cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/xj8yy2zt4j
title: B151977 Cell Biology Research Project (APPENDIX) Supplementary Datasets

description: This study aimed to ameliorate the limitations posed by the lack of a standardised approach in reporting HES data by providing up-to-date gene annotations for the most recent H. bakeri and H. polygyrus genome assemblies, produced as part of the Darwin Tree of Life Project (The Darwin Tree of Life Project Consortium, 2021; preprint: Stevens et al., 2023). Additionally, this study explored the dynamics underlying the evolution of these complex parasitic genomes. Secreted proteins which have previously been implicated in the immunobiology and infection dynamics of H. bakeri, H. polygyrus and related nematodes were identified in the new H. bakeri and H. polygyrus genome assemblies, highlighting several proteins and domain-types which often differ substantially in copy number between these closely related nematodes. DeepLoc 2.0 was used to predict the subcellular localisation of these proteins, revealing several immunobiologically important proteins which possess signal peptides targeting them for the extracellular space. Orthology inference and phylogenetic analysis of highly represented orthogroups of interest underscored the tumultuous history of gene duplication and loss in the genomes of H. bakeri and H. polygyrus, after millions of years of independent evolution (preprint: Stevens et al., 2023). 

Supplementary Datasets 1 & 2: Tab separated values; BLAST+ aligments against the H. polygyrus and H. bakeri proteomes, respectively.

Supplementary Datasets 3 & 4: Tab separated values; InterPro Scan alignments against the H. polygyrus and H. bakeri proteomes, respectively.

Supplementary Datasets 5 & 6: Tab separated values; DeepLoc 2.0 prediction of extracellular H. bakeri and H. polygyrus proteins, respectively.
DOI: 10.17632/xy67tkv84k
title: LINF_200015200

description: hypothetical protein - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/54nj8895px
title: Identification of respiratory microorganisms by a multiplex PCR system (FilmArray) from patients with presumptive SARS-CoV-2 infection and negative molecular test result

description: This database was obtained by performing a retrospective cohort study employing clinical data and nasopharyngeal swab samples from patients with clinical suspected SARS-CoV-2 infection and a negative PCR result in a private laboratory in Lima, Peru. The samples were analyzed employing the FilmArray™ respiratory panel to identify acute respiratory infection (ARI).
DOI: 10.17632/7zmbzpm6bg
title: Data for: THE PERVERSION OF PUBLIC LAND DISTRIBUTION BY LANDED ELITES: Power, Inequality and Development in Colombia

description: Database and replication files for this paper.
DOI: 10.17632/h49mjgks5y
title: ANÁLISIS DE LOS TITULARES DE LAS NOTICIAS DEL COVID-19 EN LAS PORTADAS DEL PERIÓDICO EL PAÍS EN COLOMBIA DURANTE EL MES DE MARZO Y ABRIL DEL 2020

description: ANÁLISIS DE LOS TITULARES DE LAS NOTICIAS DEL COVID-19 EN LAS PORTADAS DEL PERIÓDICO EL PAÍS EN COLOMBIA DURANTE EL MES DE MARZO Y ABRIL DEL 2020
DOI: 10.17632/kxzz9zcz5r
title: Dataset for instant course attainment indication

description: Hypothesis: The measurement of course attainment is often highly involved, so most of the time the concerned faculty members falter to take corrective action in time. Finding: This dataset provides an easy insight to indicate the course attainment as a various assessment tool is used while delivering the course. It allows the faculty members to quickly adapt to newer teaching and learning strategy meeting the course outcome. In the absence of this, course attainment is seen more as post-processing when one has completed the course. How data was collected: The input required to indicate the course attainment is the target value, university norms for the allocation of grades, list of the assessment tool and count of students. It provides the gross course attainment independent of course outcome level. How to interpret and use it: Higher the count of student for a given performance level, indicate that course attainment value assigned to that level.
DOI: 10.17632/m3rgr436g6
title: LINF_270025000

description: glycosomal phosphoenolpyruvate carboxykinase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/rkn9c66zh5
title: Data for: Fabrication and Photoelectric Properties of a Graphene-Silicon Nanowire Heterojunction on a Flexible PTFE Substrate

