cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.15075195.v2
title: MICCAI 2018 – Computational Precision Medicine Challenge: 18F-FDG PET Radiomics Risk Stratifiers in Head and Neck Cancer

description: The Computational Precision Medicine (CPM) 2018 was held on September 16, in Granada (Spain), in conjunction with MICCAI 2018. As part of the CPM program, a series of imaging Grand Challenges were offered, hosted by kaggle. <br><br>This competition, "18F-FDG PET Radiomics Risk Stratifiers in Head and Neck Cancer", was organized as a Medical Image Computing and Computer Assisted Intervention (MICCAI) Computational Precision Medicine (CPM) grand challenge. Contestants weretasked to predict, using primary tumor 18F-FDG PET-derived radiomics features +/- matched clinical data, whether a tumor arising from the oropharynx will be controlled by definitive radiation treatment (RT). The head and neck radiation oncology team from University of Texas MD Anderson Cancer Center (MDACC) have curated and harmonized a multi-institutional dataset of 248 oropharynx cancer (OPC) patients, using our in-house 'LAMBDA-RAD' data management platform. Scans came from six different institutes from: the US (MDACC), Canada [four different clinical institutions in Québec: Hôpital Général Juif de Montréal (HGJ), Centre Hospitalier Universitaire de Sherbrooke (CHUS), Centre Hopitalier de l'Université de Montréal (CHUM) and Hôpital Maisonneuve-Rosemont de Montréal (HMR)], and Europe (MAASTRO Clinic, The Netherlands).<br><br>The challenge was open from June 15, 2018, 11:59 p.m. toAug. 30, 2018, midnight UT; this repository serves as FAIR (re)use durable repository for challenge data.<br>Details on the 2018 CPM Challenges can be found at: https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=37224869 <br><br>The "18F-FDG PET Radiomics Risk Stratifiers in Head and Neck Cancer" challenge website (archived) can be viewed at: https://web.archive.org/web/20190106050801/http://miccai.cloudapp.net/competitions/77and at: https://web.archive.org/web/20210418000112/https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=37224869<br>The kaggle-in-class host page for the challenge and results can be found at: https://www.kaggle.com/c/pet-radiomics-challenges.<br><br><br>
DOI: 10.6084/m9.figshare.6267284.v1
title: Rodriguez et al 2018

description: Raw data for publication
DOI: 10.17632/bbzpxhd22j
title: Action recognition and object detection dataset for firearm-related actions

description: Action recognition and object detection dataset for firearm-related actions.
The dataset is licensed under CC BY NC 3.0. However, we do allow commercial use, but only if prior permission is obtained.
DOI: 10.17632/c65sfrpt39
title: SPheno, a program for calculating supersymmetric spectra, SUSY particle decays and SUSY particle production at e + e − colliders

description: Abstract SPheno is a program that accurately calculates the supersymmetric particle spectrum within a high scale theory, such as minimal supergravity, gauge mediated supersymmetry breaking, anomaly mediated supersymmetry breaking, or string effective field theories. An interface exists for an easy implementation of other models. The program solves the renormalization group equations numerically to two-loop order with user-specified boundary conditions. The complete one-loop formulas for the masses are... Title of program: SPheno Catalogue Id: ADRV_v1_0 Nature of problem The first issue is the determination of the masses and couplings of supersymmetric particles in the R-parity conserved MSSM. Low energy data on Standard Model fermion masses, gauge couplings and electroweak gauge boson masses serve as constraints. Radiative corrections from supersymmetric particles to these inputs must be calculated. Theoretical constraints on the soft SUSY breaking parameters from a high scale theory are imposed and the parameters at the electroweak scale are obtained from the ... Versions of this program held in the CPC repository in Mendeley Data ADRV_v1_0; SPheno; 10.1016/S0010-4655(03)00222-4 ADRV_v2_0; SPheno; 10.1016/j.cpc.2012.05.021 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.6084/m9.figshare.13635302.v1
title: Data_upload_2021.1.25.sav

