cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28559978.v3
title: ZHAO30yr: model errors and geographic mask

description: In the internal tide model ZHAO30yr (https://doi.org/10.6084/m9.figshare.28078523.v1), model errors are estimated using background internal tides. Background internal tides are extracted from the same altimetry data following the same procedure but using tidal periods slightly different from the eight principal constituents. In other words, model errors are indicated by internal tide signals where internal tides do not exist. In principle, model errors are determined by the given altimetry data and the mapping technique used to extract internal tides. Background internal tides do not vary much over the narrow semidiurnal or diurnal frequency bands. ZHAO30yr estimates errors in semidiurnal internal tides using 12.3373 hours (M<sub>2</sub> minus 5 minutes) and in diurnal internal tides using 23.8511 hours (K<sub>1</sub> minus 5 minutes). Both mode-1 and mode-2 internal tides are estimated for the semidiurnal and diurnal constituents. A geographic mask is provided. In most of the global ocean, model errors are very low. On a global average, the model errors in all semidiurnal and diurnal constituents are lower than 1 mm. In regions of extremely high mesoscale eddies, the semidiurnal errors are dominantly larger than 1 mm due to mesoscale contamination. These regions include the Kuroshio extension region, the Gulf Stream, the East Australian Current, and so on. These regions are highlighted by black contours.In this folder, there are 4 files for model errors of different baroclinic modes and different frequencies, as indicated by file names (ZHAO30yr-V1-MD1-K1-error, ZHAO30yr-V1-MD2-K1-error, ZHAO30yr-V1-MD1-M2-error, and ZHAO30yr-V1-MD2-M2-error). Each file contains a 5-wave summed 1-degree smoothed SSH amplitude error map and 5 decomposed waves (amplitude, phase, and direction) at each grid point. ZHAO30yr_mask gives the geographic mask for regions fouled by mesoscale contamination.
DOI: 10.6084/m9.figshare.28956629.v1
title: dataset for Molecular characterization of organic aerosol.xlsx

description: This is the dataset for <b>Molecular characterization of organic aerosol</b><b> between</b><b> </b><b>urban</b><b> and seaside environments u</b><b>s</b><b>ing offline FIGAERO-</b><b>I-</b><b>CIMS</b>.
DOI: 10.6084/m9.figshare.5667760.v1
title: Cerebellar abiotrophy in a feline: case report

description: ABSTRACT The aim of this report was to describe a case of cerebellar abiotrophy in cat with 45-year-old diagnosed at the Animal Pathology Laboratory, Veterinary Hospital of the Federal University of Campina Grande. The animal had presented 15-day apathy, anorexia, dehydration and neurological signs, characterized by ataxia, hypermetria, spasticity of fore and hindlimbs, intention tremor, nystagmus, opisthotonos, proprioceptive deficits, and absence of threat response. Clinically, cerebellar hypoplasia was suspected and the animal was euthanized due to poor prognosis. During necropsy, gross lesions were not observed. Microscopically the lesions were restricted to the cerebellum and were characterized by neurodegenerative and necrotic damage with segmental disappearance of the Purkinje cells. In these areas, there were also empty spaces, called the empty basket aspect, resulting from the loss of Purkinje cells, as well as rare axonal spheroids and proliferation of Bergmann's astrocytes. In some areas, the granular layer was hypocellular and there was moderate multifocal gliosis in the molecular layer. The diagnosis of cerebellar abiotrophy was based on epidemiological, clinical and mainly on histopathological changes in neurons of Purkinje disease characteristics.
DOI: 10.6084/m9.figshare.19838083.v2
title: Dataset

description: Infectious keratitis is a group of corneal disorders in which corneal tissues suffer inflammation and damage caused by pathogenic infections. Among these, Fungal Keratitis (FK) and Acanthamoeba Keratitis (AK) are some of the most severe, with a high chance of permanent blindness if they are not diagnosed early and accurately. In Vivo Confocal Microscopy (IVCM) allows the imaging of different layers of the cornea, providing an important tool for an early and more accurate diagnosis. In this paper, we introduce the IVCM-Keratitis dataset consisting of a total of 4001 sample images of AK and FK, as well as Non-Specific Keratitis (NSK) and healthy corneas classes. We also use this dataset to develop multiple deep-learning models based on Convolutional Neural Networks (CNNs) for the automated diagnosis of infectious keratitis. Among these models, Densenet161, had the best performance with accuracy, precision, recall, and F1 score of 93.55%, 92.52%, 94.77%, and 96.93%, respectively. These results demonstrate the potential of deep learning-based models in early and automated diagnosis of AK and FK. We further showed that these models can be used to highlight the areas of infection in the IVCM images and explain the reason behind their diagnosis by utilizing saliency maps as a technique used in eXplainable Artificial Intelligence (XAI) to interpret these models.
DOI: 10.6084/m9.figshare.25599819.v1
title: Prokaryotic_Pfams.zip

