cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4925663
title: Dataset: Zr EBSD maps rotated at 0, 50 & 90 degrees

description: Dataset: Rotated Zr EBSD maps Ruth Birch (1),Ben Britton (1,2)<br> 1. Department of Materials, Imperial College London<br> 2. Now also, Department of Materials Engineering, University of British Columbia For more information please contact: ruth.birch07@imperial.ac.uk<br> _ _ _ Small EBSD maps of the same area, rotated by 0 deg, 50 deg and 90 deg. Sample: fine grain Zircaloy-4 EBSD settings:<br> - Magnification: 1500x<br> - Step size: 1 um<br> - EBSP resolution: 160x120<br> - Map size:285.4um x 187.2um <br> - Map resolution: 285 x 191 pixels<br> _ _ _<br> Data provided: h5 files (with and without patterns):<br> - 0 deg rotation:<br> FG1_WD18_DD17_285px_1500x_rotation0_pat.h5<br> FG1_WD18_DD17_285px_1500x_rotation0_nopat.h5<br> - 50 deg rotation:<br> FG1_WD18_DD17_285px_1500x_rotation50_pat.h5<br> FG1_WD18_DD17_285px_1500x_rotation50_nopat.h5<br> - 90 deg rotation:<br> FG1_WD18_DD17_285px_1500x_rotation90_pat.h5<br> FG1_WD18_DD17_285px_1500x_rotation90_nopat.h5 SEI images:<br> - 0 deg:FG1_zero_rotation_SEI_1500x.tif<br> - 50 deg:FG1_50deg_rotation_SEI_1500x_EBSD.tif<br> - 90 deg:FG1_90deg_rotation_SEI_1500x_EBSD.tif PPT:<br> - data summary showing overlapping area: DataDescription.pptx Addition image:<br> - chamber view:FG1_zero_rotation_chamber.tif
DOI: 10.5281/zenodo.4925662
title: Dataset: Zr EBSD maps rotated at 0, 50 & 90 degrees

description: Dataset: Rotated Zr EBSD maps Ruth Birch (1),Ben Britton (1,2)<br> 1. Department of Materials, Imperial College London<br> 2. Now also, Department of Materials Engineering, University of British Columbia For more information please contact: ruth.birch07@imperial.ac.uk<br> _ _ _ Small EBSD maps of the same area, rotated by 0 deg, 50 deg and 90 deg. Sample: fine grain Zircaloy-4 EBSD settings:<br> - Magnification: 1500x<br> - Step size: 1 um<br> - EBSP resolution: 160x120<br> - Map size:285.4um x 187.2um <br> - Map resolution: 285 x 191 pixels<br> _ _ _<br> Data provided: h5 files (with and without patterns):<br> - 0 deg rotation:<br> FG1_WD18_DD17_285px_1500x_rotation0_pat.h5<br> FG1_WD18_DD17_285px_1500x_rotation0_nopat.h5<br> - 50 deg rotation:<br> FG1_WD18_DD17_285px_1500x_rotation50_pat.h5<br> FG1_WD18_DD17_285px_1500x_rotation50_nopat.h5<br> - 90 deg rotation:<br> FG1_WD18_DD17_285px_1500x_rotation90_pat.h5<br> FG1_WD18_DD17_285px_1500x_rotation90_nopat.h5 SEI images:<br> - 0 deg:FG1_zero_rotation_SEI_1500x.tif<br> - 50 deg:FG1_50deg_rotation_SEI_1500x_EBSD.tif<br> - 90 deg:FG1_90deg_rotation_SEI_1500x_EBSD.tif PPT:<br> - data summary showing overlapping area: DataDescription.pptx Addition image:<br> - chamber view:FG1_zero_rotation_chamber.tif
DOI: 10.6084/m9.figshare.14769000
title: [Raw Data] An Investigation on the Availability of Contribution Information in Open-Source Projects

description: This is the dataset adopted for the paper<br>Zheying Zhang, Outi-Sievi Korte, Ulla-Tarvikki Virta, Hannu-Marri Jarvinen, Davide Taibi. An Investigation on the Availability of Contribution Information in Open-Source Projects. Euromicro/SEAA 2021.<br><br>
DOI: 10.6084/m9.figshare.14769000.v2
title: [Raw Data] An Investigation on the Availability of Contribution Information in Open-Source Projects

