cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.jtq7vp
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acalypha ankaranensis I.Montero & Cardiel"
 ]
}

 The dataset includes 13 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006241-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fyucfn
title: Occurrence Download

description: A dataset containing 104 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Abutilon herzogianum R.E.Fr."
 ]
}

 The dataset includes 104 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006302-240216155721649/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wjkye3
title: Occurrence Download

description: A dataset listing the 86 species recorded in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-76.27131 7.0041,-76.27131 7.00285,-76.26983 7.00277,-76.26886 7.0004,-76.27324 6.99884,-76.26738 6.99645,-76.2662 6.99825,-76.26446 6.99733,-76.25972 6.99773,-76.25699 6.99009,-76.26309 6.98509,-76.25015 6.98381,-76.25166 6.98939,-76.25586 7.00035,-76.26276 7.00506,-76.26276 7.00506,-76.27286 7.00801,-76.27328 7.0041,-76.27131 7.0041))"
 ]
}

 The dataset's 86 records were derived from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087529-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.o0lqiq
title: Occurrence Download

description: A dataset containing 8374 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Guatteria sanctae-crucis Maas & Westra",
 "TaxonKey is 138788147",
 "TaxonKey is Handroanthus impetiginosum (Mart. ex DC.) Mattos",
 "TaxonKey is Hebepetalum humiriifolium (Planch.) Benth.",
 "TaxonKey is Hebepetalum humiriifolium (Planch.) Benth. & Hook.f. ex B.D.Jacks.",
 "TaxonKey is Homalium letestui Pellegr.",
 "TaxonKey is Huberantha stuhlmannii",
 "TaxonKey is Huberantha tanganyikensis",
 "TaxonKey is Ilex matthewsii Loes.",
 "TaxonKey is Abantis paradisea (Butler, 1870)",
 "TaxonKey is Blastobasis kenya Adamski, 2010",
 "TaxonKey is Libidibia glabrata",
 "TaxonKey is Licaria canella (Meisn.) Kosterm.",
 "TaxonKey is Nothofagus glauca",
 "TaxonKey is 138886974",
 "TaxonKey is 138769285",
 "TaxonKey is 138769339",
 "TaxonKey is 138769334",
 "TaxonKey is 138769341",
 "TaxonKey is 138769314",
 "TaxonKey is Monotes africanus A.DC.",
 "TaxonKey is 139265204",
 "TaxonKey is 138968391",
 "TaxonKey is Noronhia battiscombei",
 "TaxonKey is Noronhia mannii",
 "TaxonKey is Noronhia mildbraedii",
 "TaxonKey is Noronhia nilotica",
 "TaxonKey is Ocotea oblongoobovata (Nees) Rohwer",
 "TaxonKey is Opuntia santa-rita (Griffiths & Hare) Rose",
 "TaxonKey is 138969107",
 "TaxonKey is Parasassafras confertiflora (Meisn.) D.G.Long",
 "TaxonKey is Phenax grossecrenatus Killip",
 "TaxonKey is Piptostigma mortehani De Wild.",
 "TaxonKey is Pistacia weinmannifolia J.Poiss. ex Franch.",
 "TaxonKey is 138886656",
 "TaxonKey is Polyalthia laui Merr.",
 "TaxonKey is 127902556",
 "TaxonKey is 138919546",
 "TaxonKey is Quercus urbani Trel.",
 "TaxonKey is Rhamnus diffusus Clos",
 "TaxonKey is Roupala sphenophylla Diels ex Sleumer",
 "TaxonKey is Saprosma ternata (Wall.) Hook.f.",
 "TaxonKey is Schinus fasciculata (Griseb.) I.M.Johnst.",
 "TaxonKey is Tainarys venata Burckhardt & Basset, 2000",
 "TaxonKey is Tainarys sordida Burckhardt, 1987",
 "TaxonKey is Schinus microphylla I.M.Johnst.",
 "TaxonKey is Schoenobiblus elliptica Pilg.",
 "TaxonKey is Sinosassafras flavinervia (C.K.Allen) H.W.Li",
 "TaxonKey is 139258898",
 "TaxonKey is 139258907",
 "TaxonKey is 139258028",
 "TaxonKey is Streblus pendulinus (Endl.) F.Muell.",
 "TaxonKey is Styrax guianensis A.DC.",
 "TaxonKey is Tapura juliani J.F.Macbr.",
 "TaxonKey is Turraeanthus africanus (Welw. ex C.DC.) Pellegr.",
 "TaxonKey is Xylosma flexuosum (Kunth) Hemsl.",
 "TaxonKey is Xylosma ruizianum Sleumer",
 "TaxonKey is Xylosma velutina (Tul.) Triana & H.Karst."
 ]
 },
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 8374 records from 245 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013947-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4zqz4w
title: Occurrence Download

