cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.14272/xzjbspoolaxlab-pclikhopsa-n/chmo0000630
title: infrared absorption spectroscopy (IR) ()
title: InChI=1S/C51H38BrNOS4/c1-3-34-26-32-4-5-33-7-9-36(11-10-35(34)8-6-32)39(27-33)16-25-44-28-47-48(55-44)29-45(56-47)37-12-17-40(18-13-37)53(42-21-23-43(54-2)24-22-42)41-19-14-38(15-20-41)46-30-49-50(57-46)31-51(52)58-49/h3,6-9,12-31H,1,4-5,10-11H2,2H3/b25-16+

description: dataset for infrared absorption spectroscopy (IR)
DOI: 10.14272/xzjbspoolaxlab-pclikhopsa-n/chmo0001011
title: gel filtration chromatography (GPC) ()
title: InChI=1S/C51H38BrNOS4/c1-3-34-26-32-4-5-33-7-9-36(11-10-35(34)8-6-32)39(27-33)16-25-44-28-47-48(55-44)29-45(56-47)37-12-17-40(18-13-37)53(42-21-23-43(54-2)24-22-42)41-19-14-38(15-20-41)46-30-49-50(57-46)31-51(52)58-49/h3,6-9,12-31H,1,4-5,10-11H2,2H3/b25-16+

description: dataset for gel filtration chromatography (GPC)
DOI: 10.14272/xzjbspoolaxlab-pclikhopsa-n.1
title: InChI=1S/C51H38BrNOS4/c1-3-34-26-32-4-5-33-7-9-36(11-10-35(34)8-6-32)39(27-33)16-25-44-28-47-48(55-44)29-45(56-47)37-12-17-40(18-13-37)53(42-21-23-43(54-2)24-22-42)41-19-14-38(15-20-41)46-30-49-50(57-46)31-51(52)58-49/h3,6-9,12-31H,1,4-5,10-11H2,2H3/b25-16+

description: This is a physical chemical entity[CHEBI_24431] associated with a molecule[CHEBI_25367], while the molecule[CHEBI_25367] is only part of the composition and does not describe the chemical entity[CHEBI_24431] sufficiently.
 The molecule[CHEBI_25367] can be described by the following structural desciptors[cheminf_000085]:
 InChI descriptor[cheminf_000113]: InChI=1S/C51H38BrNOS4/c1-3-34-26-32-4-5-33-7-9-36(11-10-35(34)8-6-32)39(27-33)16-25-44-28-47-48(55-44)29-45(56-47)37-12-17-40(18-13-37)53(42-21-23-43(54-2)24-22-42)41-19-14-38(15-20-41)46-30-49-50(57-46)31-51(52)58-49/h3,6-9,12-31H,1,4-5,10-11H2,2H3/b25-16+, and canonical SMILES descriptor[cheminf_000007]: COc1ccc(cc1)N(c1ccc(cc1)c1cc2c(s1)cc(s2)Br)c1ccc(cc1)c1cc2c(s1)cc(s2)/C=C/c1cc2CCc3ccc(CCc1cc2)c(c3)C=C, and by the IUPAC name[cheminf_000107]: .
 
 The physical chemical entity[CHEBI_24431] has a component solvent[CHEBI_46787] which is described by the canonical SMILES descriptor[cheminf_000007]:
 
 The physical chemical entity[CHEBI_24431] has the following Sample ID as registered in the research data repository chemotion (www.chemotion-repository.net, https://doi.org/10.25504/FAIRsharing.iagXcR): CRS-47138

 The physical chemical entity[CHEBI_24431] can be described by the physical descriptors [CHEMINF_000025]:
 Melting point descriptor[CHEMINF_000256]: 
 Boiling point descriptor[CHEMINF_000257]: 
 Refractive index descriptor[CHEMINF_000253]:

 The physical chemical entity[CHEBI_24431] can be further described by the following assays[OBI:0000070][CHMO:0001133]:
 
 BFO:0000015 | process
 
 CHMO:0000630 | infrared absorption spectroscopy (IR)
 
 CHMO:0001011 | gel filtration chromatography (GPC)
 
 The physical chemical entity[CHEBI_24431] was deposited to the Molecule Archive of the Karlsruhe Insitute of Technology (KIT) with the following Sample ID: 

 Used ontologies:
 CHEBI - Chemical Entities of Biological Interest
 CHEMINF - chemical information ontology (information entities about chemical entities)
 CHMO - Chemical Methods Ontology
 OBI - Ontology for Biomedical Investigations
DOI: 10.14272/xzjbspoolaxlab-pclikhopsa-n/bfo0000015
title: process ()
title: InChI=1S/C51H38BrNOS4/c1-3-34-26-32-4-5-33-7-9-36(11-10-35(34)8-6-32)39(27-33)16-25-44-28-47-48(55-44)29-45(56-47)37-12-17-40(18-13-37)53(42-21-23-43(54-2)24-22-42)41-19-14-38(15-20-41)46-30-49-50(57-46)31-51(52)58-49/h3,6-9,12-31H,1,4-5,10-11H2,2H3/b25-16+

description: dataset for process
DOI: 10.15468/dl.uum2a9
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oncorhynchus mykiss (Walbaum, 1792)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.0214 -34.0501,25.5395 -34.1098,25.5395 -32.9007,20.509 -32.9007,20.509 -34.5676,20.524 -34.555,20.8859 -34.5419,20.9606 -34.4398,21.2995 -34.5131,21.5296 -34.4338,21.8696 -34.4439,22.0323 -34.2835,22.221 -34.2428,22.2566 -34.1304,22.5993 -34.0741,22.9652 -34.1674,23.4069 -34.1858,23.4955 -34.0792,23.6056 -34.0563,24.8471 -34.2877,24.9447 -34.2397,25.0214 -34.0501))"
 ]
}

