cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9798248.v1
title: jc.2019-01375 Supplemental Tables

description: <b>Supplemental Table 1. </b>Predicted hormone level 95% confidence intervals for age (1-year increments) based on manuscript Figure 1, panels a-d. Due to small number of samples in the tail ends of the dataset, satisfactory reference intervals for ages 6 and 15 years could not be determined. <b></b><br><b>Supplemental Table 2. </b>Predicted hormone level 95% confidence intervals for orchidometer testicular volume (1-ml increments) based on manuscript Figure 2, panels a-d. The model was unable to determine accurate reference intervals for the tail ends of the dataset due to small sample sizes. Abbreviations: orchidometer testicular volume, TV<sub>OM</sub>; ultrasound testicular volume, TV<sub>US</sub>.<br>
DOI: 10.6084/m9.figshare.9798155
title: High order profile expansion dataset

description: High order profile expansion dataset consisting of 8,362 items and 478,458 users, who have done 48,715,350 ratings between 1 and 5 both inclusive.
DOI: 10.6084/m9.figshare.9798155.v1
title: High order profile expansion dataset

description: High order profile expansion dataset consisting of 8,362 items and 478,458 users, who have done 48,715,350 ratings between 1 and 5 both inclusive.
DOI: 10.6084/m9.figshare.9797801
title: raw data for pheasants niche comparison

description: The raw data about microhabitat features, activity patterns, foraging behavior parameters of three montane pheasant species (blood pheasant, buff-throated partridge, and white eared-pheasant) sympatric in the Qinghai-Tibet Plateau during breeding seasons, collected combining different investigative methods in the field during 2014 to 2016.
DOI: 10.6084/m9.figshare.9797801.v1
title: raw data for pheasants niche comparison

description: The raw data about microhabitat features, activity patterns, foraging behavior parameters of three montane pheasant species (blood pheasant, buff-throated partridge, and white eared-pheasant) sympatric in the Qinghai-Tibet Plateau during breeding seasons, collected combining different investigative methods in the field during 2014 to 2016.
DOI: 10.6084/m9.figshare.9797792
title: MOESM8 of Transcriptome analysis of the effect of C-C chemokine receptor 5 deficiency on cell response to Toxoplasma gondii in brain cells

description: Additional file 8: Table S4. Genes up/downregulated just by CCR5-deficiency regardless of T. gondii infection. DEGs were identified by comparing between the uninfected wild-type and uninfected CCR5-deficient mice, with a threshold of 2-fold change andâ
DOI: 10.6084/m9.figshare.9797792.v1
title: MOESM8 of Transcriptome analysis of the effect of C-C chemokine receptor 5 deficiency on cell response to Toxoplasma gondii in brain cells

description: Additional file 8: Table S4. Genes up/downregulated just by CCR5-deficiency regardless of T. gondii infection. DEGs were identified by comparing between the uninfected wild-type and uninfected CCR5-deficient mice, with a threshold of 2-fold change andâ
DOI: 10.6084/m9.figshare.9797774
title: MOESM2 of Transcriptome analysis of the effect of C-C chemokine receptor 5 deficiency on cell response to Toxoplasma gondii in brain cells

description: Additional file 2: Table S2. Detailed data for top 10 GO terms overrepresented in the DEGs in which upregulation during T. gondii infection was impaired by CCR5-deficiency in astrocytes and microglia. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.9797777
title: MOESM3 of Transcriptome analysis of the effect of C-C chemokine receptor 5 deficiency on cell response to Toxoplasma gondii in brain cells

description: Additional file 3: Table S3. Top10 KEGG pathways enriched in the DEGs in which upregulation during T. gondii infection was impaired by CCR5-deficiency in astrocytes and microglia. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9797777.v1
title: MOESM3 of Transcriptome analysis of the effect of C-C chemokine receptor 5 deficiency on cell response to Toxoplasma gondii in brain cells

description: Additional file 3: Table S3. Top10 KEGG pathways enriched in the DEGs in which upregulation during T. gondii infection was impaired by CCR5-deficiency in astrocytes and microglia. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9797774.v1
title: MOESM2 of Transcriptome analysis of the effect of C-C chemokine receptor 5 deficiency on cell response to Toxoplasma gondii in brain cells