description: The present study aimed to examine how an employee’s vocational delay of gratification (VDG) behavior leads to her/his spouse's failed work engagement. Drawing upon the perspectives of resource depletion and the role theory, we proposed that employees' limited resources are taken up by VDG and thus less devoted to family roles, resulting in more work-family conflict, which in turn translates into a spousal stressor of ego-depletion that makes it difficult for spouses to engage in their own work. Results of a multi-source, time-lagged data with 377 full-time dual-earner couples supported this spillover-crossover-spillover 4-stage mediation model. The results of this study extend the delay of gratification and ego-depletion research literature and indicate the importance of considering the potential cost of employees’ career decisions to spouses.
DOI: 10.6084/m9.figshare.14489694.v1
title: Suppl_Data_3.TPS.ML.nwk

description: Dataset S3. The ML tree of the TPs gene in newick format (in Hara et at., 2021)
DOI: 10.6084/m9.figshare.3549687.v1
title: Appendix C. Table showing the species responses to environmental covariates.

description: Table showing the species responses to environmental covariates.
DOI: 10.6084/m9.figshare.7976141.v1
title: Supplementary Data 1 - ANOVAresults

description: Pan-cancer/cancer-type-specific ANOVA results associating gene fitness-effects to cancer driver-events and microsatellite instability. ANOVA p-values refer to ANOVA tests, T p-values refer to two-sided Student’s t-tests. False discovery rates were calculated within each analysis by collectively correcting p-values with the Storey-Tibshirani method.
DOI: 10.17632/zv6dynwc2p
title: Supplementary data and files to "Industrial Structure and Urban Accounting"

description: Data and files for replication of the results shown in "Industrial Structure and Urban Accounting" Readme.txt explains the contents of files.
DOI: 10.17632/pfbdxsfvgt
title: Open-source syringe extrusion head for shear-thinning materials 3D printing

description: This dataset is linked to the Rapid Prototyping Journal article (https://doi.org/10.1108/RPJ-09-2021-0245). 

Abstract
Purpose: This article reports the development of an open-source syringe extrusion head for shear-thinning materials, aiming to adapt open-source 3D printers to be helpful in research lines that use gels, hydrogels, pastes, inks, and bio-inks.
Design/methodology/approach: This hardware was designed to be compatible with a Graber i3-based 3D printer; nevertheless, it can be easily adapted to other open-source 3D printers.
Findings: The extrusion head successfully deposits the material during the 3D printing process. It was validated fabricating geometries that include scaffold structures, which are a possible application of bioprinting for tissue engineering. As reported, the extruded filaments allowed the porous samples' structuration.
Practical implications: This system expands the applications of open-source 3D printers used at the laboratory scale. It enables low-cost access to research areas such as tissue engineering and biofabrication, energy storage devices, and food 3D printing.
Originality: The open-source hardware here reported is of simple fabrication, assembly, and installation. It uses a Cardan coupling and a three guides system to transfer the stepper motor motion. This approach allows continuous movement transfer to the syringe piston, producing an adequate deposition or retraction. Thus, the effect of misalignments is avoided, considering that these latter can cause skipping steps in the motor, directly affecting the deposition.
DOI: 10.6084/m9.figshare.14910399.v2
title: Global_syndromes_induced_by_changes_in_solutes_of_the_world’s_large_rivers_600stations&info.zip

description: Nature Communications, 2021, DOI: <b>10.1038/s41467-021-26231-w: </b>Data on solutes concentrations (<i>C</i>), annual runoff (<i>Q</i>), co-varying trend in <i>Q</i> and <i>C</i>, and the corresponding solute-induced river syndrome at 600 stations in 149 large rivers
DOI: 10.6084/m9.figshare.19951928.v1
title: independent comparison

description: Data for global GPP comparisons, global change in GPP in response to increased CO2 comparisions, and turnover times.
DOI: 10.6084/m9.figshare.20131052.v1
title: Synergistic effects of soil nutrient level and native species identity and diversity on biotic resistance to Sicyos angulatus, an invasive species

