cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10501330
title: Die Stubengesellen der Gesellschaft zum Narren und Distelzwang in Bern 1485-1535

description: Die hier hinterlegten Tabellen dokumentieren alle Mitglieder der Gesellschaft zum Narren und Distelzwang in Bern zwischen 1485 und 1535, basierend auf den sogenannten Stubenrodeln der Gesellschaft in der Burgerbibliothek Bern (BBB ZA Distelzwang 138: Stubenrodel, Bd. 1 (1454–1485); BBB ZA Distelzwang 139: Stubenrodel, Bd. 2 (1486–1544)).

Die Zusammenstellung erfolgte grösstenteils im Rahmen einer 2018 an der Abteilung für Mittelalterliche Geschichte der Universität Bern eingereichten Masterarbeit ("Zwischen Geschlechtertrinkstube und Rathaus. Eine prosopographische Untersuchung der Mitglieder der Geschlechtergesellschaft 'zum Narren und Distelzwang' als Teil der politischen Führungsgruppe Berns zwischen 1485 und 1535"). Nebst allgemeinen genealogischen und biografischen Angaben zu den einzelnen Gesellschaftsmitgliedern wurde dabei insbesondere deren Tätigkeit in den wichtigsten städtischen Ämtern gemäss den in den Berner "Osterbüchern" überlieferten Ämterlisten aufgearbeitet (Staatsarchiv des Kantons Bern, StABE A I 647: Osterbuch Nr. 1 (1485–1506); StABE A I 648: Osterbuch Nr. 2 (1507–1526); StABE A I 649: Osterbuch Nr. 3 (1527–1551)). 2023 wurde die ursprüngliche Zusammenstellung für die Publikation eines Artikels zum Thema korrigiert und um zwei ergänzende Personenkataloge zu geistlichen und hochadligen Gesellschaftsmitgliedern erweitert.

Erklärende Hinweise zu den erfassten Informationen sowie spezifische Quellenangaben finden sich jeweils auf dem ersten Tabellenblatt jeder Datei.
DOI: 10.5281/zenodo.10614906
title: Rainfall and Temperature data
DOI: 10.5281/zenodo.10614907
title: Rainfall and Temperature data
DOI: 10.34740/kaggle/dsv/7551345
title: Global Genomic Neurofibromatosis Neoplasia
DOI: 10.5281/zenodo.10615183
title: The Mitigating Effect of Vinpocetine in Experimental Pulmonary Fibrosis ‎
DOI: 10.5281/zenodo.10615184
title: The Mitigating Effect of Vinpocetine in Experimental Pulmonary Fibrosis ‎
DOI: 10.5281/zenodo.10615191
title: Performance Data and Learner Preferences of Beginners in a 1-hour Spanish Course with Imitated Instructional Methods (Study 1) and without (Study 2)

description: This dataset includes performance data and preferences of learners who participated in an online Spanish course to learn Spanish as a foreign language,



with imitated instructional methods (Study 1, N=103, median completition time 00:47:31), and

without imitated instructional methods (Study 2, N=54, median completition time 00:42:29).


Learners were recruited via Prolific.

Columns are named by the task number (0-18). H5P tasks begin with "hvp".

The following preferences are recorded on Likert Scale, and for each preference, two items are recorded:



Power Distance (PD)

Group Work (GW)

Competition (CP)

Gamification (GA)

Thoroughness (TH)


Additionally, the course structure is provided (course-structure.pdf).
DOI: 10.5281/zenodo.10615192
title: Performance Data and Learner Preferences of Beginners in a 1-hour Spanish Course with Imitated Instructional Methods (Study 1) and without (Study 2)

description: This dataset includes performance data and preferences of learners who participated in an online Spanish course to learn Spanish as a foreign language,



with imitated instructional methods (Study 1, N=103, median completition time 00:47:31), and

without imitated instructional methods (Study 2, N=54, median completition time 00:42:29).


Learners were recruited via Prolific.

Columns are named by the task number (0-18). H5P tasks begin with "hvp".

