cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21647093
title: Supplementary Material for: Generation of Self-Fertilizing Hermaphroditic Fish from Gonochoristic Fish, Medaka (<b><i>Oryzias latipes</i></b>)

description: <b><i>Introduction:</i></b> Hermaphroditism is a mode of reproduction involving an individual animal that possesses both a testis and an ovary either sequentially or simultaneously. The mechanism creating hermaphrodites remains unknown. Previously, we identified <i>foxl3</i> as the germline sex determination gene in a gonochoristic fish, medaka (<i>Oryzias latipes</i>). <i>foxl3</i> loss-of-function (<i>foxl3</i><sup><i>−/−</i></sup>) females produce functional sperm as well as eggs in the ovary. However, these two gametes are not self-fertilizing because of the histological separation of each gamete production. In this study, we attempted to generate self-fertilizing medaka from female medaka by modifying germline sex using <i>foxl3</i><sup>−/−</sup> mutants and by using exogenous androgen to induce partial sex reversal of somatic cells. <b><i>Methods:</i></b> <i>foxl3</i><sup>−/−</sup> XX females were treated with 11-ketotestosterone (11-KT), a potent teleost fish androgen, at the sexually mature stage for 30 days (90–120 dph). Then, the fish were kept under normal conditions until they were either being dissected or crossed with infertile males. <b><i>Results and Discussion:</i></b> We showed that the <i>foxl3</i><sup>−/−</sup> XX female medaka can be transformed into a self-fertilizing hermaphrodite by inducing the formation of a male-like structure with exogenous 11-KT. Self-fertilization occurs in either the ovarian cavity, the oviduct, or both where sperm is released from a tubule-like structure which is likely derived from germinal epithelium, suggesting that timely modification of 2 independent mechanisms, regulation of germline sex and partial sex reversal of somatic cells, are critical to change the reproduction mode. Our results will provide insights in developmental and evolutional occurrence of hermaphrodite vertebrates, facilitate an innovative technique to improve the efficient selection of fish with desirable traits, and contribute to the rescue of endangered species.
DOI: 10.17632/rwzhrm2yhd.1
title: Carbon emissions

description: Carbon emissions
DOI: 10.23721/105/1354082
title: RADB DDoS 2016 (01/21/2016 to 01/22/2016)

description: This is a volumetric DDoS attack that was based on the DNS protocol. The attack targeted Merit's RADb service.

 It occurred in two different phases. During the first phase, the service hosted at 198.108.0.0 (it appears as this IP in the anonymized logs)
was targeted. This attack is evident in the 2016-01-21 09:00-10:00 and 2016-01-21 15:00-16:00 time frames. In the second phase of the attack,
the service hosted on 207.75.112.0 was targeted. This phase happened on the 2016-01-22 13:00-14:00 time frame.
DOI: 10.25430/researchdata.cab.unipd.it.00000666
title: Exclusion tests in Unilateral Primary Aldosteronism (EU-PA) Study: A systematic review and meta‐analysis

description: Data were extracted following the PRISMA methodology form PubMed, EMBASE, Web of Science and Cochrane Library databases for the meta‐analysis.
DOI: 10.3886/e161621v1
title: Data and Code for: Rapid Dynamics of Top Wealth Shares and Self-Made Fortunes, and Overall Wealth Mobility: What is the Role of Family Firms?

description: This is the replication material for "Rapid Dynamics of Top Wealth Shares and Self-Made Fortunes, and Overall Wealth Mobility: What is the Role of Family Firms?". <br><br>Abstract: We derive an analytical link between the fast dynamics of inequality at the<br>top of the wealth distribution and the prevalence of newly created fortunes.<br>Specifically, in the context of a random growth model of wealth accumulation,<br>the shape of the top of the wealth distribution changes rapidly only if the pace<br>with which new fortunes are created is fast. Quantitatively, the decision of a<br>few families to bear a large amount of idiosyncratic risk in the form of family<br>firms is crucial in accounting for both the prevalence of new fortunes and the<br>dynamics of top wealth inequality.<br><br><br>
DOI: 10.5281/zenodo.1307252
title: Predictors Of Depression, Anxiety And Stress Indicators In A Cohort Of Women With Chronic Pelvic Pain Data Set

description: Data set for submission of paper 'Predictors of depression, anxiety and stress indicators in a cohort of women with chronic pelvic pain'
DOI: 10.5281/zenodo.7215590
title: Advanced monitoring of tailings dam performance - data and notebooks

