cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25442/hku.23684694.v1
title: Supporting data for " Physics-informed deep learning reconstruction in medical imaging"

description: Using simulated data, one deep-learning QSM pipeline consisting of a background field removal network (POCSnet1) and a dipole inversion network (POCSnet2) was proposed. On COSMOS (N=1), results from both models were improved compared to those from other models evaluated, and the evaluations on clinical data were also performed. This pipeline was further developed into a deep learning-regularized, single-step QSM quantification model, SS-POCSnet. A data fidelity term based on a single-step model was iteratively applied with SS-POCSnet regularized susceptibility maps. On synthetic datasets (N=10), SS-POCSnet showed the best performance and also reduced the underestimation of susceptibility values in deep brain nuclei compared with other models considered. Furthermore, this model was sensitive to cerebral microbleed /calcification (N=24) and multiple sclerosis lesions (N=10), demonstrating its clinical applicability.
DOI: 10.25442/hku.23707704
title: Supporting data for "Syndecan4 (Sdc4) is a novel regulator in lipid metabolism and white adipose tissue browning"

description: The original data consists of three parts: Chapter 3, 4, and 5. The data in Chapter 3 primarily includes qPCR, Western blot, ELISA, H&E, genotyping, CLAMS, ORO staining, Seahorse, and other metabolic index detection. The raw data and analysis are presented in Excel, with naming examples such as Figure 3.12 E-HFD-energy expenditure. <br> The raw data for bioinformatics analysis in Chapter 4 is stored in Excel, and it is named, for example, "Figure 4.1-Group_HFD-WT-VS-HFD-KO_DE_anno". The in vivo experiments primarily include Free fatty acid and SCFA determination, Western blot, qPCR, and ORO. Each result corresponds to a separate folder. <br> The experiments in Chapter 5 mainly involve qPCR, Western blot, H&E staining, CLAMS, and ELISA. The raw data and corresponding analysis are stored in Excel, and the original images for H&E staining are located in their respective folders. <br>
DOI: 10.25442/hku.23707704.v1
title: Supporting data for "Syndecan4 (Sdc4) is a novel regulator in lipid metabolism and white adipose tissue browning"

description: The original data consists of three parts: Chapter 3, 4, and 5. The data in Chapter 3 primarily includes qPCR, Western blot, ELISA, H&E, genotyping, CLAMS, ORO staining, Seahorse, and other metabolic index detection. The raw data and analysis are presented in Excel, with naming examples such as Figure 3.12 E-HFD-energy expenditure. <br> The raw data for bioinformatics analysis in Chapter 4 is stored in Excel, and it is named, for example, "Figure 4.1-Group_HFD-WT-VS-HFD-KO_DE_anno". The in vivo experiments primarily include Free fatty acid and SCFA determination, Western blot, qPCR, and ORO. Each result corresponds to a separate folder. <br> The experiments in Chapter 5 mainly involve qPCR, Western blot, H&E staining, CLAMS, and ELISA. The raw data and corresponding analysis are stored in Excel, and the original images for H&E staining are located in their respective folders. <br>
DOI: 10.6084/m9.figshare.21823455.v61
title: The ReptileEvolution.com Project

description: Taxon exclusion is the number one problem currently vexing paleontology. The search for pterosaur, turtle, bat, snake, whale, reptile and tetrapod ancestors continues to unnecessarily befuddle paleontologists who continue to work from cherry-picked, textbook and traditional taxon lists that overlook and omit pertinent taxa. That’s why the large reptile tree (LRT), the nearly completely resolved cladogram at the heart of www.ReptileEvolution.com, includes 2212 taxa. Larger taxon numbers minimize taxon exclusion issues. Results indicate the simple act of adding taxa resolves all phylogenetic issues.
DOI: 10.5439/1991778
title: lblch2aeri (c1)

description: lblch2aeri
DOI: 10.5439/1991780
title: pblhtsonde1mcfarl (s1)

description: pblhtsonde1mcfarl
DOI: 10.5439/1991781
title: pblhtsondeyr1mcfarl (s1)

description: pblhtsondeyr1mcfarl
DOI: 10.5439/1991782
title: pblhtsondeyr1mcfarl (c1)

description: pblhtsondeyr1mcfarl
DOI: 10.5439/1991784
title: mettiptwr (b1)

description: The surface and tower meteorological instrumentation uses mainly conventional in situ sensors mounted on a tower to measure wind speed, wind direction, air temperature, dew point, and humidity. It also obtains barometric pressure, visibility, and precipitation data from sensors at or near the base of the tower. In addition, a chilled mirror hygrometer is used for comparison purposes.
DOI: 10.5439/1991785
title: snodep (a1)

