cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wft345
title: Occurrence Download

description: A dataset containing 293 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-85.32211 37.09038,-68.71672 37.09038,-68.71672 43.73597,-85.32211 43.73597,-85.32211 37.09038))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Thamnophis brachystoma (Cope, 1892)"
 ]
}

 The dataset includes 293 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000447-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.79tz7x
title: Occurrence Download

description: A dataset containing 5772 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Eurycea wilderae Dunn, 1920)"
 ]
}

 The dataset includes 5772 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000448-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tzk4xx
title: Occurrence Download

description: A dataset containing 2451 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Conradina canescens A.Gray"
 ]
}

 The dataset includes 2451 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000450-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.snb29v
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ambrosia artemisiifolia L.",
 "Country is Moldova, Republic of",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 20 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000451-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zd7a9g
title: Occurrence Download

description: A dataset containing 410 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-58.65538 -35.30196,-53.29989 -35.16529,-52.88677 -31.01887,-58.16517 -29.68422,-58.65538 -35.30196))",
 "TaxonKey is Cerdocyon thous (Linnaeus, 1766)"
 ]
}

 The dataset includes 410 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000453-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14871201
title: Temp - Rent Contracts - 2025-02-14

description: Testing
DOI: 10.5281/zenodo.14871202
title: Temp - Rent Contracts - 2025-02-14

description: Testing
DOI: 10.15468/dl.wwab4q
title: Occurrence Download

description: A dataset containing 2289 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Hyalella azteca (Saussure, 1858)"
 ]
}

 The dataset includes 2289 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000454-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h3c6fy
title: Occurrence Download

description: A dataset containing 6192 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lemmus trimucronatus (Richardson, 1825)"
 ]
}

 The dataset includes 6192 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000455-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6bnbvq
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 {
 "or" : [
 "InstitutionKey is not null",
 "CollectionKey is not null"
 ]
 },
 "BasisOfRecord is one of (Specimen, Fossil, Material sample, Living Specimen, Material citation)"
 ]
 },
 {
 "and" : [
 "BasisOfRecord is one of (Specimen)",
 "TaxonKey is one of (Comparettia macroplectron Rchb.f. & Triana)"
 ]
 }
 ]
}

 The dataset includes 47 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000456-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.7508054
title: GramAdapt Social Contact Dataset

description: The GramAdapt Social Contact Dataset is a curated dataset of 34 language pairs from across the globe, with quantitative and qualitative data on social interaction between pairs of language communities in contact. The language pairs were sampled globally, with the intention of avoiding areal and cultural biases. The data were collected by distributing a questionnaire to experts who have experience with either one or both of the language communities. The responses are subjective expert assessments. Authors 1-3 manually checked each response for judgement of responses. This results in a dataset containing 12554 data points.
DOI: 10.15468/dl.jn7gaa
title: Occurrence Download

description: A dataset containing 453843 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Colinus virginianus (Linnaeus, 1758)"
 ]
}

 The dataset includes 453843 records from 240 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000439-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14872104
title: Simulation scripts for "A Consistent Model to Interpret Optoelectronic Measurements of Semiconductor Photoanodes: Steady-state and Small-perturbation Response"

description: Simulation scripts (MATLAB and SETFOS) for the manuscript "A Consistent Model to Interpret Optoelectronic Measurements of Semiconductor Photoanodes: Steady-state and Small-perturbation Response"
DOI: 10.5281/zenodo.14872105
title: Simulation scripts for "A Consistent Model to Interpret Optoelectronic Measurements of Semiconductor Photoanodes: Steady-state and Small-perturbation Response"

description: Simulation scripts (MATLAB and SETFOS) for the manuscript "A Consistent Model to Interpret Optoelectronic Measurements of Semiconductor Photoanodes: Steady-state and Small-perturbation Response"
DOI: 10.25345/c5251fx8k
title: MassIVE MSV000097118 - Breaking the Atherosclerotic Cycle: Targeting HYOU1 to Rewire MAM Dynamics and Boost Autophagy
title: Atherosclerosis, a major driver of cardiovascular disease (CVD), is characterized by chronic lipid accumulation, oxidative stress, and vascular dysfunction. Oxidized low-density lipoprotein (oxLDL) promotes endothelial damage, macrophage activation, and foam cell formation, accelerating plaque development. Beyond these well-characterized effects, oxLDL perturbs the endoplasmic reticulum (ER)-mitochondria communication, leading to mitochondria-associated ER membrane (MAM) dysfunction, excessive mitochondrial calcium influx, and impaired autophagy. The resulting imbalance contributes to mitochondrial ROS (mROS) accumulation, mitochondrial dysfunction, and lipid overload, reinforcing a self-perpetuating atherosclerotic cycle. Despite growing evidence that MAMs regulate calcium homeostasis, lipid metabolism, and cellular stress adaptation, therapeutic strategies targeting MAM dysfunction remain largely unexplored.
DOI: 10.6084/m9.figshare.28418450
title: IL@APMOF.zip

