cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19602400.v1
title: segmented_data

description: Results of the raw volume segmentation using our hybrid machine learning approach. <br> presented phases: 0 - background 1 - sand grains 2 - methane gas 3 - metahne hydrate 4 - mixture of brine and hydrate 5 - NaBr brine <br>
DOI: 10.6084/m9.figshare.19602445
title: Additional file 2 of Early cephalopod evolution clarified through Bayesian phylogenetic inference

description: Additional file 2: Data S1. Species list. This Excel file lists all species used in the analyses and includes a list of references. It furthermore lists corresponding stratigraphic horizons and their age ranges, and traditional views on the systematic assignment of each species (family and order level).
DOI: 10.6084/m9.figshare.19602445.v1
title: Additional file 2 of Early cephalopod evolution clarified through Bayesian phylogenetic inference

description: Additional file 2: Data S1. Species list. This Excel file lists all species used in the analyses and includes a list of references. It furthermore lists corresponding stratigraphic horizons and their age ranges, and traditional views on the systematic assignment of each species (family and order level).
DOI: 10.6084/m9.figshare.19602448
title: Additional file 3 of Early cephalopod evolution clarified through Bayesian phylogenetic inference

description: Additional file 3: Data S2. Measurements and conch parameters. Here, all measurements and the corresponding conch parameters for continuous characters are listed. Note that the measurements do not always represent raw values but are proportionally adjusted in cases where not all measurements could be taken from the same specimen at the same position. One specimen is always taken as reference specimen, this specimen is explicitly cited with figure and repository number. Repository numbers printed in bold represent that the specimens have not been tracked, i.e., the corresponding collections may have been moved or reorganized. Underlined repository numbers indicate that the measurements have been taken from the literature. In cases, where additional specimens were used for measurements, the values are underlined. Values that carry some uncertainty, e.g., due to poor preservation, are printed in bold. Institutional abbreviations are listed at the bottom end.
DOI: 10.6084/m9.figshare.19602451
title: Additional file 4 of Early cephalopod evolution clarified through Bayesian phylogenetic inference

description: Additional file 4: Data S3. Leaf stability indices and node distances. This Excel file contains leaf stability indices and node distances obtained from the CtCo analysis. Abbreviations: END = Endoceratoidea; MUL = Multiceratoidea; ORTH = Orthoceratoidea; PEY = Plectronocerida/Ellesmerocerida/Yanhecerida; AgeMCC = age of the taxon in the CtCo full MCC tree; lsDif = leaf stability index (difference); lsEnt = leaf stability index (entropy); lsMax =leaf stability index (maximum); ct1mean = mean node distance to the closest tip in the MCC tree; ct2mean = mean node distance to the 2nd closest tip in the MCC tree; ; ct3mean = mean node distance to the 3rd closest tip in the MCC tree); ct1max = maximum node distance to the closest tip in the MCC tree; ct2max = maximum node distance to the 2nd closest tip in the MCC tree; ; ct3max = maximum node distance to the 3rd closest tip in the MCC tree.
DOI: 10.6084/m9.figshare.19602454
title: Additional file 5 of Early cephalopod evolution clarified through Bayesian phylogenetic inference

description: Additional file 5: Data S4. Nexus files. This zip-file contains all character matrices used for the analyses, including alternative character scorings.
DOI: 10.6084/m9.figshare.19602448.v1
title: Additional file 3 of Early cephalopod evolution clarified through Bayesian phylogenetic inference

description: Additional file 3: Data S2. Measurements and conch parameters. Here, all measurements and the corresponding conch parameters for continuous characters are listed. Note that the measurements do not always represent raw values but are proportionally adjusted in cases where not all measurements could be taken from the same specimen at the same position. One specimen is always taken as reference specimen, this specimen is explicitly cited with figure and repository number. Repository numbers printed in bold represent that the specimens have not been tracked, i.e., the corresponding collections may have been moved or reorganized. Underlined repository numbers indicate that the measurements have been taken from the literature. In cases, where additional specimens were used for measurements, the values are underlined. Values that carry some uncertainty, e.g., due to poor preservation, are printed in bold. Institutional abbreviations are listed at the bottom end.
DOI: 10.6084/m9.figshare.19602451.v1
title: Additional file 4 of Early cephalopod evolution clarified through Bayesian phylogenetic inference

