cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.rnr8wr
title: Occurrence Download

description: A dataset containing 17924 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "DatasetKey is Données ONF faune-flore-fonge",
 "DatasetKey is SILENE-FAUNE-PACA - ONF_2017_12_18"
 ]
 },
 "GadmGid is FRA.1_1",
 "TaxonKey is Coleoptera"
 ]
}

 The dataset includes 17924 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0112371-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tw2e49
title: Occurrence Download

description: A dataset containing 40 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tricalysia schliebenii Robbr."
 ]
}

 The dataset includes 40 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0128261-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kp2hwf
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Baccharis albida Hook. & Arn."
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107200-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nqhv6k
title: Occurrence Download

description: A dataset containing 449660 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Geometry POLYGON((0.04395 61.50173,-4.43848 61.29135,-9.53613 59.55659,-9.7998 57.35024,-7.33887 55.60318,-5.49316 55.10352,-4.79004 54.39335,-5.31738 53.72272,-5.93262 52.13349,-7.0752 50.87531,-8.12988 49.29647,-6.02051 49.06667,-3.47168 49.69606,-1.53809 50.09239,0.57129 50.31741,2.50488 51.59072,3.03223 53.14677,0.04395 61.50173))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "or" : [
 "TaxonKey is Phaeophyceae",
 "TaxonKey is Chlorophyta",
 "TaxonKey is Rhodophyta"
 ]
 }
 ]
}

 The dataset includes 449660 records from 129 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0136035-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rp4jjs
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "TaxonKey is Bacopa monnierioides (Cham.) B.L.Rob."
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107207-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.edmxxz
title: Occurrence Download

description: A dataset containing 1767 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aphidius ervi Haliday, 1834"
 ]
}

 The dataset includes 1767 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126114-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6vxf8g
title: Occurrence Download

description: A dataset containing 74929 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-5000.0",
 "Geometry POLYGON((-167 17,40 17,40 72,-167 72,-167 17))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Picea sitchensis (Bong.) Carrière",
 "Year 1980-2024"
 ]
}

 The dataset includes 74929 records from 185 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0128206-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25568739
title: STREAM IM Raw Data.xlsx

description: The Student Trainee Resident Experiences in Medicine (STREAM) study aims to better understand how residents feel regarding their training, mentorship, and overall well-being so that we can identify potential areas of improvement and intervention. Our data set contains survey responses from Internal Medicine residents in the United States.
DOI: 10.15468/dl.gzuhr4
title: Occurrence Download

description: A dataset containing 737 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Lontra longicaudis (Olfers, 1818)"
 ]
}

 The dataset includes 737 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0135040-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ku5tq6
title: Occurrence Download

description: A dataset containing 483 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lonchitis hirsuta L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 483 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0140856-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mea2s3
title: Occurrence Download

description: A dataset containing 123 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "OccurrenceStatus is Present",
 "TaxonKey is Cabomba caroliniana A.Gray"
 ]
}

 The dataset includes 123 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107198-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x2s2kr
title: Occurrence Download

description: A dataset containing 2362 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Observation"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Phoenix dactylifera L."
 ]
}

 The dataset includes 2362 records from 112 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0135047-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25041927.v1
title: Matrin-3 acts as a potential biomarker and promotes hepatocellular carcinoma progression by interacting with cell cycle-regulating genes

description: Hepatocellular carcinoma (HCC) is one of the leading causes of cancer-related mortality worldwide. The oncogenic role of Matrin-3 (MATR3), an a nuclear matrix protein, in HCC remains largely unknown. Here, we document the biological function of MATR3 in HCC based on integrated bioinformatics analysis and functional studies. According to the TCGA database, MATR3 expression was found to be positively correlated with clinicopathological characteristics in HCC. The receiver operating characteristic (ROC) curve and Kaplan-Meier (KM) curve displayed the diagnostic and prognostic potentials of MATR3 in HCC patients, respectively. Pathway enrichment analysis represented the enrichment of MATR3 in various molecular pathways, including the regulation of the cell cycle. Functional assays in HCC cell lines showed reduced proliferation of cells with stable silencing of MATR3. At the same time, the suppressive effects of MATR3 depletion on HCC development were verified by xenograft tumor experiments. Moreover, MATR3 repression also resulted in cell cycle arrest by modulating the expression of cell cycle-associated genes. In addition, the interaction of MATR3 with cell cycle-regulating factors in HCC cells was further corroborated with co-immunoprecipitation and mass spectrometry (Co-IP/MS). Furthermore, CIBERSORT and TIMER analyses showed an association between MATR3 and immune infiltration in HCC. In general, this study highlights the novel oncogenic function of MATR3 in HCC, which could comprehensively address how aberrant changes in the cell cycle promote HCC development. MATR3 might serve as a prognostic predictor and therapeutic target for HCC patients.
DOI: 10.6084/m9.figshare.25215430
title: B-cell ALL with SOX11 gene amplification associates with a worse outcome

