cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3535/1z9-390-1sh
title: Annelida

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3874441_d1
title: Additional file 1: Table S1. of IGF1R activation and the in vitro antiproliferative efficacy of IGF1R inhibitor are inversely correlated with IGFBP5 expression in bladder cancer

description: mRNA expression levels of the components of IGF pathway in the FBLAD-Exon set of 125 bladder tumors. Data were obtained from Human Genome Exon 1.0ST arrays. (XLS 27 kb)
DOI: 10.3535/h7d-vqv-vc8
title: Heteromastus filiformis (Claparède, 1864)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2am-l19-b7z
title: Nephtys Cuvier, 1817

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5ps-m8m-vx9
title: Halocercus Baylis & Daubney, 1925

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h0n-rkl-682
title: Nephtys Cuvier, 1817

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rqp-6kt-5mh
title: Nephtys Cuvier, 1817

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0q8-snc-zjr
title: Diplotriaena

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jhk-qd8-njf
title: Tubiluchus van der Land, 1968

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/72t-0a0-8vc
title: Hemiurus communis Odhner, 1905

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/835-akl-krb
title: Nephtys Cuvier, 1817

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.fqaexr
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cubiceps gracilis (Lowe, 1843)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 28 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040032-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/6s0-k5h-9bw
title: Lumbricillus lineatus (Müller, 1774)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z5j-3d7-zg4
title: Magelona papillicornis F. Müller, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/el9-ed7-c8s
title: Polyschista curacaoensis Stiasny-Wijnhoff, 1925

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vxt-eh7-69y
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/emp-6vz-ln9
title: Diphyllobothrium stemmacephalum Cobbold, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k2e-ndd-ze3
title: Amidostomum acutum (Lundahl, 1848)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/erg-tbc-y86
title: Erpobdella

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/te0-cak-yqw
title: Erpobdella

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8zt-xp3-rtj
title: Harmothoe impar (Johnston, 1839)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y84-8yb-fqm
title: Scoloplos armiger (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ekg-lfd-jfy
title: Spio filicornis (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/32t-pt3-tg0
title: Scoloplos armiger (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/nsr-tec-whl
title: Spio filicornis (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ryz-l7s-yfe
title: Gyrocotyle urna (Grube & Wagener in Wagener, 1852) Wagener, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xaz-pg5-90t
title: Gyrocotyle urna (Grube & Wagener in Wagener, 1852) Wagener, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/722-6vp-v0b
title: Caenoplana coerulea Moseley, 1877

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/brj-8g9-0q8
title: Trichostrongylus vitrinus Looss, 1905

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q5w-g47-asf
title: Theromyzon

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/h6q-aq2-x5x
title: Eunoe nodosa (M. Sars, 1861)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l8y-yl9-bc5
title: Strigea Abildgaard, 1790

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hfm-9ys-7p1
title: Hydroides exaltata (Marenzeller, 1884)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/962-wfr-cms
title: Tylenchus Bastian, 1865

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ylm-8kv-902
title: Lamellibrachia luymesi van der Land & Nørrevang, 1975

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3l8-0fn-6lm
title: Poecilobdella

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k11-7bf-axk
title: Fasciola jacksoni Cobbold, 1869

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/31z-k3v-t3w
title: Poecilobdella

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3ne-35w-wc6
title: Contracaecum (Contracaecum) (Railliet & Henry, 1912) Mosgovoy, 1951

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ng9-7k4-3yn
title: Poecilobdella

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/78r-ncp-4xa
title: Spiculopteragia boehmi (Gebauer, 1932) Orloff, 1933

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9w5-rmm-9gx
title: Schistosoma japonicum Katsurada, 1904

