cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/85pxpdsx38
title: Survey of protein degradation rates across growth conditions in E. coli and S. cerevisiae.

description: We compiled two data sets from the literature on rates of protein degradation in E. coli and S. cerevisiae across growth conditions. We set out to look at trends that do not depend on the specific metabolic mechanisms behind the attainment of a certain growth level. To this end, we identified and quantified how degradation rates change as the overall growth rate of the cell changes. For each species, we annotated and computed the growth rate and the average degradation rate in different growth conditions. We find that degradation levels increase as cells grow slower. This dataset was compiled as part of our research study on protein degradation across growth conditions. Readers can find further information on the data and related findings by reading our article at the following link: https://doi.org/10.1101/2021.03.25.436692. We have divided this Mendeley dataset into two folders: (i) the first folder contains the compiled dataset as CSV files, as well as a README file to describe how we annotated and computed all the quantities from the literature; (ii) the second folder contains two python scripts to replicate our findings and further investigate the dataset, as well as a README file that described how to use the scripts.
DOI: 10.17632/9zfkrt8zbg
title: Efficacy and Tolerability of Systemic Therapies in Oral Lichen Planus – A Retrospective Cohort Study

description: Supplemental material.
DOI: 10.17632/mpdk4xm49d
title: Analysis of mathematical modelling approaches to capture human behaviour dynamics in agricultural pest and disease systems

description: Supporting data
DOI: 10.17632/n4n4r74bgz
title: Spectroscopic data of pleural effusion

description: Pleural effusion is a medical condition having its etiology in various primary diseases, eg. cardiological, pulmonological, and oncological. It is a side effect of diseases such as pneumonia, tuberculosis, cancer, heart failure, and inflammation which are responsible for causing inflammatory diseases of the pleura. Late detection of pleural effusion disturbs the respiratory function, heart operation or may cause bleeding into the pleural cavity. In such a case, there is an immediate requirement for medical intervention and drainage of the pleural space or execution of pleurodesis causing pleural plaques to fuse, which is an invasive and potentially life-threatening procedure.
Therefore, patients with fluid in the pleural cavity, especially a group with recurrent pleural effusion should be continuously monitored.
In a standard clinical procedure, the presence of pleural effusion is diagnosed by a physician with the use of chest radiography, ultrasonography, or computed tomography. Although ultrasound becomes portable and handheld the diagnosis is possible only in the clinics or medical centers so far. The monitoring of pleural effusion in outpatients is still an unsolved problem.
So far, the use of near-infrared spectroscopy (NIRS) to test the amount of hydro-derivative fluids in various biomedical applications has been developed. For example, a method for assessing brain edema, water composition in rabbit meal, the water content in moisturizing creams or ceramic plasters has been published. In this work, the data form noninvasive NIRS measurement in patients with pleural effusion were collected. The method for noninvasive detection of pleural effusion using continuous-wave near-infrared spectroscopy is presented. The method has been developed based on numerical simulations of light transport in turbid media and validated on phantoms mimicking tissues and on patients with excess pleural fluid undergoing thoracocentesis. 
Numerical simulations consisted in modeling light propagation in an optically turbid, non-homogeneous medium with tissue properties of peripulmonary structures and for various amounts of pleural fluid. A three-layer model depicting pleural effusion was adopted. It was assumed that the outer surface layer consists of skin, fat and muscle. Fiber optics were connected to this layer during measurements. Two fiber optics were used: one guiding the light from the source (emitter) and the second delivering to the spectrometer (detector). The second layer, present only when pleural effusion is present, is water layer. The third layer is the lung tissue layer. The NIRS measurement was performed in a reflective scenario.
DOI: 10.6084/m9.figshare.24298570.v1
title: Protection_fx_v2_data

description: This files are the necessary files to compute all the models and plots that are included in the paper called "Rarity mediates the species-specific response to protection of tropical reef fishes".env_filt.Rdata; hab_filt.Rdata; fine_habitat.Rdata & socio_filt.Rdata contain all environmental, habitat and socioeconomic covariates per survey ID.sites_info.Rdata; sites_correct.Rdata; NEOLI_Graham2014.csv; info.Rdata, & Site_Env_Socio_MPA_metadata_AllenAtlas_JB.csv contain all information about the surveys.fish.Rdata; fish_data.Rdata, & traits.Rdata contain all information about fish occurrences, abundances, biomass and their traits.<br>
DOI: 10.6084/m9.figshare.6743522.v2
title: Communication Based Control for DC Microgrids

