cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25504/fairsharing.1fbc5y
title: FAIRsharing record for: arrayMap - Genomic Array Data for Cancer CNV Profiles
title: arrayMap

description: This FAIRsharing record describes:  Part of the Progenetix project, the arrayMap database facilitates the study of the genetics of human cancer. The Progenetix project provides the data customisation and visualization tools to mine the available data. The arrayMap database is developed by the group "Theoretical Cytogenetics and Oncogenomics" at the Department of Molecular Life Sciences of the University of Zurich.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.65tdnz
title: FAIRsharing record for: Progenetix
title: Progenetix

description: This FAIRsharing record describes:  The Progenetix database provides an overview of copy number abnormalities in human cancer from Comparative Genomic Hybridization (CGH) experiments. Progenetix is the largest curated database for whole genome copy number profiles in cancer. The current dataset  contains more than 130'000 profiles from genomic CNV screening experiments. This data covers 700 diagnostic entities according to the NCIt Neoplasm Core  and the International Classification of Disease in Oncology (ICD-O 3). Additionally, the website attempts to lists all publications referring to cancer genome profiling experiments.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.qmygaa
title: FAIRsharing record for: GeneProf
title: GeneProf

description: This FAIRsharing record describes:  GeneProf Data is an open web resource for analysed functional genomics experiments. We have built up a large collection of completely processed RNA-seq and ChIP-seq studies by carefully and transparently reanalysing and annotating high-profile public data sets. GeneProf makes these data instantly accessible in an easily interpretable, searchable and reusable manner and thus opens up the path to the advantages and insights gained from genome-scale experiments to a broader scientific audience. Moreover, GeneProf supports programmatic access to these data via web services to further facilitate the reuse of experimental data across tools and laboratories.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.34pfmc
title: FAIRsharing record for: CentrosomeDB
title: CentrosomeDB

description: This FAIRsharing record describes:  CentrosomeDB is a collection of human and drosophila centrosomal genes that were reported in the literature and other sources. The database offers the possibility to study the evolution, function, and structure of the centrosome. They have compiled information from many sources, including Gene Ontology, disease-association, single nucleotide polymorphisms, and associated gene expression experiments.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.d404th
title: FAIRsharing record for: CiteAb
title: CiteAb

description: This FAIRsharing record describes:  CiteAb collects high quality citation data, powering a citation ranked reagent search engine that fundamentally changes the way researchers find the right products for their experiments. We also provide life science data services for pharma & biotech companies, reagent suppliers, and investors
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.5519/qd.7qsn3321
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (48 records)
DOI: 10.25504/fairsharing.7qexb2
title: FAIRsharing record for: Plant DNA C-values database
title: Plant C-Values

description: This FAIRsharing record describes:  A database containing genome size (C-value) data for all groups of land plants and red, green and brown algae.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.jwhdyr
title: FAIRsharing record for: ModBase database of comparative protein structure models
title: ModBase

description: This FAIRsharing record describes:  ModBase (https://salilab.org/modbase) is a database of annotated comparative protein structure models. The models are calculated by ModPipe, an automated modeling pipeline that relies primarily on Modeller for fold assignment, sequence-structure alignment, model building, and model assessment (https://salilab.org/modeller/). ModBase currently contains almost 30 million reliable models for domains in 4.7 million unique protein sequences. ModBase allows users to compute or update comparative models on demand, through an interface to the ModWeb modeling server (https://salilab.org/modweb).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.tgjsm4
title: FAIRsharing record for: bNAber
title: bNAber

description: This FAIRsharing record describes:  Discovery of Broadly Neutralizing Antibodies (bNAbs) has given a great boost to HIV vaccine research. Study of bNAbs capable of neutralizing a broad array of different HIV strains is important for a number of reasons: (i) structures of antigens co-crystallized with bNAbs are used as templates in HIV vaccine design; (ii) bNAbs can be effective as therapeutics; (iii) preventive use of bNAbs is a promising direction in AIDS care. The goal of bNAber is to collect, analyze, compare and present bNAbs data, thus helping researchers to create HIV vaccine.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.65yfxp
title: FAIRsharing record for: Protein Circular Dichroism Data Bank
title: PCDDB