description: Additional file 2: Table S2. Detailed data for top 10 GO terms overrepresented in the DEGs in which upregulation during T. gondii infection was impaired by CCR5-deficiency in astrocytes and microglia. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.9797765
title: MOESM1 of Transcriptome analysis of the effect of C-C chemokine receptor 5 deficiency on cell response to Toxoplasma gondii in brain cells

description: Additional file 1: Table S1. Detailed expression data for DEGs in which upregulation during T. gondii infection was impaired by CCR5-deficiency. (XLSX 67 kb)
DOI: 10.6084/m9.figshare.9797765.v1
title: MOESM1 of Transcriptome analysis of the effect of C-C chemokine receptor 5 deficiency on cell response to Toxoplasma gondii in brain cells

description: Additional file 1: Table S1. Detailed expression data for DEGs in which upregulation during T. gondii infection was impaired by CCR5-deficiency. (XLSX 67 kb)
DOI: 10.6084/m9.figshare.9797750
title: MOESM10 of Transcriptome analysis of the effect of C-C chemokine receptor 5 deficiency on cell response to Toxoplasma gondii in brain cells

description: Additional file 10: Table S5. Primer sequences used in RT-qPCR. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9797750.v1
title: MOESM10 of Transcriptome analysis of the effect of C-C chemokine receptor 5 deficiency on cell response to Toxoplasma gondii in brain cells

description: Additional file 10: Table S5. Primer sequences used in RT-qPCR. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9797663
title: Additional file 4: of Differential contractile response of critically ill patients to neuromuscular electrical stimulation

description: Standardised NMES Reporting Sheet. Standardised NMES reporting sheet for NMES protocol and stimulation specifications. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.9797663.v1
title: Additional file 4: of Differential contractile response of critically ill patients to neuromuscular electrical stimulation

description: Standardised NMES Reporting Sheet. Standardised NMES reporting sheet for NMES protocol and stimulation specifications. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.9797642
title: Additional file 1: of Differential contractile response of critically ill patients to neuromuscular electrical stimulation

description: Table S2. a Neuromuscular electrical stimulation reporting: protocol specifications. Specifications of the developed NMES protocol. b Neuromuscular electrical stimulation reporting: stimulation and contraction specifications. Specification of the applied NMES. Electrical current shows the median electrical current applied to patients with a positive contractile response per muscle group and day. Contractile response shows the percentage of patients with a positive contractile response per muscle group and day. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.9797642.v1
title: Additional file 1: of Differential contractile response of critically ill patients to neuromuscular electrical stimulation

description: Table S2. a Neuromuscular electrical stimulation reporting: protocol specifications. Specifications of the developed NMES protocol. b Neuromuscular electrical stimulation reporting: stimulation and contraction specifications. Specification of the applied NMES. Electrical current shows the median electrical current applied to patients with a positive contractile response per muscle group and day. Contractile response shows the percentage of patients with a positive contractile response per muscle group and day. (XLSX 19 kb)
DOI: 10.6084/m9.figshare.9797555
title: MOESM4 of The role of PKAc1 in gene regulation and trichodimerol production in Trichoderma reesei

description: Additional file 4. Comparative analysis of genes with altered transcript levels in Δpkac1 and genes regulated by photoreceptors, CRE1 and by light upon growth on cellulose.
DOI: 10.6084/m9.figshare.9797549
title: MOESM3 of The role of PKAc1 in gene regulation and trichodimerol production in Trichoderma reesei

description: Additional file 3. Genes with altered transcript levels in Δpkac1 and regulation in an induction specific manner.
DOI: 10.6084/m9.figshare.9797555.v1
title: MOESM4 of The role of PKAc1 in gene regulation and trichodimerol production in Trichoderma reesei

description: Additional file 4. Comparative analysis of genes with altered transcript levels in Δpkac1 and genes regulated by photoreceptors, CRE1 and by light upon growth on cellulose.
DOI: 10.6084/m9.figshare.9797540
title: MOESM2 of The role of PKAc1 in gene regulation and trichodimerol production in Trichoderma reesei

description: Additional file 2. Functional category analysis of genes with altered transcript levels in Δpkac1 and the subset of genes with overlapping regulation to photoreceptor targets.
DOI: 10.6084/m9.figshare.9797531
title: MOESM1 of The role of PKAc1 in gene regulation and trichodimerol production in Trichoderma reesei

description: Additional file 1. Target genes of PKAc1 during growth on cellulose in light and darkness.
DOI: 10.6084/m9.figshare.9797549.v1
title: MOESM3 of The role of PKAc1 in gene regulation and trichodimerol production in Trichoderma reesei

