cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15083573
title: Recurrent evolution of selfishness from a tRNA-synthetase essential for life

description: This dataset contain the following files:



Funannotate-based predicted ORF databases of two wild C. tropicalis isolates - EG6180 and NIC203 (files EG6180.proteins.fa and NIC203.proteins.fa). EG6180 protein database supplemented with KSS-1::FLAG and KSS-2::FLAG sequences was used for KSS-1::FLAG and KSS-2::FLAG pull-down annotation.

ORFs annotations of two wild C. tropicalis isolates - EG6180 and NIC203 (files EG6180_EG-ORF.gff3 and NIC203_NIC-ORF.gff3). We manually fixed exon-intron borders for pzl-1 and kss-3 genes in both annotation files based on mRNA-seq reads mapping and rtPCR. The NIC203 and EG6180 soft-masked genome assemblies and RNA-seq reads were input to funannotate, a pipeline for genome annotation (https://funannotate.readthedocs.io/en/latest/). We used the following recommended modifications for annotating a nematode genome: we allowed an intron size of up to 20,000bp (based on the largest introns in C. elegans), changed Busco database to nematoda, and specified the -species “other” flag where recommended in the online documentation of the pipeline.

Mass-spectrometry identification of KSS-1::FLAG and KSS-2::FLAG pull-down interactomes (files KSS-1-pull-down.xlsm and KSS-2-pull-down.xlsm).

Mass-spectrometry characterisation of purified KLMT-1 protein sample (file KLMT-1-mass-spectrometry.xlsm)

Mass-spectrometry characterisation of purified KLMT-1-KSS-1::Strep-SKR-1 protein complex (file KLMT-1-KSS-1CS-SKR-1-mass-spectrometry.xlsm)
DOI: 10.15468/dl.q2uya7
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eremias kokshaaliensis Eremchenko & Panfilov, 1999"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005347-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jrn4xz
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Pleurobrachia globosa Moser, 1903"
 ]
}

 The dataset includes 20 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005346-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/kfxmyzm5x9.1
title: 10.1016/j.phrs.2024.107491

description: raw data of " Nanoparticles encapsulating phosphatidylinositol derivatives promote neuroprotection and functional improvement in preclinical models of ALS via a long-lasting activation of TRPML1 lysosomal channel" doi 10.1016/j.phrs.2024.107491
DOI: 10.17632/k3fsfzr7j8.1
title: Prkra dimer senses double-stranded RNAs to dictate global translation efficiency

description: Double-stranded RNAs (dsRNAs), known as conserved pathogen-associated molecular patterns, activate the integrated stress response via interferon-induced protein kinase R (PKR), leading to global translation inhibition. However, the interferon system is inactive in pluripotent cells, leaving the mechanisms of dsRNA sensing and translational control unclear. In this study, we utilized early zebrafish embryos as a model of pluripotent cells and discovered a PKR-independent blockage of translation initiation by dsRNA stimulation. Prkra dimer was identified as the genuine dsRNA sensor. Upon dsRNA binding, the dimerized dsRNA binding domain 3 of Prkra becomes activated to sequester the eIF2 complexes from the translation machinery, inhibiting global protein synthesis. This distinctive embryonic stress response restricts RNA virus replication in zebrafish embryos, is conserved in mouse embryonic stem cells, and compensates PKR function in differentiated cells. Therefore, the Prkra-mediated dsRNA sensing and translation control may serve as a common strategy for cells to adapt environmental stresses.
DOI: 10.17632/k3fsfzr7j8.2
title: Prkra dimer senses double-stranded RNAs to dictate global translation efficiency

description: Double-stranded RNAs (dsRNAs), known as conserved pathogen-associated molecular patterns, activate the integrated stress response via interferon-induced protein kinase R (PKR), leading to global translation inhibition. However, the interferon system is inactive in pluripotent cells, leaving the mechanisms of dsRNA sensing and translational control unclear. In this study, we utilized early zebrafish embryos as a model of pluripotent cells and discovered a PKR-independent blockage of translation initiation by dsRNA stimulation. Prkra dimer was identified as the genuine dsRNA sensor. Upon dsRNA binding, the dimerized dsRNA binding domain 3 of Prkra becomes activated to sequester the eIF2 complexes from the translation machinery, inhibiting global protein synthesis. This distinctive embryonic stress response restricts RNA virus replication in zebrafish embryos, is conserved in mouse embryonic stem cells, and compensates PKR function in differentiated cells. Therefore, the Prkra-mediated dsRNA sensing and translation control may serve as a common strategy for cells to adapt environmental stresses.
DOI: 10.15468/dl.wewnk7
title: Occurrence Download

description: A dataset containing 431 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Carex durieui Steud. ex Kunze"
 ]
}

