cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/hytsjn9zbv
title: Degradation of nuclear and mitochondrial DNA after gamma-irradiation and its effect on forensic genotyping

description: Forensic genotyping can be impeded by gamma-irradiation of biological evidence in the event of radiological crime. Oxidative effects within the mitochondria elicit greater damage to mitochondrial DNA (mtDNA) than nuclear DNA (nuDNA) at low doses. This study presents a novel approach for the assessment of nuDNA versus mtDNA damage from a comparison of genotype and quantity data, while exploring likely mechanisms for differential damage after high doses of gamma-irradiation. Liquid (hydrated) and dried (dehydrated) whole blood samples were exposed to high doses of gamma-radiation (1-50 kilogray, kGy). The GlobalFiler PCR Amplification Kit was used to evaluate short tandem repeat (STR) genotyping efficacy and nuDNA degradation; a comparison was made to mtDNA degradation measured using real-time PCR assays. Each assay was normalised before comparison by calculation of integrity indices relative to unirradiated controls. For nuDNA, a subset of autosomal STR markers were selected for relative size consistency with three mtDNA targets (86, 190 and 452 bp), including loci of low molecular weight (D2S441, ~75-110 bp), intermediate molecular weight (vWA and D1S1656, ~150-210 bp), and high molecular weight (TPOX and SE33, ~310-450 bp). For STR size groups containing multiple loci, the average peak heights of alleles for each marker were determined. Integrity indices were calculated from the peak height or quantity ratios of increasing amplicon size difference, comprising intermediate/short (Index A), long/intermediate (Index B), and long/short loci (Index C). Full STR profiles were attainable up to the highest dose, although DNA degradation was noticeable after 10 and 25 kGy for hydrated and dehydrated blood, respectively. This was manifested by heterozygote imbalance more than allele dropout. Degradation was greater for mtDNA than nuDNA, as well as for hydrated than dehydrated cells, after equivalent doses. Findings suggest that oxidative effects due to water radiolysis and mitochondrial function are dominant mechanisms of differential damage to nuDNA versus mtDNA after high-dose gamma-irradiation. While differential DNA damage was reduced by cell desiccation, its persistence after drying indicates innate differences between nuDNA and mtDNA radioresistance and/or continued oxidative effects within the mitochondria. Degradation of mtDNA is more severe after gamma-irradiation than nuDNA; this does not adversely impact on genotyping success of blood samples up to 50 kGy.
DOI: 10.6084/m9.figshare.24369043.v1
title: Annotation result of Orobanche coerulescens

description: Annotation result of Orobanche coerulescens
DOI: 10.17632/txwmkdkdr7
title: Bifunctional transcription factor GhMYB4 orchestrates transition from elongation to secondary cell wall synthesis tradeoff in cotton fiber. Lu Qiao ea al.

description: Origin blot images of the manuscript (Bifunctional transcription factor GhMYB4 orchestrates transition from elongation to secondary cell wall synthesis tradeoff in cotton fiber).
DOI: 10.6084/m9.figshare.12028806.v3
title: A dataset of freeze-thaw erosion evaluation in Tibet based on cloud model, 1998-2013

description: 1. Freeze-thaw erosion calculation results of Tibet in 1998-2013.rarThis is the freeze-thaw erosion calculation results of Tibet Plateau using the improved AHP method based on cloud model in 1998-2013.2. Reclassified freeze-thaw erosion calculation results of Tibet in 1998,2003,2008 and 2013.rarThis is the reclassified freeze-thaw erosion calculation results of Tibet Plateau using the improved AHP method based on cloud model in 1998, 2003, 2008 and 2013.<br>3. Freeze-thaw erosion maps of Tibet in 1998-2013.rarThis is the freeze-thaw erosion maps based on calculation results of Tibet Plateau using the improved AHP method with cloud model in 1998-2013.<br>
DOI: 10.6084/m9.figshare.27612375.v2
title: Supplementary Material for: Prevalence of frailty in the TIA clinic and its associations with mortality

