cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.nrzqwa
title: Occurrence Download

description: A dataset containing 3715677 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Icterus galbula (Linnaeus, 1758)"
 ]
}

 The dataset includes 3715677 records from 224 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026536-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/z1cw-1g17
title: Diamond Lake water chemistry dataset

description: Raw data for the Diamond Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/qdqx-zj15
title: LDDsite3667 water chemistry dataset

description: Raw data for the LDDsite3667 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/d72v-em06
title: Lake Huron/Spanish River water chemistry dataset

description: Raw data for the Lake Huron/Spanish River water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.28580963
title: Molecular docking study and <i>in vitro</i> evaluation of apoptotic effect of biogenic-amine-based <i>N, O</i>-Cu(II) complexes as potent antitumor agents

description: In our attempts toward identifying biologically relevant metal compounds, two copper (II) complexes, <b>Cu1</b> and <b>Cu2,</b> have been prepared from the imines bearing tryptamine <b>1a</b>/or tyramine <b>1b</b> moieties in the structure as ligands. The X-ray crystal structure of the complex <b>Cu1</b> has been described for the first time and revealed a centrosymmetric complex possessing a CuN2O2 chromophore with square planar coordination geometry. <i>In vitro</i> evaluation of cytotoxic activity against several human cancer cells (U251, HCT116, and HeLa) and healthy MRC5 fibroblast cell line as control, has indicated a strong cytotoxic effect on the glioblastoma tumor cell line U251; even more, potent than that expressed by cisplatin. The <b>Cu2</b> showed remarkable potential to inhibit HeLa and HCT 116 cell line viability. Deeper insight into the mechanism underlying the cytotoxic effect suggested the involvement of the intrinsic pathway of apoptosis. Compound <b>Cu2</b> demonstrates more substantial pro-apoptotic effects, including more robust activation of <b>CASP3</b> and <b>BAX</b> proteins, while <b>Cu1</b> shows better interaction with <b>BCL2</b>. The interactions of the complex <b>Cu1</b> with bovine serum albumin BSA were studied to evaluate the mode of binding activities toward this biomolecule. The predicted drug-like properties and pharmacokinetics have revealed good absorption potential after oral administration.
DOI: 10.6084/m9.figshare.28580963.v1
title: Molecular docking study and <i>in vitro</i> evaluation of apoptotic effect of biogenic-amine-based <i>N, O</i>-Cu(II) complexes as potent antitumor agents

description: In our attempts toward identifying biologically relevant metal compounds, two copper (II) complexes, <b>Cu1</b> and <b>Cu2,</b> have been prepared from the imines bearing tryptamine <b>1a</b>/or tyramine <b>1b</b> moieties in the structure as ligands. The X-ray crystal structure of the complex <b>Cu1</b> has been described for the first time and revealed a centrosymmetric complex possessing a CuN2O2 chromophore with square planar coordination geometry. <i>In vitro</i> evaluation of cytotoxic activity against several human cancer cells (U251, HCT116, and HeLa) and healthy MRC5 fibroblast cell line as control, has indicated a strong cytotoxic effect on the glioblastoma tumor cell line U251; even more, potent than that expressed by cisplatin. The <b>Cu2</b> showed remarkable potential to inhibit HeLa and HCT 116 cell line viability. Deeper insight into the mechanism underlying the cytotoxic effect suggested the involvement of the intrinsic pathway of apoptosis. Compound <b>Cu2</b> demonstrates more substantial pro-apoptotic effects, including more robust activation of <b>CASP3</b> and <b>BAX</b> proteins, while <b>Cu1</b> shows better interaction with <b>BCL2</b>. The interactions of the complex <b>Cu1</b> with bovine serum albumin BSA were studied to evaluate the mode of binding activities toward this biomolecule. The predicted drug-like properties and pharmacokinetics have revealed good absorption potential after oral administration.
DOI: 10.21233/pa9g-nw15
title: Wood Lake diatom bottom sample dataset

description: Raw data for the Wood Lake diatom bottom sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.b7utdx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is 249031"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026554-250426092105405/datasets/export for details.
DOI: 10.21233/88f5-zq61
title: Lake De Smet water chemistry dataset

description: Raw data for the Lake De Smet water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.15389083
title: LIKE-A-PRO_T6.4_Projects and initiatives covering similar topics to LIKE-A-PRO_version2

description: Dataset is the second version of a spreadsheet-file with an overview of existing projects (funded by national, regional or European government) that cover similar topics to LIKE A PRO. Besides projects, also other relevant initiatives are listed. The data is sources from public data sources such as CORDIS and other databases. Listed projects and initiatives are all recent and/or ongoing. The goal of this dataset is to map the landscape of alternative protein activities and identify activities and actors that are relevant for the LIKE A PRO to connect with to explore synergies.
DOI: 10.5281/zenodo.15389084
title: LIKE-A-PRO_T6.4_Projects and initiatives covering similar topics to LIKE-A-PRO_version2

