cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/w57h389k49.2
title: Data for: Composition and lability of riverine dissolved organic matter: Insights from thermal slicing ramped pyrolysis GC-MS analysis

description: The data include chemical analysis of high molecular weight dissolved organic matter (HMW-DOM) collected from nine North American rivers, including stable carbon and nitrogen isotopes, total hydrolyzable amino acids, and pyrolysates through thermal slicing ramped pyrolysis GC-MS.
DOI: 10.17632/s3zb4zwrc7.1
title: Data for: Tracking the magmatic response following subduction initiation in fossilized forearc mantle wedge: Insights from the geochemistry of ophiolitic peridotites in Southeastern Turkey

description: Trace element geochemistry data of ophiolitic peridotites from SE Turkey
DOI: 10.6084/m9.figshare.12455732
title: Raptor population genetics database

description: Database including 83 publications on population genetic structure of birds of prey and life history traits of 50 species (migration, body mass, philopatry, site fidelity).
DOI: 10.17632/69dpxs8whc.1
title: Data for: An effective and scalable overlapping community detection approach: Integrating social identity model and game theory

description: There are 7 networks, include 3 networks of google+, 2 networks of twitter, derived from Stanford Network Analysis Platform (SNAP). It also includes two synthetic networks.
DOI: 10.17632/ps6hfypmn4.1
title: Data for: Effects of Structural System and Site Classification on Water Footprint of Residential Buildings

description: This gives water footprint data required to assess the water footprint of building structures.
DOI: 10.17632/67dbfyg739.2
title: Data for: Genetic methods reveal lack of stock structure and a historical population decline of cuckoo rays (Leucoraja naevus) in the northern part of Northeast Atlantic

description: Microsatellite genotypes of cuckoo rays in structure format
DOI: 10.17632/db9cxmxwpt.1
title: Data for: Prevalence of Mitochondrial Mutations in UAE Patients with Hearing Loss

description: Raw data for Whole-exome sequencing and Sanger sequencing.
DOI: 10.17632/rmykhy2b3y.1
title: Data for: Combined radiotherapy and new systemic therapies - have we moved beyond palliation?

description: Clinical Oncology Review Article
DOI: 10.17632/dw4749kk7w.2
title: Data for: Complex variable solutions on twin tunnelling at great depth in viscoelastic geomaterial considering the three-dimensional effects of tunnel faces

description: The .zip file contains both Mathematical codes (Ver 11.0) and the ABAQUS model (Ver 6.16) for verification of the analytical algorithm, as well as for the parametric investigation.
DOI: 10.17632/s97kpycx63.1
title: Data for: Tracking the birth and growth of Cimmeria: Geochronology and origins of intrusive rocks from NW Iran