 The dataset includes 10 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022579-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/zb4s5-8nn90
title: JV9298

description: DotF-sfGFP DotB E191K
description: <strong>Tilt Series Date:</strong> 2019-10-14</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 3°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -5.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> PNCC Krios 3</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Joe Vogel</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Late exponential/Early stationary</p>
<strong>Sample Preparation:</strong> Quantifoil R2/2 copper. Vitrobot 22 deg C, 100% humidity, 4uL of 2X concentrated culture, blot force 6, blot time 3 sec, drain time 1 sec, wait time 0 sec.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-10-14-186/rawdata/</p>JV9298_28_B3.mrc,  Tilt Series (Pixel Size 0.1323 nm), 15.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-10-14-186/rawdata/JV9298_28_B3.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9298_28_B3_full.rec,  Reconstruction (Pixel Size 1.0584 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-10-14-186/3dimage_109830/JV9298_28_B3_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/pk2b6-b9c85
title: Legionella_JV9246

description: Legionella_JV9246: DotF-sfGFP fusion to the wild-type gene on the chromosome (thyA) and ΔdotO.
description: <strong>Tilt Series Date:</strong> 2019-05-28</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 3.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -4.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Joseph P. Vogel, Washington University School of Medicine. Data collected by Debnath Ghosal and Yuxi Liu.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 3 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-28-93/rawdata/</p>JV9246_area1_tomo0093.mrc,  Tilt Series (Pixel Size 0.26 nm), 1.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-28-93/rawdata/JV9246_area1_tomo0093.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9246_area1_tomo0093_part41_3.rec,  Reconstruction (Pixel Size 1.04 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-28-93/3dimage_103568/JV9246_area1_tomo0093_part41_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/y5af6-tyg66
title: Legionella_delta-lspGHIJK

description: Legionella pneumophila Philadelphia-1_Lp02. Lacks all the T2SS major and minor pseudopilins.
description: <strong>Tilt Series Date:</strong> 2019-05-18</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-45.0°, 45.0°), step: 3.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent by Nicholas Cianciotto, Northwestern University. Data collected and processed by Debnath Ghosal.</p>
<strong>Sample Preparation:</strong> 6 grids were frozen for this strain (2x concentrated culture, OD~4.8); Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 4.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-18-75/rawdata/</p>DG8_201905180093.mrc,  Tilt Series (Pixel Size 0.26 nm), 882.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-18-75/rawdata/DG8_201905180093.mrc"
        > <i class="download icon"></i> Download </a></p>

        DG8_201905180093_full.rec,  Reconstruction (Pixel Size 1.04 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-18-75/3dimage_103073/DG8_201905180093_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/w3ybj-at085
title: JV9082

description: DotF-GFP, defocus range -3 to 6
description: <strong>Tilt Series Date:</strong> 2019-12-05</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 3°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -5.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain from Joe Vogel lab</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Late exponential phase, early stationary phase</p>
<strong>Sample Preparation:</strong> 10nm gold, Quantifoil R2/2 copper mesh 200 Finder grid, Vitrobot 22 deg C, 100% humidity, blot . time 3 sec, blot force 6, drain 1 sec, wait 0 sec.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-12-05-244/rawdata/</p>9082_box2_No3_49.mrc,  Tilt Series (Pixel Size 0.2612 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-12-05-244/rawdata/9082_box2_No3_49.mrc"
        > <i class="download icon"></i> Download </a></p>

        9082_box2_No3_49_full.rec,  Reconstruction (Pixel Size 1.0448 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-12-05-244/3dimage_110560/9082_box2_No3_49_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/n81en-y3h53
title: Legionella_delta-lspHIJK

description: Legionella pneumophila Philadelphia-1_Lp02. Lacks all the T2SS minor pseudopilins.
description: <strong>Tilt Series Date:</strong> 2019-05-16</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-45.0°, 45.0°), step: 3.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent by Nicholas Cianciotto, Northwestern University. Data collected and processed by Debnath Ghosal.</p>
<strong>Sample Preparation:</strong> 6 grids were frozen for this strain (2x concentrated culture); Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 4.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-16-84/rawdata/</p>DG7_20190516_tomo0047.mrc,  Tilt Series (Pixel Size 0.26 nm), 882.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-16-84/rawdata/DG7_20190516_tomo0047.mrc"
        > <i class="download icon"></i> Download </a></p>

