cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27324861.v1
title: Source Data file.xlsx

description: Extreme heat and traffic-related air pollution (TRAP) have been linked to worsening chronic health disorders, however, their combined effects on diabetic nephropathy (DN) are little understood. Leptin receptor-deficient db/db mice were exposed to heat (40 °C) and NO<sub>2</sub> (5 ppm) separately for 4 hours per day over 6 weeks to investigate the synergistic effects on the progression of DN. We found that co-exposure to high temperature and NO<sub>2</sub> elevated blood glucose levels and exacerbated histopathological changes. Additionally, there were increased oxidation indicators (ROS, MDA, 8-OHdG) and decreased antioxidant indicators (CAT, SOD, GSH-PX), along with elevated inflammation markers (TNF-α, IL-1β, IL-6). The expressions of transient receptor potential (TRP) ion channels (TRPV1, TRPV4, TRPA1, TRPM2) were also upregulated. Our findings indicate that co-exposure to high temperature and NO<sub>2</sub> disrupted the metabolic and autophagy pathway, increasing the expression of APOA1 and mTOR while decreasing AMPK and LC3-I/II expression. This disruption promoted the progression of DN. In contrast, capsazepine (CZP) reduced TRP expression, inflammatory markers, oxidative stress, metabolic and autophagy disorders, thereby mitigating renal damage and alleviating the progression of diabetic nephropathy. We identify environmental and climatic risk factors associated with DN that will influence the future survival conditions of people with diabetes and highlight their importance in management strategies.
DOI: 10.15468/dl.guq2zk
title: Occurrence Download

description: A dataset containing 21532 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen, Occurrence evidence)",
 "Geometry POLYGON((-30 32,50 32,50 72,-30 72,-30 32))",
 "OccurrenceStatus is Present",
 "TaxonKey is Briza maxima L.",
 "Year 1990-2024"
 ]
}

 The dataset includes 21532 records from 355 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010628-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.reqwwh
title: Occurrence Download

description: A dataset containing 5132 species occurrences available in GBIF matching the query:
{
 "GadmGid" : [
 "is one of (COL.2.71_2, COL.2.120_2, COL.13.8_2)"
 ]
}

 The dataset includes 5132 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010630-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27324762
title: Updating the taxonomy of polymorphic plant taxa: six Atlantic Forest species segregated from the widely circumscribed <i>Oxalis polymorpha</i> Mart. ex Zucc. (Oxalidaceae)

description: Sequence alignment matrices used in the phylogenetic analyses of Fiaschi et al.: Updating the taxonomy of polymorphic plant taxa: six Atlantic Forest species segregated from the widely circumscribed <i>Oxalis polymorpha</i> Mart. ex Zucc. (Oxalidaceae)Individual matrices from ITS, trnL-trnF and petA-psbJ markers; concatenated matrix with all three markers together.Files in fasta format.
DOI: 10.15468/dl.vajmvb
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Material sample, Specimen, Occurrence evidence)",
 "Continent is North America",
 "Country is one of (Guatemala, Mexico)",
 "OccurrenceStatus is Present",
 "PublishingOrg is one of (bc092ff0-02e4-11dc-991f-b8a03c50a862, ccd1ddc0-6c21-11de-8224-b8a03c50a862, 6ea87510-0561-11d8-b851-b8a03c50a862, 7b8aff00-a9f8-11d8-944b-b8a03c50a862, b4640710-8e03-11d8-b956-b8a03c50a862, b554c320-0560-11d8-b851-b8a03c50a862)",
 "TaxonKey is Tayassu pecari (Link, 1795)"
 ]
}

 The dataset includes 71 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010632-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uuhqxv
title: Occurrence Download

description: A dataset containing 171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cuscuta psorothamnensis Stefanovic, M.A.García & Costea",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 171 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010633-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14007748
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Helga Pittoni-Dannenfeldt, http://www.wikidata.org/entity/Q110552887. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q110552887
DOI: 10.5281/zenodo.14007749
title: Natural history specimens collected and/or identified and deposited.

