cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25504/fairsharing.ge8y23
title: FAIRsharing record for: Groundnut Ontology
title: CO_337

description: This FAIRsharing record describes:  The Groundnut Ontology is part of the Crop Ontology (CO) project. The Crop Ontology has been created to compile validated concepts along with their inter-relationships on anatomy, structure and phenotype of Crops, on trait measurement and methods as well as on Germplasm with the multi-crop passport terms. The concepts of the CO are being used to curate agronomic databases and describe the data. The use of ontology terms to describe agronomic phenotypes and the accurate mapping of these descriptions into databases is important in comparative phenotypic and genotypic studies across species and gene-discovery experiments as it provides harmonized description of the data and therefore facilitates the retrieval of information.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.j9e8qd
title: FAIRsharing record for: Protein Affinity Reagent Controlled Vocabulary
title: PSI-PAR CV

description: This FAIRsharing record describes:  The scopes of molecular interactions and protein affinity reagents are largely overlapping but are also partially unique. This fact is reflected in the PSI-PAR CV, which contains the majority of the terms from the PSI-MI CV and an additional ∼200 new terms as of its creation in 2009.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.qz30cx
title: FAIRsharing record for: GlycoCT sequence format for carbohydrates.
title: GlycoCT XML

description: This FAIRsharing record describes:  GlycoCT format is devised to describe the carbohydrate sequences, with a controlled vocabulary to name monosaccharides, adopting IUPAC rules to generate a consistent, machine-readable nomenclature, based on a connection table approach, instead of a linear encoding scheme. The format uses a block concept to describe frequently occurring special features of carbohydrate sequences like repeating units. It exists in two variants, a condensed form and a more verbose XML syntax. Sorting rules assure the uniqueness of the condensed form, thus making it suitable as a direct primary key for database applications, which rely on unique identifiers. GlycoCT encompasses the capabilities of the heterogeneous landscape of digital encoding schemata in glycomics and is thus a step forward on the way to a unified and broadly accepted sequence format in glycobioinformatics.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.frspdi
title: FAIRsharing record for: Artificial Nutrition Thesaurus
title: null

description: This FAIRsharing record describes:  This thesaurus is based on the vocabulary used in scientific publications for Artificial nutrition and neighbor fields. It contains more than 2500 concepts in two languages (English and French), including various variants (synonyms, acronyms) divided into a number of microthesauri where the terms are grouped around a theme or a semantic field.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.82t0w2
title: FAIRsharing record for: Leukocyte Surface Markers
title: LSM

description: This FAIRsharing record describes:  An ontology of CD markers for lymphocyte classification in the cell ontology, and other categories of surface and secreted proteins useful for discriminating between lymphocyte subsets by flow cytometry, ELISPOT, ELISA and other assays typically used for phenotypic identification of individual lymphocytes or lymphocyte populations have been included.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.9091d9
title: FAIRsharing record for: GEneral Multilingual Environmental Thesaurus
title: GEMET

description: This FAIRsharing record describes:  The GEneral Multilingual Environmental Thesaurus (GEMET) was created as a “general” environmental thesaurus, aimed to define a common general language with a core of general terminology for the environment. It is the reference vocabulary of the European Environment Agency (EEA) and its Network (Eionet).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.jw7rq3
title: FAIRsharing record for: Minimum Information for Reporting Next Generation Sequencing Genotyping
title: MIRING

description: This FAIRsharing record describes:  MIRING defines the minimum information needed to describe genotyping results for HLA and KIR genes generated using Next Generation Sequencing (NGS) methods, allowing reinterpretation in light of continuous developments in reference sequence and genomic alignment resources for these genes.  MIRING further defines the elements of a message to be used to exchange genotyping results. Use of MIRING ensures the long-term portability and broad application of NGS genotyping data for histocompatibility, immunogenetic and immunogenomic applications.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.osiqlf
title: FAIRsharing record for: IUPAC Compendium of Chemical Terminology
title: IUPAC Gold Book

description: This FAIRsharing record describes:  The IUPAC Gold Book is a database of ~7000 chemical concepts derived from IUPAC's Recommendations published in Pure and Applied Chemistry.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.efv7gw
title: FAIRsharing record for: HOMology
title: HOM

