cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26720664
title: Additional file 9 of 13C-Stable isotope resolved metabolomics uncovers dynamic biochemical landscape of gut microbiome-host organ communications in mice

description: Supplementary Material 9.
DOI: 10.6084/m9.figshare.26720664.v1
title: Additional file 9 of 13C-Stable isotope resolved metabolomics uncovers dynamic biochemical landscape of gut microbiome-host organ communications in mice

description: Supplementary Material 9.
DOI: 10.6084/m9.figshare.26720667
title: Additional file 10 of 13C-Stable isotope resolved metabolomics uncovers dynamic biochemical landscape of gut microbiome-host organ communications in mice

description: Supplementary Material 10.
DOI: 10.6084/m9.figshare.26720667.v1
title: Additional file 10 of 13C-Stable isotope resolved metabolomics uncovers dynamic biochemical landscape of gut microbiome-host organ communications in mice

description: Supplementary Material 10.
DOI: 10.6084/m9.figshare.25834151
title: Additional file 1 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.25834151.v1
title: Additional file 1 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.25834242
title: Additional file 2 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.25834242.v1
title: Additional file 2 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 2.
DOI: 10.6084/m9.figshare.26720676
title: Additional file 3 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.26720676.v1
title: Additional file 3 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 3.
DOI: 10.6084/m9.figshare.26720679
title: Additional file 4 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.26720679.v1
title: Additional file 4 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 4.
DOI: 10.6084/m9.figshare.26720682
title: Additional file 5 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 5.
DOI: 10.6084/m9.figshare.26720682.v1
title: Additional file 5 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 5.
DOI: 10.6084/m9.figshare.26720685
title: Additional file 6 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 6.
DOI: 10.6084/m9.figshare.26720685.v1
title: Additional file 6 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 6.
DOI: 10.6084/m9.figshare.26720688
title: Additional file 7 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 7.
DOI: 10.6084/m9.figshare.26720688.v1
title: Additional file 7 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 7.
DOI: 10.6084/m9.figshare.26720691
title: Additional file 8 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 8.
DOI: 10.6084/m9.figshare.26720691.v1
title: Additional file 8 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 8.
DOI: 10.6084/m9.figshare.26720694
title: Additional file 9 of Maize miRNAs and their putative target genes involved in chilling stress response in 5-day old seedlings

description: Supplementary Material 9.
DOI: 10.15468/nnw3vr
title: Three new synonyms of Macromitrium japonicum Dozy & Molk. (Bryophyta, Orthotrichaceae) based on morphological and molecular evidence

description: This dataset contains the digitized treatments in Plazi based on the original journal article Li, Dandan, Li, Yuehan, Ren, Yan, Liu, Shutong, Yu, Jing, Guo, Shuiliang (2024): Three new synonyms of Macromitrium japonicum Dozy & Molk. (Bryophyta, Orthotrichaceae) based on morphological and molecular evidence. Cryptogamie, Bryologie 20 (3): 23-36, DOI: 10.5252/cryptogamie-bryologie2024v45a3, URL: https://sciencepress.mnhn.fr/sites/default/files/articles/pdf/bryologie2024v45a3.pdfABSTRACTMacromitrium japonicum Dozy & Molk. is an epiphytic moss mainly recorded from East Asia. To clarify its morphological variations and their potential genetic basis, we morphologically compared fourteen samples assigned to M. japonicum, and constructed a phylogenetic tree including these samples based on trn L-F, trn G and ITS2. On the phylogenetic tree, these fourteen samples formed a single clade, being characterized by the typical features of M. japonicum. Comparing the types of M. japonicum var. makinoi (Broth.) Nog., M. dickasonii Bartr. and M. polygonostomum Dixon & P. de la Varde with these samples, and the types of M. japonicum and its former synonyms including Dasymitrium incurvum Lind. and M. bathyodontum Cardot, we found that the variations of the former three species fall within the morphological variation range of the above fourteen samples and the types of M. japonicum, D. incurvum and M. bathyodontum. Therefore, we treated M. japonicum var. makinoi, M. dickasonii and M. polygonostomum as three new synonyms of M. japonicum. Macromitrium giraldii Müll.Hal. is excluded from the synonyms of M. japoncium and likely an acceptable species name. Additionally, M. japonicum is newly recorded for Myanmar.
DOI: 10.15468/zb32eu
title: A silicified Early Triassic marine assemblage from Svalbard

