cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23599878.v1
title: Supplementary file for "Whole blood-based transcriptional risk score for nonobese type 2 diabetes predicts dynamic changes in glucose metabolism"

description: <strong>Supplemental Material</strong> <strong>Title:</strong> Whole blood-based transcriptional risk score for nonobese type 2 diabetes predicts dynamic changes in glucose metabolism <strong>Authors: </strong>Yanan Hou, Huajie Dai, Na Chen, Zhiyun Zhao, Qi Wang, Tianzhichao Hou, Jie Zheng, Tiange Wang, Mian Li, Hong Lin, Shuangyuan Wang, Ruizhi Zheng, Jieli Lu, Yu Xu, Yuhong Chen, Ruixin Liu, Guang Ning, Weiqing Wang, Yufang Bi, Jiqiu Wang, Min Xu <strong>Supporting information</strong> <strong>Table S1. </strong>Clinical characteristics of study participants. <strong>Table S2. </strong>Weights of 144 gene transcripts included in wb-TRS, ordered from most negative to most positive associated with nonobese type 2 diabetes. <strong>Table S3.</strong> Association of z-score normalized wb-TRS with cardiometabolic traits in initial cohort. <strong>Table S4. </strong>Receiver operator characteristic curves for prediction of nonobese type 2 diabetes. <strong>Table S5. </strong>Top30 Reactome pathways associated with genes in wb-TRS. <strong>Table S6.</strong> Used IVs for wb-TRS in initial cohort. <strong>Table S7. </strong>Transcriptional MR for causal relationships between gene transcripts included in wb-TRS and T2D in initial cohort. <strong>Table S8. </strong>Transcriptional MR for causal relationships between gene transcripts included in wb-TRS and T2D in AGEN. <strong>Fig S1. </strong>Flowchart of study participants selection. <strong>Fig S2. </strong>Cross-validation results for least absolute shrinkage and selection operator (LASSO) logistics-model for nonobese type 2 diabetes in training dataset. <strong>Fig S3.</strong> Violin plot of wb-TRS and gene transcripts most negatively (FUOM) and positively (RPF1) associated with nonobese type 2 diabetes. <strong>Fig S4. </strong>Stratified analysis. Data are odds ratio (OR) and 95% confidence interval (CI) calculated using multivariable logistic regression models. The results were adjusted for age, sex, body mass index, family history of diabetes, waist circumference, smoking and drinking status, education level, physical activity, systolic and diastolic blood pressure, total cholesterol, triglycerides, high-density and low-density lipoprotein cholesterol.
DOI: 10.6084/m9.figshare.3486503.v2
title: Functional and non-functional classes of peptides produced by long non-coding RNAs

description: Supplementary data for the article by Ruiz-Orera et al. (Functional and non-functional classes of peptides produced by long non-coding RNAs). It contains transcript assemblies for human (hsa) and mouse (mmu) - hsa_transcripts.gtf, mmu_transcripts.gtf - as well as mouse ORF sequences and genomic coordinates - total_orfs.fa, total_orfs.gtf<br><br>
DOI: 10.3535/67y-h81-f7f
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xd3-5wp-qa3
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25897729.v1
title: Fig 2 + Fig 6 + Fig S4 - Conditioned Media EVs

description: PDF data summaries (generated using the NanoFCM NanoAnalyzer) supporting the manuscript "Shining a Light on Fluorescent EV Dyes: Evaluating Efficacy, Specificity, and Suitability by Nano-Flow Cytometry" by Brealey, et al.Raw data are available upon request.
DOI: 10.25375/uct.10048469.v1
title: List of Presentations - PROTEA Workshop 2019

description: List of all available presentations given as part of the Inaugural <b>PROTEA</b> (<i>Partnerships for Children with Heart Disease in Africa</i>) Workshop hosted by the <b>Children’s Heart Disease Research Unit </b>under the directorship of A/Prof Liesl Zuhlke and in conjunction with the <b>Paediatric Cardiology Service of the Western Cape (13 - 16 March 2019)</b>. <br>A first in Africa, this workshop combined four events: a research methods workshop, a basic echocardiography (echo) workshop, two days of advanced echo as well as a rheumatic heart disease research think-tank. 130 delegates from 19 different countries representing all six continents attended the event, making it truly global and giving attendees the opportunity to meet and network with experts in the fields of rheumatic and congenital heart disease.<br>The above table contains the following information and links:<br><i>Number</i>: Number of presentation<i>Date</i>: Date of presentation<i>Series</i>: Basic Echo or Advanced Echo<i>Presentation Title</i>: Title of presentation<i>Presenter(s)</i>: Name of person who presented<i>Recording or Slides</i>: Indicates whether presentation is slide PDF or video MP4<i>DOI</i>: Lists the DOI to the presentation
DOI: 10.3535/33g-vap-m5x
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qfa-mwb-8hh
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.12083910.v1
title: TCGA Pan-Cancer clinical Data

