cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7868584
title: TRMMPR and GPM KuPR V8 Level 2A Processed Convective Rain States 2010-2021

description: This dataset contains Interactive Data Language (IDL) .sav files of Convective Rain States (CRS) from 2010-2021 which are created by k-means clustering on TRMMPR Version 8 and GPM KuPR Version 8 Level 2A data. It also contains IDL scripts in the TRMM.zip and GPM.zip file that were used to process the raw TRMMPR and GPM KuPR V8 data into the available CRS data. This set is part 2 in a continuation of the data available in https://doi.org/10.5281/zenodo.7853386. Details on this clustering can be found in Elsaesser et al. (2010) https://doi.org/10.1175/2010JCLI3330.1. Readme: - Each line in the seriesFiles txt files points to the directory where the raw downloaded data was originally held. The raw TRMMPR and GPM KuPR V8 Level 2A data was downloaded from NASA EOSDIS PPS GPM public data archive. - There are two different total number of entries between all the variables in the processed data. This is because some missing values were saved in some variables and not in others. These missing variables are denoted by -1's in the prcid variable (as well as other variables), and can be located and removed under that condition.
description: {"references": ["https://doi.org/10.1175/2010JCLI3330.1"]}
DOI: 10.5281/zenodo.7868583
title: TRMMPR and GPM KuPR V8 Level 2A Processed Convective Rain States 2010-2021

description: This dataset contains Interactive Data Language (IDL) .sav files of Convective Rain States (CRS) from 2010-2021 which are created by k-means clustering on TRMMPR Version 8 and GPM KuPR Version 8 Level 2A data. It also contains IDL scripts in the TRMM.zip and GPM.zip file that were used to process the raw TRMMPR and GPM KuPR V8 data into the available CRS data. This set is part 2 in a continuation of the data available in https://doi.org/10.5281/zenodo.7853386. Details on this clustering can be found in Elsaesser et al. (2010) https://doi.org/10.1175/2010JCLI3330.1. Readme: - Each line in the seriesFiles txt files points to the directory where the raw downloaded data was originally held. The raw TRMMPR and GPM KuPR V8 Level 2A data was downloaded from NASA EOSDIS PPS GPM public data archive. - There are two different total number of entries between all the variables in the processed data. This is because some missing values were saved in some variables and not in others. These missing variables are denoted by -1's in the prcid variable (as well as other variables), and can be located and removed under that condition.
description: {"references": ["https://doi.org/10.1175/2010JCLI3330.1"]}
DOI: 10.6084/m9.figshare.22705069.v1
title: Standard Historical 1985-2005 surface temperature members 1-10

description: Processed monthly surface temperature for members 1-10 of standard historical members
DOI: 10.5281/zenodo.7839447
title: DeepREM: Deep-Learning-Based Radio Environment Map Estimation from Sparse Measurements

description: <strong>DeepREM: Deep-Learning-Based Radio Environment Map Estimation from Sparse Measurements</strong> DeepREM combines two deep-learning models (U-Net and CGAN) that estimate Radio Environment Maps (REMs) from sparse measurements. In this repository, we present the dataset and the interactive app developed to use the resulting models derived from the research. <strong>Urban REMs dataset: </strong>We present a (REM) dataset of urban scenarios. Each map provides coverage information in areas from 2290 x 3670 m<sup>2</sup> to 3810 x 5160 m<sup>2</sup> with a resolution of 10 m. Coverage areas are sampled from Colombian cities (Armenia, Bogota, Cali, Ibague, Manizales, Medellin, and Pasto) and U.S. cities (Columbus and Washington). The simulations include topographic and building vector database information and Intelligent Ray-Tracing as a propagation model. In our <strong>second version</strong>, 400 new REMs were added to the dataset, including 4 new city areas with different topographic and building features (100 REMs for each area). The new cities are Barranquilla, Bucaramanga, Popayan, and North Pasto, all in Colombia. In addition, we also present an interactive application developed in the Streamlit framework to test CGAN and UNET performance in RSRP and BS coverage predictions either with REMs from our dataset or with completely new user-supplied REMs.The repository of the app can be downloaded at the following link: DeepREMapp
DOI: 10.5281/zenodo.7091114
title: DeepREM: Deep-Learning-Based Radio Environment Map Estimation from Sparse Measurements

