cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22696348
title: Ruminal bacterial dataset from observational study on ruminal acidosis

description: Dataset containing descriptive, acidosis risk, and center log transformed relative abundance of ruminal bacterial phyla and families data from 287 cows from 36 farms. The study was an observational study with a rumen sample collected via stomach within 3 hours of feeding. The key dietary nutrients from each farm are also provided. <br> The full paper is submitted to Froniters in Micorbiomes Golder, H., J., Rehberger, J., Smith, A., Block, E., and Lean, I. (Submitted). Ruminal bacterial communities differ in early lactation dairy cows with differing risk of ruminal acidosis. Frontiers in Microbiomes. <br> Companion papers include: Golder, H., LeBlanc, S., Duffield, T., Rossow, H., Bogdanich, R., Hernandez, L., et al. (2023). Characterizing ruminal acidosis risk: A multiherd, multicountry study. J. Dairy Sci. 106. doi: https://doi.org/10.3168/jds.2022-22571. <br> Golder, H., Thomson, J., Rehberger, J., Smith, A., Block, E., and Lean, I. (2023). Associations among the genome, rumen metabolome, ruminal bacteria, and milk production in early-lactation Holsteins. J. Dairy Sci. 106. doi: https://doi.org/10.3168/jds.2022-22573.
DOI: 10.5517/ccdc.csd.cc2clf2h
title: CCDC 2192446: Experimental Crystal Structure Determination

description: Related Article: Badma N. Mankaev, Valeriia A. Serova, Mikhail A. Syroeshkin, Anna Ya. Akyeva, Alexey V. Sobolev, Andrei V. Churakov, Elmira Kh. Lermontova, Mikhail E. Minyaev, Yury F. Oprunenko, Maxim V. Zabalov, Kirill V. Zaitsev, Galina S. Zaitseva, Sergey S. Karlov|2023|Eur.J.Inorg.Chem.|26|e202200690|doi:10.1002/ejic.202200690
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2clf3j
title: CCDC 2192447: Experimental Crystal Structure Determination

description: Related Article: Badma N. Mankaev, Valeriia A. Serova, Mikhail A. Syroeshkin, Anna Ya. Akyeva, Alexey V. Sobolev, Andrei V. Churakov, Elmira Kh. Lermontova, Mikhail E. Minyaev, Yury F. Oprunenko, Maxim V. Zabalov, Kirill V. Zaitsev, Galina S. Zaitseva, Sergey S. Karlov|2023|Eur.J.Inorg.Chem.|26|e202200690|doi:10.1002/ejic.202200690
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.26188/22272769.v1
title: Dataset for "Time Since Fire Shapes Plant Immaturity Risk Across Fire Severity Classes"

description: This dataset was collected analysed for use in the manuscript below: <br> Plumanns-Pouton, E.; Swan, Matthew; Penman, Trent; Collins, Luke; Kelly, Luke, 2023, "Time since fire shapes plant immaturity risk across fire severity classes", Fire Ecology, 19, 25, DOI: 10.1186/s42408-023-00185-4 <br> <strong>Below we list the rules for use of the Fire severity reproductive maturity data: </strong> If you would like to use this data, we request that you: Notify the addresses of correspondence (ellap@student.unimelb.edu.au ) if you plan to use the database in analyses, models or publications. Provide recognition of the efforts of this group in collecting the data by using the citations for the database and associated manuscript above.
DOI: 10.26188/22272769
title: Dataset for "Time Since Fire Shapes Plant Immaturity Risk Across Fire Severity Classes"

description: This dataset was collected analysed for use in the manuscript below: <br> Plumanns-Pouton, E.; Swan, Matthew; Penman, Trent; Collins, Luke; Kelly, Luke, 2023, "Time since fire shapes plant immaturity risk across fire severity classes", Fire Ecology, 19, 25, DOI: 10.1186/s42408-023-00185-4 <br> <strong>Below we list the rules for use of the Fire severity reproductive maturity data: </strong> If you would like to use this data, we request that you: Notify the addresses of correspondence (ellap@student.unimelb.edu.au ) if you plan to use the database in analyses, models or publications. Provide recognition of the efforts of this group in collecting the data by using the citations for the database and associated manuscript above.
DOI: 10.5281/zenodo.7865395
title: Rayleigh Inlists and Checkpoints for Effects of Full Sphere Convection On M-Dwarf Dynamo Action, Flux Emergence, and Spin-Down

