cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3466937
title: Chronicle of Nature - Phenology of Plants of State Nature Reserve Kivach

description: Plants Phenology dataset compiled in the context of Chronicle of Nature program in State Nature Reserve Kivach (Russian Federation) consisting of 3621 records collected during 48 years between 1966 and 2013.
description: This dataset export was created by EarthCape software platform version 18.3.1.17814
DOI: 10.5281/zenodo.3466938
title: Chronicle of Nature - Phenology of Plants of State Nature Reserve Kivach

description: Plants Phenology dataset compiled in the context of Chronicle of Nature program in State Nature Reserve Kivach (Russian Federation) consisting of 3621 records collected during 48 years between 1966 and 2013.
description: This dataset export was created by EarthCape software platform version 18.3.1.17814
DOI: 10.5281/zenodo.3466939
title: Chronicle of Nature - Phenology of Plants of Pechoro-Ilych State Nature Reserve

description: Plants Phenology dataset compiled in the context of Chronicle of Nature program in Pechoro-Ilych State Nature Reserve (Russian Federation) consisting of 3469 records collected during 80 years between 1936 and 2015.
description: This dataset export was created by EarthCape software platform version 18.3.1.17814
DOI: 10.5281/zenodo.10811105
title: Efficient statistical method for single-cell QTL analysis

description: This upload contains data objects associated with our paper "Efficient statistical method for single-cell QTL analysis" introducing the SAIGE-QTL method (preprint available soon!).
DOI: 10.5281/zenodo.10811106
title: Efficient statistical method for single-cell QTL analysis

description: This upload contains data objects associated with our paper "Efficient statistical method for single-cell QTL analysis" introducing the SAIGE-QTL method (preprint available soon!).
DOI: 10.5281/zenodo.10883787
title: A method to estimate prey density from single-camera images: a case study with chinstrap penguins and Antarctic krill dataset

description: Estimating the densities of marine prey observed in animal-borne video loggers when encountered by foraging predators represents an important challenge for understanding predator-prey interactions in the marine environment. We used video images collected during the foraging trip of one chinstrap penguin (Pygoscelis antarcticus) from Cape Shirreff, Livingston Island, Antarctica to develop a novel approach for estimating the density of Antarctic krill (Euphausia superba) encountered during foraging activities. Using the open-source Video and Image Analytics for a Marine Environment (VIAME), we trained a neural network model to identify video frames containing krill. Our image classifier has an overall accuracy of 73%, with a positive predictive value of 83% for prediction of frames containing krill. We then developed a method to estimate the volume of water imaged, thus the density (N·m-3) of krill, in the 2-dimensional images. The method is based on the maximum range from the camera where krill remain visibly resolvable, mean krill length is known, and orientation distribution is assumed to be uniform. From 1,932 images identified as containing krill, we manually identified a subset of 124 images from across the video record that contained resolvable and unresolvable krill necessary to estimate the resolvable range and imaged volume for the video sensor. Krill swarm density encountered by the penguins ranged from 2 to 307 krill·m-3 and mean density of krill was 48 krill·m-3 (sd = 61 krill·m-3). Mean krill biomass density was 25 g·m-3. Our frame-level image classifier model and krill density estimation method provide a new approach to efficiently process video-logger data and provide key information on prey aggregations that may affect predator foraging performance. The approach should be directly applicable to other marine predators feeding on aggregations of prey.
DOI: 10.5281/zenodo.10883788
title: A method to estimate prey density from single-camera images: a case study with chinstrap penguins and Antarctic krill dataset

