cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/tdv8ns7hcp.2
title: DataSet 1: Prdm9 and meiotic cohesin proteins cooperatively promote DNA double-strand break formation in mammalian spermatocytes. Bhattacharyya et al.
DOI: 10.17632/nr4dxt9dbj.1
title: The endemism of non-sticky costs

description: The data contains accounting information for industrial firms of the GCC countries.
DOI: 10.17632/v9bmvzfk9r.1
title: Introduction to spectroscopy shape theory for tuning visible/near-IR conducting oxide nanofilms.
DOI: 10.17632/2ffvcbct3r.1
title: Supplementary data for article "Genome surveillance explains the global discrepancy between binding and effect of chromatin factors " by Singh et al

description: Mapped datasets for the article "Supplementary data for article "Genome surveillance explains the global discrepancy between binding and effect of chromatin factors " by Singh et al [Yet to be published]
DOI: 10.17632/79gx2sczhb.2
title: High-throughput sequencing of Epidermolysis Bullosa- and Epidermolytic Ichthyosis-associated genomic regions in primary keratinocytes (Ion Torrent amplicon panel)

description: We developed a comprehensive AmpliSeq panel for NGS analysis of EB and EI-asociated genomic loci. These included mutation hotspots and predicted off-target sites for gene editing agents. Some of the data generated was used to analyse the off-target and on-target capabilities of a KRT10-specific TALEN (6.21) in the development of a gene editing therapeutic option for Epidermolytic Ichthyosis. In this study, the KRT10 on-target 17q21.2 (KRT10 exon 6) and 8 in silico predicted off-targets 4q12 (non-coding), 6q21 (non-coding), 6p22.1 (non-coding), 4q31.3 (FHDC1 intron 6), 1p21 (non-coding), 2p25 (non-coding), 5q15 (non-coding), 1p36.3 (non-coding) were analysed. Other genomic loci were included on the amplicon panel. Although these were not analysed in this study, they are included in the provided metadata. NGS data was assessed in primary patient keratinocytes (Prim_EI_Unmodified) and TALEN-treated primary patient keratinocytes (Prim_EI_T6.21). Other samples were included on the amplicon panel, but are not in the provided metadata. Despite high on-target activity, TALEN 6.21 activity was not observed at off-target sites.
DOI: 10.17632/wcgbsgsfdg.1
title: FAR, FRR, FTC, EER, DATA OF AITAM COLLEGE DATA_SET

description: FAR, FRR, FTC, EER, DATA OF DIFFERENT FINGERS,FACES AND VOICE FROM AITAM COLLEGE DATA_SET
DOI: 10.17632/wntw75msnf.2
title: High-throughput sequencing of Epidermolysis Bullosa- and Epidermolytic Ichthyosis-associated genomic regions in immortalised keratinocytes (Ion Torrent amplicon panel)

description: We developed a comprehensive AmpliSeq panel for NGS analysis of EB and EI-asociated genomic loci. These included mutation hotspots and predicted off-target sites for gene editing agents. Some of the data generated was used to analyse the off-target and on-target capabilities of a KRT10-specific TALEN (6.21) in the development of a gene editing therapeutic option for Epidermolytic Ichthyosis. In this study, the KRT10 on-target 17q21.2 (KRT10 exon 6) and 8 in silico predicted off-targets 4q12 (non-coding), 6q21 (non-coding), 6p22.1 (non-coding), 4q31.3 (FHDC1 intron 6), 1p21 (non-coding), 2p25 (non-coding), 5q15 (non-coding), 1p36.3 (non-coding) were analysed. Other genomic loci were included on the amplicon panel. Although these were not analysed in this study, they are included in the provided metadata. NGS data was assessed in immortalised patient keratinocytes (EH31_Unmodified), TALEN-treated immortalised patient keratinocytes (EH31_T6.21) and a single cell clone derived from TALEN-treated immortalised patient keratinocytes (EH31_T6.21_AH2). Other samples were included on the amplicon panel, but are not in the provided metadata. Despite high on-target activity, TALEN 6.21 activity was not observed at off-target sites.
DOI: 10.5281/zenodo.2558202
title: BAMB Materials Passport Platform Dataset

