cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25573/data.22096610
title: Annotations for ‘akiapōlā‘au and Hawai‘i ‘amakihi genomes

description: This repository provides the annotations and genome assemblies generated in Campana et al. (2020). The de novo ‘akiapōlā‘au assembly is provided in file Aki.fa.gz, with its gene predictions in Aki_augustus_all.gff.gz. The Augustus predictions for the Callicrate et al. (2014) Hawai‘i ‘amakihi genome is given Ama_v1_augustus_all.gff.gz. The ‘akiapōlā‘au-realigned Hawai‘i ‘amakihi consensus sequence and gene predictions are in Ama_v2.fa.gz and Ama_v2_augustus_all.gff.gz respectively. Predicted protein sequences for these annotations are in the files with "_proteins.faa.gz" appended to the end. The InterProScan predictions for the three datasets are provided in the InterProScan-5.33-72.0.tgz file.
DOI: 10.25573/data.22096610.v2
title: Annotations for ‘akiapōlā‘au and Hawai‘i ‘amakihi genomes

description: This repository provides the annotations and genome assemblies generated in Campana et al. (2020). The de novo ‘akiapōlā‘au assembly is provided in file Aki.fa.gz, with its gene predictions in Aki_augustus_all.gff.gz. The Augustus predictions for the Callicrate et al. (2014) Hawai‘i ‘amakihi genome is given Ama_v1_augustus_all.gff.gz. The ‘akiapōlā‘au-realigned Hawai‘i ‘amakihi consensus sequence and gene predictions are in Ama_v2.fa.gz and Ama_v2_augustus_all.gff.gz respectively. Predicted protein sequences for these annotations are in the files with "_proteins.faa.gz" appended to the end. The InterProScan predictions for the three datasets are provided in the InterProScan-5.33-72.0.tgz file.
DOI: 10.25573/data.22096610.v1
title: Annotations for ‘akiapōlā‘au and Hawai‘i ‘amakihi genomes

description: This repository provides the annotations and genome assemblies generated in Campana et al. (2020). The de novo ‘akiapōlā‘au assembly is provided in file Aki.fa.gz, with its gene predictions in Aki_augustus_all.gff.gz. The Augustus predictions for the Callicrate et al. (2014) Hawai‘i ‘amakihi genome is given Ama_v1_augustus_all.gff.gz. The ‘akiapōlā‘au-realigned Hawai‘i ‘amakihi consensus sequence and gene predictions are in Ama_v2.fa.gz and Ama_v2_augustus_all.gff.gz respectively. The InterProScan predictions for the three datasets are provided in the InterProScan-5.33-72.0.tgz file.
DOI: 10.5683/sp2/qt6anb
title: LAPOP: United States 2010

description: The Latin American Public Opinion Project (LAPOP) is an academic institution hosted by Vanderbilt University that began with the study of democratic values in Costa Rica, but today carries out surveys in much of Latin America, Canada, the United States, and the Caribbean. In 2004, LAPOP established the AmericasBarometer as multi-country, regularly conducted survey of democratic values and behaviors in the Americas, and the first round included voting-age respondents from 11 countries. LAPOP collected opinions on major problems facing the country and community, threats to security, attitudes towards the country's political system, and trust in government institutions. Also measured were respondents' participation in community organizations, attitudes towards government critics, voting behavior, confidence in local government, and the prevalence of crime. Demographic information collected includes nationality, ethnicity, native language, age, gender, education level, occupation, religion, and whether the respondent lives in an urban or rural area.
DOI: 10.6084/m9.figshare.22354390
title: 2023 Turkey earthquake data

description: Those data are downloaded from website http://tadas.afad.gov.tr.
DOI: 10.6084/m9.figshare.22354390.v1
title: 2023 Turkey earthquake data

description: Those data are downloaded from website http://tadas.afad.gov.tr.
DOI: 10.6084/m9.figshare.22339759.v1
title: Experiment Results - Live Refactoring Environment

