cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.20350/digitalcsic/12532
title: Seismic Imaging of the Moroccan Atlas (SIMA): a wide-angle reflection profile

description: A high-resolution controlled-source wide-angle reflection seismic experiment was carried out in Morocco in spring 2010. The energy released by six explosions was recorded by 939 Reftek 125a stations (Texans) from the IRIS instrument pool. The location of the shots had an average spacing of 70 km between them. The charge (approximately 1 TM) was distributed in 2–4 boreholes per shot point at depths of 30–60 m.
description: The crustal structure and topography of the Moho boundary beneath the Atlas Mountains of Morocco has been constrained by a controlled source, wide-angle seismic reflection transect: the SIMA experiment (Seismic Imaging of the Moroccan Atlas). It is a high resolution seismic profile acquired from the Sahara craton across the High and the Middle Atlas and the Rif Mountains.
DOI: 10.20350/digitalcsic/12663
title: Trait-based ecology tools in R

description: Functional ecology is the branch of ecology that focuses on various functions that species play in the community or ecosystem in which they occur. The present R material is accompanying the book “Handbook of trait-based ecology: from theory to R tools” (Cambridge University Press) which offers the main concepts and tools in trait-based ecology, and their tricks, covering different trophic levels and organism types. The book, and this accompanying R material, are designed for students, researchers and practitioners who wish to get a handy synthesis of existing concepts, tools and trends in trait-based ecology, and wish to apply it to their own field of interest. For 9 of the 12 chapters of the book, specific R material is presented here. Exercises specifically designed to be run in R, are included, along with accompanying on-line resources including solutions for exercises and R functions, and updates reflecting current developments in this fast-changing field. This R material includes different type of indices of biodiversity and the typical toolbox for a functional ecologist. Based on more than a decade of teaching experience, the authors developed and improved the way theoretical aspects and analytical tools of trait-based ecology are best explained and introduced to readers.
description: General introduction R material Ch2: trait databases R material Ch3: trait dissimilarity R material Ch4: species level analyses R material Ch5: community weighted mean R material Ch5: functional diversity R material Ch6: intraspecific trait variability R material Ch7: community assembly R material Ch8: traits and phylogeny R material Ch9: linking traits to ecosystem functions R material Ch10: multi-trophic trait analyses
DOI: 10.20350/digitalcsic/12623
title: The ILIHA deep seismic sounding experiment (Iberian LIthosphere Heterogeneity and Anisotropy)

description: Ten shots were fired offshore with charges between 500 and 1000 kg. Five land shot (lang quarry blasts) were fired in two points (G and P).
description: The ILIHA (Iberian Lithosphere Heterogeneity and Anisotropy) Project was designed to be a large-scale test for vertical and lateral heterogeneity and seismic anisotropy in the subcrustal lithosphere over the Variscan domain of the Iberian Peninsula. It consists of a star-shaped arrangement of six long-range deep seismic sounding profiles, acquired in 1989.
DOI: 10.20350/digitalcsic/12685
title: Litospheric Structure of the North Iberian Margin: MARCONI-WA reflection profiles

description: An onshore-offshore network of 24 Ocean-Bottom Seismometers or Hydrophones (12 OBS and 8 OBH) and 35 land stations deployed in 46 different sites. The OBS/OBH network remained fixed during all the experiment and covered on place all the profile intersections, with an average spacing of 30–40 km. The land seismic stations were deployed with an average spacing of 10–15 km extending the N-S profiles onshore, with some additional instruments following the shoreline. The seismic source consisted of a Bolt airgun array fired every 40 s, resulting in a shot spacing of 100 m. The shooting pressure was set constant at 140 bars.
description: Ruiz Fernández, Mario; mruiz@geo3bcn.csic.es
description: MARCONI (MARgen COntinental Nord Iberico - North Iberian Continental Margin) is a deep seismic reflection survey carried out in the southeastern part of the Bay of Biscay in September 2003. It included the acquisition of 11 multichannel and wide-angle deep seismic reflection profiles covering a total length of 2000 km.
DOI: 10.20350/digitalcsic/13824
title: Research data supporting "Frequency-resolved photon correlations in cavity optomechanics"

