cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.15081651
title: The efficacy and safety of MR-HIFU and US-HIFU in treating uterine fibroids with the volume &lt;300 cm<sup>3</sup>: a meta-analysis

description: High-intensity focused ultrasound (HIFU) is a promising and non-invasive therapy for symptomatic uterine fibroids. Currently, the main image-guided methods for HIFU include magnetic resonance-guided (MR-HIFU) and ultrasound-guided (US-HIFU). However, there are few comparative studies on the therapeutic efficacy and safety of MR-HIFU and US-HIFU in treating symptomatic uterine fibroids with a volume &lt;300 cm<sup>3</sup>. We performed this meta-analysis to evaluate the efficacy and safety of MR-HIFU and US-HIFU in treating symptomatic uterine fibroids with a volume &lt;300 cm<sup>3</sup>. We searched relevant literature in PubMed, EMBASE, Cochrane Library CNKI from inception until 2021. The mean value, the proportion, and their 95% confidence intervals (CIs) were measured by random-effects models. Publication bias was assessed using funnel plots. 48 studies met our inclusion criteria—28 describing MR-HIFU and 20 describing US-HIFU. The mean non-perfused volume rate (NPVR) was 81.07% in the US-HIFU group and 58.92% in the MR-HIFU group, respectively. The mean volume reduction rates at month-3, month-6, and month-12 were 42.42, 58.72, and 65.55% in the US-HIFU group, while 34.79, 37.39, and 36.44% in the MR-HIFU group. The incidence of post-operative abdominal pain and abnormal vaginal discharge in the US-HIFU group was lower than that of MRI-HIFU. However, post-operative skin burn and sciatic nerve pain were more common in the US-HIFU group compared with MRI-HIFU. The one-year reintervention rate after MR-HIFU was 13.4%, which was higher than 5.2% in the US-HIFU group. US-HIFU may show better efficiency and safety than MR-HIFU in treating symptomatic fibroids with a volume &lt;300 cm<sup>3</sup>.
DOI: 10.22002/bseww-80110
title: Caltech Fish Counting - Domain Adaptive Object Detection Dataset 2024
title: CFC-DAOD 2024

description: A full instructional guide is provided here
CFC-DAOD is an expansion of the Caltech Fish Counting Dataset for detecting, tracking, and counting fish in sonar videos. This dataset is specifically focused on domain-adaptive object detection.
DOI: 10.17632/324kyf7czt.1
title: Raw data from the investigation of methane hydrate nucleation and growth kinetics in the methane–water and methane–methanol–water systems

description: The raw data presented in the folder "Gas hydrate kinetics CH4-MeOH-H2O" are related to the study of the of methane hydrate nucleation and growth kinetics in the methane–water and methane–methanol–water systems. The name of each subfolder indicates the composition of the aqueous solution being studied. For example, the subfolder named "1% MeOH" contains experimental data obtained during the study of the nucleation and growth of methane hydrate in the presence of an aqueous methanol solution with an alcohol concentration of one mass %. Each subfolder contains several files with an .xlsx extension. Each file consists of the raw experimental data recorded in one of the cooling-heating cycles. For example, the file named "1% MeOH_1 cycle" contains experimental data obtained for a sample of 1 mass% aqueous methanol solution in the first cooling-heating cycle. Three to five cooling-heating cycles were performed for each of the samples to obtain a statistically significant dataset for calculating methane hydrate formation probability distributions and determining methane hydrate nucleation rates. The data in the file includes time (since cycle start, column A), thermostatic bath temperature (°C, column C), and gauge pressure in Cells #1-6 (bar, columns K-P) of the RCS6 apparatus.
The raw data are associated with the articles:
[1] A.P. Semenov, T.B. Tulegenov, R.I. Mendgaziev, A.S. Stoporev, V.A. Istomin, D.V. Sergeeva, D.A. Lednev, V.A. Vinokurov, Dual nature of methanol as a thermodynamic inhibitor and kinetic promoter of methane hydrate formation in a wide concentration range, J. Mol. Liq. (2024) MOLLIQ-D-24-00296R1.
[2] A.P. Semenov, T.B. Tulegenov, R.I. Mendgaziev, A.S. Stoporev, V.A. Istomin, D. V. Sergeeva, D.A. Lednev, V.A. Vinokurov, Dataset for the investigation of the nucleation and growth kinetics of methane hydrate in the presence of aqueous methanol solutions, Data Br. in Press (2024) in Press.
DOI: 10.6084/m9.figshare.16635070.v1
title: Three mitochondrial genomes of early-winged insects (Ephemeroptera: Baetidae and Leptophlebiidae)

