cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/daw4af
title: Conservation, systematics and ultrastructure of the poorly known amblypygid species Charinus santanensis (Charontidae, Amblypygi) from Caatinga caves in Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Paredes-Munguia, Williams, Teixeira, Renato Augusto, Soares-Costa, Rafael, Ferreira, Rodrigo Lopes, Miranda, Gustavo Silva De (2025): Conservation, systematics and ultrastructure of the poorly known amblypygid species Charinus santanensis (Charontidae, Amblypygi) from Caatinga caves in Brazil. Zootaxa 5711 (4): 545-562, DOI: 10.11646/zootaxa.5711.4.5, URL: https://doi.org/10.11646/zootaxa.5711.4.5AbstractCharinus is the most speciose genus of the Charontidae, with the highest number of species in Brazil (43 spp). Almost half of these species are known to inhabit caves, a fragile ecosystem that is little known and is highly threatened by human activities. Eleven of the Brazilian species of Charinus occur only inside caves (troglobionts) being, therefore, an important component of cave ecosystems acting as one of the major cave predators. Here, we discuss conservation priorities and concerns for caves in northeastern Brazil, describe for the first time the female of Charinus santanensis and characterize the species hydrophobic coating and its crystals, a likely important protection for hot and humid environments, presenting comparison with its congeners.
DOI: 10.15156/bio/sh0170347.10fu
title: SH0170347.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0170348.10fu
title: SH0170348.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0170349.10fu
title: SH0170349.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0170350.10fu
title: SH0170350.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0170351.10fu
title: SH0170351.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0170352.10fu
title: SH0170352.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0170353.10fu
title: SH0170353.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.60893/figshare.jcp.30936539
title: Supplementary Material

description: See the supplementary material for additional details referenced in the text.
DOI: 10.60893/figshare.jcp.30936539.v1
title: Supplementary Material

description: See the supplementary material for additional details referenced in the text.
DOI: 10.15156/bio/sh0170354.10fu
title: SH0170354.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0170355.10fu
title: SH0170355.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0170356.10fu
title: SH0170356.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.34740/kaggle/dsv/14462249
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.68tt2c
title: Occurrence Download

description: A dataset containing 1647 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Callistemon viminalis",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1647 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032963-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5ry4e
title: Occurrence Download

description: A dataset containing 2896 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Larrea divaricata"
 ]
}

 The dataset includes 2896 records from 175 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032965-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.du8gpy
title: Occurrence Download

description: A dataset containing 561363 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Limosa lapponica)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 561363 records from 465 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032925-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yv36bn
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Panicum dichotomiflorum",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032970-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qbg9yp
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nassauvia pinnigera"
 ]
}

 The dataset includes 81 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032971-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.db8hmj
title: Occurrence Download

description: A dataset containing 1314 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pentas lanceolata",
 "HasCoordinate is true",
 "Geometry POLYGON ((-17.66889 -35.11691, 51.34702 -35.11691, 51.34702 37.62, -17.66889 37.62, -17.66889 -35.11691))"
 ]
}

 The dataset includes 1314 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032972-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c9rrz5
title: Occurrence Download

description: A dataset containing 876 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ilex pseudobuxus"
 ]
}

 The dataset includes 876 records from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032974-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6fw84y
title: Occurrence Download

description: A dataset containing 2972 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Passiflora mixta"
 ]
}

 The dataset includes 2972 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032977-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2pwg9k
title: Occurrence Download

description: A dataset containing 306 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ilex argentina"
 ]
}

 The dataset includes 306 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032978-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48758/ufz.15298
title: depth-averaged soil moisture observations at 46 locations in Germany

description: This archive contains volumetric soil moisture (SM) data [mm/mm] at 26 locations from different measurement types: single profile measurements (SPM), lysimeters (LYSI), and spatially distributed measurements (SDM). We acknowledge the TERENO community and FLUXNET community for providing soil moisture observational data. Special acknowledment goes to Katrin Schneider (KIT), Ralf Kiese (KIT), Hans-Jörg Vogel (UFZ), René Zahl (UFZ),  Christian Hohmann (GFZ), Ingo Heinrich (GFZ) for providing soil moisture observations. The TERENO and FLUXNET soil moisture data can be obtained at https://ddp.tereno.net/ddp/ and https://fluxnet.org/, respectively.

SM is averaged over sensors and for the respective depths 0-25cm, 0-60cm and 25-60cm as indicated in the publication: https://doi.org/10.5194/hess-26-5137-2022.



The R scripts for processing of SM sensor data are in included.

Data for the 20 CRNS measurements are found in https://doi.org/10.5194/essd-14-1125-2022.
DOI: 10.15468/dl.fx36j2
title: Occurrence Download

description: A dataset containing 9541 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Panicum dichotomiflorum",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9541 records from 307 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032979-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.usazw7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Fringilla coelebs)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032980-250717081556266/datasets/export for details.
DOI: 10.15468/dl.9ysm3c
title: Occurrence Download

description: A dataset containing 600 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Panicum dichotomiflorum",
 "Country is Germany",
 "HasCoordinate is true"
 ]
}

 The dataset includes 600 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032983-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u9akrp
title: Occurrence Download

description: A dataset containing 672712 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anemone nemorosa"
 ]
}

 The dataset includes 672712 records from 1863 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032864-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/494-xmx-0nw
title: Anethum foeniculum L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/700-jew-98s
title: Trifolium alpestre L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/brj-crd-fne
title: Valerianella coronata (L.) DC.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/823-6y4-raf
title: Nigella arvensis subsp. arvensis

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/pf0-dj9-w39
title: Stipa rechingeri Martinovský

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/k8m-pc0-82k
title: Trifolium phleoides Pourr. ex Willd.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/v4l-zhn-4b7
title: Trifolium phleoides Pourr. ex Willd.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/75d-faz-vyg
title: Asperula laevigata L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/bka-7k2-t5d
title: Bromus arvensis L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/s14-3m7-eas
title: Galium L.

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.