cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24531097
title: Data obtained from reanalysis of RNA sequencing data from drought-stressed roots and salinity-stressed leaves of pearl millet

description: Reads from previous RNA sequencing with drought-stressed roots and salinity-stressed leaves of pearl millet (NCBI SRA accession numbers SRP125789 and SRP128956, respectively) were analyzed as given below. The data derived from this analysis are available here.The reads were mapped to the reference pearl millet genome BWA (MEM). Reads mapped for each gene were counted by featureCounts. Differentially expressed genes (DEGs) were detected by either DESeq2 or a custom script. Either 500-b or 1000-b promoter sequences of pearl millet were prepared by processing their 5000-b promoter sequences downloaded from TGIF-DB (https://webpark2116.sakura.ne.jp/rlgpr/). Motifs enriched in these 500-b and 1000-b promoter sequences of the above DEGs were detected by Homer. The custom script used can be provided upon request.
DOI: 10.6084/m9.figshare.24531097.v1
title: Data obtained from reanalysis of RNA sequencing data from drought-stressed roots and salinity-stressed leaves of pearl millet

description: Reads from previous RNA sequencing with drought-stressed roots and salinity-stressed leaves of pearl millet (NCBI SRA accession numbers SRP125789 and SRP128956, respectively) were analyzed as given below. The data derived from this analysis are available here.The reads were mapped to the reference pearl millet genome BWA (MEM). Reads mapped for each gene were counted by featureCounts. Differentially expressed genes (DEGs) were detected by either DESeq2 or a custom script. Either 500-b or 1000-b promoter sequences of pearl millet were prepared by processing their 5000-b promoter sequences downloaded from TGIF-DB (https://webpark2116.sakura.ne.jp/rlgpr/). Motifs enriched in these 500-b and 1000-b promoter sequences of the above DEGs were detected by Homer. The custom script used can be provided upon request.
DOI: 10.5517/ccdc.csd.cc2flnb1
title: CCDC 2252253: Experimental Crystal Structure Determination

description: Related Article: Alexander C. Marwitz, Aaron D. Nicholas, Rajani Thapa Magar, Anuj K. Dutta, Joel Swanson, Tyler Hartman, Jeffery A. Bertke, Jeffrey J. Rack, Luiz G. Jacobsohn, Karah E. Knope|2023|J.Mater.Chem.C|11|14848|doi:10.1039/D3TC02040A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2flnf4
title: CCDC 2252256: Experimental Crystal Structure Determination

description: Related Article: Alexander C. Marwitz, Aaron D. Nicholas, Rajani Thapa Magar, Anuj K. Dutta, Joel Swanson, Tyler Hartman, Jeffery A. Bertke, Jeffrey J. Rack, Luiz G. Jacobsohn, Karah E. Knope|2023|J.Mater.Chem.C|11|14848|doi:10.1039/D3TC02040A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2flnc2
title: CCDC 2252254: Experimental Crystal Structure Determination

description: Related Article: Alexander C. Marwitz, Aaron D. Nicholas, Rajani Thapa Magar, Anuj K. Dutta, Joel Swanson, Tyler Hartman, Jeffery A. Bertke, Jeffrey J. Rack, Luiz G. Jacobsohn, Karah E. Knope|2023|J.Mater.Chem.C|11|14848|doi:10.1039/D3TC02040A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2flnd3
title: CCDC 2252255: Experimental Crystal Structure Determination

description: Related Article: Alexander C. Marwitz, Aaron D. Nicholas, Rajani Thapa Magar, Anuj K. Dutta, Joel Swanson, Tyler Hartman, Jeffery A. Bertke, Jeffrey J. Rack, Luiz G. Jacobsohn, Karah E. Knope|2023|J.Mater.Chem.C|11|14848|doi:10.1039/D3TC02040A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gzxr4
title: CCDC 2293837: Experimental Crystal Structure Determination

description: Related Article: Jan Adamek, Paulina H. Marek-Urban, Krzysztof Woźniak, Krzysztof Durka, Sergiusz Luliński|2023|Chemical Science|14|12133|doi:10.1039/D3SC03876A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fln90
title: CCDC 2252252: Experimental Crystal Structure Determination

description: Related Article: Alexander C. Marwitz, Aaron D. Nicholas, Rajani Thapa Magar, Anuj K. Dutta, Joel Swanson, Tyler Hartman, Jeffery A. Bertke, Jeffrey J. Rack, Luiz G. Jacobsohn, Karah E. Knope|2023|J.Mater.Chem.C|11|14848|doi:10.1039/D3TC02040A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f0rpx
title: CCDC 2235059: Experimental Crystal Structure Determination

