cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ejqjja
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((88.826497 23.904442, 88.74968699999999 23.898865, 88.67478800000001 23.882273, 88.60366 23.855078, 88.53807 23.817957, 88.479641 23.771831, 88.42981399999999 23.717844, 88.38981200000001 23.657336, 88.360613 23.591802, 88.34292000000001 23.522864, 88.337153 23.452222, 88.343434 23.381616, 88.361591 23.312785, 88.391158 23.247419, 88.43139600000001 23.18712, 88.48130399999999 23.133367, 88.539652 23.087474, 88.605006 23.050563, 88.675765 23.023535, 88.750201 23.00705, 88.826497 23.00151, 88.902793 23.00705, 88.97722899999999 23.023535, 89.047988 23.050563, 89.113342 23.087474, 89.17169 23.133367, 89.221598 23.18712, 89.261836 23.247419, 89.291403 23.312785, 89.30956 23.381616, 89.31584100000001 23.452222, 89.310074 23.522864, 89.29238100000001 23.591802, 89.263182 23.657336, 89.22318 23.717844, 89.17335300000001 23.771831, 89.114924 23.817957, 89.049334 23.855078, 88.978206 23.882273, 88.903307 23.898865, 88.826497 23.904442))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006215-260120142942310/datasets/export for details.
DOI: 10.15468/dl.ue78db
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((89.0942 23.910152, 89.017387 23.904575, 88.94248399999999 23.887983, 88.871354 23.860789, 88.80576000000001 23.823667, 88.74732899999999 23.777541, 88.69749899999999 23.723555, 88.65749599999999 23.663046, 88.62829600000001 23.597513, 88.610602 23.528575, 88.60483499999999 23.457932, 88.61111699999999 23.387327, 88.629274 23.318496, 88.65884200000001 23.25313, 88.699082 23.192831, 88.748992 23.139078, 88.807343 23.093185, 88.87269999999999 23.056274, 88.943462 23.029247, 89.01790099999999 23.012762, 89.0942 23.007222, 89.17049900000001 23.012762, 89.244938 23.029247, 89.31570000000001 23.056274, 89.381057 23.093185, 89.439408 23.139078, 89.489318 23.192831, 89.52955799999999 23.25313, 89.55912600000001 23.318496, 89.57728299999999 23.387327, 89.58356499999999 23.457932, 89.577798 23.528575, 89.560104 23.597513, 89.53090400000001 23.663046, 89.49090099999999 23.723555, 89.44107099999999 23.777541, 89.38263999999999 23.823667, 89.317046 23.860789, 89.24591599999999 23.887983, 89.171013 23.904575, 89.0942 23.910152))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006217-260120142942310/datasets/export for details.
DOI: 10.15468/dl.3dfc8g
title: Occurrence Download

description: A dataset containing 7865 records in GBIF matching the query:
SELECT
 '140' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= -8.098015256935714
 AND decimalLatitude &lt;= -4.045127286108716
 AND decimalLongitude &gt;= 104.927959183943
 AND decimalLongitude &lt;= 110.43629222017543
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 7865 records were derived from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006206-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3zmy5q
title: Occurrence Download

description: A dataset containing 4440 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyananthus"
 ]
}

 The dataset includes 4440 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006218-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6tz2vh
title: Occurrence Download

description: A dataset containing 17721 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cymbidium"
 ]
}

 The dataset includes 17721 records from 279 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006219-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wp2skn
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Kazakhstan",
 "Geometry POLYGON((48.01838 12.61522,139.98162 12.61522,139.98162 49.38478,48.01838 49.38478,48.01838 12.61522))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ikonnikovia kaufmanniana"
 ]
}