description: Introduction
Frailty is a clinical syndrome of increased vulnerability to stressors. Frailty is associated with adverse outcomes after stroke, but frailty and transient ischaemic attack (TIA) are less well described.
Methods
Retrospective analysis of patients referred by the emergency department (ED) to TIA clinic (01/01/2016-12/03/2022), linked to hospital records for electronic follow-up. Only those with Clinical Frailty Scale (CFS) recorded within two weeks of clinic were included. Prevalence of frailty was determined based on CFS score &gt;4. Hazard ratios (HR) for mortality were determined through Cox proportional hazard regression, adjusted for prognostic factors. Where repeat CFS data were available, temporal change in frailty was recorded (~15 months).
Results
Of 1185 patients included, 53.5% (n=634) had frailty. Patients with frailty tended to be older (median age 81 vs 74 years, p&lt;0.001) and female (53.9% vs 39.9% p&lt;0.001). Of 335 diagnosed with TIA following review, 61.2% (n=205) were frail. Prevalence of frailty by clinic diagnosis was: TIA 61.2% (205/335); stroke 46.7% (128/274); other diagnoses 52.3% (301/575). In TIA patients and the whole cohort (WC), frailty (TIA:HR:2.69 [95%CI:1.23-5.87, p=0.013], WC:2.58 [95%CI:1.64-4.08, p&lt;0.001]) and increasing age [HR:1.07 95%CI:1.04-1.12], were predictive of mortality. In stroke patients, only increasing age was predictive of death (HR:1.11 [95%CI:1.04-1.19, p=0.003]). Of 414 patients with repeat CFS, median interval 15 months, median change was +1 point (IQR:0-2).
Conclusion
Frailty is common in TIA and becomes more common following TIA. Strength of association of frailty with poor outcome was greater for TIA patients than for those with stroke. Routine assessment of frailty may be a useful addition to TIA services.
DOI: 10.17632/49vktf47fg
title: Locations of anemometers of the ASOS network in the contiguous USA

description: A .CSV file containing the accurate locations and WMO exposure class of 830 anemometers in the ASOS network across the contiguous United States of America.
A full description of the methodology and the key to the contents of this file are given in the article: Locating the anemometers of the US ASOS network and classifying their local shelter, published in Weather, DOI: 10.1002/wea.4131
DOI: 10.6084/m9.figshare.25904785.v2
title: Data and analysis files

description: In this study, we raised crickets on four diets that differed in macronutrient availability: high lipid, high carb, high protein, and a control diet. For the first two weeks of our experiment, we collected weights, number of eggs laid, and survivorship. After two weeks, half of the crickets received an immune challenge while the others received a sham challenge. For the next week, we measured survivorship and egg-laying. Finally, we measured their lytic activity to examine the effect of diet and immune challenges.The file "MacroDataOrg" is our full dataset, including the raw data as it was collected and any/all transformations that we completed prior to analysis. The Excel file has several sheets, which are briefly explained below:Weight: Shows the weight for each individual in the experiment, at the start of our experiment (roughly 1 week post-adult molt), week 1 of our experiment, week 2 of our experiment, and week 3 of our experiment (after the immune challenge). The individual's diet group is noted in the "Individual ID."EggCount: Shows the egg count for each individual in the experiment, at week 1 of our experiment, week 2 of our experiment, and week 3 of our experiment (after the immune challenge). The individual's diet group is noted in the "Individual ID."Survivorship: In columns A-C, shows the total number of days that each individual lived during our experiment (started approximately one week post-adult molt) and the number of days they lived after the immune challenge; in columns E-I, the data is converted to show what proportion of crickets in each diet treatment were alive on each day of the experiment (this converted data was used to produce Figure 5).Lytic Activity: Shows the individual ID (including diet group), immune challenge status, and calculated lytic activity for each individualAssay Wells: Shows the data from the plate reader, including absorbance readings for each cell at each minute of the lytic assay; below (in rows 73-92), it shows the layout of each plateDiet Macronutrient: Shows the compiled nutrition information for each component of the diets (high lipid, high protein, high carbohydrate, and control), as well as the calculations that we used to compile Tables 1 and 2The file "Data Sheet" was used for all ANOVA analyses, as well as making the figures. It is referenced and used in the attached R scripts "ANOVA Script" and "Figures Script." The data was formatted differently for survivorship analyses, which is saved in "Survivorship Data" and referenced and used in the R script "SurvivorshipAnalysis Script."
DOI: 10.6084/m9.figshare.28302356.v1
title: Data for a research paper entitled "<b>Sustainable Circular Supplier Selection using Hybrid Multi-Criteria Decision-Making M</b>Raw<b>odel in Semiconductor Industry</b>"

description: Data for a research paper entitled "<b>Sustainable Circular Supplier Selection using Hybrid Multi-Criteria Decision-Making M</b>Raw<b>odel in Semiconductor Industry</b>"
DOI: 10.17632/7dkhr88t3s
title: Anti-Inflammatory Potential of Goldenberry-Derived Exosome-Like Nanoparticles (GDEN) in Macrophage Polarization

