cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14120906.v1
title: Ribosomal protein library of different microbial species

description: Ribosomal proteins are often investigated for their structural and functional roles in ribosome function. This is of particular importance given that an ensemble of tens of ribosomal proteins cooperatively help constitute the complex molecular dance during protein translation. But, what is less often known is the phylogenetic significance of ribosomal proteins. For example, in an approach named mass spectrometry enabled microbial identification, ribosomal proteins could serve as biomarkers for peaks in mass spectrum of microbial whole cells since they are generally of high abundance in a cell. Known as a proteome database search approach where biomarker mass peaks are actively sought to help identify a microorganism, building of a comprehensive library of ribosomal proteins from different microbial species is a must. This work sought to provide the first steps towards this goal by collating a catalogue of ribosomal proteins from different microbial species from bacteria, archaea and eukaryotes. Each set of ribosomal proteins from a specific microbial species are labelled with the name of the species that help in downstream identification process. Besides protein name and amino acid sequence, each entry in the library also comprises molecular weight, number of residues, and nucleotide sequence of the ribosomal proteins, where molecular weight is critical for annotating biomarker mass peaks. Identification of biomarker mass peaks thus identify a microbial species. Overall, use of proteome database search approach for mass spectrometry-based microbial identification is hampered by lack of suitable open-source ribosomal protein database. Effort outlined in this abstract hope to kickstart the effort to collate a comprehensive ribosomal protein library of different microbial species in bacteria, archaea, and eukaryotes to help improve adoption of the fast and straightforward approach of using mass spectrometry for routine identification of common microorganisms in research and clinical settings.
DOI: 10.6084/m9.figshare.14120906
title: Ribosomal protein library of different microbial species

description: Ribosomal proteins are often investigated for their structural and functional roles in ribosome function. This is of particular importance given that an ensemble of tens of ribosomal proteins cooperatively help constitute the complex molecular dance during protein translation. But, what is less often known is the phylogenetic significance of ribosomal proteins. For example, in an approach named mass spectrometry enabled microbial identification, ribosomal proteins could serve as biomarkers for peaks in mass spectrum of microbial whole cells since they are generally of high abundance in a cell. Known as a proteome database search approach where biomarker mass peaks are actively sought to help identify a microorganism, building of a comprehensive library of ribosomal proteins from different microbial species is a must. This work sought to provide the first steps towards this goal by collating a catalogue of ribosomal proteins from different microbial species from bacteria, archaea and eukaryotes. Each set of ribosomal proteins from a specific microbial species are labelled with the name of the species that help in downstream identification process. Besides protein name and amino acid sequence, each entry in the library also comprises molecular weight, number of residues, and nucleotide sequence of the ribosomal proteins, where molecular weight is critical for annotating biomarker mass peaks. Identification of biomarker mass peaks thus identify a microbial species. Overall, use of proteome database search approach for mass spectrometry-based microbial identification is hampered by lack of suitable open-source ribosomal protein database. Effort outlined in this abstract hope to kickstart the effort to collate a comprehensive ribosomal protein library of different microbial species in bacteria, archaea, and eukaryotes to help improve adoption of the fast and straightforward approach of using mass spectrometry for routine identification of common microorganisms in research and clinical settings.
DOI: 10.25919/napz-9m39
title: Parkes observations for project P1078 semester 2020OCTS_02

description: Black-Widow (BW) millisecond pulsars (MSPs) form a special subclass of MSPs having a low mass companion (~0.01-0.05 solar mass) in compact binary orbit with orbital period &lt; 10 hours. Material blown from the companion by relativistic pulsar wind causes frequency dependent eclipses of the pulsar radio emission. Among these known eclipsing BW MSPs we have chosen three relatively bright objects which show eclipses at relatively higher radio frequencies. We request 30 hours observing time to observe these pulsars with Parkes UWL receiver in 700-4032 MHz to achieve the following science goals, i) With wideband observations of these pulsars we will apply a technique of modelling the eclipse phase spectra (already demonstrated by us) in optically thick to thin transition state (optical depth ~1), which will in turn allow to directly probe to the eclipse material. ii) Simultaneous polarisation observations will allow us to predict the magnetic field strength in the eclipse boundaries through measurements of the rotation measure . Derived magnetic field strengths at the eclipse boundaries will be compared with the values from modelling the eclipse phase spectra. This will allow us to solve the existing puzzle of few orders of magnitude lower magnetic field strength at eclipse boundaries to withstand the pulsar wind ram pressure. iii) Modelling the spectra at different orbital phases over the eclipse will allow us to probe the eclipse material properties and eclipse mechanism at different orbital phases, which is a new way to probe the pulsar and stellar wind interaction.
DOI: 10.6084/m9.figshare.14120918
title: Data availability

