cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5543326
title: Dataset for "Constraining the response factors of an extractive electrospray ionization mass spectrometer for near-molecular aerosol speciation"

description: Online characterization of aerosol composition at the near-molecular level is key to understanding chemical reaction mechanisms, kinetics, and sources under various atmospheric conditions. The recently developed extractive electrospray ionization time-of-flight mass spectrometer (EESI-TOF) is capable of detecting a wide range of organic oxidation products in the particle phase in real time with minimal fragmentation. Quantification can sometimes be hindered by a lack of available commercial standards for aerosol constituents, however. Good correlations between the EESI-TOF and other aerosol speciation techniques have been reported, though no attempts have yet been made to parameterize the EESI-TOF response factor for different chemical species. Here, we report the first parameterization of the EESI-TOF response factor for secondary organic aerosol (SOA) at the near-molecular level based on their elemental composition. SOA was formed by ozonolysis of monoterpenes or OH-oxidation of aromatics inside an oxidation flow reactor (OFR) using ammonium nitrate as seed particles. A Vocus proton-transfer reaction mass spectrometer (Vocus-PTR) and a high-resolution aerosol mass spectrometer (AMS) were used to determine the gas phase molecular composition and the particle phase bulk chemical composition, respectively. The EESI response factors towards bulk SOA coating and the inorganic seed particle core were constrained by intercomparison with the AMS. The highest bulk EESI response factor was observed for SOA produced from 1,3,5-trimethylbenzene, followed by those produced from <em>d</em>-limonene and <em>o</em>-cresol, consistent with previous findings. The near-molecular EESI response factors were derived from intercomparisons with Vocus-PTR measurements, and were found to vary from 10<sup>3</sup> to 10<sup>6</sup> ions s<sup>-1</sup> ppb<sup>-1</sup>, mostly within ±1 order of magnitude of their geometric mean of 10<sup>4.6</sup> ions s<sup>-1</sup> ppb<sup>-1</sup>. For aromatic SOA components, the EESI response factors correlated with molecular weight and oxygen content, and inversely correlated with volatility. The near-molecular response factors mostly agreed within a factor of 20 for isomers observed across the aromatics and biogenic systems. Parameterization of the near-molecular response factors based on the measured elemental formulae could reproduce the empirically determined response factor for a single VOC system to within a factor of 5 for the configuration of our mass spectrometers. The results demonstrate that standard-free quantification using EESI-TOF is possible.
description: Data presented in the main text and figures, as well as the training data for the regression models are included. Underlying dataset is available from corresponding authors upon reasonable request.
DOI: 10.5258/soton/d1722
title: Dataset for: A robust, semi-automated approach for counting cementum increments imaged with X-ray computed tomography

description: Data of manuscript A robust, semi-automated approach for counting cementum increments imaged with X-ray computed tomography in PloS One.
DOI: 10.5281/zenodo.5543370
title: Geometries for 'Linear-scaling implementation of multilevel Hartree-Fock theory'

description: Geometry files (.xyz format) used in the paper '<em>Linear-scaling implementation of multilevel Hartree-Fock theory</em>'
DOI: 10.5281/zenodo.4639505
title: Geometries for 'Linear-scaling implementation of multilevel Hartree-Fock theory'

description: Geometry files (.xyz format) used in the paper '<em>Linear-scaling implementation of multilevel Hartree-Fock theory</em>'
DOI: 10.5281/zenodo.4019030
title: Noise files for the DISCO dataset

description: Post-filtered files of Freesound (https://freesound.org/). The files belong to one of these categories: baby, blender, dishwasher, shaver, fan, frying, printer, vacuum cleaner, washing machine or (flowing / flushing) water. The post filtering consisted in verifying that the files did belong to one of these categories and to filter out parts of them that were too low. If you use this dataset, please cite the following work: <pre>@article{furnon2021dnn, title={DNN-based mask estimation for distributed speech enhancement in spatially unconstrained microphone arrays}, author={Furnon, Nicolas and Serizel, Romain and Essid, Slim and Illina, Irina}, journal={IEEE/ACM Transactions on Audio, Speech, and Language Processing}, volume={29}, pages={2310--2323}, year={2021}, publisher={IEEE} } </pre>
description: Script to download these files is available on https://github.com/nfurnon/disco
DOI: 10.5281/zenodo.4019029
title: Noise files for the DISCO dataset