description: This dataset was shared by authors of a research paper to be published in Oecologia
DOI: 10.6084/m9.figshare.27991574.v1
title: EPI-Clone dataset X.1 : Targeted DNAm+DNA+RNA-seq from CD34+ BM cells of a healthy donor

description: This is dataset supports parts of the EPI-Clone manuscript. Here, targeted single cell methylation profiling (scTAMseq) was combined with targeted RNA-seq from the same cells (SDR-seq) to profile CD34+ cells from bone marrow of a healthy 51-year old male individual.Dataset is a seurat (v5) object with the following assays, reductions and metadata:<br><b>ASSAYS:</b><br>RNA: RNA expression data for 120 target genesDNAm: DNA methylation data, containing binary observations (0: amplicon not observed, i.e. dropout or absence of DNA methylation, 1: amplicon observed, i.e. DNA methylation). See the paper on scTAMseq<b>DIMENSIONALITY REDUCTION</b>pca, dynapca: PCA performed on all methylome data, or on consensus dynamic CpGs onlyumap, dynaumap: UMAP computed on all methylome data, or on consensus dynamic CpGs onlyprojected: Methylome data projected on the reference CD34+ UMAP coordinate (add DOI!)rnapca: PCA performed on RNA datarnaumap: PCA performed on RNA dataFor strategies how to obtain dimensionality reduction that reflect clonal identity, please see the github page accompanying the manuscript.<b>METADATA</b>nFeature_RNA, nFeature_DNAm, nFeature_NonHhaI: Number of RNA , DNAm and genotypoing amplicons observedprojected.cluster: Cell type, according to DNA methylation based projection on the CD34+ referenceCellType_rna: Cell type annotation according to RNA expressionCountsChrY: Y chromosome read counts
DOI: 10.6084/m9.figshare.c.3625802_d3.v1
title: MOESM6 of Profiling and bioinformatics analyses reveal differential circular RNA expression in radioresistant esophageal cancer cells

description: Additional file 6: Table S6. circRNA_miRNA_target gene.pathways.
DOI: 10.17632/wwsxxbgxtw
title: The Effects of Industry 4.0 Technologies on Relational Performance: the Mediating Role of Supply Chain Emergence in the Transitive Logistics Service Triads

description: The enclosed *.csv file contains the data collected for the analysis presented in the manuscript "The Effects of Industry 4.0 Technologies on Relational Performance: the Mediating Role of Supply Chain Emergence in the Transitive Logistics Service Triads" submitted to Supply Chain Management: an International Journal.
DOI: 10.6084/m9.figshare.17097035.v1
title: MSA of Entodon, Hypnum and other 15 green plants

description: MSA of Entodon, Hypnum and other 15 green plants
DOI: 10.17632/dk2h3vhnnx
title: Dataset Containing Frame Images of Indian Candidates during Interview for Confidence Level Estimation

description: The dataset contains a set of 4754 images of Indian candidates during interviews, which can be used for various machine learning and computer vision applications, such as face recognition, emotion detection, eye moment, face direction, and gender recognition. The dataset contains more than 170 images of each Indian candidate during interviews, captured in various settings, including indoor and outdoor locations, with different lighting conditions and backgrounds. Each image is in JPEG format. Furthermore, each candidate is denoted by his/her id number, in total there are 21 candidates with their labeled confidence (1)/ unconfidence(0). The dataset is labeled considering various features of the candidates, such as face direction, facial expression, and eye moment. These labels can be used for supervised learning tasks, such as classification or regression. The dataset is diverse in terms of the gender and age of the candidates, making it suitable for training machine learning models.
DOI: 10.17632/9j72p9yswp
title: Data for: Toward a holistic view on Lean sustainable construction: a literature review

description: Systematic literature review on Lean sustainable construction
DOI: 10.17632/hpht5tv5xz
title: HK2 lipidomics INFg

description: HK2 cells were transfected with siRNA targeting ACSL5 and scrambled, for 24 h than incubated for additionnal 48 hours.
DOI: 10.6084/m9.figshare.23931204.v1
title: Androdex_Images

