cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ffsuq3
title: Occurrence Download

description: A dataset containing 16690 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Reynoutria ×bohemica Chrtek & Chrtková, Fallopia japonica × sachalinensis, Polygonum sachalinense var. intermedium Tatew., Reynoutria ×mizushimae Yokouchi, Reynoutria xbohemica Chrtek & Chrtková, Reynoutria ×mizushimae Yokouchi ex T.Shimizu, Reynoutria ×vivax J.Schmitz & Strank, Fallopia ×bohemica (Chrtek & Chrtková) J.P.Bailey, Polygonum ×bohemicum (Chrtek & Chrtková) Zika & Jacobson, Fallopia sachalinensis var. intermedia (Tatew.) Yonek. & H.Ohashi, Reynoutria sachalinensis var. intermedia (Tatew.) Miyabe & Kudô, Fallopia xbohemica (Chrtek & Chrtková) J.P.Bailey)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000"
 ]
}

 The dataset includes 16690 records from 338 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011287-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14038701
title: InSAR coseismic deformation for the 22 January 2024, Mw 7.0, Wushi (northwestern China) earthquake

description: This dataset includes coseismic InSAR deformation for the 2024 Mw 7.0 Wushi (northwestern China) earthquake, slip models as well as Coulomb stress change distributions.
DOI: 10.5281/zenodo.14038702
title: InSAR coseismic deformation for the 22 January 2024, Mw 7.0, Wushi (northwestern China) earthquake

description: This dataset includes coseismic InSAR deformation for the 2024 Mw 7.0 Wushi (northwestern China) earthquake.
DOI: 10.5281/zenodo.14795056
title: InSAR coseismic deformation for the 22 January 2024, Mw 7.0, Wushi (northwestern China) earthquake

description: This dataset includes coseismic InSAR deformation for the 2024 Mw 7.0 Wushi (northwestern China) earthquake, slip models as well as Coulomb stress change distributions.
DOI: 10.6084/m9.figshare.28070460
title: Pathogenicity and transmissibility differences in goose-originated subgenotype 3 duck Tembusu virus in goose embryos and 3-day-old goslings

description: The Duck Tembusu virus (DTMUV) was first reported in China in 2010 and has since caused substantial economic losses in the poultry breeding industry. In the autumn of 2022, an outbreak of an infectious disease resembling DTMUV was reported in Guangdong Province, China, which caused significantly high mortality in goose embryos, and decreased egg production. This study identified one strain of the new subgenotype 3 of DTMUV, designated as DTMUV GDZQ2022, responsible for these effects. Comprehensive genomic sequencing of this strain was conducted to analyse its genetic variations. Additionally, the isolated and purified virus was inoculated into goose embryos and goslings to assess its pathogenicity. The GDZQ2022 genome displayed over 88% nucleotide homology with other DTMUV strains from China and Southeast Asia. Phylogenetic analysis of the E gene classified GDZQ2022 within the subgenotype 3 of DTMUV. Pathogenicity experiments on goose embryos and goslings showed that the GDZQ2022 strain induced typical clinical signs of DTMUV, particularly severe neurological manifestations. Although GDZQ2022 exhibited high virulence in goose embryos, its virulence in goslings was minimal, resulting in a low mortality rate. Pathological examinations detected significant histological lesions in the brains, livers, and spleens of the infected goslings. In conclusion, this study presents the first evidence of a novel DTMUV strain proliferating among young geese in China, underscoring the genetic diversity of DTMUV and contributing to our understanding of the pathogenicity of the subgenotype 3 Tembusu virus in goose embryos and goslings. <b>RESEARCH HIGHLIGHTS</b>Pathogenicity of subgenotype 3 duck Tembusu virus in goose embryos and goslings was shown for the first time.DTMUV GDZQ2022 strain is highly pathogenic in goose embryos.The virulence of the DTMUV GDZQ2022 strain in goslings is relatively mild.Infected goslings exhibit typical clinical manifestations, with a low mortality rate. Pathogenicity of subgenotype 3 duck Tembusu virus in goose embryos and goslings was shown for the first time. DTMUV GDZQ2022 strain is highly pathogenic in goose embryos. The virulence of the DTMUV GDZQ2022 strain in goslings is relatively mild. Infected goslings exhibit typical clinical manifestations, with a low mortality rate.
DOI: 10.6084/m9.figshare.28070460.v1
title: Pathogenicity and transmissibility differences in goose-originated subgenotype 3 duck Tembusu virus in goose embryos and 3-day-old goslings

