cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.c32jg/1
title: Stimuli + gerbil electrophysiology and human tapping data

description: This .zip file contains spike PSTH and LFP data from the gerbil IC and human tapping data in Matlab format. Audio files of the stimuli are also included. See README for full details.
DOI: 10.5061/dryad.cb11j/1
title: Data 1.Masculinized and younger males attain higher reproductive success in a social rodent

description: I attached only one excel file with all data about males. File includes data about:  N° offspring sired, male AGD, male mean body weight, male age (1,2), female number in social group, male number in social group, mean group AGD, social group ID and year
DOI: 10.5061/dryad.d4vr0/5
title: Alignments

description: This folder contains coding sequence alignments and single copy ortholog alignments used to conduct phylogenetic analyses in this paper.
DOI: 10.5061/dryad.dk551/1
title: Physiological status of tsetse mothers and offspring at larviposition

description: The set consists of the physiological attributes of female tsetse Glossina pallidipes and the larva that they have just produced, or are just about to produce. For the mothers data are provide on the results of ovarian dissections carried out on the flies – including the sizes of the two largest oocytes in the paired ovaries, and the contents and size of the uterus. The length and degree of fray of the wings are also measured and used with the ovarian dissection information to assess the ovarian and chronological ages of the fly.  The dry weight, fat free dry weight and haematin contents of thorax and abdomen for the adult females is also given. For the pupae the dry weight and fat-free dry weight are provided. Various meteorological data are also produced. The Stata data set has a key identifying each of the variables.
DOI: 10.5061/dryad.f0780/1
title: catchingEventsTotRAZO

description: dataset used to run the dive model for razorbills
DOI: 10.5061/dryad.f0780/2
title: boutModel_dfRAZO

description: dataset used to run the bout model
DOI: 10.5061/dryad.f0780/3
title: catchingEventsTotCOGU

description: dataset used to run the dive model for common guillemots
DOI: 10.5061/dryad.f0780/4
title: boutModel_dfCOGU

description: dataset used to run the bout model
DOI: 10.5061/dryad.f5q10/1
title: Zip file containing CQ Drepanosaur CT scan data

description: DICOM slices of the Coelophysis Quarry drepanosaur (Avicranium renestoi) CT dataset
DOI: 10.5061/dryad.fg2b0/1
title: Luo_PRSB_Movie1_Kadsura_heteroclita_male_fl_Pinganshan_2015

description: Video S1. Resseliella midges visiting and ovipositing in a male flower of Kadsura heteroclita filmed by the first author in 2015 in Pinganshan, Forest Park, Guangdong, China.
DOI: 10.5061/dryad.fg2b0/2
title: Luo_PRSB_Movie2_Kadsura_oblongifolia_female_fl_Danzhou_Hainan_2016

description: Video S2. Resseliella midges visiting and ovipositing in a female flower of Kadsura oblongifolia filmed by the first author in 2016 in Danzhou, Hainan, China.
DOI: 10.5061/dryad.fg2b0/3
title: Luo_PRSB_Movie3_Schisandra_spec_Wang_193_male_fl_Hengshan_2015

description: Video S3. Resseliella midges visiting and ovipositing in a male flower of Schisandra spec._Wang_Z.W. 193 filmed by the first author in 2015 in Hengshan, Hunan, China.
DOI: 10.5061/dryad.fg2b0/4
title: Luo_PRSB_Movie4_Kadsura_longipedunculata_male_fl_Hengshan_1_2017

description: Video S4. Resseliella midges visiting and ovipositing in Kadsura longipedunculata, filmed by the first author in 2017 in Hengshan, Hunan, China.
DOI: 10.5061/dryad.n8274/1
title: Fouling communities, primary production and polymer degradation data

description: Tensile Properties, loss of surface area, optical density, net oxygen production, richness&shannon diversity on family level, abundances of identified organisms
DOI: 10.5061/dryad.q96g6/1
title: Airyscan Alexa568-Ubx Alexa488-svb DAPI Embryo 01_01