description: We include the dataset corresponding to the figures of the paper "Frequency-resolved photon correlations in cavity optomechanics" by Mikolaj K. Schmidt, Ruben Esteban, Geza Giedke, Javier Aizpurua, and Alejandro González-Tudela, published in the journal Quantum Science and Technology with DOI: 10.1088/2058-9565/abe569. The set includes data to generate: spectra, frequency maps, and linear plots in the paper.
DOI: 10.20350/digitalcsic/13703
title: OLEUM Project. Formulations of Rancid and Winey-Vinegary Artificial Olfactory Reference Materials (AORMs) for Virgin Olive Oil Sensory Evaluation [Dataset]

description: Content of the file OLEUM_Portable_ReferenceMaterials_VOO.xlsx/.ods: • Volatile markers: this sheet contains data of volatile markers of the virgin olive oils sensory defects winey-vinegary and rancid, sensory characteristics and corresponding odor threshold relating to an oil matrix. • Relative areas: this sheet contains data of relative areas of volatile compounds selected to emulate winey-vinegary and rancid defects in VOOs in a set of 60 samples and in RMs provided by the International Olive Council for each of the defects (RM IOC). • Formulations RM AV: this sheet contains data of the main formulations (volatile compounds and concentrations in mg/kg) emulating winey-vinegary aroma in virgin olive oil and evaluation by assessors in terms of suitability as possible RM. • Formulation RM R: this sheet contains the data of the main formulations (volatile compounds and concentrations in mg/kg) emulating rancid aroma in virgin olive oil and evaluation by assessors about their eligibility as possible RM.
description: This data set contains the underlying data of the scientific publication: Aparicio-Ruiz R., Barbieri S., Gallina Toschi T., García-González D.L. (2020). Formulations of Rancid and Winey-Vinegary Artificial Olfactory Reference Materials (AORMs) for Virgin Olive Oil Sensory Evaluation. Foods, 9 (12), 1870, https://doi.org/10.3390/foods9121870. Panel test is the only sensory method included in international regulations of virgin olive oils and its application is compulsory. At present, there is no reference material (RM), in the strict sense of the term, to be used as a validated standard for sensory defects of virgin olive oil with which tasters can be trained. Usually, real samples of virgin olive oils assessed by many panels for the International Olive Council (IOC) ring tests are used as materials of reference in panel training and control. These data correspond to the work carried out to formulate RM that emulate rancid and winey-vinegary defects found in virgin olive oils with the aim of providing reproducible RMs that can be prepared on demand. Under the criteria of representativeness, verified with the advice of the IOC, aroma persistence, and simplicity in formulation, two RMs for winey-vinegary and rancid were obtained by diluting acetic acid and ethanol (winey-vinegary defect) and hexanal (rancid defect) together with other compounds that are used to modify aroma and avoid non-natural sensory notes.
DOI: 10.20350/digitalcsic/12622
title: Length/weight relationship for horned octopus based on Jereb et al. (2015). Equation: W = 1.62(ML)^2.27. Abbreviations: W = weight (g), ML = mantle length (cm). Reference: Jereb, P., A. L. Allcock, E. Lefkaditou, U. Piatkowski, L. C. Hastie, and G. J. Pierce. 2015. Cephalopod biology and fisheries in Europe: II. Species Accounts. ICES Cooperative Research Report No. 325. 360 pp. [Dataset]

description: This is a contribution to the Initiative AFOC (Shape analysis of cephalopods' beaks; ICM-CSIC)
DOI: 10.20350/digitalcsic/12709
title: Aerosol chemistry and soluble iron in Tenerife, Barbados and Miami in summer 2015 - dataset

description: This dataset contains data of aerosol chemistry and soluble iron collected in Tenerife, Barbados and Miami in summer 2015 within the frame of the project AEROATLAN (reference CGL2015-66299-P), funded by the Minister of Economy and Competitiveness of Spain and by the European Regional Development Fund.
DOI: 10.20350/digitalcsic/12713
title: Survey 'Scientific Culture, Perception and Attitudes towards Science and Innovation in the Spanish Business Sector'. Dataset
title: Encuesta 'Cultura Científica, Percepción y Actitudes ante la Ciencia y la Innovación en el Sector Empresarial Español'. Fichero de datos

