cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.5248s/28
title: catechol 2,3-dioxygenase C-terminal domain with extra-domain region ARB output.nex
DOI: 10.5061/dryad.5248s/29
title: catechol 2,3-dioxygenase C-terminal domain with intra-domain region ARB output.nex
DOI: 10.5061/dryad.5248s/30
title: catechol 2,3-dioxygenase N-terminal domain ARB output.nex
DOI: 10.5061/dryad.5248s/31
title: catechol 2,3-dioxygenase N-terminal domain with extra-domain region ARB output.nex
DOI: 10.5061/dryad.5248s/32
title: catechol 2,3-dioxygenase N-terminal domain with intra-domain region ARB output.nex
DOI: 10.5061/dryad.5248s/33
title: ferredoxin-like peptide ARB output.nex
DOI: 10.5061/dryad.5vr51/1
title: Bailey_Macleod_Accuracy

description: Female accuracy data in SAS format.
DOI: 10.5061/dryad.5vr51/2
title: Bailey_Macleod_Latency

description: Female latency data in SAS format.
DOI: 10.5061/dryad.5vr51/3
title: Bailey_Macleod_Responsiveness

description: Female responsiveness data in SAS format.
DOI: 10.5061/dryad.6dn5p/4
title: BRCA1 Alignment

description: Nexus file containing phased alleles from BRCA1 sequences of Javan Crocidura.  This alignment was used to generate the gene tree in Figure S1.
DOI: 10.5061/dryad.6dn5p/5
title: GHR Alignment

description: Nexus file containing phased alleles from GHR sequences of Javan Crocidura.  This alignment was used to generate the gene tree in Figure S1.
DOI: 10.5061/dryad.6dn5p/6
title: MCGF Alignment

description: Nexus file containing phased alleles from MCGF sequences of Javan Crocidura.  This alignment was used to generate the gene tree in Figure S1.
DOI: 10.5061/dryad.6dn5p/7
title: PTGER4 Alignment

description: Nexus file containing phased alleles from PTGER4 sequences of Javan Crocidura.  This alignment was used to generate the gene tree in Figure S1.
DOI: 10.5061/dryad.6dn5p/8
title: RAG1 Alignment

description: Nexus file containing phased alleles from RAG1 sequences of Javan Crocidura.  This alignment was used to generate the gene tree in Figure S1.
DOI: 10.5061/dryad.6dn5p/9
title: vWF Alignment

description: Nexus file containing phased alleles from vWF sequences of Javan Crocidura.  This alignment was used to generate the gene tree in Figure S1.
DOI: 10.5061/dryad.70mv450r/1
title: timema454_contigs
DOI: 10.5061/dryad.70mv450r/2
title: timema454_singletons_1sthalf
DOI: 10.5061/dryad.70mv450r/3
title: timema454_singletons_2ndhalf
DOI: 10.5061/dryad.7fr20/15
title: Supplementary Dataset 13. Enriched GO terms for differentially expressed transcripts

description: Supplemental Dataset 13. GO terms enriched for shared transcripts upregulated or downregulated for each dodder developmental stage compared to all other stages: seeds(sheet 1); seedlings (sheet 2); stem (sheet 3); prehaustoria (sheet 4); haustoria (sheet4) and flowers (sheet 5).
DOI: 10.5061/dryad.7fr20/16
title: Supplementary Dataset 14: Non-annotated transcripts differentially expressed in dodder infective stages

description: Supplemental Dataset 14. List of non-annotated transcripts showing differential expression (logFC " 1; FDR &lt; 0.05) in prehaustorial and haustorial stages compared to seedlings and stems. Column titles: (1) Contig ID, (2) Trinity identifier, (3) length of contig and (4) ORF prediction.
DOI: 10.5061/dryad.7fr20/17
title: Supplementary Dataset 15: Transcripts underlying GO-terms transport (GO:0006810) and transporter (GO:0005215) showing increased expression in preahustoria and haustoria.

