cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.18017555.v1
title: Lombok

description: Most important files and data used in my master-thesis at the location Lombok. As the size would be to much, most of the data mentioned in the methods are not listed.<br><br>Please note: As a restirction of fig-share, I cannot upload folders! Hence all files are sort of loose together. QGIS should be able to find the files when the .qgz file is opend with the "auto-find" option.<br>
DOI: 10.6084/m9.figshare.11625630
title: Facebook Data

description: Data has been collected from special needs teacher education students enrolled in the universities of Pakistan.
DOI: 10.6084/m9.figshare.18019727
title: Stoupa

description: Most important files and data used in my master-thesis at the location Stoupa. As the size would be to much, most of the data mentioned in the methods are not listed.<br><br>Please note: As a restirction of fig-share, I cannot upload folders! Hence all files are sort of loose together. QGIS should be able to find the files when the .qgz file is opend with the "auto-find" option.<br>
DOI: 10.6084/m9.figshare.18019727.v1
title: Stoupa

description: Most important files and data used in my master-thesis at the location Stoupa. As the size would be to much, most of the data mentioned in the methods are not listed.<br><br>Please note: As a restirction of fig-share, I cannot upload folders! Hence all files are sort of loose together. QGIS should be able to find the files when the .qgz file is opend with the "auto-find" option.<br>
DOI: 10.6084/m9.figshare.11625630.v4
title: Facebook Data

description: Data has been collected from special needs teacher education students enrolled in the universities of Pakistan.
DOI: 10.6084/m9.figshare.18021557
title: Port Miou

description: Most important files and data used in my master-thesis at the location Port Miou. As the size would be to much, most of the data mentioned in the methods are not listed.<br><br>Please note: As a restirction of fig-share, I cannot upload folders! Hence all files are sort of loose together. QGIS should be able to find the files when the .qgz file is opend with the "auto-find" option.
DOI: 10.6084/m9.figshare.18021557.v1
title: Port Miou

description: Most important files and data used in my master-thesis at the location Port Miou. As the size would be to much, most of the data mentioned in the methods are not listed.<br><br>Please note: As a restirction of fig-share, I cannot upload folders! Hence all files are sort of loose together. QGIS should be able to find the files when the .qgz file is opend with the "auto-find" option.
DOI: 10.15472/d5ebzc
title: Especies de Flora Identificadas en el Zonoecotono Microcuenca Alta Río Tillavá, Vereda Rubiales Municipio de Puerto Gaitán Departamento del Meta

description: Lista con 369 especies de flora pertenecientes a 35 ordenes y 84 familias identificadas en la Macrocuenca Alta Río Tillavá, Vereda Rubiales Municipio de Puerto Gaitán Departamento del Meta, en el marco de la corroboración hecha en campo de objetos de conservación de filtro grueso y fino del proyecto para el Contrato Nº 09-09-0206-0296 que adelantó las labores de carácter técnico relacionadas con la recopilación tanto regional como local de la información primaria y secundaria requerida para la identificación de prioridades de conservación y la formulación de los lineamientos de gestión en el territorio de los Llanos Orientales, dentro del convenio 09-206 de 2009 “Planeación ambiental para la conservación de la biodiversidad en las áreas operativas de ECOPETROL en los llanos orientales de Colombia”. La lista fue ajustada de la base de datos original del contrato Nº 09-09-0206-0296 como parte del trabajo desarrollado en el contrato Nº 15-14/333-15/0075-062PS para estructurar y validar al menos 10 conjuntos de datos de información biológica rastreada del archivo Institucional correspondiente a la región de la Orinoquia, así como también documentar a través de metadatos la información estructurada.
DOI: 10.6084/m9.figshare.18060794
title: 07Dec21 ClonalFrameML outputs

description: Outputs from recombination interference using ClonalFrameML on a maximum-likelihood tree of 538 S. epidermidis isolates
DOI: 10.15472/pctfmy
title: Especies de Flora identificadas en mesetas de Aguamaco, El Oso, valle aluvial del Rio Caja y Chitamena, Municipio de Tauramena, Departamento del Casanare

