cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.t29vgr
title: Occurrence Download

description: A dataset containing 1644 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mushrooms Flora of Nepal at Natural History Museum"
 ]
}

 The dataset includes 1644 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0169253-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dclmzx
title: Occurrence Download

description: A dataset containing 245 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ambystoma bombypellum Taylor, 1940"
 ]
}

 The dataset includes 245 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018084-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.76tpgt
title: Occurrence Download

description: A dataset containing 69907 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lanius meridionalis Temminck, 1820"
 ]
}

 The dataset includes 69907 records from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0190820-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.drfgxr
title: Occurrence Download

description: A dataset containing 2285 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hemigrapsus takanoi Asakura & Watanabe, 2005)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2285 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049078-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.odvqit
title: Occurrence Download

description: A dataset containing 6582 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Caretta caretta (Linnaeus, 1758)",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 6582 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018086-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.crzthx
title: Occurrence Download

description: A dataset containing 2919 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phoenicoparrus andinus (Philippi, 1854)"
 ]
}

 The dataset includes 2919 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0184356-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hvjhlb
title: Occurrence Download

description: A dataset containing 586 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Megascops albogularis (Cassin, 1849)"
 ]
}

 The dataset includes 586 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018086-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6e2k5d
title: Occurrence Download

description: A dataset containing 499653 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lanius excubitor Linnaeus, 1758"
 ]
}

 The dataset includes 499653 records from 372 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0190818-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tctrel
title: Occurrence Download

description: A dataset containing 830 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ambystoma dumerilii (Dugès, 1870)"
 ]
}

 The dataset includes 830 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018086-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qa6qht
title: Occurrence Download

description: A dataset containing 20588036 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Mexico"
 ]
}

 The dataset includes 20588036 records from 3039 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0204201-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4qcknv
title: Occurrence Download

description: A dataset containing 40549 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Leptinotarsa decemlineata (Say, 1824)"
 ]
}

 The dataset includes 40549 records from 349 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013266-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3667492_d2.v1
title: Additional file 2: of Medical complexity and time to lung cancer treatment – a three-year retrospective chart review

description: Medical complexity and time to lung cancer treatment. (DO 25 kb)
DOI: 10.6084/m9.figshare.c.3667492_d2
title: Additional file 2: of Medical complexity and time to lung cancer treatment – a three-year retrospective chart review

description: Medical complexity and time to lung cancer treatment. (DO 25 kb)
DOI: 10.6084/m9.figshare.c.3667489_d3
title: Additional file 2: of Screening for potential genes associated with bone overgrowth after mid-shaft femur fracture in a rat model

description: Significant protein interactions in the PPI network.á (XLS 39Â kb)
DOI: 10.6084/m9.figshare.c.3667504_d2
title: Additional file 1: of MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integration

description: “Using MultiDataSet with third party R packages”. This file illustrates how to perform an integration analysis using multivariate co-inertia analysis (omicade4) and clustering of multiples tables (iClusterPlus). (ZIP 38 kb)
DOI: 10.6084/m9.figshare.c.3667504_d3
title: Additional file 3: of MultiDataSet: an R package for encapsulating multiple data sets with application to omic data integration

description: “Adding a new type of data to MultiDataSet objects”. This file exemplifies how to create a method to incorporate data from S4 classes to a MultiDataSet object. (HTML 66 kb)
DOI: 10.6084/m9.figshare.c.3667528_d2.v1
title: Additional file 2: Table S2. of The effect of cigarette smoking on the oral and nasal microbiota

description: Comparison by smoking status in alpha diversity and relative abundance of top ten abundant genera. Table S3. P values based on the Wilcoxon signed-rank test for the Shannon index differences among eight oral sites. (XLS 50 kb)
DOI: 10.6084/m9.figshare.c.3667528_d2
title: Additional file 2: Table S2. of The effect of cigarette smoking on the oral and nasal microbiota

description: Comparison by smoking status in alpha diversity and relative abundance of top ten abundant genera. Table S3. P values based on the Wilcoxon signed-rank test for the Shannon index differences among eight oral sites. (XLS 50 kb)
DOI: 10.6084/m9.figshare.c.3667537_d1
title: Additional file 2: of Deciphering composition and function of the root microbiome of a legume plant

description: Sample name, experiment, barcode sequences, and sequence counts of the Trifolium root and soil samples and the simplified community and soil extract microcosm experiments. (XLSX 47 kb)
DOI: 10.6084/m9.figshare.c.3667537_d1.v1
title: Additional file 2: of Deciphering composition and function of the root microbiome of a legume plant

