cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c54x1f
title: MassIVE MSV000084681 - GNPS_Isotopically Labeled Bile Acid Gavage Experiment
title: LC-MS/MS data were collected for liver, small intestine, and colon samples from mice fed normal chow or protein restricted diet and gavaged with one of three isotopically labeled bile acids.
DOI: 10.5281/zenodo.3571195
title: High-density Chemical Cross-linking for Modeling Protein Interactions

description: Supporting parameters, IMP code and data for Mintseris & Gygi "High-density Chemical Cross-linking for Modeling Protein Interactions" <em>PNAS</em> <strong>Parameter Files</strong> These parameter files were used for running PIXL to produce the data described in the paper <strong>Fasta Sequence Databases</strong> These sequence databases were used for running PIXL to produce the data described in the paper <strong>IMP</strong> Code, intermediate data, and final localization densities for IMP proteasome modeling as described in the paper See IMP directory README
DOI: 10.5281/zenodo.3571196
title: High-density Chemical Cross-linking for Modeling Protein Interactions

description: Supporting parameters, IMP code and data for Mintseris & Gygi "High-density Chemical Cross-linking for Modeling Protein Interactions" <em>PNAS</em> <strong>Parameter Files</strong> These parameter files were used for running PIXL to produce the data described in the paper <strong>Fasta Sequence Databases</strong> These sequence databases were used for running PIXL to produce the data described in the paper <strong>IMP</strong> Code, intermediate data, and final localization densities for IMP proteasome modeling as described in the paper See IMP directory README
DOI: 10.17632/9kk56t3gjh.1
title: Data for: Platelet-to-lymphocyte ratio is associated with cardiovascular disease in continuous ambulatory peritoneal dialysis patients

description: This is the inflammation-related data of 70 patients with CAPD in our center.
DOI: 10.5519/qd.msynlh2k
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1341414 records)
DOI: 10.5281/zenodo.3572835
title: Quantifying Fatigue-Damage and Failure-Precursors using Ultrasonic Coda Wave Interferometry

description: Data sets for the Publication "Quantifying Fatigue-Damage and Failure-Precursors using Ultrasonic Coda Wave Interferometry".
DOI: 10.25345/c5168x
title: MassIVE MSV000084682 - GNPS_Isotopically Labeled Bile Acids Gavage Experiment
title: LC-MS/MS data were collected for liver, small intestine, and colon samples from mice fed normal chow or protein restricted diet and gavaged with one of three isotopically labeled bile acids.
DOI: 10.6073/pasta/4c6f448b98be6aa1b33d2115288c4684
title: Desert Fertilization Experiment: investigation of Sonoran desert ecosystem response to atmospheric deposition and experimental nutrient addition, ongoing since 2006

description: Launched in 2006 with support from the National Science Foundation (NSF) and leveraged by the CAP LTER, the Carbon and Nitrogen deposition (CNdep) project sought to answer the fundamental question of whether elemental cycles in urban ecosystems are qualitatively different from those in non-urban ecosystems. Ecosystem scientists, atmospheric chemists, and biogeochemists tested the hypothesis that distinct biogeochemical pathways result from elevated inorganic nitrogen and organic carbon deposition from the atmosphere to the land. To test the hypothesis, scientists examined the responsiveness of Sonoran desert ecosystems to nutrient enrichment by capitalizing on a gradient of atmospheric deposition in and around the greater Phoenix metropolitan area. Fifteen desert study sites were established, with five locations each west and east of the urban core, and in the urban core in desert preserves. In addition to the gradient of atmospheric deposition in and around the urban core, select study plots at each of the fifteen desert locations receive amendments of nitrogen, phosphorus, or nitrogen + phosphorus fertilizer. Measured variables include soil properties, perennial and annual plant growth, and atmospheric deposition of nitrogen. At the close of the initial grant period, the CAP LTER assumed responsibility for the project, renamed the Desert Fertilization Experiment, which provides a remarkable platform to study the long-term effects of nutrient enrichment on ecosystem properties.
DOI: 10.17036/researchdata.aston.ac.uk.00000451
title: Effects of receptor component protein on family B GPCRs
DOI: 10.5281/zenodo.3572240
title: Simulations of crowded membranes

