cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/d37bjgd4cf.1
title: JDS26263

description: JDS26263 Supplementary Tables
DOI: 10.15468/dl.8tzpnf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chiloglanis niger Roberts, 1989",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((51.6287 10.9151,51.6417 11.0599,46.1382 11.0599,46.1382 2.0599,46.3452 2.0599,48.3339 4.1422,49.3495 5.6782,49.6723 6.54,51.2679 9.1793,51.3777 9.8638,51.776 10.0634,51.9157 10.4446,51.6287 10.9151))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057323-250525065834625/datasets/export for details.
DOI: 10.17632/sjdj5nwjnw
title: Charlcombe Bay Pedorelict CT-Scans

description: These data are the two most informative Micro-CT-scans of pedorelicts interpreted as clasts of rhizogenic calcrete with ichnofossils from Charlcombe Bay, Portishead, North Somerset. Micro-focus Computed Tomography (μ-CT) scanning of TTP used a Nikon XTH225ST CT Scanner at the XTM Facility of the Palaeobiology Research Group, University of Bristol. See paper "A Triassic semi-arid upland community of herbaceous ferns and rhizophagous arthropods evidenced by ichnofossils in rhizogenic calcrete pedorelicts from SW England" for information. In the two 7-zip folders, MH_01_20um & MH_02, open the files with extensions '.xtekct' using Notepad++ or whatever for metadata which you will need for setting up a program to look at the CT-scans, especially the numbers of voxels and the voxel sizes in the X, Y and Z directions. The CT-scans are held in sub-folders as stacks of .tif files starting with _0000 . For just a quick peek, open and look at one of the tif files near the middle of the stack.
DOI: 10.17632/sjdj5nwjnw.1
title: Charlcombe Bay Pedorelict CT-Scans

description: These data are the two most informative Micro-CT-scans of pedorelicts interpreted as clasts of rhizogenic calcrete with ichnofossils from Charlcombe Bay, Portishead, North Somerset. Micro-focus Computed Tomography (μ-CT) scanning of TTP used a Nikon XTH225ST CT Scanner at the XTM Facility of the Palaeobiology Research Group, University of Bristol. See paper "A Triassic semi-arid upland community of herbaceous ferns and rhizophagous arthropods evidenced by ichnofossils in rhizogenic calcrete pedorelicts from SW England" for information. In the two 7-zip folders, MH_01_20um & MH_02, open the files with extensions '.xtekct' using Notepad++ or whatever for metadata which you will need for setting up a program to look at the CT-scans, especially the numbers of voxels and the voxel sizes in the X, Y and Z directions. The CT-scans are held in sub-folders as stacks of .tif files starting with _0000 . For just a quick peek, open and look at one of the tif files near the middle of the stack.
DOI: 10.17632/s7k7rh2vz7
title: Smart-SNPer: Automated crRNA Design for Ultrasensitive RPA-Cas12a SNP Detection

description: The source data corresponding to the images in Smart-SNPer: Automated crRNA Design for Ultrasensitive RPA-Cas12a SNP Detection, including qPCR instrument data, visualized fluorescence quantification data, and complete agarose gel images.
DOI: 10.17632/s7k7rh2vz7.1
title: Smart-SNPer: Automated crRNA Design for Ultrasensitive RPA-Cas12a SNP Detection

description: The source data corresponding to the images in Smart-SNPer: Automated crRNA Design for Ultrasensitive RPA-Cas12a SNP Detection, including qPCR instrument data, visualized fluorescence quantification data, and complete agarose gel images.
DOI: 10.17632/3v3hhkddmz
title: Hive scale dataset near Debrecen, Hungary between 2020-2025

description: Name: Debrecen_Hive_12.xlsx Beekeeping hive data for Hive 12.
File type = XLSX. This file contains the raw time series data of hive 12 weight measurements between 2020–2025, collected near Debrecen, Hungary, as part of the monitoring campaign. The dataset includes continuous 1-hour weight readings taken from the GSM hive scale placed under the colonies, capturing short-term fluctuations in hive mass due to foraging, environmental conditions, or management interventions.

Name: Debrecen_Hive_18.csv Beekeeping hive data for Hive 18.
File type = CSV. This file contains the raw time series data of hive 18 weight measurements between 2022–2025, collected near Debrecen, Hungary, as part of the monitoring campaign. The dataset includes continuous 10-minute weight readings taken from the GSM hive scale placed under the colonies, capturing short-term fluctuations in hive mass due to foraging, environmental conditions, or management interventions.

