cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19793475.v1
title: Additional file 1 of Homologous recombination deficiency (HRD) can predict the therapeutic outcomes of immuno-neoadjuvant therapy in NSCLC patients

description: Additional file 1: Supplementary Tables. Table S1. The clinicopathologic characteristics of the 14 patients received immuno-neoadjuvant therapy. Table S2. Details of the public cohorts for HRD event validation.
DOI: 10.5281/zenodo.10688705
title: Physics lab dataset

description: Data collected during physics laboratory at the University
DOI: 10.5281/zenodo.10688706
title: Physics lab dataset

description: Data collected during physics laboratory at the University
DOI: 10.5281/zenodo.10688686
title: Dataset related to article: DISTINCTIVE ELECTRO‑CLINICAL, NEUROIMAGING AND HISTOPATHOLOGICAL FEATURES OF TEMPORAL ENCEPHALOCELES ASSOCIATED TO EPILEPSY

description: 3 XLSX: clinical-neurofisio-RM, Radiology TLE controlli, tabella controlli TLE Ia - 2016-2018
DOI: 10.5281/zenodo.10688687
title: Dataset related to article: DISTINCTIVE ELECTRO‑CLINICAL, NEUROIMAGING AND HISTOPATHOLOGICAL FEATURES OF TEMPORAL ENCEPHALOCELES ASSOCIATED TO EPILEPSY

description: 3 XLSX: clinical-neurofisio-RM, Radiology TLE controlli, tabella controlli TLE Ia - 2016-2018
DOI: 10.48437/02.2024.k.9600.01
title: Modellversuche zur Schadensentwicklung am Deckwerk
title: Modellversuche Wellengrube

description: Es handelt sich um Daten aus Modellversuchen in einer Wellengrube, welche in den Jahren 2018 und 2019 primär zur Beschreibung der Schadensentwicklung an losen Schüttsteindeckwerken durchgeführt wurden. Es sind Messungen der hydraulischen Einwirkungen (Wellen und Strömungen) sowie Scanneraufnahmen vom Deckwerk nach jedem Belastungszyklus vorhanden.
DOI: 10.6084/m9.figshare.25260280
title: hgdp_wgs.20190516.full.chr21.vcf.gz

description: human genome
DOI: 10.6084/m9.figshare.25256917
title: معادلة توزيع الأزمنه لتقنين الشدة والحجم والتكرار و الكثافة ضمن جداول وحدة التدريب الرياضي

description: معادلة توزيع الأزمنه لتقنين الشدة والحجم والتكرار و الكثافة ضمن جداول وحدة التدريب الرياضي حيث قام الباحثان بأبتكار وتطوير معادلة لتوزيع الأزمنه (شدة و حجم وتكرار و كثافة "راحة") داخل جدول الوحدة التدريبية Equation of time distribution to ration intensity, volume, repetition and intensity within the sports training unit schedules<br>
DOI: 10.6084/m9.figshare.24777990
title: EEG data during propofol anesthesia and a biophysical model of the EEG spectral trend.

description: <b>Publication</b>Brake, N., Duc, F., Rokos, A. <i>et al.</i> A neurophysiological basis for aperiodic EEG and the background spectral trend. <i>Nat Commun</i> <b>15</b>, 1514 (2024). https://doi.org/10.1038/s41467-024-45922-8.<b>Data description</b>spectrogram_Cz_all_subjects contains EEG recordings from 14 patients undergoing an infusion of the drug propofol as .csv files. This dataset contains the computed spectrogram of each patient from the Cz recording electrode. Time is encoded relative to the moment of loss of consciousness, i.e. LOC occurs at 0 s.manuscript_source_data contains all the data required to reproduce manuscript figures using the code at https://doi.org/10.5281/zenodo.10359818.
DOI: 10.25345/c5280591g
title: MassIVE MSV000094142 - Seven marine Actinomycetota from the South Pacific
title: Crude extracts from seven marine actinobacteria. Strains were cultured for seven days at 30 C in a shaker in three media: ISP2-ASW, R5A, and A1BFe+C. Extracts were prepared extracting twice with ethyl acetate 1:1. Data was collected by Dr. Nestor Serna in Collaboration with Dr. Alesis Tietze at the Department of Chemistry and Molecular Biology at the University of Gothenburg, Sweden.
DOI: 10.5281/zenodo.10688501
title: Grant Files Chiral Cages
DOI: 10.5281/zenodo.10688502
title: Grant Files Chiral Cages
DOI: 10.5281/zenodo.10067474
title: NSSL Mobile Hurricane Soundings