description: The BAMB Materials Passport Platform Dataset contains the platform´s full data used to create material passports during the Buildings as Material Banks Project (BAMB) by the work package 2 team from September 2015 until February 2018.
description: This publication was part of the Buildings As Material Banks (BAMB) project which has received funding from the European Union (EU) Horizon 2020 research and innovation programme under grant number 642384.
DOI: 10.5281/zenodo.2579777
title: Illustrative Darwin core archive to input data on a citizen science platform from a collection management system

description: Illustrative DwC archive to send data from a collection management system to a citizen sciences platform. This illustrative archive displays the specimens used for the trans-institutional and trans-platform pilot project held in the frame of ICEDIG.

Further description of its content in the milestone28 document, worpackage 5.2 of the ICEDIG project.
DOI: 10.5281/zenodo.2579778
title: Illustrative Darwin core archive to input data on a citizen science platform from a collection management system

description: Illustrative DwC archive to send data from a collection management system to a citizen sciences platform. This illustrative archive displays the specimens used for the trans-institutional and trans-platform pilot project held in the frame of ICEDIG.

Further description of its content in the milestone28 document, worpackage 5.2 of the ICEDIG project.
DOI: 10.5281/zenodo.2558201
title: BAMB Materials Passport Platform Dataset

description: The BAMB Materials Passport Platform Dataset contains the platform´s full data used to create material passports during the Buildings as Material Banks Project (BAMB) by the work package 2 team from September 2015 until February 2018.
description: This publication was part of the Buildings As Material Banks (BAMB) project which has received funding from the European Union (EU) Horizon 2020 research and innovation programme under grant number 642384.
DOI: 10.5281/zenodo.2579606
title: Postprocessed output from VR-CESM with refinement over the greater Greenland area and a CAM-SE control experiment

description: This dataset contains post-processed monthly output from two VR-CESM simulations that were performed with CAM5.4 and CLM5, with refinement patches over the greater Greenland area. Data from a standard, quasi-uniform CAM-SE simulations is included as well. These are the data that are analysed and discussed by our paper in The Cryosphere, https://www.the-cryosphere-discuss.net/tc-2018-257/.

The postprocessing involved (A) regridding from the respective unstructured CAM grids to regular latitude-longitude grids to allow for easy plotting and comparison, (B) vertical interpolation of some atmospheric fields to constant pressure levels, and (C) averaging in time to compute climatological means and variances.

<strong>Contact</strong><br>
Leo van Kampenhout (L.vankampenhout@uu.nl)

<strong>Raw data</strong><br>
The raw, ungridded monthly timeseries data are currently available on NCAR's HPSS tape system, under file path /home/lvank/archive_pp, and can be requested through the contact person. There exists also daily data for selected variables.

<strong>Dataset contents</strong>

<pre><code>Global_Uniform.tar
Global_VR28.tar
Global_VR55.tar</code></pre>

Atmospheric CAM output regridded to a global regular 1 degree latitude-longitude grid. Variables are PHIS, T200, T500, T700, Z200, Z500, Z700.

<pre><code>Greenland_0.25_Uniform.tar
Greenland_0.25_VR28.tar
Greenland_0.25_VR55.tar</code></pre>

Atmospheric CAM output and CLM land model output regridded to a 0.25x0.25 degree grid stretching from 40N - 90N and 100W - 0W. Variables are FLDS, FLNS, FSDS, FSNS, H2OSNO, LHFLX, SHFLX, PHIS, PRECC, PRECL, PRECSC, PRECSL, TGCLDCWP, TREFHT, TSOI_10CM, TS, U10.

<pre><code>acab_c2b8_UNI_fdm.004_timmean.nc
acab_c2b8_VRGRN_28.005_timmean.nc
acab_c2b8_VRGRN_55.005_timmean.nc</code></pre>

Downscaled SMB on the 4km CISM grid, in meters of ice equivalent. These files represent time means over the period 1980-1999.

