cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14625663.v1
title: Ready Exerciser One: Effects of Music and Virtual Reality on Cycle Ergometer Exercise

description: <i>Objectives:</i> Physical inactivity remains a major global health concern and researchers have been encouraged to explore the role of technology in the promotion of physical activity. Technologies that deliver audio-visual stimuli are frequently applied in the exercise domain. However, there is a paucity of research that examines the efficacy of modern virtual reality (VR) technology in this context. We investigated the effects of VR and music on affective, perceptual, enjoyment, and cardiac responses to aerobic-type exercise. <i>Design:</i> A fully counterbalanced, within-subjects design was employed. <i>Methods:</i> A convenience sample of recreationally active adult volunteers (<i>N</i> = 24) completed a 12-min protocol during which they exercised under music, VR, VR-with-music, and control conditions. <i>Results:</i> Analyses indicated a Condition × Time interaction for affective valence and perceived activation. Moreover, a main effect of condition emerged for state attention and perceived enjoyment. The VR and VR-with-music conditions elicited the most positive affective valence, highest levels of perceived activation, greatest number of dissociative thoughts, and most exercise enjoyment. Differences between these two conditions were negligible across the breadth of dependent variables. <i>Conclusions:</i> The present findings illustrate the efficacy of modern VR technology in the exercise context, applied both with and without musical accompaniment. Additional research is required to assess the degree to which the findings are replicable among sedentary or ageing segments of the population. Given the emerging support pertaining to a positive relationship between affective responses and exercise adherence, VR technology should be considered as a means by which to promote an enjoyable exercise experience.
DOI: 10.6084/m9.figshare.14625864.v1
title: Inbreeding trends in five Italian beef cattle breeds: a perspective of almost two decades (2002-2020)

description: In the last decades, intensive selection programs have led to sustained increases of inbreeding in dairy cattle, a feature which might have adverse consequences on the viability and phenotypic performance of their offspring. The aim of this study was to determine the evolution of inbreeding of the five Italian beef cattle breeds (Marchigiana, Chianina, Romagnola, Maremmana, and Podolica) during a period of almost 20 years (2002-2019). The estimates of <i>Ho, He, F<sub>hat2</sub>,</i> and <i>F<sub>ped</sub> </i>averaged across years (2002-2019) in the studied breeds fluctuated between 0.340-0.401, 0.348-0.392, –0.121-0.072, and 0.000-0.068, respectively. Moreover, the annual rate of increase of the estimated inbreeding coefficients has been very low (<i>F<sub>hat2</sub></i> = 0.01 - 0.02 %; <i>F<sub>ped</sub></i> = 0.003 - 0.004 %). The use of a high number of bulls combined with strategies implemented by the Association of Italian Beef Cattle Breeders (ANABIC) to minimize inbreeding might explain these results. Despite the fact that diversity and inbreeding have remained quite stable during the last two decades, we have detected a sustained decrease of the population effective size of these five breeds. Such result should be interpreted with caution due to the inherent difficulty of estimating N<sub>e</sub> from SNPs data in a reliable manner.
DOI: 10.5519/qd.myuuwdgc
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (423 records)
DOI: 10.6084/m9.figshare.14035805
title: Scaling lognormal water retention curves for dissimilar soils

description: The main objective of the present research is scaling lognormal water retention curves for dissimilar soils. This method requires a reference curve and the amount of water content in a particular suction. The scaling factor in this method equals the log amount of moisture in a particular suction (e.g. Se5000) in the reference soil to the log amount of water content in the same suction in the soil. The proposed method was evaluated for 14 different soil samples. The scaling factor obtained by this method was evaluated by the scaling factor obtained from the optimization method (αOpt). The results showed that the average scaling factor based on Se5000 is closest to the average αOpt . The water retention curve obtained by the method presented in this research is fitted on the water retention curve obtained from the lognormal model with superior accuracy.
DOI: 10.6084/m9.figshare.13712984
title: Generalized storage-reliability-yield framework for hydroelectric reservoirs

