cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19390561
title: A virtual multi-label approach to imbalanced data classification

description: One of the most challenging issues in machine learning is imbalanced data analysis. Usually, in this type of research, correctly predicting minority labels is more critical than correctly predicting majority labels. However, traditional machine learning techniques easily lead to learning bias. Traditional classifiers tend to place all subjects in the majority group, resulting in biased predictions. Machine learning studies are typically conducted from one of two perspectives: a data-based perspective or a model-based perspective. Oversampling and undersampling are examples of data-based approaches, while the addition of costs, penalties, or weights to optimize the algorithm is typical of a model-based approach. Some ensemble methods have been studied recently. These methods cause various problems, such as overfitting, the omission of some information, and long computation times. In addition, these methods do not apply to all kinds of datasets. Based on this problem, the virtual labels (ViLa) approach for the majority label is proposed to solve the imbalanced problem. A new multiclass classification approach with the equal K-means clustering method is demonstrated in the study. The proposed method is compared with commonly used imbalance problem methods, such as sampling methods (oversampling, undersampling, and SMOTE) and classifier methods (SVM and one-class SVM). The results show that the proposed method performs better when the degree of data imbalance increases and will gradually outperform other methods.
DOI: 10.6084/m9.figshare.19390561.v1
title: A virtual multi-label approach to imbalanced data classification

description: One of the most challenging issues in machine learning is imbalanced data analysis. Usually, in this type of research, correctly predicting minority labels is more critical than correctly predicting majority labels. However, traditional machine learning techniques easily lead to learning bias. Traditional classifiers tend to place all subjects in the majority group, resulting in biased predictions. Machine learning studies are typically conducted from one of two perspectives: a data-based perspective or a model-based perspective. Oversampling and undersampling are examples of data-based approaches, while the addition of costs, penalties, or weights to optimize the algorithm is typical of a model-based approach. Some ensemble methods have been studied recently. These methods cause various problems, such as overfitting, the omission of some information, and long computation times. In addition, these methods do not apply to all kinds of datasets. Based on this problem, the virtual labels (ViLa) approach for the majority label is proposed to solve the imbalanced problem. A new multiclass classification approach with the equal K-means clustering method is demonstrated in the study. The proposed method is compared with commonly used imbalance problem methods, such as sampling methods (oversampling, undersampling, and SMOTE) and classifier methods (SVM and one-class SVM). The results show that the proposed method performs better when the degree of data imbalance increases and will gradually outperform other methods.
DOI: 10.6084/m9.figshare.19493550.v1
title: Numerical characterization of support recovery in sparse regression with correlated design

description: Sparse regression is employed in diverse scientific settings as a feature selection method. A pervasive aspect of scientific data is the presence of correlations between predictive features. These correlations hamper both feature selection and estimation and jeopardize conclusions drawn from estimated models. On the other hand, theoretical results on sparsity-inducing regularized regression have largely addressed conditions for selection consistency via asymptotics, and disregard the problem of model selection, whereby regularization parameters are chosen. In this numerical study, we address these issues through exhaustive characterization of the performance of several regression estimators, coupled with a range of model selection strategies. These estimators and selection criteria were examined across correlated regression problems with varying degrees of signal to noise, distributions of non-zero model coefficients, and model sparsity. Our results reveal a fundamental tradeoff between false positive and false negative control in all regression estimators and model selection criteria examined. Additionally, we numerically explore a transition point modulated by the signal-to-noise ratio and spectral properties of the design covariance matrix at which the selection accuracy of all considered algorithms degrades. Overall, we find that SCAD coupled with BIC or empirical Bayes model selection performs the best feature selection across the regression problems considered.
DOI: 10.6084/m9.figshare.7262396
title: Additional file 15: of OsWRKY67 positively regulates blast and bacteria blight resistance by direct activation of PR genes in rice

description: Table S5. Primers used for quantitative RT-PCR and vector construction. (XLSX 10 kb)
DOI: 10.5281/zenodo.10720955
title: Data from: How good are global DNA-based environmental surveys for detecting all protist diversity? Arcellinida as an example of biased representation.

description: Supplementary material for the articles "How good are global DNA-based environmental surveys for detecting all protist diversity? Arcellinida as an example of biased representation."
DOI: 10.5281/zenodo.10720956
title: Data from: How good are global DNA-based environmental surveys for detecting all protist diversity? Arcellinida as an example of biased representation.

