cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/r76ptw8ygy
title: Study and assessment of the applicability of the mitochondrial COI and COII gene regions for molecular genetic diagnostics of the Rhagoletis indifferens Curran species

description: The Western cherry fruit fly Rhagoletis indifferens Curran, 1932 belongs to the Tephritidae family. This North American species is a pest of sweet cherries and cherries, as well as some other members of the genus Prunus. The object of this study, Rhagoletis indifferens, belongs to the “cingulata” group of species, which, in addition to it, includes the species Rhagoletis cingulata (Loew, 1862), Rhagoletis osmanthi Bush, 1966, and Rhagoletis chionanthi Bush, 1966. Since the species Rh. indifferens and Rh. cingulata are not only morphologically very similar, but also affect similar production, there is a need for molecular genetic diagnostic methods that will reliably distinguish these two species from other species and between themselves. According to the obtained data on the COI gene generally in the sample matrix, there is a hiatus − a gap between intra- and interspecific distances. However, the species Rh. cingulata and Rh. indifferens on the dendrogram form a clade corresponding to one species, therefore, it is impossible to distinguish them using the sequences of the COI gene region. However, based on this sequences, it is possible to narrow down the identification by molecular genetic methods to these two species, since they are well separated from other studied species. According to the graph of the distribution of pairwise genetic distances and the dendrogram for the COII gene, there is a lower variability than for the COI gene, and hiatus is not observed not only between the species Rh. cingulata and Rh. indifferens, but also in the whole sample. Thus, based on the COI gene sequence, it is possible to separate the species Rh. indifferens and Rh. cingulata from other species of the genus Rhagoletis studied by us. That is, the COI gene sequence can potentially serve as the basis for further development of molecular genetic identification methods. To study the relationships within the group of “cingulata” species and search for the gene sequence by which it will be possible to reliably distinguish between the species Rh. indifferens and Rh. cingulata, another, possibly more rapidly evolving gene is required.
DOI: 10.17632/v8cy8jf664
title: Undesirable compounds in silage grass

description: “Fungal spoilage and mycotoxin contamination are one of the greatest risks of silage making. It is hypothesized that a high content of ergosterol and polyphenols in silage prove a progressive deterioration of forage quality. Therefore, ergosterol (ERG) has been suggested as a potential indicator of fungal contamination with polyphenols concentration analysis allowing accurate prediction on silage safety. In this sense, it is necessary to identify reliable biochemical indicators to assess the risk of mould contamination in silage. Ergosterol (ERG) is a primary metabolite which shares a biosynthetic pathway of deoxynivalenol and nivalenol. This sterol is the principal component of fungal membranes and represents between 10 to 80% of its constitution. Several studies demonstrated that the ERG was a significant correlation with mycotoxin concentrations found in various forage crops. Besides has been proposed ​as an indicator of fungal contamination for various matrices such as solid plant substrates, foods and raw materials. Phenolic compounds are secondary plant metabolites, synthesised in the shikimate pathway (which provides phenylpropanoids), or via acetate/malonate pathway, producing simple phenols. Besides, the monomeric and polymeric phenols and polyphenols can be products of both pathways. Whilst these compounds are considered natural antioxidants; their oxidation leads to browning and production of toxic compounds oxidation, resulting in rancidity and deterioration of nutritional quality, colour, flavour, texture, and hygiene of silage compromising in that way the ruminant health. .”
DOI: 10.17632/vjty927nmh
title: Data for: Source identification and temporal evolution of trace elements in PM10 collected near to Ny-Ålesund (Norwegian Arctic)

description: Chemical composition of PM10 samples collected near to Ny-Ålesund (Norwegian Arctic) in 2011, 2012 and 2013 spring-summer seasons.
DOI: 10.17632/vvvnd9m865
title: Where we stand: Analysis of ambulance service of Karachi