description: The surface and tower meteorological instrumentation uses mainly conventional in situ sensors mounted on a tower to measure wind speed, wind direction, air temperature, dew point, and humidity. It also obtains barometric pressure, visibility, and precipitation data from sensors at or near the base of the tower. In addition, a chilled mirror hygrometer is used for comparison purposes.
DOI: 10.5439/1991786
title: mettiptwr (a1)

description: The surface and tower meteorological instrumentation uses mainly conventional in situ sensors mounted on a tower to measure wind speed, wind direction, air temperature, dew point, and humidity. It also obtains barometric pressure, visibility, and precipitation data from sensors at or near the base of the tower. In addition, a chilled mirror hygrometer is used for comparison purposes.
DOI: 10.5439/1991787
title: nfov (b1)

description: The narrow-field-of-view zenith radiometer (NFOV) is a ground-based radiometer that looks straight up. As the name states, the field of view of the instrument is narrow, thus permitting the measurement of the downwelling zenith radiance. The instrument outputs a time series of 1-sec observations of the zenith spectral radiance measured at a wavelength of 869 nm. Data from the instrument have many uses; for example, the internal structure of clouds can be characterized by examining a time series of the radiance data.
DOI: 10.57931/1991948
title: mosartwmpy sample input data; 1980 - 1985

description: Sample input data spanning the years 1980-1985 for running the `mosartwmpy` water routing and management model: https://github.com/IMMM-SFA/mosartwmpy. More information is available in the README.md. Changelog: v0.0.7: new reservoir files with corrected locations based on an exhaustive review by Dan Broman for the 9505 project; corresponding long term mean demand and flow files updated based on VIC4 simulations using Daymet forcing. v0.0.6: updates reservoir parameters to indicate which reservoirs should follow generic operating rules and which should follow ISTARF data-driven operating rules. v0.0.5: adds supporting files for running the Farmer Agent Based Model of adaptive water demand.
DOI: 10.57841/casdc.0001751
title: 地基增强系统框架网基准站原始观测数据
DOI: 10.5281/zenodo.7398018
title: Proximity effect in PbTe-Pb hybrid nanowire Josephson junctions

description: This repository contains the raw data and processing code of the paper "Proximity effect in PbTe-Pb hybrid nanowire Josephson junctions".
DOI: 10.5281/zenodo.7398019
title: Proximity effect in PbTe-Pb hybrid nanowire Josephson junctions

description: This repository contains the raw data and processing code of the paper "Proximity effect in PbTe-Pb hybrid nanowire Josephson junctions".
DOI: 10.5281/zenodo.8180806
title: Proximity effect in PbTe-Pb hybrid nanowire Josephson junctions

description: This repository contains the raw data and processing code of the paper "Proximity effect in PbTe-Pb hybrid nanowire Josephson junctions".
DOI: 10.25439/rmt.15072009
title: Global Healthy and Sustainable City Indicator Study Collaboration - 25 Cities spatial indicators datasets

description: Output data prepared for analysis of 25 diverse global cities by the Global Healthy and Sustainable City-Indicator Collaboration study, published in The <em>Lancet Global Health</em> Series on urban design, transport, and health. 2022. https://www.thelancet.com/series/urban-design-2022 <br> Boeing, G. <em>et al.</em> (2022) ‘Using open data and open-source software to develop spatial indicators of urban design and transport features for achieving healthy and sustainable cities’, <em>The Lancet Global Health</em>, 10(6), pp. e907–e918. Available at: https://doi.org/10.1016/S2214-109X(22)00072-9.<br> Data outputs were generated through use of the global-indicators software tool, designed for this study and available from: https://github.com/global-healthy-liveable-cities/global-indicators <br> Further detail on the methods used is provided in the following publication: <br> Liu, S., Higgs, C., Arundel, J., Boeing, G., Cerdera, N., Moctezuma, D., Cerin, E., Adlakha, D., Lowe, M. and Giles-Corti, B. (2021), A Generalized Framework for Measuring Pedestrian Accessibility around the World Using Open Data. Geogr Anal. https://doi.org/10.1111/gean.12290 <br> The study made use of OpenStreetMap, Global Human Settlements and custom data, and is made available under the Open Database License: http://opendatacommons.org/licenses/odbl/1.0/. Any rights in individual contents of the database are licensed under the Database Contents License: http://opendatacommons.org/licenses/dbcl/1.0/<br> <br>
DOI: 10.25439/rmt.15072009.v3
title: Global Healthy and Sustainable City Indicator Study Collaboration - 25 Cities spatial indicators datasets

