cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3556419
title: Appendix A. Hierarchical Bayesian model description, tables of pooling factors, and figures showing WW/BIO contrasts and coefficient of variation in the introduced vs. native range.

description: Hierarchical Bayesian model description, tables of pooling factors, and figures showing WW/BIO contrasts and coefficient of variation in the introduced vs. native range.
DOI: 10.6084/m9.figshare.3556419.v1
title: Appendix A. Hierarchical Bayesian model description, tables of pooling factors, and figures showing WW/BIO contrasts and coefficient of variation in the introduced vs. native range.

description: Hierarchical Bayesian model description, tables of pooling factors, and figures showing WW/BIO contrasts and coefficient of variation in the introduced vs. native range.
DOI: 10.6084/m9.figshare.3556416
title: Supplement 1. Studies used in the analysis plus performance data from the introduced and native ranges of 53 species.

description: File List WW_data.csv (MD5: bea9735e3287063ef68b08964f6e4d53) Description Table listing data source for each datum in the study, the species, the general type of organism (plant/animal), range (native or introduced), country (when known), the actual datum, category of metric (Size, Reproduction, Abundance), what was measured in the field, the units it was measured in, where in the manuscript to find the datum, estimated year it was introduced (or ‘NA’ if it was native and thus not introduced), the number of years between the time of introduction and the time of the study, and whether the species was intentionally or accidentally introduced.
DOI: 10.6084/m9.figshare.3556416.v1
title: Supplement 1. Studies used in the analysis plus performance data from the introduced and native ranges of 53 species.

description: File List WW_data.csv (MD5: bea9735e3287063ef68b08964f6e4d53) Description Table listing data source for each datum in the study, the species, the general type of organism (plant/animal), range (native or introduced), country (when known), the actual datum, category of metric (Size, Reproduction, Abundance), what was measured in the field, the units it was measured in, where in the manuscript to find the datum, estimated year it was introduced (or ‘NA’ if it was native and thus not introduced), the number of years between the time of introduction and the time of the study, and whether the species was intentionally or accidentally introduced.
DOI: 10.6084/m9.figshare.3556413
title: Mokken analysis of Peer Physical Examination Questionnaire

description: Data collected using the Peer Physical Examination Questionnaire with year 1 osteopathy students from Victoria University and Southern Cross University in the 2015 and 2016 cohorts.<br>
DOI: 10.6084/m9.figshare.3556413.v1
title: Mokken analysis of Peer Physical Examination Questionnaire

description: Data collected using the Peer Physical Examination Questionnaire with year 1 osteopathy students from Victoria University and Southern Cross University in the 2015 and 2016 cohorts.<br>
DOI: 10.6084/m9.figshare.3556398
title: A novel strategy combining magnetic particle hyperthermia pulses with enhanced performance binary ferrite carriers for effective <i>in vitro</i> manipulation of primary human osteogenic sarcoma cells

description: The present study examines the heating efficiency of a combination of manganese or cobalt ferrites in a binary (Co- or Mn-) ferrite nanoparticle form with magnetite, covered with citric acid to improve biocompatibility. The nanoparticle synthesis is based on the aqueous co-precipitation of proper salts, a facile, low-cost, environmentally friendly and high yield synthetic approach. By detailed structural and magnetic characterisation, the direct influence of structural and magnetic features on magnetic hyperthermia concludes to optimum heating efficiency. At a second stage, best performing magnetic nanoparticles undergo <i>in vitro</i> testing in three cell lines: one cancer cell line and two reference healthy cell lines. Both binary ferrite (MnFe<sub>2</sub>O<sub>4</sub>/Fe<sub>3</sub>O<sub>4</sub> and CoFe<sub>2</sub>O<sub>4</sub>/Fe<sub>3</sub>O<sub>4</sub>) appear to be internalised and well tolerated by the cells while a versatile hyperthermia protocol is attempted in an effort to further improve their <i>in vitro</i> performance. Within this protocol, hyperthermia sequences are split in two runs with an intermediate 48 h time interval cell incubation stage while in each run a variable field mode (single or multiple pulses) is applied. Single-pulse field mode represents a typical hyperthermia application scheme where cells undergo the thermal shock continuously. On the other hand multiple-pulses mode refers to multiple, much shorter in duration AC field changes (field ON/OFFs), at each hyperthermia run, resulting eventually in high heating rate and much more harmful cell treatment. Consequently, we propose a novel series of improved performance heat mediators based on ferrite structures which show maximum efficiency at cancer cells when combined with a versatile multiple-pulse hyperthermia module.
DOI: 10.6084/m9.figshare.3556398.v1
title: A novel strategy combining magnetic particle hyperthermia pulses with enhanced performance binary ferrite carriers for effective <i>in vitro</i> manipulation of primary human osteogenic sarcoma cells

