cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.c682f/1
title: Genotypes from two Formica aquilonia supercolonies
DOI: 10.5061/dryad.dp24m/1
title: RFE2014_YJL_MvK

description: Species: Species nameFamily: Family nameOrigin: Alien or NativeCommonness: Common or RareTreatment: Nutrient TreatmentTotal_LA: Total leaf area whole plant(mm2)Initial_H: Initial height(cm)Total_biomass: Total biomass(g)RMF: Root mass fractionLength: Total Root length of the whole plant(m)Diam: Average Diameter of whole plant(mm)SRL: Specific root length (m/g)NA: Data missing because the plant died or sample lossing
DOI: 10.5061/dryad.f26dt/1
title: Erlikosaurus skull model

description: Digital model of the skull of the Cretaceous therizinosaur dinosaur Erlikosaurus andrewsi. Model derived from CT scanning of the original specimen. Model depicted in figures 1, 3-5. (.stl)
DOI: 10.5061/dryad.fq18t/2
title: LeCraw_Ecography_LeafSp_Decomp

description: Leaf litter species comparisons; Figure 2Raw leaf mass data from leaf species experiment in Brazil.Table headings:Brom_capacity_ml – Maximum water holding capacity of bromeliadLeaf_Sp – Leaf Species identified by genus Mesh – Mesh size of leaf packsM0_g – Starting dry leaf massMt_g – Final dry leaf mass (experiment duration 30 days)
DOI: 10.5061/dryad.k95j3.1
title: Data from: Spatial spread of the West Africa Ebola epidemic
DOI: 10.5061/dryad.k95j3.2
title: Data from: Spatial spread of the West Africa Ebola epidemic
DOI: 10.5061/dryad.k95j3.2/1.2
title: DataAndCode

description: Includes all data and code used in the manuscript. This includes data manipulation, data analysis and figures.
DOI: 10.5061/dryad.k95j3.2/2.2
title: Data

description: Trajectories of Ebola infection probability in West Africa.
DOI: 10.5061/dryad.kk85k/1
title: Data Dictionary and RAMAS Code

description: Description of the spatial layers used, and code for parameterizing the Spatial Data subprogram in program RAMAS GIS using the spatial files provided and equations/values given in the manuscript and Supplementary Information document.
DOI: 10.5061/dryad.mg363/21
title: SymbXGb.r

description: This script creates a classification/regression model then validates the model using a subset of samples where data is complete for all character traits.
DOI: 10.5061/dryad.mg363/22
title: makeTrainTest

description: R script that reads in all data sources, merges them into a single master data table, and then divides the data into a training and test set
DOI: 10.5061/dryad.nm61g/1
title: BreedingPairs
DOI: 10.5061/dryad.nm61g/2
title: MC1RJuveniles
DOI: 10.5061/dryad.nm61g/3
title: MicrosatellitesJuveniles
DOI: 10.5061/dryad.nm61g/4
title: Script Chi2 Simulation
DOI: 10.5061/dryad.nm61g/5
title: script FIS Simulation
DOI: 10.5061/dryad.nm61g/6
title: Script proportion of assortative pairing
DOI: 10.5061/dryad.p15br/1
title: RAD genotypes at sex-associated loci for Wood River individuals

description: RAD genotypes at seven sex-associated loci in 286 individuals from the Wood River basin.  Some loci contain multiple SNPs (e.g. locus 30453).  The position of the SNP in the RAD tag is found after the underscore in the locus designation (e.g designation 30453_92 contains genotypes for a SNP at position 92 in locus 30453).  Presence/absence loci do not contain SNPs.  Individuals were sampled from six locations in the Wood River basin and each location is designated with a different code in the individuals column.
DOI: 10.5061/dryad.p15br/2
title: genotype data from 5'-nuclease, sdY, and 18s assays in 8 collections

description: Genotype data from two 5'-nuclease assays developed from RAD data (61628, 76412), sdY, and 18s assays.  If 18s was absent, the genotype for sdY was considered a no call, even if an sdY band was present.
DOI: 10.5061/dryad.p5067/1
title: Data for Fig F1 directions of selection

