cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.qwzxhn
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Taraxacum canum Soest"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005650-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.161637
title: DENDARA - TEMPLE - Vol.III, pl. CCXXXII._pv_2004_00305

description: Référence : pv_2004_00305<br />Site : Dendara<br />Secteur : Chambre sud-ouest (M); Temple d'Hathor<br />Type : photographie<br />
DOI: 10.15468/dl.v9f82j
title: Occurrence Download

description: A dataset containing 581 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Harpalus signaticornis (Duftschmid, 1812))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 581 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0241964-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.161638
title: DENDARA - TEMPLE - Vol.III, pl. CCXXXII._pv_2004_00302

description: Référence : pv_2004_00302<br />Site : Dendara<br />Secteur : Chambre sud-ouest (M); Temple d'Hathor<br />Type : photographie<br />
DOI: 10.15468/dl.tknx0y
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OrganismId is http://arctos.database.museum/guid/MLZ:Bird:4681",
 "DatasetKey is MLZ Bird Collection (Arctos)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0043923-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u6h2sc
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendrobium rennellii P.J.Cribb"
 ]
}

 The dataset includes 21 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020116-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.57s4mg
title: Occurrence Download

description: A dataset listing the 15869 species recorded in GBIF matching the query:
{
 "Country" : [
 "is Senegal"
 ]
}

 The dataset's 15869 records were derived from 660 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0386357-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13716420
title: Planilha de Análise Pontas Líticas do Município de Piracicaba (Estado de São Paulo)
DOI: 10.5281/zenodo.13716421
title: Planilha de Análise Pontas Líticas do Município de Piracicaba (Estado de São Paulo)
DOI: 10.15468/dl.hcvmzr
title: Occurrence Download

description: A dataset containing 254 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation)",
 "Country is United States of America",
 "Geometry POLYGON((-118.94873 33.64089,-118.13848 33.56901,-117.6901 33.64089,-117.50853 34.45336,-117.6901 34.80564,-117.88974 35.12483,-118.32709 35.07984,-119.02446 35.05217,-118.94873 34.80564,-119.1458 34.32074,-118.94873 33.64089))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Orchidaceae",
 "Year 2014-2024"
 ]
}

 The dataset includes 254 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000412-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z7m2mh
title: Occurrence Download

description: A dataset containing 537 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Andinobates bombetes (Myers & Daly, 1980)"
 ]
}

 The dataset includes 537 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000413-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13716389
title: EBEC-MicroED: Static electron diffraction movies collected at different incident flux on a direct electron detector (DE Apollo) on crystals of (S,S) Jacobsen's salen ligand and Co(II) porphyrin, and diffraction tilt series recorded on the DE Apollo and CetaD detector for the same crystals of Jacobsen's Ligand

description: This record contains static diffraction movies recorded from crystals of (S,S) Jacobsen's salen ligand, and crystals of Co(II) meso-tetraphenyl porphyrin, using a direct electron detector (DE Apollo) in counting mode. Data were acquired at varying different incident flux settings, referred to as "spotsize11" or "spot11" (0.01 electrons per square Angstoms per second),  "spotsize10" or "spot10" (0.03 electrons per square Angstrom per second),  "spotsize9" or "spot9" (0.045 electrons per square angstrom per second)", and "spotsize8" or "spot8" (0.084 electrons per sqaure Angstrom per second. For each compound these trials, the same crystal ("crystal1", "crystal2", etc.) was conserved across a dose series, and illuminated at each incident flux from lowest to highest in sequence.

Additionally, this record contains diffraction tilt series acquired from crystals of (S,S) Jacobsen's ligand, first on the Ceta D and next on the DE Apollo, rotating at 2 degrees per second with an incident flux of either 0.01 or 0.045 electrons per square Angstrom per second.

