cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wbv3ng
title: Occurrence Download

description: A dataset containing 851 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (Denmark, Germany, Netherlands)",
 "TaxonKey is Sterna paradisaea Pontoppidan, 1763",
 "Year 1945-1965"
 ]
}

 The dataset includes 851 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004428-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/zj4x3426hv.2
title: Multiprotein bridging factor 1 is required for robust activation of the integrated stress response on collided ribosomes

description: The multiprotein bridging factor 1 (Mbf1) proteins comprise a family of conserved eukaryotic proteins thought to mediate the activity of stress-induced transcription factors. In yeast, Mbf1 has been proposed to function in the integrated stress response (ISR) by mediating a direct interaction between the basal transcription machinery and the process’s key effector Gcn4. Curiously, mounting recent evidence has strongly suggested that the factor (and its human homologue) is recruited to collided ribosomes, the very signal newly recognized to activate the ISR. Here we provide data that connect these otherwise seemingly disparate functions of Mbf1. Our findings reveal that Mbf1 functions as a core factor in the ISR process, responding early to stress and mediating the activation of Gcn2. We further show that the factor serves no role as a transcriptional coactivator of Gcn4; instead, Mbf1 and its human homologue are required for optimal stress-induced eIF2 phosphorylation and downstream de-repression of GCN4/ATF4 translation. Detailed mutational and biochemical analysis, together with a cryo-EM structure of the factor bound to collided ribosomes, shows that Mbf1’s contribution to the ISR is mediated through its interaction with ribosomes. Collectively, our data establish that Mbf1 functions in signaling by acting as a direct sensor of stress-induced ribosome collisions.
DOI: 10.17632/4f48833fnr.1
title: Raw Data Developed Model for Factors Affecting Indonesian PSTs’ Technology Integration during teaching practices

description: This dataset's raw data describes the variables that may affect the preservice teachers (PSTs) technology integration during teaching practices. This dataset addressed seven main aspects of technology integration, including demographic profile information, PSTs’ teaching preparation, acceptance and intention to use technology, PSTs' teacher technology skills, level of innovativeness, PSTs' technology integration during teaching practices, and the quality of PSTs’ technology integration.
DOI: 10.17632/4f48833fnr.2
title: Raw Data Developed Model for Factors Affecting Indonesian PSTs’ Technology Integration during teaching practices

description: This dataset's raw data describes the variables that may affect the preservice teachers (PSTs) technology integration during teaching practices. This dataset addressed seven main aspects of technology integration, including demographic profile information, PSTs’ teaching preparation, acceptance and intention to use technology, PSTs' teacher technology skills, level of innovativeness, PSTs' technology integration during teaching practices, and the quality of PSTs’ technology integration.
DOI: 10.17632/4f48833fnr.3
title: Raw Data Developed Model for Factors Affecting Indonesian PSTs’ Technology Integration during teaching practices

description: This dataset's raw data describes the variables that may affect the preservice teachers (PSTs) technology integration during teaching practices. This dataset addressed seven main aspects of technology integration, including demographic profile information, PSTs’ teaching preparation, acceptance and intention to use technology, PSTs' teacher technology skills, level of innovativeness, PSTs' technology integration during teaching practices, and the quality of PSTs’ technology integration.
DOI: 10.17632/w8v54r24t8.2
title: Organosulfates across different seasons in 2015-2016 and 2018-2019 in Shanghai

description: The datasets include the molecular compositions, concentrations, tandem MS measurements, and source apportionment results of organosulfates detected in atmospheric aerosols across different seasons in 2015-2016 and 2018-2019 in Shanghai, China.
DOI: 10.17632/6w2k42kytt.1
title: 2023 CODEX HCC article Segmentation output raw datasets

description: This file contains the Segmentation results by StarDist in Qupath. The analysis method can be found in the manuscript. 
Each TMA contains multiple regions in it. Each region represents a tissue spot in TMA. The clinical information was in HCC401_new.Rdata. Each row in the seg-file represents the information of a single cell, containing the marker intensity, the x and y coordinates, and some other segmentation-related information. 
HCC401_new.Rdata and Qupath cell segmentation ouptut.zip can serve as the input of Part 1 "discovery cohort pre-processing and cell type phenotype definition" in https://github.com/sanrishiguang/ChenleiLab_CODEX_HCC. And the output file of Part 1 with defined cell type/phenotype information was testing_allReg_seurat_._analysis_20220315_AllSubtypes_withoutartifact.csv. 
HCC401_new.Rdata and the output file of Part 1 are provided in https://data.mendeley.com/datasets/km2df7y256/1.
DOI: 10.17632/6smy53nwbx.3
title: Dataset for Smart Charging Strategies for Electric Bus Fleets with Aggregator Support: A Robust Bi-level Optimisation Approach

