cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0174057.10fu
title: SH0174057.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.14918520
title: Data and Figure generating code for Figures 3 and 4 of the paper - "Breath-by-breath lung gas volume detection using GASMAS in a neonatal mannequin"

description: Version 2 Notes: This version updates the filenames of the uploaded files for improved clarity. The contents of the files are otherwise identical to those in Version 1.

Figure 3. Water Vapor (H2O) and Figure 4. Oxygen (O2) projected concentration (PC) values across different respiratory phases, tidal volumes and inspired fraction oxygen.

a and d - PC (mean, SD) for a range of different tidal volumes (2-6 ml) (see legend) over time (breath phases) and FiO2 (0.21 – first row, 1.00 – second row). Each data point represents the average value of the four breath cycles.

b and e – Estimated marginal means for H2O PC for inspiration vs expiration and FiO2 (0.21 – first row, 1.00 – second row).

The respiratory rate was set to deliver 20 breaths per minute with the duration of inspiration phase of 2 seconds (shaded in green) and expiration – 1 second (shaded in red).

c and f – The difference (Δ) of H2O PC between the two breath phases (inspiration and expiration) at the two FiO2 values (legend) as a function of the tidal volume.

Abbreviations: PC – projected concentration; FiO2 – Fraction of inspired oxygen; H2O – water vapor; O2 – oxygen gas.
DOI: 10.5281/zenodo.14918521
title: Data and Figure generating code for Figures 3 and 4 of the paper - "Breath-by-breath lung gas volume detection using GASMAS in a neonatal mannequin"

description: See Version v2 for files with updated filenames 

Figure 3. Water Vapor (H2O) and Figure 4. Oxygen (O2) projected concentration (PC) values across different respiratory phases, tidal volumes and inspired fraction oxygen.

a and d - PC (mean, SD) for a range of different tidal volumes (2-6 ml) (see legend) over time (breath phases) and FiO2 (0.21 – first row, 1.00 – second row). Each data point represents the average value of the four breath cycles.

b and e – Estimated marginal means for H2O PC for inspiration vs expiration and FiO2 (0.21 – first row, 1.00 – second row).

The respiratory rate was set to deliver 20 breaths per minute with the duration of inspiration phase of 2 seconds (shaded in green) and expiration – 1 second (shaded in red).

c and f – The difference (Δ) of H2O PC between the two breath phases (inspiration and expiration) at the two FiO2 values (legend) as a function of the tidal volume.

Abbreviations: PC – projected concentration; FiO2 – Fraction of inspired oxygen; H2O – water vapor; O2 – oxygen gas.
DOI: 10.15156/bio/sh0174058.10fu
title: SH0174058.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0174059.10fu
title: SH0174059.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0174060.10fu
title: SH0174060.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0174061.10fu
title: SH0174061.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0174062.10fu
title: SH0174062.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0174063.10fu
title: SH0174063.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.qr5qke
title: Occurrence Download

description: A dataset containing 30587 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ethiopia",
 "DatasetKey is BirdMap Data - GPS tracking of Storks, Cranes and birds of prey, breeding in Northern and Eastern Europe"
 ]
}

 The dataset includes 30587 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006002-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5fyvh8
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rodriguezia strobelii Garay"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0362182-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.az7unt
title: Occurrence Download

description: A dataset containing 24330904 species occurrences available in GBIF matching the query:
{
 "or" : [
 "Country is India",
 "Country is China",
 "Country is Myanmar",
 "Country is Bhutan"
 ]
}

 The dataset includes 24330904 records from 3712 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077606-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ko0bbf
title: Occurrence Download

description: A dataset listing the 97 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is France",
 "MediaType is Image",
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Mammalia"
 ]
}

 The dataset's 97 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008590-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10203718
title: Phylum Placozoa CANTATA Transcriptomes

description: CANTATA is a Community bAsed Non-bilaTeriAn Transcriptome Archive aiming to provide an archive of non-bilaterian transcriptomic resources assembled and annotated in a standardized manner.

 

In this repository, we provide the transcriptomes assemblies corresponding to the Phylum Placozoa.

