cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7589784
title: Replication Data for: ``Toward machine learning-augmented, bathymetry-aware parameterizations of mesoscale eddy buoyancy fluxes across upwelling slope fronts''

description: This dataset contains the Python scripts for training the Artificial Neural Networks (ANNs), the trained ANNs, configuration files for the reference 2D MITgcm simulations, and model outputs used in the paper.
DOI: 10.6084/m9.figshare.21975293
title: Ancient origin of Jingchuvirales derived glycoproteins integrated in arthropod genomes

description: Suplementary material of the linked paper.
DOI: 10.6084/m9.figshare.21975293.v1
title: Ancient origin of Jingchuvirales derived glycoproteins integrated in arthropod genomes

description: Suplementary material of the linked paper.
DOI: 10.5281/zenodo.7594057
title: Supplementary Data for "The Phosphorus Budget of the Silicate Earth Based on an Updated Estimate of the P/Nd Ratio" in JGR-Solid Earth.

description: Supplementary data tables for Ma et al. (2023) associated with the paper entitled "The Phosphorus Budget of the Silicate Earth Based on an Updated Estimate of the P/Nd Ratio" published in <em>JGR-Solid Earth</em>.
DOI: 10.5281/zenodo.7594056
title: Supplementary Data for "The Phosphorus Budget of the Silicate Earth Based on an Updated Estimate of the P/Nd Ratio" in JGR-Solid Earth.

description: Supplementary data tables for Ma et al. (2023) associated with the paper entitled "The Phosphorus Budget of the Silicate Earth Based on an Updated Estimate of the P/Nd Ratio" published in <em>JGR-Solid Earth</em>.
DOI: 10.5281/zenodo.7594177
title: Secondary tricuspid regurgitation

description: Database about STR
DOI: 10.5281/zenodo.7594176
title: Secondary tricuspid regurgitation

description: Database about STR
DOI: 10.6084/m9.figshare.21534192
title: The immediate effects of polyploidisation of Spirodela polyrhiza change in a strain specific way along environmental gradients

description: Data and sas code used in the evolution letters paper: The immediate effects of polyploidisation of Spirodela polyrhiza change in a strain specific way along environmental gradients
DOI: 10.6084/m9.figshare.21534192.v1
title: The immediate effects of polyploidisation of Spirodela polyrhiza change in a strain specific way along environmental gradients

description: Data and sas code used in the evolution letters paper: The immediate effects of polyploidisation of Spirodela polyrhiza change in a strain specific way along environmental gradients
DOI: 10.5258/soton/d2514
title: Dataset supporting publication "Exploration of Decision Sub-Network Architectures for FPGA-based Dynamic DNNs"

description: This dataset supports the publication " Exploration of Decision Sub-Network Architectures for FPGA-based Dynamic DNNs " to be published in the Proceedings of the 2023 Design, Automation and Test in Europe Conference and Exhibition. This dataset contains: - 'Fig2a.csv': Data supporting Fig. 2 (a). Execution time in ms of the Dynamic Deep Neural Network on different platforms. (CPU, CPU+GPU, Jetson Xavier and FPGA Xilinx ZCU106). - 'Fig2b.csv': Data supporting Fig. 2 (b). Energy consumption and needed power for the execution of the Dynamic Deep Neural network on different platforms. (CPU, CPU+GPU, Jetson Xavier and FPGA Xilinx ZCU106). Related projects: Engineering and Physical Sciences Research Council (EPSRC) under EP/S030069/1 Licence: CC BY 4.0
DOI: 10.6084/m9.figshare.21789617
title: Supplementary Material for: New Theory Illustrates the Formation of Enamel Cup-Shaped Lesions on Occlusal Surfaces

description: We propose a new theory for enamel cupping lesions formation. At early stages, naturally-formed cupping lesions showed increased porosity at two structural prismatic traits: the central cone extending into the enamel-dentine junction and the type-I Hunther-Schreger bands (HSB), suggesting them to be the main drivers for cupping lesion formation and development. In addition, these lesions were circumscribed by type-II HSBs, which present lower surface porosity and higher resistance to wear. This theory was verified in in vitro observations, where both the central cone and the type-I HSB of cuspal enamel showed higher susceptibility to wear, potentially elucidating the mechanisms involved on cupping lesion formation.
DOI: 10.6084/m9.figshare.21789617.v1
title: Supplementary Material for: New Theory Illustrates the Formation of Enamel Cup-Shaped Lesions on Occlusal Surfaces