description: This FAIRsharing record describes:  This ontology represents concepts related to homology, as well as other concepts used to describe similarity and non-homology.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.zbmg97
title: FAIRsharing record for: Essential Study Quality Descriptors for Data from Nutritional Epidemiologic Research
title: null

description: This FAIRsharing record describes:  Pooled analysis of secondary data increases the power of research and enables scientific discovery in nutritional epidemiology. Information on study characteristics that determine data quality is needed to enable correct reuse and interpretation of data. This study aims to define essential quality characteristics for data from observational studies in nutrition. To ensure interoperability of nutrition data systems, ENPADASI is developing an Ontology for Nutritional Studies (ONS). All descriptors of these study data characteristics will be made part of ONS and implemented as such in the research infrastructure. The descriptors for data quality will be mapped to existing or newly developed ontology terms. Integration of study quality characteristics with the ONS will enable the consideration of study quality during the querying of the nutrition research infrastructure and interoperability with other data systems.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.d69ee0
title: FAIRsharing record for: ISO 19136-1:2020 Geographic information -- Geography Markup Language -- Part 1: Fundamentals
title: GML

description: This FAIRsharing record describes:  The Geography Markup Language (GML) is an XML grammar for expressing geographical features. GML serves as a modeling language for geographic systems as well as an open interchange format for geographic transactions on the Internet. Generic geographic data sets are described using GML via points, lines and polygons. GML also supports community-specific extensions, allowing users to refer to objects such as roads, highways, and bridges instead of points, lines and polygons. GML is both a Open Geospatial Consortium (OGC) and an ISO (ISO 19136-1:2020) standard, and therefore abbreviations from both sources are included in the record.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.yvc76f
title: FAIRsharing record for: International GeoSample Number
title: IGSN (GeoSample)

description: This FAIRsharing record describes:  The IGSN is a globally unique persistent identifier for physical specimens. The IGSN registration service will facilitate the discovery, access, and sharing of samples, ensure preservation and access of sample data, aid identification of samples in the literature, and advance the exchange of digital sample data among interoperable data systems.  
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.5rzy8w
title: FAIRsharing record for: Minimum Information About Sample Preparation for a Phosphoproteomics Experiment
title: MIASPPE

description: This FAIRsharing record describes:  Please note: We cannot find an up-to-date website or official reporting guideline document for this resource. As such, we have marked it as Uncertain. Please contact us if you have any information on the current status of this resource.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.76c96a
title: FAIRsharing record for: OpenAIRE Guidelines for Literature Repositories
title: null

description: This FAIRsharing record describes:  OpenAIRE Guidelines for Literature Repository Managers provides orientation for repository managers to define and implement their local data management policies according to the requirements of the OpenAIRE - Open Access Infrastructure for Research in Europe.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.3wbgm0
title: FAIRsharing record for: Mouse PATHology
title: MPATH

description: This FAIRsharing record describes:  Mouse PATHology (MPATH) ontology is a structured controlled vocabulary of mutant and transgenic mouse pathology phenotypes. This resource was developed by the Pathology Consortium of Pathbase (www.pathbase.net).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.nttge3
title: FAIRsharing record for: Suggested Ontology for PHARMacogenomics
title: SOPHARM

description: This FAIRsharing record describes:  SO-Pharm is a formal ontology that represent domain knowledge in pharmacogenomics. To achieve this goal, SO-Pharm articulates ontologies from sub domains of phamacogenomics (i.e. genotype, phenotype, drug, trial representations). SO-Pharm enables to support knowledge about pharmacogenomic hypothesis, case study, and investigations in pharmacogenomics.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.gq1xtx
title: FAIRsharing record for: Information Artifact Ontology
title: IAO

description: This FAIRsharing record describes:  The Information Artifact Ontology (IAO) is an ontology of information entities, originally driven by work by the OBI digital entity and realizable information entity branch.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.sbbbf6
title: FAIRsharing record for: Genome Biology Ontology Language
title: GBOL

