cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14853497
title: Additional file 5 of Proteomic and Transcriptomic Analyses Provide Novel Insights into the Crucial Roles of Host-Induced Carbohydrate Metabolism Enzymes in Xanthomonas oryzae pv. oryzae Virulence and Rice-Xoo Interaction

description: Additional file 5: Table S5. GO enrichment analysis of DEGs from four pairwise comparisons.
DOI: 10.25582/data.2023-01.2710112/2298190
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.12756932.v1
title: Additional file 4 of Integrating GWAS, linkage mapping and gene expression analyses reveals the genetic control of growth period traits in rapeseed (Brassica napus L.)

description: Additional file 4: Table S2. List of significant SNPs repeatedly detected for growth period traits by GWAS in B. napus.
DOI: 10.6084/m9.figshare.6465476.v1
title: Additional file 5: of Deep sequencing identification of miRNAs in pigeon ovaries illuminated with monochromatic light

description: KEGG pathway annotations for the target genes of differentially expressed miRNAs. (XLS 2500 kb)
DOI: 10.6084/m9.figshare.12756977.v1
title: Additional file 12 of SMRT and Illumina RNA sequencing reveal novel insights into the heat stress response and crosstalk with leaf senescence in tall fescue

description: Additional file 12. The differential expression of NAC transcription factors in each comparison.
DOI: 10.25582/data.2023-01.2710439/2298191
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710684/2298192
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.12756938.v1
title: Additional file 6 of Integrating GWAS, linkage mapping and gene expression analyses reveals the genetic control of growth period traits in rapeseed (Brassica napus L.)

description: Additional file 6: Table S4. Genes identified in LD block or 300 kb up- and down-stream of significant SNPs identified in GWAS.
DOI: 10.25582/data.2023-01.2715555/2298193
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710483/2298194
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.14853573.v1
title: Additional file 2 of Bone marrow-derived mesenchymal stem/stromal cells in patients with acute myeloid leukemia reveal transcriptome alterations and deficiency in cellular vitality

description: Additional file 2: Additional Table S3. General information of the AML patients.
DOI: 10.6084/m9.figshare.14853579
title: Additional file 4 of Bone marrow-derived mesenchymal stem/stromal cells in patients with acute myeloid leukemia reveal transcriptome alterations and deficiency in cellular vitality

description: Additional file 4: Additional Table S5. The upregulated genes (HD-MSCs vs AML-MSCs).
DOI: 10.25582/data.2023-01.2710641/2298195
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2733159/2298196
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2708621/2298197
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2706040/2298198
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709979/2298199
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710406/2298200
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2707137/2298201
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.14329691.v1
title: Additional file 4 of Development of genic KASP SNP markers from RNA-Seq data for map-based cloning and marker-assisted selection in maize

description: Additional file 4. The results of validation of the accuracy and polymorphism of the 50 KASP SNP markers.
DOI: 10.6084/m9.figshare.12756986.v1
title: Additional file 1 of SMRT and Illumina RNA sequencing reveal novel insights into the heat stress response and crosstalk with leaf senescence in tall fescue

description: Additional file 1. Numbers and distribution rate of unigenes in seven databases.
DOI: 10.25582/data.2023-01.2710245/2298202
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.12756974
title: Additional file 11 of SMRT and Illumina RNA sequencing reveal novel insights into the heat stress response and crosstalk with leaf senescence in tall fescue

description: Additional file 11 The differential expression of Hsfs in each comparison.
DOI: 10.6084/m9.figshare.12756983
title: Additional file 14 of SMRT and Illumina RNA sequencing reveal novel insights into the heat stress response and crosstalk with leaf senescence in tall fescue

description: Additional file 14. All primers used in this study.
DOI: 10.25582/data.2023-01.2711447/2298203
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.12756998
title: Additional file 5 of SMRT and Illumina RNA sequencing reveal novel insights into the heat stress response and crosstalk with leaf senescence in tall fescue

description: Additional file 5. The differential expression of DEGs in comparison V1.
DOI: 10.6084/m9.figshare.12756998.v1
title: Additional file 5 of SMRT and Illumina RNA sequencing reveal novel insights into the heat stress response and crosstalk with leaf senescence in tall fescue

