cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21586923.v3
title: CVEjoin: An Information Security Vulnerability and Threat Intelligence Dataset

description: The risk of exploiting information security vulnerabilities should not be determined solely by a single metric, such as the Common Vulnerability Scoring System (CVSS). This approach disregards the global threat landscape and the vulnerable asset. Therefore, in addition to using traditional Vulnerability Management (VM) tools, analysts and researchers must manually curate datasets containing threat intelligence and context-specific information about security flaws. However, this activity is non-trivial and error-prone. To aid this endeavor, we developed a fully automated tool capable of gathering data about the intrinsic characteristics of vulnerabilities available in the National Vulnerability Database (NVD) and augmented it with information collected from multiple security feeds and social networks. Altogether, we collected data on more than 200,000 vulnerabilities that can be used for various research topics, e.g., analyzing the risk of exploiting security flaws, vulnerability severity prediction, etc. In this paper, we present a detailed description of the methodology used to create our dataset with its attributes. Additionally, we perform an exploratory analysis of the data gathered, and finally, we present an illustrative example of how analysts could use the data collected. The CVEjoin dataset and the scripts used for its construction are publicly available on GitHub.
DOI: 10.6084/m9.figshare.899753.v1
title: IDL routines to compute XYZ and UVW coordinates

description: These IDL routines can be used to transform ra, dec, distance and the error on distance for any number of stars to XYZ coordinates and their errors, as well as ra, dec, distance, proper motion and radial velocity to UVW coordinates and their errors. This package includes a modification on the glactc.pro astrolib routine that is significantly faster with large sets of objects (see individual .pro files for more details). Please refer to Gagné et al. 2014 (see link) when using these routines.
DOI: 10.6084/m9.figshare.24518158.v1
title: Source Data for <i>Non-Universal Impact of Cholesterol on Membranes: Mobility, Curvature Sensing, and Elasticity</i>

description: Source data for plots in manuscript<i>Non-Universal Impact of Cholesterol on Membranes: Mobility, Curvature Sensing, and Elasticity</i>by Matthias Pöhnl, Marius F.W. Trollmann, Rainer A. Böckmann
DOI: 10.6084/m9.figshare.25347760.v3
title: <b>Widespread crab burrows enhance </b><b>greenhouse gas </b><b>emissions from coastal blue carbon ecosystems</b>

description: Investigation data on crab burrows (scale of large climate gradient, from China).The data includes：Particle size, environmental variables, soil organic carbon (SOC), soil organic matter (SOM), and light-heavy fraction organic carbon (L-HFOC) of 106 sediment samples (burrow or matrix).GHGs emission rate, GHGs cumulative flux, and enzyme activity of 34 sediment samples (incubation experiment).<br>
DOI: 10.6084/m9.figshare.1405588.v1
title: Coroner - Celian Noumbiwe inquest correspondence

description: In 2007 a baby named Celian Noumbiwe bled to death in Berkshire, following his cultural/religious circumcision by a GP. The local press reported the death - see link to newspaper article below but otherwise the case seems only to have been briefly covered by one national newspaper - the Times. At the inquest Coroner Peter Bedford criticised the arrangements around the circumcision - the doctor did not see the parents beforehand and the consent form made no reference to the risk of post operative bleeding. The emergency number did not work. On the phone to me Coroner Bedford expressed his frustration that on contacting the GMC and the (then) healthcare commission to ascertain what should be the standards around a baby's circumcision neither organisation seemed willing /able to give such guidance. His and their correspondence is attached. It's of interest to note that the Healthcare Commission seems unaware that religious child circumcision is contracted by the NHS - at the time of writing there was at least one large infant genital cutting scheme which had been running for several years.
DOI: 10.6084/m9.figshare.28558307.v1
title: <b>Distinct root exudation patterns in emergent plants yield similar rhizosphere microbial communities</b>

description: Emergent plants with different root morphologies show considerable variation in their nitrogen removal capabilities via nitrification and denitrification processes; however, the underlying mechanisms are still unknown. This study investigates how root morphology influences root exudates and rhizosphere microbial communities in two emergent plant species: Zizania latifolia (taprooted) and Pontederia cordata (fibrous-rooted). Root exudates were collected and analyzed using ultra-high performance liquid chromatography-tandem mass spectrometry (UHPLC-MS/MS), revealing distinct metabolic profiles between the two species. Z. latifolia primarily secreted benzenoids, while P. cordata exuded higher levels of lipids and lipid-like molecules. Despite these differences, the rhizosphere bacterial and fungal communities of both plants were similar in both structures and potential functions. Interestingly, the differential metabolites identified in Z. latifolia root exudates, especially amino acids (e.g., denticetic acid and itopride), exhibited significant and positive correlations with denitrifying bacterial genera, such as Pseudomonas and Clostridium, suggesting that these metabolites may play a crucial role in the recruitment of specific microbial communities. These findings highlight the complex interactions between root exudates, rhizosphere microbes, and nitrogen cycling in emergent plants, providing insights for optimizing wetland restoration strategies.
DOI: 10.6084/m9.figshare.969685.v1
title: Low-complexity regions in hs37d5