description: AndroDex: Android Dex Images of Obfuscated MalwareThe AndroDex dataset is provided in binary as well as image format so it can be easily used in any data processing software. The images and binaries can be easily opened and processed using Notepad, R, python, WEKA, or any other software whereas .txt files can be used and opened in any format. These files can be easily converted into .csv format to ready by Python, R, WEKA, etc. All the files are password protected and the password is "androdex".Cite this using Scientific Data https://www.nature.com/sdata/
DOI: 10.6084/m9.figshare.28923878.v1
title: Human hematopoiesis dataset from Dynamo and associated preprocessing models and intermediate data objects

description: Human hematopoiesis dataset from Dynamo and associated preprocessing models and intermediate data objects
DOI: 10.6084/m9.figshare.29128853.v1
title: The Greatness of an Authentic Leader

description: The Greatness of an Authentic Leader: Removing the Mask provides managers with practical strategies to develop self-awareness, integrity, empathy, focus, humor, and service, demonstrating that authenticity fosters trust, engagement, and ethical cultures. Drawing on personal stories, interviews, and research, it introduces a six-step roadmap to counter “fake” leadership and build transparent organizations. El Jallad’s original insights show significant social impact: enhanced team resilience, employee well-being, and sustainable organizational performance through inclusive, human-centered practices.
DOI: 10.17632/rzzd7nz8vv
title: Survey results for Third Party Risk Management Tool Selection Criteria

description: The research data utilized in this study primarily consists of responses from a survey administered to information security and risk management professionals globally. The survey was designed to elicit the relative importance of various criteria when selecting a Third-Party Risk Management (TPRM) tool. The survey employed a weighted scale, allowing respondents to assign a level of importance (e.g., not important, somewhat important, very important) to each of the criteria identified in the applied framework.

The survey sample encompassed a diverse range of roles and levels of seniority within organizations, including CEOs, VPs, auditors, and managers. This diversity aimed to capture a comprehensive view of the priorities and preferences across the industry.

The collected survey data was then analyzed using descriptive statistics and a weighted average approach to determine the mean and median scores for each evaluation criterion. This analysis allowed for a quantitative assessment of the relative importance of different features and functionalities in TPRM tools, providing valuable insights into the decision-making process of industry professionals.

Additionally, the study incorporated a review of existing literature on TPRM and tool selection. This literature review served to identify key concepts, trends, and gaps in knowledge, informing the development of the TPRMTSF framework and the selection of survey criteria.

The combination of survey data and literature review provides a comprehensive foundation for the research findings and recommendations presented in this study. By analyzing both empirical data and existing knowledge, the study offers a well-rounded perspective on the challenges and opportunities associated with TPRM tool selection.
DOI: 10.6084/m9.figshare.19635603.v5
title: Net primary productivity: Above- and below-ground NPP of two grassland types in Qinghai-Tibet Plateau

description: net primary productivity data: Qinghai-Tibet Plateau. The dataset contains NPP of two grassland types in the Qinghai-Tibet Plateau.
DOI: 10.6084/m9.figshare.2007537.v2
title: A spatial phase transition between neutral and niche communities: R code and model output

description: R source code for the determination of critical points in the phase transition, the analysis of richness and Shannon diversity of the model, early warnings and the application to Barro Colorado Island fores plot (BCI) . <br><br>The neutral-niche model C++ program is available at: <br>https://dx.doi.org/10.6084/m9.figshare.969692<br><br><br><b>R Markdown files:</b><br>I usually run Rmd files chunk by chunk because there are long simulations, and save ".RData" to keep the results. Neutral_steadyState.Rmd: Simulations to determine the time to reach steady state<br>Neutral_simulCT.Rmd: Simulations to find critical values, and plots H vs Rho vs Migration<br>Neutral_EarlyWarnings_Smax.Rmd: Early warnings of the critical transition based on Maximun Patch <br>BCIpatchAnalysis.Rmd: Barro Colorado Island analysis you have to obtain the BCI data from http://ctfs.si.edu/webatlas/datasets/bci/Terms%20and%20conditions.htm<br><b>R Files</b><br>Neutral_fun.r: functions used for the analysis and simulations<br>BCI_fun.r: functions used for the analysis of BCI data<br><i>powerlaw.zip: code to fit powerlaws from http://tuvalu.santafe.edu/~aaronc/powerlaws/ (by Cosma Shalizi)</i><i><br></i><i><b>Data files</b></i><i><br>.RData</i> are the results of simulations in data.frame format<br><i><br></i><i>Simul.zip</i> Output of all simulations.<br><br> <br>
DOI: 10.6084/m9.figshare.24119691.v1
title: RACS_Quantification

