cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25919/g5w0-nh34
title: Southern HII Region Discovery Survey (SHRDS): Dataset 13

description: The Southern HII Region Discovery Survey is an Australia Telescope Compact Array 4-6 and 8-10 GHz radio continuum and radio recombination line survey of Milky Way HII regions (Wenger et al., 2021). This data archive contains all relevant intermediate data products from the final SHRDS data release (the Full Catalog). For each observed HII region and calibrator field, this archive contains (1) a 4 GHz bandwidth, full-Stokes, multi-scale, multi-frequency synthesis (MS-MFS) continuum FITS image, (2) up to sixteen 256 MHz bandwidth, full-Stokes, MS-MFS continuum FITS images covering the full 4 GHz bandwidth, (3) a Stokes I MS-MFS FITS image of each RRL transition, (4) a Stokes I multi-scale FITS data cube of each RRL transition, and (5) a FITS image containing the watershed segmentation region for each identified HII region at each observed frequency. The archive also includes the relevant residual images/cubes and primary beam images for all of these data products, as well as all of the images and cubes smoothed to a common angular resolution.
DOI: 10.34808/5fyk-5t73
title: Phylogenetic trees of genus Oncidium Sw. based on analysis of DNA sequences

description: Genus Oncidium Sw. is widely regarded as a polyphiletic, and the taxonomic boundaries between him and such genera as Odontoglossum Kunth. or Miltonia Lindley remain blurred. The goal of the study was to determine the phylogenetic relationships within the genus Oncidium s.lato based on the DNA sequences analysis. The correlation between molecular data and geographical distribution of the studied species was also examined. Two markers were used for the analysis: the ITS sequence derived from the nuclear genome and the matK gene that is part of mitochondrial DNA. Sequences were obtained by DNA isolation from frozen leaves, polymerase chain reaction (PCR) and sequencing. For their analysis in the PAUP* program, a feature-based parsimony (MP) method was used, and for assessing the reliability of the resulting trees, the non-parametric bootstrap method. The ITS MP search resulted in 10 000 trees (CI=0.49; RI=0.631). The aligned matrix resulted in 814 characters of which 433 were parsimony informative. The matK MP search resulted in 10 000 trees (CI=0.505; RI=0.714). The aligned matrix resulted in 1359 characters of which 358 were parsimony informative. 
This dataset contains two image files with phylogenetic trees - the first one based on ITS analysis of 190 species and the second one based on the matK analysis of 154 species. The upper numbers above branches are the Fitch values and lower numbers are the bootstrap values. The information about geographical distribution is added.  The dataset includes also two NEXUS files (for ITS and for matK) with DNA sequences.
DOI: 10.6084/m9.figshare.14704002
title: The Relationship between Memory Specificity and Memory Coherence in Depression

description: In this manuscript we show that the mediated effect of memory specificity between depression and memory consistency was identified. In addition, the effect of perfect match was shown to confirm the importance of memory specificity. <br>we submit a table of demographic characteristics of the participants in this study and the correlation between each variable as supplementary material.<br>
DOI: 10.6084/m9.figshare.14704002.v2
title: The Relationship between Memory Specificity and Memory Coherence in Depression

description: In this manuscript we show that the mediated effect of memory specificity between depression and memory consistency was identified. In addition, the effect of perfect match was shown to confirm the importance of memory specificity. <br>we submit a table of demographic characteristics of the participants in this study and the correlation between each variable as supplementary material.<br>
DOI: 10.6084/m9.figshare.14704002.v1
title: data set.xlsx

description: In this manuscript we show that the mediated effect of memory specificity between depression and memory consistency was identified. In addition, the effect of perfect match was shown to confirm the importance of memory specificity. <br>we submit a table of demographic characteristics of the participants in this study and the correlation between each variable as supplementary material.<br>
DOI: 10.25952/8fhk-ev74
title: Authoritarian Regimes in Small Island States

description: This dataset contains audio recordings of interviews conducted in the three countries Fiji, Maldives and Seychelles, as part of the primary data for this PhD thesis. The interviewees comprise of government leaders, politicians, senior officials, academics, as well as prominent persons and officials from the civil society and the private sector. The audio recordings are in the .mp3 format. This is a closed dataset. It is not available for viewing to anyone. Only the creator of the dataset has permission to use this dataset.
description: The Thesis for this Dataset can be found here: <a href="https://hdl.handle.net/1959.11/30669">https://hdl.handle.net/1959.11/30669</a>.
description: Some of the persons interviewed have requested that their names should be kept confidential. Their names are not to be publicised or mentioned, when utilising the information they have disclosed.
DOI: 10.5281/zenodo.4876758
title: Dataset of Vp and Vs values

