cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wnxqys
title: Occurrence Download

description: A dataset containing 93 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Year 2000-2019",
 {
 "or" : [
 "TaxonKey is Sceloporus megalepidurus Smith, 1934",
 "TaxonKey is Sceloporus jalapae Günther, 1890"
 ]
 }
 ]
}

 The dataset includes 93 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005286-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ksdgj
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anaphalis tenuicaulis Boriss."
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010704-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pvq2wz
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-5.6555 41.16549,-5.62908 41.15999,-5.62718 41.13357,-5.61048 41.12025,-5.55214 41.13167,-5.53734 41.14308,-5.52656 41.16676,-5.51514 41.19254,-5.52677 41.2308,-5.55002 41.23715,-5.58992 41.24701,-5.6492 41.24281,-5.67964 41.2147,-5.66813 41.16794,-5.6555 41.16549))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 59 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042626-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xkhbk5
title: Occurrence Download

description: A dataset containing 9610 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Andigena hypoglauca (Gould, 1833)"
 ]
}

 The dataset includes 9610 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021171-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6cgdk4
title: Occurrence Download

description: A dataset containing 672 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Mexico",
 "Country is South Africa"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Eragrostis lehmanniana Nees",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 672 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005270-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v8rbkb
title: Occurrence Download

description: A dataset containing 1055 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erica caffra L."
 ]
}

 The dataset includes 1055 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042701-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m4bbea
title: Occurrence Download

description: A dataset containing 1146 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fimbristylis nutans (Retz.) Vahl"
 ]
}

 The dataset includes 1146 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000681-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pvp9cs
title: Occurrence Download

description: A dataset containing 1181 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ceiba speciosa (A.St.-Hil., A.Juss. & Cambess.) Ravenna"
 ]
}

 The dataset includes 1181 records from 159 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005292-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ksn225
title: Occurrence Download

description: A dataset containing 420 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elatostema sessile J.R.Forst. & G.Forst."
 ]
}

 The dataset includes 420 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042722-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.avagsz
title: Occurrence Download

description: A dataset containing 1692 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is Germany",
 "DecimalLongitude is greater than or equal to 6.66487338112704",
 "DecimalLongitude is less than 6.66793293431144",
 "DecimalLatitude is greater than or equal to 47.27011",
 "DecimalLatitude is less than or equal to 55.05864"
 ]
}

 The dataset includes 1692 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003277-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rl6gkb
title: Occurrence Download

description: A dataset containing 169 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus resinosa Liebm."
 ]
}

 The dataset includes 169 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009616-160118175350007/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xdxtqm
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eriocaulon pulvinatum P.Royen"
 ]
}

 The dataset includes 26 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042682-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wveznu
title: Occurrence Download

description: A dataset containing 457991 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus robur L."
 ]
}

 The dataset includes 457991 records from 818 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009616-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9swtwj
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alyssum mouradicum Boiss. & Balansa"
 ]
}

 The dataset includes 43 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003255-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bkprz4
title: Occurrence Download

description: A dataset containing 491 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erica caffrorum Bolus"
 ]
}

 The dataset includes 491 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042706-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2uv3j9
title: Occurrence Download

description: A dataset containing 1884 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Argentina",
 "Country is Brazil",
 "Country is Chile",
 "Country is Colombia",
 "Country is Ecuador",
 "Country is Bolivia (Plurinational State of)",
 "Country is Paraguay",
 "Country is Venezuela (Bolivarian Republic of)",
 "Country is Peru",
 "Country is Uruguay",
 "Country is Guyana",
 "Country is Suriname"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Puma concolor (Linnaeus, 1771)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1884 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005296-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.krfydq
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Alyssum misirdalianum Orcan & Binzet"
 ]
}

 The dataset includes 3 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003224-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.an5fy6
title: Occurrence Download

description: A dataset containing 637 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erythrina subumbrans (Hassk.) Merr."
 ]
}

