cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11537892
title: Mucosal-associated invariant T-Cell (MAIT) activation is altered by chlorpyrifos- and glyphosate-treated commensal gut bacteria

description: Mucosal-associated invariant T-cells (MAIT) can react to metabolites of the vitamins riboflavin and folate which are produced by the human gut microbiota. Since several studies showed that the pesticide chlorpyrifos (CPF) and glyphosate (GLP) can impair the gut microbiota, the present study was undertaken to investigate the impact of CPF and GLP treatment on the metabolism of gut microbiota and the resulting bacteria-mediated modulation of MAIT cell activity. Here, <i>Bifidobacterium adolescentis</i> (<i>B. adolescentis</i>), <i>Lactobacillus reuteri</i> (<i>L. reuteri</i>), and <i>Escherichia coli</i> (<i>E. coli</i>) were treated with CPF (50–200 µM) or GLP (75–300 mg/L) and then used in MAIT cell stimulation assays as well as in vitamin and proteome analyses. All three bacteria were nonpathogenic and chosen as representatives of a healthy human gut microflora. The results showed that <i>E. coli</i> activated MAIT cells whereas <i>B. adolescentis</i> and <i>L. reuteri</i> inhibited MAIT cell activation. CPF treatment significantly increased <i>E. coli</i>-mediated MAIT cell activation. Treatment of <i>B. adolescentis</i> and <i>L. reuteri</i> with CPF and GLP weakened the inhibition of MAIT cell activation. Riboflavin and folate production by the test bacteria was influenced by CPF treatment, whereas GLP had only minor effects. Proteomic analysis of CPF-treated <i>E. coli</i> revealed changes in the riboflavin and folate biosynthesis pathways. The findings here suggest that the metabolism of the analyzed bacteria could be altered by exposure to CPF and GLP, leading to an increased pro-inflammatory immune response.
DOI: 10.6084/m9.figshare.13114436
title: Cadmium induces CCL2 production in glioblastoma cells via activation of MAPK, PI3K, and PKC pathways

description: Cadmium (Cd) is accumulated in human astrocytes and induces the production of interleukin (IL)-6 and IL-8. Astrocytes are one of the major sources of chemokine C–C motif ligand 2 (CCL2; known as monocyte chemoattractant protein-1 [MCP-1]), in the brain. Elevated CCL2 levels are associated with cognitive impairment as well as the migration and invasion of glioblastoma cells. The present study hypothesized that non-toxic concentrations of Cd (as cadmium chloride [CdCl<sub>2</sub>]) could up-regulate CCL2 production in U-87 MG human glio-blastoma cells. The results showed that after exposure of the U-87 MG cells to CdCl<sub>2</sub> at 1 and 10 µM, there was an up-regulation of <i>CCL2</i> mRNA expression after 3 h of exposure and increased CCL2 secretion after 6 and 24 h. The study also found that inhibition of MAPK pathways, including ERK1/2, p38, and JNK by U0126, SB203580 and SP600125, respectively, reduced Cd-induced CCL2 secretion by the cells. Moreover, when cells were pretreated with Ro 32-0432 (an inhibitor of calcium-dependent PKC) and LY294002 (a PI3K inhibitor), this also resulted in a down-regulation of any Cd-induced CCL2 expression. Taken together, the results of this study allow for the conclusion to be made that CCL2 up-regulation in U-87 MG cells induced by Cd is mediated, in part, by an activation of MAPK, PI3K/Akt, and PKC pathways.
DOI: 10.6084/m9.figshare.11537892.v1
title: Mucosal-associated invariant T-Cell (MAIT) activation is altered by chlorpyrifos- and glyphosate-treated commensal gut bacteria