description: Additional file 5. The differential expression of DEGs in comparison V1.
DOI: 10.6084/m9.figshare.19875217
title: Anxiety Dataset 2022

description: The peer-reviewed paper associated with this dataset has now been published in MDPI Data, and can be accessed here: https://www.mdpi.com/2306-5729/7/9/132. 
Please cite this when using the dataset. 
<strong>To download data files, please go to Version 1.</strong>
<strong>To read the paper, please go to Version 2.</strong>
---------------------------------------------------------------------
Nineteen volunteers (14 males and 5 females; age range: 18--56 years) from different cultural backgrounds participated in the data collection experiment. These participants were all students recruited from Simon Fraser University, Canada. The experiment was set up to induce stress in an alternating manner: positive video (nonstress induction) followed by negative video (stress induction). 
<br>
Metadata can be downloaded from here:
https://github.com/Elgendi/Anxiety-Dataset-MetaData-2022
DOI: 10.6084/m9.figshare.12757004.v1
title: Additional file 7 of SMRT and Illumina RNA sequencing reveal novel insights into the heat stress response and crosstalk with leaf senescence in tall fescue

description: Additional file 7. The differential expression of DEGs in comparison V2.
DOI: 10.6084/m9.figshare.12757007
title: Additional file 8 of SMRT and Illumina RNA sequencing reveal novel insights into the heat stress response and crosstalk with leaf senescence in tall fescue

description: Additional file 8. The differential expression of DEGs in comparison V5.
DOI: 10.6084/m9.figshare.12757007.v1
title: Additional file 8 of SMRT and Illumina RNA sequencing reveal novel insights into the heat stress response and crosstalk with leaf senescence in tall fescue

description: Additional file 8. The differential expression of DEGs in comparison V5.
DOI: 10.6084/m9.figshare.14329694.v1
title: Additional file 5 of Development of genic KASP SNP markers from RNA-Seq data for map-based cloning and marker-assisted selection in maize

description: Additional file 5. The information of SNP mining in the 368 RNA-Seq data sets.
DOI: 10.6084/m9.figshare.6468467
title: Supplemental Table 4. Estimated increments in each lipid levels (z-score) per 1 standard deviation of BMI, FMI, and FMP in boys and girls by age group

description: The
associations of BMI, and FMI with TC and LDL-C were stronger in the
older (boys ≥ 11 y, girls ≥ 10 y) than in the younger age group (boys &lt; 11 y, girls &lt;
10 y) (<i>P</i> for
interaction<i> </i>&lt; 0.05). The differences between increments per 1 SD of FMI and BMI for lipid profiles
(except for HDL-C) in older boys were greater than in younger boys.
DOI: 10.25582/data.2023-01.2711363/2298204
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.14329697.v1
title: Additional file 1 of Molecular characteristics of Brucella melitensis isolates from humans in Qinghai Province, China

description: Additional file 1: Table S1. B. melitensis genome information.
DOI: 10.6084/m9.figshare.12756902
title: Additional file 1 of Integrating GWAS, linkage mapping and gene expression analyses reveals the genetic control of growth period traits in rapeseed (Brassica napus L.)

description: Additional file 1: Table S1. ANOVA analysis of five growth period traits in GWAS(a) and linkage mapping(b).
DOI: 10.6084/m9.figshare.14853579.v1
title: Additional file 4 of Bone marrow-derived mesenchymal stem/stromal cells in patients with acute myeloid leukemia reveal transcriptome alterations and deficiency in cellular vitality

description: Additional file 4: Additional Table S5. The upregulated genes (HD-MSCs vs AML-MSCs).
DOI: 10.25582/data.2023-01.2705785/2298205
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.12756986
title: Additional file 1 of SMRT and Illumina RNA sequencing reveal novel insights into the heat stress response and crosstalk with leaf senescence in tall fescue

description: Additional file 1. Numbers and distribution rate of unigenes in seven databases.
DOI: 10.25582/data.2023-01.2709579/2298206
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.12757094.v1
title: Additional file 2 of Human umbilical cord-derived mesenchymal stem cells prevent the progression of early diabetic nephropathy through inhibiting inflammation and fibrosis

