cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14728535.v1
title: Additional file 3 of Atg7 deficiency in microglia drives an altered transcriptomic profile associated with an impaired neuroinflammatory response

description: Additional file 3. DEG lists and KEGG pathways comparing LPS-treated shAtg7 BV2 with untreated shAtg7 BV2 cellsdat.
DOI: 10.6084/m9.figshare.14728541
title: Additional file 5 of Atg7 deficiency in microglia drives an altered transcriptomic profile associated with an impaired neuroinflammatory response

description: Additional file 5. Metascape GO term clusters for overlap with C7: immunologic signature genes.
DOI: 10.6084/m9.figshare.14728541.v1
title: Additional file 5 of Atg7 deficiency in microglia drives an altered transcriptomic profile associated with an impaired neuroinflammatory response

description: Additional file 5. Metascape GO term clusters for overlap with C7: immunologic signature genes.
DOI: 10.6084/m9.figshare.16893163
title: Additional file 1 of One year of laboratory-based COVID-19 surveillance system in Belgium: main indicators and performance of the laboratories (March 2020–21)

description: Additional file 1. Turnaround time between sampling and test result. Weekly number of tests with a test result within different timeframes after the date of sampling.
DOI: 10.6084/m9.figshare.16893163.v1
title: Additional file 1 of One year of laboratory-based COVID-19 surveillance system in Belgium: main indicators and performance of the laboratories (March 2020–21)

description: Additional file 1. Turnaround time between sampling and test result. Weekly number of tests with a test result within different timeframes after the date of sampling.
DOI: 10.6084/m9.figshare.16893166
title: Additional file 2 of One year of laboratory-based COVID-19 surveillance system in Belgium: main indicators and performance of the laboratories (March 2020–21)

description: Additional file 2. Turnaround time between test result and reporting. Weekly number of tests with the reporting of the test result to the healthdata.be platform of Sciensano within different timeframes after the date of the test result.
DOI: 10.6084/m9.figshare.16893166.v1
title: Additional file 2 of One year of laboratory-based COVID-19 surveillance system in Belgium: main indicators and performance of the laboratories (March 2020–21)

description: Additional file 2. Turnaround time between test result and reporting. Weekly number of tests with the reporting of the test result to the healthdata.be platform of Sciensano within different timeframes after the date of the test result.
DOI: 10.6084/m9.figshare.16893172
title: Additional file 3 of One year of laboratory-based COVID-19 surveillance system in Belgium: main indicators and performance of the laboratories (March 2020–21)

description: Additional file 3. Turnaround time between sampling and reporting. Weekly number of tests with the reporting of the test result to the healthdata.be platform of Sciensano within different timeframes after the date of sampling.
DOI: 10.6084/m9.figshare.16893172.v1
title: Additional file 3 of One year of laboratory-based COVID-19 surveillance system in Belgium: main indicators and performance of the laboratories (March 2020–21)

description: Additional file 3. Turnaround time between sampling and reporting. Weekly number of tests with the reporting of the test result to the healthdata.be platform of Sciensano within different timeframes after the date of sampling.
DOI: 10.6084/m9.figshare.16893184
title: Additional file 2 of Comparative transcriptome analysis identified important genes and regulatory pathways for flower color variation in Paphiopedilum hirsutissimum

description: Additional file 2: Table S2: Differentially expressed genes (DEGs) among normal and albino labellum.
DOI: 10.6084/m9.figshare.16893187
title: Additional file 3 of Comparative transcriptome analysis identified important genes and regulatory pathways for flower color variation in Paphiopedilum hirsutissimum

description: Additional file 3: Table S3: DEGs between normal and albino petals.
DOI: 10.6084/m9.figshare.16893184.v1
title: Additional file 2 of Comparative transcriptome analysis identified important genes and regulatory pathways for flower color variation in Paphiopedilum hirsutissimum

description: Additional file 2: Table S2: Differentially expressed genes (DEGs) among normal and albino labellum.
DOI: 10.6084/m9.figshare.16893187.v1
title: Additional file 3 of Comparative transcriptome analysis identified important genes and regulatory pathways for flower color variation in Paphiopedilum hirsutissimum