description: Supplementary material for the articles "How good are global DNA-based environmental surveys for detecting all protist diversity? Arcellinida as an example of biased representation."
DOI: 10.6084/m9.figshare.7262396.v1
title: Additional file 15: of OsWRKY67 positively regulates blast and bacteria blight resistance by direct activation of PR genes in rice

description: Table S5. Primers used for quantitative RT-PCR and vector construction. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7262408
title: Additional file 16: of OsWRKY67 positively regulates blast and bacteria blight resistance by direct activation of PR genes in rice

description: Table S6. Characteristic fragment ions of the SA standard and its optimized MS/MS condition. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7262408.v1
title: Additional file 16: of OsWRKY67 positively regulates blast and bacteria blight resistance by direct activation of PR genes in rice

description: Table S6. Characteristic fragment ions of the SA standard and its optimized MS/MS condition. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7262414
title: Additional file 1: of Evolution by duplication: paleopolyploidy events in plants reconstructed by deciphering the evolutionary history of VOZ transcription factors

description: Table S1. List of VOZ genes analyzed in each plant genome. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.7262417
title: Additional file 1: of OsWRKY67 positively regulates blast and bacteria blight resistance by direct activation of PR genes in rice

description: Table S1. The microarray data of OsWRKY67 after leaf blast and panicle blast infection. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.7262414.v1
title: Additional file 1: of Evolution by duplication: paleopolyploidy events in plants reconstructed by deciphering the evolutionary history of VOZ transcription factors

description: Table S1. List of VOZ genes analyzed in each plant genome. (XLSX 18 kb)
DOI: 10.6084/m9.figshare.7262417.v1
title: Additional file 1: of OsWRKY67 positively regulates blast and bacteria blight resistance by direct activation of PR genes in rice

description: Table S1. The microarray data of OsWRKY67 after leaf blast and panicle blast infection. (XLSX 9 kb)
DOI: 10.15468/zeaknj
title: Projet de centrale photovoltaïque au sol du Massif de l’Etoile - Insectes - Inventaire non protocolé

description: Liste des insectes contactés dans le cadre des prospections réalisées au niveau du secteur d'étude du projet photovoltaïque "Les Fabriques Ouest" sur la commune de Septèmes-les-vallons (13)
DOI: 10.15468/a5acd7
title: 2022_Alain SADORGE_1

description: 2021_SADORGE_2:Alain SADORGE
DOI: 10.15468/8vbhat
title: Projet d'aménagement de la ZAC Satory Ouest - Reptiles - Inventaire non standardisé - 2

description: Liste des reptiles observés dans le cadre des prospections de terrain réalisées au niveau de l'aire d'étude du projet de la ZAC de Satory Ouest dans le cadre de l'établissement de l'état initial.
DOI: 10.15468/563fzk
title: Construction d'un crématorium animalier - Inventaire mammifères 1

description: Liste 1 des mammifères dans le cadre du projet Séleste à St Laurent de Mûre 69
DOI: 10.15468/hp2gsv
title: Installation d'une centrale photovoltaïque au sol sur une partie de l'ancien centre d'enfouissement de déchets (ISDND) de SUEZ RV sur la commune de PAGNY-SUR-MEUSE - Données Reptiles du projet PV de PAGNY SUR MEUSE

description: Données de prospection dans le cadre de l'étude faune/flore du projet photovoltaïque de Pagny sur Meuse du 21/03/2019 au 14/06/2019 pour les reptiles
DOI: 10.15468/wvydfc
title: Projet d'aménagement de la ZAC Satory Ouest - Invertébrés- Inventaire non standardisé

description: Liste des invertébrés observés dans le cadre des prospections de terrain réalisées au niveau de l'aire d'étude du projet de la ZAC de Satory Ouest dans le cadre de l'établissement de l'état initial.
DOI: 10.15468/ds4sec
title: [SUIVI] Suivi réglementaire du Parc éolien de Rosière - Milan

description: [SUIVI] Suivi réglementaire du Parc éolien de Rosière - Milan royal 2019-2020
DOI: 10.15468/86c3e2
title: Centrale Solaire de Volgelsheim - Chiroptères - inventaire non protocolé

description: Liste des chiroptères observés dans le cadre des prospections de terrain réalisées au niveau de l'aire d'étude du projet de photovoltaïque à Volgelsheim (68)
DOI: 10.15468/qd4693
title: SNC Ferme Eolienne La Grande Plaine - Amphibiens - Inventaire non protocolé

