cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.qhpgy8
title: Occurrence Download

description: A dataset containing 467 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Specimen, Fossil)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Alopiidae"
 ]
}

 The dataset includes 467 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0256985-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dszju6
title: Occurrence Download

description: A dataset containing 418 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arthropoda",
 "DatasetKey is Inventaires et suivis sites compensation contournement sur la commune de DAX-Données opportunistes",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((-25.03991 31.75, 41.65954 31.75, 41.65954 71.53037, -25.03991 71.53037, -25.03991 31.75))"
 ]
}

 The dataset includes 418 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0217708-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.43e673
title: Occurrence Download

description: A dataset containing 2169061 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Prunus dulcis (Mill.) D.A.Webb, Malus domestica (Suckow) Borkh., Hordeum vulgare L., Lupinus angustifolius L., Borago officinalis L., Brassica oleracea L., Vicia faba L., Camelina sativa (L.) Crantz, Manihot esculenta Crantz, Agave americana L., Salvia hispanica L., Gossypium hirsutum L., Triticum turgidum subsp. durum (Desf.) Husn., Triticum turgidum subsp. dicoccum (Schrank ex Schübl.) Thell., Eucalyptus camaldulensis Dehn., Eucalyptus nitens (H.Deane & Maiden) Maiden, Eucalyptus gunnii Hook.fil., Pisum sativum L., Linum usitatissimum L., Vitis vinifera L., Arachis hypogaea L., Cannabis sativa L., Jatropha curcas L., Lens culinaris Medik., Lepidium meyenii Walp., Zea mays L., Panicum miliaceum L., Miscanthus sinensis Andersson, Miscanthus sacchariflorus (Maxim.) Benth., 1887, Nigella sativa L., Avena sativa L., Elaeis guineensis Jacq., Olea europaea L., Allium cepa L., Citrus ×sinensis (L.) Osbeck, Carya illinoinensis (Wangenh.) K.Koch, Solanum tuberosum L., Plantago afra L., Chenopodium quinoa Willd., Phalaris arundinacea L., Oryza sativa L., Secale cereale L., Crambe maritima L., Sesamum indicum L., Sorghum bicolor (L.) Moench, Glycine max (L.) Merr., Beta vulgaris L., Saccharum officinarum L., Helianthus annuus L., Lupinus albus L., Ipomoea batatas (L.) Lam., Panicum virgatum L., Eragrostis tef (Zuccagni) Trotter, Solanum lycopersicum L., ×Triticosecale Wittm. ex A.Camus, ×Tritordeum Asch. & Graebn., Triticum aestivum L., Salix viminalis L., Brassica napus L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 2169061 records from 3992 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007690-240425142415019/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/bacf64544cde50dc0c21f13b3614c587
title: Long-term monitoring of herpetofauna along the Salt and Gila Rivers in and near the greater Phoenix metropolitan area, ongoing since 2012

description: Waterways are often the focus of restoration efforts in urban areas. In arid regions, passive discharge of urban water sources may stimulate the recovery or growth of wetland and riparian features in dewatered or ephemeral aquatic systems. In the greater Phoenix metropolitan area (GPMA), sections of the Salt and Gila Rivers have been the targets of active restoration through seeding, planting, and irrigation. At the same time, revegetation has occurred in some sections of the rivers in response to runoff from urban water sources (e.g., storm drains). This dataset catalogs the results of herpetological surveys conducted at several locations along the Salt and Gila Rivers in and around the GPMA beginning in March 2012. Survey locations include riparian areas in urban and non-urban locations that have been (actively) restored or have revegetated in response to urban runoff, and that feature ephemeral or perennial sources of water. This is a long-term monitoring effort of the CAP LTER with on-going data collection.
DOI: 10.15468/dl.zu4mk6
title: Occurrence Download

description: A dataset containing 62654 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Buphthalmum L."
 ]
}

 The dataset includes 62654 records from 326 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008483-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.495fcm
title: Occurrence Download

description: A dataset containing 104 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is China",
 "TaxonKey is Solenopsis invicta Buren, 1972"
 ]
}

 The dataset includes 104 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008503-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pcsce5
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.28_1",
 "TaxonKey is Gentiana clarkei"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041976-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/67exew
title: Données naturalistes opportunistes issues de la plateforme INaturalist-Données naturalistes opportunistes "marvet"

description: Données naturalistes opportunistes saisies sur iNaturalist à partir du compte "marvet"
DOI: 10.15468/dl.m2z2cy
title: Occurrence Download

description: A dataset containing 167992 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "Year is 2020",
 "InstitutionCode is iNaturalist"
 ]
}