description: These items respresent all the results collected from our empirical experiment. Note that all of them were calculated using the file <strong>"data.json"</strong>. File <strong>"Results Test.xlsx"</strong> contains the values measured using the <strong>Shapiro-Wilk Test</strong>, <strong>Spearman Correlation Test</strong>, <strong>Wilcoxon Rank Sum Test</strong>, and <strong>Permutation Test;</strong> File <strong>"Data Charts.xlsx"</strong> contains each metric evolution over time. These metrics and their values were used to assess several charts presented in the paper "<em>The Impact of a Live Refactoring Environment on Software Development: An Empirical Evaluation</em>"; Folder <strong>"Charts"</strong> contains all the previously mentioned charts; File <strong>"Participants Information + Summary.xlsx"</strong> contains the GPA of each group, their respective experimental group, and final project grading schema; File <strong>"Usability + Reliability.xlsx"</strong> contains the answers to questions about the participants' characterization, experience evaluation, and usability. Through some of those questions we were also able to assess the approach's reliability.
DOI: 10.6084/m9.figshare.21610215
title: Data supporting conclusions in Palucis et al. (2023) GSA Bull.: The runoff required to drive post-impact gully development on the walls of Meteor Crater (Arizona, USA)

description: Tables containing data about the cosmogenic radionuclide dating of levee deposits on the floor of the crater (Table 1), morphology data regarding the gullies carved into the crater wall (Table 2), estimated volumes of material eroded from the crater wall and rim and deposited on its floor and lower walls (Table 3) and channel and flow data from our hydrologic analysis (Table 4).
DOI: 10.6084/m9.figshare.21610215.v1
title: Data supporting conclusions in Palucis et al. (submitted) - The runoff required to drive post-impact gully development on the walls of Meteor Crater (Arizona, USA)

description: Tables containing data about the cosmogenic radionuclide dating of levee deposits on the floor of the crater (Table 1), morphology data regarding the gullies carved into the crater wall (Table 2), estimated volumes of material eroded from the crater wall and rim and deposited on its floor and lower walls (Table 3) and channel and flow data from our hydrologic analysis (Table 4).
DOI: 10.7298/jeme-ht63
title: Surveillance Optimization Project for Chronic Wasting Disease dataset for Kentucky, US, 2017-2021
DOI: 10.5683/sp2/4duata
title: LAPOP: Venezuela 2007

description: The Latin American Public Opinion Project (LAPOP) is an academic institution hosted by Vanderbilt University that began with the study of democratic values in Costa Rica, but today carries out surveys in much of Latin America, Canada, the United States, and the Caribbean. In 2004, LAPOP established the AmericasBarometer as multi-country, regularly conducted survey of democratic values and behaviors in the Americas, and the first round included voting-age respondents from 11 countries. LAPOP collected opinions on major problems facing the country and community, threats to security, attitudes towards the country's political system, and trust in government institutions. Also measured were respondents' participation in community organizations, attitudes towards government critics, voting behavior, confidence in local government, and the prevalence of crime. Demographic information collected includes nationality, ethnicity, native language, age, gender, education level, occupation, religion, and whether the respondent lives in an urban or rural area.
DOI: 10.17862/cranfield.rd.16673875.v3
title: Aircraft Passenger Cabin Stakeholders & Design Drivers - A Holistic NPDI Framework

description: The presented toolset defines the stakeholders involved in aircraft passenger cabin interior development projects, and their pursued design drivers. - Stakeholder Definition sheet presents all types of organisations involved in the design of aircraft cabin interiors, disregarding of the involvement extent. - Stakeholder Analysis sheet contains the pairwise comparison matrices for all stakeholders along the influence and interest axes, and the resulting plot. - Cabin Design Drivers sheet contains the definition of drivers pursued by the cabin interior projects. These are defined as a multi-level structure including: -- Top-level profitability-based design drivers, -- Their constituent factors representing the design considerations and themes, and -- Bottom-level design criteria representing the detailed product specifications, requirements, features, qualities, performance targets etc. - Design Factor Weights present a set of pairwise comparison matrices for deriving the relative importance weights at the factor and driver levels. - R Input sheet contains R code template to use with R Studio software to retrieve Eigenvector values. - Design Factors Map sheet contains factor applicability mapping to represent stakeholder concern and interaction points on a cabin interior project. - Cabin Product Breakdown sheet presents the composition of state-of-the-art cabin interiors by listing out the components it may have. The presented list is an all-encompassing version and does not represent the product line of any specific cabin manufacturer or equipment supplier. The presented sheets may be used as information source, or be amended to reflect the needs of their specific project. Amendments may be performed in the white cells of the pairwise comparison matrices on Stakeholder Analysis and Design Factor Weights; and applicability indicators in Design Factors Map and Cabin Product Breakdown sheets.
DOI: 10.6084/m9.figshare.22350559
title: Effects of cold water and aridity on Baja California mangrove survival and ecophysiological traits

