cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5821272
title: Effects of surgery start time on postoperative cortisol, inflammatory cytokines, and hospital day in hip surgery

description: Effects of surgery start time on postoperative cortisol, inflammatory cytokines, and hospital day in hip surgery
DOI: 10.6084/m9.figshare.5821272.v1
title: Effects of surgery start time on postoperative cortisol, inflammatory cytokines, and hospital day in hip surgery

description: Effects of surgery start time on postoperative cortisol, inflammatory cytokines, and hospital day in hip surgery
DOI: 10.6084/m9.figshare.5821269
title: Reduced cognitive function, increased blood-brain-barrier transport and inflammatory responses, and altered brain metabolites in LDLr -/-and C57BL/6 mice fed a western diet

description: Recent work suggests that diet affects brain metabolism thereby impacting cognitive function. Our objective was to determine if a western diet altered brain metabolism, increased blood-brain barrier (BBB) transport and inflammation, and induced cognitive impairment in C57BL/6 (WT) mice and low-density lipoprotein receptor null (LDLr -/-) mice, a model of hyperlipidemia and cognitive decline. We show that a western diet and LDLr -/- moderately influence cognitive processes as assessed by Y-maze and radial arm water maze. Also, western diet significantly increased BBB transport, as well as microvessel factor VIII in LDLr -/- and microglia IBA1 staining in WT, both indicators of activation and neuroinflammation. Interestingly, LDLr -/- mice had a significant increase in <sup>18</sup>F- fluorodeoxyglucose uptake irrespective of diet and brain <sup>1</sup>H-magnetic resonance spectroscopy showed increased lactate and lipid moieties. Metabolic assessments of whole mouse brain by GC/MS and LC/MS/MS showed that a western diet altered brain TCA cycle and β-oxidation intermediates, levels of amino acids, and complex lipid levels and elevated proinflammatory lipid mediators. Our study reveals that the western diet has multiple impacts on brain metabolism, physiology, and altered cognitive function that likely manifest via multiple cellular pathways.
DOI: 10.6084/m9.figshare.5821269.v1
title: Reduced cognitive function, increased blood-brain-barrier transport and inflammatory responses, and altered brain metabolites in LDLr -/-and C57BL/6 mice fed a western diet

description: Recent work suggests that diet affects brain metabolism thereby impacting cognitive function. Our objective was to determine if a western diet altered brain metabolism, increased blood-brain barrier (BBB) transport and inflammation, and induced cognitive impairment in C57BL/6 (WT) mice and low-density lipoprotein receptor null (LDLr -/-) mice, a model of hyperlipidemia and cognitive decline. We show that a western diet and LDLr -/- moderately influence cognitive processes as assessed by Y-maze and radial arm water maze. Also, western diet significantly increased BBB transport, as well as microvessel factor VIII in LDLr -/- and microglia IBA1 staining in WT, both indicators of activation and neuroinflammation. Interestingly, LDLr -/- mice had a significant increase in <sup>18</sup>F- fluorodeoxyglucose uptake irrespective of diet and brain <sup>1</sup>H-magnetic resonance spectroscopy showed increased lactate and lipid moieties. Metabolic assessments of whole mouse brain by GC/MS and LC/MS/MS showed that a western diet altered brain TCA cycle and β-oxidation intermediates, levels of amino acids, and complex lipid levels and elevated proinflammatory lipid mediators. Our study reveals that the western diet has multiple impacts on brain metabolism, physiology, and altered cognitive function that likely manifest via multiple cellular pathways.
DOI: 10.6084/m9.figshare.5821263
title: Robject files for tissues processed by Seurat

description: Each tissue's gene expression profile was processed by experts to annotate clusters of cells with biological functions. These are the Robjects created using Seurat to normalize and cluster the single-cell RNA-seq expression data.<br>Update 2018-03-27: Updated to resubmitted Robj<br>Update 2018-09-20: Updated to accepted Robj
DOI: 10.6084/m9.figshare.5821257
title: Fig7 data

