cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.w2ashy
title: Occurrence Download

description: A dataset containing 110437 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Steatoda",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 110437 records from 602 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072143-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18141635
title: Archäogenetik und Bevölkerungsentwicklung im fränkischen Raum

description: Unter archäogenetischer Perspektive ergibt sich für den fränkischen Raum - in der Zeit zwischen 1000 vor und 1000 nach Christus - kein Bild klarer demographischer Brüche, sondern eines langfristiger biologischer Kontinuität bei wechselnden kulturellen und politischen Ordnungen – unter Vorbehalt der Datenlage und ihrer künftigen Revision.

Dieser Artikel versucht einen orientierenden Überblick zu vermitteln.
DOI: 10.5281/zenodo.18141634
title: Archäogenetik und Bevölkerungsentwicklung im fränkischen Raum

description: Unter archäogenetischer Perspektive ergibt sich für den fränkischen Raum - in der Zeit zwischen 1000 vor und 1000 nach Christus - kein Bild klarer demographischer Brüche, sondern eines langfristiger biologischer Kontinuität bei wechselnden kulturellen und politischen Ordnungen – unter Vorbehalt der Datenlage und ihrer künftigen Revision.

Dieser Artikel versucht einen orientierenden Überblick zu vermitteln.
DOI: 10.6084/m9.figshare.28574105.v2
title: Predicting climate-driven habitat loss in highly trafficked lizards: the role of dispersal limitations and protected areas

description: Data and R scripts to reproduce the research: "Predicting climate-driven habitat loss in highly trafficked lizards: the role of dispersal limitations and protected areas" focus on assessing climate-driven changes in suitable conditions for bluetongue lizards to 2100 under multiple climate scenarios and evaluate the effectiveness of protected areas in mitigating these impacts.
DOI: 10.17603/ds2-tr5f-ws40
title: Low-Cost Pressure Sensors for Measuring Storm Surge and Waves

description: This project is related to the development and use of low-cost, do-it-yourself (DIY) commercial electronic sensors for measuring storm surge and waves in coastal areas. The original purpose of the project was to build and deploy large numbers of pressure sensors capable of sampling at frequencies high enough to characterize wind- and vessel-generated waves in relatively shallow water (<5 meters). While commercially available wave gauges are widely available, robust, reliable, and relatively easy to use, their cost can often be prohibitive. This project provides an alternative to commercially available pressure sensors for the purpose of measuring tides, storm surge, and/or waves in coastal waters. The material cost for each gauge is approximately $200 and the time for construction is nominally 45-60 minutes per gauge (with experience). We have assessed the performance of these low-cost, DIY gauges in a controlled laboratory setting as well as in the field. When compared with commercially available wave gauges and/or water level sensors, we find that the low-cost DIY gauges provide statistically similar results at approximately 10% of the cost of their counterparts.
DOI: 10.15468/dl.3tavmw
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is El Salvador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sedum"
 ]
}

 The dataset includes 23 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072146-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ujfxr5
title: Occurrence Download

description: A dataset containing 177 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "PublishingOrg is c8d737e0-2ff8-42e8-b8fc-6b805d26fc5f",
 "TaxonKey is Anechura bipunctata"
 ]
}

 The dataset includes 177 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072147-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18141480
title: plan de masse
DOI: 10.5281/zenodo.18141479
title: plan de masse
DOI: 10.34740/kaggle/ds/9183578
title: DSA spaced repetition
DOI: 10.6084/m9.figshare.30983515.v1
title: Data for submitted manuscript <i>Characterizing bee (Hymenoptera: Apoidea: Anthophila) roadkill across Texas, United States of America </i>by James L. Tracy, Shelby K. Kilpatrick, Karen Wright, Elise V. Voltura, Anna-Capri Perez, Jasper Klein, Adrienne Brundage, and Robert Coulson

