cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.14457/cu.the.2009.2082
title: Purification and characterization lectin from the rhizome of kaempferia parviflora wall. ex. baker

description: A lectin was isolated from the rhizomes of black galingale (Kra Chai Dam), Kaempferia parviflora Wall. Ex. Baker, using, in sequential order, ammonium sulfate precipitation, Concanavalin A affinity chromatography and Sephacryl S-100 gel filtration chromatography. The molecular weight of the purified lectin (or monomeric subunit) was estimated to be about 41.7 kDa by reducing SDS-PAGE analysis. The lectin showed hemagglutinating activity against, in order of the strongest activity, rabbit &gt;&gt; sheep &gt; goose = rat &gt; mouse = guinea pig = human O group &gt; human A = B = AB group erythrocytes. In terms of hemagglutination activity, the optimal pH range of the K. parviflora lectin was between pH 6 - 8 and it was active up to 75℃. Furthermore, the purified K. parviflora rhizome lectin preparation at 18 - 36 µg /0.3 square cm disc was able to inhibit the growth of the plant pathogenic fungi, Exserohilum turcicum, Fusarium oxysporum and colectrotrichum cassicola, on potato dextrose agar (PDA) plates, and showed potentially non-selective antibacterial activity since it inhibited the growth of both gram positive (Bacillus subtilis and Staphylococcus aureus) and gram negative (Pseudomonas aeruginosa) bacteria with a minimum inhibitory concentration (MIC) of 0.184, 1.270 and 1.270 mg/ml, respectively. Finally, this purified lectin also exhibited a strong alpha-glucosidase inhibitory activity, but with a relatively high IC[subscript 50] value of 0.04 µg/ml.
DOI: 10.14457/cu.the.2009.2083
title: Estimating freight origin destination matrices using combined commodity flow survey and roadside survey data

description: The paucity of available data was limiting studies of freight flow in Thailand. To overcome this problem, commodity flow survey (CFS) and comprehensive freight transportation by truck using roadside survey (RS) were launched to collect comprehensive freight flow data throughout the kingdom of Thailand. Since these two surveys were pioneering and due to budgetary limitations, the resulting data are still incomplete and must be adjusted. The need to produce a freight origin destination matrix using available data from CFS and RS led to the objectives of this research. This research has two main objectives. The first is to develop a methodology for combining CFS and RS. The second is to develop a method for filling gaps in the origin destination matrix based on the Adaptive Neuro Fuzzy Inference System (ANFIS) approach. The methodology to combine these two data sources was developed which uses the strengths of each method, the CFS distribution pattern and the RS marginal total. The first method is Trip Length Distribution Adjusting (TLDA), which uses adjustments to CFS trip length distribution to meet RS marginal total. The second method is Gravity Model Approach (GMA), which uses CFS friction functions to adjust RS data matrix. The method was calibrated using two difference sources of roadside survey. The results indicated that the adjusted volumes of the two data sources agreed despite being collected at different times and by different authors, and that the differences between the total adjusted volumes were quite small. It can therefore be concluded that the developed method can be used to adjust the data. For the second component, a model using BOX-COX transformation and Adaptive Neuro Fuzzy Inference system (ANFIS) was developed and verified against a convention gravity model. Two types of model, using convention gravity variables and using socio-economic variables, were developed. The results showed that the ANFIS model outperformed both the conventional gravity model and the BOX-COX model. These results proved the performance of the adaptive neuro fuzzy inference system for modeling complex system and its ability to model freight trip distribution.
DOI: 10.17632/c2s3m84kt8.1
title: Isothermal Drying Characteristics and Kinetics of Human Faecal Sludges

description: This study investigated the drying characteristics and kinetics of various faecal wastes -anaerobic baffled reactor (ABR), ventilated improved pit latrines (VIP), urine diversion dry toilets (UDDT) and fresh human faeces (HF) using thermogravimetric analysis under isothermal heating conditions (55-205oC).
DOI: 10.5281/zenodo.3459233
title: Mechanisms and drivers of belemnite body-size dynamics across the Pliensbachian-Toarcian crisis

