cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.e3vtc2
title: Occurrence Download

description: A dataset containing 28079 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sagina micropetala Rauschert, Sagina nodosa (L.) Fenzl)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 28079 records from 181 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0252152-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.18132538
title: Additional file 4 of Edaravone activates the GDNF/RET neurotrophic signaling pathway and protects mRNA-induced motor neurons from iPS cells

description: Additional file 4: Table S3. Expression data of all genes detected by RNA-seq.
DOI: 10.6084/m9.figshare.14462622
title: Additional file 2 of Transcriptome profiling of immune response to Yersinia ruckeri in spleen of rainbow trout (Oncorhynchus mykiss)

description: Additional file 2.
DOI: 10.6084/m9.figshare.14462622.v1
title: Additional file 2 of Transcriptome profiling of immune response to Yersinia ruckeri in spleen of rainbow trout (Oncorhynchus mykiss)

description: Additional file 2.
DOI: 10.5281/zenodo.10669801
title: Test_file
DOI: 10.5281/zenodo.10669802
title: Test_file
DOI: 10.5281/zenodo.10669858
title: Test_file
DOI: 10.5281/zenodo.10669915
title: Test_file
DOI: 10.6084/m9.figshare.18132646
title: Additional file 2 of Treatment with soluble CD24 attenuates COVID-19-associated systemic immunopathology

description: Additional file 2. Table S3. Cytokine concentrations from plasma samples, as measured by multiplex ELISA.
DOI: 10.6084/m9.figshare.18132541
title: Additional file 5 of Edaravone activates the GDNF/RET neurotrophic signaling pathway and protects mRNA-induced motor neurons from iPS cells

description: Additional file 5: Table S4. IPA signaling pathways enriched in edaravone up-regulated genes.
DOI: 10.6084/m9.figshare.14462794.v1
title: Additional file 2 of AFLAP: assembly-free linkage analysis pipeline using k-mers from genome sequencing data

description: Additional file 2: Table S1. A pedigree file which could be used to run AFLAP, includes accession numbers for A. thaliana WGS reads used.
DOI: 10.6084/m9.figshare.14462794
title: Additional file 2 of AFLAP: assembly-free linkage analysis pipeline using k-mers from genome sequencing data

description: Additional file 2: Table S1. A pedigree file which could be used to run AFLAP, includes accession numbers for A. thaliana WGS reads used.
DOI: 10.5281/zenodo.10669894
title: Dataset for Broadening Applicability of the Poor Academic's Method for Reversing Polarity in Redox Flow Cell Cycling

description: Dataset of the results published in ChemElectroChem 2024, 11, e202300525 (doi.org/10.1002/celc.202300525). 

The use of symmetrical cells is becoming popular for the search of new electroactive materials in redox flow batteries. Unfortunately, low-cost battery cyclers, commonly used for electrochemical battery testing, are not compatible with symmetrical cells since they usually cannot apply negative bias voltages needed for symmetrical cells. The insertion of a Ni-Cd battery in the voltage sensing path is a simple and effective methodology to overcome this limitation for certain battery cyclers. Herein, the validity of this useful method is evaluated for other battery cyclers, realizing that the strategy is not universal. A modified methodology is developed for a battery cycler in which the previous method is not valid. The new strategy is based on inserting a Ni-MH battery in the current path, and enables using a low-cost Neware CT-4008T-5V6A-S1 cycler for ferro- /ferricyanide symmetrical cells demonstrating proper operation for >19 days. This new method possesses advantages, e.g. direct reading of the cell voltage, and disadvantages, e.g. the Ni-MH battery is charged/discharged during operation, which are discussed. The four battery cyclers evaluated shows that, despite neither method is universal, both methods are complementary to each other. Thus, the decision of using either one method or the other must be reached on a case-by-case basis.
DOI: 10.5281/zenodo.10669895
title: Dataset for Broadening Applicability of the Poor Academic's Method for Reversing Polarity in Redox Flow Cell Cycling

description: Dataset of the results published in ChemElectroChem 2024, 11, e202300525 (doi.org/10.1002/celc.202300525). 

