cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13385597.v1
title: Supplementary Material for: Two Novel Cases of Autosomal Translocations in the Horse: Warmblood Family Segregating t(4;30) and a Cloned Arabian with a de novo t(12;25)

description: We report 2 novel autosomal translocations in the horse. In Case 1, a breeding stallion with a balanced t(4p;30) had produced normal foals and those with congenital abnormalities. Of his 9 phenotypically normal offspring, 4 had normal karyotypes, 4 had balanced t(4p;30), and 1 carried an unbalanced translocation with tertiary trisomy of 4p. We argue that unbalanced forms of t(4p;30) are more tolerated and result in viable congenital abnormalities, without causing embryonic death like all other known equine autosomal translocations. In Case 2, two stallions produced by somatic cell nuclear transfer from the same donor were karyotyped because of fertility issues. A balanced translocation t(12q;25) was found in one, but not in the other clone. The findings underscore the importance of routine cytogenetic screening of breeding animals and animals produced by assisted reproductive technologies. These cases will contribute to molecular studies of translocation breakpoints and their genetic consequences in the horse.
DOI: 10.6084/m9.figshare.13117607.v1
title: Chemometric mapping of polychlorinated dibenzo-<i>p</i>-dioxin (PCDD) and dibenzofuran (PCDF) congeners from the Passaic River, NJ: Integrated application of RSIMCA, PVA, and t-SNE

description: Robust Independent Modelling of Class Analogy (RSIMCA) was applied to classify over 2,800 Passaic River sediment samples into seven groups or not assigned to any group after an initial screening of a 3,255 sample dataset. This multivariate statistical output was compressed from seven latent dimensions into two interpretable dimensions using t-Distributed Stochastic Neighbor Embedding (t-SNE) graphics. Polytopic Vector Analysis (PVA) was then used to identify distinct source end-members based on PCDD/F characteristics of the classified samples. Among several advantages, the integrated chemometrics approach 1) applies emerging data visualization tools in this “Big Data” era to retain the fidelity of high-dimensional data attributes of a chemical dataset spanning over two decades of sample collection; 2) employs a classification technique undisturbed by compositional outliers yet tracks those for subsequent investigations; 3) provides an intuitive reduced-dimensional data visualization map for the PVA mixing polytope solution; 4) fills a data gap in the contextual inventory of PCDD/F source dynamics in a complex river system; and 5) serves as a backdrop for further forensics investigations of the finer structure of less dominant point sources and potential upland source end-members in sediments. This tiered chemometrics strategy provides a strong weight-of-evidence approach to the interpretation of sediment data.
DOI: 10.6084/m9.figshare.13356179.v1
title: m6A_A_LC-MS-MS

description: m6A was quantitatively detected in mRNAs across mouse neurodevelopment in the cortex using LC-MS/MS.
DOI: 10.5281/zenodo.4326707
title: TheyBuyForYou Knowledge Graph data dump

description: Data dump of the Knowledge Graph (KG) for the TheyBuyForYou project in RDF format containing procurement data and company data (for matching suppliers) for the period January 2019 to November 2020. In addition to the KG data dump in RDF, we have also made available the source data input for the KG, i.e., procurement release data from OpenOpps and company data (for matching suppliers) from OpenCorporates in JSON format.
DOI: 10.6084/m9.figshare.13251743.v1
title: agnostosDB_a42ac58a-20200715

description: The agnostosDB+NCLDVs (a42ac58a-20200715) is an update of the agnostosDB (dbf02445-20200519) GC dataset, containing the giant virus sequences from 3,243 nucleocytoplasmic large DNA viruses (NCLDVs) metagenome-assembled genomes (MAGs).<br>The agnostosDB+NCLDVs contains 5,383,876 refined GC with a total of 336,135,923 predicted genes.<br>A description of the dataset files is available in the README.txt file.<br>
DOI: 10.5281/zenodo.4327075
title: Mizuki M_Table S1. Cumulative incidence days of subjective symptoms.