description: Copy number variation (CNV) of certain genes in pediatric Acute Lymphoblastic Leukemia (ALL) impacts gene expression levels. Here, we aimed to investigate the potential prognostic utility of CNVs in pediatric B-ALL and T-ALL. Using genomics files representing cases from the TARGET-ALL-P2 dataset, genes commonly involved in ALL development were analyzed for CNVs. Case IDs representing increased copy numbers for <i>SOX11</i>, <i>PDGFRB</i>, and <i>MDK</i> represented a worse overall survival probability specifically for B-ALL (logrank p=0.021, p=0.0052, p=0.019, respectively). These data support the continued investigation of using CNVs for clinical prognostic biomarkers for pediatric B-ALL
DOI: 10.6084/m9.figshare.25215430.v1
title: B-cell ALL with SOX11 gene amplification associates with a worse outcome

description: Copy number variation (CNV) of certain genes in pediatric Acute Lymphoblastic Leukemia (ALL) impacts gene expression levels. Here, we aimed to investigate the potential prognostic utility of CNVs in pediatric B-ALL and T-ALL. Using genomics files representing cases from the TARGET-ALL-P2 dataset, genes commonly involved in ALL development were analyzed for CNVs. Case IDs representing increased copy numbers for <i>SOX11</i>, <i>PDGFRB</i>, and <i>MDK</i> represented a worse overall survival probability specifically for B-ALL (logrank p=0.021, p=0.0052, p=0.019, respectively). These data support the continued investigation of using CNVs for clinical prognostic biomarkers for pediatric B-ALL
DOI: 10.15468/dl.wb8t23
title: Occurrence Download

description: A dataset containing 289 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anthracothorax recurvirostris (Swainson, 1822)"
 ]
}

 The dataset includes 289 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107155-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25018577
title: Integrated analysis of <i>FHIT</i> gene alterations in cancer

description: The Fragile Histidine Triad Diadenosine Triphosphatase (<i>FHIT</i>) gene is located in the Common Fragile Site FRA3B and encodes an enzyme that hydrolyzes the dinucleotide Ap3A. Although <i>FHIT</i> loss is one of the most frequent copy number alterations in cancer, its relevance for cancer initiation and progression remains unclear. <i>FHIT</i> is frequently lost in cancers from the digestive tract, which is compatible with being a cancer driver event in these tissues. However, <i>FHIT</i> loss could also be a passenger event due to the inherent fragility of the FRA3B locus. Moreover, the physiological relevance of FHIT enzymatic activity and the levels of Ap3A is largely unclear. We have conducted here a systematic pan-cancer analysis of <i>FHIT</i> status in connection with other mutations and phenotypic alterations, and we have critically discussed our findings in connection with the literature to provide an overall view of FHIT implications in cancer.
DOI: 10.6084/m9.figshare.25018577.v2
title: Integrated analysis of <i>FHIT</i> gene alterations in cancer

description: The Fragile Histidine Triad Diadenosine Triphosphatase (<i>FHIT</i>) gene is located in the Common Fragile Site FRA3B and encodes an enzyme that hydrolyzes the dinucleotide Ap3A. Although <i>FHIT</i> loss is one of the most frequent copy number alterations in cancer, its relevance for cancer initiation and progression remains unclear. <i>FHIT</i> is frequently lost in cancers from the digestive tract, which is compatible with being a cancer driver event in these tissues. However, <i>FHIT</i> loss could also be a passenger event due to the inherent fragility of the FRA3B locus. Moreover, the physiological relevance of FHIT enzymatic activity and the levels of Ap3A is largely unclear. We have conducted here a systematic pan-cancer analysis of <i>FHIT</i> status in connection with other mutations and phenotypic alterations, and we have critically discussed our findings in connection with the literature to provide an overall view of FHIT implications in cancer.
DOI: 10.6084/m9.figshare.25041927
title: Matrin-3 acts as a potential biomarker and promotes hepatocellular carcinoma progression by interacting with cell cycle-regulating genes

