cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1606643.08fu
title: SH1606643.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1458044.08fu
title: SH1458044.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1458045.08fu
title: SH1458045.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1458046.08fu
title: SH1458046.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1606644.08fu
title: SH1606644.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1606645.08fu
title: SH1606645.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1606646.08fu
title: SH1606646.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.25549/one-c4-30684
title: Blanche M. Baker, letters (1954/1958)

description: Blanche M. Baker, letters and postcards to William Lambert (W. Dorr Legg), Don Slater, L. H., Hal Call, and Helen King; includes a press release and clippings regarding a KPFA radio program featuring Blanche Baker (1954/1958)
DOI: 10.15156/bio/sh1458047.08fu
title: SH1458047.08FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/2dr54w
title: A new species of the Neotropical genus Beebeomyia (Diptera: Richardiidae) with observations of its biology on Dieffenbachia oerstedii (Araceae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hernández-Ortiz, V., Aguirre, A. (2015): A new species of the Neotropical genus Beebeomyia (Diptera: Richardiidae) with observations of its biology on Dieffenbachia oerstedii (Araceae). Journal of Natural History 49 (31): 1877-1889, DOI: 10.1080/00222933.2015.1005712
DOI: 10.15468/fhdknc
title: Two new free-living nematode species of Setosabatieria (Comesomatidea) from the East China Sea and the Chukchi Sea

description: This dataset contains the digitized treatments in Plazi based on the original journal article Guo, Y. Q., Huang, D. Y., Chen, Y. Z., Wang, J. J., Lin, R. C. (2015): Two new free-living nematode species of Setosabatieria (Comesomatidea) from the East China Sea and the Chukchi Sea. Journal of Natural History 49 (33): 2021-2033, DOI: 10.1080/00222933.2015.1006286
DOI: 10.15468/pt7hub
title: Comment on Psonis et al. (2015): ‘ Evaluation of the taxonomy of Helix cincta (Muller, 1774) and Helix nucula (Mousson, 1854); insights using mitochondrial DNA sequence data’

description: This dataset contains the digitized treatments in Plazi based on the original journal article Neubert, Eike, Korábek, Ondřej (2015): Comment on Psonis et al. (2015): ‘ Evaluation of the taxonomy of Helix cincta (Muller, 1774) and Helix nucula (Mousson, 1854); insights using mitochondrial DNA sequence data’. Journal of Natural History 49 (37): 2257-2263, DOI: 10.1080/00222933.2015.1021874
DOI: 10.15468/m5bc7f
title: Neufunde und bemerkenswerte Wiederfunde an Bienen in Oberösterreich (Hymenoptera: Apoidea)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ebmer, Andreas W., Ockermüller, Esther, Schwarz, Martin (2018): Neufunde und bemerkenswerte Wiederfunde an Bienen in Oberösterreich (Hymenoptera: Apoidea). Linzer biologische Beiträge 50 (1): 353-371, DOI: http://doi.org/10.5281/zenodo.3985727
DOI: 10.6084/m9.figshare.12176574
title: Supplementary Material_ S2.xlsx

description: Excel table with tufA and rbcL sequences produced in this study and from GenBank (Voucher number or published in peer-rewiev journals)
DOI: 10.6084/m9.figshare.12176574.v1
title: Supplementary Material_ S2.xlsx

description: Excel table with tufA and rbcL sequences produced in this study and from GenBank (Voucher number or published in peer-rewiev journals)
DOI: 10.6084/m9.figshare.12176466
title: Depth for Curve Data and Applications

description: In 1975, John W. Tukey defined statistical data depth as a function that determines the centrality of an arbitrary point with respect to a data cloud or to a probability measure. During the last decades, this seminal idea of data depth evolved into a powerful tool proving to be useful in various fields of science. Recently, extending the notion of data depth to the functional setting attracted a lot of attention among theoretical and applied statisticians. We go further and suggest a notion of data depth suitable for data represented as curves, or trajectories, which is independent of the parameterization. We show that our curve depth satisfies theoretical requirements of general depth functions that are meaningful for trajectories. We apply our methodology to diffusion tensor brain images and also to pattern recognition of handwritten digits and letters. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.12176466.v1
title: Depth for Curve Data and Applications

