cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7439195
title: Campus Pond (Buffalo Creek Watershed) Data from 2022-06-13 to 2022-07-08

description: General Metadata for Campus Pond Sampling Station Files Specific metadata for each deployment and sensor can be found as text files with the file format of: <pre><code>BC_CampusPond_YYYY-MM-DD_YYYY-MM-DD_metadata.txt</code></pre> Where YYYY-MM-DD_YYYY-MM-DD is the date range of the sampling period. NOTE: The metadata in the above file is collected from the data logger and does not have all of fields present in the final data set, because some were created during data cleaning. Details on how the data were cleaned and variables created can be found at in the cleaning scripts on Gitlab https://gitlab.com/leo147/leo/-/tree/master/lab_notebook/data_processing/cleaning_scripts. File Created 2021-11-10 by KF - copied and modified from HS_wetland_general_metadata.md File Modified Description These data are from the sampling station in Campus Pond on the Longwood University Campus. The sensors are along the S shoreline of the pond (37.296813, -78.397702). All data are CC-BY and should be cited using the DOI available at https://zenodo.org/communities/leo/ Station Specifics The specific sensors at the site are: <pre><code>* Water Temperature (dC) and Dissolved Oxygen (mg/l) are collected with a Onset HOBO U26-001 Dissolved Oxygen Logger * Water Temperature (dC) and Water Pressure (mmHg) are collected with an Onset HOBO U20-001-01 Water Level Logger * Water Temperature (dC) and Conductivity are collected with an Onset HOBO U24-001 Conductivity Logger * Air Temperature (dC) and Barometric Pressure (mmHg) are collected with an Onset HOBO U20-001-01 Water Level Logger mounted in the air next to the wetland.</code></pre> The sensors are sampled every 15 minutes Measurement Parameters, units, and Variable Names <pre><code>* date.time - the date and time that the record was collected, reported in POSIX standard time (YYYY-MM-DD HH:MM:SS) * observation.DO, .CT, .press, or .BP - the incremental number of each observation from the DO, conductivity, water pressure, or barometric pressure sensor. * timestamp.DO, .CT, .press, or .BP - the data and time that the record was collected, as reported by the data logger (MM/DD/YY HH:MM:SS A/PM) from the DO, conductivity, water pressure, or barometric pressure sensor. * DO - the concentration of dissolved oxygen in the water (mg/L) * Temp.DO, .CT - the temperature (dC) from the DO or conductivity. * WaterTemp - the water temperature measured from the pressure transducer in the water (dC). * AirTemp - the air temperature measured from the pressure transducer (BP sensor) in the air (dC). * Pressure.press or .BP - the pressure recorded by the pressure transducer (kPa) on the water pressure or barometric pressure sensor. * Z - the depth of the water (cm). * Low_Range_CT - the conductivity read from 0 - 2500 uS/cm (uS/cm) * Full_Range_CT - the conductivity read from 0 - 15000 uS/cm (mmHg) * press.g.cm2 - the pressure from the water pressure sensor (g/cm^2) * BP.g.cm2 - the barometric pressure from the barometric pressure sensor (g/cm^2)</code></pre>
DOI: 10.5281/zenodo.7437616
title: Microscopy data (1/2): interaction of the gene iscub with RNA polymerase II clusters in inhibitor-treated zebrafish embryos

description: Microscopy image data containing fluorescently labeled gene loci, recruited RNA polymerase II, and elongating RNA polymerase II. This data set is for the gene <em>iscub</em> and is obtained from fixed zebrafish embryos, collected at the sphere stage of development. Embryos were treated prior to collection with control media, flavopiridol (10 µM, 30 minutes), JQ-1 (10 µM, 30 minutes), or hexanediol (3% weight/volume, 5 minutes). Data were recorded using an instant-SIM microscope (iSIM, VisiTech UK) with a 100X TIRF oil immersion objective (Nikon, NA 1.49, CFI SR HP Apo TIRF 100XAC Oil). Two samples were prepared per inhibitor condition, and images were recorded from 3-4 embryos per sample, as indicated in the file names. The image data are in the ND2 format (Nikon proprietary) and can be imported using the BioFormats importer (Open Microscopy Environment).
description: Additional data that did not fit the file size limit are available at this address: https://doi.org/10.5281/zenodo.7437676
DOI: 10.5281/zenodo.7437615
title: Microscopy data (1/2): interaction of the gene iscub with RNA polymerase II clusters in inhibitor-treated zebrafish embryos

