cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/bszjq8
title: Hormigas (Hymenoptera: Formicidae) del Bosque seco Tropical (Bs-T) de la cuenca alta del río Cauca, Colombia

description: Con base en la revisión del material depositado en el Museo de Entomología de la Universidad del Valle (MUSENUV) (Cali, Colombia) y en la búsqueda exhaustiva de la literatura que ha sido publicada por el grupo de Biología, Ecología y Manejo de Hormigas de la Universidad del Valle durante los últimos 15 años, se presenta el listado actualizado de las especies de hormigas que habitan el Bosque seco Tropical (Bs-T) del valle geográfico del río Cauca. Se implementaron diversos métodos de colecta (captura directa, trampas de caída, atracción a cebos de atún y procesamiento de hojarasca en sacos Winkler), en 13 fragmentos de bosque y sus hábitats aledaños, donde se reportan 215 especies de hormigas representadas por 63 géneros y 12 subfamilias. Los fragmentos de bosque, en contraste con otros hábitats (bosque de galería, guaduales, guadua, cultivos de caña de azúcar y potreros), conservan el 93% de la riqueza total, lo que demuestra su importancia en la conservación y mantenimiento de la diversidad regional de hormigas del bosque seco tropical.
DOI: 10.15468/pa34qv
title: Anfibios de los enclaves secos del área de influencia de los Montes de María y la Ciénaga de La Caimanera, departamento de Sucre, Colombia

description: Se realiza una descripción de la fauna anfibia asociada a tres localidades en los enclaves secos y ciénagas en el departamento de Sucre, Colombia. Se describieron aspectos de la historia natural de las especies registradas y se relacionó el grado de similitud con otras faunas previamente descritas para la región Caribe. A partir de las prospecciones realizadas se reportan especies consideradas propias de los enclaves húmedos y se amplían las distribuciones conocidas para varias especies consideradas exclusivas de las estribaciones andinas y las tierras bajas del Pacífico.
DOI: 10.5281/zenodo.19025
title: Sscm Training/Test Data

description: Training/testing data set to accompany the paper "SSCM: A method to analyze and predict the pathogenicity of sequence variants". Preprint at http://www.biorxiv.org/content/early/2015/06/26/021527.

 

Code at https://github.com/counsyl/sscm
DOI: 10.5281/zenodo.20700
title: Wordpress Blog Export, Posts From 2006--18 July, 2015.

description: An XML Wordpress export of the 440 blog posts and associated comments by Henry Rzepa up to  July 18, 2015.
DOI: 10.5281/zenodo.20609
title: Glottolog-Data: Glottolog Database 2.5

description: Hammarström, Harald & Forkel, Robert & Haspelmath, Martin & Bank, Sebastian. 2015. Glottolog 2.5. Leipzig: Max Planck Institute for Evolutionary Anthropology. (Available online at http://glottolog.org)
DOI: 10.4119/unibi/2763344
title: Toward FRP-Based Brain-Machine Interfaces - Single-Trial Classification of Fixation-Related Potentials

description: The co-registration of eye tracking and Electroencephalography (EEG) provides a holistic measure of ongoing cognitive processes. Recently, \emph{Fixation-related potentials} (FRP) have been introduced to quantify the neural activity in these bi-modal recordings. FRPs are time-locked to fixation onsets, just like event-related potentials (ERP) are locked to stimulus onsets. The merit of the FRPs is that they can be analyzed in free viewing conditions and classified on a \emph{single-trial} level. However, existing research has investigated FRPs only with very restricted and highly unnatural stimuli in simple search tasks. We present a study where we relieved many of these restrictions while retaining some control by using a gaze-contingent search task with complex and everyday objects. We obtained high classification accuracies even under the more complex and less constrained task. Furthermore, we show that our classification approach generalizes not only to different test sets from the same participant, but also across participants. These results promise to open an avenue for exploiting FRPs in EEG-based brain-machine interfaces and thus providing a novel means for intuitive human-machine interaction, for example, by providing cues to the machine which objects in a scene are relevant for a user without the need to communicate that explicitly.
DOI: 10.6084/m9.figshare.1488636
title: Proximate composition, amino acid and fatty acid composition of fish maws
DOI: 10.5281/zenodo.18050
title: Odt_10000_Series

