cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/w8zr6bgpsz
title: 5α-reductase inhibitors in men aged 50 years or older with androgenetic alopecia: a retrospective study

description: Androgenetic alopecia global photographs pre- and post-treatment of with 5α-reductase inhibitors (5ARI). The images compared patients before and after 5ARI treatment. Patient 1(M/55): greatly increased improvement(seven-point score: 3) after 10 months of dutasteride treatment (0.5 mg/d); patient 2(M/61): moderately increased improvement(seven-point score: 2) after 1 year of finasteride treatment (1 mg/d); patient 3(M/65): slightly increased improvement(seven-point score: 1) after 6 months of dutasteride treatment (0.5 mg/d); patient 4(M/77): slightly increased improvement(seven-point score: 1) after 9 months of finasteride treatment (1 mg/d).
DOI: 10.3535/1ye-0j5-tyb
title: †Trilobita

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/smy-8qj-g9k
title: Minerals

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13549070.v1
title: Genomic and anatomical comparisons of skin support independent adaptation to life in water by cetaceans and hippos

description: Nexus alignment files for skin genes that are inactivated in cetaceans and hippos.
DOI: 10.6084/m9.figshare.14431067.v1
title: SNVs and INDELs of 317 HNSCCs

description: SNVs and INDELs of 317 HNSCCs
DOI: 10.6084/m9.figshare.28035479.v1
title: DATA.xlsxAntibiotics

description: Antibiotics, Knowledge, Attitude, Practice
DOI: 10.6084/m9.figshare.809581.v1
title: Spatial Demography Column 2 Data and Code

description: THese are extracts from American Factfinder 2, and are the data for the column in the Spatial Demography Journal
DOI: 10.3535/v60-lxv-pan
title: †Subulites Emmons, 1842

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/724-b6p-ydm
title: †Subulites Emmons, 1842

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/tls-8xr-9kv
title: Agate

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/8g0-nxa-cb1
title: sedimentary rocks

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/9bt-m7x-ryp
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4s5-wdp-5xt
title: Pectolite

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5eq-9ha-hjs
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26119069.v1
title: Tabla 2. Características de los estudios incluidos en la revisión sistemática.

description: Revisión sistemática sobre estrategias de comunicación aumentativa y alternativa.<br>
DOI: 10.3535/5rk-4gp-jfx
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jf2-x92-vbc
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13365245.v1
title: Dataset related to the "The use of the intensive longitudinal methods to study financial well-being: A scoping review and future research agenda" article

description: This file reports the results of a literature review done to identify documents which investigated the financial well-being adopting the intensive longitudinal method.We decided to search in three electronic databases: Scopus, PsycINFO and Econpapers. These databases were chosen to cover more than 20 disciplines, including those usually interested in the study of financial well-being. The search was performed on January 16<sup>th</sup>, 2020, with no restrictions to the date of publication or language, using the following syntax: ("financial well*" OR "economic well*" OR "financial satisfaction" OR “financial stress” OR "income" OR “money” OR “expense” OR “debt”) AND ("intensive longitudinal" OR "experience sampling" OR "daily diary" OR "interaction records" OR "ecological momentary assessment" OR "ambulatory assessment" OR "real-data capture"). <br>
DOI: 10.3535/9lm-d2m-q4v
title: †Trilobita

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ycs-t78-3tp
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/rszp56tjmy
title: U-Serrated and N-Serrated Patterns in Bullous Pemphigoid, Epidermolysis Bullosa Acquisita, and Bullous Lupus: A Retrospective Observational Study

description: Direct immunofluorescence specimen stained for IgG with an n-serrated pattern in a case of bullous pemphigoid.
DOI: 10.3535/4pn-fre-nb9
title: Gastropoda Cuvier, 1795

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s01-tb8-z0e
title: Turbo Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rby-ncw-tsa
title: †Trilobita

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vrc-c4q-2n7
title: †Trilobita

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.15164310.v1
title: EddyPro output files

description: These are EddyPro output files, which provide the original flux data for the study 'Methane emissions offset net carbon dioxide uptake from an alpine peatland on the Eastern Qinghai-Tibetan Plateau'.
DOI: 10.3535/dhl-p7c-e04
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/l99-fmm-r22
title: Opal

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5281/zenodo.4459474
title: Koranic Science Taisîr [IO Bijapur 272]  varia with الشاطبیة

description:  



This manuscript is now IO Bijapur 272 in the India Office collections.