description: Additional file 3: Table S3: DEGs between normal and albino petals.
DOI: 10.6084/m9.figshare.16893214
title: Additional file 1 of Grass-like plants release general volatile cues attractive for gravid Anopheles gambiae sensu stricto mosquitoes

description: Additional file 1. A complete list of detected volatile organic compounds from each analysis of the different samples of Cyperus rotundus (CR), Cyperus exaltatus (CE), Cynodon dactylon (CD), Panicum repens (PR) and Cenchrus setaceum (CS).
DOI: 10.6084/m9.figshare.16893214.v1
title: Additional file 1 of Grass-like plants release general volatile cues attractive for gravid Anopheles gambiae sensu stricto mosquitoes

description: Additional file 1. A complete list of detected volatile organic compounds from each analysis of the different samples of Cyperus rotundus (CR), Cyperus exaltatus (CE), Cynodon dactylon (CD), Panicum repens (PR) and Cenchrus setaceum (CS).
DOI: 10.6084/m9.figshare.16893252
title: Additional file 12 of Stage-specific expression of an odorant receptor underlies olfactory behavioral plasticity in Spodoptera littoralis larvae

description: Additional file 12: Supplementary data.
DOI: 10.6084/m9.figshare.16893252.v1
title: Additional file 12 of Stage-specific expression of an odorant receptor underlies olfactory behavioral plasticity in Spodoptera littoralis larvae

description: Additional file 12: Supplementary data.
DOI: 10.6084/m9.figshare.16893285.v1
title: Additional file 1 of On the role of dauer in the adaptation of nematodes to a parasitic lifestyle

description: Additional file 1: Table S1. The accession numbers of homologues in parasitic nematodes of C. elegans dauer signalling pathway genes, as detected using the WormBase ParaSite (release number 14.0) BioMart orthologue finder tool (ref. [85], https://parasite.wormbase.org ) and that was the basis for the construction of the heat map in Fig. 5. If multiple homologues were detected, they are ordered from high to low % identity.
DOI: 10.6084/m9.figshare.16893285
title: Additional file 1 of On the role of dauer in the adaptation of nematodes to a parasitic lifestyle

description: Additional file 1: Table S1. The accession numbers of homologues in parasitic nematodes of C. elegans dauer signalling pathway genes, as detected using the WormBase ParaSite (release number 14.0) BioMart orthologue finder tool (ref. [85], https://parasite.wormbase.org ) and that was the basis for the construction of the heat map in Fig. 5. If multiple homologues were detected, they are ordered from high to low % identity.
DOI: 10.18434/mds2-2413
title: In-Situ Captures of AWS-1 LTE
DOI: 10.5517/ccdc.csd.cc265k87
title: CCDC 2031128: Experimental Crystal Structure Determination

description: Related Article: Tiansi Xin, Xinrui Wang, Kexin Yang, Jiefeng Liang, Wenliang Huang|2021|Inorg.Chem.|60|15321|doi:10.1021/acs.inorgchem.1c01922
DOI: 10.5517/ccdc.csd.cc265k98
title: CCDC 2031129: Experimental Crystal Structure Determination

description: Related Article: Tiansi Xin, Xinrui Wang, Kexin Yang, Jiefeng Liang, Wenliang Huang|2021|Inorg.Chem.|60|15321|doi:10.1021/acs.inorgchem.1c01922
DOI: 10.5517/ccdc.csd.cc265kb9
title: CCDC 2031130: Experimental Crystal Structure Determination

description: Related Article: Tiansi Xin, Xinrui Wang, Kexin Yang, Jiefeng Liang, Wenliang Huang|2021|Inorg.Chem.|60|15321|doi:10.1021/acs.inorgchem.1c01922
DOI: 10.5517/ccdc.csd.cc265kcb
title: CCDC 2031131: Experimental Crystal Structure Determination

description: Related Article: Tiansi Xin, Xinrui Wang, Kexin Yang, Jiefeng Liang, Wenliang Huang|2021|Inorg.Chem.|60|15321|doi:10.1021/acs.inorgchem.1c01922
DOI: 10.5517/ccdc.csd.cc265kdc
title: CCDC 2031132: Experimental Crystal Structure Determination

description: Related Article: Tiansi Xin, Xinrui Wang, Kexin Yang, Jiefeng Liang, Wenliang Huang|2021|Inorg.Chem.|60|15321|doi:10.1021/acs.inorgchem.1c01922
DOI: 10.5517/ccdc.csd.cc26v1fk
title: CCDC 2050818: Experimental Crystal Structure Determination

