cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/7z4x2-q2518
title: Agro C58 22C plate 16h

description: Raw data files of Agro C58 22C plate 16h
description: <strong>Tilt Series Date:</strong> 2014-11-10</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown at 22C and induced for T pili on a 2% agarose pad for 16 hours</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-11-10-11/rawdata/</p>c58_22C_pl_16h0011.mrc,  Tilt Series (Pixel Size 0.5 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-11-10-11/rawdata/c58_22C_pl_16h0011.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.yrbyv6
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pholiurus pannonicus",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013775-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/1xgec-jxk46
title: A22-treated wild type

description: Raw data files of A22-treated wild type
description: <strong>Tilt Series Date:</strong> 2009-07-26</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 190.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR Peach</p>
<strong>Collaborators and Roles:</strong> Cell culture and treatment by Zhuo Li. Data collected by Zhuo Li. Processed by Zhuo Li. </p>
<strong>Purification / Growth Conditions / Treatment:</strong> Exponentially growing NA1000 cells were treated with 10 ug/ml A22 for 2 hours before freezing. </p>
<strong>Sample Preparation:</strong> 10 nm gold. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-07-26-15/rawdata/</p>09jul26c_A22wt_015.mrc,  Tilt Series (Pixel Size 1.2 nm), 989.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-07-26-15/rawdata/09jul26c_A22wt_015.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/tzmgz-m3e91
title: GFP-MreB fusion methanol control

description: Raw data files of GFP-MreB fusion methanol control
description: <strong>Tilt Series Date:</strong> 2009-08-01</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, REACH</p>
<strong>Collaborators and Roles:</strong> Experiments were done by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> The GFP-MreB-expressing NA1000 cells were cultured to exponential phase and treated with methanol as a control.</p>
<strong>Sample Preparation:</strong> 10 nm gold.</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-08-01-65/rawdata/</p>09aug01a_methanolgfmr1_065.mrc,  Tilt Series (Pixel Size 1.2 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-08-01-65/rawdata/09aug01a_methanolgfmr1_065.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/13ra4-mgs13
title: Agro VirB8-GFP

description: Raw data files of Agro VirB8-GFP
description: <strong>Tilt Series Date:</strong> 2013-10-03</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
<strong>Purification / Growth Conditions / Treatment:</strong> cells were grown in liquid at 19C and induced with 200uM AS for 24 hours</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-10-03-1/rawdata/</p>virb8_24h_2750002.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-10-03-1/rawdata/virb8_24h_2750002.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/drv7e-nqx36
title: Idiomarina_09jun23b_grid5_011

description: Raw data files of Idiomarina_09jun23b_grid5_011
description: <strong>Tilt Series Date:</strong> 2009-06-23</p>
<strong>Data Taken By:</strong> Morgan Beeby</p>
<strong>Species / Specimen:</strong> Idiomarina loihiensis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.5°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: 12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> grown by Bonniedata collected by Morganprocessed by Bonnie</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in marine broth and agar</p>
<strong>Sample Preparation:</strong> nute glow discharge on Cressington glow discharger, C-flat grids, 10 nm gold fiducials, "MORGAN3" Vitrobot settings</p>
  mba2009-06-23-8_slicer5616.jpg: Extracellular Vesicle mba2009-06-23-8_slicer5617.jpg: Filament mba2009-06-23-8_slicer5619.jpg: Peptidoglycan
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-06-23-8/3dimage_5325/</p>09jun23b_grid5_011.mrc.rec,  Reconstruction (Pixel Size 1.9 nm), 219.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mba2009-06-23-8/3dimage_5325/09jun23b_grid5_011.mrc.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ymkxs-2fy39
title: #4-60 BaxH6 Lysogen Ecoli phage

description: Bax delta H6 bigger hole Bax mutantBaxH6 Lysogen Ecoli lamdaphageMC4100[lamdadelta (SR)]
description: <strong>Tilt Series Date:</strong> 2013-07-12</p>
<strong>Data Taken By:</strong> Alasdair McDowall</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> raptor failed</p>
<strong>Collaborators and Roles:</strong> Xo Luo and Xiaming Pang  xuluo@unmc.edu</p>
<strong>Purification / Growth Conditions / Treatment:</strong> see Xiamings notes</p>
<strong>Sample Preparation:</strong> Titan 26k 7/11/13  expo 0.9 150e- poor fudicials</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/amw2013-07-12-2/rawdata/</p>B1_4-600002.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/amw2013-07-12-2/rawdata/B1_4-600002.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/01gaa-b0v47
title: liposomes + 0.5uL CdvA

