cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.3h3k08d/1
title: Table S1 - Summary of all elicited changes in subjective experience
DOI: 10.5061/dryad.62fc1m4/1
title: full_dataset

description: The number of eggs (fecundity) and fertility (fertile collumn; fertile females are coded with 1 and infertile with 0) of females from scrambler (s) and fighter (f) selected lines (sel) at different temperatures (temp). Line identities are given in lineID collumn.
DOI: 10.5061/dryad.62fc1m4/2
title: fecundity_data

description: Fecundity of females that laid eggs (fertile females). These data were used in fecundity analysis. Collumn names as described for the full dataset.
DOI: 10.5061/dryad.6980c06/1
title: cART_ex1

description: Long-term viral load decay (see SSanche - PLOS One - File descriptions.docx)
DOI: 10.5061/dryad.6980c06/2
title: cART_ex2

description: Long-term viral load, file 2 (see SSanche - PLOS One - File descriptions.docx)
DOI: 10.5061/dryad.6980c06/3
title: cART_ex3

description: Long-term viral load, file 3 (see SSanche - PLOS One - File descriptions.docx)
DOI: 10.5061/dryad.6980c06/4
title: Decay_KAR_Phi5_fu35

description: see SSanche - PLOS One - File descriptions.docx
DOI: 10.5061/dryad.6980c06/5
title: Decay_KAR_Phi8_fu40

description: see SSanche - PLOS One - File descriptions.docx
DOI: 10.5061/dryad.6c78sn1/2
title: Zirbel 2018_SAS Codes

description: This is a Microsoft Word file that contains the SAS codes used to analyze data submitted for the publication on parental and offspring larval nutrient effects in Aedes aegypti mosquitoes.
DOI: 10.5061/dryad.6s48579/1
title: RMarkdown file and all input files used for publication
DOI: 10.5061/dryad.8403km4/10
title: locus47 nexus alignment

description: Nexus format alignment for locus 47, Non-specific serine/threonine protein kinase. See Table S3
DOI: 10.5061/dryad.8403km4/11
title: locus50 nexus alignment

description: Nexus format alignment for locus 50, Strictosidine synthase. See Table S3
DOI: 10.5061/dryad.8403km4/4
title: locus15 nexus alignment

description: Nexus format alignment for locus 15, 3-oxoadipate enol-lactonase. See Table S3
DOI: 10.5061/dryad.8403km4/5
title: locus33 nexus format alignment

description: Nexus format alignment for locus 33, Vinorine synthase. See Table S3
DOI: 10.5061/dryad.8403km4/6
title: locus38 nexus format alignment

description: Nexus format alignment for locus 38 2'-hydroxyisoflavone reductase. See Table S3
DOI: 10.5061/dryad.8403km4/7
title: locus40 nexus alignment

description: Nexus format alignment for locus 40, Trans-cinnamate 4-monooxygenase. See Table S3
DOI: 10.5061/dryad.8403km4/8
title: locus43 nexus alignment

description: Nexus format alignment for locus 43, 1-deoxy-D-xylulose-5-phosphate reductoisomerase. See Table S3
DOI: 10.5061/dryad.8403km4/9
title: locus45 nexus alignment

description: Nexus format alignment for locus 45, Glyoxylate reductase (NADP(+)). See Table S3
DOI: 10.5061/dryad.9hh49g6/1
title: ammonoid measurements

description: measurable ammonoid measurements data from Gujiao section, South China.
DOI: 10.5061/dryad.b30c555/1
title: molecular sexing molecular fish ID hard part analysis

description: data based on cormorant pellets collected in the field; excel file constisting of 2 tables: Table 1 has four parts providing per pellt: 1. molecular sexing of the pellets including peak heigth in capillary electrophoresis (RFU); females with 2 peaks, males with one peak; 2. molecular fish identification from pellets (presence absence data); fish species as column headers; 3. morphological analysis (count data) of fish hard parts identifiable to species level and measurable i.e. suitable for fish-length regression analysis; 4. morphological analysis: all hard parts including non-measurable ones and not to species identifiable; Table 2 contains per pellet the mean fish length (mm) per fish species
DOI: 10.5061/dryad.b30c555/2
title: Alignment CHD1 cormorant