description: Identified with the mdust program.
DOI: 10.6084/m9.figshare.28519385.v1
title: SmellyCode++.csv

description: The dataset provides a well-rounded representation of code quality by incorporating both textual and numerical features, making it valuable for machine learning and code analysis tasks. The textual feature, represented by a "Code" column, contains Java classes or methods that exhibit code smells. These code snippets have been preprocessed to remove unnecessary elements like comments, empty lines, and extra newline characters, ensuring consistency. In addition, the dataset includes 14 numerical features that capture various code metrics, such as logical lines, distinct operators and operands, cyclomatic complexity, and effort estimation. These numerical attributes help assess code complexity, maintainability, and potential defects. The dataset’s statistical summaries and visual representations further highlight the distribution of these features, making it a robust resource for empirical research and model training.
DOI: 10.6084/m9.figshare.26285464.v1
title: A PRISMA-ScR checklist for the article, The application of exponential random graph models to online learning networks: a scoping review

description: This checklist represents the quality assurance for the study, The application of exponential random graph models to online learning networks: a scoping review.
DOI: 10.6084/m9.figshare.28544321.v1
title: Data file of Academic Motivation Study of medical students at different phases of academic year

description: Data file of Academic Motivation Study of medical students at different phases of academic year
DOI: 10.6084/m9.figshare.24588951.v1
title: DLP and Europa Survey Data

description: Survey data from 2022 of local visitors to Disneyland Paris and Europa Park
DOI: 10.6084/m9.figshare.14055197.v1
title: Dataset for automated building energy simulation model generation of a case study single family house

description: Dataset contains- a CityGML model representation of the case study building. Polygons are extracted from a photogrammetrically generated point cloud created from aerial (UAV-based) imagery. Windows were recognised on polygon textures.- data recorded during a measurement campaign (heating-up, approximately steady temperature, cooldown) in February 2019- model parameters of six building energy simulation model variations, see paper for details- TEASER json files for the six model variation- floor plans (sectional view, ground floor, first floor)<br>
DOI: 10.6084/m9.figshare.14471904.v1
title: scQuint data objects - Tabula Muris

description: Data objects processed by scQuint.
DOI: 10.6084/m9.figshare.21972131.v1
title: Millimetres precipitation around the world - 2022

description: This dataset contains the millimetres of precipitation around the world during year 2022. The source was NASA EARTHDATA.
DOI: 10.6084/m9.figshare.21936372.v1
title: Misinformation and Trust

description: Data from pooled cross-national surveys conducted in 2019 and 2021
DOI: 10.6084/m9.figshare.24079158.v1
title: kap_covid19

description: Cross sectional study on Covid 19 Knowledge
DOI: 10.6084/m9.figshare.25138334.v1
title: compressed Inphase and Quadrature data

description: 1D Vector IQ pairs for MEX-TGO Mutual Radio Occultations
DOI: 10.6084/m9.figshare.27315459.v1
title: Raw data and cleaned data

description: Clustering statsbomb
DOI: 10.6084/m9.figshare.27798405.v1
title: Whole-genome sequencing of the <i>Streptomyces coelicolor bldA39</i> mutant (J1700) of reveals hundreds of previously unknown mutations.