description: The ‘Scientific Culture at Enterprises’ (SCe) project aims to identify the different factors that characterize the image of science held by entrepreneurs and business managers, explore the relationships among these factors, and shed light on the role they play in defining this image and ultimately in developing a culture of science in the business sector. This dataset includes the raw data of the survey 'Scientific Culture, Perception and Attitudes towards Science and Innovation in the Spanish Business Sector', carried out with a specially designed telephone survey questionnaire of a representative sample of Spanish companies.
description: El proyecto 'Cultura Científica Empresarial' tiene como objetivo identificar los factores que caracterizan la imagen de la ciencia de los empresarios y directivos de empresas, explorar las relaciones entre estos factores e investigar su papel en la definición de una cultura científica en el sector empresarial. El presente conjunto de datos procede de la encuesta 'Cultura Científica, Percepción y Actitudes ante la Ciencia y la Innovación en el Sector Empresarial Español', realizada telefónicamente a una muestra representativa de las empresas españolas.
description: - Survey technical details (Ficha técnica de la encuesta): File ‘TechnicalDetails_Español+English': - Codebook and coding standards followed for all variables (Libro de códigos y codificación utilizada para todas las variables): Files ‘Codebook' and ‘LibroCodigos'; - Syntax (Sintaxis): Files 'Syntax' and 'Sintaxis'; - Microdata ASCII (Microdatos ASCII): File 'MicrodataASCII'; - Questionnaire in Spanish and English (Cuestionario en español e inglés): File ‘Questionaire_Español+English’
DOI: 10.20350/digitalcsic/12618
title: Data from: Effects of Chemical and Auditory Cues of Hoopoes (Upupa epops) in Repellence and Attraction of Blood-Feeding Flies

description: It contains data collected in Guadix, Granada (southeast Spain) in 2019, in the framework of a research to evaluate the effects of chemical and auditory cues of hoopoes (Upupa epops) in repellence and attraction of blood-feeding flies. Dataset includes number of mosquitoes, blackflies and biting midges collected in insect traps in the field in four habitat types and two sampling periods, in relation to different chemical and auditory stimuli derived from nestlings of this bird species.
DOI: 10.20350/digitalcsic/12536
title: Mean and standard error of aerosol particles concentrations of various fractions in the range 10-420 nm on three streets in Madrid during the benchmark and monitoring campaigns undertaken within the project Life+ Photoscaling

description: A step toward better understanding of the possible aerosol release from photocatalytic pavements and evaluation of their environmental impacts was made in the recently concluded project (Castellote, 2019). This study was carried out in the project Life+ Photoscaling. It is aimed at assessment of aerosol concentrations at the street, where a photocatalytic pavement was placed. As the concentrations of aerosol particles in urban air depend on many factors including the air circulation patterns, exhaust and non-exhaust sources they are prone to spatial and temporal variations according to hour of day, day of week and season. Hence, it was very important to choose a reliable benchmark, which would allow to assess the effect of photocatalytic pavement on the air contamination by fine and ultrafine particles regardless of temporal variations. The coating was applied on José Antonio de Armona street (A street hereinafter) in Arganzuela district in downtown Madrid. For a primary benchmarking the number particle concentrations were measured on street A before the material application. Furthermore, two neighbouring streets: Bernardino Obregón (B) and Ronda de Valencia (C) were additionally chosen for benchmarking.
description: 1.Dataset of aerosol particle concentrations on three streets.-- 2. Windrose dataset during benchmark period.-- 3. Windrose dataset during monitoring period
DOI: 10.20350/digitalcsic/12586
title: Otic neurogenesis is regulated by TGFβ in a senescence-independent manner dataset
DOI: 10.5281/zenodo.13907508
title: QCA-2024-SCC-MR59306 R&D data

