cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7362211
title: Benchmark denoising strategies on fMRIPrep output - input data

description: All inputs required to build the figures and statistics in the jupyter book.<br> Including: summary statistics for the figures and average connectomes per dataset.<br> Untar the file and put it under the `inputs/` directory. Repository: https://github.com/SIMEXP/fmriprep-denoise-benchmark Book: https://simexp.github.io/fmriprep-denoise-benchmark/
DOI: 10.5281/zenodo.7764979
title: Benchmark denoising strategies on fMRIPrep output - input data

description: All inputs required to build the figures and statistics in the jupyter book.<br> Including: summary statistics for the figures and average connectomes per dataset.<br> Untar the file and put it under the `inputs/` directory. Repository: https://github.com/SIMEXP/fmriprep-denoise-benchmark Book: https://simexp.github.io/fmriprep-denoise-benchmark/
DOI: 10.6084/m9.figshare.22253308
title: Single-neuronal predictions of others’ beliefs in humans

description: Preprocessed data and codes in order to reproduce the main results, figures, and panels in the paper.
DOI: 10.6084/m9.figshare.22253308.v1
title: Single-neuronal predictions of others’ beliefs in humans

description: Preprocessed data and codes in order to reproduce the main results, figures, and panels in the paper.
DOI: 10.17632/pxtt327h65.1
title: Downregulation of DNA methylation enhances differentiation of THP-1 cells and induces M1 polarization of differentiated macrophages

description: Original data related to Downregulation of DNA methylation enhances differentiation of THP-1 cells and induces M1 polarization of differentiated macrophages
DOI: 10.17632/w655db7rj9.1
title: Using the AKAR3-EV biosensor to assess Sch9- & PKA-signalling in budding yeast

description: All data and scripts to produce the figures in "Using the AKAR3-EV biosensor to assess Sch9- & PKA-signalling in budding yeast".
DOI: 10.17632/w655db7rj9.2
title: Using the AKAR3-EV biosensor to assess Sch9- & PKA-signalling in budding yeast

description: All data and scripts to produce the figures in "Using the AKAR3-EV biosensor to assess Sch9- & PKA-signalling in budding yeast".
DOI: 10.17632/6f73jz6jx8.2
title: AAfrag 2.01: interpolation routines for Monte Carlo results on secondary production including light antinuclei in hadronic interactions

description: Light antinuclei, like antideuteron and antihelium-3, are ideal probes for new, exotic physics because their astrophysical backgrounds are suppressed at low energies. In order to exploit fully the inherent discovery potential of light antinuclei, a reliable description of their production cross sections in cosmic ray interactions is crucial. We provide therefore the cross sections of antideuteron and antihelium-3 production in pp, pHe, Hep, HeHe, p¯p and p¯He collisions at energies relevant for secondary production in the Milky Way, in a tabulated form which is convinient to use. These predictions are based on QGSJET-II-04m and the state of the art coalescence model WiFunC, which evaluates the coalesence probability on an event-by-event basis, including both momentum correlations and the dependence on the emission volume. In addition, we comment on the importance of a Monte Carlo description of the antideuteron production and on the use of event generators in general. In particular, we discuss the effect of two-particle momentum correlations provided by Monte Carlo event generators on antinuclei production.
DOI: 10.17632/38rfykj6bp.1
title: List of metabolites from rat myocardium tissues in both MTX treated and untreated conditions

description: Cardiotoxicity is a well-established adverse effect of several drugs across multiple therapeutic indications. It is particularly prevalent following anticancer therapy. In order to evaluate the changes in metabolism associated with cardiotoxicity, we treated Wistar rats with a single high dose of methotrexate, and after five days, the animals were sacrificed. We then analyzed the cardiotoxicity parameters in serum and cardiac tissue with the goal of identifying a metabolic signature of cardiotoxicity using discovery-based metabolomics. 