description: Related Article: Rebekah N. Duffin, Philip C. Andrews|2023|Dalton Trans.|52|15848|doi:10.1039/D3DT02542J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f0rqy
title: CCDC 2235060: Experimental Crystal Structure Determination

description: Related Article: Rebekah N. Duffin, Philip C. Andrews|2023|Dalton Trans.|52|15848|doi:10.1039/D3DT02542J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g7y9z
title: CCDC 2271751: Experimental Crystal Structure Determination

description: Related Article: Wenxing Zou, Kristian L. Mears, James C. Fettinger, Philip P. Power|2023|Chem.Commun.|59|13203|doi:10.1039/D3CC04014C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc249pdk
title: CCDC 1975518: Experimental Crystal Structure Determination

description: Related Article: Yang Liu, Yitao Wu|2023|New J.Chem.|47|19746|doi:10.1039/D3NJ03837H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc23pg8k
title: CCDC 1957038: Experimental Crystal Structure Determination

description: Related Article: Sourav Ranjan Pradhan, M. Murugavel, Sangya Chitranshi, Gakhyun Kim, Dongho Kim, Mainak Das, A. Srinivasan|2023|New J.Chem.|47|19987|doi:10.1039/D3NJ03432A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2clbr2
title: CCDC 2192374: Experimental Crystal Structure Determination

description: Related Article: Rahul Kumar Singh, Dibya Yadav, Shilpi Misra, Amrendra K. Singh|2023|Dalton Trans.|52|15878|doi:10.1039/D3DT03149G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2clbs3
title: CCDC 2192375: Experimental Crystal Structure Determination

description: Related Article: Rahul Kumar Singh, Dibya Yadav, Shilpi Misra, Amrendra K. Singh|2023|Dalton Trans.|52|15878|doi:10.1039/D3DT03149G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h57yw
title: CCDC 2298958: Experimental Crystal Structure Determination

description: Related Article: E. Irrou, Y. Ait Elmachkouri, A. Mazzah, T. Hökelek, A. Haoudi, J.T. Mague, M.L. Taha, N.K. Sebbar|2023|Acta Crystallogr.,Sect.E:Cryst.Commun.|79|1037|doi:10.1107/S205698902300868X
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gknrg
title: CCDC 2281096: Experimental Crystal Structure Determination

description: Related Article: Gina Stuhrmann, Jannik Schneider, Kilian Schmidt, Stefanie Dehnen|2023|Chem.Commun.|59|13171|doi:10.1039/D3CC03525E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gknsh
title: CCDC 2281097: Experimental Crystal Structure Determination

description: Related Article: Gina Stuhrmann, Jannik Schneider, Kilian Schmidt, Stefanie Dehnen|2023|Chem.Commun.|59|13171|doi:10.1039/D3CC03525E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gkntj
title: CCDC 2281098: Experimental Crystal Structure Determination

description: Related Article: Gina Stuhrmann, Jannik Schneider, Kilian Schmidt, Stefanie Dehnen|2023|Chem.Commun.|59|13171|doi:10.1039/D3CC03525E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10086735
title: Digitization of Musu Rma data in Liu 1985

description: This is a dataset that has been digitized from Liu 1985. The data are Liu's transcriptions of Rma/Qiang words in the Musu variety of Heishui County, SIchuan China. 
This dataset includes the original transcription system which was not standard IPA due to type-setting. It also includes a version of the data in standardized IPA, as well as the Chinese glosses given by Liu. 
Liu, Huiqiang. 1985. Musu Qiang Phonology [Qiangyu Musuhua Yinxi]. Qiang Studies 110– 118.
DOI: 10.5281/zenodo.10086736
title: Digitization of Musu Rma data in Liu 1985

description: This is a dataset that has been digitized from Liu 1985. The data are Liu's transcriptions of Rma/Qiang words in the Musu variety of Heishui County, SIchuan China. 
This dataset includes the original transcription system which was not standard IPA due to type-setting. It also includes a version of the data in standardized IPA, as well as the Chinese glosses given by Liu. 
Liu, Huiqiang. 1985. Musu Qiang Phonology [Qiangyu Musuhua Yinxi]. Qiang Studies 110– 118.
DOI: 10.5281/zenodo.10041769
title: Test_Data_Bandung
DOI: 10.5281/zenodo.10041770
title: Test_Data_Bandung
DOI: 10.5281/zenodo.10068212
title: The simulated data

description: Simulated data
DOI: 10.5281/zenodo.10068211
title: The simulated data

description: Simulated data
DOI: 10.5281/zenodo.10086809
title: DevGPT: Studying Developer-ChatGPT Conversations