description: This dataset is part of the thesis "Smart Charging Strategies for Electric Bus Fleets with Aggregator Support: A Robust Bi-level Optimisation Approach", submitted in accordance with the requirements for the degree of Doctor of Philosophy in Sustainable Energy Systems, supervised by Professor Carlos Henggeler Antunes and Professor João Pedro Fernandes Trovão, and presented to the Department of Electrical and Computer Engineering of the Faculty of Sciences and Technology of the University of Coimbra.
DOI: 10.17632/hb2prnkczg.1
title: Long COVID and SCI case-control study dataset

description: Long COVID with SCI data (Case-control study)
DOI: 10.17632/hhxwjkmmgk.1
title: Patterns, Transport, and Anisotropy of Salt Fingers in Shear: Data from Numerical Simulations

description: The numerical work presented here contains a number of simulations pertinent to the evolution of salt fingers in the ocean. These systems exist in the ther- mocline, which has temperature and salinity both decreasing with depth. This repository is intended as a supplement to “Patterns, Transport, and Anisotropy of Salt Figners in Shear,” by Brown and Radko, which has been submitted to the Journal of Physical Oceanography.
DOI: 10.17632/d42d3jstf5.1
title: Dataset for "Stereoanatomy analysis of the early cephalized central nervous system in a marine planarian, Stylochoplana pusilla"

description: Platyhelminthes are a phylum of simple bilaterian invertebrates with prototypic body systems. Compared with non-bilaterians such as cnidarians, the bilaterians are likely to exhibit integrated free-moving behaviors, which require a concentrated nervous system “brain” rather than the distributed nervous system of radiatans. Thus, marine planarians have an early cephalized ‘central’ nervous system compared not only with non-bilaterians but also with those parasitic flatworms or freshwater planarians. Here, we investigated the 3-D structures of the planarian central nervous system by the use of X-ray micro-computed tomography (micro-CT) in a synchrotron radiation facility. We identified, in marine planarians, both an apparent optic chiasm (a well-known feature in vertebrates) and mushroom bodies (prominent in insects). These results suggest that the marine planarian “brain” provides a valuable ‘missing-link brain’ between those of the protostome and deuterostome, especially in the evolutionary aspects of the nervous system.
DOI: 10.17632/pdpg3yzmb6.1
title: LINF_160014800

description: EF-hand domain containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.w5ks95
title: Occurrence Download

description: A dataset containing 189915 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Lybius torquatus (Dumont, 1805))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 189915 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004409-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/n3fry8f4mk.1
title: Impurity Incorporation and Strain Dynamics in Calcite Crystal Growth: In Situ Analysis and Multiscale Chemical-Strain Mapping Dataset

description: Impurity Incorporation and Strain Dynamics in Calcite Crystal Growth: In Situ Analysis and Multiscale Chemical-Strain Mapping Data
DOI: 10.17632/brgzpd5wj4.1
title: Data for Machine Learning-aided Computational Fragment-based Design of Small Molecules for Hypertension Treatment

description: The study sought to develop a machine learning-aided computational drug discovery system to generate new lead drug molecules for hypertension treatment by targeting the renin-angiotensin-aldosterone system (RAAS).
The main agents that act on the RAAS are commonly classified as Angiotensin-Converting Enzyme Inhibitors (ACEIs) or Angiotensin II Receptor Blockers (ARBs), therefore, the objective was to generate new lead ACEIs and ARBs to treat hypertension through the RAAS.

As a result, we developed a seven (7) phase computational fragment-based drug design system aided by machine learning, which guides the process of using existing hypertension molecules as the basis for discovering new hypertension lead (candidate) molecules. 

The output of this study was a dataset of newly generated lead Angiotensin-Converting Enzyme Inhibitor (ACEI) and Angiotensin II Receptor Blocker (ARB) molecules. 