description: TCGA Pan-Cancer clinical Data, including PATIENT_ID, OS_MONTHS, OS_STATUS
DOI: 10.6084/m9.figshare.12652313.v7
title: Plasmid Mash edge list (Table S3)

description: Pairwise Mash edge list for generating a plasmid network. Includes distance estimates and <i>p</i>-values.
DOI: 10.6084/m9.figshare.18515264.v1
title: 01_Processing_Commands_and_Logs

description: 16S rRNA analysis
DOI: 10.6084/m9.figshare.28551470.v1
title: S4 Date. Raw data for figure 7

description: Raw data for figure 7
DOI: 10.17632/6wxzx2p3pn
title: Data for: Significant impacts of pelagic clay on average chemical composition of subducting sediments: New insights from discovery of extremely rare-earth elements and yttrium-rich mud at Ocean Drilling Program Site 1149 in the western North Pacific Ocean

description: Table 1. Results of the bulk chemical analyses of samples obtained from ODP Site 1149. Table 2. Comparison of the average compositions between the previous study and this study.
DOI: 10.3535/bja-dpg-773
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fl5-26y-wqm
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26840638.v2
title: Main data

description: 用于创建数字的数据。
DOI: 10.6084/m9.figshare.4970744.v1
title: Picure Island Upper Petroglyph Panel East

description: This dataset contains solely the output of photogrammetric processing of aerial imagery captured in the Atures Rapids, Amazonas state, Venezuela in 2016. This model is of the eastern section of the upper panel on Picure Island.<br>A full contextualisation of this data and accompanying discussion is published in Antiquity:<br><br><br>The archive contains a Wavefront Object, which can be viewed in Blender. Alternative formats are available upon request. The input data is available in the archive "Atures Rock Art photography" as part of this collection.<br><br>The data was processed in Agisoft Photoscan Pro 1.3.1 with default settings, except for output texture size, which was set at 8196x2. The resulting model was scaled to benchmark photographs. The model units are in metres. <br>
DOI: 10.17632/8r6tr3r58y
title: Data for: Data on selected antimalarial drug resistance markers in Zambia

description: Blood spots were collected during the survey and analysed using polymerase chain reaction (PCR) followed by high resolution melt (HRM) for mutation associated with i) Sulfadoxine resistance in Plasmodium falciparum dihydrofolate reductase (Pfdhfr) ii) Ppyrimethamine resistance in P. falciparum dihydropteroate synthase (Pfdhps), and iii) lumefantrine resistance in P. falciparum multi-drug resistance gene 1 (Pfmdr1). Finally, artemisinin resistance
DOI: 10.3535/393-zf8-c93
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tfv-1zc-hnr
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.10052690.v1
title: MOESM2 of An in-depth multi-omics analysis in RLE-6TN rat alveolar epithelial cells allows for nanomaterial categorization

description: Additional file 2. Scaled data from proteomics and metabolomics that have been used for WGCNA.
DOI: 10.6084/m9.figshare.11948559.v2
title: Supplementary Material: Raw Data from the Longitudinal UX Evaluation

description: This technical report (TR) presents all the raw data we obtained during our longitudinal UX study.
DOI: 10.6084/m9.figshare.13177205.v1
title: Additive manufacture of porous ceramic proximal interphalangeal (PIP) joint implant: design and process optimization

description: The dataset includes the data for measuring the Archimedes method density and the compression testing of test samples printed with two different BSL.
DOI: 10.3535/3xk-3rn-6vz
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6cz-9w6-rmk
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13208231.v3
title: Model

description: This model is trained on the 1000 documents of VTKEL* dataset after fixing a minor bug.
DOI: 10.3535/1sb-m2v-48k
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/cc7-g9c-73f
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1254117.v7
title: Cytochrome P450 (CYP3A4) CHARMM heme parameter file with fixed missing hydrogens for Gromacs

description: The missing hydrogens were added to the heme in the file aminoacids.hdb.
DOI: 10.6084/m9.figshare.3454907.v1
title: Integrating streamer and ocean-bottom seismic data for sub-basalt imaging on the Atlantic Margin

