cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7455261
title: Determinants of associations between codon and amino acid usage patterns of microbial communities and the environment inferred based on a cross-biome metagenomic analysis

description: Raw data set for npj Bioflims and Microbiome article: “Determinants of associations between codon and amino acid usage patterns of microbial communities and the environment inferred based on a cross-biome metagenomic analysis”
description: This work is funded partly by PBC post doctoral fellowship from the Israeli Concil of Higher Education and Research and partly by post doctoral fellowship from The Edmond J. Safra Center for Bioinformatics at Tel Aviv University, Israel.
DOI: 10.5281/zenodo.7455260
title: Determinants of associations between codon and amino acid usage patterns of microbial communities and the environment inferred based on a cross-biome metagenomic analysis

description: Raw data set for npj Bioflims and Microbiome article: “Determinants of associations between codon and amino acid usage patterns of microbial communities and the environment inferred based on a cross-biome metagenomic analysis”
description: This work is funded partly by PBC post doctoral fellowship from the Israeli Concil of Higher Education and Research and partly by post doctoral fellowship from The Edmond J. Safra Center for Bioinformatics at Tel Aviv University, Israel.
DOI: 10.5683/sp2/4zgwgs
title: Experimental Farm: Building 95 - Integrated Project Dossier (2019)

description: Building 95 also known as the Small Dairy Barn of the Canada Agriculture and Food Museum located at 901 Prince of Wales Dr, Ottawa is a Recognized Federal Heritage Building. It has both historic and architectural heritage value. Building 95 is closely associated with a government research project undertaken between 1910 and 1920. The aesthetically pleasing design of the barn is reminiscent of the “Wisconsin Barn” type of the mid-west United States popular at the end of the 19th century, the barn has a host of features that contribute to its heritage value and make it an interesting research project. Building 95 or informally known as Meadowview Barn is a small dairy farm located on 901 Prince of Wales Drive and a part of the Nepean Community. The Wisconsin style house is adjacent to the Agricultural Museum at the Central Experimental Farm National Historic Site of Canada in Ottawa. The building covers 2400 ft^2 and after many external and internal modifications, it has become a two-story rental space. Due to the fragile conditions of the building the function altered from a dairy farm to rental space for sheep shows and weddings. This is the Integrated Project Dossier compiled by a group of undergraduate students of the Architectural Conservation and Sustainability Program (Engineers and architects) at Carleton University for the CIVE3207 (ARCN4100) Historic Site Recording and Assessment course in 2019.
DOI: 10.6084/m9.figshare.21524286.v2
title: Meta-analysis of public RNA sequencing data of queens and workers in social Hymenoptera and termites

description: Table_S1: The reference genome and transcriptome used for quantifying the gene expression level <br> Table_S2: Datasets for meta-analysis of public RNA-sequencing data in eusocial insects <br> Table_S3: Gene expression ratios when comparing queens and workers (QW-ratio) <br> Table_S4: QW-score calculated based on the QW-ratio <br> Table_S5: QW-score by species <br> peptide.tar.gz: The files of amino acid sequences newly created for the present study <br> transcript.tar.gz: The files of transcript sequences newly created for the present study <br> <br>
DOI: 10.5281/zenodo.7455193
title: Cowpea drought stress application at early vegetative stage 2022 - screen 03 - day 06 - raw image data

description: Cowpea (<em>Vigna unguiculata</em>) miniCore accessions were screened for responses to drought stress at early vegetative stress. The cowpea seedlings were exposed to drought stress at 17 days after germination using the weight of the pot and AAWEsmo device, developed in Julkowska Lab, Boyce Thompson Institute. The seedlings were kept at 60 and 10% of soil water holding capacity for 2 weeks and the data on cowpea shoot size, evapotranspiration and photosystem II efficiency was collected. This dataset represents the images collected for Screen number 03 and day 06 after drought stress application.
DOI: 10.5281/zenodo.7455192
title: Cowpea drought stress application at early vegetative stage 2022 - screen 03 - day 06 - raw image data

description: Cowpea (<em>Vigna unguiculata</em>) miniCore accessions were screened for responses to drought stress at early vegetative stress. The cowpea seedlings were exposed to drought stress at 17 days after germination using the weight of the pot and AAWEsmo device, developed in Julkowska Lab, Boyce Thompson Institute. The seedlings were kept at 60 and 10% of soil water holding capacity for 2 weeks and the data on cowpea shoot size, evapotranspiration and photosystem II efficiency was collected. This dataset represents the images collected for Screen number 03 and day 06 after drought stress application.
DOI: 10.5517/ccdc.csd.cc26kd9h
title: CCDC 2042506: Experimental Crystal Structure Determination

