cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28827281.v1
title: Supplementary Material for: Adverse Cutaneous Reactions to Monoclonal Antibodies: Stevens-Johnson Syndrome, Toxic Epidermal Necrolysis, Erythema Multiforme, and Fixed Drug Eruption – A Systematic Review

description: Background
The therapeutic use of monoclonal antibodies (mAbs) has significantly increased since the first mAb was introduced. Despite their therapeutic benefits, mAbs have been accompanied by a rise in adverse effects, affecting various organ systems including the skin. This study consolidates the current literature on the incidence, characteristics, and management of adverse dermatological events (ADEs) post-mAb treatment, focusing on Stevens-Johnson syndrome (SJS), Toxic Epidermal Necrolysis (TEN), Erythema Multiforme (EM), and Fixed Drug Eruption (FDE).

Summary
A comprehensive PubMed search from 1980 to January 2024 included studies on mAbs causing SJS, TEN, EM, or FDE in humans. Screening was conducted on Covidence, with data extraction on demographics, mAb details, rash characteristics, and treatment. Of the initial 2002 articles, 29 met the inclusion criteria, highlighting 31 cases of ADEs. The onset of these rashes was delayed, often occurring significantly after starting mAb therapy, with a mean onset time considerably longer than that associated with traditional drugs. Additionally, neither patient sex nor concurrent medication use affected the likelihood of developing these reactions.

Key messages
This review underscores the prolonged timeline for the onset of ADEs from mAbs, distinct from reactions induced by traditional drugs, aligning with the characteristics of Progressive Immunotherapy-Related Mucocutaneous Eruption. The lack of correlation with patient sex or concurrent medications reaffirms the inherent risk of mAbs. These findings highlight the need for clinicians to monitor and educate patients about the potential for delayed dermatological reactions from mAb treatment to ensure timely management and better outcomes.
DOI: 10.6084/m9.figshare.28827284
title: Supplementary Material for: Aqueous Humor Liquid Biopsy to Exclude Retinoblastoma for a Child with an Intraocular Mass

description: Introduction: Intraocular masses in children may present diagnostic dilemmas when clinical examination and imaging are insufficient to diagnose or exclude retinoblastoma. Furthermore, direct biopsy is contraindicated because of the risk of tumor seeding in retinoblastoma. Recent research has shown that aqueous humor biopsy is a safe method of obtaining cell-free DNA which can be used to diagnose retinoblastoma with high sensitivity and specificity, which provides a significant benefit in cases when the diagnosis is otherwise unclear.
Case Presentation: An 11-month-old female presented with poor visual behavior since birth and an intraocular mass in the left eye. Examination under anesthesia revealed a detached retina rolled into a stalk attached to the optic nerve in the right eye, and a white retrolental mass with perfused vessels in the left eye. Magnetic resonance imaging demonstrated a heterogeneous mass filling the left globe with diffusion restriction and contract enhancement. Aqueous humor liquid biopsy was performed in both eyes with low DNA yield and no mutations associated with retinoblastoma were identified. The patient was observed with no interval change in examination for six months.
Conclusion: Aqueous humor liquid biopsy can be used to exclude a diagnosis of retinoblastoma in cases of pediatric intraocular mass with uncertain diagnosis.
DOI: 10.6084/m9.figshare.28827284.v1
title: Supplementary Material for: Aqueous Humor Liquid Biopsy to Exclude Retinoblastoma for a Child with an Intraocular Mass