description: Natural history specimen data collected and/or identified by Helga Pittoni-Dannenfeldt, http://www.wikidata.org/entity/Q110552887. Claims or attributions were made on Bionomia, https://bionomia.net using specimen data from the Global Biodiversity Information Facility, https://gbif.org.
description: http://www.wikidata.org/entity/Q110552887
DOI: 10.5281/zenodo.13990404
title: Roadmapping information for each Wider Uptake case study

description: Database summarizing information for each roadmapping step and for each of the WIDER UPTAKE H2020 project's case studies
DOI: 10.5281/zenodo.13990405
title: Roadmapping information for each Wider Uptake case study

description: Database summarizing information for each roadmapping step and for each of the WIDER UPTAKE H2020 project's case studies
DOI: 10.5066/p132ojpa
title: USGS National and Global Oil and Gas Assessment Project—Norphlet Formation: Assessment Unit Boundaries, Assessment Input Data, and Fact Sheet Data Tables

description: This data release contains the boundaries of assessment units, assessment input data, and resulting fact sheet data tables for the assessment of undiscovered oil and gas resources in the Norphlet Formation of the Western Gulf Basin Province, U.S. Gulf Coast Region. The assessment unit is the fundamental unit used in the National and Global Oil and Gas Assessment Project for the assessment of undiscovered oil and gas resources. The assessment unit is defined within the context of the higher-level total petroleum system. The assessment unit is shown herein as a geographic boundary interpreted, defined, and mapped by the geologist responsible for the province and incorporates a set of known or postulated oil and (or) gas accumulations sharing similar geologic, geographic, and temporal properties within the total petroleum system, such as source rock, timing, migration pathways, trapping mechanism, and hydrocarbon type. The assessment unit boundary is defined geologically as the limits of the geologic elements that define the assessment unit, such as limits of reservoir rock, geologic structures, source rock, and seal lithologies. The only exceptions to this are assessment units that border a Federal-State water boundary. In these cases, the Federal-State water boundary forms part of the assessment unit boundary. In addition to the shapefile, for U.S. assessments, allocation tables are provided that enumerate percentages assigned to various land categories. Machine-readable tables are provided that contain the input and results for each assessment unit summarized in the U.S. Geological Survey (USGS) Fact Sheet. Methodology of assessments are documented in USGS Data Series 547 for continuous assessments (https://pubs.usgs.gov/ds/547) and USGS DDS69-D, Chapter 21 for conventional assessments (https://pubs.usgs.gov/dds/dds-069/dds-069-d/REPORTS/69_D_CH_21.pdf). See supplemental information for a detailed list of files included this data release.
DOI: 10.15468/dl.dzgbuc
title: Occurrence Download

description: A dataset containing 104 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cuscuta veatchii Brandegee",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 104 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010637-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bmja4q
title: Occurrence Download

description: A dataset containing 1573 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is MEX.25_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Pandionidae"
 ]
}

 The dataset includes 1573 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010642-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vu6rk6
title: Occurrence Download

description: A dataset containing 5546 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Elodea densa (Planch.) Casp., Koenigia polystachya (Wall. ex Meisn.) T.M.Schust. & Reveal, Hydrocharis laevigata (Humb. & Bonpl. ex Willd.) Byng & Christenh.)",
 "BasisOfRecord is one of (Observation, Human Observation, Material sample, Specimen, Unknown evidence, Machine Observation, Occurrence evidence)",
 "Year is greater than or equal to 1971",
 "Year is less than or equal to 2010",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5546 records from 350 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010638-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e8wnsa
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Parnassius apollo (Linnaeus, 1758)",
 "Year 2010-2025"
 ]
}

