cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4062440
title: Hyperpolarized MRI RTHawk Example Datasets

description: Example datasets from Hyperpolarized metabolic MRI studies, acquired using an autonomous scanning protocol with the RTHawk Research System See accompanying papers for descriptions of RTHawk-based sequences used in this data: https://www.ncbi.nlm.nih.gov/pubmed/30277268 or https://arxiv.org/pdf/2008.08794 https://onlinelibrary.wiley.com/doi/abs/10.1002/mrm.28204 or https://arxiv.org/pdf/2008.08800
DOI: 10.5281/zenodo.4062439
title: Hyperpolarized MRI RTHawk Example Datasets

description: Example datasets from Hyperpolarized metabolic MRI studies, acquired using an autonomous scanning protocol with the RTHawk Research System See accompanying papers for descriptions of RTHawk-based sequences used in this data: https://www.ncbi.nlm.nih.gov/pubmed/30277268 or https://arxiv.org/pdf/2008.08794 https://onlinelibrary.wiley.com/doi/abs/10.1002/mrm.28204 or https://arxiv.org/pdf/2008.08800
DOI: 10.6084/m9.figshare.13030844
title: R0235_20181027a_videos

description: Rat 0235, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.34740/kaggle/dsv/1530081
title: COVID-19 cases by Continent
DOI: 10.25810/00zk-yj28.16
title: Norwegian Newspaper Coverage of Climate Change or Global Warming, 2000-2020 - August 2020

description:         The Media and Climate Change Observatory Data monitors 120 sources (across newspapers, radio and TV) in 54 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.6084/m9.figshare.13017812
title: All_SNPs.vcf

description: Salinity is a major abiotic constraint for rice farming. Although rice is sensitive to salt stress, tremendous natural variability in world germplasm provides opportunity for both basic and applied research to improve its adaptation under saline environment. The whole genome sequences of two salt tolerant (Pokkali and Nona Bokra) and three salt susceptible (Bengal, Cocodrie, and IR64) rice genotypes were analyzed to provide genetic insights into salt tolerance mechanisms through discovery of DNA polymorphisms and their consequences. The frequency and density of SNPs and InDels was highest in pairs involving Bengal followed by Cocodrie and IR64. Analysis of DNA polymorphisms between salt tolerant and salt susceptible genotypes revealed 2347 nonsynonymous SNPs and 51 frameshift mutations. The integrated analysis of genome-wide polymorphism data with QTL mapping and expression profiling resulted in identification of 396 and 573 differentially expressed genes with large effect variants, which were involved in ion transport, oxidative stress tolerance, signal transduction, stress response, and transcriptional regulation. Overall, the complexity in salt tolerance was clearly apparent due to involvement of genes associated with multiple salt tolerance mechanisms. This study, however, provided a useful genomic resource on salt stress related genes and their variants to design salt tolerant rice varieties.
DOI: 10.6084/m9.figshare.13017809
title: All_Indels.vcf

description: Salinity is a major abiotic constraint for rice farming. Although rice is sensitive to salt stress, tremendous natural variability in world germplasm provides opportunity for both basic and applied research to improve its adaptation under saline environment. The whole genome sequences of two salt tolerant (Pokkali and Nona Bokra) and three salt susceptible (Bengal, Cocodrie, and IR64) rice genotypes were analyzed to provide genetic insights into salt tolerance mechanisms through discovery of DNA polymorphisms and their consequences. The frequency and density of SNPs and InDels was highest in pairs involving Bengal followed by Cocodrie and IR64. Analysis of DNA polymorphisms between salt tolerant and salt susceptible genotypes revealed 2347 nonsynonymous SNPs and 51 frameshift mutations. The integrated analysis of genome-wide polymorphism data with QTL mapping and expression profiling resulted in identification of 396 and 573 differentially expressed genes with large effect variants, which were involved in ion transport, oxidative stress tolerance, signal transduction, stress response, and transcriptional regulation. Overall, the complexity in salt tolerance was clearly apparent due to involvement of genes associated with multiple salt tolerance mechanisms. This study, however, provided a useful genomic resource on salt stress related genes and their variants to design salt tolerant rice varieties.
DOI: 10.6084/m9.figshare.13017809.v1
title: All_Indels.vcf

