cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0073457.10fu
title: SH0073457.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive5274.20251217.10
title: Enterococcus casseliflavus (ex Vaughn et al. 1979) Collins et al. 1984

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive5275.20250331.9.3
title: Enterococcus casseliflavus (ex Vaughn et al. 1979) Collins et al. 1984

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0073458.10fu
title: SH0073458.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive5275.20251217.10
title: Enterococcus casseliflavus (ex Vaughn et al. 1979) Collins et al. 1984

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive5276.20250331.9.3
title: Enterococcus casseliflavus (ex Vaughn et al. 1979) Collins et al. 1984

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive5276.20251217.10
title: Enterococcus casseliflavus (ex Vaughn et al. 1979) Collins et al. 1984

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0073459.10fu
title: SH0073459.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive5277.20250331.9.3
title: Enterococcus casseliflavus (ex Vaughn et al. 1979) Collins et al. 1984

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive5277.20251217.10
title: Enterococcus casseliflavus (ex Vaughn et al. 1979) Collins et al. 1984

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0073460.10fu
title: SH0073460.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.qbfqms
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Musophagiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((150 -90,180 -90,180 -60,150 -60,150 -90))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058938-250920141307145/datasets/export for details.
DOI: 10.15468/dl.dt3n9r
title: Occurrence Download

description: A dataset containing 3434 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Larix gmelinii (Rupr.) Kuzen.",
 "HasCoordinate is true",
 "Year is 2000,2023",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 3434 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009701-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8dtfrn
title: Occurrence Download

description: A dataset containing 13053 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Happywhale - Humpback whale in Indian Ocean"
 ]
}

 The dataset includes 13053 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009702-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9wjhm9
title: Occurrence Download

description: A dataset containing 189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((120.83133 25.60852,120.07031 23.94681,119.626 22.11865,120.86637 21.66971,121.2849 22.58627,122.44659 25.13644,120.83133 25.60852))",
 "OccurrenceStatus is Present",
 "TaxonKey is Pistacia chinensis Bunge",
 "Year 1993-2022"
 ]
}

 The dataset includes 189 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009703-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n4shxr
title: Occurrence Download

description: A dataset containing 108 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pseudacysta perseae (Heidemann, 1908)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 108 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009604-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qukdx2
title: Occurrence Download

description: A dataset containing 6149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "StateProvince is Tlaxcala",
 "TaxonKey is Mammalia"
 ]
}

 The dataset includes 6149 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009605-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vx54f9
title: Occurrence Download

description: A dataset containing 186659 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Junonia Hübner, 1819"
 ]
}

 The dataset includes 186659 records from 346 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009692-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fu2525
title: Occurrence Download

description: A dataset containing 13053 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Happywhale - Humpback whale in Indian Ocean"
 ]
}

 The dataset includes 13053 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009704-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7dc54f
title: Occurrence Download

description: A dataset containing 5371154 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "TaxonKey is Pandionidae",
 "Year is greater than or equal to 2010"
 ]
}

 The dataset includes 5371154 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009699-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rn3ef8
title: Occurrence Download

description: A dataset containing 3434 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Larix gmelinii (Rupr.) Kuzen.",
 "HasCoordinate is true",
 "Year is 2000,2023",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 3434 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009705-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u92fjn
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neostrengeria macropa (H.Milne Edwards, 1853)"
 ]
}

 The dataset includes 77 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009607-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ma6wte
title: Occurrence Download

description: A dataset containing 380 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Cathartes aura ruficollis Spix, 1824"
 ]
}

 The dataset includes 380 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009608-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x39466
title: Occurrence Download

description: A dataset containing 340 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Siphoninus phillyreae (Haliday, 1835)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 340 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009706-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gdcpcf
title: Occurrence Download

description: A dataset containing 10775 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((2.11937 41.26566,2.25909 41.37016,2.23429 41.42814,2.17058 41.49065,2.02102 41.43322,2.04076 41.39404,2.11937 41.26566))",
 "TaxonKey is Passer domesticus (Linnaeus, 1758)",
 "Year 2020-2025"
 ]
}

 The dataset includes 10775 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009610-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7k4e26
title: Occurrence Download

description: A dataset containing 2454 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Betula platyphylla Sukaczev",
 "HasCoordinate is true",
 "Year is 2000,2023",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 2454 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009611-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rhwx92
title: Occurrence Download

description: A dataset containing 2680 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Streptoprocne semicollaris (DeSaussure, 1859)"
 ]
}

 The dataset includes 2680 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009612-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eea5z8
title: Occurrence Download

description: A dataset containing 49285 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Rwanda",
 "DatasetKey is one of (Meise Botanic Garden Herbarium (BR), Naturalis Biodiversity Center (NL) - Botany, Royal Botanic Gardens, Kew - Herbarium Specimens, CABI Africa Invasive and Alien Species data, Global soil organisms, Tropicos MO Specimen Data, Herbarium of Namur, A global database for the distributions of crop wild relatives, Tropicos Specimens Non-MO)",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 49285 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009613-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8c2633
title: Occurrence Download

description: A dataset listing the 76639 species recorded in GBIF matching the query:
{
 "Country" : [
 "is Chinese Taipei"
 ]
}

