cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3810951
title: The anatomy characteristics of 7000 inferior abdominal aortic aneurysms, CHAP patient cohort (percentiles) by gender

description: <b>CHAP, the Characterization of Human Aortic Anatomy Project</b>, which started in 2009 by the Food and Drug Administration (FDA) and practicing clinicians in the community, is a collaboration to gather and analyze anatomic data from patients with aortic aneurysms. One of CHAP’s first goals is to characterize the anatomy of unrepaired infrarenal AAA (iAAA) from a large subset of the patient population, with the hope of elucidating pertinent anatomical differences between men and women that might lead to treatment disparities, and to expand patient eligibility for EVAR by identifying criteria for augmenting endovascular design and evaluation. The CHAP database contains data from centers that consecutively submit[1] their pre-operative CT scans of unrepaired aneurysm cases to M2S for analysis and surgical planning. M2S, Inc. (Lebanon, NH) is a third party core lab that independently reviews each scan and records anatomic measurements that define the geometry and shape of aneurysms and other vascular pathologies. The following studies have been conducted under CHAP with approval from the FDA and center specific Institutional Review Boards: (i) Single center anatomical study [1], (ii) 3-center anatomical study [2], (iii) 11-center anatomical study, current study. For these studies, the measurements (as listed in the Table below) of the iAAA anatomy were determined in conjunction with SVS reporting standards [3]. The table below are the data from the CHAP database for infrarenal AAA binned by gender. [1] Sweet MP, Fillinger MF, Morrison TM, and Abel DB. J Vasc Surg 2011;54(4):931-7. [2] Morrison, T.M., Yan, X., Abel, D.B., Fairman, R.M., Glickman, M.H., and Fillinger, M.F., J of Vasc Surg, 55(6):30S 2012 [3] Chaikof EL, Blankensteijn JD, Harris PL, et al. J Vasc Surg 2002;35:1048-60. <br> [1] <i>Two sites consecutively submitted cases that were considered for EVAR only. We tested for heterogeneity and there were no statistical differences between those sites and the 9 remaining center. Therefore, we determined that it was acceptable to keep data from all 11 centers.</i>
DOI: 10.6084/m9.figshare.3810951.v1
title: The anatomy characteristics of 7000 inferior abdominal aortic aneurysms, CHAP patient cohort (percentiles) by gender

description: <b>CHAP, the Characterization of Human Aortic Anatomy Project</b>, which started in 2009 by the Food and Drug Administration (FDA) and practicing clinicians in the community, is a collaboration to gather and analyze anatomic data from patients with aortic aneurysms. One of CHAP’s first goals is to characterize the anatomy of unrepaired infrarenal AAA (iAAA) from a large subset of the patient population, with the hope of elucidating pertinent anatomical differences between men and women that might lead to treatment disparities, and to expand patient eligibility for EVAR by identifying criteria for augmenting endovascular design and evaluation. The CHAP database contains data from centers that consecutively submit[1] their pre-operative CT scans of unrepaired aneurysm cases to M2S for analysis and surgical planning. M2S, Inc. (Lebanon, NH) is a third party core lab that independently reviews each scan and records anatomic measurements that define the geometry and shape of aneurysms and other vascular pathologies. The following studies have been conducted under CHAP with approval from the FDA and center specific Institutional Review Boards: (i) Single center anatomical study [1], (ii) 3-center anatomical study [2], (iii) 11-center anatomical study, current study. For these studies, the measurements (as listed in the Table below) of the iAAA anatomy were determined in conjunction with SVS reporting standards [3]. The table below are the data from the CHAP database for infrarenal AAA binned by gender. [1] Sweet MP, Fillinger MF, Morrison TM, and Abel DB. J Vasc Surg 2011;54(4):931-7. [2] Morrison, T.M., Yan, X., Abel, D.B., Fairman, R.M., Glickman, M.H., and Fillinger, M.F., J of Vasc Surg, 55(6):30S 2012 [3] Chaikof EL, Blankensteijn JD, Harris PL, et al. J Vasc Surg 2002;35:1048-60. <br> [1] <i>Two sites consecutively submitted cases that were considered for EVAR only. We tested for heterogeneity and there were no statistical differences between those sites and the 9 remaining center. Therefore, we determined that it was acceptable to keep data from all 11 centers.</i>
DOI: 10.6084/m9.figshare.3810945
title: Schaefer_Buratto_et_al._2016_PLOS_ONE_Data