description: Related Article: Anastasia A. Fesenko, Mikhail S. Grigoriev, Vladimir B. Arion, Anatoly D. Shutalev|2022|J.Org.Chem.|87|15722|doi:10.1021/acs.joc.2c01199
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26kdbj
title: CCDC 2042507: Experimental Crystal Structure Determination

description: Related Article: Anastasia A. Fesenko, Mikhail S. Grigoriev, Vladimir B. Arion, Anatoly D. Shutalev|2022|J.Org.Chem.|87|15722|doi:10.1021/acs.joc.2c01199
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26kdck
title: CCDC 2042508: Experimental Crystal Structure Determination

description: Related Article: Anastasia A. Fesenko, Mikhail S. Grigoriev, Vladimir B. Arion, Anatoly D. Shutalev|2022|J.Org.Chem.|87|15722|doi:10.1021/acs.joc.2c01199
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7148328
title: Dataset from: Leveraging open tools to realize the potential of self-archiving: A cohort study in clinical trials

description: This record includes the data associated with the study "Leveraging open tools to increase the potential of self-archiving to increase discoverability: A cohort study in clinical trials". The code used to generate these data is available under an open license in GitHub (https://github.com/delwen/oa-archiving-permissions). The deposit includes: - `intovalue.csv`: download of the IntoValue dataset (IntoValue 1 and IntoValue 2), which is actively maintained in GitHub (https://github.com/maia-sh/intovalue-data). The data was downloaded on 3 October 2022. More information on the generation of this dataset can be found at: https://doi.org/10.5281/zenodo.5141343. This data corresponds to the start of the trial screening flow diagram in the manuscript (n = 3,788). - `oa-unpaywall.csv`: dataset containing the results of the Unpaywall API query (query date: 3 October 2022). The dataset queried includes the following adaptations from `intovalue.csv`: As updated registry data had been downloaded on 19 May 2022, the IntoValue inclusion criteria were re-applied: Interventional Study completion date between 2009 and 2017 Complete based on study status Conducted by a German university medical center. The dataset was further limited to: Unique trials (trials from IntoValue 2 were preserved) Unique publications with a DOI - `oa-syp-permissions.csv`: dataset containing the results of the Shareyourpaper API query (query date: 3 October 2022). The dataset queried is the same as in `oa-unpaywall.csv`. - `oa-merged-data.csv`: dataset containing the merged Unpaywall and Shareyourpaper data for all clinical trial results publications considered in this study. The dataset was further limited to publications that resolved in Unpaywall and were published between 2010 - 2020 (based on the publication date in Unpaywall). This is the main dataset underlying the analyses in the manuscript.
description: This research was funded by the Bundesministerium für Bildung und Forschung, grant number 01PW18012.
DOI: 10.5281/zenodo.7154254
title: Dataset from: Leveraging open tools to realize the potential of self-archiving: A cohort study in clinical trials

description: This record includes the data associated with the study "Leveraging open tools to increase the potential of self-archiving to increase discoverability: A cohort study in clinical trials". The code used to generate these data is available under an open license in GitHub (https://github.com/delwen/oa-archiving-permissions). The deposit includes: - `intovalue.csv`: download of the IntoValue dataset (IntoValue 1 and IntoValue 2), which is actively maintained in GitHub (https://github.com/maia-sh/intovalue-data). The data was downloaded on 3 October 2022. More information on the generation of this dataset can be found at: https://doi.org/10.5281/zenodo.5141343. This data corresponds to the start of the trial screening flow diagram in the manuscript (n = 3,788). - `oa-unpaywall.csv`: dataset containing the results of the Unpaywall API query (query date: 3 October 2022). The dataset queried includes the following adaptations from `intovalue.csv`: As updated registry data had been downloaded on 19 May 2022, the IntoValue inclusion criteria were re-applied: Interventional Study completion date between 2009 and 2017 Complete based on study status Conducted by a German university medical center. The dataset was further limited to: Unique trials (trials from IntoValue 2 were preserved) Unique publications with a DOI - `oa-syp-permissions.csv`: dataset containing the results of the Shareyourpaper API query (query date: 3 October 2022). The dataset queried is the same as in `oa-unpaywall.csv`. - `oa-merged-data.csv`: dataset containing the merged Unpaywall and Shareyourpaper data for all clinical trial results publications considered in this study. The dataset was further limited to journal articles that resolved in Unpaywall and were published between 2010 - 2020 (based on the publication date in Unpaywall). This is the main dataset underlying the analyses in the manuscript.
description: This research was funded by the Bundesministerium für Bildung und Forschung, grant number 01PW18012.
DOI: 10.5281/zenodo.7148327
title: Dataset from: Leveraging open tools to realize the potential of self-archiving: A cohort study in clinical trials