 The dataset includes 637 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042764-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rnxexl
title: Occurrence Download

description: A dataset listing the 278 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-106.62437 29.05617,-106.38405 29.05857,-106.39091 29.23249,-106.62918 29.22649,-106.62437 29.05617))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 278 records were derived from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005314-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7jhk3m
title: Occurrence Download

description: A dataset containing 21398 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boissonneaua jardini (Bourcier, 1851)"
 ]
}

 The dataset includes 21398 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003257-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26629252.v1
title: Additional file 7 of Dual spatially resolved transcriptomics for human host–pathogen colocalization studies in FFPE tissue sections

description: Additional file 7: Table S7. Differentially expressed genes in COVID-19 vs. control sections. Differentially expressed (DE) genes for COVID-19 versus control lung tissue samples. Differential expression analysis used Wilcoxon rank sum test and “bimod” Likelihood-ratio tests, p-value &lt; 0.05.
DOI: 10.6084/m9.figshare.26629252
title: Additional file 7 of Dual spatially resolved transcriptomics for human host–pathogen colocalization studies in FFPE tissue sections

description: Additional file 7: Table S7. Differentially expressed genes in COVID-19 vs. control sections. Differentially expressed (DE) genes for COVID-19 versus control lung tissue samples. Differential expression analysis used Wilcoxon rank sum test and “bimod” Likelihood-ratio tests, p-value &lt; 0.05.
DOI: 10.15468/dl.r3ccx4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.228016 -33.925572, 148.228016 -33.930063, 148.230262 -33.930063, 148.230262 -33.925572, 148.228016 -33.925572)), ((148.230262 -33.930063, 148.230262 -33.932309, 148.234754 -33.932309, 148.234754 -33.930063, 148.230262 -33.930063)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069965-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.24546952
title: Additional file 1 of ATACAmp: a tool for detecting ecDNA/HSRs from bulk and single-cell ATAC-seq data

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.24546952.v1
title: Additional file 1 of ATACAmp: a tool for detecting ecDNA/HSRs from bulk and single-cell ATAC-seq data

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.24547077
title: Additional file 2 of ATACAmp: a tool for detecting ecDNA/HSRs from bulk and single-cell ATAC-seq data

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.24547077.v1
title: Additional file 2 of ATACAmp: a tool for detecting ecDNA/HSRs from bulk and single-cell ATAC-seq data

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26638536
title: Additional file 3 of ATACAmp: a tool for detecting ecDNA/HSRs from bulk and single-cell ATAC-seq data

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26638536.v1
title: Additional file 3 of ATACAmp: a tool for detecting ecDNA/HSRs from bulk and single-cell ATAC-seq data

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.24547028
title: Additional file 1 of A pathway activity-based proteomic classifier stratifies prostate tumors into two subtypes

description: Additional file 1: Table S1. Information of patients and samples. Table S2. The differentially expressed analysis of PCa. Table S3. The proteomic pathway-based classification for PCa.
DOI: 10.6084/m9.figshare.24547028.v1
title: Additional file 1 of A pathway activity-based proteomic classifier stratifies prostate tumors into two subtypes

description: Additional file 1: Table S1. Information of patients and samples. Table S2. The differentially expressed analysis of PCa. Table S3. The proteomic pathway-based classification for PCa.
DOI: 10.6084/m9.figshare.26629255
title: Additional file 8 of Dual spatially resolved transcriptomics for human host–pathogen colocalization studies in FFPE tissue sections

description: Additional file 8: Table S8. Differentially expressed genes in COVID-19 vs. control per cluster. DE genes per cluster for COVID-19 versus control lung tissue samples. Differential expression analysis used Wilcoxon rank sum test and “bimod” Likelihood-ratio tests, p-value &lt; 0.05.
DOI: 10.6084/m9.figshare.26629258.v1
title: Additional file 9 of Dual spatially resolved transcriptomics for human host–pathogen colocalization studies in FFPE tissue sections

