cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.spk5z7
title: Occurrence Download

description: A dataset containing 4567 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "StateProvince is ARkansas",
 "TaxonKey is Bubulcus ibis (Linnaeus, 1758)"
 ]
}

 The dataset includes 4567 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011789-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-11841
title: Put' = Voie = [The way], no. 27 (April 1931)

description: [description english/roman)] Путь, № 27 (Апрель 1931), cтp.
DOI: 10.15468/dl.zt7dj9
title: Occurrence Download

description: A dataset containing 1484 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ceratitis capitata (Wiedemann, 1824)",
 "Year 2000-2023"
 ]
}

 The dataset includes 1484 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065635-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dxbf4e
title: Occurrence Download

description: A dataset containing 65535 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is OAC-BIO Herbarium"
 ]
}

 The dataset includes 65535 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0346540-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-11829
title: Put' = Voie = [The way], no. 27 (April 1931)

description: [description english/roman)] Путь, № 27 (Апрель 1931), cтp.
DOI: 10.15468/dl.nthn9v
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rytidosperma pulchrum (Zotov) Connor & Edgar"
 ]
}

 The dataset includes 16 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0108283-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-11902
title: Put' = Voie = [The way], no. 27 (April 1931)

description: [description english/roman)] Путь, № 27 (Апрель 1931), cтp.
DOI: 10.15468/dl.vt2zr3
title: Occurrence Download

description: A dataset containing 593 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Conocephalum japonicum (Thunb.) Grolle"
 ]
}

 The dataset includes 593 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0318966-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jqcrm4
title: Occurrence Download

description: A dataset containing 150 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyclanthera longisepala (Cogn.) H.Schaef. & S.S.Renner"
 ]
}

 The dataset includes 150 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0108315-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-12937
title: Put' = Voie = [The way], no. 38 (May 1933)

description: [description english/roman)] Irregular frequency
DOI: 10.15468/dl.py45tj
title: Occurrence Download

description: A dataset containing 546224 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lepus europaeus Pallas, 1778"
 ]
}

 The dataset includes 546224 records from 1034 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0346586-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.644ebr
title: Occurrence Download

description: A dataset containing 6388257 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is North America",
 "OccurrenceStatus is Present",
 "TaxonKey is Insecta",
 "Year 2010-2025"
 ]
}

 The dataset includes 6388257 records from 482 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031325-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8h3h9e
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Nothobranchius itigiensis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031379-250827131500795/datasets/export for details.
DOI: 10.15468/dl.7kry6n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tropodiaptomus stuhlmanni, Typhlocaris lethaea, Typhlopatsa pauliani)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((47.5465 -25.2196,47.6434 -24.9401,46.1382 -24.9401,46.1382 -25.8059,46.3822 -25.6931,46.8647 -25.6616,47.5465 -25.2196))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031380-250827131500795/datasets/export for details.
DOI: 10.17026/dans-xzf-y4zc
title: Domburg Land van Vliedduin Domburg Land van Vliedduin. Gemeente Veere. Inventariserend Veldonderzoek door middel van Proefsleuven