description: Estimating the densities of marine prey observed in animal-borne video loggers when encountered by foraging predators represents an important challenge for understanding predator-prey interactions in the marine environment. We used video images collected during the foraging trip of one chinstrap penguin (Pygoscelis antarcticus) from Cape Shirreff, Livingston Island, Antarctica to develop a novel approach for estimating the density of Antarctic krill (Euphausia superba) encountered during foraging activities. Using the open-source Video and Image Analytics for a Marine Environment (VIAME), we trained a neural network model to identify video frames containing krill. Our image classifier has an overall accuracy of 73%, with a positive predictive value of 83% for prediction of frames containing krill. We then developed a method to estimate the volume of water imaged, thus the density (N·m-3) of krill, in the 2-dimensional images. The method is based on the maximum range from the camera where krill remain visibly resolvable, mean krill length is known, and orientation distribution is assumed to be uniform. From 1,932 images identified as containing krill, we manually identified a subset of 124 images from across the video record that contained resolvable and unresolvable krill necessary to estimate the resolvable range and imaged volume for the video sensor. Krill swarm density encountered by the penguins ranged from 2 to 307 krill·m-3 and mean density of krill was 48 krill·m-3 (sd = 61 krill·m-3). Mean krill biomass density was 25 g·m-3. Our frame-level image classifier model and krill density estimation method provide a new approach to efficiently process video-logger data and provide key information on prey aggregations that may affect predator foraging performance. The approach should be directly applicable to other marine predators feeding on aggregations of prey.
DOI: 10.6084/m9.figshare.25467664
title: <b>Data and simulation outputs underlying the article: </b><b><i>Bringing traits back in the equation: A roadmap to understand species redistribution</i></b> (Comte et al. 2024 Global Change Biology; DOI:10.1111/gcb.17271).

description: These data support the analyses and figures presented in Comte et al. 2024 (Global Change Biology; DOI:10.1111/gcb.17271).Ecological and evolutionary theories have proposed that species traits should be important in mediating species responses to contemporary climate change; yet empirical evidence has so far provided mixed evidence for the role of behavioral, life history or ecological characteristics in facilitating or hindering species range shifts.Table A1 provides a brief synthesis of the relevant empirical studies linking species traits to contemporary range shifts (used in Figure 3).Table A2a provides outputs of simulations used to discuss the extent to which range shifts-trait associations at the leading edge are mediated by climate exposure, thereby blurring the perceived predictive power of traits (used in Figure 4).Table A2b provides outputs of simulations used to discuss the extent to which range shifts-trait associations at the trailing edge are mediated by climate exposure, thereby blurring the perceived predictive power of traits (used in Figure 4).Table A3a provides morphological traits for birds used to assess functional biases in species redistribution research (used in Figure 5).Table A3b provides morphological traits for fishes used to assess functional biases in species redistribution research (used in figure 5).
DOI: 10.6084/m9.figshare.25483660
title: Data of microwave scan of PLA sample with 90% and 10% infill.

description: Data of microwave scan of PLA sample with different infill densities (90% and 10% in each half). For purpose of measurment, a set of samples (made from blue PLA made by ROSA3D) was prepared, differing only in the filling density. Each measurment was carried out every 3 layers of printed sample.
DOI: 10.6084/m9.figshare.25483660.v1
title: Data of microwave scan of PLA sample with 90% and 10% infill.

description: Data of microwave scan of PLA sample with different infill densities (90% and 10% in each half). For purpose of measurment, a set of samples (made from blue PLA made by ROSA3D) was prepared, differing only in the filling density. Each measurment was carried out every 3 layers of printed sample.
DOI: 10.6073/pasta/93f7635890ffeca3754efcd4f1f11ddb
title: Seedling emergence and biomass data of nine dryland plant species characterizing the impact of soil residual auxin herbicide across two soil types and water pulse events on greenhouse growth; Las Cruces, New Mexico, Spring 2021

