cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10302174
title: Survey data on attitudes towards salmon aquaculture industry in Norway, Iceland, and Tasmania (AU)

description: The following data is from an online survey conducted in Norway, Tasmania (Australia), and Iceland. Respondents were recruited by survey companies that distributed e-mail invitations to their panels. A minimum respondent quotas was established for each region, with individuals under the age of 18 being exluded from participating in the survey. The dataset consists of a total of 2085 respondents, comprising 1183 participants from Norway, 406 from Tasmania, and 496 from Iceland. Questions were presented in their respective native language, namely Norwegian, English, and Icelandic.

This survey data encompasses various aspects of perceptions of salmon aquaculture industry. Data was generated by the SoLic (Social License to operate for aquaculture) project (2019 - 2022), and funded by The Research Council of Norway (no. 295114). The survey was designed by the SoLic project group. 

The data and supplementary material is divided in 3 files:

The raw survey data in .csv file format (Dataset Solic_2085 respondents.csv). The data file contains 71 variables and data from each of the 2085 respondents. Blank entries in the dataset indicate either a lack of response from the respondents or that specific questions were not applicable to certain respondents (questions exclusively posed to respondents in one country).

Overview of survey questions and answer options (Survey.doc). The survey encompassed 28 questions related to the aquaculture industry, along with demographics, respondents’ knowledge of industry, trust in governance system, and environmental concerns. Some demographic variables were sourced from the existing panel data, while others were provided to respondents for their input.

The codebook (Codebook.doc). The codebook provides explanations and details regarding all variables included in the survey data file. It includes coding information for each survey question, response options provided in the raw data, and further clarifies the purpose and origin of variables computed by the research group (e.g., variable on aquaculture municipality) or the survey company (e.g., weight variables for data from Norway and Iceland). When used in conjunction with the raw data, this codebook serves as a valuable guide for navigating the dataset.
DOI: 10.5281/zenodo.4114854
title: Single-cell profiling identifies pre-existing CD19-negative subclones in a B-ALL patient with CD19-negative relapse after CAR-T therapy

description: This repository contains necessary files for reproducing the analysis in Rabilloud, Potier et al. (2020). The instructions for reproducing the analysis are given in github (https://github.com/Delphine-Potier/B-ALL-CAR-T) and extra files are available in GEO/SRA (GSE153697 ; SRP269742).
DOI: 10.5282/ubm/data.405
title: R-scripts and data of coefficient corrections developed since 2017 for the Niton XL3t No. 97390 following the Munich Procedure

description: This data set relates to portable X-ray fluorescence (p-XRF) data. It contains, on the one hand, a R-Skript describing the Munich Procedure, an improved way of developing and selecting linear regressions by defining quality benchmarks for the correction criteria and hence the coefficient correction factors derived from them. It also includes its application to Niton XL3t data: In total, four coefficient corrections based on the comparison of WD-XRF and p-XRF data generated from the same ancient pottery sample set and five coefficient corrections for intra-device adjustment are presented. Analytical, processed and scripted data as well as graphical output is provided. The scripted data include R-scripts for each coefficient correction and an additional R-script explaining the calculations and decision making processes when applying the Munich Procedure.
DOI: 10.7488/ds/2757
title: Informal settlement dwellings mapped from LiDAR for selected informal settlements in Cape Town

description: This dataset consists of polygons delineating informal dwelling roofs for selected informal settlements in Cape Town. The polygons were derived from LiDAR data made available from the City of Cape Town and mapped by Adedayo Adeleke of University of Cape Town for the purposes of this paper which was a collaboration between Dr Adeleke and University of Edinburgh. The methodology used by Dr Adeleke is detailed in the accompanying paper.
DOI: 10.15151/esrf-es-891426152
title: Exploring the local structure of complex doped ceria systems by PDF analyses

