cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21587370.v1
title: S1. AT ECS primers and sequences.docx

description: S1. Primers used in quantitative real-time PCR to detect gene expression levels of ECS-related genes in adipocytes and pre-adipocytes of dairy cows.
DOI: 10.6084/m9.figshare.27179868.v1
title: <b>Strategic Honey Bee Hive Placement Improves Honey Bee Visitation but not Pollination in Northern Highbush Blueberry</b>

description: Commercial blueberry <i>Vaccinium</i> spp. (Ericales: Ericaceae) production relies on insect-mediated pollination. Pollination is mostly provided by rented honey bees, <i>Apis mellifera </i>L. (Hymenoptera: Apidae), but blueberry crop yields can be limited due to pollination deficits. Various hive placement strategies have been recommended to mitigate pollination shortfalls, but the effect of hive placement has received limited formal investigation. This study explores the effects of clumped and dispersed hive placement strategies on honey bee visitation and pollination outcomes in ‘Bluecrop’ and ‘Duke’ fields over two years (2021 and 2022) within two economically important regions of production in the United States – the Midwest (Michigan) and Pacific Northwest (Oregon and Washington). Clumping hives consistently increased honey bee visitation rate but did not result in higher fruit set, fruit weight, and seed count. Increases in honey bee visitation through clumping could perhaps improve pollination outcomes in more pollination-limited blueberry cultivars and other pollination-dependent crops. Clumping hives is substantially more efficient and cost-effective for beekeepers due to fewer drop locations and could lead to cost savings for both beekeepers and blueberry growers without growers sacrificing pollination levels and crop yields.
DOI: 10.6084/m9.figshare.13324529.v1
title: A Genome-Wide Association Study Reveals Additive and Dominant Effects on Growth Traits in Large White Pigs

description: The dominant effect is a kind of non-additive effects due to the interaction between alleles at the same locus. Quantitative traits such as growth traits in farm animals have been found to be influenced by dominance effects. However, dominance effects are usually ignored in the GWAS of complex traits for farm animals. In this study, we performed GWAS and genetic parameters estimation for two growth traits adjusted age at 100 kg (AGE) and adjusted backfat thickness at 100 kg (BF) of 4,328 Large White pigs. Our results showed significant non-zero variances for dominance effects to these two growth traits. Using a GWAS model accounting both additive and dominance effects, we identified seven additive and two dominance significant SNPs for AGE. For BF, seven genome-wide significant additive SNPs were detected, and no significant SNP was found for dominance effects. Meanwhile, we identified a candidate gene CPPED1 associated with AGE near a dominance association signal. Additionally, seven important functional genes were further identified to be associated with AGE or BF. Overall, the newly detected significant SNPs and newly identified candidate genes in our study have the potential to be applied to the future pig breeding program.
DOI: 10.17632/6tcymb355c
title: Data for: Resolving Cross-site Scripting Attacks through Genetic Algorithm and Reinforcement Learning
DOI: 10.6084/m9.figshare.1293020.v2
title: Correction to "Arabidopsis RNA-Dependent RNA Polymerases and Dicer-Like Proteins in Antiviral Defense and Small Interfering RNA Biogenesis during Turnip Mosaic Virus Infection" by Garcia-Ruiz et al., 2010

description: The figure depicted in the file Garcia-Ruiz_et_al_2010_PlantCell_Fig3-Corrected.jpg is a corrected version of Figure 3 originally published in Garcia-Ruiz et al., 2010 http://dx.doi.org/10.1105/tpc.109.073056 at The Plant Cell (http://www.plantcell.org), copyright American Society of Plant Biologists. In the original manuscript we determined that the immunoblot panel in Figure 3A does not correspond with the actual experiment that was run. Rather, the panel used corresponds to a blot from a different sample set that was used for Figure 3B. In tracing down the cause of the error, we determined that it occurred during final figure construction in which we used an incorrect blot panel from the same experiment. The file Garcia-Ruiz_et_al_2010_PlantCell_Fig3-Corrected.jpg now shows the correct blog image. For full transparency we are providing scans of the full coat protein blot films for Figure 3A and B. In the file Garcia-Ruiz_et_al_2010_PlantCell_Exp30-G1F-10Sec.tif, the left side of the blot has the samples for the inoculated leaf 7 days after infection (DAI) experiment (Figure 3A). The right side of the blot has unrelated samples that were not used in the experiment. In the file Garcia-Ruiz_et_al_2010_PlantCell_Exp30-G2F-15Sec.tif, the left side of the blot has the samples for the inflorescence 7 DAI experiment (Figure 3B). The right side of the blot has the samples for the inflorescence 15 DAI experiment (Figure 3B). We have contacted The Plant Cell regarding the error and submitted the corrected figure. We apologize for the mistake and regret that it was not detected prior to publication.
DOI: 10.6084/m9.figshare.19095626.v1
title: Supplementary Material for: Muscle Mass and Inflammation in Older Adults: Impact of the Metabolic Syndrome