All data is saved in mrc file format, with the exception of movies from the Ceta D, which are saved in ser file format.
DOI: 10.5281/zenodo.13716390
title: EBEC-MicroED: Static electron diffraction movies collected at different incident flux on a direct electron detector (DE Apollo) on crystals of (S,S) Jacobsen's salen ligand and Co(II) porphyrin, and diffraction tilt series recorded on the DE Apollo and CetaD detector for the same crystals of Jacobsen's Ligand

description: This record contains static diffraction movies recorded from crystals of (S,S) Jacobsen's salen ligand, and crystals of Co(II) meso-tetraphenyl porphyrin, using a direct electron detector (DE Apollo) in counting mode. Data were acquired at varying different incident flux settings, referred to as "spotsize11" or "spot11" (0.01 electrons per square Angstoms per second),  "spotsize10" or "spot10" (0.03 electrons per square Angstrom per second),  "spotsize9" or "spot9" (0.045 electrons per square angstrom per second)", and "spotsize8" or "spot8" (0.084 electrons per sqaure Angstrom per second. For each compound these trials, the same crystal ("crystal1", "crystal2", etc.) was conserved across a dose series, and illuminated at each incident flux from lowest to highest in sequence.

Additionally, this record contains diffraction tilt series acquired from crystals of (S,S) Jacobsen's ligand, first on the Ceta D and next on the DE Apollo, rotating at 2 degrees per second with an incident flux of either 0.01 or 0.045 electrons per square Angstrom per second.

All data is saved in mrc file format, with the exception of movies from the Ceta D, which are saved in ser file format.
DOI: 10.25810/t8k0-v387
title: Fission Yeast Live Cell Imaging and Quantification Datasets

description: This dataset contains spinning-disk confocal microscopy Nikon (.nd2) files of live cell fission yeast from the 2024 Current Biology paper "Kinesin-5/Cut7 C-terminal tail phosphorylation is essential for microtubule sliding force and bipolar mitotic spindle assembly."  The .nd2 datasets are also saved a maximum intensity projections which have been annotated with a number or letter for statistical analysis.  The data also contains kymographs and spindle length dynamics analysis for all of the genotypes shown in the published paper as well as Matlab generated statistical analysis files.  Finally, it contains data used for the statistical model of protrusions described in the paper.
DOI: 10.5281/zenodo.13716076
title: EBEC-MicroED: Electron diffraction tilt series recorded on crystals of thiostrepton at 100 K using a direct electron detector (DE Apollo)

description: This record contains diffraction tilt series recorded from crystals of thiostrepton using a direct electron detector (DE Apollo) in counting mode. Incident flux and stage rotation rate are varied, for a total of three data collection settings giving variable total electron beam fluence. The keywords "fast" and "slow" in the titles of the dataset file indicates that the stage was rotated at either 2 degrees/second, or 0.33 degrees/second, respectively. Data were additionally acquired at two different incident flu settings, referred to as "spotsize11" or "spot11" (0.01 electrons per square Angstoms per second) and "spotsize9" or "spot9" (0.045 electrons per square angstrom per second)"

The keyword "clfix" in certain file names indicates that these datasets are versions of the correspondingly named dataset file with an adjustment to pixel values to correct for coincidence loss applied to the frames.

All data is saved in mrc file format.
DOI: 10.5281/zenodo.13716077
title: EBEC-MicroED: Electron diffraction tilt series recorded on crystals of thiostrepton at 100 K using a direct electron detector (DE Apollo)

description: This record contains diffraction tilt series recorded from crystals of thiostrepton using a direct electron detector (DE Apollo) in counting mode. Incident flux and stage rotation rate are varied, for a total of three data collection settings giving variable total electron beam fluence. The keywords "fast" and "slow" in the titles of the dataset file indicates that the stage was rotated at either 2 degrees/second, or 0.33 degrees/second, respectively. Data were additionally acquired at two different incident flu settings, referred to as "spotsize11" or "spot11" (0.01 electrons per square Angstoms per second) and "spotsize9" or "spot9" (0.045 electrons per square angstrom per second)"

The keyword "clfix" in certain file names indicates that these datasets are versions of the correspondingly named dataset file with an adjustment to pixel values to correct for coincidence loss applied to the frames.