 The dataset includes 431 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005349-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.11583/dtu.28652015
title: Data for: Correlative X-ray Imaging to Reveal the Dissolution of Nanoparticles and Nutrient Transport in Plant Foliar Fertilization

description: Using three complementary X-ray methods (Scanning SAXS, µCT and XRF) we probe the dissolution, aggregation and translocation state of foliar applied fertilizers dosed to young barley leaves. Interpreting the time-dependent changes in each of the three signals we show how particles dissolve and some of the fertilizer material translocate to other plant parts while others are left behind.This deposit contains all relevant data used in this study.<br><br>
DOI: 10.17632/w7bvnw276b
title: WVS Cross-National Wave 7 stata v5.0 -- Muslims Only

description: This dataset is a filtered and processed subset derived from the World Values Survey Wave 7 (2017–2022), version 5.0, available at www.worldvaluessurvey.org. It includes responses exclusively from self-identified Muslim participants, based on the condition Q289 == 5. All variable labels and coding schemes follow the original WVS documentation.

Please cite the original source as follows:
Haerpfer, C., Inglehart, R., Moreno, A., Welzel, C., Kizilova, K., Diez-Medrano, J., Lagos, M., Norris, P., Ponarin, E., & Puranen, B. (2022). World Values Survey Wave 7 (2017–2022) Cross-National Data-Set (Version 5.0). World Values Survey Association. https://doi.org/10.14281/18241.18
DOI: 10.17632/w7bvnw276b.1
title: WVS Cross-National Wave 7 stata v5.0 -- Muslims Only

description: This dataset is a filtered and processed subset derived from the World Values Survey Wave 7 (2017–2022), version 5.0, available at www.worldvaluessurvey.org. It includes responses exclusively from self-identified Muslim participants, based on the condition Q289 == 5. All variable labels and coding schemes follow the original WVS documentation.

Please cite the original source as follows:
Haerpfer, C., Inglehart, R., Moreno, A., Welzel, C., Kizilova, K., Diez-Medrano, J., Lagos, M., Norris, P., Ponarin, E., & Puranen, B. (2022). World Values Survey Wave 7 (2017–2022) Cross-National Data-Set (Version 5.0). World Values Survey Association. https://doi.org/10.14281/18241.18
DOI: 10.17632/5s4pww3kbr
title: Appendices - Quality of life among patients with vitiligo in south western Uganda.

description: This data set was used in the data collection of a study titled 'PREVALENCE, CLINICAL CHARACTERISTICS AND QUALITY OF LIFE OF PATIENTS WITH VITILIGO ATTENDING THE SKIN CLINIC AT MBARARA REGIONAL REFERRAL HOSPITAL' . A paper on Quality of life among patients with vitiligo in south western Uganda has been prepared for publication.
DOI: 10.17632/5s4pww3kbr.1
title: Appendices - Quality of life among patients with vitiligo in south western Uganda.

description: This data set was used in the data collection of a study titled 'PREVALENCE, CLINICAL CHARACTERISTICS AND QUALITY OF LIFE OF PATIENTS WITH VITILIGO ATTENDING THE SKIN CLINIC AT MBARARA REGIONAL REFERRAL HOSPITAL' . A paper on Quality of life among patients with vitiligo in south western Uganda has been prepared for publication.
DOI: 10.17632/d9dntsd3h7.1
title: Ceramic Fused Filament Fabrication (CF3) of zirconia implants by using flexible, partially water-soluble binder systems - data set

description: This dataset contains all data generated in connection with the related journal article. This includes the rheological properties of the developed feedstocks as well as the post-processing data.
DOI: 10.17632/fx6jjwtrvy.1
title: Soil Biogeochemistry Pacific Northwest

