cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.kfk33t
title: Occurrence Download

description: A dataset containing 1192 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pseudosaltator rufiventris)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 1192 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023969-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mahnjb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Pheugopedius genibarbis)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023970-250802193616735/datasets/export for details.
DOI: 10.15468/dl.ws63sd
title: Occurrence Download

description: A dataset containing 9627 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pinus sibirica"
 ]
}

 The dataset includes 9627 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023974-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cm8g8v
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Pheugopedius genibarbis)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023972-250802193616735/datasets/export for details.
DOI: 10.15468/dl.k572av
title: Occurrence Download

description: A dataset containing 31757 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Pheugopedius genibarbis)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 31757 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023971-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6g69cc
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Canthium fenicis"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023973-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y5rrzh
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Botryllus schlosseri",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023975-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ghcaq5
title: Occurrence Download

description: A dataset containing 1188 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is one of (Ethiopia, Tanzania, United Republic of, Kenya, Uganda, Malawi, Madagascar, Mauritius, Mozambique, Eritrea, Comoros, Djibouti, Rwanda, Burundi, South Sudan)",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Terminalia brownii, Cordia africana)"
 ]
}

 The dataset includes 1188 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023977-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m9yyj3
title: Occurrence Download

description: A dataset containing 1637 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pseudoscops grammicus)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 1637 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023978-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bxqqsv
title: Occurrence Download

description: A dataset containing 6632 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pseudoseisura cristata)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 6632 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023979-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n9rp8z
title: Occurrence Download

description: A dataset containing 15248 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eophona migratoria",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15248 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023976-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xx3wew
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Parakneria damasi)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023980-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16752427
title: Millions of inequivalent quadratic APN functions in eight variables

description: This dataset contains the look-up tables of the new 3,775,599 inequivalent quadratic APN functions in dimension eight (up to EA-equivalence) found by the approaches described in our work [C. Beierle, P. Langevin, G. Leander, A. Polujan, S. Rasoolzadeh. Millions of inequivalent quadratic APN functions in eight variables. arXiv:2508.04644 (2025)], presented at the 10th International Workshop on Boolean Functions and their Applications (BFA), September 1-5, 2025, Larnaca, Cyprus.

The file new_apns.txt contains the look-up tables of these 3,775,599 new quadratic APN functions.

Prior to our work, 32,892 quadratic APN functions in eight variables are known (up to EA-equivalence). Those are: The 22 quadratic APN functions listed in [EP09], the 8,157 APN functions constructed by the QAM method [YWL14], the 10 APN functions presented in [WTG13], the two APN functions from the Taniguchi family [Tan19], the 12,921 APN functions from [BL22], the 5,412 APN functions presented in [YP22], and the 6,368 APN functions constructed in [BLP22].
DOI: 10.5281/zenodo.16752428
title: Millions of inequivalent quadratic APN functions in eight variables

description: This dataset contains the look-up tables of the new 3,775,599 inequivalent quadratic APN functions in dimension eight (up to EA-equivalence) found by the approaches described in our work [C. Beierle, P. Langevin, G. Leander, A. Polujan, S. Rasoolzadeh. Millions of inequivalent quadratic APN functions in eight variables. arXiv:2508.04644 (2025)], presented at the 10th International Workshop on Boolean Functions and their Applications (BFA), September 1-5, 2025, Larnaca, Cyprus.

The file new_apns.txt contains the look-up tables of these 3,775,599 new quadratic APN functions.