description: Additional file 4: Data S3. Leaf stability indices and node distances. This Excel file contains leaf stability indices and node distances obtained from the CtCo analysis. Abbreviations: END = Endoceratoidea; MUL = Multiceratoidea; ORTH = Orthoceratoidea; PEY = Plectronocerida/Ellesmerocerida/Yanhecerida; AgeMCC = age of the taxon in the CtCo full MCC tree; lsDif = leaf stability index (difference); lsEnt = leaf stability index (entropy); lsMax =leaf stability index (maximum); ct1mean = mean node distance to the closest tip in the MCC tree; ct2mean = mean node distance to the 2nd closest tip in the MCC tree; ; ct3mean = mean node distance to the 3rd closest tip in the MCC tree); ct1max = maximum node distance to the closest tip in the MCC tree; ct2max = maximum node distance to the 2nd closest tip in the MCC tree; ; ct3max = maximum node distance to the 3rd closest tip in the MCC tree.
DOI: 10.6084/m9.figshare.19602454.v1
title: Additional file 5 of Early cephalopod evolution clarified through Bayesian phylogenetic inference

description: Additional file 5: Data S4. Nexus files. This zip-file contains all character matrices used for the analyses, including alternative character scorings.
DOI: 10.6084/m9.figshare.19602457
title: Additional file 6 of Early cephalopod evolution clarified through Bayesian phylogenetic inference

description: Additional file 6: Data S5. BEAST files. All xml-files used for the analyses and the corresponding summary trees are combined in a single zip-file.
DOI: 10.6084/m9.figshare.19602457.v1
title: Additional file 6 of Early cephalopod evolution clarified through Bayesian phylogenetic inference

description: Additional file 6: Data S5. BEAST files. All xml-files used for the analyses and the corresponding summary trees are combined in a single zip-file.
DOI: 10.6084/m9.figshare.19602460
title: Additional file 7 of Early cephalopod evolution clarified through Bayesian phylogenetic inference

description: Additional file 7: Data S6. R-script. This file contains the script file that was used to calculate node distances of the closest tips.
DOI: 10.6084/m9.figshare.19602460.v1
title: Additional file 7 of Early cephalopod evolution clarified through Bayesian phylogenetic inference

description: Additional file 7: Data S6. R-script. This file contains the script file that was used to calculate node distances of the closest tips.
DOI: 10.6084/m9.figshare.19602462
title: Additional file 1 of Deep immunophenotyping reveals endometriosis is marked by dysregulation of the mononuclear phagocytic system in endometrium and peripheral blood

description: Additional file 1: Table S1. Samples used in the study. Endo: endometriosis; PE: proliferative; SE: secretory: MSE: mid secretory, LSE: late secretory; N/A: not applicable.
DOI: 10.6084/m9.figshare.19602462.v1
title: Additional file 1 of Deep immunophenotyping reveals endometriosis is marked by dysregulation of the mononuclear phagocytic system in endometrium and peripheral blood

description: Additional file 1: Table S1. Samples used in the study. Endo: endometriosis; PE: proliferative; SE: secretory: MSE: mid secretory, LSE: late secretory; N/A: not applicable.
DOI: 10.6084/m9.figshare.19602465
title: Additional file 2 of Deep immunophenotyping reveals endometriosis is marked by dysregulation of the mononuclear phagocytic system in endometrium and peripheral blood

description: Additional file 2: Table S2. CyTOF panels used in the study. Left: broad panel, right: focused panel.
DOI: 10.6084/m9.figshare.19602465.v1
title: Additional file 2 of Deep immunophenotyping reveals endometriosis is marked by dysregulation of the mononuclear phagocytic system in endometrium and peripheral blood

