cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28089266.v1
title: A wearable repetitive transcranial magnetic stimulation device

description: Dataset S1 contains MEPs acquired during stimulus intensity testing on humans and remote effect demonstration in seated states, using both Magstim and rTMS-tiny.

Dataset S2 contains MEPs acquired during remote effect demonstration in walking states, using rTMS-tiny.

Dataset and code S3 include the mean MEP amplitudes at various stimulating intensities, RMT values, remote effect demonstration data for both seated and walking states, and the pulse counts recorded before the coil surface temperature reaches 40°C. Additionally, the codes for analyzing the data are provided.
DOI: 10.6084/m9.figshare.28553177
title: A mid-infrared Brillouin laser using ultra-high-Q on-chip resonators

description: All data for "A mid-infrared Brillouin laser using ultra-high-Q on-chip resonators"
DOI: 10.6084/m9.figshare.28553177.v1
title: A mid-infrared Brillouin laser using ultra-high-Q on-chip resonators

description: All data for "A mid-infrared Brillouin laser using ultra-high-Q on-chip resonators"
DOI: 10.6084/m9.figshare.28211567
title: DNA Calorimetric Force Spectroscopy at Single Base Pair Resolution

description: The folder contains the raw data obtained from unzipping a 3653bp DNA hairpin at different temperatures with the optical-jump optical tweezers. Files are divided into two main folders, ‘highT’ and ‘lowT’, corresponding to the two setups possible with the force-jump optical tweezers. Inside these folders, data are grouped by acquisition date according to the format DDMMYY. Within each folder, the optical tweezers’ raw output is stored in the 'rawdata' folder. 

The raw data have to be pre-analyzed. Pre-analysis consists of selecting the data useful for our analysis (position, force, status, temperature). The raw data columns to be considered are the following:
 
- Position, x = (A_dist-Y+B_dist-Y)/2
- Force, f = -Y_force
- Status 

The status column stores info about the protocol and the temperature (unzipping: 1000, rezipping: 1001, and laser power: 02, 04, 06, 08, 10, etc.). The laser power corresponds to the second and third digits of the Status. Status values of less than four digits indicate that the unzipping/rezipping protocol was not started and have to be discarded.

The temperature is measured as described in Sec. 1, Methods of the main text. To do this, refer to the file ‘stokes#.txt’ and extract the temperature corresponding to each laser power (stored in the ‘Status’ column as described above) using the Stokes law. To do this, use the ‘MotorVel_X’ column. 

Once these preliminary steps have been completed, one can proceed with the analysis described in the paper to measure the nearest-neighbor base-pairs thermodynamic parameters.
DOI: 10.6084/m9.figshare.28211567.v1
title: DNA Calorimetric Force Spectroscopy at Single Base Pair Resolution

description: The folder contains the raw data obtained from unzipping a 3653bp DNA hairpin at different temperatures with the optical-jump optical tweezers. Files are divided into two main folders, ‘highT’ and ‘lowT’, corresponding to the two setups possible with the force-jump optical tweezers. Inside these folders, data are grouped by acquisition date according to the format DDMMYY. Within each folder, the optical tweezers’ raw output is stored in the 'rawdata' folder. 

The raw data have to be pre-analyzed. Pre-analysis consists of selecting the data useful for our analysis (position, force, status, temperature). The raw data columns to be considered are the following:
 
- Position, x = (A_dist-Y+B_dist-Y)/2
- Force, f = -Y_force
- Status 

The status column stores info about the protocol and the temperature (unzipping: 1000, rezipping: 1001, and laser power: 02, 04, 06, 08, 10, etc.). The laser power corresponds to the second and third digits of the Status. Status values of less than four digits indicate that the unzipping/rezipping protocol was not started and have to be discarded.

The temperature is measured as described in Sec. 1, Methods of the main text. To do this, refer to the file ‘stokes#.txt’ and extract the temperature corresponding to each laser power (stored in the ‘Status’ column as described above) using the Stokes law. To do this, use the ‘MotorVel_X’ column. 

