cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.35077/act-bad
title: Neuron Morphology data in .swc format from Patch-seq experiments in mouse cortex, Cell ID 992386952

description: Mouse cortical neurons display diverse morphology, physiology and gene expression profiles. We use a method called Patch-seq, where these three data modalities are assayed simultaneously from the same neuron, to understand how the genetic profile of mouse cortical neuron types corresponds to their morphological and electrophysiological phenotypes. This collection may contain image stacks (TIFF), reconstruction files in image space (.swc, µm), a transformed file (.swc, µm) oriented so that the y axis extends vertically towards the pia surface, and a marker file (.marker, µm) indicating nodes where dendrites were truncated (10), reconstruction was not continued (20), or surface of tissue was closest to soma (30).
description: manual tracing
description: DATASET METADATA: title:'Neuron Morphology data in .swc format from Patch-seq experiments in mouse cortex, Cell ID 992386952', GeneralModality:'cell morphology', Technique:'PATCH-Seq' SPECIMEN METADATA: LocalID:'992386952.0', Species:'mouse', NCBITaxonomy:'NCBI:txid10090', SampleLocalID:'992386952.0', Locations:'VISl1' INSTRUMENT METADATA: MicroscopeType:'NA', MicroscopeManufacturerAndModel:'NA' IMAGE METADATA: xAxis:'NA', yAxis:'NA', zAxis:'NA', stepSizeX:'0.114', stepSizeY:'0.114', stepSizeZ:'0.28'
DOI: 10.3886/e116841v1-131792
title: Data and Code for The Transmission of Monetary Policy Shocks

description: Replication package (data & code) for "The Transmission of Monetary Policy Shocks" by Silvia Miranda-Agrippino & Giovanni Ricco<br><br>Abstract: Commonly used instruments for the identification of monetary policy disturbances are likely to combine the true policy shock with information about the state of the economy due to the information disclosed through the policy action. We show that this signalling effect of monetary policy can give rise to the empirical puzzles reported in the literature, and propose a new high-frequency instrument for monetary policy shocks that accounts for informational rigidities. We find that a monetary tightening is unequivocally contractionary, with deterioration of domestic demand, labor and credit market conditions, as well as of asset prices and agents’ expectations.<br><br>
DOI: 10.25934/pr00004829.1
title: Available IPD datapackage for study 'A Double-blind, Placebo-controlled, Parallel-Group Study to Evaluate the Efficacy and Safety of JNS001 in Adults With Attention-Deficit/Hyperactivity Disorder at Doses of 18 mg, 36 mg, 54 mg, or 72 mg Per Day'

description: The main purpose of this study is to evaluate the efficacy of JNS001 titrated to daily doses of 18 to 72 mg in adults with attention-deficit hyperactivity disorder (ADHD) relative to placebo.
DOI: 10.5281/zenodo.7535606
title: Intellectual Capital Datasets

description: These four datasets form the bulk of the data used drawn on in <em>Intellectual Capital,</em> a financial and academic history of St John's College, Oxford, by Matthew Ford (published in 2023). Some data has not been included to comply with data protection legislation or because it is proprietary.
DOI: 10.5281/zenodo.7535605
title: Intellectual Capital Datasets

description: These four datasets form the bulk of the data used drawn on in <em>Intellectual Capital,</em> a financial and academic history of St John's College, Oxford, by Matthew Ford (published in 2023). Some data has not been included to comply with data protection legislation or because it is proprietary.
DOI: 10.6073/pasta/f001df639654c00af77f39ff7e98636f
title: Datasets for: A Global Review of Pyrosomes: Shedding light on the ocean’s elusive gelatinous ‘fire-bodies’

