cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7270/q2f76ftg
title: BindingDB Entry 50049054: Proof of concept study for designed multiple ligands targeting the dopamine D2, serotonin 5-HT2A, and muscarinic M1 acetylcholine receptors.

description: Small molecule binding data for protein 5-hydroxytryptamine receptor 2A, D(2) dopamine receptor, and Melanin-concentrating hormone receptor, Uniprot P14416
DOI: 10.7270/q2g44sf6
title: BindingDB Entry 50048295: Bifunctional Inhibitors as a New Tool To Reduce Cancer Cell Invasion by Impairing MMP-9 Homodimerization.

description: Small molecule binding data for protein Collagenase, Matrix metalloproteinase-1 (MMP1), and Matrix metalloproteinase-14 (MMP14), Uniprot P03956, P08253, P14780, and P50281
DOI: 10.7270/q2j38vtr
title: BindingDB Entry 50049061: (+)-and (-)-Phenazocine enantiomers: Evaluation of their dual opioid agonist/s

description: Small molecule binding data for protein Kappa-type opioid receptor, Nociceptin/mu opioid receptor, Opioid receptors; mu & delta, Opioid receptors; mu/kappa/delta, Sigma non-opioid intracellular receptor 1, Sigma-1 receptor, and mu/kappa opioid receptor, Uniprot O55242, P33535, P41143, P41144, P41145, P97266, and Q60492
DOI: 10.7270/q2ns0x5v
title: BindingDB Entry 50049060: Targeting telomerase with radiolabeled inhibitors.

description: Small molecule binding data for protein Telomerase reverse transcriptase, Uniprot O14746
DOI: 10.7270/q2pk0j9b
title: BindingDB Entry 50048301: TBA

description: Small molecule binding data for protein Similar to alpha-tubulin isoform 1
DOI: 10.7270/q2sj1nvq
title: BindingDB Entry 50049059: Synthesis and evaluation of xanthine oxidase inhibitory and antioxidant activities of 2-arylbenzo[b]furan derivatives based on salvianolic acid C.

description: Small molecule binding data for protein Xanthine dehydrogenase/oxidase, Uniprot P47989
DOI: 10.7270/q2tb1912
title: BindingDB Entry 50048300: TBA

description: Small molecule binding data for protein Serotonin 2 (5-HT2) receptor, Uniprot P08909, P14842, and P30994
DOI: 10.7270/q2x92dj0
title: BindingDB Entry 50049058: Potent Small Agonists of Protease Activated Receptor 2.

description: Small molecule binding data for protein Proteinase-activated receptor 2, Uniprot P55085
DOI: 10.7270/q2z321st
title: BindingDB Entry 50048299: TBA

description: Small molecule binding data for protein Leukocyte elastase, Uniprot P08246
DOI: 10.5281/zenodo.3576025
title: Example DICOM RT Structure

description: Example DICOM RT Structure
DOI: 10.5281/zenodo.3576026
title: Example DICOM RT Structure

description: Example DICOM RT Structure
DOI: 10.7270/q2028tsk
title: BindingDB Entry 50049073: Design and synthesis of emodin derivatives as novel inhibitors of ATP-citrate lyase.

description: Small molecule binding data for protein ATP-citrate synthase, Uniprot P16638 and P53396
DOI: 10.7270/q21v5h4f
title: BindingDB Entry 50048306: TBA

description: Small molecule binding data for protein Human immunodeficiency virus type 1 protease
DOI: 10.7270/q23t9kgj
title: BindingDB Entry 50049072: Design and synthesis of novel 2-substituted 11-keto-boswellic acid heterocyclic derivatives as anti-prostate cancer agents with Pin1 inhibition ability.

description: Small molecule binding data for protein Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, Uniprot Q13526
DOI: 10.7270/q24t6mnc
title: BindingDB Entry 50049064: An evaluation of central penetration from a peripherally administered oxytocin receptor selective antagonist in nonhuman primates.

description: Small molecule binding data for protein Oxytocin receptor, Uniprot P30559
DOI: 10.7270/q25m67w6
title: BindingDB Entry 50048305: TBA

description: Small molecule binding data for protein Thrombin and coagulation factor VII, Trypsin, and Urokinase-type plasminogen activator/surface receptor, Uniprot P00734, P00749, and P07477
DOI: 10.7270/q27m0b6t
title: BindingDB Entry 50049071: Pyrimidine-Based Inhibitors of Dynamin I GTPase Activity: Competitive Inhibition at the Pleckstrin Homology Domain.