description: Supplementary material of the manuscript Rita et al., <em>Mechanisms and drivers of belemnite body-size dynamics across the Pliensbachian-Toarcian </em><em>crisis</em>, submited to Open Science Royal Society. Set of .ply files of CT scans of belemnite rostra. The first 27 files correspond to bed P925; the next 5 files correspond to P949; the next 18 correspond to P961; the next 5 correspond to P976; the next 38 specimens correspond to bed P982 and the last 35 files correspond to bed P984. The number of each file is the specimen number, as listed in the supplementary material of the article. For details on the scanning details or on the age of the specimens, please see the supplementary material of the article. The supplementary figures ("supplementary figures_ESM8.docx" file) and tables ("supplementary tables.xlsx" file) and the R script used for the statistical analysis ("supplement_rscript.docx" file) are also provided. For more details contact patricia.rita@fau.de.
DOI: 10.17632/ddshhpn2k6.1
title: Data for: Efficiency assessment of Iran's petroleum refining industry in the presence of unprofitable output: a dynamic two-stage slacks-based measure

description: Petroleum refineries inputs and outputs data in Iran 2011-2015. Available from: http://www.niordc.ir/index.aspx?fkeyid=&siteid=78&pageid=1787
DOI: 10.17632/3239952w8c.1
title: Minerals in human-190923

description: Circulating concentrations of six minerals, glucose, and lipids were determined in 1466 adult Chinese of both sexes recruited from a health examination center with certain criteria.
DOI: 10.17632/gzj9p6kmtd.1
title: Data for: Sustainable Mobility amongst the older population: insights from a UK nationwide survey
DOI: 10.17632/nbjmv2pk25.1
title: Data for: Spatial spillover effects and risk contagion around G20 stock markets based on volatility network
DOI: 10.6073/pasta/bf6caddba088fb97b2ae774d8fb2a3d4
title: CSM02 Seasonal summary of numbers of small mammals on the four LTER gallery forest and limestone ledges traplines in wooded habitats at Konza Prairie

description: Data set contains seasonal summaries (spring, summer and autumn) of the number of individuals of each species of small mammal captured (relative abundance) on each woodland trapline. Each record contains year, season, trapline and number of individuals captured of each species. These live trap records are based on daily captures during a single 4-day trapping period in spring (early March to early April), summer (early July to late July) and autumn (mid-October to early December) for each of four permanent traplines established in two habitats (two traplines in gallery forest and two on limestone ledges). Bison did not graze any of the treatment units during the period of study.
DOI: 10.15151/esrf-es-187035511
title: Structure of the HIV-1 envelope protein in complex with the broadly neutralizing antibodies PGT128 and LN02
DOI: 10.17632/698gcrrb2z.2
title: Data: Major lineages of Loasaceae subfam. Loasoideae diversified during the Andean uplift

description: Research data: Concatenated alignment used to infer the divergence times and biogeographic history of Loasoideae and maximum clade credibility trees of Cornales in .tre format for callibration schemes A, B and C. Refer to the main article: Acuña, Luebert, Henning & Weigend. Major lineages of Loasaceae subfam. Loasoideae diversified during the Andean uplift. Molecular Phylogenetics and Evolution, for details.
DOI: 10.17632/m4ksvmrpsx.1
title: Comment on “Computer simulation of Fresnel diffraction from rectangular apertures and obstacles using the Fresnel integrals approach” in Optics & Laser technology, January 2020

description: This is the Mathematica notebook use for the simulations reported in the comment.
DOI: 10.17632/m6hhst4gfs.1
title: Data for: An optimization of tear extraction method: a simple tool for screening and diagnosis in the medicine of the future

description: Methodology files and statistical results
DOI: 10.17632/stxrv6x98g.3
title: NPGPx-mediated adaptation to oxidative stress protects motor neuron from degeneration in aging by directly modulating O-GlcNAcase