The use of symmetrical cells is becoming popular for the search of new electroactive materials in redox flow batteries. Unfortunately, low-cost battery cyclers, commonly used for electrochemical battery testing, are not compatible with symmetrical cells since they usually cannot apply negative bias voltages needed for symmetrical cells. The insertion of a Ni-Cd battery in the voltage sensing path is a simple and effective methodology to overcome this limitation for certain battery cyclers. Herein, the validity of this useful method is evaluated for other battery cyclers, realizing that the strategy is not universal. A modified methodology is developed for a battery cycler in which the previous method is not valid. The new strategy is based on inserting a Ni-MH battery in the current path, and enables using a low-cost Neware CT-4008T-5V6A-S1 cycler for ferro- /ferricyanide symmetrical cells demonstrating proper operation for >19 days. This new method possesses advantages, e.g. direct reading of the cell voltage, and disadvantages, e.g. the Ni-MH battery is charged/discharged during operation, which are discussed. The four battery cyclers evaluated shows that, despite neither method is universal, both methods are complementary to each other. Thus, the decision of using either one method or the other must be reached on a case-by-case basis.
DOI: 10.57745/rzktqe
title: talnarchives-scienceouverte.zip

description: Dossier comportant 3 sous-répertoires correspondant respectivement aux actes des conférences TALN, RECITAL et des ateliers associés. Les méta-données des actes sont décrites dans le fichier README.md
DOI: 10.6084/m9.figshare.14462740.v1
title: Additional file 2 of Genome-wide identification and functional characterization of LEA genes during seed development process in linseed flax (Linum usitatissimum L.)

description: Additional file 2: Supplementary Table 1 Subcellular localization prediction of all the 50 LuLEA genes.
DOI: 10.6084/m9.figshare.14462740
title: Additional file 2 of Genome-wide identification and functional characterization of LEA genes during seed development process in linseed flax (Linum usitatissimum L.)

description: Additional file 2: Supplementary Table 1 Subcellular localization prediction of all the 50 LuLEA genes.
DOI: 10.5281/zenodo.10669812
title: MinION sequencing of SAMD00180470

description: Data from https://doi.org/10.1128/MRA.01212-19 via https://ddbj.nig.ac.jp/public/ddbj_database/dra/fastq/DRA008/DRA008776/DRX178031/

This is a re-issue of https://zenodo.org/records/4534098 due to the original files consisting of multiple concatenated bzip2 files, they contain far too many `BZh9` sequences (expected in the bzip compression level 9 header), resulting in a number of tools such as FastQC and Trimmomatic failing to process them with strange errors.
DOI: 10.5281/zenodo.4304327
title: MinION sequencing of SAMD00180470

description: Data from https://doi.org/10.1128/MRA.01212-19 via https://ddbj.nig.ac.jp/public/ddbj_database/dra/fastq/DRA008/DRA008776/DRX178031/

This is a re-issue of https://zenodo.org/records/4534098 due to the original files consisting of multiple concatenated bzip2 files, they contain far too many `BZh9` sequences (expected in the bzip compression level 9 header), resulting in a number of tools such as FastQC and Trimmomatic failing to process them with strange errors.
DOI: 10.5281/zenodo.4304328
title: MinION sequencing of SAMD00180470

description: Data from https://doi.org/10.1128/MRA.01212-19
DOI: 10.5281/zenodo.4534098
title: MinION sequencing of SAMD00180470

description: Data from https://doi.org/10.1128/MRA.01212-19
DOI: 10.6084/m9.figshare.17084270
title: Additional file 1 of Inhibition of matrix stiffness relating integrin β1 signaling pathway inhibits tumor growth in vitro and in hepatocellular cancer xenografts

description: Additional file 1.
DOI: 10.6084/m9.figshare.14462772
title: Additional file 2 of Dynamics of rumen gene expression, microbiome colonization, and their interplay in goats

description: Additional file 2: Table S19. Genera in each microbial module.
DOI: 10.6084/m9.figshare.17084384
title: Additional file 2 of Prediction of the CYP2D6 enzymatic activity based on investigating of the CYP2D6 genotypes around the vivax malaria patients in Yunnan Province, China

description: Additional file 2. Records of basic personal information of subjects
DOI: 10.6084/m9.figshare.18132711.v1
title: Additional file 3 of Knockout of circRNAs by base editing back-splice sites of circularized exons