description: With the proposed experiment we aim to perform pair distribution function (PDF) analyses on 16 samples belonging to the Ce1-x(Nd0.74Tm0.26)xO2-x/2 and the Ce1-x(Nd0.63Dy0.37)xO2-x/2 systems (x= 0.05-0.60). PDF analyses will be performed to gain information on the local structure of the present systems, trying to unravel the non-trivial relationship between their ionic conductivity and local structure. In fact, in Ce1-xRExO2-x/2 systems (RE= trivalent rare earth ion), the high ionic conductivity observed between 673 and 973 K at low dopant amount is strictly related to the structural properties, even at the local scale, and to the occurrence of defect aggregates. Consequently, an in-depth structural study is fundamental to evaluate the chemical nature and the amount of the doping ions giving rise to the most efficient electrolytes for a possible application in solid oxide cells working at the intermediate temperature range.
DOI: 10.17632/f5mtdbkr3r.1
title: Data describing effects of different phosphorus concentrations on growth and chymotrypsin inhibitors in Microcystis aeruginosa NIVA Cya 43 using LC-MS

description: These data will contribute to a deeper understanding of the intricate relationship between nutrient availability, growth dynamics, and inhibitor production in cyanobacteria.
DOI: 10.17632/pxvd47zxtz.2
title: The magneto-microbiome: a dataset of the metagenomic distribution of magnetotactic bacteria

description: This dataset contains counts of reads from the NCBI Sequence Read Archive (SRA) that have been taxonomically assigned to various magnetotactic bacteria.  Please use these data to identify specific magnetotactic bacteria, environments, or hosts for future study.
DOI: 10.23708/1ajnmp
title: Various PAD/LAD estimators implemented in AMAPVox 1.8

description: This note briefly describes the implementation of various estimators of PAD/LAD provided in AMAPVox &gt;= 1.8
DOI: 10.25540/dnbb-gfd0
title: Singapore Longitudinal EArly Development Study (SG LEADS)
DOI: 10.25592/uhhfdm.12928
title: Causal role of the angular gyrus in insight-driven memory reconfiguration

description: Maintaining an accurate model of the world relies on our ability to update memory representations in light of new information. Previous research on the integration of new information into memory mainly focused on the hippocampus. Here, we hypothesized that the angular gyrus, known to be involved in episodic memory and imagination, plays a pivotal role in the insight-driven reconfiguration of memory representations. To test this hypothesis, participants received continuous theta burst stimulation (cTBS) inhibiting the left angular gyrus or sham stimulation before gaining insight into the relationship between previously separate life-like animated events in a narrative-insight task. During this task, participants also underwent EEG recording and their memory for linked and non-linked events was assessed shortly thereafter. Our results show that cTBS to the angular gyrus decreased memory for the linking events and reduced the memory advantage for linked relative to non-linked events. At the neural level, cTBS-induced angular gyrus inhibition reduced centro-temporal coupling with frontal regions and abolished insight-induced neural representational changes for events linked via imagination, indicating impaired memory reconfiguration. Further, the cTBS group showed representational changes for non-linked events that resembled the patterns observed in the sham group for the linked events, suggesting failed pruning of the narrative in memory. Together, our findings demonstrate a causal role of the left angular gyrus in insight-related memory reconfigurations.
DOI: 10.5281/zenodo.10072266
title: WAM-IPE uncertainty quantification data

description: In each file, one or several specific WAM-IPE outputs (quantities of interest, QoI) and the associated parameters used in latent space to generate synthetic drivers. The parameters in latent space and the QoIs can be used to build polynomial chaos expansion based surrogate model.
DOI: 10.5281/zenodo.10532069
title: Improving the Accessibility and Efficiency of Proton Irradiations for 4He/3He Thermochronology

description: Supplementary dataset and figures accompanying a paper entitled “Improving the Accessibility and Efficiency of Proton Irradiations for 4He/3He Thermochronology” submitted to Geochemistry, Geophysics, Geosystems.

The dataset contains 4He/3He step-heating measurements on internal shards of Durango apatite that underwent proton irradiation at three different facilities: the Francis H. Burr Proton Therapy Center (FHB), the Helmholtz Zentrum Berlin (HZB), and the Paul Scherrer Insitute (PSI). Furthermore, the dataset contains bulk 4He and 3He concentrations for each shard analyzed.