description: Supporting information associated with the publication "New insights into single-molecule junctions using a robust, unsupervised approach to data collection and analysis", <em>J. Am. Chem. Soc.</em>, 2015, DOI: 10.1021/jacs.5b05693. This data set was obtained from automated scanning tunnelling microscopy measurements of 1,8-octanedithiol (<strong>1,8-ODT</strong>) on gold. It is provided in both raw (unsorted) and processed (algorithm-sorted) forms.
DOI: 10.5281/zenodo.20639
title: Ebewox - Orca Pbe/Def2-Svp (Ri) Sp + Qtaim Cps

description: ORCA [Neese, 2012] v3.0.3 input (.txt) and output (.out) for an UPBE [Perdew et al., 1996] computation with RI approximation and Kollmar's DIIS SCF convergence method [1996] on the EBEWOX (Cryptand(2.2.2))-rubidium electride [Cambridge Structural Database; original citation Xie et al., 2000]. Geometry (.xyz), ORCA-native wavefunction (.gbw), and ORCA's Molden wavefunction conversion (.molden) are also included.

Primary basis set for Rb was the all-electron non-relativistic SVPall [Ahlrichs and May, 2000], with an auxiliary basis automatically generated by ORCA. Primary and auxiliary bases for all other atoms were def2-SVP [Schäfer et al., 1992; Eichkorn et al., 1997]. (Note: the citation for SVPall is incorrect in the .txt file.)

The image (.png) shows the system geometry with critical points and (3,-3)--(3,-1) line paths from MultiWFN v3.3.7 [Lu and Chen, 2012].  Red arrows mark critical points that disappear in computations with a single additional diffuse function added to the Rb atom [doi:10.5281/zenodo.20644].
description: {"references": ["Ahlrichs and May, Phys Chem Chem Phys 2, 943 (2000) [doi:10.1039/A908859H]", "Eichkorn et al., Theor Chem Acc 97(1-4), 119 (1997) [doi:10.1007/s002140050244]", "Kollmar, J Chem Phys 105, 8204 (1996) [doi:10.1063/1.472674]", "Lu and Chen, J Comp Chem 33, 580 (2012) [doi: 10.1002/jcc.22885]", "Neese, WIREs Comput Mol Sci 2(1), 73 (2012) [doi:10.1002/wcms.81]", "Perdew et al., Phys Rev Lett 77, 3865 (1996) [doi:http://dx.doi.org/10.1103/PhysRevLett.77.3865]", "Sch\u00e4fer et al., J Chem Phys 97, 2571 (1992) [doi:10.1063/1.463096]", "Xie et al., JACS 122(29), 6971 (2000) [doi:10.1021/ja9943445]"]}
DOI: 10.5281/zenodo.20644
title: Ebewox - Orca Pbe/Def2-Svp +Diffuse Rb (Ri) Sp + Qtaim Cps

description: ORCA [Neese, 2012] v3.0.3 input (.txt) and output (.out) for an UPBE [Perdew et al., 1996] computation with RI approximation and Kollmar's DIIS SCF convergence method [1996] on the EBEWOX (Cryptand(2.2.2))-rubidium electride [Cambridge Structural Database; original citation Xie et al., 2000]. Geometry (.xyz), ORCA-native wavefunction (.gbw), and ORCA's Molden wavefunction conversion (.molden) are also included.

Primary basis set for Rb was the all-electron non-relativistic SVPall [Ahlrichs and May, 2000], with an auxiliary basis automatically generated by ORCA.  The Rb basis was augmented with single additional s and p diffuse functions per the 'minimal augmentation' approach of Zheng et al. (2011). Primary and auxiliary bases for all other atoms were def2-SVP [Schäfer et al., 1992; Eichkorn et al., 1997]. (Note: the citation for SVPall is incorrect in the .txt file.)