All data is saved in mrc file format.
DOI: 10.15468/dl.6fdn9p
title: Occurrence Download

description: A dataset containing 134 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-78.56153 -7.94313,-79.55383 -8.56587,-76.45591 -14.02244,-73.74522 -12.58574,-76.18968 -6.76698,-78.56153 -7.94313))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Tachyphonus rufus (Boddaert, 1783)"
 ]
}

 The dataset includes 134 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000414-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26961949
title: MATRIZ - violencia de género en mujeres

description: Revisión sistemática sobre las causas y las consecuencias de la violencia de género.
DOI: 10.26078/rbc1-da28
title: High Sugar Diet Alters Immune Function and the Gut Microbiome in Juvenile Green Iguanas (Iguana Iguana)

description: The present work aimed to study whether a high sugar diet can alter immune responses and the gut microbiome in green iguanas. Thirty-six iguanas were split into four treatment groups using a 2×2 design. Iguanas received either a sugar-supplemented diet or a control diet, and either a lipopolysaccharide (LPS) injection or a phosphate-buffered saline (PBS) injection. Iguanas were given their respective diet treatment through the entire study (∼3 months) and received a primary immune challenge 1 and 2 months into the experiment. Blood samples and cloacal swabs were taken at various points in the experiment and used to measure changes in the immune system (bacterial killing ability, lysis and agglutination scores, LPS-specific IgY concentrations), and alterations in the gut microbiome. We found that a sugar diet reduces bacterial killing ability following an LPS challenge, and sugar and the immune challenge temporarily alters gut microbiome composition while reducing alpha diversity. Although sugar did not directly reduce lysis and agglutination following the immune challenge, the change in these scores over a 24-h period following an immune challenge was more drastic (it decreased) relative to the control diet group. Moreover, sugar increased constitutive agglutination outside of the immune challenges (i.e. pre-challenge levels). In this study, we provide evidence that a high sugar diet affects the immune system of green iguanas (in a disruptive manner) and alters the gut microbiome.
DOI: 10.15468/dl.whtnux
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "Continent is South America",
 "Country is Colombia",
 "DatasetKey is one of (Colección de Reptiles - Museo de Herpetología de la Universidad de Antioquia, iNaturalist Research-grade Observations, Colección de Reptiles del Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH-R), Colección de Tejidos del Instituto de Investigación de Recursos Biológicos Alexander von Humboldt (IAvH-CT))",
 "IucnRedListCategory is NT",
 "PublishingOrg is one of (cccff716-2694-4209-9f9e-2f7a484465a0, 28eb1a3f-1c15-4a95-931a-4af90ecb574d, 2a7e3080-28a9-11dd-97cd-b8a03c50a862)",
 "TaxonKey is Anolis antioquiae Williams, 1985"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000415-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13712865
title: A Test Dataset for Open Chrono-Morph Viewer (OCMV)

description: Open Chrono-Morph Viewer (OCMV) is an open-source image visualization and animation platform handling volumetric time series, especially those containing unequally sampled volumes, such as those produced by 4D (3D+time) cardiac alignment. OCMV is available at https://github.com/ShangWangLab/OpenChronoMorphViewer. This dataset is for demonstrating OCMV’s unique timeline features. It shows the dynamics of the embryonic mouse heart around embryonic day 8.5, consisting of 150 NRRD volumes spanning two timescales. The fast timescale represents the heartbeat phase over the complete cardiac cycle, while the slow timescale represents the development at three timepoints spanning two hours. Across the three developmental timepoints, the number of volumes sampling the heartbeat changes, as does the volume size (number of voxels). The data have two channels: the first channel represents the tissue structure, and the second channel represents the blood flow velocity component along the vertical axis spanning ±9.8 mm/s. The acquisition and processing of this dataset followed the methods described in https://doi.org/10.1364/BOE.475027. All animal manipulations were approved by the Institutional Animal Care and Use Committee at Baylor College of Medicine, and the experiments followed the approved procedures and guidelines.

