cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.4021779.v1
title: 3) BryoMFC manuscript - Carbon-paper conductivity - Fig2j from Electrical output of bryophyte microbial fuel cell systems is sufficient to power a radio or an environmental sensor

description: Plant microbial fuel cells are a recently developed technology that exploits photosynthesis in vascular plants by harnessing solar energy and generating electrical power. In this study, the model moss species <i>Physcomitrella patens</i>, and other environmental samples of mosses, have been used to develop a non-vascular bryophyte microbial fuel cell (bryoMFC). A novel three-dimensional anodic matrix was successfully created and characterized and was further tested in a bryoMFC to determine the capacity of mosses to generate electrical power. The importance of anodophilic microorganisms in the bryoMFC was also determined. It was found that the non-sterile bryoMFCs operated with <i>P. patens</i> delivered over an order of magnitude higher peak power output (2.6 ± 0.6 µW m<sup>−2</sup>) than bryoMFCs kept in near-sterile conditions (0.2 ± 0.1 µW m<sup>−2</sup>). These results confirm the importance of the microbial populations for delivering electrons to the anode in a bryoMFC. When the bryoMFCs were operated with environmental samples of moss (non-sterile) the peak power output reached 6.7 ± 0.6 mW m<sup>−2</sup>. The bryoMFCs operated with environmental samples of moss were able to power a commercial radio receiver or an environmental sensor (LCD desktop weather station).
DOI: 10.7910/dvn/v1rjpf/bkinhe
title: ykc20170702_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/lmxs2e
title: ykc20160410_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4021752
title: fluTwitterData.csv: Data file containing weekly ILI and tweet counts from A data-driven model for influenza transmission incorporating media effects

description: Numerous studies have attempted to model the effect of mass media on the transmission of diseases such as influenza, however, quantitative data on media engagement has until recently been difficult to obtain. With the recent explosion of ‘big data’ coming from online social media and the like, large volumes of data on a population’s engagement with mass media during an epidemic are becoming available to researchers. In this study, we combine an online dataset comprising millions of shared messages relating to influenza with traditional surveillance data on flu activity to suggest a functional form for the relationship between the two. Using this data, we present a simple deterministic model for influenza dynamics incorporating media effects, and show that such a model helps explain the dynamics of historical influenza outbreaks. Furthermore, through model selection we show that the proposed media function fits historical data better than other media functions proposed in earlier studies.
DOI: 10.7910/dvn/v1rjpf/5yjhay
title: ykc20160315_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4021749
title: Supplementary material from "Electrical output of bryophyte microbial fuel cell systems is sufficient to power a radio or an environmental sensor"

description: Plant microbial fuel cells are a recently developed technology that exploits photosynthesis in vascular plants by harnessing solar energy and generating electrical power. In this study, the model moss species <i>Physcomitrella patens</i>, and other environmental samples of mosses, have been used to develop a non-vascular bryophyte microbial fuel cell (bryoMFC). A novel three-dimensional anodic matrix was successfully created and characterized and was further tested in a bryoMFC to determine the capacity of mosses to generate electrical power. The importance of anodophilic microorganisms in the bryoMFC was also determined. It was found that the non-sterile bryoMFCs operated with <i>P. patens</i> delivered over an order of magnitude higher peak power output (2.6 ± 0.6 µW m<sup>-2</sup>) than bryoMFCs kept in near-sterile conditions (0.2 ± 0.1 µW m<sup>-2</sup>). These results confirm the importance of the microbial populations for delivering electrons to the anode in a bryoMFC. When the bryoMFCs were operated with environmental samples of moss (non-sterile) the peak power output reached 6.7 ± 0.6 mW m<sup>-2</sup>. The bryoMFCs operated with environmental samples of moss were able to power a commercial radio receiver or an environmental sensor (LCD desktop weather station).
DOI: 10.6084/m9.figshare.4021752.v1
title: fluTwitterData.csv: Data file containing weekly ILI and tweet counts from A data-driven model for influenza transmission incorporating media effects