description: Additional file 2: Table S2. CyTOF panels used in the study. Left: broad panel, right: focused panel.
DOI: 10.6084/m9.figshare.19602489
title: Additional file 9 of Deep immunophenotyping reveals endometriosis is marked by dysregulation of the mononuclear phagocytic system in endometrium and peripheral blood

description: Additional file 9: Table S3. Expression of the significant markers between endometriosis and controls in all cell types in endometriosis versus controls from the focused panel. Significant values are highlighted in grey. Endo: endometriosis; Ctrl: controls; BH: Benjamini-Hochberg adjusted p-value.
DOI: 10.6084/m9.figshare.19602489.v1
title: Additional file 9 of Deep immunophenotyping reveals endometriosis is marked by dysregulation of the mononuclear phagocytic system in endometrium and peripheral blood

description: Additional file 9: Table S3. Expression of the significant markers between endometriosis and controls in all cell types in endometriosis versus controls from the focused panel. Significant values are highlighted in grey. Endo: endometriosis; Ctrl: controls; BH: Benjamini-Hochberg adjusted p-value.
DOI: 10.6084/m9.figshare.19602412
title: disaster assistance on multidimensional poverty.xlsx

description: The impact of disaster assistance on multidimensional poverty
DOI: 10.6084/m9.figshare.19602412.v1
title: disaster assistance on multidimensional poverty.xlsx

description: The impact of disaster assistance on multidimensional poverty
DOI: 10.34820/fk2/orzdci/ut9u0r
title: Foto Survey 2020 14

description: :unav
DOI: 10.34820/fk2/orzdci/exfn2x
title: Foto Survey 2020 11

description: :unav
DOI: 10.34820/fk2/orzdci/9i6jwf
title: Foto Survey 2020 04

description: :unav
DOI: 10.34820/fk2/orzdci/vuwpmx
title: Foto Survey 2020 08

description: :unav
DOI: 10.34820/fk2/orzdci/dnqiuq
title: Foto Survey 2020 03

description: :unav
DOI: 10.34820/fk2/orzdci/nhrki5
title: Foto Survey 2020 12

description: :unav
DOI: 10.34820/fk2/orzdci/sryexa
title: Foto Survey 2020 07

description: :unav
DOI: 10.34820/fk2/orzdci/45qcnv
title: Foto Survey 2020 10

description: :unav
DOI: 10.34820/fk2/orzdci/he63ip
title: Foto Survey 2020 02

description: :unav
DOI: 10.34820/fk2/orzdci/vyllen
title: Foto Survey 2020 01

description: :unav
DOI: 10.34820/fk2/orzdci/oajrjh
title: Foto Survey 2020 13

description: :unav
DOI: 10.34820/fk2/orzdci/ydndtl
title: Foto Survey 2020 17

description: :unav
DOI: 10.34820/fk2/orzdci/k6s97w
title: Foto Survey 2020 15

description: :unav
DOI: 10.34820/fk2/orzdci/btfq5s
title: Foto Survey 2020 18

description: :unav
DOI: 10.34820/fk2/orzdci/xsrm3u
title: Foto Survey 2020 09

description: :unav
DOI: 10.34820/fk2/orzdci/fsyyuv
title: Foto Survey 2020 16

description: :unav
DOI: 10.34820/fk2/orzdci/1zen5p
title: Foto Survey 2020 05

description: :unav
DOI: 10.34820/fk2/orzdci/bmnej9
title: Foto Survey 2020 06

description: :unav
DOI: 10.34820/fk2/orzdci
title: Suasana Taman Fotografi Bandung

description: Foto Survey Taman Fotografi (Taman Cempaka) Bandung pada 2020
DOI: 10.5281/zenodo.6462622
title: topiocqa_preprocessed

description: Data of TopiOCQA preprocessed.
DOI: 10.5281/zenodo.6462621
title: topiocqa_preprocessed