description: Seismic data used to recreate figures in Ouellet et al. 2022 'Advanced monitoring of tailings dam performance using seismic noise and stress models'. Original analysis completed on undecimated (500Hz) seismic data. Uploaded seismic data (miniseed) files have been decimated to 50Hz due to file size constraints. See https://github.com/smouellet/dVsVs_tailingsmonitoring for the associated code and notebooks.
description: Research funded through a Mitacs Accelerate grant.
DOI: 10.6084/m9.figshare.11968119.v2
title: Inshore hagfish genes' peptide sequences .faa - Kuraku Lab

description: Non-embargoed inshore hagfih gene model oriented for gene-level analysis<br>
DOI: 10.6084/m9.figshare.21587496.v1
title: Dataset - polarization on beads

description: Data underlying the results presented in BOE # 474588, figure 2.
DOI: 10.5281/zenodo.6365047
title: Relationship-Based Threat Modeling: Evaluation Data

description: The full data sets used for the evaluation of our Relationship-Based Threat Modeling approach, as described in our recent submission to EnCyCriS 2022.<br> Stef Verreydt, Laurens Sion, Koen Yskout, and Wouter Joosen. 2022. Relationship-Based Threat Modeling. In The 3rd International Workshop on Engineering and Cybersecurity of Critical Systems (EnCyCriS’22 ), May 16, 2022, Pittsburgh, PA, USA. ACM, New York, NY, USA, 8 pages. https://doi.org/10.1145/ 3524489.3527303
DOI: 10.5281/zenodo.1203819
title: Vocalset: A Singing Voice Dataset

description: We present VocalSet, a singing voice dataset consisting of 10.1 hours of monophonic recorded audio of professional singers demonstrating both standard and extended vocal techniques on all 5 vowels. Existing singing voice datasets aim to capture a focused subset of singing voice characteristics, and generally consist of just a few singers. VocalSet contains recordings from 20 different singers (9 male, 11 female) and a range of voice types.  VocalSet aims to improve the state of existing singing voice datasets and singing voice research by capturing not only a range of vowels, but also a diverse set of voices on many different vocal techniques, sung in contexts of scales, arpeggios, long tones, and excerpts.

We have included two .txt files 'train_singers_technique.txt 'and 'test_singers_technique.txt' in which you will find a list of the singers we used to train and test our technique classifier on. 'DataSetVocalises.pdf' contains the sheet singers sang from in their recording sessions. 'readme-anon.txt' contains more information about the dataset, including the mapping from filename to singer voice type as well as more information on the vocalises that will help you map files to sheet music. Enjoy and please cite accordingly!
DOI: 10.5281/zenodo.7314534
title: A meta-analysis of pre-pregnancy maternal body mass index and placental DNA methylation identifies 27 CpG sites with implications for mother-child health

description: Higher maternal pre-pregnancy body mass index (ppBMI) is associated with increased neonatal morbidity, as well as with pregnancy complications and metabolic outcomes in offspring later in life. Placenta is a key organ in fetal development and has been proposed to act as a mediator between the mother and different health outcomes in children. The overall aim of the present work is to investigate the association of ppBMI with epigenome-wide placental DNA methylation (DNAm) in 10 studies from the PACE consortium, amounting to 2,631 mother-child pairs. We identify 27 CpG sites at which we observe placental DNAm variations of up to 2.0% per 10 ppBMI-unit. The CpGs that are differentially methylated in placenta do not overlap with CpGs identified in previous studies in cord blood DNAm related to ppBMI. Many of the identified CpGs are located in open sea regions, are often close to obesity-related genes such as GPX1 and LGR4 and altogether, are enriched in cancer and oxidative stress pathways. Our findings suggest that placental DNAm could be one of the mechanisms by which maternal obesity is associated with metabolic health outcomes in newborns and children, although further studies will be needed in order to corroborate these findings. File descriptions: ppBMI_placenta_unadjustedmodel_NFJ.csv = EWAS summary statistics for the EWAS of ppBMI using the unadjusted model ppBMI_placenta_adjustedmodel_NFJ.csv = EWAS summary statistics for the EWAS of ppBMI using the adjusted model Upload of this dataset was completed by The EWAS Catalog team. The data can be queried along with hundreds of other EWAS at ewascatalog.org. To upload your EWAS summary statistics and have a Zenodo DOI generated for you go to ewascatalog.org/upload.
DOI: 10.5517/ccdc.csd.cc242g6x
title: CCDC 1968568: Experimental Crystal Structure Determination

