cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.wh70rxwjm
title: Data from: Climatic-niche evolution follows similar rules in plants and animals

description: Climatic niches are essential in determining where species can occur and
 how they will respond to climate change. However, it remains unclear if
 climatic-niche evolution is similar in plants and animals, or
 intrinsically different. For example, previous authors have proposed that
 plants have broader environmental tolerances than animals but are more
 sensitive to climate change. Here we test ten predictions about
 climatic-niche evolution in plants and animals, using phylogenetic and
 climatic data for 19 plant clades and 17 vertebrate clades (2087 species
 total). Surprisingly, we find that for all ten predictions, plants and
 animals show similar patterns. For example, in both groups, climatic
 niches change at similar mean rates and species have similar mean niche
 breadths, and niche breadths show similar relationships with latitude
 across groups. Our results suggest that there are general ‘rules’ of
 climatic-niche evolution that span plants and animals, despite the
 fundamental differences in their biology. These results may help to
 explain why plants and animals have similar responses to climate change
 and why they often have shared species richness patterns, biogeographic
 regions, biomes and biodiversity hotspots. 
description: The detailed methods are in the main text of the associated
 article: https://doi.org/10.1038/s41559-020-1158-x
description: Dataset S1. Results of PGLS regression between rates of climatic
 niche evolution and species divergence times Dataset
 S2. Results of PGLS regression between rates of climatic niche evolution
 and latitude for each species Dataset S3. Comparisions
 of niche rates between Bio5 and Bio6, and between Bio16 and Bio17 for each
 clade Dataset S4. Results of PGLS regression between
 niche breadths and other variables. Dateset S5. Details
 on plant and animal clades analyzed Dateset S6. Summary
 of climatic data of each species for the six climatic variables.
 Dateset S7. Model selection for climatic niche variables for rate
 estimation. Dataset S8. Rates of climatic niche
 evolution for each species Dataset S9. Data for six
 climatic niche breadth variables for each species
 Dataset S10. Phylogenetic trees for each of the 17 animal and 19
 plant clades, all plants, all animals, and all 2087 species
 Dataset S11. R codes used for this study.
 Dataset S12. Species localities and climatic raw data for this
 study.
DOI: 10.5061/dryad.np5hqbzps
title: Data from: Antihyperthermic treatment decreases perihematomal hypodensity

description: Objective: To investigate the effect of a decrease in body temperature in
 the first 24 hours over the perihematomal hypodensity and the outcome in
 patients with intracerebral hemorrhage (ICH). Methods: Retrospective study
 on a prospectively registered database. Among the 1100 patients, 795 met
 all the inclusion criteria. Temperature variations in the first 24 hours
 and perihematomal hypodensity (PHHD) were recorded. Patients with ³37.5 ˚C
 were treated with antihyperthermic drugs for at least 48 hours. The main
 objective was to determine the association between the temperature
 variation, the PHHD and the outcome at 3 months. Results: The decrease in
 temperature in the first 24 hours increased 11 fold the possibility of
 good outcome. Temperature decrease, lower PHHD volume and a good outcome
 were observed in 31.8% of the patients who received antihyperthermic
 treatment. Conclusion: The administration of early antihyperthermic
 treatment in patients with a spontaneous ICH with a basal axillary
 temperature ³37.5 ˚C resulted in good outcome in the third part of the
 treated patients.
description: Retrospective study on a prospectively registered database. Among
 the 1100 patients, 795 met all the inclusion criteria. Temperature
 variations in the first 24 hours and perihematomal hypodensity (PHHD) were
 recorded. Patients with ³37.5 ˚C were treated with antihyperthermic drugs
 for at least 48 hours. The main objective was to determine the association
 between the temperature variation, the PHHD and the outcome at 3
 months.
DOI: 10.5061/dryad.3tx95x6c4
title: Data from: Post-release movement and habitat selection of translocated pine martens Martes martes