 The dataset's 1 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000012-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14748722
title: Plasmon assisted generation of solvated electrons from low work function scandium oxide and their utilization for enhanced nitrogen reduction
DOI: 10.5281/zenodo.14748723
title: Plasmon assisted generation of solvated electrons from low work function scandium oxide and their utilization for enhanced nitrogen reduction
DOI: 10.15468/dl.y9av6j
title: Occurrence Download

description: A dataset containing 6105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Chrysocephalum apiculatum",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 6105 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021463-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14878568
title: All data of MARCOVul

description: Data files include two zip files: dataset.zip and AllData.zip. Where AllData.zip includes everything in dataset.zip.

dataset.zip

dataset.zip includes only raw data and derived data, excluding intermediate data and model data.

AllData.zip

The AllData folder structure is the same as the code folder structure.

The dataset folder contains:





DiverseVul: The original dataset. Among them, diversevul_20230702.json is the obtained raw data, while train.jsonl, valid.jsonl, and test.jsonl are the randomly split training, validation, and testing sets.




DiverseVul-Derived: The dataset after data derivation. Among them, allData.jsonl contains all the data with verified functions before data derivation, while train.jsonl, valid.jsonl, and test.jsonl are the training, validation, and testing sets after data derivation.



The joern/data folder contains all generated intermediate structure data:





DiverseVul-Derived: Data after intermediate structure generation.




DiverseVul-Derived-enhance: Data after data augmentation.




DiverseVul-Derived-simplify: Data after data simplification.




DiverseVul-Derived-simplify-enhance: Data after both data simplification and data augmentation.



The MultiFCode/LanguageModel folder contains:





pre-model: The raw language models.




saved_models: The language models fine-tuned on the training set.



 

If this dataset has been helpful for your research, please consider citing our paper.



@article{zhang2025real,  title={Real-World Code Vulnerability Detection Framework: From Data Preprocessing to Multi-Feature Fusion Detection},  author={Zhang, Jixian and Du, Qingfeng and Li, Sheng and Lu, Zhongda and He, Ting and Liu, Chengwei},  journal={IEEE Transactions on Dependable and Secure Computing},  year={2025},  publisher={IEEE}}
DOI: 10.5281/zenodo.14878567
title: All data of MARCOVul

description: Data files include two zip files: dataset.zip and AllData.zip. Where AllData.zip includes everything in dataset.zip.

dataset.zip

dataset.zip includes only raw data and derived data, excluding intermediate data and model data.

AllData.zip

The AllData folder structure is the same as the code folder structure.

The dataset folder contains:





DiverseVul: The original dataset. Among them, diversevul_20230702.json is the obtained raw data, while train.jsonl, valid.jsonl, and test.jsonl are the randomly split training, validation, and testing sets.




DiverseVul-Derived: The dataset after data derivation. Among them, allData.jsonl contains all the data with verified functions before data derivation, while train.jsonl, valid.jsonl, and test.jsonl are the training, validation, and testing sets after data derivation.



The joern/data folder contains all generated intermediate structure data:





DiverseVul-Derived: Data after intermediate structure generation.




DiverseVul-Derived-enhance: Data after data augmentation.




DiverseVul-Derived-simplify: Data after data simplification.




DiverseVul-Derived-simplify-enhance: Data after both data simplification and data augmentation.



The MultiFCode/LanguageModel folder contains:





pre-model: The raw language models.




saved_models: The language models fine-tuned on the training set.



 

If this dataset has been helpful for your research, please consider citing our paper.