description: Although storage-reliability-yield (SRY) relationships have been widely used in the design and planning of water supply reservoirs, their application in hydroelectricity is practically nil. Here, we revisit the SRY analysis and seek its generic configuration for hydroelectric reservoirs, following a stochastic simulation approach. After defining key concepts and tools of conventional SRY studies, we adapt them for hydropower systems, which are subject to several peculiarities. We illustrate that under some reasonable assumptions, the problem can be substantially simplified. Major innovations are the storage-head-energy conversion via the use of a sole parameter, representing the reservoir geometry, and the development of an empirical statistical metric expressing the reservoir performance on the basis of the simulated energy-probability curve. The proposed framework is applied to numerous hypothetical reservoirs at three river sites in Greece, using monthly synthetic inflow data, to provide empirical expressions of reliable energy as a function of reservoir storage and geometry.
DOI: 10.6084/m9.figshare.14035805.v1
title: Scaling lognormal water retention curves for dissimilar soils

description: The main objective of the present research is scaling lognormal water retention curves for dissimilar soils. This method requires a reference curve and the amount of water content in a particular suction. The scaling factor in this method equals the log amount of moisture in a particular suction (e.g. Se5000) in the reference soil to the log amount of water content in the same suction in the soil. The proposed method was evaluated for 14 different soil samples. The scaling factor obtained by this method was evaluated by the scaling factor obtained from the optimization method (αOpt). The results showed that the average scaling factor based on Se5000 is closest to the average αOpt . The water retention curve obtained by the method presented in this research is fitted on the water retention curve obtained from the lognormal model with superior accuracy.
DOI: 10.6084/m9.figshare.13712984.v1
title: Generalized storage-reliability-yield framework for hydroelectric reservoirs

description: Although storage-reliability-yield (SRY) relationships have been widely used in the design and planning of water supply reservoirs, their application in hydroelectricity is practically nil. Here, we revisit the SRY analysis and seek its generic configuration for hydroelectric reservoirs, following a stochastic simulation approach. After defining key concepts and tools of conventional SRY studies, we adapt them for hydropower systems, which are subject to several peculiarities. We illustrate that under some reasonable assumptions, the problem can be substantially simplified. Major innovations are the storage-head-energy conversion via the use of a sole parameter, representing the reservoir geometry, and the development of an empirical statistical metric expressing the reservoir performance on the basis of the simulated energy-probability curve. The proposed framework is applied to numerous hypothetical reservoirs at three river sites in Greece, using monthly synthetic inflow data, to provide empirical expressions of reliable energy as a function of reservoir storage and geometry.
DOI: 10.21227/ec5p-p865
title: Supplementary Data for "Beam and Bandwidth Design of Conformal Dielectric Resonator Antenna Employing SIE-Based Substructure Characteristic Mode Analysis"

description: Supplementary Data for "Beam and Bandwidth Design of Conformal Dielectric Resonator Antenna Employing SIE-Based Substructure Characteristic Mode Analysis"
DOI: 10.5281/zenodo.4603685
title: Spatial repository of Woodlands-for-Water PES cases

description: This repository includes selected case studies on Payments for Ecosystem Services that facilitate tree- and forest-based interventions for improved water quality and quantity. The repository is published at https://public.tableau.com/views/SpatialRepository-PaymentsforEcosystemServicesForestsforWaterCOSTactionCA15206PESFOR-W/Spatialrepository. The information in the repository has been collected within the framework of the COST action PESFOR-W (CA15206).
DOI: 10.5281/zenodo.4603684
title: Spatial repository of Woodlands-for-Water PES cases

description: This repository includes selected case studies on Payments for Ecosystem Services that facilitate tree- and forest-based interventions for improved water quality and quantity. The repository is published at https://public.tableau.com/views/SpatialRepository-PaymentsforEcosystemServicesForestsforWaterCOSTactionCA15206PESFOR-W/Spatialrepository. The information in the repository has been collected within the framework of the COST action PESFOR-W (CA15206).
DOI: 10.17632/4386ygc6r4.1
title: AA Tofacitinib Supplementary Table Final

description: Alopecia areata recurrence patterns in children and young adults while on systemic tofacitinib therapy
DOI: 10.5281/zenodo.4769335
title: Transcription-coupled structural dynamics of topologically associating domains regulate replication origin efficiency