description: Nine simulations, each with nine copies of a single protein (1–7,A,B) and 50 DPPC lipids per protein per leaflet. The simulations are performed using the coarse-grained Martini model with scaled-down protein–protein interactions. These systems are described carefully in: M. Javanainen, H. Martinez-Seara, R. Metzler, and I. Vattulainen; Diffusion of Integral Membrane Proteins in Protein-Rich Membranes. J. Phys. Chem. Lett., 2017, 8 (17), pp 4308–4313, DOI: 10.1021/acs.jpclett.7b01758 The topologies for proteins A&B are included in this upload, whereas other ones can be obtained from: https://doi.org/10.5281/zenodo.846428
DOI: 10.5281/zenodo.3572241
title: Simulations of crowded membranes

description: Nine simulations, each with nine copies of a single protein (1–7,A,B) and 50 DPPC lipids per protein per leaflet. The simulations are performed using the coarse-grained Martini model with scaled-down protein–protein interactions. These systems are described carefully in: M. Javanainen, H. Martinez-Seara, R. Metzler, and I. Vattulainen; Diffusion of Integral Membrane Proteins in Protein-Rich Membranes. J. Phys. Chem. Lett., 2017, 8 (17), pp 4308–4313, DOI: 10.1021/acs.jpclett.7b01758 The topologies for proteins A&B are included in this upload, whereas other ones can be obtained from: https://doi.org/10.5281/zenodo.846428
DOI: 10.5281/zenodo.3572586
title: Stanford Hopkin Marine Laboratory Shallow Water Pressure Observations

description: Bottom-mounted pressure observations deployed along Hopkins Marine Laboratory. Pressure data were converted to wave characteristics. This is for manuscript <strong>Nearshore wave transformation over a rocky reef shoreline by Gon, Thornton, MacMahan</strong>
DOI: 10.17632/d88f454t2v.1
title: Data for: Deep-sea benthic foraminifera record of the last 1500 years in the North Aegean Trough (northeastern Mediterranean): a paleoclimatic reconstruction scenario

description: Appendix A: Benthic Foraminifera species list Appendix B: Benthic foraminifera absolute abundances vs. depth and age
DOI: 10.5281/zenodo.3572587
title: Stanford Hopkin Marine Laboratory Shallow Water Pressure Observations

description: Bottom-mounted pressure observations deployed along Hopkins Marine Laboratory. Pressure data were converted to wave characteristics. This is for manuscript <strong>Nearshore wave transformation over a rocky reef shoreline by Gon, Thornton, MacMahan</strong>
DOI: 10.13140/rg.2.2.10334.59209
title: Reference polygons - Hyla arborea distribution
DOI: 10.5281/zenodo.3572177
title: Wikidata Dump

description: RDF dump of wikidata produced with wdumps. <br> View on wdumper <b>entity count</b>: 0, <b>statement count</b>: 0, <b>triple count</b>: 0
DOI: 10.5281/zenodo.3572178
title: Wikidata Dump

description: RDF dump of wikidata produced with wdumps. <br> View on wdumper <b>entity count</b>: 0, <b>statement count</b>: 0, <b>triple count</b>: 0
DOI: 10.17632/85vtm52jsm.1
title: Supplementary Material for the article: Geologic map, morphologies and textures of the late Eocene-Oligocene Nanchititla dike swarm, eastern Michoacán, México

description: Radiometric and geologic data of the Nanchititla dike swarm. Photographs of rock textures.
DOI: 10.17632/8kk7xyk53m.1
title: An internet-based survey study of hidradenitis suppurativa patients: use of the internet for disease-related information

description: After IRB exemption from Wayne State University, a survey was developed and posted in the Reddit website’s “Hidradenitis” forum and in the “Hidradenitis Suppurativa” Facebook group from April to May 2019.
DOI: 10.17632/927swrzf2x.1
title: Related to the Cell Reports paper CELL-REPORTS-D-19-02836R1