description: The objectives of the study are, identify patient satisfaction through patient experience by comparing the ambulance services of Karachi in phase 1, compare the standards of local ambulance services with international standards designed for an ambulance in Phase 2, explore and understand the in-depth perspective of stakeholders about the ambulance services in phase 3. To assess the service quality of the ambulance services, we took the model of ServPerf introduced in the critiques of the ServQual model. They took the idea that perceived quality is lead to satisfaction. H1 There is no difference in the perceived quality of service among the ambulance services operated in Karachi H2 There is no difference in the perceived service quality of ambulance services among genders. H3 There is no difference in the perceived quality of service of different age groups. Phase 2 This chapter compares the local ambulance services with the international standards designed for the ambulance services. There are different standards for ambulances like safety and manufacturing, comprehensive covering management, leadership, patient's rights and clinical markers, service delivery standards covering the equipment required to deliver the service. The standard follows for the comparison is designed by the group of committees like the American college of surgeons committee on trauma, American College of Emergency Physicians, National Association of EMS Physicians, pediatric equipment guideline committee – EMSC and American academy of pediatrics". The justification for using this standard is because we are looking for service delivery to patients and the availability of life-saving equipment and medicines are the essential aspect of service delivery. Phase 3 we sought to explore the perspective of key stakeholders about the ambulance service, its operational challenges, international standards, and how to overcome these challenges.
DOI: 10.17632/vxwzj6hkvn
title: Decreases in Distance-to-Default anticipate rating downgrades

description: Procedure to replicate the paper titled: Decreases in Distance-to-Default anticipate rating downgrades
DOI: 10.17632/z4zy523b8c
title: Experimental characterisation and modelling of sugar-filled supramolecular polyurethane

description: In this work, a reusable supramolecular polyurethane was mixed with sugar particles to produce a model composite material with different particle sizes or volume fractions, which were subsequently characterised and modelled. Large strain mechanical properties of the material were analysed in compression at strain rates up to approximately 1800 s-1. A model was developed that combined the known viscoelastic response of the polyurethane with filler reinforcement and strain activated damage equations calibrated against quasi-static experiments. The model provided a good prediction of the high strain rate behaviour.
DOI: 10.17632/zbkxr687sx
title: COVID-19 Subvariant XBB.1.5  scrapped from Twitter 

description: The data present COVID-19 Subvariant XBB.1.5 data extracted using the Twitter application program interface (API).
DOI: 10.17632/zmpc7b6dch
title: Interview scripts (faith conversion in Pakistan)

description: Interview Scripts of video interviews on conversion in Sindh
Researcher and Interviewer: Ghulam Hussain
Copyright: Institute of Policy Studies (IPS) Islamabad
DOI: 10.17632/3pvzbg47d7
title: The cultural tourism development potential of 43 cities in the middle and lower reaches of the Yellow River

description: It is a dataset that could be used to dynamically evaluate the of Cultural Tourism Development Potential of 43 cities in the middle and lower reaches of the Yellow River.
DOI: 10.17632/6h3w4nvpz3
title: Children’s phonological and print awareness

description: preschool children’s phonological and print awareness
DOI: 10.17632/72sh3pp4m2
title: Local IBD Benchmark

description: Simulated local IBD graph files from our paper "Selecting Clustering Algorithms for IBD Mapping". The 'benchmark.tgz' file includes the main dataset with various cluster counts, false-positive, and false-negative edge rates. These simulations were used to test and evaluate the clustering algorithms and characteristics of local IBD graphs. The 'benchmark_realistic.tgz' includes the simulated dataset with realistic clusters counts, false-positive, and false-negative edge rates. The simulations were used to evaluate the performance of clustering algorithms in realistic situations.
DOI: 10.17632/73fz7549bc
title: LINF_280033900

description: Peptide methionine sulfoxide reductase; Leishmania infantum (strain JPCM5)
DOI: 10.17632/bvrrsgm6c6
title: The NSP4 T492I mutation increases SARS-CoV-2 infectivity by altering non-structural protein cleavage. Lin et al

description: Clinical information obtained from GISAID, IF_Change, and unprocessed images of blots and gels in this study.
DOI: 10.17632/c77482jywk
title: LINF_230013200

description: kinesin | KIN-C
Leishmania infantum (strain JPCM5)
DOI: 10.17632/dgwd7dknvn
title: RNA-seq1

description: RNA-seq data
DOI: 10.17632/fkx3s4vxnf
title: CUSP9v3-U3082-part1

description: Label-free live-cell imaging and endpoint cell viability data obtained from exposing the patient derived glioblastoma cell line U3082 (see related article below), on all single drugs of the CUSP9v3 protocol up to all combinations of order 4. The standard-of-care drug, temozolomide, was also used as a single treatment as well as add-on to all combinations. 