description: Related Article: Swiatoslaw Trofimenko, Glenn P. A. Yap|2019|CSD Communication|||
DOI: 10.3886/e150581v1
title: Replication Files for: Wage Cyclicality and Labor Market Sorting

description: This paper uses a measure of skill mismatch to separate wage flexibility from confounding variation in wages driven by differences in job quality over the business cycle. I first show that the high cyclicality of job switchers wages goes beyond cyclical movements in skill mismatch. Then, I uncover large differences in wage cyclicality across the skill mismatch distribution. Among incumbent workers, wages are acyclical in good matches but procyclical in poor matches, in particular for overqualified workers.
description: Men born during the years 1957 through 1964 and living in the United States when the survey began in 1979.<br>.
DOI: 10.5517/cc10qm9n
title: CCDC 945261: Experimental Crystal Structure Determination

description: Related Article: Claudio Pettinari, Brian W. Skelton, Allan H. White|2017|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2357p7
title: CCDC 1941458: Experimental Crystal Structure Determination

description: Related Article: Kerstin Kunz, Michael Bolte|2019|CSD Communication|||
DOI: 10.4121/20565381
title: Supplementary data of the paper: Steroid profiling in the amniotic fluid: reference range for 12 steroids and interest in 21-hydroxylase deficiency.

description: Contains supplemental data related to the paper "Steroid profiling in the amniotic fluid: reference range for 12 steroids and interest in 21-hydroxylase deficiency." published in JCEM.
DOI: 10.5683/sp2/jz77xa
title: Comprehensive Prediction of the SARS-CoV-2 vs. Human Interactome using PIPE4, SPRINT, and PIPE-Sites

description: Understanding the disease pathogenesis of the novel coronavirus, denoted SARS-CoV-2, is critical to the development of anti-SARS-CoV-2 therapeutics. To that end, we leverage two state-of-the-art, sequence-based PPI predictors (PIPE4 SPRINT) capable of generating the comprehensive SARS-CoV-2 vs. human interactome, comprising 285,124 pairwise predictions. Of these, we identify the conservative high-scoring subset of human proteins predicted to interact with each of the 14 SARS-CoV-2 proteins by both methods, comprising 279 high-confidence putative interactions involving 225 human proteins. Furthermore, the PIPE-Sites algorithm was used to predict the putative subsequence that might mediate each interaction and thereby inform the design of inhibitory polypeptide intended to disrupt the corresponding host-pathogen interactions, thereby acting as anti-SARS-CoV-2 therapeutics. The interaction landscape and three predicted sites of interaction for each of the 279 interactions are published here along with the predictions and their meta-data. All data and metadata are released under a CC-BY 4.0 license. The information provided is theoretical modeling only and caution should be exercised in its use. It is intended only as a resource for the scientific community at large in furthering our understanding of SARS-CoV-2.
DOI: 10.6084/m9.figshare.21275934.v1
title: Evaluation of Shape, Size and Location of a Mental Foramen in dentulous and edentulous among Saudi population Using 3D Cone-Beam Computed Tomography

description: Mental foramen (MF) and its accessories are the important anatomical considerations while placing implants or doing surgical procedures in and around the mandibular premolar region. This study aimed to evaluate the shape, size, and location of mental foramen in dentulous and edentulous patients among the Saudi population using 3D cone-beam computed tomography (CBCT).
DOI: 10.34740/kaggle/dsv/4629673
title: AutoXGB
DOI: 10.2905/7383638c-50cd-4a0e-964b-4b3891c4ac5a
title: The new electric SUV market under battery supply constraints: might they increase CO2 emissions?

description: Supplementary material for the paper
DOI: 10.17632/fj3rkswssy.1
title: IGC18013: Peer effects in maternal and child practices- A study in Bihar

description: The data set contain information on 2250 women aged 15-49 years. The data is about their socioeconomic characteristics, adoption of MCH practices,motivators, and on village level features. The survey was undertaken in January-March 2020 on 6 districts of Bihar. It was funded by the International Growth Center, UK and facilitated by the Bihar Rural Livelihoods Programme.
DOI: 10.17632/3frm3mnkpc.1
title: Supplemental material for MAPKs/AP-1, not NF-κB, is responsible for MCP-1 production in TNF-α-activated adipocytes

description: This study, for the first time, reveals that MAPKs/AP-1 but not NF-κB signaling is responsible for MCP-1 production in TNF-α-activated adipocytes. All of raw data are provided below, classified by each result (figure) in the manuscript.
DOI: 10.15468/dl.kmy4t5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query: { "and" : [ "DatasetKey is New Zealand Biodiversity Recording Network", "HasGeospatialIssue is false", "Country is New Zealand", "Modified is 2022-10" ] } The dataset includes 0 records from 0 constituent datasets:
DOI: 10.5281/zenodo.7385500
title: Integrative genetic analyses illuminates ALS heritability and identifies novel risk genes

