cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/rwcw59p9g2.6
title: Supplementary information for: "Spatio-Seasonal Variations and Factor Groupings of Surface Water Quality in the Arkavathi Reservoir Catchment and Command Area, India"

description: To analyse the surface water quality of the area, we begin by identifying the sub-watersheds using Survey of India (SOI) Topographic Maps of 1:50,000 scale – 57 H5, 57 H6, 57 H7, 57 H9, 57 H10, 57 H11. Based on the drainage features of the area, the study area is demarcated into six sub-watersheds. Drainage map, Geology map, Contour map, and Digital Elevation Model (DEM) map are prepared using RS and GIS. Once the sub-watersheds are demarcated, surface water samples within these sub-watersheds are collected for further analysis as explained in the sections below. 30 samples were collected over a study period of two years covering three prominent seasons of pre-monsoon, monsoon, and post-monsoon periods. These samples were then subjected to various physical, chemical, and bacteriological tests such as pH, temp., DO, BOD, etc. (Bureau of Indian Standards: Public Safety Standards of the Republic of India: Chemical: Environmental Protection and Waste Management) to ascertain its usage for domestic purposes as well as for agricultural activities.
DOI: 10.6084/m9.figshare.20163626
title: Amharic version

description: The English version was translated to the national working language Amharic.
DOI: 10.6084/m9.figshare.20163629
title: Quality Analysis of Varicocele Videos on YouTube

description: The data of the manuscript of Quality Analysis of Varicocele Videos on YouTube
DOI: 10.6084/m9.figshare.20163629.v1
title: Quality Analysis of Varicocele Videos on YouTube

description: The data of the manuscript of Quality Analysis of Varicocele Videos on YouTube
DOI: 10.6084/m9.figshare.20163654
title: List of annotated genes on X-linked scaffolds with 'reproductive barrier' candidate SNPs from Restricted X chromosome introgression and support for Haldane's rule in hybridizing damselflies

description: Table referred to in the manuscript as Table S7
DOI: 10.6084/m9.figshare.20163660
title: Distribution of ‘reproductive barrier’ SNPs along X-linked scaffolds from Restricted X chromosome introgression and support for Haldane's rule in hybridizing damselflies

description: Table referred to in the manuscript as Table S6
DOI: 10.6084/m9.figshare.20163660.v1
title: Distribution of ‘reproductive barrier’ SNPs along X-linked scaffolds from Restricted X chromosome introgression and support for Haldane's rule in hybridizing damselflies

description: Table referred to in the manuscript as Table S6
DOI: 10.34681/v3b9-vh94
title: National Study of Protective, Preventive, and Reunification Services Delivered to Children and Their Families, 1994

description: The passage of the Adoption Assistance and Child Welfare Act of 1980 (P.L. 96-272) significantly reoriented child welfare services from a system which focused on foster care placement to one which was intended to provide the services necessary to maintain children in their own homes. In response to the provisions of the law, state and county child welfare agencies developed new social service programs and sought new avenues for coordinating with other components of the human service delivery system.The purpose of the National Study of Protective, Preventive, and Reunification Services Delivered to Children and Their Families, 1994, is to provide a reliable national picture of the children and families in the ìnewî child welfare system. The study is designed not only to describe the current delivery system in terms of the number and characteristics of the children and families served by service type, but also to examine how agency, service, and client characteristics relate to case status. The dataset consists of three files. The main case file includes 2,109 observations and 1,205 variables. It includes information about the number, types and services provided to children and their families, with an emphasis on differences in annual and point-in-time data, case duration, in-home and out-of-home services, race and kinship care. Two additional files are provided to separate out the repeating records. These files augment the main case file and contain 11,335 observations and 25 variables about household members and their characteristics and delineation of children receiving services.
DOI: 10.6084/m9.figshare.20163650
title: English version original

description: The questionnaire was provided to experts in the field to review the tool.
DOI: 10.6084/m9.figshare.20163650.v1
title: English version original

description: The questionnaire was provided to experts in the field to review the tool.
DOI: 10.6084/m9.figshare.20163665
title: Post-review questionnaire

description: This is after experts reviewed and improved as per experts' comments.
DOI: 10.6084/m9.figshare.20163665.v1
title: Post-review questionnaire

description: This is after experts reviewed and improved as per experts' comments.
DOI: 10.5281/zenodo.6762087
title: ARRIVE guidelines