description: Tiff files for Western blots
DOI: 10.25345/c58q1m
title: MassIVE MSV000084371 - Interactome analyses of LIN28A in human induced pluripotent stem cell-derived neural progenitor cells
title: LIN28A is a multi-functional protein that governs developmental timing, cell fate determination, stem cell pluripotency, cellular growth, and metabolism. Aberrant regulation of LIN28A can cause disorders such as developmental defects and malignant cancers. LIN28A is known as an RNA-binding protein involved in microRNA biogenesis, mRNA translation and splicing, so RNA targets of LIN28A have been extensively analyzed; however, protein complexes associated with LIN28A have not been comprehensively studied. To more thoroughly understand the molecular mechanisms of LIN28A in neural development, we profiled the endogenous LIN28A-interacting proteins using immunoprecipitation and liquid chromatography-tandem mass spectrometry in human iPS cell-derived neural progenitor cells. We performed immunoprecipitations in triplicate using the antibody specific to endogenous LIN28A (woRN) and analyzed the eluates by on LC-MS/MS. We also analyzed the samples with RNase A treatment (wRN) to identify the interactions that are independent of RNA. We compared these samples with IgG controls (control) using the software tool Significance Analysis of INTeractome (SAINT), and thereby we identified 447 proteins/protein groups with FDR &lt; 0.05 in woRN and including 149 in wRN.
DOI: 10.6073/pasta/258e398ad4e155dd0857d5bedab86323
title: CSM03 Seasonal summary of numbers of small mammals on the two LTER traplines in planted grassland (Brome fields) habitats at Konza Prairie

description: Data set contains seasonal summaries (spring, summer and autumn) of the number of individuals of each species of small mammal captured (relative abundance) on each woodland trapline. Each record contains year, season, trapline and number of individuals captured of each species. These live trap records are based on daily captures during a single 4-day trapping period in spring (early March to early April), summer (early July to late July) and autumn (mid-October to early December) for each of four permanent traplines established in two habitats (two traplines in gallery forest and two on limestone ledges). Bison did not graze any of the treatment units during the period of study.
DOI: 10.6073/pasta/5db599009d5c1652e62b1b51b08429c5
title: CSM04 Seasonal summary of numbers of small mammals on the eight LTER seasonal burn traplines in prairie habitats at Konza Prairie

description: Data set contains seasonal summaries (spring, summer and fall) of the number of individuals of each species of small mammal caught (relative density) on each grassland census line. Each record contains trapline, year of last fire and number of individuals per species. These live trap records are based on daily captures during three 4-day trapping peroids, March, July and October, for each of 20 permanent census lines established on 10 fire-grazing treatments (2 lines per treatment). These 10 fire-grazing treatments are one unburned, one annual burn and one 4- year burn site to be grazed by native ungulates and one unburned, one annual burn, four 4-year burn and one 10-year burn site not grazed by ungulates.
DOI: 10.17632/4fjmf8kw9h.1
title: hypocalcemia

description: research
DOI: 10.17632/c59n55cxzs.1
title: Data for: Mock meat in the butchery: Nudging consumers toward meat substitutes

description: Data for Study 2
DOI: 10.17632/fnygx9wdn4.3
title: Soil analysis data for forest islands dispersed on savannas of Roraima, northern Brazilian Amazonia

description: The dataset provides information on soil texture and fertility for twelve forest islands (or forest fragments) dispersed on savannas of Roraima, northern Brazilian Amazonia. The sampled forest islands are representations of semideciduous seasonal forests with paleoclimatic origin naturally dispersed over a landscape with low altitude (~90 m a.s.l.). They are situated in a forest–savanna ecotone and have been exposed to frequent anthropogenic impact as selective logging and understory forest fire. The fieldwork was carried out between 2013-2014, when were taken soil cores from a profile to 100 cm depth, divided into six intervals (0–10, 10–20, 20–30, 30–40, 40–50, and 90–100 cm). The samples were arranged equidistantly along transects to represent the variability in texture and soil fertility between the edges and the interior (gradient of position) of each fragment (see details in Turcios et al. 2016. Soil charcoal as long-term pyrogenic carbon storage in Amazonian seasonal forests. Global Change Biology, 22: 190–197). The dataset is presented in three files: (i) study_site - a figure indicating location of the study area, (ii) soil_analysis_with gradient – a file with the identification of each sampling unit (forest island), geographical location (lat / long - WGS84), and information on texture (% - sand, silt, clay) and soil fertility (chemical variables) associated to gradient of position (edge and interior), and signs of presence-absence (yes or no) of cattle, understory fire and selective logging, (iii) soil_analysis_without gradient – a file with the identification of each sampling unit (forest island), geographical location (lat / long - WGS84), and information on texture (% - sand, silt, clay) and soil fertility (chemical variables) associated to signs of presence-absence (yes or no) of cattle, understory fire and selective logging. The last one represents weighted means (between edge and interior) for each forest island to be used as reference in the ForestPlots.net data. This dataset was supported by the ‘Ecology and Management of Natural Resources of the Roraima Savanna’ project (PPI-INPA 015/122) and the National Council for Scientific and Technological Development of Brazil (CNPq 303081/2011-2), under a fellowship for R.I. Barbosa. M. M. Turcios and M. M. A. Jaramillo were supported by postgraduate fellowships from the Organization of American States (OAS), while L.C.S. Carvalho was supported by a fellowship from Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES/PNPD).
DOI: 10.17632/t654gx7z74.2
title: Estimating fish density and detectability by unbaited vertical underwater-camera device

