cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.sdvzha
title: Occurrence Download

description: A dataset containing 168 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus uxoris McVaugh"
 ]
}

 The dataset includes 168 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004343-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.deyv76
title: Occurrence Download

description: A dataset containing 189 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Cypripedium flavum P.F.Hunt & Summerh."
 ]
}

 The dataset includes 189 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052800-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mjfy7z
title: Occurrence Download

description: A dataset containing 7547 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Octoblepharum albidum Hedw."
 ]
}

 The dataset includes 7547 records from 138 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0048917-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vb5gp4
title: Occurrence Download

description: A dataset containing 406640 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "StateProvince is one of (santander)"
 ]
}

 The dataset includes 406640 records from 452 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061011-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ywg5am
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chile",
 "HasCoordinate is true",
 "TaxonKey is Lasiurus varius (Poeppig, 1835)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 15 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004343-190307172214381/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11434921
title: ELITE SLWR: global 1km daily SLDR at SIN Grid   (2015_001-059)

description: The Essential thermal Infrared remoTe sEnsing (ELITE) product suite currently has four types of products, including land surface temperature (LST: clear-sky and all-sky), emissivity (NBE: narrowband emissivity; BBE: broadband emissivity; and spectral emissivity), the component of surface radiation and energy budget (SLUR: surface longwave upwelling radiation; SLDR: surface longwave downward radiation SLDR; SLNR: surface longwave net radiation), and the component of Earth’s radiation budget (OLR; outgoing longwave radiation; RSR: reflected solar radiation). The spatial-temporal resolutions of the ELITE products are mainly determined by the employed satellite data sources. For more information about ELITE products, please refer to the website (https://elite.bnu.edu.cn).

 

This dataset is ELITE daily surface longwave downward radiation (SLDR) product at 1km spatial resolution. It is provided on a Sinusoidal grid and ranges from 2000 to 2022 (continuously updated). This dataset was generated from the ELITE surface longwave downward radiation (SLDR) product using the algorithms developed by Zeng et al. (2021).

 

This is the ELITE Daily SLDR product in 2015 (DOY: 001-059). Please click here to download the ELITE Daily SLDR product in 2015 (DOY: 060-120).

Dataset Characteristics:



Spatial Coverage: Global

Temporal Coverage: 2015-01-01 ~ 2015-02-28

Spatial Resolution: 1 km

Temporal Resolution: Daily

Data Format: h5

Projection: Sinusoidal

Scale: 0.05

Offset: -1000

Fill value: 999


 

Citation (Please cite these papers when using the data):



Zeng, Q., & Cheng, J. (2021). Estimating high-spatial resolution surface daily longwave radiation from the instantaneous Global LAnd Surface Satellite (GLASS) longwave radiation product. International Journal of Digital Earth, 14(11), 1674-1704.
DOI: 10.5281/zenodo.11434920
title: ELITE SLWR: global 1km daily SLDR at SIN Grid   (2015_001-059)

description: The Essential thermal Infrared remoTe sEnsing (ELITE) product suite currently has four types of products, including land surface temperature (LST: clear-sky and all-sky), emissivity (NBE: narrowband emissivity; BBE: broadband emissivity; and spectral emissivity), the component of surface radiation and energy budget (SLUR: surface longwave upwelling radiation; SLDR: surface longwave downward radiation SLDR; SLNR: surface longwave net radiation), and the component of Earth’s radiation budget (OLR; outgoing longwave radiation; RSR: reflected solar radiation). The spatial-temporal resolutions of the ELITE products are mainly determined by the employed satellite data sources. For more information about ELITE products, please refer to the website (https://elite.bnu.edu.cn).

 

This dataset is ELITE daily surface longwave downward radiation (SLDR) product at 1km spatial resolution. It is provided on a Sinusoidal grid and ranges from 2000 to 2022 (continuously updated). This dataset was generated from the ELITE surface longwave downward radiation (SLDR) product using the algorithms developed by Zeng et al. (2021).

 

This is the ELITE Daily SLDR product in 2015 (DOY: 001-059). Please click here to download the ELITE Daily SLDR product in 2015 (DOY: 060-120).

