cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4722746
title: Detection of Sub-Micro- and Nanoplastic Particles on Gold Nanoparticle-Based Substrates by Surface-Enhanced Raman Scattering (SERS) Spectroscopy

description: These datasets are used to produce the figures/tables published in our Nanomaterials article entitled: Detection of Sub-Micro- and Nanoplastic Particles on Gold Nanoparticle-Based Substrates by Surface-Enhanced Raman Scattering (SERS) Spectroscopy by Jessica Caldwell, Patricia Taladriz-Blanco, Barbara Rothen-Rutishauser, and Alke Petri-Fink <br> <strong>Abstract: </strong>Small plastic particles such as micro- (&lt;5 mm), sub-micro- (1 µm–100 nm) and nanoplastics (&lt;100 nm) are known to be ubiquitous within our surrounding environment. However, to date relatively few methods exist for the reliable detection of nanoplastic particles in relevant sample matrices such as foods or environmental samples. This lack of relevant data is likely a result of key limitations (e.g., resolution and/or scattering efficiency) for common analytical techniques such as Fourier transform infrared or Raman spectroscopy. This study aims to address this knowledge gap in the field through the creation of surface enhanced Raman scattering spectroscopy substrates utilizing spherical gold nanoparticles with 14 nm and 46 nm diameters to improve the scattering signal obtained during Raman spectroscopy measurements. The substrates are then used to analyze polystyrene particles with sizes of 161 nm or 33 nm and poly(ethylene terephthalate) particles with an average size of 62 nm. Through this technique, plastic particles could be detected at concentrations as low as 10 µg/mL, and analytical enhancement factors of up to 446 were achieved.
DOI: 10.5517/ccdc.csd.cc23404f
title: CCDC 1940263: Experimental Crystal Structure Determination

description: Related Article: Xiaofei Zhu, Haitao Han, Xiaolei Li, Shentang Wang, Wuping Liao|2020|Inorg.Chem.Commun.|113|107801|doi:10.1016/j.inoche.2020.107801
DOI: 10.5281/zenodo.4722817
title: Spatial coordination - NIOO Encounternet great tit data 2016

description: To study foraging coordination over parental provisioning, we collected radio-tracking data of great tit (<em>Parus major</em>) pairs using <em>Encounternet. </em>This dataset contains the raw radio-tracking data (logs and array information), the triangulated locations of male and female parents, and the EMD (earth mover's distance) analyses to investigate spatio-temporal coordination between the parents.
DOI: 10.5281/zenodo.4722816
title: Spatial coordination - NIOO Encounternet great tit data 2016

description: To study foraging coordination over parental provisioning, we collected radio-tracking data of great tit (<em>Parus major</em>) pairs using <em>Encounternet. </em>This dataset contains the raw radio-tracking data (logs and array information), the triangulated locations of male and female parents, and the EMD (earth mover's distance) analyses to investigate spatio-temporal coordination between the parents.
DOI: 10.5281/zenodo.4722613
title: Data for MS: The Speed of Allosteric Signaling Within a Single-Domain Protein

description: Data for MS: The Speed of Allosteric Signaling Within a Single-Domain Protein
DOI: 10.5281/zenodo.4722612
title: Data for MS: The Speed of Allosteric Signaling Within a Single-Domain Protein

description: Data for MS: The Speed of Allosteric Signaling Within a Single-Domain Protein
DOI: 10.5522/04/13253906
title: Healthcare use by people who use illicit opioids (HUPIO): development of a cohort based on electronic primary care records in England (extended data)

description: This dataset includes:<br><br>1. Search terms used to identify codes that may represent a history of illicit opioid use 2. Codelist for identifying people with a history of illicit opioid use 3. Age- and sex-distribution of patients by product and clinical codes 4. Number of patients currently in the cohort<br>5. Age of patients at cohort entry<br>6. Internal validation based on hospital admissions for opioid dependence
DOI: 10.5522/04/13253906.v5
title: Healthcare use by people who use illicit opioids (HUPIO): development of a cohort based on electronic primary care records in England (extended data)

description: This dataset includes:<br><br>1. Search terms used to identify codes that may represent a history of illicit opioid use 2. Codelist for identifying people with a history of illicit opioid use 3. Age- and sex-distribution of patients by product and clinical codes 4. Number of patients currently in the cohort<br>5. Age of patients at cohort entry<br>6. Internal validation based on hospital admissions for opioid dependence
DOI: 10.5281/zenodo.4722683
title: Modelling of 802.11 4-Way Handshake Attacks and Analysis of Security Properties (Dataset)

