cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22615570
title: Additional file 10 of Dynamics of rice microbiomes reveal core vertically transmitted seed endophytes

description: Additional file 10: Supplementary Table 1. Total number of reads and read length before and after quality checking and normalization.
DOI: 10.6084/m9.figshare.22616021
title: Additional file 3 of Transcriptional networks orchestrating red and pink testa color in peanut

description: Additional file 3: Table S2. Expression level of DEGS in all comparison groups with red and pink testa peanuts.
DOI: 10.6084/m9.figshare.22615352
title: Additional file 5 of GACNNMDA: a computational model for predicting potential human microbe-drug associations based on graph attention network and CNN-based classifier

description: Additional file 5: The newly downloaded dataset of drug-drug interactions.
DOI: 10.6084/m9.figshare.22616021.v1
title: Additional file 3 of Transcriptional networks orchestrating red and pink testa color in peanut

description: Additional file 3: Table S2. Expression level of DEGS in all comparison groups with red and pink testa peanuts.
DOI: 10.6084/m9.figshare.22615352.v1
title: Additional file 5 of GACNNMDA: a computational model for predicting potential human microbe-drug associations based on graph attention network and CNN-based classifier

description: Additional file 5: The newly downloaded dataset of drug-drug interactions.
DOI: 10.6084/m9.figshare.22616030.v1
title: Additional file 6 of Transcriptional networks orchestrating red and pink testa color in peanut

description: Additional file 6: Table S5. DEGS distribution into different KEGG pathways between bulk pink-vs-bulk red testa peanuts.
DOI: 10.6084/m9.figshare.22616018.v1
title: Additional file 2 of Transcriptional networks orchestrating red and pink testa color in peanut

description: Additional file 2: Table S1. Statistics of up-regulated and down-regulated differentially expressed genes (DEGs) in each comparison group.
DOI: 10.6084/m9.figshare.22614992
title: Additional file 7 of Transcriptomics and metabolomics reveal changes in the regulatory mechanisms of osteosarcoma under different culture methods in vitro

description: Additional file 7: Table S3. Pathway information from combined transcriptome with metabolomics analysis.
DOI: 10.6084/m9.figshare.22616036.v1
title: Additional file 8 of Transcriptional networks orchestrating red and pink testa color in peanut

description: Additional file 8: Table S7. KEGG pathway enrichment of DEGs involved in phenylpropanoid and flavonoid/anthocyanin biosynthetic pathways.
DOI: 10.15131/shef.data.23624259.v2
title: Dataset for Self-assembled InAs QDs on InGaAsP/InP(100) by modified droplet epitaxy in MOVPE around the telecom C-band for quantum photonic application

description: Dataset for Self-assembled InAs QDs on InGaAsP/InP(100) by modified droplet epitaxy in MOVPE around the telecom C-band for quantum photonic application
DOI: 10.6084/m9.figshare.22615010
title: Additional file 1 of Assessing Epstein–Barr virus in gastric cancer: clinicopathological features and prognostic implications

description: Additional file1. Relationship between EBV infection and clinicopathologic characteristics.
DOI: 10.6084/m9.figshare.22615579.v1
title: Additional file 13 of Dynamics of rice microbiomes reveal core vertically transmitted seed endophytes

description: Additional file 13: Supplementary Table 4. Taxonomic composition of the bacterial communities under different plant microhabitats, locations at the class or genus level.
DOI: 10.6084/m9.figshare.22615013.v1
title: Additional file 2 of Assessing Epstein–Barr virus in gastric cancer: clinicopathological features and prognostic implications

description: Additional file2. Univariate and multivariate analysis of overall survival-related factors.
DOI: 10.6084/m9.figshare.22615016.v1
title: Additional file 3 of Assessing Epstein–Barr virus in gastric cancer: clinicopathological features and prognostic implications

description: Additional file3. Analysis of univariate and multivariate factors affecting the disease-free survival of patients.
DOI: 10.6084/m9.figshare.22615591.v1
title: Additional file 17 of Dynamics of rice microbiomes reveal core vertically transmitted seed endophytes