description: Related Article: Shane S. Galley, Scott A. Pattenaude, Debmalya Ray, Carlo Alberto Gaggioli, Megan A. Whitefoot, Yusen Qiao, Robert F. Higgins, W. L. Nelson, Ryan Baumbach, Joseph M. Sperling, Matthias Zeller, Tyler S. Collins, Eric J. Schelter, Laura Gagliardi, Thomas E. Albrecht-Schönzart, Suzanne C. Bart|2021|Inorg.Chem.|60|15242|doi:10.1021/acs.inorgchem.1c01766
DOI: 10.5517/ccdc.csd.cc26v1gl
title: CCDC 2050819: Experimental Crystal Structure Determination

description: Related Article: Shane S. Galley, Scott A. Pattenaude, Debmalya Ray, Carlo Alberto Gaggioli, Megan A. Whitefoot, Yusen Qiao, Robert F. Higgins, W. L. Nelson, Ryan Baumbach, Joseph M. Sperling, Matthias Zeller, Tyler S. Collins, Eric J. Schelter, Laura Gagliardi, Thomas E. Albrecht-Schönzart, Suzanne C. Bart|2021|Inorg.Chem.|60|15242|doi:10.1021/acs.inorgchem.1c01766
DOI: 10.5517/ccdc.csd.cc26v1hm
title: CCDC 2050820: Experimental Crystal Structure Determination

description: Related Article: Shane S. Galley, Scott A. Pattenaude, Debmalya Ray, Carlo Alberto Gaggioli, Megan A. Whitefoot, Yusen Qiao, Robert F. Higgins, W. L. Nelson, Ryan Baumbach, Joseph M. Sperling, Matthias Zeller, Tyler S. Collins, Eric J. Schelter, Laura Gagliardi, Thomas E. Albrecht-Schönzart, Suzanne C. Bart|2021|Inorg.Chem.|60|15242|doi:10.1021/acs.inorgchem.1c01766
DOI: 10.5517/ccdc.csd.cc26v1jn
title: CCDC 2050821: Experimental Crystal Structure Determination

description: Related Article: Shane S. Galley, Scott A. Pattenaude, Debmalya Ray, Carlo Alberto Gaggioli, Megan A. Whitefoot, Yusen Qiao, Robert F. Higgins, W. L. Nelson, Ryan Baumbach, Joseph M. Sperling, Matthias Zeller, Tyler S. Collins, Eric J. Schelter, Laura Gagliardi, Thomas E. Albrecht-Schönzart, Suzanne C. Bart|2021|Inorg.Chem.|60|15242|doi:10.1021/acs.inorgchem.1c01766
DOI: 10.5517/ccdc.csd.cc26v1kp
title: CCDC 2050822: Experimental Crystal Structure Determination

description: Related Article: Shane S. Galley, Scott A. Pattenaude, Debmalya Ray, Carlo Alberto Gaggioli, Megan A. Whitefoot, Yusen Qiao, Robert F. Higgins, W. L. Nelson, Ryan Baumbach, Joseph M. Sperling, Matthias Zeller, Tyler S. Collins, Eric J. Schelter, Laura Gagliardi, Thomas E. Albrecht-Schönzart, Suzanne C. Bart|2021|Inorg.Chem.|60|15242|doi:10.1021/acs.inorgchem.1c01766
DOI: 10.6084/m9.figshare.16893364.v1
title: Additional file 2 of Molecular mechanism of modulating miR482b level in tomato with botrytis cinerea infection

description: Additional file 2
DOI: 10.6084/m9.figshare.16893355.v1
title: Additional file 8 of circ_0038718 promotes colon cancer cell malignant progression via the miR-195-5p/Axin2 signaling axis and also effect Wnt/β-catenin signal pathway

description: Additional file 8: Table S5. Differential expression analyze result of mRNA.
DOI: 10.6084/m9.figshare.16893400
title: REACTOME_DATA.csv

description: MAV reactome overenrichment dataset <br>
DOI: 10.6084/m9.figshare.16893352.v1
title: Additional file 7 of circ_0038718 promotes colon cancer cell malignant progression via the miR-195-5p/Axin2 signaling axis and also effect Wnt/β-catenin signal pathway