description: Sequence alignment with male (CHD1Z) and female (CHD1W) sequences of the
chromodomain-helicase-DNA-binding protein 1 (CHD1) in 5’ – 3’ direction, including reference
sequences from GenBank (two for CHD1Z and CHD1W each). sequences
were obtained from DNA extracts of either muscle tissue of shot cormorants (K-samples) or regurgitate pellet samples collected between 29th March and 10th May 2012 at Chiemsee (S-samples).
DOI: 10.5061/dryad.bh78sn5/5
title: Mouse 6

description: Image stack and blender files with the 3D mesh data reconstructed from a 4 months old layer I somatosensory cortex neuropil
DOI: 10.5061/dryad.bh78sn5/6
title: Mouse 3

description: Image stack and blender files with the 3D mesh data reconstructed from a 4 months old layer I somatosensory cortex neuropil
DOI: 10.5061/dryad.bh78sn5/7
title: Mouse 5

description: Image stack and blender files with the 3D mesh data reconstructed from a 24 months old layer I somatosensory cortex neuropil
DOI: 10.5061/dryad.f542t16/1
title: Data_Andriuzzi_Wall_J_Animal_Ecol

description: Nematode body size and abundance data for article "Grazing and resource availability control soil nematode body size and abundance-mass relationship in semi-arid grassland"
DOI: 10.5061/dryad.hp26sv7/2
title: ESM SupportingData Androgens

description: Plasma androgen levels of white-throated sparrows. Timepoint "PRE" = collected prior to the transition to long day photoperiod, timepoint "PEAK" = collected after the transition to long day photoperiod. Values are expressed as pg/mL.
DOI: 10.5061/dryad.m2bj3nc/1
title: Tambaqui Larvae

description: This file (Tambaqui larvae.rar) contains pictures of tambaqui larvae at different dph after the bone and cartilage staining process.
DOI: 10.5061/dryad.m2bj3nc/2
title: Water and Atmospheric Temperature

description: The file "Water and Atmospheric Temperature" contains the climatic conditions data inside the climate-controlled rooms during the experiment.
DOI: 10.5061/dryad.m2bj3nc/3
title: Supplementary Material of the Article

description: This file contains the supplementary material (dendrogram and growth performance data) of the article.
DOI: 10.5061/dryad.n0d07ds/1
title: raw_data

description: The file contains all the raw data and processed FFT data for all gear running conditions
DOI: 10.5061/dryad.nd4169j/3
title: Data for nest characteristics models

description: Data table for linear mixed models (LMMs) examining whether nest-building temperature and rainfall predicted stem density around the nest or nest wall thickness (Tables 1 & 2 of published article).  Column headings: Year: year of nest construction; Plot: low, mid, or high elevation study plot; Female: unique female identifier; Nest: unique nest identifier; Elevation: elevation of nest site in m; Density: number of woody stems per square m within 1-m radius of nest; Thickness: nest wall thickness in cm; BuildingMeanMaxTemp: mean of maximum daily temperatures in degrees C recorded in the 5 days prior to clutch initiation; RainfallDuringBuilding: total rainfall in mm recorded in the 5 days prior to clutch initiation; Fledge: whether nest fledged young (1) or not (0); BuildingStart: date female initiated nest building; JDBuildingStart: Julian date that female initiated nest building.

Data were collected from a breeding population of the migratory Black-throated Blue Warbler at the Hubbard Brook Experimental Forest (HBEF), Woodstock, New Hampshire, USA (43.93N, 71.75W), from 2010-2013.
DOI: 10.5061/dryad.nd4169j/4
title: Data for brooding patterns models during the early nestling stage

description: Data table for linear mixed models (LMMs) examining whether nestling-stage temperature and rainfall and nest characteristics predicted brooding patterns over the early nestling stage (Tables 1 & 2 of published article).  Column headings: Year: year of nest construction; Plot: low, mid, or high elevation study plot; Female: unique female identifier; Nest: unique nest identifier; Elevation: elevation of nest site in m; DayOffboutDuration: mean brooding off-bout duration in s over days 3-5 of the nestling stage; DayOffboutFrequency: brooding off-bout frequency per h over days 3-5 of the nestling stage; DayPercentTimeOff: proportion of time female was off the nest over days 3-5 of the nestling stage; DayAmbMaxTemp: mean of maximum daily temperatures in degrees C recorded over days 3-5 of the nestling stage; RainfallDuringNestlingStage: total rainfall in mm recorded over days 3-5 of the nestling stage; Density: number of woody stems per square m within 1-m radius of nest; Thickness: nest wall thickness in cm; BroodSize: mean number of nestlings in the nest over days 3-5 of the nestling stage; Fledge: whether nest fledged young (1) or not (0); Hatch: date nestlings hatched; JDHatch: Julian date that nestlings hatched.

