cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.60520/ieda/113483
title: Changes in mineral and leachate (major, minor, and boron isotope) composition during sequential extraction of authigenic carbonate

description: Boron geochemistry from biogenic carbonates offer valuable information about ocean pH and CO2 chemistry. However, application to geological carbonate deposits suffers from analytical difficulties in obtaining geochemical signals exclusively from the carbonate phase. Sequential leaching with reagents and acids has the potential to overcome such an issue. There is however little systematic investigation about the efficiency of sequential leaching in isolating carbonate-associated boron from siliciclastic matrix. Here, we developed a sequential leaching protocol and applied it to methane-derived-authigenic-carbonate samples. Using the leachate δ11B signatures, elemental composition, and mineral composition of residues, we show that the sequential leaching is able to improve the separation of boron from different phases. Buffered hydrogen peroxide removes organic matter and also some silicate phases resulting low δ11B values. Leaching with NH4Ac removes adsorbed boron though may also partially leach some carbonate phases. The first few leaching steps with diluted acetic acid dissolve carbonate phases. Depending on the sample type, these may also capture some remaining adsorbed boron from the preceding NH4Ac leaching. Once the adsorbed boron is completely removed, as indicated by the progressively higher δ11B values during the following acid leaching steps, representative carbonate composition can be derived. The accuracy of this protocol is demonstrated with leaching experiments using artificial deep sea coral carbonate and clay mixtures that give carbonate-associated δ11B within error of the pure coral value. Our results provide insights into characteristic signatures derived from silicates and organic matter that need to be considered in boron isotope analyses of impure marine carbonates.
DOI: 10.14284/633
title: Maritime Boundaries Geodatabase: Territorial Seas (12NM), version 4

description: Territorial Seas from the VLIZ Maritime Boundaries Geodatabase. Territorial seas are a belt of coastal waters extending at most 12 nautical miles (22.2 km; 13.8 mi) from the baseline (usually the mean low-water mark) of a coastal state.
description: In the Maritime Boundaries Geodatabase, Marine Regions makes available most of the maritime areas defined in the Law of the Sea Convention: Exclusive Economic Zones (EEZ), Territorial Seas (TS), Contiguous Zones (CZ), Internal Waters (IW) and Archipelagic Waters (AW).
DOI: 10.5281/zenodo.10633562
title: Data from "Intraseasonal sea level variability along the western coast of India simulated by an eddy-resolving ocean general circulation model"

description: Data used in "Intraseasonal sea level variability along the western coast of India simulated by an eddy-resolving ocean general circulation model" (Yamagami et al. 2024 submitted). 

This repository contains the following two files:



COCO-HR.zip: Outputs of the historical simulation for the eddy resolving ocean model

WIND0.zip: Outputs of the sensitivity experiment


Both zip files contain the experiment outputs shown below in netcdf format for the period 1993-2019.



"sho_yYYYY.nc": Daily sea level anomalies

"to_1x1_yYYYY.nc": Monthly sea temperature

"so_1x1_yYYYY.nc": Monthly salinity

"uo_1x1_yYYYY.nc": Monthly surface zonal velocity

"vo_1x1_yYYYY.nc": Monthly surface meridional velocity
DOI: 10.5281/zenodo.11015211
title: Data from: The Jive Verification System and its Transformative Impact on Weather Forecasting Operations

description: This repository contains the data used for the analysis in the paper “The Jive Verification System and its Transformative Impact on Weather Forecasting Operations” Loveday et al. 2024 to be submitted to the Bulletin of the American Meteorological Society (BAMS).
DOI: 10.5281/zenodo.13927379
title: TDFPS-Designer: an efficient toolkit for barcode design and selection in nanopore sequencing
DOI: 10.5281/zenodo.7311732
title: Reversal data during aggregation of Myxococcus xanthus

description: Reversal data of the bacterium Myxococcus xanthus duringthe formation of aggregates under starvation conditions. The data isseparated into two files based on whether an individual bacterium ismoving towards or away from the nearest aggregate. Space is measuredin micrometers and time in minutes. Each file includes the length oftime before the bacteria changes directions, the speed during thatperiod, the distance from the nearest aggregate, the bearing anglewith respect to that aggregate, and the local cellular density when abacterium starts moving in a new direction.This data was obtained by processing images from the Welch Lab atSyracuse University. These images are published in "Cell behaviorsunderlying Myxococcus xanthus aggregate dispersal" (DOI:https://doi.org/10.1128/msystems.00425-23). The associated dataset ishttps://zenodo.org/records/8166434.
DOI: 10.5441/001/1.dg3sm625
title: Data from: Longer days enable higher diurnal activity for migratory birds [rough-legged buzzards]

