cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.95944
title: Gaussian Job Archive for C10H8N6

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95957.v1
title: Text Encoding Initiative Powerpoint Presentation

description: Presentation of Text Encoding Initiative to Information Sciences Graduate level Class, Digital Humanitites, of the University of Tennessee, Summer 2012. This presentation was added as a test of the figshare functionality.
DOI: 10.6084/m9.figshare.95944.v1
title: Gaussian Job Archive for C10H8N6

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95942
title: Gaussian Job Archive for C12H14

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95943
title: Gaussian Job Archive for C8H10N4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95957.v2
title: Text Encoding Initiative Powerpoint Presentation

description: Presentation of Text Encoding Initiative to Information Sciences Graduate level Class, Digital Humanitites, of the University of Tennessee, Summer 2012. This presentation was added as a test of the figshare functionality.
DOI: 10.6084/m9.figshare.95941
title: Gaussian Job Archive for C5H6Cl2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95949.v1
title: Raw flow cytometry data

description: Day: Day of the measure<br> Treatment: Experimental treatment<br> Other columns are the parameters for each object (bacteria)
DOI: 10.6084/m9.figshare.95942.v1
title: Gaussian Job Archive for C12H14

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95943.v1
title: Gaussian Job Archive for C8H10N4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95941.v1
title: Gaussian Job Archive for C5H6Cl2

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95949.v2
title: Raw flow cytometry data1

description: Day: Day of the measure<br> Treatment: Experimental treatment<br> Other columns are the parameters for each object (bacteria)
DOI: 10.6084/m9.figshare.95929
title: Archive of FASTA-formatted files containing predicted proteins for each genome

description: A g-zipped archive with 347 text files containing the predicted proteins found by at least one of the gene finders Prodigal, Glimmer or GeneMarkHMM for each genome.
DOI: 10.6084/m9.figshare.95940.v1
title: Rise and Fall of Mutator Bacteria - The Evolution of Mutation Rates in Bacteria

description: This presentation was given at the BioMath Students Journal Club at Tel-Aviv University on May 2011. The evolution of the mutation rate in bacteria is a long-standing research theme for theoretical evolutionary biologists. As mutations are deleterious more often than not, the mutation rate is expected to be minimized. But because beneficial mutations are the ultimate source of adaptation in asexual populations, an elevated mutation rate is not always a bad thing. I will present a number of theoretical results and discuss my own work on the evolution of stress-induced mutators. The main articles discussed are: Leigh. Natural Selection and Mutability The American Naturalist, 1970 Taddei, Radman, Maynard-Smith, Toupance, Gouyon & Godelle. Role of mutator alleles in adaptive evolution. Nature, 1997 Ram & Hadany. The Evolution of Stress-Induced Hypermutation in Asexual Populations. Evolution, 2012.
DOI: 10.6084/m9.figshare.95928
title: The 347 text files show the results from scanning each of the fasta-files against the Pfam-A database

description: The 347 text files show the results from scanning each of the fasta-files against the Pfam-A database.
DOI: 10.6084/m9.figshare.95939.v1
title: The Evolution of Stress-Induced Mutagenesis in Finite and Infinite Populations

description: This presentation was given at PopGroup45 in Nottingham, UK on January 2012. Abstract: Numerous empirical studies show that stress of various kinds induces a state of hypermutation in bacteria via multiple mechanisms, but theoretical treatment of this intriguing phenomenon is lacking. We used deterministic and stochastic models to study the evolution of stress-induced hypermutation in infinite and finite-size populations of bacteria undergoing selection, mutation, and random genetic drift in constant environments and in changing ones. Our results suggest that if beneficial mutations occur, even rarely, then stress-induced hypermutation is advantageous for bacteria at both the individual and the population levels and that it is likely to evolve in populations of bacteria in a wide range of conditions because it is favored by selection. These results imply that mutations are not, as the current view holds, uniformly distributed in populations, but rather that mutations are more common in stressed individuals and populations. Because mutation is the raw material of evolution, these results have a profound impact on broad aspects of evolution and biology.
DOI: 10.6084/m9.figshare.95925
title: Tabular overview of genomes