description: We propose a new theory for enamel cupping lesions formation. At early stages, naturally-formed cupping lesions showed increased porosity at two structural prismatic traits: the central cone extending into the enamel-dentine junction and the type-I Hunther-Schreger bands (HSB), suggesting them to be the main drivers for cupping lesion formation and development. In addition, these lesions were circumscribed by type-II HSBs, which present lower surface porosity and higher resistance to wear. This theory was verified in in vitro observations, where both the central cone and the type-I HSB of cuspal enamel showed higher susceptibility to wear, potentially elucidating the mechanisms involved on cupping lesion formation.
DOI: 10.5281/zenodo.7594227
title: Replication package for: Credit Access, Selection, and Incentives in a Market for Asset Collateralized Loans: Evidence from Kenya

description: Paper: Credit Access, Selection, and Incentives in a Market for Asset Collateralized Loans: Evidence from Kenya, by William Jack, Michael Kremer, Joost de Laat and Tavneet Suri, Forthcoming, the Review of Economic Studies. The replication package includes the data and do files for the experiment reported on in the paper.
DOI: 10.5281/zenodo.7102214
title: Replication package for: Credit Access, Selection, and Incentives in a Market for Asset Collateralized Loans: Evidence from Kenya

description: Paper: Credit Access, Selection, and Incentives in a Market for Asset Collateralized Loans: Evidence from Kenya, by William Jack, Michael Kremer, Joost de Laat and Tavneet Suri, Forthcoming, the Review of Economic Studies. The replication package includes the data and do files for the experiment reported on in the paper.
DOI: 10.5281/zenodo.7594210
title: Catalogue of X-ray photon fluence spectra of electronic brachytherapy device Axxent manufactured by Xoft

description: The catalogue was compiled from suitable data available in literature and from the data measured or created by the project "18NRM02 PRISM-eBT" (Primary standards and traceable measurement methods for X-ray emitting electronic brachytherapy devices; http://www.ebt-empir.eu/) of the European Metrology Programme for Innovation and Research (EMPIR). The main goal of the catalogue was to develop a set of harmonised reference X-ray qualities denoted as “eBT equivalent” that would be established for in-laboratory activities by the X-ray tubes usually available for calibration in calibration laboratories, but the tube voltage and the filter are specifically selected to simulate the energy spectrum of the corresponding eBT radiation as closely as possible at the reference point. The catalogue contains the following spectra: 1) X-ray spectrum for 50 kVp in 1 cm water depth obtained using Monte Carlo simulation.<br> 2) eBT-equivalent spectrum in 1 cm water depth calculated from 1) with SpekPy software.<br> 3) X-ray spectrum for 50 kVp in 1 cm water depth obtained using Monte Carlo simulation.<br> 4) X-ray fluence spectrum in air laterally at 50 cm distance measured by NIST presented in graphical form only.
DOI: 10.5281/zenodo.7594209
title: Catalogue of X-ray photon fluence spectra of electronic brachytherapy device Axxent manufactured by Xoft

description: The catalogue was compiled from suitable data available in literature and from the data measured or created by the project "18NRM02 PRISM-eBT" (Primary standards and traceable measurement methods for X-ray emitting electronic brachytherapy devices; http://www.ebt-empir.eu/) of the European Metrology Programme for Innovation and Research (EMPIR). The main goal of the catalogue was to develop a set of harmonised reference X-ray qualities denoted as “eBT equivalent” that would be established for in-laboratory activities by the X-ray tubes usually available for calibration in calibration laboratories, but the tube voltage and the filter are specifically selected to simulate the energy spectrum of the corresponding eBT radiation as closely as possible at the reference point. The catalogue contains the following spectra: 1) X-ray spectrum for 50 kVp in 1 cm water depth obtained using Monte Carlo simulation.<br> 2) eBT-equivalent spectrum in 1 cm water depth calculated from 1) with SpekPy software.<br> 3) X-ray spectrum for 50 kVp in 1 cm water depth obtained using Monte Carlo simulation.<br> 4) X-ray fluence spectrum in air laterally at 50 cm distance measured by NIST presented in graphical form only.
DOI: 10.5281/zenodo.7594253
title: ADDED Echo Value

