cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.akrusy
title: Occurrence Download

description: A dataset containing 657 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Dioncophyllaceae"
 ]
}

 The dataset includes 657 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013928-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6c8j4a
title: Occurrence Download

description: A dataset containing 3707265 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Accipiter cooperii (Bonaparte, 1828)",
 "Year is greater than or equal to 1950",
 {
 "or" : [
 "GadmGid is USA",
 "GadmGid is CAN",
 "GadmGid is MEX"
 ]
 }
 ]
}

 The dataset includes 3707265 records from 114 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013904-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6bav5g
title: Occurrence Download

description: A dataset containing 80022 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pionus maximiliani (Kuhl, 1820)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 80022 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013905-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ja5xmb
title: Occurrence Download

description: A dataset containing 1129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Isoperla grammatica (Poda, 1761)",
 "Geometry POLYGON((-8.00174339329464 54.1998526673513, 0.202120938926891 54.1998526673513, 0.202120938926891 61.2628565887411, -8.00174339329464 61.2628565887411, -8.00174339329464 54.1998526673513))",
 "CoordinateUncertaintyInMeters is 0,101",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1129 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013929-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zybe3m
title: Occurrence Download

description: A dataset containing 186198 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Dennstaedtiaceae"
 ]
}

 The dataset includes 186198 records from 953 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013900-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b4fnu3
title: Occurrence Download

description: A dataset containing 6281 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Dipentodontaceae"
 ]
}

 The dataset includes 6281 records from 180 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013931-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26082733.v1
title: (03) AL-constrained materials with DFT relaxation.

description: The 24,743 materials whose DFT relaxation converged (out of 26,000). We provide output.dat file, which cover the result of DFT calculations: E_start/atom, E_final/atom, E_diff/atom, E_conv, F_max (eV/A), N_step, d_latt (A) d_xyz (A). In each folder with material ID, we include material structure files (POSCAR: before DFT relaxation, CONTCAR: after relaxation).As the header of the material ID, we use the following abbreviations: Triangular: tri, Honeycomb: hon, Kagome: kag, Square: sqr, Elongated triangular: elt, Snub square: sns, Truncated square: tsq, Small rhombitrihexagonal: srh, Snub hexagonal: snh, Truncated hexagonal: trh, Great rhombitrihexagonal: grt, Lieb: lieb
DOI: 10.15468/dl.zf76hj
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Guizotia abyssinica",
 "Country is Mexico",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082186-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xyeamz
title: Occurrence Download

description: A dataset containing 114 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Specimen, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mangifera caesia"
 ]
}

 The dataset includes 114 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082185-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dwjzum
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Azadirachta indica",
 "Country is Antigua and Barbuda",
 "HasCoordinate is true"
 ]
}

 The dataset includes 51 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082187-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jkmmez
title: Occurrence Download

description: A dataset containing 7398 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Azadirachta indica",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7398 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082188-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.63z5gd
title: Occurrence Download

description: A dataset containing 374546659 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Magnoliopsida"
 ]
}

 The dataset includes 374546659 records from 13711 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011277-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rsbwg7
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Viburnum annamensis Fukuoka)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008633-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tj5dsw
title: Occurrence Download

description: A dataset containing 1496 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Viburnum phlebotrichum Siebold & Zucc.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1496 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008634-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rns68u
title: Occurrence Download

description: A dataset containing 3053 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Viburnum setigerum Hance)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3053 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008636-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x7qn7a
title: Occurrence Download

description: A dataset containing 4989 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-92.42273 28.2584,-73.81241 28.2584,-73.81241 47.06679,-92.42273 47.06679,-92.42273 28.2584))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cornus amomum Mill."
 ]
}

 The dataset includes 4989 records from 109 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008635-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15258373
title: Pneumonia Detector: Development of a Deep Learning-Based Pneumonia Detection System Using Chest X-ray Images

description: Pneumonia is a critical respiratory infection that can lead to severe health complications if not diagnosed and treated in time. In this project, we propose a deep learning-based approach for the automatic detection of pneumonia from chest X-ray images using Convolutional Neural Networks (CNNs). The proposed system leverages the Xception architecture as a feature extractor combined with a custom classification head, data preprocessing, augmentation, and Grad-CAM visualization to localize the affected regions. The model was trained and evaluated on a publicly available chest X-ray dataset, with performance metrics including accuracy, precision, recall, and F1-score used to assess its effectiveness.The final implementation was done in a modular Python environment using Google Colab, allowing convenient integration of data pipelines, training workflows, and visualization techniques. This project demonstrates the potential of deep learning in automating pneumonia diagnosis and providing assistive tools for clinical decision-making
DOI: 10.5281/zenodo.15258374
title: Pneumonia Detector: Development of a Deep Learning-Based Pneumonia Detection System Using Chest X-ray Images