description: Numerous studies have attempted to model the effect of mass media on the transmission of diseases such as influenza, however, quantitative data on media engagement has until recently been difficult to obtain. With the recent explosion of ‘big data’ coming from online social media and the like, large volumes of data on a population’s engagement with mass media during an epidemic are becoming available to researchers. In this study, we combine an online dataset comprising millions of shared messages relating to influenza with traditional surveillance data on flu activity to suggest a functional form for the relationship between the two. Using this data, we present a simple deterministic model for influenza dynamics incorporating media effects, and show that such a model helps explain the dynamics of historical influenza outbreaks. Furthermore, through model selection we show that the proposed media function fits historical data better than other media functions proposed in earlier studies.
DOI: 10.7910/dvn/v1rjpf/or17xn
title: ykc20171009_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4021749.v2
title: Supplementary material from "Electrical output of bryophyte microbial fuel cell systems is sufficient to power a radio or an environmental sensor"

description: Plant microbial fuel cells are a recently developed technology that exploits photosynthesis in vascular plants by harnessing solar energy and generating electrical power. In this study, the model moss species <i>Physcomitrella patens</i>, and other environmental samples of mosses, have been used to develop a non-vascular bryophyte microbial fuel cell (bryoMFC). A novel three-dimensional anodic matrix was successfully created and characterized and was further tested in a bryoMFC to determine the capacity of mosses to generate electrical power. The importance of anodophilic microorganisms in the bryoMFC was also determined. It was found that the non-sterile bryoMFCs operated with <i>P. patens</i> delivered over an order of magnitude higher peak power output (2.6 ± 0.6 µW m<sup>-2</sup>) than bryoMFCs kept in near-sterile conditions (0.2 ± 0.1 µW m<sup>-2</sup>). These results confirm the importance of the microbial populations for delivering electrons to the anode in a bryoMFC. When the bryoMFCs were operated with environmental samples of moss (non-sterile) the peak power output reached 6.7 ± 0.6 mW m<sup>-2</sup>. The bryoMFCs operated with environmental samples of moss were able to power a commercial radio receiver or an environmental sensor (LCD desktop weather station).
DOI: 10.7910/dvn/v1rjpf/iejoso
title: ykc20160316_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4021749.v1
title: 11) BryoMFC manuscript - Power over time - Fig5 from Electrical output of bryophyte microbial fuel cell systems is sufficient to power a radio or an environmental sensor

description: Plant microbial fuel cells are a recently developed technology that exploits photosynthesis in vascular plants by harnessing solar energy and generating electrical power. In this study, the model moss species <i>Physcomitrella patens</i>, and other environmental samples of mosses, have been used to develop a non-vascular bryophyte microbial fuel cell (bryoMFC). A novel three-dimensional anodic matrix was successfully created and characterized and was further tested in a bryoMFC to determine the capacity of mosses to generate electrical power. The importance of anodophilic microorganisms in the bryoMFC was also determined. It was found that the non-sterile bryoMFCs operated with <i>P. patens</i> delivered over an order of magnitude higher peak power output (2.6 ± 0.6 µW m<sup>−2</sup>) than bryoMFCs kept in near-sterile conditions (0.2 ± 0.1 µW m<sup>−2</sup>). These results confirm the importance of the microbial populations for delivering electrons to the anode in a bryoMFC. When the bryoMFCs were operated with environmental samples of moss (non-sterile) the peak power output reached 6.7 ± 0.6 mW m<sup>−2</sup>. The bryoMFCs operated with environmental samples of moss were able to power a commercial radio receiver or an environmental sensor (LCD desktop weather station).
DOI: 10.7910/dvn/v1rjpf/l6meoq
title: ykc20161218_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4021542
title: Supplementary Material for: Effect of Fluoride-Containing Toothpastes on Enamel Demineralization and Streptococcus mutans Biofilm Architecture

description: This study aimed to explore the effect of fluoridated toothpastes on biofilm architecture and enamel demineralization in an in vitro biofilm model. <i>Streptococcus mutans</i> was grown on enamel and treated with slurries of commercial toothpastes, containing SnF<sub>2</sub> or NaF. Water and chlorhexidine were used as negative and positive controls, respectively. The developed biofilms were imaged and enamel demineralization was measured. SnF<sub>2</sub> and NaF toothpaste treatments significantly reduced enamel demineralization, but SnF<sub>2</sub> toothpaste was more effective. Only SnF<sub>2</sub> toothpaste and chlorhexidine treatments caused reductions on biofilm mass and thickness. In conclusion, this biofilm model was able to differentiate the effects of the SnF<sub>2</sub> and NaF toothpastes on biofilm architecture and enamel demineralization.
DOI: 10.7910/dvn/v1rjpf/yrsx3n
title: ykc20160824_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4021080
title: Supplementary Material for: Mutational Profile of 10 Afflicted Egyptian Families with 17-β-HSD-3 Deficiency