description: Microscopy image data containing fluorescently labeled gene loci, recruited RNA polymerase II, and elongating RNA polymerase II. This data set is for the gene <em>iscub</em> and is obtained from fixed zebrafish embryos, collected at the sphere stage of development. Embryos were treated prior to collection with control media, flavopiridol (10 µM, 30 minutes), JQ-1 (10 µM, 30 minutes), or hexanediol (3% weight/volume, 5 minutes). Data were recorded using an instant-SIM microscope (iSIM, VisiTech UK) with a 100X TIRF oil immersion objective (Nikon, NA 1.49, CFI SR HP Apo TIRF 100XAC Oil). Two samples were prepared per inhibitor condition, and images were recorded from 3-4 embryos per sample, as indicated in the file names. The image data are in the ND2 format (Nikon proprietary) and can be imported using the BioFormats importer (Open Microscopy Environment).
description: Additional data that did not fit the file size limit are available at this address: https://doi.org/10.5281/zenodo.7437676
DOI: 10.5281/zenodo.7437676
title: Microscopy data (2/2): interaction of the gene iscub with RNA polymerase II clusters in inhibitor-treated zebrafish embryos

description: Microscopy image data containing fluorescently labeled gene loci, recruited RNA polymerase II, and elongating RNA polymerase II. This data set is for the gene <em>iscub</em> and is obtained from fixed zebrafish embryos, collected at the sphere stage of development. Embryos were treated for 30 minutes prior to collection with control media, flavopiridol (10 µM, 30 minutes), JQ-1 (10 µM, 30 minutes), or hexanediol (3% weight/volume, 5 minutes). Data were recorded using an instant-SIM microscope (iSIM, VisiTech UK) with a 100X TIRF oil immersion objective (Nikon, NA 1.49, CFI SR HP Apo TIRF 100XAC Oil). Two samples were prepared per inhibitor condition, and images were recorded from 3-4 embryos per sample, as indicated in the file names. The image data are in the ND2 format (Nikon proprietary) and can be imported using the BioFormats importer (Open Microscopy Environment).
description: Additional data that did not fit the file size limit are available at this address: https://doi.org/10.5281/zenodo.7437616
DOI: 10.5281/zenodo.7437675
title: Microscopy data (2/2): interaction of the gene iscub with RNA polymerase II clusters in inhibitor-treated zebrafish embryos

description: Microscopy image data containing fluorescently labeled gene loci, recruited RNA polymerase II, and elongating RNA polymerase II. This data set is for the gene <em>iscub</em> and is obtained from fixed zebrafish embryos, collected at the sphere stage of development. Embryos were treated for 30 minutes prior to collection with control media, flavopiridol (10 µM, 30 minutes), JQ-1 (10 µM, 30 minutes), or hexanediol (3% weight/volume, 5 minutes). Data were recorded using an instant-SIM microscope (iSIM, VisiTech UK) with a 100X TIRF oil immersion objective (Nikon, NA 1.49, CFI SR HP Apo TIRF 100XAC Oil). Two samples were prepared per inhibitor condition, and images were recorded from 3-4 embryos per sample, as indicated in the file names. The image data are in the ND2 format (Nikon proprietary) and can be imported using the BioFormats importer (Open Microscopy Environment).
description: Additional data that did not fit the file size limit are available at this address: https://doi.org/10.5281/zenodo.7437616
DOI: 10.48420/21701534
title: Supplementary Data for PhD Thesis: Myeloid cell ageing and wound healing: analysing ageing-related changes to myeloid cells and their impact on cutaneous wound healing

description: Single-cell RNA sequencing was peformed in young and mouse skin and Day 3 wounds to characterise the effects of ageing on healing progression. Differential expression gene lists for all cell populations charaterised in the thesis: <em><strong>Myeloid cell ageing and wound healing: analysing ageing-related changes to myeloid cells and their impact on cutaneous wound healing </strong></em>are included in this metadata <br> <br>
DOI: 10.48420/21701534.v2
title: Supplementary Data for PhD Thesis: Myeloid cell ageing and wound healing: analysing ageing-related changes to myeloid cells and their impact on cutaneous wound healing

description: Single-cell RNA sequencing was peformed in young and mouse skin and Day 3 wounds to characterise the effects of ageing on healing progression. Differential expression gene lists for all cell populations charaterised in the thesis: <em><strong>Myeloid cell ageing and wound healing: analysing ageing-related changes to myeloid cells and their impact on cutaneous wound healing </strong></em>are included in this metadata <br> <br>
DOI: 10.48420/21701534.v1
title: Myeloid cell ageing and wound healing: analysing ageing-related changes to myeloid cells and their impact on cutaneous wound healing. PhD Thesis

