cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wmhdwz
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Callulops stictogaster (Zweifel, 1972)"
 ]
}

 The dataset includes 59 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047832-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5fruf6
title: Occurrence Download

description: A dataset containing 703 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Criniger olivaceus (Swainson, 1837)"
 ]
}

 The dataset includes 703 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037780-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jrqifr
title: Occurrence Download

description: A dataset containing 897 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-116.56219 48.28766,-116.65009 48.25909,-116.59296 48.05255,-116.5556 47.88995,-116.43256 47.92511,-116.40399 48.013,-116.41937 48.06573,-116.34467 48.11188,-116.22382 48.11188,-116.17987 48.20416,-116.35785 48.31403,-116.44794 48.34479,-116.54242 48.32721,-116.56219 48.28766))",
 "TaxonKey is Actinopterygii"
 ]
}

 The dataset includes 897 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007618-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tz2e9y
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Harmothoe campoglacialis Hilbig & Montiel, 2000",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is MANAGED"
 ]
 }
 },
 {
 "not" : {
 "EstablishmentMeans" : [
 "is not null"
 ]
 }
 }
 ]
 },
 {
 "or" : [
 "OccurrenceStatus is Present",
 {
 "not" : {
 "OccurrenceStatus" : [
 "is not null"
 ]
 }
 }
 ]
 }
 ]
}

 The dataset includes 12 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054214-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fqq8ux
title: Occurrence Download

description: A dataset containing 3659 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Amazona xantholora (G.R.Gray, 1859)"
 ]
}

 The dataset includes 3659 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037845-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cxnasx
title: Occurrence Download

description: A dataset containing 199 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Geohistorical plants occurrences database"
 ]
}

 The dataset includes 199 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008760-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14783094
title: Supplementary data: the GCAM input set-up for 'Omitting labor responses underestimates the effects of future heat stress on agriculture'.

description: This datasets include the additional input files for replicating GCAM runs performed for the study:

Omitting labor responses underestimates the effects of future heat stress on agriculture

Di Sheng*, Xin Zhao*, James A. Edmonds, Pralit Patel, Stephanie T. Waldhoff, Brian C. O’Neill, Claudia Tebaldi, Marshall A. Wise, 

Joint Global Change Research Institute, Pacific Northwest National Laboratory*Corresponding Author. Email: di.sheng@pnnl.gov; xin.zhao@pnnl.gov

The input files work with the modified GCAM model archived here.
DOI: 10.5281/zenodo.14783093
title: Supplementary data: the GCAM input set-up for 'Omitting labor responses underestimates the effects of future heat stress on agriculture'.

description: This datasets include the additional input files for replicating GCAM runs performed for the study:

Omitting labor responses underestimates the effects of future heat stress on agriculture

Di Sheng*, Xin Zhao*, James A. Edmonds, Pralit Patel, Stephanie T. Waldhoff, Brian C. O’Neill, Claudia Tebaldi, Marshall A. Wise, 

Joint Global Change Research Institute, Pacific Northwest National Laboratory*Corresponding Author. Email: di.sheng@pnnl.gov; xin.zhao@pnnl.gov

The input files work with the modified GCAM model archived here.
DOI: 10.5281/zenodo.15177248
title: Data and resources on the population history of the harlequin fly

description: This dataset contains phased vcf files of Chironomus riparius, ouput files of RepeatMasker, RepeatOBserver and MSMC2, such as supporting files. 

For further details also check the GitHub page: https://github.com/lpettrich/Crip_PopulationHistory_Centromere_2025



phased-vcfs: Artificially phased vcf-files of five populations with four individuals each. Needed to generate multihetsep files. Input files for iSMC.



Hesse in Germany =  MG

Rhône-Alpes in France = MF

Lorraine in France = NMF

Piemont in Italy = SI

Andalusia in Spain = SS



multihetsep-files: Created with msmc-tools. Input files for MSMC2. 

RepeatMasker: Raw output of RepeatMasker run. Summary file and file with filtered Cla-element (a transposable element) included.