description: Additional file 2: Figure S1. Immunofluorescence staining of F4/80 and CD3 in the glomerulus of DN kidney tissues. G: glomerulus. Figure S2. Isolation and identification of exosomes extracted from UC-MSCs (UC-MSCs-Exo). Figure S3. UC-MSCs-CM depressed cytokine expression in high glucose-injured NRK-52E cells. Figure S4. UC-MSCs-CM or UC-MSCs-Exo depressed cytokine expression in high glucose-injured hrGECs.
DOI: 10.25582/data.2023-01.2710288/2298207
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.6465449.v1
title: Additional file 3: of Deep sequencing identification of miRNAs in pigeon ovaries illuminated with monochromatic light

description: Characteristics of novel miRNA candidates. (XLS 337 kb)
DOI: 10.6084/m9.figshare.22194261
title: Grade 4 Neutropenia Frequency as a Binary Risk Predictor for Adverse Clinical Consequences of Chemotherapy‑Induced Neutropenia: A Meta-analysis

description: Neutropenia is the major toxicity of myelosuppressive cancer chemotherapy. Grade 4 neutropenia (Gr4N) is a measure of chemotherapy-induced neutropenia (CIN) severity. We conducted a meta-analysis of CIN data. Gr4N incidence was significantly correlated with febrile neutropenia (FN), days of severe neutropenia (DSN), and nadir absolute neutrophil count (ANC), which are all important predictors of morbidity. With a Gr4N threshold of 65%, both FN and DSN were below levels for low risk of adverse CIN outcomes. Gr4N was highly predictive for adverse CIN outcomes, and a 65% threshold demarcated low vs. high risk for FN and other adverse CIN outcomes.
DOI: 10.25582/data.2023-02.2732237/2298208
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.12756917.v1
title: Additional file 24 of Integrating GWAS, linkage mapping and gene expression analyses reveals the genetic control of growth period traits in rapeseed (Brassica napus L.)

description: Additional file 24: Table S14. List of SNP markers with pleiotropic effect.
DOI: 10.6084/m9.figshare.12756932
title: Additional file 4 of Integrating GWAS, linkage mapping and gene expression analyses reveals the genetic control of growth period traits in rapeseed (Brassica napus L.)

description: Additional file 4: Table S2. List of significant SNPs repeatedly detected for growth period traits by GWAS in B. napus.
DOI: 10.6084/m9.figshare.12757094
title: Additional file 2 of Human umbilical cord-derived mesenchymal stem cells prevent the progression of early diabetic nephropathy through inhibiting inflammation and fibrosis

description: Additional file 2: Figure S1. Immunofluorescence staining of F4/80 and CD3 in the glomerulus of DN kidney tissues. G: glomerulus. Figure S2. Isolation and identification of exosomes extracted from UC-MSCs (UC-MSCs-Exo). Figure S3. UC-MSCs-CM depressed cytokine expression in high glucose-injured NRK-52E cells. Figure S4. UC-MSCs-CM or UC-MSCs-Exo depressed cytokine expression in high glucose-injured hrGECs.
DOI: 10.25582/data.2023-01.2711374/2298209
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.14332814
title: Table S1

description: Table S1
DOI: 10.6084/m9.figshare.14853488
title: Additional file 2 of Proteomic and Transcriptomic Analyses Provide Novel Insights into the Crucial Roles of Host-Induced Carbohydrate Metabolism Enzymes in Xanthomonas oryzae pv. oryzae Virulence and Rice-Xoo Interaction

description: Additional file 2: Table S2. Gene ontology (GO) annotations of DEGs from four pairwise comparisons.
DOI: 10.25582/data.2023-01.2708243/2298210
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2707235/2298211
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.6465734.v1
title: Additional file 5: of Insights into the ecology, evolution, and metabolism of the widespread Woesearchaeotal lineages

description: Dataset S4 Functional genes annotation of 19 genomic bins by BLASTing against the GenBank NCBI-nr Dataset used for inferring the metabolic potentials in the main text Figs.Â 5 and 6 as well as AdditionalÂ fileÂ 1: Figure S4. (XLSX 1571 kb)
DOI: 10.25582/data.2023-01.2710172/2298212
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732769/2298213
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.6465692.v1
title: Additional file 2: of Insights into the ecology, evolution, and metabolism of the widespread Woesearchaeotal lineages

