cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.18399095
title: Moderate Electrical Muscle Stimulation During Voluntary Movement Does Not Disrupt the Sense of Agency or Ownership
DOI: 10.15468/dl.me93cf
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bolbosoma turbinella",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004556-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ryhnbj
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Maraniona lavinii",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 42 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004557-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.31175437
title: <b>DINÂMICAS TEMPORAIS E ESPACIAIS DA MORTALIDADE POR DOENÇAS CEREBROVASCULARES EM PESSOAS IDOSAS NO BRASIL, 2008-2022</b>

description: Objetivo: analisar o perfil epidemiológico e a dinâmica temporal e espacial da mortalidade por doenças cerebrovasculares em pessoas idosas no Brasil. Método: estudo ecológico, de tendência temporal e análise espacial. Os dados foram coletados no Sistema de Informações de Mortalidade do Departamento de Informática do SUS, no período de 2008 a 2022. Utilizada a doença cerebrovascular como causa básica de óbito. Para a análise da tendência temporal, adotaram-se as regiões brasileiras como unidades de análise. Na análise espacial considerou-se os municípios brasileiros como unidades geográficas. Resultados: registrados 1.233.337 óbitos por doenças cerebrovasculares em pessoas idosas, entre 2008 e 2022, correspondendo a taxa de mortalidade de 328,386 por 100 mil habitantes. Houve predominância entre indivíduos com 80 anos ou mais (45,12%), raça/cor branca (52,45%) e baixa escolaridade, concentrando-se entre aqueles com nenhum (24,39%) ou entre um e três anos de estudo (25,84%). Identificou-se tendência temporal de redução da mortalidade em todas as regiões do país, embora os valores permaneçam elevados. A análise espacial evidenciou distribuição heterogênea da mortalidade, com predominância de aglomerados de alta mortalidade nas regiões Nordeste e Sul, além de clusters mais pontuais na Região Norte. Conclusão: No Brasil, observou-se uma tendência temporal decrescente na mortalidade por doenças cerebrovasculares entre pessoas idosas, apesar da persistência de altas taxas. A presença de aglomerados espaciais de alta mortalidade, especialmente nas regiões Nordeste e Sul, reflete as desigualdades estruturais, regionais e socioeconômicas que caracterizam o país, reforçando a necessidade de políticas públicas sensíveis às especificidades territoriais e às iniquidades em saúde.
DOI: 10.6084/m9.figshare.31175437.v1
title: <b>DINÂMICAS TEMPORAIS E ESPACIAIS DA MORTALIDADE POR DOENÇAS CEREBROVASCULARES EM PESSOAS IDOSAS NO BRASIL, 2008-2022</b>

description: Objetivo: analisar o perfil epidemiológico e a dinâmica temporal e espacial da mortalidade por doenças cerebrovasculares em pessoas idosas no Brasil. Método: estudo ecológico, de tendência temporal e análise espacial. Os dados foram coletados no Sistema de Informações de Mortalidade do Departamento de Informática do SUS, no período de 2008 a 2022. Utilizada a doença cerebrovascular como causa básica de óbito. Para a análise da tendência temporal, adotaram-se as regiões brasileiras como unidades de análise. Na análise espacial considerou-se os municípios brasileiros como unidades geográficas. Resultados: registrados 1.233.337 óbitos por doenças cerebrovasculares em pessoas idosas, entre 2008 e 2022, correspondendo a taxa de mortalidade de 328,386 por 100 mil habitantes. Houve predominância entre indivíduos com 80 anos ou mais (45,12%), raça/cor branca (52,45%) e baixa escolaridade, concentrando-se entre aqueles com nenhum (24,39%) ou entre um e três anos de estudo (25,84%). Identificou-se tendência temporal de redução da mortalidade em todas as regiões do país, embora os valores permaneçam elevados. A análise espacial evidenciou distribuição heterogênea da mortalidade, com predominância de aglomerados de alta mortalidade nas regiões Nordeste e Sul, além de clusters mais pontuais na Região Norte. Conclusão: No Brasil, observou-se uma tendência temporal decrescente na mortalidade por doenças cerebrovasculares entre pessoas idosas, apesar da persistência de altas taxas. A presença de aglomerados espaciais de alta mortalidade, especialmente nas regiões Nordeste e Sul, reflete as desigualdades estruturais, regionais e socioeconômicas que caracterizam o país, reforçando a necessidade de políticas públicas sensíveis às especificidades territoriais e às iniquidades em saúde.
DOI: 10.15468/dl.nz6tvu
title: Occurrence Download