description: This is the dataset adopted for the paper<br>Zheying Zhang, Outi-Sievi Korte, Ulla-Tarvikki Virta, Hannu-Marri Jarvinen, Davide Taibi. An Investigation on the Availability of Contribution Information in Open-Source Projects. Euromicro/SEAA 2021.<br><br>
DOI: 10.6084/m9.figshare.14769000.v1
title: [Raw Data] An Investigation on the Availability of Contribution Information in Open-Source Projects

description: This is the dataset adopted for the paper<br>Zheyng Zhang, Outi-Sievi Korte, Ulla-Tarvikki Virta, Hannu-Marri Jarvinen, Davide Taibi. An Investigation on the Availability of Contribution Information in Open-Source Projects. Euromicro/SEAA 2021.<br><br>
DOI: 10.5281/zenodo.4925742
title: Research Artifact: Test-Case Prioritization for Configuration Testing

description: This is the artifact of the research paper, "Test-Case Prioritization for Configuration Testing", at the ACM SIGSOFT International Symposium on Software Testing and Analysis (ISSTA), 2021. It is also available on Github: https://github.com/xlab-uiuc/ctest_prio_art To use the artifact, please first download and decompress ctest_prio_art-main.zip. Then refer to README.md for using our data, reproducing our experiment results, and running new experiments.
DOI: 10.5281/zenodo.4728985
title: Research Artifact: Test-Case Prioritization for Configuration Testing

description: This is the artifact of the research paper, "Test-Case Prioritization for Configuration Testing", at the ACM SIGSOFT International Symposium on Software Testing and Analysis (ISSTA), 2021. It is also available on Github: https://github.com/xlab-uiuc/ctest_prio_art To use the artifact, please first download and decompress ctest_prio_art-main.zip. Then refer to README.md for using our data, reproducing our experiment results, and running new experiments.
DOI: 10.5281/zenodo.4925730
title: Data for "Measurement report: Molecular composition and volatility of gaseous organic compounds in a boreal forest – from volatile organic compounds to highly oxygenated organic molecules"

description: This file consists of the time series of the measured trace gases, meteorological parameters, and the concentrations of terpenes (isoprene, monoterpenes, sesquiterpenes, and diterpenes measured by Vocus) as well as total organics (measured by MION-Br, MION-NO3, Vocus, and ACSM) at the SMEAR II station, which have been analyzed in the manuscript "Measurement report: Molecular composition and volatility of gaseous organic compounds in a boreal forest – from volatile organic compounds to highly oxygenated organic molecules". For more details, please contact the author (wei.huang@helsinki.fi).
DOI: 10.5281/zenodo.4925729
title: Data for "Measurement report: Molecular composition and volatility of gaseous organic compounds in a boreal forest – from volatile organic compounds to highly oxygenated organic molecules"

description: This file consists of the time series of the measured trace gases, meteorological parameters, and the concentrations of terpenes (isoprene, monoterpenes, sesquiterpenes, and diterpenes measured by Vocus) as well as total organics (measured by MION-Br, MION-NO3, Vocus, and ACSM) at the SMEAR II station, which have been analyzed in the manuscript "Measurement report: Molecular composition and volatility of gaseous organic compounds in a boreal forest – from volatile organic compounds to highly oxygenated organic molecules". For more details, please contact the author (wei.huang@helsinki.fi).
DOI: 10.18112/openneuro.ds003685.v1.0.0
title: A Test-retest Resting and Cognitive State EEG Dataset
DOI: 10.34740/kaggle/dsv/2323254
title: Goodreads Choice Awards 2011-2020
DOI: 10.48366/r112387
title: Overview of Approaches that Classify User Feedback as Feature Request

description: This overview shows the classification results of approaches that use the machine learning algorithms Naïve Bayes, Support Vector Machines, and Decision Trees C4.5 in combination with the machine learning features Bag of Words or Term Frequency - Inverse Document Frequency to classify user feedback as feature request.
DOI: 10.3886/e142701
title: ATUS College Student Time Poverty

description: This project explored how much time student parents had for college, using the American Time Use Survey (ATUS).
DOI: 10.3886/e142701v1
title: ATUS College Student Time Poverty

description: This project explored how much time student parents had for college, using the American Time Use Survey (ATUS).
DOI: 10.5281/zenodo.4288672
title: Cluster configurations of the Hegselmann-Krause model on network ensembles