The supplementary figures include 4He/3He release spectrum plots for each Durango shard analyzed, 3He concentration maps from the HZB irradiation, and detailed results of PHITS simulations used to assess the HZB irradiations.
DOI: 10.5281/zenodo.10535934
title: Cows Frontal Face Dataset

description: The dataset is one of the biggest dataset of cows having 459 classes in total. It can be utilized for various purposes related to cow identification. Our work and dataset is limited to Muzzle Detection. The recognition part will be exploring in future using the noise removal and deep learning techniques in the next versions utilizing the same dataset. A limited number of data sets are accessible for analyzing cow muzzle, with only two publicly available datasets from Australia and United States. Additionally, there is no existing method for identifying cows using AI and computer vision, which means that there are no real-time photos available for training a model. The majority of the dataset used in our research has been collected by our team. We have collected the world’s largest dataset in number of subjects in Pakistan.
DOI: 10.5281/zenodo.7823630
title: Dark Halo Craters Data

description: This dataset is a global collection of the longitude and latitude and diameters of dark halo craters. The software used to map the DHCs was Lunar QuickMap.The data for the iron content of the ejecta was found both from the Kaguya (Selene) and Clementine missions. We mapped all longitudes and latitudes of the lunar surface. We determined a crater to be a DHC if it had an ejecta pattern with visibly higher iron content than the surrounding rock. All of the counted DHCs exhibited this quality. We omitted craters that had elevated iron inside the crater rim (as opposed to in the ejecta) because the iron signature inside might result from visible mare that filled in the crater subsequent to impact. Areas associated with visible lunar maria were ignored for this particular data set. We identified and mapped craters globally that had a minimum diameter of 1 km. We mapped the section 40–70 W, 20–70 S with no minimum diameter limit. Determining whether the ejecta had an iron content pattern that is significantly different and distinctive from the surrounding rock is subjective, so we mapped craters conservatively. The surface was mapped by two different people so there could be some additional human error and slight subjectivity of DHCs. We only considered craters with a clearly identifiable ejecta pattern, and we required that the ejecta had to surround at least 25% of the crater. We allowed cases with asymmetrical ejecta. We mapped the craters in 10-degree longitude bands, first checking the iron content and ejecta pattern of craters and then confirmed the DHC with albedo satellite images. We took the longitude and latitude of the center of the crater and measured the diameter with QuickMap tools, from one rim to the other rim.<br>
DOI: 10.5281/zenodo.8348271
title: Experimental data for "Fragmentation of ice particles: laboratory experiments on graupel-graupel and graupel-snowflake collisions"

description: Graupel-graupel and graupel-snowflake collisions<br> experiments were carried out in still air conditions in the cold room of the Wind tunnel laboratory of the<br> Johannes Gutenberg University, Mainz. Graupel particles were first exposed to supersaturated air conditions, under which dendritic ice crystals have grown on their surface.<br> All fragments resulting from graupel-graupel collisions were<br> collected and investigated under a digital microscope. Fragments resulting from graupel-snowflake collisions were observed and recorded instantly after collision using a<br> holographic instrument. Number, size, area, and aspect ratio distributions of fragments were derived. These files contain data collected during the graupel-graupel and graupel-snowflake collisions. These data served for generating the figures in the publication. The files Graupel_graupel_number_CKE_mass_size.csv and Graupel_snowflake_CKE_mass_size give information on the experimental properties of the graupel-graupel and graupel-snowflake collisions, respectively.<br> For these two files, the first column gives the name of the experiment (e.g. snow1). Each line is corresponding to one collision experiment. The concrete data for each collision experiment is provided in the data file having the corresponding name, e.g., snow_data1.csv contains the data of collision experiment snow1, etc. Readme_graupel_data.txt and Readme_snow_data.txt contain collision kinetic energies of graupel-graupel and graupel-snowflake collisions, respectively. Graupel_crystal_surface.csv gives the estimated number of crystal for defined bins (Fig. 12 dashed line) on the surface of the 2 mm graupel before the collision.
DOI: 10.5281/zenodo.8400619
title: Dataset for the Rab-1A and Rab-1B antibody screening study