description: A dataset containing 50 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Perca fluviatilis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1890",
 "Year is less than or equal to 1894"
 ]
}

 The dataset includes 50 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004558-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18408360
title: Engineering stable and efficient ketol-acid reductoisomerases for industrial biotransformations using ancestral sequence reconstruction - Supplementary data
DOI: 10.5281/zenodo.18408361
title: Engineering stable and efficient ketol-acid reductoisomerases for industrial biotransformations using ancestral sequence reconstruction - Supplementary data
DOI: 10.5061/dryad.vt4b8gv5x
title: <i>MSH3</i> is a genetic modifier of somatic repeat instability in X-linked dystonia parkinsonism

description: Abstract X-linked dystonia parkinsonism (XDP) is a progressive adult-onset
 neurogenerative disorder caused by the insertion of a SINE-VNTR-Alu (SVA)
 retrotransposon inTAF1gene. One element of the SVA is a tandem polymorphic
 CCCTCT repeat tract whose length inversely correlates with the age of
 disease onset. Previous observations that the repeat exhibits
 length-dependent somatic expansion and that XDP onset is modified by
 variation in DNA repair geneMSH3indicated that somatic repeat expansion is
 an important disease driver. Here, we sought to uncover genetic modifiers
 of CCCTCT instability in XDP patients and to provide a mechanistic link
 between somatic instability and disease. We determined quantitative
 metrics of both repeat expansion and repeat contraction in blood. Using
 genetic association analyses of exome sequencing data, as well as directed
 sequencing of a variantMSH3repeat, we found thatMSH3modifies repeat
 expansion and contraction in blood as well as age at onset.MSH3alleles
 associated with earlier disease onset were associated with more expansion
 and less contraction. Conversely, alleles associated with later disease
 onset were associated with less expansion and more contraction.
 Notably,MSH3repeat alleles were also similarly associated with expansion
 and contraction in brain tissues. Our findings provide key evidence that
 MSH3’s role(s) in CCCTCT repeat dynamics underlies its impact on clinical
 disease and indicate that therapeutic strategies to lower or inhibit MSH3
 are predicted to both slow CCCTCT expansion and promote CCCTCT
 contraction, impacting the disease course prior to clinical onset.
description: # *MSH3* is a genetic modifier of somatic repeat instability in X-linked
 dystonia parkinsonism Dataset DOI:
 [10.5061/dryad.vt4b8gv5x](https://doi.org/10.5061/dryad.vt4b8gv5x) ##
 Description of the data and file structure These dataset correspond to the
 Exome association studies (ExWAS) performed for the study: MSH3 is a
 genetic modifier of somatic repeat instability in X-linked dystonia
 parkinsonism ### Files and variables #### File: AAO_Pre_ALL.csv
 **Description:**  ##### Variables * : * chr: chromosome * rs: rsiD * ps:
 position(GRCh37) * n_miss: * allele1: * allele0: * af: * beta: * se: *
 logl_H1: * l_remle: * p_wald: * logp: #### File: Contraction_Pre_ALL.csv
 **Description:**  ##### Variables * : * chr: * rs: * ps: * n_miss: *
 allele1: * allele0: * af: * beta: * se: * logl_H1: * l_remle: * p_wald: *
 logp: #### File: Expansion_Pre_ALL.csv **Description:**  ##### Variables *
 : * chr: * rs: * ps: * n_miss: * allele1: * allele0: * af: * beta: * se: *
 logl_H1: * l_remle: * p_wald: * logp:
DOI: 10.5061/dryad.2z34tmq0q
title: New Mexico heat index by ZIP code 2016-2022