There are 4 .zip files containing all the imaging data, one for each 384-well plate used. Every .zip file contains 5544 grayscale images of size 800x992 pixels and every experimental well consists of a temporal sequence of 18 such images. The experiment was performed in quadruplicate and the associated plate layouts used for acoustic liquid dispension are also included as .xlsx files. The .log file contains the cell viability data for all plates.
DOI: 10.17632/gdkmtkr3r5
title: DP600 in-situ microstructural crack nucleation

description: Please refer to the publication entitled "Towards physical insights on microstructural damage nucleation from data analytics" by B.C. Cameron and C.C. Tasan, currently in submission.
DOI: 10.17632/gt6syydkt3
title: Musashi-1 and miR-147 precursor interaction mediates synergistic tumorigenesis induced by co-infection of avian retroviruses in chicken

description: The original data of the western blot results in the musashi-1 and miR-147 precursor interaction mediates synergistic tumorigenesis induced by co-infection of avian retroviruses in chicken
DOI: 10.17632/jycfnxxysp
title: Data for: An application of geographically weighted quantile LASSO to weather index insurance design published by RAC-Revista de Administração Contemporânea

description: Objective: This article studies the efficiency of a novel regression approach, the geographically weighted quantile LASSO (GWQLASSO) in the modeling of yield-index relationship for weather index insurance products. GWQLASSO allows regression coefficients to vary spatially while using the information from neighboring locations to derive robust estimates. The LASSO component of the model facilitates the selection of relevant explanatory variables. Methodology: A weather index insurance (WII) product is developed based on a 1-month standardized precipitation index (SPI) derived from a daily precipitation dataset for 41 weather stations in the State of Paraná (Brazil) for the period of 1979 through 2015. Soybean yield data are also used for the 41 municipalities from 1980 through 2015. The effectiveness of the GWQLASSO product is evaluated against a classic quantile regression approach and a traditional yield insurance product using the Spectral Risk Measure (SRM) and the Mean Semi-deviation. Results: While GWQLASSO proved as effective as quantile regression it outperformed the yield insurance product. Conclusion: The GWQLASSO is an alternative to the crop insurance market in Brazil and other locations with limited data. About the datasets: Daily precipitation (mm) and yearly soybean crop yields (kg/ha) at the municipality level in Brazil. The precise location of each weather station is also present in the precipitation dataset.
DOI: 10.17632/k4mn6jrb9c
title: Data relate to "Mechanism of Histone Arginine Methylation Dynamic Change on cellular stress"

description: The following uploaded data are resources data, including western blot, qPCR Ct value, microscopy data. RNA-seq and CUT&Tag-seq data are uploaded to GEO, and the accession number was noted in the manuscript.
DOI: 10.17632/mvnz46kfwn
title: ARID1A depletion

description: Acute depletion of the ARID1A subunit of SWI/SNF complexes
DOI: 10.17632/ndbcz68rdw
title: dataset

description: A cross-sectional study was conducted in teaching hospitals affiliated with Zahedan University of Medical Sciences, Iran, to investigate whether aspects of personnel commitment have any relationship with overall infection control level in operating theatres. Data was gathered using questionnaires and checklists.
DOI: 10.17632/pt84rh6rfh
title: Persistence of protective anti-poliovirus antibody levels in 4-year-old children previously primed with Picovax®, a trivalent, aluminium-adjuvanted reduced dose inactivated polio vaccine (NCT04448132)

description: IPV-Al (Picovax®) is a reduced dose, aluminium hydroxide (Al(OH)3)-adjuvanted IPV vaccine developed to meet the demand for effective and affordable inactivated polio vaccines (IPVs). IPV-Al contains one-tenth of the standard dose of IPV.

The trial was a phase 4, open-label, multicentre extension trial with healthy subjects who had previously been vaccinated with IPV-Al at 2, 4, 6 months of age in the primary trial (NCT03025750), and again at 15-18 months of age in the first extension trial (NCT03671616). In this trial (NCT04448132), levels of antibodies against poliovirus types 1, 2 and 3 after immunisation with IPV-Al were measured in the trial subjects at the age of 4 years. An additional IPV-Al dose (investigational vaccine) and doses of concomitant vaccines (DTwP/TdaP, DTP/Hib and Varicella, in line with the national vaccination program) were administered and the booster response to IPV-Al was investigated one month after administration.

The primary objectives: 
To describe the seroprotection in 4-year-old children previously immunised with IPV-Al by measuring the response to an additional dose of IPV-Al. 