description: Supplemental Dataset 15. Transcripts underlying GO-terms transport (GO:0006810) and transporter (GO:0005215) represented among upregulated genes in prehaustorial stagecompared to seedlings and stems (sheet 1), and in haustorial stage compared to prehaustoria, seedlings and stems (sheet 2).
DOI: 10.5061/dryad.87v3v/1
title: QA-1950 Python all results 6-25-2013
DOI: 10.5061/dryad.87v3v/2
title: ABI Fragment analysis PybiCB3 Pentest II 6-18-13_15 minutes only

description: ABI fragment analysis screen shot to show peaks generated when using the primers we developed in Pen test II plus flourescent labels.
DOI: 10.5061/dryad.87v3v/3
title: Gel PybiCB3 Pentest II 6-18-13_15 minutes only

description: Picture of bands generated by running PCR product using the primers we dveloped in Pen test II (unlabeled) on agarose gel.
DOI: 10.5061/dryad.87v3v/4
title: PybiCB3 primers full sequence

description: FASTA file showing sequence produced from PCR product using primers we develeoped in Pen Test II
DOI: 10.5061/dryad.8hb23/1
title: Collection of all files
DOI: 10.5061/dryad.905j6/1
title: Sinclair et al_all data
DOI: 10.5061/dryad.bt612/1
title: G. pallidipes microsatellites data - Busia, Rukomeshi, IAEA - Ciosi et al 2014 - PLOS NTD

description: The file "2013-06-10 BUS+IAEA2012-2013+Zim_ALPHA&BETA.xlsx" contains the genotypes of 121 Glossina pallidipes individuals from two field population samples (Busia and Rukomeshi) and from two samples from the IAEA laboratory colony.These genotypic data have been used in the publication by Ciosi et al. 2014 PLOS Neglected Tropical Diseases untitled "Laboratory colonisation and genetic bottlenecks in the tsetse fly Glossina pallidipes"
DOI: 10.5061/dryad.ct40s/51
title: Dromaius R1717 caudal vert
DOI: 10.5061/dryad.ct40s/52
title: Zenaita 241897
DOI: 10.5061/dryad.ct40s/53
title: Dromaius R1717 coracoid
DOI: 10.5061/dryad.ct40s/54
title: Dromaius R1717 dorsal rib
DOI: 10.5061/dryad.ct40s/55
title: Dromaius R1717 femur
DOI: 10.5061/dryad.ct40s/56
title: Dromaius R1717 fibula
DOI: 10.5061/dryad.ct40s/57
title: Dromaius R1717 frontal
DOI: 10.5061/dryad.ct40s/58
title: Dromaius R1717 furcula
DOI: 10.5061/dryad.ct40s/59
title: Dromaius R1717 humerus
DOI: 10.5061/dryad.f1r72/1
title: R-code for generating figure 2

description: Code used to evaluate significance of diversification plateau, as shown in Figure 2.
DOI: 10.5061/dryad.f1r72/2
title: BEAST xml file

description: The BEAST xml file, including sequence data, calibration points, and parameter settings used to generate Figure 1.
DOI: 10.5061/dryad.gd771/1
title: Monterey 2008 high density genotypes

description: Brood and adult genotypes at 4 microsatellite loci for the barnacle Tetraclita rubesens from high density patches in Monterey Bay in 2008.
DOI: 10.5061/dryad.gd771/2
title: Monterey 2007 low density genotypes

description: Brood and adult genotypes at 4 microsatellite loci for the barnacle Tetraclita rubesens from low density patches in Monterey Bay in 2007.
DOI: 10.5061/dryad.j512f21p/5
title: 2011-11-02 prayle hurley smyth supplementary file 1 STROBE checklist

description: This is a STROBE checklist for the study
DOI: 10.5061/dryad.j512f21p/6
title: 2011-10-31 Prayle Hurley Smyth Supplementary file 2 examples of categorization

description: This is a supplementary file which illustrates some of the decisions which had to be made when categorizing trials.
DOI: 10.5061/dryad.j512f21p/7
title: 2011-10-31 Prayle Hurley Smyth Supplementary file 3 variables in the dataset

description: This file lists and describes the sources of all the variables used in the final analysis.
DOI: 10.5061/dryad.jd183/13
title: fasta_files51-55
DOI: 10.5061/dryad.jd183/14
title: fasta_files56-60
DOI: 10.5061/dryad.jd183/15
title: fasta_files61-65
DOI: 10.5061/dryad.jd183/16
title: fasta_files66-70
DOI: 10.5061/dryad.jd183/17
title: fasta_files71-75
DOI: 10.5061/dryad.jd183/18
title: fasta_files76-80
DOI: 10.5061/dryad.jd183/19
title: fasta_files86-90
DOI: 10.5061/dryad.jd183/3
title: fasta_files81-85
DOI: 10.5061/dryad.jn7b2/5
title: GARLI configuration file for best tree