description: The Supplement Table.
DOI: 10.6084/m9.figshare.13385612
title: Datasets

description: File includes Raw and Processed data for <b>Effect of teaching leadership styles on the prevention of adolescence pregnancy: a case study from Universidad César Vallejo, Peru</b><b></b>
DOI: 10.6084/m9.figshare.13385612.v1
title: Datasets

description: File includes Raw and Processed data for <b>Effect of teaching leadership styles on the prevention of adolescence pregnancy: a case study from Universidad César Vallejo, Peru</b><b></b>
DOI: 10.5281/zenodo.4327081
title: Mizuki M_Table S1. Cumulative prevalence days of subjective acute gastrointestinal symptoms

description: The Supplement Table.
DOI: 10.5281/zenodo.4267612
title: Mizuki M_Table S1. Cumulative prevalence days of subjective acute gastrointestinal symptoms

description: The Supplement Table.
DOI: 10.5281/zenodo.4327051
title: Processed data for the sRNA landscape chapter

description: <strong>Processed data to be used in analyses related to the sRNA landscape. </strong> <strong>1) small RNA processed data from stem trichomes</strong>: 2020-12-03_results_small_rna_stem_trichomes.tar.gz Original small RNA-seq fastq files: available at https://doi.org/10.5281/zenodo.4105911 Software: small-rna-seq-pipeline v0.4.3 available at https://zenodo.org/record/3773230 <strong>2) small RNA processed data from bald stem, leaf primordium and leaf: </strong> xxxx === to be added === xxx <strong>3) mRNA-seq processed data (raw and scaled counts) from different tissues (stem trichomes, bald stem, leaf, leaf primordium): </strong> 20201117_snakemake_messenger_rnaseq_trichomes_and_other_tissues.tar.gz Original mRNA-seq fastq files: Stem trichomes of Moneymaker: dataset available here Stem trichomes of LA0716: dataset available here Stem trichomes of PI127826: dataset available here Bald stems, leaf primordia and leaves of Moneymaker, LA0716 and PI127826: datasets are available here. Samples S28 to S48 were used. Software: Snakemake RNA-seq release 0.3.4 raw_counts.parsed.tsv: contains the raw counts that can be used for differential expression analysis (e.g. with DESeq2). scaled_counts.tsv: contains counts that are scaled between samples. This can be used for heatmap creation or PCA analysis for instance. NOT for differential analysis. samples.tsv.: a file listing the fastq files analysed. config.yaml: a file that contains the parameters used when running the pipeline.
DOI: 10.5281/zenodo.4306053
title: GaiaDR2 RR Lyrae dataset from "Chemo-kinematics of the GaiaRR Lyrae: the halo and the disc" (Iorio&Belokurov,2020)

description: **V2 - UPDATED VERSION** The V1 table missed the ra and random_index columns. These have been added to the new version, no other modifications have been made on the file ***************************** The catalogue contains all the stars classified as RR Lyrae in GaiaDR2. In addition to the columns from the Gaia tables, there are additional columns related to the Iorio&Belokurov20 paper. The zip file contains: - Fits file with the dataset - Ascii file containing the description of the columns in the fits file If you have any question, write to me at giuliano.iorio.astro@gmail.con
DOI: 10.5281/zenodo.3972286
title: GaiaDR2 RR Lyrae dataset from "Chemo-kinematics of the GaiaRR Lyrae: the halo and the disc" (Iorio&Belokurov,2020)

description: **V2 - UPDATED VERSION** The V1 table missed the ra and random_index columns. These have been added to the new version, no other modifications have been made on the file ***************************** The catalogue contains all the stars classified as RR Lyrae in GaiaDR2. In addition to the columns from the Gaia tables, there are additional columns related to the Iorio&Belokurov20 paper. The zip file contains: - Fits file with the dataset - Ascii file containing the description of the columns in the fits file If you have any question, write to me at giuliano.iorio.astro@gmail.con
DOI: 10.6084/m9.figshare.13385474
title: Extended Data Set: The epidemiological, humanistic and economic burden of dog-mediated rabies in India_a systematic review protocol.pdf

description: This extended data included checklists for the protocol of a systematic review that attempts to measure the magnitude of the epidemiological, economic and humanistic burden of dog-mediated rabies in India<br>
DOI: 10.6084/m9.figshare.13385474.v1
title: Extended Data Set: The epidemiological, humanistic and economic burden of dog-mediated rabies in India_a systematic review protocol.pdf

description: This extended data included checklists for the protocol of a systematic review that attempts to measure the magnitude of the epidemiological, economic and humanistic burden of dog-mediated rabies in India<br>
DOI: 10.6084/m9.figshare.13370684
title: test4.zip