description: Synthetic-auxin herbicides are often used to control woody plants and aid in grassland restoration. Seed-based restoration is common alongside herbicide applications and there may be unintended effects of these herbicides on dryland plant species at the seed and seedling stages. Additionally, abiotic conditions at the time of herbicide application may influence herbicide-soil-plant interactions. We conducted a greenhouse study to examine the effects of a common shrub-control herbicide mix and its interaction with soil type and a post-herbicide water pulse on common desert plant seeds and seedlings. In this greenhouse study, we found that a subset of species responded negatively to soil residual herbicide activity of a mixture of aminopyralid, clopyralid, and triclopyr at the seed and seedling stages. Species sensitive to soil herbicide residues were primarily shrub and forb species that are often the target species of herbicide applications for woody plant control, such as Prosopis glandulosa (honey mesquite) and Larrea tridentata (creosote bush). However, two shrub species (Atriplex canescens [four-wing saltbush] and Yucca elata [soaptree yucca]) and one perennial grass species (Digitaria californica [Arizona cottontop]), which are used in dryland restoration projects, were found to be particularly sensitive to soil residual herbicide activity. Thus, if using these herbicides to control woody plants and restore herbaceous vegetation via active seeding or relying on the in situ seed bank, considerations should be given to what species are used in the seed mix, what species are already present in the soil seed bank, and other details of the circumstances of herbicide application.
DOI: 10.6084/m9.figshare.25483675
title: Measured S11 parameter of Protopasta PLA with 1.2 mm by 2.4 mm contamination of more conductive material.

description: Data of scan of the sample made from Protopasta PLA conductive.
DOI: 10.60520/ieda/113159
title: U-Pb data of calcite slickenfibers constraining the main phase of tectonic activity of the major regional fault zones in the eastern Jura Mountains

description: This dataset consists of U-Pb LA-ICP-MS data of calcite slickenfibers and veins formed during the main phase of tectonic activity of the major regional fault zones in the eastern Jura Mountains. U-Pb analyses were carried out at the Institute of Geochemistry and Petrology at ETH Zurich using an ASI RESOlution S 155, excimer (ArF, 193 nm) laser ablation system coupled to a Thermo Element XR sector-field ICP-MS. All samples originate from outcrops and a deep boreholes in central northern Switzerland.
description: Herfried Madritsch, Nathan Looser, Raphael Schneeberger, Stephan Wohlwend, Marcel Guillong, Alexander Malz (accepted manuscript, Tectonics). "Reconstructing the evolution of foreland fold-and-thrust belts using U Pb calcite dating: an integrated case-study from the easternmost Jura Mountains (Switzerland)"
DOI: 10.5281/zenodo.10884008
title: Trajectory Data for publication

description: Supplementary Data
DOI: 10.5281/zenodo.5826279
title: Trajectory Data for publication

description: Supplementary Data
DOI: 10.5281/zenodo.5826280
title: Trajectory Data for publication

description: Supporting Data
DOI: 10.6084/m9.figshare.25483696
title: S11 measurement of test sample made from <i>colorFabb Copperfill filament</i>

description: S11 measurement of test sample made from <i>colorFabb Copperfill filament</i>, which can be converted to a form of phase and magnitude of the signal.
DOI: 10.6084/m9.figshare.25483696.v1
title: S11 measurement of test sample made from <i>colorFabb Copperfill filament</i>

description: S11 measurement of test sample made from <i>colorFabb Copperfill filament</i>, which can be converted to a form of phase and magnitude of the signal.
DOI: 10.6084/m9.figshare.22354048
title: Core muscle strengthening exercises in the management of hip osteoarthritis: outcomes of a 12-week programme