Prior to our work, 32,892 quadratic APN functions in eight variables are known (up to EA-equivalence). Those are: The 22 quadratic APN functions listed in [EP09], the 8,157 APN functions constructed by the QAM method [YWL14], the 10 APN functions presented in [WTG13], the two APN functions from the Taniguchi family [Tan19], the 12,921 APN functions from [BL22], the 5,412 APN functions presented in [YP22], and the 6,368 APN functions constructed in [BLP22].
DOI: 10.15468/dl.4vjtyn
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Vinca major"
 ]
}

 The dataset includes 34 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023981-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29822132
title: test

description: Urbanization constitutes a primary driver of the ongoing global biodiversity crisis, yet how historical urban legacy effects shape contemporary biodiversity remains unclear. Neglecting lagged ecological consequences such as extinction debts and colonization credits could obscure both the risks of future urban biodiversity loss and the effectiveness of conservation efforts. Here, by integrating equilibrium and nonequilibrium models, we quantified the legacy effects of urbanization on bird communities and species in China over the past 31 years.
DOI: 10.6084/m9.figshare.29822132.v3
title: test

description: Urbanization constitutes a primary driver of the ongoing global biodiversity crisis, yet how historical urban legacy effects shape contemporary biodiversity remains unclear. Neglecting lagged ecological consequences such as extinction debts and colonization credits could obscure both the risks of future urban biodiversity loss and the effectiveness of conservation efforts. Here, by integrating equilibrium and nonequilibrium models, we quantified the legacy effects of urbanization on bird communities and species in China over the past 31 years.
DOI: 10.6084/m9.figshare.29822132.v2
title: Multidecadal legacy effects of uneven urbanization yield divergent prospects for bird biodiversity

description: Urbanization constitutes a primary driver of the ongoing global biodiversity crisis, yet how historical urban legacy effects shape contemporary biodiversity remains unclear. Neglecting lagged ecological consequences such as extinction debts and colonization credits could obscure both the risks of future urban biodiversity loss and the effectiveness of conservation efforts. Here, by integrating equilibrium and nonequilibrium models, we quantified the legacy effects of urbanization on bird communities and species in China over the past 31 years.
DOI: 10.15468/dl.dq4aun
title: Occurrence Download

description: A dataset containing 4794 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pseudoseisura gutturalis)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 4794 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023982-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9rukhk
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Pheugopedius genibarbis)",
 "Country is one of (Åland Islands, Albania, Andorra, Austria, Belarus, Belgium, Bosnia and Herzegovina, Bulgaria, Croatia, Czechia, Denmark, Estonia, Faroe Islands, Finland, France, Germany, Gibraltar, Greece, Guernsey, Holy See, Hungary, Iceland, Ireland, Isle of Man, Italy, Jersey, Latvia, Liechtenstein, Lithuania, Luxembourg, Malta, Moldova, Republic of, Monaco, Montenegro, Netherlands, North Macedonia, Norway, Poland, Portugal, Romania, Russian Federation, San Marino, Serbia, Slovakia, Slovenia, Spain, Svalbard and Jan Mayen, Sweden, Switzerland, Ukraine, United Kingdom of Great Britain and Northern Ireland)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023983-250802193616735/datasets/export for details.
DOI: 10.15468/dl.rqy4k2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Pheugopedius genibarbis)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023985-250802193616735/datasets/export for details.
DOI: 10.25345/c5qf8jx9m
title: MassIVE MSV000098754 - metabolomics data for Fumarate Hydratase deficiency triggers disulfidptosis under glucose deprivation
title: This dataset contains metabolomics and metabolic flux data related to the article "Fumarate Hydratase deficiency triggers disulfidptosis under glucose deprivation".
DOI: 10.15468/dl.p6q347
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Pheugopedius genibarbis)",
 "Country is one of (Algeria, Angola, Benin, Botswana, British Indian Ocean Territory, Burkina Faso, Burundi, Cabo Verde, Cameroon, Central African Republic, Chad, Comoros, Congo, Congo, Democratic Republic of the, Côte d’Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Eswatini, Ethiopia, French Southern Territories, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Ascension and Tristan da Cunha, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, South Sudan, Sudan, Tanzania, United Republic of, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023986-250802193616735/datasets/export for details.
DOI: 10.15468/dl.4qr6f6
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Canthium megacarpum"
 ]
}

 The dataset includes 34 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023987-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16757989
title: Epidemics and Wet and Dry Grades in China from 1470 to 1911

description: Epidemics are defined as the occurrence of infectious disease outbreaks that spread rapidly across human populations within a defined geographic area and time period, causing significant morbidity or mortality, as documented in historical records. The original data of epidemics in this study come from the “General Collection of Chinese Meteorological Records for 3000 Years” (Zhang, 2004), the “History of Famine in China” (Meng, 1999) and the “Chronicle of Human Disasters” (Fan, 1998). The data include epidemics occurred in China from 1369 to 1911.