description: This dataset contains the digitized treatments in Plazi based on the original journal article Foster, William J., Danise, Silvia, Twitchett, Richard J. (2017): A silicified Early Triassic marine assemblage from Svalbard. Journal of Systematic Palaeontology 15 (10): 851-877, DOI: 10.1080/14772019.2016.1245680, URL: http://dx.doi.org/10.1080/14772019.2016.1245680
DOI: 10.6084/m9.figshare.30948503.v1
title: The relationship between miR-301b gene expression and infection with Pseudomonas aeruginosa isolated from different clinical sources

description: In this investigation, we found that P. aeruginosa is a common cause of many other types of infections, including UTIs and RTIs. In patients with P. aeruginosa infections, the miR-301b gene was shown to be overexpressed, especially in those who had infections in the respiratory and urinary tracts.
DOI: 10.15468/tmdgtq
title: Fourmis d'Afrique et de Madagascar.

description: This dataset contains the digitized treatments in Plazi based on the original journal article Santschi, F. (1912): Fourmis d'Afrique et de Madagascar. Annales de la Societe Entomologique de Belgique 56: 150-167, URL: http://antbase.org/ants/publications/3715/3715.pdf
DOI: 10.15468/jquiwk
title: Revision of Australian Meranoplus: the Meranoplus diversus group.

description: This dataset contains the digitized treatments in Plazi based on the original journal article Schoedl, (2007): Revision of Australian Meranoplus: the Meranoplus diversus group. In: Snelling, R. R., Fisher, B. L., Ward, P. S. (Eds): Advances in ant systematics (Hymenoptera: Formicidae): Homage to E. O. Wilson - 50 years of contributions. Memoirs of the American Entomological Institute 80: 370-424, URL: http://atbi.biosci.ohio-state.edu/HymOnline/reference-full.html?id=21287
DOI: 10.5281/zenodo.18066775
title: Relevant Data of QuanDT

description: Relevant data generated and used in the work of QuanDT.
DOI: 10.5281/zenodo.18066776
title: Relevant Data of QuanDT

description: Relevant data generated and used in the work of QuanDT.
DOI: 10.6084/m9.figshare.30958163
title: RhoBAST fluorogenic aptamer structures from Ren's Lab

description: This dataset contains the structural coordinates and corresponding density maps of the RhoBAST fluorogenic RNA aptamer, prepared to enable structure-based investigations of its mechanism of action. The collection includes both wild-type and mutant structures in apo (free) and ligand-bound states, providing a comprehensive basis for analyzing ligand recognition and the underlying mechanism.
DOI: 10.6084/m9.figshare.30958163.v1
title: RhoBAST fluorogenic aptamer structures from Ren's Lab

description: This dataset contains the structural coordinates and corresponding density maps of the RhoBAST fluorogenic RNA aptamer, prepared to enable structure-based investigations of its mechanism of action. The collection includes both wild-type and mutant structures in apo (free) and ligand-bound states, providing a comprehensive basis for analyzing ligand recognition and the underlying mechanism.
DOI: 10.15468/d2mt2r
title: Cimbicidae (Hymenoptera, ‘ Symphyta’) in the Paleogene: revision, the new subfamily Cenocimbicinae, and new taxa from the Eocene Okanagan Highlands

description: This dataset contains the digitized treatments in Plazi based on the original journal article Archibald, S. Bruce, Rasnitsyn, Alexandr P. (2023): Cimbicidae (Hymenoptera, ‘ Symphyta’) in the Paleogene: revision, the new subfamily Cenocimbicinae, and new taxa from the Eocene Okanagan Highlands. Zootaxa 5278 (1): 1-38, DOI: 10.11646/zootaxa.5278.1.1, URL: http://dx.doi.org/10.11646/zootaxa.5278.1.1AbstractWe erect the Cenocimbicinae, a new subfamily of Cimbicidae (Hymenoptera, Symphyta), restricted to the Selandian Menat Formation of France, the oldest occurrence of the family, and the Ypresian Okanagan Highlands of far-western North America. We describe new taxa from the Okanagan Highlands: Allenbycimbex morrisae gen. et sp. nov. and Leptostigma n. gen. with seven new species: L. alaemacula n. sp., L. brevilatum n. sp., L. fasciatum n. sp., L. longiclava n. sp., L. longipallidum n. sp., L. longitenebricum n. sp., and L. proxivena n. sp. We revise the Cimbicidae from the Ypresian Green River Formation and the Priabonian Florissant Formation, both in Colorado, USA. The oldest fossil of a modern cimbicid subfamily appears with a single pachylostictine specimen in the Green River Formation, and all Cimbicidae are in modern subfamilies after the Ypresian (we did not examine one larva known from Priabonian Baltic amber). Pseudocimbex clavatus Rohwer 1908 from the Florissant Formation is not a cimbicid; we treat it as Tenthredinoidea incertae sedis. We transfer Cimbex vetusculus Cockerell to Floricimbex n. gen.
DOI: 10.15468/ddky5z
title: Studies in the Liocranidae (Araneae): revision of Andromma Simon, 1893