description: DevGPT is a curated dataset which encompasses 17,913 prompts and ChatGPT's responses including 11,751 code snippets, coupled with the corresponding software development artifacts—ranging from source code, commits, issues, pull requests, to discussions and Hacker News threads—to enable the analysis of the context and implications of these developer interactions with ChatGPT.
ImportantVersion 9 (2023-11-09) resolves the empty list of conversations attribute: https://github.com/NAIST-SE/DevGPT/issues/8
DOI: 10.5281/zenodo.8248511
title: DevGPT: Studying Developer-ChatGPT Conversations

description: DevGPT is a curated dataset which encompasses 16,129 prompts and ChatGPT's responses including 9,785 code snippets, coupled with the corresponding software development artifacts—ranging from source code, commits, issues, pull requests, to discussions and Hacker News threads—to enable the analysis of the context and implications of these developer interactions with ChatGPT.
DOI: 10.5281/zenodo.8303722
title: DevGPT: Studying Developer-ChatGPT Conversations

description: DevGPT is a curated dataset which encompasses 17,913 prompts and ChatGPT's responses including 11,751 code snippets, coupled with the corresponding software development artifacts—ranging from source code, commits, issues, pull requests, to discussions and Hacker News threads—to enable the analysis of the context and implications of these developer interactions with ChatGPT.
DOI: 10.5281/zenodo.8343454
title: DevGPT: Studying Developer-ChatGPT Conversations

description: DevGPT is a curated dataset which encompasses 17,913 prompts and ChatGPT's responses including 11,751 code snippets, coupled with the corresponding software development artifacts—ranging from source code, commits, issues, pull requests, to discussions and Hacker News threads—to enable the analysis of the context and implications of these developer interactions with ChatGPT.
DOI: 10.5281/zenodo.8436454
title: DevGPT: Studying Developer-ChatGPT Conversations

description: DevGPT is a curated dataset which encompasses 17,913 prompts and ChatGPT's responses including 11,751 code snippets, coupled with the corresponding software development artifacts—ranging from source code, commits, issues, pull requests, to discussions and Hacker News threads—to enable the analysis of the context and implications of these developer interactions with ChatGPT.
DOI: 10.5281/zenodo.10009967
title: DevGPT: Studying Developer-ChatGPT Conversations

description: DevGPT is a curated dataset which encompasses 17,913 prompts and ChatGPT's responses including 11,751 code snippets, coupled with the corresponding software development artifacts—ranging from source code, commits, issues, pull requests, to discussions and Hacker News threads—to enable the analysis of the context and implications of these developer interactions with ChatGPT.
DOI: 10.5281/zenodo.8242142
title: DevGPT: Studying Developer Conversations with ChatGPT

description: DevGPT is a curated dataset which encompasses 16,129 prompts and ChatGPT's responses including 9,785 code snippets, coupled with the corresponding software development artifacts—ranging from source code, commits, issues, pull requests, to discussions and Hacker News threads—to enable the analysis of the context and implications of these developer interactions with ChatGPT.
DOI: 10.5281/zenodo.8303253
title: DevGPT: Studying Developer-ChatGPT Conversations

description: DevGPT is a curated dataset which encompasses 17,913 prompts and ChatGPT's responses including 11,751 code snippets, coupled with the corresponding software development artifacts—ranging from source code, commits, issues, pull requests, to discussions and Hacker News threads—to enable the analysis of the context and implications of these developer interactions with ChatGPT.
DOI: 10.5281/zenodo.8336557
title: DevGPT: Studying Developer-ChatGPT Conversations

description: DevGPT is a curated dataset which encompasses 17,913 prompts and ChatGPT's responses including 11,751 code snippets, coupled with the corresponding software development artifacts—ranging from source code, commits, issues, pull requests, to discussions and Hacker News threads—to enable the analysis of the context and implications of these developer interactions with ChatGPT.
DOI: 10.34740/kaggle/dsv/6925107
title: WallStreetBets 2022
DOI: 10.5281/zenodo.10084465
title: Gridded HONO emission inventory in mainland China

description: We produce and provide a HONO emission inventory in mainland China in 2016. The emission inventory have been developed with 1/12 by 1/12 degree spatial resolution. The unit of the emission inventory is t/grid/year.
DOI: 10.5281/zenodo.10084466
title: Gridded HONO emission inventory in mainland China

description: We produce and provide a HONO emission inventory in mainland China in 2016. The emission inventory have been developed with 1/12 by 1/12 degree spatial resolution. The unit of the emission inventory is t/grid/year.
DOI: 10.5281/zenodo.10086811
title: Xiaoxing Rma/Qiang forms from Huang et al. 2019

