cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6061739
title: Supplementary Data Foraging from Maternal effects impact decision-making in a viviparous lizard

description: Contains additional information relating to the methodology associated with this MS;All data collected to generate the results for the foraging task
DOI: 10.6084/m9.figshare.6061739.v1
title: Supplementary Data Foraging from Maternal effects impact decision-making in a viviparous lizard

description: Contains additional information relating to the methodology associated with this MS;All data collected to generate the results for the foraging task
DOI: 10.6084/m9.figshare.6061733
title: Supplementary Data Antipredatory from Maternal effects impact decision-making in a viviparous lizard

description: All data collected to generate the results for the antipredatory task
DOI: 10.6084/m9.figshare.6061733.v1
title: Supplementary Data Antipredatory from Maternal effects impact decision-making in a viviparous lizard

description: All data collected to generate the results for the antipredatory task
DOI: 10.6084/m9.figshare.6061724
title: Dataset from Shyer and larger bird species show more reduced fear of humans when living in urban environments

description: Dataset used for analyses
DOI: 10.6084/m9.figshare.6061724.v1
title: Dataset from Shyer and larger bird species show more reduced fear of humans when living in urban environments

description: Dataset used for analyses
DOI: 10.6084/m9.figshare.6061721
title: R code from Shyer and larger bird species show more reduced fear of humans when living in urban environments

description: R code used for the analyses
DOI: 10.6084/m9.figshare.6061721.v1
title: R code from Shyer and larger bird species show more reduced fear of humans when living in urban environments

description: R code used for the analyses
DOI: 10.6084/m9.figshare.6061718
title: Phylogeny from Shyer and larger bird species show more reduced fear of humans when living in urban environments

description: Phylogenetic reconstruction used in PGLS analyses
DOI: 10.6084/m9.figshare.6061718.v1
title: Phylogeny from Shyer and larger bird species show more reduced fear of humans when living in urban environments

description: Phylogenetic reconstruction used in PGLS analyses
DOI: 10.6084/m9.figshare.6061691
title: Supplementary Material for: Multidisciplinary Taiwan Consensus Recommendations for the Use of DEBDOX-TACE in Hepatocellular Carcinoma Treatment

description: Transarterial chemoembolization (TACE) is the first-line treatment in patients with unresectable hepatocellular carcinoma (HCC). In recent years, there has been increasing clinical evidence that drug-eluting beads provide a combined ischemic and cytotoxic effect that may be superior to conventional TACE, with low systemic toxicity. The therapeutic value of TACE performed using the embolic microsphere DC Bead loaded with doxorubicin (drug-eluting bead doxorubicin [DEBDOX]) has been shown by several randomized controlled trials. Since Lencioni et al. [Cardiovasc Intervent Radiol 2012; 35: 980–985] published the first widely accepted technical recommendations on HCC embolization with DEBDOX-TACE in 2012, new studies have contributed to a better understanding of when and how to apply this new therapeutic modality, and they have yet to be incorporated into an updated guideline. Additionally, differences in the underlying liver pathology and practice of transcatheter embolization between Asian and Western populations have not been adequately addressed, and there remain significant variations in the TACE protocols adopted in different parts of the world. These mainly revolve around the number and type of chemotherapeutic agents used, type of embolic material, reliance on Lipiodol, and selectivity of catheter positioning. As a result of these issues, it has been difficult to interpret and compare results obtained from different centers in a systematic fashion. To address these concerns, we convened a panel of experts specializing in different aspects of HCC treatment to craft an updated set of recommendations that better reflect recent clinical experiences and are tailored to the use of DEBDOX-TACE in Taiwan. The conclusions of this expert panel are described in the following article.
DOI: 10.6084/m9.figshare.6061688
title: Figures

description: The data consists the figures required in the paper Matrix multiplication using Neuromorphic computing
DOI: 10.6084/m9.figshare.6061688.v1
title: Figures

description: The data consists the figures required in the paper Matrix multiplication using Neuromorphic computing
DOI: 10.17870/bathspa.6061673
title: TAPS feedback forms 2016

description: Teacher Assessment in Primary Science (TAPS) project feedback forms (N=200) from dissemination and CPD events in 2016.
DOI: 10.17870/bathspa.6061673.v1
title: TAPS feedback forms 2016