description: This dataset contains the digitized treatments in Plazi based on the original journal article Bosselaers, Jan, Jocqué, Rudy (2022): Studies in the Liocranidae (Araneae): revision of Andromma Simon, 1893. European Journal of Taxonomy 850: 1-78, DOI: 10.5852/ejt.2022.850.1997, URL: http://dx.doi.org/10.5852/ejt.2022.850.1997Abstract. The genus Andromma Simon, 1893 is revised. The type species A. aethiopicum Simon, 1893 (♂ ♀) and the other three known species, A. anochetorum Simon, 1909 (♂), A. bouvieri Fage, 1936 (♀) and A. raffrayi Simon, 1899 (♂ ♀), are redescribed. The types of the subspecies A. raffrayi inhacorense Lessert, 1936 were not examined. This subspecies is considered a synonym of the nominal species. Nineteen new species are described and illustrated: A. albinovani sp. nov. (♂ ♀), A. alvoculatum sp. nov. (♀), A. anacardium sp. nov. (♀), A. cyamos sp. nov. (♀), A. cycnotrachelos sp. nov. (♂ ♀), A. delphiurum sp. nov. (♂ ♀), A. deogratias sp. nov. (♂ ♀), A. dicranobelos sp. nov. (♂), A. didrepanum sp. nov. (♂), A. divinagraciae sp. nov. (♂ ♀), A. elephantactes sp. nov. (♀), A. ghesquierei sp. nov. (♂ ♀), A. heligmos sp. nov. (♀), A. helix sp. nov. (♀), A. juakalyi sp. nov. (♂), A. katangensis sp. nov. (♀), A. ophiophagum sp. nov. (♀), A. prosopion sp. nov. (♀) and A. velum sp. nov. (♂ ♀). The distribution of the species and their apparent commensalism with termites are discussed.
DOI: 10.15468/dl.p4wbn6
title: Occurrence Download

description: A dataset containing 308 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pyrgus sidae",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1970",
 "Country is one of (Italy, Switzerland, Germany, Austria, Slovenia, France)"
 ]
}

 The dataset includes 308 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066802-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/b63jwy
title: Catalogue of terrestrial isopods (Isopoda, Oniscidea) from Peru, with new records of Circoniscus ornatus (Scleropactidae) and Ethelum americanum (Eubelidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ocampo-Maceda, Ana Teresa, Ruelas-Cabana, Carlos Miguel, López-Orozco, Carlos Mario, López-Tejeda, Evaristo Luciano (2022): Catalogue of terrestrial isopods (Isopoda, Oniscidea) from Peru, with new records of Circoniscus ornatus (Scleropactidae) and Ethelum americanum (Eubelidae). Nauplius (e 2022003) 30: 1-12, DOI: 10.1590/2358-2936e
DOI: 10.6084/m9.figshare.30958213
title: Protective effect of white mulberry (<i>Morus alba</i> Linn.) leaf extract against inflammatory responses and oxidative stress in obstructive nephropathy-related kidney damage

