cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.dgp9rx
title: Occurrence Download

description: A dataset containing 1027 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-180 -71,180 -71,180 -69,-180 -69,-180 -71))",
 "HasCoordinate is true",
 "TaxonKey is Fungi",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1027 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006307-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uppqw8
title: Occurrence Download

description: A dataset containing 518 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cyprinodon pecosensis Echelle & Echelle, 1978"
 ]
}

 The dataset includes 518 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003871-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nqwmgl
title: Occurrence Download

description: A dataset containing 2589 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Asparagopsis armata Harv."
 ]
}

 The dataset includes 2589 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003872-150528172251762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fw46qs
title: Occurrence Download

description: A dataset containing 382789 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Ecuador",
 "DatasetKey is EOD – eBird Observation Dataset",
 "Month is December",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 2005-2021"
 ]
}

 The dataset includes 382789 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006793-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gfv79k
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Comparettia hauensteinii (Königer) M.W.Chase & N.H.Williams"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0144067-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5kckgc
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Comparettia jamiesonii (Lindl. & Paxton) M.W.Chase & N.H.Williams"
 ]
}

 The dataset includes 6 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0144073-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ujqdfp
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Australopithecus afarensis Johanson, White & Coppens, 1978"
 ]
}

 The dataset includes 47 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003872-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.afisuz
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 {
 "or" : [
 "Country is Myanmar",
 "Country is India",
 "Country is Malaysia",
 "Country is Viet Nam",
 "Country is Lao People’s Democratic Republic"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Tylonycteris pachypus fulvidus (Blyth, 1859)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 32 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006304-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gqfren
title: Occurrence Download

description: A dataset containing 43027 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "Geometry POLYGON((-105.534667 21.002471,-105.534667 18.708691,-103.513183 18.708691,-103.513183 21.002471,-105.534667 21.002471))"
 ]
}

 The dataset includes 43027 records from 94 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003872-150831095807960/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k52jvm
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Comparettia janeae (Dodson & R.Vásquez) M.W.Chase & N.H.Williams"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0144074-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vt38yn
title: Occurrence Download

description: A dataset containing 993 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Hypericum buckleyi M.A.Curtis",
 "TaxonKey is Fothergilla major (Sims) Lodd."
 ]
}

 The dataset includes 993 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016366-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hzey6n
title: Occurrence Download

description: A dataset containing 11065 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mahonia aquifolium (Pursh) Nutt.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11065 records from 147 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003872-150922153815467/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dzc3f9
title: Occurrence Download

description: A dataset containing 242 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Biodiversidad íctica de Providencia durante la Expedición Seaflower 2019 - Proyecto Colombia BIO"
 ]
}

 The dataset includes 242 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040257-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tpvwju
title: Occurrence Download

description: A dataset containing 1145 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Sostenibilidad del uso y manejo tradicional de la palma de guano (Sabal spp, Arecaceae) en el área maya de Yucatán"
 ]
}

 The dataset includes 1145 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016376-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gfvg4n
title: Occurrence Download

description: A dataset containing 49364 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Elodea nuttallii (Planch.) H.St.John",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 {
 "or" : [
 "Issue is Country coordinate mismatch",
 "Issue is Continent country mismatch",
 "Issue is Coordinate invalid",
 "Issue is Coordinate reprojection failed",
 "Issue is Presumed negated latitude",
 "Issue is Taxon match higher rank",
 "Issue is Coordinate out of range",
 "Issue is Country invalid",
 "Issue is Coordinate reprojection suspicious",
 "Issue is Presumed negated longitude",
 "Issue is Recorded date invalid",
 "Issue is Taxon match none",
 "Issue is Basis of record invalid",
 "Issue is Taxon match fuzzy",
 "Issue is Continent invalid",
 "Issue is Error during interpretation",
 "Issue is Zero coordinate",
 "Issue is Geodetic datum invalid",
 "Issue is Country mismatch",
 "Issue is Presumed swapped coordinate",
 "Issue is Coordinate rounded"
 ]
 }
 ]
}