description: &lt;p&gt;Het voornemen is om plangebied “Land van Vliedduin” te ontwikkelen. Daarbij worden onder meer een park met waterpartijen, bouwkavels en een uitbreiding van de begraafplaats gerealiseerd. In het kader het hiertoe benodigde bestemmingsplan werd eerder door Artefact een Archeologisch Bureauonderzoek en een Inventariserend Veldonderzoek door middel van verkennende boringen uitgevoerd. Op basis van de resultaten van dit vooronderzoek werd door de gemeente Veere bepaald dat vervolgonderzoek in de vorm van een Inventariserend Veldonderzoek door middel van Proefsleuven binnen een deel van het plangebied diende te worden uitgevoerd.&lt;/p&gt;&lt;p&gt;Artefact heeft in november 2014 een Inventariserend Veldonderzoek door middel van Proefsleuven (fase 1) uitgevoerd binnen plangebied Land van Vliedduin te Domburg, gelegen in de gemeente Veere. Naar aanleiding van de bijzondere resultaten van dit onderzoek en het, om die reden, hertekende inrichtingsplan werd in oktober 2015 een Aanvullend Inventariserend Veldonderzoek door middel van Proefsleuven (fase 2) uitgevoerd.&lt;/p&gt;&lt;p&gt;Tijdens het proefsleuvenonderzoek zijn op twee niveaus sporen aangetroffen. Het oudste spoor is aangetroffen in de top van het Hollandveen. Het betreft een greppel die enkel op basis van stratigrafie gedateerd kan worden tussen de IJzertijd en Romeinse tijd. &lt;/p&gt;&lt;p&gt;Het tweede niveau waarop sporen werden aangetroffen is de top van het Laagpakket van Walcheren. Tijdens de eerste fase van het proefsleuvenonderzoek is een circulair omgracht terrein met centraal een bakstenen fundering vastgesteld. Deze kunnen worden toegeschreven aan een 13e-eeuwse motte. Net ten noorden van deze gracht zijn enkele kuilen en mogelijk een baksteenoven vastgesteld. Ten noorden van deze motte zijn tijdens een tweede fase van het proefsleuvenonderzoek nog meer sporen vastgesteld die dateren uit de Late Middeleeuwen. Daarbij werd tevens een tweede bakstenen fundering aangetroffen waarbij hetzelfde bouwmateriaal is gebruikt als de fundering van de motte. Echter op basis van het huidige onderzoek kan niet met zekerheid worden gesteld dat beide uit dezelfde fase dateren. Verder zijn in de cultuurlaag en moesbedden grote hoeveelheden verbrande klei en 11e tot vroeg 14e-eeuws aardewerk aangetroffen. Dit wijst op de aanwezigheid van houtbouw die mogelijk wel tot dezelfde, of oudere, fase als de 13e-eeuwse motte kan worden toegeschreven. Verder zijn enkele greppels vastgesteld die dateren tussen de Late Middeleeuwen en Nieuwe Tijd.&lt;/p&gt;
DOI: 10.5281/zenodo.15595117
title: Supplementary data: Orbitally paced hydroclimate changes in western Amazonia wetlands during the Middle Miocene Climate Transition

description: Supplementary data for the manuscript of Duarte et al. (2025) submitted to Geophysical Research Letters. This table contains X-ray fluorescence (XRF) data and astronomical ages for the interval 49.5 to 147.43 m in the drill core 1-AS-105-AM. This interval comprises mainly siliciclastic sedimentary rocks of the Solimões Formation, deposited in the Middle Miocene, in the Solimões basin, western Amazonia, Brazil (4.25°S, 69.93°W). The Brazilian Geological Survey provided core samples.
DOI: 10.5281/zenodo.16762506
title: Supplementary data: Orbitally paced hydroclimate changes in western Amazonia wetlands during the Middle Miocene Climate Transition

description: Supplementary data for the manuscript of Duarte et al. (2025) submitted to Geophysical Research Letters. This table contains X-ray fluorescence (XRF) data and astronomical ages for the interval 49.5 to 147.43 m in the drill core 1-AS-105-AM. This interval comprises mainly siliciclastic sedimentary rocks of the Solimões Formation, deposited in the Middle Miocene, in the Solimões basin, western Amazonia, Brazil (4.25°S, 69.93°W). The Brazilian Geological Survey provided core samples.
DOI: 10.15468/dl.vs5cug
title: Occurrence Download

description: A dataset containing 865 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hexaplex trunculus",
 "Country is Spain",
 "HasCoordinate is true"
 ]
}