description: This FAIRsharing record describes:  The Protein Circular Dichroism Data Bank (PCDDB) is an open-access online repository for protein circular dichroism spectral- and meta-data. Users may freely extract and deposit validated data and the validation process is conveniently integrated into the deposition procedure. The PCDDB is a collaborative project between Birkbeck College, University of London and Queen Mary University of London and is funded by the U.K.'s Biotechnology and Biological Sciences Research Council. 
Note from the FAIRsharing team: we have classified the status of the resource as 'uncertain' because the website is currently not available. Theresource owners have informed us that they have suffered a cyber attack, and are doing everything possible to get the site back online.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.f0bxfg
title: FAIRsharing record for: miRTarBase
title: miRTarBase

description: This FAIRsharing record describes:  As a database, miRTarBase has accumulated more than fifty thousand miRNA-target interactions (MTIs), which are collected by manually surveying pertinent literature after data mining of the text systematically to filter research articles related to functional studies of miRNAs. Generally, the collected MTIs are validated experimentally by reporter assay, western blot, microarray and next-generation sequencing experiments. While containing the largest amount of validated MTIs, the miRTarBase provides the most updated collection by comparing with other similar, previously developed databases.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.fssydn
title: FAIRsharing record for: DisGeNET
title: DisGeNET

description: This FAIRsharing record describes:  DisGeNET is a discovery platform containing one of the largest collections available of genes and variants involved in human diseases. DisGeNET integrates data from expert curated repositories, GWAS catalogues, animal models, and the scientific literature, and covers the whole landscape of human diseases. The current version of DisGeNET (v7.0) contains 1,134,942 gene-disease associations (GDAs), between 21,671 genes and 30,170 diseases, disorders, traits, and clinical or abnormal human phenotypes, and 369,554 variant-disease associations (VDAs), between 194,515 variants and 14,155 diseases, traits, and phenotypes. The data are homogeneously annotated with controlled vocabularies and community-driven ontologies. Additionally, several original metrics are provided to assist the prioritization of genotype-phenotype relationships. The information is accessible through a web interface, a Cytoscape App, an RDF SPARQL endpoint, a REST API, and an R package.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.g2cf4x
title: FAIRsharing record for: CollecTF
title: CollecTF

description: This FAIRsharing record describes:  CollecTF is a database of transcription factor binding sites (TFBS) in the Bacteria domain. It aims at becoming a reference, highly-accessed database by relying on its ability to customize navigation and data extraction, its relevance to the community, the quality and detail of the stored data and the up-to-date nature of the stored information.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.pkm8j3
title: FAIRsharing record for: Merritt
title: Merritt

description: This FAIRsharing record describes:  Provided by the University of California Curation Center (UC3), Merritt is a curation repository for the preservation of and access to the digital research data of the ten campus University of California system and external project collaborators. Merritt provides persistent identifiers, storage replication, fixity audit, complete version history, REST API, a comprehensive metadata catalog for discovery, ATOM-based syndication, and curatorially-defined collections, access control rules, and data use agreements (DUAs). Merritt content upload and download may each be curatorially-designated as public or restricted. Through use of its companion service, UC3's EZID, a new ARK is minted and used as a primary identifier for each digital object. When used as object local identifiers, DOIs are also provided by the EZID service, which in turn is integrated with DataCite. All DOIs and associated metadata are automatically registered with DataCite and are harvested by Ex Libris PRIMO and Thomson Reuters Data Citation Index (DCI) for high-level discovery.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.qv0f6x
title: FAIRsharing record for: Manually Curated Database of Rice Proteins
title: MCDRP

description: This FAIRsharing record describes:  The Manually Curated Database of Rice Proteins (MCDRP) is a manually-curated database based on published experimental data. The database contains data for rice proteins curated from experiments drawn from research articles. The database stores information including gene name, plant type, tissue and developmental stage. The homepage for this resource could not be loaded. Please contact us if you have any information regarding the current status of this resource.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.s1r9bw
title: FAIRsharing record for: OpenNeuro
title: OpenNeuro

description: This FAIRsharing record describes:  The OpenNeuro project (formerly known as the OpenfMRI project) was established in 2010 to provide a resource for researchers interested in making their neuroimaging data openly available to the research community. It is managed by Russ Poldrack and Chris Gorgolewski of the Center for Reproducible Neuroscience at Stanford University. The project has been developed with funding from the National Science Foundation, National Institute of Drug Abuse, and the Laura and John Arnold Foundation.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.17z0yf
title: FAIRsharing record for: iSpyBio
title: iSpyBio