description: Bardou et al. mangrove experiment manipulating water temperature and aridity. We examine growth, survival, and ecophysiological traits or three mangrove species (<em>Rhizophora mangle</em>, <em>Laguncularia racemose</em>, and <em>Avicennia germinans</em>)
DOI: 10.6084/m9.figshare.22350559.v1
title: Effects of cold water and aridity on Baja California mangrove survival and ecophysiological traits

description: Bardou et al. mangrove experiment manipulating water temperature and aridity. We examine growth, survival, and ecophysiological traits or three mangrove species (<em>Rhizophora mangle</em>, <em>Laguncularia racemose</em>, and <em>Avicennia germinans</em>)
DOI: 10.5683/sp2/n2qhcj
title: LAPOP: Venezuela 2008

description: The Latin American Public Opinion Project (LAPOP) is an academic institution hosted by Vanderbilt University that began with the study of democratic values in Costa Rica, but today carries out surveys in much of Latin America, Canada, the United States, and the Caribbean. In 2004, LAPOP established the AmericasBarometer as multi-country, regularly conducted survey of democratic values and behaviors in the Americas, and the first round included voting-age respondents from 11 countries. LAPOP collected opinions on major problems facing the country and community, threats to security, attitudes towards the country's political system, and trust in government institutions. Also measured were respondents' participation in community organizations, attitudes towards government critics, voting behavior, confidence in local government, and the prevalence of crime. Demographic information collected includes nationality, ethnicity, native language, age, gender, education level, occupation, religion, and whether the respondent lives in an urban or rural area.
DOI: 10.7298/h8cc-fx46
title: Surveillance Optimization Project for Chronic Wasting Disease dataset for Arkansas, US, 2001-2021
DOI: 10.7298/e3rz-em42
title: Surveillance Optimization Project for Chronic Wasting Disease dataset for Florida, US, 2016-2021
DOI: 10.7298/v6bs-8t21
title: Surveillance Optimization Project for Chronic Wasting Disease dataset for Georgia, US, 2018-2021
DOI: 10.7298/m189-7w67
title: Surveillance Optimization Project for Chronic Wasting Disease dataset for Iowa, US, 2002-2020
DOI: 10.5683/sp2/6ci83k
title: LAPOP: Venezuela 2010

description: The Latin American Public Opinion Project (LAPOP) is an academic institution hosted by Vanderbilt University that began with the study of democratic values in Costa Rica, but today carries out surveys in much of Latin America, Canada, the United States, and the Caribbean. In 2004, LAPOP established the AmericasBarometer as multi-country, regularly conducted survey of democratic values and behaviors in the Americas, and the first round included voting-age respondents from 11 countries. LAPOP collected opinions on major problems facing the country and community, threats to security, attitudes towards the country's political system, and trust in government institutions. Also measured were respondents' participation in community organizations, attitudes towards government critics, voting behavior, confidence in local government, and the prevalence of crime. Demographic information collected includes nationality, ethnicity, native language, age, gender, education level, occupation, religion, and whether the respondent lives in an urban or rural area.
DOI: 10.7298/phvc-mc04
title: Surveillance Optimization Project for Chronic Wasting Disease dataset for Indiana, US, 2017-2021
DOI: 10.5281/zenodo.7782210
title: UDAPDR LoTTE Dev Zeroshot Results

description: ColBERTv2 Zeroshot Results for LoTTE dev set.
DOI: 10.5281/zenodo.7782209
title: UDAPDR LoTTE Dev Zeroshot Results

description: ColBERTv2 Zeroshot Results for LoTTE dev set.
DOI: 10.6084/m9.figshare.22332667
title: Visium

description: <strong>Single-cell data for deconvolution (Visium)</strong>
DOI: 10.17028/rd.lboro.22354744
title: Supplementary information files for Concise synthesis of moracin M using Appel mediated dehydration of a bioinspired endoperoxide