description: Mobile sounding observations collected in Hurricanes Harvey, Irma, Florence, Dorian, Laura, Ida, and Ian (2017, 2017, 2018, 2019, 2020, 2021, and 2022 respectively) from an NSSL Mobile Mesonet vehicle. Files provided are CSV files There is also a readme file that describes the data format for each file and the steps taken to produce that file.
DOI: 10.5281/zenodo.3236345
title: Data from: Hitting reset on sediment toxicity: Sediment homogenization alters the toxicity of metal‐amended sediments

description: Laboratory testing of sediments frequently involves manipulation by amendment with contaminants and homogenization, which changes the physicochemical structure of sediments. These changes can influence the bioavailability of divalent metals, and field and mesocosm experiments have shown that laboratory-derived thresholds are often overly conservative. We assessed the mechanisms that lead to divergence between laboratory- and field-derived thresholds; specifically, we assessed the importance of slow equilibration to solid-phase ligands and vertical stratification. To mimic natural physicochemical conditions, we uniquely aged sediment with a flow-through exposure system. These sediments were then homogenized and compared, toxicologically, with freshly metal-amended sediments in a 28-d chronic toxicity bioassay with the amphipod Hyalella azteca. We assessed concentration–response relationships for 3 metals (copper, nickel, and zinc) and 5 geochemically distinct sediments. We observed minimal differences in growth and survival of H. azteca between aged and freshly spiked sediments across all sediments and metals. These trends suggest that a loss of toxicity observed during long-term sediment aging is reversed after sediment homogenization. By comparison with mesocosm experiments, we demonstrate that homogenizing sediment immediately before toxicity assays may produce artificially high toxicity thresholds. We suggest that toxicity assays with sediments that maintain vertical redox gradients are needed to generate field-relevant sediment metal toxicity thresholds.
DOI: 10.5281/zenodo.5764936
title: Data from: Hitting reset on sediment toxicity: Sediment homogenization alters the toxicity of metal‐amended sediments

description: Laboratory testing of sediments frequently involves manipulation by amendment with contaminants and homogenization, which changes the physicochemical structure of sediments. These changes can influence the bioavailability of divalent metals, and field and mesocosm experiments have shown that laboratory-derived thresholds are often overly conservative. We assessed the mechanisms that lead to divergence between laboratory- and field-derived thresholds; specifically, we assessed the importance of slow equilibration to solid-phase ligands and vertical stratification. To mimic natural physicochemical conditions, we uniquely aged sediment with a flow-through exposure system. These sediments were then homogenized and compared, toxicologically, with freshly metal-amended sediments in a 28-d chronic toxicity bioassay with the amphipod Hyalella azteca. We assessed concentration–response relationships for 3 metals (copper, nickel, and zinc) and 5 geochemically distinct sediments. We observed minimal differences in growth and survival of H. azteca between aged and freshly spiked sediments across all sediments and metals. These trends suggest that a loss of toxicity observed during long-term sediment aging is reversed after sediment homogenization. By comparison with mesocosm experiments, we demonstrate that homogenizing sediment immediately before toxicity assays may produce artificially high toxicity thresholds. We suggest that toxicity assays with sediments that maintain vertical redox gradients are needed to generate field-relevant sediment metal toxicity thresholds.
DOI: 10.60656/25b777e75c1b4735
title: Custom collection of categorize, classification, drizzle, ice water content, liquid water content, and model data from Andøya between 20 Feb and 16 Mar 2020
DOI: 10.6073/pasta/a03f37b09d8753a31839f1a22c5e65a4
title: Rubisco limited photosynthesis rates of Red mangrove leaves at Key Largo, Watson River Chickee, Taylor Slough, and Little Rabbit Key, South Florida (FCE) from July 2001 to August 2001

description: Determine the Rubisco limited carboxylation rates of red mangrove ( species Rhizophora mangle) leaves. This information will be used to model carbon sequestration by Red mangroves.
DOI: 10.5281/zenodo.2591571
title: Data from: Global patterns and drivers of ecosystem functioning in rivers and riparian zones

description: River ecosystems receive and process vast quantities of terrestrial organic carbon, the fate of which depends strongly on microbial activity. Variation in and controls of processing rates, however, are poorly characterized at the global scale. In response, we used a peer-sourced research network and a highly standardized carbon processing assay to conduct a global-scale field experiment in greater than 1000 river and riparian sites. We found that Earth’s biomes have distinct carbon processing signatures. Slow processing is evident across latitudes, whereas rapid rates are restricted to lower latitudes. Both the mean rate and variability decline with latitude, suggesting temperature constraints toward the poles and greater roles for other environmental drivers (e.g., nutrient loading) toward the equator. These results and data set the stage for unprecedented “next-generation biomonitoring” by establishing baselines to help quantify environmental impacts to the functioning of ecosystems at a global scale.
DOI: 10.5281/zenodo.2591572
title: Data from: Global patterns and drivers of ecosystem functioning in rivers and riparian zones

