cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/xf8wc-z0f30
title: Acetonema longum

description: Vegetative septa of A. longum
description: <strong>Tilt Series Date:</strong> 2011-04-18</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Acetonema longum</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Matson grew the cells</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-04-18-4/3dimage_25330/</p>2_full.rec,  Reconstruction (Pixel Size 1.9 nm), 42.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-04-18-4/3dimage_25330/2_full.rec"
        > <i class="download icon"></i> Download </a></p>

        11apr18d_gr2_002.mrc,  Tilt Series (Pixel Size 0.95 nm), 237.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-04-18-4/rawdata/11apr18d_gr2_002.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/yemnc-xqb40
title: CB15N, 10mM Galactose,high salt

description: Raw data files of CB15N, 10mM Galactose,high salt
description: <strong>Tilt Series Date:</strong> 2009-10-08</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: °, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -12.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Purification / Growth Conditions / Treatment:</strong> synchronized in 20x M2 salts, 10mM Galactose</p>
  aba2009-10-08-17_slicer8540.jpg: periplasmic vesicle, Caulobacter crescentus aba2009-10-08-17_slicer8542.jpg: periplasmic granules, Caulobacter crescentus
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2009-10-08-17/rawdata/</p>09oct08b_CB15NGalactose_026.st,  Tilt Series (Pixel Size 0.774 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2009-10-08-17/rawdata/09oct08b_CB15NGalactose_026.st"
        > <i class="download icon"></i> Download </a></p>

        09oct08b_CB15NGalactose_026.rec,  Reconstruction (Pixel Size 1.548 nm), 158.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2009-10-08-17/3dimage_8908/09oct08b_CB15NGalactose_026.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/anw2s-3fg88
title: C65_HuvecspNL24h_11122012

description: Whole cells were grown on Au finder grids and infected with pNLGFP. Sample frozen 24h post infection
description: <strong>Tilt Series Date:</strong> 2011-11-13</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: None μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> UCSFTomo</p>
<strong>Collaborators and Roles:</strong> pNLGFP proviral construct provided by Irvin Chen UCLA</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-11-13-31/rawdata/</p>12nov10_C65_HuvecspNL24h_AT7BT1_0004.mrc,  Tilt Series (Pixel Size 0.45 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-11-13-31/rawdata/12nov10_C65_HuvecspNL24h_AT7BT1_0004.mrc"
        > <i class="download icon"></i> Download </a></p>

        12nov10_C65_HuvecspNL24h_AT7BT1_0004_full.rec,  Reconstruction (Pixel Size 1.8 nm), 530.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-11-13-31/3dimage_23486/12nov10_C65_HuvecspNL24h_AT7BT1_0004_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/swmbx-sqn11
title: M222R chemoreceptor mutant

description: M222R HAMP mutant locked in 'CHeA inactivating state'
description: <strong>Tilt Series Date:</strong> 2010-03-19</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> John Parkinson </p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB medium, induced with salycilate (0.6 µM) for three hours, then penicillin treated for one hour </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-03-19-8/rawdata/</p>10mar19a_EcoliM222K_008.st,  Tilt Series (Pixel Size 0.632 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-03-19-8/rawdata/10mar19a_EcoliM222K_008.st"
        > <i class="download icon"></i> Download </a></p>

        10mar19a_EcoliM222K_008.rec,  Reconstruction (Pixel Size 0.632 nm), 278.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-03-19-8/3dimage_12793/10mar19a_EcoliM222K_008.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/awgbr-v0781
title: L256T chemotaxis mutant

description: L256T HAMP mutant locked in an 'CheA activating state'
description: <strong>Tilt Series Date:</strong> 2010-05-18</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> John Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB media with Chloramphenicol, induced with 0.6µM salicylate for 3 hours, penicillin treated for 1 hour</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-05-18-1/rawdata/</p>10apr05a_LEcoli256T_001.st,  Tilt Series (Pixel Size 0.632 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-05-18-1/rawdata/10apr05a_LEcoli256T_001.st"
        > <i class="download icon"></i> Download </a></p>

