cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26633964.v1
title: Additional file 12 of Landscape of enhancer disruption and functional screen in melanoma cells

description: Additional file 12: Table S11. Melanoma cell lines genetic profile in enhancer regions.
DOI: 10.6084/m9.figshare.26633946.v1
title: Additional file 6 of Landscape of enhancer disruption and functional screen in melanoma cells

description: Additional file 6: Table S5. Information of sgRNAs and associated enhancers.
DOI: 10.6084/m9.figshare.26632944.v1
title: Additional file 7 of Multiplex CRISPR-Cas9 knockout of EIL3, EIL4, and EIN2L advances soybean flowering time and pod set

description: Additional file 7: Table S5. KEGG enrichment analysis of differentially expressed genes.
DOI: 10.6084/m9.figshare.26632947.v1
title: Additional file 8 of Multiplex CRISPR-Cas9 knockout of EIL3, EIL4, and EIN2L advances soybean flowering time and pod set

description: Additional file 8: Table S6. FPKM value of all expressed genes.
DOI: 10.6084/m9.figshare.26761843.v1
title: earlgrey_Z.indianus_4605_repatmasker.filter.bb

description: Zaprionus Indianus 4605
DOI: 10.15468/dl.4jj6g6
title: Occurrence Download

description: A dataset containing 785 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thorius spilogaster Hanken & Wake, 1998"
 ]
}

 The dataset includes 785 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070520-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.utw72b
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.147168 -34.199559, 148.147168 -34.201805, 148.149413 -34.201805, 148.149413 -34.199559, 148.147168 -34.199559))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070522-240626123714530/datasets/export for details.
DOI: 10.15468/dl.64nbtu
title: Occurrence Download

description: A dataset containing 18434 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is one of (USA.10.49_1)",
 "CoordinateUncertaintyInMeters is less than or equal to 200"
 ]
}

 The dataset includes 18434 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070521-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26632950
title: Additional file 9 of Multiplex CRISPR-Cas9 knockout of EIL3, EIL4, and EIN2L advances soybean flowering time and pod set

description: Additional file 9: Table S7. Target sequence and SNP genotyping by multiplex amplicon sequencing.
DOI: 10.15468/dl.w5u3gj
title: Occurrence Download

description: A dataset containing 14 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-97.87188 22.65548,-99.17464 22.22275,-99.17464 21.54276,-99.23571 20.53585,-99.03215 18.56019,-98.52326 17.68965,-98.21793 16.93174,-97.42406 16.73691,-96.22308 16.50285,-94.4725 16.46381,-92.80334 16.81487,-91.96876 17.30137,-91.84662 18.65665,-97.87188 22.65548))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Amauropelta deflexa (C.Presl) Á.Löve & D.Löve"
 ]
}

 The dataset includes 14 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070524-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8mryk5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.254966 -34.199559, 148.254966 -34.201805, 148.259458 -34.201805, 148.259458 -34.206297, 148.261703 -34.206297, 148.261703 -34.199559, 148.254966 -34.199559))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070525-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26633238
title: Additional file 2 of Spatiotemporal evolution of AML immune microenvironment remodeling and RNF149-driven drug resistance through single-cell multidimensional analysis

description: Additional file 2. Analysis of predicted drug sensitivity to various drugs in each patient.
DOI: 10.6084/m9.figshare.24452447
title: Additional file 1 of Genetic polymorphism of Y-chromosome in Kazakh populations from Southern Kazakhstan

description: Additional file 1: Table S1. The haplogroup and haplotype distributions of 27 Y-chromosomal STRs in Kazakh population from Southern Kazakhstan (N=468).
DOI: 10.1594/ieda/324166
title: Processed Navigation Data from the Antarctic Peninsula acquired during R/V Laurence M. Gould expedition LMG1701 (2016)

description: This data set was acquired with a Navigation System during R/V Laurence M. Gould expedition LMG1701 conducted in 2016 (Chief Scientist: Dr. Hugh Ducklow, Investigator: Dr. Hugh Ducklow). These data files are of Text File (ASCII) format and include Navigation data that were processed after acquisition. Funding was provided by NSF award(s): PLR14-40435.
DOI: 10.1594/ieda/324172
title: Processed Underway Hydrographic and Weather and Ship-state Data (JGOFS) from the Antarctic Peninsula acquired during R/V Laurence M. Gould expedition LMG1702 (2017)