description: The data stored here is the results of Vp and Vs profiles in the paper ‘Vp and Vs structure estimations from ambient seafloor noise observed by distributed acoustic sensing’, by Tonegawa et al. The format is described in README file.
DOI: 10.6084/m9.figshare.14704230
title: Supplementary Material for: The Prevalence of Atopic Manifestations in 313 Iranian Patients with Inborn Errors of Immunity

description: <b><i>Introduction:</i></b> Inborn errors of immunity (IEIs) are rare inherited disorders with a broad spectrum of manifestations. Here, we aimed to delineate the atopy burden in a cohort of patients with IEIs. <b><i>Methods:</i></b> 313 patients with IEIs were enrolled in the study within a 9-years period, and data were collected via a questionnaire. All statistical analyses were performed using SPSS software (v. 25.0, Chicago, IL, USA). The statistical significance level was set at <i>p</i> &lt; 0.05. <b><i>Results:</i></b> Overall, 51 out of 313 (16.3%) patients were identified to have atopic manifestations. Food allergy was detected in 34 (10.2%), atopic dermatitis in 21 (6.7%), as well as allergic asthma and allergic rhinitis each in 4 (1.3%) patients. The allergic disorders were reported as initial manifestations among 14 out of 35 (40.0%) atopic patients. Most of these 51 patients fell within the category of combined immunodeficiency (CID) (<i>n</i> = 38, 74.5%), followed by, severe CID (SCID) (<i>n</i> = 5, 9.8%), common variable immunodeficiency (<i>n</i> = 3, 5.9%), chronic granulomatous disease (<i>n</i> = 3, 5.9%), selective IgA deficiency (<i>n</i> = 1, 2.0%), and leukocyte adhesion defect (<i>n</i> = 1, 2.0%). No patient with Mendelian susceptibility to mycobacteria was found to have atopic manifestation. Atopic dermatitis (<i>p</i> = 0.001) and food allergy (<i>p</i> &lt; 0.001) were both significantly higher in patients with CID than in other IEI groups. Among atopic patients with CID and SCID, food allergy and atopic dermatitis were the most prevalent comorbidities. <b><i>Discussion/Conclusion:</i></b> Atopic diseases may contribute to the clinical picture of IEIs, particularly in patients with CID. Atopy in association with other warning signs of IEIs increases the possibility of an underlying IEI.
DOI: 10.25919/amgx-p254
title: Southern HII Region Discovery Survey (SHRDS): Dataset 15

description: The Southern HII Region Discovery Survey is an Australia Telescope Compact Array 4-6 and 8-10 GHz radio continuum and radio recombination line survey of Milky Way HII regions (Wenger et al., 2021). This data archive contains all relevant intermediate data products from the final SHRDS data release (the Full Catalog). For each observed HII region and calibrator field, this archive contains (1) a 4 GHz bandwidth, full-Stokes, multi-scale, multi-frequency synthesis (MS-MFS) continuum FITS image, (2) up to sixteen 256 MHz bandwidth, full-Stokes, MS-MFS continuum FITS images covering the full 4 GHz bandwidth, (3) a Stokes I MS-MFS FITS image of each RRL transition, (4) a Stokes I multi-scale FITS data cube of each RRL transition, and (5) a FITS image containing the watershed segmentation region for each identified HII region at each observed frequency. The archive also includes the relevant residual images/cubes and primary beam images for all of these data products, as well as all of the images and cubes smoothed to a common angular resolution.
DOI: 10.6084/m9.figshare.14704326
title: Supplementary Material for: Impact of the COVID-19 Pandemic on Surgical Oncology in Europe: Results of a European Survey