 The dataset includes 865 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031381-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30062416
title: Historical and contemporary drivers of Amazonian stream fish community assembly

description: This dataset provides the results of an analysis examining the functional structure and diversity of Amazonian stream fish assemblages. Using null models, the study investigates the spatial variation in functional composition and trait dispersion, focusing on the influence of ecological and historical drivers, such as stream depth, substrate composition, and historical climatic stability. The findings highlight the critical role of habitat complexity, niche differentiation, and evolutionary processes in shaping fish community assembly patterns. This research contributes to understanding how historical events and ecological factors interact to influence the functional diversity of Amazonian ecosystems, with implications for biodiversity conservation and ecosystem management.
DOI: 10.6084/m9.figshare.30062416.v1
title: Historical and contemporary drivers of Amazonian stream fish community assembly

description: This dataset provides the results of an analysis examining the functional structure and diversity of Amazonian stream fish assemblages. Using null models, the study investigates the spatial variation in functional composition and trait dispersion, focusing on the influence of ecological and historical drivers, such as stream depth, substrate composition, and historical climatic stability. The findings highlight the critical role of habitat complexity, niche differentiation, and evolutionary processes in shaping fish community assembly patterns. This research contributes to understanding how historical events and ecological factors interact to influence the functional diversity of Amazonian ecosystems, with implications for biodiversity conservation and ecosystem management.
DOI: 10.15468/dl.4qttvv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Desmodium heterophyllum",
 "Country is Tuvalu",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031383-250827131500795/datasets/export for details.
DOI: 10.5281/zenodo.11080748
title: Supplementary Information for the manuscript: "Gene expression evolution is predicted by stronger selection at more pleiotropic genes"

description: This repository contains the supplementary information for the manuscript "Gene expression evolution is predicted by stronger selection at more pleiotropic genes" (https://doi.org/10.1101/2024.07.22.604294).

The supplementary data "data.tar.gz" is related to the Github repository https://github.com/charlesrocabert/Koch-et-al-Predictability-of-Gene-Expression.

Content of the repository



Script S1. BSFG estimates (50.9 MB).

Script S2. WGCNA analysis and results G1 (99.6 MB).

Data S1. Datasets resulting from the global genomics analysis of the output of the transcriptomics pipeline (5.9 MB).

Data S2. VCF file containing the 566,296 quality-checked SNPs (1.1 GB).

Data S3. VCF file containing the 358,142 SNPs with a call rate higher or equal to 50% (964.3 MB).

Data S4. VCF file containing the imputed genotypes (964.3 MB).

Data S5. Results of the imputation tests (479.5 kB).

Data S6. VCF file containing imputed genotypes where SNPs with a minor allele frequency lower than 0.05 have been filtered out (MAF $\leq$ 0.05) (176.0 MB).

Data S7. List of the 1,273 significant eQTL associations (for gene expression levels or relative fitness as phenotypes) (61.2 kB).

Data S8. List of allele frequency changes (AFCs) for every markers in HD environment, for lines L1, L2, L3, L5, L6, Mx1 and Mx2 (32.4 MB).

Data S9. List of all SNPs indicating if their AFC is significantly higher in each line and their degree of parallelism (2.4 MB).

Data S10. Excel file containing the results of the gene functional enrichment analysis of the hub and eQTL carrier genes (33.7 KB).

data.tar.gz. Dataset mandatory to re-run the genomics analysis (see https://github.com/charlesrocabert/Koch-et-al-Predictability-of-Gene-Expression) (7.8 GB).
DOI: 10.5281/zenodo.17063960
title: Supplementary Information for the manuscript: "Gene expression evolution is predicted by stronger selection at more pleiotropic genes"

description: This repository contains the supplementary information for the manuscript "Gene expression evolution is predicted by stronger selection at more pleiotropic genes" (https://doi.org/10.1101/2024.07.22.604294).

The supplementary data "data.tar.gz" is related to the Github repository https://github.com/charlesrocabert/Koch-et-al-Predictability-of-Gene-Expression.

Content of the repository



Script S1. BSFG estimates (50.9 MB).