description: A dataset containing 137052865 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 137052865 records from 6996 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087604-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.85weyq
title: Occurrence Download

description: A dataset containing 799 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Paragallinula angulata (Sundevall, 1850))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 799 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002518-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/jpca-js42
title: scMASKGAN

description: Single-cell RNA sequencing (scRNA-seq) enables high-resolution analysis of cellular heterogeneity, but dropout events, where gene expression is undetected in individual cells, present a significant challenge. We propose \textbf{scMASKGAN}, which transforms matrix imputation into a pixel restoration task to improve the recovery of missing gene expression data.  Specifically, we integrate masking, convolutional neural networks (CNNs), attention mechanisms, and residual networks (ResNets) to effectively address dropout events in scRNA-seq data. The masking mechanism ensures the preservation of complete cellular information, while convolution and attention mechanisms are employed to capture both global and local features. Residual networks augment feature representation and effectively mitigate the risk of model overfitting. Additionally, cell-type labels are incorporated as constraints to guide the methods in learning more accurate cellular features. Finally, multiple experiments were conducted to evaluate methods performance using seven different data types and scRNA-seq data from ten neuroblastoma samples. The results demonstrate that the data imputed by scMASKGAN not only perform excellently across various evaluation metrics but also significantly enhance the effectiveness of downstream analyses, enabling a more comprehensive exploration of underlying biological information.
DOI: 10.21227/r5x1-7z15
title: scMASKGAN

description: Single-cell RNA sequencing (scRNA-seq) enables high-resolution analysis of cellular heterogeneity, but dropout events, where gene expression is undetected in individual cells, present a significant challenge. We propose \textbf{scMASKGAN}, which transforms matrix imputation into a pixel restoration task to improve the recovery of missing gene expression data.  Specifically, we integrate masking, convolutional neural networks (CNNs), attention mechanisms, and residual networks (ResNets) to effectively address dropout events in scRNA-seq data. The masking mechanism ensures the preservation of complete cellular information, while convolution and attention mechanisms are employed to capture both global and local features. Residual networks augment feature representation and effectively mitigate the risk of model overfitting. Additionally, cell-type labels are incorporated as constraints to guide the methods in learning more accurate cellular features. Finally, multiple experiments were conducted to evaluate methods performance using seven different data types and scRNA-seq data from ten neuroblastoma samples. The results demonstrate that the data imputed by scMASKGAN not only perform excellently across various evaluation metrics but also significantly enhance the effectiveness of downstream analyses, enabling a more comprehensive exploration of underlying biological information.
DOI: 10.15468/dl.a5qmtd
title: Occurrence Download

description: A dataset containing 605 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Sterna albifrons Pallas, 1764)",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 605 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002519-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bup8dq
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cupressus gigantea W.C.Cheng & L.K.Fu"
 ]
}

 The dataset includes 67 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002521-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ecgty
title: Occurrence Download

description: A dataset containing 2624 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Pernis apivorus (Linnaeus, 1758))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 2624 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002520-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6evkgs
title: Occurrence Download

description: A dataset containing 94 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Bangladesh",
 "TaxonKey is Tenualosa ilisha (Hamilton, 1822)"
 ]
}

 The dataset includes 94 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002522-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/70hq-a446
title: SUNBURST Attack Dataset

description: SUNBURST Attack Dataset for Network Attack DetectionOverview:The SUNBURST dataset is a unique and valuable resource for researchers studying network intrusion detection and prevention. This dataset provides real-world network traffic data related to SUNBURST, a sophisticated supply chain attack that exploited the SolarWinds Orion software. It focuses on the behavioral characteristics of the SUNBURST malware, enabling the development and evaluation of security mechanisms.Data Collection Methodology:The dataset was created in a controlled lab environment simulating realistic network traffic.Normal traffic: Captured through typical network activities, including file sharing, web browsing, and video conferencing.Infected traffic: Generated by deploying a trojanized SolarWinds Orion DLL file, enabling detailed monitoring of the SUNBURST backdoor communications and attack patterns.Dataset Features:Attributes: The dataset includes 81 features, such as timestamps, source/destination ports, flow durations, and packet-level statistics, essential for identifying anomalies associated with SUNBURST.Labels: Data is labeled as either "normal" or "abnormal (SUNBURST)" for clear distinction.Format:The dataset is available in CSV format, derived from packet capture (PCAP) files processed using the CICFlowMeter tool. Each row represents a network flow, annotated with its label. The dataset includes both raw network traffic and labeled metadata, suitable for training and validating machine learning models.Applications:The SUNBURST dataset is well-suited for:Developing and testing Intrusion Detection Systems (IDS) and Intrusion Prevention Systems (IPS).Building machine learning models for detecting and mitigating advanced persistent threats (APT) and supply chain attacks.Conducting research on network-based cyber threats.
DOI: 10.15468/dl.qc29yj
title: Occurrence Download