The following preferences are recorded on Likert Scale, and for each preference, two items are recorded:



Power Distance (PD)

Group Work (GW)

Competition (CP)

Gamification (GA)

Thoroughness (TH)


Additionally, the course structure is provided (course-structure.pdf).
DOI: 10.17909/3es1-hp33
title: TESS pdcsap data
DOI: 10.5281/zenodo.10615142
title: Supplementary Data for Chapter "Utilizing Golden Gate Assembly to Streamline CRISPR-Cas/NgTET-Based Phage Mutagenesis"

description: This repository complements the book chapter “Utilizing Golden Gate Assembly to Streamline CRISPR-Cas/NgTET-Based Phage Mutagenesis” by Nadiia Pozhydaieva and Katharina Höfer in “Methods in Molecular Biology” (in publishing). It contains the plasmids used for Golden Gate cloning as outlined in the approach. Golden Gate assembly is used to facilitate the exchange of donor DNA sequences (DNA sequences, that are introduced to phage genome upon mutagenesis), to streamline the mutagenesis process and rapidly customize it for various targets. Within this system, the donor DNA is integrated downstream of the gene for NgTET dioxygenase. The latter is crucial for the efficient engineering of phages with extensive cytosine DNA modifications.
DOI: 10.5281/zenodo.10615143
title: Supplementary Data for Chapter "Utilizing Golden Gate Assembly to Streamline CRISPR-Cas/NgTET-Based Phage Mutagenesis"

description: This repository complements the book chapter “Utilizing Golden Gate Assembly to Streamline CRISPR-Cas/NgTET-Based Phage Mutagenesis” by Nadiia Pozhydaieva and Katharina Höfer in “Methods in Molecular Biology” (in publishing). It contains the plasmids used for Golden Gate cloning as outlined in the approach. Golden Gate assembly is used to facilitate the exchange of donor DNA sequences (DNA sequences, that are introduced to phage genome upon mutagenesis), to streamline the mutagenesis process and rapidly customize it for various targets. Within this system, the donor DNA is integrated downstream of the gene for NgTET dioxygenase. The latter is crucial for the efficient engineering of phages with extensive cytosine DNA modifications.
DOI: 10.34740/kaggle/dsv/7551714
title: 2021 World Population (updated daily)
DOI: 10.34740/kaggle/dsv/7551732
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.5281/zenodo.10606158
title: Structure of engineered encapsulin P3P4

description: Encapsulins are protein nanocages with icosahedral symmetry. We present a cryo-electron microscopy (cryoEM) dataset comprising 50 motion-corrected micrographs (and 3082 particles) of the engineered encapsulin P3P4 from Quasibacillus thermotolerans. This dataset allows for the reconstruction of cryoEM density at a resolution of 3.1 Å. Given the limited number of micrographs, the dataset is well-suited for benchmarking of various cryoEM tools.

 

Dataset:




kV
200


Cs
2.7


Total exposure dose
24.37


Pixel size
1.2


Box size
540


Number of micrographs
50


Number of particles
3082
DOI: 10.5281/zenodo.10606159
title: Structure of engineered encapsulin P3P4

description: Encapsulins are protein nanocages with icosahedral symmetry. We present a cryo-electron microscopy (cryoEM) dataset comprising 50 motion-corrected micrographs (and 3082 particles) of the engineered encapsulin P3P4 from Quasibacillus thermotolerans. This dataset allows for the reconstruction of cryoEM density at a resolution of 3.1 Å. Given the limited number of micrographs, the dataset is well-suited for benchmarking of various cryoEM tools.

 

Dataset:




kV
200


Cs
2.7


Total exposure dose
24.37


Pixel size
1.2


Box size
540


Number of micrographs
50


Number of particles
3082
DOI: 10.5281/zenodo.10615330
title: melanotaenia_trifasciata_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.10615331
title: melanotaenia_trifasciata_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.10614649
title: Measurement report: Rapid oxidation of phenolic compounds by O3 and HO•: effects of air-water interface and mineral dust in tropospheric chemical processes
DOI: 10.5281/zenodo.10614650
title: Measurement report: Rapid oxidation of phenolic compounds by O3 and HO•: effects of air-water interface and mineral dust in tropospheric chemical processes
DOI: 10.25345/c58g8fv1x
title: MassIVE MSV000094000 - Schoenoplectus californicus (C.A. Mey.)
title: Paper title: Schoenoplectus californicus (C.A. Mey.) Sojak: Chemical profile, antioxidant capacity, psychopharmacological and analgesic activity. Author List: Julio Campos-Florian, Gladys Galliani-Huamanchumo, Jose Condor-Goytizolo, Lucia Flores-Atoche, Lucia Gonzales-Mendez, Marilu Roxana Soto-Vasquez, Ines Castro-Dionicio, Juan Carlos Rodriguez Soto, Paul Alan Arkin Alvarado-Garcia. Data submitted: mzML Files (3 injection replicates) used to generate Ion Identity Molecular Network.
DOI: 10.3886/e197521
title: Investigation of Health Services for TB by External Private Providers (INSTEP) - Standardized Patient Study

