cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/7tyw5d3ccm
title: Artificial Intelligence to Model the COVID-19 Country Infection Trends

description: The Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE) organized an online repository (available at https://github.com/CSSEGISandData/COVID-19) with world-wide information on the absolute number of new confirmed, recovered, and death cases related to the COVID-19 disease (Coronavirus Disease 2019) caused by the Sars-CoV-2 virus (coronavirus). From the whole dataset, we have focused our analysis on the daily time series summaries, which contain the accumulated numbers of confirmed, death, and recovered cases for each country. Given some countries (e.g., Australia, Canada, and China) were reported at the province/state level, we have aggregated all those into a single time series. Another important modification in this dataset was performed to reorganize the daily records. Instead of using accumulated cases, we calculated the lagged differences between consecutive days. Besides the dataset, we also share our source code designed to cluster time series from different countries with similar behavior. Aiming at reproducing our results, run the source code "tree-clustering.R" Our main contribution is the function "calc.dend.dists" available in "distances-dendrogram.R" . For more information, visit our project https://tsviz.icmc.usp.br/covid19
DOI: 10.17632/z4pdjswrf9
title: Maize cultivar mixtures increase aboveground biomass and grain quality via trait dissimilarity and plasticity

description: Despite being visually cryptic, conspecific cultivar mixtures increase diversity and can increase productivity in agricultural systems. However, the mechanisms underlying this increase are unclear. In natural systems, differences in traits among species and among ecotypes correspond with diversity-increased productivity, but whether these attributes are important in cultivar mixtures is still unclear. To explore how cultivar mixtures affect agroecosystem productivity and the roles of trait dissimilarity, we conducted a four-year (2017-2020) field experiment in Northeast China with maize. The experimental treatments included eight single cultivar monocultures, four two-cultivar mixtures, one four-cultivar mixture, one six-cultivar mixture and one eight-cultivar mixture. Experiments were arranged in a randomized complete block design with three replications. Across the four years, all cultivar mixture combinations increased aboveground biomass and crude protein in grain by 7.0 % and 4.1 %, respectively, compared to the average of the eight monocultures. Grain yield, aboveground biomass, and grain crude protein in overyielding cultivar combinations increased by 2.0-9.0 %, 13.0-20.0 % and 4.8-10.7 %, respectively, compared to the average of the component monocultures of each mixture over four years. We calculated positive complementarity effects both for grain yield and aboveground biomass. All selection effects of cultivar mixtures were negative or neutral. There were strong positive correlations between complementarity effect and functional trait dissimilarity in cultivar mixtures, based on grain yields (P&lt; 0.010), aboveground biomass (P&lt; 0.001) and grain crude protein (P&lt; 0.010), whereas there were no such positive relationships between selection effects and functional trait dissimilarity. Moreover, we found higher levels of trait dissimilarity for shoot diameter, leaf area and specific leaf area in cultivar mixtures than in monocultures. Also, the shoot diameter, leaf area and specific leaf area of specific cultivars were higher in mixtures than in monocultures. Our results indicated that niche complementarity derives from functional trait dissimilarity, and strong complementarity effects correlate with greater functional trait dissimilarity in cultivar mixtures. These findings provide evidence that plasticity in traits, rather than only inherent trait means, contributed to the diversity effects, and the greater functional trait dissimilarity among cultivars in mixtures can increase crop productivity via increasing cryptic diversity in agroecosystems. Our results link changes to plant aboveground traits in cultivar mixtures, which shed light on yield advantages in diverse agroecosystems.
DOI: 10.17632/789594wbsr
title: Posttranslational modification of CTNNBL1 protein 

description: Posttranslational modification of and ubiquitinated peptides in CTNNBL1 during HIV-1 infection. Posttranslational modification analysis of CTNNBL1 protein by phosphorylation, acetylation, ubiquitination, succinylation, crotonylation, and methylation
DOI: 10.17632/nkr54g5kjg
title: Colorado Alliance of Research Libraries Demand Driven Acquisition Program E-Book Pool and Purchases with GOBI Profiling Data

