cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1406040.10fu
title: SH1406040.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1406044.10fu
title: SH1406044.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1406047.10fu
title: SH1406047.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1406048.10fu
title: SH1406048.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1406049.10fu
title: SH1406049.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1406050.10fu
title: SH1406050.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1406052.10fu
title: SH1406052.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.6084/m9.figshare.31056630
title: Exploring the mechanism of <i>Rhodiola kirilowii</i> (Regel) Maxim regulating PPARG/PTGS2 to alleviate LPS-induced acute lung injury in mice based on UPLC-Q-TOF-MS<sup>E</sup> combined with system pharmacology

description: This article investigates how <i>Rhodiola kirilowii</i> (Regel) Maxim (RK) treats acute lung injury (ALI) by analysing its chemical components with UPLC-Q-TOF-MSE. We use databases and software to screen components, identify disease and component targets, create Venn diagrams, map protein-protein interaction networks, conduct GO and KEGG enrichment analyses, and build a “component-target-pathway” network to uncover functional interactions and pathways. Molecular docking was performed using AutoDock Vina to identify the primary active components of RK therapy for ALI and their target sites, followed by visualisation using PyMOL software. A mouse ALI model was developed using LPS injection, confirmed <i>via in vivo</i> experiments. Database screening identified 18 active compounds and 62 potential targets for RK in ALI treatment. Liquiritin showed strong binding to PPARG and PTGS2. Animal experiments indicated that liquiritin improved LPS-induced lung injury and inflammation in ALI mice. RK may alleviate LPS-induced acute lung injury in mice by inhibiting the TLR4/MYD88/NF-κB pathway and regulating PPARG and PTGS2 expression.
DOI: 10.6084/m9.figshare.31056630.v1
title: Exploring the mechanism of <i>Rhodiola kirilowii</i> (Regel) Maxim regulating PPARG/PTGS2 to alleviate LPS-induced acute lung injury in mice based on UPLC-Q-TOF-MS<sup>E</sup> combined with system pharmacology

description: This article investigates how <i>Rhodiola kirilowii</i> (Regel) Maxim (RK) treats acute lung injury (ALI) by analysing its chemical components with UPLC-Q-TOF-MSE. We use databases and software to screen components, identify disease and component targets, create Venn diagrams, map protein-protein interaction networks, conduct GO and KEGG enrichment analyses, and build a “component-target-pathway” network to uncover functional interactions and pathways. Molecular docking was performed using AutoDock Vina to identify the primary active components of RK therapy for ALI and their target sites, followed by visualisation using PyMOL software. A mouse ALI model was developed using LPS injection, confirmed <i>via in vivo</i> experiments. Database screening identified 18 active compounds and 62 potential targets for RK in ALI treatment. Liquiritin showed strong binding to PPARG and PTGS2. Animal experiments indicated that liquiritin improved LPS-induced lung injury and inflammation in ALI mice. RK may alleviate LPS-induced acute lung injury in mice by inhibiting the TLR4/MYD88/NF-κB pathway and regulating PPARG and PTGS2 expression.
DOI: 10.15156/bio/sh1406053.10fu
title: SH1406053.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.ubu53v
title: Occurrence Download

description: A dataset containing 186 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lozania klugii (Mansf.) Mansf."
 ]
}

 The dataset includes 186 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010423-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vpxumr
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Human Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lophopappus tarapacanus"
 ]
}

 The dataset includes 18 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025210-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5nz3cp
title: Occurrence Download

description: A dataset containing 12096 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Coffea arabica"
 ]
}

 The dataset includes 12096 records from 381 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025209-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17182/hepdata.151650.v1/t4
title: "Ratios 4" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: Antiparticle-to-particle yield ratio, 30-50% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.152376.v1/t16
title: "Table 16" of "Observation of medium-induced yield enhancement and acoplanarity broadening of low-$p_\mathrm{T}$ jets from measurements in pp and central Pb$-$Pb collisions at $\sqrt{s_{\rm NN}}=5.02$ TeV"

description: $\Delta_\mathrm{recoil} (p_\mathrm{T,ch jet})$ for $R=$ 0.2, for various $\mathrm{TT_{sig}}$ selections in Pb--Pb collisions at $\sqrt{s_\mathrm{NN}}=5.02$ TeV.
description: The ALICE Collaboration reports measurements of the semi-inclusive distribution of charged-particle jets recoiling from a high transverse momentum (high $p_\mathrm{T}$) charged hadron, in pp and central Pb--Pb collisions at center of mass energy per nucleon--nucleon collision $\sqrt{s_\mathrm{NN}}=5.02$ TeV. The large uncorrelated background in central Pb--Pb collisions is corrected using a data-driven statistical approach, which enables precise measurement of recoil jet distributions over a broad range in $p_\mathrm{T,ch jet}$ and jet resolution parameter $R$. Recoil jet yields are reported for $R=$ 0.2, 0.4, and 0.5 in the range $7
DOI: 10.17182/hepdata.152376.v1/t17
title: "Table 17" of "Observation of medium-induced yield enhancement and acoplanarity broadening of low-$p_\mathrm{T}$ jets from measurements in pp and central Pb$-$Pb collisions at $\sqrt{s_{\rm NN}}=5.02$ TeV"