description: Settings used to generate the best ML tree in GARLI.  This example is for cytb, but the settings were the same for each of the three datasets analysed except the number of attachments (which was twice the number of OTUs), outgroup and the model of sequence evolution.
DOI: 10.5061/dryad.jn7b2/6
title: GARLI configuration file for bootstrapping

description: Settings used to generate 250 ML bootstrap replicates in GARLI.  This example is for cytb, but the settings were the same for each of the three datasets analysed except the number of attachments (which was twice the number of OTUs), outgroup and the model of sequence evolution.
DOI: 10.5061/dryad.k58bd/1
title: Latency to copulation data w/ one female

description: The time to copulation in seconds for males from different experimental populations when paired with one virgin, receptive female
DOI: 10.5061/dryad.kj0tj/1
title: Hmax_trnscriptm_assmbly

description: 16,681 assembled contigs obtained from sequencing the Helianthus maximiliani transcriptome
DOI: 10.5061/dryad.nv1sv92n/1
title: Lendemer_and_Hodkinson_2009_Cladonia_ITS

description: Nexus formatted alignment of nuITS sequences used for molecular phylogenetic analyses in this study.
DOI: 10.5061/dryad.pf2r0/1
title: Ant.Plant.Mutualists.Fragmentation
DOI: 10.5061/dryad.qh1n088f/1
title: A.tabira_summary_data.

description: Sample locality, subspecies, habitat type, host mussel, and dimensions of females and mature eggs for Acheilognathus tabira. All data were collected from field-collected samples.
DOI: 10.5061/dryad.qr92p/1
title: Results Evolution13-0929

description: Please see comments boxes in spreadsheet for a description of data contents.
DOI: 10.5061/dryad.qv42j11b/1
title: Lendemer_and_Hodkinson_Punctelia_ITS

description: Nexus file of aligned DNA sequences used for molecular phylogenetic analyses carried out for the study.
DOI: 10.5061/dryad.r9693/1
title: Figure 1 Bayesian trees

description: ZIP file containing Figure 1 Bayesian trees and alignments in Nexus format.
DOI: 10.5061/dryad.r9693/2
title: Figure S2 Bayesian trees

description: ZIP file containing Figure S2 trees and alignments in Nexus format.
DOI: 10.5061/dryad.r9693/3
title: Figure S3 ML trees

description: ZIP file containing Figure S3 Maximum Likelihood trees and alignments in Nexus format.
DOI: 10.5061/dryad.r9693/4
title: Figure S4_recA1 A2 Bayesian tree

description: Figure S4 tree and alignment in Nexus format.
DOI: 10.5061/dryad.rn636/1
title: AlignmentBNEAF

description: Sequence alignment of 860 fish DNA barcodes
DOI: 10.5061/dryad.vs49s/2
title: S2

description: alignment of first and the second codon positions 25246 positions in length
DOI: 10.5061/dryad.vs49s/3
title: S3

description: OV sorted version of the 40553 pos. long alignment
DOI: 10.5061/dryad.vs49s/4
title: S4

description: 31674 positions long alignment, maintaining the reading frame
DOI: 10.5061/dryad.vs49s/5
title: S5

description: NNet split networks for S1 and S4 alignments
DOI: 10.5061/dryad.vs49s/6
title: S6

description: zip archive containing scripts used in the paper
DOI: 10.5061/dryad.1cq8n52h/1
title: Data_file

description: Presence/absence matrix of 112 amphibian species occurring in the Mediterranean Region throughout a system of operational geographic units (OGUs) based on river basins, by merging the Level 6 subdivisions of the US Geological Survey (1997) HYDRO1k data set for Europe and Africa. Distribution maps of the extent of occurrence for each amphibian species known to inhabit the study area were downloaded from the IUCN Red List of Threatened Species, version 2010.4 (http://www.iucnredlist.org, downloaded on 1 April 2010).
DOI: 10.5061/dryad.1dj62/1
title: Code to replicate the analysis and generate Figure 1

description: A dynamic document for running the analysis and generating the data and graphs shown in Figure 1.  After installing the packages indicated, this code can be run by copy-pasting the code blocks into any R terminal, or compiled at once by running `knit("Figure1.Rmd")` in the R terminal using the knitr package.
DOI: 10.5061/dryad.1dj62/2
title: Data from: No early warning signals for stochastic transitions: insights from large deviation theory