description: <strong>DeepREM: Deep-Learning-Based Radio Environment Map Estimation from Sparse Measurements</strong> DeepREM combines two deep-learning models (U-Net and CGAN) that estimate Radio Environment Maps (REMs) from sparse measurements. In this repository, we present the dataset and the interactive app developed to use the resulting models derived from the research. <strong>Urban REMs dataset: </strong>We present a (REM) dataset of urban scenarios. Each map provides coverage information in areas from 2290 x 3670 m<sup>2</sup> to 3810 x 5160 m<sup>2</sup> with a resolution of 10 m. Coverage areas are sampled from Colombian cities (Armenia, Bogota, Cali, Ibague, Manizales, Medellin, and Pasto) and U.S. cities (Columbus and Washington). The simulations include topographic and building vector database information and Intelligent Ray-Tracing as a propagation model. In our <strong>second version</strong>, 400 new REMs were added to the dataset, including 4 new city areas with different topographic and building features (100 REMs for each area). The new cities are Barranquilla, Bucaramanga, Popayan, and North Pasto, all in Colombia. In addition, we also present an interactive application developed in the Streamlit framework to test CGAN and UNET performance in RSRP and BS coverage predictions either with REMs from our dataset or with completely new user-supplied REMs.The repository of the app can be downloaded at the following link: DeepREMapp
DOI: 10.6084/m9.figshare.22705024
title: Data by Schneider et al. (2023) Remote sensing-based forest modeling reveals positive effects of functional diversity on productivity at local spatial scale

description: Datasets from the scientific article by Schneider, et al. (2023). Remote sensing-based forest modeling reveals positive effects of functional diversity on productivity at local spatial scale. <br> Please cite: Schneider, F. D., Longo, M., Paul-Limoges, E., Scholl, V. M., Schmid, B., Morsdorf, F., Pavlick, R. P., Schimel, D. S., Schaepman, M. E. & Moorcroft, P. R. (2023). Remote sensing-based forest modeling reveals positive effects of functional diversity on productivity at local spatial scale. <em>JGR Biogeosciences.</em>
DOI: 10.6084/m9.figshare.22704943.v1
title: Ricebean Genome

description: This data set contains Ricebean genome files
DOI: 10.6084/m9.figshare.22705108
title: The 10Be concentrations of the river terraces in Tarim Basin

description: The 10Be concentrations of the river terraces in Tarim Basin
DOI: 10.6084/m9.figshare.22705108.v1
title: The 10Be concentrations of the river terraces in Tarim Basin

description: The 10Be concentrations of the river terraces in Tarim Basin
DOI: 10.6084/m9.figshare.22705045.v1
title: Standard Historical 1985-2005 NH sea ice concentration members 1-10

description: Processed monthly sea ice concentration for members 1-10 of standard historical members
DOI: 10.25345/c5610w268
title: MassIVE MSV000091805 - HeatShockProtein90_in_vitro_FPOP_trypsin______________
title: HeatShockProtein90_in_vitro_FPOP_trypsin__________________________________________________________________
DOI: 10.6084/m9.figshare.22705045.v2
title: Standard RCP4.5 2006-2080 monthly variables members 1-10

description: Processed monthly sea ice concentration for members 1-10 of standard historical members
DOI: 10.6084/m9.figshare.22705189
title: Perov5

