cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25386/genetics.12800933
title: Supplemental Material for Slomka et al., 2020

description: File S1 contains supplemental Materials and Methods for the paper. File S2 contains all supplemental Figures (Figures S1-S6).Table S1 contains statistics derived from the growth assays performed on the evolution regimes. Table S2 contains a full list of genetic variations detected in the other-Bacillus evolutionary regime in the different time points.Table S3 contains a full list of all de-novo mutations detected in all evolution lines in the last time point. Table S4 contains a list of HGT fragments and mutations detected in single colonies sequenced in the last time point of the evolution.
DOI: 10.25386/genetics.12800933.v2
title: Supplemental Material for Slomka et al., 2020

description: File S1 contains supplemental Materials and Methods for the paper. File S2 contains all supplemental Figures (Figures S1-S6).Table S1 contains statistics derived from the growth assays performed on the evolution regimes. Table S2 contains a full list of genetic variations detected in the other-Bacillus evolutionary regime in the different time points.Table S3 contains a full list of all de-novo mutations detected in all evolution lines in the last time point. Table S4 contains a list of HGT fragments and mutations detected in single colonies sequenced in the last time point of the evolution.
DOI: 10.25386/genetics.12800933.v1
title: Supplemental Material for Slomka et al., 2020

description: File S1 contains supplemental Materials and Methods for the paper. File S2 contains all supplemental Figures (Figures S1-S6).Table S1 contains statistics derived from the growth assays performed on the evolution regimes. Table S2 contains a full list of genetic variations detected in the other-Bacillus evolutionary regime in the different time points.Table S3 contains a full list of all de-novo mutations detected in all evolution lines in the last time point. Table S4 contains a list of HGT fragments and mutations detected in single colonies sequenced in the last time point of the evolution.
DOI: 10.5281/zenodo.4020613
title: Au, Ag, Cu in He

description: Au, Ag, Cu in He
DOI: 10.5281/zenodo.4020612
title: Au, Ag, Cu in He

description: Au, Ag, Cu in He
DOI: 10.5281/zenodo.4020615
title: Au, Ag, Cu in N2

description: Au, Ag, Cu in N2
DOI: 10.5281/zenodo.4020614
title: Au, Ag, Cu in N2

description: Au, Ag, Cu in N2
DOI: 10.5281/zenodo.4020617
title: Au, Ag, Cu in H2

description: Au, Ag, Cu in H2
DOI: 10.5281/zenodo.4020616
title: Au, Ag, Cu in H2

description: Au, Ag, Cu in H2
DOI: 10.6084/m9.figshare.12933308
title: Saffa et al_data.csv

description: Data used in the study titled ''Fathers invest more than mothers into children with names identical to their own''.
DOI: 10.6084/m9.figshare.12933284.v1
title: Toxicity mitigation by N-acetylcysteine and synergistic toxic effect of nano and bulk ZnO to Panagrellus redivivus

description: Our studies have shown that NAC can mitigate the toxic effects of both studied particle sizes. In the applied concentrations, ZnCl<sub>2</sub> was less toxic than both of the ZnO particles. This finding indicates that not only ions and ROS produced by the dissolution are behind the toxic effects of the ZnO NPs, but other particle size-dependent toxic effects, like the spontaneous ROS generation, are also relevant. When the two materials were applied in binary mixtures, the toxic effects increased significantly, the dissolved zinc content and the ROS generation also increased. It is assumed that the chemical and physical properties of the materials have been mutually reinforcing to form a more reactive mixture that is more toxic to the <i>P. redivivus </i>test organism.
DOI: 10.6084/m9.figshare.12933284
title: Toxicity mitigation by N-acetylcysteine and synergistic toxic effect of nano and bulk ZnO to Panagrellus redivivus

description: Our studies have shown that NAC can mitigate the toxic effects of both studied particle sizes. In the applied concentrations, ZnCl<sub>2</sub> was less toxic than both of the ZnO particles. This finding indicates that not only ions and ROS produced by the dissolution are behind the toxic effects of the ZnO NPs, but other particle size-dependent toxic effects, like the spontaneous ROS generation, are also relevant. When the two materials were applied in binary mixtures, the toxic effects increased significantly, the dissolved zinc content and the ROS generation also increased. It is assumed that the chemical and physical properties of the materials have been mutually reinforcing to form a more reactive mixture that is more toxic to the <i>P. redivivus </i>test organism.
DOI: 10.6084/m9.figshare.12933293
title: Isotopes Data from Ancient Lebanon