description: <b>Abstract</b>We report the genome sequence of the <i>bldA39 </i>(J1700) mutant <i>Streptomyces coelicolor</i>, a historically important strain that is deficient in sporulation and antimicrobial production. The <i>S. coelicolor</i> J1700 strain was used extensively from the 1980s onwards to underpin important discoveries in development and antibiotic production in <i>Streptomyces.</i> The <i>bldA </i>gene encodes a leucyl transfer RNA (tRNA), required for the translation of the rare TTA codon found in ~2 % of genes<i> </i>in <i>Streptomyces. </i>The whole genome of <i>S. coelicolor</i> J1700 was obtained via Illumina sequencing and mapped to the of <i>S. coelicolor </i>M145 reference genome. Analysis of the genome sequence compared to <i>S. coelicolor</i> M145 identified the known <i>bldA39</i> mutation (T&gt;C) and revealed more than 300 further mutations, likely associated with the <i>S. coelicolor </i>J1501 genetic background the strain was created in, including the nature of the <i>hisA1 </i>and <i>uraA1</i> alleles used extensively in genetic mapping experiments and several mutations in natural product biosynthetic gene clusters. This work highlights the importance of whole genome sequencing of historically important strains.<br><b>Data Summary</b>This Whole Genome Sequencing project has been deposited in NCBI under the Bioproject PRJNA1186139. The WGS reads used can be accessed in the NCBI’s SRA under the accession number SAMN44744323.
DOI: 10.6084/m9.figshare.28746512.v1
title: Table S4. Markers to test genetic purity of the inbred lines used to generate populations for mapping and the ones obtained after crossing the gene-edited variants to the parental lines. (3 pages)

description: Table S4. Markers to test genetic purity of the inbred lines used to generate populations for mapping and the ones obtained after crossing the gene-edited variants to the parental lines. (3 pages)<b>. </b><b>A dispensable peptidase facilitates maize lethal necrosis by promoting the replication of maize chlorotic mottle virus</b>
DOI: 10.6084/m9.figshare.16641292.v2
title: A data-driven estimate of topsoil (0-5 cm) isotope carbon across the Tibetan Plateau

description: This is a combined dataset of soil carbon isotope within 0-5 cm across Tibetan Plateau. <br>The primary dataset was from Lu et al., (2004) and Qi (2017). <br>Lu, H. Y., Wu, N. Q., Gu, Z. Y., Guo, Z. T., Wang, L., Wu, H. B., et al. (2004). Distribution of carbon isotope composition of modern soils on the Qinghai-Tibetan Plateau. <i>Biogeochemistry</i>, <i>70</i>, 273-297. https://doi.org/10.1023/B:BIOG.0000049343.48087.ac<br><br>Qi, L. (2017). <i>Distribution of Organic Carbon Isotope Composition for Modern Soils from the Eastern Margin of the Tibetan Plateau and its Main Controlling Factors</i>: China University of Geosciences, Wuhan.<br>The file named "TP_C13_1000m.tif" means the predicted gridded soil carbon isotopes (δ<sup>13</sup>C) dataset with a spatial resolution of 1000 m using Random Forest. <br>The file named "TP_beta_1000m.tif" means the calcuated β dataset with a spatial resolution of 1000 m. The β is a proxy the decomposition of soil organic carbon (SOC), calculated by δ<sup>13</sup>C divided by logarithmically converted SOC. <br>
DOI: 10.6084/m9.figshare.12356384.v2
title: Questionnaire-pesticide and lung cancer Thailand

description: Questionnaire for the study of pesticide exposure and lung cancer in Nakhon Sawan, Thailand.<br>
DOI: 10.6084/m9.figshare.22592050.v1
title: data

description: Data
DOI: 10.6084/m9.figshare.4822069.v1
title: Annotation table for A. ervi transcriptome, filtered dataset

description: Annotation table (generated with BlastX against NR database, GO terms assigned with Blas2go) of <i>A. ervi</i> transcriptome dataset. <br>
DOI: 10.6084/m9.figshare.7172327.v1
title: Eoherpeton R fibula high res .01345

