cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.jkhnyq
title: Occurrence Download

description: A dataset containing 233 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pelophylax bedriagae (Camerano, 1882)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018"
 ]
}

 The dataset includes 233 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036442-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.20350/digitalcsic/16360
title: Marine Heatwaves in a Changing Southern Ocean: Heat Budget Analysis in Modular Ocean Model v4p1 (ESM2M GFDL) and Causal Inference through Convergent Cross Mapping

description: [Description of methods used for collection/generation of data] For the heat budget analysis, we utilized temperature tendency terms available in the Modular Ocean Model version 4p1 (MOM4p1). Heat flux anomalies (in W m-2) for each term were averaged over a time step at a given ocean grid cell, following Griffies et al. (2015). Subsequently, we calculated anomalies for each heat term relative to their seasonal cycles. These anoalies were then averaged separately over the days corresponding to the onset phase (i.e., heat build-up) and the decay phase (i.e., heat dissipation) of the marine heatwaves (MHWs). To study causal interactions between the physical variables (Max. SSTA, SIC, and MLD) and net primary production (NPP) rates, we applied Dynamic Empirical Modelling (EDM). Specifically, we utilised the Convergent Cross Mapping (CCM) method, as defined by Sugihara et al. (2012). Following a sensitivity test, we adjusted the time delays (τ) and embedding dimension (E) to 3 and 6, respectively.
description: File List: MOM4p1; CCM.
DOI: 10.20350/digitalcsic/16358
title: Las Madres lake study (supplementary material)

description: This file compiles supplementary materials of the book on the long-term limnology of Las Madres lake (Spain) for 1991-2021.
DOI: 10.20350/digitalcsic/16357
title: Methodology of Las Madres lake study

description: This file describes meteorological and limnological methodologies used by the author to obtain data from Las Madres lake and its environment in 1991-2021.
DOI: 10.15468/dl.6tt3u9
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cophixalus crepitans Zweifel, 1985"
 ]
}

 The dataset includes 59 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036443-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.20350/digitalcsic/16200
title: Vegetation Indices for the Iberian Peninsula and Balearic Islands (VIIB) Database
title: Índices de Vegetación para la Península Ibérica y las Islas Baleares (VIIB)

description: [EN] It contains 4 files, one for each vegetation index—NDVI, kNDVI, SNDVI, and SkNDVI—in netcdf format. Multiple options exist for reading and manipulating netCDF files (.nc), with the most common including GIS applications like QGIS and ArcMap, specialized applications such as Panoply (https://www.giss.nasa.gov/tools/panoply/), and dedicated libraries such as ncdf4, raster, or terra in R, as well as netCDF4 or xarray in Python, among others. [ES] Contiene 4 ficheros, uno por cada índice de vegetación—NDVI, kNDVI, SNDVI y SkNDVI—, en formato netcdf. Existen multiples opciones para leer y manipular ficheros NetCDF (.nc), entre las más habituales encontramos aplicaciones de SIG como Qgis o ArcMap, aplicaciones específicas como Panoply (https://www.giss.nasa.gov/tools/panoply/), o mediante librerías específicas como ncdf4, raster o terra en R o netCDF4 o xarray en Python, entre otras.
description: [EN] The Vegetation Indices for the Iberian Peninsula and Balearic Islands (VIIB) Database offers comprehensive long-term time series of vegetation indices—NDVI, kNDVI, SNDVI, and SkNDVI—with a bi-weekly temporal resolution and a spatial resolution of 1.1 km, spanning from 1981 to the present day. Specially designed to encompass the Iberian Peninsula and Balearic Islands, this database facilitates the exploration of both historical and contemporary vegetation patterns and anomalies throughout the region over more than forty years. With bi-weekly updates, it provides a continuous and up-to-date resource for understanding vegetation changes and trends. The database integrates NDVI datasets— Sp_1km_NDVI, MYD13A2 and VNP13A2—derived from AVHRR, MODIS and VIIRS satellite sensors, respectively. These NDVI products have undergone a rigorous harmonization process, ensuring the temporal consistency of the time-series.
description: [ES] La Base de Datos de Índices de Vegetación para la Península Ibérica y las Islas Baleares (VIIB) proporciona series temporal extensas y detalladas de índices de vegetación—NDVI, kNDVI, SNDVI y SkNDVI— con una resolución temporal quincenal y una resolución espacial de 1.1 km, cubriendo el periodo desde 1981 hasta la actualidad. Específicamente diseñada para la Península Ibérica y las Islas Baleares, esta base de datos permite la exploración de patrones de vegetación tanto históricos como actuales, así como la detección y estudio de anomalías a lo largo de la región durante más de cuatro décadas. Con actualizaciones quincenales, proporciona un recurso continuo y actualizado para comprender los cambios y tendencias en la vegetación. La base de datos integra conjuntos de datos de NDVI—Sp_1km_NDVI, MYD13A2 y VNP13A2—derivados de los sensores satelitales AVHRR, MODIS y VIIRS, respectivamente. Estos productos NDVI han sido sometidos a un proceso de armonización riguroso, asegurando la consistencia temporal de las series temporales.
description: ndvi.nc kndvi.nc sndvi.nc skndvi.nc
DOI: 10.20350/digitalcsic/16352
title: Laser ablation of cell bonds between NCs of control and laminin-depleted egg chambers [Dataset]