description: Additional file 3. Genes with altered transcript levels in Δpkac1 and regulation in an induction specific manner.
DOI: 10.6084/m9.figshare.9797540.v1
title: MOESM2 of The role of PKAc1 in gene regulation and trichodimerol production in Trichoderma reesei

description: Additional file 2. Functional category analysis of genes with altered transcript levels in Δpkac1 and the subset of genes with overlapping regulation to photoreceptor targets.
DOI: 10.6084/m9.figshare.9797525
title: MOESM5 of Relevance of body weight effects for the population development of common voles and its significance in regulatory risk assessment of pesticides in the European Union

description: Additional file 5. Trapping raw data.
DOI: 10.6084/m9.figshare.9797531.v1
title: MOESM1 of The role of PKAc1 in gene regulation and trichodimerol production in Trichoderma reesei

description: Additional file 1. Target genes of PKAc1 during growth on cellulose in light and darkness.
DOI: 10.6084/m9.figshare.9797522
title: MOESM4 of Relevance of body weight effects for the population development of common voles and its significance in regulatory risk assessment of pesticides in the European Union

description: Additional file 4. Allocated mothers.
DOI: 10.6084/m9.figshare.9797525.v1
title: MOESM5 of Relevance of body weight effects for the population development of common voles and its significance in regulatory risk assessment of pesticides in the European Union

description: Additional file 5. Trapping raw data.
DOI: 10.6084/m9.figshare.9797516
title: MOESM3 of Relevance of body weight effects for the population development of common voles and its significance in regulatory risk assessment of pesticides in the European Union

description: Additional file 3. Allocated fathers.
DOI: 10.6084/m9.figshare.9797522.v1
title: MOESM4 of Relevance of body weight effects for the population development of common voles and its significance in regulatory risk assessment of pesticides in the European Union

description: Additional file 4. Allocated mothers.
DOI: 10.6084/m9.figshare.9797516.v1
title: MOESM3 of Relevance of body weight effects for the population development of common voles and its significance in regulatory risk assessment of pesticides in the European Union

description: Additional file 3. Allocated fathers.
DOI: 10.6084/m9.figshare.9797507
title: MOESM2 of Relevance of body weight effects for the population development of common voles and its significance in regulatory risk assessment of pesticides in the European Union

description: Additional file 2. Genotyped animals.
DOI: 10.6084/m9.figshare.9797507.v1
title: MOESM2 of Relevance of body weight effects for the population development of common voles and its significance in regulatory risk assessment of pesticides in the European Union

description: Additional file 2. Genotyped animals.
DOI: 10.6084/m9.figshare.9797492
title: MOESM1 of Introducing low-quality feedstocks in bioethanol production: efficient conversion of the lignocellulose fraction of animal bedding through steam pretreatment

description: Additional file 1. Composition of the pretreated materials at each of the conditions tested for the steam treatment.
DOI: 10.6084/m9.figshare.9797492.v1
title: MOESM1 of Introducing low-quality feedstocks in bioethanol production: efficient conversion of the lignocellulose fraction of animal bedding through steam pretreatment

description: Additional file 1. Composition of the pretreated materials at each of the conditions tested for the steam treatment.
DOI: 10.6084/m9.figshare.9796421
title: Phosphorus fractions in soil cultivated with vineyards after 62 years of poultry litter addition

description: Abstract: The objective of this work was to evaluate changes in phosphorus fractions in a Humic Cambisol cultivated with vineyards, after 62 years of additional fertilization with poultry litter. Soil samples were collected from two vineyards (V1 and V2) and a forested area adjacent to them. A total of 1,365 and 910 kg ha-1 P were applied to V1 and V2, respectively, throughout the past 62 years. Samples were collected at 0-10, 10-20, 20-30, and 30-40-cm soil depths for the analysis of soil physicochemical properties. The addition of poultry litter to the soil of the vineyards increased the contents of inorganic P (Pi) in all fractions, except in the residual fraction (residual-P), mainly at the 0-10-cm soil depth, in comparison with the forested area. The addition of poultry litter as fertilizer does not affect the organic P (Po) stock in the Humic Cambisol, it only increases the Pi contents of the soil.
DOI: 10.6084/m9.figshare.9796421.v1
title: Phosphorus fractions in soil cultivated with vineyards after 62 years of poultry litter addition