The results showed a total of 95 metabolites that were found to be significantly (p < 0.05) modulated: either up- or downregulated in the HDMTX-treated group when compared with the control group. Based on these metabolites, it was found via integrated pathway analysis that a majority of the metabolites were associated with many important cardiac tissue metabolic pathways, such as the malate aspartate shuttle, taurine and hypotaurine metabolism, betaine metabolism, spermidine and spermine biosynthesis, and homocysteine degradation. Among them, L-arginine, homocysteine, and betaine were significantly upregulated, suggesting their role in cardiac tissue injury. The metabolic signature of toxicity may offer a novel approach to the prediction of elevated betaine levels as the novel biomarker for cardiotoxic potential due to HDMTX cardiac toxicity.
DOI: 10.17632/y68fw3pd72.1
title: O.latTBT-bp1_research

description: Rawdata1
This data is fluorescence intensity of binding or competitive binding assay.
Sheets show fluorescence shifts of interaction between recombinant O.latTBT-bp1 and chemicals.

Rawdata2
This data is counted number of papillary processes in ethinylestradiol exposure test.
To evaluate estrogenic effects for male medaka, we described our data separately for males and females.
DOI: 10.17632/y68fw3pd72.2
title: O.latTBT-bp1_research

description: Rawdata1
This data is fluorescence intensity of binding or competitive binding assay.
Sheets show fluorescence shifts of interaction between recombinant O.latTBT-bp1 and chemicals.

Rawdata2
This data is counted number of papillary processes in ethinylestradiol exposure test.
To evaluate estrogenic effects for male medaka, we described our data separately for males and females.

DMYchcheck.png
These are photographs of electrophoresis gel to determine genotypic sex.
DOI: 10.17632/5ddb539jsz.1
title: Drug-induced alopecia areata

description: Alopecia areata (AA) is a chronic autoimmune disease that causes non-scarring alopecia. While most cases present as discrete patches of alopecia, some patients may develop total scalp hair loss (alopecia totalis) or total body hair loss (alopecia universalis). Most cases of AA are idiopathic, but several triggers including medications, have been reported in the literature. The objective of this study is to provide a list of drugs that have been associated with AA and assess the management of drug-induced AA and resulting outcomes. Below is a document listing our search strategy and another document showing the medications thought to induce AA.
DOI: 10.17632/5ddb539jsz.2
title: Drug-induced alopecia areata

description: Alopecia areata (AA) is a chronic autoimmune disease that causes non-scarring alopecia. While most cases present as discrete patches of alopecia, some patients may develop total scalp hair loss (alopecia totalis) or total body hair loss (alopecia universalis). Most cases of AA are idiopathic, but several triggers including medications, have been reported in the literature. The objective of this study is to provide a list of drugs that have been associated with AA and assess the management of drug-induced AA and resulting outcomes. Below is a document listing our search strategy and another document showing the medications thought to induce AA.
DOI: 10.17632/5ddb539jsz.3
title: Drug-induced alopecia areata

description: Alopecia areata (AA) is a chronic autoimmune disease that causes non-scarring alopecia. While most cases present as discrete patches of alopecia, some patients may develop total scalp hair loss (alopecia totalis) or total body hair loss (alopecia universalis). Most cases of AA are idiopathic, but several triggers including medications, have been reported in the literature. The objective of this study is to provide a list of drugs that have been associated with AA and assess the management of drug-induced AA and resulting outcomes. Below is a document listing our search strategy and another document showing the medications thought to induce AA.
DOI: 10.17632/tttrffnjtd.1
title: 5 point likert scale attitudinal data regarding an e-gov IS

description: A 5 point Likert scale attitudinal data regarding an e-gov IS is a type of survey response that measures an individual's attitude towards an electronic government information system (e-gov IS) on a scale of 1 to 5. The Likert scale typically ranges from strongly agree (5) to strongly disagree (1), with the midpoint indicating a neutral stance. The survey has been used to collect data on various aspects of the e-gov IS, such as system quality, information quality, service quality, economic quality, perceived usefulness, user satisfaction and net perceived benefits. The data collected through the Likert scale has been analyzed to understand the respondents' perceptions of the e-gov IS and to identify the interconnections.
DOI: 10.17632/znzb836tkm.1
title: Large-scale field tests on performance of geogrid-reinforced and pile-supported embankments over soft soil: a case study of Wuhan international motor-racing circuit

description: data for submission of Large-scale field tests on performance of geogrid-reinforced and pile-supported embankments over soft soil: a case study of Wuhan international motor-racing circuit
DOI: 10.5519/qd.4xvxv5gc
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (42 records)
DOI: 10.17632/6fnbvcnj4t.1
title: datasets describing effect of isometric and stretching exercises on neck pain

description: Research   Hypothesis
H1: There would be a lack of IT employees' knowledge about the importance of good neck posture, isometric and stretching exercises. 
H2: Isometric and stretching exercises would be a good effect on improving neck pain