description: Abstract under review: Overpopulated M1 macrophages can trigger chronic inflammation. Plant-derived exosome-like nanoparticles have been reported to show beneficial bioactivities. Aim To isolate PDEN from goldenberry fruits and evaluate its anti-inflammatory potential in macrophage polarization. Methods GDEN were isolated by centrifugation and precipitation methods. LPS-induced RAW 264.7 cells were treated with GDEN before being evaluated with NO production assay and flow cytometry of CD80 and CD209. Results GDEN averaged 227,7 nm in size and spherical shape. GDEN 40 µg/mL decreased NO production in LPS-induced cells. Flow cytometry showed that CD209 (M2 marker) positive cells were up-regulated after being treated with 20 µg/mL GDEN. Conclusion GDEN showed anti-inflammatory potential through the ability to reduce M1 macrophages product and promote M2 polarization. Files consist of: 1. BCA assay: Raw data and standard curve for BCA assays in determining GDEN concentration. 2. MTT assay: Raw data and analysis for cell viability after being treated with GDEN or LPS. 3. NO assay for LPS only: Raw data and analysis of LPS-induced cells NO production. Data consists of standard curve, absorbance to NO concentration conversion, and approximate calculation for NO production per cell. 4. NO assay for LPS+GDEN: Raw data and analysis of LPS-induced cell NO production after being treated with GDEN in various concentrations. Data consists of standard curve, absorbance to NO concentration conversion, and approximate calculation for NO production per cell. 5. FC CD80 and CD209: Raw data and analysis of CD80 and CD209 flow cytometry results.
DOI: 10.17632/8phmy565nk
title: Dataset containing mouse brain sections with dopaminergic neuronal soma manually annotated

description: This cell annotation dataset consists of 114 8-bit RGB images with associated 16-bit cell label images. The label images consist of a total of 18193 manually labeled tyrosine hydroxylase positive cells. For the label images, each cell area is assigned a pixel value in the range of 1 to n, where n is the total number of labeled cells in a label image. Since the label images are in 16-bit, it may appear black and pre-processing (for example, adjusting brightness/contrast) is needed to see the cells. For all the images, the image resolution is 0.46 microns per pixel.
DOI: 10.17632/j55j9z4mfp
title: Data for: Cerium-doped indium oxide transparent electrode for semi-transparent perovskite and perovskite / silicon tandem solar cells

description: The initial data of all the experimental data in this paper are given in this document. Readers can double-click into the Origin program for analysis.
DOI: 10.17632/s2cswmb7kx
title: Botswana trade openness and economic growth data

description: Trade openness indicators [trade to GDP ratio OPEN1; exports to GDP (OPEN 2); imports to GDP (OPEN 3); composite index of openness (OPEN 4), which is constructed from residuals of OPEN1 = f(GDP per capita growth, pop1564; arable area]; economic growth (GDP per capita growth); investment to gdp ratio; government consumption expenditure to GDP ratio ; financial development (M2/GDP ratio); inflation rate; population aged 15 - 64; ratio of arable area to total land area.
DOI: 10.17632/5rzns5zwxv
title: Continental thermal blanketing explains the compositional dichotomy of the diffuse basaltic province across central-eastern Asia

description: This dataset includes (1) Ar-Ar dating of the Change basalts; (2) major- and (3) trace-element and Sr-Nd-Pb isotope systematics of the Chaoge basalts and (4) compiled element and isotopic data for Cretaceous-Cenozoic basaltic rocks across the central-eastern Asia continent
DOI: 10.17632/gtfy4xm9gm
title: Data for: Stacking fault energy, thermal expansion behavior, and elastic coefficients of a single-crystalline CrFeNi medium-entropy alloy

description: In this compilation of data, we report the dilatation behavior, temperature dependence of elastic stiffness coefficients and the intrinsic stacking fault energy at room temperature of the single crystalline, equiatomic, and single-phase FCC CrFeNi medium-entropy alloy. All the data are either origin files (.opju) or excel files (.xlsx). Here is a short description of the files, which are numbered according to their order of appearance in the corresponding research article:
Fig.2: Dilatation behavior between 100 and 673 K 
Fig.3: Temperature dependence of the elastic parameters between 100 and 673 K, including c11, c12, c44, C=(c11+c12+c44)/3, c’ = (c11-c12)/2, Anisotropy factor (A), Bulk modulus (B), shear modulus (G), Young modulus (E), Poisson's ratio (ν), normalized Cauchy pressure (c12-c44)/C and Pugh's index (B/G).
Fig.4: Plots showing the separation distance between Shockley partials as a function of the angle between the dislocation line and the perfect Burgers vector. These data allow to determine the stacking fault energy of the equiatomic CrFeNi alloy.
DOI: 10.6084/m9.figshare.4055544.v1
title: Supplemental data 1.xls

