cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11981331.v1
title: Understanding oil and gas pneumatic controllers in the Denver-Julesburg basin using optical gas imaging

description: In the spring of 2018, a 10-day field study was conducted in Colorado’s Denver-Julesburg oil and natural gas production basin to improve information on well pad pneumatic controller (PC) populations and identify PCs with potential maintenance issues (MIs) causing excess emissions through a novel optical gas imaging (OGI) survey approach. A total of 500 natural gas-emitting PCs servicing 102 wells (4.9 PCs/well) were surveyed at 31 facilities operated by seven different companies. The PCs were characterized by their designed operational function and applications, with 83% of the PC population identified as intermittent PCs (IPCs). An OGI inspection protocol was used to investigate emissions on 447 working PCs from this set. OGI detected continuous emissions from 11.3% of observed IPCs and these were classified as experiencing some level of MIs. OGI imaging modes were observed to have a significant effect on emission detectability with high sensitivity mode detection rates being approximately 2 times higher compared to auto mode. Fourteen snapshot emission measurements (not including actuations) were conducted on IPCs in this category using a high-volume sampling device with augmented quality assurance procedures with observed emissions rates ranging from 0.1 up to 31.3 scf/hr (mean = 2.8 scf/hr). For PCs with continuous depressurization type (CPC), 36.8% had continuous emissions observed by OGI. Four supporting emission measurements were conducted on CPCs with one unit exceeding the low bleed regulatory emission threshold with an emission rate of 9.9 scf/hr (mean = 4.2 scf/hr). Additional information was collected on PC actuation events, as observed with OGI, which showed a strong correlation between observed actuation events and facility production compared to observed continuous emissions caused by MIs which did not correlate with facility production. <i>Implications</i>: A novel survey approach of pneumatic controllers at oil and natural gas production facilities in the Denver-Julesburg basin, using optical gas imaging and supporting emission measurements, was demonstrated as an effective method to identify controllers with potential maintenance issues causing excess emissions. The results of the pneumatic controller and optical gas imaging surveys improved information on pneumatic controller populations within the basin and also demonstrated the significant effect optical gas imaging modes have on emission detections.
DOI: 10.5281/zenodo.4001020
title: Annotations of three Vespula wasps. Vespula vulgaris, Vespula pensylvanica, Vespula germanica

description: The annotations and assemblies of the three wasp genomes, <em>Vespula vulgaris</em>, <em>Vespula germanica</em>, <em>Vespula pensylvanica</em>. These were annotated together based off of RNA-Seq and AUGUSTUS training with <em>Vespula vulgaris</em> which was used to speed up and improve training on the later annotations. tRNA's are included. Annotation primarily concluded with <em>funannotate. </em>These are the specific versions used in the manuscript. <strong>Please cite the paper directly.</strong>
DOI: 10.6084/m9.figshare.11981253
title: HMT_genomes.tar.gz

description: Genomes for 5 metagenome assembled genomes of archaea<br>
DOI: 10.6084/m9.figshare.11981268
title: Database of a PD1 SNP association study .docx

description: Database of an association study between systemic sclerosis and a PD1 gene polymorphism
DOI: 10.6084/m9.figshare.11981268.v1
title: Database of a PD1 SNP association study .docx

description: Database of an association study between systemic sclerosis and a PD1 gene polymorphism
DOI: 10.5281/zenodo.3903884
title: Annotations of three Vespula wasps. Vespula vulgaris, Vespula pensylvanica, Vespula germanica

description: The annotations and assemblies of the three wasp genomes, <em>Vespula vulgaris</em>, <em>Vespula germanica</em>, <em>Vespula pensylvanica</em>. These were annotated together based off of RNA-Seq and AUGUSTUS training with <em>Vespula vulgaris</em> which was used to speed up and improve training on the later annotations. tRNA's are included. Annotation primarily concluded with <em>funannotate. </em>These are the specific versions used in the manuscript. <strong>Please cite the paper directly.</strong>
DOI: 10.6084/m9.figshare.11981253.v1
title: HMT_genomes.tar.gz

description: Genomes for 5 metagenome assembled genomes of archaea<br>
DOI: 10.6084/m9.figshare.11980890
title: C Sample code from Effect of synaptic cell-to-cell transmission and recombination on the evolution of double mutants in HIV

