cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5965912.v1
title: An evidence-based review of pregabalin for the treatment of fibromyalgia

description: <b>Objectives:</b> Pregabalin, an α2-δ agonist, is approved for the treatment of fibromyalgia (FM) in the United States, Japan, and 37 other countries. The purpose of this article was to provide an in-depth, evidence-based summary of pregabalin for FM as demonstrated in randomized, placebo-controlled clinical studies, including open-label extensions, meta-analyses, combination studies and post-hoc analyses of clinical study data. <b>Methods:</b> PubMed was searched using the term “pregabalin AND fibromyalgia” and the Cochrane Library with the term “pregabalin”. Both searches were conducted on 2 March 2017 with no other date limits set. <b>Results:</b> Eleven randomized, double-blind, placebo-controlled clinical studies were identified including parallel group, two-way crossover and randomized withdrawal designs. One was a neuroimaging study. Five open-label extensions were also identified. Evidence of efficacy was demonstrated across the studies identified with significant and clinically relevant improvements in pain, sleep quality and patient status. The safety and tolerability profile of pregabalin is consistent across all the studies identified, including in adolescents, with dizziness and somnolence the most common adverse events reported. These efficacy and safety data are supported by meta-analyses (13 studies). Pregabalin in combination with other pharmacotherapies (7 studies) is also efficacious. Post-hoc analyses have demonstrated the onset of pregabalin efficacy as early as 1–2 days after starting treatment, examined the effect of pregabalin on other aspects of sleep beyond quality, and shown it is effective irrespective of the presence of a wide variety of patient demographic and clinical characteristics. <b>Conclusions:</b> Pregabalin is a treatment option for FM; its clinical utility has been comprehensively demonstrated.
DOI: 10.6084/m9.figshare.5965900
title: Raw simulated data

description: This is simulated data based on a simple probabilistic step function to model cancellation responses. The data contain 10,000 iterations of the same process, split up into 40 smaller datafiles of 250 iterations each. <br>
DOI: 10.6084/m9.figshare.5965900.v1
title: Raw simulated data

description: This is simulated data based on a simple probabilistic step function to model cancellation responses. The data contain 10,000 iterations of the same process, split up into 40 smaller datafiles of 250 iterations each. <br>
DOI: 10.6084/m9.figshare.5965855
title: Deliverable 2.2 Shortlist of ecotechnologies. Bonus Return Work Package 2

description: Deliverable 2.2 from the Bonus Return project, listing ecotechnologies found from an assessment of the evidence relating to reuse of carbon and nutrients in the Baltic from agricultural and municipal wastewater sectors.
DOI: 10.6084/m9.figshare.5965852
title: Raw data for fig 1B, S1B and S1C

description: <b>Contents:</b> Combineddata06012014.mat accompanies Fig.1B, S1B and S1C of Sampattavanich et al., Cell Systems (2018). The file contains two variables: <i>reporter</i> and <i>parental</i>, each contains data from 5 timepoints: Each variables contain timepoint struct variables, each with 8x12: Time0: {8×12 cell};Time15: {8×12 cell};Time45: {8×12 cell};Time90: {8×12 cell};Time120: {8×12 cell}.<br>Each cell then contains the following data fields:<br> 'nuc_area' 'nuc_coordX' 'nuc_coordY' 'nuc_formfactor' 'nuc_integratedDAPI' 'nuc_integratedFoxO3' 'nuc_integratedWCDGreen' 'nuc_meanDAPI' 'nuc_meanFoxO3' 'nuc_meanWCDGreen' 'nuc_normmeanFoxO3' 'log10CoverN_extended_norm' 'log10CoverN_extended' 'log10CoverN_4pixel_norm' 'log10CoverN_4pixel' 'extendedcyto_area' 'extendedcyto_integratedDAPI' 'extendedcyto_integratedFoxO3' 'extendedcyto_integratedECDGreen' 'extendedcyto_meanDAPI' 'extendedcyto_meanFoxO3' 'extendedcyto_meanWCDGreen' 'smallcyto_area' 'smallcyto_integratedDAPI' 'smallcyto_integratedFoxO3' 'smallcyto_integratedWCDGreen' 'smallcyto_meanDAPI' 'smallcyto_meanFoxO3' 'smallcyto_meanWCDGreen'<br><b>To use this data with our Git Repository:</b>Placed these in the /rawdata/parentalVSReporter folder.<br> <b>Experimental Setup:</b><br> Treatment Condition: Cells were serum starved for 6 hours, then treated with combination of drugs and ligands for 0, 15, 45, 90, 135 minutes. Parental 184A1 cells were immunostained with FoxO3 antibody. Engineered 184A1 cells with F3aN400 sensor were fixed and directly imaged.<br>
DOI: 10.6084/m9.figshare.5965819
title: Additional file 3: of Cancer cell metabolic plasticity allows resistance to NAMPT inhibition but invariably induces dependence on LDHA