description: Additional file 7: Table S4. Differential expression analyze result of miRNA.
DOI: 10.6084/m9.figshare.14199287.v3
title: plasmid sequences of four blaKPC-2 positive isolates (C13unicycle.fa, C26unicycle.fa, C31unicycle.fa and C39unicycle.fa) and the complete whole-genome sequences of C11 isolate (C11.fasta)

description: including four plasmids sequences and a whole-genome sequence
DOI: 10.6084/m9.figshare.16893349.v1
title: Additional file 6 of circ_0038718 promotes colon cancer cell malignant progression via the miR-195-5p/Axin2 signaling axis and also effect Wnt/β-catenin signal pathway

description: Additional file 6: Table S3. Differential expression analyze result of circRNA.
DOI: 10.6084/m9.figshare.16893346.v1
title: Additional file 5 of circ_0038718 promotes colon cancer cell malignant progression via the miR-195-5p/Axin2 signaling axis and also effect Wnt/β-catenin signal pathway

description: Additional file 5: Table S2. Mutation landscape of colon cancer cell SW480.
DOI: 10.6084/m9.figshare.16893343.v1
title: Additional file 4 of circ_0038718 promotes colon cancer cell malignant progression via the miR-195-5p/Axin2 signaling axis and also effect Wnt/β-catenin signal pathway

description: Additional file 4: Table S1. Mutation landscape of colon cancer cell HT29.
DOI: 10.6084/m9.figshare.16893406
title: SNP_MAV_ANNOTATION.csv

description: MAV SNP Annotation <br>
DOI: 10.6084/m9.figshare.16893406.v1
title: SNP_MAV_ANNOTATION.csv

description: MAV SNP Annotation <br>
DOI: 10.6084/m9.figshare.16893339.v1
title: Additional file 5 of Identification of sheep lncRNAs related to the immune response to vaccines and aluminium adjuvants

description: Additional file 5. List of the selected protein coding genes and lncRNAs for the RT-qPCR analysis and their corresponding primer sequences.
DOI: 10.6084/m9.figshare.16893336.v1
title: Additional file 4 of Identification of sheep lncRNAs related to the immune response to vaccines and aluminium adjuvants

description: Additional file 4. Full results of the co-expression analysis: Co-expression modules, hub genes, eigengenes and gene set enrichment analysis of the co-expression modules.
DOI: 10.6084/m9.figshare.16893333.v1
title: Additional file 3 of Identification of sheep lncRNAs related to the immune response to vaccines and aluminium adjuvants

description: Additional file 3. Results from the differential expression analysis in the three comparisons.
DOI: 10.6084/m9.figshare.16893330.v1
title: Additional file 2 of Identification of sheep lncRNAs related to the immune response to vaccines and aluminium adjuvants

description: Additional file 2. Conserved lncRNAs in each of the four species used for the analysis in terms of sequence and synteny.
DOI: 10.6084/m9.figshare.16893327.v1
title: Additional file 1 of Identification of sheep lncRNAs related to the immune response to vaccines and aluminium adjuvants

description: Additional file 1. Annotation of the novel sheep lncRNAs described in this study.
DOI: 10.6084/m9.figshare.16893318.v1
title: Additional file 2 of Association of identification of facility and transportation for childbirth with institutional delivery in high priority districts of Uttar Pradesh, India

description: Additional file 2. Socio-economic background and obstetric characteristics of the respondents (N = 9458). This file represents the profile of the respondents of the survey that includes their socio-economic background, antenatal care related factors, overall birth preparedness and institutional delivery rates.
DOI: 10.6084/m9.figshare.14199287
title: Plasmid sequences of four blaKPC-2 positive isolates (C13unicycle.fa, C26unicycle.fa, C31unicycle.fa and C38unicycle.fa)

description: including four plasmids sequences and a whole-genome sequence
DOI: 10.6084/m9.figshare.14199287.v5
title: Plasmid sequences of four blaKPC-2 positive isolates (C13unicycle.fa, C26unicycle.fa, C31unicycle.fa and C38unicycle.fa)