description: NMR spectral characterization of a rosin sample from <i>Pinus pinaster</i> and <i>Pinus Pinea</i>. Samples are listed by region, from 1 to 8 and within each region there are different samplings (<i>e.g.</i> P1_1 means region one and first sampling). In each sample, exist 1 folder containing the <sup>1</sup>H spectrum.
DOI: 10.6084/m9.figshare.24166077.v1
title: fileset for GKP qubit synthesizer

description: This file contains the data used in the paper, "Gottesman-Kitaev-Preskill qubit synthesizer for propagating light".
DOI: 10.6084/m9.figshare.24532924.v1
title: Genome assembly and annotation of <i>Sorghum bicolor</i> CHBZ

description: all.gff.gz: repeat annotationCHBZGL.gff3.gz: gene structure annotation<br>
DOI: 10.17632/7pwy926rxx
title: বাংলা সাহিত্যে কাজী নজরুল ইসলামের ইসলামী ঐতিহ্যের প্রতিনিধিত্বের অনুসন্ধান: একটি সমালোচনামূলক বিশ্লেষণ

description: সার সংক্ষেপ: 
উপমহাদেশে উপনিবেশবাদের এক চরম সংকটময় অবস্থার মাঝে কাজী নজরুল ইসলামের আবির্ভাব ঘটে বাংলা সাহিত্যে। কাজী নজরুল ইসলাম বিশ ও ত্রিশের দশকে উপমহাদেশের অবিভক্ত বাংলার সাহিত্যাঙ্গনে এক ব্যতিক্রমধর্মী ব্যক্তিত্ব ছিলেন। সাহিত্য রচনার নানা মুখিতায় মুসলমানদের ধর্মীয় ঐতিহ্যও নজরুল রচনার একটি অন্যতম অধ্যায়। মুসলিম ঐতিহ্যের নানা দিক নিয়ে নজরুল লিখেছেন। নজরুল তাঁর কবিতা, গান ও সাহিত্যের অন্যান্য শাখার ভেতর মুসলমানদের ইতিহাস ও ঐঐতিহ্য তুলে ধরেছেন। হযরত মুহাম্মদ সা.-এর জীবনী, মুসলমানদের পবিত্র ধর্মগ্রন্থ কুরআন শরীফসহ ইসলামের নানা ইতিহাস নিয়ে লিখেছেন। প্রায় দুই সহস্রাধিক গান রয়েছে নজরুলের। যেখানে স্থান পেয়েছে ইসলাম ধর্মের আরো নানা বিষয়। যেমন- নামাজ, রোজা, ঈদ, হজ, জাকাত, হযরত মুহাম্মদ সা.-এর মাতা, পিতা, স্ত্রীসহ বিভিন্ন নবি, রাসুল এবং মুসলিম জাহানের উল্লেখযোগ্য ব্যক্তিবর্গ। কাব্য আমপারার মধ্যে দিয়ে পবিত্র কুরআন শরীফের বঙ্গানুবাদ করতে চেয়েছিলেন নজরুল। হযরত মুহাম্মদ সা.-এর জীবনী প্রকাশ করতে চেয়েছিলেন মরুভাস্কর কাব্যের মধ্যে দিয়ে। "মুসলিম ঐতিহ্য ও নজরুল সাহিত্য" শীর্ষক আলোচ্য প্রবন্ধটিতে এই বিষয়গুলো আলোচনা-পর্যালোচনা করার প্রয়াস রয়েছে।
মূল শব্দসমূহ: সাহিত্য, নজরুল, মুসলিম ঐতিহ্য, ধর্ম এবং ইসলাম।
"ইসলাম বলে, সকলের তরে মোরা সবাই সুখ-দুখ সম-ভাগ করে নেব সকলে ভাই, নাই অধিকার সঞ্চয়ের!"
DOI: 10.17632/zsy5kr88jn
title: Time-Dependent Outcomes of Computed Tomography Angiography after Clinically Apparent Brain Death: A Retrospective Cohort Study

