cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/7mdfcs8f75.1
title: Benchmark instances for the multi-vehicle prize collecting arc routing for connectivity problem

description: This database consists of over 1,500 network instances that can be used to test exact methods, as well as heuristics and metaheuristics approaches to solve the Multi-vehicle Prize Collecting Arc Routing for Connectivity Problem (KPC-ARCP). The instances can be easily adapted to other road repair and restoration problems in the context of natural disasters, including the Arc Routing for Connectivity Problem (ARCP), Multi-vehicle Arc Routing for Connectivity Problem (K-ARCP), and Prize Collecting Arc Routing for Connectivity Problem (PC-ARCP). The instances were created in the context of two types of disasters: earthquakes and hurricanes, and they vary in terms of network size, intensity, and epicentre’s location.
DOI: 10.17632/prjvhd7wpb.1
title: The Appendix of the Graduation Thesis

description: The Appendix of the Study 2 in Chapter 2 and the Study 3 in Chapter 6
DOI: 10.17632/g2pbwnww8w.1
title: Spatial molecular anatomy of germ layers in the gastrulating Cynomolgus monkey embryo-Supplemental Materials

description: During mammalian embryogenesis, spatial regulation of gene expression and cell signaling are functionally coupled with lineage specification, patterning of tissue progenitors and germ layer morphogenesis. While the mouse model has been instrumental for understanding mammalian development, comparatively little is known about human and non-human primate gastrulation due to the restriction of both technical and ethical issues. Here, we present a spatial and temporal survey of the molecular dynamics of cell types populating the non-human primate embryos during gastrulation. We reconstructed three-dimensional digital models from serial sections of Cynomolgus monkey (Macaca fascicularis) gastrulating embryos at 1-day temporal resolution from E17 to E21. Spatial transcriptomics identifies gene expression profiles unique to the germ layers. Cross-species comparison reveals a developmental coordinate of germ layer segregation between mouse and primates, and species-specific transcription programs during gastrulation. These findings offer insights into evolutionarily conserved and divergent processes during mammalian gastrulation.
This Supplemental Materials containing Table S1-7, Supplementary file 1-10 and Supplementary video 1. They are also available at our website: http://sop.ccla.ac.cn.
DOI: 10.5281/zenodo.6779312
title: Dataset related to article "Epithelioid pleural mesothelioma is characterized by tertiary lymphoid structures in long survivors: results from the MATCH study"

description: This record contains data related to article “Epithelioid pleural mesothelioma is characterized by tertiary lymphoid structures in long survivors: results from the MATCH study”. The abstract is not yet available.
DOI: 10.5281/zenodo.6532035
title: Dataset related to article "Epithelioid pleural mesothelioma is characterized by tertiary lymphoid structures in long survivors: results from the MATCH study"

description: This record contains data related to article “Epithelioid pleural mesothelioma is characterized by tertiary lymphoid structures in long survivors: results from the MATCH study”. The abstract is not yet available.
DOI: 10.25835/cerz1jlb
title: Stoßschwinger

description: Ein Balken mit unilateral wirkenden Federn am freien Ende, die ein stückweise lineares Verhalten bei Stoßkontakt hervorrufen. Als Resultat existieren bei einer Anregungsfrequenz zwei koexistierende stabile Schwingungsantworten. Durch Manipulation von außen kann ein Zustandswechsel erzwungen werden, wie im Video gezeigt wird. Das Video sowie passend dazu die Animation im Zeitverlauf sind um Faktor 2 verlangsamt dargestellt.
DOI: 10.17632/s96r5f4j6r.2
title: Winter Fog Data Product for South Asia derived using satellite data

description: We are making available to the community a high resolution winter fog data record for South Asia derived using MODIS satellite observations. This data record results from our peer-reviewed publication in Remote Sensing of Environment, titled "Developing a long-term high-resolution winter fog climatology over south Asia using satellite observations from 2002 to 2020" (see citation at the bottom).

The fog dataset consists of two folders namely "Fog detection dataset 2020-21" and "Fog Droplet Size". The folder "Fog detection dataset 2020-21" contains daily data for night-time fog detection maps for the period 1 December 2020 - 31 January 2021 at ~1 km X 1 km spatial resolution over South Asia bounded by 70°E - 95°E, 20°N - 33°N. This dataset is derived from Aqua/MODIS infrared emissivity dataset. For the complete description of the dataset and detection algorithms, refer to our article "Developing a long-term high-resolution winter fog climatology over south Asia using satellite observations from 2002 to 2020", published in the journal "Remote Sensing of Environment". 