RepeatOBserver: Summary files on centromere predictions based on histograms and Shannon Diversity from RepeatOBserver. Genome-wise Shannon Diversity per chromosome included. 

MSMC2: Raw ouput of combined cross-coalescence and mean values if MSMC2 per populations.

input-files figures: Supporting files needed to create figures.
DOI: 10.5281/zenodo.15177249
title: Data and resources on the population history of the harlequin fly

description: This dataset contains phased vcf files of Chironomus riparius, ouput files of RepeatMasker, RepeatOBserver and MSMC2, such as supporting files. 

For further details also check the GitHub page: https://github.com/lpettrich/Crip_PopulationHistory_Centromere_2025



phased-vcfs: Artificially phased vcf-files of five populations with four individuals each. Needed to generate multihetsep files. Input files for iSMC.



Hesse in Germany =  MG

Rhône-Alpes in France = MF

Lorraine in France = NMF

Piemont in Italy = SI

Andalusia in Spain = SS



multihetsep-files: Created with msmc-tools. Input files for MSMC2. 

RepeatMasker: Raw output of RepeatMasker run. Summary file and file with filtered Cla-element (a transposable element) included.

RepeatOBserver: Summary files on centromere predictions based on histograms and Shannon Diversity from RepeatOBserver. Genome-wise Shannon Diversity per chromosome included. 

MSMC2: Raw ouput of combined cross-coalescence and mean values if MSMC2 per populations.

input-files figures: Supporting files needed to create figures.
DOI: 10.15468/dl.b37mrd
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Insecta)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((165 7.5,172.5 7.5,172.5 15,165 15,165 7.5))"
 ]
}

 The dataset includes 58 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042314-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccrrnx1
title: CCDC 707944: Experimental Crystal Structure Determination

description: Related Article: C.Mendoza, J.Benet-Buchholz, M.A.Pericas, R.Vilar|2009|Dalton Trans.||2974|doi:10.1039/b819612e
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.35445.09448/1
title: Sri Lanka Vehicle Prices Dataset
DOI: 10.5517/ccryg26
title: CCDC 713498: Experimental Crystal Structure Determination

description: Related Article: S.Gomez-Ruiz, B.Gallego, E.Hey-Hawkins|2009|Dalton Trans.||2915|doi:10.1039/b822675j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccrz685
title: CCDC 714217: Experimental Crystal Structure Determination

description: Related Article: C.Mendoza, J.Benet-Buchholz, M.A.Pericas, R.Vilar|2009|Dalton Trans.||2974|doi:10.1039/b819612e
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccryg37
title: CCDC 713499: Experimental Crystal Structure Determination

description: Related Article: S.Gomez-Ruiz, B.Gallego, E.Hey-Hawkins|2009|Dalton Trans.||2915|doi:10.1039/b822675j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.14159.00169
title: PÉRIER index d'ouvrage
DOI: 10.13140/rg.2.2.14578.43202
title: E Poster Retina (Surgical)
DOI: 10.5517/ccryg48
title: CCDC 713500: Experimental Crystal Structure Determination

description: Related Article: S.Gomez-Ruiz, B.Gallego, E.Hey-Hawkins|2009|Dalton Trans.||2915|doi:10.1039/b822675j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccryg59
title: CCDC 713501: Experimental Crystal Structure Determination

description: Related Article: S.Gomez-Ruiz, B.Gallego, E.Hey-Hawkins|2009|Dalton Trans.||2915|doi:10.1039/b822675j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.16915369
title: Data Release: The Effects of Linear Matter Power Spectrum Enhancement on Dark Matter Substructure

description: Enhanced P(k) Simulation Data

-- Files are labeled by the host halo number and presence/absence of a bump ("bump") or cutoff ("cutoff") in the linear matter power spectrum, e.g. Halo004_Tkd_T_vd100_*.tar-- halos.tar files include the z = 0 Rockstar halo list and the consistent-trees merger tree files 

-- particles.tar files include the z = 0 Gadget-2 snapshot blocks

-- sim_data_enhanced_16K.bin contains the host halo main branch (entry 0), isolated halos (entry 1), and subhalos (entry 2) for all models.

