cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19761850
title: Supplementary Material for: Management Of Acute Adrenal Insufficiency Related Adverse Events In Children With Congenital Adrenal Hyperplasia - Results Of An International Survey Of Specialist Centres

description: Introduction There is wide variation in reported rates of acute adrenal insufficiency (AI) related adverse events (sick day episodes and adrenal crises) between centres. This study aimed to evaluate the level of consensus on criteria considered essential for defining and managing these events in children with Congenital Adrenal Hyperplasia. Methods Active users of the International Congenital Adrenal Hyperplasia & International Disorders of Sex Development (I-CAH/I-DSD) Registries (n=66), non-active users of I-CAH/I-DSD (n=35) and the EuRRECa e-Reporting Registry (n=10) were approached to complete an online survey. Results Fifty-six centres from 27 countries responded to the survey; the response rates for the three groups were 42 (65%), 11 (31%) and 3 (30%), respectively. Steroid management plans, one to one patient education and contact details of health care staff were provided by over 90% of centres in high income countries. All 56 centres advised glucocorticoid stress dosing in the event of fever. Less common indications for sick day dosing included vaccination and mild afebrile intercurrent illness, recommended by 17 (30%) and 9 (16%) centres, respectively. The most frequently reported stress dosing regimens were tripling the total daily dose of hydrocortisone and administering 3 times daily and doubling or tripling the largest daily hydrocortisone dose depending on the nature of the trigger and administering 3 times daily, recommended by 24 (43%) and 21 (38%) centres, respectively. Vomiting was the most common indication for intramuscular hydrocortisone injection, reported by 34 (61%) centres. Over 50% of respondents indicated that essential clinical criteria for adrenal crisis should include fatigue and nausea or vomiting and over 60% indicated that hypotension, hyponatraemia, hyperkalaemia and clinical improvement following parenteral glucocorticoids were essential criteria. In the event of an adrenal crisis, 47 (84%) reported that the majority of patients were admitted to hospital. For the management of an adrenal crisis, a bolus parenteral injection of hydrocortisone was the most frequently administered medication, reported by 50 (89%) centres. Conclusion Although there is variation in the definition and management of AI related adverse events in children amongst centres, there is also a good level of consensus on specific aspects that can lead to greater benchmarking of care.
DOI: 10.6084/m9.figshare.19976426
title: Dataset, supplemental material3.xlsx

description: This is the dataset of the survey.
DOI: 10.6084/m9.figshare.19976426.v1
title: Dataset, supplemental material3.xlsx

description: This is the dataset of the survey.
DOI: 10.6084/m9.figshare.19977287
title: Supplementary Material for: Association between Early Cognitive Impairment and Short-Term Functional Outcome in Acute Ischemic Stroke

description: <b><i>Background:</i></b> Little is known about the association between poststroke cognitive impairment (PSCI) and functional outcome in the acute care phase of ischemic stroke and the influence of the clinical condition of acute stroke on this association. We examined this issue, taking into account stroke-related factors, in a hospital-based prospective study of patients with acute ischemic stroke. The same analysis was also performed after subsequent rehabilitation to investigate whether the association observed in the acute care phase persisted after that. For comparison, the same analysis was performed for pre-stroke dementia (PreSD). <b><i>Methods:</i></b> We included in the study a total of 923 patients with acute ischemic stroke who were admitted to a hospital from 2012 to 2020 in Japan. Cognitive function was assessed using the Mini-Mental State Examination and Raven’s Colored Progressive Matrices test at an average of 6.3 days after stroke onset. The subjects were divided into three groups with normal cognition, PSCI, and PreSD. Study outcome was a poor functional outcome, defined as a modified Rankin Scale score of ≥3 at the end of acute care (median 21 days after admission). Among total subjects, 460 were also assessed for poor functional outcome after rehabilitation (median 77 days after admission). A logistic regression model was applied in this study. <b><i>Results:</i></b> Patients with PSCI and PreSD had higher median National Institute of Health Stroke Scale scores than those with normal cognition (median [IQR]: 3 [2–6], 4 [2–12], and 2 [1–4], respectively). The age- and sex-adjusted cumulative incidence of poor functional outcome was significantly higher in patients with PSCI and PreSD than in those with normal cognition in the acute care and rehabilitation phases. In the acute care phase, these associations remained significant after adjustment for stroke-related factors and other confounders (multivariable-adjusted odds ratio [95% CI] for PSCI vs. normal cognition: 3.28 [2.07–5.20]; for PreSD: 2.39 [1.40–4.08]). Similar results were observed in the rehabilitation phase (for PSCI: 2.48 [1.31–4.70]; for PreSD: 3.92 [1.94–7.92]). <b><i>Conclusions:</i></b> Our findings suggest that PSCI, as well as PreSD, is possibly associated with the development of poor functional outcome in the acute care phase of ischemic stroke, and this association continues thereafter.
DOI: 10.6084/m9.figshare.19977287.v1
title: Supplementary Material for: Association between Early Cognitive Impairment and Short-Term Functional Outcome in Acute Ischemic Stroke