description: A csv file containing the raw data shown in Figure 1.  This data can also be re-generated using the code provided in the dynamic documentation file (Figure1.Rmd)
DOI: 10.5061/dryad.2k67m/1
title: Setaria Morphological Character Measurements

description: This file contains all morphological measurements of Setaria pumila, S. faberi, and S. viridis, used in principal components analyses for the publication. The characters measured are described in detail in the publication.
DOI: 10.5061/dryad.44954v8f/1
title: incana_data_files

description: This is a compressed .zip folder containing three nexus formatted files of DNA sequence alignments used for the molecular phylogenetic analyses in this study. The MP and ML files were input into PAUP. The BI file into MrBayes. Refer to the methods section of the paper for additional explanation.
DOI: 10.5061/dryad.4b2t6/1
title: Degradation Experiment Algae Nutrition and Weight. A Canadian Healthy Oceans Network Ecosystem Function Project, EF-11

description: This experiment monitored the nutritional characteristics of two algal species, one invasive (Codium fragile) and one native (Saccharina latissima) during degradation on sediments offshore of a shallow kelp bed. Twenty four mesh bags, each containing ~500g of either C. fragile or S. latissima were contained in cages and placed on sediments at 19 m water depth (2 species x 12 replicates = 24 total bags). Three bags of each species were collected at roughly monthly intervals. Change in mass from time 0 was then measured and used to calculate degradation rate. Stable isotope ratios of d13C and d15N, %C, %N, C/N and concentration of Dimethylsulfoniopropionate were measured on each sample. At each sampling time (T0, T1, T2, T3 = 0, 28, 56, 85, and 112 days) the same measures were taken on three control samples of C. fragile and S. latissima collected from the shallow algal bed (~5 m depth) inshore of the experiment location. Sample ID is a unique sample number, Treatment ID is the treatment number, Group indicates weather the sample was from the degradation or control group, and initial weight and final weight indicate the weight of the sample at T0 and at the time it was collected. Measures of changes in mass were not applicable in the control treatments, as these represent live algae in the shallows
DOI: 10.5061/dryad.4b2t6/2
title: Degradation Experiment Animal Abundances. A Canadian Healthy Oceans Network Ecosystem Function Project, EF-11

description: At each sampling interval, the communities of organisms (body size &gt; 1 mm) found on each degrading algal sample were collected, identified and enumerated. This data sheet shows the abundances of each species identified on each sample.
DOI: 10.5061/dryad.50hd2/1
title: Molinari_Abundance Metric and Trait Data

description: This file includes trait data (SLA, peak timing of flowering, plant height, seed size and weight) for all grasslands species encountered in our surveys. SLA was collected by sampling plants from the field, while other traits were acquired using field guides (mainly the Jepson Manual of Higher Plants). The abundance metric was calculated as the difference between the species' abundance in native (Nassella pulchra) and exotic (Bromus diandrus) dominated grasslands.
DOI: 10.5061/dryad.5248s/34
title: acetaldehyde dehydrogenase dimerisation domain Mr Bayes output.nex.con.tre
DOI: 10.5061/dryad.5248s/35
title: catechol 2,3-dioxygenase C-terminal domain with extra-domain region Mr Bayes output.nex.con.tre
DOI: 10.5061/dryad.5248s/36
title: catechol 2,3-dioxygenase C-terminal domain Mr Bayes output.nex.con.tre
DOI: 10.5061/dryad.5248s/37
title: catechol 2,3-dioxygenase C-terminaldomain with intra-domain region Mr Bayes output.nex.con.tre
DOI: 10.5061/dryad.5248s/38
title: acetaldehyde dehydrogenase NAD binding domain Mr Bayes output.nex.con.tre
DOI: 10.5061/dryad.5248s/40
title: 4-hydroxy-2-oxopentanoate aldolase HMGL-like domain Mr Bayes output.nex.con.tre
DOI: 10.5061/dryad.5248s/41
title: 4-hydroxy-2-oxopentanoate aldolase DmpG-like domain Mr Bayes output.nex.con.tre
DOI: 10.5061/dryad.5248s/42
title: 2-oxopent-4-enoate hydratase Mr Bayes output.nex.con.tre
DOI: 10.5061/dryad.5h951h04/1
title: labroidALL phy

description: Sequence data set used in phylogenetic analyses presented in this submitted manuscript. These are DNA sequences from 188 species of acanthomorph fishes and 10 coding nuclear genes each.
DOI: 10.5061/dryad.69p9p/1
title: Morphological measurements for the Gosner stage 39 tadpole of K. taprobanica.