The scales were placed under 10 NB (Nagy Boconádi) framed (420 × 360 mm) and ½ NB framed (420 × 180 mm) Tamási type hives with screened and hygienic bottom boards, which housed honey bee colonies belonging to the Apis mellifera carnica, also known as the Carniolan honey bee (Western honey bee).

Main bee pastures: oilseed rape, black locust, summer mixed, sunflower.


This work has been implemented by the National Multidisciplinary Laboratory for Climate Change (RRF-2.3.1-21-2022-00014) project within the framework of Hungary's National Recovery and Resilience Plan supported by the Recovery and Resilience Facility of the European Union.
DOI: 10.17632/3v3hhkddmz.1
title: Hive scale dataset near Debrecen, Hungary between 2020-2025

description: Name: Debrecen_Hive_12.xlsx Beekeeping hive data for Hive 12.
File type = XLSX. This file contains the raw time series data of hive 12 weight measurements between 2020–2025, collected near Debrecen, Hungary, as part of the monitoring campaign. The dataset includes continuous 1-hour weight readings taken from the GSM hive scale placed under the colonies, capturing short-term fluctuations in hive mass due to foraging, environmental conditions, or management interventions.

Name: Debrecen_Hive_18.csv Beekeeping hive data for Hive 18.
File type = CSV. This file contains the raw time series data of hive 18 weight measurements between 2022–2025, collected near Debrecen, Hungary, as part of the monitoring campaign. The dataset includes continuous 10-minute weight readings taken from the GSM hive scale placed under the colonies, capturing short-term fluctuations in hive mass due to foraging, environmental conditions, or management interventions.

The scales were placed under 10 NB (Nagy Boconádi) framed (420 × 360 mm) and ½ NB framed (420 × 180 mm) Tamási type hives with screened and hygienic bottom boards, which housed honey bee colonies belonging to the Apis mellifera carnica, also known as the Carniolan honey bee (Western honey bee).

Main bee pastures: oilseed rape, black locust, summer mixed, sunflower.


This work has been implemented by the National Multidisciplinary Laboratory for Climate Change (RRF-2.3.1-21-2022-00014) project within the framework of Hungary's National Recovery and Resilience Plan supported by the Recovery and Resilience Facility of the European Union.
DOI: 10.15468/dl.h3wva9
title: Occurrence Download

description: A dataset containing 12838 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "OccurrenceStatus is Present",
 "TaxonKey is Terminalia leiocarpa (DC.) Baill."
 ]
}

 The dataset includes 12838 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057322-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/r9rgdrfjxy
title: PMO SO

description: PMO Service Offerings
DOI: 10.17632/r9rgdrfjxy.1
title: PMO SO

description: PMO Service Offerings
DOI: 10.17632/nv49tb4rgv
title: Geochronological and geochemical data of Late Cretaceous Rebang granitic dikes in northern Tibet

description: Table S1. Zircon U–Pb age data for the Rebang granitic dikes in the central Tibet.
Table S2. Zircon trace element data (ppm) for the Rebang granitic dikes in the central Tibet.
Table S3. Major (wt.%) and trace (ppm) element data for the Rebang granitic dikes in the central Tibet.
Table S4. Zircon Hf isotopic data for the Rebang granitic dikes in the central Tibet.
Table S5. Sr–Nd isotopic compositions of the Rebang granitic dikes in the central Tibet.
DOI: 10.17632/nv49tb4rgv.2
title: Geochronological and geochemical data of Late Cretaceous Rebang granitic dikes in northern Tibet

description: Table S1. Zircon U–Pb age data for the Rebang granitic dikes in the central Tibet.
Table S2. Zircon trace element data (ppm) for the Rebang granitic dikes in the central Tibet.
Table S3. Major (wt.%) and trace (ppm) element data for the Rebang granitic dikes in the central Tibet.
Table S4. Zircon Hf isotopic data for the Rebang granitic dikes in the central Tibet.
Table S5. Sr–Nd isotopic compositions of the Rebang granitic dikes in the central Tibet.
DOI: 10.17632/vwn4j23m84
title: TM9SF3 is a Golgi-resident ATG8-binding protein essential for Golgi selective autophagy