description: The present study examines the heating efficiency of a combination of manganese or cobalt ferrites in a binary (Co- or Mn-) ferrite nanoparticle form with magnetite, covered with citric acid to improve biocompatibility. The nanoparticle synthesis is based on the aqueous co-precipitation of proper salts, a facile, low-cost, environmentally friendly and high yield synthetic approach. By detailed structural and magnetic characterisation, the direct influence of structural and magnetic features on magnetic hyperthermia concludes to optimum heating efficiency. At a second stage, best performing magnetic nanoparticles undergo <i>in vitro</i> testing in three cell lines: one cancer cell line and two reference healthy cell lines. Both binary ferrite (MnFe<sub>2</sub>O<sub>4</sub>/Fe<sub>3</sub>O<sub>4</sub> and CoFe<sub>2</sub>O<sub>4</sub>/Fe<sub>3</sub>O<sub>4</sub>) appear to be internalised and well tolerated by the cells while a versatile hyperthermia protocol is attempted in an effort to further improve their <i>in vitro</i> performance. Within this protocol, hyperthermia sequences are split in two runs with an intermediate 48 h time interval cell incubation stage while in each run a variable field mode (single or multiple pulses) is applied. Single-pulse field mode represents a typical hyperthermia application scheme where cells undergo the thermal shock continuously. On the other hand multiple-pulses mode refers to multiple, much shorter in duration AC field changes (field ON/OFFs), at each hyperthermia run, resulting eventually in high heating rate and much more harmful cell treatment. Consequently, we propose a novel series of improved performance heat mediators based on ferrite structures which show maximum efficiency at cancer cells when combined with a versatile multiple-pulse hyperthermia module.
DOI: 10.6084/m9.figshare.3556371
title: Diet manipulation.xlsx

description: Glucose, sucrose, fructose feeding and starvation experiment
DOI: 10.6084/m9.figshare.3556371.v2
title: Diet manipulation.xlsx

description: Glucose, sucrose, fructose feeding and starvation experiment
DOI: 10.6084/m9.figshare.3556371.v1
title: Diet manipulation.xlsx

description: Glucose, sucrose, fructose feeding and starvation experiment
DOI: 10.6084/m9.figshare.3556305
title: Peer Review Survey Data

description: The Wiley Peer Review Survey was undertaken to understand peer reviewer motivations and experience, with a particular focus on recognition and training needs.
DOI: 10.6084/m9.figshare.3556305.v1
title: Peer Review Survey Data

description: The Wiley Peer Review Survey was undertaken to understand peer reviewer motivations and experience, with a particular focus on recognition and training needs.
DOI: 10.6084/m9.figshare.3556302
title: Gaussian Job Archive for C60H50S12

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.3556302.v1
title: Gaussian Job Archive for C60H50S12

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.3556287.v1
title: Jmol Script for Programmatic Conversion of Crystal Structures into 3D Printable Files

description: Jmol Script for Programmatic Conversion of Crystal Structures into 3D Printable Files
DOI: 10.6084/m9.figshare.3556287.v2
title: Jmol Script for Programmatic Conversion of Crystal Structures into 3D Printable Files

description: Jmol Script for Programmatic Conversion of Crystal Structures into 3D Printable Files
DOI: 10.6084/m9.figshare.3556287.v3
title: Jmol Script for Programmatic Conversion of Crystal Structures into 3D Printable Files

description: Jmol Script for Programmatic Conversion of Crystal Structures into 3D Printable Files
DOI: 10.6084/m9.figshare.3556152
title: A hypertrigonometric family of functions expressed using ratios of the Riemann Zeta function.

description: A hypertrigonometric family of functions bounded by [-1,1] can be defined using ratios of Riemann Zeta functions. Using this approach, the Riemann Zeta critical line zeroes can be understood as finding the minimum of one particular hypertrigonometric function (zetatangent(s)), in the bounded region 0 &lt; = Re ( s ) &lt; = 1, Im(s) &gt; 2π.
DOI: 10.5281/zenodo.4012677
title: Identity-by-descent detection across 487,409 British samples reveals fine scale population structure and ultra-rare variant associations: data related to publication

description: Data related to the following publication: "Identity-by-descent detection across 487,409 British samples reveals fine scale population structure and ultra-rare variant associations"
DOI: 10.6084/m9.figshare.3556152.v2
title: A hypertrigonometric family of functions expressed using ratios of the Riemann Zeta function.