description: Introduction: Intraocular masses in children may present diagnostic dilemmas when clinical examination and imaging are insufficient to diagnose or exclude retinoblastoma. Furthermore, direct biopsy is contraindicated because of the risk of tumor seeding in retinoblastoma. Recent research has shown that aqueous humor biopsy is a safe method of obtaining cell-free DNA which can be used to diagnose retinoblastoma with high sensitivity and specificity, which provides a significant benefit in cases when the diagnosis is otherwise unclear.
Case Presentation: An 11-month-old female presented with poor visual behavior since birth and an intraocular mass in the left eye. Examination under anesthesia revealed a detached retina rolled into a stalk attached to the optic nerve in the right eye, and a white retrolental mass with perfused vessels in the left eye. Magnetic resonance imaging demonstrated a heterogeneous mass filling the left globe with diffusion restriction and contract enhancement. Aqueous humor liquid biopsy was performed in both eyes with low DNA yield and no mutations associated with retinoblastoma were identified. The patient was observed with no interval change in examination for six months.
Conclusion: Aqueous humor liquid biopsy can be used to exclude a diagnosis of retinoblastoma in cases of pediatric intraocular mass with uncertain diagnosis.
DOI: 10.15468/dl.aga6r8
title: Occurrence Download

description: A dataset containing 1602 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhyacotriton variegatus Stebbins & Lowe, 1951",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1602 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003660-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5uq8er
title: Occurrence Download

description: A dataset containing 64032 records in GBIF matching the query:
SELECT
 "year",
 GBIF_MGRSCode(10000, decimalLatitude, decimalLongitude,
 COALESCE(coordinateUncertaintyInMeters, 1000)) AS mgrsCode,
 speciesKey,
 species,
 family,
 COUNT(*) AS n,
 MIN(COALESCE(coordinateUncertaintyInMeters, 1000)) AS minCoordinateUncertaintyInMeters,
 IF(ISNULL(family), NULL, SUM(COUNT(*)) OVER (PARTITION BY family)) AS familyCount
 FROM
 occurrence
 WHERE
 occurrenceStatus = 'PRESENT'
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND level1gid = 'BEL.2_1'
 AND "year" &gt;= 2007
 AND "year" &lt;= 2022
 AND speciesKey IS NOT NULL
 AND decimalLatitude IS NOT NULL
 AND decimalLongitude IS NOT NULL
 AND class = 'Aves'
 AND collectionCode = 'ABV'
 GROUP BY
 "year",
 mgrsCode,
 speciesKey,
 family,
 species
 ORDER BY
 "year" ASC,
 mgrsCode ASC,
 speciesKey ASC

 The dataset's 64032 records were derived from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003651-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60686/t-fsd3952
title: FSD3952 Vocational School Student Survey 2022 (VET Student Survey)
DOI: 10.60686/t-fsd3953
title: FSD3953 Vocational School Student Survey 2024 (VET Student Survey)
DOI: 10.15468/dl.g4t7xk
title: Occurrence Download

description: A dataset containing 305 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Material sample, Occurrence evidence, Material citation, Specimen, Fossil, Living Specimen)",
 "Country is Italy",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Myodes glareolus (Schreber, 1780), Clethrionomys glareolus (Schreber, 1780))"
 ]
}

 The dataset includes 305 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003661-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ggxzzg
title: Occurrence Download

description: A dataset containing 379245 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is South Africa",
 "DatasetKey is Coordinated Waterbird Counts"
 ]
}

 The dataset includes 379245 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003656-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5xju8h
title: Occurrence Download

description: A dataset containing 1178 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Tropicos MO Specimen Data, Tropicos Specimens Non-MO, NMNH Extant Specimen Records (USNM, US), Herbario Nacional Colombiano (COL), Digitalización y Sistematización de las Colecciones Biológicas Nacionales del Instituto de Biología, UNAM (Plantas vasculares), The New York Botanical Garden Herbarium (NY), Herbario Universidad de Antioquia (HUA), iNaturalist Research-grade Observations)",
 "TaxonKey is Carludovica palmata Ruiz & Pav."
 ]
}