description: Background Metazoan cells only utilize a small subset of the potential DNA replication origins to duplicate the whole genome in each cell cycle. Origin choice is linked to cell growth, differentiation, and replication stress. Despite various genetic and epigenetic signatures are found to be related with the replication efficiency of origins, a consensus in that how the selection of origins is determined has been lacking. Results Here, we applied dual-color stochastic optical reconstruction microscopy (STORM) super-resolution imaging to map the spatial distribution of origins within individual topologically associating domains (TADs). We found that multiple replication origins initiate separately at the spatial boundary of a TAD at the beginning of the S phase. Intriguingly, while both highly-efficient and lowly-efficient origins are distributed homogeneously in the TAD during the G1 phase, highly-efficient origins relocate to the TAD periphery before entering the S phase. We proved that such origin relocalization is dependent on both transcription and CTCF-mediated chromatin structure. Further, we observed that the replication machinery protein PCNA forms immobile clusters around the TADs at the G1/S transition, which explains why origins at the TAD periphery are preferentially fired.
DOI: 10.5281/zenodo.4769334
title: Transcription-coupled structural dynamics of topologically associating domains regulate replication origin efficiency

description: Background Metazoan cells only utilize a small subset of the potential DNA replication origins to duplicate the whole genome in each cell cycle. Origin choice is linked to cell growth, differentiation, and replication stress. Despite various genetic and epigenetic signatures are found to be related with the replication efficiency of origins, a consensus in that how the selection of origins is determined has been lacking. Results Here, we applied dual-color stochastic optical reconstruction microscopy (STORM) super-resolution imaging to map the spatial distribution of origins within individual topologically associating domains (TADs). We found that multiple replication origins initiate separately at the spatial boundary of a TAD at the beginning of the S phase. Intriguingly, while both highly-efficient and lowly-efficient origins are distributed homogeneously in the TAD during the G1 phase, highly-efficient origins relocate to the TAD periphery before entering the S phase. We proved that such origin relocalization is dependent on both transcription and CTCF-mediated chromatin structure. Further, we observed that the replication machinery protein PCNA forms immobile clusters around the TADs at the G1/S transition, which explains why origins at the TAD periphery are preferentially fired.
DOI: 10.5255/ukda-sn-854828
title: Water Sanitation and Hygiene, and Antibiotics Stewardship in Kenyan Hospitals, 2017-2019

description: This work was carried in Kenyan public hospital the main aim was to assess hospitals Infection Prevention and Control (IPC) and Antibiotic Stewardship(ABS) capacity as part of tracking and tackling efforts to limit antimicrobial resistance in Kenya. We redesigned an existing WASH facility improvement tool to collect data across 16 county hospitals with a total of 116 wards. There were 65 indicators in 4 domains used for this assessment that is 14 indicators for water, Sanitation 22 indicators, hygiene 18 indicators and 11 for organisational management domain. 32 of these indicators were also assessed at ward level. Addition modifications on the tool allowed us to contrast performance by assessing infrastructural, material and human resources to support WASH services, We the WASH facility tool to to allocate responsibilities at a more health systems level allowing for different levels of hospital leadership to be accountable for the implementation and subsequent improvement of WASH in hospitals. Antibiotic Stewardship - We examined prescription patterns and explored to what extent guidelines are available and how they might influence treatment appropriateness in Kenya. Data on antimicrobial usage were collected from hospitalised patients using a point prevalence survey across 14 Kenyan public hospitals spanning antimicrobials prescribed, laboratory investigations, clinical diagnoses and physical availability of treatment guidelines.
DOI: 10.15161/oar.it/73799
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.
DOI: 10.25402/fsg.14625750
title: Supplementary Table 2. Extracellular metabolites of endophytic fungi from Azadirachta indica inhibit MDR bacteria and phytopathogens.