description: Pokrovsky I, Kölzsch A, Sherub S, Fiedler W, Glazov P, Kulikova O, Wikelski M, Flack A. 2021. Longer days enable higher diurnal activity for migratory birds. J Anim Ecol. doi:10.1111/1365-2656.13484
description: (1) Seasonal geophysical cycles strongly influence the activity of life on Earth because they affect environmental conditions like temperature, precipitation, and daylength. An increase in daylight availability during summer is especially enhanced when animals migrate along a latitudinal gradient. Yet, the question of how daylength (i.e. daylight availability) influences the activity patterns of long‐distance, latitudinal migrants is still unclear. (2) Here, we ask whether migration provides benefits to long‐distance migrants by enabling them to increase their diurnal movement activities due to an increase in daylight availability. To answer this question, we tested whether four vastly different species of long‐distance migratory birds--two arctic migrants and two mid‐latitude migrants--can capitalise on day length changes by adjusting their daily activity. (3) We quantified the relationship between daily activity (measured using accelerometer data) and day length, and estimated each species' daily activity patterns. In addition, we evaluated the role of day length as an ultimate driver of bird migration. (4) All four species exhibited longer activity periods during days with more daylight hours, showing a strong positive relationship between total daily activity and day length. The slope of this relationship varied between the different species, with activity increasing 1.5‐fold on average when migrating from wintering to breeding grounds. Underlying mechanisms of these relationships reveal two distinct patterns of daily activity. Flying foragers showed increasing activity patterns, i.e. their daytime activities rose uniformly up to solar noon and decreased until dusk, thereby exhibiting a season‐specific activity slope. In contrast, ground foragers showed a constant activity pattern, whereby they immediately increased their activity to a certain level and maintained this level throughout the day. (5) Our study reveals that long days allow birds to prolong their activity and increase their total daily activity. These findings highlight that daylight availability could be an additional ultimate cause of bird migration and act as a selective agent for the evolution of migration.
DOI: 10.6084/m9.figshare.24602349
title: The Supplementary Dataset of Systemwide energy return on investment in a sustainable transition towards net zero power systems.

description: This dataset covers CED analysis of power technologies, including power to e-methane. It is part of the article titled "Systemwide energy return on invested in a sustainable transition towards net zero power systems", Nature Communications, DOI: 10.1038/s41467-023-44232-9
DOI: 10.5281/zenodo.12675232
title: Data and software for "Rapid downwelling of tracer particles across the boundary layer and into the pycnocline at submesoscale ocean fronts"

description: Lagrangian float data and LES model results
DOI: 10.5281/zenodo.13208175
title: 1000 size simu_datasets

description: This compressed file contains the reference sequences used to generate the datasets with 1000 samples.
DOI: 10.1285/i24212113v7i2p39
title: Posttraumatic growth, health-related quality of life and subjective happiness among Great East Japan Earthquake survivors attending a community knitting program to perform acts of kindness

description: Yarn Alive (YA) is a non-profit organization that was started after the 2011 Great East JapanEarthquake to support women through a knitting group that provided social support, creativeexpression, and opportunities to practice acts of kindness. In this study, we examined whetherYA changed the level of posttraumatic growth (PTG), health-related quality of life (HRQOL),and subjective happiness as measured by the subjective happiness scale (SHS). We conducteda retrospective correlational study through administering a cross-sectional survey to 98 YAparticipants and 97 YA non-participants in May-July 2017. Questionnaires were received from72 YA participants (response rate=73.5%) and 63 non-participants (response rate=64.9%).Data was analyzed by conducting descriptive, correlational, and multiple linear regressionanalyses. Participation in the YA program was shown to have a positive impact on HRQOL(R2=.18, adjusted R2=.15, p«.0001) and SHS (R2=.07, adjusted R2=.05, p=.013), which ispositively correlated with time. Participants with a high school education or less seemed tobenefit more from the program than those with at least a college or university degree (R2=.18,adjusted R2=.15, p«.0001). We also found the spiritual domain of PTG to be higher amongYA participants (t=2.9, p=.004) and overall PTG to be positively associated with incrementalimpact experienced during the disaster (R2=.12, adjusted R2=.11, p«.0001). This study showsthat formal academia-led evaluation of grassroots community programs can yield informationthat may help direct resources to the most appropriate and acceptable programs by thecommunity and strengthen their implementation.
DOI: 10.13026/as7t-c445
title: MIMIC-IV-ED

