cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/5jj-8q9-1b5
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/d33-alp-7wt
title: Tabulata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nar-vhn-0fw
title: Tabulata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fl9-axr-2ln
title: †Homoeospira Hall & Clarke, 1893

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vxd-334-jg9
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/afv-5l0-s62
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ypq-tys-fbc
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/40p-tms-anp
title: limestone

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8w5-a5w-3mn
title: Amphorichnus papillatus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/68j-fl3-aan
title: Halite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y7c-yf6-dxk
title: Tabor meteorite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5y8-20q-aqj
title: Tinguaite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/t3z-byx-9wb
title: Calymene

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/6x4-117-sva
title: Nuculida Dall, 1889

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fvg-rn2-c3y
title: Stibnite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28705895
title: Analysis of the distribution of CpG sites across the genomes of two Bat SARS-like coronaviruses, ZXC21 and ZC45 (2015-2017), using a sliding window approach.

description: This project analyzes the distribution of CpG sites across the genomes of two Bat SARS-like coronaviruses, ZXC21 and ZC45 (2015-2017), using a sliding window approach. Key findings include:<br>- CpG Counts : Both viruses exhibit regions with elevated CpG densities, suggesting potential functional significance.- Observed/Expected Ratios : Most regions show CpG depletion (O/E ratio &lt; 1), consistent with evolutionary pressures observed in coronaviruses.- Comparison : The results for ZXC21 and ZC45 are nearly identical, indicating similar CpG dynamics and evolutionary strategies.<br> Dataset Includes:- Tab-delimited files (`ZXC21_sliding_window_cpg_analysis.txt`, `ZC45_sliding_window_cpg_analysis.txt`) containing CpG counts and O/E ratios for each sliding window.- Visualizations: - Bar charts showing CpG counts across sliding windows for both viruses. - Line plots illustrating observed/expected (O/E) ratios for both viruses.- Python scripts used for performing the sliding window analysis and generating plots.- Input genome files (`MG772933.gb`, `MG772934.gb`).<br> Methods:The analysis was performed using the following steps:1. Divided the genomes into fixed-size windows (100 bp) with a step size of 50 bp.2. Calculated CpG counts and observed/expected (O/E) ratios for each window.3. Generated visualizations using Python libraries like Pandas and Matplotlib.<br> Implications:This work contributes to understanding the genomic architecture of Bat SARS-like coronaviruses and their evolutionary strategies. The findings align with broader trends observed in coronaviruses, highlighting shared mechanisms of CpG dynamics.<br>Published on Figshare: 10.6084/m9.figshare.28705895
DOI: 10.3535/0pw-e5q-nd4
title: Conglomerate

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ecy-64g-csr
title: Stibnite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28705895.v1
title: This project analyzes the distribution of CpG sites across the genomes of two Bat SARS-like coronaviruses, ZXC21 and ZC45 (2015-2017), using a sliding window approach.

description: This project analyzes the distribution of CpG sites across the genomes of two Bat SARS-like coronaviruses, ZXC21 and ZC45 (2015-2017), using a sliding window approach. Key findings include:<br>- CpG Counts : Both viruses exhibit regions with elevated CpG densities, suggesting potential functional significance.- Observed/Expected Ratios : Most regions show CpG depletion (O/E ratio &lt; 1), consistent with evolutionary pressures observed in coronaviruses.- Comparison : The results for ZXC21 and ZC45 are nearly identical, indicating similar CpG dynamics and evolutionary strategies.<br> Dataset Includes:- Tab-delimited files (`ZXC21_sliding_window_cpg_analysis.txt`, `ZC45_sliding_window_cpg_analysis.txt`) containing CpG counts and O/E ratios for each sliding window.- Visualizations: - Bar charts showing CpG counts across sliding windows for both viruses. - Line plots illustrating observed/expected (O/E) ratios for both viruses.- Python scripts used for performing the sliding window analysis and generating plots.- Input genome files (`MG772933.gb`, `MG772934.gb`).<br> Methods:The analysis was performed using the following steps:1. Divided the genomes into fixed-size windows (100 bp) with a step size of 50 bp.2. Calculated CpG counts and observed/expected (O/E) ratios for each window.3. Generated visualizations using Python libraries like Pandas and Matplotlib.<br> Implications:This work contributes to understanding the genomic architecture of Bat SARS-like coronaviruses and their evolutionary strategies. The findings align with broader trends observed in coronaviruses, highlighting shared mechanisms of CpG dynamics.<br>Published on Figshare: 10.6084/m9.figshare.28705895
DOI: 10.3535/361-ltl-cfp
title: †Holopea J. Hall, 1847