description: Small molecule binding data for protein 5-hydroxytryptamine receptor 2A, D(2) dopamine receptor, Dynamin-2, Histamine H1 receptor, Histamine H2 receptor, Kappa-type opioid receptor, Melanocortin receptor 4, Monoamine transporters; serotonin & dopamine, Muscarinic acetylcholine receptor M1, Muscarinic acetylcholine receptor M3, Neurokinin 2 receptor, Serotonin (5-HT) receptor, Serotonin receptor (2b and 2c), and Sodium-dependent noradrenaline transporter, Uniprot P11229, P14416, P20309, P21452, P23975, P25021, P32245, P34969, P35367, P41595, P47898, P50406, P50570, and Q01959
DOI: 10.7270/q29c70mx
title: BindingDB Entry 50048304: TBA

description: Small molecule binding data for protein Voltage-dependent L-type calcium channel subunit alpha-1S
DOI: 10.7270/q2cc12zk
title: BindingDB Entry 50049070: Synthesis of Novel c(AmpRGD)-Sunitinib Dual Conjugates as Molecular Tools Targeting thea

description: Small molecule binding data for protein ITGA5/ITGB1, ITGAV/ITGB3, ITGAV/ITGB5, Platelet-derived growth factor receptor beta, and Vascular endothelial growth factor receptor 2 and tyrosine-protein kinase TIE-2 (KDR and TIE2), Uniprot P05106, P05556, P06756, P08648, P09619, P18084, and P35968
DOI: 10.7270/q2d50q4j
title: BindingDB Entry 50048311: TBA

description: Small molecule binding data for protein Protein kinase C, PKC; classical/novel, Uniprot O94806, P05129, P05771, P17252, P24723, Q02156, Q04759, Q05655, and Q15139
DOI: 10.7270/q2h41tpx
title: BindingDB Entry 50049069: Structure-activity relationships of benzothiazole GPR35 antagonists.

description: Small molecule binding data for protein G-protein coupled receptor 35, Uniprot Q9HC97
DOI: 10.7270/q2hx1fvj
title: BindingDB Entry 50048310: TBA

description: Small molecule binding data for protein Protein kinase C (PKC) and cAMP-dependent protein kinase catalytic subunit gamma, Uniprot O94806, P05129, P05771, P17252, P22612, P24723, P41743, Q02156, Q04759, Q05513, Q05655, and Q15139
DOI: 10.7270/q2jw8h2p
title: BindingDB Entry 50048302: TBA

description: Small molecule binding data for protein Carbonic anhydrase 6, Uniprot P18915
DOI: 10.7270/q2mw2kcw
title: BindingDB Entry 50049068: Structure-Activity Relationships of Small Molecule Autotaxin Inhibitors with a Discrete Binding Mode.

description: Small molecule binding data for protein Autotaxin, Uniprot Q13822
DOI: 10.7270/q2np26k8
title: BindingDB Entry 50048309: TBA

description: Small molecule binding data for protein Phosphodiesterase 3, Uniprot Q13370 and Q14432
DOI: 10.7270/q2rj4mrs
title: BindingDB Entry 50049067: An Orally Active Bradykinin B

description: Small molecule binding data for protein Bradykinin B1 receptor and Trypsin I, Uniprot P00760 and P46663
DOI: 10.7270/q2sb47xq
title: BindingDB Entry 50048308: TBA

description: Small molecule binding data for protein Avian myoblastosis virus polyprotein II and Human immunodeficiency virus type 1 reverse transcriptase
DOI: 10.7270/q2w95cf2
title: BindingDB Entry 50049066: Discovery of Novel, Highly Potent, and Selective Matrix Metalloproteinase (MMP)-13 Inhibitors with a 1,2,4-Triazol-3-yl Moiety as a Zinc Binding Group Using a Structure-Based Design Approach.

