cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28693121.v1
title: The CLIP-seq analyses of the motifs in the EV71 genome interacted with HSPA8 protein.

description: Crosslinking-immunoprecipitation and high-throughput sequencing (CLIP-Seq)At least 2 × 107 cells are needed for each repeated experiment. Vero cells were infected with mock or EV71(MOI=1) for 12 h. Then the cells were washed with cold phosphate-buffered saline (PBS) and irradiated twice at UV254 (600mJ/cm2) in a Stratalinker crosslinker (Stratagene) on ice. Cells were collected with CLIP lysis buffer containing 0.5mM DTT and EDTA-free protease inhibitor cocktail and incubated on ice for 20min then centrifuged at 14,000 × g for 15min at 4 °C and transferred supernatant into a new centrifuge tube. For immunoprecipitation procedure, the supernatant was incubated with HSPA8 antibody or IgG antibody overnight at 4 °C. The next day, the system was further incubated with Protein A/G magnetic beads for 4h at 4 °C. Afterwards, the beads were washed twice with IP wash buffer (50mM HEPES-KOH, 300mM KCl, 0.05% (v/v) NP40, 0.5mMDTT, complete EDTA-free protease inhibitor cocktail (Roche), pH 7.5) and then incubated at 37 °C for 30min and at ice for 5min. To elute protein-RNA adducts, beads were resuspended in NuPAGE SDS-PAGE loading buffer and incubated at 72 °C for 10 min, and then separated on Novex NuPAGE 10% Bis-Tris gels (Invitrogen) and transferred to nitrocellulose membranes (Amersham). For extraction of RNA-protein complexes, themembrane was treated with proteinase K buffer (100mM Tris pH7.5, 10mMEDTA, 50mMNaCl, 1% SDS, 4mg/ml proteinase K) at 55 °C for 30min with constant agitation. An equal volume of phenol: chloroform: isoamylalcohol (125:24:1) to RNA was added and precipitated with 1 μl glycogen at −20 °C for 6 h and then centrifuged at 19,000 × g for 30min at 4 °C then discarded the supernatant. The precipitate was washed twice with 75% ethanol and resuspended with 10 μl RNase-free water. The recovered RNA was used to perform high-throughput sequencing using Illumina P5 adapter and cDNA libraries were then sequenced by using DNBSEQ-T7 sequencer (MGI Tech Co., Ltd. China) under the help of Seqhealth Technology Co., LTD (Wuhan, China). This study adopted traditional methods like Multiple EM for Motif Elicitation (MEME) to discover the sequence consensus of HSPA8 binding sites in EV71 genomic RNA.<br>
DOI: 10.6084/m9.figshare.22559803.v1
title: Chemical, mineral and Pb isotopic compositions of the hydrothermal ferromanganese oxides obtained from a petit-spot volcano and related materials

description: The dataset consists of the bulk chemical and mineral compositions of hydrothermal ferromanganese oxides obtained from a petit-spot volcano in the western North Pacific Ocean and Pb isotopic compositions of the hydrothermal ferromanganese oxides, present hydrogenetic ferromanganese crusts and lavas of petit-spot volcanoes in the western North Pacific Ocean. The bulk chemical analysis was performed using X-ray fluorescence spectrometry (Primus II, Rigaku, Tokyo, Japan) and inductively coupled plasma mass spectrometry (ICP–MS; iCAP-Q, Thermo Fisher Scientific, Bremen, Germany) at The University of Tokyo. Pb isotopic analysis was performed using a multicollector ICP–MS (Neptune Plus, Thermo Fisher Scientific, Bremen, Germany) at Chiba Institute of Technology. The details of the samples and the analytical methods are shown in the reference article.
DOI: 10.6084/m9.figshare.3829947.v2
title: Mamajek 18: An Over-Density in Sco-Cen at D = 175 pc