description: This study aimed at the detection of <i>HSD17B3</i> gene mutations in Egyptian patients with suspected diagnosis of 46,XY DSD due to 17-β-HSD-3 deficiency and at evaluation of phenotype/genotype relationship of these mutations. The study was conducted on 11 patients of 10 families which were provisionally diagnosed to have 17-β-HSD-3 enzyme deficiency. Karyotyping, hormonal evaluation of testosterone, Δ4-androstenedione, and dihydrotestosterone, and sequencing analysis of the 11 exons of the <i>HSD17B3</i> gene were done. Mutations in <i>HSD17B3</i> were detected in exons 2, 7, 8, 10, and 11, and 6 novel mutations were determined in exons 1, 2, 7, and 8. Two patients showed compound heterozygous mutations, while 8 families had probands with homozygous mutations. The current study shows that 17-β-HSD-3 deficiency is not an uncommon disorder among Egyptian DSD cases. It was evidenced that the mutational profile of the disease is rather heterogeneous, relatively different from those reported in other populations, and has a high degree of novel genetic defects.
DOI: 10.7910/dvn/v1rjpf/u8oe0h
title: ykc20170821_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4020852
title: Map cluster colors_1950s_FramingPsychology

description: Framing Psychology article map cluster colors (1950s)
DOI: 10.6084/m9.figshare.4021080.v1
title: Supplementary Material for: Mutational Profile of 10 Afflicted Egyptian Families with 17-β-HSD-3 Deficiency

description: This study aimed at the detection of <i>HSD17B3</i> gene mutations in Egyptian patients with suspected diagnosis of 46,XY DSD due to 17-β-HSD-3 deficiency and at evaluation of phenotype/genotype relationship of these mutations. The study was conducted on 11 patients of 10 families which were provisionally diagnosed to have 17-β-HSD-3 enzyme deficiency. Karyotyping, hormonal evaluation of testosterone, Δ4-androstenedione, and dihydrotestosterone, and sequencing analysis of the 11 exons of the <i>HSD17B3</i> gene were done. Mutations in <i>HSD17B3</i> were detected in exons 2, 7, 8, 10, and 11, and 6 novel mutations were determined in exons 1, 2, 7, and 8. Two patients showed compound heterozygous mutations, while 8 families had probands with homozygous mutations. The current study shows that 17-β-HSD-3 deficiency is not an uncommon disorder among Egyptian DSD cases. It was evidenced that the mutational profile of the disease is rather heterogeneous, relatively different from those reported in other populations, and has a high degree of novel genetic defects.
DOI: 10.7910/dvn/v1rjpf/44jzap
title: ykc20170405_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4020159
title: Map cluster colors_1960s_FramingPsychology

description: Framing Psychology article map cluster colors (1960s)
DOI: 10.7910/dvn/v1rjpf/f8o9m2
title: ykc20160102_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/gjlr6s
title: ykc20170506_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4019358
title: 1990-1999_network

description: Framing Psychology article network file for 1990s.
DOI: 10.7910/dvn/v1rjpf/wpldoy
title: ykc20171215_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4019304
title: 1980-1989_network

description: Framing Psychology article network (1980s).
DOI: 10.7910/dvn/v1rjpf/nkjf0k
title: ykc20171212_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4019328
title: 1990-1999_map

description: Framing Psychology article map (1990s).
DOI: 10.7910/dvn/v1rjpf/pacjfw
title: ykc20161204_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4019328.v1
title: 1990-1999_map

description: Framing Psychology article map (1990s).
DOI: 10.6084/m9.figshare.4019268
title: 1980-1989_map

description: Framing Psychology article map (1980s).
DOI: 10.6084/m9.figshare.4019268.v1
title: 1980-1989_map

description: Framing Psychology article map (1980s).
DOI: 10.7910/dvn/v1rjpf/33rxlz
title: ykc20160321_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4019184
title: 1970-1979_map

description: Framing Psychology article map (1970s).
DOI: 10.6084/m9.figshare.4019229
title: 1970-1979_network

description: Framing Psychology article network (1970s).
DOI: 10.6084/m9.figshare.4019184.v1
title: 1970-1979_map

description: Framing Psychology article map (1970s).
DOI: 10.7910/dvn/v1rjpf/ib5z1v
title: ykc20170301_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4019139
title: 1960-1969_network

