cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/rnnj49gfmh.1
title:  Morphological and Plant functional traits of seedling of Quercus woods  measured in Molise region (Italy)

description: These  data are referrerd to the seedlings of  three Quercus cerris woods, namely Selva di Castiglione (SC), Bosco della Ficora (BF) and Bosco di San Leo (BSL), developed in different lithological and physiographic conditions and subjected to different forestry practices in Molise region (Italy). The phenotypic parameters considered in this study were the stem and root length and the leaf area, whereas the plant functional traits (PFTs) were specific leaf area (SLA), leaf dry matter content (LDMC), leaf thickness (Lth) and chlorophyll content (CHL).  The measures are reffered to three leaves on each seedling.These numeric data can be analyzed with  basic statistical programs. These data can be compared with data collected in other sites.
DOI: 10.48370/ofd/b6r1qe/geayoh
title: Coraebus rubi 1.JPG

description: :unav
DOI: 10.48370/ofd/b6r1qe
title: Coroebus rubi (Linnaeus, 1767), C-404

description: Coleoptera collection
DOI: 10.17632/wd8gjprjdj.1
title: Dataset on photocatalytic degradation of Levofloxacin using hydroxyapatite photocatalyst: Optimization by response surface methodology

description: Dataset on photocatalytic degradation of Levofloxacin using hydroxyapatite photocatalyst: Optimization by response surface methodology
DOI: 10.17632/vt6sny327k.1
title: Improved Rice Adoption in Northern Ghana

description: The data contain variables use to estimate Welfare Diversification Based on Social Norms in Northern Ghana: Granting Hidden Biases
DOI: 10.48370/ofd/lfrkzx/0wrl4l
title: Piecychna Janusz.pdf

description: :unav
DOI: 10.48370/ofd/lfrkzx
title: Analiza walorów przyrodniczych i poziomu przekształceń środowiska na skutek antropopresji w gminie Czeremcha

description: Promotor: Elżbieta Malzahn
DOI: 10.6084/m9.figshare.19269351.v1
title: Table S1: Impact of igneous intrusion and associated ground deformation on the stratigraphic record

description: Borehole checkshot data used to produce Figure S1
DOI: 10.6084/m9.figshare.19269351
title: Table S1: Impact of igneous intrusion and associated ground deformation on the stratigraphic record

description: Borehole checkshot data used to produce Figure S1
DOI: 10.17632/d9vn7ygf3z.3
title: Data pertaining to aberrant intracellular calcium handling during androgen deprivation therapy in prostate cancer 

description: The data generated here in relates to the research article “CaV1.3 enhanced store operated calcium promotes resistance to androgen deprivation in prostate cancer”. Our hypothesis was that CaV1.3 contributed to altered calcium during androgen deprivation therapy (ADT) in prostate cancer, leading to castrate resistance disease. Here a model of prostate cancer (PCa) progression to castration resistance was employed, with untreated androgen sensitive LNCaP cell line alongside two androgens deprived (bicalutamide) sublines, either 10 days (LNCaP-ADT) or 2 years (LNCaP-ABL) treatment. Within which using qPCR we examined fold change gene expression of markers linked to androgen resistance, androgen receptor (AR) and neuron specific enolase (NSE), observing an increase under ADT. In addition, the gene expression of a range of calcium channels was measured, with the L-type Voltage gated calcium channel, CaV1.3, demonstrating the largest increase during ADT compared to DMSO control. The effect of CaV1.3 on the gene expression of calcium channels Orai and STIM1 was tested using CaV1.3 siRNA knockdown, with no effect observed. Protein fractionation and subsequent CaV1.3 western blot noted the presence of CaV1.3 c-terminus in the nucleus which was lost in LNCaP-ABL. The calcium channel blocker (CCB), nifedipine, was employed to determine the impact of CaV1.3 on store release and calcium entry measured with Fura-2AM ratiometric dye. In both the presence and absence ADT, nifedipine was found to have no impact on store release induced by thapsigargin (Tg) in 0mM Ca2+ nor calcium entry following the addition of 2mM Ca2. However, CaV1.3 siRNA knockdown was able to reduce SOCE in PC3 cells. The effect of nifedipine on CaV1.3 in PCa biology was measured through cell survival colony formation assay, with no observed change in the presence of CCB. While siCaV1.3 reduced PC3 cell proliferation. This data can be reused to inform new studies investigating altered calcium handling in androgen resistant prostate cancer. It provides insight into the mechanism of CaV1.3 and its functional properties in altered calcium in cancer, which can be of use to researchers investigating this channel in disease. Furthermore, it could be helpful in interpretting studies investigating CCB’s as a therapeutic and also in the development of future drugs targeting CaV1.3.
DOI: 10.5281/zenodo.6319979
title: A database of physical therapy exercises with variability of execution collected by wearable sensors