description: This is the raw data underlying the results of the preprint [arxiv:2102.10910](https://arxiv.org/abs/2102.10910). ## Data For each measured combination of the confidence and system size, there is one gzipped<br> file. For different ensembles, we collected data in different ranges and quality.<br> The paramters are: * Number of samples `m` per parameter combination<br> * Range `r` of confidences epsilon<br> * Distances `d` between values of epsilon (basically the resolution of the data)<br> * Largest size `N_max` The single files follow a naming scheme of `n{N}_e{epsilon}.cluster.dat.gz`, where<br> `{N}` signals the system size of the simulation and `{epsilon}` is the confidence<br> value of the simulation (without a decimal point, i.e., `0050` corresponds to `epsilon = 0.050`).<br> The sizes `N` are usually powers of two (or for the lattices, perfect squares close to powers of two). We present the data for each ensemble in one archive. <br> * Fully connected `full.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.001`, `N_max = 262144`<br> * Barabasi Albert with a mean degree of 4 `BA4.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.002`, `N_max = 32768`<br> * Barabasi Albert with a mean degree of 10 `BA10.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.001`, `N_max = 65536`<br> * Square lattice with first nearest neighbors `lat1.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.001`, `N_max = 16384`<br> * Square lattice with second nearest neighbors `lat2.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.001`, `N_max = 16384`<br> * Square lattice with third nearest neighbors `lat3.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.001`, `N_max = 65536`<br> * Square lattice with fourth nearest neighbors `lat4.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.001`, `N_max = 65536`<br> * Square lattice with third nearest neighbors and 1% rewired edges `lat3_ws.tar`<br> * `m = 1000`, `r = [0.0, 0.3]`, `d = 0.001`, `N_max = 16384`<br> * connected Erdos Renyi with mean degree of 10 `ER10.tar`<br> * `m = 1000`, `r = [0.0, 0.3]`, `d = 0.002`, `N_max = 32768` ## Data format Each final state is encoded as three lines: * The convergence time is a single integer with a line prefix '# sweeps: '<br> * The positions of all clusters in opinion space with a line prefix '# ' (unsorted)<br> * The number of agents in each of the clusters without a line prefix ## Python example for reading the format An example script, which visualizes the S vs eps graph for the largest size of the fully connected<br> case, with a function to read this format is given in `example.py`.
DOI: 10.5281/zenodo.4288671
title: Cluster configurations of the Hegselmann-Krause model on network ensembles

description: This is the raw data underlying the results of the preprint [arxiv:2102.10910](https://arxiv.org/abs/2102.10910). ## Data For each measured combination of the confidence and system size, there is one gzipped<br> file. For different ensembles, we collected data in different ranges and quality.<br> The paramters are: * Number of samples `m` per parameter combination<br> * Range `r` of confidences epsilon<br> * Distances `d` between values of epsilon (basically the resolution of the data)<br> * Largest size `N_max` The single files follow a naming scheme of `n{N}_e{epsilon}.cluster.dat.gz`, where<br> `{N}` signals the system size of the simulation and `{epsilon}` is the confidence<br> value of the simulation (without a decimal point, i.e., `0050` corresponds to `epsilon = 0.050`).<br> The sizes `N` are usually powers of two (or for the lattices, perfect squares close to powers of two). We present the data for each ensemble in one archive. <br> * Fully connected `full.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.001`, `N_max = 262144`<br> * Barabasi Albert with a mean degree of 4 `BA4.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.002`, `N_max = 32768`<br> * Barabasi Albert with a mean degree of 10 `BA10.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.001`, `N_max = 65536`<br> * Square lattice with first nearest neighbors `lat1.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.001`, `N_max = 16384`<br> * Square lattice with second nearest neighbors `lat2.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.001`, `N_max = 16384`<br> * Square lattice with third nearest neighbors `lat3.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.001`, `N_max = 65536`<br> * Square lattice with fourth nearest neighbors `lat4.tar`<br> * `m = 1000`, `r = [0.0, 0.6]`, `d = 0.001`, `N_max = 65536`<br> * Square lattice with third nearest neighbors and 1% rewired edges `lat3_ws.tar`<br> * `m = 1000`, `r = [0.0, 0.3]`, `d = 0.001`, `N_max = 16384`<br> * connected Erdos Renyi with mean degree of 10 `ER10.tar`<br> * `m = 1000`, `r = [0.0, 0.3]`, `d = 0.002`, `N_max = 32768` ## Data format Each final state is encoded as three lines: * The convergence time is a single integer with a line prefix '# sweeps: '<br> * The positions of all clusters in opinion space with a line prefix '# ' (unsorted)<br> * The number of agents in each of the clusters without a line prefix ## Python example for reading the format An example script, which visualizes the S vs eps graph for the largest size of the fully connected<br> case, with a function to read this format is given in `example.py`.
DOI: 10.48366/r111154
title: Linked Data Publishing using Scholarly Ontologies