description: the ARRIVE guidelines for animal reporting according to the ethical approval
DOI: 10.6084/m9.figshare.20163647
title: m79

description: dfgdfl;gk;dfgl[d
DOI: 10.6084/m9.figshare.20163647.v1
title: m79

description: dfgdfl;gk;dfgl[d
DOI: 10.6084/m9.figshare.20163692
title: AVE

description: This set of data contains factors, factor loading, and average variance explained.
DOI: 10.6084/m9.figshare.20163692.v1
title: AVE

description: This set of data contains factors, factor loading, and average variance explained.
DOI: 10.34681/qr16-8m95
title: Third National Incidence Study on Child Abuse and Neglect (NIS-3)

description: The National Incidence Study (NIS) is a congressionally mandated, periodic effort of the National Center on Child Abuse and Neglect (NCCAN). The third NIS (NIS-3) was conducted between 1993 and 1995, and published in 1996. NIS-3 had several objectives: To provide current estimates of the incidence of child abuse and neglect in the US and measure changes in these estimates from earlier studies. To examine the distribution of child maltreatment in relation to various demographic factors. To estimate the incidence of substantiated maltreatment cases that result in civil and criminal proceedings and their disposition. To develop an understanding of the relationship between an incident of maltreatment, its observation, its report to a child protective service agency, and any actions taken by the agency. Data were collected during a 3-month period in the fall of 1993 from child protective service agencies and other community agencies, including schools and health agencies, in 42 counties selected to be nationally representative. Stringent safeguards were followed to ensure the confidentiality of all children, family members, and others involved in suspected maltreatment and of all individuals who provided data to the study.
DOI: 10.6084/m9.figshare.15025995
title: Supplementary Data File 1

description: Hyperparameter Optimization Results. Hyperparameter optimization results across integration methods integrating three <em>Schizosaccharomyces pombe</em> networks. The chosen (best) hyperparameter combinations for each method are highlighted.
DOI: 10.6084/m9.figshare.15025995.v2
title: Hyperparameter Optimization Results

description: Hyperparameter optimization results across integration methods integrating three Schizosaccharomyces pombe networks. The chosen (best) hyperparameter combinations for each method are highlighted.<br>
DOI: 10.6084/m9.figshare.14866917
title: Supplementary Data File 2

description: Integrated Network Details. Publication, gene count, edge count and experimental type for each yeast network and each human network used in <strong>Fig. 2-6</strong>. Rows in yellow indicate the three yeast networks used in <strong>Fig. 2-4, 6</strong> integrations.
DOI: 10.6084/m9.figshare.14866917.v2
title: Integrated Networks Details.xlsx

description: Publication, gene count, edge count and experimental type for each yeast network and each human network used in Fig. 2 and 3. Rows in yellow (first three rows) indicate the yeast networks used in Fig. 2 integrations.
DOI: 10.6084/m9.figshare.14983683
title: Supplementary Data File 3

description: Evaluation Standards Details. Gene count, co-annotation count, module count and class count details for each standard used in the <strong>Fig. 2-5</strong> evaluations.
DOI: 10.6084/m9.figshare.14983683.v3
title: Supplementary Data File 3

description: Evaluation Standards Details. Gene count, co-annotation count, module count and class count details for each standard used in the <strong>Fig. 2-5</strong> evaluations.
DOI: 10.6084/m9.figshare.14983683.v2
title: Figure 2 Evaluation Standards Details

description: Gene count, co-annotation count, module count and class count details for each standard used in the Fig. 2 and 3 evaluations.
DOI: 10.6084/m9.figshare.14975298
title: Supplementary Data File 4

description: Module Detection Results. Overlap of standard-optimized clusters obtained from the <strong>Fig. 2c</strong> module detection analysis for networks as well as integration methods. Module standards are IntAct Complexes, KEGG Pathways and GO Biological Processes.
DOI: 10.6084/m9.figshare.14975298.v3
title: Figure 2 Module Detection Results

description: Overlap of standard-optimized clusters obtained from the Fig. 2 module detection analysis for networks and integration methods. Module standards are IntAct Complexes, KEGG Pathways and GO Biological Processes.
DOI: 10.5281/zenodo.6762121
title: Wikidata Dump

