cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30094503
title: Visualizing NEK9 in action: aptamer-based fluorescent probes for real-time live-cell imaging

description: Live-cell imaging of intracellular proteins enables real-time observation of protein dynamics under near-physiological conditions, providing pivotal insights for both fundamental life science research and medical applications. However, due to limitations such as poor probe permeability and cytotoxicity associated with conventional antibody-based or genetically encoded labeling techniques, live-cell imaging remains a significant challenging. To address these limitations, here in this study, we developed and rigorously validated a novel aptamer-based fluorescent probe for real-time imaging of NEK9 kinase in living cells. First, through <i>in vitro</i> capture-SELEX, a DNA aptamer termed as Apt-011 which could selectively bind NEK9 was identified. Further, capitalizing on the small size, low immunogenicity, and synthetic flexibility of aptamers, we engineered a "signal-on" NEK9-specific aptamer-based fluorescent probe platform. This design leverages the aptamer’s target-­induced conformational change to physically separate the fluorophore-quencher pair, and it has been validated that this fluorescent probe platform could successfully visualize intracellular NEK9 in live-cells without obvious cytotoxicity (cell viability &gt; 95% at working concentrations), offering new opportunities to study NEK9-associated signaling pathways. This work not only provides a robust tool for kinase research but also establishes a generalizable strategy to overcome key bottlenecks in live-cell imaging through rational aptamer engineering.
DOI: 10.6084/m9.figshare.30094503.v1
title: Visualizing NEK9 in action: aptamer-based fluorescent probes for real-time live-cell imaging

description: Live-cell imaging of intracellular proteins enables real-time observation of protein dynamics under near-physiological conditions, providing pivotal insights for both fundamental life science research and medical applications. However, due to limitations such as poor probe permeability and cytotoxicity associated with conventional antibody-based or genetically encoded labeling techniques, live-cell imaging remains a significant challenging. To address these limitations, here in this study, we developed and rigorously validated a novel aptamer-based fluorescent probe for real-time imaging of NEK9 kinase in living cells. First, through <i>in vitro</i> capture-SELEX, a DNA aptamer termed as Apt-011 which could selectively bind NEK9 was identified. Further, capitalizing on the small size, low immunogenicity, and synthetic flexibility of aptamers, we engineered a "signal-on" NEK9-specific aptamer-based fluorescent probe platform. This design leverages the aptamer’s target-­induced conformational change to physically separate the fluorophore-quencher pair, and it has been validated that this fluorescent probe platform could successfully visualize intracellular NEK9 in live-cells without obvious cytotoxicity (cell viability &gt; 95% at working concentrations), offering new opportunities to study NEK9-associated signaling pathways. This work not only provides a robust tool for kinase research but also establishes a generalizable strategy to overcome key bottlenecks in live-cell imaging through rational aptamer engineering.
DOI: 10.6084/m9.figshare.30094507
title: A CityGML ADE for flood simulations

description: Floods are one of the most frequent types of destructive natural disaster that causes serious safety risks and economic losses. Flood simulation has been an effective way to model the behavior and dynamics of flood and support the analysis like flood disaster assessment. Currently, most 3D flood simulations often take heterogenous data (e.g. flood measurements, terrain data) as input for calculation, but lack a unified representation of these data, and the environment objects are normally modeled in a simplified manner with only geometric information while neglecting their semantics. To address this gap, this study developed a CityGML Flood Application Domain Extension (Flood ADE) for representing and storing flood information along with semantic information of 3D urban objects. We presented the methodology for developing the CityGML Flood ADE and described its thematic modules. The effectiveness of the developed Flood ADE is demonstrated by using 3D building data and flood data in the Lundamo area of the Sokna River, Trondheim, Norway. This work will not only support flood prevention decisions, analysis, and post-disaster assessments, but also promote cross-departmental collaborations.
DOI: 10.6084/m9.figshare.30094507.v1
title: A CityGML ADE for flood simulations

description: Floods are one of the most frequent types of destructive natural disaster that causes serious safety risks and economic losses. Flood simulation has been an effective way to model the behavior and dynamics of flood and support the analysis like flood disaster assessment. Currently, most 3D flood simulations often take heterogenous data (e.g. flood measurements, terrain data) as input for calculation, but lack a unified representation of these data, and the environment objects are normally modeled in a simplified manner with only geometric information while neglecting their semantics. To address this gap, this study developed a CityGML Flood Application Domain Extension (Flood ADE) for representing and storing flood information along with semantic information of 3D urban objects. We presented the methodology for developing the CityGML Flood ADE and described its thematic modules. The effectiveness of the developed Flood ADE is demonstrated by using 3D building data and flood data in the Lundamo area of the Sokna River, Trondheim, Norway. This work will not only support flood prevention decisions, analysis, and post-disaster assessments, but also promote cross-departmental collaborations.
DOI: 10.5281/zenodo.17092279
title: World Quantum Theory: A Unified Framework for Quantum and Classical Physics Based on Frequency