description: This record includes the data associated with the study "Leveraging open tools to increase the potential of self-archiving to increase discoverability: A cohort study in clinical trials". The code used to generate these data is available under an open license in GitHub (https://github.com/delwen/oa-archiving-permissions). The deposit includes: - `intovalue.csv`: download of the IntoValue dataset (IntoValue 1 and IntoValue 2), which is actively maintained in GitHub (https://github.com/maia-sh/intovalue-data). The data was downloaded on 17 December 2022. More information on the generation of this dataset can be found at: https://doi.org/10.5281/zenodo.5141343. This data corresponds to the start of the trial screening flow diagram in the manuscript (n = 3,788). - `oa-unpaywall.csv`: dataset containing the results of the Unpaywall API query (query date: 17 December 2022). The dataset queried includes the following adaptations from `intovalue.csv`: As updated registry data had been downloaded on 1 November 2022, the IntoValue inclusion criteria were re-applied: Interventional Study completion date between 2009 and 2017 Complete based on study status Conducted by a German university medical center. The dataset was further limited to: Unique trials (trials from IntoValue 2 were preserved) Unique publications with a DOI - `oa-syp-permissions.csv`: dataset containing the results of the Shareyourpaper API query (query date: 17 December 2022). The dataset queried is the same as in `oa-unpaywall.csv`. - `oa-merged-data.csv`: dataset containing the merged Unpaywall and Shareyourpaper data for all clinical trial results publications considered in this study. The dataset was further limited to journal articles that resolved in Unpaywall and were published between 2010 - 2020 (based on the publication date in Unpaywall). This is the main dataset underlying the analyses in the manuscript.
description: This research was funded by the Bundesministerium für Bildung und Forschung, grant number 01PW18012.
DOI: 10.5281/zenodo.7455187
title: Cowpea drought stress application at early vegetative stage 2022 - screen 03 - day 04 - raw image data

description: Cowpea (<em>Vigna unguiculata</em>) miniCore accessions were screened for responses to drought stress at early vegetative stress. The cowpea seedlings were exposed to drought stress at 17 days after germination using the weight of the pot and AAWEsmo device, developed in Julkowska Lab, Boyce Thompson Institute. The seedlings were kept at 60 and 10% of soil water holding capacity for 2 weeks and the data on cowpea shoot size, evapotranspiration and photosystem II efficiency was collected. This dataset represents the images collected for Screen number 03 and day 04 after drought stress application.
DOI: 10.5281/zenodo.7455186
title: Cowpea drought stress application at early vegetative stage 2022 - screen 03 - day 04 - raw image data

description: Cowpea (<em>Vigna unguiculata</em>) miniCore accessions were screened for responses to drought stress at early vegetative stress. The cowpea seedlings were exposed to drought stress at 17 days after germination using the weight of the pot and AAWEsmo device, developed in Julkowska Lab, Boyce Thompson Institute. The seedlings were kept at 60 and 10% of soil water holding capacity for 2 weeks and the data on cowpea shoot size, evapotranspiration and photosystem II efficiency was collected. This dataset represents the images collected for Screen number 03 and day 04 after drought stress application.
DOI: 10.3886/e183165
title: Revised Reproduction Package for 'Mental Health Costs of Lockdowns: Evidence from Age-Specific Curfews in Turkey' - Hennigan et al. (2022)

description: The following package includes the original reproduction package of "Mental Health Costs of Lockdowns: Evidence from Age-Specific Curfews in Turkey" - Altindag et al. (American Economic Journal: Applied Economics, 2022). We have updated the code, which now works for Stata 17 and includes a more detailed read me file. It also contains the do files of the replication analysis carried out by Hennigan et al. (2022) which has been uploaded to the Social Sciences Reproduction Platform. As part of the replication, robustness checks are carried out to the results of Altindag et al. (2022)
DOI: 10.3886/e183165v1
title: Revised Reproduction Package for 'Mental Health Costs of Lockdowns: Evidence from Age-Specific Curfews in Turkey' - Hennigan et al. (2022)