        10apr05a_LEcoli256T_001.rec,  Reconstruction (Pixel Size 0.632 nm), 524.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-05-18-1/3dimage_12691/10apr05a_LEcoli256T_001.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/56sf9-z2932
title: M259Q chemoreceptor mutant

description: M259Q HAMP mutant locked in 'CheA activating state'
description: <strong>Tilt Series Date:</strong> 2010-03-21</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> John Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB medium with Chloramphenicol, induced with salicylate (0.6 µM) for three hours, then penicillin treated for one hour</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-03-21-9/rawdata/</p>10mar21a_EcoliM259Q_011.st,  Tilt Series (Pixel Size 0.632 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-03-21-9/rawdata/10mar21a_EcoliM259Q_011.st"
        > <i class="download icon"></i> Download </a></p>

        10mar21a_EcoliM259Q_011.rec,  Reconstruction (Pixel Size 0.632 nm), 218.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2010-03-21-9/3dimage_12837/10mar21a_EcoliM259Q_011.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/khzkz-ee634
title: E.coli "strain11" A413T CheAoff

description: E.coli methylation site mutant locked in a CheA inactivating state
description: <strong>Tilt Series Date:</strong> 2011-08-18</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: °, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> mutant from John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> cells grown at 30C in TB to log phase, then treated with penicillin for one hour </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-08-18-17/rawdata/</p>Ecolistrain11_081811_0017.st,  Tilt Series (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-08-18-17/rawdata/Ecolistrain11_081811_0017.st"
        > <i class="download icon"></i> Download </a></p>

        Ecolistrain11_081811_0017.rec,  Reconstruction (Pixel Size 0.0 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-08-18-17/3dimage_15538/Ecolistrain11_081811_0017.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/s279z-x6a79
title: B. subtilis minicell lysate

description: B subtilis strain DK 720 minicell lysate
description: <strong>Tilt Series Date:</strong> 2013-09-05</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Dan Kearns</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Minicell isolation and Lysozyme lysis</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-05-17/rawdata/</p>Bacilluslysemini0019.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-05-17/rawdata/Bacilluslysemini0019.mrc"
        > <i class="download icon"></i> Download </a></p>

        Bacilluslysemini0019_part121_5.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-09-05-17/3dimage_30433/Bacilluslysemini0019_part121_5.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.16945670
title: Figure data for: Harnessing Cilia Oscillations for Enhanced Transport in Chaotic Flow

description: Figure data for: Harnessing Cilia Oscillations for Enhanced Transport in Chaotic Flow
DOI: 10.5281/zenodo.16945671
title: Figure data for: Harnessing Cilia Oscillations for Enhanced Transport in Chaotic Flow

description: Figure data for: Harnessing Cilia Oscillations for Enhanced Transport in Chaotic Flow
DOI: 10.60867/00000033
title: RNA sequencing data of two Lupin isogenic lines derived from the cross of 83A:275 and P27255

description: RNA-seq data from leaf tissues of Narrow-leaf Lupin isogenic lines (WD_Bi and WD_Sw) derived from the cross of 83A:275 (domesticated narrow-leafed lupin) and P27255 (wild narrow-leafed lupin) were selected to identify candidate alkaloid regulators Leaf tissues of the WD_Bi and WD_Sw were used for RNA extraction by Triture RNA extraction mix. The mRNA sequencing was performed on an Illumina Novaseq 6000 platform, and 150 bp paired-end reads were generated.
DOI: 10.22002/rx3wd-jc763
title: MLV 43D

description: wild type, WT, 1st batch
description: <strong>Tilt Series Date:</strong> 2013-11-19</p>
<strong>Data Taken By:</strong> Luiza Mendonca</p>
<strong>Species / Specimen:</strong> MLV</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Hung Fan</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2013-11-19-16/rawdata/</p>2013nov19_C183_1_43D_at1bt1_0013.mrc,  Tilt Series (Pixel Size 0.5 nm), 2.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2013-11-19-16/rawdata/2013nov19_C183_1_43D_at1bt1_0013.mrc"
        > <i class="download icon"></i> Download </a></p>