description: Sample agent-based model simulation code written in C
DOI: 10.6084/m9.figshare.11980887
title: Fortran Sample Code from Effect of synaptic cell-to-cell transmission and recombination on the evolution of double mutants in HIV

description: Sample agent-based model simulation code written in Fortran
DOI: 10.6084/m9.figshare.11980890.v1
title: C Sample code from Effect of synaptic cell-to-cell transmission and recombination on the evolution of double mutants in HIV

description: Sample agent-based model simulation code written in C
DOI: 10.6084/m9.figshare.11980887.v1
title: Fortran Sample Code from Effect of synaptic cell-to-cell transmission and recombination on the evolution of double mutants in HIV

description: Sample agent-based model simulation code written in Fortran
DOI: 10.6084/m9.figshare.11980719
title: Original_Data.zip

description: authors can use this data to extract features and predict locations.
DOI: 10.6084/m9.figshare.11980719.v2
title: Original_Data.zip

description: authors can use this data to extract features and predict locations.
DOI: 10.6084/m9.figshare.11980719.v1
title: Original_Data.zip

description: authors can use this data to extract features and predict locations.
DOI: 10.6084/m9.figshare.11980491
title: PLOSBiol_DataSheet.xlsx

description: Datasheet (.xlsx format) containing the raw numerical and statistical data used to compile Figures 1-4, S1-S8, in our manuscript. Separate sheets are provided for each individual subfigure.
DOI: 10.6084/m9.figshare.11980491.v1
title: PLOSBiol_DataSheet.xlsx

description: Datasheet (.xlsx format) containing the raw numerical and statistical data used to compile Figures 1-4, S1-S8, in our manuscript. Separate sheets are provided for each individual subfigure.
DOI: 10.6084/m9.figshare.11980491.v3
title: PLOSBiol_DataSheet.xlsx

description: Datasheet (.xlsx format) containing the raw numerical and statistical data used to compile Figures 1-4, S1-S8, in our manuscript. Separate sheets are provided for each individual subfigure.
DOI: 10.6084/m9.figshare.11980491.v2
title: PLOSBiol_DataSheet.xlsx

description: Datasheet (.xlsx format) containing the raw numerical and statistical data used to compile Figures 1-4, S1-S8, in our manuscript. Separate sheets are provided for each individual subfigure.
DOI: 10.6084/m9.figshare.11980380
title: Local structure in water and its comparison with hexagonal ice from molecular dynamics simulations of TIP4P/2005 water model

description: Molecular simulations show that liquid water if sufficiently cooled can separate into low-density (tetrahedral) and high-density (non-tetrahedral) forms. We perform molecular dynamics simulations of TIP4P/2005 liquid water at 1 and 1000 bar and in the temperature range 280 to 200 K. Under these conditions we analyse liquid water's local structure and compare it with hexagonal ice. A spherical cut-off is used to collect nearest neighbours of oxygen atoms in the first coordination shell. Local orientational order parameters are then used to characterise the orientation in oxygen and hydrogen atoms in these molecules. At 1 and 1000 bar liquid water which is mostly 4 and 5 coordinated at 280 K becomes 4 coordinated when sufficieintly cooled. Oxygen atoms become more orientationally ordered with cooling and at temperatures less than 230 K its orientation is ice-like. Hydrogens tend to orient out-of-plane with cooling thus allowing the 4 coordinated water to form network like structures. Similar to oxygen ordering, hydrogens also prefer ice-like arrangment with supercooling.
DOI: 10.6084/m9.figshare.11980383
title: Kerguelen southern elephant seals blood stable isotopic values 2004-2018

description: Dataset relative to blood isotopic values of southern elephant seals (Mirounga leonina) from Kerguelen Islands, sampled from 2004 to 2018 (no data in 2017) at Courbet Peninsula. This dataset includes SIA relative to pups at weaning and to adult females during the breeding and/or moulting period.<br>id_ind: individual unique identifiersexe: either "M" for males or "F" for femalesstatut: "Ad" for adult females, and "Pup" for pupsmass: mass in kilogramsd13C: blood δ13C signature in ‰d15N: blood δ15N signature in ‰C:N: carbon to nitrogen mass ratio<br>
DOI: 10.6084/m9.figshare.11980359
title: Elasmosaurid phylogeny and paleobiogeography, with a reappraisal of <i>Aphrosaurus furlongi</i> from the Maastrichtian of the Moreno Formation