description: Added Echo Value dataset
DOI: 10.5281/zenodo.7594252
title: ADDED Echo Value

description: Added Echo Value dataset
DOI: 10.6084/m9.figshare.21988817
title: Supplementary Material for: Clinical and Prognostic Impact of the Warburg Effect in Esophageal Carcinoma: Monocarboxylate Transporters as Candidates for Therapeutic Targeting

description: <b><i>Introduction:</i></b> Esophageal cancer (EC) seems to display increased glycolytic activity, but clinical studies on the expression/prognostic significance of glycometabolism-related proteins, as well as functional assays, are missing. <b><i>Methods:</i></b> Expression of 10 glycolytic biomarkers was evaluated by immunohistochemistry in tissue sections from 95 patients. Two esophageal squamous cell carcinoma (ESCC) cell lines were used to assess the effect of monocarboxylate transporter (MCT) downregulation on cell viability and extracellular lactate/glucose accumulation. <b><i>Results:</i></b> Expression of MCT1, MCT4, CD147, and GLUT1 was significantly associated with an ESCC histopathology, while a poor clinicopathological profile was seen in GLUT1- and LDHA-positive EC cases. In the ESCC group, MCT1 immunoreactivity is associated with high TNM stage and metastasis. The 3-year overall survival (OS) rate was significantly influenced by MCT4 and CAIX positivity and HKII negativity. Those biomarkers were considered independent prognostic factors of OS in multivariate analysis. Dual inhibition of MCT1/4 expression decreased cell viability and extracellular lactate accumulation in ESCC cells. <b><i>Conclusion:</i></b> Elevated glycolytic rates correlate with a poor clinicopathological profile in EC patients. MCT4 and CAIX positivity independently predict a worse prognosis. Due to the lack of information on treatment modalities, we could not further infer the role of these biomarkers in predicting response to therapy, which needs to be assessed in future studies. In addition, MCT1/4 targeting should be performed both “in vitro” and “in vivo” to further explore its impact on tumor growth and response to classical therapies. HKII expression and function, particularly in the tumor stroma, should be investigated.
DOI: 10.6084/m9.figshare.21988817.v1
title: Supplementary Material for: Clinical and Prognostic Impact of the Warburg Effect in Esophageal Carcinoma: Monocarboxylate Transporters as Candidates for Therapeutic Targeting

description: <b><i>Introduction:</i></b> Esophageal cancer (EC) seems to display increased glycolytic activity, but clinical studies on the expression/prognostic significance of glycometabolism-related proteins, as well as functional assays, are missing. <b><i>Methods:</i></b> Expression of 10 glycolytic biomarkers was evaluated by immunohistochemistry in tissue sections from 95 patients. Two esophageal squamous cell carcinoma (ESCC) cell lines were used to assess the effect of monocarboxylate transporter (MCT) downregulation on cell viability and extracellular lactate/glucose accumulation. <b><i>Results:</i></b> Expression of MCT1, MCT4, CD147, and GLUT1 was significantly associated with an ESCC histopathology, while a poor clinicopathological profile was seen in GLUT1- and LDHA-positive EC cases. In the ESCC group, MCT1 immunoreactivity is associated with high TNM stage and metastasis. The 3-year overall survival (OS) rate was significantly influenced by MCT4 and CAIX positivity and HKII negativity. Those biomarkers were considered independent prognostic factors of OS in multivariate analysis. Dual inhibition of MCT1/4 expression decreased cell viability and extracellular lactate accumulation in ESCC cells. <b><i>Conclusion:</i></b> Elevated glycolytic rates correlate with a poor clinicopathological profile in EC patients. MCT4 and CAIX positivity independently predict a worse prognosis. Due to the lack of information on treatment modalities, we could not further infer the role of these biomarkers in predicting response to therapy, which needs to be assessed in future studies. In addition, MCT1/4 targeting should be performed both “in vitro” and “in vivo” to further explore its impact on tumor growth and response to classical therapies. HKII expression and function, particularly in the tumor stroma, should be investigated.
DOI: 10.5281/zenodo.7249037
title: Daily maps for global daylight length at 30 arc seconds resolution (2022)

