cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28806470.v3
title: Research Data Journal Isbat (16 April 2025).csv

description: This study aims to analyze the collaboration between servant leadership and Adversity Quotient (AQ) in improving employee performance and commitment to the organization at the Bogor Regency Regional-Owned Enterprises (BUMD), with work motivation as an intervening variable. This study uses a sequential explanatory method with Structural Equation Modeling (SEM). The results of the study indicate that the collaboration between servant leadership and AQ has a significant effect on employee performance, commitment to the organization, and work motivation. Work motivation is proven to act as a mediator that strengthens the influence of servant leadership and AQ on employee performance and commitment. In conclusion, strengthening the collaboration between servant leadership, AQ, and work motivation can be an effective strategy to improve employee performance and commitment at BUMD.
DOI: 10.6084/m9.figshare.20453322.v8
title: Sources and Data Lists of Cell Lines

description: Summary of Sources and Data Lists of Cell Lines <br> The summary shows the cell lines used for the RNA-seq, Exome-seq, and ChIP-seq data sets and their sources.
DOI: 10.6084/m9.figshare.1189272.v1
title: LV60C sandpack

description: Micro-CT image of LV60C sandpack and extracted networks (Dong and Blunt, 2009, DOI: http://dx.doi.org/10.1103/PhysRevE.80.036307) The image can be visualised by opening the Nrrd header file LV60C.nhdr in visualization software such as Paraview or ImageJ (http://fiji.sc/Fiji), You can open the LV60C.nhdr file in a text editor to see the image and voxel sizes (keywords "sizes" and "space directions" respectively). See the link provided for further information.
DOI: 10.6084/m9.figshare.25585254.v1
title: Personas_Conversations_DATA_Excel.xlsx

description: Burden of disease in hereditary angioedema
DOI: 10.6084/m9.figshare.3544265.v1
title: Appendix B. Fertilization applied in arable fields.

description: Fertilization applied in arable fields.
DOI: 10.5281/zenodo.15568863
title: Burnout among Ukrainian academic staff during wartime

description: This dataset and accompanying manuscript present the findings of a cross-sectional study examining burnout levels among Ukrainian academic staff during the full-scale war. Data were collected via an online survey from December 2023 to February 2024 and include responses from 429 academic staff members across displaced and non-displaced Ukrainian universities. Burnout was measured using the Maslach Burnout Inventory-Human Services Survey (MBI-HSS), and institutional support was assessed via custom indicators.

This research contributes to the understanding of academic resilience in war-affected contexts and highlights the need for culturally responsive and credible institutional support mechanisms. The dataset can be used to inform further research on mental health in higher education during crises.
DOI: 10.5281/zenodo.15568864
title: Burnout among Ukrainian academic staff during wartime

description: This dataset and accompanying manuscript present the findings of a cross-sectional study examining burnout levels among Ukrainian academic staff during the full-scale war. Data were collected via an online survey from December 2023 to February 2024 and include responses from 429 academic staff members across displaced and non-displaced Ukrainian universities. Burnout was measured using the Maslach Burnout Inventory-Human Services Survey (MBI-HSS), and institutional support was assessed via custom indicators.

This research contributes to the understanding of academic resilience in war-affected contexts and highlights the need for culturally responsive and credible institutional support mechanisms. The dataset can be used to inform further research on mental health in higher education during crises.
DOI: 10.6084/m9.figshare.28236776.v2
title: Australian social vulnerability index in 2001-2021

description: Using Cutter’s social vulnerability framework, this study constructs fine-grained, longitudinal measures of social vulnerability for urban and rural Australia across five census years (2001–2021). Spatial patterns, inequities, and associations between social vulnerability and the built environment (30 indicators) are examined through machine learning methods. Key findings show that while the most vulnerable areas remain consistent over time, inequities have decreased, and clustering has increased. Resilient areas feature better access to public facilities, housing diversity, and commercial density, which collectively reduce vulnerability. Upgraded built environments attract higher socioeconomic populations, further lowering vulnerability at aggregated levels. To date, this study is the first to provide a comprehensive, longitudinal, and spatially explicit assessment of social vulnerability across Australia.
DOI: 10.6084/m9.figshare.14483133.v5
title: Travel-mode classification based on GPS-trajectory data and geographic information