-- All data is at the high resolution presented in Nadler, Gluscevic, & Benson (2025) (particle mass 5e4 Msun, softening 80 pc/h)

-- A spreadsheet with information for each simulation can be found here.

-- Related data products can be found here: COZMIC I (10.5281/zenodo.14649137), COZMIC II (10.5281/zenodo.14663119), COZMIC III (10.5281/zenodo.14666735)
description: Acknowledgments and Citation instructions

If you use this dataset in any way, please cite the following references: 

Nadler, Gluscevic, & Benson (2025a)  \cite{2025arXiv250716889N}, and the Zenodo dataset

Nadler, Gluscevic, & Benson (2025b) \cite{nadler_2025_16915369}

@ARTICLE{2025arXiv250716889N, author = {{Nadler}, Ethan O. and {Gluscevic}, Vera and {Benson}, Andrew}, title = "{The Effects of Linear Matter Power Spectrum Enhancement on Dark Matter Substructure}", journal = {arXiv e-prints}, keywords = {Cosmology and Nongalactic Astrophysics, Astrophysics of Galaxies}, year = 2025, month = jul, eid = {arXiv:2507.16889}, pages = {arXiv:2507.16889}, doi = {10.48550/arXiv.2507.16889}, archivePrefix = {arXiv}, eprint = {2507.16889}, primaryClass = {astro-ph.CO}, adsurl = {https://ui.adsabs.harvard.edu/abs/2025arXiv250716889N}, adsnote = {Provided by the SAO/NASA Astrophysics Data System} } 

@dataset{nadler_2025_16915369, author = {Nadler, Ethan and Gluscevic, Vera and Benson, Andrew}, title = {Data Release: The Effects of Linear Matter Power Spectrum Enhancement on Dark Matter Substructure }, month = aug, year = 2025, publisher = {Zenodo}, doi = {10.5281/zenodo.16915369}, url = {https://doi.org/10.5281/zenodo.16915369}, }
DOI: 10.5281/zenodo.16915368
title: Data Release: The Effects of Linear Matter Power Spectrum Enhancement on Dark Matter Substructure

description: Enhanced P(k) Simulation Data

-- Files are labeled by the host halo number and presence/absence of a bump ("bump") or cutoff ("cutoff") in the linear matter power spectrum, e.g. Halo004_Tkd_T_vd100_*.tar-- halos.tar files include the z = 0 Rockstar halo list and the consistent-trees merger tree files 

-- particles.tar files include the z = 0 Gadget-2 snapshot blocks

-- sim_data_enhanced_16K.bin contains the host halo main branch (entry 0), isolated halos (entry 1), and subhalos (entry 2) for all models.

-- All data is at the high resolution presented in Nadler, Gluscevic, & Benson (2025) (particle mass 5e4 Msun, softening 80 pc/h)

-- A spreadsheet with information for each simulation can be found here.

-- Related data products can be found here: COZMIC I (10.5281/zenodo.14649137), COZMIC II (10.5281/zenodo.14663119), COZMIC III (10.5281/zenodo.14666735)
description: Acknowledgments and Citation instructions

If you use this dataset in any way, please cite the following references: 

Nadler, Gluscevic, & Benson (2025a)  \cite{2025arXiv250716889N}, and the Zenodo dataset

Nadler, Gluscevic, & Benson (2025b) \cite{nadler_2025_16915369}

@ARTICLE{2025arXiv250716889N, author = {{Nadler}, Ethan O. and {Gluscevic}, Vera and {Benson}, Andrew}, title = "{The Effects of Linear Matter Power Spectrum Enhancement on Dark Matter Substructure}", journal = {arXiv e-prints}, keywords = {Cosmology and Nongalactic Astrophysics, Astrophysics of Galaxies}, year = 2025, month = jul, eid = {arXiv:2507.16889}, pages = {arXiv:2507.16889}, doi = {10.48550/arXiv.2507.16889}, archivePrefix = {arXiv}, eprint = {2507.16889}, primaryClass = {astro-ph.CO}, adsurl = {https://ui.adsabs.harvard.edu/abs/2025arXiv250716889N}, adsnote = {Provided by the SAO/NASA Astrophysics Data System} } 

