cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27195236.v1
title: Complications of Silicone Oil as Vitreous Tamponade in Pars Plana Vitrectomy: A Mini Review

description: Silicone oil (SO) has been used as a vitreous tamponade for decades. Surgical complications such as glaucoma, cataract, or emulsification are well known. Despite that, increasing case reports of unexplained visual loss after SO removal is concerning because there is no treatment available. This article describes practical complications related to SO use and advantages/disadvantages for consideration regarding the choice of a vitreous substitute in practice. A literature review was conducted for publications related to silicone oil, heavy silicone oil, and vitreous substitutes. This article summarizes the SO chemical and physical properties including both SO and heavy SO and postoperative complications such as corneal decompensation, glaucoma, hypotony, cataract, optic neuropathy. Surgical complications such as over/underfilling, SO migration/emulsification, sticky SO and proliferative vitreoretinopathy (PVR) simulating epiretinal membranes formation, recurrent retinal detachments, SO unexplained visual loss, and permanent SO, are described. A brief overview on potential vitreous substitutes is presented. The decision to use SO as vitreous substitute in daily practice is based on the severity of retinal diseases and surgeon experience. SO potential complications must not be underestimated. The pursuit of novel safer vitreous substitutes is imperative.
DOI: 10.6084/m9.figshare.27939277
title: Targeting CCL5 Attenuates Fibrosis via Activation of PI3k/Akt Signaling Axis After Glaucoma Filtration Surgery

description: Glaucoma filtration surgery (GFS) stands as a paramount clinical intervention for glaucoma. Nonetheless, the prevalent cause of GFS failure is filtration bleb scarring, and the role of inflammation and immune response in contributing to fibrosis remains elusive. The study employed 30 female Sprague-Dawley rats (8 weeks old, 200-250 g) to assess the anti-scarring impact of the Chemokine (C-C motif) receptor 5 (CCR5)-Chemokine (C-C motif) ligand 5 (CCL5) antibody after GFS. Additionally, anti-fibrotic effects on HConFs were examined, creating an intra-operative inflammatory response using damaged-HConFs supernatant medium (DHSM). <i>In vitro</i> and <i>in vivo</i> validation aimed to elucidate the potential anti-fibrotic molecular mechanism of the CCR5-CCL5 antibody. The CCR5-CCL5 antibody effectively prolonged filtration bleb duration and enhanced the functionality of the filtered bleb. Improved postoperative intraocular pressure values (IOP) and morphological images were observed in the CCR5-CCL5 antibody-treated group. Histochemical staining and cellular experiments confirmed the antifibrotic function of the CCR5-CCL5 antibody. Notably, M2-type macrophage polarization was reduced in the CCR5-CCL5 antibody-treated model. CCL5-induced fibrosis in HConFs was mediated through the PI3K/Akt signaling pathway. Consistently, inhibition of PI3K/Akt significantly attenuated the profibrotic effects of CCR5-CCL5. Mechanistically, the CCL5 antibody exerts its antifibrotic effect by targeting CCR5 on HConFs, leading to the inhibition of the PI3K/Akt mechanism. This study unveils that CCR5-CCL5 promotes fibrosis in GFS through inflammatory stimulation of HConFs and enhanced activation of the PI3K/Akt signaling pathway. The findings suggest that intraoperative CCR5-CCL5 antibody treatment could serve as a cost-effective therapeutic agent or a useful adjuvant in preventing ocular bleb scar formation.
DOI: 10.6084/m9.figshare.27939277.v1
title: Targeting CCL5 Attenuates Fibrosis via Activation of PI3k/Akt Signaling Axis After Glaucoma Filtration Surgery

description: Glaucoma filtration surgery (GFS) stands as a paramount clinical intervention for glaucoma. Nonetheless, the prevalent cause of GFS failure is filtration bleb scarring, and the role of inflammation and immune response in contributing to fibrosis remains elusive. The study employed 30 female Sprague-Dawley rats (8 weeks old, 200-250 g) to assess the anti-scarring impact of the Chemokine (C-C motif) receptor 5 (CCR5)-Chemokine (C-C motif) ligand 5 (CCL5) antibody after GFS. Additionally, anti-fibrotic effects on HConFs were examined, creating an intra-operative inflammatory response using damaged-HConFs supernatant medium (DHSM). <i>In vitro</i> and <i>in vivo</i> validation aimed to elucidate the potential anti-fibrotic molecular mechanism of the CCR5-CCL5 antibody. The CCR5-CCL5 antibody effectively prolonged filtration bleb duration and enhanced the functionality of the filtered bleb. Improved postoperative intraocular pressure values (IOP) and morphological images were observed in the CCR5-CCL5 antibody-treated group. Histochemical staining and cellular experiments confirmed the antifibrotic function of the CCR5-CCL5 antibody. Notably, M2-type macrophage polarization was reduced in the CCR5-CCL5 antibody-treated model. CCL5-induced fibrosis in HConFs was mediated through the PI3K/Akt signaling pathway. Consistently, inhibition of PI3K/Akt significantly attenuated the profibrotic effects of CCR5-CCL5. Mechanistically, the CCL5 antibody exerts its antifibrotic effect by targeting CCR5 on HConFs, leading to the inhibition of the PI3K/Akt mechanism. This study unveils that CCR5-CCL5 promotes fibrosis in GFS through inflammatory stimulation of HConFs and enhanced activation of the PI3K/Akt signaling pathway. The findings suggest that intraoperative CCR5-CCL5 antibody treatment could serve as a cost-effective therapeutic agent or a useful adjuvant in preventing ocular bleb scar formation.
DOI: 10.15468/dl.svbacw
title: Occurrence Download