description: <strong>ABSTRACT</strong> Stacked basalt flows cover much of the NW European continental margin, including potentially prospective sediments of the Faroes shelf. Such flows attenuate seismic energy, hindering sub-basalt structural imaging which is critical for both exploration and tectonic studies. Low-frequency, long-offset reflection surveys have yielded improved images below top basalt, while coincident ocean-bottom seismometer (OBS) data have mapped low velocity zones (LVZ) from tomographic inversion. Image correlation in a common depth domain is challenged by low spatial resolution of the tomographic image, the absence of turning rays in a LVZ and the lack of wide-angle arrivals in the reflection data. We integrate densely sampled reflection data with deep velocities from OBS data to give a common velocity model in a new, iterated, pre-stack depth-migration workflow using complementary constraints from the two datasets. The matched velocity model and depth image enable interpretation of (i) a uniform flood basalt sequence, 2–4 km thick beneath the Fugloy Ridge, with velocities correlating with those in the Lopra 1/1A borehole and (ii) a sub-basalt LVZ with chaotic reflections corresponding to sill-intruded, probably syn-rift sediments. Such a workflow could be extended to targets beneath high velocity salt or basalt and could provide constraints for 3D datasets.
DOI: 10.3535/0sm-y7x-wk4
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19714639.v1
title: Trial look-up table

description: Look-up table that shows the gait condition (i.e. speed, step length, step frequency, step width) for each trial number (1-33)
DOI: 10.3535/84k-cs0-n37
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/k5d-q0w-9b9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13090025.v1
title: Visaul_Textual_features_data

description: This pickle files consists of features of Visual and textual entities from VTKEL* dataset.
DOI: 10.6084/m9.figshare.4584331.v3
title: "Representing number in the real-time processing of agreement: Self-paced reading evidence from Arabic": Compressed data in RData format for direct download.

description: This compressed file contains only the processed data for our paper "Representing number in the real-time processing of agreement: Self-paced reading evidence from Arabic" for the Frontiers in Psychology special topic on "Encoding and Navigating Linguistic Representations in Memory" edited by Colin Phillips, Matthew Wagers, and Claudia Felser. <br>IMPORTANT: This contains only the compressed .RData file of the processed reaction time data to make it easier to download it directly from R, but it is quite large and may contain too many data structures that may not be of interest (~63 MB). Alternatively, we provide a smaller .csv file that may be more amenable for exploratory work. We use this file in our 2020 paper meta-analysis of Number and Gender agreement in MSA. The full reproducible package containing the raw data and analysis scripts that produce this file is available at the link below.
DOI: 10.17632/97s9fjn5bb
title: DEGAS_ST_proj

description: ST data preprocessed using DEGAS pipeline is included below, along with the digitized biopsies and autoencoder bottleneck embeddings used for analysis. "PatDat" and "PatLab" files are the TCGA gene expression and PFS data, respectively, also preprocessed using the DEGAS pipeline.
DOI: 10.3535/925-xbx-zff
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/e9n-3ha-xbz
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.11859210.v1
title: Real time domestic traffic into/out of Wuhan during chunyun

description: Real time daily heat index during 2020 chunyun. The conversion factor based on OTG calibrated historical Tencent mobility data is 138,412.0099 individuals per one unit of the heat index. Direction code 0 represents outbound traffic, and 1 represents inbound traffic.
DOI: 10.6084/m9.figshare.1272859.v12
title: A versatile phenotyping system and analytics platform reveals diverse temporal responses to water limitation in Setaria

description: Associated with DOI:X
DOI: 10.6084/m9.figshare.19243869.v2
title: Supplementary_Data_CommsBio.xlsx

description: Raw Data of the Experiment on Grandparental and Parental Diet Effects in Amblyseius Swirskii<br>
DOI: 10.3535/1n4-70j-nbx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/j6j-j66-kfs
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27711531.v1
title: Annotation files for Ormosia henryi genome assembly

description: Annotation files for Ormosia henryi genome assembly
DOI: 10.17632/8bck675bht
title: Identification of ICAT as an APC inhibitor, revealing Wnt-dependent inhibition of APC-Axin interaction

description: Adenomatous polyposis coli (APC) and Axin are core components of the beta-catenin destruction complex. How APC’s function is regulated and whether Wnt signaling influences the direct APC-Axin interaction to inhibit the beta-catenin destruction complex and not clear. Through a CRISPR screen of beta-catenin stability, we have identified ICAT, a polypeptide previously known to block beta-catenin-TCF interaction, as a natural inhibitor of APC. ICAT blocks beta-catenin-APC interaction and prevents beta-catenin-mediated APC-Axin interaction, enhancing stabilization of beta-catenin in cells harboring truncated APC or stimulated with Wnt, but not in cells deprived of a Wnt signal. Using ICAT as a tool to disengage beta-catenin-mediated APC-Axin interaction, we demonstrate that Wnt quickly inhibits the direct interaction between APC and Axin. Our study highlights an important scaffolding function of beta-catenin in the assembly of the destruction complex and suggests Wnt-inhibited APC-Axin interaction as a novel mechanism of Wnt-dependent inhibition of the destruction complex.
DOI: 10.17632/zmfkyv3mp9
title: Supporting data for MOLECULAR-CELL-D-18-00452R3

