cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14497940.v1
title: Comparison of survival outcomes and effects of therapy between subtypes of high-grade endometrial cancer – a population-based study

description: Similarities in outcome between grade 3 endometrioid cancer and non-endometrioid histologies have been reported by a number of studies. Other reports, however, stated a significantly better prognosis for G3 endometrioid compared to type II histology. In this population-based study, we compared the outcome and treatment approaches of high-grade endometrial cancer patients with FIGO stages I–III depending on their histology. 284 high-grade endometrial cancer patients diagnosed between 1998 and 2015 were retrospectively analyzed. Overall survival (OS), recurrence-free survival (RFS), and recurrence rates were compared depending on histology. Type I G3 patients had a statistically significant OS advantage over women suffering from type II carcinoma (HR 1.527, 95%-CI 1.024–2.276; <i>p</i> = 0.038) and carcinosarcoma (HR 2.106, 95%-CI 1.270–3.493; <i>p</i> = 0.004) in univariable and multivariable Cox-regression analysis. RFS in Type I G3 was significantly superior compared to patients with carcinosarcoma (HR 1.719, 95%-CI 1.018–2.901; <i>p</i> = 0.043) and not significantly superior to type II patients (HR 1.368, 95%-CI 0.920–2.036; <i>p</i> = 0.122). Cumulative recurrence rates were significantly higher in carcinosarcoma compared to type I G3 (HR 2.217, 95%-CI 1.096–4.485; <i>p</i> = 0.027) in univariable analysis, but not after risk adjustment (HR of 1.472, 95%-CI 0.654–3.311; <i>p</i> = 0.350). The prognosis of patients with type I G3 endometrial cancer patients seems to be significantly superior to patients with type II cancer and particularly carcinosarcoma. Systematic LND seemed to be beneficial in all of the three subtypes. The benefit of adjuvant treatment methods may differ between histologies.
DOI: 10.5281/zenodo.5899869
title: SASCRiP Supporting Data

description: Data processed as described in the journal article describing, Sequencing Analysis of Single-Cell RNA in Python (SASCRiP).
DOI: 10.5281/zenodo.5910436
title: Code for APJAS publication - Numerical errors in ice microphysics parameterizations and their effects on simulated regional climate

description: In this repository, we include the source codes for WRF microphysics parameterization used in the APJAS publication "Numerical errors in ice microphysics parameterizations and their effects on simulated regional climate" There are three WDM6 codes for simulations. The original WDM6 code (ORG) using parameter defined by Hong et al (2004), the revised WDM6 code (NEW) those revised by removing the numerical errors, and the additional WDM6 code (SEN) for sensitivity experiment adopting the column-shaped parameters.
DOI: 10.5281/zenodo.5910411
title: Supplementary files of 'Deficient H2A.Z deposition is associated with genesis of uterine leiomyoma'

description: Supplementary files of DOI https://doi.org/10.1038/s41586-021-03747-1
DOI: 10.5281/zenodo.5910410
title: Supplementary files of 'Deficient H2A.Z deposition is associated with genesis of uterine leiomyoma'

description: Supplementary files of DOI https://doi.org/10.1038/s41586-021-03747-1
DOI: 10.5281/zenodo.5879071
title: Processing single-cell RNA-seq datasets using SingCellaR

description: cellranger_output.zip : Zipped files for cellranger output Code.zip: This contains the code for Step2-7 Human_genesets.zip: This includes the geneset signatures (.gmt) files we used in the protocol and original study (Roy et al, 2021) Human_HSPC_All.SingCellaR.rdata: The SingCellaR objects generated in Step 4 on a local computer ABM_1.SingCellaR.rdata: The SingCellaR objects generated in Step 3 on a local computer eFL_All.SingCellaR.rdata: The SingCellaR objects generated in Step 3 on a local computer FBM_All.SingCellaR.rdata: The SingCellaR objects generated in Step 3 on a local computer FL_All.SingCellaR.rdata: The SingCellaR objects generated in Step 3 on a local computer PBM_All.SingCellaR.rdata: The SingCellaR objects generated in Step 3 on a local computer meta.data.txt: meta data includes the donor and batch information
DOI: 10.5281/zenodo.5513770
title: Processing single-cell RNA-seq datasets using SingCellaR