description: Between the famous Upper Sco OB subgroup of Sco-Cen, and the Lupus and CrA star-forming complexes, lies a region of young (~10 Myr-old) stars at d ~ 100-200 parsecs dubbed "Lower Sco". Within the Lower Sco subregion of Sco-Cen is a very strong over-density of pre-main sequence stars which may be a candidate open cluster (indexed as "Mamajek 18"). High resolution optical spectroscopy of dozens of X-ray-emitting stars in this group were taken with the MIKE spectrograph on the Magellan Clay 6.5-m telescope in July 2007, and low-resolution spectra taken with the SMARTS 1.5-m in 2010, revealing most of the stars to be Li-rich FGK pre-MS stars. The median radial velocity of the 18 Li-rich stars in this clump is +1.7+-1.0 km/s. <br><br>Cross-referencing the candidate pre-MS stars in this cluster with the Gaia DR1 data (http://www.cosmos.esa.int/web/gaia/dr1; Gaia collaboration and Brown et al. 2016, A&A, in press, http://www.aanda.org/articles/aa/pdf/forth/aa29512-16.pdf) shows that the cluster stars have mean proper motion pmRA, pmDec = -12.2, -21.7 (+-0.3, 0.4) mas/yr. The clipped Gaia DR1 mean parallax of these stars is 5.73+-0.3 mas (approximate distance 175+-9 pc; dominated by systematic parallax error 0.3 mas). The resultant space motion for the group is U,V,W = -3.9, -19.9, -4.2 (+-1.0, 0.9, 0.6) km/s, with total heliocentric space motion 20.7+-0.6 km/s - similar to the other subgroups of Sco-Cen.<br> <br><br><br>
DOI: 10.11583/dtu.19689049.v1
title: Onshore wind generation time series for technology SP335 HH200 at resource grade C (PECD 2021 update)

description: This data (csv file) provides simulated hourly time series of onshore wind generation with specific power (SP) 335 W/m2 turbines at hub height (HH) of 200 m for the regions shown in the attached map. The analysed wind power plants are sited at the 50 % lowest mean wind speed locations in each region, i.e., in resource grade (RG) C. The map shows the resulting capacity factors (annual mean). The Excel file gives a rough indication if this wind technology is suitable for the different regions for this RG or not. The available land considers all onshore land area of a region, except lakes, cities, and very high elevation locations. The possible impact of any existing onshore wind installations in the region is not considered. Wake losses are modeled, with additional 5 % of other losses and unavailability considered. The time stamps are in GMT; the variable (column) names relate to the region names shown in the maps. The data include also country-level aggregations, e.g., UK00 is the aggregated onshore wind generation of all the UK regions (weighted by regional installed capacities). The data are part of the variable renewable energy generation time series created for ENTSO-E in the 2021 update of the Pan-European Climate Database (PECD) dataset. ENTSO-E has used the data in ERAA 2021 and Winter Outlook 2021-2022 assessments, and they are used in TYNDP 2022. The simulations are carried out by DTU Wind Energy, with the future technology selection and data validation discussed and agreed with ENTSO-E and its members. The linked journal paper (1st link) describes the simulation methodology (combination of ERA5 and GWA data is used). It is requested that the paper is cited when the data are used. The linked related journal paper (2nd link) describes the concept of resource grades and how they can be applied in energy system analyses. This item is part of a larger collection of wind and solar data: https://doi.org/10.11583/DTU.c.5939581
DOI: 10.6084/m9.figshare.23557506.v1
title: Network representations of populations in Aotearoa NZ

description: We provide example networks for use with the contagion on a bipartite network (cobin) repository. One large network is built from a synthetic population of the whole of Aotearoa New Zealand (about 5 million individuals) and one subnetwork represents Territorial Authority 76 (Auckland, about 1.5 million individuals). For these networks we have taken the following steps to anonymise the vaccination data: <br> 1. We have changed the dates of each vaccination by up to one week. <br> 2. For the large NZ network we have assigned vaccinations to individuals based on their TA (location) and age only. There is no ethnic or SA2-level location information in the assignment of vaccinations.<br> 3. For the small and medium subnetworks we assigned vaccinations based on their age only. Vaccine data is provided by the New Zealand Ministry of Health and aggregated breakdowns are available on their website.
DOI: 10.6084/m9.figshare.26156944.v4
title: Artifact for "Better Not Together: Staged Solving for Context-Free Language Reachability"

