cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/4v859ds9xg.1
title: Meat quality and Processed Cassava peel meal

description: Meat quality and carcass trait of broiler chickens fed cassava peel meal based diets and supplemented with additional methionine and lysine concentration at varying levels.
DOI: 10.17632/scmtmv8drj.1
title: The Holy Glance of Mother Mary, and a Mathematical Visualisation

description: This paper explores the enigmatic concept of the divine glance of Mother Mary and attempts a mathematical representation of this supernatural phenomenon. Inspired by the revelation to Saint Bridget about the overwhelming power of Mary's gaze, this study delves into the challenging task of symbolically modeling an action that transcends conventional physical and mathematical principles. Employing symbolic representations and analogies drawn from optics, dynamics, and calculus, the paper metaphorically interprets the instantaneous and powerful nature of Mary's glance. By symbolizing her glance as akin to the speed and intensity of light, equations and analogical models attempt to capture its transformative impact on malevolent forces and the instantaneous flight of demons. The research acknowledges the inherent limitations of conventional scientific approaches when confronted with divine or supernatural phenomena. While symbolic equations and visualizations through Python coding offer abstract narratives of celestial influence and the retreat of devils in response to Mary's gaze, they underscore the immeasurable essence of this divine intervention. Furthermore, the paper intertwines mathematical representation with the teachings of influential spiritual figures like Padre Pio and Louis de Montfort. Their writings on spiritual warfare, divine intervention, and Mary's pivotal role in guiding believers resonate with the symbolic representation of the divine glance, emphasizing the perpetual struggle between darkness and light. In conclusion, while this research seeks to mathematically symbolize the immeasurable influence of Mary's gaze, it remains an abstract contemplation beyond empirical grasp. This endeavor aims to inspire reflection on the transformative impact of divine intervention, symbolized by the gaze of the Blessed Virgin Mary, inviting contemplation across theological, spiritual, and mathematical realms. Keywords: Glance, Mary, Saint Bridget, Supernatural action, Divine intervention, Celestial forces, Padre Pio, Louis de Montfort, Spiritual warfare, Darkness and light, Python coding.
DOI: 10.17632/4bndtmf6z2.1
title: Financial and Interview Data regarding Model of Yogic Leadership

description: This data file is related to annual sales and profit of Patanjali Ayurved Limited, Patanjali Foods and Patanjali Food and Herbal Park along with content analysed data collected form interviews with Swami Ramdev, Acharya Balkrishna and their 100 team middle to top team members working with five major service areas-spiritual, health, education, entrepreneurship, and social, of Patanjali Group of Organizations (PGOs). This data is used to see annual financial growth patterns of PGOs and explore the most crucial factor behind success of PGOs.
DOI: 10.17632/4bndtmf6z2.2
title: Financial and Interview Data regarding Model of Yogic Leadership

description: This data file is related to annual sales and profit of Patanjali Ayurved Limited, Patanjali Foods and Patanjali Food and Herbal Park along with content analysed data collected from interviews with Swami Ramdev, Acharya Balkrishna and their 100 middle to top team members working with five major service areas-spiritual, health, education, entrepreneurship, and social, of Patanjali Group of Organizations (PGOs). This data is used to see annual financial growth patterns of PGOs and explore the most crucial factor behind success of PGOs. This data supported to build novel theoretical model of Yogic Leadership based on Srimadbhagvad Gita, cases, and personalities of founder and co-founder of PGOs.
DOI: 10.17632/4bndtmf6z2.3
title: Financial and Interview Data regarding Model of Yogic Leadership

description: This data file is related to annual sales and profit of Patanjali Ayurved Limited, Patanjali Foods and Patanjali Food and Herbal Park along with content analysed data collected from interviews with Swami Ramdev, Acharya Balkrishna and their 100 middle to top team members working with five major service areas-spiritual, health, education, entrepreneurship, and social, of Patanjali Group of Organizations (PGOs). This data is used to see annual financial growth patterns of PGOs and explore the most crucial factor behind success of PGOs. This data supported to build novel theoretical model of Yogic Leadership based on Srimadbhagvad Gita, cases, and personalities of founder and co-founder of PGOs.
DOI: 10.17632/vgjfjnh8gv.1
title: raw image data for "Resilient anatomy and local microplasticity of naïve and stress hematopoiesis "_26

description: Extended Data Figure 6.a Skull B.ims
DOI: 10.6084/m9.figshare.24718722
title: Lake model run pool

description: Pool of lake model simulation data drawn from in the Bayesian model.
DOI: 10.6084/m9.figshare.24718722.v1
title: Lake model run pool

description: Pool of lake model simulation data drawn from in the Bayesian model.
DOI: 10.6084/m9.figshare.24718716
title: Bayesian model output

description: Raw output (5 chains) from Bayesian model.
DOI: 10.6084/m9.figshare.24718716.v1
title: Bayesian model output

description: Raw output (5 chains) from Bayesian model.
DOI: 10.6084/m9.figshare.24718683
title: Characterization of atmospheric methane release in the outer Mackenzie River delta from biogenic and thermogenic sources. Data used in Table 1.