[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 43 here with notations and hyperlinks].


43.

B 272. Size 91/2 in. by 71/2 in.; foll. 116. Seven lines (verses) in a page.





(foll. 1-92). A metrical version of the preceding work, by Abu’l- ḳâsim b. Fîrruh b. Khalaf b. Aḥmad Ru’ainî SHÂṬIBÎ (d. A. H. 590 [=1194 CE]). It is entitled: حرز الامانی و وجه التهانی, but commonly called الشاطبیة. See Ḥ. Kh. iii., 43; Catal. Bodl. ii., p. 323; Nöldeke, Gesch. d. Qorâns, p. 337 sq.



Well written in a large hand, with vowel-points. The first two pages ornamented with red lines. Interlinear and marginal notes.

        2. Several tracts on the versions of the Koran:

Fol. 93r. The first Sûrah, with all the unusual readings, inscribed سورة الفاتحة بقراءة الشاذة; written in a large character.

Fol. 93v. A short Persian tract, beginning

بعضی از احکام ورش اگر میان کسره ورا ساکنی حایل باشد

Fol. 95v. A list of the ten readers and their disciples.

Fol. 96v. The beginning of a treatise on Orthoepy, ascribed to MUḤAMMAD SAMARḲANDÎ. It commences:

هذه رسالة سمرقندی من مصنفات

الحافظ محمد سمرقندی الاول فی تجوید فاتحة الکتاب

All the general principles of reading are exemplified from the first Sûrah, as usual. Abbreviations are used for the names of the readers, according to the system of Shâṭibî. Some confusion begins on fol. 105v., where a passage from fol. 102r. (الوقف علی الهمزة الخ) is repeated, but with a different conclusion on fol. 107r., where the MS. Abruptly ends. After some blank leaves, it recommences in the middle of fol. 108r. with the heading ذکر ذال اذ (which is also added as a catch-word to the former passage). It remains, however, doubtful whether this latter fragment belongs to the same treatise. Badly written.

Worm-eaten and stained by damp.

Bîj. Libr. A. H. 1003 [=1594-95 CE]. Catal. p. 234, Tujweed ii.



[ed note: Quick link to other manuscripts of حرز الامانی و وجه التهانی]
DOI: 10.6084/m9.figshare.10352375.v5
title: Genomic epidemiology of Campylobacter jejuni associated with asymptomatic paediatric infection in the Peruvian Amazon

description: <i>Campylobacter </i>is the leading bacterial cause of gastroenteritis worldwide and its incidence is especially high in low and middle income countries (LMIC). Disease epidemiology in LMICs differs from Europe and the USA as repeated and persistent infections lead to deficits in early childhood development. In this study, we sequenced and characterized C. jejuni (n=62) from a longitudinal cohort study of children under the age of 5 with and without diarrheal symptoms, and contextualized them within a global <i>C. jejuni </i>genome collection. Epidemiological differences in disease presentation were reflected in the genomes, specifically by the absence of some of the most common global disease-causing lineages. As in many other countries, poultry-associated strains were a major source of human infection but almost half of local disease cases (15 of 31) were attributable to genotypes that are rare outside of Peru. Asymptomatic infection was not limited to a single (or few) human adapted lineages but resulted from phylogenetically divergent strains suggesting an important role for host factors in the cryptic epidemiology of campylobacteriosis in LMICs.<br>
DOI: 10.3535/ep9-z76-yn4
title: Bryozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/wre-fkb-1lk
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.5281/zenodo.4459473
title: Koranic Science Taisîr [IO Bijapur 272]  varia with الشاطبیة

description:  



This manuscript is now IO Bijapur 272 in the India Office collections.