description: including four plasmids sequences and a whole-genome sequence
DOI: 10.6084/m9.figshare.14199287.v4
title: plasmid sequences of four blaKPC-2 positive isolates (C13unicycle.fa, C26unicycle.fa, C31unicycle.fa and C38unicycle.fa) and the complete whole-genome sequences of C11 isolate (C11.fasta)

description: including four plasmids sequences and a whole-genome sequence
DOI: 10.6084/m9.figshare.16893409
title: SNP_MAV_BY_STUDY.csv

description: All SNPS used in this analysis by study ( All P&lt;5E-8)<br>
DOI: 10.6084/m9.figshare.16893394
title: SNPSNAP_MATCHED_SNPS.csv

description: SNPSNAP simulated SNPS<br>
DOI: 10.6084/m9.figshare.16893364
title: Additional file 2 of Molecular mechanism of modulating miR482b level in tomato with botrytis cinerea infection

description: Additional file 2
DOI: 10.6084/m9.figshare.16893355
title: Additional file 8 of circ_0038718 promotes colon cancer cell malignant progression via the miR-195-5p/Axin2 signaling axis and also effect Wnt/β-catenin signal pathway

description: Additional file 8: Table S5. Differential expression analyze result of mRNA.
DOI: 10.6084/m9.figshare.16893352
title: Additional file 7 of circ_0038718 promotes colon cancer cell malignant progression via the miR-195-5p/Axin2 signaling axis and also effect Wnt/β-catenin signal pathway

description: Additional file 7: Table S4. Differential expression analyze result of miRNA.
DOI: 10.6084/m9.figshare.16893349
title: Additional file 6 of circ_0038718 promotes colon cancer cell malignant progression via the miR-195-5p/Axin2 signaling axis and also effect Wnt/β-catenin signal pathway

description: Additional file 6: Table S3. Differential expression analyze result of circRNA.
DOI: 10.6084/m9.figshare.16893346
title: Additional file 5 of circ_0038718 promotes colon cancer cell malignant progression via the miR-195-5p/Axin2 signaling axis and also effect Wnt/β-catenin signal pathway

description: Additional file 5: Table S2. Mutation landscape of colon cancer cell SW480.
DOI: 10.6084/m9.figshare.16893343
title: Additional file 4 of circ_0038718 promotes colon cancer cell malignant progression via the miR-195-5p/Axin2 signaling axis and also effect Wnt/β-catenin signal pathway

description: Additional file 4: Table S1. Mutation landscape of colon cancer cell HT29.
DOI: 10.6084/m9.figshare.16893339
title: Additional file 5 of Identification of sheep lncRNAs related to the immune response to vaccines and aluminium adjuvants

description: Additional file 5. List of the selected protein coding genes and lncRNAs for the RT-qPCR analysis and their corresponding primer sequences.
DOI: 10.6084/m9.figshare.16893336
title: Additional file 4 of Identification of sheep lncRNAs related to the immune response to vaccines and aluminium adjuvants

description: Additional file 4. Full results of the co-expression analysis: Co-expression modules, hub genes, eigengenes and gene set enrichment analysis of the co-expression modules.
DOI: 10.6084/m9.figshare.16893333
title: Additional file 3 of Identification of sheep lncRNAs related to the immune response to vaccines and aluminium adjuvants

description: Additional file 3. Results from the differential expression analysis in the three comparisons.
DOI: 10.6084/m9.figshare.16893330
title: Additional file 2 of Identification of sheep lncRNAs related to the immune response to vaccines and aluminium adjuvants

description: Additional file 2. Conserved lncRNAs in each of the four species used for the analysis in terms of sequence and synteny.
DOI: 10.6084/m9.figshare.16893327
title: Additional file 1 of Identification of sheep lncRNAs related to the immune response to vaccines and aluminium adjuvants

description: Additional file 1. Annotation of the novel sheep lncRNAs described in this study.
DOI: 10.6084/m9.figshare.16893318
title: Additional file 2 of Association of identification of facility and transportation for childbirth with institutional delivery in high priority districts of Uttar Pradesh, India

description: Additional file 2. Socio-economic background and obstetric characteristics of the respondents (N = 9458). This file represents the profile of the respondents of the survey that includes their socio-economic background, antenatal care related factors, overall birth preparedness and institutional delivery rates.
DOI: 10.6084/m9.figshare.16893412
title: Model to calculate benefit value of species.py