description: $\Delta_\mathrm{recoil} (p_\mathrm{T,ch jet})$ for $R=$ 0.4, for various $\mathrm{TT_{sig}}$ selections in Pb--Pb collisions at $\sqrt{s_\mathrm{NN}}=5.02$ TeV.
description: The ALICE Collaboration reports measurements of the semi-inclusive distribution of charged-particle jets recoiling from a high transverse momentum (high $p_\mathrm{T}$) charged hadron, in pp and central Pb--Pb collisions at center of mass energy per nucleon--nucleon collision $\sqrt{s_\mathrm{NN}}=5.02$ TeV. The large uncorrelated background in central Pb--Pb collisions is corrected using a data-driven statistical approach, which enables precise measurement of recoil jet distributions over a broad range in $p_\mathrm{T,ch jet}$ and jet resolution parameter $R$. Recoil jet yields are reported for $R=$ 0.2, 0.4, and 0.5 in the range $7
DOI: 10.17182/hepdata.151650.v1/t10
title: "Covariance matrix, muQ vs. muB, 4" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: Covariance matrix of the centrality-uncorrelated uncertainties on $\mu_Q$ and $\mu_B$, extracted with the Thermal-FIST code, in the 30-50% centrality class
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t11
title: "Covariance matrix, muQ vs. muB, 5" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: Covariance matrix of the centrality-uncorrelated uncertainties on $\mu_Q$ and $\mu_B$, extracted with the Thermal-FIST code, in the 50-90% centrality class
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t12
title: "Baryon chemical potential, muB" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: Baryon chemical potentials, $\mu_B$, extracted with the Thermal-FIST code, in the 0-90% centrality interval
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t13
title: "Pion ratio 1" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $p_{\mathrm{T}}$-differential $\pi^{-}/\pi^{+}$ antiparticle-to-particle yield ratio, 0-5% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t14
title: "Pion ratio 2" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $p_{\mathrm{T}}$-differential $\pi^{-}/\pi^{+}$ antiparticle-to-particle yield ratio, 5-10% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t5
title: "Ratios 5" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: Antiparticle-to-particle yield ratio, 50-90% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t6
title: "Chemical potentials, muQ and muB" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: Electric-charge and baryon chemical potentials, $\mu_Q$ and $\mu_B$, extracted with the Thermal-FIST code, in the 0-5%, 5-10%, 10-30%, 30-50%, and 50-90% centrality classes
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t7
title: "Covariance matrix, muQ vs. muB, 1" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: Covariance matrix of the centrality-uncorrelated uncertainties on $\mu_Q$ and $\mu_B$, extracted with the Thermal-FIST code, in the 0-5% centrality class
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t8
title: "Covariance matrix, muQ vs. muB, 2" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: Covariance matrix of the centrality-uncorrelated uncertainties on $\mu_Q$ and $\mu_B$, extracted with the Thermal-FIST code, in the 5-10% centrality class
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t9
title: "Covariance matrix, muQ vs. muB, 3" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: Covariance matrix of the centrality-uncorrelated uncertainties on $\mu_Q$ and $\mu_B$, extracted with the Thermal-FIST code, in the 10-30% centrality class
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t15
title: "Pion ratio 3" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $p_{\mathrm{T}}$-differential $\pi^{-}/\pi^{+}$ antiparticle-to-particle yield ratio, 10-30% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t16
title: "Pion ratio 4" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $p_{\mathrm{T}}$-differential $\pi^{-}/\pi^{+}$ antiparticle-to-particle yield ratio, 30-50% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t17
title: "Pion ratio 5" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $p_{\mathrm{T}}$-differential $\pi^{-}/\pi^{+}$ antiparticle-to-particle yield ratio, 50-90% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t18
title: "Proton ratio 1" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $p_{\mathrm{T}}$-differential $\overline{\mathrm{p}}/\mathrm{p}$ antiparticle-to-particle yield ratio, 0-5% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t19
title: "Proton ratio 2" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $p_{\mathrm{T}}$-differential $\overline{\mathrm{p}}/\mathrm{p}$ antiparticle-to-particle yield ratio, 5-10% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t20
title: "Proton ratio 3" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $p_{\mathrm{T}}$-differential $\overline{\mathrm{p}}/\mathrm{p}$ antiparticle-to-particle yield ratio, 10-30% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t21
title: "Proton ratio 4" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $p_{\mathrm{T}}$-differential $\overline{\mathrm{p}}/\mathrm{p}$ antiparticle-to-particle yield ratio, 30-50% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t22
title: "Proton ratio 5" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $p_{\mathrm{T}}$-differential $\overline{\mathrm{p}}/\mathrm{p}$ antiparticle-to-particle yield ratio, 50-90% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t23
title: "Omega ratio 1" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $c\mathrm{t}$-differential $\overline{ \Omega}^{+} / \Omega^-$ antiparticle-to-particle yield ratio, 0-5% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t24
title: "Omega ratio 2" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $c\mathrm{t}$-differential $\overline{ \Omega}^{+} / \Omega^-$ antiparticle-to-particle yield ratio, 5-10% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t25
title: "Omega ratio 3" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $c\mathrm{t}$-differential $\overline{ \Omega}^{+} / \Omega^-$ antiparticle-to-particle yield ratio, 10-30% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t26
title: "Omega ratio 4" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $c\mathrm{t}$-differential $\overline{ \Omega}^{+} / \Omega^-$ antiparticle-to-particle yield ratio, 30-50% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t27
title: "Omega ratio 5" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $c\mathrm{t}$-differential $\overline{ \Omega}^{+} / \Omega^-$ antiparticle-to-particle yield ratio, 50-90% centrality
description: No data abstract available.
DOI: 10.17182/hepdata.151650.v1/t28
title: "Hypertriton ratio 1" of "Measurements of chemical potentials in Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 5.02$ TeV"

description: $c\mathrm{t}$-differential ${}_{\overline{\Lambda}}^{3}\overline{\mathrm{H}} / ^{3}_{\Lambda}\mathrm{H}$ antiparticle-to-particle yield ratio, 0-5% centrality
description: No data abstract available.