description: ABSTRACT1. Roadkill is an often unrecognized significant contributor to bee pollinator decline. Additional surveys can further reveal how roadkill impacts bee populations, especially for declining species.2. We conducted 100 m roadside transect surveys across Texas, USA during spring and autumn 2020 and spring 2021, identifying roadkill bees to the lowest feasible taxon to map roadkill distribution and hotspots and estimate regional roadkill and community metrics.3. We also compared our results with data newly extracted from other bee roadkill studies, including a Utah vehicle-mounted sticky trap survey and a Tennessee year-round roadside transect study. We correlated and compared bee genera median body lengths and their relative abundance among Texas and Utah bee roadkill surveys and iNaturalist occurrence data. 4. Roadkill was extremely highly skewed towards hotspots. Approximately 4.6–11.6 million bees were killed on Texas roads in 2020, based on boot strapped accelerated bias-corrected 95% CI. These included mean estimates of 336,213 Bombus pensylvanicus and 45,847 B. sonorus, both species of conservation concern. Non-lethal roadside transect methods commonly detected larger-bodied Bombus and Xylocopa bees absent in lethal Utah vehicle-mounted sticky trap surveys. Conversely, Utah sticky trap surveys detected abundant smaller-sized Perdita and Lasioglossum bees that were rare or absent from roadside transect studies.5. Roadkill hotspots for bees of conservation concern can be better identified through combining multi-seasonal roadside transect replicates with data from vehicle-mounted foam-backed sticky traps or non-lethal vehicular bee sweepers. Accounting for the adjacent habitat and bee community can facilitate identifying and mitigating bee roadkill susceptibility.<br>
DOI: 10.5281/zenodo.18135201
title: Labeled Synthetic Crystal Material Dataset

description: Overview

The LSCM (Labeled Synthetic Crystal Materials) dataset contains crystal structures generated by CrystaLLM code and labeled with seven pre-trained foundation models. There are a total of 7,889 distinct synthetic crystalline structures in the database. The uniqueness of each structure, i.e., whether it is a known structure or exists in the training dataset for CrystaLLM, has not been checked against. The database is an ASE database in SQLite3 format. For details on how to read the database using ASE, refer to the ASE documentation. Each structure produced by CrystaLLM is validated for spacegroup symmetry compliance and relaxed using symmetry-constrained optimization for a given pre-trained foundation model. The database labels include energy, forces, and stress provided by the foundation model.

Reading the Database with ASE



from ase.db import connect
db = connect('LSCM_Relaxed_10July2025.db')



Foundation Models




Calculator
Engine (Model Checkpoint)
Description


Orb
v3-conservative-inf-omat
ORB v3 conservative model with infinite cutoff


sevenn
7net-mf-ompa
evenNet MF OMPA variant


mace
mace-mpa-0
MACE MPA-0 model


mattersim
v1-5m
MatterSim v1 (5M parameters)


deepmd
dpa-3.1-3m-ft
DPA-3.1, 3M parameters, finetuned


eqnorm
mptrj
Equivariant Normalizing Flow model (MPTraj variant)


grace
2l-oam
GRACE 2-layer OAM




 

To view the respective calculator and model details, check matbench discovery project page or references.

 



DisclaimerThis dataset was generated using the author’s personal computing resources and during independent research activities conducted completly outside or prior to the scope of any employment or institutional affiliation. The dataset and any associated analyses here have not been peer-reviewed. Availability of this material does not imply accuracy, completeness, validation, or fitness for any particular purpose.
description: Workflow





Crystal structures are generated using CrystaLLM repo with the steps:



Chemistry sampling: Unary, binary, ternary, quaternary, and quinary compositions

Spacegroup sampling: 230 spacegroups sampled during generation

Output format: CIF format (validated for spacegroup symmetry compliance)



All structures underwent symmetry-constrained optimization within ASE using each foundation model





Constraint: FixSymmetry and UnitCellFilter

Optimizer: BFGS

Convergence: Maximum force threshold of 0.05 eV/Å

Symmetry tolerance: 1.0×10⁻⁴ Å

Validation: Symmetry loss during relaxation$\rightarrow$reject
description:  Brief Dataset Statistics




