cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16649716.v3
title: Network: usfs, Domain: krew

description: MacroSheds timeseries data, shapefiles, and metadata for domain: krew, within network: usfs
DOI: 10.6084/m9.figshare.16649719.v3
title: Network: usfs, Domain: santee

description: MacroSheds timeseries data, shapefiles, and metadata for domain: santee, within network: usfs
DOI: 10.6084/m9.figshare.16649722.v3
title: Network: usfs, Domain: suef

description: MacroSheds timeseries data, shapefiles, and metadata for domain: suef, within network: usfs
DOI: 10.6084/m9.figshare.16649731.v3
title: Network: usgs, Domain: usgs

description: MacroSheds timeseries data, shapefiles, and metadata for domain: usgs, within network: usgs
DOI: 10.6084/m9.figshare.16653076.v8
title: data_source_codes

description: See README
DOI: 10.6084/m9.figshare.16653079.v6
title: variable_category_codes

description: See README
DOI: 10.6084/m9.figshare.16653064.v4
title: watershed_summaries

description: See README
DOI: 10.6084/m9.figshare.16653067.v4
title: timeseries column descriptions

description: See README
DOI: 10.6084/m9.figshare.16653070.v3
title: watershed_summary column descriptions

description: See README
DOI: 10.6084/m9.figshare.16653073.v3
title: watershed_trait_timeseries column descriptions

description: See README
DOI: 10.6084/m9.figshare.16653076.v9
title: data_source_codes

description: See README
DOI: 10.6084/m9.figshare.16653079.v7
title: variable_category_codes

description: See README
DOI: 10.6084/m9.figshare.16653082.v2
title: README

description: See README
DOI: 10.6084/m9.figshare.19358570
title: watershed_attribute_LEGAL

description: See README
DOI: 10.6084/m9.figshare.19358570.v3
title: watershed_attribute_LEGAL

description: See README
DOI: 10.6084/m9.figshare.19358570.v2
title: watershed_attribute_LEGAL

description: See README
DOI: 10.6084/m9.figshare.19358576
title: timeseries_LEGAL

description: See README
DOI: 10.6084/m9.figshare.19358576.v3
title: timeseries_LEGAL

description: See README
DOI: 10.6084/m9.figshare.19358576.v2
title: timeseries_LEGAL

description: See README
DOI: 10.6084/m9.figshare.19358579.v2
title: data_use_POLICY

description: See README
DOI: 10.6084/m9.figshare.19358582.v2
title: site_metadata

description: See README
DOI: 10.6084/m9.figshare.19358585.v3
title: variable_metadata

description: See README
DOI: 10.6084/m9.figshare.19585810.v4
title: variable_catalog

description: See README
DOI: 10.48567/zjm6-ek25
title: Austin Automatic Weather Station, 2015 quality-controlled observational data.
DOI: 10.48567/hhwt-bp49
title: Baldrick Automatic Weather Station, 2015 quality-controlled observational data.
DOI: 10.5281/zenodo.6555248
title: Dataset for Rastogi et al., 2022 Geophysical Research Letters

description: This spreadsheet contains measurements and inferred quantities that are reported in Rastogi et al., 2022 (GRL).
DOI: 10.5281/zenodo.6555247
title: Dataset for Rastogi et al., 2022 Geophysical Research Letters

description: This spreadsheet contains measurements and inferred quantities that are reported in Rastogi et al., 2022 (GRL).
DOI: 10.6084/m9.figshare.19640235.v1
title: Timeline of oil and gas activity on the North Slope of Alaska from 2015 through 2021

description: The data follows a detailed timeline of oil development activity and interests in the North Slope of Alaska from 2015 through January 2021. The data support the follow up study on the North Slope Science Initiative Scenarios Project to identify various periods of high, medium and low development sceanrios for North Slope oil.
DOI: 10.6084/m9.figshare.19640235
title: Timeline of oil and gas activity on the North Slope of Alaska from 2015 through 2021

description: The data follows a detailed timeline of oil development activity and interests in the North Slope of Alaska from 2015 through January 2021. The data support the follow up study on the North Slope Science Initiative Scenarios Project to identify various periods of high, medium and low development sceanrios for North Slope oil.
DOI: 10.6084/m9.figshare.19640235.v3
title: Timeline of oil and gas activity on the North Slope of Alaska from 2015 through 2021

description: The data follows a detailed timeline of oil development activity and interests in the North Slope of Alaska from 2015 through January 2021. The data support the follow up study on the North Slope Science Initiative Scenarios Project to identify various periods of high, medium and low development sceanrios for North Slope oil.
DOI: 10.6084/m9.figshare.19640235.v2
title: Timeline of oil and gas activity on the North Slope of Alaska from 2015 through 2021

