cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.8q5t4/8
title: Supplementary Table 04

description: Carbon-isotope values of plant-derived organic matter from the Lourinhã formation (n = 66). Values range from -29.36‰ to -20.18‰. The average δ13C value for all samples is -22.33‰. PT = northern section; PL = southern section.
DOI: 10.5061/dryad.8sb5h/6
title: McMorran Figure S3
DOI: 10.5061/dryad.9h91m/2
title: Tree data for reconstructing ancestral distributional areas

description: 50K BEAST post-burnin trees and MCC tree for reconstructing ancestral distribution areas.
DOI: 10.5061/dryad.cm1qb/2
title: Ecological_dataset

description: Ecological data collected for individuals included in this study
DOI: 10.5061/dryad.d2f5b/1
title: Individual body elongation Data

description: Individual data includes the identification number (ID), lake of origin, species name and the measurements standard length (SL), body depth (BD), and the ratio of body depth and standard length (BD/SL).
DOI: 10.5061/dryad.fb280/2
title: Poecilia_ATP+ND2+COI.mtDNA.int.n46.Dryad

description: Mitochondrial data set including individuals representative from each main lineage of the Poecilia sphenops complex, and closely related species and sister genus. All individuals have been sequenced for ATPase8/6, ND2 and partial COI mitochondrial genes. Full information of species, collection locality and additional genes sequenced are indicated in the enclosed README file (Table 1 form the original manuscript).
DOI: 10.5061/dryad.h3d26/1
title: Microsatellite Data

description: Data obtained in the laboratory from samples collected in the field.
DOI: 10.5061/dryad.h51jg/2
title: Tolerance parameter estimates from ML
DOI: 10.5061/dryad.hk25q4d6/1
title: data

description: zip file of aligned fasta loci
DOI: 10.5061/dryad.hk2v3/2
title: Static allometry data

description: Data used for analysis of static allometry determining that most species develop sexual dimorphism prior to sexual maturity.
DOI: 10.5061/dryad.jv25p/1
title: Kasumovic&Seebacher Data
DOI: 10.5061/dryad.m42s5/5
title: Growth Sapling Eucs in Ecol Monogr
DOI: 10.5061/dryad.n2582/5
title: GLM_Data

description: Input data used in a GLM to test the effects of evolutionary history and genetic parallelism on the phenotype of E. coli clones in four experimental environments
DOI: 10.5061/dryad.n872j/3
title: Lacey et al. - seed per spike data csv 2012
DOI: 10.5061/dryad.n872j/4
title: Lacey et al. - Spike size x position csv2012
DOI: 10.5061/dryad.p7s88/2
title: Spectral irradiance and illuminance during volatile collection in climate chamber, to accompany Fig 2.
DOI: 10.5061/dryad.pc683/1
title: Tree age, position and genotype

description: Ages, geographic position, and genotype for all Pinus ponderosa individuals in study populations
DOI: 10.5061/dryad.pg4c0/1
title: Supplementary Tables and Figure Legends
DOI: 10.5061/dryad.pg4c0/2
title: Supplementary Figures
DOI: 10.5061/dryad.q32c14q5/2
title: GL1 density scores and GenBank accessions
DOI: 10.5061/dryad.q6r01/1
title: Assessment of kinship cues in rhesus macaque faces

description: Response data collected from human subjects performing a computer-based task in the laboratory. The task involved selecting which of two alternative images presented simultaneously onscreen was perceived as more similar to a target image which was presented at the same time. The images were of free-ranging adult rhesus macaque (Macaca mulatta) faces, collected in the field at Cayo Santiago, Puerto Rico. The sex and degree of genetic relatedness between the individual macaques portrayed onscreen was systematically varied, in order to examine whether humans can detect cues of kinship in the faces of rhesus macaques.
DOI: 10.5061/dryad.qd27g/16
title: final_soap_SW130126

description: final_soap_SW130126.fa: Assembly of Lyssa zampa from Genbank SRA accession #SRR1299769, using multiple kmers (13,23,33,43,63) with SOAPdenovo-Trans v1.01. Different Kmer assemblies were combined with cd-hit-est and processed with the fastx toolkit. See Kawahara and Breinholt (2014) for more details.
DOI: 10.5061/dryad.qd27g/21
title: final_soap_SW130232