The data of drought and flood disasters come from the “Atlas of Drought and Flood Distribution in China in the Past 500 Years” (The Academy of Meteorological Sciences, 1980). This study adopts the standardized drought/flood classification system established by Shi and Zhang (1996). The data include wet and dry grades from 1470 to 1911.
DOI: 10.5281/zenodo.16757990
title: Epidemics and Wet and Dry Grades in China from 1470 to 1911

description: Epidemics are defined as the occurrence of infectious disease outbreaks that spread rapidly across human populations within a defined geographic area and time period, causing significant morbidity or mortality, as documented in historical records. The original data of epidemics in this study come from the “General Collection of Chinese Meteorological Records for 3000 Years” (Zhang, 2004), the “History of Famine in China” (Meng, 1999) and the “Chronicle of Human Disasters” (Fan, 1998). The data include epidemics occurred in China from 1369 to 1911.

The data of drought and flood disasters come from the “Atlas of Drought and Flood Distribution in China in the Past 500 Years” (The Academy of Meteorological Sciences, 1980). This study adopts the standardized drought/flood classification system established by Shi and Zhang (1996). The data include wet and dry grades from 1470 to 1911.
DOI: 10.15468/dl.sx4z9a
title: Occurrence Download

description: A dataset containing 7836 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pseudoseisura unirufa)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 7836 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023989-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qhv2xg
title: Occurrence Download

description: A dataset containing 48000 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pseudoseisura lophotes)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 48000 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023988-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16593629
title: IMVL

description: Code and Data StructureThe repository contains three core components:

1. Fortran source code (Fortran code.zip)

2. Generated NetCDF data files

3. MATLAB visualization code (Matlab code.zip)

Fortran Code Execution:

Executing the Fortran code generates NetCDF files containing model outputs including temperature, salinity, currents, bathymetry, and sea surface height.

Directory Organization:The Fortran code.zip archive contains 10 directories, each named according to:

· Topographic steepness parameter (A)

· Coriolis force inclusion (cf)Example directory names:

· A=0-0cf: Strait topography (A=0) without Coriolis force

· A=0.8: Sill topography (A=0.8) with Coriolis force (f=10⁻⁴)

· A=0 zerostart: The codes of “4.2.1 Channel zero start-up example”: strait topography (A=0) with Coriolis force (f=10⁻⁴) and sea water stays still.

Each directory includes three key source files:

1. Original POM model (pom2k.f)

2. Parameter-configured POM (pom2kba.f)

3. Enhanced POM with the variable-limit integration method (pomdsba.f)

Compilation Commands:Within each directory:

1. make ba:

o Executes pom2kba.f

o Generates output: pom2kba.nc (standard POM)

2. make dsba:

o Executes pomdsba.f

o Generates output: pomdsba.nc (variable-limit integration enhanced POM)

NetCDF File Naming Convention:Files follow: <model>_<topography>_<coriolis>.ncExamples:

· pom2kba-ibm-4-0cf.nc:Standard POM · A=0.4 · No Coriolis

· pomdsba-imvl-2.nc:variable-limit integration enhanced POM · A=0.2 · With Coriolis (f=10⁻⁴)

MATLAB Visualization:The Matlab code.zip contains all figure-generation scripts named as f<number>.m (e.g., executing f11.m reproduces Figure 11 from the manuscript).