description: This is a set of files containing the data from a paper to appear soon in PLOS One (as of September 2016). The paper is authored by Alexandre Schaefer, Luciano G Buratto, Nobuhiko Goto and Emilie Brotherhood, and it shows that two brain event-related potentials - the Feedback-Related Negativity and the P300 - are sensitive to price expectation violations during a simulated shopping context. The actual accepted paper is included amongst the files.
DOI: 10.6084/m9.figshare.3810945.v1
title: Schaefer_Buratto_et_al._2016_PLOS_ONE_Data

description: This is a set of files containing the data from a paper to appear soon in PLOS One (as of September 2016). The paper is authored by Alexandre Schaefer, Luciano G Buratto, Nobuhiko Goto and Emilie Brotherhood, and it shows that two brain event-related potentials - the Feedback-Related Negativity and the P300 - are sensitive to price expectation violations during a simulated shopping context. The actual accepted paper is included amongst the files.
DOI: 10.6084/m9.figshare.3810930
title: Realtime Kinetics of in-vitro RNA Polymerase Transcription

description: smFRET realtime kinetics experiments of RNAP transitioning from initiation to elongation.<br>Measurements were performed both on a 8-spot smFRET system and a single-spot usALEX-smFRET system.<br><br><br>
DOI: 10.6084/m9.figshare.3810930.v2
title: Realtime Kinetics of in-vitro RNA Polymerase Transcription

description: smFRET realtime kinetics experiments of RNAP transitioning from initiation to elongation.<br>Measurements were performed both on a 8-spot smFRET system and a single-spot usALEX-smFRET system.<br><br><br>
DOI: 10.6084/m9.figshare.3810930.v1
title: Realtime Kinetics of in-vitro RNA Polymerase II Transcription

description: smFRET realtime kinetics experiments of RNAP transitioning from initiation to elongation.<br>Measurements were performed both on a 8-spot smFRET system and a single-spot usALEX-smFRET system.<br><br><br>
DOI: 10.6084/m9.figshare.12912479
title: Psychological consequences among health care workers at hospital setting in Yangon, epicentre of COVID-19 in Myanmar

description: Psychological consequences among health care workers at hospital setting in Yangon, epicentre of COVID-19 in Myanmar
DOI: 10.6084/m9.figshare.12912479.v1
title: Psychological consequences among health care workers at hospital setting in Yangon, epicentre of COVID-19 in Myanmar

description: Psychological consequences among health care workers at hospital setting in Yangon, epicentre of COVID-19 in Myanmar
DOI: 10.6084/m9.figshare.3810855
title: Open Data Challenges

description: Calls in favour of Open Data in research are becoming overwhelming. They are at national [@RCKUOpen] and international levels [@Moedas2015, @RSOpen, @ams2016]. I will set out a working definition of Open Data and will discuss the key challenges preventing the publication of Open Data becoming standard practice. I will attempt to draw some general solutions to those challenges from field specific examples.
DOI: 10.6084/m9.figshare.3810822
title: Air Temperature Data from California Delta (1931-2009)

description: These are the air temperatures used to both calibrate and drive the hindcast model found at https://dx.doi.org/10.6084/m9.figshare.3810807.<br>The data in this file were downloaded from the California Climate Data Archive.
DOI: 10.6084/m9.figshare.3810822.v2
title: Air Temperature Data from California Delta (1931-2009)

description: These are the air temperatures used to both calibrate and drive the hindcast model found at https://dx.doi.org/10.6084/m9.figshare.3810807.<br>The data in this file were downloaded from the California Climate Data Archive.
DOI: 10.6084/m9.figshare.3810807
title: Hindcast of Water Temperatures in Sacramento-San Joaquin Delta from 1931-2009

description: Hindcasted water temperatures at 12 sites around the Delta (Grantline Canal at Tracy Blvd Bridge, San Joaquin River at Antioch between lights 7 & 8, Stanislaus River at Ripon, San Joaquin River before Prinsoner's Point, Selby (Wickland Oil Peir), Sacramento River at Martinez, Stockton Ship Channel at Burns Cutoff, Old River at Tracy Blvd, Sacramento River near Mallard Island, San Joaquin River at Mossdale, Sacramento River at Rio Vista Bridge, Sacramento River at Hood) from 1931 through 2009 and the measured water temperatures used to calibrate the model, and metadata.<br>
DOI: 10.6084/m9.figshare.3810807.v2
title: Hindcast of Water Temperatures in Sacramento-San Joaquin Delta from 1931-2009