description: Small molecule binding data for protein ADAM17, Collagenase, Matrix metalloproteinase (1 and 13), Matrix metalloproteinase (2 and 3), Matrix metalloproteinase 10, Matrix metalloproteinase 14, Matrix metalloproteinase 2/9, and Matrix metalloproteinase 7, Uniprot P03956, P08253, P08254, P09237, P09238, P14780, P22894, P45452, P50281, and P78536
DOI: 10.7270/q2x350m0
title: BindingDB Entry 50048307: TBA

description: Small molecule binding data for protein Somatostatin receptor, Uniprot O08858, P28646, P30680, P30872, P30873, P30874, P30875, P30935, P30936, P30937, P30938, P31391, P32745, P35346, and P49660
DOI: 10.18739/a26m3340d
title: Arctic Tidal Current Atlas from Moored Current Observations, Arctic Ocean, 1998-2018

description: Tidal and wind-driven near-inertial currents play a vital role in the changing Arctic climate and the marine ecosystems. We compiled over 420 available moored current observations taken over the last two decades throughout the Arctic to assemble a pan-Arctic atlas of tidal band currents. The atlas contains different tidal current products designed for the analysis of tidal parameters from monthly to inter-annual time scales. On shorter time scales, wind-driven inertial currents cannot be analytically separated from dominant tidal constituents. Thus, we include 10-30 hour band-pass filtered currents, containing all semidiurnal and diurnal tidal constituents as well as wind-driven inertial currents for the analysis of high-frequency variability of ocean dynamics. This allows for a wide range of possible uses, including local case studies of baroclinic tidal currents, assessment of long-term trends in tidal band kinetic energy and Arctic-wide validation of ocean models. Furthermore, this atlas may be a valuable tool for industrial applications such as fisheries, navigation and offshore construction. Included in this dataset are individual mooring records, in addition to a zipped directory of all records.
DOI: 10.18739/a2bc3sx4r
title: Arctic Tidal Current Atlas from Moored Current Observations - individual netcdf files, Arctic Ocean, 1998-2018

description: Tidal and wind-driven near-inertial currents play a vital role in the changing Arctic climate and the marine ecosystems. We compiled over 420 available moored current observations taken over the last two decades throughout the Arctic to assemble a pan-Arctic atlas of tidal band currents. The atlas contains different tidal current products designed for the analysis of tidal parameters from monthly to inter-annual time scales. On shorter time scales, wind-driven inertial currents cannot be analytically separated from dominant tidal constituents. Thus, we include 10-30 hour band-pass filtered currents, containing all semidiurnal and diurnal tidal constituents as well as wind-driven inertial currents for the analysis of high-frequency variability of ocean dynamics. This allows for a wide range of possible uses, including local case studies of baroclinic tidal currents, assessment of long-term trends in tidal band kinetic energy and Arctic-wide validation of ocean models. Furthermore, this atlas may be a valuable tool for industrial applications such as fisheries, navigation and offshore construction. Included in this dataset are individual mooring records, in addition to a zipped directory of all records.
DOI: 10.7270/q20v8fxr
title: BindingDB Entry 50048314: TBA

description: Small molecule binding data for protein Muscarinic acetylcholine receptor, Uniprot P08482, P08483, P08485, P08911, and P10980
DOI: 10.7270/q22v2jbq
title: BindingDB Entry 50049080: Benzylideneoxymorphone: A new lead for development of bifunctional mu/delta opioid receptor ligands.

description: Small molecule binding data for protein Kappa-type opioid receptor, Mu-type opioid receptor, Opioid receptors; mu/kappa/delta, and mu/kappa opioid receptor, Uniprot P35372, P41143, P41144, P41145, and P97266
DOI: 10.7270/q24m96px
title: BindingDB Entry 50048313: TBA

description: Small molecule binding data for protein Muscarinic acetylcholine receptor, Uniprot P08482, P08483, P08485, P08911, and P10980
DOI: 10.7270/q26m392f
title: BindingDB Entry 50049079: Synthesis and biological evaluation of novel hydroxybenzaldehyde-based kojic acid analogues as inhibitors of mushroom tyrosinase.

description: Small molecule binding data for protein Tyrosinase, Uniprot O42713
DOI: 10.7270/q28c9zd8
title: BindingDB Entry 50048312: TBA

description: Small molecule binding data for protein Dopamine receptor D2 and D3, Uniprot P19020
DOI: 10.7270/q2bc41sr
title: BindingDB Entry 50049078: Design and synthesis of novel 7-aminosubstituted pyrido[2,3-b]pyrazines exhibiting anti-breast cancer activity.