description: Movies correspond to the ablation experiment shown in Fig 4. NCs membranes are visualized with Resille-GFP. A cell bond between 2 control NCs is ablated. Upon laser ablation, GFP fluorescent is lost in the middle of the ablated bond. The movie continues 10 s after the cut and shows displacement of the vertexes. Images are taken every 0.5 s. Scale bar, 10 μm.
DOI: 10.20350/digitalcsic/16351
title: Interrogating the CISS effect in chiral and paramagnetic organic radicals: the impact of the molecular spin over the total spin polarization [Dataset]

description: En este proyecto se ha trabajado para la investigación del efecto CISS en capas de radicales orgánicos. La dataset proporcionada permite poder graficar todos los espectros y otros gráficos que aparacen tanto en el manuscrito princiapl como en la información suplementaria.
DOI: 10.20350/digitalcsic/16350
title: In vivo BC migration in control and mirr&gt;abiRNAi chambers [Dataset]

description: BC migration in tslGFP; mirrGal4 and tslGFP; mirr&gt; AbiRNAi egg chambers, related to Fig 6. Scale bar, 20 μm.
DOI: 10.20350/digitalcsic/16349
title: Individual encounter histories from Scopolis shearwaters breeding in Pantaleu with wintering information

description: [Description of methods used for collection/generation of data] Individual capture hsitories were built from long-term individual capture-recapture data of adult Scopoli’s shearwater Calonectris diomedea breeding in Pantaleu islet. Some of these individuals were also equipped with geoloctaors, that when recovered may provide information of individual wintering areas. All the information about the deployment of geolocators devices and wintering areas visited are encoded in the individual capture histories.The file inlcudes 23 annual encounter occasions, which translate into 45 coded encounter occasions, with the ‘inter’ encounter occasions encoding information about presence in the colony and migration decisions, and the ‘intra’ occasions encoding information about whether a geolocator had been deployed or not at the end of the season.
description: No utilizar sin el previo consentimiento de los propietarios.
description: Este fichero contiene información de las historias de captura individuales de Pardela cenicienta criando en el islote de Pantaleu, Mallorca, durante el período 2000-2022. En estas historias de captura anuales se ha incluido información de la colocación de dispositivos geolocalizadores en algunos de estos individuos, y la información que se obtuvo de las zonas de invernada visitadas por estos individuos.
DOI: 10.20350/digitalcsic/16347
title: Key resources table [Dataset]

