cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23501022.v1
title: Supplementary Material for: Quality of life benefit and clinical predictors of complete skin clearance in psoriasis: a multicenter, prospective, real-world study

description: Background: Newer biologics, such as interleukin (IL)-17 inhibitors, make it possible to achieve complete skin clearance (CSC) in patients with moderate-to-severe psoriasis. However, the clinical meaningfulness and predictive factors of CSC in daily practice have not yet been fully investigated. 
Objective: The study was conducted to: firstly, assess the impact of CSC on Quality of life (QoL) improvements compared with treatment responses without clearance; secondly, identify clinical parameters as predictors of CSC response in psoriasis patients treated with ixekizumab. 
Methods: Patients attending 26 dermatology centers across china were recruited into this real-world setting between August 2020 and May 2022. Prospective cohort study in which response to ixekizumab was assessed using the Psoriasis Area and Severity Index (PASI) and Dermatology Quality of Life Index (DLQI). The absolute DLQI score and DLQI (0) response at weeks 12 were compared between groups achieving various levels of skin clearance. A stepwise logistic regression analysis was applied to identify which baseline clinical characteristics were predictive factors for CSC.
Results: After 12 weeks of treatment, 226 of 511 (44.2%) patients achieved CSC, defined as 100% improvement in PASI score (PASI-100). A significantly higher proportion of patients with CSC versus almost clear skin (PASI90-99) achieved DLQI score of 0, corresponding the experience of no impairment on QoL (54.4% vs 37.7%, p= 0.001). Females patients were more likely than males to achieve CSC response (odds ratio [OR] =1.83; 95% confidence interval [CI]: 1.24-2.70), while previous biologic treatment (OR=0.43; 95% CI: 0.24-0.81) and joint affected (OR=0.61; 95% CI: 0.42-0.89) was significantly associated with less CSC response.
Conclusions: This study highlights the fact that clinical parameters are important in determining CSC response in psoriasis. In daily practice, achieving CSC represents a clinically meaningful treatment goal, especially from the patient perspective.
DOI: 10.6084/m9.figshare.17209613
title: Appraising the effect of potential risk factors on thyroid cancer: A Mendelian randomization study

description: Appraising
the effect of potential risk factors on thyroid cancer: A Mendelian
randomization study
DOI: 10.6084/m9.figshare.25272451
title: RetroWISE-data.zip

description: Data used for RetroWISE
DOI: 10.6084/m9.figshare.25272451.v3
title: RetroWISE-data.zip

description: Data used for RetroWISE
DOI: 10.6084/m9.figshare.25272451.v2
title: RetroWISE-data.zip

description: Data used for RetroWISE
DOI: 10.5281/zenodo.10707082
title: [IO Islamic 2095] منشآت ملّا طغرا

description: Munsha’ât-i-Mullâ-Ṭughrâ

This manuscript is now IO Islamic 1591 in the India Office collections.

[metadata: Hermann Ethé, Catalogue of Persian Manuscripts in the Library of the India Office, 2 vols. (Oxford: India Office, 1903): volume 1, number 2095 here with notations and hyperlinks].


1591

Another copy of Ṭughrâ’s Mirât-alfutûḥ.

Mullâ Ṭughrâ’s مرآت الفتوح (see IV in No. 1586), beginning: يكه تازان ميدان الخ.

No date. A seal of Riḍâ ‘Alîkhân shown the year A.H. 1172 (A.D. 1758, 1759).

No. 2095, ff. 1-7, ll. 18-20; Shikasta; size, 8¾ in. by 4½ in.
DOI: 10.5281/zenodo.10707083
title: [IO Islamic 2095] منشآت ملّا طغرا

description: Munsha’ât-i-Mullâ-Ṭughrâ

This manuscript is now IO Islamic 1591 in the India Office collections.

[metadata: Hermann Ethé, Catalogue of Persian Manuscripts in the Library of the India Office, 2 vols. (Oxford: India Office, 1903): volume 1, number 2095 here with notations and hyperlinks].


1591

Another copy of Ṭughrâ’s Mirât-alfutûḥ.

Mullâ Ṭughrâ’s مرآت الفتوح (see IV in No. 1586), beginning: يكه تازان ميدان الخ.

