cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.2563828
title: Bedrock radioactivity influences the rate and spectrum of mutation - Orthologous genes

description: Alignments of the 2490 orthologous genes used in the article "Natural Bedrock radioactivity influences the rate and spectrum of mutation" to estimate the mutational spectrum and synonymous substitution rate. To compute accurate synonymous substitution rate, we removed genes with short sequences (&lt;half of the alignment) and genes strongly supporting another phylogeny using ProfileNJ (Noutahi et al. 2016) with a bootstrap threshold of 90%, resulting in a subset of 769 genes listed in the file "List_769_1-to-1_orthologs_EvolutionRate.txt". Transcriptome paired-end reads used to define these orthologous genes have been deposited to the European Nucleotide Archive and are available under the study ID PRJEB14193. Sequences were aligned with Prank (Löytynoja & Goldman 2008) using a codon model and sites ambiguously aligned were removed with Gblocks (Castresana 2000).
description: {"references": ["L\u00f6ytynoja, A. & Goldman, N., 2008. Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis. Science, 320(5883), pp.1632\u20131635.", "Castresana, J., 2000. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Molecular biology and evolution, 17(4), pp.540\u2013552.", "Noutahi, E. et al., 2016. Efficient Gene Tree Correction Guided by Genome Evolution. PloS one, 11(8), p.e0159559."]}
DOI: 10.5281/zenodo.3246568
title: Process Models obtained from event logs with with different information-preserving abstractions

description: This dataset contains results of the experiment to analyze information preservation and recovery by different event log abstractions in process mining described in: Sander J.J. Leemans, Dirk Fahland "Information-Preserving Abstractions of Event Data in Process Mining"<br>
Knowledge and Information Systems, ISSN: 0219-1377 (Print) 0219-3116 (Online), accepted May 2019

The experiment results were obtained with: https://doi.org/10.5281/zenodo.3243981
description: {"references": ["Sander J.J. Leemans, Dirk Fahland \"Information-Preserving Abstractions of Event Data in Process Mining\" Knowledge and Information Systems, ISSN: 0219-1377 (Print) 0219-3116 (Online), accepted May 2019"]}
DOI: 10.17632/xxm4p6vmt4.1
title: Data for: Successfully Learning Non-Adjacent Dependencies in a Continuous Artificial Language Stream

description: This zip file contains data from the 4 experiments reported in Wang, Zevin & Mintz (under review).
DOI: 10.17632/z9bfcxh67m.1
title: Data for: Methyl 2-naphthoates from a traditional Chinese herb Morinda officinalis var. officinalis

description: Supplementary material for TET-D-19-00506
DOI: 10.5281/zenodo.3246648
title: The optimization of a jet turbojet engine by PSO and searching algorithms

description: The turbojet engine operates on the ideal Brayton cycle (gas turbine) and consists of six main parts: diffusers, compressors, combustion chambers, turbines, afterburners and nozzles. Using computer code writing in MATLAB software environment, exergy analysis on all selected turbojet engine components, exergy analysis on J85-GE-21 turbojet engine for selective height of 10008000 meters above sea level at speeds of 200 m/s and temperatures of 10, 20 and 40 ° C have been provided and then, according to the system functions, the system is optimized based on the PSO method. For the purpose of optimization, variables of Mach number, efficiency of the compressor, turbine, nozzle and compressor pressure ratio are considered in the range of 0.6 to 1.4, 0.8 to 0.95, 0.8 to 0.95 and 7 to 10, respectively. The highest exergy efficiency of different parts of the engine at sea level with an inlet air velocity of 200 m/s corresponds to a diffuser with 73.1%. Then, the nozzle and combustion chamber are respectively 68.6% and 51.5%. The lowest exergy efficiency is related to compressor with 4%. After that, the afterburner is ranked second with 11.6%. Also, the values of entropy produced and the efficiency of the second law before optimization were 1176.99 and 479 w/k respectively and the same values after optimization were 1129 and 51.4 w/k respectively which is identified. After the optimization process, the amount of entropy produced is reduced and the efficiency of the second law of thermodynamics has increased.<br>
DOI: 10.5281/zenodo.3246649
title: The optimization of a jet turbojet engine by PSO and searching algorithms