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3875800_d1
title: Additional file 1: of Evidence-based gene models for structural and functional annotations of the oil palm genome

description: Includes information of oil palm RNA-seq data, annotation of IG, R genes and FAB genes, GO and GC3. (XLSX 8028Â kb)
DOI: 10.3535/gnt-ehg-dv9
title: Allonais paraguayensis (Michaelsen, 1905)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n11-gs4-4ra
title: Crenosoma vulpis (Dujardin, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/86p-wj1-fn6
title: Diclidophora Krøyer, 1838

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ztw-d9r-f3v
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/6k8-8g0-wtj
title: Lepidonotus cristatus (Grube, 1876)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/k6x-n5w-4x6
title: Diplostomum spathaceum (Rudolphi, 1819) Olsson, 1876

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.29ggx3
title: Occurrence Download

description: A dataset containing 120 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Eurycea sosorum Chippindale, Price & Hillis, 1993)"
 ]
}

 The dataset includes 120 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040033-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/ry9-ksc-f5d
title: Pristina (Pristina) Ehrenberg, 1831

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2hk-kfw-kmy
title: Diplostomum spathaceum (Rudolphi, 1819) Olsson, 1876

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j7f-z2y-d6p
title: Scoloplos armiger (Müller, 1776)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/30d-86g-fkr
title: Magelona papillicornis F. Müller, 1858

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/11p-lrc-k66
title: Harmothoe impar (Johnston, 1839)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3b7-mq9-f2f
title: Harmothoe impar (Johnston, 1839)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/41g-l50-pqd
title: Raillietina Fuhrmann, 1920

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7kx-qjg-xgv
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8n8-vea-946
title: Harmothoe impar (Johnston, 1839)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8sr-keh-53b
title: Phagocata vivida (Ijima & Kaburaki, 1916)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r3d-ad5-wpg
title: Moniliformis Travassos, 1915

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vmv-stw-wzy
title: Clymenella torquata (Leidy, 1855)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g5n-heq-s3r
title: Lepidonotus semitectus (Stimpson, 1855)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yl3-tvr-vf2
title: Polydora ciliata (Johnston, 1838)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/812-pf1-z4g
title: Polydora ciliata (Johnston, 1838)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wn4-n5g-g8f
title: Derogenes varicus (Müller, 1784) Looss, 1901

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4qk-1f0-726
title: Annelida

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tsd-244-9l3
title: Pelogenia zeylanica (Willey, 1905)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3877066_d6.v1
title: Additional file 15: of Comprehensive survey and evolutionary analysis of genome-wide miRNA genes from ten diploid Oryza species

description: Multiple sequence alignment of all the sequencedmiR1861-clusters individually shows the significant conservation in the cluster sequences among the Oryza species. The presence of distinct nucleotide substitutions and indels were also evident with the Cluster-VII being the most diverged. (TXT 20Â kb)
DOI: 10.3535/c08-6jj-je0
title: Eulalia viridis (Linnaeus, 1767)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bem-91q-39g
title: Dero pectinata Aiyer, 1929

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qy9-jvy-bj5
title: Nephtys cirrosa Ehlers, 1868

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.5281/zenodo.10847374
title: Data from Large-Aperture Scintillometer (LAS) path measurements between Berlin – Charlottenburg (BECHAR) and Berlin – Mitte (BEMITT) from 2021-09-02 to 2022-07-21 [RAW]

description: Original data files from LAS measurements.
description: TECHNICAL INFO

No data quality control has been carried out. No gap-filling has been applied. Detailed information about the sites and deployments can be found in the urbisphere-Berlin campaign technical documentation.

Files are organised in sub-directories per year and day of year (DOY).

COPYRIGHT NOTICE

Copyright Jörn Birkmann, Andreas Christen, Nektarios Chrysoulakis, and Sue Grimmond. Some rights reserved.

CREATOR NOTICE

This work is owned by the Principal Investigators (PIs) of the Urbisphere project. 

ATTRIBUTION NOTICE

The [creation and] curation of this work has been funded by the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation programme (grant agreement No 855005). 

