cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/fpmmftpsy2.1
title: Data from: Duets convey information about pair and individual identities in a Neotropical bird

description: Data and R codes for reproducing the statistical analyses from the article:
Diniz P, Silva-Jr EF, Rech GS, Ribeiro PHL, Guaraldo AC, Macedo RH, Amorim PS (2024). Duets convey information about pair and individual identities in a Neotropical bird, Current Zoology, zoae064, https://doi.org/10.1093/cz/zoae064

Data Description:
The dataset includes RDS files (to be loaded in R) and one XLSX file. These contain information on acoustic measurements, specifically spectro-temporal and temporal structure characteristics of different components of rufous hornero (Furnarius rufus) duets: complete duets, overlapping duet sections, duet phrases, overlapping syllable parts, and non-overlapping syllable parts. Detailed information on the recording locations and settings is available in the referenced article.

Data Files:
pair_measures_list.RDS: Contains duet measurements at the pair level, divided into five vectors:
Spectro-temporal measurements of complete duets
Spectro-temporal measurements of overlapping duet sections
Temporal structure measurements of complete duets
Temporal structure measurements of overlapping duet sections
Spectro-temporal measurements of overlapping syllable parts

indiv_measures_list.RDS: Contains duet measurements at the individual level, divided into two vectors:
Temporal structure measurements of duet phrases
Spectro-temporal measurements of non-overlapping syllable parts

results.xlsx: Summarizes the statistical results in the following sheets:
Sheets 1–3: Results of permuted Discriminant Function Analyses (pDFAs)
Sheet 4: Results of Potential for Identity Coding (PIC)
Sheet 5: Results of Permutational Multivariate Analysis of Variance (PERMANOVA)
Sheet 6: Legends explaining the columns and variables in the previous sheets

R Code Description:
The provided R scripts cover the following statistical analyses and figure generation:
Script 1. pDFA, DFA, and PIC for population (site) classification
Script 2. pDFA, DFA, and PIC for pair classification
Script 3. pDFA, DFA, and PIC for sex classification
Script 4. pDFA, DFA, and PIC for individual classification
Script 5. Figure generation for pDFA results (Figure 2)
Script 6. Figure generation for PIC results (Figures 4 and S1)
Script 7. PERMANOVA for pair-level duet traits
Script 8. PERMANOVA for individual-level duet traits
Script 9. PERMANOVA for individual-level duet traits, analyzed within each sex
Script 10. Figure generation for PERMANOVA results (Figure 3)
DOI: 10.17632/2s44zm5433.1
title: Urban growth and spatial segregation increase disaster risk: Lessons learned from the 2023 disaster on the North Coast of São Paulo, Brazil

description: Data repository for associated publication of same title.
Information on the description of the datasets and the main code is presented in the README file.
DOI: 10.17632/h42rnt5bpr.1
title: Nutrients and drought alter tri-trophic interactions in cool-temperate forests

description: Herbivorous insects are the main consumers in forest ecosystems, and the complexity of trophic interactions varies with resource availability, heterogeneity among feeding guilds, and the presence of natural enemies. In this study, we evaluated the impact of nutrient supplementation and a drought event on insect herbivory in cool-temperate Nothofagus pumilio forests located in southern South America. We examine how these factors affect herbivory by various feeding guilds and the rate of parasitism in leaf miners. Previous research in this ecosystem has demonstrated that habitat type (dry versus wet) and soil nutrient levels play a role in the regulation of insect folivory by insectivorous birds. However, there is limited understanding of the influence of nutrients and drought, as well as their potential interaction with insect folivory and parasitism in controlling leaf damage in temperate Patagonian forests. This focus is relevant when considering that Patagonian forests, along with other forest ecosystems around the world, are being affected by episodes of extreme climatic variability, as well as the advancement of anthropic activities (e.g., livestock) which modify soil nutrient dynamic. Collectively, these factors may modify tri-trophic interactions in forest ecosystems. Specifically, we asked the following questions: (i) what is the effect of nitrogen addition and a drought event on the leaf quality, damaged leaf area, and frequency of damage to N. pumilio saplings caused by different insect guilds? (ii) What is the effect of nitrogen addition and a drought event on parasitism rates of different morphotypes of leaf miners? 
Our results showed that nitrogen addition increased the foliar nitrogen content but had no effect on total damage by arboreal insects. However, the different feeding guilds responded differently to nitrogen addition and these responses varied between average or dry year and within the growing season. Particularly, miner activity responded positively to nitrogen addition, increasing their incidence towards the late of the average year. The positive effect of N addition on miner activity did not cascade up to the trophic level of parasitoids, which varied with the climatic context and the growing season.
These results suggest that tri-trophic interactions were mainly controlled by the climatic context since consumers and their natural enemy responses were more dependent on the climatic context and growing seasons than on plant quality. Overall, we highlight the role of fluctuating abiotic resources and the heterogeneity within each trophic level in structuring tri-trophic interactions in forest ecosystems.
DOI: 10.17632/3dr9r3w3jn.2
title: An expertized grapevine disease image database focused on Flavescence dorée and its confounding diseases