The dataset is in the geotiff format. Each entry in the data is 0, 1, or 100; where '0' indicates the absence of fog, '1' indicates the presence of fog and the '100' represents the unavailability of the data from MODIS. 

We also simulated the Cloud Effective Radius (CER) which is a representation of the night-time fog/low-stratus droplet size in micrometers. In case of no fog the value of CER is NaN and is represented by '-999'. The annual average (December-January) CER is included in the folder "Fog droplet size". 

Please cite our paper when using the fog dataset-

M. K. Singh and R. Gautam, 2022. "Developing a long-term high-resolution winter fog climatology over south Asia using satellite observations from 2002 to 2020". Remote Sensing of Environment 279, 113128. https://doi.org/10.1016/j.rse.2022.113128
DOI: 10.17632/3frz34jm2r.1
title: Visitation patterns of stingless bee (Tetragonula biroi) foraging on hot pepper (Capsicum annuum L.) flowers over time.

description: Sequence of flight distance of stingless bee (Tetragonula biroi) foraging on hot pepper (Capsicum annuum L.) flowers over time.

Relative frequency of flight distance of stingless bee (Tetragonula biroi) foraging on flowers of hot pepper (Capsicum annuum L.) with and without handling time.

Skewness of flight distance distribution of stingless bee (Tetragonula biroi) foraging on hot pepper (Capsicum annuum L.) flowers with and without handling time.

Visual pattern of flight distances of stingless bee (Tetragonula biroi) foraging on flowers of two adjacent hot pepper (Capsicum annuum L.) plants.
DOI: 10.18709/perscido.2022.06.ds369
title: CampusIoT anonymized LoRaWAN dataset

description: A dataset containing 130 million entries of LoRaWAN network logs produced by CampusIoT, including basic radio features and gateways' management messages (eg: official links between DevEUI and DevAddr). See the attached document for a more precise description of the fields available.
DOI: 10.5281/zenodo.6779331
title: Hu et al., 'The productivity of induced seismicity is controlled by injection fluid volume and preexisting faults in southern Sichuan Basin'

description: 1. Earthquake catalog:Earthquake catalogs within 2 kilometers of each platform (N5 and N7). The 10 columns from left to right are year, month, day, hour, minute, second, latitude, longitude, depth and magnitude. 2. Injection Volume of all wells:Fracturing injection volume per stage per horizontal well. The 4 columns from left to right are Serial number of well & pads, Fracturing section number, Fracturing time span and Total injection volume (m3). 3. The range of Spatiotemporal Association Filter (SAF):SAF vertex coordinates for six individual fracture well groups. The first column is the boundary of horizontal well trajectory and the boundary of Spatiotemporal Association Filter (SAF) from top to bottom. The second column is the names of the four vertices. Columns 3 through 12 show longitude and latitude for each well group, respectively. 4. Waveform Data:Waveforms of the selected earthquakes with focal mechanism solutions.
DOI: 10.5281/zenodo.6779330
title: Hu et al., 'The productivity of induced seismicity is controlled by injection fluid volume and preexisting faults in southern Sichuan Basin'

description: 1. Earthquake catalog:Earthquake catalogs within 2 kilometers of each platform (N5 and N7). The 10 columns from left to right are year, month, day, hour, minute, second, latitude, longitude, depth and magnitude. 2. Injection Volume of all wells:Fracturing injection volume per stage per horizontal well. The 4 columns from left to right are Serial number of well & pads, Fracturing section number, Fracturing time span and Total injection volume (m3). 3. The range of Spatiotemporal Association Filter (SAF):SAF vertex coordinates for six individual fracture well groups. The first column is the boundary of horizontal well trajectory and the boundary of Spatiotemporal Association Filter (SAF) from top to bottom. The second column is the names of the four vertices. Columns 3 through 12 show longitude and latitude for each well group, respectively. 4. Waveform Data:Waveforms of the selected earthquakes with focal mechanism solutions.
DOI: 10.17632/gtrd856zg8.1
title: Tectonic erosion and deep subduction in Central Tibet: Evidence from the discovery of retrograde eclogites in the Amdo microcontinent 