description: The turbojet engine operates on the ideal Brayton cycle (gas turbine) and consists of six main parts: diffusers, compressors, combustion chambers, turbines, afterburners and nozzles. Using computer code writing in MATLAB software environment, exergy analysis on all selected turbojet engine components, exergy analysis on J85-GE-21 turbojet engine for selective height of 10008000 meters above sea level at speeds of 200 m/s and temperatures of 10, 20 and 40 ° C have been provided and then, according to the system functions, the system is optimized based on the PSO method. For the purpose of optimization, variables of Mach number, efficiency of the compressor, turbine, nozzle and compressor pressure ratio are considered in the range of 0.6 to 1.4, 0.8 to 0.95, 0.8 to 0.95 and 7 to 10, respectively. The highest exergy efficiency of different parts of the engine at sea level with an inlet air velocity of 200 m/s corresponds to a diffuser with 73.1%. Then, the nozzle and combustion chamber are respectively 68.6% and 51.5%. The lowest exergy efficiency is related to compressor with 4%. After that, the afterburner is ranked second with 11.6%. Also, the values of entropy produced and the efficiency of the second law before optimization were 1176.99 and 479 w/k respectively and the same values after optimization were 1129 and 51.4 w/k respectively which is identified. After the optimization process, the amount of entropy produced is reduced and the efficiency of the second law of thermodynamics has increased.<br>
DOI: 10.7910/dvn/bgnntj/cidmbs
title: Ssn93ki.dbf

description: :unav
DOI: 10.17632/3xt38whg44.1
title: Data for: Microarray and Protein Profiles of Hippocampal Neurons after Early-Life Exposure to Excitotoxins Reveal Distinct Regulation and Induction of Common Survival Signaling Pathways

description: Original excel files of all regulated genes in the Agilent rat micro-array chips.
DOI: 10.7910/dvn/bgnntj/7dlat4
title: Ssn93kr2.dbf

description: :unav
DOI: 10.7910/dvn/bgnntj/8yz4uj
title: Ssn93kr1.dbf

description: :unav
DOI: 10.7910/dvn/bgnntj/faqcyj
title: Kuesioner Susenas 1993 Kor.doc

description: :unav
DOI: 10.7910/dvn/bgnntj/jbenkl
title: Layout Susenas 1993 Kor.xls

description: :unav
DOI: 10.7910/dvn/tlf14e/4ff0ui
title: SSN95KI.dbf

description: :unav
DOI: 10.7910/dvn/tlf14e/c6vfui
title: Layout Susenas 1995 Kor.xls

description: :unav
DOI: 10.7910/dvn/tlf14e/fpg9wv
title: Kuesioner Susenas 1995 Kor.doc

description: :unav
DOI: 10.7910/dvn/tlf14e/mqalax
title: SSN95KR.dbf

description: :unav
DOI: 10.7910/dvn/u1ovmv/mp2fqy
title: SSN94IND.DBF

description: :unav
DOI: 10.7910/dvn/u1ovmv/pk7wm3
title: SSN94RUM.DBF

description: :unav
DOI: 10.7910/dvn/u1ovmv/rb5rgn
title: Questionaire SSN94 KOR.doc

description: :unav
DOI: 10.7910/dvn/u1ovmv/t2qblf
title: LayOut Susenas 1994 - Kor.xls

description: :unav
DOI: 10.7910/dvn/29ktej/fd1udw
title: SSN96KI.DBF

description: :unav
DOI: 10.7910/dvn/29ktej/oghgei
title: SSN96KR.DBF

description: :unav
DOI: 10.7910/dvn/29ktej/p68zr7
title: Kuesioner Susenas 1996 Kor.doc

description: :unav
DOI: 10.7910/dvn/29ktej/sf47ea
title: LayOut Susenas 1996 Kor.xls