description: Small molecule binding data for protein Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform, Uniprot P42336
DOI: 10.7270/q2c53p05
title: BindingDB Entry 50048319: TBA

description: Small molecule binding data for protein Angiotensin II receptor (AT-1) type-1, Uniprot P25095 and P29089
DOI: 10.7270/q2g44sjj
title: BindingDB Entry 50049077: Design and Synthesis of a Series of l-trans-4-Substituted Prolines as Selective Antagonists for the Ionotropic Glutamate Receptors Including Functional and X-ray Crystallographic Studies of New Subtype Selective Kainic Acid Receptor Subtype 1 (GluK1) Antagonist (2S,4R)-4-(2-Carboxyphenoxy)pyrrolidin

description: Small molecule binding data for protein Excitatory amino acid transporter 1, Excitatory amino acid transporter 2, Excitatory amino acid transporter 3, Glutamate receptor ionotropic kainate, Glutamate receptor ionotropic, AMPA 2, Glutamate receptor ionotropic, kainate, and Ionotropic glutamate receptor kainate 2/5, Uniprot P19491, P22756, P39086, P42260, P42264, P43003, P43004, P43005, and Q13003
DOI: 10.7270/q2gx4dq5
title: BindingDB Entry 50048318: TBA

description: Small molecule binding data for protein Human immunodeficiency virus type 1 protease
DOI: 10.7270/q2kw5j9d
title: BindingDB Entry 50049076: Discovery of a Chemical Probe Bisamide (CCT251236): An Orally Bioavailable Efficacious Pirin Ligand from a Heat Shock Transcription Factor 1 (HSF1) Phenotypic Screen.

description: Small molecule binding data for protein Heat shock factor protein 1, Mast/stem cell growth factor receptor Kit, Pirin, Platelet-derived growth factor receptor, Platelet-derived growth factor receptor beta, and RAF serine/threonine protein kinase, Uniprot O00625, P09619, P10721, P15056, P16234, and Q00613
DOI: 10.7270/q2mp55fw
title: BindingDB Entry 50048317: TBA

description: Small molecule binding data for protein C5a anaphylatoxin chemotactic receptor (C5aR), Uniprot P21730
DOI: 10.7270/q2qn6914
title: BindingDB Entry 50049075: Identification and optimization of a novel series of indoleamine 2,3-dioxygenase inhibitors.

description: Small molecule binding data for protein Cytochrome P450 1A, Cytochrome P450 2B6, Cytochrome P450 2C19, Cytochrome P450 2C8, Cytochrome P450 2C9, Cytochrome P450 2D6, Cytochrome P450 3A, and Indoleamine 2,3-dioxygenase 1, Uniprot P05177, P08684, P10632, P10635, P11712, P14902, P20813, and P33261
DOI: 10.7270/q2rf5x57
title: BindingDB Entry 50048316: TBA

description: Small molecule binding data for protein Muscarinic acetylcholine receptor, Uniprot P08482, P08483, P08485, P08911, and P10980
DOI: 10.7270/q2tf00mm
title: BindingDB Entry 50049082: Discovery of triazole aminopyrazines as a highly potent and selective series of PI3Kd inhibitors.

description: Small molecule binding data for protein 5-hydroxytryptamine receptor 1A (5-HT1A), Casein kinase I isoform gamma-3, Dual-specificity tyrosine-phosphorylation regulated kinase 1A, Dual-specificity tyrosine-regulated kinases 1B, Endothelin-converting enzyme 1, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform, Phosphoinositide 3-Kinase (PI3K), delta, p110α/p85α, and p110β/p85α, Uniprot O00329, P08908, P27986, P42336, P42338, P42892, P48736, Q13627, Q9JHG7, Q9Y463, and Q9Y6M4
DOI: 10.7270/q2v98bb4
title: BindingDB Entry 50049074: Novel reversible methionine aminopeptidase-2 (MetAP-2) inhibitors based on purine and related bicyclic templates.

description: Small molecule binding data for protein Microtubule-associated protein 2, Uniprot P11137
DOI: 10.7270/q2w37zg7
title: BindingDB Entry 50048315: TBA

description: Small molecule binding data for protein Muscarinic acetylcholine receptor, Uniprot P08482, P08483, P08485, P08911, and P10980
DOI: 10.5281/zenodo.3575241
title: ribosomeprofiling/ribo_manuscript_supplemental: Supplementary material for the Ribo ecosystem manuscript

description: Supplementary material for the Manuscript RiboFlow, RiboR and RiboPy: An ecosystem for analyzing ribosome profiling data at read length resolution
DOI: 10.5281/zenodo.3575242
title: ribosomeprofiling/ribo_manuscript_supplemental: Supplementary material for the Ribo ecosystem manuscript

description: Supplementary material for the Manuscript RiboFlow, RiboR and RiboPy: An ecosystem for analyzing ribosome profiling data at read length resolution
DOI: 10.7270/q21v5h7s
title: BindingDB Entry 50049088: Optimization of spirocyclic proline tryptophan hydroxylase-1 inhibitors.