description: The holotype of the elasmosaurid <i>Aphrosaurus furlongi</i> from the Maastrichtian levels of the Moreno Formation is redescribed and considered a valid species based on one autapomorphy, a deep trough in the ventral surface of vertebral centra of the posterior cervicals, and the following combination of features: wide and short clavicle-interclavicle complex with concave anterior border and without posterior medial process or medial ventral keel, humerus with anterior depression, and posterior limb with accessory element on the posterior margin. The phylogenetic analysis recovered <i>A</i>. <i>furlongi</i> as an elasmosaurid within Weddellonectia. The phylogenetic analysis generated a new topology of Elasmosauridae. A new clade, Euelasmosaurida, is recovered, including all post-Cenomanian elasmosaurids other than <i>Zarafasaura oceanis</i>. Euelasmosaurida is composed of two main clades: Elasmosaurinae and Weddellonectia. The latter includes mostly Weddellian elasmosaurids, including Aristonectinae. Based on the new phylogenetic results, the evolution of key cranial and postcranial characters is discussed. Two key intervals of elasmosaurid evolutionary history are recognized: the Cenomanian, with the appearance of Euelasmosaurida, and the Santonian, with the differentiation of Weddellonectia and Elasmosaurinae.
DOI: 10.6084/m9.figshare.11980350
title: Table 3. Geomorphic response of a mountain gravel-bed river to an extreme flood in Aberdeenshire, Scotland

description: Table 3—Sediment budget statistics of each DEM of difference threshold.
DOI: 10.6084/m9.figshare.11980350.v1
title: Table 3. Geomorphic response of a mountain gravel-bed river to an extreme flood in Aberdeenshire, Scotland

description: Table 3—Sediment budget statistics of each DEM of difference threshold.
DOI: 10.6084/m9.figshare.11980344
title: Table 1. Geomorphic response of a mountain gravel-bed river to an extreme flood in Aberdeenshire, Scotland

description: Table 1—Peak discharge and rainfall during the 2015 Storm Frank storm at each gauge station on the River Dee.
DOI: 10.6084/m9.figshare.11980347
title: Table 2. Geomorphic response of a mountain gravel-bed river to an extreme flood in Aberdeenshire, Scotland

description: Table 2—Parameters used in the hydrological model CAESAR–Lisflood.
DOI: 10.6084/m9.figshare.11980344.v1
title: Table 1. Geomorphic response of a mountain gravel-bed river to an extreme flood in Aberdeenshire, Scotland

description: Table 1—Peak discharge and rainfall during the 2015 Storm Frank storm at each gauge station on the River Dee.
DOI: 10.6084/m9.figshare.11980347.v1
title: Table 2. Geomorphic response of a mountain gravel-bed river to an extreme flood in Aberdeenshire, Scotland

description: Table 2—Parameters used in the hydrological model CAESAR–Lisflood.
DOI: 10.6084/m9.figshare.11980332
title: Supplementary Material for: Overcoming Workplace Disability in IBD Patients: An Observational Study

description: <b><i>Background:</i></b> Inflammatory Bowel Disease (IBD) can have considerable effects on employment outcomes because of its disabling character. <b><i>Goals:</i></b> We aimed to investigate the impact of IBD in the workplace and to better understand the need for accommodations and adaptations. <b><i>Study:</i></b> Between November 2017 and March 2018, IBD patients were recruited from outpatient clinics in Christchurch Hospital, New Zealand. The survey assessed employment, the need for workplace accommodations and the difficulty arranging it, insurance, and disability using the item-reduced Inflammatory Bowel Disease Disability Index for self-report (IBD-DI-SR). Data were analyzed using descriptive statistics and multivariate logistic regression modeling. <b><i>Results:</i></b> One hundred twenty-three patients were included (response rate 64%), 112 of whom reported that they experienced symptoms while working (60% female, 71% Crohn’s disease, mean age 41.9 years). Ninety-one percent needed at least 1 workplace accommodation when symptoms were most severe. Almost half of the patients who needed an accommodation had difficulty arranging it. The most needed accommodations were time to go to medical appointments (71%) and easy access to a suitable toilet (71%). Being female, having less effective medication, and being distressed were associated with the need for 2 or more accommodations, difficulty in arranging accommodations, and not asking for needed accommodation. <b><i>Conclusions:</i></b> Many IBD patients need accommodations at work while symptomatic in order to overcome workplace disability, which can be difficult to arrange. Improved resources are needed to inform employees and employers about the disease, the possibilities for workplace accommodations, and practical strategies to request them.
DOI: 10.6084/m9.figshare.11980302
title: Supplementary Material for: Problematic Alcohol and Drug Use Is Associated with Low Self-Directedness and Cooperativeness