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pve-psl-sh8
title: Rhabdinopora flabelliforme flabelliforme (Eichwald, 1840)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mf9-elj-1ke
title: Breccia

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zdq-ras-efj
title: Pyrolusite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/c78-lpm-ech
title: Breccia

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/v7x-ekb-3px
title: †Holopea J. Hall, 1847

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/fgl-jas-5e4
title: Porphyry

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xhp-x40-trx
title: Tabulata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.15468/dl.jboe3v
title: Occurrence Download

description: A dataset containing 68975 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myiopsitta monachus (Boddaert, 1783)"
 ]
}

 The dataset includes 68975 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102847-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-44181
title: Station, 1802 Montana Avenue, Santa Monica, CA, 1933

description: 5 photographs of service station and workers, 1802 Montana Avenue, Santa Monica, CA, 1933. "Subject: Station, Santa Monica, 1802 Montana St[reet], 2nd trip; Client: Union Oil; Original Print Order: 1 ea[ch]; Size: 8x10, 5x7; Finish: gl[ossy], gl[ossy] for files; Year: 1933; Job: 6-27-138" -- on envelope front. "Operator's Report Name: Joe; 5--8x10; Amount: 13.00" -- on envelope back.
DOI: 10.15468/dl.adrdro
title: Occurrence Download

description: A dataset containing 2210 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pecari Reichenbach, 1835",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-113.75 13.39,-113.75 29.63,-86.20 29.63,-86.20 13.39,-113.75 13.39))"
 ]
}

 The dataset includes 2210 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102849-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0boy2l
title: Occurrence Download

description: A dataset containing 2571 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nasua narica (Linnaeus, 1766)",
 "HasGeospatialIssue is false",
 "Geometry POLYGON((-113.75 13.39,-113.75 29.63,-86.20 29.63,-86.20 13.39,-113.75 13.39))"
 ]
}

 The dataset includes 2571 records from 71 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102850-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.auftos
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Opuntia ficus-indica (L.) Mill.",
 "Country is Brazil",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "Geometry POLYGON((-84.375 15.284185,-84.375 -40.979898,-27.421875 -40.979898,-27.421875 15.284185,-84.375 15.284185))",
 "Geometry POLYGON((148.01 -77.24,148.01 82.35,-131.13 82.35,-131.13 -77.24,148.01 -77.24))"
 ]
 },
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 12 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102851-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kgfwr3
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Adenophorus oahuensis (Copel.) L.E.Bishop"
 ]
}

 The dataset includes 60 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005446-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-3801
title: County Hospital, Fallgren Co., Los Angeles, CA, 1931

description: 8 photographs of hospital construction, Los Angeles, CA, 1931. "Subject: County Hospital; Client: Fallgren Co.; Original Print Order: 1 each; Size: 8 1/2 x 11; Finish: Linen; Year: 1931; Job: 10-27-158" -- on envelope front. "Name: Frank & George; 8 - 8 1/2 x 11 linen: 10.00; 2-o[unces]; 2 Ounces of Flash Powder @0.85: 1.70; Extra Charges: #972" -- on envelope back.
DOI: 10.15468/dl.nnhr6n
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (Paleobiology Database, Palaeobiology - Vertebrate Fossils Collection - Mammalia - Royal Ontario Museum)",
 "TaxonKey is Crocuta crocuta (Erxleben, 1777)"
 ]
}

 The dataset includes 159 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005448-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kxivmb
title: Occurrence Download

description: A dataset containing 5602592 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sturnus vulgaris"
 ]
}

 The dataset includes 5602592 records from 789 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102852-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-44198
title: Ford coupe and Buick mark, Southern California, 1934

description: 8 photographs of Ford coupe and Buick mark, M. Cohen assured, Aetna Insurance Co., Southern California, 1934. "Subject: Ford coupe and Buick mark, M. Cohen, assured; Client: Aetna Ins[urance] Co., Mr. Pratt; Original print order: 2 ea[ch]; Size: 8x10; Finish: gl[ossy]; Year: 1934; Job: 1-4-11" -- on envelope front. "Original photographs-Size: 8, 8x10, two locations, In City, 12.00; Operator's report (Name): Dean" -- on envelope back.
DOI: 10.15468/dl.fs4yx3
title: Occurrence Download

description: A dataset containing 223191 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dendrocygna javanica (Horsfield, 1821)",
 "HasCoordinate is true",
 "Year is greater than or equal to 1970",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 223191 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005434-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tvsb3n
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Myrmelastes P.L.Sclater, 1858",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102855-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ubljbj
title: Occurrence Download

description: A dataset containing 8374 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Podilymbus podiceps (Linnaeus, 1758)",
 "Country is Mexico"
 ]
}