The Input Data folder below contains all the files that were used to generate this dataset, which can be found in the Output Data folder below.
DOI: 10.17632/ytfjzbgby9.1
title: Mediciones hidrodinámicas y fisicoquímicas de la sección interna del Golfo de Nicoya, Costa Rica

description: Mediciones de variables hidrodinámicas y fisicoquímicas realizadas en Marzo y Julio-Agosto de 2022 en la sección interna del Golfo de Nicoya, Costa Rica, por la Unidad de Ingeniería Marítima, de Ríos y de Estuarios (IMARES-UCR) y el Centro de Investigaciones en Limnología y Ciencias del Mar (CIMAR), ambos de la Universidad de Costa Rica. 

Los datos fueron medidos en dos campañas de campo de aproximadamente 2 semanas cada una. La primera campaña se realizó en Marzo de 2022. La segunda campaña se realizó entre finales de Julio y mediados de Agosto 2022. 

La variables medidas son: 
* Batimetría.
* Velocidad y dirección de corrientes en tres puntos fijos de medición.
* Marea en 6 puntos fijos alrededor del sitio de estudio.
* Porcentaje de carbonatos, materia orgánica y arenas en el sedimento de aproximadamente 30 puntos repartidos en toda la sección interna del Golfo de Nicoya.
* Concentración de amonio, clorofila, materia en suspensión, nitratos, nitritos, fosfatos y silicatos en muestras superficiales del agua en aproximadamente 30 puntos de la zona de estudio. 
* Perfiles verticales de concentración de clorofila, turbidez, conductividad, oxígeno disuelto, pH y temperatura del agua en aproximadamente 30 puntos de la zona de estudio. 

Las mediciones se realizaron a través del Fondo Especial de Estímulo a la Investigación 2022, de la Vicerrectoría de Investigación de la Universidad de Costa Rica. 

Los archivos distribuidos consisten en archivos en formato .csv, con un cabecero que resumen algunas de sus características y los datos tabulados con fechas, coordenadas y mediciones. 


***********ENGLISH***********

Hydrodynamics and physico-chemical measurements made in March and July/August 2022 in the inner region of the Gulf of Nicoya, Costa Rica, by the Coastal, Rivers and Estuaries Engineering Unit (IMARES-UCR) and the Limnology and Sea Science Research Center (CIMAR), both from the University of Costa Rica. 

The data was measured during two field campaigns of approximately 2 weeks each. The first one during March 2022. The second one during late July through mid-August 2022. 

The measured data is:
* Bathymetry.
* Water current velocity and direction in 3 fixed study sites. 
* Tide in 6 sites around the study site.
* Carbonate, organic matter and sand percentage in the sediment of approximately 30 sampling points along the study site. 
* Ammonia, chlorophyll, suspended matter, nitrates, nitrites, phosphates, and silicates concentration in surface water samples at approximately 30 sampling points. 
* Vertical profiles of chlorophyll concentration, turbidity, conductivity, dissolved oxygen, pH, and water temperature in approximately 30 sampling points. 

Measurements were made through the Special Research Stimulus Fund 2022 of the Research Vice-rectory of the University of Costa Rica. 

The distributed files are .csv files with a small header with some general characteristics, and the tabulated data with dates, coordenates and measurements.
DOI: 10.17632/68tx52kdz9.1
title: Replication data for article "The Women Empowering Effect of Higher Education"

description: These are the replication files for the paper titled "The Women Empowering Effect of Higher Education":

Elsayed, Ahmed and Shirshikova, Alina (2023). "The women-empowering effect of higher education", Journal of Development Economics, 103101, ISSN 0304-3878, https://doi.org/10.1016/j.jdeveco.2023.103101.

Abstract: We examine the effects of the large-scale construction of public universities in Egypt during the 1960s and 1970s. We found that opening a local university increased the likelihood of obtaining higher education degrees and had long-lasting positive effects on labor market and marriage outcomes, particularly for women. We give insights on internal migration as a channel and show that migration prior to university enrollment age decreased while migration after that age increased as an outcome of university construction. Local universities reduced men’s migration for study and women’s migration for early marriage. The paper highlights the importance of increasing access to higher education for positive social and labor outcomes, particularly for women.

