cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21233/mtjv-et67
title: Stagno di Chia charcoal dataset

description: Raw data for the Stagno di Chia charcoal dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.xrrwnj
title: Occurrence Download

description: A dataset containing 18932 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-129.81572 20.7846,-59.72509 20.7846,-59.72509 48.82894,-129.81572 48.82894,-129.81572 20.7846))",
 "HasGeospatialIssue is false",
 "TaxonKey is Micropterus punctulatus (Rafinesque, 1819)"
 ]
}

 The dataset includes 18932 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026082-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/hmj1-1m09
title: LDDsite3891 ostracode surface sample dataset

description: Raw data for the LDDsite3891 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.15387227
title: Software Sustainability Evaluation Data

description: This is the dataset for our ECMFA 2025 paper "Using MDE to support sustainable software re-engineering".
DOI: 10.5281/zenodo.15387228
title: Software Sustainability Evaluation Data

description: This is the dataset for our ECMFA 2025 paper "Using MDE to support sustainable software re-engineering".
DOI: 10.15468/dl.3n7zmn
title: Occurrence Download

description: A dataset containing 304 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "TaxonKey is Helarctos malayanus (Raffles, 1822)"
 ]
}

 The dataset includes 304 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026083-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/f9wr-mn32
title: Sturgeon Lakes ostracode surface sample dataset

description: Raw data for the Sturgeon Lakes ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/0g72-hz79
title: LRRB2 pollen surface sample dataset

description: Raw data for the LRRB2 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.g7cjd3
title: Occurrence Download

description: A dataset containing 328 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pristimantis orpacobates (Lynch, Ruiz-Carranza & Ardila-Robayo, 1994)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 328 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026085-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n9gh2h
title: Occurrence Download

description: A dataset containing 15681 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Hippocampus hippocampus (Linnaeus, 1758), Sphyrna zygaena (Linnaeus, 1758), Stenella coeruleoalba (Meyen, 1833), Acipenser sturio Linnaeus, 1758, Mobula mobular (Bonnaterre, 1788), Globicephala melas (Traill, 1809), Melanitta fusca (Linnaeus, 1758), Dasyatis pastinaca (Linnaeus, 1758), Mycteroperca marginata (Lowe, 1834), Chimaera monstrosa Linnaeus, 1758, Thunnus thynnus (Linnaeus, 1758), Desmophyllum pertusum (Linnaeus, 1758), Physeter macrocephalus Linnaeus, 1758, Carcharhinus leucas (Müller & Henle, 1839), Tursiops truncatus (Montagu, 1821), Squatina squatina (Linnaeus, 1758), Eunicella singularis (Esper, 1791), Leucoraja fullonica (Linnaeus, 1758), Raja brachyura Lafont, 1871, Mustelus asterias Cloquet, 1819, Cetorhinus maximus (Gunnerus, 1765), Pristis pristis (Linnaeus, 1758), Galeorhinus galeus (Linnaeus, 1758))"
 ]
}

 The dataset includes 15681 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026084-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7mxraw
title: Occurrence Download

description: A dataset containing 142874 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Vachellia Wight & Arn."
 ]
}

 The dataset includes 142874 records from 771 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026070-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/1x9t-hv60
title: Appleman Lake charcoal dataset

description: Raw data for the Appleman Lake charcoal dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.q3kxzy
title: Occurrence Download

description: A dataset containing 726 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.26.2_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Insecta",
 "Year 2020-2025"
 ]
}

 The dataset includes 726 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026087-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/7fg6-3638
title: Little Echo Pond water chemistry dataset

description: Raw data for the Little Echo Pond water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.57703/ce-bb6wy
title: P13_SurfaceTopographyChallenge_IWM

description: Surface Topography Challenge 2022, Fraunhofer Institute for Mechanics of Materials IWM, Woehlerstr. 11 | 79108 Freiburg, Germany, Dr. Tobias Amann, tobias.amann@iwm.fraunhofer.de, +49 761 5142-208
DOI: 10.21233/hhqq-q440
title: Chub L. diatom dataset

description: Raw data for the Chub L. diatom dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.ssysza
title: Occurrence Download

description: A dataset containing 157 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Mongolia)",
 "TaxonKey is Arachniodes festina (Hance) Ching"
 ]
}

