cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/tfd36h548n.1
title: Escape behaviour in Estonian birds: differences in flight initiation distance (FID) between urban and rural populations

description: This data contains 2129 observations of escape behaviour from 57 bird species from Estonian urban and rural habitats. Data was collected in 2015-2016 by Kunter Tätte. Flight initiation distances are accompanied by starting distances, alert distances and various other covariates. This data contains observations from four studies (but not observations collected by other authors): 1) Samia, D.S.M., Blumstein, D.T., Díaz, M., Grim, T., Ibáñez-Álamo, J.D., Jokimäki, J., Tätte, K., Markó, G., Tryjanowski, P., Møller, A.P. (2017). Rural-Urban Differences in Escape Behavior of European Birds Across a Latitudinal Gradient. Frontiers in Ecology and Evolution, 5: 66. 2) Tätte, K., Møller, A.P., Mänd, R. (2018). Towards an integrated view of escape decisions in birds: relation between flight initiation distance and distance fled. Animal Behaviour, 136: 75-86. 3) Morelli, F., Benedetti, Y., Díaz, M., Grim, T., Ibáñez-Álamo, J., Jokimaki, J., Kaisanlahti-Jokimäki, M.L., Tätte, K., Marko, G., Jiang, Y., Tryjanowski, P., Møller, A.P. (2018). Contagious fear: Escape behavior increases with flock size in European gregarious birds. Ecology and Evolution, 9(10), 6096-6104. 4) Unpublished data. Mainly for a discontinued project titled "Effects of winter weather and latitude on escape decisions" in 2015 by Anders Pape Møller. There is also excluded data from the first three studies (i.e. either species with too few observations, or species not of interest in a particular study, or repeat observations) Some remarks: * All distances are in meters, but snow cover in cm * Temperatures are in celsius. * This data set is good for urban-rural comparisons because (a) I always collected observations from both habitats on the same day, (b) starting distances between urban and rural habitats are very similar, (c) there is a large overlap between species composition * Most birds were located on the ground (initial_perch_height = 0) * Whenever a column name has "repeat_..." as prefix, it indicates a second subsequent approach to the same individual. After the first approach I moved back to a starting distance of about 30 m and then recorded alert distance and FID again. This repeat data has not been analyzed or used anywhere. * In the column titled sex, M=male, F=female. I am not very certain about how well I was able to sex Motacilla alba, but observations from other species should be fine. Sex data has not been analyzed. * approach_speed "normal" indicates a walking speed of 1.3 m/s, while "fast" was about 2.6 m/s. However, note that some observations were made during wintertime with snow, meaning that the approach speeds might have been slower then. I would treat winter data with caution. There is also a column "bird_feeder_nearby" that indicates whether a bird feeder was in sight, but it does not necessarily mean that the bird was feeding there. * Column on flock size does not discriminate between same-species groups and mixed-species groups.
DOI: 10.17632/7ph4nx8hnc.1
title: Dataset on dynamics of Coronavirus on Twitter

description: This dataset comprises different databases related to the Twitter posts around coronavirus. The general dataset consists of 8,982,694 Twitter posts (tweets). All the data collected was searched using the keyword “Coronavirus”. The 8.98M were gathered from January 21 to February 12, 2020, i.e. 23 days.
DOI: 10.17632/sdtc25w6fg.2
title: Julia code for Surface Temperature Estimation in Determined Multi-Wavelength Pyrometry Systems

description: Julia code used to simulate the data presented in "Surface Temperature Estimation in Determined Multi-Wavelength Pyrometry Systems"
DOI: 10.17632/svrn89gkd4.1
title: Observation of synergistic antibacterial properties of Prodigiosin from Serratia marcescens jx-1 with metal ions in clinical isolates of Staphylococcus aureus

description: Data showed we obtained clinical isolates of Staphylococcus aureus including Methicillin-resistant S. aureus (MRSA) and Methicillin-sensitive S. aureus (MSSA) strains and evaluated the antibacterial efficacy of prodigiosin alone or in combination with different metal ions on clinical isolates of MRSA and MSSA strains. The results showed the metal ions Cu(II), Al(III), and Zn(II) can inhibit the cell growth of MRSA and MSSA at concentrations between 0.1 mM and 1.5 mM. and we found that also Zn(II) and Al(III) in combination with PG resulted in a significant synergistic antibacterial effect against MRSA and MSSA.
DOI: 10.17632/sdtc25w6fg.3
title: Julia code for Surface Temperature Estimation in Determined Multi-Wavelength Pyrometry Systems