description: This data set was acquired with a  Meteorological Sensor, Echosounder, Thermosalinograph, Navigation System and  Flourometer during R/V Laurence M. Gould expedition LMG1702 conducted in 2017 (Chief Scientist: Dr. Josh Kohut, Investigator: Dr. Josh Kohut). These data files are of JGOFS (ASCII) format and include Bathymetry, Conductivity, Fluorescence, Infrared Radiation, Meteorological, Navigation, Salinity, Temperature and Visible Radiation data that were processed after acquisitionThis data set was created from calibrated data decimated at 1-minute intervals. Several fields are derived measurements from more than a single raw input. Data were acquired as part of the project(s): Collaborative Research: Fjord Ecosystem Structure and Function on the West Antarctic Peninsula - Hotspots of Productivity and Biodiversity? (FjordEco); Antarctic Peninsula Exhumation and Landscape Development Investigated by Low-Temperature Detrital Thermochronometry; Continuation of the LARISSA Continuous GPS Network in View of Observed Dynamic Response to Antarctic Peninsula Ice Mass Balance and Required Geologic Constraints. Funding was provided by NSF award(s): ANT11-43981, ANT14-43680, ANT15-43256.
DOI: 10.1594/ieda/316633
title: Raw XCTD Expendable Probe Data from the Drake Passage acquired during the Laurence M. Gould expedition LMG1004 (2010)

description: This data set was acquired with a Sippican MK21 XCTD Expendable Probe during Laurence M. Gould expedition LMG1004 conducted in 2010 (Chief Scientist: Dr. William Detrich). These data files are of Sippican MK21 Export Data File format and include Temperature data that have not been processed. Data were acquired as part of the project(s): Protein folding and function at cold temperature: Co-evolution of the chaperonin CCT and tubulins from antarctic fishes, and funding was provided by NSF grant(s): ANT06-35470.
DOI: 10.1594/ieda/324328
title: Hypocenter Catalog Data from the Mid-Atlantic Ridge - Rainbow Vent Field, 2013

description: This data set was acquired with Scripps Institution of Oceanography LC4X4 Ocean Bottom Seismometers deployed during R/V Marcus G. Langseth expedition MGL1305 in 2013 (Chief Scientist: Juan Pablo Canales, Investigators: Robert Sohn, Juan Pablo Canales, Robert Dunn). OBS recovery took place during R/V Pelagia cruise 64PE382 (Chief scientist: Robert Sohn, Investigators: Juan Pablo Canales, Robert Dunn). The earthquake hypocenter catalog is in ASCII text format. The first column is the event origin time. Note that depth is relative to sea level (i.e., -3.0 equals 3 km below sea level). The RMS value is the misfit of the hypocenter location. Only those events with RMS &lt; 0.2 s were published in the Horning et al., 2018 journal article, but all events with at least 6 body wave arrivals across the network and RMS &lt; 0.5 s are listed in this catalog. The data file was generated as part of the project called MARINER: Seismic Investigation of the Rainbow Hydrothermal Field and its Tectono/magmatic Setting, Mid-Atlantic Ridge 36 Degrees 14'N. Funding was provided by NSF award OCE09-61680.
DOI: 10.26022/ieda/329670
title: AUV raw and vehicle-corrected track line navigation and magnetic field data for the HD-YLAKE project, Yellowstone Lake, 2016

description: This data set consists of raw and vehicle corrected trackline navigation and magnetic field measurements collected by an autonomous underwater vehicle (AUV) in Yellowstone Lake in July 2016. The AUV magnetometer was an APS (Applied Physics Systems model 1540) 3-axis fluxgate sensor (https://www.appliedphysics.com/products/magnetometers/) as part of a Self-Compensating Magnetometer (SCM) System supplied by Ocean Floor Geophysics Inc. (OFG: https://www.oceanfloorgeophysics.com). The WHOI REMUS group operated the REMUS 600 AUV. Navigation was provided by a deployed acoustic transponder network. The data files are in ASCII format with the following columns: unix time in seconds, year, month, day, hour, min, sec, longitude, latitude, heading (degrees), depth (meters), altitude (meters), pitch (degrees), roll (degrees), mag1 (nT), mag2 (nT), mag3 (nT), total magnetic field intensity (nT), thrust (amps), fiducial, mag1_corrected (nT), mag2_corrected (nT), mag3_corrected (nT), corrected total magnetic field intensity (nT), uncorrected total magnetic field intensity (nT), total field correction (nT). The file names are formatted with the AUV dive name as the first part of the file name followed by the name of the dive used for the magnetic calibration. In this survey, the magnetic calibration factors for all of the files are based on data from dive YL16A06. The lake surface and AUV magnetic data sets were acquired under National Park Service research permit YELL-2016-SCI-7018. The data set was generated as part of the Hydrothermal Dynamics of Yellowstone Lake (HD-YLAKE) project and was supported by National Science Foundation grant EAR-1516361.
DOI: 10.26022/ieda/329664
title: Lake surface track line navigation and magnetic anomaly data for the HD-YLAKE project, Yellowstone Lake, 2016