description: An overview of the 347 genomes of Escherichia coli used in this study. This text file contains the BIOID code for each genome, the corresponding file name, short name (usually the strain) and whether the genome project is completed or not.
DOI: 10.6084/m9.figshare.95927
title: A pan-tree for 347 E. <i>coli</i> genomes

description: The SVG-file is an unweighted pan-tree for the 347 genomes of E. coli in this study.
DOI: 10.6084/m9.figshare.95923
title: Gaussian Job Archive for C10H8N4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95922
title: Gaussian Job Archive for C10H8N4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95925.v1
title: Tabular overview of genomes

description: An overview of the 347 genomes of Escherichia coli used in this study. This text file contains the BIOID code for each genome, the corresponding file name, short name (usually the strain) and whether the genome project is completed or not.
DOI: 10.6084/m9.figshare.95922.v1
title: Gaussian Job Archive for C10H8N4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95923.v1
title: Gaussian Job Archive for C10H8N4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95916
title: Bright line detection in COSMO-SkyMed SAR images of urban areas

description: At the JURSE 2011 conference, I presented some work on feature extraction in SAR amplitude images of urban areas. This fileset contains the preprint of the paper, and the slides I presented at the conference. Please cite: P.T.B. Brett and R. Guida. <em>Bright line detection in COSMO-SkyMed SAR images of urban areas</em>. In Joint Urban Remote Sensing Event 2011 (JURSE 2011), pages 253-256, 11-13 April 2011. Published version of the paper: doi:10.1109/JURSE.2011.5764767.
DOI: 10.6084/m9.figshare.95918
title: Gaussian Job Archive for C8H18(1+,2)

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95915
title: Geometry-based SAR curvilinear feature selection for damage detection

description: I was invited to present some recent research at the EUSAR 2012 conference in April 2012. This fileset contains a preprint of the paper, errata to the paper, and the slides for my presentation at the conference. Please cite: P.T.B. Brett and R. Guida. <em>Geometry-based SAR curvilinear feature selection for damage detection.</em> In 9th European Conference on Synthetic Aperture Radar - Invited Papers (EUSAR 2012 - Invited Papers), pages 62-65, 23-26 April 2011. Unfortunately VDE have not provided a DOI for the published proceedings.
DOI: 10.6084/m9.figshare.95915.v1
title: Geometry-based SAR curvilinear feature selection for damage detection

description: I was invited to present some recent research at the EUSAR 2012 conference in April 2012. This fileset contains a preprint of the paper, errata to the paper, and the slides for my presentation at the conference. Please cite: P.T.B. Brett and R. Guida. <em>Geometry-based SAR curvilinear feature selection for damage detection.</em> In 9th European Conference on Synthetic Aperture Radar - Invited Papers (EUSAR 2012 - Invited Papers), pages 62-65, 23-26 April 2011. Unfortunately VDE have not provided a DOI for the published proceedings.
DOI: 10.6084/m9.figshare.95918.v1
title: Gaussian Job Archive for C8H18(1+,2)

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95916.v1
title: Bright line detection in COSMO-SkyMed SAR images of urban areas

description: At the JURSE 2011 conference, I presented some work on feature extraction in SAR amplitude images of urban areas. This fileset contains the preprint of the paper, and the slides I presented at the conference. Please cite: P.T.B. Brett and R. Guida. <em>Bright line detection in COSMO-SkyMed SAR images of urban areas</em>. In Joint Urban Remote Sensing Event 2011 (JURSE 2011), pages 253-256, 11-13 April 2011. Published version of the paper: doi:10.1109/JURSE.2011.5764767.
DOI: 10.6084/m9.figshare.95921.v1
title: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living

description: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living
DOI: 10.6084/m9.figshare.95921.v2
title: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living