description: Mayflies (Ephemeroptera) are a semi-aquatic insect order with comparatively few genomic data available despite their phylogenetic position at the root of the winged-insects and possession of ancestral traits. Here, we provide three mitochondrial genomes (mtgenomes) from representatives of the two most species-rich families, <i>Baetis rutilocylindratus</i> and <i>Cloeon dipterum</i> (Baetidae), and <i>Habrophlebiodes zijinensis</i> (Leptophlebiidae). All mtgenomes had a complete set of 13 protein-coding genes and a conserved orientation except for two inverted tRNAs in <i>H. zijinensis.</i> Phylogenetic reconstructions using 21 mayfly mtgenomes and representatives of seven additional orders recovered both Baetidae and Leptophlebiidae as well supported monophyletic clades, with Ephemeroptera as the sister-taxon to all other winged insects (i.e. Odonata and Neoptera).
DOI: 10.6084/m9.figshare.15081651.v1
title: The efficacy and safety of MR-HIFU and US-HIFU in treating uterine fibroids with the volume &lt;300 cm<sup>3</sup>: a meta-analysis

description: High-intensity focused ultrasound (HIFU) is a promising and non-invasive therapy for symptomatic uterine fibroids. Currently, the main image-guided methods for HIFU include magnetic resonance-guided (MR-HIFU) and ultrasound-guided (US-HIFU). However, there are few comparative studies on the therapeutic efficacy and safety of MR-HIFU and US-HIFU in treating symptomatic uterine fibroids with a volume &lt;300 cm<sup>3</sup>. We performed this meta-analysis to evaluate the efficacy and safety of MR-HIFU and US-HIFU in treating symptomatic uterine fibroids with a volume &lt;300 cm<sup>3</sup>. We searched relevant literature in PubMed, EMBASE, Cochrane Library CNKI from inception until 2021. The mean value, the proportion, and their 95% confidence intervals (CIs) were measured by random-effects models. Publication bias was assessed using funnel plots. 48 studies met our inclusion criteria—28 describing MR-HIFU and 20 describing US-HIFU. The mean non-perfused volume rate (NPVR) was 81.07% in the US-HIFU group and 58.92% in the MR-HIFU group, respectively. The mean volume reduction rates at month-3, month-6, and month-12 were 42.42, 58.72, and 65.55% in the US-HIFU group, while 34.79, 37.39, and 36.44% in the MR-HIFU group. The incidence of post-operative abdominal pain and abnormal vaginal discharge in the US-HIFU group was lower than that of MRI-HIFU. However, post-operative skin burn and sciatic nerve pain were more common in the US-HIFU group compared with MRI-HIFU. The one-year reintervention rate after MR-HIFU was 13.4%, which was higher than 5.2% in the US-HIFU group. US-HIFU may show better efficiency and safety than MR-HIFU in treating symptomatic fibroids with a volume &lt;300 cm<sup>3</sup>.
DOI: 10.6084/m9.figshare.20296404.v1
title: Additional file 1 of Genotyping-by-Sequencing Based Investigation of Population Structure and Genome Wide Association Studies for Seven Agronomically Important Traits in a Set of 346 Oryza rufipogon Accessions

description: Additional file 1: The detailed information of Oryza rufipogon accessions investigated in current study along with their countries of origin.
DOI: 10.6084/m9.figshare.16635354.v1
title: Trace fossils, algae, invertebrate remains and new U-Pb detrital zircon geochronology from the lower Cambrian Torneträsk Formation, northern Sweden