description: Lista con 282 especies de flora pertenecientes a 32 ordenes y 64 familias identificadas en mesetas de Aguamaco, El Oso, valle aluvial del Rio Caja y Chitamena, Municipio de Tauramena, Departamento del Casanare, en el marco de la corroboración hecha en campo de objetos de conservación de filtro grueso y fino del proyecto para el Contrato Nº 09-09-0206-0296 que adelantó las labores de carácter técnico relacionadas con la recopilación tanto regional como local de la información primaria y secundaria requerida para la identificación de prioridades de conservación y la formulación de los lineamientos de gestión en el territorio de los Llanos Orientales, dentro del convenio 09-206 de 2009 “Planeación ambiental para la conservación de la biodiversidad en las áreas operativas de ECOPETROL en los llanos orientales de Colombia”. La lista fue ajustada del informe correspondiente al contrato Nº 09-09-0206-0296 como parte del trabajo desarrollado en el contrato Nº 15-14/333-15/0075-062PS para estructurar y validar al menos 10 conjuntos de datos de información biológica rastreada del archivo Institucional correspondiente a la región de la Orinoquia, así como también documentar a través de metadatos la información estructurada.
DOI: 10.5063/f13f4n1p
title: York University Tree Inventory: Health

description: Trees are important parts of urban spaces, and their health is an important concern for urban planners. Urban trees are subject to higher levels of disturbance both directly from human activity or indirectly through pollution or climate effects caused by urbanization. One potential disturbance factor on tree health is ground vibration caused by underground subway lines. Ground vibration from subways has been known to cause structural damage on buildings and structures such as bridges and highways, and trees are analogous permanent natural structures rooted in the ground. To date, there has been little research specifically concerning the effects of ground vibrations on tree health. This study is a longitudinal study examining the effects of a recently built subway line underneath the York University campus on tree health. Using data from a tree census conducted prior to the Toronto Transit Commission subway extension running directly under the university becoming fully functional, and a new set of data collected over October 2020 to March 2021, this study examined the effects of subway disturbance on the growth and health of 745 trees on the York University campus. Trees from ten different species were measured at varying distances from the subway line with groups both within and outside of 200 meters from the subway. It was hypothesized that tree growth and health would decrease closer to the subway, and that species-specific patterns would be observed. However, this study found no significant relationship between distance from the subway and tree growth or health.
DOI: 10.6084/m9.figshare.16592609.v2
title: Breaching and maintaining social distancing through blended learning during COVID-19

description: Breaching and maintaining social distancing through blended learning during COVID-19
DOI: 10.3886/e158841
title: A detection system to monitor and manage falls among wheelchair users: Phase 1

description: Falls events are common among wheelchair users, and associated with injury, declines in performance of activities of daily living, hospital admissions and admission to long term care facilities. To facilitate successful aging-in-place among individuals in the target population, this project will develop a smart, multi-component system that will accurately detect falls from a wheelchair and notify caregivers to enable a quick response to reduce the amount of time an individual spends lying (“lie time”) on the ground. The first phase of this study (Phase #1) will examine fall acceleration patterns from a wheelchair. This data will be used to develop a prototype customizable fall detection system that is able to accurately detect a fall from a wheelchair. The development and testing of the fall detection prototype will be completed at a later date and is not described in this IRB application.
description: Presence of Common Scales: Data from accelerometer placed at the chest, wrist, and back head.
description: 30 individuals were recruited
description: Adults able-bodied between 18-30 years old.
description: other;
DOI: 10.3886/e158841v1
title: A detection system to monitor and manage falls among wheelchair users: Phase 1

description: Falls events are common among wheelchair users, and associated with injury, declines in performance of activities of daily living, hospital admissions and admission to long term care facilities. To facilitate successful aging-in-place among individuals in the target population, this project will develop a smart, multi-component system that will accurately detect falls from a wheelchair and notify caregivers to enable a quick response to reduce the amount of time an individual spends lying (“lie time”) on the ground. The first phase of this study (Phase #1) will examine fall acceleration patterns from a wheelchair. This data will be used to develop a prototype customizable fall detection system that is able to accurately detect a fall from a wheelchair. The development and testing of the fall detection prototype will be completed at a later date and is not described in this IRB application.
description: Presence of Common Scales: Data from accelerometer placed at the chest, wrist, and back head.
description: 30 individuals were recruited
description: Adults able-bodied between 18-30 years old.
description: other;
DOI: 10.5063/f1zp44jc
title: York University Tree Inventory: Commensalism