description: Centralized communication-based control is one of the main methods that can be implemented to achieve autonomous advanced energy management capabilities in DC microgrids. However, its major limitation is the fact that communication bandwidth and computation resources are limited in practical applications. This can be often improved by avoiding redundant communications and complex computations. In this paper, an autonomous communication-based hybrid state/event driven control scheme is proposed. This control scheme is hierarchical and heuristic, such that on the primary control level, it encompasses state-driven local controllers, and on the secondary control level, an event-driven MG centralized controller (MGCC) is used. This heuristic hybrid control system aims at reducing the communication load and complexity, processor computations, and consequently system cost while maintaining reliable autonomous operation during all possible scenarios. A mathematical model for the proposed control scheme using Finite State Machines (FSM) has been developed and used to cover all the possible modes/sub-modes of operation, and assure seamless transitions among them during various events. Results of some case studies involving severe operational scenarios were presented and discussed. Results verify the validity and effectiveness of the proposed communication-based control scheme
DOI: 10.17632/6d5wtzdc8x
title: Input files with ORNL—mathematical phantoms of the human body for MCNP-4B

description: Abstract Protection against ionizing radiation requires information on the absorbed doses in organs of the human body. Implantation of many dosimeters in the human body is undesirable (or impossible), so the doses in organs are not measurable and some kind of dose calculation has to be applied. Calculation of doses in organs requests: (a) an exact description of the geometry of organs, (b) the chemical constitution of tissues, and (c) appropriate computer programs. The first two items, (a) and (b), ma... Title of program: Input files for program MCNP-4B [1] Catalogue Id: ADYF_v1_0 Nature of problem The human body and all organs are represented with equations of 3-D geometrical bodies. All equations and other relevant data (material composition, densities etc.) were programmed as input files for MCNP-4B. Seven data files are included in the distribution, AMALE, AFEMALE, AGE15, AGE10, AG5, AGE01, NEWB. Versions of this program held in the CPC repository in Mendeley Data ADYF_v1_0; Input files for program MCNP-4B [1]; 10.1016/j.cpc.2006.06.016 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2019)
DOI: 10.15468/dl.vek64v
title: Occurrence Download

description: A dataset containing 2263871 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "Year is 1975"
 ]
}

 The dataset includes 2263871 records from 1743 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009297-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xgc6nu
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020082-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10821723
title: Detection of an Earth-sized exoplanet orbiting the nearby ultracool dwarf star SPECULOOS-3

description: Light curves and spectra of SPECULOOS-3 used in the research work presented in the Nature Astronomy article "Detection of an Earth-sized exoplanet orbiting the nearby ultracool dwarf star SPECULOOS-3"
DOI: 10.5281/zenodo.10842634
title: Detection of an Earth-sized exoplanet orbiting the nearby ultracool dwarf star SPECULOOS-3

description: Light curves and spectra of SPECULOOS-3 used in the research work presented in the Nature Astronomy article "Detection of an Earth-sized exoplanet orbiting the nearby ultracool dwarf star SPECULOOS-3"
DOI: 10.15468/dl.pekj8t
title: Occurrence Download

description: A dataset containing 20928367 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is iNaturalist Research-grade Observations"
 ]
}

 The dataset includes 20928367 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0087181-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x4vcpy
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Diguetinus raptator Roewer, 1912"
 ]
}

 The dataset includes 51 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055090-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bjh3kx
title: Occurrence Download

description: A dataset containing 323 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dontostemon pinnatifidus",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 323 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012815-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vn9ek6
title: Occurrence Download

description: A dataset containing 1421 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Portugal",
 "TaxonKey is Lucanus cervus (Linnaeus, 1758)"
 ]
}