description: This project contains the underlying data included in a study which characterized twelve commercially-available antibodies for the two Rab1 isoforms, Rab-1A and Rab-1B. Seven antibodies were intended to target Rab-1A and five antibodies intended to target Rab-1B. The study is also available on Zenodo (https://doi.org/10.5281/zenodo.8356353).
DOI: 10.60520/ieda/113077
title: Mineral trace element data, measured clinopyroxene 87Sr/86Sr, garnet Fe3+/∑Fe for eclogite xenoliths from the Prieska domain at the western Kaapvaal craton margin (South Africa)

description: This dataset lists trace element compositions for garnet, clinopyroxene, sanidine and orthopyroxene in eclogite xenoliths from the Prieska domain at the western Kaapvaal craton margin (South Africa) obtained by laser ablation microprobe sector-field inductively-coupled plasma mass spectrometry (LAM ICPMS) using a Thermo ElementXR, as well as measured clinopyroxene 87Sr/86Sr obtained by LAM multicollector ICPMS using a Thermo NeptunePlus and garnet Fe3+/∑Fe obtained by electron probe microanalyser using the flank method.
description: Sonja Aulbach, Heidi E. Höfer, Axel Gerdes, Christel Tinguely, Anton le Roex (resubmitted after minor revision) Mélange signatures and low oxygen fugacity in eclogite xenoliths from the crust-mantle transition below a Mesoproterozoic collision belt. Journal of Geophysical Research - Solid Earth
DOI: 10.6084/m9.figshare.23391614
title: The annotation results of gene structure and functional prediction.

description:  The assembled draft genome of Yunling cattle 、annotation results of repeated sequences, gene structure and functional prediction.
DOI: 10.6084/m9.figshare.25097543
title: Seismic Tomographic Model of the Hawaiian Ridge Line 02, Kaena

description: GeophysicsTwo-dimensional seismic Vp profile from Dunn et al. (2023), including positions of the seafloor, the upper reflector, and the lower reflector along the profile. The Vp model is in netCDF-4 format and the others are in ascii format and contain the position along the line and depth below sea level. The origin of the profile is 21.48865˚N, 158.49115˚W, and the azimuth of the profile is 15,1˚ from north.Reference: R. A. Dunn, A. B. Watts, C. Xu, and D. J. Shillington (2023) A seismic tomography, gravity, and flexure study of the crust and upper mantle structure across the Hawaiian Ridge, Part 2 Ka‘ena, Journal of Geophysical Research - Solid Earth.
DOI: 10.15485/2283406
title: Geophysical and Environmental Monitoring Data, and Subsurface Flow Modelling Results for Chicken Bone Meadow, Mt. Snodgrass, Crested Butte, CO

description: This dataset includes geoelectrical monitoring data acquired between October 2021 and November 2022, soil moisture and temperature data, groundwater data obtained from borehole SNIB covering the period from June 2021 to September 2022, and hydrological modelling results. The data were acquired to investigate how variations in bedrock type and topography, and vegetation cover control subsurface flow dynamics. To provide insights into the subsurface flow dynamics and their controls, a monitoring transect was installed at the Chicken Bone Meadow, Mt. Snodgrass, Crested Butte, CO, measuring the spatio-temporal variations of soil moisture, soil and snow temperature, subsurface electrical resistivity variations, and groundwater dynamics. Field data are organized in a folder structure, with Electrical Resistivity Tomography (ERT) data being provided as one file per measurement, and data of the soil moisture and temperature sensors being provided as text files covering the entire monitoring period. The ‘Locations.csv’ file contains the location of all sensors, given in NAD83 – UTM Zone 13N. ERT monitoring data has been processed to filter data based on reciprocal errors (data with errors &gt; 30% were removed), a linear error model was fitted to each survey, and to ensure a constant set of measurements for time-lapse inversion, filtered data were interpolated and assigned a 100% measurement error. Soil moisture and temperature data were acquired at 15 min intervals, and averaged to provide 1h data. Weather data and borehole data (groundwater depth, conductivity and temperature) were acquired at 30 min intervals, and are provided as daily measurements; all measurements are averaged, except of precipitation values, which are given as daily accumulation. The hydrological model was set up along the ERT monitoring transect, and net infiltration was used as surface boundary condition and derived from the weather data. Four different results are provided, (1) results for a parameterization using hydraulic permeability and porosity as derived from the ERT data through petrophysical relationships, and (2) three simplified model results, using 1 to 3 geological layers above the bedrock. Modelling was performed using PFLOTRAN, and for each model the PFLOTRAN input files are provided. The result files include weekly hydrological modelling results (e.g., saturation, velocities, pressures), as well as the model parameterization. The dataset additionally includes a file-level metadata (flmd.csv) file that lists each file contained in the dataset with associated metadata; and a data dictionary (dd.csv) file that contains column/row headers used throughout the files along with a definition, units, and data type.
DOI: 10.17026/dans-zdn-d3x5
title: LISS panel - State of the environment and environmental policy