description: Article abstract: Aims: To evaluate antimicrobial activity of extracellular metabolites (EM) of endophytic fungal isolates (EFI) from Azadirachta indica.Methods: EFI were identified by ITS sequencing. Antimicrobial activity, and MIC and MBC were determined using agar diffusion and microdilution method, respectively.Results: Seventeen EFI were isolated from different organs of Azadirachta indica. Eight of them were identified based on ITS sequencing. The EM of EFI inhibited the growth of six MDR bacterial superbugs and three phytopathogenic fungi. The MDR bacterial superbugs are resistant to six commercial antibiotics of different generations but susceptible to EM of EFI. The MIC (0.125 to 1.0 µg/µL), MBC (0.5 to 4.0 µg/µL) and MFC (1.0 to 4.0 µg/µL) of the EM from EFI are lower enough. Conclusions: The EM of the EFI has promising antimicrobial activity against MDR bacteria and phytopathogenic fungi.
DOI: 10.6084/m9.figshare.14462073
title: Data sets - Honeybee drone tracking

description: Data supporting the publication "Harmonic radar tracking reveals that honeybee drones navigate between multiple aerial leks" (2021) iScience. Joseph Woodgate, James Makinson, Natacha Rossi, Ka Lim, Andrew Reynolds, Christopher Rawlings & Lars Chittka. https:doi.org/10.1016/j.sci.2021.102499
DOI: 10.6084/m9.figshare.14626277
title: Data for paper analysis and plotting. from Where is my hand in space? The internal model of gravity influences proprioception

description: Data used for main analyses in manuscript, including Constant and Variable errors With and Against Gravity in Upright and Tilted body postures. Constant errors at each hand angle for each participant for creating raincloud plots.
DOI: 10.5517/ccdc.csd.cc25n7z2
title: CCDC 2015464: Experimental Crystal Structure Determination

description: Related Article: Guan-Lei Gao, Yan-Rong Jia, Hao Jiang, Min Xia|2021|Dyes Pigm.|186|109030|doi:10.1016/j.dyepig.2020.109030
DOI: 10.5517/ccdc.csd.cc25n804
title: CCDC 2015465: Experimental Crystal Structure Determination

description: Related Article: Guan-Lei Gao, Yan-Rong Jia, Hao Jiang, Min Xia|2021|Dyes Pigm.|186|109030|doi:10.1016/j.dyepig.2020.109030
DOI: 10.48370/ofd/6nkaup
title: Kalmusia clivensis (Berk. Broome) M.E. Barr, 3449

description: Fungarium Mikromycetes
DOI: 10.5281/zenodo.4775329
title: Audio dataset for perceptive studies in DYNAMAP project

description: Audio dataset used in perceptive studies of the LIFE DYNAMAP project. It includes the data used in three studies conducted to measure the perceived annoyance of several urban sounds. The audios are classified firstly in the three directories belonging to the three tests conducted and after that the audios are classified in directories belonging to the sensor name. The details of the calibration for each sensor are given in the README_calibration.txt file and the correction levels for each sensor are given in calibrationFactors.csv.
DOI: 10.5281/zenodo.4775293
title: Temporal Seismic Velocity Changes During the 2020 Rapid Inflation at Mt. Þorbjörn-Svartsengi, Iceland, Using Seismic Ambient Noise

description: This document includes the seismological data associated with the following paper: “Temporal Seismic Velocity Changes During the 2020 Rapid Inflation at Mt. Þorbjörn-Svartsengi, Iceland, Using Seismic Ambient Noise” by Cubuk-Sabuncu, Y., Jónsdóttir, K., Caudron, C., Lecocq, T., Parks, M.M., Geirsson, H., Mordret, A. (2021). Geophysical Research Letters. Correspondence: (yesim@vedur.is)
DOI: 10.5281/zenodo.4775292
title: Temporal Seismic Velocity Changes During the 2020 Rapid Inflation at Mt. Þorbjörn-Svartsengi, Iceland, Using Seismic Ambient Noise

description: This document includes the seismological data associated with the following paper: “Temporal Seismic Velocity Changes During the 2020 Rapid Inflation at Mt. Þorbjörn-Svartsengi, Iceland, Using Seismic Ambient Noise” by Cubuk-Sabuncu, Y., Jónsdóttir, K., Caudron, C., Lecocq, T., Parks, M.M., Geirsson, H., Mordret, A. (2021). Geophysical Research Letters. Correspondence: (yesim@vedur.is)
DOI: 10.25919/j8ky-dr49
title: Parkes observations for project P1005 semester 2021APRS_02