description: The PHYTMO database contains data from physical therapy exercises and gait variations recorded with magneto-inertial sensors, including information from an optical reference system. PHYTMO includes the recording of 30 volunteers, aged between 20 and 70 years old. A total amount of 6 exercises and 3 gait variations commonly prescribed in physical therapies were recorded. The volunteers performed two series with a minimum of 8 repetitions in each one. Four magneto-inertial sensors were placed on the lower-or upper-limbs for the recording of the motions together with passive optical reflectors. The files include the specifications of the inertial sensors and the cameras. The database includes magneto-inertial data (linear acceleration, turn rate and magnetic field), together with a highly accurate location and orientation in the 3D space provided by the optical system (errors are lower than 1mm). The database files were stored in CSV format to ensure usability with common data processing software. The main aim of this dataset is the availability of inertial data for two main purposes: the analysis of different techniques for the identification and evaluation of exercises monitored with inertial wearable sensors and the validation of inertial sensor-based algorithms for human motion monitoring that obtains segments orientation in the 3D space. Furthermore, the database stores enough data to train and evaluate Machine Learning-based algorithms. The age range of the participants can be useful for establishing age-based metrics for the exercises evaluation or the study of differences in motions between different aged groups. Finally, the MATLAB function <em>features_extraction</em>, developed by the authors, is also given. This function splits signals using a sliding window, returning its segments, and extract signal features, in the time and frequency domains, based on prior studies of the literature.
description: V0 consists of the magneto-inertial data with the reference from the optical system and the features_extraction function. V0.1 includes the data of V0 and the datasheet of the magneto-inertial sensors and the cameras.
DOI: 10.5281/zenodo.5052755
title: A database of physical therapy exercises with variability of execution collected by wearable sensors

description: The PHYTMO database contains data from physical therapy exercises and gait variations recorded with magneto-inertial sensors, including information from an optical reference system. PHYTMO includes the recording of 30 volunteers, aged between 20 and 70 years old. A total amount of 6 exercises and 3 gait variations commonly prescribed in physical therapies were recorded. The volunteers performed two series with a minimum of 8 repetitions in each one. Four magneto-inertial sensors were placed on the lower-or upper-limbs for the recording of the motions together with passive optical reflectors. The files include the specifications of the inertial sensors and the cameras. The database includes magneto-inertial data (linear acceleration, turn rate and magnetic field), together with a highly accurate location and orientation in the 3D space provided by the optical system (errors are lower than 1mm). The database files were stored in CSV format to ensure usability with common data processing software. The main aim of this dataset is the availability of inertial data for two main purposes: the analysis of different techniques for the identification and evaluation of exercises monitored with inertial wearable sensors and the validation of inertial sensor-based algorithms for human motion monitoring that obtains segments orientation in the 3D space. Furthermore, the database stores enough data to train and evaluate Machine Learning-based algorithms. The age range of the participants can be useful for establishing age-based metrics for the exercises evaluation or the study of differences in motions between different aged groups. Finally, the MATLAB function <em>features_extraction</em>, developed by the authors, is also given. This function splits signals using a sliding window, returning its segments, and extract signal features, in the time and frequency domains, based on prior studies of the literature.
description: V0 consists of the magneto-inertial data with the reference from the optical system and the features_extraction function. V0.1 includes the data of V0 and the datasheet of the magneto-inertial sensors and the cameras.
DOI: 10.17632/hrrv2gxbbx.1
title: Supplement: Lean body mass in boys with Prader-Willi syndrome increases normally during spontaneous and induced puberty

description: We were interested in the average effect of time and fat mass index (FMI) on lean mass index (LMI) in boys with Prader-Willi syndrome (PWS) in the pre-pubertal and pubertal phase. For statistical analysis, we chose two-level linear mixed models (LMMs). We separated the time around puberty into two periods and calculated respective models: one for the pre-pubertal period and one for the pubertal period. Time was centred to the onset of puberty. The models were estimated using the restricted maximum likelihood method and nloptwrap optimiser. LMI for both periods showed a moderate skewness (≤0.85) and FMI was highly skewed (≥0.97). Before the inclusion of FMI values into the models, we reduced the skewness by using a log10 transformation.
In our first approach, we fitted the models to predict LMI with time only as a fixed effect and time and subject as random effects (Model A formula: LMI ~ time + (time | subject)). 
As a second approach, FMI_log10 was added as a fixed effect to test whether it influences LMI (Model B formula: LMI ~ time + FMI_log10 + (time | subject)). Model fit of the models A and B were then compared using the Likelihood Ratio Test and 95% CI and p-values were computed using the Wald approximation. 

