cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive22356.20251217.10
title: Taxeobacter sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0089647.10fu
title: SH0089647.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive22357.20230509.8.1
title: Archangium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive22357.20251217.10
title: Archangium sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0089648.10fu
title: SH0089648.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive22358.20230509.8.1
title: Myxococcus virescens

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0089649.10fu
title: SH0089649.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.18115416
title: Metagenomic Discovery and Characterization of OVRE1: A Chimeric Viral-Retroviral Pathogen in Human Gut and Vaginal Niches Associated with Unexplained Chronic Neuro-Gut Inflammation

description: Discovery of OVRE1

This study describes a female patient with chronic unexplained inflammation affecting both the gut and the vaginal mucosa, in whom routine microbiological and serological testing failed to identify a clear etiological agent. Metagenomic sequencing of gut and vaginal samples was performed on stringently host-depleted DNA and RNA, followed by PFAM domain annotation of the microbial metagenome. A rich landscape of retroviral, viral, and mobile genetic element–associated domains was detected at both sites, including MLV-like and BIV-like motifs (MLVIN_C, BIV_Env), reverse transcriptase RVT_1, integrase cores (rve, phage integrase families), retroviral capsid proteins (Gag_p24/p30), zinc-finger modules (zf‑C2H2/UBZ), and recurrent uncharacterized domains (DUF16, DUF2203).

Quantitative analysis showed that these domains are enriched relative to the total predicted proteome in both gut and vaginal metagenomes, with higher overall enrichment of integrase, zinc-finger, and DUF families in the gut, and a more compact retroviral-like cassette in the vaginal niche. Gene-neighborhood analysis and a scaffold-level PFAM aggregation file (M_GUT_DNA_20M_targeted_scaffold_summary.tsv) revealed contigs in the vaginal dataset—most prominently scaffold k119_12088—where Gag, RT, integrase, and Env-like domains co-occur with herpes-like, pox-like, viroporin, toxin, and CobW-like metabolic genes in a single multi-kilobase unit, consistent with a near-complete MLV/BIV-like retroviral chassis expanded by additional virulence and metabolic modules, here provisionally designated OVRE1. Importantly, the same OVRE1-defining chimeric junctions and PFAM-domain combinations were also detected in the spouse’s gut metagenome, reconstructed with comparable coverage and junction-spanning read support, indicating that OVRE1 represents a shared, horizontally transmissible element rather than an idiosyncratic assembly confined to a single host.

These findings support the presence of a shared MLV/BIV-based retro/mobile genetic “background” across the gut–vaginal axis at the household level that may contribute to chronic mucosal inflammation and motivate the development of PFAM-based diagnostic panels for patients with unexplained inflammatory syndromes.
DOI: 10.13145/bacdive22358.20251217.10
title: Myxococcus virescens

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive22359.20230509.8.1
title: Myxococcus virescens

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0089650.10fu
title: SH0089650.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.18008431
title: Metagenomic Discovery and Characterization of OVRE1: A Chimeric Viral-Retroviral Pathogen in Human Gut and Vaginal Niches Associated with Unexplained Chronic Neuro-Gut Inflammation

description: Discovery of OVRE1

This study describes a female patient with chronic unexplained inflammation affecting both the gut and the vaginal mucosa, in whom routine microbiological and serological testing failed to identify a clear etiological agent. Metagenomic sequencing of gut and vaginal samples was performed on stringently host-depleted DNA and RNA, followed by PFAM domain annotation of the microbial metagenome. A rich landscape of retroviral, viral, and mobile genetic element–associated domains was detected at both sites, including MLV-like and BIV-like motifs (MLVIN_C, BIV_Env), reverse transcriptase RVT_1, integrase cores (rve, phage integrase families), retroviral capsid proteins (Gag_p24/p30), zinc-finger modules (zf‑C2H2/UBZ), and recurrent uncharacterized domains (DUF16, DUF2203).

Quantitative analysis showed that these domains are enriched relative to the total predicted proteome in both gut and vaginal metagenomes, with higher overall enrichment of integrase, zinc-finger, and DUF families in the gut, and a more compact retroviral-like cassette in the vaginal niche. Gene-neighborhood analysis and a scaffold-level PFAM aggregation file (M_GUT_DNA_20M_targeted_scaffold_summary.tsv) revealed contigs in the vaginal dataset—most prominently scaffold k119_12088—where Gag, RT, integrase, and Env-like domains co-occur with herpes-like, pox-like, viroporin, toxin, and CobW-like metabolic genes in a single multi-kilobase unit, consistent with a near-complete MLV/BIV-like retroviral chassis expanded by additional virulence and metabolic modules, here provisionally designated OVRE1. Importantly, the same OVRE1-defining chimeric junctions and PFAM-domain combinations were also detected in the spouse’s gut metagenome, reconstructed with comparable coverage and junction-spanning read support, indicating that OVRE1 represents a shared, horizontally transmissible element rather than an idiosyncratic assembly confined to a single host.