description: Original data for Cell Reports paper CELL-REPORTS-D-19-02836R1
DOI: 10.15468/ygfgf7
title: Taxonomic Studies on the Genus Myrmoteras Forel (Hymenoptera: Formicidae), with Description of Two New Species from India

description: This dataset contains the digitized treatments in Plazi based on the original journal article Bharti, Himender, Akbar, Shahid Ali (2014): Taxonomic Studies on the Genus Myrmoteras Forel (Hymenoptera: Formicidae), with Description of Two New Species from India. J. Entomol. Res. Soc. 16 (2): 71-80, DOI: http://doi.org/10.5281/zenodo.3573588
DOI: 10.17632/xbt7scz5ny.1
title: PCSTCOL: Power consumption data from an area of southern Colombia

description: We introduce a dataset concerning electric-power consumption-related features registered in seven main municipalities of Nariño, Colombia, from December 2010 to May 2016. The dataset consists of 4427 socio-demographic characteristics, and 6 power-consumption-referred measured values. Data were fully collected by the company Centrales Eléctricas de Nariño (CEDNEAR) according to the client consumption records. Power consumption data collection was carried following a manual procedure wherein company workers are in charge of manually registering the readings (measured in kWh) reported by the electric energy meters installed at each housing/building. Released data set is aimed at providing researchers a suitable input for designing and assessing the performance of forecasting, modelling, simulation and optimization approaches applied to electric power consumption prediction and characterization problems.
DOI: 10.5523/bris.1jj0fszzrx9qf2ldcz654qp454
title: Data from whole-cell modelling (12-2019)
title: Minimal Genome Design Algorithms using whole-cell models Rees-Garbutt and Chalkley et al 2019

description: In the future, entire genomes tailored to specific functions and environments could be designed using computational tools. However, computational tools for genome design are currently scarce. Here we present algorithms that enable the use of design-simulate-test cycles for genome design, using genome minimisation as a proof-of-concept. Minimal genomes are ideal for this purpose as they have a simple functional assay whether the cell replicates or not. We used the first (and currently only published) whole-cell model for the bacterium Mycoplasma genitalium. Our computational design-simulate-test cycles discovered novel in-silico minimal genomes which, if biologically correct, predict in-vivo genomes smaller than JCVI-Syn3.0; a bacterium with, currently, the smallest genome that can be grown in pure culture. In the process, we identified 10 low essential genes and produced evidence for at least two Mycoplasma genitalium in-silico minimal genomes. This work brings combined computational and laboratory genome engineering a step closer.
DOI: 10.17632/yzbcvdnh2m.1
title: Dataset on Chemical structure of hydrolysates of cereulide and their time course profile

description: The data provided in this article supplements the data information provided in “Chemical structure of hydrolysates of cereulide and their time course profile”. The generation of the data considered synthesis procedure of depsipeptides and elucidation of natural products using HPLC-TOFMS. Hydrolysates of cereulide which is an emetic toxin were found in the broth of Bacillus cereus. Two tetradepsipeptides and two dodecadepsipeptides which were cleaved ester bond of cereulide, were synthesized using liquid phase fragment condensation method starting from commercially available amino acids. The chemical structure of hydrolysates was verified tetradepsipeptide L-O-Val-L-Val-D-O-Leu-D-Ala and dodecadepsipeptide (D-O-Leu-D-Ala-L-O-Val-L-Val)3 using LC-TOFMS. Quantitative analysis revealed the time course profile of cereulide production and degradation. Production in the stationary phase and decomposition in the death phase of cereulide were revealed. The increase in tetradepsipeptide continued after the stationary phase until decomposition occurred.
DOI: 10.17632/kwt427y4b5.2
title: Apéndice del manuscrito: "Conservación en la ciudad: ¿Cómo influye la estructura del hábitat sobre la abundancia de especies de aves en una metrópoli Latinoamericana?

