-ocean ridge system

description: Raw data for all figures in the manuscript by Zhang et al. to be published by Geochimica et Cosmochimica Acta as "Iron isotopic perspective for the material flow from off-axis mantle plume to mid-ocean ridge system".
DOI: 10.6084/m9.figshare.1254643.v1
title: CGMS data

description: This is the raw data for the study.
DOI: 10.6084/m9.figshare.15273879.v1
title: pasa2.longest.filter.gff3

description: The annotations and predicted peptides of masked palm civet (<i>Paguma larvata</i>).
DOI: 10.6084/m9.figshare.25234633.v1
title: Datasets and R script

description: A model ectotherm organism (larvae of the European Common Frog) was exposed to two ubiquitous stressors - elevated temperatures resulting from global warming and nitrate pollution - in a crossed experimental design. Health biomarkers were associated to underlying changes in larvae gut bacteria. Bacteria composition and predicted metabolic pathways corroborated faster developed at higher temperatures and reduced body condition under nitrate pollution. Microbiome adjustments seem to have buffered damages to larvae health to a certain extent. However, the highest levels of both stressors culminated in reduced body condition and hampered ability to accelerate development to escape a stressful environment.
DOI: 10.6084/m9.figshare.25808278.v1
title: <b>Unveiling the Dominance of Submarine Groundwater Discharge on Nutrient Sources in the Eastern China Marginal Seas</b>

description: Radium and nutrient data in seawater and groundwater of the Eastern China Marginal Seas
DOI: 10.6084/m9.figshare.7613975.v3
title: Transcriptomic profiling of 39 commonly-used neuroblastoma cell lines

description: RNA-Sequencing STAR read output, count matrix, and FPKM matrix from https://www.nature.com/articles/sdata201733 publication.
DOI: 10.17632/345cvs64g8
title: Supplemental materials of "Differences of Clinical and Laboratory Features between Dipeptidyl Peptidase-4 Inhibitor-Related and Non-Dipeptidyl Peptidase-4 Inhibitor-Related Bullous Pemphigoid: a Systematic Review and Meta-analysis"

description: Supplementary methods, figures, and tables
DOI: 10.17632/fm7cg3z3fj
title: Noise Signature Identification (Ambient Sounds in the University of South Florida, EBII)

description: We recorded the ambient sound of several rooms of the Engineering Building II of the University of South Florida. After filtering the sample to isolate ambient noise, we trained the system using both binary classification -whether or not an audio sample belonged to a specific room- and multi-class classification, which room out of the 19 possible rooms, hallways, entries, and meeting spaces does the audio sample belong to. These files contain the ARFF files used to train and test the models in Weka (https://www.cs.waikato.ac.nz/ml/weka/). They are separated by rooms to the Binary classification, except one for the Multiclass classification.
DOI: 10.17632/hkjt4bfgxz
title: Investigation of Oral Finasteride Enhanced Occipital Hair Diameter Index in Different Types of Male Androgenetic Alopecia

description: Androgenetic Alopecia (AGA) is a condition that causes gradual hair thinning and baldness in certain areas of the scalp. Male Pattern Hair Loss (MPHL) affects the frontotemporal and vertex regions, while Female Pattern Hair Loss (FPHL) presents as diffuse thinning of the central scalp with a preserved hairline. Historically, the occipital region was considered an unaffected area of AGA, leading to little research on the efficacy of alopecia medication in this area. 1 However, recent studies have shown that both MPHL and FPHL can cause changes in the occipital hair and contribute to AGA, highlighting the importance of investigating the effects of drugs like finasteride on the occipital region.This study aimed to fill the gap in real-world scenarios by retrospectively reviewing patients treated with finasteride at our clinic for 6 months or longer. We evaluated the changes in occipital hair thickness and measured various hair parameters under digital trichoscope of MPHL and FPHL patients before and after treatment. Using the Hair Diameter Index to estimate visual hair density range, we were able to quantify the changes observed. The favorable outcome regarding the use of finasteride may provide citable evidence for medication prior to hair transplant surgery.
DOI: 10.26188/13046675.v1
title: Travelling zines pages collection October 2020

description: Zines are typically low-fi, self-published creative works involving original or appropriated content. Each member of the zine project puts a zine into circulation. Once the zine is received, ‘being scicurious’ data is added by the receiver who makes the next zine page, then it is posted onwards to its next scicurious destination. This was a collaborative effort to untangle questions around identity, curiosity and belonging.
DOI: 10.4121/uuid:3926db30-f712-4394-aebc-75976070e91f
title: BPI Challenge 2012

description: Event log of a loan application process
DOI: 10.6084/m9.figshare.25844203.v2
title: EDD datasets

description: The zip file contains three datasets for multivariate time series anomaly detection, namely ETL, SMAP, and MSL.
DOI: 10.6084/m9.figshare.3529610.v1
title: Appendix C. GLMM results from analyses of floral visits to the six focal species.