This supplement shows the Q-Q-plots and histograms of the residuals of both A models. The Likelihood Ratio Test showed that B models were no better than A models.
DOI: 10.48370/ofd/wbewai
title: Hymenochaete tabacina (Sowerby) Lév., 2298

description: Fungarium Macromycetes
DOI: 10.17632/cpgf3c5dtx.1
title: Faster Than Real Time (FTRT) tsunami simulations for the Spanish Tsunami Warning System for the Atlantic. Live Demo ChEESE.

description: Data results from the live demo performed within the framework of the ChEESE project (www.cheese-coe.eu) and in coordination with the Spanish National Geographic Institute (IGN) which consisted in the simulations of 135 scenarios for tsunamis generated by earthquake in the Gulf of Cadiz with impact in the Western Iberian Peninsula and the Canary Islands. 
These data were obtained using Tsunami-HySEA (https://edanya.uma.es/hysea/index.php/models/tsunami-hysea) and the numerical simulations were carried out using High Performance Computing resources from CINECA (https://www.hpc.cineca.it).
Data description:
- list_of_events.txt contains the list of the 135 selected scenarios to be simulated based on the variability of some of the Okada parameters that define the earthquake.
- bathymetry folder contains .GRD files used as input bathymetry (4 different domains and 3 different resolutions)
- simulations_* folders contain the NETCDF output files resulting from the 135 simulations for each computational domain. These *_ts.nc files store the maximum height for each point of interest and for each simulated event. And also, wave height at each forecast point  (FCPs) is calculated, saving data every 15 seconds and during the simulation time (4 hours). 
- TS folder contains the longitud and latitude coordinates of each FCP and for each resolution domain labeled by target areas defined by IGN.
DOI: 10.17632/83cg3jbmsh.1
title: Kass 2022 JDS

description: Appendix 1
DOI: 10.17632/3tprt2ct2n.2
title: Data for Modeling Large-scale Coal-Fired CHP Plant in Kazakhstan: Two Cases

description: This data article provides information on input data to represent the operational processes of two combined heat and power plants (CHPP) in Kazakhstan. The presented data in this article are related to the research article “Efficient planning of energy production and maintenance of large-scale combined heat and power plants” (G. Kopanos et al. 2018). This set of data is helpful in modelling two different cases of the Industrial coal-fired power plants installed in the Soviet Union period during 1970-1990 years.
DOI: 10.17632/x5fyb55w9x.1
title: De novo generation of the NPM-ALK fusion recapitulates the pleiotropic phenotypes of ALK+ ALCL pathogenesis and reveals the ROR2 receptor as target for tumor cells

description: ABSTRACT

Anaplastic large cell lymphoma positive for ALK (ALK+ ALCL) is a rare type of non-Hodgkin lymphoma. This lymphoma is caused by chromosomal translocations involving the anaplastic lymphoma kinase gene (ALK). In this study, we aimed to identify mechanisms of transformation and therapeutic targets by generating a model of ALK+ ALCL lymphomagenesis ab initio with the specific NPM-ALK fusion.
Methods:
We performed CRISPR/Cas9-mediated genome editing of the NPM-ALK chromosomal translocation in primary human activated T lymphocytes.
Results:
Both CD4+ and CD8+ NPM-ALK-edited T lymphocytes showed rapid and reproducible competitive advantage in culture and led to in vivo disease development with nodal and extra-nodal features. Murine tumors displayed the phenotypic diversity observed in ALK+ ALCL patients, including CD4+ and CD8+ lymphomas. Assessment of transcriptome data from models and patients revealed global activation of
the WNT signaling pathway, including both canonical and non-canonical pathways, during ALK+ ALCL lymphomagenesis. Specifically, we found that the WNT signaling cell surface receptor ROR2 represented a robust and genuine marker of all ALK+ ALCL patient tumor samples.
Conclusions:
In this study, ab initio modeling of the ALK+ ALCL chromosomal translocation in mature T lymphocytes enabled the identification of new therapeutic targets. As ROR2 targeting approaches for other cancers are under development (including lung and ovarian tumors), our findings suggest that ALK+ ALCL cases with resistance to current therapies may also benefit from ROR2 targeting strategies.
DOI: 10.17632/mmg7jz5587.2
title: Data for Encapsulated actomyosin patterns drive cell-like membrane shape changes

description: Data for Encapsulated actomyosin patterns drive cell-like membrane shape changes
DOI: 10.17632/t726dmtx24.1
title: Results of cross-lingual text reuse detection among European Universities

description: The dataset with results of the experiment for the article "Cross-language plagiarism detection: a case study of European languages academic works".