description: A dataset containing 442 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Pachycoccyx audeberti (Schlegel, 1879))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 442 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002523-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fwp2ew
title: Occurrence Download

description: A dataset containing 2256 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Crithagra citrinipectus (Clancey & Lawson, 1960))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 2256 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002524-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ykx8zr
title: Occurrence Download

description: A dataset containing 23053 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Cercotrichas coryphoeus (Vieillot, 1817))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 23053 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002525-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/3yxk-c986
title: TamilNadu Heritage Sites DB

description: Abstract: This dataset offers an extensive compilation of information on heritage sites across Tamil Nadu, India, highlighting the region's rich cultural and historical legacy. Each entry includes attributes such as the site's name, description, historical origin, category, ideal visiting periods, accommodation options, and travel guidelines. The dataset aims to assist researchers, developers, and tourism enthusiasts in creating applications or analyses focused on promoting Tamil Nadu's heritage. Its structured format ensures compatibility with various data processing, visualization, and machine learning tools, making it a valuable resource for heritage preservation and enhancing tourism experiences.
DOI: 10.15468/dl.psmchb
title: Occurrence Download

description: A dataset containing 19438 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Crithagra scotops Sundevall, 1850)",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 19438 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002526-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.te7fbq
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.30_1",
 "Geometry POLYGON((102.44469 24.87875,102.46974 24.90631,102.46974 24.91438,102.44191 24.91438,102.44469 24.87875))"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002528-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27276726.v1
title: Chorus_Galileo_Juno

description: The database are helpful, if anyone would like to reproduce our results in this work.
DOI: 10.6084/m9.figshare.27276726.v2
title: <b>Statistical distribution of chorus waves in Jupiter’s magnetosphere based on Galileo and Juno observations</b>

description: The database are helpful, if anyone would like to reproduce our results in this work.
DOI: 10.15468/dl.uvzt8h
title: Occurrence Download

description: A dataset containing 122323 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Ceryle rudis (Linnaeus, 1758))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 122323 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002527-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fmxh35
title: Occurrence Download

description: A dataset containing 490 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mimosa quitensis Benth."
 ]
}

 The dataset includes 490 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002529-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.se367p
title: Occurrence Download

description: A dataset containing 21980 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Ploceus subaureus A.Smith, 1839)",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 21980 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002530-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4q2wjy
title: Occurrence Download

description: A dataset containing 552 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Pterodroma mollis (Gould, 1844))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 552 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002531-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.njjs84
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Bangladesh",
 "TaxonKey is Pampus argenteus (Euphrasen, 1788)"
 ]
}

 The dataset includes 14 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002532-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28235234
title: SCODA_result_for_GSE264408

description: Ulcerative colitis (UC) is a significant inflammatory bowel disease caused by an abnormal immune response to gut microbes. However, there are still gaps in our understanding of how immune and metabolic changes specifically contribute to this disease. Our research aims to address this gap by examining mouse colons after inducing ulcerative colitis-like symptoms. Employing single-cell RNA-seq and 16 s rRNA amplicon sequencing to analyze distinct cell clusters and microbiomes in the mouse colon at different time points after induction with dextran sodium sulfate. We observe a significant reduction in epithelial populations during acute colitis, indicating tissue damage, with a partial recovery observed in chronic inflammation. Analyses of cell-cell interactions demonstrate shifts in networking patterns among different cell types during disease progression. Notably, macrophage phenotypes exhibit diversity, with a pronounced polarization towards the pro-inflammatory M1 phenotype in chronic conditions, suggesting the role of macrophage heterogeneity in disease severity. Increased expression of <i>Nampt</i> and NOX2 complex subunits in chronic UC macrophages contributes to the inflammatory processes. The chronic UC microbiome exhibits reduced taxonomic diversity compared to healthy conditions and acute UC. The study also highlights the role of T cell differentiation in the context of dysbiosis and its implications in colitis progression, emphasizing the need for targeted interventions to modulate the inflammatory response and immune balance in colitis.