description: This is the official artifact of our ISSTA'24 paper "Better Not Together: Staged Solving for Context-Free Language Reachability".
DOI: 10.6084/m9.figshare.24312439.v2
title: Primeros textos que reunieron las ideas iniciales de la Tesis Doctoral en el primer seminario de fundamentación, mayo 6 de 2019

description: El archivo PDF contiene tres documentos que corresponden a los primeros textos que reunieron las ideas iniciales de la tesis doctoral titulada: «De la formación universitaria al ejercicio profesional en la industria aeroespacial». Estos textos fueron presentados en el primer seminario de fundamentación el 6 de mayo de 2019 en el Programa de Doctorado en Educación de la Universidad de La Sabana. En los escritos se destaca la importancia de la formación integral ciudadana y la colaboración entre instituciones educativas y empresas para promover el desarrollo de la sociedad y el cuidado de la naturaleza, utilizando una metodología de intervención basada en la investigación y la gestión.El primer texto, expone la declaración institucional realizada en una de las clases del seminario de fundamentación. El segundo texto, esboza las ideas que guiaron la tesis doctoral. Y, el tercer texto, consiste en un modelo que forma parte de una metodología de intervención que busca establecer vínculos entre la institución educativa y la empresa con el objetivo de aportar al desarrollo personal en las comunidades.
DOI: 10.6084/m9.figshare.28519811.v3
title: Research Document for Threat Hunting

description: THis research comparing hunt query quality crafted by human using Gemini and without Gemini focus on threat hunting
DOI: 10.6084/m9.figshare.6790604.v1
title: train_feature.hdf5.part3

description: Part 3/3 of training features
DOI: 10.6084/m9.figshare.7231202.v1
title: Citrine Thermal Conductivity Data

description: Thermal conductivity of 872 compounds measured experimentally and retrieved from Citrine database from various references. The reported values are measured at various temperatures of which 295 are at room temperature.<br>Available as Monty Encoder encoded JSON and as CSV. Recommended access method for these particular files is with the matminer Python package using the datasets module.<br><br>Note on citations: If you found this dataset useful and would like to cite it in your work, please be sure to cite Citrine Informatics and their citrination client rather than or in addition to this page.<br>
DOI: 10.6084/m9.figshare.4204824.v1
title: Recording Data

description: Eye movement recordings
DOI: 10.6084/m9.figshare.28758875.v1
title: Daily Daka

description: The the ongoing digital transformation has accelerated the use of internet technologies in language interpreting education. However, in contrast to various studies on online interpreting teaching in class, research on the out-of-class line is limited. This study addressed this gap by exploring an effective online interpreting format for Chinese BTI(Bachelor of Translation and Interpreting) undergraduates out of their regular scheduled classes. The Daily Daka assignments have been proposed, in which students are required to complete a certain amount of interpreting practices daily within defined criteria and a designated timeframe through active participation in a virtual community. A quasi-experimental comparison design was used to test their feasibility and effectiveness. Sixty third-year BTI undergraduates from a Chinese university participated in the study.
DOI: 10.6084/m9.figshare.24486523.v1
title: Supplementary Material for: Short-term versus long-term mentalization-based therapy for borderline personality disorder: a randomized clinical trial (MBT-RCT)