description: Directions of selection- short and long development time and antagonistic and synergistic directions of selection, as in Figure F1.
DOI: 10.5061/dryad.q5gh6/1
title: MammalData_Caudill

description: Field data collected on mammal abundance and species richness in coffee landscapes in Chiapas, MX (Jan - April 2014). All parameters are defined within the manuscript.
DOI: 10.5061/dryad.rs3q8/1
title: Webster (2016) Leader-follower data for DRYAD

description: Arrival times data
DOI: 10.5061/dryad.s8v80/3
title: SNP_calls

description: Various files associated with calling SNPs from UCE loci for use with SNAPP and Structure
DOI: 10.5061/dryad.s8v80/4
title: UCE Data Matrix

description: Concatenated UCE data matrix for phylogenetic analysis
DOI: 10.5061/dryad.s8v80/5
title: mtDNA alignment

description: Alignment of 13 mtDNA protein coding gene for phylogenetic analysis
DOI: 10.5061/dryad.s8v80/6
title: mtDNA partitions

description: Partition file for mtDNA alignment
DOI: 10.5061/dryad.s8v80/7
title: DNA Data Statistics Table

description: Extended table with statistics on sequenced DNA data for individual specimens
DOI: 10.5061/dryad.s8v80/8
title: Scripts for SNP Calling

description: Various custom scripts used to call SNPs for Structure and SNAPP
DOI: 10.5061/dryad.sp152/1
title: Perceptions of research bronchoscopy - focus group discussion 1 transcript

description: This is the transcript of the first focus group discussion with the relatives / carers of TB patients in urban Blantyre, Malawi.  The transcript includes the Chichewa to English translation.  Anonymised data presented.
DOI: 10.5061/dryad.t1204/10
title: fixed.and.seg.loci

description: Simulated data
DOI: 10.5061/dryad.t1204/11
title: r effect on bottleneck

description: Simulated data
DOI: 10.5061/dryad.t1204/6
title: LifetimeFitnessPerMom
DOI: 10.5061/dryad.t1204/7
title: demogenet

description: Code for simulations
DOI: 10.5061/dryad.t1204/8
title: ID&Heterosis vs Nc&He

description: Simulated data
DOI: 10.5061/dryad.t1204/9
title: He vs N sim

description: Simulated data
DOI: 10.5061/dryad.133n7/1
title: Burke_Barter_Cabral_DRYAD

description: Raw phenotype data analyzed in the manuscript.  These are contained as five worksheets within one larger Excel spreadsheet.  Please see ReadMe for details.
DOI: 10.5061/dryad.170k4/1
title: ReadMeFirst

description: Instructions and explanations for all files uploaded in connection to this publication.
DOI: 10.5061/dryad.22t16/7
title: Data 7. Additional cushion's parameters

description: Data 7. Cushion's parameters along the elevation gradient for two taxas, Azorella compacta and Pycnophyllum spp.: relative mortality, surface area and height.
DOI: 10.5061/dryad.2ck58/1
title: Willson - Python Indirect Effects Data

description: MS excel file with mammal observation (camera trap) and nest predation rate data.
DOI: 10.5061/dryad.2f7b2/1
title: SupplementalData

description: Species list, classification (e.g. Endemic, Native, Pacific Tramp, Exotic to Pacific), and incidence matrix of data used in this analysis.
DOI: 10.5061/dryad.2vn65/1
title: ACE 130 reviewer #2.MWa response.classification table.docx

description: An analysis by the expert peer reviewer #2 and expert coauthor, MaW, of our classification system.
DOI: 10.5061/dryad.2vn65/24
title: Thiopental studies

description: A literature review of recently published papers using thiopental as part of the anesthetic technique.
DOI: 10.5061/dryad.2vn65/25
title: RCTs not used in comparisons.xlsx

description: A description of the RCTs not merged in the five comparisons.
DOI: 10.5061/dryad.2vn65/26
title: Quality of the evidence.docx

description: Experts state that authors need to provide more specific information in order to properly grade the seven risk of bias domains.
DOI: 10.5061/dryad.2vn65/27
title: ACE130 reviewer#1.defense RCT merge criteria.summary.docx