Data were collected from a breeding population of the migratory Black-throated Blue Warbler at the Hubbard Brook Experimental Forest (HBEF), Woodstock, New Hampshire, USA (43.93N, 71.75W), from 2010-2013.
DOI: 10.5061/dryad.nd4169j/5
title: Data for bihourly brooding patterns models

description: Data table for linear mixed models (LMMs) examining whether nestling-stage temperature and nest characteristics predicted bihourly brooding patterns (Tables 1 & 2 of published article).  Column headings: Year: year of nest construction; Plot: low, mid, or high elevation study plot; Female: unique female identifier; Nest: unique nest identifier; Window: identity of 2-h window over which measurements were averaged; Elevation: elevation of nest site in m; MeanOffboutDuration: mean brooding off-bout duration in s over 2-h window; OffboutFrequency: brooding off-bout frequency per h over 2-h window; PercentTimeOff: proportion of time female was off the nest over 2-h window; MeanAmbTemp: mean temperature in degrees C recorded over 2-h window; BroodSize: mean number of nestlings in the nest over days 3-5 of the nestling stage; Fledge: whether nest fledged young (1) or not (0); Hatch: date nestlings hatched; JDHatch: Julian date that nestlings hatched.

Data were collected from a breeding population of the migratory Black-throated Blue Warbler at the Hubbard Brook Experimental Forest (HBEF), Woodstock, New Hampshire, USA (43.93N, 71.75W), from 2010-2013.
DOI: 10.5061/dryad.nd4169j/6
title: Data for nestling mass model with weather and brooding

description: Data table for linear mixed model (LMM) examining whether nestling-stage temperature and rainfall and brooding patterns predicted nestling mass near fledging (Tables 1 & 2 of published article).  Column headings: Year: year of nest construction; Plot: low, mid, or high elevation study plot; Female: unique female identifier; Nest: unique nest identifier; MeanNestlingMass: mean nestling mass in g for nest on day 6 of the nestling stage; DayAmbMaxTemp: mean of maximum daily temperatures in degrees C recorded over days 3-5 of the nestling stage; RainfallDuringNestlingStage: total rainfall in mm recorded over days 3-5 of the nestling stage; DayPercentTimeOff: proportion of time female was off the nest over days 3-5 of the nestling stage; BroodSize: mean number of nestlings in the nest over days 3-5 of the nestling stage; Fledge: whether nest fledged young (1) or not (0); Hatch: date nestlings hatched; JDHatch: Julian date that nestlings hatched.

Data were collected from a breeding population of the migratory Black-throated Blue Warbler at the Hubbard Brook Experimental Forest (HBEF), Woodstock, New Hampshire, USA (43.93N, 71.75W), from 2010-2013.
DOI: 10.5061/dryad.nd4169j/7
title: Data for nestling mass model with nest location and construction

description: Data table for linear mixed model (LMM) examining whether stem density at the nest site and nest wall thickness predicted nestling mass near fledging (Tables 1 & 2 of published article).  Column headings: Year: year of nest construction; Plot: low, mid, or high elevation study plot; Female: unique female identifier; Nest: unique nest identifier; MeanNestlingMass: mean nestling mass in g for nest on day 6 of the nestling stage; Density: number of woody stems per square m within 1-m radius of nest; Thickness: nest wall thickness in cm; BroodSize: mean number of nestlings in the nest over days 3-5 of the nestling stage; Fledge: whether nest fledged young (1) or not (0); Hatch: date nestlings hatched; JDHatch: Julian date that nestlings hatched.

