cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc217h71
title: CCDC 1884032: Experimental Crystal Structure Determination

description: Related Article: Biing-Chiau Tzeng|2018|CSD Communication|||
description: Related Article: Biing-Chiau Tzeng, Jun-Fu Lin|2019|Dalton Trans.|48|4046|doi:10.1039/C8DT04904A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc217h82
title: CCDC 1884033: Experimental Crystal Structure Determination

description: Related Article: Biing-Chiau Tzeng|2018|CSD Communication|||
description: Related Article: Biing-Chiau Tzeng, Jun-Fu Lin|2019|Dalton Trans.|48|4046|doi:10.1039/C8DT04904A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc217ld9
title: CCDC 1884130: Experimental Crystal Structure Determination

description: Related Article: Ulrich Flörke, Aamer Saeed|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc217lfb
title: CCDC 1884131: Experimental Crystal Structure Determination

description: Related Article: Ulrich Flörke, Aamer Saeed|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc217h93
title: CCDC 1884034: Experimental Crystal Structure Determination

description: Related Article: Biing-Chiau Tzeng|2018|CSD Communication|||
description: Related Article: Biing-Chiau Tzeng, Jun-Fu Lin|2019|Dalton Trans.|48|4046|doi:10.1039/C8DT04904A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc217hh9
title: CCDC 1884040: Experimental Crystal Structure Determination

description: Related Article: Tadeusz  Lis|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc217j50
title: CCDC 1884061: Experimental Crystal Structure Determination

description: Related Article: qian wang|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc9w62f
title: CCDC 294254: Experimental Crystal Structure Determination

description: Related Article: Tadeusz  Lis|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.ccymqx5
title: CCDC 882908: Experimental Crystal Structure Determination

description: Related Article: Ulrich Flörke, Aamer Saeed|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.ccz3cn2
title: CCDC 896974: Experimental Crystal Structure Determination

description: Related Article: Ulrich Flörke, Aamer Saeed|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.ccz3cp3
title: CCDC 896975: Experimental Crystal Structure Determination

description: Related Article: Ulrich Flörke, Aamer Saeed|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.ccz3cq4
title: CCDC 896976: Experimental Crystal Structure Determination

description: Related Article: Ulrich Flörke, Aamer Saeed|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.2246363
title: Code and Data to recreate figures from: Activation of immune receptor Rx1 triggers distinct immune-responses culminating in cell death after four hours.

description: Code and Data to recreate figures from: Activation of immune receptor Rx1 triggers distinct immune-responses culminating in cell death after four hours.

https://doi.org/10.1111/mpp.12776

 

These files are also on Github:

https://github.com/MolPlantPathology/PMID-30537296-
DOI: 10.5281/zenodo.2246364
title: Code and Data to recreate figures from: Activation of immune receptor Rx1 triggers distinct immune-responses culminating in cell death after four hours.

description: Code and Data to recreate figures from: Activation of immune receptor Rx1 triggers distinct immune-responses culminating in cell death after four hours.

https://doi.org/10.1111/mpp.12776

 

These files are also on Github:

https://github.com/MolPlantPathology/PMID-30537296-
DOI: 10.5517/ccdc.csd.cc10n0d2
title: CCDC 942753: Experimental Crystal Structure Determination

description: Related Article: Ulrich Flörke, Aamer Saeed|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.2245188
title: X-ray spectrum of an arrangement of 8 clumps

description: In Buchner et al. (in prep) computations of a X-ray obscurers of AGN are presented. Here the same simulation software, XARS, is applied to a crate of 3x3x3 clumps.

See https://github.com/JohannesBuchner/xars for more information.
DOI: 10.5281/zenodo.2245189
title: X-ray spectrum of an arrangement of 8 clumps

description: In Buchner et al. (in prep) computations of a X-ray obscurers of AGN are presented. Here the same simulation software, XARS, is applied to a crate of 3x3x3 clumps.