description: This dataset includes soil, plant and nitrogen fixation rate data for the grassland plots studied along the Pacific Northwest gradient. In this study, we test the hypothesis that the impact of climatic stress (i.e. experimental warming and drought) on PNW grasslands are mediated by interactions between plant functional diversity and soil biogeochemical processes, including symbiotic nitrogen (N) fixation in legumes and free-living asymbiotic nitrogen fixation (ANF) by soil microorganisms. To test this hypothesis, we measured the response of plants and soils to three years of warming (+2.5ºC) and drought (-40% precipitation) in field experiments, replicated at three different sites across a ~520-km latitudinal gradient.
DOI: 10.17632/fx6jjwtrvy.2
title: Soil Biogeochemistry Pacific Northwest

description: This dataset includes data files with soil, plant and nitrogen fixation rate data for the grassland plots studied along the Pacific Northwest gradient. In this study, we test the hypothesis that the impact of climatic stress (i.e. experimental warming and drought) on PNW grasslands are mediated by interactions between plant functional diversity and soil biogeochemical processes, including symbiotic nitrogen (N) fixation in legumes and free-living asymbiotic nitrogen fixation (ANF) by soil microorganisms. To test this hypothesis, we measured the response of plants and soils to three years of warming (+2.5ºC) and drought (-40% precipitation) in field experiments, replicated at three different sites across a ~520-km latitudinal gradient.
DOI: 10.15468/dl.t5zj8p
title: Occurrence Download

description: A dataset containing 25348 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "GadmGid is NLD.4.3_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Arthropoda",
 "Year is 2024"
 ]
}

 The dataset includes 25348 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005352-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/8ddn9sdjys.1
title: Molecular Classification for Phyllodes Tumors Improves Diagnosis and Guides Treatment Decisions

description: This project aims to improve the understanding and management of phyllodes tumors of the breast, which are aggressive and recurrent fibroepithelial neoplasms distinct from breast cancer. Currently, surgical intervention is the primary treatment due to the lack of effective medical therapies, and histopathological diagnosis fails to accurately predict tumor behavior and clinical outcomes. To address this, we established a large cohort of phyllodes tumors and utilized multi-omics data to identify molecular subtypes, aiming to develop precise classifications for prognosis and targeted treatment strategies. Additionally, we created a gene signature classifier and IHC-based markers to define subtypes and predict outcomes. This research seeks to pave the way for precision medicine in phyllodes tumor management, enabling personalized therapeutic approaches for patients.
DOI: 10.15468/dl.6fr72k
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eremias kopetdaghica Szczerbak, 1972"
 ]
}

 The dataset includes 35 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005355-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6r68d2
title: Occurrence Download

description: A dataset containing 957 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ambystoma mexicanum (Shaw & Nodder, 1798)"
 ]
}

 The dataset includes 957 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005356-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ucyjn5
title: Occurrence Download

description: A dataset containing 283 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diphyes chamissonis Huxley, 1859"
 ]
}

 The dataset includes 283 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005357-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15139/s3/mmhph7
title: Monmouth University National Poll, Number 225

description: This survey was conducted using a national sample and addresses the 2020 general election, Chinese and Russian interference in the presidential election, maintaining law and order in the country, respect for military troops, race relations, integration of suburban communities, protests for incidents involving police and the deaths of Black civilians, and the coronavirus outbreak.
DOI: 10.15468/dl.8sc4jb
title: Occurrence Download

description: A dataset containing 511 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "GadmGid is AUS.9_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Pterostylis pratensis D.L.Jones",
 "Year 1970-2025"
 ]
}

 The dataset includes 511 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005359-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w8r5jf
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eremias lalezharica Moravec, 1994"
 ]
}

 The dataset includes 29 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005360-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60656/b2ba350703864031
title: Custom collection of classification data from Limassol between 19 Oct 2016 and 25 Mar 2018
DOI: 10.60656/9379219b5575405b
title: Custom collection of model data from Limassol between 19 Oct 2016 and 25 Mar 2018
DOI: 10.15468/dl.w9gchj
title: Occurrence Download

description: A dataset containing 373 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Plant occurrences on small islands in the Raja Ampat Archipelago, Indonesia"
 ]
}