description: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living
DOI: 10.6084/m9.figshare.95874
title: Robson Creek #TERN_Aus #Auscover Field Campaign GPS Track-log 20120909

description: 53 Hours and 460 km of Tracklog captured by the Author during a one week #Auscover #TERN_Aus fieldtrip in Robson Creek, North Queensland. Captures the daily commute to the sites, and the locations of the spectral, structure and laser scanning surveys in this North Queensland Rainforest Plot. All the field data collected duting this campain will be available at the URL below when processed.
DOI: 10.6084/m9.figshare.95890
title: Dataset for Erratum of Finet et al. 2011

description: This fileset includes several datasets accompanying the erratum referring to Finet et al. 2011. 1) <strong>N-makers-filtered.tre.gz</strong> contains the bunch of trees independently obtained for each of the 77 ribosomal protein (RP) alignment using RAxML and a LG+gamma model (editable with figtree*). 2)<strong> indep_markers.tgz</strong> includes the correspondent 77 RP alignments employed to reconstruct corresponding tree in phylip format. 3)<strong> N0503+C.phy.gz</strong> is the concatenated alignement of 77 RPs for 77 taxa employed for phylogenetic reconstruction. 4) <strong>N0503+C.raxml_lg+gam.tre.gz </strong>is the ML tree reconstructed for this dataset using RAxML with LG+gam model 5) <strong>N0503+C.cat+gam.tre.gz</strong> is the bayesian tree reconstructed for this dataset using Phylobayes with CAT+gam model. * all trees or tree sets have been formatted to be viewed with figtree (downloadable with http://tree.bio.ed.ac.uk/software/figtree/)
DOI: 10.6084/m9.figshare.95874.v1
title: Robson Creek #TERN_Aus #Auscover Field Campaign GPS Track-log 20120909

description: 53 Hours and 460 km of Tracklog captured by the Author during a one week #Auscover #TERN_Aus fieldtrip in Robson Creek, North Queensland. Captures the daily commute to the sites, and the locations of the spectral, structure and laser scanning surveys in this North Queensland Rainforest Plot. All the field data collected duting this campain will be available at the URL below when processed.
DOI: 10.6084/m9.figshare.95890.v1
title: Dataset for Erratum of Finet et al. 2011

description: This fileset includes several datasets accompanying the erratum referring to Finet et al. 2011. 1) <strong>N-makers-filtered.tre.gz</strong> contains the bunch of trees independently obtained for each of the 77 ribosomal protein (RP) alignment using RAxML and a LG+gamma model (editable with figtree*). 2)<strong> indep_markers.tgz</strong> includes the correspondent 77 RP alignments employed to reconstruct corresponding tree in phylip format. 3)<strong> N0503+C.phy.gz</strong> is the concatenated alignement of 77 RPs for 77 taxa employed for phylogenetic reconstruction. 4) <strong>N0503+C.raxml_lg+gam.tre.gz </strong>is the ML tree reconstructed for this dataset using RAxML with LG+gam model 5) <strong>N0503+C.cat+gam.tre.gz</strong> is the bayesian tree reconstructed for this dataset using Phylobayes with CAT+gam model. * all trees or tree sets have been formatted to be viewed with figtree (downloadable with http://tree.bio.ed.ac.uk/software/figtree/)
DOI: 10.6084/m9.figshare.95855
title: Gaussian Job Archive for C10H8N4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95903.v1
title: A SAR Image-Based Tool for Post-Earthquake Preparedness and Resilience

description: Preprint of: R. Guida and P.T.B. Brett. <em>A SAR image-based tool for prompt and effective earthquake response.</em> In Joint Urban Remote Sensing Event 2011 (JURSE 2011), pages 213-216, 11-13 April 2011. Published version: doi:10.1109/JURSE.2011.5764758.
DOI: 10.6084/m9.figshare.95921.v3
title: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living

