cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/d5abe9009d7f6aa87d1fcf49c8c7f8c8
title: North Temperate Lakes LTER: Zooplankton - Madison Lakes Area 1997 - current

description: Zooplankton samples for the 4 southern Wisconsin LTER lakes (Mendota, Monona, Wingra, Fish) have been collected for analysis by LTER since 1995 (1996 Wingra, Fish) when the southern Wisconsin lakes were added to the North Temperate Lakes LTER project. Samples are collected as a vertical tow using an 80-micron mesh conical net with a 30-cm diameter opening (net mouth: net length ratio = 1:3) consistent with sampling conducted by the Wisconsin Dept. Natural Resources in prior years. Zooplankton tows are taken in the deep hole region of each lake at the same time and location as other limnological sampling; zooplankton samples are preserved in 70% ethanol for later processing. Samples are usually collected with standard tow depths on most dates (e.g., 20 meters for Lake Mendota) but not always, so tow depth is recorded as a variate in the database. Crustacean species are identified and counted for Mendota and Monona and body lengths are recorded for a portion of each species identified (see data protocol for counting procedure); samples for Wingra and Fish lakes are archived but not routinely counted. Numerical densities for Mendota and Monona zooplankton samples are reported in the database as number or organisms per square meter without correcting for net efficiency. [Net efficiency varies from a maximum of about 70% under clear water conditions; net efficiency declines when algal blooms are dense (Lathrop, R.C. 1998. Water clarity responses to phosphorus and Daphnia in Lake Mendota. Ph.D. Thesis, University of Wisconsin-Madison.)] Organism densities in number per cubic meter can be obtained by dividing the reported square-meter density by the tow depth, although adjustments for the oxygenated depth zone during the summer and early fall stratified season is required to obtain realistic zooplankton volumetric densities in the lake's surface waters. Biomass densities can be calculated using literature formulas for converting organism body lengths reported in the database to body masses. Sampling Frequency: bi-weekly during ice-free season from late March or early April through early September, then every 4 weeks through late November; sampling is conducted usually once during the winter (depending on ice conditions). Number of sites: 4 Note: for a period between approximately 2011 and 2015, a calculation error caused density values to be significantly greater than they should have been for the entire dataset. That issue has been corrected.
DOI: 10.6073/pasta/f20f9a644bd12e4b80cb288f1812c935
title: Lake Mendota water temperature secchi depth snow depth ice thickness and meterological conditions 1894 - 2007

description: Data for water temperature at different depth and different frequencies assembled from various sources by Dale Roberson. A table with additional parameters collected at the same time is also provided for dates when available. These parameters are weather observations, secchi depth, snow and ice depths.
DOI: 10.15156/bio/2959342
title: UNITE mothur release for Fungi

description: Three sets of mothur files are released, corresponding to the SHs resulting from clustering at the 3% distance (97% similarity) and 1% distance (99%) threshold levels. The third set of files is the result of a dynamic use of clustering thresholds, such that some SHs are delimited at the 3% distance level, some at the 2.5% distance level, some at the 2% distance level, and so on; these choices were made manually by experts of those particular lineages of fungi. The syntax is the same throughout the three sets of files. Includes singletons set as RefS (in dynamic files).
DOI: 10.15468/dl.k6d6hn
title: Occurrence Download

description: A dataset containing 295382 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Castanea sativa Mill."
 ]
}

 The dataset includes 295382 records from 1247 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002270-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/5p7fxjt7vs.1
title: Data for: Deep Learning Approach to Skin Layers Segmentation in Inflammatory Dermatoses

description: The dataset consists of 380 High Frequency Ultrasound (HFUS) images of 380 different patients with AD (303) and psoriasis (77). The data were acquired using DUB SkinScanner75 with a 75 MHz transducer yielding images of size 2067x1555 pix and of four different resolutions (lateral x axial): {0.0019x0.085, 0.0024x0.085, 0.0031x0.085, 0.0019x0.085} mm/pix. For each image, the entry echo - epidermis and SLEB layer delineated by an expert are provided. The data set includes the neural network models trained to segment the layers. The details concerning the models are given in reference paper: https://doi.org/10.1016/j.ultras.2021.106412
DOI: 10.17632/td8r3ty79b.1
title: High-Frequency Dataset of Facial Skin