description: [System]Scanner=Skyscan1172Instrument S/N=10L01168Hardware version=FSoftware=Version 1. 5 (build 25)Home directory=C:\SkyScanSource Type=Hamamatsu 100/250Camera=Hamamatsu C9300 11Mp cameraCamera Pixel Size (um)= 8.91CameraXYRatio=0.9800Incl.in lifting (um/mm)=4.2000[User]User Name=UserComputer Name=[Acquisition]Data directory=D:\Results\Michael\2017-07-24_Eoherp_R_fibula_bumpFilename Prefix=Eoherp_fibula_Configuration=C:\SkyScan\config\Freija\Mousebone_50kv_200ua_960ms_med_al0.5Number of Files= 1127Source Voltage (kV)= 100Source Current (uA)= 100Number of Rows= 1336Number of Columns= 2000Image crop origin X= 0Image crop origin Y=0Camera binning=2x2Image Rotation=0.0800Gantry direction=CC<b>Image Pixel Size (um)= 13.45</b>Object to Source (mm)=257.800Camera to Source (mm)=341.657Vertical Object Position (mm)=4.000Optical Axis (line)= 680Filter=No filterImage Format=TIFFDepth (bits)=16Screen LUT=0Exposure (ms)= 1100Rotation Step (deg)=0.320Frame Averaging=ON (8)Random Movement=OFF (20)Use 360 Rotation=YESGeometrical Correction=ONCamera Offset=OFFMedian Filtering=ONFlat Field Correction=ONRotation Direction=CCScanning Trajectory=ROUNDType Of Motion=STEP AND SHOOTStudy Date and Time=Jul 24, 2017 20:25:45Scan duration=03:07:56Maximum vertical TS=5.0[Reconstruction]Reconstruction Program=NReconProgram Version=Version: 1.7.0.3Program Home Directory=C:\SkyScanReconstruction engine=GPUReconServerEngine version=Version: 1.7.0Reconstruction from batch=NoPostalignment=-0.50Reconstruction servers= DESKTOP-KT8GTHU Dataset Origin=Skyscan1172Dataset Prefix=Eoherp_fibula_Dataset Directory=D:\Results\Michael\2017-07-24_Eoherp_R_fibula_bumpOutput Directory=D:\Results\Michael\2017-07-24_Eoherp_R_fibula_bump\Eoherp_fibula_RecTime and Date=Jul 25, 2017 09:10:53First Section=35Last Section=1301Reconstruction duration per slice (seconds)=0.466456Total reconstruction time (1267 slices) in seconds=591.000000Section to Section Step=1Sections Count=1267Result File Type=TIFResult File Header Length (bytes)=12Result Image Width (pixels)=1800Result Image Height (pixels)=1120Pixel Size (um)=13.45334Reconstruction Angular Range (deg)=360.32Use 180+=OFFAngular Step (deg)=0.3200Smoothing=0Ring Artifact Correction=20Draw Scales=OFFObject Bigger than FOV=OFFReconstruction from ROI=ONROI Top (pixels)=1655ROI Bottom (pixels)=534ROI Left (pixels)=70ROI Right (pixels)=1871ROI reference length=2000Filter cutoff relative to Nyquist frequency=100Filter type=0Filter type description=Hamming (Alpha=0.54)Undersampling factor=1Threshold for defect pixel mask (%)=0Beam Hardening Correction (%)=100CS Static Rotation (deg)=0.00Minimum for CS to Image Conversion=-0.250142Maximum for CS to Image Conversion=1.503020HU Calibration=OFFBMP LUT=0Cone-beam Angle Horiz.(deg)=5.974561Cone-beam Angle Vert.(deg)=3.993010[File name convention]Filename Index Length=4Filename Prefix=Eoherp_fibula__rec<br>
DOI: 10.6084/m9.figshare.24994562.v5
title: Lateral Stiffening Design Simulation Data

description: This structural stress and deformation analysis shows the effects of an unevenly distributed load on a box shape with and without stiffened lateral structure when either the middle portion of the box is supported by a fixed support or both ends are.Furthermore, various ways for designing lateral plate stiffening techniques for ship's longitudinal strength improvement were also tested.Software used for simulation; ANSYS Version 2024 R1.Structural topology optimization and Statics Structural Analysis In addition, sample sketch Vessel geometry design in ANSYS SpaceClaim 2024 R1 are provided.
DOI: 10.6084/m9.figshare.1030641.v1
title: Cross-referenced nomenclature for fruitless neurons in the Drosophila brain

description: We present a correspondence between various nomenclatures for <em>fruitless</em> neurons in the adult <em>Drosophila</em> brain and neuroblast lineage clones.
DOI: 10.6084/m9.figshare.1250144.v1
title: FSL Evaluation Example Data Suite diffusion dataset

description: FSL's Evaluation Example Data Suite from Dr. Steve Smith and the FMRIB Analysis Group at the Univeristy of Oxford.
DOI: 10.6084/m9.figshare.19181540.v1
title: Glucose Homeostasis Genes Dataset

description: Genetic and clinical anonymous data for diabetic nephropathy patients
DOI: 10.6084/m9.figshare.13128506.v1
title: Bridging Adsorption Analytics and Catalytic Kinetics for Metal-Exchanged Zeolites

description: Understanding the structure-properties relationships of metal-exchanged zeolites is a challenging task. Here, correlations are established between the adsorption properties of Cu-ZSM5 and the reaction kinetics of NO reduction, generating descriptors applicable also to different zeolites and other dimers supported catalysts
DOI: 10.6084/m9.figshare.17205800.v1
title: Supplementary Material for: Combined higher frequency fish consumption and healthy lifestyle may lower the triglyceride/HDL-C ratio in middle-aged Japanese males: Anti-atherosclerotic effect of fish consumption