description: These are the datasets used to create all figures included in: Lilly et al. (in review). A Global Review of Pyrosomes: Shedding light on the ocean’s elusive gelatinous ‘fire-bodies’. The review presents a comprehensive global description of the body of current knowledge on pyrosomes, a zooplanktonic tunicate taxon closely related to salps, doliolids, and appendicularians. For review analyses, we used pyrosome observations and associated information from literature-published studies, the BCO-DMO Jellyfish Database Initiative (JeDI; Condon et al., 2014; https://www.bco-dmo.org/dataset/526852), the NOAA COPEPOD Urochordates database (NOAA, 2022; https://www.st.nmfs.noaa.gov/copepod/atlas/html/taxatlas_4350000.html), MODIS-AQUA chlorophyll-a (Melin, 2013; https://data.jrc.ec.europa.eu/dataset/d6f9abd9-777c-4a0c-a5f7-669612f83307), and NOAA Optimal Interpolation sea surface temperature (NOAA Office of Satellite and Product Operations; https://www.psl.noaa.gov/data/gridded/data.noaa.oisst.v2.html). This metadata record and associated files are the subset, adjusted files we used from each of those databases. We include a two-part MATLAB script that can be run to reproduce all figures in the manuscript. Figures include: 1) Locations of all pyrosome observations, from literature studies, JeDI, and COPEPOD; 2) Temperature and chlorophyll-a 'habitat envelopes' for pyrosome observations. Note that we plot separate envelopes: i) JeDI+COPEPOD observations versus NOAA OISST and MODIS-AQUA Chl-a, and ii) literature observations versus their corresponding measured in situ temperature and chlorophyll-a values; 3) Depths and DVM distances of pyrosome observations from JeDI and literature studies; S1) Number of pyrosome 'Presence' samples compared to total sampling effort from the COPEPOD database; and S2) Densities of pyrosome colonies in observations from COPEPOD and literature studies.
DOI: 10.22003/xfel.eu-data-900281-00
title: SASE2 Instrumentation Commissioning
DOI: 10.22003/xfel.eu-data-900282-00
title: SASE2 Photon Beam Measurements
DOI: 10.22003/xfel.eu-data-900283-00
title: SASE3 Instrumentation Commissioning
DOI: 10.22003/xfel.eu-data-900284-00
title: SASE1 Photon Beam Measurements
DOI: 10.22003/xfel.eu-data-900304-00
title: SQS commissioning
DOI: 10.22003/xfel.eu-data-900306-00
title: SASE3 Photon Beam Measurements
DOI: 10.22003/xfel.eu-data-900307-00
title: SASE1 Instrumentation Commissioning
DOI: 10.22003/xfel.eu-data-900311-00
title: LASLAB R&D
DOI: 10.22003/xfel.eu-data-900317-00
title: SPB/SFX MHz Microscopy Commissioning
DOI: 10.7281/t1/ifsxnv/dygpdx
title: 4. ipcai_2020_ds_2x.zip

description: Pre-processed 2D dataset with annotations that may be used to train/test models. Downsampled by 2x.
DOI: 10.7281/t1/ifsxnv/hnv0zm
title: 7. ipcai_2020_ds_16x.zip

description: Pre-processed 2D dataset with annotations that may be used to train/test models. Downsampled by 16x.
DOI: 10.7281/t1/ifsxnv/rm0ybv
title: 6. ipcai_2020_ds_8x.zip

description: Pre-processed 2D dataset with annotations that may be used to train/test models. Downsampled by 8x. This dataset was used in the IPCAI/IJCARS paper for model training/testing.
DOI: 10.7281/t1/ifsxnv/sborqa
title: 5. ipcai_2020_ds_4x.zip

description: Pre-processed 2D dataset with annotations that may be used to train/test models. Downsampled by 4x.
DOI: 10.7281/t1/ifsxnv/17uzyl
title: 1. Readme.txt

description: Detailed description of the files provided in this archive.
DOI: 10.7281/t1/ifsxnv/dezwk8
title: 2. DeepFluoroLabeling-IPCAI2020-2020.03.17.zip

description: Snapshot of training/testing code along with documentation of the organization within each HDF5 data file.
DOI: 10.7281/t1/ifsxnv/ean9gh
title: 3. ipcai_2020_full_res_data.zip

description: Full-resolution dataset with 2D and 3D annotations. Needs additional pre-processing before training/testing.
DOI: 10.6073/pasta/7e8de8f8dafa1d2e9a10c8e157824a47
title: High-marsh epifauna densities within references and ice-rafted sediment deposits, Rowley, MA.