description: Salinity is a major abiotic constraint for rice farming. Although rice is sensitive to salt stress, tremendous natural variability in world germplasm provides opportunity for both basic and applied research to improve its adaptation under saline environment. The whole genome sequences of two salt tolerant (Pokkali and Nona Bokra) and three salt susceptible (Bengal, Cocodrie, and IR64) rice genotypes were analyzed to provide genetic insights into salt tolerance mechanisms through discovery of DNA polymorphisms and their consequences. The frequency and density of SNPs and InDels was highest in pairs involving Bengal followed by Cocodrie and IR64. Analysis of DNA polymorphisms between salt tolerant and salt susceptible genotypes revealed 2347 nonsynonymous SNPs and 51 frameshift mutations. The integrated analysis of genome-wide polymorphism data with QTL mapping and expression profiling resulted in identification of 396 and 573 differentially expressed genes with large effect variants, which were involved in ion transport, oxidative stress tolerance, signal transduction, stress response, and transcriptional regulation. Overall, the complexity in salt tolerance was clearly apparent due to involvement of genes associated with multiple salt tolerance mechanisms. This study, however, provided a useful genomic resource on salt stress related genes and their variants to design salt tolerant rice varieties.
DOI: 10.6084/m9.figshare.12971798.v1
title: Apoptosis_Panel_Data_11-09_ok.xls

description: Dataset generated and analyzed in the work entitled "Investigation of INDEL variants in apoptosis: the relevance to gastric cancer". More details are found in the article.
DOI: 10.6084/m9.figshare.13035050
title: Athlete_Non-Athlete MH Survey - ALL DATA.csv

description: Data was collected from 753 participants on athlete mental health as the United Kingdom was emerging from a COVID-19 lockdown with a group of non-athletes used as a comparison. Data was collected on participants athletic identity, resilience, wellbeing, depression, anxiety and loneliness using a cross-sectional online survey design using the following measures:The Athletic Identity Measurement Scale (Brewer et al., 1993)The Brief Resilience Scale (Smith et al., 2008)The Mental Health Continuum Short Form (Keyes, 2005)The Hospital Anxiety and Depression Scale (Zigmond and Snaith, 1983)The Short Loneliness Scale (Gierveld and Tilburg, 2006)
DOI: 10.5281/zenodo.3920875
title: Dataset for molecular simulations of human IRE1 tetramer models.

description: Dataset from SymmDock protein-protein docking of different conformers of IRE1 tetramers (dimer of back-to-back dimers); input files scripts and trajectories from subsequent MD simulations using Gromacs. Videos showing PC1 and PC2 of tetramers <em>y</em>IRE1<sub>4</sub> (S1, S2), <em>h</em>IRE1<sub>4</sub>(R) (S3, S4), <em>h</em>IRE1<sub>4</sub>(L) (S5,S6) and <em>h</em>IRE1<sub>4</sub>(S) (S7,S8), in avi format.
description: Funding sources: MSCA-ITN 675448 (Trainers); MSCA-RISE 734749 (Inspired); Swedish research council (grant 2019-3684); Hasselblad Foundation; Swedish foundation for strategic research (grant ITM17-0431), and Elisabeth and Alfred Ahlqvist Stiftung. The Swedish national infrastructure for computing is gratefully acknowledged for generous allocations of computing time at Swedish supercomputing centers C3SE and PDC.
DOI: 10.5281/zenodo.3920874
title: Dataset for molecular simulations of human IRE1 tetramer models.