The image (.png) shows the system geometry with critical points and (3,-3)--(3,-1) line paths from MultiWFN v3.3.7 [Lu and Chen, 2012].  The (3,+1) and (3,+3) critical points marked with red arrows in the dataset without the Rb diffuse functions [doi:10.5281/zenodo.20639] are absent from these results.
description: {"references": ["Ahlrichs and May, Phys Chem Chem Phys 2, 943 (2000) [doi:10.1039/A908859H]", "Eichkorn et al., Theor Chem Acc 97(1-4), 119 (1997) [doi:10.1007/s002140050244]", "Kollmar, J Chem Phys 105, 8204 (1996) [doi:10.1063/1.472674]", "Lu and Chen, J Comp Chem 33, 580 (2012) [doi: 10.1002/jcc.22885]", "Neese, WIREs Comput Mol Sci 2(1), 73 (2012) [doi:10.1002/wcms.81]", "Perdew et al., Phys Rev Lett 77, 3865 (1996) [doi:http://dx.doi.org/10.1103/PhysRevLett.77.3865]", "Sch\u00e4fer et al., J Chem Phys 97, 2571 (1992) [doi:10.1063/1.463096]", "Xie et al., JACS 122(29), 6971 (2000) [doi:10.1021/ja9943445]", "Zheng et al., Theor Chem Acc 128(3), 295 (2011) [10.1007/s00214-010-0846-z]"]}
DOI: 10.5281/zenodo.20766
title: Automatic Synthesis Of Anthropomorphic Pulmonary Ct Phantoms - Nrrd Database

description: This dataset contains the 24 anthropomorphic pulmonary CT phantoms accompanying the manuscript "Automatic Synthesis of Anthropomorphic Pulmonary CT Phantoms" submitted to PLoS ONE.

DICOM versions can be found at http://dx.doi.org/10.5281/zenodo.32740  (doi:10.5281/zenodo.32740)
DOI: 10.5284/1032010
title: Chard Junction Quarry, Dorset: Palaeolithic Archaeological Resource

description: The Axe Valley has long been known for its Palaeolithic finds particularly from the site at Broom. Whilst research has continued at Broom , other sites have also been investigated in the valley as part of the English Heritage managed ALSF funded project Palaeolithic Rivers of South West Britain (PRoSWeB). This project was completed in March 2007. Between March 2007 and March 2009, research focussing on the Quaternary geology and Palaeolithic archaeology of south west region has been continued at selected locations by Prof Tony Brown (University of Southampton), Dr Laura Basell (University of Oxford) and Dr Phil Toms (University of Gloucestershire), with assistance from Dr Ramues Gallois and Dr Richard Scrivener (formerly British Geological Survey). As a result of funding from the University of Southampton, and the kind permission of Bardon Aggregates, an Aggregate Industries Business, Chard Junction quarry is one of the key sites at which work continued during this period. This research included monitoring the changing sedimentology as aggregate extraction progressed. On 10th July 2008, Tony Brown found two bifaces whilst working in the pit with Laura Basell and Phil Toms. The importance of these finds lies in their stratigraphic location, comparison with previous finds, potential for dating and confirmation of a Lower Palaeolithic hominin presence in the Axe Valley South West England. From March 2009, work at Chard Junction has been supported by English Heritage. This has allowed the dating of deposits from which the bifaces came, the contextualisation of the bifaces, continued monitoring of extraction and some preliminary developments of new methodologies for sites of this kind.
DOI: 10.4119/unibi/2763686
title: Data set: Head movements in bumblebees

description: Changes in flight direction in flying insects are largely due to roll, yaw and pitch rotations of their body. Head orientation is stabilized for most of the time by counter rotation. Here, we use high-speed video to analyse head- and body-movements of the bumblebee Bombus terrestris while approaching and departing from a food source located between three landmarks in an indoor flight-arena. The flight paths consist of almost straight flight segments that are interspersed with rapid turns. These short and fast yaw turns (“saccades”) are usually accompanied by even faster head yaw turns that change gaze direction. Since a large part of image rotation is thereby reduced to brief instants of time, this behavioural pattern facilitates depth perception from visual motion parallax during the intersaccadic intervals. The detailed analysis of the fine structure of the bees’ head turning movements shows that the time course of single head saccades is very stereotypical. We find a consistent relationship between the duration, peak velocity and amplitude of saccadic head movements, which in its main characteristics resembles the so-called "saccadic main sequence" in humans. The fact that bumblebee head saccades are highly stereotyped as in humans, may hint at a common principle, where fast and precise motor control is used to reliably reduce the time during which the retinal images moves. All raw data are available in the the binary matlab file “res.mat”. It contains two variables of the class struct. You can load the data using the command load('res.mat') in Matlab. The two variables “TBLFlight” “returnFlight” contain two fields: “yawAngle” and “HeadPos”. The values in yawAngle are given in degrees and HeadPos in Pixels. All data presented in the manuscript are derived from “yawAngle”.
DOI: 10.15129/a55d0576-fdff-4a0f-b0da-70e025523c7a
title: Chirped pulse Raman amplification in warm plasma: towards controlling saturation