description: This dataset was produced for an epidemiological study of wildfire smoke
 exposure and emergency department visits. The heat index data was used as
 a cofounding variable. It is population-weighted by ZIP Code.
description: # New Mexico heat index by ZIP code 2016-2022 Dataset DOI:
 [10.5061/dryad.2z34tmq0q](https://doi.org/10.5061/dryad.2z34tmq0q) ##
 Description of the data and file structure The daily maximum heat index
 was calculated using 4 x 4 km daily PRISM data
 ([https://prism.oregonstate.edu/](https://prism.oregonstate.edu/)), which
 was averaged to ZIP-code level and population-weighted using NASA
 Socioeconomic Data and Applications Center (SEDAC) gridded world
 population (GPWv4).  ### Files and variables #### File: MaxPop_HI_OS.csv
 **Description:**  ##### Variables * Zip: New Mexico ZIP code  * Date: Date
 (M/D/YY) * maxpopHI: maximum heat index value (degrees Fahrenheit)  ##
 Access information Data was derived from the following sources: * PRISM
 data ([https://prism.oregonstate.edu/](https://prism.oregonstate.edu/)) *
 NASA Socioeconomic Data and Applications Center (SEDAC) gridded world
 population (GPWv4)
DOI: 10.15468/dl.69zay7
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bolbosoma balaenae",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004559-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.2280gb663
title: Data from: Multi-omics insights into environmental adaptation and invasion potential of the ascidian <em>Molgula manhattensis</em>

description: Global climate change interacts in complex ways with biological invasions,
 yet the mechanisms enabling invasive species to maintain adaptive capacity
 under changing conditions remain poorly understood. In particular, the
 relative and interactive roles of genetic and epigenetic variations in
 mediating environmental adaptation, and their joint influence on future
 invasion risks, are unresolved. Here, we integrated population
 (epi)genomics and predictive modeling to investigate the molecular basis
 of environmental adaptation in the globally invasive ascidian Molgula
 manhattensis. Using the genomic and methylomic sequencing across five
 populations along the Chinese coastline, we detected strong north-south
 population divergence at both genetic and epigenetic levels, accompanied
 by extensive environment-associated genomic and epigenomic variations.
 Mantel tests and methylation quantitative trait locus (mQTL) analyses
 revealed weak genomic-epigenomic coupling, with genetic variation
 explaining only 34.42 % of environment-associated methylation variation,
 indicating largely autonomous epigenetic regulation. Functional analyses
 showed that genetic and epigenetic variations were linked to both
 overlapping and unique sets of genes and biological pathways, suggesting
 functional complementarity between the two layers of variations.
 Generalized dissimilarity modeling further revealed pronounced spatial
 heterogeneity in genomic and epigenomic offsets, with southern populations
 exhibiting lower offsets and thus potentially greater adaptive potential
 and higher invasion risks than northern populations under future climate
 scenarios. Collectively, this study advances our mechanistic understanding
 of invasion dynamics and underscores the importance of incorporating
 multi-omics information into frameworks for predicting invasion risks and
 managing biological invasions under global climate change.
description: # Multi-omics insights into environmental adaptation and invasion
 potential of the ascidian *Molgula manhattensis* Dataset DOI:
 [10.5061/dryad.2280gb663](https://doi.org/10.5061/dryad.2280gb663) ##
 Description of the data and file structure We collected a total of 55
 adult individuals from five geographically distinct sites of *M.
 manhattensis* along the Chinese coastline. We conducted genomic and
 methylomic sequencing across these samples.  ### Files and variables ####
 File: SNP.vcf **Description:** The SNP file of all samples. #### File:
 20811RPM.txt **Description:** The DNA methylation file of all samples.
DOI: 10.5061/dryad.jm63xsjqj
title: A new species from an inselberg in the Brazilian Atlantic Forest: <em>Stachytarpheta forzzae</em> (Verbenaceae), supported by morphological, palynological, and anatomical evidence