description: In 1975, John W. Tukey defined statistical data depth as a function that determines the centrality of an arbitrary point with respect to a data cloud or to a probability measure. During the last decades, this seminal idea of data depth evolved into a powerful tool proving to be useful in various fields of science. Recently, extending the notion of data depth to the functional setting attracted a lot of attention among theoretical and applied statisticians. We go further and suggest a notion of data depth suitable for data represented as curves, or trajectories, which is independent of the parameterization. We show that our curve depth satisfies theoretical requirements of general depth functions that are meaningful for trajectories. We apply our methodology to diffusion tensor brain images and also to pattern recognition of handwritten digits and letters. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.12174876
title: sphinx_006.tar.gz

description: 6/33 CAPTCHA data.
DOI: 10.6084/m9.figshare.12174843
title: Intelligence MendelVar example

description: MendelVar annotation results for Savage et al. (2018) intelligence GWASDetailed description of the output files in the "Results" section of MendelVar tutorial at:https://www.notion.so/mendelvar/MendelVar-tutorial-ab91d2a6acb846f2b9f2978fcd942dd5<br>
DOI: 10.6084/m9.figshare.12174876.v1
title: sphinx_006.tar.gz

description: 6/33 CAPTCHA data.
DOI: 10.6084/m9.figshare.12174843.v2
title: Intelligence MendelVar example

description: MendelVar annotation results for Savage et al. (2018) intelligence GWASDetailed description of the output files in the "Results" section of MendelVar tutorial at:https://www.notion.so/mendelvar/MendelVar-tutorial-ab91d2a6acb846f2b9f2978fcd942dd5<br>
DOI: 10.6084/m9.figshare.12174843.v1
title: Intelligence MendelVar example

description: MendelVar annotation results for Savage et al. (2018) intelligence GWAS<br>
DOI: 10.6084/m9.figshare.12174726
title: sphinx_005.tar.gz

description: 5/33 CAPTCHA data
DOI: 10.6084/m9.figshare.12174696
title: Male pattern baldness MendelVar example

description: MendelVar annotation results for Yap et al. (2018) Male-Pattern Baldness GWAS.Detailed description of the output files in the "Results" section of MendelVar tutorial at:https://www.notion.so/mendelvar/MendelVar-tutorial-ab91d2a6acb846f2b9f2978fcd942dd5
DOI: 10.6084/m9.figshare.12174699
title: Meteorological data of all International Tennis Federation Junior tournaments held during 2010-2019

description: We collected data on the environmental conditions in which all International Tennis Federation (ITF) Junior tennis tournaments were held during the last decade (2010-2019). The dates and locations of all ITF Junior tournaments were collected from the official ITF calendar in www.itftennis.com. Meteorological data (air temperature, relative humidity, wind speed, cloud cover) from the closest weather station to each tournament were collected from the National Oceanic and Atmospheric Administration database (https://www.ncei.noaa.gov/metadata/geoportal/rest/metadata/item/gov.noaa.ncdc:C00532/html) to calculate the wet bulb globe temperature (WBGT).
DOI: 10.6084/m9.figshare.12174726.v1
title: sphinx_005.tar.gz

description: 5/33 CAPTCHA data
DOI: 10.6084/m9.figshare.12174675
title: iFit Spectra

description: Dataset of spectra supporting iFit manuscript<br>
DOI: 10.6084/m9.figshare.12174636
title: Sediment biogeochemistry along an oyster aquaculture chronoseqence - flux dataset

