cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ocpppk
title: Occurrence Download

description: A dataset containing 72020 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-74.48181152343749 3.648837296001053, -74.48181152343749 5.001752740000537, -73.7896728515625 5.001752740000537, -73.7896728515625 3.648837296001053, -74.48181152343749 3.648837296001053))",
 "HasCoordinate is true",
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 72020 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007878-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gsvbes
title: Occurrence Download

description: A dataset containing 124 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Thylamys pusillus (Desmarest, 1804)",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 124 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007590-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jgwgv8
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 {
 "or" : [
 "Country is Argentina",
 "Country is Brazil",
 "Country is Uruguay"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Thalassarche melanophris melanophris"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016623-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xoxumz
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chaetomys subspinosus (Olfers, 1818)",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 11 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007878-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hktid5
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Venezuela (Bolivarian Republic of)",
 "Country is Bolivia (Plurinational State of)"
 ]
 },
 "TaxonKey is Cipura campanulata Ravenna"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000472-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gjukn5
title: Occurrence Download

description: A dataset containing 5208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Cochlearius cochlearius (Linnaeus, 1766)"
 ]
}

 The dataset includes 5208 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052571-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rjzky0
title: Occurrence Download

description: A dataset containing 39745456 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Year 1990-2018"
 ]
}

 The dataset includes 39745456 records from 6341 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007590-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.83czrh
title: Occurrence Download

description: A dataset containing 1074284 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Belgium, Germany, Netherlands)",
 "TaxonKey is one of (Ondatra zibethicus (Linnaeus, 1766), Myocastor coypus (Molina, 1782))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1074284 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013273-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6su8yh
title: Occurrence Download

description: A dataset containing 352 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-122.00349 35.97572,-121.49679 35.97572,-121.49679 36.55132,-122.00349 36.55132,-122.00349 35.97572))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Haliotis cracherodii Leach, 1814",
 "Year 2017-2024"
 ]
}

 The dataset includes 352 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013349-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y5qzrb
title: Occurrence Download

description: A dataset containing 211246 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belgium",
 "TaxonKey is one of (Aponogeton distachyos L.f., Arthurdendyus triangulatus (Dendy, 1895), Cabomba caroliniana A.Gray, Callosciurus finlaysonii (Horsfield, 1823), Cherax destructor Clark, 1936, Corvus splendens Vieillot, 1817, Crassula helmsii (Kirk) Cockayne, Elodea densa (Planch.) Casp., Eriocheir sinensis H.Milne Edwards, 1853, Erythranthe guttata (DC.) G.L.Nesom, Faxonius immunis (Hagen, 1870), Faxonius juvenilis (Hagen, 1870), Faxonius rusticus (Girard, 1852), Faxonius virilis (Hagen, 1870), Gambusia affinis (Baird & Girard, 1853), Heracleum mantegazzianum Sommier & Levier, Heracleum persicum Desf. ex Fisch., C.A.Mey. & Avé-Lall., Heracleum pubescens (Hoffm.) M.Bieb., Houttuynia cordata Thunb., Hydrocotyle ranunculoides L.f., Impatiens glandulifera Royle, Koenigia polystachya (Wall. ex Meisn.) T.M.Schust. & Reveal, Lagarosiphon major (Ridl.) Moss, Lepomis gibbosus (Linnaeus, 1758), Limnoperna fortunei (Dunker, 1857), Ludwigia grandiflora (Michx.) Greuter & Burdet, Ludwigia peploides (Kunth) P.H.Raven, Lysichiton americanus Hultén & H.St.John, Morone americana (Gmelin, 1789), Muntiacus reevesi (Ogilby, 1839), Myriophyllum aquaticum (Vell.) Verdc., Myriophyllum heterophyllum Michx., Pacifastacus leniusculus (Dana, 1852), Petasites japonicus (Siebold & Zucc.) Maxim., Pontederia cordata L., Procambarus acutus (Girard, 1852), Procambarus clarkii (Girard, 1852), Procambarus virginalis Lyko, 2017, Pseudorasbora parva (Temminck & Schlegel, 1846), Pycnonotus cafer (Linnaeus, 1766), Saururus cernuus L., Sciurus carolinensis Gmelin, 1788, Sciurus niger Linnaeus, 1758, Solenopsis invicta Buren, 1972, Solenopsis richteri Forel, 1909, Threskiornis aethiopicus (Latham, 1790), Vespa velutina Lepeletier, 1836, Zizania latifolia (Griseb.) Hance ex F.Muell.)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 211246 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013274-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rnu2jy
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Hosta shikokiana N.Fujita)"
 ]
}