description: This zipped csv file contains all Pfam instances annotated using Interproscan in a set of prokaryotic genomes.Table contains genome accesion, Pfam ID, Uniprot ID, Pfam sequence
DOI: 10.6084/m9.figshare.5101144.v4
title: Fagus sylvatica chorology

description: Distribution map of European beech (<i>Fagus sylvatica</i>)<br><br>These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geo-databases, scientific and grey literature.<br>The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix "plg"), which define continuous areas of occupancy of the species, and with point features (name suffix "pnt"), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix "syn"). <br>Polygon borders delimiting species ranges are generalized across the mainland and sea boundaries. This offers the possibility to mask sea areas or to clip and extract the terrestrial range parts using GIS data layers of the users' choice. An additional version of polygon ranges are clipped with a coastline (name suffix "clip"), which have been derived from Natural Earth dataset "Admin 0 - Countries" 1:50M version 4.1.0 (https://www.naturalearthdata.com). <br><br>Please cite as:<br>Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007 <br><br>Additional information and used references are on 'supplementary materials' document:<br>https://doi.org/10.6084/m9.figshare.5091901<br><br>Chorological maps are part of the "European Atlas of Forest Tree Species" project:<br>https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.17632/8d54v74fst
title: Soil heavy metals in the northern foothills of Qinling Mountain, China

description: Soil heavy metal concentration across diverse land-use types within the northern foothills of Qinling Mountain, China
DOI: 10.17632/wngs282m48
title: Mitigating curtailment and carbon emissions through data center load migration. Zheng et al

description: This dataset include all the data, codes and figures for the paper Zheng et al - Mitigating curtailment and carbon emissions through data center load migration, Joule (2020), https://doi.org/10.1016/j.joule.2020.08.001. Please cite the paper if you use this dataset. A READ_ME.txt is available in the folder listing the name and description of each file. - "Data" folder includes the hourly generation & hourly life cycle GHG intensities of CAISO and PJM and hourly curtailment of CAISO during 2015/2016-2019. Other data for calculation and the results for Fig. 4 are also included in this folder. - "Codes" folder include all the R codes used for data collection, data cleaning and plots generation for Fig. 1-4. - "Figures" folder include Figure 1-4 in the main text. For any additional inquiries regarding this dataset, please contact jzheng@bren.ucsb.edu or suh@bren.ucsb.edu.
DOI: 10.6084/m9.figshare.1593020.v1
title: Political Speech

description: The most 3200 recent Tweets (obtained 4 Nov, 2015) of the following Twitter accounts: "PPopular", "PSOE", "socialistes_cat", "iunida", "ANOVA_irmandade", "ahorapodemos", "UPYD", "UPyDEuropa", "epp", "PES_PSE", "aldeparty", "europeangreens", "AllianceECR", "europeanleft", "PDE_EDP", "EUPARTYEFA", "AEMN_eu", "ECPM_official", "CiudadanosCs", "EuroPrimaveraIB", "vox_es"
DOI: 10.6084/m9.figshare.21625079.v1
title: Global Integrated and Homogenized Solar surface Radiation Datasets

description: The globally integrated and homogenized solar surface radiation dataset includes the homogenized SSR dataset (SSRIH<sub>grid</sub>) and the AI-reconstructed SSR dataset (SSRIH<sub>20CR</sub>). SSRIH<sub>grid</sub> is a 5°×5° homogenized global monthly SSR anomalies dataset. SSRIH<sub>20CR</sub> is a 5°×2.5° full-coverage monthly land (except for Antarctica) SSR anomalies reconstructed dataset based on the 20CRv3 AI model.
DOI: 10.17632/xd698v9w9s
title: Antioxidant metabolism dataset of Halophytes