description: <b><i>Background:</i></b> Little is known about the association between poststroke cognitive impairment (PSCI) and functional outcome in the acute care phase of ischemic stroke and the influence of the clinical condition of acute stroke on this association. We examined this issue, taking into account stroke-related factors, in a hospital-based prospective study of patients with acute ischemic stroke. The same analysis was also performed after subsequent rehabilitation to investigate whether the association observed in the acute care phase persisted after that. For comparison, the same analysis was performed for pre-stroke dementia (PreSD). <b><i>Methods:</i></b> We included in the study a total of 923 patients with acute ischemic stroke who were admitted to a hospital from 2012 to 2020 in Japan. Cognitive function was assessed using the Mini-Mental State Examination and Raven’s Colored Progressive Matrices test at an average of 6.3 days after stroke onset. The subjects were divided into three groups with normal cognition, PSCI, and PreSD. Study outcome was a poor functional outcome, defined as a modified Rankin Scale score of ≥3 at the end of acute care (median 21 days after admission). Among total subjects, 460 were also assessed for poor functional outcome after rehabilitation (median 77 days after admission). A logistic regression model was applied in this study. <b><i>Results:</i></b> Patients with PSCI and PreSD had higher median National Institute of Health Stroke Scale scores than those with normal cognition (median [IQR]: 3 [2–6], 4 [2–12], and 2 [1–4], respectively). The age- and sex-adjusted cumulative incidence of poor functional outcome was significantly higher in patients with PSCI and PreSD than in those with normal cognition in the acute care and rehabilitation phases. In the acute care phase, these associations remained significant after adjustment for stroke-related factors and other confounders (multivariable-adjusted odds ratio [95% CI] for PSCI vs. normal cognition: 3.28 [2.07–5.20]; for PreSD: 2.39 [1.40–4.08]). Similar results were observed in the rehabilitation phase (for PSCI: 2.48 [1.31–4.70]; for PreSD: 3.92 [1.94–7.92]). <b><i>Conclusions:</i></b> Our findings suggest that PSCI, as well as PreSD, is possibly associated with the development of poor functional outcome in the acute care phase of ischemic stroke, and this association continues thereafter.
DOI: 10.5281/zenodo.6006289
title: Additional evidence for a pulsar wind nebula in SN 1987A from multi-epoch X-ray data and MHD modelling

description: This is a basic reproduction package for the paper "Additional evidence for a pulsar wind nebula in the hearth of sN 1987A from multi-epoch X-ray data and MHD modeling" by Greco et al. 2022. It aims to provide the most important data products to check and reproduce the main results of the paper.
DOI: 10.6084/m9.figshare.12027537
title: Influence of Bentall Procedure on Left Ventricular Function

description: Abstract Objective: To evaluate the influence of Bentall procedure on left ventricular function and condition on long-term follow-up. Methods: Seventy-three consecutive patients who underwent an aortic root and ascending aorta replacement with composite valve button Bentall or flanged Bentall technique, from January 2007 to November 2018, were included in this retrospective study. Results: Postoperative left ventricular ejection fraction significantly increased (52.14±11.38 vs. 56.79±11.36; P=0.041), left ventricular end-systolic diameter significantly reduced (38.25±9.31 mm vs. 34.17±9.15 mm; P=0.027), left ventricular end-diastolic diameter significantly reduced (56.42±9.72 mm vs. 51.58±9.03 mm; P=0.01), and left atrial diameter significantly reduced (45.33±12.77 mm vs. 39.25±12.41 mm; P=0.01), compared to preoperative values. Our long-term survival results are comparable with previous studies in which survival rates in 5 years and 10 years were 83.5% and 69.8%, respectively. In comparing patients according to their New York Heart Association (NYHA) functional class, it was shown that their postoperative functional capacity was improved during the follow-up period (2.1±0.56 vs. 1.2±0.42; P=0.001). Conclusion: The Bentall procedure significantly improved the left ventricular systolic function and condition and decreased the left ventricular end-systolic and end-diastolic diameters and the left atrial diameter on long-term follow-up, based on the transthoracic echocardiography. Bentall procedure can be performed with acceptable mortality and morbidity rates on long-term follow-up.
DOI: 10.6084/m9.figshare.12027537.v1
title: Influence of Bentall Procedure on Left Ventricular Function