description: Fold 4 test set
DOI: 10.6084/m9.figshare.13370684.v2
title: test4.zip

description: Fold 4 test set
DOI: 10.6084/m9.figshare.13356179.v2
title: m6A/A_LC-MS-MS

description: m6A was quantitatively detected in mRNAs across mouse neurodevelopment in the cortex using LC-MS/MS. Both raw peak numbers and m6A/A% are provided.
DOI: 10.5283/epub.44241
title: Daten zur Dissertation "Quantum transport in HgTe topological insulator nanostructures"
DOI: 10.6084/m9.figshare.13356179
title: LC-MS-MS-peak file-m6A/A%

description: m6A was quantitatively detected in mRNAs across mouse neurodevelopment in the cortex using LC-MS/MS. Both raw peak numbers and m6A/A% are provided.
DOI: 10.6084/m9.figshare.13356179.v4
title: LC-MS-MS-peak file-m6A/A%

description: m6A was quantitatively detected in mRNAs across mouse neurodevelopment in the cortex using LC-MS/MS. Both raw peak numbers and m6A/A% are provided.
DOI: 10.6084/m9.figshare.13356179.v3
title: m6A/A_LC-MS-MS

description: m6A was quantitatively detected in mRNAs across mouse neurodevelopment in the cortex using LC-MS/MS. Both raw peak numbers and m6A/A% are provided.
DOI: 10.5281/zenodo.4327109
title: Thermal video

description: thermal vedio
DOI: 10.48366/r68121
title: Comparison of transient climate response (TCR) and equilibrium climate sensitivity (ECS) from historical warming in CMIP6 models

description: The “transient climate response” is defined as the global and annual mean surface air temperature anomaly in the 1pctCO2 scenario (1% CO2 increase per year) for a 20 year period centered at the time of CO2 doubling, i.e. using the years 61 to 80 after the start of the simulation. The temperature anomaly was calculated by subtracting a linear fit of the piControl run for all 140 years of the 1pctCO2 experiment prior to the TCR calculation (see https://doi.org/10.1029/2008JD010405). The “equilibrium climate sensitivity" is the higher long-term increase in global average temperature expected to occur after the effects of a doubled CO2 concentration have had time to reach a steady state.
DOI: 10.6084/m9.figshare.13264769.v1
title: agnostosDB_4eab867d-20201104

description: The dataset agnostosDB_4eab867d-20201104 constitutes an update of the agnostosDB+NCLDVs (a42ac58a-20200715) GC dataset, containing additional 10,207,435 eukaryotic plankton predicted gene sequences from 713 "SMAGs" (combination of 683 MAGs and 30 SAGs) (Delmont et al. 2020).<br>The agnostosDB+NCLDVs+Eukaryotic contains 6,572,081 refined GC with a total of 341,655,294 predicted genes.<br>A description of the dataset files is available in the README.txt file.<br><br>
DOI: 10.5525/gla.researchdata.1097
title: Alternative splicing and gene expression play contrasting roles in the parallel phenotypic evolution of a salmonid fish
DOI: 10.5281/zenodo.4327129
title: Behavioral data and analyses of competitive interactions between invasive and native ant species [from Cordonnier et al. 2021, Animals]

