cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3551865
title: Appendix C. A table presenting methyl jasmonate-induced volatile organic-compound emission in Solanum peruvianum.

description: A table presenting methyl jasmonate-induced volatile organic-compound emission in Solanum peruvianum.
DOI: 10.6084/m9.figshare.3551865.v1
title: Appendix C. A table presenting methyl jasmonate-induced volatile organic-compound emission in Solanum peruvianum.

description: A table presenting methyl jasmonate-induced volatile organic-compound emission in Solanum peruvianum.
DOI: 10.6084/m9.figshare.3551862
title: Appendix A. Bayesian modeling of forest states and probability of invasion by giant African landsnails (GALS).

description: Bayesian modeling of forest states and probability of invasion by giant African landsnails (GALS).
DOI: 10.6084/m9.figshare.3551862.v1
title: Appendix A. Bayesian modeling of forest states and probability of invasion by giant African landsnails (GALS).

description: Bayesian modeling of forest states and probability of invasion by giant African landsnails (GALS).
DOI: 10.6084/m9.figshare.3551859
title: Appendix B. Description and rationale for assignment of waypoints to forest states in the island-wide survey.

description: Description and rationale for assignment of waypoints to forest states in the island-wide survey.
DOI: 10.6084/m9.figshare.3551856
title: Appendix C. Bayesian modeling of survival of tethered GALS.

description: Bayesian modeling of survival of tethered GALS.
DOI: 10.6084/m9.figshare.3551859.v1
title: Appendix B. Description and rationale for assignment of waypoints to forest states in the island-wide survey.

description: Description and rationale for assignment of waypoints to forest states in the island-wide survey.
DOI: 10.6084/m9.figshare.3551856.v1
title: Appendix C. Bayesian modeling of survival of tethered GALS.

description: Bayesian modeling of survival of tethered GALS.
DOI: 10.6084/m9.figshare.3551853
title: Appendix D. GALS density and predation pressure in and out of ant supercolonies.

description: GALS density and predation pressure in and out of ant supercolonies.
DOI: 10.6084/m9.figshare.3551853.v1
title: Appendix D. GALS density and predation pressure in and out of ant supercolonies.

description: GALS density and predation pressure in and out of ant supercolonies.
DOI: 10.6084/m9.figshare.3551850
title: Appendix E. A table presenting parameter estimates for model A.1 (in Appendix A) for comparisons of sites first invaded by GALS in the periods 2001–2003, 2003–2005, and 2005–2007.

description: A table presenting parameter estimates for model A.1 (in Appendix A) for comparisons of sites first invaded by GALS in the periods 2001–2003, 2003–2005, and 2005–2007.
DOI: 10.6084/m9.figshare.3551847
title: Appendix F. A table presenting parameter estimates for model C.1 (in Appendix C) for comparisons of survival time (in days) of tethered GALS in three forest states (yellow crazy ant [YCA] supercolonies, intact forest, ghosted forest) over 180 days.

description: A table presenting parameter estimates for model C.1 (in Appendix C) for comparisons of survival time (in days) of tethered GALS in three forest states (yellow crazy ant [YCA] supercolonies, intact forest, ghosted forest) over 180 days.
DOI: 10.6084/m9.figshare.3551850.v1
title: Appendix E. A table presenting parameter estimates for model A.1 (in Appendix A) for comparisons of sites first invaded by GALS in the periods 2001–2003, 2003–2005, and 2005–2007.

description: A table presenting parameter estimates for model A.1 (in Appendix A) for comparisons of sites first invaded by GALS in the periods 2001–2003, 2003–2005, and 2005–2007.
DOI: 10.6084/m9.figshare.3551847.v1
title: Appendix F. A table presenting parameter estimates for model C.1 (in Appendix C) for comparisons of survival time (in days) of tethered GALS in three forest states (yellow crazy ant [YCA] supercolonies, intact forest, ghosted forest) over 180 days.

description: A table presenting parameter estimates for model C.1 (in Appendix C) for comparisons of survival time (in days) of tethered GALS in three forest states (yellow crazy ant [YCA] supercolonies, intact forest, ghosted forest) over 180 days.
DOI: 10.6084/m9.figshare.3551844
title: Appendix G. A table presenting parameter estimates for model D.1 (in Appendix D) for comparisons of GALS density (live individuals and total shells), the proportion of broken GALS shells, YCA activity, and red land crab (RLC) burrow density.