description: Introduction Borderline personality disorder (BPD) is a prevalent psychiatric disorder. Mentalization-based therapy (MBT) is an evidence-based intervention, and several countries offer long-term treatments for BPD, which is resource demanding. No previous trial has compared short-term with long-term MBT. Objective To assess the efficacy and safety of short-term versus long-term MBT for outpatients with BPD. Methods Adult outpatients (≥18 years) with subthreshold or diagnosed BPD were randomly assigned (1:1) to short-term MBT (5 months) or long-term MBT (14 months) using a web-based system. The primary outcome was BPD symptoms assessed with the Zanarini Rating Scale for Borderline Personality Disorder. Secondary outcomes were functional impairment, quality of life, global functioning, and severe self-harm. All outcomes were primarily assessed at 16 months after randomization. This trial was prospectively registered at ClinicalTrials.gov, NCT03677037. Results Between October 4, 2018, and December 3, 2020, we randomly assigned 166 participants to short-term MBT (n=84) or long-term MBT (n=82). Regression analyses showed no evidence of a difference when assessing BPD symptoms (MD 0.99; 95% CI -1.06 to 3.03; p = 0.341), level of functioning (MD 1.44; 95% CI -1.43 to 4.32; p = 0.321), quality of life (MD -0.91; 95% CI -4.62 to 2.79; p = 0.626), global functioning (MD -2.25; 95% CI -6.70 to 2.20; p = 0.318), or severe self-harm (RR 1.37; 95% CI 0.70 to 2.84; p = 0.335). More participants in the long-term MBT group had a serious adverse event compared with short-term MBT (RR 1.63; 95% CI 0.94 to 3.07; p = 0.088) primarily driven by a difference in psychiatric hospitalizations (RR 2.03; 95% CI 0.99 to 5.09; p = 0.056). Conclusion Long-term MBT did not lead to lower levels of BPD symptoms, nor did it influence any of the secondary outcomes compared with short-term MBT.
DOI: 10.6084/m9.figshare.11559528.v1
title: Student Stress Survey Jan2020 OPENDATA.xlsx

description: Questions and raw data of a survey evaluating stress in postgraduate university students in the UK. Students were from a wide range of disciplines, included home and international. Survey asks about how stressed they feel, academic causes and other causes of stress, and how they cope.
DOI: 10.6084/m9.figshare.21624294.v1
title: Development And Validation of The Traumatized Self-Identity Scale (TSIS): Adopting a Narrative Psychology Approach to Trauma

description: this is dataset of participants responding to TSIS and also other scales needed for convergebt validity. <br> the study is about developing a traumatized self-identity scale.
DOI: 10.6084/m9.figshare.25429396.v1
title: super resolution of historical Landsat images

description: The dataset provides annual images of Beijing, Shanghai, Wuhan, and Urumuqi from 1985 to 2015 at a resolution of 10 meters, created by enhancing the resolution of historical Landsat satellite images. It represents the first consistent high-resolution remote sensing archive spanning 30 years. This dataset offers a unique opportunity for researchers to observe and analyze the changes in these cities over this period. It is of significant importance for studies in urban planning, land use, environmental monitoring, and related fields.
DOI: 10.6084/m9.figshare.26094232.v2
title: Source data.xlsx

description: We report a smart nanoplatform fabricated using a pH-sensitive triblock copolymer synthesized by reversible addition-fragmentation chain transfer polymerization enabling in situtumor vaccination and tumor-associated macrophages (TAMs) polarization.
DOI: 10.6084/m9.figshare.978486.v2
title: WPressClient Source Code

description: WPressClient is an open source workload generator. The complete source code is available in this page for all researches and businesses. For more information you can contact me by amir0015@e.ntu.edu.sg.
DOI: 10.6084/m9.figshare.24375226.v1
title: Charge-reversed Exosomes for Targeted Gene Delivery to Cartilage for Osteoarthritis Treatment

description: Raw data and statistics analysis for the figures and tables
DOI: 10.6084/m9.figshare.3553314.v1
title: Appendix A. Diagram of hypothesized species interactions in the presence of nonnative bullfrogs and mosquitofish.