description: Input files, checkpoints, and summary data for the three primary Rayleigh global convection simulations highlighted in Bice & Toomre 2023b, <em>Effects of Full Sphere Convection On M-Dwarf Dynamo Action, Flux Emergence, and Spin-Down</em>.
DOI: 10.5281/zenodo.7865394
title: Rayleigh Inlists and Checkpoints for Effects of Full Sphere Convection On M-Dwarf Dynamo Action, Flux Emergence, and Spin-Down

description: Input files, checkpoints, and summary data for the three primary Rayleigh global convection simulations highlighted in Bice & Toomre 2023b, <em>Effects of Full Sphere Convection On M-Dwarf Dynamo Action, Flux Emergence, and Spin-Down</em>.
DOI: 10.6084/m9.figshare.22696405
title: AP2-132_19-24_FC1-p05_pvaluemut.csv

description: redacted
DOI: 10.6084/m9.figshare.22696405.v1
title: AP2-132_19-24_FC1-p05_pvaluemut.csv

description: redacted
DOI: 10.5281/zenodo.7857422
title: MUSES Fractional Vegetation Coverage (FVC) 8-Day Global 500m SIN Grid in 2002

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global FVC product at 500m spatial resolution and 8-day temporal resolution. The MUSES FVC product is provided on a Sinusoidal grid and spans from 2000 to 2018 (continuously updated). It was generated from the MUSES LAI product at 500m resolution and other ancillary information using the complement to unity of the transmittance of light through the entire canopy in the nadir viewing direction (Xiao <em>et al</em>., 2016). The MUSES FVC values are physically consistent with the corresponding MUSES LAI values. The MUSES FVC product is spatially complete and temporally continuous. This dataset is the MUSES FVC product in 2002. <em>Please <strong>click here</strong> to download the MUSES FVC product <strong>in 2001</strong></em>, and <em><strong>click here</strong> to download the MUSES FVC product <strong>in 2003</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2002 Spatial Resolution: 500m Temporal Resolution: 8 days Projection: Sinusoidal Data Format: HDF Scale: 0.004 Valid Range: 0 – 250 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et a</em>l. (2016). Estimating the Fractional Vegetation Cover from GLASS Leaf Area Index Product. <em>Remote Sensing</em>, 8, 337. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).
DOI: 10.5281/zenodo.7857421
title: MUSES Fractional Vegetation Coverage (FVC) 8-Day Global 500m SIN Grid in 2002

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global FVC product at 500m spatial resolution and 8-day temporal resolution. The MUSES FVC product is provided on a Sinusoidal grid and spans from 2000 to 2018 (continuously updated). It was generated from the MUSES LAI product at 500m resolution and other ancillary information using the complement to unity of the transmittance of light through the entire canopy in the nadir viewing direction (Xiao <em>et al</em>., 2016). The MUSES FVC values are physically consistent with the corresponding MUSES LAI values. The MUSES FVC product is spatially complete and temporally continuous. This dataset is the MUSES FVC product in 2002. <em>Please <strong>click here</strong> to download the MUSES FVC product <strong>in 2001</strong></em>, and <em><strong>click here</strong> to download the MUSES FVC product <strong>in 2003</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2002 Spatial Resolution: 500m Temporal Resolution: 8 days Projection: Sinusoidal Data Format: HDF Scale: 0.004 Valid Range: 0 – 250 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et a</em>l. (2016). Estimating the Fractional Vegetation Cover from GLASS Leaf Area Index Product. <em>Remote Sensing</em>, 8, 337. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).
DOI: 10.26180/22696399
title: Soundscape Classification.zip

description: Numeric data, R code, and supervised classification model used in: <br> Fleming, G. M., ElQadi, M. M., Taruc, R. R., Tela, A., Duffy, G. A., Ramsay, E. E., Faber, P. A., & Chown, S. L. (2023). Classification and ecological relevance of soundscapes in urban informal settlements. <em>People and Nature</em>, 5, 742– 757. https://doi.org/10.1002/pan3.10454
DOI: 10.6084/m9.figshare.22567048.v1
title: Date file 1.CSV For Fig.2

