cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.rpzuxy
title: Occurrence Download

description: A dataset containing 122 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psoralea uncinata Eckl. & Zeyh."
 ]
}

 The dataset includes 122 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085599-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wk9jfs
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prunus wendelboi (Freitag) Eisenman"
 ]
}

 The dataset includes 4 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085600-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u2s46w
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psychotria srilankensis Ruhsam"
 ]
}

 The dataset includes 18 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085601-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uhaw9s
title: Occurrence Download

description: A dataset containing 1023 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Festuca ovina L.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1023 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085602-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.usxh5f
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Armeria aspromontana Brullo, F.Scelsi & G.Spampinato",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085605-240321170329656/datasets/export for details.
DOI: 10.15468/dl.tqvkaj
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Portulaca macrorhiza R.Geesink"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085603-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qftzcv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "GenusKey" : [
 "is Afzelia Sm."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085608-240321170329656/datasets/export for details.
DOI: 10.15468/dl.bnspnh
title: Occurrence Download

description: A dataset containing 1386 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Populus tremula var. davidiana (Dode) C.K.Schneid.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1386 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085607-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.29ec27
title: Occurrence Download

description: A dataset containing 102 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ptycholobium plicatum (Oliv.) Harms"
 ]
}

 The dataset includes 102 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085606-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k9fgqr
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Primula kialensis Franch."
 ]
}

 The dataset includes 62 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085609-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8w6gmv
title: Occurrence Download

description: A dataset containing 254 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psoralea usitata C.H.Stirt."
 ]
}

 The dataset includes 254 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085610-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j86zw9
title: Occurrence Download

description: A dataset containing 854 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prunus wilsonii (C.K.Schneid.) Koehne"
 ]
}

 The dataset includes 854 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085611-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4s5apj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Armeria bigerrensis (Pau ex C.Vicioso & Beltrán) Rivas Mart.",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085613-240321170329656/datasets/export for details.
DOI: 10.15468/dl.vsxv94
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Portulaca massaica S.M.Phillips"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085614-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yqev93
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psychotria stenantha A.C.Sm."
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085612-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m5ahuk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Festuca glauca Vill.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085615-240321170329656/datasets/export for details.
DOI: 10.15468/dl.jpbtaj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "GenusKey" : [
 "is Afzelia Sm."
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085617-240321170329656/datasets/export for details.
DOI: 10.15468/dl.6dv2dm
title: Occurrence Download

description: A dataset containing 476 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ptychopetalum anceps Oliv."
 ]
}

 The dataset includes 476 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085618-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yhn25u
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Primula kingii G.Watt"
 ]
}

 The dataset includes 26 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085619-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p7ngc3
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ulmus laciniata (Herder) Mayr ex Schwapp.",
 "Country is China",
 "Year is greater than or equal to 1900",
 "HasCoordinate is true"
 ]
}

 The dataset includes 105 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085621-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s3cngv
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psoralea velutina E.Mey."
 ]
}

 The dataset includes 39 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085620-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.64zmxb
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PublishingCountry is Canada",
 "TaxonKey is one of (Amelanchier intermedia Blanch.)"
 ]
}

 The dataset includes 27 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085622-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.efrj5n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Armeria brutia Brullo, Gangale & Uzunov",
 "HasCoordinate is true",
 "Country is Iceland",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 "CoordinateUncertaintyInMeters is less than 10000"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085623-240321170329656/datasets/export for details.
DOI: 10.15468/dl.3a5e58
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prunus yunkaishanensis B.H.Wu, W.Y.Zhao & W.B.Liao"
 ]
}

 The dataset includes 56 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085624-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p9bnq6lf
title: High and average water table estimates for Clover Creek watershed, Pierce County, Washington

description: The depths to a high and average water table below the land surface were estimated across the Clover Creek watershed in Pierce County, Washington. Groundwater model simulations provided initial estimates of water-table depths for the analysis. To provide optimized, data-driven estimates of these depths, a continuous bias correction surface was applied to model output according to differences between simulated and observed water levels at observation wells.
DOI: 10.15468/dl.qz9ep7
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Portulaca mauritiensis Poelln."
 ]
}

 The dataset includes 105 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085626-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aqs2e3
title: Occurrence Download

description: A dataset containing 332 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psychotria stenostegia O.Lachenaud"
 ]
}

 The dataset includes 332 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085625-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.da6468
title: Occurrence Download

description: A dataset containing 13183 species occurrences available in GBIF matching the query:
{
 "GenusKey" : [
 "is Afzelia Sm."
 ]
}

 The dataset includes 13183 records from 268 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085627-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mg45cq
title: Occurrence Download

description: A dataset containing 127 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Primula kisoana Miq."
 ]
}

 The dataset includes 127 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085629-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7yqg8c
title: Occurrence Download

description: A dataset containing 454 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ptychopetalum petiolatum Oliv."
 ]
}

 The dataset includes 454 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085628-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8a5y6u
title: Occurrence Download

description: A dataset containing 666 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Macrodon ancylodon (Bloch & Schneider, 1801))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 666 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085631-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dvfqqy
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Psoralea venusta Eckl. & Zeyh."
 ]
}