description: <b><i>Background:</i></b> Personality traits, such as self-directedness (SD) and cooperativeness (CO), may be indicative of problematic alcohol and/or drug use. <b><i>Objectives:</i></b> The aim of this study was to quantify the association of substance use with SD and CO in a large cohort of adolescents. <b><i>Method:</i></b> A total of 6,917 individuals (58% women) at the age of 18 who had filled in the Alcohol Use Disorder Identification Test (AUDIT) and Drug Use Disorder Identification Test (DUDIT), and the SD and CO scales from the Temperament and Character ­Inventory, as part of the Child and Adolescent Twin study in Sweden were included in the analyses. <b><i>Results:</i></b> High AUDIT scores (&gt;15) were found in 2.4% of the population and high DUDIT scores (&gt;7) in 1.2% of the population. Total score on the AUDIT was negatively correlated (<i>p</i> &lt; 0.001) with SD (<i>r</i> = –0.18) and CO (<i>r</i> = –0.15), as well as total DUDIT with SD (<i>r</i> = –0.11) and CO (<i>r</i> = –0.08). The risk of high AUDIT (&gt;15) and DUDIT (&gt;7) was highest for those with a low (1 standard deviation below mean) SD score (ORs 4.1 and 4.5, <i>p</i> &lt; 0.001) and a low CO score (ORs 3.5 and 4.5, <i>p</i> &lt; 0.001). However, at 1 standard deviation above mean, no association between alcohol or drug use and SD or CO was seen. Using SD and CO scores to predict AUDIT &gt;15 or DUDIT &gt;7 yielded a sensitivity between 62.4 and 71.3% and a specificity between 64.9 and 70.4%. <b><i>Conclusions:</i></b> Personality traits of low SD and CO are associated with increased alcohol and drug use. These findings support the notion that personality traits can be used to identify individuals at high risk of substance abuse.
DOI: 10.5281/zenodo.4001001
title: Spreadsheets: step by step of data reconciliation

description: Planilhas desenvolvidas para o artigo intitulado “Application of data reconciliation in a water balance as a tool for optimizing water use at a university in Brazil”. Ele foi submetido no 26th IJCIEOM – International Joint Conference on Industrial Engineering and Operations Management; 1. Na planilha “Database_IJCIEOM_2020” estão todos os dados usados na pesquisa. 2. A planilha denominada “Coverage test” refere-se ao teste estatistico feito com a media dos blocos MT e FS. 3. Em “IJCIEOM_2020.MT” e “IJCIEOM_2020.FS” encontra-se o desenvolvimento da incerteza das medições de vazão de água do CJA-UFSB. 4. As planilhas “nhemu_seiqué.MT” e “nhemu_seiqué.FS” são usadas no programa de KALID (2020). Para rodar no programa é necessário renomear para “nhemu_seiqué”. English: Spreadsheets developed for the article entitled “Application of data reconciliation in a water balance as a tool for optimizing water use at a university in Brazil”. He was submitted to the 26th IJCIEOM - International Joint Conference on Industrial Engineering and Operations Management; 1. In the spreadsheet “Database_IJCIEOM_2020” are all the data used in the research. 2. The spreadsheet called “Coverage test” refers to the statistical test done with the average of blocks MT and FS. 3. In “IJCIEOM_2020.MT” and “IJCIEOM_2020.FS” there is the development of the uncertainty of water flow measurements from CJA-UFSB. 4. The spreadsheets “nhemu_seiqué.MT” and “nhemu_seiqué.FS” are used in the KALID program (2020). To run the program it is necessary to rename it to “nhemu_seiqué”.
description: Abstract of article. This work proposes a data reconciliation (DR)-linked water balance at the Jorge Amado campus (CJA) of the Federal University of Southern Bahia (UFSB), located in the municipality of Itabuna, Bahia, Brazil. Thus, it is intended to support future policies to reduce water use at the university, as well as the es-tablishment of strategies for continuous improvement and process control. To that end, this article maps, quantifies and qualifies water flows, taking into account measurement uncertainties, so that reconciliation can take place efficiently. As a result, inadequacies in the system were identified, such as the existence of under-measurement, the possibility of leaks, or misuse of water in the institution. In ad-dition, a more reliable mass balance was established, reducing system uncertainty and closing existing imbalances attesting the effectiveness of DR in the system. Finally, the statistical evaluation of the data reconciliation residue is detailed and ways of continuing the research are proposed.
DOI: 10.6084/m9.figshare.11980293
title: Supplementary Material for: Development and Validation of a Short-Form Internet Overuse Screening Questionnaire for Adults

