cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13133/uniroma1/q9logj/ndklus
title: H2O_maxco2_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/vjbcod
title: H2O_minco2_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/x774zp
title: dust_minco2_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/zsrnuk
title: H2O_maxco2_3400.dat

description: :unav
DOI: 10.6084/m9.figshare.7204778.v1
title: table S2.doc from DNA methylation subpatterns at distinct regulatory regions in human early embryos

description: DNA methylation has been investigated for many years, but recent technologies have allowed for single-cell and single-base resolution DNA methylation datasets and more accurate assessment of DNA methylation dynamics at the key genomic regions that regulate gene expression in human early embryonic development. In this study, the region staring from upstream 20 kb to downstream 20 kb of RefSeq gene was selected and divided into 12 distinct regions (up20, up10, up5, up2, 5'UTR, exon, intron, 3'UTR, down2, down5, down10 and down20). The candidate promoter region (TSS ± 2 kb) was further divided into 20 consecutive subregions, which were termed bins. The DNA methylation dynamics of these regions were systematically analysed along with their effects on gene expression in human early embryos. The dynamic DNA methylation subpatterns at the distinct genomic regions with a focus on promoter regions were mapped. For the 12 distinct genomic regions, up2 and 5'UTR had the lowest DNA methylation levels and their methylation dynamics were different with other regions. The region 3'UTR had the highest DNA methylation levels, and the correlation analysis with gene expression proved that it was a feature of transcribed genes. For the 20 bins in promoter region, the CpG densities showed a normal distribution pattern, and the trend of the methylated CpG counts was inverse with the DNA methylation levels, especially for the bin 1 (downstream 200 bp of the TSS). Through the correlation analysis between DNA methylation and gene expression, current study finally revealed that, the region bin −4 to 6 (800 bp upstream to 1200 bp downstream of the TSS) was the best candidate for the promoter region in human early embryos, and bin 1 was the putative key regulator of gene activity. This study provided a global and high-resolution view of DNA methylation subpatterns at the distinct genomic regions in human early embryos.
DOI: 10.13133/uniroma1/q9logj/pbk5bk
title: H2O_minco2_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/rey88g
title: H2O_minco2_2200.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/taprgs
title: CO2_minco2_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/zfkvys
title: CO2_maxco2_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/zi0klj
title: dust_minco2_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/c6v39v
title: dust_maxco2_2200.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/dtyvpo
title: CO2_maxco2_2200.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/kbiyj7
title: dust_minco2_2200.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/qzwjfg
title: H2O_maxco2_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/rmfhbl
title: CO2_minco2_2200.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/vuqxgs
title: H2O_maxco2_2200.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/8byvzf
title: dust_minco2_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/ae0svh
title: CO2_minco2_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/kxnjl1
title: H2O_minco2_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/o9anpq
title: CO2_maxco2_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/uanp8v
title: dust_maxco2_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/2bh7w9
title: H2O_maxco2_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/6zsd3j
title: CO2_maxco2_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/9rbypm
title: CO2_minco2_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/vihx6z
title: dust_minco2_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/ytb38j
title: dust_maxco2_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/4bzr70
title: H2O_maxdust_2200.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/8vjdwy
title: H2O_minco2_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/9usjcu
title: mindust_2200.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/cgnuys
title: maxdust_2200.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/e8n2mc
title: CO2_maxdust_2200.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/mh6spz
title: CO2_mindust_2200.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/2wj12n
title: H2O_mindust_2200.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/byvzmr
title: mindust_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/lsny8r
title: H2O_maxdust_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/ocxp98
title: CO2_maxdust_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/p8mynk
title: maxdust_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/vhkksq
title: CO2_mindust_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/ahsjsf
title: CO2_maxdust_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/u2hwdx
title: H2O_mindust_2800.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/u6p62t
title: maxdust_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/vqdzon
title: H2O_mindust_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/zorpcp
title: H2O_maxdust_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/argzbu
title: mindust_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/g8kjh5
title: SPLD_Gravity.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/iqxmws
title: SPLD_Gravity.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/jv1xbw
title: SPLD_Gravity.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/rnzyw1
title: CO2_mindust_3400.dat