description: Output data prepared for analysis of 25 diverse global cities by the Global Healthy and Sustainable City-Indicator Collaboration study, published in The <em>Lancet Global Health</em> Series on urban design, transport, and health. 2022. https://www.thelancet.com/series/urban-design-2022 <br> Boeing, G. <em>et al.</em> (2022) ‘Using open data and open-source software to develop spatial indicators of urban design and transport features for achieving healthy and sustainable cities’, <em>The Lancet Global Health</em>, 10(6), pp. e907–e918. Available at: https://doi.org/10.1016/S2214-109X(22)00072-9.<br> Data outputs were generated through use of the global-indicators software tool, designed for this study and available from: https://github.com/global-healthy-liveable-cities/global-indicators <br> Further detail on the methods used is provided in the following publication: <br> Liu, S., Higgs, C., Arundel, J., Boeing, G., Cerdera, N., Moctezuma, D., Cerin, E., Adlakha, D., Lowe, M. and Giles-Corti, B. (2021), A Generalized Framework for Measuring Pedestrian Accessibility around the World Using Open Data. Geogr Anal. https://doi.org/10.1111/gean.12290 <br> The study made use of OpenStreetMap, Global Human Settlements and custom data, and is made available under the Open Database License: http://opendatacommons.org/licenses/odbl/1.0/. Any rights in individual contents of the database are licensed under the Database Contents License: http://opendatacommons.org/licenses/dbcl/1.0/<br> <br>
DOI: 10.25439/rmt.15072009.v2
title: Global Healthy and Sustainable City Indicator Study Collaboration - 25 Cities spatial indicators datasets

description: Output data prepared for analysis of 25 diverse global cities by the Global Healthy and Sustainable City-Indicator Collaboration study, published in The <em>Lancet Global Health</em> Series on urban design, transport, and health. 2022. https://www.thelancet.com/series/urban-design-2022 <br> Data outputs were generated through use of the global-indicators software tool, designed for this study and available from: https://github.com/global-healthy-liveable-cities/global-indicators <br> Further detail on the methods used is provided in the following publication: <br> Liu, S., Higgs, C., Arundel, J., Boeing, G., Cerdera, N., Moctezuma, D., Cerin, E., Adlakha, D., Lowe, M. and Giles-Corti, B. (2021), A Generalized Framework for Measuring Pedestrian Accessibility around the World Using Open Data. Geogr Anal. https://doi.org/10.1111/gean.12290 <br> The study made use of OpenStreetMap, Global Human Settlements and custom data, and is made available under the Open Database License: http://opendatacommons.org/licenses/odbl/1.0/. Any rights in individual contents of the database are licensed under the Database Contents License: http://opendatacommons.org/licenses/dbcl/1.0/<br> <br>
DOI: 10.6084/m9.figshare.23740410.v1
title: Beta during sleep in PD Code/Data: v1.0725.2023

description: Code and source data for the Beta-sleep paper. [uploaded in 0725.2023]
DOI: 10.6084/m9.figshare.23716653
title: Pore-scale simulation code and experiment results for permeability evolution of HBS by Yingli Xia

description: Pore-scale simulation process and results;seepage experiment results <br>
DOI: 10.6084/m9.figshare.23716653.v1
title: Pore-scale simulation code and experiment results for permeability evolution of HBS by Yingli Xia

description: Pore-scale simulation process and results;seepage experiment results <br>
DOI: 10.25345/c5s46hg94
title: MassIVE MSV000092518 - Pyoverdine molecular networking
title: Sixteen pyoverdine analogues, differing in the residue at the terminal Thr position, produced by metagenomic domain substitution of NRPS domains into the second module of PvdD
DOI: 10.6084/m9.figshare.23740413
title: The genome assembly and annotation data of <em>Abelmoschus esculentus</em>

description: Genome assembly and annotation results of <em>Abelmoschus esculentus</em>
DOI: 10.6084/m9.figshare.23740413.v1
title: The genome assembly and annotation data of <em>Abelmoschus esculentus</em>

description: Genome assembly and annotation results of <em>Abelmoschus esculentus</em>
DOI: 10.25442/hku.23640156
title: Supporting data for "Seismic performance of steel and BFRP bar reinforced concrete shear walls"

description: The dataset record pertains to the RC shear wall test conducted in the thesis. It consists of three files that correspond to Specimen1, Specimen2, and Specimen3 mentioned in the thesis. These files contain data related to the test, including the time of the test indicated by the data time. The strain gauge data is represented by m230-m261, the LVDT data is represented by m285-m309, and the actuator data is represented by D311-D316.
DOI: 10.3886/e154721v1-140394
title: Investigating the impact of at-home learning on secondary school aged children with ADHD: a qualitative study.