description: Disturbances are human-mediated or natural events that can lead to a change in the ecosystem by affecting the physical environment, leading to a change in the biotic relationships (between organisms) and the abiotic arrangements, such as water and soil. There are different hypotheses to predict the disturbance such as the intermediate hypothesis (IDH) and the enemy release hypothesis (ERH). The IDH hypothesis suggests that intermediate levels of disturbance will result in species diversity, while the ERH predicts that the number of invasive tree species will be increased due to the reduced number of predators in the new area. The purpose of this project is to examine the effect of subway disturbances on symbiotic relationships, such as presence of gypsy moths and lichens on trees, and overall trees’ health at the York university campus. 854 trees were assessed at various distances from the subway line disturbances. There were more gypsy moth egg masses within the subway line than outside. In addition, there was a relatively high richness in lichens on trees located outside of the subway station compared to within. Disturbances affect pathogens as it can lead to outbreaks in tree parasites, such as gypsy moths, in an area. These gypsy moths can then become a natural disturbance, affecting the trees’ health, and leading to a change in the symbiotic relationships. Overall, it is difficult to predict the effects of disturbances as it is measured using different factors: the intensity, timing, extent, duration, and the frequency of disturbance.
DOI: 10.5281/zenodo.5827919
title: PDTXBreast

description: PDTXBreast PharmacoSet (PSet) generated by ORCESTRA. Metadata can be found on ORCESTRA at: http://orcestra.ca/pset/10.5281/zenodo.5827919
DOI: 10.5281/zenodo.5827918
title: PDTXBreast

description: PDTXBreast PharmacoSet (PSet) generated by ORCESTRA. Metadata can be found on ORCESTRA at: http://orcestra.ca/pset/10.5281/zenodo.5827919
DOI: 10.5281/zenodo.5827917
title: GBM_scr3

description: GBM PharmacoSet (PSet) generated by ORCESTRA. Metadata can be found on ORCESTRA at: http://orcestra.ca/pset/10.5281/zenodo.5827917
DOI: 10.5281/zenodo.5827916
title: GBM_scr3

description: GBM PharmacoSet (PSet) generated by ORCESTRA. Metadata can be found on ORCESTRA at: http://orcestra.ca/pset/10.5281/zenodo.5827917
DOI: 10.5281/zenodo.5827902
title: GBM_scr2

description: GBM PharmacoSet (PSet) generated by ORCESTRA. Metadata can be found on ORCESTRA at: http://orcestra.ca/pset/10.5281/zenodo.5827902
DOI: 10.5281/zenodo.5827901
title: GBM_scr2

description: GBM PharmacoSet (PSet) generated by ORCESTRA. Metadata can be found on ORCESTRA at: http://orcestra.ca/pset/10.5281/zenodo.5827902
DOI: 10.15472/jj2yfb
title: Especies de Fauna Reportadas en los Libros Rojos de Colombia 2010

description: Lista de 203 especies de fauna (Mamíferos, Aves, Anfibios, Peces, Reptiles), reportadas en los Libros Rojos de Colombia contiene información de distribución, historia natural, usos, amenazas y oportunidades de conservación. La lista fue ajustada de las bases de datos originales del contrato No. 10-09-206-100PS como parte del trabajo desarrollado en el contrato Nº 15-14/333-15/0075-062 PS para estructurar y validar al menos 10 conjuntos de datos de información biológica rastreada del archivo Institucional correspondiente a la región de la Orinoquia, así como también documentar a través de metadatos la información estructurada.
DOI: 10.34740/kaggle/dsv/3017128
title: Omicron daily cases by country (COVID-19 variant)
DOI: 10.6084/m9.figshare.17064080
title: Genome context influences evolutionary flexibility of nearly identical type III effectors in two phytopathogenic Pseudomonads

description: Assembled and annotated genome sequences for PmaES4326 strains PmaES4326ΔDQ3 and PmaES4326-C-LA-P5-20-1
DOI: 10.6084/m9.figshare.17064080.v2
title: Genome context influences evolutionary flexibility of nearly identical type III effectors in two phytopathogenic Pseudomonads

description: Assembled and annotated genome sequences for PmaES4326 strains PmaES4326ΔDQ3 and PmaES4326-C-LA-P5-20-1
DOI: 10.6084/m9.figshare.17064080.v1
title: Genome context influences evolutionary flexibility of nearly identical type III effectors in two phytopathogenic Pseudomonads