<pre><code> cism_thickness.nc </code></pre>

CISM ice thickness and ice elevation at 4 km. Note that the ice sheet was non-evolving in our simulations, so both these fields are constant in time.
DOI: 10.5281/zenodo.2579605
title: Postprocessed output from VR-CESM with refinement over the greater Greenland area and a CAM-SE control experiment

description: This dataset contains post-processed monthly output from two VR-CESM simulations that were performed with CAM5.4 and CLM5, with refinement patches over the greater Greenland area. Data from a standard, quasi-uniform CAM-SE simulations is included as well. These are the data that are analysed and discussed by our paper in The Cryosphere, https://www.the-cryosphere-discuss.net/tc-2018-257/.

The postprocessing involved (A) regridding from the respective unstructured CAM grids to regular latitude-longitude grids to allow for easy plotting and comparison, (B) vertical interpolation of some atmospheric fields to constant pressure levels, and (C) averaging in time to compute climatological means and variances.

<strong>Contact</strong><br>
Leo van Kampenhout (L.vankampenhout@uu.nl)

<strong>Raw data</strong><br>
The raw, ungridded monthly timeseries data are currently available on NCAR's HPSS tape system, under file path /home/lvank/archive_pp, and can be requested through the contact person. There exists also daily data for selected variables.

<strong>Dataset contents</strong>

<pre><code>Global_Uniform.tar
Global_VR28.tar
Global_VR55.tar</code></pre>

Atmospheric CAM output regridded to a global regular 1 degree latitude-longitude grid. Variables are PHIS, T200, T500, T700, Z200, Z500, Z700.

<pre><code>Greenland_0.25_Uniform.tar
Greenland_0.25_VR28.tar
Greenland_0.25_VR55.tar</code></pre>

Atmospheric CAM output and CLM land model output regridded to a 0.25x0.25 degree grid stretching from 40N - 90N and 100W - 0W. Variables are FLDS, FLNS, FSDS, FSNS, H2OSNO, LHFLX, SHFLX, PHIS, PRECC, PRECL, PRECSC, PRECSL, TGCLDCWP, TREFHT, TSOI_10CM, TS, U10.

<pre><code>acab_c2b8_UNI_fdm.004_timmean.nc
acab_c2b8_VRGRN_28.005_timmean.nc
acab_c2b8_VRGRN_55.005_timmean.nc</code></pre>

Downscaled SMB on the 4km CISM grid, in meters of ice equivalent. These files represent time means over the period 1980-1999.

<pre><code> cism_thickness.nc </code></pre>

CISM ice thickness and ice elevation at 4 km. Note that the ice sheet was non-evolving in our simulations, so both these fields are constant in time.
DOI: 10.5281/zenodo.2579781
title: Illustrative Darwin core archive to output data from a citizen science platform to a collection management system

description: Illustrative DwC archive to send data back to a collection management system from a citizen sciences platform. This illustrative archive displays the specimens used for the trans-institutional and trans-platform pilot project held in the frame of ICEDIG.

Further description of its content in the milestone28 document, worpackage 5.2 of the ICEDIG project.
DOI: 10.5281/zenodo.2579782
title: Illustrative Darwin core archive to output data from a citizen science platform to a collection management system

description: Illustrative DwC archive to send data back to a collection management system from a citizen sciences platform. This illustrative archive displays the specimens used for the trans-institutional and trans-platform pilot project held in the frame of ICEDIG.

Further description of its content in the milestone28 document, worpackage 5.2 of the ICEDIG project.
DOI: 10.5281/zenodo.2579750
title: Muskox body temperature and activity data

description: Data on muskox (<em>Ovibos moschatus</em>) body temperature (°C) and activity (count) from Zackenberg in Northeast Greenland collected every 4 hours during the period from autumn 2017 to autumn 2018.
description: Additional data added
DOI: 10.5281/zenodo.2575710
title: Tanguro-Flux Data

description: Tanguro (Brasil)

<strong>Location</strong>

Tropical control forest and farmland (soy beans)