Script S2. WGCNA analysis and results G1 (99.6 MB).

Data S1. Datasets resulting from the global genomics analysis of the output of the transcriptomics pipeline (5.9 MB).

Data S2. VCF file containing the 566,296 quality-checked SNPs (1.1 GB).

Data S3. VCF file containing the 358,142 SNPs with a call rate higher or equal to 50% (964.3 MB).

Data S4. VCF file containing the imputed genotypes (964.3 MB).

Data S5. Results of the imputation tests (479.5 kB).

Data S6. VCF file containing imputed genotypes where SNPs with a minor allele frequency lower than 0.05 have been filtered out (MAF $\leq$ 0.05) (176.0 MB).

Data S7. List of the 1,273 significant eQTL associations (for gene expression levels or relative fitness as phenotypes) (61.2 kB).

Data S8. List of allele frequency changes (AFCs) for every markers in HD environment, for lines L1, L2, L3, L5, L6, Mx1 and Mx2 (32.4 MB).

Data S9. List of all SNPs indicating if their AFC is significantly higher in each line and their degree of parallelism (2.4 MB).

Data S10. Excel file containing the results of the gene functional enrichment analysis of the hub and eQTL carrier genes (33.7 KB).

data.tar.gz. Dataset mandatory to re-run the genomics analysis (see https://github.com/charlesrocabert/Koch-et-al-Predictability-of-Gene-Expression) (7.8 GB).
DOI: 10.15468/dl.rpehzt
title: Occurrence Download

description: A dataset containing 822 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is India",
 "Geometry POLYGON((32 -43,127 -43,127 28,32 28,32 -43))",
 "MediaType is Image",
 "TaxonKey is Marchantiophyta"
 ]
}

 The dataset includes 822 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031384-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/dans-zjq-2zd3
title: Domburg Domburgseweg 1A Domburg Domburgseweg 1A. Gemeente Veere. Archeologisch Bureauonderzoek en Inventariserend Veldonderzoek door middel van boringen