description: A .pdf file containing geolocated atmospheric CH<sub>4</sub> and CO<sub>2</sub> mixing ratios for the Mackenzie-Beaufort Delta region of the Northwest Territories, Canada. CH<sub>4</sub> and CO<sub>2</sub> values are in parts per million by volume (ppmv). All sample air was drawn from approximately 1 m above ground level. Gas mixing ratios were standardized to Ameriflux FB04306 breathing grade air (benchmarked to 0.5 ppb). Measurements at sites Pingo 3 and Wetland 1 were obtained by using a portable Li-Cor LI-7810 gas analyser in the field. The Li-Cor LI-7810 gas analyser has an accuracy of 0.25 ppb. Measurements at sites Pingo 1, Pingo 2, Wetland 2, Wetland 3, and Site 9 were collected by filling a 30 m coil of 4 mm inside diameter aluminum Synflex tubing while walking at a steady pace across the ground. Coils of tubing were purged with nitrogen and sealed prior to sampling. A constant flow rate of 20 standard cubic centimetres per minute (SCCM) was maintained by attaching a small pump and a flow controller to the coil of tubing. Air samples were analysed immediately on return from the field site by feeding the sample into a Picarro G2210i analyser at the same rate at which it was filled. The Picarro G2210i analyser is accurate to within 0.001 ppm CH<sub>4</sub>, and 1 ppm CO<sub>2</sub>.
DOI: 10.25919/cygg-dq77
title: Murray-Darling Basin Chezy Coefficients (selected reaches)

description: This collection was produced for the Murray Darling Basin Authority to address the longitudinal connectivity of the Murray Darling Basin. This work presents coefficients for the Chezy velocity equation to estimate river reach scale velocity for any desired value of stage within selected reaches of the MDB.
DOI: 10.57841/casdc.0003194
title: 原料预处理研究论文数据
DOI: 10.57841/casdc.0003195
title: 实用锂离子电容器稳定电化学工作电压窗的测定策略数据集
DOI: 10.6084/m9.figshare.24718647
title: Effects of different densities of <i>Caulerpa taxifolia</i> on symbiotic microbial communities of <i>Turbinaria peltata</i>

description: This study aimed to investigate the effects of different densities ofthe macroalga Caulerpa taxifolia on the physiology and associated microbiome of the coral Turbinaria peltata, and the effects of two interaction modes (direct and indirect contact) were also compared here.Coral nucleic acids were extracted using the TGuide S96 Magnetic Bead Method Genomic DNA Extraction Kit(DP812, Tiangen Biochemical Technology, Beijing, China).
DOI: 10.6084/m9.figshare.24718647.v1
title: Effects of different densities of <i>Caulerpa taxifolia</i> on symbiotic microbial communities of <i>Turbinaria peltata</i>

description: This study aimed to investigate the effects of different densities ofthe macroalga Caulerpa taxifolia on the physiology and associated microbiome of the coral Turbinaria peltata, and the effects of two interaction modes (direct and indirect contact) were also compared here.Coral nucleic acids were extracted using the TGuide S96 Magnetic Bead Method Genomic DNA Extraction Kit(DP812, Tiangen Biochemical Technology, Beijing, China).
DOI: 10.6084/m9.figshare.24129030
title: Phase of neural oscillations as a reference frame for attention-based routing in visual cortex

description: The data used to generate Figures 2, 3, 4, 5, 6, 7, S1, S2, S3, S4, S5, S6, S7, and S9 in our research article titled 'Phase of neural oscillations as a reference frame for attention-based routing in visual cortex.'
DOI: 10.6084/m9.figshare.24129030.v1
title: Phase of neural oscillations as a reference frame for attention-based routing in visual cortex

description: The data used to generate Figures 2B, 3A, 3B, 3C, 4A, 4B, 5, 6, 7A, S1, S2, S3, S4, S5, S6, and S8 in our research article titled 'Phase of neural oscillations as a reference frame for attention-based routing in visual cortex.'
DOI: 10.6084/m9.figshare.22249474.v2
title: Widespread INVs shape the genetic and phenotypic diversity in rice