description: the dataset and codes used in the study "Travel-mode classification based on GPS-trajectory data and XGBoost classifier"
DOI: 10.6084/m9.figshare.24473182.v1
title: narative interview

description: narrative of interview
DOI: 10.6084/m9.figshare.21547893.v2
title: shared data.sav

description: The anonymized dataset used in the manuscript "Pre-Emptive antimicrobial locks decrease long-term catheter-related bloodstream infections in hemodialysis patients. A pilot study."
DOI: 10.6084/m9.figshare.24681405.v1
title: R script to query the SQLite database

description: R script to query the SQLite database
DOI: 10.6084/m9.figshare.21088432.v1
title: S1 Data

description: S1 Data: <strong>Differentially abundant amplicon sequence variants (ASVs) between the two diet suppliers."</strong>
DOI: 10.6084/m9.figshare.20926879.v1
title: Supplementary Material for: Impact of <b><i>RNF213</i></b> c.14576G&gt;A Variant on the Development of Direct and Indirect Revascularization in Pediatric Moyamoya Disease

description: <b><i>Background:</i></b> Superficial temporal artery (direct) and encephalomyosynangiosis (indirect) revascularization may develop after combined bypass surgery in pediatric patients with moyamoya disease (MMD). However, arterial development varies widely among patients, and the underlying mechanisms remain unknown. <b><i>Objectives:</i></b> We evaluated the relationship between the development of donor arteries after bypass surgery in pediatric patients with MMD and the MMD-susceptibility gene variant c.14576G&gt;A of ring finger protein (RNF) 213. <b><i>Methods:</i></b> The data of pediatric patients with MMD (age &lt;16 years at the time of surgery) treated with combined bypass surgery between September 2013 and April 2019 were consecutively analyzed. Quantitative measurements of the superficial temporal artery (STA), deep temporal artery (DTA), and middle meningeal artery (MMA) diameters with magnetic resonance angiography (MRA) source imaging were performed preoperatively and at 6–12 months postoperatively. The postoperative caliber change ratios (CCRs) were calculated. The relationship between CCRs and <i>RNF213</i> c.14576G&gt;A status was examined. <b><i>Results:</i></b> Forty-eight hemispheres from 28 pediatric patients with MMD were examined. Three hemispheres belonged to patients with the AA genotype; 33 to patients with the AG genotype (AA/AG group); and 12 to patients with the GG genotype (GG group; wild type). The CCRs for the DTA were significantly higher in patients with RNF213 variant (AA/AG group; 2.5 ± 0.1) than in the GG group (2.0 ± 0.2) (<i>p</i> = 0.03), whereas the CCRs for the STA were significantly higher in the GG (1.6 ± 0.1) than in the AA/AG group (1.3 ± 0.6) (<i>p</i> = 0.02). There was no significant difference in the CCRs for the MMA and basilar artery between the groups. Other factors, including sex, age, and MRA grading, were not associated with the development of specific bypass development. <b><i>Conclusions:</i></b> The extent of collateral development associated with direct or indirect bypass was found to differ between the genotypes of the <i>RNF213</i> c.14576G&gt;A associated with pediatric MMD. This genetic variant correlates with the development of the disease and affects revascularization after bypass surgery in pediatric patients with MMD.
DOI: 10.25909/27276171.v1
title: Data associated with Figure 4a

description: Cumulus expansion index scores for individual experimental replicates for the in vivo and invitro matured cumulus oocyte complexes groups.
DOI: 10.6084/m9.figshare.21791933.v1
title: Introduction and Clinical Validation of an Updated Biomechanically Corrected Intraocular Pressure bIOP (v2)