description: TEM
DOI: 10.17632/x7tdk9z2dj
title: Supplemental data Estienne

description: Supplemental data for Estienne et al 2022 : Chronic dietary exposure to a glyphosate-based herbicide results in reversible increase early embryo mortality in chicken
DOI: 10.17632/yf86y6by2t
title: Τhe Riemann Hypothesis and distribution of the primes

description: THEME "Τhe Riemann Hypothesis and distribution of the primes" Abstract: The Riemann zeta function is one of the most Euler’s important and fascinating functions in mathematics. By analyzing the material of Riemann’s conjecture, we divide our analysis in the ζ(z) function and in the proof of the conjecture, which has very important consequences on the distribution of prime numbers. The proof of the Hypothesis of Riemann result from the simple logic, that when two properties are associated, (the resulting equations that based in two Functional equations of Riemann ), if zero these equations, ie ζ(z) = ζ (1-z)= 0 and simultaneously they to have the proved property 1-1 of the Riemann function ζ(z).Thus, there is not margin for to non exist the Re (z) = 1/2 {because ζ (z) = ζ (1-z)=0 and also ζ(z) as and ζ(1-z) are 1-1}.This, as it stands, will gives the direction of all the non-trivial roots to be all in on the critical line, with a value in the real axis equal 1/2.
DOI: 10.17632/bdnf2srwcg
title: Modeling Alpha-Synuclein Pathology in a Human Brain-Chip to Assess Blood-Brain Barrier Disruption

description: Experimental Parkinson's disease (PD) models, such as animal models or conventional cell culture systems, have advanced our understanding of the role of αSyn and its aggregated forms in the development of the disease and the induction of neuronal toxicity. However, these models have not been able to uncover the dynamics of the specific interactions between the brain parenchymal cells and the BBB in normal or pathological states. To address this need, we exposed the human Brain-Chip to αSyn fibrils that led to a progressive accumulation of phosphorylated αSyn and the associated induction of specific aspects of αSyn toxicity, such as mitochondrial dysfunction and oxidative stress. We also found that exposure of Brain-Chip to αSyn fibrils results in microglial activation, astrogliosis, and a time-dependent neuronal loss, as described in PD patients. Finally, our results show tight junctions' derangement and progressively compromised BBB permeability in response to αSyn fibrils. This is in line with previous studies showing deregulation of claudin as a key determinant of the BBB integrity and paracellular permeability. Interestingly, control over the amount of αSyn accumulation by treatment with the autophagy inducer trehalose rescued the compromised BBB permeability and the derangement of the tight junctions, suggesting a prospective therapeutic approach for treating compromised BBB implicated in PD. The purpose of this database is to provide the microscope images that have led to the conclusions shown in this report.
DOI: 10.17632/cbj4kb99w2
title: An automated surface determination approach for computed tomography

description: This dataset contains the reconstructed simulation data, MCW surface point clouds, measurement results used for Fig 14 and Fig 16.
DOI: 10.17632/dp75d2776b
title: DataSet_Thesis_KMinPA

description: Doc_DataSet_Busquedas.xlsx - Fichero excel de ecuaciones de búsqueda y recuperación en las fuentes de información utilizadas para el desarrollo de la investigación con los campos necesarios para su recuperación y detalle de cada referencia incluida en la consolidación final sobre los 128 resultados del trabajo

Folder_VOS - Archivo RIS con los 128 registros para la elaboración del análisis temático mediante el software VOSViewer, incluye los parámetros a utilizar para obtener el gráfico del trabajo plasmado en la investigación
DOI: 10.17632/fwvy6x32nz
title: LINF_330007800

description: RGG-containing protein 2 (RGG2) | RESC13
Leishmania infantum (strain JPCM5)
DOI: 10.17632/h9n24zrdvj
title: Manipulating the 3D organization of the largest synthetic yeast chromosome

description: Whether synthetic genomes can power life has attracted broad interest in the synthetic biology field. Here we report de novo synthesis of the largest eukaryotic chromosome thus far, synIV, a 1,454,621-bp yeast chromosome resulting from extensive genome streamlining and modification. We developed megachunk-assembly combined with a hierarchical integration strategy, which significantly increased the accuracy and flexibility of synthetic chromosome construction. Besides the drastic sequence changes, we further manipulated the 3D structure of it to explore spatial gene regulation. Surprisingly, we found few gene expression changes, suggesting that positioning inside the yeast nucleoplasm plays a minor role in gene regulation. Lastly, we tethered synIV to the inner nuclear membrane via its hundreds of loxPsym sites and observed transcriptional repression of the entire chromosome, demonstrating chromosome-wide transcription manipulation without changing the DNA sequences. Our manipulation of the spatial structure of synIV shed light on higher-order architectural design of the synthetic genomes.
DOI: 10.17632/m9fzbpt7g6
title: Dataset for: Portable housing: An alternative housing solution in Kumasi, Ghana