description: Small molecule binding data for protein Tryptophan 5-hydroxylase 2 and Tryptophan 5-hydroxylase_UNCURATED, Uniprot P17752 and Q8IWU9
DOI: 10.7270/q23n25hn
title: BindingDB Entry 50048321: TBA

description: Small molecule binding data for protein Leukotriene B4 receptor, Uniprot Q15722 and Q9NPC1
DOI: 10.7270/q25m67z3
title: BindingDB Entry 50049087: Synthesis and biological evaluation of naphthoquinone-coumarin conjugates as topoisomerase II inhibitors.

description: Small molecule binding data for protein DNA topoisomerase II, Uniprot P11388
DOI: 10.7270/q26d5w5h
title: BindingDB Entry 50048328: TBA

description: Small molecule binding data for protein Phosphodiesterase 3, Uniprot Q13370 and Q14432
DOI: 10.7270/q27d2x8f
title: BindingDB Entry 50048320: TBA

description: Small molecule binding data for protein 5-hydroxytryptamine receptor 1A, 5-hydroxytryptamine receptor 1B, and Serotonin 2 (5-HT2) receptor, Uniprot P08908, P28222, P28223, P28335, and P41595
DOI: 10.7270/q29c70pt
title: BindingDB Entry 50049086: Explicit treatment of active-site waters enhances quantum mechanical/implicit solvent scoring: Inhibition of CDK2 by new pyrazolo[1,5-a]pyrimidines.

description: Small molecule binding data for protein CDK2/CycE, Uniprot P24864 and P24941
DOI: 10.7270/q2b56mwt
title: BindingDB Entry 50048327: TBA

description: Small molecule binding data for protein Pancreatic lipase, Uniprot P16233
DOI: 10.7270/q2d50q6f
title: BindingDB Entry 50049093: Structure-based optimization of 1H-imidazole-2-carboxamides as Axl kinase inhibitors utilizing a Mer mutant surrogate.

description: Small molecule binding data for protein Tyrosine-protein kinase receptor UFO, Uniprot P30530
DOI: 10.7270/q2f47rd5
title: BindingDB Entry 50049085: A structure-guided optimization of pyrido[2,3-d]pyrimidin-7-ones as selective inhibitors of EGFR

description: Small molecule binding data for protein Epidermal growth factor receptor, Uniprot P00533
DOI: 10.7270/q2fx7cm7
title: BindingDB Entry 50048326: TBA

description: Small molecule binding data for protein DNA Gyrase, Uniprot P0AES4 and P0AES6
DOI: 10.7270/q2jw8h51
title: BindingDB Entry 50049084: Discovery of novel polycyclic spiro-fused carbocyclicoxindole-based anticancer agents.

description: Small molecule binding data for protein E3 ubiquitin-protein ligase Mdm2
DOI: 10.7270/q2kp84bz
title: BindingDB Entry 50048325: TBA

description: Small molecule binding data for protein Muscarinic acetylcholine receptor, Uniprot P08482, P08483, P08485, P08911, and P10980
DOI: 10.7270/q2pn97xs
title: BindingDB Entry 50049083: Sulfonamide inhibition profile of the¿-carbonic anhydrase identified in the genome of the pathogenic bacterium Burkholderia pseudomallei the etiological agent responsible of melioidosis.

description: Small molecule binding data for protein Carbonic anhydrase and Carbonic anhydrases; II & IX, Uniprot P00915 and P00918
DOI: 10.7270/q2qf8w29
title: BindingDB Entry 50048324: TBA

description: Small molecule binding data for protein Angiotensin II receptor, Uniprot P25095, P29089, and P35351
DOI: 10.7270/q2sf2zfd
title: BindingDB Entry 50049090: Synthetic strategy for increasing solubility of potential FLT3 inhibitor thieno[2,3-d]pyrimidine derivatives through structural modifications at the C

description: Small molecule binding data for protein Tyrosine-protein kinase receptor FLT3, Uniprot P36888
DOI: 10.7270/q2v69mr5
title: BindingDB Entry 50048323: TBA

description: Small molecule binding data for protein Leukocyte elastase, Uniprot P08246
DOI: 10.7270/q2x63q6k
title: BindingDB Entry 50049089: X-ray structure based evaluation of analogs of citalopram: Compounds with increased affinity and selectivity compared with R-citalopram for the allosteric site (S2) on hSERT.