description: Abstract Objective: To evaluate the influence of Bentall procedure on left ventricular function and condition on long-term follow-up. Methods: Seventy-three consecutive patients who underwent an aortic root and ascending aorta replacement with composite valve button Bentall or flanged Bentall technique, from January 2007 to November 2018, were included in this retrospective study. Results: Postoperative left ventricular ejection fraction significantly increased (52.14±11.38 vs. 56.79±11.36; P=0.041), left ventricular end-systolic diameter significantly reduced (38.25±9.31 mm vs. 34.17±9.15 mm; P=0.027), left ventricular end-diastolic diameter significantly reduced (56.42±9.72 mm vs. 51.58±9.03 mm; P=0.01), and left atrial diameter significantly reduced (45.33±12.77 mm vs. 39.25±12.41 mm; P=0.01), compared to preoperative values. Our long-term survival results are comparable with previous studies in which survival rates in 5 years and 10 years were 83.5% and 69.8%, respectively. In comparing patients according to their New York Heart Association (NYHA) functional class, it was shown that their postoperative functional capacity was improved during the follow-up period (2.1±0.56 vs. 1.2±0.42; P=0.001). Conclusion: The Bentall procedure significantly improved the left ventricular systolic function and condition and decreased the left ventricular end-systolic and end-diastolic diameters and the left atrial diameter on long-term follow-up, based on the transthoracic echocardiography. Bentall procedure can be performed with acceptable mortality and morbidity rates on long-term follow-up.
DOI: 10.6084/m9.figshare.19977323
title: Supplementary Material for: Automated CT Perfusion Detection of the Acute Infarct Core in Ischemic Stroke: A Systematic Review and Meta-Analysis

description: <b><i>Introduction:</i></b> In patients with acute ischemic stroke, the location and volume of an irreversible infarct core determine prognosis and treatment. We aimed to determine if automated CT perfusion (CTP) is non-inferior to diffusion-weighted imaging (DWI) or fluid-attenuated inversion recovery (FLAIR) in predicting the acute infarct core. <b><i>Methods:</i></b> In this systematic review and meta-analysis, we searched MEDLINE and EMBASE from 1960 to December 2020. Five outcome measures were examined: volumetric difference, volumetric correlation, sensitivity and specificity at the patient level, Dice coefficient, and sensitivity and specificity at the voxel level. A random-effects meta-analysis was performed for volumetric difference and correlation. <b><i>Results:</i></b> From 3,986 studies retrieved, 48 studies met our inclusion criteria with 46 studies on anterior circulation, one study on posterior circulation, and one study on lacunar infarct strokes. In anterior circulation stroke, there were no significant mean volumetric differences between CTP and acute DWI (cerebral blood flow [CBF] 0.52 mL, 95% CI [−0.07, 1.11], <i>I</i><sup>2</sup> 0.0%; relative CBF [rCBF] 3.01 mL, 95% CI [−0.46, 6.48], <i>I</i><sup>2</sup> 82.6%; relative cerebral blood volume [rCBV] −12.84 mL, 95% CI [−38.56, 12.88], <i>I</i><sup>2</sup> 96.2%) and between CTP and delayed DWI or FLAIR (rCBF −1.29 mL, 95% CI [−6.49, 3.92], <i>I</i><sup>2</sup> 91.8%; rCBV −5.80 mL, 95% CI [−16.20, 4.60], <i>I</i><sup>2</sup> 84.2%). Mean correlation between CTP and acute DWI was 0.90 (95% CI [0.80, 0.95], <i>I</i><sup>2</sup> 60.0%) for rCBF and 0.84 (95% CI [0.58, 0.94], <i>I</i><sup>2</sup> 93.5%) for rCBV. Mean correlation between CTP and delayed DWI or FLAIR was 0.74 (95% CI [0.57, 0.85], <i>I</i><sup>2</sup> 94.6%) for rCBF and 0.90 (95% CI [0.69, 0.97], <i>I</i><sup>2</sup> 93.1%) for rCBV. Sensitivity and specificity at the patient level were reported by three studies and Dice coefficient by four studies. Statistical analysis could not be performed for sensitivity and specificity at the voxel level. Limited evidence was available for posterior circulation or lacunar infarct strokes. <b><i>Conclusion:</i></b> Due to significant heterogeneity and insufficient high-quality studies reporting each outcome, there is insufficient evidence to reliably determine the accuracy of CTP prediction of the infarct core compared to DWI or FLAIR.
DOI: 10.6084/m9.figshare.19977323.v1
title: Supplementary Material for: Automated CT Perfusion Detection of the Acute Infarct Core in Ischemic Stroke: A Systematic Review and Meta-Analysis

