cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.4648963.v2
title: Post-breeding movements of Ancient Murrelet Synthliboramphus antiquus family groups and subsequent oriented chain migration of adults 2014-15

description: In 2014 we deployed geolocator loggers on Ancient Murrelets at 4 breeding colonies, 2 on the east and 2 on the west coast of Haida Gwaii to investigate patterns of post-breeding dispersal and subsequent migratory movements. Birds from east coast colonies moved south and east, remaining in Queen Charlotte Sound and adjacent waters for 4-6 wks, whereas those from west coast colonies moved steadily north and west, leaving BC waters earlier than those from east coast colonies. These movements were consistent with being driven by surface currents. In June, all birds moved rapidly to the eastern Aleutians, SE Bering Sea, and waters off Kamchatka, where they probably moulted. In Aug, most moved north, some passing through Bering Straits into the Chukchi Sea. In Oct-Nov some birds returned to waters off western NA and the remainder carried on westwards to waters off Japan, Korea and NE China. Those birds wintering in Asia began moving east in February and arrived off BC in March.
DOI: 10.3535/pk0-a1z-1sk
title: Palaeophyllum V.P. Maslov, 1950

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y9w-yag-2q6
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5350393.v1
title: Generation of AMBER force field parameters for zinc centres of M1 and M17 family aminopeptidases

description: The M1 and M17 aminopeptidases are metallo-exopeptidases that rely on the presence of divalent cations, usually zinc, in their active site for proteolytic activity. They are from separate protease superfamilies, however, members often have overlapping substrate specificity. Inhibitors of one or both enzymes can be used to modulate hypertension, reduce proliferation of certain types of cancers and control malaria parasites. Current inhibitors act to chelate the zinc ions in the active site, locking the enzymes in an inactive transition state. We were interested in using a computational approach to understand the structure and dynamics of the M1 and M17 aminopeptidases, however, the presence of the essential metal ions in the proteases presents a challenge to classical molecular dynamics (MD) simulation. The zinc amber force field does not contain applicable descriptions of the zinc coordination environment present in either of these two protease families. To provide tools for the study of these two enzymes, we have used the metal centre parameter builder to generate new hybrid bonded/nonbonded force field (FF) parameters to correctly describe the active site architecture for each enzyme. The new parameters were evaluated by fitting the normal mode frequencies of molecular mechanics to the quantum mechanics frequencies and validated by performing short MD simulations. The new FF parameters now enable more accurate and reliable MD simulations for any member of the M1 or M17 aminopeptidase superfamilies.
DOI: 10.6084/m9.figshare.7730471.v1
title: Behavioural changes in African elephants during wildlife viewing

description: These are the R codes and the .csv files needed for the statistical analyses of behaviour and travel direction of African elephants<br>
DOI: 10.3535/gtz-ysk-1v8
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sef-es7-vj8
title: †Subulites Emmons, 1842

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/x874g734p6
title: Antagonistic activity of Bacillus amyloliquefaciens subsp. amyloliquefaciens against multidrug resistant Serratia rubidaea

description: Serratia rubidaea is an opportunistic Gram-negative pathogen that has developed antimicrobial resistance to a variety of commercial antibiotics. The spread of this multidrug-resistant pattern predicts that it will get harder and harder to treat S. rubidaea infections in the future. For this perception, antimicrobial proteins might represent a safe, effective, and biodegradable alternative because their site of action is on cyclic peptides. In this study, one candidate Bacillus amyloliquefaciens subsp. amyloliquefaciens was isolated from the soil of Sundarban mangrove forest, and its identification was confirmed both using the PCR (Polymerase chain reaction) method and the BIOLOG™ microbial identification system. The antibacterial protein, which has a molecular mass of about 50 kDa, was isolated from B. amyloliquefaciens subsp. amyloliquefaciens. Sodium dodecyl-sulfate polyacrylamide gel electrophoresis (SDS-PAGE) was used to confirm the extracted protein's purity. This potential protein was discovered to develop and exhibit antagonistic activity throughout a broad temperature, pH, and salinity range. At doses ranging from 300 to 400 μg/ml, this protein has antagonistic activity against multidrug resistant S. rubidaea and a wide range of other resistant pathogenic bacteria such as Escherichia coli, Staphylococcus aureus, Pseudomonas aeruginosa and so on. The research provides new insights to develop bio-control agents that can be applied for prevent, treat, and control infectious diseases caused by multidrug resistant S. rubidaea, as well as other pathogenic bacteria.
DOI: 10.3535/fk5-yzb-kdc
title: Tabulata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/2tf-g27-c8k
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/94r-k5k-zxp
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19134488.v1
title: Supplementary file 1.docx