description: New geochronological and geochemical data for Late Neoproterozoic to Mesozoic igneous rocks from NW Iran define major regional magmatic episodes and track the birth and growth of one of the Cimmerian microcontinents: the Persian block. After the final accretion of the Gondwanan terranes, the subduction of the Prototethyan Ocean beneath NW Gondwana during the Late Neoproterozoic was the trigger for high magmatic fluxes and the emplacement of isotopically diverse arc-related intrusions in NW Gondwana. The Late Neoproterozoic rocks of NW Iran belong to this magmatic event which includes intrusions with highly variable εHf(t) values. This magmatism continued until a magmatic lull during the Ordovician, which led to the erosion of the Neoproterozoic arc, and then was followed by a rifting event which controlled the opening of Paleotethys. An additional, prolonged pulse of rift magmatism in Persia lasted from Devonian-Carboniferous to Early Permian time. These magmatic events are geographically restricted and are mostly recorded from NW Iran, although there is some evidence for these magmatic events in other segments of Iran. The Jurassic rocks of NW Iran are interpreted to be the along-strike equivalents of a Mesozoic magmatic belt (the Sanandaj-Sirjan Zone; SaSZ) toward the NW. Magmatic rocks from the SaSZ show pulsed magmatism, with high-flux events at both ∼176-160 Ma and ~130 Ma. The SaSZ magmatic rocks show both arc- and plume-related geochemical signatures. The plume-related signature of less-contaminated melts is manifested by high εHf(t) values, with peaks at +0.6 and +11.2. All these magmatic pulses led to pre-Cimmerian continental growth and reworking during the Late Neoproterozoic, rifting and detachment of the Cimmerian blocks from Gondwana in Mid-Late Paleozoic time and further crustal growth and reworking of Cimmeria during the Mesozoic.
DOI: 10.25345/c5bn52
title: MassIVE MSV000087316 - Proteomics Characterization of Neutrophil Extracellular Traps
title: Neutrophils are necessary in mamalian life and are the most abundant type of white blood cells in humans with biological roles relevant to inflammation and the entire host response. The release of neutrophil extracellular DNA in innate immune cells provides specific response to bacteria and fungi. Neutrophil Extracellular Traps (NETs) act as antimicrobial agents and activators of immune response through release of the nuclear content into the extracellular space. Although great strides have been made in dissecting cellular and molecular pathways that control NET formation, the exact molecular composition of released NETs has not been elucidated. Here, we open the field of NETOMIC studies through isolation of NETs in combination with shotgun genomics and proteomics. This study reveals the molecular composition of NETs and specific expression regions of NETs induced in a sterile inflammation system. The existence of an in vitro NET isolation model allowed for an unprecedented amount of replicability. Additional studies are needed to verify the specificity of these sequences in the context of human health and disease upon diverse neutrophil microbial challenges. For proteomics experiment, after thawed from -80C, NET solutions were added with a protease inhibitor and 1% Benzonase Nuclease (Sigma) and incubated at 37C for 20 min to remove nucleic acids; proteins were digested using Suspension Trapping (STrap) method. LC-MS/MS analysis was performed using Ultimate 3000 nanoLC and Q Exactive mass spec (Thermo Scientific). Label-free quantitation by MaxQuant (v1.6.3.4); downstream bioinformatics analyses were performed on Perseus software (v1.6.7.0).
DOI: 10.17632/gftrp9ym5z.1
title: Data for: Detrital zircon age constraints on depositional history and provenance of the Murihiku Supergroup, Murihiku Terrane, North Island, New Zealand

description: U-Pb data for all zircons analysed in all sandstone samples described within this study. All analyses were carried out by Dr Chris Adams, senior author of this paper.
DOI: 10.17632/jcpj3xdhtt.1
title: Data for: Dataset on technological alliances by using joint patents in the biotechnology industry

description: The data in this article includes biotechnological joint patents as a proxy of technological alliances. Each joint patent has their corresponding International Patent Classification codes, their forward citation measure as an indicator of innovation value, and the firms involved in the process. The data was collected during a time frame that ranges from 2006 to 2010.
DOI: 10.17632/chh5w7njwm.1
title: Data for: Towards a computerized estimation of visual complexity in images: Data to assess the association of computed visual complexity features to human responses in visual tasks.

description: The data contains computerized visual Tasks and subject's performance
DOI: 10.17632/r3zhfg9gwv.1
title: Data on the survival times of breast cancer patients in a Teaching Hospital, Osogbo

description: The data has 8 variables 1 Time: This measures the survival times of the patients.The survival time is the difference between the date of report for treatment at the hospital for treatment andd the date of last contact. The time is measured in Days 2: Age of Patients: This gives the age of the patients in years 3: Censor: This is the censor values. It is 1 when uncensored and 0 when censored 4: Age at Menarche: This measures the age at which the patients forst had A menstrual flow.Measured in years 5:Breastfeeding: This measures the average years that the patient used to breastfeed 6: Contraceptive: Has the patient used contraceptive before? 1-Yes, 2-No 7: Detection: We categorized this into two; Stage I/ Stage II (Early Detection) , Stage III/Stage IV(Late Detection) 8: Neoadjuvant: Was Neoadjuvant administered? 1-Yes, 2-No
DOI: 10.18739/a2v97zs6g
title: Surface meltwater production timeseries for Sermeq Avannarleq, western Greenland Ice Sheet from 2017-2018.