description: Teacher Assessment in Primary Science (TAPS) project feedback forms (N=200) from dissemination and CPD events in 2016.
DOI: 10.6084/m9.figshare.6061670
title: ‘You can’t have one without the other’: the differential impact of civil society strength on the implementation of EU policy

description: The importance of civil society in policy-making is twofold; civil society organizations (CSOs) monitor government performance and mediate between citizens and the state to ensure proper implementation. In this study, we analyse the effects of two aspects of civil society (civic participation and CSO consultation) on member states’ implementation of European Union (EU) policy. The analysis is based on a novel dataset of practical implementation in 24 member states. Our findings reveal that the combination of high levels of civic participation and routine CSO consultations improves policy implementation. Furthermore, the effect is conditional on states’ bureaucratic capacity to accommodate societal interests regarding the EU directives. The results indicate a paradox; civil society is not effective in countries with low bureaucratic capacity, where civil society is needed most to improve government performance.
DOI: 10.6084/m9.figshare.6061670.v1
title: ‘You can’t have one without the other’: the differential impact of civil society strength on the implementation of EU policy

description: The importance of civil society in policy-making is twofold; civil society organizations (CSOs) monitor government performance and mediate between citizens and the state to ensure proper implementation. In this study, we analyse the effects of two aspects of civil society (civic participation and CSO consultation) on member states’ implementation of European Union (EU) policy. The analysis is based on a novel dataset of practical implementation in 24 member states. Our findings reveal that the combination of high levels of civic participation and routine CSO consultations improves policy implementation. Furthermore, the effect is conditional on states’ bureaucratic capacity to accommodate societal interests regarding the EU directives. The results indicate a paradox; civil society is not effective in countries with low bureaucratic capacity, where civil society is needed most to improve government performance.
DOI: 10.6084/m9.figshare.6061484
title: Staining protocols PONE-D-17-40594R1.docx

description: Images, protocols and excel templates used for PONE-D17-40594R1 article.<br>
DOI: 10.6084/m9.figshare.6061484.v1
title: Staining protocols PONE-D-17-40594R1.docx

description: Images, protocols and excel templates used for PONE-D17-40594R1 article.<br>
DOI: 10.6084/m9.figshare.6061451
title: Pulmonary Embolism Following Incomplete Surgical Resection of a Right Ventricular Myxoma: A Case Report and Review of the Literature

description: <b>Article full text</b> <br> The full text of this article can be found here<b>. </b>https://link.springer.com/article/10.1007/s40119-018-0109-y <br> <b>Provide enhanced content for this article</b> <br> If you are an author of this publication and would like to provide additional enhanced content for your article then please contact <b>adisrapidplus@springer.com</b>. <br> The journal offers a range of additional features designed to increase visibility and readership. All features will be thoroughly peer reviewed to ensure the content is of the highest scientific standard and all features are marked as ‘peer reviewed’ to ensure readers are aware that the content has been reviewed to the same level as the articles they are being presented alongside. Moreover, all sponsorship and disclosure information is included to provide complete transparency and adherence to good publication practices. This ensures that however the content is reached the reader has a full understanding of its origin. No fees are charged for hosting additional open access content. <br> Other enhanced features include, but are not limited to: <br> • Slide decks • Videos and animations • Audio abstracts • Audio slides<br>
DOI: 10.6084/m9.figshare.6061451.v1
title: Pulmonary Embolism Following Incomplete Surgical Resection of a Right Ventricular Myxoma: A Case Report and Review of the Literature

description: <b>Article full text</b> <br> The full text of this article can be found here<b>. </b>https://link.springer.com/article/10.1007/s40119-018-0109-y <br> <b>Provide enhanced content for this article</b> <br> If you are an author of this publication and would like to provide additional enhanced content for your article then please contact <b>adisrapidplus@springer.com</b>. <br> The journal offers a range of additional features designed to increase visibility and readership. All features will be thoroughly peer reviewed to ensure the content is of the highest scientific standard and all features are marked as ‘peer reviewed’ to ensure readers are aware that the content has been reviewed to the same level as the articles they are being presented alongside. Moreover, all sponsorship and disclosure information is included to provide complete transparency and adherence to good publication practices. This ensures that however the content is reached the reader has a full understanding of its origin. No fees are charged for hosting additional open access content. <br> Other enhanced features include, but are not limited to: <br> • Slide decks • Videos and animations • Audio abstracts • Audio slides<br>
DOI: 10.6084/m9.figshare.6061424
title: Processing Steps in Constructing Scaled Model of BP2_40. A sauropod-dominated tracksite from Rubha nam Brathairean (Brothers' Point), Isle of Skye, Scotland