description: Monitoring post-release establishment and movement of animals is important
 in evaluating conservation translocations. We translocated 39 wild pine
 martens Martes martes (19 females, 20 males) from Scotland to Wales. We
 released them into forested areas with no conspecifics in 2015, followed
 by a second release in 2016, alongside the previously released animals. We
 used radio-tracking to describe post-release movement and habitat
 selection. Six martens (15%) were not re-encountered during the tracking
 period, of which four undertook long-distance dispersal. For the remaining
 individuals, we characterised two phases of movement, ‘exploration’
 followed by ‘settlement’, that differed between releases. In the first
 release, martens remained in exploration phase for a mean of 14.5 days
 (SE=3.9 days) and settled at a mean distance of 8.7km (SE=1.8km) from
 release sites, whereas martens released in year two, alongside resident
 conspecifics, travelled away from release sites at a faster rate, settling
 sooner, at a mean of 6.6 days (SE=1.8 days), but further, at a mean
 distance of 14.0km (SE=1.7km) from release sites. Animals released in year
 one did not exhibit habitat preferences overall but within forests they
 favoured recently-felled areas, whereas animals released in year two
 showed strong selection for forested habitat but did not discriminate
 between forest types. The presence of conspecifics appeared influential
 for settlement and site fidelity of translocated martens and was
 associated with more rapid but more distant dispersal of the later cohort.
 Releases of animals in close proximity appeared to promote site fidelity
 and rapid establishment of ranges in the recipient environment.
description: Data were collected by radio-tracking pine martens that had
 been translocated from Scotland to Wales in 2015 and 2016.
 NB An update on 30 September 2020 corrected the locations data
 file with a complete set of locations of martens from both years of the
 study, where the original file contained only those from year
 one.
DOI: 10.5061/dryad.wh70rxwjn
title: Disentangling the assembly mechanisms of ant cuticular bacterial communities of two Amazonian ant species sharing a common arboreal nest

description: Bacteria living on the cuticle of ants are generally studied for their
 protective role against pathogens, especially in the clade of
 fungus-growing ants. However, little is known of the diversity of
 cuticular bacteria in other ant host species, as well as of the mechanisms
 leading to the composition of these communities. Here, we used 16S rRNA
 gene amplicon sequencing to study the influence of host species, species
 interactions, and the pool of bacteria from the environment on the
 assembly of cuticular bacterial communities on two phylogenetically
 distant Amazonian ant species that frequently nest together inside the
 roots system of epiphytic plants, Camponotus femoratus and Crematogaster
 levior. Our results show that 1) the vast majority of the bacterial
 community on the cuticle is shared with the nest, suggesting that most
 bacteria on the cuticle are acquired through environmental acquisition, 2)
 5.2% and 2.0% OTUs are respectively specific to Camponotus femoratus and
 Crematogaster levior, likely representing their respective core cuticular
 bacterial community, and 3) 3.6% of OTUs are shared between the two ant
 species. Additionally, mass spectrometry metabolomics analysis of
 metabolites on the cuticle of ants, which excludes the detection of
 cuticular hydrocarbons produced by the host, were conducted to evaluate
 correlations among bacterial OTUs and m/z ion mass. Although some positive
 and negative correlations are found, the cuticular chemical composition
 was weakly species specific which supports that cuticular bacterial
 communities are prominently environmentally acquired. Overall, our results
 suggest that the environment is the dominant source of bacteria found on
 the cuticle of ants.
DOI: 10.15468/dl.2pcwhx
title: Occurrence Download

description: A dataset containing 2519 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hippocampus abdominalis",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLatitude is less than 90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2015"
 ]
}

 The dataset includes 2519 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002224-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.08kprr4zs
title: Biomes as evolutionary arenas: convergence and conservatism in the trans-continental Succulent Biome

description: Aim: Biomes are globally-distributed, structurally and functionally
 similar vegetation units, but there is debate about whether these
 similarities are superficial, and about how biomes are defined and mapped.
 We propose that combined assessment of evolutionary convergence of plant
 functional traits and phylogenetic biome conservatism provides a useful
 approach for characterising biomes. We focus on the little-known succulent
 biome, a trans-continentally distributed assemblage of succulent-rich,
 drought-deciduous, fire-free forest, thicket and scrub vegetation as a
 useful exemplar biome to gain insights into these questions. Location:
 Global lowland (sub)tropics. Time period: Present. Major taxa studied:
 Angiosperms. Methods: We use a model-ensemble approach to model the
 distribution of 884 species of stem succulents, a plant functional group
 representing a striking example of evolutionary convergence. Using this
 model, phylogenies, and species occurrence data, we quantify phylogenetic
 succulent biome conservatism for ten non-succulent trans-continental plant
 clades including prominent elements of the succulent biome, representing
 over 800 species. Results: The geographical and climatic distributions of
 stem succulents provide an objective and quantitative proxy for mapping
 the distribution of the succulent biome. High fractions of succulent biome
 occupancy across continents suggest all ten non-succulent study clades are
 phylogenetically conserved to the succulent biome. Main conclusions: The
 trans-continental succulent and savanna biomes both show evolutionary
 convergence in key biome-related plant functional traits. However, in
 contrast to the savanna biome, which was apparently assembled via repeated
 local recruitment of lineages via biome shifts from adjacent biomes within
 continents, the succulent biome forms a coherent trans-continental
 evolutionary arena for drought-adapted tropical biome conserved lineages.
 Recognizing the important functional differences between the
 succulent-rich, grass-poor, fire-free succulent biome and the
 grass-dominated, succulent-poor, fire-prone savanna biome, and defining
 them as distinct seasonally dry tropical biomes, occupying essentially
 non-overlapping distributions, provides critical insights into tropical
 biodiversity and the extent of biome stasis versus biome shifting.
description: See 'Read me.rtf'.
DOI: 10.5061/dryad.wstqjq2h3
title: Data from: Personality traits change after an opportunity to mate

