cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15131/shef.data.7301591
title: Data for the paper "Humeral Fractures in Non-Ambulant Infants: CT-Based Finite Element Investigation Indicates an Unlikely Mechanism "

description: Complete results set of the study reported in "Humeral Fractures in Non-Ambulant Infants: CT-Based Finite Element Investigation Indicates an Unlikely Mechanism" by Zainab Altai, Marco Viceconti, Xinshan Li, and Amaka C. Offiah.
DOI: 10.15131/shef.data.7301591.v1
title: Data for the paper "Humeral Fractures in Non-Ambulant Infants: CT-Based Finite Element Investigation Indicates an Unlikely Mechanism "

description: Complete results set of the study reported in "Humeral Fractures in Non-Ambulant Infants: CT-Based Finite Element Investigation Indicates an Unlikely Mechanism" by Zainab Altai, Marco Viceconti, Xinshan Li, and Amaka C. Offiah.
DOI: 10.15131/shef.data.11395641
title: Data for paper "Is a wearable sensor based characterisation of gait robust enough to overcome differences between measurement protocols? A multi-centric pragmatic study in patients with Multiple Sclerosis"

description: This repository has been created to support the paper "Is a wearable sensor based characterisation of gait robust enough to overcome differences between measurement protocols? A multi-centric pragmatic study in patients with Multiple Sclerosis". The excel file includes both demographic and clinical information of each participant (1st worksheet) and the gait outcomes extracted from the wearable sensors for each participant (mean and SD values, 2nd worksheet). For details email l.angelini@sheffield.ac.uk <br>
DOI: 10.15131/shef.data.11854416
title: Birkhead et al. 2020: New insights from old eggs – the shape and thickness of Great Auk Pinguinus impennis eggs

description: Here, we make available the raw dataset (including shape indices and egg size measurements) used to statistically analyse and compare egg shape of the extinct Great Auk and its closely related sister species: Common Guillemot, Brünnich's Guillemot and Razorbill.<br>The dataset was used in Birkhead et al.'s (2020) Ibis manuscript intitled: New insights from old eggs – the shape and thickness of Great Auk Pinguinus impennis eggs (https://doi.org/10.1111/ibi.12820).
DOI: 10.15131/shef.data.11854416.v1
title: Birkhead et al. 2020: New insights from old eggs – the shape and thickness of Great Auk Pinguinus impennis eggs

description: Here, we make available the raw dataset (including shape indices and egg size measurements) used to statistically analyse and compare egg shape of the extinct Great Auk and its closely related sister species: Common Guillemot, Brünnich's Guillemot and Razorbill.<br>The dataset was used in Birkhead et al.'s (2020) Ibis manuscript intitled: New insights from old eggs – the shape and thickness of Great Auk Pinguinus impennis eggs (https://doi.org/10.1111/ibi.12820).
DOI: 10.7910/dvn/gwufi3
title: Replication Data for: Border Orientation in a Globalizing World

description: Border politics are a salient component of high international politics. States are increasingly building infrastructure to ‘secure’ their borders. We introduce the concept of border orientation to describe the extent to which the State is committed to the spatial display of capacities to control the terms of penetration of its national borders. Border orientation provides a lens through which to analyze resistance to globalization, growing populism, and the consequences of intensified border politics. We measure border orientation using novel, geo-spatial data on the built environment along the world’s borders and theorize that real and perceived pressures of globalization have resulted in more controlling forms of border governance. Empirical evidence supports this claim: states build more along their borders when faced with economic, cultural, and security-based anxieties. Border orientation enhances the study of border politics, complementing the politics of territorial division with a richer politics of liminal securitization and its consequences.
DOI: 10.26186/144600
title: High-resolution digital elevation model of the North West Shelf – 30m

description: High resolution bathymetry is a critical input to marine scientists. It can be used to study the seafloor and its marine habitats, to understand past sedimentary records or even to support the development of offshore engineering projects. Most methods to acquire bathymetry are costly and can only be practically deployed on relatively small areas. It is therefore necessary to develop new techniques to produce large scale and cost-effective bathymetry.