description: This dataset contains CSV files of raw data gathered from two groups of respondents, as well as a MS-Word document showing the frequency distribution, and  descriptive statistics obtained from the IBM SPSS software analysis. Links to the Google forms are also included.
DOI: 10.17632/njfg4sbgv2
title: data for migration premium

description: The literature on martial stability developed by Becker et al. (1977) has become large decades after their seminal work. In Section I of their paper, they propose nine hypotheses and test the nine hypotheses empirically in their Section II. In their conclusion, they admit the importance of a theoretical model in rationalizing and reinvestigating some of their hypotheses. Our study is concerned with the following two hypotheses adduced from their seminal work: 
1.	Are economic conditions crucial for marital stability?
2.	Is marriage more stable when a husband and a wife have more similarities in their cultural/personal traits?
DOI: 10.17632/pr87nccfmg
title: Research data for BRU

description: Research data for BRU
DOI: 10.17632/syn8zmtzfw
title: Ultrasound-controlled Acidogenic Valorization of Wastewater for Biohydrogen and Volatile Fatty Acids Production: Microbial Community Profiling 

description: Authors and Affiliation: 
Omprakash Sarkar*, Leonidas Matsakas, Ulrika Rova, Paul Christakopoulos, 

Biochemical Process Engineering, Division of Chemical Engineering, Department of Civil, Environmental, and Natural Resources Engineering, Luleå University of Technology, 971‑87 Luleå, Sweden, Email: omprakash.sarkar@ltu.se

Abstract
The present study explored the influence of ultrasound on acidogenic fermentation of wastewater for the production of biohydrogen and volatile fatty acids. Eight sono-bioreactors underwent ultrasound (20 kHz: 2 and 4W), with an ultrasound duration ranging from 15 minutes to 30 days, and the formation of acidogenic metabolites. Long-term continuous ultrasonication enhanced biohydrogen and volatile fatty acid production. Specifically, ultrasonication at 4W for 30 days increased biohydrogen production by 3.05-fold compared to the control, corresponding to the hydrogen conversion efficiency of 58.4%; enhanced volatile fatty acid production by 2.49-fold; and increased acidification to 76.43%. The observed effect of ultrasound was linked to enrichment with hydrogen-producing acidogens such as Firmicutes, whose proportion increased from 61.9% (control) to 86.22% (4W, 30 days) and 97.53% (2W, 30 days), as well as inhibition of methanogenic activity. This result demonstrates the positive effect of ultrasound on the acidogenic conversion of wastewater to biohydrogen.
DOI: 10.17632/tpgvnyyfyz
title: Wind analysis for windsport

description: MATLAB files and pdf images containing results of wind conditions and air and water temperature for the manuscript "Opportunities in identifying and marketing windsport tourism destinations: High-resolution wind analysis".
The MATLAB files contain monthly averages. Methods and the averaging time period are described in the body of the paper.
The temperature files include latitudes, longitudes and average values in degrees Celsius. The wind files include the following variables: 
lat - latitude, lon - longitude,  mon - which month was analysed, nDaysYear - number of days above threshold for each year, nDays - multiyear average of nDaysYear,  wlim - wind speed limit used as threshold, T - trend, p - p-value for trend, years - which years were used in the analysis.
DOI: 10.17632/4d27zkrxs4
title: Data for R&D Projects: Primary Data for 1,949 research projects implemented by 3,259 research institutions (Greece)

description: Primary data for the absorption of 1,949 research projects implemented by 3,259 research institutions in the framework of funding actions of the operational programmes of the Partnership Agreement for the Development Framework for the 2007-2013 programming period.
DOI: 10.17632/5wymp6vm56
title: Temperature data pertaining to catalytically supported thermal combustion systems at different flow velocities