description: Please consider citing the following two papers:<br> <br> ```<br> @article{castelli2012new,<br> title={New cubic perovskites for one-and two-photon water splitting using the computational materials repository},<br> author={Castelli, Ivano E and Landis, David D and Thygesen, Kristian S and Dahl, S{\o}ren and Chorkendorff, Ib and Jaramillo, Thomas F and Jacobsen, Karsten W},<br> journal={Energy \& Environmental Science},<br> volume={5},<br> number={10},<br> pages={9034--9043},<br> year={2012},<br> publisher={Royal Society of Chemistry}<br> }<br> ```<br> <br> ```<br> @article{castelli2012computational,<br> title={Computational screening of perovskite metal oxides for optimal solar light capture},<br> author={Castelli, Ivano E and Olsen, Thomas and Datta, Soumendu and Landis, David D and Dahl, S{\o}ren and Thygesen, Kristian S and Jacobsen, Karsten W},<br> journal={Energy \& Environmental Science},<br> volume={5},<br> number={2},<br> pages={5814--5819},<br> year={2012},<br> publisher={Royal Society of Chemistry}<br> }<br> ```
DOI: 10.6084/m9.figshare.22705192
title: Carbon24

description: Please consider citing the following paper:<br> <br> ```<br> @misc{carbon2020data,<br> doi = {10.24435/MATERIALSCLOUD:2020.0026/V1},<br> url = {https://archive.materialscloud.org/record/2020.0026/v1},<br> author = {Pickard, Chris J.},<br> keywords = {DFT, ab initio random structure searching, carbon},<br> language = {en},<br> title = {AIRSS data for carbon at 10GPa and the C+N+H+O system at 1GPa},<br> publisher = {Materials Cloud},<br> year = {2020},<br> copyright = {info:eu-repo/semantics/openAccess}<br> }<br> ```
DOI: 10.6084/m9.figshare.22705213
title: Current State of Botany Education in the Life Sciences

description: Survey responses from the State of Botany in the Life Sciences questionnaire. It includes the questionnaire, plant examples used in the courses, and hands-on experience for undergraduate students.
DOI: 10.6084/m9.figshare.22705213.v1
title: Current State of Botany Education in the Life Sciences

description: Survey responses from the State of Botany in the Life Sciences questionnaire. It includes the questionnaire, plant examples used in the courses, and hands-on experience for undergraduate students.
DOI: 10.25345/c52805830
title: MassIVE MSV000091806 - Mucus production, host-microbiome interactions, hormone sensitivity, and innate immune responses modeled in human endo- and ecto-cervix chips
title: Modulation of mucus production by the human ecto- and endo-cervical epithelium by steroid hormones and associated interactions with commensal microbiome play a central role in the physiology and pathophysiology of the female reproductive tract. However, most of our knowledge about these interactions is based on results from animal studies or in vitro models that fail to faithfully mimic the mucosal environment of the human cervix. Here we describe microfluidic organ-on-a-chip (Organ Chip) models of the human cervical mucosa that recreate the cervical epithelial-stromal interface with a functional epithelial barrier and produce abundant mucus that has compositional, biophysical, and hormone-responsive properties similar to the living cervix. Use of continuous fluid flow promoted ecto-cervical differentiation, whereas use of periodic flow including periods of stasis stimulated endo-cervical specialization. Similar results with minor differences were obtained using epithelial cells isolated from three donors each from a different ethnic background (African American, Hispanic, and Caucasian). When the endo-Cervix Chips were co-cultured with living Lactobacillus crispatus and Gardnerella vaginalis bacterial communities to respectively mimic the effects of human host interactions with optimal (healthy) or non-optimal (dysbiotic) microbiome, significant differences in tissue innate immune responses, barrier function, cell viability, and mucus composition were detected reminiscent of those observed in vivo. Thus, human Cervix Chips provide a physiologically relevant experimental in vitro model to study cervical mucus physiology and its role in human host-microbiome interactions as well as a potential preclinical testbed for development of therapeutic interventions to enhance women's health.
DOI: 10.6084/m9.figshare.22705294
title: MGE Sequence

description: Integrases and transposases sequences were conducted by searching the protein sequences in NCBI RefSeq database (https://www.ncbi.nlm.nih.gov/refseq/). Insertion sequences (ISs) elements sequences were conducted by ISfinder database.
DOI: 10.34740/kaggle/dsv/5534124
title: Youtube Trending Video - Taiwan & Hong Kong
DOI: 10.6084/m9.figshare.22344616
title: PHISTc PF3D7_0936800 raw ELISA and PMR data.csv