description: Mucosal-associated invariant T-cells (MAIT) can react to metabolites of the vitamins riboflavin and folate which are produced by the human gut microbiota. Since several studies showed that the pesticide chlorpyrifos (CPF) and glyphosate (GLP) can impair the gut microbiota, the present study was undertaken to investigate the impact of CPF and GLP treatment on the metabolism of gut microbiota and the resulting bacteria-mediated modulation of MAIT cell activity. Here, <i>Bifidobacterium adolescentis</i> (<i>B. adolescentis</i>), <i>Lactobacillus reuteri</i> (<i>L. reuteri</i>), and <i>Escherichia coli</i> (<i>E. coli</i>) were treated with CPF (50–200 µM) or GLP (75–300 mg/L) and then used in MAIT cell stimulation assays as well as in vitamin and proteome analyses. All three bacteria were nonpathogenic and chosen as representatives of a healthy human gut microflora. The results showed that <i>E. coli</i> activated MAIT cells whereas <i>B. adolescentis</i> and <i>L. reuteri</i> inhibited MAIT cell activation. CPF treatment significantly increased <i>E. coli</i>-mediated MAIT cell activation. Treatment of <i>B. adolescentis</i> and <i>L. reuteri</i> with CPF and GLP weakened the inhibition of MAIT cell activation. Riboflavin and folate production by the test bacteria was influenced by CPF treatment, whereas GLP had only minor effects. Proteomic analysis of CPF-treated <i>E. coli</i> revealed changes in the riboflavin and folate biosynthesis pathways. The findings here suggest that the metabolism of the analyzed bacteria could be altered by exposure to CPF and GLP, leading to an increased pro-inflammatory immune response.
DOI: 10.25919/xmq6-sw26
title: Parkes observations for project P595 semester 2021APRS_02

description: We propose to continue the PULSE@Parkes project in which high school students from Australia and around the World use the Parkes radio telescope in a remote observing model to observe and analyse pulsar data. The data from some PULSE@Parkes observations are used to support the space missions, other observations supplement the P456 Pulsar Timing Array project and the remainder were chosen in order to make a detailed analysis of pulsar timing irregularities and intermittency.
DOI: 10.5281/zenodo.4739558
title: nsls2_amx_raster_main_protease

description: X-ray diffraction test data for development and benchmarking of inline spotfinder/indexer. Horizontal snake raster scan (19x17) on main protease displaying multiple lattices. Omega reset to start value at end of each row with omega oscillation per image. Omega numbering in h5 files does not reflect true value after top (first) row because of this required reset (detector trigger). Xtal ultimately yielded approximate 1.8 Angstrom data set with reported lattice. Temperature (K): 100 flux (atten. corr.; ph/s): 4E11 Optics: KB Sample mount: 100 um Mitegen micromount Sample matrix: 100 mM HEPES pH 7, 22% w/v PEG4k, 3%v/v DMSO; direct vitrification Lattice (a,b,c,alpha,beta,gamma): 109.3, 54.7, 47.8, 90, 100.9, 90
DOI: 10.5281/zenodo.4739557
title: nsls2_amx_raster_main_protease

description: X-ray diffraction test data for development and benchmarking of inline spotfinder/indexer. Horizontal snake raster scan (19x17) on main protease displaying multiple lattices. Omega reset to start value at end of each row with omega oscillation per image. Omega numbering in h5 files does not reflect true value after top (first) row because of this required reset (detector trigger). Xtal ultimately yielded approximate 1.8 Angstrom data set with reported lattice. Temperature (K): 100 flux (atten. corr.; ph/s): 4E11 Optics: KB Sample mount: 100 um Mitegen micromount Sample matrix: 100 mM HEPES pH 7, 22% w/v PEG4k, 3%v/v DMSO; direct vitrification Lattice (a,b,c,alpha,beta,gamma): 109.3, 54.7, 47.8, 90, 100.9, 90
DOI: 10.15468/4dn799
title: Four new species of Lycocerus Gorham, 1889 from China (Coleoptera: Cantharidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Yang, Yu-Xia, Yang, Xing-Ke (2013): Four new species of Lycocerus Gorham, 1889 from China (Coleoptera: Cantharidae). Journal of Natural History 47 (1 - 2): 75-86, DOI: 10.1080/00222933.2012.742169, URL: http://dx.doi.org/10.1080/00222933.2012.742169
DOI: 10.15468/s7myke
title: Six new epigean species of Caecidotea (Isopoda: Asellidae) distributed along the Trans-Mexican Volcanic Belt in Central Mexico