description: Additional file 17: Supplementary Table 8. Genomic characteristics of Pantoea and Xanthomonas isolates.
DOI: 10.6084/m9.figshare.19470380.v1
title: Additional file 5 of Comparative transcriptome analysis reveals significant differences in gene expression between pathogens of apple Glomerella leaf spot and apple bitter rot

description: Additional file 5: Table S6. Gene ontology enrichment of the DEGs of the Colletotrichum C. gloeosporioides isolates FL180903 and FL180906.
DOI: 10.6084/m9.figshare.22616275.v1
title: Additional file 2 of Comparative analysis of the chrysanthemum transcriptome with DNA methylation inhibitors treatment and silencing MET1 lines

description: Additional file 2: Supplementary Table 1. Primers for PCR analysis. Supplementary Table 2. Database annotation statistics table. Supplementary Table 3. Top 30 differential pathways between 5 different groups. Supplementary Table 4. Top 10 differential pathways and detail between 5 different groups.
DOI: 10.6084/m9.figshare.22616275
title: Additional file 2 of Comparative analysis of the chrysanthemum transcriptome with DNA methylation inhibitors treatment and silencing MET1 lines

description: Additional file 2: Supplementary Table 1. Primers for PCR analysis. Supplementary Table 2. Database annotation statistics table. Supplementary Table 3. Top 30 differential pathways between 5 different groups. Supplementary Table 4. Top 10 differential pathways and detail between 5 different groups.
DOI: 10.6084/m9.figshare.22615046.v1
title: Additional file 1 of Predicting the risk of acute kidney injury after cardiopulmonary bypass: development and assessment of a new predictive nomogram

description: Additional file 1.
DOI: 10.17632/xkk4mx3vdg.1
title: Data from: Improving natural gas demand forecasts: An approach combining bootstrap aggregation, time series methods and regularization techniques

description: Original data: monthly gross inland natural gas consumption (in Terajoules, TJ) in each of the 14 countries included in the analysis. The data were collected from the Statistical Office of the European Union (EUROSTAT, 2019) database. The time period of the analysis spans from January 2008 to June 2018 (the last date available for all European countries). Data ranging from January 2008 to June 2017 were considered as training set for models using the traditional aggregation routines (mean and median). For models employing the regularization routines, a validation set is included between the months of July 2016 and June 2017, in which appropriate weights are assigned to each of the bagged forecasts. The test set, in turn, comprised the last 12 observations (July 2017 – June 2018). The original data can also be found in the supplementary material of the submitted manuscript (Appendix C). A total of 14 countries were selected for the empirical analysis. An endeavor was made to include most of the major consuming countries in Europe, namely France, Germany, Italy, Netherlands, Turkey and United Kingdom. To demonstrate the flexibility of the proposed approaches, we also selected several medium (Belgium, Poland and Romania) and minor consuming countries (Denmark, Finland, Ireland, Luxembourg and Slovakia). We finally emphasize that not every country could be included in the analysis, due to the lack of data (missing information and/or dataset starting after January 2008). References: EUROSTAT (European Statistics) [dataset]. January 7, 2019 Supply of gas - monthly data [nrg_103m] / UNIT: Terajoules (gross calorific value = GCV) / PRODUCT: Natural gas / INDIC_NRG: Gross inland consumption. 2019 Jan 7 [cited 2019 Jan 7]. Available from: https://ec.europa.eu/eurostat/web/energy/data/database
DOI: 10.5281/zenodo.2582963
title: Greek Airports (ICCS)

description: Visualizes all the Airports in Greece
DOI: 10.5281/zenodo.2582964
title: Greek Airports (ICCS)

description: Visualizes all the Airports in Greece
DOI: 10.5281/zenodo.2582980
title: Athens Greece Places (ICCS)

