cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.13384787
title: Repository of NbS guidance material

description: NbS Guidance Repository 

The NbS Guidance Repository is a collection of guides, handbooks, manuals, toolboxes, and other guidance materials. These resources are specifically designed to facilitate knowledge brokering and capacity-building on Nature-based Solutions (NbS) for a diverse group of non-academic actors. The guidance materials contain information on specific actions supporting the governance, planning, implementation, management, and monitoring of NbS or related concepts that work with nature, such as Green Infrastructure, Urban Forestry, and Ecosystem-based Adaptation. Additionally, they address challenges related to planning and implementing NbS, including issues with climate change adaptation, biodiversity enhancement, and environmental justice.

The repository is established as part of the European Union Horizon 2020 project, CONEXUS, to catalogue the current status of guidance materials. Many European-funded research and innovation projects similarly transferred their gained knowledge and perspectives on NbS through guidance materials. Different platforms, like OPPLA, bring these materials together, yet the focus is Europe-centric. However, as several projects have involved cases outside Europe, such as CONEXUS’ cooperation with Latin American cities, this repository specifically included guidance materials from or relevant to Latin America. Thus, the collected guidance material focuses on urban contexts in Latin America and Europe, but materials with a global emphasis are also included. The materials are available in digital format, as PDFs (portable digital documents) or websites, to ensure easy accessibility.

The guidance materials were collected from different avenues, such as published literature like the review of European NbS projects by Wild et al. (2020) and resource databases like NetworkNature. To supplement the collected guidance materials with more examples relevant to Latin America, CONEXUS partners and practitioners from the region who were engaged were asked to mention the NbS guidance materials they know about. Additional materials were collected through an internet search using the Google search engine in Spanish and Portuguese and through snowballing. As the focus is on materials targeted at non-academic users, scientific databases were not consulted.
DOI: 10.5281/zenodo.13384788
title: Repository of NbS guidance material

description: NbS Guidance Repository 

The NbS Guidance Repository is a collection of guides, handbooks, manuals, toolboxes, and other guidance materials. These resources are specifically designed to facilitate knowledge brokering and capacity-building on Nature-based Solutions (NbS) for a diverse group of non-academic actors. The guidance materials contain information on specific actions supporting the governance, planning, implementation, management, and monitoring of NbS or related concepts that work with nature, such as Green Infrastructure, Urban Forestry, and Ecosystem-based Adaptation. Additionally, they address challenges related to planning and implementing NbS, including issues with climate change adaptation, biodiversity enhancement, and environmental justice.

The repository is established as part of the European Union Horizon 2020 project, CONEXUS, to catalogue the current status of guidance materials. Many European-funded research and innovation projects similarly transferred their gained knowledge and perspectives on NbS through guidance materials. Different platforms, like OPPLA, bring these materials together, yet the focus is Europe-centric. However, as several projects have involved cases outside Europe, such as CONEXUS’ cooperation with Latin American cities, this repository specifically included guidance materials from or relevant to Latin America. Thus, the collected guidance material focuses on urban contexts in Latin America and Europe, but materials with a global emphasis are also included. The materials are available in digital format, as PDFs (portable digital documents) or websites, to ensure easy accessibility.

The guidance materials were collected from different avenues, such as published literature like the review of European NbS projects by Wild et al. (2020) and resource databases like NetworkNature. To supplement the collected guidance materials with more examples relevant to Latin America, CONEXUS partners and practitioners from the region who were engaged were asked to mention the NbS guidance materials they know about. Additional materials were collected through an internet search using the Google search engine in Spanish and Portuguese and through snowballing. As the focus is on materials targeted at non-academic users, scientific databases were not consulted.
DOI: 10.15468/dl.f5t3qy
title: Occurrence Download

description: A dataset containing 867 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Living Specimen)",
 "TaxonKey is Nothofagus pumilio (Poepp. & Endl.) Krasser",
 "Year 1995-2024"
 ]
}