 The dataset includes 373 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005362-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rma9xd
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eremias montana Rastegar-Pouyani & Rastegar-Pouyani, 2001"
 ]
}

 The dataset includes 12 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005363-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.24m47g
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AAC6880"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005364-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z4jbg8
title: Occurrence Download

description: A dataset listing the 1208 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Apidae, Megachilidae, Colletidae, Halictidae, Mellitidae, Andrenidae)"
 ]
}

 The dataset's 1208 records were derived from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005353-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qusjev
title: Occurrence Download

description: A dataset containing 203680 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coronella austriaca Laurenti, 1768, Barbastella barbastellus (Schreber, 1774), Saxicola rubetra (Linnaeus, 1758), Anas crecca Linnaeus, 1758, Lanius excubitor Linnaeus, 1758, Plecotus auritus (Linnaeus, 1758), Caprimulgus europaeus Linnaeus, 1758, Crex crex (Linnaeus, 1758), Lyrurus tetrix (Linnaeus, 1758), Lucanus cervus (Linnaeus, 1758), Gallinago gallinago (Linnaeus, 1758), Tetrao tetrix Linnaeus, 1758)",
 "Year is not null",
 "Year is one of (2020, 2021, 2022, 2023, 2024)",
 "HasCoordinate is TRUE",
 "DecimalLatitude is greater than or equal to 47.53364139636112",
 "DecimalLatitude is less than or equal to 55.05737499791894",
 "DecimalLongitude is greater than or equal to 5.865999",
 "DecimalLongitude is less than or equal to 15.037743",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 203680 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005343-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tcefq8
title: Occurrence Download

description: A dataset containing 8546 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hydrurga leptonyx (de Blainville, 1820)"
 ]
}

 The dataset includes 8546 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005365-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15087654
title: Hyperspectral Image acquired on LRI curing process

description: This dataset was generated within the framework of the EU-funded FLASH-COMP project, which aims to develop a human-oriented solution for the early identification of defective composite parts in manufacturing. The overarching goal is to enhance composite manufacturing processes by enabling zero-defect production and reducing material waste generation.

A key enabling technology in the project is Hyperspectral Imaging (HSI). This dataset contains hyperspectral images acquired during the production of two composite parts manufactured using the Liquid Resin Infusion (LRI) process. The data is intended to support research and development on process monitoring and quality assurance in advanced manufacturing.





Data Structure:





sampleA_hsi_reflectance.npy:Contains the raw reflectance hypercubes of all acquisitions (N) during the curing phase of Sample A, saved in .npy format.




sampleA_auxiliary_data.zip:Contains:





Reference cure degree values: One vector of N values for each sensor used, saved in .npy format.




Sensor positions within the hyperspectral image: Defined using Regions of Interest (ROI) in [x1, y1, x2, y2] format. Each ROI is stored in a .npy file as an [N, 4] matrix, where N is the number of acquisitions.






sampleB_hsi_reflectance.zip:Contains the raw reflectance hypercubes of all acquisitions during the curing phase of Sample B, saved in .npy format.





Note: This dataset is currently under embargo and will be made publicly available upon acceptance of the associated peer-reviewed article.
DOI: 10.15468/dl.u47kyk
title: Occurrence Download

description: A dataset containing 108692 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Carex demissa Hornem."
 ]
}

 The dataset includes 108692 records from 822 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005348-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.benw3w
title: Occurrence Download

description: A dataset containing 16891 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "GadmGid is NLD.11.33_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Arthropoda",
 "Year is 2022"
 ]
}

 The dataset includes 16891 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005366-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9x2ss3
title: Occurrence Download

description: A dataset containing 44251 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pharomachrus mocinno La Llave, 1832"
 ]
}

 The dataset includes 44251 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005369-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ntwd7f
title: Occurrence Download

description: A dataset containing 675207 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Danaus plexippus (Linnaeus, 1758)"
 ]
}

 The dataset includes 675207 records from 362 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005351-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ha0ngo
title: Occurrence Download

description: A dataset containing 48269 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Artemisia campestris L.",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 48269 records from 242 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035837-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.