description: This dataset contains the complete set of full, uncropped Western blot images corresponding to all Western blot panels presented in the main and supplementary figures of the manuscript entitled "TM9SF3 is a Golgi-resident ATG8-binding protein essential for Golgi selective autophagy". All Western blot images are provided in their original form, without cropping or modification. 
This dataset is intended to support reproducibility and promote transparency in data presentation.
DOI: 10.17632/vwn4j23m84.1
title: TM9SF3 is a Golgi-resident ATG8-binding protein essential for Golgi selective autophagy

description: This dataset contains the complete set of full, uncropped Western blot images corresponding to all Western blot panels presented in the main and supplementary figures of the manuscript entitled "TM9SF3 is a Golgi-resident ATG8-binding protein essential for Golgi selective autophagy". All Western blot images are provided in their original form, without cropping or modification. 
This dataset is intended to support reproducibility and promote transparency in data presentation.
DOI: 10.15468/dl.szegpg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cocconeis pediculus Ehrenberg, 1838",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((27.1332 -20.158,25.5395 -23.2724,25.5395 -24.0715,30.5701 -24.0715,30.5701 -20.3186,29.6496 -19.6123,28.947 -19.4003,28.1821 -19.4609,27.6072 -19.7214,27.1332 -20.158))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057324-250525065834625/datasets/export for details.
DOI: 10.15468/dl.79s4u5
title: Occurrence Download

description: A dataset containing 12838 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "TaxonKey is Terminalia leiocarpa (DC.) Baill."
 ]
}

 The dataset includes 12838 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057326-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d2n2nz
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chiloglanis niger Roberts, 1989",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((50.7597 -16.0878,50.8081 -15.9401,46.1382 -15.9401,46.1382 -24.9401,47.6434 -24.9401,49.8893 -18.4615,50.0065 -17.575,50.4326 -17.1196,50.4413 -16.4368,50.7597 -16.0878))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057327-250525065834625/datasets/export for details.
DOI: 10.15468/dl.nrbjfn
title: Occurrence Download

description: A dataset containing 12838 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "TaxonKey is Terminalia leiocarpa (DC.) Baill."
 ]
}

 The dataset includes 12838 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057329-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15527509
title: A Comprehensive Water Stress Database for the Continental United States

description: -------------------------------------------------------------------------------------------------------A Comprehensive Water Stress Database for the Continental United States-------------------------------------------------------------------------------------------------------

This dataset serves as the foundation for analyzing water stress across the **contiguous United States** at the **daily and county level**. It supports the modeling and estimation of water supply, water demand, and water stress metrics using publicly available data.

## Contents

The dataset includes the following components:

- `input/`: Contains all input data required to estimate daily water supply and demand.- `supply_demand/`: Stores output data from the water supply and demand estimation models.- `nwsi_res/`: Includes final results for water stress levels calculated using the normalized water stress index (NWSI) metric.- `a1_calculate_supply.m` and `a2_calculate_demand.m`: Use input data to estimate supply and demand.- `b1_b2_calculate_stress.m`: Computes water stress from supply and demand data.- `nwsi.m`: Function script to calculate NWSI.- Output file definitions and data descriptions are included within the scripts.
DOI: 10.15468/dl.54cwgt
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "TaxonKey is Liolaemus puna Lobo & Espinoza, 2004"
 ]
}

 The dataset includes 13 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057330-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2t48qj
title: Occurrence Download

description: A dataset containing 102081 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is India Biodiversity Portal publication grade dataset"
 ]
}

 The dataset includes 102081 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057313-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uzrj7c
title: Occurrence Download

description: A dataset containing 12838 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Benin",
 "OccurrenceStatus is Present",
 "TaxonKey is Terminalia leiocarpa (DC.) Baill."
 ]
}