description: Julia code used to simulate the data presented in "Surface Temperature Estimation in Determined Multi-Wavelength Pyrometry Systems"
DOI: 10.17632/bnfzdtbmzf.3
title: Open dataset for: "Delta-beta cross-frequency coupling as an index of stress regulation during social-evaluative threat"

description: Open data and R analysis scripts for the paper as submitted for publication: "Poppelaars, E. S., Klackl, J., Pletzer, B., & Jonas, E. (2020). Delta-beta cross-frequency coupling as an index of stress regulation during social-evaluative threat." Hypotheses and analyses were preregistered: Poppelaars, E. S., Klackl, J., Pletzer, B., & Jonas, E. (2018). Delta-beta cross-frequency coupling as an index of stress regulation during social-evaluative threat. Open Science Framework. https://osf.io/8gchf/register/565fb3678c5e4a66b5582f67. Description of the dataset: A dataset of 37 men and 30 women (tested in the luteal phase of their menstrual cycle) participated in a public speaking task to induce social-evaluative threat. Responses of multiple stress systems were measured (sympathetic and parasympathetic nervous system activity, self-reported affect, and hypothalamic–pituitary–adrenal axis activity), as well as personality traits (e.g. trait social anxiety), and EEG delta-beta cross-frequency coupling (e.g., frontal and parietal amplitude-amplitude correlation and phase-amplitude coupling). Description of analyses files: - File 'README.txt' contains the description of the files (metadata). - File 'SET_CFC_MatlabOutput.xlsx' contains the delta-beta coupling data, calculated using MATLAB scripts from https://github.com/ESPoppelaars/Cross-frequency-coupling. - File 'SETData.sav' contains the raw stress and personality data, taken from https://doi.org/10.17632/7vj8r76s6f. - Files 'SET_CFC.outl.del.RData' contains the complete dataset with missing values and outliers deleted. - File 'Codebook_SET_CFC.outl.del.csv' contains a description of all variables in the 'SET_CFC.outl.del.RData' file (metadata). - Files 'SET_CFC.outl.del.imp.RData' and 'SET_CFC.outl.del.imp.extra.RData' contain multiple imputed datasets (without missing values) that can be used to reproduce results from the paper. - File 'LSA_HSA_brief.RData' contains data to use as informed priors for the Bayesian analyses, calculated from data published at https://doi.org/10.3758/s13415-018-0603-7. - File 'Codebook_LSA_HSA_brief.csv' contains a description of all variables in the 'LSA_HSA_brief.RData' file (metadata). - File '01_CalculationOfData.R' is an R analysis script that imports the raw data, calculates new variables, and imputes missing data via multiple imputation using the 'predictorMatrixAdj.xlsx' file. - File '02_AnalysisOfImputedData.R' is an R analysis script that calculates descriptive statistics, creates plots, and tests hypotheses using t-tests, Bayesian statistics, and multiple lineair regressions. Also uses the custom functions: 'BF.evidence.R', 'cohen.d.magnitude.R' and 'p.value.sig.R', as well as the 'BF_t.R' file as taken from https://doi.org/10.17045/sthlmuni.4981154.v3.
DOI: 10.17632/6hy8tsrkf9.1
title: Research data for article: Amino acid δ13C and δ15N patterns from sediment trap time series and deep-sea corals: implications for biogeochemical and ecological reconstructions in paleoarchives

description: Research data used in our article "Amino acid δ13C and δ15N patterns from sediment trap time series and deep-sea corals: implications for biogeochemical and ecological reconstructions in paleoarchives" Table 1. Bulk and amino acid δ13C records in deep-sea sediment traps (S2) and coral skeletons (A2 and A11) in Monterey Bay, California. Table 2. Bulk and amino acid δ15N records in deep-sea sediment traps (S2) and coral skeletons (A2 and A11) in Monterey Bay, California. Table EA1. δ13C and δ15N values (‰) of individual amino acids in in-house reference standard (homogenized cyanobacteria) analyzed along with field samples. Table EA3. Estimated vs. measured δ13C and δ15N values (‰) of export production in Monterey Bay, California.
DOI: 10.17632/vchs6rtdxp.1
title: Enhanced Inner-Ear Organoid Formation from Mouse Embryonic Stem Cells by Photobiomodulation