description: Grapevine is a plant subject to many diseases, deficiencies and is vulnerable to many pests. The current disease controls consist in monitoring the vineyard and the spraying of phytosanitary products at the block scale. The automatic detection of disease symptoms would allow a reduction of these products for the treatment of these diseases before they spread. Flavescence dorée (FD) is one of the most monitored vine diseases in Europe as it decreases vine productivity while being very infectious and leading to significant yield losses. The diagnosis of FD is usually done by the association of symptoms on 3 organs (leaf, shoot and bunch). It is carried out by experts, as many others diseases and stresses, either biotic or abiotic, imply similar symptoms. These experts require a decision support tool to better plan their survey to improve the efficiency of their scouting.
To work towards this goal, a dataset composed of 1483 RGB images showing vines suffering from various diseases and stresses, was acquired. In particular, it is focused on the grapevine disease called Flavescence dorée (FD) and its confounding factors and diseases. Images of 5 grape varieties (Cabernet Sauvignon, Cabernet Franc, Merlot, Ugni Blanc and Sauvignon Blanc) were acquired during 2 years (2020 and 2021) in the field by proximal sensing. Images were taken through vine rows identified by scouting experts as containing many cases of FD. They pointed out vines affected by FD, ESCA or vines showing symptoms similar to those of FD. In order to see entire vines in the images, images were acquired at a distance between 1 and 2 meters depending on the row width. An industrial flash ensured a constant luminance on the images regardless of the environmental circumstances. 
Two types of annotations have been made. First, an annotation at the image scale: an annotation file containing the diagnosis of the experts at the vine scale was filled directly in the field for each image. Secondly, an annotation at the symptom scale: the same scouting experts were asked to annotate on a computer the symptoms present on the images. They annotated 744 images by creating bounding boxes around the interesting leaves and separated them into 3 classes: ‘FD symptomatic leaves’, ’Esca symptomatic leaves’ and ‘Confounding leaves’, this last class containing all the leaves different from healthy leaves. In addition, on 110 of these images, symptomatic bunches and shoots were respectively annotated by bounding boxes and broken lines. Finally, 128 segmentation masks were created in which each pixel was classified into 4 classes: either it was a pixel of a symptomatic shoot, a symptomatic bunch, a healthy bunch or a pixel of neither of these three.
DOI: 10.6084/m9.figshare.28239455
title: Development of SOA modules in the WRF-Chem model and evaluation of the key formation pathways of SOA and associated health risk over mainland China

description: The date for the study of Development of SOA modules in the WRF-Chem model and evaluation of the key formation pathways of SOA and associated health risk over mainland China.
DOI: 10.17632/3dr9r3w3jn.1
title: An expertized grapevine disease image database focused on Flavescence dorée and its confounding diseases