description: Assembled and annotated genome sequences for PmaES4326 strains PmaES4326ΔDQ3 and PmaES4326-C-LA-P5-20-1
DOI: 10.18434/mds2-2301
title: Dataset: An Open Combinatorial Diffraction Dataset Including Consensus Human and Machine Learning Labels with Quantified Uncertainty for Training New Machine Learning Models
DOI: 10.6084/m9.figshare.3761562.v2097
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.25345/c5687s
title: MassIVE MSV000088659 - CLUC CLUT DNA binding proteins
title: Alzheimers disease (AD) is the most common form of dementia in the elderly with no cure. Although huge efforts have been made to develop drugs for AD, most programs aimed for disease-modifying therapies have failed. Possible reasons for the high failure rate include insufficient understanding of mechanisms underlying AD pathogenesis. The C allele of rs11136000 variant in the clusterin (CLU) gene represents the third strongest known genetic risk factor for late-onset AD. However, whether the CLU rs11136000 SNP is functional and what are molecular mechanisms underlying the risk effect of the CLU variant remain unknown. In this study, we identified the CLU rs11136000 SNP as a functional variant by CRIPSR/Cas9 knockout of the SNP. Moreover, by switching the risk C and the protective T alleles using CRISPR/Cas9 editing, we generated isogenic iPSCs with different alleles of the CLU rs11136000 SNP. Astrocytes derived from isogenic iPSCs carrying the C or T allele exhibited different CLU expression and differential inflammatory response. C/C astrocytes carrying two C alleles expressed higher level of CLU and exhibited elevated interferon (IFN) response and CXCL10 expression upon TNFalpha/IL1beta treatment. Furthermore, using human iPSC-derived astrocytes and OPCs co-cultured on nanofibers, we demonstrated that elevated CXCL10 expression in C/C astrocytes induced by TNFalpha/IL1beta led to inhibition of OPC proliferation and myelination. Our study uncovers a mechanism underlying reduced white matter integrity observed in the CLU rs11136000 risk C allele carriers. This knowledge could help us to design more effective strategies to treat AD by targeting IFN response and CXCL10 that are upstream of myelination deficits, an early event in AD pathogenesis that proceeds before cognitive decline.
DOI: 10.6073/pasta/babcc869806031bf5d27f7f59579baa0
title: North Temperate Lakes LTER Processed eddy covariance time series fluxes from tower located on roof of the CFL building oriented toward Lake Mendota 2012 - current

description: We calculated eddy covariance based fluxes of CO2, H2O, heat, and momentum to study lake-atmosphere exchanges since 2012. These data were collected by Ankur Desai from 2012 to present using a CSAT-3 sonic anemometer and LI-7500 gas analyzer located on the roof of the CFL building. A footprint model (Kljun) was used to screen for lake only data.
DOI: 10.6073/pasta/925c177e9cbc0035dd5f97dbc8b5947d
title: North Temperate Lakes LTER: High Frequency Data: Meteorological, Dissolved Oxygen, Chlorophyll, Phycocyanin - Lake Mendota Buoy 2006 - current

description: &lt;p&gt;The instrumented buoy on Lake Mendota is equipped with a dissolved oxygen sensor, a thermistor chain, and meteorological sensors that provide fundamental information on lake thermal structure, weather conditions, and lake metabolism. Data are collected every minute. Hourly and daily averages for water temperatures are derived from the high resolution data. The D-Opto dissolved oxygen sensor is 0.5m from the lake surface. In 2006, the thermistors were placed every 0.5 m from the surface through 7m and every 1m from 7m to 15m. In 2007 and 2008, the thermistors were placed every 0.5 m from the surface through 2m and every 1m from 2m to 20m. Meteorological sensors measure wind speed, wind direction, relative humidity, air temperature, photosynthetically active radiation (PAR), and barometric pressure. Not all sensors are deployed each season. After correcting for flux to or from the atmosphere and vertical mixing within the water column, high frequency measurements of dissolved gases such as carbon dioxide and oxygen can be used to estimate gross primary productivity, respiration, and net ecosystem productivity, the basic components of whole lake metabolism. The instrumented buoy was deployed in Lake Mendota in 2006 from June 27 to October 17. In 2007, from May 18 to October 29. In 2008, from 26 Jun to 14 Nov. In 2009, the buoy was deployed from April 17 to Nov 23. In 2009+, the Mendota buoy was located at 43.0995, -89.4045. 2017 notes: the buoy was deployed from Apr 22 to November 13. A boating mishap caused the loss of the air temp, humidity, and wind sensors between May 28 and July 11. The dissolved oxygen sensor had significant biofouling from algae and at least one zebra mussel during the year. The sampling frequency is one minute. Number of sites: 1&lt;/p&gt;
DOI: 10.6073/pasta/2ac4677a929290462877fd0df375ffa4
title: Nitrogen mineralization rate: BioCON : Biodiversity, Elevated CO2, and N Enrichment