description: This dataset is analysed and presented in this paper: <br>Timms<sup> </sup>W, RI Acworth, R Crane, CH Arns, JYArns, D McGeeney, G Rau, M Cuthbert (2017) The influence of syn-depositional macropores on the hydraulic integrity of thick alluvial clay aquitards <i>Water Resources Research</i>, revised submission.
DOI: 10.6084/m9.figshare.5821257.v1
title: Fig7 data

description: This dataset is analysed and presented in this paper: <br>Timms<sup> </sup>W, RI Acworth, R Crane, CH Arns, JYArns, D McGeeney, G Rau, M Cuthbert (2017) The influence of syn-depositional macropores on the hydraulic integrity of thick alluvial clay aquitards <i>Water Resources Research</i>, revised submission.
DOI: 10.17608/k6.auckland.5821236
title: Fiji, Qaranicagi Archaeological Ceramics

description: Archaeological sherd measurements associated with:<br>Cochrane, E. E. (2002). "Explaining the Prehistory of Ceramic Technology on Waya Island, Fiji." Archaeology in Oceania 37(1): 37-50.<br>Column Heads:<br>Sherd Type: 0=no observation (sherd less than 1.5cm in longest dimension)1=body2=rim only3=neck only4=rim and neck (lip identifiable)5=handle6=carination<br>Weight: in grams<br>Thickness 1, 2 and 3: in mm<br>Fire Core: 0=no observation <br>See template<br>[For possible use1=Incompletely Oxidized2=Oxidized3=Reduced]<br>Aplastics: dominant mode greater than 50% 0=no observation1=Calcerous2=Terrigenous3=mixed calcereous and terrigenous4=Shell5=Mixed (none dominant)<br>Aplastic Abundance:Ethan Cochrane:0=no observation1=few2=common3=abundant<br>Interior and Exterior Colour: 0=no observation1=7.5R +vlaue and chroma2=5R3=10R4=2.5YR5=5YR6=7.5YR7=10YR8=2.5Y9=5Y<br>Hardnesses: Moh's scale, value=lowest value that scratches the sherd, fingernail=2.5<br>Surface modification: 0=no observation1=plain2=PIPR3=PICH4=Incised5=Comb6=Punctate7=Shell8=Shell and Comb9=Applique10=Endtool notching11=wiped12=comb and end tool<br>Modification Location:0=no observation1=plain2=lip3=rim, exterior4=rim, interior5=rim, interior and ext.6=neck, exterior7=neck, interior8=body<br>Organic Residues: 0=no observation1=absent2=present, interior3=present, exterior4=present, both surfaces<br>Rim Orientation: 0=no observation1=direct2=inverted<br>Rim Profile: 0=no observation1=parallel2=thinned3=thickened4=interior thickened5=exterior thickened<br>Lip Shape: 0=no observation1=rounded2=squared3=pointed<br>For additional information (e.g., site designations) see:<br>Cochrane, E. E. (2009). The Evolutionary Archaeology of Ceramic Diversity in Ancient Fiji. Oxford, Archaeopress.<br>
DOI: 10.17608/k6.auckland.5821236.v1
title: Qaranicagi Archaeological Ceramics