description: Isotopes data for radiocarbon dated samples from ancient Lebanon
DOI: 10.17043/stordalen-lakes-ch4-ebul-3
title: Methane bubble fluxes from subarctic lakes on the Stordalen Mire, Abisko, Northern Sweden
DOI: 10.5281/zenodo.3962798
title: Data supporting: Isotopic insights on continental water sources and transport in the mountains and plains of southern South America

description: The data presented here comprises the stable isotopic composition (δ<sup>2</sup>H and δ<sup>18</sup>O) of 1659 samples of precipitation, rivers, groundwater and lakes/ponds samples from a total of 511 sites. This is a composite dataset that includes data from the Global Network of Isotopes in Precipitation (GNIP) and Rivers (GNIR) databases (IAEA/WMO 2019), data extracted from different published articles (cited therein) and data obtained directly by the authors as part of different previous and ongoing projects of our own lab (GEA, IMASL). Excel sheet 1 shows a description/overview of the dataset as displayed in Table 1. Excel sheet 2 shows the dataset, which includes a unique identifying code, type of water sample (precipitation, rivers, groundwater, and lakes), name of location, sampling point date, latitude, longitude and elevation, and the dual isotopic composition (δ<sup>2</sup>H and δ<sup>18</sup>O). This dataset supports: Poca M, Nosetto MD, Ballesteros S, Castellanos G, Jobbágy EG. <em>Isotopic insights on continental water sources and transport in the mountains and plains of southern South America.</em> Isotopes in Environmental and Health Studies (IEHS). DOI:10.1080/10256016.2020.1819264 We acknowledge all contributing researchers to GNIP and GNIR databases, as well as the effort of the IAEA for initiating and maintaining these open access global initiatives. We also acknowledge the authors of the papers cited in the dataset and all GEA lab staff that contributed to the sampling and/or to measuring the stable isotopic compositions of waters included in this database. This work was supported by Fondo para la Investigación Científica y Tecnológica under FONCyT-Grant BID PICT-2018-03143. For any query, please contact María Poca at: pocamaria@gmail.com
DOI: 10.5281/zenodo.3953023
title: Data supporting: Isotopic insights on continental water sources and transport in the mountains and plains of southern South America

description: The data presented here comprises the stable isotopic composition (δ<sup>2</sup>H and δ<sup>18</sup>O) of 1659 samples of precipitation, rivers, groundwater and lakes/ponds samples from a total of 511 sites. This is a composite dataset that includes data from the Global Network of Isotopes in Precipitation (GNIP) and Rivers (GNIR) databases (IAEA/WMO 2019), data extracted from different published articles (cited therein) and data obtained directly by the authors as part of different previous and ongoing projects of our own lab (GEA, IMASL). Excel sheet 1 shows a description/overview of the dataset as displayed in Table 1. Excel sheet 2 shows the dataset, which includes a unique identifying code, type of water sample (precipitation, rivers, groundwater, and lakes), name of location, sampling point date, latitude, longitude and elevation, and the dual isotopic composition (δ<sup>2</sup>H and δ<sup>18</sup>O). This dataset supports: Poca M, Nosetto MD, Ballesteros S, Castellanos G, Jobbágy EG. <em>Isotopic insights on continental water sources and transport in the mountains and plains of southern South America.</em> Isotopes in Environmental and Health Studies (IEHS). DOI:10.1080/10256016.2020.1819264 We acknowledge all contributing researchers to GNIP and GNIR databases, as well as the effort of the IAEA for initiating and maintaining these open access global initiatives. We also acknowledge the authors of the papers cited in the dataset and all GEA lab staff that contributed to the sampling and/or to measuring the stable isotopic compositions of waters included in this database. This work was supported by Fondo para la Investigación Científica y Tecnológica under FONCyT-Grant BID PICT-2018-03143. For any query, please contact María Poca at: pocamaria@gmail.com
DOI: 10.25345/c5xb4v
title: MassIVE MSV000086110 - JH_rosemary_biochemometrics_UHPLC_HRMS_dataset
title: Dataset used for biochemometric analyses on the extract and fractions of Rosmarinus officinalis (Salvia rosmarinus) tested against MRSA.
DOI: 10.5281/zenodo.1212427
title: Binary black-hole simulation SXS:BBH:0001