Data were collected from a breeding population of the migratory Black-throated Blue Warbler at the Hubbard Brook Experimental Forest (HBEF), Woodstock, New Hampshire, USA (43.93N, 71.75W), from 2010-2013.
DOI: 10.5061/dryad.nt2g6/12
title: xiphophorus_PCM_analysis (ipynb)

description: Contains the Julia commands for the PCM analyses in the manuscript. Executable IJulia notebook.
DOI: 10.5061/dryad.nt2g6/13
title: xiphophorus_PCM_analysis (html)

description: Contains the julia commands for the PCM analyses in the manuscript. Executed version of the ipynb file.
DOI: 10.5061/dryad.nt2g6/14
title: xiphophorus_networks_calibration (ipynb)

description: Code to calibrate the SNaQ networks, with comments. Executable IJulia notebook.
DOI: 10.5061/dryad.nt2g6/15
title: xiphophorus_networks_calibration (html)

description: Code to calibrate the SNaQ networks, with comments. Executed version of the ipynb file.
DOI: 10.5061/dryad.nt2g6/2
title: xiphophorus_morphology_Cui_etal_2013

description: Reduced data from Cui et al (2013).
DOI: 10.5061/dryad.nt2g6/3
title: xiphophorus_networks_calibrated

description: Calibrated networks for h=0,1,3.
DOI: 10.5061/dryad.nt2g6/7
title: xiphophorus_snaq_h0

description: Network (h=0) obtained with SNaQ with branch lengths in coalescent units.
DOI: 10.5061/dryad.nt2g6/8
title: xiphophorus_snaq_h1

description: Network (h=1) obtained with SNaQ with branch lengths in coalescent units.
DOI: 10.5061/dryad.nt2g6/9
title: xiphophorus_snaq_h3

description: Network (h=3) obtained with SNaQ with branch lengths in coalescent units.
DOI: 10.5061/dryad.qf45rf2/1
title: color_behavior_data

description: The first sheet in this file includes color pattern data for male orangethroat (OT) and rainbow (RB) darters and for male wild-caught hybrids (WH) and lab-raised hybrids (LH). Df = dorsal fin, Af = anal fin, Lat = lateral side, R = red, B = blue, PR = proportion red, PB = proportion blue. The second sheet in this file includes data from the wild-caught hybrid male aggression trials. The third sheet in this file includes data from the wild-caught hybrid male dichotomous mate choice trials.
DOI: 10.5061/dryad.s2674p8/1
title: Microsatellite_genotypes_of_Solidago_virgaurea_in_Hokkaido_Japan
DOI: 10.17632/72hxps574z.1
title: Data for: An analysis of storage revenues from the time-shifting of electrical energy in Germany and Great Britain from 2010 – 2016

description: Results from time-shifting optimisation algorithm
DOI: 10.17632/d2fc52dwrw.1
title: Data for: How should a fixed budget of dwell time be spent in scanning electron microscopy to 2 optimize image quality?

description: Supplementary material for article "How should a fixed budget of dwell time be spent in scanning electron microscopy to optimize image quality?"
DOI: 10.17632/grzm9gsk5d.1
title: Data for: Subjective Social Status is associated with compensation for large meals – a prospective pilot study

description: These files are the lunch food intake ("rawLunch" file), pre and post measure data, and meals consumed outside the lab recorded by remote food photography for this study.
DOI: 10.17632/vv5m85rnyk.1
title: Many-year zooplankton data for Lake Sevan

description: Data include the number and biomass for 9 zooplankton species Years: 1937-1964 Species: Synchaeta pentinata Keratella quadrata Filinia longiseta Pedalia mira Daphnia longispina sevanica Acanthodiaptomus denticornis Arctodiaptomus bacillifer Arctodiaptomus spinosus fadeevi Cyclops strennus sevani
DOI: 10.17632/zpnkrgcwj9.1
title: Data for: Synthesis and Synchrotron X-ray characterization of two 2D Hoffman related compounds [Ni(p-Xylylenediamine)nNi(CN)4] and [Ni(p-tetrafluoroxylylenediamine)nNi(CN)4]

