cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17357255
title: Integrated dataset on contaminant exposure, reproductive health, and environmental variables in the Baltic Sea (INSERT project)

description: This dataset was compiled within the INSERT project funded by the Swedish Environmental Protection Agency (SEPA) to support the integration of chemical and biological effect indicators under the Marine Strategy Framework Directive (MSFD), Descriptor 8. It includes experimental and field data used to explore the relationships between chemical pressures, environmental variability, and reproductive health indicators in benthic and pelagic organisms.

The dataset integrates:





Field data on reproductive aberrations in Monoporeia affinis (ReproIND components), sediment contaminant concentrations (PAHs, metals, PCBs, etc.), and key abiotic parameters (temperature, salinity, oxygen, TOC, and depth) across multiple Baltic Sea basins (Bothnian Bay, Bothnian Sea, Western Gotland Basin, Gulfs of Finland and Riga).




Experimental data on dose–response relationships in Daphnia magna, Chironomus riparius, and Lumbriculus variegatus exposed to PAH mixtures under varying temperature, nutritional, and metal co-exposure conditions, using chemical activity as the exposure metric.




Derived indices, including:





Chemical activity values for PAHs (calculated with Gobas et al. 2018 model parameters)




Pollution Load Index (PLI) for trace metals




ReproIND indicator values for reproductive aberrations






Environmental and geospatial metadata, extracted from ICES DOME and SHARKweb repositories.



The combined dataset underpins statistical and machine learning analyses (GLM, PLS-SEM, Decision Trees) used to identify association rules and thresholds for Good Environmental Status (GES) refinement.
DOI: 10.5281/zenodo.17357254
title: Integrated dataset on contaminant exposure, reproductive health, and environmental variables in the Baltic Sea (INSERT project)

description: This dataset was compiled within the INSERT project funded by the Swedish Environmental Protection Agency (SEPA) to support the integration of chemical and biological effect indicators under the Marine Strategy Framework Directive (MSFD), Descriptor 8. It includes experimental and field data used to explore the relationships between chemical pressures, environmental variability, and reproductive health indicators in benthic and pelagic organisms.

The dataset integrates:





Field data on reproductive aberrations in Monoporeia affinis (ReproIND components), sediment contaminant concentrations (PAHs, metals, PCBs, etc.), and key abiotic parameters (temperature, salinity, oxygen, TOC, and depth) across multiple Baltic Sea basins (Bothnian Bay, Bothnian Sea, Western Gotland Basin, Gulfs of Finland and Riga).




Experimental data on dose–response relationships in Daphnia magna, Chironomus riparius, and Lumbriculus variegatus exposed to PAH mixtures under varying temperature, nutritional, and metal co-exposure conditions, using chemical activity as the exposure metric.




Derived indices, including:





Chemical activity values for PAHs (calculated with Gobas et al. 2018 model parameters)




Pollution Load Index (PLI) for trace metals




ReproIND indicator values for reproductive aberrations






Environmental and geospatial metadata, extracted from ICES DOME and SHARKweb repositories.



The combined dataset underpins statistical and machine learning analyses (GLM, PLS-SEM, Decision Trees) used to identify association rules and thresholds for Good Environmental Status (GES) refinement.
DOI: 10.15468/dl.gcerye
title: Occurrence Download

description: A dataset containing 135 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Caluromys philander)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 135 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003443-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.76ka7z
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Caluromys philander)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003442-250802193616735/datasets/export for details.
DOI: 10.15468/dl.h82ujv
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Indigofera suffruticosa",
 "Country is Thailand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003445-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z84w7m
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Apogon bleekeri"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003446-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kdzggh
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chiloglanis kolente)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003448-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rnt7ma
title: Occurrence Download

description: A dataset containing 403 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fejervarya kawamurai",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 403 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003449-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5c4jjn
title: Occurrence Download

description: A dataset containing 578 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cercocarpus macrophyllus)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 578 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003447-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ax5v9
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Indigofera suffruticosa",
 "Country is Timor-Leste",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003451-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.esvxc5
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Adiantum raddianum",
 "Country is Sri Lanka",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003452-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r9v6vt
title: Occurrence Download

description: A dataset containing 21561 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Pelodytes",
 "Year 2010-2025"
 ]
}