description: Table of the results given by HPLC analysis of the samples. Key: Rt, retention time; +, presence of peak; -, absence of peak.
DOI: 10.17632/db8p7ryc2n
title: Supplemental material: Varied treatment patterns among patients with palmoplantar pustulosis (PPP): A claims-based cohort study using data from two large US databases

description: Supplemental material for JAAD International research letter "Varied treatment patterns among patients with palmoplantar pustulosis (PPP): A claims-based cohort study using data from two large US databases"
DOI: 10.17632/2d3r233cm7
title: Data For Smart City dimensions : Applying DEMATEL

description: DEMATEL helps to rank the alternatives between the main and sub-dimensions of any decision-problem. Although, the ranking is not the only choice point as, via DEMATEL the causer and receiver relations are also to be revealed, helping decision-maker in predicting the importance of the dimensions of the main subjects.
DOI: 10.17632/pyzcsbm75t
title: Antibiotic Properties of Isolated Endophytic Fungi Extracts from Davidson County Community College Campus Flora

description: These collective data are from projects conducted by the first group of undergraduate research fellows and their advisor at Davidson County Community College (DCCC) in Thomasville, North Carolina. All projects were conducted within a framework of endophytic fungi isolation and testing of organic extracts for antibiotic properties. Individual plant specimens representing 10 species were collected on the college campus. Various tissues were surface sterilized, and then plated on either potato dextrose or yeast-malt extract agar containing kanamycin (50 µg/mL) to inhibit bacterial growth followed by storage at room temperature. Plates were checked regularly for fungal growth and further subsampled and re-plated in an attempt to isolate endophytic fungi. Once a fungus appeared to be isolated, sterilized scalpels were used to remove small strips of agar from a plate and were placed in sterile 15mL conical centrifuge tubes containing sterile water or 250mL flasks containing various type of broth. The 15mL tubes are permanent water stock cultures and are currently stored on the DCCC campus. The 250 mL flasks were used for initial fermentation cultures that were allowed to grow under ambient room conditions with occasional mixing before transfer into 1,000 mL flasks containing more broth. Those flasks were allowed to grow for several weeks with occasional mixing under ambient room conditions before being subjected to organic extraction. Organic extraction consisted of separation of organic and aqueous phases with ethyl acetate. The resulting organic phase was placed in a modified distillation apparatus as there was no access to a rotary evaporator. The ethyl acetate was evaporated off and recollected in a receiving flask and the organic residue remaining from the extraction was collected and stored in methanol in a laboratory freezer until being tested for antibacterial properties. Extracts were tested against four species of bacteria (Escherichia coli, Staphylococcus epidermidis, Bacillus subtilis, and Klebsiella (Enterobacter) aerogenes) using the agar diffusion method in 1:10 potato dextrose: nutrient agar. Plates were inoculated by submerging sterile cotton swabs in fresh broth cultures of a species and subsequent swabbing of agar’s surface. Wells were constructed using sterilized 10mm diameter cuvettes and then filled with 25 µL of extract, or of control (+ kanamycin, - methanol) solutions. Plates were incubated at species appropriate temperatures for 24 hours followed by removal and the measurement (mm) of the zones of inhibition around each well. All testing was done in triplicate. Due to limited time and space, only five organic extractions were completed. Of the five, subsequent statistical analyses indicated four extracts had inhibitory effects against two species, B. subtilis and S. epidermidis while no inhibitory effects against E. coli or K. aerogenes were observed.
DOI: 10.6084/m9.figshare.26771809.v1
title: Data set

description: This dataset contains examples of customer reviews of three hotels.The study is in Excel format and consists of three pages. Each page contains forty comments about the hotel. There are 120 sample hotel reviews in total.
DOI: 10.17632/6vjvg6c5k6
title: data-unveiling-womnes-intimate-hair-removal