[metadata: Otto Loth, A Catalogue of the Arabic Manuscripts in the Library of the India Office, (volume 1), no. 43 here with notations and hyperlinks].


43.

B 272. Size 91/2 in. by 71/2 in.; foll. 116. Seven lines (verses) in a page.





(foll. 1-92). A metrical version of the preceding work, by Abu’l- ḳâsim b. Fîrruh b. Khalaf b. Aḥmad Ru’ainî SHÂṬIBÎ (d. A. H. 590 [=1194 CE]). It is entitled: حرز الامانی و وجه التهانی, but commonly called الشاطبیة. See Ḥ. Kh. iii., 43; Catal. Bodl. ii., p. 323; Nöldeke, Gesch. d. Qorâns, p. 337 sq.



Well written in a large hand, with vowel-points. The first two pages ornamented with red lines. Interlinear and marginal notes.

        2. Several tracts on the versions of the Koran:

Fol. 93r. The first Sûrah, with all the unusual readings, inscribed سورة الفاتحة بقراءة الشاذة; written in a large character.

Fol. 93v. A short Persian tract, beginning

بعضی از احکام ورش اگر میان کسره ورا ساکنی حایل باشد

Fol. 95v. A list of the ten readers and their disciples.

Fol. 96v. The beginning of a treatise on Orthoepy, ascribed to MUḤAMMAD SAMARḲANDÎ. It commences:

هذه رسالة سمرقندی من مصنفات

الحافظ محمد سمرقندی الاول فی تجوید فاتحة الکتاب

All the general principles of reading are exemplified from the first Sûrah, as usual. Abbreviations are used for the names of the readers, according to the system of Shâṭibî. Some confusion begins on fol. 105v., where a passage from fol. 102r. (الوقف علی الهمزة الخ) is repeated, but with a different conclusion on fol. 107r., where the MS. Abruptly ends. After some blank leaves, it recommences in the middle of fol. 108r. with the heading ذکر ذال اذ (which is also added as a catch-word to the former passage). It remains, however, doubtful whether this latter fragment belongs to the same treatise. Badly written.

Worm-eaten and stained by damp.

Bîj. Libr. A. H. 1003 [=1594-95 CE]. Catal. p. 234, Tujweed ii.



[ed note: Quick link to other manuscripts of حرز الامانی و وجه التهانی]
DOI: 10.3535/5w6-6ry-a27
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/y4t-nq9-g15
title: †Orthoceras Bruguière, 1789

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4rd-xjf-fxs
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/pcj-79l-q6e
title: Animalia

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24127002.v2
title: HAC Covariance Matrix Estimation in Quantile Regression

description: This study considers an estimator for the asymptotic variance-covariance matrix in time-series quantile regression models which is robust to the presence of heteroscedasticity and autocorrelation. When regression errors are serially correlated, the conventional quantile regression standard errors are invalid. The proposed solution is a quantile analogue of the Newey-West robust standard errors. We establish the asymptotic properties of the heteroscedasticity and autocorrelation consistent (HAC) covariance matrix estimator and provide an optimal bandwidth selection rule. The quantile sample autocorrelation coefficient is biased toward zero in finite sample which adversely affects the optimal bandwidth estimation. We propose a simple alternative estimator that effectively reduces the finite sample bias. Numerical simulations provide evidence that the proposed HAC covariance matrix estimator significantly improves the size distortion problem. To illustrate the usefulness of the proposed robust standard error, we examine the impacts of the expansion of renewable energy resources on electricity prices. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.28581083.v1
title: dataset_pred_aver_std_scc_Os_NbTaTiZr_mag6_250302.csv