description: A hypertrigonometric family of functions bounded by [-1,1] can be defined using ratios of Riemann Zeta functions. Using this approach, the Riemann Zeta critical line zeroes can be understood as finding the minimum of one particular hypertrigonometric function (zetatangent(s)), in the bounded region 0 &lt; = Re ( s ) &lt; = 1, Im(s) &gt; 2π.
DOI: 10.5281/zenodo.4012676
title: Identity-by-descent detection across 487,409 British samples reveals fine scale population structure and ultra-rare variant associations: data related to publication

description: Data related to the following publication: "Identity-by-descent detection across 487,409 British samples reveals fine scale population structure and ultra-rare variant associations"
DOI: 10.6084/m9.figshare.3556152.v3
title: A hypertrigonometric family of functions expressed using ratios of the Riemann Zeta function.

description: A hypertrigonometric family of functions bounded by [-1,1] can be defined using ratios of Riemann Zeta functions. Using this approach, the Riemann Zeta critical line zeroes can be understood as finding the minimum of one particular hypertrigonometric function (zetatangent(s)), in the bounded region 0 &lt; = Re ( s ) &lt; = 1, Im(s) &gt; 2π.
DOI: 10.6084/m9.figshare.3556152.v5
title: A hypertrigonometric family of functions expressed using ratios of the Riemann Zeta function.

description: A hypertrigonometric family of functions bounded by [-1,1] can be defined using ratios of Riemann Zeta functions. Using this approach, the Riemann Zeta critical line zeroes can be understood as finding the minimum of one particular hypertrigonometric function (zetatangent(s)), in the bounded region 0 &lt; = Re ( s ) &lt; = 1, Im(s) &gt; 2π.
DOI: 10.6084/m9.figshare.3556152.v4
title: A hypertrigonometric family of functions expressed using ratios of the Riemann Zeta function.

description: A hypertrigonometric family of functions bounded by [-1,1] can be defined using ratios of Riemann Zeta functions. Using this approach, the Riemann Zeta critical line zeroes can be understood as finding the minimum of one particular hypertrigonometric function (zetatangent(s)), in the bounded region 0 &lt; = Re ( s ) &lt; = 1, Im(s) &gt; 2π.
DOI: 10.6084/m9.figshare.3555810
title: Figmeta: Community driven metadata for figshare

description: First Draft:<br>One of the challenges for the progression of research metadata standards is that technology often gets in the way. Bound by the pressure not to be weighed down by technical debt,and the desire to appeal to as broader an audience as possible, the adoption of metadata standards within technology platforms is conservative.Ideally, this is not how things should be.The adoption of standards and practices should be community led, with technology functioning as the enabler. Figmeta showcases one attempt to move closer towards this goal by semantically enabling figshare as a basis for rapid ontology development and adoption.
DOI: 10.6084/m9.figshare.3555807
title: Results.sav

description: These are the raw data used in our study.
DOI: 10.6084/m9.figshare.3555774
title: Supplementary Material for: Review of the Tuberous Sclerosis Renal Guidelines from the 2012 Consensus Conference: Current Data and Future Study

description: Renal-related disease is the most common cause of tuberous sclerosis complex (TSC)-related death in adults, and renal angiomyolipomas can lead to complications that include chronic kidney disease (CKD) and hemorrhage. International TSC guidelines recommend mammalian target of rapamycin (mTOR) inhibitors as first-line therapy for management of asymptomatic, growing angiomyolipomas &gt;3 cm in diameter. This review discusses data regarding patient outcomes that were used to develop current guidelines for embolization of renal angiomyolipomas and presents recent data on 2 available mTOR inhibitors - sirolimus and everolimus - in the treatment of angiomyolipoma. TSC-associated renal angiomyolipomas can recur after embolization. Both sirolimus and everolimus have shown effectiveness in reduction of angiomyolipoma volume, with an acceptable safety profile that includes preservation of renal function with long-term therapy. The authors propose a hypothesis for mTORC1 haploinsufficiency as an additional mechanism for CKD and propose that preventive therapy with mTOR inhibitors might have a role in reducing the number of angiomyolipoma-related deaths. Because mTOR inhibitors target the underlying pathophysiology of TSC, patients might benefit from treatment of multiple manifestations with one systemic therapy. Based on recent evidence, new guidelines should be considered that support the earlier initiation of mTOR inhibitor therapy for the management of renal angiomyolipomas to prevent future serious complications, rather than try to rescue patients after the complications have occurred.
DOI: 10.6084/m9.figshare.3555765
title: Data Paper. Data Paper