description: Supplementary files for article Concise synthesis of moracin M using Appel mediated dehydration of a bioinspired endoperoxide <br> A synthesis of moracin M using Appel dehydration of a biomimetic inspired endoperoxide and subsequent late stage aromatization, is described. A key 1,3-diene, obtained from a base-free Suzuki-Miyaura coupling, can undergo biomimetic oxidation to its endoperoxide, followed by dehydration under Appel conditions and aromatization to give a benzofuran, with subsequent deprotection then providing moracin M in only 4-steps. Alternatively, this 1,3‑diene can undergo aromatization and subsequent deprotection providing a synthetic route to resveratrol. <br> <br>
DOI: 10.17028/rd.lboro.22354744.v1
title: Supplementary information files for Concise synthesis of moracin M using Appel mediated dehydration of a bioinspired endoperoxide

description: Supplementary files for article Concise synthesis of moracin M using Appel mediated dehydration of a bioinspired endoperoxide <br> A synthesis of moracin M using Appel dehydration of a biomimetic inspired endoperoxide and subsequent late stage aromatization, is described. A key 1,3-diene, obtained from a base-free Suzuki-Miyaura coupling, can undergo biomimetic oxidation to its endoperoxide, followed by dehydration under Appel conditions and aromatization to give a benzofuran, with subsequent deprotection then providing moracin M in only 4-steps. Alternatively, this 1,3‑diene can undergo aromatization and subsequent deprotection providing a synthetic route to resveratrol. <br> <br>
DOI: 10.5281/zenodo.5823387
title: National Wetlands Inventory of the United States - State and Substate Shapefiles

description: Data downloaded from original source at https://www.fws.gov/wetlands/data/State-Downloads.html by State. The data is downloaded as a .zip file that contains the following layers: Wetlands polygon data Wetlands Project Metadata (includes image dates and project information) Wetlands Historic Map Information* Riparian polygon data* Riparian Project Metadata (includes image dates and project information)* Historic Wetlands* Historic Wetlands Project Metadata (includes image dates and project information)* * If available at the requested location. Information about each of these layers can be found on the NWS Metadata page. Detailed documentation of the Cowardin Classification system can be found on the NWS Wetland Code page. There you can also download the NWI Code Definitions Table that provides users with the full wetland or deepwater habitat description within their own mapping application. Please read the Disclaimer, Data Limitations, Exclusions and Precautions, and the Wetlands Geodatabase User Caution.
description: The data are provided as-is. The information provided in the Description was copied from the original source webpage on 2022-01-05. The data were originally downloaded by Leah Brooks (GWU) and uploaded here by Lars Vilhuber (Cornell University).
DOI: 10.5281/zenodo.5823386
title: National Wetlands Inventory of the United States - State and Substate Shapefiles

description: Data downloaded from original source at https://www.fws.gov/wetlands/data/State-Downloads.html by State. The data is downloaded as a .zip file that contains the following layers: Wetlands polygon data Wetlands Project Metadata (includes image dates and project information) Wetlands Historic Map Information* Riparian polygon data* Riparian Project Metadata (includes image dates and project information)* Historic Wetlands* Historic Wetlands Project Metadata (includes image dates and project information)* * If available at the requested location. Information about each of these layers can be found on the NWS Metadata page. Detailed documentation of the Cowardin Classification system can be found on the NWS Wetland Code page. There you can also download the NWI Code Definitions Table that provides users with the full wetland or deepwater habitat description within their own mapping application. Please read the Disclaimer, Data Limitations, Exclusions and Precautions, and the Wetlands Geodatabase User Caution.
description: The data are provided as-is. The information provided in the Description was copied from the original source webpage on 2022-01-05. The data were originally downloaded by Leah Brooks (GWU) and uploaded here by Lars Vilhuber (Cornell University).
DOI: 10.5281/zenodo.5830967
title: USGS National Map 3DEP 1 Arc-second Digital Elevation Models (DEMs): Full Coverage for U.S. Interstate Highway System

