cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48597/ygve-s7h2
title: Measurement of Sulphate_total at Rörvik

description: Measurement of Sulphate_total at Rörvik
DOI: 10.48597/yhgn-medt
title: Measurement of Inorganics in precipitation at Velen

description: Measurement of Inorganics in precipitation at Velen
DOI: 10.48597/yk9u-ypeh
title: Measurement of Sulphate_total at Rörvik

description: Measurement of Sulphate_total at Rörvik
DOI: 10.48597/zf6h-um4f
title: Measurement of Nitrogen_dioxide at Bredkälen

description: Measurement of Nitrogen_dioxide at Bredkälen
DOI: 10.48597/zwjb-fd8p
title: Measurement of Inorganics in precipitation at Bredkälen

description: Measurement of Inorganics in precipitation at Bredkälen
DOI: 10.48597/zyyv-efhd
title: Measurement of Inorganics in precipitation at Velen

description: Measurement of Inorganics in precipitation at Velen
DOI: 10.48597/29ch-p6q7
title: Measurement of Lead at Campisabalos

description: Measurement of Lead at Campisabalos
DOI: 10.48597/2tnd-u433
title: Measurement of Inorganics in air and particle phase at Skreådalen

description: Measurement of Inorganics in air and particle phase at Skreådalen
DOI: 10.48597/33m4-sqwk
title: Measurement of Nitrogen_dioxide at Zeppelin mountain (Ny-Ålesund)

description: Measurement of Nitrogen_dioxide at Zeppelin mountain (Ny-Ålesund)
DOI: 10.15468/dl.9n29ua
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio lycopodioides Schltr."
 ]
}

 The dataset includes 41 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105795-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10664586
title: METIS case study PSHA:  openquake hdf5 output files for Conditional Spectra

description: This dataset contains all Conditional Spectra
DOI: 10.15468/dl.h8veev
title: Occurrence Download

description: A dataset containing 838 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Santolina benthamiana Jord. & Fourr."
 ]
}

 The dataset includes 838 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105797-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u8tm3a
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scilla platyphylla Baker"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105796-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10664585
title: METIS case study PSHA:  openquake hdf5 output files for Conditional Spectra

description: This dataset (V2) contains the disaggregation results, the hdf5 files for the Conditional Spectra are in V1
DOI: 10.5281/zenodo.10933161
title: RELEVANCE, PROBLEMS, AND SOLUTIONS OF ANEMIA IN PREGNANCY.
DOI: 10.5281/zenodo.10933162
title: RELEVANCE, PROBLEMS, AND SOLUTIONS OF ANEMIA IN PREGNANCY.
DOI: 10.5281/zenodo.10932901
title: METIS case study PSHA:  openquake hdf5 output files for Conditional Spectra

description: This dataset (V2) contains the disaggregation results, the hdf5 files for the Conditional Spectra are in V1
DOI: 10.15468/dl.xrdtcu
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scutellaria sevanensis Sosn. ex Grossh."
 ]
}

 The dataset includes 54 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105798-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mk3cme
title: Occurrence Download

description: A dataset containing 595561 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is USA.6_1"
 ]
}

 The dataset includes 595561 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105762-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vn5k5v
title: Occurrence Download

description: A dataset containing 199 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Arctostaphylos glandulosa Eastw."
 ]
}

 The dataset includes 199 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105799-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rp4y7j
title: Occurrence Download

description: A dataset containing 246 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rubus simplex Focke"
 ]
}

 The dataset includes 246 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105800-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p1ctkspp
title: Modelled Lake Powell releases and reservoir elevations under different alternative management scenarios

description: These data were compiled for/to modeling efforts for U.S. Bureau of Reclamation National Environmental Policy Act (NEPA) analyses for the Colorado River in Grand Canyon, Arizona. Objective(s) of our study were to create revised monthly Lake Powell elevations and outflows from Bureau of Reclamation Colorado River Mid-term Modeling System (CRMMS) traces that incorporate the alternatives in the sEIS documents and indicate when potential actions may occur and how that changes water movement and storage. These data represent monthly hydrologies for Lake Powell: inflow, outflow, and elevation forecasts for 2024-2027, as well as volumes of water in outflows for different water mangement strategies in NEPA supplemental environmental impact statement (sEIS) documents from the U.S. Bureau of Reclamation (USBOR). These data were collected in 2023 and 2024. These data were collected from the USBOR CRMMS and used by U.S. Geological Survey-Southwest Biological Science Center-Grand Canyon Monitoring & Research Center modeling. These data can be used to evaluate different water management strategy potential impacts to storage in Lake Powell.
DOI: 10.5281/zenodo.10933169
title: ОСОБЕННОСТИ  ФАРМАКОЛОГИЧЕСКОЙ  АКТИВНОСТИ ЭКСРАКТА СМОЛЫ FERULA TAJIKORUM
DOI: 10.5281/zenodo.10933170
title: ОСОБЕННОСТИ  ФАРМАКОЛОГИЧЕСКОЙ  АКТИВНОСТИ ЭКСРАКТА СМОЛЫ FERULA TAJIKORUM
DOI: 10.15468/dl.6j6e34
title: Occurrence Download