description: Sample name, experiment, barcode sequences, and sequence counts of the Trifolium root and soil samples and the simplified community and soil extract microcosm experiments. (XLSX 47 kb)
DOI: 10.6084/m9.figshare.c.3667537_d4
title: Additional file 4: of Deciphering composition and function of the root microbiome of a legume plant

description: R code and necessary input files needed to replicate all statistical analyses and reproduce R-generated figures. (RAR 2550 kb)
DOI: 10.6084/m9.figshare.c.3667537_d5.v1
title: Additional file 3: of Deciphering composition and function of the root microbiome of a legume plant

description: Command line code and necessary input files needed to replicate bioinformatic analysis. (RAR 145 kb)
DOI: 10.6084/m9.figshare.c.3667537_d5
title: Additional file 3: of Deciphering composition and function of the root microbiome of a legume plant

description: Command line code and necessary input files needed to replicate bioinformatic analysis. (RAR 145 kb)
DOI: 10.6084/m9.figshare.c.3667570_d1.v1
title: MOESM2 of Real-time inverse kinematics for the upper limb: a model-based algorithm using segment orientations

description: Additional file 2. Marker sets defined for the study.
DOI: 10.6084/m9.figshare.c.3667573_d1.v1
title: Additional file 2: of Empirical assessment of analysis workflows for differential expression analysis of human samples using RNA-Seq

description: Table of genes differentially expressed between nonclassical and classical monocytes in four reference studies, identified using limma and SAM, and their intersections with each other and annotated features in GRCh37. (XLSX 2721 kb)
DOI: 10.6084/m9.figshare.c.3667573_d5.v1
title: Additional file 1: of Empirical assessment of analysis workflows for differential expression analysis of human samples using RNA-Seq

description: Table of software tools, with versions and runtime parameters. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3667573_d5
title: Additional file 1: of Empirical assessment of analysis workflows for differential expression analysis of human samples using RNA-Seq

description: Table of software tools, with versions and runtime parameters. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.c.3667573_d8.v1
title: Additional file 7: of Empirical assessment of analysis workflows for differential expression analysis of human samples using RNA-Seq

description: Interactive figure of comparison of performance metrics. (a) Absolute precision and recall for each workflow. (b) Relative ranks of precision and recall for each workflow. (XLSX 688 kb)
DOI: 10.6084/m9.figshare.c.3667573_d8
title: Additional file 7: of Empirical assessment of analysis workflows for differential expression analysis of human samples using RNA-Seq

description: Interactive figure of comparison of performance metrics. (a) Absolute precision and recall for each workflow. (b) Relative ranks of precision and recall for each workflow. (XLSX 688 kb)
DOI: 10.6084/m9.figshare.c.3667594_d7.v1
title: Additional file 1: of Improved genome sequencing using an engineered transposase

description: Starting sequencing for transposase Tn5. (TXT 608 bytes)
DOI: 10.6084/m9.figshare.c.3667594_d7
title: Additional file 1: of Improved genome sequencing using an engineered transposase

description: Starting sequencing for transposase Tn5. (TXT 608 bytes)
DOI: 10.15468/dl.cc5v3q
title: Occurrence Download

description: A dataset containing 977813 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Birda - Global Observation Dataset"
 ]
}

 The dataset includes 977813 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038044-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3668731_d1.v1
title: Additional file 4: of Medium throughput bisulfite sequencing for accurate detection of 5-methylcytosine and 5-hydroxymethylcytosine

description: Primers used for amplification of genomic DNA in oxBS experiments (Fig. 4). (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3668731_d1
title: Additional file 4: of Medium throughput bisulfite sequencing for accurate detection of 5-methylcytosine and 5-hydroxymethylcytosine

description: Primers used for amplification of genomic DNA in oxBS experiments (Fig. 4). (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3668728_d1.v1
title: MOESM6 of The antineoplastic drug, trastuzumab, dysregulates metabolism in iPSC-derived cardiomyocytes

description: Additional file 6: Table S4. Gene ontology enrichment analysis of lapatinib induced differentially expressed genes in iPSC dervied cardiomyocytes.
DOI: 10.6084/m9.figshare.c.3668728_d6.v1
title: MOESM7 of The antineoplastic drug, trastuzumab, dysregulates metabolism in iPSC-derived cardiomyocytes

description: Additional file 7: Table S5. Gene ontology enrichment analysis of trastuzumab induced differentially expressed genes in iPSC dervied cardiomyocytes.
DOI: 10.6084/m9.figshare.c.3668728_d6
title: MOESM7 of The antineoplastic drug, trastuzumab, dysregulates metabolism in iPSC-derived cardiomyocytes