description: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living
DOI: 10.6084/m9.figshare.95855.v1
title: Gaussian Job Archive for C10H8N4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95921.v4
title: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living

description: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living
DOI: 10.6084/m9.figshare.95873.v1
title: Tobacco control policy in France: from war to compromise and collaboration

description: Tobacco control policy in France: from war to compromise and collaboration <br><em>Alain Braillon, Anne Sophie Mereau, Gérard Dubois </em> BACKGROUND: Absence of an effective tobacco control policy costs lives and tobacco prevention is policy-sensitive. We describe the historical record of tobacco control in France. <br>METHODS: Public policies and main decisions (laws, regulations, health plans) for tobacco control were considered from 1950 to 2010. Data for cigarette sales and relative price of cigarettes were obtained from official databases. Sales are expressed in number of cigarettes. The relative price of cigarettes is the nominal price divided by the Consumer Price Index. <br>RESULTS: The first step Veil Law (1976) blunted the steady increase in cigarette sales observed since World War II. <br>The second period began with the Evin Law (1991). This law banned tobacco advertising and withdrew tobacco from the Consumer Price Index allowing for marked and repeated increases in taxes. Sales decreased over the next 6 years, from 97.1 billion to 83.0 billion in 1997 but then remained steady for 5 years (83.5 billion in 2001). <br>The first Cancer Plan (2003) imposed three tax increases in a year (39% increase in price). Cigarette sales decreased to 54.9 billion in 2004. <br>This period ended in 2004 when a moratorium on tobacco taxes was announced. The policies which have been implemented since President Sarkozy was elected in 2007 were flawed and protected the interests of the tobacco industry: prevalence of smoking is now increasing, mainly among the younger generation. <br>Since 1991, the cigarette market has nearly halved but the decline has been a stop-and-go erratic process. The two 5-year periods (1997-2002 and 2005 -2010) during which consumption leveled off seem to demonstrate that government-driven health policies could have been influenced by commercial interests. <br>CONCLUSION: Tobacco control efforts, especially tobacco tax increases, need to be sustained and shielded from the influence of the tobacco industry. <br><br>KEYWORDS: tobacco, public policy, Framework Convention on Tobacco Control, France <br><br>
DOI: 10.6084/m9.figshare.95844
title: MiscAbundanceDB_citations

description: References used for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95921.v5
title: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living

description: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living
DOI: 10.6084/m9.figshare.95843
title: MiscAbundanceDB_main

description: Main table with species identity and abundance for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95921.v6
title: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living

description: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living
DOI: 10.6084/m9.figshare.95842
title: MiscAbundanceDB_sites

description: Sites information for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95921.v7
title: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living

description: But, Who Said That: Low-Tech Theory in an Age of Hi-Tech Living
DOI: 10.6084/m9.figshare.95841
title: MiscAbundanceDB_metadata

description: Metadata for MiscAbundanceDB. Datafiles include: MiscAbundanceDB_citations MiscAbundanceDB_main MiscAbundanceDB_sites
DOI: 10.6084/m9.figshare.95843.v1
title: MiscAbundanceDB

description: Abundance data for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95844.v1
title: MiscAbundanceDB

description: Citation table for MiscAbundanceDB
DOI: 10.6084/m9.figshare.95843.v2
title: MiscAbundanceDB_main

description: Main table with species identity and abundance for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95844.v2
title: MiscAbundanceDB_main

description: Citation table for MiscAbundanceDB
DOI: 10.6084/m9.figshare.95842.v1
title: MiscAbundanceDB

description: Sites table for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95843.v4
title: MiscAbundanceDB_main

description: Main table with species identity and abundance for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95843.v3
title: MiscAbundanceDB_main

description: Main table with species identity and abundance for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95844.v3
title: MiscAbundanceDB_citations

description: Metadata for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95841.v1
title: MiscAbundanceDB

description: Metadata for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95844.v4
title: MiscAbundanceDB_citations

description: References used for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95839
title: R code for the function fs_create