description: MIMIC-ED is a large, freely available database of emergency department (ED)
admissions at the Beth Israel Deaconess Medical Center between 2011 and 2019.
As of MIMIC-ED v1.0, the database contains 448,972 ED stays. Vital signs,
triage information, medication reconciliation, medication administration, and
discharge diagnoses are available. All data are deidentified to comply with
the Health Information Portability and Accountability Act (HIPAA) Safe Harbor
provision. MIMIC-ED is intended to support a diverse range of education
initiatives and research studies.
DOI: 10.15139/s3/tdplwq
title: Replication Data for: Voter Approval of Bond Referendums: The Role of Bond Amount and Ballot Characteristics

description: Municipal and state governments are often constitutionally bound to ask voters to approve new government debt through voting on bond referendums. Generally, politicians expect voters to balk at higher cost bonds and be more willing to approve lower cost bonds. However, there is minimal research on how the amount of a bond affects voter support. We implement a survey experiment that presents respondents with hypothetical ballots, in which the cost of proposed bonds, the number of bonds on the ballot, and the order in which they are presented, are all randomized. Our results suggest that support is not responsive to the amount of the bond, even when the cost is well outside what is typical and within the bounds of what the government can afford. In contrast, we find other aspects of the ballot matter significantly more for bond referendum approval. The more bonds on the ballot and being placed lower on the ballot both reduce support significantly.
DOI: 10.15151/esrf-dc-1209919534
title: High-resolution diffraction data for GaTa4Se8

description: High-resolution powder XRD data were collected on GaTa4Se8 upon its low-temperature structural phase transition
DOI: 10.17188/1208347
title: Materials Data on GeO2 by Materials Project

description: GeO2 is Rutile structured and crystallizes in the tetragonal P4_2/mnm space group. The structure is three-dimensional. Ge4+ is bonded to six equivalent O2- atoms to form a mixture of edge and corner-sharing GeO6 octahedra. The corner-sharing octahedral tilt angles are 50°. There is four shorter (1.90 Å) and two longer (1.95 Å) Ge–O bond length. O2- is bonded in a distorted trigonal planar geometry to three equivalent Ge4+ atoms.
DOI: 10.17632/646pxxbxk2.1
title: 354-member dome structure Sap2000 files

description: Sap2000 files (using steel and aluminum materials) of the 354-member dome structure
DOI: 10.17632/w5z857k3cw.2
title: Evaluation of sugar content and erosive potential of commonly prescribed Orally Dispersible Tablets- An In vitro study

description: Drug class: Pharmacological classification
Generic name: Name of the drug
Duration: Based on the usage; Short term or long term
Trade name: Commercially available preparation name as marketed
pH: acidic potential
total sugar as per dose form of the tablet: It is total amount of sugar present in the tablet as dispensed. 
% sugar content: percentage sugar content per 100mg
% Titratable acidity: acidic potential of the tablet
DOI: 10.17909/dpx3-gv19
title: Data from TOI-1173 A b: The First Inflated Super-Neptune in a Wide Binary System
DOI: 10.18157/qogbasjan16
title: QoG Basic Dataset 2016
DOI: 10.21227/s3g7-st65
title: Retinal Fundus Multi-disease Image Dataset (RFMiD)

description: Retinal Fundus Multi-disease Image Dataset (RFMiD) consisting of a wide variety of pathological conditions.
DOI: 10.24381/cds.7e37c951
title: Seasonal forecast anomalies on single levels
DOI: 10.34724/casd.56.309.v1
title: Pratiques culturales sur les grandes cultures - 2006

description: Impact des pratiques agricoles sur l’environnement, les cultures interrogées sont notamment : le blé tendre, le blé dur, l’orge, le triticale, le maïs (grain et fourrage), le colza, le tournesol, le pois protéagineux, la betterave industrielle, la pomme de terre, les prairies temporaires, les prairies permanentes intensives et la canne à sucre. Les interventions culturales interrogées sont notamment : travaux du sol, apports de fumure organique et minérale, traitements phytosanitaires. En 2017, les données de l'enquête sur les pratiques culturales en prairies sont regroupées avec celles des pratiques culturales en grandes cultures, au sein des mêmes fichiers.
DOI: 10.5066/p13hyuwm
title: Data for experimental conservation translocations of an aquatic invertebrate (Gammarus lacustris) in Minnesota USA from years 2017-2020