See https://github.com/JohannesBuchner/xars for more information.
DOI: 10.5517/ccdc.csd.cc217vjp
title: CCDC 1884382: Experimental Crystal Structure Determination

description: Related Article: Arumugam chemarumugam|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15482/usda.adc/1503305
title: Divergence in host specificity and genetics among populations of Aphelinus certus

description: These are data on variation in host specificity and genetics among 16 populations of an aphid parasitoid, Aphelinus certus, 15 from Asia and one from North America. Host range was the same for all the parasitoid populations, but levels of parasitism varied among aphid species, suggesting adaptation to locally abundant aphids. Differences in host specificity did not correlate with geographical distances among parasitoid populations, suggesting that local adaption is mosaic rather than clinal, with a spatial scale of less than 50 kilometers. Analysis of reduced representation libraries for each population showed genetic differentiation among them. Differences in host specificity correlated with genetic distances among the parasitoid populations.
DOI: 10.25911/5c11ced59e324
title: Victorian Alpine Plot Network (Alpine Summit Plots): Lowland-to-highland Roadside Transects 4WD Tracks Data, South-East Highlands, Australia, 2014
title: Victorian Alpine Plot Network: Lowland-to-highland Roadside Transects — 4WD Summit Plots, 2014

description: This Victorian Alpine Plot Network Road Transects 4WD Track Data Package comprises transect-based vegetation data for 5 Lowland-to-highland 4WD Roadside Transects in the South-East Highlands, Australia. These data have been used against background quadrat data to test a hypothesis about roads as vectors for dispersal of invasive species. Plots are located at altitudinally stratified intervals along five altitudinally-stratified transects. The transects follow major roads and management tracks in the Victorian Alps. Each track is divided into 20 altitudinal sectors in which a single plot is situated. Within each plot, all species are identified and are assigned abundance and cover scores. The Alpine Summit plots study, which commenced in 2001, forms part of the collection of data packages by the Victorian Alpine Plot Network. A synopsis of related data packages which have been collected as part of the Victorian Alpine Plot Network’s full program is provided at TBA.
description: Abstract: This Victorian Alpine Plot Network Road Transects 4WD Track Data Package comprises transect-based vegetation data for 5 Lowland-to-highland 4WD Roadside Transects in the South-East Highlands, Australia. These data have been used against background quadrat data to test a hypothesis about roads as vectors for dispersal of invasive species. Plots are located at altitudinally stratified intervals along five altitudinally-stratified transects. The transects follow major roads and management tracks in the Victorian Alps. Each track is divided into 20 altitudinal sectors in which a single plot is situated. Within each plot, all species are identified and are assigned abundance and cover scores. The Alpine Summit plots study, which commenced in 2001, forms part of the collection of data packages by the Victorian Alpine Plot Network. A synopsis of related data packages which have been collected as part of the Victorian Alpine Plot Network’s full program is provided at TBA.


Sampling method: The data collection protocol follows the guidelines of the Mountain Invasion Research Network (MIREN; http://www.mountaininvasions.org/). The aim is to determine which exotic (and native) species are where on mountain roadsides and are using these data against background quadrat data collected over past years and decades to test hypotheses about roads as vectors for dispersal of invasive species.

Study extent: These data aim to document the distribution of exotic (and native) species from foothills to mountain summits along transport corridors.

Project funding: Parks Victoria, Mt Hotham Alpine Resort. Between 2012 and 2018 this project was part of the Long Term Ecological Research Network (LTERN). LTERN is a Facility within the Terrestrial Ecosystem Research Network (TERN) supported by the Australian Government through the National Collaborative Research Infrastructure Strategy (NCRIS)
DOI: 10.5281/zenodo.2224650
title: X-ray spectrum of Torus Wedges

description: In Buchner et al. (in prep) computations of a X-ray obscurers of AGN are presented. The files show the wedge torus.

See https://github.com/JohannesBuchner/xars for more information.
DOI: 10.5281/zenodo.2224651
title: X-ray spectrum of Torus Wedges

description: In Buchner et al. (in prep) computations of a X-ray obscurers of AGN are presented. The files show the wedge torus.

See https://github.com/JohannesBuchner/xars for more information.
DOI: 10.5281/zenodo.2248156
title: Replication Kit: "Are Unit and Integration Test Definitions Still Valid for Modern Java Projects? An Empirical Study on Open-Source Projects"

description: <strong>Replication Kit for the Paper "Are Unit and Integration Test Definitions Still Valid for Modern Java Projects? An Empirical Study on Open-Source Projects"</strong><br>
This additional material shall provide other researchers with the ability to replicate our results. Furthermore, we want to facilitate further insights that might be generated based on our data sets.

<strong>Structure</strong><br>
The structure of the replication kit is as follows:


	<strong>additional_visualizations</strong>: contains additional visualizations (Venn-Diagrams) for each projects for each of the data sets that we used
	<strong>data_analysis</strong>: contains two python scripts that we used to analyze our raw data (one for each research question)
	<strong>data_collection_tools</strong>: contains all source code used for the data collection, including the used versions of the COMFORT framework, the BugFixClassifier, and the used tools of the SmartSHARK environment;
	<strong>mongodb_no_authors</strong>: Archived dump of our MongoDB that we created by executing our data collection tools. The "comfort" database can be restored via the mongorestore command.