description: River ecosystems receive and process vast quantities of terrestrial organic carbon, the fate of which depends strongly on microbial activity. Variation in and controls of processing rates, however, are poorly characterized at the global scale. In response, we used a peer-sourced research network and a highly standardized carbon processing assay to conduct a global-scale field experiment in greater than 1000 river and riparian sites. We found that Earth’s biomes have distinct carbon processing signatures. Slow processing is evident across latitudes, whereas rapid rates are restricted to lower latitudes. Both the mean rate and variability decline with latitude, suggesting temperature constraints toward the poles and greater roles for other environmental drivers (e.g., nutrient loading) toward the equator. These results and data set the stage for unprecedented “next-generation biomonitoring” by establishing baselines to help quantify environmental impacts to the functioning of ecosystems at a global scale.
DOI: 10.5255/ukda-sn-856935
title: Psychopathic Traits and Empathy for Pain in Community Dwelling Participants, 2020-2023

description: This project that created these data proposed a solution-focused approach to identify the psychological processes that could be targeted to ensure that potential high-risk groups, such as men who view online child sexual exploitation material, but who have not committed contact sexual offences, do not abuse and harm children. The objectives of the project were to use tests of social-affective functioning and response inhibition, and physiological measures, to create a psychological profile that could distinguish between online-only and contact sexual offenders and help to identify the psychological processes that protect against contact sexual offending. Using an online experiment, participants living in the community were asked to provide ratings of valence and arousal for images showing individuals in painful and non-painful situations. Participants also completed a questionnaire measure of psychopathic traits. Higher levels of psychopathic traits were associated with differences in ratings of painful and neutral stimuli.
DOI: 10.5281/zenodo.10688788
title: Dataset related to article: A REAL-WORLD COMPARISON AMONG THIRD-GENERATION ANTISEIZURE MEDICATIONS: RESULTS FROM THE COMPARE STUDY

description: 2 XLSX: Progetto AED_Centro Besta_ DATA.4, Progetto AED_Centro Besta_ retrospettivo
DOI: 10.5281/zenodo.10688789
title: Dataset related to article: A REAL-WORLD COMPARISON AMONG THIRD-GENERATION ANTISEIZURE MEDICATIONS: RESULTS FROM THE COMPARE STUDY

description: 2 XLSX: Progetto AED_Centro Besta_ DATA.4, Progetto AED_Centro Besta_ retrospettivo
DOI: 10.6084/m9.figshare.11405697
title: MOESM8 of Genome-Wide Association Analysis of the Genetic Basis for Sheath Blight Resistance in Rice

description: Additional file 8 : Table S8. Results of a KEGG pathway enrichment analysis of sheath blight resistance putative functional genes.
DOI: 10.6084/m9.figshare.11405697.v1
title: MOESM8 of Genome-Wide Association Analysis of the Genetic Basis for Sheath Blight Resistance in Rice

description: Additional file 8 : Table S8. Results of a KEGG pathway enrichment analysis of sheath blight resistance putative functional genes.
DOI: 10.5255/ukda-sn-856943
title: Digitalisation, Dematerialisation and Decarbonisation of the Global Economy in Historical Perspective: The Relationship Between Energy and Information, 1850-2019

description: To better understand the processes of digitalisation, dematerialisation and decarbonisation, this paper examines the relationship between energy and information for the global economy since 1850. It presents the long run trends in energy intensity and communication intensity, as a proxy for total information intensity. The evidence suggests that, relative to GDP, global economic production has been reducing energy and increasing information use since 1913. The analysis indicates that it initially required little information to replace energy in production and that the ability to substitute away from energy and towards information has been declining. The result implies that the global economy is now reducing energy and increasing information at a substitution rate of 0.2 kB per kWh of conserved energy or 0.8 GB per tonne of carbon dioxide mitigated. As the price ratio of energy to information is currently higher than this marginal rate of substitution, there are incentives to further substitute information for energy. However, one conclusion is that (without the long run escalation of carbon prices) substitution away from energy and towards information is likely to cease within the next few decades and, beyond that, digitalisation will play a declining role in the decarbonisation process.
DOI: 10.13012/b2idb-6979965_v1
title: Data for "Niche conservatism and spread explain hybridization and introgression between native and invasive fish"