description: World Quantum Theory: A Unified Framework for Quantum and Classical Physics Based on FrequencyAbstractThis paper proposes the "World Quantum" as a fundamental unit of the physical world, whose intrinsic motion is based on the Planck frequency, forming the quantum foundation of space-time and energy. Within this framework, a generalized particle wavelength formula λ=xℏ/p is derived, where the projective coupling factor x reflects environmental modulation of quantum behavior. Momentum, mass, and total energy formulas are further established, and the "World Factor" Φw=(c/v)2  is introduced to quantify the bending effect of external energy fields on the particle's trajectory. In this model, the de Broglie relation λ=h/p can be regarded as a resonant special case under terrestrial conditions with x=2π. The total energy expression Eq=xℏfwΦw  unifies wave-particle duality with relativistic dynamics, offering a new perspective for the integration of classical and quantum physics, and proposes several experimentally testable schemes.Keywords: World Quantum, Generalized Wavelength Formula, Projective Coupling Factor, World Factor, Frequency Model, Negative Feedback Mechanism
DOI: 10.15468/dl.zge9dz
title: Occurrence Download

description: A dataset containing 186 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Leporinus agassizii)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 186 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049175-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5x63bj5t
title: MassIVE MSV000099121 - Data set belonging to the chapter "LC-MS data processing using xcms", in Computational Methods and Data Analysis for Metabolomics.
title: The data set provided is used to demonstrate a complete, reproducible LC-MS data preprocessing workflow using *xcms*, illustrated with a small untargeted LC-MS metabolomics data set. Special emphasis is placed on the best practices for data handling, parameter optimization, and quality control.
DOI: 10.5281/zenodo.17090246
title: IOTC Collection and Reporting Forms for the Regional Observer Scheme

description: Forms developed by the IOTC Secretariat in 2010 to support the collection of catch and fisheries data by scientific observers under the Regional Observer Scheme, available in English and French.

This deposit contains the forms developed by the IOTC Secretariat in November 2010 to support the collection of catch and other fisheries data by scientific observers within the framework of the Regional Observer Scheme (ROS), as required under IOTC Resolution 09/04.

The ten forms were designed for use onboard longline (LL), purse seine (PS), pole-and-line (PL), and gillnet (GN) vessels, with some applicable across gear types (‘GEN’ = generic):





Form 1-GEN: Vessel and trip information




Form 2-GEN: Vessel-specific gear details (PS, PL, GN)




Form 2-LL: Pelagic longline gear and operation information (LL)




Form 3-GEN: Surface fishery activity daily log (PS, PL, GN)




Form 4-GN: Fishing event – Gillnet




Form 4-LL: Fishing event – Longline




Form 4-PL: Fishing event – Pole-and-line




Form 4-PS: Fishing event – Purse seine




Form 5-GEN: Fishing/supply vessel sightings




Form 6-GEN: Transhipment



The forms were created in Microsoft Publisher and are available in both .pub and .pdf formats, in English and French.
DOI: 10.15468/dl.2dhxnp
title: Occurrence Download

description: A dataset containing 33233 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Circus aeruginosus",
 "Year is greater than 2013",
 "Geometry MULTIPOLYGON (((19.51 47.46, 6.41 47.46, 6.41 36.21, 19.51 36.21, 19.51 47.46)))"
 ]
}

 The dataset includes 33233 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049178-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60686/t-fsd3943
title: FSD3943 Political Life and Public Pedagogy in the Higher Music Education: Survey in Nordic Countries 2024
DOI: 10.6084/m9.figshare.30094501
title: 第6章 城市空间感知测度数据基础

description: 本部分开源数据和代码主要包含城市空间感知地理空间解析、文本语义解析与数据特征解析的相关处理过程。
DOI: 10.6084/m9.figshare.30094501.v1
title: 第6章 城市空间感知测度数据基础

description: 本部分开源数据和代码主要包含城市空间感知地理空间解析、文本语义解析与数据特征解析的相关处理过程。
DOI: 10.15468/dl.7tasjy
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Castilla elastica",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049179-250827131500795/datasets/export for details.
DOI: 10.5281/zenodo.17091989
title: Unitree Unilidar L1 scans in CERN facilities

description: This dataset contains bag files with non-repetitive LiDAR scans and IMU data, collected across six structurally challenging environments.
DOI: 10.5281/zenodo.17091990
title: Unitree Unilidar L1 scans in CERN facilities

description: This dataset contains bag files with non-repetitive LiDAR scans and IMU data, collected across six structurally challenging environments.
DOI: 10.15468/dl.98hnj9
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Castilla elastica",
 "Country is Comoros",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049180-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c879tj
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Castilla elastica",
 "Country is Cuba",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049181-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qbpqdk
title: Occurrence Download

description: A dataset containing 11121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Hong Kong, Macao, Chinese Taipei)",
 "HasCoordinate is true",
 "Year is greater than or equal to 1946",
 "Year is less than or equal to 1946"
 ]
}

 The dataset includes 11121 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049149-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yffxkx
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Microphis leiaspis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 83 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049183-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sv3puy
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Castilla elastica",
 "Country is Dominican Republic",
 "HasCoordinate is true"
 ]
}