 The dataset includes 15 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006221-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8fffa4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((89.41719999999999 23.915352, 89.340384 23.909775, 89.265478 23.893183, 89.194345 23.865988, 89.128749 23.828867, 89.07031499999999 23.782741, 89.020484 23.728755, 88.980479 23.668246, 88.951277 23.602713, 88.933583 23.533774, 88.92781600000001 23.463132, 88.93409800000001 23.392527, 88.95225600000001 23.323696, 88.981826 23.25833, 89.022066 23.198031, 89.071979 23.144278, 89.130332 23.098385, 89.195691 23.061474, 89.26645600000001 23.034447, 89.340898 23.017962, 89.41719999999999 23.012422, 89.49350200000001 23.017962, 89.567944 23.034447, 89.63870900000001 23.061474, 89.70406800000001 23.098385, 89.762421 23.144278, 89.81233400000001 23.198031, 89.852574 23.25833, 89.882144 23.323696, 89.900302 23.392527, 89.906584 23.463132, 89.900817 23.533774, 89.883123 23.602713, 89.853921 23.668246, 89.81391600000001 23.728755, 89.76408499999999 23.782741, 89.705651 23.828867, 89.640055 23.865988, 89.568922 23.893183, 89.494016 23.909775, 89.41719999999999 23.915352))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006220-260120142942310/datasets/export for details.
DOI: 10.6084/m9.figshare.29856866
title: Annotated Metagenome-Assembled Genomes (MAGs) from the Southern California Bight

description: This dataset contains metagenome-assembled genomes (MAGs) reconstructed from four environmental metagenomes collected from the Southern California Bight. A co-assembly was generated using MEGAHIT, and genome binning was performed using a combination of MetaBAT2, CONCOCT, and SemiBin2, followed by refinement and dereplication with MetaWRAP and dRep, respectively.All MAGs were annotated using Prokka. Two filtering strategies were applied to select high- and medium-quality MAGs:<b>Initial filter</b>: Completeness ≥50%, contamination ≤10%, resulting in <b>174 MAGs</b>.<b>Stricter filter</b>: Completeness ≥70%, contamination ≤5%, and N50 ≥10,000 bp, resulting in <b>74 high-quality MAGs</b>.This archive includes the annotated Prokka output directories for all 174 MAGs, each labeled with the prefix <code>SPOT_MAG_XXX</code>.prokkaThese annotated MAGs can be used for downstream functional or phylogenetic analyses in marine microbiome research.
DOI: 10.6084/m9.figshare.29856866.v1
title: Annotated Metagenome-Assembled Genomes (MAGs) from the Southern California Bight

description: This dataset contains metagenome-assembled genomes (MAGs) reconstructed from four environmental metagenomes collected from the Southern California Bight. A co-assembly was generated using MEGAHIT, and genome binning was performed using a combination of MetaBAT2, CONCOCT, and SemiBin2, followed by refinement and dereplication with MetaWRAP and dRep, respectively.All MAGs were annotated using Prokka. Two filtering strategies were applied to select high- and medium-quality MAGs:<b>Initial filter</b>: Completeness ≥50%, contamination ≤10%, resulting in <b>174 MAGs</b>.<b>Stricter filter</b>: Completeness ≥70%, contamination ≤5%, and N50 ≥10,000 bp, resulting in <b>74 high-quality MAGs</b>.This archive includes the annotated Prokka output directories for all 174 MAGs, each labeled with the prefix <code>SPOT_MAG_XXX</code>.These annotated MAGs can be used for downstream functional or phylogenetic analyses in marine microbiome research.
DOI: 10.6084/m9.figshare.29856866.v2
title: Annotated Metagenome-Assembled Genomes (MAGs) from the Southern California Bight

description: This dataset contains metagenome-assembled genomes (MAGs) reconstructed from four environmental metagenomes collected from the Southern California Bight. A co-assembly was generated using MEGAHIT, and genome binning was performed using a combination of MetaBAT2, CONCOCT, and SemiBin2, followed by refinement and dereplication with MetaWRAP and dRep, respectively.All MAGs were annotated using Prokka. Two filtering strategies were applied to select high- and medium-quality MAGs:<b>Initial filter</b>: Completeness ≥50%, contamination ≤10%, resulting in <b>174 MAGs</b>.<b>Stricter filter</b>: Completeness ≥70%, contamination ≤5%, and N50 ≥10,000 bp, resulting in <b>74 high-quality MAGs</b>.This archive includes the annotated Prokka output directories for all 174 MAGs, each labeled with the prefix <code>SPOT_MAG_XXX</code>.prokkaThese annotated MAGs can be used for downstream functional or phylogenetic analyses in marine microbiome research.
DOI: 10.15468/dl.ysse8f
title: Occurrence Download