 The dataset includes 157 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026088-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/r7em-cs91
title: Lake Malawi MAL05-1 pollen dataset

description: Raw data for the Lake Malawi MAL05-1 pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/a2yd-7322
title: LDDsite6623 water chemistry dataset

description: Raw data for the LDDsite6623 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/3wy1-b305
title: 11RI337 vertebrate fauna dataset

description: Raw data for the 11RI337 vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/tdxq-eb72
title: KYLE20 pollen surface sample dataset

description: Raw data for the KYLE20 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.15387149
title: Data for "Symmetries in Montane Species Ranges Elucidate the Mechanistic Link between Environment and Abundance"

description: Description of the data and file structure

 

Files and variables

 

File: eap_geb_data.xlsx

 

Description: 

 

The datafile contains 9 sheets. Details of specific column names are listed at the top of each sheet.

 

1\. [A.SD] [Asymmetry derived using standard deviation]

 

2\. [A.No] [Asymmetry derived using number of records]

 

3\. [A.Pk] [Asymmetry derived using the shape near the peak]

 

Each of the above sheets contain columns for species names, observed species values, and 400 simulated species values.

 

4\. [Spearman] [Spearman Rank Correlation between Asymmetry and Modal Elevation for observed species values, and 400 simulated species values.]

 

5\. [OrthoRegress] [Orthogonal Linear Regression between Asymmetry and Modal Elevation for observed species values, and 400 simulated species values.]

 

6\. [UnweightRegress] [Unweighted Linear Regression between Asymmetry and Modal Elevation for observed species values, and 400 simulated species values.]

 

7\. [CumulativeProfile] [Community mean (species-averaged) Abundance profile for observed species values, and 400 simulated species values.]

 

8\. [K-SD-eta-alpha] [Simulated look-up table for the dependence of kurtosis on the trait-fitness power index]

 

9\. [Table-manuscript] [Appears as Table 2 in the manuscript and references quoted values to how they were derived from the previous sheets.]

 

Code/software

 

SOFTWARE VERSIONS

 

400 profiles were simulated for each species using the negative binomial random number generator (Lindén and Mäntyniemi 2011; rnbinom in R; R Core Team 2021).

 

All hypotheses were tested using two-tailed tests and errors from Monte-Carlo simulations.

 

All analyses were performed using custom scripts written in the R computing platform.

 

REFERENCES

 

1. Lindén, Andreas, and Samu Mäntyniemi. 2011. “Using the Negative Binomial Distribution to Model Overdispersion in Ecological Count Data.” Ecology 92 (7): 1414–21. https://doi.org/10.1890/10-1831.1.

 

2. R Core Team. 2021. “R: A Language and Environment for Statistical Computing.” Vienna, Austria: R Foundation for Statistical Computing. https://www.r-project.org/.
DOI: 10.5281/zenodo.15387150
title: Data for "Symmetries in Montane Species Ranges Elucidate the Mechanistic Link between Environment and Abundance"

description: Description of the data and file structure

 

Files and variables

 

File: eap_geb_data.xlsx

 

Description: 

 

The datafile contains 9 sheets. Details of specific column names are listed at the top of each sheet.

 

1\. [A.SD] [Asymmetry derived using standard deviation]

 

2\. [A.No] [Asymmetry derived using number of records]

 

3\. [A.Pk] [Asymmetry derived using the shape near the peak]

 

Each of the above sheets contain columns for species names, observed species values, and 400 simulated species values.

 

4\. [Spearman] [Spearman Rank Correlation between Asymmetry and Modal Elevation for observed species values, and 400 simulated species values.]

 

5\. [OrthoRegress] [Orthogonal Linear Regression between Asymmetry and Modal Elevation for observed species values, and 400 simulated species values.]

 

6\. [UnweightRegress] [Unweighted Linear Regression between Asymmetry and Modal Elevation for observed species values, and 400 simulated species values.]