description: Overview:<br> Daily maps for global daylight length, calculated for the year 2022. Processing steps:<br> For each day within the year 2022, the photoperiod (sunshine hours on flat terrain) are calculated using the SOLPOS algorithm developed by the National Renewable Energy Laboratory (NREL), USA. Resultant values have been converted from hours to minutes. File naming scheme (DDD = day within year) (min is abbreviation for minute):<br> <code>daylight_min_2022_DDD.tif</code> Projection + EPSG code:<br> Latitude-Longitude/WGS84 (EPSG: 4326) Spatial extent:<br> north: 90<br> south: -90<br> west: -180<br> east: 180 Spatial resolution:<br> 30 arc seconds (approx. 1000 m) Temporal resolution:<br> Daily Pixel values:<br> unit: minutes Software used:<br> GDAL 3.2.2 and GRASS GIS 8.2.0 License: CC-BY-SA 4.0 Processed by:<br> mundialis GmbH & Co. KG, Germany (https://www.mundialis.de/) Reference: National Renewable Energy Laboratory (NREL): SOLPOS 2.0 sun position algorithm (https://www.nrel.gov/grid/solar-resource/solpos.html)
description: Acknowledgements: This study was partially funded by EU grant 874850 MOOD. The contents of this publication are the sole responsibility of the authors and don't necessarily reflect the views of the European Commission.
DOI: 10.5281/zenodo.7249036
title: Daily maps for global daylight length at 30 arc seconds resolution (2022)

description: Overview:<br> Daily maps for global daylight length, calculated for the year 2022. Processing steps:<br> For each day within the year 2022, the photoperiod (sunshine hours on flat terrain) are calculated using the SOLPOS algorithm developed by the National Renewable Energy Laboratory (NREL), USA. Resultant values have been converted from hours to minutes. File naming scheme (DDD = day within year) (min is abbreviation for minute):<br> <code>daylight_min_2022_DDD.tif</code> Projection + EPSG code:<br> Latitude-Longitude/WGS84 (EPSG: 4326) Spatial extent:<br> north: 90<br> south: -90<br> west: -180<br> east: 180 Spatial resolution:<br> 30 arc seconds (approx. 1000 m) Temporal resolution:<br> Daily Pixel values:<br> unit: minutes Software used:<br> GDAL 3.2.2 and GRASS GIS 8.2.0 License: CC-BY-SA 4.0 Processed by:<br> mundialis GmbH & Co. KG, Germany (https://www.mundialis.de/) Reference: National Renewable Energy Laboratory (NREL): SOLPOS 2.0 sun position algorithm (https://www.nrel.gov/grid/solar-resource/solpos.html)
description: Acknowledgements: This study was partially funded by EU grant 874850 MOOD. The contents of this publication are the sole responsibility of the authors and don't necessarily reflect the views of the European Commission.
DOI: 10.21227/f0nc-hc38
title: Piedmont Photovoltaic Panels Dataset

description: Solar energy production has grown significantly in recent years in the European Union (EU), accounting for 12\% of the total in 2022. The growth can be attributed to the increasing adoption of solar photovoltaic (PV) panels, which have become cost-effective and efficient means of energy production, supported by government policies and incentives. The maturity of solar technologies has also led to a decrease in the cost of solar energy, making it more competitive with other energy sources. As a result, there is a growing need for efficient methods for detecting and mapping the locations of PV panels. An automated detection can in fact save time and resources compared to manual inspection. Moreover, the resulting information can also be used by governments, environmental agencies and other companies to track the adoption of renewable sources or to optimize the energy distribution across the grid.However, building such an automated system presents several challenges, including the availability of high-resolution aerial imagery, high-quality, manually-verified labels and annotations, and consequently effective models.  We address these challenges by constructing a dataset of PV panels using very-high resolution (VHR) aerial imagery, specifically focusing on the region of Piedmont in Italy. The dataset comprises 105 large-scale images, providing more than 9,000 accurate and detailed manual annotations, including a set of attributes such as the PV panel category.On this dataset, we perform a comprehensive benchmark evaluation of different deep learning techniques, comparing semantic and instance segmentation approaches and making ad-hoc modifications to address specific the issues of this task, such as the wide range of scales of the installations and the sparsity of the annotations.
DOI: 10.5281/zenodo.7594332
title: Tricuspid annulus 3D reference values