description: This FAIRsharing record describes:  To enable interoperability of genome annotations, we have developed the Genome Biology Ontology Language (GBOL) and associated stack (GBOL stack). GBOL is provenance centered and provides a consistent representation of genome derived automated predictions linked to the dataset-wise and element-wise provenance of predicted elements. GBOL is modular in design, extendible and is integrated with existing ontologies. Interoperability of linked data can only be guaranteed through the application of tools that provide the means for a continuous validation of generated linked data. The GBOL stack enforces consistency within and between the OWL and ShEx definitions. Genome wide large scale functional analyses can then easily be achieved using SPARQL queries. Additionally, modules have been developed to serialize the linked data (RDF) and to generate a plain text format files with integrated support for data provenance that that mimic the indentation structure of GenBank and EMBL formats.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.agvc7y
title: FAIRsharing record for: C. elegans phenotype
title: WB-PHENOTYPE

description: This FAIRsharing record describes:  A structured controlled vocabulary of Caenorhabditis elegans phenotypes .
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.sc3be1
title: FAIRsharing record for: Separation Markup Language
title: PSI SpML

description: This FAIRsharing record describes:  The HUPO-PSI Protein Separation work group is a collaboration of researchers from academia, industrial partners and software vendors. The group aims to develop reporting requirements that supplement the MIAPE parent document, describing the minimum information that should be reported about gel-based, and non-gel based separation technologies employed for proteins and peptides in proteomics. The group will also develop data formats for capturing MIAPE-compliant data about these technologies and supporting controlled vocabularies.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.64f3va
title: FAIRsharing record for: Phenotype Fragment Ontology
title: PFO

description: This FAIRsharing record describes:  The Phenotype Fragment Ontology, together with a processing pipeline, enable the automatic decomposition and conceptualization of phenotype descriptions for the human skeletal phenome.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.j01xzz
title: FAIRsharing record for: NeuroMorpho.Org species ontology
title: NMOSP

description: This FAIRsharing record describes:  The species ontology of NeuroMorpho.Org was updated (OntoSearch v1.3) to map the new species and strains added in NeuroMorpho.Org v6.3 release.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.s3swh2
title: FAIRsharing record for: Minimum Information about an fMRI Study
title: MIfMRI

description: This FAIRsharing record describes:  The purpose of the Minimum Information about an fMRI Study guidelines is to elaborate the principles of open and reproducible research for neuroimaging using Magnetic Resonance Imaging (MRI), and then distil these principles to specific research practices. They were created to serve as a benchmark and to raise the standards of practice and reporting in neuroimaging using MRI. These reporting guidelines were developed by the Committee on Best Practices in Data Analysis and Sharing (COBIDAS) of the Organization for Human Brain Mapping.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.zwtww5
title: FAIRsharing record for: The Vaccine Ontology
title: VO

description: This FAIRsharing record describes:  The Vaccine Ontology (VO) was created as part of an international community-based effort to represent vaccine knowledge and to support automated reasoning. VO describes the detailed classification and definitions of vaccine components and vaccine administration processes. To ensure consistent representation of vaccine knowledge and to support automated reasoning, a community-based effort to develop the Vaccine Ontology (VO) has been initiated. This international collaborative VO development effort has been joined by many institutes and disciplines around the world. The Vaccine Ontology is also being used in a variety of applications by many user groups in academia and industry.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.rn9wzc
title: FAIRsharing record for: Gel electrophoresis Markup Language
title: PSI GelML

description: This FAIRsharing record describes:  GelML is a data exchange format for describing the results of gel electrophoresis experiments. GelML is developed as a HUPO-PSI working group.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.je0wca
title: FAIRsharing record for: Drug Database for Inborn Errors of Metabolism Ontology
title: DDIEM Ontology

description: This FAIRsharing record describes:  DDIEM Ontology for the Drug Database for Inborn Errors of Metabolism. The DDIEM database is a database of therapeutic strategies and treatments for inborn errors of metabolism. These strategies are classified by mechanism and outcome using the DDIEM Ontology.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.kqt2h2
title: FAIRsharing record for: RNA Ontology
title: RNAO

description: This FAIRsharing record describes:  RNAO is a controlled vocabulary pertaining to RNA function and based on RNA sequences, secondary and three-dimensional structures. The central aim of the RNA Ontology Consortium (ROC) is to develop an ontology to capture all aspects of RNA - from primary sequence to alignments, secondary and tertiary structure, and from base pairing and base stacking interactions to sophisticated motifs.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.