description: Privately practicing physicians
have been associated with a lower quality of tuberculosis care. This study
aimed to evaluate the correctness of private practitioners’ clinical decisions
by using standardized tuberculosis cases posing as mystery patients. We developed four standardized
tuberculosis cases, namely: (A) patient with classical tuberculosis-associated
complaints, (B) case (A) presenting a negative microscopy result, (C) case (A)
presenting a positive microscopy result, and (D) case (A) with a recent history
of defaulting from a tuberculosis treatment. Professional actors presented
these cases to randomly selected physicians and community health centers/puskesmas (cases A and D only) in
Bandung, Indonesia, and recorded their interactions on a standardized self-report checklist.
For each case, correct decision was defined as: (1) a referral for sputum
examination, (2) a referral for a chest x-ray and/or prescription of non-anti
tuberculosis drugs antibiotics, (3) prescription of anti-tuberculosis drugs,
and (4) a referral for rapid molecular examination, respectively.
DOI: 10.3886/e197521v1
title: Investigation of Health Services for TB by External Private Providers (INSTEP) - Standardized Patient Study

description: Privately practicing physicians
have been associated with a lower quality of tuberculosis care. This study
aimed to evaluate the correctness of private practitioners’ clinical decisions
by using standardized tuberculosis cases posing as mystery patients. We developed four standardized
tuberculosis cases, namely: (A) patient with classical tuberculosis-associated
complaints, (B) case (A) presenting a negative microscopy result, (C) case (A)
presenting a positive microscopy result, and (D) case (A) with a recent history
of defaulting from a tuberculosis treatment. Professional actors presented
these cases to randomly selected physicians and community health centers/puskesmas (cases A and D only) in
Bandung, Indonesia, and recorded their interactions on a standardized self-report checklist.
For each case, correct decision was defined as: (1) a referral for sputum
examination, (2) a referral for a chest x-ray and/or prescription of non-anti
tuberculosis drugs antibiotics, (3) prescription of anti-tuberculosis drugs,
and (4) a referral for rapid molecular examination, respectively.
DOI: 10.5281/zenodo.10615368
title: melanotaenia_nigrans_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.10615369
title: melanotaenia_nigrans_spades_01.fasta.gz

description: .
DOI: 10.6084/m9.figshare.25140692
title: Dataset for Systematic Review of Internet Memes.docx

description: This dataset presents 24 studies on Internet memes published between 2015-2023 on the Taylor and Francis Online database.
DOI: 10.34740/kaggle/dsv/7552154
title: COVID Vaccination in World (updated daily)
DOI: 10.5281/zenodo.10615383
title: Raw data for "Unsteady secondary flow structure at a large river confluence"
DOI: 10.6084/m9.figshare.25133564
title: inDecay Training data : processed dataframe + indelgen

description: The training data for reimplementing inDecay and FORECasT.The fasta file records the guide RNA, strand, cut-site, and target sequence matched by OligoID.The indelgen folder contains the indelgen file for each OligoID. Each indelgen file records all possible indel events estimated based on the target sequences.Finally, there are five processed dataframe (really big csv). This dataframe contains all the observed events and event frequency.
DOI: 10.6084/m9.figshare.25133564.v1
title: inDecay Training data : processed dataframe + indelgen

description: The training data for reimplementing inDecay and FORECasT.The fasta file records the guide RNA, strand, cut-site, and target sequence matched by OligoID.The indelgen folder contains the indelgen file for each OligoID. Each indelgen file records all possible indel events estimated based on the target sequences.Finally, there are five processed dataframe (really big csv). This dataframe contains all the observed events and event frequency.
DOI: 10.25835/td4w2pg9
title: Supplementary_Wellpott_et_al

description: Supplementary data to Wellpott et al. manuscript:

Tab. S1 mean values and standard deviation of shoot length and SPAD values. n=6-48
Tab. S2 Selected primers for gene expression analysis.
Tab. S3 Daily mean temperature in °C. Start of experiment 1 (day 0): June 23th. Start of experiment 2 (day 0): July 20th. Evaluation dates are marked in green.
Tab. S4 Shoot growth, root growth, and root-shoot-ratio of both experiments with standard deviation (SD), n=6-8. D0: Start of the experiment, D7: seven days after drought stress (S) or normal watering (C), D14: 14 days after stress or normal water supply, Rec 1: nine days of rewatering after seven days of stress, Rec 2: nine days of rewatering after 14 days of stress
Tab. S5 Fold changes of normalized gene expression (stress/control). 
Tab. S6 Significant differences in gene expression at the start of the experiments 1 and 2 (d0). n=4. Statistics: Two factorial linear model, Significance codes: *** = p &lt; 0.001; ** = p &lt; 0.01; * = p &lt; 0.05. ). Glyx: Lactoylglutathione lyase / glyoxalase I, ZBD: Zinc-binding dehydrogenase family protein, RPT5a: regulatory particle triple-A ATPase 5A, 13-LOX: lipoxygenase, SHMT: serine transhydroxymethyltransferase, POD: Protein peroxidase 51-like, SBT1.7: Subtilase family protein, INH1: cell wall / vacuolar inhibitor of fructosidase.
Tab. S7 Global and diffuse radiation at the experimental site (Herrenhausen, Hannover, Germany).
Figure S1 Mean Temperature from 14 days before start of experiments (-14) to second evaluation date 14 days after drought stress (14) with standard deviation (SD), n=2 or 3. Values for mean temperature for day and night can be looked up in Table S2.
DOI: 10.5517/ccdc.csd.cc2j3wk3
title: CCDC 2327435: Experimental Crystal Structure Determination

description: Related Article: N. Rharmili, O. Abdellaoui, F. Ouazzani Chahdi, J.T. Mague, T. Hökelek, A. Mazzah, Y. Kandri Rodi, N.K. Sebbar|2024|Acta Crystallogr.,Sect.E:Cryst.Commun.|80|232|doi:10.1107/S2056989024000756
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j3wl4
title: CCDC 2327436: Experimental Crystal Structure Determination

description: Related Article: Y. Ait Elmachkouri, E. Irrou, H. El Monfalouti, A. Mazzah, T. Hökelek, J.T. Mague, M.L. Taha, N.K. Sebbar|2024|Acta Crystallogr.,Sect.E:Cryst.Commun.|80|240|doi:10.1107/S2056989024000744
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j43c5
title: CCDC 2327646: Experimental Crystal Structure Determination

description: Related Article: F.N. Naghiyev, V.N. Khrustalev, M. Akkurt, E.A. Dukhnovsky, A. Bhattarai, A.N. Khalilov, İ.G. Mamedov|2024|Acta Crystallogr.,Sect.E:Cryst.Commun.|80|223|doi:10.1107/S2056989024000835
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j4bpq
title: CCDC 2327873: Experimental Crystal Structure Determination

description: Related Article: B. Yotnoi, A. Rujiwatra|2024|Acta Crystallogr.,Sect.E:Cryst.Commun.|80|228|doi:10.1107/S2056989024000872
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10463493
title: Phylogenetic Augmentation Data

description: This entry contains input files used for the analysis from the paper "Improving the performance of supervised deep learning for regulatory genomics using phylogenetic augmentation" by Andrew G Duncan, Jennifer A Mitchell, and Alan M Moses. The code to run the analysis can be found at "https://github.com/agduncan94/phylogenetic_augmentation_paper"
DOI: 10.5281/zenodo.8356746
title: Phylogenetic Augmentation Data

description: This entry contains input files used for the analysis from the paper "Improving the performance of supervised deep learning for regulatory genomics using phylogenetic augmentation" by Andrew G Duncan, Jennifer A Mitchell, and Alan M Moses. The code to run the analysis can be found at "https://github.com/agduncan94/phylogenetic_augmentation_paper"
DOI: 10.5281/zenodo.8356747
title: Phylogenetic Augmentation Data

description: This entry contains input files used for the analysis from the paper "Improving the performance of supervised deep learning for regulatory genomics using phylogenetic augmentation" by Andrew G Duncan, Jennifer A Mitchell, and Alan M Moses. The code to run the analysis can be found at "https://github.com/agduncan94/phylogenetic_augmentation_paper"
DOI: 10.6073/pasta/4185c232bb586d4b6fca8763a1943c0d
title: Hubbard Brook Experimental Forest: 15-minute Precipitation Measurements, 2011 - present