description: This data shows the composition of representative minerals and geochemical data from the retrograde eclogites in Amdo microcontinent, wchic can be used to constrain the P-T conditions of eclogite. This data also shows the isotopic data of zircon and rutile, which can be used to constrain the metamorphism age of Amdo eclogite.
DOI: 10.17632/tc9jt5c4mh.1
title: The importance of NOx control for peak ozone Using CMAQ-HDDM over YRD

description: The data in this file is for the manuscritpt entitled "The importance of NOx control for peak ozone mitigation based on a sensitivity study using CMAQ-HDDM-3D model during a typical episode over the Yangtze River Delta region, China" in  JGR-A journal.
DOI: 10.17632/yhmmg953vh.2
title: Evaluation of nutritional status and its associated factors in hemodialysis patients 

description: Background & Aims: Restriction of some nutrients, loss of nutrients through dialysis, and anorexia are the most critical factors affecting nutritional status in hemodialysis patients. This study aimed to determine the nutritional status and its associated factors in hemodialysis patients.
Methods: This cross-sectional study was performed on 220 hemodialysis patients who had been on dialysis for at least three months. The nutritional status was measured using three criteria: subjective global assessment (SGA), protein-energy wasting (PEW), and obesity criteria. Other nutritional indicators, such as food intake assessments, anthropometric measurements, and bioelectrical impedance analysis (BIA) were also applied.
Results: The prevalence of protein-energy wasting was 78.2% (95% CI 72.74-83.66), and 22.7% (CI 95% 17.16-28.24) based on SGA (mild malnutrition) and PEW, respectively. The prevalence of obesity was 77.3% (CI 95% 71.76-82.84). According to PEW, about 18.8% of obese people (n = 64) were malnourished. Quality of life was not correlated with any criteria; SGA, PEW, and obesity. Protein (kcal / day) and energy (kcal / day) had a negative correlation with obesity (r = -0.81 and p = 0.042 r = -0.094 and p = 0.089, respectively).
Conclusion: The prevalence of protein-energy malnutrition and obesity in hemodialysis patients in Urmia can differ according to the criteria that we choose to assess nutritional status. A relatively large population of hemodialysis patients studied has a nutritional deficiency, necessitating the need for nutritional counseling in these patients.
DOI: 10.17632/ndtr6vbn59.1
title: Relationship between postvoid residual volume and peak flow rate in men with symptomatic benign prostatic enlargement

description: This data describes findings from a cross-sectional study of men 40years and above who presented to hospital over a period of 12months with lower urinary tract symptoms attributable to benign prostate enlargement. The variables of interest include age at presentation, International Prostate Symptom Score (IPSS), Postvoid Residual Urine (PVR) and Peak Flow Rate (QMax).
DOI: 10.17632/ysv6jgnhrx.1
title: Life-long dietary restriction ameliorates aging-related renal fibrosis via normalizing mitochondrial functions and autophagy

description: Backgrounds: During the progression of renal aging, a gradually changes in structures and functions of mitochondria are noticed. Dietary restriction (DR) displays a protective role on aging associated renal decline, however, the exact mechanisms involved is still unclear. The aim of present study is to elucidate whether life-long DR delays renal aging, and explores the potential mechanisms regarding mitochondrial homeostasis.
Methods and Results: Eight-week-old C57BL/6 male mice (n=30) were randomly divided into three groups, Young-AL (AL, ad libitum), Aged-AL, and Aged-DR (60% intake of AL). Mice were sacrificed at the age of 7 months (Young) or 20 months (Aged). Heavier weights of body and kidney were accompanied with aging, and DR declined these increases in aged mice. Aging caused extensive tubulointerstitial fibrosis and glomerulosclerosis in kidney. Giant mitochondria with looser and irregular crista were observed in Aged-AL kidney. DR retarded these morphological alterations in aged kidney. In addition, DR reversed the increase of MDA and the decrease of ATP caused by aging. Mitochondrial-related proteins were analyzed to elucidate their involvements. Aging downregulated the renal expressions of VDAC, FOXO1, SOD2, LC3I and II, and upregulated the renal expressions of MFN2 and PINK1. While DR elevated the expressions of VDAC, FOXO1 and LC3I, and reduced the ratio of LC3II to LC3I in aged kidney. 
Conclusion: Energy deficit, increased oxidative stress and severe fibrosis were noticed in the aged kidney, and DR ameliorated these damages during aging via increasing functional mitochondria, promoting autophagic clearance and reducing oxidative stress.
DOI: 10.17632/px4j8j3bc4.1
title: LINF_290030700

description: ubiquitin hydrolase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/3hswxj5nff.1
title: Leaf spectra of four broadleaved deciduous tree species in Finland

description: This dataset contains measurements of leaf reflectance and transmittance spectra of four broadleaved deciduous tree species from Southern Finland. The measurements were conducted between 8th and 23rd June 2022, when the leaves were fully developed.