description: A dataset containing 696 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Trechaleoides biocellata (Mello-Leitão, 1926), Ornithoctonus aureotibialis von Wirth & Striffler, 2005, Omothymus violaceopes (Abraham, 1924), Nephilingis livida (Vinson, 1863), Mogrus logunovi Prószyński, 2000, Macrothele gigas Shimojana & Haupt, 1998, Lycosa poonaensis Tikader & Malhotra, 1980, Loxosceles spadicea Simon, 1907, Eucratoscelus constrictus (Gerstaecker, 1873), Cyriopagopus longipes (von Wirth & Striffler, 2005), Brachypelma smithi (F.O.Pickard-Cambridge, 1897), Zodarion nitidum (Audouin, 1826), Stenaelurillus modestus Wesołowska, 2014, Sicarius peruensis (Keyserling, 1880), Phlogiellus bundokalbo (Barrion & Litsinger, 1995), Oxyopes forcipiformis Xie & Kim, 1996, Linothele megatheloides Paz & Raven, 1990, Lampropelma nigerrimum Simon, 1892, Dolomedes okefinokensis Bishop, 1924, Ctenus hibernalis Hentz, 1844, Augacephalus ezendami (Gallon, 2001), Tliltocatl albopilosus (Valerio, 1980), Theraphosa apophysis (Tinter, 1991), Stromatopelma calceatum (Fabricius, 1793), Sericopelma upala Valerio, 1980)"
 ]
}

 The dataset includes 696 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018244-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18728/igb-fred-978.1
title: The scale-dependency in freshwater habitat regionalisation analyses

description: The data package includes the environmental data for the six drainage basins Sacramento (basin ID 1320241), Paraguaçu (basin ID 481455), Po (basin ID 1173421), Tana (basin ID 560810), Brahmani (basin ID 649217), and De Grey (basin ID 812813) to run the k-means cluster analyses conducted in the article:  Schürz, M., García Márquez, J., Domisch, S. (2025). "The scale-dependency in freshwater habitat regionalisation analyses". Ecohydrology. https://doi.org/10.1002/eco.70018.
DOI: 10.6084/m9.figshare.28605038
title: CellMemory-mHypoMap-benchmark data

description: CellMemory-mHypoMap-benchmark data
DOI: 10.15468/dl.f6fcjt
title: Occurrence Download

description: A dataset containing 304 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Taxus chinensis (Pilg.) Rehd.",
 "Year 1960-2025"
 ]
}

 The dataset includes 304 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018246-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/b3awxs
title: LA-ICP-MS REE analyses of igneous pyrochlore and monazite.tab

description: :unav
DOI: 10.57745/e0zpol
title: ICP-OES major element analyses of whole rock samples.tab

description: :unav
DOI: 10.57745/iqb5jp
title: READ ME.txt

description: :unav
DOI: 10.57745/qmthib
title: LA-ICP-MS trace-element analyses of aegirine and amphibole.tab

description: :unav
DOI: 10.57745/qoeht7
title: ICP-MS trace-element analyses of whole rock samples.tab

description: :unav
DOI: 10.57745/u2qoev
title: EPMA analyses of REE-Bearing minerals.tab

description: :unav
DOI: 10.57745/x7cgpc
title: EPMA analyses of pyrochlore.tab

description: :unav
DOI: 10.6084/m9.figshare.28631294
title: <b>Identification and functional analysis of endophytic bacteria Bacillus cereus in Sphagnum palustre +original data</b>