description: We calculate surface meltwater production (hourly melt rates) for three on-ice weather stations located in the ablation area of Sermeq Avannarleq, an outlet glacier of the western Greenland Ice Sheet. We use data from two automatic weather stations (AWS) installed during the MoVE project (Moulin and Velocity Experiment), as well as data from the Greenland Climate Network (GC-NET) weather station JAR1, to calculate melt rates at each location. Our lowest elevation weather station named LOWC was installed at "Low Camp", a field site (69.4726 N, 49.8267 W) at an elevation of ~770 meters above sea level (m.a.s.l.), The GC-NET weather station JAR1 was located approximately five kilometers upglacier at an elevation of ~930 m.a.s.l.. Our highest elevation weather station named HIGH was installed at "High Camp", a field site (69.5419N, 49.7088W) at an elevation of ~960 m.a.s.l. We calculate melt rate using the enhanced temperature index model (Pellicciotti et al., 2015) which requires hourly measurements of air temperature, incoming solar radiation, and daily ice-surface albedo values. We fill data gaps in each timeseries using measurements from active weather stations to produce timeseries spanning the 2017 and 2018 melt seasons. The only data gap during the 2017 or 2018 melt seasons spans 24 June 2018 when station JAR1 went offline, and ends 8 July 2018 when the LOWC weather station was fixed upon arrival in the field.
DOI: 10.17632/ffxcr5nvfm.2
title: Data for: Heterogeneous rock modelling method and characteristics of multistage hydraulic fracturing based on the PHF-LSM method

description: The production of oil and gas can be enhanced by the multistage hydraulic fracturing. The PHF-LSM method, which is combined by the level set method (LSM) and a permeability-based hydraulic fracture (PHF) model, is introduced in this paper. The LSM is used for implicitly modeling the heterogeneity of the different scaled rock matrix, and the PHF model, which was previously used for a single point hydraulic fracture simulation, is extended for simulating multi-fracture development. The heterogeneities of the three interested rock types consist of randomly layered features in both horizontal and vertical directions, the rock matrix with irregular inclusions randomly distributed, and the property distribution of rock determined by the spatial coordinates. The level set functions are given for implicitly describing the rock matrix by introducing continuous random variables. The PHF model is used for simulating the fracture development in the proposed rock types under single point fracturing, multipoint simultaneous fracturing and multistage fracturing. Numerical simulations are performed to study the behavior of fracture propagation. The results address the characteristics of breakdown pressure, stress path, time history of pore pressure and the development of hydraulic fractures when the spacing of injection points varies from small to large. The results indicate that the proposed implicit modeling method works well with the PHF model for simulating the procedures of multipoint and multistage fracturing.
DOI: 10.17632/xjj9ynjndt.1
title: Data for: Effects of lutein on brain damage and vasospasm in the experimental subarachnoid hemorrhage model
DOI: 10.17632/rsm85skd4y.1
title: Data for: Optimization of Dispersed Alkaline Substrate (DAS) technology to remove sulfate and metals from Andean Acid Mine Drainages (AMD) using CaCO3-rich residues from agri-food industries and witherite (BaCO3)

description: Compilation of acid mine drainage data from rivers in Chile and Argentina
DOI: 10.6084/m9.figshare.13757593
title: Modeling Multiple Time-Varying Related Groups: A Dynamic Hierarchical Bayesian Approach With an Application to the Health and Retirement Study