description: White mulberry leaf extract (WME) is known for its anti-inflammatory and antioxidative stress properties. Nevertheless, the mechanisms by which WME and its primary compound mitigate kidney damage in obstructive nephropathy remain unclear. This study investigates the efficacy of WME and chlorogenic acid (CGA) in suppressing inflammation and oxidative stress in animal models of obstructive nephropathy. Male Balb/c mice (<i>n</i> = 25) were randomly distributed into five groups: (1) the sham operation (SO) group, (2) the unilateral ureter obstruction (UUO) group, and UUO-induced mice treated with (3) enalapril (ENA), (4) WME, and (5) CGA. After the experiment, kidney organs were isolated for gene and protein analyses. Pro-inflammatory genes, including TLR-4, ICAM-1, and MCP-1, were measured using qPCR. The protein expression of TNF-<i>α</i> and NRF2 was examined using immunohistochemistry. The expression of TLR-4, ICAM1, and MCP-1 was downregulated in the WME and CGA groups (<i>p</i> &lt; 0.0001) compared with the UUO group. TNF-<i>α</i> expression was markedly lower in the WME and CGA groups (<i>p</i> &lt; 0.05) than in the UUO group. Furthermore, increased NRF2 protein expression demonstrated improved oxidative stress in the WME and CGA groups (<i>p</i> &lt; 0.05). These findings indicate that WME and CGA mitigate kidney damage in obstructive nephropathy.
DOI: 10.6084/m9.figshare.30958213.v1
title: Protective effect of white mulberry (<i>Morus alba</i> Linn.) leaf extract against inflammatory responses and oxidative stress in obstructive nephropathy-related kidney damage

description: White mulberry leaf extract (WME) is known for its anti-inflammatory and antioxidative stress properties. Nevertheless, the mechanisms by which WME and its primary compound mitigate kidney damage in obstructive nephropathy remain unclear. This study investigates the efficacy of WME and chlorogenic acid (CGA) in suppressing inflammation and oxidative stress in animal models of obstructive nephropathy. Male Balb/c mice (<i>n</i> = 25) were randomly distributed into five groups: (1) the sham operation (SO) group, (2) the unilateral ureter obstruction (UUO) group, and UUO-induced mice treated with (3) enalapril (ENA), (4) WME, and (5) CGA. After the experiment, kidney organs were isolated for gene and protein analyses. Pro-inflammatory genes, including TLR-4, ICAM-1, and MCP-1, were measured using qPCR. The protein expression of TNF-<i>α</i> and NRF2 was examined using immunohistochemistry. The expression of TLR-4, ICAM1, and MCP-1 was downregulated in the WME and CGA groups (<i>p</i> &lt; 0.0001) compared with the UUO group. TNF-<i>α</i> expression was markedly lower in the WME and CGA groups (<i>p</i> &lt; 0.05) than in the UUO group. Furthermore, increased NRF2 protein expression demonstrated improved oxidative stress in the WME and CGA groups (<i>p</i> &lt; 0.05). These findings indicate that WME and CGA mitigate kidney damage in obstructive nephropathy.
DOI: 10.15468/waz7bh
title: Contribution to Pentatomoidea (Hemiptera: Heteroptera: Pentatomomorpha) fauna of Tartous with a new record for Syria

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ali, Ali Yaseen (2021): Contribution to Pentatomoidea (Hemiptera: Heteroptera: Pentatomomorpha) fauna of Tartous with a new record for Syria. Journal of Insect Biodiversity and Systematics 7 (4): 365-374, DOI: 10.52547/jibs.7.4.365, URL: http://dx.doi.org/10.52547/jibs.7.4.365ABSTRACT. A three-year survey of species in the Superfamily Pentatomoidea was conducted during March and November of 2018 through 2020 in Tartous Province, Syria. The identified specimens belonging to four families; i.e. Pentatomidae (21 species), Scutelleridae (2 species), Dinidoridae and Cydnidae each with one species. This is the first faunistic study on the Pentatomoidea in the coastal area of Syria, Tartous. The results represented the first records of Tritomegas sexmaculatus (Rambur, 1839) and its host plants in Tartous, here considered as a newly recorded species for fauna of Syria.Received: 22 April, 2021Accepted: 12 August, 2021Published: 11 October, 2021Subject Editor: Farzad PakarpourKey words: Pentatomidae, Scutelleridae, Dinidoridae, Cydnidae, Syrian fauna
DOI: 10.15468/dl.pqw8ff
title: Occurrence Download

description: A dataset containing 2593837 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is 2023 Contributions of Plant Specimen Data inside China"
 ]
}

