cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29618978.v1
title: Alzheimer’s Disease Signatures in the Brain Transcriptome of Estuarine Dolphins

description: Climate warming is one factor increasing the severity of harmful algal blooms (HABs). Innovative exposure models are needed to understand how HABs affect brain health. Here, we examined HAB exposure on the brain transcriptome of dolphins found stranded in Florida’s Indian River Lagoon. We report the neurotoxin 2,4-diaminobutyric acid (2,4-DAB) is 2,900 times more concentrated in dolphin brains during bloom seasons than non-bloom seasons. The same dolphins show 536 differentially expressed genes (FDR&lt;0.05) whose enrichment reveal impairment in GABAergic synapses, basement membrane alteration, and Alzheimer’s disease (AD) risk that is observed to increase with each subsequent bloom season. Dolphins also display concurrent AD-like neuropathological changes and elevated AD gene expression with 2,4-DAB exposure. Our study demonstrates disproportionate seasonal exposure to 2,4-DAB increases AD signatures in the brain transcriptome. As our climate warms, HABs will continue to intensify. Understanding the impact of HAB exposures will help to identify populations at risk for neurological illnesses.
DOI: 10.15468/dl.bsmuj4
title: Occurrence Download

description: A dataset containing 99473 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Elanus caeruleus)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 99473 records from 624 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029136-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tyygv3
title: Occurrence Download

description: A dataset containing 355 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neovison vison",
 "HasCoordinate is true",
 "Country is Germany"
 ]
}

 The dataset includes 355 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000623-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ub52qy
title: Occurrence Download

description: A dataset containing 730 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Samia cynthia Drury, 1773",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 730 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130302-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8pstha
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brassica somalensis Hedge & A.G.Mill."
 ]
}

 The dataset includes 12 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0148004-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ntmzqb
title: Occurrence Download

description: A dataset containing 1960 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Cupania scrobiculata Rich., Cupania scrobiculata f. frondosa (Benth.) Radlk., 1879, Cupania scrobiculata f. guianensis (Miq.) Radlk., 1879, Cupania scrobiculata var. guianensis (Miq.) Uittien, 1937, Cupania scrobiculata Hook. & Arn., Cupania scrobiculata Kunth, Cupania scrobiculata var. reticulata (Cambess.) Radlk., Cupania scrobiculata var. scrobiculata)"
 ]
}

 The dataset includes 1960 records from 141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0280176-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zsx2s9
title: Occurrence Download

description: A dataset containing 2400 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Plantae)",
 "Year is greater than or equal to 2012",
 "Year is less than or equal to 2022",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry MULTIPOLYGON (((-62.64377285656809 -22.23889997493114, -62.25890000155749 -21.05694601191141, -62.26944594452442 -20.56222697437528, -61.74249983029318 -19.64499983355159, -59.98180897900488 -19.29680903678644, -59.09583594355303 -19.34889083050291, -58.15097282969242 -19.83110892997018, -58.15889087836814 -20.16805490067981, -57.81459079342989 -20.97875509264463, -57.98510887934623 -22.09182707809038, -56.87749988312947 -22.27417286761067, -56.39652699920134 -22.06868196114925, -56.20291794343865 -22.27472707905014, -55.84972683850117 -22.28889081907562, -55.60917292221632 -22.63847301177174, -55.41209090868222 -23.95430893529215, -55.03139073272217 -23.99444601403593, -54.62569991237473 -23.80492699175812, -54.24389986307693 -24.05360900721286, -54.59891788763565 -25.57322693477039, -54.69319988174936 -26.42805499723005, -54.96333588135582 -26.78319992380324, -55.54749971666945 -27.11222684000865, -55.73167292872517 -27.43667304611608, -56.14402685920152 -27.31146384085525, -56.39805485251651 -27.58444599951196, -57.79139102647997 -27.29222703773792, -58.60461785934501 -27.31691794526682, -58.65209094740663 -27.15889090677354, -58.18167289126274 -26.65610881363625, -58.14472680306665 -26.20694592290022, -57.57666393324575 -25.54944596665268, -57.76110888660304 -25.171527073812, -58.80791790394829 -24.78152700861477, -60.03806378704792 -24.0097270617577, -61.01069983424378 -23.81083589823714, -62.64377285656809 -22.23889997493114)))"
 ]
}

 The dataset includes 2400 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0169753-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mcgu4t
title: Occurrence Download

description: A dataset containing 163 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brassica deflexa Boiss."
 ]
}