No date. A seal of Riḍâ ‘Alîkhân shown the year A.H. 1172 (A.D. 1758, 1759).

No. 2095, ff. 1-7, ll. 18-20; Shikasta; size, 8¾ in. by 4½ in.
DOI: 10.18112/openneuro.ds004892.v1.0.0
title: Emo-FilM
DOI: 10.6084/m9.figshare.21928299
title: Kungurian (Cisuralian/Early Permian) brachiopods from the Snapper Point Formation, southern Sydney Basin, southeastern Australia

description: Elements of a high-latitude (∼60–70°S) and low-diversity early Kungurian (Cisuralian/Early Permian) brachiopod fauna have been sporadically reported from the sandstone-dominated Snapper Point Formation (SPF) in the southern Sydney Basin of southeastern Australia for more than a half-century, but a detailed description of this fauna is not yet available. In this paper we describe 12 brachiopod species and an indeterminate ingelarellid from the SPF, including one new species (<i>Tasmanospirifer jervisbayensis</i> sp. nov. Waterhouse & Lee). Though this brachiopod fauna is evidently associated with an interglacial stratigraphic interval, its taxonomic characteristics overall resemble those from stratigraphically bounding glacial intervals. This association is interpreted to indicate persistence and the strong endemic nature of the Permian Eastern Australian biogeographic province in high-latitude eastern Gondwana, regardless of glacial/interglacial climate states during the Cisuralian. Biostratigraphically, the SPF brachiopod fauna is divisible into two distinctive stratigraphic assemblages: the <i>Notospirifer</i> cf. <i>triplicata</i>–<i>Simplicisulcus</i> sp. Assemblage in the lower part of the formation and the <i>Johndearia brevis</i>–<i>Sulciplica transversa</i> Assemblage in the upper part, each distinguished by a set of unique species. <i>Sangmin Lee [sangminlee76@gmail.com] and</i> <i>G. R. Shi [guang@uow.edu.au] School of Earth, Atmospheric and Life Sciences, University of Wollongong Faculty of Science Medicine and Health, Northfields Avenue, Wollongong, NSW 2522, Australia</i> <i>Bruce Runnegar [runnegar@ucla.edu] Earth, Planetary and Space Sciences, University of California, Los Angeles, Los Angeles, CA 90095-1567, USA</i> <i>J. B. Waterhouse [permia@xtra.co.nz] Oamaru, Oamaru, New Zealand.</i>
DOI: 10.6084/m9.figshare.21928299.v1
title: Kungurian (Cisuralian/Early Permian) brachiopods from the Snapper Point Formation, southern Sydney Basin, southeastern Australia

description: Elements of a high-latitude (∼60–70°S) and low-diversity early Kungurian (Cisuralian/Early Permian) brachiopod fauna have been sporadically reported from the sandstone-dominated Snapper Point Formation (SPF) in the southern Sydney Basin of southeastern Australia for more than a half-century, but a detailed description of this fauna is not yet available. In this paper we describe 12 brachiopod species and an indeterminate ingelarellid from the SPF, including one new species (<i>Tasmanospirifer jervisbayensis</i> sp. nov. Waterhouse & Lee). Though this brachiopod fauna is evidently associated with an interglacial stratigraphic interval, its taxonomic characteristics overall resemble those from stratigraphically bounding glacial intervals. This association is interpreted to indicate persistence and the strong endemic nature of the Permian Eastern Australian biogeographic province in high-latitude eastern Gondwana, regardless of glacial/interglacial climate states during the Cisuralian. Biostratigraphically, the SPF brachiopod fauna is divisible into two distinctive stratigraphic assemblages: the <i>Notospirifer</i> cf. <i>triplicata</i>–<i>Simplicisulcus</i> sp. Assemblage in the lower part of the formation and the <i>Johndearia brevis</i>–<i>Sulciplica transversa</i> Assemblage in the upper part, each distinguished by a set of unique species. <i>Sangmin Lee [sangminlee76@gmail.com] and</i> <i>G. R. Shi [guang@uow.edu.au] School of Earth, Atmospheric and Life Sciences, University of Wollongong Faculty of Science Medicine and Health, Northfields Avenue, Wollongong, NSW 2522, Australia</i> <i>Bruce Runnegar [runnegar@ucla.edu] Earth, Planetary and Space Sciences, University of California, Los Angeles, Los Angeles, CA 90095-1567, USA</i> <i>J. B. Waterhouse [permia@xtra.co.nz] Oamaru, Oamaru, New Zealand.</i>
DOI: 10.6084/m9.figshare.19306861
title: A 1-year longitudinal study on COVID-19 convalescents reveals persistence of anti-SARS-CoV-2 humoral and cellular immunity