description: RNA sequencing data to Identify DEGs in control EBs and EBs irradiated at 630 nm. RNA-seq raw data 1. Control EBs - read1 & read2 (fq.gz) 2. EBs irradiated at 630 nm - read1 & read2 (fq.gz) RNA-seq raw data of this study are available at other drive (https://drive.google.com/open?id=1JJP4eRvW0r4ZviSvGQJOJKD2eb4_J6os).
DOI: 10.14469/hpc/7037
title: Michael 1,4 addition, G = TS2, C-C formation, wB97XD/Def2-TZVPP with one formyl group removed G = -402.192661

description: Gaussian Calculation
DOI: 10.17632/s7j9n6zj9h.1
title: Data for: 3558526

description: The concept of Fuzzy Time Series to predict things that will happen based on the data in the past, while Markov Chain assist in estimating the changes that may occur in the future. With methods are used to predict the incidence of natural disasters in the future. From the research that has been done, it appears the change, an increase of each disaster, like a tornado reaches 3%, floods reaches 16%, landslides reaches 7%, transport accidents reached 25% and volcanic eruptions as high as 50%.
DOI: 10.17632/dv7hmbgh63.1
title: Codes to produce figures in "Dispersal-induced instability in complex ecosystems"

description: Codes to produce the data in the figures in the main paper. These codes utilise the theory established in the methods and Supplemental material. Codes are written in Python (Jupyter) and Wolfram Mathematica notebooks.
DOI: 10.17632/bnvdndn6rz.1
title: Unprocessed images DEVELOPMENTAL-CELL-D-19-00643
DOI: 10.17632/bnvdndn6rz.2
title: Unprocessed images DEVELOPMENTAL-CELL-D-19-00643
DOI: 10.17632/wcfvmgmb3v.1
title: Dataset of Geochronology, geochemistry and petrogenesis of Triassic granitoids in central Hunan: implications for Indosinian tectonic evolution of the South China Craton

description: The whole-rock elemental concentrations and Sr–Nd isotopes, biotite geochemistry, and zircon U–Pb dating and Hf isotopic compositions as well as supplementary appendixes
DOI: 10.17632/whtnz2w7t9.1
title: Arabica coffee - IAC/EMBRAPA - BRAZIL
DOI: 10.17632/tmxy3mntbr.1
title: Data for: 3559059

description: Small Medium and Micro Enterprises (SMMEs) play a significant role in the socio-economic stimulation of South Africa. Particularly, South African SMMEs are believed to contribute around 50% to the national Gross Domestic Product (GDP) while simultaneously employing up to 80% of the national workforce. Prior research does however suggest that these business entities have among the worst sustainability rates in the world as up to 75% fail after being in operation for three years. A probable reason for the latter dispensation is the non-management of economic factors, one of which is that of Taxation. Taxation is a mandatory obligation imposed on citizens of a country to fund state expenditure. For this working paper, Customs and Excise Taxation is focused on; Taxation that is levied on goods and/or services that are hazardous to both human- and environmental health and wellness. Over the years, Customs and Excise Taxation has not only been imposed on tobacco products, alcoholic products and plastic bags but have also increased year-on-year, to date. As such, the perception was formulated by the author that the sustainability of South African (retail) SMMEs, especially those who sell tobacco products, alcoholic products and plastic bags, are adversely affected by the year-on-year increases of Customs and Excise Taxation. The primary objective of this working paper is to ascertain whether the perception formulated shows truth, in theory. This working paper therefore takes on a non-empirical, exploratory approach that makes use of a qualitative research methodology. Stemming from the findings, thus far, it appears that Customs and Excise Taxation adversely influences the sustainability of South African SMMEs that sell tobacco products, alcoholic products and plastic bags.
DOI: 10.17037/data.00001657
title: Data for: Acceptability and Preferences of two different Community Models of ART delivery in a high prevalence Urban Setting in Zambia, nested within the HPTN 071 (PopART) trial.

description: The dataset contains prospectively-collected routine data obtained from stable HIV+ patients on Antiretroviral therapy (ART) when attending one of two primary health care facilities, each of served a community in Lusaka, Zambia. The data was collected for Monitoring and Evaluation purposes as part of the Zambian ART program. It contains patient baseline characteristics (sex, age, years on ART, viral load measurement) and other information used to determine their eligibility, acceptability and the randomized interventions they were allocated to and whether they agreed to the model of delivery and their preferences.
description: The study was based on prospectively collected routine data, gathered for M&E purposes of the Zambian ART program. Routine clinical data was collected at enrolment using patient clinical records and entered in our study registers. At baseline the following variables were collected for patient and their clinic records to determine influence on outcome (Age, sex, recent viral load, WHO staging, ART start date). At the time of enrolment, patient residential zones, allocated intervention model, whether they agreed to take up the offer or not and their preferences were collected in the study eligibility form. Data collected in the eligibility forms were then entered in the database. Data was exported as comma separated values (CSV) files. CSV files were imported and merged tables by patient unique ID number using STATA and data was cleaned using STATA. Data was analysed by STATA and storage of datasets, STATA files, codebook on at our research HQ server (Zambart).
DOI: 10.17632/hbmt435zs7.4
title: Data of GHGs from the sites in China