        DG7_20190516_tomo0047_full.rec,  Reconstruction (Pixel Size 1.04 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-16-84/3dimage_102801/DG7_20190516_tomo0047_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/04x06-ws151
title: HeLa (Vps4B KD) - PM damaged

description: HeLa (Kyoto line stably expressing CHMP4B-EGFP at low levels; courtesy of MPI) knocked down for Vps4B (double transfection) and laser damaged. Grid - WY42_grid2. Defocus ranges from -4 to -7 for the 23 tilt series in this set.
description: <strong>Tilt Series Date:</strong> 2018-05-21</p>
<strong>Data Taken By:</strong> Shrawan kumar Mageswaran</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -5.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD, tomo3D</p>
<strong>Collaborators and Roles:</strong> HeLa cell line courtesy of Max Planck Institute (MPI). Wei Yang grew cells on grids, transfected with siRNA and caused plasma membrane damage using Laser before freezing. Shrawan performed CLEM and ECT.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown on R2/2 quantifoil gold grids treated with 0.1 mg/mL fibronectin.</p>
<strong>Sample Preparation:</strong> Cells were knocked down for Vps4B with SMART pool siRNA for 48 hr (2 x 24 hr). Laser - 640nm, 100%, 35 cycles, speed 7, Damaged area - 1.5umx1.5um. Cells were treated with 1.3uM AlPcS3a ~10 min before damage.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2018-05-21-13/rawdata/</p>TS18.mrc,  Tilt Series (Pixel Size 0.541 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2018-05-21-13/rawdata/TS18.mrc"
        > <i class="download icon"></i> Download </a></p>

        TS18_4bin_SIRTl20_rotx.rec,  Reconstruction (Pixel Size 0.0 nm), 1.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2018-05-21-13/3dimage_102327/TS18_4bin_SIRTl20_rotx.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/2x5jb-6dr54
title: Yeast 6210 - Nup133delC

description: To study clustering phenotype of nuclear pore complexes. SEY6210 transformed with Nup133dC + Nup49-GFP (Leu)
description: <strong>Tilt Series Date:</strong> 2018-11-27</p>
<strong>Data Taken By:</strong> Shrawan kumar Mageswaran</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -8.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD, tomo3D</p>
<strong>Collaborators and Roles:</strong> Karsten from Hoelz lab made the strain.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> (Hoeltz Lab) Cells were grown overnight in -Leu medium to 0.68 OD (a bit slow growing) @30 C. Cells were diluted to 0.25 OD for freezing in the same medium. Cells were kept on ice (for ~2 hr) until freezing.</p>
<strong>Sample Preparation:</strong> Glow discharged Cu finder grids. Added 3.5 µL of cell suspension and blotted for ~5 sec from behind. temp 6C, RH 100%. FIB-milled.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2018-11-27-21/rawdata/</p>TS13-pt65.mrc,  Tilt Series (Pixel Size 0.432 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2018-11-27-21/rawdata/TS13-pt65.mrc"
        > <i class="download icon"></i> Download </a></p>

        TS13_4bin_SIRTl20_rotx.rec,  Reconstruction (Pixel Size 0.0 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2018-11-27-21/3dimage_102054/TS13_4bin_SIRTl20_rotx.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.ej8ayc
title: Occurrence Download

description: A dataset containing 444 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "GadmGid is USA.37.2_1",
 "TaxonKey is one of (Crocodylia, Testudines, Squamata)"
 ]
}

 The dataset includes 444 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001132-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p1wbpabd
title: Residential Survey to Understand Perceptions of Wildfire Risk and Management in Guam Between 2019 to 2021

description: An online survey of 189 residents in Guam was conducted between 2019 and 2021 to understand perceptions pertaining to wildfire risk, current wildfire management, and physical effects. This data collection aimed to understand what Guam residents think about wildfires, what they know about wildfire management, if there are relationships between demographics and accuracy of perceptions.
DOI: 10.15468/dl.3gpn6m
title: Occurrence Download

description: A dataset containing 417444 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chloris radiata, Chloris virgata, Chondrilla juncea, Chorispora tenella, Christella dentata, Chromolaena corymbosa, Chromolaena odorata, Chrysanthemoides monilifera, Chrysobalanus icaco, Chrysojasminum fruticans, Chrysophyllum cainito, Chrysopogon aciculatus, Chrysopogon zizanioides, Chusquea scandens, Cicerbita macrophylla, Cichorium endivia, Cichorium intybus, Cinchona pubescens, Cinnamomum burmanni, Cinnamomum camphora)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation)",
 "HasCoordinate is true",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 417444 records from 1777 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001094-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/ckte6-he078
title: M. xanthus PilQ delete AA25-300

description: Grid box YWC126SA6808: delta-pilQ_AA25~300
description: <strong>Tilt Series Date:</strong> 2015-04-23</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain form Lotte Sogaard-Andersen</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown 2 days in 220 rpm shaking CTT medium at 30 degrees without antibiotics. OD600=0.8</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 3µl sample, 10 mg/ml BSA treated gold. Blot force 6, blot time 2.5 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2015-04-23-55/rawdata/</p>20150423_YWC126_30009.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
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        20150423_YWC126_30009_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
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