description: Additional file 7: Table S5. Gene ontology enrichment analysis of trastuzumab induced differentially expressed genes in iPSC dervied cardiomyocytes.
DOI: 10.6084/m9.figshare.c.3668758_d1.v1
title: Additional file 4: of Genome-wide standing variation facilitates long-term response to bidirectional selection for antibody response in chickens

description: List of SNP marker names and genome locations. (TXT 3 kb)
DOI: 10.6084/m9.figshare.c.3668770_d1.v1
title: Additional file 1: of A novel reflex cough testing device

description: Modified reflex cough test and videofluoroscopy test. The 49 patients without previous pneumonia were classified as group A, and 21 with such a history comprised group B. Additionally, 10 healthy volunteers participated in the clinical study as the control group. The peak cough flow (PCF) of the induced cough and time until cough reflex was measured with the spirometer. Dysphasia was evaluated for the patients by VFSS. (XLSX 54Â kb)
DOI: 10.15468/dl.56mrzm
title: Occurrence Download

description: A dataset containing 261 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Living Specimen, Occurrence evidence, Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Panthera onca (Linnaeus, 1758)",
 "Year 1952-2024"
 ]
}

 The dataset includes 261 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038084-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3668731_d6
title: Additional file 3: of Medium throughput bisulfite sequencing for accurate detection of 5-methylcytosine and 5-hydroxymethylcytosine

description: Primers used for amplification of genomic DNA using NEXTERA XT and targeted BS-Seq (Fig. 3). (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3668770_d1
title: Additional file 1: of A novel reflex cough testing device

description: Modified reflex cough test and videofluoroscopy test. The 49 patients without previous pneumonia were classified as group A, and 21 with such a history comprised group B. Additionally, 10 healthy volunteers participated in the clinical study as the control group. The peak cough flow (PCF) of the induced cough and time until cough reflex was measured with the spirometer. Dysphasia was evaluated for the patients by VFSS. (XLSX 54Â kb)
DOI: 10.6084/m9.figshare.c.3668731_d7.v1
title: Additional file 7: of Medium throughput bisulfite sequencing for accurate detection of 5-methylcytosine and 5-hydroxymethylcytosine

description: csv sample running sheet. (CSV 19 kb)
DOI: 10.6084/m9.figshare.c.3668773_d1.v1
title: Additional file 2: Table S1. of CNVs into the wild: screening the genomes of conifer trees (Picea spp.) reveals fewer gene copy number variations in hybrids and links to adaptation

description: Distribution of the gene CNVs along the spruce genetic map with position in cM. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.c.3668731_d7
title: Additional file 7: of Medium throughput bisulfite sequencing for accurate detection of 5-methylcytosine and 5-hydroxymethylcytosine

description: csv sample running sheet. (CSV 19 kb)
DOI: 10.6084/m9.figshare.c.3668773_d1
title: Additional file 2: Table S1. of CNVs into the wild: screening the genomes of conifer trees (Picea spp.) reveals fewer gene copy number variations in hybrids and links to adaptation

description: Distribution of the gene CNVs along the spruce genetic map with position in cM. (XLSX 15Â kb)
DOI: 10.5281/zenodo.14503083
title: Breast Tissue Changes following Denosumab in Healthy Premenopausal Women with Dense Breasts

description: These are spatial transcriptomics raw datas (transcripts with spatial coordinates, corresponding DAPI image in tif format)
DOI: 10.5281/zenodo.14503084
title: Breast Tissue Changes following Denosumab in Healthy Premenopausal Women with Dense Breasts

description: These are spatial transcriptomics raw datas (transcripts with spatial coordinates, corresponding DAPI image in tif format)
DOI: 10.5281/zenodo.14510250
title: Breast Tissue Changes following Denosumab in Healthy Premenopausal Women with Dense Breasts

description: These are spatial transcriptomics raw datas (transcripts with spatial coordinates, corresponding DAPI image in tif format)
DOI: 10.5281/zenodo.14511008
title: Breast Tissue Changes following Denosumab in Healthy Premenopausal Women with Dense Breasts

description: These are spatial transcriptomics raw datas (transcripts with spatial coordinates, corresponding DAPI image in tif format)
DOI: 10.6084/m9.figshare.c.3668758_d7.v1
title: Additional file 2: of Genome-wide standing variation facilitates long-term response to bidirectional selection for antibody response in chickens

description: List of GO Biological Process enrichment. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3668788_d3.v1
title: Additional file 7: of Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants

description: DEGs in each biological process category related to seed germination. (XLSX 83 kb)
DOI: 10.6084/m9.figshare.c.3668797_d2
title: Additional file 7: Table S7. of Conserved gene expression in sperm reservoirs between birds and mammals in response to mating