description: Detected INVs from long sequencing dataset of 377 cultivated and wild rice accessions.
DOI: 10.6084/m9.figshare.22249474.v1
title: Widespread INVs shape the genetic and phenotypic diversity in rice

description: Detected INVs from long sequencing dataset of 377 cultivated and wild rice accessions.
DOI: 10.6084/m9.figshare.20765539
title: Cherry blossom and ginkgo leaf coloration phenology timing of China from 2009 to 2019 extracted from big data

description: This repository accompanies the manuscript <b>"Cherry blossom and ginkgo leaf coloration phenology dataset of China from 2009 to 2019 extracted from big data"</b> by Shenghong Wang, Haolong Liu, Xinyue Qin, Junhu Dai and <b>Jun Liu</b> *.Ground-based phenological observation data are the most accurate phenological monitoring data currently available. Making effective use of available information on social media to retrieve phenological data is of considerable value in alleviating the lack of phenological data in regions with missing observation sites. In this study, a logistic curve fitting method was developed to extract phenological data on specific species from social media data. After verifying the relationship between the site observation data and the temperature, timing data for two typical phenological phenomena in China, namely cherry blossom flowering in spring and ginkgo leaf coloration in autumn were reconstructed and published. The data availability is from 2010 to 2019 in 176 cities and 2009 to 2018 in 155 cities. This dataset is an effective supplement for existing phenological data, and this method also provides a reference for obtaining phenological data for specific species.The code for extract timing and data validation is available for download from the repository on GitHub at https://github.com/rebootcat/cherryGinkgoPhenology.
DOI: 10.6084/m9.figshare.20765539.v1
title: Cherry blossom and ginkgo leaf coloration phenology timing of China from 2009 to 2019 extracted from big data

description: This repository accompanies the manuscript <strong>"Cherry blossom and ginkgo leaf coloration phenology dataset of China from 2009 to 2019 extracted from big data"</strong> by Shenghong Wang, Haolong Liu, Xinyue Qin, Junhu Dai and <strong>Jun Liu</strong> *. <br> Ground-based phenological observation data are the most accurate phenological monitoring data currently available. Making effective use of available information on social media to retrieve phenological data is of considerable value in alleviating the lack of phenological data in regions with missing observation sites. In this study, a logistic curve fitting method was developed to extract phenological data on specific species from social media data. After verifying the relationship between the site observation data and the temperature, timing data for two typical phenological phenomena in China, namely cherry blossom flowering in spring and ginkgo leaf coloration in autumn were reconstructed and published. The data availability is from 2010 to 2019 in 176 cities and 2009 to 2018 in 155 cities. This dataset is an effective supplement for existing phenological data, and this method also provides a reference for obtaining phenological data for specific species.
DOI: 10.6084/m9.figshare.23064259
title: Role of complementarity-determining regions 1 and 3 in pathologic amyloid formation by human immunoglobulin κ1 light chains

description: Immunoglobulin light chain (LC) amyloidosis is a life-threatening disease complicated by vast numbers of patient-specific mutations. We explored 14 patient-derived and engineered proteins related to κ1-family germline genes IGKVLD-33*01 and IGKVLD-39*01. Hydrogen-deuterium exchange mass spectrometry analysis of conformational dynamics in recombinant LCs and their fragments was integrated with studies of thermal stability, proteolytic susceptibility, amyloid formation and amyloidogenic sequence propensity. The results were mapped on the structures of native and fibrillary proteins. Proteins from two κ1 subfamilies showed unexpected differences. Compared to their germline counterparts, amyloid LC related to IGKVLD-33*01 was less stable and formed amyloid faster, whereas amyloid LC related to IGKVLD-39*01 had similar stability and formed amyloid slower, suggesting different major factors influencing amyloidogenesis. In 33*01-related amyloid LC, these factors involved destabilization of the native structure and probable stabilization of amyloid. The atypical behavior of 39*01-related amyloid LC stemmed from increased dynamics/exposure of amyloidogenic segments in βC′V and βEV that could initiate aggregation and decreased dynamics/exposure near the Cys23–Cys88 disulfide. The results suggest distinct amyloidogenic pathways for closely related LCs and point to the complementarity-defining regions CDR1 and CDR3, linked via the conserved internal disulfide, as key factors in amyloid formation.
DOI: 10.6084/m9.figshare.23064259.v1
title: Role of complementarity-determining regions 1 and 3 in pathologic amyloid formation by human immunoglobulin κ1 light chains