description: The immune memory of over 400 million COVID-19 convalescents is not completely understood. In this integrated study, we recorded the post-acute sequelae symptoms and tested the immune memories, including circulating antibodies, memory B cell, and memory CD4 or CD8 T cell responses of a cohort of 65 COVID-19 patients over 1-year after infection. Our data show that 48% of them still have one or more sequelae symptoms and all of them maintain at least one of the immune components. The chances of having sequelae symptoms or having better immune memory are associated with peak disease severity. We did four-time points sampling per subject to precisely understand the kinetics of durability of SARS-CoV-2 circulating antibodies. We found that the RBD IgG levels likely reach a stable plateau at around 6 months, albeit it is waning at the first 6 months after infection. At 1-year after infection, more than 90% of the convalescents generated memory CD4 or CD8 T memory responses, preferably against the SARS-CoV-2 M peptide pool. The convalescents also have polyfunctional and central memory T cells that could provide rapid and efficient response to SARS-CoV-2 re-infection. Based on this information, we assessed the immune protection against the Omicron variant and concluded that convalescents should still induce effective T cell immunity against the Omicron. By studying the circulating antibodies and memory B or T cell responses to SARS-CoV-2 in an integrated manner, our study provides insight into the understanding of protective immunity against diseases caused by secondary SARS-CoV-2 infection.
DOI: 10.6084/m9.figshare.19306861.v2
title: A 1-year longitudinal study on COVID-19 convalescents reveals persistence of anti-SARS-CoV-2 humoral and cellular immunity

description: The immune memory of over 400 million COVID-19 convalescents is not completely understood. In this integrated study, we recorded the post-acute sequelae symptoms and tested the immune memories, including circulating antibodies, memory B cell, and memory CD4 or CD8 T cell responses of a cohort of 65 COVID-19 patients over 1-year after infection. Our data show that 48% of them still have one or more sequelae symptoms and all of them maintain at least one of the immune components. The chances of having sequelae symptoms or having better immune memory are associated with peak disease severity. We did four-time points sampling per subject to precisely understand the kinetics of durability of SARS-CoV-2 circulating antibodies. We found that the RBD IgG levels likely reach a stable plateau at around 6 months, albeit it is waning at the first 6 months after infection. At 1-year after infection, more than 90% of the convalescents generated memory CD4 or CD8 T memory responses, preferably against the SARS-CoV-2 M peptide pool. The convalescents also have polyfunctional and central memory T cells that could provide rapid and efficient response to SARS-CoV-2 re-infection. Based on this information, we assessed the immune protection against the Omicron variant and concluded that convalescents should still induce effective T cell immunity against the Omicron. By studying the circulating antibodies and memory B or T cell responses to SARS-CoV-2 in an integrated manner, our study provides insight into the understanding of protective immunity against diseases caused by secondary SARS-CoV-2 infection.
DOI: 10.5519/qd.ovs06gr3
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (39 records)
DOI: 10.6084/m9.figshare.11966841
title: Additional file 3 of Improving accuracy of estimating glomerular filtration rate using artificial neural network: model development and validation

description: Additional file 3. An Excel file to implement the 9-variable ANN model.
DOI: 10.6084/m9.figshare.11966841.v1
title: Additional file 3 of Improving accuracy of estimating glomerular filtration rate using artificial neural network: model development and validation

description: Additional file 3. An Excel file to implement the 9-variable ANN model.
DOI: 10.6084/m9.figshare.16685508
title: Table S1. The Changshagou gold deposit, Eastern Tianshan, NW China: orogenic gold mineralization overprinting a porphyry gold occurrence

