cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3619001_d1.v1
title: Additional file 2: of Ultrasound-guided gastrocnemius recession: a new ultra–minimally invasive surgical technique

description: Clinical and functional data: Range of motion, AOFAS, VAS, and complications after gastrocnemius lengthening. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.c.3618785_d4.v1
title: Additional file 4: Table S4. of Comparative genomics of Clostridium bolteae and Clostridium clostridioforme reveals species-specific genomic properties and numerous putative antibiotic resistance determinants

description: Metabolic pathways for butyrate. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3618473_d1.v1
title: Additional file 1: of Characterization of common carp (Cyprinus carpio L.) interferon regulatory factor 5 (IRF5) and its expression in response to viral and bacterial challenges

description: Intron sequences of the ccIRF5 gene. Intron sizes are 495, 804, 225, 131, 88, 761, 518, and 766Â bp. (TXT 3 kb)
DOI: 10.6084/m9.figshare.c.3615005_d4.v1
title: Additional file 1: Table S1. of Pinpointing genes underlying annual/perennial transitions with comparative genomics

description: Information on D. nemorosa, D. hispanica, A. parviflora, A. verna and A. montbretiana including their accession numbers, source locations and donor. (XLSX 186 kb)
DOI: 10.15468/b2r797
title: A review of the bats (Chiroptera) of the Republic of Congo, including eight species new to the country

description: This dataset contains the digitized treatments in Plazi based on the original journal article Bates, Paul J. J., Cameron, Kenneth, Pearch, Malcolm J., Hayes, Benjamin (2013): A review of the bats (Chiroptera) of the Republic of Congo, including eight species new to the country. Acta Chiropterologica 15 (2): 313-340, DOI: 10.3161/150811013X678955
DOI: 10.6084/m9.figshare.c.3612452_d1.v1
title: Additional file 1 of CyTRANSFINDER: a Cytoscape 3.3 plugin for three-component (TF, gene, miRNA) signal transduction pathway construction

description: ∙ srl.txt: the file containing the SRL. ∙ dgl.txt: the file containing the DGL. ∙ Indirect-miRNA-STPP.xlsx: an excel file containing the full list of 312 Indirect miRNA STPPs identified by CyTRANSFINDER using human miR-146a as the source intergenic miRNA and miR-146a 223 target genes according to TargetScan 5.2 as DGL. Results are computed using miRNA targets confirmed in at lease one source database. SmiRNA: source intragenic miRNA; TF: Transcription Factor; DG: Destination Gene. (ZIP 201 kb)
DOI: 10.15468/rwh75w
title: Results of a recent bat survey in Upper Myanmar including new records from the Kachin forests

description: This dataset contains the digitized treatments in Plazi based on the original journal article Struebig, Matthew J., Rossiter, Stephen J., Bates, Paul J. J., Kingston, Tigga, Oo, Sai Sein Lin, Nwe, Aye Aye, Aung, Moe Moe, Win, Sein Sein, Mya, Khin Mya (2005): Results of a recent bat survey in Upper Myanmar including new records from the Kachin forests. Acta Chiropterologica 7 (1): 147-163, DOI: 10.3161/1733-5329(2005)7[147:ROARBS]2.0.CO;2
DOI: 10.6084/m9.figshare.c.3611495_d2.v1
title: MOESM2 of Chinaâ  s conversion of cropland to forest program: a systematic review of the environmental and socioeconomic effects

description: Additional file 2: Full bibliographies and data extraction of included studies.
DOI: 10.6084/m9.figshare.c.3611150_d3.v1
title: Additional file 4: of Integrated analysis of mRNA, microRNA and protein in systemic lupus erythematosus-specific induced pluripotent stem cells from urine

description: Table S4. Down-regulation of differentially expressed proteins. (XLSX 15 kb)
DOI: 10.15468/kwt7nz
title: A checklist of bats (Mammalia: Chiroptera) from Lao PDR

description: This dataset contains the digitized treatments in Plazi based on the original journal article Thomas, Nikky M., Duckworth, J. W., Douangboubpha, Bounsavane, Williams, Meredith, Francis, Charles M. (2013): A checklist of bats (Mammalia: Chiroptera) from Lao PDR. Acta Chiropterologica 15 (1): 193-260, DOI: 10.3161/150811013X667993
DOI: 10.6084/m9.figshare.c.3610436_d2.v1
title: Additional file 3: of How effective are on-farm mitigation measures for delivering an improved water environment? A systematic map