description: Project Code: QCA-2024-SCC-MR59306.This project is classified as CONFIDENTIAL. All information, data, and results associated with this project are strictly restricted to authorized personnel only. Any dissemination, distribution, or copying of the project details is strictly prohibited without prior approval from the project lead and the university's Office of Research Compliance.
DOI: 10.5281/zenodo.13907509
title: QCA-2024-SCC-MR59306 R&D data

description: Project Code: QCA-2024-SCC-MR59306.This project is classified as CONFIDENTIAL. All information, data, and results associated with this project are strictly restricted to authorized personnel only. Any dissemination, distribution, or copying of the project details is strictly prohibited without prior approval from the project lead and the university's Office of Research Compliance.
DOI: 10.20350/digitalcsic/10525
title: Modelling pest dynamics under uncertainty in pest detection: The case of the Red Palm Weevil. Biological Invasions [Dataset]

description: The data file contains data on Canary Island date palms Phoenix canariensis located in public gardens within Palma city and monitored between 2011 and 2017. We coded yearly observations on each palm (first seven columns on the excel file) into individual histories using the four following codes: 1 = palm tree apparently healthy (i.e. with no signs of weevil infestation); 2 = palm tree infested by red palm weevil and treated with a partial pruning (i.e. curative treatment); 3 = palm tree infested by red palm weevil and treated with a total cut (i.e. destructive treatment);0 = palm tree that no longer exist due to a destructive treatment applied the previous year. Columns 8 to 15 indicate the individual covariates used as linear predictors of infestation probabilities: the number of palms (P. canariensis and P. dactylifera) within a 500 m radius from each palm monitored. We sorted palms into public (“public”, i.e. those directly managed by the city council) and private (“priv”), differentiating in this last case between palms under the responsibility of other governmental entities (e.g. schools, namely “ent”) and those belonging to particular owners in private areas (e.g. hotels or other private gardens, namely “part”).
description: This dataset was used to analyze the infestation probabilities of Canary Island date palms by Red palm weevils.
DOI: 10.20350/digitalcsic/13833
title: Database associated to Alonso et al. (2021)

description: Summary of the data from figures and tables presented in Alonso A.A., X.A. Álvarez-Salgado, L.T. Antelo (2021). Assessing the impact of shellfish aquaculture on the carbon trading economy. Journal of Cleaner Production 279, 123873. DOI: 10.1016/j.jclepro.2020.123873
DOI: 10.20350/digitalcsic/13882
title: Night and day feeding rates of different generations and different stages of the copepods Centropages typicus and Paracartia grani [Dataset]

description: Marine planktonic copepods frequently exhibit diel feeding cycles coupled with vertical migrations. However, copepod feeding rhythms can be influenced by factors others than different food availability between layers. In this study, we determined the changes in the diel feeding behaviour of two marine copepod species (Centropages typicus and Paracartia grani) through multigenerational laboratory rearing, ontogeny, and upon the exposure to predator chemical cues. The wild females of both C. typicus and P. grani showed marked feeding rhythms with higher ingestion rates at night. The diel rhythms of C. typicus were maintained in the first laboratory-reared generation (F1), suggesting maternal effects, but disappeared in the following generations. The P. grani females of a long-term culture (&gt; 10 years) also showed no differences in their day–night feeding activity. Ontogenetic variations were detected in the F1 generation of C. typicus: feeding rhythms were absent in naupliar stages, but adults fed more intensely at night. In the case of the cultured P. grani, in general none of the stages showed feeding rhythms. Laboratory-reared C. typicus (8–11 generations) did not recover back the natural cyclic feeding when exposed to jellyfish and fish exudates, indicating that either predation risk does not significantly affect their diel feeding activity or predator-induced responses in marine copepods might not involve chemical signalling. Our study confirms that feeding-related functional traits of marine copepods can experience quick multigenerational changes in the laboratory; consequently, cultured copepods might not be good models for studies involving their diel feeding behaviour
description: Number of experiment, date of experiment, temperature, bottle volume, prey species, prey species AphiaID, copepod species, copepod species AphiaID, copepod generation, copepod stage, day/night, presence/absence of predator exudates, predator species, predator species AphiaID, prey concentration, prey size, number of copepods per bottle, copepod size, incubation time, clearance rate, ingestion rate
DOI: 10.20350/digitalcsic/13870
title: Ceramide kinase inhibition blocks IGF-1-mediated survival of otic neurosensory progenitors by impairing AKT phosphorylation Dataset