description: Background: Fish consumption may be associated with a low risk of coronary artery disease. We aimed to investigate whether higher fish consumption results in improved lifestyle behaviors and thus lower triglyceride/high-density lipoprotein cholesterol (TG/HDL-C) ratio––a predictor of atherosclerotic cardiovascular disease (ASCVD). Methods and results: This cross-sectional study included 2947 middle-aged Japanese males with no history of ASCVD or lipid-modifying therapy, who presented at the Health Planning Center of Nihon university hospital between April 2018 and March 2019. We performed an analysis of variance using fish consumption as a categorical variable (0-2 days, 3-4 days, or 5-7 days per week). The serum TG/HDL-C ratio in the 5-7 days fish consumption group was significantly lower than those in the 0-2- and 3-4-days fish consumption groups (p &lt; 0.0001 and p &lt; 0.01, respectively). Multiple regression stepwise analysis revealed that weekly fish consumption negatively and independently determined the TG/HDL-C ratio (β = -0.061, p = 0.001). As fish consumption increased, the proportion of subjects with smoking habits decreased (p = 0.014), those engaging in aerobic exercises and aggressive daily physical activity increased (p &lt; 0.0001 for both), and those with alcohol habit increased (p &lt; 0.0001). In addition, we developed the risk stratification for ASCVD by combining the serum HDL-C level and the serum TG/HDL-C ratio with fish intake. Conclusion: Increased frequency of fish consumption and improved lifestyle behaviors due to daily fish intake may work additively to lower the serum TG/HDL-C ratio. These associations may explain why high fish consumption is associated with a lower risk of ASCVD. Our findings may help physicians and nutritionists in treating patients with heart diseases and metabolic conditions by recommending a high fish diet in middle-aged Japanese males.
DOI: 10.6084/m9.figshare.10329311.v1
title: Table S2

description: Summary of the posterior distributions of parameters estimated by genomegaMap analyses of 10,209 Mycobacterium tuberculosis genomes in D. J. Wilson and The CRyPTIC Consortium (2019) for every coding sequence in the H37Rv reference genome (version 2, genbank accession number NC_000962.2).
DOI: 10.6084/m9.figshare.26076328.v1
title: Thumbnail images

description: To facilitate easier review, thumbnail images were created from the skull volumes, displaying them from six primary perspectives (top, bottom, left, right, front, and back).
DOI: 10.6084/m9.figshare.4135200.v1
title: IoT applications for data tagging the long-life sandwich cold chain:

description: <strong>IoT applications for data tagging the long-life sandwich cold chain: </strong>Led by: <strong>University of Birmingham</strong>With partners: ScoreSafe Ltd, Participating Food BusinessesProject lead: Madeleine Smith, Senior Teaching Fellow, Chemical Engineering<strong>Overview</strong>Project aims:To monitor the integrity of long-life sandwiches in the cold chain and validate their temperature maintenance in transportation and distribution areas using an automated monitoring system with cloud based data storage (the Scoresafe system).To assess the hygiene practices during circulating the long-life sandwiches within cold chain.The project will monitor the temperature of long-life sandwiches and assess hygiene practices during the circulation of the sandwiches in the local cold chain. Low temperature control of chilled foods is crucial to achieve safe and high quality goods. Temperature abuse leads to proliferation of spoilage and pathogenic microbes which can put temperature sensitive foods at risk of causing food borne diseases or producing undesirable characteristics. Additionally, the poor hygiene practices in making up and distributing chilled foods may increase their microbial loads adversely affecting shelf life.The tiny tag data loggers have been proven to be effective and accurate in logging food temperatures (rather than air temperatures) and can be programmed to record at regular intervals over a long period of time.The Scoresafe hygiene software is bespoke software for use on any android device which has been designed by the UoB and ScoreSafe to monitor CCP’s and automatically store the results on the cloud. This allows real time access to the data by anyone with the authority to access it.The sandwiches will be attached with tiny tag temperature data recorders (TG4080) to monitor their temperature remotely. These recorders are programmed to report all temperature readings during chilled transport and distribution where the sandwiches are most often exposed to temperature abuse. The cold chain scope starts at the manufacture and ends at sale to the final consumer.Anticipated impact:It improves monitoring and control of chilled foods temperature at transit and distribution as most tracking systems of refrigerated foods monitor only a set pointProvide food companies and local authorities with ongoing quantitative data on validation of expiry date during the shelf life of chilled products. This contributes to reducing food loss resulting from spoiled and unsafe products and protects public health by ensuring correct storage during the time the food is placed on the market.Accumulated data can be stored and modeled in database, and used by Food Standard Agency and food industry as a reference to improve more efficient refrigeration systems.