description: Access database of coded review evidence searchable by category.
DOI: 10.6084/m9.figshare.c.3610667_d3.v1
title: Additional file 6: of Rare and common epilepsies converge on a shared gene regulatory network providing opportunities for novel antiepileptic drug discovery

description: Enrichment for differentially expressed genes in epileptic hippocampi versus controls for several sets of genes. (XLSX 57 kb)
DOI: 10.6084/m9.figshare.c.3610436_d3.v1
title: Additional file 1: of How effective are on-farm mitigation measures for delivering an improved water environment? A systematic map

description: Spread sheet containing the exact search terms used.
DOI: 10.6084/m9.figshare.c.3609854_d3.v1
title: MOESM3 of Impact of aging on host immune response and survival in melanoma: an analysis of 3 patient cohorts

description: Additional file 3: Table S3. A Significant gene expression differences with aging in the IMCG primary melanoma cohort (n = 84). B Significant gene expression differences with aging in the TCGA primary melanoma cohort (n = 43).
DOI: 10.6084/m9.figshare.c.3610025_d7.v1
title: Additional file 4: Table S3. of The structure and diversity of human, animal and environmental resistomes

description: Beta-diversity analysis of resistance genes, MGEs and taxonomic compositions across environments. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.c.3609620_d2.v1
title: Additional file 10: Table S10. of RNA-seq-based digital gene expression analysis reveals modification of host defense responses by rice stripe virus during disease symptom development in Arabidopsis

description: DEGs involved in protein phosphorylation at 21 dpi. (XLS 17Â kb)
DOI: 10.6084/m9.figshare.c.3606647_d3.v1
title: Additional file 4: of Phylogenomics and sequence-structure-function relationships in the GmrSD family of Type IV restriction enzymes

description: The alignment of GmrD domain sequences used for tree calculations. (FASTA 35Â kb)
DOI: 10.6084/m9.figshare.c.3606146_d2.v1
title: Additional file 1: Table S1. of Identification by the DArTseq method of the genetic origin of the Coffea canephora cultivated in Vietnam and Mexico

description: List of plants evaluated with DarTseq markers. Table S2. List of DArTseq markers and used in the analysis. Table S3. Structural SNPs contributing to the population structure in C. canephora. Table S4. Putative outlier marker loci identified by the Fst outlier method implemented in Lositan. (XLSX 457Â kb)
DOI: 10.6084/m9.figshare.c.3605795_d1.v1
title: Additional file 1: Table S1. of Effects of dietary fat subtypes on glucose homeostasis during pregnancy in rats

description: Fatty acid composition in skeletal muscle and liver. This dataset included individual fatty acid profile in red quadriceps, soleus and liver of each animal. (XLSX 51 kb)
DOI: 10.6084/m9.figshare.c.3605024_d1.v1
title: Additional file 3: of The effectiveness of a mobile application for the development of palpation and ultrasound imaging skills to supplement the traditional learning of physiotherapy students

description: Database. (XLSX 14.6 kb)
DOI: 10.6084/m9.figshare.c.3603890_d6.v1
title: Additional file 5: of Insights into the innate immunome of actiniarians using a comparative genomic approach

description: Alignment used for CniFL genes phylogenetic analysis. (FASTA 4Â kb)
DOI: 10.5281/zenodo.3944685
title: The development dataset of the AI composition recognition competition, CSMT2020

description: The development dataset contains 6000 MIDI files with monophonic melodies generated by artificial intelligence algorithms. The tempo is between the 68bpm and 118bpm (beat per minute). The length of each melody is 8 bars, and the melody does not necessarily include complete phrase structures. There are two datasets with different music styles used as the training dataset of a certain number of algorithms, where the melodies in the development dataset are generated. The website of the challenge: http://www.csmcw-csmt.cn/data/2020/ai-composition-recognition2020 (Chinese instruction) https://ai-composition-recognition2020.github.io/english.html (English instruction)
DOI: 10.5281/zenodo.3944684
title: The development dataset of the AI composition recognition competition, CSMT2020

description: The development dataset contains 6000 MIDI files with monophonic melodies generated by artificial intelligence algorithms. The tempo is between the 68bpm and 118bpm (beat per minute). The length of each melody is 8 bars, and the melody does not necessarily include complete phrase structures. There are two datasets with different music styles used as the training dataset of a certain number of algorithms, where the melodies in the development dataset are generated. The website of the challenge: http://www.csmcw-csmt.cn/data/2020/ai-composition-recognition2020 (Chinese instruction) https://ai-composition-recognition2020.github.io/english.html (English instruction)
DOI: 10.6084/m9.figshare.c.3603461_d5.v1
title: Additional file 4: Table S3. of Identification of stromal ColXÎą1 and tumor-infiltrating lymphocytes as putative predictive markers of neoadjuvant therapy in estrogen receptor-positive/HER2-positive breast cancer