description: Summary of ages of tectonic, magmatic and gold mineralization events in the western segment of the Kanggur ductile shear zone.
DOI: 10.6084/m9.figshare.16685508.v1
title: Table S1. The Changshagou gold deposit, Eastern Tianshan, NW China: orogenic gold mineralization overprinting a porphyry gold occurrence

description: Summary of ages of tectonic, magmatic and gold mineralization events in the western segment of the Kanggur ductile shear zone.
DOI: 10.6084/m9.figshare.6338366
title: Additional file 3 of Investigation of the thermophilic mechanism in the genus Porphyrobacter by comparative genomic analysis

description: Summary of the substituted/substituting amino acid in Porphyrobacter cryptus DSM 12079T. (XLSX 8 kb)
DOI: 10.6084/m9.figshare.6338366.v1
title: Additional file 3 of Investigation of the thermophilic mechanism in the genus Porphyrobacter by comparative genomic analysis

description: Summary of the substituted/substituting amino acid in Porphyrobacter cryptus DSM 12079T. (XLSX 8 kb)
DOI: 10.34808/0k00-kp97
title: Miscanthus × giganteus root anatomical traits measurements
DOI: 10.21227/1d4e-ta45
title: VM-packed Malware

description: This research utilizes real-world malware samples that are reinforced with the latest VM-based packers and digitally signed to ensure runtime execution. For academic research purposes only, these packed malware samples are provided as running instances to facilitate behavioral, forensic and detection analysis. Users are forewarned on the potential risks of executing unknown malicious programs, and should refrain from installing or propagating these files outside of a controlled experimental environment. By analyzing this up-to-date corpus of packed malware with state-of-the-art obfuscation, we aim to spur future research and developments in malware evasion tactics as well as the corresponding analysis techniques and countermeasures. The samples reflect an evolving malware landscape that demands more robust and generalized solutions. We caution users against irresponsible uses of these specimens, and advocate solely for an educational and investigative role under safe containment procedures.
DOI: 10.6084/m9.figshare.18258494
title: Realizing topological edge states with Rydberg-atom synthetic dimensions: Datasets

description: This zip file contains the datasets presented in the paper titled "Realizing topological edge states with Rydberg-atom synthetic dimensions". <br>Contains .csv files.
DOI: 10.5281/zenodo.10707154
title: [IO Islamic 3167] قصّۀ محمّد حنيف

description: Ḳiṣṣa-i-Muḥammad-Ḥanîf

This manuscript is now IO Islamic 1592 in the India Office collections.

[metadata: Hermann Ethé, Catalogue of Persian Manuscripts in the Library of the India Office, 2 vols. (Oxford: India Office, 1903): volume 1, number 3167 here with notations and hyperlinks].


1592

Ḳiṣṣa-i-Muḥammad Ḥanîf (قصّۀ محمّد حنيف).

A Persian romance on the warlike exploits of Muḥammad Ḥanîf (or as he is invariably called here, to suit the metre, Muḥammad Ḥanfiyah, see for instance, fol. 3a, l. 7; fol. 5a, l. 1; fol. 10b, l. 3; fol. 16b, l. 1, etc.), the third son of ‘Alî (comp. fol. 5a, l. 1: محمّد حنفيه فرزند حيدر), by Muḥammad ‘Âshiḳ (see the poet’s name on fol.137b,l. 5), who is probably identical with Shaikh Nûr-aldîn Muḥammad ‘Âshiḳ, the author of the mathnawî عيش و طرب , composed A.H. 1079 (A.D. 1668, 1669), see A. Sprenger, Catal., p. 339 and comp. W. Pertsch, Berlin Cat., p. 923. At the end of this poem the great Shaikh Zain-al’âbidîn, properly called Shaikh Ṣadr-aldîn, is praised (see fol. 137b, l. 9 sq.), and we may perhaps identify this Shaikh with the well-known Mullâ Ṣadr-aldîn Muḥammad bin Ibrâhîm Shîrâzî, commonly called Mullâ Ṣadrâ, who died A.H. 1050 (A.D. 1640, 1641), see Rieu ii. p. 829a. This Persian romance, which is undoubtedly the original and prototype of a mathnawî in Dakhnî verses styled ظفرنامه or جنگنامه or جنگنامۀ محمّد حنيف, composed A.H. 1095 (A.D. 1684), by a poet with the takhalluṣ Laṭîf and the epithet Miftâḥ-al’âshiḳîn, who, in a note on fol. 1a of No. 3036 of the India Office Collection, has been identified with Ghulâm ‘Alî, and dedicated his poem to Abû-alḥasan Ḳuṭbshâh who, succeeding ‘Abdallâh Ḳuṭbshâh ascended the throne of Gulkundah in Ḥaidarâbâd, A.H. 1083 (A.D. 1672), and was taken prisoner by Âlamgîr, A.H. 1098 (A.D. 1687). A shorter redaction of the same Dakhnî version is preserved in No. 2721 of the India Office Collection.