description: This is a small subset of the published data on Xiaoxing Qiang/Rma language data from Huang et al. 2019. 
Huang, Chenglong, Baofeng Wang, Mingjun Mao & Xi Zhang. 2019. Sichuan Songpan Qiangyu Zhongguo binwei yuyan zhi. Shaoshu minzu yuyan xilie. Beijing: Shangwu yinshuguan. 
These forms were gathered together in order to perform basic measurements of pitch in a study of word-prosody in Rma varieties. Huang et al. 2019 made the recordings and the IPA transcriptions. The text grids and the R code are original.
DOI: 10.5281/zenodo.10086812
title: Xiaoxing Rma/Qiang forms from Huang et al. 2019

description: This is a small subset of the published data on Xiaoxing Qiang/Rma language data from Huang et al. 2019. 
Huang, Chenglong, Baofeng Wang, Mingjun Mao & Xi Zhang. 2019. Sichuan Songpan Qiangyu Zhongguo binwei yuyan zhi. Shaoshu minzu yuyan xilie. Beijing: Shangwu yinshuguan. 
These forms were gathered together in order to perform basic measurements of pitch in a study of word-prosody in Rma varieties. Huang et al. 2019 made the recordings and the IPA transcriptions. The text grids and the R code are original.
DOI: 10.25345/c5p26qf06
title: MassIVE MSV000093340 - LARP4 Is an RNA-Binding Protein That Binds Nuclear-Encoded Mitochondrial mRNAs To Promote Mitochondrial Function
title: Mitochondria-associated RNA-binding proteins have emerged as key contributors to mitochondrial biogenesis and homeostasis. With few examples known, we set out to identify RBPs that regulate nuclear-encoded mitochondrial mRNAs. Our systematic analysis of RNA targets of 150 RBPs identified RBPs with a preference for binding NEM mRNAs, including LARP4, a La RBP family member. We show that LARP4s targets are particularly enriched in mRNAs that encode respiratory chain complex proteins and mitochondrial ribosome proteins across multiple human cell lines. Through quantitative proteomics, we demonstrate that depletion of LARP4 leads to a significant reduction in RCCP and MRP protein levels. Furthermore, we show that LARP4 depletion reduces mitochondrial function, and that LARP4 re-expression rescues this phenotype. Our findings shed light on a novel function for LARP4 as an RBP that binds to and positively regulates NEM mRNAs to promote mitochondrial respiratory function.
DOI: 10.6084/m9.figshare.23909025
title: 5,029 strain level MAGs of FMGC

description: 5,029 strain level MAGs constructed by this study. Please download all of the parts and de-compress them together.
DOI: 10.6084/m9.figshare.23909025.v1
title: 5,029 strain level MAGs of FMGC

description: 5,029 strain level MAGs constructed by this study.
DOI: 10.6084/m9.figshare.23909025.v2
title: 5,029 strain level MAGs of FMGC

description: 5,029 strain level MAGs constructed by this study. Please download all of the parts and de-compress them together.
DOI: 10.5281/zenodo.10086868
title: Cites received by Brazilian Journal of Information Science: research trends (BRAJIS)

description: Dataset with the data of the paper "BRAJIS en WOS: impacto observado y visibilidad global"
DOI: 10.5281/zenodo.10086867
title: Cites received by Brazilian Journal of Information Science: research trends (BRAJIS)

description: Dataset with the data of the paper "BRAJIS en WOS: impacto observado y visibilidad global"
DOI: 10.6073/pasta/2cd6628a942de2a8b12d2b19962712a0
title: Dissolved oxygen, temperature, chlorophyll-a, total phosphorus, total nitrogen, and dissolved organic carbon at multiple depths in 822 lakes from 1921-2022

description: Rapid changes in climate and land use are having substantial and interacting impacts on lake water quality around the world. Here, we synthesized time-series data for dissolved oxygen, temperature, chlorophyll-a, total phosphorus, total nitrogen, and dissolved organic carbon at multiple depths in 822 lakes to facilitate analyses of these changes. The dataset extends from 1921–2022, with a median data duration of 29 years (range 5-102) and a median of 5 unique sampling dates per year at each lake. Lakes in the dataset have a median depth of 12.5 m (range 1.5–480 m), median surface area of 85.4 ha (range: 0.5–237000 ha) and median elevation of 264 m (range: -215–2804). The lakes are located in 18 countries across 5 continents, with latitudes ranging from -42.6 to 68.3. To facilitate interoperability with other large-scale datasets, each lake is linked to a unique hydroLAKES lake ID when possible (n = 683).