description: The dataset was collected to analyze the antioxidant system of two non-model halophytes - Dichanthium annulatum (moderately salt tolerant) and Urochondra setulosa (extremely salt tolerant) at different salinity level
DOI: 10.6084/m9.figshare.12192630.v2
title: A Dietary Fatty Acid Counteracts Neuronal Mechanical Sensitization

description: Source data file of main and supplementary figures.
DOI: 10.6084/m9.figshare.23508882.v1
title: 05 Nwestbladi. Annotated proteins. Amino acids. HiFi genome

description: Gene models (in amino acids) annotated in the genome of Nemertoderma westbladi sequenced with HiFi
DOI: 10.17632/26fkz72d62
title: Chemical structure of drugs

description: .pdf files of the chemical structures of drugs
DOI: 10.17632/fbh6mpmnhc
title: Data for GCA

description: The experimental data.
DOI: 10.17632/x85xwjky6n
title: Estrés y carga laboral del personal de enfermería en Ecuador durante el Covid-19

description: La población investigada fue de 240 profesionales de enfermería que brindaron cuidados y atención, a pacientes contagiados por coronavirus, en las unidades de Cuidados Intensivos (UCI), Medicina Interna y Emergencia, quienes aceptaron voluntariamente participar, de acuerdo con los criterios de inclusión y exclusión determinados en la investigación, mediante el respectivo consentimiento informado. 
Para el procesamiento de datos se utilizaron herramientas de recolección en línea (QuestionPro y Jotform), que permiten definir las características sociodemográficos;  los niveles de carga laboral y estrés se determinaron aplicando la escala  de carga de trabajo en enfermería (NAS del inglés: Nursing Activity Score) y la escala de estresores en enfermería  (NSS del inglés: Nursing Stress Scale), consideradas, actualmente como las  más importantes para evaluar el nivel de carga de trabajo en el profesional de enfermería que labora en la asistencia y las actividades realizadas en el cuidado del paciente
DOI: 10.6084/m9.figshare.1476982.v2
title: Manually labeled tracts (right)

description: Manually labeled tracts for right hemispheres of 12 subjects
DOI: 10.6084/m9.figshare.20475090.v1
title: Code for phylogenetic tree

description: Code for the design assembly of the phylogenetic tree in .txt and .nwk files.
DOI: 10.6084/m9.figshare.25539883.v2
title: CASTom-iGEx workflow example

description: CASTom-iGEx example workflowThis example provides simulated genetic data, one reference PriLer model and a typical workflow bash script covering the following steps:1. Imputation of gene expression from genotype data using a reference PriLer model2. Calculation of T-scores and pathway scores based on GO and Reactome databases3. Association testing between scores and a simulated diagnosis<br>The CASTom-iGEx toolkit can be downloaded from https://github.com/zillerlab/CASTom-iGEx. This example provides a model for Brain Cortex trained on GTEx data. The rest of the models for other tissues can be downloaded from https://figshare.com/articles/dataset/Trained_PriLer_models_on_European_ancestry_individuals/22347574/.<br>Before executing the example script castom_example.sh, open it and add path to the main CASTom-iGEx directory.
DOI: 10.6084/m9.figshare.27015031.v1
title: Plant-nematode.xlsx

description: Aboveground and belowground attributes of terrestrial ecosystems interact to shape carbon (C) cycling. However, plants and soil organisms are usually studied separately, leading to a knowledge gap regarding their coordinated contributions to ecosystem C cycling.We explored whether integrated consideration of plant and nematode traits better explained soil organic C (SOC) dynamics than plant or nematode traits considered separately. Our study system was a space-for-time natural restoration chronosequence following agricultural abandonment in a subtropical region, with pioneer, early, mid and climax stages. We identified an integrated fast-slow trait spectrum encompassing plants and nematodes, demonstrating coordinated shifts from fast strategies in the pioneer stage to slow strategies in the climax stage, corresponding to enhanced SOC dynamics. Joint consideration of plant and nematode traits explained more variation in SOC than by either group alone. Structural equation modeling revealed that the integrated fast-slow trait spectrum influenced SOC through its regulation of microbial traits, including microbial C use efficiency and microbial biomass. Our findings confirm the pivotal role of plant-nematode trait coordination in modulating ecosystem C cycling and highlight the value of incorporating belowground traits into biogeochemical cycling under global change scenarios.
DOI: 10.6084/m9.figshare.29132210.v1
title: Data from Kaczmarek et al. 2025 - A ducted, biomimetic nipple replicates breastfeeding mechanics through ontogeny in an infant animal model