description: Additional file 3:. Table S2. List of oligonucleotides and primer sequences used in this study. (A) Sequences of oligonucleotides used in sgRNA constructs. (B) On-target primer sequences used in genomic DNA amplification. (C) The gRNA-dependent off-target primer sequences used in genomic DNA amplification. (D) Primer sequences used in RT-qPCR and RT-PCR analysis. (E) Primer sequences used in NB. (F) Sequences of oligonucleotides used in shRNA constructs
DOI: 10.6084/m9.figshare.14462772.v1
title: Additional file 2 of Dynamics of rumen gene expression, microbiome colonization, and their interplay in goats

description: Additional file 2: Table S19. Genera in each microbial module.
DOI: 10.6084/m9.figshare.18132708.v1
title: Additional file 2 of Knockout of circRNAs by base editing back-splice sites of circularized exons

description: Additional file 2:. Table S1. List of high-confidence circRNAs in 293FT Cells. High-confidence circRNAs was determined from ribo–, poly(A)– and RNaseR-treated RNA-seq in 293FT cells, shown by circRNA location, strand, gene symbol, transcript ID, included exons, FPB in ribo–, p(A)– and RNaseR-treated samples, whether can be targeted by hA3A-eBE-Y130F or ABEmax, whether have predominantly bs-exons, and whether have novel bs-exons
DOI: 10.6084/m9.figshare.17084270.v1
title: Additional file 1 of Inhibition of matrix stiffness relating integrin β1 signaling pathway inhibits tumor growth in vitro and in hepatocellular cancer xenografts

description: Additional file 1.
DOI: 10.6084/m9.figshare.18132711
title: Additional file 3 of Knockout of circRNAs by base editing back-splice sites of circularized exons

description: Additional file 3:. Table S2. List of oligonucleotides and primer sequences used in this study. (A) Sequences of oligonucleotides used in sgRNA constructs. (B) On-target primer sequences used in genomic DNA amplification. (C) The gRNA-dependent off-target primer sequences used in genomic DNA amplification. (D) Primer sequences used in RT-qPCR and RT-PCR analysis. (E) Primer sequences used in NB. (F) Sequences of oligonucleotides used in shRNA constructs
DOI: 10.6084/m9.figshare.18132708
title: Additional file 2 of Knockout of circRNAs by base editing back-splice sites of circularized exons

description: Additional file 2:. Table S1. List of high-confidence circRNAs in 293FT Cells. High-confidence circRNAs was determined from ribo–, poly(A)– and RNaseR-treated RNA-seq in 293FT cells, shown by circRNA location, strand, gene symbol, transcript ID, included exons, FPB in ribo–, p(A)– and RNaseR-treated samples, whether can be targeted by hA3A-eBE-Y130F or ABEmax, whether have predominantly bs-exons, and whether have novel bs-exons
DOI: 10.6084/m9.figshare.17084384.v1
title: Additional file 2 of Prediction of the CYP2D6 enzymatic activity based on investigating of the CYP2D6 genotypes around the vivax malaria patients in Yunnan Province, China

description: Additional file 2. Records of basic personal information of subjects
DOI: 10.6084/m9.figshare.19703723
title: Additional file 3 of Rice (Oryza sativa L.) cytochrome P450 protein 716A subfamily CYP716A16 regulates disease resistance

description: Additional file 3: Supplementary Table S2. Differentially expressed genes between WT and CYP716A16-OE lines.
DOI: 10.6084/m9.figshare.19703723.v1
title: Additional file 3 of Rice (Oryza sativa L.) cytochrome P450 protein 716A subfamily CYP716A16 regulates disease resistance

description: Additional file 3: Supplementary Table S2. Differentially expressed genes between WT and CYP716A16-OE lines.
DOI: 10.25828/xehh-jk85
title: Early Learning Outcomes Measure 2019: Grade R Assessment
DOI: 10.15468/dl.3gn4zp
title: Occurrence Download

description: A dataset containing 10520 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caranx melampygus Cuvier, 1833"
 ]
}