description: Hepatocellular carcinoma (HCC) is one of the leading causes of cancer-related mortality worldwide. The oncogenic role of Matrin-3 (MATR3), an a nuclear matrix protein, in HCC remains largely unknown. Here, we document the biological function of MATR3 in HCC based on integrated bioinformatics analysis and functional studies. According to the TCGA database, MATR3 expression was found to be positively correlated with clinicopathological characteristics in HCC. The receiver operating characteristic (ROC) curve and Kaplan-Meier (KM) curve displayed the diagnostic and prognostic potentials of MATR3 in HCC patients, respectively. Pathway enrichment analysis represented the enrichment of MATR3 in various molecular pathways, including the regulation of the cell cycle. Functional assays in HCC cell lines showed reduced proliferation of cells with stable silencing of MATR3. At the same time, the suppressive effects of MATR3 depletion on HCC development were verified by xenograft tumor experiments. Moreover, MATR3 repression also resulted in cell cycle arrest by modulating the expression of cell cycle-associated genes. In addition, the interaction of MATR3 with cell cycle-regulating factors in HCC cells was further corroborated with co-immunoprecipitation and mass spectrometry (Co-IP/MS). Furthermore, CIBERSORT and TIMER analyses showed an association between MATR3 and immune infiltration in HCC. In general, this study highlights the novel oncogenic function of MATR3 in HCC, which could comprehensively address how aberrant changes in the cell cycle promote HCC development. MATR3 might serve as a prognostic predictor and therapeutic target for HCC patients.
DOI: 10.15468/dl.9x3k56
title: Occurrence Download

description: A dataset containing 7213716 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phylloscopidae"
 ]
}

 The dataset includes 7213716 records from 1542 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0223271-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qivdjy
title: Occurrence Download

description: A dataset containing 168 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Poa lindsayi Hook.f."
 ]
}

 The dataset includes 168 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008528-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.egrvzv
title: Occurrence Download

description: A dataset containing 3358 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhinella arenarum (Hensel, 1867)"
 ]
}

 The dataset includes 3358 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024711-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bnekc7
title: Occurrence Download

description: A dataset containing 220 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Citrus cavaleriei H.Lév. ex Cavalerie"
 ]
}

 The dataset includes 220 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051504-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dtx7db
title: Occurrence Download

description: A dataset containing 16721 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Silene dioica (L.) Clairv.",
 "MediaType is Image",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 16721 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002154-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vsifcf
title: Occurrence Download

description: A dataset containing 1117 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudoeurycea bellii (Gray, 1850)"
 ]
}

 The dataset includes 1117 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008529-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7pefg8
title: Occurrence Download

description: A dataset containing 10040 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Peromyscus mexicanus (Saussure, 1860)"
 ]
}

 The dataset includes 10040 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0254825-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hs7uvm
title: Occurrence Download

description: A dataset containing 353 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Otus semitorques Temminck & Schlegel, 1844"
 ]
}

 The dataset includes 353 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051525-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3khz45
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epidendrum rhopalostele Hágsater & Dodson"
 ]
}

 The dataset includes 62 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0160976-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.abh79t
title: Occurrence Download

description: A dataset containing 51950 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ruscus aculeatus L."
 ]
}

 The dataset includes 51950 records from 182 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008529-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8cfvbs
title: Occurrence Download

description: A dataset containing 1054277 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "TaxonKey is Chordata"
 ]
}

 The dataset includes 1054277 records from 495 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0282214-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ypcb6z
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bulbophyllum uncinatum J.J.Verm. & P.O'Byrne"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0075965-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tmd2b9
title: Occurrence Download

description: A dataset containing 14750 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Betula pendula Roth",
 "DatasetKey is Florabank1 - A grid-based database on vascular plant distribution in the northern part of Belgium (Flanders and the Brussels Capital region)"
 ]
}

 The dataset includes 14750 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008529-160822134323880/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4vbuvw
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Mirafra ashi Colston, 1982"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051471-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a6hgwm
title: Occurrence Download

description: A dataset containing 3889 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diadasia rinconis Cockerell, 1897"
 ]
}

 The dataset includes 3889 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0309616-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vrskrg
title: Occurrence Download

description: A dataset containing 674 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "TaxonKey is Xylocopa aestuans (Linnaeus, 1758)"
 ]
}

 The dataset includes 674 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180141-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ry2fts
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Terpsiphone bedfordi (Ogilvie-Grant, 1907)"
 ]
}

 The dataset includes 34 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051479-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.