description: The temperature is determined at catalyst inlet conditions. The system comprises a concentric annular channel, wherein the concentric annular channel further comprises an inner annular channel and an outer annular channel. A platinum catalyst is deposited only upon the interior surface of the inner channel, and the wall of the outer channel is chemically inert and catalytically inactive. The reactant stream flows through the catalytically-coated inner channel and the product stream flows out of the outer non-catalytic channel. Fuel is present for combustion in both the catalytic and non-catalytic channels. The concentrically arranged annular channel is 5.0 mm in inner channel length, 5.6 mm in outer channel length, 0.8 mm in innermost diameter, 2.6 mm in outermost diameter, 0.1 mm in catalyst layer thickness, and 0.2 mm in wall thickness. The spacing between the inner channel and the outer channel is 0.4 mm and remains constant. The system can have any dimension unless restricted by design requirements. All the walls have the same thickness. One of the potential problems associated with the system, as with all micro-scale combustion systems, continues to be combustion stability.
Contributor: Junjie Chen, E-mail: koncjj@gmail.com, Department of Energy and Power Engineering, School of Mechanical and Power Engineering, Henan Polytechnic University, 2000 Century Avenue, Jiaozuo, Henan, 454000, P.R. China
DOI: 10.17632/7g5nzwcztt
title: Beyond bleaching: thermal stress changes the atomic structure of a shallow-water coral skeleton

description: Supplementary data (Data S1-S8) for manuscript submitted to Science Advances titled "Beyond bleaching: thermal stress changes the atomic structure of a shallow-water coral skeleton".

ABSTRACT: Anthropogenic warming is linked to more frequent coral bleaching events across the globe. Previous work has shown that marine heatwaves cause the expulsion of photosynthetic symbionts from coral tissue (i.e., bleaching) and alter the geochemistry of the coral skeleton, calling into question the reliability of skeletal trace element-based reconstructions of past climate through periods of stress. Here we show– for the first time – that the atomic-scale properties of a Porites sp. coral from Butaritari atoll (3°N, 173°E) reflect the coral's health and are linked to measured trace-element concentrations through time. Furthermore, we find that while trace-element content alone can partially explain the changes in coral aragonite crystal structure, other related factors such as skeletal organic material are also likely contributors. Our findings indicate that marine heatwaves can alter the properties of the fundamental building blocks of the coral's aragonite skeleton, with potential implications for the structural integrity of the reef.
DOI: 10.17632/9dghffm7c3
title: Robinson et al C/T organic geochem data from five sites in the Western Interior Seaway

description: Supplementary data to Robinson et al Redox conditions and ecological resilience during Oceanic Anoxic Event 2 in the Western Interior Seaway.
DOI: 10.17632/m8kmmbdfww
title: Investigating the Effect of Shading on the Capacity Factor of Floating Photovoltaic Systems using GIS and RS Techniques

description: In this study, it was used to determine the 20-year area and shoreline changes of Demirköprü Dam reservoir. Using the GIS solar analysis tool, annual and monthly total global horizontal irradiance (GHI) values were calculated within the area of the reservoir’s shorelines based on 20-year observations. The regional theoretical capacity factor (RTCF) proposed in this study was modelled using total annual GHI values.
DOI: 10.17632/ngzbht7hhh
title: Neural networks 

description: The current scenario demands improvements in environmental management practices by 
firms in order to successfully enter the market. The objective of this paper is to investigate 
waste management in the manufacturing sector based on the emerging industrial paradigms 
by reviewing the literature of such paradigms and incorporating a model of artificial neural 
networks (ANN) to predict the future state of waste management in the Colombian 
manufacturing sector, the data comes from the industrial environmental survey (EAI) of 
DANE. Among the findings is that industrial establishments in Colombia do not have an 
instrument for measuring waste and consequently a high percentage of organic waste is 
generated. For this reason, an ANN model was proposed as a reference framework to support 
decisions on industrial environmental policy in the sector.
specifically, the methodology used
DOI: 10.17632/8bj9wntxgb
title: DEVELOPMENT, VALIDATION AND RELIABILITY TESTING OF STROKE SPECIFIC SHOULDER DISABILITY INDEX

description: Reliability analysis dateset for  SSSDI, A newly develop and validated tool for hemiplegic shoulder
DOI: 10.17632/b7y6h2pcdv
title: Data for: Using CFD and ray tracing to estimate the heat losses of a tubular cavity dish receiver for different inclination angles
DOI: 10.17632/gcw7rbzj5n
title: Data for Fang, et al., MBOC 2023 Ena LOF-B