description: :unav
DOI: 10.7910/dvn/bfbon0/ox7xu1
title: kor97ind.dbf

description: :unav
DOI: 10.7910/dvn/bfbon0/trcfvy
title: Kuesioner Susenas 1997 Kor.doc

description: :unav
DOI: 10.7910/dvn/bfbon0/undlnv
title: kor97rum.dbf

description: :unav
DOI: 10.7910/dvn/ljlz09/2hgsxx
title: Kuesioner Susenas 1998 Kor.doc

description: :unav
DOI: 10.7910/dvn/ljlz09/opdtdw
title: kor98ind.dbf

description: :unav
DOI: 10.7910/dvn/ljlz09/tdgmwk
title: kor98r1u.dbf

description: :unav
DOI: 10.7910/dvn/ljlz09/txiodp
title: kor98r2.dbf

description: :unav
DOI: 10.7910/dvn/ljlz09/wrgccd
title: Layout SSN98 Kor.xls

description: :unav
DOI: 10.5063/f1qf8r5t
title: Oak seedling and sapling survival and growth in a California savanna under four herbivore treatments

description: Survival and height growth records for individual plants of Quercus agrifolia (n=4281) and Q. lobata (n=4268) from a long term experiment in mixed oak savanna at Sedgwick Reserve, Santa Barbara County, California. Plants were sown as acorns under 4 consumer treatments: no protection; protection from cattle; protection from cattle and deer; and, protection from cattle, deer and rodents. Acorns were sown in 1997, 1998, 2000 and 2001, and were monitored at least annually until 2009. Acorns and seedlings did not receive supplemental water.
DOI: 10.17632/bzfd563j3c.1
title: Data for: Minimizing Undesirable Load Shedding through Robust Coordination of Directional Overcurrent Relays
DOI: 10.5063/f1v40sj8
title: Code and data for biodiversity, spatial community structure, and spatial community composition of groundfish in the Gulf of Alaska

description: This data package includes a provenance diagram, code, and derived data used in the analysis for the publication titled "Spatial community structure of groundfish is conserved across the Gulf of Alaska". In this paper we did the following: The mechanisms structuring patterns of diversity and community composition can be difficult to identify in large, open ecological systems. However, it is important to understand what drives these patterns at larger scales, especially in the face of climate change and other perturbations. The Gulf of Alaska (GOA) is an ideal study system, because it has complex topography, climate-driven variability, and an on-going groundfish community survey. We used groundfish community data to examine the ecological theory underlying spatial diversity and community composition across 10 study areas in the GOA. We created geostatistically modeled groundfish abundance and biomass from the Alaska Fisheries Science Center trawl survey data (1984 – 2015) to address inherent errors in trawl observations. We found that species richness, and alpha, beta, and functional diversity varied little both within and between study areas. However, turnover in community composition was significant along a longitudinal gradient, with differences driven by lower-abundance species. Fishing pressure had non-linear effects only on species richness and local diversity, while productivity was linearly related to beta diversity. We conclude that spatial patterns of diversity were not driven by disturbance, but were largely driven by environmental heterogeneity, because of the longitudinal turnover in community composition and high beta diversity (low saturation). In addition, the invariant functional diversity but varying community composition together indicate functional redundancy in this ecosystem. Finally, the spatially invariant alpha and functional diversity show that the underlying community structure of the GOA groundfish community was conserved across this large marine ecosystem.
DOI: 10.5281/zenodo.3246910
title: Job satisfaction and performance orientation in German emergency medical service – a nationwide survey

description: In a nationwide German cross-sectional questionnaire survey, we collected data on job satisfaction an perfomance orientation of paramedics in Germany. This file contains the underlying data set as a result of the online questionnaire.
DOI: 10.5281/zenodo.3246911
title: Job satisfaction and performance orientation in German emergency medical service – a nationwide survey

description: In a nationwide German cross-sectional questionnaire survey, we collected data on job satisfaction an perfomance orientation of paramedics in Germany. This file contains the underlying data set as a result of the online questionnaire.
DOI: 10.17632/ypsyszckvy.1
title: Data for: Upper Triassic sedimentology and stratigraphic correlation constrain the orientation and distribution of northern Indian passive continental margin basin