description: Data for statistical analyses.
DOI: 10.15468/dl.jj85rf
title: Occurrence Download

description: A dataset containing 330749 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Holcus mollis L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 330749 records from 1324 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013092-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15482/usda.adc/1461491
title: Blattella germanica Official Gene Set OGSv1.0
DOI: 10.17632/dd9jv5pw3n
title: Bisnis Incubator Bandung

description: Provide Bisnis Incubator Bandung
DOI: 10.6084/m9.figshare.13010039.v1
title: RNA mass spectrometry on WT, Tet2 KO, and Tet1/2/3 tKO mouse embryonic stem cells

description: Mass spectrometry for total, size selected small RNAs (&lt; 200 nts), and gel-purified tRNAs in wild type, Tet2 single KO, and Tet1/2/3 triple KO mouse embryonic stem cells. As shown in Fig. 4A–B and Extended Data Fig. 4D of "<i>TET2 chemically modifies tRNAs and regulates tRNA fragment levels</i>" by He et al.
DOI: 10.6084/m9.figshare.14931222.v1
title: Supplementary Material for: A Taxonomy for Psycho-Oncological Intervention Techniques in an Acute Care Hospital in Germany

description: <b><i>Background:</i></b> Due to the establishment of a nationwide certification system for cancer centers in Germany, the availability of psycho-oncological services for cancer patients has increased substantially. However, little is known about the specific intervention techniques that are applied during sessions in an acute care hospital, since a standardized taxonomy is lacking. With this study, we aimed at the investigation of psycho-oncological intervention techniques and the development of a comprehensive and structured taxonomy thereof. <b><i>Methods:</i></b> In a stepwise procedure, a team of psycho-oncologists generated a data pool of interventions and definitions that were tested in clinical practice during a pilot phase. After an adaptation of intervention techniques, interrater reliability (IRR) was attained by rating 10 previously recorded psycho-oncological sessions. A classification of interventions into superordinate categories was performed, supported by cluster analysis. <b><i>Results:</i></b> Between April and June 2017, 980 psycho-oncological sessions took place. The experts agreed on a total number of 22 intervention techniques. An IRR of 89% for 2 independent psycho-oncological raters was reached. The 22 techniques were classified into 5 superordinate categories. <b><i>Discussion/Conclusion:</i></b> We developed a comprehensive and structured taxonomy of psycho-oncological intervention techniques in an acute care hospital that provides a standardized basis for systematic research and applied care. We expect our work to be continuously subjected to further development: future research should evaluate and expand our taxonomy to other contexts and care settings.
DOI: 10.6084/m9.figshare.24710166.v7
title: MPDSR-Bangladesh data

description: Maternal and perinatal death surveillance and response in Bangladesh: A case study on measuring impact through health information systems<br>
DOI: 10.6084/m9.figshare.25404136.v1
title: Codes and data set for the paper entitled "Disaster Vulnerability in Road Networks: A Data-Driven Approach through Analyzing Network Topology and Movement Activity".

description: This research aims to assess the road network vulnerability using the network topology and movement activity data.
DOI: 10.6084/m9.figshare.29163815.v1
title: Data linked to the manuscript 'Bio-geomorphologic effects on blue carbon accumulation in mangrove sediments'

description: This dataset combines the data used to generate figures in the manuscript 'Bio-geomorphologic effects on blue carbon accumulation in mangrove sediments'.
DOI: 10.6084/m9.figshare.8940389.v1
title: Gff3 file of high-confidence genes without alternatively splicing in Isatis indigotica

description: Gff3 file of high-confidence genes without alternatively splicing in Isatis indigotica
DOI: 10.17632/z34fks5sr2
title: Functional annotation of a candidate Ascochyta blight resistance region in chickpea.