 The dataset includes 49364 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003872-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qmqbhb
title: Occurrence Download

description: A dataset containing 360 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Damnacanthus macrophyllus Siebold ex Miq."
 ]
}

 The dataset includes 360 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020988-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dzvztn
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aves)",
 "HasCoordinate is one of (true)",
 "Geometry POLYGON((-76.4877315465989 3.16600765832001,-76.4689540702998 3.16600765832001,-76.4689540702998 3.18744898096942,-76.4877315465989 3.18744898096942,-76.4877315465989 3.16600765832001))"
 ]
}

 The dataset includes 19 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016378-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xai7ku
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amphiprion nigripes Regan, 1908"
 ]
}

 The dataset includes 87 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003872-160623103540712/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25605258
title: Supplementary material: Healthcare resources and costs associated with nonvalvular atrial fibrillation in Spain: apixaban versus acenocoumarol

description: <b>These are peer-reviewed supplementary materials for the article '</b><b>Healthcare resources and costs associated </b><b>with nonvalvular atrial fibrillation in Spain: </b><b>apixaban versus acenocoumarol</b><b>' published in the</b><b> </b><b><i>Journal of Comparative Effectiveness Research</i></b><b>.</b><b>Table S1: </b>Charlson comorbidity index<b>Table S2: </b>CHA2DS2-VASc score for stroke risk in atrial fibrillation<b>Table S3: </b>HAS-BLED score for bleeding risk on oral anticoagulation in atrial fibrillation<b>Table S4: </b>Detail of unit costs and work disability (year 2021)<b>Table S5: </b>Baseline patient characteristics by study group (N = 32,925, without PSM)<b>Table S6: </b>ICD-9-CM and ICD-10-CM codes used to define the results (effectiveness)<b>Aim: </b>Healthcare resources usage and costs associated to nonvalvular atrial fibrillation (NVAF) were analyzed in Spain. <b>Methods:</b> This is an observational and retrospective study on patients with NVAF who started their treatment with apixaban or acenocoumarol between 1 January 2015 and 31 December 2017. <b>Results:</b> 2160 patients treated with apixaban were paired (1:1) with patients treated with acenocoumarol (propensity score matching). Apixaban reduced the incidence of strokes and systemic embolisms, minor and major bleedings and deaths, versus acenocoumarol. Apixaban led to reductions of 80, 55 and 43% in costs related to nursing visits, hospitalizations, and emergency visits, respectively, leading to annual cost savings of €274/patient, from the perspective of society. <b>Conclusion:</b> Our results suggested that apixaban is a cost-effective alternative for patients with NVAF.
DOI: 10.15468/dl.cnod86
title: Occurrence Download

description: A dataset containing 3716 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-180 -61,180 -61,180 -59,-180 -59,-180 -61))",
 "HasCoordinate is true",
 "TaxonKey is Fungi",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3716 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006305-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j3uh4j
title: Occurrence Download

description: A dataset containing 18282 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calyptocarpus Less."
 ]
}

 The dataset includes 18282 records from 254 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0144051-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dxyvyj
title: Occurrence Download

description: A dataset containing 464 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Fig. 3) Absolute abundance of dead benthic foraminifera in sediment core PS1394-3"
 ]
}

 The dataset includes 464 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003872-160803222355964/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rxn8an
title: Occurrence Download

description: A dataset containing 5540 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Colección de peces de agua dulce del INCIVA"
 ]
}

 The dataset includes 5540 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040249-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6mjgat
title: Occurrence Download

description: A dataset containing 114080 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Balaenoptera physalus (Linnaeus, 1758)"
 ]
}

 The dataset includes 114080 records from 458 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030999-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hdue4q
title: Occurrence Download

description: A dataset listing the 359 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Ictiofauna de la Orinoquia Andina de Colombia"
 ]
}

 The dataset's 359 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031007-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10602767
title: BOston Neonatal Brain Injury Data for Hypoxic Ischemic Encephalopathy (BONBID-HIE): I. MRI and Manual Lesion Annotation

description: BOston Neonatal Brain Injury Dataset for Hypoxic Ischemic Encephalopathy (BONBID-HIE): Part I. MRI and Manual Lesion Annotation