description: <sup>1</sup>H-, <sup>13</sup>C- and 2D-NMR data for lupeol and pristimerin.
DOI: 10.6084/m9.figshare.4055556.v1
title: Aguirre_2016_PLOSOne_MPRAGE_Data.tgz

description: These are MPRAGE images of the brain obtained from sighted and blind subjects. The data are the basis of this preprint:<br>http://biorxiv.org/content/early/2016/08/31/065441<br>And this in press paper:<br>Aguirre GK, Datta R, Benson N, Prasad S, Jacobson SG, Cideciyan AV, et al. (In Press) Patterns of individual variation in visual pathway structure and function in the sighted and blind. PLoS One
DOI: 10.3535/551-63p-pl4
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dkn-q4r-3v6
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22654954.v1
title: The abundance of gut microbiota in Japanese patients with solid tumors

description: Using the composition of each individual's gut microbiota, this raw data was used to study the association between gut microbiota and anti-PD-1 antibody efficacy and immune-related adverse events (irAEs) in Japanese patients with solid tumors.
DOI: 10.6084/m9.figshare.27262830.v1
title: State shyness

description: a within-subject experimental design with a single factor (experimental condition: state shyness induction vs. control)
DOI: 10.6084/m9.figshare.27901164.v1
title: Data for "The value of social media wildlife sightings for elusive species monitoring: A population assessment of servals in a South African urban nature reserve"

description: Citizen science data from social media platforms is an underutilised resource for wildlife research, especially in studying enigmatic species. This study evaluates the potential of such data to provide population and behavioural insights into an elusive species, the serval (<i>Leptailurus serval</i>), from Rietvlei Nature Reserve, an urban protected area in South Africa. We collected 153 visitor sightings of servals within the reserve from different online platforms spanning from June 2011 to August 2024, from which we identified 30 different individual servals, including three long-term residents. Analysis of these sightings revealed a stable serval population with evidence of reproduction within the reserve and migration through a permeable border fence. Behavioural information from the sightings, such as prey captured and habitat use, align with existing knowledge of serval ecology.
DOI: 10.3535/her-82d-2jm
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y2s-0z6-9mn
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.9956591.v1
title: Clinical Metacohort (anthra vs taxane)

description: Breast Cancer Expression cohort anthracycline vs taxane
DOI: 10.17632/r37m2zrks5
title: Data for: NO2 hotspots: are we measuring in the right places?

description: concentration data shown in paper
DOI: 10.3535/asx-edx-xy5
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rj5-6qd-69w
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19498309.v1
title: Additional file 3 of The landscape of GWAS validation; systematic review identifying 309 validated non-coding variants across 130 human diseases

description: Additional file 3 contains all the validated variants and their details. The file is formatted to include separate rows for unique PMID-variant-gene triples, therefore variants that regulate multiple genes and variants that have been validated in more than one publication have more than one row in the file.
DOI: 10.6084/m9.figshare.c.3715003_d2.v1
title: Additional file 2: of Influence of temperature fluctuations during cryopreservation on vital parameters, differentiation potential, and transgene expression of placental multipotent stromal cells

description: Microarray analysis. Gene regulation in the samples differentiated after cryopreservation procedures with constant temperatures and temperature fluctuations in comparison to the native cell differentiation. Genes with regulation from twofold to 10-fold. (XLSX 382 kb)
DOI: 10.3535/b4t-3rp-s9m
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/h67-w1y-768
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.28573850.v1
title: Modulating competitive adsorption of hybrid self-assembled molecules for efficient wide-bandgap perovskite solar cells and tandems

description: Fractional coordinates of optimized structures, initial and final molecular dynamics configurations
DOI: 10.3535/7m2-jjx-q2e
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yff-erk-23g
title: †Sowerbyella Jones, 1928

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5281/zenodo.4482592
title: Koranic Science, a Commentary [IO Islamic 334]

description: al-Qurʼān القرآن الكريم
	
This manuscript is now IO Islamic 334 in the India Office collections.
	
[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 72 here with further notations and hyperlinks].



72.


334. Size 111/2 in. by 71/2 in.; foll. 534. About twenty-five lines in a page.


BAIḌÂWÎ’S Commentary in two volumes. The second begins on fol. 303, with Sû. 19. Written in Nastalik, chiefly by two hands. The following account of the MS. is given in the colophon:


و المستسعد بالکتابة من اولها اکثر الاجزآء و بعض الاوسط عمّی و استادی و سندی عبد الولی غفر الله له و بعض الاوسط و الاکثر من الآخر علی ید الضعیف الراجی الی الله القوی عبد الحفیظ الحافظ ابن محمد حافظ ابن ابو اسلم ابن ابو هاشم ابن قاضی کرم الله ابن قاضی مبارکشاه سنکهانوی.


