cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3550206.v1
title: Supplement 1. Data matrices and source codes of the software used in the paper.

description: File List Matrices.txt SourceCodes.txt Description Matrices.txt contains raw data and references to 185 real abundance matrices used in the present paper. SourceCodes.txt consists of source code of Matrix.exe and CoOcurrence.exe.
DOI: 10.3535/t7h-rge-584
title: †Holorhynchus giganteus Kiaer, 1902

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/44g-6jy-9vv
title: Sphaerochitina sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5hn-ntr-24s
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14595483.v2
title: Comparative analysis of sponge microbiomes and host immune repertoire

description: Comparative analysis of sponge microbiome diversity (data from Sponge Microbiome Project) and immune repertoire (data from various sources)
DOI: 10.6084/m9.figshare.28023422.v2
title: Data Figures

description: Data for related figures and supplementary information
DOI: 10.3535/dt6-s4v-0pt
title: Conochitina n. sp H

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mw3-s6l-sqf
title: Conochitina sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22714579.v1
title: ExtData_Figure_7_qPCR

description: <em>(B) Testing of luciferase reporters with sequence insertions in the introns, as shown in diagram in A. HEK293T ishXrn1 cells were treated with doxycycline for 3-4 days to induce knock down of Xrn1, then transfected with luciferase reporters containing the 99 bp insertions in </em>STOML2 or YKT6 <em>either in an exon or an intron, with or without PR8 PA-X. RNA was extracted and luciferase mRNA levels were quantified by qRT-PCR and normalized to 18S. Two sets of luciferase primers were used - either both annealing to exons or one to exon and one to intron, to measure levels of the processed mRNA and unspliced pre-mRNA, respectively.</em>
DOI: 10.17632/tckvm6hcwd
title: SHansen_SusceptibilityOfAdultPhlyctinus_Suppl.Material1

description: Susceptibility of Phlyctinus callosus and P. xerophilus to the entomopathogenic nematodes Steinernema yirgalemense and Heterorhabditis indica in virulence screenings.
DOI: 10.3535/8re-phs-6kg
title: †Subulites Emmons, 1842

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wv2-jp3-frf
title: Bos taurus primigenius Bojanus, 1827

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26684217.v1
title: Additional file 1 of Biochar improves the nutrient cycle in sandy-textured soils and increases crop yield: a systematic review

description: Additional file 1. ROSES systematic review report.
DOI: 10.6084/m9.figshare.28703135.v1
title: 1jailbreak

description: none
DOI: 10.6084/m9.figshare.4765282.v1
title: Phase distortion- Software.rar

description: The software associated with the article "Filter based phase distortions in extracellular spikes"
DOI: 10.3535/c54-k0j-rp9
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/n36-peh-3q1
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1468419.v1
title: Plasmid sequences - New cassettes for single-step drug-resistance and prototrophic marker switching in fission yeast

description: Supporting Online Material (plasmid DNA sequences) accompanying Lorenz (2015) New cassettes for single-step drug-resistance and prototrophic marker switching in fission yeast. - Yeast 32 (12): 703-710<br>
DOI: 10.6084/m9.figshare.27935052.v1
title: <b>Supplementary Table 1.</b> QTL regions for each of these three sets of phenotypes from the QTL database

description: The application of Genomic Selection (GS) in beef cattle breeding programs is somewhat limited, despite its numerous advantages. Computer simulations are powerful tools to enhance our understanding of GS applications across different scenarios and are invaluable as an initial step before implementing this technique in "real" breeding programs. In this study, we utilized real SNP data from Indicus and Taurus breeds to simulate three crossbred breeding schemes: F1 crosses, grading up, and rotational crosses. Phenotypes were selected for shear force, growth, and tolerance traits. We compared the predictive accuracy of three 50k SNP chips that differed in SNP selection methodologies: random selection, selection based on minimum allele frequency differences between breeds, and selection based on minimum allele frequency differences between breeds with a threshold of 0.09 in Taurus. Our findings indicate that rotational crossing demonstrates optimal predictive accuracy, while selecting markers based on allele frequency differences between breeds does not yield significant benefits and may even be detrimental.
DOI: 10.3535/mfh-9e6-5yb
title: †Orthis Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rpe-6bs-cpw
title: Cingulochitina baltica?