description: Table S1. List of gene expression from genome wide analysis in CCRF-CEM cells. (XLSX 44303Â kb)
DOI: 10.6084/m9.figshare.5965819.v1
title: Additional file 3: of Cancer cell metabolic plasticity allows resistance to NAMPT inhibition but invariably induces dependence on LDHA

description: Table S1. List of gene expression from genome wide analysis in CCRF-CEM cells. (XLSX 44303Â kb)
DOI: 10.6084/m9.figshare.5965813
title: Additional file 1: of Cancer cell metabolic plasticity allows resistance to NAMPT inhibition but invariably induces dependence on LDHA

description: Table S2. List of RT-PCR primer sequences. (XLS 34Â kb)
DOI: 10.6084/m9.figshare.5965813.v1
title: Additional file 1: of Cancer cell metabolic plasticity allows resistance to NAMPT inhibition but invariably induces dependence on LDHA

description: Table S2. List of RT-PCR primer sequences. (XLS 34Â kb)
DOI: 10.6084/m9.figshare.5965810
title: Additional file 9 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Pathways-enrichment of common gene signature. Pathways enrichment analysis for 8 genes in common with other participants of the SysTox Computational Challenge. (CSV 2 kb)
DOI: 10.6084/m9.figshare.5965810.v1
title: Additional file 9 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Pathways-enrichment of common gene signature. Pathways enrichment analysis for 8 genes in common with other participants of the SysTox Computational Challenge. (CSV 2 kb)
DOI: 10.6084/m9.figshare.5965807
title: Additional file 8 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: GO-enrichment of specific gene signature. Gene ontology enrichment analysis for 6 genes not in common with other participants of the SysTox Computational Challenge. (CSV 9 kb)
DOI: 10.6084/m9.figshare.5965807.v1
title: Additional file 8 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: GO-enrichment of specific gene signature. Gene ontology enrichment analysis for 6 genes not in common with other participants of the SysTox Computational Challenge. (CSV 9 kb)
DOI: 10.6084/m9.figshare.5965804
title: Additional file 7 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: GO-enrichment of common gene signature. Gene ontology enrichment analysis for 8 genes in common with other participants of the SysTox Computational Challenge. (CSV 11 kb)
DOI: 10.6084/m9.figshare.5965804.v1
title: Additional file 7 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: GO-enrichment of common gene signature. Gene ontology enrichment analysis for 8 genes in common with other participants of the SysTox Computational Challenge. (CSV 11 kb)
DOI: 10.6084/m9.figshare.5965801
title: Additional file 6 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Gene-disease-chemical of RFE-SVM signature in FSvsNS. Gene-disease-chemical association studies for gene signature predicted by RFE-SVM method for former smokers versus never smokers case study. (CSV 32 kb)
DOI: 10.6084/m9.figshare.5965801.v1
title: Additional file 6 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Gene-disease-chemical of RFE-SVM signature in FSvsNS. Gene-disease-chemical association studies for gene signature predicted by RFE-SVM method for former smokers versus never smokers case study. (CSV 32 kb)
DOI: 10.6084/m9.figshare.5965798
title: Additional file 6 of An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways

description: Enrichment terms for gene cross-talks. All regulatory interactions and enriched pathways for genes involved in cross-talk between intracellular protein transport and signaling pathway. (ZIP 100 kb)
DOI: 10.6084/m9.figshare.5965798.v1
title: Additional file 6 of An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways

description: Enrichment terms for gene cross-talks. All regulatory interactions and enriched pathways for genes involved in cross-talk between intracellular protein transport and signaling pathway. (ZIP 100 kb)
DOI: 10.6084/m9.figshare.5965795
title: Additional file 5 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Gene-disease-chemical of LASSO-LARS signature in FSvsNS. Gene-disease-chemical association studies for gene signature predicted by LASSO-LARS method for former smokers versus never smokers case study. (CSV 15 kb)
DOI: 10.6084/m9.figshare.5965795.v1
title: Additional file 5 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Gene-disease-chemical of LASSO-LARS signature in FSvsNS. Gene-disease-chemical association studies for gene signature predicted by LASSO-LARS method for former smokers versus never smokers case study. (CSV 15 kb)
DOI: 10.6084/m9.figshare.5965792
title: Additional file 5 of An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways

description: Network functional modules enrichment. Module wise functional and pathways enrichment analysis of the network. (ZIP 131 kb)
DOI: 10.6084/m9.figshare.5965792.v1
title: Additional file 5 of An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways

description: Network functional modules enrichment. Module wise functional and pathways enrichment analysis of the network. (ZIP 131 kb)
DOI: 10.6084/m9.figshare.5965789
title: Additional file 4 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Gene-disease-chemical of Extra-Trees signature in FSvsNS. Gene-disease-chemical association studies for gene signature predicted by Extra-Trees method for former smokers versus never smokers case study. (CSV 44 kb)
DOI: 10.6084/m9.figshare.5965789.v1
title: Additional file 4 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Gene-disease-chemical of Extra-Trees signature in FSvsNS. Gene-disease-chemical association studies for gene signature predicted by Extra-Trees method for former smokers versus never smokers case study. (CSV 44 kb)
DOI: 10.6084/m9.figshare.5965783
title: Additional file 4 of An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways

description: Network enrichment. Gene Ontology and Pathways enrichment analysis results for the complete regulatory interaction network from 591 gene perturbation expression data. (ZIP 41 kb)
DOI: 10.6084/m9.figshare.5965783.v1
title: Additional file 4 of An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways

description: Network enrichment. Gene Ontology and Pathways enrichment analysis results for the complete regulatory interaction network from 591 gene perturbation expression data. (ZIP 41 kb)
DOI: 10.6084/m9.figshare.5965777
title: MOESM3 of OPERA models for predicting physicochemical properties and environmental fate endpoints

description: Additional file 3: S3. An example Excel table downloaded from the Chemistry Dashboard with predicted OPERA values.
DOI: 10.6084/m9.figshare.5965774
title: Additional file 3 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Gene-disease-chemical study of RFE-SVM signature in SvsNCS. Gene-disease-chemical association studies for gene signature predicted by RFE-SVM method for smokers versus non-current smokers case study. (CSV 50 kb)
DOI: 10.6084/m9.figshare.5965774.v1
title: Additional file 3 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Gene-disease-chemical study of RFE-SVM signature in SvsNCS. Gene-disease-chemical association studies for gene signature predicted by RFE-SVM method for smokers versus non-current smokers case study. (CSV 50 kb)
DOI: 10.6084/m9.figshare.5965771
title: Additional file 3 of An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways

description: Node statistics table. Topological parameters of each nodes in the network. (ZIP 50 kb)
DOI: 10.6084/m9.figshare.5965771.v1
title: Additional file 3 of An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways

description: Node statistics table. Topological parameters of each nodes in the network. (ZIP 50 kb)
DOI: 10.6084/m9.figshare.5965762
title: Additional file 2 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Gene-disease-chemical study of LASSO-LARS signature in SvsNCS. Gene-disease-chemical association studies for gene signature predicted by LASSO-LARS method for smokers versus non-current smokers case study. (CSV 30 kb)
DOI: 10.6084/m9.figshare.5965762.v1
title: Additional file 2 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Gene-disease-chemical study of LASSO-LARS signature in SvsNCS. Gene-disease-chemical association studies for gene signature predicted by LASSO-LARS method for smokers versus non-current smokers case study. (CSV 30 kb)
DOI: 10.6084/m9.figshare.5965759
title: MOESM2 of OPERA models for predicting physicochemical properties and environmental fate endpoints

description: Additional file 2: S2. OPERA command line help file.
DOI: 10.6084/m9.figshare.5965759.v1
title: MOESM2 of OPERA models for predicting physicochemical properties and environmental fate endpoints