description: Data of TopiOCQA preprocessed.
DOI: 10.6084/m9.figshare.19602271
title: Data for "Bores Observed during warm season 2015-2019 over the Southern North China Plain". Submitted to GRL

description: Dataset of bores used to creat fig 1 and 2 in the manuscript submitted to GRL
DOI: 10.6084/m9.figshare.19602271.v2
title: Data for "Bores Observed during warm season 2015-2019 over the Southern North China Plain". Submitted to GRL

description: Dataset of bores used to creat fig 1 and 2 in the manuscript submitted to GRL
DOI: 10.6084/m9.figshare.19602271.v1
title: Data for "Bores Observed during warm season 2015-2019 over the Southern North China Plain". Submitted to GRL

description: Dataset of bores used in the manuscript submitted to GRL
DOI: 10.6084/m9.figshare.19602505
title: data for "Bores Observed during warm season 2015-2019 over the Southern North China Plain" submitted to GRL

description: data for fig. 1 and 2 in the manuscript
DOI: 10.6084/m9.figshare.19602505.v1
title: data for "Bores Observed during warm season 2015-2019 over the Southern North China Plain" submitted to GRL

description: data for fig. 1 and 2 in the manuscript
DOI: 10.25919/qsjq-p934
title: Experimental Data: Impact of Wearing on Filtration Performance of Electrostatic Filter Face Masks

description: Original data used in manuscript entitled “Impact of Wearing on Filtration Performance of Electrostatic Filter Face Masks” of the International Journal of Environmental Research and Public Health IJERPH to underpin findings on how wearing of respirator masks that contained electrostatically enhanced wool-polypropylene media affected performance in terms of filtration, breathing resistance, physical properties and dust loading as well as some general considerations concerning leakage.
DOI: 10.25345/c5qz22m86
title: MassIVE MSV000089259 - Protein profiles Insecticide resistant Ae. aegypti
title: Protein profiles of insecticide resistance Ae. aegypti in Penang island, Malaysia
DOI: 10.25345/c5m61bt4c
title: MassIVE Reanalysis RMSV000000654.1 - CPTAC MSV000084249/ S032 Proteogenomic Integration Reveals Therapeutic Targets in Breast Cancer Xenografts, annotation file only
title: Annotation file for CPTAC MSV000084249/ S032 Proteogenomic Integration Reveals Therapeutic Targets in Breast Cancer Xenografts
DOI: 10.5281/zenodo.6462702
title: ELAN: Codificaciones interactuantes interculturales en ELF [Tesis doctoral]-Cod_02

description: Codificaciones de las interacciones en ELF, hechas en el software ELAN en formato .eaf + densidad de anotaciones. Cod_02
DOI: 10.5281/zenodo.6462701
title: ELAN: Codificaciones interactuantes interculturales en ELF [Tesis doctoral]-Cod_02

description: Codificaciones de las interacciones en ELF, hechas en el software ELAN en formato .eaf + densidad de anotaciones. Cod_02
DOI: 10.6084/m9.figshare.19602493.v1
title: The results of a hybrid machine learning approach for segmentation of methane hydrate-bearing sample.

description: <br> This rar archive contains the result of applying the hybrid machine learning segmentation algorithm to the reconstructed CT volume obtained during the formation of methane hydrate in a sand sample. Archive content: raw_volume.tiff - CT volume acquired during a dynamic in-situ experiment at the bending magnet beamline 2-BM of the Advanced Photon Source, Argonne National Laboratory. segmented_volume.tiff - segmented CT volume with following phases: 0 - background, 1 - sand grains, 2 - methane gas, 3 - methane gas hydrate, 4 - mixture of hydrate and brine, 5 - NaBr brine. This data is refrenced in our companion paper "Enabling quantitative analysis of time-resolved CT imaging of methane-hydrate formation with a hybrid machine learning approach"
DOI: 10.25345/c5gf0n10n
title: MassIVE Reanalysis RMSV000000655.1 - CPTAC MSV000084248/ S029 Proteogenomics Connects Somatic Mutations to Signalling in Breast Cancer, annotation file only
title: Annotation file for CPTAC MSV000084248/ S029 Proteogenomics Connects Somatic Mutations to Signalling in Breast Cancer
DOI: 10.6084/m9.figshare.19602493
title: The application results of a hybrid machine learning approach for segmentation of methane hydrate-bearing sample.