description: Dataset is the second version of a spreadsheet-file with an overview of existing projects (funded by national, regional or European government) that cover similar topics to LIKE A PRO. Besides projects, also other relevant initiatives are listed. The data is sources from public data sources such as CORDIS and other databases. Listed projects and initiatives are all recent and/or ongoing. The goal of this dataset is to map the landscape of alternative protein activities and identify activities and actors that are relevant for the LIKE A PRO to connect with to explore synergies.
DOI: 10.21233/q2et-r745
title: No Name East midden pollen dataset

description: Raw data for the No Name East midden pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/ee06-sn84
title: Echo Lake water chemistry dataset

description: Raw data for the Echo Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/ypqe-gw49
title: Bílé Karpaty 35 pollen surface sample dataset

description: Raw data for the Bílé Karpaty 35 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/4kax-2q17
title: Gob Lake water chemistry dataset

description: Raw data for the Gob Lake water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/b93s-t311
title: LRRB65 pollen surface sample dataset

description: Raw data for the LRRB65 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/cmr7-1264
title: Hall's Cave pollen surface sample dataset

description: Raw data for the Hall's Cave pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15472/ygtuip
title: Microorganismos para la obtención de agroinsumos, biomateriales y productos químicos con potencial para el control de la contaminación de suelos y aguas

description: El proyecto busca explorar de forma sistemática y sostenible la biodiversidad colombiana y la biomasa residual agroindustrial para desarrollar bioinsumos agrícolas, bioingredientes y biomateriales. Se enfoca en microorganismos nativos aislados a partir de muestras de agua recolectadas a diferentes profundidades de fuentes hídricas artificiales ubicadas en la Universidad EAFIT, Medellín, Colombia, durante el año 2022, con el fin de evaluar su potencial comercial y ambiental aplicado a la agricultura, el tratamiento de contaminantes de suelos y aguas.
DOI: 10.21233/mqg5-4735
title: North Rhody Peatland testate amoebae surface sample dataset

description: Raw data for the North Rhody Peatland testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/n545-wy60
title: Lake E511 diatom surface sample dataset

description: Raw data for the Lake E511 diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/8xqw-a996
title: Hangingstone Hill pollen dataset

description: Raw data for the Hangingstone Hill pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.26867084
title: Precise metabolic modeling in post-omics era: accomplishments and perspectives

description: Microbes have been extensively utilized for their sustainable and scalable properties in synthesizing desired bio-products. However, insufficient knowledge about intracellular metabolism has impeded further microbial applications. The genome-scale metabolic models (GEMs) play a pivotal role in facilitating a global understanding of cellular metabolic mechanisms. These models enable rational modification by exploring metabolic pathways and predicting potential targets in microorganisms, enabling precise cell regulation without experimental costs. Nonetheless, simplified GEM only considers genome information and network stoichiometry while neglecting other important bio-information, such as enzyme functions, thermodynamic properties, and kinetic parameters. Consequently, uncertainties persist particularly when predicting microbial behaviors in complex and fluctuant systems. The advent of the omics era with its massive quantification of genes, proteins, and metabolites under various conditions has led to the flourishing of multi-constrained models and updated algorithms with improved predicting power and broadened dimension. Meanwhile, machine learning (ML) has demonstrated exceptional analytical and predictive capacities when applied to training sets of biological big data. Incorporating the discriminant strength of ML with GEM facilitates mechanistic modeling efficiency and improves predictive accuracy. This paper provides an overview of research innovations in the GEM, including multi-constrained modeling, analytical approaches, and the latest applications of ML, which may contribute comprehensive knowledge toward genetic refinement, strain development, and yield enhancement for a broad range of biomolecules.
DOI: 10.13130/rd_unimi/jmksaw/yso4g2
title: 4.0_0.0_neigh.html

description: :unav
DOI: 10.13130/rd_unimi/jmksaw/s5dqde
title: 6.0_0.0_neigh.html

description: :unav
DOI: 10.13130/rd_unimi/jmksaw/ypody1
title: 10.0_0.0_distance.html

description: :unav
DOI: 10.13130/rd_unimi/jmksaw/dtytik
title: Group.Auto+Neigh.kDistance_l2_k10_max.tab

description: :unav
DOI: 10.13130/rd_unimi/jmksaw/lxs36x
title: 11.0_0.0_distance.html

description: :unav
DOI: 10.6084/m9.figshare.29175908
title: REVISED NEW CORT113176 STATS 5-28-2025