description: We propose to conduct observations of PSR J1812-15, a 1-s pulsar in a 20.3-hr circular orbit around a light companion which also exhibits variable emission (turning `on’ and `off’). Binary pulsars are valuable objects of scientific study, allowing for a wide range of applications, including tests of gravity, probes of the neutron star equation of state and fossil records of stellar evolution. Long spin-period pulsars in binary systems are generally much rarer than faster-spinning recycled pulsars, and represent an under-explored region of pulsar binary evolution. We propose a two-pronged campaign designed to address individual aspects of PSR J1812-15’s behaviour. Firstly, although we have developed a binary solution as a consequence of previous P1005 observations, we are still unable to develop a phase-connected timing solution, a key step in understanding this pulsar and its binary formation process. We therefore propose a 6-month monitoring campaign intended to provide the additional constraint required to determine a unique solution. Secondly, we have identified a correlation between the pulsar’s detectability and its orbital phase, suggesting that an eclipse or other complex interaction between the pulsar and its binary companion is at least partially responsible for its variable emission. We propose to monitor a series of consecutive orbits so as to fully cover the pulsar’s orbital phase, exploiting the wide bandwidth of the UWL receiver to distinguish between variability due to the binary companion or other sources (e.g. intrinsic pulse nulling).
DOI: 10.25934/00005708.0
title: Available IPD datapackage for study 'A Randomized, Double-blind Study to Evaluate the Effect of Various Re-treatment Regimens of MabThera in Combination With Methotrexate on Treatment Response in Rheumatoid Arthritis Patients With an Inadequate Response to Methotrexate.'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00005708.1
title: IPD datapackage for study 'A Randomized, Double-blind Study to Evaluate the Effect of Various Re-treatment Regimens of MabThera in Combination With Methotrexate on Treatment Response in Rheumatoid Arthritis Patients With an Inadequate Response to Methotrexate.' and research request: 'Predicting the Treatment Response of Biologics for Individual Patients with Rheumatoid Arthritis: An Individual Participant Data Meta-Analysis '

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.5281/zenodo.4707457
title: Zooarchaeological database of early medieval Heumarkt (Cologne, Germany)

description: The site of Heumarkt (FB96.13) is located in the city center of Cologne, in North Rhine-Westphalia, western Germany. This database contains the zooarchaeological information of the inventory of the faunal materials recovered at the site (mainly from fills of sunken featured structures and dark-coloured layers), all hand-collected. The remains were recorded using Ossobook. There were almost 8000 fragments, of which we calculated approximately 3200 MNE (Minimum Number of Elements). The recorded data are: taxon, skeletal element, taphonomy (butchery marks, overal preservation, colour, etc.), and biometrical data. The majority of the remains are dated to the Merovingian (5th-7th c.), Carolingian (8th-9th c.), and Ottonian (end 9th-10th c.) periods. The assemblage is predominated by pig, followed by cattle, and with an increasing presence of sheep/goat over time. Other identified species are: equids, cat, dog, aurochs, red deer, roe deer, wolf?, fox, beaver, Anser sp., chicken, eel, common barbel, Percidae, Salmo sp., Cyprinidae and Bivalvia. We would like to thank Thomas Höltken, from the Römisch-Germanisches Museum Köln, and Eckhard Deschler-Erb, from the University of Cologne, for their collaboration. The faunal remains from Heumarkt were subject to previous analyses by H. Berke and J. Kokabi. These are the references for these works: Berke, H. 1997. Haustiere, Handwerker und Händler, vorläufige archäozoologische Ergebnisse der Ausgrabungen am Heumarkt in Köln. Kölner Jarhbuch 30: 405-413. Kokabi, J. 2001. Archäozoologische Untersuchung zu den Ausgrabungen Köln-Heumarkt. Kölner Jarhbuch 34: 841-873.