cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5258/soton/d1709
title: Dataset "Improving the applicability of genetic algorithms to real problems"

description: Dataset for the thesis for the degree of Doctorate of Philosophy, University of Southampton 2021. "Improving the applicability of genetic algorithms to real problems", by Przemyslaw Andrzej Grudniewski. - The Dataset is separated according to chapters of the Thesis - In each chapter the data is separated into 3 main categories: a) Figures in folder "Figures"; b) Table data in folder "Processed Table Data"; and c) raw data files in folder "Raw Data" - Additionally, the code for the algorithm used to conduct all experiments is provided in "Additional_Data_Code_ReadMe.7z"
DOI: 10.5258/soton/wp00704
title: Unconstrained subnational Population Weighted Density in 2000, 2005, 2010, 2015 and 2020 ( 1km resolution )

description: Unconstrained subnational Population Weighted Density in 2000, 2005, 2010, 2015 and 2020 ( 1km resolution )
DOI: 10.15468/jnjmwy
title: A new genus of therevine stiletto flies from South America (Diptera: Therevidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Irwin, Michael E., Winterton, Shaun L. (2020): A new genus of therevine stiletto flies from South America (Diptera: Therevidae). Zootaxa 4838 (1): 52-70, DOI: https://doi.org/10.11646/zootaxa.4838.1.2
DOI: 10.6084/m9.figshare.13239110
title: Transvection regulates the sex-biased expression of a fly X-linked gene

description: The dataset contains fluorescent images of Drosophila melanogaster wings carrying different transgenes. The associated information are indicated in the relevant publication as well as on the name of its file. At last, there are confocal images where DNA FISH was performed.<br>
DOI: 10.6084/m9.figshare.13239110.v1
title: Transvection regulates the sex-biased expression of a fly X-linked gene

description: The dataset contains fluorescent images of Drosophila melanogaster wings carrying different transgenes. The associated information are indicated in the relevant publication as well as on the name of its file. At last, there are confocal images where DNA FISH was performed.<br>
DOI: 10.17632/cmzv9nz7tg.1
title: Data for: Resolving mid- to upper-crustal exhumation through apatite petrochronology

description: All data used in the manuscript is included as supplementary files.
DOI: 10.17632/ks38g8xpnh.1
title: Data for: Rift and salt-related multi-phased dolomitization: example from the northwestern Pyrenees

description: Supplementary data including all SIMS isotope data
DOI: 10.5258/soton/wp00703
title: Unconstrained subnational Population Weighted Density in 2000, 2005, 2010, 2015 and 2020 ( 100m resolution )

description: Unconstrained subnational Population Weighted Density in 2000, 2005, 2010, 2015 and 2020 ( 100m resolution )
DOI: 10.5281/zenodo.4114086
title: Multiplane microscopy dataset for benchmarking denoising methods

description: The dataset consists of 810 microscopy images collected from CHO, U2OS, and RPE1 cell lines in fluorescent and brightfield modalities. Cell lines were grown in standard medium, seeded on plates, fixed with formaldehyde, stained with a fluorescent dye (Hoechst33342) and imaged with PerkinElmer Phenix high-throughput confocal microscope in fluorescence and brightfield modalities using a 20x objective. For the fluorescent modality, images were acquired in low-exposure (20 ms) and high-exposure (100 ms) modes. For the brightfield, we used a single exposure (100 ms). Higher exposure time usually translates into better image quality, alleviating Poisson noise, however, it leads to sample degradation, and lower measurement speed. In total, three wells on a plate were imaged, one well per cell line, each with nine fields of view. Each field of view was imaged across ten focal planes separated by 2 micrometers in z-stack, resulting in 270 microscopy images of size 2160 x 2160 pixels per exposure time per modality. We used the following folder structure: /{well}_{cell line}/{modality}_{exposure time}/fov_{field of view}_plane_{plane}.png We recommend to use the first two wells (CHO and U2OS, 180 images) as a training set, the first three fields of view from the last well (RPE1, 30 images) as a validation set, and the last six fields of view (RPE1, 60 images) as a test set.
DOI: 10.5281/zenodo.4114085
title: Multiplane microscopy dataset for benchmarking denoising methods