description: The raw data has been collected on each page, together with their statistical analysis for each figure.
description: Sphingolipids are bioactive lipid components of cell membranes with important signal transduction functions in health and disease. Ceramide is the central building block for sphingolipid biosynthesis and is processed to form structurally and functionally distinct sphingolipids. Ceramide can be phosphorylated by ceramide kinase (CERK) to generate ceramide-1-phosphate, a cytoprotective signaling molecule that has been widely studied in multiple tissues and organs, including the developing otocyst. However, little is known about ceramide kinase regulation during inner ear development. Using chicken otocysts, we show that genes for CERK and other enzymes of ceramide metabolism are expressed during the early stages of inner ear development and that CERK is developmentally regulated at the otic vesicle stage. To explore its role in inner ear morphogenesis, we blocked CERK activity in organotypic cultures of otic vesicles with a specific inhibitor. Inhibition of CERK activity impaired proliferation and promoted apoptosis of epithelial otic progenitors. CERK inhibition also compromised neurogenesis of the acoustic-vestibular ganglion. Insulin-like growth factor-1 (IGF-1) is a key factor for proliferation, survival and differentiation in the chicken otocyst. CERK inhibition decreased IGF-1-induced AKT phosphorylation and blocked IGF-1-induced cell survival. Overall, our data suggest that CERK is activated as a central element in the network of anti-apoptotic pro-survival pathways elicited by IGF-1 during early inner ear development.
DOI: 10.20350/digitalcsic/13883
title: Night and day egestion rates of the copepod Centropages typicus in the presence and the absence of the predator Meganyctiphanes norvegica [Dataset]

description: Predators can induce changes in the diel activity patterns of marine copepods. Besides vertical migration, diel feeding rhythms have been suggested as an antipredator phenotypic response. We conducted experiments to assess the non-lethal direct effects of the predator Meganyctiphanes norvegica (northern krill) on the diel feeding patterns of the calanoid copepod Centropages typicus. We also analysed the inﬂuence of seasonal photoperiod and prey availability on the intensity of copepod feeding rhythms. We did not detect any large effect of krill presence on the diel feeding behaviour of copepods, either in day-night differences or total daily ingestions. Seasonal photoperiod and prey availability, however, signiﬁcantly affected the magnitude of copepod feeding cycles, with larger diel differences in shorter days and at lower prey concentrations. Therefore, the role of non-lethal direct effects of predators on the diel feeding activity of marine copepods remain debatable and might not be as relevant as in freshwater zooplankton
description: Number of experiment, date of experiment, temperature, bottle volume, prey species, prey species AphiaID, copepod species, copepod species AphiaID, predator species, predator species AphiaID, day/night, predator/no predator, prey concentration, prey size, number of copepods per bottle, copepod size, number of predators per bottle, predator size, incubation time, number of copepod faecal pellets, faecal pellet volume
DOI: 10.20350/digitalcsic/12674
title: Curated phage lysins collection including identifiers, amino acid sequences, functional domain predictions, architectures and physicochemical properties calculations

description: Two comma-separated values (CSV) files named 'lysins_rf.csv' and 'lysins_pf.csv', the first one containing the full list of lysin entries (with GenBank/RefSeq sequence identifiers, amino acid sequences, bacterial hosts data, architectural information and sequence-based physicochemical calculations) and the second one comprising the domain sequence predictions performed on the aforementioned lysins according to PfamScan (https://www.ebi.ac.uk/Tools/pfa/pfamscan/)
description: Collection of phage lysin sequences retrieved from previously published genomic data; collected, curated, analysed and provided as part of the work "Sequence-function relationships in phage-encoded bacterial cell wall lytic enzymes and their implications for phage-derived products design", published in XXXXX (202X).