description: <b><i>Introduction:</i></b> In patients with acute ischemic stroke, the location and volume of an irreversible infarct core determine prognosis and treatment. We aimed to determine if automated CT perfusion (CTP) is non-inferior to diffusion-weighted imaging (DWI) or fluid-attenuated inversion recovery (FLAIR) in predicting the acute infarct core. <b><i>Methods:</i></b> In this systematic review and meta-analysis, we searched MEDLINE and EMBASE from 1960 to December 2020. Five outcome measures were examined: volumetric difference, volumetric correlation, sensitivity and specificity at the patient level, Dice coefficient, and sensitivity and specificity at the voxel level. A random-effects meta-analysis was performed for volumetric difference and correlation. <b><i>Results:</i></b> From 3,986 studies retrieved, 48 studies met our inclusion criteria with 46 studies on anterior circulation, one study on posterior circulation, and one study on lacunar infarct strokes. In anterior circulation stroke, there were no significant mean volumetric differences between CTP and acute DWI (cerebral blood flow [CBF] 0.52 mL, 95% CI [−0.07, 1.11], <i>I</i><sup>2</sup> 0.0%; relative CBF [rCBF] 3.01 mL, 95% CI [−0.46, 6.48], <i>I</i><sup>2</sup> 82.6%; relative cerebral blood volume [rCBV] −12.84 mL, 95% CI [−38.56, 12.88], <i>I</i><sup>2</sup> 96.2%) and between CTP and delayed DWI or FLAIR (rCBF −1.29 mL, 95% CI [−6.49, 3.92], <i>I</i><sup>2</sup> 91.8%; rCBV −5.80 mL, 95% CI [−16.20, 4.60], <i>I</i><sup>2</sup> 84.2%). Mean correlation between CTP and acute DWI was 0.90 (95% CI [0.80, 0.95], <i>I</i><sup>2</sup> 60.0%) for rCBF and 0.84 (95% CI [0.58, 0.94], <i>I</i><sup>2</sup> 93.5%) for rCBV. Mean correlation between CTP and delayed DWI or FLAIR was 0.74 (95% CI [0.57, 0.85], <i>I</i><sup>2</sup> 94.6%) for rCBF and 0.90 (95% CI [0.69, 0.97], <i>I</i><sup>2</sup> 93.1%) for rCBV. Sensitivity and specificity at the patient level were reported by three studies and Dice coefficient by four studies. Statistical analysis could not be performed for sensitivity and specificity at the voxel level. Limited evidence was available for posterior circulation or lacunar infarct strokes. <b><i>Conclusion:</i></b> Due to significant heterogeneity and insufficient high-quality studies reporting each outcome, there is insufficient evidence to reliably determine the accuracy of CTP prediction of the infarct core compared to DWI or FLAIR.
DOI: 10.5281/zenodo.6501824
title: HDOA

description: These data were used for the analysis described in "High-Density EEG power topography during confusional arousal" published in Cortex. 20 segments were extracted from 2 recoding nights (11 from the first night, 9 from the second night). Each segment was recorded around the motor onset of each confusional arousal episode (3 minutes before, 1 minute after). Files are in the eeglab format (.set files for metadata, .fdt files for raw data, meaning 2 files for each segment). Files are coded as DOA_BSL (first night) or DOA_SAS (second night) _P_ segment number (relative do the beginning of each night). Further information is available upon request to the corresponding author (Anna Castelnovo): anna.astelnovo@eoc.ch, castelnovo.anna@gmail.com
DOI: 10.5281/zenodo.6501823
title: HDOA

description: These data were used for the analysis described in "High-Density EEG power topography during confusional arousal" published in Cortex. 20 segments were extracted from 2 recoding nights (11 from the first night, 9 from the second night). Each segment was recorded around the motor onset of each confusional arousal episode (3 minutes before, 1 minute after). Files are in the eeglab format (.set files for metadata, .fdt files for raw data, meaning 2 files for each segment). Files are coded as DOA_BSL (first night) or DOA_SAS (second night) _P_ segment number (relative do the beginning of each night). Further information is available upon request to the corresponding author (Anna Castelnovo): anna.astelnovo@eoc.ch, castelnovo.anna@gmail.com
DOI: 10.25835/qi8a8xpz
title: Templates Recommendation in the Open Research Knowledge Graph

