cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3644553.v1
title: Supplementary Material for: Adverse Events Following International Normalized Ratio Reversal in Intracerebral Hemorrhage

description: <b><i>Background:</i></b> Prothrombin complex concentrates (PCCs) are frequently used to reverse the effect of vitamin K antagonists (VKAs) in patients with non-traumatic intracerebral hemorrhage (ICH). However, information on the rate of thromboembolic events (TEs) and allergic events after PCC therapy in VKA-ICH patients is limited. <b><i>Methods:</i></b> Consecutive VKA-ICH patients treated with PCC at our institution between December 2004 and June 2014 were included into this retrospective observational study. We recorded international normalized ratio (INR) values before and after PCC treatment, baseline clinical characteristics including the premorbid modified Rankin Scale (pmRS) score, TE and allergic event that occurred during the hospital stay. All events were classified by 3 reviewers as being ‘related', ‘probably related', ‘possibly related', ‘unlikely related' or ‘not related' to treatment with PCC. To identify factors associated with TEs, log-rank analyses were applied. <b><i>Results:</i></b> Two hundred and five patients were included. Median INR was 2.8 (interquartile range (IQR) 2.2-3.8) before and 1.3 (IQR 1.2-1.4) after PCC treatment and a median of 1,500 IU PCC (IQR 1,000-2,500) was administered. Nineteen TEs were observed (9.3%); none were classified ‘related' but 9 were classified as ‘possibly' or ‘probably related' to PCC infusion (4.4%). One allergic reaction (0.5%), ‘unlikely related' to PCC, was observed. In the whole cohort, PCC doses &gt;2,000-3,000 IU, ICH volumes &gt;40 ml, National Institute of Health Stroke Scale values &gt;10 and a pmRS &gt;2 were associated with the development of TEs (p = 0.031, p = 0.034, p = 0.050 and p = 0.036, respectively). <b><i>Conclusions:</i></b> Overall, INR reversal with PCC appears safe. Though no clear relationship between higher PCC dosing and TEs was observed, PCC doses between &gt;2,000 and 3,000 IU and higher morbidity at ICH onset were associated with TEs. Hence, individual titration of PCC to avoid exposure to unnecessarily high doses using point-of-care devices should be prospectively explored.<br>
DOI: 10.17632/g7vbwsxzcy
title: CATSA: A Wrist Worn Wearable Dataset for Stress Analysis

description: The CATSA dataset is a publicly accessible multimodal dataset comprising wearable signals designed for stress and cognitive task analysis. It primarily captures physiological responses under baseline conditions and during induced cognitive tasks from a wearable device. The dataset is organized within a root folder named CATSA, which contains 50 subfolders, each corresponding to an individual participant and labeled as subXY, where XY represents an incrementing numerical identifier. Within each participant’s folder, there are four subdirectories named Baseline, Stroop, Logic, and Sudoku, corresponding to different experimental conditions. Each of these subdirectories contains five CSV files that store data recorded by the wrist-worn Empatica E4 device, including Blood Volume Pulse (BVP), Electrodermal Activity (EDA), Accelerometer data (ACC), Body Temperature (TEMP), and Heart Rate (HR).
DOI: 10.17632/zpyp4rmb43
title: Zircon U-Pb age and Hf-O isotope evidence of the Taihua Complex on the southern margin of the North China Craton: Implications for its magmatic process during the early Paleoproterozoic

description: Data and Supplementary Information for Chen and others, 2024 - Zircon U-Pb age and Hf-O isotope evidence of the Taihua Complex on the southern margin of the North China Craton: Implications for its magmatic process during the early Paleoproterozoic. Accepted for publication in American Journal of Science.

Supplementary Table S1: Summary of the samples and sampling positions in this study. Supplementary Table S2: U-Pb age data for zircons of metamorphic rocks in this study. Supplementary Table S3: Zircon Lu-Hf isotopic compositions of metamorphic rocks in this study. Supplementary Table S4: Zircon O isotopes of metamorphic rocks in this study. Supplementary Table S5: Compilation of zircon U–Pb ages and Hf-O isotopic data of the North China Craton during the ~2.3–2.2 Ga.
DOI: 10.6084/m9.figshare.13121861.v1
title: A Qualitative analysis of factors related to unsafe work behaviours among environmental service workers in the COVID-19 era: perspectives of workers, and safety managers. The case of government hospitals in Addis Ababa Ethiopia

