cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14447532.v1
title: Supplementary Material for: Utility of True Fast Imaging with Steady-State Precession in Detecting Arachnoid Veils of the Posterior Fossa

description: <b><i>Introduction:</i></b> Arachnoid membranes are well recognized as a cause of cerebrospinal fluid (CSF) flow impairment in disorders such as obstructive hydrocephalus and syringohydromyelia, but can be difficult to detect with standard noninvasive imaging techniques. True fast imaging with steady-state precession (TrueFISP) can exhibit brain pulsations and CSF dynamics with high spatiotemporal resolution. Here, we demonstrate the utility of this technique in the diagnosis and management of arachnoid membranes in the posterior fossa. <b><i>Case Presentations:</i></b> Three symptomatic children underwent cine TrueFISP imaging for suspicion of CSF membranous obstruction. Whereas standard imaging failed to or did not clearly visualize the site of an obstructive lesion, preoperative TrueFISP identified a membrane in all 3 cases. The membranes were confirmed intraoperatively, and postoperative TrueFISP helped verify adequate marsupialization and recommunication of CSF flow. Two out of the 3 cases showed a decrease in cerebellar tonsillar pulsatility following surgery. All children showed symptomatic improvement. <b><i>Conclusion:</i></b> TrueFISP is able to detect pulsatile arachnoid membranes responsible for CSF outflow obstruction that are otherwise difficult to visualize using standard imaging techniques. We advocate use of this technology in pre- and postsurgical decision-making as it provides a more representative image of posterior fossa pathology and contributes to our understanding of CSF flow dynamics. There is potential to use this technology to establish prognostic biomarkers for disorders of CSF hydrodynamics.
DOI: 10.6084/m9.figshare.12950826.v1
title: Data table from Morphological convergence obscures functional diversity in sabre-toothed carnivores

description: The acquisition of elongated, sabre-like canines in multiple vertebrate clades during the last 265 Myr represents a remarkable example for convergent evolution. Due to striking superficial similarities in the cranial skeleton, the same or similar skull and jaw functions have been inferred for sabre-toothed species and interpreted as an adaptation to subdue large-bodied prey. However, although some sabre-tooth lineages have been classified into different ecomorphs (dirk-tooths and scimitar-tooths) the functional diversity within and between groups and the evolutionary paths leading to these specializations are unknown. Here, we use a suite of biomechanical simulations to analyse key functional parameters (mandibular gape angle, bending strength, bite force) to compare the functional performance of different groups and to quantify evolutionary rates across sabre-tooth vertebrates. Our results demonstrate a remarkably high functional diversity between sabre-tooth lineages and that cranial function and prey killing strategies evolved within clades. Moreover, different biomechanical adaptations in coexisting sabre-tooth species further suggest that this functional diversity was at least partially driven by niche-partitioning.
DOI: 10.6084/m9.figshare.24081618.v1
title: CRISPR-Cas9 knockout screens using the miRNA-targeting lentiG-miR library

description: The data includes NGS data analyses from CRISPR-Cas9 knockout screens for 47 human cancer cell lines, performed with PoolQ (v2.2.0). This output includes raw read counts of sgRNAs and corresponding quality metrics.
DOI: 10.6084/m9.figshare.12521945.v1
title: Landsat-spectral-signature-WATER

description: Water spectral signature from USGS Spectral Library Version 7 - questionable whether or not useful to this workflow!<br><br>Kokaly, R.F., Clark, R.N., Swayze, G.A., Livo, K.E., Hoefen, T.M., Pearson, N.C., Wise, R.A., Benzel, W.M., Lowers, H.A., Driscoll, R.L., and Klein, A.J., 2017, USGS Spectral Library Version 7: U.S. Geological Survey Data Series 1035, 61 p., https://doi.org/10.3133/ds1035.
DOI: 10.6084/m9.figshare.22819511.v1
title: CONUS_Variables_HUC12.zip

description: HUC12 based hydrological variables on CONUS
DOI: 10.6084/m9.figshare.28787834.v1
title: BSCCO - 4mm - TXT data files