description: Single-cell RNA sequencing was peformed in young and mouse skin and Day 3 wounds to characterise the effects of ageing on healing progression. Differential expression gene lists for all cell populations charaterised in the thesis: <em><strong>Myeloid cell ageing and wound healing: analysing ageing-related changes to myeloid cells and their impact on cutaneous wound healing </strong></em>are included in this metadata <br> <br>
DOI: 10.5281/zenodo.7439199
title: Campus Pond (Buffalo Creek Watershed) Data from 2022-07-08 to 2022-09-01

description: General Metadata for Campus Pond Sampling Station Files Specific metadata for each deployment and sensor can be found as text files with the file format of: <pre><code>BC_CampusPond_YYYY-MM-DD_YYYY-MM-DD_metadata.txt</code></pre> Where YYYY-MM-DD_YYYY-MM-DD is the date range of the sampling period. NOTE: The metadata in the above file is collected from the data logger and does not have all of fields present in the final data set, because some were created during data cleaning. Details on how the data were cleaned and variables created can be found at in the cleaning scripts on Gitlab https://gitlab.com/leo147/leo/-/tree/master/lab_notebook/data_processing/cleaning_scripts. File Created 2021-11-10 by KF - copied and modified from HS_wetland_general_metadata.md File Modified Description These data are from the sampling station in Campus Pond on the Longwood University Campus. The sensors are along the S shoreline of the pond (37.296813, -78.397702). All data are CC-BY and should be cited using the DOI available at https://zenodo.org/communities/leo/ Station Specifics The specific sensors at the site are: <pre><code>* Water Temperature (dC) and Dissolved Oxygen (mg/l) are collected with a Onset HOBO U26-001 Dissolved Oxygen Logger * Water Temperature (dC) and Water Pressure (mmHg) are collected with an Onset HOBO U20-001-01 Water Level Logger * Water Temperature (dC) and Conductivity are collected with an Onset HOBO U24-001 Conductivity Logger * Air Temperature (dC) and Barometric Pressure (mmHg) are collected with an Onset HOBO U20-001-01 Water Level Logger mounted in the air next to the wetland.</code></pre> The sensors are sampled every 15 minutes Measurement Parameters, units, and Variable Names <pre><code>* date.time - the date and time that the record was collected, reported in POSIX standard time (YYYY-MM-DD HH:MM:SS) * observation.DO, .CT, .press, or .BP - the incremental number of each observation from the DO, conductivity, water pressure, or barometric pressure sensor. * timestamp.DO, .CT, .press, or .BP - the data and time that the record was collected, as reported by the data logger (MM/DD/YY HH:MM:SS A/PM) from the DO, conductivity, water pressure, or barometric pressure sensor. * DO - the concentration of dissolved oxygen in the water (mg/L) * Temp.DO, .CT - the temperature (dC) from the DO or conductivity. * WaterTemp - the water temperature measured from the pressure transducer in the water (dC). * AirTemp - the air temperature measured from the pressure transducer (BP sensor) in the air (dC). * Pressure.press or .BP - the pressure recorded by the pressure transducer (kPa) on the water pressure or barometric pressure sensor. * Z - the depth of the water (cm). * Low_Range_CT - the conductivity read from 0 - 2500 uS/cm (uS/cm) * Full_Range_CT - the conductivity read from 0 - 15000 uS/cm (mmHg) * press.g.cm2 - the pressure from the water pressure sensor (g/cm^2) * BP.g.cm2 - the barometric pressure from the barometric pressure sensor (g/cm^2)</code></pre>
DOI: 10.5281/zenodo.7439198
title: Campus Pond (Buffalo Creek Watershed) Data from 2022-07-08 to 2022-09-01