description: The data was taken from the 5 specimens which were collected in the field. The measurements were taken with a digital vernier caliper (precision of 0.1 mm) which are body length (BL), tail length (TAL), total length (BL+TAL=TL), body height (BH), head width at the level of eyes (HW), tail muscle height at base of tail (TMH), dorsal fin height (UTF), ventral fin height (LTF), maximum height of tail (MTH), eye-naris distance (END), naris-snout distance (NSD), snout-spiracle distance (SSD) , internarial distance (IND) and interorbital distance (IOD)
DOI: 10.5061/dryad.70mv450r/4
title: CaliPopp_allo_IMa
DOI: 10.5061/dryad.70mv450r/5
title: CaliPopp_para_complete_IMa
DOI: 10.5061/dryad.70mv450r/6
title: cris_allo_CO1_IMa
DOI: 10.5061/dryad.7c04d/1
title: Facial Images

description: Facial images used for the individual identification of the worm pipefish. Each pipefish as two images (of the right and left side of the face) in each of the capture events.
DOI: 10.5061/dryad.7c04d/2
title: genotypes

description: Excel table with obtained genotypes for the set of 8 microsatellites. Sample information (including sex, length and reference to photo files) is also provided.
DOI: 10.5061/dryad.7kd15/1
title: Parent-offspring dataset_for dryad

description: includes microsatellite data for four known mother-offspring families
DOI: 10.5061/dryad.7kd15/2
title: Recapture dataset_for dryad

description: includes microsatellite data for recaptures, end of file quantifies # comparisons
DOI: 10.5061/dryad.7kd15/3
title: Repeat Genotypes dataset_for dryad

description: includes microsatellite data for repeated samples
DOI: 10.5061/dryad.82vg8/1
title: Hanfling Table S1

description: Sample locations, taxa and Genbank accession numbers
DOI: 10.5061/dryad.82vg8/2
title: Supermatrix alignment NiphargusOTUs plus outgroups

description: Supermatrix of 6 genetic loci and 170 taxa  used in the phylogenetic analysis (FASTA format). Locus = alignment site numbers: 12S = 1-505; 16S = 506-1614; 18S = 1615-4357; 28S = 4358-6163; CO1 = 6164-7046; EF1a = 7047-7647
DOI: 10.5061/dryad.84c26/1
title: Pollen and seed production for Elymus virginicus

description: Collected in the greenhouse, created in Excel.
DOI: 10.5061/dryad.84c26/2
title: Seed germination for Elymus virginicus

description: Data collected in the lab on Petri plates of water agar using seeds collected from experimental populations in the field, created in Excel.  Indiv is the individual seed identity. Plate is the unique Petri plate identifier, plot is the experimental plot from the field (see text), germ is binary 0/1 whether or not seed germinated.
DOI: 10.5061/dryad.84c26/3
title: Pollen grain size for Elymus virginicus

description: Data collected on plastic containers from pollen collected in the greenhouse, file created in Excel.  Area is the average area of 5 pollen grains per individual plant measured in square microns.
DOI: 10.5061/dryad.8p1t6/1
title: Nishi Microarray data

description: Original microarray data (AF patients and Control patients)
DOI: 10.5061/dryad.8v684/1
title: West WB longterm weekly chem data_sequential 1989 to 2008_4Mar09
DOI: 10.5061/dryad.8v684/2
title: West WBW ave daily discharge_1989 to 2008
DOI: 10.5061/dryad.91d71/1
title: Appendix 2 - Data Tables

description: All measurements, morphometric, and statistical data associated with this project and referred to within the manuscript.
DOI: 10.5061/dryad.cs31j/1
title: An experimental study of strong reciprocity in bacteria

description: Included in this file are the colony forming unit (CFU) counts for each competition between strains over time. Proportions of each strain are calculated and can be seen in figure 1 in the associated publication.
DOI: 10.5061/dryad.ct40s/60
title: Dromaius R1717 ischium
DOI: 10.5061/dryad.ct40s/61
title: Dromaius R1717 pubis
DOI: 10.5061/dryad.ct40s/62
title: Dromaius R1717 metacarpals
DOI: 10.5061/dryad.ct40s/63
title: Dromaius R1717 pedal phalanx
DOI: 10.5061/dryad.ct40s/64
title: Dromaius R1717 manual phalanx
DOI: 10.5061/dryad.ct40s/65
title: Dromaius R1717 scapula
DOI: 10.5061/dryad.ct40s/66
title: Dromaius R1717 radius
DOI: 10.5061/dryad.ct40s/67
title: Dromaius R1717 scleral ossicle
DOI: 10.5061/dryad.ct40s/68
title: Dromaius R1717 tarsometatarsus
DOI: 10.5061/dryad.gd771/3
title: Bodega 2007 low density genotypes