description: Pneumonia is a critical respiratory infection that can lead to severe health complications if not diagnosed and treated in time. In this project, we propose a deep learning-based approach for the automatic detection of pneumonia from chest X-ray images using Convolutional Neural Networks (CNNs). The proposed system leverages the Xception architecture as a feature extractor combined with a custom classification head, data preprocessing, augmentation, and Grad-CAM visualization to localize the affected regions. The model was trained and evaluated on a publicly available chest X-ray dataset, with performance metrics including accuracy, precision, recall, and F1-score used to assess its effectiveness.The final implementation was done in a modular Python environment using Google Colab, allowing convenient integration of data pipelines, training workflows, and visualization techniques. This project demonstrates the potential of deep learning in automating pneumonia diagnosis and providing assistive tools for clinical decision-making
DOI: 10.5066/p9yrtzr1
title: Surface Water and Porewater Chemistry and Nitrogen Biogeochemistry of Cell 3A, Prado Wetlands, Riverside, CA, USA (2018) (ver. 2.0, April 2025)

description: The data presented here was collected at Prado Wetlands in Riverside County, CA, USA. Physical water column parameters were collected using a multprobe sonde and includes date and time of sample collection, location (inlet, outlet), temperature (degrees Celsius), pH, specific conductivity (mircoSiemens per centimeter), and dissolved oxygen (milligrams per liter). An ISCO autosampler was utilized to remotely collect diel water samples at the inlet and outlet of the wetland. These samples were analyzed for dissolved metals (aluminum, arsenic, boron, barium, beryllium, bismuth, bromine, calcium, cadmium, cerium, cobalt, chromium, copper, dysprosium, erbium, europium, iron, gallium, gadolinium, holmium, potassium, lanthanum, lithium, lutetium, magnesium, manganese, molybdenum, sodium, neodymium, nickel, phosphorus, lead, praseodymium, rhodium, sulfur, antimony, selenium, silicon dioxide, samarium, strontium, terbium, tellurium, thorium, thallium, thulium, uranium, vanadium, yttrium, ytterbium, and zinc all reported in milligrams or micrograms per liter), chloride (micromolar), nitrite (micromolar), nitrate (micromolar), phosphate (micromolar), sulfate (micromolar), sodium (micromolar), ammonium (micromolar), potassium (micromolar), magnesium (micromolar), calcium (micromolar) alkalinity (milligrams per liter as bicarbonate), and dissolved methane (micromolar). Porewater samples were collected using an array of Henry samplers (configuration described in Duff et al. 1998). Samples were analyzed for nitrite (micromolar), nitrate (micromolar), sodium (micromolar), ammonium (micromolar), potassium (micromolar), magnesium (micromolar), and calcium (micromolar).
DOI: 10.15468/dl.9ehs32
title: Occurrence Download

description: A dataset containing 916 species occurrences available in GBIF matching the query:
{
 "and" : [
 "RecordedBy is one of (DOUGLAS, David Douglas)",
 "Year 1000-1908"
 ]
}

 The dataset includes 916 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008638-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.smwwgv
title: Occurrence Download

description: A dataset containing 1234 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Viburnum fordiae Hance)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1234 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008637-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ejtgj
title: Occurrence Download

description: A dataset containing 25 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Viburnum tashiroi Nakai)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 25 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008639-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28823159.v3
title: CODERData2.1.0

description: Cancer Organoid Data
DOI: 10.5281/zenodo.11061867
title: Confocal Lacunar Canalicular Network Segmentation Data

description: Overview

This dataset consists of confocal image stacks of the lacunar canalicular network (LCN) in cortical rat bone and their corresponding segmentations. For each sample, an image was acquired at two anatomical locations: the endosteum and in the mid-cortex of cortical bone.

Segmentation was performed using a semantic segmentation model with a U-net architecture (Ronneberger et al., 2017), followed by post-processing correction. The resulting segmentations were used for downstream analysis to characterize the LCN's structure and morphology.