        2013nov19_C183_1_43D_at1bt1_0013_full.rec,  Reconstruction (Pixel Size 2.0 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lmm2013-11-19-16/3dimage_35907/2013nov19_C183_1_43D_at1bt1_0013_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/9we87-nax88
title: MP C1 27.5KX

description: Mycoplasma pneumonia C1 mutant
description: <strong>Tilt Series Date:</strong> 2010-01-01</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-01-31/rawdata/</p>10jan01b_B945b_042.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-01-31/rawdata/10jan01b_B945b_042.mrc"
        > <i class="download icon"></i> Download </a></p>

        10jan01b_B945b_042_full.rec,  Reconstruction (Pixel Size 1.548 nm), 419.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-01-31/3dimage_16467/10jan01b_B945b_042_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/kqs0n-0s727
title: sporulating Alongum purified sacculi

description: Alongum purified sacculi
description: <strong>Tilt Series Date:</strong> 2011-01-03</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Acetonema longum</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> sporulation medium</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-01-03-8/rawdata/</p>11jan03a_grid3_010.mrc,  Tilt Series (Pixel Size 0.95 nm), 738.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-01-03-8/rawdata/11jan03a_grid3_010.mrc"
        > <i class="download icon"></i> Download </a></p>

        10_full.rec,  Reconstruction (Pixel Size 1.9 nm), 876.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-01-03-8/3dimage_25625/10_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/te96t-8fs49
title: Vibrio cholerae

description: 11apr16a_
description: <strong>Tilt Series Date:</strong> 2011-04-16</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> 2740-80</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 0.0 eV/Å²,  defocus: 0.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
<strong>Collaborators and Roles:</strong> Mekalanos</p>
  mpa2011-04-16-17_slicer6233.jpg: Filament
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-04-16-17/rawdata/</p>11apr16a_VC9_023.mrc,  Tilt Series (Pixel Size 0.0 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-04-16-17/rawdata/11apr16a_VC9_023.mrc"
        > <i class="download icon"></i> Download </a></p>

        11apr16a_VC9_023_part.rec,  Reconstruction (Pixel Size 0.0 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-04-16-17/3dimage_34782/11apr16a_VC9_023_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/0a4c3-j8147
title: MP P200 27.5KX

description: Mycoplasma pneumonia P200 mutant, ok, crystal ball
description: <strong>Tilt Series Date:</strong> 2009-12-29</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-12-29-4/rawdata/</p>09dec29a_b613a_004.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-12-29-4/rawdata/09dec29a_b613a_004.mrc"
        > <i class="download icon"></i> Download </a></p>

        09dec29a_b613a_004_part.rec,  Reconstruction (Pixel Size 1.548 nm), 419.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-12-29-4/3dimage_16776/09dec29a_b613a_004_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.2yezwz
title: Occurrence Download

description: A dataset containing 315 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Populus nigra",
 "Country is New Zealand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 315 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044708-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/48m3j-vk583
title: MP PrkC 27.5KX

description: Mycoplasma pneumonia PrkC mutant, bad alignment
description: <strong>Tilt Series Date:</strong> 2010-01-02</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-02-21/rawdata/</p>10jan02b_B116a_024.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-02-21/rawdata/10jan02b_B116a_024.mrc"
        > <i class="download icon"></i> Download </a></p>

        10jan02b_B116a_024_part.rec,  Reconstruction (Pixel Size 1.548 nm), 419.4 MB  
        
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        > <i class="download icon"></i> Download </a></p>