description: Liste des amphibiens observés dans le cadre des prospections de terrain réalisées au niveau de l'aire d'étude immédiate du projet éolien La Grande Plaine (51)
DOI: 10.15468/3ws2rx
title: Renouvellement de l'autorisation d'exploiter de la carrière de Villiers-sur-Seine-Inventaire amphibien

description: Inventaire non standardisé
DOI: 10.6084/m9.figshare.19321012
title: Additional file 2 of Using genomic epidemiology of SARS-CoV-2 to support contact tracing and public health surveillance in rural Humboldt County, California

description: Additional file 2.
DOI: 10.6084/m9.figshare.19321012.v1
title: Additional file 2 of Using genomic epidemiology of SARS-CoV-2 to support contact tracing and public health surveillance in rural Humboldt County, California

description: Additional file 2.
DOI: 10.5281/zenodo.10534416
title: Antimicrobial resistance monitoring results complementing the European Union Summary Report on Antimicrobial Resistance in zoonotic and indicator bacteria from humans, animals and food in 2021/2022 – Lithuania

description: This dataset contains AMR monitoring results in animals and food at the isolate level pursuant to Article 9 of Directive 2003/99/EC and to Annex, part B, of Commission implementing Decision (EU) 2020/1729. In addition, the dataset includes any other results from isolates than the ones mentioned in the Commission implementing Decision (EU) 2020/1729. The quantitative minimum inhibitory concentration (MIC) data from dilution methods are included.

Reporting authorities contributing to 2022 AMR data collection: National Food and Veterinary Risk Assessment Institute
description: LT; xlsx; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.10534417
title: Antimicrobial resistance monitoring results complementing the European Union Summary Report on Antimicrobial Resistance in zoonotic and indicator bacteria from humans, animals and food in 2021/2022 – Lithuania

description: This dataset contains AMR monitoring results in animals and food at the isolate level pursuant to Article 9 of Directive 2003/99/EC and to Annex, part B, of Commission implementing Decision (EU) 2020/1729. In addition, the dataset includes any other results from isolates than the ones mentioned in the Commission implementing Decision (EU) 2020/1729. The quantitative minimum inhibitory concentration (MIC) data from dilution methods are included.

Reporting authorities contributing to 2022 AMR data collection: National Food and Veterinary Risk Assessment Institute
description: LT; xlsx; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.10534436
title: Antimicrobial resistance monitoring results complementing the European Union Summary Report on Antimicrobial Resistance in zoonotic and indicator bacteria from humans, animals and food in 2021/2022 – Austria

description: This dataset contains AMR monitoring results in animals and food at the isolate level pursuant to Article 9 of Directive 2003/99/EC and to Annex, part B, of Commission implementing Decision (EU) 2020/1729. In addition, the dataset includes any other results from isolates than the ones mentioned in the Commission implementing Decision (EU) 2020/1729. The quantitative minimum inhibitory concentration (MIC) data from dilution methods are included.

Reporting authorities contributing to 2022 AMR data collection: Austrian Agency for Health and Food Safety
description: AT; xlsx; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.10534437
title: Antimicrobial resistance monitoring results complementing the European Union Summary Report on Antimicrobial Resistance in zoonotic and indicator bacteria from humans, animals and food in 2021/2022 – Austria

description: This dataset contains AMR monitoring results in animals and food at the isolate level pursuant to Article 9 of Directive 2003/99/EC and to Annex, part B, of Commission implementing Decision (EU) 2020/1729. In addition, the dataset includes any other results from isolates than the ones mentioned in the Commission implementing Decision (EU) 2020/1729. The quantitative minimum inhibitory concentration (MIC) data from dilution methods are included.

Reporting authorities contributing to 2022 AMR data collection: Austrian Agency for Health and Food Safety
description: AT; xlsx; zoonoses_support@efsa.europa.eu
DOI: 10.6084/m9.figshare.14602495
title: Volcanic rocks of the Elashan Formation in the Dulan-Xiangride Basin, East Kunlun Orogenic Belt, NW China: Petrogenesis and implications for Late Triassic geodynamic evolution