The dataset contains analyzed documents from OATD (only those, allowed by the document license), sources of the documents (only from open sources), and reports.

Each report in json format contains the URLs of the documents, offsets, and lengths of each detected case and the first and last tokens of found case.
DOI: 10.48370/ofd/g62iyr/y3z1ko
title: Woźnialis Marcin.pdf

description: :unav
DOI: 10.48370/ofd/g62iyr
title: Analiza form ochrony przyrody w Nadleśnictwie Ełk

description: Promotor: Łukasz Skalski
DOI: 10.17632/d9r96x4c9x.3
title: Motional clustering in supra-τc conformational exchange influences NOE cross-relaxation rate

description: This data repository contains correlation functions, ITS and tICA plots as well as NOESY build-up curves for all local systems in all force fields that are in supra-τc exchange (up to 10 A distance). In addition, all other methyl--methyl contacts of up to 5 A are also provided. It can be visualized with the dashboard provided in the following GitHub repository: https://github.com/chrisdkolloff/calcnoesy-supplement-dashboard.
DOI: 10.17632/9s47d549c5.1
title: Progression In Patients Without Acceleration

description: Percentage of patients without acceleration who developed disease progression
DOI: 10.17632/tmwyx8c6f2.2
title: Supplementary Figure 1.

description: Rate of progression in MF patients with a variable number of consecutive years without acceleration starting from presentation.
DOI: 10.5281/zenodo.6308119
title: Oral cancer speech corpus for paper "Detecting and analysing spontaneous oral cancer speech in the wild"

description: This is the oral cancer speech corpus used in the paper <em>"Detecting and analysing spontaneous oral cancer speech in the wild".</em> <strong>Description</strong> This dataset contains approximately 3 hours of oral cancer speech data collected from YouTube, including a file with additional metadata. We use this dataset to perform an oral cancer speech detection task in our paper. <strong>Funding</strong> This project has received funding from the European Union’s Horizon 2020 research and innovation programme under Marie Sklodowska-Curie grant agreement No 766287. The Department of Head and Neck Oncology and surgery of the Netherlands Cancer Institute receives a research grant from Atos Medical (Horby, Sweden),<br> which contributes to the existing infrastructure for quality of life research. <strong>Citation:</strong> If you use this dataset please cite: <pre><code>@misc{halpern2020detecting, title={Detecting and analysing spontaneous oral cancer speech in the wild}, author={Bence Mark Halpern and Rob van Son and Michiel van den Brekel and Odette Scharenborg}, year={2020}, eprint={2007.14205}, archivePrefix={arXiv}, primaryClass={eess.AS} }</code></pre>
DOI: 10.5281/zenodo.3732321
title: Oral cancer speech corpus for paper "Detecting and analysing spontaneous oral cancer speech in the wild"

description: This is the oral cancer speech corpus used in the paper <em>"Detecting and analysing spontaneous oral cancer speech in the wild".</em> <strong>Description</strong> This dataset contains approximately 3 hours of oral cancer speech data collected from YouTube, including a file with additional metadata. We use this dataset to perform an oral cancer speech detection task in our paper. <strong>Funding</strong> This project has received funding from the European Union’s Horizon 2020 research and innovation programme under Marie Sklodowska-Curie grant agreement No 766287. The Department of Head and Neck Oncology and surgery of the Netherlands Cancer Institute receives a research grant from Atos Medical (Horby, Sweden),<br> which contributes to the existing infrastructure for quality of life research. <strong>Citation:</strong> If you use this dataset please cite: <pre><code>@misc{halpern2020detecting, title={Detecting and analysing spontaneous oral cancer speech in the wild}, author={Bence Mark Halpern and Rob van Son and Michiel van den Brekel and Odette Scharenborg}, year={2020}, eprint={2007.14205}, archivePrefix={arXiv}, primaryClass={eess.AS} }</code></pre>
DOI: 10.17632/3p743v3tfn.2
title: Local Climate Zone (LCZ) map of the São Paulo Metropolitan Region - 2017