description: Data from underwater video cameras and underwater visual census to obtain real fish densities considering the habitat characteristics in the individual detectability.
DOI: 10.6073/pasta/8166f11287117b284e120e0a35e31e45
title: CSM06 Seasonal summary of numbers of small mammals on miscellaneous traplines in prairie habitats that were trapped from 1 to 11 years at Konza Prairie

description: Data set contains seasonal summaries (spring, summer and autumn) of the number of individuals of each species of small mammal captured (relative abundance) on each prairie trapline. Each record contains year, season, trapline and number of individuals captured of each species. These live trap records are based on daily captures during 4-day trapping periods in spring (early March to early April), summer (late June to late July) and autumn (early October to mid-November) for each permanent trapline (two traplines per treatment). These treatments include annual burns, 2-year burns, 4-year burns and 10-year burns; none were grazed by bison. This data set includes 14 traplines sampled in autumn and spring and 30 traplines in summer.
DOI: 10.17632/9jmd62vny2.1
title: Visual detection of time-varying signals: opposing biases and their timescales - Database

description: The background and description of the research hypothesis and results can be read in the article itself. Data structure description: Raw data of all subjects that participated in any part of the experiments related to the article. Each folder (folder name is composed of subjects initials, gender and age) contains few sub folders: TC 1 and TC 2 are the baseline measurements taken before and after experiment. White_1, Pink_1 and Brown_1 relay to the protocol of inputs presentation, (in several subjects there is Black_1 which was excluded in an early stage of research and not further analyzed). in each sub-folder there are the files vlevel.txt are the levels of inputs and response.txt marking subjects responses . stim.txt is to be ignored, it's always 1 in this research.
DOI: 10.17632/dchrcdhznr.1
title: BMP assays

description: This dataset contains the results of BMP assays were physically pre-treated slaughterhouse wastewater was used as substrate under five different substrate / inoculum ratio. RSWW archive corresponds to experiments with raw slaughterhouse wastewater; meanwhile S and SM archives corresponds to semi-solid and semi-solid after mechanical pre-treatment, respectively. This information was employed to evaluate the Luedeking-Piret model.
DOI: 10.17632/zstbdddgv8.1
title: dataset for Diversity and seasonality of horse flies (Diptera: Tabanidae) in Uruguay

description: For 20 months, systematic collections were performed using Nzi and Malaise traps in two different environments at the experimental farm. Temperature, humidity and rainfall were recorded using a local climatological station. In addition, nonsystematic collections were made at farms located in the departments of Paysandú, Tacuarembó and Colonia. A total of 3,666 horse flies were collected, allowing the identification of 16 species. Three species were recorded for the first time in Uruguay: Dasybasis ornatissima (Brèthes), Dasybasis missionum (Macquart), and Tabanus aff. platensis Brèthes. A species that had not been previously taxonomically described was identified (Tabanus sp.1). In the systematic captures, the most abundant species were Tabanus campestris Brèthes, T. aff. platensis and D. missionum, representing 77.6% of the collected specimens. Variations in the prevalence of species in the different departments were observed
DOI: 10.17632/g4z349xrw2.1
title: Data for: The Road to Innovation V.S. the Role of Globalization: A Dynamic Quantile Investigation
DOI: 10.17632/h5bfvmcjz2.1
title: Data for: The macroalgal ensemble of Golfo Nuevo (Patagonia, Argentina) as a potential source of valuable fatty acids for nutritional and nutraceutical purposes