description: A table presenting parameter estimates for model D.1 (in Appendix D) for comparisons of GALS density (live individuals and total shells), the proportion of broken GALS shells, YCA activity, and red land crab (RLC) burrow density.
DOI: 10.6084/m9.figshare.3551844.v1
title: Appendix G. A table presenting parameter estimates for model D.1 (in Appendix D) for comparisons of GALS density (live individuals and total shells), the proportion of broken GALS shells, YCA activity, and red land crab (RLC) burrow density.

description: A table presenting parameter estimates for model D.1 (in Appendix D) for comparisons of GALS density (live individuals and total shells), the proportion of broken GALS shells, YCA activity, and red land crab (RLC) burrow density.
DOI: 10.6084/m9.figshare.3551841
title: Appendix A. Plant species used in laboratory feeding trials and field seed addition experiments.

description: Plant species used in laboratory feeding trials and field seed addition experiments.
DOI: 10.6084/m9.figshare.3551841.v1
title: Appendix A. Plant species used in laboratory feeding trials and field seed addition experiments.

description: Plant species used in laboratory feeding trials and field seed addition experiments.
DOI: 10.6084/m9.figshare.3551838
title: Appendix A. Details of sampling protocols, derivation, and statistical comparison of the population size estimators, details of the exact tests used for hypothesis testing, and additional tables and figures referred to in the main text.

description: Details of sampling protocols, derivation, and statistical comparison of the population size estimators, details of the exact tests used for hypothesis testing, and additional tables and figures referred to in the main text.
DOI: 10.6084/m9.figshare.3551838.v1
title: Appendix A. Details of sampling protocols, derivation, and statistical comparison of the population size estimators, details of the exact tests used for hypothesis testing, and additional tables and figures referred to in the main text.

description: Details of sampling protocols, derivation, and statistical comparison of the population size estimators, details of the exact tests used for hypothesis testing, and additional tables and figures referred to in the main text.
DOI: 10.6084/m9.figshare.3551835
title: Appendix B. A series of maps showing the expansion of the collared lizard (Crotaphytus collaris collaris) populations from the three introduced glade populations to additional glades on Stegall, Mule, and Thorny Mountains, Missouri, USA.

description: A series of maps showing the expansion of the collared lizard (Crotaphytus collaris collaris) populations from the three introduced glade populations to additional glades on Stegall, Mule, and Thorny Mountains, Missouri, USA.
DOI: 10.6084/m9.figshare.3551835.v1
title: Appendix B. A series of maps showing the expansion of the collared lizard (Crotaphytus collaris collaris) populations from the three introduced glade populations to additional glades on Stegall, Mule, and Thorny Mountains, Missouri, USA.

description: A series of maps showing the expansion of the collared lizard (Crotaphytus collaris collaris) populations from the three introduced glade populations to additional glades on Stegall, Mule, and Thorny Mountains, Missouri, USA.
DOI: 10.6084/m9.figshare.3551832
title: Supplement 1. The estimated population sizes for each glade for every year of occupation on Stegall, Mule, and Thorny Mountains.

description: File List Individual_Glade_Sizes.txt – a tab delimited file containing the estimated population sizesDescription A file containing the estimated population sizes for each glade for every year of occupation on Stegall, Mule, and Thorny Mountains. In addition, the method of estimation as described in Appendix A is indicated, along with the observed number of lizards, the standard deviation of the estimate, and the estimated sample coverage when relevant. Checksum value for download verification is: b8e4a280baa52f5bcbcd5669e156d770
DOI: 10.6084/m9.figshare.3551832.v1
title: Supplement 1. The estimated population sizes for each glade for every year of occupation on Stegall, Mule, and Thorny Mountains.

description: File List Individual_Glade_Sizes.txt – a tab delimited file containing the estimated population sizesDescription A file containing the estimated population sizes for each glade for every year of occupation on Stegall, Mule, and Thorny Mountains. In addition, the method of estimation as described in Appendix A is indicated, along with the observed number of lizards, the standard deviation of the estimate, and the estimated sample coverage when relevant. Checksum value for download verification is: b8e4a280baa52f5bcbcd5669e156d770
DOI: 10.6084/m9.figshare.3551829
title: Appendix A. A map with the locations and summary information of the four sites.

description: A map with the locations and summary information of the four sites.
DOI: 10.6084/m9.figshare.3551829.v1
title: Appendix A. A map with the locations and summary information of the four sites.