description: General Metadata for Campus Pond Sampling Station Files Specific metadata for each deployment and sensor can be found as text files with the file format of: <pre><code>BC_CampusPond_YYYY-MM-DD_YYYY-MM-DD_metadata.txt</code></pre> Where YYYY-MM-DD_YYYY-MM-DD is the date range of the sampling period. NOTE: The metadata in the above file is collected from the data logger and does not have all of fields present in the final data set, because some were created during data cleaning. Details on how the data were cleaned and variables created can be found at in the cleaning scripts on Gitlab https://gitlab.com/leo147/leo/-/tree/master/lab_notebook/data_processing/cleaning_scripts. File Created 2021-11-10 by KF - copied and modified from HS_wetland_general_metadata.md File Modified Description These data are from the sampling station in Campus Pond on the Longwood University Campus. The sensors are along the S shoreline of the pond (37.296813, -78.397702). All data are CC-BY and should be cited using the DOI available at https://zenodo.org/communities/leo/ Station Specifics The specific sensors at the site are: <pre><code>* Water Temperature (dC) and Dissolved Oxygen (mg/l) are collected with a Onset HOBO U26-001 Dissolved Oxygen Logger * Water Temperature (dC) and Water Pressure (mmHg) are collected with an Onset HOBO U20-001-01 Water Level Logger * Water Temperature (dC) and Conductivity are collected with an Onset HOBO U24-001 Conductivity Logger * Air Temperature (dC) and Barometric Pressure (mmHg) are collected with an Onset HOBO U20-001-01 Water Level Logger mounted in the air next to the wetland.</code></pre> The sensors are sampled every 15 minutes Measurement Parameters, units, and Variable Names <pre><code>* date.time - the date and time that the record was collected, reported in POSIX standard time (YYYY-MM-DD HH:MM:SS) * observation.DO, .CT, .press, or .BP - the incremental number of each observation from the DO, conductivity, water pressure, or barometric pressure sensor. * timestamp.DO, .CT, .press, or .BP - the data and time that the record was collected, as reported by the data logger (MM/DD/YY HH:MM:SS A/PM) from the DO, conductivity, water pressure, or barometric pressure sensor. * DO - the concentration of dissolved oxygen in the water (mg/L) * Temp.DO, .CT - the temperature (dC) from the DO or conductivity. * WaterTemp - the water temperature measured from the pressure transducer in the water (dC). * AirTemp - the air temperature measured from the pressure transducer (BP sensor) in the air (dC). * Pressure.press or .BP - the pressure recorded by the pressure transducer (kPa) on the water pressure or barometric pressure sensor. * Z - the depth of the water (cm). * Low_Range_CT - the conductivity read from 0 - 2500 uS/cm (uS/cm) * Full_Range_CT - the conductivity read from 0 - 15000 uS/cm (mmHg) * press.g.cm2 - the pressure from the water pressure sensor (g/cm^2) * BP.g.cm2 - the barometric pressure from the barometric pressure sensor (g/cm^2)</code></pre>
DOI: 10.5281/zenodo.7439174
title: Electron energy loss spectroscopy (EELS) and energy dispersive spectroscopy (EDS) data from two pyroxene grains from Apollo 17 soil 71501

description: This dataset contains hyperspectral EELS and EDS data for two pyroxene grains from Apollo 17 soil 71501 as well as iron oxidation state standards used in the original article "Detection of ferric iron in an exsolved lunar pyroxene using electron energy loss spectroscopy (EELS): Implications for space weathering and redox conditions on the Moon" by Brittany Cymes, Katherine Burgess, and Rhonda Stroud. (doi: 10.1111/maps.13941). The purpose of this dataset is to document chemical characteristics of lunar pyroxenes that can be used to interpret conditions of formation and evaluate chemical changes resultant from the process of space weathering.
description: This work was supported by NASA award 80HQTR19T0057 and NASA award 80NSSC19M0215
DOI: 10.5281/zenodo.7439173
title: Electron energy loss spectroscopy (EELS) and energy dispersive spectroscopy (EDS) data from two pyroxene grains from Apollo 17 soil 71501

description: This dataset contains hyperspectral EELS and EDS data for two pyroxene grains from Apollo 17 soil 71501 as well as iron oxidation state standards used in the original article "Detection of ferric iron in an exsolved lunar pyroxene using electron energy loss spectroscopy (EELS): Implications for space weathering and redox conditions on the Moon" by Brittany Cymes, Katherine Burgess, and Rhonda Stroud. (doi: 10.1111/maps.13941). The purpose of this dataset is to document chemical characteristics of lunar pyroxenes that can be used to interpret conditions of formation and evaluate chemical changes resultant from the process of space weathering.
description: This work was supported by NASA award 80HQTR19T0057 and NASA award 80NSSC19M0215
DOI: 10.18112/openneuro.ds004280.v1.0.1
title: hyper
DOI: 10.5281/zenodo.7434863
title: CIMMYT durum wheat product profiles 2022