description: Linked Data Publishing using Scholarly Ontologies
DOI: 10.48366/r111151
title: Gender structure of the parliamentary elites in three countries

description: Gender (men/women) structure of the parliamentary elites in N. Macedonia, Croatia, and the Czech Republic
DOI: 10.48366/r111117
title: Optimal composition of non wheat flours in composite bread

description: Composite bread seeks to replace part of the wheat flour with non-wheat flours in bread making. This is important for countries that do not produce wheat to produce comparable quality products while reducing dependence on imported wheat. This has become even so important in the face of Covid-19 restrictions which closed borders and disrupted international supply chains. However, finding suitable replacements for wheat flour has proven to be difficult. Thus, the need for research to identify suitable replacements of wheat flour, as well as optimal processing conditions.
DOI: 10.48366/r110777
title: Transboundary Cooperation in context of Water Food Energy Nexus

description: This comparison compares 3 different studies including review and analysis to identify importance of Water Food Energy Nexus perepctive within transboundary cooperation in river basins.
DOI: 10.48366/r110991
title: Comparison of Antiviral compounds from Natural Sources

description: Detailed description of this comparison
DOI: 10.48366/r110655
title: Expression of monocytic human leukocyte antigen receptor in the critically ill

description: Critically ill patients with sepsis may suffer from acquired immunosuppression thus possibly worsening outcomes. Sepsis is defined as a life threatening dys-regulated host immune response to various pathogens. Expression of monocytic human leukocyte antigen receptor has recently been proposed as a promising marker of immune function allowing for quantification of immunosuppression and risk of secondary infections. This interaction has also been studied in patients suffering from COVID-19. Injection of interferon gamma has been discussed as a possible therapy in order to restore immune function. Here we compare several studies regarding expression of monocytic human leukocyte antigen receptor in patients suffering from immunosuppression.
DOI: 10.48366/r110651
title: Housing and mental health of people in informal area of Ibadan North Local Government, Nigeria

description: Influence of housing on human health
DOI: 10.48366/r110361
title: Pilot mini collection of studies on libraries as third places.

description: This set of publications discusses a range of different aspects of libraries as third places (places where people socialise and enjoy). It illustrates the substantial differences in research designs in this domain. The set is published under Place and environment (there is no category for Librarianship at the moment of the experimentation. The collection will be cleaned and expanded in the future.
DOI: 10.48366/r110245
title: Constitution-Making Process

description: Constitution-Making Process and Results in Turkey- South Africa and Kenya
DOI: 10.48366/r110188
title: Constitution-Making Process

description: Constitution-Making Process and Results in Turkey- South Africa and Kenya
DOI: 10.48366/r110138
title: Techno-economic analyses of microgrid and hybrid energy systems

description: Comparison of studies performed using resource data on optimal planning and sizing of microgrid and hybrid energy systems
DOI: 10.48366/r110124
title: Soft Robotics gloves for rehabilitation for stroke impaired hand

description: Stroke is the one of the main factor for hand impairment around the world. Soft robotic gloves are being used for rehabilitation purposes due to their safe human-machine interaction.
DOI: 10.6084/m9.figshare.14769120
title: Supplementary Material for: The Epipeptide Biosynthesis Locus <b><i>epeXEPAB</i></b> Is Widely Distributed in <b><i>Firmicutes</i></b> and Triggers Intrinsic Cell Envelope Stress

