cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26058133
title: Characterizing evolution of defense in a tripartite marine symbiosis system using adaptive dynamics

description: The evolution and maintenance of symbiotic systems remains a fascinating puzzle. While the coevolutionary dynamics of bipartite (host-symbiont) systems are well-studied, the dynamics of more complex systems have only recently garnered attention with increasing technological advances. We model a tripartite system inspired by the marine symbiotic relationship between the alga \emph{Bryopsis} sp., its intracellular defensive bacterial symbiont ``\emph{Candidatus} Endobryopsis kahalalidefaciens", which produces a toxin that protects the alga against fish herbivores, and the sea-slug \emph{Elysia rufescens} \citep{zan2019microbial}, which is not deterred by the toxin. We disentangle the role of selection on different actors within this system by investigating evolutionary scenarios where defense evolves as i) a host-controlled trait that reduces algal reproductive ability; ii) a symbiont-controlled trait that impacts symbiont transmission; and iii) a trait jointly controlled by both host and symbiont. Optimal investment in defensive toxins varies based on the characteristics of the host, symbiont, and sea slug; and evolutionary trajectories are modulated by trade-off shape, i.e., a strongly decelerating trade-off between defense and symbiont transmission can drive symbiont diversification via evolutionary branching. Increasing slug herbivory reduces host investment in defense to favour reproduction, while symbiont investment in defense first declines and then increases as host density declines to the degree that horizontal symbiont transmission is no longer beneficial. Increasing vertical transmission selects for reduced defense by the host when it evolves as a jointly controlled trait, as a result of investment by the symbiont. Our theoretical exploration of the evolution of defensive symbiosis in scenarios involving interactions with multiple herbivores provides a first window onto the origin and maintenance of the \emph{Bryopsis} sp. system, and adds another piece to the puzzle of evolution of symbiotic systems.
DOI: 10.60712/si-id53532.1
title: StrainInfo SI-ID 53532.1

description: StrainInfo dataset 53532 about a strain of Enterobacteriaceae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.26058133.v1
title: Characterizing evolution of defense in a tripartite marine symbiosis system using adaptive dynamics

description: The evolution and maintenance of symbiotic systems remains a fascinating puzzle. While the coevolutionary dynamics of bipartite (host-symbiont) systems are well-studied, the dynamics of more complex systems have only recently garnered attention with increasing technological advances. We model a tripartite system inspired by the marine symbiotic relationship between the alga \emph{Bryopsis} sp., its intracellular defensive bacterial symbiont ``\emph{Candidatus} Endobryopsis kahalalidefaciens", which produces a toxin that protects the alga against fish herbivores, and the sea-slug \emph{Elysia rufescens} \citep{zan2019microbial}, which is not deterred by the toxin. We disentangle the role of selection on different actors within this system by investigating evolutionary scenarios where defense evolves as i) a host-controlled trait that reduces algal reproductive ability; ii) a symbiont-controlled trait that impacts symbiont transmission; and iii) a trait jointly controlled by both host and symbiont. Optimal investment in defensive toxins varies based on the characteristics of the host, symbiont, and sea slug; and evolutionary trajectories are modulated by trade-off shape, i.e., a strongly decelerating trade-off between defense and symbiont transmission can drive symbiont diversification via evolutionary branching. Increasing slug herbivory reduces host investment in defense to favour reproduction, while symbiont investment in defense first declines and then increases as host density declines to the degree that horizontal symbiont transmission is no longer beneficial. Increasing vertical transmission selects for reduced defense by the host when it evolves as a jointly controlled trait, as a result of investment by the symbiont. Our theoretical exploration of the evolution of defensive symbiosis in scenarios involving interactions with multiple herbivores provides a first window onto the origin and maintenance of the \emph{Bryopsis} sp. system, and adds another piece to the puzzle of evolution of symbiotic systems.
DOI: 10.60712/si-id53533.1
title: StrainInfo SI-ID 53533.1

description: StrainInfo dataset 53533 about a strain of Escherichia coli. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53534.1
title: StrainInfo SI-ID 53534.1

description: StrainInfo dataset 53534 about a strain of Enterococcus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53535.1
title: StrainInfo SI-ID 53535.1

description: StrainInfo dataset 53535 about a strain of Enterococcus cecorum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53628.1
title: StrainInfo SI-ID 53628.1

description: StrainInfo dataset 53628 about a strain of Enterococcus hirae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53629.1
title: StrainInfo SI-ID 53629.1

description: StrainInfo dataset 53629 about a strain of Enterococcus hirae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53630.1
title: StrainInfo SI-ID 53630.1

description: StrainInfo dataset 53630 about a strain of Enterococcus hirae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53481.1
title: StrainInfo SI-ID 53481.1

description: StrainInfo dataset 53481 about a strain of Enterobacter roggenkampii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53482.1
title: StrainInfo SI-ID 53482.1

description: StrainInfo dataset 53482 about a strain of Enterobacter cloacae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53483.1
title: StrainInfo SI-ID 53483.1

description: StrainInfo dataset 53483 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53536.1
title: StrainInfo SI-ID 53536.1

description: StrainInfo dataset 53536 about a strain of Enterococcus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53537.1
title: StrainInfo SI-ID 53537.1

description: StrainInfo dataset 53537 about a strain of Enterococcus casseliflavus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53538.1
title: StrainInfo SI-ID 53538.1

description: StrainInfo dataset 53538 about a strain of Enterococcus casseliflavus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53539.1
title: StrainInfo SI-ID 53539.1

description: StrainInfo dataset 53539 about a strain of Enterococcus casseliflavus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53631.1
title: StrainInfo SI-ID 53631.1

