cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.25845565.v1
title: EK-5G

description: EK-5G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EK-5G:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>5: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845571
title: EA-5G

description: EA-5G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EA-5G:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>A: Represents timepoint 2, indicating sampling before C. difficile infection.<br>5: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845571.v1
title: EA-5G

description: EA-5G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EA-5G:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>A: Represents timepoint 2, indicating sampling before C. difficile infection.<br>5: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845574.v1
title: EK-2G

description: EK-2G investigates the impact of Ldifferent treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EK-2G:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>2: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845577
title: AK-3B

description: AK-3B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AK-3B:<br>A: Denotes the control group.<br>C: Represents timepoint 2, indicating sampling after PBS.<br>3: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845577.v1
title: AK-3B

description: AK-3B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AK-3B:<br>A: Denotes the control group.<br>C: Represents timepoint 2, indicating sampling after PBS.<br>3: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.60712/si-id158634.1
title: StrainInfo SI-ID 158634.1

description: StrainInfo dataset 158634 about a strain of Gloniopsis praelonga. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id158635.1
title: StrainInfo SI-ID 158635.1

description: StrainInfo dataset 158635 about a strain of Leptographium verrucosum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845574
title: EK-2G

description: EK-2G investigates the impact of Ldifferent treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EK-2G:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>2: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845580
title: GC-3Y

description: GC-3Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GC-3Y:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845580.v1
title: GC-3Y

description: GC-3Y investigates the impact of Lactobacillus acidophilus treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample GC-3Y:<br>G: Denotes the strain ST-104 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>Y: Indicates the treatment administered, which in this case is Lactobacillus acidophilus.
DOI: 10.6084/m9.figshare.25845583
title: DK-6G

description: DK-6G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DK-6G:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>6: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845586
title: DA-3P

description: DA-3P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DA-3P:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.6084/m9.figshare.25845586.v1
title: DA-3P

description: DA-3P investigates the impact of Lactobacillus paracasei treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DA-3P:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>3: Refers to the specific mouse number under investigation.<br>P: Indicates the treatment administered, which in this case is Lactobacillus paracasei.
DOI: 10.60712/si-id158636.1
title: StrainInfo SI-ID 158636.1

description: StrainInfo dataset 158636 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845583.v1
title: DK-6G

description: DK-6G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample DK-6G:<br>D: Denotes the strain ST-4 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>6: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845589
title: AA-4G

description: AA-4G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AA-4G:<br>A: Denotes the control group.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>3: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845589.v1
title: AA-4G

description: AA-4G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AA-4G:<br>A: Denotes the control group.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>3: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845592
title: CK-3B

description: CK-3B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample CK-3B:<br>C: Denotes the strain ST-2 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>3: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845592.v1
title: CK-3B

description: CK-3B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample CK-3B:<br>C: Denotes the strain ST-2 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>3: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845595.v1
title: EC-4B

description: EC-4B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EC-4B:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>4: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.60712/si-id158637.1
title: StrainInfo SI-ID 158637.1

description: StrainInfo dataset 158637 about a strain of Coemansia furcata. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845595
title: EC-4B

description: EC-4B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EC-4B:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>C: Represents timepoint 2, indicating sampling after C. difficile infection.<br>4: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845601
title: AA-1G

description: AA-1G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AA-1G:<br>A: Denotes the strain control group.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>1: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845604
title: EK-4B

description: EK-4B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EK-4B:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>4: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.<br>
DOI: 10.6084/m9.figshare.25845607
title: EK-2B

description: EK-2B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EK-2B:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>2: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845607.v1
title: EK-2B

description: EK-2B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EK-2B:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>2: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.60712/si-id158470.1
title: StrainInfo SI-ID 158470.1

description: StrainInfo dataset 158470 about a strain of Penicillium flavigenum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.6084/m9.figshare.25845601.v1
title: AA-1G

description: AA-1G investigates the impact of different treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AA-1G:<br>A: Denotes the strain control group.<br>A: Represents timepoint 1, indicating sampling before C. difficile infection.<br>1: Refers to the specific mouse number under investigation.G: Indicates the treatment administered, which in this case without treatment.
DOI: 10.6084/m9.figshare.25845604.v1
title: EK-4B

description: EK-4B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample EK-4B:<br>E: Denotes the strain ST-37 of Clostridioides difficile.<br>K: Represents timepoint 3, indicating sampling after treatment.<br>4: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.<br>
DOI: 10.6084/m9.figshare.25845610
title: AC-3B

description: AC-3B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AC-3B:<br>A: Denotes the control group.<br>C: Represents timepoint 2, indicating sampling after PBS.<br>3: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.
DOI: 10.6084/m9.figshare.25845610.v1
title: AC-3B

description: AC-3B investigates the impact of Bifidobacterium bifidum treatment on the gut microbiota in Clostridioides difficile infection. Fecal samples from mice post-infection were processed using Invitrogen with sequencing on the Ion Torrent NGS System. Analysis via Ion Reporter SW (16S) revealed shifts in microbial taxa dynamics over days 1, 3, and 6, shedding light on the potential of probiotics in modulating gut microbiota during C. difficile infection.The identification of the sample AC-3B:<br>A: Denotes the control group.<br>C: Represents timepoint 2, indicating sampling after PBS.<br>3: Refers to the specific mouse number under investigation.<br>B: Indicates the treatment administered, which in this case is Bifidobacterium bifidum.