description: This dataset repository is part of the research paper "Modelling of 802.11 4-Way Handshake Attacks and Analysis of Security Properties". The IEEE 802.11 standard defines a 4-way handshake between a supplicant and an authenticator for secure communication. Many attacks such as KRACK, cipher downgrades, and key recovery attacks have been recently discovered against it. These attacks raise the question as to whether the implementation violates one of the required security properties or whether the security properties are insufficient. To the best of our knowledge, this is the first work that shows how to answer this question using formal methods. We model and analyze a variety of these attacks using the Tamarin prover against the security properties mandated by the standard for the 4-way handshake. This lets us see which security properties are violated. We find that our Tamarin models vulnerable to the KRACK attacks do not violate any of the standard’s security properties, indicating that the properties, as specified by the standard, are insufficient. We propose an additional security property and show that it is violated by systems vulnerable to KRACK attacks and that enforcing this property is successful in stopping them. We demonstrate how to use Tamarin to automatically test the adequacy of a set of security properties against attacks, and that the suggested mitigations make 802.11 secure against these attacks.
DOI: 10.5281/zenodo.4722682
title: Modelling of 802.11 4-Way Handshake Attacks and Analysis of Security Properties (Dataset)

description: This dataset repository is part of the research paper "Modelling of 802.11 4-Way Handshake Attacks and Analysis of Security Properties". The IEEE 802.11 standard defines a 4-way handshake between a supplicant and an authenticator for secure communication. Many attacks such as KRACK, cipher downgrades, and key recovery attacks have been recently discovered against it. These attacks raise the question as to whether the implementation violates one of the required security properties or whether the security properties are insufficient. To the best of our knowledge, this is the first work that shows how to answer this question using formal methods. We model and analyze a variety of these attacks using the Tamarin prover against the security properties mandated by the standard for the 4-way handshake. This lets us see which security properties are violated. We find that our Tamarin models vulnerable to the KRACK attacks do not violate any of the standard’s security properties, indicating that the properties, as specified by the standard, are insufficient. We propose an additional security property and show that it is violated by systems vulnerable to KRACK attacks and that enforcing this property is successful in stopping them. We demonstrate how to use Tamarin to automatically test the adequacy of a set of security properties against attacks, and that the suggested mitigations make 802.11 secure against these attacks.
DOI: 10.5281/zenodo.4722875
title: Synthetic OES spectra for C2 (Swan system, close to v′=0→v′′=0). Supporting Data for "Processing slightly resolved ro-vibrational spectra... machine learning approach for plasma thermometry" (arXiv: 2011.12647 and others)

description: Data used in the paper "Processing slightly resolved ro-vibrational spectra during chemical vapor deposition of carbon materials: machine learning approach for plasma thermometry" (arXiv:2011.12647) and those that will be published soon. Contents: "40channels.pkl" - main dataset - OES synthetic spectra for C2 Swan band, which can be used to train AI (supervised learning) "C2 OES synthetic spectra for Zenodo.ipynb.ipynd" simple example of using dataset by Jupyter Notebook for python (see https://jupyter.org/) "C2 OES synthetic spectra for Zenodo.pdf" is printed version of "C2 OES synthetic spectra for Zenodo.ipynb.ipynd".
DOI: 10.5281/zenodo.4722874
title: Synthetic OES spectra for C2 (Swan system, close to v′=0→v′′=0). Supporting Data for "Processing slightly resolved ro-vibrational spectra... machine learning approach for plasma thermometry" (arXiv: 2011.12647 and others)

description: Data used in the paper "Processing slightly resolved ro-vibrational spectra during chemical vapor deposition of carbon materials: machine learning approach for plasma thermometry" (arXiv:2011.12647) and those that will be published soon. Contents: "40channels.pkl" - main dataset - OES synthetic spectra for C2 Swan band, which can be used to train AI (supervised learning) "C2 OES synthetic spectra for Zenodo.ipynb.ipynd" simple example of using dataset by Jupyter Notebook for python (see https://jupyter.org/) "C2 OES synthetic spectra for Zenodo.pdf" is printed version of "C2 OES synthetic spectra for Zenodo.ipynb.ipynd".
DOI: 10.5522/04/14484084
title: The 'Pritchard Trap' survey method for crayfish - data from deployment time experiment and comparison with Triple Drawdown (TDD)