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14222834.v1
title: µCT data for Correlophus ciliatus tail 143739

description: Raw µCT data.
DOI: 10.6084/m9.figshare.23733966.v1
title: Effects of microbial agent and microbial fertilizer input on soil microbial community structure and diversity in a peanut continuous cropping system metagenomics of soil microbiome.zip

description: The data is comprised of the peanut rhizosphere soil microbiome. The microbial community dynamics and population are influenced by the microbial agent and microbial fertilizer and their input on soil microbial community structure and diversity in a peanut continuous cropping system.
DOI: 10.3535/c9m-z5g-z9x
title: Sphalerite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/w1z-lgy-4dy
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5116543.v1
title: KEDU_AP_1.fq.gz

description: We collected the aboveground parts of cold-tolerant variety ‘Pingtang 1’and subjected them to high-throughput sequencing.
DOI: 10.6084/m9.figshare.5259157.v2
title: Description of the skeleton of the fossil beaked whale Messapicetus gregarius: searching potential proxies for deep-diving abilities

description: Ziphiidae (beaked whales) are a successful family of medium- to large-sized toothed whales. Their extant members perform regular deep dives beyond the photic zone to forage for cephalopods and fish. Conversely, extinct long-snouted stem ziphiids are interpreted as epipelagic predators. However, some aspects of this hypothesis remain unclear due to the lack of clear morphological proxies for recognizing regular deep divers. We compared the forelimb, neck, and pterygoid sinus system of the fossil ziphiid <i>Messapicetus gregarius </i>with those of other extant odontocetes to evaluate the potential of these body regions as proxies to assess deep-diving specialization. The reconstructed musculture of the neck and forelimb of <i>M. gregarius</i> was compared with that of other odontocetes. We also quantified variation in the proportions of the forelimb and the hamular fossa of the pterygoid sinus (HF) using 16 linear measurements. The degree of association between diving behavior in extant odontocetes and these measurements was evaluated with and without phylogenetic correction.Reconstruction of the neck musculature suggests that <i>M. gregarius </i>possessed a neck more flexible than most extant ziphiids due to the lower degree of fusion of the cervical vertebrae and the large insertions for the M. longus colli and Mm. intertransversarii ventrales cervicis. While neck rigidity might be related to deep diving, differences in neck flexibility among extant ziphiids indicates a more complex functional interpretation. The relationship between forelimb morphology and diving behavior was not significant both with and without phylogenetic correction, suggesting that it cannot be used to assess deep-diving abilities with the parameters considered. Measurements of the HF revealed successful to evaluate deep-diving abilities in odontocetes, with an enlargement of this structure in deep divers. Considering other evidences that suggest an epipelagic behaviour, we propose different scenarios to explain the observation of an enlarged HF in <i>M. gregarius</i>: (1) this species may have fed at different depths; (2) it performed deep dives to avoid potential predators; or (3) the enlarged HF and deep-diving habitat correspond to an ancestral condition, with <i>M. gregarius</i> returning to a more epipelagic habitat.
DOI: 10.34740/kaggle/dsv/11235349
title: Sri Lanka Monthly Passenger Data (2012-2018)
DOI: 10.3535/c2t-ha8-kye
title: Quartz

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/lrn-7rp-p6b
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20357901.v1
title: Final Survey Raw Data.xlsx

description: Final survey data collected at the end of the ARUK pilot mentoring scheme 2021
DOI: 10.6084/m9.figshare.24968358.v1
title: Urinary steroid hormone profiles for wild greater spear-nosed bats

description: The 117 urine profile samples came from 59 different females and 44 males. Four females and seven males were sampled more than once. Steroid hormones and their metabolites were measured from dried urine by ZRT labs using gas chromatography-triple quadrupole mass spectrometry (GC-MS/MS) following (Xu et al., 2017). Briefly, samples were extracted from filter paper strips (1/3 of a 903<sup>TM</sup> sample collection card supplied by ZRT labs and made by Eastern Business Forms, Greenville, SC) using both water and methanol and cleaned using C18-solid phase extraction cartridges. The eluents were dried down and enzymatically hydrolyzed. The liquid extracts of the hydrolysis mixture were also dried down and derivatized to trimethylsilyl ethers using MSTFA:NH4I:ethanethiol. A 2 µl volume of product was injected into an Agilent 7890 Triple Quadropole Mass Spectrometer and results were analyzed using MassHunter software, v.12. We corrected for potential differences in hormone levels caused by variation in the water content of urine by measuring and then adjusting for specific gravity (SG).
DOI: 10.6084/m9.figshare.28502417.v1
title: Single-cell RNA-seq of Oncorhynchus masou masou brain, kidney, liver, and muscle tissue

description: We used single-cell sequencing to study the gene expression and transcriptional status of brain, liver, kidney, and muscle in Oncorhynchus masou masou.
DOI: 10.3535/2s5-xj3-8zh
title: †Phymatopleuridae Batten, 1956