description: cellranger_output.zip : Zipped files for cellranger output Code.zip: This contains the code for Step2-7 Human_genesets.zip: This includes the geneset signatures (.gmt) files we used in the protocol and original study (Roy et al, 2021) Human_HSPC_All.SingCellaR.rdata: The SingCellaR objects generated in Step 4 on a local computer ABM_1.SingCellaR.rdata: The SingCellaR objects generated in Step 3 on a local computer eFL_All.SingCellaR.rdata: The SingCellaR objects generated in Step 3 on a local computer FBM_All.SingCellaR.rdata: The SingCellaR objects generated in Step 3 on a local computer FL_All.SingCellaR.rdata: The SingCellaR objects generated in Step 3 on a local computer PBM_All.SingCellaR.rdata: The SingCellaR objects generated in Step 3 on a local computer meta.data.txt: meta data includes the donor and batch information
DOI: 10.48370/ofd/wrtqjp
title: Peniophora limitata (Chaillet: Fr.) Cooke, 582

description: Fungarium Makromycetes
DOI: 10.6084/m9.figshare.19077128
title: Supplementary Material for: Circ_0039569 Competes with MARCKS for miR-133b Binding Sites to Promote the Progression of Renal Cell Carcinoma

description: <b><i>Background:</i></b> The dysregulation of circular RNAs (circRNAs) has been shown to be correlated with the aggressiveness of renal cell carcinoma (RCC). Hence, this study investigated the role and mechanism of circ_0039569 in RCC progression. <b><i>Methods:</i></b> The levels of circ_0039569, miR-133b, and MARCKS (myristoylated alanine-rich protein kinase C substrate) were detected using quantitative real-time polymerase chain reaction and Western blot. In vitro experiments were conducted by using 5-ethynyl-2′-deoxyuridine assay, colony-formation assay, Transwell assay, flow cytometry, and Western blot. The direct interactions between miR-133b and circ_0039569 or MARCKS were verified by using dual-luciferase reporter and pull-down assays. Xenograft mice models were established to conduct in vivo analysis. <b><i>Results:</i></b> Circ_0039569 was highly expressed in RCC tissues and cells. Functionally, silencing of circ_0039569 suppressed cell proliferation, migration, and invasion, but induced cell apoptosis in RCC cells in vitro. Moreover, mice subcutaneous xenograft assay suggested that circ_0039569 knockdown impeded tumor growth in vivo. Mechanistically, circ_0039569 acted as a sponge for miR-133b to regulate the expression of its target MARCKS. Importantly, miR-133b inhibition or MARCKS knockdown attenuated the anticancer effects of circ_0039569 knockdown on RCC growth. <b><i>Conclusion:</i></b> Diminished circ_0039569 restrains the growth and propagation of RCC cells via miR-133b/MARCKS axis, indicating an underlying effective therapeutic target for RCC patients.
DOI: 10.6084/m9.figshare.19077122
title: Poplar, Moss and Soil

description: Plant ecological stoichiometry (ES) is crucial for assessing plant growth and fitness. In terms of stoichiometric patterns and associations, most studies focus primarily on single species, with fewer studies looking at association analyses among species.
DOI: 10.6084/m9.figshare.19077122.v1
title: Poplar, Moss and Soil

description: Plant ecological stoichiometry (ES) is crucial for assessing plant growth and fitness. In terms of stoichiometric patterns and associations, most studies focus primarily on single species, with fewer studies looking at association analyses among species.
DOI: 10.6084/m9.figshare.19077149
title: Organizationalchange.sav