description: :unav
DOI: 10.13133/uniroma1/q9logj/wffg6c
title: SPLD_Gravity.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/2zosbj
title: SPLD_Density.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/7gftpq
title: SPLD_Density_Sigma.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/ds3vly
title: Gravity_Misfit.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/sxijdb
title: Gravity_Misfit.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/wzciiy
title: Gravity_Misfit.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/1pjatq
title: SPLD_Density.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/a9lsde
title: SPLD_Density_Sigma.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/fhpy8y
title: SPLD_Density_Sigma.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/np4mtu
title: SPLD_Density.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/vtrzmi
title: Gravity_Misfit.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/20jufp
title: Basal_Gravity.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/awaotr
title: Moho_Gravity.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/c9wulz
title: GMM3_Gravity.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/gomsf4
title: SPLD_Density.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/husdgy
title: SPLD_Density_Sigma.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/l8vsxg
title: GMM3_Gravity.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/h7o9ha
title: Moho_Gravity.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/s4wuxf
title: Moho_Gravity.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/szajhs
title: GMM3_Gravity.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/udx5ic
title: Moho_Gravity.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/urbgcw
title: Basal_Gravity.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/xemxnu
title: GMM3_Gravity.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/40lot2
title: CO2_minco2_2200.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/5wqezh
title: dust_maxco2_2200.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/pcsd7k
title: CO2_minco2_2200.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/u3f7um
title: Basal_Gravity.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/x6zicw
title: Basal_Gravity.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/3qpvlb
title: H2O_minco2_2200.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/oku49t
title: H2O_maxco2_2200.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/p9bneh
title: dust_minco2_2200.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/tnfvui
title: H2O_maxco2_2200.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/weiv97
title: dust_minco2_2200.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/z1rxqr
title: H2O_minco2_2200.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/4xm4v6
title: CO2_minco2_2200.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/d6ao4e
title: dust_maxco2_2200.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/psh33z
title: dust_minco2_2200.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/q5w5nz
title: dust_maxco2_2200.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/stotli
title: dust_maxco2_2200.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/sumtjz
title: CO2_maxco2_2200.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/28x2cp
title: H2O_maxco2_2200.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/ci3r2n
title: CO2_maxco2_2200.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/dtma1i
title: H2O_minco2_2200.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/hrixrs
title: H2O_minco2_2200.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/iwr35m
title: H2O_maxco2_2200.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/qprgqj
title: dust_minco2_2200.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/1wecdo
title: CO2_maxco2_2200.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/4qaxpr
title: dust_maxco2_2800.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/awzimv
title: dust_maxco2_2800.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/bmkzcw
title: CO2_minco2_2200.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/ddomkn
title: H2O_maxco2_2800.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/knju8g
title: CO2_maxco2_2200.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/0tlega
title: CO2_maxco2_2800.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/2lwm8f
title: dust_maxco2_2800.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/6dzio7
title: dust_minco2_2800.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/7ekfjn
title: dust_minco2_2800.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/z0pqvr
title: H2O_minco2_2800.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/7tn2b4
title: CO2_minco2_2800.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/jkgodo
title: CO2_maxco2_2800.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/kzndh6
title: dust_minco2_2800.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/lseogj
title: H2O_minco2_2800.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/wbh7pw
title: H2O_minco2_2800.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/yfdtwk
title: CO2_maxco2_2800.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/jkj1hp
title: H2O_maxco2_2800.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/kedaij
title: H2O_maxco2_2800.prj

description: :unav
DOI: 10.13133/uniroma1/q9logj/nsvjzh
title: CO2_minco2_2800.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/qwigcu
title: H2O_maxco2_2800.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/vpehz7
title: H2O_minco2_2800.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/vzwadv
title: CO2_minco2_2800.shp

description: :unav
DOI: 10.13133/uniroma1/q9logj/1j7a8y
title: dust_maxco2_3400.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/1tm0hu
title: CO2_minco2_2800.shx

description: :unav
DOI: 10.13133/uniroma1/q9logj/8bfxgp
title: CO2_maxco2_2800.dbf

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DOI: 10.13133/uniroma1/q9logj/gifyaw
title: dust_minco2_2800.shp

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DOI: 10.13133/uniroma1/q9logj/r4tl7m
title: dust_maxco2_2800.shx

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DOI: 10.13133/uniroma1/q9logj/bnt9iw
title: dust_maxco2_3400.prj

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DOI: 10.13133/uniroma1/q9logj/en05cs
title: H2O_maxco2_3400.prj

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DOI: 10.13133/uniroma1/q9logj/eswk05
title: H2O_minco2_3400.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/ft1ikg
title: CO2_minco2_3400.dbf

description: :unav
DOI: 10.13133/uniroma1/q9logj/gej079
title: dust_minco2_3400.shx

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DOI: 10.13133/uniroma1/q9logj/xrh3px
title: CO2_minco2_3400.shx

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DOI: 10.13133/uniroma1/q9logj/c6m93l
title: dust_minco2_3400.prj

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DOI: 10.13133/uniroma1/q9logj/dwzbqa
title: dust_minco2_3400.dbf

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DOI: 10.13133/uniroma1/q9logj/kfs9h0
title: dust_maxco2_3400.shp

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DOI: 10.13133/uniroma1/q9logj/la76vy
title: H2O_maxco2_3400.shx