description: Additional file 9: Table S9. Colocalization analysis results of COVID-19 sections. Differentially expressed genes in SARS-CoV-2+ vs. SARS-CoV-2- spots in COVID-19 sections. Differential expression analysis between SARS-CoV-2+ and SARS-CoV-2- spots in COVID-19 sections overall used Wilcoxon rank sum test and DESeq2 negative binomial distribution tests, p-value &lt; 0.05.
DOI: 10.6084/m9.figshare.26629258
title: Additional file 9 of Dual spatially resolved transcriptomics for human host–pathogen colocalization studies in FFPE tissue sections

description: Additional file 9: Table S9. Colocalization analysis results of COVID-19 sections. Differentially expressed genes in SARS-CoV-2+ vs. SARS-CoV-2- spots in COVID-19 sections. Differential expression analysis between SARS-CoV-2+ and SARS-CoV-2- spots in COVID-19 sections overall used Wilcoxon rank sum test and DESeq2 negative binomial distribution tests, p-value &lt; 0.05.
DOI: 10.15468/dl.jfrdh4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.250474 -33.923326, 148.250474 -33.925572, 148.245983 -33.925572, 148.245983 -33.930063, 148.254966 -33.930063, 148.254966 -33.923326, 148.250474 -33.923326))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069966-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.24548165
title: Additional file 1 of Mosquito larvae exposed to a sublethal dose of photosensitive insecticides have altered juvenile development but unaffected adult life history traits

description: Additional file 1: Data. Datasets collected for this manuscript.
DOI: 10.6084/m9.figshare.24548165.v1
title: Additional file 1 of Mosquito larvae exposed to a sublethal dose of photosensitive insecticides have altered juvenile development but unaffected adult life history traits

description: Additional file 1: Data. Datasets collected for this manuscript.
DOI: 10.6084/m9.figshare.24355149.v1
title: Additional file 2 of Estimated indirect costs of haemodialysis versus peritoneal dialysis from a patients’ perspective at an Academic Hospital in Pretoria, South Africa

description: Additional file 2.
DOI: 10.15468/dl.4h29dm
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Cryptosepalum diphyllum P.A.Duvign.)"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069967-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10864503
title: Moisture data - Giora Kidron
DOI: 10.15468/dl.xrm94s
title: Occurrence Download