description: This README accompanies the files "data_Cordonnier_Animals.txt" & "script_Cordonnier_Animals.txt" Associated publication : The native ant <em>Lasius niger</em> can limit the access to resources of the invasive Argentine ant M. Cordonnier, O. Blight, E. Angulo, and F. Courchamp Published in <em>Animals</em> <br> ********************************** CONTENTS *****************************<br> The data are in table form with TABs as variables field delimiters so they can be readily imported in any statistical package or spreadsheet program. Please, contact me if you need the file formatted otherwise. *******************************************************************************<br> Variable names and descriptions Status_Lh status of Linepithema humile (Colonizer or Resident) opp species of the opponent combirc combination of status and species interacting temp temperature during the test hygro hygrometry during the test categ interacting species combination n_deadtot_opp total number of dead opponent workers t_50dead_opp time when 50% of the opponent mortality load have been diagnosed t_interact time of the first interaction between L. humile and opponent workers t_maxfights time when the maximal number of simultaneous fights occurs ET_fights standard deviation of the numbers of fights over time mean_fights mean number of simultaneous fights during the contest n_deadtot_Lh total number of dead workers of L. humile t_50dead_Lh time when 50% of the L. humile mortality load have been diagnosed t_arena_opp time of the opponent entrance in the arena t_bait_opp time of opponent resources’ discovery t_maxarena_opp time when the max. number of opponent workers occurs in the arena mean_arena_opp mean number of opponent workers simultaneously present in the whole arena t_maxbait_opp time when the maximal number of opponent workers on the bait occurs mean_bait_opp mean number of opponent workers on the bait t_arena_Lh time of the entrance in the arena of L. humile t_maxarena_Lh time when the max. number of workers of L. humile occurs in the arena mean_arena_Lh mean number of L. humile workers simultaneously present in the whole arena n_totprey_Lh total number of preys brought by L. humile t_bait_Lh time of resources’ discovery by L. humile t_maxbait_Lh time when the maximal number of L. humile individuals on the bait occurs ETbait_Lh standard deviation of the numbers of L. humile workers on the bait over time mean_bait_Lh mean number of L. humile workers on the bait t_50prey_Lh time when 50% of the final prey load ******************************** CONTACT *********************************<br> Please contact me at: Marion Cordonnier<br> e-mail: marion.cordonnier@hotmail.com *******************************************************************************
DOI: 10.5281/zenodo.4327128
title: Behavioral data and analyses of competitive interactions between invasive and native ant species [from Cordonnier et al. 2021, Animals]

description: This README accompanies the files "data_Cordonnier_Animals.txt" & "script_Cordonnier_Animals.txt" Associated publication : The native ant <em>Lasius niger</em> can limit the access to resources of the invasive Argentine ant M. Cordonnier, O. Blight, E. Angulo, and F. Courchamp Published in <em>Animals</em> <br> ********************************** CONTENTS *****************************<br> The data are in table form with TABs as variables field delimiters so they can be readily imported in any statistical package or spreadsheet program. Please, contact me if you need the file formatted otherwise. *******************************************************************************<br> Variable names and descriptions Status_Lh status of Linepithema humile (Colonizer or Resident) opp species of the opponent combirc combination of status and species interacting temp temperature during the test hygro hygrometry during the test categ interacting species combination n_deadtot_opp total number of dead opponent workers t_50dead_opp time when 50% of the opponent mortality load have been diagnosed t_interact time of the first interaction between L. humile and opponent workers t_maxfights time when the maximal number of simultaneous fights occurs ET_fights standard deviation of the numbers of fights over time mean_fights mean number of simultaneous fights during the contest n_deadtot_Lh total number of dead workers of L. humile t_50dead_Lh time when 50% of the L. humile mortality load have been diagnosed t_arena_opp time of the opponent entrance in the arena t_bait_opp time of opponent resources’ discovery t_maxarena_opp time when the max. number of opponent workers occurs in the arena mean_arena_opp mean number of opponent workers simultaneously present in the whole arena t_maxbait_opp time when the maximal number of opponent workers on the bait occurs mean_bait_opp mean number of opponent workers on the bait t_arena_Lh time of the entrance in the arena of L. humile t_maxarena_Lh time when the max. number of workers of L. humile occurs in the arena mean_arena_Lh mean number of L. humile workers simultaneously present in the whole arena n_totprey_Lh total number of preys brought by L. humile t_bait_Lh time of resources’ discovery by L. humile t_maxbait_Lh time when the maximal number of L. humile individuals on the bait occurs ETbait_Lh standard deviation of the numbers of L. humile workers on the bait over time mean_bait_Lh mean number of L. humile workers on the bait t_50prey_Lh time when 50% of the final prey load ******************************** CONTACT *********************************<br> Please contact me at: Marion Cordonnier<br> e-mail: marion.cordonnier@hotmail.com *******************************************************************************
DOI: 10.6084/m9.figshare.13264769.v2
title: agnostosDB_4eab867d-20201104