description: Following a historic bomb cyclone (Winter Storm Grayson) in January of 2018, a large volume of ice-rafted sediment was patchily deposited on the surface of salt marshes in the Great Marsh, MA. In May of 2018, twenty patches of ice-rafted sediments and paired reference sites (i.e., no sediment deposition) were delineated. In May 2018, August 2018, and August 2019, samples were collected to examine how ice-rafted sediments affected vegetation, infauna, and epifauna recovery over time. This specific dataset focuses on epifauna species counts, with the primary species including: Melampus bidentatus, Littorophiloscia vittata, and Orchestia grillus. This dataset is complete and please see our publication (https://doi.org/10.1007/s12237-021-01023-z) for more information.
DOI: 10.6084/m9.figshare.3761562.v2457
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.21899361.v1
title: MarineCyanophageHostGenes

description: These fasta files contain the reference sequences for the phylogenetic trees created in “Associations between picocyanobacterial ecotypes and cyanophage host genes across ocean basins and depth” by Clara A. Fuchsman, David Garcia-Prieto, Matthew D. Hays, Jacob A. Cram from the University of Maryland Center for Environmental Science Horn Point Laboratory. The reference sequences are a combination of sequences downloaded from NCBI, and proteins/genes from assembled contigs from the ETNP, HOT viromes and BioGeotraces (Fuchsman <em>et al.</em>, 2017; Biller <em>et al.</em>, 2018; Luo <em>et al.</em>, 2020).
DOI: 10.6084/m9.figshare.21899361
title: MarineCyanophageHostGenes

description: These fasta files contain the reference sequences for the phylogenetic trees created in “Associations between picocyanobacterial ecotypes and cyanophage host genes across ocean basins and depth” by Clara A. Fuchsman, David Garcia-Prieto, Matthew D. Hays, Jacob A. Cram from the University of Maryland Center for Environmental Science Horn Point Laboratory. The reference sequences are a combination of sequences downloaded from NCBI, and proteins/genes from assembled contigs from the ETNP, HOT viromes and BioGeotraces (Fuchsman <em>et al.</em>, 2017; Biller <em>et al.</em>, 2018; Luo <em>et al.</em>, 2020).
DOI: 10.5281/zenodo.7535628
title: Analysed Tweets Brexit

description: The analysed tweets I used in my Brexit Twitter research project.
DOI: 10.5281/zenodo.7535627
title: Analysed Tweets Brexit

description: The analysed tweets I used in my Brexit Twitter research project.
DOI: 10.5517/ccdc.csd.cc228h95
title: CCDC 1914786: Experimental Crystal Structure Determination

description: Related Article: Ligia R. Gomes, John N Low, James L. Wardell|2023|J.Mol.Struct.|1277|134860|doi:10.1016/j.molstruc.2022.134860
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc22d1xg
title: CCDC 1918215: Experimental Crystal Structure Determination

description: Related Article: Ligia R. Gomes, John N Low, James L. Wardell|2023|J.Mol.Struct.|1277|134860|doi:10.1016/j.molstruc.2022.134860
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6073/pasta/8254e4f601760d58fa26e1dce0b32007
title: High-marsh infauna densities within references and ice-rafted sediment deposits, Rowley, MA.

description: Following a historic bomb cyclone (Winter Storm Grayson) in January of 2018, a large volume of ice-rafted sediment was patchily deposited on the surface of salt marshes in the Great Marsh, MA. In May of 2018, twenty patches of ice-rafted sediments and paired reference sites (i.e., no sediment deposition) were delineated. In May 2018, August 2018, and August 2019, samples were collected to examine how ice-rafted sediments affected vegetation, infauna, and epifauna recovery over time. This specific dataset focuses on infauna species counts, with the primary species including: mites, Manayunkia aestuarina, and Cernosvitotviella immota. This dataset is complete and please see our publication (https://doi.org/10.1007/s12237-021-01023-z) for more information.
DOI: 10.15482/usda.adc/1528425
title: Alfalfa flux footprint experiment 2021

description: Four eddy-covariance (EC) sensors were deployed at two heights upwind and within alfalfa plot trials at San Joaquin Valley Ag Science Center.  The purpose of the experiment was to evaluate the robustness of flux footprint models under different atmospheric stability conditions.  At each of the two locations, an EC sensor was mounted at an unconventionally low height (~1 meter) and a second at a more typical height (~2.5 m).  Supplementary sensors were co-located to measure net radiation, soil heat flux, and other parameters necessary to evaluate closure of the surface energy budget.  The southeast station was located at the downwind edge of  a 2 acre plot trial of irrigated alfalfa, arranged in small blocks.  The upwind fetch (with respect to predominant day time wind direction) included less than 100 meters of semi-homogeneous conditions.  Soil sensors were duplicated across the alfalfa blocks and inter-block alleys which were irrigated but not planted.  The northwest station was located approximately 25 meters upwind of the irrigated alfalfa plot trials in fallow, non-irrigated bare field.
Raw 10 Hz infrared gas analyzer and sonic anemometer data, and 30 minute averaged data from other sensors are provided.
Resources in this dataset:


Title: Data dictionary for SEB files from southeast station (in zipped folder)
Filename: ALF2021_SEBSE_header.csv
Description: Contains variable names, description of sensors, units, and required metadata for each variable.


