cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.j6bnqh
title: Occurrence Download

description: A dataset containing 11481 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hieracium villosum Jacq.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11481 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080853-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.63w8f5
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hieracium durum Hyl.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080854-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yncqvw
title: Occurrence Download

description: A dataset containing 878 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Glycyrrhiza uralensis Fisch. ex DC."
 ]
}

 The dataset includes 878 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080855-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t5hkhv
title: Occurrence Download

description: A dataset containing 379 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anaphalis triplinervis (Sims) C.B.Clarke)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 379 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080857-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ds3dg7
title: Occurrence Download

description: A dataset containing 5318 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dolichus halensis (Schaller, 1783)"
 ]
}

 The dataset includes 5318 records from 138 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080856-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25932391.v4
title: Supplementary Material for: Differential Effect of JAK1/2 and TYK2 Inhibitors on Type III Interferon Induced Antiviral Defence in Human Intestinal Epithelial Cells

description: <b><i>Introduction:</i></b> Many cytokines, acting via Janus kinase (JAK)/tyrosine kinase 2 (TYK2)/signal transducer and activator of transcription (STAT) signalling pathways, are critical mediators of pathology in immune-mediated inflammatory diseases (IMIDs). Therefore, drugs that inhibit JAKs and TYKs (JAKis) have gained traction as effective treatment options for IMIDs. However, a common side effect of JAKis is increased risk of viral infection. Type I and III interferon (IFN) signal via JAK1 and TYK2. Type III IFNs protect mucosal membranes, including the intestinal barrier, from viral infection and type I IFNs prevent systemic viral spread. <b><i>Methods:</i></b> The human cell lines Caco-2 and HT-29 were used to investigate the impact of currently approved JAKis, baricitinib (JAK1/2 inhibitor) and deucravacitinib (TYK2 inhibitor), on type I and III IFN signalling and antiviral defence of intestinal epithelial cells (IECs). <b><i>Results:</i></b> Using concentrations commonly used for in vitro studies on IFNs, we found that attenuation of IFN-mediated antiviral defence in IECs is a mechanism that could contribute to the increased risk of viral infections associated with JAKis. However, when we examined clinically relevant drug concentrations, we found that while both drugs blocked the type I IFN response, type III IFN-induced antiviral immunity was less affected during TYK2 inhibition (deucravacitinib) compared to JAK1/2 inhibition (baricitinib). <b><i>Conclusions:</i></b> Our studies suggest that in treating diseases associated with excessive cytokine production (e.g., type I IFNs, interleukin (IL)-6, and IL-23), a TYK2 inhibitor may be preferable over a JAK1/2 inhibitor. This preference arises as the TYK2 inhibitor can effectively block the activity of proinflammatory and tissue-damaging cytokines (e.g., type I IFNs), while having less negative impact on the intestine’s ability to respond to type III IFN, thereby enabling it to enter an antiviral state.
DOI: 10.15468/dl.husnec
title: Occurrence Download

description: A dataset containing 14105 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chloris spinoides (Vigors, 1831)"
 ]
}

 The dataset includes 14105 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080858-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qbhdey
title: Occurrence Download

description: A dataset containing 2494 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Vellereophyton dealbatum (Thunb.) Hilliard & Burtt)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2494 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080859-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.awaqk2
title: Occurrence Download

description: A dataset containing 426 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Drypta japonica Bates, 1873"
 ]
}

 The dataset includes 426 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080860-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9cfgme
title: Occurrence Download

description: A dataset containing 3631 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Leontodon hirtus L.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3631 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080861-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5xt4dg
title: Occurrence Download

description: A dataset containing 319 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ectinus sericeus"
 ]
}

 The dataset includes 319 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080862-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17882/100650
title: The wave coherent stress and turbulent structure over swell waves

description: The generation of ocean surface waves by wind has been studied for a century, giving rise to wave forecasting and other crucial applications. However, the reacting force of swell waves on the turbulence in the marine Atmospheric Boundary Layer (ABL) remains unknown partly due to the unclear magnitude and profile of Wave Coherent (WC) stress. Here, we present three levels of observed data from a fixed platform located in the South China Sea. The data includes the intersection frequency between the energy-containing range and inertial subrange range in the turbulent spectra, wave coherent stress, total wind stress and wind speed.
DOI: 10.6084/m9.figshare.25932391.v7
title: Supplementary Material for: Differential Effect of JAK1/2 and TYK2 Inhibitors on Type III Interferon Induced Antiviral Defence in Human Intestinal Epithelial Cells