Keywords: Higher education; Universities; Empowerment of women; Egypt
DOI: 10.17632/zwv8zyymbz.1
title: LINF_360047700

description: Eukaryotic translation initiation factor 3 subunit I | eIF3I
Leishmania infantum (strain JPCM5)
DOI: 10.17632/jtg9b74fgg.1
title: LINF_360048000

description: S-adenosylhomocysteine hydrolase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/9mj4dvmbt5.1
title: Potentially massive and global non-pyrogenic production of condensed “black” carbon through biomass oxidation

description: Ultrahigh resolution mass spectrometry (FT-ICR-MS) data for base-extracted organic matter from iron-oxidized pine wood samples and corresponding controls. Full materials and methods, as well as interpretations, can be found in the corresponding manuscript (citation and DOI below). 

Manuscript in review. This will be updated once it has been published.
DOI: 10.17632/73972s5dpx
title: Electrically Evoked In Vitro (Rat) Retinal Neural Responses Using Large (500 um) Stimulating Electrodes (ARCHIVE 2/2)

description: For details, please see the archive: Electrically Evoked In Vitro (Rat) Retinal Neural Responses Using Large (500 um) Stimulating Electrodes (ARCHIVE 1/2) (DOI: 10.17632/g4tbw5kfh9.1)
DOI: 10.17632/73972s5dpx.1
title: Electrically Evoked In Vitro (Rat) Retinal Neural Responses Using Large (500 um) Stimulating Electrodes (ARCHIVE 2/2)

description: For details, please see the archive: Electrically Evoked In Vitro (Rat) Retinal Neural Responses Using Large (500 um) Stimulating Electrodes (ARCHIVE 1/2) (DOI: 10.17632/g4tbw5kfh9.1)
DOI: 10.17632/pybn6gb2m6.1
title: Ranking Building Design and Operation Parameters for Residential Heating Demand Forecasting with Machine Learning - ASSOCIATED RESEARCH DATA

description: The results of the 24 machine-learning models are presented in this dataset. The spreadsheets display the results of the three algorithms, both with optimized parameters and with default settings. The first spreadsheet pertains to the Random Forest results, the second to XGBoost, and the third to Extra Trees.
DOI: 10.17632/pybn6gb2m6.2
title: Ranking Building Design and Operation Parameters for Residential Heating Demand Forecasting with Machine Learning - ASSOCIATED RESEARCH DATA

description: The results of the 24 machine-learning models are presented in this dataset. The spreadsheets display the results of the three algorithms, both with optimized parameters and with default settings. The first spreadsheet pertains to the Random Forest results, the second to XGBoost, and the third to Extra Trees.
DOI: 10.17632/bpm44y65vm.1
title: LINF_160022700

description: Flagellar Member 3 | FLAM3; Leishmania infantum (strain JPCM5)
DOI: 10.17632/5r6rjmxxzp.1
title: LINF_160018400

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/fjmcvks422.1
title: LINF_160022500

description: Tetratricopeptide repeat-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/f2jg98mn4x.1
title: Social Integration and Salivary Cortisol in Chinese Older Adults in Shanghai

description: Dataset of findings reported in a manuscript submitted to the International Journal of Molecular Sciences. The paper aims to examine the potential mediating effect of social embeddedness on the relationship between the motivation to cultivate social ties (Network Cultivation) and Cortisol Dynamic Range in a sample of Chinese older adults in Shanghai.
DOI: 10.17632/78twxyc57h.1
title: LINF_360048900

description: hslVU complex proteolytic subunit - threonine peptidase - Clan T(1) - family T1B | HslV
Leishmania infantum (strain JPCM5)
DOI: 10.17632/zdx9nyhz65.1
title: Conductivity studies of DTAB in the presence of MR with menthanol-water system

description: Conductance against Concentration
DOI: 10.17632/ds3mwc5nsw.1
title: LINF_360049500

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/sw7g3yypx9.1
title: Preparation of flaky CoxNiy and surface oxidation for tunable electromagnetic parameters and wave absorption properties

description: SEM images of CoxNiy alloy particles including size of particles, thickness, and width of flaky particles.
DOI: 10.17632/ptdwzvwcz7.1
title: LINF_360049200

description: PEX3
Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.tepxep
title: Occurrence Download

description: A dataset containing 2255 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Conolophus subcristatus (Gray, 1831)"
 ]
}