description: The dataset consists of 810 microscopy images collected from CHO, U2OS, and RPE1 cell lines in fluorescent and brightfield modalities. Cell lines were grown in standard medium, seeded on plates, fixed with formaldehyde, stained with a fluorescent dye (Hoechst33342) and imaged with PerkinElmer Phenix high-throughput confocal microscope in fluorescence and brightfield modalities using a 20x objective. For the fluorescent modality, images were acquired in low-exposure (20 ms) and high-exposure (100 ms) modes. For the brightfield, we used a single exposure (100 ms). Higher exposure time usually translates into better image quality, alleviating Poisson noise, however, it leads to sample degradation, and lower measurement speed. In total, three wells on a plate were imaged, one well per cell line, each with nine fields of view. Each field of view was imaged across ten focal planes separated by 2 micrometers in z-stack, resulting in 270 microscopy images of size 2160 x 2160 pixels per exposure time per modality. We used the following folder structure: /{well}_{cell line}/{modality}_{exposure time}/fov_{field of view}_plane_{plane}.png We recommend to use the first two wells (CHO and U2OS, 180 images) as a training set, the first three fields of view from the last well (RPE1, 30 images) as a validation set, and the last six fields of view (RPE1, 60 images) as a test set.
DOI: 10.5519/qd.yqe2cgqd
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (10631 records)
DOI: 10.15468/3etkk3
title: Taxonomic revision of the Menticirrhus americanus (Linnaeus, 1758) and M littoralis (Holbrook, 1847) (Percomorphacea: Sciaenidae) species complexes from the western Atlantic

description: This dataset contains the digitized treatments in Plazi based on the original journal article Marceniuk, Alexandre Pires, Caires, Rodrigo Antunes, Rotundo, Matheus Marcos, Cerqueira, Najila Nolie Catarine Dantas, Siccha-Ramirez, Raquel, Wosiacki, Wolmar Benjamin, Oliveira, Claudio (2020): Taxonomic revision of the Menticirrhus americanus (Linnaeus, 1758) and M littoralis (Holbrook, 1847) (Percomorphacea: Sciaenidae) species complexes from the western Atlantic. Zootaxa 4822 (3): 301-333, DOI: https://doi.org/10.11646/zootaxa.4822.3.1
DOI: 10.15468/upc8mx
title: New species of Langona Simon, 1901 and Neaetha Simon, 1884 (Araneae Salticidae) from Thailand

description: This dataset contains the digitized treatments in Plazi based on the original journal article Żabka, Marek, Patoleta, Barbara M. (2020): New species of Langona Simon, 1901 and Neaetha Simon, 1884 (Araneae Salticidae) from Thailand. Zootaxa 4899 (1): 374-383, DOI: https://doi.org/10.11646/zootaxa.4899.1.19
DOI: 10.6084/m9.figshare.13622153
title: Emotional boundaries for public participation

description: The data were obtained through online participatory mapping for the urban contest "Periphery's resource" in 2020 in St. Petersburg, Russia. The data include layers with places where people went one usual day, places people like and dislike, and places which people would love to preserve or improve. Also, a analytical layer with 109 popular (with 2 or more markers) daily places is included. The table includes two sheets. The first sheet defines 109 popular daily places and the second sheet defines the age and gender of the participants' sample.
DOI: 10.5258/soton/d1554
title: Dataset for "Towards Generating SPARK from Event-B Models"

description: Dataset supports: Sritharan, S & Hoang, TS 2020, Generating SPARK from Event-B Models. in Proceedings of the 16th International Conference on integrated Formal Methods. The 16th International Conference on integrated Formal Methods, Lugano, Switzerland, 16/11/20.
DOI: 10.6084/m9.figshare.13436432
title: Data supporting Kuppler et al. (2021) in AoBPlants

description: This data set & R Code supports the following publication:<br>Kuppler J, Wieland J, Junker RR & Ayasse M (2021) Drought-induced reduction in flower size and abundance correaltes with reduced visits by bumble bees. AoBPlants. https://doi.org/10.1093/aobpla/plab001<br>See readme file for further explanation<br>ORCID id Jonas Kuppler: https://orcid.org/0000-0003-4409-9367<br><br>
DOI: 10.6084/m9.figshare.13436432.v2
title: Data supporting Kuppler et al. (2021) in AoBPlants

description: This data set & R Code supports the following publication:<br>Kuppler J, Wieland J, Junker RR & Ayasse M (2021) Drought-induced reduction in flower size and abundance correaltes with reduced visits by bumble bees. AoBPlants. https://doi.org/10.1093/aobpla/plab001<br>See readme file for further explanation<br>ORCID id Jonas Kuppler: https://orcid.org/0000-0003-4409-9367<br><br>
DOI: 10.6084/m9.figshare.13436432.v1
title: Data supporting Kuppler et al. (2020) in AoBPlants