description: Dataset from SymmDock protein-protein docking of different conformers of IRE1 tetramers (dimer of back-to-back dimers); input files scripts and trajectories from subsequent MD simulations using Gromacs. Videos showing PC1 and PC2 of tetramers <em>y</em>IRE1<sub>4</sub> (S1, S2), <em>h</em>IRE1<sub>4</sub>(R) (S3, S4), <em>h</em>IRE1<sub>4</sub>(L) (S5,S6) and <em>h</em>IRE1<sub>4</sub>(S) (S7,S8), in avi format.
description: Funding sources: MSCA-ITN 675448 (Trainers); MSCA-RISE 734749 (Inspired); Swedish research council (grant 2019-3684); Hasselblad Foundation; Swedish foundation for strategic research (grant ITM17-0431), and Elisabeth and Alfred Ahlqvist Stiftung. The Swedish national infrastructure for computing is gratefully acknowledged for generous allocations of computing time at Swedish supercomputing centers C3SE and PDC.
DOI: 10.6084/m9.figshare.13040078
title: Dataset - Apoptosis Panel

description: Dataset generated and analyzed in the work entitled "Investigation of INDEL variants in apoptosis: the relevance to gastric cancer". More details are found in the article. In order to protect participant identities, age is presented here as a range.
DOI: 10.6084/m9.figshare.13040078.v1
title: Dataset - Apoptosis Panel

description: Dataset generated and analyzed in the work entitled "Investigation of INDEL variants in apoptosis: the relevance to gastric cancer". More details are found in the article. In order to protect participant identities, age is presented here as a range.
DOI: 10.6084/m9.figshare.13030844.v1
title: R0235_20181027a_videos

description: Rat 0235, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12971798.v3
title: Dataset - Apoptosis Panel - Old Version

description: Dataset generated and analyzed by Cavalcante et al.
DOI: 10.6084/m9.figshare.12971798
title: Dataset - Apoptosis Panel - Old Version

description: Dataset generated and analyzed by Cavalcante et al.
DOI: 10.6084/m9.figshare.12971798.v2
title: Dataset - Apoptosis Panel - Cavalcante et al.

description: Dataset generated and analyzed in the work entitled "Investigation of INDEL variants in apoptosis: the relevance to gastric cancer". More details are found in the article. In order to protect participant identities, age is presented here as a range.
DOI: 10.6084/m9.figshare.12974225
title: Example Data for Bayesian UNet Brain Segmentation

description: quick brain segmentation example<br>example results are provided, for reference
DOI: 10.6084/m9.figshare.12974225.v3
title: Example Data for Bayesian UNet Brain Segmentation

description: quick brain segmentation example<br>example results are provided, for reference
DOI: 10.6084/m9.figshare.12974225.v2
title: Example Data for Bayesian UNet Brain Segmentation

description: quick brain segmentation example
DOI: 10.5281/zenodo.4060128
title: ORCA. IT: a new web-based tool for assessing online reading search and comprehension abilities in students reveals effects of gender, school type and reading ability. Frontiers in psychology, 10, 2433.

description: Dataset containing the raw scores of the participants described in the paper "ORCA. IT: a new web-based tool for assessing online reading search and comprehension abilities in students reveals effects of gender, school type and reading ability", published in <em>Frontiers in Psychology</em>, <em>10</em>, 2433.
description: This publication was supported by the CARIPLO Foundation (Grant 2017-NAZ-0131 "New technologies for education and their impact on students' well-being and inclusion") and by the Italian Ministry of Health (Grant code RC 2018-2019).
DOI: 10.5281/zenodo.4060127
title: ORCA. IT: a new web-based tool for assessing online reading search and comprehension abilities in students reveals effects of gender, school type and reading ability. Frontiers in psychology, 10, 2433.

description: Dataset containing the raw scores of the participants described in the paper "ORCA. IT: a new web-based tool for assessing online reading search and comprehension abilities in students reveals effects of gender, school type and reading ability", published in <em>Frontiers in Psychology</em>, <em>10</em>, 2433.
description: This publication was supported by the CARIPLO Foundation (Grant 2017-NAZ-0131 "New technologies for education and their impact on students' well-being and inclusion") and by the Italian Ministry of Health (Grant code RC 2018-2019).
DOI: 10.25810/zb7c-gf43.8
title: Oceania Newspaper Coverage of Climate Change or Global Warming, 2000-2020 - August 2020

description:         The Media and Climate Change Observatory Data monitors 120 sources (across newspapers, radio and TV) in 54 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.5517/ccdc.csd.cc25pc8j
title: CCDC 2016527: Experimental Crystal Structure Determination