description: Reflective spectra of NIR-μFBGs for 30 seconds inscription time.
DOI: 10.6084/m9.figshare.22567093.v1
title: Date file 2.CSV

description: Bending response for three sizes of NIR-μFBG and single-mode FBG
DOI: 10.6084/m9.figshare.22567096.v1
title: Date file 3.CSV

description: Responses to the tension of two sizes of NIR-μFBG and single-mode FBG
DOI: 10.6084/m9.figshare.22567102.v1
title: Date file 4.CSV

description: Temperature response for (a) 3 µm NIR- FBG or (b) 7 and 11 µm NIR- FBG ; (c) Three sizes of NIR-μFBG spectral variation versus the RI change; (d) The wavelength stability of NIR-μFBG in water at the different temperatures.
DOI: 10.6084/m9.figshare.22567048
title: Date file 1.CSV For Fig.2

description: Reflective spectra of NIR-μFBGs for 30 seconds inscription time.
DOI: 10.5281/zenodo.6126581
title: Dataset for the paper "VANETs' research overview updated: past, present and future"

description: These two files contain a form and a dataset, both related to the paper "VANETs’ research overview updated: past, present and future", which was submitted for publication in the <strong>JOURNAL OF BRAZILIAN COMPUTER SOCIETY</strong> ----- by José Anderson Rodrigues de Souza et al., 2023.
DOI: 10.5281/zenodo.6126580
title: Dataset for the paper "VANETs' research overview updated: past, present and future"

description: These two files contain a form and a dataset, both related to the paper "VANETs’ research overview updated: past, present and future", which was submitted for publication in the <strong>JOURNAL OF BRAZILIAN COMPUTER SOCIETY</strong> ----- by José Anderson Rodrigues de Souza et al., 2023.
DOI: 10.48366/r584521
title: Staining Applications on Biofilms

description: 4 different staining methods are compared for biofilms
DOI: 10.34740/kaggle/dsv/5524008
title: Youtube Trending Video - Taiwan & Hong Kong
DOI: 10.6084/m9.figshare.22696414.v1
title: Predictive model TNBC

description: The database presented is part of a case-control study conducted in female patients diagnosed with breast cancer registered in the database of the Regional Institute of Neoplastic Diseases of the North "Dr. Luis Pinillos Ganoza" – IREN Norte, during the period from January 2015 to August 2022.
DOI: 10.25345/c5707wz52
title: MassIVE MSV000091797 - Corn seed germination - transcriptome and proteome in response to lipo-chitooligosaccharide and thuricin17
title: This dataset is about untargeted proteomics of germinated corn seeds at 48h post treatment responses to lipo-chitooligosaccharide and thuricin17.
DOI: 10.6084/m9.figshare.22696414
title: Predictive model - Triple-Negative Breast Cancer

description: The database presented is part of a case-control study conducted in female patients diagnosed with breast cancer registered in the database of the Regional Institute of Neoplastic Diseases of the North "Dr. Luis Pinillos Ganoza" – IREN Norte, during the period from January 2015 to August 2022.
DOI: 10.6084/m9.figshare.22696414.v2
title: Predictive model - Triple-Negative Breast Cancer

description: The database presented is part of a case-control study conducted in female patients diagnosed with breast cancer registered in the database of the Regional Institute of Neoplastic Diseases of the North "Dr. Luis Pinillos Ganoza" – IREN Norte, during the period from January 2015 to August 2022.
DOI: 10.6084/m9.figshare.22696396
title: AP2-132_7-12_FC1-p05_pvaluemut.csv

description: redacted
DOI: 10.6084/m9.figshare.22696396.v1
title: AP2-132_7-12_FC1-p05_pvaluemut.csv

description: redacted
DOI: 10.6084/m9.figshare.22696402.v1
title: AP2-132_HDL_wt-vs-KO_FC1-p05_pvaluemut.csv

description: redacted
DOI: 10.6084/m9.figshare.22696402
title: AP2-132_HDL_wt-vs-KO_FC1-p05_pvaluemut.csv

description: redacted
DOI: 10.6084/m9.figshare.22261666
title: Figure 2

description: this is the figure 2 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22261666.v1
title: Figure 2