The University of Western Australia developed an integrated method which builds on Sentinel-2 satellites images, 3D seismic surveys and existing datasets to generate a regional digital elevation model. The method was applied to the North West Shelf of Australia and led to the creation of a new high-resolution bathymetry of the area, with a resolution of 10 m in nearshore areas and 30 m elsewhere. This dataset marks a major upgrade of the pre-existing regional 9 arc second data.

The vertical and spatial accuracy of the datasets have been thoroughly assessed using high-resolution datasets including publicly available MBES and LADS surveys. The assessment indicates that the seismic derived bathymetry has a depth accuracy better than 1 m + 2% of the absolute water depths while the satellites derived bathymetry has a depth accuracy better than 1 m + 5% of the absolute water depths. 

All datasets used as inputs are publicly available and the method is fully integrated in Python scripts making it readily applicable elsewhere in Australia and around the world. 

This dataset is published with the permission of the CEO, Geoscience Australia.
Not to be used for navigational purposes.
DOI: 10.5281/zenodo.4450759
title: U.S. Test System with High Spatial and Temporal Resolution for Renewable Integration Studies

description: <strong>Abstract</strong> Planning for power systems with high penetrations of variable renewable energy requires higher spatial and temporal granularity. However, most publicly available test systems are of insufficient fidelity for developing methods and tools for high- resolution planning. This paper presents methods to construct open-access test systems of high spatial granularity to more accurately represent current infrastructure and high temporal granularity to represent variability of demand and renewable resources. To demonstrate, a high-resolution test system representing the United States is created using only publicly available data. This test system is validated by running it in a production cost model, with results validated against historical generation to ensure that they are representative. The resulting open source test system can support power system transition planning and aid in development of tools to answer questions around how best to reach decarbonization goals, using the most effective combinations of transmission expansion, renewable generation, and energy storage. <strong>Documentation of dataset development</strong> A paper describing the process of developing the dataset is available at https://arxiv.org/abs/2002.06155. Please cite as: Y. Xu, Nathan Myhrvold, Dhileep Sivam, Kaspar Mueller, Daniel J. Olsen, Bainan Xia, Daniel Livengood, Victoria Hunt, Benjamin Rouillé d'Orfeuil, Daniel Muldrew, Merrielle Ondreicka, Megan Bettilyon, "U.S. Test System with High Spatial and Temporal Resolution for Renewable Integration Studies," 2020 IEEE PES General Meeting, Montreal, Canada, 2020. <strong>Dataset version history</strong> 0.1, January 31, 2020: initial data upload. 0.2, March 10, 2020: addition of Tabular Data Package metadata, modifications to cost curves and transmission capacities aimed at more closely matching optimization results to historical data. 0.2.1, March 25, 2020: [erroneous upload] 0.2.2, March 26, 2020: [erroneous upload] 0.2.3, March 31, 2020: corrected a bug in the wind profile generation process which was pulling the wrong locations for wind farms outside the Western Interconnection. 0.2.4, April 15, 2020: added ramp rate limits to fossil fuel generators. 0.3.0, June 23, 2020: Scaling cost curves to more produce LMPs which are more reflective of historical market prices, updating the set of back-to-back HVDC converter stations to be more reflective of current capacities/locations, miscellaneous data fixes to a few erroneous cost curve and heat rate curve parameters. 0.4.0, January 19, 2021: Updated the base grid to include generators added in the years 2017-2019 Added hypothetical offshore wind generators and power profiles at 1 MW capacities Added a .mat file representing the 'base' grid for use with REISE.jl Added several sets of input files which simulate the 'current' (2020) grid, as well as potential future grids for the year 2030.
DOI: 10.6084/m9.figshare.3761562.v1749
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.5281/zenodo.4451391
title: Carbon dioxide, methane, and chemical data from Batang Ai reservoir