 The dataset includes 36 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085630-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.19144749
title: Additional file 5 of H3K27ac chromatin acetylation and gene expression analysis reveal sex- and situs-related differences in developing chicken gonads

description: Additional file 5: Table S5. The peak and expression data of the sex-specific H3K27ac chromatin modifications and the associated genes.
DOI: 10.6084/m9.figshare.19144743
title: Additional file 3 of H3K27ac chromatin acetylation and gene expression analysis reveal sex- and situs-related differences in developing chicken gonads

description: Additional file 3: Table S3. The detailed DEGs and H3K27ac peaks from RNA-Seq & ChIP-Seq sequencing.
DOI: 10.6084/m9.figshare.19144743.v1
title: Additional file 3 of H3K27ac chromatin acetylation and gene expression analysis reveal sex- and situs-related differences in developing chicken gonads

description: Additional file 3: Table S3. The detailed DEGs and H3K27ac peaks from RNA-Seq & ChIP-Seq sequencing.
DOI: 10.6084/m9.figshare.19144749.v1
title: Additional file 5 of H3K27ac chromatin acetylation and gene expression analysis reveal sex- and situs-related differences in developing chicken gonads

description: Additional file 5: Table S5. The peak and expression data of the sex-specific H3K27ac chromatin modifications and the associated genes.
DOI: 10.6084/m9.figshare.19144752
title: Additional file 6 of H3K27ac chromatin acetylation and gene expression analysis reveal sex- and situs-related differences in developing chicken gonads

description: Additional file 6: Table S6. The peak and expression data of the situs-specific H3K27ac chromatin modifications and the associated genes.
DOI: 10.6084/m9.figshare.19144752.v1
title: Additional file 6 of H3K27ac chromatin acetylation and gene expression analysis reveal sex- and situs-related differences in developing chicken gonads

description: Additional file 6: Table S6. The peak and expression data of the situs-specific H3K27ac chromatin modifications and the associated genes.
DOI: 10.6084/m9.figshare.19144846
title: Additional file 1 of Mapping the m1A, m5C, m6A and m7G methylation atlas in zebrafish brain under hypoxic conditions by MeRIP-seq

description: Additional file 1. Supplemental Table 1. Detailed information of the methylated genes and the methylated nucleotides on the mRNAs.
DOI: 10.6084/m9.figshare.19144846.v1
title: Additional file 1 of Mapping the m1A, m5C, m6A and m7G methylation atlas in zebrafish brain under hypoxic conditions by MeRIP-seq

description: Additional file 1. Supplemental Table 1. Detailed information of the methylated genes and the methylated nucleotides on the mRNAs.
DOI: 10.6084/m9.figshare.19144849
title: Additional file 2 of Mapping the m1A, m5C, m6A and m7G methylation atlas in zebrafish brain under hypoxic conditions by MeRIP-seq

description: Additional file 2. Supplemental Table 2. Differentially expressed genes analyzed in this study.
DOI: 10.6084/m9.figshare.19144849.v1
title: Additional file 2 of Mapping the m1A, m5C, m6A and m7G methylation atlas in zebrafish brain under hypoxic conditions by MeRIP-seq

description: Additional file 2. Supplemental Table 2. Differentially expressed genes analyzed in this study.
DOI: 10.6084/m9.figshare.12853413
title: Investigation into archaeal extremophilic lifestyles through comparative proteogenomic analysis

description: Archaea are a group of primary life forms on Earth and could thrive in many unique environments. Their successful colonization of extreme niches requires corresponding adaptations at proteogenomic level in order to maintain stable cellular structures and active physiological functions. Although some studies have already investigated the extremophilic lifestyles of archaeal species based on genomic features and protein structures, there is a lack of comparative proteogenomic analysis in a large scale. In this study, we explored 686 high-quality archaeal genomes (proteomes) sourced from the Pathosystems Resource Integration Center (PATRIC) database. General patterns of genomic features such as genome size, coding capacity (coding genes and non-coding regions), and G + C contents were re-confirmed. Protein domain distribution patterns were then identified across archaeal species. Domains with unknown functions (DUFs) and mini proteins were investigated in terms of their distributions due to their importance in archaeal physiological functions. In addition, physicochemical properties of protein sequences, such as stability, hydrophobicity, isoelectric point, aromaticity and amino acid compositions in corresponding archaeal groups were compared. Unique features associated with extremophilic lifestyles were observed, which suggested that evolutionary adaptations to different extreme environments had intrinsic impacts on archaeal protein features. Taken together, this systematic study facilitates a better understanding of the mechanisms behind the extremophilic lifestyles of archaeal species, which will further contribute to the evolutionary explorations of archaeal adaptations both experimentally and theoretically in the future studies. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.12853413.v1
title: Investigation into archaeal extremophilic lifestyles through comparative proteogenomic analysis

description: Archaea are a group of primary life forms on Earth and could thrive in many unique environments. Their successful colonization of extreme niches requires corresponding adaptations at proteogenomic level in order to maintain stable cellular structures and active physiological functions. Although some studies have already investigated the extremophilic lifestyles of archaeal species based on genomic features and protein structures, there is a lack of comparative proteogenomic analysis in a large scale. In this study, we explored 686 high-quality archaeal genomes (proteomes) sourced from the Pathosystems Resource Integration Center (PATRIC) database. General patterns of genomic features such as genome size, coding capacity (coding genes and non-coding regions), and G + C contents were re-confirmed. Protein domain distribution patterns were then identified across archaeal species. Domains with unknown functions (DUFs) and mini proteins were investigated in terms of their distributions due to their importance in archaeal physiological functions. In addition, physicochemical properties of protein sequences, such as stability, hydrophobicity, isoelectric point, aromaticity and amino acid compositions in corresponding archaeal groups were compared. Unique features associated with extremophilic lifestyles were observed, which suggested that evolutionary adaptations to different extreme environments had intrinsic impacts on archaeal protein features. Taken together, this systematic study facilitates a better understanding of the mechanisms behind the extremophilic lifestyles of archaeal species, which will further contribute to the evolutionary explorations of archaeal adaptations both experimentally and theoretically in the future studies. Communicated by Ramaswamy H. Sarma