cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.rn43u7
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "Geometry POLYGON((-114.89665 32.58117,-114.92346 32.44414,-112.53932 31.68088,-112.54524 31.82896,-114.89665 32.58117))",
 "TaxonKey is Olneya tesota A.Gray"
 ]
}

 The dataset includes 41 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000801-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x98dye
title: Occurrence Download

description: A dataset containing 1225 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elasmopalpus lignosella Zeller, 1848"
 ]
}

 The dataset includes 1225 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000800-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15001207
title: USING ENGLISH LANGUAGE LEARNING GAMES TO DEVELOP SPEAKING SKILLS IN EFL CLASSROOM OF ELEMENTARY SCHOOL.
DOI: 10.5281/zenodo.15001208
title: USING ENGLISH LANGUAGE LEARNING GAMES TO DEVELOP SPEAKING SKILLS IN EFL CLASSROOM OF ELEMENTARY SCHOOL.
DOI: 10.15468/dl.6zuqx4
title: Occurrence Download

description: A dataset containing 216 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((-55.91081 51.61275,-54.86844 53.32158,-59.83803 56.36707,-71.1971 54.46251,-71.77796 46.78801,-64.74309 47.75143,-61.0643 48.48389,-55.91081 51.61275))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Salmo salar Linnaeus, 1758"
 ]
}

 The dataset includes 216 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000803-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14933509
title: Spreadsheet Template for Trophic guild data for microbial eukaryotes
DOI: 10.5281/zenodo.14933508
title: Spreadsheet Template for Trophic guild data for microbial eukaryotes
DOI: 10.5281/zenodo.15001081
title: Spreadsheet Template for Trophic guild data for microbial eukaryotes
DOI: 10.5281/zenodo.15001235
title: Spreadsheet Template for Trophic guild data for microbial eukaryotes
DOI: 10.5281/zenodo.14953102
title: Impact of Magnesium and Manganese Ions on the Structural and Catalytic Properties of Human Polymerase Gamma

description: DNA polymerases are essential enzymes responsible for accurate genome replication and repair, with divalent metal cofactors playing a crucial role in their catalytic function. Polymerase gamma (Pol γ) is the primary DNA polymerase in mitochondria, ensuring the faithful replication of mitochondrial DNA. The choice of metal cofactor, typically magnesium (Mg²⁺) or manganese (Mn²⁺), influences its structural stability, enzymatic activity, and fidelity. In this study, we employed molecular dynamics (MD) simulations and hybrid quantum mechanics/molecular mechanics (QM/MM) calculations to investigate how Mg²⁺ and Mn²⁺ affect the flexibility, active site stabilization, and catalytic efficiency of Pol γ. It is seen that Mn²⁺ increases overall protein flexibility, whereas Mg²⁺ provides greater active site stabilization. Intermolecular interaction analysis of individual residues are consistent with experimental mutagesis reports, and highlight the importance of specific residues, many of which are evolutionarily conserved, and some are involved in pathogenic mutations. Despite this, Mn²⁺ enhances catalytic efficiency, exhibiting a higher reaction energy (3.65 kcal/mol vs. 1.61 kcal/mol for Mg²⁺) and a lower activation barrier. Inter-molecular interaction analysis reveals that Mn²⁺ provides a larger stabilization of the transition state and product complex, favoring reaction progression. Investigation of the effects of electric field in the active site suggest that the O3’ atom on the DNA primer base experiences a larger polarization in the system with Mn2+ ions when compared to Mg2+, with dipole directions consistent with the catalytic reaction progress.  Our findings highlight a trade-off between structural stability and catalytic efficiency, providing insights into the role of metal ions in mitochondrial polymerase function and their implications for mutagenesis and mitochondrial disorders.
DOI: 10.5281/zenodo.14953103
title: Impact of Magnesium and Manganese Ions on the Structural and Catalytic Properties of Human Polymerase Gamma