description: A dataset containing 135 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio lydenburgensis Hutch. & Burtt Davy"
 ]
}

 The dataset includes 135 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105802-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fzfwj8
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Selaginella rothertii Alderw."
 ]
}

 The dataset includes 17 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105801-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ku4ka5
title: Occurrence Download

description: A dataset containing 995 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Santolina canescens Lag."
 ]
}

 The dataset includes 995 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105805-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.suvnv4
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scilla pleiophylla Speta"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105804-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ymcyrq
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is one of (Ecuador, Peru, Colombia, Bolivia (Plurinational State of))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Prunus huantensis Pilg."
 ]
}

 The dataset includes 143 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105803-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fs38k3
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scutellaria shansiensis C.Y.Wu & H.W.Li"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105806-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5067/exabrgm029lu
title: Sounder SIPS: Suomi NPP CrIMSS Level 3 Specific Quality Control Gridded Daily SiFSAP V2
DOI: 10.5067/8qdncxuqcy91
title: Sounder SIPS: Suomi NPP CrIMSS Level 3 Specific Quality Control Gridded Monthly SiFSAP V2
DOI: 10.15468/dl.kxm4sv
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rubus siyuanensis S.S.Ying"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105807-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zuymmd
title: Occurrence Download

description: A dataset containing 185 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Balsamocarpon brevifolium Clos"
 ]
}

 The dataset includes 185 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105808-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cq48m9
title: Occurrence Download

description: A dataset containing 264 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio lyratus Forssk."
 ]
}

 The dataset includes 264 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105809-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k3nxdy
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Selaginella roxburghii (Hook. & Grev.) Spring"
 ]
}

 The dataset includes 282 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105810-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pq7h3j
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scilla pneumonanthe Speta"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105811-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3a6vye
title: Occurrence Download

description: A dataset containing 311 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scutellaria shikokiana Makino"
 ]
}

 The dataset includes 311 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105813-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8g5b4z
title: Occurrence Download

description: A dataset containing 13062 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Santolina chamaecyparissus L."
 ]
}

 The dataset includes 13062 records from 363 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105812-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bmbmfm
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is one of (Ecuador, Peru)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Prunus herthae Diels"
 ]
}

 The dataset includes 44 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105814-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m38k4u
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rubus slavonicus Király, Trávn. & Zíla"
 ]
}

 The dataset includes 10 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105815-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9pxfpm
title: Occurrence Download

description: A dataset containing 282 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Arctostaphylos glauca Lindl."
 ]
}

 The dataset includes 282 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105816-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.grenvz
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Selaginella royenii Alston"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105817-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e5rbpa
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Senecio mabberleyi C.Jeffrey"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105818-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a6rr3w
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scilla reuteri Speta"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105819-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10932803
title: OrgaMapper: A robust and easy-to-use workflow for analyzing organelle positioning

description: Eukaryotic cells are highly compartmentalized by a variety of organelles that carry out specific cellular processes. The position of these organelles within the cell is elaborately regulated and vital for their function. For instance, the position of lysosomes relative to the nucleus controls their degradative capacity and is altered in pathophysiological conditions. The molecular components orchestrating the precise localization of organelles remain incompletely understood. A confounding factor in these studies is the fact that organelle positioning is surprisingly non-trivial to address. E.g., perturbations that affect the localization of organelles often lead to secondary phenotypes such as changes in cell or organelle size. These phenotypes could potentially mask effects or lead to the identification of false positive hits. To uncover and test potential molecular components at scale, accurate and easy-to-use analysis tools are required that allow robust measurements of organelle positioning. 