description: The dataset accompanies the scientific article, "Experimental conservation translocations of an aquatic invertebrate (Gammarus lacustris) within prairie and forest-transitional wetlands". In this study, we conducted a before-after/control-impact experiment to test the efficacy of conservation translocation for re-establishing abundant populations of the freshwater amphipod Gammarus lacustris in years 2017-2020. Each site (n=19) comprised at least 2 wetland basins, generally with one basin receiving translocated G. lacustris from a local donor and the other serving as a nearby control basin. The dataset contains information about the sites and the number of amphipods and density of amphipods detected at each basin.
DOI: 10.5067/b0ghodhjlda8
title: AMSR2/GCOM-W1 surface soil moisture (LPRM) L3 1 day 10 km x 10 km ascending V001
DOI: 10.5067/uo3q64ctts1u
title: Aqua/AIRS L3 Daily Standard Physical Retrieval (AIRS-only) 1 degree x 1 degree V7.0
DOI: 10.5281/zenodo.10359685
title: Dataset for honey bee audio detection

description: The database contains recordings of bees and drones in wav format, without compression. The sampling frequency is 44.1kHz.
The database contains 10000 one-second recordings of bees and 1700 one-second recordings of drones.
DOI: 10.5281/zenodo.10523185
title: DATASET FOR:  A multimodal spectroscopic approach combining mid-infrared and near-infrared for discriminating Gram-positive and Gram-negative bacteria

description: Description:

This dataset comprises a comprehensive set of files designed for the analysis and 2D correlation of spectral data, specifically focusing on ATR and NIR spectra. It includes MATLAB scripts and supporting functions necessary to replicate the analysis, as well as the raw datasets used in the study. Below is a detailed description of the included files:





Data Analysis:



File Name: Data_Analysis.mlx

Description: This MATLAB Live Script file contains the main script used for the classification analysis of the spectral data. It includes steps for preprocessing, analysis, and visualization of the ATR and NIR spectra.





2D Correlation Data Analysis:



File Name: Data_Analysis_2Dcorr.mlx

Description: This MATLAB Live Script file is similar to the primary analysis script but is specifically tailored for performing 2D correlation analysis on the spectral data. It includes detailed steps and code for executing the 2D correlation.





Functions:



Folder Name: Functions

Description: This folder contains all the necessary MATLAB function files required to replicate the analyses presented in the scripts. These functions handle various preprocessing steps, calculations, and visualizations.





Datasets:



File Names: ATR_dataset.xlsx, NIR_dataset.xlsx, Reference_data.csv

Description: These Excel files contain the raw spectral data for ATR and NIR analyses, as well as reference datasets. Each file includes multiple sheets with detailed measurements and metadata.




Usage Notes:



Software Requirements:



MATLAB is required to run the .mlx files and utilize the functions.

PLS_Toolbox: Necessary for certain preprocessing and analysis steps.

MIDAS 2010: Available at MIDAS 2010, required for the 2D correlation analysis.



Replication: Users can replicate the analyses by running the Data_Analysis.mlx and Data_Analysis_2Dcorr.mlx scripts in MATLAB, ensuring that the Functions folder is in the MATLAB path.

Data Handling: The datasets are provided in .xlsx format, which can be easily imported into MATLAB or other data analysis software.
DOI: 10.5281/zenodo.10775745
title: Quantifying the Role of EMIC Wave Scattering During the 27 February 2014 Storm by RAM-SCB Simulations

description: RAM_inputs_201402RBe_and_RCp.h5 contains the initial conditions derived based on the Van Allen Probes' measurements for the RAM-SCB model.

RAM_output_flux.zip includes the simulated omni-directional flux and differential fluxes by without including EMIC waves (woEMIC), with including EMIC waves (wEMIC), with only including He-band EMIC waves (onlyHe), and with only including H-band EMIC waves (onlyHy) along Van Allen Probe B's orbit.

Bw_AL3.zip includes the statistical EMIC wave amplitude under very disturbed geomagnetic conditions.

Daa.zip contains the calculated pitch angle diffusion coefficients on 20 and 23 UT of February 27 for both electrons and protons.