description: A map with the locations and summary information of the four sites.
DOI: 10.6084/m9.figshare.3551826
title: Appendix B. A table with abundance, size, dispersal, and growth-form data, along with summary spatial statistics for all the species included in the analyses.

description: A table with abundance, size, dispersal, and growth-form data, along with summary spatial statistics for all the species included in the analyses.
DOI: 10.6084/m9.figshare.3551823
title: Appendix C. A figure showing the effect of different size-class limits on changes in spatial aggregation between small and large trees.

description: A figure showing the effect of different size-class limits on changes in spatial aggregation between small and large trees.
DOI: 10.6084/m9.figshare.3551820
title: Appendix D. Plots of the L functions summarizing changes in spatial aggregation between small and large trees for all species analyzed in the study.

description: Plots of the L functions summarizing changes in spatial aggregation between small and large trees for all species analyzed in the study.
DOI: 10.6084/m9.figshare.3551823.v1
title: Appendix C. A figure showing the effect of different size-class limits on changes in spatial aggregation between small and large trees.

description: A figure showing the effect of different size-class limits on changes in spatial aggregation between small and large trees.
DOI: 10.6084/m9.figshare.3551820.v1
title: Appendix D. Plots of the L functions summarizing changes in spatial aggregation between small and large trees for all species analyzed in the study.

description: Plots of the L functions summarizing changes in spatial aggregation between small and large trees for all species analyzed in the study.
DOI: 10.6084/m9.figshare.3551817
title: Appendix E. Summary statistics from analyses examining the effects of species traits on the change in clustering between juveniles and adults.

description: Summary statistics from analyses examining the effects of species traits on the change in clustering between juveniles and adults.
DOI: 10.6084/m9.figshare.3551817.v1
title: Appendix E. Summary statistics from analyses examining the effects of species traits on the change in clustering between juveniles and adults.

description: Summary statistics from analyses examining the effects of species traits on the change in clustering between juveniles and adults.
DOI: 10.6084/m9.figshare.3551814
title: Appendix A. Proof that E[log(s)] is smaller than log(E[s]).

description: Proof that E[log(s)] is smaller than log(E[s]).
DOI: 10.6084/m9.figshare.3551814.v1
title: Appendix A. Proof that E[log(s)] is smaller than log(E[s]).

description: Proof that E[log(s)] is smaller than log(E[s]).
DOI: 10.6084/m9.figshare.3551811
title: Supplement 1. R code to fit the log-binomial model and to perform the jackknife and bootstraps.

description: File List DistanceDecay.R Description The R code required to reproduce the analysis presented in the application. The code includes functions to perform the bootstrap and jackknife.
DOI: 10.6084/m9.figshare.3551808
title: Supplement 2. The depth and species-assemblage data used in the application.

description: File List Lat33.csv Lat33checksum.csv Description Lat33.csv The depth and species-abundance data used in the application, from 68 demersal trawls at approximate latitude 33N. Column 1 contains the depth. Columns 2–118 contain the catch weight (kg) of each of 117 species. The species id numbers are not sequential, because some species were not caught at latitude 33N, and are not included. There are no missing values in this data set. Lat33checksum.csv The checksum values for the 118 columns in Lat33.csv.
DOI: 10.6084/m9.figshare.3551808.v1
title: Supplement 2. The depth and species-assemblage data used in the application.

description: File List Lat33.csv Lat33checksum.csv Description Lat33.csv The depth and species-abundance data used in the application, from 68 demersal trawls at approximate latitude 33N. Column 1 contains the depth. Columns 2–118 contain the catch weight (kg) of each of 117 species. The species id numbers are not sequential, because some species were not caught at latitude 33N, and are not included. There are no missing values in this data set. Lat33checksum.csv The checksum values for the 118 columns in Lat33.csv.
DOI: 10.6084/m9.figshare.3551805
title: Appendix A. Additional details about study sites, methods, and results.

description: Additional details about study sites, methods, and results.
DOI: 10.6084/m9.figshare.3551805.v1
title: Appendix A. Additional details about study sites, methods, and results.