description: To analyze the oxygen solubility characteristics across the Ti-Zr-Nb-Ta quaternary composition space, we have varied each element’s composition in increments of 0.05, resulting in 1771 distinct compositions. For each composition, we construct a 6×6×6 supercell and iteratively place oxygen atom at each of all possible 1296 octahedral sites within the supercell. Using our trained ML model, we predict the oxygen solution energies for more than 2 million octahedral sites. The data file encompasses the average, standard deviation values, and the average spatial correlation coefficient up to 2NN for the predicted oxygen solution energies across the 1771 distinct compositions within the entire Ti-Zr-Nb-Ta composition space.
DOI: 10.3535/2ye-8xm-d3z
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/rc5-kjh-a6z
title: Hyolithes acutus Eichwald

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.14303522.v1
title: Economic growth patterns of the MATOPIBA’S municipalities

description: Abstract: This paper aims to classify the municipalities of MATOPIBA based on a set of socioeconomic variables, mainly agricultural characteristics, as well as to decompose the growth of the sectorial GVA in the period 2010-2015, in order to identify groups of with competitive advantages and specialization. It was also used cluster and shift-share analysis based on information from IBGE, RAIS and UNDP. More specifically, the shift-share will be realized based on the groups formed by the cluster analysis, which allows a better integration of the methods. The main results show the formation of five groups, being only one of them considered incipient from the point of view of the agriculture dynamism. Shift-share results indicate that this group considered incipient was the only one to present negative VLT and did not present competitive advantage nor to be specialized in Agriculture.
DOI: 10.6084/m9.figshare.9992570.v1
title: Aligned 5-locus dataset of Inocybe sect. Rimosae s.s. and Inosperma clades

description: This is the aligned, concatenated ITS1–5.8S–ITS2–nrLSU–mtSSU dataset of <i>Inocybe </i>sect. <i>Rimosae</i> s.s. and Inosperma clades, used for molecular phylogenetic reconstruction with IQ-TREE under partitioned models. <br><br> <b>New species of <i>Inocybe</i> sect. <i>Rimosae</i> from Pakistan revealed by multi-locus phylogenetic reconstruction</b> Malka Saba, Danny Haelewaters, Donald H. Pfister, Abdul Nasir Khalid<br> <b>Abstract</b> During fungal surveys between 2012 and 2014 in pine-dominated forests of the western Himalayas in Pakistan, several collections of <i>Inocybe</i> (Agaricales, Inocybaceae) were made. These were documented based on morphological and molecular data. During this work, three new species came to light, which are here formally described as <i>Inocybe brunneoumbonata</i>, <em>I. pinophila,</em> and <em>I. triacicularis</em>. These species are part of sect. <i>Rimosae</i> s.s. and belong to or are closely related to <i>Rimosae</i> s.s. subclade A. Macro- and micro-morphological descriptions, illustrations, and molecular phylogenetic reconstructions of the studied taxa are provided. The new species are differentiated from their close relatives by basidiospore size and coloration of basidiomata. Molecular phylogenetic relationships are inferred using ITS (ITS1–5.8S–ITS2), nrLSU, and mtSSU sequence data. All three newly described taxa likely share an ectomycorrhizal association with trees in the genus <i>Pinus</i>. <b>Keywords</b> 3 new taxa, ectomycorrhizal fungi, Inocybaceae, Pakistan, phylogeny, <i>Pinus roxburghii</i>, taxonomy<br> <b></b><i></i><sub></sub><sup></sup><b></b><i></i><sub></sub><sup></sup><br>
DOI: 10.15468/dl.bpf3d3
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((3.85243 45.73638,17.29946 45.73638,17.29946 51.12074,3.85243 51.12074,3.85243 45.73638))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Panthera Oken, 1816"
 ]
}

 The dataset includes 8 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009693-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/2mg-z45-1vn
title: Mollusca