description: This dataset accompanies the following article:<br>Ray NE, Al-Haj AN, Fulweiler RW. Sediment biogeochemistry along an oyster aquaculture chronosequence. <i>Marine Ecology Progress Series</i>. https://doi.org/10.3354/meps13377
DOI: 10.6084/m9.figshare.12174696.v1
title: Male pattern baldness MendelVar example

description: MendelVar annotation results for Yap et al. (2018) Male-Pattern Baldness GWAS.
DOI: 10.6084/m9.figshare.12174444
title: Pollination and survival visit data of the species Flourensia thurifera growing inside and outside the nurse Porlieria chilensis in an arid ecosystem

description: Pollination and survival visit data of the species Flourensia thurifera growing inside and outside the nurse Porlieria chilensis in an arid ecosystem
DOI: 10.6084/m9.figshare.12174444.v1
title: Pollination and survival visit data of the species Flourensia thurifera growing inside and outside the nurse Porlieria chilensis in an arid ecosystem

description: Pollination and survival visit data of the species Flourensia thurifera growing inside and outside the nurse Porlieria chilensis in an arid ecosystem
DOI: 10.15468/98pdr6
title: Redefinition of Nipponbathynella based on the four new species from East Asia (Crustacea: Bathynellacea: Parabathynellidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Park, Jong-Geun, Cho, Joo-Lae (2015): Redefinition of Nipponbathynella based on the four new species from East Asia (Crustacea: Bathynellacea: Parabathynellidae). Journal of Natural History 49 (37): 2275-2307, DOI: 10.1080/00222933.2015.1023226
DOI: 10.6084/m9.figshare.12174354
title: PONE-D-19-29214R1.xlsx

description: Effects of the adipokine Vaspin on HCASMC migration and proliferation.
DOI: 10.6084/m9.figshare.12174300
title: italy_22-01_to_16-03.csv

description: COVID-19 cases recorded in Itay from 22nd January to 16th March 2020. <br>
DOI: 10.6084/m9.figshare.12174354.v1
title: PONE-D-19-29214R1.xlsx

description: Effects of the adipokine Vaspin on HCASMC migration and proliferation.
DOI: 10.6084/m9.figshare.12174294
title: india_22-01_to_16-03.csv

description: COVID-19 cases recorded in India from 22nd January to 16th March 2020.<br>
DOI: 10.6084/m9.figshare.12174297
title: iran_22-01_to_16-03.csv

description: COVID-19 cases recorded in Iran from 22nd January to 16th March 2020.<br>
DOI: 10.6084/m9.figshare.12174291
title: china_22-01_to_16-03.csv

description: COVID-19 cases recorded in China from 22nd January to 16th March 2020.<br>
DOI: 10.6084/m9.figshare.12174300.v2
title: italy_22-01_to_16-03.csv

description: COVID-19 cases recorded in Itay from 22nd January to 16th March 2020. <br>
DOI: 10.6084/m9.figshare.12174294.v1
title: india_22-01_to_16-03.csv

description: COVID-19 cases recorded in India from 22nd January to 16th March 2020.<br>
DOI: 10.6084/m9.figshare.12174297.v1
title: iran_22-01_to_16-03.csv

description: COVID-19 cases recorded in Iran from 22nd January to 16th March 2020.<br>
DOI: 10.6084/m9.figshare.12174300.v1
title: italy_22-01_to_16-03.csv

description: Cases recorded in Itay<br>
DOI: 10.6084/m9.figshare.12174282
title: Using Amazonian Mauritia flexuosa fruit pulp as a functional food for postlarvae of Litopenaeus vannamei