description: Dataset associated with the article Implementing Organizational Change in Sports Organizations.
DOI: 10.6084/m9.figshare.19077149.v1
title: Organizationalchange.sav

description: Dataset associated with the article Implementing Organizational Change in Sports Organizations.
DOI: 10.6084/m9.figshare.14916737
title: Eyetracking while reading passives: an event structure account of difficulty

description: Among existing accounts of passivisation difficulty, some argue it depends on the predicate semantics (i.e. passives are more difficult with subject-experiencer than agent-patient verbs). Inconsistent with the accounts that predict passive difficulty, Paolazzi et al. (2019) found that passives were read faster than actives at the verb and object by-phrase in a series of self-paced reading experiments, with no modulation of verb type. However, self-paced reading provides limited direct measurement of late revision/interpretive processing. We used modified stimuli from Paolazzi et al. (2019) to re-examine this issue in two eye-tracking while reading experiments. We found that in late measures, passives with subject-experiencer verbs had longer fixation durations than actives at the verb and two subsequent regions but no difference was observed across agent-patient verbs. Subject-experiencer verbs provide a state, but the passive structure requires an event. Thus, the required eventive interpretation is coerced with subject-experiencers (if possible) and induces difficulty.
DOI: 10.6084/m9.figshare.14916737.v1
title: Eyetracking while reading passives: an event structure account of difficulty

description: Among existing accounts of passivisation difficulty, some argue it depends on the predicate semantics (i.e. passives are more difficult with subject-experiencer than agent-patient verbs). Inconsistent with the accounts that predict passive difficulty, Paolazzi et al. (2019) found that passives were read faster than actives at the verb and object by-phrase in a series of self-paced reading experiments, with no modulation of verb type. However, self-paced reading provides limited direct measurement of late revision/interpretive processing. We used modified stimuli from Paolazzi et al. (2019) to re-examine this issue in two eye-tracking while reading experiments. We found that in late measures, passives with subject-experiencer verbs had longer fixation durations than actives at the verb and two subsequent regions but no difference was observed across agent-patient verbs. Subject-experiencer verbs provide a state, but the passive structure requires an event. Thus, the required eventive interpretation is coerced with subject-experiencers (if possible) and induces difficulty.
DOI: 10.6084/m9.figshare.15104979
title: Age- and gender-related differences in verbal semantic processing: the development of normative electrophysiological data in the Flemish population

description: Categorical and associative relationships among words are two key forms of semantic knowledge. In this study, we examined ageing and gender effects on the processing of both types of semantic relationships by using the event-related potential technique. Moreover, we aimed to develop normative electrophysiological data for clinical purposes. One hundred and ten healthy subjects were divided among three age groups and subjected to two auditory word priming paradigms. Early auditory processing was influenced by increasing age as shown by larger P1 amplitudes and by delayed onsets of the N1 and P2. Conversely, ageing effects on the main N400 effect were limited to an increased right hemispheric lateralisation pattern for associative relationships. Gender effects could be demonstrated, with women showing larger P2 amplitudes and larger semantic priming effects in comparison to men. The interpretation of these findings is discussed and the practical utility of the obtained normative data is emphasised.
DOI: 10.6084/m9.figshare.15104979.v1
title: Age- and gender-related differences in verbal semantic processing: the development of normative electrophysiological data in the Flemish population

description: Categorical and associative relationships among words are two key forms of semantic knowledge. In this study, we examined ageing and gender effects on the processing of both types of semantic relationships by using the event-related potential technique. Moreover, we aimed to develop normative electrophysiological data for clinical purposes. One hundred and ten healthy subjects were divided among three age groups and subjected to two auditory word priming paradigms. Early auditory processing was influenced by increasing age as shown by larger P1 amplitudes and by delayed onsets of the N1 and P2. Conversely, ageing effects on the main N400 effect were limited to an increased right hemispheric lateralisation pattern for associative relationships. Gender effects could be demonstrated, with women showing larger P2 amplitudes and larger semantic priming effects in comparison to men. The interpretation of these findings is discussed and the practical utility of the obtained normative data is emphasised.
DOI: 10.6084/m9.figshare.13553710.v1
title: Acquired hemophilia A and delta storage pool deficiency in a patient with indolent non-Hodgkin lymphoma