description: Immunoglobulin light chain (LC) amyloidosis is a life-threatening disease complicated by vast numbers of patient-specific mutations. We explored 14 patient-derived and engineered proteins related to κ1-family germline genes IGKVLD-33*01 and IGKVLD-39*01. Hydrogen-deuterium exchange mass spectrometry analysis of conformational dynamics in recombinant LCs and their fragments was integrated with studies of thermal stability, proteolytic susceptibility, amyloid formation and amyloidogenic sequence propensity. The results were mapped on the structures of native and fibrillary proteins. Proteins from two κ1 subfamilies showed unexpected differences. Compared to their germline counterparts, amyloid LC related to IGKVLD-33*01 was less stable and formed amyloid faster, whereas amyloid LC related to IGKVLD-39*01 had similar stability and formed amyloid slower, suggesting different major factors influencing amyloidogenesis. In 33*01-related amyloid LC, these factors involved destabilization of the native structure and probable stabilization of amyloid. The atypical behavior of 39*01-related amyloid LC stemmed from increased dynamics/exposure of amyloidogenic segments in βC′V and βEV that could initiate aggregation and decreased dynamics/exposure near the Cys23–Cys88 disulfide. The results suggest distinct amyloidogenic pathways for closely related LCs and point to the complementarity-defining regions CDR1 and CDR3, linked via the conserved internal disulfide, as key factors in amyloid formation.
DOI: 10.6084/m9.figshare.23676912
title: Mapping cellular response to destabilized transthyretin reveals cell- and amyloidogenic protein-specific signatures

description: In ATTR amyloidosis, transthyretin (TTR) protein is secreted from the liver and deposited as toxic aggregates at downstream target tissues. Despite recent advancements in treatments for ATTR amyloidosis, the mechanisms underlying misfolded TTR-mediated cellular damage remain elusive. In an effort to define early events of TTR-associated stress, we exposed neuronal (SH-SY5Y) and cardiac (AC16) cells to wild-type and destabilized TTR variants (TTR<sup>V122I</sup> (p.V142I) and TTR<sup>L55P</sup> (p.L70P)) and performed transcriptional (RNAseq) and epigenetic (ATACseq) profiling. We subsequently compared TTR-responsive signatures to cells exposed to destabilized antibody light chain protein associated with AL amyloidosis as well as ER stressors (thapsigargin, heat shock). In doing so, we observed overlapping, yet distinct cell type- and amyloidogenic protein-specific signatures, suggesting unique responses to each amyloidogenic variant. Moreover, we identified chromatin level changes in AC16 cells exposed to mutant TTR that resolved upon pre-incubation with kinetic stabilizer tafamidis. Collectively, these data provide insight into the mechanisms underlying destabilized protein-mediated cellular damage and provide a robust resource representing cellular responses to aggregation-prone proteins and ER stress.
DOI: 10.6084/m9.figshare.23676912.v2
title: Mapping cellular response to destabilized transthyretin reveals cell- and amyloidogenic protein-specific signatures

description: In ATTR amyloidosis, transthyretin (TTR) protein is secreted from the liver and deposited as toxic aggregates at downstream target tissues. Despite recent advancements in treatments for ATTR amyloidosis, the mechanisms underlying misfolded TTR-mediated cellular damage remain elusive. In an effort to define early events of TTR-associated stress, we exposed neuronal (SH-SY5Y) and cardiac (AC16) cells to wild-type and destabilized TTR variants (TTR<sup>V122I</sup> (p.V142I) and TTR<sup>L55P</sup> (p.L70P)) and performed transcriptional (RNAseq) and epigenetic (ATACseq) profiling. We subsequently compared TTR-responsive signatures to cells exposed to destabilized antibody light chain protein associated with AL amyloidosis as well as ER stressors (thapsigargin, heat shock). In doing so, we observed overlapping, yet distinct cell type- and amyloidogenic protein-specific signatures, suggesting unique responses to each amyloidogenic variant. Moreover, we identified chromatin level changes in AC16 cells exposed to mutant TTR that resolved upon pre-incubation with kinetic stabilizer tafamidis. Collectively, these data provide insight into the mechanisms underlying destabilized protein-mediated cellular damage and provide a robust resource representing cellular responses to aggregation-prone proteins and ER stress.
DOI: 10.6084/m9.figshare.23592809
title: Comparison of cardiac involvement, extracardiac manifestations and outcomes between homozygote and heterozygote transthyretin p.Val142Ile (V122I) variant in patients with hereditary transthyretin amyloidosis: a cohort study