description: Nineteen ichnotaxa, together with algal and invertebrate remains, and various pseudo-traces and sedimentary structures are described from the Torneträsk Formation exposed near Lake Torneträsk, Lapland, Sweden, representing a marked increase in the diversity of biotic traces recorded from this unit. The “lower siltstone” interval of the Torneträsk Formation contains mostly simple pascichnia, fodinichnia and domichnia burrows and trails of low-energy shoreface to intertidal settings. The assemblage has very few forms characteristic of high-energy, soft-sediment, foreshore or upper shoreface environments (representative of the <i>Skolithos</i> ichnofacies). Uranium-lead (U-Pb) LA-ICPMS analysis of zircon from a thin claystone layer within the “lower siltstone” interval yielded a maximum depositional age of 584 ± 13 Ma, mid-Ediacaran. Most of the zircon is represented by rounded detrital grains that yield dates between 3.3 and 1.0 Ga. Although the age of the basal sandstone-dominated interval of the Torneträsk Formation remains elusive owing to the absence of fossils, the ichnofossil suite from the overlying “lower siltstone” interval lacks deep arthropod trackways, such as <i>Rusophycus</i> and <i>Cruziana</i>, and is suggestive of a very early (Terreneuvian, possibly Fortunian) Cambrian age. The ichnofauna is otherwise similar to early Cambrian trace fossil assemblages from other parts of Baltica, regions further south in modern Europe, and from Greenland.
DOI: 10.6084/m9.figshare.20296407.v1
title: Additional file 2 of Genotyping-by-Sequencing Based Investigation of Population Structure and Genome Wide Association Studies for Seven Agronomically Important Traits in a Set of 346 Oryza rufipogon Accessions

description: Additional file 2: Genotypic data of studied 346 accessions.
DOI: 10.6084/m9.figshare.16640209
title: Supplementary data to publication "Untargeted metabolomics reveals metabolic stress alleviation by prepartum exercise in transition dairy cows"

description: Prepartum exercise has been proposed
as an optimal strategy for peripartum management to improve the health of dairy
cows.
However, the mechanism by which prepartum exercise impacts metabolism has not
been described in detail. Therefore, the objective of this study was to
investigate metabolic changes in transition dairy cows with and without prepartum exercise. Twenty-four Holstein transition multiparous dairy
cows were assigned to an exercise (n = 12) or control (n = 12) group, and
plasma was collected at –21, –7, 0, +7, and +30 d relative to calving. The
cows in the exercise group walked with the assistance of the researchers for
a targeted 45 min at 3.25 km/h, 2 times/d. Plasma non-esterified fatty acid (NEFA), β-hydroxybutyric acid (BHBA), glucose, and triglyceride levels
were measured, and metabolic profiles were analyzed using ultra-high-performance
liquid chromatography time-of-flight mass spectrometry. Compared with those of the control
group, the concentrations of NEFA at –7
d, glucose at 0 d, and BHBA at +7 d relative to calving were markedly
decreased
in the exercised group. Untargeted metabolomics and pathway analyses showed differences
in the levels of key metabolites and their upstream metabolites between exercise
and control cows, including gentisic acid, kynurenine, Trp, homovanillic acid, dopamine,
cis-9-palmitoleic acid, and palmitic acid. Correlation and fold change analyses
indicated that prepartum exercise may decrease homovanillic acid and
cis-9-palmitoleic acid levels and increase tryptophan and gentisic acid levels
to alleviate the metabolic stress of dairy cows during the transition period.
DOI: 10.5066/p13dfjpk
title: Community Exposure in U.S. Northern Mariana Islands to Future Coastal Flooding Hazards, reference year 2020

description: Socioeconomic impact estimates of community exposure to coastal flooding hazards are presented for communities along the coast of the U.S. Northern Mariana Islands.  The provided data were generated using the Hazard Exposure Reporting and Analytics (HERA) web application (www.usgs.gov/apps/hera/). HERA uses geospatial analysis of socioeconomic indicators (population, economic, land cover, and infrastructure) in combination with flood hazard zones developed by the USGS Pacific Coastal and Marine Science Center to quantify populations and assets at risk under present and future scenarios of sea level rise and storm conditions. The type of information includes U.S. Census data on the number of residents, C-CAP land cover estimates, and infrastructure data on roads and critical facilities from a variety of sources.
DOI: 10.6084/m9.figshare.24516930
title: Use of MHT in women with cardiovascular disease: a systematic review and meta-analysis

description: This systematic review assesses the effect of menopausal hormone therapy (MHT) on cardiovascular outcomes and risk factors in postmenopausal women with cardiovascular disease (CVD). The Medline, Embase and Cochrane databases were searched from inception to December 2022 for randomized controlled trials (RCTs) and observational studies using methodology from a previous Cochrane review. Quality assessment used the Cochrane risk of bias tool and Newcastle–Ottawa scale, respectively. From 5647 studies identified, 29 (23 RCTs and six observational studies) were included. Most studies were conducted in North America or Europe and investigated oral estrogens. Participants were older with varying frequency of cardiac risk factors and underlying CVD. No significant difference was observed between MHT users and controls regarding primary outcomes of non-fatal myocardial infarction, cardiovascular death or stroke. No difference in frequency of angina, heart failure and transient ischemic attacks was observed. Inconsistent effects of MHT on angiographic progression were seen and varied with glycemic status. Estradiol had a positive effect on flow-mediated dilatation. Limited studies identified differing effects of MHT on cardiac risk factors, varying with estrogen preparation. This study confirms no benefit of MHT for secondary CVD prevention, highlighting evidence limitations and the importance of shared decision-making when managing menopausal symptoms in women with CVD.
DOI: 10.6084/m9.figshare.24516930.v1
title: Use of MHT in women with cardiovascular disease: a systematic review and meta-analysis

