cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.8324732.v1
title: Transcriptome analysis of self- and cross-pollinated pistils revealing candidate unigenes of self-incompatibility in <i>Camellia oleifera</i>

description: Self-incompatibility (SI) is a mechanism used to prevent inbreeding and promote outcrossing in a wide variety of angiosperms. <i>Camellia oleifera</i> (Theaceae), is one of the most prominent wood oil plants. However, self-incompatibility results in a relatively low ratio of fruit/seed sets to flowers in <i>C. oleifera</i>. In this study, fluorescence microscopy and confocal microscopy were used to observe how pollen tube growth differed between cross- vs. self-pollination events. We found that self-pollen tubes appear twisted and clustered when growing to the base of the style and it is impossible for self-pollen tubes to reach the embryo sac to complete double fertilization. In contrast, pollen tubes from crossing events grow normally and reach the ovary to complete fertilization. We characterised candidate genes related to SI and investigated the underlying mechanisms regulating fertilization by performing RNA-seq on <i>C. oleifera</i>. In addition, we also conducted qRT-PCR on 20 unigenes to validate our RNA-seq data. We identified genes encoding protein kinases and phosphatases, Ca<sup>2+</sup> signaling proteins, transcription factors, CYP family members, and defense-related proteins as candidate genes related to SI in <i>C. oleifera</i>. With these genes identified, more thorough studies of SI mechanisms in <i>C. oleifera</i> have become possible.
DOI: 10.21227/bkxs-g070
title: IEEEXtreme 13: Welcome to IEEEXtreme 13.0

description: This dataset contains a total of 5365 submissions, with 0% correct solutions and 0% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/welcome-ieeextreme-13/ See the included PDF document for details about the original challenge.
DOI: 10.5281/zenodo.10724596
title: Streambank Restoration: Fairbanks Cost-Share Phase 5

description: Streambank Rehabilitation data collected under the AKSSF Grant. AKSSF Streambank Restoration: Fairbanks  Cost-Share Phase 5 (54005). This data and related items of information have not been formally disseminated by NOAA, and do not represent any agency determination, view, or policy. 

These are the final streambank rehabilitation and protection metrics along with the data collected for monitoring past projects for the Fairbanks Cost-Share Phase 5 Project. This work was funded by the Alaska Sustainable Salmon Fund and U.S. Fish and Wildlife Service. This project was a financial incentive and educational outreach program directed towards private landowners and public land managers. The project provided technical expertise about rehabilitation practices, state and federal permitting assistance, and funding for habitat rehabilitation and protection projects along streambanks on the Tanana River Watershed Alaska, USA.
DOI: 10.5281/zenodo.10724597
title: Streambank Restoration: Fairbanks Cost-Share Phase 5

description: Streambank Rehabilitation data collected under the AKSSF Grant. AKSSF Streambank Restoration: Fairbanks  Cost-Share Phase 5 (54005). This data and related items of information have not been formally disseminated by NOAA, and do not represent any agency determination, view, or policy. 

These are the final streambank rehabilitation and protection metrics along with the data collected for monitoring past projects for the Fairbanks Cost-Share Phase 5 Project. This work was funded by the Alaska Sustainable Salmon Fund and U.S. Fish and Wildlife Service. This project was a financial incentive and educational outreach program directed towards private landowners and public land managers. The project provided technical expertise about rehabilitation practices, state and federal permitting assistance, and funding for habitat rehabilitation and protection projects along streambanks on the Tanana River Watershed Alaska, USA.
DOI: 10.6084/m9.figshare.25308472
title: Finger Force Data

description: The data contains the force applied by the fingers during different activities of daily living using FSRs sensors.
DOI: 10.21227/ad3n-9s13
title: IEEEXtreme 14: Social Distancing in Class

description: This dataset contains a total of 1646 submissions, with 0% correct solutions and 54% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/social-distancing/ See the included PDF document for details about the original challenge.
DOI: 10.6084/m9.figshare.23529185
title: Additional file 1 of Comparison of bispectral index and patient state index as measures of sedation depth during surgeries using remimazolam tosilate

description: Additional file 1: Supplementary Figure 1. Intraoperative MAP changes. Supplementary Figure 2. Intraoperative HR changes. Supplementary Figure 3. Intraoperative SpO2 changes. Supplementary Figure 4. Intraoperative PVI changes. Supplementary Table 1. Modified Bromage Scale. Supplementary Table 2. Modified Observer’s Assessment of Alertness/Sedation (MOAA/S) scale. Supplementary Table 3. Laboratory tests of the patient's liver and kidney function.
DOI: 10.6084/m9.figshare.23529185.v1
title: Additional file 1 of Comparison of bispectral index and patient state index as measures of sedation depth during surgeries using remimazolam tosilate