Total entries: 53,749

Unique structures: 7,889

Unary (1 element): 67 structures

Binary (2 elements): 4,344 structures

Ternary (3 elements): 2,847 structures

Quaternary (4 elements): 591 structures

Quinary (5 elements): 40 structures


Elements



Element structure distribution


Spacegroups

Spacegroup distribution
DOI: 10.5281/zenodo.18135200
title: Labeled Synthetic Crystal Material Dataset

description: Overview

The LSCM (Labeled Synthetic Crystal Materials) dataset contains crystal structures generated by CrystaLLM code and labeled with seven pre-trained foundation models. There are a total of 7,889 distinct synthetic crystalline structures in the database. The uniqueness of each structure, i.e., whether it is a known structure or exists in the training dataset for CrystaLLM, has not been checked against. The database is an ASE database in SQLite3 format. For details on how to read the database using ASE, refer to the ASE documentation. Each structure produced by CrystaLLM is validated for spacegroup symmetry compliance and relaxed using symmetry-constrained optimization for a given pre-trained foundation model. The database labels include energy, forces, and stress provided by the foundation model.

Reading the Database with ASE



from ase.db import connect
db = connect('LSCM_Relaxed_10July2025.db')



Foundation Models




Calculator
Engine (Model Checkpoint)
Description


Orb
v3-conservative-inf-omat
ORB v3 conservative model with infinite cutoff


sevenn
7net-mf-ompa
evenNet MF OMPA variant


mace
mace-mpa-0
MACE MPA-0 model


mattersim
v1-5m
MatterSim v1 (5M parameters)


deepmd
dpa-3.1-3m-ft
DPA-3.1, 3M parameters, finetuned


eqnorm
mptrj
Equivariant Normalizing Flow model (MPTraj variant)


grace
2l-oam
GRACE 2-layer OAM




 

To view the respective calculator and model details, check matbench discovery project page or references.

 



DisclaimerThis dataset was generated using the author’s personal computing resources and during independent research activities conducted completly outside or prior to the scope of any employment or institutional affiliation. The dataset and any associated analyses here have not been peer-reviewed. Availability of this material does not imply accuracy, completeness, validation, or fitness for any particular purpose.
description: Workflow





Crystal structures are generated using CrystaLLM repo with the steps:



Chemistry sampling: Unary, binary, ternary, quaternary, and quinary compositions

Spacegroup sampling: 230 spacegroups sampled during generation

Output format: CIF format (validated for spacegroup symmetry compliance)



All structures underwent symmetry-constrained optimization within ASE using each foundation model





Constraint: FixSymmetry and UnitCellFilter

Optimizer: BFGS

Convergence: Maximum force threshold of 0.05 eV/Å

Symmetry tolerance: 1.0×10⁻⁴ Å

Validation: Symmetry loss during relaxation$\rightarrow$reject
description:  Brief Dataset Statistics




Total entries: 53,749

Unique structures: 7,889

Unary (1 element): 67 structures

Binary (2 elements): 4,344 structures

Ternary (3 elements): 2,847 structures

Quaternary (4 elements): 591 structures

Quinary (5 elements): 40 structures


Elements



Element structure distribution


Spacegroups

Spacegroup distribution
DOI: 10.15468/dl.6mcqht
title: Occurrence Download

description: A dataset containing 7546 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Sorghum bicolor",
 "Year 1995-2025"
 ]
}

 The dataset includes 7546 records from 349 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072149-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dw4umr
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "TaxonKey is Trypocopris vernalis"
 ]
}

 The dataset includes 59 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072150-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18141707
title: 14-the-orchard-that-dreamed-of-fire covers B-C
DOI: 10.5281/zenodo.18141708
title: 14-the-orchard-that-dreamed-of-fire covers B-C
DOI: 10.34740/kaggle/dsv/14384583
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.mmjquk
title: Occurrence Download

description: A dataset containing 74 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Iran (Islamic Republic of)",
 "License is one of (CC0 1.0, CC-BY 4.0, CC-BY-NC 4.0)",
 "OccurrenceStatus is Present",
 "TaxonKey is Otis tarda"
 ]
}