description: <br> This rar archive contains the result of applying the hybrid machine learning segmentation algorithm to the reconstructed CT volume obtained during the formation of methane hydrate in a sand sample. Archive content: raw_volume.tiff - CT volume acquired during a dynamic in-situ experiment at the bending magnet beamline 2-BM of the Advanced Photon Source, Argonne National Laboratory. segmented_volume.tiff - segmented CT volume with following phases: 0 - background, 1 - sand grains, 2 - methane gas, 3 - methane gas hydrate, 4 - mixture of hydrate and brine, 5 - NaBr brine. This data is refrenced in our companion paper "Enabling quantitative analysis of time-resolved CT imaging of methane-hydrate formation with a hybrid machine learning approach"
DOI: 10.6084/m9.figshare.19602493.v2
title: The aplication results of a hybrid machine learning approach for segmentation of methane hydrate-bearing sample.

description: <br> This rar archive contains the result of applying the hybrid machine learning segmentation algorithm to the reconstructed CT volume obtained during the formation of methane hydrate in a sand sample. Archive content: raw_volume.tiff - CT volume acquired during a dynamic in-situ experiment at the bending magnet beamline 2-BM of the Advanced Photon Source, Argonne National Laboratory. segmented_volume.tiff - segmented CT volume with following phases: 0 - background, 1 - sand grains, 2 - methane gas, 3 - methane gas hydrate, 4 - mixture of hydrate and brine, 5 - NaBr brine. This data is refrenced in our companion paper "Enabling quantitative analysis of time-resolved CT imaging of methane-hydrate formation with a hybrid machine learning approach"
DOI: 10.25345/c5br8mk85
title: MassIVE Reanalysis RMSV000000656.1 - CPTAC MSV000084250/ S034 APOBEC3A is an Oral Cancer Prognostic Biomarker in Taiwanese Carriers of an APOBEC Deletion Polymorphism, annotation file only
title: Annotation file for CPTAC MSV000084250/ S034 APOBEC3A is an Oral Cancer Prognostic Biomarker in Taiwanese Carriers of an APOBEC Deletion Polymorphism
DOI: 10.25345/c5707ws4b
title: MassIVE Reanalysis RMSV000000657.1 - CPTAC MSV000084265/ S036 Reproducible Workflow for Multiplexed Deep-Scale Proteome and Phosphoproteome Analysis of Tumor Tissues by Liquid Chromatography-Mass Spectrometry, annotation file only
title: Annotation file for CPTAC MSV000084265/ S036 Reproducible Workflow for Multiplexed Deep-Scale Proteome and Phosphoproteome Analysis of Tumor Tissues by Liquid Chromatography-Mass Spectrometry
DOI: 10.5281/zenodo.6462718
title: Quora Insincere Questions Classification

description: https://www.kaggle.com/c/quora-insincere-questions-classification The Kaggle dataset is quite heavy and it may be too difficult for your laptops to perform the computations. Therefore, we provide you with <strong>the train dataset</strong> (to be sampled) and also <strong>light word embeddings</strong>, which you can download
DOI: 10.5281/zenodo.6462717
title: Quora Insincere Questions Classification