description: Amyotrophic lateral sclerosis (ALS), the major adult onset motor neuron disease, has substantial heritability, in part shared with fronto-temporal dementia (FTD). We show here that ALS heritability is enriched in splicing variants and in binding sites of 6 RNA binding proteins including TDP-43 and FUS. A discovery and replication transcriptome wide association study (TWAS) identified 6 loci associated with ALS, 3 in known ALS loci (<em>C9ORF72, SCFD1, SLC9A8</em>) and 3 novel loci including <em>NUP50 </em>encoding for the nucleopore basket protein NUP50 In our meta-analysis of TWAS cohorts, <em>NUP50 </em>common variant was associated with ALS and to decreased expression of <em>NUP50 </em>in the central nervous system. Independently, we further show association of rare variants in <em>NUP50</em> with ALS risk (<em>P</em> = 3.71.10<sup>-03</sup>; odds ratio = 3.29; 95%CI, 1.37 to 7.87) in a cohort of 9,390 ALS/FTD patients and 4,594 controls. Cells from one patient carrying a <em>NUP50 </em>frameshift mutation displayed a decreased levels of NUP50. Loss of NUP50 leads to neuronal death in cultured neurons, and motor defects in <em>Drosophila </em>and zebrafish models. Thus, our study identifies alterations in splicing in neurons as a critical pathogenic process in ALS, uncovers several new loci potentially contributing to ALS, and provides genetic evidence linking nuclear pore defects to ALS.
DOI: 10.6084/m9.figshare.21353190
title: test gbif repository

description: Derived dataset of gbif use. Concatenation of 3xxxx DOI of dataset from GBIF database.
DOI: 10.17638/datacat.liverpool.ac.uk/1959
title: Thirring Model in 2+1 dimensions with Domain Wall Fermions

description: Program code and data required to reproduce the results presented in "Spectroscopy in the 2+1d Thirring Model with N=1 Domain Wall Fermions", arXiv:2210.04790 [hep-lat].
DOI: 10.48670/moi-00035
title: Global Ocean - In Situ reprocessed carbon observations - SOCATv2022 / GLODAPv2.2022
DOI: 10.48670/moi-00144
title: GLOBAL OCEAN GRIDDED NORMALIZED MEASUREMENT NOISE OF SEA LEVEL ANOMALIES
DOI: 10.5281/zenodo.7385507
title: Meteorological records OAL-UK

description: Meteorological records collected in Catterline, Scotland between July, 2021 and July, 2022. Records were collected with a meteorological station Davis Vantage Pro2 Integrated Sensor Suite.
DOI: 10.5281/zenodo.7385369
title: Robotic Monitoring of Grasslands: a Dataset on European Union Natura2000 habitat 6210

description: Data collected between the 10 and the 13 of May 2022, in Valsorda, Gualdo Tadino 06023 (PG), Italy, inside the Natura 2000 SAC IT5210014. The data acquisition has been conducted by a team composed of both robotic engineers and plant scientists. The platform used to collect the data is the ANYmal C quadrupedal robot. The dataset contains two different sets of data: <br> 1) typical and early warning species data - pictures and videos of two different typical species of the habitat 6210 and one early warning species.<br> 2) monitoring mission data - video of the monitoring mission, robot status and point clouds, pictures and videos taken by the robot during the autonomous surveys. This dataset has a multidisciplinary scope and can be used by researchers in several fields. For instance, point clouds and information about the robot state could be used by robotic engineers to test or validate their own methods as well as benchmark the robot performance. On the other hand, plant videos and images recorded by the robot could be used by botanists to assess the quality of this information as well as the habitat's conditions, or by computer scientists interested in testing their AI algorithms for species detection and classification.
description: This research is partially supported by the European Union's Horizon 2020 Research and Innovation Programme under Grant Agreement No. 101016970 (Natural Intelligence) and in part by the Ministry of University and Research (MUR) as part of the PON 2014-2021 "Research and Innovation" resources – Green Action - DM MUR 1062/2021.
DOI: 10.5281/zenodo.6319793
title: LoGov Switzerland Workshop Report n°2