description: Gene Ontology (GO) gene sets enriched in either good or poor respondingÂ  tumors. The gene sets further examined in this study are highlighted in blue. (XLSX 70 kb)
DOI: 10.6084/m9.figshare.c.3601184_d5.v1
title: MOESM2 of What is the impact of active management on biodiversity in boreal and temperate forests set aside for conservation or restoration? A systematic map

description: Additional file 2. Literature searches.
DOI: 10.6084/m9.figshare.c.3601184_d1.v1
title: MOESM4 of What is the impact of active management on biodiversity in boreal and temperate forests set aside for conservation or restoration? A systematic map

description: Additional file 4. Systematic map database (descriptions of included studies).
DOI: 10.6084/m9.figshare.c.3601184_d3.v1
title: MOESM5 of What is the impact of active management on biodiversity in boreal and temperate forests set aside for conservation or restoration? A systematic map

description: Additional file 5. Articles excluded based on full-text screening.
DOI: 10.6084/m9.figshare.c.3600839_d3.v1
title: MOESM3 of Three-year mortality in 30-day survivors of critical care with acute kidney injury: data from the prospective observational FINNAKI study

description: Additional file 3: Dataset 1. The data the paper conclusions are based on.
DOI: 10.6084/m9.figshare.c.3598946_d1.v1
title: Additional file 4: Table S3. of CTCF-mediated chromatin loops enclose inducible gene regulatory domains

description: Gene Ontology term overrepresentation for genes in different K-means clusters based on occupancy pattern of genes in predicted CTCF loops for the University of Washington (UW) ENCODE cell lines. (XLSX 8869 kb)
DOI: 10.6084/m9.figshare.c.3598448_d14.v1
title: Additional file 15 of Multicopy gene family evolution on primate Y chromosomes

description: RBMY maximum clade credibility tree. Summary of 95 % high posterior density interval information for tree shown in Additional file 1: Figure S4. (TREE 157 KB)
DOI: 10.6084/m9.figshare.c.3597527_d1.v1
title: Additional file 1: of Omalizumab for chronic urticaria in Latin America

description: Database file.Â (SAV 17 kb)
DOI: 10.6084/m9.figshare.c.3596606_d1.v1
title: Additional file 5: Figure S3. of Genotyping-by-sequencing provides the discriminating power to investigate the subspecies of Daucus carota (Apiaceae)

description: Maximum likelihood reconstruction and structure of the genetic diversity of 144 accessions of the Daucus carota complex and outgroups using 43,713 SNPs (30Â % missing imputed genotypes) obtained by GBS. Each accession is represented by a horizontal bar, and each color corresponds to a population (nine in total). Numbers above branches represent bootstrap values, with only values higher than 70Â % shown. Names given to clades refer to the geographic origin and improvement status of the accessions of the D. carota complex. The outgroup taxon is D. syrticus. (PDF 1 MB)
DOI: 10.6084/m9.figshare.c.3596564_d1.v1
title: MOESM4 of To what extent do mesophotic coral ecosystems and shallow reefs share species of conservation interest?

description: Additional file 4. Data extraction templateâ  an annotated data extraction sheet is attached, populated with data from the test library. This example shows the type of data recorded.
DOI: 10.6084/m9.figshare.c.3596606_d9.v1
title: Additional file 4: Figure S2. of Genotyping-by-sequencing provides the discriminating power to investigate the subspecies of Daucus carota (Apiaceae)

description: Phylogenomics of Daucus from a maximum likelihood analysis using 164 accessions and 38,920 SNPs (30Â % missing imputed genotypes) obtained by GBS. Numbers above branches represent bootstrap values, with only values higher than 70Â % shown. Names given to clades refer to the geographic origin and improvement status of the accessions of the D. carota complex. Clades A and B corresponds to the two main groups of the Daucus phylogeny. (PDF 1 MB)
DOI: 10.6084/m9.figshare.c.3595787_d2.v1
title: Additional file 1: of Whole mitochondrial genomes unveil the impact of domestication on goat matrilineal variability