 The dataset includes 167992 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041928-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qp6e3g
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.28_1",
 "TaxonKey is Juncus triglumis"
 ]
}

 The dataset includes 19 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041977-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.17635.89124
title: Habitats in transect 20210210_005_TZ
DOI: 10.15468/dl.8mm4vf
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Insecta)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((82.5 0,90 0,90 7.5,82.5 7.5,82.5 0))"
 ]
}

 The dataset includes 6 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041978-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/p4ujg8
title: Données naturalistes opportunistes issues de la plateforme INaturalist-Données naturalistes opportunistes "marine3105"

description: Données naturalistes opportunistes saisies sur iNaturalist à partir du compte "marine3105"
DOI: 10.13140/rg.2.2.14699.87840
title: DataSet_Link parameter
DOI: 10.15468/sqnwu2
title: Données naturalistes opportunistes issues de la plateforme INaturalist-Données naturalistes opportunistes "paulapan"

description: Données naturalistes opportunistes saisies sur iNaturalist à partir du compte "paulapan"
DOI: 10.15468/dl.y64npm
title: Occurrence Download

description: A dataset containing 459182 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cytisus scoparius"
 ]
}

 The dataset includes 459182 records from 2615 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041902-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26676821
title: Additional file 5 of Prediction of fruit characteristics of grafted plants of Camellia oleifera by deep neural networks

description: Additional file 5: Table S5 The MAPE values and R2 based on the validation and testing sets of the 12 characteristics in the RF mode
DOI: 10.6084/m9.figshare.26676821.v1
title: Additional file 5 of Prediction of fruit characteristics of grafted plants of Camellia oleifera by deep neural networks

description: Additional file 5: Table S5 The MAPE values and R2 based on the validation and testing sets of the 12 characteristics in the RF mode
DOI: 10.6084/m9.figshare.26676824
title: Additional file 6 of Prediction of fruit characteristics of grafted plants of Camellia oleifera by deep neural networks

description: Additional file 6: Table S6 The MAPE values and R2 based on the validation and testing sets of the 12 characteristics in the SVR modes
DOI: 10.6084/m9.figshare.26676824.v1
title: Additional file 6 of Prediction of fruit characteristics of grafted plants of Camellia oleifera by deep neural networks

description: Additional file 6: Table S6 The MAPE values and R2 based on the validation and testing sets of the 12 characteristics in the SVR modes
DOI: 10.6084/m9.figshare.26606899
title: Additional file 1 of ISG15 and ISGylation modulates cancer stem cell-like characteristics in promoting tumor growth of anaplastic thyroid carcinoma

description: Additional file 1: Fig. S1. ISG15 and KPNA2 inhibited CSCs characteristics. (A) Flow cytometry analysis of ALDH activity after ISG15 silence in ATC cells. (B) The GeneMANIA database to analyze the physical interaction of ISG15. (C) The secondary mass spectrometry of KPNA2 interacted with ISG15. (D) Recurrence free survival (RFS) analysis of KPNA2 in thyroid cancer was acquired from the Kaplan–Meier plot database. (E) Flow cytometry analysis of ALDH activity after KPNA2 silence in ATC cells. (F) The expression of c-MYC in NT or ATC tissues. (G) The Pearson correlation analysis of c-MYC and stemness. (H) Flow cytometry analysis of CD133+ cell ratio in ATC cells
DOI: 10.6084/m9.figshare.26669377
title: Data supporting results from Section 4.1 TANET

description: 'Exp1_MCs' contains a list of all minimal cuts'Exp1_Rc' - network reliabilities at level d=100 changing over time estimated by investigated algorithms: doi.org/10.1016/j.ress.2021.108289, doi.org/10.1016/j.simpat.2023.102865, and Kozyra's MC-reduction parallel simulation algorithm from section 3 with ith versions of parameters L and k for i in {1,2,3,4}. Notation occurring in this file is explained in Table 3'Exp1_res1' - network performances computed by Kozyra's MC-reduction parallel simulation algorithm from section 3 with 4 versions of parameters L and k'Exp1_RKi' network reliabilities at all levels changing over time estimated by Kozyra's MC-reduction parallel simulation algorithm from section 3 with ith versions of parameters L and k for i in {1,2,3,4}'Exp1_RPi' - the relative precision indicator computed by formula (7) for Exp1_RK1 and Exp1_RK_{i+1} for i in {1,2,3}'Exp1_T' - running times of investigated algorithms. Notation occurring in this file is explained in Table 3<br>
DOI: 10.6084/m9.figshare.26669377.v1
title: Data supporting results from Section 4.1 TANET