description: <b><i>Background:</i></b> The first COVID-19 pandemic wave hit most of the health-care systems worldwide. The present survey aimed to provide a European overview on the COVID-19 impact on surgical oncology. <b><i>Methods:</i></b> This anonymous online survey was accessible from April 24 to May 11, 2020, for surgeons (<i>n</i> = 298) who were contacted by the surgical society European Digestive Surgery. The survey was completed by 88 surgeons (29.2%) from 69 different departments. The responses per department were evaluated. <b><i>Results:</i></b> Of the departments, 88.4% (<i>n</i> = 61/69) reported a lower volume of patients in the outpatient clinic; 69.1% (<i>n</i> = 47/68) and 75.0% (<i>n</i> = 51/68) reported a reduction in hospital bed and the operating room capacity, respectively. As a result, the participants reported an average reduction of 29.3% for all types of oncological resections surveyed in this questionnaire. The strongest reduction was observed for oncological resections of hepato-pancreatico-biliary (HPB) cancers. Of the interviewed surgeons, 68.7% (<i>n</i> = 46/67) agreed that survival outcomes will be negatively impacted by the pandemic. <b><i>Conclusion:</i></b> The first COVID-19 pandemic wave had a significant impact on surgical oncology in Europe. The surveyed surgeons expect an increase in the number of unresectable cancers as well as poorer survival outcomes due to cancellations of follow-ups and postponements of surgeries.
DOI: 10.25919/v1mz-g390
title: Southern HII Region Discovery Survey (SHRDS): Dataset 14

description: The Southern HII Region Discovery Survey is an Australia Telescope Compact Array 4-6 and 8-10 GHz radio continuum and radio recombination line survey of Milky Way HII regions (Wenger et al., 2021). This data archive contains all relevant intermediate data products from the final SHRDS data release (the Full Catalog). For each observed HII region and calibrator field, this archive contains (1) a 4 GHz bandwidth, full-Stokes, multi-scale, multi-frequency synthesis (MS-MFS) continuum FITS image, (2) up to sixteen 256 MHz bandwidth, full-Stokes, MS-MFS continuum FITS images covering the full 4 GHz bandwidth, (3) a Stokes I MS-MFS FITS image of each RRL transition, (4) a Stokes I multi-scale FITS data cube of each RRL transition, and (5) a FITS image containing the watershed segmentation region for each identified HII region at each observed frequency. The archive also includes the relevant residual images/cubes and primary beam images for all of these data products, as well as all of the images and cubes smoothed to a common angular resolution.
DOI: 10.6084/m9.figshare.14704566
title: Prevalence of gastrointestinal symptoms, severity of dysphagia, and their correlation with severity of amyotrophic lateral sclerosis in a Mexican cohort.xlsx

description: This is the data obtained from 43 Mexican patients diagnosed with amyotrophic lateral sclerosis (ALS). The presence and severity of gastrointestinal (GI) symptoms and dysphagia were identified by means of the Gastrointestinal Symptom Rating Scale (GSRS) and the Functional Outcome Swallowing Scale (FOSS). The Revised ALS Functional Rating Scale (ALSFRS-R) was utilized to determine the severity of ALS. ALSFRS-R scores were divided into two categories: those with mild to moderate ALS (≥40-30 points) and patients with moderate to advanced ALS (29-≤20 points). <br>
DOI: 10.6084/m9.figshare.14704566.v1
title: Prevalence of gastrointestinal symptoms, severity of dysphagia, and their correlation with severity of amyotrophic lateral sclerosis in a Mexican cohort.xlsx

description: This is the data obtained from 43 Mexican patients diagnosed with amyotrophic lateral sclerosis (ALS). The presence and severity of gastrointestinal (GI) symptoms and dysphagia were identified by means of the Gastrointestinal Symptom Rating Scale (GSRS) and the Functional Outcome Swallowing Scale (FOSS). The Revised ALS Functional Rating Scale (ALSFRS-R) was utilized to determine the severity of ALS. ALSFRS-R scores were divided into two categories: those with mild to moderate ALS (≥40-30 points) and patients with moderate to advanced ALS (29-≤20 points). <br>
DOI: 10.5517/ccdc.csd.cc21bljj
title: CCDC 1887017: Experimental Crystal Structure Determination

description: Related Article: Bing-Chao Yan, Min Zhou, Jian Li, Xiao-Nian Li, Shi-Jun He, Jian-Ping Zuo, Han-Dong Sun, Ang Li, Pema-Tenzin Puno|2021|Angew.Chem.,Int.Ed.|60|12859|doi:10.1002/anie.202100288
DOI: 10.5517/ccdc.csd.cc21blkk
title: CCDC 1887018: Experimental Crystal Structure Determination

description: Related Article: Bing-Chao Yan, Min Zhou, Jian Li, Xiao-Nian Li, Shi-Jun He, Jian-Ping Zuo, Han-Dong Sun, Ang Li, Pema-Tenzin Puno|2021|Angew.Chem.,Int.Ed.|60|12859|doi:10.1002/anie.202100288
DOI: 10.5517/ccdc.csd.cc22504f
title: CCDC 1911433: Experimental Crystal Structure Determination