These findings support the presence of a shared MLV/BIV-based retro/mobile genetic “background” across the gut–vaginal axis at the household level that may contribute to chronic mucosal inflammation and motivate the development of PFAM-based diagnostic panels for patients with unexplained inflammatory syndromes.
DOI: 10.13145/bacdive22359.20251217.10
title: Myxococcus virescens

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive22360.20230509.8.1
title: Myxococcus virescens

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive22360.20251217.10
title: Myxococcus virescens

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive22361.20230509.8.1
title: Myxococcus virescens

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0089651.10fu
title: SH0089651.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.ptc7ut
title: Occurrence Download

description: A dataset containing 11733283 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Parus)",
 "Continent is one of (Europe)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 11733283 records from 6196 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077110-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ybneec
title: Occurrence Download

description: A dataset containing 182 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Maihueniopsis ovata (Pfeiff.) F.Ritter"
 ]
}

 The dataset includes 182 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021068-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.2909/b4ca42b1-35f5-4682-9792-b6b113edf95c
title: Small Woody Features 2021 (vector), Europe, 3-yearly, Oct. 2025

description: Small Woody Features are important vectors of biodiversity and provide information on fragmentation of habitats with a direct potential for restoration while also providing a link to hazard protection and green infrastructure, amongst others. VHR_IMAGE_2021 made available in the ESA Copernicus DWH was the main data source for the detection of small woody features identifiable within the given image resolution. The Small Woody Features layer contains woody linear and patchy elements but will not be further differentiated into trees, hedges, bushes and scrub. The spatial pattern shall be limited to linear structures and isolated patches on the basis of geometric characteristics. 

This product is a vector dataset distributed as OGC GeoPackage files, compliant with the EEA reference grid (100km x 100km).
DOI: 10.15468/dl.npd9zb
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.28_1",
 "TaxonKey is Juncus compressus"
 ]
}

 The dataset includes 42 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002157-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17426360
title: PLANET4B Policy analysis Bio/-diverse Edible City Graz 20252310 v1

description: The data include background work on the policy analysis underlying the PLANET4B Dossier "Bio-/Diverse Edible City Graz - Ideas for Inclusive Policy Measures to Promote (Agro-)Biodiversity and Reduce Social Inequality".
DOI: 10.5281/zenodo.17425971
title: PLANET4B_WorkshopData_UK_Brussels_120625_110925_v1_Data_xlsx

description: This data was collected as part of Task 4.3 in the PLANET4B project. The data contained in the spreadsheet are a compliation of oral data from workshop participants, recorded in the form of workshop notes. The data was collected across six workshops. The spreadsheet contains a separate sheet for the data recorded in each of the six workshops. The purpose of the six workshops was to discuss and validate transformative pathways and transformative methods from the PLANET4B project. The workshop participants included actors working in policy, business, research and members of civil society. No personal data are included. The workshop notes have been processed to ensure anonymity in alignment with the projects requirements on research ethics.
DOI: 10.5281/zenodo.17425970
title: PLANET4B_WorkshopData_UK_Brussels_120625_110925_v1_Data_xlsx

description: This data was collected as part of Task 4.3 in the PLANET4B project. The data contained in the spreadsheet are a compliation of oral data from workshop participants, recorded in the form of workshop notes. The data was collected across six workshops. The spreadsheet contains a separate sheet for the data recorded in each of the six workshops. The purpose of the six workshops was to discuss and validate transformative pathways and transformative methods from the PLANET4B project. The workshop participants included actors working in policy, business, research and members of civil society. No personal data are included. The workshop notes have been processed to ensure anonymity in alignment with the projects requirements on research ethics.
DOI: 10.5281/zenodo.17416003
title: PLANET4B_interviews_FocusGroups_UK_PolicyExperts_BusinessActors_221025_v1_docx

description: This data was collected as part of Task 4.1 in the PLANET4B project, which involved three online interviews with policy experts and two focus group discussion with business actors. The purpose of the data collection was to understand how research on values, behaviour, intersectionality and social inclusion can enable transformative change for biodiversity in policy and business contexts. The file contains a document containing of interview notes that were transcribed from three interviews with policy experts and a document containing notes that were recorded during focus groups. No personal data is included. The data has been processed to ensure anonymity, in accordance with research ethics requirements of the project.
DOI: 10.5281/zenodo.17416005
title: PLANET4B_interviews_FocusGroups_UK_PolicyExperts_BusinessActors_221025_v1_docx