description: Additional file 1: Supplementary Figure 1. Intraoperative MAP changes. Supplementary Figure 2. Intraoperative HR changes. Supplementary Figure 3. Intraoperative SpO2 changes. Supplementary Figure 4. Intraoperative PVI changes. Supplementary Table 1. Modified Bromage Scale. Supplementary Table 2. Modified Observer’s Assessment of Alertness/Sedation (MOAA/S) scale. Supplementary Table 3. Laboratory tests of the patient's liver and kidney function.
DOI: 10.6084/m9.figshare.13043462
title: The square rod-shaped ionic polymer-metal composite and its application in interventional surgical guide device

description: Ionic polymer-metal composite (IPMC) is an electro-active polymer material, which has many advantages such as small size, light weight, low driving voltage, large strain, and good biocompatibility. However, the conventional sheet IPMC has the shortcoming of only bending in the two-dimensional plane, which greatly limits the application of IPMC in the field of interventional surgery. In this work, a square rod-shaped IPMC with multi-degree-of-freedom motion was fabricated, and the displacement and blocking force of the square rod-shaped IPMC in different directions are measured and analyzed under the DC voltage signal. An interventional catheter was designed using the square rod-shaped IPMC in order to achieve active guidance, and a simulation experiment platform and a model of human aorta were built to successfully complete the in vitro simulation experiment of interventional surgery, which preliminarily verified the feasibility of the square rod-shaped IPMC in the field of interventional surgery.
DOI: 10.6084/m9.figshare.13043462.v1
title: The square rod-shaped ionic polymer-metal composite and its application in interventional surgical guide device

description: Ionic polymer-metal composite (IPMC) is an electro-active polymer material, which has many advantages such as small size, light weight, low driving voltage, large strain, and good biocompatibility. However, the conventional sheet IPMC has the shortcoming of only bending in the two-dimensional plane, which greatly limits the application of IPMC in the field of interventional surgery. In this work, a square rod-shaped IPMC with multi-degree-of-freedom motion was fabricated, and the displacement and blocking force of the square rod-shaped IPMC in different directions are measured and analyzed under the DC voltage signal. An interventional catheter was designed using the square rod-shaped IPMC in order to achieve active guidance, and a simulation experiment platform and a model of human aorta were built to successfully complete the in vitro simulation experiment of interventional surgery, which preliminarily verified the feasibility of the square rod-shaped IPMC in the field of interventional surgery.
DOI: 10.21227/e7n8-2p24
title: IEEEXtreme 14: Non-Overlapping Palindromes

description: This dataset contains a total of 4796 submissions, with 3% correct solutions and 55% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/nonoverlapping-palindromes/ See the included PDF document for details about the original challenge.
DOI: 10.21227/3t7m-ya84
title: IEEEXtreme 14: Poker Game

description: This dataset contains a total of 3555 submissions, with 0% correct solutions and 92% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/poker-game/ See the included PDF document for details about the original challenge.
DOI: 10.18434/m357
title: NIST Heat Transmission Properties of Insulating and Building Materials Database - SRD 81
DOI: 10.21227/gga7-dq32
title: IEEEXtreme 14: Restaurant Reopening

description: This dataset contains a total of 403 submissions, with 0% correct solutions and 23% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/restaurant-reopening/ See the included PDF document for details about the original challenge.
DOI: 10.6084/m9.figshare.21432183
title: Electroantennogram and behavioral responses of Plutella xylostella (Lepidoptera: Plutellidae) to volatiles from the non-host plant Mentha spicata (Lamiales: Lamiaceae)

description: data1：Gas chromatography coupled with electroantennographic detection  responses of female adults of P. xylostella to headspace volatiles from wounded M. spicata
data2：Gas chromatography and mass spectrometry
data3：Electroantennogram responses of mated female adults of P. xylostella to the four -active compounds
data4：Y-tube olfactometer assays of mated female adults of P. xylostella to the four -active compounds
data5：The oviposition repellent indices of four active compounds to female adults of P. xylostella
DOI: 10.5281/zenodo.7974646
title: HRMS files obtained from the analysis of polyethylene microplastics exposed to the Mediterranean Sea for 8 weeks

description: These files contain the GC-QTOF-HRMS and LC-QTOF-HRMS data associated with the manuscript:

Screening of organic chemicals associated to virgin low-density polyethylene microplastic pellets exposed to the Mediterranean Sea environment by combining gas chromatography and liquid chromatography coupled to quadrupole-time-of-flight mass spectrometry. Science of the Total Environment. 2024, article number 171250.  https://doi.org/10.1016/j.scitotenv.2024.171250 

It contains the raw GC-HRMS and LC-HRMS files (Agilent format) of polyethylene microplastics (MPs) exposed to the Mediterranean Sea for 8 weeks. For further information on extraction of chemicals from MPs and detailed determination conditions, please read the related publication.