description: Post-filtered files of Freesound (https://freesound.org/). The files belong to one of these categories: baby, blender, dishwasher, shaver, fan, frying, printer, vacuum cleaner, washing machine or (flowing / flushing) water. The post filtering consisted in verifying that the files did belong to one of these categories and to filter out parts of them that were too low. If you use this dataset, please cite the following work: <pre>@article{furnon2021dnn, title={DNN-based mask estimation for distributed speech enhancement in spatially unconstrained microphone arrays}, author={Furnon, Nicolas and Serizel, Romain and Essid, Slim and Illina, Irina}, journal={IEEE/ACM Transactions on Audio, Speech, and Language Processing}, volume={29}, pages={2310--2323}, year={2021}, publisher={IEEE} } </pre>
description: Script to download these files is available on https://github.com/nfurnon/disco
DOI: 10.6084/m9.figshare.16715578
title: Laboratory measurement of wave-current ripple development

description: Large-scale flume experiments were conducted in the Total Environment Simulator at the University of Hull in order to study ripple dynamics in mixed sand–clay substrates under combined flows. This dataset provides detailed information of wave-current ripple development, recording by Ultrasonic Range System (URS), from beds with the initial clay content between 0% and 12.3%. In addition, the results of grain size analysis, using Malvern Mastersizer 2000, from sediment cores collected during the experiments are included, showing vertical change in clay content with ripple evolution. Moreover, hydrodynamic data including near-bed flow velocities monitored by Vectrino Profilers and water surface elevation recorded by acoustic water level sensors are also in the present dataset.
DOI: 10.5281/zenodo.5535693
title: KTU: K-mer Taxonomic Units improve the biological relevance of amplicon sequence variant microbiota data

description: Testing datasets and files for the KTU algorithm
DOI: 10.5281/zenodo.5535692
title: KTU: K-mer Taxonomic Units improve the biological relevance of amplicon sequence variant microbiota data

description: Testing datasets and files for the KTU algorithm
DOI: 10.25919/ww99-zj28
title: Parkes observations for project P1054 semester 2021APRS_11

description: With this proposal we ask time for a timing follow-up campaign of the first 5 mllisecond pulsars discovered in the TRAPUM (TRAnsients and PUlsars with Meerkat) survey. The sources have been detected in targeted observations of Fermi unidentified point sources. At least two of the new pulsars belong to binary systems and an initial orbital period of 8.5 hrs has already been estimated for the brightest source. Timing observations have an essential role in exploiting the full potential of any pulsar discovery, allowing the precise measurement of rotational, astrometric and orbital parameters which, in turn, give us powerful tools to improve our understanding of the physics in extreme environments as well as of the population of neutron stars as a whole. The UWL receiver of the Parkes telescope is a sensitive, versatile instrument that will allow us to successfully time these new sources, in the bright-end of TRAPUM discoveries. The UWL has also the unique advantage of allowing detailed studies of the eclipses of the so-called 'spider' pulsars, the vast majority of which have an associated Fermi counterpart.
DOI: 10.5255/ukda-sn-854705
title: State Narratives - Data Collection and Preparation, 1945-2018

description: We accessed state narratives through identifying, collating and reviewing documents such as white and green papers, policy papers and research reports, speeches, parliamentary debates and legislation, committee inquiries and reports, press releases and departmental memoranda, produced by different state actors, by which we mean the UK government and the opposition in Westminster. Documents from the 1940s were collected through searches of dedicated websites such as legislation.gov.uk and Historic Hansard, and access to specific records at The National Archives at Kew. Documents relating to the 2010s were accessed through two main sources. First, the GOV.UK platform of government websites, where we focussed on relevant offices and departments, such as the Office for Civil Society and the Department for Education. Second, we accessed parliamentary proceedings and committee inquiries through targeted searches of the UK Parliament website, which provides comprehensive access to proceedings in both the House of Commons and House of Lords (through Hansard) as well as to the work of parliamentary committees. We searched websites using terms such as ‘charity’, ‘voluntary organisation’ and ‘social enterprise’, to identify hundreds of potentially relevant items. Given the accessibility of online information, a far greater volume of material was available from the 2010s compared with the 1940s. All accessed documents were then collated – see accompanying summary spreadsheet - and skim read, with the most relevant for the project’s concerns about the role, position and contribution of voluntary action being selected for more detailed analysis.
DOI: 10.5255/ukda-sn-855213
title: Voluntary Sector Narratives, 1945-2018