description: We describe Stachytarpheta forzzae, a new species from an inselberg
 located in the municipality of Guaratinga, state of Bahia, within the
 Brazilian Atlantic Forest. Morphologically, it resembles S. sprucei, the
 only other species of the genus known to inhabit inselbergs. Both species
 share winged branches, petiolate leaves, 4-toothed calyces, and blue
 corollas. However, S. forzzae can be distinguished by its sparsely
 strigose branches, leaf blades with abundant capitate glandular trichomes,
 sparsely strigose along the veins, wider and oblanceolate bracts, with the
 basal third fused to the calyx tubes, acuminate or cuspidate at apex, and
 calyces densely minutely strigose on the inner surface. Importantly, the
 presence of fused bracts to the calyx tubes is recorded for the first time
 within the genus, representing a diagnostic trait of the new species.
 Furthermore, differences in trichome structure, especially the number of
 cells in both glandular and non-glandular types, and in the pollen grain
 margin, provide additional evidence supporting the separation of these two
 species. Known from just a single collection record, Stachytarpheta
 forzzae is assessed as Critically Endangered due to anthropogenic
 pressures on its habitat, the Pedra do Oratório inselberg. It is
 noteworthy that the discovery of this new species stemmed from an initial
 record on iNaturalist, underscoring the increasing relevance of citizen
 science platforms in biodiversity research and conservation.
description: # A new species from an inselberg in the Brazilian Atlantic Forest:
 *Stachytarpheta forzzae* (Verbenaceae), supported by morphological,
 palynological, and anatomical evidence Dataset DOI:
 [10.5061/dryad.jm63xsjqj](https://doi.org/10.5061/dryad.jm63xsjqj) ##
 Description of the data and file structure Morphometric data of
 *Stachytarpheta forzzae* (Stachytarpheta_forzzae.csv) and *S. sprucei*
 (Stachytarpheta_sprucei.csv). ### Files and variables P: polar diameter
 (equatorial view); E: equatorial diameter (equatorial view); DM: largest
 diameter (polar view) - (in micrometers). ### Software software PAST -
 Hammer, Ø., & Harper, D. A. (2001). Past: paleontological statistics
 software package for educaton and data anlysis. *Palaeontologia
 electronica*, *4*(1), 1.
DOI: 10.15468/dl.pt8rr5
title: Occurrence Download

description: A dataset containing 1515 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Marina parryi",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 1515 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004560-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.s4mw6m9kn
title: Data from: LAR1 activates NF-κB signaling pathway by binding to APOC1 mRNA and enhancing its expression: A novel mechanism underlying breast carcinogenesis

description: The transcriptomic changes induced by LAR1 overexpression was profiled
 using mRNA sequencing on LAR1-overexpressing MDA-MB-231 cells and vector
 controls. DEGs were defined as those with a |Log2FC| &gt; 1.5 and a p
 value &lt; 0.01. To distinguish direct targets of LAR1, we intersected
 these DEGs with a previously published LAR1-mRNA interactome dataset
 generated by RNA immunoprecipitation and microarray profiling (RIP-CHIP).
description: # Data from: LAR1 activates NF-κB signaling pathway by binding to APOC1
 mRNA and enhancing its expression: A novel mechanism underlying breast
 carcinogenesis Dataset DOI:
 [10.5061/dryad.s4mw6m9kn](https://doi.org/10.5061/dryad.s4mw6m9kn) ##
 Description of the data and file structure RNA immunoprecipitation and
 microarray profiling (RIP-CHIP) follows Mura et al., 2015. Mura M.,
 Hopkins T.G., Michael T., Abd-Latip N., Weir J., Aboagye E., Mauri F.,
 Jameson C., Sturge J., Gabra H., Bushell M., Willis A.E., Curry E.,
 Blagden S.P., 2015. LARP1 post-transcriptionally regulates mTOR and
 contributes to cancer progression. Oncogene 34(39):5025-36. ### Files and
 variables #### File: Shared_genes-Down.xlsx **Description:** The shared
 genes between downregulated DEGs of mRNA-sequencing from MDA-MB-231 cells
 (Lv-LAR1 vs Lv-Vector) and the previously published LAR1-mRNA interactome
 ([https://doi.org/10.1038/onc.2014.428](https://doi.org/10.1038/onc.2014.428)). #### File: Shared_genes-Up.xlsx **Description:** The shared genes between upregulated DEGs of mRNA-sequencing from MDA-MB-231 cells (Lv-LAR1 vs Lv-Vector) and the previously published LAR1-mRNA interactome ([https://doi.org/10.1038/onc.2014.428](https://doi.org/10.1038/onc.2014.428)).
DOI: 10.15468/dl.rd3qgq
title: Occurrence Download