description: Detailed target product profiles for CIMMYT durum wheat breeding 2022. The product profiles are the trait specifications for selection and release of material from the four CIMMYT durum wheat breeding pipelines: <em>(1) Amber durum, optimum environment, normal maturity </em>(denoted AD-OW-NM)<em>; (2) Amber durum, high rainfall, normal maturity </em>(denoted AD-HiR-NM)<em>; (3) Amber durum, drought tolerant, normal maturity </em>(denoted AD-DT-NM)<em> and (4) Amber durum, heat tolerant, early maturity </em>(denoted AD-HT-EM). Product profiles are defined as in the Excellence in Breeding Toolbox for “product design and management” (https://excellenceinbreeding.org/toolbox/tools/cgiar-seed-product-market-segment-database). Traits include grain and processing traits, nutritional enhancement, agronomic and disease traits. For winter wheat, no specific production, multiplication, or unique product registration traits apply in 2022 so these fields in the product profiles are marked as not applicable (NA). Traits are listed by category and assigned a measurement scale which is used in selection along with a minimum score. The traits are differentiated by requirement: either as “must have” or “nice to have” as well as the requirement for improvement (vs. maintenance). Indication of a trait as a threshold trait indicates it is a requirement for release of material from the breeding pipeline.
DOI: 10.5281/zenodo.7439208
title: CIMMYT durum wheat product profiles 2022

description: Detailed target product profiles for CIMMYT durum wheat breeding 2022. The product profiles are the trait specifications for selection and release of material from the three CIMMYT durum wheat breeding pipelines: (<em>1) Amber durum, optimum environment, normal maturity (AD-OW-NM)</em>; <em>(2) Amber durum, drought tolerant & input-responsive normal maturity (AD-DTIR-NM) </em>and <em>(3) Amber durum, heat tolerant, early maturity (AD-HT-EM). </em>Product profiles are defined as in the Excellence in Breeding Toolbox for “product design and management” (https://excellenceinbreeding.org/toolbox/tools/cgiar-seed-product-market-segment-database). Traits include grain and processing traits, nutritional enhancement, agronomic and disease traits. For winter wheat, no specific production, multiplication, or unique product registration traits apply in 2022 so these fields in the product profiles are marked as not applicable (NA). Traits are listed by category and assigned a measurement scale which is used in selection along with a minimum score. The traits are differentiated by requirement: either as “must have” or “nice to have” as well as the requirement for improvement (vs. maintenance). Indication of a trait as a threshold trait indicates it is a requirement for release of material from the breeding pipeline.
DOI: 10.5281/zenodo.7434862
title: CIMMYT durum wheat product profiles 2022

description: Detailed target product profiles for CIMMYT durum wheat breeding 2022. The product profiles are the trait specifications for selection and release of material from the three CIMMYT durum wheat breeding pipelines: (<em>1) Amber durum, optimum environment, normal maturity (AD-OW-NM)</em>; <em>(2) Amber durum, drought tolerant & input-responsive normal maturity (AD-DTIR-NM) </em>and <em>(3) Amber durum, heat tolerant, early maturity (AD-HT-EM). </em>Product profiles are defined as in the Excellence in Breeding Toolbox for “product design and management” (https://excellenceinbreeding.org/toolbox/tools/cgiar-seed-product-market-segment-database). Traits include grain and processing traits, nutritional enhancement, agronomic and disease traits. For winter wheat, no specific production, multiplication, or unique product registration traits apply in 2022 so these fields in the product profiles are marked as not applicable (NA). Traits are listed by category and assigned a measurement scale which is used in selection along with a minimum score. The traits are differentiated by requirement: either as “must have” or “nice to have” as well as the requirement for improvement (vs. maintenance). Indication of a trait as a threshold trait indicates it is a requirement for release of material from the breeding pipeline.
DOI: 10.26093/cds/vizier.51580081
title: Low-mass stars from the first two TESS sectors

description: VizieR online Data Catalogue associated with article published in journal Astronomical Journal (AAS) with title 'The independent discovery of planet candidates around low-mass stars and astrophysical false positives from the first two TESS sectors.' (bibcode: 2019AJ....158...81C)
DOI: 10.26093/cds/vizier.51610196
title: An optical overview of blazars with LAMOST. I.

description: VizieR online Data Catalogue associated with article published in journal Astronomical Journal (AAS) with title 'An optical overview of blazars with LAMOST. I. Hunting changing-look blazars and new redshift estimates.' (bibcode: 2021AJ....161..196P)