description: Endophytic bacteria in <i>S. palustre</i> have a growth-promoting effect on plants. In this study, the endophytic bacterium strain J11 in <i>S. palustre</i> was isolated and identified as <i>Bacillus cereus</i>, and its growth cycle, functional characteristics and effects on maize growth were analyzed. The results indicate that as <i>B. cereus, </i>the growth cycle of J11 consists four phases, andthe logarithmic phase lasts 2~24 hours, with the abilities of phosphorus solubilization, nitrogen fixation, IAA, protease, siderophore, and NH<sub>3</sub> production. The phosphorus solubilization ability of J11 ranges from 1.66±0.07 to 1.98±0.07 mg/L, and the IAA production varies from 1.51±0.07 to 8.67±0.16 mg/L. It has a growth-promoting effect on maize by increasing seed germination rate by 29.27%, plant height by 4.21%, leaf length by 17.12%, leaf width by 29.51%, above-ground fresh weight by 50.79%, below-ground fresh weight by 46.30%, and chlorophyll content by 56.81%. This study is the first to isolate and identify Bacillus cereus from <i>S. palustre</i> and explore its various potential growth-promoting functions and characteristics, providing materials and theoretical foundations for developing<i>B. cereus</i> as a biofertilizer.
DOI: 10.6084/m9.figshare.28631294.v1
title: <b>Identification and functional analysis of endophytic bacteria Bacillus cereus in Sphagnum palustre +original data</b>

description: Endophytic bacteria in <i>S. palustre</i> have a growth-promoting effect on plants. In this study, the endophytic bacterium strain J11 in <i>S. palustre</i> was isolated and identified as <i>Bacillus cereus</i>, and its growth cycle, functional characteristics and effects on maize growth were analyzed. The results indicate that as <i>B. cereus, </i>the growth cycle of J11 consists four phases, andthe logarithmic phase lasts 2~24 hours, with the abilities of phosphorus solubilization, nitrogen fixation, IAA, protease, siderophore, and NH<sub>3</sub> production. The phosphorus solubilization ability of J11 ranges from 1.66±0.07 to 1.98±0.07 mg/L, and the IAA production varies from 1.51±0.07 to 8.67±0.16 mg/L. It has a growth-promoting effect on maize by increasing seed germination rate by 29.27%, plant height by 4.21%, leaf length by 17.12%, leaf width by 29.51%, above-ground fresh weight by 50.79%, below-ground fresh weight by 46.30%, and chlorophyll content by 56.81%. This study is the first to isolate and identify Bacillus cereus from <i>S. palustre</i> and explore its various potential growth-promoting functions and characteristics, providing materials and theoretical foundations for developing<i>B. cereus</i> as a biofertilizer.
DOI: 10.18150/ud2hzm
title: Analysis of tribological wear of metallic membranes after the hydrogenation process

description: The ZIP archive contains compressed raw data from the process of hydrogen charging of metallic membranes, results of tribological tests, and tests using scanning and transmission electron microscopy method. The collection contains data sets based on which the photos were selected and the graphs presented in the publication were developed:Photo no. 7- A1_1_Poteciostatic: Volt-amperometric curves of hydrogen charging of metallic membranes, supported by the EC-lab program.Photo no. 12- A1_2_SEM_S: Photos of the membrane surface after hydrogen charging, taken using a scanning electron microscope.Photo 4-5- A1_3_SEM_CS: Photos of the cross-section of the membranes after hydrogen charging, taken using a scanning electron microscope.Photo no. 9- A1_4_Tribology: Results of tribological tests of the membranes after the hydrogen charging process.Photo no. 12- A1_5_Profilometr: Results of profilometric tests of the membrane surface after the hydrogen charging process.Photo 17-19- A1_6_TEM: Photos of the cross-section of the membranes after hydrogen charging, taken using a transmission electron microscopes.
DOI: 10.15468/dl.baydjr
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Porpax jerdoniana (Wight) Rolfe"
 ]
}

 The dataset includes 54 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018247-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15012727
title: Machine learning surrogate models of many-body dispersion interactions in polymer melts [Dataset]

description: Datasets used for the paper: Machine learning surrogate models of many-body dispersion interactions in polymer melts
DOI: 10.5281/zenodo.15012728
title: Machine learning surrogate models of many-body dispersion interactions in polymer melts [Dataset]

description: Datasets used for the paper: Machine learning surrogate models of many-body dispersion interactions in polymer melts
DOI: 10.6084/m9.figshare.28631465
title: S1 File.

description: Data used for research.
DOI: 10.15468/dl.z5nnub
title: Occurrence Download

description: A dataset containing 2783 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Abundances and biological traits of the juveniles trout sampled in the survey of trout abundance Indices (VIGITRUITE®) in the Oir river (France)"
 ]
}

 The dataset includes 2783 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018248-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nc6c4w
title: Occurrence Download

description: A dataset containing 430 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arhopalus foveicollis (Haldeman, 1847)"
 ]
}

 The dataset includes 430 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018249-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1125197.10fu
title: SH1125197.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1125199.10fu
title: SH1125199.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1125204.10fu
title: SH1125204.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1125208.10fu
title: SH1125208.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1125210.10fu
title: SH1125210.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1125211.10fu
title: SH1125211.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1125213.10fu
title: SH1125213.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.