description: This dataset has been created for implementing a content-based recommender system in the context of the Open Research Knowledge Graph (ORKG). The recommender system accepts research paper's title and abstracts as input and recommends existing templates in the ORKG semantically relevant to the given paper. Two approaches have been trained on this dataset in the context of this https://doi.org/10.15488/11834 master's thesis, namely a Natural Language Inference (NLI) approach based on SciBERT embeddings and an unsupervised approach based on ElasticSearch. This publication consists therefore of one general dataset, two training sets for each approach, validation set for the supervised approach and a test set for both approaches.
DOI: 10.6084/m9.figshare.19948319
title: Data for Figure S23 - r values

description: Dataset for the r values and p values for the pairwise association based on hierarchical clustering of all 7,128 non-zero genes across 3,176 bacterial samples as presence-absence data represented by their correlation coefficients.
DOI: 10.6084/m9.figshare.19948319.v1
title: Data for Figure S23 - r values

description: Dataset for the r values and p values for the pairwise association based on hierarchical clustering of all 7,128 non-zero genes across 3,176 bacterial samples as presence-absence data represented by their correlation coefficients.
DOI: 10.5281/zenodo.6609695
title: Mooring observation data in the Yellow Sea

description: This dataset contains the measured velocity at the mooring station in the Yellow Sea. It is a supplementary of the manuscript "<strong>Observations of prevailing internal solitary waves between offshore islands in the northern Yellow Sea during summer</strong>". Please let me know if you need any more information
DOI: 10.5281/zenodo.6609694
title: Mooring observation data in the Yellow Sea

description: This dataset contains the measured velocity at the mooring station in the Yellow Sea. It is a supplementary of the manuscript "<strong>Observations of prevailing internal solitary waves between offshore islands in the northern Yellow Sea during summer</strong>". Please let me know if you need any more information
DOI: 10.6084/m9.figshare.19977407
title: MallnowITS.dataset.RDS

description: The analysed dataset includes the OTU count table, OTU taxonomy, guild annotation, sequences and sample metadata stored as a list stored in a single .RDS R (in the software R, use readRDS() function).
DOI: 10.6084/m9.figshare.19977407.v1
title: MallnowITS.dataset.RDS

description: The analysed dataset includes the OTU count table, OTU taxonomy, guild annotation, sequences and sample metadata stored as a list stored in a single .RDS R (in the software R, use readRDS() function).
DOI: 10.26106/3d95-ns86
title: Influence of pH measurement inaccuracy on the values of acidity constant determined on the basis of electrophoretic and thermophoretic data - concept
DOI: 10.5519/qd.wugfcji7
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (10 records)
DOI: 10.48544/062816e6-6e55-484a-942b-15678b01335c
title: Huisje boompje beestje
DOI: 10.23729/adea3fa8-054e-4fd2-86f4-e6c83ad7deee
title: Ore Stress test

description: Fatigue test for two types of ore samples, imaged fresh and after a certain number of stress cycles. Experiment is described in more detail eg. in Parian, M., Palsson, B.I., Kuva, J., XCT investigation on the generation of fatigue in autogenous grinding pebbles and its contribution to pre-weakening before fracture, IPMC conference, 2022. Preview dataset found at https://doi.org/10.23729/dad6164e-6faa-43a2-8bb1-577db10b9150 . To obtain data, please contact fairdata-pas@gtk.fi .
DOI: 10.21942/uva.10007840
title: The Amsterdam Ultra-high field adult lifespan database (AHEAD): A freely available multimodal 7 Tesla submillimeter magnetic resonance imaging database

description: The <strong>A</strong>msterdam Ultra-<strong>h</strong>igh fi<strong>e</strong>ld <strong>a</strong>dult lifespan<strong> d</strong>atabase (AHEAD) consists of 105 7 Tesla (T) whole-brain structural MRI scans tailored specifically to imaging of the human subcortex, including both male and female participants and covering the entire adult life span (19-80 yrs). Data was acquired at a submillimeter resolution using a single multi-echo magnetization-prepared rapid gradient echo (MP2RAGEME) sequence, resulting in complete anatomical alignment of quantitative, R<sub>1</sub>-maps, R<sub>2</sub><sup>*</sup>-maps, T<sub>1</sub>-maps, T<sub>1</sub>-weighted images, T<sub>2</sub><sup>*</sup>-maps, and quantitative susceptibility mapping (QSM). Probability maps were created for five individual basal ganglia structures.