description: The appendix contains the fatty acid profile of fifteen seaweed species from Patagonia. Sixty nine different fatty acids were detected; most of them at trace levels and/or in specific samples only. Five were branched-chain FA with 11-14 carbon chain length and another three were hydroxylated FA with 16-22 carbon chain length. Thirteen of the detected compounds were identified to their chain length and number of double bonds, but could not be determined the double bonds position. Five of the detected compounds were only identified to their chain length. One compound could not be identified in chain length, number and position of double bonds. One of the hydroxylated FA could not be identified in the OH and double bond position. In all cases, cis or trans isomers were confirmed only if the compounds were present in the standards used. For further analysis, a database with 31 FA was constructed by filtering from the raw database those FA whose proportion exceeded 2% in, at least, one sample. This procedure excluded 65% of the detected compounds from the analysis, but its content only accounted for 2.3% of the total FA.
DOI: 10.17632/ynngsv6dzr.1
title: Data for: The Road to Innovation V.S. the Role of Globalization: A Dynamic Quantile Investigation

description: Globalization; Innovation
DOI: 10.17632/zsh5hkdjhh.1
title: Restorative Effects of Biophilic Indoor Environment: A Between-subjects Experiment in Virtual Reality

description: In this study, we hypothesize that exposure to biophilic indoor environments help people recover from stress and anxiety and those effects differ among different types of biophilic elements. To test this hypothesize, we conducted a between-subjects experiment using virtual reality, recruited 100 health adult participants via the Harvard Decision Science Lab recruitment system (SONA, n=3619) from October to December in 2018. Participants were randomly assigned to experience one of four virtual offices (i.e. one non- biophilic base office and three similar offices enhanced with different biophilic design elements) after stressor tasks. Their physiological indicators of stress reaction, including heart rate variability, heart rate, skin conductance level and blood pressure, were measured by bio-monitoring sensors. Their anxiety level was measured using State-Trait Anxiety Inventory test (short version). This research was done by researchers from Environment Health Department in Harvard T.H.Chan School of Public Health, and supported by the Campus Sustainability Innovation Fund, administered by Harvard Office for Sustainability.
DOI: 10.6073/pasta/89846e133f48edf3de8fc96e69cf1204
title: CSM05 Seasonal summary of numbers of small mammals on the six LTER traplines in prairie habitats on which fire regime has been reversed at Konza Prairie

description: Data set contains seasonal summaries (spring and autumn) of the number of individuals of each species of small mammal captured (relative abundance) on each grassland trapline. Each record contains year, season, trapline and number of individuals captured of each species. These live trap records are based on daily captures during a single 4-day trapping period in spring (mid-March to early April) and autumn (late October to early December) for each of six permanent traplines established on two fire treatments (three traplines per treatment). These two fire treatments include one treatment that was changed from a 20-year burn to an annual burn and one that was changed from an annual burn to 20 years between fires. Bison do not graze these two habitat types.
DOI: 10.17632/k5vbbrvfm9.1
title: SIMULATOR SICKNESS QUESTIONNAIRE DATASET 2017 VR HORROR GAMES
DOI: 10.17632/mxgkstdr8f.1
title: Python Script for "On the Automatic Parameter Selection for Permutation Entropy"

description: This repository has all the script needed to recreate the results found in "On the Automatic Parameter Selection for Permutation Entropy." Specifically, automatic functions for calculating the permutation entropy parameters of delay and dimension are provided.
DOI: 10.17632/mxgkstdr8f.2
title: Python Script for the Automatic Parameter Selection of Permutation Entropy

description: This repository has all the script needed to recreate the results found in "On the Automatic Parameter Selection for Permutation Entropy." Specifically, automatic functions for calculating the permutation entropy parameters of delay and dimension are provided.
DOI: 10.17632/zf9mjpxkvy.1
title: Video Swirling Fluidized Bed Reactor

description: A swirling fluidized bed reactor design for the preparation of supported nanoparticles is reported. It uses a DC plasma torch that decomposes and vaporizes salt precursors; the cationic part condenses as metal nanoparticles on a powder support. Any fluidizable granular material can be used as support, as long as it withstands the temperatures of the plasma torch. The torch is located at the center of the reactor axis and the powder is fluidized using a cyclonic action (swirl) to minimize the space where the grains could come into direct contact with the plasma zone. The reactor was tested for the production of silver nanoparticles (AgNPs) supported on silica-alumina, using silver nitrate as precursor.