description: The dataset contains biogeochemical in situ field measurements taken in Batang Ai reservoir (located on the Borneo Island, Malaysia). Samples were taken over four sampling campaigns from 2016 to 2018. Data was used to analyse carbon dioxide and methane flux patterns and to calculate the carbon footprint of the reservoir in the paper: “The carbon footprint of a Malaysian tropical reservoir: measured versus modeled estimates highlight the underestimated key role of downstream processes” (https://doi.org/10.5194/bg-17-1-2020). Data were also used to calculate budgets of CO2 and CH4 in the epilimnion of Batang Ai reservoir in the paper: “Changing sources and processes sustaining surface CO2 and CH4 fluxes along a tropical river to reservoir system” (https://doi.org/10.5194/bg-2020-258).
DOI: 10.5281/zenodo.3629897
title: Carbon dioxide, methane, and chemical data from Batang Ai reservoir

description: The dataset contains biogeochemical in situ field measurements taken in Batang Ai reservoir (located on the Borneo Island, Malaysia). Samples were taken over four sampling campaigns from 2016 to 2018. Data was used to analyse carbon dioxide and methane flux patterns and to calculate the carbon footprint of the reservoir in the paper: “The carbon footprint of a Malaysian tropical reservoir: measured versus modeled estimates highlight the underestimated key role of downstream processes” (https://doi.org/10.5194/bg-17-1-2020). Data were also used to calculate budgets of CO2 and CH4 in the epilimnion of Batang Ai reservoir in the paper: “Changing sources and processes sustaining surface CO2 and CH4 fluxes along a tropical river to reservoir system” (https://doi.org/10.5194/bg-2020-258).
DOI: 10.25550/1-ya78
title: Tissue-specific roles of AP-2 transcription factors, Tfap2a and Tfap2b, in dental development

description: Mice possess two types of teeth that differ in their cusp patterns; incisors have one cusp and molars have multiple cusps. The patterning of these two types of teeth relies on fine-tuning of the reciprocal molecular signaling between dental epithelial and mesenchymal tissues during embryonic development. The AP-2 transcription factors, particularly Tfap2a and Tfap2b, are essential components of such epithelial-mesenchymal signaling interactions that coordinate craniofacial development in mice and other vertebrates, but little is known about their roles in the regulation of tooth development and shape. Here we demonstrate that incisors and molars differ in their temporal and spatial expression of Tfap2a and Tfap2b. At the bud stage, Tfap2a is expressed in both the epithelium and mesenchyme of the incisors and molars, but Tfap2b expression is restricted to the molar mesenchyme, only later appearing in the incisor epithelium. Tissue-specific deletions show that loss of the epithelial domain of Tfap2a and Tfap2b affects the number and spatial arrangement of the incisors, notably resulting in duplicated lower incisors. In contrast, deletion of these two genes in the mesenchymal domain has little effect on tooth development. Collectively these results implicate epithelial expression of Tfap2a and Tfap2b in regulating the extent of the dental lamina associated with patterning the incisors and suggest that these genes contribute to morphological differences between anterior (incisor) and posterior (molar) teeth within the mammalian dentition.
DOI: 10.15468/yqrvmc
title: New records of Demospongiae (Porifera) from Reserva Marina El Pelado (Santa Elena, Ecuador), with description of Tedania (Tedania) ecuadoriensis sp. nov.