description: This FAIRsharing record describes:  iSpyBio is an intelligent and unbiased search engine for Life scientists. It ranks reagents by the number of data such as publications, reviews, characterization images and tested applications. It displays over 500,000 reagents such as antibodies, proteins, ELISA kits and biomolecules. iSpyBio’s proprietary search algorithm is unique and rapidly analyzes the end-users search query against its large database. Powerful filters allow the user to enhance the search results, for example if they want a protein expressed in yeast or an antibody that only works in mouse. As iSpyBio syncs with supplier and other public databases, it is always up-to-date. This allows iSpyBio to exclude out of stock items but show the most recent testing results and peer-reviewed publications.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.qw7qtk
title: FAIRsharing record for: The MOuse NOnCode Lung database
title: MONOCLdb

description: This FAIRsharing record describes:  MONOCLdb is an integrative and interactive database designed to retrieve and visualize annotations and expression profiles of long-non coding RNAs (lncRNAs) expressed in Collaborative Cross (http://compgen.unc.edu/) founder mice in response to respiratory influenza and SARS infections.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.rm14bx
title: FAIRsharing record for: NeuroVault
title: NeuroVault

description: This FAIRsharing record describes:  The purpose of this database is to collect and distribute statistical maps of the human brain. Such maps are acquired by scientist all around the world using brain imaging techniques such as MRI or PET in a combined effort to map the functions and structures of the brain.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.y6w78m
title: FAIRsharing record for: Coherent X-ray Imaging Data Bank
title: CXIDB

description: This FAIRsharing record describes:  The Coherent X-ray Imaging Data Bank (CXIDB) offers scientists from all over the world a unique opportunity to access data from Coherent X-ray Imaging (CXI) experiments. It arose from the need to share the terabytes of data generated from X-ray free-electron laser experiments although it caters to all light sources. Accessibility is crucial not only to make efficient use of experimental facilities, but also to improve the reproducibility of results and enable new research based on previous experiments.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ajpk6x
title: FAIRsharing record for: International Neuroimaging Data-Sharing Initiative
title: INDI

description: This FAIRsharing record describes:  Database for open data sharing of resting-state fMRI and DTI images collected from over 50 sites around the world. These data collections now contain comprehensive phentoypic information, openly available via data usage agreements.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.kj4pvk
title: FAIRsharing record for: SciCrunch Data Dashboard
title: SciCrunch

description: This FAIRsharing record describes:  The SciCrunch Data Dashboard is a data sharing and display platform that pulls information from primary data repositories. Anyone can create a custom portal where they can select searchable subsets of hundreds of data sources, brand their web pages and create their community. SciCrunch will push data updates automatically to all portals on a weekly basis. SciCrunch resource registry is the new name of the NIF registry. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.jjka8c
title: FAIRsharing record for: Knowledge Network for Biocomplexity
title: KNB

description: This FAIRsharing record describes:  The Knowledge Network for Biocomplexity (KNB) is an international repository intended to facilitate ecological and environmental research. KNB was created to share, discover, access and interpret complex ecological data. Contextual information provided with KNB data allows scientists to integrate and analyze data. The data originate from a highly-distributed set of field stations, laboratories, research sites, and individual researchers. The foundation of the KNB is the detailed metadata provided by researchers, which promotes both automated and manual integration of data into new projects. As part of the KNB effort, data management software is developed in a free and open source manner, so other groups can build upon the tools. The KNB is powered by the Metacat data management system, and is optimized for handling data sets described using the Ecological Metadata Language, but can store any XML-based metadata document.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.txkh36
title: FAIRsharing record for: Database of Genomic Variants Archive
title: DGVa

description: This FAIRsharing record describes:  The Database of Genomic Variants archive (DGVa) is a repository that provides archiving, accessioning and distribution of publicly available genomic structural variants, in all species.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.6824pv
title: FAIRsharing record for: European Variation Archive
title: EVA

description: This FAIRsharing record describes:  The European Variation Archive is an open-access archive that accepts submission of, and provides access to, all types of genetic variation data from all species. All users are able to download any dataset, or query our study catalogue via our variation table. Access to EVA data is also provided by RESTful web services for a variety of applications, such as annotation pipelines.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.