cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12789383.v1
title: Tetraploid vcf

description: In total 380 potato clones were genotyped. Library construction and genotyping by genotyping by sequencing (GBS) was outsourced to the Genomics Facility at Cornell University in 2015. The DNA was digested with EcoT221 restriction enzyme and the libraries were 48x multiplexed for sequencing. For polyploid calling the raw FASTQ files were processed with Stacks (Catchen et al., 2013) to remove the barcodes and with TrimGalore https://github.com/FelixKrueger/TrimGalore to trim the ends of reads. The reads were aligned to the reference genome version <i>S. tuberosum_448_v4.03</i> (Sharma et al., 2013) using BWA (Li and Durbin, 2009) and the resulting SAM files were converted to BAM files using Samtools (Li et al., 2009). The variants were called using GATK HaplotypeCaller option (Poplin et al., 2017), disabling the duplicate read filter (this is recommended for GBS data) and joint genotyping using the -ERC GVCF mode.
DOI: 10.6084/m9.figshare.12797498.v1
title: 2D chiral perovskite

description: Data location: https://materials.hybrid3.duke.edu/materials/dataset/1634
DOI: 10.6084/m9.figshare.13801304.v1
title: PDB-wide identification of physiological hetero-oligomeric assemblies based on conserved quaternary structure geometry

description: BU_zipped contains 577 PDB coordinate files of the manually curated benchmark dataset.Supplementary_excel contains the list of the benchmark with descriptions in a tabulated file.
DOI: 10.6084/m9.figshare.14832711.v2
title: Australian EEG Data Processing

description: Preprocessing of Australian EEG data in BVA<br>
DOI: 10.6084/m9.figshare.28184519.v1
title: Diabetes dataset

description: This dataset is published for research related to diabetes disease classification
DOI: 10.17632/kz852x4xnh
title: Replication_Package of "Deviation signs-based bunching methods"

description: This package contains Stata Codes of Deviation signs-based bunching methods
DOI: 10.6084/m9.figshare.12552134.v1
title: Mass Estimate Calculation Spreadsheet

description: Spreadsheet with all measured GDI values plus calculations to estimate volume and mass for the dinosaurs <i>Tyrannosaurus</i>, <i>Giganotosaurus</i>, and <i>Dreadnoughtus</i>.
DOI: 10.6084/m9.figshare.14151930.v1
title: Supplementary data from Visuomotor control of leaping over a raised obstacle is sensitive to small baseline displacements

description: The limb kinematics used for stepping or leaping over an obstacle are determined primarily by visual sensing of obstacle position and geometry. In this study, we demonstrate that changes are induced in limb kinematics even when obstacle geometry is manipulated in a way that does not introduce a mechanical requirement for a change of limb trajectory nor increase risk of collision. Human participants performed a running leap over a single raised obstacle bar. Kinematic changes were measured when an identical second bar was introduced at a ground level underneath the obstacle and displaced by a functionally insignificant distance along the axis of travel. The presence or absence of a baseline directly beneath the highest extremity had no significant effect on limb kinematics. However, displacing the baseline horizontally induced a horizontal translation of limb trajectory in the direction of the displacement. These results show that systematic changes to limb trajectories can occur in the absence of a change in sensed mechanical constraints or optimization. The nature of visuomotor control of human leaping may involve a continuous mapping of sensory input to kinematic output rather than one responsive only to information perceived to be mechanically relevant.
DOI: 10.6084/m9.figshare.14751624.v1
title: Phalloidin Staining of RFP-Lenti MDA-MB-231 GFP-actin Cells Exposed to Heat Shock

description: RFP-Lenti MDA-MB-231 GFP-actin cells were kept at 37C (ctrl) or exposed to heat shock at 45C (hs) for 60 minutes prior to fixation and staining with phalloidin and hoescht.
DOI: 10.6084/m9.figshare.21163030.v1
title: Bipolar database with data including current PTSD diagnosis