description: this data include two dataset: first data set and second dataset with the coding.
DOI: 10.6084/m9.figshare.14120918.v1
title: Data availability

description: this data include two dataset: first data set and second dataset with the coding.
DOI: 10.25919/b1cc-wx52
title: Parkes observations for project P456 semester 2020OCTS_09

description: The Parkes Pulsar Timing Array (PPTA) project has three primary goals: (a) detection of gravitational waves from astronomical sources, (b) establishment of a pulsar timescale, and (c) improvement of our understanding of Solar-system dynamics. The PPTA is the oldest of three international pulsar timing groups. We have the smallest telescope and the smallest group, but the best measurements and the best results. Our bound on the strength of the incoherent gravitational wave background is the only bound which significantly constrains theoretical models. We have maintained our leading position because: we have the southern sky; we have a small but well-focussed group; we have the best-calibrated receivers; and we have been able to observe with an almost regular cadence of 15 to 20 days over a wide bandwidth. With this proposal we aim to maintain our pre-eminent position in the field. Unlike most observing proposals, this is a continuing proposal for which the observations will continue to improve bounds on ultra-low-frequency gravitational waves until they are finally detected. Continued Parkes observations will remain valuable at least until the first stage of the SKA is able to improve on our sensitivity and observing cadence. Even after the gravitational wave background is detected we will want to continue observations in support of the nascent field of gravitational wave astronomy!
DOI: 10.25345/c5322w
title: MassIVE MSV000086957 - Residue Analysis Project Standards
title: Authentic standards used to validate annotations of ceramic sherds.
DOI: 10.6084/m9.figshare.14120981.v1
title: Sharing data

description: this is the data that were used in my research work.
DOI: 10.6084/m9.figshare.14120981
title: Sharing data

description: this is the data that were used in my research work.
DOI: 10.6084/m9.figshare.14120945
title: IELTS SCHEDULE.pdf

description: Description
DOI: 10.6084/m9.figshare.14120945.v2
title: IELTS SCHEDULE.pdf

description: Description
DOI: 10.6084/m9.figshare.14120945.v1
title: IELTS SCHEDULE.pdf

description: Description
DOI: 10.13140/rg.2.2.17200.89603
title: Pressure-volume loop data analysis (load independent parameters) Linear PRSW and dpdt vs. EDV Large animal case study
DOI: 10.6084/m9.figshare.14113799.v1
title: Wiki-Reliability: A Large Scale Dataset for Content Reliability on Wikipedia

description: Wiki-Reliability: Machine Learning datasets for measuring content reliability on Wikipedia<br>Consists of metadata features and content text datasets, with the format <i>{template_name}_features.csv</i> and <i>{template_name}_txt.csv.gz </i>respectively.<br>For more details on the project and links to data reading and benchmarking:https://meta.wikimedia.org/wiki/Research:Wiki-Reliability:_A_Large_Scale_Dataset_for_Content_Reliability_on_Wikipedia<br>
DOI: 10.15784/601432
title: MOA-derived Structural Feature Map of the Ross Ice Shelf

description: The surface of the Ross Ice Shelf (RIS) is textured by flow stripes, crevasses and other fea- tures related to ice flow and deformation. Here, moderate resolution optical satellite images are used to map and classify regions of the RIS characterized by different surface textures. Because the textures arise from ice deformation, the map is used to identify structural provinces with common deformation history. We classify four province types: regions associated with large outlet glaciers, shear zones, exten- sion downstream of obstacles and suture zones between provinces with different upstream sources. Adjacent provinces with contrasting histories are in some locations deforming at different rates, suggest- ing that our province map is also an ice fabric map. Structural provinces have more complicated shapes in the part of the ice shelf fed by West Antarctic ice streams than in the part fed by outlet glaciers from the Transantarctic Mountains. The map may be used to infer past variations in stress conditions and flow events that cannot be inferred from flow traces alone.
DOI: 10.5281/zenodo.4563293
title: Crop Diversification Datasets (Italy)