description: this is the figure 2 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.21971738
title: Chromosome-level genome assembly of Microplitis manilae Ashmead, 1904 (Hymenoptera: Braconidae)

description: The ﬁnal assembled genome size of Microplitis manilae was 282.85 Mb, with 268.17 Mb assigned to 11 pseudochromosomes. The scaffold N50 length was 25.23 Mb. The genome contained 152.37 Mb of repetitive elements, representing 53.87% of the total genome size. We predicted 15,689 protein-coding genes, of which 13,580 genes were annotated functionally.
DOI: 10.6084/m9.figshare.22262140
title: Figure 3

description: this is the figure 3 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262140.v1
title: Figure 3

description: this is the figure 3 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262143
title: Figure 4

description: this is the figure 4 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262143.v1
title: Figure 4

description: this is the figure 4 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262146
title: Figure 5

description: this is the figure 5 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262146.v1
title: Figure 5

description: this is the figure 5 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262149
title: FIgure 6

description: this is the figure 6 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262149.v1
title: FIgure 6

description: this is the figure 6 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262152
title: Figure 7

description: this is the figure 7 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262152.v1
title: Figure 7

description: this is the figure 7 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262155
title: Sup Fig 1

description: this is the sup figure 1 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262161
title: Sup Fig 2

description: this is the sup figure 2 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262161.v1
title: Sup Fig 2

description: this is the sup figure 2 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262176.v1
title: Sup Fig 3

description: this is the sup figure 3 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262176
title: Sup Fig 3

description: this is the sup figure 3 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262182
title: Sup Fug 4

description: this is the sup figure 4 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.22262182.v1
title: Sup Fug 4

description: this is the sup figure 4 for the manuscript for E2F7-ATX
DOI: 10.6084/m9.figshare.21586731
title: Study of urban thermal environment and local recirculation of the Guangdong-Hong Kong-Macao Greater Bay Area using WRF and local climate zones

description: These are the results of simulations of selected near-surface meteorological variables for different cases during the study period
DOI: 10.48324/dandi.000037/0.230426.0054
title: Allen Institute Openscope - Responses to inconsistent stimuli in somata and distal apical dendrites in primary visual cortex

description: This dataset was collected for the Credit Assignment project, as part of the Allen Institute for Brain Science's OpenScope project. The most up-to-date links to the publications associated with this dataset (a dataset descriptor paper and an analysis paper) can be found by going to the metadata Github repository, linked below.

Briefly, mice were habituated to head-fixation on a running disc over a period of 11 days. Over the last 6 days, mice were presented with repeating stimulus sequences, with consistent features. These sessions are not included in the dataset, as imaging was not performed. Following habituation, sequences with inconsistent features were introduced over three sessions, while two-photon calcium imaging was performed in pyramidal neurons of primary visual cortex (VisP). Specifically, recordings for each mouse were made in one of four planes: L2/3 somata, L5 somata, L2/3 distal apical dendrites or L5 distal apical dendrites. As mice gained experience with the inconsistent sequences, responses to these events were found to evolve in opposite ways in the dendritic and somatic compartments.

The dataset includes 50 sessions total, recorded in 13 subjects, with at least 3 sessions per subject. Each session file includes: **(1)** ROI dF/F traces, **(2)** ROI masks, **(3)** ROI tracking information (where applicable), **(4)** running velocity traces, **(5)** pupil diameter traces, **(6)** pupil centroid position traces in x and y, **(7)** stimulus parameters. Note that gaze was not computed for this dataset. What is provided is the position of the pupil centroid in the pupil recording videos. In addition, a second, slightly larger version of each file was created, also including: **(8)** stimulus frame images (identifiable by `+image` in the file name). Lastly, a third, much larger version of each file was created, also including: **(9)** the motion corrected imaging stack (identifiable by `_obj-raw` in the file name).