description: Dataset of 79 patients with BD-I and BD-II with a history of psychological trauma.
DOI: 10.6084/m9.figshare.28537136.v1
title: Telomere-to-telomere genome assembly of Phoxinus lagowskii

description: As an economic important and ecologically fish, Amur minnow (Phoxinus lagowskii) plays a significant role in food product as well as evolutionary, ecological research. In this study, we report a T2T (Telomere-to-telomere) genome for P. lagowskii with chromosome-level. The finally assembled genome size is 1.04 G, comprising 25 chromosomes.The telomeres identification, BUSCO evaluation, mapping coverage and sequencing depth revealed that the high-quality assembly. The T2T genomic information serves as an invaluable resource for studies in evolution, comparative genomics, fish breeding applications, and ecological research.
DOI: 10.6084/m9.figshare.28737632.v3
title: Dataset for Strain-induced superconducting proximity effect in topological insulator TaSe<sub>3</sub>

description: Dataset for "Strain-induced superconducting proximity effect in topological insulator TaSe<sub>3</sub>" by RM Lukmanova, IA Cohn, VE Minakova and SV Zaitsev-Zotov (arXiv:2502.02105)
DOI: 10.6084/m9.figshare.3458837.v1
title: AHOI v18.11

description: AHOI (Adjusted Hydrography Optimal Interpolation) is a simple physical-statistical model developed in the Thünen Institute of Sea Fisheries to produce monthly gridded in situ hydrography through various decades.The present data set for the North Sea, version 18.11, was used in the study Akimova et al, submitted to PLOSONE in 2016 and is shared here as part of PLOSONE data policy. The data is in netCDF format, one file per month.<br>
DOI: 10.17632/nkdr5sn88s
title: Healthcare Expat adjustment in Qatar

description: The study hypothesized that several factors significantly influence expatriate adjustment in Qatar's healthcare sector, affecting job satisfaction and patient care quality. This was supported by a survey of 385 healthcare workers in Qatar, conducted from October to December 2022. Using a 5-point Likert scale, the survey assessed expatriate experiences in adjustment and social support.

Key findings include:

Gender and Adjustment: Females adjusted better, with 35.2% rating themselves as 'Extremely Adjusted', compared to 28.7% of males.
Age Factor: The 35-44 age group showed the highest adjustment levels, with 36.4% in the 'Extremely Adjusted' category.
Language Proficiency: Arabic fluency correlated positively with adjustment; 27.4% fluent speakers were 'Extremely Adjusted'.
Social Support's Role: A critical factor, the absence of social support was linked to poor adjustment.
The survey provided insights into the complex nature of expatriate adjustment, encompassing not just professional adaptation but also cultural and social integration. The distinct adjustment patterns among demographics like females and those aged 35-44 indicate the effectiveness of targeted interventions.
The significance of social support and language skills highlights the need for programs fostering cultural assimilation and language learning. These insights are crucial for healthcare administrators and policymakers in Qatar, offering a basis for creating strategies to improve expatriate adjustment. Focusing on gender, age, language skills, and social support can lead to more effective policy interventions, enhancing expatriates' integration into the healthcare system, improving job satisfaction, and elevating patient care standards in Qatar
DOI: 10.21954/ou.rd.22659370.v1
title: XSENS Inertial Sensor Dataset