description: Framing Psychology article network (1960s).
DOI: 10.7910/dvn/v1rjpf/0ci7mo
title: ykc20160106_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4019088
title: 1960-1969_map

description: Framing Psychology article map (1960s).
DOI: 10.7910/dvn/v1rjpf/dimdsn
title: ykc20171218_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4016490
title: Supplementary Material for: Dissecting Aortic Aneurysm 55 Years after Diagnosis of Iris Flocculi

description: <b><i>Purpose:</i></b> The aim of this study is to report the clinical features, imaging studies, surgical removal, and pathology of congenital iris flocculi in a patient who developed a life-threatening dissecting aortic aneurysm after 55 years of follow-up. <b><i>Methods:</i></b> Documentation with iris photography was performed from age 18 to 55 years, at which time anterior segment optical coherence tomography (OCT) was performed. At the time of subsequent cataract surgery, the iris flocculi were removed in each eye and submitted for light and electron microscopy. <b><i>Results:</i></b> The size and shape of the iris flocculi waxed and waned over the years but caused no visual disturbance. Anterior segment OCT demonstrated clear, round cysts with thin lining and no solid component. At the age of 55, congestive heart failure from a dissecting aortic aneurysm was discovered and surgically repaired. Subsequent bilateral cataract surgery and cyst removal were performed, and the iris flocculi were studied with light and electron microscopy. <b><i>Conclusions:</i></b> Congenital iris flocculi cause little, if any, visual impairment in most cases. However, they are occasionally associated with dissecting aortic aneurysm due to a shared mutation in smooth muscle that affects both the iris and the aorta. Patients with iris flocculi should be monitored periodically for aortic abnormalities.
DOI: 10.7910/dvn/v1rjpf/znznux
title: ykc20161221_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/3rolix
title: ykc20161219_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/73a5s3
title: ykc20170823_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4015824.v2
title: 'Hepitopes': A Database of HLA Class I Epitopes in Hepatitis B Virus

description: This is a spreadsheet containing the results of a systematic literature review to identify and curate all known and putative HLA Class I epitopes in hepatitis B virus (HBV). We performed our literature review in January 2016, searching Medline and Embase via the OVID search interface made available by the University of Oxford. No date restrictions were imposed; Medline was searched from 1946-2016 and Embase from 1974-2016. The relevant subject headings for Epitopes, HLA Antigens, CD8 Antigens and Hepatitis B from the thesauri (MESH and EMTREE) were exploded and searched. In addition the terms epitope* (to pick up singular and plural) and Hepatitis B and HBV were searched in the title and abstract fields. We also identified additional references by searching the bibliographies of relevant articles. As well as details of each citation, we recorded the HBV protein and sequence-numbered location of each epitope (based on a published reference strain; Liu WC, et al. Aligning to the sample-specific reference sequence to optimize the accuracy of next-generation sequencing analysis for hepatitis B virus. <i>Hepatol Int</i> 2016;10:147-157). Each citation was reviewed by a primary reviewer and then again by a second expert to ensure the records are as accurate as possible. Over time, we aim to update and refine the dataset such that it becomes a growing resource for virologists, immunologists and those in the field of vaccine design.A live interactive version can be viewed at http://www.expmedndm.ox.ac.uk/hepitopes.The visualisation code can be viewed at https://github.com/ox-it/hepitopes. As the database is updated and refined, we will submit updated versions to Figshare. In parallel, we have uploaded a static version to Oxford Research Archive (ORA) at the point of initial publication; DOI: 10.5287/bodleian:zr0VAr78q
DOI: 10.7910/dvn/v1rjpf/9yksnp
title: ykc20170331_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4015737
title: measurements

description: data of my study in measurements of tibial plateau at the surface level and the resected level
DOI: 10.7910/dvn/v1rjpf/ccjxaa
title: ykc20170923_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4015737.v1
title: measurements

description: data of my study in measurements of tibial plateau at the surface level and the resected level
DOI: 10.7910/dvn/v1rjpf/s09zhw
title: ykc20160512_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/dw6rsg
title: ykc20161002_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/yk2ptl
title: ykc20170119_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/tfwf8r
title: ykc20170913_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/btxmbq
title: ykc20171124_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/qemdvv
title: ykc20170116_03.txt.gz

description: :unav
DOI: 10.17028/rd.lboro.4012833
title: Copper zinc oxide: Investigation into a P-type mixed metal oxide system (data files)