description: The first of two documents of an edited version of peer reviewer #1's comments regarding the content of this review with our responses. These responses were revised since the original authors’ response. The focus of the first document is a summary of the more detailed second document which analyzes the strengths and weakness of the criteria used to merge the RCTs in the five comparisons of this review.
DOI: 10.5061/dryad.2vn65/28
title: ACE 130 reviewer#1.defense RCT merge criteria.details.docx

description: A more detailed analysis of our response to peer reviewer #1 as described in the previous document.
DOI: 10.5061/dryad.2vn65/29
title: ACE 130 Peer reviewer.#2.docx

description: Our responses to peer reviewer #2 discussed topics such as explicit and implicit memory, peri-operative dreams, PTSD, amongst other topics.
DOI: 10.5061/dryad.2vn65/3
title: ACE 130 reviewer #3 peer review.docx

description: A discussion of the definition of consciousness, wakefulness, implicit memory and awareness. There are discussions of IV techniques and IFT and the relevance the table in Cardiovascular Function & Pathologies called Effects of Anesthetic Drugs on Cardiovascular Function.
DOI: 10.5061/dryad.32mq0/1
title: Data

description: Networks and traffic data used in the manuscript.
DOI: 10.5061/dryad.3365t/1
title: Ballast water records

description: Shipping data from Caribbean to Pacific US coast from the years 2006-2013 for ships without BWE
DOI: 10.5061/dryad.3365t/2
title: Lionfish occurrence and environmental data

description: Lionfish occurrence data provided by the U.S. Geological Survey combined with environmental data provided by AquaMaps
DOI: 10.5061/dryad.46274/1
title: Prokop_etal._data

description: Data collected from lab experiments.
DOI: 10.5061/dryad.5cb57/1
title: Electronic Supplementary Material 1

description: Nexus file containing character matrix and resulting trees (27 MPTs + strict consensus). Characters 1-99 (with prefix "WHF") are described in Wesley-Hunt & Flynn (2005). See Materials and Methods and Appendix II for additional details.
DOI: 10.5061/dryad.5cb57/2
title: Electronic Supplementary Material 2

description: Nexus file containing character matrix with alternative coding of Character 31 ("WHF31") and resulting trees (27 MPTs + strict consensus). In this matrix, States 1 and 2 of the original matrix (Electronic Supplementary Material 1) were combined into a single state (new State 1). Note the topology of strict consensus tree is identical to that in Electronic Supplementary Material 1.
DOI: 10.5061/dryad.5k3j3/1
title: Trinity contigs

description: Zip file with Trinity assemblies for all samples in fasta format
DOI: 10.5061/dryad.5k3j3/2
title: Concatenated mactrices

description: Concatenated matrices in phylip for all data sets used in the study.
DOI: 10.5061/dryad.72tp3/1
title: Assemblage-level data for North America and Europe

description: Two files include data for North American and European dragonfly assemblages, separately. This data was used for most analysis and figures. An additional file includes the pooled data, which we used to compare the slopes of correlations of colour lightness against selected climate variables between the two continents. Variables are: mean colour lightness (meanRGB), the phylogenetic component of colour lightness (mean_A), the specific component of colour lightness (mean_E), 19 aggreagted BIOCLIM varaibles (bio1_mean to bio19_mean), mean altitude (alt_mean) and geographical coordinates (lng and lat).
DOI: 10.5061/dryad.b167g/1
title: Data for Limiting Pore Size Estimates

description: The data file (excel) provides information on mouthpart conduit sizes for each tested species, the pore size from which they were fed, and the presence/absence of nanoparticles in their crops. The presence of nanoparticles indicated the ability to feed.
DOI: 10.5061/dryad.d1hg5/2
title: Data_for_Parsing_the_life-shortening_effects_of_dietary_protein

description: This folder contains 8 txt files with all the data to reproduce the results: Survival data from all diets; Lipid proportion and Foraging effort for Full mixture diets; Weight of food pellets for Full mixture diets.
DOI: 10.5061/dryad.d2t15/1
title: Data for CMR modelling

description: Dataset used in combined genus and in genus-specific CMR modelling
DOI: 10.5061/dryad.d9f36/1
title: Parental and F1 hybrid reciprocal transplant data