GC-HRMS data was acquired in electron ionization in a 7200 quadrupole time-of-flight (QTOF) mass spectrometer from Agilent Technologies. Both centroid and profile spectra were recorded. Both the raw extract in ethyl acetate and the extract after derivatization with MSTFA were recorded.

These are provided in separate zip files:- GC-QTOF.zip contains data from raw extracts- GC-QTOF_der.zip contains data from derivatized extracts

These Zip files contain 3 replicates of each exposure time (0-8 weeks) and 3 replicates of a blank.

LC-HRMS data was acquired with an Agilent 6550 QTOF in AutoMSMS (data-dependent acquisition, DDA) equiped with an electrospray source in centroid mode only and is stored in the file:- LC-QTOF.zip

These Zip files contain 3 replicates of each exposure time (0, 4 and 8 weeks only) and 3 replicates of a blank, both in positive and negative ionization mode.

If you reuse these data, please cite this dataset (DOI: 10.5281/zenodo.7974647) and the orginal article cited above (DOI: 10.1016/j.scitotenv.2024.171250 )
description: This work was financially supported by Xunta de Galicia (ref. ED431C 2021/06), the Spanish Ministry of Science and Innovation (MCIN) and Spanish State Research Agency (AEI) - MCIN/AEI/10.13039/501100011033 (PID2020-117686RB-C32, PID2020-117686RB-C33, TED2021-131303B-I00, CTM2017-84763-C3-2-R, CTM2017-84763-C3-3-R, CTM2017-90890-REDT and CTM2017-88332-R) and the the Galician Innovation Agency – Xunta de Galicia (001_IN853D-2022). Some of these projects are co-funded by FEDER/EDRF funds.
DOI: 10.5281/zenodo.7974647
title: HRMS files obtained from the analysis of polyethylene microplastics exposed to the Mediterranean Sea for 8 weeks

description: These files contain the GC-QTOF-HRMS and LC-QTOF-HRMS data associated with the manuscript:

Screening of organic chemicals associated to virgin low-density polyethylene microplastic pellets exposed to the Mediterranean Sea environment by combining gas chromatography and liquid chromatography coupled to quadrupole-time-of-flight mass spectrometry. Science of the Total Environment. 2024, article number 171250.  https://doi.org/10.1016/j.scitotenv.2024.171250 

It contains the raw GC-HRMS and LC-HRMS files (Agilent format) of polyethylene microplastics (MPs) exposed to the Mediterranean Sea for 8 weeks. For further information on extraction of chemicals from MPs and detailed determination conditions, please read the related publication.

GC-HRMS data was acquired in electron ionization in a 7200 quadrupole time-of-flight (QTOF) mass spectrometer from Agilent Technologies. Both centroid and profile spectra were recorded. Both the raw extract in ethyl acetate and the extract after derivatization with MSTFA were recorded.

These are provided in separate zip files:- GC-QTOF.zip contains data from raw extracts- GC-QTOF_der.zip contains data from derivatized extracts

These Zip files contain 3 replicates of each exposure time (0-8 weeks) and 3 replicates of a blank.

LC-HRMS data was acquired with an Agilent 6550 QTOF in AutoMSMS (data-dependent acquisition, DDA) equiped with an electrospray source in centroid mode only and is stored in the file:- LC-QTOF.zip

These Zip files contain 3 replicates of each exposure time (0, 4 and 8 weeks only) and 3 replicates of a blank, both in positive and negative ionization mode.