Background: Neck pain is one of the most common musculoskeletal complaints among men and women specifically those working on a computer. Aim   to evaluate the effect of an educational program about isometric and stretching exercises on neck pain among Information Technology employees at new Assuit city. Method and material: Quasi-experimental research design and a single population proportion formula to calculate sample size required for the study through using Open Epi, Version 3. Total final size 118 employee and the program was implemented on (73) employees having neck pain according exclusion criteria. Period of collecting data was from the mid of April 2021 to mid of December 2021. Three tools were used, a tool I: A structured questionnaire which consisted of three parts: 1st part: socio-demographic data, 2nd part: assessment of the nature of the work, and 3rd part: assessment of knowledge of employees. Tool (II): Neck Pain Questionnaire(NPQ) was used to evaluate the degree of neck pain and functional disability, tool (III): observational checklist. Data entry and data analysis were done using SPSS version 22 (Statistical Package for Social Science) (SPSS Inc., Chicago, II., USA). Data were presented as number, percentage, mean, standard deviation, median and range. Chi-square test was used to compare qualitative variables. In case of parametric data, Paired samples t-test was done to compare quantitative data between pre-test and post-test. Pearson correlation was done to measure correlation between quantitative variables. While in case of non-parametric data, Wilcoxon Signed Rank Test was done to compare quantitative variables between pre-test and post-test. P-value considered statistically significant when P < 0.05.
DOI: 10.5281/zenodo.7767636
title: Data in support of "Bounding the localized to ductile transition in porous rocks: what implications for geo-reservoirs?" by GG. Meyer and M. Violay

description: This repository contains the mechanical data from three triaxial experiments on Volvic trachyandesite in support of the publication "Bounding the localized to ductile transition in porous rocks: what implications for geo-reservoirs?" by GG Meyer and M Violay. The three files correspond to the three different samples as follow: VB21 “dry_slow”. Strain rate of 10-5s-1; no pore fluid<br> Sample length: 0.0770m<br> Sample diameter: 0.0382m VB22 “dry_fast”. Strain rate of 10-4s-1; no pore fluid<br> Sample length: 0.0709m<br> Sample diameter: 0.0372m VB23 “wet_slow”. Strain rate of 10-5s-1; water as pore fluid<br> Sample length: 0.0813m<br> Sample diameter: 0.0381m All files contain 5 columns:<br> Time in s<br> Average strain recorded by LVDT (adimensional)<br> Average axial strain recorded by strain gauges (adimensional)<br> Confining pressure in bar<br> Axial stress in Pa
DOI: 10.5281/zenodo.7767635
title: Data in support of "Bounding the localized to ductile transition in porous rocks: what implications for geo-reservoirs?" by GG. Meyer and M. Violay

description: This repository contains the mechanical data from three triaxial experiments on Volvic trachyandesite in support of the publication "Bounding the localized to ductile transition in porous rocks: what implications for geo-reservoirs?" by GG Meyer and M Violay. The three files correspond to the three different samples as follow: VB21 “dry_slow”. Strain rate of 10-5s-1; no pore fluid<br> Sample length: 0.0770m<br> Sample diameter: 0.0382m VB22 “dry_fast”. Strain rate of 10-4s-1; no pore fluid<br> Sample length: 0.0709m<br> Sample diameter: 0.0372m VB23 “wet_slow”. Strain rate of 10-5s-1; water as pore fluid<br> Sample length: 0.0813m<br> Sample diameter: 0.0381m All files contain 5 columns:<br> Time in s<br> Average strain recorded by LVDT (adimensional)<br> Average axial strain recorded by strain gauges (adimensional)<br> Confining pressure in bar<br> Axial stress in Pa
DOI: 10.5519/qd.dkgwtwqe
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2 records)
DOI: 10.17632/c9jzbmwxsz.1
title: Digital Twin of an Absorption Chiller for Solar Cooling - Validation data