description: Hindcasted water temperatures at 12 sites around the Delta (Grantline Canal at Tracy Blvd Bridge, San Joaquin River at Antioch between lights 7 & 8, Stanislaus River at Ripon, San Joaquin River before Prinsoner's Point, Selby (Wickland Oil Peir), Sacramento River at Martinez, Stockton Ship Channel at Burns Cutoff, Old River at Tracy Blvd, Sacramento River near Mallard Island, San Joaquin River at Mossdale, Sacramento River at Rio Vista Bridge, Sacramento River at Hood) from 1931 through 2009 and the measured water temperatures used to calibrate the model, and metadata.<br>
DOI: 10.6084/m9.figshare.3810807.v1
title: Hindcast.xls

description: Hindcasted water temperatures at 12 sites around the Delta (Grantline Canal at Tracy Blvd Bridge, San Joaquin River at Antioch between lights 7 & 8, Stanislaus River at Ripon, San Joaquin River before Prinsoner's Point, Selby (Wickland Oil Peir), Sacramento River at Martinez, Stockton Ship Channel at Burns Cutoff, Old River at Tracy Blvd, Sacramento River near Mallard Island, San Joaquin River at Mossdale, Sacramento River at Rio Vista Bridge, Sacramento River at Hood) from 1931 through 2009 and the measured water temperatures used to calibrate the model, and metadata.<br>
DOI: 10.6084/m9.figshare.3810693
title: Data from: "Recovery following defoliation involves shifts in allocation that favor storage and reproduction over radial growth in black oak"

description: Data for Wiley et al. in Journal of Ecology<br>"Recovery following defoliation involves shifts in allocation that favor storage and reproduction over radial growth in black oak"<br>
DOI: 10.6084/m9.figshare.3810693.v1
title: Data from: "Recovery following defoliation involves shifts in allocation that favor storage and reproduction over radial growth in black oak"

description: Data for Wiley et al. in Journal of Ecology<br>"Recovery following defoliation involves shifts in allocation that favor storage and reproduction over radial growth in black oak"<br>
DOI: 10.6084/m9.figshare.3810618
title: Matriz de datos TFMempleada.sav

description: Analysis of the extent to which the capabilities of the three subcompetences of scientific competence in the activities on the content "soil" and related textbooks Primary Education contents work
DOI: 10.6084/m9.figshare.3810618.v1
title: Matriz de datos TFMempleada.sav

description: Analysis of the extent to which the capabilities of the three subcompetences of scientific competence in the activities on the content "soil" and related textbooks Primary Education contents work
DOI: 10.6084/m9.figshare.3808539
title: Measures of malaria burden after long-lasting insecticidal net distribution and indoor residual spraying at three sites in Uganda: A prospective observational study

description: Databases used for all analyses in support of the published manuscript<br>
DOI: 10.6084/m9.figshare.3808347
title: Summary all data.xlsx

description: These are original data of older persons performing a computer-based version of the "multiple errands task" which is thought to reflect executive functioning. Before testing, participants were primed with positive or negative age stereotypes, or were not primed either way.Statistics are to be published in PLoSONE 2016 (Bock O, Akpinar S, Performance of Older Persons in a Simulated Shopping Task is Influenced by Priming with Age Stereotypes) <br>
DOI: 10.6084/m9.figshare.3808347.v1
title: Summary all data.xlsx

description: These are original data of older persons performing a computer-based version of the "multiple errands task" which is thought to reflect executive functioning. Before testing, participants were primed with positive or negative age stereotypes, or were not primed either way.Statistics are to be published in PLoSONE 2016 (Bock O, Akpinar S, Performance of Older Persons in a Simulated Shopping Task is Influenced by Priming with Age Stereotypes) <br>
DOI: 10.6084/m9.figshare.3808335
title: The failure to fail underperforming trainees in health professions education: A BEME systematic review: BEME Guide No. 42

description: <b>Background:</b> Many clinical educators feel unprepared and/or unwilling to report unsatisfactory trainee performance. This systematic review consolidates knowledge from medical, nursing, and dental literature on the experiences and perceptions of evaluators or assessors with this failure to fail phenomenon. <b>Methods:</b> We searched the English language literature in CINAHL, EMBASE, and MEDLINE from January 2005 to January 2015. Qualitative and quantitative studies were included. Following our review protocol, registered with BEME, reviewers worked in pairs to identify relevant articles. The investigators participated in thematic analysis of the qualitative data reported in these studies. Through several cycles of analysis, discussion and reflection, the team identified the barriers and enablers to failing a trainee. <b>Results:</b> From 5330 articles, we included 28 publications in the review. The barriers identified were (1) assessor’s professional considerations, (2) assessor’s personal considerations, (3) trainee related considerations, (4) unsatisfactory evaluator development and evaluation tools, (5) institutional culture and (6) consideration of available remediation for the trainee. The enablers identified were: (1) duty to patients, to society, and to the profession, (2) institutional support such as backing a failing evaluation, support from colleagues, evaluator development, and strong assessment systems, and (3) opportunities for students after failing. <b>Discussion/conclusions:</b> The inhibiting and enabling factors to failing an underperforming trainee were common across the professions included in this study, across the 10 years of data, and across the educational continuum. We suggest that these results can inform efforts aimed at addressing the failure to fail problem.
DOI: 10.6084/m9.figshare.3808335.v1
title: The failure to fail underperforming trainees in health professions education: A BEME systematic review: BEME Guide No. 42