description: Crop diversification in Italy dataset. The method developed by Jahanshiri et al., (2020) was used to study the climate suitability of underutilised crops. A list of ecological parameters considered in the climate suitability assessment.<br> Ecological parameters for 600 crops were obtained from the database and used to classify for Italy. The result is a matrix of 477,034 by 600 which was then simplified to the present dataset to contain one crop per location.
description: {"references": ["A land evaluation framework for agricultural diversification"]}
DOI: 10.5281/zenodo.4563292
title: Crop Diversification Datasets (Italy)

description: Crop diversification in Italy dataset. The method developed by Jahanshiri et al., (2020) was used to study the climate suitability of underutilised crops. A list of ecological parameters considered in the climate suitability assessment.<br> Ecological parameters for 600 crops were obtained from the database and used to classify for Italy. The result is a matrix of 477,034 by 600 which was then simplified to the present dataset to contain one crop per location.
description: {"references": ["A land evaluation framework for agricultural diversification"]}
DOI: 10.6084/m9.figshare.14120924.v1
title: Liu_GRL_paper_YR_another_distal_mud

description: seismic dataset used in the manuscript.<br>
DOI: 10.6084/m9.figshare.13627349
title: Occurrence records of the Neotropical Ant-gardens (AGs) and the AG ant/epiphyte species

description: Records of occurrence of both the Neotropical Ant-gardens (AGs) and the species of ants and epiphytes associated with this mutualism. The AG records were obtained from literature and fieldwork. The ants and epiphytes records were obtained from GBIF, ANTMAPS, REMIB, specialized myrmecological and floristic lists, and field collections.<br>
DOI: 10.6084/m9.figshare.13627349.v2
title: Occurrence records of the Neotropical Ant-gardens (AGs) and the AG ant/epiphyte species

description: Records of occurrence of both the Neotropical Ant-gardens (AGs) and the species of ants and epiphytes associated with this mutualism. The AG records were obtained from literature and fieldwork. The ants and epiphytes records were obtained from GBIF, ANTMAPS, REMIB, specialized myrmecological and floristic lists, and field collections.<br>
DOI: 10.17632/sb9cn97sxb.1
title: Data for: A league-winner algorithm for defect classication in an industrial web inspection system

description: Data sheets with the set of defects used for training and testing the classiffiers. Columns B to BC (if read with Excel) are the value of 54 descriptors. Following two columns are the defect labelling given by an expert during the supervised training (both as a char or as an index). char E -&gt; 6 fish-eye char I -&gt; 0 gel char O -&gt; 1 hole char N -&gt; 2 Black Speck char B -&gt; 3 Bug/Insect char A -&gt; 4 Wrinkle char G -&gt; 5 Rubber char D -&gt; 7 Oil Drop char L -&gt; 8 Light dirt char F -&gt; 9 Fail Transmission First column is the name of the defect. Its first letter should be coherent with last two columns for defects with the following exceptions: - defects named as JXXXX.bmp are defects that can be considered as gel or rubber - defects named as KXXXX.bmp are defects that can be considered as gel or black speck - defects named as MXXXX.bmp are defects that can be considered as rubber or black speck
DOI: 10.17632/rz279kw5y4.1
title: Data for: Cointegration of electricity consumption and GDP in the presence of smooth structural changes

description: Data on electricity consumption, electricity prices, and real GDP.
DOI: 10.17632/y8sz5np9tz.1
title: Data for: The roles of political risk and crude oil in stock market based on quantile cointegration approach: A comparative study in China and US

description: The codes are used to estimate the quantile ARDL model and output the results.
DOI: 10.5281/zenodo.4507941
title: DeepMerge II: Building Robust Deep Learning Algorithms for Merging Galaxy Identification Across Domains (Data)