description: Related Article: Maddali L. N. Rao, Sk Shamim Islam|2021|Org.Lett.|23|3944|doi:10.1021/acs.orglett.1c01109
DOI: 10.5517/ccdc.csd.cc22505g
title: CCDC 1911434: Experimental Crystal Structure Determination

description: Related Article: Maddali L. N. Rao, Sk Shamim Islam|2021|Org.Lett.|23|3944|doi:10.1021/acs.orglett.1c01109
DOI: 10.5517/ccdc.csd.cc22509l
title: CCDC 1911438: Experimental Crystal Structure Determination

description: Related Article: Maddali L. N. Rao, Sk Shamim Islam|2021|Org.Lett.|23|3944|doi:10.1021/acs.orglett.1c01109
DOI: 10.5517/ccdc.csd.cc277r19
title: CCDC 2063020: Experimental Crystal Structure Determination

description: Related Article: Krishna Kaushik, Subrata Ghosh, Sujit Kamilya, Mathieu Rouzières, Sakshi Mehta, Abhishake Mondal|2021|Inorg.Chem.|60|7545|doi:10.1021/acs.inorgchem.1c01014
DOI: 10.5517/ccdc.csd.cc2790q9
title: CCDC 2064250: Experimental Crystal Structure Determination

description: Related Article: Xin Li, Jing Zhao, Wen-Jie Shi, Sha Bai, Ying-Feng Han|2021|Organometallics|40|1474|doi:10.1021/acs.organomet.1c00119
DOI: 10.5517/ccdc.csd.cc2790rb
title: CCDC 2064251: Experimental Crystal Structure Determination

description: Related Article: Xin Li, Jing Zhao, Wen-Jie Shi, Sha Bai, Ying-Feng Han|2021|Organometallics|40|1474|doi:10.1021/acs.organomet.1c00119
DOI: 10.5517/ccdc.csd.cc2790sc
title: CCDC 2064252: Experimental Crystal Structure Determination

description: Related Article: Xin Li, Jing Zhao, Wen-Jie Shi, Sha Bai, Ying-Feng Han|2021|Organometallics|40|1474|doi:10.1021/acs.organomet.1c00119
DOI: 10.5517/ccdc.csd.cc2790vf
title: CCDC 2064254: Experimental Crystal Structure Determination

description: Related Article: Xin Li, Jing Zhao, Wen-Jie Shi, Sha Bai, Ying-Feng Han|2021|Organometallics|40|1474|doi:10.1021/acs.organomet.1c00119
DOI: 10.5517/ccdc.csd.cc27hxvj
title: CCDC 2070888: Experimental Crystal Structure Determination

description: Related Article: Javier Ruiz, María A. Mateo|2021|Organometallics|40|1515|doi:10.1021/acs.organomet.1c00168
DOI: 10.5517/ccdc.csd.cc27hxwk
title: CCDC 2070889: Experimental Crystal Structure Determination

description: Related Article: Javier Ruiz, María A. Mateo|2021|Organometallics|40|1515|doi:10.1021/acs.organomet.1c00168
DOI: 10.5517/ccdc.csd.cc27hxxl
title: CCDC 2070890: Experimental Crystal Structure Determination

description: Related Article: Javier Ruiz, María A. Mateo|2021|Organometallics|40|1515|doi:10.1021/acs.organomet.1c00168
DOI: 10.6084/m9.figshare.14704983
title: Supplementary Material for: Predictive Factors in Sacral Neuromodulation: A Systematic Review

description: <b><i>Introduction:</i></b> Sacral neuromodulation (SNM) is an effective treatment in patients with overactive bladder syndrome or nonobstructive urinary retention when conservative treatment fails. Several factors that could impact outcome with SNM have been studied. This systematic review investigated these predictive factors and their relevance for clinical practice. <b><i>Methods:</i></b> Systematic review according to the PRISMA guidelines was conducted. This review is registered in the PROSPERO register (CRD42015016256). <b><i>Results:</i></b> Seventy-eight studies (of which 11 abstracts) were included. Females, younger patients, and a tined lead procedure tend to be predictive in successful SNM outcome. Factors that did not influence SNM outcome were prior back surgery, surgery for stress urinary incontinence, affective symptoms, and duration of complaints. Reduced detrusor contractility is associated with a lower success rate. The level of evidence of most studies (graded according to the Centre for Evidence-Based Medicine) was 3b. <b><i>Conclusion:</i></b> Even though this systematic review investigated predictive factors (gender, age, type of procedure, type of lead, and detrusor contractility), no general consensus on predictive factors could be made. Most studies are small, retrospective, and involve a heterogeneous population. Therefore, prospective research in larger specific patient groups remains necessary to find predictors of SNM outcome.
DOI: 10.6084/m9.figshare.14704983.v1
title: Supplementary Material for: Predictive Factors in Sacral Neuromodulation: A Systematic Review