<br>
<strong>Additional Visualizations</strong><br>
We provide two additional visualizations for each project:<br>
1) &lt;project_name&gt;\_disj\_ieee\_venn (visualizations for the DISJ data set)<br>
2) &lt;project_name&gt;\_all\_ieee\_venn (visualizations for the ALL data set)

For each of these data sets there exist one visualization for each project that shows four Venn-Diagrams for each of the different defect types. These Venn-Diagrams show the number of defects that were detected by either unit, or integration tests (or both).

Furthermore, we added boxplots for each of the data sets (i.e., ALL and DISJ) showing the scores of unit and integration tests for each defect type.

<br>
<strong>Analysis scripts</strong><br>
Requirements:<br>
- python3.5<br>
- tabulate<br>
- scipy<br>
- seaborn<br>
- mongoengine<br>
- pycoshark<br>
- pandas<br>
- matplotlib

Both python files contain all code for the statistical analysis we performed.

<strong>Data Collection Tools</strong><br>
We provide all data collection tools that we have implemented and used throughout our paper. Overall it contains six different projects and one python script:


	<strong>BugFixClassifier</strong>: Used to classify our defects.
	<strong>comfort-core</strong>: Core of the comfort framework. Used to classify our tests into unit and integration tests and calculate different metrics for  these tests.
	<strong>comfort-jacoco-listner</strong>: Used to intercept the coverage collection process as we were executing the tests of our case study projects.
	<strong>issueSHARK</strong>: Used to collect data from the ITSs of the projects.
	<strong>pycoSHARK</strong>: Library that contains models for the used ORM mapper that is used insight the SmartSHARK environment.
	<strong>vcsSHARK</strong>: Used to collect data from the VCSs of the projects.
DOI: 10.5281/zenodo.2247566
title: The Leprechauns of Quality Requirements: Beliefs and Dispersion in Academia and Practice - Additional Material

description: This dataset contains additional material for the research paper "The Leprechauns of Quality Requirements: Beliefs and Dispersion in Academia and Practice".

More specifically, it contains four files:


	Questionaire_Print version.pdf: The survey instrument that we used for the study.
	Leprechauns.gephi: A Gephi file containing the graphs that we used in the paper.
	data.csv: A csv file containing the answers of all survey participants.
	processing_script.R: An R script that we used to analyse and visualize the data.
DOI: 10.7488/3a935dd6-b1e3-4150-a32e-d3935e3d6c27
title: Liz Glass TB_Project

description: Data and ancillary files from: Genome wide association studies on bovine tuberculosis BBSRC funded projects: CEDFAS initiative grants BB/E018386/1 and BB/E018335/1 and 2; Animal Health Research Club grant BB/L004054/1; Institute Strategic Programme Grants (ISP3 Innate Immunity & Endemic Disease) [BB/J004227/1], (ISP1 Analysis and Prediction in Complex Animal Systems) [BB/J004235/1]
description: Data and ancillary files from several BBSRC funded projects.
DOI: 10.13140/rg.2.2.21737.54881
title: NIS_Rosa spinosissima
DOI: 10.13140/rg.2.2.28448.43526
title: NIS_Rosa spinosissima
DOI: 10.13140/rg.2.2.35159.32161
title: NIS_Rosa spinosissima
DOI: 10.14457/sut.res.2016.47
title: ศักยภาพของประเภทของแป้งที่ทนต่อการย่อยด้วยเอนไซม์ในการกระตุ้นการเจริญของจุลินทรีย์ที่เป็นสารเสริมชีวนะ
DOI: 10.14457/sut.res.2016.49
title: คุณสมบัติของคัพภะ รำ และแป้งลูกเดือยเพื่ออาหารสุขภาพ
DOI: 10.14457/sut.res.2017.27
title: การควบคุมแบบอัตโนมัติของระบบปั๊มน้ำสำหรับไร่มันสำปะหลัง ที่ใช้แหล่งพลังงานโซลาร์เซลล์
DOI: 10.14457/sut.res.2016.51
title: ปฏิกิริยาร่วมเฉือนระหว่างมวลรวมคอนกรีตรีไซเคิลและจีโอกริด
DOI: 10.15151/esrf-es-116040417
title: Finnish National Protein Crystallography Consortium (FinnProCC)
DOI: 10.17632/cttkm2b9rp.1
title: Data for: Revisiting the equable climate problem during the Late Cretaceous greenhouse using paleosol carbonate clumped isotope temperatures from the Campanian Western Interior Basin, USA