description: Fig. S1. Labeling scheme for Ni-pXdam Fig. S2. Labeling Scheme for Ni-pXdamF4 Table S1. Atomic coordinates ( x 104) and equivalent isotropic displacement parameters (Å2x 103) for Ni-pXdam. U(eq) is defined as one third of the trace of the orthogonalized Uij tensor. Table S2. Bond angles (°) for Ni-pXdam. Table S3. Anisotropic displacement parameters (Å2x 103) for Ni-pXdam. The anisotropic displacement factor exponent takes the form: -22[ h2a*2U11 + ... + 2 h k a* b* U12 ] Table S4. Hydrogen coordinates ( x 104) and isotropic displacement parameters (Å2x 103) for Ni-pXdam. Table S5. Hydrogen bonds for Ni-pXdam (Å and °). Table S6. Atomic coordinates ( x 104) and equivalent isotropic displacement parameters (Å2x 103) For Ni-pXdamF4. U(eq) is defined as one third of the trace of the orthogonalized Uij tensor. Table S7. Bond angles (°) for Ni-pXdamF4. Table S8. Anisotropic displacement parameters (Å2x 103) for Ni-pXdamF4. The anisotropic displacement factor exponent takes the form: -22[ h2a*2U11 + ... + 2 h k a* b* U12 ] Table S9. Hydrogen coordinates (x 104) and isotropic displacement parameters (Å2x 103) for Ni-pXdamF4. Table S10. Hydrogen bonds for Ni-pXdamF4 (Å and °).
DOI: 10.5061/dryad.11ng449/1
title: Majgaonkar et al. Journal of Raptor research data files

description: These files list the raw data which was used to perform the analysis in the article. It contains the following: (i) Nest status at each visit for both nesting colonies (ii) Nesting and unused tree characteristics for both colonies (ii) Model fit assessment through comparing observed vs. predicted for the top models relative to global and simplified model. For any information on sampling techniques, analysis and covariates used, refer to the manuscript.
DOI: 10.5061/dryad.1d9p080/1
title: Data for Pessarrodona, Foggo and Smale 2018

description: File contains data on biomass accumulation and loss, grazer abundance (Patella pellucida and Gibbula cineraria), degradation rates and detritivore abundance in the mesh bags.
DOI: 10.5061/dryad.1fm52vv/3
title: Supplementary Table 2 (Total occurrences of Neognathodus)

description: Supplementary Table 2. Summary table showing the number of occurrences of each Neognathodus morphotype group in all examined stratigraphic intervals. Data are compiled for six previous studies (Brown et al. 1991; Rexroad et al. 1996; Rexroad et al. 1998; Rexroad et al. 2001; Brown and Rexroad 2009; Brown et al. 2016).
DOI: 10.5061/dryad.3vk16fq/1
title: Assemblage_HAB_resistance

description: This is the master program (Matlab) that is used to determine an assemblages sensitivity to allelopathy
DOI: 10.5061/dryad.4dr37pm/1
title: punjab_dryad_cleaner

description: This is a Stata version 15.1 dta file that contains data from the 2013-2014 Punjab (India) population serosurvey on hepatitis C virus. Note that variables have been cut from the dataset due to Dryad's rules on data confidentiality.
DOI: 10.5061/dryad.5hj20q2/1
title: Species-level functional trait data for 11 tropical dry forest tree and 7 tropical dry forest liana species
DOI: 10.5061/dryad.5hj20q2/2
title: Raw data for all functional trait and ecophysiology measurements made for 11 tropical dry forest tree and 7 tropical dry forest liana species in the study
DOI: 10.5061/dryad.6980c06/10
title: Decay_P4_Phi5_fu36

description: see SSanche - PLOS One - File descriptions.docx
DOI: 10.5061/dryad.6980c06/11
title: Decay_P5_Phi18_fu59

description: see SSanche - PLOS One - File descriptions.docx
DOI: 10.5061/dryad.6980c06/12
title: Decay_P6_Phi13_fu20

description: see SSanche - PLOS One - File descriptions.docx
DOI: 10.5061/dryad.6980c06/14
title: SSanche - PLOS One - File descriptions

description: File description
DOI: 10.5061/dryad.6980c06/6
title: Decay_P1_Phi5_fu47

description: see SSanche - PLOS One - File descriptions.docx
DOI: 10.5061/dryad.6980c06/7
title: Decay_P2_Phi4_fu34

description: see SSanche - PLOS One - File descriptions.docx
DOI: 10.5061/dryad.6980c06/8
title: Decay_P2_Phi10_fu40

description: see SSanche - PLOS One - File descriptions.docx
DOI: 10.5061/dryad.6980c06/9
title: Decay_P3_Phi17_fu39