 The dataset includes 1421 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294522-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4z2kfz
title: Occurrence Download

description: A dataset containing 5373 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 {
 "or" : [
 "StateProvince ~CAUCA",
 "StateProvince is cauca",
 "StateProvince is cauca department",
 "StateProvince is cauca dept.",
 "StateProvince is cauca dept",
 "StateProvince ~cauca"
 ]
 },
 "TaxonKey is one of (Amphibia, Reptilia, Reptilia, Reptilia, Reptilia)"
 ]
 }
 ]
}

 The dataset includes 5373 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069018-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tw5qwu
title: Occurrence Download

description: A dataset containing 164 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gerbillus famulus Yerbury & Thomas, 1895"
 ]
}

 The dataset includes 164 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0284781-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3r2vf2
title: Occurrence Download

description: A dataset containing 192 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lasiocaryum munroi (C.B.Clarke) I.M.Johnst."
 ]
}

 The dataset includes 192 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004355-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qjk3uh
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xiphophorus couchianus (Girard, 1859)"
 ]
}

 The dataset includes 77 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294475-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vvwua5
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence, Material sample, Observation, Living Specimen)",
 "Country is China",
 "Geometry POLYGON((67.08191 23.40920,117.99359 23.40920,117.99359 43.76516,67.08191 43.76516,67.08191 23.40920))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ochotona curzoniae (Hodgson, 1858)"
 ]
}

 The dataset includes 43 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0284784-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wkk6zw
title: Occurrence Download

description: A dataset containing 9039 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bonamia Thouars"
 ]
}

 The dataset includes 9039 records from 254 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047060-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xpjtgc
title: Occurrence Download

description: A dataset containing 263 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Dichrooscytus gustavi Josifov, 1981"
 ]
}

 The dataset includes 263 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294523-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6ffceh
title: Occurrence Download

description: A dataset containing 257 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ortalis superciliaris G.R.Gray, 1867)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 257 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294809-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8cvm3c
title: Occurrence Download

description: A dataset containing 300 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lapeirousia silenoides (Jacq.) Ker Gawl."
 ]
}

 The dataset includes 300 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004056-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hwngv9
title: Occurrence Download

description: A dataset containing 133 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "TaxonKey is Setaria hunzikeri Anton"
 ]
}

 The dataset includes 133 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047066-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dur8vk
title: Occurrence Download

description: A dataset containing 767 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Conopophila whitei (North, 1910))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 767 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294509-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kzka4b
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Galeus murinus (Collett, 1904)",
 "Year 2000-2023"
 ]
}

 The dataset includes 49 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294784-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e8x752
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nepeta tibestica Maire"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047075-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zddaz4
title: Occurrence Download

description: A dataset containing 4728 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-75.88241 1.449,-75.9159 1.43572,-75.89992 1.39934,-75.87317 1.3851,-75.84526 1.40261,-75.85392 1.43668,-75.88241 1.449,-75.88241 1.449))"
 ]
}

 The dataset includes 4728 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004059-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rrtnj2
title: Occurrence Download

description: A dataset containing 277 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-119.16976 13.92893,-83.83024 13.92893,-83.83024 28.07107,-119.16976 28.07107,-119.16976 13.92893))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Agave cupreata Trel. & A.Berger"
 ]
}

 The dataset includes 277 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294515-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u4rs8a
title: Occurrence Download

description: A dataset containing 62584 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ptyonoprogne concolor (Sykes, 1832))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 62584 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294814-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9qj53v
title: Occurrence Download

description: A dataset containing 185 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nepeta teucriifolia Willd."
 ]
}

 The dataset includes 185 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047067-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pyeycp
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Indonesia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ziziphus mauritiana Lam."
 ]
}

 The dataset includes 69 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0284801-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vdhbmu
title: Occurrence Download

description: A dataset containing 204989 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ortygornis pondicerianus (J.F.Gmelin, 1789))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 204989 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294508-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k9xdxy
title: Occurrence Download

description: A dataset containing 21798 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Penelope montagnii (Bonaparte, 1856))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 21798 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0294815-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rdc8gk
title: Occurrence Download

description: A dataset containing 29342 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is da86174a-a605-43a4-a5e8-53d484152cd3",
 "TaxonKey is Cistus salviifolius L."
 ]
}

 The dataset includes 29342 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047061-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.