description: Table S1. Sources for the 758 goat control-region sequences. Table S2. Control-region haplotypes and haplogroup classification of the 758 mtDNA sequences from Capra aegagrus (n = 19) and Capra hircus (n = 739). Table S3. Partial coding-region haplotypes and haplogroup classification of two bezoar mtDNAs. Table S4. Source and haplogroup affiliation of the goat complete mtDNA sequences. Figure S1. Nucleotide diversity and total number of substitutions along the entire mtDNA. Figure S2. A putative most parsimonious tree of 84 complete mtDNA sequences from goats. (XLSX 1268 kb)
DOI: 10.6084/m9.figshare.5721484.v1
title: MOESM3 of Ephemeral-habitat colonization and neotropical species richness of Caenorhabditis nematodes

description: Additional file 3. Micro-habitat colonization and age-dependent incidence: Caenorhabditis colonization of orange bait samples distributed at 72 spots along trail system. At each of the 72 spots (Parare, Nouragues Natural Reserve), three baits were distributed (i.e. subsamples, labelled a, b, c) approximately 1 meter apart from each other. See also Additional file 7.
DOI: 10.5523/bris.3e22hupanhca522bibwhfemzp7
title: Data from "Approaching the Quantum Limit of Precision in Absorbance Estimation Using Classical Resources"

description: Data output from experimental work for the publication "Approaching the Quantum Limit of Precision in Absorbance Estimation Using Classical Resources"
DOI: 10.25382/iavi.5727083
title: Table for Prediction of extended high viremia among newly HIV-1-infected persons in sub-Saharan Africa

description: Subject data set for manuscript <b>Prediction of Extended High Viremia
among Newly HIV-1-infected Persons in Sub-Saharan Africa.</b>

<br>
DOI: 10.6084/m9.figshare.5728935.v1
title: Additional file 11 of An integrated meta-analysis approach to identifying medications with potential to alter breast cancer risk through connectivity mapping

description: Significant drugs for Tumor vs Adjacent 4 gene signatures. The list of candidate drugs from connectivity mapping analysis using the 4 Tumor-vs-Adjacent gene signatures. List drugs are significant in at least three out of four input gene signatures. (XLSX 19 kb)
DOI: 10.15468/35mhyt
title: A recent bat survey reveals Bukit Barisan Selatan Landscape as a chiropteran diversity hotspot in Sumatra

description: This dataset contains the digitized treatments in Plazi based on the original journal article Huang, Joe Chun-Chia, Jazdzyk, Elly Lestari, Nusalawo, Meyner, Maryanto, Ibnu, Maharadatunkamsi, Wiantoro, Sigit, Kingston, Tigga (2014): A recent bat survey reveals Bukit Barisan Selatan Landscape as a chiropteran diversity hotspot in Sumatra. Acta Chiropterologica 16 (2): 413-449, DOI: 10.3161/150811014X687369
DOI: 10.17862/cranfield.rd.5594038.v1
title: Dataset for "Effect of UV-C on the physiology and biochemical profile of fresh Piper nigrum berries"

description: This dataset was used in the referenced paper.
DOI: 10.6084/m9.figshare.5758878.v1
title: Additional file 1: of The exploration of contrasting pathways in Triple Negative Breast Cancer (TNBC)

description: FDRs of 191 Yin . 133 Yin pathways were selected with PDF
DOI: 10.6084/m9.figshare.5768610.v1
title: Additional file 2: of An IMD-like pathway mediates both endosymbiont control and host immunity in the cereal weevil Sitophilus spp.

description: imd and relish inhibition by RNAi in S. zeamais (a) and S. oryzae (b). imd and relish expressions were measured by RT-qPCR in bacteriomes and carcasses. Tissues were dissected 6 h following either PBS or TCT injection, 6 days after gfp, imd, or relish dsRNA injection. Gene expression was normalized by the geometric mean of two housekeeping gene expressions, rpl29 and mdh. Raw data (mean ± SD) as well as inhibition percentages are provided. Percentages were calculated as follows: % = 1 − imd RNAi or relish RNAi gfp RNAi × 100 $$ \%=\left(1-\frac{imd\ \mathrm{RNAi}\ \mathrm{or}\ relish\ \mathrm{RNAi}\ }{gfp\ \mathrm{RNAi}\ }\right)\times 100 $$ ; using the mean of five independent measurements for each value. Asterisks indicate a significant difference between a condition and its corresponding gfp RNAi control based on a Welch’s t test (*p
DOI: 10.17637/rh.5772996.v1
title: DATA the heart trumps the head desirability bias in political belief revision