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/hhw-5la-468
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.6148844.v1
title: Temperature measurements of railway structures - Estrada de Ferro Carajás - Brazil

description: Measurement sheet: We measured the temperature of seven predetermined sites of or nearby Estrada de Ferro Carajás (Carajás railway): water pond, road access, track ballast, rail and three different types of sleepers (concrete, steel and wooden) in the base coordinates -4.309770, -46.58104, municipality of Bom Jesus das Selvas, Maranhão state. All measured structures were within a maximum radius of 20 meters of the base coordinate. We pointed an infrared thermometer Minipa MT-320 (Minipa, São Paulo, Brazil) directly downward, 70 cm high from the target. The metering covered a diameter of 5.83 cm, size sufficient to limit interference from the surroundings. The measurements were carried out in three days, at intervals of 4 h, between 6 and 22 h. Due to staff safety issues, the dawn period was not sampled. In each hour, three temperature measurements were taken per structure, with a 15-second interval between each metering of the same structure.<br>Inmet_Buriticupu sheet: Meteorological data were gathered from Inmet website (www.inmet.gov.br), from Buriticupu automatic station (coordinates: -4.320597, -46.449503). We filtered the data in order to comprise only the dates that we made track measurements.
DOI: 10.3535/pjm-fw3-mnl
title: Cephalopoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14304624.v1
title: Mapping countries in Global Value Chains: An analysis of trade and Intellectual property income flows

description: Abstract This article aims at mapping the countries participation in Global Value Chains (CGV) simultaneously to the behavior of trade flows and income for the use of intellectual property, in a pioneering empirical approach in the literature regarding value chains involving technological variables. For this, it were analyzed the countries participation in value chains and the pattern of variation of trade flows and income for the use of intellectual property. The mapping was done with 41 countries between 1995 and 2011, using five indicators that captured characteristics inherent to participation in this process. Given the amount of information, clusters analysis was used, identifying that the countries which increased their participation in global chains generally presented worsening in intellectual property income account usually accompanied by improvement in trade account. The result obtained with the methodology converges with the recent discussion of greater participation of the developing countries in CGV to be accompanied by greater external technological dependence.
DOI: 10.6084/m9.figshare.16778818.v6
title: Dataset_for_SE.xlsx

description: This dataset is for the paper "Estimation of fluid salinity using coseismic electric signal generated by an earthquake". The code relating to forward modeling in this paper is accessible from https://pan.baidu.com/s/1ZJiGeFqO7OG9VNk60PJugA. We also offer the basic information on the code in README.md.<br>Researchers who want to do academic corporations with our group can email us and we would like to grant them the credential to access the code.Corresponding authors:Yunhe Liu, liuyunhe@jlu.edu.cnYongxin Gao, yongxin_gao@foxmail.com<br>
DOI: 10.6084/m9.figshare.25769004.v1
title: <b>Two-Station Lg Wave Attenuation Tomography in Eastern Asia</b>

description: We conduct detailed tomographic mappings of the Lg <i>Q</i> structure across Eastern Asia in a frequency range from 0.5 to 4.0Hz.
DOI: 10.6084/m9.figshare.3566364.v1
title: Appendix C. Untransformed and transformed scatterplot matrices summarizing bivariate relationships among tree-level structural variables used in principal components analysis.

description: Untransformed and transformed scatterplot matrices summarizing bivariate relationships among tree-level structural variables used in principal components analysis.
DOI: 10.6084/m9.figshare.c.3735427_d6.v1
title: Additional file 6: of Quantitative evaluation and reversion analysis of the attractor landscapes of an intracellular regulatory network for colorectal cancer

description: The molecular profiles of CMS cancer cells, statistical significance analysis of reversion targets, and synergistic effect analysis of every two nodes inhibition. (XLSX 67Â kb)
DOI: 10.3535/jkx-ra8-tdk
title: Pseudoasaphus globifrons Eichwald

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/mtt-wy6-7dk
title: †Endoceras J. Hall, 1847

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.16834510.v1
title: August 2021 Covid-19 + Vaccines Twitter Streaming Dataset

description: The file contains Tweet IDs* for COVID-19 related tweets containing at least one vaccine-related word (i.e., words that starts with vaccin*, vacin*, or vax*) collected in August, 2021 from Twitter's COVID-19 Streaming Endpoint via a custom script developed by the Social Media Lab (https://socialmedialab.ca/). Visit our interactive dashboard at https://stream.covid19misinfo.org/ for a preview and some general stats about this COVID-19 Twitter streaming dataset. For more info about Twitter's COVID-19 Streaming Endpoint, visit https://developer.twitter.com/en/docs/labs/covid19-stream/overview * Note: In accordance with Twitter API Terms, the dataset only includes Tweet IDs (as opposed to the actual tweets and associated metadata). To recollect tweets contained in this dataset, you can use programs such Communalytic (https://communalytic.com/), Hydrator (https://github.com/DocNow/hydrator/) or the Python library Twarc (https://github.com/DocNow/twarc/).
DOI: 10.3535/ft1-w23-glm
title: †Orthoceras Bruguière, 1789

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qpx-z4e-a0y
title: †Nicholsonella Ulrich, 1890