description: Grapevine is a plant subject to many diseases, deficiencies and is vulnerable to many pests. The current disease controls consist in monitoring the vineyard and the spraying of phytosanitary products at the block scale. The automatic detection of disease symptoms would allow a reduction of these products for the treatment of these diseases before they spread. Flavescence dorée (FD) is one of the most monitored vine diseases in Europe as it decreases vine productivity while being very infectious and leading to significant yield losses. The diagnosis of FD is usually done by the association of symptoms on 3 organs (leaf, shoot and bunch). It is carried out by experts, as many others diseases and stresses, either biotic or abiotic, imply similar symptoms. These experts require a decision support tool to better plan their survey to improve the efficiency of their scouting.
To work towards this goal, a dataset composed of 1483 RGB images showing vines suffering from various diseases and stresses, was acquired. In particular, it is focused on the grapevine disease called Flavescence dorée (FD) and its confounding factors and diseases. Images of 5 grape varieties (Cabernet Sauvignon, Cabernet Franc, Merlot, Ugni Blanc and Sauvignon Blanc) were acquired during 2 years (2020 and 2021) in the field by proximal sensing. Images were taken through vine rows identified by scouting experts as containing many cases of FD. They pointed out vines affected by FD, ESCA or vines showing symptoms similar to those of FD. In order to see entire vines in the images, images were acquired at a distance between 1 and 2 meters depending on the row width. An industrial flash ensured a constant luminance on the images regardless of the environmental circumstances. 
Two types of annotations have been made. First, an annotation at the image scale: an annotation file containing the diagnosis of the experts at the vine scale was filled directly in the field for each image. Secondly, an annotation at the symptom scale: the same scouting experts were asked to annotate on a computer the symptoms present on the images. They annotated 744 images by creating bounding boxes around the interesting leaves and separated them into 3 classes: ‘FD symptomatic leaves’, ’Esca symptomatic leaves’ and ‘Confounding leaves’, this last class containing all the leaves different from healthy leaves. In addition, on 110 of these images, symptomatic bunches and shoots were respectively annotated by bounding boxes and broken lines. Finally, 128 segmentation masks were created in which each pixel was classified into 4 classes: either it was a pixel of a symptomatic shoot, a symptomatic bunch, a healthy bunch or a pixel of neither of these three.
DOI: 10.17632/dyg5wyngb2.1
title: Dataset for Sac/CNF-Ag nanocomposite for antibacterial properties

description: The significance of sacran, TEMPO-CNF, and Sac/CNF-Ag nanocomposites is sufficiently supported by data. This is useful information for researchers studying polysaccharide applications. The study can also be used to create bio probes that release medications over an extended period of time for the treatment of cancer or other ailments.
DOI: 10.17632/8mz8929fhn.1
title: Biophysical contexture of coastal biofilm-sediments varies heterogeneously and seasonally at the centimeter scale across the bed-water interface

description: Coastal sediments filter and accumulate organic and inorganic materials from the terrestrial and marine environment, and thus provide a high diversity of microbial niches. However, sediment-based analyses typically examine bulk samples and seldom consider variation at a scale relevant to changes in environmental conditions, due to the lack of mid-long term field data which can cover both the seasonal and sediment depth variations. In this study, microbial production and bacterial community structure were determined together with grain parameters over 10 months of intertidal silty sands on Jiangsu Coast, China. We demonstrated that the microbiological effects did not merely present on the surface, but greatly varied and stratified in both physical and biological contexture within the top 4 cm layer. Bacterial community structure showed a clear vertical variation with higher operational taxonomic unit (OTU) numbers at 1~2 cm depth than in the top 2 mm, probably because of the decreasing disturbance by hydrodynamic forces. However, the microbial production rates and metabolic activities, represented by the production of extracellular polymeric substances (EPS), were always higher in the top. Seasonal changes were strongly reflected in the vertical patterns of EPS but could not explain the variation across sites. The overall EPS secretion in spring and summer was generally at high level than that in autumn and winter, with the maximum value of 5~6 times higher. Interestingly, the stratification of biological and physical properties followed a fixed relationship, where with the decrease of the grain size D50, the EPS content increased exponentially, and this relationship was independent of temporal or spatial variation. Despite the significant seasonal variation of microbial activity and sedimentary grain size individually, the basic function between EPS content and D50 however did not alter. Filling these knowledge gaps will not only help to decipher the fate of grain-biofilm aggregates and organic matter burial under global changes, but also provide field evidence for the development of sediment transport models as well as blue carbon models incorporating microbial processes.
DOI: 10.17632/56zrtnn7sh.2
title: Data for: Molecular transformation of petroleum compounds by hydroxyl radicals produced upon oxidation of reduced nontronite

description: Raw data for all figures in the manuscript and supplementary material by Liu et al. to be published by Geochimica et Cosmochimica Acta as "Molecular transformation of petroleum compounds by hydroxyl radicals produced upon oxidation of reduced nontronite".
DOI: 10.17632/c3yyxx54vf.1
title: LINF_350026000

description: kinesin
Leishmania infantum (strain JPCM5)
DOI: 10.17632/r6nskzsbz3.1
title: LINF_350026300

description: R-SNARE protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/v3dyp2gm97.1
title: LINF_350024900