description: Dataset S1 Maximum likelihood tree based on 663 representative 16S rRNA alignment (AdditionalÂ fileÂ 7: Dataset S5), basis for Fig.Â 2a, in result format (663_OTU_RAxML_bipartitionsBranchLabels. result, generated by The CIPRES Science Gateway). (RESULT 39 kb)
DOI: 10.25582/data.2023-01.2712163/2298214
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.14854271.v1
title: Ultrasound-Stimulated Microbubbles Inhibit Aggressive Phenotypes and Promotes Radiosensitivity of esophageal squamous cell carcinoma

description: Ultrasound (US) is reported to improve the delivery efficiency of drugs loading onto large nanoparticles due to the sonoporation effect. Microbubbles (MBs) can be used as contrast agents of US expanding and contracting under low-amplitude US pressure waves. Ultrasound-stimulated microbubbles (USMBs) therapy is a promising option for the treatment of various cancers as a radiosensitizer. However, its role in esophageal squamous cell carcinoma (ESCC) remains unknown. In our study, human ESCC cell lines (KYSE-410, KYSE-1140) were treated with radiation solely, US alone, or radiation in combination with US or USMBs. The migration and invasion abilities of ESCC cells were examined by wound healing and Transwell assays. ESCC cell apoptosis was assessed using flow cytometry analysis and TUNEL assays. The levels of proteins associated with cell apoptosis and angiogenesis were measured by western blot analysis. A tube formation assay was performed to detect the ESCC cell angiogenesis. We found that USMBs at high levels most effectively most efficiently enhanced the effect of radiation, and significant changes in the viability (48%-51%), proliferation (1%), migration (63%-71%), invasion (52%) and cell apoptosis (31%-50%) of ESCC cells were observed compared with the control group in vitro. The ESCC angiogenesis was inhibited by US or radiation treatment and further inhibited by a combination of radiation and US or USMBs. USMBs at high levels most effectively enhanced the inhibitory effect of radiotherapy on ESCC cell apoptosis. Overall, USMBs enhanced the radiosensitivity of esophageal squamous cell carcinoma cells. Graphical abstract USMBs treatment enhanced the anti-tumor effect of radiation on ESCC cell proliferation, migration, invasion, angiogenesis and apoptosis in vitro. 1USMBs enhance the radiation-induced inhibition on ESCC cell growth 2USMBs promote the radiation effect on ESCC cell apoptosis 3USMBs enhance radiation-caused suppression on ESCC cell migration and invasion 4USMBs enhance the suppression of radiation on ESCC angiogenesis
DOI: 10.25582/data.2023-01.2706477/2298215
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2708980/2298216
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2705666/2298217
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2711419/2298218
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2711418/2298219
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2708672/2298220
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.8041418
title: Approximate multivariate distribution of key performance indicators through ordered block model and pair-copula construction

description: Key Performance Indicators (KPIs) play an important role in comprehending and improving a manufacturing system. This article proposes a novel method using Ordered Block Model and Pair-Copula Construction (OBM-PCC) to approximate the multivariate distribution of KPIs. The KPIs are treated as random variables in the OBM and studied under the stochastic queuing framework. The dependence structure of the OBM represents the influence flow from system input parameters to KPIs. Based on the OBM structure, the PCC is employed to simultaneously approximate the joint probability density function represented by KPIs and quantify the KPI values. The OBM-PCC model removes the redundant pair-copulas in traditional modeling, at the same time enjoying the flexibility and desirable analytical properties in KPI modeling, thus efficiently providing the accurate approximation. Extensive numerical studies are presented to demonstrate the effectiveness of the OBM-PCC model.
DOI: 10.6084/m9.figshare.8041418.v1
title: Approximate multivariate distribution of key performance indicators through ordered block model and pair-copula construction