description: The data (and code book -- detailing variable names, responses values, and the meaning of those values) for analyses reported in the article: Tappin, B. M., van der Leer, L. & McKay, R. T. (2017). The
heart trumps the head: Desirability bias in political belief revision. <i>Journal of Experimental Psychology: General.</i>
DOI: 10.17637/rh.5772996.v2
title: DATA - The heart trumps the head: Desirability bias in political belief revision

description: The data (and code book -- detailing variable names, responses values, and the meaning of those values) for analyses reported in the article: Tappin, B. M., van der Leer, L. & McKay, R. T. (2017). The
heart trumps the head: Desirability bias in political belief revision. <i>Journal of Experimental Psychology: General.</i>
DOI: 10.6084/m9.figshare.5788632.v1
title: Additional file 2: of Association between sequence variants in panicle development genes and the number of spikelets per panicle in rice

description: General information for total accessions used in this study. (XLSX 16Â kb)
DOI: 10.1184/r1/5783469.v1
title: Local multi-voxel cortical representations of object semantics. fMRI and Mechanical Turk Data

description: Processed neural data (fMRI), and behavioral data (Mechanical Turk) for the paper: "Local multi-voxel cortical representations of object semantics." by Leeds, Shutov, & Pyles
DOI: 10.5519/qd.1ptqtq27
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (32 records)
DOI: 10.25345/c5nj19
title: MassIVE MSV000085740 - HSP90 identified by a proteomic approach as druggable target to reverse platinum-resistance in ovarian cancer
title: We characterized by an unbiased proteomic approach three isogenic EOC models of Pt-resistance (TOV-112D, OVSAHO and MDAH-2774) by two-dimensional differential in gel electrophoresis (2-D DIGE) followed by Mass Spectrometry (LC-MS/MS).
DOI: 10.17862/cranfield.rd.5245174.v1
title: Intensity plot depicting the relationship between transmission and wavelength for duty cycles between 0 - 100%

description: The folder contains 200 text files where each 10 files is an increase in 5% UV irradiated duty cycle from 5 - 100%. Each text file is arranged into 2 tab delimited columns of wavelength and intensity.This is the raw data associated with our paper 'The effect of UV irradiation duty cycle on the transmission spectra of optical fiber long period gratings'
DOI: 10.5281/zenodo.3944715
title: Replication package for: A Model of Relative Thinking

description: Data replication package for Bushong, Benjamin, Matthew Rabin, and Joshua Schwartzstein, "A Model of Relative Thinking", forthcoming, <em>The </em><em>Review of Economic Studies.</em> Contents: Stata data from two experiments and Stata .do files to replicate analyses.
DOI: 10.25377/sussex.5794386.v1
title: Data for research article: "Visual associative learning in Wood Ants"

description: <b>This data set contains the raw data used in the accepted manuscript "Visual associative learning in wood ants", by the Journal of Experimental Biology.</b><br>In these experiments, wood ants followed a paired or unpaired classical conditioning training that used a visual cue as the conditional stimulus (CS) and sucrose as the unconditional stimulus. These ants were tested either 10 minutes or 1 hour after training. The data set contains the ants' responses to the CS during training and testing, which consist in the Maxilla-Labium Extension Reflex. This is divided in three types of responses, depending on the mouth structures visible and their movement. Responses are noted as 1 if positive and 0 if negative (no response).<br><br><b>Abstract from research paper</b>Wood ants are a model system for studying visual learning and navigation. They can forage for food and navigate to their nests effectively by forming memories of visual features in their surrounding environment. Previous studies of freely behaving ants have revealed many of the behavioural strategies and environmental features necessary for successful navigation. However, little is known about the exact visual properties of the environment that animals learn or the neural mechanisms that allow them to achieve this. As a first step towards addressing this, we developed a classical conditioning paradigm for visual learning in harnessed wood ants that allows us to control precisely the learned visual cues. In this paradigm, ants are fixed and presented with a visual cue paired with an appetitive sugar reward. Using this paradigm, we found that visual cues learnt by wood ants through Pavlovian conditioning are retained for at least one hour. Furthermore, we found that memory retention is dependent upon the ants’ performance during training. Our study provides the first evidence that wood ants can form visual associative memories when restrained. This classical conditioning paradigm has the potential to permit detailed analysis of the dynamics of memory formation and retention, and the neural basis of learning in wood ants.<br>