description: tetraether liposomes from Sulfolobus cells + 0.5uL CdvA
description: <strong>Tilt Series Date:</strong> 2011-08-04</p>
<strong>Data Taken By:</strong> Megan Dobro</p>
<strong>Species / Specimen:</strong> tetraether liposomes + CdvA</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-61.0°, 61.0°), step: 1°, constant angular increment, dosage: 8.0 eV/Å²,  defocus: -5.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> sent by Rachel Samson at Oxford University, purified by Parkson Lee-Gau Chong at Temple University</p>
<strong>Purification / Growth Conditions / Treatment:</strong> heavy vortexing for 10 mins at 80 C</p>
<strong>Sample Preparation:</strong> prepared by Parkson Lee-Gau Chong</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mdj2011-08-04-1/rawdata/</p>liposomes05uLcdvA_34000x0001.mrc,  Tilt Series (Pixel Size 7.74 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mdj2011-08-04-1/rawdata/liposomes05uLcdvA_34000x0001.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/n1h2p-98205
title: #1-60 BaxH6 Lysogen Ecoli phage

description: Bax/Holin negative controlBaxH6 Lysogen Ecoli lamdaphageMC4100[lamdadelta(SR)]
description: <strong>Tilt Series Date:</strong> 2013-07-11</p>
<strong>Data Taken By:</strong> Alasdair McDowall</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> Undefined</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Xu Luo and Xiaming Pangxuluo@unmc.edu</p>
<strong>Purification / Growth Conditions / Treatment:</strong> see Xiaming notes</p>
<strong>Sample Preparation:</strong> Titan 26k, 7/10/13expo 0.9  150e-poor fuducials</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/amw2013-07-11-20/rawdata/</p>1-600019.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/amw2013-07-11-20/rawdata/1-600019.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/yaz83-f6206
title: MT310_xyl(+)_AuCl2uM(+)

description: Raw data files of MT310_xyl(+)_AuCl2uM(+)
description: <strong>Tilt Series Date:</strong> 2009-06-14</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach</p>
<strong>Collaborators and Roles:</strong> The MT310 strain was constructed by Martin Thanbichler; Cells cultured and treated by Zhuo Li; Data collected and processed by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MT310 cells were induced with xylose and treated with 2 uM CdCl2 for 20 hours.</p>
<strong>Sample Preparation:</strong> 10 nm gold.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-14-26/rawdata/</p>09jun14a_Cd2a_026.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-14-26/rawdata/09jun14a_Cd2a_026.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/fz62r-2y466
title: Hylemonella gracilis

description: Hylemonella gracilis.  The rest of the files are in ~/Images/060816.  This date's files are not good enough for motor averaging.
description: <strong>Tilt Series Date:</strong> 2006-08-16</p>
<strong>Data Taken By:</strong> Gavin Murphy</p>
<strong>Species / Specimen:</strong> Hylemonella gracilis</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod, bsoft</p>
<strong>Collaborators and Roles:</strong> Cells provided by Jared Leadbetter; Data collected and processed by Gavin Murphy</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown in dilute media without salt.  0.5 g/L of Tryptone, 0.5 g/L YE. Cells grown for 2 days.  OD never gets above 0.005.  Centrifuged lightly, then concentrated 100x fold.</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2006-08-16-4/rawdata/</p>S10_S474G3_90e10d22k.mrc,  Tilt Series (Pixel Size 0.98 nm), 931.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2006-08-16-4/rawdata/S10_S474G3_90e10d22k.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/sh6yf-g6v80
title: Helicobacter

description: T4SS search
description: <strong>Tilt Series Date:</strong> 2007-11-14</p>
<strong>Data Taken By:</strong> Megan Dobro</p>
<strong>Species / Specimen:</strong> Helicobacter hepaticus</p>
<strong>Strain:</strong> ATCC 51449</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-68.0°, 62.0°), step: 1 degree increment, cos°, constant angular increment, dosage: 2278.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Janet Chow, Mazmanian Lab; prepared Helicobacter</p>
<strong>Purification / Growth Conditions / Treatment:</strong> WT grown with host for 1 day</p>
<strong>Sample Preparation:</strong> R 2/1 quantifoil grids, 10 nm gold, 100% humidity, box 641</p>
  mdj2007-11-14-2_slicer4489.jpg: Granules mdj2007-11-14-2_slicer4568.jpg: Unknown
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mdj2007-11-14-2/3dimage_2938/</p>hh07nov14t03_full.rec,  Reconstruction (Pixel Size 15.64 nm), 157.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mdj2007-11-14-2/3dimage_2938/hh07nov14t03_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/25pax-qm003
title: Hylemonella gracilis