description: This systematic review assesses the effect of menopausal hormone therapy (MHT) on cardiovascular outcomes and risk factors in postmenopausal women with cardiovascular disease (CVD). The Medline, Embase and Cochrane databases were searched from inception to December 2022 for randomized controlled trials (RCTs) and observational studies using methodology from a previous Cochrane review. Quality assessment used the Cochrane risk of bias tool and Newcastle–Ottawa scale, respectively. From 5647 studies identified, 29 (23 RCTs and six observational studies) were included. Most studies were conducted in North America or Europe and investigated oral estrogens. Participants were older with varying frequency of cardiac risk factors and underlying CVD. No significant difference was observed between MHT users and controls regarding primary outcomes of non-fatal myocardial infarction, cardiovascular death or stroke. No difference in frequency of angina, heart failure and transient ischemic attacks was observed. Inconsistent effects of MHT on angiographic progression were seen and varied with glycemic status. Estradiol had a positive effect on flow-mediated dilatation. Limited studies identified differing effects of MHT on cardiac risk factors, varying with estrogen preparation. This study confirms no benefit of MHT for secondary CVD prevention, highlighting evidence limitations and the importance of shared decision-making when managing menopausal symptoms in women with CVD.
DOI: 10.5066/p1jjitas
title: Community Exposure in U.S. Hawaiian Islands to Future Coastal Flooding Hazards, reference year 2020

description: Socioeconomic impact estimates of community exposure to coastal flooding hazards are presented for communities along the coast of the U.S. Hawaiian Islands.  The provided data were generated using the Hazard Exposure Reporting and Analytics (HERA) web application (www.usgs.gov/apps/hera/). HERA uses geospatial analysis of socioeconomic indicators (population, economic, land cover, and infrastructure) in combination with flood hazard zones developed by the USGS Pacific Coastal and Marine Science Center to quantify populations and assets at risk under present and future scenarios of sea level rise and storm conditions. The type of information includes U.S. Census data on the number and types of residents, InfoGroup data on numbers and types of employees, county parcel values, C-CAP land cover estimates, and infrastructure data on roads, rail, and critical facilities from a variety of sources.
DOI: 10.5066/p1zeudb5
title: Community Exposure in U.S. Guam to Future Coastal Flooding Hazards, reference year 2020

description: Socioeconomic impact estimates of community exposure to coastal flooding hazards are presented for communities along the coast of U.S. Guam.  The provided data were generated using the Hazard Exposure Reporting and Analytics (HERA) web application (www.usgs.gov/apps/hera/). HERA uses geospatial analysis of socioeconomic indicators (population, economic, land cover, and infrastructure) in combination with flood hazard zones developed by the USGS Pacific Coastal and Marine Science Center to quantify populations and assets at risk under present and future scenarios of sea level rise and storm conditions. The type of information includes U.S. Census data on the number of residents, county parcel values, C-CAP land cover estimates, and infrastructure data on roads and critical facilities from a variety of sources.
DOI: 10.6084/m9.figshare.24499314.v1
title: Additional file 1 of The relationship between depression and benign prostatic hyperplasia in middle-aged and elderly men in India: a large-scale population study

description: Additional file 1.
DOI: 10.6084/m9.figshare.8246552
title: Additional file 1: of Comparative transcriptomic and proteomic analysis of yellow shell and black shell pearl oysters, Pinctada fucata martensii

description: 21,610 annotated unigenes in transcriptome. A total of 21,610 unigenes can be annotated with public databases. (XLS 9388 kb)
DOI: 10.6084/m9.figshare.8252126.v1
title: Additional file 1: of Percutaneous full-endoscopic anterior transcorporeal cervical discectomy and channel repair: a technique note report