description: The data follows a detailed timeline of oil development activity and interests in the North Slope of Alaska from 2015 through January 2021. The data support the follow up study on the North Slope Science Initiative Scenarios Project to identify various periods of high, medium and low development sceanrios for North Slope oil.
DOI: 10.5281/zenodo.6524699
title: Part 1: Differential ADAR editing landscapes during fetal development

description: ADAR editing is a critical part of human brain development. Here we explore ADAR editing patterns in early development by studying human embryonic stem cells (hESC) that are differentiated into mesothelium, endothelium, neural crest cells, and pre-neural crest cells. To further explore fetal development we also used a study with fetal brain samples from 5 condensed regions and 3 gestational time points. We track editing patterns during these gestational weeks to study normal brain development to help understand the role of editing in neurodevelopmental, degenerative, and psychiatric disorders. These can potentially be used for clinical biomarkers. This is part 1 of the final vcf files for predicting RNA editing events in germ layer differentiation and early fetal development.
DOI: 10.5281/zenodo.6524698
title: Part 1: Differential ADAR editing landscapes during fetal development

description: ADAR editing is a critical part of human brain development. Here we explore ADAR editing patterns in early development by studying human embryonic stem cells (hESC) that are differentiated into mesothelium, endothelium, neural crest cells, and pre-neural crest cells. To further explore fetal development we also used a study with fetal brain samples from 5 condensed regions and 3 gestational time points. We track editing patterns during these gestational weeks to study normal brain development to help understand the role of editing in neurodevelopmental, degenerative, and psychiatric disorders. These can potentially be used for clinical biomarkers. This is part 1 of the final vcf files for predicting RNA editing events in germ layer differentiation and early fetal development.
DOI: 10.5281/zenodo.6551046
title: Part 2: Differential ADAR editing landscapes during fetal development

description: ADAR editing is a critical part of human brain development. Here we explore ADAR editing patterns in early development by studying human embryonic stem cells (hESC) that are differentiated into mesothelium, endothelium, neural crest cells, and pre-neural crest cells. To further explore fetal development we also used a study with fetal brain samples from 5 condensed regions and 3 gestational time points. We track editing patterns during these gestational weeks to study normal brain development to help understand the role of editing in neurodevelopmental, degenerative, and psychiatric disorders. These can potentially be used for clinical biomarkers. This is part 2 of the final vcf files for predicting RNA editing events in germ layer differentiation and early fetal development.
DOI: 10.5281/zenodo.6551045
title: Part 2: Differential ADAR editing landscapes during fetal development

description: ADAR editing is a critical part of human brain development. Here we explore ADAR editing patterns in early development by studying human embryonic stem cells (hESC) that are differentiated into mesothelium, endothelium, neural crest cells, and pre-neural crest cells. To further explore fetal development we also used a study with fetal brain samples from 5 condensed regions and 3 gestational time points. We track editing patterns during these gestational weeks to study normal brain development to help understand the role of editing in neurodevelopmental, degenerative, and psychiatric disorders. These can potentially be used for clinical biomarkers. This is part 2 of the final vcf files for predicting RNA editing events in germ layer differentiation and early fetal development.
DOI: 10.6073/pasta/9991295661980ff90924f9746b5f42ce
title: Cascade project at Norther Temperate Lake LTER – Daily Respiration Data for Whole Lake Nutrient Additions 2013-2015

description: Daily estimates of ecosystem respiration and values of covariates from surface waters of Paul, Peter, and Tuesday lakes from mid-May to early September for the years 2013, 2014, and 2015. Inorganic nitrogen and phosphorus were added to Peter and Tuesday lakes each year while Paul Lake was an unfertilized reference.
DOI: 10.6073/pasta/1daedb3a3b601d0fd9ccb4120cfb504e
title: Long Term Research in Environmental Biology (LTREB): California vernal pool plant community ecology and restoration, 2000-2017

description: This data set includes annual vegetation data and selected water depth data collected during the period 2000-2017 from vernal pool basins that were constructed in 1999 as part of a large-scale vernal pool mitigation effort at Travis Air Force Base, California. The constructed pools covered an area of about 15 Ha and were located adjacent to a complex of naturally-occurring pools, which were used as reference sites for comparison. Five plant species were intentionally seeded into the pools according to five seeding treatment protocols to assess the influence of order of colonization, frequency of colonization, and dispersal limitation on vernal pool plant community assembly. Because water depth was known to influence plant species distributions, water depth was recorded weekly during the winter wet season in selected years for each constructed and reference pool at the site. Seed plots were 50 cm x 50 cm and were permanently marked and used for repeated sampling of vegetation from 2000-2017. For each plant species that occurred in the plots, the frequency of occurrence was recorded as the number of squares out of a 100-cell grid laid over the plot in which that plant species appeared. For the five species that were planted into the plots, the frequency was recorded, as above, but in addition the number of individuals of that species in the plot was also recorded.
DOI: 10.6084/m9.figshare.19349255
title: Table S3_final