description: <b><i>Introduction:</i></b> Many cytokines, acting via Janus kinase (JAK)/tyrosine kinase 2 (TYK2)/signal transducer and activator of transcription (STAT) signalling pathways, are critical mediators of pathology in immune-mediated inflammatory diseases (IMIDs). Therefore, drugs that inhibit JAKs and TYKs (JAKis) have gained traction as effective treatment options for IMIDs. However, a common side effect of JAKis is increased risk of viral infection. Type I and III interferon (IFN) signal via JAK1 and TYK2. Type III IFNs protect mucosal membranes, including the intestinal barrier, from viral infection and type I IFNs prevent systemic viral spread. <b><i>Methods:</i></b> The human cell lines Caco-2 and HT-29 were used to investigate the impact of currently approved JAKis, baricitinib (JAK1/2 inhibitor) and deucravacitinib (TYK2 inhibitor), on type I and III IFN signalling and antiviral defence of intestinal epithelial cells (IECs). <b><i>Results:</i></b> Using concentrations commonly used for in vitro studies on IFNs, we found that attenuation of IFN-mediated antiviral defence in IECs is a mechanism that could contribute to the increased risk of viral infections associated with JAKis. However, when we examined clinically relevant drug concentrations, we found that while both drugs blocked the type I IFN response, type III IFN-induced antiviral immunity was less affected during TYK2 inhibition (deucravacitinib) compared to JAK1/2 inhibition (baricitinib). <b><i>Conclusions:</i></b> Our studies suggest that in treating diseases associated with excessive cytokine production (e.g., type I IFNs, interleukin (IL)-6, and IL-23), a TYK2 inhibitor may be preferable over a JAK1/2 inhibitor. This preference arises as the TYK2 inhibitor can effectively block the activity of proinflammatory and tissue-damaging cytokines (e.g., type I IFNs), while having less negative impact on the intestine’s ability to respond to type III IFN, thereby enabling it to enter an antiviral state.
DOI: 10.15468/dl.cyrrrc
title: Occurrence Download

description: A dataset containing 334 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Egesina bifasciana (Matsushita, 1933)"
 ]
}

 The dataset includes 334 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080864-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sacjyp
title: Occurrence Download

description: A dataset containing 1193 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Carex oedipostyla Duval-Jouve)",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 }
 ]
}

 The dataset includes 1193 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080866-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fr5x2k
title: Occurrence Download

description: A dataset containing 79 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Japan",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Vincetoxicum atratum (Bunge) C.Morren & Decne."
 ]
}

 The dataset includes 79 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080865-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5j54vf
title: Occurrence Download

description: A dataset containing 128 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elaphrus sibiricus Motschulsky, 1844"
 ]
}

 The dataset includes 128 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080867-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48597/tqvj-g5a8
title: Measurement of Nitrogen oxides at Hohenpeissenberg

description: Measurement of Nitrogen oxides at Hohenpeissenberg
DOI: 10.15468/dl.dn6jkw
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Continent is Africa",
 "RecordedBy is FORBES",
 "TaxonKey is Tracheophyta",
 "Year 1000-1855"
 ]
}

 The dataset includes 32 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080869-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11945656
title: carex_pendula_zanfona_1.fasta.gz

description: .
DOI: 10.5281/zenodo.11945658
title: carex_pendula_zanfona_1.fasta.gz

description: .
DOI: 10.15468/dl.tk338f
title: Occurrence Download

description: A dataset containing 684 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epiglenea comes Bates, 1884"
 ]
}

 The dataset includes 684 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080871-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6fp3n8
title: Occurrence Download

description: A dataset containing 2591 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is one of (Carex peregrina Link)",
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 }
 ]
}

 The dataset includes 2591 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080872-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11943721
title: Preprocessed dataset required to reproduce Supplementary Figure S5FG

description: Description



These files are required to reproduce the supplementary figure S5FG of the paper.

The DataOverview_SF5FG provides AnimalIDs and recording dates.

For each AnimalID in the DataOverview this dataset contains:

1) The pre-processed photometry data of the CoT session (filename: mouseID_date_smoothed_signal.npy) 

2) A dataframe containing all relevant behavioural events and time stamps of the CoT session (filename: mouseID_date_restructured_data.pkl)

The CoT session was recorded after the threat experiment.
DOI: 10.5281/zenodo.11943722
title: Preprocessed dataset required to reproduce Supplementary Figure S5FG

description: Description



These files are required to reproduce the supplementary figure S5FG of the paper.