description: <b><i>Background:</i></b> Inflammatory processes are a cause of accelerated loss of muscle mass. Metabolic syndrome (MetS) is a highly prevalent age-related condition, which may promote and be promoted by inflammation. However, whether inflammation in MetS (metaflammation) is associated with lower muscle mass is still unclear. <b><i>Methods:</i></b> Complete cross-sectional data on body composition, MetS, and the inflammatory markers interleukin (IL)-1β, IL-6, IL-10, tumor necrosis factor (TNF), and C-reactive protein (CRP) were available for 1,377 BASE-II participants (51.1% women; 68 ± 4 years old). Appendicular lean mass (ALM) was assessed by dual-energy X-ray absorptiometry. Low muscle mass (low ALM-to-BMI ratio [ALMBMI]) was defined according to the Foundation for the National Institutes of Health (FNIH) Sarcopenia Project. Regression models, adjusted for an increasing number of confounders (sex, age, physical activity, morbidities, diabetes mellitus type II, TSH, albumin, HbA1c, smoking habits, alcohol intake, education, and energy intake/day), were used to calculate the association between low ALMBMI and high inflammation (tertile 3) according to MetS. <b><i>Results:</i></b> MetS was present in 36.2% of the study population, and 9% had low ALMBMI. In the whole study population, high CRP (odds ratio [OR]: 2.7 [95% CI: 1.6–4.7; <i>p</i> = 0.001]) and high IL-6 (OR: 2.1 [95% CI: 1.2–1.9; <i>p</i> = 0.005]) were associated with low ALMBMI. In contrast, no significant association was found between TNF, IL-10, or IL-1β with low ALMBMI. When participants were stratified by MetS, results for IL-6 remained significant only in participants with MetS. <b><i>Conclusions:</i></b> Among BASE-II participants, low ALMBMI was associated with inflammation. Low-grade inflammation triggered by disease state, especially in the context of MetS, might favor loss of muscle mass, so a better control of MetS might help to prevent sarcopenia. Intervention studies to test whether strategies to prevent MetS might also prevent loss of muscle mass seem to be promising.
DOI: 10.17632/ygpns9728k
title: Dataset of hardworking professionals in the Meta department in Colombia

description: This dataset considers some socioeconomic variables of professional individuals working in the Meta department in Colombia. They have been randomly simulated for use as a teaching resource in the learning of concepts and methodologies in the Descriptive Statistics course. The data does not contain any sensitive information and can be used for practical learning activities.
DOI: 10.6084/m9.figshare.28358399.v1
title: Supplementary Material for: Single intraluminal delivery of a nitric oxide-donor results in inhibition of intimal thickening in the rabbit femoral artery

description: Vascular smooth muscle cell proliferation and vascular homeostasis is thought to be regulated by nitric oxide and prostaglandins. 
We examined the effect of exogenous linsidomine, a NO releasing compound, in a model of balloon injury iliac arteries of rabbits. On the cellular levels NO can exert effects like cellular survival, growth and proliferation inhibition. 
Smooth muscle cell (SMC) proliferation was quantified as change of intima-media-ratio. Linsidomine injection or its vehicle was performed with an infusion-balloon catheter directly into the vessel wall. Balloon angioplasty resulted in a significant increase of intima-media-ratio during three weeks. Linsidomine treatment decreased the intima media ratio significantly (0.65±0.05 vs 1,2±0.2 intima-media-ratio, p&lt;0.05). However, control vessels had an intima media ratio of 0.15±0.02. This effect was similar to NOS-2 transfected vessels following angioplasty. In in vitro experiments linsidomine inhibited significantly and dose-dependently rabbit smooth muscle cell proliferation measured by BrdU incorporation. Further linsidomine increased rate of apoptotic SMC’s, however this effect was p53 independent. 
Simultaneous angioplasty of the rabbit iliac artery and direct injection of linsidomine into the vessel wall seem to be an effective strategy to reduce neointima formation. Despite single administration, local application of linsidomine resulted in potent inhibition of intima proliferation.
DOI: 10.6084/m9.figshare.7339511.v1
title: Retinal Image Synthesis and Semi-supervised Learning for Glaucoma Assessment