description: This data has:
- Three days of operation of a double-effect absorption chiller model BROAD BZH15 with 174 kWh cooling capacity  (file Validation_AE_AC.mat),
- Four Adaptive Neuro-Fuzzy Inference System models for the absorption chiller subsystems (files FIS_HTG_1, FIS_HTG_2, FIS_HTG_3, FIS_HTG_4),
- Matlab code that simulates the models' validation accordingly to CITE ARTICLE (file main.m),
- Matlab code that creates the validation figures and results tables accordingly to CITE ARTICLE (file index_plots).
DOI: 10.17632/c9jzbmwxsz.2
title: Digital Twin of an Absorption Chiller for Solar Cooling - Validation data

description: This data has:
- Three days of operation of a double-effect absorption chiller model BROAD BZH15 with 174 kWh cooling capacity  (file Validation_AE_AC.mat),
- Four Adaptive Neuro-Fuzzy Inference System models for the absorption chiller subsystems (files FIS_HTG_1, FIS_HTG_2, FIS_HTG_3, FIS_HTG_4),
- Matlab code that simulates the models' validation accordingly to the related link below (file main.m),
- Matlab code that creates the validation figures and results tables accordingly to the related link below (file index_plots).
DOI: 10.17632/9h29shn78r.1
title: Anti-TNF α Inhibitors vs. Ustekinumab: Which Treatment Puts Psoriasis Patients at Lower Risk of Uveitis?

description: Supplemental Table 1. Baseline clinical characteristics of the study population
DOI: 10.17632/8j6vg4d457.1
title: Insure or Unsure? The Role of Negative and Positive Basis Risk in Weather Index Insurance Uptake in Kenya

description: This repository holds publicly available weather data which has been extracted from .tiff and NetCDF to Stata format at points over Kenya. The original source of the rainfall data is:
http://www.climatedatalibrary.cl/SOURCES/.NOAA/.NCEP/.CPC/.FEWS/.Africa/.DAILY/.ARC2/.daily/index.html?Set-Language=en

The original source of the temperature data is:
https://www.rccap.org/data/item/592e5bcf82f97

It also holds the replication files for the paper titled: Insure or Unsure? The Role of Negative and Positive Basis Risk in Weather Index Insurance Uptake in Kenya, authored by S J Vosper and F Cecchi. The remaining data files to run these replication files need to be requested from the authors as this contains proprietary data of the insurance provider. This requires the appropriate permission requests to be made. This can be done by contacting Francesco Cecchi on: francesco.cecchi@wur.nl
DOI: 10.17632/r5h4s6zk6h.1
title: Two-dimensional temperature mapping for a moving agar-based tissue-mimicking phantom using diagnostic ultrasound

description: Here the radio frequency signals (rf data) refer to the backscattered echo signals originated in a tissue-mimicking phantom. When a diagnostic ultrasound pulse propagates in a tissue medium, it is scattered by numerous scatterers. The transit time of the backscattered echoes is temperature dependent since the echoes gain a local change in the speed of sound due to any temperature change in the medium. Moreover, the thermal expansion of the propagating medium causes a physical shift in the location of the scatterers leading to a time shift of the successive rf signals. In a echo shift method a linear relationship can be established between the temperature change and the echo shift for a temperature rise up to 45 °C  if non-linear effects are neglected. Thus, determining the echo shift of the successive rf signals we can measure the local temperature change in a non-invasive way for an object under thermal therapy.
DOI: 10.17632/4t8829gj9t.1
title: Zaitsev et al, C-loss data in microcosms

description: Data on CO2 emission and carbon loss in a three-month-long microcosm experiment with 21 different species of macrofauna (each treatment replicated four times) belonging to 13 families to test their ability to degrade wheat straw. Simultaneously CO2 release from the microcosms was measured.
DOI: 10.17632/9dpmj77y4f.1
title: Taste coding of heavy metal ion-induced avoidance in Drosophila. 

description: Raw and analyzed data
DOI: 10.17632/hfwvd8z8xm.1
title: Dataset of changes in viscosity of Escherichia albertii cultures during storage at room temperature