description: Experimental tests were carried out to measure the AC losses of BSCCO tapes with 4mm wide. The used experimental setup comprises a sinusoidal voltage source (Keysight AC6804B) connected to a step-down transformer, with the secondary connected to the HTS tapes. Voltage taps are soldered to both sides of the HTS tape sample. A cancellation coil is employed to align the tape’s voltage and current, thereby reducing errors in computing the active power. The voltage signal undergoes an 80-fold amplification stage in the Low Noise Amplifier (LNA) before being visualized and acquired by an oscilloscope. For each current step, a 5-period signal is acquired 20 times, from which an average 5-period signal is derived. Each measurement step is repeated five times to mitigate noise. From these tests, AC voltage-current (V-I) characteristics and total AC losses are experimentally determined. In addition to the cancelation coil method, the voltage was also measured using a Lock-in amplifier, using the current as a phase reference.
DOI: 10.6084/m9.figshare.23815971.v2
title: blue shark occurrences, oceanographic data, and SDM R code for predicting seasonal distributions in the cold and warm seasons in the Indo-Western Pacific

description: This file includes original datasets for predicting blue sharks' seasonal distributions across the Indo-Western Pacific Ocean based on open-access data and advanced ensemble SDMs. They were used in a manuscript that will be published later.
DOI: 10.6084/m9.figshare.1632771.v1
title: An exceptionally well preserved new species of ostracod (Crustacea) with soft parts in Baltic amber

description: A well-preserved ostracod in Baltic amber has been analysed with noninvasive methods by synchrotron radiation. A micro-tomographic image stack was prepared. The appendages are visualised as images and drawings are based on photographs of different images planes provided. The result is a description of a new species, <i>Cypria kempfi</i>, from the Eocene of Northern Germany. The way the fossilisation of this aquatic animal may have occurred is discussed. The possible ecological preferences of the species are considered.
DOI: 10.6084/m9.figshare.21793193.v1
title: 1-2

description: code
DOI: 10.6084/m9.figshare.27953373.v1
title: Function enrichment of IM and AG genomes

description: Annotations for IM and AG proteins as well as their enrichment in either group. Created using Anvi'o.
DOI: 10.6084/m9.figshare.5129827.v1
title: Supplementary Material for: How Not to Be Misled by Disorders Mimicking Angioedema: A Review of Pseudoangioedema

description: <b><i>Background:</i></b> Angioedema is a vascular reaction involving the lower dermis, subcutis and/or submucosal tissue and causing a temporary localized swelling in any part of the body. For many health care professionals, the diagnosis presents an ongoing challenge; several disorders may manifest with subcutaneous or submucosal swelling and falsely be assumed to be angioedema. The clinicians at the emergency department and in the immunology/allergy clinics must be skilled at recognizing the features of angioedema and its differential diagnosis. <b><i>Methods:</i></b> The review is based on a literature search with specific indexing terms in PubMed, a review of bibliographies and the authors' clinical experience. <b><i>Results:</i></b> The most essential diseases that mimic angioedema, the so-called pseudoangioedemas, will each be discussed and illustrated by clinical photos, pointing out key features that help clarify the diagnoses and differentiate these from classic angioedema. <b><i>Conclusions:</i></b> A variety of dermatologic conditions can cause swelling that resembles angioedema, some with a potentially fatal outcome if misdiagnosed. Knowledge of pseudoangioedema is fundamental in the emergency setting when handling patients with edema and should be kept in mind when assessing an atypical angioedema case.
DOI: 10.6084/m9.figshare.1406984.v2
title: Hemispheric asymmetries in repetition enhancement and suppression effects in the newborn brain

description: Raw data for PONE-D-14-28355R1 This figshare file contains the raw data underlying the study in the manuscript entitled "Hemispheric asymmetries in repetition enhancement and suppression effects in the newborn brain" sumitted to PlosOne by Bouchon, Nazzi and Gervain. Please find enclosed NIRS*.csv files corresponding to the individual NIRS data obtained for each participant in the study. The analysis of this dataset is described in the Data Analysis paragraph of our manuscript. In this study newborn participants were exposed to blocks of 6 CVCVCV words or stimuli: 12 adjacent blocks corresponded to the ABC condition, and 12 adjacent blocks to the ABB condition. Importantly the stimulus type, ABB or ABC, is indicated in the column entitled "Mark", with a mark for the onset and the offset of each word, using the following code: For ABC blocks: 4: onset of the 1st stimulus=block onset 4: offset of the 1st stimulus 1: onset of 2nd stimulus 1: offset of 2nd stimulus 1: onset of 3rd stimulus 1: offset of 3rd stimulus 1: onset of 4th stimulus 1: offset of 4th stimulus 1: onset of 5th stimulus 1: offset of 5th stimulus 5 onset of 6th and last stimulus 5 offset of 6th and last stimulus=end of block. For ABB blocks: 6: onset of 1st stimulus=block onset, 6: offset of 1st stimulus, 2: onset of 2nd stimulus, 2: offset of 2nd stimulus, 2: onset of 3rd stimulus, 2: offset of 3rd stimulus, 2: onset of 4th stimulus, 2: offset of 4th stimulus, 2: onset of 5th stimulus, 2: offset of 5th stimulus, 7: onset of 6th and last stimulus, 7: offset of 6th and last stimulus=end of block.
DOI: 10.6084/m9.figshare.24204936.v1
title: Focus group discussions with people living with atrial fibrillation in Brazil

