cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57760/sciencedb.02343
title: Journal Data Policy for Depositing & Sharing Paper Related Data (Template)
title: 科技期刊论文关联数据存缴共享政策

description: Based on long-term research and practice, our team proposed a Journal Data Policy Template for Depositing & Sharing Paper Related Data, and it is a general data policy framework for different journals. According to the different intensities of sharing related data of papers, this policy framework divides into five levels, with the intensity decreasing from level 1 to level 5. According to the actual situation of each journal, the editorial department of the journal could select the corresponding strength level of the data policy, and then select the content of the policy text contained in this level. The V2 version of the data policy has revised the problems and optimized the first version. The V3 version has updated the data policy grading table. The V4 version has optimized the data policy grading table, partial expression and provided bilingual data policy templates in Chinese and English. The V5 version has added new features such as data peer review and data identifiers, and updated the data policy classification table.
description: Based on long-term research and practice, our team proposed a Journal Data Policy Template for Depositing & Sharing Paper Related Data, and it is a general data policy framework for different journals. According to the different intensities of sharing related data of papers, this policy framework divides into five levels, with the intensity decreasing from level 1 to level 5. According to the actual situation of each journal, the editorial department of the journal could select the corresponding strength level of the data policy, and then select the content of the policy text contained in this level. The V2 version of the data policy has revised the problems and optimized the first version. The V3 version has updated the data policy grading table. The V4 version has optimized the data policy grading table, partial expression and provided bilingual data policy templates in Chinese and English. The V5 version has added new features such as data peer review and data identifiers, and updated the data policy classification table.
DOI: 10.5281/zenodo.15029877
title: Towards Supporting Open Source Library Maintainers with Community-Based Analytics

description: Overview

This replication package contains data and scripts used in our study. The package is structured into four main components.

Folder Structure

1. Data





ProcessedData: Contains refined datasets that guide our research questions.




RawData: Contains raw scraped data about dependents from GitHub, selected for analysis.



2. RepoClonerDataAnalyser





The starting repository for the study.




Select the top 10 libraries and their dependents.




Clones repositories and analyzes all research questions.




Implemented in Python.



3. methodTypeResolutionJavaParser





A Java project used for method resolution.




This tool is used for parsing and resolving method types after cloning repositories and filtering potential Java files using the RepoClonerDataAnalyzer project.



4. JacocoCoverageReporter





Converts raw JaCoCo HTML coverage reports into CSV format.


Implemented in Python 


5. Survey Forms



Contains pdf version of survey forms that was shared to maintainers.


Usage Instructions

Each project within this package has its own README file with detailed setup and execution instructions. Below is a high-level guide:





Data Collection: Use RepoClonerDataAnalyser to select, clone, and filter dependents.




Method Resolution: Run methodTypeResolutionJavaParser on filtered Java files.




Coverage Analysis: Use JacocoCoverageReporter to convert JaCoCo HTML reports into CSV format and then Use RepoClonerDataAnalyser for further analysis. 




Data Analysis: Utilize the processed data in the Data folder for research insights.



Requirements





Python 3.x




Java 8+




Required dependencies (listed in individual project README files. In version 1, you might notice a random GitHub repository URL provided in individual README. It is intended solely for context and clarity. It does not lead to an accessible resource and results in a 404 error. We have removed it in version 2 to avoid any confusion.)
DOI: 10.5281/zenodo.16298555
title: Towards Supporting Open Source Library Maintainers with Community-Based Analytics

description: Overview

This replication package contains data and scripts used in our study. The package is structured into four main components.

Folder Structure

1. Data





ProcessedData: Contains refined datasets that guide our research questions.




RawData: Contains raw scraped data about dependents from GitHub, selected for analysis.



2. RepoClonerDataAnalyser





The starting repository for the study.




Select the top 10 libraries and their dependents.




Clones repositories and analyzes all research questions.




Implemented in Python.



3. methodTypeResolutionJavaParser





A Java project used for method resolution.




This tool is used for parsing and resolving method types after cloning repositories and filtering potential Java files using the RepoClonerDataAnalyzer project.



4. JacocoCoverageReporter





Converts raw JaCoCo HTML coverage reports into CSV format.