The DataOverview_SF5FG provides AnimalIDs and recording dates.

For each AnimalID in the DataOverview this dataset contains:

1) The pre-processed photometry data of the CoT session (filename: mouseID_date_smoothed_signal.npy) 

2) A dataframe containing all relevant behavioural events and time stamps of the CoT session (filename: mouseID_date_restructured_data.pkl)

The CoT session was recorded after the threat experiment.
DOI: 10.6084/m9.figshare.25911163.v1
title: Supplementary Material for: Donor inhalation of nebulized dexmedetomidine alleviates ischemia reperfusion damage in rat lung transplantation

description: Introduction: The occurrence of lung ischemia-reperfusion injury (LIRI) after lung transplantation results in primary graft dysfunction (PGD) in more than 50% of cases, which seriously affects the prognosis of recipients. Currently, donor lung protection is the focus of research on improving graft survival in lung transplant recipients. Dexmedetomidine (Dex) is a widely used general anesthesia adjuvant in clinical practice to alleviate ischemia-reperfusion injury in the lungs, liver, heart, kidneys, and brain. However, intravenous infusion of Dex can cause negative effects on the cardiovascular system. Inhaling nebulized Dex can directly act on the alveolar tissue and alleviate its cardiovascular inhibitory effect by reducing drug intake. This study aimed to investigate the effect of donor nebulized Dex inhalation on LIRI after lung transplantation in rats. 
Methods:We randomly allocated male Sprague–Dawley rats into donor groups inhaling nebulized Dex or saline 15 min preoperatively. The donor lung was refrigerated for 8 h before each single lung transplant. After 2 h of reperfusion of the transplanted lung, serum and transplanted lung tissue were collected. The wet-to-dry weight ratio of the lung tissue was measured, arterial blood gas was detected, and histopathology changes, oxidative stress, inflammatory reactions, and apoptosis were evaluated. 
Results: Pre-transplant inhalation of Dex through the donor’s lung reduced the injury of the transplanted lung, increased the levels of malondialdehyde and myeloperoxidase, and decreased the levels of superoxide dismutase and glutathione in the lung tissue. Moreover, nebulized Dex inhalation of the donor lung inhibited LIRI-induced tumor necrosis factor-α, interleukin-6, and inducible nitric oxide synthase expression, and also suppressed nuclear factor-kappa B phosphorylation. Nebulized Dex inhalation reduced the rate of cell apoptosis in the transplanted lung tissue by inhibiting the upregulation of Bax, downregulation of Bcl-2, and increase in caspase-3 lysis caused by LIRI. 
Conclusion: Inhalation of atomized Dex is a potential donor lung protection strategy, which can be used to reduce LIRI after lung transplantation and may be helpful to improve the occurrence of PGD and prognosis of lung transplant recipients.
DOI: 10.48597/hknj-k82f
title: Measurement of Sulphate_corrected at Víznar

description: Measurement of Sulphate_corrected at Víznar
DOI: 10.48597/w4r2-r8df
title: Measurement of Sulphate_corrected at Niembro

description: Measurement of Sulphate_corrected at Niembro
DOI: 10.15468/dl.wvx6na
title: Occurrence Download

description: A dataset containing 127 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eumecocera impustulata (Motschulsky, 1860)"
 ]
}

 The dataset includes 127 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080873-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/5bk-wt8-n92
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/bkw-rc3-xwm
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v15-t67-49j
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5eq-g6q-n11
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ydq-7k1-m4e
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j07-x1c-bfy
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jh4-vba-d8g
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/e8x-c00-cjj
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/n4y-g57-mcy
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l9w-4gh-myj
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rbe-ygd-xj3
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l64-mek-40d
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/w5h-sbv-e5y
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tdb-scw-qjt
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/y4t-gad-ja6
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j0p-l8a-an1
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/az0-9nr-h9j
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/d58-tks-qn8
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pbg-cea-pmx
title: Lepidoptera Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.6a9o5u
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002987-180925134338326/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u99np0
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 8 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0082822-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ukywsf
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Table 1) Proportion of Toxoplasma gondii seropositive arctic foxes (Alopex lagopus) by age group and geographic area"
 ]
}

 The dataset includes 32 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000682-180925134338326/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.