description: The Duck Tembusu virus (DTMUV) was first reported in China in 2010 and has since caused substantial economic losses in the poultry breeding industry. In the autumn of 2022, an outbreak of an infectious disease resembling DTMUV was reported in Guangdong Province, China, which caused significantly high mortality in goose embryos, and decreased egg production. This study identified one strain of the new subgenotype 3 of DTMUV, designated as DTMUV GDZQ2022, responsible for these effects. Comprehensive genomic sequencing of this strain was conducted to analyse its genetic variations. Additionally, the isolated and purified virus was inoculated into goose embryos and goslings to assess its pathogenicity. The GDZQ2022 genome displayed over 88% nucleotide homology with other DTMUV strains from China and Southeast Asia. Phylogenetic analysis of the E gene classified GDZQ2022 within the subgenotype 3 of DTMUV. Pathogenicity experiments on goose embryos and goslings showed that the GDZQ2022 strain induced typical clinical signs of DTMUV, particularly severe neurological manifestations. Although GDZQ2022 exhibited high virulence in goose embryos, its virulence in goslings was minimal, resulting in a low mortality rate. Pathological examinations detected significant histological lesions in the brains, livers, and spleens of the infected goslings. In conclusion, this study presents the first evidence of a novel DTMUV strain proliferating among young geese in China, underscoring the genetic diversity of DTMUV and contributing to our understanding of the pathogenicity of the subgenotype 3 Tembusu virus in goose embryos and goslings. <b>RESEARCH HIGHLIGHTS</b>Pathogenicity of subgenotype 3 duck Tembusu virus in goose embryos and goslings was shown for the first time.DTMUV GDZQ2022 strain is highly pathogenic in goose embryos.The virulence of the DTMUV GDZQ2022 strain in goslings is relatively mild.Infected goslings exhibit typical clinical manifestations, with a low mortality rate. Pathogenicity of subgenotype 3 duck Tembusu virus in goose embryos and goslings was shown for the first time. DTMUV GDZQ2022 strain is highly pathogenic in goose embryos. The virulence of the DTMUV GDZQ2022 strain in goslings is relatively mild. Infected goslings exhibit typical clinical manifestations, with a low mortality rate.
DOI: 10.6084/m9.figshare.27003660
title: Longitudinal study of avian pathogenic <i>Escherichia coli</i> (APEC) serogroups associated with disease in Georgia poultry using molecular serology and virulence gene analysis

description: Avian pathogenic <i>Escherichia coli</i> (APEC) is a significant cause of morbidity, mortality, and production loss to the poultry industry worldwide. Here, we characterized 569 <i>E. coli</i> isolates from avian-diagnosed colibacillosis cases from the state of Georgia, USA. In total, 339 isolates were assigned into 32 serogroups with the majority classifying as O78, O2, O25, O8, O1, O86, O18, and O15. Serogroup O25 was found to link with broilers, while broiler breeders were more often associated with serogroup O1 and pet/ hobby birds with serogroup O8. In addition, some serogroups (O1) were more prevalent in the summer and fall. Analysis for virulence-associated genes (VAGs) found 23.20% of isolates did not harbour any genes linked with the APEC pathotype, while ColV plasmid-associated genes (<i>iroN</i>, <i>ompT</i>, <i>hlyF</i>, <i>iss</i>, and <i>aerJ</i>) were frequently detected among most isolates (with 80–96% prevalence) and some of these genes were linked with serogroup. Phylogenetic analysis, classified isolates into phylogenetic groups B2 (34%), F (19%), A (15%), and G (9%). The phylogenetic group B2 isolates also harboured the highest number of VAGs. This study highlights that the current APEC-causing disease in birds in the State of Georgia has identified several emerging serogroups possessing several VAGs that could potentially lead to challenges in colibacillosis control. <b>RESEARCH HIGHLIGHTS</b>Several emerging APEC serogroups were observed in Georgia poultry populations.An association between APEC serogroups and bird type was observed.The prevalence of different APEC serogroups was influenced by season.A multiplex PCR assay targeting common serogroups of APEC in Georgia poultry was developed. Several emerging APEC serogroups were observed in Georgia poultry populations. An association between APEC serogroups and bird type was observed. The prevalence of different APEC serogroups was influenced by season. A multiplex PCR assay targeting common serogroups of APEC in Georgia poultry was developed.
DOI: 10.6084/m9.figshare.27003660.v2
title: Longitudinal study of avian pathogenic <i>Escherichia coli</i> (APEC) serogroups associated with disease in Georgia poultry using molecular serology and virulence gene analysis