description: IL@APMOF structures
DOI: 10.6084/m9.figshare.28418450.v1
title: IL@APMOF.zip

description: IL@APMOF structures
DOI: 10.6084/m9.figshare.28418450.v2
title: IL@APMOF.zip

description: IL@APMOF structures
DOI: 10.15468/dl.e73xre
title: Occurrence Download

description: A dataset containing 5772 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Eurycea wilderae Dunn, 1920)"
 ]
}

 The dataset includes 5772 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000457-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fd4ntx
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ambrosia artemisiifolia L.",
 "Country is Montenegro",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 13 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000458-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dm3emr
title: Occurrence Download

description: A dataset containing 191065 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Angola",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 191065 records from 468 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000452-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15472/hebfzq
title: Recurso Hidrobiológico del proyecto: Estudio de Impacto Ambiental 2024 en el Área de Desarrollo Llanos 123

description: El propósito del proyecto es la explotación de yacimientos convencionales de hidrocarburos, actividad que se desea ejecutar, solicitando la modificación de la licencia ambiental exploratoria con el fin de realizar actividades de explotación en el AD Llanos-123.
description: Este recurso contiene los datos biológicos recopilados en el Estudio de Impacto Ambiental (EIA) asociados a la caracterización de las comunidades hidrobiológicas del área de estudio, en sus diferentes parámetros: plancton, perifiton, bentos, macrófitas e ictiofauna. En total, el presente recurso consta de 5.157 registros biológicos (114 eventos de muestreo).
description: Los municipios con representación son Cabuyaro y Barranca de Upía del departamento de Meta, Paratebueno de Cundinamarca y Villanueva del departamento de Casanare. El recurso se distribuye taxonómicamente en los reinos Animalia (2.295), Bacteria (214), Chromista (1.098), Plantae (871) y Protozoa (671), Viridiplantae (8).
DOI: 10.3886/e213461v1
title: ECIN Replication Package for "Assessing the Benefits of Education in Early Childhood: Evidence from a Pre-K Lottery in Georgia"

description: Numerous studies have demonstrated a strong link between participation in pre-K programs and both short-term student achievement and positive later-life outcomes. Existing evidence primarily stems from experimental studies of small-scale, high-quality programs conducted in the 1960s and 1970s and analyses of the federal Head Start program. Meanwhile, evidence on state-funded pre-K programs, with no income restrictions, is scant and inconclusive. Using enrollment lotteries for over-subscribed school-based sites in Georgia’s universal pre-K program, we analyze the impact of participation on elementary school outcomes. We find that lottery-winning school-based Georgia Pre-K enrollees Lottery winners enter kindergarten more prepared in both math and reading than non-winning peers. Gains fade by the end of kindergarten, and some negative achievement effects emerge by grade 4. Free-and-reduced-price meal (FRPM) students benefit more compared to non-FRPM students in later grades, suggesting greater benefits from attendance for disadvantaged students. Although we found no effects on discipline, lottery winners had one fewer absence each grade after kindergarten.<br><br>This is the replication package for the project.
DOI: 10.3886/e213461
title: ECIN Replication Package for "Assessing the Benefits of Education in Early Childhood: Evidence from a Pre-K Lottery in Georgia"