description: Apéndice del manuscrito: "Conservación en la ciudad: ¿Cómo influye la estructura del hábitat sobre la abundancia de especies de aves en una metrópoli Latinoamericana?" Javiera F. Benito, Martín A. H. Escobar & Nélida R. Villaseñor , publicado en Gayana 83: 37-48. Selección de los mejores Modelos Lineales Generalizados para la abundancia de ocho especies de aves.
DOI: 10.17632/rrfh7yv2g5.1
title: Transcriptomics of elite inbred lines and their hybrids

description: raw sequence data of transcriptome
DOI: 10.6073/pasta/0a0dd6bb9680667ca52a71868b5c2019
title: Biogenic silica standing stock and its rate of production and export in the offshore Southern California Current Ecosystem, 2011 - 2016

description: Here we report the complete results of a study on the cycling of biogenic silica (bSiO2) during the P1106 CCE Long Term Ecological Research process cruise examining process related to offshore fronts. Concentrations of bSiO2 varied by 25-fold across the front, with concentrations in frontal waters 20–25% of those in coastal waters. Rates of biogenic silica production spanned an equally large range, with rates within the frontal region that were half those in the coastal regions. The results suggest that the regions of frontal interactions between eddies in the southern CCE can account for variability in diatom biomass, productivity and export over very short spatial scales that is comparable to the variability observed across the Pacific basin.
DOI: 10.17632/2jpg54nvsc.3
title: Data for : Mantle and recycled oceanic crustal components in mantle xenoliths from northeastern China and their mantle sources (2019JB018232)

description: Geochemical data for mantle xenoliths hosted by Cenozoic basalts in northeastern China. The data include mineral and rock chemistry, in situ isotopic compositions of Sr in clinopyroxene and O in olivine.
DOI: 10.17632/5mt4vjxztr.1
title: A conserved kinase-based body temperature sensor globally controls alternative splicing and gene expression

description: Unprocessed images for: A conserved kinase-based body temperature sensor globally controls alternative splicing and gene expression
DOI: 10.17632/7x3gxj5b5s.1
title: Data for "How much does the increase in multiples explain the recent increase in low birth weight in South Korea?"

description: Data for "How much does the increase in multiples explain the recent increase in low birth weight in South Korea?"
DOI: 10.17632/95bv4m7t8j.1
title: Customers behavior intention toward blockchain-based applications

description: Testing customer behavior on blockchain-based cryptocurrency transaction application by merging TAM model with five new constructs
DOI: 10.17632/47nknnw666.1
title: TQT studies results

description: The TQT database is a collection of published Thorough QT studies results on different compounds, with the detailed description of study design, pharmacokinetic and pharmacodynamic endpoints. The information provided can be utilized to assess the predictive performance of different preclinical biomarkers for QT prolongation effect and for other modelling purposes thus can be useful for pharmaceutical industry researchers as well as for scientist working on in silico modelling of cardiac risk.
DOI: 10.17632/p8t3wxbs2r.2
title: Data for: Statistical and Geostatistical Spatial and Temporal Variability of Physico-Chemical Parameters, Nutrients, and Contaminants in the Tenango Dam, Puebla, Mexico.

description: The database contains information related to environmental variables of the Tenango dam, Puebla, 2015.
DOI: 10.17632/x5br9mp729.2
title: Data: Trends and Hot Topics in Gamification in Education- a bibliometric analysis from 1953 to 2019

description: Bibliometric analysis is an approach to analyse academic literatures based on metrics such as citations. The software HistCite helps reveal the top leading scholars, the journals in the target field, the most cited documents, key words, numbers of yearly output, document types of the published documents, language, institutions contributing in the field, and countries of the authors in the given field. The software HistCite also generates historiography which presents the relationships among the most highly cited articles.
DOI: 10.17909/t9-13te-fp08
title: HST GO-14241 Direct Imaging Observations of HD106906b

