cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.z4pkzn
title: Occurrence Download

description: A dataset containing 308 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Portugal",
 "TaxonKey is Zostera noltii Hornem."
 ]
}

 The dataset includes 308 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074085-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.grvkuq
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boesenbergia violacea (K.Larsen & Triboun) Mood & L.M.Prince"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062352-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8kql8b
title: Occurrence Download

description: A dataset containing 375 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ammannia senegalensis Lam."
 ]
}

 The dataset includes 375 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038224-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m3pru7
title: Occurrence Download

description: A dataset containing 347 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trogoderma granarium Everts, 1898"
 ]
}

 The dataset includes 347 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115250-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8yxu4w
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elatostema perlongifolium Elmer"
 ]
}

 The dataset includes 16 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0042336-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wzklon
title: Occurrence Download

description: A dataset containing 37871 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypericum humifusum L.",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 37871 records from 200 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038225-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ymnnn
title: Occurrence Download

description: A dataset containing 485 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Inventaire Odonates-Rhopalocères 1999-2002 du PNRLG-Données rhopalocères"
 ]
}

 The dataset includes 485 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006556-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.78q344
title: Occurrence Download

description: A dataset containing 202 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nomascus concolor (Harlan, 1826)"
 ]
}

 The dataset includes 202 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045446-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zdvatj
title: Occurrence Download

description: A dataset containing 8351 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Bubalornis albirostris (Vieillot, 1817)"
 ]
}

 The dataset includes 8351 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059037-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lfvsgh
title: Occurrence Download

description: A dataset containing 20006 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypericum montanum L.",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 20006 records from 164 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038227-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6cy7yk
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-129.22811398354875 69.01806698002346,-126.07300235017624 69.01806698002346,-126.07300235017624 72.17317861339598,-129.22811398354875 72.17317861339598,-129.22811398354875 69.01806698002346))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Oligochaeta"
 ]
}

 The dataset's 1 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0199586-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m5dqtm
title: Occurrence Download

description: A dataset containing 4714 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Formicarius nigricapillus Ridgway, 1893"
 ]
}

 The dataset includes 4714 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059050-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lofk9t
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is FLOTROP, a massive contribution to plant diversity data for open ecosystems in Tropical Africa.",
 "TaxonKey is Rotala elatinoides (DC.) Hiern"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038227-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rxyxpz
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Eubule Stål, 1868"
 ]
}

 The dataset includes 37 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001421-210819072339941/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dc1mqz
title: Occurrence Download

description: A dataset containing 284327 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypericum perforatum L.",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 284327 records from 750 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038228-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nrd9bm
title: Occurrence Download

description: A dataset containing 73803 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Forpus conspicillatus (Lafresnaye, 1848)"
 ]
}

 The dataset includes 73803 records from 318 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059054-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2t49c6
title: Occurrence Download

description: A dataset containing 11231909 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 11231909 records from 1327 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049827-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.djlkxh
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-162.89648 14.16214,-151.36523 14.16214,-151.36523 25.51468,-162.89648 25.51468,-162.89648 14.16214))",
 "HasCoordinate is true",
 "TaxonKey is Cyanea tritomantha A.Gray",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015958-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3jhsur
title: Occurrence Download

description: A dataset containing 268 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Polypremum L.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 268 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0171558-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qdazu5
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Brassia arcuigera Rchb.f."
 ]
}

 The dataset includes 22 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0268964-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t6hdn3
title: Occurrence Download

description: A dataset containing 8733 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Laguncularia racemosa (L.) C.F.Gaertn."
 ]
}

 The dataset includes 8733 records from 262 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0217078-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bnqc30
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ara rubrogenys Lafresnaye, 1847"
 ]
}

 The dataset includes 83 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015958-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.awzfgd
title: Occurrence Download

description: A dataset containing 53675 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salix L.",
 "BasisOfRecord is one of (Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Continent is North America"
 ]
}

 The dataset includes 53675 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0171530-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/11179108
title: Europe mothers
DOI: 10.15468/dl.k75mfe
title: Occurrence Download

description: A dataset listing the 10 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chinchilla Bennett, 1829"
 ]
}

 The dataset's 10 records were derived from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002923-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.axkb2r
title: Occurrence Download

description: A dataset containing 4366 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 {
 "or" : [
 "Geometry POLYGON((-124.40433 35.49705,-124.14091 35.49705,-124.14091 36.55077,-124.40433 36.55077,-124.40433 35.49705))",
 "Geometry POLYGON((-125.19462 29.43818,-68.03052 29.43818,-68.03052 47.08793,-125.19462 47.08793,-125.19462 29.43818))"
 ]
 },
 "TaxonKey is Bromus tectorum L."
 ]
}