description: Diagram of hypothesized species interactions in the presence of nonnative bullfrogs and mosquitofish.
DOI: 10.6084/m9.figshare.13011458.v1
title: MALDI-MSMS of lysoPAF and Spermidine

description: MS/MS data from standards and on-tissue MALDI-MS/MS
DOI: 10.6084/m9.figshare.24316339.v1
title: Neural.zip

description: Datasets of MOFs for predicting the mechanical properties of MOFs.
DOI: 10.6084/m9.figshare.25406197.v1
title: Elsafty_RBCs_Slide_15

description: Each one of (Elsafty_RBCs_Slide_1-25) contains the field images/patches of a specific slide/patient. The names of the patches start with the respective slide/patient number, followed by the unique patch/field number. There is a total of 47,363 patches with 1076x535 pixels size from the 25 slides/patients, the counts of patches per slide/patient are as follows: 1690, 1709, 2697, 2400, 1905, 1803, 2964, 3049, 2464, 2080, 1894, 1852, 2590, 2263, 3328, 983, 1066, 935, 1131, 1237, 1874, 1393, 1277, 1199, and 1580.
DOI: 10.6084/m9.figshare.11902125.v1
title: Mosquitoes Bioacoustic Features - A Public Dataset

description: The dataset provides 34 features that can be used to identify the three species of mosquitoes.The wing-beats sounds produced by three species of mosquitoes, such as: Aedes Aegypti, Culex Quinquefasciatus & Pipiens and Culiseta, in flapping wing flight, were collected in the real world environment, and in lab conditions.
DOI: 10.6084/m9.figshare.11907249.v3
title: The Histoire ancienne jusqu'à César: Alignment (The Values of French)

description: <i>Alignment</i> maps the contents of a number of key manuscripts of the<i> Histoire ancienne jusqu'à César</i>, the earliest universal chronicle in French. The manuscripts are aligned to the paragraph division of the <i>Histoire ancienne</i> in Paris, Bibliothèque nationale de France, MS f. fr. 20125.<br><br>The latest version of the <i>Alignment</i> dataset can be visualised on<i>The Values of French </i>website: https://tvof.ac.uk/histoire-ancienne/alignment (available until 2030).<br><i>Alignment</i> is an output of the ERC-funded project <i>The Values of French Language and Literature in the European Middle Ages</i> (<i>TVOF</i>) (EU Horizon 2020, grant agreement no. 670726), directed by Prof. Simon Gaunt (PI) and hosted by the Department of French, King's College London. For more information, visit https://tvof.ac.uk/ (available until 2030).
DOI: 10.6084/m9.figshare.25623504.v1
title: Supplementary Material for: End-of-life care for newborn infants. A multicenter real life prospective study

description: Introduction
Most neonatal deaths in industrialized countries follow a process of redirection of care. The objectives of this study were to describe how neonates die in a middle-income country, whether there was redirection of care, and the reason for this decision. 
Methods
Prospective, multicenter, cross-sectional study. Neonates who died in the delivery room (DR) or in the neonatal intensive care unit (NICU) in 97 Hospitals over a 6-month period were included. After each neonatal death, one investigator interviewed a member of the healthcare team who had been involved in the end-of-life care process. Perinatal data, conditions that led to death, whether there was redirection of care, and details of the end-of-life process were recorded.
Results
Data from 697 neonatal deaths were analyzed, which represent 80% of the total deaths occurring in Argentina in that period. The main causes of death were complications of prematurity (47%) and congenital anomalies (27%). Overall, 32% of neonates died after a process of redirection of care, and this was less frequent in the NICU (28%) than in the DR (70%, p &lt; 0.001). The reasons for withholding/ withdrawing care were inevitable death (75%) and severe compromise of expected quality of life (25%). Redirection of care consisted in withhold therapies in 66%, and withdrawal in 34%. A diagnosis of a major congenital anomaly increased the odds of redirection of care (OR 5.45; 95%CI 3.59-8.27). 
Conclusion
Most neonates who die in Argentina do so while receiving full support. Redirection of care mainly follows a condition of inevitable death.
DOI: 10.6084/m9.figshare.16751995.v2
title: Supplemental Tables

description: RT-qPCR gene and refseq, and results
DOI: 10.6084/m9.figshare.3495710.v1
title: The North Wind and the Sun: syllable nuclei annotations. - Seeking temporal predictability in speech: Comparing statistical approaches on 18 world languages.