description: A dataset containing 2209227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fabaceae",
 "Continent is one of (Africa, South America)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 2209227 records from 1749 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006179-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.14278/rodare.2770
title: Measurement of the axial gas dispersion coefficient in bubble columns of several diameters via gas flow modulation

description: This dataset was aquired during gas flow modualtion experiments for determining the axial gas dispersion coefficient in bubble columns. The applied measurement technique is gamma-ray densitometry and the dataset consists of densitometry measurements at several axial positions in the bubble columns. Columns of 100, 150 and 330 mm internal diameter were tested. The 100 mm ID column was tested with three different gas spargers to investigate the effect of the gas distributor on gas dispersion. Several operating conditions were tested inside of the homogenous flow regime. 

Please refer to the attached Excel for details of single files.
description: This research was financially supported by DFG, grant HA 3088/18-1
DOI: 10.14278/rodare.2769
title: Measurement of the axial gas dispersion coefficient in bubble columns of several diameters via gas flow modulation

description: This dataset was aquired during gas flow modualtion experiments for determining the axial gas dispersion coefficient in bubble columns. The applied measurement technique is gamma-ray densitometry and the dataset consists of densitometry measurements at several axial positions in the bubble columns. Columns of 100, 150 and 330 mm internal diameter were tested. The 100 mm ID column was tested with three different gas spargers to investigate the effect of the gas distributor on gas dispersion. Several operating conditions were tested inside of the homogenous flow regime. 

Please refer to the attached Excel for details of single files.
description: This research was financially supported by DFG, grant HA 3088/18-1
DOI: 10.15468/dl.n5fu25
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cistanche mongolica"
 ]
}

 The dataset includes 4 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049459-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57967/hf/6103
title: full-awakening-manual-AI
DOI: 10.57967/hf/6353
title: full-awakening-manual-AI
DOI: 10.15468/dl.v8h35b
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-123.38286 36.13604,-91.61714 36.13604,-91.61714 48.86396,-123.38286 48.86396,-123.38286 36.13604))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Iotichthys phlegethontis",
 "Year 1970-2020"
 ]
}

 The dataset includes 7 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032215-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.57m3m7
title: Occurrence Download

description: A dataset containing 67916 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 67916 records from 193 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032195-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bapdjq
title: Occurrence Download

description: A dataset containing 8430 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((154.64732 42.97017,126.96117 55.68324,100.68748 46.92534,91.36458 28.27953,95.31975 14.43641,113.11805 11.61135,119.05082 20.08665,139.67424 21.2167,154.64732 42.97017))",
 "TaxonKey is Rosa multiflora"
 ]
}

 The dataset includes 8430 records from 160 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032216-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17600049
title: Supplementary Information: An Exploratory Study on Knowledge-Augmented Question-Answering Application for Zymomonas mobilis

description: This repository contains the publicly released subset of a domain-specific evaluation dataset developed for the study. The dataset is designed to assess how effectively knowledge-augmented QA systems handle specialized terminology, mechanisms, and factual assertions in synthetic biology.


Questions are constructed from 22 peer-reviewed publications on the physiology, metabolism, and engineering of Zymomonas mobilis. All items were curated through text filtering, core-information extraction, and expert review to ensure scientific accuracy.


The open subset includes 87 question–answer pairs are stored in JSON format, following a structure adapted from established biomedical QA datasets, consisting of true/false and multiple choice questions.
DOI: 10.15468/dl.ptstpf
title: Occurrence Download

description: A dataset containing 1127 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-106.4688 21.29913, -106.3188 21.29913, -106.3188 21.44913, -106.4688 21.44913, -106.4688 21.29913))"
 ]
}