description: Small molecule binding data for protein Monoamine transporters; serotonin & dopamine and Sodium-dependent serotonin transporter, Uniprot P31645 and P31652
DOI: 10.7270/q2z321w5
title: BindingDB Entry 50049081: An efficient anticoagulant candidate: Characterization, synthesis and in vivo study of a fondaparinux analogue Rrt1.17.

description: Small molecule binding data for protein Thrombin and coagulation factor X, Uniprot P00742
DOI: 10.7270/q2zw1p2t
title: BindingDB Entry 50048322: TBA

description: Small molecule binding data for protein Beta-lactamase, Beta-lactamase (TEM-1), Beta-lactamase BRO-1, Beta-lactamase type II, Class D β-lactamase (OXA-1), and SHV-1 beta-lactamase, Uniprot P00807, P05193, P05364, P0AD64, P13661, P25910, P62593, and Q83ZU9
DOI: 10.21227/3jc1-d485
title: Data for UGC

description: the data sets are based on the original survey data, and Mahalanobis distance and cook's distance have been utilized for the normal distribution, and some items have been reversed for analyses.
DOI: 10.21227/sexv-hn52
title: Data for UGC

description: the data sets are based on the original survey data, and Mahalanobis distance and cook's distance have been utilized for the normal distribution, and some items have been reversed for analyses.
DOI: 10.5281/zenodo.3575246
title: BCdatabaser - its2.viridiplantae.none.2019-12-13.zip

description: Parameters: --marker-search-string ITS2 --taxonomic-range Viridiplantae --sequence-length-filter 100:2000 --sequences-per-taxon 9
description: This dataset was automatically created with data from NCBI using the BCdatabaser tool
description: {"references": ["Keller et al. (2019) BCdatabaser: on-the-fly reference database creation for (meta-)barcoding. EcoEvoRxiv (2019); https://doi.org/10.32942/osf.io/cmfu2 - https://github.com/molbiodiv/bcdatabaser", "eutils: Sayers E. E-utilities Quick Start. 2008 Dec 12 [Updated 2018 Oct 24]. In: Entrez Programming Utilities Help [Internet]. Bethesda (MD): National Center for Biotechnology Information (US); 2010-. Available from: https://www.ncbi.nlm.nih.gov/books/NBK25500/", "NCBI::Taxonomy: F\u00f6rster et al. https://github.com/greatfireball/NCBI-Taxonomy - F\u00f6rster F. greatfireball/NCBI-Taxonomy v0.90. Zenodo. 2018 Oct 15; https://doi.org/10.5281/zenodo.1462861", "SeqFilter: Hackl et al. https://github.com/BioInf-Wuerzburg/SeqFilter", "dispr: Cofield et al. https://github.com/douglasgscofield/dispr", "Krona: Ondov BD, Bergman NH, and Phillippy AM. Interactive metagenomic visualization in a Web browser. BMC Bioinformatics. 2011 Sep 30; 12(1):385."]}
DOI: 10.5281/zenodo.3576038
title: BCdatabaser - trnl.magnoliophyta.sp_list.2019-12-14.zip

description: Parameters: --marker-search-string Trnl --taxonomic-range Magnoliophyta --sequence-length-filter 100:2000 --sequences-per-taxon 9
description: This dataset was automatically created with data from NCBI using the BCdatabaser tool
description: {"references": ["Keller et al. (2019) BCdatabaser: on-the-fly reference database creation for (meta-)barcoding. EcoEvoRxiv (2019); https://doi.org/10.32942/osf.io/cmfu2 - https://github.com/molbiodiv/bcdatabaser", "eutils: Sayers E. E-utilities Quick Start. 2008 Dec 12 [Updated 2018 Oct 24]. In: Entrez Programming Utilities Help [Internet]. Bethesda (MD): National Center for Biotechnology Information (US); 2010-. Available from: https://www.ncbi.nlm.nih.gov/books/NBK25500/", "NCBI::Taxonomy: F\u00f6rster et al. https://github.com/greatfireball/NCBI-Taxonomy - F\u00f6rster F. greatfireball/NCBI-Taxonomy v0.90. Zenodo. 2018 Oct 15; https://doi.org/10.5281/zenodo.1462861", "SeqFilter: Hackl et al. https://github.com/BioInf-Wuerzburg/SeqFilter", "dispr: Cofield et al. https://github.com/douglasgscofield/dispr", "Krona: Ondov BD, Bergman NH, and Phillippy AM. Interactive metagenomic visualization in a Web browser. BMC Bioinformatics. 2011 Sep 30; 12(1):385."]}