description: These files contain data and supplementary data including stable and clumped isotope replicate data for paleosol carbonates collected from the Late Cretaceous Kaiparowits (Utah, USA) and Two Medicine (Montana, USA) formations. Also includes reconstructed warmest month mean temperatures, mean annual range in temperature, and estimated coldest month mean temperatures for the two study areas.
DOI: 10.15151/esrf-es-116065101
title: Structural Biology at EMBL Grenoble and IBS-CIBB
DOI: 10.17632/gxdp48sw73.1
title: Data for: Sea level-controlled sediment transport to the eastern Arabian Sea over the past 600 kyr: Clay minerals and Sr-Nd isotopic evidence from IODP Site U1457

description: Supporting Table S1 Clay mineral data of IODP Site U1457 since 600 kyr
DOI: 10.5281/zenodo.1405382
title: Herschel‐Atlas/Gama: A Census Of Dust In Optically Selected Galaxies From Stacking At Submillimetre Wavelengths

description: Stacked sub-millimetre fluxes, luminosities, and derived dust masses and temperatures for GAMA galaxies...


	as a function of stellar mass, optical colour and redshift:  StackResults_g-r_Mstar
	as a function of r-band absolute magnitude, optical colour and redshift:  StackResults_g-r_Mr


See readme files for full details.
description: If using this data, please cite the paper linked under "Related Identifiers"
description: {"references": ["Bourne, Nathan et al. (2012) Monthly Notices of the Royal Astronomical Society, 421, 3027"]}
DOI: 10.5281/zenodo.1405383
title: Herschel‐Atlas/Gama: A Census Of Dust In Optically Selected Galaxies From Stacking At Submillimetre Wavelengths

description: Stacked sub-millimetre fluxes, luminosities, and derived dust masses and temperatures for GAMA galaxies...


	as a function of stellar mass, optical colour and redshift:  StackResults_g-r_Mstar
	as a function of r-band absolute magnitude, optical colour and redshift:  StackResults_g-r_Mr


See readme files for full details.
description: If using this data, please cite the paper linked under "Related Identifiers"
description: {"references": ["Bourne, Nathan et al. (2012) Monthly Notices of the Royal Astronomical Society, 421, 3027"]}
DOI: 10.5281/zenodo.2248035
title: Artcode Datasets: True Artcode Dataset (TAD) and Extended Artcode Dataset (EAD)

description: Artcode Datsets: True Artcode dataset and its extended Artcode dataset, using for Artcode classification.
DOI: 10.5281/zenodo.2248036
title: Artcode Datasets: True Artcode Dataset (TAD) and Extended Artcode Dataset (EAD)

description: Artcode Datsets: True Artcode dataset and its extended Artcode dataset, using for Artcode classification.
DOI: 10.5281/zenodo.1405547
title: Evolution Of Cosmic Star Formation In The Scuba-2 Cosmology Legacy Survey

description: This dataset consists of tabulated data from the figures included in the referenced publication. The following datasets are included:

Stacked SFR obscuration (IRX=IR/UV) of UVJ-selected star-forming galaxies:


	Weighted mean IRX as a function of Muv & stellar mass (Figure 12):  MUV_irx1.dat
	Weighted mean IRX as a function of beta, over all masses and redshifts:  beta_irx.dat
	Weighted mean IRX as a function of beta, binned by stellar mass (Figure 13):  beta_irx_mstar.dat
	Weighted mean IRX as a function of beta, binned by redshift (Figure 14):   beta_irx_z.dat


Cosmic SFR density as a function of redshift for massive galaxies log(Ms/Msol)&gt;10 (Figure 15):


	All mass-selected galaxies:  sfrd_massive.dat
	UV-luminous galaxies Muv&lt;M*; log(Ms/Msol)&gt;10:  sfrd_hiLUV.dat
	IR-luminous galaxies detected at 450µm:  sfrd_IRdet.dat


 

Cosmic SFR density as a function of redshift corrected to all stellar masses (Figure 16):


	All mass-selected galaxies:  sfrd_uvlfcorr.dat
	UV-luminous galaxies Muv&lt;M*; log(Ms/Msol)&gt;10:  sfrd_hiLUV_uvlfcorr.dat


Full details of the binning and stacking methodology are explained in the paper.
description: If using this data, please cite the paper linked under "Related Identifiers"
description: {"references": ["Bourne, Nathan et al. (2017) Monthly Notices of the Royal Astronomical Society, 467, 1360"]}