description: Embryo 01 imaging area 01. Airyscan imaging in the a1 segment of a fixed stage 15 Drosophila melanogaster embryo. Channel 1: Ubx labeled with Alexa 568 using IF. Channel 2: Transcription sites of svb labeled with Alexa 488 using IF against DIG-RNA probes targeting the first intronic region of svb. Channel 3: DAPI.
DOI: 10.5061/dryad.q96g6/2
title: Airyscan Alexa568-Ubx Alexa488-svb DAPI Embryo 02_01

description: Embryo 02 imaging area 01. Airyscan imaging in the a1 segment of a fixed stage 15 Drosophila melanogaster embryo. Channel 1: Ubx labeled with Alexa 568 using IF. Channel 2: Transcription sites of svb labeled with Alexa 488 using IF against DIG-RNA probes targeting the first intronic region of svb. Channel 3: DAPI.
DOI: 10.5061/dryad.q96g6/3
title: Airyscan Alexa568-Ubx Alexa488-svb DAPI Embryo 02_02

description: Embryo 02 imaging area 02. Airyscan imaging in the a1 segment of a fixed stage 15 Drosophila melanogaster embryo. Channel 1: Ubx labeled with Alexa 568 using IF. Channel 2: Transcription sites of svb labeled with Alexa 488 using IF against DIG-RNA probes targeting the first intronic region of svb. Channel 3: DAPI.
DOI: 10.5061/dryad.r5372/1
title: feedingBehavior
DOI: 10.5061/dryad.r5372/2
title: MetabolicRate
DOI: 10.5061/dryad.r5372/3
title: EnergyStores
DOI: 10.5061/dryad.r7v91/1
title: PLOT LEVEL DATA FOR DRYAD

description: These data include plot cover level data for 13 plant species sampled in their introduced and natives ranges.  Please see README tab for a description of the variables included.
DOI: 10.5061/dryad.rc416/1
title: Mammal PD Conservation planning data files

description: This zipped archive contains a) all data used in this study b) a version of the data formatted for use with Marxan and c) a sample parameter file and results for one conservation scenario.  A help file is also included.
DOI: 10.5061/dryad.t2q12/1
title: Ivens et al. 2018 Mol. Ecol

description: All data and scripts underlying figures and analyses presented in the publication and its supplements.
DOI: 10.5061/dryad.v49vd/4
title: Table3_Fig3a_4a_eggs_vs_size

description: All data from review table 3 which have been used to generate Figures 3a and 4a. Data refer to all studies summarized in Table 3 of the underlying publication and includes oral-aboral length of M. leidyi, egg production rates (ind.-1 d-1) and respective references, where those data have been sourced from.
DOI: 10.5061/dryad.v49vd/5
title: Fig.3b SPE_versus_Mass

description: Underlying data for Fig. 3b regarding Fraction of surplus energy allocated to reproduction of M. leidyi versus body mass (mgC), split up into native and invasive sub-populations. Check publication for details.
DOI: 10.5061/dryad.v49vd/6
title: Fig.4b_Egg_production_native_invasive_subpopulations_size_bins

description: Underlying data for Fig. 4b regarding egg production rates of native and invasive sub-populations versus 1cm size bins for M. leidyi. Check publication for details.
DOI: 10.5061/dryad.v94n6/1
title: Species lists and traits for Yasuní and BCI

description: Species lists, biogeographic distributions, and environmental traits for woody plant species from Yasuní, Ecuador and Barro Colorado Island (BCI), Panama. Species lists were derived from 50-ha plots maintained by the Pontificia Universidad Católica del Ecuador and the Smithsonian Tropical Research Institute Center for Tropical Forest Science. Biogeographic distributions and environmental traits (i.e., elevational range, drought tolerance) were computed for each species using curated occurrence records from the Global Biodiversity Information Facility (GBIF). Trait metadata are provided in the first tab of the Excel file.
DOI: 10.5061/dryad.vb047/10
title: TABLE S3

description: Motifs of PtrMATE proteins.
DOI: 10.5061/dryad.vb047/5
title: Figure S4

description: qRT-PCR analysis of transgenic poplar plants.
DOI: 10.5061/dryad.vb047/6
title: Figure S5

description: PtrMATE1 expression in the roots of poplar under Al treatments with different concentration.
DOI: 10.5061/dryad.vb047/7
title: Figure S6