DISCLAIMER NOTICE

The use of the work is at the user's own risk. The authors, the involved institutions, and/or the European Research Council accept no liability for material or non-material damage arising from the use or non-use or from the use of incorrect or incomplete information in this work. The authors, the involved institutions, and/or the European Research Council are not responsible for any use that may be made of the information in this work. The legal provisions remain unaffected.

MATERIAL NOTICE

The notices cover data in databases, text and images contained in the work.

MATERIAL URI

Urbisphere project
DOI: 10.6084/m9.figshare.c.3877066_d6
title: Additional file 15: of Comprehensive survey and evolutionary analysis of genome-wide miRNA genes from ten diploid Oryza species

description: Multiple sequence alignment of all the sequencedmiR1861-clusters individually shows the significant conservation in the cluster sequences among the Oryza species. The presence of distinct nucleotide substitutions and indels were also evident with the Cluster-VII being the most diverged. (TXT 20Â kb)
DOI: 10.3535/bfb-a6m-q3m
title: Dero pectinata Aiyer, 1929

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t87-q9c-44g
title: Heteromastus filiformis (Claparède, 1864)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fw7-5aa-rqr
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/twy-65b-cl0
title: Obama nungara Carbayo, Alvarez-Presas, Jones & Riutort, 2016

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m3z-6vp-7f8
title: Mononchus truncatus Bastian, 1865

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/81n-hcf-bzg
title: Ophelia borealis Quatrefages, 1866

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c1v-fed-jv2
title: Mononchus truncatus Bastian, 1865

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n9j-ggz-ft6
title: Dero pectinata Aiyer, 1929

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wq7-wps-hh5
title: Platynereis dumerilii (Audouin & Milne Edwards, 1833)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3877084_d2.v1
title: Additional file 2: Table S1. of More than 2500Â years of oil exposure shape sediment microbiomes with the potential for syntrophic degradation of hydrocarbons linked to methanogenesis

description: Selected genes quantified in Keri Lake metagenomes. The gene subunits and the corresponding Uniprot entries of the protein sequences included in each database are listed. (XLS 47Â kb)
DOI: 10.3535/51d-mh7-xj8
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zmd-7sj-ntv
title: Drepanophorus rubrostriatus Hubrecht, 1875

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3f8-42r-3q4
title: Pheretima biserialis (Perrier, 1875)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zrn-5sx-xf7
title: Dugesia ectophysa Marcus, 1953

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.6084/m9.figshare.c.3877084_d2
title: Additional file 2: Table S1. of More than 2500Â years of oil exposure shape sediment microbiomes with the potential for syntrophic degradation of hydrocarbons linked to methanogenesis

description: Selected genes quantified in Keri Lake metagenomes. The gene subunits and the corresponding Uniprot entries of the protein sequences included in each database are listed. (XLS 47Â kb)
DOI: 10.3535/kjn-s8w-c0l
title: Dero Oken, 1815

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vdr-y72-792
title: Eudorylaimus similis (de Man, 1876) Andrássy, 1959

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vhw-qx8-zvk
title: Dorylaimus crassus de Man, 1884

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.v49pzs
title: Occurrence Download

description: A dataset listing the 18303 species recorded in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "Year is 2012"
 ]
}

 The dataset's 18303 records were derived from 406 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040018-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8rndtw
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-73.15292 -36.84076,-73.04629 -36.85647,-73.05921 -36.79501,-73.15099 -36.78977,-73.15292 -36.84076))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Muehlenbeckia hastulata (J.E.Sm.) I.M.Johnst.",
 "Year 2015-2025"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003800-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b8bnzk
title: Occurrence Download

description: A dataset containing 1017 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Idiocerus stigmaticalis Lewis, 1834",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1017 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003801-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.54ymgg
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nicentrus saccharinus Marshall, 1952",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003803-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive121038.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive121038.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0112716.10fu
title: SH0112716.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive121039.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0112717.10fu
title: SH0112717.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive121039.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.