description: This dataset contains the digitized treatments in Plazi based on the original journal article García-Vázquez, Leonardo, Pedraza-Lara, Carlos, Rodríguez-Almaraz, Gabino (2021): Six new epigean species of Caecidotea (Isopoda: Asellidae) distributed along the Trans-Mexican Volcanic Belt in Central Mexico. Zootaxa 4965 (1): 45-77, DOI: https://doi.org/10.11646/zootaxa.4965.1.2
DOI: 10.6084/m9.figshare.14556195.v1
title: Data Oleic acid based experimental evolution of Bacillus megaterium yielding an enhanced P450 BM3 variant.xlsx

description: Data from all the figures for the ''<i>Oleic acid based experimental evolution of Bacillus megaterium yielding an enhanced P450 BM3 variant</i>'' article.<br>
DOI: 10.6084/m9.figshare.14556195
title: Data Oleic acid based experimental evolution of Bacillus megaterium yielding an enhanced P450 BM3 variant.xlsx

description: Data from all the figures for the ''<i>Oleic acid based experimental evolution of Bacillus megaterium yielding an enhanced P450 BM3 variant</i>'' article.<br>
DOI: 10.15468/7k8s6d
title: Molecular phylogeny of the Austrolebias adloffi group (Cyprinodontiformes Rivulidae), with description of two new endangered and highly endemic species of annual killifishes from the Laguna dos Patos system, southern Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Volcan, Matheus Vieira, Barbosa, Crislaine, Robe, Lizandra Jaqueline, Lanés, Luis Esteban Krause (2021): Molecular phylogeny of the Austrolebias adloffi group (Cyprinodontiformes Rivulidae), with description of two new endangered and highly endemic species of annual killifishes from the Laguna dos Patos system, southern Brazil. Zootaxa 4965 (1): 87-113, DOI: https://doi.org/10.11646/zootaxa.4965.1.4
DOI: 10.5066/p9gp8cof
title: Meteorological Database, Argonne National Laboratory, Illinois, January 1, 1948 - September 30, 2020

description: This data release is the update of the U.S. Geological Survey - ScienceBase data release by Bera (2020), with the processed data through September 30, 2020. The primary data for water year 2020 (a water year is the 12-month period, October 1 through September 30, in which it ends) is downloaded from the Argonne National Laboratory (ANL) (Argonne National Laboratory, 2020) and is processed following the guidelines documented in Over and others (2010). Daily potential evapotranspiration (PET) in thousandths of an inch is computed from average daily air temperature in degrees Fahrenheit (�F), average daily dewpoint temperature in degrees Fahrenheit (�F), daily total wind movement in miles (mi), and daily total solar radiation in Langleys per day (Lg/d) and disaggregated to hourly PET in thousandths of an inch using the Fortran program LXPET (Murphy, 2005). Missing and apparently erroneous data values were replaced with adjusted values from nearby stations used as "backup". Temporal variations in the statistical properties of the data resulting from changes in measurement and data storage methodologies were adjusted to match the statistical properties resulting from the data collection procedures that have been in place since January 1, 1989 (Over and others, 2010). The adjustments were computed based on the regressions between the primary data series from ANL and the backup series using data obtained during common periods? the statistical properties of the regressions were used to assign estimated standard errors to values that were adjusted or filled from other series. The Illinois Climate Network (Water and Atmospheric Resources Monitoring Program, 2020) station at St. Charles, Illinois is used as "backup" for the air temperature, solar radiation and wind speed data. The Midwestern Regional Climate Center (Midwestern Regional Climate Center, 2020) provided the hourly dewpoint temperature and wind speed data collected by the National Weather Service from the station at O'Hare International Airport and used as "backup". Each data source flag is of the form "xyz" that allows the user to determine its source and the methods used to process the data (Over and others, 2010).
DOI: 10.34740/kaggle/dsv/2205862
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.5517/ccdc.csd.cc26xp94
title: CCDC 2053356: Experimental Crystal Structure Determination