description: Includes traced images of Drosophila TSM1 axons as they grow. Contains UAS-FP4-mito (enabled gene loss-of-function condition). 
Files are in Imaris format (.ims)
See published paper for complete details of experiment and analysis:
Fang, et al. (2023) “Enabled primarily controls filopodial morphology, not actin organization, in the TSM1 growth cone in Drosophila” 
Mol Biol Cell 2023 May 24;mbcE23010003.  doi: 10.1091/mbc.E23-01-0003
PMID 37223966
DOI: 10.17632/jx8pcx8vvz
title: LINF_140014100

description: protein kinase (CMGC/DYRK family) Leishmania infantum (strain JPCM5)
DOI: 10.17632/m8nr82b9zv
title: Data for: Clinical Value of Increased Peripheral Monocytes at Admission to Predict Cerebral Infarct and Poor Functional Outcomes in Subarachnoid Hemorrhage Patients.

description: 204 patients with SAH diagnosis were included. We collected patient-related factors, comorbidities, Hunt-Hess grade, modified Fisher grade, treatment, DCI, CI, aneurysm characteristics and peripheral monocytes from vein blood at admission.
DOI: 10.17632/n9thzj2f8y
title: Geochemical Data of Major and Trace Elements of the BIF of ZD Fm of the RGB

description: Whole rock geochemical data (wt.%) of the 20 selected samples of Banded Iron Formation (BIF) of the Zandrivierspoort Formation (Fm) of the Rhenosterkoppies Greenstone Belt (RGB) in a descending order are: SiO2 > FeO > MgO > CaO > MnO > Al2O3 > P2O5 > K2O > Na2O > BaO > Cr2O3 > ZrO2 > TiO2 > SrO > V2O5. The trace elements data (ppm) are highest for Ba (476.13), Co (21), and V (129.34), Ni (56,79), and lowest for U (0.20), Sb (0.28), and Cd (0,10). No significant enrichment observed, nonetheless, some transition elements were enriched and their variations are: Ni (1.10 – 56.79), Cu (0.30 – 25.89), Pb (0.10 – 13.00), Ta (0.08 – 11.35), W (1.91 – 17.32). The RGB BIF Fe deposits are depleted in high field strength elements (HFSE) with averages of Ta (1.62), Th (1.34), Sc (4.01), Y (6.00), Zr (9.18). Large ion lithophile elements (LILE) and their average contents are relatively elevated, e.g. Rb (11.11), Sr (6.24), Ba (87.54). 

The average concentrations (ppm) of the rare earth elements (REE) of BIF samples of the RGB in a descending order are: Ce (10.95), La (10.38), Nd (8.81), Y (6.00), Sm (1.94), Yb (0.67), Eu (0.71), Tb (0.29), and Lu (0.10). The enrichment of light rare earth elements (LREE) relative to heavy rare earth elements (HREE) is shown by the ratios of chondrite normalized (La/Sm)n, (La/Yb)n, and (Tb/Yb)n. Chondrite-normalised REE show strong LREE fractionation with (La/Yb)n 18.10 on average. The RGB BIF REE patterns show enrichment in LREE with (La/Sm)n = 3.52 relative to the HREE with (Tb/Yb)n = 2.75. Correspondingly, the RGB BIF samples show a very weak (+) Eu anomaly with Eu/Eu* = Eu(n)/(0.67Sm(n) + 0.33Tb(n)) = 0.09 when normalized against chondrite values by multiplying Anders and Grevesse (1989) values by the factor 1.36, following after (Boynton; 1985; Taylor and McClennan, 1985). In comparison, the REE data show a weak negative (-) Ce anomaly (Ce/Ce* = Ce/Ce* = log[Cen/(La(n) x Nd(n))1/2] = -0.82 (Ndema et al., 2020; Chombong et al., 2017; Akagi and Masuda, 1998).

Pearson’s correlation matrix and binary plots display negative correlations of FeO with La, Ce, Nd, Sm, Eu, Tb, Y, Yb, and Lu. Conversely, unlike FeO, SiO2 shows a positive correlation with La, Ce, Nd, Sm, Eu, Tb, Y, Yb, and Lu.