description: Simulation of a black-hole binary system evolved by the SpEC code.
DOI: 10.15131/shef.data.12927365
title: Data for the paper: "Bone remodelling in the mouse tibia is spatio-temporally modulated by oestrogen deficiency and external mechanical loading: a combined in vivo/ in silico study"

description: Data used in the paper : "Bone remodelling in the mouse tibia is spatio-temporally modulated by oestrogen deficiency and external mechanical loading: a combined in vivo/ in silico study"<br>by<br>Vee San Cheong, Bryant Roberts, Visakan Kadirkamanathan, Enrico Dall'Ara<br>published in Acta Biomaterialia<br><br>We share here an example of in vivo microCT images collected for a mouse that underwent ovariectomy at week 14 of age and mechanical loading at week 19 and 21 of age. In vivo 3D microCT images of the mouse tibia have been acquired at week 14, 18, 20, and 22 of age. The registered and cropped images are reported here.<br>In case the reader is interested in the whole database they should contact Dr Enrico Dall'Ara (e.dallara@sheffield.ac.uk).
DOI: 10.15131/shef.data.12927365.v1
title: Data for the paper: "Bone remodelling in the mouse tibia is spatio-temporally modulated by oestrogen deficiency and external mechanical loading: a combined in vivo/ in silico study"

description: Data used in the paper : "Bone remodelling in the mouse tibia is spatio-temporally modulated by oestrogen deficiency and external mechanical loading: a combined in vivo/ in silico study"<br>by<br>Vee San Cheong, Bryant Roberts, Visakan Kadirkamanathan, Enrico Dall'Ara<br>published in Acta Biomaterialia<br><br>We share here an example of in vivo microCT images collected for a mouse that underwent ovariectomy at week 14 of age and mechanical loading at week 19 and 21 of age. In vivo 3D microCT images of the mouse tibia have been acquired at week 14, 18, 20, and 22 of age. The registered and cropped images are reported here.<br>In case the reader is interested in the whole database they should contact Dr Enrico Dall'Ara (e.dallara@sheffield.ac.uk).
DOI: 10.5281/zenodo.3979375
title: Inducible TDG knockout models to study epigenetic regulation

description: Mechanistic and functional studies by gene disruption or editing approaches often suffer from confounding effects like compensatory cellular adaptations generated by clonal selection. These issues become particularly relevant when studying factors directly involved in genetic or epigenetic maintenance. To provide a genetic tool for functional and mechanistic investigation of DNA repair mediated active DNA demethylation, we generated a <em>Tdg </em>minigene model in mice and mouse embryonic stem cells (ESCs). The floxed <em>miniTdg</em> is rapidly and reliably excised by tamoxifen-induced Cre expression in mice and ESCs, depleting TDG to undetectable levels within 24 hours of induction. We describe the functionality of the engineered <em>miniTdg</em> in mouse and ESCs (TDGiKO ESCs) and validate the pluripotency and differentiation potential of TDGiKO ESCs as well as the phenotype of induced TDG depletion. The controlled and rapid depletion of TDG allows for a precise manipulation at any time point in multistep experimental procedures as presented here for neuronal differentiation <em>in vitro</em>. Thus, we provide a thoroughly validate d genetic tool for the functional and mechanistic investigation of TDG in active DNA (de)methylation and/or DNA repair with minimal interference from adaptive effects and clonal selection.
DOI: 10.34740/kaggle/dsv/125564
title: Science videos caption collection
DOI: 10.5517/ccdc.csd.cc23ywnm
title: CCDC 1965141: Experimental Crystal Structure Determination

description: Related Article: D. Shalini, P. Vinothkumar, K. Sathyamoorthy, P. Murali Manohar, Tejaswi Ashok Hegde, G. Vinitha, Manoj Mohapatra, Priya Murugasen|2020|J.Mol.Struct.|1225|129098|doi:10.1016/j.molstruc.2020.129098
DOI: 10.5517/ccdc.csd.cc244zr1
title: CCDC 1971003: Experimental Crystal Structure Determination