Title: Data dictionary for SEB files from northwest station (zipped folder)
Filename: ALF2021_SEBNW_header.csv
Description: Contains variable names, description of sensors, units, and required metadata for each variable.


Title: Data dictionary for EC files from SE station (zipped folder)
Filename: ALF2021_ECSE_header.csv
Description: Contains variable names, description of sensors, units, and required metadata for each variable.


Title: Data dictionary for EC files from NW station (zipped folder)
Filename: ALF2021_ECNW_header.csv
Description: Contains variable names, description of sensors, units, and required metadata for each variable.


Title: SJVASC Alfalfa 2021- NW station
Filename: EC2_alfNW.zip


Title: SJVASC Alfalfa 2021- SE station
Filename: EC2_alfSE.zip
DOI: 10.6073/pasta/0271d3cf75d88575d22f3b4027a0fde1
title: Length, width, perimeter, and sediment thickness of ice-rafted sediment deposits, Rowley, MA.

description: Following a historic bomb cyclone (Winter Storm Grayson) in January of 2018, a large volume of ice-rafted sediment was patchily deposited on the surface of salt marshes in the Great Marsh, MA. In May of 2018, twenty patches of ice-rafted sediments and paired reference sites (i.e., no sediment deposition) were delineated. In May 2018, August 2018, and August 2019, samples were collected to examine how ice-rafted sediments affected vegetation, infauna, and epifauna recovery over time. This specific dataset focuses on the length, width, perimeter, and sediment thickness measurements of each ice-rafted sediment deposit. This dataset is complete and please see our publication (https://doi.org/10.1007/s12237-021-01023-z) for more information.
DOI: 10.34740/kaggle/dsv/4849021
title: Egypt Gold Prices | Daily Updated
DOI: 10.5281/zenodo.7531155
title: Hydrogeophysical Data Spiekeroog, ERT DP

description: Hydrogeophysical dataset of Spiekeroog (2019, 2021) including electrical resistivity tomography (ERT) and Direct Push (DP) results.
DOI: 10.5281/zenodo.7531154
title: Hydrogeophysical Data Spiekeroog, ERT DP

description: Hydrogeophysical dataset of Spiekeroog (2019, 2021) including electrical resistivity tomography (ERT) and Direct Push (DP) results.
DOI: 10.26093/cds/vizier.36490039
title: xCOLD GASS and xGASS. Metallicity gradients

description: VizieR online Data Catalogue associated with article published in journal Astronomy & Astrophysics with title 'xCOLD GASS and xGASS: Radial metallicity gradients and global properties on the star-forming main sequence.' (bibcode: 2021A&A...649A..39L)
DOI: 10.5281/zenodo.7535620
title: Projected Smoke Impacts from Increased Prescribed Fire Activity (PHIRE) Smoke Modeling Datasets

description: This dataset support the publication, Kramer et al., 2023, submitted to JGR: Atmospheres on 01-13-2023 This project was supported by a grant from the CAL FIRE Forest Health Research Program (Agreement #8GG19803), as part of California Climate Investments. California Climate Investments is a statewide program that puts billions of Cap-and-Trade dollars to work reducing greenhouse gas emissions, strengthening the economy, and improving public health and the environment—particularly in disadvantaged communities. This study has not been reviewed by the funding agency and may not represent their opinion and interpretation of the findings. We also would like to acknowledge all participating organizations in the PHIRE team: The California Department of Public Health- Sumi Hoshiko; The Sequoia Foundation- Jeff Sanchez; U.S. EPA- Ana G. Rappold; Michigan Technological University- Nancy French; the U.S. Forest Service- Leland Tarnay; and Sonoma Technology- Fred Lurmann, ShihMing Huang, Samantha J. Kramer, Crystal McClure, and Melissa Chaveste. Beyond the authors of this publication, we would also like to acknowledge Sonoma Technology team members Kenneth J. Craig and Anondo Mukherjee for their contributions.
DOI: 10.6084/m9.figshare.21682532.v2
title: input_figS5_C