description: The volcanic rocks of the Elashan Formation provide important evidence for the Late Triassic post-collisional magmatism in the East Kunlun Orogenic Belt. This study focused on the geochronology, geochemistry, and petrogenesis of volcanic rocks of the Elashan Formation in the Dulan–Xiangride Basin. The 227.9 ± 0.4 Ma dacite exhibits calc-alkaline I-type characteristics, with low Sr/Y and (La/Yb)<sub>N</sub> ratios and prominent negative Eu anomalies. We suggest that the dacite was derived from the partial melting of lower crust at normal crustal thickness. The crystalline tuff (225.0 ± 0.4 Ma) has negative ε<sub>Hf</sub>(t) values, implying that it was likely formed by the partial melting of the ancient crust. The rhyolites (221.3 ± 1.1 and 221.9 ± 0.6 Ma) are peraluminous and calc-alkaline to high-K calc-alkaline. The high SiO<sub>2</sub> and Na<sub>2</sub>O + K<sub>2</sub>O contents, and high K<sub>2</sub>O/Na<sub>2</sub>O and Ga/Al ratios of these rhyolites have an affinity with A-type granite. The rhyolites were formed by the partial melting of Late Paleoproterozoic–Mesoproterozoic lower crust induced by mantle-derived mafic magma underplating. The andesite and basaltic andesites formed at 221.1–217.9 Ma. The zircon Hf isotopic characteristics show that the andesite was likely derived from the partial melting of the Late Paleoproterozoic mafic lower crust. The combination of our new data and previously obtained geological data suggests that the East Kunlun Orogenic Belt underwent three magmatic activities corresponding to three tectono-magmatic events (slab breakoff, the delamination of unstable lower lithospheric mantle, and the intense asthenosphere upwelling with further delamination and continuous crustal thinning) during the Late Triassic.
DOI: 10.6084/m9.figshare.14602495.v1
title: Volcanic rocks of the Elashan Formation in the Dulan-Xiangride Basin, East Kunlun Orogenic Belt, NW China: Petrogenesis and implications for Late Triassic geodynamic evolution

description: The volcanic rocks of the Elashan Formation provide important evidence for the Late Triassic post-collisional magmatism in the East Kunlun Orogenic Belt. This study focused on the geochronology, geochemistry, and petrogenesis of volcanic rocks of the Elashan Formation in the Dulan–Xiangride Basin. The 227.9 ± 0.4 Ma dacite exhibits calc-alkaline I-type characteristics, with low Sr/Y and (La/Yb)<sub>N</sub> ratios and prominent negative Eu anomalies. We suggest that the dacite was derived from the partial melting of lower crust at normal crustal thickness. The crystalline tuff (225.0 ± 0.4 Ma) has negative ε<sub>Hf</sub>(t) values, implying that it was likely formed by the partial melting of the ancient crust. The rhyolites (221.3 ± 1.1 and 221.9 ± 0.6 Ma) are peraluminous and calc-alkaline to high-K calc-alkaline. The high SiO<sub>2</sub> and Na<sub>2</sub>O + K<sub>2</sub>O contents, and high K<sub>2</sub>O/Na<sub>2</sub>O and Ga/Al ratios of these rhyolites have an affinity with A-type granite. The rhyolites were formed by the partial melting of Late Paleoproterozoic–Mesoproterozoic lower crust induced by mantle-derived mafic magma underplating. The andesite and basaltic andesites formed at 221.1–217.9 Ma. The zircon Hf isotopic characteristics show that the andesite was likely derived from the partial melting of the Late Paleoproterozoic mafic lower crust. The combination of our new data and previously obtained geological data suggests that the East Kunlun Orogenic Belt underwent three magmatic activities corresponding to three tectono-magmatic events (slab breakoff, the delamination of unstable lower lithospheric mantle, and the intense asthenosphere upwelling with further delamination and continuous crustal thinning) during the Late Triassic.
DOI: 10.5281/zenodo.10534389
title: Antimicrobial resistance monitoring results complementing the European Union Summary Report on Antimicrobial Resistance in zoonotic and indicator bacteria from humans, animals and food in 2021/2022 – Estonia

description: This dataset contains AMR monitoring results in animals and food at the isolate level pursuant to Article 9 of Directive 2003/99/EC and to Annex, part B, of Commission implementing Decision (EU) 2020/1729. In addition, the dataset includes any other results from isolates than the ones mentioned in the Commission implementing Decision (EU) 2020/1729. The quantitative minimum inhibitory concentration (MIC) data from dilution methods are included.