Latitude -13.08 , Longitude -52.39

<strong>Overview</strong>


	Periods: June 2016 and January 2017
	Eddy covariance
	Meteorology
	Derived turbulent fluxes from thermodynamics (Kleidon A., Thermodynamic Foundations of the Earth System, 2016, Cambridge Univ. Press)


<strong>Description</strong>

Data from two new Eddy flux stations in Ribeirão Tanguro, Matto Grosso, Brazil. One in an unmanaged forest (control site) and another one on a farmland (soy beans). They are equipped with the usual sensors for meteorology and Eddy covariance measurements and are powered by solar stations. The towers belong to a joint project with the Brazilian Institute for Amazon Research (IPAM) to manipulate the carbon use efficiency of tropical forest. More information on projects, collaborations and facilities can be found here: https://www.bgc-jena.mpg.de/Freiland/index.php/Sites/BrazilTanguro

<strong>Variables & Instruments</strong>

<strong><em>Fluxes</em></strong>


	Eddy covariance - water vapor, heat (USA-1, LI7200)
	Derived turbulent fluxes from the thermodynamic maximum power principle (Kleidon, 2016)


<strong><em>Meteorology</em></strong>


	Air temperature and humidity - temperature-humidity-sensor KPK1_5-ME, Mela
	Solar radiation - net radiometer CNR1, Kipp & Zonen
	Terrestrial radiation - net radiometer CNR1, Kipp & Zonen


<strong><em>Soil conditions</em></strong>


	Soil heat flux - soil heat flux plates HP3/CN3, Rimco


<strong><em>Data acquisition</em></strong>


	Meteorological data - datalogger CR1000, Campbell Scientific
	Flux data - notebook
DOI: 10.17632/cf65mywnsf.1
title: Data for: Projected Climate Change Impacts on Future Streamflow of the Yarlung Tsangpo-Brahmaputra River

description: Daily processes and monthly processes of observed streamflow and simulated streamflow forced by WFD and native/corrected RCMs during historical period at Bahadurabad.
DOI: 10.17632/trb5h74j34.1
title: Data for: Hormonal predictors of women’s sexual motivation

description: Dataset for "Hormonal predictors of women's sexual motivation"
DOI: 10.5281/zenodo.2579578
title: main source codes and files of "Meta-path Based Prioritization of Functional Drug Actions with Multi-Level Biological Networks"

description: These source codes and their related files are associated the study. "Meta-path Based Prioritization of Functional Drug Actions with Multi-Level Biological Networks"

This study is in process of publication.
description: source codes
related files
DOI: 10.5281/zenodo.2579579
title: main source codes and files of "Meta-path Based Prioritization of Functional Drug Actions with Multi-Level Biological Networks"

description: These source codes and their related files are associated the study. "Meta-path Based Prioritization of Functional Drug Actions with Multi-Level Biological Networks"

This study is in process of publication.
description: source codes
related files
DOI: 10.25606/surf.578c6039-5120b75b
title: The Cosmogrid Simulation: Statistical Properties of Small Dark Matter Halos (1024-049)

description: We present the results of the "Cosmogrid" cosmological N-body simulation suites based on the concordance LCDM model. The Cosmogrid simulation was performed in a 30 Mpc box with 2048³ particles. The mass of each particle is 1.28x10^5 Msun, which is sufficient to resolve ultra-faint dwarfs. We found that the halo mass function shows good agreement with the Sheth & Tormen fitting function down to ~10^7 Msun. We have analyzed the spherically averaged density profiles of the three most massive halos which are of galaxy group size and contain at least 170 million particles. The slopes of these density profiles become shallower than -1 at the inner most radius. We also find a clear correlation of halo concentration with mass. The mass dependence of the concentration parameter cannot be expressed by a single power law, however a simple model based on the Press-Schechter theory proposed by Navarro et al. gives reasonable agreement with this dependence. The spin parameter does not show a correlation with the halo mass. The probability distribution functions for both concentration and spin are well fitted by the log-normal distribution for halos with the masses larger than ~10^8 Msun. The subhalo abundance depends on the halo mass. Galaxy-sized halos have 50% more subhalos than ~10^11 Msun halos have. This is snapshot 049 of the 1024³ resolution collection.
DOI: 10.25606/surf.578c6039-f901e065
title: The Cosmogrid Simulation: Statistical Properties of Small Dark Matter Halos (1024-048)