description: U3 small nucleolar RNA-associated protein 6 | UTP6
Leishmania infantum (strain JPCM5)
DOI: 10.17632/hdbt3yx28j.1
title: Culturally-shaped Mindsets of Authoritarian Leadership: Power Motivation and Effectiveness Belief Promoted by Power Distance

description: Two studies were conducted in China and the US. The results demonstrated that leaders’ power distance boosts their belief in the effectiveness of discipline-focused authoritarian leadership and need for power, resulting in the manifestation of discipline- or dominance-focused authoritarian leadership, respectively. In addition, Chinese leaders exhibited higher power distance scores and stronger beliefs in the effectiveness of authoritarian leadership than US leaders.
DOI: 10.17632/y4g2gybd26.1
title: LDHU3_13.0120

description: Carboxypeptidase | CP1; Leishmania donovani (HU3 strain)
DOI: 10.17632/j53mcv2zrs.1
title: Dislocation-mediated interfacial re-equilibration of pyrite: An alternative model to interface-coupled dissolution-reprecipitation and gold remobilisation - Research data

description: Atom probe tomography and electron backscattered diffraction data of pyrite.
DOI: 10.17632/b9wpm4nrkw.1
title: LDHU3_13.0170

description: Kinesin-13 2 | KIN13-2; Leishmania donovani (HU3 strain)
DOI: 10.17632/d582rwxdfp.1
title: Physiological Metabolic Responses and Survival Rate of Hylurgus ligniperda to High Temperature Stress-new

description: We investigated the effects of heat-induced mortality and stress on the physiological metabolism of Hylurgus ligniperda under various high-temperature conditions. Specifically, we recorded the survival of H ligniperda adults and larvae under different high temperature treatments, and the changes in water content, fat, glycogen, protein, sorbitol, trehalose, and glycerol in response to heat stress.
DOI: 10.17632/gx4zgtg2ms.1
title: LDHU3_13.0150

description: Hypothetical protein - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/mwfhhjm7bm.1
title: LDHU3_13.0140

description: SURF1 family protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/nbj8x9rbx8.1
title: Eye-use preference and egg-inspection frequency predict egg recognition in a cuckoo host

description: One of the most effective strategies for avian hosts to defend against brood parasitism is to eject the parasitic egg from the focal nest. However, the variation in egg-rejection frequency between individuals remains poorly understood. A precondition for egg ejection is the recognition of the parasitic egg. Previous studies have shown that the left and right eye function differently when recognizing different objects, but few studies have tested the relationship between eye-use preference and egg-rejection probability. In this study, we investigated the relationship between eye-use preference and egg-rejection propensity in Daurian redstarts Phoenicurus auroreus, a common host of the common cuckoo Cuculus canorus. We found that redstarts exhibited an eye-use preference when inspecting eggs, but without a clear direction of the preference (left/right). In addition, redstarts did not change the eye-use preference when inspecting their own eggs or the foreign egg, but they spent longer time inspecting the foreign egg and inspected it more frequently than inspecting their own eggs. Moreover, females with a left-eye preference were more likely to recognize the foreign egg than individuals without an eye-use preference, and individuals who inspected the foreign egg more often were more likely to recognize the egg. Our results demonstrate that the left eye-use preference facilitates the host's ability to recognize the foreign egg.
DOI: 10.17632/6wsm754nz9.1
title: LDHU3_13.0230

description: Tetratricopeptide repeat - containing protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/djx3nh98yr.1
title: Elemental composition - metal rods from Jodłowno Hoard

description: Elemental composition (XRF) of metal rods from Jodłowno Hoard, northern Poland. Chronology: Early Iron Age
DOI: 10.17632/cy7922ftvp.1
title: Supplementary Information for Flexible Carbon Capture Using MOF Fixed Bed Reactors at an NGCC Plant

description: This Supplementary Information contains the details for the paper titled "Flexible Carbon Capture Using MOF Fixed Bed Reactors at an NGCC Plant".
DOI: 10.17632/cy7922ftvp.2
title: Supplementary Information for Flexible Carbon Capture Using MOF Fixed Bed Reactors at an NGCC Plant

description: Modeling data for the paper titled "Flexible Carbon Capture Using MOF Fixed Bed Reactors at an NGCC Plant" is published in here. This supplementary data includes the detailed process flow diagram of the integrated natural gas combined cycle and hybrid carbon capture system presented in this work. Equations and fitted parameters for the isotherm model for the Mg2(dobpdc)(3-4-3) metal oxide framework used in the fixed bed reactor system are also included here.
DOI: 10.17632/tntkwgx6dv.1
title: LDHU3_13.0220