description: We obtained the voice of voluntary action from the archives of five national voluntary organisations. Prior to submitting the proposal to ESRC we obtained privileged access to those collection which remained in private hands (including the archives of Children England, Age UK and Ambition). We have digitised selected documents from each. The documents available within these organisational archives are varied, but include items such as: annual reports, annual accounts, board papers and minutes, research report, policy position statements, and consultation responses.
DOI: 10.5255/ukda-sn-854702
title: Mass Observation Archive, 1947-2018

description: Material from the open access Mass Observation Archive (MOA) provided the views of the public for this study. We added to this data source by: (i) commissioning a directive in Spring 2018, Directive 111 Charity and the Welfare State; (ii) digitising all responses, and transcribing all handwritten responses, to the directive; (iii)transcribing portions of responses to 3 key directives sent out in 1947, which are part of Topic Collection 53; and (iv) importing these data into Nvivo (a computer assisted qualitative data analysis program (CAQDAS)) where they were analysed. As discussed in our proposal the MOA expects the project to archive all MOA related data (the Nvivo project will be in read-only form) with the MOA at The Keep, in Brighton, rather than the UK Data Archive, and this we have done. To obtain access to these digital copies please either visit The Keep, Brighton or contact the MOA via email. Access to these is at the discretion of the MOA, and on condition of signing a user's agreement (email: moa@sussex.ac.uk)
DOI: 10.6084/m9.figshare.16607423
title: Swadling et al Nature 2021 Supplementary Table 4 - metadata.gisaid.tsv

description: EpiCoV database on 26/7/2021 together with a GISAID Audacity phylogeny comprising 611,893 accessions. The alignment was subsampled to include 800 of each defined NextStrain phylogenetic clade, as provided by GISAID metadata. For clades containing less than 800 accessions all representatives of that clade were included resulting in a comprehensive sampling over the global phylogeny of 13,785 accessions encompassing the genomic diversity of SARS-CoV-2 to date.
DOI: 10.6084/m9.figshare.16607423.v1
title: Swadling et al Nature 2021 Supplementary Table 4 - metadata.gisaid.tsv

description: EpiCoV database on 26/7/2021 together with a GISAID Audacity phylogeny comprising 611,893 accessions. The alignment was subsampled to include 800 of each defined NextStrain phylogenetic clade, as provided by GISAID metadata. For clades containing less than 800 accessions all representatives of that clade were included resulting in a comprehensive sampling over the global phylogeny of 13,785 accessions encompassing the genomic diversity of SARS-CoV-2 to date.
DOI: 10.5517/ccdc.csd.cc26pw5z
title: CCDC 2046811: Experimental Crystal Structure Determination

description: Related Article: Nicholas L. Magann,  Mitchell T. Blyth,  Michael S. Sherburn|2021|Angew.Chem.,Int.Ed.|60|18561|doi:10.1002/anie.202107524
DOI: 10.5517/ccdc.csd.cc26pw60
title: CCDC 2046812: Experimental Crystal Structure Determination

description: Related Article: Nicholas L. Magann,  Mitchell T. Blyth,  Michael S. Sherburn|2021|Angew.Chem.,Int.Ed.|60|18561|doi:10.1002/anie.202107524
DOI: 10.5517/ccdc.csd.cc26pw71
title: CCDC 2046813: Experimental Crystal Structure Determination

description: Related Article: Nicholas L. Magann,  Mitchell T. Blyth,  Michael S. Sherburn|2021|Angew.Chem.,Int.Ed.|60|18561|doi:10.1002/anie.202107524
DOI: 10.5517/ccdc.csd.cc26pw82
title: CCDC 2046814: Experimental Crystal Structure Determination

description: Related Article: Nicholas L. Magann,  Mitchell T. Blyth,  Michael S. Sherburn|2021|Angew.Chem.,Int.Ed.|60|18561|doi:10.1002/anie.202107524
DOI: 10.5517/ccdc.csd.cc26pw93
title: CCDC 2046815: Experimental Crystal Structure Determination

description: Related Article: Nicholas L. Magann,  Mitchell T. Blyth,  Michael S. Sherburn|2021|Angew.Chem.,Int.Ed.|60|18561|doi:10.1002/anie.202107524
DOI: 10.5517/ccdc.csd.cc26pwb4
title: CCDC 2046816: Experimental Crystal Structure Determination

description: Related Article: Nicholas L. Magann,  Mitchell T. Blyth,  Michael S. Sherburn|2021|Angew.Chem.,Int.Ed.|60|18561|doi:10.1002/anie.202107524
DOI: 10.5517/ccdc.csd.cc26pwc5
title: CCDC 2046817: Experimental Crystal Structure Determination