description: Two qualitative data gathering methods, namely individual in-depth interviews and key informant interviews were used on purposively selected environmental service workers and infection prevention and patient safety specialists. a total of 25 participants were recruited from three Corona virus treatment facilities interviews were recorded and transcribed in Amharic (the local language) and then translated to English. open code 4.2 was used for thematic analysis.
DOI: 10.6084/m9.figshare.14472804.v1
title: Supplementary Material for: Prognostic Value of Early Magnetic Resonance Imaging Patterns in Sudden Hearing Loss

description: <b><i>Introduction:</i></b> Sudden sensorineural hearing loss (SSHL) is a relatively frequent disease, but a sensitive marker or a reliable test to identify the underlying cause is still unavailable. Neuroradiology appears to offer the most promising tools, especially magnetic resonance imaging (MRI). In a recent study from our group, we explored the ability of MRI to detect subtle changes in the inner ear compartments by means of a 3D-fluid-attenuated inversion recovery sequence, aiming at identifying 3 distinct MRI patterns (haemorrhagic, inflammatory, brain-labyrinth barrier breakdown). In the present study, we contrasted the MRI patterns at onset with relevant prognostic factors, with the audiological features of each patient’s SSHL and with treatment outcomes. <b><i>Methods:</i></b> In this retrospective study, we enrolled 50 adult subjects (54.61 ± 18.26 years) with SSHL. They underwent an MRI within 72 h from admission, and 5 audiological evaluations: at admission, on the 5th day after the start of medical therapy, at the end of the first cycle of hyperbaric oxygen therapy, then 1 and 6 months later. <b><i>Results:</i></b> Abnormalities of the MRI signal and/or post-contrast enhancement asymmetry of the cochlea (“pattern+ MRI”) correlated with worse audiological outcomes at 1 month, but the different MRI patterns were not correlated with any specific prognostic model, despite rigid protocol settings. However, a significant difference was found for low-tone SSHL, which were always “pattern<i>”</i> negative at MRI (<i>p</i> = 0.01), and for profound SSHL which demonstrated a pattern+ MRI in 80% (<i>p</i> = 0.04). At the onset of SSHL, a pattern+ MRI was found in 29/50 cases (58.0%) and was related with lesser degree of recovery of pure-tone average at 1 month and lesser chance to retain the hearing threshold benefit in the long term. Given the limited numbers of patients enrolled so far, the relative impact of comorbidities on each MRI pattern remains uncertain. At 6 months, we observed a trend of greater and more stable recovery (<i>p</i> = 0.023) and less frequent recurrence of SSHL in patients with a normal MRI. <b><i>Conclusions:</i></b> The 3 observed MRI patterns did not correlate consistently with specific audio-vestibular features or any peculiar aspect of the patient’s clinical history. Larger series of patients with SSHL are needed, possibly from multicentric studies.
DOI: 10.6084/m9.figshare.24995759.v2
title: Genome assembly of <i>Clitoria ternatea</i>

description: The chromosome-level reference genomes of Clitoria ternatea, the genome size is 1.7Gb, contig N50 is 126 Mb, scaffold N50 is 169Mb.
DOI: 10.6084/m9.figshare.28334918.v1
title: 50w.zipGeological map of eight provinces in Southwest China

description: this is a Geological map of eight provinces in Southwest ChinaGeological map of eight provinces in Southwest China
DOI: 10.17632/wj766p2w9t
title: Tensile performance data of 3D printed photopolymer gyroid lattices created using a range of base materials and lattice porosities

description: This dataset is for the Data in Brief article: "Tensile Performance Data of 3D Printed Photopolymer Gyroid Lattices". Individual CSV files for each printed and mechanically tested lattice sample are contained in the "Raw Mechanical Data" folder, and the measured porosity values for these samples are contained in "Porosity_data.xlsx". The three-letter acronym appended to each sample name corresponds to the material used to print that sample. The full material names and printers used to print samples of each material can be found in "Materials_table.pptx". Mechanical properties for each sample were extracted from the individual stress-strain curves using a custom MATLAB script, and both the extracted properties and script are available in the "MATLAB" folder. Data and results for the finite element simulations performed in the corresponding research article for the Data in Brief article are available in "FEA_data.xlsx". For additional information about the dataset, including specific steps for how the data was obtained, see the Data in Brief article mentioned above.
DOI: 10.6084/m9.figshare.14724696.v2
title: Sex ratio at birth projections by Vietnam region from 2021 to 2050