description: This data set & R Code supports the following publication:<br>Kuppler J, Wieland J, Junker RR & Ayasse M (2021) Drought-induced reduction in flower size and abundance correaltes with reduced visits by bumble bees. AoBPlants. https://doi.org/10.1093/aobpla/plab001<br>See readme file for further explanation<br>ORCID id Jonas Kuppler: https://orcid.org/0000-0003-4409-9367<br><br>
DOI: 10.6084/m9.figshare.13013282.v3
title: Data supporting Kuppler et al. (2020) in BMC Ecology

description: This data set supports the following publication: <br><br>Peuker MA, Burger H, Krausch S, Neumüller U, Ayasse M & Kuppler J (2020) Floral traits are associated with the quality but not the quantity of heterospecific stigmatic pollen loads. BMC Ecology 20:54. https://doi.org/10.1186/s12898-020-00323-5<br>See Read me-file for further explanation<br>ORCID id Jonas Kuppler: https://orcid.org/0000-0003-4409-9367
DOI: 10.6084/m9.figshare.13013282
title: Data supporting Kuppler et al. (2020) in BMC Ecology

description: This data set supports the following publication: <br><br>Peuker MA, Burger H, Krausch S, Neumüller U, Ayasse M & Kuppler J (2020) Floral traits are associated with the quality but not the quantity of heterospecific stigmatic pollen loads. BMC Ecology 20:54. https://doi.org/10.1186/s12898-020-00323-5<br>See Read me-file for further explanation<br>ORCID id Jonas Kuppler: https://orcid.org/0000-0003-4409-9367
DOI: 10.6084/m9.figshare.13013282.v2
title: Data supporting Kuppler et al. (2020) in BMC Ecology

description: This data set supports the following publication: <br><br>Peuker MA, Burger H, Krausch S, Meumüller U, Ayasse M & Kuppler J (2020) Floral traits are associated with the quality but not the quantity of heterospecific stigmatic pollen loads. BMC Ecology <br><br>See Read me-file for further explanation<br>
DOI: 10.5258/soton/d1671
title: Vehicle-to-Grid (V2G) for Road-to-Rail Energy Exchange (R2REE); Aggregator Control Code

description: V2G aggregator control code developed for thesis 'Vehicle-to-Grid for Road-to-Rail Energy Exchange: Using aggregated electric vehicles to provide large-scale energy storage support for electric rail systems'.
DOI: 10.5258/soton/d1716
title: Dataset for Simulation of 2-Coil and 4-Coil Magnetic Resonance Wearable WPT Systems

description: Dataset contains the simulation results that plotted in figures of open access MDPI Proceedings Simulation of 2-Coil and 4-Coil Magnetic Resonance Wearable WPT Systems
DOI: 10.17632/rpsvy6b23g.2
title: Impact of augmented reality on optometric parameters and fatigue symptoms

description: In this work (availble online https://www.sciencedirect.com/science/article/pii/S0141938221000020?dgcid) we assessed if using augmented reality (AR) instructions to guide a manual task, could potentially impact the visual system of operators. A before/after design study was carried out asking participants (N=23) to perform LEGO assemblies for 30 minutes with paper or AR instructions. The effects of using AR (optical see-through) compared to paper instructions were evaluated, on binocular vision with classical optometric measurements, and on visual fatigue with the Virtual Reality Symptoms Questionnaire. This dataset contains two files : 1. Optometric measurements : Raw data for monocular visual acuity, stereoacuity, vertical fixation disparity, vertical phoria, amplitude of fusion, monocular accommodation amplitude. Data are available for the four different blocks, i.e., with AR instructions, paper instructions, before and after. 2. Virtual reality symptoms questionnaire Raw data for the 13 symptoms items Data are available for the four different blocks, i.e., with AR instructions, paper instructions, before and after. For each file, a dataset description is included to explain content and column headings. For most optometric measurements, no clinically significant changes were found for AR and paper instructions, and only negligible fatigue symptoms were found specifically for AR. Results from both objective and subjective measurements suggest that there is no impact of AR on the oculomotor system and that in this specific use case, AR can be safely used for production operators.
DOI: 10.17632/dm6m5cw7vn.1
title: Metabolomic profiling of primary leukemia samples

description: Metabolomic profiling results of flash frozen bone marrow samples from a cohort of T-cell acute leukemia samples (n = 22, including ETP-ALL (n = 9) and T-ALL (n = 13), categorized by immunophenotype and genetic alterations) by chromatography-tandem mass spectrometry. Quantitative profiling of 403 named cellular metabolites normalized for sample weight and protein content.
DOI: 10.17632/wbcg8dk4st.1
title: LINF_350019200