 The dataset includes 10520 records from 136 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032128-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hm7iwi
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2015",
 "Month is greater than or equal to January",
 "Country is United Arab Emirates",
 "TaxonKey is Peramelemorphia"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001340-150811131857512/datasets/export for details.
DOI: 10.15468/dl.mzdmcq
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "HasCoordinate is true",
 "TaxonKey is Miconia spennerostachya Naudin",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007410-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wzmf97
title: Occurrence Download

description: A dataset containing 6695 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-109.47876 -27.21485,-109.21715 -27.21485,-109.21715 -27.03701,-109.47876 -27.03701,-109.47876 -27.21485))",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 6695 records from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0266075-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rkznrf
title: Occurrence Download

description: A dataset containing 9930 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON Z((-97.87239 20.16048 0,-97.81198 20.12982 0,-97.73009 20.17387 0,-97.55399 20.24935 0,-97.85666 20.52532 0,-98.09321 20.58936 0,-98.10018 20.59587 0,-98.09822 20.60754 0,-98.12176 20.61433 0,-98.14687 20.56382 0,-98.13444 20.532 0,-98.02068 20.49179 0,-98.00107 20.44195 0,-97.98439 20.43079 0,-97.93244 20.38476 0,-97.84416 20.26621 0,-97.87239 20.16048 0))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9930 records from 127 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0286516-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eeybvd
title: Occurrence Download

description: A dataset containing 529 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Caragana halodendron (Pall.) Dum.Cours.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 529 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0052275-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nvj4cn
title: Occurrence Download

description: A dataset containing 420 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Planktic foraminifera abundance of Hole 33-318"
 ]
}

 The dataset includes 420 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001340-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.55gzqj
title: Occurrence Download

description: A dataset containing 14411 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Jardín Botánico Atlántico, Gijón/Xixón: Herbarium JBAG-Laínz"
 ]
}

 The dataset includes 14411 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023365-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wvzsfi
title: Occurrence Download

description: A dataset containing 490 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Membras martinica (Valenciennes, 1835)",
 "Country is United States of America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is less than or equal to 1980",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 490 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007410-180412121330197/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kuy7g5
title: Occurrence Download

description: A dataset containing 26059 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Malaysia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Bucerotiformes",
 "Year 1990-2021"
 ]
}

 The dataset includes 26059 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0286515-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.30uqxt
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Oecomys trinitatis (J.A.Allen & Chapman, 1893)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 70 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001341-150422101436696/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x4gt3k
title: Occurrence Download

description: A dataset containing 2702 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry MULTIPOLYGON(((-71.73871 -42.08309,-71.74162 -42.08381,-71.73365 -42.09138,-71.72719 -42.10157,-71.72849 -42.10674,-71.72612 -42.11024,-71.73098 -42.12229,-71.74528 -42.12756,-71.74751 -42.13046,-71.7578 -42.12836,-71.77725 -42.13023,-71.77456 -42.13642,-71.77779 -42.13915,-71.77632 -42.14281,-71.78143 -42.1479,-71.7876 -42.26021,-71.60607 -42.26557,-71.59686 -42.09065,-71.61498 -42.08679,-71.73871 -42.08309)))",
 "EventDate is less than or equal to 2021-03-25"
 ]
}

 The dataset includes 2702 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0241152-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.l3lx3n
title: Occurrence Download

description: A dataset containing 581 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Celestus montanus (Schmidt, 1933)",
 "TaxonKey is Amazilia luciae (Lawrence, 1868)",
 "TaxonKey is Dasyprocta ruatanica Thomas, 1901"
 ]
}

 The dataset includes 581 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007410-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25913200
title: A specific innate immune response silences the virulence of Pseudomonas aeruginosa in a latent infection model in the Drosophila melanogaster model

description: Environmentally ubiquitous bacteria have acquired extensive abilities to adapt to variable environments, bestowing to some of them the potential to become opportunistic pathogens. This may translate into distinct infection modes according to the route of entry. Whereas Pseudomonas aeruginosa is considered to have two major modes of infection, acute by planktonic cells or chronic through the establishment of biofilms, we report here a novel type of infection whereby ingested bacteria escape from the digestive tract and silently colonize tissues as single cells without strongly affecting the lifespan of the Drosophila host. The bacteria appear to be dormant, a feature shared with persister cells that elude the action of antibiotics. They are characterized by distinct bacterial and colony morphologies, cell surface and motility properties. Their virulence program can nevertheless be reactivated spontaneously or upon injury. We also report that an important host defense of invertebrates, melanization, is activated upon escape of the bacteria into the internal milieu. This activation not only promotes the dormancy of the colonizing bacteria but also protects the host to some degree against secondary infections. As P. aeruginosa is a member of the microbiota of a sizable fraction of human populations, these discoveries may become medically relevant.This article has been formally accetpted by Plos Pathogens, the DOI number for it is: 10.1371/journal.ppat.1012252.