description: <b>S3 Dataset. Sex ratio at birth projections by Vietnam region from 2021 to 2050.</b><b><br></b><b>Dataset for:</b>Chao F, Guilmoto CZ, Ombao H (2021) Sex ratio at birth in Vietnam among six subnational regions during 1980–2050, estimation and probabilistic projection using a Bayesian hierarchical time series model with 2.9 million birth records. PLoS ONE 16(7): e0253721. https://doi.org/10.1371/journal.pone.0253721<b><br></b>
DOI: 10.6084/m9.figshare.20373585.v1
title: BRATS2017.zip.zip

description: BRATS Dataset
DOI: 10.6084/m9.figshare.21601518.v1
title: data.sav

description: Data in SPSS
DOI: 10.6084/m9.figshare.28334949.v1
title: Phase-Type Distributions for Sieve Estimation

description: In many semiparametric models, the infinite-dimensional parameter of direct interest is a probability density, but its nonparametric estimation is usually difficult in the presence of incomplete data. To address this issue, this study promotes phase-type distributions as a method of sieve. Phase-type distributions are dense in the space of nonnegative distributions, closed under minimum, maximum, and convolution, and compatible with the accelerated failure time model. This renders them attractive for sieve density estimation for problems with sophisticated missing data. However, the class of phase-type distributions is over-parameterized, and its approximation error rate for a given density as the number of phases increases remains unknown. These handicaps hinder its theoretical development as a sieve method. In this article, we design a sieve class of identifiable phase-type densities and establish its approximation error rate for a given density, which is the first error rate result known for phase type distributions. The proposed sieve is then used for semiparametric M-estimation, where the nonparametric component is a density. Building on the approximation error rate results, we establish general asymptotic properties of the phase-type sieve estimators and apply them to models that have complicated data missingness and cannot be easily handled by existing methods. Our simulation and real data analysis focus on right-censored data with missing indicators, in which we demonstrate that our estimators are more efficient than existing estimators. Supplementary materials for this article are available online, including a standardized description of the materials available for reproducing the work.
DOI: 10.6084/m9.figshare.7261832.v1
title: JARVIS DFT Data

description: Various properties of 25,923 bulk materials and 636 2D materials computed with the OptB88vdW and TBmBJ functionals taken from the JARVIS DFT database. <br><br>This dataset was modified from the JARVIS DFT database developed by NIST (1-4). The column naming scheme has been revised, a composition column created, and several columns removed.<br><br>Data is available as Monty Encoder encoded JSON and as the source Monty Encoder encoded JSON file. Recommended access method is with the matminer Python package using the datasets module.<br>Note on citations: If you found this dataset useful and would like to cite it in your work, please be sure to cite its original sources below rather than or in addition to this page.<br>3D Dataset discussed in: <br>Elastic properties of bulk and low-dimensional materials using van der Waals density functional Kamal Choudhary, Gowoon Cheon, Evan Reed, and Francesca Tavazza Phys. Rev. B <b>98</b>, 014107<br>Original 3D Data file sourced from:choudhary, kamal; https://orcid.org/0000-0001-9737-8074 (2018): jdft_3d.json. figshare. Dataset.<br>2D Dataset discussed in: <br>High-throughput Identification and Characterization of Two dimensional Materials using Density functional theoryKamal Choudhary, Irina Kalish, Ryan Beams & Francesca Tavazza <i>Scientific Reports </i><b>volume 7</b>, Article number: 5179 (2017)<br>Original 2D Dataset sourced from:choudhary, kamal; https://orcid.org/0000-0001-9737-8074 (2018): jdft_2d-7-7-2018.json. figshare. Dataset.
DOI: 10.17632/p73b8byghp
title: Healthy-Defective-Fruits

description: Dataset Apples Images
The developed data set consists of 5,000 real and synthetic images of fresh apples, and 5,000 real and synthetic images of apples with defects.

Dataset Mangoes Images
The developed data set consists of 5,000 real and synthetic images of fresh mangoes, and 5,000 real and synthetic images of mangoes with defects.
DOI: 10.6084/m9.figshare.16910164.v5
title: Depth-dependent drivers of soil microbial necromass carbon across Tibetan alpine grasslands

description: This dataset is composed of plant carbon input and and soil physicochemical<i> </i>properties (e.g., soil temperature, soil moisture, microbial biomass carbon)<i>, </i>and soil microbial necromass carbon of 36 sites on the Tibetan Plateau.<br><br>
DOI: 10.6084/m9.figshare.19623768.v2
title: SkyTruth - Surface Mining in Central Appalachia - Site Recovery Data