@article{zhang2025real,  title={Real-World Code Vulnerability Detection Framework: From Data Preprocessing to Multi-Feature Fusion Detection},  author={Zhang, Jixian and Du, Qingfeng and Li, Sheng and Lu, Zhongda and He, Ting and Liu, Chengwei},  journal={IEEE Transactions on Dependable and Secure Computing},  year={2025},  publisher={IEEE}}
DOI: 10.34740/kaggle/dsv/13115507
title: World Weather Repository ( Daily Updating )
DOI: 10.15468/dl.5jj7pt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bromus danthoniae",
 "Country is Denmark",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021466-250914085247600/datasets/export for details.
DOI: 10.15468/dl.fhba3w
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bromus danthoniae",
 "Country is France",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021467-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eeukps
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bromus danthoniae",
 "Country is Japan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021468-250914085247600/datasets/export for details.
DOI: 10.15468/dl.qq63zc
title: Occurrence Download

description: A dataset containing 250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Chrysopsis mariana",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 250 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021469-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17149438
title: Supplementary material

description: This record contains supplementary data and model checkpoints for anonymous review.
DOI: 10.15468/dl.pz38k6
title: Occurrence Download

description: A dataset containing 600 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "Geometry POLYGON((102.22766 24.4107,103.19625 24.4107,103.19625 25.67826,102.22766 25.67826,102.22766 24.4107))",
 "TaxonKey is one of (Solenopsis invicta, Chroicocephalus ridibundus, Lithobates catesbeianus)"
 ]
}

 The dataset includes 600 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021470-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17164312
title: ЭЛЕКТРОХИМИЧЕСКОЕ ПОВЕДЕНИЕ Н-ВИНИЛПИПЕРИДИНА
DOI: 10.5281/zenodo.17164313
title: ЭЛЕКТРОХИМИЧЕСКОЕ ПОВЕДЕНИЕ Н-ВИНИЛПИПЕРИДИНА
DOI: 10.15468/dl.wmyp6u
title: Occurrence Download

description: A dataset containing 915 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Chylismia claviformis",
 "Year is less than or equal to 2000",
 "Year is greater than or equal to 1970",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 915 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021471-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.en7m69
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bromus danthoniae",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021472-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17164084
title: Genetic basis of immunity in Indian cattle as revealed by comparative analysis of Bos genome

description: This repository contains the genomic variants, such as single-nucleotide variations (SNV), insertions, and deletions identified by the GATK tool associated with the manuscript titled "Genetic basis of immunity in Indian cattle as revealed by comparative analysis of the Bos genome", submitted to Scientific Reports. The data represent genomic variations identified in Bos indicus (Nelore breed, n=14) and Bos indicus (Gir breed, n=20) with a focus on identifying genomic variation located on the immune-related genes, on the basis that indicine cattle have inherent disease resistance capability compared to taurine cattle (Exotic breed). 

File InformationFormat: Annotated variant data in CSV formatData Source: The whole-genome sequence data were retrieved from the NCBI Sequence Read Archive (SRA) for the Nelore (n=14) and Gir (n=20) breeds Variant identification: Variants were identified using GATKAnnotation: Variants were annotated using SnpEff
DOI: 10.5281/zenodo.17164085
title: Genetic basis of immunity in Indian cattle as revealed by comparative analysis of Bos genome

description: This repository contains the genomic variants, such as single-nucleotide variations (SNV), insertions, and deletions identified by the GATK tool associated with the manuscript titled "Genetic basis of immunity in Indian cattle as revealed by comparative analysis of the Bos genome", submitted to Scientific Reports. The data represent genomic variations identified in Bos indicus (Nelore breed, n=14) and Bos indicus (Gir breed, n=20) with a focus on identifying genomic variation located on the immune-related genes, on the basis that indicine cattle have inherent disease resistance capability compared to taurine cattle (Exotic breed). 

File InformationFormat: Annotated variant data in CSV formatData Source: The whole-genome sequence data were retrieved from the NCBI Sequence Read Archive (SRA) for the Nelore (n=14) and Gir (n=20) breeds Variant identification: Variants were identified using GATKAnnotation: Variants were annotated using SnpEff
DOI: 10.15468/dl.v2m84s
title: Occurrence Download

description: A dataset containing 1588 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tulipa biflora"
 ]
}

 The dataset includes 1588 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021473-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yhccz7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bromus diandrus",
 "Country is Belarus",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021475-250914085247600/datasets/export for details.