description: The Dataset includes High-Frequency Images (image sequences) of Facial Skin. The data were acquired using DUB SkinScanner75 with a 24MHz transducer. The original size of images was 3466x1386x3.
The image sequences were collected during 4 sesions, with 44 patients. The data were acquired from 3 different locations on patient face.
The folder names refer to the acquisition date. The file names are defined as: px_y_z, where x denotes patient ID, y refers to the facial location, and z is the image index in the acquired series.
During the acquisition process, the HFUS series were registered. Each of them includes the image data suitable for further diagnosis (techncal - using CAD software, or medical) and noninformative images.
The image usfulness was described by 3 experts, and the labels are included in data_desc.xls. 

The repository includes CNN models (VGG16, pretrained on ImageNet), which were trained to divide the dataset into this 2 groups (informative and noninformative). Four different models were considered:
1 - vgg16_net_tl_64_1_w25_ALL_exp_aug0.mat
2 - vgg16_net_tl_64_1_w25_ALL_normal_aug0.mat
3 - vgg16_net_tl_64_1_w25_ALL_strict_aug0.mat
4 - vgg16_net_tl_64_1_w25_ALL_strict_aug0_v1.mat 

1 - first model, from 5-fold, trained using labels provided by Expert 1, 2 - first model, from 5-fold, trained using labels provided by Expert 2, 3 - third model, from 5-fold, trained using labels provided by Expert 3.
 4 -  first model, from 5-fold, trained using labels, which were the same for all the experts (the expert agree).

Due to the limited space, the image data are provided in the size of 224x224x3. This dataset was used  to train all the CNN models.
If you are interested in the image data in original size, please contect the corresopnding author.
DOI: 10.34970/2020-ds01
title: SIIM-ISIC 2020 Challenge Dataset
DOI: 10.4121/bb43fe1d-f503-49e8-9f17-ce7d734f015d
title: Raw data, analysis and modelling scripts for the article "Bichromatic Rabi control of semiconductor qubits"

description: The research primarily investigates the challenges associated with electrically-driven spin resonance in controlling semiconductor spin qubits, particularly when scaling up to larger systems. The study introduces and evaluates a coherent bichromatic Rabi control method for quantum dot hole spin qubits, aiming to provide a spatially-selective approach for extensive qubit arrays. The findings are supported through a theoretical framework, emphasizing the significance of interdot motion in bichromatic driving. This research is experimental and theoretical in nature. The data was collected with a digitiser through RF-reflectometry by measuring the charge response of a single-hole transistor.
DOI: 10.5281/zenodo.10564835
title: Data for Electron-induced non-monotonic pressure dependence of the lattice thermal conductivity of θ-TaN.

description: Data for Electron-induced non-monotonic pressure dependence of the lattice thermal conductivity of θ-TaN

Contents:

Structure file, harmonic (second-order) and anharmonic (third- and fourth-order) interatomic force constants (IFCs) and phonon-electron scattering rates, and the input files for the FourPhonon package for each pressure considered in the paper.
DOI: 10.5281/zenodo.11205708
title: US reservoir surface and littoral area

description: These datasets include estimates for littoral area and surface areas (based on water occurrence and recurrence) for reservoirs in the US that are documented in HydroLakes.
DOI: 10.5281/zenodo.13919220
title: Data and plotting scripts for "Influence of ocean model horizontal resolution on the representation of global annual-to-multidecadal coastal sea level variability"

description: This repository includes a jupyter notebook "FOSI-HR-LR-TG-analysis.ipynb" that creates the figures for the referenced paper, using the included derived observational and model datasets.
DOI: 10.6069/1w19-vx76
title: Global Burden of Disease Study 2019 (GBD 2019) Disability Weights

description: "The Global Burden of Disease Study 2019 (GBD 2019), coordinated by the Institute for Health Metrics and Evaluation (IHME), estimated the burden of diseases, injuries, and risk factors for 204 countries and territories and selected subnational locations.