description: The primary aim of this study is to investigate the depilation practices pertaining to intimate areas among women in Poland. By discerning the risk factors linked to complications arising from hair removal, the study endeavors to identify individuals at an elevated risk of encountering such complications and subsequently formulate recommendations for secure grooming practices.
DOI: 10.17632/hxhmm7mbfw
title: Data for: Tensile Property Prediction by Feature Engineering Guided Machine Learning in Reduced Activation Ferritic/Martensitic Steels

description: the original dataset from references and the modified dataset for the mechanical properties of RAFM steels
DOI: 10.17632/t22nnn385k
title: Soil microbial functional gene dataset associated with Agathis australis

description: Kauri (Agathis australis) is a significant and iconic native tree of Aotearoa, New Zealand. A Phytophthora infection known as the kauri-dieback disease is currently destroying kauri trees. Studies have revealed that soil microorganisms can positively impact the plant immune system. These microorganisms compete with pathogens for nutrients, thereby hindering pathogen colonization. Moreover, the root microbiome is a complex system of diverse microbes with their own genetic elements and interactions that can have an impact on plant health. 
Investigating and evaluating the genetic aspects of microorganisms that impact the diversity of microbial populations is a pivotal area of emphasis in ecological research. The GeoChip 5.0M (Glomics Inc., USA) is a microarray-based metagenomic tool that specifically characterizes the functional gene profile of soil microbial diversity. It includes 1,447 gene families from a range of microorganisms, including archaea, bacteria, fungi, protists, algae, and viruses.
The Auckland Botanical Gardens in Aotearoa, New Zealand is maintained by the local council, and it features kauri trees in three distinct garden areas: native forest, kauri grove, and rose garden. The native forest is designed to simulate a natural forest setting with indigenous trees and New Zealand native plants. Kauri grove has around 100 kauri trees that are approximately 20 years old. 
Soil samples were collected from four cardinal points of each stand at 10cm depth.  The CTAB hot phenol-chloroform DNA extraction method was used to recover DNA from the soil. The pooled environmental DNA (eDNA) recovered from all four cardinal points were pooled and sent to Glomics Inc. USA for the microarray analysis. 
There were 946 genes and 4342 taxa identified from the pooled eDNA. This data offers valuable insight into the functional genes linked to kauri soil, serving as a useful foundation for future microbiome analyses of kauri soil in forest-scale studies.
Data table header descriptions
Unique ID 	- 	Probe ID
ProtienGI 	- 	GI number of protein sequence accessible through the NCBI search
AccessionNo 	- 	NCBI accession number for the sequence	
Gene 		- 	The name of the gene detected
Species 		-	The organism the gene derives from
Lineage 	-	The phylogenetic information of the organism
Gene category 	- 	The categories according to gene functions
Subcategory1	- 	Coarse division of gene categories
Subcategory2 	-	Fine division of gene categories
Samples 	- 	NF1 (Native Forest tree 1), NF2 (Native Forest tree 2), KG3 (Kauri grove tree 
			3), KG5 (Kauri grove tree 5).
Values 		- 	Normalized signal intensity
DOI: 10.17632/mcfzjhftrt
title: Research Into Potential Therapies Against COVID-19, With Focus On Ivermectin

description: This data that submitted to your system contains majority of drugs and therapies that till now accepted for administration during COVID-19 outbreak. All of them analyzed and evaluated through studies and researches that published in Journals. We searched for articles on MedRxiv, PubMed, Google Scholar, MEDLINE, EMBASE using the appropriate search terms. Available clinical trials evaluating the effectiveness of Ivermectin were searched for on ClinicalTrials.gov. Also, we use the EU Clinical Trials Register and ANZ clinical trials registry data too.
DOI: 10.17632/f5tzr98b5g
title: Central bank digital currency payment adoption dataset

description: Central bank digital currency payment adoption dataset
DOI: 10.17632/ps37nk4zj6
title: The global and Chinese burden of acne
DOI: 10.17632/xkzgr9s5xw
title: LCSC VOC Idaho Dairy Farm Smoke and Comparison Dataset 2019-2022

description: This dataset contains VOC measurements in ambient air and smoke during wildfire events on a Moscow, Idaho dairy farm compared to two other Idaho cities, Lewiston and Boise. From 2019 to 2022, Tenax TA sorbent tubes were used to passively sample the sites weekly, followed by quantification of 21 VOCs via thermal desorption-gas chromatography-mass spectrometry (TD-GC-MS), including benzene (a human carcinogen), toluene, ethylbenzene and xylenes (BTEX).