description: DNA polymerases are essential enzymes responsible for accurate genome replication and repair, with divalent metal cofactors playing a crucial role in their catalytic function. Polymerase gamma (Pol γ) is the primary DNA polymerase in mitochondria, ensuring the faithful replication of mitochondrial DNA. The choice of metal cofactor, typically magnesium (Mg²⁺) or manganese (Mn²⁺), influences its structural stability, enzymatic activity, and fidelity. In this study, we employed molecular dynamics (MD) simulations and hybrid quantum mechanics/molecular mechanics (QM/MM) calculations to investigate how Mg²⁺ and Mn²⁺ affect the flexibility, active site stabilization, and catalytic efficiency of Pol γ. It is seen that Mn²⁺ increases overall protein flexibility, whereas Mg²⁺ provides greater active site stabilization. Intermolecular interaction analysis of individual residues are consistent with experimental mutagesis reports, and highlight the importance of specific residues, many of which are evolutionarily conserved, and some are involved in pathogenic mutations. Despite this, Mn²⁺ enhances catalytic efficiency, exhibiting a higher reaction energy (3.65 kcal/mol vs. 1.61 kcal/mol for Mg²⁺) and a lower activation barrier. Inter-molecular interaction analysis reveals that Mn²⁺ provides a larger stabilization of the transition state and product complex, favoring reaction progression. Investigation of the effects of electric field in the active site suggest that the O3’ atom on the DNA primer base experiences a larger polarization in the system with Mn2+ ions when compared to Mg2+, with dipole directions consistent with the catalytic reaction progress.  Our findings highlight a trade-off between structural stability and catalytic efficiency, providing insights into the role of metal ions in mitochondrial polymerase function and their implications for mutagenesis and mitochondrial disorders.
DOI: 10.15468/dl.j8yqfd
title: Occurrence Download

description: A dataset containing 96517 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 {
 "not" : {
 "PhylumKey" : [
 "is Chordata"
 ]
 }
 },
 "ClassKey is one of (Thaliacea, Ascidiacea, Appendicularia, Leptocardii)"
 ]
 },
 "KingdomKey is Animalia",
 "DatasetKey is one of (University of Texas, Biodiversity Center, Entomology Collection (UTIC))"
 ]
}

 The dataset includes 96517 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000796-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15161/oar.it/212375
title: Carta Geologica d'Italia alla scala 1:50.000, F. 438 Bari

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.15161/oar.it/212374
title: Carta Geologica d'Italia alla scala 1:50.000, F. 438 Bari

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.5281/zenodo.15001243
title: LINGVOCOGNITIVE FEARURES OF RELIGIONIMIK UNITS IN ENGLISH LANGUAGE
DOI: 10.5281/zenodo.15001244
title: LINGVOCOGNITIVE FEARURES OF RELIGIONIMIK UNITS IN ENGLISH LANGUAGE
DOI: 10.15468/dl.g9ydd4
title: Occurrence Download

description: A dataset containing 2927 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ocypus brunnipes (Fabricius, 1781)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2927 records from 147 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000804-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6cvwxz
title: Occurrence Download

description: A dataset containing 1664 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((1.05084 42.62477,1.09552 42.62477,1.09552 42.66172,1.05084 42.66172,1.05084 42.62477))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1664 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000808-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nusz6y
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "Geometry POLYGON((-114.77315 32.52475,-114.8094 32.42636,-112.61896 31.75835,-112.59825 31.84639,-114.77315 32.52475))",
 "TaxonKey is Peniocereus greggii (Engelm.) Britton & Rose"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000806-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.krcu7r
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Chile",
 "TaxonKey is Lithrea caustica Hook. & Arn."
 ]
}

 The dataset includes 55 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000807-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dhc7gv
title: Occurrence Download

description: A dataset listing the 4 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elasmopalpus lignosella Zeller, 1848"
 ]
}