description: Archaeological sherd measurements associated with:<br>Cochrane, E. E. (2002). "Explaining the Prehistory of Ceramic Technology on Waya Island, Fiji." Archaeology in Oceania 37(1): 37-50.<br>Column Heads:<br>Sherd Type: 0=no observation (sherd less than 1.5cm in longest dimension)1=body2=rim only3=neck only4=rim and neck (lip identifiable)5=handle6=carination<br>Weight: in grams<br>Thickness 1, 2 and 3: in mm<br>Fire Core: 0=no observation <br>See template<br>[For possible use1=Incompletely Oxidized2=Oxidized3=Reduced]<br>Aplastics: dominant mode greater than 50% 0=no observation1=Calcerous2=Terrigenous3=mixed calcereous and terrigenous4=Shell5=Mixed (none dominant)<br>Aplastic Abundance:Ethan Cochrane:0=no observation1=few2=common3=abundant<br>Interior and Exterior Colour: 0=no observation1=7.5R +vlaue and chroma2=5R3=10R4=2.5YR5=5YR6=7.5YR7=10YR8=2.5Y9=5Y<br>Hardnesses: Moh's scale, value=lowest value that scratches the sherd, fingernail=2.5<br>Surface modification: 0=no observation1=plain2=PIPR3=PICH4=Incised5=Comb6=Punctate7=Shell8=Shell and Comb9=Applique10=Endtool notching11=wiped12=comb and end tool<br>Modification Location:0=no observation1=plain2=lip3=rim, exterior4=rim, interior5=rim, interior and ext.6=neck, exterior7=neck, interior8=body<br>Organic Residues: 0=no observation1=absent2=present, interior3=present, exterior4=present, both surfaces<br>Rim Orientation: 0=no observation1=direct2=inverted<br>Rim Profile: 0=no observation1=parallel2=thinned3=thickened4=interior thickened5=exterior thickened<br>Lip Shape: 0=no observation1=rounded2=squared3=pointed<br>For additional information (e.g., site designations) see:<br>Cochrane, E. E. (2009). The Evolutionary Archaeology of Ceramic Diversity in Ancient Fiji. Oxford, Archaeopress.<br>
DOI: 10.6084/m9.figshare.5821224
title: Atmosphere 0.1 Impactor 0.5 core 1

description: Simulation of a planet collision
DOI: 10.6084/m9.figshare.5821224.v1
title: Atmosphere 0.1 Impactor 0.5 core 1

description: Simulation of a planet collision
DOI: 10.6084/m9.figshare.5821194
title: Applying network theory to animal movements to identify properties of landscape space use

description: Data from: <strong>Bastille-Rousseau, G., </strong><strong>Douglas-Hamilton, I., Blake, S., Northurp, J., Wittemyer, G. (Accepted) </strong><b>Applying network theory to animal movements to identify properties of landscape space use. Ecological applications</b>
DOI: 10.6084/m9.figshare.5821194.v2
title: Applying network theory to animal movements to identify properties of landscape space use

description: Data from: <strong>Bastille-Rousseau, G., </strong><strong>Douglas-Hamilton, I., Blake, S., Northurp, J., Wittemyer, G. (Accepted) </strong><b>Applying network theory to animal movements to identify properties of landscape space use. Ecological applications</b>
DOI: 10.6084/m9.figshare.5821194.v1
title: Applying network theory to animal movements to identify properties of landscape space use

description: Data from: <strong>Bastille-Rousseau, G., </strong><strong>Douglas-Hamilton, I., Blake, S., Northurp, J., Wittemyer, G. (Accepted) </strong><b>Applying network theory to animal movements to identify properties of landscape space use. Ecological applications</b>
DOI: 10.6084/m9.figshare.5821179
title: Visualization5.avi

description: A variable optical step generated by an ethanoate sample.
DOI: 10.6084/m9.figshare.5821176
title: entrainment3df_case3.tar.gzaa

description: DNS data for entrainment in forced turbulence case 3 - part a
DOI: 10.6084/m9.figshare.5821173
title: entrainment3df_case3.tar.gzac

description: DNS data for entrainment in forced turbulence case 3 - part c
DOI: 10.6084/m9.figshare.5821173.v1
title: entrainment3df_case3.tar.gzac

description: DNS data for entrainment in forced turbulence case 3 - part c
DOI: 10.6084/m9.figshare.5821170
title: entrainment3df_case3.tar.gzab

description: DNS data for entrainment in forced turbulence case 3 - part b
DOI: 10.6084/m9.figshare.5821170.v1
title: entrainment3df_case3.tar.gzab

description: DNS data for entrainment in forced turbulence case 3 - part b
DOI: 10.6084/m9.figshare.5821167
title: Visualization4.avi

description: An optical step generated by an ethanoate sample and its corresponding unwrapped phase.
DOI: 10.6084/m9.figshare.5821158
title: Visualization3.avi

description: An optical step generated by an ethanoate sample.
DOI: 10.6084/m9.figshare.5821143
title: Visualization2.avi

description: Optical results of a constant wavefront tilt and an ethanoate sample and its corresponding unwrapped phase
DOI: 10.6084/m9.figshare.5821128
title: Atmosphere 0.1 Impactor 0.4 core 1