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25911529.v1
title: OTC_Sales_Dataset.xlsx

description: <b>Over-the-counter Sales </b><b>o</b><b>f Antimicrobials </b><b>a</b><b>nd Contributing Factors </b><b>a</b><b>mong Private Pharmacies</b>
DOI: 10.3535/kkg-dvw-vyz
title: Mollusca

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qyb-9p5-kpe
title: †Nicholsonella Ulrich, 1890

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28311773.v1
title: Northern Nigeria Client Exit Interviews (2020)

description: This database presents results from a round of client exit interviews (CEIs) conducted in A360 supported facilities in northern Nigeria in August 2020. The table below presents details from the protocol for the CEIs. Variable definitions are presented in a separate document upload. <br>Northern Nigeria (MMA)<b>Population</b>Married adolescent girls aged 15-19 receiving contraceptive service delivery through MMA<b>Location</b>Four LGAs in Kaduna and Nasarawa states in northern Nigeria<b>Sample</b>n=428<b>Recruitment procedure</b>10 clients who attended Life, Family and Health (LFH) MMA classes were systematically selected from a list of all girls who saw a health provider for contraceptive counselling and services on a given day. Overall, forty LFH (40) classes from selected facilities contributed to the sample.<b>Survey tool</b>Interviewer-administered survey tool inbuilt on Survey CTO and hosted in password-protected mobile devices (tablets) owned by SFH in Nigeria was fielded by trained enumerators. Data were submitted to a secure server daily and data downloaded and analyzed using STATA 16.0.<b>Consent</b>Obtained informed consent (girls aged 18+) or assent with waiver of parental or guardian consent (girls under 18 years of age).<b>Interview procedure</b>Consenting married adolescent girls are interviewed immediately before they leave a participating facility where MMA is offered.
DOI: 10.6084/m9.figshare.5862474.v1
title: Spatial temporal analysis of mortality by suicide among the elderly in Brazil

description: Abstract Objective: to perform spatiotemporal analysis of suicide mortality in the elderly in Brazil. Methods: a mixed ecological study was carried out in which deaths from suicide among the elderly were analyzed using data from the Mortality Information System (MIS) and socio-demographic variables, from 2000 to 2014, with a trend analysis of this period. Univariate and bivariate spatial analysis was performed using the Moran Global and Moran Map index to evaluate the intensity and significance of spatial clusters. Results: there were 19,806 deaths due to suicide among the elderly in Brazil between 2000 and 2014. The ratio of male and female mortality rates was 4:1, with increasing trends for both genders (R2&gt;0.8), but with greater intensity among men (p=0.0293). There was a moderate autocorrelation for men (I&gt;0.40), with clusters forming for both genders in the south of Brazil. Bivariate analysis showed the formation of clusters in the southern region with the Human Development Index and aging variables and in the north and northeast regions based on dependence and illiteracy ratio. Conclusions: mortality due to suicide among the elderly has a tendency to increase and is unequally distributed in Brazil.
DOI: 10.17632/hy2vkn2v7z
title: Experimental characterization and modelling of bisphenol-a type epoxy polymer in high strain rates and low temperatures

description: Raw Data for the paper 'Experimental characterization and modelling of bisphenol-a type epoxy polymer in high strain rates and low temperatures'
DOI: 10.3535/7w1-mst-r1l
title: †Orthis Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/x0g-vg2-ctv
title: Illaenus

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.7670435.v1
title: Global distribution of Clanwilliam cedar tree localities in 2013

description: This dataset accompanies the publication "Slingsby, J.A. and Slingsby, P.W.O. 2019. Monitoring the critically endangered Clanwilliam cedar with freely available Google Earth imagery. PeerJ" Please read the paper for details and cite it as the source.<br>The All_Cedars_2_WGS84.kml dataset contains 13419 cedar tree localities that were mapped from the 2013 Google Earth imagery for the map "Slingsby, P., 2015. Hike the Cederberg Map, 2nd Edition." and used to test the utility of this method for monitoring the species. Note that trees with canopies &lt;4m<sup>2</sup> were not detectable (see paper for details). The data are mapped at a scale of 1:24 000 (20m horizontal mapping accuracy) and are available in Keyhole Markup Language (KML) format, unprojected, readily openable in Google Earth.<br>"fieldtrees.gpkg" is a GeoPackage format file containing unprojected tree localities that were mapped in the field and includes tree health and size data.<br><br>
DOI: 10.3535/vnq-l5w-h7t
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y6l-3l5-v26
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1136081_d199
title: Ex10R55 DAPI-1 from Synaptic molecular imaging in spared and deprived columns of mouse barrel cortex with array tomography.

description: This data represents repeated immunohistochemical staining and stripping (elution) cycles of an array tomography tissue ribbon from mouse barrel cortex following chessboard deprivation. Included are images from consecutive 70 nm serial sections aligned to produce a high-resolution volumetric reconstruction of a given antibody stain.