description: English transcripts of three focus group discussions conducted in Sao Paulo Brazil with people diagnosed with atrial fibrillation.
DOI: 10.6084/m9.figshare.14494005.v1
title: Supplementary Material for: Trends in Peritoneal Dialysis Technique Survival, Death, and Transfer to Hemodialysis: A Decade of Data from the RDPLF

description: <b><i>Introduction:</i></b> There is limited information on the trends of peritoneal dialysis (PD) technique survival over time. This study aimed to estimate the effect of calendar time on technique survival, transfer to hemodialysis (HD) (and the individual causes of transfer), and patient survival. <b><i>Methods:</i></b> This retrospective, multicenter study, based on data from the French Language Peritoneal Dialysis Registry, analyzed 14,673 patients who initiated PD in France between January 1, 2005, and December 31, 2016. Adjusted Cox regressions with robust variance were used to examine the probability of a composite end point of either death or transfer to HD, death, and transfer to HD, accounting for the nonlinear impact of PD start time. <b><i>Results:</i></b> There were 10,201 (69.5%) cases of PD cessation over the study period: 5,495 (37.4%) deaths and 4,706 (32.1%) transfers to HD. The rate of PD cessation due to death or transfer to HD decreased over time (PR 0.96, 95% CI: 0.95–0.97). Compared to 2009–2010, starting PD between 2005 and 2008 or 2011 and 2016 was strongly associated with a lower rate of transfer to HD (PR 0.88, 95% CI: 0.81–0.96, and PR 0.91, 95% CI: 0.84–0.99, respectively), mostly due to a decline in the rate of infection-related transfers to HD (PR 0.96, 95% CI: 0.94–0.98). <b><i>Conclusions:</i></b> Rates of the composite end point of either death or transfer to HD, death, and transfer to HD have decreased in recent decades. The decline in transfers to HD rates, observed since 2011, is mainly the result of a significant decline in infection-related transfers.
DOI: 10.6084/m9.figshare.25755999.v1
title: 巨型石斑鱼的基因组组装

description: This study presents a gapless assembly of the giant grouper genome
DOI: 10.6084/m9.figshare.28816382.v1
title: <b>Assessment of Ecological Environment Quality in the Qilian Mountain National Nature Reserve Based on a Modified Remote Sensing Ecological Index</b>

description: Ecological environment change are critical issue in global environmental protection research. Examining the spatiotemporal dynamics and underlying drivers of regional Ecological Environment Quality(EEQ) is fundamental for supporting the sustainable management of ecosystems. To evaluate the spatiotemporal dynamics of EEQ in the Qilian Mountain National Nature Reserve(QMNNR) from 1986 to 2023, this study constructed an Modified Remote Sensing Ecological Index(MRSEI) on the GEE and incorporated the PLUS model.
DOI: 10.6084/m9.figshare.3561912.v1
title: Appendix A. Spatial regression slope and r² values for each year from 1982 to 2006.

description: Spatial regression slope and r² values for each year from 1982 to 2006.
DOI: 10.6084/m9.figshare.7931084.v1
title: ACASS Database (N = 792)

description: This database accompanies the article "Introducing ACASS: An Annotated Character Animation Stimulus Set for Controlled (e)Motion Perception Studies" (doi.org/10.3389/frobt.2019.00094).<br><br>It contains 792 animations (AVI-files), one annotational data sheet (CSV-file) and one text-file (TXT-file) explaining the structure of the filenames.<br><br>Please refer to the original article for further information.<br>
DOI: 10.6084/m9.figshare.19236705.v1
title: Lithium niobate extracted parameters ANN.csv

description: Extracted data for Lithium Niobate with the ANN, NR and AN method compared. This is data corresponding to figure 5.
DOI: 10.6084/m9.figshare.95929.v1
title: Archive of FASTA-formatted files containing predicted proteins for each genome