description: Simulation of a planet collision
DOI: 10.6084/m9.figshare.5821128.v1
title: Atmosphere 0.1 Impactor 0.4 core 1

description: Simulation of a planet collision
DOI: 10.6084/m9.figshare.5821125
title: Visualization1.avi

description: Optical results of a constant wavefront tilt and an ethanoate sample.
DOI: 10.6084/m9.figshare.5821122
title: entrainment3df_case2.tar.gzac

description: DNS data of entrainment in forced turbulence for case 2 - part c
DOI: 10.6084/m9.figshare.5821119
title: entrainment3df_case2.tar.gzab

description: DNS data of entrainment in forced turbulence for case 2 - part b
DOI: 10.6084/m9.figshare.5821122.v1
title: entrainment3df_case2.tar.gzac

description: DNS data of entrainment in forced turbulence for case 2 - part c
DOI: 10.6084/m9.figshare.5821119.v1
title: entrainment3df_case2.tar.gzab

description: DNS data of entrainment in forced turbulence for case 2 - part b
DOI: 10.6084/m9.figshare.5821116
title: entrainment3df_case2.tar.gzaa

description: DNS data of entrainment in forced turbulence for case 2 - part a
DOI: 10.6084/m9.figshare.5821116.v1
title: entrainment3df_case2.tar.gzaa

description: DNS data of entrainment in forced turbulence for case 2 - part a
DOI: 10.6084/m9.figshare.5821110
title: Gender differences in authorships are not associated with publication bias in an evolutionary journal

description: A lower number of published papers and the accompanying reduced visibility of female within research fields compared to male scientists contributes to the loss of talented women from senior academic positions. The reasons for these authorship gender-differences is unclear, but one reason is a bias in the editorial and review process of scientific journals. In this study, we investigated whether there was publication bias according to gender in the Journal of Evolutionary Biology. We found female first-authors were six times less likely to be named as the corresponding author than male first-authors, and female first-authors were more likely to be displaced as corresponding authors by female co-authors than were male first-authors. We found an under-representation of female first- and last-authors compared to baseline populations of members of ESEB and of Evolutionary Biology faculty at the world top-10 universities for the Life Sciences. Our results show gender differences in patterns of authorship, but suggest that the peer review process at JEB is predominately gender-and location-neutral and not a contributing factor to differences in authorship.<br>
DOI: 10.6084/m9.figshare.5821110.v1
title: Gender differences in authorships are not associated with publication bias in an evolutionary journal

description: A lower number of published papers and the accompanying reduced visibility of female within research fields compared to male scientists contributes to the loss of talented women from senior academic positions. The reasons for these authorship gender-differences is unclear, but one reason is a bias in the editorial and review process of scientific journals. In this study, we investigated whether there was publication bias according to gender in the Journal of Evolutionary Biology. We found female first-authors were six times less likely to be named as the corresponding author than male first-authors, and female first-authors were more likely to be displaced as corresponding authors by female co-authors than were male first-authors. We found an under-representation of female first- and last-authors compared to baseline populations of members of ESEB and of Evolutionary Biology faculty at the world top-10 universities for the Life Sciences. Our results show gender differences in patterns of authorship, but suggest that the peer review process at JEB is predominately gender-and location-neutral and not a contributing factor to differences in authorship.<br>
DOI: 10.17608/k6.auckland.5821107
title: Generating Colour Names: The ‘roloc’ Package for R

description: This report introduces the ‘roloc’ package for R, which provides functions for converting colour specifications into colour names.
DOI: 10.17608/k6.auckland.5821107.v1
title: Generating Colour Names: The ‘roloc’ Package for R

description: This report introduces the ‘roloc’ package for R, which provides functions for converting colour specifications into colour names.
DOI: 10.6084/m9.figshare.5821086
title: entrainment3df_case1.tar.gzaa

description: <pre><b>DNS data in forced turbulence for case 1-part a</b></pre>
DOI: 10.6084/m9.figshare.5821086.v1
title: entrainment3df_case1.tar.gzaa

description: <pre><b>DNS data in forced turbulence for case 1-part a</b></pre>
DOI: 10.6084/m9.figshare.5821083
title: entrainment3df_case1.tar.gzab