description: These data are for time-resolved direct-imaging observations of planetary-mass companion HD106906b. The time-resolved photometry results are used in a paper titled "Cloud Atlas: High-precision HST/WFC3/IR Time-Resolved Observations of Directly-Imaged Exoplanet HD106906b". The abstract of the paper is attached here: HD106906b is an ~11 M_Jup, ~15 Myr old directly-imaged exoplanet orbiting at an extremely large distance from its host star. The wide separation (7.11 arcsec) between HD106906b and its host star greatly reduces the difficulty in direct-imaging observations, making it one of the most favorable directly-imaged exoplanets for detailed characterization. In this paper, we present HST/WFC3/IR time-resolved observations of HD106906b in the F127M, F139M, and F153M bands. We have achieved ~1% precision in the lightcurves in all three bands. The F127M lightcurve demonstrates marginally-detectable (2.7 sigma significance) variability with a best-fitting period of 4 hr, while the lightcurves in the other two bands are consistent with flat lines. We construct primary-subtracted deep images and use these images to exclude additional companions to HD106906 that are more massive than 2 M_Jup and locate at projected distances for more than 700 au. We measure the astrometry of HD106906b in two HST/WFC3 epochs and achieve precisions better than 2.5 mas. The position angle and separation measurements do not deviate from those in the 2004 HST/ACS/HRC images for more than 1 sigma uncertainty. We provide the HST/WFC3 astrometric results for 25 background stars that can be used as reference sources in future precision astrometry studies. Our observations also provide the first 1.4 micron water band photometric measurement for HD106906b. Fitting HD106906b's spectral energy distribution to the BT-Settl model shows that the model over-predicts the HD106906b's water absorption depth and the best-fitting value for log g is inconsistent with previous low to intermediate surface gravity assessment. These inconsistencies highlight the challenges in modeling atmospheres of young planetary-mass objects.
DOI: 10.5281/zenodo.3458558
title: RECAP Artificial Data Traces

description: The objective of the work package "Data Collection, Visualization and Analysis" of RECAP is to provide the necessary tools for managing and refining the data needed for the rest of the work packages. This includes the collection as well as the generation of data. Within this work package, the task of Artificial Workload Generation is responsible for the generation of a collection of datasets with artificial workloads, that complement the real data traces collected from industrial partners. Moreover, because publicly available workload data is scarce we provide the data as public data sets. This document is a companion report to deliverable which is of type “dataset”. The aim of the report is to describe the collection of datasets that constitute D5.3 and the mathematical techniques (structural time series models, generative adversarial networks, and workload based on traffic propagation) by which one can artificially generate and/or augment such datasets. The datasets described include real data traces collected by industrial partners and artificial data traces generated by the use of statistical models and neural networks. Each published data set can be used by the scientific and industrial community as a starting point for the modelling and experimental validation of distributed edge and cloud applications, facilitating the repeatability of the results.
description: For details on the data itself, see RECAP-Artificial Workload Generation.pdf
DOI: 10.17632/s433v98tby.1
title: Drought induced soil desiccation cracking behavior with consideration of basal friction and layer thickness

description: All the original data related to the tables and figures in this study
DOI: 10.25625/6aaoa8
title: Greenhouse gas flux measurements in oil palm plantation

description: This data set summarizes greenhouse gas measurements of carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) in a 1-year old and in a 12-year old oil palm (Elaeis guineensis Jacq.) plantation.
DOI: 10.25625/6aaoa8/ghtuyh
title: Meijide_et_al_NatComm_UploadDataRepository_AM.xlsx

description: This data set summarizes greenhouse gas measurements of carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) in a 1-year old and in a 12-year old oil palm (Elaeis guineensis Jacq.) plantation.
DOI: 10.14457/stou.the.2017.72
title: การพัฒนาวัสดุดูดซับไอระเหยสารโทลูอีนจาก ถ่านกะลามะพร้าวและถ่านกะลาปาล์ม
DOI: 10.14457/stou.the.2017.73
title: ผลการจัดการเรียนรู้แบบสืบเสาะหาความรู้ร่วมกับการใช้แบบจำลองเป็นฐาน เรื่อง บรรยากาศ ที่มีต่อผลสัมฤทธิ์ทางการเรียนวิทยาศาสตร์และ ความคิดสร้างสรรค์ของนักเรียนชั้นมัธยมศึกษาปีที่ 1 จังหวัดปัตตานี
DOI: 10.14457/stou.the.2017.74
title: ผลการจัดการเรียนรู้แบบสืบเสาะหาความรู้ที่บ่งชี้ธรรมชาติของวิทยาศาสตร์ เรื่อง สารละลาย ที่มีต่อความเข้าใจธรรมชาติของวิทยาศาสตร์และความสามารถในการคิดวิเคราะห์ของนักเรียนชั้นมัธยมศึกษาปีที่ 1 โรงเรียนขามแก่นนคร จังหวัดขอนแก่น
DOI: 10.14457/stou.the.2017.75
title: ผลการใช้หนังสืออ่านเพิ่มเติม เรื่อง เมืองตากน่ายล ที่มีต่อผลสัมฤทธิ์ ทางการเรียนและเจตคติต่อท้องถิ่นของนักเรียนชั้นประถมศึกษาปีที่ 4 โรงเรียนบ้านทุ่งมะขามป้อม จังหวัดตาก
DOI: 10.17632/bw6vk3sb92.1
title: Complementary & Alternative Medicine for Alopecia Areata - Supplement 1