description: Supplementary Table 3. Comparison of leuprolide remote loaded PLGA microspheres to the commercial 1-month Lupron Depot(R)
DOI: 10.6084/m9.figshare.19349255.v1
title: Table S3_final

description: Supplementary Table 3. Comparison of leuprolide remote loaded PLGA microspheres to the commercial 1-month Lupron Depot(R)
DOI: 10.6084/m9.figshare.19349195
title: Table S1_final

description: Supplementary Table 1. <br> Particle size distribution and glass transition temperature (Tg) of blank microspheres and peptide loaded microspheres
DOI: 10.6084/m9.figshare.19349195.v1
title: Table S1_final

description: Supplementary Table 1. <br> Particle size distribution and glass transition temperature (Tg) of blank microspheres and peptide loaded microspheres
DOI: 10.6084/m9.figshare.12363968
title: Table 1_final

description: Table 1. Peptide-PLGA binding parameters by isothermal titration calorimetry at 37 °C in DMSO and efficiency of remote loading in PLGA 75/25 microspheres by absorption at 1 day at 37 °C.
DOI: 10.6084/m9.figshare.12363968.v1
title: Table 1_final

description: Table 1. Peptide-PLGA binding parameters by isothermal titration calorimetry at 37 °C in DMSO and efficiency of remote loading in PLGA 75/25 microspheres by absorption at 1 day at 37 °C.
DOI: 10.6084/m9.figshare.19349267.v1
title: Table S4_final

description: Supplementary Table 4. <br> Comparison of octreotide remote loaded PLGA microspheres to the commercial 1-month Sandostatin LAR (R).
DOI: 10.6084/m9.figshare.19349267
title: Table S4_final

description: Supplementary Table 4. <br> Comparison of octreotide remote loaded PLGA microspheres to the commercial 1-month Sandostatin LAR (R).
DOI: 10.6084/m9.figshare.19349273
title: Table S6_final

description: Supplementary Table 6. <br> Comparison of loading of leuprolide in preformed PLGA microspheres fabricated with or without trehalose or added PGLA purification steps. Theoretical load was 10 w/w%. Mean +/- SEM (n=3)
DOI: 10.6084/m9.figshare.19349273.v1
title: Table S6_final

description: Supplementary Table 6. <br> Comparison of loading of leuprolide in preformed PLGA microspheres fabricated with or without trehalose or added PGLA purification steps. Theoretical load was 10 w/w%. Mean +/- SEM (n=3)
DOI: 10.6084/m9.figshare.14191892
title: Table S5_final

description: Supplementary Table 5. Peptide stability in phosphate buffer. Mean ± SEM (n=3).<br>
DOI: 10.6084/m9.figshare.14191892.v1
title: Table S5_final

description: Supplementary Table 5. Peptide stability in phosphate buffer. Mean ± SEM (n=3).<br>
DOI: 10.6084/m9.figshare.12363998
title: Table S2_final

description: Supplementary Table 2. Quantification of peptide loading by mass loss, extraction or nitrogen analysis. Mean +/- SEM (n = 2). NA = quantification method not performed. Encapsulation efficiency (%) = peptide loading (%)/10%, as the theoretical loading was 10% w/w/<br> <br>
DOI: 10.17632/x5d48drkzs.1
title: OASIS study: supplementary data

description: Mendeley supplemental figure 1. Photographs from Group 1 illustrating ocular surface involvement under dupilumab. A. Bulge in limbal area; B. Perilimbal nodules; C. Perilimbal hyperemia; D. multiple white spots (Trantas dots).
DOI: 10.17632/58xgbgsx8b.1
title: Simultaneous presbyopia- and astigmatism correction with a novel trifocal toric intraocular lens - a one-year follow-up