description: Osteoarthritis (OA) is caused by the destruction of the joint cartilage. Programmes based on quadriceps strengthening are now evidence-based but recently more importance is being given to optimal core stability. This study aimed at exploring the effects of a 12-week core exercise programme on pain and functional levels in patients with hip OA. A randomised controlled trial was carried out, with 60 participants randomly allocated into 3 groups. Participants in the control group received no intervention, whereas the others performed hip and hip and core exercises for a period of 12 weeks. All participants were assessed using the Numeric Pain Rating Scale (NPRS), Western Ontario McMaster Universities Arthritis Index (WOMAC), 6 min Walk Test (6MWT), muscle testing and core stability at baseline and on completion of the 12-week exercise programme. Ethical approval was obtained from the University of Malta’s Faculty Research Ethics Committee REC FORM V_15062020 6302 and ClinicalTrials.gov Identifier: NCT04771936 Statistically significant improvements for participants in the hip and core exercise group were obtained in the 6MWT (<i>p</i> = .001), NPRS (<i>p</i> = .009), WOMAC (<i>p</i> = .005), core stability (<i>p</i> = .001). Participants enrolled in the hip exercise group also had significant improvements, in the 6MWD (<i>p</i> &lt; .001); NPRS (<i>p</i> = .035) and WOMAC (<i>p</i> &lt; .001) but not Core stability(<i>p</i> = .704). Participants in the control group registered no changes. A 12-week exercise programme resulted in clinical and statistically significant improvements, ones mostly pronounced in the hip and core exercise group.
DOI: 10.6084/m9.figshare.22323411
title: Muscle Energy Techniques in patients with COPD: a randomised controlled trial

description: Physiotherapy plays a major role in long-term management of COPD. The aim of this study was to evaluate the effects of a 4-week muscle energy technique programme on pulmonary function measures, functional endurance capacity, chest wall mobility and ADLs in patients with COPD. A parallel-group, randomised controlled trial was adopted. 108 participants with COPD were recruited and randomly assigned to the intervention or control group. The intervention group received MET interventions, three-times weekly for 4 consecutive weeks, while the control group continued with their standard medical treatment. The study is clinically registered (ClinicalTrials.gov Identifier: NCT04773860). Statistically significant improvements in pulmonary function (<i>p</i> &lt; 0.001), chest measurements (<i>p</i> &lt; 0.001) and ADLs (<i>p</i> &lt; 0.001) were observed for participants in the intervention group when compared to baseline measures. Clinical but not statistically significant improvements in the 6MWT were also noted (<i>p</i> = 0.08), outcomes which were not observed in participants enrolled in the control group. This study concludes that METs can be used as an adjunct with other non-pharmacological treatments for patients with COPD to help manage their shortness of breath, improve their respiratory function and hence, as a result, improve their activities of daily living.
DOI: 10.6084/m9.figshare.22354048.v1
title: Core muscle strengthening exercises in the management of hip osteoarthritis: outcomes of a 12-week programme

description: Osteoarthritis (OA) is caused by the destruction of the joint cartilage. Programmes based on quadriceps strengthening are now evidence-based but recently more importance is being given to optimal core stability. This study aimed at exploring the effects of a 12-week core exercise programme on pain and functional levels in patients with hip OA. A randomised controlled trial was carried out, with 60 participants randomly allocated into 3 groups. Participants in the control group received no intervention, whereas the others performed hip and hip and core exercises for a period of 12 weeks. All participants were assessed using the Numeric Pain Rating Scale (NPRS), Western Ontario McMaster Universities Arthritis Index (WOMAC), 6 min Walk Test (6MWT), muscle testing and core stability at baseline and on completion of the 12-week exercise programme. Ethical approval was obtained from the University of Malta’s Faculty Research Ethics Committee REC FORM V_15062020 6302 and ClinicalTrials.gov Identifier: NCT04771936 Statistically significant improvements for participants in the hip and core exercise group were obtained in the 6MWT (<i>p</i> = .001), NPRS (<i>p</i> = .009), WOMAC (<i>p</i> = .005), core stability (<i>p</i> = .001). Participants enrolled in the hip exercise group also had significant improvements, in the 6MWD (<i>p</i> &lt; .001); NPRS (<i>p</i> = .035) and WOMAC (<i>p</i> &lt; .001) but not Core stability(<i>p</i> = .704). Participants in the control group registered no changes. A 12-week exercise programme resulted in clinical and statistically significant improvements, ones mostly pronounced in the hip and core exercise group.
DOI: 10.6084/m9.figshare.22323411.v1
title: Muscle Energy Techniques in patients with COPD: a randomised controlled trial