The secondary objectives:
- To describe the persistence of antibodies against poliovirus types 1, 2 and 3 in subjects previously immunised with IPV-Al measured in blood samples before administration of an additional IPV-Al AJV dose
- To describe the booster effect of an additional IPV-Al AJV dose in subjects previously immunised with IPV-Al
- To describe the levels of antibodies against poliovirus types 1, 2 and 3 in subjects previously immunised with IPV-Al measured before and after administration of an additional IPV-Al dose
- To describe the safety profile of an additional IPV-Al AJV dose given at 4 years of age to subjects previously immunised with IPV-Al

Trial population: 163 healthy 4-year-old children of either sex previously immunised with IPV-Al AJV in the primary and the first extension trial.

The data available are the core data from the second extension trial, with healthy 4-year old subjects vaccinated with an additional dose of IPV-Al.
DOI: 10.17632/sxpdsszps8
title: Longitudinal Quasi-Experimental Assessment Data: Kazakhstan

description: The data in this paper pertain to those analyzed as part of a pilot monitoring study as described by Courtney et al. [1]. While the study reported on the results for three languages, the paper at hand references the results for just one study involving the Kazakh medium-of-instruction. The first variable in that data includes is (Excel column A) ‘Student_id’, which provides a unique anonymized student ID number for each student. The next six variables in the data vary between-schools: (B) ‘experiment’, for which each school is defined as either a pilot (experiment) or control school; (C) ‘Region’, defining the region that each school is situated in the country; (D) School_name, the name assigned to each unique school; (E) ‘Language’ defining the medium-of-instruction used in each school (Kazakh or Russian); (F) ‘School_type’ where schools are defined as either (i) small, (ii) gymnasium, (iii) lyceum, or (iv) common (common used as baseline in modelling, see R code for recodes into numeric). (G) School location follows with schools defined as either (i) city or (ii) rural. Thereafter, the within-school variable, (H) ‘Gender’ is given for which each child is defined as either male or female. In addition, columns I to CN pertain to the item-response data for the project (for all elements, 0 = incorrect, 1 = correct) for each child on each item in the five tests. 2015 Test: Items OG1 to OG5.4 (columns I-S; link items for 2015 are OG2.2A, OG2.3A, OG3A; link items for 2016 are OG2.2B, OG2.3B, OG3B, columns T, U, and W). 2016 Test: Items OG2.2 to OG11.2 (columns T-AI; link items for 2016 are OG11.1A and OG11.2A; link items for 2017 are OG11.1B and OG11.2B, columns AJ and AK). 2017 Test: Items OG11.1 to K3.6 (columns AJ-AU; link items for 2017 are K3.3A and K3.6A; link items for 2018 are K3.3B and K3.6B, columns BP and BO). 2018 Test: Items K4.1 to K3.3 (AV-BP; link items for 2018 are K10.2A and K13.4A; link item for 2019 are K10.2B and K13.4B, columns BU and CC). 2019 Test: Items X19K1 to K6 (BQ-CN). References: [1] Courtney, M. G. R., Rakhymbayeva, Z., Shilibekova, A., Ziyedenova, D., Soltangazina, S., Muratkyzy, A., Goodman, B., & Olzhayeva, A. (2022). Kazakh, Russian, and Uyghur child language literacy: The role of updated content of education on longitudinal growth trajectories in Kazakhstan. Studies in Educational Evaluation, 75(101189). doi:10.1016/j.stueduc.2022.101189
DOI: 10.17632/tfz2hgjtzk
title: Data for: Global Factors, Uncertainty, Weather Conditions and Energy Prices: On the drivers of the duration of commodity price cycle phases

description: Supporting materials Title: "Global Factors, Uncertainty, Weather Conditions and Energy Prices: On the drivers of the duration of commodity price cycle phases" Authors: Luca Agnello, Vítor Castro, Shawkat Hammoudeh, and Ricardo M. Sousa.
DOI: 10.17632/v7nbzyb5fv
title: Data for: A Multi-Proxy Provenance Study of Eocene to Oligocene Sandstones in the Salin Sub-basin, Myanmar

description: Supplementary_MatsA is a summary of the heavy mineral assemblages present in each sample, as well as a summary of all accessory heavy mineral phases encountered. Supplementary_MatsB is a summary of the U-Pb detrital geochronological data acquired through LA-ICP-MS, showing the number of concordant and discordant zircons.
DOI: 10.17632/vbk6h8vcyy
title: Tissue homeostasis in sponges: quantitative analysis of cell proliferation and apoptosis. Leucosolenia variabilis