description: Related Article: Mohcine Missioui, Salma Mortada, Walid Guerrab, Goncagül Serdaroğlu, Savaş Kaya, Joel T. Mague, El Mokhtar Essassi, My El Abbes Faouzi, Youssef Ramli|2021|J.Mol.Struct.|1239|130484|doi:10.1016/j.molstruc.2021.130484
DOI: 10.5517/ccdc.csd.cc26yxlp
title: CCDC 2054543: Experimental Crystal Structure Determination

description: Related Article: Azadeh Mirzaahmadi, Seyed Abolfazl Hosseini-Yazdi, Majid Mahdavi, Michal Dusek, Valcav. Eigner, Morgane Poupon|2021|Polyhedron|202|115205|doi:10.1016/j.poly.2021.115205
DOI: 10.5517/ccdc.csd.cc26yxmq
title: CCDC 2054544: Experimental Crystal Structure Determination

description: Related Article: Azadeh Mirzaahmadi, Seyed Abolfazl Hosseini-Yazdi, Majid Mahdavi, Michal Dusek, Valcav. Eigner, Morgane Poupon|2021|Polyhedron|202|115205|doi:10.1016/j.poly.2021.115205
DOI: 10.5517/ccdc.csd.cc271z5g
title: CCDC 2057475: Experimental Crystal Structure Determination

description: Related Article: SUPRIYA SUNDARESWARAN|2021|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc272w07
title: CCDC 2058338: Experimental Crystal Structure Determination

description: Related Article: Yongzhe Zheng, Chang-Qiang Ke, Shuaizhen Zhou, Lu Feng, Chunping Tang, Yang Ye|2021|Fitoterapia|151|104900|doi:10.1016/j.fitote.2021.104900
DOI: 10.15468/pr7723
title: Two new species of the genus Paracyatholaimus Micoletzky (Nematoda: Cyatholaimidae) from the Yellow Sea

description: This dataset contains the digitized treatments in Plazi based on the original journal article Huang, Yong, Xu, Kuidong (2013): Two new species of the genus Paracyatholaimus Micoletzky (Nematoda: Cyatholaimidae) from the Yellow Sea. Journal of Natural History 47 (21 - 22): 1381-1392, DOI: 10.1080/00222933.2012.752544, URL: http://dx.doi.org/10.1080/00222933.2012.752544
DOI: 10.25318/3610064501-eng
title: Environmental and Clean Technology Products Economic Account, output, gross domestic product, and compensation of employees per industry

description: Annual output, gross domestic product, and compensation of employees estimates of the environmental and clean technology products sector, by industry, for Canada, provinces and territories.
DOI: 10.6084/m9.figshare.14556273
title: tartar Bacopa monnieri, data set .xlsx

description: Data set on cognition and physical performance in a study on Bacopa monnieri,
DOI: 10.6084/m9.figshare.14556273.v1
title: tartar Bacopa monnieri, data set .xlsx

description: Data set on cognition and physical performance in a study on Bacopa monnieri,
DOI: 10.25318/3610064501-fra
title: Compte des produits environnementaux et de technologies propres, production, produit intérieur brut et rémunération des salariés par industrie

description: Estimations annuelles de la production, du produit intérieur brut et de la rémunération des salariés du secteur des produits environnementaux et de technologies propres, par industrie, pour le Canada, les provinces et les territoires.
DOI: 10.25318/3610064601-eng
title: Environmental and Clean Technology Products Economic Account, international imports and exports per trading partner

description: Annual international imports and externational exports estimates of the environmental and clean technology products sector, per trading partner, for Canada, provinces and territories.
DOI: 10.15468/xv29ah
title: First record of Monobrachium parasitum Mereschkowsky, 1877 (Cnidaria: Hydrozoa) from Brazil, in the tropical southwestern Atlantic, and its implication for bipolarity concepts