description: 60S ribosomal protein L2; Leishmania infantum
DOI: 10.17632/h87dchbtz5.1
title: LINF_350019300

description: 60S ribosomal protein L2; Leishmania infantum
DOI: 10.17632/ydtd7p8wws.1
title: LINF_350019400

description: 60S ribosomal protein L2; Leishmania infantum
DOI: 10.17632/7dgch2pnhy.1
title: LINF_350019500

description: 60S ribosomal protein L2; Leishmania infantum
DOI: 10.17632/gzfgd727sm.1
title: LINF_320046200

description: 60S ribosomal protein L2; Leishmania infantum
DOI: 10.17632/jskgkdvfwx.1
title: JMD-LJ-2021-2

description: CNVs from targeted NGS data for JMD manuscript entitled "Clinical Utility of Targeted Next-Generation Sequencing Assay to Detect Copy Number Variants associated with myelodysplastic syndrome in Myeloid Malignancies"
DOI: 10.17632/d7ttdszxyw.1
title: Do Latitudinal and bioclimatic gradients drive parasitism in Odonata?

description: This dataset provides supplementary material that supported the paper entitled "Do Latitudinal and bioclimatic gradients drive parasitism in Odonata?", submitted to the International Journal of Parasitology. Data consist in .nex files for phylogenetic trees of Odonata adapted from Waller, J.T., Svensson, E.I., 2017. Body size evolution in an old insect order: No evidence for Cope’s Rule in spite of fitness benefits of large size. Evolution (N. Y). 71, 2178–2193. https://doi.org/10.1111/evo.13302. These trees contain only those species for which we found enough data to conduct the analysis. We used Generalised Linear Mixed Models using Markov Chain Monte Carlo analysis with bioclimatic variables and data of parasite prevalence retrieved from literature. These data allowed us to build Bayesian phylogenetic comparative models to test if latitudinal and bioclimatic gradients drive parasitism in Odonata.
DOI: 10.17632/8n5f23j4s8.1
title: Data sheets & metadata for "When Introduced Prey Violates Trophic Hierarchy: Conservation of an Endangered Predator"
DOI: 10.17632/4n6f23zzfs.1
title: Creating early Type 1 Diabetes Mellitus in chick embryos with the air sack model

description: Background: Diabetes Mellitus (DM) is a metabolic disease characterized by hyperglycemia. Chronic hyperglycemia is associated with long-term dysfunction such as retinopathy, nephropathy, neuropathy and cardiovascular diseases. These complications increase rates of death and disability worldwide. Due to the negative effects of DM on the quality of life, the mechanism and treatments of the disease should be investigated in more detail. Most of the research in diabetes is performed in experimental animals. Experimental animal models contributed to the advancement of clinical research, the development of new therapeutic approaches, the discovery of insulin and the purification of insulin. There are many animal models of DM in the literature. These models are mainly classified by the type of diabetes as spontaneous or induced. Induced DM models are two types, surgical and non-surgical models. But there are a few DM model studies created with chick embryos. In these studies, it was seen that there were differences in STZ doses and STZ administration technique. The objective of this study was to create more acceptable and easier DM model. Methods: 180 specific pathogen free (SPF) fertilized chicken eggs (White Leghorn chicken) were used in this study. STZ was administered to 160 SPF eggs for induced DM model. The remaining 20 SPF eggs were separated as a control group. We used two different DM models (Air sack model (ASM) and Chorioallantoic membrane model (CAMM)) and blood sampling technique in our study. 160 SPF eggs were divided into two groups with 80 eggs in each group, according to the model in which STZ was administered. Results: When the relationship between blood glucose and blood insulin levels were examined, it was determined that there was a significantly strong negative correlation in the control group and ASM 1 group; and a significantly very strong negative correlation was found in the ASM 2 group and ASM 3 group. Our data indicate that the optimal STZ dose to create a DM model was 0.45 mg/egg and the best DM model was ASM. Conclusion: The second technique to be the best blood sampling technique for determining blood glucose levels. We believe that ASM can be used in DM studies and anti-DM drug studies in terms of its easebly, applicability, reproducibility and low cost.
DOI: 10.17632/8ybyd5ybfd.1
title: Data for: Permeability of microporous volcanic rocks in vapor-dominated geothermal systems: A case study from Los Humeros, Mexico.