description: final_soap_SW130232.fa: Assembly of Eudocima salaminia from Genbank SRA accession #SRR1300148, using multiple kmers (13,23,33,43,63) with SOAPdenovo-Trans v1.01. Different Kmer assemblies were combined with cd-hit-est and processed with the fastx toolkit. See Kawahara and Breinholt (2014) for more details.
DOI: 10.5061/dryad.qd27g/22
title: final_soap_SW130103

description: final_soap_SW130103.fa: Assembly of Anigraea sp. from Genbank SRA accession #SRR1299755, using multiple kmers (13,23,33,43,63) with SOAPdenovo-Trans v1.01. Different Kmer assemblies were combined with cd-hit-est and processed with the fastx toolkit. See Kawahara and Breinholt (2014) for more details.
DOI: 10.5061/dryad.qd27g/24
title: final_soap_FG120015

description: final_soap_FG120015.fa: Assembly of Notoplusia minuta from Genbank SRA accession #SRR1299746, using multiple kmers (13,23,33,43,63) with SOAPdenovo-Trans v1.01. Different Kmer assemblies were combined with cd-hit-est and processed with the fastx toolkit. See Kawahara and Breinholt (2014) for more details.
DOI: 10.5061/dryad.qd27g/25
title: final_soap_FG120122

description: final_soap_FG120122.fa: Assembly of Macrosoma sp. from Genbank SRA accession #SRR1299306, using multiple kmers (13,23,33,43,63) with SOAPdenovo-Trans v1.01. Different Kmer assemblies were combined with cd-hit-est and processed with the fastx toolkit. See Kawahara and Breinholt (2014) for more details.
DOI: 10.5061/dryad.qd27g/28
title: final_soap_GNV120025

description: final_soap_GNV120025.fa: Assembly of Hemiargus ceraunus from Genbank SRA accession #SRR1299274, using multiple kmers (13,23,33,43,63) with SOAPdenovo-Trans v1.01. Different Kmer assemblies were combined with cd-hit-est and processed with the fastx toolkit. See Kawahara and Breinholt (2014) for more details.
DOI: 10.5061/dryad.r73v3/2
title: Parasite_ANOVA

description: Column headings: Fish= Fish ID; Treatment= unparasitized (UN), parasitized (P), parasite removed (REM), parasite added(FUN); SMR= standard metabolic rate; MMR= maximum metabolic rate; AS= factorial aerobic scope; Ucrit= critical swimming speed
DOI: 10.5061/dryad.t4g3r/1
title: Ghosts of habitats past data
DOI: 10.5061/dryad.v10k0/1
title: Dispersal experiment data

description: Data from the seed release experiment
DOI: 10.5061/dryad.v10k0/2
title: Seed bank experiment data

description: Data on the number of germinating seeds sown on the mats subjected to different water regimes
DOI: 10.5061/dryad.v24r8753/1
title: molecular data matrix

description: Aligned molecular data set of five concatenated genes including two mitochondrial and three nuclear
DOI: 10.5061/dryad.v66p0/1
title: The Loci of Evolution catalog

description: See readme file for description of spreadsheet
DOI: 10.5061/dryad.084g8/5
title: CDS data set - LOG output
DOI: 10.5061/dryad.1b549/2
title: Spawning Data
DOI: 10.5061/dryad.1b549/3
title: GSI Data
DOI: 10.5061/dryad.1p888/1
title: data for: Conservation and divergence of gene expression plasticity following ~140 million years of evolution in lodgepole pine (Pinus contorta) and interior spruce (Picea glauca and Picea engelmannii)

description: This archive includes raw data and scripts used for the paper. .dat files contain annotation information in blast2go format.
DOI: 10.5061/dryad.25131/3
title: 100extant_07-28-12

description: R script file for simulations of extant only taxa.
DOI: 10.5061/dryad.2n85d/3
title: The numbers of eggs oviposited by mothers and the numbers of daughters and sons brought up from the eggs in the intra- and inter-specific crossing between Tetranychus urticae and T. evansi.