description: Data associated with the manuscript "Niche conservatism and spread explain hybridization and introgression between native and invasive fish" by Jordan H. Hartman, Joel B. Corush, Eric R. Larson, Jeremy S. Tiemann, Philip Willink, and Mark A. Davis. For this project, we combined results of ecological niche models (ENMs) and next-generation restriction site-associated DNA sequencing (RADseq) to test theories of niche conservatism and biotic resistance on the success of invasion, hybridization, and extent of introgression between native Western Banded Killifish and non-native Eastern Banded Killifish. This dataset provides the sampling locations and number of Banded Killifish in each population, accession numbers for RADseq from the National Center for Biotechnology Information Sequence Read Archive and the assignment of each Banded Killifish, the habitat associations of each population from the ENMs, and the occurrence points used to build the ENMs.
DOI: 10.5523/bris.2qzm2ou7z5i7b2rt3cb5auuugr
title: Discrimination of Ivory from Extant and Extinct Elephant Species using Raman Spectroscopy: A Potential Non-Destructive Technique for Combating Illegal Wildlife Trade
title: Ivory Insights

description: Raman spectroscopy data. 272 spectra were obtained from 8 Mammuthus primigenius samples, 203 spectra from Loxodonta spp. and 17 spectra were obtained from Elephas maximus.
DOI: 10.6084/m9.figshare.25260310
title: Delord et al. 2023. The challenges of independence: ontogeny of at-sea behaviour in a long-lived seabird. PCI in Ecology. https://doi.org/10.24072/pci.ecology.100405. Data, scripts and code.

description: Data and script supporting the results of the article Delord et al. 2023. The challenges of independence: ontogeny of at-sea behaviour in a long-lived seabird. PCI in Ecology. https://doi.org/10.24072/pci.ecology.100405.
DOI: 10.5281/zenodo.10602514
title: Road surface aerial photo training dataset

description: Training dataset for road surface classification on OpenNRW (https://www.geoportal.nrw) aerial imagery. Samples are pixel-wise labelled tiles over the are of the city of Bonn and its surroundings. The aerial photos are coming from the North Rhine-Westphalia geoportal (available at https://www.geoportal.nrw) and are licensed under the DE-DL Zero 2.0 license.

 

 

Contains three classes:

* 0: Non-road area* 1: Road with compact surface (asphalt, concrete, ...)* 2: Road with modular surface (sett, paving stone, ...)
DOI: 10.5281/zenodo.10602515
title: Road surface aerial photo training dataset

description: Training dataset for road surface classification on OpenNRW (https://www.geoportal.nrw) aerial imagery. Samples are pixel-wise labelled tiles over the are of the city of Bonn and its surroundings. The aerial photos are coming from the North Rhine-Westphalia geoportal (available at https://www.geoportal.nrw) and are licensed under the DE-DL Zero 2.0 license.

 

 

Contains three classes:

* 0: Non-road area* 1: Road with compact surface (asphalt, concrete, ...)* 2: Road with modular surface (sett, paving stone, ...)
DOI: 10.6073/pasta/2dc4fab65b1400d777fdfcde3197ceeb
title: Light limited carboxylation rates of Red mangrove leaves at Key Largo, Watson River Chickee, Taylor Slough, and Little Rabbit Key, South Florida (FCE) from July 2001 to August 2001

description: Our goal is to determine light limited carboxylation rates of red mangrove (specie sRhizophora mangle) leaves. This information will be used to model carbon sequestration by Red mangroves.
DOI: 10.5281/zenodo.10139660
title: WormBiome - Metadata file

description: This file is the metadata associated with all the genomic annotation curation in the Wormbiome collection.

The Wormbiome collection is an online database dedicated to centralizing all the information related to bacteria associated with C. elegans. More information on wormbiome.org
DOI: 10.5281/zenodo.10139661
title: WormBiome - Metadata file

description: This file is the metadata associated with all the genomic annotation curation in the Wormbiome collection.

The Wormbiome collection is an online database dedicated to centralizing all the information related to bacteria associated with C. elegans. More information on wormbiome.org
DOI: 10.6084/m9.figshare.12978795
title: Additional file 2 of Constitutively active androgen receptor supports the metastatic phenotype of endocrine-resistant hormone receptor-positive breast cancer