description: B-cell lymphoproliferative diseases may be associated with acquired hemostasis disorders, such as acquired hemophilia A (AHA) caused by autoantibodies that neutralize factor VIII activity, and δ-storage pool deficiency, an abnormality of platelet function due to defective dense granules and impaired secretion. We describe the case of a 67-year-old man in whom these two acquired bleeding disorders were concomitantly present as the first clinical manifestation of an indolent non-Hodgkin lymphoma. Immunosuppressive therapy with prednisone was initially started to eradicate anti-FVIII antibodies, subsequently boosted with cyclophosphamide and rituximab, these medications being also chosen to treat the associated indolent lymphoma. Bleeding symptoms were first tackled with limited benefit by using rFVIIa and then rescued using recombinant porcine FVIII. After a 6 month’s follow-up lymphoma and AHA were in remission and platelet function was improved. This case underlines the need of multiple and complex diagnostic and therapeutic approaches to rare acquired bleeding disorders associated with lymphoproliferative diseases.
DOI: 10.6084/m9.figshare.13553710
title: Acquired hemophilia A and delta storage pool deficiency in a patient with indolent non-Hodgkin lymphoma

description: B-cell lymphoproliferative diseases may be associated with acquired hemostasis disorders, such as acquired hemophilia A (AHA) caused by autoantibodies that neutralize factor VIII activity, and δ-storage pool deficiency, an abnormality of platelet function due to defective dense granules and impaired secretion. We describe the case of a 67-year-old man in whom these two acquired bleeding disorders were concomitantly present as the first clinical manifestation of an indolent non-Hodgkin lymphoma. Immunosuppressive therapy with prednisone was initially started to eradicate anti-FVIII antibodies, subsequently boosted with cyclophosphamide and rituximab, these medications being also chosen to treat the associated indolent lymphoma. Bleeding symptoms were first tackled with limited benefit by using rFVIIa and then rescued using recombinant porcine FVIII. After a 6 month’s follow-up lymphoma and AHA were in remission and platelet function was improved. This case underlines the need of multiple and complex diagnostic and therapeutic approaches to rare acquired bleeding disorders associated with lymphoproliferative diseases.
DOI: 10.6084/m9.figshare.17371916
title: Supplementary Material for: Compared the effectiveness and safety of different methods of colorectal endoscopic submucosal dissection: a systematic review and network meta-analysis

description: Background: Traditional endoscopic submucosal dissection (ESD) has developed different methods, such as pocket method(P-ESD), traction-assisted method(T-ESD) and Hybrid method(H-ESD). In this meta-analysis, the benefits and drawbacks of different ESD methods were discussed and ranked. Study design: Studies comparing different methods of colorectal ESD were searched by PubMed, Embase, and Cochrane Library databases. The study was conducted for five endpoints: en bloc resection rate, R0 resection rate, operation time, dissection speed, and adverse events rate. Pairwise and network meta-analyses were performed through Rev Man 5.4 and Stata 16.0. The quality of all included studies was assessed using the Cochrane Risk of Bias Tool and Newcastle-Ottawa Scale. Results: Twenty-six studies met the inclusion criteria, including 7 RCTs and 19 non-RCTs, with a total of 3002 patients. The pooled analysis showed that the en bloc resection rate of H-ESD was significantly lower than C-ESD, P-ESD and T-ESD [RR=0.28, 95%CI (0.12, 0.65); RR = 0.11, 95% CI (0.03, 0.44); RR = 8.28, 95% CI (2.50, 27.42)]. Compared with C-ESD, the operation time of H-ESD and T-ESD was significantly shorter [MD=-21.83, 95%CI (-34.76, -8.90); MD=-23.8, 95%CI (-32.55, -15.06)]. Meanwhile, the operation time of T-ESD was also significantly shorter than P-ESD [MD=-18.74, 95%CI (-31.93, -5.54)]. The dissection speed of T-ESD was significantly faster than C-ESD [MD=6.26, 95%CI (2.29, 10.23)]. Conclusion: P-ESD and T-ESD are probably the two best methods of colorectal ESD at present. The advantages of P-ESD are high en bloc resection rate and low incidence of adverse events. The advantages of T-ESD are rapid dissection and short operation time.
DOI: 10.6084/m9.figshare.17371916.v1
title: Supplementary Material for: Compared the effectiveness and safety of different methods of colorectal endoscopic submucosal dissection: a systematic review and network meta-analysis