description: Parental and F1 hybrids (GENO) were transplanted into four environments (ENV). Three populations (TypeS) represent each parental ecotype (Type) and six F1 hybrid crosses (TypeS) represent the F1 hybrids. Family denotes the full-sibling families replicated within each transplant environment (ENV) and environmental block (block). GE represents whether seeds germinated. D80 and D100 is the presence of seedlings at day 80 and 100, respectively. Surv represents survival to truncation, L10 is the ability for plants to reach ten leaves and Bud is whether or not they produced a bud and reached maturity. Totaldays is the number of days they were alive and CD320 is the censor for survival analysis at day 320. D320 is presence at day 320, with NA representing plants that did not germinate.
DOI: 10.5061/dryad.f26dt/2
title: Therizinosaurus claw model

description: Digital model of the manual ungual of the Cretaceous therizinosaur dinosaur Therizinosaurus cheloniformes. Model derived from photogrammetry of the original specimen. Model depicted in figure 2. (.stl)
DOI: 10.5061/dryad.f26dt/3
title: Dysalotosaurus braincase model

description: Digital model of the braincase of the Jurassic ornithopod dinosaur Dysalotosaurus lettowvorbecki. Model derived from CT scanning of the original specimen. Model depicted in figures 6. (.stl)
DOI: 10.5061/dryad.g1d56/1
title: HRazifard_cpDNA_11APR16

description: Chloroplast DNA (cpDNA) sequence alignment including matK/trnK and rbcL
DOI: 10.5061/dryad.g1d56/2
title: HRazifard_ITS_11APR16

description: Internal Transcribed Spacer (ITS) sequence alignment
DOI: 10.5061/dryad.g1d56/3
title: HRazifard_phyC_11APR16

description: Phytochrome C (phyC) sequence alignment
DOI: 10.5061/dryad.g62f6/1
title: scen1_toad

description: Generated data for the SRM boreal toad scenario with 80 sites to be used with 2-species modeling.
DOI: 10.5061/dryad.g62f6/2
title: scen2_toad_2N

description: Generated data for the SRM boreal toad scenario with 160 sites to be used with the dynamic 2-species model.
DOI: 10.5061/dryad.g62f6/3
title: scenario_3_missing

description: Generated data for the SRM boreal toad scenario with 80 sites and some missing data, as described in the manuscript, to be used with the dynamic 2-species model.
DOI: 10.5061/dryad.g62f6/4
title: scen4_rare_severe

description: Generated data for rare and susceptible amphibian scenario with 80 sites to be used with dynamic 2-species model.
DOI: 10.5061/dryad.g62f6/5
title: ss_occ_bd_cov

description: Generated data for the SRM boreal toad scenario with 80 sites converted to a single species format to assess how inference changes when the unobservable state is ignored.
DOI: 10.5061/dryad.gt3b1/1
title: adults genotypes

description: Genotypes of each Tibouchina pulchra adult plant. We sampled individuals occurring in 14 distinct populations. First column refers to individual index comprising their “area” (P or S), their population (Alm—Almada; Cam— Camburi; Pro—Promirim; Pur—Puruba; Sed—Sede; Uba—Ubatumirim; Zer—Zero; Ent—Entrada; Faz—Fazenda; Kso—Km88; Kss—Km86; Mir—Mirante; Poc—Poço do Pito; Pos—Posto II) and number. Second column refers to the loci and 3rd to 6th column refers to the allele at that loci.
DOI: 10.5061/dryad.gt3b1/2
title: progeny genotypes

description: Genotypes of each Tibouchina pulchra progeny plant. We germinated seeds from adult individuals and sampled from ten to 21 progeny individuals when the seedlings reached a size enough to perform DNA extraction. First column refers to the family (fruit) that the seedlings belong. Second column describes the progeny index indicating the area (P or S), mother and direction of fruit collection. Third column refers to the loci and 4th to 7th column refers to the allele at that loci.
DOI: 10.5061/dryad.gt3b1/3
title: points

description: Geographical information about each adult individual of Tibouchina pulchra.
DOI: 10.5061/dryad.j4754/1
title: Data
DOI: 10.5061/dryad.jm8s7/1
title: Temperature, Synechococcus concentration, division rates, and loss rates