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DOI: 10.13133/uniroma1/q9logj/tryuem
title: CO2_maxco2_3400.prj

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DOI: 10.13133/uniroma1/q9logj/twpwsj
title: H2O_minco2_3400.shx

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DOI: 10.13133/uniroma1/q9logj/84ohuq
title: dust_minco2_3400.shp

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DOI: 10.13133/uniroma1/q9logj/ie38sh
title: dust_maxco2_3400.shx

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DOI: 10.13133/uniroma1/q9logj/jlqqmz
title: H2O_minco2_3400.shp

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DOI: 10.13133/uniroma1/q9logj/tfnogc
title: H2O_maxco2_3400.dbf

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DOI: 10.13133/uniroma1/q9logj/xovo5a
title: CO2_maxco2_3400.shp

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DOI: 10.13133/uniroma1/q9logj/axpqxt
title: CO2_minco2_3400.prj

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DOI: 10.13133/uniroma1/q9logj/duizdq
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DOI: 10.13133/uniroma1/q9logj/qjtsgn
title: CO2_maxco2_3400.dbf

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DOI: 10.13133/uniroma1/q9logj/un20mx
title: H2O_maxco2_3400.shp

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DOI: 10.13133/uniroma1/q9logj/xzkhhx
title: H2O_minco2_3400.prj

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DOI: 10.13133/uniroma1/q9logj/dzmenu
title: H2O_maxco2_2200.dbf

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DOI: 10.13133/uniroma1/q9logj/g0nalp
title: H2O_maxco2_2200.shx

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DOI: 10.13133/uniroma1/q9logj/qwfinj
title: CO2_minco2_3400.shp

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DOI: 10.13133/uniroma1/q9logj/rpi1w5
title: CO2_minco2_2200.dbf

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DOI: 10.13133/uniroma1/q9logj/wd33hg
title: H2O_minco2_2200.shp

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DOI: 10.13133/uniroma1/q9logj/ya3yep
title: CO2_minco2_2200.shp

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DOI: 10.13133/uniroma1/q9logj/2mjfpw
title: CO2_maxco2_2200.shx

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DOI: 10.13133/uniroma1/q9logj/ayx3va
title: H2O_minco2_2200.prj

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DOI: 10.13133/uniroma1/q9logj/b1pqsp
title: H2O_maxco2_2200.prj

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DOI: 10.13133/uniroma1/q9logj/bwiaqq
title: dust_maxco2_2200.shp

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DOI: 10.13133/uniroma1/q9logj/nzgnbn
title: dust_maxco2_2200.shx

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DOI: 10.13133/uniroma1/q9logj/2swnbz
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DOI: 10.13133/uniroma1/q9logj/bnhtha
title: H2O_maxco2_2200.shp

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DOI: 10.13133/uniroma1/q9logj/mn2qgu
title: CO2_maxco2_2200.prj

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DOI: 10.13133/uniroma1/q9logj/sdecst
title: CO2_minco2_2200.shx

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DOI: 10.13133/uniroma1/q9logj/xb8rq1
title: dust_minco2_2200.shp

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DOI: 10.13133/uniroma1/q9logj/5minf3
title: CO2_maxco2_2200.shp

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DOI: 10.13133/uniroma1/q9logj/gh4wfo
title: H2O_minco2_2200.shx

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DOI: 10.13133/uniroma1/q9logj/lbssol
title: CO2_minco2_2200.prj

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DOI: 10.13133/uniroma1/q9logj/lr8dyc
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DOI: 10.13133/uniroma1/q9logj/wbh7fg
title: dust_minco2_2200.dbf

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DOI: 10.13133/uniroma1/q9logj/4ofkqc
title: dust_maxco2_2200.dbf

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DOI: 10.13133/uniroma1/q9logj/e7uuy1
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DOI: 10.13133/uniroma1/q9logj/eygmtz
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DOI: 10.13133/uniroma1/q9logj/iix1bc
title: dust_minco2_2200.shx

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DOI: 10.13133/uniroma1/q9logj/js6i2c
title: CO2_maxco2_2800.prj

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title: dust_minco2_2800.shp

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DOI: 10.13133/uniroma1/q9logj/16jkzg
title: H2O_maxco2_2800.prj

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DOI: 10.13133/uniroma1/q9logj/hpqsaq
title: dust_maxco2_2800.prj

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DOI: 10.25345/c5bn9xd7h
title: MassIVE MSV000094132 - Astrocyte and neuron cell surface proteomes
title: We developed, tested and validated a method to determine the cell surface proteomes (CSPs) of striatal astrocytes and neurons. We used this method to study the CSPs and how they change in mouse models of disorders that affect the striatum. We compared our data to postmortem human data to identify disease-relevant mechanisms.
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