description: This data was collected as part of Task 4.1 in the PLANET4B project, which involved three online interviews with policy experts and two focus group discussion with business actors. The purpose of the data collection was to understand how research on values, behaviour, intersectionality and social inclusion can enable transformative change for biodiversity in policy and business contexts. The file contains a document containing of interview notes that were transcribed from three interviews with policy experts and a document containing notes that were recorded during focus groups. No personal data is included. The data has been processed to ensure anonymity, in accordance with research ethics requirements of the project.
DOI: 10.15468/gb3cu5
title: Luronium natans habitats in Flanders, Belgium

description: Luronium natans habitats in Flanders, Belgium is a sampling event dataset published by the Research Institute for Nature and Forest (INBO). This dataset contains all non-invasive aquatic plants collected during a Luronium natans survey. Here it is published as a standardized Darwin Core Archive and includes for each sampling event an eventID, date, location and sampling protocol (in the event core) and for each occurrence an occurrenceID, the abundance of recorded individuals, status (present/absent) and scientific name (in the occurrence extension). Issues with the dataset can be reported at https://github.com/inbo/data-publication/issues.

All the recorded invasive plants in these habitats are published in this sister dataset: https://doi.org/10.15468/tar6w7.

We have released this dataset under a Creative Commons Attribution data licence. We would appreciate it if you follow the GBIF citation guidelines (https://www.gbif.org/citation-guidelines
) when using the data. If you have any questions regarding this dataset, don't hesitate to contact us via the contact information provided in the metadata.
DOI: 10.25934/pr00005822.0
title: Available IPD datapackage for study 'Population Based Surveillance to Estimate the Burden of Herpes Zoster and Post-herpetic Neuralgia in Italy'

description: The purpose of this study is to collect data on the incidence, complications, economic burden and impact on the quality of life in adults aged ≥ 50 years with HZ disease in Italy.
DOI: 10.7910/dvn/47sxkj
title: Replication Data for: Contentious rituals and inter-group relations: Parading in Northern Ireland

description: Replication files for journal article accepted at British Journal of Political Science titled 'Contentious rituals and inter-group relations: Parading in Northern Ireland' by Kit Rickard, 

. For any questions regarding the replication, please contact Kit at kit.rickard@sipo.gess.ethz.ch.
DOI: 10.25345/c5qz22w79
title: MassIVE MSV000099613 - XIAMENUNIVERSITY-QIUYAN-Eucalyptal A (ykz1316)
title: Eucalyptal A, an organic heterotetracyclic compound from Eucalyptus globulus ( 468.29 g/mol), possesses antineoplastic activity, serving as a metabolite and potential antineoplastic agent with diverse structural affiliations.
DOI: 10.5281/zenodo.17453162
title: Diseases of veins
DOI: 10.5281/zenodo.17453163
title: Diseases of veins
DOI: 10.5281/zenodo.14975003
title: Arctic Sea Ice and Land Parameter Correlations (ASILaC)

description: The ASILaC datasets presents monthly files of correlation statistics calculated between Sea Ice Area (SIA) in eight Arctic basins and terrestrial parameters in the Arctic region North of 60°N.

Data format: raster GeoTIFF

The terrestrial parameters are: 1. Permafrost Ground Temperature at 2m depth 2000-2019 (source: Obu et al. (2023))2. Maximum NDVI (MaxNDVI) based on MODIS 2000-2019 (Source: Tommervik (2025))3. Time Integrated NDVI (TINDVI) based on MODIS 2000-2019 (Source: Tommervik (2025))4. Snow Water Equivalent (SWE) 2000-2018 based on SSMI (Source: Luojus et al. (2021))

Sea ice area data for 2000-2019 have been obtained from OSI SAF (OSI SAF 2020).

De-trending has been applied to all parameters. The correlation (r) has been filtered at significance level p_value < 0.05. 

Each file referring to subbasins contains 6 bands: 

Band 1: minimum correlation valueBand 2: maximum correlation valueBand 3: associated basin with minimum correlation value Band 4: associated basin with maximum correlation value Band 5: mean correlation valueBand 6: standard deviation

Each file referring to the entire NH sea ice area contains 1 band: Band 1: correlation value

Bartsch, A., Tanguy, R., Bergstedt, H., von Baeckmann, C., Tømmervik, H., Macias-Fauria, M., Lemmetyinen, J., Rautiainen, K., Gruber, C., and Forbes, B. C.: Similarities between sea ice area variations and satellite-derived terrestrial biosphere and cryosphere parameters across the Arctic, The Cryosphere, 19, 4929–4967, https://doi.org/10.5194/tc-19-4929-2025, 2025.