description: Related Article: Aymeric Dajnak, Eddy Maerten, Nathalie Saffon-Merceron, Antoine Baceiredo, Tsuyoshi Kato|2020|Organometallics|39|3403|doi:10.1021/acs.organomet.0c00489
DOI: 10.5517/ccdc.csd.cc25pcfp
title: CCDC 2016532: Experimental Crystal Structure Determination

description: Related Article: Aymeric Dajnak, Eddy Maerten, Nathalie Saffon-Merceron, Antoine Baceiredo, Tsuyoshi Kato|2020|Organometallics|39|3403|doi:10.1021/acs.organomet.0c00489
DOI: 10.5517/ccdc.csd.cc25cj69
title: CCDC 2007070: Experimental Crystal Structure Determination

description: Related Article: Fei Yu, Bao-Qian Ji, Marko Jagodič, Yan-Min Su, Shan-Shan Zhang, Lei Feng, Mohamedally Kurmoo, Zvonko Jagličić, Di Sun|2020|Inorg.Chem.|59|13524|doi:10.1021/acs.inorgchem.0c01915
DOI: 10.5517/ccdc.csd.cc25cb85
title: CCDC 2006886: Experimental Crystal Structure Determination

description: Related Article: J.F. Van der Maelen, M. Ceroni, J. Ruiz|2020|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|76|802|doi:10.1107/S2052520620009889
DOI: 10.5517/ccdc.csd.cc24lpq5
title: CCDC 1984177: Experimental Crystal Structure Determination

description: Related Article: A. Rivas Marquina, F. Movilla, O.C. Sánchez Montilva, E. Rentschler, L. Carrella, P. Albores, F. Di Salvo|2020|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|76|825|doi:10.1107/S2052520620010008
DOI: 10.5517/ccdc.csd.cc24lpr6
title: CCDC 1984178: Experimental Crystal Structure Determination

description: Related Article: A. Rivas Marquina, F. Movilla, O.C. Sánchez Montilva, E. Rentschler, L. Carrella, P. Albores, F. Di Salvo|2020|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|76|825|doi:10.1107/S2052520620010008
DOI: 10.5517/ccdc.csd.cc247r05
title: CCDC 1973646: Experimental Crystal Structure Determination

description: Related Article: Ya-Fang Gao, Zhi-Xu Zhang, Tie Zhang, Chang-Yuan Su, Wan-Ying Zhang, Da-Wei Fu|2020|Mater. Chem. Front.|4|3003|doi:10.1039/D0QM00360C
DOI: 10.5517/ccdc.csd.cc25qxsm
title: CCDC 2018031: Experimental Crystal Structure Determination

description: Related Article: Ya-Fang Gao, Zhi-Xu Zhang, Tie Zhang, Chang-Yuan Su, Wan-Ying Zhang, Da-Wei Fu|2020|Mater. Chem. Front.|4|3003|doi:10.1039/D0QM00360C
DOI: 10.25345/c5fz1k
title: MassIVE MSV000086221 - Microbial and metabolic succession on common building materials under high humidity conditions
title: The impact of material chemical composition on microbial growth on building materials remains relatively poorly understood. We investigate the influence of the chemical composition of material extractives on microbial growth and community dynamics on 30 different wood species that were naturally inoculated, wetted, and held at high humidity for several weeks. Microbial growth was assessed by visual assessment and molecular sequencing. Unwetted material powders and microbial swab samples were analyzed using reverse phase liquid chromatography with tandem mass spectrometry. Different wood species demonstrated varying susceptibility to microbial growth after 3 weeks and visible coverage and fungal qPCR concentrations were correlated (R2 = 0.55). Aspergillaceae was most abundant across all samples; Meruliaceae was more prevalent on 8 materials with the highest visible microbial growth. A larger and more diverse set of compounds was detected from the wood shavings compared to the microbial swabs, indicating a complex and heterogeneous chemical composition within wood types. Several individual compounds putatively identified in wood samples showed statistically significant, near-monotonic associations with microbial growth, including C11H16O4, C18H34O4, and C6H15NO. A pilot experiment confirmed the inhibitory effects of dosing a sample of wood materials with varying concentrations of liquid C6H15NO (assuming it presented as Diethylethanolamine). [doi:10.25345/C58B5B]
DOI: 10.25810/47q1-ts57
title: Russian Newspaper Coverage of Climate Change or Global Warming, 2000-2020 - August 2020