description: Presentation of the raw datasets from an experimental campaign conducted at Strathclyde University using the TOPS lab, studying Raman amplification in plasma. 
These data lead to a publication in Scientific Reports in 2015.
More information on the dataset structure can be found in the README file.
DOI: 10.5061/dryad.p31j3/1
title: Comeault_etal_data

description: Raw data from "Coevolution of male and female reproductive traits and a cascading effect of reinforcement in Drosophila yakuba" Aaron A. Comeault, Aarti Venkat and Daniel R. Matute
DOI: 10.17036/7428fbe0-d7fe-41f5-a53a-32e9726254cd
title: Acoustic Source Characteristics, Across-Formant Integration, and Speech Intelligibility Under Competitive Conditions

description: These datasets comprise listeners’ transcriptions of sentence-length speech stimuli for Experiments 1 and 2 of the article of the same title (Roberts, Summers, and Bailey, 2015). Each spreadsheet comprises a summary worksheet and the raw data for each listener. The summary worksheet contains aggregated scores (keywords correct by tight scoring, see below) for each listener in each condition, with relevant demographic information. Subsequent worksheets comprise the raw data for each listener and stimulus. The raw data comprise: (a) the stimulus presented [Column heading: Text], (b) the listener’s response [Transcription], (c) the condition number for which the stimulus was presented [Condition] (note: condition number in article does not always correspond to that assigned when the experiment was run), (d) the number of times the listener heard the stimulus (up to 6 in this experiment), (e) the number of keywords in the stimulus, (f) the loose score (number of keywords reported correctly for which the stem of the word is correct – e.g., “type”, “types”, and “typed” would all be marked correct for keyword “typing”; the loose score was not analysed but is included for completeness), and (g) the tight score (only exactly reported keywords are marked as correct; homonyms are accepted). The mean scores (loose or tight) for each condition are computed by dividing the number of correct keywords reported for all 6 sentences in the condition by the total number of keywords.
DOI: 10.15468/ltpf2c
title: MISE Project Killarney Otter Records, 2013

description: The data set contains records of otter spraints collected during a survey carried out by the MISE Project in Killarney National Park in 2013. A small number of other otter records from Co. Kerry are also included.
DOI: 10.15468/w9bhqv
title: The Chironomidae (Diptera) of Ireland

description: The Chironomid fauna of Ireland
DOI: 10.15129/2c186689-2334-4746-955e-f9579ca15909
title: Preferential attachment of specific fluorescent dyes and dye labelled DNA sequences in a SERS multiplex

description: Chemometric analysis was performed on collected SERS spectra of fluorescence dyes and dye labelled DNA sequences to gain an insight on any form of preferential attachment that could occur in a multiplex SERS sample. Experimental parameters were altered to determine if these would effect any form of preferential attachment that was present. 

See Readme file for details on file content
DOI: 10.15468/quqlt4
title: MISE Project Roaringwater Bay Otter Records, 2012-2014

description: The data set contains records of otter spraints collected during surveys carried out by the MISE Project in Roaringwater Bay, Co. Cork between 2011 and 2014.
DOI: 10.7925/drs1.ucdlib_38376
title: 1916 Rising Postcards