 The dataset includes 21561 records from 706 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003450-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6uxs9z
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Caluromys philander)",
 "Country is one of (Algeria, Angola, Benin, Botswana, British Indian Ocean Territory, Burkina Faso, Burundi, Cabo Verde, Cameroon, Central African Republic, Chad, Comoros, Congo, Congo, Democratic Republic of the, Côte d’Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Eswatini, Ethiopia, French Southern Territories, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Ascension and Tristan da Cunha, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, South Sudan, Sudan, Tanzania, United Republic of, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003455-250802193616735/datasets/export for details.
DOI: 10.15468/dl.k3wxpx
title: Occurrence Download

description: A dataset containing 216 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Chionanthus retusus",
 "Year 1960-2025"
 ]
}

 The dataset includes 216 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003453-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rtepfk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Caluromys philander)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003454-250802193616735/datasets/export for details.
DOI: 10.15468/dl.9ptgtu
title: Occurrence Download

description: A dataset containing 13372 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gavicalis versicolor)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 13372 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003456-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vhm66v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Caluromys philander)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003457-250802193616735/datasets/export for details.
DOI: 10.15468/dl.j7hpj2
title: Occurrence Download

description: A dataset containing 174555 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Raphanus raphanistrum"
 ]
}

 The dataset includes 174555 records from 1524 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003359-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id243575.1
title: StrainInfo SI-ID 243575.1

description: StrainInfo dataset 243575 about a strain of Pleurotus ostreatus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243657.1
title: StrainInfo SI-ID 243657.1

description: StrainInfo dataset 243657 about a strain of Uncinocarpus orissi. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243658.1
title: StrainInfo SI-ID 243658.1

description: StrainInfo dataset 243658 about a strain of Uncinocarpus orissi. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243659.1
title: StrainInfo SI-ID 243659.1

description: StrainInfo dataset 243659 about a strain of Chrysosporium lobatum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243501.1
title: StrainInfo SI-ID 243501.1

description: StrainInfo dataset 243501 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243502.1
title: StrainInfo SI-ID 243502.1

description: StrainInfo dataset 243502 about a strain of Uncinocarpus reesii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243503.1
title: StrainInfo SI-ID 243503.1

description: StrainInfo dataset 243503 about a strain of Suillus umbonatus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243504.1
title: StrainInfo SI-ID 243504.1

description: StrainInfo dataset 243504 about a strain of Suillus umbonatus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243576.1
title: StrainInfo SI-ID 243576.1

description: StrainInfo dataset 243576 about a strain of Pleurotus ostreatus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243577.1
title: StrainInfo SI-ID 243577.1

description: StrainInfo dataset 243577 about a strain of Pleurotus ostreatus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243578.1
title: StrainInfo SI-ID 243578.1

description: StrainInfo dataset 243578 about a strain of Pleurotus ostreatus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243660.1
title: StrainInfo SI-ID 243660.1

description: StrainInfo dataset 243660 about a strain of Lichtheimia corymbifera. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243661.1
title: StrainInfo SI-ID 243661.1

description: StrainInfo dataset 243661 about a strain of Rasamsonia argillacea. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243662.1
title: StrainInfo SI-ID 243662.1

description: StrainInfo dataset 243662 about a strain of Golubevia pallescens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243663.1
title: StrainInfo SI-ID 243663.1

description: StrainInfo dataset 243663 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243505.1
title: StrainInfo SI-ID 243505.1

description: StrainInfo dataset 243505 about a strain of Suillus umbonatus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243506.1
title: StrainInfo SI-ID 243506.1

description: StrainInfo dataset 243506 about a strain of Tricholoma pessundatum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243507.1
title: StrainInfo SI-ID 243507.1

description: StrainInfo dataset 243507 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243579.1
title: StrainInfo SI-ID 243579.1

description: StrainInfo dataset 243579 about a strain of Pleurotus ostreatus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243580.1
title: StrainInfo SI-ID 243580.1

description: StrainInfo dataset 243580 about a strain of Pleurotus pulmonarius. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243581.1
title: StrainInfo SI-ID 243581.1

description: StrainInfo dataset 243581 about a strain of Pleurotus ostreatus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243664.1
title: StrainInfo SI-ID 243664.1

description: StrainInfo dataset 243664 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id243665.1
title: StrainInfo SI-ID 243665.1

description: StrainInfo dataset 243665 about a strain of Sistotrema brinkmannii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.