description: Background: Traditional endoscopic submucosal dissection (ESD) has developed different methods, such as pocket method(P-ESD), traction-assisted method(T-ESD) and Hybrid method(H-ESD). In this meta-analysis, the benefits and drawbacks of different ESD methods were discussed and ranked. Study design: Studies comparing different methods of colorectal ESD were searched by PubMed, Embase, and Cochrane Library databases. The study was conducted for five endpoints: en bloc resection rate, R0 resection rate, operation time, dissection speed, and adverse events rate. Pairwise and network meta-analyses were performed through Rev Man 5.4 and Stata 16.0. The quality of all included studies was assessed using the Cochrane Risk of Bias Tool and Newcastle-Ottawa Scale. Results: Twenty-six studies met the inclusion criteria, including 7 RCTs and 19 non-RCTs, with a total of 3002 patients. The pooled analysis showed that the en bloc resection rate of H-ESD was significantly lower than C-ESD, P-ESD and T-ESD [RR=0.28, 95%CI (0.12, 0.65); RR = 0.11, 95% CI (0.03, 0.44); RR = 8.28, 95% CI (2.50, 27.42)]. Compared with C-ESD, the operation time of H-ESD and T-ESD was significantly shorter [MD=-21.83, 95%CI (-34.76, -8.90); MD=-23.8, 95%CI (-32.55, -15.06)]. Meanwhile, the operation time of T-ESD was also significantly shorter than P-ESD [MD=-18.74, 95%CI (-31.93, -5.54)]. The dissection speed of T-ESD was significantly faster than C-ESD [MD=6.26, 95%CI (2.29, 10.23)]. Conclusion: P-ESD and T-ESD are probably the two best methods of colorectal ESD at present. The advantages of P-ESD are high en bloc resection rate and low incidence of adverse events. The advantages of T-ESD are rapid dissection and short operation time.
DOI: 10.6084/m9.figshare.19076825
title: Datasets, R scripts and full model selection tables

description: Datasets and R scripts for the following analyses:<br>(i) Predicting jackdaws' roost departure time relative to sunrise from the rate of change in calling intensity and the final calling intensity in the minute before departure, while also accounting for meteorological variables.<br>(ii) Predicting the proportion of roost members departing together from the same calling variables as above.<br>(iii) Testing the effect of playback experiments (jackdaw calling and a control made of wind noise) on roost departure time, plus supplementary analyses.<br>Full model selection tables are provided for (i) and (ii).<br>Data files for additional analyses are also provided, along with a README file to explain file headers and which analyses they each refer to.
DOI: 10.6084/m9.figshare.19076825.v2
title: Datasets, R scripts and full model selection tables