description: As the population of the older individuals continues to grow, it is important to study the relationship among the variables measuring financial health and physical health of the older individuals to better understand the demand for healthcare, and health insurance. We propose a semiparametric approach to jointly model these variables. We use data from the Health and Retirement Study which includes a set of correlated longitudinal variables measuring financial and physical health. In particular, we propose a dynamic hierarchical matrix stick-breaking process prior for some of the model parameters to account for the time dependent aspects of our data. This prior introduces dependence among the parameters across different groups which varies over time. A Lasso type shrinkage prior is specified for the covariates with time-invariant effects for selecting the set of covariates with significant effects on the outcomes. Through joint modeling, we are able to study the physical health of the older individuals conditional on their financial health, and vice-versa. Based on our analysis, we find that the health insurance (medicare) provided by the government (of the United States) to the older individuals is very effective, and it covers most of the medical expenditures. However, none of the health insurances conveniently cover the additional medical expenses due to chronic diseases like cancer and heart problem. Simulation studies are performed to assess the operating characteristics of our proposed modeling approach. Supplementary materials for this article, including a standardized description of the materials available for reproducing the work, are available as an online supplement.
DOI: 10.17632/d4gxdjgxgt.1
title: Data for: Mechanisms and pathways of ethidium bromide Fenton-like degradation by reusable magnetic nanocatalysts

description: Data of Mechanisms and pathways of ethidium bromide Fenton-like degradation by reusable magnetic nanocatalysts
DOI: 10.6084/m9.figshare.13757610
title: Adaptive Inference for Change Points in High-Dimensional Data

description: In this article, we propose a class of test statistics for a change point in the mean of high-dimensional independent data. Our test integrates the U-statistic based approach in a recent work by Wang et al. and the <i>L<sub>q</sub></i>-norm based high-dimensional test in a recent work by He et al., and inherits several appealing features such as being tuning parameter free and asymptotic independence for test statistics corresponding to even <i>q</i>’s. A simple combination of test statistics corresponding to several different <i>q</i>’s leads to a test with adaptive power property, that is, it can be powerful against both sparse and dense alternatives. On the estimation front, we obtain the convergence rate of the maximizer of our test statistic standardized by sample size when there is one change-point in mean and <i>q</i> = 2, and propose to combine our tests with a wild binary segmentation algorithm to estimate the change-point number and locations when there are multiple change-points. Numerical comparisons using both simulated and real data demonstrate the advantage of our adaptive test and its corresponding estimation method.
DOI: 10.6084/m9.figshare.13757593.v1
title: Modeling Multiple Time-Varying Related Groups: A Dynamic Hierarchical Bayesian Approach with an Application to the Health and Retirement Study

description: As the population of the older individuals continues to grow, it is important to study the relationship among the variables measuring financial health and physical health of the older individuals to better understand the demand for healthcare, and health insurance. We propose a semiparametric approach to jointly model these variables. We use data from the Health and Retirement Study (HRS) which includes a set of correlated longitudinal variables measuring financial and physical health. In particular, we propose a Dynamic Hierarchical Matrix Stick-Breaking Process (DH-MSBP) prior for some of the model parameters to account for the time dependent aspects of our data. This prior introduces dependence among the parameters across different groups which varies over time. A Lasso type shrinkage prior is specified for the covariates with time-invariant effects for selecting the set of covariates with significant effects on the outcomes. Through joint modeling, we are able to study the physical health of the older individuals conditional on their financial health, and vice-versa. Based on our analysis, we find that the health insurance (medicare) provided by the government (of the United States) to the older individuals is very effective, and it covers most of the medical expenditures. However, none of the health insurances conveniently cover the additional medical expenses due to chronic diseases like cancer and heart problem. Simulation studies are performed to assess the operating characteristics of our proposed modeling approach.
DOI: 10.6084/m9.figshare.13756617
title: Linear Hypothesis Testing in Linear Models With High-Dimensional Responses

description: In this article, we propose a new projection test for linear hypotheses on regression coefficient matrices in linear models with high-dimensional responses. We systematically study the theoretical properties of the proposed test. We first derive the optimal projection matrix for any given projection dimension to achieve the best power and provide an upper bound for the optimal dimension of projection matrix. We further provide insights into how to construct the optimal projection matrix. One- and two-sample mean problems can be formulated as special cases of linear hypotheses studied in this article. We both theoretically and empirically demonstrate that the proposed test can outperform the existing ones for one- and two-sample mean problems. We conduct Monte Carlo simulation to examine the finite sample performance and illustrate the proposed test by a real data example.
DOI: 10.17632/j9r6ds45zb.2
title: Data for: Comparison of floc properties of coagulation systems: effect of particle concentration, scale and mode of flocculation