description: Title
LCZ map of the São Paulo Metropolitan Region – 2017

Data Description
This map is part of a PhD research entitled “Vegetation, surface temperature and urban morphology. A portrait of the São Paulo Metropolitan Region”.
The data consists of a shapefile of the São Paulo Metropolitan Region LCZ map of 2017 at 100m and 250mspatial resolution, a QGIS layer setting (.qml) for official color settings and JPG images. The LCZ classification used Landsat scenes and the Local Climate Zone Classification tool available at SAGA GIS version 2.2.0. We used Landsat 8-OLI scenes path 219 row 76 and 77 from 26th July and 15th November 2017.
Projection: EPSG 31983 – Sirgas 2000/ UTM zone 23S.
For more information about the method please refer to: 
FERREIRA, L. S. (2019). Vegetação, temperatura de superfície e morfologia urbana: um retrato da região metropolitana de São Paulo. Available at: https://teses.usp.br/teses/disponiveis/16/16132/tde-02102019-173844/pt-br.php
Classes are represented by numbers as follows:
LCZ 1 (DN 1) - Compact highrise
LCZ 2 (DN 2) - Compact midrise
LCZ 3 (DN 3) - Compact lowrise		
LCZ 4 (DN 4) - Open highrise		
LCZ 5 (DN 5) - Open midrise		
LCZ 6 (DN 6) - Open lowrise		
LCZ 8 (DN 8) - Large lowrise		
LCZ 9 (DN 9) - Sparsely built		
LCZ A (DN 101) - Dense trees		
LCZ B (DN 102) - Scattered trees		
LCZ C (DN 103) - Bush, scrub		
LCZ D (DN 104) - Low plants		
LCZ E (DN 105) - Bare rock or paved	
LCZ F (DN 106) - Bare soil or sand
LCZ G (DN 107) – Water

LCZ 7 - Lightweight low-rise and LCZ 10 - Heavy Industry	were not used due to the lack of significand areas of these categories.

Acknowledgement
This research was supported by the São Paulo Research Foundation – FAPESP (Grants #2015/17360-341 5 and #2016/02825-5) and by the National Council for Scientific and Technological Development – 342 CNPq (Productivity Grant 309669/2015-4).
DOI: 10.17632/48vfvn7v3k.2
title: Local Climate Zone (LCZ) map of the São Paulo Metropolitan Region - 2010

description: Title
Local Climate Zone (LCZ) map of the São Paulo Metropolitan Region – 2010
Data Description
This map is part of a PhD research entitled “Vegetation, surface temperature and urban morphology. A portrait of the São Paulo Metropolitan Region”.
The data consists of a shapefile of the São Paulo Metropolitan Region LCZ map of 2010 at 100m and 250m spatial resolution, a QGIS layer setting (.qml) for official color settings and JPG images.
The LCZ classification used Landsat scenes and the Local Climate Zone Classification tool available at SAGA GIS version 2.2.0. We used Landsat 5-TM scenes path 219 row 76 and 77 from 18th April and 5th May 2010.
Projection: EPSG 31983 – Sirgas 2000/ UTM zone 23S.
For more information about the method please refer to: 
FERREIRA, L. S. (2019). Vegetação, temperatura de superfície e morfologia urbana: um retrato da região metropolitana de São Paulo. Available at: https://teses.usp.br/teses/disponiveis/16/16132/tde-02102019-173844/pt-br.php
Classes are represented by numbers as follows:
LCZ 1 (DN 1) - Compact highrise
LCZ 2 (DN 2) - Compact midrise
LCZ 3 (DN 3) - Compact lowrise		
LCZ 4 (DN 4) - Open highrise		
LCZ 5 (DN 5) - Open midrise		
LCZ 6 (DN 6) - Open lowrise		
LCZ 8 (DN 8) - Large lowrise		
LCZ 9 (DN 9) - Sparsely built		
LCZ A (DN 101) - Dense trees		
LCZ B (DN 102) - Scattered trees		
LCZ C (DN 103) - Bush, scrub		
LCZ D (DN 104) - Low plants		
LCZ E (DN 105) - Bare rock or paved	
LCZ F (DN 106) - Bare soil or sand
LCZ G (DN 107) – Water

LCZ 7 - Lightweight low-rise and LCZ 10 - Heavy Industry	were not used due to the lack of significand areas of these categories.
Acknowledgement
This research was supported by the São Paulo Research Foundation – FAPESP (Grants #2015/17360-341 5 and #2016/02825-5) and by the National Council for Scientific and Technological Development – 342 CNPq (Productivity Grant 309669/2015-4).