description: Key Performance Indicators (KPIs) play an important role in comprehending and improving a manufacturing system. This article proposes a novel method using Ordered Block Model and Pair-Copula Construction (OBM-PCC) to approximate the multivariate distribution of KPIs. The KPIs are treated as random variables in the OBM and studied under the stochastic queuing framework. The dependence structure of the OBM represents the influence flow from system input parameters to KPIs. Based on the OBM structure, the PCC is employed to simultaneously approximate the joint probability density function represented by KPIs and quantify the KPI values. The OBM-PCC model removes the redundant pair-copulas in traditional modeling, at the same time enjoying the flexibility and desirable analytical properties in KPI modeling, thus efficiently providing the accurate approximation. Extensive numerical studies are presented to demonstrate the effectiveness of the OBM-PCC model.
DOI: 10.25582/data.2023-01.2706971/2298221
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709683/2298222
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2706067/2298223
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2705607/2298224
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2716637/2298225
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2733162/2298226
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2710825/2298227
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2707319/2298228
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2709943/2298229
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2706556/2298230
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2708644/2298231
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-02.2732721/2298232
title: Data for EMSL Project 51287 from February 2023
DOI: 10.25582/data.2023-01.2709083/2298233
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2711019/2298234
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2710115/2298235
title: Data for EMSL Project 51287 from January 2023
DOI: 10.25582/data.2023-01.2707513/2298236
title: Data for EMSL Project 51287 from January 2023
DOI: 10.6084/m9.figshare.14853485.v1
title: Additional file 1 of Proteomic and Transcriptomic Analyses Provide Novel Insights into the Crucial Roles of Host-Induced Carbohydrate Metabolism Enzymes in Xanthomonas oryzae pv. oryzae Virulence and Rice-Xoo Interaction

description: Additional file 1: Table S1. Detailed information of DEGs from four pairwise comparisons.
DOI: 10.6084/m9.figshare.14853491
title: Additional file 3 of Proteomic and Transcriptomic Analyses Provide Novel Insights into the Crucial Roles of Host-Induced Carbohydrate Metabolism Enzymes in Xanthomonas oryzae pv. oryzae Virulence and Rice-Xoo Interaction

description: Additional file 3: Table S3. COG annotations of DEGs from four pairwise comparisons.
DOI: 10.25582/data.2023-02.2733110/2298237
title: Data for EMSL Project 51287 from February 2023
DOI: 10.6084/m9.figshare.14854271
title: Ultrasound-Stimulated Microbubbles Inhibit Aggressive Phenotypes and Promotes Radiosensitivity of esophageal squamous cell carcinoma

description: Ultrasound (US) is reported to improve the delivery efficiency of drugs loading onto large nanoparticles due to the sonoporation effect. Microbubbles (MBs) can be used as contrast agents of US expanding and contracting under low-amplitude US pressure waves. Ultrasound-stimulated microbubbles (USMBs) therapy is a promising option for the treatment of various cancers as a radiosensitizer. However, its role in esophageal squamous cell carcinoma (ESCC) remains unknown. In our study, human ESCC cell lines (KYSE-410, KYSE-1140) were treated with radiation solely, US alone, or radiation in combination with US or USMBs. The migration and invasion abilities of ESCC cells were examined by wound healing and Transwell assays. ESCC cell apoptosis was assessed using flow cytometry analysis and TUNEL assays. The levels of proteins associated with cell apoptosis and angiogenesis were measured by western blot analysis. A tube formation assay was performed to detect the ESCC cell angiogenesis. We found that USMBs at high levels most effectively most efficiently enhanced the effect of radiation, and significant changes in the viability (48%-51%), proliferation (1%), migration (63%-71%), invasion (52%) and cell apoptosis (31%-50%) of ESCC cells were observed compared with the control group in vitro. The ESCC angiogenesis was inhibited by US or radiation treatment and further inhibited by a combination of radiation and US or USMBs. USMBs at high levels most effectively enhanced the inhibitory effect of radiotherapy on ESCC cell apoptosis. Overall, USMBs enhanced the radiosensitivity of esophageal squamous cell carcinoma cells. Graphical abstract USMBs treatment enhanced the anti-tumor effect of radiation on ESCC cell proliferation, migration, invasion, angiogenesis and apoptosis in vitro. 1USMBs enhance the radiation-induced inhibition on ESCC cell growth 2USMBs promote the radiation effect on ESCC cell apoptosis 3USMBs enhance radiation-caused suppression on ESCC cell migration and invasion 4USMBs enhance the suppression of radiation on ESCC angiogenesis
DOI: 10.25582/data.2023-01.2711146/2298238
title: Data for EMSL Project 51287 from January 2023