description: StrainInfo dataset 53631 about a strain of Enterococcus malodoratus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53632.1
title: StrainInfo SI-ID 53632.1

description: StrainInfo dataset 53632 about a strain of Enterococcus mundtii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53633.1
title: StrainInfo SI-ID 53633.1

description: StrainInfo dataset 53633 about a strain of Enterococcus casseliflavus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53484.1
title: StrainInfo SI-ID 53484.1

description: StrainInfo dataset 53484 about a strain of Enterobacter cloacae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53634.1
title: StrainInfo SI-ID 53634.1

description: StrainInfo dataset 53634 about a strain of Enterococcus pseudoavium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53485.1
title: StrainInfo SI-ID 53485.1

description: StrainInfo dataset 53485 about a strain of Enterobacter cloacae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53486.1
title: StrainInfo SI-ID 53486.1

description: StrainInfo dataset 53486 about a strain of Enterobacter cloacae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53487.1
title: StrainInfo SI-ID 53487.1

description: StrainInfo dataset 53487 about a strain of Enterobacter hormaechei. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53488.1
title: StrainInfo SI-ID 53488.1

description: StrainInfo dataset 53488 about a strain of Enterobacter cloacae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53540.1
title: StrainInfo SI-ID 53540.1

description: StrainInfo dataset 53540 about a strain of Enterococcus casseliflavus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53541.1
title: StrainInfo SI-ID 53541.1

description: StrainInfo dataset 53541 about a strain of Enterococcus casseliflavus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53542.1
title: StrainInfo SI-ID 53542.1

description: StrainInfo dataset 53542 about a strain of Enterococcus casseliflavus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53543.1
title: StrainInfo SI-ID 53543.1

description: StrainInfo dataset 53543 about a strain of Enterococcus casseliflavus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53635.1
title: StrainInfo SI-ID 53635.1

description: StrainInfo dataset 53635 about a strain of Enterococcus pseudoavium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53636.1
title: StrainInfo SI-ID 53636.1

description: StrainInfo dataset 53636 about a strain of Enterococcus pseudoavium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53638.1
title: StrainInfo SI-ID 53638.1

description: StrainInfo dataset 53638 about a strain of Lactococcus garvieae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53489.1
title: StrainInfo SI-ID 53489.1

description: StrainInfo dataset 53489 about a strain of Enterobacter cloacae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53639.1
title: StrainInfo SI-ID 53639.1

description: StrainInfo dataset 53639 about a strain of Epidermophyton floccosum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53490.1
title: StrainInfo SI-ID 53490.1

description: StrainInfo dataset 53490 about a strain of Enterobacter hormaechei subsp. steigerwaltii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53491.1
title: StrainInfo SI-ID 53491.1

description: StrainInfo dataset 53491 about a strain of Enterobacter hormaechei subsp. steigerwaltii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53544.1
title: StrainInfo SI-ID 53544.1

description: StrainInfo dataset 53544 about a strain of Enterococcus cecorum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53545.1
title: StrainInfo SI-ID 53545.1

description: StrainInfo dataset 53545 about a strain of Enterococcus faecium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53546.1
title: StrainInfo SI-ID 53546.1

description: StrainInfo dataset 53546 about a strain of Enterococcus cecorum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53547.1
title: StrainInfo SI-ID 53547.1

description: StrainInfo dataset 53547 about a strain of Enterococcus cecorum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53640.1
title: StrainInfo SI-ID 53640.1

description: StrainInfo dataset 53640 about a strain of Erysipelothrix rhusiopathiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53641.1
title: StrainInfo SI-ID 53641.1

description: StrainInfo dataset 53641 about a strain of Erysipelothrix rhusiopathiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53642.1
title: StrainInfo SI-ID 53642.1

description: StrainInfo dataset 53642 about a strain of Erysipelothrix rhusiopathiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53643.1
title: StrainInfo SI-ID 53643.1

description: StrainInfo dataset 53643 about a strain of Erysipelothrix rhusiopathiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53492.1
title: StrainInfo SI-ID 53492.1

description: StrainInfo dataset 53492 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53493.1
title: StrainInfo SI-ID 53493.1

description: StrainInfo dataset 53493 about a strain of Pluralibacter gergoviae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53494.1
title: StrainInfo SI-ID 53494.1

description: StrainInfo dataset 53494 about a strain of Pluralibacter gergoviae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53495.1
title: StrainInfo SI-ID 53495.1

description: StrainInfo dataset 53495 about a strain of Pluralibacter gergoviae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53548.1
title: StrainInfo SI-ID 53548.1

description: StrainInfo dataset 53548 about a strain of Enterococcus columbae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53549.1
title: StrainInfo SI-ID 53549.1

description: StrainInfo dataset 53549 about a strain of Enterococcus columbae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53550.1
title: StrainInfo SI-ID 53550.1

description: StrainInfo dataset 53550 about a strain of Enterococcus columbae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53551.1
title: StrainInfo SI-ID 53551.1

description: StrainInfo dataset 53551 about a strain of Enterococcus columbae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53644.1
title: StrainInfo SI-ID 53644.1

description: StrainInfo dataset 53644 about a strain of Erysipelothrix rhusiopathiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53645.1
title: StrainInfo SI-ID 53645.1

description: StrainInfo dataset 53645 about a strain of Erysipelothrix rhusiopathiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53646.1
title: StrainInfo SI-ID 53646.1

description: StrainInfo dataset 53646 about a strain of Erysipelothrix rhusiopathiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id53647.1
title: StrainInfo SI-ID 53647.1

description: StrainInfo dataset 53647 about a strain of Erysipelothrix rhusiopathiae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.