description: File List bathymetry_30s.7z (MD5: dd855211bbcdee7d6862414da23d6da2) biogeo01_07_30s.7z (MD5: 396525db0abd9de2ede3d8fdeb15e8ee) biogeo08_17_30s.7z (MD5: 96c2417eed84e85f9896536b934c53e1) Monthly_Variables_30s.7z (MD5: 89016a8d17e8d8a1dddef0a121a83f5d) Additional high resolution raster files: Sea_Ice_30s.7z (MD5: 547d355294c530f63b9b0a73dedd2f3a) Low resolution MARSPEC data files: MARSPEC_2o5m.7z (MD5: 923c97d185adb0c72f158a84e2981391) MARSPEC_5m.7z (MD5: 95f7c3739c4f2889c2eff18afeffa489) MARSPEC_10m.7z (MD5: d91f3127f46f7004d116f14328bf4b71) Description Ecological niche models are widely used in terrestrial studies to address critical ecological and evolutionary questions related to past and future climate change, local adaptation and speciation, the discovery of rare endemics, and biological invasions. However the application of niche models to similar questions in marine ecosystems has lagged behind, in part due to the lack of a centralized high-resolution spatial data set representing both benthic and pelagic marine environments. Here we describe the creation of MARSPEC, a high-resolution GIS database of ocean climate layers intended for marine ecological niche modeling and other applications in marine spatial ecology. MARSPEC combines information related to topographic complexity of the seafloor with bioclimatic measures of sea surface temperature and salinity for the world ocean. We derived seven geophysical variables from a high-resolution raster grid representing depth of the seafloor (bathymetry) to characterize six facets of topographic complexity (east-west and north-south components of aspect, slope, concavity of the seafloor, and plan and profile curvature) and distance from shore. We further derived 10 bioclimatic variables describing the annual mean, range, variance and extreme values for temperature and salinity from long-term monthly climatological means obtained from remotely sensed and in situ oceanographic observations. All variables were clipped to a common land mask, interpolated to a nominal 1-km (30 arc-second) grid, and converted to an ESRI raster grid file format compatible with popular GIS programs. MARSPEC is a 10-fold improvement in spatial resolution over the next-best data set (Bio-ORACLE) and is the only high-resolution global marine data set to combine variables from the benthic and pelagic environments into a single database. Additionally, we provide the monthly climatological layers used to derive the bioclimatic variables, allowing users to calculate equivalent MARSPEC variables from anomaly data for past and future climate scenarios. A detailed description of GIS processing steps required to calculate the MARSPEC variables can be found in the metadata. <i>Key words: climate change; ecological niche modeling; GIS; marine spatial ecology; ocean climate; salinity; sea surface temperature; species distribution modeling.</i>
DOI: 10.6084/m9.figshare.3555762
title: Data Paper. Data Paper

description: File List Daily_precipitation_and_stream_discharge.csv (MD5: a7ac0051e0c363e68412b6f37549714b) Stream_nutrient_data.csv (MD5: c208116a663b64b9e05cdc7f93280ecf) Description Concentrations of nutrients and sediments in streams reflect land use and climate patterns in the watersheds they drain and also have implications for downstream ecosystems. Here we present 15 years of high-resolution data on the concentrations of nutrients (ammonium, nitrate, and soluble reactive phosphorus) and suspended sediments in three streams that drain watersheds in Ohio, USA, dominated by row crop agriculture (mostly maize and soy). In addition, we present daily precipitation and stream discharge data over this 15-year period. Agricultural practices in these watersheds have changed over this period, including a pronounced increase in conservation tillage, a reduction in fertilizers, a reduction in the number of hogs, and improved manure management. The data set consists of &gt;42 000 nutrient and sediment concentrations (3198–3898 samples from each of three streams for four nutrient and sediment constituents). The data set is unique in terms of its combination of length and resolution (sampling frequency 6–8 hours during storms) as well as its utility in assessing how changes in agricultural practices affect the concentrations and export rates of nutrients and sediments. Data presented here have been used in several papers quantifying nutrient export from streams, nutrient loading to a downstream reservoir (Acton Lake), and how nutrient inputs modulate ecosystem function and food web dynamics in Acton Lake. <i>agriculture; ammonium; discharge; nitrate; nitrogen; phosphorus; sediments; streams; water quality; watershed</i>.
DOI: 10.6084/m9.figshare.3555762.v1
title: Data Paper. Data Paper