Precipitating_eandp_flux.zip consists of the simulated precipitating fluxes for both radiation belt electrons and ring current protons on 23 UT of February 27.
DOI: 10.5281/zenodo.11191726
title: Supplementary Table S1
DOI: 10.5281/zenodo.11372033
title: SPT-3G 2019-2022 flaring star lightcurves

description: Associated data with https://arxiv.org/abs/2401.13525: Flaring Stars in a Non-targeted mm-wave Survey with SPT-3G

We present lightcurves of flaring stars detected by the South Pole Telescope (SPT) from 2019 through 2022. There are two datasets: four year lightcurves of single-observation (long cadence) data as well as ~30 minute lightcurves of single-scan (short cadence) data during flaring peaks. SPT-3G is the third generation camera on the SPT, and observes at three bands centered at 95, 150, and 220 GHz. The main SPT-3G observing field covers a 1500-square-degree region of the sky from 20h40m0s to 3h20m0s in right ascension and -42 to -70 degrees in declination.

A full description of the data, and associated catalog, can be found at https://pole.uchicago.edu/public/data/tandoi24/
DOI: 10.5281/zenodo.13144517
title: Relativistic Electron Precipitation Events (driven by waves or field line scattering) from POES 2-second data

description: This repository contains the list of relativistic electron precipitation from POES data since 2012.

Please refer to the read_me file for further details.

 

You are free to use this for your research. However, before doing so, please contact Luisa Capannolo at luisacap@bu.edu.

 

This dataset is associated with the paper under review titled "Properties of Relativistic Electron Precipitation: A Comparative Analysis of Wave-Induced and Field Line Curvature Scattering Processes" by Capannolo, Staff, Li, Duderstadt, Sivadas, Petitt, Elliot, Qin, Shen, and Ma.
DOI: 10.5281/zenodo.13621615
title: Dataset for publication: Statistically Equivalent Virtual Microstructures for Modeling of Complex Polycrystalline Alloys Using a Generative Adversarial Network (GAN)-Enabled Computational Platform

description: This dataset provides the necessary data to get the images and results shown in the paper "Statistically Equivalent Virtual Microstructures for Modeling of Complex Polycrystalline Alloys Using a Generative Adversarial Network (GAN)-Enabled Computational Platform". 

Source Data Raw.zip has the entire data set used to generate the images.

Source Data.zip contains the processed data  from "Source Data Raw.zip".   

Files with extension .dream3d are accompained by a file with extension .xdmf. This files can be opened with Paraview. And their data can be accesible using python or matlab.

For more information contact Proffesor Somnath Ghosh at Johns Hopkins University, Civil and Systems Engineering Department.
DOI: 10.5281/zenodo.13713036
title: Data Repository: Cryptic degassing and protracted greenhouse climates after flood basalt events

description: Ref: Black et al. Cryptic degassing and protracted greenhouse climates after flood basalt events

Model inputs and outputs associated with this work including co-eruptive and cryptic degassing fluxes and SCION outputs. The model codes are available as follows: The ASPECT geodynamic model can be downloaded at https://aspect.geodynamics.org . The SCION model is freely available at https://github.com/bjwmills/SCION . The 1d diffusion model used to model magmatically induced crustal rheological shifts is freely available at  https://github.com/leifkarlstrom/reverse_energy_cascade.

File descriptions are provided below and in the readme.

carbon_melt_envelopes.txt

CO2 and melt generation envelopes generated from ASPECT geodynamic modeling of plume melting. CO2 envelope is used as an input to SCION representing potential cryptic degassing. Columns (also indicated in header of file) are:# 1: Time (Myr)# 2: MIN Carbon flux (mol/yr)# 3: MAX Carbon Flux (mol/yr)# 4: MIN Melt flux (km3/yr)# 5: MAX Melt flux (km3/yr)

SCION_cryptic_degassing.mat

A MATLAB file repository with individual SCION runs for a range of LIP eruptive and non-eruptive degassing scenarios as shown in Fig. 2 of Black et al.

File names are [LIP degassing rate choice]_[cryptic degassing rate choice] and the variables you want are 'time_myr' for time and 'tempC' for global avg surface temp and 'SAT_tropical' for tropical surface air temperature (for the PTME comparison). Python can read these files too.

SCION_null.mat

A MATLAB file repository with the null SCION run, including LIP weathering but no LIP CO2 release.

Table S1 - Degassing reconstructions.xlsx

Spreadsheet containing estimated co-eruptive CO2 fluxes for a range of scenarios for the Siberian Traps, Deccan Traps, NAIP, Ethiopian Traps, and CRB: volcanic CO2, intrusive + volcanic CO2 for specified intrusive:extrusive ratios, and for the Siberian Traps and NAIP, metamorphic + intrusive + volcanic CO2.

Table S2 - Climate patterns after LIPs.docx

Table summarizing climate patterns after Phanerozoic continental LIPs for which data are available.