description: Appendix A: The Upper Triassic – Lower Jurassic lithostratigraphy of the Tethys Himalaya and our explanation of the choice of lithostratigraphic codes and boundaries; Appendix B: References of the cited U-Pb (zircon) geochronologic analyses; Table 1. Paleocurrent data from the section 14TLD of the Quartzite Series; Table 2. Heavy minerals composition of the Quartzite Series; Table 3. Stratigraphic correlation of the Quartzite Series throughout the THS; Table A1. Summary of the Upper Triassic to Lower Jurassic lithostratigraphic nomenclature for the Tethys Himalaya; Table A2. Modal petrology point-counting results of the Quartzite Series; Table A3. U-Pb zircon geochronologic analyses of the Quartzite Series, referenced data and their sources.
DOI: 10.25919/5d0407357d495
title: Parkes observations for project P737 semester 2019APRS_07

description: The aim of this proposal is to carry out tests of the new backend instruments which cannot be carried out during standard maintenance periods.  The scheduled time is used to measure beam shapes, determine polarisation calibration solutions and commission the National Facility observing modes for the new wide-band receiver.
DOI: 10.25919/5d04076311b33
title: Parkes observations for project P456 semester 2019APRS_36

description: The Parkes Pulsar Timing Array (PPTA) project has three primary goals: (a) detection of gravitational waves from astronomical sources, (b) establishment of a pulsar timescale, and (c) improvement of our understanding of Solar-system dynamics. The PPTA is the oldest of three international pulsar timing groups. We have the smallest telescope and the smallest group, but the best measurements and the best results. Our bound on the strength of the incoherent gravitational wave background is the only bound which significantly constrains theoretical models. We have maintained our leading position because: we have the southern sky; we have a small but well-focussed group; we have the best-calibrated receivers; and we have been able to observe with an almost regular cadence of 15 to 20 days over a wide bandwidth. With this proposal we aim to maintain our pre-eminent position in the field.

Unlike most observing proposals, this is a continuing proposal for which the observations will continue to improve bounds on ultra-low-frequency gravitational waves until they are finally detected. Continued Parkes observations will remain valuable at least until the first stage of the SKA is able to improve on our sensitivity and observing cadence. Even after the gravitational wave background is detected we will want to continue observations in support of the nascent field of gravitational wave astronomy!
DOI: 10.7910/dvn/fy7svg/ari2hs
title: cces18.tab

description: :unav
DOI: 10.7910/dvn/fy7svg/czjkb9
title: cces14.tab

description: :unav
DOI: 10.14469/hpc/5848
title: Bromoallene, Def2-SVPD 2AgOAc complex C-O formation, acetic acid solvent (R) G=-3633.232696

description: Gaussian Calculation
DOI: 10.14469/hpc/5849
title: Bromoallene, Def2-SVPD 2AgOAc complex C-Br cleavage, TS acetic acid solvent (R ) G=-3633.223311

description: Gaussian Calculation
DOI: 10.17632/s5r9cgbg32.1
title: Data for: Exposure of hydrocarbon intumescent coatings to the UL1709 heating curve and furnace rheology: Effects of zinc borate on char properties

description: Raw and processed data for this manuscript
DOI: 10.17632/ymbzmdchyk.1
title: Data for: Positive outcomes between crop diversity and agricultural employment worldwide

description: Data analysed in the manuscript.
DOI: 10.7910/dvn/fy7svg/n1xcez
title: ssi18.tab

description: :unav
DOI: 10.7910/dvn/fy7svg/zwahm4
title: Party_Animals_Replication.R

description: Replicates figures and tables using the three provided .csv files.
DOI: 10.25345/c5k05p
title: MassIVE MSV000083979 - 20190615_data_Copenhagen_network_try1
title: investigating cyanogenic glucosides in Heliconiini
DOI: 10.17632/jh68yz4f2y.1
title: Data for: The Impact of Multi-Component Hypersaline Wetting on Retention - as well as Soluble and Bound Cations in Unsaturated Compacted MX80 Bentonite and MX80-Sand Mixtures