description: Processing Steps in Constructing Scaled Model of BP2_40
DOI: 10.6084/m9.figshare.6061424.v1
title: Processing Steps in Constructing Scaled Model of BP2_40. A sauropod-dominated tracksite from Rubha nam Brathairean (Brothers' Point), Isle of Skye, Scotland

description: Processing Steps in Constructing Scaled Model of BP2_40
DOI: 10.6084/m9.figshare.6061421
title: Supplementary Material for: Membrane-Associated Kaposi Sarcoma-Associated Herpesvirus Glycoprotein B Promotes Cell Adhesion and Inhibits Migration of Cells via Upregulating IL-1β and TNF-α

description: <b><i>Objectives:</i></b> Kaposi sarcoma-associated herpesvirus (KSHV) glycoprotein B (gB) is expressed on the viral envelope as well as on the cytoplasmic membrane of infected cells. In the current study, we aimed to decipher the impact of membrane-associated gB on adhesion and migration of cells via modulating the expression of cytokines. <b><i>Methods:</i></b> A combination of polymerase chain reaction array, cell adhesion assay, and wound-healing migration assay was conducted to study the influence of the gB-induced cytokines on cell adhesion and migration. <b><i>Results:</i></b> Membrane-associated gB was demonstrated to significantly upregulate the expression of IL-1β and TNF-α. Elevated levels of these cytokines were observed in conditioned medium (CM) collected from gB-expressing cells (gB-CM) compared to CM collected from untransfected cells or cells transfected with empty vector. KSHV gB-induced IL-1β and TNF-α play a role in the ability of gB-CM to mediate cell adhesion while inhibiting migration. <b><i>Conclusion:</i></b> Our results provide novel evidence that demonstrates full-length gB expressed on cell membrane to mediate adhesion and inhibit migration of cells not only by autocrine mechanism mediated by RGD-based interactions [Hussein et al.: BMC Cancer 2016; 16: 148], but also by paracrine mechanism mediated by gB-induced IL-1β and TNF-α.
DOI: 10.6084/m9.figshare.6061421.v1
title: Supplementary Material for: Membrane-Associated Kaposi Sarcoma-Associated Herpesvirus Glycoprotein B Promotes Cell Adhesion and Inhibits Migration of Cells via Upregulating IL-1β and TNF-α

description: <b><i>Objectives:</i></b> Kaposi sarcoma-associated herpesvirus (KSHV) glycoprotein B (gB) is expressed on the viral envelope as well as on the cytoplasmic membrane of infected cells. In the current study, we aimed to decipher the impact of membrane-associated gB on adhesion and migration of cells via modulating the expression of cytokines. <b><i>Methods:</i></b> A combination of polymerase chain reaction array, cell adhesion assay, and wound-healing migration assay was conducted to study the influence of the gB-induced cytokines on cell adhesion and migration. <b><i>Results:</i></b> Membrane-associated gB was demonstrated to significantly upregulate the expression of IL-1β and TNF-α. Elevated levels of these cytokines were observed in conditioned medium (CM) collected from gB-expressing cells (gB-CM) compared to CM collected from untransfected cells or cells transfected with empty vector. KSHV gB-induced IL-1β and TNF-α play a role in the ability of gB-CM to mediate cell adhesion while inhibiting migration. <b><i>Conclusion:</i></b> Our results provide novel evidence that demonstrates full-length gB expressed on cell membrane to mediate adhesion and inhibit migration of cells not only by autocrine mechanism mediated by RGD-based interactions [Hussein et al.: BMC Cancer 2016; 16: 148], but also by paracrine mechanism mediated by gB-induced IL-1β and TNF-α.
DOI: 10.6084/m9.figshare.6061385
title: Supplementary Material for: A Simple and Novel Method to Attain Retrograde Ureteral Access after Previous Cohen Cross-Trigonal Ureteral Reimplantation