description: RDF dump of wikidata produced with wdumper.<br>View on wdumper<b>entity count<b>: 1031857, <b>statement count</b>: 9458674, <b>triple count</b>: 24554315</b></b>
DOI: 10.5281/zenodo.6762120
title: Wikidata Dump

description: RDF dump of wikidata produced with wdumper.<br>View on wdumper<b>entity count<b>: 1031857, <b>statement count</b>: 9458674, <b>triple count</b>: 24554315</b></b>
DOI: 10.6084/m9.figshare.14976747
title: Supplementary Data File 5

description: Extended Data Fig. 4-5 Module Detection Results. Overlap of known per-module-optimized clusters obtained from the <strong>Fig. 2, 3</strong> input networks and integration methods, with IntAct Complex, KEGG Pathway and GO Biological Process modules.
DOI: 10.6084/m9.figshare.14976747.v2
title: Fig. S3, S4 Module Detection Results

description: Overlap of known per-module-optimized clusters obtained from the Fig. 2 input networks and integration methods, with IntAct Complex, KEGG Pathway and GO Biological Process modules.
DOI: 10.34681/e60h-ze25
title: Child Maltreatment Recurrences Among Families Served by Child Protective Services, 1984 to 1992

description: This longitudinal study of 1,206 families assembled during a 4-year NCCAN-funded research project focuses on recurrences of child maltreatment among families known to public Child Protective Services (CPS). Objectives are to (1) describe recurrence of types, severity, rates, distributions, and frequency of maltreatment over five years; (2) replicate and extend knowledge about predicting recurrence risk after an index incident; (3) initiate development of models to predict recurrence risk after termination of CPS services; and (4) determine (a) whether variables that discriminate between maltreating and non-maltreating families are correlates of recurrent maltreatment and (b) whether hypotheses from models formulated to explain why some parents maltreat also explain recurrences. Products will include risk assessment models.
DOI: 10.6084/m9.figshare.16645894
title: Supplementary Data File 6

description: 50 Compound TS Allele Screen Results. Files containing the TS allele CG-scores and IQR-scores, screened against 50 compounds (at multiple concentrations) that were selected by BIONIC.
DOI: 10.6084/m9.figshare.16645894.v1
title: 50 Compound TS Allele Screen Results

description: Files containing the TS allele CG-scores and IQR-scores, screened against 50 compounds (at multiple concentrations) that were selected by BIONIC.
DOI: 10.5281/zenodo.6762128
title: Data Set of Publication on Accurate Performance Predictions with Component-based Models of Data Streaming Applications

description: This is the data set for the article "Accurate Performance Predictions with Component-based Models of Data Streaming Applications" by Dominik Werle, Stephan Seifermann and Anne Koziolek which appears in the proceedings of the 16th European Conference on Software Architecture (ECSA). The data set contains measurements of the evaluation system, models of the system, simulation results, derived analysis results and code for running the simulation. This work was supported by KASTEL Security Research Labs and by the German Research Foundation (DFG) under project number 432576552, HE8596/1-1 (FluidTrust).
DOI: 10.5281/zenodo.6762127
title: Data Set of Publication on Accurate Performance Predictions with Component-based Models of Data Streaming Applications

description: This is the data set for the article "Accurate Performance Predictions with Component-based Models of Data Streaming Applications" by Dominik Werle, Stephan Seifermann and Anne Koziolek which appears in the proceedings of the 16th European Conference on Software Architecture (ECSA). The data set contains measurements of the evaluation system, models of the system, simulation results, derived analysis results and code for running the simulation. This work was supported by KASTEL Security Research Labs and by the German Research Foundation (DFG) under project number 432576552, HE8596/1-1 (FluidTrust).
DOI: 10.6084/m9.figshare.15158037
title: Supplementary Data File 7

description: Essential Gene Compound Sensitivity Predictions. Essential yeast gene compound sensitivity predictions for 50 selected compounds using BIONIC.<br>
DOI: 10.6084/m9.figshare.15158037.v4
title: Essential Gene Compound Sensitivity Predictions

description: Essential yeast gene compound sensitivity predictions for 50 selected compounds using BIONIC.<br>
DOI: 10.6084/m9.figshare.16632286
title: Supplementary Data File 8

description: Integrated BIONIC Features. Learned BIONIC features from yeast networks (protein-protein interaction, co-expression, and genetic interaction) integrated and used in <strong>Fig. 2, 3, 6</strong>.
DOI: 10.6084/m9.figshare.16632286.v1
title: BIONIC Yeast Features