description: Introduction: the current investigation aims to evaluate the efficiency of the trifocal toric Liberty 677MTY intraocular lens (IOL) in correcting preoperative corneal astigmatism in cataract patients demanding spectacle independence. Visual and refractive performance of the lens and visual quality and visual functions were assessed during the first postoperative year.
Methods: The retrospective evaluation included 26 eyes of 14 patients with preoperative corneal astigmatism of at least 1.0 Diopters (D). All patients were followed up for one year after the implantation of the investigated IOL. Residual refractive errors (spherical equivalent refraction: SEQ; astigmatism: Cyl) and uncorrected and corrected visual acuities at multiple distances were measured. Binocular visual acuity and contrast sensitivity defocus curves were plotted. Visual functions and patient satisfaction were assessed using a questionnaire completed by each patient. The efficiency of astigmatism correction was determined by using the vector analysis method.
 Results: The mean SEQ improved from 2.72 ± 1.62 D to 0.10 ± 0.48 D, while the cylindric refraction decreased from 1.18 ± 0.45 D to 0.16 ± 0.31 D. Vector analysis proved efficient astigmatism correction with a centroid of 0.10 ± 0.34 D at 161°. Ninety-two % of eyes resulted within 0.5 D from the target refraction, emmetropia. All eyes were within 1.0 D. An uncorrected distance visual acuity of at least 20/20 was achieved by 85% of eyes, and 69.2% had an unaided near vision of at least 20/25. Clinical outcomes were stable during the one-year follow-up. Visual acuities were 0.1 logMAR or better from +1.0 to -3.5 D defocus values. Visual tasks could be performed without, or only with minor difficulties. Our patients were highly satisfied with the outcomes.
Discussion: The toric model of the investigated presbyopia-correcting IOL was found to be efficient in vision correction of cataract patients with corneal astigmatism. Refractive and visual outcomes are predictable and provide excellent vision correction. Visual acuity and contrast sensitivity defocus curves confirm favourable visual quality across the entire defocus range. The objective measurements are supported by the visual function assessment and the high satisfaction rate of our patients. Visual outcomes are maintained during the first postoperative year.
DOI: 10.17632/h2xfj5fsxw.1
title: Evolutionary history of TOPIIA topoisomerases in animals

description: TOPIIA topoisomerases are required for the regulation of DNA topology by DNA cleavage and re-ligation and are important targets of antibiotic and anticancer agents. Humans possess two TOPIIA paralogue genes (TOP2A and TOP2B) with high sequence and structural similarity but distinct cellular functions. Despite their functional and clinical relevance, the evolutionary history of TOPIIA is still poorly understood. Here we show that TOPIIA is highly conserved and could be used to resolve deep phylogenies within Metazoa. We also found that TOPIIA paralogues from jawed and jawless vertebrates had different origins related with tetraploidization events. After duplication, TOP2B evolved under a stronger purifying selection than TOP2A, perhaps promoted by the more specialized role of TOP2B in postmitotic cells. We also detected genetic signatures of positive selection in the highly variable C-terminal domain (CTD), possibly associated with adaptation to cellular interactions. By comparing TOPIIA from modern and archaic humans, we found two amino acid substitutions in the TOP2A CTD, suggesting that TOP2A may have contributed to the evolution of present-day humans, as also suggested by other cell cycle-related genes. Finally, we identified six residues conferring resistance to chemotherapy differing between TOP2A and TOP2B. The six residues can be targets for the development of TOP2A-specific inhibitors that would avoid the side effects caused by inhibiting TOP2B. Altogether, our findings clarify the origin, diversification and selection pressures governing the evolution of animal TOPIIA.
DOI: 10.17632/g4pvnwt4jc.1
title: An empirical evaluation of machine learning techniques to classify code comprehension based on EEG data: Supplementary material

description: This is a supplementary material used to perform the evaluation of the classification of code comprehension based on EEG Data. This dataset includes the tasks, EEG data, and the machine learning source code to reproduce the results of the classification of developers' code comprehension based on EEG data.
DOI: 10.17632/x796nk5ysd.1
title: A metamodel-based flexible insulin therapy for type 1 diabetes patients subjected to aerobic physical activity

description: The model, the control law and the identification method have been released under licence CC-BY-4.0.
DOI: 10.5517/ccdc.csd.cc2brkf3
title: CCDC 2167595: Experimental Crystal Structure Determination

description: Related Article: P. Chooto, S. Saithong, W. Aemaeg, S. Vataporn, C. Pakawatchai, C. Innuphat, S. Duangthong, W. Puetpaiboon|2022|Acta Crystallogr.,Sect.E:Cryst.Commun.|78|519|doi:10.1107/S2056989022004224
DOI: 10.5281/zenodo.6555291
title: Gradients4-TN397-Nutrients_UW_2022-03-25_v1.0