Once these preliminary steps have been completed, one can proceed with the analysis described in the paper to measure the nearest-neighbor base-pairs thermodynamic parameters.
DOI: 10.6084/m9.figshare.28280135
title: Imaging of coexisting classical and non-classical oriented attachment growth pathways in covalent organic framework microcrystals

description: The data that support the findings detailed in this study are available within the article and supplementary information as well as on figshare
DOI: 10.6084/m9.figshare.28280135.v1
title: Imaging of coexisting classical and non-classical oriented attachment growth pathways in covalent organic framework microcrystals

description: The data that support the findings detailed in this study are available within the article and supplementary information as well as on figshare
DOI: 10.6084/m9.figshare.27323229.v1
title: Drivers of avian genomic change revealed by evolutionary rate decomposition

description: Files starting in crx include the ClockstaRX rates decomposition results for each data type (dN, dS, dNdS and intergenic data).

The alltrs.Rdata file contains all gene and species trees included in the study. Trees are also available in newick format.

The chroms_pc_pvals.Rdata file includes the p-values for permutation test across chromosomes.

All files are ready to be read in the open-source R computing environment using the function load.
DOI: 10.5281/zenodo.15020092
title: Syntactic Mistakes in the Written Russian Media Texts [Синтаксические ошибки в письменных текстах в русских СМИ]

description: Every theory in grammar has to explain, where ill-formed sentences with syntactic mistakes come from. Some noted scholars would like to believe that principles UG are easy-to-get, since they are a psycholinguistic reality. My collection of syntactic errors in current Russian mass media texts, all or most of which presumable were generated by native speakers, supports a different viewpoint: syntactic mistakes are often made in a situation, where a speaker is partly conscious about grammatical constraints, but treats them in a wrong way.
DOI: 10.5281/zenodo.15020093
title: Syntactic Mistakes in the Written Russian Media Texts [Синтаксические ошибки в письменных текстах в русских СМИ]

description: Every theory in grammar has to explain, where ill-formed sentences with syntactic mistakes come from. Some noted scholars would like to believe that principles UG are easy-to-get, since they are a psycholinguistic reality. My collection of syntactic errors in current Russian mass media texts, all or most of which presumable were generated by native speakers, supports a different viewpoint: syntactic mistakes are often made in a situation, where a speaker is partly conscious about grammatical constraints, but treats them in a wrong way.
DOI: 10.6084/m9.figshare.24915945
title: ADCP Dataset - Real car collection and Simulation

description: Real car collection is collected by real vehicle, data can be trained or test directly.
Raw data is the data without preprocessing, can be trained or test after preprocessing.
Simulation Urban Roads dataset is simulation data, It can also be used for training, and more simulations can be added by oneself.
DOI: 10.6084/m9.figshare.27275094
title: Plant essential oil targets TRPV3 for skin renewal and structural mechanism of action

description: The cryo-EM maps and atomic coordinates of wild-type human TRPV3 in the apo form and ligand-bound states have been deposited in the Electron Microscopy Data Bank and the Protein Data Bank under the accession numbers: EMD-61396, 9JDM for TRPV3Apo, EMD-61407, 9JE5 for TRPV3Citronellal, EMD-61414, 9JEE for TRPV3Citral, EMD-61415, 9JEF for TRPV3Linalool, and EMD-61416, 9JEG for TRPV3Isodihydrolavandulal.
DOI: 10.6084/m9.figshare.27275094.v1
title: Plant essential oil targets TRPV3 for skin renewal and structural mechanism of action

description: The cryo-EM maps and atomic coordinates of wild-type human TRPV3 in the apo form and ligand-bound states have been deposited in the Electron Microscopy Data Bank and the Protein Data Bank under the accession numbers: EMD-61396, 9JDM for TRPV3Apo, EMD-61407, 9JE5 for TRPV3Citronellal, EMD-61414, 9JEE for TRPV3Citral, EMD-61415, 9JEF for TRPV3Linalool, and EMD-61416, 9JEG for TRPV3Isodihydrolavandulal.
DOI: 10.15468/dl.3phpyb
title: Occurrence Download

description: A dataset containing 81 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chrysalidocarpus lutescens H.Wendl.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 81 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018151-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xujb44
title: Occurrence Download

description: A dataset containing 580 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aquarius elongatus (Uhler, 1896)"
 ]
}