 The dataset includes 13 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013350-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dabazt
title: Occurrence Download

description: A dataset listing the 424 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "Geometry POLYGON((-79.1517 43.04703,-79.13214 43.04703,-79.13214 43.05885,-79.1517 43.05885,-79.1517 43.04703))",
 "HasCoordinate is true"
 ]
}

 The dataset's 424 records were derived from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013348-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ggtvyb
title: Occurrence Download

description: A dataset containing 222 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "TaxonKey is Peziza varia (Hedw.) Alb. & Schwein."
 ]
}

 The dataset includes 222 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013351-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5nwe37
title: Occurrence Download

description: A dataset containing 1561 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Hosta sieboldiana (Hook.) Engl.)"
 ]
}

 The dataset includes 1561 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013352-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7sydmk
title: Occurrence Download

description: A dataset containing 1399 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Hosta sieboldii (Paxton) J.W.Ingram)"
 ]
}

 The dataset includes 1399 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013353-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vx6j8e
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA.3.11_1",
 "TaxonKey is Oncosiphon piluliferum (L.f.) Källersjö, 1988"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013354-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2w37gs
title: Occurrence Download

description: A dataset containing 222 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "TaxonKey is Peziza varia (Hedw.) Alb. & Schwein."
 ]
}

 The dataset includes 222 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013355-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/9899834
title: BBC News
DOI: 10.6084/m9.figshare.27707394
title: Results of ANOVA and Tukey post-hoc test

description: In the present study we aimed at elucidating whether exposure to chronic stress affects expression of cardiac MRs, and influences cardiac structure and function (transthoracic echocardiography), and whether blockade of MRs attenuates the stress-induced changes.
DOI: 10.5281/zenodo.8342730
title: GEOLAB-CENLIMIT

description: GEOLAB-CENLIMIT


CENTRIFUGE MODELLING OF DESATURATION FOR SOIL LIQUEFACTION MITIGATION: WAVE-BASED PERFORMANCE AND QUALITY CONTROL


The objective of the GEOLAB-CENLIMIT research plan is to evaluate the performance of soil desaturation as a technique for the mitigation of soil liquefaction by physical modelling. This objective will be done by carrying out physical models of Hostun sand in the geotechnical centrifuge of the Schofield Centre in the University of Cambridge, under different degrees of saturation. The physical models will enable to replicate the cyclic soil behaviour in free-field conditions, providing relevant insights about the performance of soil desaturation for liquefaction mitigation, which can be later applied in the design and assessment of critical infrastructures (e.g. road embankments, pipelines, bridges, hospitals, among others) founded in liquefiable soil deposits. For this purpose, the development of an experimental plan that includes cyclic tests in the Turner beam centrifuge of UCAM using air injection and measurements of seismic wave velocities, accelerations, displacements, and pore water build-up during testing is proposed. The objective is to evaluate the response of untreated and treated soil independently from the presence of any (infra)structure, by comparing of fully saturated against desaturated test results. It will then be possible to investigate the performance of air injection for soil desaturation and to assess the quality and homogeneity of the treatment. Based on these experiments, a clear understanding of the influence of the degree of saturation on soil behaviour against soil liquefaction, in free-field conditions, will be achieved.
DOI: 10.5281/zenodo.14155534
title: AF2 models for "Co-translational assembly promotes functional diversification of paralogous proteins" by Mallik, et al.

description: AF2 models used for analyses presented in "Co-translational assembly promotes functional diversification of paralogous proteins" by Saurav Mallik, Angel F. Cisneros, Christian R. Landry, and Emmanuel D. Levy.

These models were used to analyze the structural divergence of 3703 Obligatory Homomer, 697 Mixed, and 181 Obligatory Heteromer pairs.