 The dataset's 4 records were derived from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000802-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/8c9eb1f73f1303c758b6731ebf436414
title: Dissolved organic matter characterization for seasonal synoptic sampling of 100 urban streams in Miami, Florida (USA) from 2021-2022

description: This dataset contains dissolved organic matter (DOM) characteristics from surface water samples collected at 100 urban stream and canal locations in the greater Miami, Florida metropolitan area. Samples were collected five times across different seasons to capture spatial and seasonal variation in DOC concentration. These events include the wet seasons of 2021 and 2022, as well as the dry season of 2022, specifically: Summer 2021 (Wet; July 8 to July 27), Fall 2021 (Wet; September 27 to October 7), Winter 2022 (Dry; January 3 to January 13), Spring 2022 (Dry; April 7 to April 23), and Summer 2022 (Wet; June 1 to June 13). Fluorescent optical properties were measured on filtered water samples to understand the chemical composition of DOM. Excitation-Emission Matrices (EEMs) were measured using a Horiba Aqualog spectrometer. DOM characteristics were quantified using both standard fluorescence and absorbance metrics as well as through parallel factor (PARAFAC) analysis. These data were collected as part of the Carbon in Urban Rivers Biogeochemistry (CURB) Project. Detailed field data and site data are published separately and can be linked using the “curbid” and “synoptic_event” columns in each dataset.
DOI: 10.5281/zenodo.15001257
title: 112
DOI: 10.5281/zenodo.15001258
title: 112
DOI: 10.15468/dl.umsgg8
title: Occurrence Download

description: A dataset containing 1460 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Chile",
 "TaxonKey is Vachellia caven (Molina) Seigler & Ebinger"
 ]
}

 The dataset includes 1460 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000809-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/e5c0e15e0c96eaaf9123e13727dbff4a
title: Field data for seasonal synoptic sampling of 100 urban streams in Miami, Florida (USA), 2021-2022

description: This dataset contains field measurements taken during water sampling from 100 urban stream locations in the greater Miami, Florida metropolitan area. Field collection took place during five synoptic sampling events: Summer 2021 (Wet; July 8 to July 27), Fall 2021 (Wet; September 27 to October 7), Winter 2022 (Dry; January 3 to January 13), Spring 2022 (Dry; April 7 to April 23), and Summer 2022 (Wet; June 1 to June 13) to capture spatial and seasonal variation in stream conditions (specific conductivity, water temperature, dissolved oxygen, pH). Filtered stream samples were analyzed for dissolved organic carbon concentration and characteristics, available in a separate dataset. These data were collected as part of the Carbon in Urban Rivers Biogeochemistry (CURB) Project. Detailed field data and site data are published separately and can be linked using the “curbid” and “synoptic_event” columns in each dataset.
DOI: 10.6084/m9.figshare.28566584
title: Data of Growth and Lipid Productivity of Nannochloropsis oculata

description: The research of Artificial Biofilm of <i>Nannochloropsis oculata</i> on Different Substrate: Evaluating biomass and lipid production for potential biodiesel feedstock. The data showed the biomass and lipid production of Nannochloropsis oculata at various substrates.
DOI: 10.57745/40aszd
title: Database_SOFS_Pilot_Study_2014-2018.tab

description: This file presents data from a pilot monocentric observational study. The data were collected retrospectively in archived medical records of preterm newborns without co-morbidities who were born from 2014 to 2018. Were consulted the medical records that stated that a program of standardized orofacial stimulations (SOFS) have actually been fulfilled to prevent full oral feeding delay and feeding impairments.
DOI: 10.57745/daoy0o
title: Database_PARENTALIM_Pilot_Study_2019_2022.tab

description: This file presents data from a pilot monocentric observational study. The data were collected prospectively in medical records in progress, during a follow-up of preterm newborns without co-morbidities who were born from 2019. From this moment, routine care of feeding impairment prevention changed in the NICU to be part of a developmental care approach, through parental support program named PARENTALIM. This developmental care program strengthened NIDCAP global preventive program for the cases of very preterm newborn.
DOI: 10.57745/gutilp
title: BINV_Inventory.pdf