description: <b>Background:</b> Many clinical educators feel unprepared and/or unwilling to report unsatisfactory trainee performance. This systematic review consolidates knowledge from medical, nursing, and dental literature on the experiences and perceptions of evaluators or assessors with this failure to fail phenomenon. <b>Methods:</b> We searched the English language literature in CINAHL, EMBASE, and MEDLINE from January 2005 to January 2015. Qualitative and quantitative studies were included. Following our review protocol, registered with BEME, reviewers worked in pairs to identify relevant articles. The investigators participated in thematic analysis of the qualitative data reported in these studies. Through several cycles of analysis, discussion and reflection, the team identified the barriers and enablers to failing a trainee. <b>Results:</b> From 5330 articles, we included 28 publications in the review. The barriers identified were (1) assessor’s professional considerations, (2) assessor’s personal considerations, (3) trainee related considerations, (4) unsatisfactory evaluator development and evaluation tools, (5) institutional culture and (6) consideration of available remediation for the trainee. The enablers identified were: (1) duty to patients, to society, and to the profession, (2) institutional support such as backing a failing evaluation, support from colleagues, evaluator development, and strong assessment systems, and (3) opportunities for students after failing. <b>Discussion/conclusions:</b> The inhibiting and enabling factors to failing an underperforming trainee were common across the professions included in this study, across the 10 years of data, and across the educational continuum. We suggest that these results can inform efforts aimed at addressing the failure to fail problem.
DOI: 10.6084/m9.figshare.3808329
title: Clumped isotope evidence for episodic, rapid flow of fluids in a mineralized fault system in the Peak District, UK

description: Supplemetary information for the paper:<br>Clumped isotope evidence for episodic, rapid flow of fluids in a mineralized fault system in the Peak District, UK<br><br>submitted to the Journal of the Geological Society, London
DOI: 10.6084/m9.figshare.3808329.v1
title: Episodic, rapid flow of fluids in a mineralised fault system in the Peak District UK - supplementary information

description: Supplemetary information for the paper:<br>Episodic, rapid flow of fluids in a mineralised fault system in the Peak District UK<br>submitted to the Journal of the Geological Society, London
DOI: 10.6084/m9.figshare.3808329.v2
title: Episodic, rapid flow of fluids in a mineralised fault system in the Peak District UK - supplementary information

description: Supplemetary information for the paper:<br>Episodic, rapid flow of fluids in a mineralised fault system in the Peak District UK<br>submitted to the Journal of the Geological Society, London
DOI: 10.6084/m9.figshare.3808329.v3
title: Episodic, rapid flow of fluids in a mineralised fault system in the Peak District UK - supplementary information

description: Supplemetary information for the paper:<br>Episodic, rapid flow of fluids in a mineralised fault system in the Peak District UK<br>submitted to the Journal of the Geological Society, London
DOI: 10.6084/m9.figshare.3808329.v4
title: Episodic, rapid flow of fluids in a mineralised fault system in the Peak District UK - supplementary information

description: Supplemetary information for the paper:<br>Episodic, rapid flow of fluids in a mineralised fault system in the Peak District UK<br>submitted to the Journal of the Geological Society, London
DOI: 10.6084/m9.figshare.3808329.v5
title: Episodic, rapid flow of fluids in a mineralised fault system in the Peak District UK - supplementary information

description: Supplemetary information for the paper:<br>Episodic, rapid flow of fluids in a mineralised fault system in the Peak District UK<br>submitted to the Journal of the Geological Society, London
DOI: 10.6084/m9.figshare.3808329.v6
title: Clumped isotope evidence for episodic, rapid flow of fluids in a mineralized fault system in the Peak District, UK

description: Supplemetary information for the paper:<br>Clumped isotope evidence for episodic, rapid flow of fluids in a mineralized fault system in the Peak District, UK<br><br>submitted to the Journal of the Geological Society, London
DOI: 10.6084/m9.figshare.3808329.v7
title: Clumped isotope evidence for episodic, rapid flow of fluids in a mineralized fault system in the Peak District, UK