 

7\. [CumulativeProfile] [Community mean (species-averaged) Abundance profile for observed species values, and 400 simulated species values.]

 

8\. [K-SD-eta-alpha] [Simulated look-up table for the dependence of kurtosis on the trait-fitness power index]

 

9\. [Table-manuscript] [Appears as Table 2 in the manuscript and references quoted values to how they were derived from the previous sheets.]

 

Code/software

 

SOFTWARE VERSIONS

 

400 profiles were simulated for each species using the negative binomial random number generator (Lindén and Mäntyniemi 2011; rnbinom in R; R Core Team 2021).

 

All hypotheses were tested using two-tailed tests and errors from Monte-Carlo simulations.

 

All analyses were performed using custom scripts written in the R computing platform.

 

REFERENCES

 

1. Lindén, Andreas, and Samu Mäntyniemi. 2011. “Using the Negative Binomial Distribution to Model Overdispersion in Ecological Count Data.” Ecology 92 (7): 1414–21. https://doi.org/10.1890/10-1831.1.

 

2. R Core Team. 2021. “R: A Language and Environment for Statistical Computing.” Vienna, Austria: R Foundation for Statistical Computing. https://www.r-project.org/.
DOI: 10.15468/dl.stztwm
title: Occurrence Download

description: A dataset containing 1762 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pristimantis palmeri (Boulenger, 1912)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1762 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026090-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.npwmpq
title: Occurrence Download

description: A dataset containing 322 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Artportalen",
 "OccurrenceStatus is Present",
 "TaxonKey is Salvelinus alpinus (Linnaeus, 1758)"
 ]
}

 The dataset includes 322 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026091-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/12js-xp57
title: LDDsite1421 water chemistry dataset

description: Raw data for the LDDsite1421 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/vt86-3c92
title: Guest Mammoth [8MR130] vertebrate fauna dataset

description: Raw data for the Guest Mammoth [8MR130] vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/cxdw-0k25
title: Yaeyama District ostracode surface sample dataset

description: Raw data for the Yaeyama District ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/wbq4-4a54
title: Bílé Karpaty 39 pollen surface sample dataset

description: Raw data for the Bílé Karpaty 39 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/vz95-6257
title: Round Grove Lake pollen dataset

description: Raw data for the Round Grove Lake pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/5d84-cq09
title: Woodhull L. water chemistry dataset

description: Raw data for the Woodhull L. water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/fbz1-2w62
title: Zhenglan Banner ostracode surface sample dataset

description: Raw data for the Zhenglan Banner ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.15371054
title: Canned tropical tuna supply in Bilbao

description: Dataset of the canned tropical tuna supply in Bilbao obtained from a sampling performed between October and November 2023. The dataset has 292 observations and variables related to product labelling information regarding the species, the locations and methods of capture, the presence of sustainability labels and traceability mechanisms accessible to consumers.
DOI: 10.21233/kq5r-xe47
title: Lago del Greppo charcoal dataset

description: Raw data for the Lago del Greppo charcoal dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.g9sshf
title: Occurrence Download

description: A dataset containing 715 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pristimantis savagei (Pyburn & Lynch, 1981)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 715 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026092-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/baa1-7j24
title: Fourth Machias Lake diatom surface sample dataset

description: Raw data for the Fourth Machias Lake diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/d6ve-r058
title: Smith and Sayles Reservoir diatom bottom sample dataset

description: Raw data for the Smith and Sayles Reservoir diatom bottom sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/d6jn-h177
title: Ankasa (ANK02) pollen trap dataset

description: Raw data for the Ankasa (ANK02) pollen trap dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/hzdw-ed51
title: Penza testate amoebae surface sample dataset

description: Raw data for the Penza testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/073d-b561
title: Tiandouyang testate amoebae surface sample dataset

description: Raw data for the Tiandouyang testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.gfjmzq
title: Occurrence Download

description: A dataset containing 2588402 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "DatasetKey is 2023 Contributions of Plant Specimen Data inside China",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 2588402 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026081-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/v3ng-s034
title: Coot Shallow diatom surface sample dataset

description: Raw data for the Coot Shallow diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.