description: We present the data used in "DeepMerge II: Building Robust Deep Learning Algorithms for Merging Galaxy Identification Across Domains". In this paper, we test domain adaptation techniques, such as Maximum Mean Discrepancy (MMD) and adversarial training with Domain Adversarial Neural Networks (DANNs) for cross-domain studies of merging galaxies. Domain adaptation is performed between two simulated datasets of various levels of observational realism (simulation-to-simulation experiments), and between simulated data and observed telescope images (simulation-to-real experiments). For more details about the datasets please see the paper mentioned above. <strong>Simulation-to-Simulation Experiments</strong> Data used to study distant merging galaxies using simulated images from the Illustris-1 cosmological simulation at redshift z=2. The images are 75x75 pixels with three filters applied that mimic Hubble Space Telescope (HST) observations (<em>ACS F814W,NC F356W, WFC3 F160W</em>) with added point-spread function (PSF) and with or without observational noise. Source Domain Images: SimSim_SOURCE_X_Illustris2_pristine.npy Labels: SimSim_SOURCE_y_Illustris2_pristine.npy Target Domain Images: SimSim_TARGET_X_Illustris2_noisy.npy Labels: SimSim_TARGET_y_Illustris2_noisy.npy <strong>Simulation-to-Real Experiments</strong> Data used to study nearby merging galaxies using simulated Illustris-1 images at redshift z=0 and observed Sloan Digital Sky Survey (SDSS) images from the Galaxy Zoo project. All images have three filters. SDSS images have (<em>g,r,i</em>) filters, while simulated Illustris images also mimic the same three SDSS filters with added effects of dust, PSF and observational noise. Source Domain Images: SimReal_SOURCE_X_Illustris0.npy Labels: SimReal_SOURCE_y_Illustris0.npy Target Domain Images: SimReal_TARGET_X_postmergers_SDSS.npy Labels: SimReal_TARGET_y_postmergers_SDSS.npy
DOI: 10.5281/zenodo.4507940
title: DeepMerge II: Building Robust Deep Learning Algorithms for Merging Galaxy Identification Across Domains (Data)

description: We present the data used in "DeepMerge II: Building Robust Deep Learning Algorithms for Merging Galaxy Identification Across Domains". In this paper, we test domain adaptation techniques, such as Maximum Mean Discrepancy (MMD) and adversarial training with Domain Adversarial Neural Networks (DANNs) for cross-domain studies of merging galaxies. Domain adaptation is performed between two simulated datasets of various levels of observational realism (simulation-to-simulation experiments), and between simulated data and observed telescope images (simulation-to-real experiments). For more details about the datasets please see the paper mentioned above. <strong>Simulation-to-Simulation Experiments</strong> Data used to study distant merging galaxies using simulated images from the Illustris-1 cosmological simulation at redshift z=2. The images are 75x75 pixels with three filters applied that mimic Hubble Space Telescope (HST) observations (<em>ACS F814W,NC F356W, WFC3 F160W</em>) with added point-spread function (PSF) and with or without observational noise. Source Domain Images: SimSim_SOURCE_X_Illustris2_pristine.npy Labels: SimSim_SOURCE_y_Illustris2_pristine.npy Target Domain Images: SimSim_TARGET_X_Illustris2_noisy.npy Labels: SimSim_TARGET_y_Illustris2_noisy.npy <strong>Simulation-to-Real Experiments</strong> Data used to study nearby merging galaxies using simulated Illustris-1 images at redshift z=0 and observed Sloan Digital Sky Survey (SDSS) images from the Galaxy Zoo project. All images have three filters. SDSS images have (<em>g,r,i</em>) filters, while simulated Illustris images also mimic the same three SDSS filters with added effects of dust, PSF and observational noise. Source Domain Images: SimReal_SOURCE_X_Illustris0.npy Labels: SimReal_SOURCE_y_Illustris0.npy Target Domain Images: SimReal_TARGET_X_postmergers_SDSS.npy Labels: SimReal_TARGET_y_postmergers_SDSS.npy
DOI: 10.5517/ccdc.csd.cc245gyr
title: CCDC 1971474: Experimental Crystal Structure Determination

description: Related Article: Yuanchao Lv|2021|CSD Communication|||
DOI: 10.13140/rg.2.2.33768.39683
title: English TOT course 2015 : Official document
DOI: 10.5281/zenodo.4563366
title: The Role of Injection Fluid Elasticity in Microscopic Displacement Efficiency of Residual Non-wetting Phase: An In-situ Investigation