description: Overexpression of PtrMATE1 in transgenic AtMATE knockout mutant (ATMATE-KO) and wild-type Arabidopsis confers Al tolerance. (A) Wild-type and transgenic Arabidopsis in MS medium containing 20 μM Al3+ for 10 d. PtrMATE1-OX:overexpression of PtrMATE1 in wild-type Arabidopsis, PtrMATE1-R:overexpression of PtrMATE1 in AtMATE knockout mutant.  (B) root growth of these transgenic plants with/without Al treated.Student’s t-test: *P &lt; 0.05, **P &lt; 0.01, ***P &lt; 0.001.
DOI: 10.5061/dryad.vb047/8
title: TABLE S1

description: Details of MATEs from different species.
DOI: 10.5061/dryad.vb047/9
title: TABLE S2

description: Primers for qRT-PCR and gene cloning in this study. F and R represented the forward and reverse primers, respectively. In the Excel file, the first column is Primers, the second column is Nucloetide sequence.
DOI: 10.5061/dryad.12f01/1
title: transcript data
DOI: 10.5061/dryad.23r95/1
title: Precopulatory traits
DOI: 10.5061/dryad.23r95/2
title: Sperm Number
DOI: 10.5061/dryad.3f158/1
title: Moe et al Ecol Evol Behaviour data
DOI: 10.5061/dryad.3f158/2
title: Moe et al Ecol Evol GLMM data
DOI: 10.5061/dryad.3f158/3
title: Moe et al Ecol Evol ID_tree_density_richness data
DOI: 10.5061/dryad.3f158/4
title: Moe et al Ecol Evol NMDS data
DOI: 10.5061/dryad.3s57p.1
title: Data from: Land use in mountain grasslands alters drought response and recovery of carbon allocation and plant-microbial interactions
DOI: 10.5061/dryad.3v5d2/1
title: Data on biological trait groups

description: Data on benthic biological trait groupings along the SW Finnish coast. Numbers represent individuals per m-2.
DOI: 10.5061/dryad.46vq7/1
title: Vortex PVA input files for threat assessment of Southern Resident Killer Whales

description: Input files used in modeling threats and management options for the Southern Resident Killer Whale population – for “Evaluating anthropogenic threats to endangered killer whales to inform effective recovery plans” by Lacy et al. 
Used with Vortex PVA software, version 10.2.9. (Available at www.vortex10.org/Vortex10.aspx)
DOI: 10.5061/dryad.4fv71/4
title: Fledgling weights and survival of chicks
DOI: 10.5061/dryad.4fv71/5
title: Data for calculating maternal effect
DOI: 10.5061/dryad.4nt0d/2
title: Environmental data_RAW

description: This file includes data on physical variables (e.g. SST, SSHd and DO) extracted for each day and location for a given tag. This RAW file provides environmental data that is used down stream in the GAMM analyses.
DOI: 10.5061/dryad.4nt0d/3
title: Maximum Depth_Filtered

description: This file includes data on maximum daily depth extracted for each day and location for a given tag. This file provides environmental data that is used down stream in the GAMM analyses and for assessment of maximum diving depth by size class.
DOI: 10.5061/dryad.4nt0d/4
title: TAD data_filtered

description: This file includes data on time spent by black marlin at depths &lt; 150m extracted for each day and location for a given tag. This file provides data that is used down stream in the GAMM analyses and for assessment of TAD by size class.
DOI: 10.5061/dryad.4nt0d/5
title: Full time-series data_RAW

description: This file includes raw time-series data extracted for a given tag from archival or transmitted time-series of temperature and depth. This file provides is used in down stream assessments of delta T utilisation by size class as well as to investigate high dive profiles.
DOI: 10.5061/dryad.561rp/1
title: Data_from_Morales-Briones_et_al_Sys_Bio_RETICULATE_HISTORY_OF LACHEMILLA
DOI: 10.5061/dryad.7145v/1
title: M57666

description: Figure 1 Diffraction data
DOI: 10.5061/dryad.7145v/2
title: SM458_001

description: Figure S1b X-ray fluorescence map
DOI: 10.5061/dryad.7145v/3
title: FigS3a

description: diffraction data
DOI: 10.5061/dryad.7145v/4
title: FigS3b
DOI: 10.5061/dryad.7145v/5
title: FigS3c