description: GLMM results from analyses of floral visits to the six focal species.
DOI: 10.17632/6zr48hdjrz
title: Letrozole Pharmacokinetics and Pharmacodynamics in recurrent high grade glioma patients

description: This is the raw data used to generate PK/PD model for letrozole in the Phase 0/1 clinical trial for the high grade glioma patients.
DOI: 10.4121/14075894.v1
title: A co-seismic fault slip distribution for the Mw 7.5 2018 Palu earthquake

description: This dataset contains a finite fault model of the co-seismic slip distribution of the 2018 <i>M<sub>w</sub></i> 7.5 Palu earthquake. This finite fault model was used in the study of post-seismic surface displacements following the 2018 <i>M<sub>w</sub></i> 7.5 Palu earthquake (in Geochemistry, Geophysics, Geosystems entitled: A transient in surface motions dominated by deep afterslip subsequent to a shallow supershear earthquake: the 2018 <i>M<sub>w</sub></i> 7.5 Palu case).<br>This finite fault model was determined as an intermediate result in another study, on the co-seismic surface displacement and tsunami generation by Simons and Broerse et al. which is currently (Februari 2021) in preparation entitled: “A tsunami generated by a strike-slip event: constraints from space geodesy on the 2018 Palu earthquake”. This study combines co-seismic GPS offsets with a multitude of SAR-derived displacement fields in a Bayesian approach to infer the most likely fault slip distribution on a set of fault segments in NW Sulawesi. The surface fault trace dictates the succession of linear fault segments with distinct dip angles that loosely connect to a long segment at depth. This fits well within the tectonic setting of the Palu Valley and Bay area which is characterized as a transtensional basin. In this finite fault model it is assumed that the surface fault trace is continuous in Palu Bay so that those segments north and south of Palu Bay continue offshore with their respective azimuths and connect.
DOI: 10.6084/m9.figshare.24404257.v1
title: EPB script and data

description: Python script used to examine how the marketing of properties explains neighborhood racial and income change using historical public remarks in real estate listings from Multiple Listing Services (MLS) collected and curated by CoreLogic.The primary dataset used for this research consists of 158,253 geocoded real estate listings for single-family homes in Mecklenburg County, North Carolina between 2001 and 2020. The historical MLS data which include public remarks is <b>proprietary</b> and can be obtained through purchase agreement with <b>CoreLogic</b>. The MLS is not publicly available and only available for members of the National Association of Realtors. Public remarks for homes currently listed for sale can be collected from online real estate websites such as Zillow, Trulia, Realtor.com, Redfin, and others.Since we cannot share this data, users need to, before running the script provided here, run the script provided by Nilsson and Delmelle (2023) which can be accessed here: https://doi.org/10.6084/m9.figshare.20493012.v1. This in order to get a fabricated/mock dataset of classified listings called classes_mock.csv. The article associated with Nilsson and Delmelle's (2023) script can be accessed here: https://www.tandfonline.com/doi/abs/10.1080/13658816.2023.2209803<br>The user can then run the code together with the data provided here to estimate the threshold models together with data derived from the publicly available HMDA data. To compile a historical data set of loan/application records (LAR) for the user's own study are, the user will need to download data from the following websites:https://ffiec.cfpb.gov/data-publication/snapshot-national-loan-level-dataset/2022 (2017-forward)https://www.ffiec.gov/hmda/hmdaproducts.htm (2007-2016)https://catalog.archives.gov/search-within/2456161?limit=20&levelOfDescription=fileUnit&sort=naId:asc (for data prior to 2007)
DOI: 10.6084/m9.figshare.24465799.v1
title: <b>Exploring the Potential Role of Oxidative Stress-Related Genes in Colorectal Cancer Recurrence and Establishing a Recurrence Assessment System Based on Single-Cell and Bulk RNA-seq Analysis</b>

description: None.