description: Related Article: Dachao Hong, Yoshihiro Shimoyama, Yuji Ohgomori, Ryoichi Kanega, Hiroaki Kotani, Tomoya Ishizuka, Yoshihiro Kon, Yuichiro Himeda, Takahiko Kojima|2020|Inorg.Chem.|59|11976|doi:10.1021/acs.inorgchem.0c00812
DOI: 10.5517/ccdc.csd.cc244zs2
title: CCDC 1971004: Experimental Crystal Structure Determination

description: Related Article: Dachao Hong, Yoshihiro Shimoyama, Yuji Ohgomori, Ryoichi Kanega, Hiroaki Kotani, Tomoya Ishizuka, Yoshihiro Kon, Yuichiro Himeda, Takahiko Kojima|2020|Inorg.Chem.|59|11976|doi:10.1021/acs.inorgchem.0c00812
DOI: 10.5517/ccdc.csd.cc244zt3
title: CCDC 1971005: Experimental Crystal Structure Determination

description: Related Article: Dachao Hong, Yoshihiro Shimoyama, Yuji Ohgomori, Ryoichi Kanega, Hiroaki Kotani, Tomoya Ishizuka, Yoshihiro Kon, Yuichiro Himeda, Takahiko Kojima|2020|Inorg.Chem.|59|11976|doi:10.1021/acs.inorgchem.0c00812
DOI: 10.5517/ccdc.csd.cc24xbp3
title: CCDC 1993445: Experimental Crystal Structure Determination

description: Related Article: Mohit Saroha, Jayant Sindhu, Parvin Kumar, J M Khurana|2021|J.Mol.Struct.|1225|129089|doi:10.1016/j.molstruc.2020.129089
DOI: 10.5517/ccdc.csd.cc13dpjq
title: CCDC 1025093: Experimental Crystal Structure Determination

description: Related Article: C.S. Karthik, Karthik Kumara, S. Naveen, L. Mallesha, P. Mallu, M.V. Deepa Urs, N.K. Lokanath|2021|J.Mol.Struct.|1224|129077|doi:10.1016/j.molstruc.2020.129077
DOI: 10.5517/ccdc.csd.cc254zlx
title: CCDC 2000789: Experimental Crystal Structure Determination

description: Related Article: yuefang Wei|2020|CSD Communication|||
DOI: 10.5517/ccdc.csd.cc254zr2
title: CCDC 2000794: Experimental Crystal Structure Determination

description: Related Article: Le Zhou|2020|CSD Communication|||
DOI: 10.6084/m9.figshare.7068170
title: Interview - Cathal Gurrin

description: This dataset 'Interview - Cathal Gurrin’ is a component of a Doctor Of Philosophy conducted by candidate Alexander Hayes (3919493) titled 'The Socioethical Implications Of Body Worn Computers: An Ethnographic Study'. <br>The full thesis can be accessed at https://ro.uow.edu.au/theses1/853<br>This research was conducted in the Faculty of Engineering and Information Systems, School of Computing and Information Technology (SCIT), University of Wollongong with research strength Innovation in Business & Social Research under Principal Supervisor Professor Katina Michael (University of Wollongong) and Associate Supervisor Dr Teemu Leinonen (Aalto University Finland). This thesis explores the socioethical implications of body worn computers (BWC) using an ethnographic approach. Furthermore, a subset, body worn cameras (BWCs), combines data with value added constancy through Location Based Services (LBS) over wireless network connections. The aim of this investigation was to engage global leaders from transdisciplinary stakeholder groups in semi-structured interviews, conversations and events, situating a review of the social impact and ethical implications of BWCs. A critical discourse analysis using a Foucauldian approach reveals power relations, which are then infused through narrative with unique intercultural perspectives, differentiating ‘location’ from ‘place’. The author of this study has subsequently identified through Grounded Theory that BWCs are causal agency for disconnect from proper culture which can be addressed through the application of Ngikalikarra, a unique framework for empathetic understanding of place and community engagement.
DOI: 10.6084/m9.figshare.7068170.v1
title: Interview - Cathal Gurrin