Results

Here, we present an analysis workflow for the faithful, robust, and quantitative analysis of organelle positioning phenotypes. Our workflow consists of an easy-to-use Fiji plugin and an R Shiny App. These tools enable users without background in image or data analysis to (1) segment single cells and nuclei and to detect organelles, (2) to measure cell size and the distance between detected organelles and the nucleus, (3) to measure intensities in the organelle channel plus one additional channel, (4) to measure radial intensity profiles of organellar markers, and (5) to plot the results in informative graphs. Using simulated data and immunofluorescent images of cells in which the function of known factors for lysosome positioning has been perturbed, we show that the workflow is robust against common problems for the accurate assessment of organelle positioning such as changes of cell shape and size, organelle size and background.

Conclusion

OrgaMapper is a versatile, robust and easy-to-use automated image analysis workflow that can be utilized in microscopy-based hypothesis testing and screens. It effectively allows for the mapping of the intracellular space and thereby enables the discovery of novel regulators of organelle positioning.
DOI: 10.5281/zenodo.8128669
title: OrgaMapper: A robust and easy-to-use workflow for analyzing organelle positioning

description: Eukaryotic cells are highly compartmentalized by a variety of organelles that carry out specific cellular processes. The position of these organelles within the cell is elaborately regulated and vital for their function. For instance, the position of lysosomes relative to the nucleus controls their degradative capacity and is altered in pathophysiological conditions. The molecular components orchestrating the precise localization of organelles remain incompletely understood. A confounding factor in these studies is the fact that organelle positioning is surprisingly non-trivial to address. E.g., perturbations that affect the localization of organelles often lead to secondary phenotypes such as changes in cell or organelle size. These phenotypes could potentially mask effects or lead to the identification of false positive hits. To uncover and test potential molecular components at scale, accurate and easy-to-use analysis tools are required that allow robust measurements of organelle positioning. 

Results

Here, we present an analysis workflow for the faithful, robust, and quantitative analysis of organelle positioning phenotypes. Our workflow consists of an easy-to-use Fiji plugin and an R Shiny App. These tools enable users without background in image or data analysis to (1) segment single cells and nuclei and to detect organelles, (2) to measure cell size and the distance between detected organelles and the nucleus, (3) to measure intensities in the organelle channel plus one additional channel, (4) to measure radial intensity profiles of organellar markers, and (5) to plot the results in informative graphs. Using simulated data and immunofluorescent images of cells in which the function of known factors for lysosome positioning has been perturbed, we show that the workflow is robust against common problems for the accurate assessment of organelle positioning such as changes of cell shape and size, organelle size and background.

Conclusion

OrgaMapper is a versatile, robust and easy-to-use automated image analysis workflow that can be utilized in microscopy-based hypothesis testing and screens. It effectively allows for the mapping of the intracellular space and thereby enables the discovery of novel regulators of organelle positioning.
DOI: 10.5281/zenodo.8128670
title: OrgaMapper: A robust and easy-to-use workflow for analyzing organelle positioning

description: Eukaryotic cells are highly compartmentalized by a variety of organelles that carry out specific cellular processes. The position of these organelles within the cell is elaborately regulated and vital for their function. For instance, the position of lysosomes relative to the nucleus controls their degradative capacity and is altered in pathophysiological conditions. The molecular components orchestrating the precise localization of organelles remain incompletely understood. A confounding factor in these studies is the fact that organelle positioning is surprisingly non-trivial to address. E.g., perturbations that affect the localization of organelles often lead to secondary phenotypes such as changes in cell or organelle size. These phenotypes could potentially mask effects or lead to the identification of false positive hits. To uncover and test potential molecular components at scale, accurate and easy to use analysis tools are required that allow robust measurements of organelle positioning. Here, we present an analysis workflow for the faithful, robust, and quantitative analysis of organelle positioning phenotypes. Our workflow consists of an easy to use Fiji plugin and an R Shiny App. These tools enable users without background in image or data analysis to (1) segment single cells and nuclei and to detect organelles, (2) to measure cell size and the distance between detected organelles and the nucleus, (3) to measure intensities in the organelle channel plus one additional channel, and (4) to plot the results in informative graphs. Using simulated data and immunofluorescent images of cells in which the function of known factors for lysosome positioning has been perturbed, we show that the workflow is robust against common problems for the accurate assessment of organelle positioning such as changes of cell shape and size, organelle size and background.
DOI: 10.15468/dl.ekarmj
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Scutellaria shweliensis W.W.Sm."
 ]
}

 The dataset includes 15 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105820-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.