description: This data is published in Restoration Ecology, in the article Mines to Forests? Analyzing long-term recovery trends for surface coal mines in Central Appalachia.<br> These data contain detail the recovery of post-mining landscapes in Central Appalachia. The data is provided in various formats: processedData_lastMinedBefore_2015_gte10px_gompertzData.csv - this contains analyzed data for NBR, NDMI, and NDVI, the annual band date per site is not available in this file, see other data files provided. processedData_analysisBands_PES_lastMinedBefore_2015_gte10px_gompertzData.csv/.geojson - This is the analysis ready dataset, and it contains the annual data only for those indices used in our analysis (NBR, NDMI, NDVI). processedData_allBands_PES_lastMinedBefore_2015_gte10px_gompertzData.csv/.geojson - This is the full dataset, it contains all band and index data, including those not used over the course of our analysis. For all data, only sites last mined before 2015, and greater than or equal to 10 pixels in size are included.
DOI: 10.6084/m9.figshare.9770807.v2
title: Twitter Sentiment Analysis Data

description: This excel work book includes NRC sentiment analysis for all hashtags, #pride tweets, #lesbian tweets, #pride NRC scores, # lesbian NRC scores, all sentiment scores in the syuzhet package for #pride and lesbian, lexicon comparison, #lesbian subsamples and #pride subsamples.
DOI: 10.6084/m9.figshare.13328807.v2
title: Raw Data - AWAG Assessments Anonymised.csv

description: AWAG assessment raw data for 'Assessment of welfare of experimental cattle and pigs using the Animal Welfare Assessment Grid' submission to <i>Animals</i>.<b></b>
DOI: 10.6084/m9.figshare.4557667.v1
title: Wound-healing_patent_data

description: wound-healing patent data
DOI: 10.17632/57c3jcsr3j
title: Building Energy Profiles: A Geospatial Dataset for Dublin, Ireland

description: Central to our investigation is the Building Energy Rating (BER) dataset of Ireland, sourced from GeoDirectory data. This dataset provides a foundational resource, encompassing a comprehensive range of building-scale parameters such as detailed addresses, geocode data (latitude and longitude), area, height, number of floors, roof type, construction age, radon emission, HVAC system details, and bedroom and bathroom counts.
To enrich this dataset, we incorporated additional features from the Digital Landscape Models (DLM) Core Data from Tailte Éireann Surveying (PRIME2 Dataset). These enhancements include metrics such as nearest neighbor buildings, the density of the built environment surrounding each building, and district attributes like the ratio of green area to non-green area in the urban vicinity.
Dataset Compilation:
After carefully considering various data acquisition methods to capture building-scale and neighborhood-scale features, including both geometric and non-geometric attributes, as well as information about the surrounding built environment, we compiled a comprehensive dataset. Due to data protection policies, specific spatial details such as latitude, longitude, and addresses were omitted. However, the remaining data, aligned with our data acquisition objectives, is structured into a CSV file available in the mentioned repository.
Key Features:
1. Building-Scale Attributes:
o Identification and Location: Building ID, detailed address (excluding specific spatial details for privacy), geocode data.
o Structural Details: Area, height, number of floors, roof type, construction age.
o Energy and Environmental Data: BER rating, radon emission, HVAC system details.
o Additional Metrics: Estimated number of bedrooms and bathrooms, water heating source, space heating source.
2. Neighborhood-Scale Attributes:
o Environmental Context: Soil composition, presence of water bodies and green spaces, built-up areas.
o Urban Infrastructure: Roads, pathways, networks, and other land uses.
o Spatial Relationships: Built environment density, district green and non-green area, and land cover specification.
Acknowledgment: 
We would like to thank the funder of the project, Science Foundation Ireland (SFI) under the NexSys SFI/21/SPP/3756 programme. We also thank to CEO, Tailte Éireann (acting on behalf of the Government of Ireland) to
reproduce Tailte Éireann – Surveying maps and data for the annual copyright licence, CYAL50402364, © Tailte Éirean.n – Surveying.
DOI: 10.17632/96v2wbzwpx
title: Hypoglycemia Promotes Breakdown of the Blood-Retinal Barrier and Retinal Vascular Leakage in Diabetic Mice

description: RNAseq data and HIF targets list
DOI: 10.6084/m9.figshare.12993389.v1
title: Supplementary Material for: Real World Use and Effects of Calcimimetics in Treating Mineral and Bone Disorder in Hemodialysis Patients