description: 'Exp1_MCs' contains a list of all minimal cuts'Exp1_Rc' - network reliabilities at level d=100 changing over time estimated by investigated algorithms: doi.org/10.1016/j.ress.2021.108289, doi.org/10.1016/j.simpat.2023.102865, and Kozyra's MC-reduction parallel simulation algorithm from section 3 with ith versions of parameters L and k for i in {1,2,3,4}. Notation occurring in this file is explained in Table 3'Exp1_res1' - network performances computed by Kozyra's MC-reduction parallel simulation algorithm from section 3 with 4 versions of parameters L and k'Exp1_RKi' network reliabilities at all levels changing over time estimated by Kozyra's MC-reduction parallel simulation algorithm from section 3 with ith versions of parameters L and k for i in {1,2,3,4}'Exp1_RPi' - the relative precision indicator computed by formula (7) for Exp1_RK1 and Exp1_RK_{i+1} for i in {1,2,3}'Exp1_T' - running times of investigated algorithms. Notation occurring in this file is explained in Table 3<br>
DOI: 10.15468/dl.yyevsw
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.951164 -32.640975, 148.951164 -32.64322, 148.955655 -32.64322, 148.955655 -32.640975, 148.951164 -32.640975))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067252-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26676857
title: Additional file 2 of Conventional dendritic cell 2 links the genetic causal association from allergic asthma to COVID-19: a Mendelian randomization and transcriptomic study

description: Additional file 2: Table S1. The datasets used in this study. Table S2. The number of instrument variables for exposures. Table S3. Instrument variables of allergic contact dermatitis due to drugs in contact with skin. Table S4. Instrument variables of allergic contact dermatitis. Table S5. Instrument variables of allergic rhinitis. Table S6. Instrument variables of asthma and allergy. Table S7. Instrument variables of atopic dermatitis. Table S8. Instrument variables of childhood allergy. Table S9. Instrument variables of dermatitis and eczema. Table S10. Instrument variables of dermatitis due to ingested food. Table S11. Instrument variables of COVID-19 hospitalization. Table S12. MR estimates of the causality from the allergy risk to COVID-19 risk. Table S13. Sensitivity analysis of the causality from the allergy risk to COVID-19 risk. Table S14. MR estimates and sensitivity analysis of the causality from the COVID-19 hospitalization to allergic asthma. Table S15. Comparison of immune cell populations in the blood between AA/COVID-19 patients and control subjects. Table S16. The rankings of immune cell power to distinguish AA patients and control subjects in the GSE69683 dataset. Table S17. The rankings of immune cell power to distinguish COVID-19 patients and control subjects in the GSE171110 dataset. Table S18. The rankings of immune cell power to distinguish COVID-19 patients and control subjects in the GSE196822 dataset. Table S19. The genes and functional consequences corresponded to instrumental variable SNPs of AA. Table S20. The expression of corresponding genes of AA SNPs in DCs and their role in DC differentiation.
DOI: 10.6084/m9.figshare.26676857.v1
title: Additional file 2 of Conventional dendritic cell 2 links the genetic causal association from allergic asthma to COVID-19: a Mendelian randomization and transcriptomic study