Data Acquisition

The samples were imaged using a Leica SP8 White light Laser Confocal microscope with a 63x objective and a photomultiplier tube detector (PMT) using a zoom of 1. Images were acquired at the Cell Imaging Core at the University of Utah

Segmentation Labels

Each voxel in the segmentation files is labeled according to the following schema:




Label
Structure


0
Background


1
Canaliculi


2
Lacunae


3
Canals (blood vessels)




Image Resolution and Spacing

Each confocal image stack is a 3D volume with anisotropic voxel spacing. Voxel dimensions are provided below to allow for accurate morphological analysis:



In-plane resolution (X, Y): 0.18 µm × 0.18 µm

Axial resolution (Z): 0.3 µm


File Naming Convention

The filenames in this dataset have the following format:

[SampleID]-[Location]_[Suffix].tif

Where



SampleID: A unique identifier composed of a two-letter group code followed by a two-digit sample number (e.g., CT13).


 



Location: The anatomical region where the image was acquired.



endosteum - near the inner surface of the bone

midcortex - in the middle of the cortical cross-section of the bone




 



Suffix: 



img - for the raw confocal image

seg - for the corresponding segmentation mask
DOI: 10.5281/zenodo.11061868
title: Confocal Lacunar Canalicular Network Segmentation Data

description: Overview

This dataset consists of confocal image stacks of the lacunar canalicular network (LCN) in cortical rat bone and their corresponding segmentations. For each sample, an image was acquired at two anatomical locations: the endosteum and in the mid-cortex of cortical bone.

Segmentation was performed using a semantic segmentation model with a U-net architecture (Ronneberger et al., 2017), followed by post-processing correction. The resulting segmentations were used for downstream analysis to characterize the LCN's structure and morphology.

Data Acquisition

The samples were imaged using a Leica SP8 White light Laser Confocal microscope with a 63x objective and a photomultiplier tube detector (PMT) using a zoom of 1. Images were acquired at the Cell Imaging Core at the University of Utah

Segmentation Labels

Each voxel in the segmentation files is labeled according to the following schema:




Label
Structure


0
Background


1
Canaliculi


2
Lacunae


3
Canals (blood vessels)




Image Resolution and Spacing

Each confocal image stack is a 3D volume with anisotropic voxel spacing. Voxel dimensions are provided below to allow for accurate morphological analysis:



In-plane resolution (X, Y): 0.18 µm × 0.18 µm

Axial resolution (Z): 0.3 µm


File Naming Convention

The filenames in this dataset have the following format:

[SampleID]-[Location]_[Suffix].tif

Where



SampleID: A unique identifier composed of a two-letter group code followed by a two-digit sample number (e.g., CT13).


 



Location: The anatomical region where the image was acquired.



endosteum - near the inner surface of the bone

midcortex - in the middle of the cortical cross-section of the bone




 



Suffix: 



img - for the raw confocal image

seg - for the corresponding segmentation mask
DOI: 10.15468/dl.zsnt58
title: Occurrence Download

description: A dataset containing 667 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Viburnum formosanum (Hance) Hayata)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 667 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008641-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yvk4my
title: Occurrence Download

description: A dataset containing 2589 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Viburnum luzonicum Rolfe)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2589 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008642-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v3tph5
title: Occurrence Download

description: A dataset containing 1781 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence, Observation, Machine Observation)",
 "CoordinateUncertaintyInMeters 0.0-100.0",
 "Country is Switzerland",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Picea abies (L.) H.Karst., Anthyllis vulneraria L.)",
 "Year 1980-2025"
 ]
}

 The dataset includes 1781 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008644-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4j5wbj
title: Occurrence Download

description: A dataset containing 8186 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Viburnum erosum Thunb.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8186 records from 127 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008645-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15258407
title: Supplementary material for "The Impact of Digital Communities on Design Practice"
DOI: 10.5281/zenodo.15258408
title: Supplementary material for "The Impact of Digital Communities on Design Practice"
DOI: 10.15468/dl.w8fzwz
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Viburnum dalzielii W.W.Sm.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 44 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008646-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s8khve
title: Occurrence Download

description: A dataset containing 4483 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-48.07654 -22.86114,-47.15115 -22.86114,-47.15115 -21.98096,-48.07654 -21.98096,-48.07654 -22.86114))",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Myiodynastes maculatus (Statius Muller, 1776), Empidonomus varius (Vieillot, 1818))",
 "Year 2000-2025"
 ]
}

 The dataset includes 4483 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008647-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k5jet7
title: Occurrence Download

description: A dataset containing 103943 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is LACM Invertebrate Paleontology"
 ]
}

 The dataset includes 103943 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008643-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w5dvm4
title: Occurrence Download

description: A dataset containing 220 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Viburnum lancifolium P.S.Hsu)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 220 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008648-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.