description: This dataset was originally generated for a study of the Colorado Alliance of Research Libraries (CARL) demand driven acquisition (DDA) e-Book program. The study examined the pool of available titles and which of these titles were triggered for purchase based on use. Most of the data was harvested from the acquisitions platform of GOBI Library Solutions from EBSCO (GOBI). It was obtained and is being shared with the permission of GOBI. The list of titles and purchase data was drawn from the integrated library system (ILS) of the Kraemer Family Library (KFL) at the University of Colorado Colorado Springs (UCCS), a member library of CARL and participant in the DDA program. The list of titles and GOBI information were obtained in May 2018.
DOI: 10.17632/83w8k935fd
title: Verifying Fragility in Digital Systems with Uncertainties using DSVerifier v2.0

description: Experimental Setup: The experiments were executed in a computer with the following hardware configurations: Intel Core i7-2600 3.40 GHz processor, 24 GB of RAM, and Ubuntu 64-bits OS. The experiments used the Linux times command to measure CPU time used for each benchmark. The runtime was limited to one hour (i.e., 3600s). Benchmarks Description: IEEE Transaction on Computers Benchmarks: We extracted 4 digital systems (controller and plant) from Keel, L.H. and Bhattacharyya, S.P. 1997. Robust, fragile, or optimal? IEEE Trans. Automat. Control, 42, 1098–1105. All digital systems are designed in transfer-function format, and the discretized plant and controller are published by Bessa, I. V. et al. Formal Non-Fragile Stability Verification of Digital Control Systems with Uncertainty. In IEEE Transactions on Computers, v.66(3), pp. 545-552, 2017. ACM International Conference on Hybrid Systems: Computation and Control (HSCC) Benchmarks: The first set of benchmarks uses the discrete model of a cruise control system for a car, and accounts for rolling friction, aerodynamic drag, and the gravitational disturbance force. The second set of benchmarks considers the discrete model of a simple spring-mass damper plant. A third set of benchmarks uses the discrete model for satellite attitude dynamics, which require attitude control for orientation of antennas and sensors w.r.t. Earth. The fourth and fifth set of benchmarks describe the discrete model of a DC servo motor velocity dynamics. The sixth set of benchmarks contains a well-studied discrete non-minimal phase model. Non-minimal phase models cause additional difficulties for the design of stable controllers. The seventh set of benchmarks describes the discrete model for the Helicopter Longitudinal Motion, which provides the longitudinal motion dynamics of a helicopter. The eighth set of benchmarks contains the discrete model for the known Inverted Pendulum, which describes a pendulum dynamics with its center of mass above its pivot point. The ninth set of benchmarks contains the Magnetic Suspension discrete model, which describes the dynamics of a mass that levitates with support only of a magnetic field. The last set of benchmarks contains the Computer Tape Driver discrete model, which describes a system to read and write data on a storage device. Results: https://docs.google.com/spreadsheets/d/e/2PACX-1vRQDfOY26IHw4gxQFDaRbWVYm-bN4hGOo8d6VZCWiVjSG_nj7qGa6CyDm4phgL97WZNmeXvH-hodhNP/pubhtml#
DOI: 10.17632/jz6fx5x845
title: Dataset of the performance of diagnostic tests for onchocerciasis in DRC, 2015

description: Skin snip biopsies remain the gold standard for the diagnosis of active infection with Onchocerca volvulus. However, in hypoendemic settings, where microfilarial loads are low after several rounds of community directed treatment with ivermectin (CDTI) the sensitivity of skin snip biopsies is low. Detection of Ov16 IgG4 antibodies, although only measuring exposure to the parasite and not active infection, from serological samples via enzyme linked immunosorbent assay (ELISA) or rapid diagnostic test (RDT) may therefore provide a more sensitive tool for the assessment of onchocerciasis burden within hypoendemic settings.

This dataset was compiled from individual-based surveys conducted across 7 villages in The Democratic Republic of the Congo (DRC) in 2015, aiming to compare the performance of skin snipping versus that of Ov16 RDTs. Local healthcare centres conducted the surveys, with skin snips and serological samples being collected from a total of 3126 individuals. 88 individuals (2.82%) tested positive for Ov16 antibodies, with none recording a positive skin snip. The sensitivity of Ov16 RDTs ranges from 60-80%, statistically adequate to detect this level of seroprevalence in the region.