description: Case 2 pre-op cross section, Case 2 pre-op sagittal plane, Case 2 post-op cross section, Case 2 post-op sagittal plane, Case 3 pre-op cross section, Case 3 pre-op sagittal plane, Case 3 post-op cross section, Case 3 post-op sagittal plane, Case 4 pre-op cross section, Case 4 pre-op sagittal plane, Case 4 post-op cross section, and Case 4 post-op sagittal plane. The supplementary figures showed the pre-op and post-op MRI images of the other 3 patients. (ZIP 4930 kb)
DOI: 10.6084/m9.figshare.12441125.v1
title: Additional file 2 of Long non-coding RNAs in ovarian granulosa cells

description: Additional file 2. The eight novel lncRNAs in GCs that were associated with risk factors for OHSS.
DOI: 10.6084/m9.figshare.12441119
title: Additional file 1 of Long non-coding RNAs in ovarian granulosa cells

description: Additional file 1. The fourteen overlapping lncRNAs that are transcribed from chromosome 2 and enhancer-like lncRNAs that were differently expressed in PCOS GCs.
DOI: 10.6084/m9.figshare.8246564
title: Additional file 2: of Comparative transcriptomic and proteomic analysis of yellow shell and black shell pearl oysters, Pinctada fucata martensii

description: All differential unigenes compared T02 (Y) with T01 (B). There are 10,557 differential unigenes including 612 significant differentially expressed genes (DEGs). (XLS 5782 kb)
DOI: 10.6084/m9.figshare.8246570
title: Additional file 3: of Comparative transcriptomic and proteomic analysis of yellow shell and black shell pearl oysters, Pinctada fucata martensii

description: All differential proteins compared Y with B (quantitative). There are 1684 differential proteins quantified including 51 significant differentially expressed genes (DEPs), and another 85 proteins were qualitatively analysed. (XLS 1602 kb)
DOI: 10.6084/m9.figshare.11916861
title: Additional file 8 of FKBP9 promotes the malignant behavior of glioblastoma cells and confers resistance to endoplasmic reticulum stress inducers

description: Additional file 8: Table S2. The list of significant transcripts that caused by FKBP9 depletion of SF-539 cells. (p value&lt; 0.05, log2 fold change&gt; 1). RNA was extracted from shControl and shFKBP9 cells and RNA-Seq was performed by the Novogene Corporation (Beijing, China). The list of significant transcripts that caused by FKBP9 depletion of SF-539 cells was shown.
DOI: 10.6084/m9.figshare.11916864.v1
title: Additional file 9 of FKBP9 promotes the malignant behavior of glioblastoma cells and confers resistance to endoplasmic reticulum stress inducers

description: Additional file 9: Table S3. The FPKM value list of upregulated transcripts related to ER stress. RNA was extracted from shControl and shFKBP9 cells and RNA-Seq was performed by the Novogene Corporation (Beijing, China).The FPKM value list of transcripts that caused by FKBP9 depletion of SF-539 cells was shown.
DOI: 10.6084/m9.figshare.8246552.v1
title: Additional file 1: of Comparative transcriptomic and proteomic analysis of yellow shell and black shell pearl oysters, Pinctada fucata martensii

description: 21,610 annotated unigenes in transcriptome. A total of 21,610 unigenes can be annotated with public databases. (XLS 9388 kb)
DOI: 10.6084/m9.figshare.12441158.v1
title: Additional file 4 of Genome-wide association study identifies genetic susceptibility loci and pathways of radiation-induced acute oral mucositis

description: Additional file 4: Table S3. Association P-values for all lead SNPs for severe oral mucositis.
DOI: 10.6084/m9.figshare.12441161.v1
title: Additional file 5 of Genome-wide association study identifies genetic susceptibility loci and pathways of radiation-induced acute oral mucositis

description: Additional file 5: Table S4. All genes mapped in SNP-based (FUMA) for severe oral mucositis.
DOI: 10.6084/m9.figshare.12441164.v1
title: Additional file 6 of Genome-wide association study identifies genetic susceptibility loci and pathways of radiation-induced acute oral mucositis

description: Additional file 6: Table S5. eQTL linking GWAS risk SNPs of severe oral mucositis to mapped genes.
DOI: 10.6084/m9.figshare.8246573
title: MOESM2 of Metabolic engineering to enhance biosynthesis of both docosahexaenoic acid and odd-chain fatty acids in Schizochytrium sp. S31

description: Additional file 2: Table S1. Fatty acids profiles in the wild type, S-E, S-M and S-M-E strains. Table S2. LCâ MS metabolomics data sets of S-M and S-M-E strains. Table S3. The production cost of DHA and OCFAs in the wild type and S-M-E strains. Table S4. Primers used in this study.