description: The dataset agnostosDB_4eab867d-20201104 constitutes an update of the agnostosDB+NCLDVs (a42ac58a-20200715) GC dataset, containing additional 10,207,435 eukaryotic plankton predicted gene sequences from 713 "SMAGs" (combination of 683 MAGs and 30 SAGs) (Delmont et al. 2020).<br>The agnostosDB+NCLDVs+Eukaryotic contains 6,572,081 refined GC with a total of 341,655,294 predicted genes.<br>A description of the dataset files is available in the README.txt file.<br><br>
DOI: 10.6084/m9.figshare.13385933
title: GYS.wmv

description: Gastroyeyunostomy video
DOI: 10.6084/m9.figshare.13385933.v1
title: GYS.wmv

description: Gastroyeyunostomy video
DOI: 10.34740/kaggle/dsv/1751667
title: US counties COVID 19 dataset
DOI: 10.5281/zenodo.4327132
title: Processed data for the sRNA landscape chapter

description: <strong>Processed data to be used in analyses related to the sRNA landscape. </strong> <strong>1) small RNA processed data from stem trichomes</strong>: 2020-12-03_results_small_rna_stem_trichomes.tar.gz Original small RNA-seq fastq files: available at https://doi.org/10.5281/zenodo.4105911 Software: small-rna-seq-pipeline v0.4.3 available at https://zenodo.org/record/3773230 <strong>2) small RNA processed data from bald stem, leaf primordium and leaf: </strong> xxxx === to be added === xxx <strong>3) mRNA-seq processed data (raw and scaled counts) from different tissues (stem trichomes, bald stem, leaf, leaf primordium): </strong> 20201117_snakemake_messenger_rnaseq_trichomes_and_other_tissues.tar.gz Original mRNA-seq fastq files: Stem trichomes of Moneymaker: dataset available here Stem trichomes of LA0716: dataset available here Stem trichomes of PI127826: dataset available here Bald stems, leaf primordia and leaves of Moneymaker, LA0716 and PI127826: datasets are available here. Samples S28 to S48 were used. Software: Snakemake RNA-seq release 0.3.4 raw_counts.parsed.tsv: contains the raw counts that can be used for differential expression analysis (e.g. with DESeq2). scaled_counts.tsv: contains counts that are scaled between samples. This can be used for heatmap creation or PCA analysis for instance. NOT for differential analysis. samples.tsv.: a file listing the fastq files analysed. config.yaml: a file that contains the parameters used when running the pipeline.
DOI: 10.5285/c1e5c98d-be91-4c6f-96a7-ce27bc2a37ad
title: Hydrogeological Maps of Scotland version 2

description: The BGS Hydrogeological Maps of Scotland data product is comprised of three datasets: Bedrock Aquifer Productivity (Scotland); Superficial Aquifer Productivity (Scotland); and Groundwater Vulnerability (Scotland).
Aquifer productivity is a measure of the potential of aquifers to sustain a borehole water supply. The Aquifer Productivity (Scotland) datasets indicate the location and productivity of bedrock and superficial aquifers across Scotland, and their groundwater flow characteristics.  The Groundwater Vulnerability (Scotland) dataset shows the relative vulnerability of groundwater to contamination across Scotland.  
The BGS Hydrogeological Maps of Scotland data product is developed as a tool to support groundwater resource management. It may be useful to anyone interested in learning more about, assessing or managing groundwater resources across Scotland. 
The datasets within the product are delivered at 1: 100 000 scale.
DOI: 10.6084/m9.figshare.13385642
title: train3.zip

description: Fold 3 train set
DOI: 10.6084/m9.figshare.13385642.v1
title: train3.zip

description: Fold 3 train set
DOI: 10.25934/00003649.0
title: Available IPD datapackage for study 'Lux-Breast 3; Randomised Phase II Study of Afatinib Alone or in Combination With Vinorelbine Versus Investigator's Choice of Treatment in Patients With HER2 Positive Breast Cancer With Progressive Brain Metastases After Trastuzumab and/or Lapatinib Based Therapy'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00003649.1
title: IPD datapackage for study 'Lux-Breast 3; Randomised Phase II Study of Afatinib Alone or in Combination With Vinorelbine Versus Investigator's Choice of Treatment in Patients With HER2 Positive Breast Cancer With Progressive Brain Metastases After Trastuzumab and/or Lapatinib Based Therapy' and research request: 'Predictors of therapeutic and adverse effects of medicines used in the treatment of breast cancer'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.5519/qd.xuhv3b78
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (15 records)