description: Additional file 2: S2. OPERA command line help file.
DOI: 10.6084/m9.figshare.5965753
title: Additional file 2 of An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways

description: DAVID Enrichment analysis 591 genes. Gene ontology and pathway enrichment analysis of the complete list of perturbed genes. (ZIP 203 kb)
DOI: 10.6084/m9.figshare.5965753.v1
title: Additional file 2 of An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways

description: DAVID Enrichment analysis 591 genes. Gene ontology and pathway enrichment analysis of the complete list of perturbed genes. (ZIP 203 kb)
DOI: 10.6084/m9.figshare.5965744
title: Additional file 1 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Gene-disease-chemical study of Extra-Trees signature in SvsNCS. Gene-disease-chemical association studies for gene signature predicted by Extra-Trees method for smokers versus non-current smokers case study. (CSV 59 kb)
DOI: 10.6084/m9.figshare.5965744.v1
title: Additional file 1 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Gene-disease-chemical study of Extra-Trees signature in SvsNCS. Gene-disease-chemical association studies for gene signature predicted by Extra-Trees method for smokers versus non-current smokers case study. (CSV 59 kb)
DOI: 10.6084/m9.figshare.5965738
title: MOESM1 of OPERA models for predicting physicochemical properties and environmental fate endpoints

description: Additional file 1: S1. Training and test sets of the models with the corresponding JRC validated QMRFs.
DOI: 10.6084/m9.figshare.5965738.v1
title: MOESM1 of OPERA models for predicting physicochemical properties and environmental fate endpoints

description: Additional file 1: S1. Training and test sets of the models with the corresponding JRC validated QMRFs.
DOI: 10.6084/m9.figshare.5965729
title: Additional file 1 of An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways

description: Perturbed gene list. Complete list of perturbed genes. (ZIP 11 kb)
DOI: 10.6084/m9.figshare.5965729.v1
title: Additional file 1 of An integrated approach to infer cross-talks between intracellular protein transport and signaling pathways

description: Perturbed gene list. Complete list of perturbed genes. (ZIP 11 kb)
DOI: 10.6084/m9.figshare.5965714
title: Additional file 11 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Pathways mapping of common versus specific gene signature. Mapping pathways enrichment for both common and specific gene signature with respect to the complete pathways set associated with tobacco smoke pollution. (CSV 93 kb)
DOI: 10.6084/m9.figshare.5965714.v1
title: Additional file 11 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Pathways mapping of common versus specific gene signature. Mapping pathways enrichment for both common and specific gene signature with respect to the complete pathways set associated with tobacco smoke pollution. (CSV 93 kb)
DOI: 10.6084/m9.figshare.5965702
title: Additional file 10 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Pathways-enrichment of specific gene signature. Pathways enrichment analysis for 6 genes not in common with other participants of the sbv IMPROVER SysTox Computational Challenge. (CSV 2 kb)
DOI: 10.6084/m9.figshare.5965702.v1
title: Additional file 10 of Ensemble of rankers for efficient gene signature extraction in smoke exposure classification

description: Pathways-enrichment of specific gene signature. Pathways enrichment analysis for 6 genes not in common with other participants of the sbv IMPROVER SysTox Computational Challenge. (CSV 2 kb)
DOI: 10.17608/k6.auckland.5965522
title: yellow_tripdata_2016-07trim.csv

description: Data from the NYC Taxi and Limousine Commission on taxi trips in July to December 2016. Collected here for a manuscript on fitting generalised linear models to large data sets. <br>The files have had their header line removed, because it's not consistent with the data format (there are blank fields at the end). <br>Obtained from https://github.com/toddwschneider/nyc-taxi-data who got it from http://www.nyc.gov/html/tlc/html/about/trip_record_data.shtml
DOI: 10.17608/k6.auckland.5965522.v1
title: yellow_tripdata_2016-07trim.csv

description: Data from the NYC Taxi and Limousine Commission on taxi trips in July to December 2016. Collected here for a manuscript on fitting generalised linear models to large data sets. <br>The files have had their header line removed, because it's not consistent with the data format (there are blank fields at the end). <br>Obtained from https://github.com/toddwschneider/nyc-taxi-data who got it from http://www.nyc.gov/html/tlc/html/about/trip_record_data.shtml
DOI: 10.6084/m9.figshare.5965492
title: Materials and raw data