These data lend further support to calls for enhanced usage of RDTs to ensure accurate measurement of hypoendemic burden prior to the cessation of elimination programmes.
DOI: 10.15468/dl.94yj3a
title: Occurrence Download

description: A dataset containing 17027 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hedychium gardnerianum Sheph. ex Ker Gawl.)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation, Literature Occurrence)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17027 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001599-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/ww6vn5v3dy
title: Tools for data collection and scores of pre-service biology teachers

description: The objectives of presenting these files are two-fold. First, the files save to present information related to research tools used to collect the presented data. Second, the files provide useful information on the scores to support the presented data. Specifically, the files indicate pre and post test scores of pre-service biology teachers from which the study was conducted to generate the dataset presented herein. These files also indicate construct validity as well as the reliability of the tools used in the data presented. These files can be used to support the data provided in the article for clarity.
DOI: 10.17632/fw7fmsghwf
title: Raphidocelis subcapitata Imaging Data for Manuscript: Mechanism of Nanomaterial-Induced Lipid Droplet Formation in Raphidocelis subcapitata is Mediated by Charge Properties

description: Raw and normalized data obtained from high-content fluorescence imaging of Raphidocelis subcapitata, cited in our manuscript titled "Mechanism of Nanomaterial-Induced Lipid Droplet Formation in Raphidocelis subcapitata is Mediated by Charge Properties." Data obtained by analysis with Cell Profiler and MetaXpress programs.
DOI: 10.17632/zhk8wwz3f5
title: Operational Aspects of Monetary Policy in Controlling the Demand and Supply of Money 

description: The dataset on Operational Aspects of Monetary Policy in Controlling the Demand and Supply of Money holds significant value for researchers, governments, central banks, and commercial banks alike
DOI: 10.17632/7ht84cbhwg
title: Table VI: GDP per capita growth Income inequality and Energy consumption per capita

description: Table VI further demonstrates the causal relationship among income inequality indicators (Atkinson, Gini, and Palma), economic growth (GDP per capita growth), and energy consumption per capita. It is reported that the income inequality indicators (Atkinson, Gini, and Palma) exhibited negative effects on energy consumption, while economic growth (GDP per capita growth) showed a positive effect on energy consumption. The interaction between income inequality indicators (Atkinson, Gini, and Palma) and economic growth (GDP per capita growth) also negatively affected energy consumption. These findings are summarily consistent with the theory and the expectations of this study, such that a growing and robust economy will stimulate and yield a positive net effect on energy consumption while high poverty levels downplay the positive effect.
DOI: 10.17632/y2s6wsy8n7
title: Role of Biological Soil Crusts on Salt Dynamic in Qara Qir Rangeland, Golestan Province, Iran

description: -
DOI: 10.17632/zh6zxpjn9j
title: The Effects of Countercyclical Interest Rates: Evidence from the Classical Gold Standard

description: This package contains all necessary data and scripts to reproduce the results presented in the paper "The Effects of Countercyclical Interest Rates: Evidence from the Classical Gold Standard" and in the online appendix using Stata.
DOI: 10.17632/mvj9rf6ykj
title: CR Trial

description: These are the extended data for "Physiotherapy versus Pain medication for Managing Chronic Cervical Radiculopathy: Protocol for a Multi-Arm Parallel-Group Randomized Clinical Trial"
DOI: 10.17632/93d27kjskf
title: Vanadium isotope fractionation during mantle melting: Evidence from Cenozoic alkali basalts in eastern China

description: It is well known that vanadium (V) is redox-sensitive during magmatism, but whether V isotopes can be used as an oxygen fugacity (fO2) sensor of the mantle remains controversial. It is crucial to understand the behavior and controlling factors of V isotope fractionation during mantle melting before using V isotopes as a redox proxy. This study presents high-precision V isotopic data for alkali basalts with high fO2 from eastern China, which were generated by low degree partial melting of carbonated mantle. Our results show that their δ51V values (-0.85‰ to -0.61‰) are higher than those of mid-ocean ridge basalts (MORBs) and Bulk Silicate Earth (BSE). Chemical alteration, crustal contamination or fractional crystallization negligibly affect the δ51V values of alkali basalts. Although subducted carbonates are involved in the mantle source region beneath eastern China, mass balance calculations show that the incorporation of carbonates did not significantly increase the V isotopic compositions of alkali basalt. In contrast, the observed high δ51V probably reflects the control of partial melting on the V isotopic compositions of mantle-derived melts. The δ51V values of alkali basalts are positively correlated with indicators of partial melting such as the Nb/Y ratios and δ56Fe values, which indicates that V isotopes could be fractionated during mantle melting. Basaltic melts tend to be enriched in V with high valence as it is overall more incompatible than the V with low valence during partial melting, which contributes to the enrichment of 51V in alkali basalts because of the affinity of high valence V and 51V. Furthermore, the fractionation of V isotopes is more significant at a lower degree of melting and/or a more oxidizing condition. Therefore, this study validates discernable V isotope fractionation during mantle partial melting and examines the potential of using V isotopes to trace the oxidation state of magmatic systems.
DOI: 10.17632/hjnwp64z68
title: Draft Genome Sequence of Cercospora citrullina Cooke, causing Leaf Spot on Cucurbits