description: This project aimed to clone, express and test plasmodium PHISTc protein PF3D7_0936800 for recognition by sera from malaria infected healthy adults. This dataset shows IgG response to schizont extract and plasmodium PHISTc PF3D7_0936800 from malaria infected healthy adults and parasite multiplication rate. It also shows IgG response sto teh positive and negative control sera.
DOI: 10.6084/m9.figshare.22705351
title: Pasture type influence on dung beetle reproduction DATA

description: Data collated from an experiment investigating the influence of pasture type on dung quality and the subsequent impact on Australian dung beetles
DOI: 10.6084/m9.figshare.22705351.v1
title: Pasture type influence on dung beetle reproduction DATA

description: Data collated from an experiment investigating the influence of pasture type on dung quality and the subsequent impact on Australian dung beetles
DOI: 10.5517/ccdc.csd.cc2ck7ry
title: CCDC 2191320: Experimental Crystal Structure Determination

description: Related Article: Andreas C. Hans, Patrick M. Becker, Johanna Haußmann, Simon Suhr, Daniel M. Wanner, Vera Lederer, Felix Willig, Wolfgang Frey, Biprajit Sarkar, Johannes Kästner, René Peters|2023|Angew.Chem.,Int.Ed.|62|e202217519|doi:10.1002/anie.202217519
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ck7t0
title: CCDC 2191322: Experimental Crystal Structure Determination

description: Related Article: Andreas C. Hans, Patrick M. Becker, Johanna Haußmann, Simon Suhr, Daniel M. Wanner, Vera Lederer, Felix Willig, Wolfgang Frey, Biprajit Sarkar, Johannes Kästner, René Peters|2023|Angew.Chem.,Int.Ed.|62|e202217519|doi:10.1002/anie.202217519
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ckhjz
title: CCDC 2191561: Experimental Crystal Structure Determination

description: Related Article: YongZhen Chen, JuJu Liang, ZhiHan Chang, XiuLi Wang|2023|Inorg.Chim.Acta|552|121490|doi:10.1016/j.ica.2023.121490
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ckhk0
title: CCDC 2191562: Experimental Crystal Structure Determination

description: Related Article: YongZhen Chen, JuJu Liang, ZhiHan Chang, XiuLi Wang|2023|Inorg.Chim.Acta|552|121490|doi:10.1016/j.ica.2023.121490
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cmywv
title: CCDC 2193928: Experimental Crystal Structure Determination

description: Related Article: Lydia A. Panther, Monika Stankunaite, Manvendra Sharma, John Spencer, Barnaby W. Greenland|2023|Eur.J.Org.Chem.|26|e202201321|doi:10.1002/ejoc.202201321
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cmyxw
title: CCDC 2193929: Experimental Crystal Structure Determination

description: Related Article: Lydia A. Panther, Monika Stankunaite, Manvendra Sharma, John Spencer, Barnaby W. Greenland|2023|Eur.J.Org.Chem.|26|e202201321|doi:10.1002/ejoc.202201321
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.16551157.v1
title: Additional file 7 of Long noncoding RNA SNHG1 promotes TERT expression by sponging miR-18b-5p in breast cancer

description: Additional file 7: Table S5. The expression profile of coding gene in breast cancer was extracted from TCGA BRCA expression profile.
DOI: 10.6084/m9.figshare.9211139
title: Additional file 7 of Genome-wide exploration and characterization of miR172/euAP2 genes in Brassica napus L. for likely role in flower organ development

description: : Table S7 Primers used for qRT-PCR of euAP2 genes in B.napus (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9211139.v1
title: Additional file 7 of Genome-wide exploration and characterization of miR172/euAP2 genes in Brassica napus L. for likely role in flower organ development

description: : Table S7 Primers used for qRT-PCR of euAP2 genes in B.napus (XLSX 10 kb)
DOI: 10.6084/m9.figshare.9735443.v1
title: Metabonomics on <i>Candida albicans</i> indicate the excessive H3K56ac is involved in the antifungal activity of Shikonin