description: The 'Pritchard Trap' (PT) is a novel quantitative survey method for crayfish. Here, we trialled the PT in rocky headwater streams in North Yorkshire, England along an invasion gradient for signal crayfish from well-established sites to mixed populations of signal crayfish and native white-clawed crayfish. A deployment time experiment was undertaken to determine the minimum deployment time. Data for deployment intervals of 1, 2, 4, 7 and 10 days are presented. The PTs were also compared to the Triple Drawdown (TDD) technique to allow for a robust evaluation of PT sampling accuracy in representing crayfish densities and population structure. Data from TDDs and PTs are presented.
DOI: 10.5522/04/14484084.v1
title: The 'Pritchard Trap' survey method for crayfish - data from deployment time experiment and comparison with Triple Drawdown (TDD)

description: The 'Pritchard Trap' (PT) is a novel quantitative survey method for crayfish. Here, we trialled the PT in rocky headwater streams in North Yorkshire, England along an invasion gradient for signal crayfish from well-established sites to mixed populations of signal crayfish and native white-clawed crayfish. A deployment time experiment was undertaken to determine the minimum deployment time. Data for deployment intervals of 1, 2, 4, 7 and 10 days are presented. The PTs were also compared to the Triple Drawdown (TDD) technique to allow for a robust evaluation of PT sampling accuracy in representing crayfish densities and population structure. Data from TDDs and PTs are presented.
DOI: 10.6084/m9.figshare.14493798
title: Cuckoo catfish density effects

description: data table and R script
DOI: 10.6084/m9.figshare.14493798.v1
title: Cuckoo catfish density effects

description: data table and R script
DOI: 10.5281/zenodo.4722893
title: hal-03079617 raw data

description: Raw data of the preprint hal-03079617 "Dynamics of <em>Fucus serratus</em> thallus photosynthesis and community primary production during emersion across seasons: canopy dampening and biochemical acclimation".
DOI: 10.15161/oar.it/73748
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.
DOI: 10.34808/j6v6-dg64
title: The scanning electron microscopy (SEM) studies of low voltage copper cables

description: The dataset contains the scanning electron microscopy (SEM) images of the low voltage copper cables, which were studied in the article discussing the regulatory requirements for checking the electrical resistance of such cables. The cables were cut and studies in cross-section. The full results were published in: 

Olesz, M., & Ryl, J. (2013). BADANIE REZYSTANCJI ELEKTRYCZNEJ ŻYŁ WYBRANYCH PRZEWODÓW. Zeszyty Naukowe Wydziału Elektrotechniki I Automatyki Politechniki Gdańskiej, 35, 35-38.

 
The VP-SEM Hitachi S-3400N microscope was utilized, studying the cross-section topography using secondary electron mode, at 20 kV accelerating voltage. Magnifications used: 50 - 10000x.
DOI: 10.34808/28cc-kn81
title: Ellipsometric monitoring during the polarization studies of Mg corrosion in alkaline environment

description: The dataset contains the ellipsometric results from the Mg polarization studies aiming at understanding the Mg(OH)2 passive layer formation mechanism and conditions. The single-wavelength ellipsometer ELX-02C from Dr Riss GmbH was utilized, operating He-Ne laser at 632.8 nm. The polarization conditions for the experiment are depicted in the related resource with cyclic voltammetry analysis. The measurements were carried out at Mg (99.99%) in NaOH solution at pH = 10, 11 and 12.
DOI: 10.34808/tggg-4764
title: Cyclic polarization studies of Mg corrosion in alkaline environment

description: The dataset contains the cyclic polarization studies of Mg (99.99%) in NaOH electrolyte at different pH values: 10, 11 and 12 aiming at understanding of Mg(OH)2 passive layer formation mechanism and conditions. The electrochemical studies were carried out in a three electrode setup, with Pt mesh as the counter electrode and Ag|AgCl as the reference electrode. The studies were carried out at Gamry Reference 600 potentiostat / Gamry Instruments.
DOI: 10.5519/qd.2nb29l2z
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (37 records)
DOI: 10.5286/isis.e.rb1900109-1
title: Commissioning of electrochemical cell for neutron scattering: In-situ study of Li vs mesoporus carbon batteries.