description: diffraction data
DOI: 10.5061/dryad.7145v/6
title: FigS3d

description: diffraction data
DOI: 10.5061/dryad.7145v/7
title: FigS3e

description: diffraction data
DOI: 10.5061/dryad.7145v/8
title: FigS3f

description: diffraction data
DOI: 10.5061/dryad.8395f/6
title: patch_diversitree

description: R code containing patch for the package "diversitree" to use hidden states.
DOI: 10.5061/dryad.9f2d8/1
title: analysis_IsoMetrics
DOI: 10.5061/dryad.9f2d8/2
title: analysis_logbooks
DOI: 10.5061/dryad.c15v5/5
title: VanWyngaardenM_etal_SeascapeGen_RCode

description: This R file contains pseudocode for the main analyses used in the publication "Oceanographic variation influences spatial genomic structure in the sea scallop, Placopecten magellanicus" by Van Wyngaarden, M et al. Not all steps are included in the code but examples of the major analyses (outlier selection, PCA, RDA, and multiple linear regressions) are presented. Running this code will not repeat all the analyses used in the publication but will allow readers to see what functions were used.
DOI: 10.5061/dryad.cc3n6j5/11
title: Amphibian_ED_Threat_EDGE_Isaac

description: Primary results from the phylogenetic analyses, including the ED score of all 7,238 species, the upper and lower 2.5% range of ED scores per species, the threat status of each species, its EDGE score, and the ED and EDGE scores reported for 4,307 species by Isaac et al.
DOI: 10.5061/dryad.cc3n6j5/12
title: amph_shl_new_Posterior_7238.1000.trees

description: First 1000 taxonomically complete, dated trees, containing 7,238 amphibian species.
DOI: 10.5061/dryad.cp423/1
title: Spencer & Broom Kleptoparasitism in urban gulls (Popn data)

description: This spreadsheet gives the headcounts for the total population recorded at the study site during fieldwork.
DOI: 10.5061/dryad.cp423/2
title: Spencer & Broom Kleptoparasitism in urban gulls (Klepto data)

description: This spreadsheet contains the data regarding kleptoparasitic events recorded at the study site, the outcome of kleptoparasitic events, whether the host defended or surrendered and the headcounts at foraging patches.
DOI: 10.5061/dryad.cp423/3
title: Spencer & Broom Kleptoparasitism in urban gulls (Foraging Rate)

description: This spreadsheet show the rate of foraging and number of food items occurring in patches at the study site.
DOI: 10.5061/dryad.cp423/4
title: Spencer & Broom Kleptoparasitism in urban gulls (Focal Animal Data)

description: This spreadsheet gives the data from the focal animal analyses and the foraging strategies attributed to foragers.
DOI: 10.5061/dryad.dm67f/1
title: Plate diagrams for the crinoid genera discussed in this paper

description: Plate diagrams for disparid and hybocrinid crinoids discussed in
this paper. (1) Eustenocrinus, (2) Daedalocrinus, (3) Cremacrinus, (4) Iocrinus, (5) hybocrinids,
applicable for both Hybocrinus and Hybocystites, although in the latter, ambulacra are recumbent
on some radial plates, (6) Isotomocrinus, (7) Anomalocrinus. Diagrams modified from Moore
(1962); not to scale; black filling, radial or superradial plate; horizontal rule, infraradial; crosshatching,
radianal plate; stippled, other radial plates.
DOI: 10.5061/dryad.h2ks3
title: Data from: Effects of zoochory on the spatial genetic structure of plant populations
DOI: 10.5061/dryad.n238t/1
title: Appendix 1 Nigritella data inds ver 3

description: All genetic data for individual accessions of Nigritella, including nuclear microsatellite data, plastid haplotype data and ITS type
DOI: 10.5061/dryad.pt11g/1
title: mouse_detrusor_electrophysiology_intracellular_spontaneous_1khz

description: Contains a zip archive of 14 data files obtained from the electrophysiology sessions that recorded spontaneous electrical activities of mouse detrusor muscle cells. The sampling rate is 1 kHz. Two columns without headers (First column gives the time stamp in seconds, and the second column gives voltage in mV)
DOI: 10.5061/dryad.pt11g/2
title: mouse_detrusor_electrophysiology_intracellular_spontaneous_4kHz_set1