description: in-situ observation data at the Mt. Waliguan and Shangri-La
DOI: 10.21227/pzg5-vb11
title: Aerial Robotic System for Inventory of Stockpile Warehouses

description: Dataset of rosbags collected during autonomous drone flight inside a warehouse of stockpiles. PCD files created using reconstruction method proposed by article
DOI: 10.25345/c54705
title: MassIVE MSV000085152 - N-linked glycans from recombinant SARS, MERS and HKU1 S proteins
title: PNGase F released N-linked glycans from recombinant SARS MERS and HKU1 coronavirus S protein trimers
DOI: 10.21227/tv99-wh34
title: Aerial Robotic System for Inventory of Stockpile Warehouses

description: Dataset of rosbags collected during autonomous drone flight inside a warehouse of stockpiles. PCD files created using reconstruction method proposed by article
DOI: 10.17632/x4zmdxzpnc.3
title: Data Set for "Holocene climate modulates mud supply, transportation, and sedimentation on the East China Sea shelf"

description: The data includes six updated chronological frames of sediment cores (ECMZ, MZ02, MD06-3040, EC2005, MD06-3042, and MZ01) using Clam (version 2.2) program via R software, heavy minerals in core ECMZ, and Holocene variations in mass accumulation rate (MAR) of mud on the East China Sea shelf in the western Pacific.
DOI: 10.5281/zenodo.3727035
title: Replication package for "Wikifying Software Artifacts"

description: This replication package contains all data files necessary to verify and replicate our findings presented in the manuscript "Wikifying Software Artifacts".
DOI: 10.21227/yck1-3v72
title: Aerial Robotic System for Inventory of Stockpile Warehouses

description: Dataset of rosbags collected during autonomous drone flight inside a warehouse of stockpiles. PCD files created using reconstruction method proposed by article
DOI: 10.5281/zenodo.3726920
title: A chromosome-scale genome assembly resource for Myriosclerotinia sulcatula infecting sedge grass (Carex sp.)

description: The fungus <em>Myriosclerotinia sulcatula</em> is a close relative of the notorious polyphagous plant pathogens <em>Botrytis cinerea</em> and <em>Sclerotinia sclerotiorum</em> but exhibits a host range restricted to plants from the <em>Carex</em>genus (<em>Cyperaceae</em> family). To date, there are no genomic resources available for fungi in the <em>Myriosclerotinia</em>genus. Here, we present a chromosome-scale reference genome assembly for <em>M. sulcatula</em>. The assembly contains 24 contigs with a total length of 43.53 Mbp, with scaffold N<sub>50</sub> of 2,649.7 kbp and N<sub>90</sub> of 1,133.1 kbp. BRAKER-predicted gene models were manually curated using WebApollo, resulting in 11,275 protein-coding genes that we functionally annotated. We provide a high-quality reference genome assembly and annotation for <em>M. sulcatula</em> as a resource for studying evolution and pathogenicity in fungi from the <em>Sclerotiniaceae</em> family.
DOI: 10.5281/zenodo.3726921
title: A chromosome-scale genome assembly resource for Myriosclerotinia sulcatula infecting sedge grass (Carex sp.)

description: The fungus <em>Myriosclerotinia sulcatula</em> is a close relative of the notorious polyphagous plant pathogens <em>Botrytis cinerea</em> and <em>Sclerotinia sclerotiorum</em> but exhibits a host range restricted to plants from the <em>Carex</em>genus (<em>Cyperaceae</em> family). To date, there are no genomic resources available for fungi in the <em>Myriosclerotinia</em>genus. Here, we present a chromosome-scale reference genome assembly for <em>M. sulcatula</em>. The assembly contains 24 contigs with a total length of 43.53 Mbp, with scaffold N<sub>50</sub> of 2,649.7 kbp and N<sub>90</sub> of 1,133.1 kbp. BRAKER-predicted gene models were manually curated using WebApollo, resulting in 11,275 protein-coding genes that we functionally annotated. We provide a high-quality reference genome assembly and annotation for <em>M. sulcatula</em> as a resource for studying evolution and pathogenicity in fungi from the <em>Sclerotiniaceae</em> family.
DOI: 10.15468/neskez
title: Protected Areas - Global Register of Introduced and Invasive Species - Curieuse Special Reserve, Seychelles