description: These downloadable files accompany the Research Article:<br>Beyersmann, E., et al. 2018. Plural dominance and the production of determiner-noun phrases in French. PLOS ONE.<br>
DOI: 10.6084/m9.figshare.5965486.v1
title: Figure

description: Simulation Data such as Brownian Motion and Ant Colony, Experiment Data of Hela and mouse nerual cell. Lysosomes was tracked with 10Hz frequency in 5min. PECAN method was used to characterize the collective behavior of the simulated or experimental data.
DOI: 10.6084/m9.figshare.5965486.v2
title: Figures of PECAN

description: Simulation data such as Brownian motion and Ant Colony, Experiment Data of Hela and mouse nerual cell were proposed. Lysosomes in live cell were tracked with 10Hz frequency in 5min. PECAN method was used to characterize the collective behavior of the simulated or experimental data.
DOI: 10.6084/m9.figshare.5965474
title: Data Set for "If Research Libraries and Funders Finance Open Access"

description: Revised data on funders and revenue for articles published by eLife and PLOS, and aggregated by BioOne for 2015, as part of a model for open access publishing in which funders and libraries (for unsponsored research) pay publishers directly. Data is used in article "If Research Libraries an Funders Finance Open Access.
DOI: 10.6084/m9.figshare.5965474.v2
title: Data Set for "If Research Libraries and Funders Finance Open Access"

description: Revised data on funders and revenue for articles published by eLife and PLOS, and aggregated by BioOne for 2015, as part of a model for open access publishing in which funders and libraries (for unsponsored research) pay publishers directly. Data is used in article "If Research Libraries an Funders Finance Open Access.
DOI: 10.6084/m9.figshare.5965474.v1
title: Data Set for "If Research Libraries and Funders Finance Open Access"

description: Revised data on funders and revenue for articles published by eLife and PLOS, and aggregated by BioOne for 2015, as part of a model for open access publishing in which funders and libraries (for unsponsored research) pay publishers directly. Data is used in article "If Research Libraries an Funders Finance Open Access.
DOI: 10.6084/m9.figshare.5965462
title: Slow and Deliberate Cooperation in the Commons

description: Data for the manuscript
DOI: 10.6084/m9.figshare.5965462.v1
title: Slow and Deliberate Cooperation in the Commons

description: Data for the manuscript
DOI: 10.6084/m9.figshare.5965456
title: Supplemental Table 1 - Armillaria mexicana, a newly described species from Mexico

description: PCR and sequencing primers used for the reactions
DOI: 10.6084/m9.figshare.5965456.v1
title: Supplemental Table 1 - Armillaria mexicana, a newly described species from Mexico

description: PCR and sequencing primers used for the reactions
DOI: 10.6084/m9.figshare.5965450
title: Appl Physiol Nutr Metab DOI: 10.1139/apnm-2017-0696

description: Accepted article and associated data for study to be published in Applied Physiology Nutrition and Metabolism. See article file for details on study procedures and statistical analysis.
DOI: 10.6084/m9.figshare.5965444
title: Article - Exp Physiol 2017, 102.12, pp 1661-71

description: Article published in December 2018 from AHA award# 15BGIA22710012. See article for details of study procedures and statistical analysis. Raw data used for analysis is provided in excel file.
DOI: 10.6084/m9.figshare.5965444.v1
title: Article - Exp Physiol 2017, 102.12, pp 1661-71

description: Article published in December 2018 from AHA award# 15BGIA22710012. See article for details of study procedures and statistical analysis. Raw data used for analysis is provided in excel file.
DOI: 10.6084/m9.figshare.5965441
title: Full-annotated model with security and data-minimization requirequirments

description: SecBPMN2 model enriched with more requirements
DOI: 10.6084/m9.figshare.5965441.v1
title: Full-annotated model with security and data-minimization requirequirments

description: SecBPMN2 model enriched with more requirements
DOI: 10.6084/m9.figshare.5965417
title: Supplemental Figure for AmrZ Motility Manuscript

description: Figure showing normalized motility for an AmrZ deletion strain of Pseudomonas stutzeri as well as complements for this deletion strain. Underlying data is also provided as a .csv file.