cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc1n1fy2
title: CCDC 1520734: Experimental Crystal Structure Determination

description: Related Article: Maosong Qiu, Jing Jin, Lian Zhou, Wen Zhou, Yinxiang Liu, Qinglong Tan, Di Cao, Zhongxiang Zhao|2018|Phytochemistry|145|103|doi:10.1016/j.phytochem.2017.10.008
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1n1fz3
title: CCDC 1520735: Experimental Crystal Structure Determination

description: Related Article: Maosong Qiu, Jing Jin, Lian Zhou, Wen Zhou, Yinxiang Liu, Qinglong Tan, Di Cao, Zhongxiang Zhao|2018|Phytochemistry|145|103|doi:10.1016/j.phytochem.2017.10.008
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.bdcbwf
title: Occurrence Download

description: A dataset containing 1901 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((87.73468 14.04193,158.51542 14.04193,158.51542 57.05852,87.73468 57.05852,87.73468 14.04193))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ludwigia epilobioides"
 ]
}

 The dataset includes 1901 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054394-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc1n1g05
title: CCDC 1520736: Experimental Crystal Structure Determination

description: Related Article: Ben-Xian Xiao, Wei Du, and Ying-Chun Chen|2017|Adv.Synth.Catal.|359|1018|doi:10.1002/adsc.201601207
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1n1gdk
title: CCDC 1520748: Experimental Crystal Structure Determination

description: Related Article: Amit N. Pandya, Eric M. Villa, E. Jeffrey North|2017|Tetrahedron Lett.|58|1276|doi:10.1016/j.tetlet.2017.02.033
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1n1g27
title: CCDC 1520738: Experimental Crystal Structure Determination

description: Related Article: Jasimuddin Ahmed, Sreejyothi P, Gonela Vijaykumar, Anex Jose, Manthan Raj, Swadhin K. Mandal|2017|Chemical Science|8|7798|doi:10.1039/C7SC02661G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1lvl12
title: CCDC 1485304: Experimental Crystal Structure Determination

description: Related Article: P. Naveen, S. Naveen, Zabiulla, S.B. Benaka Prasad, N.K. Lokanath, S.A. Khanum, I. Warad|2016|IUCrData|1|x161934|doi:10.1107/S2414314616019349
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1n1g38
title: CCDC 1520739: Experimental Crystal Structure Determination

description: Related Article: Zahra Asadi, Maryam Golchin, Vaclav Eigner, Michal Dusek, Zahra Amirghofran|2017|Inorg.Chim.Acta|465|50|doi:10.1016/j.ica.2017.05.066
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc1y41y2
title: CSD 1791364: Experimental Crystal Structure Determination

description: Related Article: Franziska Baumer, Yuqiang Ma, Chenfei Shen, Anyi Zhang, Liang Chen, Yihang Liu, Daniela Pfister, Tom Nilges, Chongwu Zhou|2017|ACS Nano|11|4105|doi:10.1021/acsnano.7b00798
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1n1g49
title: CCDC 1520740: Experimental Crystal Structure Determination

description: Related Article: V.M. Sunitha, S. Naveen, A. Dileep Kumar, K. Ajay Kumar, N.K. Lokanath, V. Manivannan, H.R. Manjunath|2016|IUCrData|1|x161935|doi:10.1107/S2414314616019350
description: Related Article: D. Ramyashree, K.R. Raghavendra, A. Dileep Kumar, C.B. Vagish, K. Ajay Kumar|2017|Asian J.Chem.|29|1538|doi:10.14233/ajchem.2017.20561
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1n1g5b
title: CCDC 1520741: Experimental Crystal Structure Determination

description: Related Article: A. Nimthong-Roldán, N. Promsuwhan, W. Puetpaiboon, Y. Wattanakanjana|2017|Acta Crystallogr.,Sect.E:Cryst.Commun.|73|41|doi:10.1107/S2056989016019368
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mzr8m
title: CCDC 1519101: Experimental Crystal Structure Determination

description: Related Article: Claus Hierlinger, Thierry Roisnel, David B. Cordes, Alexandra M. Z. Slawin, Denis Jacquemin, Véronique Guerchais, and Eli Zysman-Colman|2017|Inorg.Chem.|56|5182|doi:10.1021/acs.inorgchem.7b00328
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mzr9n
title: CCDC 1519102: Experimental Crystal Structure Determination

description: Related Article: Claus Hierlinger, Thierry Roisnel, David B. Cordes, Alexandra M. Z. Slawin, Denis Jacquemin, Véronique Guerchais, and Eli Zysman-Colman|2017|Inorg.Chem.|56|5182|doi:10.1021/acs.inorgchem.7b00328
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1mzrbp
title: CCDC 1519103: Experimental Crystal Structure Determination

description: Related Article: Claus Hierlinger, Thierry Roisnel, David B. Cordes, Alexandra M. Z. Slawin, Denis Jacquemin, Véronique Guerchais, and Eli Zysman-Colman|2017|Inorg.Chem.|56|5182|doi:10.1021/acs.inorgchem.7b00328
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.mf9hnw
title: Occurrence Download

description: A dataset containing 19141 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-14.44818 29.57573,22.43862 29.57573,22.43862 63.89829,-14.44818 63.89829,-14.44818 29.57573))",
 "TaxonKey is one of (Ostrea edulis Linnaeus, 1758, Crassostrea gigas (Thunberg, 1793))"
 ]
}