description: <b><i>Objective: </i></b>To describe a simple, novel method to achieve ureteric access in the Cohen crossed reimplanted ureter, which will allow retrograde working access via the conventional transurethral method. <b><i>Materials and Methods: </i></b>Under cystoscopic vision, suprapubic needle puncture was performed. The needle was directed (bevel facing) towards the desired ureteric orifice (UO). A guidewire (with a floppy-tip) was then inserted into the suprapubic needle passing into the bladder, and then easily passed into the crossed-reimplanted UO. The distal end of the guidewire was then removed through the urethra with cystoscopic grasping forceps. The straightened ureter then easily facilitated ureteroscopy access, retrograde pyelogram studies, and JJ stent insertion in a conventional transurethral method. <b><i>Results: </i></b>The UO and ureter were aligned in a more conventional orthotopic course, to allow for conventional transurethral working access. <b><i>Conclusion: </i></b>A novel method to access the Cohen crossed reimplanted ureter was described. All previously published methods of accessing the crossed ureter were critically appraised.
DOI: 10.6084/m9.figshare.6061385.v1
title: Supplementary Material for: A Simple and Novel Method to Attain Retrograde Ureteral Access after Previous Cohen Cross-Trigonal Ureteral Reimplantation

description: <b><i>Objective: </i></b>To describe a simple, novel method to achieve ureteric access in the Cohen crossed reimplanted ureter, which will allow retrograde working access via the conventional transurethral method. <b><i>Materials and Methods: </i></b>Under cystoscopic vision, suprapubic needle puncture was performed. The needle was directed (bevel facing) towards the desired ureteric orifice (UO). A guidewire (with a floppy-tip) was then inserted into the suprapubic needle passing into the bladder, and then easily passed into the crossed-reimplanted UO. The distal end of the guidewire was then removed through the urethra with cystoscopic grasping forceps. The straightened ureter then easily facilitated ureteroscopy access, retrograde pyelogram studies, and JJ stent insertion in a conventional transurethral method. <b><i>Results: </i></b>The UO and ureter were aligned in a more conventional orthotopic course, to allow for conventional transurethral working access. <b><i>Conclusion: </i></b>A novel method to access the Cohen crossed reimplanted ureter was described. All previously published methods of accessing the crossed ureter were critically appraised.
DOI: 10.6084/m9.figshare.6061361
title: figure9

description: figure9
DOI: 10.6084/m9.figshare.6061361.v1
title: figure9

description: figure9
DOI: 10.6084/m9.figshare.6061352
title: figure5

description: figure5
DOI: 10.6084/m9.figshare.6061352.v1
title: figure5

description: figure5
DOI: 10.6084/m9.figshare.6061349
title: figure4

description: figure4
DOI: 10.6084/m9.figshare.6061349.v1
title: figure4

description: figure4
DOI: 10.6084/m9.figshare.6061346
title: figure2&3

description: figure2&3
DOI: 10.6084/m9.figshare.6061346.v2
title: figure2&3

description: figure2&3
DOI: 10.6084/m9.figshare.6061346.v1
title: figure2&3

description: figure2&3
DOI: 10.6084/m9.figshare.6061331
title: figure1

description: figure1
DOI: 10.6084/m9.figshare.6061331.v2
title: figure1

description: figure1
DOI: 10.6084/m9.figshare.6061331.v1
title: figure1

description: figure1
DOI: 10.6084/m9.figshare.6061304
title: Refractive indices of layers and optical simulations of Cu(In,Ga)Se<sub>2</sub> solar cells

description: Cu(In,Ga)Se<sub>2</sub> -based solar cells have reached efficiencies close to 23%. Further knowledge-driven improvements require accurate determination of the material properties. Here, we present refractive indices for all layers in Cu(In,Ga)Se<sub>2</sub> solar cells with high efficiency. The optical bandgap of Cu(In,Ga)Se<sub>2</sub> does not depend on the Cu content in the explored composition range, while the absorption coefficient value is primarily determined by the Cu content. An expression for the absorption spectrum is proposed, with Ga and Cu compositions as parameters. This set of parameters allows accurate device simulations to understand remaining absorption and carrier collection losses and develop strategies to improve performances.
DOI: 10.6084/m9.figshare.6061304.v1
title: Refractive indices of layers and optical simulations of Cu(In,Ga)Se<sub>2</sub> solar cells