 The dataset includes 867 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0106393-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.12573131
title: Database for GWAS SVatalog: a visualization tool to aid fine-mapping of GWAS loci with structural variations.

description: GWAS SVatalog is a novel visualization tool and database for structural variants (SV) found in a predominantly European population of 101 individuals with Cystic Fibrosis (CF). Aside from the CF-causing variants on chromosome 7 and the LD block in which they lie, the remainder of the genome is comparable to a the 1000 Genomes healthy European population. This data is a collection of SV calls and their linkage disequilibrium (LD) statistics with GWAS-significant SNPs reported in the GWAS Catalog.

 

The goal of this project is to provide a resource to aid fine mapping of GWAS loci using SVs. GWAS loci are generally identified by SNPs which account for an incomplete proportion of genetic variation and phenotypic heritability. Their relevance to the phenotype might be limited, tagging other polymorphisms, such as SVs, that could be the cause of the association signal. To leverage this data to its full potential, visit the GWAS SVatalog web tool. Here, interactive visualizations can illustrate SVs identified in high LD with GWAS-significant SNPs, suggesting putative causal variation that could guide additional functional investigation.

 

For more information on how to use GWAS SVatalog, visit the documentation.

 

This project was accomplished in collaboration with the Strug Lab at The Hospital for Sick Children (SickKids), The Center for Applied Genomics (TCAG), and University of Toronto.
description: File descriptions:



gwas_catalog_v1.0-associations_e108.tsv : GWAS Catalog v1.0 associations data

MANE.GRCh38.v1.0.ensembl_genomic.gtf : MANE dataset v1.0 for genes in the human genome

sv_annotations.tsv : SV calls annotated using a pipeline based on CNV/SV callers Dragen 3.8.4, Manta 1.6.0, Delly 0.8.1, CNVnator 0.4 and ERDS 1.1

chr*_allele_freq.txt : Allele frequencies of SNPs and SVs in the CF cohort and gnomAD's Non-Finnish European (NFE) population. Also includes official variant name obtained from dbSNP

chr*_ld_stats.txt : LD statistics between SNPs and SVs
DOI: 10.5281/zenodo.13367574
title: Database for GWAS SVatalog: a visualization tool to aid fine-mapping of GWAS loci with structural variations.

description: GWAS SVatalog is a novel visualization tool and database for structural variants (SV) found in a predominantly European population of 101 individuals with Cystic Fibrosis (CF). Aside from the CF-causing variants on chromosome 7 and the LD block in which they lie, the remainder of the genome is comparable to a the 1000 Genomes healthy European population. This data is a collection of SV calls and their linkage disequilibrium (LD) statistics with GWAS-significant SNPs reported in the GWAS Catalog.

 

The goal of this project is to provide a resource to aid fine mapping of GWAS loci using SVs. GWAS loci are generally identified by SNPs which account for an incomplete proportion of genetic variation and phenotypic heritability. Their relevance to the phenotype might be limited, tagging other polymorphisms, such as SVs, that could be the cause of the association signal. To leverage this data to its full potential, visit the GWAS SVatalog web tool. Here, interactive visualizations can illustrate SVs identified in high LD with GWAS-significant SNPs, suggesting putative causal variation that could guide additional functional investigation.

 

For more information on how to use GWAS SVatalog, visit the documentation.