description: This dataset contains the digitized treatments in Plazi based on the original journal article Jaramillo, Karla B., Condor-Lujan, Baslavi, Longakit, Belinda, Rodriguez, Jenny, Thomas, Olivier P., McCormack, Grace, Hajdu, Eduardo (2021): New records of Demospongiae (Porifera) from Reserva Marina El Pelado (Santa Elena, Ecuador), with description of Tedania (Tedania) ecuadoriensis sp. nov. ZooKeys 1011: 101-120, DOI: http://dx.doi.org/10.3897/zookeys.1011.54485, URL: http://dx.doi.org/10.3897/zookeys.1011.54485
DOI: 10.25345/c5p20d
title: MassIVE MSV000086721 - GNPS - Artificial Sputum Medium Formulation Impacts Psuedomonas aeruginosa Chemotype
title: Paper Title: Artificial Sputum Medium Formulation, Including Porcine Gastric Mucin, Impacts Pseudomonas aeruginosa Phenotype and Chemotype Author List: Neve RL and Phelan VV. Brief description of data submitted: Metabolomics results of PAO1 grown in 9 ASM and LB medium. Raw data, open source data, feature finding output files, and Cytoscape network files used to generate Figures 2 Classical Molecular Network and 3 Feature Based Molecular Network.
DOI: 10.5066/p9nnsi38
title: Liquid Chromatography Triple Quadrupole Mass Spectrometry (LC/MS/MS) analysis of cyanobacteria cultures from Lake Elsinore and Canyon Lake (CA, USA, 2016) for cyanotoxins and algal toxins

description: Cyanobacteria are common in inland water bodies. Many strains are known to produce potent toxins (cyanotoxins) which can impact human and animal health in sufficient concentrations. Lake Elsinore and Canyon Lake are two impaired lakes in California with frequent cyanobacteria blooms that are not monitored for toxin production. These data document the liquid chromatography triple quadrupole mass spectrometry (LC/MS/MS) results for 21 cyanotoxins and algal toxins in 13 cyanobacteria samples collected during bloom events from Lake Elsinore and Canyon Lake (CA, USA) in July, August, and September 2016.
DOI: 10.6084/m9.figshare.13611385.v1
title: A comparison of methods for clustering longitudinal data with slowly changing trends

description: Longitudinal clustering provides a detailed yet comprehensible description of time profiles among subjects. With several approaches that are commonly used for this purpose, it remains unclear under which conditions a method is preferred over another method. We investigated the performance of five methods using Monte Carlo simulations on synthetic datasets, representing various scenarios involving polynomial time profiles. The performance was evaluated on two aspects: The agreement of the group assignment to the simulated reference, as measured by the split-join distance, and the trend estimation error, as measured by a weighted minimum of the mean squared error (WMMSE). Growth mixture modeling (GMM) was found to achieve the best overall performance, followed closely by a two-step approach using growth curve modeling and <i>k</i>-means (GCKM). Considering the model similarities between GMM and GCKM, the latter is preferred for large datasets for its computational efficiency. Longitudinal <i>k</i>-means (KML) and group-based trajectory modeling were found to have practically identical solutions in the case that the group trajectory model of the latter method is correctly specified. Both methods performed less than GMM and GCKM in most settings.
DOI: 10.25934/00005886.1
title: IPD datapackage for study 'A Randomized, Double-blind, Parallel-group, Placebo-controlled, Fixed-dose Study Comparing the Efficacy and Safety of Lu AA21004 Versus Placebo in Acute Treatment of Adults With Major Depressive Disorder' and research request: 'A novel statistical approach to detect the efficacy of drugs that have heterogeneous treatment effects'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.15468/35m22d
title: A revision of pipistrelle-like bats (Mammalia: Chiroptera: Vespertilionidae) in East Africa with the description of new genera and species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Monadjem, Ara, Demos, Terrence C, Dalton, Desire L, Webala, Paul W, Musila, Simon, Kerbis Peterhans, Julian C, Patterson, Bruce D (2020): A revision of pipistrelle-like bats (Mammalia: Chiroptera: Vespertilionidae) in East Africa with the description of new genera and species. Zoological Journal of the Linnean Society (Zool. J. Linn. Soc.) 190: 1-33, DOI: 10.1093/zoolinnean/zlaa087, URL: http://dx.doi.org/10.1093/zoolinnean/zlaa087
DOI: 10.6084/m9.figshare.13370504.v3
title: Speedtest Open Data - Australia 2020-04-01 extract