description: Avian pathogenic <i>Escherichia coli</i> (APEC) is a significant cause of morbidity, mortality, and production loss to the poultry industry worldwide. Here, we characterized 569 <i>E. coli</i> isolates from avian-diagnosed colibacillosis cases from the state of Georgia, USA. In total, 339 isolates were assigned into 32 serogroups with the majority classifying as O78, O2, O25, O8, O1, O86, O18, and O15. Serogroup O25 was found to link with broilers, while broiler breeders were more often associated with serogroup O1 and pet/ hobby birds with serogroup O8. In addition, some serogroups (O1) were more prevalent in the summer and fall. Analysis for virulence-associated genes (VAGs) found 23.20% of isolates did not harbour any genes linked with the APEC pathotype, while ColV plasmid-associated genes (<i>iroN</i>, <i>ompT</i>, <i>hlyF</i>, <i>iss</i>, and <i>aerJ</i>) were frequently detected among most isolates (with 80–96% prevalence) and some of these genes were linked with serogroup. Phylogenetic analysis, classified isolates into phylogenetic groups B2 (34%), F (19%), A (15%), and G (9%). The phylogenetic group B2 isolates also harboured the highest number of VAGs. This study highlights that the current APEC-causing disease in birds in the State of Georgia has identified several emerging serogroups possessing several VAGs that could potentially lead to challenges in colibacillosis control. <b>RESEARCH HIGHLIGHTS</b>Several emerging APEC serogroups were observed in Georgia poultry populations.An association between APEC serogroups and bird type was observed.The prevalence of different APEC serogroups was influenced by season.A multiplex PCR assay targeting common serogroups of APEC in Georgia poultry was developed. Several emerging APEC serogroups were observed in Georgia poultry populations. An association between APEC serogroups and bird type was observed. The prevalence of different APEC serogroups was influenced by season. A multiplex PCR assay targeting common serogroups of APEC in Georgia poultry was developed.
DOI: 10.6084/m9.figshare.27003660.v1
title: Longitudinal Study of Avian Pathogenic <i>Escherichia coli</i> (APEC) serogroups associated with disease in Georgia poultry using molecular serology and virulence gene analysis.

description: Avian pathogenic <i>Escherichia coli</i> (APEC) is a significant cause of morbidity, mortality, and production loss to the poultry industry worldwide. Here, we characterized 569 <i>E. coli</i> isolates from avian-diagnosed colibacillosis cases from the state of Georgia, USA. A total of 339 isolates were assigned into 32 serogroups with the majority classifying as O78, O2, O25, O8, O1, O86, O18, and O15. Serogroup O25 was found to link with broilers, while broiler breeders were more often associated with serogroup O1 and pet/ hobby birds with serogroup O8. In addition, some serogroups (O1) were more prevalent in the Summer and Fall. Analysis for virulence-associated genes (VAGs) found 23.20% of isolates did not harbor any genes linked with the APEC pathotype, while ColV plasmid-associated genes (<i>iroN</i>, <i>ompT</i>, <i>hlyF</i>, <i>iss</i>, and <i>aerJ,</i>) were frequently detected among most isolates (with 80 to 96% prevalence) and some of these genes were linked with serogroup. Phylogenetic analysis, classified isolates into phylogenetic groups B2 (27%), G (21%), F (15%), and A (11%). The phylogenetic group B2 isolates also harbored the highest number of VAGs. This study highlights that the current APEC-causing disease in birds in the State of Georgia has identified several emerging serogroups possessing several VAGs that could potentially lead to challenges in colibacillosis control.
DOI: 10.6084/m9.figshare.27194429
title: Continuing evolution of H5N1 highly pathogenic avian influenza viruses of clade 2.3.2.1a G2 genotype in domestic poultry of Bangladesh during 2018–2021