description: :unav
DOI: 10.57745/zpxg5g
title: README_PARENTALIM_francais.txt

description: :unav
DOI: 10.15468/dl.w9trax
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "Geometry POLYGON((-114.82683 32.42447,-113.71247 32.03031,-112.34974 31.6318,-112.32002 31.77052,-113.53071 32.19692,-114.77729 32.53346,-114.82683 32.53346,-114.82683 32.42447))",
 "OccurrenceStatus is Present",
 "TaxonKey is Ovis canadensis Shaw, 1804"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000814-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4afnv3
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neoblattella detersa (Walker, 1868)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 78 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000811-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.veksqk
title: Occurrence Download

description: A dataset containing 302 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Piptocoma discolor (Kunth) Pruski"
 ]
}

 The dataset includes 302 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000812-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9gt5hc
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ponthieva villosa Lindl."
 ]
}

 The dataset includes 81 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000813-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gs35ph
title: Occurrence Download

description: A dataset containing 31800659 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 {
 "not" : {
 "PhylumKey" : [
 "is Chordata"
 ]
 }
 },
 "ClassKey is one of (Thaliacea, Ascidiacea, Appendicularia, Leptocardii)"
 ]
 },
 "KingdomKey is Animalia",
 "DatasetKey is one of (Texas A&M University Insect Collection, iNaturalist Research-grade Observations, University of Texas, Biodiversity Center, Entomology Collection (UTIC))"
 ]
}

 The dataset includes 31800659 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000805-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h6k4us
title: Occurrence Download

description: A dataset containing 48892 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "StateProvince is FLorida",
 "TaxonKey is Mammalia",
 "Year 2020-2025"
 ]
}

 The dataset includes 48892 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000815-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bbzzfw
title: Occurrence Download

description: A dataset containing 440 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-124 31,-100 31,-100 52,-124 52,-124 31))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sporobolus wrightii Scribn.",
 "Year 1975-2025"
 ]
}

 The dataset includes 440 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000816-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ys2pyv
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-87.58217 -0.73597,-61.41783 -0.73597,-61.41783 9.73597,-87.58217 9.73597,-87.58217 -0.73597))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bolitoglossa capitana Brame & Wake, 1963"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000818-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s5s9ze
title: Occurrence Download

description: A dataset containing 1162 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Chile",
 "TaxonKey is Jubaea chilensis (Molina) Baill."
 ]
}

 The dataset includes 1162 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000819-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6sssqj
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation, Occurrence evidence)",
 "Geometry POLYGON((-114.77919 32.54756,-114.81466 32.36512,-112.07306 31.49348,-112.00211 31.68606,-114.77919 32.54756))",
 "TaxonKey is Antilocapra americana sonoriensis Goldman, 1945"
 ]
}

 The dataset includes 12 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000820-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ptkp7w
title: Occurrence Download

description: A dataset containing 14501 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hipparchia semele Linnaeus, 1758",
 "Year is greater than or equal to 1995",
 "Year is less than or equal to 2025",
 "DecimalLongitude is greater than or equal to 6",
 "DecimalLongitude is less than or equal to 13",
 "DecimalLatitude is greater than or equal to 38",
 "DecimalLatitude is less than or equal to 57"
 ]
}

 The dataset includes 14501 records from 121 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000821-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.erkb35
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-87.58217 -0.73597,-61.41783 -0.73597,-61.41783 9.73597,-87.58217 9.73597,-87.58217 -0.73597))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bolitoglossa capitana Brame & Wake, 1963"
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000825-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48420/26364184
title: Dataset EV1 for manuscript "HAND1 level controls the specification of multipotent cardiac and extraembryonic progenitors from human pluripotent stem cells"

description: Supplemental data for Lynch et al.<b> </b>The EMBO Journal 2025, https://doi.org/10.1038/s44318-025-00409-0The file consists of an excel spreadsheet including a variety of genomics data analysis (RNA-seq, ATAC-seq, ChIP-seq, SCENIC analysis). A detailed description is included in the first tab of the file as named 'Legend'.