description: Additional file 1. Supplemental materials and methods: in vitro SUMOylation; RT-PCR; Luciferase reporter assays; PLA, mammosphere studies; scratch assays; transcriptomic data analysis. Table S1. List of primer sequences used for the detection of transcripts. Supplemental figures and figure legends: Figure S1. Elevated levels of SUMO isoforms and HSP27 correlate with high probability of metastasis in ET-treated HR+ BCa patients. Figure S2. HyperSUMO conditions promotes AR SUMOylation and enhances its interaction with Hsp27. Figure S3. SUMO stabilizes AR and reduces its proteasomal degradation. Figure S4. SUMO stimulates basal AR transcriptional activity regardless of the AR-luciferase reporter construct. Figure S5. Concurrent targeting of SUMO-modified and unmodified AR decreases TamR-7 BCa growth in 3D cultures.
DOI: 10.6084/m9.figshare.12978795.v1
title: Additional file 2 of Constitutively active androgen receptor supports the metastatic phenotype of endocrine-resistant hormone receptor-positive breast cancer

description: Additional file 1. Supplemental materials and methods: in vitro SUMOylation; RT-PCR; Luciferase reporter assays; PLA, mammosphere studies; scratch assays; transcriptomic data analysis. Table S1. List of primer sequences used for the detection of transcripts. Supplemental figures and figure legends: Figure S1. Elevated levels of SUMO isoforms and HSP27 correlate with high probability of metastasis in ET-treated HR+ BCa patients. Figure S2. HyperSUMO conditions promotes AR SUMOylation and enhances its interaction with Hsp27. Figure S3. SUMO stabilizes AR and reduces its proteasomal degradation. Figure S4. SUMO stimulates basal AR transcriptional activity regardless of the AR-luciferase reporter construct. Figure S5. Concurrent targeting of SUMO-modified and unmodified AR decreases TamR-7 BCa growth in 3D cultures.
DOI: 10.5066/p9eqfoxx
title: Stable isotope data for sulfur, oxygen, and hydrogen in minerals and gases and electron microprobe data for minerals from Sulphur Bank mercury mine, Lake County, California

description: Stable isotope compositions (the ratios deuterium/hydrogen, oxygen-18/oxygen-16, and sulfur-34/sulfur-32) are reported for alunite, jarosite, kaolinite, silica, cinnabar, marcasite, and native sulfur from outcrops in and around the workings of the Sulphur Bank mercury mine, Lake County, California, and chemical compositions are reported, from electron microprobe analyses, for alunite and buddingtonite. Isotope analyses are given also for hydrogen sulfide gas from active fumaroles and for soluble sulfate in samples of mine waste. The waste results reflect fine grained material (particles less than 0.063 millimeter in diameter) that were taken from composites, each composite representing a particular waste pile that was active during a particular period of mining.
DOI: 10.5281/zenodo.10688851
title: Dataset related to article: Adjunctive brivaracetam and sustained seizure frequency reduction in very active focal epilepsy

description: 1 XLSX: Database brivaracetam - 122019_Besta
DOI: 10.5281/zenodo.10688852
title: Dataset related to article: Adjunctive brivaracetam and sustained seizure frequency reduction in very active focal epilepsy

description: 1 XLSX: Database brivaracetam - 122019_Besta
DOI: 10.6084/m9.figshare.11405991
title: MOESM10 of The evolutionary history of the sucrose synthase gene family in higher plants

description: Additional file 10: Table S5. Expression patterns of Arabidopsis SUS genes under hypoxia. The expression data of six SUS genes in Arabidopsis comes from Gene Expression Omnibus (GEO) DataSets (GSE119327). We analyzed the expression of six SUS genes in Arabidopsis under hypoxia and found that only AtSUS1 and AtSUS4 were induced by hypoxia. adj. P.Val: P-value after adjustment for multiple testing. logFC: Log2-fold change between two experimental conditions.
DOI: 10.6084/m9.figshare.11405991.v1
title: MOESM10 of The evolutionary history of the sucrose synthase gene family in higher plants

description: Additional file 10: Table S5. Expression patterns of Arabidopsis SUS genes under hypoxia. The expression data of six SUS genes in Arabidopsis comes from Gene Expression Omnibus (GEO) DataSets (GSE119327). We analyzed the expression of six SUS genes in Arabidopsis under hypoxia and found that only AtSUS1 and AtSUS4 were induced by hypoxia. adj. P.Val: P-value after adjustment for multiple testing. logFC: Log2-fold change between two experimental conditions.
DOI: 10.5281/zenodo.10655811
title: Code for "On the ensemble Kalman inversion under inequality constraints"

description: This is the code used in the paper "On the ensemble Kalman inversion under inequality constraints" by Hanu, Matei and Weissman, Simon.
DOI: 10.5281/zenodo.10655812
title: Code for "On the ensemble Kalman inversion under inequality constraints"

description: This is the code used in the paper "On the ensemble Kalman inversion under inequality constraints" by Hanu, Matei and Weissman, Simon.