Implemented in Python 


5. Survey Forms



Contains pdf version of survey forms that was shared to maintainers.


Usage Instructions

Each project within this package has its own README file with detailed setup and execution instructions. Below is a high-level guide:





Data Collection: Use RepoClonerDataAnalyser to select, clone, and filter dependents.




Method Resolution: Run methodTypeResolutionJavaParser on filtered Java files.




Coverage Analysis: Use JacocoCoverageReporter to convert JaCoCo HTML reports into CSV format and then Use RepoClonerDataAnalyser for further analysis. 




Data Analysis: Utilize the processed data in the Data folder for research insights.



Requirements





Python 3.x




Java 8+




Required dependencies (listed in individual project README files. In version 1, you might notice a random GitHub repository URL provided in individual README. It is intended solely for context and clarity. It does not lead to an accessible resource and results in a 404 error. We have removed it in version 2 to avoid any confusion.)
DOI: 10.15468/dl.udsevg
title: Occurrence Download

description: A dataset containing 1690845 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 2020-2024"
 ]
}

 The dataset includes 1690845 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025475-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ktsp7d
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Dicrurus macrocercus)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025505-250717081556266/datasets/export for details.
DOI: 10.15468/dl.c3e8eb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Dicrurus macrocercus)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025507-250717081556266/datasets/export for details.
DOI: 10.15468/dl.mbfns5
title: Occurrence Download

description: A dataset containing 388 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Specimen, Occurrence evidence)",
 "Continent is Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Purpuricenus temminckii",
 "Year 1970-2025"
 ]
}

 The dataset includes 388 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025508-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jqa4yq
title: Occurrence Download

description: A dataset containing 227 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ottelia ovalifolia",
 "Country is New Zealand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 227 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025511-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pqpq2u
title: Occurrence Download

description: A dataset containing 125161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Cornus suecica"
 ]
}

 The dataset includes 125161 records from 217 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025410-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q5aj6e
title: Occurrence Download

description: A dataset containing 219 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 {
 "or" : [
 "Geometry POLYGON((-71.56934 -37.38428,-72.58887 -43.25537,-68.37012 -43.43115,-67.52637 -36.82178,-69.84668 -35.02881,-71.56934 -37.38428))",
 "Geometry POLYGON((-54.27246 -25.18506,-55.92481 -26.521,-56.06543 -28.70068,-53.81543 -28.24365,-52.5498 -26.8374,-54.27246 -25.18506))"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "or" : [
 "TaxonKey is Araucaria Juss.",
 "TaxonKey is Araucaria araucana (Molina) K.Koch",
 "TaxonKey is Araucaria angustifolia (Bertol.) Kuntze"
 ]
 }
 ]
}

 The dataset includes 219 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0317553-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xwqv5c
title: Occurrence Download

description: A dataset containing 1011 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Populus euphratica Olivier"
 ]
}

 The dataset includes 1011 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0309110-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3bakvu
title: Occurrence Download

description: A dataset containing 49231 species occurrences available in GBIF matching the query:
{
 "PublishingCountry" : [
 "is North Macedonia"
 ]
}

 The dataset includes 49231 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0277463-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hdqxrj
title: Occurrence Download

description: A dataset containing 183822 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 {
 "or" : [
 "DatasetKey is RU-BIRDS.RU, Birds observations database from Russia and neighboring regions. Zoological Museum of M.V. Lomonosov Moscow State University.",
 "DatasetKey is EOD – eBird Observation Dataset",
 "DatasetKey is iNaturalist Research-grade Observations",
 "DatasetKey is Birds of Northern Eurasia",
 "DatasetKey is Raptors of the World"
 ]
 },
 "OccurrenceStatus is Present",
 {
 "or" : [
 "TaxonKey is Anas platyrhynchos Linnaeus, 1758",
 "TaxonKey is Parus major Linnaeus, 1758",
 "TaxonKey is Turdus pilaris Linnaeus, 1758",
 "TaxonKey is Motacilla alba Linnaeus, 1758",
 "TaxonKey is Corvus cornix Linnaeus, 1758",
 "TaxonKey is Pyrrhula pyrrhula (Linnaeus, 1758)",
 "TaxonKey is Fringilla coelebs Linnaeus, 1758",
 "TaxonKey is Passer montanus (Linnaeus, 1758)",
 "TaxonKey is Milvus migrans (Boddaert, 1783)"
 ]
 }
 ]
}

