cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.8qke3f
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Saussurea rhytidocarpa Hand.-Mazz."
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0277389-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.33cytp
title: Occurrence Download

description: A dataset containing 660570 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((1.8796086666666671 48.58410666666667, 35.924964333333335 48.58410666666667, 35.924964333333335 65.67073733333334, 1.8796086666666671 65.67073733333334, 1.8796086666666671 48.58410666666667))",
 "EventDate is 2013-11-01,2013-11-30"
 ]
}

 The dataset includes 660570 records from 345 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017726-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fgrqmv
title: Occurrence Download

description: A dataset containing 4115 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Country is Mexico",
 "TaxonKey is Byrsonima crassifolia (L.) Kunth"
 ]
}

 The dataset includes 4115 records from 130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150612-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.13uogc
title: Occurrence Download

description: A dataset containing 339685 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is VerteCAT: Banco de datos de vertebrados de Cataluña"
 ]
}

 The dataset includes 339685 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049419-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.54c4qu
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centropogon cazaletii Jeppesen"
 ]
}

 The dataset includes 11 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150614-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jwhmhp
title: Occurrence Download

description: A dataset containing 100 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coccyzus americanus (Linnaeus, 1758)",
 "HasCoordinate is False",
 "Country is United States of America",
 "Year is greater than or equal to 2014",
 "Year is less than or equal to 2018",
 "Month is greater than or equal to January",
 "Month is less than or equal to December",
 "HasGeospatialIssue is False"
 ]
}

 The dataset includes 100 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0257303-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nurhdf
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyathea decorata (Maxon) R.M.Tryon"
 ]
}

 The dataset includes 63 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150613-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5u39z4
title: Occurrence Download

description: A dataset containing 705 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Nyctibius leucopterus (zu Wied-Neuwied, 1821)"
 ]
}

 The dataset includes 705 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003702-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t6cbdd
title: Occurrence Download

description: A dataset containing 198000 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is DEU",
 "OccurrenceStatus is Present",
 "TaxonKey is Odonata"
 ]
}

 The dataset includes 198000 records from 460 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0274842-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m4r4lv
title: Occurrence Download

description: A dataset containing 626 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asterogyne martiana (H.Wendl.) H.Wendl. ex Drude",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 626 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049420-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5jnx7
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Clusia kanukuana Maguire"
 ]
}

 The dataset includes 16 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150615-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.utvekx
title: Occurrence Download

description: A dataset containing 868 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Festuca psammophila (Hack. ex Čelak.) Fritsch"
 ]
}

 The dataset includes 868 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003741-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gp8psw
title: Occurrence Download

description: A dataset containing 75 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Pseudostellaria heterophylla (Miq.) Pax"
 ]
}

 The dataset includes 75 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0274844-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.0f2zrv
title: Occurrence Download

description: A dataset containing 2467 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asystasia gangetica (L.) T.Anderson",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 2467 records from 117 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049421-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mex7yt
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boesenbergia cordata R.M.Sm."
 ]
}

 The dataset includes 14 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061405-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7ea6xa
title: Occurrence Download

description: A dataset containing 453 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-126.73595 12.10051,-77.26405 12.10051,-77.26405 31.89949,-126.73595 31.89949,-126.73595 12.10051))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cambarellus montezumae (de Saussure, 1857)"
 ]
}

 The dataset includes 453 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032891-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.48f8u9
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Polyipnus asper Harold, 1994"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061025-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ghwkm
title: Occurrence Download

description: A dataset containing 97 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Festuca pseudotrichophylla Patzke"
 ]
}