description: The image used for calculating the floc sizes is included in this data set. The caption of the images include the system and the concentration of the input TOC and turbidity. RM refers to rapid mixing in jar test, SM refers to slow mixing in jar test and CC refers to conventional clariflocculator. After this initial, the TOC is indicated in mg/L and then turbidity is indicated in NTU.
DOI: 10.6084/m9.figshare.11882523
title: Using digital field notebooks in geoscientific learning in polar environments

description: The emergence of digital tools, including tablets with a multitude of built-in sensors, allows gathering many geological observations digitally and in a geo-referenced context. This is particularly important in the polar environments where (1) limited time is available at each outcrop due to harsh weather conditions, and (2) outcrops are rarely re-visited due to the high economic and environmental cost of accessing the localities and the short field season. In an educational development project, we explored the use of digital field notebooks in student groups of 3–4 persons during five geological field campaigns in the Arctic archipelago of Svalbard. The field campaigns formed part of the Bachelor and Master/PhD courses at the University Centre in Svalbard in Longyearbyen at 78°N. The digital field notebooks comprise field-proofed tablets with relevant applications, notably FieldMove. Questionnaires and analyses of students’ FieldMove projects provided data on student experience of using digital field notebooks, and insight into what students used the digital notebooks for, the notebooks’ functionality and best practices. We found that electronic and geo-referenced note- and photo-taking was by far the dominant function of the digital field notebooks. In addition, some student groups collected significant amounts of structural data using the built-in sensors. Graduate students found the ability to conduct large-scale field mapping and directly display it within the digital field notebook particularly useful. Our study suggests that the digital field notebooks add value to field-based education in polar environments.
DOI: 10.6084/m9.figshare.11882523.v1
title: Using digital field notebooks in geoscientific learning in polar environments

description: The emergence of digital tools, including tablets with a multitude of built-in sensors, allows gathering many geological observations digitally and in a geo-referenced context. This is particularly important in the polar environments where (1) limited time is available at each outcrop due to harsh weather conditions, and (2) outcrops are rarely re-visited due to the high economic and environmental cost of accessing the localities and the short field season. In an educational development project, we explored the use of digital field notebooks in student groups of 3–4 persons during five geological field campaigns in the Arctic archipelago of Svalbard. The field campaigns formed part of the Bachelor and Master/PhD courses at the University Centre in Svalbard in Longyearbyen at 78°N. The digital field notebooks comprise field-proofed tablets with relevant applications, notably FieldMove. Questionnaires and analyses of students’ FieldMove projects provided data on student experience of using digital field notebooks, and insight into what students used the digital notebooks for, the notebooks’ functionality and best practices. We found that electronic and geo-referenced note- and photo-taking was by far the dominant function of the digital field notebooks. In addition, some student groups collected significant amounts of structural data using the built-in sensors. Graduate students found the ability to conduct large-scale field mapping and directly display it within the digital field notebook particularly useful. Our study suggests that the digital field notebooks add value to field-based education in polar environments.
DOI: 10.6084/m9.figshare.13530553.v1
title: “Stickier” learning through gameplay: An effective approach to climate change education

description: As the impacts of climate change grow, we need better ways to raise awareness and motivate action. Here we assess the effectiveness of an Arctic climate change card game in comparison with the more conventional approach of reading an illustrated article. In-person assessments with control/reading and treatment/game groups (N = 41), were followed four weeks later with a survey. The game was found to be as effective as the article in teaching content of the impacts of climate change over the short term, and was more effective than the article in long-term retention of new information. Game players also had higher levels of engagement and perceptions that they knew ways to help protect Arctic ecosystems. They were also more likely to recommend the game to friends or family than those in the control group were likely to recommend the article to friends or family. As we consider ways to broaden engagement with climate change, we should include games in our portfolio of approaches.