description: There is an urgent need for to provide energy storage solutions in order for the world to switch form it's reliance on fossil fuels to renewable energy. This will allow us to store energy to provide energy at times when there is no wind to turn a wind turbine or no sun to illuminate a solar cell.Lithium-ion batteries provides an electrochemical solution to energy storage which, due to the high energy density is popular in portable applications such as in mobile phones, laptops and electric vehicles. The electrochemical cell to be commissioned in this proposal will allow for the study of many energy materials operando. In this experiment we have chosen to study a lithium ion battery. The range of lengthscales available using our electrochemical cell in combination with NIMROD will allow for us to elucidate the much speculated upon mechanisms of charge storage in the cell.
DOI: 10.14284/474
title: Aggregated counts of Gavia spp. from aerial surveys performed during the spring season between 2001 and 2018 in the German North Sea

description: Gavia spp. count data acquired from aerial surveys performed between 2001 and 2018 during the spring season on the German North Sea.
description: Data was provided by: BioConsult SH GmbH & Co. KG, IBL Umweltplanung GmbH, Institut für angewandte Ökosystemforschung GmbH, and the Federal Agency for Nature Conservation (BfN). For each year, spring (from 1st March until 15th May), aerial data from different sources was aggregated by mesh node (5km resolution) and type of survey: Digital (HiDef, APEM, DAISI) or conventional. Conventional aerial data is already corrected for distance sampling. Data is stored as a "Large SpatialPointsDataFrame" in rds format to be opened using R software. The ZIP file contains two rds files: 1. diver_counts_2001_2018_spring.rds: the main dataset with the aggregated bird counts. 2. mesh_5km.rds: the spatial mesh used to aggregate the counts. Constrained refined Delaunay triangulation spatial mesh a maximum distance between nodes of 5km covering the German North Sea; to be used as support file to construct the model. Code: readRDS(file="mesh_5km.rds"). Coordinate system: UTM32N (EPSG:32632) "+init=epsg:32632 +proj=utm +zone=32+datum=WGS84 +units=km +no_defs + ellps=WGS84 +towgs84=0,0,0"
DOI: 10.5281/zenodo.4722960
title: Plumed files for 'Molecular simulations capture the transient exposure of a buried phosphorylation site in the autoinhibited state of a protein'

description: Plumed files and hills files employed in 'Molecular simulations capture the transient exposure of a buried phosphorylation site in the autoinhibited state of a protein'.
DOI: 10.5519/qd.f9pghlq8
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2 records)
DOI: 10.5281/zenodo.3336036
title: LILACS and IBECS annotated abstracts in Spanish

description: Annotated articles from IBECS and LILACS, where annotated means that MeSH/DeCS terms have been assigned to the articles by the human curators in IBECS and LILACS. This resource is promoted by the Plan de Impulso de las Tecnologías del Lenguaje de la Agenda Digital (Plan TL).
DOI: 10.5281/zenodo.3336032
title: LILACS and IBECS annotated abstracts in Spanish

description: Annotated articles from IBECS and LILACS, where annotated means that MeSH/DeCS terms have been assigned to the articles by the human curators in IBECS and LILACS. This resource is promoted by the Plan de Impulso de las Tecnologías del Lenguaje de la Agenda Digital (Plan TL).
DOI: 10.5281/zenodo.4722963
title: Butterflies of Berhampur city

description: Datasets of butterfly diversity of Berhampur and site-wise comparison using various parametres.
DOI: 10.5281/zenodo.4722962
title: Butterflies of Berhampur city

description: Datasets of butterfly diversity of Berhampur and site-wise comparison using various parametres.
DOI: 10.5281/zenodo.4066671
title: Rehabilitation Outcomes of Patients With Severe Disability Poststroke