 The dataset includes 97 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003803-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a89qf8
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Neacomys pictus Goldman, 1912"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0216303-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zkcwi5
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((96.34 46.87,96.27 46.89,96.12 46.87,95.98 46.88,95.88 47.04,95.78 47.16,95.58 47.22,95.46 47.29,95.35 47.33,95.29 47.32,95.12 47.32,95 47.3,94.83 47.31,94.71 47.25,94.73 47.09,94.81 46.93,94.85 46.82,95 46.69,95.17 46.68,95.29 46.64,95.4 46.53,95.53 46.37,95.62 46.29,95.87 46.21,96.05 46.1,96.25 45.93,96.05 45.92,95.72 45.97,95.42 46,95.15 45.94,94.88 45.91,94.79 45.85,94.76 45.74,94.66 45.66,94.35 45.59,94.24 45.46,94.42 45.26,94.5 45.02,94.47 44.92,94.44 44.83,94.56 44.75,94.81 44.63,94.97 44.56,95.17 44.5,95.35 44.46,95.55 44.45,95.73 44.49,95.87 44.6,95.94 44.71,95.89 44.84,95.75 44.94,95.8 44.97,95.9 44.93,95.98 44.85,96.08 44.79,96.16 44.84,96.06 44.97,95.94 45.07,95.82 45.13,95.86 45.16,96.02 45.13,96.13 45.14,96.23 45.2,96.42 45.22,96.79 45.1,97.15 44.99,97.41 44.89,97.9 44.73,98.41 44.64,98.85 44.53,99.07 44.4,99.35 44.34,99.6 44.28,99.86 44.19,100.1 44.12,100.4 44.08,100.7 44.07,101 44.07,101.1 44.16,101.1 44.35,101.1 44.56,101.1 44.74,101.1 44.91,100.9 44.99,100.7 44.99,100.5 45.02,100.2 45.1,99.98 45.21,100.1 45.27,100.2 45.38,99.87 45.49,99.36 45.67,98.91 45.8,98.5 45.98,98.14 46.23,97.87 46.29,97.34 46.49,96.81 46.46,96.44 46.5,96.48 46.71,96.34 46.87))",
 "HasCoordinate is true",
 "TaxonKey is Trisetum flavescens (L.) P.Beauv.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 59 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049421-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7mvsh7
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Garcinia sumbawensis Lauterb."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003818-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.np25bm
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Brazil",
 "Country is Colombia"
 ]
 },
 "TaxonKey is Saguinus inustus (Schwarz, 1951)",
 "Year 2000-2019"
 ]
}

 The dataset includes 12 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0235351-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ztsxgg
title: Occurrence Download

description: A dataset containing 613 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Atractocarpus fitzalanii (F.Muell.) Puttock",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 613 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049422-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3kqcdc
title: Occurrence Download

description: A dataset containing 229139 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Abelmoschus moschatus (L.) Medik., Abies alba Mill., Abrus precatorius L.)"
 ]
}

 The dataset includes 229139 records from 1391 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003807-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.czyhb9
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dennisiella babingtonii (Berk.) Bat. & Cif.)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 52 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0239010-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r34sx7
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Taraxacum neoaellenii Soest"
 ]
}

 The dataset includes 36 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007543-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qpj3ja
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendrobium flexicaule Z.H.Tsi, S.C.Sun & L.G.Xu"
 ]
}

 The dataset includes 13 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017004-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25443744.v1
title: An efficient coalescent model for heterochronously sampled molecular data

description: Molecular sequence variation at a locus informs about the evolutionary history of the sample and past population size dynamics. The Kingman coalescent is used in a generative model of molecular sequence variation to infer evolutionary parameters. However, it is well understood that inference under this model does not scale well with sample size. Here, we build on recent work based on a lower resolution coalescent process, the Tajima coalescent, to model longitudinal samples. While the Kingman coalescent models the ancestry of labeled individuals, we model the ancestry of individuals labeled by their sampling time. We propose a new inference scheme for the reconstruction of effective population size trajectories based on this model and the infinite-sites mutation model. Modeling of longitudinal samples is necessary for applications (<i>e.g.</i>, ancient DNA and RNA from rapidly evolving pathogens like viruses) and statistically desirable (variance reduction and parameter identifiability). We propose an efficient algorithm to calculate the likelihood and employ a Bayesian nonparametric procedure to infer the population size trajectory. We provide a new MCMC sampler to explore the space of heterochronous Tajima’s genealogies and model parameters. We compare our procedure with state-of-the-art methodologies in simulations and an application to ancient bison DNA sequences.
DOI: 10.15468/dl.8nqn4m
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Taraxacum nevadense H.Lindb."
 ]
}