description: The workshop has been realised in the framework of the H2020-MSCA-RISE-2018 project “LoGov - Local Government and the Changing Urban-Rural Interplay” as part of the implementation phase of the project. The workshops have been conducted with experts in the field of public administration, public law and political science, both researchers and practitioners, with the aim of widening the scope of the Country Report on Switzerland. To receive more information about the project, please visit: https://www.logov-rise.eu/. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 823961.
DOI: 10.5281/zenodo.6319794
title: LoGov Switzerland Workshop Report n°2

description: The workshop has been realised in the framework of the H2020-MSCA-RISE-2018 project “LoGov - Local Government and the Changing Urban-Rural Interplay” as part of the implementation phase of the project. The workshops have been conducted with experts in the field of public administration, public law and political science, both researchers and practitioners, with the aim of widening the scope of the Country Report on Switzerland. To receive more information about the project, please visit: https://www.logov-rise.eu/. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No 823961.
DOI: 10.5281/zenodo.7340838
title: InternVideo-VideoMAE-L verb features for Ego4D MQ

description: The video features for Ego4D Moment queries subset, containing training set, validation set and testing set. The features are extracted by VideoMAE-L pretrained on Ego4D-Verb subset.
DOI: 10.5281/zenodo.7380537
title: Monthly average profiles of Distributed Temperature Sensing at Thwaites Eastern Ice Shelf

description: Monthly average profiles of Distributed Temperature Sensing (DTS) for Thwaites Eastern Ice Shelf used in Dotto et al. (under review). The profiles are from April 2020, September 2020 and February 2021. DTS utilizes a fibre-optic cable installed within the ice and through the ocean, and it uses Raman backscattered photons to estimate the in situ temperature of the fiber (Hausner et al 2011). The DTS interrogators (Silixa XT-DTS, Silixa LLC. Elstree, UK) used a spatial sampling of 25 cm. Each DTS profile uses a 1-minute integration time to reduce signal to noise. Independent temperature measurements from the MicroCATs are employed to calibrate the backscatter signal (Tyler et al., 2013; Hausner et al 2011). Hausner, M. B., Suárez, F., Glander, K. E., van de Giesen, N., Selker, J. S. & Tyler, S. W. Calibrating single-ended fiber-optic Raman spectra distributed temperature sensing data. Sensors (Basel), 11(11), 10,859–10,879 (2011). Tyler, S. W., Holland, D. M., Zagorodnov, V., Stern, A. A., Sladek, C., Kobs, S., White, S., Suárez, F. & Bryenton, J. Using distributed temperature sensors to monitor an Antarctic ice shelf and sub-ice-shelf cavity. Journal of Glaciology, 59(215), 583–591 (2013). Dotto, T. S., Heywood, K., Hall, R. et al. Ocean variability beneath Thwaites Eastern Ice Shelf driven by the Pine Island Bay Gyre strength, 11 October 2022, PREPRINT (Version 1) available at Research Square [https://doi.org/10.21203/rs.3.rs-1466534/v1]
DOI: 10.21227/qy7j-cq11
title: Ear biting in pigs - a welfare challenge

description: Ear biting is a welfare challenge in commercial pig farming. Pigs sustain injuries at the site of bite paving the way for bacterial infections. Early detection and management of this behaviour is important to enhance animal health and welfare, increase productivity whilst minimising inputs from medication. Pig management using physical observation is not practical due to the scale of modern pig production systems. The same applies to the manual analysis of captured videos from pig houses. Therefore, a method of automated detection is desirable. We introduce an automatic  approach based on deep learning for the detection and quantification of ear biting episodes. The datasets described here are from experimental and commercial farms where the farmer previously reported ear biting.
DOI: 10.5281/zenodo.7343178
title: InternVideo-VideoMAE-L noun features for Ego4D NLQ

description: The video features for Ego4D <strong>Natural Language Queries</strong> subset, containing <strong>training </strong>set, <strong>validation </strong>set and <strong>testing </strong>set. The features are extracted by <strong>VideoMAE-L</strong> pretrained on <strong>Ego4D-Noun </strong>subset.
DOI: 10.34740/kaggle/dsv/4630501
title: Elon Musk Tweets
DOI: 10.5281/zenodo.7385628
title: Soil-water dynamics under stemflow and stemflow-free conditions

description: soil-water dynamics (i.e., volumetric soil moisture, matric suction, and soil temperature) time series (2018-2022) under stemflow and stemflow-free conditions. Data collected under 8 adult tree individuals of Sycamore and Ash growing on a slope in Catterline, Scotland
DOI: 10.34740/kaggle/dsv/4630511
title: YouTube Daily