description: The following package includes the original reproduction package of "Mental Health Costs of Lockdowns: Evidence from Age-Specific Curfews in Turkey" - Altindag et al. (American Economic Journal: Applied Economics, 2022). We have updated the code, which now works for Stata 17 and includes a more detailed read me file. It also contains the do files of the replication analysis carried out by Hennigan et al. (2022) which has been uploaded to the Social Sciences Reproduction Platform. As part of the replication, robustness checks are carried out to the results of Altindag et al. (2022)
DOI: 10.6084/m9.figshare.3761562.v2429
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.5517/ccdc.csd.cc2bnpd3
title: CCDC 2164835: Experimental Crystal Structure Determination

description: Related Article: Yanjun Chen, Shengmei Zhou, Weiqun Yang, Shaofeng Liu|2022|Organometallics|41|3724|doi:10.1021/acs.organomet.2c00485
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bnpf4
title: CCDC 2164836: Experimental Crystal Structure Determination

description: Related Article: Yanjun Chen, Shengmei Zhou, Weiqun Yang, Shaofeng Liu|2022|Organometallics|41|3724|doi:10.1021/acs.organomet.2c00485
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c0df7
title: CCDC 2175128: Experimental Crystal Structure Determination

description: Related Article: Gregor Talajić, Edi Topić, Jerko Meštrović, Nikola Cindro|2022|J.Org.Chem.|87|16054|doi:10.1021/acs.joc.2c02200
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c0qty
title: CCDC 2175450: Experimental Crystal Structure Determination

description: Related Article: Zhikai Qi, Huizhi Gao, Xudong Zhu, Zhuoya Lu, Xian-Ming Zhang|2022|Inorg.Chem.|61|19483|doi:10.1021/acs.inorgchem.2c03409
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c0sx3
title: CCDC 2175515: Experimental Crystal Structure Determination

description: Related Article: Urszula K. Komarnicka, Sandra Kozie, Barbara Pucelik, Agata Barzowska, Miosz Siczek, Magdalena Malik, Daria Wojtala, Alessandro Niorettini, Agnieszka Kyzio, Victor Sebastian, Pavel Kopel, Stefano Caramori, Alina Bieńko|2022|Inorg.Chem.|61|19261|doi:10.1021/acs.inorgchem.2c03015
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c0sy4
title: CCDC 2175516: Experimental Crystal Structure Determination

description: Related Article: Urszula K. Komarnicka, Sandra Kozie, Barbara Pucelik, Agata Barzowska, Miosz Siczek, Magdalena Malik, Daria Wojtala, Alessandro Niorettini, Agnieszka Kyzio, Victor Sebastian, Pavel Kopel, Stefano Caramori, Alina Bieńko|2022|Inorg.Chem.|61|19261|doi:10.1021/acs.inorgchem.2c03015
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c80pc
title: CCDC 2182452: Experimental Crystal Structure Determination

description: Related Article: Bharti Singh, Natasha A. Chernova, Dibyajyoti Ghosh, Arunachalam Ramanan|2022|Cryst.Growth Des.|22|7090|doi:10.1021/acs.cgd.2c00791
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c80qd
title: CCDC 2182453: Experimental Crystal Structure Determination

description: Related Article: Bharti Singh, Natasha A. Chernova, Dibyajyoti Ghosh, Arunachalam Ramanan|2022|Cryst.Growth Des.|22|7090|doi:10.1021/acs.cgd.2c00791
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c80sg
title: CCDC 2182455: Experimental Crystal Structure Determination

description: Related Article: Bharti Singh, Natasha A. Chernova, Dibyajyoti Ghosh, Arunachalam Ramanan|2022|Cryst.Growth Des.|22|7090|doi:10.1021/acs.cgd.2c00791
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c80th
title: CCDC 2182456: Experimental Crystal Structure Determination

description: Related Article: Bharti Singh, Natasha A. Chernova, Dibyajyoti Ghosh, Arunachalam Ramanan|2022|Cryst.Growth Des.|22|7090|doi:10.1021/acs.cgd.2c00791
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c80vj
title: CCDC 2182457: Experimental Crystal Structure Determination

description: Related Article: Bharti Singh, Natasha A. Chernova, Dibyajyoti Ghosh, Arunachalam Ramanan|2022|Cryst.Growth Des.|22|7090|doi:10.1021/acs.cgd.2c00791
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.