description: <pre><b>DNS data in forced turbulence for case 1-part b</b></pre>
DOI: 10.6084/m9.figshare.5821083.v1
title: entrainment3df_case1.tar.gzab

description: <pre><b>DNS data in forced turbulence for case 1-part b</b></pre>
DOI: 10.6084/m9.figshare.5821071
title: Turbulence as the main driver of resuspension in oscillatory flow through vegetation

description: Records of velocity and suspended sediment concentration obtained from multiple ADVs and OBSs as described in Tinoco & Coco 2018, JGR-Earth Surface. <br>
DOI: 10.6084/m9.figshare.5820987
title: entrainment3dd_case3.tar.gzaa

description: DNS data for decaying turbulence case 3 - part a
DOI: 10.6084/m9.figshare.5820987.v1
title: entrainment3dd_case3.tar.gzaa

description: DNS data for decaying turbulence case 3 - part a
DOI: 10.6084/m9.figshare.5820984
title: entrainment3dd_case3.tar.gzac

description: DNS data for decaying turbulence case 3 - part c
DOI: 10.6084/m9.figshare.5820984.v1
title: entrainment3dd_case3.tar.gzac

description: DNS data for decaying turbulence case 3 - part c
DOI: 10.6084/m9.figshare.5820981
title: entrainment3dd_case3.tar.gzab

description: DNS data for decaying turbulence case 3 - part b
DOI: 10.6084/m9.figshare.5820981.v1
title: entrainment3dd_case3.tar.gzab

description: DNS data for decaying turbulence case 3 - part b
DOI: 10.6084/m9.figshare.5820978
title: Atmosphere 0.1 Impactor 0.3 core 1

description: Simulation of a planet collision
DOI: 10.6084/m9.figshare.5820978.v1
title: Atmosphere 0.1 Impactor 0.3 core 1

description: Simulation of a planet collision
DOI: 10.6084/m9.figshare.5820876
title: entrainment3dd_case2.tar.gzaa

description: DNS data for decaying turbulence case 2 - part a
DOI: 10.6084/m9.figshare.5820876.v1
title: entrainment3dd_case2.tar.gzaa

description: DNS data for decaying turbulence case 2 - part a
DOI: 10.6084/m9.figshare.5820873
title: entrainment3dd_case2.tar.gzac

description: DNS data for decaying turbulence case 2 - part c
DOI: 10.6084/m9.figshare.5820873.v1
title: entrainment3dd_case2.tar.gzac

description: DNS data for decaying turbulence case 2 - part c
DOI: 10.6084/m9.figshare.5820870
title: entrainment3dd_case2.tar.gzab

description: DNS data for decaying turbulence case 2 - part b
DOI: 10.6084/m9.figshare.5820870.v1
title: entrainment3dd_case2.tar.gzab

description: DNS data for decaying turbulence case 2 - part b
DOI: 10.6084/m9.figshare.5820753
title: Google sheets: CORE location data and figures

description: Google spreadsheet hosts dataset, because of map visualisations. This set focuses on the Geolocation "country codes" made available by publishers participating in sharing data and publications with the CORE service.<br><br>Available for public access here: https://docs.google.com/spreadsheets/d/10sYC5LteqMWy91as4J2yFBtjzkFkWMG-Djz0LHQkCqE/edit?usp=sharing
DOI: 10.6084/m9.figshare.5820753.v3
title: Google sheets: CORE location data and figures

description: Google spreadsheet hosts dataset, because of map visualisations. This set focuses on the Geolocation "country codes" made available by publishers participating in sharing data and publications with the CORE service.<br><br>Available for public access here: https://docs.google.com/spreadsheets/d/10sYC5LteqMWy91as4J2yFBtjzkFkWMG-Djz0LHQkCqE/edit?usp=sharing
DOI: 10.6084/m9.figshare.5820753.v2
title: Google sheets: CORE location data and figures