description: Brood and adult genotypes at 4 microsatellite loci for the barnacle Tetraclita rubesens from high density patches in Bodega Bay in 2007.
DOI: 10.5061/dryad.gd771/4
title: Attributes of potential fathers

description: Attributes of potential sires in the mating group of each focal individual with a  brood, used to analyze factors predicting paternity success. "Distance" is the pairwise distance between potential sire and individual with the focal brood. "Bodymass" is the dry weight of all soft tissues of potential sire (g). "maleinvest" is dry weight of penis + testes + seminar vesicles" (g). "reciprocity" 1 if this individual's brood was sired by the focal individual 0 if not. "success" 1 if this individual is the inferred father of the focal brood, 0 if not. "density" 1 if mating group is from a high density patch, 0 if not.
DOI: 10.5061/dryad.h73b0/1
title: Meisner Field Data

description: Field data of pea aphids and A. ervi at the Arlington Agricultural Field Station, WI, 1995-1997
DOI: 10.5061/dryad.h73b0/2
title: Meisner Longterm Cage Data

description: Long-term population dynamics of pea aphids and A. ervi in laboratory cages at 20C and 27C
DOI: 10.5061/dryad.h748p/1
title: Pythium aphanidermatum DAOM BR444 Genome Assembly and Annotation

description: Pythium aphanidermatum DAOM BR444 Genome Assembly and Annotation Contents: pag1_functional_annotation.txt; pag1.maker.proteins.fasta; pag1.maker.transcripts.fasta; pag1_scaffolds_asm.fasta; pag1_scaffolds_asm.maker.gff3
DOI: 10.5061/dryad.h748p/2
title: Pythium arrhenomanes ATCC 12531 Genome Assembly and Annotation

description: Pythium arrhenomanes ATCC 12531 Genome Assembly and Annotation Contents: par_functional_annotation.txt; par.maker.proteins.fasta; par.maker.transcripts.fasta; par_contigs_asm.fasta; par_contigs_asm.maker.gff3
DOI: 10.5061/dryad.h748p/3
title: Pythium irregulare DAOM BR486 Genome Assembly and Annotation

description: Pythium irregulare DAOM BR486 Genome Assembly and Annotation Contents: pir_functional_annotation.txt; pir.maker.proteins.fasta; pir.maker.transcripts.fasta; pir_contigs_asm.fasta; pir_contigs_asm.maker.gff3
DOI: 10.5061/dryad.h748p/5
title: Pythium ultimum var. sporangiiferum BR650 Genome Assembly and Annotation

description: Pythium ultimum var. sporangiiferum BR650 Genome Assembly and Annotation Contents: pug3_functional_annotation.txt; pug3.maker.proteins.fasta; pug3.maker.transcripts.fasta; pug3_contigs_asm.fasta; pug3_contigs_asm.maker.gff3
DOI: 10.5061/dryad.h748p/6
title: Pythium vexans DAOM BR484 Genome Assembly and Annotation

description: Pythium vexans DAOM BR484 Genome Assembly and Annotation Contents: pve1_func_anno.list; pve.maker.proteins.fasta; pve.maker.transcripts.fasta; pve_contigs_asm.fasta; pve_contigs_asm.maker.gff3
DOI: 10.5061/dryad.hk45m/1
title: Input and output from BPP analyses

description: Compressed file containing input and output files from BPP analyses of the light-vented/Taiwan bulbul (Pycnonotus sinensis/P. taivanus) complex. Analyses include 4 taxa analyses, 5 taxa analyses, 5 taxa analyses using two alternative tree topologies, and geographic cluster analyses. Geographic cluster analyses include seperate analyses for sinensis, hainanus, and taivanus. All analyses were run using low, middle, and high theta priors.
DOI: 10.5061/dryad.jd183/20
title: fasta_files91-95
DOI: 10.5061/dryad.jd183/21
title: fasta_files96-100
DOI: 10.5061/dryad.jd183/22
title: fasta_files101-104