 

This project was accomplished in collaboration with the Strug Lab at The Hospital for Sick Children (SickKids), The Center for Applied Genomics (TCAG), and University of Toronto.
description: File descriptions:



gwas_catalog_v1.0-associations_e108.tsv : GWAS Catalog v1.0 associations data

MANE.GRCh38.v1.0.ensembl_genomic.gtf : MANE dataset v1.0 for genes in the human genome

sv_annotations.tsv : SV calls annotated using a pipeline based on CNV/SV callers Dragen 3.8.4, Manta 1.6.0, Delly 0.8.1, CNVnator 0.4 and ERDS 1.1

chr*_allele_freq.txt : Allele frequencies of SNPs and SVs in the CF cohort and gnomAD's Non-Finnish European (NFE) population. Also includes official variant name obtained from dbSNP

chr*_ld_stats.txt : LD statistics between SNPs and SVs
DOI: 10.5519/qd.9s4lbo6x
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (694985 records)
DOI: 10.24400/527896/a01-2024.008
title: Range latitudinal empirical correction for Jason-1/2/3 GDR

description: This dataset provides an abacus to correct from the effect of a rounding error in the ground processing of the Jason-1, Jason-2 and Jason-3 missions on the altimeter range estimation
DOI: 10.15468/dl.k6padn
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((106.67954 -5.94871,104.32086 -6.51713,106.25069 -8.00603,114.54182 -9.34848,114.11297 -8.00603,114.75624 -7.22674,113.11231 -7.43942,110.68215 -6.16194,106.67954 -5.94871))",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhododendron citrinum (Hassk.) Hassk."
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0106395-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kjjqur
title: Occurrence Download

description: A dataset containing 3701 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Boletus edulis Bull.",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 3701 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0106394-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2cxqmn
title: CCDC 2202352: Experimental Crystal Structure Determination

description: Related Article: Yu Liang, Huimin Zhao, Qiwei Wang, Xuanni Chen, Qin Li, Weiguang Sun, Chunmei Chen, Hucheng Zhu, Yonghui Zhang|2024|Phytochemistry|220|114012|doi:10.1016/j.phytochem.2024.114012
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jjwgf
title: CCDC 2339925: Experimental Crystal Structure Determination

description: Related Article: Milica Savić, Andrej Pevec, Nevena Stevanović, Irena Novaković, Ivana Z. Matić, Nina Petrović, Tatjana Stanojković, Karla Milčić, Matija Zlatar, Iztok Turel, Božidar Čobeljić, Miloš Milčić, Maja Gruden|2024|Dalton Trans.|53|13436|doi:10.1039/D4DT01353K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jjwhg
title: CCDC 2339926: Experimental Crystal Structure Determination

description: Related Article: Milica Savić, Andrej Pevec, Nevena Stevanović, Irena Novaković, Ivana Z. Matić, Nina Petrović, Tatjana Stanojković, Karla Milčić, Matija Zlatar, Iztok Turel, Božidar Čobeljić, Miloš Milčić, Maja Gruden|2024|Dalton Trans.|53|13436|doi:10.1039/D4DT01353K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jjwjh
title: CCDC 2339927: Experimental Crystal Structure Determination

description: Related Article: Milica Savić, Andrej Pevec, Nevena Stevanović, Irena Novaković, Ivana Z. Matić, Nina Petrović, Tatjana Stanojković, Karla Milčić, Matija Zlatar, Iztok Turel, Božidar Čobeljić, Miloš Milčić, Maja Gruden|2024|Dalton Trans.|53|13436|doi:10.1039/D4DT01353K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jrdtj
title: CCDC 2346198: Experimental Crystal Structure Determination

description: Related Article: Maryam Jabbarpoor, Jesse LeBlanc, Zichuan Chen, Dusty Cadwallader, Christine M. Le|2024|Chem.Commun.|60|8700|doi:10.1039/D4CC02431A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jrkd8
title: CCDC 2346340: Experimental Crystal Structure Determination

description: Related Article: Yixing He, Zhi Yu, Yanzi Jiang, Jinjie Zhu, Selina X. Yao, Wenjie Liang, François Diederich, Martin Saunders, Hai Xu|2024|Chem.Commun.|60|8716|doi:10.1039/D4CC02695K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jsbpc
title: CCDC 2347093: Experimental Crystal Structure Determination