description: Hereditary transthyretin (ATTRv) p.Val142Ile (V122I) mutation is the most common inherited cause of cardiac amyloidosis and little is known about the phenotype and outcome of the rare homozygotic genotype. This study aimed to compare phenotypic characteristics and outcomes between heterozygous and homozygous patients with ATTRv V122I amyloidosis. This monocentric, observational, retrospective study conducted at the French National Referral Centre for Cardiac Amyloidosis (Henri Mondor Hospital, Créteil), described clinical, electrocardiographic, cardiac imaging features and prognostic data for patients with ATTRv V122I amyloidosis. Among 185 ATTRv V122I patients identified, 161 were heterozygous and 24 were homozygous. The homozygous frequency was 13%. Onset occured significantly earlier in the homozygotes compared to heterozygotes with earlier median age at diagnosis (67[63–71] years vs 76[70–79] years, <i>p</i> &lt; .001), age at first cardiac symptom (66[61–71] years vs 74[68–78] years, <i>p</i> &lt; .001) and age at first extracardiac symptom (59[52–70] years vs 69[62–75] years, <i>p</i> = .003). Homozygous ATTRv V122I was also associated with greater disease burden with earlier events (death, transplant or hospitalisation for acute heart failure) compared with heterozygotes (71[67–74] vs 78[76–79] years, <i>p</i> = .018). This rare, homozygous V122I cohort confirmed the earlier age of onset, death and cardiac events in this population.
DOI: 10.6084/m9.figshare.23592809.v1
title: Comparison of cardiac involvement, extracardiac manifestations and outcomes between homozygote and heterozygote transthyretin p.Val142Ile (V122I) variant in patients with hereditary transthyretin amyloidosis: a cohort study

description: Hereditary transthyretin (ATTRv) p.Val142Ile (V122I) mutation is the most common inherited cause of cardiac amyloidosis and little is known about the phenotype and outcome of the rare homozygotic genotype. This study aimed to compare phenotypic characteristics and outcomes between heterozygous and homozygous patients with ATTRv V122I amyloidosis. This monocentric, observational, retrospective study conducted at the French National Referral Centre for Cardiac Amyloidosis (Henri Mondor Hospital, Créteil), described clinical, electrocardiographic, cardiac imaging features and prognostic data for patients with ATTRv V122I amyloidosis. Among 185 ATTRv V122I patients identified, 161 were heterozygous and 24 were homozygous. The homozygous frequency was 13%. Onset occured significantly earlier in the homozygotes compared to heterozygotes with earlier median age at diagnosis (67[63–71] years vs 76[70–79] years, <i>p</i> &lt; .001), age at first cardiac symptom (66[61–71] years vs 74[68–78] years, <i>p</i> &lt; .001) and age at first extracardiac symptom (59[52–70] years vs 69[62–75] years, <i>p</i> = .003). Homozygous ATTRv V122I was also associated with greater disease burden with earlier events (death, transplant or hospitalisation for acute heart failure) compared with heterozygotes (71[67–74] vs 78[76–79] years, <i>p</i> = .018). This rare, homozygous V122I cohort confirmed the earlier age of onset, death and cardiac events in this population.
DOI: 10.6084/m9.figshare.23659821
title: Prevalence of amyloid in ligamentum flavum of patients with lumbar spinal stenosis

description: Transthyretin (ATTR) amyloidosis is often diagnosed in an advanced stage, when irreversible cardiac damage has occurred. Lumbar spinal stenosis (LSS) may precede cardiac ATTR amyloidosis by many years, offering the opportunity to detect ATTR already at the time of LSS surgery. We prospectively assessed the prevalence of ATTR in the ligamentum flavum by tissue biopsy in patients aged &gt;50 years undergoing surgery for LSS. Ligamentum flavum thickness was assessed pre-operatively on axial T2 magnetic resonance imaging (MRI) slices. Tissue samples from ligamentum flavum were screened centrally by Congo red staining and immunohistochemistry (IHC). Amyloid in the ligamentum flavum was detected in 74/94 patients (78.7%). IHC revealed ATTR in 61 (64.9%), whereas amyloid subtyping was inconclusive in 13 (13.8%). Mean thickness of ligamentum flavum was significantly higher at all levels in patients with amyloid (<i>p</i> &lt; .05). Patients with amyloid deposits were older (73.1 ± 9.2 vs. 64.6 ± 10.1 years, <i>p</i> = .01). No differences in sex, comorbidities, previous surgery for carpal tunnel syndrome or LSS were observed. Amyloid, mostly of the ATTR subtype, was found in four out of five patients with LSS and is associated with age and ligamentum flavum thickness. Histopathological work-up of ligamentum flavum might inform future decision making.