description: Datasets and R scripts for the following analyses:<br>(i) Predicting jackdaws' roost departure time relative to sunrise from the rate of change in calling intensity and the final calling intensity in the minute before departure, while also accounting for meteorological variables.<br>(ii) Predicting the proportion of roost members departing together from the same calling variables as above.<br>(iii) Testing the effect of playback experiments (jackdaw calling and a control made of wind noise) on roost departure time, plus supplementary analyses.<br>Full model selection tables are provided for (i) and (ii).<br>Data files for additional analyses are also provided, along with a README file to explain file headers and which analyses they each refer to.
DOI: 10.6084/m9.figshare.19076825.v1
title: Datasets, R code and full model selection tables

description: Datasets and R code for the following analyses:<br>(i) Predicting jackdaws' roost departure time relative to sunrise from the rate of change in calling intensity and the final calling intensity in the minute before departure, while also accounting for meteorological variables.<br>(ii) Predicting the proportion of roost members departing together from the same calling variables as above.<br>(iii) Testing the effect of playback experiments (jackdaw calling and a control made of wind noise) on roost departure time, plus supplementary analyses.<br>Full model selection tables are provided for (i) and (ii).<br>Data files for additional analyses are also provided, along with a README file to explain file headers and which analyses they each refer to.
DOI: 10.5517/ccdc.csd.cc2124dp
title: CCDC 1878891: Experimental Crystal Structure Determination

description: Related Article: Yang Liu, Yong-Zhi Li, Ge Liu, Bin Liu, Lei Hou, Yao-Yu Wang|2019|J.Solid State Chem.|270|516|doi:10.1016/j.jssc.2018.12.026
DOI: 10.5517/ccdc.csd.cc2124fq
title: CCDC 1878892: Experimental Crystal Structure Determination

description: Related Article: Yang Liu, Yong-Zhi Li, Ge Liu, Bin Liu, Lei Hou, Yao-Yu Wang|2019|J.Solid State Chem.|270|516|doi:10.1016/j.jssc.2018.12.026
DOI: 10.5517/ccdc.csd.cc2124gr
title: CCDC 1878893: Experimental Crystal Structure Determination

description: Related Article: Yang Liu, Yong-Zhi Li, Ge Liu, Bin Liu, Lei Hou, Yao-Yu Wang|2019|J.Solid State Chem.|270|516|doi:10.1016/j.jssc.2018.12.026
DOI: 10.5517/ccdc.csd.cc2124hs
title: CCDC 1878894: Experimental Crystal Structure Determination

description: Related Article: Yang Liu, Yong-Zhi Li, Ge Liu, Bin Liu, Lei Hou, Yao-Yu Wang|2019|J.Solid State Chem.|270|516|doi:10.1016/j.jssc.2018.12.026
DOI: 10.5517/ccdc.csd.cc2124jt
title: CCDC 1878895: Experimental Crystal Structure Determination

description: Related Article: Yang Liu, Yong-Zhi Li, Ge Liu, Bin Liu, Lei Hou, Yao-Yu Wang|2019|J.Solid State Chem.|270|516|doi:10.1016/j.jssc.2018.12.026
DOI: 10.5517/ccdc.csd.cc24303d
title: CCDC 1969092: Experimental Crystal Structure Determination

description: Related Article: Zhi-Xiang Wang, Hai-Xin Tian, Jian-Gang Ding, Bao-Long Li, Bing Wu|2020|Acta Crystallogr.,Sect.C:Cryst.Struct.Chem.|76|23|doi:10.1107/S2053229619016097
DOI: 10.5517/ccdc.csd.cc2745j3
title: CCDC 2059594: Experimental Crystal Structure Determination

description: Related Article: Zhenxing Zhang, Yang Liu, Yaxin Wang|2021|CSD Communication|||
DOI: 10.5281/zenodo.5910672
title: RECAID

description: The SRD dataset provides data on ChildFund Brasil Sponsorship Program in Portuguese. ChildFund Brasil is a Brazilian NGO (non-government organization) that support social programs around the country, particularly for children (beneficiaries) in poor communities. The dataset provide anonymized tabular data on beneficiaries and sponsors.