description: File contains tab-delimited columns of date, temperature (degree Celsius), Synechococcus concentration (cells per mL), division rate (1/d), and loss rate (1/d) at the Martha's Vineyard Coastal Observatory for 2003-2016. Unavailable data are indicated with a NaN.
DOI: 10.5061/dryad.jm8s7/2
title: Nutrient data

description: File contains tab-delimited columns of date, nitrate+nitrite, ammonium, phosphate and silicate concentrations (micromolar) at the Martha's Vineyard Coastal Observatory from 2003-2015. Values are means of 2-3 technical replicates. Missing entries are denoted by NaNs.
DOI: 10.5061/dryad.k486f/1
title: Output dataset of EEG/EOG B/NHE control

description: Output dataset of hybrid EEG/EOG brain/neural hand exoskeleton control.
DOI: 10.5061/dryad.k486f/2
title: Source Codes and Software for EEG/EOG B/NHE control used in Soekadar et al. 2016

description: This data container includes the custom-made modules for EEG/EOG-based B/NHE control that were embedded into the BCI2000 environment used in Soekadar et al. 2016. Please see the included tutorial for instructions on how to install and run the software.
DOI: 10.5061/dryad.kp74v/1
title: Data_Buechel et al. 2016. Artificial selection on male genitalia length alters female brain size

description: Full data on total brain weight (mg) and the volumes (mm3) of brain substructures of gonopodium-selected mosquitofish (G.holbrooki).
DOI: 10.5061/dryad.n5fr8/1
title: Figure S1 Expression of Sdt in embryogenesis.

description: (A) Extracts of 0-16h old embryos of either sdtK85 germ lines clones (mated with males carrying an FM7-ChFP balancer and sorted against ChFP) or wild type flies were blotted against Sdt and Actin. Both bands seen above the 100kDa marker band appear to be specific. (B) Extracts of staged embryos were blotted against Sdt and Actin.  (C-D) Heterozygous and zygotic mutant sdtK85 embryos were stained with anti Sdt and DAPI. Note that the morphology of sdtK85 mutant embryos is already disturbed. Scale bars = 50µm.
DOI: 10.5061/dryad.n850m/1
title: Cascales-Miñana and Gerrienne 2016_Supporting Information

description: Raw data for data analysis of the linked manuscript
DOI: 10.5061/dryad.p5067/2
title: Data for Fig F2 PTTH and 20E

description: Relationship between timing of PTTH and ecdysone secretion as in Figure F2.
DOI: 10.5061/dryad.p5067/3
title: dat for Fig F3 JHE

description: Relationship between JHE titers and critical weight and body size, as in Figure F3.
DOI: 10.5061/dryad.p5067/4
title: dat for Fig F4 mortality

description: Mortality data for each of the selected lines, as in Figure F4.
DOI: 10.5061/dryad.p5067/5
title: All lines

description: Response to selection of all lines for body size, development time, critical weight, interval to cessation of growth and growth rate.
DOI: 10.5061/dryad.p5067/6
title: Data for Figs 3 and 4

description: Response to ten generations of selection for body size and development time individually and their simultaneous response, as in Figures 3 and 4.
DOI: 10.5061/dryad.p5067/7
title: data for Fig 6 observed vs predicted

description: Relationship between the predicted and observed response to selection of body size and development time across all genetic lines, as in Figure 6.
DOI: 10.5061/dryad.p5067/8
title: data for Fig 7 photogate and 20E

description: Timing of photoperiodic gate for PTTH secretion and ecdysone secretion, as in Figure 7.
DOI: 10.5061/dryad.pq6ts/1
title: lineages_data

description: Inbred and outbred lineages from which fitness components were obtained. Arabic numerals refer to population numbers. Numbers of populations correspond to those in Table S1.
DOI: 10.5061/dryad.rc073/1
title: DICOM data part 1

description: Combine xaa (part 1) and xab (part 2) to obtain a zip-file of size 1.67 GB. The zip-file contains anonymized DICOM PET and MRI data from 7 subjects in their respective folders named C01-C07.
DOI: 10.5061/dryad.rc073/2
title: DICOM data part 2