description: This dataset contains the digitized treatments in Plazi based on the original journal article Grohmann, Priscila A., Absalão, Ricardo S., da Silva, Vera Maria Abud P. (2013): First record of Monobrachium parasitum Mereschkowsky, 1877 (Cnidaria: Hydrozoa) from Brazil, in the tropical southwestern Atlantic, and its implication for bipolarity concepts. Journal of Natural History 47 (25 - 28): 1865-1874, DOI: 10.1080/00222933.2012.724718, URL: http://dx.doi.org/10.1080/00222933.2012.724718
DOI: 10.5519/qd.jkjziwzq
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1001 records)
DOI: 10.25318/3610064601-fra
title: Compte des produits environnementaux et de technologies propres, exportations et importations internationales par partenaire commercial

description: Estimations annuelles des importations internationales et exportations externationales des biens et services du secteur des produits environnementaux et de technologies propres, par partenaire commercial, pour le Canada, les provinces et les territoires.
DOI: 10.25318/4110004801-eng
title: Representation of men and women in First Nation band councils and Chiefs in First Nation communities by sex

description: Number and proportion of First Nations council members and Chiefs in First Nation communities, by sex, Canada.
DOI: 10.5281/zenodo.4742617
title: Dr.

description: Table A1. Summary of conditions pertaining all the assays performed in the current work; Light Source: WCL = White Cool Light, GLDL = GroLux and Daylight Combo. All assays lasted four weeks. Table A2. Culture media and fertilizer nutrient (as chemical formulae) and vitamin list applied in the small-scaled Culture Media assays. Von Stosch Enriched was also used as the standard culture media for all the assays described in the present study. Flora Nova refers to all the nutrients present in both Flora Nova Bloom and Flora Nova Grow, as they differ only regarding the concentrations of nutrients.
DOI: 10.5281/zenodo.4742616
title: Dr.

description: Table A1. Summary of conditions pertaining all the assays performed in the current work; Light Source: WCL = White Cool Light, GLDL = GroLux and Daylight Combo. All assays lasted four weeks. Table A2. Culture media and fertilizer nutrient (as chemical formulae) and vitamin list applied in the small-scaled Culture Media assays. Von Stosch Enriched was also used as the standard culture media for all the assays described in the present study. Flora Nova refers to all the nutrients present in both Flora Nova Bloom and Flora Nova Grow, as they differ only regarding the concentrations of nutrients.
DOI: 10.25318/4110004801-fra
title: Représentation des hommes et des femmes dans les conseil de bandes des Premières Nations et les Chefs dans les communautés des Premières Nations selon le sexe

description: Nombre et proportion des membres de conseil des Premières Nations et de Chefs dans les communautés des Premières Nations, selon le sexe, Canada.
DOI: 10.25318/2310029001-eng
title:  Trucking financial statistics, by province and territory

description: Financial statistics such as expenses and revenues, for the Canadian trucking industry, for each province and territory.
DOI: 10.25318/2310029001-fra
title: Statistiques financières sur le camionnage, selon les provinces et territoires

description: Statistiques financières telles que les dépenses et les revenus, pour l'industrie canadienne du camionnage, pour chaque province et territoire.
DOI: 10.25318/2310029101-eng
title: Trucking financial statistics, by industry group

description: Financial statistics such as expenses and revenues, for the Canadian trucking industry, by industry group from the North American Industry Classification System (NAICS).
DOI: 10.25318/2310029101-fra
title: Statistiques financières sur le camionnage, selon le groupe d'industries

description: Statistiques financières telles que les dépenses et les revenus, pour l'industrie canadienne du camionnage, par groupe d'industrie basé sur le Système de classification des industries de l'Amérique du nord (SCIAN).
DOI: 10.6084/m9.figshare.14454219
title: e-Supplementary Table 3