description: Numerous studies have demonstrated a strong link between participation in pre-K programs and both short-term student achievement and positive later-life outcomes. Existing evidence primarily stems from experimental studies of small-scale, high-quality programs conducted in the 1960s and 1970s and analyses of the federal Head Start program. Meanwhile, evidence on state-funded pre-K programs, with no income restrictions, is scant and inconclusive. Using enrollment lotteries for over-subscribed school-based sites in Georgia’s universal pre-K program, we analyze the impact of participation on elementary school outcomes. We find that lottery-winning school-based Georgia Pre-K enrollees Lottery winners enter kindergarten more prepared in both math and reading than non-winning peers. Gains fade by the end of kindergarten, and some negative achievement effects emerge by grade 4. Free-and-reduced-price meal (FRPM) students benefit more compared to non-FRPM students in later grades, suggesting greater benefits from attendance for disadvantaged students. Although we found no effects on discipline, lottery winners had one fewer absence each grade after kindergarten.<br><br>This is the replication package for the project.
DOI: 10.3886/e213461v2
title: ECIN Replication Package for "Assessing the Benefits of Education in Early Childhood: Evidence from a Pre-K Lottery in Georgia"

description: Numerous studies have demonstrated a strong link between participation in pre-K programs and both short-term student achievement and positive later-life outcomes. Existing evidence primarily stems from experimental studies of small-scale, high-quality programs conducted in the 1960s and 1970s and analyses of the federal Head Start program. Meanwhile, evidence on state-funded pre-K programs, with no income restrictions, is scant and inconclusive. Using enrollment lotteries for over-subscribed school-based sites in Georgia’s universal pre-K program, we analyze the impact of participation on elementary school outcomes. We find that lottery-winning school-based Georgia Pre-K enrollees Lottery winners enter kindergarten more prepared in both math and reading than non-winning peers. Gains fade by the end of kindergarten, and some negative achievement effects emerge by grade 4. Free-and-reduced-price meal (FRPM) students benefit more compared to non-FRPM students in later grades, suggesting greater benefits from attendance for disadvantaged students. Although we found no effects on discipline, lottery winners had one fewer absence each grade after kindergarten.<br><br>This is the replication package for the project.
DOI: 10.15468/dl.8bdc5r
title: Occurrence Download

description: A dataset containing 5772 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "TaxonKey is one of (Eurycea wilderae Dunn, 1920)"
 ]
}

 The dataset includes 5772 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000459-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28418546
title: Local government debt expansion and enterprise total factor productivity.zip

description: To enhance understanding of local government debt issues under high-quality development, this paper examines the relationship between local government debt expansion and enterprise total factor productivity (TFP) using data from prefecture-level cities and Shanghai and Shenzhen A-share listed firms from 2003 to 2019. Results reveal a significant inverse U-shaped relationship, driven by positive innovation effects and negative resource misallocation effects. Heterogeneity analysis indicates that this relationship is particularly evident in state-owned enterprises, firms with low financing constraints, firms with low equity concentration, and enterprises located in central and western regions. This study evaluates the optimal debt balance and offers policy recommendations to mitigate fiscal risks.
DOI: 10.6084/m9.figshare.28418546.v1
title: Local government debt expansion and enterprise total factor productivity.zip

description: To enhance understanding of local government debt issues under high-quality development, this paper examines the relationship between local government debt expansion and enterprise total factor productivity (TFP) using data from prefecture-level cities and Shanghai and Shenzhen A-share listed firms from 2003 to 2019. Results reveal a significant inverse U-shaped relationship, driven by positive innovation effects and negative resource misallocation effects. Heterogeneity analysis indicates that this relationship is particularly evident in state-owned enterprises, firms with low financing constraints, firms with low equity concentration, and enterprises located in central and western regions. This study evaluates the optimal debt balance and offers policy recommendations to mitigate fiscal risks.
DOI: 10.18434/m32157
title: Forensic DNA Open Dataset

description: This dataset consists of 11 single-source samples which were genotyped/sequenced with assays targeting Forensic DNA markers. The CE-STR assays reported are: Applied Biosystems GlobalFiler, Applied Biosystems Y-Filer Plus, Promega PowerPlex Fusion 6C, Promega PowerPlex Y23. The CE profiles are also included in a spreadsheet; more information can be found in the Readme_CE text file. Sequencing assays reported include the PowerSeq CRM Nested System (mitochondrial DNA control region sequence, additional information can be found in the Readme_mtDNA text file) and the Verogen ForenSeq DNA Signature Prep Kit (STR, Y-STR, X-STR, SNP sequences). This dataset is intended for educational purposes only. This work was approved by the NIST Research Protections Office. NOTE: Files ending in "sha256" serve as digital signatures for the associated files; however, the actual data is contained in the files without this suffix.
DOI: 10.5066/p1xlmhf4
title: Arthropod detections from eDNA metabarcoding of flower filtrate and DNA derived from bulk samples of insects