description: Part of UCD Library's Curran Collection, most of these postcards were published in 1916 in the immediate aftermath of the Insurrection. They provide an excellent contemporary pictorial record of the damage to the city; one showing a "before and after" photograph of Sackville (O'Connell) Street. Some are reproductions of "under fire" photos taken by the Daily Sketch photographer and published by Easons. Other series were produced by Hely's and Coleman's publishers. The collection contains 37 distinct postcards (as well as duplicates) collected by Constantine Curran.
description: Scope and content: Item 1.H.1/11 is a duplicate of 1.H.1/2 and 1.H.1/14 is a duplicate of 1.H.1/8. UCD Library also hold duplicate copies of the following items: 1.H.1/5, 1.H.1/6, 1.H.1/7, 1.H.1/9, 1.H.1/10, 1.H.1/12, 1.H.1/24, 1.H.1/26. These duplicates were not scanned.
description: Date details: The majority of items in the collection were published in 1916. One of the postcards dates from 1922.
DOI: 10.7925/drs1.ucdlib_38377
title: Sinn Fein rebellion
DOI: 10.7925/drs1.ucdlib_38378
title: Sinn Fein rebellion, 1916
DOI: 10.7925/drs1.ucdlib_38379
title: Sinn Fein rebellion
DOI: 10.7925/drs1.ucdlib_38380
title: Sinn Fein rebellion
DOI: 10.7925/drs1.ucdlib_38381
title: Sinn Fein rebellion, 1916
DOI: 10.7925/drs1.ucdlib_38382
title: Sinn Fein rebellion, 1916
DOI: 10.7925/drs1.ucdlib_38383
title: Sinn Fein rebellion
DOI: 10.7925/drs1.ucdlib_38384
title: Sinn Fein rebellion, 1916
DOI: 10.7925/drs1.ucdlib_38385
title: O'Connell Bridge and quays Dublin
DOI: 10.7925/drs1.ucdlib_38386
title: Sinn Fein rebellion, 1916
DOI: 10.7925/drs1.ucdlib_38388
title: Sinn Fein rebellion, 1916
DOI: 10.7925/drs1.ucdlib_38389
title: Sinn Fein rebellion, 1916
DOI: 10.7925/drs1.ucdlib_38387
title: Sinn Fein rebellion, 1916
DOI: 10.7925/drs1.ucdlib_38390
title: John Daly. Thomas J. Clarke. Sean McDermott

description: Printed note on back of postcard: 'Profits on sale of these cards will be handed to the Irish National Aid and Volunteer Dependents' Fund'.
DOI: 10.7925/drs1.ucdlib_38391
title: James Connolly murdered May 12th 1916

description: Postcard showing Liberty Hall with a banner hanging from the upper story which says 'James Connolly Murdered May 12th 1916'.
DOI: 10.7925/drs1.ucdlib_38392
title: After the insurrection
DOI: 10.7925/drs1.ucdlib_38393
title: After the insurrection
DOI: 10.7925/drs1.ucdlib_38394
title: Exterior of G.P.O. after evacuation, showing broken flag-post from which Republican flag was flown
DOI: 10.7925/drs1.ucdlib_38395
title: insurrection in Dublin
DOI: 10.7925/drs1.ucdlib_38396
title: After the insurrection
DOI: 10.7925/drs1.ucdlib_38397
title: Henry Street, Dublin, looking towards Nelson's Pillar, after bombardment
DOI: 10.15468/dl.gsu9b8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Gyraulus shasi Glöer & Pešić, 2007)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091869-240626123714530/datasets/export for details.
DOI: 10.15468/dl.5v875x
title: Occurrence Download

description: A dataset containing 776 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Trichophya pilicornis (Gyllenhal, 1810)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 776 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091870-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qtddrn
title: Occurrence Download

description: A dataset containing 107 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Pentalonia nigronervosa Coquerel, 1859",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 107 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091871-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gzab79
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Amara reitteri Tschitscherine, 1894",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091872-240626123714530/datasets/export for details.
DOI: 10.15468/dl.tvueve
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Zora alpina Kulczyński, 1915",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091873-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26828362
title: S1 Table

description: <b>S1 Table. NGS data of arthropods from 10 mouse samples used for </b><b><i>δ</i></b><sup><strong>13</strong></sup><b>C fingerprinting; taxa found in ≥30% of samples are indicated in bold text.</b> “FOO” indicates frequency of occurrence for a specific taxon (out of 10 mice); “%FOO” indicates percent frequency of occurrence for a specific taxon (out of 10 mice).
DOI: 10.15468/dl.wazshm
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Bithynia kastorias Glöer, Albrecht & Wilke, 2007)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091874-240626123714530/datasets/export for details.