Hypoxic ischemic encephalopathy (HIE) is a brain injury that occurs in 1 ∼ 5/1000 term neonates. Accurate identification and segmentation of HIE-related lesions in neonatal brain magnetic resonance images (MRIs) is the first step toward predicting prognosis, identifying high-risk patients, and evaluating treatment effects. It will lead to a more accurate estimation of prognosis, a better understanding of neurological symptoms, and a timely prediction of response to therapy. We release the first public dataset containing neonatal brain diffusion MRI and expert annotation of lesions from 133 patients diagnosed with HIE. HIE-related lesions in brain MRI are often diffuse (i.e., multi-focal), and small (over half the patients in our data having lesions occupying <1% of brain volume). Segmentation for HIE MRI data is remarkably different from, and arguably more challenging than, other segmentation tasks such as brain tumors with focal and relatively large lesions. We hope that this dataset can help fuel the development of MRI lesion segmentation methods for HIE and small diffuse lesions in general.

Contact: Rina Bao: Rina.Bao@childrens.harvard.edu Yangming Ou: Yangming.Ou@childrens.harvard.edu

License: All data has been made publicly available under the CC BY license (https://creativecommons.org/licenses/by/4.0/legalcode).

If you use this data, please cite our paper:@article{bao2023boston,  title={BOston Neonatal Brain Injury Dataset for Hypoxic Ischemic Encephalopathy (BONBID-HIE): Part I. MRI and Manual Lesion Annotation},  author={Bao, Rina and Song, Ya’nan and Bates, Sara V and Weiss, Rebecca J and Foster, Anna N and Cobos, Camilo Jaimes and Sotardi, Susan and Zhang, Yue and Gollub, Randy L and Grant, P Ellen and others},  journal={bioRxiv},  year={2023},  publisher={Cold Spring Harbor Laboratory Preprints}}
DOI: 10.5281/zenodo.8104103
title: BOston Neonatal Brain Injury Data for Hypoxic Ischemic Encephalopathy (BONBID-HIE): I. MRI and Manual Lesion Annotation

description: BOston Neonatal Brain Injury Dataset for Hypoxic Ischemic Encephalopathy (BONBID-HIE): Part I. MRI and Manual Lesion Annotation


Hypoxic ischemic encephalopathy (HIE) is a brain injury that occurs in 1 ∼ 5/1000 term neonates. Accurate identification and segmentation of HIE-related lesions in neonatal brain magnetic resonance images (MRIs) is the first step toward predicting prognosis, identifying high-risk patients, and evaluating treatment effects. It will lead to a more accurate estimation of prognosis, a better understanding of neurological symptoms, and a timely prediction of response to therapy. We release the first public dataset containing neonatal brain diffusion MRI and expert annotation of lesions from 133 patients diagnosed with HIE. HIE-related lesions in brain MRI are often diffuse (i.e., multi-focal), and small (over half the patients in our data having lesions occupying <1% of brain volume). Segmentation for HIE MRI data is remarkably different from, and arguably more challenging than, other segmentation tasks such as brain tumors with focal and relatively large lesions. We hope that this dataset can help fuel the development of MRI lesion segmentation methods for HIE and small diffuse lesions in general.


Contact: Rina Bao: Rina.Bao@childrens.harvard.edu Yangming Ou: Yangming.Ou@childrens.harvard.edu