description: Related Article: Nicholas L. Magann,  Mitchell T. Blyth,  Michael S. Sherburn|2021|Angew.Chem.,Int.Ed.|60|18561|doi:10.1002/anie.202107524
DOI: 10.5517/ccdc.csd.cc26pwd6
title: CCDC 2046818: Experimental Crystal Structure Determination

description: Related Article: Nicholas L. Magann,  Mitchell T. Blyth,  Michael S. Sherburn|2021|Angew.Chem.,Int.Ed.|60|18561|doi:10.1002/anie.202107524
DOI: 10.5517/ccdc.csd.cc26pwf7
title: CCDC 2046819: Experimental Crystal Structure Determination

description: Related Article: Nicholas L. Magann,  Mitchell T. Blyth,  Michael S. Sherburn|2021|Angew.Chem.,Int.Ed.|60|18561|doi:10.1002/anie.202107524
DOI: 10.5517/ccdc.csd.cc26pwg8
title: CCDC 2046820: Experimental Crystal Structure Determination

description: Related Article: Nicholas L. Magann,  Mitchell T. Blyth,  Michael S. Sherburn|2021|Angew.Chem.,Int.Ed.|60|18561|doi:10.1002/anie.202107524
DOI: 10.5517/ccdc.csd.cc28t1dk
title: CCDC 2109438: Experimental Crystal Structure Determination

description: Related Article: R. Moreno-Fuquen, K. Arango-Daraviña, A.R. Kennedy|2021|Acta Crystallogr.,Sect.C:Cryst.Struct.Chem.|77|621|doi:10.1107/S2053229621009487
DOI: 10.5281/zenodo.5543454
title: Directed Evolution of a Surface-Displayed Artificial Allylic Deallylase Relying on a GFP Reporter Protein

description: Data underlying the figures in the publication “Directed Evolution of a Surface-Displayed Artificial Allylic Deallylase Relying on a GFP Reporter Protein”, published in <em>ACS Catal</em>. <strong>2021</strong>, 11, 17, 10705–10712. https://pubs.acs.org/doi/10.1021/acscatal.1c02405 Table of contents: <strong>1. Dataset</strong>; Excel file with the experimental data for <em>figures 2a, 2b, 3b</em> and <em>5</em>, plus protocol for in vivo catalysis, sequencing data and the selection for rescreening.
DOI: 10.5281/zenodo.5543453
title: Directed Evolution of a Surface-Displayed Artificial Allylic Deallylase Relying on a GFP Reporter Protein

description: Data underlying the figures in the publication “Directed Evolution of a Surface-Displayed Artificial Allylic Deallylase Relying on a GFP Reporter Protein”, published in <em>ACS Catal</em>. <strong>2021</strong>, 11, 17, 10705–10712. https://pubs.acs.org/doi/10.1021/acscatal.1c02405 Table of contents: <strong>1. Dataset</strong>; Excel file with the experimental data for <em>figures 2a, 2b, 3b</em> and <em>5</em>, plus protocol for in vivo catalysis, sequencing data and the selection for rescreening.
DOI: 10.25625/8vukqa/klq7jr
title: 2021-09-25_GMDS2021_BumpyRoadPosterTeaser240.mp4

description: :unav
DOI: 10.25625/8vukqa/uxvegr
title: BumpyRoadPoster.pdf

description: :unav
DOI: 10.25625/8vukqa/6vnjj5
title: 2021-09-25_GMDS2021_BumpyRoadPosterTeaser.mp4

description: :unav
DOI: 10.25625/8vukqa
title: GMDS2021 ePoster and video teaser for DOI 10.3205/21gmds072

description: ePoster for the conference abstract "The bumpy road of FAIRification in practice" presented at the GMDS 2021 conference (remote, Kiel)
DOI: 10.5281/zenodo.5543462
title: Vanishing_Glaciers_Epilithic_Biofilms

description: - Dataset containing the separate output files from IMP, METABOLIC, gRodon, Anvi'o, MANTIS etc. for downstream analyses of epilithic biofilms from the NOMIS Vanishing Glacier's project
DOI: 10.5281/zenodo.5543469
title: Risk of bias in observational studies using routinely collected data of comparative effectiveness research: a meta-research study