description: Learned BIONIC features from yeast networks (protein-protein interaction, co-expression, and genetic interaction) integrated in Fig. 2.
DOI: 10.6084/m9.figshare.16629139
title: Supplementary Data File 9

description: Evaluation Standards. Yeast evaluation standards for co-annotation prediction, module detection, and gene function prediction used in <strong>Fig. 2a, 3a, 4, 5a</strong> as well as the human co-annotation standard used in <strong>Fig. 5b</strong>.<br>
DOI: 10.6084/m9.figshare.16629139.v3
title: Evaluation Standards

description: Yeast evaluation standards for co-annotation prediction, module detection, and gene function prediction used in Fig. 2a, 3a, 4, 5a as well as human co-annotation standard used in Fig. 5b.<br>
DOI: 10.13020/rv3y-4x19
title: Data for Even modest climate change may lead to major transitions for boreal forests
DOI: 10.5281/zenodo.6762196
title: Beef Processing Microbiome Furbeck et al. FASTQ

description: FASTQ Files for the Manuscript "Investigating the Impact of Manufacturing Steps During Meat Processing of the Beef Microbiome". To use, download, and place in a folder called "fastq" within a directory containing .Rmd and .RDS from code linked described in manuscript.
DOI: 10.5281/zenodo.6762195
title: Beef Processing Microbiome Furbeck et al. FASTQ

description: FASTQ Files for the Manuscript "Investigating the Impact of Manufacturing Steps During Meat Processing of the Beef Microbiome". To use, download, and place in a folder called "fastq" within a directory containing .Rmd and .RDS from code linked described in manuscript.
DOI: 10.5281/zenodo.5544352
title: Leveraging Relational Concept Analysis for Automated Feature Location in Software Product Lines - Artefacts DataSet

description: This Archive contains the Artefact of the paper, submitted at GPCE2021 :<br> Leveraging Relational Concept Analysis for Automated Feature Location in Software Product Lines It contains the dataset and the results of our Feature Location techniques when applied to this dataset.
DOI: 10.23641/asha.20044403
title: One-year neurodevelopmental outcomes after neonatal opioid withdrawal syndrome (Benninger et al., 2022)

description: <strong>Purpose: </strong>The aims of this study were, in a cohort of children with neonatal opioid withdrawal syndrome (NOWS), (a) to report 1-year neurodevelopmental outcomes and specifically characterize speech, language, and hearing outcomes and (b) to report the prevalence of cleft lip and/or cleft palate. <strong>Method: </strong>This prospective observational cohort study includes newborns with confirmed in utero opioid exposure who received pharmacological treatment for NOWS. During 1-year-old developmental visits, we administered standardized assessments (Bayley Scales of Infant and Toddler Development–Third Edition [Bayley-III] or Developmental Assessment of Young Children–Second Edition [DAYC-2]—due to COVID-19 restrictions). We compared Bayley-III scores to standardized population means using one-sample <em>z</em> tests. We report estimates, 95% confidence intervals, and two-sided <em>p</em> values. <strong>Results:</strong> We enrolled 202 infants (October 2018 to March 2020). Follow-up at 1-year was 80%. Infants with NOWS had lower Bayley-III scores at 1 year compared to published norms for cognitive, language, and motor domains. One infant with NOWS was diagnosed with isolated cleft palate and Pierre Robin sequence. All infants passed the newborn hearing screen, and 7.5% had a formal hearing evaluation after neonatal intensive care unit discharge, with 40% having abnormal or inconclusive results; middle ear effusion was the leading cause of abnormal hearing (66.7%). Ten percent of children received a speech-language pathology referral prior to 2 years of age. Infants born to mothers with mental health conditions were more likely to have Bayley-III or DAYC-2 scores below 95 in language or motor domains. <strong>Conclusions:</strong> Infants with pharmacologically treated NOWS have significantly lower cognitive, language, and motor scores on standardized developmental testing compared to population means at 1 year of age. Early speech-language pathology referral is frequently necessary to promote optimal development in this population. <br> <strong>Supplemental Material S1.</strong> 1-year neurodevelopmental outcomes after neonatal opioid withdrawal syndrome. <br> Benninger, K. L., Richard, C., Conroy, S., Newton, J., Taylor, H. G., Sayed, A., Pietruszewski, L., Nelin, M. A., Batterson, N., & Maitre, N. L. (2022). One-year neurodevelopmental outcomes after neonatal opioid withdrawal syndrome: A prospective cohort study. <em>Perspectives of the ASHA Special Interest Groups</em>. Advance online publication. https://doi.org/10.1044/2022_PERSP-21-00270
DOI: 10.23641/asha.20044403.v1
title: One-year neurodevelopmental outcomes after neonatal opioid withdrawal syndrome (Benninger et al., 2022)