description: Additional details about study sites, methods, and results.
DOI: 10.6084/m9.figshare.3551802
title: Data Paper. Data Paper

description: File List body_composition.txt -- comma-delimited ASCII text file, 239 records not including header row. size_to_mass_biometric_equations.txt -- comma-delimited ASCII text file, 199 records not including header row. mass_to_mass_biometric_equations.txt -- comma-delimited ASCII text file, 66 records not including header row. Description Many marine organisms have gelatinous bodies, but the trait is most common in the medusae (phylum Cnidaria), ctenophores (phylum Ctenophora), and the pelagic tunicates (phylum Chordata, class Thaliacea). Although there are taxonomic and trophic differences between the thaliaceans and the other two closely related phyla, the collective term "jellyfish" has been used within the framework of this article. Because of the apparent increase in bloom events, jellyfish are receiving greater attention from the wider marine science community. Questions being posed include: (1) what is the role of jellyfish in pelagic food webs in a changing environment, and (2) what is the role of jellyfish in large-scale biogeochemical processes such as the biological carbon pump? In order to answer such questions, fundamental data on body composition and biomass are required. The purpose of this data set was to compile proximate and elemental body composition and length–mass and mass–mass regressions for jellyfish (i.e., medusae, siphonophores, ctenophores, salps, doliolids, and pyrosomes) to serve as a baseline data set informing studies on biogeochemical cycling, food web dynamics, and ecosystem modeling, and physiology. Using mainly published data from 1932 to 2010, we have assembled three data sets: (1) body composition (wet, dry, and ash-free dry mass, C, N, P as a percentage of wet and dry mass, and C:N), (2) length–mass biometric equations, and (3) mass–mass biometric equations. The data sets represent a total of 102 species from six classes (20 Thaliacea, 2 Cubozoa, 33 Hydrozoa, 26 Scyphozoa, 17 Tentaculata, 4 Nuda) in three phyla. Where it exists, we have included supplementary data on location, salinity, whole animal or tissue type, measured size range, and where appropriate, the regression type with values of sample size, correlation coefficients (<i>r</i>, <i>r</i><sup>2</sup>), and level of significance for the relationship. In addition to the raw unpublished data, we have provided summary tables of mean (± SD) body composition for the main taxonomic groups. <i>Key words: biometric relationships; carbon; ctenophores; dry mass; Medusae; nitrogen; organic mass; proximate composition; salps</i>.
DOI: 10.6084/m9.figshare.3551799
title: Data Paper. Data Paper

description: File List shapefiles.zip -- Shapefiles compressed together in a zipped dirctory. 33,505,926 bytes readme.txt -- 3 January 2012 explanation for file corrections <br> <br> All .csv files are ASCII text, comma separated:<br> allrecords_density.csv - 125,201 records, 9,414,808 bytes<br> allrecords_cover.csv - 81,365 records, 7,606,877 bytes<br> quad_info.csv - 44 records, 656 bytes.<br> quad_inventory.csv - 14 records, 2,086 bytes<br> species_list.csv - 155 records, 5,128 bytes<br> daily_climate_data.csv - 5114 records, 128,441 bytes<br> annuals_counts_v3.csv - 2,536 records, 68,899 bytes<br> species_name_changes.csv - Originally assigned plant names were corrected for synonyms based on the USDA Plants Database (http://plants.usda.gov/). Name changes are recorded in this file. 86 records, 3,387 bytes<br> DescriptionThis historical data set consists of 44 permanent 1-m<sup>2</sup> quadrats located on northern mixed prairie in Miles City, Montana, USA. Individual plants in these quadrats were identified and mapped annually from 1932 through 1945. Quadrats were located in six pastures assigned to cattle grazing treatments with light, moderate, and heavy stocking rates of 1.24, 0.92, and 0.76 ha/ animal-unit-month (two pastures in each). These data provide unique opportunities to test the interactive effects of grazing and climate variables on demographic rates, plant–plant interactions, and population and community dynamics. We provide the following data and data formats: (1) the digitized maps in shapefile format; (2) a tabular version of the entire data set (a table that replaces the full spatial data with one (<i>x</i>,<i>y</i>) coordinate for each individual perennial plant record); (3) grazing treatment information; (4) an inventory of the years each quadrat was sampled; (5) a species list, containing information on plant growth forms and shapefile geometry type (e.g., points or polygons); (6) a record of changes in species names; (7) daily precipitation and temperature records; and (8) counts of annual plants in the quadrats (annuals were counted, not mapped, by the original mappers).<br> <br> <i>Key words: climate; demography; Geographic Information Systems (GIS); Montana; northern mixed prairie; plant community; plant population; species interactions</i>
DOI: 10.6084/m9.figshare.3551802.v1
title: Data Paper. Data Paper