description: To improve the stability of the Corvis ST biomechanically-corrected intraocular pressure measurements (bIOP) after refractive surgery and its independence of corneal biomechanics. A parametric study was carried out using numerical models simulating the behavior of the eye globe under the effects of IOP and Corvis ST external air pressure and used to develop a new algorithm for bIOP; bIOP(v2). It was tested on 528 healthy participants to evaluate correlations with CCT and age. Its ability to compensate for the geometrical changes was tested in 60 LASIK and 80 SMILE patients with six months follow up. The uncorrected Corvis ST IOP (CVS-IOP) and the two versions of biomechanically corrected IOP; bIOP(v1) and bIOP(v2), were compared. In the healthy dataset, bIOP(v2) had weak and non-significant correlation with both CCT (R = −0.048, <i>p</i> = .266) and age (R = 0.085, <i>p</i> = .052). For bIOP(v1), the correlation was non-significant with CCT (R = −0.064, <i>p</i> = .139) but significant with age (R = −0.124, <i>p</i> &lt; .05). In both LASIK and SMILE groups, the median change in bIOP(v2) following surgery was below 1 mmHg at follow-up stages and the interquartile range was smaller than both bIOP(v1) and CVS-IOP. The bIOP(v2) algorithm performs better than bIOP(v1) and CVS-IOP in terms of correlation with CCT and age. The bIOP(v2) also demonstrated the smallest variation after LASIK and SMILE refractive surgeries indicating improved ability to compensate for geometrical changes.
DOI: 10.6084/m9.figshare.25034684.v1
title: Processed data for the single-cell RNA sequencing study of mouse testes aging

description: The zip files are the gene expression matrix files for the single cell RNA sequencing study of mouse testes aging conducted at Gangcai Xie's Lab from Nantong University, which were formatted to be easily loaded by common single cell analyzing tools, such as Seurat and Scanpy. And the .rds format file is the Seurat object file generated in our study, which contains the cell annotation information presented in our paper. The young group (3 months old): TY1, TY2, TY3, and the old group (23 months old): TO1, TO2, TO3. The paper related to this dataset will be accessible at https://doi.org/10.1038/s41598-024-65710-0.
DOI: 10.6084/m9.figshare.13187506.v1
title: New species of <i>Tulasnella</i> associated with Australian terrestrial orchids in the Cryptostylidinae and Drakaeinae

description: Many orchids have an obligate relationship with <i>Tulasnella</i> mycorrhizal fungi for seed germination and support into adulthood. Despite the importance of <i>Tulasnella</i> as mycorrhizal partners, many species remain undescribed. Here, we use multiple sequence locus phylogenetic analyses to delimit and describe six new <i>Tulasnella</i> species associated with Australian terrestrial orchids from the subtribes Cryptostylidinae and Drakaeinae. Five of the new species, <i>Tulasnella australiensis, T. occidentalis, T. punctata, T. densa</i>, and <i>T. concentrica</i>, all associate with <i>Cryptostylis</i> (Cryptostylidinae), whereas <i>T. rosea</i> associates with <i>Spiculaea ciliata</i> (Drakaeinae). Isolates representing <i>T. australiensis</i> were previously also reported in association with <i>Arthrochilus</i> (Drakaeinae). All newly described <i>Tulasnella</i> species were delimited by phylogenetic analyses of four loci (nuc rDNA internal transcribed spacer region ITS1-5.8S-ITS2 [ITS], <i>C14436</i> [ATP synthase], <i>C4102</i> [glutamate synthase], and mt 16S rDNA [mtLSU]). The pairwise sequence divergence between species for the ITS region ranged from 5.6% to 25.2%, and the maximum sequence divergence within the newly described species ranged from 1.64% to 4.97%. There was a gap in the distribution of within- and between-species pairwise divergences in the region of 4–6%, with only one within-species value of 4.97% (for two <i>T. australiensis</i> isolates) and one between-species value of 5.6% (involving an isolate of <i>T. occidentalis</i>) falling within this region. Based on fluorescence staining, all six new <i>Tulasnella</i> species are binucleate and have septate, cylindrical hyphae. There was some subtle variation in culture morphology, but colony diameter as measured on 3MN+vitamin medium after 6 wk of growth did not differ among species. However, <i>T. australiensis</i> grew significantly (<i>P</i> &lt; 0.02) slower than others on ½ FIM and ¼ potato dextrose agar (PDA) media. Formal description of these <i>Tulasnella</i> species contributes significantly to documentation of <i>Tulasnella</i> diversity and provides names and delimitations to underpin further research on the fungi and their relationships with orchids.
DOI: 10.6084/m9.figshare.5121430.v1
title: Supplementary Material for: Molecular and Physiological Responses to Juvenile Traumatic Brain Injury: Focus on Growth and Metabolism