description: We characterized 15 H5N1 HPAI viruses from different small- and medium-scale poultry flocks across Bangladesh during 2018–2021 based on their complete genome sequences. The antigenic relatedness of H5N1 HPAI viruses from different timepoints was analysed. During 2020–2021, 42.11% of the flocks tested positive for at least one of the respiratory infections, with 15.79% showing influenza A virus, of which 8.77% tested positive for HPAIV H5N1. Co-infections with two to four pathogens were detected in 15.8% of flocks. Phylogeny and gene constellation analyses based on complete genome sequences of 15 HPAI viruses revealed the continuing circulation of H5 clade 2.3.2.1a genotype G2 viruses. In the HA protein of the study isolates, functionally meaningful mutations caused the loss of an N-linked glycosylation site (T156A), a modified antigenic site A (S141P), and a mutation in the receptor binding pocket (E193R/K). Consequently, antigenic analysis revealed a significant loss of cross-reactivity between viruses from different host species and periods. Most viruses displayed oseltamivir resistance markers at positions V96, I97, S227, and N275 (N1 numbering) of the NA protein. In addition, for the PB2, M1, and NS1 proteins, significant mutations were noticed that have been associated with polymerase activity and increased virulence for mammals in all study isolates. These results highlight the need for intensified genomic surveillance of HPAI circulating in poultry in Bangladesh and for establishing appropriate control measures to decrease the circulation of these viruses in poultry in the country.
DOI: 10.6084/m9.figshare.27194429.v1
title: Continuing evolution of H5N1 highly pathogenic avian influenza viruses of clade 2.3.2.1a G2 genotype in domestic poultry of Bangladesh during 2018–2021

description: We characterized 15 H5N1 HPAI viruses from different small- and medium-scale poultry flocks across Bangladesh during 2018–2021 based on their complete genome sequences. The antigenic relatedness of H5N1 HPAI viruses from different timepoints was analysed. During 2020–2021, 42.11% of the flocks tested positive for at least one of the respiratory infections, with 15.79% showing influenza A virus, of which 8.77% tested positive for HPAIV H5N1. Co-infections with two to four pathogens were detected in 15.8% of flocks. Phylogeny and gene constellation analyses based on complete genome sequences of 15 HPAI viruses revealed the continuing circulation of H5 clade 2.3.2.1a genotype G2 viruses. In the HA protein of the study isolates, functionally meaningful mutations caused the loss of an N-linked glycosylation site (T156A), a modified antigenic site A (S141P), and a mutation in the receptor binding pocket (E193R/K). Consequently, antigenic analysis revealed a significant loss of cross-reactivity between viruses from different host species and periods. Most viruses displayed oseltamivir resistance markers at positions V96, I97, S227, and N275 (N1 numbering) of the NA protein. In addition, for the PB2, M1, and NS1 proteins, significant mutations were noticed that have been associated with polymerase activity and increased virulence for mammals in all study isolates. These results highlight the need for intensified genomic surveillance of HPAI circulating in poultry in Bangladesh and for establishing appropriate control measures to decrease the circulation of these viruses in poultry in the country.
DOI: 10.6084/m9.figshare.24787510
title: A fatal case of polyoxyethylated-<i>p</i>-nonylphenol surfactant (Wetter 600) ingestion

description: A fatal case of polyoxyethylated-<i>p</i>-nonylphenol surfactant (Wetter 600) ingestion
DOI: 10.6084/m9.figshare.24787510.v1
title: A fatal case of polyoxyethylated-<i>p</i>-nonylphenol surfactant (Wetter 600) ingestion

description: A fatal case of polyoxyethylated-<i>p</i>-nonylphenol surfactant (Wetter 600) ingestion
DOI: 10.15468/dl.jcdqyp
title: Occurrence Download

description: A dataset containing 4878218 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Guatemala"
 ]
}