description: <strong>Objective:</strong> To characterize rehabilitation outcomes of patients with severe poststroke motor impairment (MI) and develop a predictive model for treatment failure. <strong>Design</strong>: Retrospective cohort study. Correlates of treatment failure, defined as the persistence of severe MI after rehabilitation, were identified using logistic regression analysis. Then, an integer-based scoring rule was developed from the logistic model. <strong>Setting</strong>: Three specialized inpatient rehabilitation facilities. <strong>Participants</strong>: Patients (N=1265) classified as case-mix groups (CMGs) 0108, 0109, and 0110 of the Medicare classification system. <strong>Interventions</strong>: Not applicable. <strong>Main outcome measure</strong>: Change in the severity of MI, as assessed by the FIM, from admission to discharge. <strong>Results</strong>: Median FIM-motor (FIM-M) score increased from 17 (interquartile range [IQR] 14-23) to 38 (IQR, 25-55) points. Median proportional recovery, as expressed by FIM-M effectiveness, was 26% (IQR, 12-47). Median FIM-M change was 18 (IQR, 9-34) points. About 38.5% patients achieved the minimal clinically important difference. Eighteen point six percent and 32.0% of the patients recovered to a stage of either mild (FIM-M ≥62) or moderate (FIM-M 38-61) MI, respectively. All between-CMG differences were statistically significant. Outcomes have also been analyzed according to classification systems used in Australia and Canada. The scoring rule had an area under the curve of 0.833 (95% confidence interval, 0.808-0.858). Decision curve analysis displayed large net benefit of using the risk score compared with the treat all strategy. <strong>Conclusions</strong>: This study provides a snapshot of rehabilitation outcomes in a large cohort of patients with severe poststroke MI, thus filling a gap in knowledge. The scoring rule accurately identified the patients at risk for treatment failure.
DOI: 10.5281/zenodo.4066670
title: Rehabilitation Outcomes of Patients With Severe Disability Poststroke

description: <strong>Objective:</strong> To characterize rehabilitation outcomes of patients with severe poststroke motor impairment (MI) and develop a predictive model for treatment failure. <strong>Design</strong>: Retrospective cohort study. Correlates of treatment failure, defined as the persistence of severe MI after rehabilitation, were identified using logistic regression analysis. Then, an integer-based scoring rule was developed from the logistic model. <strong>Setting</strong>: Three specialized inpatient rehabilitation facilities. <strong>Participants</strong>: Patients (N=1265) classified as case-mix groups (CMGs) 0108, 0109, and 0110 of the Medicare classification system. <strong>Interventions</strong>: Not applicable. <strong>Main outcome measure</strong>: Change in the severity of MI, as assessed by the FIM, from admission to discharge. <strong>Results</strong>: Median FIM-motor (FIM-M) score increased from 17 (interquartile range [IQR] 14-23) to 38 (IQR, 25-55) points. Median proportional recovery, as expressed by FIM-M effectiveness, was 26% (IQR, 12-47). Median FIM-M change was 18 (IQR, 9-34) points. About 38.5% patients achieved the minimal clinically important difference. Eighteen point six percent and 32.0% of the patients recovered to a stage of either mild (FIM-M ≥62) or moderate (FIM-M 38-61) MI, respectively. All between-CMG differences were statistically significant. Outcomes have also been analyzed according to classification systems used in Australia and Canada. The scoring rule had an area under the curve of 0.833 (95% confidence interval, 0.808-0.858). Decision curve analysis displayed large net benefit of using the risk score compared with the treat all strategy. <strong>Conclusions</strong>: This study provides a snapshot of rehabilitation outcomes in a large cohort of patients with severe poststroke MI, thus filling a gap in knowledge. The scoring rule accurately identified the patients at risk for treatment failure.
DOI: 10.5281/zenodo.4722988
title: Mock data for an OTU calling exercise

description: This is a mock dataset for a variant calling exercise.
DOI: 10.5281/zenodo.4722987
title: Mock data for an OTU calling exercise

description: This is a mock dataset for a variant calling exercise.
DOI: 10.6084/m9.figshare.14485155
title: Basic psychological needs and climate relevant self-protection

description: These are two sets of data that I collected in 2018 and 2019 in Germany. They assess basic psychological need satisfaction, various indicators of pro-environmentalism, and self-protective strategies people commonly use when facing the threat of climate change. The corresponding study (Wullenkord, submitted) investigated relations between basic psychological need satisfaction and climate-relevant defensive self-protection.<br>
DOI: 10.6084/m9.figshare.14483394
title: Microbial culture underestimates lung pathogen detection and surveillance in cystic fibrosis

description: Respiratory samples taken from 20 paediatric and 20 adult CF patients over a period of 3 years retrospectively analysed. This allowed a comprehensive comparison the diagnostic microbiological culture with targeted quantitative polymerase chain reaction (QPCR) for detection of two emblematic pathogens of CF, <i>Staphylococcus aureus</i> and <i>Pseudomonas aeruginosa</i>, which are understood to be readily culturable pathogens.