 The dataset includes 2255 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004429-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/mx7spwyjs7.1
title: LINF_360049400

description: deglutamylase CCP5B
Leishmania infantum (strain JPCM5)
DOI: 10.17632/n8hggjyjs2.1
title: Exploring the variations in ambient BTEX in urban Europe and its environmental health implications

description: The data is coupled with the measurement report titled “Exploring the variations in ambient BTEX in urban Europe and its environmental health implications”. A preprint has been posted based on this dataset, as cited follows. 
Liu, X., Zhang, X., Dufresne, M., Wang, T., Wu, L., Lara, R., Seco , ., Monge, M., Yáñez-Serrano, A. M., Gohy, M., Petit, P., Chevalier, A., Vagnot, M.-P., Fortier, Y., Baudic, A., Ghersi, V., Gille, G., Lanzi, L., Gros, V., Simon, L., Hellen, H., Reimann, S., Bras, Z. L., Müller, M. J., Beddows, D., Hou, S., Shi, Z., Harrison, R. M., Bloss, W., Dernie, J., Sauvage, S., Hopke, P. K., Duan, X., An, T., Lewis, A., Hopkins, J., Liakakou, E., Mihalopoulos, N., Zhang, X., Alastuey, A., Querol, X., and Salameh, T.: Exploring the variations in ambient BTEX in urban Europe and its environmental health implications, EGUsphere [preprint], https://doi.org/10.5194/egusphere-2024-2309, 2024.
DOI: 10.17632/vr37vj22s5.2
title: Skin barrier fine-tuning through low-temperature lipid chain transition

description: The lipids in the mammalian stratum corneum (SC) adopt an unusually rigid arrangement to form a vital barrier preventing water loss and harmful environmental impacts. Just above the physiological temperature, a subset of barrier lipids undergoes a phase transition from a very tight orthorhombic to a looser hexagonal arrangement and vice versa. The purpose of this lipid transition in skin physiology is unknown. Permeability experiments on isolated human SC indicated that the transition affects the activation energy for a model compound that prefers lateral movement along lipid layers but not for water or a large polymer that would cross the SC via the pore pathway. The orthorhombic phase content of SC lipids, as determined by infrared spectroscopy, was also modulated by (de)hydration. Spontaneous rearrangement of human SC lipid monolayers into 10 nm higher multilamellar islets at 32 – 37°C, but not at room temperature, was revealed by atomic force microscopy. Our findings add to our knowledge of fundamental skin physiology suggesting a fine temperature- and hydration-controlled switch from fluid lipids required for lipid barrier assembly to rigid and tightly packed lipids in the mature SC necessary for the water and permeability barriers.
DOI: 10.17632/vr37vj22s5.1
title: Skin barrier fine-tuning through low-temperature lipid chain transition

description: The lipids in the mammalian stratum corneum (SC) adopt an unusually rigid arrangement to form a vital barrier preventing water loss and harmful environmental impacts. Just above the physiological temperature, a subset of barrier lipids undergoes a phase transition from a very tight orthorhombic to a looser hexagonal arrangement and vice versa. The purpose of this lipid transition in skin physiology is unknown. Permeability experiments on isolated human SC indicated that the transition affects the activation energy for a model compound that prefers lateral movement along lipid layers but not for water or a large polymer that would cross the SC via the pore pathway. The orthorhombic phase content of SC lipids, as determined by infrared spectroscopy, was also modulated by (de)hydration. Spontaneous rearrangement of human SC lipid monolayers into 10 nm higher multilamellar islets at 32 – 37°C, but not at room temperature, was revealed by atomic force microscopy. Our findings add to our knowledge of fundamental skin physiology suggesting a fine temperature- and hydration-controlled switch from fluid lipids required for lipid barrier assembly to rigid and tightly packed lipids in the mature SC necessary for the water and permeability barriers.
DOI: 10.17632/m6rd76bsnc.2
title: Prediction of the first-pass metabolism of a drug after oral intake based on structural parameters and physicochemical properties

description: All of the data associated with analyzing the descriptors, developing equations and modeling, and validation the models of the research project entitled "Prediction of the first-pass metabolism of a drug after oral intake based on structural parameters and physicochemical properties"
DOI: 10.17632/gfk5wmzzhc.1
title: Dataset for daily CTmax measurements in tadpoles

description: Results of daily CTmax measurements in tadpoles of three tropical anuran species