 The dataset includes 2593837 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066798-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30958202
title: Multidisciplinary exploration of genetic and computed tomography data of an Iron Age skull from Latvia with multiple lytic bone lesions

description: This table contains the exact information as provided in excel file, submitted with the manuscript.
DOI: 10.6084/m9.figshare.30958202.v1
title: Multidisciplinary exploration of genetic and computed tomography data of an Iron Age skull from Latvia with multiple lytic bone lesions

description: This table contains the exact information as provided in excel file, submitted with the manuscript.
DOI: 10.15468/tgqvuf
title: Modern taxonomic approaches to identifying diatrypaceous fungi from marine habitats, with a novel genus Halocryptovalsa Dayarathne & K. D. Hyde, gen. nov.

description: This dataset contains the digitized treatments in Plazi based on the original journal article Dayarathne, Monika C., Wanasinghe, Dhanushka N., Devadatha, B., Abeywickrama, Pranami, G, E. B., Jones, areth, Chomnunti, Putarak, Sarma, V. V., Hyde, Kevin D., Lumyong, Saisamorn, C., Eric H., Mckenzie (2020): Modern taxonomic approaches to identifying diatrypaceous fungi from marine habitats, with a novel genus Halocryptovalsa Dayarathne & K. D. Hyde, gen. nov. Cryptogamie, Mycologie 20 (3): 21-67, DOI: 10.5252/cryptogamie-mycologie2020v41a3, URL: http://dx.doi.org/10.5252/cryptogamie-mycologie2020v41a3KEY WORDS herbarium, mangroves, morphology, phylogen, new combinations, new species.
DOI: 10.15468/5k66fe
title: A new species of Medetera Fischer von Waldheim, 1819 (Diptera: Dolichopodidae) with a key to the species known from Iran

description: This dataset contains the digitized treatments in Plazi based on the original journal article Grichanov, I. Ya., Gilasian, E. (2023): A new species of Medetera Fischer von Waldheim, 1819 (Diptera: Dolichopodidae) with a key to the species known from Iran. Russian Entomological Journal 32 (3): 322-329, DOI: 10.15298/rusentj.32.3.08, URL: http://dx.doi.org/10.15298/rusentj.32.3.08
DOI: 10.15468/dl.3zuf73
title: Occurrence Download

description: A dataset containing 595 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pyrgus andromedae",
 "HasCoordinate is true",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1970",
 "Country is one of (Italy, Switzerland, Germany, Austria, Slovenia, France)"
 ]
}

 The dataset includes 595 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066804-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/b64x97
title: Review of Orchidaceae of the northern part of Kazakhstan

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kubentayev, Serik A., Efimov, Petr G., Alibekov, Daniyar T., Kupriyanov, Andrey N., Izbastina, Klara S., Khalymbetova, Aizhan E., Perezhogin, Yuri V. (2023): Review of Orchidaceae of the northern part of Kazakhstan. PhytoKeys 229: 185-213, DOI: http://dx.doi.org/10.3897/phytokeys.229.105457, URL: http://dx.doi.org/10.3897/phytokeys.229.105457
DOI: 10.5281/zenodo.18067730
title: Dataset_Influence of Instrumental Factors in the Measurement of Power Profiles of Intraocular Lenses with a Commercial Deflectometer. Appl. Sci. 2023, 13, 9882

description: Dataset with power profiles measured with a NIMO deflectometer for several intraocular lenses.

The aim of the study was to establish a protocol for measuring lens power maps and profiles of various optical designs of intraocular lenses with a deflectometer based on the phase-shifting Schlieren principle (NIMO TR1504, Lambda-X, Nivelles, Belgium).

Original article: https://doi.org/10.3390/app13179882
DOI: 10.5281/zenodo.18067731
title: Dataset_Influence of Instrumental Factors in the Measurement of Power Profiles of Intraocular Lenses with a Commercial Deflectometer. Appl. Sci. 2023, 13, 9882

description: Dataset with power profiles measured with a NIMO deflectometer for several intraocular lenses.

The aim of the study was to establish a protocol for measuring lens power maps and profiles of various optical designs of intraocular lenses with a deflectometer based on the phase-shifting Schlieren principle (NIMO TR1504, Lambda-X, Nivelles, Belgium).

Original article: https://doi.org/10.3390/app13179882
DOI: 10.15468/8qmmx4
title: Flora Helvetica - Geraniaceae

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Konrad Lauber, Gerhart Wagner, Andreas Gygax (2018): Flora Helvetica - Geraniaceae. In: Flora Helvetica. Bern: Haupt Verlag: 590-600, ISBN: 978-3-258-08047-5