description: Physiotherapy plays a major role in long-term management of COPD. The aim of this study was to evaluate the effects of a 4-week muscle energy technique programme on pulmonary function measures, functional endurance capacity, chest wall mobility and ADLs in patients with COPD. A parallel-group, randomised controlled trial was adopted. 108 participants with COPD were recruited and randomly assigned to the intervention or control group. The intervention group received MET interventions, three-times weekly for 4 consecutive weeks, while the control group continued with their standard medical treatment. The study is clinically registered (ClinicalTrials.gov Identifier: NCT04773860). Statistically significant improvements in pulmonary function (<i>p</i> &lt; 0.001), chest measurements (<i>p</i> &lt; 0.001) and ADLs (<i>p</i> &lt; 0.001) were observed for participants in the intervention group when compared to baseline measures. Clinical but not statistically significant improvements in the 6MWT were also noted (<i>p</i> = 0.08), outcomes which were not observed in participants enrolled in the control group. This study concludes that METs can be used as an adjunct with other non-pharmacological treatments for patients with COPD to help manage their shortness of breath, improve their respiratory function and hence, as a result, improve their activities of daily living.
DOI: 10.5517/ccdc.csd.cc1nsgrn
title: CCDC 1542862: Experimental Crystal Structure Determination

description: Related Article: Wanping Qian, Shengsheng Wei, Changjiang Yu, Yingzhu Sun, Hanqiong Li, Tingting Yu, Hongtao Zhang, Yang Li, Lijuan Jiao, Erhong Hao|2024|Inorg.Chem.|63|5432|doi:10.1021/acs.inorgchem.3c04036
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1nsgvr
title: CCDC 1542865: Experimental Crystal Structure Determination

description: Related Article: Wanping Qian, Shengsheng Wei, Changjiang Yu, Yingzhu Sun, Hanqiong Li, Tingting Yu, Hongtao Zhang, Yang Li, Lijuan Jiao, Erhong Hao|2024|Inorg.Chem.|63|5432|doi:10.1021/acs.inorgchem.3c04036
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1pm2hw
title: CCDC 1567468: Experimental Crystal Structure Determination

description: Related Article: Wanping Qian, Shengsheng Wei, Changjiang Yu, Yingzhu Sun, Hanqiong Li, Tingting Yu, Hongtao Zhang, Yang Li, Lijuan Jiao, Erhong Hao|2024|Inorg.Chem.|63|5432|doi:10.1021/acs.inorgchem.3c04036
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc20rnk0
title: CCDC 1869782: Experimental Crystal Structure Determination

description: Related Article: Wanping Qian, Shengsheng Wei, Changjiang Yu, Yingzhu Sun, Hanqiong Li, Tingting Yu, Hongtao Zhang, Yang Li, Lijuan Jiao, Erhong Hao|2024|Inorg.Chem.|63|5432|doi:10.1021/acs.inorgchem.3c04036
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bfm0f
title: CCDC 2158034: Experimental Crystal Structure Determination

description: Related Article: Maiko J. Askari, Jeremy D. Kallick, Charles C. L. McCrory|2024|J.Am.Chem.Soc.|146|7439|doi:10.1021/jacs.3c12783
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gyqw1
title: CCDC 2292694: Experimental Crystal Structure Determination

description: Related Article: Yingying Pan, Hongrui Tian, Zhiping Zheng|2024|Inorg.Chem.|63|5487|doi:10.1021/acs.inorgchem.3c04362
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gyqx2
title: CCDC 2292695: Experimental Crystal Structure Determination

description: Related Article: Yingying Pan, Hongrui Tian, Zhiping Zheng|2024|Inorg.Chem.|63|5487|doi:10.1021/acs.inorgchem.3c04362
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.