Folders are separated into different categories:- Models of homomers (from Schweke et al., 2024. Cell):    . AF2_HM_full_models:  Full structures of homodimeric models.    . AF2_HM_nodiso3: Core structures of homomeric models, trimmed using scripts from Schweke et al. (2023).

- Models of heteromers (generated in this work):    . AF2_HET_full_models: Full structures of heterodimeric models.    . AF2_HET_nodiso3: Core structures of heteromeric models, trimmed using a modified version of the code from Schweke et al. (2023) to work with heterodimers.
DOI: 10.5281/zenodo.14155535
title: AF2 models for "Co-translational assembly promotes functional diversification of paralogous proteins" by Mallik, et al.

description: AF2 models used for analyses presented in "Co-translational assembly promotes functional diversification of paralogous proteins" by Saurav Mallik, Angel F. Cisneros, Christian R. Landry, and Emmanuel D. Levy.

These models were used to analyze the structural divergence of 3703 Obligatory Homomer, 697 Mixed, and 181 Obligatory Heteromer pairs.

Folders are separated into different categories:- Models of homomers (from Schweke et al., 2024. Cell):    . AF2_HM_full_models:  Full structures of homodimeric models.    . AF2_HM_nodiso3: Core structures of homomeric models, trimmed using scripts from Schweke et al. (2023).

- Models of heteromers (generated in this work):    . AF2_HET_full_models: Full structures of heterodimeric models.    . AF2_HET_nodiso3: Core structures of heteromeric models, trimmed using a modified version of the code from Schweke et al. (2023) to work with heterodimers.
DOI: 10.5281/zenodo.14158203
title: AF2 models for "Co-translational assembly promotes functional diversification of paralogous proteins" by Mallik, et al.

description: AF2 models used for analyses presented in "Co-translational assembly promotes functional diversification of paralogous proteins" by Saurav Mallik, Angel F. Cisneros, Christian R. Landry, and Emmanuel D. Levy.

These models were used to analyze the structural divergence of 3703 Obligatory Homomer, 697 Mixed, and 181 Obligatory Heteromer pairs.

Folders are separated into different categories:- Models of homomers (from Schweke et al., 2024. Cell):    . AF2_HM_full_models:  Full structures of homodimeric models.    . AF2_HM_nodiso3: Core structures of homomeric models, trimmed using scripts from Schweke et al. (2023).

- Models of heteromers (generated in this work):    . AF2_HET_full_models: Full structures of heterodimeric models.    . AF2_HET_nodiso3: Core structures of heteromeric models, trimmed using a modified version of the code from Schweke et al. (2023) to work with heterodimers.
DOI: 10.15468/dl.ubc2wj
title: Occurrence Download

description: A dataset containing 5424 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Clarias gariepinus (Burchell, 1822))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5424 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013356-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d4t2fj
title: Occurrence Download

description: A dataset containing 714687 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Denmark",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than 50000",
 "Year is 2005",
 "DecimalLongitude is greater than or equal to 7.0",
 "DecimalLongitude is less than or equal to 15.5",
 "DecimalLatitude is greater than or equal to 54.5",
 "DecimalLatitude is less than or equal to 58.0"
 ]
}

 The dataset includes 714687 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013307-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13908724
title: ROAG (Reaching Over A Grid): Dataset of Human Reaching Motions Over a Discretely Sampled Workspace

description: Joint absence in people with upper limb differences leads to compensatory motions. Such compensation has long been a topic of study, but typically only for a single object/user layout, which is unlikely to generalise across a workspace.To better understand how arm motion and compensatory movements vary over the workspace, we created the ROAG dataset. ROAG is pronounced 'Rogue' and stands for Reaching Over A Grid. The dataset was recorded at the GRAB Lab of Yale University (USA) and has since been processed at the Manipulation and Touch Lab of Imperial College London (UK). ROAG is a motion capture dataset involving arm and torso pose during reach-to-grasp actions for 49 equally spaced cylindrical targets, orientated horizontally or vertically. The data is collected from seven able-bodied participants and two transradial amputees who use prosthetic devices. In the case of able-bodied participants, different bracing systems were applied to the arm to immobilise wrist joints and simulate transradial limb loss, leading to compensatory motions. In total, the dataset consists of 2450 reaching trajectories. This resource hosts the collected dataset and the related MATLAB analysis files.The dataset has been the basis of the following publications:



A. J. Spiers, Y. Gloumakov and A. M. Dollar, "Transradial Amputee Reaching: Compensatory Motion Quantification Versus Unaffected Individuals Including Bracing," in IEEE Transactions on Medical Robotics and Bionics, vol. 6, no. 2, pp. 706-717, May 2024, https://doi.org/10.1109/TMRB.2024.3381339

Qihan Yang, Yuri Gloumakov, and Adam J. Spiers. "Multi-feature Compensatory Motion Analysis for Reaching Motions Over a Discretely Sampled Workspace." in IEEE RAS EMBS 10th International Conference on Biomedical Robotics and Biomechatronics (BioRob 2024), https://doi.org/10.48550/arXiv.2409.05871

Adam J Spiers, Yuri Gloumakov, Aaron M Dollar, "Examining the impact of wrist mobility on reaching motion compensation across a discretely sampled workspace", in IEEE 7th International Conference on Biomedical Robotics and Biomechatronics (BioRob 2018), https://doi.org/10.1109/BIOROB.2018.8487871
DOI: 10.5281/zenodo.13908725
title: ROAG (Reaching Over A Grid): Dataset of Human Reaching Motions Over a Discretely Sampled Workspace

description: Joint absence in people with upper limb differences leads to compensatory motions. Such compensation has long been a topic of study, but typically only for a single object/user layout, which is unlikely to generalise across a workspace.To better understand how arm motion and compensatory movements vary over the workspace, we created the ROAG dataset. ROAG is pronounced 'Rogue' and stands for Reaching Over A Grid. The dataset was recorded at the GRAB Lab of Yale University (USA) and has since been processed at the Manipulation and Touch Lab of Imperial College London (UK). ROAG is a motion capture dataset involving arm and torso pose during reach-to-grasp actions for 49 equally spaced cylindrical targets, orientated horizontally or vertically. The data is collected from seven able-bodied participants and two transradial amputees who use prosthetic devices. In the case of able-bodied participants, different bracing systems were applied to the arm to immobilise wrist joints and simulate transradial limb loss, leading to compensatory motions. In total, the dataset consists of 2450 reaching trajectories. This resource hosts the collected dataset and the related MATLAB analysis files.The dataset has been the basis of the following publications:



A. J. Spiers, Y. Gloumakov and A. M. Dollar, "Transradial Amputee Reaching: Compensatory Motion Quantification Versus Unaffected Individuals Including Bracing," in IEEE Transactions on Medical Robotics and Bionics, vol. 6, no. 2, pp. 706-717, May 2024, https://doi.org/10.1109/TMRB.2024.3381339

Qihan Yang, Yuri Gloumakov, and Adam J. Spiers. "Multi-feature Compensatory Motion Analysis for Reaching Motions Over a Discretely Sampled Workspace." in IEEE RAS EMBS 10th International Conference on Biomedical Robotics and Biomechatronics (BioRob 2024), https://doi.org/10.48550/arXiv.2409.05871

Adam J Spiers, Yuri Gloumakov, Aaron M Dollar, "Examining the impact of wrist mobility on reaching motion compensation across a discretely sampled workspace", in IEEE 7th International Conference on Biomedical Robotics and Biomechatronics (BioRob 2018), https://doi.org/10.1109/BIOROB.2018.8487871
DOI: 10.15468/dl.5utqrv
title: Occurrence Download

description: A dataset containing 410 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-122.00349 35.97572,-121.49679 35.97572,-121.49679 36.55132,-122.00349 36.55132,-122.00349 35.97572))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Haliotis cracherodii Leach, 1814",
 "Year 2009-2016"
 ]
}

 The dataset includes 410 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013358-241107131044228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14158423
title: Understanding Citywalk Through Social Media: A Spatial-Statistical Analysis in Shanghai

description: The uploaded file contains the original Citywalk social media posts, coordinates and classifications of different Citywalk POIs, sentiment scores, Shannon Diversity Index for different grids, public transport statistics, public transport accessibility statistics, green area statistics, and the Grid Citywalk Activity Index.