description: Original images and synthetic images generated by the DCGAN and SS-DCGAN models. Image labels for synthetic data are also included. <br>DOI: 10.1109/TMI.2019.2903434<br>
DOI: 10.17632/9gwr9bft4k
title: DataSet: Spatial and temporal heterogeneity of soil respiration in a bare-soil Mediterranean olive grove Time Series of Li8100 Soil respiration, SWC and Tsoil in Es-Cnd

description: DataSet of 30 min time series of Soil Respiration, SWC and Tsoil in ES-Cnd Experimental site (olive grove) and code for graphs and analysis.
DOI: 10.6084/m9.figshare.3529214.v1
title: Appendix C. Effect of root exudate fractions from Alliaria petiolata on the viability of AM fungi in soils from six sites in Europe and six sites in North America.

description: Effect of root exudate fractions from Alliaria petiolata on the viability of AM fungi in soils from six sites in Europe and six sites in North America.
DOI: 10.17632/9nb3vbbtjw
title: Experimental Data for servo-hydraulic system

description: Measurement data for different parts of the system are available here Data set for validity check "system_input" is the real system input, and "Piston_pos" gives the output of the system (Piston position).
DOI: 10.26188/26878414.v1
title: Mann et al. Plant Exudates Mid-IR and Far-IR Data and Analysis

description: Spectral data in both mid-IR and far-IR regions for analysis of Australian plant exudates.
DOI: 10.17632/3d68689vvc
title: Circularity in the fast fashion industry

description: Text fragments and associated codes from the content analysis on the topic of circularity in the fast fashion industry. Includes the Nvivo file on which the analysis was performed.
DOI: 10.6084/m9.figshare.19499300.v1
title: patches and local annotations, slide 140, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.21963280.v1
title: Biomarkers of 4-hydroxy-<i>N,N</i>-methylpropyltryptamine (4-OH-MPT) intake identified from human hepatocyte incubations

description: 4-Hydroxy-<i>N,N</i>-methylpropyltryptamine (4-OH-MPT) is a psychedelic tryptamine whose use is regulated in several countries. Due to unspecific effects, consumption can be ascertained only through toxicological analyses. However, the trace amounts of tryptamines are usually challenging to detect in biological samples. 4-OH-MPT metabolism was characterized to identify optimal metabolite markers of intake in clinical/forensic toxicology. 4-OH-MPT was incubated with 10-donor-pooled human hepatocytes to simulate <i>in vivo</i> conditions; samples were analyzed by liquid chromatography-high-resolution tandem mass spectrometry (LC-HRMS/MS), and data were processed with Compound Discoverer from Thermo Scientific. LC-HRMS/MS and data mining were supported by <i>in silico</i> metabolite predictions (GLORYx). Three phase I and four phase II metabolites were identified, including <i>N</i>-oxidation and <i>N</i>-demethylation at the alkylamine chain, and <i>O</i>-glucuronidation and sulfation at the hydroxylindole core. 4-OH-MPT metabolic fate was consistent with the human metabolism of tryptamine analogues: we suggest 4-OH-MPT-<i>N</i>-oxide and 4-hydroxy-<i>N,N</i>-propyltryptamine (4-OH-PT) as metabolite biomarkers of 4-OH-MPT consumption after glucuronide/sulfate hydrolysis in biological samples to improve detection of 4-OH-MPT and phase I metabolites; 4-OH-MPT-glucuronide is suggested as an additional biomarker when hydrolysis is not performed. Further research on the metabolism of structural analogues is necessary to evaluate the specificity of 4-OH-MPT metabolite biomarkers.
DOI: 10.6084/m9.figshare.26413243.v1
title: GAD7_Dataset.sav

description: The data set shows the results of the GAD-7 questionnaire, which were collected as part of the routine psychosocial screening of oncology patients at the start of chemotherapy.
DOI: 10.17632/zyfjmvxh5z
title: SSE Constituent Data and SSE Index Data

description: "codelist" contains the codes of the 56 constituent stocks of Shanghai Composite Index (SSE)."1minstockprice_2015_2020" contains the 1-minute prices data of these constituent stocks. "1minsh000001price_2008_2020" contains the 1_minute prices data of SSE from 2008 to 2020.
DOI: 10.17632/ts4vc55rzp
title: Human Y chromosome haplogroup L1-M22 traces Neolithic expansion in West Asia and supports the Elamite and Dravidian connection. Pathak et al.