description: Traumatic brain injury (TBI), one of the most frequent causes of neurologic and neurobehavioral morbidity in the pediatric population, can result in lifelong challenges not only for patients, but also for their families. Survivors of a brain injury experienced during childhood – when the brain is undergoing a period of rapid development – frequently experience unique challenges as the consequences of their injuries are overlaid on normal developmental changes. Experimental studies have significantly advanced our understanding of the mechanisms and underlying molecular underpinnings of the injury response and recovery process following a TBI in the developing brain. In this paper, normal and TBI-related alterations in growth, development and metabolism are comprehensively reviewed in the postweanling/juvenile age range in the rat (postnatal days 21–60). As part of this review, TBI-related changes in gene expression are presented, with a focus on the injury-induced alterations related to cerebral growth and metabolism, and discussed in the context of existing literature related to physiological and behavioral responses to experimental TBI. Increasing evidence from the existing literature and from our own gene microarray data indicates that molecular responses related to growth, development and metabolism may play a particularly important role in the injury response and the recovery trajectory following developmental TBI. While gene expression analysis shows many of these changes occur at the level of transcription, a comprehensive review of other studies suggests that the control of metabolic substrates may preferentially be regulated through changes in transporters and enzymatic activity. The interrelation between cellular metabolism and activity-dependent neuroplasticity shows great promise as an area for future study for an optimal translation of experimental data to clinical TBI, with the ultimate goal of guiding therapeutic interventions.
DOI: 10.6084/m9.figshare.1278881.v2
title: Figure 1 Theory ISQ dimensions and student learning.tif

description: Data Paper:<br>Measuring the Quality of Individual Lectures: Development and Validation The Instructional Skills Questionnaire (ISQ)
DOI: 10.6084/m9.figshare.22765112.v2
title: This DepMap release contains data from CRISPR knockout screens from project Achilles, as well as genomic characterization data from the CCLE project. For more information, please see README.txt.

description: This DepMap release contains data from CRISPR knockout screens from project Achilles, as well as genomic characterization data from the CCLE project.<br>For more information, please see README.txt.
DOI: 10.6084/m9.figshare.27132339.v1
title: <b>PPG Signals Subject Files (Format: .txt) (Only PPG signal data)</b>

description: Dataset AssociationThis dataset belongs to the project "PPG Signals and Cholesterol Data: Repository for the Validation of Total Blood Cholesterol Estimation Methods" where different PPG signals are presented together with cholesterol information of the subjects. This is done with the objective of validating tools or methods for estimating the total blood cholesterol level from the PPG signal.Dataset DescriptionThis dataset contains files in .txt (Text file) format, corresponding to the PPG signal of 46 subjects. Subject data such as age, sex, and cholesterol are not found in the files presented here. If these data are needed in the records, they can be located in the following dataset within this project "PPG Signals & Cholesterol Data Subject Files (Format: .txt)". Other data such as weight, height and whether the subject is on medication can be found in the excel document included in the project.Dataset format.txt (Text file)Other formats available in the project:.csv (Comma-separated values).json (JavaScript Object Notation).mat (MATLAB file)
DOI: 10.6084/m9.figshare.14112080.v1
title: TCR of lung

description: Lung cancer is the leading cause of cancer-related deaths worldwide, and its occurrence is related to the accumulation of gene mutations and immune escape of the tumor. Sequencing of the T cell receptor (TCR) repertoire can reveal the immunosurveillance status of the tumor microenvironment, which is related to tumor escape and immunotherapy. This study aimed to determine the characteristics and clinical significance of the TCR repertoire in lung cancer. To comprehensively profile the TCR repertoire, results from high-throughput sequencing of samples from 93 Chinese lung cancer patients were analyzed. We found that the TCR clonality of tissues was related to smoking, with higher clonality in patients who had quit smoking for less than 1 year. As expected, TCR clonality was correlated with stages, and stage IV patients showed higher clonality than others. The correlation between TCR repertoire and epidermal growth factor receptor (EGFR) status was also investigated. EGFR non-L858R patients showed higher clonality and lower Shannon index than others, including EGFR L858R and EGFR wild-type patients. Further, we analyzed the TCR similarity metrics, that is, the TCR shared between postoperative peripheral blood and tissue, of patients with non-distant metastasis lung cancer. A similar trend was found, with EGFR L858R patients having lower OLI and MOI. Moreover, OLI showed a positive correlation with several clinical characteristics, including the tumor mutational burden of tissues and maximum somatic allele frequency of blood; and OLI showed negative correlation with ratio of CD4+CD28+/CD4+ and ratio of CD8+CD28+/CD8+. In conclusion, TCR clonality and TCR similarity metrics were correlated with clinical characteristics of lung cancer patients, and differences in TCR clonality, Shannon index, and OLI across EGFR subtypes provide information for the potential understanding of the different response to immunotherapy in patients with different EGFR mutations.
DOI: 10.6084/m9.figshare.23997993.v1
title: Coronal Hole Detection Comparison Dataset