description: Related Article: Maryam Jabbarpoor, Jesse LeBlanc, Zichuan Chen, Dusty Cadwallader, Christine M. Le|2024|Chem.Commun.|60|8700|doi:10.1039/D4CC02431A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jv47s
title: CCDC 2348815: Experimental Crystal Structure Determination

description: Related Article: Xuejian Li, Qinglong Liu, Wangze Song|2024|Chem.Commun.|60|8756|doi:10.1039/D4CC02894E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k3sdw
title: CCDC 2357128: Experimental Crystal Structure Determination

description: Related Article: Doriana T. Ungur, Arianna Lanza, Danny Stam, Carmen Guguta, Coca Iordache, Victor Fruth, Gustavo Santiso-Quinones, Mihaela M. Pop|2024|CrystEngComm|26|4295|doi:10.1039/D4CE00518J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k3sfx
title: CCDC 2357129: Experimental Crystal Structure Determination

description: Related Article: Doriana T. Ungur, Arianna Lanza, Danny Stam, Carmen Guguta, Coca Iordache, Victor Fruth, Gustavo Santiso-Quinones, Mihaela M. Pop|2024|CrystEngComm|26|4295|doi:10.1039/D4CE00518J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k45lh
title: CCDC 2357506: Experimental Crystal Structure Determination

description: Related Article: Abinash Pradhan, Rajanikanta Rana, Gopalan Rajaraman, Monalisa Pradhan, Saroj L. Samal|2024|Dalton Trans.|53|13628|doi:10.1039/D4DT01692K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k45mj
title: CCDC 2357507: Experimental Crystal Structure Determination

description: Related Article: Abinash Pradhan, Rajanikanta Rana, Gopalan Rajaraman, Monalisa Pradhan, Saroj L. Samal|2024|Dalton Trans.|53|13628|doi:10.1039/D4DT01692K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k45nk
title: CCDC 2357508: Experimental Crystal Structure Determination

description: Related Article: Abinash Pradhan, Rajanikanta Rana, Gopalan Rajaraman, Monalisa Pradhan, Saroj L. Samal|2024|Dalton Trans.|53|13628|doi:10.1039/D4DT01692K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jj8dr
title: CCDC 2339334: Experimental Crystal Structure Determination

description: Related Article: Chetan Chauhan, Tanuj, Rajesh Kumar, Jitendra Kumar, Subhash Sharma, Samia Benmansour, Santosh Kumar|2024|Dalton Trans.|53|13638|doi:10.1039/D4DT01463D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kb6dj
title: CCDC 2363297: Experimental Crystal Structure Determination

description: Related Article: Tatjana Terschüren, Gregor Schnakenburg, Rainer Streubel|2024|Dalton Trans.|53|13335|doi:10.1039/D4DT01817F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kb6fk
title: CCDC 2363298: Experimental Crystal Structure Determination

description: Related Article: Tatjana Terschüren, Gregor Schnakenburg, Rainer Streubel|2024|Dalton Trans.|53|13335|doi:10.1039/D4DT01817F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jpfqd
title: CCDC 2344304: Experimental Crystal Structure Determination

description: Related Article: Manman Chang, Nan Li, Lingxiao Guo, Yijia Zhang, Xiao-Ting Liu, Chao Lu|2024|Chem.Commun.|60|8696|doi:10.1039/D4CC01831A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f6rcs
title: CCDC 2240815: Experimental Crystal Structure Determination

description: Related Article: Peng-Yun Zhang, Chen Lian, Zhen-Wen Wang, Juan Chen, Hongjin Lv, Guo-Yu Yang|2024|Dalton Trans.|53|13409|doi:10.1039/D4DT00928B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kmvvx
title: CCDC 2372580: Experimental Crystal Structure Determination

description: Related Article: Suraj Singh, Rohtash Kumar, Navneet Nandgopal Dubey, Chandrakumar Appayee|2024|Chem.Commun.|60|8768|doi:10.1039/D4CC03132F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5519/qd.vyshk82k
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (7 records)