description: A dataset containing 4696 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Perca fluviatilis",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1895",
 "Year is less than or equal to 1899"
 ]
}

 The dataset includes 4696 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004561-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qe65gf
title: Occurrence Download

description: A dataset containing 1759 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (, , , , , , , , Dociostaurus maroccanus, , , , , , , , , , , , , , , , , , Cytherea obscura, , Spogostylum isis, , , , , , , , , , , , , , , , , , Dociostaurus xanthocnema, , , , , , Stauronotus maroccanus, Oedipoda vastator, Gryllus maroccanus, , , , Gryllus cruciatus, Dociostaurus degeneratus, , , Acridium cruciatus, Epacromia oceanica, , )",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1759 records from 133 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004562-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ydqwew
title: Occurrence Download

description: A dataset containing 359 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Hong Kong, Macao)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Vanellus vanellus",
 "Year 2020-2025"
 ]
}

 The dataset includes 359 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025465-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.df9y7u
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Discogobio multilineatus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025466-250811113504898/datasets/export for details.
DOI: 10.6084/m9.figshare.3551073.v1
title: Appendix A. Calculating the weighted-predictions matrix of loop analysis.

description: Calculating the weighted-predictions matrix of loop analysis.
DOI: 10.6084/m9.figshare.23790285.v1
title: Supplementary Material for: Social health and change in cognitive capability among older adults: findings from four European longitudinal studies

description: Introduction: In this study we examine whether social health markers measured at baseline are associated with differences in cognitive capability and in the rate of cognitive decline over an 11-to-18-year period among older adults and compare results across studies. Methods: We applied an integrated data analysis approach to 16,858 participants (mean age 65 years; 56% female) from the National Survey for Health and Development (NSHD), the English Longitudinal Study of Aging (ELSA), the Swedish National Study on Aging and Care in Kungsholmen (SNAC-K), and the Rotterdam Study. We used multilevel models to examine social health in relation to cognitive capability and the rate of cognitive decline. Results: Pooled estimates show distinct relationships between markers of social health and cognitive domains e.g., a large network size (≥6 people vs none) was associated with higher executive function (0.17 SD[95%CI:0.0, 0.34], I2=27%) but not with memory (0.08 SD[95%CI: -0.02, 0.18], I2=19%). We also observed pooled associations between being married or cohabiting, having a large network size and participating in social activities with slower decline in cognitive capability, however estimates were close to zero e.g., 0.01SD/year [95%CI: 0.01 to 0.02] I2=19% for marital status and executive function. There were clear study-specific differences: results for average processing speed were the most homogenous and results for average memory were the most heterogenous. Conclusion: Overall, markers of good social health have a positive association with cognitive capability. However, we found differential associations between specific markers of social health and cognitive domains and differences between studies. These findings highlight the importance of examining between study differences and considering context specificity of findings in developing and deploying any interventions
DOI: 10.6084/m9.figshare.27135810.v1
title: Supplemental Files Raff HPA Pilots Submit

description: Supplemental Tables 1-4 showing individual data and statistics from study.
DOI: 10.6084/m9.figshare.5759508.v1
title: Partition flie of PCGs by IQ-TREE

description: Partition flie of PCGs by IQ-TREE