Beginning of ‘Âshiḳ’s mathnawî, on fol. 1b:

سر نامه كنم نام خدائى

كه نتوان گفتنش چون و چرائى

It is slightly defective, owing to a lacuna on fol. 134b (fol. 135 is entirely left blank) and a few missing verses at the end.

Modern transcript of the present century, without any date.

No. 3167, ff. 139, 2 coll., each ll. 13; Nasta’lîḳ; size, 85/8 in. by 6¼ in.
DOI: 10.5281/zenodo.10707155
title: [IO Islamic 3167] قصّۀ محمّد حنيف

description: Ḳiṣṣa-i-Muḥammad-Ḥanîf

This manuscript is now IO Islamic 1592 in the India Office collections.

[metadata: Hermann Ethé, Catalogue of Persian Manuscripts in the Library of the India Office, 2 vols. (Oxford: India Office, 1903): volume 1, number 3167 here with notations and hyperlinks].


1592

Ḳiṣṣa-i-Muḥammad Ḥanîf (قصّۀ محمّد حنيف).

A Persian romance on the warlike exploits of Muḥammad Ḥanîf (or as he is invariably called here, to suit the metre, Muḥammad Ḥanfiyah, see for instance, fol. 3a, l. 7; fol. 5a, l. 1; fol. 10b, l. 3; fol. 16b, l. 1, etc.), the third son of ‘Alî (comp. fol. 5a, l. 1: محمّد حنفيه فرزند حيدر), by Muḥammad ‘Âshiḳ (see the poet’s name on fol.137b,l. 5), who is probably identical with Shaikh Nûr-aldîn Muḥammad ‘Âshiḳ, the author of the mathnawî عيش و طرب , composed A.H. 1079 (A.D. 1668, 1669), see A. Sprenger, Catal., p. 339 and comp. W. Pertsch, Berlin Cat., p. 923. At the end of this poem the great Shaikh Zain-al’âbidîn, properly called Shaikh Ṣadr-aldîn, is praised (see fol. 137b, l. 9 sq.), and we may perhaps identify this Shaikh with the well-known Mullâ Ṣadr-aldîn Muḥammad bin Ibrâhîm Shîrâzî, commonly called Mullâ Ṣadrâ, who died A.H. 1050 (A.D. 1640, 1641), see Rieu ii. p. 829a. This Persian romance, which is undoubtedly the original and prototype of a mathnawî in Dakhnî verses styled ظفرنامه or جنگنامه or جنگنامۀ محمّد حنيف, composed A.H. 1095 (A.D. 1684), by a poet with the takhalluṣ Laṭîf and the epithet Miftâḥ-al’âshiḳîn, who, in a note on fol. 1a of No. 3036 of the India Office Collection, has been identified with Ghulâm ‘Alî, and dedicated his poem to Abû-alḥasan Ḳuṭbshâh who, succeeding ‘Abdallâh Ḳuṭbshâh ascended the throne of Gulkundah in Ḥaidarâbâd, A.H. 1083 (A.D. 1672), and was taken prisoner by Âlamgîr, A.H. 1098 (A.D. 1687). A shorter redaction of the same Dakhnî version is preserved in No. 2721 of the India Office Collection.

Beginning of ‘Âshiḳ’s mathnawî, on fol. 1b:

سر نامه كنم نام خدائى

كه نتوان گفتنش چون و چرائى

It is slightly defective, owing to a lacuna on fol. 134b (fol. 135 is entirely left blank) and a few missing verses at the end.