description: A g-zipped archive with 347 text files containing the predicted proteins found by at least one of the gene finders Prodigal, Glimmer or GeneMarkHMM for each genome.
DOI: 10.6084/m9.figshare.4982930.v1
title: Supplementary Material for: Fetal and Postnatal Head Circumference Growth: Synergetic Factors for Neurodevelopmental Outcome at 2 Years of Age for Preterm Infants

description: <i>Abstract:</i> Preterm infants present higher risk of non-optimal neurodevelopmental outcome. Fetal and postnatal growth, in particular head circumference (HC), is associated with neurodevelopmental outcome. <i>Objectives:</i> We aimed to calculate the relationship between HC at birth, HC delta Z-score (between birth and hospital discharge), and non-optimal neurodevelopmental outcome at 2 years of corrected age in preterm infants. <i>Methods:</i> Surviving infants born ≤34 weeks of gestation were included in the analysis. The relationship between the risk of being non-optimal at 2 years and both HC at birth and HC growth was assessed. The 2 Z-scores were considered first independently and then simultaneously to investigate their effect on the risk of non-optimality using a generalized additive model. <i>Results:</i> A total of 4,046 infants with both HC measures at birth and hospital discharge were included. Infants with small HC at birth (Z-score 2) while adjusting for gestational age, twin status, sex, and socioeconomic information. <i>Conclusions:</i> HC at birth and HC dZ-score between birth and hospital discharge are synergistically associated to neurodevelopmental outcome at 2 years of corrected age, in a population-based prospective cohort of preterm infants born ≤34 weeks of gestation.
DOI: 10.26188/28691096.v1
title: Data for Ryan et al. (2025) - GBR Ship Emissions Study

description: Required information and files for running WRF-Chem simulations detailed in Ryan et al. (2025) - "Ship fuel sulfur content regulations may exacerbate mass coral bleaching events on the Great Barrier Reef". See "README" file within the repository for more information.
DOI: 10.6084/m9.figshare.14387468.v1
title: Assessment of Descriptors for UX Evaluation of AI-infused Products

description: Aiming at developing a UX evaluation method for AI-infused products, the researchers involved in the Meet-AI project assessed the descriptors emerging from an exploratory survey (you can find the reference at the following link: https://figshare.com/s/bf5a997e78afc351e02b) according to their (i) consistency with the dimension in which they were proposed, and to their (ii) relevance for AI-infused products. Items emerging from a previously undertaken literature review and mapping of the existing UX evaluation methods are also evaluated according to their relevance.In the dataset, the 1 to 4 evaluations by the involved researchers are displayed.
DOI: 10.6084/m9.figshare.19904954.v1
title: Multi-state outcome analysis of treatment interventions after failure of non-surgical root canal treatment: a 13-year retrospective study

description: Abstract Objective To examine the factors affecting the transitions through treatment interventions after failure of non-surgical root canal treatment (NS-RCT). Methodology Insurance enrollment and claim information for enrollees of Delta Dental of Wisconsin (DDWI), USA were analyzed for 438,487 initial NS-RCT procedures to determine the effect of initial provider type and other covariates on additional treatments (no additional treatment, nonsurgical retreatment, surgical retreatment and extraction). A multi-state model was created using the “mstate” R package. Transitions between the four states identified by Code on Dental Procedures and Nomenclature were analyzed. Cox proportional Hazards regression stratified by transition type was used to estimate the effect of provider type on the risk of each transition, adjusting for covariates. Results The overall survival rates for all teeth that were treated by NS-RCT was 82.8% [95% CI 82.57%, 83.11%] at 10 years. Approximately, 7% of cases changed from the first state of initial NS-RCT during the 13-year study period with ultimately 0.9%, 0.4% and 5% of cases receiving non-surgical retreatment, surgical retreatment or extraction, respectively. Teeth are more likely to be retreated non-surgically than surgically, and to be extracted than retreated. In general, the probability of a tooth having non-surgical retreatment was higher if the initial provider was not an endodontist (Hazard Ratio (HR)=3.2). Molars were more likely to be non-surgically retreated (HR=2.0) or extracted (HR=2.8) when compared to anterior teeth. The probability of non-surgical retreatment (HR=0.93) or extraction (HR=0.50) was lower when a crown was placed within 90 days after NS-RCT. Conclusion Most teeth remained in the same state after treatment with no additional treatment transitions. When a transition occurred, it was more likely to be an extraction. Type of provider, age, location of the tooth, gender, and time to placement of final restoration significantly influence treatment transitions.
DOI: 10.6084/m9.figshare.21890505.v1
title: cullingData_byYear_andSp.RDS