description: <b>THE DATA LINK IS CURRENT DISABLED UNTIL SUBMISSION AND PUBLICATION BY PREPRINT</b><br><br>Google spreadsheet hosts dataset, because of map visualisations. This set focuses on the Geolocation "country codes" made available by publishers participating in sharing data and publications with the CORE service.<br><br>Available for public access here: https://docs.google.com/spreadsheets/d/10sYC5LteqMWy91as4J2yFBtjzkFkWMG-Djz0LHQkCqE/edit?usp=sharing
DOI: 10.6084/m9.figshare.5820747
title: entrainment3dd_case1.tar.gzab

description: DNS data for decaying turbulence case 1, part-b
DOI: 10.6084/m9.figshare.5820744
title: entrainment3dd_case1.tar.gzaa

description: DNS data for decaying turbulence case 3
DOI: 10.6084/m9.figshare.5820744.v1
title: entrainment3dd_case1.tar.gzaa

description: DNS data for decaying turbulence case 3
DOI: 10.6084/m9.figshare.5820675
title: Agus Purwoko_ September 2017.pdf

description: Penelitian ini ditujukan untuk mengeksplorasi pengetahuan lokal masyarakat petani di kawasan DAS Ketahun bagian hulu (Kabupaten Lebong) dalam pengelolaan sumberdaya alam (hutan, Lahan persawahan dan lahan perkebunan). Penggalian data dan informasi dilakukan dengan metode survey melalui observasi dan wawancara terhadap 80 petani yang dipilih secara sengaja dari Desa Talang Ratu dan Kelurahan Rimbo Pengadang (Kecamatan Rimbo Pengadang) dan Desa Kota Donok dan Keluarahan Tes (Kecamatan Lebong Selatan) di Kabupaten Lebong. Analisa deskriptif dengan tabel frekuensi antar kategori (<i>univariate frequency distribution</i>) digunakan untuk pencapaian tujuan penelitian. Hasil penelitian pada tahun I ini menunjukkan bahwa: <i>Pertama</i>, sumber pengetahuan lokal masyarakat tani dalam pengelolaan SDA berasal dari gabungan antara sumber internal dan eksternal masyarakat. <i>Kedua</i>, pengetahuan lokal masyarakat dalam pengelolaan SDA yang bersifat <i>pragmatis</i>, antara lain: (1) reboisasi hutan lindung, (2) partisipasi masyarakat dalam menjaga fungsi hutan, dan (3) konservasi hutan dengan tanaman durian, cempedak dan petai, (4) menerapkan teknologi Revolusi Hijau meski belum sesuai dengan paket rekomendasi Balai Penyuluhan Pertanian setempat, (5) mempertahankan metode penanaman sisipan, (6) mempertahankan sistem wanatani di kebun, (7) menjaga dan melestarikan vegetasi pohon-pohon di sepanjang aliran sungai dan areal yang terjal, dan (8) membuat teras guludan pada kebunnya. <i>Ketiga</i>, beberapa pengetahuan lokal yang bersifat <i>supranatural</i>, antara lain: (1) larangan meludah, buang air kecil, berkata sembarangan, menebang pohon, mengambil kayu bakar atau benda apapun yang ada di lokasi yang dikeramatkan, (2) <i>n</i><i>gepoa</i> yakni proses pembakaran hutan yang dilakukan sedemikan hingga tidak terjadinya kebakaran yang lebih luas, (3) <i>k</i><i>iyeu setimbang </i><i>alam</i> adalah penyebutan untuk pohon yang berada di sepanjang aliran sungai yang dilarang untuk ditebang, dan (4) <i>m</i><i>undang </i><i>b</i><i>iniak</i> adalah ritual ketika akan turun ke sawah, dimana proses ini merupakan semacam ritual untuk menghormati Dewi Sri sehingga tanaman padi yang ditanam dapat tumbuh subur dan menghasilkan produk yang tinggi. Implikasi kebijakan yang dapat disarankan adalah (1) perlunya keterlibatan lembaga-lembaga di daerah agar membantu dalam pengelolaan dan pelestarian SDA dengan menggunakan pengetahuan lokal masyarakat dan (2) peningkatkan kemampuan masyarakat dalam menyaring berbagai teknologi yang berasal dari luar sistem sosial untuk menjaga keseimbangan alam dan lingkungan yang disesuaikan dengan pengetahuan lokal masyarakat.