description: Hylemonella gracilis.  The rest of the files are in ~/Images/060816.  This date's files are not good enough for motor averaging.
description: <strong>Tilt Series Date:</strong> 2006-08-16</p>
<strong>Data Taken By:</strong> Gavin Murphy</p>
<strong>Species / Specimen:</strong> Hylemonella gracilis</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod, bsoft</p>
<strong>Collaborators and Roles:</strong> Cells provided by Jared Leadbetter; Data collected and processed by Gavin Murphy</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown in dilute media without salt.  0.5 g/L of Tryptone, 0.5 g/L YE. Cells grown for 2 days.  OD never gets above 0.005.  Centrifuged lightly, then concentrated 100x fold.</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2006-08-16-3/rawdata/</p>S8_S474G3_90e10d18k.mrc,  Tilt Series (Pixel Size 0.98 nm), 931.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2006-08-16-3/rawdata/S8_S474G3_90e10d18k.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mfz9s-ryc51
title: Helicobacter

description: T4SS search
description: <strong>Tilt Series Date:</strong> 2007-11-06</p>
<strong>Data Taken By:</strong> Megan Dobro</p>
<strong>Species / Specimen:</strong> Helicobacter hepaticus</p>
<strong>Strain:</strong> ATCC 51449</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-67.0°, 59.0°), step: 1 degree increment, cos°, constant angular increment, dosage: 2278.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Janet Chow, Mazmanian Lab; prepared Helicobacter</p>
<strong>Purification / Growth Conditions / Treatment:</strong> WT grown in culture and centrifuged to pellet</p>
<strong>Sample Preparation:</strong> R 2/1 quantifoil grids, 10 nm gold, 100% humidity, box 463</p>
  mdj2007-11-06-1_slicer4330.jpg: Chemoreceptor array .  flagellar motor mdj2007-11-06-1_slicer4335.jpg: Flagellar motor .  Unsheathed flagellum
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mdj2007-11-06-1/3dimage_2942/</p>hh07nov06t01_bc_full.rec,  Reconstruction (Pixel Size 15.64 nm), 146.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mdj2007-11-06-1/3dimage_2942/hh07nov06t01_bc_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6e68a-jqm75
title: Caulobacter crescentus

description: wild type CB15N. 2nd of 2; no processed files . caulobacter 30 min post-synchrony
description: <strong>Tilt Series Date:</strong> 2005-04-08</p>
<strong>Data Taken By:</strong> Prabha Dias</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 0.5°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> </p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> none</p>
<strong>Collaborators and Roles:</strong> specimen prep: DPD & AB, data collection: DPD; processed by AB?</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase, synchronized, 30 minutes post-synch, PYE media</p>
<strong>Sample Preparation:</strong> box #430, grid #2; Quantifoil R2/2, 10nm gold, 100% humidity, -1 offset, 1 sec blot, 1 sec drain</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-08-2/rawdata/</p>CC05Apr08e200t02.mrc,  Tilt Series (Pixel Size 1.2 nm), 2.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/pdd2005-04-08-2/rawdata/CC05Apr08e200t02.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/my6r6-b4s34
title: Hylemonella gracilis

description: Hylemonella gracilis.  The rest of the files are in ~/Images/060816.  This date's files are not good enough for motor averaging.
description: <strong>Tilt Series Date:</strong> 2006-08-16</p>
<strong>Data Taken By:</strong> Gavin Murphy</p>
<strong>Species / Specimen:</strong> Hylemonella gracilis</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -10.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod, bsoft</p>
<strong>Collaborators and Roles:</strong> Cells provided by Jared Leadbetter; Data collected and processed by Gavin Murphy</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown in dilute media without salt.  0.5 g/L of Tryptone, 0.5 g/L YE. Cells grown for 2 days.  OD never gets above 0.005.  Centrifuged lightly, then concentrated 100x fold.</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2006-08-16-2/rawdata/</p>S9_S474G3_90e10d18k.mrc,  Tilt Series (Pixel Size 0.98 nm), 931.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2006-08-16-2/rawdata/S9_S474G3_90e10d18k.mrc"
        > <i class="download icon"></i> Download </a></p>