Acknowledgement: We thank Dr. Irina V. Larina (Baylor College of Medicine) for her support with the experiment.
DOI: 10.5281/zenodo.13712866
title: A Test Dataset for Open Chrono-Morph Viewer (OCMV)

description: Open Chrono-Morph Viewer (OCMV) is an open-source image visualization and animation platform handling volumetric time series, especially those containing unequally sampled volumes, such as those produced by 4D (3D+time) cardiac alignment. OCMV is available at https://github.com/ShangWangLab/OpenChronoMorphViewer. This dataset is for demonstrating OCMV’s unique timeline features. It shows the dynamics of the embryonic mouse heart around embryonic day 8.5, consisting of 150 NRRD volumes spanning two timescales. The fast timescale represents the heartbeat phase over the complete cardiac cycle, while the slow timescale represents the development at three timepoints spanning two hours. Across the three developmental timepoints, the number of volumes sampling the heartbeat changes, as does the volume size (number of voxels). The data have two channels: the first channel represents the tissue structure, and the second channel represents the blood flow velocity component along the vertical axis spanning ±9.8 mm/s. The acquisition and processing of this dataset followed the methods described in https://doi.org/10.1364/BOE.475027. All animal manipulations were approved by the Institutional Animal Care and Use Committee at Baylor College of Medicine, and the experiments followed the approved procedures and guidelines.

Acknowledgement: We thank Dr. Irina V. Larina (Baylor College of Medicine) for her support with the experiment.
DOI: 10.5517/ccdc.csd.cc2hp3y8
title: CCDC 2314210: Experimental Crystal Structure Determination

description: Related Article: Francisco Rubio-Sepúlveda, Sofía Huechucura, Carlos Cruz, Abdul M. Reyes, Sebastian E. Reyes-Lillo, Javier Campo, Diego Venegas-Yazigi, Verónica Paredes-García|2024|Cryst.Growth Des.|24|7002|doi:10.1021/acs.cgd.4c00642
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hp3z9
title: CCDC 2314211: Experimental Crystal Structure Determination

description: Related Article: Francisco Rubio-Sepúlveda, Sofía Huechucura, Carlos Cruz, Abdul M. Reyes, Sebastian E. Reyes-Lillo, Javier Campo, Diego Venegas-Yazigi, Verónica Paredes-García|2024|Cryst.Growth Des.|24|7002|doi:10.1021/acs.cgd.4c00642
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hp40c
title: CCDC 2314212: Experimental Crystal Structure Determination

description: Related Article: Francisco Rubio-Sepúlveda, Sofía Huechucura, Carlos Cruz, Abdul M. Reyes, Sebastian E. Reyes-Lillo, Javier Campo, Diego Venegas-Yazigi, Verónica Paredes-García|2024|Cryst.Growth Des.|24|7002|doi:10.1021/acs.cgd.4c00642
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hp41d
title: CCDC 2314213: Experimental Crystal Structure Determination

description: Related Article: Francisco Rubio-Sepúlveda, Sofía Huechucura, Carlos Cruz, Abdul M. Reyes, Sebastian E. Reyes-Lillo, Javier Campo, Diego Venegas-Yazigi, Verónica Paredes-García|2024|Cryst.Growth Des.|24|7002|doi:10.1021/acs.cgd.4c00642
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hp42f
title: CCDC 2314214: Experimental Crystal Structure Determination

description: Related Article: Francisco Rubio-Sepúlveda, Sofía Huechucura, Carlos Cruz, Abdul M. Reyes, Sebastian E. Reyes-Lillo, Javier Campo, Diego Venegas-Yazigi, Verónica Paredes-García|2024|Cryst.Growth Des.|24|7002|doi:10.1021/acs.cgd.4c00642
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hp43g
title: CCDC 2314215: Experimental Crystal Structure Determination

description: Related Article: Francisco Rubio-Sepúlveda, Sofía Huechucura, Carlos Cruz, Abdul M. Reyes, Sebastian E. Reyes-Lillo, Javier Campo, Diego Venegas-Yazigi, Verónica Paredes-García|2024|Cryst.Growth Des.|24|7002|doi:10.1021/acs.cgd.4c00642
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hp45j
title: CCDC 2314217: Experimental Crystal Structure Determination

description: Related Article: Francisco Rubio-Sepúlveda, Sofía Huechucura, Carlos Cruz, Abdul M. Reyes, Sebastian E. Reyes-Lillo, Javier Campo, Diego Venegas-Yazigi, Verónica Paredes-García|2024|Cryst.Growth Des.|24|7002|doi:10.1021/acs.cgd.4c00642
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.