description: Irish deer culling returns by species 2000-2019
DOI: 10.6084/m9.figshare.3695136.v1
title: Supplementary Material for: Insights from the German Compassionate Use Program of Nintedanib for the Treatment of Idiopathic Pulmonary Fibrosis

description: <b><i>Background:</i></b> Nintedanib is approved for the treatment of idiopathic pulmonary fibrosis (IPF) and has been shown to slow disease progression by reducing annual lung function decline. <b><i>Objective:</i></b> To evaluate the results of a large cohort of IPF patients treated with nintedanib within a compassionate use program (CUP) in Germany (9 centers). <b><i>Methods:</i></b> Patients (≥40 years) were required to have a confirmed diagnosis of IPF, a forced vital capacity (FVC) ≥50% predicted (pred.) and a carbon monoxide diffusing capacity (DLCO) 30-79% pred. and not to be eligible for pirfenidone treatment. Clinical data, pulmonary function tests and adverse events were recorded up to July 2015. <b><i>Results:</i></b> Sixty-two patients (48 male/14 female) with moderate IPF (FVC 64 ± 17% pred. and DLCO 40 ± 10% pred.) were treated with nintedanib. 77% of patients switched from pirfenidone (mean treatment duration 14 ± 2 months) mostly due to disease progression (mean decline in FVC 7.4 ± 3% pred. in the 6 months prior to nintedanib intake). Initiation of nintedanib treatment occurred 69 ± 29 months after IPF diagnosis, and mean treatment duration was 8 ± 4 months. Most patients (63%) stabilized 6 months after treatment start (mean FVC decline 3 ± 1 vs. -17 ± 2% in patients with disease progression; p &lt; 0.01). The most common adverse events were diarrhea (63%) and weight loss (50%). Dose reduction occurred in 34% of cases and treatment discontinuation in 10%. <b><i>Conclusion:</i></b> Nintedanib treatment was generally well tolerated and was associated with FVC stabilization in the majority of IPF patients in this CUP setting where most patients were not treatment naïve. Our data are in agreement with the previously published data.
DOI: 10.6084/m9.figshare.1044154.v1
title: A COMPARATIVE STUDY ON CUSTOMER RELATIONSHIP MANAGEMENT STRATEGIES IN ORGANISED MULTI BRAND RETAIL APPARELS.

description: Customer relationship management (CRM) is a comprehensive strategy and process of<br>acquiring, retaining and parenting with selective customers to create superior value for the company and<br>the customers. The Indian Apparel Industry has an overwhelming presence in the economic life of the<br>country. The retail apparel industry can be broadly classified in to organised and un organised retail<br>apparel industry. The organised retail apparel industry can further be classified in to Exclusive Retail<br>outlets and Multi Brand Retail outlets. This article analyses the different players in organised retail<br>apparel industry and compares their strengths weakness opportunities and threats. This article compares<br>the CRM strategies followed in the various organised multi brand retail outlets.
DOI: 10.6084/m9.figshare.3555357.v1
title: Appendix D. Seagrass growth rate methods and nutrient content analysis.

description: Seagrass growth rate methods and nutrient content analysis.
DOI: 10.6084/m9.figshare.4653433.v1
title: Proyecto IAMAE: Priorización de indicadores y fichas técnicas desarrolladas

description: This fileset comprises the results of a Nominal Group Technique (NGT) about 150+ indicators from OECD and Medicare and Medicaid Centers, and technical specifications of 8 adapted indicators (translated into Spanish).<br>Prioritization by NGT results was used to select key indicators as depicted by colours in the excel file (scores provided).<br>Technical specifications of the 8 highest scored indicators were developed and provided in this fileset.
DOI: 10.6084/m9.figshare.6230555.v1
title: MABC epitope MHC-II binding prediction

description: MHC-II binding prediction of twelve MABC candidate proteins using stabilization matrix alignment method (SMN align) from the Immune Epitope Database (IEDB, www.iedb.org). See paper for further details.
DOI: 10.6084/m9.figshare.28701713.v1
title: Citas a la producción académica de Karolina Gilas

description: Citas a la producción académica de Karolina Gilas