description: This dataset contains data used to generate panel S5C in a preprint manuscript from the Misteli Lab at the National Cancer Institute/NIH. Title: Activation of endoplasmic reticulum stress in premature aging via the inner nuclear membrane protein SUN2 Authors: Vidak, Sandra; Serebryannyy, Leonid A.; Pegoraro, Gianluca; Misteli, Tom Link: https://www.biorxiv.org/content/10.1101/2021.09.14.460295v2 DOI: https://doi.org/10.1101/2021.09.14.460295
DOI: 10.34703/gzx1-9v95/hk3ejk/adblsi
title: Landcover2021.zip

description: :unav
DOI: 10.34703/gzx1-9v95/hk3ejk/vfd2ft
title: Landcover2021.zip

description: Data for Version 2.0, upload January 2023
DOI: 10.6084/m9.figshare.21682745.v2
title: input_figS5_D

description: This dataset contains data used to generate panel S5D in a preprint manuscript from the Misteli Lab at the National Cancer Institute/NIH. Title: Activation of endoplasmic reticulum stress in premature aging via the inner nuclear membrane protein SUN2 Authors: Vidak, Sandra; Serebryannyy, Leonid A.; Pegoraro, Gianluca; Misteli, Tom Link: https://www.biorxiv.org/content/10.1101/2021.09.14.460295v2 DOI: https://doi.org/10.1101/2021.09.14.460295
DOI: 10.5281/zenodo.7534138
title: Appendix A: Websites Reviewed

description: Appendix A from the PhD thesis, 'Making digital history: The impact of digitality on public participation and scholarly practices in historical research' https://oro.open.ac.uk/45519/ This dataset underpinned the following sections of the thesis very directly: Chapter 1 provides an overview of over 400 digital history projects aimed at engaging the public or collecting, creating or enhancing records about historical materials for scholarly and general audiences. Chapter 2 discusses design factors that may influence the success of crowdsourcing projects. Following this, Chapter 3 explores the ways in which some crowdsourcing projects encourage deeper engagement with history or science, and the role of communities of practice in citizen history.
DOI: 10.5281/zenodo.7534139
title: Appendix A: Websites Reviewed

description: Appendix A from the PhD thesis, 'Making digital history: The impact of digitality on public participation and scholarly practices in historical research' https://oro.open.ac.uk/45519/ This dataset underpinned the following sections of the thesis very directly: Chapter 1 provides an overview of over 400 digital history projects aimed at engaging the public or collecting, creating or enhancing records about historical materials for scholarly and general audiences. Chapter 2 discusses design factors that may influence the success of crowdsourcing projects. Following this, Chapter 3 explores the ways in which some crowdsourcing projects encourage deeper engagement with history or science, and the role of communities of practice in citizen history.
DOI: 10.5281/zenodo.7531951
title: MUSES Fractional Vegetation Coverage (FVC) 8-Day Global 250m SIN Grid in 2011 (001–177)

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global FVC product at 250m spatial resolution and 8-day temporal resolution. The MUSES FVC product is provided on a Sinusoidal grid and spans from 2000 to 2019 (continuously updated). It was generated from the MUSES LAI product at 250m resolution and other ancillary information using the complement to unity of the transmittance of light through the entire canopy in the nadir viewing direction (Xiao <em>et al</em>., 2016). The MUSES FVC values are physically consistent with the corresponding MUSES LAI values. The MUSES FVC product is spatially complete and temporally continuous. This dataset is the MUSES FVC product in 2011 (001–177). <em>Please <strong><em>click</em> here</strong> to download the MUSES FVC product <strong>in 2010 (185–361)</strong></em>, and <em><strong>click here</strong> to download the MUSES FVC product <strong>in 2011 (185–361</strong></em><em><strong>)</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2011 (001–177) Spatial Resolution: 250m Temporal Resolution: 8 days Projection: Sinusoidal Data Format: HDF Scale: 0.01 Valid Range: 0 – 100 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et a</em>l. (2016). Estimating the Fractional Vegetation Cover from GLASS Leaf Area Index Product. <em>Remote Sensing</em>, 8, 337. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).