description: 3D echo data about tricuspid annulus geometry from healthy subjects
DOI: 10.5281/zenodo.7594331
title: Tricuspid annulus 3D reference values

description: 3D echo data about tricuspid annulus geometry from healthy subjects
DOI: 10.5281/zenodo.7560809
title: In- and output files for krill growth models intercomparison (Bahlburg et al. 2023)

description: These datasets are required to re-run the krill growth model simulations presented in Bahlburg et al. (2023) The code repository can be found under https://github.com/dbahlburg/krillGrowthModelsComparison The ZIP file contains two folders: One containing the input data including the climatologies which should be deposited into inputData/climatologies in the project The other folder contains the simulation results which should be copied into the "simulationResults"-folder in order to run the "10ManuscriptPlots.R"-Script.
DOI: 10.5281/zenodo.7560808
title: In- and output files for krill growth models intercomparison (Bahlburg et al. 2023)

description: These datasets are required to re-run the krill growth model simulations presented in Bahlburg et al. (2023) The code repository can be found under https://github.com/dbahlburg/krillGrowthModelsComparison The ZIP file contains two folders: One containing the input data including the climatologies which should be deposited into inputData/climatologies in the project The other folder contains the simulation results which should be copied into the "simulationResults"-folder in order to run the "10ManuscriptPlots.R"-Script.
DOI: 10.5281/zenodo.7594312
title: ROM model data for Eastern Mediterranean Dense Water Formation

description: ROM model data for Eastern Mediterranean Dense Water Formation
DOI: 10.5517/ccdc.csd.cc25bv6l
title: CCDC 2006419: Experimental Crystal Structure Determination

description: Related Article: Delbert S. Botes, Sanaz Khorasani, Demetrius C. Levendis, Manuel A. Fernandes|2022|CrystEngComm|24|7563|doi:10.1039/D2CE01094A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25bvds
title: CCDC 2006425: Experimental Crystal Structure Determination

description: Related Article: Delbert S. Botes, Sanaz Khorasani, Demetrius C. Levendis, Manuel A. Fernandes|2022|CrystEngComm|24|7563|doi:10.1039/D2CE01094A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29x09k
title: CCDC 2142078: Experimental Crystal Structure Determination

description: Related Article: Jing Zhao|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25dvv9
title: CCDC 2008361: Experimental Crystal Structure Determination

description: Related Article: Güneş Süheyla Kürkçüoğlu,  Okan Zafer Yeşilel,  Elvan Sayın,  Onur Şahin|2022|J.Coord.Chem.|75|1352|doi:10.1080/00958972.2022.2096449
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25dvwb
title: CCDC 2008362: Experimental Crystal Structure Determination

description: Related Article: Güneş Süheyla Kürkçüoğlu,  Okan Zafer Yeşilel,  Elvan Sayın,  Onur Şahin|2022|J.Coord.Chem.|75|1352|doi:10.1080/00958972.2022.2096449
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25dvxc
title: CCDC 2008363: Experimental Crystal Structure Determination

description: Related Article: Güneş Süheyla Kürkçüoğlu,  Okan Zafer Yeşilel,  Elvan Sayın,  Onur Şahin|2022|J.Coord.Chem.|75|1352|doi:10.1080/00958972.2022.2096449
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25dvyd
title: CCDC 2008364: Experimental Crystal Structure Determination

description: Related Article: Güneş Süheyla Kürkçüoğlu,  Okan Zafer Yeşilel,  Elvan Sayın,  Onur Şahin|2022|J.Coord.Chem.|75|1352|doi:10.1080/00958972.2022.2096449
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.