description: Cu(In,Ga)Se<sub>2</sub> -based solar cells have reached efficiencies close to 23%. Further knowledge-driven improvements require accurate determination of the material properties. Here, we present refractive indices for all layers in Cu(In,Ga)Se<sub>2</sub> solar cells with high efficiency. The optical bandgap of Cu(In,Ga)Se<sub>2</sub> does not depend on the Cu content in the explored composition range, while the absorption coefficient value is primarily determined by the Cu content. An expression for the absorption spectrum is proposed, with Ga and Cu compositions as parameters. This set of parameters allows accurate device simulations to understand remaining absorption and carrier collection losses and develop strategies to improve performances.
DOI: 10.6084/m9.figshare.6061298
title: Data from WMLES of a flat-plate TBL using unstructured grids

description: This dataset accompanies the following publication.<br><b>Mukha, T., Johannson, M., Liefvendahl, M. Effect of wall-stress model and mesh-cell topology on the predictive accuracy of LES of turbulent boundary layer flows. In ECCM-ECFD 2018, Glasgow, UK.</b><br>The dataset consists of simulation data and the two computational meshes the simulations employ.<br>The data is located in the data.zip file. It contains the "VTK" folder that holds full 2D fields of the unknowns, averaged in the spanwise direction. The format is multi-block VTK data, that can be natively read with such software as Paraview and turbulucid.Additionally, several computed quantities are provided as text files. This includes, the skin friction coefficient, the wall shear stress and others. The naming convenction is that Paved and Poly corresponds to data from simulations on the paved and polyhedral grids, respectively. And 1st and 3rd refers to the location of the sampling point of the WMLES mesh.<br><br>The meshes.tar file contains the two meshes -- paved and polyhedral -- which are stored in OpenFOAM format.<br><br>For more information about the simulations, refer to the article. Please cite it, if you use the data.<pre><br></pre>
DOI: 10.6084/m9.figshare.6061298.v1
title: Data from WMLES of a flat-plate TBL using unstructured grids

description: This dataset accompanies the following publication.<br><b>Mukha, T., Johannson, M., Liefvendahl, M. Effect of wall-stress model and mesh-cell topology on the predictive accuracy of LES of turbulent boundary layer flows. In ECCM-ECFD 2018, Glasgow, UK.</b><br>The dataset consists of simulation data. In particular, the VTK folder contains full 2D fields of the unknowns, averaged in the spanwise direction. The format is multi-block VTK data, that can be natively read with such software as Paraview and turbulucid.<br>Additionally, several computed quantities are provided as text files. This includes, the skin friction coefficient, the wall shear stress and others. The naming convenction is that Paved and Poly corresponds to data from simulations on the paved and polyhedral grids, respectively. And 1st and 3rd refers to the location of the sampling point of the WMLES mesh.<br>For more information about the simulations, refer to the article. Please cite it, if you use the data.<pre><br></pre>
DOI: 10.6084/m9.figshare.6061262
title: DOIs.xlsx

description: List of PloS One DOIs with their altmetrics counts across different altmetric data aggregators used in the following paper:<br>Zahedi, Z., Costas, R. (2018). General discussion of data quality challenges in social media metrics: extensive comparison of four major altmetric data aggregators. PloSOne.<br>
DOI: 10.6084/m9.figshare.6061121
title: Additional file 1: of Cancer Genome Interpreter annotates the biological and clinical relevance of tumor alterations

description: Table S1. The features provided by different resources/methods and details about which of them are employed by the CGI. (XLS 21 kb)
DOI: 10.6084/m9.figshare.6061121.v1
title: Additional file 1: of Cancer Genome Interpreter annotates the biological and clinical relevance of tumor alterations

description: Table S1. The features provided by different resources/methods and details about which of them are employed by the CGI. (XLS 21 kb)
DOI: 10.6084/m9.figshare.6061115
title: Additional file 2: of Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction

description: Consensus sequences of the 5’ UTRs. (FASTA 29 kb)
DOI: 10.6084/m9.figshare.6061115.v1
title: Additional file 2: of Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction

description: Consensus sequences of the 5’ UTRs. (FASTA 29 kb)
DOI: 10.6084/m9.figshare.6061103
title: Additional file 1: of Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction

description: Full-length consensus sequences. (FAS 193Â kb)
DOI: 10.6084/m9.figshare.6061103.v1
title: Additional file 1: of Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction

description: Full-length consensus sequences. (FAS 193Â kb)