description: File List body_composition.txt -- comma-delimited ASCII text file, 239 records not including header row. size_to_mass_biometric_equations.txt -- comma-delimited ASCII text file, 199 records not including header row. mass_to_mass_biometric_equations.txt -- comma-delimited ASCII text file, 66 records not including header row. Description Many marine organisms have gelatinous bodies, but the trait is most common in the medusae (phylum Cnidaria), ctenophores (phylum Ctenophora), and the pelagic tunicates (phylum Chordata, class Thaliacea). Although there are taxonomic and trophic differences between the thaliaceans and the other two closely related phyla, the collective term "jellyfish" has been used within the framework of this article. Because of the apparent increase in bloom events, jellyfish are receiving greater attention from the wider marine science community. Questions being posed include: (1) what is the role of jellyfish in pelagic food webs in a changing environment, and (2) what is the role of jellyfish in large-scale biogeochemical processes such as the biological carbon pump? In order to answer such questions, fundamental data on body composition and biomass are required. The purpose of this data set was to compile proximate and elemental body composition and length–mass and mass–mass regressions for jellyfish (i.e., medusae, siphonophores, ctenophores, salps, doliolids, and pyrosomes) to serve as a baseline data set informing studies on biogeochemical cycling, food web dynamics, and ecosystem modeling, and physiology. Using mainly published data from 1932 to 2010, we have assembled three data sets: (1) body composition (wet, dry, and ash-free dry mass, C, N, P as a percentage of wet and dry mass, and C:N), (2) length–mass biometric equations, and (3) mass–mass biometric equations. The data sets represent a total of 102 species from six classes (20 Thaliacea, 2 Cubozoa, 33 Hydrozoa, 26 Scyphozoa, 17 Tentaculata, 4 Nuda) in three phyla. Where it exists, we have included supplementary data on location, salinity, whole animal or tissue type, measured size range, and where appropriate, the regression type with values of sample size, correlation coefficients (<i>r</i>, <i>r</i><sup>2</sup>), and level of significance for the relationship. In addition to the raw unpublished data, we have provided summary tables of mean (± SD) body composition for the main taxonomic groups. <i>Key words: biometric relationships; carbon; ctenophores; dry mass; Medusae; nitrogen; organic mass; proximate composition; salps</i>.
DOI: 10.6084/m9.figshare.3551799.v1
title: Data Paper. Data Paper

description: File List shapefiles.zip -- Shapefiles compressed together in a zipped dirctory. 33,505,926 bytes readme.txt -- 3 January 2012 explanation for file corrections <br> <br> All .csv files are ASCII text, comma separated:<br> allrecords_density.csv - 125,201 records, 9,414,808 bytes<br> allrecords_cover.csv - 81,365 records, 7,606,877 bytes<br> quad_info.csv - 44 records, 656 bytes.<br> quad_inventory.csv - 14 records, 2,086 bytes<br> species_list.csv - 155 records, 5,128 bytes<br> daily_climate_data.csv - 5114 records, 128,441 bytes<br> annuals_counts_v2.csv - 2,536 records, 79,051 bytes<br> species_name_changes.csv - Originally assigned plant names were corrected for synonyms based on the USDA Plants Database (http://plants.usda.gov/). Name changes are recorded in this file. 86 records, 3,387 bytes<br> DescriptionThis historical data set consists of 44 permanent 1-m<sup>2</sup> quadrats located on northern mixed prairie in Miles City, Montana, USA. Individual plants in these quadrats were identified and mapped annually from 1932 through 1945. Quadrats were located in six pastures assigned to cattle grazing treatments with light, moderate, and heavy stocking rates of 1.24, 0.92, and 0.76 ha/ animal-unit-month (two pastures in each). These data provide unique opportunities to test the interactive effects of grazing and climate variables on demographic rates, plant–plant interactions, and population and community dynamics. We provide the following data and data formats: (1) the digitized maps in shapefile format; (2) a tabular version of the entire data set (a table that replaces the full spatial data with one (<i>x</i>,<i>y</i>) coordinate for each individual perennial plant record); (3) grazing treatment information; (4) an inventory of the years each quadrat was sampled; (5) a species list, containing information on plant growth forms and shapefile geometry type (e.g., points or polygons); (6) a record of changes in species names; (7) daily precipitation and temperature records; and (8) counts of annual plants in the quadrats (annuals were counted, not mapped, by the original mappers).<br> <br> <i>Key words: climate; demography; Geographic Information Systems (GIS); Montana; northern mixed prairie; plant community; plant population; species interactions</i>