 The dataset includes 21 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049185-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25525/kba-fdzoff.zfzrbs.2015.2
title: Bestand im Zentralen Fahrzeugregister 2015 (Off-Site, Variante S)
DOI: 10.15468/dl.kj2ams
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Castilla elastica",
 "Country is El Salvador",
 "HasCoordinate is true"
 ]
}

 The dataset includes 39 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049187-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7fhaty
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Arcopotamonautes platynotus, Potamonautes raybouldi, Arcopotamonautes raybouldi, Potamonautes reidi, Longipotamonautes reidi, Potamonautes rodolphianus, Rotundopotamonautes rodolphianus, Potamonautes rukwanzi, Rotundopotamonautes rukwanzi, Potamonautes senegalensis, Occidensonautes senegalensis, Potamonautes sidneyi, Potamonautes stanleyensis, Acanthothelphusa stanleyensis, Potamonautes subukia, Rotundopotamonautes subukia, Potamonautes suprasulcatus, Potamonautes triangulus, Occidensonautes triangulus, Potamonautes tuerkayi, Potamonautes unispinus, Potamonautes walderi, Acanthothelphusa walderi, Potamonautes warreni, Potamonautes williamsi, Rotundopotamonautes williamsi, Potamonemus mambilorum, Potamonemus sachsi, Procambarus clarkii, Seychellum alluaudi, Seychellum mahefregate, Seychellum silhouette, Skelosophusa gollardi, Skelosophusa prolixa, Sudanonautes africanus, Sudanonautes aubryi, Sudanonautes chavanesii, Sudanonautes faradjensis, Sudanonautes floweri, Sudanonautes granulatus, Sudanonautes kagoroensis, Sudanonautes monodi, Sudanonautes nigeria, Sudanonautes orthostylis, Sudanonautes sangha, Thermodiaptomus galeboides, Tropodiaptomus ctenopus, Tropodiaptomus neumanni, Tropodiaptomus simplex, Tropodiaptomus stuhlmanni, Typhlocaris lethaea, Typhlopatsa pauliani)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "Issue" : [
 "is one of (Recorded date invalid, Recorded date mismatch, Recorded date unlikely, Modified date invalid)"
 ]
 }
 },
 "Geometry MULTIPOLYGON (((59.2345 -15.8834, 59.2192 -15.9401, 59.9717 -15.9401, 59.949 -15.8852, 59.5935 -15.7371, 59.2345 -15.8834)), ((57.0534 -10.8396, 57.1988 -10.5508, 57.1156 -10.1867, 56.7115 -9.8521, 56.2347 -9.9832, 56.0941 -10.3875, 56.3286 -10.8413, 56.6862 -10.991, 57.0534 -10.8396)), ((56.2582 -7.6751, 56.5989 -7.542, 56.789 -7.1822, 56.7426 -6.9401, 55.8366 -6.9401, 55.7807 -7.0342, 55.8667 -7.4864, 56.2582 -7.6751)))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049186-250827131500795/datasets/export for details.
DOI: 10.15468/dl.9khqku
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Castilla elastica",
 "Country is Guatemala",
 "HasCoordinate is true"
 ]
}

 The dataset includes 16 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049188-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/0sb-13j-5vc
title: Aphanopsis coenosa (Ach.) Coppins & P. James

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/5hj-cbd-jd2
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/s76-r1x-pbe
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/18g-adm-r9h
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/z7j-q6t-mmg
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/9zg-7e7-wpj
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/9e7-sn6-4p6
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.25574/28259
title: Chandra X-ray Observatory ObsId 28259

description: Constraining the supermassive black hole occupation fraction with post-merger galaxies
DOI: 10.3535/h6l-gtd-r6g
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/qtt-tng-fgy
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/yte-qtq-w4p
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/0nk-fdy-apw
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/977-5rd-hlq
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/l3e-ls9-e2g
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/wt7-s0q-ebk
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/cd0-zyb-4m1
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/gwv-yat-29m
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/172-010-myh
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/fa1-088-lqw
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/q96-ztr-c4n
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/471-vyw-grv
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/jb6-pqe-e68
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/p8g-czd-gcz
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/01l-6qj-179
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/7lz-ste-lhj
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/r2f-d3f-fem
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/155-txa-h0n
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/x8c-p5c-aht
title: Aspicilia candida (Anzi) Hue

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/d44-bhh-13y
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/b2a-mv3-9ef
title: Aspicilia candida (Anzi) Hue

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/ygq-a8h-6xd
title: Aspicilia candida (Anzi) Hue

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/kwb-1dl-hls
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/rlw-gfk-j4h
title: Aspicilia candida (Anzi) Hue

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.5f8e2h
title: Occurrence Download

description: A dataset containing 1024190 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Biome of Australia Soil Environments"
 ]
}

 The dataset includes 1024190 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049176-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/lly-9m1-4hc
title: Arthrorhaphis citrinella (Ach.) Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/0p2-7sy-gnc
title: Aspicilia candida (Anzi) Hue

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/qp4-7q2-llx
title: Aspicilia candida (Anzi) Hue

description: Digital Specimen for the physical specimen hosted at University of Graz.