description: BioCON (Biodiversity, CO2, and Nitrogen) is an ecological experiment started in 1997 at the University of Minnesota's Cedar Creek Ecosystem Science Reserve. BioCON's goal is to explore the ways in which plant communities will respond to three environmental changes that are known to be occurring on a global scale: increasing nitrogen deposition, increasing atmospheric CO2, and decreasing biodiversity. Why Biodiversity, CO2, and Nitrogen? While there are many uncertainties in global change biology, there are also some well documented facts. Some of these are: 1. The amount of carbon dioxide (CO2) in the atmosphere is rising. Since the industrial revolution, the CO2 concentration in the atmosphere has increased from approximately 275 parts per million (ppm) to about 378 ppm today. This has been largely the result of fossil fuel burning. It is expected that CO2 levels will continue to rise, and that by the year 2050 these levels will be approximately 550 ppm. CO2 is the raw material for photosynthesis and is known to affect plant growth and development. 2. The amount of nitrogen moving through terrestrial ecosystems has increased in the recent past. While natural "background" levels of nitrogen fixation have remained constant, human additions to the system through fertilizer production and fossil fuel use have increased dramatically. Nitrogen is a key nutrient for plant growth and plays a critical role in plant community structure and composition in many environments. 3. Biodiversity levels are falling. While the research and data are not as complete as they are for CO2 and nitrogen, data indicate that the number of species globally, is being reduced. Perhaps more important for ecosystem function, diversity levels on local to regional scales have fallen due to land use change, biotic invasion and many other drivers. While much is known about how each of these factors affects ecosystem functioning, many questions remain. There is also little data on how these issues affect each other, and what emergent qualities may arise when systems are exposed to these changes simultaneously. BioCON seeks to address these issues with this multi-year study at Cedar Creek Ecosytem Science Preserve.
DOI: 10.6073/pasta/c3eaf35e30fc5ccbec4cae48192ea7b3
title: Root biomass data: BioCON : Biodiversity, Elevated CO2, and N Enrichment

description: BioCON (Biodiversity, CO2, and Nitrogen) is an ecological experiment started in 1997 at the University of Minnesota's Cedar Creek Ecosystem Science Reserve. BioCON's goal is to explore the ways in which plant communities will respond to three environmental changes that are known to be occurring on a global scale: increasing nitrogen deposition, increasing atmospheric CO2, and decreasing biodiversity. Why Biodiversity, CO2, and Nitrogen? While there are many uncertainties in global change biology, there are also some well documented facts. Some of these are: 1. The amount of carbon dioxide (CO2) in the atmosphere is rising. Since the industrial revolution, the CO2 concentration in the atmosphere has increased from approximately 275 parts per million (ppm) to about 378 ppm today. This has been largely the result of fossil fuel burning. It is expected that CO2 levels will continue to rise, and that by the year 2050 these levels will be approximately 550 ppm. CO2 is the raw material for photosynthesis and is known to affect plant growth and development. 2. The amount of nitrogen moving through terrestrial ecosystems has increased in the recent past. While natural "background" levels of nitrogen fixation have remained constant, human additions to the system through fertilizer production and fossil fuel use have increased dramatically. Nitrogen is a key nutrient for plant growth and plays a critical role in plant community structure and composition in many environments. 3. Biodiversity levels are falling. While the research and data are not as complete as they are for CO2 and nitrogen, data indicate that the number of species globally, is being reduced. Perhaps more important for ecosystem function, diversity levels on local to regional scales have fallen due to land use change, biotic invasion and many other drivers. While much is known about how each of these factors affects ecosystem functioning, many questions remain. There is also little data on how these issues affect each other, and what emergent qualities may arise when systems are exposed to these changes simultaneously. BioCON seeks to address these issues with this multi-year study at Cedar Creek Ecosytem Science Preserve.