Certain sessions in this dataset were excluded from our analyses for quality control reasons. They are provided here, as the reasons we excluded them from our analyses may not pose a problem for all use cases. The metadata Github repository, linked below, provides detailed information about each session.
DOI: 10.25493/5hk3-s8m
title: Neurotransmitter receptor densities per neuron across macaque cortex (v1.0)

description: Neurotransmitter receptors constitute key molecules in signal transduction, and the degree to which they modulate neural activity is dependent on the number of receptors expressed on the neuronal membrane. Receptors for classical neurotransmitters are heterogeneously distributed throughout the macaque monkey cerebral cortex, as are neuronal densities. We applied in vitro receptor autoradiography to quantify the densities of 14 different receptor types in 109 cytoarchitectonically identified areas located throughout the macaque cortex. We used previously published neuron density data ([Collins et al., Proc Natl Acad Sci 107: 15927–15932, 2010](https://doi.org/10.1073/pnas.1010356107)) to estimate the receptor density per neuron in each area. This data can be used to build biologically informed neuronal computational models.
DOI: 10.25442/hku.22345030
title: Supporting data for the thesis titled THE GENESIS OF THE OROGENIC GOLD DEPOSITS IN THE LIAODONG PENINSULA, NORTH CHINA CRATON.zip

description: Thiis is the supporting data for the PhD thesis titled THE GENESIS OF THE OROGENIC GOLD DEPOSITS IN THE LIAODONG PENINSULA, NORTH CHINA CRATON. These data are evidence supporting a metamorphic devolatilization model for the genesis of the orogenic gold deposits in the Liaodong Peninsula, North China Craton. These data include sample descriptions, major and trace elements, Fe-Li-S-O-Sr-Nd isotopes, fluid inclusion microthermometric results from the representative gold deposits, i.e. Baiyun, Wulong, and Xinfang, from the Liaodong Peninsula, North China Craton.
DOI: 10.25442/hku.22345030.v1
title: Supporting data for the thesis titled THE GENESIS OF THE OROGENIC GOLD DEPOSITS IN THE LIAODONG PENINSULA, NORTH CHINA CRATON.zip

description: Thiis is the supporting data for the PhD thesis titled THE GENESIS OF THE OROGENIC GOLD DEPOSITS IN THE LIAODONG PENINSULA, NORTH CHINA CRATON. These data are evidence supporting a metamorphic devolatilization model for the genesis of the orogenic gold deposits in the Liaodong Peninsula, North China Craton. These data include sample descriptions, major and trace elements, Fe-Li-S-O-Sr-Nd isotopes, fluid inclusion microthermometric results from the representative gold deposits, i.e. Baiyun, Wulong, and Xinfang, from the Liaodong Peninsula, North China Craton.
DOI: 10.6084/m9.figshare.22696471
title: Design rules for optimization of photophysical and kinetic properties of azoarene photoswitches

description: The data attached is all of the optimized files for a set of 26 hemi-azothiophenes systems. This contains optimized transition states for the Z/E thermal isomerization, along with the reactive conformers, and IRC calculations from the optimized transition states. All TDDFT data is also given.
DOI: 10.6084/m9.figshare.22696471.v1
title: Design rules for optimization of photophysical and kinetic properties of azoarene photoswitches

description: The data attached is all of the optimized files for a set of 26 hemi-azothiophenes systems. This contains optimized transition states for the Z/E thermal isomerization, along with the reactive conformers, and IRC calculations from the optimized transition states. All TDDFT data is also given.
DOI: 10.25442/hku.22346269
title: Supporting data for Biological importance of TSPYL1 as a transcription regulator

description: To confirmed EMT phenotypes caused by TSPYL1 deficiency, the EMT functional study including scratch assay, tranwell assay and transwell with Matrigel assay were conducted in TSPYL1 knockdown A549 cells. To decipher the mechanism of TSPYL1 regulated EMT, the target genes of TSPYL1 were screened with CUT&RUN-seq. To study the importance of TSPYL1 in vivo, the lung sections H&E stanning from WT and Tspyl1 KO mice were analyzed.
DOI: 10.25442/hku.22346269.v1
title: Supporting data for Biological importance of TSPYL1 as a transcription regulator

description: To confirmed EMT phenotypes caused by TSPYL1 deficiency, the EMT functional study including scratch assay, tranwell assay and transwell with Matrigel assay were conducted in TSPYL1 knockdown A549 cells. To decipher the mechanism of TSPYL1 regulated EMT, the target genes of TSPYL1 were screened with CUT&RUN-seq. To study the importance of TSPYL1 in vivo, the lung sections H&E stanning from WT and Tspyl1 KO mice were analyzed.