description: <b><i>Introduction:</i></b> Sacral neuromodulation (SNM) is an effective treatment in patients with overactive bladder syndrome or nonobstructive urinary retention when conservative treatment fails. Several factors that could impact outcome with SNM have been studied. This systematic review investigated these predictive factors and their relevance for clinical practice. <b><i>Methods:</i></b> Systematic review according to the PRISMA guidelines was conducted. This review is registered in the PROSPERO register (CRD42015016256). <b><i>Results:</i></b> Seventy-eight studies (of which 11 abstracts) were included. Females, younger patients, and a tined lead procedure tend to be predictive in successful SNM outcome. Factors that did not influence SNM outcome were prior back surgery, surgery for stress urinary incontinence, affective symptoms, and duration of complaints. Reduced detrusor contractility is associated with a lower success rate. The level of evidence of most studies (graded according to the Centre for Evidence-Based Medicine) was 3b. <b><i>Conclusion:</i></b> Even though this systematic review investigated predictive factors (gender, age, type of procedure, type of lead, and detrusor contractility), no general consensus on predictive factors could be made. Most studies are small, retrospective, and involve a heterogeneous population. Therefore, prospective research in larger specific patient groups remains necessary to find predictors of SNM outcome.
DOI: 10.6084/m9.figshare.14564700.v3
title: Preclinical data sets on osteogenic nanofibrous coated implants

description: Anchoring of endosseous implant through osseointegration continues to be an important clinical need. Here, we describe the development of superior endosseous implant demonstrating enhance osseointegration, achieved through surface modification via coating of osteogenic nanofibres. The randomized bio-composite osteogenic nanofibres incorporating polycaprolactone, gelatin, hydroxyapatite, dexamethasone, beta-glycerophosphate and ascorbic acid were electrospun on titanium implants mimicking bone extracellular matrix and subsequently induced osteogenesis by targeting undifferentiated mesenchymal stem cells present in the peri-implant niche to regenerate osseous tissue. In proof-of-concept experiment on rabbit study models (n = 6), micro-computed tomography (Micro-CT), histomorphometric analysis and biomechanical testing in relation to our novel osteogenic nanofibrous coated implants showed improved results when compared to uncoated controls. Further, no pathological changes were detected during gross examination and necropsy on peri-implant osseous tissues regenerated in response to such coated implants. The findings of the present study confirm that osteogenic nanofibrous coating significantly increases the magnitude of osteogenesis in the peri-implant zone and favours the dynamics of osseointegration.
DOI: 10.6084/m9.figshare.14564700.v4
title: Preclinical data sets on osteogenic nanofibrous coated implants

description: Anchoring of endosseous implant through osseointegration continues to be an important clinical need. Here, we describe the development of superior endosseous implant demonstrating enhance osseointegration, achieved through surface modification via coating of osteogenic nanofibres. The randomized bio-composite osteogenic nanofibres incorporating polycaprolactone, gelatin, hydroxyapatite, dexamethasone, beta-glycerophosphate and ascorbic acid were electrospun on titanium implants mimicking bone extracellular matrix and subsequently induced osteogenesis by targeting undifferentiated mesenchymal stem cells present in the peri-implant niche to regenerate osseous tissue. In proof-of-concept experiment on rabbit study models (n = 6), micro-computed tomography (Micro-CT), histomorphometric analysis and biomechanical testing in relation to our novel osteogenic nanofibrous coated implants showed improved results when compared to uncoated controls. Further, no pathological changes were detected during gross examination and necropsy on peri-implant osseous tissues regenerated in response to such coated implants. The findings of the present study confirm that osteogenic nanofibrous coating significantly increases the magnitude of osteogenesis in the peri-implant zone and favours the dynamics of osseointegration.
DOI: 10.5281/zenodo.4876551
title: MGBC-29129: medium quality genomes

description: All 29,129 medium-quality genomes of the Mouse Gastrointestinal Bacteria Catalogue.
DOI: 10.5281/zenodo.4876550
title: MGBC-29129: medium quality genomes

description: All 29,129 medium-quality genomes of the Mouse Gastrointestinal Bacteria Catalogue.