description: Supplemetary information for the paper:<br>Clumped isotope evidence for episodic, rapid flow of fluids in a mineralized fault system in the Peak District, UK<br><br>submitted to the Journal of the Geological Society, London
DOI: 10.6084/m9.figshare.3808329.v8
title: Clumped isotope evidence for episodic, rapid flow of fluids in a mineralized fault system in the Peak District, UK

description: Supplemetary information for the paper:<br>Clumped isotope evidence for episodic, rapid flow of fluids in a mineralized fault system in the Peak District, UK<br><br>submitted to the Journal of the Geological Society, London
DOI: 10.6084/m9.figshare.3808212
title: Dataset of photos showing tree branches of a tree devoid of leaves

description: This small dataset shows two photographs of a tree devoid of most of its leaves from all branches. Geographical context of the picture is in tropical Singapore with abundant rainfall and sunshine. Photos were taken using a 5 megapixel smartphone camera.
DOI: 10.6084/m9.figshare.3808179
title: Supplementary Material for: Phase I Study of CHK1 Inhibitor LY2603618 in Combination with Gemcitabine in Patients with Solid Tumors

description: <i>Objective:</i> LY2603618, a selective inhibitor of checkpoint kinase 1 (CHK1) and key regulator of the DNA damage checkpoint, may enhance the effects of antimetabolites. This phase I study defined the recommended phase II dose of LY2603618 combined with gemcitabine. <i>Patients and Methods:</i> Patients with advanced/metastatic disease were administered doses of LY2603618 (70-250 mg/m2or flat-fixed doses of 200 or 230 mg) after gemcitabine (1,000 mg/m2). Safety and pharmacokinetics (PK) were assessed. <i>Results:</i> Among the 50 patients enrolled, frequent adverse events possibly related to study drug treatment included fatigue (44%), decreased platelets (42%), decreased neutrophils (32%), nausea (26%), and decreased hemoglobin (20%). Systemic exposure of LY2603618 increased dose dependently, while clearance was relatively dose independent. The mean LY2603618 half-life varied; however, the durations were still suitable for maintaining human exposures while minimizing accumulation. LY2603618 PK were not altered by gemcitabine administration. Plasma exposures that correlate with the maximal pharmacodynamic effect in nonclinical models were achieved for all doses. One patient with non-small cell lung cancer carcinoma achieved a partial response; 22 patients had stable disease. <i>Conclusions:</i> The maximum tolerated dose of LY2603618 combined with gemcitabine was 200 mg/m2, but a fixed LY2603618 dose of 230 mg combined with gemcitabine was selected as the recommended phase II dose.
DOI: 10.6084/m9.figshare.3808179.v1
title: Supplementary Material for: Phase I Study of CHK1 Inhibitor LY2603618 in Combination with Gemcitabine in Patients with Solid Tumors

description: <i>Objective:</i> LY2603618, a selective inhibitor of checkpoint kinase 1 (CHK1) and key regulator of the DNA damage checkpoint, may enhance the effects of antimetabolites. This phase I study defined the recommended phase II dose of LY2603618 combined with gemcitabine. <i>Patients and Methods:</i> Patients with advanced/metastatic disease were administered doses of LY2603618 (70-250 mg/m2or flat-fixed doses of 200 or 230 mg) after gemcitabine (1,000 mg/m2). Safety and pharmacokinetics (PK) were assessed. <i>Results:</i> Among the 50 patients enrolled, frequent adverse events possibly related to study drug treatment included fatigue (44%), decreased platelets (42%), decreased neutrophils (32%), nausea (26%), and decreased hemoglobin (20%). Systemic exposure of LY2603618 increased dose dependently, while clearance was relatively dose independent. The mean LY2603618 half-life varied; however, the durations were still suitable for maintaining human exposures while minimizing accumulation. LY2603618 PK were not altered by gemcitabine administration. Plasma exposures that correlate with the maximal pharmacodynamic effect in nonclinical models were achieved for all doses. One patient with non-small cell lung cancer carcinoma achieved a partial response; 22 patients had stable disease. <i>Conclusions:</i> The maximum tolerated dose of LY2603618 combined with gemcitabine was 200 mg/m2, but a fixed LY2603618 dose of 230 mg combined with gemcitabine was selected as the recommended phase II dose.
DOI: 10.6084/m9.figshare.3808173
title: Ecology and phylogenetic relationships of gall midges

description: Collection of COI, 12S, EF 1a gene sequences of gall midges