description: Data used to generate elastic desaturation curve
DOI: 10.5281/zenodo.4563365
title: The Role of Injection Fluid Elasticity in Microscopic Displacement Efficiency of Residual Non-wetting Phase: An In-situ Investigation

description: Data used to generate elastic desaturation curve
DOI: 10.6084/m9.figshare.14120924.v2
title: Liu_YR_another_distal_mud_paper

description: Boomer reflection dataset, grids used for seismic geomorphology and the grain size information of the surficial sediments.<br>
DOI: 10.5281/zenodo.4007067
title: HeteroFuzz: Fuzz Testing to Detect Platform Dependent Divergence for Heterogeneous Applications

description: HeteroFuzz supplementary material.
DOI: 10.5281/zenodo.4007066
title: HeteroFuzz: Fuzz Testing to Detect Platform Dependent Divergence for Heterogeneous Applications

description: HeteroFuzz supplementary material.
DOI: 10.4225/87/qfuibm
title: The Household, Income and Labour Dynamics in Australia (HILDA) Survey, RESTRICTED RELEASE 16 (Waves 1-16)

description: The Household, Income and Labour Dynamics in Australia (HILDA) Survey is a nationally representative longitudinal study of Australian households which commenced in 2001. Funded by the Australian Government Department of Social Services (DSS), the HILDA Survey is managed by the Melbourne Institute of Applied Economic and Social Research at the University of Melbourne. The HILDA Survey provides longitudinal data on the lives of Australian residents. Its primary objective is to support research questions falling within three broad and inter-related areas of income, labour market and family dynamics. The HILDA Survey is a household-based panel study of Australian households and, as such, it interviews all household members (15 years and over) of the selected households and then re-interviews the same people in subsequent years. This dataset is the 16th release of the HILDA data, incorporating data collected from 2001 through 2016 (Waves 1-16). Special topic modules in Wave 16 are: education, skills and abilities; literacy and numeracy; and cognitive ability tasks. Please note that this release of the HILDA Restricted Release is now superseded. For the current release, please visit https://ada.edu.au/hilda_rr_current
DOI: 10.5281/zenodo.4563671
title: absorption coefficients

description: Data set of absorption coefficients.
DOI: 10.5281/zenodo.4089714
title: absorption coefficients

description: Data set of absorption coefficients.
DOI: 10.21227/avxp-8h56
title: Human Neck Postures and Movements - Kinematics and Kinetics

description: Human Neck movements data acquired using Meatwear - CPRO device - Accelerometer-based Kinematic data. Data fed to OpenSim simulation software extracted Kinematics and Kinetics (Muscles, joints - Forces, Acceleration, Position)
DOI: 10.5281/zenodo.4563712
title: HeteroFuzz

description: HeteroFuzz supplementary material.
DOI: 10.5281/zenodo.4563707
title: How do Library Maintainers Refactor to Secure Software? A Study of Maven Releases

description: Third-party library dependencies have become prominent in to-day’s software development; however, the threat of security vul-nerabilities in dependencies is a growing concern. In addition toadding new features, fixing bugs, and evolving code, a librarymaintainer needs to consider the security of their libraries whenevolving their code. Maruyama[31]proposed secure refactoringto secure code; however, it is unknown the extent to which se-cure refactoring is practiced in the wild. To fill this gap, in thislarge empirical study, we want to understand the role in whichrefactoring plays in securing code from known vulnerabilities.Results of our preliminary study of 351 vulnerabilities that de-tected 7,853 refactorings confirmed the presence of secure refac-toring, causing us to expand the definition of secure refactoringinto secure-release refactoring. Conducting a mixed-method em-pirical study, we show that secure-release refactoring is usuallyreleased in the major and pre-release versions, while the most fre-quent secure-release refactoring beingAdd Method Annotation,Change Variable Type,Rename Variable Type,Rename MethodandChange Parameter Type. For our qualitative investigation of512 samples, we confirm that secure-release refactoring securityfixes are not involved in complex tasks but for singular tasks. In-terestingly, we reveal several relationships between the type ofmaintenance task and secure-release refactoring. Our findings are astep towards understanding how refactoring is used to secure code,opening up avenues for future work that contribute to promotingsecure dependencies