If you reuse these data, please cite this dataset (DOI: 10.5281/zenodo.7974647) and the orginal article cited above (DOI: 10.1016/j.scitotenv.2024.171250 )
description: This work was financially supported by Xunta de Galicia (ref. ED431C 2021/06), the Spanish Ministry of Science and Innovation (MCIN) and Spanish State Research Agency (AEI) - MCIN/AEI/10.13039/501100011033 (PID2020-117686RB-C32, PID2020-117686RB-C33, TED2021-131303B-I00, CTM2017-84763-C3-2-R, CTM2017-84763-C3-3-R, CTM2017-90890-REDT and CTM2017-88332-R) and the the Galician Innovation Agency – Xunta de Galicia (001_IN853D-2022). Some of these projects are co-funded by FEDER/EDRF funds.
DOI: 10.6084/m9.figshare.8849300
title: Additional file 1: of Propofol attenuated TNF-α-modulated occludin expression by inhibiting Hif-1α/ VEGF/ VEGFR-2/ ERK signaling pathway in hCMEC/D3 cells

description: Figure S1. (a) TNF-α had no effect on the expression of claudin-5 in hCMEC/D3 cells. The hCMEC/D3 cells were treated with different concentrations of TNF-α (10, 50 and 100 ng/ml) for 8 h. Left side shows the image of a representative Western blot for claudin-5; right side is the plot of normalized ratios of optical densities. (b) TNF-α could decrease the expression of ZO-1, while propofol could not attenuate it. Left side is the protein expression of ZO-1 in hCMEC/D3 cells that treated with TNF-α and propofol; right side is the plot of normalized ratios of optical densities. β-actin was served as internal loading control. Data was repressed as the mean ± SD. *p &lt; 0.05, compared with the control group. Each assay was performed in five replicates. (ZIP 598 kb)
DOI: 10.6084/m9.figshare.8849300.v1
title: Additional file 1: of Propofol attenuated TNF-α-modulated occludin expression by inhibiting Hif-1α/ VEGF/ VEGFR-2/ ERK signaling pathway in hCMEC/D3 cells

description: Figure S1. (a) TNF-α had no effect on the expression of claudin-5 in hCMEC/D3 cells. The hCMEC/D3 cells were treated with different concentrations of TNF-α (10, 50 and 100 ng/ml) for 8 h. Left side shows the image of a representative Western blot for claudin-5; right side is the plot of normalized ratios of optical densities. (b) TNF-α could decrease the expression of ZO-1, while propofol could not attenuate it. Left side is the protein expression of ZO-1 in hCMEC/D3 cells that treated with TNF-α and propofol; right side is the plot of normalized ratios of optical densities. β-actin was served as internal loading control. Data was repressed as the mean ± SD. *p &lt; 0.05, compared with the control group. Each assay was performed in five replicates. (ZIP 598 kb)
DOI: 10.21227/6z5w-vk33
title: IEEEXtreme 14: Rescue Mission

description: This dataset contains a total of 2345 submissions, with 3% correct solutions and 56% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/rescue-mission/ See the included PDF document for details about the original challenge.
DOI: 10.21227/y2ck-kb29
title: IEEEXtreme 14: Rotational Lights

description: This dataset contains a total of 6954 submissions, with 2% correct solutions and 77% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/rotational-lights/ See the included PDF document for details about the original challenge.
DOI: 10.21227/zj4a-9k60
title: IEEEXtreme 14: Mosaic Decoration III

description: This dataset contains a total of 1707 submissions, with 4% correct solutions and 61% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/mosaic3/ See the included PDF document for details about the original challenge.
DOI: 10.6084/m9.figshare.12519428
title: Additional file 2 of MiRNA155HG polymorphisms influenced the risk of liver cancer among the Han Chinese population

description: Additional file 2: Table 2. the Genetic polymorphisms of eight locus in 432 liver cancer cases and 430 healthy controls
DOI: 10.6084/m9.figshare.12519428.v1
title: Additional file 2 of MiRNA155HG polymorphisms influenced the risk of liver cancer among the Han Chinese population

description: Additional file 2: Table 2. the Genetic polymorphisms of eight locus in 432 liver cancer cases and 430 healthy controls
DOI: 10.6084/m9.figshare.8849426
title: Additional file 1: of T cells expressing NKG2D chimeric antigen receptors efficiently eliminate glioblastoma and cancer stem cells

description: Table S1. List of antibodies used in this study. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.8849426.v1
title: Additional file 1: of T cells expressing NKG2D chimeric antigen receptors efficiently eliminate glioblastoma and cancer stem cells

description: Table S1. List of antibodies used in this study. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.8849432
title: Additional file 2: of T cells expressing NKG2D chimeric antigen receptors efficiently eliminate glioblastoma and cancer stem cells