description: The seven analyzed samples are contained in this dataset, from L2 to L7, using L6 a and b as two different lithologies were found in this sample. The FilteredVectors .xlsx files contain two vectors: -The first corresponding to the sample greyscale range after XCT cylinder cropping into a cubic image, and after the double filtering procedure. As filtering and cropping in some cases eliminate part of the greyscale range, the final vector can be less than the 16-bit range initially used. -The second vector corresponds to the voxel count per specific greyscale value. These two vectors are the input files to the ih-house matlab code used to determine microporosity. SubPoreResults .xlsx files contain the results directly obtained from the application of our code, as the main output is an .xlsx file. These results contemplate the following parameters: -Otsu_min: thresholding low value -Otsu_max: thresholding high value -Peak_localization: max voxel count peak greyscale localization -Porosity: macroporosity volume fraction -Intermediate: volume fraction contained between the two Otsu threshold values -Macrosolid: resolved solid fraction -Microporosity: volume fraction of the unresolved porosity -Total_porosity: sum of the macro and micro porosity volume fractions -Microsolid: volume fraction of the unresolved solid phase -Total_solid: sum of micro and macro solid phases -Thresholding-close: total porosity volume fraction which can be obtained using the closest integer greyscale value, which is needed for subsequent segmentation and permeability simulations. -New_thresholding_value: integer greyscale value corresponding to the total_porosity volume fraction. The Circulation Loss and Temperature .txt files, correspond to the CFE provided well data logs used for microporosity correlation.
DOI: 10.17632/pdty55b8m6.2
title: News Deserts Dataset

description: Dataset for the manuscript Digital Inequalities and Incidental News Exposure on Social Media Platforms.
DOI: 10.17632/ssk8krmw42.1
title: Ferroelectric energy harvest and storage cell

description: It is estimated that 71% of the energy generated for transportation is wasted, 66% is wasted in electricity, 20% is wasted in commercial and residential buildings, and 20% is wasted in industry or manufacturing. This wasted energy is primarily in the form of heat. Several solutions have been attempted and implemented to harvest the wasted heat such as those based on Thermoelectrics (TEs), Pyroelectrics (PEs), and Ferroelectrics (FEs). Nonetheless, the FEs are the most efficient active materials in devices working under the thermoelectric and pyroelectric principles. Herein, we show self-charge while discharging with a load. We point out that even if there is a gradient effect while using an air or argon blower, the same effect is observed at a constant temperature.
DOI: 10.17632/zpt52wg33c.1
title: A raw data relative to each experimental repeat of Agronomic traits, Grain quality traits and Grain micronutrient content as influenced by seeding rate, variety and micronutrients

description: This field experiment was conducted Split-split plot design was applied. Two durum wheat varieties were assigned to the main plot, micronutrient to the subplots, and seeding rates to the sub-sub plots. The two durum wheat varieties were sown under four levels of seeding rate (100, 125, 150, and 175 kg ha-1). Micronutrients (ZnSO4 and FeSO4) were supplied during the early grain filling stage both at a rate of 25 kg ha-1. The result showed that an increase in the seeding rate up to 175 kg ha-1 caused a significant (P = 0.05) grain yield improvement by about 23.5% and biomass by 21.5%. However, except plant height, most of the yield components like thousand-grain weight, seeds spike-1, spike length, and a number of seeds spike-1 significantly (P = 0.05) decreased markedly with increasing in the seeding rate. The grain qualitative traits such as grain protein content, gluten content, and Zeleny index decreased with the seeding rate increased. The response of the tested varieties was different from the changing seeding rate. Foliar application of FeSO4 has significantly ameliorated grain quality traits. In a dryland environment, the grain protein content was significantly higher than in a wet environment. The study inferred that a higher seeding rate (175 kg ha-1) increased both biomass and grain yield. Optimization of seeding rate was varied from agro-ecology to agro-ecology. Farmers and extension workers, therefore, consider varietal and location differences during seeding rate recommendation.
DOI: 10.17632/rczwc8fm3w.1
title: Data Regarding the Overconfidence of Managers and Accountants

description: The data were obtained through an experiment with managers and accountants. The research aimed to analyze whether the type, positive or negative, and the level, simple or complex, of economic-financial information influence the overconfidence of manager and accountants in a managerial decision-making process.
DOI: 10.17632/2wrgws3545.1
title: Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity. Thomson et al
DOI: 10.17632/ghn2rd47xx.1
title: Flow Stress Data

description: The data set contains experimental results of the isothermal compression test carried in Gleeble 3500 and Rolling data of plate rolling of experimental steel.
DOI: 10.17632/sx47m336t8.3
title: Thermal Maturation effect on TOC

description: Data for Experimental study on the effect of thermal maturation on TOC
DOI: 10.13145/bacdive121739.20191129.4.1
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.