 The dataset includes 8374 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102858-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/whit-c170-42685
title: Cosmetic Christmas gifts, Southern California, 1934

description: 28 photographs of cosmetics, Southern California, 1934. "Subject: Articles for Xmas number; Client: Bullocks Dep[artmen]t Store; Original Print Order: 1 ea[ch]; Size: to size; Job: 10-17-94-B; Year: 1934" -- on envelope front. "Original Photographs-Size: 28, charged in #10-17-94A" -- on envelope back.
DOI: 10.15468/dl.iw9kcf
title: Occurrence Download

description: A dataset containing 976 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Automolus infuscatus (P.L.Sclater, 1856)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 976 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102861-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.brim5j
title: Occurrence Download

description: A dataset containing 5575 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Podiceps nigricollis C.L.Brehm, 1831",
 "Country is Mexico"
 ]
}

 The dataset includes 5575 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102863-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r0gqw4
title: Occurrence Download

description: A dataset containing 3332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cynanthus sordidus (Gould, 1859)",
 "Country is Mexico",
 "Geometry POLYGON((-92.285156 14.944784,-90.703125 15.961329,-91.054687 17.140790,-89.296875 17.476432,-87.539062 18.812717,-86.835937 20.961439,-89.296875 20.961439,-91.230468 18.312810,-94.921875 18.145851,-97.207031 21.453068,-97.382812 25.799891,-98.789062 26.273714,-101.777343 29.535229,-103.183593 28.921631,-107.226562 31.503629,-110.039062 31.203404,-116.191406 32.249974,-113.90625 27.683528,-111.621093 24.686952,-109.6875 22.593726,-110.039062 23.885837,-111.269531 26.115985,-113.90625 29.382175,-113.378906 30.902224,-111.445312 28.149503,-108.632812 25.165173,-104.941406 20.138470,-101.777343 17.811456,-96.152343 15.453680,-92.285156 14.944784))"
 ]
}

 The dataset includes 3332 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102864-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p9tmky
title: Occurrence Download

description: A dataset containing 10030 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nematomorpha"
 ]
}

 The dataset includes 10030 records from 215 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005449-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zyukp7
title: Occurrence Download

description: A dataset containing 11137 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Achillea filipendulina Lam.)"
 ]
}

 The dataset includes 11137 records from 255 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005450-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17909/19rp-r511
title: Accompanying data for "Deep JWST spectroscopy of galaxies in a candidate ionized bubble at z=8.7: probing reionization at pMpc scales with Lyα emission"

description: Strong Lyα emission observed from galaxies when the Universe is expected to be highly neutral is thought to trace large ionized regions that facilitate the transmission of Lyα through the IGM. In this work, we use deep JWST Lyα spectroscopy to constrain the size of a candidate ionized bubble at z∼8.7 in the EGS field, with a potential radius of Rb=2 physical Mpc (pMpc) or larger. We measure a photometric galaxy density and find that the volume is a factor of ∼2.5−3.6 overdense, suggesting that there may be a large population of galaxies capable of creating an Rb∼2 pMpc bubble. Then, we infer the Lyα transmission through the IGM for galaxies in the EGS volume using our deep spectroscopy, finding IGM=0.26+0.25−0.14. This transmission is consistent with the average at z∼9 and is mildly inconsistent with the transmission expected for an Rb∼2 pMpc bubble (IGM,2pMpc=0.53−0.63), implying that such a large bubble is unlikely to be present. However, the photometric galaxy density in the EGS field is larger than in several other deep fields. This overdensity and the moderate Lyα transmission may be consistent with smaller, Rb∼0.5−1 pMpc bubbles in EGS. This additionally motivates the need for future wider area Lyα spectroscopy in EGS and other fields to obtain a more representative understanding of the sizes of ionized bubbles in the early stages of reionization, and the properties of the galaxies that create them.
DOI: 10.15156/bio/sh1108073.10fu
title: SH1108073.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1108074.10fu
title: SH1108074.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1108075.10fu
title: SH1108075.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.