description: This dataset contains time series data of human joint angles collected using MoJoXlab sensor systems during various activities such as walking, jumping, squatting, and leg exercises. The dataset includes data for basic activities such as walking, sitting and relaxing, standing, lying down (supine position), jumping, and squatting. Additionally, it includes data for seated active and assisted knee extension/flexion and heel slide exercises. The data were collected at a sampling frequency of 50 Hz and exported as CSV files from both Xsens (https://www.xsens.com/) and NGIMU (https://x-io.co.uk/ngimu/) software. The joint angles were calculated using MoJoXlab software, which utilizes quaternion values to estimate the orientation of the sensors. The dataset consists of time series data collected from 15 participants using two sensor systems, Xsens and NGIMU, during various lower limb movements. The data were collected at a sampling frequency of 50 Hz and exported as CSV files. The dataset includes quaternion values for orientation, specifically for the left thigh (LT), right thigh (RT), left shank (LS), right shank (RS), left foot (LF), right foot (RF), and pelvis. The sensor positions are recommended by Xsens lower limb protocol. The column headers indicate the orientation (i.e., W, X, Y, Z and q0, q1, q2, q3), and P01_LT denotes participant 1 data for the left thigh sensor position. The dataset is useful for researchers and practitioners interested in studying human movement and developing algorithms for joint angle estimation. The data can be used to compare and validate different sensor systems and algorithms for estimating joint angles and develop and test new algorithms. The data can be downloaded and used for non-commercial research purposes with proper attribution to the authors and the data source.
DOI: 10.6084/m9.figshare.14743575.v7
title: Citizens' Attitudes Under Covid-19 Pandemic (CAUCP)

description: EN : The Citizens’ Attitudes Under the COVID-19 Pandemic (CAUCP) project is coordinated by Sylvain Brouard (Sciences Po, CEVIPOF), Michael Becher (IAST, University of Toulouse 1), Martial Foucault (Sciences Po, CEVIPOF) and Pavlos Vasilopoulos (University of York and CEVIPOF). <br> CAUCP surveyed public opinion throughout the Covid-19 pandemic in 11 democracies between March to December 2020. The datasets provide public opinion panel data to examine the political, behavioral, and attitudinal consequences of crisis across time and contexts.
DOI: 10.6084/m9.figshare.19945693.v1
title: Generalized anxiety disorder and prevalence of suicide risk among medical students

description: Abstract: Introduction: Generalized anxiety disorder (GAD) is a common pathology in modern life. Furthermore, Brazil ranks among one of the countries in Latin America with the highest increase in the number of suicides. Objective: The goal of this study is to evaluate the prevalence of GAD and suicide risk and their association in medical students from Belém - PA. Methods: The observational, cross-sectional and quantitative study included undergraduate medical students attending the 1st, 3rd and 5th years of Universidade do Estado do Pará as subjects of this research, totaling 153 students. It used a protocol created by the authors and the Mini International Neuropsychiatric Interview. The software BioEstat® 5.3 was used to perform the statistical analysis. Results: 52 (32,7%) of the 159 students have GAD and 48 (30,2%) pose a suicide risk, of which 18 have a mild risk (11,3%), 17 a moderate risk (10,7%) and 13 a high risk (8,2%). 46,7% and 50% of the 1st and 3rd-year students, respectively, have higher risk of suicide, which could be related to the competition faced during the University admission process and also during the first years of the clinical cycle. Of the 5th year students who pose a suicide risk, only 21,7% have high risk. Conclusion: It can be observed that GAD and suicide risk show high prevalence among medical students, which has to be investigated and treated aiming to reduce the impacts of those disorders on health professionals and students.
DOI: 10.6084/m9.figshare.21229205.v1
title: Custom code and scripts for mapping the origins of chromosomal segments

description: Custom code and scripts for mapping the origins of chromosomal segments
DOI: 10.6084/m9.figshare.22551316.v1
title: Supplementary Material for: Experiencing Workplace Bullying in Patients with Alopecia Areata: A Cross-Sectional Survey Study