description: There is growing evidence that personality traits can change throughout
 the life course in humans and nonhuman animals. However, the proximate and
 ultimate causes of personality trait change are largely unknown,
 especially in adults. In a controlled, longitudinal experiment, we tested
 whether a key life event for adults – mating – can cause personality
 traits to change in female threespine sticklebacks. We confirmed
 that there are consistent individual differences in activity, sociability
 and risk taking, and then compared these personality traits among three
 groups of females: 1) control females; 2) females that physically mated;
 3) females that socially experienced courtship but did not mate. Both the
 physical experience of mating and the social experience of courtship
 caused females to become less willing to take risks and less social. To
 understand the proximate mechanisms underlying these changes, we measured
 levels of excreted steroids. Both the physical experience of mating and
 the social experience of courtship caused levels of dihydroxyprogesterone
 (17α,20β-P) to increase, and females with higher 17α,20β-P were less
 willing to take risks and less social. These results provide experimental
 evidence that personality traits and their underlying neuroendocrine
 correlates are influenced by formative social and life-history experiences
 well into adulthood.
description: Description of variables included in second tab of
 spreadsheet.
DOI: 10.5061/dryad.k6djh9w3s
title: Ancient orogenic and monsoon-driven assembly of the world's richest temperate alpine flora

description: Understanding how alpine biotas formed in response to historical
 environmental change may improve our ability to predict and mitigate the
 threats to alpine species posed by global warming. In the world's
 richest temperate alpine flora, that of the
 Tibet-Himalaya-Hengduan region, phylogenetic reconstructions of
 biome and geographic range evolution show that extant lineages emerged by
 the early Oligocene and diversified first in the Hengduan
 Mountains. By the early to middle Miocene, accelerated diversification and
 colonization of adjacent regions were likely driven jointly by
 mountain building and intensification of the Asian monsoon. The alpine
 flora of the Hengduan Mountains has continuously existed far longer than
 any other alpine flora on Earth and illustrates how modern biotas have
 been shaped by past geological and climatic events.
description: This upload contains the input data (delimitations of
 geographical range and biome, time-calibrated phylogenies) and analyses
 scripts as mentioned in the paper. The scripts in the
 “data_and_scripts” file are numbered according to the order of execution
 and named according to their main analyses which can be directly run in
 each file where the python scripts placed. The R and python codes in the
 plots file are used for plotting the figures presented in the
 paper.
DOI: 10.5061/dryad.r2280gb9h
title: Acoustic coordination by allied male dolphins in a cooperative context

description: Synchronous displays are hallmarks of many animal societies, ranging from
 the pulsing flashes of fireflies, to military marching in humans. Such
 displays are known to facilitate mate attraction or signal relationship
 quality. Across many taxa, synchronous male displays appear to be driven
 by competition, while synchronous displays in humans are thought to be
 unique in that they serve a cooperative function. Indeed, it is well
 established that human synchrony promotes cooperative endeavours and
 increases success in joint action tasks. We examine another system in
 which synchrony is tightly linked to cooperative behaviour. Male
 bottlenose dolphins form long-lasting, multi-level, cooperative alliances
 in which they engage in coordinated efforts to coerce single oestrus
 females. Previous work has revealed the importance of motor synchrony in
 dolphin alliance behaviour. Here, we demonstrate that allied dolphins will
 also engage in acoustic coordination, whereby males will actively match
 the production and tempo of their threat vocalisations when coercing
 females, and in some cases synchronise threat vocalization onset. This
 finding demonstrates that male dolphins are capable of acoustic
 coordination in a cooperative context and, moreover, suggests that both
 motor and acoustic coordination are features of coalitionary behaviour
 that are not limited to humans.
description: The publication provides a full description of how the data was
 collected and processed.
description: We  provide a summary of each of these files in the Supplementary
 Material PDF associated with the publication. We also include a 'read
 me' worksheet in the xlsx file and have included annotated R code to
 help with the data analysis interpretation.
DOI: 10.5061/dryad.2ngf1vhjq
title: The spread of a wild plant pathogen is driven by the road network