description: Data upon which paper is based
DOI: 10.25919/5d040bea8de5d
title: Parkes pulsar observations with undefined project IDs for 2019_21

description: Parkes pulsar observations with undefined project IDs for 2019. This collection contains observations from project PX050.
DOI: 10.17632/k7fvyb3tjn.1
title: Data for: Toxic effects of 1-(N-methyl-N-nitrosamino)-1-(3-pyridinyl)-4-butanal on the maturation and subsequent development of murine oocyte

description: NNA exposure reduced the polar body extrusion rate by leading 8-oxo-deoxyguanosine (8-OHdG) increasing, and disrupting the meiotic spindle morphology by inhibiting ERK1/2 activation during in vitro maturation. Additionally, NNA exposure resulted in cleavage and blastocyst rates reduction by altering DNA and histone methylations with reducing 5mC and H3K4me2 levels, and by inducing apoptosis caused by mitochondrial dysfunction and ROS accumulation, as shown by increased SOD mRNA level and decreased Bcl-x mRNA level. Taken together, our results demonstrate that NNA exposure reduces the maturation and developmental capability of murine oocytes by increasing the risk of DNA damage and abnormal spindle morphology, altering epigenetic modifications and inducing apoptosis, suggesting toxic effect of NNA on mammalian productive health.
DOI: 10.5281/zenodo.3246769
title: List of (tentatively) identified non-target structures

description: This is a list of candidate structures of organic contaminants (tentatively) identified in a riverbank filtration system in The Netherlands by non-target screening of high-resolution mass spectrometry data  (associated with ACS Publication 10.1021/acs.est.9b01750).
description: The drinking water company Oasen (Gouda, The Netherlands) is acknowledged for funding the ECROS project at the Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam. Funding at Eawag was provided through the EU seventh Framework Programme SOLUTIONS project under Grant Agreement No. 603437. Work at LCSB was supported by the Luxembourg National Research Fund (FNR), grant number 12341006.
DOI: 10.5281/zenodo.3246770
title: List of (tentatively) identified non-target structures

description: This is a list of candidate structures of organic contaminants (tentatively) identified in a riverbank filtration system in The Netherlands by non-target screening of high-resolution mass spectrometry data  (associated with ACS Publication 10.1021/acs.est.9b01750).
description: The drinking water company Oasen (Gouda, The Netherlands) is acknowledged for funding the ECROS project at the Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam. Funding at Eawag was provided through the EU seventh Framework Programme SOLUTIONS project under Grant Agreement No. 603437. Work at LCSB was supported by the Luxembourg National Research Fund (FNR), grant number 12341006.
DOI: 10.5281/zenodo.3246952
title: DWD European Weather 2

description: opendata.dwd.de - OpenData by Deutscher Wetter Dienst

Conditions: https://www.dwd.de/EN/service/copyright/copyright_node.html

dates and times are UTC.
DOI: 10.25919/5d058f5096456
title: Parkes observations for project P958 semester 2019APRS_33

description: Fast radio bursts (FRBs) continue to raise more questions than they answer. Until a few months ago, only one burst – the only one known to repeat -  had been localized to a bright radio nebula (either a young supernova remnant or pulsar wind nebulae) in a distant dwarf galaxy.   
Over the last year searches with the Australian Square Kilometre Array Pathfinder (ASKAP) have detected 28 bursts, two of which have been localised to host galaxies at redshifts &gt; 0.3. These bursts and their hosts are very unlike the repeater, suggesting there may be a dichotomy in the population.  Over the next six months we expect to detect another 12 FRBs, which will also have sub-arcsecond localisations.   Here we propose to search this population for repeats.  Our comprehensive sample and a dense monitoring campaign of well localised bursts, at a fluence limit more than 60 times lower than that of their detections, will either confirm the presence of additional repeating FRBs or the uniqueness of FRB 121102 amongst the population.
DOI: 10.7910/dvn/wusiql
title: Facebook URL Shares-Light Training Data