description: This study is about the state of the environment andenvironmental policies. This study was administered as part of the Balans voor de Leefomgeving 2020 (State of the environment) about people’s attitudes and opinionswith regard to the state of the environment and of environmental policy.
DOI: 10.17632/2mppr2fctd.1
title: Experimental dataset for riparian vegetation-sediment interactions

description: These data constitute the results from two experimental flume runs performed at the Korea Institute of Civil Engineering and Building Technology- River Experiment Center in Andong, South Korea. This dataset consists of pre and post experimental photos and one Excel file with different tabs reporting data for the channel bed elevations, vegetation characteristics, hydraulics at three cross sections, and bedload transport measurements at three cross sections. Full experimental details can be found in the Tranmer et al. (In Submission) article published here:

A.W. Tranmer, U. Ji, M. Ahn, S. Jung, E. Yager, (In Submission). Flow hydraulics, sediment supply, and bed morphodynamics as controls on erosion and deposition in and around riparian vegetation patches. Water Resources Research. 

Channel bed elevations were collected with a Reigl LMS-Z390i laser scanner with 6 mm vertical uncertainty. Laser scans were performed before and after each experiment to monitor initial and final bed conditions as well as computing DEMs of difference for each experimental run. These data are reported for each section and zone in and around the vegetation patch.

The vegetation patch consists of 89 three-year-old willows (Salix subfragilis) and characteristics are summarized in the associated tab in the spreadsheet. 

Hydraulic data were produced by near-bed ADV measurements across the channel. Three cross sections were measured located 4 m upstream of the vegetation patch (D0), through the midsection of the patch (D2), and 2 m downstream of the patch (D4). At cross sections D0 and D4 a Nortek Vectrino ADV (25 Hz, 60 s) measured the velocity at 0.25 relative flow depth from the bed (z/h). At cross section D2 through the centerline of the patch, a Sontek microADV (50 Hz, 120 s) measured velocity at 0.2 z/h. These depths were selected as they were the closest to the bed that consistently did not experience interference from mobile bedforms. 

Bedload measurements were performed at three cross sections located 4 m upstream of the vegetation patch (D0), across the upstream head of the vegetation patch (D1), and across the downstream boundary of the vegetation patch (D3). Bedload measurements used a custom bedload sampler with a 21.6 cm2 orifice and the sampler was on the bed for 2-4 min at each sampling location depending on the discharge.
DOI: 10.17632/w2m5z28cck.1
title: Data for Determination of Trace Elemental Composition of CaCO3: Application to Mass Limited Abiogenic and Biogenic Carbonates.

description: ICP data for the paper Determination of Trace Elemental Composition of CaCO3: Application to Mass Limited Abiogenic and Biogenic Carbonates.
DOI: 10.26022/ieda/112994
title: Laser Raman analysis of carbonaceous material, Catalina subduction complex, California

description: This dataset presents laser Raman analysis of carbonaceous material collected from several units within the Franciscan subduction complex exposed on Catalina Island, California. The analysis is used to determine peak metamorphic temperatures attained by three different units/lithologies within the complex.
DOI: 10.4121/21557910
title: Supporting data for the article “Forecasting of Rock Failure in the Laboratory using Active Acoustic Monitoring Methods”

description: Data from the article 'Forecasting of Rock Failure in the Laboratory using Active Acoustic Monitoring Methods'. Waveforms and loading data recorded during rock failure experiments in the TU Delft laboratory.