description: <b>Description:</b><br>Welcome to the "Coronal Hole Detection Comparison Dataset" hosted on Figshare. The dataset comprises 29 manually selected Solar Dynamics Observatory (SDO) images, and is accompanied by the coronal hole detection results from the most widely used automated detection schemes in the solar and heliospheric science community. This community dataset was created as part of the ISWAT Coronal Hole Boundary Working Team to support the comparison and evaluation of automated coronal hole detection schemes.<b>Dataset Details:</b><b>SDO Images:</b> The dataset consists of 29 SDO images (4k x 4k) observed between the years 2014 and 2019, spanning from maximum solar activity to the subsequent minimum. We provide all seven EUV wavebands ranging from 9.4 nm to 33.5 nm captured by the AIA instrument and the line-of-sight measurements of the photospheric magnetic field from the HMI instrument for each date. These images capture a wide range of appearances of coronal holes, presenting challenging scenarios.<b>Coronal Hole Labels:</b> Each image in the dataset is accompanied by manually assigned coronal hole labels, annotated according to the criteria outlined in Reiss et al. (2023). These labels serve as the ground truth for evaluating the accuracy of automated detection schemes in terms of event-based validation, as discussed in Section 4.4 of our publication.<b>Detection Results:</b> After performing basic preprocessing steps on level 1.0 data from the SDO data platform, we provided the complete dataset to 14 participating research teams and collected the resulting coronal hole detection results, which are included here.<b>Result Collage Images:</b> A comparison of the results from all 14 different automated detection schemes is provided as a PDF file for each of the dates.<b>Intended Usage:</b><br>Researchers and data scientists who are interested in advancing the field of automated coronal hole detection are encouraged to use this dataset for benchmarking and comparing their algorithms. The dataset is intended to serve as a common ground for evaluating algorithm performance and fostering collaboration within the community. <b>Citation:</b><br>If you use this dataset in your research, please cite the following reference: Reiss et al., "<i>A Community Dataset for Comparing Automated Coronal Hole Detection Scheme</i>," ApJS, 2023.<b>Contact Information:</b>Martin A. Reiss (Community Coordinated Modeling Center, NASA Goddard, USA): martin.a.reiss@outlook.comKarin Muglach (NASA Goddard, USA): karin.muglach@nasa.gov<b>Disclaimer:</b><br>While the dataset has been carefully curated and annotated, we do not guarantee the accuracy or completeness of the provided labels, and any findings or conclusions drawn from the dataset should be verified.<br><br>We hope that the "Automated Coronal Hole Detection Comparison Dataset" serves as a valuable resource for advancing automated coronal hole detection schemes.
DOI: 10.6084/m9.figshare.18910619.v5
title: DIRT data for forest soil carbon, nutrients and microbes

description: In this dataset, we collected 3193 observations from 166 forest DIRT (Detritus Input and Removal Treatment) experiments worldwide. This dataset includes four detritus treatments of litter addition, litter removal (aboveground litter excluded from plots), root removal (roots excluded from plots by trenching) and no inputs (removal of both litter and roots), and covers multiple variables of belowground process. Specifically, the variables include soil pH and bulk density, soil carbon and fractions, nutrients (nitrogen and phosphorus), microbial community (biomass and composition), soil respiration and soil organic matter decomposition. This dataset also includes site and treatment information of these DIRT experiments, such as, location, climatic factors (temperature and precipitation), soil types, litter input rates and total litter input, experimental durations, litter types (broadleaf, conifer, and mixed litter from broadleaf and conifer trees) and litter treatment modes. Treatment modes for aboveground litter refer to addition or removal of only fresh litterfall (fresh) or both fresh litterfall and forest floor material at the beginning (floor+fresh).<br>
DOI: 10.6084/m9.figshare.20954545.v1
title: Fig3B Luciferase Data AspRSLUC WT.csvDatasets for F1000 submission Circadian Clock Control of tRNA synthetases

description: Fig3B Luciferase Data AspRSLUC WT