description: see SSanche - PLOS One - File descriptions.docx
DOI: 10.5061/dryad.6c78sn1/1
title: Zirbel 2018_Parental transgenerational effects in Aedes aegypti

description: These are data collected in a laboratory experiment on parental and offspring larval nutrient effects in Aedes aegypti mosquitoes. These data are contained within an excel file. The first sheet in the workbook is a 'Read Me' file that contains a description of each sheet contained within and the data contained within each sheet along with any abbreviations used.
DOI: 10.5061/dryad.74v07n6/1
title: Table S1

description: Allele frequencies for microsatellite loci analyzed in the study. See Table 1 of the main text for numerical designations and descriptions of study sites, and Figure 1 of the main text for a map of the sites. Populations 1-6 are bitter cherry sites, 7-12 represent sweet cherry sites.
DOI: 10.5061/dryad.74v07n6/2
title: Individual Genotypes

description: Genotypes for microsatellite loci, in STRUCTURE format, for all individuals analyzed in the study. Numerical designations of populations, indicated in column 2, correspond to those listed in Table 1 and depicted in Figure 1 of the main text. Populations 1-6 are bitter cherry sites, 7-12 represent sweet cherry sites.
DOI: 10.5061/dryad.7qt4220/1
title: Alewife Spawning Time and Migration Files
DOI: 10.5061/dryad.98jh446/1
title: Population genomics of Honey bee from South Africa

description: Genotyping-By-Sequencing data of 474 honey bees from South Africa and a reference western honey bee
DOI: 10.5061/dryad.cg8pk0p/1
title: fordryad
DOI: 10.5061/dryad.dh46139/1
title: Phylogenetic hypothesis for early Pliensbachian ammonites

description: Phylogenetic hypothesis for early Pliensbachian ammonites of the western Tethys provided in parenthetical format for the entire dataset and for each subdataset analyzed in this study
DOI: 10.5061/dryad.dv164/1
title: geoRecHelper

description: Perl Script to edit input files for Mowgli
DOI: 10.5061/dryad.f1s76f2/16
title: Heterozygous (INV6b-C2) E17.5

description: Heterozygous inversion of the genomic region (INV6b-C2) analyzed at embryonic day E17.5
DOI: 10.5061/dryad.f1s76f2/4
title: Nkx2.2-Cre/Shhfloxed/floxed embryos E12.5

description: Nkx2.2-Cre/Shhfloxed/floxed mouse embryo analyzed at embryonic day E12.5
DOI: 10.5061/dryad.f1s76f2/6
title: Shh hypomorph mouse embryo E15.5

description: Shh hypomorph mouse embryo analyzed at embryonic day E15.5
DOI: 10.5061/dryad.f1s76f2/7
title: Col2a1-CreERT2/R26DTA mouse embryo E15.5

description: Col2a1-CreERT2/R26DTA mouse embryo injected with 2.5 mg tamoxifen at E12.5 and analysed at embryonic day E15.5
DOI: 10.5061/dryad.f1s76f2/9
title: Ascl1 knockout embryo E16.5

description: Ascl1 knockout embryo analyzed at embryonic day E16.5
DOI: 10.5061/dryad.hp26sv7/1
title: ESM SupportingData Parasites

description: Bloodborne parasite loads, assessed by microscopic analysis of thin-film blood smears, of white-throated sparrows. Initial PL = parasite load upon capture (per 10 000 cells examined). Day 14 PL = parasite load two weeks after inoculation (per 10 000 cells examined).
DOI: 10.5061/dryad.hp758sn/1
title: All phenotypic measurements for Helgeland house sparrows

description: File containing all phenotypic measurements for Helgeland individuals used in main analysis (metapopulation location 66°30’N, 12°30’E). Measurements were taken from all adult birds recorded between 1998-2013. id is individual id as determined by ring number. Sex is the genetic sex. Hatch island is the island the bird was first recorded on. Hatch year is the first year recorded if a bird was measured as a nestling, or the year prior to first year recorded if first measured as an adult. Year and month refer to the date the phenotypic measurement was taken. Age is the age of the bird when the measurement was taken. Island is the same as hatch island if hatch island is one of the 8 SNP-typed islands, else the island is that on which the blood sample for SNP typing was taken.