description: Transmission, X-ray diffraction, band gap, composition and resistivity data for the copper-zinc oxide alloy system. Experimental techniques are described in the published journal article, which can be found at dx.doi.org/10.1016/j.vacuum.2016.09.026.<br>
DOI: 10.7910/dvn/v1rjpf/ppivab
title: ykc20171209_03.txt.gz

description: :unav
DOI: 10.17028/rd.lboro.4012833.v1
title: Copper zinc oxide: Investigation into a P-type mixed metal oxide system (data files)

description: Transmission, X-ray diffraction, band gap, composition and resistivity data for the copper-zinc oxide alloy system. Experimental techniques are described in the published journal article, which can be found at dx.doi.org/10.1016/j.vacuum.2016.09.026.<br>
DOI: 10.7910/dvn/v1rjpf/pmy7gs
title: ykc20160411_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4012782
title: DTF Measurements

description: Measurements of tranposition qualities and runtime behavior of the heuristicial accelerated MDS-technique Dimensional Transposition Framework (DTF)<br>
DOI: 10.7910/dvn/v1rjpf/tb6szp
title: ykc20160920_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4012779.v1
title: Survey of Project Characteristics in Software Engineering-DATASET

description: Survey of Project Characteristics in Software Engineering-DATASET
DOI: 10.6084/m9.figshare.4012782.v2
title: DTF Measurements

description: Measurements of tranposition qualities and runtime behavior of the heuristicial accelerated MDS-technique Dimensional Transposition Framework (DTF)<br>
DOI: 10.7910/dvn/v1rjpf/60wzjc
title: ykc20160826_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4012782.v1
title: DTF Measurements

description: Measurements of tranposition qualities and runtime behavior of the heuristicial accelerated MDS-technique Dimensional Transposition Framework (DTF)<br>
DOI: 10.7910/dvn/v1rjpf/uslfks
title: ykc20170319_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/8wfswl
title: ykc20170922_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/nlg9ie
title: ykc20170303_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/oyxmfi
title: ykc20170207_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4012737
title: In vivo adaptive optics in the hippocampus

description: In vivo and in vitro XYZ images (400x400x40µm) of the CA1 layer of the hippocampus with (FullAO) and without (No AO) adaptive optics. All neurons are labeled with GCamP6 for in vivo images. Only GAD neurons are labeled with GFP for in vitro images.
DOI: 10.7910/dvn/v1rjpf/gd9ky5
title: ykc20160424_03.txt.gz

description: :unav
DOI: 10.7910/dvn/v1rjpf/iszhde
title: ykc20170911_03.txt.gz

description: :unav
DOI: 10.6084/m9.figshare.4012731
title: Molecular recognition of nitrogen – containing bases by Zn[5,15-bis-(2,6-dodecyloxyphenyl)]porphyrin

description: By means of spectrophotometric titration and <sup>1</sup>H NMR spectroscopy, the selective binding ability of the Zn-5,15-bis-(2,6-dodecyloxyphenyl)porphyrin towards nitrogen containing organic molecules of various nature has been studied. It has been found that the presence of long alkoxy substituents at the <i>ortho</i>-positions of the Zn-porphyrin phenyl rings prevents the axial coordination of tertiary amines and, conversely, creates favourable conditions for binding of a primary diamine due to the presence of additional binding sites, namely the oxygen atoms of the <i>ortho</i>–<i>ortho</i>′- dodecyloxy substituents of the meso phenyl groups. The formation of stable complexes with multiple binding sites has been confirmed by DFT quantum chemical calculations and two-dimensional NMR experiments.
DOI: 10.6084/m9.figshare.4012731.v1
title: Molecular recognition of nitrogen – containing bases by Zn[5,15-bis-(2,6-dodecyloxyphenyl)]porphyrin

description: By means of spectrophotometric titration and <sup>1</sup>H NMR spectroscopy, the selective binding ability of the Zn-5,15-bis-(2,6-dodecyloxyphenyl)porphyrin towards nitrogen containing organic molecules of various nature has been studied. It has been found that the presence of long alkoxy substituents at the <i>ortho</i>-positions of the Zn-porphyrin phenyl rings prevents the axial coordination of tertiary amines and, conversely, creates favourable conditions for binding of a primary diamine due to the presence of additional binding sites, namely the oxygen atoms of the <i>ortho</i>–<i>ortho</i>′- dodecyloxy substituents of the meso phenyl groups. The formation of stable complexes with multiple binding sites has been confirmed by DFT quantum chemical calculations and two-dimensional NMR experiments.