description: The fungus Cercospora citrullina is an agriculturally important plant pathogen that causes leaf spot in cucurbits across the world. Lack of genetic information about this fungus prevents a better understanding of its patho-system. Therefore, this study was initiated to study the pathogenic behaviour by detecting genomic features and predicting genomic elements of C. citrullina (isolate Cerl 37-09) from infected leaf samples of Lagenaria siceraria L. In this study, we have constructed a draft genome assembly of C. citrullina using long read native DNA paired-end and mate-pair sequencing on Illumina HiSeq 2500 platform. The draft genome is consisting of 189 contigs with an N50 of 38,592 bp that included 263 single-copy orthologs and 8,856 genes. The C. citrullina genome sequence available at DDBJ/ENA/GenBank under the accession number JAASFF000000000 is a valuable resource to aid for future population genomics studies.
DOI: 10.17632/mjf4cvpks7
title: Availability and Quality of Patient Decision Aids for Dermatologic Conditions - supplemental material

description: Supplemental material for the paper: Availability and Quality of Patient Decision Aids for Dermatologic Conditions (J Am Acad Dermatol. 2020)
DOI: 10.17632/f3fw58yvs4
title: SGS24.xlsx

description: It is a firm level data on knowledge and innovation
DOI: 10.17632/k7zwmz9dtn
title: LINF_070014800

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/kb58mf6vnd
title: Principales causas para la deserción universitaria en el Ecuador

description: Análisis de las causas para determinar deserción universitaria en Ecuador, a través de modelo estadístico.
DOI: 10.17632/sjctrd3r2k
title: Supplementary Materials for v3 of "Autism Risk Genes Are Evolutionarily Ancient and Maintain a Unique Feature Landscape that Echoes Their Function"

description: Supplementary materials for the article "Autism Risk Genes Are Evolutionarily Ancient and Maintain a Unique Feature Landscape that Echoes Their Function," currently under review.
DOI: 10.17632/ctscrwp59j
title: Effects of solar activity

description: Data on solar activity and terrestrial variables
DOI: 10.17632/v49642csf6
title: ABO and LINC00339 as shared causal genes between endometriosis, endometriosis subtypes and epithelial ovarian cancer: a genome-wide association study

description: We analyzed genome-wide association study (GWAS) data to explore the shared genetic structure and causality association of EM and EM subtypes with EOC. Linkage disequilibrium score regression (LDSC) was used to assess genetic correlations, while pleiotropy and enrichment were evaluated through the pleiotropic analysis under composite null hypothesis (PLACO), the multi-marker analysis of genoMic annotation (MAGMA), the Functional Mapping and Annotation of Genetic Associations (FUMA) and colocalization analyses. Mendelian randomization (MR) was applied to assess causal relationships.
The positive genetic associations of EM, adenomyosis (AM), ovarian endometriosis (OE), pelvic peritoneal endometriosis (PPE) and unspecified/other endometriosis (UOE) with EOC were identified, while no correlations of deep endometriosis (DE), fallopian tube endometriosis (FTE), intestinal endometriosis (IE) and endometriosis of the rectovaginal septum and vagina (ERSV) with EOC were found. PLACO and FUMA analysis identified 6 independent genomic risk loci for EM and EOC (EM-EOC), 2 for AM and EOC (AM-EOC), 5 for OE and EOC (OE-EOC), 6 for PPE and EOC (PPE-EOC), and 2 for UOE and EOC (UOE-EOC), 2 of which had strong evidence of colocalization (ABO and LINC00339). Additionally, PLACO and MAGMA analyses revealed that pleiotropic genes associated with EM-EOC, OE-EOC, PPE-EOC, and UOE-EOC were particularly enriched in ovarian tissues. Meanwhile, pleiotropic genes linked to OE-EOC were also specifically enriched in fallopian tubes. Pathway analysis determined the key role of the proteoglycans in cancer and pathways in cancer for EM-EOC, OE-EOC, and PPE-EOC. Finally, the MR analysis demonstrated that EM and EM subtypes causally increase the risk of EOC, while no evidence supported reverse causation.
DOI: 10.17632/9846nvt56s
title: Data on making uniform lignin building blocks via in-situ real-time monitoring hydroxyethyl modification