 The dataset includes 580 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018152-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27239511
title: Reusability challenges of livestock production data to improve animal health

description: The Excel spreadsheet is made of 2 sheets. The first sheet presents the data used for the paper. The second sheet presents in details the metadata and in particular the exact link between the data available in the first sheet and the survey conducted in the study.
DOI: 10.6084/m9.figshare.27239511.v1
title: Reusability challenges of livestock production data to improve animal health

description: The Excel spreadsheet is made of 2 sheets. The first sheet presents the data used for the paper. The second sheet presents in details the metadata and in particular the exact link between the data available in the first sheet and the survey conducted in the study.
DOI: 10.15468/dl.53rwsk
title: Occurrence Download

description: A dataset listing the 7 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((114.80894 -8.19394,114.90452 -8.18766,115.00911 -8.18393,115.02793 -8.05246,115.03232 -8.01399,114.82808 -8.01032,114.64707 -8.01338,114.65556 -8.1042,114.6577 -8.14612,114.80894 -8.19394))",
 "IucnRedListCategory is one of (CR, EN, VU)",
 "OccurrenceStatus is Present",
 "Year 2020-2025"
 ]
}

 The dataset's 7 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018146-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.89hhv8
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lipographis subosseella Hulst, 1892",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018153-250310093411724/datasets/export for details.
DOI: 10.6084/m9.figshare.27999161
title: A telomere-to-telomere genome assembly of Chinese grain sorghum 654

description: T2T genome assembly and gene annotation of grain sorghum 654
DOI: 10.6084/m9.figshare.27999161.v1
title: A telomere-to-telomere genome assembly of Chinese grain sorghum 654

description: T2T genome assembly and gene annotation of grain sorghum 654
DOI: 10.6084/m9.figshare.28342463
title: Complexions at the Iron-Magnetite Interface

description: DFT_structures_interfaces:

"Fe_Fe3O4_a0_bccFe.cfg" for Fig. 1b and Fig. 1c
"Fe_FeO01_Fe3O4_a0_bccFe.cfg" for Fig. 1c
"Fe_FeO02_Fe3O4_a0_bccFe.cfg" for Fig. 1b and Fig. 1c
"Fe_FeO03_Fe3O4_a0_bccFe.cfg" for Fig. 1c and Fig. 4a
"Fe_FeO04_Fe3O4_a0_bccFe.cfg" for Fig. 1c and Fig. 2c and Fig. 4b
DOI: 10.6084/m9.figshare.28342463.v1
title: Complexions at the Iron-Magnetite Interface

description: DFT_structures_interfaces:

"Fe_Fe3O4_a0_bccFe.cfg" for Fig. 1b and Fig. 1c
"Fe_FeO01_Fe3O4_a0_bccFe.cfg" for Fig. 1c
"Fe_FeO02_Fe3O4_a0_bccFe.cfg" for Fig. 1b and Fig. 1c
"Fe_FeO03_Fe3O4_a0_bccFe.cfg" for Fig. 1c and Fig. 4a
"Fe_FeO04_Fe3O4_a0_bccFe.cfg" for Fig. 1c and Fig. 2c and Fig. 4b
DOI: 10.15468/dl.x7v3ec
title: Occurrence Download

description: A dataset containing 425 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Phoenix roebelenii O'Brien",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 425 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018154-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n93m6g
title: Occurrence Download

description: A dataset containing 10805 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Machilus thunbergii Siebold & Zucc."
 ]
}

 The dataset includes 10805 records from 167 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018155-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7sa2n2
title: Occurrence Download

description: A dataset containing 300 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cyrtostachys renda Blume",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 300 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018156-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d5h7uk
title: Occurrence Download

description: A dataset containing 5443 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Archontophoenix cunninghamiana (H.Wendl.) H.Wendl. & Drude",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 5443 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018157-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.at6qm5
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Apanteles sodalis (Haliday, 1834)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 23 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018158-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2m8m7g
title: Occurrence Download

description: A dataset containing 9231 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pinus patula Schiede ex Schltdl. & Cham.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 9231 records from 153 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018159-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xxn4nh
title: Occurrence Download

description: A dataset containing 27992 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pyracantha coccinea M.Roem.",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 27992 records from 511 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018160-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1124314.10fu
title: SH1124314.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1124318.10fu
title: SH1124318.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1124321.10fu
title: SH1124321.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1124324.10fu
title: SH1124324.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1124328.10fu
title: SH1124328.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.