description: Students with ADHD can benefit from at-home learning in terms of managing their symptoms, however lockdown restrictions due to the pandemic are having negative impacts on the student population. This study was designed to ascertain how students with ADHD have been impacted by at-home learning under lockdown restrictions. An interpretative phenomenological analysis was conducted using semi-structured interviews from students, parents and teaching staff. These interviews were used to identify three main themes (anxiety caused by at-home learning, change in social interaction and academic impact of at-home learning) that best identified the participants experiences. The results suggested that whilst supportive home environments helped students with ADHD to better manage their symptoms, social anxiety was a significant problem and not all schools allowed students with ADHD to take full advantage of at-home learning for their students with ADHD.
description: Secondary School age children who experienced at-home learning during the lockdown of the Covid pandemic in 2020/2021.
DOI: 10.6084/m9.figshare.19382550
title: Additional file 1 of Evidence for the impacts of agroforestry on ecosystem services and human well-being in high-income countries: a systematic map

description: Additional file 1. List of High-Income Countries and Lending Groups (according to the 2018 World Bank classification [15]).
DOI: 10.6084/m9.figshare.19382550.v1
title: Additional file 1 of Evidence for the impacts of agroforestry on ecosystem services and human well-being in high-income countries: a systematic map

description: Additional file 1. List of High-Income Countries and Lending Groups (according to the 2018 World Bank classification [15]).
DOI: 10.6084/m9.figshare.19382553
title: Additional file 2 of Evidence for the impacts of agroforestry on ecosystem services and human well-being in high-income countries: a systematic map

description: Additional file 2. ROSES for Systematic Map Reports. Version 1.0.
DOI: 10.6084/m9.figshare.19382553.v1
title: Additional file 2 of Evidence for the impacts of agroforestry on ecosystem services and human well-being in high-income countries: a systematic map

description: Additional file 2. ROSES for Systematic Map Reports. Version 1.0.
DOI: 10.6084/m9.figshare.19382556
title: Additional file 3 of Evidence for the impacts of agroforestry on ecosystem services and human well-being in high-income countries: a systematic map

description: Additional file 3. This file contains the exact search strings used, dates of searches, and number of articles returned for each bibliographic database searched.
DOI: 10.6084/m9.figshare.19382556.v1
title: Additional file 3 of Evidence for the impacts of agroforestry on ecosystem services and human well-being in high-income countries: a systematic map

description: Additional file 3. This file contains the exact search strings used, dates of searches, and number of articles returned for each bibliographic database searched.
DOI: 10.6084/m9.figshare.19382559
title: Additional file 4 of Evidence for the impacts of agroforestry on ecosystem services and human well-being in high-income countries: a systematic map

description: Additional file 4. This file contains the list of websites, the URLs, the number of articles identified, and notes on the search and screening process from relevant organizations that were searched for the grey literature search.
DOI: 10.6084/m9.figshare.19382559.v1
title: Additional file 4 of Evidence for the impacts of agroforestry on ecosystem services and human well-being in high-income countries: a systematic map

description: Additional file 4. This file contains the list of websites, the URLs, the number of articles identified, and notes on the search and screening process from relevant organizations that were searched for the grey literature search.
DOI: 10.6084/m9.figshare.19382562
title: Additional file 5 of Evidence for the impacts of agroforestry on ecosystem services and human well-being in high-income countries: a systematic map

description: Additional file 5. This file contains the data extraction spreadsheet with information on each of the included studies for the high-income country systematic map of the impacts of agroforestry.
DOI: 10.6084/m9.figshare.19382562.v1
title: Additional file 5 of Evidence for the impacts of agroforestry on ecosystem services and human well-being in high-income countries: a systematic map

description: Additional file 5. This file contains the data extraction spreadsheet with information on each of the included studies for the high-income country systematic map of the impacts of agroforestry.
DOI: 10.6084/m9.figshare.19382565
title: Additional file 6 of Evidence for the impacts of agroforestry on ecosystem services and human well-being in high-income countries: a systematic map