description: Ascochyta blight is one of the most devastating diseases in chickpea, causing huge yield losses if the conditions are optimal for the development of the fungal pathogen. Two recombinant inbred line (RIL) populations segregating for Ascochyta blight resistance were developed. RIP8 came from the cross between ILC3279 (resistant) x WR315 (susceptible), while RIP10 was derived from the cross JG62 (susceptible) x ILC72 (resistant). Both populations were sequenced and aligned to the reference genome in NCBI (ASM33114v1) for the obtention of single nucleotide polymorphisms (SNPs). A direct marker-trait association revealed a region in chromosome 4 (3.52-8.20 Mb) which was associated with Ascochyta blight resistance in both populations. The dataset presented shows the functional annotation of all the genes located within this region in all the GO categories (Biological Process, Cellular Component, Molecular Function). The annotation of the region revealed 30 candidate genes for resistance which have to be further studied , and furthermore, one candidate gene with a SNP within its sequence. The dataset has five columns: Column number 1 provides the sequence ID in NCBI; Column 2 specifies the number of GO terms that were assigned to the sequence; Column 3 shows the GO ID assigned to the sequence; Column 4 gives further information about the function of the gene; and Column 5 groups the assigned GO terms in the three GO categories listed above. These data can be used if a gene within this region is associated with another agronomic trait of interest, or to further analyse the function of the annotated genes
DOI: 10.6084/m9.figshare.21206990.v4
title: epoch data after pre-processing

description: The epoch data are a fieldtrip format structure, all epochs (ended with 'WrdOn') are aligned with fixation onset to a given word (as time 0), with a length of one second ([-0.5 0.5]s). Epochs were named as the combination of the acquisition date, subject code, and data type. Epochs that ended with 'BL_Cross' were the baseline period before the presentation of the sentences. This filed 'trialinfo' is the information about each trial, the header of all columns is as followings: 1- sentence_id: sentence number for this epoch 2- word_loc: the location of the current word in a sentence 3- loc2targ:location distance between the current word and target word; loc2targ for pre-target, target, post-target are -1, 0, and 1 4- saccade2this_duration: saccade duration toward this word 5- fixation_on_MEG: MEG trigger for fixation onset to this word 6- fixation_duration 7- NextOrder: next word location minus the current word location; negative value indicates saccade backward to the previous words 8- FirstPassFix: whether this fixation is the first for this word or not 9- PreviousOrder: previous word location minus the current word location; negative value indicates saccade forward to the next words 10- SentenceCondition: the current word is in a sentence with incongruent or congruent target word; 11 -- incongruent, 2 -- congruent 11- PupilSize: averaged pupil size during this fixation
DOI: 10.6084/m9.figshare.24771183.v2
title: Genome data of the tropical sea cucumber Holothuria scabra.

description: <b>Chromosomal-level genome assembly and annotation of the tropical sea cucumber </b><b><i>Holothuria scabra.</i></b>
DOI: 10.17632/6x4y9x9cpc
title: Data

description: Original data
DOI: 10.6084/m9.figshare.24190272.v1
title: Supply CSV from Bitcoin mempool

description: CSV extracted from a local Bitcoin node, transactions in the mempool, created blocks
DOI: 10.6084/m9.figshare.28212509.v1
title: paper

description: geochemical and isotopic dataset
DOI: 10.6084/m9.figshare.29099816.v1
title: 2025_SBES_GDSWEB

description: Ensinar Engenharia de Software (SE) não é fácil. Envolve malabarismos com várias disciplinas, abstrações técnicas e fatores humanos. Os alunos precisam aprender sobre processos, ferramentas, métodos e melhores práticas - tudo, desde a coleta de requisitos até a manutenção de sistemas - enquanto conectam a teoria à prática do mundo real. No entanto, aqui está o problema: muitos educadores lutam para manter os alunos motivados e engajados. As palestras tradicionais geralmente parecem muito teóricas e desconectadas das aplicações da vida real. Para resolver esse problema, este artigo apresenta o GDS Web, uma ferramenta online projetada para ajudar os professores a criar aulas gamificadas construídas em torno da narrativa. A plataforma segue o processo Game Design Storytelling (GDS) e usa automaticamente IA generativa para construir narrativas educacionais. Realizamos um estudo com estudantes de graduação em ciência da computação para testar a ferramenta. Depois de uma aula sobre teoria da gamificação, eles projetaram uma aula gamificada usando GDS Web. Eles podem se concentrar em programação, conceitos básicos de computação ou qualquer tópico relacionado à Engenharia de Software. Reunimos seus comentários por meio de um grupo focal. Os resultados mostraram que a ferramenta ajuda os usuários, mesmo aqueles com pouca experiência em gamificação, a construir planos de aula envolventes. Ele também revelou algumas áreas de melhoria, como clareza da interface e recursos de personalização. <br>