License: All training data has been made publicly available under the CC BY NC ND license (https://creativecommons.org/licenses/by-nc-nd/2.0/, allowing academic use with credit, prohibiting commercial use without owner’s permission, and disallowing derivation or adaption of data).
DOI: 10.5281/zenodo.10045994
title: BOston Neonatal Brain Injury Data for Hypoxic Ischemic Encephalopathy (BONBID-HIE): I. MRI and Manual Lesion Annotation

description: BOston Neonatal Brain Injury Dataset for Hypoxic Ischemic Encephalopathy (BONBID-HIE): Part I. MRI and Manual Lesion Annotation
Hypoxic ischemic encephalopathy (HIE) is a brain injury that occurs in 1 ∼ 5/1000 term neonates. Accurate identification and segmentation of HIE-related lesions in neonatal brain magnetic resonance images (MRIs) is the first step toward predicting prognosis, identifying high-risk patients, and evaluating treatment effects. It will lead to a more accurate estimation of prognosis, a better understanding of neurological symptoms, and a timely prediction of response to therapy. We release the first public dataset containing neonatal brain diffusion MRI and expert annotation of lesions from 133 patients diagnosed with HIE. HIE-related lesions in brain MRI are often diffuse (i.e., multi-focal), and small (over half the patients in our data having lesions occupying <1% of brain volume). Segmentation for HIE MRI data is remarkably different from, and arguably more challenging than, other segmentation tasks such as brain tumors with focal and relatively large lesions. We hope that this dataset can help fuel the development of MRI lesion segmentation methods for HIE and small diffuse lesions in general.
Contact: Rina Bao: Rina.Bao@childrens.harvard.edu Yangming Ou: Yangming.Ou@childrens.harvard.edu
License: All training data has been made publicly available under the CC BY NC license (https://creativecommons.org/licenses/by-nc/4.0/legalcode.en, allowing academic use with credit, prohibiting commercial use without owner's permission, and disallowing derivation or adaption of data).
DOI: 10.5281/zenodo.8104102
title: BOston Neonatal Brain Injury Data for Hypoxic Ischemic Encephalopathy (BONBID-HIE): I. MRI and Manual Lesion Annotation

description: BOston Neonatal Brain Injury Dataset for Hypoxic Ischemic Encephalopathy (BONBID-HIE): Part I. MRI and Manual Lesion Annotation

Hypoxic ischemic encephalopathy (HIE) is a brain injury that occurs in 1 ∼ 5/1000 term neonates. Accurate identification and segmentation of HIE-related lesions in neonatal brain magnetic resonance images (MRIs) is the first step toward predicting prognosis, identifying high-risk patients, and evaluating treatment effects. It will lead to a more accurate estimation of prognosis, a better understanding of neurological symptoms, and a timely prediction of response to therapy. We release the first public dataset containing neonatal brain diffusion MRI and expert annotation of lesions from 133 patients diagnosed with HIE. HIE-related lesions in brain MRI are often diffuse (i.e., multi-focal), and small (over half the patients in our data having lesions occupying <1% of brain volume). Segmentation for HIE MRI data is remarkably different from, and arguably more challenging than, other segmentation tasks such as brain tumors with focal and relatively large lesions. We hope that this dataset can help fuel the development of MRI lesion segmentation methods for HIE and small diffuse lesions in general.

Contact: Rina Bao: Rina.Bao@childrens.harvard.edu Yangming Ou: Yangming.Ou@childrens.harvard.edu

License: All data has been made publicly available under the CC BY license (https://creativecommons.org/licenses/by/4.0/legalcode).

If you use this data, please cite our paper:@article{bao2023boston,  title={BOston Neonatal Brain Injury Dataset for Hypoxic Ischemic Encephalopathy (BONBID-HIE): Part I. MRI and Manual Lesion Annotation},  author={Bao, Rina and Song, Ya’nan and Bates, Sara V and Weiss, Rebecca J and Foster, Anna N and Cobos, Camilo Jaimes and Sotardi, Susan and Zhang, Yue and Gollub, Randy L and Grant, P Ellen and others},  journal={bioRxiv},  year={2023},  publisher={Cold Spring Harbor Laboratory Preprints}}
DOI: 10.15468/dl.dv9fnm
title: Occurrence Download

description: A dataset containing 145 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is China",
 "Geometry POLYGON((119.45925 39.58879,122.80208 39.58879,122.80208 41.52308,119.45925 41.52308,119.45925 39.58879))",
 "HasGeospatialIssue is false",
 "TaxonKey is Tadorna tadorna (Linnaeus, 1758)"
 ]
}

 The dataset includes 145 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031017-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.