description: This is an archive of the USGS National Map 3DEP 1 Arc-second Digital Elevation Models (DEMs). While it should be reasonably complete (provided via DVD by USGS), coverage has only been verified to provide full coverage for the U.S. Interstate Highway System (see notes below). Original description: This is a tiled collection of the 3D Elevation Program (3DEP) and is 1 arc-second (approximately 30 m) resolution.The elevations in this Digital Elevation Model (DEM) represent the topographic bare-earth surface. The 3DEP data holdings serve as the elevation layer of The National Map, and provide foundational elevation information for earth science studies and mapping applications in the United States. [...] The seamless 1 arc-second DEM layers are derived from diverse source data that are processed to a common coordinate system and unit of vertical measure. These data are distributed in geographic coordinates in units of decimal degrees, and in conformance with the North American Datum of 1983 (NAD 83). All elevation values are in meters and, over the continental United States, are referenced to the North American Vertical Datum of 1988 (NAVD88). The seamless 1 arc-second DEM layer provides coverage of the conterminous United States, Hawaii, Puerto Rico, other territorial islands, and much of Alaska and Canada. The seamless 1 arc-second DEM is available as pre-staged products tiled in 1 degree blocks in Erdas .img, ESRI arc-grid, and grid float formats. The seamless 1 arc-second DEM layer is updated continually as new data become available. The archived data here were acquired from two sources: DVD purchased from USGS on (DATE), as per process described in README.pdf The list of files stemming from the DVD are listed in "manifest_USGS_DVD.txt" manual download of missing grid cells from https://apps.nationalmap.gov/downloader/ on (DATE), as per procedure described in README.pdf, files are listed in "manifest_missingrasters.txt"
description: These data were acquired by Leah Brooks (GWU) and uploaded here by Lars Vilhuber (Cornell University). Data are provided as-is, and no claim to completeness is made.
DOI: 10.25345/c5bv7b55p
title: MassIVE MSV000091587 - Querying the In Vitro Proteome Cysteine Reactivity of 8:2 Fluorotelomer Acrylate
title: Despite the phase out of legacy per- and polyfluoroalkyl substances (PFAS), fluorotelomer polymers (FTP) have been used for many applications, notably textile surface coatings. FTPs are of health concerns due to their breakdown into legacy PFAS and the co-occurrence of fluorotelomer acrylate (FTAC) monomers, of which the latter may potentially react with cellular thiols. To investigate these reactions, we employed fluorous-solid phase extraction (FSPE), to enrich peptides covalently modified by 8:2 fluorotelomer acrylate (8:2 FTAC), and coupled it to a modified nano-liquid chromatography method for the identification of in vitro protein adducts using shotgun proteomics. Using this method, over one-hundred unique peptides were detected with 8:2 FTAC modifications, although none of the modified cysteine residues were annotated active site nucleophiles. In parallel, a synthetic C6F13-iodoacetamide (F13-IAM) chemical probe was used to gauge the upper-bound of PFAS-thiol reactivity. Over seven hundred peptides were detected with modifications but only 9 of 28 annotated active site cysteines in this dataset were modified by F13-IAM. Further exploration of the impacts of 8:2 FTAC adducts on protein function revealed that 8:2 FTAC modification promotes protein aggregation in vitro. These results suggest that PFAS may exhibit significant off-target reactivate and suggests a more general mechanisms of toxicity of PFAS induced protein aggregation.
DOI: 10.18739/a2ng4gt2x
title: Eriophorum vaginatum surveys collected by the carbon in arctic tussock tundra network from an array of sites in the Alaskan, Canadian, and Russian Arctic, 2015-2019

description: This data set is associated with Curasi et al., 2022 (https://doi.org/10.1088/1748-9326/ac6005) it includes detailed survey data for Eriophorum vaginatum spanning sites in the Alaskan, Canadian, and Russian Arctic. The data set includes detailed surveys of tussock density and diameter, shrub basal diameter and abundance, the relationship between tussock size and mass, the relationship between shrub size and mass, tussock chemical properties, soil properties, and bulk density. It also includes outputs and projections from a tussock machine learning ecological niche model. This data was collected to characterize the distribution of this foundation species across the landscape and illustrate its role in the ecosystem. The data collection methods and subsequent analysis are described in detail in https://doi.org/10.1088/1748-9326/ac6005
DOI: 10.5281/zenodo.7782281
title: Small and big pot calibration for 5TE and 10HS sensors.

description: This is a dataset of data used to calibrate 10HS and 5TE sensors for soil moisture. It contains information on repetitions measured, transforming data and sample size estimation.
DOI: 10.5281/zenodo.7782280
title: Small and big pot calibration for 5TE and 10HS sensors.

description: This is a dataset of data used to calibrate 10HS and 5TE sensors for soil moisture. It contains information on repetitions measured, transforming data and sample size estimation.
DOI: 10.6084/m9.figshare.22354768
title: R_Individual Fish Totals.csv

description: observation totals for each indivdual fish