description: Data sheet used in the analyses of the number of eggs, the juvenile survival rate of offspring and the female sex ratio among offsprings produced by females mated with con- or hetero-specific males or virgin females. "Name" shows the name of the pair. "Experiment" shows the pair of crossing experiment: EE is T. evansi (♀) × T. evansi (♂), EU is T. evansi (♀) × T. urticae (♂), UU is T. urticae (♀) × T. urticae (♂), UE is T. urticae (♀) × T. evansi (♂), U is virgin oviposition by T. urticae (♀) and E is virgin oviposition by T. evansi (♀). "Pfemale" shows the species of mother: E is T. evansi and U is T. urticae. "Comb" shows the crossing type: "Intra" is intraspecific crossing, "Inter" is interspecific crossing and "Unmated" is virgin oviposition. "Male" shows the number of sons. "Female" shows the number of daughters. "Deadlarva" is the number of offspring that died before developing to adult stage. "TotalEgg" shows the number of eggs oviposited by the mother.
DOI: 10.5061/dryad.2n85d/4
title: Population dynamics of Tetranychus urticae and T. evansi on tomato plants (def-1) over a period of 4 weeks after mite introduction

description: Data sheet used in the comparisons of the number of female mites on tomato plants over week among treatments. "Exp" shows the treatment: A is Strong RI, B is Control 1, C is Control 2, D is Mild RI, E is Control 3 and F is Control 4 in Table 1 in the paper. "PotNo" and "PotNo2" show the name or the number of the trials. "DifSp" shows species of the founder females: E is T. evansi and U is T. urticae. "Female" shows the reproductive status of the founder females, unmated or mated. "Week" shows the time when the number of mites was counted. "NO" shows the number of mites. "NO2" shows the number of mites per the number of founder females.
DOI: 10.5061/dryad.2n85d/5
title: R script in the analysis of male choice test
DOI: 10.5061/dryad.3rp1p/1
title: Rego_specimens2

description: Specimen-level data used as the basis for all analyses. Data were obtained by measuring figures in published monographs or compiling them from published tables.
DOI: 10.5061/dryad.43h8c/12
title: chr12
DOI: 10.5061/dryad.4m7d1/1
title: DRYAD_dataflow

description: Excel spreadsheet showing a sample dataflow.
DOI: 10.5061/dryad.4m7d1/2
title: finalOTUseeds

description: Fasta formatted text files with the seed sequence for each OTU used in the study.
DOI: 10.5061/dryad.4m7d1/3
title: perlScripts

description: Perl scripts used in the study.
DOI: 10.5061/dryad.4m7d1/4
title: readidLineageMap

description: Tab delimited text files containing the readID for each OTU seed, taxonomic lineage, and OTU abundance.
DOI: 10.5061/dryad.4m7d1/5
title: barcodePrimerFiles

description: Text files containing the barcodes and primers used in the study.
DOI: 10.5061/dryad.4m7d1/6
title: Rscripts

description: [R] scripts used in the study.
DOI: 10.5061/dryad.50dc6/1
title: Non-reproductive stage of Crella elegans

description: Individual collected by SCUBA on March'10 and fixed in RNAlater. Assembled with CLC Genomics Workbench 4.6.1 (CLC bio, Aarhus, Denmark).
DOI: 10.5061/dryad.52nn2/1
title: Raw data for review on the effects of toxicants on freshwater ecosystem functions
DOI: 10.5061/dryad.54fk2/1
title: Microsatellite data for Ligula intestinalis from Europe and Tunisia
DOI: 10.5061/dryad.54fk2/3
title: Microsatellite data for Ligula intestinalis from Czechia and Tunisia
DOI: 10.5061/dryad.6k1p6/1
title: Supplemental Data Set1

description: Computational analysis of transcriptome-wide AS patterns in AtPTB1/2 misexpression lines.
DOI: 10.5061/dryad.6k1p6/2
title: Supplemental Data Set 2

description: Computational analysis of transcriptome-wide AS patterns in AtPTB3 misexpression lines.
DOI: 10.5061/dryad.6k1p6/3
title: Supplemental Data Set 3

description: Detailed list of GO terms. Based on the MapMan software, AtPTB1/2-regulated genes as well as all genes from TAIR10 were categorized into different functional groups based on their respective GO annotations. Certain groups were combined as listed in tab ‘combination of GO-terms’. A detailed list of the genes belonging to the GO term “RNA” for the AtPTB1/2-regulation targets is provided.
DOI: 10.5061/dryad.77900/1
title: DATA-IGE-2008
DOI: 10.5061/dryad.7d092/1
title: Fig 1-3 raw data