description: MOZ/SAS family acetyltransferase | HAT4; Leishmania donovani (HU3 strain)
DOI: 10.17632/kct3xpddnd.1
title: LDHU3_13.0180

description: Mitoribosomal protein mL52; Leishmania donovani (HU3 strain)
DOI: 10.17632/h4j9jg5n74.1
title: LDHU3_13.0210

description: Protein kinase A regulatory subunit | PKA-R | FM458; Leishmania donovani (HU3 strain)
DOI: 10.17632/dx5kr8mjpk.1
title: LDHU3_18.1840

description: WD repeat-containing protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/7gs92fv6c8.1
title: LDHU3_18.1810

description: Calcium-binding domain-containing protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/v5xzd7cwk3.1
title: LDHU3_13.0270

description: ras-related protein RAB5B; Leishmania donovani (HU3 strain)
DOI: 10.17632/f9s3smbnch
title: LDHU3_18.1860

description: NADH-ubiquinone oxidoreductase complex I subunit | NDUFS1 ortholog; Leishmania donovani (HU3 strain)
DOI: 10.17632/f9s3smbnch.1
title: LDHU3_18.1860

description: NADH-ubiquinone oxidoreductase complex I subunit | NDUFS1 ortholog; Leishmania donovani (HU3 strain)
DOI: 10.17632/fbbk4r3tz4.1
title: Indicadores de acesso à miltefosina em Minas Gerais_2021 a 2024.

description: Estudo descritivo baseado em documentos normativos e dados secundários administrativos, gerados durante a solicitação e dispensação de miltefosina em Minas Gerais no período de maio de 2021 a abril de 2024, totalizando 36 meses. Objetivo: Descrever e avaliar os primeiros indicadores da implementação piloto da miltefosina em Minas Gerais para o tratamento da leishmaniose tegumentar (LT).
DOI: 10.17632/w7sjkydyhd.1
title: LDHU3_18.1850

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/zygzrnt5vt.1
title: LDHU3_18.1890

description: P-type H+ATPase | H1A-1; Leishmania donovani (HU3 strain)
DOI: 10.6084/m9.figshare.28234004
title: PlantVillage dataset

description: This is the PlantVillage dataset used in the paper "A dual-branch model combining convolution and Vision Transformer for crop disease classification." The original dataset paper: Hughes DP, Salathé M. An open access repository of images on plant health to enable the development of mobile disease diagnostics.The original dataset can be downloaded at https://www.kaggle.com/datasets/abdallahalidev/plantvillage-dataset.
DOI: 10.17632/mfm4hcywgf.1
title: LDHU3_18.1930

description: Kinesin; Leishmania donovani (HU3 strain)
DOI: 10.17632/8tf9sspd6b.1
title: Refractive index of 5 glycols and glycerol versus wavelength and temperature

description: The dataset consists of tables of refractive index values versus wavelength and temperature (n(lambda, T) for 6 hygroscopic organic liquids. Each table corresponds to one liquid: ethylene glycol, diethylene glycol, triethylene glycol, tetraethylene glycol, propylene glycol (propane-1,2-diol), and glycerol. The measurements cover the range from 390 to 1070 nm in wavelength and from 1 to 45ºC in temperature. Each data point corresponds to a mean value of several measurements. The outlaying measurement series were discarded. The accuracy of the refractive index measurement is estimated to be ±0.0003, while the accuracy of the wavelength measurement is ~1%, and the accuracy of the temperature measurement is −0.3/+0.6 K. The measurements were performed with a modified Abbe refractometer, calibrated with water at each temperature. For liquids other than ethylene glycol, the calibration at 1ºC was augmented with that for ethylene glycol. We sampled the following liquids: (i) ethylene glycol, anhydrous, 99.8% Sigma-Aldrich lot # STBG3967V; (ii) diethylene glycol, ≥99.0%, Sigma lot # BCBT4833; (iii) triethylene glycol, 99%, Alfa Aesar lot # 10198029; (iv) tetraethylene glycol, 99%, Alfa Aesar lot # M17E015; (v) propylene glycol (propane-1,2-diol), ≥99.5%, Sigma-Aldrich lot # MKC80613V; (vi) glycerol, BioUltra, anhydrous, ≥99.5%, Sigma lot # BCBS7814V.