Dataset Characteristics:



Spatial Coverage: Global

Temporal Coverage: 2015-01-01 ~ 2015-02-28

Spatial Resolution: 1 km

Temporal Resolution: Daily

Data Format: h5

Projection: Sinusoidal

Scale: 0.05

Offset: -1000

Fill value: 999


 

Citation (Please cite these papers when using the data):



Zeng, Q., & Cheng, J. (2021). Estimating high-spatial resolution surface daily longwave radiation from the instantaneous Global LAnd Surface Satellite (GLASS) longwave radiation product. International Journal of Digital Earth, 14(11), 1674-1704.
DOI: 10.15468/dl.mmehbw
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "OccurrenceStatus is Present",
 "TaxonKey is Hypotrachyna sinuosa (Sm.) Hale"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083629-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.os8irj
title: Occurrence Download

description: A dataset containing 4449 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Field Museum of Natural History (Zoology) Mammal Collection",
 "TaxonKey is Myotis Kaup, 1829"
 ]
}

 The dataset includes 4449 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027171-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q6erzf
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nordenstamia longistyla (Greenm. & Cuatrec.) B.Nord."
 ]
}

 The dataset includes 13 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026588-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rmajzf
title: Occurrence Download

description: A dataset containing 15209 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Smilisca baudinii (Duméril & Bibron, 1841)"
 ]
}

 The dataset includes 15209 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0083229-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5f8sxe
title: Occurrence Download

description: A dataset listing the 6 species recorded in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 {
 "or" : [
 "TaxonKey is Ulmus rubra hort. ex Loudon",
 "TaxonKey is Ulmus rubra hort.",
 "TaxonKey is Ulmus rubra F.Michx.",
 "TaxonKey is Ulmus rubra Muhl.",
 "TaxonKey is Ulmus rubra f. laevis F.Seym."
 ]
 }
 ]
}

 The dataset's 6 records were derived from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061008-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vretgv
title: Occurrence Download

description: A dataset containing 335 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hunteria zeylanica (Retz.) Gardner ex Thwaites"
 ]
}

 The dataset includes 335 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005980-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6w9r9p
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Taxus calcicola L.M.Gao & Möller"
 ]
}

 The dataset includes 30 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027715-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bzczit
title: Occurrence Download

description: A dataset containing 1175 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eleutherodactylus cystignathoides (Cope, 1877)"
 ]
}

 The dataset includes 1175 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005980-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7k9uze
title: Occurrence Download

description: A dataset containing 364 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((7.74349 45.09361,7.74198 45.1099,7.73326 45.12771,7.72644 45.1478,7.70597 45.14856,7.6821 45.1459,7.66618 45.1387,7.65216 45.12392,7.64723 45.11293,7.64117 45.09247,7.62601 45.083,7.62525 45.07087,7.62298 45.05306,7.62412 45.04169,7.63662 45.03449,7.63018 45.02084,7.60289 45.02691,7.59873 45.01743,7.62033 45.00758,7.61616 44.99583,7.63549 44.98636,7.66883 45.0072,7.68513 45.01289,7.70446 45.01857,7.71317 45.01592,7.7253 45.0288,7.7488 45.04586,7.76661 45.06859,7.77343 45.0758,7.76396 45.08337,7.74349 45.09361))",
 "TaxonKey is one of (Lepidoptera, Tachinidae, Crabronidae, Sphecidae, Ampulicidae)"
 ]
}

 The dataset includes 364 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027716-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f8eqs0
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Kuwait",
 "Country is Saudi Arabia"
 ]
 },
 "TaxonKey is Launaea capitata (Spreng.) Dandy"
 ]
}

 The dataset includes 18 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005980-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vn55d4
title: Occurrence Download

description: A dataset containing 1591 species occurrences available in GBIF matching the query:
{
 "ScientificName" : [
 "is Pappea capensis Eckl. & Zeyh."
 ]
}

 The dataset includes 1591 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027712-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mcqsxl
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyphocharax gouldingi Vari, 1992"
 ]
}

 The dataset includes 88 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005981-160509122628363/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.98nvsv
title: Occurrence Download

description: A dataset containing 11582035 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Berberidopsidales",
 "TaxonKey is Caryophyllales",
 "TaxonKey is Celastrales",
 "TaxonKey is Buxales",
 "TaxonKey is Chloranthales",
 "TaxonKey is Ceratophyllales",
 "TaxonKey is Crossosomatales",
 "TaxonKey is Cucurbitales",
 "TaxonKey is Bruniales",
 "TaxonKey is Canellales",
 "TaxonKey is Cornales"
 ]
}