Disability weights, which represent the magnitude of health loss associated with specific health outcomes, are used to calculate years lived with disability (YLD) for these outcomes in a given population. The weights are measured on a scale from 0 to 1, where 0 equals a state of full health and 1 equals death. This table provides disability weights for the 440 health states (including combined health states) used to estimate nonfatal health outcomes for the GBD 2019 study.

For additional GBD results and resources, visit the GBD 2019 Data Resources page."
DOI: 10.6073/pasta/0cdf7e5e954be1798ab9bf4f23816e83
title: Fish abundance in the San Francisco Estuary (1959-2021), an integration of 9 monitoring surveys.

description: The San Francisco Estuary (SFE) is simultaneously a central hub of
 water delivery in California and home to commercially important and
 endangered fishes, such as Chinook Salmon, Green Sturgeon, and Delta
 and Longfin Smelt. Extensive ecological monitoring has been
 conducted for over 50 years, mainly under the auspices of the
 Interagency Ecological Program for the San Francisco Estuary
 (https://iep.ca.gov/). We integrated fish catch and length data from
 9 long-term monitoring surveys in the SFE. The integrated database
 contains survey-level data such as environmental variables and
 sampling effort in addition to the fish-level species, lengths, and
 counts. Zero catches have been filled in for any species not caught
 in a sample. The geographic scope includes San Francisco Bay through
 the upper estuary, and the timeseries spans 1959 to 2021. Sampling
 methods, gear, fish length metric, and other factors differ among
 the component surveys. Sampling designs (locations and temporal
 frequency) have also changed over time. Thus, it is highly
 recommended to inspect the documentation of the component surveys
 for more information on their methods.
DOI: 10.6073/pasta/4886dbb80cf709a4c6e5906ff94eacdc
title: Interagency Ecological Program: USFWS Delta Boat Electrofishing Survey, 2018-2022

description: The United States Fish and Wildlife Service's (USFWS) Delta Boat Electrofishing Survey was designed to estimate spatial and temporal trends in abundance, occupancy, capture probabilities, and related environmental drivers of fish assemblages across nearshore littoral habitats within the Sacramento-San Joaquin River Delta. The USFWS Lodi Field Office in collaboration with the United States Geological Survey developed the survey in 2018 to expand fish monitoring and inferences in nearshore habitats not monitored by long-term USFWS beach seine surveys within the San Francisco Estuary. The survey uses a robust statistical framework, including a stratified random sampling design and segmented transects that act as spatial replicates for occupancy modeling. 
 For more information on the Lodi U.S. Fish and Wildlife Office: https://www.fws.gov/lodi/
DOI: 10.6084/m9.figshare.17032712
title: Data for "Fano Combs in the Directional Mie Scattering of a Water Droplet"

description: Data regarding the Mie Fano Comb scattering of an evaporating, optically levitated droplet.<br><br>Two .cvs data files and one video are included. <br><br>The <b>video </b>shows the far field interference pattern of the levitated droplet collected by the lens. Together with Eq.(4) this can be used to calculate the radius of the droplet. The distance between the stripes, S, is calculated from the video using that the diameter of the circle of stripes in the video is 25 mm, the distance, d, is 52 mm, and the wavelength is 532 nm.<br>"<b>DropletRadius-30sps.cvs</b>" contains the calculated radius for each frame (30 frames per second). The data stops when the lines cannot be used to calculate the size anymore.<br>"<b>DirectionalMieSpectrumTimeSeriesAndRadiusFit-10000sps.cvs</b>" contains the scattering intensity and the radius of the droplet at 10 000 samples per second. The size is calculated using a fit of the data above. Plotting Intensity and radius results in Fig. 2a. <br><br><br>
DOI: 10.6084/m9.figshare.26964259
title: A Membrane Permeability Database for Nonpeptidic Macrocycles