description: Introduction: Alopecia areata (AA) is an immune-mediated hair loss condition with substantial psychosocial impact. The impact of AA on social interactions at work has not been established. Methods: We administered the Negative Acts Questionnaire-Revised scale to the National Alopecia Areata Foundation database to evaluate workplace bullying in patients with AA. Results: Ultimately, 673/1120 individuals who met inclusion criteria completed the survey. Most respondents were female (n=537, 79.8%), Caucasian (n=508, 75.5%), an average age of 46.8 ± 14, and employed full-time (n=427, 63.4%). Our results demonstrate 21.67% (n=146) of respondents experienced workplace bullying. Participants most frequently faced having their opinions ignored (53.8%, n=362), being excluded (47.7%, n=321), and had gossip spread about them (44.0%, n=296). Notably, 75.0% (n=120/160) of individuals who self-reported bullying addressed the behavior, however 30.8% of participants noted the bully continued (30.8%, n=37). Stress associated with filing a complaint (43.5%, n=293) and effect on future career options (36.1%, n=243) were common barriers to report bullying. Conclusion: This study expands our understanding of the psychosocial impact of AA by confirming individuals with AA experience workplace bullying. Stigma against patients may play a role in this phenomenon. Future work is warranted to identify strategies to reduce bullying against patients with AA.
DOI: 10.6084/m9.figshare.25413748.v1
title: Binarized Euclidean distance to nearest road, Greater Wellington Region

description: Binarized raster of land accessibility in the Greater Wellington Region, Aotearoa New Zealand, as the Euclidean distance to the nearest road in meters. Here, areas within 500 m of the nearest road are considered accessible, and areas greater than 500 m from the nearest road are considered less accessible.
DOI: 10.6084/m9.figshare.27914586.v1
title: The average and standard deviation values for the predicted oxygen solution energies across the entire Ti-Zr-Nb-Ta quaternary composition space

description: To analyze the oxygen solubility characteristics across the Ti-Zr-Nb-Ta quaternary composition space, we have varied each element’s composition in increments of 0.05, resulting in 1771 distinct compositions. For each composition, we construct a 6×6×6 supercell and iteratively place oxygen atom at each of all possible 1296 octahedral sites within the supercell. Using our trained ML model, we predict the oxygen solution energies for more than 2 million octahedral sites. The data file encompasses the average and standard deviation values for the predicted oxygen solution energies across the 1771 distinct compositions within the entire Ti-Zr-Nb-Ta composition space.
DOI: 10.6084/m9.figshare.28832441.v1
title: FB.Posts.Comments.V1.xls

description: The data were collected using Fplus to scrape comments from Facebook posts about the Belt and Road Initiative (BRI) in Vietnam.
DOI: 10.6084/m9.figshare.3565896.v1
title: Appendix K. Raw data file (in tabular form) of fine-root biomass from split cores by life and diameter category, soil depth, and across all sampling dates and replicate sites.

description: Raw data file (in tabular form) of fine-root biomass from split cores by life and diameter category, soil depth, and across all sampling dates and replicate sites.
DOI: 10.6084/m9.figshare.5100793.v5
title: Carpinus betulus chorology

description: Distribution map of common hornbeam (<i>Carpinus betulus</i>)<br><br>These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geo-databases, scientific and grey literature.<br>The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix "plg"), which define continuous areas of occupancy of the species, and with point features (name suffix "pnt"), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix "syn"). <br>Polygon borders delimiting species ranges are generalized across the mainland and sea boundaries. This offers the possibility to mask sea areas or to clip and extract the terrestrial range parts using GIS data layers of the users' choice. An additional version of polygon ranges are clipped with a coastline (name suffix "clip"), which have been derived from Natural Earth dataset "Admin 0 - Countries" 1:50M version 4.1.0 (https://www.naturalearthdata.com). <br><br>Please cite as:<br>Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007 <br><br>Additional information and used references are on 'supplementary materials' document:<br>https://doi.org/10.6084/m9.figshare.5091901<br><br>Chorological maps are part of the "European Atlas of Forest Tree Species" project:<br>https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.11583/dtu.7931444.v2
title: ALEX17 Multi-lidar measurements: vizualizing flow patterns with 2D and 3D wind fields over complex terrain