description: Gathers data describing describing the heritage of the managed or exploited objects on public domain.
DOI: 10.17632/dt7fzs4ry3.1
title: Raw experimental data from Gas Hydrate Autoclave

description: Raw experimental data from Gas Hydrate Autoclave
DOI: 10.17632/f288f6vk84.3
title: Comparative In-Vitro Analysis on Anti-Diabetic Potential of Most prevalent medicinal herbs

description: 18 samples (including seed and pulp of cumini syzygium) were taken on the basis of the prevalent medicinal herbs Inhibition of α-amylase activity Starch solution (0.5%w/v) was prepared by stirring potato starch (0.125 g) in 20 mM sodium phosphate buffer with 6.7 mM sodium chloride (pH 6.9; 25 mL) in a boiling water bath for 15 min. The 𝛼-amylase solution was prepared by mixing 1 U/mL of amylase in the same buffer. The colorimetric reagent was prepared by mixing equal volume of sodium potassium tartrate tetrahydrate solution and 96 mM 3, 5-dinitro salicylic acid (DNS) solution. Starch solution (1000𝜇L) was mixed with increasing concentration of an enzyme inhibitor i.e sample (100, 200, 400, 800, 1000𝜇g/mL) or acarbose (100–1000𝜇g/mL), and to this 1000𝜇L of 𝛼-amylase solution was added and incubated at 25∘C for 3min to react with the starch solution. A 1000𝜇L of 96 mM DNS reagent was added to the above solution, and the contents were heated for 15 min on a boiling water bath. The final volume was made up with distilled water, and the absorbance was measured at 540 nm using spectrophotometer (A. Kuppusamy et.al; 2011). The percentage inhibition and 50% inhibitory concentration (IC50) value was calculated. Inhibition of α-glucosidase activity The 𝛼-glucosidase enzyme inhibition activity was determined by incubating 100𝜇L of 𝛼glucosidase enzyme (1 U/mL) solution with 100𝜇L of phosphate buffer (pH 7.0) which contains 100𝜇L of enzyme inhibitor such a sample (100-1000µg/ml) or acarbose (1001000𝜇g/mL) at 37∘C for 60min in maltose solution. To stop the 𝛼-glucosidase action on maltose, the above reaction mixture was kept in boiling water for 2 min and cooled. To this, 2 mL of glucose reagent was added and its absorbance was measured at 540 nm to estimate the amount of liberated glucose by the action of 𝛼-glucosidase enzyme (Srinivasan and Ramaroa; 2007) .The percentage inhibition and 50% inhibitory concentration (IC50) value was calculated. Percentage inhibition was calculated using following equation: Percentage inhibition=(absorbance of control - absorbance of sample)/(absorbance of control)*100% Percentage inhibition is then transformed in the form of IC50 value using software prism 5. Those samples with IC50 value near to that of standard i.e. Acarbose were considered the best among the samples used. They showed highest inhibition potential in both the cases.
DOI: 10.17632/f7jdpkdnxr.1
title: Measuring and modeling speech intelligibility in real and loudspeaker-based virtual sound environments [dataset]

description: This datafile contains the results from the speech intelligibility experiment collected as part of the publication with the same name as this dataset. The manuscript has the following doi: 10.1016/j.heares.2019.02.003. The speech reception threshold (SRT) is shown as the target to masker ratio (TMR) in dB. It is referred to the written publication for more details on the conditions.
DOI: 10.17632/yrpjzfmzpz.2
title: Dissociation between objective and subjective perceptual experience in a population of hemianopic patients: A new form of blindsight?

description: To investigate the nature of the perceptual experience in the blind visual field, we submitted a group of HH patients to visual letter-detection and letter-identification tasks and assessed them by the Sensation Awareness Scale (Garric & al., 2019).
DOI: 10.5281/zenodo.2582975
title: Dataset of Middle Dutch lexical stress patterns and syllabifications

description: This dataset consists of <strong>48.219 Middle Dutch words</strong> taken from in total 205 rhymed texts of the <em>Cd-rom Middelnederlands </em>(1998). All of these words have been <strong>assigned a syllabification and lexical stress pattern</strong>.