description:    Escherichia albertii was named in 2003 as a new species in the genus Escherichia and is known as a causative agent of diarrhea. Although the biochemical characteristics of E. albertii are not specific for differentiating it from other species, it is now possible to identify the species by PCR targeting specific genes. Among about 100 strains of E. albertii at our institution, only one strain was viscous, but we examined the change in viscosity because some of the strains acquired viscosity during storage. The target strain was the strain with viscosity change, and the controls were the viscous strain, E. albertii JCM strain, and E. coli ATCC strain. Biochemical properties, drug susceptibility, and string tests were performed under various conditions. No significant differences were observed in biochemical properties and drug susceptibility tests. In the string test of the viscous strain, the viscous colonies did not show any significant change in viscosity with passaging, especially the non-viscous colonies did not show any change in viscosity. Similarly, there was no change in the viscosity of either the viscous or the non-viscous colonies by passaging in the strain with altered viscosity. Neither the length of the storage period nor the casitone concentration affected the viscosity change. The change in viscosity was related to the storage of the strain at room temperature, suggesting that the process from the clinical specimen to the storage after isolation may have affected the change in viscosity.
DOI: 10.17632/hfwvd8z8xm.2
title: Dataset of changes in viscosity of Escherichia albertii cultures during storage at room temperature

description:    Escherichia albertii was named in 2003 as a new species in the genus Escherichia and is known as a causative agent of diarrhea. Although the biochemical characteristics of E. albertii are not specific for differentiating it from other species, it is now possible to identify the species by PCR targeting specific genes. Among about 100 strains of E. albertii at our institution, only one strain was viscous, but we examined the change in viscosity because some of the strains acquired viscosity during storage. The target strain was the strain with viscosity change, and the controls were the viscous strain, E. albertii JCM strain, and E. coli ATCC strain. Biochemical properties, drug susceptibility, and string tests were performed under various conditions. No significant differences were observed in biochemical properties and drug susceptibility tests. In the string test of the viscous strain, the viscous colonies did not show any significant change in viscosity with passaging, especially the non-viscous colonies did not show any change in viscosity. Similarly, there was no change in the viscosity of either the viscous or the non-viscous colonies by passaging in the strain with altered viscosity. Neither the length of the storage period nor the casitone concentration affected the viscosity change. The change in viscosity was related to the storage of the strain at room temperature, suggesting that the process from the clinical specimen to the storage after isolation may have affected the change in viscosity.
DOI: 10.6084/m9.figshare.22298935
title: BGCs_prediction_selectedStrains

description: BGCs prediction by antiSMASH, PRISM and DeepBGC
DOI: 10.6084/m9.figshare.22298935.v4
title: BGCs_prediction_selectedStrains

description: BGCs prediction by antiSMASH, PRISM and DeepBGC
DOI: 10.6084/m9.figshare.22298935.v3
title: BGCs_prediction_selectedStrains

description: BGCs prediction by antiSMASH, PRISM and DeepBGC
DOI: 10.6084/m9.figshare.22312192
title: Pain_research_workforce_survey_responses.xlsx

description: The de-identified responses from a survey on pain clinical researcher workforce challenges and opportunities administered by the Office of Pain Policy and Planning (OPPP) at the National Institute of Neurological Disorders and Stroke (NINDS) of the National Insitutes of Health (NIH).
DOI: 10.6084/m9.figshare.22312192.v1
title: Pain_research_workforce_survey_responses.xlsx

description: The de-identified responses from a survey on pain clinical researcher workforce challenges and opportunities administered by the Office of Pain Policy and Planning (OPPP) at the National Institute of Neurological Disorders and Stroke (NINDS) of the National Insitutes of Health (NIH).
DOI: 10.6084/m9.figshare.22312201
title: Pain_research_workforce_survey_codebook.docx

description: Codebook for intrepreting the results from a survey on pain clinical researcher workforce challenges and opportunities administered by the Office of Pain Policy and Planning (OPPP) at the National Institute of Neurological Disorders and Stroke (NINDS) of the National Insitutes of Health (NIH).
DOI: 10.6084/m9.figshare.22312201.v1
title: Pain_research_workforce_survey_codebook.docx

description: Codebook for intrepreting the results from a survey on pain clinical researcher workforce challenges and opportunities administered by the Office of Pain Policy and Planning (OPPP) at the National Institute of Neurological Disorders and Stroke (NINDS) of the National Insitutes of Health (NIH).
DOI: 10.5517/ccdc.csd.cc29646w
title: CCDC 2121057: Experimental Crystal Structure Determination

description: Related Article: Zhen-Lin Qiu, Xuan-Wen Chen, Yu-Dong Huang, Rong-Jing Wei, Ke-Shan Chu, Xin-Jing Zhao, Yuan-Zhi Tan|2022|Angew.Chem.,Int.Ed.|61|e202116955|doi:10.1002/anie.202116955
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.