 The dataset includes 12838 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057332-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w9fvvk
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cocconeis pediculus Ehrenberg, 1838",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((25.0214 -34.0501,25.5395 -34.1098,25.5395 -32.9007,20.509 -32.9007,20.509 -34.5676,20.524 -34.555,20.8859 -34.5419,20.9606 -34.4398,21.2995 -34.5131,21.5296 -34.4338,21.8696 -34.4439,22.0323 -34.2835,22.221 -34.2428,22.2566 -34.1304,22.5993 -34.0741,22.9652 -34.1674,23.4069 -34.1858,23.4955 -34.0792,23.6056 -34.0563,24.8471 -34.2877,24.9447 -34.2397,25.0214 -34.0501))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057331-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sn9cdf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chiloglanis niger Roberts, 1989",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((54.9802 -21.6309,55.1382 -21.6954,55.1382 -20.4922,54.9305 -20.5721,54.7205 -21.0668,54.9802 -21.6309))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057333-250525065834625/datasets/export for details.
DOI: 10.15468/dl.ysnqn5
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-97.64723 -10.75579,-61.35277 -10.75579,-61.35277 3.75579,-97.64723 3.75579,-97.64723 -10.75579))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pristimantis tiktik Székely, Eguiguren, Székely, Ordóñez-Delgado, Armijos-Ojeda, Riofrîo-Guamán & Cogalniceanu, 2018"
 ]
}

 The dataset includes 11 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057334-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k27wr5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chiloglanis niger Roberts, 1989",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((54.0525 -15.9401,54.0428 -16.0473,54.3021 -16.346,54.6845 -16.3729,54.991 -16.0875,54.9903 -15.9401,54.0525 -15.9401))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057335-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.14651194
title: MEANtools is a computational pipeline that integrates multi-omics data to identify metabolites and predict biosynthetic pathways

description: MEANtools is a computational pipeline that integrates multi-omics data to identify metabolites and predict biosynthetic pathways

https://www.biorxiv.org/content/10.1101/2024.12.22.629970v1

This repository contains data for the meantools repository https://github.com/kumarsaurabh20/meantools 

Data:



Lotus database in SQLite format

RetroRules formatted data (loose, medium, and strict datasets) 

EC-pfam IDs map

RNA-seq expression matrix (normalized) from Jeon et al. 2020

Jeon_bacterial.sqlite (output of gene-metabolite correlations, calculated edge-scores and functional clusters for Bacterial samples)

Jeon_Fungal.sqlite (output of gene-metabolite correlations, calculated edge-scores and functional clusters for Fungal samples)
DOI: 10.5281/zenodo.15697913
title: MEANtools is a computational pipeline that integrates multi-omics data to identify metabolites and predict biosynthetic pathways

description: MEANtools is a computational pipeline that integrates multi-omics data to identify metabolites and predict biosynthetic pathways

https://www.biorxiv.org/content/10.1101/2024.12.22.629970v1

This repository contains data for the meantools repository https://github.com/kumarsaurabh20/meantools 

Data:



Lotus database in SQLite format

RetroRules formatted data (loose, medium, and strict datasets) 

EC-pfam IDs map

RNA-seq expression matrix (normalized) from Jeon et al. 2020

Jeon_bacterial.sqlite (output of gene-metabolite correlations, calculated edge-scores and functional clusters for Bacterial samples)

Jeon_Fungal.sqlite (output of gene-metabolite correlations, calculated edge-scores and functional clusters for Fungal samples)
DOI: 10.15468/dl.zz68nt
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cocconeis pediculus Ehrenberg, 1838",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((31.8862 -21.3285,30.5701 -20.3186,30.5701 -24.0715,35.5909 -24.0715,35.6007 -24.0157,35.6007 -23.8125,35.4969 -23.7035,35.6007 -23.165,35.6007 -22.9702,35.227 -22.2482,34.6862 -21.6944,34.013 -21.3095,33.5 -21.1593,32.9675 -21.1092,32.4352 -21.1612,31.8862 -21.3285))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057336-250525065834625/datasets/export for details.
DOI: 10.15468/dl.zsvfnf
title: Occurrence Download

description: A dataset containing 2208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Dendrobaena octaedra (Savigny, 1826)"
 ]
}

 The dataset includes 2208 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057337-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ecevw7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chiloglanis niger Roberts, 1989",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((46.8009 -14.7158,46.1382 -15.1614,46.1382 -15.9401,50.8081 -15.9401,50.9712 -15.4415,50.3203 -12.5851,49.5255 -11.523,49.0875 -11.4772,48.2794 -11.911,48.1654 -12.5557,47.3945 -13.3102,47.2457 -14.0495,46.8009 -14.7158))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0057338-250525065834625/datasets/export for details.