description: Abstract: The objective of this work was to evaluate changes in phosphorus fractions in a Humic Cambisol cultivated with vineyards, after 62 years of additional fertilization with poultry litter. Soil samples were collected from two vineyards (V1 and V2) and a forested area adjacent to them. A total of 1,365 and 910 kg ha-1 P were applied to V1 and V2, respectively, throughout the past 62 years. Samples were collected at 0-10, 10-20, 20-30, and 30-40-cm soil depths for the analysis of soil physicochemical properties. The addition of poultry litter to the soil of the vineyards increased the contents of inorganic P (Pi) in all fractions, except in the residual fraction (residual-P), mainly at the 0-10-cm soil depth, in comparison with the forested area. The addition of poultry litter as fertilizer does not affect the organic P (Po) stock in the Humic Cambisol, it only increases the Pi contents of the soil.
DOI: 10.6084/m9.figshare.9796415
title: "Overtime Hours Effect" on Emergency Surgery of Acute Type A Aortic Dissection

description: Abstract Objective: Treatment of acute diseases of the aorta is still associated with high mortality and morbidity. It is believed that interventions for these diseases on overtime hours (night shifts or weekend shifts) may increase mortality. In this study, we investigated the effect of performing acute type A aortic dissection surgery on overtime hours in terms of postoperative outcomes. Methods: 206 patients who underwent emergency surgery for acute type A aortic dissection were retrospectively evaluated. Two groups were constituted: patients operated on daytime working hours (n=61), and patients operated on overtime hours (n=145), respectively. Results: Chronic obstructive pulmonary disease and repeat surgery were higher in group 1. There was no statistically significant difference between the two groups in terms of operative and postoperative results. Mortality rates and postoperative neurological complications in group 1 were 9.8% and 13.1%, respectively. In group 2, these rates were 13.8% and 12.4%, respectively (P=0.485 - P=0.890). Multivariate analysis identified that cross-clamp time, amount of postoperative drainage, preoperative loss of consciousness and postoperative neurological complications are the independent predictors of mortality. Conclusions: As the surgical experience of the clinics improves, treatment of acute type A aortic dissections can be successfully performed both overtime and daytime working hours.
DOI: 10.6084/m9.figshare.9796406
title: Operational and energy performance of the tractor-scarifier assembly: Tires, ballasting and soil cover

description: ABSTRACT The heights of tire claws, tractor ballasting and soil cover can influence the operational and energy performance of the tractor-scarifier assembly. The objective of this study was to analyze the operational and energy performance of the tractor-scarifier assembly as a function of the heights of the tire claws, ballasting and rolling surface. The experiment was conducted at the experimental area of the Fazenda Experimental do Vale do Curu of the Universidade Federal do Ceará in Pentecoste municipality, CE, Brazil. The experiment was carried out in a randomized block in a 2 × 2 × 2 factorial arrangement with four repetitions. The treatments comprised two tire claw heights (T1-28% and T2-100%), two ballasts (B1-100% of solid and 75% liquid weights and B2 - 0% of solid and liquid weights), and two soil surfaces (S1 - soil with 4200 kg of straw ha-1 and S2 - mobilized soil). Worn tires provided a lower bar force (12.88 kN) and power requirement (20.06 kW) and a greater effective and operative field capacity of the tractor-scarifier assembly. The lowest slippage of the front wheels of the tractor was recorded for the worn tires (4.81%).For the rear wheels, slippages were found on the new tires (10.96%), and a higher speed of displacement was found for worn tires (5.54 km h-1). Lower specific fuel consumption was found for the mobilized soil (534.68 g kWh-1); furthermore, the hourly consumption of fuel and the consumption per area were not significantly affected by the treatments analyzed.
DOI: 10.6084/m9.figshare.9796412
title: Left Ventricular Dissecting Hematoma Caused by Tissue Stabilizer

description: Abstract Coronary artery bypass grafting is a commonly performed procedure for coronary revascularization. We describe the successful management of left ventricular dissecting hematoma, caused by the tissue stabilizer, while performing off-pump coronary artery bypass graft procedure.
DOI: 10.6084/m9.figshare.9796415.v1
title: "Overtime Hours Effect" on Emergency Surgery of Acute Type A Aortic Dissection