 The dataset includes 163 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147974-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y89rzg
title: Occurrence Download

description: A dataset containing 1259 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acosmeryx naga Moore",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1259 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130307-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sqyf9q
title: Occurrence Download

description: A dataset containing 22074 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thesium humifusum DC."
 ]
}

 The dataset includes 22074 records from 282 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0185197-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bp6nzk
title: Occurrence Download

description: A dataset containing 649629 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2022-09-03",
 "EventDate is less than or equal to 2022-10-03",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 649629 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130294-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dwxkd3
title: Occurrence Download

description: A dataset containing 4549 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brassica fruticulosa Cirillo"
 ]
}

 The dataset includes 4549 records from 147 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147980-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d223np
title: Occurrence Download

description: A dataset containing 720 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-6410.0",
 "Month is one of (February, January)",
 "TaxonKey is Selasphorus sasin (R.Lesson, 1829)",
 "Year 2011-2021"
 ]
}

 The dataset includes 720 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138611-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uk69p4
title: Occurrence Download

description: A dataset containing 96 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Clanis undulosa Moore, 1879",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 96 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130320-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10980547
title: Supplemental data for the publication: "Algal methylated compounds shorten the lag phase of Phaeobacter inhibens bacteria"

description: Data S1: P. inhibens feature table (genes) with results from co-cultivation RNA-sequencing run. The dataset includes bacterial gene accession numbers, functional annotations, transcript abundances (TPM normalized read counts) and results of DESeq2 differential gene expression analysis. (Fig. 1, figs. S1A, S3-S4, tables S1-S2). 

Data S2: P. inhibens feature table (genes) with results from lag phase RNA-sequencing run. The dataset includes bacterial gene accession numbers, functional annotations, transcript abundances (TPM normalized read counts) and results of DESeq2 differential gene expression analysis. (Fig. 4A, figs. S10-S13, tables S6-S7). 

Data S3: Emiliania huxleyi CCMP3266 sGenome gene annotation file version 2 (GFF3 format).

Data S4: Feature quantification obtained using Compound Discoverer. The table presents the output analysis using Compound Discoverer (v3.3) with a putative identification of metabolites. Each identified metabolite (each row) contains a sub-table under the + tab (on the left side) that specifies the feature quantification in each analyzed sample. Sample ID appears in the “Study File ID” column in each sub-table. Values in the columns “Exchange Rate [%]: 0” and “Exchange Rate [%]: 1” represent relative abundances of the molecules in their unlabeled form and with single 13C-label (M+1 isotopologue), respectively. Compounds marked with “1” in the “Tags” column were further validated using standards. The average M+1 isotope abundance [%] for S-Adenosylmethionine (SAM) and 5'-S-Methyl-5'-thioadenosine (MTA)—as reported in Fig. 4D—were calculated by averaging the values in the “Exchange Rate [%]: 1” column from samples supplemented with 13C-labeled and unlabeled DMSP, respectively. Detailed information regarding the isotope abundances of SAM and MTA can be found in the tab “SAM and MTA isotope abundance” in the table. In the tab “Features Positive Mode” samples F10, F12, F14, and F16 were supplemented with 13C-labeled DMSP and samples F2, F4, F6, F8 were supplemented with unlabeled DMSP. In the tab “Features Negative Mode” samples F2, F3, F4, and F5 were supplemented with 13C-labeled DMSP and samples F10, F11, F12, F13 were supplemented with unlabeled DMSP.
DOI: 10.15468/dl.tfa7mu
title: Occurrence Download

description: A dataset containing 7303 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brassica repanda (Willd.) DC."
 ]
}

 The dataset includes 7303 records from 154 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147982-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.83ayaf
title: Occurrence Download