description: Table S2. Primers used in this study for real-time PCR. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.8849432.v1
title: Additional file 2: of T cells expressing NKG2D chimeric antigen receptors efficiently eliminate glioblastoma and cancer stem cells

description: Table S2. Primers used in this study for real-time PCR. (XLSX 14 kb)
DOI: 10.21227/7frd-tt75
title: IEEEXtreme 14: Parkour

description: This dataset contains a total of 1746 submissions, with 1% correct solutions and 35% partial solutions. Link to the original challenge: https://csacademy.com/ieeextreme-practice/task/parkour/ See the included PDF document for details about the original challenge.
DOI: 10.6084/m9.figshare.11470896
title: MOESM1 of Identification and characterization of the TCA cycle genes in maize

description: Additional file 1. All primers used in this experiment.
DOI: 10.6084/m9.figshare.11470896.v1
title: MOESM1 of Identification and characterization of the TCA cycle genes in maize

description: Additional file 1. All primers used in this experiment.
DOI: 10.6084/m9.figshare.11470905
title: MOESM2 of Identification and characterization of the TCA cycle genes in maize

description: Additional file 2. Identification and annotations of maize and tomato TCA cycle genes.
DOI: 10.6084/m9.figshare.11470905.v1
title: MOESM2 of Identification and characterization of the TCA cycle genes in maize

description: Additional file 2. Identification and annotations of maize and tomato TCA cycle genes.
DOI: 10.6084/m9.figshare.13013187
title: Effects of energy-based ablation on thyroid function in treating benign thyroid nodules: a systematic review and meta-analysis

description: Whether thyroid function would be affected by ablation remains controversial. This systematic review and meta-analysis aimed to investigate the effects of energy-based ablation on thyroid function in treating benign thyroid nodules. EMBASE, PubMed, Cochrane Library, and Web of Science databases were searched. The mean difference (MD) or standard MD (SMD) was applied to assess changes in thyroid function, thyroglobulin (Tg), and antibodies after ablation. RevMan version 5.3 was used for data synthesis. Forty-two studies involving 6380 patients were eligible. The pooled results revealed significant decrease of 1-day thyroid-stimulating hormone (95% CI, −0.67 to −0.14), significant increase of 1-day, 1-week, and 1-month free thyroxine (95% CI, 1.57 to 5.28; 95% CI, 0.61 to 2.42; 95% CI, −0.76 to −0.15), 1-day and 1-week Tg level (95% CI, 0.40 to 0.81; 95% CI, 0.21 to 1.29), 6-month anti-thyroglobulin antibodies (95% CI, 0.02 to 0.26), 1- and 3-month thyroperoxidase antibody (95% CI, 0.02 to 0.22; 95% CI, 0.17 to 0.43), and 1-day, 1-, and 3-month thyrotrophin receptor antibody (95% CI, 0.10 to 0.43; 95% CI, 0.00 to 0.30; 95% CI, 0.13 to 0.36) after ablation. No statistically significant differences were found in these six indicators in the longer term. The results of subgroup analysis were similar to the pooled results. No significant publication bias was found. Energy-based ablation was more likely to have negative effects on thyroid function and antibodies and led to transient increase in Tg level in the short term. However, most of the patients would not develop any thyroid dysfunction in the long-term follow-up.
DOI: 10.6073/pasta/1f10cb47b9e121f3ea0361eeb1cc7be6
title: Plant aboveground biomass data: Biodiversity II: Effects of Plant Biodiversity on Population and Ecosystem Processes

description: Biodiversity II (E120) is designed to determine how the number of plant species affects the dynamics of ecological processes at the population, community, and ecosystem levels. By experimentally manipulating the number of species and the kinds of species, the amount of plant growth and the change from year to year, that result can be examined. Plots are large (9m x 9m actively maintained) and well-replicated, allowing responses of plant pathogens, insect herbivores, seed predators, soil parameters, invasive plant species and other variables to also be studied. Plots were seeded in May 1994 to have 1, 2, 4, 8, or 16 species, with roughly 30 replicates of each diversity level. The species composition of each plot was chosen by random draw from a pool of 18 grassland perennials that included four warm-season (C4) grasses, four cool-season (C3) grasses, four legumes, four non-legume forbs, and two woody species. All species occur in monoculture allowing comparison of responses of each species in monoculture to combinations of these same species. The experiment was established in 1994 by the lead investigators David Tilman, Peter Reich, Johannes Knops, and David Wedin. Experiment 120 is similar to Experiment 123, but it uses larger plots to provide a large capacity for long-term subexperiments.