description: Beginning in 2011, ten electronic weighing rain gauges were progressively implemented at the Hubbard Brook Experimental Forest to measure precipitation at 15-minute intervals. These data were gathered at the Hubbard Brook Experimental Forest in Woodstock, NH, which is operated and maintained by the USDA Forest Service, Northern Research Station.
DOI: 10.5281/zenodo.10519645
title: Numerical simlations of the volcanic eruption of Hunga Tonga in January 2022

description: This archive contains the simulation settings and results of the Hunga-Tonga 2022 volcanic eruption.
DOI: 10.5281/zenodo.10519646
title: Numerical simlations of the volcanic eruption of Hunga Tonga in January 2022

description: This archive contains the simulation settings and results of the Hunga-Tonga 2022 volcanic eruption.
DOI: 10.34740/kaggle/dsv/7416825
title: BBC News
DOI: 10.5281/zenodo.10520789
title: CUT&RUN_2CD_adultLMPP+2m_H3K4me3.CPM.bigwig

description: CUT&RUN_2CD_adultLMPP+2m_H3K4me3.CPM.bigwig
DOI: 10.5281/zenodo.10520790
title: CUT&RUN_2CD_adultLMPP+2m_H3K4me3.CPM.bigwig

description: CUT&RUN_2CD_adultLMPP+2m_H3K4me3.CPM.bigwig
DOI: 10.26179/5aqt-jp34
title: The distribution and composition of mesopelagic fish assemblages in the Southern Ocean and their relation to major water masses
DOI: 10.34740/kaggle/dsv/7416915
title: Billboard charts
DOI: 10.6084/m9.figshare.25003727
title: code

description: <b>code for review</b>2D FPF in Example 1
DOI: 10.6084/m9.figshare.25003253
title: Reassociation with a specialist insect reshapes an invader leaf fungal community

description: we use a series of invasive populations of the plant <i>Ambrosia artemisiifolia</i> that vary in reassociation timespan with their native specialist herbivore, the beetle <i>Ophraella communa</i>, to test whether renewed selection imposed by the herbivore is accompanied by evolutionary shifts in leaf chemistry and correlated changes in phyllosphere microbial communities. In common garden experiments we found directional changes in phyllosphere fungal communities with increasing duration of reassociation.
DOI: 10.6084/m9.figshare.25003253.v1
title: DATA.xlsx

description: we use a series of invasive populations of the plant <i>Ambrosia artemisiifolia</i> that vary in reassociation timespan with their native specialist herbivore, the beetle <i>Ophraella communa</i>, to test whether renewed selection imposed by the herbivore is accompanied by evolutionary shifts in leaf chemistry and correlated changes in phyllosphere microbial communities. In common garden experiments we found directional changes in phyllosphere fungal communities with increasing duration of reassociation.
DOI: 10.13011/m3-0mxz-xd55
title: Simulating Hindered Grain Boundary Diffusion Using the Smoothed Boundary Method
DOI: 10.5883/bold:abw9564
title: Overview of Barcode Index Number - BOLD:ABW9564

description: DNA barcode data hosted in the Data Portal of the Barcode of Life Data Systems. Records consist of specimen metadata, specimen images, and sequence data.
DOI: 10.17608/k6.auckland.24970713
title: HVN Kiwi, Fruity and Friendly 1 Metadata Record - Effect of a preload on postprandial glycaemic response and satiety

description: This metadata record and it's attached files make statements about the kinds of data collected as part of this research, and set out policies for governance of that data, now and in the future.<b>Description: </b>It is important to control the glycaemic and hormonal response to food both for people with normal and impaired glucose tolerance. The purpose of this project was to investigate whether glycaemic and hormonal responses to carbohydrate-containing food can be manipulated by providing meals in two stages (a preload given half an hour before the main meal) compared with meals containing the same amount of carbohydrate given in a single sitting. Our hypothesis was that a beneficial effect of lowering the glycaemic response without adversely affecting the insulin or satiety hormone responses would be observed when a preload containing carbohydrate was given before either breakfast or lunch.Healthy New Zealand Chinese participants consumed kiwifruit as part of a carbohydrate meal, in which the kiwifruit carbohydrate partially substituted the primary meal carbohydrate. Total carbohydrate in the meal was held constant yet the kiwifruit was able to significantly reduce the blood glucose response. And if the kiwifruit was consumed about 30 min before the main carbohydrate intake, there was a dramatic reduction in the post-meal blood glucose spike.