description: Cruise Name: Gradients 4 , TN397 Vessel: R/V Thompson Funding: Simons Collaboration on Ocean Processes and Ecology (SCOPE) This dataset was collected on the R/V Thompson during the Gradients IV cruise which departed from San Diego, CA and ended in Honolulu, HI. A transect was performed on the 140 degree longitude line from roughly 19 degrees N to 2.5 degrees S before heading to Honolulu. Soluble reactive phosphate (SRP) and Nitrate + Nitrite (N+N) were measured by sampling directly from the ship's underway uncontaminated seawater system (intake depth 8m). Samples were collected at roughly 0600 and 1800 local time for the duration of the cruise by filling 120ml bottles and freezing them for laboratory analysis. Phosphate and nitrate+nitrite were determined colormetrically on two SEAL Analytical Autoanalyzers. Samples were corrected for a DI water blank and a reagent standard curve (4 concentrations for both SRP and N+N). Lat/lon were logged in person during sample collection and may not exactly match cruise log.
DOI: 10.5281/zenodo.6555290
title: Gradients4-TN397-Nutrients_UW_2022-03-25_v1.0

description: Cruise Name: Gradients 4 , TN397 Vessel: R/V Thompson Funding: Simons Collaboration on Ocean Processes and Ecology (SCOPE) This dataset was collected on the R/V Thompson during the Gradients IV cruise which departed from San Diego, CA and ended in Honolulu, HI. A transect was performed on the 140 degree longitude line from roughly 19 degrees N to 2.5 degrees S before heading to Honolulu. Soluble reactive phosphate (SRP) and Nitrate + Nitrite (N+N) were measured by sampling directly from the ship's underway uncontaminated seawater system (intake depth 8m). Samples were collected at roughly 0600 and 1800 local time for the duration of the cruise by filling 120ml bottles and freezing them for laboratory analysis. Phosphate and nitrate+nitrite were determined colormetrically on two SEAL Analytical Autoanalyzers. Samples were corrected for a DI water blank and a reagent standard curve (4 concentrations for both SRP and N+N). Lat/lon were logged in person during sample collection and may not exactly match cruise log.
DOI: 10.5281/zenodo.6555299
title: Gradients4-TN397-Hyperpro-UW_2022-04-06_v1.0

description: Cruise Name: Gradients 4 , TN397 Vessel: R/V Thompson Funding: Simons Collaboration on Ocean Processes and Ecology (SCOPE) Dataset description: This dataset was collected on the R/V Thompson during the Gradients IV cruise which departed from San Diego, CA and ended in Honolulu, HI. A transect was performed on the 140 degree longitude line from roughly 19 degrees N to 2.5 degrees S before heading to Honolulu.The Satlantic (now Seabird) HyperPro is an in-situ free-fall profiling unit designed to measure the apparent optical properties of the ocean with concurrent measurements of temperature, salinity, chlorophyll and dissolved matter fluorescence, and optical backscattering (a proxy for total particle load). The unit is equipped with one up-looking and one down-looking hyperspectral (350-800nm) radiometer with 10 ± 0.3 nm resolution, a WET Labs ECO-Puck Triplet, and temperature, pressure, and conductivity sensors. It also incorporates a ship-mounted surface (air) hyperspectral radiometer. This dataset is derived from the ship-mounted surface (air) hyperspectral radiometer. These photosynthetically active radiation - PAR(0+) - data are reported from the duration of the cruise.
DOI: 10.5281/zenodo.6555298
title: Gradients4-TN397-Hyperpro-UW_2022-04-06_v1.0

description: Cruise Name: Gradients 4 , TN397 Vessel: R/V Thompson Funding: Simons Collaboration on Ocean Processes and Ecology (SCOPE) Dataset description: This dataset was collected on the R/V Thompson during the Gradients IV cruise which departed from San Diego, CA and ended in Honolulu, HI. A transect was performed on the 140 degree longitude line from roughly 19 degrees N to 2.5 degrees S before heading to Honolulu.The Satlantic (now Seabird) HyperPro is an in-situ free-fall profiling unit designed to measure the apparent optical properties of the ocean with concurrent measurements of temperature, salinity, chlorophyll and dissolved matter fluorescence, and optical backscattering (a proxy for total particle load). The unit is equipped with one up-looking and one down-looking hyperspectral (350-800nm) radiometer with 10 ± 0.3 nm resolution, a WET Labs ECO-Puck Triplet, and temperature, pressure, and conductivity sensors. It also incorporates a ship-mounted surface (air) hyperspectral radiometer. This dataset is derived from the ship-mounted surface (air) hyperspectral radiometer. These photosynthetically active radiation - PAR(0+) - data are reported from the duration of the cruise.