 The dataset includes 4366 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002927-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.svskxu
title: Occurrence Download

description: A dataset containing 64884 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aedes aegypti (Linnaeus, 1762)"
 ]
}

 The dataset includes 64884 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002924-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aamhpc
title: Occurrence Download

description: A dataset containing 919 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chinchilla Bennett, 1829"
 ]
}

 The dataset includes 919 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002929-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.grvnjt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "SpeciesKey is Sturnella neglecta",
 "HasCoordinate is TRUE",
 "Year is 2024"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002930-250325103851331/datasets/export for details.
DOI: 10.6084/m9.figshare.25962184
title: Developing generalized flow-ecology relationships for salmonids

description: This represents supporting data and ancillary material used for the development of flow-ecology relationships for salmonids, as described in Rosenfeld and Enright (2024): <i>Developing generalized flow-ecology relationships for stream salmonids: ecological context resolves variation in response to altered flows.</i>
DOI: 10.15468/dl.ammanp
title: Occurrence Download

description: A dataset containing 6189 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eleutherodactylus coqui Thomas, 1966"
 ]
}

 The dataset includes 6189 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002932-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14969184
title: WSIs UCD Part Two
DOI: 10.5281/zenodo.14969185
title: WSIs UCD Part Two
DOI: 10.5281/zenodo.15092861
title: n(z): redshift bin distribution

description: Example redshift bin distribution for a synthetic photometric galaxy survey. Contains 6 redshift bins.
DOI: 10.5281/zenodo.15092862
title: n(z): redshift bin distribution

description: Example redshift bin distribution for a synthetic photometric galaxy survey. Contains 6 redshift bins.
DOI: 10.15468/dl.8p3et8
title: Occurrence Download

description: A dataset containing 113627 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Coprinus comatus (O.F.Müll.) Pers."
 ]
}

 The dataset includes 113627 records from 458 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002931-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15036730
title: Asymmetric and Asynchronous Carbon Dynamics in Mangrove Ecosystems: Implications for Restoration Strategies
title: data and code

description: The code and data for the paper(Asymmetric and Asynchronous Carbon Dynamics in Mangrove Ecosystems: Implications for Restoration Strategies)
DOI: 10.5281/zenodo.15036708
title: Asymmetric and Asynchronous Carbon Dynamics in Mangrove Ecosystems: Implications for Restoration Strategies
title: data and code

description: The code and data for the paper(Asymmetric and Asynchronous Carbon Dynamics in Mangrove Ecosystems: Implications for Restoration Strategies)
DOI: 10.5281/zenodo.15036707
title: Asymmetric and Asynchronous Carbon Dynamics in Mangrove Ecosystems: Implications for Restoration Strategies
title: data and code

description: The code and data for the paper(Asymmetric and Asynchronous Carbon Dynamics in Mangrove Ecosystems: Implications for Restoration Strategies)
DOI: 10.5281/zenodo.15092863
title: Asymmetric and Asynchronous Carbon Dynamics in Mangrove Ecosystems: Implications for Restoration Strategies
title: data and code

description: The code and data for the paper(Asymmetric and Asynchronous Carbon Dynamics in Mangrove Ecosystems: Implications for Restoration Strategies)
DOI: 10.5281/zenodo.15080630
title: Multiphoton intravital microscopy in small animals of long-term mitochondrial dynamics based on Super‐Resolution Radial Fluctuations

description: The raw data used for drawing plots.
DOI: 10.5281/zenodo.15080631
title: Multiphoton intravital microscopy in small animals of long-term mitochondrial dynamics based on Super‐Resolution Radial Fluctuations

description: The raw data used for drawing plots.
DOI: 10.5281/zenodo.15092883
title: XALQ OG'ZAKI IJODIDA "XALQ QO'SHIQLARI"NING O'RGANILISHI VA O'QITILISHIGA DOIR USULLAR TADQIQI
DOI: 10.5281/zenodo.15092884
title: XALQ OG'ZAKI IJODIDA "XALQ QO'SHIQLARI"NING O'RGANILISHI VA O'QITILISHIGA DOIR USULLAR TADQIQI
DOI: 10.5281/zenodo.15092891
title: XALQ OG'ZAKI IJODIDA "BOLALAR FOLKLORI"NI O'RGANISH VA  O'QITISH USULLARI
DOI: 10.5281/zenodo.15092892
title: XALQ OG'ZAKI IJODIDA "BOLALAR FOLKLORI"NI O'RGANISH VA  O'QITISH USULLARI
DOI: 10.5281/zenodo.13910842
title: Supplementary Material: Decoding sequence determinants of gene expression in diverse cellular and disease states

description: Supplementary material for the following publication:

Decoding sequence determinants of gene expression in diverse cellular and disease states

Avantika Lal*,1, Alexander Karollus*,1,2,3, Laura Gunsalus1, David Garfield4, Surag Nair1, Alex M Tseng1, M Grace Gordon5, Jenna L Collier1, Nathaniel Diamant1, Tommaso Biancalani1, Hector Corrada Bravo1, Gabriele Scalia1, Gokcen Eraslan1

*Equal contributions

1Biology Research | AI Development, gRED Computational Sciences, Genentech, South San Francisco, CA 94080, USA

2School of Computation, Information and Technology, Technical University of Munich, Germany

3Munich Center for Machine Learning  

4OMNI Bioinformatics and Department of Regenerative Medicine, Genentech, South San Francisco, CA 94080, USA

5 Department of Cellular and Tissue Genomics, Genentech Research and Early Development, Genentech, South San Francisco, CA 94080, USA

Correspondence: Avantika Lal (lal.avantika@gene.com), Gokcen Eraslan (eraslan.gokcen@gene.com)
DOI: 10.5281/zenodo.14768021
title: Supplementary Material: Decoding sequence determinants of gene expression in diverse cellular and disease states

description: Supplementary material for the following publication:

Decoding sequence determinants of gene expression in diverse cellular and disease states

Avantika Lal*,1, Alexander Karollus*,1,2,3, Laura Gunsalus1, David Garfield4, Surag Nair1, Alex M Tseng1, M Grace Gordon5, John Blischak6, Bryce van de Geijn6, Tushar Bhangale6, Jenna L Collier1, Nathaniel Diamant1, Tommaso Biancalani1, Hector Corrada Bravo1, Gabriele Scalia1, Gokcen Eraslan1

*Equal contributions

1Biology Research | AI Development, gRED Computational Sciences, Genentech, South San Francisco, CA 94080, USA

2School of Computation, Information and Technology, Technical University of Munich, Germany

3Munich Center for Machine Learning  

4OMNI Bioinformatics and Department of Regenerative Medicine, Genentech, South San Francisco, CA 94080, USA

5 Department of Cellular and Tissue Genomics, Genentech Research and Early Development, Genentech, South San Francisco, CA 94080, USA

6 Department of Human Genetics, Genentech, South San Francisco, CA 94080, USA

Correspondence: Avantika Lal (lal.avantika@gene.com), Gokcen Eraslan (eraslan.gokcen@gene.com)
DOI: 10.5281/zenodo.15092691
title: Supplementary Material: Decoding sequence determinants of gene expression in diverse cellular and disease states

description: Supplementary material for the following publication:

Decoding sequence determinants of gene expression in diverse cellular and disease states

Avantika Lal*,1, Alexander Karollus*,1,2,3, Laura Gunsalus1, David Garfield4, Surag Nair1, Alex M Tseng1, M Grace Gordon5, John Blischak6, Bryce van de Geijn6, Tushar Bhangale6, Jenna L Collier1, Nathaniel Diamant1, Tommaso Biancalani1, Hector Corrada Bravo1, Gabriele Scalia1, Gokcen Eraslan1

*Equal contributions

1Biology Research | AI Development, gRED Computational Sciences, Genentech, South San Francisco, CA 94080, USA

2School of Computation, Information and Technology, Technical University of Munich, Germany

3Munich Center for Machine Learning  

4OMNI Bioinformatics and Department of Regenerative Medicine, Genentech, South San Francisco, CA 94080, USA

5 Department of Cellular and Tissue Genomics, Genentech Research and Early Development, Genentech, South San Francisco, CA 94080, USA

6 Department of Human Genetics, Genentech, South San Francisco, CA 94080, USA

Correspondence: Avantika Lal (lal.avantika@gene.com), Gokcen Eraslan (eraslan.gokcen@gene.com)
DOI: 10.15468/dl.jx7tzd
title: Occurrence Download

description: A dataset containing 81125 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coprinus comatus (O.F.Müll.) Pers.",
 "Continent is Europe",
 "Year is greater than or equal to 2008"
 ]
}

 The dataset includes 81125 records from 201 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002933-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c8jtz6
title: Occurrence Download

description: A dataset containing 3355 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Agave salmiana Otto ex Salm-Dyck"
 ]
}

 The dataset includes 3355 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002935-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.