cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26847253.v1
title: Association of SNP-SNP interactions of surfactant protein genes with severity of respiratory syncytial virus infection in children

description: <b>Subjects</b>Briefly, children (ages 7 days to 3 years) with RSV infection diagnosed either direct fluorescent assay or viral culture of nasopharyngeal swabs were prospectively enrolled (n=416) at two children’s hospitals; Penn State Health Children’s Hospital and the University of Virginia Children’s Hospital. Blood samples were collected over three years in the RSV season. However, we excluded eleven subjects from analysis due to deterioration of the sample integrity, leaving the final sample size of 405 subjects. Key demographic and clinical data were extracted from the subject’s medical records. We defined RSV severity based on the need of 1) mechanical ventilation and/or 2) admission to the intensive care unit. Those children who were admitted to general pediatric ward served as controls. The study was approved by Institutional Review Boards of the Pennsylvania State University College of Medicine and the University of Virginia. Informed consent was obtained from either parents or guardian.<b>DNA isolation and selection of genetic variants</b>The DNA was extracted using the QIAamp Blood kit (Qiagen, CA USA) following the manufacturer’s instructions and genotypes for 16 SNPs of <i>SFTPA1,</i> <i>SFTPA2</i>, <i>SFTPB</i>, <i>SFTPC,</i> and <i>SFTPD </i>based on their associations with various acute and chronic pulmonary diseases. These include five from <i>SFTPA1</i>, rs1059047, rs1136450, rs1136451, rs1059057, and rs4253527; four SNPs from <i>SFTPA2</i>, rs1059046, rs17886395, rs1965707, and 1965708; three SNPs from <i>SFTPB</i>, rs2077079, rs3024798, and rs1130866; two SNPs from <i>SFTPC</i>, rs4715 and rs1124; and two SNPs from <i>SFTPD</i>, rs721917 and rs2243639 (Supplemental Table S1). The majority of these SNPs are in coding regions of <i>SFTP</i> genes. Genotypes for SP-A1 (6A, 6A<sup>m</sup>, m=0-13) and SP-A2 (1A, 1A<sup>n</sup>, n=0-15) were assigned in a blinded fashion as described previously.<b>Genotype Analysis</b>Genotyping was conducted using two methods. Half of the samples were genotyped using polymerase chain reaction-restriction fragment length polymorphism technique and the remaining samples were genotyped using a multiplexed polymerase chain reaction workflow of Ampliseq utilizing custom designed panels (Illumina, San Diego, CA). All samples were de-identified and assigned a laboratory number on arrival from study sites to minimize potential bias in the analysis.
DOI: 10.5281/zenodo.10813104
title: Data for "Segregation-induced flow transitions in rock-ice avalanches"

description: This is raw data and the codes needed to replicate all the graphs in the manuscript entitled "Segregation-induced flow transitions in rock-ice avalanche".
DOI: 10.5281/zenodo.10813105
title: Data for "Segregation-induced flow transitions in rock-ice avalanches"

description: This is raw data and the codes needed to replicate all the graphs in the manuscript entitled "Segregation-induced flow transitions in rock-ice avalanche".
DOI: 10.15468/dl.8cvfmu
title: Occurrence Download

description: A dataset containing 3698675 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is USA",
 "Geometry POLYGON((-126.9705 21.07763,-62.2514 21.07763,-62.2514 51.27399,-126.9705 51.27399,-126.9705 21.07763))",
 "OccurrenceStatus is Present",
 "TaxonKey is Lepidoptera",
 "Year 1950-2020"
 ]
}

 The dataset includes 3698675 records from 202 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107846-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13500844
title: IMPROVEMENT OF ACCOUNTING OF FINANCIAL OBLIGATIONS BASED ON INTERNATIONAL STANDARDS
DOI: 10.5281/zenodo.13500846
title: IMPROVEMENT OF ACCOUNTING OF FINANCIAL OBLIGATIONS BASED ON INTERNATIONAL STANDARDS
DOI: 10.15468/dl.7apu99
title: Occurrence Download

description: A dataset containing 4994 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cardamine occulta Hornem.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4994 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107856-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13325371
title: MR-Eye atlas: a large-scale atlas of the eye based on T1-weighted MR imaging

description: MR-Eye atlas is a novel digital atlas contructed from MR images (T1-weighted MRI acquired at 1.5T ) of large-scale population of healthy volonteers. It gathers a male and female structural atlas constructed from 594 males and 616 females, with their corresponding probability maps of the different labels projected onto the average respective male and female templates. The atlases include 9 regions of interest lens, globe, optic nerve, intraconal and extraconal fat, and four rectus muscles (lateral, medial, inferior and superior).