 The dataset includes 11582035 records from 1736 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005981-160526112335914/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/hvn28c
title: Basilia: a new genus to the Albanian bat fly fauna (Diptera: Nycteribiidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Szentiványi, Tamara, Genzoni, Eléonore, Clément, Laura, Radonjić, Marina, Loce, Ervis, Théou, Philippe, Glaizot, Olivier, Christe, Philippe (2016): Basilia: a new genus to the Albanian bat fly fauna (Diptera: Nycteribiidae). Ecologica Montenegrina 8: 58-61, DOI: 10.37828/em.2016.8.8, URL: https://www.biotaxa.org/em/article/view/em.2016.8.8
DOI: 10.15468/nzqc9z
title: A new species of Pterotiltus Karsch (Orthoptera, Acrididae, Oxyinae) from Equatorial Guinea

description: This dataset contains the digitized treatments in Plazi based on the original journal article Oumarou-Ngoute, Charly, Song, Hojun, Mariño-Pérez, Ricardo, Woo, Brandon M., Linde, Jackson, Rowell, C. H. F. (2025): A new species of Pterotiltus Karsch (Orthoptera, Acrididae, Oxyinae) from Equatorial Guinea. Journal of Orthoptera Research 34 (2): 201-212, DOI: 10.3897/jor.34.141073AbstractThe genus Pterotiltus Karsch, 1893 currently contains 18 described species. The genus is distributed in West, Central, and East Africa from Ghana to the Congo basin as far as Western Uganda. Pterotiltus bioko sp. nov. is described from specimens recently collected on Bioko Island in Equatorial Guinea. A key to Pterotiltus species is provided.
DOI: 10.15468/gmtjyr
title: Two new species of the genus Comibaena Hübner, 1823 (Lepidoptera: Geometridae) from China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Pan, Zhaohui, Xian, Chunlan, Han, Hongxiang (2022): Two new species of the genus Comibaena Hübner, 1823 (Lepidoptera: Geometridae) from China. Zootaxa 5190 (1): 147-150, DOI: 10.11646/zootaxa.5190.1.8
DOI: 10.5281/zenodo.14499688
title: VIRALERT - Environmental-based epidemiology for preparedness and early detection of viral epidemics
title: Influenza Wastewater Dataset

description: VIRALERT Project - Environmental-based epidemiology for preparedness and early detection of viral epidemics

The dataset Flu presents the results of influenza national-wide wastewater monitoring efforts in Luxembourg through the sampling of 4 different wastewater treatment plants across the country from March 2020 to 2024. Two different detection and quantification methods were used: RT-qPCR and RT-ddPCR
DOI: 10.5281/zenodo.14808737
title: Angulation and curvature of aortic landing zone affect implantation depth in transcatheter aortic valve implantation

description: Abstract



In transcatheter aortic valve implantation (TAVI), final device position may be affected by device interaction with the whole aortic landing zone (LZ) extending to ascending aorta. We investigated the impact of aortic LZ curvature and angulation on TAVI implantation depth, comparing short-frame balloon-expanding (BE) and long-frame self-expanding (SE) devices. Patients (n = 202) treated with BE or SE devices were matched based on one-to-one propensity score. Primary endpoint was the mismatch between the intended (HPre) and the final (HPost) implantation depth. LZ curvature and angulation were calculated based on the aortic centerline trajectory available from pre-TAVI computed tomography. Total LZ curvature ( kLZ,totkLZ,tot ) and LZ angulation distal to aortic annulus ( αLZ,DistalαLZ,Distal ) were greater in the SE compared to the BE group (P < 0.001 for both). In the BE group, HPost was significantly higher than HPre at both cusps (P < 0.001). In the SE group, HPost was significantly deeper than HPre only at the left coronary cusp (P = 0.013). At multivariate analysis, αLZ,DistalαLZ,Distal was the only independent predictor (OR = 1.11, P = 0.002) of deeper final implantation depth with a cut-off value of 17.8°. Aortic LZ curvature and angulation significantly affected final TAVI implantation depth, especially in high stent-frame SE devices reporting, upon complete release, deeper implantation depth with respect to the intended one.
DOI: 10.5281/zenodo.14808738
title: Angulation and curvature of aortic landing zone affect implantation depth in transcatheter aortic valve implantation