description: Combine xaa (part 1) and xab (part 2) to obtain a zip-file of size 1.67 GB. The zip-file contains anonymized DICOM PET and MRI data from 7 subjects in their respective folders named C01-C07.
DOI: 10.5061/dryad.rk6hd/1
title: Shrub climbing by Buthus occitanus scorpions

description: Field collected data in Excel files
DOI: 10.5061/dryad.sp152/2
title: Perceptions of research bronchoscopy - focus group discussion 2 transcript

description: This is the transcript of the second focus group discussion with the TB patients on treatment in urban Blantyre, Malawi.  The transcript includes the Chichewa to English translation.  Anonymised data presented.
DOI: 10.5061/dryad.t5c97/1
title: Ecosystem recovery database

description: This meta-analytical database includes data from 354 studies of ecosystems undergoing recovery worldwide. We include ecosystem recovering from agriculture, logging, eutrophication, mining, hydrological disruption, overfishing, oil spills, and one natural disturbance, hurricanes. We include studies reporting three measures, two in the recovering ecosystem and one in a reference site.
DOI: 10.5061/dryad.td30f/1
title: Agaricales mushroom at BIONTE area from Central Amazonia

description: Agaricales mushroom separated by species and/ or morphotype and its respective collection number,  according to substrate type (trunk, branches, leaf and soil), season (dry or rainy), month, year (2012 and 2013), forest stage (secondary= transects S1, S2, S3 and  S4) and primary = transects P1, P2, P3 and P4
DOI: 10.5061/dryad.v057n/1
title: Core_Dataset

description: This datasheet contains the core data by individual and plot for the manuscript, including environmental data, Trientalis traits, and community traits. See the Core_Dataset_Metadata.csv for details.
DOI: 10.5061/dryad.v057n/2
title: Core_Dataset_Metadata

description: Metadata with column definitions and units for Core_Dataset.csv
DOI: 10.5061/dryad.v057n/3
title: RII_Trait

description: This file contains relative interaction data and traits by plot. See  RII_Trait_Metadata.csv for details.
DOI: 10.5061/dryad.v057n/4
title: RII_Trait_Metadata

description: Metadata file with column descriptions and units for the RII_Traits.csv file.
DOI: 10.5061/dryad.0nm3k/1
title: Supplementary Material Table

description: Table with estimates of reproductive isolation for all studies. Complete references in separate file.
DOI: 10.5061/dryad.0nm3k/2
title: Supplementary Material References

description: Complete reference information for studies included in meta-analysis.
DOI: 10.5061/dryad.15512/1
title: cpSNP allele frequencies

description: Chloroplast SNP allele frequencies
DOI: 10.5061/dryad.15512/2
title: Environmental data

description: Environmental data from 1931-1960 and 2071-2100
DOI: 10.5061/dryad.15512/3
title: nSSR genotypes

description: Microsatellite genotypes
DOI: 10.5061/dryad.15512/4
title: SNP allele frequencies in candidate genes

description: SNP allele frequencies in candidate targets
DOI: 10.5061/dryad.15512/5
title: Amplified reference sequences

description: Amplified reference sequences of candidate genes
DOI: 10.5061/dryad.170k4/10
title: Data_Fig2B_LargeLocus_gain

description: Data used to generate Fig. 2B (squares). For further details, please refer to ReadMeFirst file (available separately).
DOI: 10.5061/dryad.170k4/2
title: Divergence_With_Migration

description: Simulation of multilocus model of divergence-with-migration.
DOI: 10.5061/dryad.170k4/3
title: EstablishmentModel_DifferentiatedLocus

description: Simulation of two-locus establishment model. The code estimates the establishment probability at the differentiated locus.
DOI: 10.5061/dryad.170k4/4
title: EstablishmentModel_UndifferentiatedLocus

description: Simulation of the two-locus establishment model. The code estimates the establishment probability at an undifferentiated locus.
DOI: 10.5061/dryad.170k4/5
title: GainModel_MoreStronglyDifferentiatedLocus

description: Simulation of the two-locus gain model. The code estimates the establishment probability at the more strongly differentiated locus.