description: Spatial analyses of pathogen occurrence in their natural surroundings
 entail unique opportunities for assessing in vivo drivers of disease
 epidemiology. Such studies are however confronted by the complexity of the
 landscape driving epidemic spread and disease persistence. Since relevant
 information on how the landscape influences epidemiological dynamics is
 rarely available, simple spatial models of spread are often used. In the
 current study we demonstrate both how more complex transmission pathways
 could be incorpoted to epidemiological analyses and how this can offer
 novel insights into understanding disease spread across the landscape. Our
 study is focused on Podosphaera plantaginis, a powdery mildew pathogen
 that transmits from one host plant to another by wind-dispersed spores.
 Its host populations often reside next to roads and thus we hypothesize
 that the road network influences the epidemiology of P. plantaginis. To
 analyse the impact of roads on the transmission dynamics, we consider a
 spatial dataset on the presence-absence records on the pathogen collected
 from a fragmented landscape of host populations. Using both mechanistic
 transmission modeling and statistical modeling with road-network summary
 statistics as predictors, we conclude the evident role of the road network
 in the progression of the epidemics: a phenomena which is manifested both
 in the enhanced transmission along the roads and in infections typically
 occurring at the central hub locations of the road network. We also
 demonstrate how the road network affects the spread of the pathogen using
 simulations. Jointly our results highlight how human alteration of natural
 landscapes may increase disease spread.
description: Data has been collected with repeated presence-absence surveys in
 the pathosystem.
DOI: 10.5066/p90vu8en
title: Empirical data supporting a non-lethal method for characterizing the reproductive status and larval development of freshwater mussels (Bivalvia: Unionida)

description: Here we present the data collected during a mark-recapture study on freshwater mussels in Bruce Creek, Walton County, Florida. These data were used to evaluate the non-lethal impacts of a gill sampling protocol to assess gravidity of freshwater mussels. Data were collected every four weeks, or as weather permitted, to be able to monitor the reproductive status of each mussel every month of the year. The dataset includes unique tag numbers to identify specific female mussels captured and recaptured during this study. Genus and species were identified, and the gravidity status was evaluated for each individual mussel.
DOI: 10.5061/dryad.rjdfn2z75
title: Friend or foe? a parasitic wasp shifts the cost/benefit ratio in a nursery pollination system impacting plant fitness.

description: Nursery pollination systems are species interactions where pollinators
 also act as fruit/seed herbivores of the plant partner. While the plants
 depend on associated insects for pollination, the insects depend on the
 plants’ reproductive structures for larval development. The outcome of
 these interactions are thus placed on a gradient between mutualism and
 antagonism. Less specialised interactions may fluctuate along this
 gradient with the ecological context, where natural enemies can play an
 important role. We studied whether a natural enemy may impact the level of
 seed consumption of a nursery pollinator and how this in turn may
 influence individual plant fitness. We used the plant Silene latifolia,
 its herbivore Hadena bicruris, and its ectoparasitoid Bracon variator as a
 model plant-herbivore-natural enemy system. We investigated seed output,
 germination, survival, and flower production as proxies for individual
 plant fitness. We show that B. variator decreases the level of seed
 consumption by H. bicruris larvae which in turn increased seed output in
 S. latifolia plants, suggesting that parasitism by B. variator may act as
 a regulator in the system. However, our results also show that plant
 survival and flower production decrease with higher seed densities, and
 therefore an increase in seed output may be less beneficial for plant
 fitness than estimated from seed output alone. Our study should add
 another layer to the complex discussion of whether parasitoids contribute
 to plant fitness, as we show that taking simple proxies such as seed
 output is insufficient to determine the net effect of multitrophic
 interactions.
DOI: 10.5061/dryad.v9s4mw6rk
title: Data from: Octopamine increases individual and collective foraging in a neotropical stingless bee

description: The biogenic amine octopamine is a key modulator of individual and social
 behaviours in honeybees, but its role in the other group of highly
 eusocial bees, the stingless bees, remains largely unknown. In honeybees,
 octopamine mediates reward perception and affects a wide range of
 reward-seeking behaviours. Thus, we tested the hypothesis that octopamine
 increases individual foraging effort and collective food source
 exploitation in the neotropical stingless bee Plebeia droryana. Octopamine
 treatment caused a significant increase in the number of bees at
 artificial sucrose feeders and a 1.73-times higher individual foraging
 frequency. This effect can be explained by octopamine lowering the sucrose
 response threshold and, thus, increasing the perceived value of the food
 source. Our results demonstrate that, similar to its effects on honeybees,
 octopamine increases both individual and collective food source
 exploitation in P. droryana. This suggests that, despite having evolved
 many complex behaviours independently, OA might have similar regulatory
 effects on foraging behaviours in the two groups of highly eusocial bees.
DOI: 10.15468/dl.udjnxf
title: Occurrence Download

description: A dataset containing 69218 records in GBIF matching the query:
SELECT
 '425' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= 41.89415215079384
 AND decimalLatitude &lt;= 46.479780028101516
 AND decimalLongitude &gt;= -132.18235992772037
 AND decimalLongitude &lt;= -119.88149504725064
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 69218 records were derived from 309 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002207-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.