description: Abstract



In transcatheter aortic valve implantation (TAVI), final device position may be affected by device interaction with the whole aortic landing zone (LZ) extending to ascending aorta. We investigated the impact of aortic LZ curvature and angulation on TAVI implantation depth, comparing short-frame balloon-expanding (BE) and long-frame self-expanding (SE) devices. Patients (n = 202) treated with BE or SE devices were matched based on one-to-one propensity score. Primary endpoint was the mismatch between the intended (HPre) and the final (HPost) implantation depth. LZ curvature and angulation were calculated based on the aortic centerline trajectory available from pre-TAVI computed tomography. Total LZ curvature ( kLZ,totkLZ,tot ) and LZ angulation distal to aortic annulus ( αLZ,DistalαLZ,Distal ) were greater in the SE compared to the BE group (P < 0.001 for both). In the BE group, HPost was significantly higher than HPre at both cusps (P < 0.001). In the SE group, HPost was significantly deeper than HPre only at the left coronary cusp (P = 0.013). At multivariate analysis, αLZ,DistalαLZ,Distal was the only independent predictor (OR = 1.11, P = 0.002) of deeper final implantation depth with a cut-off value of 17.8°. Aortic LZ curvature and angulation significantly affected final TAVI implantation depth, especially in high stent-frame SE devices reporting, upon complete release, deeper implantation depth with respect to the intended one.
DOI: 10.15468/dl.szct46
title: Occurrence Download

description: A dataset containing 124 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Brassica juncea (L.) Coss."
 ]
}

 The dataset includes 124 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015139-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uq7hud
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lonchocarpus molinae Standl. & L.O.Williams)",
 "BasisOfRecord is one of (Human Observation, Observation, Living Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Continent is North America"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015140-250127130748423/datasets/export for details.
DOI: 10.5281/zenodo.14177729
title: HTSinfer: Supplementary materials

description: This repository contains data used for the testing of HTSinfer, a Python-based tool to infer metadata directly from bulk RNA-sequencing data, generated on Illumina platforms. 

The repository includes the sample tables containing metadata from the 72 self-generated and publicly shared RNA-Seq samples, the 720 samples collected from the SRA database, and the aggregated tables, describing the results of the inference. 

For testing purposes, HTSinfer was installed from Bioconda and executed with default settings, except for the --records parameter, which was adjusted in the case of the 720 RNA-Seq samples set. HTSinfer was tested with the --records argument set to different values (10 thousand, 100 thousand, 1 million, 10 million, and 0 – indicating all records) to evaluate performance and runtimes.

A supplementary table comparing the functionality of HTSinfer with other available metadata inference tools is also available in the repository.
DOI: 10.5281/zenodo.14177730
title: HTSinfer: Supplementary materials

description: This repository contains data used for the testing of HTSinfer, a Python-based tool to infer metadata directly from bulk RNA-sequencing data, generated on Illumina platforms.

The repository includes the sample tables containing metadata from the 72 self-generated and publicly shared RNA-Seq samples, the 720 samples collected from the SRA database, and the aggregated tables, describing the results of the inference. 

For testing purposes, HTSinfer was installed from Bioconda and executed with default settings, except for the --records parameter, which was adjusted in the case of the 720 RNA-Seq samples set. HTSinfer was tested with the --records argument set to different values (10 thousand, 100 thousand, 1 million, 10 million, and 0 – indicating all records) to evaluate performance and runtimes.
DOI: 10.5281/zenodo.14808598
title: HTSinfer: Supplementary materials

description: This repository contains data used for the testing of HTSinfer, a Python-based tool to infer metadata directly from bulk RNA-sequencing data, generated on Illumina platforms. 

The repository includes the sample tables containing metadata from the 72 self-generated and publicly shared RNA-Seq samples, the 720 samples collected from the SRA database, and the aggregated tables, describing the results of the inference. 

For testing purposes, HTSinfer was installed from Bioconda and executed with default settings, except for the --records parameter, which was adjusted in the case of the 720 RNA-Seq samples set. HTSinfer was tested with the --records argument set to different values (10 thousand, 100 thousand, 1 million, 10 million, and 0 – indicating all records) to evaluate performance and runtimes.

A supplementary table comparing the functionality of HTSinfer with other available metadata inference tools is also available in the repository.