description: We performed a meta-research study by searching PubMed for comparative effectiveness observational studies evaluating therapeutic interventions using routinely collected data published in high impact factor journals from 01/06/2018 to 30/06/2020. We assessed the reporting of study design (i.e., eligibility, treatment assignment, and the start of follow-up). Risk of selection bias and immortal time bias was determined by assessing if the time of eligibility, treatment assignment and the start of follow-up were synchronised to mimic the randomisation following the target trial emulation framework.
DOI: 10.5281/zenodo.5543468
title: Risk of bias in observational studies using routinely collected data of comparative effectiveness research: a meta-research study

description: We performed a meta-research study by searching PubMed for comparative effectiveness observational studies evaluating therapeutic interventions using routinely collected data published in high impact factor journals from 01/06/2018 to 30/06/2020. We assessed the reporting of study design (i.e., eligibility, treatment assignment, and the start of follow-up). Risk of selection bias and immortal time bias was determined by assessing if the time of eligibility, treatment assignment and the start of follow-up were synchronised to mimic the randomisation following the target trial emulation framework.
DOI: 10.5281/zenodo.5543476
title: Azotea Dataset

description: Latest monthly AZOTEA reduced CSV files
DOI: 10.5281/zenodo.4748540
title: One town's invasion by the pest slug Arion vulgaris (Gastropoda: Arionidae): microsatellite and other datasets

description: Datasets underlying the article: <strong>One town’s invasion by the pest slug <em>Arion vulgaris </em>(Gastropoda: Arionidae): microsatellites reveal little introgression from <em>Arion ater</em> and limited gene flow between infraspecific races in both species</strong> J.M.C. Hutchinson, B. Schlitt, H. Reise Published online 2021 in <em>Biological Journal of the Linnean Society</em>: https://doi.org/10.1093/biolinnean/blab082 <strong>Data_explanations.txt</strong> explains the contents of the other two files. <strong>Microsat_data.csv</strong> is a tab-separated file, formatted to load into Structure; for each of 218 slugs it lists the microsatellite allele lengths from 16 loci. <strong>Other_data.csv</strong> is a tab-separated file which lists further attributes of each slug; it includes also details of which individuals were included in each Structure analysis and the estimated ancestries calculated by these analyses.
DOI: 10.5281/zenodo.4748539
title: One town's invasion by the pest slug Arion vulgaris (Gastropoda: Arionidae): microsatellite and other datasets

description: Datasets underlying the article: <strong>One town’s invasion by the pest slug <em>Arion vulgaris </em>(Gastropoda: Arionidae): microsatellites reveal little introgression from <em>Arion ater</em> and limited gene flow between infraspecific races in both species</strong> J.M.C. Hutchinson, B. Schlitt, H. Reise Published online 2021 in <em>Biological Journal of the Linnean Society</em>: https://doi.org/10.1093/biolinnean/blab082 <strong>Data_explanations.txt</strong> explains the contents of the other two files. <strong>Microsat_data.csv</strong> is a tab-separated file, formatted to load into Structure; for each of 218 slugs it lists the microsatellite allele lengths from 16 loci. <strong>Other_data.csv</strong> is a tab-separated file which lists further attributes of each slug; it includes also details of which individuals were included in each Structure analysis and the estimated ancestries calculated by these analyses.
DOI: 10.15161/oar.it/74147
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.
DOI: 10.5255/ukda-sn-855190
title: Supporting the Measurement and Enhancement of African Children's Rights and Well-being in Nutrition, Healthcare and Education Through a Gender Lens, 2019-2020

description: This project involves the analysis of secondary policy and household survey macro- and micro-data that are relevant to African governments’ fulfilment of children’s rights and well-being in nutrition, healthcare and education, with a focus on gender equality. It includes national and sub-national demographic, economic and social variables obtained from various data resources. Details can be found via The African Report on Child Wellbeing 2020 (https://www.africanchild.report/index.php/home).
DOI: 10.6084/m9.figshare.16718291.v1
title: The influence of volcanic supply on the composition of modern river sands: the case study of the Ofanto river, southern Italy

description: Sampling sites, modal classes, outlines of sampling points sub-basins, quantification of lithologies for each sample sub-basin, complete modal analysis and compositional pie diagrams, pyroxene, garnet and amphibole EDS compositions
DOI: 10.6084/m9.figshare.16718291
title: The influence of volcanic supply on the composition of modern river sands: the case study of the Ofanto river, southern Italy

description: Sampling sites, modal classes, outlines of sampling points sub-basins, quantification of lithologies for each sample sub-basin, complete modal analysis and compositional pie diagrams, pyroxene, garnet and amphibole EDS compositions