description: we present a comprehensive online database (https://swemacrocycledb.com/), housing 5638 membrane permeability datapoints for 4216 nonpeptidic macrocycles, curated from the literature, patents, and bioactivity repositories. Provided code and raw files
DOI: 10.6084/m9.figshare.27118044
title: Norwegian Parliamentary Debates Dataset

description: Norwegian Parliamentary debates 1945-2024 with speaker and speech metadata
DOI: 10.6084/m9.figshare.27640317
title: Singer et al. Pluto Crater Data for JGR-Planets Publication Titled "Pluto Geologic Map: Use of Crater Data to Understand Age Relationships"

description: Table S1 is a comma-delimited text file (.csv) that contains a list of all craters between 7-to-25 km, their feature identification number (FID), their longitude and latitude in decimal degrees, and the unit abbreviation for the geologic unit they were assigned to.These data are associated with a Singer et al. manuscript submitted to the Journal of Geophysical Research - Planets. The title is "Pluto Geologic Map: Use of Crater Data to Understand Age Relationships". Publication information, including a DOI, will be updated upon completion of the peer review process.<b>Abstract: </b>Pluto’s surface displays a wide variety of geologic units from smooth plains to extremely rugged mountainous expanses. These terrains range in age from young, actively resurfaced regions (no observable craters even in the highest-resolution New Horizons images) to old, heavily cratered, eroded regions. Here we expand upon the crater data analysis and the independent crater data set used in the production of a 1:7M scale geologic map of Pluto that is to be published by the United States Geologic Survey (USGS). We present both relative ages based on crater spatial density (number of craters in a given size bin per km<sup>2</sup>) and also quantitative ages (e.g., 2 Ga) using the estimated impactor flux onto Pluto. The techniques presented here were developed specifically for the information available from a USGS geologic map, where smaller craters are mapped as points only (no specific diameter information per crater). We developed a new type of visualization, called a distributed R-plot, to understand the relative ages of the geologic units. The uncertainties in the current knowledge of the Kuiper belt populations and impactor flux at Pluto propagate to large uncertainties in the estimated quantitative ages (~a factor of two). However, both relative and quantitative ages from crater analysis were still valuable tools in developing the sequence of geologic events. Pluto has large areas of crater-free young terrains (13 units making up ~27% of mapped higher-resolution surface area), with widely varying morphologies, indicating a variety of resurfacing mechanisms, both exogenic and endogenic, likely active into Pluto’s recent past or present.
DOI: 10.6084/m9.figshare.27791184
title: Dataset for figures of Photoinduced hidden monoclinic metallic phase of VO<sub>2</sub>.

description: This is a dataset for publications of "Photoinduced Hidden Monoclinic Metallic Phase of VO₂" at Nature Communications.
DOI: 10.6084/m9.figshare.28093184
title: Supplementary Material for: Comparison of colon adenoma detection rate using transparent cap-assisted and conventional colonoscopy: result from an international trial in Asia