Dated Monday, 23rd Jumâda II., 1136.


The first few leaves are covered with glosses. Two leaves are missing after fol. 5; fol. 48 should come after 53, and fol. 477 after 482. Pencil notes by an English reader.


 


[Hastings.]
DOI: 10.5281/zenodo.4482593
title: Koranic Science, a Commentary [IO Islamic 334]

description: al-Qurʼān القرآن الكريم
	
This manuscript is now IO Islamic 334 in the India Office collections.
	
[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 72 here with further notations and hyperlinks].



72.


334. Size 111/2 in. by 71/2 in.; foll. 534. About twenty-five lines in a page.


BAIḌÂWÎ’S Commentary in two volumes. The second begins on fol. 303, with Sû. 19. Written in Nastalik, chiefly by two hands. The following account of the MS. is given in the colophon:


و المستسعد بالکتابة من اولها اکثر الاجزآء و بعض الاوسط عمّی و استادی و سندی عبد الولی غفر الله له و بعض الاوسط و الاکثر من الآخر علی ید الضعیف الراجی الی الله القوی عبد الحفیظ الحافظ ابن محمد حافظ ابن ابو اسلم ابن ابو هاشم ابن قاضی کرم الله ابن قاضی مبارکشاه سنکهانوی.


Dated Monday, 23rd Jumâda II., 1136.


The first few leaves are covered with glosses. Two leaves are missing after fol. 5; fol. 48 should come after 53, and fol. 477 after 482. Pencil notes by an English reader.


 


[Hastings.]
DOI: 10.3535/2gd-eat-mbl
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/xmh-rkh-1xq
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1549709.v1
title: MRImages to Graphs: A One-Click Communityt Pipeline for MR Connectome Generation and Analysis

description: ICM Poster Presentation Session 2015
DOI: 10.17632/4kv68ds8p5
title: Proteomics and pathway enrichment analyses of Caenorhabditis elegans exposed to Capsaicin and Eugenol 

description: Proteomic data extracted from Proteome discoverer 2.4. Pathway analysis performed with Metascape.
DOI: 10.3535/k4v-s51-y63
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rdw-26w-d5s
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.19123637.v10
title: Sexual Violence and the Object of Attribution of Responsibility in Georgian Students

description: Transcripts of interviews, Quantitative results data (the percentages relating to the participants assessments of each case), Copy of the interview guide.
DOI: 10.6084/m9.figshare.28519973.v1
title: RAW Data and Figures for "Reinforcement of Conformity to the Majority or Minority: Effects of Task Ambiguity and the Salience of Reinforcing Stimuli"

description: This dataset contains both the RAW materials, the Tables and Figures supporting the findinfs of "Reinforcement of Conformity to the Majority or Minority: Effects of Task Ambiguity and the Salience of Reinforcing Stimuli"<br><br><br><br>
DOI: 10.6084/m9.figshare.9209390.v1
title: Soil fungal communities differ between shaded and sun-intensive coffee plantations in El Salvador

description: We collected soil samples from a sun coffee system, shade coffee system, and nearby forest from Izalco, Sonsonate, El Salvador. At each coffee system, we collected soil samples from the surface (upper) and 10 cm below the surface (lower), and from the coffee plant drip line (drip line) and the walkway between two plants (walkway). Forest samples were collected from the soil surface only. We used high-throughput ITS meta-barcode sequencing to characterize soil fungal communities and assigned fungal taxa to functional guilds using FUNGuild. <br>Dataset includes R code for main analyses (coffee_R.R). Main files to bring in for that code are the feature table (ASV x sample matrix) = "table-with-taxonomy2.biom", metadata file = "sample_metadata_coffee_final2.txt", tree file = "tree.nwk". Second R file is for the analyses after funguild categories were assigned (coffee_R_funguild.R). The same files are brought in except the taxonomy file to use is "coffee_taxonomy_funguild.csv" which has the funguild assignments.
DOI: 10.3535/acl-t0t-hqy
title: Favositida

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/dx2-e5a-vye
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23269001.v1
title: Example2

description: dsavsd
DOI: 10.3535/9rf-ps3-bwc
title: Granulite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/c6b-v5h-kz4
title: Catenipora cf. tapaensis