description: We compared pollinator diversity derived from environmental DNA (eDNA) extracted from flowers and DNA extracted from pulverized bulk samples of insects collected from vane traps deployed at the same sites. We used three metabarcoding primers, two of which target arthropods generally (COI-Jusino and 16S-Marquina) and one that targets bumblebees (Bombus spp., COI-Milam). Across methods, we detected 77 insect families from 9 orders. The COI-Jusino marker amplified the highest taxonomic diversity compared to 16S-Marquina and COI-Milam. More ASVs were recovered from vane traps (blue: 1357, yellow: 1542) than flowers (245), but only 23% of families and 13% of genera were shared among methods, indicating that flowers and blue and yellow vane traps may each sample different parts of the available arthropod community. Of 29 flowers with known bee visitations, only 10 had bee detections, and incomplete reference databases hindered assignment to species.
DOI: 10.15139/s3/nr109u
title: MSF

description: MSF Data
DOI: 10.15468/dl.486nzm
title: Occurrence Download

description: A dataset containing 464 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ambrosia artemisiifolia L.",
 "Country is Norway",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 464 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000461-250214102907787/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28239587
title: Molecular docking to investigate HLA-associated idiosyncratic drug reactions

description: Idiosyncratic drug reactions (IDRs) pose severe threats to patient health. Unlike conventionally dose-dependent side effects, they are unpredictable and more frequently manifest as life-threatening conditions, such as severe cutaneous adverse reactions (SCARs) and drug-induced liver injury (DILI). Some HLA alleles, such as <i>HLA-B*57:01</i>, <i>HLA-B*15:02</i>, and <i>HLA-B*58:01</i>, are known risk factors for adverse reactions induced by multiple drugs. However, the structural basis underlying most HLA-associated adverse events remains poorly understood. This review summarizes the application of molecular docking to reveal the mechanisms of IDR-related HLA associations, covering studies using this technique to examine drug-HLA binding pockets and identify key binding residues. We provide a comprehensive overview of risk HLA alleles associated with IDRs, followed by a discussion of the utility and limitations of commonly used molecular docking tools in simulating complex molecular interactions within the HLA binding pocket. Through examples, including the binding of abacavir and flucloxacillin to HLA-B*57:01, carbamazepine to HLA-B*15:02, and allopurinol to HLA-B*58:01, we demonstrate how docking analyses can provide insights into the drug and HLA allele-specificity of adverse events. Furthermore, the use of molecular docking to screen drugs with unknown IDR liability is examined, targeting either multiple HLA variants or a single specific variant. Despite multiple challenges, molecular docking presents a promising toolkit for investigating drug-HLA interactions and understanding IDR mechanisms, with significant implications for preemptive HLA typing and safer drug development.
DOI: 10.6084/m9.figshare.28239587.v1
title: Molecular docking to investigate HLA-associated idiosyncratic drug reactions

description: Idiosyncratic drug reactions (IDRs) pose severe threats to patient health. Unlike conventionally dose-dependent side effects, they are unpredictable and more frequently manifest as life-threatening conditions, such as severe cutaneous adverse reactions (SCARs) and drug-induced liver injury (DILI). Some HLA alleles, such as <i>HLA-B*57:01</i>, <i>HLA-B*15:02</i>, and <i>HLA-B*58:01</i>, are known risk factors for adverse reactions induced by multiple drugs. However, the structural basis underlying most HLA-associated adverse events remains poorly understood. This review summarizes the application of molecular docking to reveal the mechanisms of IDR-related HLA associations, covering studies using this technique to examine drug-HLA binding pockets and identify key binding residues. We provide a comprehensive overview of risk HLA alleles associated with IDRs, followed by a discussion of the utility and limitations of commonly used molecular docking tools in simulating complex molecular interactions within the HLA binding pocket. Through examples, including the binding of abacavir and flucloxacillin to HLA-B*57:01, carbamazepine to HLA-B*15:02, and allopurinol to HLA-B*58:01, we demonstrate how docking analyses can provide insights into the drug and HLA allele-specificity of adverse events. Furthermore, the use of molecular docking to screen drugs with unknown IDR liability is examined, targeting either multiple HLA variants or a single specific variant. Despite multiple challenges, molecular docking presents a promising toolkit for investigating drug-HLA interactions and understanding IDR mechanisms, with significant implications for preemptive HLA typing and safer drug development.