E.g.: <em>proevede</em> is syllabified as <em>proe-ve-de</em> and has a stress index set at -3, which means that – counting from the rightmost syllable – the third syllable receives stress.

This upload contains the following files:


	The <strong>JSON-file</strong> (compressed), which was used as input data for a machine learning algorithm trained for the automatic syllabification and stress assignment of Middle Dutch polysyllabic words (for the code of this experiment, see GitHub)
	An <strong>Excel-file</strong>, containing the same data as the JSON (for more convenient reference)
	A <strong>split file </strong>(compressed), used in the training proces of the above-mentioned experiment
	A pdf-file with some <strong>insightful illustrations</strong> about the contents of the dataset


This dataset is part of the research of Wouter Haverals (FWO, University of Antwerp), carried out under the supervision of prof. Mike Kestemont and em. prof. Frank Willaert.
description: {"references": ["Cd-rom Middelnederlands (Sdu, 1998)"]}
DOI: 10.5281/zenodo.2582976
title: Dataset of Middle Dutch lexical stress patterns and syllabifications

description: This dataset consists of <strong>48.219 Middle Dutch words</strong> taken from in total 205 rhymed texts of the <em>Cd-rom Middelnederlands </em>(1998). All of these words have been <strong>assigned a syllabification and lexical stress pattern</strong>.

E.g.: <em>proevede</em> is syllabified as <em>proe-ve-de</em> and has a stress index set at -3, which means that – counting from the rightmost syllable – the third syllable receives stress.

This upload contains the following files:


	The <strong>JSON-file</strong> (compressed), which was used as input data for a machine learning algorithm trained for the automatic syllabification and stress assignment of Middle Dutch polysyllabic words (for the code of this experiment, see GitHub)
	An <strong>Excel-file</strong>, containing the same data as the JSON (for more convenient reference)
	A <strong>split file </strong>(compressed), used in the training proces of the above-mentioned experiment
	A pdf-file with some <strong>insightful illustrations</strong> about the contents of the dataset


This dataset is part of the research of Wouter Haverals (FWO, University of Antwerp), carried out under the supervision of prof. Mike Kestemont and em. prof. Frank Willaert.
description: {"references": ["Cd-rom Middelnederlands (Sdu, 1998)"]}
DOI: 10.5281/zenodo.2582983
title: Hydrographic Network in Greece (ICCS)

description: Gathers data describing the elements serving on hydrographical network, continental or maritime. Coastlines are considered as maritime standards
DOI: 10.5281/zenodo.2582984
title: Hydrographic Network in Greece (ICCS)

description: Gathers data describing the elements serving on hydrographical network, continental or maritime. Coastlines are considered as maritime standards
DOI: 10.17632/2gkpwpg44j.3
title: Data for: Alignment of f0 peak in different pitch accent types affects perception of metrical stress

description: The paper related to this dataset investigates how stress perception in German is affected by different pitch accent types (with different f0 alignments). Experiment 1 showed more errors in stress identification when f0 peaks and stressed syllables were not aligned – despite phonological association of pitch accent and stressed syllable. Erroneous responses revealed a response bias towards the syllable with the f0 peak. In a visual-world eye-tracking study (Experiment 2), listeners fixated a stress competitor with initial stress more when the spoken target, which had penultimate stress, was realized with an early-peak accent (f0 peak preceding stressed syllable), compared to a condition with the f0 peak on the stressed syllable. Hence, high-pitched unstressed syllables are temporarily interpreted as stressed – a process directly affecting lexical activation. To investigate whether this stress competitor activation is guided by the frequent co-occurrence of high f0 and lexical stress, Experiment 3 increased the frequency of low-pitched stressed syllables in the immediate input. The effect of intonation on competitor fixations disappeared. The paper discusses these findings with respect to a frequency-based mechanism and their implications for the nature of f0 processing. On this platform, stimuli (wav-files) for all experiments are provided, along with datasets (raw data for stress judgements, Experiment 1, and eye-tracking experiments (Experiments 2 and 3)) and a R-Markdown file showing all steps in the statistical analysis (Exp. 1-3). Reference: Zahner, Kutscheid & Braun (in press). Alignment of f0 peak in different pitch accent types affects perception of metrical stress. Journal of Phonetics.
DOI: 10.5281/zenodo.2583082
title: Counts and design files - RNA-Seq workshop (2019-03-07)