 The dataset includes 27 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007557-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xfc3ks
title: Occurrence Download

description: A dataset containing 13300 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Quercus ilex L.)",
 "HasCoordinate is true",
 "Year is one of (1970, 1971, 1972, 1973, 1974, 1975, 1976, 1977, 1978, 1979, 1980, 1981, 1982, 1983, 1984, 1985, 1986, 1987, 1988, 1989, 1990, 1991, 1992, 1993, 1994, 1995, 1996, 1997, 1998, 1999, 2000)",
 {
 "and" : [
 "DecimalLongitude is greater than or equal to -30",
 "DecimalLongitude is less than or equal to 30",
 "DecimalLatitude is greater than or equal to 30",
 "DecimalLatitude is less than or equal to 90"
 ]
 }
 ]
}

 The dataset includes 13300 records from 113 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0305772-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25443744.v2
title: An Efficient Coalescent Model for Heterochronously Sampled Molecular Data

description: Molecular sequence variation at a locus informs about the evolutionary history of the sample and past population size dynamics. The Kingman coalescent is used in a generative model of molecular sequence variation to infer evolutionary parameters. However, it is well understood that inference under this model does not scale well with sample size. Here, we build on recent work based on a lower resolution coalescent process, the Tajima coalescent, to model longitudinal samples. While the Kingman coalescent models the ancestry of labeled individuals, we model the ancestry of individuals labeled by their sampling time. We propose a new inference scheme for the reconstruction of effective population size trajectories based on this model and the infinite-sites mutation model. Modeling of longitudinal samples is necessary for applications (e.g., ancient DNA and RNA from rapidly evolving pathogens like viruses) and statistically desirable (variance reduction and parameter identifiability). We propose an efficient algorithm to calculate the likelihood and employ a Bayesian nonparametric procedure to infer the population size trajectory. We provide a new MCMC sampler to explore the space of heterochronous Tajima’s genealogies and model parameters. We compare our procedure with state-of-the-art methodologies in simulations and an application to ancient bison DNA sequences. Supplementary materials for this article are available online including a standardized description of the materials available for reproducing the work.
DOI: 10.15468/dl.qw8gv4
title: Occurrence Download

description: A dataset containing 7523 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus garryana Douglas ex Hook."
 ]
}

 The dataset includes 7523 records from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0181109-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.137196
title: Ostracon hiératique Ifao - ODM 2177_nu_2010_00168

description: Référence : nu_2010_00168<br />Site : Deir el-Médina<br />Type : photographie<br />
DOI: 10.15468/dl.w2p47z
title: Occurrence Download

description: A dataset containing 117 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kassina decorata (Angel, 1940)"
 ]
}

 The dataset includes 117 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0295814-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.137197
title: Ostracon hiératique Ifao - ODM 2176_nu_2010_00169

description: Référence : nu_2010_00169<br />Site : Deir el-Médina<br />Type : photographie<br />
DOI: 10.15468/dl.n288w3
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Viet Nam",
 "TaxonKey is Xanthium strumarium L."
 ]
}

 The dataset includes 7 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0138176-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ook8ro
title: Occurrence Download

description: A dataset containing 444 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Poland",
 "TaxonKey is Formicidae"
 ]
}

 The dataset includes 444 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009474-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.137198
title: Ostracon hiératique Ifao - ODM 2034_nu_2010_00170

description: Référence : nu_2010_00170<br />Site : Deir el-Médina<br />Type : photographie<br />
DOI: 10.34816/ifao.archives.137199
title: Ostracon hiératique Ifao - ODM 2181_nu_2010_00171

description: Référence : nu_2010_00171<br />Site : Deir el-Médina<br />Type : photographie<br />