description: The present dataset is part of the Alaiz Experiment-2017 (ALEX17) conducted close to Pamplona, Spain, from Nov/2017 to Jul/2019. The unique feature of this dataset is the scale (~20km^2) and complexity (&gt;500m elevation change) of the topography covered by the measurements. This dataset consists of measurements of five long-range windscanner lidar systems, performing synchronized scanning trajectories that connects and follow both ridges in a 10km Z-shaped transect 125m a.g.l. where the 2D or 3D wind field can be reconstructed. The lidar scans also measure three 2D/3D virtual met masts in strategic points of the domain.
DOI: 10.17632/42djgwxfmv
title: DNA fingerprinting data for Camellia sinensis var. madoensis population in Phu Yen province, Vietnam

description: DNA fingerprints of individuals within the Camellia sinensis var. madoensis population distributed in Phu Yen province, Vietnam
DOI: 10.6084/m9.figshare.14916474.v1
title: Do bryophyte elemental concentrations explain their morphological traits?

description: Dataset and code to perform the analyses of the paper: Do bryophyte elemental concentrations explain their morphological traits?
DOI: 10.6084/m9.figshare.19786959.v1
title: R code for statistical analysis from Personality, sperm traits and a test for their combined dependence on male condition in guppies

description: There is evidence that animal personality can affect sexual selection, with studies reporting that male behavioural types are associated with success during pre- and post-copulatory sexual selection. Given these links between personality and sexual traits, and the accumulating evidence that their expression can depend on an individual's dietary status (i.e. condition), a novel prediction is that changes in a male's diet should alter both the average expression of personality and sexual traits, and their covariance. We tested these predictions using the guppy <i>Poecilia reticulata</i>, a species previously shown to exhibit strong condition dependence in ejaculate traits and a positive correlation between sperm production and individual variation in boldness. Contrary to expectation, we found that dietary restriction—when administered in mature adult males—did not affect the expression of either behavioural (boldness and activity) or ejaculate traits, although we did find that males subjected to dietary stress exhibited a positive association between sperm velocity and boldness that was not apparent in the unrestricted diet group. This latter finding points to possible context-dependent patterns of covariance between sexually selected traits and personalities, which may have implications for patterns of selection and evolutionary processes under fluctuating environmental conditions.
DOI: 10.6084/m9.figshare.2068410.v3
title: Redsea data 200 kHz.

description: redsea sonar dataset<br>
DOI: 10.6084/m9.figshare.26298793.v5
title: Coexistence of tropical forest tree species along the demographic buffering spectrum

description: Organisms have evolved diverse adaptive strategies to cope with environmental fluctuations. Slow-growing long-lived species tend to exhibit low temporal variability in population growth (strongly buffered demographically), whereas fast-growing short-lived species optimize growth in favorable years (weakly buffered). These patterns set up the expectation that differentiation in demographic buffering may reduce disparities in long-term fitness among species, enhancing the potential for coexistence in variable environments. Yet, this expectation has never been empirically tested for trees. Here, we quantified differences in long-term population growth among 204 co-occurring tropical trees spanning a life-history spectrum from strongly to weakly buffered. We found predictable variation in long-term population fitness for species at low densities, pointing to demographic differentiation as a key for coexistence in fluctuating environments. Simulated increases in temperature, precipitation, and drought variability led to divergent impacts on species' fitness and increased fitness differences. Together, these findings provide a novel perspective on the mechanisms that underpin the astounding tree diversity in tropical forests.
DOI: 10.6084/m9.figshare.7873847.v1
title: Two Educational Board Games for Teaching Startup Growth Hacking

description: This upload contains two board games for teaching growth hacking in startups. The first board game, Growthopoly, provides an overview of growth hacking practice categories (files labeled Game1_*). The second game, Game of Growth, provides insights into individual growth hacking practices (file labeled Game2_*).<br>The PDF files contain all the materials for each game and can be printed with minimal setup required. The cards print correctly in this form (i.e. the front and back align) but have to be cut out manually from A4-sized prints as the individual cards are much smaller than an A4 sheet.<br>These materials are based on a scientific preprint paper found on arXiv at [Link TBA]<br>