description: Introduction: Controversy remains regarding transparent cap-assisted technique improves adenoma detection rate (ADR) in colonoscopy. We aimed to investigate the effect of transparent cap-assisted colonoscopy on ADR and other colonoscopy performance.
Methods: We performed sub-analysis of an international, multicenter, open-label database containing colonoscopy data from 11 centers in 4 Asian countries/regions on patients who underwent colonoscopy. The patient characteristics, procedure related characteristics, and pathological findings of all detected lesions were prospectively recorded. The patients were divided into 2 groups as receiving colonoscopy with or without transparent cap attachment. The ADR and procedure time were compared between the 2 groups. Other procedural factors related to ADR were also investigated. 
Results: Between November 2020 and January 2022, 3,029 who underwent colonoscopy (transparent cap-assisted colonoscopy, n=1,796; standard colonoscopy, n=1,233) were enrolled in this study. The transparent cap-assisted colonoscopy group ADR was significantly higher than the conventional colonoscopy (55.1% vs 50.0%, p&lt;0.01). Transparent cap-assisted colonoscopy detected a higher proportion of patients with adenoma (odd ratio (OR): 1.59, 95%CI: 1.13-2.24, p&lt;0.01) and any polypoid lesion (OR: 1.49, 95%CI: 1.04-2.16, p=0.03). Transparent cap-assisted colonoscopy also reduced cecal intubation time (mean difference: -0.35 min) and total colonoscopy time (mean difference -3.4 min). In the other procedural factors, using linked color imaging (OR: 1.75, 95%CI: 1.49-2.06, p&lt;0.01), patient body rotation (OR: 1.54, 95%CI, 1.12-2.13, p&lt;0.01), longer withdrawal time (OR:1.12, 95%CI: 1.09-1.15, p&lt;0.01) were also significantly associated to adenoma detection. 
Conclusion: In real-world practice, transparent cap-assisted colonoscopy is a safe and inexpensive technology that could improve adenoma and polyp detection.
DOI: 10.17632/37pm7jk7jn.3
title: The dataset of photoplethysmography signals collected from a pulse sensor to measure blood glucose level

description: Non-invasive monitoring and surveillance methods of blood glucose measurement can provide ease of use and simplicity for different individuals while reducing the risks and damages of invasive methods. The non-invasive method based on photoplethysmography (PPG) signal is one of the innovative methods on this topic which numerous studies have been conducted by research centers and various companies. However, due to various reasons, the reviewed dataset was not available and no standard dataset has been published on this topic. The presented dataset, which was sampled by the research team of the digital systems of the University of Science and Technology in Mazandaran, Behshahr, Iran, includes 67 raw PPG signals with 2175 Hz sampling frequency along with labeled data: age, gender, and the invasive blood glucose level which can be used in other studies and learning algorithms.
DOI: 10.18112/openneuro.ds001747.v1.1.0
title: Exploring the Resting State Neural Activity of Monolinguals and Late and Early Bilinguals
DOI: 10.18112/openneuro.ds001796.v1.7.0
title: Bilingualism and the brain
DOI: 10.18112/openneuro.ds002345.v1.1.4
title: Narratives
DOI: 10.18112/openneuro.ds002382.v1.0.1
title: Age-related differences in auditory cortex activity during spoken word recognition
DOI: 10.18112/openneuro.ds003481.v1.0.3
title: Pragmatic Language
DOI: 10.18112/openneuro.ds003643.v2.0.5
title: Le Petit Prince: A multilingual fMRI corpus using ecological stimuli
DOI: 10.18112/openneuro.ds004073.v1.0.1
title: Comparing language lateralisation using fMRI and fTCD
DOI: 10.18112/openneuro.ds004285.v1.0.0
title: Listening task
DOI: 10.18112/openneuro.ds004765.v1.0.0
title: language fMRI
DOI: 10.25421/yorksj.24449983.v1
title: R Code for calculating predicted values and effect sizes in the 2x2 Model of Perfectionism (main effects model).

description: R code to calculate predicted values for subtypes of perfectionism in the 2x2 Model of Perfectionism (Gaudreau & Thompson, 2010) based on a main effects model (no interaction term). Effect sizes (Cohen's <i>d</i>) are also calculated to test the hypotheses of the model based on equations in Gaudreau (2012).Gaudreau, P. (2012). A methodological note on the interactive and main effects of dualistic personality dimensions: An example using the 2× 2 model of perfectionism. <i>Personality and Individual Differences,</i><i> </i><i>52 </i>(1), 26-31. https://doi.org/10.1016/j.paid.2011.08.022Gaudreau, P., & Thompson, A. (2010). Testing a 2×2 model of dispositional perfectionism. <i>Personality and Individual Differences, 48</i>(5), 532–537. https://doi.org/10.1016/j.paid.2009.11.031<br><br><br>