description: Here we provide data underlying the upcoming publication "Tissue homeostasis in sponges: quantitative analysis of cell proliferation and apoptosis". 
These data provide a quantitative description of cell proliferation and apoptosis in intact tissues of marine sponge, Leucosolenia variabilis (class Calcarea). Tissues of Leucosolenia are highly proliferative, indicating either high rates of cell turnover or body growth. The main fraction of proliferating cells are choanocytes, food-entrapping flagellated cells of the aquiferous system. They also seem to be the main source of new mesohyl and pinacoderm cells. The numbers of apoptotic cells in intact tissues are insignificant; both choanocytes and mesohyl cells undergo apoptosis.
CLSM folder contains Z-stacks obtained via confocal laser scanning microscope. Z-stacks were processed in Bitplane Imaris software
 and saved in .ems format.
Apoptosis subfolder contains Z-stacks obtained during the experiment "Investigation of apoptotic activity in intact tissues". Tissues are stained with DAPI (channel 1; cell nuclei), CellEvent (channel 2; nuclei of apoptotic cells), anti-acetylated alpha-tubulin antibodies (channel 3; choanocyte flagella).
Intact tissues subfolder contains Z-stacks obtained during the experiment "Study of cell proliferation with CLSM". Tissues are stained with DAPI (channel 1; cell nuclei), EdU (channel 3; 12 hours of incubation; nuclei of S-phase cells), anti-phospho-histone 3 antibodies (channel 4; nuclei of M-phase cells), anti-acetylated alpha-tubulin antibodies (channel 2; choanocyte flagella).
In vivo apoptosis subfolder contains Z-stacks obtained during the experiment "Investigation of apoptotic activity in intact tissues". Cell suspension is stained with Hoechst (channel 1; cell nuclei), CellEvent (channel 2; nuclei of apoptotic cells), TMRE (channel 3; functional mitochondria).
Flow cytometry folder contains raw .fcs files.
Cell cycle subfolder contains files obtained during the experiment "Evaluation of cell cycle distribution". Cell suspensions are stained with propidium iodide (PE-A channel).
In vivo apoptosis subfolder contains files obtained during the experiment "Investigation of apoptotic activity in intact tissues". Cell suspensions are stained with CellEvent (FITC-A channel) and TMRE (PE-A channel).
Apoptosis fixed contains files obtained during the experiment "Investigation of apoptotic activity in intact tissues". Cell suspensions are stained with CellEvent (FITC-A channel)
DOI: 10.17632/w75ptk9xp8
title: LINF_250018900

description: cullin-like protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/x7kcjpfhwc
title: Статестичні дані та емпіричні методи достідження автонаративу та мотивації досягнення особистості. Зображення норативів

description: Додатки до психолінгвістичного дослідження "Роль автонаративу в діагностиці мотивації досягнення успіху особистості". Описані методи: Тест «Готовність до саморозвитку» В. Л. Павлова; Тест на діагностику мотивації досягнення; Коефіцієнт дієслівності, коефіцієнт емболії та коефіцієнт кореляції. Розрахунок коефіцієнтів кореляції, та всіх необхідних проміжних даних здійснювався за допомогою комп'ютерної обробки, яка обслуговувалася пакетом програм IBM SPSS Statistics 20. Також тут є дані стосовно вибірки дослідження та акт його впровадження.
DOI: 10.17632/xcyfctdg4v
title: 2022 Thailand Ground Truth Data for Generation of Agriculture Statistics 

description: This database was collected at field scale by our field survey experts in Nakhon Sawan province, Thailand, in 2022. As the fieldwork result, 156 points are collected. Therein, there were 90 GT points visited in the field using the global positioning system (GPS) waypoints and 66 GT points were also collected with the windshield survey data collection approach. 
According to GT database format, our database contains 156 records of a geographic layer in shapefile format (point), and the geographic coordinate system is GCS_WGS_1984. In addition, each record corresponds to a point format with ten attributes, including a unique feature ID, the format of the feature (such as point), type of land cover of the point, type of crop of the point, name of the ground truth point when collecting in the field, date and time of the ground truth data collection, X and Y coordination of the point, and intercrop (presence or absence of intercropping [single crop, mixed crop, etc.]).
DOI: 10.17632/xn3z368d4t
title: Dynamics of dopamine and other monoamines content in some rat brain morphological structures after single low-dose carbon nuclei irradiation

description: Dataset