description: File List Daily_precipitation_and_stream_discharge.csv (MD5: a7ac0051e0c363e68412b6f37549714b) Stream_nutrient_data.csv (MD5: c208116a663b64b9e05cdc7f93280ecf) Description Concentrations of nutrients and sediments in streams reflect land use and climate patterns in the watersheds they drain and also have implications for downstream ecosystems. Here we present 15 years of high-resolution data on the concentrations of nutrients (ammonium, nitrate, and soluble reactive phosphorus) and suspended sediments in three streams that drain watersheds in Ohio, USA, dominated by row crop agriculture (mostly maize and soy). In addition, we present daily precipitation and stream discharge data over this 15-year period. Agricultural practices in these watersheds have changed over this period, including a pronounced increase in conservation tillage, a reduction in fertilizers, a reduction in the number of hogs, and improved manure management. The data set consists of &gt;42 000 nutrient and sediment concentrations (3198–3898 samples from each of three streams for four nutrient and sediment constituents). The data set is unique in terms of its combination of length and resolution (sampling frequency 6–8 hours during storms) as well as its utility in assessing how changes in agricultural practices affect the concentrations and export rates of nutrients and sediments. Data presented here have been used in several papers quantifying nutrient export from streams, nutrient loading to a downstream reservoir (Acton Lake), and how nutrient inputs modulate ecosystem function and food web dynamics in Acton Lake. <i>agriculture; ammonium; discharge; nitrate; nitrogen; phosphorus; sediments; streams; water quality; watershed</i>.
DOI: 10.6084/m9.figshare.3555759
title: Data Paper. Data Paper

description: File List Three data sets and associated metadata are presented in the following files. <b>Small mammals:</b> <i> Data files --</i>Fray_Jorge_Small_Mammals_198903-200512.txt <i>Metadata --</i>Fray_Jorge_Small_Mammal_Metadata.php <b>Vegetation:</b> <i> Data files --</i> Fray_Jorge_Annuals_1989-2005.txt Fray_Jorge_Perennials_1989-2005.txt Fray_Jorge_Seeds_1989-2002.txt Fray_Jorge_Seeds_2003-2005 I.txt Fray_Jorge_Seeds_2003-2005 II.txt <i>Metadata --</i>Fray_Jorge_Plant_Metadata.php <b>Precipitation:</b> <i> Data files --</i> Fray_Jorge_Precipitation_1989-2005.csv <i>Metadata --</i> Fray_Jorge_Precipitation_Metadata.php Description The data set covers a 16-year period (1989–2005) of monthly small-mammal surveys and associated habitat and environmental data. Small mammals are trapped every month on all experimental plots, and both ephemeral and perennial plant cover and soil seed bank composition are measured at regular intervals. Rainfall is recorded and compiled annually (through 1998) or monthly; information on captured small mammals and on all vegetative and rainfall data are contained in associated files. These data have been applied to diverse population- and community-level analyses and remain useful for investigations of population dynamics, species interactions, and the relative influence of biotic and abiotic factors. Sampling is ongoing and data will be added over time. <i>Key words: biotic vs. abiotic interactions; climate; competition; ENSO; ephemeral plant cover; LTREB data; predation; semiarid ecosystem; shrub cover; small mammals.</i>
DOI: 10.6084/m9.figshare.3555753
title: Appendix A. Relationship between leaf damage and total seed predator abundance.

description: Relationship between leaf damage and total seed predator abundance.
DOI: 10.6084/m9.figshare.3555753.v1
title: Appendix A. Relationship between leaf damage and total seed predator abundance.

description: Relationship between leaf damage and total seed predator abundance.
DOI: 10.6084/m9.figshare.3555750
title: Appendix B. Relationship between leaf damage and seed predation by Mompha stellella, Schinia florida, and Mompha brevivittella.

description: Relationship between leaf damage and seed predation by Mompha stellella, Schinia florida, and Mompha brevivittella.
DOI: 10.6084/m9.figshare.3555750.v1
title: Appendix B. Relationship between leaf damage and seed predation by Mompha stellella, Schinia florida, and Mompha brevivittella.

description: Relationship between leaf damage and seed predation by Mompha stellella, Schinia florida, and Mompha brevivittella.