description: The research hypothesis of our study revolves around investigating the genetic history and population movements associated with the Y chromosome haplogroup L1-M22, which is prevalent in West and South Asian populations but lacks comprehensive study. Our data, consisting of Y chromosome reads (FASTQ and BAM files), was subjected to robust Bayesian analyses involving 165 high-coverage Y chromosomes. The analyses support a West Asian origin for haplogroup L1-M22 approximately 20.6 thousand years ago (kya). Haplogroup L1-M22 exhibits a genetic ancestry paralleling that of hunter-gatherers from the Iranian Plateau and the Caucasus, providing insights into the genetic makeup of ancient populations in the region. We identified two distinct population groups carrying L1-M22 during the Early Holocene. One group expanded alongside the West Asian Neolithic transition, while the other migrated to South Asia around 8-6 kya, potentially contributing to the spread of Dravidian languages. Notably, the South Asian L1-M22 lineages experienced expansion around 4-3 kya, coinciding with the introduction of Steppe ancestry in the region. Our findings suggest a potential association between the migration of South Asian L1-M22 lineages and the spread of Dravidian languages, highlighting the intersection of genetic and linguistic dynamics in shaping population histories. The interpretation of our data underscores the significance of haplogroup L1-M22 in elucidating the historical dynamics of West and South Asian populations. These insights have implications for studies of human evolutionary and population genomics, shedding light on the intricate tapestry of human history.
This dataset includes all supplemental files of the original publication.
DOI: 10.17632/vh4tdsscns
title: Data for: Do emergency ventilators deliver preset tidal volumes? - Mechanical ventilation in a human cadaver model of asynchronous cardiopulmonary resuscitation.

description: We conducted a crossover study of different ventilators in a human cadaver model of asynchronous cardiopulmonary resuscitation, to investigate wether transport respirators are able to provide ventilation during ongoing chest compressions [research paper - coming soon]. We found ventilations to be highly fragmented by chest compressions with meaningful reduction of deliverd tidal volumes. We also found significant differences of tidal volume reduction between the evaluated ventilators. The repository contains raw data recordings of flow, airway pressure, esophageal pressure, depth of the automated chest compression piston, and force of the automated chest compression piston. The dataset of derived values and especially volumes analysed is included in this repository. Data of this repository is described in detail in a co-submitted data publication [data publication - coming soon]. This data enables readers to review tracings of all respiratory measurements on raw data level. In another repository we provide a plotting tool to do so [3]. The data may be used to examine interactions of chest compressions and ventilations during cardiopulmonary resuscitation in depth.
DOI: 10.6084/m9.figshare.14870205.v1
title: Excel File.xlsx

description: <b>Purpose:</b> The purpose of this research is to study on the digital taxation for creating frugal innovation for institute of higher learning (IHL) educational ecosystem. In Malaysia, government had exempted online distance learning to fall within the definition of digital service, in order to encourage online distance learning, and it will be exempted from service tax. These changes have greatly impacted the tertiary education to deliver education service with lower costs. Thus, in this study, the theory of digital taxation will be discussed in contribution to frugal innovation in IHL. <b>Methodology</b>: The methodology for this paper is research gap analysis using major databases, keywords and categories of research in this field. Data was analysed to answer research question on the trend in digital taxation and how frugal innovation can play an important role. Data was analysed and presented. <b>Findings</b> –Through the model of digital taxation for IHL to achieve frugal innovation, the result of this study will bring a significant impact on the financial control towards IHL. The theory of digital taxation, and also the tax policies, on the influence on IHL will be discussed in this study.A framework of analysis will also be developed that allow to highlight the main tax theory on contribution to frugal innovation in IHL. The research will come to light with ideas and ways to build frugal innovation in IHL educational ecosystem. <b>Research limitations</b><b> </b>– This study presents research gap analysis in the field to unearth the need for more research. However it is limited to IHL and digital taxation only between last 2 decades.
DOI: 10.6084/m9.figshare.25118831.v1
title: Genome assembly and annotation for Lagerstroemia speciosa