description: A dataset containing 531 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.544674 -33.923326, 148.551412 -33.923326, 148.551412 -33.918834, 148.553657 -33.918834, 148.553657 -33.916588, 148.549166 -33.916588, 148.549166 -33.909851, 148.544674 -33.909851, 148.544674 -33.923326)), ((148.544674 -33.923326, 148.540183 -33.923326, 148.540183 -33.930063, 148.544674 -33.930063, 148.544674 -33.923326)), ((148.553657 -33.916588, 148.560395 -33.916588, 148.560395 -33.918834, 148.564886 -33.918834, 148.564886 -33.916588, 148.567132 -33.916588, 148.567132 -33.918834, 148.569378 -33.918834, 148.569378 -33.916588, 148.573869 -33.916588, 148.573869 -33.903114, 148.580607 -33.903114, 148.580607 -33.900868, 148.587344 -33.900868, 148.587344 -33.898622, 148.573869 -33.898622, 148.573869 -33.900868, 148.569378 -33.900868, 148.569378 -33.903114, 148.564886 -33.903114, 148.564886 -33.907605, 148.567132 -33.907605, 148.567132 -33.914343, 148.553657 -33.914343, 148.553657 -33.916588)), ((148.573869 -33.916588, 148.573869 -33.918834, 148.576115 -33.918834, 148.576115 -33.916588, 148.573869 -33.916588)), ((148.573869 -33.918834, 148.569378 -33.918834, 148.569378 -33.923326, 148.573869 -33.923326, 148.573869 -33.918834)), ((148.573869 -33.923326, 148.573869 -33.925572, 148.576115 -33.925572, 148.576115 -33.932309, 148.580607 -33.932309, 148.580607 -33.936801, 148.582853 -33.936801, 148.582853 -33.939046, 148.585098 -33.939046, 148.585098 -33.936801, 148.587344 -33.936801, 148.587344 -33.930063, 148.58959 -33.930063, 148.58959 -33.925572, 148.587344 -33.925572, 148.587344 -33.923326, 148.591836 -33.923326, 148.591836 -33.932309, 148.594082 -33.932309, 148.594082 -33.930063, 148.598573 -33.930063, 148.598573 -33.92108, 148.603065 -33.92108, 148.603065 -33.909851, 148.596327 -33.909851, 148.596327 -33.918834, 148.587344 -33.918834, 148.587344 -33.914343, 148.58959 -33.914343, 148.58959 -33.909851, 148.576115 -33.909851, 148.576115 -33.914343, 148.580607 -33.914343, 148.580607 -33.923326, 148.573869 -33.923326)), ((148.573869 -33.925572, 148.569378 -33.925572, 148.569378 -33.923326, 148.567132 -33.923326, 148.567132 -33.925572, 148.560395 -33.925572, 148.560395 -33.930063, 148.567132 -33.930063, 148.567132 -33.932309, 148.573869 -33.932309, 148.573869 -33.925572)), ((148.560395 -33.918834, 148.558149 -33.918834, 148.558149 -33.923326, 148.560395 -33.923326, 148.560395 -33.918834)))"
 ]
}

 The dataset includes 531 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069968-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26639052
title: Additional file 3 of Fake IDs? Widespread misannotation of DNA transposons as a general transcription factor

description: Additional file 3. Text file of multiple alignment of mammalian GTF2IRD2/2A to predicted GTF2IRD2/2A sequences in vertebrates
DOI: 10.6084/m9.figshare.26639052.v1
title: Additional file 3 of Fake IDs? Widespread misannotation of DNA transposons as a general transcription factor

description: Additional file 3. Text file of multiple alignment of mammalian GTF2IRD2/2A to predicted GTF2IRD2/2A sequences in vertebrates
DOI: 10.6084/m9.figshare.24558148
title: Additional file 1 of Composition, function, and timing: exploring the early-life gut microbiota in piglets for probiotic interventions

description: Additional file 1: Table S1. Comparison of metagenomic assembly results between two methods that were described in method section. Table S2. The statistics of 16S rRNA gene sequencing data. Table S3. The statistics of metagenome sequencing data. Table S4. The average abundance of biomarker species at each time point. Table S5. The relative abundance and characteric of phyla that were only dected in metagenomic sequencing data. Table S6. The biomarker genera that were identified under 16S rRNA gene sequencing and metagenomic data. Table S7. Attributes of microbial interaction networks at three time points. Table S8. Phenotype and meta information of experimental animal in this study.
DOI: 10.6084/m9.figshare.24558148.v1
title: Additional file 1 of Composition, function, and timing: exploring the early-life gut microbiota in piglets for probiotic interventions

description: Additional file 1: Table S1. Comparison of metagenomic assembly results between two methods that were described in method section. Table S2. The statistics of 16S rRNA gene sequencing data. Table S3. The statistics of metagenome sequencing data. Table S4. The average abundance of biomarker species at each time point. Table S5. The relative abundance and characteric of phyla that were only dected in metagenomic sequencing data. Table S6. The biomarker genera that were identified under 16S rRNA gene sequencing and metagenomic data. Table S7. Attributes of microbial interaction networks at three time points. Table S8. Phenotype and meta information of experimental animal in this study.
DOI: 10.1594/pangaea.869457
title: (Table 3.1) Major and trace element composition of basalt from dredge samples from Sonne cruise SO84