@dataset{nadler_2025_16915369, author = {Nadler, Ethan and Gluscevic, Vera and Benson, Andrew}, title = {Data Release: The Effects of Linear Matter Power Spectrum Enhancement on Dark Matter Substructure }, month = aug, year = 2025, publisher = {Zenodo}, doi = {10.5281/zenodo.16915369}, url = {https://doi.org/10.5281/zenodo.16915369}, }
DOI: 10.5517/ccs2s1n
title: CCDC 717651: Experimental Crystal Structure Determination

description: Related Article: S.Ishida, K.Yoshimura, H.Matsumoto, S.Kyushin|2009|Chem.Lett.|38|362|doi:10.1246/cl.2009.362
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccs40fb
title: CCDC 718841: Experimental Crystal Structure Determination

description: Related Article: S.Kyushin, K.Yoshimura, K.Sato, H.Matsumoto|2009|Chem.Lett.|38|324|doi:10.1246/cl.2009.324
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.34475.16169
title: Tổng quan các nghiên cứu về chủ đề Mobile banking tại Việt Nam trên Google scholar
DOI: 10.5517/ccqy5g8
title: CCDC 683440: Experimental Crystal Structure Determination

description: Related Article: R.Ito, Y.Kakihana, Y.Kawakami|2009|Chem.Lett.|38|364|doi:10.1246/cl.2009.364
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccrchsc
title: CCDC 696253: Experimental Crystal Structure Determination

description: Related Article: Y.Yoshida, R.Miyamoto, T.Nishioka, H.Hashimoto, I.Kinoshita|2009|Chem.Lett.|38|366|doi:10.1246/cl.2009.366
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccs6msc
title: CCDC 721363: Experimental Crystal Structure Determination

description: Related Article: T.Ito, T.Yamase|2009|Chem.Lett.|38|370|doi:10.1246/cl.2009.370
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccrv591
title: CCDC 710343: Experimental Crystal Structure Determination

description: Related Article: R.Ookura, K.Kito, Y.Saito, T.Kusumi, T.Ooi|2009|Chem.Lett.|38|384|doi:10.1246/cl.2009.384
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccs6kvc
title: CCDC 721303: Experimental Crystal Structure Determination

description: Related Article: N.Nakata, S.Yamamoto, W.Hashima, A.Ishii|2009|Chem.Lett.|38|400|doi:10.1246/cl.2009.400
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.27187.55849
title: شكر وتقدير عن المشاركة في المسابقة الدينية التي إقامتها قناة التطوير الذاتي بتاريخ 16 / 10 / 2021
DOI: 10.13140/rg.2.2.35051.87845
title: HCL, HSV and HSL 3D Visualization (MATLAB Code)
DOI: 10.5517/ccs6kwd
title: CCDC 721304: Experimental Crystal Structure Determination

description: Related Article: N.Nakata, S.Yamamoto, W.Hashima, A.Ishii|2009|Chem.Lett.|38|400|doi:10.1246/cl.2009.400
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.13140/rg.2.2.27207.21924/3
title: Conserved regions identifier for Primer designing in PCR, RT-PCR, qPCR, RT-qPCR and NGS library development purposes using Python
DOI: 10.5517/ccrkl3z
title: CCDC 702091: Experimental Crystal Structure Determination

description: Related Article: T.Mukai, K.Nishikawa|2009|Chem.Lett.|38|402|doi:10.1246/cl.2009.402
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccrkl40
title: CCDC 702092: Experimental Crystal Structure Determination

description: Related Article: T.Mukai, K.Nishikawa|2009|Chem.Lett.|38|402|doi:10.1246/cl.2009.402
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccrryxb
title: CCDC 708223: Experimental Crystal Structure Determination

description: Related Article: T.Kojima, J.Nishida, S.Tokito, Y.Yamashita|2009|Chem.Lett.|38|428|doi:10.1246/cl.2009.428
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.