description: This is the code to run the model to calculate benefit value of species.
DOI: 10.6084/m9.figshare.16893412.v1
title: Model to calculate benefit value of species.py

description: This is the code to run the model to calculate benefit value of species.
DOI: 10.6084/m9.figshare.14593629.v1
title: Data for article "Phylogeny, biogeography, and rapid diversification of the mining bee family Andrenidae'

description: This readme.txt file was generated on 2021-SEPT-3 by Silas Bossert<br>GENERAL INFORMATION<br>This readme files describes the supplementary files associated with the research article<br>Phylogeny, biogeography, and rapid diversification of the mining bee family Andrenidae<br>by Silas Bossert, Thomas J. Wood, Sébastien Patiny, Denis Michez, Eduardo A.B. Almeida, Robert L. Minckley, Laurence Packer, John L. Neff, Robert S. Copeland, Jakub Straka, Alain Pauly, Terry Griswold, Seán G. Brady, Bryan N. Danforth, Elizabeth A. Murray<br>For questions and/or concerns please contact the lead author of the paper under silas.bossert [at] wsu.edu<br>This repository consists of 6 files.<br>###1. Supplementary_Material.pdf###<br>This Pdf file is a detailed compilation of methods and results, and is instrumental for understanding the deposited files.<br>###2. Assembly_Files.tar.gz###<br>This compressed archive contains all UCE assembly files used in this study. This includes all assembly files generated in the course of this study, as well those from previously published research as described in the Supplementary Material Pdf.<br>###2. Concatenated_Alignment.tar.gz###<br>This archive contains the concatenated DNA sequence matrix used for phylogenetic estimates.<br>###3. Gene_Trees.tar.gz###<br>This archive contains 1,388 UCE gene trees estimates with IQ-Tree 2.<br>###4. Input_Files_Information.tar.gz###<br>This file contains various input and configuration files used in the above mentioned study. Specifically, it contains the input for the following analyses: (1) Method-of-Moments estimates, (2) BioGeoBEARS analyses, (3) BAMM analyses, (4) MrBayes runs, (5) RevBayes runs, (6) Spruceup run. Lastly, it contains the file specifying the numbers used to code species diversity of Andrenidae.<br>###5. Species_Tree_Files.tar.gz###<br>This file contains all species trees generated in the study in Newick format.
DOI: 10.6084/m9.figshare.16893436
title: February 2021 Covid-19 Twitter Streaming Dataset

description: The file contains Tweet IDs* for COVID-19 related tweets collected in February, 2021 from Twitter's COVID-19 Streaming Endpoint via a custom script developed by the Social Media Lab (https://socialmedialab.ca/). Visit our interactive dashboard at https://stream.covid19misinfo.org/ for a preview and some general stats about this COVID-19 Twitter streaming dataset. For more info about Twitter's COVID-19 Streaming Endpoint, visit https://developer.twitter.com/en/docs/labs/covid19-stream/overview * Note: In accordance with Twitter API Terms, the dataset only includes Tweet IDs (as opposed to the actual tweets and associated metadata). To recollect tweets contained in this dataset, you can use programs such as Hydrator (https://github.com/DocNow/hydrator/) or the Python library Twarc (https://github.com/DocNow/twarc/).
DOI: 10.6084/m9.figshare.16893496
title: February 2021 Covid-19 + Vaccines Twitter Streaming Dataset

description: The file contains Tweet IDs* for COVID-19 related tweets collected in <b>February, 2021</b> from <b>Twitter's COVID-19 Streaming Endpoint </b>via a custom script developed by the <b>Social Media Lab (https://socialmedialab.ca/)</b>.<br>Visit <b>our interactive dashboard at https://stream.covid19misinfo.org</b>/ for a preview and some general stats about this COVID-19 Twitter streaming dataset.<br>For more info about <b>Twitter's COVID-19 Streaming Endpoint</b>, visit <b>https://developer.twitter.com/en/docs/labs/covid19-stream/overview</b><br><b>Note</b>: In accordance with Twitter API Terms, the dataset only includes Tweet IDs (as opposed to the actual tweets and associated metadata). To recollect tweets contained in this dataset, you can use programs such as Hydrator (https://github.com/DocNow/hydrator/) or the Python library Twarc (https://github.com/DocNow/twarc/).