 The dataset includes 4878218 records from 1308 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011284-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c95e43
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.396451 -33.435987, 148.396451 -33.440479, 148.403189 -33.440479, 148.403189 -33.442725, 148.412172 -33.442725, 148.412172 -33.440479, 148.40768 -33.440479, 148.40768 -33.435987, 148.396451 -33.435987))"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058367-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17631/rd-2024-0016-ddat
title: S3 buddying for PGTI students: evaluation of pilot
DOI: 10.15468/dl.ffxm46
title: Occurrence Download

description: A dataset containing 267 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Guatemala",
 "TaxonKey is Imantodes cenchoa (Linnaeus, 1758)"
 ]
}

 The dataset includes 267 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058368-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vepmcr
title: Occurrence Download

description: A dataset containing 1362 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Neochelon falcipinnis (Valenciennes, 1836)"
 ]
}

 The dataset includes 1362 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058369-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ne8bc9
title: Occurrence Download

description: A dataset containing 1115196 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Charadrius hiaticula Linnaeus, 1758",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 1115196 records from 614 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058358-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a4v7vv
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.414418 -33.435987, 148.414418 -33.440479, 148.418909 -33.440479, 148.418909 -33.435987, 148.414418 -33.435987))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058371-240626123714530/datasets/export for details.
DOI: 10.5281/zenodo.13286028
title: IMPACT OF WOMEN'S EMPLOYMENT PROBLEM ON COMMUNITY LIFE
DOI: 10.5281/zenodo.13286029
title: IMPACT OF WOMEN'S EMPLOYMENT PROBLEM ON COMMUNITY LIFE
DOI: 10.5281/zenodo.13285641
title: Distal Femoral Landmarks from Skeletons with Total Knee Arthroplasty

description: This dataset contains raw 3D landmark coordinates for the articular surface of the distal femur. The sample consists of 43 modern adult human skeletons from the University of Tennessee Donated Skeletal Collection. 12 of the skeletons received unilateral total knee arthroplasty (TKA) during life due to osteoarthritis; landmarks for these individuals were taken on the non-replaced (healthy) antimere. The remaining 31 individuals serve as controls, having received no knee replacement during life and showing no signs of joint degenerative disease.
DOI: 10.5281/zenodo.13285642
title: Distal Femoral Landmarks from Skeletons with Total Knee Arthroplasty

description: This dataset contains raw 3D landmark coordinates for the articular surface of the distal femur. The sample consists of 43 modern adult human skeletons from the University of Tennessee Donated Skeletal Collection. 12 of the skeletons received unilateral total knee arthroplasty (TKA) during life due to osteoarthritis; landmarks for these individuals were taken on the non-replaced (healthy) antimere. The remaining 31 individuals serve as controls, having received no knee replacement during life and showing no signs of joint degenerative disease.
DOI: 10.5517/ccdc.csd.cc2h02xj
title: CCDC 2293997: Experimental Crystal Structure Determination

description: Related Article: Devendra Mayurdhwaj Sanke, Jasmine Bezboruah, Ajay Vinayakrao Munde, Sanjio S. Zade|2024|Energy Fuels|38|10203|doi:10.1021/acs.energyfuels.4c00601
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jdrj7
title: CCDC 2335959: Experimental Crystal Structure Determination

description: Related Article: Nida Shahid, Amrendra K. Singh|2024|Dalton Trans.|53|12662|doi:10.1039/D4DT01200C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jgy98
title: CCDC 2338060: Experimental Crystal Structure Determination

description: Related Article: Roman O. Pankov, Ignatii R. Tarabrin, Alexandra G. Son, Mikhail E. Minyaev, Darya O. Prima, Valentine P. Ananikov|2024|Dalton Trans.|53|12503|doi:10.1039/D4DT01304B
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.