description: It was investigated the effects of the inclusion of the Amazonian <i>Mauritia flexuosa</i> fruit pulp in diets used to feed <i>Litopenaeus vannamei </i>postlarvae (PL) (weight: 5.0 ± 0.3 mg). Five diets (37% protein, 10% lipid), containing 0 (Control group), 1.25, 2.50, 5.00 and 10.00 % (W/W) of <i>M. flexuosa</i> fruit pulp inclusion were offered to the postlarvae (1 shrimp L<sup>-1</sup>, 100 L-Tanks, treatments in triplicate) for 43 days. Measured variables included: the growth performance, carcass composition, total carotenoids content, total antioxidant capacity (ACAP), lipid peroxidation (TBARS), and economic benefits. <i>M. flexuosa</i> fruit pulp in the diet of <i>L. vannamei</i> postlarvae promoted positive effects on antioxidant capacity, retention of carotenoids, and reduced lipid peroxidation levels. Moreover, it decreased the protein production cost, pointing to the utility of this fruit in sustainable aquaculture. An inclusion level of 5% showed to be economically feasible and near the maximum induction of PL total antioxidant capacity.
DOI: 10.6084/m9.figshare.12174291.v1
title: china_22-01_to_16-03.csv

description: COVID-19 cases recorded in China from 22nd January to 16th March 2020.<br>
DOI: 10.6084/m9.figshare.12174255
title: Gene groups

description: Lists of genes to be included in the tensor probability model. The cancer gene census list is taken from the COSMIC cancer gene census.
DOI: 10.6084/m9.figshare.12174282.v1
title: Using Amazonian Mauritia flexuosa fruit pulp as a functional food for postlarvae of Litopenaeus vannamei

description: It was investigated the effects of the inclusion of the Amazonian <i>Mauritia flexuosa</i> fruit pulp in diets used to feed <i>Litopenaeus vannamei </i>postlarvae (PL) (weight: 5.0 ± 0.3 mg). Five diets (37% protein, 10% lipid), containing 0 (Control group), 1.25, 2.50, 5.00 and 10.00 % (W/W) of <i>M. flexuosa</i> fruit pulp inclusion were offered to the postlarvae (1 shrimp L<sup>-1</sup>, 100 L-Tanks, treatments in triplicate) for 43 days. Measured variables included: the growth performance, carcass composition, total carotenoids content, total antioxidant capacity (ACAP), lipid peroxidation (TBARS), and economic benefits. <i>M. flexuosa</i> fruit pulp in the diet of <i>L. vannamei</i> postlarvae promoted positive effects on antioxidant capacity, retention of carotenoids, and reduced lipid peroxidation levels. Moreover, it decreased the protein production cost, pointing to the utility of this fruit in sustainable aquaculture. An inclusion level of 5% showed to be economically feasible and near the maximum induction of PL total antioxidant capacity.
DOI: 10.6084/m9.figshare.12174252
title: Wang et al. example

description: Data corresponding to the Wang et al. examples; both the focused screen and the genome-scale CRISPR screen.
DOI: 10.6084/m9.figshare.12174246
title: Corsello et al. example

description: Data corresponding to the Corsello et al. drug repurposing example.
DOI: 10.6084/m9.figshare.12174165
title: Cancer cell line and gene features

description: Cancer cell line and gene features distilled from the Cancer Dependency Map. These are the posterior means of the model parameters U and V from the tensor probability model.<br>Row names are cancer cell line and gene identifiers, respectively.
DOI: 10.6084/m9.figshare.12174243
title: Limma example

description: Data corresponding to the Limma differential expression example.
DOI: 10.6084/m9.figshare.12174165.v1
title: Cancer cell line and gene features

description: Cancer cell line and gene features distilled from the Cancer Dependency Map. These are the posterior means of the model parameters U and V from the tensor probability model.<br>Row names are cancer cell line and gene identifiers, respectively.
DOI: 10.6084/m9.figshare.12174225
title: Kory et al example

description: Data corresponding to the Kory et al. example
DOI: 10.6084/m9.figshare.12174243.v1
title: Limma example

description: Data corresponding to the Limma differential expression example.
DOI: 10.6084/m9.figshare.12174246.v1
title: Corsello et al. example

description: Data corresponding to the Corsello et al. drug repurposing example.