description: Aim of our study was to verify the impact of the time interval between appearance of BBA and CTA testing on the sensitivity of CTA applied for the confirmation of CCA during DNC determination procedures. 
Material and methods: We recruited 118 ICU patients who underwent DNC determination including CTA. CTA data were acquired using two different techniques: conventional two-phase or timing-invariant CTA. To ascertain CCA during CTA, a 4-point scoring system introduced by the French Society of Neuroradiology was applied. According to time from BBA to CTA patients were divided in following groups: &lt;6 h, 6-12 h, 12-18 h, 18-24 h, 24-48 h, 48-72 h, 72-96 h and &gt;96 h. 
Results: CTA was negative (non-confirmatory of CCA) in 15 out of 118 patients which yielded an overall sensitivity of 87.3% (95% CI: 78.6-91.1). Analysis of false-negative CTA results by timing after BBA indicated that 93% (14/15) of false negatives occurred within 12 hours. Based on these findings, a threshold of 12 hours emerged, dividing the study population into early (up to 12 hours; sensitivity of 61.1%) and late (&gt;12 hours; sensitivity of 98.7%; p&lt;0.001) groups for CTA performance after BBA. 
Conclusions: In summary, this is the first publication directly illustrating relationship between time elapse after appearance of BBA and CTA sensitivity used for confirmation of CCA during DNC diagnostic procedures. We conclude that time elapse over 12 h after BBA appearance with sensitivity of 98,7% seems to be optimal for CTA testing and range between 6-12 h is still acceptable despite of lower sensitivity of 69,4%.
DOI: 10.6084/m9.figshare.21620781.v1
title: ProcB_Bull et al 2022_GE in Salmonids_Main text_Revisions2_SupMaterial.xlsx from Environment and genotype predict the genomic nature of domestication of salmonids as revealed by gene expression

description: Supplementary Tables S1-S6
DOI: 10.6084/m9.figshare.4483724.v1
title: From single video sequence - Observations of L1 (SAD, SATD) and L2 (SSE) vs Structural Similarity (SSIM) for Intra and Inter coded frames

description: Observations of L1 (Sum of Absolute Difference (SAD), Sum of Absolute Transform Difference (SATD)) and L2 (Sum of Squared Errors (SSE)) against Structural Similarity (SSIM) at sub-block (4x4) and (8x8) on H.264/AVC. This taken during Intra and Inter coding. Limited to a single video, Foreman, see paper. <br> Please note the following when dataset is unzipped: SAD and SSE is marked out on the folder name, however SATD is marked as PsuedoSSIM. The observations are recorded within file that have an extension/end with .dat (dot dat). <br> Codebook: Below are the headings and an overall description. BlockSize SSIM OneMinSSIM1k Covariance AbsMeanDiff PseudoSSIM TradDist Only the first two columns and the last column were used for the paper referenced. BlockSize – this will be 4 for 4x4, 8 for 8x8. SSIM – SSIM score as calculated using the implementation found within JM H.264/AVC. TradDist – This would refer to L1 or L2 norm of SA(T)D or SSE respectively. <br>OneMinSSIM1k, Covariance, AbsMeanDiff and PseudoSSIM refer to the development of the PsuedoSSIM score, a model to map traditional distortion metric assessment to SSIM values. This is concept is explained in: http://dx.doi.org/10.1109/BMSB.2013.6621695