description: Abstract Objective: Treatment of acute diseases of the aorta is still associated with high mortality and morbidity. It is believed that interventions for these diseases on overtime hours (night shifts or weekend shifts) may increase mortality. In this study, we investigated the effect of performing acute type A aortic dissection surgery on overtime hours in terms of postoperative outcomes. Methods: 206 patients who underwent emergency surgery for acute type A aortic dissection were retrospectively evaluated. Two groups were constituted: patients operated on daytime working hours (n=61), and patients operated on overtime hours (n=145), respectively. Results: Chronic obstructive pulmonary disease and repeat surgery were higher in group 1. There was no statistically significant difference between the two groups in terms of operative and postoperative results. Mortality rates and postoperative neurological complications in group 1 were 9.8% and 13.1%, respectively. In group 2, these rates were 13.8% and 12.4%, respectively (P=0.485 - P=0.890). Multivariate analysis identified that cross-clamp time, amount of postoperative drainage, preoperative loss of consciousness and postoperative neurological complications are the independent predictors of mortality. Conclusions: As the surgical experience of the clinics improves, treatment of acute type A aortic dissections can be successfully performed both overtime and daytime working hours.
DOI: 10.6084/m9.figshare.9796409
title: Habitat, limnological signatures and spatial modeling: a zoning proposal for the Curuá-Una hydroelectric reservoir, Pará, Brazil

description: Abstract Aim The objective of this work is to characterize, spatially model and to perform the zoning of the aquatic environment in the Curuá-Una HPP reservoir, in the state of Pará, in the Brazilian Amazon. Methods The data were collected from 77 sampling points distributed over 20 transects in the Curuá-Una reservoir, in November 2016. The data were obtained through descriptive templates of the landscape, and assessment of limnological, bathymetry and georeferencing variables. To describe and model spatial patterns for the limnological Proxies, geostatistical analysis was used with semivariogram fitting, and interpolation using Ordinary Kriging to generate the maps. To determine the degree of association of the landscape Proxies, Correspondence Analysis (CA) was chosen, and to relate the landscape Proxies with the limnological Proxies, Canonical Correspondence Analysis (CCA) was carried out. Results The results of the analysis of the limnological Proxies showed that the variables presented normal distribution according to the Shapiro-Wilk test (5%) except for transparency and temperature. Most of the variables obtained well-defined, level and good geostatistical analysis. There was a prevalence of gaussian and spherical adjustment models. Different zones in the distribution of the limnological variables in the longitudinal axis of the reservoir were observed. The CA showed a short local gradient in the variables, which effectively characterizes the interface of landscape and human. In Figure 5, the first two axes of the CCA showed 61.17% of the data variability. The limnological signatures showed 42.3% of variability, with high correlation between the landscape Proxies and the environmental Proxies in both axes. Conclusions This type of approach should be useful in managing Brazilian river basins, especially in the Amazon, a focus for the construction of numerous hydroelectric dams, as it can indicate the limnological and environmental state and provide a clearer view of these environments.
DOI: 10.6084/m9.figshare.9796406.v1
title: Operational and energy performance of the tractor-scarifier assembly: Tires, ballasting and soil cover

description: ABSTRACT The heights of tire claws, tractor ballasting and soil cover can influence the operational and energy performance of the tractor-scarifier assembly. The objective of this study was to analyze the operational and energy performance of the tractor-scarifier assembly as a function of the heights of the tire claws, ballasting and rolling surface. The experiment was conducted at the experimental area of the Fazenda Experimental do Vale do Curu of the Universidade Federal do Ceará in Pentecoste municipality, CE, Brazil. The experiment was carried out in a randomized block in a 2 × 2 × 2 factorial arrangement with four repetitions. The treatments comprised two tire claw heights (T1-28% and T2-100%), two ballasts (B1-100% of solid and 75% liquid weights and B2 - 0% of solid and liquid weights), and two soil surfaces (S1 - soil with 4200 kg of straw ha-1 and S2 - mobilized soil). Worn tires provided a lower bar force (12.88 kN) and power requirement (20.06 kW) and a greater effective and operative field capacity of the tractor-scarifier assembly. The lowest slippage of the front wheels of the tractor was recorded for the worn tires (4.81%).For the rear wheels, slippages were found on the new tires (10.96%), and a higher speed of displacement was found for worn tires (5.54 km h-1). Lower specific fuel consumption was found for the mobilized soil (534.68 g kWh-1); furthermore, the hourly consumption of fuel and the consumption per area were not significantly affected by the treatments analyzed.