The sampled tree species were common aspen (Populus tremula L.), goat willow (Salix caprea L.), grey alder (Alnus incana (L.) Moench) and common alder (Alnus glutinosa (L.) Gaertn.). The trees grew in forests. Branches were detached from the trees using scissors attached to a telescope bar. Altogether, 48 branches were sampled per species: six branches from each of the eight sample trees per species. Three branches per tree were sampled from the upper (i.e., sunlit) part of the crown and three from the lower (i.e., shaded or partly shaded) part of the crown. One healthy green leaf was selected in a systematic way from each branch. Leaf directional-hemispherical reflectance and transmittance were measured both from the adaxial (upper) and abaxial (lower) side of each sample leaf. The height and diameter at breast height (1.3 m) were recorded from each tree. 

If you use this dataset, please cite:
Kuusinen, N., Lakaniemi, E., Hovi A., Rautiainen, M. 2022. Leaf spectra of four broadleaved deciduous tree species in Finland. Mendeley Data, V1, doi: 10.17632/3hswxj5nff.1.

The collection of the data is described in Data_description.pdf. Comma separated (csv) files named as reflectance_adaxial.csv, reflectance_abaxial.csv, transmittance_adaxial.csv and transmittance_abaxial.csv contain reflectance spectra of the adaxial and abaxial leaf sides and transmittance spectra of the adaxial and abaxial leaf sides, respectively, in wavelength range 350-2500 nm. samples.csv contains information for each sample as explained in Data_description.pdf.
DOI: 10.17632/wcyh52v3km.1
title: Solid dispersions review

description: This file contains articles focused on solid dispersion technology and drug solubility enhancement. The hypothesis is that these systems are not only able to enhance biopharmaceutical properties, but also improve the pharmaceutics and drug dosage performance as well.
DOI: 10.17632/nvn5spksw8.1
title: Mass Spectrometry Data

description: Raw data of mass spectrometry for identification of protein targets of Gli-233 and Gli-55 aptamers specific to glioma.
DOI: 10.17632/d2d9vmzxn4.1
title: Dental radiography findings

description: Information on clinical symptoms, findings, and diagnostic yield of dental radiographs in south eastern nigeria over a 2 year period.
DOI: 10.17632/y86zw65jjw.1
title: LINF_290030800

description: enoyl-CoA hydratase/isomerase-like protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/y5nmzxkcdz.1
title: LINF_290030900

description: mitogen-activated protein kinase kinase 1 | MKK1
Leishmania infantum (strain JPCM5)
DOI: 10.5281/zenodo.6779347
title: Glacier types of the Mont Blanc massif

description: This is a new glacier inventory for the Mont Blanc massif digitized on high-resolution images. The inventory divides glaciers into different classes commonly known to glaciologists and geomorphologists.
DOI: 10.5281/zenodo.6779346
title: Glacier types of the Mont Blanc massif

description: This is a new glacier inventory for the Mont Blanc massif digitized on high-resolution images. The inventory divides glaciers into different classes commonly known to glaciologists and geomorphologists.
DOI: 10.17632/gm3g8wtty6.1
title: LINF_290031100

description: Nucleosome assembly protein (NAP)
Leishmania infantum (strain JPCM5)
DOI: 10.17632/rp654cw6fx.2
title: Data for: Spatial Coincidence between Mining Activities and Protected Areas of Giant Panda Habitat: the Geographic Overlaps and Implications for Conservation

description: Polygon shapefiles for this study
DOI: 10.17632/f844ccgr9m.1
title: Winter wheat under a water shortage environment: A dataset of yield formation parameters and above-ground biomass of twenty European genotypes