The dataset includes:



sub_metadata.csv: dataset summary table

template.nii.gz: atlas of the eye images (per sex)

max_prob_map.npy and max_prob_map.nii.gz: maximum probability maps (per sex)

prob_map.npy and prob_map.nii.gz: probability maps (per sex)


Detailed information on the original large-scale cohort, automated segmentation method and unbiased atlas construction is detailed in the README file.

MR-Eye atlas is presented and described in the following article: 

"Eye-Opening Advances: Automated 3D Segmentation, Key Biomarkers Extraction, and the First Large-Scale MRI Eye Atlas", J. Barranco, A. Luyken, H. Kebiri, P. Stachs, P. M. Gordaliza, O. Esteban, Y. Aleman, R. Sznitman, O. Stachs, S. Langner, B. Franceschiello, M. Bach Cuadra, https://doi.org/10.1101/2024.08.15.608051

Works using any of the provided ressources should cite the above-referred article.

Copyright (c) - All rights reserved. Medical Image Analysis Laboratory - Department of Radiology, Lausanne University Hospital (CHUV) and University of Lausanne (UNIL), Lausanne,Switzerland & CIBM Center for Biomedical Imaging. 2024.
description: This work is part of the A-Eye project (2022-2025) supported by the Gelbert Foundation (Geneva, Switzerland).
DOI: 10.26030/1wnj-kt87
title: HARV replication of the BRIC-21 Bacillus subtilis spaceflight samples

description: Previous spaceflight experiments using Bacillus subtilis have reported altered transcriptome profiles during spaceflight compared to matching ground samples. This study tried to replicate those transcriptome changes using High Aspect Ratio Vessels (HARVs). B. subtilis spores were grown in HARVs using the same protocol and growth conditions as the BRIC-21 spaceflight mission. RNA was extracted from the HARV samples and sequenced for differential expression analysis. HARV differentially expressed genes were then compared to the genes identified as differentially expressed in the BRIC-21 mission to access the accuracy of HARVs as a model for spaceflight experiments.
DOI: 10.5281/zenodo.13387832
title: Detecting Chirality-Induced Spin Selectivity in Randomly Oriented Radical Pairs Photogenerated by Hole Transfer. Open data set

description: Data supporting the original figures 2 through 7 of the related publication.
DOI: 10.5281/zenodo.13387833
title: Detecting Chirality-Induced Spin Selectivity in Randomly Oriented Radical Pairs Photogenerated by Hole Transfer. Open data set

description: Data supporting the original figures 2 through 7 of the related publication.
DOI: 10.6084/m9.figshare.26831929
title: Dataset: Solutions and Insights for Agricultural Monitoring, Reporting, and Verification (MRV) from Three Consecutive Issuances of Soil Carbon Credits

description: This repository contains the data shown in figures in the paper "Solutions and Insights for Agricultural Monitoring, Reporting, and Verification (MRV) from Three Consecutive Issuances of Soil Carbon Credits" published in the <i>Journal of Environmental Management </i>(2024). The <code>README.txt</code> file explains the contents of the files in this repository.
DOI: 10.15468/dl.bhc6qz
title: Occurrence Download

description: A dataset containing 15509 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cardamine resedifolia L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 15509 records from 212 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107857-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dm6stt
title: Occurrence Download

description: A dataset containing 8625046 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Occurrence evidence, Material citation, Specimen, Material sample)",
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 8625046 records from 2524 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107829-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.usx3ek
title: Occurrence Download

description: A dataset containing 216 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Benincasa pruriens f. hispida (Thunb.) W.J.de Wilde & Duyfjes, Benincasa pruriens f. pruriens, Benincasa hispida (Thunb.) Cogn., Benincasa vacua (F.Muell.) F.Muell., Benincasa cylindrica Ser., Benincasa hispida var. hispida, Benincasa cerifera Savi, Benincasa pruriens (Parkinson) W.J.de Wilde & Duyfjes)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1943",
 "Year is less than or equal to 2023",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 }
 ]
}