description: We present the results of the "Cosmogrid" cosmological N-body simulation suites based on the concordance LCDM model. The Cosmogrid simulation was performed in a 30 Mpc box with 2048³ particles. The mass of each particle is 1.28x10^5 Msun, which is sufficient to resolve ultra-faint dwarfs. We found that the halo mass function shows good agreement with the Sheth & Tormen fitting function down to ~10^7 Msun. We have analyzed the spherically averaged density profiles of the three most massive halos which are of galaxy group size and contain at least 170 million particles. The slopes of these density profiles become shallower than -1 at the inner most radius. We also find a clear correlation of halo concentration with mass. The mass dependence of the concentration parameter cannot be expressed by a single power law, however a simple model based on the Press-Schechter theory proposed by Navarro et al. gives reasonable agreement with this dependence. The spin parameter does not show a correlation with the halo mass. The probability distribution functions for both concentration and spin are well fitted by the log-normal distribution for halos with the masses larger than ~10^8 Msun. The subhalo abundance depends on the halo mass. Galaxy-sized halos have 50% more subhalos than ~10^11 Msun halos have. This is snapshot 048 of the 1024³ resolution collection.
DOI: 10.5517/ccdc.csd.cc20rc8f
title: CCDC 1869494: Experimental Crystal Structure Determination

description: Related Article: Michael Bachmann, Reto Fessler, Olivier Blacque, Koushik Venkatesan|2019|Dalton Trans.|48|7320|doi:10.1039/C8DT05034A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20rc9g
title: CCDC 1869495: Experimental Crystal Structure Determination

description: Related Article: Michael Bachmann, Reto Fessler, Olivier Blacque, Koushik Venkatesan|2019|Dalton Trans.|48|7320|doi:10.1039/C8DT05034A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.17632/v4dhh3hfkz.1
title: Data for: Effect of nanocelluloses on the microstructure and mechanical performance of CAC cementitious matrices

description: ANOVA Analysis of the results
DOI: 10.5517/ccdc.csd.cc20rcbh
title: CCDC 1869496: Experimental Crystal Structure Determination

description: Related Article: Michael Bachmann, Reto Fessler, Olivier Blacque, Koushik Venkatesan|2019|Dalton Trans.|48|7320|doi:10.1039/C8DT05034A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20rccj
title: CCDC 1869497: Experimental Crystal Structure Determination

description: Related Article: Michael Bachmann, Reto Fessler, Olivier Blacque, Koushik Venkatesan|2019|Dalton Trans.|48|7320|doi:10.1039/C8DT05034A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20rcdk
title: CCDC 1869498: Experimental Crystal Structure Determination

description: Related Article: Michael Bachmann, Reto Fessler, Olivier Blacque, Koushik Venkatesan|2019|Dalton Trans.|48|7320|doi:10.1039/C8DT05034A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20rcfl
title: CCDC 1869499: Experimental Crystal Structure Determination

description: Related Article: Michael Bachmann, Reto Fessler, Olivier Blacque, Koushik Venkatesan|2019|Dalton Trans.|48|7320|doi:10.1039/C8DT05034A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20rcgm
title: CCDC 1869500: Experimental Crystal Structure Determination

description: Related Article: Michael Bachmann, Reto Fessler, Olivier Blacque, Koushik Venkatesan|2019|Dalton Trans.|48|7320|doi:10.1039/C8DT05034A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20rchn
title: CCDC 1869501: Experimental Crystal Structure Determination

description: Related Article: Michael Bachmann, Reto Fessler, Olivier Blacque, Koushik Venkatesan|2019|Dalton Trans.|48|7320|doi:10.1039/C8DT05034A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20rcjp
title: CCDC 1869502: Experimental Crystal Structure Determination

description: Related Article: Michael Bachmann, Reto Fessler, Olivier Blacque, Koushik Venkatesan|2019|Dalton Trans.|48|7320|doi:10.1039/C8DT05034A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.