description: The <i>epeXEPAB</i> (formerly <i>yydFGHIJ</i>) locus of <i>Bacillus subtilis</i> encodes a minimalistic biosynthetic pathway for a linear antimicrobial epipeptide, EpeX, which is ribosomally produced and post-translationally processed by the action of the radical-SAM epimerase, EpeE, and a membrane-anchored signal 2 peptide peptidase, EpeP. The ABC transporter EpeAB provides intrinsic immunity against self-produced EpeX, without conferring resistance against extrinsically added EpeX. EpeX specifically targets, and severely perturbs the integrity of the cytoplasmic membrane, which leads to the induction of the Lia-dependent envelope stress response. Here, we provide new insights into the distribution, expression, and regulation of the minimalistic <i>epeXEPAB</i> locus of <i>B. subtilis</i>, as well as the biosynthesis and biological efficiency of the produced epipeptide EpeX*. A comprehensive comparative genomics study demonstrates that the <i>epe</i>-locus is restricted to but widely distributed within the phylum <i>Firmicutes</i>. The gene products of <i>epeXEP</i> are necessary and sufficient for the production of the mature antimicrobial peptide EpeX*. In <i>B. subtilis</i>, the <i>epeXEPAB</i> locus is transcribed from three different promoters, one upstream of <i>epeX</i> (P<sub><i>epeX</i></sub>) and two within <i>epeP</i> (P<sub><i>epeA1</i></sub> and P<sub><i>epeA2</i></sub>). While the latter two are mostly constitutive, P<sub><i>epeX</i></sub> shows a growth phase-dependent induction at the onset of stationary phase. We demonstrate that this regulation is the result of the antagonistic action of two global regulators: The transition state regulator AbrB keeps the <i>epe</i> locus shut off during exponential growth by direct binding. This tight repression is relieved by the master regulator of sporulation, Spo0A, which counteracts the AbrB-dependent repression of <i>epeXEPAB</i> expression during the transition to stationary phase. The net result of these three ­promoters is an expression pattern that ensures EpeAB-dependent autoimmunity prior to EpeX* production. In the absence of EpeAB, the general envelope stress response proteins LiaIH can compensate for the loss of specific autoimmunity by providing sufficient protection against the membrane-perturbating action of EpeX*. Hence, the transcriptional regulation of <i>epe</i> expression and the resulting intrinsic induction of the two corresponding resistance functions, encoded by <i>epeAB</i> and <i>liaIH</i>, are well balanced to provide a need-based immunity against mature EpeX*.
DOI: 10.6084/m9.figshare.14769120.v1
title: Supplementary Material for: The Epipeptide Biosynthesis Locus <b><i>epeXEPAB</i></b> Is Widely Distributed in <b><i>Firmicutes</i></b> and Triggers Intrinsic Cell Envelope Stress

description: The <i>epeXEPAB</i> (formerly <i>yydFGHIJ</i>) locus of <i>Bacillus subtilis</i> encodes a minimalistic biosynthetic pathway for a linear antimicrobial epipeptide, EpeX, which is ribosomally produced and post-translationally processed by the action of the radical-SAM epimerase, EpeE, and a membrane-anchored signal 2 peptide peptidase, EpeP. The ABC transporter EpeAB provides intrinsic immunity against self-produced EpeX, without conferring resistance against extrinsically added EpeX. EpeX specifically targets, and severely perturbs the integrity of the cytoplasmic membrane, which leads to the induction of the Lia-dependent envelope stress response. Here, we provide new insights into the distribution, expression, and regulation of the minimalistic <i>epeXEPAB</i> locus of <i>B. subtilis</i>, as well as the biosynthesis and biological efficiency of the produced epipeptide EpeX*. A comprehensive comparative genomics study demonstrates that the <i>epe</i>-locus is restricted to but widely distributed within the phylum <i>Firmicutes</i>. The gene products of <i>epeXEP</i> are necessary and sufficient for the production of the mature antimicrobial peptide EpeX*. In <i>B. subtilis</i>, the <i>epeXEPAB</i> locus is transcribed from three different promoters, one upstream of <i>epeX</i> (P<sub><i>epeX</i></sub>) and two within <i>epeP</i> (P<sub><i>epeA1</i></sub> and P<sub><i>epeA2</i></sub>). While the latter two are mostly constitutive, P<sub><i>epeX</i></sub> shows a growth phase-dependent induction at the onset of stationary phase. We demonstrate that this regulation is the result of the antagonistic action of two global regulators: The transition state regulator AbrB keeps the <i>epe</i> locus shut off during exponential growth by direct binding. This tight repression is relieved by the master regulator of sporulation, Spo0A, which counteracts the AbrB-dependent repression of <i>epeXEPAB</i> expression during the transition to stationary phase. The net result of these three ­promoters is an expression pattern that ensures EpeAB-dependent autoimmunity prior to EpeX* production. In the absence of EpeAB, the general envelope stress response proteins LiaIH can compensate for the loss of specific autoimmunity by providing sufficient protection against the membrane-perturbating action of EpeX*. Hence, the transcriptional regulation of <i>epe</i> expression and the resulting intrinsic induction of the two corresponding resistance functions, encoded by <i>epeAB</i> and <i>liaIH</i>, are well balanced to provide a need-based immunity against mature EpeX*.