description: Supplement 1 - Quality of studies
DOI: 10.17632/ckwrw25rps.2
title: raw data

description: 1、Since there are many calculation examples in this article, the result files are large (about 2T), so only some of the codes required for calculation are submitted here 2、The relaxation process of He bubbles with the He/vacancy ratios of 1 and 1.5, respectively
DOI: 10.17632/ckwrw25rps.3
title: raw data

description: 1、Since there are many calculation examples in this article, the result files are large (about 2T), so only some of the codes required for calculation are submitted here 2、The relaxation process of He bubbles with the He/vacancy ratios of 1 and 1.5, respectively
DOI: 10.17632/n44rh6m5jp.1
title: Complementary & Alternative Medicine for Alopecia Areata - Supplement 2

description: Oxford scale for studies included
DOI: 10.14457/stou.the.2016.174
title: ผลการให้การปรึกษาแบบกลุ่ม ตามแนวคิดทฤษฎีพิจารณาเหตุผลอารมณ์ และพฤติกรรม ที่มีต่อเจตคติการป้องกันการมีเพศสัมพันธ์ก่อนวัยอันควร ของนักเรียนชั้นมัธยมศึกษาปีที่ 5 โรงเรียนมาบตาพุดพันพิทยาคาร จังหวัดระยอง
DOI: 10.14457/stou.the.2017.76
title: ผลการใช้ชุดกิจกรรมแนะแนวเพื่อสร้างเสริมความตระหนักรู้ในตนเอง ด้านอาชีพของนักเรียนระดับประกาศนียบัตรวิชาชีพชั้นปีที่ 3 สาขางานซ่อมบำรุงเครื่องจักรกลวิทยาลัยการอาชีพหนองแค จังหวัดสระบุรี
DOI: 10.14457/stou.the.2017.77
title: ความผิดปกติทางจิตในกฎหมายอาญา : ศึกษาเฉพาะคำศัพท์ นิยาม และการตีความทางกฎหมาย
DOI: 10.14457/stou.the.2017.78
title: วัฒนธรรมองค์การที่ส่งผลต่อประสิทธิภาพการบริหารจัดการ ในโรงเรียนไทยรัฐวิทยา ในเขตภาคกลางและภาคตะวันออก
DOI: 10.14457/stou.the.2017.79
title: ผลการจัดกิจกรรมการเรียนรู้โดยใช้ประเด็นวิทยาศาสตร์กับสังคมที่มีต่อผลสัมฤทธิ์ทางการเรียนวิทยาศาสตร์และความสามารถในการคิดวิเคราะห์ ของนักเรียนชั้นมัธยมศึกษาปีที่ 2 จังหวัดนนทบุรี
DOI: 10.14457/stou.the.2017.80
title: การดำเนินงานการประกันคุณภาพภายในโรงเรียนเอกชนนอกระบบ จังหวัดสมุทรสาคร
DOI: 10.14457/stou.the.2017.81
title: การปรับเปลี่ยนธุรกิจยุคดิจิทัลด้านบริหารงานคุณภาพและบริการไอที ของอุตสาหกรรมเซรามิกไทยด้วย ISO 9001 และ ISO 20000
DOI: 10.14457/stou.the.2017.82
title: การสื่อสารเพื่อสร้างความนิยมของผู้นำทางการเมืองท้องถิ่น