description: Differentially expressed genes (mating vs control) with permutation test in chicken. (XLSX 17Â kb)
DOI: 10.6084/m9.figshare.c.3668797_d3.v1
title: Additional file 3: Table S3. of Conserved gene expression in sperm reservoirs between birds and mammals in response to mating

description: Differentially expressed genes in the UTJ of mated sows compared to control. (XLSX 205Â kb)
DOI: 10.6084/m9.figshare.c.3668788_d3
title: Additional file 7: of Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants

description: DEGs in each biological process category related to seed germination. (XLSX 83 kb)
DOI: 10.6084/m9.figshare.c.3668788_d4.v1
title: Additional file 3: of Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants

description: All DEGs when comparing each germination stage individually in two LPA mutants. (XLSX 6334 kb)
DOI: 10.6084/m9.figshare.c.3668797_d3
title: Additional file 3: Table S3. of Conserved gene expression in sperm reservoirs between birds and mammals in response to mating

description: Differentially expressed genes in the UTJ of mated sows compared to control. (XLSX 205Â kb)
DOI: 10.6084/m9.figshare.c.3668788_d4
title: Additional file 3: of Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants

description: All DEGs when comparing each germination stage individually in two LPA mutants. (XLSX 6334 kb)
DOI: 10.6084/m9.figshare.c.3668797_d4.v1
title: Additional file 1: Table S1. of Conserved gene expression in sperm reservoirs between birds and mammals in response to mating

description: Differentially expressed genes in the UVJ of mated hens compared to control. (XLSX 42Â kb)
DOI: 10.6084/m9.figshare.c.3668797_d4
title: Additional file 1: Table S1. of Conserved gene expression in sperm reservoirs between birds and mammals in response to mating

description: Differentially expressed genes in the UVJ of mated hens compared to control. (XLSX 42Â kb)
DOI: 10.6084/m9.figshare.c.3668788_d5.v1
title: Additional file 9: of Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants

description: Special DEGs with FPKM valueâ  &gt;100 in each contrast libraries. (XLSX 191 kb)
DOI: 10.6084/m9.figshare.c.3668797_d5.v1
title: Additional file 4: Table S4. of Conserved gene expression in sperm reservoirs between birds and mammals in response to mating

description: Differentially expressed genes in the UTJ of sperm-free SP-inseminated sows compared to control. (XLSX 135Â kb)
DOI: 10.6084/m9.figshare.c.3668788_d5
title: Additional file 9: of Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants

description: Special DEGs with FPKM valueâ  &gt;100 in each contrast libraries. (XLSX 191 kb)
DOI: 10.6084/m9.figshare.c.3668797_d5
title: Additional file 4: Table S4. of Conserved gene expression in sperm reservoirs between birds and mammals in response to mating

description: Differentially expressed genes in the UTJ of sperm-free SP-inseminated sows compared to control. (XLSX 135Â kb)
DOI: 10.6084/m9.figshare.c.3668806_d2.v1
title: Additional file 6: of An SNP-based saturated genetic map and QTL analysis of fruit-related traits in Zucchini using Genotyping-by-sequencing

description: List of genes underlying the significant QTLs involved in vine, flowering and fruit traits variation annotated in the last version of the C. pepo genome (v 3.2) available [13]. (XLSX 146 kb)
DOI: 10.6084/m9.figshare.28050008
title: Parkia timoriana raw GC-MS files

description: Metabolite extraction from Parkia timoriana seeds
DOI: 10.6084/m9.figshare.28050008.v1
title: Parkia timoriana raw GC-MS files

description: Metabolite extraction from Parkia timoriana seeds
DOI: 10.6084/m9.figshare.c.3668797_d7.v1
title: Additional file 10: Table S10. of Conserved gene expression in sperm reservoirs between birds and mammals in response to mating

description: Differentially expressed genes (mating vs control) with permutation test in pig. (XLSX 16Â kb)
DOI: 10.6084/m9.figshare.c.3668797_d7
title: Additional file 10: Table S10. of Conserved gene expression in sperm reservoirs between birds and mammals in response to mating

description: Differentially expressed genes (mating vs control) with permutation test in pig. (XLSX 16Â kb)
DOI: 10.6084/m9.figshare.c.3668788_d9.v1
title: Additional file 5: of Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants

description: Enriched GO terms in the TW-1-M and TW-1 libraries. (XLSX 1127 kb)
DOI: 10.6084/m9.figshare.c.3668788_d9
title: Additional file 5: of Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants

description: Enriched GO terms in the TW-1-M and TW-1 libraries. (XLSX 1127 kb)