description: &lt;p&gt;Het voornemen is om het bestaande hotel aan de Domburgseweg 1A te Domburg uit te breiden met een ondergrondse parkeerkelder. Het plangebied is gesitueerd in het noordoostelijke kwadrant van een vroegmiddeleeuwse ringwalburg. Het grootste deel van het plangebied heeft om deze reden een status als beschremd rijksmonument, het overige deel is tevens planologisch beschermd in het gemeentelijke bestemmingsplan. In het kader van de benodigde omgevingsvergunning en monumentenvergunning heeft Artefact! Advies en Onderzoek in Erfgoed een Archeologisch Bureauonderzoek en een Inventariserend Veldonderzoek door middel van boringen uitgevoerd. &lt;/p&gt;&lt;p&gt;In het kader van het bureauonderzoek werd een groot aantal bronnen bestudeerd die geleid hebben tot een gespecificeerd verwachtingsmodel voor het plangebied. Dit model werd vervolgens getoetst door het uitvoeren van een mechanisch booronderzoek tot maximaal 10,40 m-mv. Op basis van de resultaten dit onderzoek kan gesteld worden dat: - De geologische basis bestaat uit een diepreikende mariene getijdenkreek behorende tot het Laagpakket van Walcheren op een diepte van circa 0,00 m+NAP. &lt;br&gt;- Door de erosie werking van deze kreek het Laagpakket van Wormer en het Hollandveen Laagpakket zijn (weg)geërodeerd.&lt;br&gt;- De kreek wellicht een post Romeinse datering heeft maar dit niet met zekerheid kan gesteld worden.&lt;br&gt;- Een lage verwachting bestaat op het voorkomen van vindplaatsen uit de Late IJzertijd en/of Romeinse tijd in de top van het Laagpakket van Walcheren.&lt;br&gt;- In de top van de jonge duinafzettingen (Laagpakket van Schoorl) rond circa 0,65/o,85 m+NAP vindplaatsen uit de Vroege Middeleeuwen kunnen worden verwacht, eventueel ook vindplaatsen die dateren van voor de aanleg van de ringwalburg (bewoning/begravingen). &lt;br&gt;- De aanwezigheid van de vroegmiddeleeuwse ringwalburg is genoegzaam bekend en geniet omwille van zijn uitzonderlijke karakter en informatiewaarde van rijkswege een beschermde status.&lt;br&gt;- Een lage tot middelhoge verwachting geldt op het voorkomen van vindplaatsen uit de Late Middeleeuwen in de afdekkende jonge duinoverstuivingen.&lt;br&gt;- Een lage verwachting geldt op het voorkomen van vindplaatsen uit de Nieuwe Tijd in de top van in de afdekkende jonge duinoverstuivingen (direct onder de verstoorde bovenlaag), wellicht te relateren aan de inrichting en gebruik van de tuin van buitenplaats Loverendale.&lt;/p&gt;
DOI: 10.15468/dl.m8hxau
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carcharhinus leucas, Fontitrygon garouaensis, Fontitrygon ukpam, Pristis clavata, Pristis pristis, Acipenser sturio, Anguilla anguilla, Anguilla bengalensis, Anguilla bicolor, Anguilla marmorata, Anguilla mossambica, Congresox talabonoides, Strophidon sathete, Uropterygius concolor, Dalophis boulengeri, Dalophis cephalopeltis, Pisodonophis boro, Pisodonophis cancrivorus, Yirrkala tenuis, Atherina boyeri, Atherina caspia, Atherinomorus duodecimalis, Teramulus kieneri, Teramulus waterloti, Bedotia albomarginata, Bedotia alveyi, Bedotia geayi, Bedotia leucopteron, Bedotia longianalis, Bedotia madagascariensis, Bedotia marojejy, Bedotia masoala, Bedotia tricolor, Rheocles alaotrensis, Rheocles derhami, Rheocles lateralis, Rheocles pellegrini, Rheocles sikorae, Rheocles vatosoa, Rheocles wrightae, Allenbatrachus meridionalis, Thalassophryne maculosa, Thalassophryne uranoscopus, Zenarchopterus dispar, Zenarchopterus gilli, Brycinus abeli, Brycinus affinis, Alestes ansorgii, Alestes baremoze, Brachyalestes bimaculatus, Brycinus bimaculatus, Brachyalestes carolinae, Brycinus carolinae, Brachyalestes comptus, Brycinus comptus, Alestes dentex, Brycinus ferox, Brachyalestes fwaensis, Brycinus fwaensis, Brycinus humilis, Brachyalestes jacksonii, Brycinus jacksonii, Brachyalestes kingsleyae, Brycinus kingsleyae, Alestes liebrechtsii, Alestes macrophthalmus, Brycinus minutus, Brycinus nigricauda, Brycinus opisthotaenia, Brycinus peringueyi, Brycinus sadleri, Alestes stuhlmannii, Brycinus taeniurus, Alestopetersius bifasciatus, Alestopetersius brichardi, Alestopetersius caudalis, Alestopetersius compressus, Alestopetersius hilgendorfi, Alestopetersius leopoldianus, Alestopetersius nigropterus, Alestopetersius smykalai, Alestopetersius tumbensis, Arnoldichthys spilopterus, Bathyaethiops breuseghemi, Bathyaethiops caudomaculatus, Bathyaethiops greeni, Brachypetersius altus, Phenacogrammus altus, Brachypetersius cadwaladeri)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((51.4741 -10.5904,51.6872 -10.0924,51.464 -9.7,51.5346 -9.2212,51.4094 -8.8834,51.0293 -8.7096,50.2991 -9.0646,50.2456 -9.492,50.6261 -9.8954,50.5382 -10.1732,50.6846 -10.5267,51.1274 -10.7274,51.4741 -10.5904))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031386-250827131500795/datasets/export for details.