description: Depending on the detected nuclei (1H, 13C, and 31P), the nuclear magnetic resonance (NMR) spectra reflected lignin's structural features, including but not limited to the chemical linkages, repeating units, and hydroxyl groups. The original softwood kraft lignin (Amallin, WestFraser Corp.) and their hydroxyethyl modified lignin derivatives were analyzed using a 300 MHz NMR (Bruker Corp.). In the repository, the NMR spectrum were attached in a formate.zip file. They can be processed by the Topspin software (Available in the Bruker Website: https://www.bruker.com/service/support-upgrades/software-downloads/nmr/free-topspin-processing/nmr-topspin-license-for-academia.html). The gel permeation chromatography (GPC) traces were also attached in this repository. Three types of detectors, including multi-angle light scattering, intrinsic viscosity, and differential refractive index were adopted to analyze the fractionated lignin resources. The ASTRA software from Wyatt Technology can process the obtained traces to obtain the molecular weight of lignin resources. These data are related to the data in brief manuscript "Data on making uniform lignin building blocks via in-situ real-time monitoring hydroxyethyl modification".
DOI: 10.17632/f49sc2w25c
title: Wind power potential in highlands of the Bolivian Andes: A numerical approach

description: The data is from the research work "Wind power potential in highlands of the Bolivian Andes: A numerical approach" submitted to "Energies". This cointains the namelist and wind-turbine.tbl files for the WRF-ARW simulations, the coordinates of wind farms, and MERRA2 data used in this work.
DOI: 10.17632/4t45fc835x
title: Network Pharmacology-Based Identification of Pharmacological Mechanisms of Inula japonica Thunb. on Non-small Cell Lung Cancer

description: This was the data underlying the study, which included as follows: Table S1 Putative targets in IJT Table S2 Known therapeutic NSCLC-related targets Table S3 Known therapeutic targets of IJT acting on NSCLC Table S4 Topological features of all nodes in the compound-compound target network Table S5 Protein-protein interactions of therapeutic targets of IJT on NSCLC Table S6 Topological features of all nodes in the T-T network of putative IJT targets, known therapeutic target and interactional human proteins Table S7 Topological features of hub nodes in theT-T network for IJT against NSCLC extracted from Fig. 4 Table S8 Significant pathways Table S9 Molecular docking
DOI: 10.17632/3fsd28chjs
title: Supplementary Material for Pharmacodynamic Modeling of Cinacalcet in Secondary Hyperparathyroidism: Efficacy and Influencing Factors Analysis

description: Supplementary Material for manuscript entitled "Pharmacodynamic Modeling of Cinacalcet in Secondary Hyperparathyroidism: Efficacy and Influencing Factors Analysis"
DOI: 10.17632/8km9mzstdx
title: Multi-method Simulation Approach: Multiple Restaurants to Multiple Customers on-demand Food Delivery Case in point: Dubai

description: Appendix: Includes GIS data collected from 172 restaurants and 117 Residential buildings (Customers Population), 
The simulation model along with its source code, and the analysis of the output results.

Link to model: https://cloud.anylogic.com/model/9f90bbe6-81d8-43fb-88bc-24ad65d577d1?mode=SETTINGS
DOI: 10.17632/grwkzbfb9t
title: Accounting Firms Mission, Vision and Core Values Dataset

description: The population of this study includes accounting firms. The sample used in this study comprised 50 international accounting firms and 50 regional accounting firms. Multiple criteria were used to select accounting firms for this study. Firstly, accounting firms must have published their core values publicly.  The core values of the selected 100 accounting firms were extracted from their official websites.