 The dataset includes 1127 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032218-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2bb9zb
title: Occurrence Download

description: A dataset containing 6744 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Balanites glabra, Barleria volkensii, Blepharispermum zanguebaricum, Boscia coriacea, Boscia minimifolia, Boswellia neglecta, Boswellia rivae, Bottegoa insignis, Bourreria lyciacea, Bridelia taitensis, Brochoneura usambarensis, Buckollia volubilis, Bullockia pseudosetiflora, Buxus obtusifolia, Cadaba ruspolii, Calyptrotheca somalensis, Calyptrotheca taitensis, Caucanthus albidus, Celosia hastata, Cenchrus squamulatus, Ceropegia distincta, Chascanum hildebrandtii, Chlorophytum suffruticosum, Chytranthus obliquinervis, Chytranthus obliquinervis, Chytranthus prieurianus, Cleome parvipetala, Coccinia trilobata, Coffea fadenii, Coffea pseudozanguebariae, Coffea sessiliflora, Commiphora baluensis, Commiphora boranensis, Commiphora campestris, Commiphora corrugata, Commiphora cyclophylla, Commiphora cyclophylla, Commiphora gurreh, Commiphora hildebrandtii, Commiphora mildbraedii, Commiphora paolii, Commiphora rostrata, Commiphora samharensis, Commiphora unilobata, Conostomium longitubum, Conostomium quadrangulare, Cordeauxia edulis, Crotalaria keniensis, Crotalaria mauensis, Crotalaria phillipsiae, Croton somalensis, Croton talaeporos, Cucumis carolinus, Cucumis insignis, Cucumis jeffreyanus, Cucumis kelleri, Cynanchum somaliense, Cynometra webberi, Sericocomopsis hildebrandtii, Cyperus kilimandscharicus, Cyperus grandibulbosus, Cyphostemma maranguense, Cyphostemma pseudonjegerre)"
 ]
}

 The dataset includes 6744 records from 102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032217-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ukc98f
title: Occurrence Download

description: A dataset containing 15237 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "Geometry POLYGON((81 27, 83 27, 83 28, 81 28, 81 27))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15237 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032219-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cbebcf
title: Occurrence Download

description: A dataset containing 1993 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((174.70575 52.29314,157.47247 70.37391,130.35127 67.54879,112.55297 48.90295,108.5978 26.30196,118.76825 15.56646,157.75491 26.58447,174.70575 52.29314))",
 "TaxonKey is Rosa rugosa"
 ]
}

 The dataset includes 1993 records from 98 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032221-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3fd6r2
title: Occurrence Download

description: A dataset containing 1328 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-106.3188 21.29913, -106.1688 21.29913, -106.1688 21.44913, -106.3188 21.44913, -106.3188 21.29913))"
 ]
}

 The dataset includes 1328 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032220-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.7873265
title: Cervical cerclage, pessary, or vaginal progesterone in high-risk pregnant women with short cervix: a randomized feasibility study

description: <b>Objective:</b> To assess feasibility for a definitive randomized controlled trial (RCT) comparing three treatments for short cervix in a population at high risk for spontaneous preterm birth (sPTB) over a 1-year period. <b>Design:</b> Three arm, open label feasibility randomized clinical study. <b>Methods:</b> Women with singleton pregnancy with risk factors for sPTB (history of sPTB or prelabor premature rupture of membranes (PPROM) &lt;34 weeks or significant cervical surgery), and short cervix on transvaginal ultrasound scan detected between 16<sup>+0</sup> and 24<sup>+6</sup> weeks gestation were randomized to receive either cervical cerclage, vaginal pessary, or vaginal progesterone 200 mg nocte. Pregnancy outcomes and treatment costs were collected from hospital records, NHS Reference costs, and British National Formulary costs. <b>Main outcome measures:</b> Feasibility targets were defined as (i) at least 55% of eligible women randomized; (ii) maximum 5% failure to adhere to the protocol per arm; (iii) maximum 5% loss to short-term follow-up. <b>Results:</b> Of 417 women screened between October 2015 and 2016, 25 (6%) were eligible for trial inclusion, of whom 18 (72%) agreed to participate at the rate 0.75 participants/site/month. Adherence to protocol was 100% in pessary and cerclage arms and 80% in vaginal progesterone arm (95% CI 24–100%). No participants were lost to follow up. Cost of interventions accounted for 6% (95% CI 2–10%) of overall health care expenditure. <b>Conclusions:</b> A definitive clinical trial comparing treatments for prevention of sPTB in high-risk women with short cervix is feasible but will be challenging due to small numbers of eligible participants.