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.7393226.v1
title: “Critical Transitions” and “Avalanches” in Journal-Journal Citation Relations

description: Using the complete Journal Citation Reports (Science Citation Index, SCI, and Social Sciences Citation Index, SSCI) during the period 1994-2016 as data, we address the question of change and stability in the sciences at the level of the (n2) aggregated citation links between (n) journals. Information theory enables us to study longitudinal developments first at the level of cells and then to aggregate, since the Shannon-formulae are based on using Ss. Micro-developments in the data can thus be related to theorizing about the sciences in terms of distributed change (Price, 1976; cf. Kuhn, 1962).
DOI: 10.3535/a7z-x5e-pj9
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/yp2-0fz-gc0
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.10058720.v3
title: CaseData2020PES

description: Two test systems are provided in the Matpower format.
DOI: 10.6084/m9.figshare.28087469.v1
title: Sustainable behavior survey submitted to students of Chiavari - Italy(H2020 I-CHANGE project)

description: Findings from Surveys Conducted in Chiavari (Liguria, Italy) as Part of the H2020 I-CHANGE Project Activities
DOI: 10.3535/ddx-m3e-aqm
title: †Encrinurus punctatus (Wahlenberg, 1821)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/kj0-038-ge8
title: †Hesperorthis Schuchert & Cooper, 1931

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.17696597.v1
title: Adolescent, internet addiction, violence tendency, insomnia

description: <b>Internet Addiction, Insomnia and Violence Tendency in Turkish Adolescents</b><b> </b><br>
DOI: 10.6084/m9.figshare.25855519.v1
title: Network data

description: Edge lists of network data in csv format. Each row represents an edge. Each column represents the source and target node, respectively.
DOI: 10.17632/ctvvsbn3kx
title: Supplemental material Methotrexate Dosing Regimen for Plaque-type Psoriasis: An Update of a Systematic Review: Table S1a. – S1b.

description: Supplementary material
Table S1a. Characteristics and efficacy of the included RCTs and aggregated evidence for adults and children and adults
Table S1b. Dosing regimens in the included RCTs and aggregated evidence
DOI: 10.3535/6sb-n35-ka9
title: Streptelasma

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/qgf-t2g-vmq
title: †Encrinurus punctatus (Wahlenberg, 1821)

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1153674.v1
title: 考研数一历年题目类型总结

description: 历年题目总结
DOI: 10.3535/1k8-qzr-3av
title: Saponite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/57e-ve1-z6d
title: Heliolitoidea

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/yp48hvz6cm
title: Data for: A Study on the Pelletizing Condition for Roll Compaction of Powdered Radioactive Wastes

description: Low and intermediate-level radioactive wastes roll compaction technology Volume reduction
DOI: 10.3535/mg4-3fc-lfx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p6t-nw4-zq6
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.1418317.v1
title: High resolution locomotor time series in Japanese quail in a home-cage environment over a 6.5 day period (quail #1-group 1)

description: Each data point represents a 0.5s time interval (xi) in which the quail could either been ambulating (xi=1) or immobile (xi=0), over a 6.5 day period .The total number of data points is approximately 1.070.000. This time series has both a fractal pattern, as well as ultradian and circadian rhythms. <strong>This is the data from quail number 1, of the first experimental group.</strong> In this experiment in a whole, the locomotor activity of 24 adult females quail (100-140 days old) was evaluated in a home-cage environment in a white wooden box measuring 40 x 40 x 40 cm (width x length x height, respectively) with a wire mesh floor. A metal bar wall divided the box in two same-size zones (feeding, nesting), and an opening served as a door allowing the bird to move freely between compartments. A video camera that automatically switched to infrared recording after lights were turned off was suspended 1.5m above the box. It was connected to a computer in an adjacent room and could be accessed remotely by experimenters. Testing began at approximately 1:00 PM, when 12 quail were placed in a box, and transported to a nearby experimental room. Each bird was then placed individually in the feeding zone of one of the boxes. During the following 6.5 days, the birds’ locomotor activity was continuously recorded. Testing ended at 9 PM the 7th day. Daily maintenance activities (egg collection, cleaning and feeding) were performed between 12 and 12:30 PM; the activity during this period was not included in time series, which in total implied a loss of 2% from the data set. Since only 12 birds could be tested simultaneously, two consecutive groups of 12 individuals were evaluated (group 1 and group 2). We used the commercially available ANY-MAZE@ computer program to register locomotion at 0.5 s intervals (xi). The locomotor time series (1.07e6 time intervals) of each bird was obtained by assigning a number one (xi = 1) if during the interval the bird was ambulating, or a zero (xi = 0) if immobile.
DOI: 10.6084/m9.figshare.28509314.v2
title: U.S. Federal Civil Position Job Postings (2018-2023)

description: Data and Dofile for the U.S. Federal Civil Position Job Postings (2018-2023)
DOI: 10.6084/m9.figshare.c.3831283_d11.v1
title: Additional file 1: of Hybrid assembly with long and short reads improves discovery of gene family expansions

description: Rice assembly size statistics. (XLSX 42Â kb)
DOI: 10.3535/qz3-18m-wkg
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.