description: This is an Australian extract of Speedtest Open data available at Amazon WS (link below - opendata.aws).<br>AWS data licence is "CC BY-NC-SA 4.0", so use of this data must be:- non-commercial (NC)- reuse must be share-alike (SA)(add same licence).This restricts the standard CC-BY Figshare licence.<br>A world speedtest open data was dowloaded (&gt;400Mb, 7M lines of data). An extract of Australia's location (lat, long) revealed 88,000 lines of data (attached as csv).<br>A Jupyter notebook of extract process is attached.A link to Twitter thread of outputs provided.A link to Data tutorial provided (GitHub), including Jupyter Notebook to analyse World Speedtest data, selecting one US State.<br>Data Shows:- 3.1M speedtests- 762,000 devices- 88,000 grid locations (600m * 600m), summarised as a point- average speed 33.7Mbps (down), 12.4M (up)- Max speed 724Mbps- data is for 600m * 600m grids, showing average speed up/down, number of tests, and number of users (IP). Added centroid, and now lat/long.<br>See tweet of image of centroids also attached.<br>Versions:v3 - Add super fast data (&gt;100Mbps) less than 1% of data - 697 lines. Includes png of superfast.plot(). Link below to Google Maps version of superfast data points. Also Google map of first 100 data points - sample data. Geojson format for loading into GeoPandas, per Jupyter Notebook. New version of Jupyter Notebook, v.1.1.v2 - add centroids image.v1 - initial data load.
DOI: 10.6084/m9.figshare.13611482.v1
title: Supplementary Material files

description: Supplementary Material files of G3 include Figure S1 and Phenotype and Genetype data.
DOI: 10.6084/m9.figshare.13611482
title: Supplementary Material files

description: Supplementary Material files of G3 include Figure S1 and Phenotype and Genetype data.
DOI: 10.5281/zenodo.4451464
title: Using Corpus Studies to Find the Origins of the Madrigal: Music and Feature Values

description: This distribution includes files associated with the experiments described in the "Using Corpus Studies to Find the Origins of the Madrigal" paper presented at the 2021 Future Directions of Music Cognition conference (http://org.osu.edu/mascats/). Our group encoded all the music from the original sources ourselves, using Sibelius, and exported the Sibelius data as PDF and MIDI files. The details of the corpus are described in the "Florence 164 Metadata.xlsx" file and in the conference paper itself. All files included in this archive are distributed under a "CC BY-SA 4.0" license" license (https://creativecommons.org/licenses/by-sa/4.0/). All features were extracted using jSymbolic 2.2 (http://jmir.sourceforge.net) directly from the MIDI encodings included here. Details on all the individual features extracted with the software are available in the jSymbolic manual (http://jmir.sourceforge.net/manuals/jSymbolic_manual/home.html). The features are presented as follows in the "F164_Extracted_Features" folder: - F164_Feature_Definitions.xml: Descriptions of all extracted features, encoded in ACE XML 1.0, as output directly by jSymbolic. This file does not itself include any feature values. - F164_Feature_Values.xml: Extracted feature values, encoded in ACE XML 1.0, as output directly by jSymbolic. The features are described in the FeatureDefinitions.xml file. Class associations are implied by the folder containing each MIDI file. - F164_Feature_Values_BasicCSV: Extracted feature values encoded in a CSV file, as output directly by jSymbolic. Class associations are implied by the folder containing each MIDI file. - F164_Feature_Values_HumanReadable.xlsx: Extracted features formatted into a human-readable Microsoft Excel file. Group averages and standard deviations have been added to the bottom. - F164_Feature_Values_WekaReady.csv: Extracted feature values encoded in a CSV file in a format readable by Weka (https://www.cs.waikato.ac.nz/ml/weka/). Class values have been added in a column on the right, and file paths have been removed, as required by Weka.<br>
description: Thanks to Ian Lorenz, Jonathan Stuchbery, Linda Pearse, Sara Sabol, Vi-An Tran, Zoey Cochran, Tristan Tenaglio, Rían Adamían, Ichiro Fujinaga, and SIMSSA for their important contributions. Financial support was provided by the granting agencies FRQSC (Fonds de recherche Société et Culture du Québec) and SSHRC (Social Sciences and Humanities Research Council of Canada).