 The dataset includes 216 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066035-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1vq8o3
title: Occurrence Download

description: A dataset containing 425 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pterocephalus spathulatus (Lag.) Coult."
 ]
}

 The dataset includes 425 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010631-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ydkcce
title: Occurrence Download

description: A dataset containing 100 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Echolocating bats of West Java, Indonesia"
 ]
}

 The dataset includes 100 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0252244-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.efkkz4
title: Occurrence Download

description: A dataset containing 8421 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample"
 ]
 },
 "Country is Colombia",
 "Geometry POLYGON((-75.98053 7.95699,-75.30096 7.95699,-75.30096 8.56674,-75.98053 8.56674,-75.98053 7.95699))",
 "HasCoordinate is true",
 "TaxonKey is Aves",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8421 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010638-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mxmj6d
title: Occurrence Download

description: A dataset containing 655 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Coffea mannii (Hook.f.) A.P.Davis)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1943",
 "Year is less than or equal to 2023",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 }
 ]
}

 The dataset includes 655 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066030-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7qwr39
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epidendrum megalocoleum Hágsater"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0157901-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gnr5jb
title: Occurrence Download

description: A dataset containing 152766 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Dioscorea communis (L.) Caddick & Wilkin)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1943",
 "Year is less than or equal to 2023",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 }
 ]
}

 The dataset includes 152766 records from 1029 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066036-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k2xvmn
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Peromyscus polius Osgood, 1904"
 ]
}

 The dataset includes 90 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080611-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tygpzu
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is naturgucker",
 "TaxonKey is Falco deiroleucus Temminck, 1825"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0299783-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5n89sh
title: Occurrence Download

description: A dataset containing 1175 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erigeron laevigatus Rich."
 ]
}

 The dataset includes 1175 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0157902-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ya23j2
title: Occurrence Download

description: A dataset containing 1294 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lotus japonicus (Regel) K.Larsen)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1943",
 "Year is less than or equal to 2023",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 }
 ]
}

 The dataset includes 1294 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066034-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b8dema
title: Occurrence Download

description: A dataset containing 37597 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Amaranthus hybridus L., Amaranthus hybridus E.H.L.Krause, Amaranthus hybridus K.Krause, Amaranthus hybridus Vell., Amaranthus hybridus × Amaranthus tuberculatus var. tuberculatus, Amaranthus hybridus × Amaranthus tuberculatus var. rudis, Amaranthus hybridus × Amaranthus powellii subsp. powellii, Amaranthus hybridus x retroflexus, Amaranthus hybridus var. erythrostachys Moq., Amaranthus hybridus f. aciculatus Thell.)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1943",
 "Year is less than or equal to 2023",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 }
 ]
}

 The dataset includes 37597 records from 782 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0066037-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.35111/qrcj-k950
title: 1997 Mandarin Broadcast News Transcripts (HUB4-NE)

description: <h3>Introduction</h3><br>
<p>This collection consists of 30 hours of transcripts of Mandarin Chinese broadcast news recordings from the following sources: Voice of America (VOA), China Central TV (CCTV) and KAZN-AM, a commercial radio station based in Los Angeles, CA.</p><br>
<p>Of these three sources, the first two comprise the bulk of the collection and are represented in roughly equal amounts. Only a relatively small sample of KAZN-AM recordings is included, owing to the relatively high proportion of unusable material in that source(e.g., commercials, local traffic reports).</p><br>
<p>Corresponding audio files are released as 1997 Mandarin Broadcast News Speech (HUB4-NE)<a href="http://catalog.ldc.upenn.edu/LDC98S73" rel="nofollow"> LDC98S73</a>.</p><br>
<h3>Data</h3><br>
<p>The transcripts were created by native speakers of Mandarin working at LDC. They are in GB-encoded form with SGML tags to identify story boundaries, speaker turn boundaries and phrasal pauses. The tags include time stamps to align the text with the speech data. Word segmentation (white-space between words) is included. A working DTD is provided, and the markup is consistent with that of the 1997 English and Spanish HUB4 collections.</p><br>
<h3>Updates</h3><br>
<p>There are no updates at this time.</p><br>
<h3>Additional Licensing Instructions</h3><br>
<p>This 'members-only' corpora is available to current members who can request the data at the listed reduced-license fee. Contact <a href="mailto:ldc@ldc.upenn.edu">ldc@ldc.upenn.edu</a> for information about becoming a member.</p></br>
Portions © 1997 China Central TV, © 1997 MultiCultural Broadcasting Corporation, © 1997, 1998 Trustees of the University of Pennsylvania
DOI: 10.35111/sxw0-5q10
title: TDT Pilot Study Corpus