description: This data set consists of track line navigation and magnetic field measurements collected on Yellowstone Lake in September 2016. The magnetic sensor was an Overhauser scalar magnetometer (Marine Magnetics Explorer sensor) towed at ~15 m behind the USGS boat Alamar with navigation recorded using a GlobalSat USB GPS receiver with a precision of a few meters. The magnetic data was collected at the lake level, at a mean elevation value of 2358 meters above sea level. The data files are in ASCII format with the following columns: longitude, latitude, x (m), y(m), date(YYYY/MM/DD), utc_time(HH:MM:SS), raw magnetic field intensity (nT), magnetic anomaly (nT). The magnetic anomaly was computed after correcting for diurnal variations and removing the regional IGRF [Thebault et al., 2015]. Diurnal corrections were applied utilizing the Newport (NEW) and Boulder (BOU) geomagnetic observatory records. The data set was generated as part of the Hydrothermal Dynamics of Yellowstone Lake (HD-YLAKE) project and was supported by National Science Foundation grant EAR-1516361, U.S Geological Survey Mineral Resource and Volcano Hazard Programs, and benefited from major in-kind support from the U.S. Geological Survey Yellowstone Volcano Observatory. The lake surface and AUV magnetic data sets were acquired under National Park Service research permit YELL-2016-SCI-7018. Maurice Tivey was supported under NSF IPA grant 1557455 to WHOI. During the course of this study, C. Bouligand was a visiting scientist at the U.S. Geological Survey in Menlo Park, California, USA and benefited from a delegation to Centre National de la Recherche Scientifique (CNRS) and received funding from CNRS-INSU program SYSTER.
DOI: 10.26022/ieda/329763
title: Catalog of impulsive acoustic events identified for the April-May 2015 eruption of Axial Seamount

description: Impulsive acoustic events were identified on station AXEC2 by matching waveforms against a suite of 817 waveform templates chosen from isolated arrivals, with high signal-to-noise, that span the eruptive period. Template matching using three-component (HDH, HHZ, and HHN) waveforms returned a set of &gt;37,000 detections (correlation coefficient &gt;0.7). For each detection on AXEC2, the vertical (HHZ) channel waveform was cross-correlated against the other six OOI stations within the caldera to precisely determine the time of the first (sea surface-reflected) and second (sea surface- and seafloor-reflected) arriving phases across the network. Locations were determined using a grid search with a 25 x 25 m spatial resolution. Travel times for both phases were computed assuming a planar sloping seafloor between the source and each receiver with a constant sound velocity of 1485 m/s. The final catalog contains locations for ~22,000 impulsive sounds constrained using at least 7 arriving phases, with an average root mean square error of 0.022 sec. The mean location uncertainty is ~140 m (chi-squared – misfit at 68% confidence). The peak amplitude of each arrival was measured and corrected for geometric spreading loss to estimate the source level (units of dB are 1 micro-Pa @ 1 m). There are additional range-dependent location biases related to anomalies in the water column velocity structure and unmodeled bathymetric effects, which influence the travel times of the sea surface- and seafloor-bouncing arrivals recorded in the caldera. See Le Saout et al. (2020 G-Cubed) for discussion. The data file is in comma-separated ASCII text format and contains the latitude, longitude, acoustic source level, and origin time (year, month, day, hour, minute, second) for acoustic events associated with lava extrusion during the April-May 2015 eruption of Axial Seamount. The data file was generated as part of a project called Research: Earthquake Catalog and Waveform Analysis to Assess the Evolution of Axial Seamount Surrounding the 2015 Eruption. Funding was provided by NSF grant OCE16-35276.
DOI: 10.1594/ieda/312895
title: Processed ship-based Navigation Data acquired during the Vema expedition V1501A (1958)