description: Additional file 2: Table S1. The datasets used in this study. Table S2. The number of instrument variables for exposures. Table S3. Instrument variables of allergic contact dermatitis due to drugs in contact with skin. Table S4. Instrument variables of allergic contact dermatitis. Table S5. Instrument variables of allergic rhinitis. Table S6. Instrument variables of asthma and allergy. Table S7. Instrument variables of atopic dermatitis. Table S8. Instrument variables of childhood allergy. Table S9. Instrument variables of dermatitis and eczema. Table S10. Instrument variables of dermatitis due to ingested food. Table S11. Instrument variables of COVID-19 hospitalization. Table S12. MR estimates of the causality from the allergy risk to COVID-19 risk. Table S13. Sensitivity analysis of the causality from the allergy risk to COVID-19 risk. Table S14. MR estimates and sensitivity analysis of the causality from the COVID-19 hospitalization to allergic asthma. Table S15. Comparison of immune cell populations in the blood between AA/COVID-19 patients and control subjects. Table S16. The rankings of immune cell power to distinguish AA patients and control subjects in the GSE69683 dataset. Table S17. The rankings of immune cell power to distinguish COVID-19 patients and control subjects in the GSE171110 dataset. Table S18. The rankings of immune cell power to distinguish COVID-19 patients and control subjects in the GSE196822 dataset. Table S19. The genes and functional consequences corresponded to instrumental variable SNPs of AA. Table S20. The expression of corresponding genes of AA SNPs in DCs and their role in DC differentiation.
DOI: 10.15468/dl.fzje9n
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.960147 -32.640975, 148.960147 -32.64322, 148.966884 -32.64322, 148.966884 -32.640975, 148.960147 -32.640975))"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067253-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26676929
title: Additional file 1 of Genome-wide quantification of copy-number aberration impact on gene expression in ovarian high-grade serous carcinoma

description: Additional file 1: Supplementary results. Copy number impact (CNI) on gene expression. Supplementary Figure 1. Examples of copy-number gene expression models. Supplementary Figure 2. CNI over all genes across different cancers, Supplementary Figure 3. Changes in CNI over the HGSC response groups, Supplementary Figure 4. The landscape of CNA versus CNI in the DECIDER HGSC cohort, Supplementary Figure 5. Pathway enrichment scores between the HGSC response groups of the potential CN driven pathways, Supplementary Figure 6. CNAs between the HGSC response groups of the potential CN driven pathways, Supplementary Figure 7. Gene expression correlation among top contributing genes to CNI in six pathways associated to survival., Supplementary Figure 8. KRAS CNA level and gene expression association with patient surviva, Supplementary Figure 9. Quantification of apoptotic cells percentage and colony intensities, Supplementary Table 1. CNA versus CNI across four driver gene sets in different cancers, Supplementary Table 2. CNA functional transition point and its range across whole genome, Supplementary Table 3. PID pathways and association to response groups, Supplementary Table 4. Characteristics of top genes in six survival associated pathways, Supplementary Table 5. Specificity of functional CNAs in the PID pathways, Supplementary Table 6. DECIDER HGSC cohort sample information, Supplementary Table 7. DECIDER HGSC cohort sample information, Supplementary Table 8. Primer/sgRNA sequences
DOI: 10.6084/m9.figshare.26676929.v1
title: Additional file 1 of Genome-wide quantification of copy-number aberration impact on gene expression in ovarian high-grade serous carcinoma

description: Additional file 1: Supplementary results. Copy number impact (CNI) on gene expression. Supplementary Figure 1. Examples of copy-number gene expression models. Supplementary Figure 2. CNI over all genes across different cancers, Supplementary Figure 3. Changes in CNI over the HGSC response groups, Supplementary Figure 4. The landscape of CNA versus CNI in the DECIDER HGSC cohort, Supplementary Figure 5. Pathway enrichment scores between the HGSC response groups of the potential CN driven pathways, Supplementary Figure 6. CNAs between the HGSC response groups of the potential CN driven pathways, Supplementary Figure 7. Gene expression correlation among top contributing genes to CNI in six pathways associated to survival., Supplementary Figure 8. KRAS CNA level and gene expression association with patient surviva, Supplementary Figure 9. Quantification of apoptotic cells percentage and colony intensities, Supplementary Table 1. CNA versus CNI across four driver gene sets in different cancers, Supplementary Table 2. CNA functional transition point and its range across whole genome, Supplementary Table 3. PID pathways and association to response groups, Supplementary Table 4. Characteristics of top genes in six survival associated pathways, Supplementary Table 5. Specificity of functional CNAs in the PID pathways, Supplementary Table 6. DECIDER HGSC cohort sample information, Supplementary Table 7. DECIDER HGSC cohort sample information, Supplementary Table 8. Primer/sgRNA sequences
DOI: 10.15468/dl.bfeyzb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.630014 -32.64322, 148.630014 -32.645466, 148.634506 -32.645466, 148.634506 -32.64322, 148.630014 -32.64322))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067254-240626123714530/datasets/export for details.
DOI: 10.15468/dl.fxecwz
title: Occurrence Download

description: A dataset containing 32989088 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Colombia"
 ]
}

 The dataset includes 32989088 records from 4785 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067187-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.