Modern transcript of the present century, without any date.

No. 3167, ff. 139, 2 coll., each ll. 13; Nasta’lîḳ; size, 85/8 in. by 6¼ in.
DOI: 10.6084/m9.figshare.11967030
title: Additional file 1 of Microecological Koch’s postulates reveal that intestinal microbiota dysbiosis contributes to shrimp white feces syndrome

description: Additional file 1. Supplementary Tables S1-S10.
DOI: 10.6084/m9.figshare.11967030.v1
title: Additional file 1 of Microecological Koch’s postulates reveal that intestinal microbiota dysbiosis contributes to shrimp white feces syndrome

description: Additional file 1. Supplementary Tables S1-S10.
DOI: 10.6084/m9.figshare.11967045
title: Additional file 10 of Fine-mapping and transcriptome analysis of a candidate gene controlling plant height in Brassica napus L.

description: Additional file 10: Table S9. The 118 differentially expressed genes clustered in plant hormone-related signal transduction pathways.
DOI: 10.6084/m9.figshare.11967045.v1
title: Additional file 10 of Fine-mapping and transcriptome analysis of a candidate gene controlling plant height in Brassica napus L.

description: Additional file 10: Table S9. The 118 differentially expressed genes clustered in plant hormone-related signal transduction pathways.
DOI: 10.6084/m9.figshare.11967060
title: Additional file 1 of Fine-mapping and transcriptome analysis of a candidate gene controlling plant height in Brassica napus L.

description: Additional file 1: Table S1. The phenotypic values of seed oil content and seed fatty acid concentrations for the NY18, df59 and the F1.
DOI: 10.6084/m9.figshare.11967051
title: Additional file 11 of Fine-mapping and transcriptome analysis of a candidate gene controlling plant height in Brassica napus L.

description: Additional file 11: Genes on the mapped 120.87 kb interval of “Darmor-bzh”, “Ningyou 7” and “Zhongshuang 11” reference genomes and their expression pattern.
DOI: 10.6084/m9.figshare.11967060.v1
title: Additional file 1 of Fine-mapping and transcriptome analysis of a candidate gene controlling plant height in Brassica napus L.

description: Additional file 1: Table S1. The phenotypic values of seed oil content and seed fatty acid concentrations for the NY18, df59 and the F1.
DOI: 10.6084/m9.figshare.11967051.v1
title: Additional file 11 of Fine-mapping and transcriptome analysis of a candidate gene controlling plant height in Brassica napus L.

description: Additional file 11: Genes on the mapped 120.87 kb interval of “Darmor-bzh”, “Ningyou 7” and “Zhongshuang 11” reference genomes and their expression pattern.
DOI: 10.5281/zenodo.10587332
title: Linked collectors and determiners for: Fungi collection of the Botanical Museum of the University of Oulu.

description: Natural history specimen data linked to collectors and determiners held within, "Fungi collection of the Botanical Museum of the University of Oulu". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/9d8ff248-3f6d-4180-a7f5-3570c489cf72 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/9d8ff248-3f6d-4180-a7f5-3570c489cf72. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10587333
title: Linked collectors and determiners for: Fungi collection of the Botanical Museum of the University of Oulu.

description: Natural history specimen data linked to collectors and determiners held within, "Fungi collection of the Botanical Museum of the University of Oulu". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/9d8ff248-3f6d-4180-a7f5-3570c489cf72 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/9d8ff248-3f6d-4180-a7f5-3570c489cf72. Formatted as a Frictionless Data package.
DOI: 10.5281/zenodo.10707203
title: Linked collectors and determiners for: Fungi collection of the Botanical Museum of the University of Oulu.

description: Natural history specimen data linked to collectors and determiners held within, "Fungi collection of the Botanical Museum of the University of Oulu". Claims or attributions were made on Bionomia by volunteer Scribes, https://bionomia.net/dataset/9d8ff248-3f6d-4180-a7f5-3570c489cf72 using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, https://gbif.org/dataset/9d8ff248-3f6d-4180-a7f5-3570c489cf72. Formatted as a Frictionless Data package.