description: <b><i>Aims:</i></b> The aim of the current study was to develop and validate a short-form of the internet overuse screening questionnaire (IOS-Qs). <b><i>Methods:</i></b> A total of 571 adults were recruited from a representative, stratified, and multistage cluster sample. Among participants, 188 and 383 were used in the development and validation of the IOS-Qs, respectively. <b><i>Results:</i></b> Experts’ ratings and Rasch model analyses led to the selection of 8 items from the IOS-Qs; latent-class analysis using these 8 items revealed an estimated prevalence of 8.6% (33 out of 383) of problematic internet over-users. Problematic internet over-users were positively associated with a 1-year prevalence rate of any mental disorder (OR 3.08, <i>p</i> = 0.008), mood disorder (OR 7.11, <i>p</i> = 0.003), and depressive disorder (OR 5.22, <i>p</i> = 0.016). The receiver operating characteristic curves identified an optimal cutoff score of 9.5 for differentiating problematic internet over-users from unproblematic internet users with 94% sensitivity and 94% specificity. <b><i>Conclusion:</i></b> The results suggest that the IOS-Qs was valid, and items including social isolation were crucial to the brief distinction of at-risk internet users. Because of its brevity, the questionnaire can be effectively administered as a large-scale survey.
DOI: 10.6084/m9.figshare.11980302.v1
title: Supplementary Material for: Problematic Alcohol and Drug Use Is Associated with Low Self-Directedness and Cooperativeness

description: <b><i>Background:</i></b> Personality traits, such as self-directedness (SD) and cooperativeness (CO), may be indicative of problematic alcohol and/or drug use. <b><i>Objectives:</i></b> The aim of this study was to quantify the association of substance use with SD and CO in a large cohort of adolescents. <b><i>Method:</i></b> A total of 6,917 individuals (58% women) at the age of 18 who had filled in the Alcohol Use Disorder Identification Test (AUDIT) and Drug Use Disorder Identification Test (DUDIT), and the SD and CO scales from the Temperament and Character ­Inventory, as part of the Child and Adolescent Twin study in Sweden were included in the analyses. <b><i>Results:</i></b> High AUDIT scores (&gt;15) were found in 2.4% of the population and high DUDIT scores (&gt;7) in 1.2% of the population. Total score on the AUDIT was negatively correlated (<i>p</i> &lt; 0.001) with SD (<i>r</i> = –0.18) and CO (<i>r</i> = –0.15), as well as total DUDIT with SD (<i>r</i> = –0.11) and CO (<i>r</i> = –0.08). The risk of high AUDIT (&gt;15) and DUDIT (&gt;7) was highest for those with a low (1 standard deviation below mean) SD score (ORs 4.1 and 4.5, <i>p</i> &lt; 0.001) and a low CO score (ORs 3.5 and 4.5, <i>p</i> &lt; 0.001). However, at 1 standard deviation above mean, no association between alcohol or drug use and SD or CO was seen. Using SD and CO scores to predict AUDIT &gt;15 or DUDIT &gt;7 yielded a sensitivity between 62.4 and 71.3% and a specificity between 64.9 and 70.4%. <b><i>Conclusions:</i></b> Personality traits of low SD and CO are associated with increased alcohol and drug use. These findings support the notion that personality traits can be used to identify individuals at high risk of substance abuse.