description: Development of antifungal agents with novel mechanism and low toxicity are essential due to the prevalence of the infectious diseases caused by <i>Candida albicans</i>. The current study employed a new research method, which combined the ultra-high performance liquid chromatography with quadrupole time-of-flight mass spectrometry and gas chromatography-mass spectrometry, to investigate the intrinsic mechanism of Shikonin (SK) against <i>C. albicans</i>. The levels of 27 metabolites, which mainly involved in histone deacetylation, amino acid synthesis, lipid synthesis, nitrogen metabolism, tricarboxylic acid cycle, oxidative stress and glycolysis, were remarkably changed upon SK treatment. Specially, the down-regulation of nicotinamide (NAM) upon SK treatment indicated the suppression of the deacetylation of the histone H3 on lysine 56 residue (H3K56). Further experiment confirmed that the level of H3K56 acetylation (H3K56ac) was dramatically increased upon SK treatment which was mediated by <i>HST3</i>, the gene encoding the H3K56 deacetylase (Hst3p). Our results demonstrated that SK is the first natural compound reported to execute antifungal activity directly via boosting H3K56ac mediated by <i>HST3</i>. Importantly, this finding shed new light on the mechanisms to relieve the side effects or reverse the drug tolerance, as well as the development of agents for antifungal therapies.
DOI: 10.6084/m9.figshare.14978338
title: Additional file 2 of A novel risk score system for prognostic evaluation in adenocarcinoma of the oesophagogastric junction: a large population study from the SEER database and our center

description: Additional file 2 Supplementary Table 2. Sample sizes of patients with different cancers based on the SEER database over the last two years.
DOI: 10.6084/m9.figshare.14978338.v1
title: Additional file 2 of A novel risk score system for prognostic evaluation in adenocarcinoma of the oesophagogastric junction: a large population study from the SEER database and our center

description: Additional file 2 Supplementary Table 2. Sample sizes of patients with different cancers based on the SEER database over the last two years.
DOI: 10.6084/m9.figshare.14978341.v1
title: Additional file 3 of A novel risk score system for prognostic evaluation in adenocarcinoma of the oesophagogastric junction: a large population study from the SEER database and our center

description: Additional file 3 Supplementary Table 3. The comparison of our study and two previous studies on AEG patients.
DOI: 10.6084/m9.figshare.14978341
title: Additional file 3 of A novel risk score system for prognostic evaluation in adenocarcinoma of the oesophagogastric junction: a large population study from the SEER database and our center

description: Additional file 3 Supplementary Table 3. The comparison of our study and two previous studies on AEG patients.
DOI: 10.6084/m9.figshare.8162609
title: Moderate-intensity exercise allows enhanced protection against oxidative stress-induced cardiac dysfunction in spontaneously hypertensive rats

description: The progression of myocardial injury secondary to hypertension is a complex process related to a series of physiological and molecular factors including oxidative stress. This study aimed to investigate whether moderate-intensity exercise (MIE) could improve cardiac function and oxidative stress in spontaneously hypertensive rats (SHRs). Eight-week-old male SHRs and age-matched male Wistar-Kyoto rats were randomly assigned to exercise training (treadmill running at a speed of 20 m/min for 1 h continuously) or kept sedentary for 16 weeks. Cardiac function was monitored by polygraph; cardiac mitochondrial structure was observed by scanning electron microscope; tissue free radical production was measured using dihydroethidium staining. Expression levels of SIRT3 and SOD2 protein were measured by western blot, and cardiac antioxidants were assessed by assay kits. MIE improved the cardiac function of SHRs by decreasing left ventricular systolic pressure (LVSP), and first derivation of LVP (+LVdP/dtmax and −LVdP/dtmax). In addition, exercise-induced beneficial effects in SHRs were mediated by decreasing damage to myocardial mitochondrial morphology, decreasing production of reactive oxygen species, increasing glutathione level, decreasing oxidized glutathione level, increasing expression of SIRT3/SOD2, and increasing activity of superoxide dismutase. Exercise training in SHRs improved cardiac function by inhibiting hypertension-induced myocardial mitochondrial damage and attenuating oxidative stresses, offering new insights into prevention and treatment of hypertension.