description: Additional file 6. This additional file contains the list of excluded studies from the full text screening.
DOI: 10.6084/m9.figshare.19382565.v1
title: Additional file 6 of Evidence for the impacts of agroforestry on ecosystem services and human well-being in high-income countries: a systematic map

description: Additional file 6. This additional file contains the list of excluded studies from the full text screening.
DOI: 10.6084/m9.figshare.23740652
title: Additional file 1 of Backbone assignment and inhibitor binding studies of IL-33 mutants by NMR spectroscopy

description: Additional file 1. Table 1. Resonance assignment of IL-33 (117 to 270) C208S, C227A, C232A, and C259S mutant. Table 2. Resonance assignment of IL-33 (117 to 270) C208S, C227A, C232A, C259S, and E269C mutant. Table 3. Resonance assignment of IL-33 (117 to 270) C259A mutant.
DOI: 10.6084/m9.figshare.23740652.v1
title: Additional file 1 of Backbone assignment and inhibitor binding studies of IL-33 mutants by NMR spectroscopy

description: Additional file 1. Table 1. Resonance assignment of IL-33 (117 to 270) C208S, C227A, C232A, and C259S mutant. Table 2. Resonance assignment of IL-33 (117 to 270) C208S, C227A, C232A, C259S, and E269C mutant. Table 3. Resonance assignment of IL-33 (117 to 270) C259A mutant.
DOI: 10.6084/m9.figshare.12150930.v1
title: Additional file 2 of What are the effects of flow-regime changes on fish productivity in temperate regions? A systematic map

description: Additional file 2. Lists of articles excluded on the basis of full-text assessment with reasons for exclusion and unobtainable articles. Separate lists of articles excluded on the basis of full-text assessment and articles that were unobtainable.
DOI: 10.6084/m9.figshare.12150930
title: Additional file 2 of What are the effects of flow-regime changes on fish productivity in temperate regions? A systematic map

description: Additional file 2. Lists of articles excluded on the basis of full-text assessment with reasons for exclusion and unobtainable articles. Separate lists of articles excluded on the basis of full-text assessment and articles that were unobtainable.
DOI: 10.6084/m9.figshare.12150945
title: Additional file 4 of What are the effects of flow-regime changes on fish productivity in temperate regions? A systematic map

description: Additional file 4. Systematic map database. Contains the coding (extracted data) for all articles/studies included in the map. Includes a description of the coding form, the actual coding of all articles/studies, and a codes sheet.
DOI: 10.6084/m9.figshare.24559687.v1
title: Teratomas_in_immune_deficient_and_proficient_mice.fastq.gz

description: Immune evasion CRISPR screening in immuno-deficient and -proficient mice.
DOI: 10.6084/m9.figshare.23708925
title: Comparative Analysis of Pathological Characteristics and Prognostic Outcomes in Malignant Thyroid Tumors with Single and Co-existing <i>RAS</i> Mutations

description: Background: The implications of RAS mutations in malignant thyroid tumors are under scrutiny, focusing on prevalence, clinicopathological features, and prognosis. Methods: Centers include patients with malignant thyroid tumors from the TCGA, ICGC, MSKCC, and a multi-center thyroid cancer cohort in China. Pubmed/MEDLINE and Embase libraries were included in the systematic review. The differences in demography, clinical pathology, and prognosis of four distinct mutation groups ("non-mutation, single RAS mutation, driver mutation, and RAS co-mutation") were analyzed. Results: 21,370 patients with thyroid tumors who underwent RAS mutation testing were included. The overall frequency of RAS mutations was 19.34% (NRAS:12.94%&gt;HRAS:6.61%&gt;KRAS:5.00%). RAS co-mutations were more prevalent in tumors with lower differentiation levels. Importantly, RAS co-mutation, but not single RAS mutation increased the risk of Distant Metastasis (OR=12.28; 95%CI,3.19-47.25; P&lt;0.001), Advanced AJCC Stage (OR=4.60; 95%CI,1.91-11.08; P=0.001), Overall Survival (OS) (HR=2.90; 95%CI,1.63-5.13; P&lt;0.001), and Progression-free Survival (PFS) (HR=6.77; 95%CI,6.77-18.87; P&lt;0.001) compared with the non-mutation group. We also found the driver mutation group exhibited a higher risk of Extrathyroidal Extension, Advanced Tumor Stage, Lymph Node Metastasis, Distant Metastasis, Advanced AJCC Stage, OS, and PFS. Conclusions: RAS co-mutations might be the main contributor to malignant clinicopathological characteristics or prognosis, single RAS mutation not.