description: Genome assembly and annotation for Lagerstroemia speciosa
DOI: 10.6084/m9.figshare.28779380.v1
title: hjhjhjhhjjjjuu

description: jisjjsjjjjjssss
DOI: 10.6084/m9.figshare.28162211.v1
title: Supplementary Material for: Clinical values of serum platelet-activating factor in hypertensive disorders complicating pregnancy

description: Introduction: Serum platelet-activating factor (PAF) was proven to be associated with gestational hypertension. However, the predictive value of serum PAF at early pregnancy for the occurrence and outcomes of hypertensive disorders complicating pregnancy (HDCP) remained unclear.
Methods: The demographic and clinical characteristics of patients were compared among the different subgroups. The serum PAF level was determined using an enzyme-linked immunosorbent assay. The predictive value of serum PAF for the occurrence and outcomes of HDCP was evaluated using receiver operating characteristic curve analysis. The correlation of serum PAF with blood pressure was assessed using Spearman analysis.
Results: Both systolic blood pressure and diastolic blood pressure were significantly higher in HDCP patients, as well as the serum levels of TNF-α and IL-1β at diagnosis/enrollment, while serum levels of IL-10 showed the opposite trend. Serum PAF levels were significantly higher in patients with HDCP compared to normal pregnant women. Furthermore, serum PAF levels were higher in HDCP patients with mild preeclampsia compared to those with gestational hypertension and even more elevated in HDCP patients with severe preeclampsia at the early pregnancy stage and at diagnosis. In HDCP patients, increased serum PAF levels at early pregnancy and at diagnosis were associated with poor outcomes. Additionally, serum PAF levels could predict the occurrence of HDCP and poor outcomes.
Conclusion: Serum PAF from HDCP patients at both the early pregnancy and diagnosis stages could effectively predict the occurrence and outcome of HDCP.
DOI: 10.17632/344n6ts3tg
title: FORMIT-M simulator

description: This dataset contains the R code and inputs in csv format to run the FORMIT-M model. Inputs concerning initial forest cover are only given for Finland, and a corresponding output file for Finland is given. The input data are synthetic because National Forest Inventory data (NFI) the model was created with are not public. The model can be run for any site given similar real input data, weather from NFI or elsewhere.
DOI: 10.17632/g777jv6nzd
title: Data for: An improved Tilt-Euler deconvolution and its application on a Fe-polymetallic deposit

description: Please see the detailed information in the attached Readme file.
DOI: 10.17632/t5nb6g859m
title: Happiness among Elderly Malaysia

description: Emotional And Instrumental Social Support As Determinants Of Happiness : A Cross-Sectional Study Of Malaysian Elderly
DOI: 10.17632/xw5sch7p5b
title: OxDEM Benchmark Dataset: Animated Results of Discrete Element Method Simulations

description: This Mendeley Data repository contains animated results of benchmark simulations used to validate OxDEM, a novel strain energy-based formulation of the Discrete Element Method. These animations visually demonstrate the model's behavior in scenarios including single-particle bouncing, multi-particle freefall, and granular packing. The dataset provides valuable supplementary material for the associated research article, enabling researchers to independently assess the accuracy and robustness of the OxDEM implementation.
DOI: 10.17632/h66k5s7wn9
title: Data for: A facile Zn involved self-sacrificing template-assisted strategy towards porous carbon frameworks for aqueous supercapacitors with high diffusion efficiency
DOI: 10.17632/kmvj667crv
title: ELDERLY HEALTH IN INDIA: A DISCUSSION

description: The elderly population (ageing 60 above) in India is increasing and is projected to climb by 11% point between 2010 to 2050 (UNPD, 2011). Due to better living condition and improved well-being, better health care system, availability of medicines, awareness among the people the mortality rate has reduced substantially. This demography brings a new economic and social concerns afront. The present work tries to investigate the health perception, nature and status of ailment and treatment availed by this part of population in India along with their demographic profile. The database used in the study is the 71st round dataset of National Sample Survey Organisation (NSSO). The work gives a brief review of the recent policies and initiatives taken to end the health challenges faced by the ageing population. Probable policy recommendations have been made that can potentially address the health concerns of the elderly in the country.
DOI: 10.17632/br6ykjxmh8
title: Simulated results by NEOWAVE-STM

description: This data set provides the final calculation results corresponding to the figure number.