Reporting authorities contributing to 2022 AMR data collection: Veterinary and Food Board
description: EE; xlsx; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.10534390
title: Antimicrobial resistance monitoring results complementing the European Union Summary Report on Antimicrobial Resistance in zoonotic and indicator bacteria from humans, animals and food in 2021/2022 – Estonia

description: This dataset contains AMR monitoring results in animals and food at the isolate level pursuant to Article 9 of Directive 2003/99/EC and to Annex, part B, of Commission implementing Decision (EU) 2020/1729. In addition, the dataset includes any other results from isolates than the ones mentioned in the Commission implementing Decision (EU) 2020/1729. The quantitative minimum inhibitory concentration (MIC) data from dilution methods are included.

Reporting authorities contributing to 2022 AMR data collection: Veterinary and Food Board
description: EE; xlsx; zoonoses_support@efsa.europa.eu
DOI: 10.34943/58dbe09d-8f9e-4b0d-8be7-5e34edc06556
title: CCGS John P. Tully Navigation System Deployed 2023-09-05

description: The C.C.G.S. John P. Tully Navigation 01 was deployed on 2023-09-05 on CCGS John P. Tully. The Canadian Coast Guard Ship (CCGS) John P. Tully is owned and operated by the Canadian Coast Guard. This device is a Navigation System. Navigational instruments are used to measure and record positional information of ships, buoys, and autonomous underwater vehicles (AUVs). Typical sensors include latitude, longitude, speed, heading, pitch, roll, and depth. It was deployed on a mobile platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/6c539d32-ff2e-4bd9-98f4-704d0b6735b3
title: Burrard Inlet Orientation Instrument Deployed 2024-02-06

description: The Ocean Networks Canada Orientation SN06 was deployed on 2024-02-06 at Burrard Inlet. Burrard Inlet is a coastal fjord in southwestern British Columbia. This device is a Orientation Instrument. Orientation instruments are used on ships, ROVs and instrument packages to record variables like heading, pitch and roll. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.6084/m9.figshare.19321054
title: Additional file 1 of Expression and clinical significance of miR-204 in patients with hypertensive disorder complicating pregnancy

description: Additional file 1: Supplementary table 1. Raw data of qRT-PCR.
DOI: 10.6084/m9.figshare.19321057
title: Additional file 2 of Expression and clinical significance of miR-204 in patients with hypertensive disorder complicating pregnancy

description: Additional file 2: Supplementary table 2. Raw data of study subjects.
DOI: 10.6084/m9.figshare.19321054.v1
title: Additional file 1 of Expression and clinical significance of miR-204 in patients with hypertensive disorder complicating pregnancy

description: Additional file 1: Supplementary table 1. Raw data of qRT-PCR.
DOI: 10.6084/m9.figshare.19321057.v1
title: Additional file 2 of Expression and clinical significance of miR-204 in patients with hypertensive disorder complicating pregnancy

description: Additional file 2: Supplementary table 2. Raw data of study subjects.
DOI: 10.6084/m9.figshare.19321121
title: Additional file 1 of Dissecting of the Deterioration in Eating Quality for Erect Panicle (Ep) Type High Yield Japonica Super Rice in Northest China

description: Additional file 1: Table S1. Comparison of RVA traits for NIL-Ep and NIL-non Ep in the Akitakomachi and Liaogeng5 backgrounds.
DOI: 10.6084/m9.figshare.19321121.v1
title: Additional file 1 of Dissecting of the Deterioration in Eating Quality for Erect Panicle (Ep) Type High Yield Japonica Super Rice in Northest China

description: Additional file 1: Table S1. Comparison of RVA traits for NIL-Ep and NIL-non Ep in the Akitakomachi and Liaogeng5 backgrounds.
DOI: 10.6084/m9.figshare.19321124
title: Additional file 2 of Dissecting of the Deterioration in Eating Quality for Erect Panicle (Ep) Type High Yield Japonica Super Rice in Northest China

description: Additional file 2: Table S2. Comparison of N use efficeiency for NIL-Ep and NIL-non Ep.
DOI: 10.6084/m9.figshare.19321124.v1
title: Additional file 2 of Dissecting of the Deterioration in Eating Quality for Erect Panicle (Ep) Type High Yield Japonica Super Rice in Northest China

description: Additional file 2: Table S2. Comparison of N use efficeiency for NIL-Ep and NIL-non Ep.
DOI: 10.6084/m9.figshare.7262507
title: Additional file 8: of OsWRKY67 positively regulates blast and bacteria blight resistance by direct activation of PR genes in rice

description: Table S2. Differentially expressed genes in OsWRKY67 overexpressing plants by RNA-seq analysis. (XLSX 26 kb)