 

Currently the following species are available:



Trichoplax adherens

Hoilungia hongkongensis


 

The details about the read files used to assemble each transcriptome can be found at the CANTATA repository (https://gitlab.lrz.de/palmuc/cantata)
DOI: 10.15468/dl.qd2jyt
title: Occurrence Download

description: A dataset containing 39135 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-2.08045 41.25694,26.02861 41.25694,26.02861 52.50694,-2.08045 52.50694,-2.08045 41.25694))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lynx lynx (Linnaeus, 1758)",
 "Year 1970-2024"
 ]
}

 The dataset includes 39135 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067110-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ggdg7
title: Occurrence Download

description: A dataset containing 232 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-93.71282 -6.81684,-36.96915 -6.81684,-36.96915 15.89236,-93.71282 15.89236,-93.71282 -6.81684))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bauhinia purpurea L."
 ]
}

 The dataset includes 232 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0390382-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9im7a3
title: Occurrence Download

description: A dataset containing 498 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is (Appendix F) Benthic foraminifera extinction group species in ODP Hole 162-982"
 ]
}

 The dataset includes 498 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009895-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mp8kwu
title: Occurrence Download

description: A dataset containing 498 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anthospermum spathulatum Spreng."
 ]
}

 The dataset includes 498 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007721-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nsakey
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Passalus emberaorum Jiménez-Ferbans, Reyes-Castillo, Schuster & Beza-Beza, 2018"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000675-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bgw34k
title: Occurrence Download

description: A dataset containing 9816464 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Ecuador"
 ]
}

 The dataset includes 9816464 records from 2028 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0157335-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15734435
title: Data of Mengcheng meteor velocity

description: Wu 2024 JGR: Meteor velocity data observed at the Mengcheng meteor radar station.

The data is here.

The code for the figures are available at https://github.com/ktwu01/Meteor-Speed-Variations.

The code in this repository is established on and should be run together with nhindley/acp-2021-981: Analysis and Figure code for ACP publication acp-2021-981 Hindley et al., (2022) https://zenodo.org/records/6819061.

 

Please read the "README" before using the code and data.

 





Citation:


Wu, K., Yi, W., Xue, X., Reid, I., & Lu, M. (2024). Diurnal and Seasonal Variations of Meteor Speed and Arrival Angle Observed by Mengcheng Meteor Radar. Journal of Geophysical Research: Space Physics, 129, e2024JA032767. https://doi.org/10.1029/2024JA032767
DOI: 10.5281/zenodo.8002779
title: Data of Mengcheng meteor velocity

description: Wu 2024 JGR: Meteor velocity data observed at the Mengcheng meteor radar station.

The data is here.

The code for the figures are available at https://github.com/ktwu01/Meteor-Speed-Variations.

The code in this repository is established on and should be run together with nhindley/acp-2021-981: Analysis and Figure code for ACP publication acp-2021-981 Hindley et al., (2022) https://zenodo.org/records/6819061.

 

Please read the "README" before using the code and data.

 





Citation:


Wu, K., Yi, W., Xue, X., Reid, I., & Lu, M. (2024). Diurnal and Seasonal Variations of Meteor Speed and Arrival Angle Observed by Mengcheng Meteor Radar. Journal of Geophysical Research: Space Physics, 129, e2024JA032767. https://doi.org/10.1029/2024JA032767
DOI: 10.15468/dl.wnh2ts
title: Occurrence Download

description: A dataset containing 9726478 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Peru"
 ]
}

 The dataset includes 9726478 records from 2374 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068225-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bep5dd
title: Occurrence Download

description: A dataset containing 4994089 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-118.6068 33.69737,-118.02836 33.69737,-118.02836 34.14924,-118.6068 34.14924,-118.6068 33.69737))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year 2010-2022"
 ]
}

 The dataset includes 4994089 records from 150 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052329-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v5v5a3
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ecpoma apocynaceum K.Schum."
 ]
}

 The dataset includes 16 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052341-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.udmegs
title: Occurrence Download

description: A dataset containing 92410568 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is iNaturalist Research-grade Observations"
 ]
}

 The dataset includes 92410568 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052327-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t8zw68
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.729449 -37.220159, 147.729449 -37.231388, 147.731695 -37.231388, 147.731695 -37.235879, 147.736186 -37.235879, 147.736186 -37.231388, 147.740678 -37.231388, 147.740678 -37.229142, 147.738432 -37.229142, 147.738432 -37.226896, 147.736186 -37.226896, 147.736186 -37.222405, 147.731695 -37.222405, 147.731695 -37.220159, 147.729449 -37.220159))"
 ]
}

 The dataset includes 41 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052343-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ezhrm8
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is ECU.12_1",
 "TaxonKey is Pelargonium odoratissimum (L.) L'Hér."
 ]
}

 The dataset includes 9 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052344-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2nbp6n
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pasiphaea gracilis Hayashi, 1999",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052345-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fub7hr
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ecpoma gigantostipula (K.Schum.) N.Hallé"
 ]
}

 The dataset includes 58 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052346-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vjjdhy
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gaertnera fissistipula (K.Schum. & K.Krause) E.M.A.Petit"
 ]
}

 The dataset includes 16 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052348-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.grkhsc
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Sepiella japonica Sasaki, 1929",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052349-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.