description: <strong>Purpose: </strong>The aims of this study were, in a cohort of children with neonatal opioid withdrawal syndrome (NOWS), (a) to report 1-year neurodevelopmental outcomes and specifically characterize speech, language, and hearing outcomes and (b) to report the prevalence of cleft lip and/or cleft palate. <strong>Method: </strong>This prospective observational cohort study includes newborns with confirmed in utero opioid exposure who received pharmacological treatment for NOWS. During 1-year-old developmental visits, we administered standardized assessments (Bayley Scales of Infant and Toddler Development–Third Edition [Bayley-III] or Developmental Assessment of Young Children–Second Edition [DAYC-2]—due to COVID-19 restrictions). We compared Bayley-III scores to standardized population means using one-sample <em>z</em> tests. We report estimates, 95% confidence intervals, and two-sided <em>p</em> values. <strong>Results:</strong> We enrolled 202 infants (October 2018 to March 2020). Follow-up at 1-year was 80%. Infants with NOWS had lower Bayley-III scores at 1 year compared to published norms for cognitive, language, and motor domains. One infant with NOWS was diagnosed with isolated cleft palate and Pierre Robin sequence. All infants passed the newborn hearing screen, and 7.5% had a formal hearing evaluation after neonatal intensive care unit discharge, with 40% having abnormal or inconclusive results; middle ear effusion was the leading cause of abnormal hearing (66.7%). Ten percent of children received a speech-language pathology referral prior to 2 years of age. Infants born to mothers with mental health conditions were more likely to have Bayley-III or DAYC-2 scores below 95 in language or motor domains. <strong>Conclusions:</strong> Infants with pharmacologically treated NOWS have significantly lower cognitive, language, and motor scores on standardized developmental testing compared to population means at 1 year of age. Early speech-language pathology referral is frequently necessary to promote optimal development in this population. <br> <strong>Supplemental Material S1.</strong> 1-year neurodevelopmental outcomes after neonatal opioid withdrawal syndrome. <br> Benninger, K. L., Richard, C., Conroy, S., Newton, J., Taylor, H. G., Sayed, A., Pietruszewski, L., Nelin, M. A., Batterson, N., & Maitre, N. L. (2022). One-year neurodevelopmental outcomes after neonatal opioid withdrawal syndrome: A prospective cohort study. <em>Perspectives of the ASHA Special Interest Groups</em>. Advance online publication. https://doi.org/10.1044/2022_PERSP-21-00270
DOI: 10.5517/ccdc.csd.cc2656qb
title: CCDC 2030801: Experimental Crystal Structure Determination

description: Related Article: Junjian Wang, Haotian Luo, Xinghua Wang, Donghui Wei, Rongqiang Tian, Zheng Duan|2022|Org.Lett.|24|4404|doi:10.1021/acs.orglett.2c01630
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.6762236
title: Curated data-set of crystal-structure prototypes of binary and ternary sp-d valent compounds

description: Curated collection of binary and ternary compounds of sp-valent elements and d-valent elements and their crystal-structure prototype. The data set includes binary and pseudo-binary compounds in binary prototypes (BinaryProtptype-BinaryCompound.csv), offstoichoimetric and ternary compounds in binary prototypes (BinaryPrototype-BinaryOffstoichiometricAndTernaryCompound.csv) and ternary compounds in ternary prototypes (TernaryPrototype-TernaryCompound.csv). The first column in each data set corresponds to the crystal-structure prototype, the second column to the chemical composition. Ternary compositions labelled A-B+C indicate that element B and element C occupy the same sublattice of the crystal structure. A+B-C correspondingly indicates that element A and element B occupy the same sublattice. These data sets were used to construct structure maps for predicting the crystal structure of a compound from only its chemical composition. For details on curation, further discussions and structure maps see original publications (Chem. Mater. 28, 2550−2556, 2016 and Modelling Simul. Mater. Sci. Eng. 25, 074002, 2017).