description: This data set was acquired with a ship-based Navigation system during Vema expedition V1501A conducted in 1958 (Chief Scientist: Dr. Joseph Worzel). These data files are of Text File (ASCII) format and include Navigation data and were processed after data collection.
DOI: 10.1594/ieda/314421
title: Processed Electrochemical Sensor Data collected using the Jason II ROV from the Ridge2000 Lau Focus Site during Thomas G. Thompson expedition TN235 (2009)

description: This data set was acquired with an AIS DLK-SubIII Electrochemical Sensor on the Jason II ROV during Thomas G. Thompson expedition TN235 conducted in 2009 (Chief Scientist: Dr. Charles Fisher; Investigator: Dr. George Luther). The data file is in Microsoft Excel format and includes Electrochemistry data that was processed after collection. The data was acquired as part of the project called Processes and patterns in back arc basin hydrothermal vent communities. Funding was provided by NSF grants: OCE07-32333 and OCE07-32439. This data was cited by Yucel et al., 2011, Luther et al., 2011, Luther et al., 2012, and Gartman et al, 2011.
DOI: 10.1594/ieda/314812
title: Ship-based Trackline Geophysical Data (MGD77) acquired during the Maurice Ewing expedition EW0108 (2001)

description: This data set was acquired with a ship-based BellAerospace BGM-3 Gravimeter and Atlas Hydrosweep DS2 Multibeam Sonar system during Maurice Ewing expedition EW0108 conducted in 2001 (Chief Scientist: Dr. Brian Taylor). These data files are of MGD77 format and include Gravity Field and Singlebeam Bathymetry data and were processed after data collection. Data were acquired as part of the project(s): Deep Seismic Imaging of Active Continental Extension in the Gulf of Corinth, and funding was provided by NSF grant(s): OCE00-99277.
DOI: 10.26022/ieda/329776
title: Processed Acoustic Backscatter, Sidescan and Swath Bathymetry Data acquired during R/V Nathaniel B. Palmer expedition NBP1603 (2016)

description: This data set was acquired with a Kongsberg Maritime EM122 Multibeam Sonar during R/V Nathaniel B. Palmer expedition NBP1603 conducted in 2016 (Chief Scientist: Dr. Craig Smith). These data files are of MBSystem-compatible format and include Acoustic Backscatter, Sidescan and Swath Bathymetry data that were processed after acquisition. This data was processed by the GMRT Team and was included in the Global Multi-Resolution Topography (GMRT) Synthesis (version 3.8).
DOI: 10.26022/ieda/329765
title: Processed Acoustic Backscatter, Sidescan and Swath Bathymetry Data acquired during R/V Knorr Field:Marine:Transit KN210-03 (2013)

description: This data set was acquired with a SeaBeam Instruments 3012-P1 Multibeam Sonar during R/V Knorr Field:Marine:Transit KN210-03 conducted in 2013 (Chief Scientist: ). These data files are of MBSystem-compatible format and include Acoustic Backscatter, Sidescan and Swath Bathymetry data that were processed after acquisition. This data was processed by the GMRT Team and was included in the Global Multi-Resolution Topography (GMRT) Synthesis (version 3.8).
DOI: 10.26022/ieda/331315
title: Bathymetry data (netCDF grid format) from the Galapagos Platform area (AT50-09BC, 2023)

description: This data set presents EM124 shipboard multibeam data from various locations around and on the Galapagos Platform, collected during R/V Atlantis leg AT50-09BC in April 2023 that included 22 Alvin HOV dives. The multibeam data were acquired to fill in areas where previous mapping around the Platform, carried out in 2000, 2001 and 2010, was incomplete, and to serve as base maps to plan and execute Alvin dives. The AT50-09BC expedition is a collaborative project between UK and USA scientists at U. Bristol, U. Essex, Boise State U. and Woods Hole Oceanographic Institution (WHOI). The objective of this multidisciplinary research is to investigate the shallow and deeper portions of the Galapagos Platform to better understand the geological evolution of this important volcanic archipelago and the biological and climate records contained in the fauna. The project is funded through research grants from the Natural Environment Research Council in the UK, and from the Ocean Sciences Division of the National Science Foundation in the USA.Bathymetric mapping was a major component of the activities of the expedition as accurate maps were essential in dive planning and in dive site selection (see site maps with each dive summary in the cruise report). The multibeam data collection, quality control, data processing, and ping editing were undertaken by many members of the science team as part of regular watch-standing shifts and was headed by Shannon Hoy from NOAA-Ocean Exploration, who led the production of final map products and the compiled dive maps. Both QPS Qimera and Fledermaus were used for multibeam processing, editing, and visualization. ArcGIS and Fledermaus were used for compiling map data and planning dive traverses. Areas mapped included the following totals: Costa Rica EEZ (during transit) = 5019 km2; Ecuadorian EEZ = 19,055 km2; Area mapped inside the Galapagos National Park = 16,796 km2. Total seafloor mapped = 24,074 km2 (approximately the size of Rwanda or New Hampshire). The data files are in GMT-compatible netCDF grid format.
DOI: 10.1594/ieda/311576
title: Processed ship-based Navigation Data acquired during the Maurice Ewing expedition EW9805 (1998)