description: <h3>Introduction</h3> <p>The TDT Pilot Study corpus was created to support an initiative in "topic detection and tracking." This initiative is directed toward computer processing of language data, both text and speech. The objective is namely to explore techniques for detecting the appearance of new and unexpected topics and for tracking the reappearance and evaluation of them. </p><h3>Data</h3> <p>The TDT corpus comprises a set of stories that includes both newswire (text) and broadcast news (speech). Each story is represented as a stream of text, in which the text is either taken directly from the newswire (Reuters) or is a manual transcription of the broadcast news speech (CNN). The corpus spans the period from July 1, 1994 to June 30, 1995. It contains approximately 16,000 stories, with about half taken from Reuters newswire and half from CNN broadcast news transcripts. </p><p>An integral and key part of the corpus is the annotation of the corpus in terms of the events discussed in the stories. 25 events were defined that span a variety of event types and that cover a subset of the events discussed in the corpus stories. Annotation data for these events are included in the corpus and provide a basis for training TDT systems. </p><h3>Updates</h3> There are no updates at this time.  </br>
Portions © 1994-1995 Cable News Network, LP, LLLP, © 1994-1995 Reuters America, Inc., © 1998 Trustees of the University of Pennsylvania
DOI: 10.35111/t4e1-r703
title: HUB5 Mandarin Transcripts

description: <p><a href="http://catalog.ldc.upenn.edu/LDC98S69" rel="nofollow">LDC98S69</a> - Speech data LDC98T26 - Transcripts</p><br>
<h3>Introduction</h3><br>
<p>This release of HUB5 Mandarin training data consists of 42 calls derived from the CALLFRIEND Mandarin Chinese Mainland Dialect (Language ID) collection. The transcribed data is intended as additional training data in support of the project on Large Vocabulary Conversational Speech Recognition (LVCSR), also sponsored by the U.S. Department of Defense. The transcripts cover a contiguous 5-30 minute segment taken from a recorded conversation lasting up to 30 minutes.</p><br>
<p>LDC has released HUB5 Mandarin Telephone Speech and Transcripts Second Edition (<a href="../../../LDC2018S18">LDC2018S18</a>), which combines the speech and transcripts and make some updates to the release. See catalog entry for more details.</p><br>
<h3>Data</h3><br>
<p>Speakers were solicited by the LDC to participate in this telephone speech collection effort via the internet, publications (advertisements) and personal contacts. A total of 200 call originators were found, each of whom placed a telephone call via a toll-free robot operator maintained by the LDC. Access to the robot operator was possible via a unique Personal Identification Number (PIN) issued by the recruiting staff at the LDC when the caller enrolled in the project. The participants were made aware that their telephone call would be recorded, as were the call recipients. The call was allowed only if both parties agreed to being recorded. Each caller was allowed to talk up to 30 minutes. Upon successful completion of the call, the caller was paid $20 (in addition to making a free long-distance telephone call). Each caller was allowed to place only one telephone call. They were given no guidelines concerning what they should talk about. Once a caller was recruited to participate, he/she was given a free choice of whom to call. Most participants called family members or close friends. All calls originated in North America and were placed to various locations within North America.</p><br>
<h3>Updates</h3><br>
<p>There are no updates at this time.</p></br>
Portions © 1998 Trustees of the University of Pennsylvania