description: https://www.kaggle.com/c/quora-insincere-questions-classification The Kaggle dataset is quite heavy and it may be too difficult for your laptops to perform the computations. Therefore, we provide you with <strong>the train dataset</strong> (to be sampled) and also <strong>light word embeddings</strong>, which you can download
DOI: 10.25345/c53776000
title: MassIVE Reanalysis RMSV000000658.1 - CPTAC MSV000083050/ S040 Mass spectrometry-based proteomics reveals potential roles of NEK9 and MAP2K4 in resistance to PI3K inhibitors in triple negative breast cancer, annotation file only
title: Annotation file for CPTAC MSV000083050/ S040 Mass spectrometry-based proteomics reveals potential roles of NEK9 and MAP2K4 in resistance to PI3K inhibitors in triple negative breast cancer
DOI: 10.6084/m9.figshare.19603291
title: SNPdata_Phascolarctos_cinereus

description: Refer to README document for description of data
DOI: 10.6084/m9.figshare.19603291.v1
title: SNPdata_Phascolarctos_cinereus

description: Refer to README document for description of data
DOI: 10.15151/esrf-es-686546178
title: ITABAG: 3D structures of macromolecules related to human health

description: The ITABAG includes structural biologists from Universities, National Research Council and Hospital research centres in Italy. The laboratories apply various diffraction methods to study the structure-function relationships in various macromolecules. A unifying factor for the vast majority of the macromolecules under study is that they are related to human health, either directly, being human proteins involved in some disease, or indirectly, as proteins expressed by human pathogens and validated as potential pharmacological targets. Other projects investigate basic chemical processes, such as crystal growth and polymer association and formation of nanostructures.
DOI: 10.15151/esrf-es-700318574
title: PROTEINS RELATED TO PATHOGENESIS OF DISEASES, VIRAL PROTEINS, CELL DIVISION, SIGNALLING AND CHROMATIN PROCESSES

description: Our BAG is composed of eight PIs at six different institutions in Italy and Austria. We focus on a large variety of human, bacterial, viral and synthetic protein targets and address diverse biological contexts by combining structural biology with biochemistry, biophysics, cellular and in vivo investigations.
DOI: 10.15151/esrf-es-701724328
title: NORWAY BAG

description: The fifteen PIs associated to this proposal represent the entire crystallography community in Norway and are affiliated to the major Norwegian universities. The research interests of the PIs and their collaborators revolves around topics linked to structural biology and material sciences. We apply for beam time for single- and multi-wavelength MX, Bio-SAXS and Cryo-EM, in support of our research projects funded e.g. by the Research Council of Norway and the ERC. Examples of research projects or topics are carbohydrate-active proteins of medical or bioeconomic relevance, inhibition of DNA repair enzymes, metalloprotein function and catalysis, regulation of cell-cycle processes, enzyme discovery, antibiotic resistance/drug-discovery and neurological diseases. Our overarching aim is to use bright synchrotron sources to produce high quality science.
DOI: 10.15151/esrf-es-701731480
title: IBS BAG

description: The IBS BAG includes in this proposal IBS teams and external groups from iRTSV/CEA (Grenoble), CEA-Cadarache (St Paul lez Durance) and IRBA (Brétigny-sur-Orge). We study structure-function relationships of proteins emphasizing in human health, biotechnology and methodology. Most of the projects are a continuation of the MX-2329 proposal and can be grouped in different topics as follows: host-pathogen interaction, new drug targets, fundamental cellular mechanisms, membrane proteins, intrinsically disordered proteins, biotechnological applications and methodology. Some of these projects use integrative approaches (X-ray crystallography, SAXS, NMR (and cryo-EM), together with other biophysical studies) with the aim to fully understand the complexity of the biological macromolecular systems on study. Some teams are dedicated to serial crystallography and its developments, for which the ESRF-EBS has become the perfect tool.
DOI: 10.15151/esrf-es-780020290
title: scans of styrene-butadiene rubber

description: Test experiment of raster scanning styrene-butadiene rubber samples
DOI: 10.15151/esrf-es-776740135
title: Study on Sars Cov2 S glycoprotein, plastidial polymerase PEP and Phaeodactylum cells

description: Single particle analysis of Sars Cov2 S glycoprotein and plastidial polymerase PEP Cryo tomography of Phaeodactylum cells