description: This data set was acquired with a ship-based Navigation system during Maurice Ewing expedition EW9805 conducted in 1998 (Chief Scientist: Dr. David Manderfield). These data files are of Text File (ASCII) format and include Navigation data and were processed after data collection. Data were acquired as part of the project(s): Western Geophysical Job Number 0173-9A-012, and funding was provided by NSF grant(s): WG-XXX.
DOI: 10.26022/ieda/329769
title: Machine-learning predicted logarithmic values of marine benthic vertical sediment accumulation rate on the seafloor

description: This data set consists of logarithmic values of machine-learning-based vertical sediment accumulation rates along the seafloor, globally. The Geospatial Predictive Seafloor Model (GPSM) of the United States Naval Research Laboratory was trained on real-world observations from 89 peer-reviewed sources (n = 1031) to predict marine accumulation rates on a 5-arc-minute map using a k-nearest neighbor algorithm. Original (non-log space values) are in cm/yr. The model and results are described in Restreppo et al. (2020). The data files are in netCDF grid format. The file called prediction.nc contains the predicted sediment accumulation rate in cm/yr. File prediction_sdev.nc is the standard deviation.
DOI: 10.26022/ieda/329767
title: Processed Acoustic Backscatter, Sidescan and Swath Bathymetry Data acquired during R/V Roger Revelle expedition RR1316 (2013)

description: This data set was acquired with a Kongsberg Maritime EM122 Multibeam Sonar during R/V Roger Revelle expedition RR1316 conducted in 2013 (Chief Scientist: Dr. Andrew Lucas). These data files are of MBSystem-compatible format and include Acoustic Backscatter, Sidescan and Swath Bathymetry data that were processed after acquisition. This data was processed by the GMRT Team and was included in the Global Multi-Resolution Topography (GMRT) Synthesis (version 3.8).
DOI: 10.26022/ieda/329771
title: ROV Jason II navigation and along-track data at the Havre Volcano Caldera in the Kermadec Arc (RR1506, 2015)

description: A research expedition to investigate the products of the 2012 eruption of Havre Volcano in the Kermadec Arc was conducted in 2015 with ROV Jason II and AUV Sentry during Revelle cruise RR1506 (chief scientists Rebecca Carey, Adam Soule). A total of 12 ROV Jason II dives were conducted in and around the caldera. Jason II navigation and along-track data are sampled at 1Hz and provided here as ASCII comma-separated text files, with column headers. Data was collected and processed as part of the project called Elucidating Conduit, Eruption, and Pyroclast Transport Dynamics of Large Silicic Submarine Eruptions. Funding was provided from NSF awards OCE13-57216 to Adam Soule and OCE13-57443 to Bruce Houghton and Rebecca Carey.
DOI: 10.1594/ieda/323830
title: Raw Temperature Data from the Antarctic Peninsula acquired during R/V Laurence M. Gould expedition LMG1603 (2016)

description: This data set was acquired with a Sippican MK21 Expendable CTD during R/V Laurence M. Gould expedition LMG1603 conducted in 2016 (Chief Scientist: USAP Marine Manager, Investigator: USAP Marine Manager). These data files are of Sippican MK21 Export Data File format and include Temperature data that have not been processed.
DOI: 10.26022/ieda/331318
title: Bottom pressure estimates from a ROMS hydrodynamic model of the Gulf of Alaska for years 2018 and 2019

description: This is a netCDF file of bottom pressures based on ROMS (Regional Ocean Modeling System) numerical model output, interpolated to a regular latitude-longitude grid. The modeled seafloor pressures are presented as a function of time (a 3-D matrix with dimensions corresponding to latitude, longitude, time) and the model output spans the space and time limits of the Alaska Amphibious Community Seismic Experiment in the Gulf of Alaska. The pressure data variable is named "presstot_latlon" in the file. The units are Pascals. Detail of the model structure are available in Coyle et al. (2019).