description: <b>Supplementary Table 3</b>: Change from 0h to 14h in pulmonary vascular resistance index (PVRI), alveolar arterial oxygen gradient (AaO2) and interleukin 6 (IL-6) levels in animals receiving cell free hemoglobin alone, bacteria alone and both CFH and bacteria together. PVRI and AaO2 were found to be additive, whereas IL-6 was found to be significantly less than additive.
DOI: 10.6084/m9.figshare.14454219.v1
title: e-Supplementary Table 3

description: <b>Supplementary Table 3</b>: Change from 0h to 14h in pulmonary vascular resistance index (PVRI), alveolar arterial oxygen gradient (AaO2) and interleukin 6 (IL-6) levels in animals receiving cell free hemoglobin alone, bacteria alone and both CFH and bacteria together. PVRI and AaO2 were found to be additive, whereas IL-6 was found to be significantly less than additive.
DOI: 10.5281/zenodo.4742814
title: shirleyahn/bd_oxidase_ff: First release

description: Amber force field parameters for E. coli cytochrome bd oxidase (PDB: 6RKO)
DOI: 10.21227/jv22-ss36
title: IQ dataset of LTE and Wi-Fi signals

description: The demand for technologies relying on the radio spectrum, such as mobile communications and IoT, has been growing exponentially. As a consequence, providing access to the radio spectrum is becoming increasingly more important. The ever-growing wireless traffic and the increasing scarcity of available spectrum warrants efficient management of the radio spectrum. At the same time, machine learning (ML) is becoming ubiquitous and has found applications in many fields for its ability to identify patterns and assist with decision-making processes. Recently, machine learning algorithms have been used to address challenges in the wireless communications domain, such as radio spectrum sensing, and have shown better performance than traditional sensing methods, such as energy detection. Spectrum sensing, a method for detecting and identifying different wireless signals being transmitted in the same band of the radio spectrum, is crucial for improving dynamic spectrum sharing, which has the potential to enhance sharing and coexistence of different wireless technologies in the same frequency band and ultimately improve spectrum efficiency. To this end, this research evaluates different types of autoencoders, such as deep, variational and Long Short-Term Memory (LSTM) autoencoders, to identify and differentiate between LTE and Wi-Fi transmissions. The goal is to investigate the performance of the different types of autoencoders on an I/Q dataset consisting of LTE and a combination of Wi-Fi signals (IEEE 802.11ax and IEEE 802.11ac) for the classification task in terms of complexity, precision, and recall to identify the best algorithm. Our models have achieved up to 99.9\% precision and 88.1\% recall for this classification task. Additionally, with a shortest training time of approximately 47 seconds, the models are suitable for online learning and deployment in a dynamic RF environment.
DOI: 10.15468/8dk6r3
title: Iranian Cunaxidae (Acari: Prostigmata: Bdelloidea). Part III. Subfamily Cunaxoidinae

description: This dataset contains the digitized treatments in Plazi based on the original journal article Heyer, Jacob den, Ueckermann, Edward A., Khanjani, Mohammad (2013): Iranian Cunaxidae (Acari: Prostigmata: Bdelloidea). Part III. Subfamily Cunaxoidinae. Journal of Natural History (J. Nat. Hist.) 47 (31 - 32): 2049-2070, DOI: 10.1080/00222933.2012.763060, URL: http://dx.doi.org/10.1080/00222933.2012.763060
DOI: 10.6084/m9.figshare.14336625
title: Learning Multiple Quantiles With Neural Networks

description: We present a neural network model for estimation of multiple conditional quantiles that satisfies the noncrossing property. Motivated by linear noncrossing quantile regression, we propose a noncrossing quantile neural network model with inequality constraints. In particular, to use the first-order optimization method, we develop a new algorithm for fitting the proposed model. This algorithm gives a nearly optimal solution without the projected gradient step that requires polynomial computation time. We compare the performance of our proposed model with that of existing neural network models on simulated and real precipitation data. Supplementary materials for this article are available online.