 The dataset includes 19141 records from 186 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015063-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.98hkvk
title: Occurrence Download

description: A dataset containing 944 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lepidorhombus whiffiagonis (Walbaum, 1792)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 944 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015065-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z936aa
title: Occurrence Download

description: A dataset containing 168728 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Lychnis flos-cuculi L.)"
 ]
}

 The dataset includes 168728 records from 1371 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015051-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14251446
title: Multi-Omic Single-Cell Dissection of Leukemic T-Cell Lymphoma Following CAR T-Cell Therapy

description: This repository contains code used to produce the results in: Till Braun, Michael Rade and Maximilian Merz et al., Multi-Omic Single-Cell Dissection of Leukemic T-Cell Lymphoma Following CAR T-Cell Therapy

Contents:- Instructions for using the singularity image and R packages can be found here: https://github.com/fraunhofer-izi/Braun_et_al_2024/tree/main/singularity- "seurat_harmony.Rds" and "seurat_harmony_t.Rds": These Seurat objects were used to produce Figure 2 in this publication. "seurat_tcell_obj.Rds" is  a subset of "seurat_harmony.Rds" and contains only T-cells. In addition, the metadata was extended by the output of TCR-Seq (using the R package scRepertoire). The following script uses the objects: https://github.com/fraunhofer-izi/Braun_et_al_2024/blob/main/publication/figure_scripts/main/fig_02.R
DOI: 10.5281/zenodo.14251447
title: Multi-Omic Single-Cell Dissection of Leukemic T-Cell Lymphoma Following CAR T-Cell Therapy

description: This repository contains code used to produce the results in: Till Braun, Michael Rade and Maximilian Merz et al., Multi-Omic Single-Cell Dissection of Leukemic T-Cell Lymphoma Following CAR T-Cell Therapy

Contents:- Instructions for using the singularity image and R packages can be found here: https://github.com/fraunhofer-izi/Braun_et_al_2024/tree/main/singularity- "seurat_harmony.Rds" and "seurat_harmony_t.Rds": These Seurat objects were used to produce Figure 2 in this publication. "seurat_tcell_obj.Rds" is  a subset of "seurat_harmony.Rds" and contains only T-cells. In addition, the metadata was extended by the output of TCR-Seq (using the R package scRepertoire). The following script uses the objects: https://github.com/fraunhofer-izi/Braun_et_al_2024/blob/main/publication/figure_scripts/main/fig_02.R
DOI: 10.5281/zenodo.14178443
title: CRISPR-Cas9 dataset of isogenic cell lines

description: A collection of CRISPR-Cas9 isogenic (RB1, BRCA1, BRCA2) cell lines screens.
DOI: 10.5281/zenodo.14178444
title: CRISPR-Cas9 dataset of isogenic cell lines

description: A collection of CRISPR-Cas9 isogenic (RB1, BRCA1, BRCA2) cell lines screens.
DOI: 10.15468/dl.pft3d9
title: Occurrence Download

description: A dataset containing 27300 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Opuntia stricta (Haw.) Haw., Opuntia tenuiflora Small, Opuntia balearica F.A.C.Weber, Opuntia vulgaris var. balearica F.A.C.Weber, Opuntia airampo Phil., Opuntia parva A.Berger, Opuntia longiclada Griffiths, Cactus strictus Haw., Opuntia macrantha Gibbes, Opuntia balearica F.A.C.Weber ex Hirscht, Opuntia bartramii Raf., Opuntia bahamana Britton & Rose, Opuntia keyensis Britton, Opuntia bentonii Griffiths, Opuntia magnifica Small, Opuntia stricta var. stricta, Pilocereus flavispinus Rümpler, Opuntia vulgaris var. balaerica F.A.C.Weber, Pilocereus nobilis K.Schum., Opuntia macracantha Gibbes, Opuntia dillenii var. reitzii Scheinvar, Opuntia keyensis Britton ex Small, Cactus opuntia var. inermis DC., Opuntia stricta subsp. esparzae Scheinvar, ×Opulea bahamana (Britton & Rose) M.H.J.van der Meer, Consolea bahamana (Britton & Rose) A.Berger, Opuntia stricta var. reitzii (Scheinvar) Scheinvar & A.Rodr., Opuntia inermis (DC.) DC.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 27300 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015066-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sqfwcz
title: Occurrence Download

description: A dataset containing 183 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Dominican Republic, Haiti, Cuba, Puerto Rico, Jamaica)",
 "TaxonKey is Leuenbergeria"
 ]
}

 The dataset includes 183 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059019-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/8mk5-dt34
title: Long/McWain water chemistry dataset

description: Raw data for the Long/McWain water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15156/bio/sh1070682.10fu
title: SH1070682.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1070689.10fu
title: SH1070689.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1070692.10fu
title: SH1070692.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1070696.10fu
title: SH1070696.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1070697.10fu
title: SH1070697.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1070698.10fu
title: SH1070698.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1070701.10fu
title: SH1070701.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.