description: raw data related to Figure 1, 2 and 3, organized by figure panel
DOI: 10.5061/dryad.82th6/4
title: 18S-16S rDNA clones from bioaerosol sample G4 (S4F3)

description: 18S-16S rDNA clones from a maize pollen enriched bioaerosol sample collected with a pollen trap (PMF/Sigma 2, TIEM Technique, Germany) in a coexistence field trial in the Ghent area, Belgium. Sequences obtained from sample G4. Primers used: 515f 5’-GTGCCAGCMGCCGCGGTAA-3’ (M=A-C) 1391r 5’-GACGGGCGGTGWGTRCA-3’(W=A-T; R=A-G).
DOI: 10.5061/dryad.82th6/5
title: 18S-16S rDNA clones from bioaerosol sample G6 (S6F1)

description: 18S-16S rDNA clones from a maize pollen enriched bioaerosol sample collected with a pollen trap (PMF/Sigma 2, TIEM Technique, Germany) in a coexistence field trial in the Ghent area, Belgium. Sequences obtained from sample G6. Primers used: 515f 5’-GTGCCAGCMGCCGCGGTAA-3’ (M=A-C) 1391r 5’-GACGGGCGGTGWGTRCA-3’(W=A-T; R=A-G).
DOI: 10.5061/dryad.84m54/5
title: Volumetric data from a micro-CT scan of the anterior end of Lumbrineris latreilli
DOI: 10.5061/dryad.8q5t4/7
title: Supplementary Table 03

description: Carbon-isotope values of carbonate samples (n = 7) from the Stanleyville Group. Only CS34 is suitable for use in soil pCO2 calculations. See text for discussion.
DOI: 10.5061/dryad.9r0p6/1
title: Mapping between ITS and MDA names

description: This files maps between the ITS sequence name and the MDA sequence name.ITS sequence names are described by their well in the ITS sanger sequencing plates (96-well plates)MDA sequence names are described by their well in the MDA reactions plates (384-well plates)ITS sequence name format is as follows:for example: &gt;B245a_520_F02_p18means BATS cruise 245a, MDA plate 520, ITS plate 18 well F02.To find the relavant MDA well use the mapping file ITS_to_MDA_mapping_final.xlsIn this example the MDA well is thus plate 520 well O2
DOI: 10.5061/dryad.9r0p6/2
title: ITS-rRNA multi-alignment of all single cells

description: Alignment of all ITS sequences used to build the trees and heatmaps in Fig. 1.The format of sequence names is as follows:
DOI: 10.5061/dryad.9r0p6/3
title: ITS-rRNA multi-alignment of the 96 single cells

description: Multi-alignment of the ITS of the 96 single cells (as well as of 5 HLII strains) used to generate the tree in Fig 2A.
DOI: 10.5061/dryad.9r0p6/4
title: Mapping between ITS and MDA names (96 single cells)

description: ITS names and MDA names of the 96 single cells.
DOI: 10.5061/dryad.9r0p6/5
title: C1 composite genome

description: Used as a reference genome for the reference-guided assembly. Was built from large overlapping contigs of single-cells within the cN2-C1 clade.
DOI: 10.5061/dryad.9r0p6/6
title: Whole genome alignment of the 96 single cell partial genomes

description: Multi-alignment of the partial genomes of the 96 single cells used to generate the tree in Fig 2B.
DOI: 10.5061/dryad.b31s9/1
title: RAD_Diagnostic_CombinedChip_CallMap

description: Data provided in the following .csv file are from Fluidigm EP1 call map output. See the Fluidigm documentation for details on field names. The chip run used to generate the data is a composite of reads taken after 42 and 46 cycles. For additional information on the number of expected heterozygotes for each locus please see supplementary table 1.
DOI: 10.5061/dryad.b6225/2
title: Table S1

description: Provenance, voucher, field and Genbank accession data for samples used in phylogenetic analyses.
DOI: 10.13145/bacdive118924.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118925.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118926.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118927.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118928.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118929.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118930.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118931.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118932.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118933.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118934.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118935.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118936.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118937.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118938.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.60859/cj62-pz66
title: NG00160
DOI: 10.13145/bacdive118939.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118940.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118941.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118942.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118943.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118944.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118945.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118946.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118947.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118948.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118949.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118950.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118951.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118952.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118953.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118954.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118955.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118956.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118957.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118958.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118959.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118960.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118961.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive118962.20230509.8
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.