description: Data accompanying the article<br><br>"Seeking temporal predictability in speech: Comparing statistical approaches on 18 world languages." by Yannick Jadoul, Andrea Ravignani, Bill Thompson, Piera Filippi and Bart de Boer, published in Frontiers in Human Neuroscience<br><br><br>
DOI: 10.25381/cput.27645033.v1
title: Independence and performance of internal audit functions within Zimbabwean state universities

description: 2020FOBREC798This mixed methods research collected data using questionnaires and interview guides. 279 questionnaire responses were collected from auditees. 11 chief internal auditors were interviewed. The data was collected in the year 2022. The research title was "Independence and Performance of Internal Audit Functions in State Universities.".
DOI: 10.6084/m9.figshare.14464965.v1
title: Supplementary Material for: Outcomes of Interleukin-2 Receptor Antagonist Induction Therapy in Standard-Risk Renal Transplant Recipients Maintained on Tacrolimus: A Systematic Review and Meta-Analysis

description: <b><i>Introduction:</i></b> The additive benefit of interleukin-2 receptor antagonist (IL2-RA) induction in standard-risk kidney transplant recipients, while maintained on tacrolimus-based immunosuppressive therapy, is uncertain. <b><i>Methods:</i></b> We divided the studies included in this meta-analysis into 2 groups: group A (included studies that used same dose of tacrolimus in both arms of each study) and group B (included studies that compared patients who received induction therapy and low-dose tacrolimus vs. those who received no-induction therapy and high dose of tacrolimus). <b><i>Results:</i></b> In group A, 11 studies were included (<i>n</i> = 2,886). IL2-RA induction therapy was not associated with significant differences in comparison to no-induction therapy in terms of acute rejection rates at 6 months post-transplant (risk ratio = 1.12 and 95% confidence interval [CI] range: 0.94–1.35) or graft survival at 1 year post-transplant (risk ratio = 0.78 and 95% CI range: 0.45–1.36). In group B, 2 studies were included (<i>n</i> = 669). There was no difference between both arms in terms of acute rejection rates (risk ratio = 0.62, with 95% CI range: 0.33–1.14) or graft survival (risk ratio = 1 and 95% CI range: 0.57–1.74). <b><i>Conclusion:</i></b> IL2-RA induction therapy does not improve outcomes in patients maintained on tacrolimus-based immunotherapy in standard-risk population.
DOI: 10.6084/m9.figshare.15147642.v2
title: Turkish Variome

description: Turkish Variome contains allele frequencies of 46,739,479 variants of 3,362 unrelated Turkish individuals.<br>Turkish reference panel for imputation contains phased haplotypes of 773 whole-genome sequenced unrelated Turkish individuals.
DOI: 10.6084/m9.figshare.12268031.v1
title: Brain weights for no-brainer network

description: Brain weights for MRI<br>
DOI: 10.6084/m9.figshare.19435340.v1
title: Dreadnoughtus Elbow Model 1

description: This is the simulation file (Adams MSC) for <i>Dreadnoughtus </i>with our first reconstruction of articular cartilage.
DOI: 10.6084/m9.figshare.24025734.v3
title: Testing the roles of time, diversification rates and niche conservatism in shaping the inverse latitudinal diversity gradient of Potentilla (Rosaceae).

description: Supplementary Materials for: Testing the roles of time, diversification rates and niche conservatism in shaping the inverse latitudinal diversity gradient of <i>Potentilla</i> (Rosaceae)
DOI: 10.6084/m9.figshare.19690639.v1
title: mizuRoute_global_ancillary_data

description: Ancillary data to run mizuRoute in global setting