description: An R implementation of the figshare API function to create a new article. Look Ma, I can share nice code on figshare! This function is part of the rfigshare package by the rOpenSci project.
DOI: 10.6084/m9.figshare.95841.v3
title: MiscAbundanceDB_metadata

description: Metadata for MiscAbundanceDB. Datafiles include: MiscAbundanceDB_citations MiscAbundanceDB_main MiscAbundanceDB_sites
DOI: 10.6084/m9.figshare.95842.v2
title: MiscAbundanceDB_sites

description: Sites information for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95839.v1
title: R code for the function fs_create

description: An R implementation of the figshare API function to create a new article. Look Ma, I can share nice code on figshare! This function is part of the rfigshare package by the rOpenSci project.
DOI: 10.6084/m9.figshare.95841.v2
title: MiscAbundanceDB_metadata

description: Metadata for MiscAbundanceDB. Datafiles include: MiscAbundanceDB_citations MiscAbundanceDB_main MiscAbundanceDB_sites
DOI: 10.6084/m9.figshare.95842.v4
title: MiscAbundanceDB_sites

description: Sites information for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95844.v6
title: MiscAbundanceDB_citations

description: References used for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95842.v3
title: MiscAbundanceDB_sites

description: Sites information for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95844.v5
title: MiscAbundanceDB_citations

description: References used for MiscAbundanceDB.
DOI: 10.6084/m9.figshare.95834.v1
title: Size-temperature responses of organisms and metabolic response to lcimate change

description: The poster I presented at the Gordon Research Conference "A Metabolic Basis of Ecology" in 2012. The work was in prep when presented and explores whether body size responses to increasing temperature can offset temperature effects on metabolic rate.
DOI: 10.6084/m9.figshare.95819
title: Gaussian Job Archive for CH3I2Na

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95821
title: Informal Fauna Survey - Sturt National Park 2009

description: An informal survey of mammals and reptiles trapped or observed in September/October 2009 at Sturt National Park in far western NSW. This period was well into an extended drought. Trapping was primarily using existing National Parks Wildlife Service pitfall traps, although Elliot traps were used - albeit unsuccessfully. A total of 16 species caught and measured, including 12 reptiles and 4 mammals. All animals released after measuring and there were no mortalities as a result of ther trapping.
DOI: 10.6084/m9.figshare.95818
title: Gaussian Job Archive for CH3Cl2Na

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95819.v1
title: Gaussian Job Archive for CH3I2Na

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95821.v1
title: Informal Fauna Survey - Sturt National Park 2009

description: An informal survey of mammals and reptiles trapped or observed in September/October 2009 at Sturt National Park in far western NSW. This period was well into an extended drought. Trapping was primarily using existing National Parks Wildlife Service pitfall traps, although Elliot traps were used - albeit unsuccessfully. A total of 16 species caught and measured, including 12 reptiles and 4 mammals. All animals released after measuring and there were no mortalities as a result of ther trapping.
DOI: 10.6084/m9.figshare.95816
title: Gaussian Job Archive for Br2H3N

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95817
title: Gaussian Job Archive for CH3F2Na

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.95806
title: AZ_MRC compounds with PubChem IDs and patent mappings

description: See updates below introduction I have performed the same exercise as described for the NCATS 56 small molecules, Namely to 1) map the code name to a structure, 2) assign these to a PubChem CID and 3) search SureChemOpen for matches to early patent filings (details are given in blog link below) <br> <br>Updates: October: InChIKey for AZD1656 has been added to this descrition page as a Google indexing an retrieval test FJEJHJINOKKDCW-INIZCTEOSA-N Sept 2012) InChIKey added as a new column in the Excell file for Google indexing and are now retrievable by searching the key in Google<br> <br> Update Jan 2014: Now at 58 structures from 78 codes <br> <br> <br> <br>
DOI: 10.6084/m9.figshare.95816.v1
title: Gaussian Job Archive for Br2H3N

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.