 The dataset includes 183822 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0088314-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nk75rs
title: Occurrence Download

description: A dataset containing 69888 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trogon massena Gould, 1838"
 ]
}

 The dataset includes 69888 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0400146-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2nqjgf
title: Occurrence Download

description: A dataset containing 3090 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Persicaria lapathifolia (L.) Gray",
 "MediaType is Image",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 3090 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001659-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bddpvs
title: Occurrence Download

description: A dataset containing 1608 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Megascops trichopsis (Wagler, 1832)"
 ]
}

 The dataset includes 1608 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0267997-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mnaddy
title: Occurrence Download

description: A dataset containing 379 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-103.00781 -58.07788,-17.92969 -58.07788,-17.92969 0,-83.14453 5.96575,-103.00781 0,-103.00781 -58.07788))",
 "HasCoordinate is true",
 "TaxonKey is Scleria secans (L.) Urb.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 379 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009373-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fnqc8a
title: Occurrence Download

description: A dataset containing 332 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus nelsonii Shaw"
 ]
}

 The dataset includes 332 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0400148-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xheprt
title: Occurrence Download

description: A dataset containing 110076 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is L. IS dataset. Cyanoprocaryota, Lichens, Bryophyte"
 ]
}

 The dataset includes 110076 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004537-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zh3hwj
title: Occurrence Download

description: A dataset containing 71860 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ailanthus altissima (Mill.) Swingle"
 ]
}

 The dataset includes 71860 records from 232 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0228549-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lwi3aq
title: Occurrence Download

description: A dataset containing 1214 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nicotiana attenuata Torr. ex S.Watson",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 1214 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009373-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4p35tm
title: Occurrence Download

description: A dataset containing 12573 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ambystoma opacum (Gravenhorst, 1807)"
 ]
}

 The dataset includes 12573 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0285329-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2b8fsk
title: Occurrence Download

description: A dataset containing 923 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is South Africa",
 "DatasetKey is EOD – eBird Observation Dataset",
 "GadmGid is ZAF.4_1",
 "TaxonKey is Apalis thoracica (Shaw, 1811)",
 "Year 2000-2018"
 ]
}

 The dataset includes 923 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0254304-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.oourvs
title: Occurrence Download

description: A dataset containing 31601 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Thymus vulgaris L."
 ]
}

 The dataset includes 31601 records from 74 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009373-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.svppak
title: Occurrence Download

description: A dataset containing 4309 species occurrences available in GBIF matching the query:
{
 "PublishingOrg" : [
 "is 24266ce0-38be-11d9-8439-b8a03c50a862"
 ]
}

 The dataset includes 4309 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0258787-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r3z4ev
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euphrasia nepalensis Pugsley"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047996-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8gt5c2
title: Occurrence Download

description: A dataset containing 680 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Anolis concolor Cope, 1862"
 ]
}

 The dataset includes 680 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0292488-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bbmmna
title: Occurrence Download

description: A dataset containing 1168 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pelecanoides garnotii (Lesson, 1828))",
 "DecimalLatitude is greater than or equal to -20.85",
 "DecimalLatitude is less than or equal to 2.46666666666667",
 "DecimalLongitude is greater than or equal to -83.8333333333333",
 "DecimalLongitude is less than or equal to -66.15"
 ]
}

 The dataset includes 1168 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0324086-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lak5dm
title: Occurrence Download

description: A dataset containing 255 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Vigna antunesii Harms",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 255 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009374-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x4oydj
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nashia inaguensis Millsp."
 ]
}

 The dataset includes 49 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004051-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nusxtu
title: Occurrence Download

description: A dataset containing 127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((0.01099 43.2932,-0.78003 42.92425,-0.58228 42.17969,1.61499 42.11452,2.20825 42.73087,2.0105 43.10098,0.5603 43.30919,0.01099 43.2932))",
 "HasGeospatialIssue is false",
 "TaxonKey is Letharia vulpina (L.) Hue"
 ]
}

 The dataset includes 127 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0314960-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.