description: Unprocessed raw scans of Western blot data displayed in Figures 1A, 5D, 6A, 6I, S3B, S3E, S4A, and S4B in Mengwasser et al. 2019, MOLECULAR-CELL-D-18-00452R3
DOI: 10.3535/azd-rk7-q2g
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/m1n-kq9-e4w
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19130453.v1
title: The parameters of the IEEE-30 and Polish2383 bus system

description: The parameters of the IEEE-30 and Polish2383 bus system
DOI: 10.3535/8we-rfd-aeq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mj9-sn0-dqc
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1471659.v1
title: DICOM BSPG 2011 I 115

description: Supplementary dataset to Evers et al. 2015. Zip-Archive of DICOM data for BSPG 2011 I 115, posterior cervical vertebra of Sigilmassasaurus brevicollis. Scan parameters specified in original publication.
DOI: 10.6084/m9.figshare.22238989.v1
title: Effects of seed crystal concentration, pH, and stirring rate on ammonium sulfate crystallization under the action of ammonium nitrate

description: In order to explore the effect of ammonium nitrate on the crystallization of ammonium sulfate mother liquor, this paper selected crystal seed, pH and stirring rate as the influencing factors, and studied the changes of average particle size, morphology and phase structure of ammonium sulfate crystals under the action of ammonium nitrate. When the seed crystal concentration was 1%–2%, the solute growth of the mixed solution could effectively reduce the supersaturation during the evaporation process, and the crystal growth did not generate new crystal nuclei, interfering with the crystallization process. A pH value of 4–5 promotes solvent/crystal surface interaction and crystal surface growth, which is beneficial for obtaining high-quality crystals. At a stirring rate of 200–300 r/min, the nucleation rate and secondary nucleation were improved, which is conducive to solid–liquid separation.
DOI: 10.6084/m9.figshare.28491083.v1
title: shaul and allenby abt 6.60 pm (9.1. 2025)

description: This video data shows the passenger journey when using the 'path less travelled' using the lift to transfer from the street to the platform.
DOI: 10.3535/h4h-znr-bsg
title: Sikhote-Alin meteorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xg2-nzk-acw
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/3q4-kzc-m5q
title: Sikhote-Alin meteorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4qb-cmw-lly
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/7yl-ns9-jjh
title: †Atrypa Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jtv-347-fnk
title: Sikhote-Alin meteorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14785845.v1
title: Whole genome sequencing and identification of mutations in E. coli cultures after repeated disinfection with monochloramine

description: Determination of genome mutations in E. coli cultures evolved under repeated monochloramine, ferrate, or water treatment. Cultures were cultivated and regrown for 48h intervals up to 32 times with 60 min disinfection epiosdes in between each growth interval. The accompanying VCF file details the gene sequence variations in the ancestral and evolved culture genomes.<br>1- Ancestral cultures (round 1) are denoted as A0, B0, C0, D0, E0.<br>2- Replicate cultures evolved under monochloramine stress after 32 disinfection rounds are denoted as AH-C32, BH-C32. CH-C32, DH-C32, EH-C32.<br>3- Replicate cultures evolved under water treatment (controls) after 32 treatment rounds are denoted as AC-C32, BC-C32, CC-C32, DC-C32, EC-C32.<br>4- Replicate cultures evolved under ferrate stress after 12 treatment rounds are denoted as AF-C12, BF-C12, XF-C12 and after 32 treatment rounds AF-C32, BF-C32, XF-C32.<br>5- CP023383.fa: Escherichia coli strain 1223 chromosome (complete genome) used as a reference genome for mapping (FASTA file)
DOI: 10.6084/m9.figshare.17009831.v3
title: An alternative SCA1B product for GRACE-FO from 2018-06 to 2020-12

description: The GRACE-FO SCA1B data product is obtained by combining the SCA1A data and IMU1A data through the Kalman filter. The date of the solution is 2018.06-2020.12.
DOI: 10.3535/mh9-7h0-z9q
title: Sikhote-Alin meteorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.6552902.v1
title: Original Data.xlsx

description: It's the original data required by reviewer and for the figures included in the manuscript
DOI: 10.17632/pytbf4t9rv
title: III. Analytic approximations of radial orbitals for multiconfigurational Hartree-Fock computations

description: Title of program: EDD Catalogue Id: AAKW_v1_0 Nature of problem An analytic non-relativistic atomic multiconfigurational variational program. Central field integrals and non orthogonality between orbitals are accepted. The program makes it possible easily to determine approximate excited orbitals in order to have initial values for the numerical multiconfigurational (MCHF) program. ADAPTATION SUMMARY: Vol:Year:Page 16:1979:325 "0001 QFO" "IV. Approximation of numerical orbitals by Slater functions." J.J. Labarthe Note: adaptation instructions are contained in source code Versions of this program held in the CPC repository in Mendeley Data AAKW_v1_0; EDD; 10.1016/0010-4655(79)90038-9 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)