description: The Protected Areas -Global Register of Introduced and Invasive Species (PA-GRIIS) presents validated checklists of introduced (alien) and invasive alien species at a site level. The primary intention of PA-GRIIS is to provide checklists of introduced (alien) and invasive species present on designated protected areas (such as National Parks, Ramsar sites- Wetlands of International importance, World Heritage Sites (natural and mixed), Marine protected areas etc.) and other areas of biodiversity significance (such as Important Plant Areas (IPA), Important Bird Areas (IBA) etc.), as well as buffer zones around these areas. Areas surrounding protected areas and other areas of high biodiversity significance can serve as an invasion source of alien and invasive species propagules. The establishment of buffer zones and the management of alien and invasive species within these areas is a key management strategy in the prevention of introduction and control/management of biological invasions. In the case of islands buffer zones. Checklists are living entities, especially for biological invasions given the growing nature of the problem. PA -GRIIS checklists are based on the GRIIS published methodology (Pagad et al 2018) and supported by the Integrated Publishing Tool of the Global Biodiversity Information Infrastructure (GBIF) that jointly enable ongoing improvements and updates to expand their taxonomic coverage and completeness. Phase 1 of the PA -GRIIS project will present close to 100 exemplar checklists of introduced (alien) and invasive species in a selection of protected areas and other areas of biodiversity significance This annotated checklist is of introduced (alien) and invasive alien species known to occur in the nationally designated Curieuse Special Reserve, Seychelles
DOI: 10.7910/dvn/1sbqcx/6azjgy
title: 02-analyze_selfrep_behaviors.R

description: Analyze population and subgroup self-reported compliance with health practices in past week.
DOI: 10.7910/dvn/oxtlfn/hzjxc7
title: Policies cube 2018.pdf

description: :unav
DOI: 10.6073/pasta/19cf88ce1278d8aec2bf776de13f4ff4
title: Cichlasoma urophthalmus microsatellite fragment size collected from the Florida Everglades (FCE) and Central America from June 2010 to March 2013

description: Fragment sizes for 17 microsatellite markers obtained from samples of Cichlasoma urophthalmus collected from fin clippings of fish caught by angling and/or cast netting within the Florida Everglades and Central America. DNA was extracted, amplified and sizes of microsatellite fragments were rounded to nearest unit. Data were used to determine population genetic structure using GenAlex, Structure and DIYABC programs.
DOI: 10.7910/dvn/1sbqcx/awtffu
title: 01-analyze_safety_opinion.R

description: Analyze population and subgroup opinions about government measures.
DOI: 10.7910/dvn/1sbqcx/hln5xt
title: 04-analyze_leavehome.R

description: Analyze population and subgroup reasons to leave home in next 5 days.
DOI: 10.7910/dvn/1sbqcx/iwavxu
title: 05-analyze_stayhome.R

description: Analyze population and subgroup cited negative aspects of staying home.
DOI: 10.7910/dvn/1sbqcx/p1x59f
title: 03-analyze_govt_opinion.R

description: Analyze skeptical opinion groups.
DOI: 10.21227/3gda-8276
title: Aerial Robotic System for Inventory of Stockpile Warehouses

description: Dataset of rosbags collected during autonomous drone flight inside a warehouse of stockpiles. PCD files created using reconstruction method proposed by article
DOI: 10.21227/647r-aa24
title: Aerial Robotic System for Inventory of Stockpile Warehouses

description: Dataset of rosbags collected during autonomous drone flight inside a warehouse of stockpiles. PCD files created using reconstruction method proposed by article
DOI: 10.7910/dvn/1sbqcx/bt9et2
title: mar18_responses.tab

description: Anonymized responses from full nationally representative Qualtrics survey fielded between March 18th and March 20th 2020 (n=3,452).
DOI: 10.15129/20fcbd23-5959-4113-8b1c-ff728334cb06
title: Data for: "Efficient generation of relativistic near-single-cycle mid-infrared pulses in plasmas"

description: This data was produced as part of the investigation of "Efficient generation of relativistic near-single-cycle mid-infrared pulses in plasmas". The file input.deck is the initialization file used to produce the data via fully relativistic three-dimensional (3D) particle-in-cell (PIC) simulations using the 3D PIC code EPOCH (version 4.8.3). EPOCH is the Extendable Open advanced relativistic electromagnetic PIC code.