description: <b><i>Background:</i></b> Calcimimetics are used to treat mineral and bone disorder by reducing parathyroid hormone (PTH), calcium (Ca), and phosphorus (Phos). The study objectives were to assess the control of PTH, Ca, and Phos over time in patients receiving cinacalcet or etelcalcetide as well as dosing and time to discontinuation for etelcalcetide. <b><i>Methods:</i></b> This was a retrospective cohort study using electronic medical records from small and independent dialysis centers. Adults ≥18 years of age were identified as cinacalcet or etelcalcetide users based on the first calcimimetic received in 2018 (index date). Patients were followed from the index date until parathyroidectomy, kidney transplant, death, or end of data (December 31, 2018). Analyses of mean PTH, Ca, and Phos, as well as target achievement of PTH, Ca, and Phos were conducted over a 9-month period. Discontinuation with etelcalcetide was measured with the Kaplan-Meier estimator. <b><i>Results:</i></b> There were 1,346 cinacalcet patients (mean age 60.5 years, 43.5% female, and 47.1% Black) and 1,255 etelcalcetide patients (mean age 63.4 years, 46.6% female, and 38.5% Black). At baseline, the proportions in target were similar for etelcalcetide versus cinacalcet: 36 versus 38% for PTH, 79 versus 80% for Ca, and 43 versus 44% for Phos. Overall, 40–47% of cinacalcet users and 48–62% of etelcalcetide users were observed to be in target for PTH over 9 months. The proportion in target for Phos ranged from 41 to 46% for cinacalcet and 46–51% for etelcalcetide. The proportion in target for Ca ranged from 74 to 78% for cinacalcet and 60–73% for etelcalcetide. Etelcalcetide 12-month discontinuation was 37.4%. <b><i>Conclusion:</i></b> Both calcimimetics were effective in keeping PTH, Ca, and Phos levels within target. Patients receiving etelcalcetide tended to have lower laboratory values for PTH, Ca, and Phos over time, while patients receiving cinacalcet tended to be more likely to be in target for Ca over time.
DOI: 10.6084/m9.figshare.21343662.v2
title: Carbon Sequestration of the Middle Miocene Sunda Shelf Facilitated Global Climate Change

description: These are supplementary tables for the paper "Carbon sequestration of the middle Miocene Sunda Shelf facilitated global climate change" by Ma et al. (2022). Table S1 includes stratigraphic thickness and shale/mudstone proportions of the MCO and MMCT strata constrained by drilling sites. Table S2 includes the TOC and S2 data collected from the published literature. Tables S3 are the lower, median, and upper estimates for the organic carbon burial of the sedimentary polygons during the MCO and MMCT periods.
DOI: 10.17632/tgn8xwdr8v
title: Screening dataset of food components that inhibit transcriptional activity of FOXO1

description: List of food-derived and natural compounds and their values of reporter activity as FOXO1-transcriptional inhibitors. Vehicle alone serves as the reference value (set as 100). Data are expressed as mean ± SE (No.1-404: N = 3, No. 405-524: N = 2). Statistical analyses were performed using the Student's two-tailed unpaired t-test. ***P &lt; 0.001, **P &lt; 0.01, *P &lt; 0.05 compared with the samples in the presence of vehicle alone.

HEK293T cells were transfected with GAL4-FOXO1 or GAL4-FOXO3a, (UAS)4-Luc and phRL-TK Luc. Each compound was added and incubated for 20 h and luciferase assay was performed. Final concentrations: 1 nM, 10 nM, 100 nM, 1 µM, 10 µM. Data are expressed as mean ± SE (N = 4). Statistical analyses were performed using 1-way analysis of variance (ANOVA) with Dunnett’s post-hoc test. ***P &lt; 0.001, **P &lt; 0.01, *P &lt; 0.05 compared with the samples in the presence of vehicle alone.
DOI: 10.6084/m9.figshare.24511759.v1
title: Transforming Membrane Distillation to a Membraneless Fabric Distillation for Desalination

description: Results from AGFD experiments and module-scale modeling of different MD and FD configurations.
DOI: 10.17632/jsd8rfdgch
title: Indonesian song lyrics

description: This dataset contains 400 Indonesian song lyrics. Each of 100 data are tagged as "children", "teenager", "adult", and "all-age" class.
DOI: 10.6084/m9.figshare.19146008.v1
title: pdxe_mut_and_cn2.txt.gz

description: Raw data table without excel gene name conversion issues in supplementary table 1 from Gao et al "High-throughput screening using patient-derived tumor xenografts to predict clinical trial drug response"
DOI: 10.6084/m9.figshare.21626180.v2
title: Defect Datasets

description: Defect Density Dataset
DOI: 10.6084/m9.figshare.22292683.v1
title: scRNAdata2

description: We characterized the immune context in HPV+ and HPV− HNSCC by integrating scRNA-seq and bulk RNA-seq data.