description: The datasets presented in this data article are raw data and supporting material for the study “Yield formation parameters of selected winter wheat genotypes in response to water shortage,” available at: https://doi.org/10.3390/agronomy12040831. Twenty European winter wheat genotypes differing in their countries of origin were grown in a potted experimental design under ambient weather conditions in the vegetation hall (warm temperate climatic zone of Brno, Czech Republic) until their transfer to the phenotyping platform of a PlantScreenTM Modular System at Photon Systems Instruments, Ltd. (Drásov, Czech Republic) to simulate natural continual drying, as common during drought spells. The pots were divided into two categories: (i) drought-stress (continual drying of plants until 15% of the maximum soil water capacity [SWC], corresponding to the permanent wilting point) and (ii) control (plants were maintained at 70% of SWC) treatments that were applied from the beginning of stem elongation (DC 30; Zadoks decimal codes) to the grain development stage (DC 73–75). When 15% of the maximum SWC was reached in drought-stress treatments (after 32 days; equal to the DC 61–65 developmental stages), the experiment was terminated, and the drought-stressed plants were irrigated to 70% of SWC followed by 17 days of recovery. The plants were transported back to the vegetation hall after 49 days (at developmental stages DC 73–75). The responses of the genotypes to the different water treatments were evaluated by final yield formation parameters for main spikes at the fully ripe stage (DC 92) when all parts of the above-ground biomass of the plants were manually harvested and dried for 12 hours at 105 °C. The datasets can be implemented into crop growth models to improve predictions of future winter wheat production under changing climatic conditions and can contribute to decision-making processes during genotype selection for drought-prone cultivation areas. Raw data of above-ground biomass for main spikes of twenty European winter wheat genotypes are presented in Table 1. The relative drought-induced reductions/increases are presented in Table 2. The results of one-way ANOVAs with Tukey's post-hoc test (α = 0.05, n ≥ 4) for each yield formation parameter within the drought-stress/control treatments are presented in Table 3.
DOI: 10.17632/y9cw3xt8pf.1
title: LINF_290032200

description: heat shock protein 20 | HSP20
Leishmania infantum (strain JPCM5)
DOI: 10.17632/d26rvwvsg9.1
title: LINF_290032100

description: 3’5’-cyclic nucleotide phosphodiesterase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/n7gps8fp4w.1
title: LINF_290031500

description: kinesin
Leishmania infantum (strain JPCM5)
DOI: 10.17632/2zpftt7yrx.1
title: LINF_290031300

description: aspartyl aminopeptidase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/dvvnxg7nvh.1
title: Identification of bioactive compounds and cytogenotoxicity of the essential oil from the leaves of Croton heliotropiifolius Kunth.

description: Croton heliotropiifolius Kunth, popularly known as “quince” and “velame”, has a high concentration of volatile oils in the leaves, and is widely used in folk medicine. The objectives of this work were to identify the phytochemical compounds and analyze the cytogenotoxicity of the essential oil from the leaves of C. heliotropiifolius Kunth. The oil was extracted by hydrodistillation and the phytochemical profile was detected by gas chromatography and mass spectrometry. In the toxicogenetics analysis, Allium cepa roots were exposed to 1% Dimethylsulfoxide and Methylmethanesulfonate (MMS, 10µg/mL), negative and positive controls, respectively, and to C. heliotropiifolius oil at six concentrations (0.32; 1.6; 8; 40; 200 and 1000 mg/L). The phytochemical profile showed 40 chromatographic bands, and 33 compounds were identified. α-pinene (16.70%) and 1,8-cineole (13.81%) were identified as the majority. Some of these identified secondary metabolites have biological and pharmacological activities already studied as antiseptic, insecticide, viricidal, fungicidal, analgesic, sedative, and anti-inflammatory, among others. In the A. cepa test, oil cytotoxicity was observed at concentrations of 0.32, 1.6, and 200 mg/L and genotoxicity at 200 and 1000 mg/L with micronuclei and significant chromosomal losses. Based on the results presented here, it can be concluded that the essential oil of C. heliotropiifolius leaves has monoterpene hydrocarbons, and oxygenated monoterpenes, sesquiterpenes, and oxygenated sesquiterpenes, in addition to having a cytotoxic and genotoxic effect on A. cepa cells.
DOI: 10.17637/rh.19398293
title: English Channel PNM Output and Analyses

description: Raw pore network model output and statistical analyses for the accompanying article.<br>- analysis.py - This Python script uses the data found in the accompanying folders to perform statistical analyses and generate the figures found in the main article. - overall_XX_poro_perm.csv - These files include the porosity and permeability measurements made in this study (EC) and the studies referenced within the text for which these data are readily available to download. - XX_PNM_Outputs - These folders contain CSV files with the raw output from pore network model measurements made using PerGeos as described in the accompanying article.