description: Counts (generated through usage of featureCounts on the BAM alignment files).

Design file that gives the samples to experimental condition relationship.
DOI: 10.5281/zenodo.2583083
title: Counts and design files - RNA-Seq workshop (2019-03-07)

description: Counts (generated through usage of featureCounts on the BAM alignment files).

Design file that gives the samples to experimental condition relationship.
DOI: 10.5525/gla.researchdata.734
title: Second Harmonic Generation in AlGaAs-On-Insulator Waveguides
DOI: 10.15482/usda.adc/1503442
title: Data from: Starch and dextrose at 2 levels of rumen-degradable protein in iso-nitrogenous diets: Effects on lactation performance, ruminal measurements, methane emission, digestibility, and nitrogen balance of dairy cows.
DOI: 10.5061/dryad.1hg2n56/1
title: Phillips_etal_EcoEvol_SurveyDataFinal

description: Ship, aerial, and telemetry survey data
DOI: 10.6073/pasta/a7d0fc3e7b1b9209ef1573ccbcb1dbb2
title: Dynamics of wood recruitment in streams of the northeastern US

description: A space-for-time analysis was used to quantify large wood loading to
  28 streams in the northeastern US with a range of in-stream and
  riparian forest characteristics in order to better inform stream
  restoration and stream management efforts. We documented the current
  volume and frequency of occurrence of large wood in streams with
  riparian forests varying in their stage of stand development as well
  as stream size and gradient. This data set includes wood, stream and
  riparian forest metrics collected between 2003 and 2007. Linear models
  relating stream wood characteristics to stream geomorphic and forest
  characteristics were compared and results can be found in:

      
  Warren, D. R., C. E. Kraft, W. S. Keeton, J. S. Nunery and G. E.
  Likens. 2009. Dynamics of wood recruitment in streams of the
  northeastern US. Forest Ecology and Management 258(5):804-81
  https://doi.org/10.1016/j.foreco.2009.05.020

      
  These data were gathered as part of the Hubbard Brook Ecosystem Study
  (HBES). The HBES is a collaborative effort at the Hubbard Brook
  Experimental Forest, which is operated and maintained by the USDA
  Forest Service, Northern Research Station.
DOI: 10.5281/zenodo.2583246
title: DOI-to-DOI citations of articles '10.12685/027.7-4-2-155', '10.18452/9093' and '10.11588/PB.2012.1.9398'

description: This data set contains the references to publications with a DOI from my publications:


	Baierer, Konstantin ; Zumstein, Philipp (2016): Verbesserung der OCR in digitalen Sammlungen von Bibliotheken. <em>027.7 : Zeitschrift für Bibliothekskultur = Journal for Library Culture</em>, 4(2):72-83. https://doi.org/10.12685/027.7-4-2-155
	Kim, Timotheus Chang-whae ; Zumstein, Philipp (2016): Semiautomatische Katalogisierung und Normdatenverknüpfung mit Zotero im Index Theologicus. <em>LIBREAS. Library ideas,</em> [12]:29 47-56. https://doi.org/10.18452/9093
	Zumstein, Philipp (2012): Die Rolle des Semantic Web für Bibliotheken: Linked Open Data und mehr: Welche Strategien können hier die Bibliotheken in die Zukunft führen? <em>Perspektive Bibliothek ,</em> 1(1):81-102. https://doi.org/10.11588/PB.2012.1.9398
DOI: 10.5281/zenodo.2583247
title: DOI-to-DOI citations of articles '10.12685/027.7-4-2-155', '10.18452/9093' and '10.11588/PB.2012.1.9398'

description: This data set contains the references to publications with a DOI from my publications:


	Baierer, Konstantin ; Zumstein, Philipp (2016): Verbesserung der OCR in digitalen Sammlungen von Bibliotheken. <em>027.7 : Zeitschrift für Bibliothekskultur = Journal for Library Culture</em>, 4(2):72-83. https://doi.org/10.12685/027.7-4-2-155
	Kim, Timotheus Chang-whae ; Zumstein, Philipp (2016): Semiautomatische Katalogisierung und Normdatenverknüpfung mit Zotero im Index Theologicus. <em>LIBREAS. Library ideas,</em> [12]:29 47-56. https://doi.org/10.18452/9093
	Zumstein, Philipp (2012): Die Rolle des Semantic Web für Bibliotheken: Linked Open Data und mehr: Welche Strategien können hier die Bibliotheken in die Zukunft führen? <em>Perspektive Bibliothek ,</em> 1(1):81-102. https://doi.org/10.11588/PB.2012.1.9398
DOI: 10.6073/pasta/e2ee70b71c804d82380b10e47692a913
title: Status and Distribution of Fish in an Acid-impacted Watershed of the Northeastern United States (Hubbard Brook, NH)

description: In this study, we document a fish community shift in the upper
  mainstem of Hubbard Brook (NH) from the presence of at least three
  species in the 1960s to the presence of only one species; Salvelinus
  fontinalis (Brook Trout) is the only fish species now present in the
  upper reaches of the Hubbard Brook Valley. This data set includes the
  upstream extent of Brook Trout, change in distribution from 2005 to
  2007 and presence of potential physical barriers in each Hubbard Brook
  tributary from 2005, 2006, and 2007 fish surveys. For details see
  Warren, D. R., G. E. Likens, D. C. Buso and C. E. Kraft. 2008. Status
  and Distribution of Fish in an Acid-impacted Watershed of the
  Northeastern United States (Hubbard Brook, NH) Northeastern Naturalist
  15(3):375-390. https://doi.org/10.1656/1092-6194-15.3.375

      
  These data were gathered as part of the Hubbard Brook Ecosystem Study
  (HBES). The HBES is a collaborative effort at the Hubbard Brook
  Experimental Forest, which is operated and maintained by the USDA
  Forest Service, Northern Research Station.
DOI: 10.18739/a2pv6b660
title: Plant trait measurements of species at snowfences around Toolik Lake, Alaska, 2010-2011.
DOI: 10.5061/dryad.n3t3f8h/1
title: Number of interaction, removal rate and dispersal distance by ants in Brazilian Caatinga
DOI: 10.25345/c5x32p
title: MassIVE MSV000083524 - Target Expression Profiling Identifies FLT3 as a BiTE Target for Acute Myeloid Leukemia
title: Acute myeloid leukemia (AML) is a grievous illness with unmet medical need. Recently developed targeted therapies have been approved, but only for subsets of patients and the depth and duration of these treatments is not yet established. Bispecific T cell Engaging (BiTE) antibody constructs engage the body's endogenous T cells to target tumor cells. To investigate on target off-disease FLT3 RNA was detected in cerebellum; however, the majority of cerebellar FLT3 transcripts was truncated and cell surface protein was not detected. Mass spectrometry analysis of FLT3 immunoprecipitations from human cerebellum and control cells (EOL-1) did not detect the C-terminal portion of the protein as compared to the control cells. This supports other evidence that a truncated form of FLT3 is expressed in the cerebellum.
DOI: 10.13140/rg.2.2.13491.68644
title: vanillapayoffbridgeparameters
DOI: 10.17632/6m7rcprpgw.1
title: Data for: Nutrients mediate the effects of temperature on methylmercury concentrations in freshwater zooplankton