 The dataset includes 1178 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003663-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.7541362
title: Agricultural yield database Flanders

description: Database containing the evolution of yield of agricultural crops in Flanders under ‘conventional’ farming practices, as part of the project PEILIMPACT. This database contains yield in ton/ha of the most important crops in Flanders. When available, it includes the planting and harvesting dates, and mowing times in case of grass. At the moment, the crops included in the database are maize, winter wheat, sugar beet, potato and grass. The data is collected from different research departments at ILVO and other governmental and private Flemish institutions.
DOI: 10.5281/zenodo.7541363
title: Agricultural yield database Flanders

description: Database containing the evolution of yield of agricultural crops in Flanders under ‘conventional’ farming practices, as part of the project PEILIMPACT. This database contains yield in ton/ha of the most important crops in Flanders. When available, it includes the planting and harvesting dates. At the moment, the crops included in the database are maize, winter wheat, sugar beet, potato and grass. The data is collected from different research departments at ILVO and other governmental and private Flemish institutions.
DOI: 10.15468/dl.pef3bf
title: Occurrence Download

description: A dataset containing 287 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sanguirana mearnsi (Stejneger, 1905)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 287 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003664-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/11184702
title: Public Opinion on Climate Change (Updated Daily)
DOI: 10.15468/dl.a6pg47
title: Occurrence Download

description: A dataset containing 14304 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera leo (Linnaeus, 1758)"
 ]
}

 The dataset includes 14304 records from 174 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003665-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ngyhue
title: Occurrence Download

description: A dataset containing 12422 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Scaphiopus couchii Baird, 1854",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 12422 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003666-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28675724
title: MEG evoked response data, MRIs and cortical surfaces

description: Current flow that gives rise to non-invasive Magnetoencephalographic (MEG) data derives predominantly from pyramidal neurons oriented orthogonal to the cortical surface. The estimate of current flow based on extra-cranial magnetic fields is a well-known ill-posed problem; however, this current distribution must depend on anatomy. In other words, a veridical estimate of current flow should discriminate between true and distorted versions of the brain. Here, we make use of advances in diffeomorphic brain shape modelling to construct a set of parametrically deformable cortical surfaces. We use a latent space of 100 components to construct cortical surfaces that are representative of the population. We show how these geometric distortions can be used to quantify the performance of MEG source reconstruction algorithms and metrics of fit.
DOI: 10.15468/dl.rj5tu7
title: Occurrence Download

description: A dataset containing 852409 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-5.47517 41.03718,22.66187 41.03718,22.66187 52.28718,-5.47517 52.28718,-5.47517 41.03718))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Fraxinus excelsior L."
 ]
}

 The dataset includes 852409 records from 3001 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003657-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d3vt4q
title: Occurrence Download

description: A dataset containing 538 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Landolphia heudelotii A.DC.",
 "Continent is Africa"
 ]
}

 The dataset includes 538 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004447-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ufy4k
title: Occurrence Download

description: A dataset containing 2735 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Achillea millefolium L.",
 "Geometry POLYGON((-105 34, -94 34, -94 43, -105 43, -105 34))"
 ]
}

 The dataset includes 2735 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004446-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.guzcyz
title: Occurrence Download

description: A dataset containing 1377 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhinella dorbignyi (Duméril & Bibron, 1841)"
 ]
}

 The dataset includes 1377 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004448-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive146638.20251217.10
title: Sphingomonas paucimobilis

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0134751.10fu
title: SH0134751.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive146639.20241212.9.2
title: Achromobacter piechaudii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive146639.20251217.10
title: Achromobacter piechaudii

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0134752.10fu
title: SH0134752.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive146640.20241212.9.2
title: Lactobacillus gasseri

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive146640.20251217.10
title: Lactobacillus gasseri

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0134753.10fu
title: SH0134753.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive146641.20241212.9.2
title: Flavobacterium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive146641.20251217.10
title: Flavobacterium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0134754.10fu
title: SH0134754.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive146642.20230509.8.1
title: Rothia mucilaginosa

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive146642.20251217.10
title: Rothia mucilaginosa

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0134755.10fu
title: SH0134755.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive146643.20241212.9.2
title: Staphylococcus saccharolyticus

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.