description: This dataset 'Interview - Cathal Gurrin’ is a component of a Doctor Of Philosophy conducted by candidate Alexander Hayes (3919493) titled 'The Socioethical Implications Of Body Worn Computers: An Ethnographic Study'. <br>The full thesis can be accessed at https://ro.uow.edu.au/theses1/853<br>This research was conducted in the Faculty of Engineering and Information Systems, School of Computing and Information Technology (SCIT), University of Wollongong with research strength Innovation in Business & Social Research under Principal Supervisor Professor Katina Michael (University of Wollongong) and Associate Supervisor Dr Teemu Leinonen (Aalto University Finland). This thesis explores the socioethical implications of body worn computers (BWC) using an ethnographic approach. Furthermore, a subset, body worn cameras (BWCs), combines data with value added constancy through Location Based Services (LBS) over wireless network connections. The aim of this investigation was to engage global leaders from transdisciplinary stakeholder groups in semi-structured interviews, conversations and events, situating a review of the social impact and ethical implications of BWCs. A critical discourse analysis using a Foucauldian approach reveals power relations, which are then infused through narrative with unique intercultural perspectives, differentiating ‘location’ from ‘place’. The author of this study has subsequently identified through Grounded Theory that BWCs are causal agency for disconnect from proper culture which can be addressed through the application of Ngikalikarra, a unique framework for empathetic understanding of place and community engagement.
DOI: 10.6084/m9.figshare.7882781
title: VTKEL: 30K documents dataset for Visual-Textual-Knowledge Entity Linking

description: (Updated version, after fixed some bugs)VTKL dataset, contains documents composed of pictures with five corresponding textual captions for each image. The VTKL dataset is obtained by extending the Flikr30k dataset, designed for visual-textual mention alignment, with links to YAGO ontolgy, one of the largest <em>web knowledge base</em>. These links are obtained automatically by processing each image caption with PIKES, an <em>NLP</em> tool for <em>entity recognition</em> and <em>linking</em>.<br>
DOI: 10.6084/m9.figshare.7882781.v5
title: VTKEL: 30K documents dataset for Visual-Textual-Knowledge Entity Linking

description: VTKL dataset, contains documents composed of pictures with five corresponding textual captions for each image. The VTKL dataset is obtained by extending the Flikr30k dataset, designed for visual-textual mention alignment, with links to YAGO ontolgy, one of the largest <em>web knowledge base</em>. These links are obtained automatically by processing each image caption with PIKES, an <em>NLP</em> tool for <em>entity recognition</em> and <em>linking</em>.
DOI: 10.6084/m9.figshare.10318985
title: VTKEL* dataset

description: <b>VTKEL* dataset with 1000 documents.</b><b>(updated version after fixed some bugs from previous version)</b>VTKL* dataset, contains documents composed of pictures with five corresponding textual captions for each image. The VTKL* dataset is obtained from 30K VTKEL dataset designed for visual-textual mention alignment, with links to YAGO ontology, one of the largest <em>web knowledge base</em>. The links are checked manually and fixed the wrong by processing each image caption with PIKES, an <em>NLP</em> tool for <em>entity recognition</em> and <em>linking</em>.<b></b><i></i><sub></sub><sup></sup><br>
DOI: 10.6084/m9.figshare.10318985.v5
title: VTKEL* dataset

description: <b>VTKEL* dataset with 1000 documents.</b><b>(updated version after fixed some bugs from previous version)</b>VTKL* dataset, contains documents composed of pictures with five corresponding textual captions for each image. The VTKL* dataset is obtained from 30K VTKEL dataset designed for visual-textual mention alignment, with links to YAGO ontology, one of the largest <em>web knowledge base</em>. The links are checked manually and fixed the wrong by processing each image caption with PIKES, an <em>NLP</em> tool for <em>entity recognition</em> and <em>linking</em>.<b></b><i></i><sub></sub><sup></sup><br>
DOI: 10.6084/m9.figshare.10318985.v4
title: VTKEL* dataset

description: <b>VTKEL* dataset with 1000 documents.</b><b>(updated version after fixing errors from Flickr30k-entity dataset)</b>VTKL* dataset, contains documents composed of pictures with five corresponding textual captions for each image. The VTKL* dataset is obtained from 30K VTKEL dataset designed for visual-textual mention alignment, with links to YAGO ontology, one of the largest <em>web knowledge base</em>. The links are checked manually and fixed the wrong by processing each image caption with PIKES, an <em>NLP</em> tool for <em>entity recognition</em> and <em>linking</em>.<b></b><i></i><sub></sub><sup></sup><br>