 The dataset's 76639 records were derived from 1446 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009609-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17429971
title: Research Respondent Data

description: This is a dataset of Respondent Answer for Research Purposes titled with "THE EFFECT OF INFORMATION QUALITY, HUMAN-LIKE LANGUAGE STYLE, PRIVACY CONCERNS, AND AI-BASED CHATBOT INTERACTION ON CONSUMER TRUST IN THE E-COMMERCE WORLD"
DOI: 10.5281/zenodo.17429972
title: Research Respondent Data

description: This is a dataset of Respondent Answer for Research Purposes titled with "THE EFFECT OF INFORMATION QUALITY, HUMAN-LIKE LANGUAGE STYLE, PRIVACY CONCERNS, AND AI-BASED CHATBOT INTERACTION ON CONSUMER TRUST IN THE E-COMMERCE WORLD"
DOI: 10.5281/zenodo.17411942
title: MicroRAG: A Hybrid Language Model Retrieval-Augmented by Reference-Based Algorithms for Metagenomic contig Classification

description:  MicroRAG, an reference-guided retrieval-augmented language model for microbial contig sequence classification. MicroRAG combines multi-scale convolutional feature extraction, a fragment-aware transformer to capture intra-contig dependencies, and a retrieval-augmented generation mechanism that incorporates external reference databases. Evaluated on a large-scale, temporally partitioned benchmark spanning viruses, plasmids, prokaryotes, and microeukaryotes, MicroRAG achieves 18–25% performance gains across accuracy, precision, recall, F1, and AUPR compared with state-of-the-art methods. This strength is particularly pronounced on short contigs and imbalanced communities, a capability attributed to its retrieval and representation components, both demonstrated as indispensable by ablation analyses. Applications to fecal microbiota transplantation and marine metagenomes further reveal MicroRAG’s ability to capture plasmid dynamics linked to dysbiosis and detect ecologically specific viral signals. By bridging deep representation learning with reference-based retrieval, MicroRAG establishes a scalable and interpretable paradigm for metagenomic sequence analysis.
DOI: 10.5281/zenodo.17411941
title: MicroRAG: A Hybrid Language Model Retrieval-Augmented by Reference-Based Algorithms for Metagenomic contig Classification

description:  MicroRAG, an reference-guided retrieval-augmented language model for microbial contig sequence classification. MicroRAG combines multi-scale convolutional feature extraction, a fragment-aware transformer to capture intra-contig dependencies, and a retrieval-augmented generation mechanism that incorporates external reference databases. Evaluated on a large-scale, temporally partitioned benchmark spanning viruses, plasmids, prokaryotes, and microeukaryotes, MicroRAG achieves 18–25% performance gains across accuracy, precision, recall, F1, and AUPR compared with state-of-the-art methods. This strength is particularly pronounced on short contigs and imbalanced communities, a capability attributed to its retrieval and representation components, both demonstrated as indispensable by ablation analyses. Applications to fecal microbiota transplantation and marine metagenomes further reveal MicroRAG’s ability to capture plasmid dynamics linked to dysbiosis and detect ecologically specific viral signals. By bridging deep representation learning with reference-based retrieval, MicroRAG establishes a scalable and interpretable paradigm for metagenomic sequence analysis.
DOI: 10.15468/dl.x7rw2t
title: Occurrence Download

description: A dataset containing 408887 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Typha latifolia"
 ]
}

 The dataset includes 408887 records from 2277 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053818-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ayfrpn
title: Occurrence Download

description: A dataset containing 498687 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2025-02-14",
 "EventDate is less than or equal to 2025-03-16",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 }
 ]
}

 The dataset includes 498687 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018828-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-2314
title: Seiatel' istiny = The sower of truth, vol. 17, no. 11 (November 1932)

description: [description english/roman)] Monthly
DOI: 10.15468/dl.usu2v7
title: Occurrence Download

description: A dataset containing 12038415 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phalaris arundinacea L., Poa trivialis L., Prunus spinosa L., Quercus robur L., Ranunculus acris L., Rumex conglomeratus Murray, Rumex obtusifolius L., Trifolium repens L., Vicia hirsuta (L.) Gray, Calystegia sepium (L.) R.Br., Veronica chamaedrys L., Carex acutiformis Ehrh., Rubus caesius L., Salix fragilis L., Betula pubescens Ehrh., Caltha palustris L., Cirsium oleraceum (L.) Scop., Cornus sanguinea L., Epilobium tetragonum L., Eupatorium cannabinum L., Frangula alnus Mill., Glyceria fluitans (L.) R.Br., Hedera helix L., Humulus lupulus L., Lonicera periclymenum L., Polygonatum multiflorum (L.) All.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Geometry POLYGON((-11 34, 41 34, 41 72, -11 72, -11 34))",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 12038415 records from 4131 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019553-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57702/8zszs91r
title: UD Dataset v2.7

description: The UD Dataset v2.7 is a multilingual dataset for dependency parsing.
DOI: 10.57702/yjmnmjd4
title: Background CIFAR-10

description: The Background CIFAR-10 dataset is a subset of the CIFAR-10 dataset with images of objects from 10 different classes on a white background.
DOI: 10.57702/7m0kt7lv
title: OpenAssistant Conversations– Democratizing Large Language Model Alignment

description: OpenAssistant Conversations– Democratizing Large Language Model Alignment
DOI: 10.57702/u5qc5jag
title: Slot Attention

description: A dataset of videos of a robot interacting with blocks of different shapes and colors placed on a table in a simulation environment.
DOI: 10.57702/jw0oai39
title: Audio retrieval with natural language queries

description: The AudioCaps and Clotho datasets were used to build baselines for text-based audio retrieval.
DOI: 10.57702/x4pmuvbt
title: CIMT Argument Concreteness Dataset

description: The dataset is used for the evaluation of argument quality classification tasks, including concreteness, validity, and novelty.