description:         The Media and Climate Change Observatory Data monitors 120 sources (across newspapers, radio and TV) in 54 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.15139/s3/igwlmu
title: Patient Education Materials

description: Patient Education Materials collected and stored (with permission) as part of the "Addressing migrant and seasonal farmworker health disparities with information resources" project.
DOI: 10.18112/openneuro.ds003233.v1.1.0
title: Think Like an Expert
DOI: 10.15139/s3/dxqymx
title: Dissemination Materials

description: Dissemination materials for the "addressing migrant and seasonal farmworker health disparities with information resources" grant (G08LM013198)
DOI: 10.25810/37f9-1j65.29
title: Spanish Newspaper Coverage of Climate Change or Global Warming, 2000-2020 - August 2020

description:         The Media and Climate Change Observatory Data monitors 120 sources (across newspapers, radio and TV) in 54 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.25810/qt7k-6r09.16
title: Swedish Newspaper Coverage of Climate Change or Global Warming, 2000-2020 - August 2020

description:         The Media and Climate Change Observatory Data monitors 120 sources (across newspapers, radio and TV) in 54 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.5281/zenodo.4062491
title: FOP nutrient labels in Argentina: purchase intent, perception of healthiness and understanding in three processed food categories.

description: Data analysis (non-statistically significant results) and raw survey response data.
DOI: 10.25810/8196-e820.29
title: United Kingdom Newspaper Coverage of Climate Change or Global Warming, 2000-2020 - August 2020

description:         The Media and Climate Change Observatory Data monitors 120 sources (across newspapers, radio and TV) in 54 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.5281/zenodo.4062490
title: FOP nutrient labels in Argentina: purchase intent, perception of healthiness and understanding in three processed food categories.

description: Data analysis (non-statistically significant results) and raw survey response data.
DOI: 10.15152/qdb.237
title: QDB archive #237

description: This QDB archive contains data and model(s) from the following publication: Zukić, S.; Maran, U. Modeling of antiproliferative activity measured in HeLa cervical cancer cells in a series of xanthene derivatives. SAR QSAR Environ. Res. 2020. (submitted)
DOI: 10.23641/asha.13022825
title: Language development in FXS (Brady et al., 2020)

description: <b>Purpose:</b> The aim of this study was to investigate language growth in individuals with fragile X syndrome (FXS) from early childhood to adolescence and the influence of maternal responsivity on language growth.<b>Method: </b>We conducted a longitudinal analysis of language development in 55 youths (44 males, 11 females) with FXS. Data collection spanned the ages of 11–216 months. We measured expressive and receptive vocabulary with standardized tests. The number of different words and mean length of utterance were obtained from language sample analyses of mother–child interactions. We also measured maternal comments (responsivity indicator) produced during the language samples and child nonverbal IQ.<b>Results: </b>Growth models indicated that rates of number of different words and receptive vocabulary were related to maternal commenting. Mean length of utterance did not change significantly over time. Expressive vocabulary measured with a standardized test grew, but the growth was not related to maternal commenting. Nonverbal IQ was related to all language outcomes at age of 10 years and to changes over time in vocabulary. Visual analysis indicated that the highest scores on standardized tests were produced by girls; however, measures derived from language sample analyses appeared similar for boys and girls. Language models for boys only were similar to the total sample models with lower scores at age of 10 years for some outcomes.<b>Conclusion:</b> Results of persistent language impairments for most youths with FXS suggest the need for continued, focused interventions aimed at improved language productions in addition to a responsive environment.<br><b>Supplemental Material S1. </b>Models rerun excluding females. <br>Brady, N. C., Fleming, K., Bredin-Oja, S. L., Fielding-Gebhardt, H., & Warren, S. F. (2020). Language development from early childhood to adolescence in youths with fragile X syndrome. <i>Journal of Speech, Language, and Hearing Research.</i> Advance online publication. https://doi.org/10.1044/2020_JSLHR-20-00198