description: A dataset containing 31008 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Plantae)",
 "Year is greater than or equal to 2012",
 "Year is less than or equal to 2022",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry MULTIPOLYGON (((113.9040280145431 22.41308358036764, 113.9361756710172 22.42985627070203, 113.953647223449 22.44662896103642, 113.9920846387985 22.48157206589957, 114.0130505017164 22.49764589413638, 114.0389083993153 22.51092427398481, 114.0766469525676 22.52769696431903, 114.1192775405005 22.53538444738888, 114.15771495585 22.55355486191797, 114.2094307510479 22.5563503103067, 114.244373855911 22.54796396513973, 114.2695328914125 22.53189013690258, 114.3009816857893 22.51441858447112, 114.3373225148472 22.50812882559563, 114.3631804124461 22.46829368605165, 114.3820496890721 22.44033920216077, 114.4002201036012 22.42077106343766, 114.3743622060023 22.40749268358957, 114.3869417237531 22.38932226906064, 114.3841462753641 22.37115185453172, 114.3610838261542 22.35717461258622, 114.3533963430843 22.33550988757133, 114.3254418591938 22.32782240450115, 114.3037771341784 22.34948712951655, 114.2988850994977 22.3613677851701, 114.2667374430233 22.3564757504891, 114.2660385809262 22.34110078434941, 114.2800158228714 22.32293036982048, 114.3093680309566 22.30475995529156, 114.3058737204703 22.28938498915187, 114.2995839615949 22.26282822945569, 114.2946919269142 22.25234529799644, 114.2590499599535 22.26632253994194, 114.2471693043002 22.25933391896922, 114.2506636147865 22.24605553912124, 114.2506636147865 22.21740219313364, 114.2457715801055 22.21390788264733, 114.2345897865493 22.22648740039767, 114.2136239236314 22.22648740039767, 114.1996466816862 22.22858398668978, 114.1758853703791 22.2348737455651, 114.1570160937529 22.24116350444029, 114.1353513687377 22.25583960848275, 114.1227718509869 22.27191343672001, 114.1556183695584 22.30126564480526, 114.1542206453637 22.32153264562578, 114.1346525066406 22.34110078434941, 114.1199764025978 22.3578734746838, 114.0948173670963 22.37185071662884, 114.0717549178866 22.37115185453172, 114.0493913307743 22.36276550936429, 114.0263288815645 22.35857233678087, 114.0018687081603 22.36695868194818, 113.9857948799231 22.38023706179627, 113.9704199137834 22.38512909647676, 113.9571415339353 22.37814047550449, 113.9473574645735 22.36905526824012, 113.9242950153638 22.36905526824012, 113.9103177734185 22.38652682067146, 113.9040280145431 22.41308358036764)))"
 ]
}

 The dataset includes 31008 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0169701-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j5b7jy
title: Occurrence Download

description: A dataset containing 147 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-83.33033 15.12089,-85.04583 15.97864,-86.02612 15.96639,-87.99894 15.81935,-89.04049 15.08413,-88.86894 14.22638,-87.1657 13.51568,-85.37668 14.22638,-85.02132 14.60624,-84.24935 14.66751,-83.33033 15.12089))",
 "TaxonKey is Agalychnis callidryas (Cope, 1862)"
 ]
}

 The dataset includes 147 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0148005-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j8vuma
title: Occurrence Download

description: A dataset containing 149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Kentrochrysalis sieversi Alphéraky, 1897",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 149 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130328-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3meyde
title: Occurrence Download

description: A dataset containing 8052 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elaeis guineensis Jacq."
 ]
}

 The dataset includes 8052 records from 271 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0272558-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ubfydy
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brassica hilarionis Post"
 ]
}

 The dataset includes 34 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147985-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hhdtw8
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Deilephila askoldensis Oberthür, 1879",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 36 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130321-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7nf827
title: Occurrence Download

description: A dataset containing 1319 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucalyptus tectifica F.Muell.",
 "HasGeospatialIssue is FALSE",
 "Year is 2000,2022",
 "HasCoordinate is TRUE",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 1319 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138612-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.39kzyk
title: Occurrence Download

description: A dataset containing 316 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brassica incana Ten."
 ]
}

 The dataset includes 316 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0147986-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gvn23u
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Kentrochrysalis streckeri Staudinger, 1880",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 27 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130329-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nfgbuv
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mongolia",
 "TaxonKey is Aconitum decipiens Vorosch. & Anfalov"
 ]
}

 The dataset includes 18 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0184398-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25999315
title: <b>Study of MicroRNA-192 as an Early Biomarker for Diagnosis of Diabetic Nephropathy</b>

description: <b>Study of MicroRNA-192 as an Early Biomarker for Diagnosis of Diabetic Nephropathy</b>
DOI: 10.15468/dl.qbabaf
title: Occurrence Download

description: A dataset containing 390 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Juniperus tibetica Kom.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 390 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0264722-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cd22z8
title: Occurrence Download

description: A dataset containing 104 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Truncatoguynia irregularis Cairns, 1989"
 ]
}

 The dataset includes 104 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138630-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2zep33
title: Occurrence Download

description: A dataset containing 5635 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Chimaphila umbellata (L.) W.P.C.Barton"
 ]
}

 The dataset includes 5635 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0148007-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pv57vs
title: Occurrence Download

description: A dataset containing 983 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhagastis mongoliana Butler",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 983 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0130351-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.