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ean-vrd-fh4
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.7639883.v1
title: Telemedicine SecBPMN2 Model

description: SecBPMN2 model enriched with security, data-minimization and fairness requirements.
DOI: 10.6084/m9.figshare.9236102.v1
title: Consistently down-regulated proteins in FLG kd organoids

description: Consistently down-regulated proteins in FLG kd organoids
DOI: 10.3535/85t-k4n-xxt
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jxy-5sm-srw
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.20033024.v1
title: Processed single-cell RNA-seq data

description: In heterogeneous head and neck cancer (HNC), subtype-specific treatment regimens are currently missing. An integrated analysis of patient HNC subtypes using single-cell sequencing and proteome profiles revealed a hallmark epithelial-mesenchymal transition (EMT) signature within the epithelial cancer-cell population. The EMT signature was evident in the invasive mesenchymal subtype and importantly, coincided with PI3K/mTOR pathway inactivation. Conversely, the signature was suppressed in epithelial cancer cells of the basal subtype which exhibits hyperactive PI3K/mTOR oncogenic signalling.
DOI: 10.6084/m9.figshare.3471767.v1
title: Crumple RNA

description: Crumple software for RNA folding
DOI: 10.3535/0kb-qq6-gex
title: †Phymatopleuridae Batten, 1956

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/jps-28e-jls
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.24183849.v2
title: Reintroducing virulent viruses to synthetic microbiomes

description: An emerging area of interest is how virulent viruses impact the assembly, structure, and function of commensal bacterial populations in the human gut. Synthetic microbiomes offer a powerful way to study these interactions <i>in vitro</i>, however, a major challenge is obtaining a representative bacteriophage population during the isolation process. Here, we demonstrate that standard colony isolation procedures reliably exclude virulent viruses from synthetic microbiomes. When the virulent virome was reintroduced to a 73-strain synthetic microbiome and cocultured in a bioreactor model of the human colon, we found that phage predation had a targeted effect on susceptible strains, but little overall impact on community structure and metabolism. Overall, the findings indicate that dilution-based isolation methods are prone to generating synthetic microbiomes heavily depleted, if not devoid, of virulent viruses, and that those viruses, if reintroduced, impact community assembly, metabolism, and prophage induction.
DOI: 10.3535/cnk-h6q-bfm
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/sz5-0rn-t2l
title: Echinodermata

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22794929.v2
title: A Hierarchical Expected Improvement Method for Bayesian Optimization

description: <b>The Expected Improvement (EI) method, proposed by Jones, Schonlau, andWelch, is a widely used Bayesian optimization method, which makes use of a fitted Gaussian process model for efficient black-box optimization. However, one key drawback of EI is that it is overly greedy in exploiting the fitted Gaussian process model for optimization, which results in suboptimal solutions even with large sample sizes. To address this, we propose a new hierarchical EI (HEI) framework, which makes use of a hierarchical Gaussian process model. HEI preserves a closed-form acquisition function, and corrects the over-greediness of EI by encouraging exploration of the optimization space. We then introduce hyperparameter estimation methods which allow HEI to mimic a fully Bayesian optimization procedure, while avoiding expensive Markov-chain Monte Carlo sampling steps. We prove the global convergence of HEI over a broad function space, and establish near-minimax convergence rates under certain prior specifications. Numerical experiments show the improvement of HEI over existing Bayesian optimization methods, for synthetic functions and a semiconductor manufacturing optimization problem. Supplementary materials for this article are available online.</b>
DOI: 10.3535/gba-yk8-jb0
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/p63-rgk-6sl
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26317678.v3
title: Dataset and scripts to perform phylogenetic reconstruction and climate modelling on the evolution and spatial distribution of melanism in vipers

description: In this work we investigate the evolutionary significance of melanism in Viperidae, under an ecological perspective by accounting for the thermal advantages provided by melanism to thermoregulation efficiency, thus testing for the effect of climate on the spatial distribution of this phenotypic trait.