 The dataset includes 74 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072151-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wt26vw
title: Occurrence Download

description: A dataset containing 3478 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-80.26922 -3.34239,-80.21281 -3.51645,-80.17178 -3.80816,-80.05896 -3.89003,-80.24358 -3.95143,-80.52564 -4.05886,-80.31537 -4.17139,-80.45384 -4.33505,-80.22306 -4.40152,-79.9769 -4.37596,-79.81792 -4.50889,-79.63843 -4.45265,-79.4333 -3.98212,-79.45894 -3.75699,-79.42304 -3.39359,-79.89998 -3.03005,-79.941 -3.25536,-80.26922 -3.34239))",
 "HasGeospatialIssue is false",
 "TaxonKey is Sicalis flaveola"
 ]
}

 The dataset includes 3478 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072152-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xvar73
title: Occurrence Download

description: A dataset containing 167476 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Barbatula barbatula",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2016",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 167476 records from 152 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072145-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14384612
title: Balochi Language to English Translation Dataset
DOI: 10.15468/dl.fr4e3p
title: Occurrence Download

description: A dataset containing 7799 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Barbatula barbatula",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2022",
 "Year is less than or equal to 2026"
 ]
}

 The dataset includes 7799 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072154-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ff7ay6
title: Occurrence Download

description: A dataset containing 1275174 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Iran (Islamic Republic of)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1275174 records from 1729 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072148-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.acdx2n
title: Occurrence Download

description: A dataset containing 9689 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hyracoidea"
 ]
}

 The dataset includes 9689 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180425-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hz3tpw
title: Occurrence Download

description: A dataset containing 483 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Picea brachytyla (Franch.) E.Pritz."
 ]
}

 The dataset includes 483 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086673-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.39cvpz
title: Occurrence Download

description: A dataset containing 864 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((77.80905 27.29828,74.29343 -2.54283,107.3403 -14.34454,154.80124 -25.5576,169.2153 -0.43428,124.56687 39.03173,84.8403 32.17998,77.80905 27.29828))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Taenitis blechnoides (Willd.) Sw."
 ]
}

 The dataset includes 864 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119701-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.27h5pr
title: Occurrence Download

description: A dataset containing 389 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cochoa purpurea Hodgson, 1836"
 ]
}

 The dataset includes 389 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012533-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t5nxgs
title: Occurrence Download

description: A dataset containing 24940 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tapirira Aubl."
 ]
}

 The dataset includes 24940 records from 370 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0199135-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6twp3p
title: Occurrence Download

description: A dataset containing 820 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-71.72424 7.03309,-71.4386 7.78481,-72.10876 8.6221,-73.00964 8.05685,-73.22937 7.3056,-72.70203 6.83678,-71.72424 7.03309))",
 "HasGeospatialIssue is false",
 "TaxonKey is Actinopterygii"
 ]
}

 The dataset includes 820 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119699-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2qrrv8
title: Occurrence Download

description: A dataset listing the 13 species recorded in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-113.3 32.5,-111.04 32.5,-111.04 34.04,-113.3 34.04,-113.3 32.5))",
 "TaxonKey is Chiroptera"
 ]
}

 The dataset's 13 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0199139-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.77rh3e
title: Occurrence Download

description: A dataset containing 85344 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mikania Willd."
 ]
}

 The dataset includes 85344 records from 607 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086675-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4t7adl
title: Occurrence Download

description: A dataset containing 9840 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amaranthus viridis L."
 ]
}

 The dataset includes 9840 records from 342 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013198-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e4rebb
title: Occurrence Download

description: A dataset containing 325 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-92.92209 16.10242,-91.58942 16.10242,-91.58942 17.40563,-92.92209 17.40563,-92.92209 16.10242))",
 "OccurrenceStatus is Present",
 "TaxonKey is Desmodus rotundus (E.Geoffroy, 1810)",
 "Year 1000-2021"
 ]
}

 The dataset includes 325 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027497-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9pc528
title: Occurrence Download

description: A dataset containing 2857 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Fossil"
 ]
 },
 "TaxonKey is Nyctereutes procyonoides (Gray, 1834)"
 ]
}

 The dataset includes 2857 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027492-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.