description: The ability to avoid relapse to opioid use is sexually dimorphic and challenging partly because of the co-morbid sleep disruption that occurs. The hypothalamic-pituitary adrenal (HPA) axis is thought to be a factor in this phenomenon making the glucocorticoid receptor (GR) a potential therapeutic target. We hypothesized that the chronic administration of the novel GR receptor modulator CORT113176 during chronic sleep restriction (SR) and opioid abstinence would reveal important effects on the HPA axis giving insight into mechanisms of the interaction of SR and opioid abstinence. Using our rat model of persistent sleep loss during chronic opioid abstinence, we evaluated the effect of chronic CORT113176 administration on diurnal HPA axis dynamics and adrenal function, as well as the expression of critical mRNAs in the hypothalamic PVN and pituitaries in male and female rats. Unexpectedly, we found that CORT113176 acted more like a direct agonist on plasma ACTH, and hence corticosterone secretion, but an antagonist interacting with sleep restriction (SR) on hypothalamic and pituitary gene expression. These apparently conflicting effects were sexually dimorphic. We also found surprisingly that CORT113176 suppressed the adrenal sensitivity to endogenous ACTH suggesting it was acting as an agonist on GR in the adrenal cortex. We conclude that the response of the HPA axis to CORT113176 during SR and opioid abstinence is not predictable by sex or sleep state because it can act both as an antagonist and agonist in the brain and pituitary, and an agonist in the adrenal gland in a sexually dimorphic manner.
DOI: 10.15468/dl.249b2p
title: Occurrence Download

description: A dataset containing 36817 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Streptomyces Waksman & Henrici, 1943"
 ]
}

 The dataset includes 36817 records from 429 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005915-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/btg-rnm-14s
title: Diloma nigerrimum (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7sk-vwf-c6y
title: Filopaludina javanica (von dem Busch, 1844)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qtm-a6l-1by
title: Nassarius particeps (Hedley, 1915)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0jg-fvp-zfh
title: Tritia reticulata (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/386-r84-r45
title: Conus rattus Hwass, 1792

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bk7-7h6-vdd
title: Conus patricius Hinds, 1843

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/dwb-tvf-mqv
title: Conus praecellens A. Adams, 1854

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yz8-268-by1
title: Unio tumidus Philipsson, 1788

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kg7-rqp-tzv
title: Littoraria flava (P. P. King, 1832)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qd3-9pv-bj1
title: Caryocorbula swiftiana (C. B. Adams, 1852)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8n9-re6-102
title: Cerithium atratum (Born, 1778)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c3r-ae3-w77
title: Conus quercinus [Lightfoot], 1786

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1qw-k5j-fme
title: Cerithium eburneum Bruguière, 1792

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/prf-xmf-ja0
title: Conus glans Hwass, 1792

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/210-aht-a89
title: Crassispira nigrescens (C. B. Adams, 1845)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/c7w-es4-k8n
title: Opalia australis (Lamarck, 1822)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mjp-hmb-t5l
title: Isognomon radiatus (Anton, 1838)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rbp-atw-xfe
title: Styliola subula (Quoy & Gaimard, 1827)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w1c-hg5-9lr
title: Tritia corniculum (Olivi, 1792)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4z5-3zt-zb3
title: Dendrofissurella scutellum (Gmelin, 1791)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ppv-k41-x4n
title: Tonna luteostoma (Küster, 1857)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/2d9-1cd-2sx
title: Conus loroisii Kiener, 1846

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/aqj-gzk-zpm
title: Obscurella hidalgoi (Crosse, 1864)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b9v-6mm-91p
title: Siratus formosus (G. B. Sowerby II, 1841)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zwh-cja-1cr
title: Cerithium lividulum Risso, 1826

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8rx-gx3-wlh
title: Nassarius distortus (A. Adams, 1852)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/b9j-b85-gre
title: Agagus agagus Jousseaume, 1894

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1rn-n9n-f39
title: Tridacna maxima (Röding, 1798)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/59z-096-w3z
title: Crepidula fornicata (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/722-5s6-cn7
title: Tritia mutabilis (Linnaeus, 1758)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n3x-wvn-587
title: Mastonia rubra (Hinds, 1843)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yt8-kqr-ljm
title: Neocollonia Kuroda & T. Habe, 1954

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1gf-jlj-tvh
title: Chicoreus capucinus (Lamarck, 1822)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1pq-z5c-4gg
title: Conus pulicarius Hwass, 1792

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q7k-dth-jqk
title: Conasprella perplexa (G. B. Sowerby II, 1857)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/yct-m3x-z1t
title: Conus elegans G. B. Sowerby III, 1895

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a27-lby-8l3
title: Conus muriculatus G. B. Sowerby I, 1833

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5a7-e9f-tat
title: Rhinoclavis fasciata (Bruguière, 1792)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ldn-plj-81r
title: Conus fulmen Reeve, 1843

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/19l-c4x-gz3
title: Creseis acicula (Rang, 1828)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7e5-dzf-6kq
title: Cryptopecten nux (Reeve, 1853)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/46q-2q1-29f
title: Tritia corrugata (Brocchi, 1814)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/s6p-tn7-6zy
title: Ervilia nitens (Montagu, 1808)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.