description: This codebook results from a collaboration between Facebook and Social Science One, originally prepared for Social Science One grantees. It describes the first URLs training dataset, including its scope, structure, and fields. This data is drawn from a subset of the URLs-Light dataset, also described on this Dataverse. This dataset replaces numeric values with simulated values.
DOI: 10.7910/dvn/wusiql/pd1kfw
title: Facebook URLs-Training Data Codebook.pdf

description: :unav
DOI: 10.7910/dvn/dszhip/gfkhmy
title: 10. Jensen_Rosas_Canada_2015DoFile.do

description: :unav
DOI: 10.5281/zenodo.3243186
title: Dealing with discontinuous meteorological forcing in operational ocean modelling: a case study using ECMWF-IFS and GETM (v2.5)

description: Data used in manuscript "Dealing with discontinuous meteorological forcing in operational ocean modelling: a case study using ECMWF-IFS and GETM (v2.5)" for Geoscientific Model Development. Uploaded data includes GETM output and used source code (FABM+GOTM+GETM).
description: Note that FABM, GOTM and GETM are covered by their own licenses, see https://getm.eu/, https://gotm.net/, and https://github.com/fabm-model/fabm/wiki
DOI: 10.5281/zenodo.3243187
title: Dealing with discontinuous meteorological forcing in operational ocean modelling: a case study using ECMWF-IFS and GETM (v2.5)

description: Data used in manuscript "Dealing with discontinuous meteorological forcing in operational ocean modelling: a case study using ECMWF-IFS and GETM (v2.5)" for Geoscientific Model Development. Uploaded data includes GETM output and used source code (FABM+GOTM+GETM).
description: Note that FABM, GOTM and GETM are covered by their own licenses, see https://getm.eu/, https://gotm.net/, and https://github.com/fabm-model/fabm/wiki
DOI: 10.7910/dvn/4tjzdw/o2x4rw
title: Article for Review of International Economics (dispute settlement).do

description: :unav
DOI: 10.7910/dvn/4tjzdw/uphffg
title: Article for Review of International Economics (dispute settlement).tab

description: :unav
DOI: 10.7910/dvn/dszhip/2jlank
title: 3. Jensen_Rosas_US_TAPS_2015.tab

description: :unav
DOI: 10.7910/dvn/dszhip/6havob
title: 2. Jensen_Rosas_US_TAPS_2014.tab

description: :unav
DOI: 10.7910/dvn/dszhip/b8bbap
title: 1. JEPS Jensen_Rosas README.txt

description: :unav
DOI: 10.7910/dvn/dszhip/d45vjk
title: 11. Jensen_Rosas_US_TAPS_2014_Log.smcl

description: :unav
DOI: 10.7910/dvn/dszhip/fmj1iq
title: 4. Jensen_Rosas_Canada_2015.tab

description: :unav
DOI: 10.7910/dvn/dszhip/jbkhhu
title: 12. Jensen_Rosas_US_TAPS_2015_Log.smcl

description: :unav
DOI: 10.7910/dvn/dszhip/jikqyz
title: 7. Jensen_Rosas_plots_balanceStatistics_log.txt

description: :unav
DOI: 10.7910/dvn/dszhip/ualomt
title: 5. Jensen_Rosas_plots_balanceStatistics.R

description: :unav
DOI: 10.7910/dvn/dszhip/znfpsz
title: 8.Jensen_Rosas_US_TAPS_2014DoFile.do

description: :unav
DOI: 10.7910/dvn/dszhip/6ltvdr
title: 6. Jensen_Rosas_plots_balanceStatistics_log2.pdf

description: :unav
DOI: 10.7910/dvn/dszhip/dbrjf7
title: 13. Jensen_Rosas_Canada_2015_Log.smcl

description: :unav
DOI: 10.7910/dvn/dszhip/p7igl0
title: 9.Jensen_Rosas_US_TAPS_2015DoFile.do

description: :unav