description: Contains a zip archive of 4 data files obtained from the electrophysiology sessions that recorded spontaneous electrical activities of mouse detrusor muscle cells. The sampling rate is 4 kHz. Two columns without headers (First column gives the time stamp in seconds, and the second column gives voltage in mV)
DOI: 10.5061/dryad.pt11g/3
title: mouse_detrusor_electrophysiology_intracellular_spontaneous_4kHz_set2

description: Contains a zip archive of 6 data files obtained from the electrophysiology sessions that recorded spontaneous electrical activities of mouse detrusor muscle cells. The sampling rate is 4 kHz. Two columns without headers (First column gives the time stamp in seconds, and the second column gives voltage in mV)
DOI: 10.5061/dryad.pt11g/4
title: mouse_detrusor_electrophysiology_intracellular_spontaneous_4kHz_set3

description: Contains a zip archive of 3 data files obtained from the electrophysiology sessions that recorded spontaneous electrical activities of mouse detrusor muscle cells. The sampling rate is 4 kHz. Two columns without headers (First column gives the time stamp in seconds, and the second column gives voltage in mV)
DOI: 10.5061/dryad.q4157/1
title: LepidophagyPCA

description: Data including in the PCA section of our paper
DOI: 10.5061/dryad.q4157/2
title: LepidophagyALL_Chara

description: Characin dataset
DOI: 10.5061/dryad.q4157/3
title: LepidophagyALL_Serra

description: Serrasalmid dataset
DOI: 10.5061/dryad.q4157/4
title: LepidophageRCode

description: Sample R-Code used in this manuscript
DOI: 10.5061/dryad.q96g6/10
title: Live widefield JF635-HaloTag-Ubx late stage 6 embryo

description: Wide field imaging in the anterior region of a live late stage 6 Drosophila melanogaster embryo expressing HaloTag-Ubx. The embryo is injected with JF635 linked to a HaloTag ligand 2 hours after egg-laying. The embryo is epi-illuminated with a 633 nm laser and videos are captured with an exposure time of 100 ms.
DOI: 10.5061/dryad.q96g6/11
title: Live widefield JF635-HaloTag-Ubx stage 5 embryo

description: Wide field imaging in the anterior region of a live stage 5 Drosophila melanogaster embryo expressing HaloTag-Ubx. This Ubx is the wildtype protein. The embryo is injected with JF635 linked to a HaloTag ligand 2 hours after egg-laying. The embryo is epi-illuminated with a 633 nm laser and videos are captured with an exposure time of 100 ms.
DOI: 10.5061/dryad.q96g6/4
title: Airyscan Alexa568-Ubx Alexa488-svb DAPI Embryo 03_01

description: Embryo 03 imaging area 01. Airyscan imaging in the a1 segment of a fixed stage 15 Drosophila melanogaster embryo. Channel 1: Ubx labeled with Alexa 568 using IF. Channel 2: Transcription sites of svb labeled with Alexa 488 using IF against DIG-RNA probes targeting the first intronic region of svb. Channel 3: DAPI.
DOI: 10.5061/dryad.q96g6/5
title: Airyscan Alexa568-Ubx Alexa488-svb DAPI Embryo 03_02

description: Embryo 03 imaging area 02. Airyscan imaging in the a1 segment of a fixed stage 15 Drosophila melanogaster embryo. Channel 1: Ubx labeled with Alexa 568 using IF. Channel 2: Transcription sites of svb labeled with Alexa 488 using IF against DIG-RNA probes targeting the first intronic region of svb. Channel 3: DAPI.
DOI: 10.5061/dryad.q96g6/6
title: Airyscan Alexa568-Ubx Alexa488-svb DAPI Embryo 04_01

description: Embryo 04 imaging area 01. Airyscan imaging in the a1 segment of a fixed stage 15 Drosophila melanogaster embryo. Channel 1: Ubx labeled with Alexa 568 using IF. Channel 2: Transcription sites of svb labeled with Alexa 488 using IF against DIG-RNA probes targeting the first intronic region of svb. Channel 3: DAPI.
DOI: 10.5061/dryad.q96g6/7
title: Airyscan Alexa568-Ubx Alexa488-svb DAPI Embryo 04_02

description: Embryo 04 imaging area 02. Airyscan imaging in the a1 segment of a fixed stage 15 Drosophila melanogaster embryo. Channel 1: Ubx labeled with Alexa 568 using IF. Channel 2: Transcription sites of svb labeled with Alexa 488 using IF against DIG-RNA probes targeting the first intronic region of svb. Channel 3: DAPI.
DOI: 10.5061/dryad.q96g6/8
title: Live widefield JF635-HaloTag-NLS stage 5 embryo

description: Wide field imaging in the anterior region of a live stage 5 Drosophila melanogaster embryo expressing HaloTag-NLS. The HaloTag-NLS protein is unstable and degraded after translation. The embryo is injected with JF635 linked to a HaloTag ligand 2 hours after egg-laying. The embryo is epi-illuminated with a 633 nm laser and videos are captured with an exposure time of 100 ms.
DOI: 10.5061/dryad.q96g6/9
title: Live widefield JF635-HaloTag-Ubx(R3A N51A) stage 5 embryo

description: Wide field imaging in the anterior region of a live stage 5 Drosophila melanogaster embryo expressing HaloTag-Ubx(R3A N51A). This Ubx is DNA-binding deficient. The embryo is injected with JF635 linked to a HaloTag ligand 2 hours after egg-laying. The embryo is epi-illuminated with a 633 nm laser and videos are captured with an exposure time of 100 ms.
DOI: 10.5061/dryad.qb08c/1
title: Corticosterone levels of house wrens experimentally exposed to traffic noise.

description: Collected in the field. Excel used to create the data file. Site abbreviations; "IW" = Idlewild park; "AG" = the University of Nevada, Reno, Agricultural Experiment Station.
DOI: 10.5061/dryad.qf731/2
title: sifaka_GLMM_covariates_duration

description: Place in "data" folder before running analyses. For use in pairwise_dissimilarity_predictors.R script
DOI: 10.5061/dryad.qf731/3
title: beta_groom_same_12mo

description: Place in "data" folder before running analyses. For use in beta_div_glmms.R script.
DOI: 10.5061/dryad.qf731/4
title: Animal_DOB_sex

description: Place in "data" folder before running analyses.
DOI: 10.5061/dryad.qf731/5
title: Perofsky_mapping_file_sifaka

description: QIIME mapping file. Place in "data" folder before running analyses.
DOI: 10.5061/dryad.qf731/6
title: sifaka_relatedness

description: Matrix of genetic relatedness values among sifaka. Place in "data" folder before running analyses. For use in mantel_tests_relatedness_vs_microbiome.R script.
DOI: 10.5061/dryad.qf731/7
title: social_group_matrix_2012

description: Place in "data" folder before running analyses. For use in mantel_tests_relatedness_vs_microbiome.R script.
DOI: 10.5061/dryad.qf731/8
title: sifaka_unifrac_weighted_marked_openref

description: Matrix of weighted Unifrac distances among microbiome samples. Place in "data" folder before running analyses.
DOI: 10.5061/dryad.qp811/1
title: data for breeding attempts of northern wheatears with demographic parameters and climatic variables

description: Data for breeding attempts of northern whetears, Oenanthe oenanthe, including demographic parameters (reproduction, survival, nestling weight) and breeding time; data have been collected in the field during a long-term population monitoring project. Climatic data includede are from weather variables collected at the Ultuna Climate Station (59°82’ N, 17°65’ E). The original weather variables daily mean temperature and daily rainfall data can be retrieved from http://grodden.evp.slu.se/slu_klimat/index.html. Information about the variables included in this data file can be found in the README file for the whole data set (data set comprises 3 data files).
DOI: 10.5061/dryad.qp811/2
title: data on nestlings of northern wheatears

description: Data for ringed and measured nestlings of northern wheatears, Oenanthe oenanthe, including nestling weight, territory and parental covariates, climatic variables and estimates from a linear relationship between nestling weight and within-season breeding time. Climatic data included are from weather variables collected at the Ultuna Climate Station (59°82’ N, 17°65’ E). The original weather variables daily mean temperature and daily rainfall data can be retrieved from http://grodden.evp.slu.se/slu_klimat/index.html. Information about the variables included in this data file can be found in the README file for the whole data set (data set comprises 3 data files).