description: The basement membrane (BM) is a specialized extracellular matrix (ECM), which underlies or encases developing tissues. Mechanical properties of encasing BMs have been shown to profoundly influence the shaping of associated tissues. Here, we use the migration of the border cells (BCs) of the Drosophila egg chamber to unravel a new role of encasing BMs in cell migration. BCs move between a group of cells, the nurse cells (NCs), that are enclosed by a monolayer of follicle cells (FCs), which is, in turn, surrounded by a BM, the follicle BM. We show that increasing or reducing the stiffness of the follicle BM, by altering laminins or type IV collagen levels, conversely affects BC migration speed and alters migration mode and dynamics. Follicle BM stiffness also controls pairwise NC and FC cortical tension. We propose that constraints imposed by the follicle BM influence NC and FC cortical tension, which, in turn, regulate BC migration. Encasing BMs emerge as key players in the regulation of collective cell migration during morphogenesis.
DOI: 10.20350/digitalcsic/16344
title: Supplementary Table S3 from Targeting Aggressive B-cell Lymphomas through Pharmacological Activation of the Mitochondrial Protease OMA1 [Dataset]

description: DLBCL are aggressive, rapidly proliferating tumors that critically depend on the ATF4-mediated integrated stress response (ISR) to adapt to stress caused by uncontrolled growth, such as hypoxia, amino acid deprivation, and accumulation of misfolded proteins. Here, we show that ISR hyperactivation is a targetable liability in DLBCL. We describe a novel class of compounds represented by BTM-3528 and BTM-3566, which activate the ISR through the mitochondrial protease OMA1. Treatment of tumor cells with compound leads to OMA1-dependent cleavage of DELE1 and OPA1, mitochondrial fragmentation, activation of the eIF2α-kinase HRI, cell growth arrest, and apoptosis. Activation of OMA1 by BTM-3528 and BTM-3566 is mechanistically distinct from inhibitors of mitochondrial electron transport, as the compounds induce OMA1 activity in the absence of acute changes in respiration. We further identify the mitochondrial protein FAM210B as a negative regulator of BTM-3528 and BTM-3566 activity. Overexpression of FAM210B prevents both OMA1 activation and apoptosis. Notably, FAM210B expression is nearly absent in healthy germinal center B-lymphocytes and in derived B-cell malignancies, revealing a fundamental molecular vulnerability which is targeted by BTM compounds. Both compounds induce rapid apoptosis across diverse DLBCL lines derived from activated B-cell, germinal center B-cell, and MYC-rearranged lymphomas. Once-daily oral dosing of BTM-3566 resulted in complete regression of xenografted human DLBCL SU-DHL-10 cells and complete regression in 6 of 9 DLBCL patient-derived xenografts. BTM-3566 represents a first-of-its kind approach of selectively hyperactivating the mitochondrial ISR for treating DLBCL.
DOI: 10.20350/digitalcsic/16343
title: Effect of Connectivity on the Carrier Transport and Recombination Dynamics of Perovskite Quantum-Dot Networks [Dataset]

description: Quantum-dot (QD) solids are being widely exploited as a solution-processable technology to develop photovoltaic, light-emission, and photodetection devices. Charge transport in these materials is the result of a compromise between confinement at the individual QD level and electronic coupling among the different nanocrystals in the ensemble. While this is commonly achieved by ligand engineering in colloidal-based systems, ligand-free QD assemblies have recently emerged as an exciting alternative where nanostructures can be directly grown into porous matrices with optical quality as well as control over their connectivity and, hence, charge transport properties. In this context, we present a complete photophysical study comprising fluence- and temperature-dependent timeresolved spectroscopy to study carrier dynamics in ligand-free QD networks with gradually varying degrees of interconnectivity, which we achieve by changing the average distance between the QDs. Analysis of the photoluminescence and absorption properties of the QD assemblies, involving both static and timeresolved measurements, allows us to identify the weight of the different recombination mechanisms, both radiative and nonradiative, as a function of QD connectivity. We propose a picture where carrier diffusion, which is needed for any optoelectronic application and implies interparticle transport, gives rise to the exposure of carriers to a larger defect landscape than in the case of isolated QDs. The use of a broad range of fluences permits extracting valuable information for applications demanding either low- or high-carrier-injection levels and highlighting the relevance of a judicious design to balance recombination and diffusion.
description: (Folder &gt; File.txt) Figure 1 Figure_1c(norm. Abs).txt Figure_1d(PL).txt Figure_1e(PLQY).txt Figure 2 Figure_2a (TRPL_raw_bulk).txt Figure_2b (TRPL_raw_30per).txt Figure_2c (TRPL_raw_20per).txt Figure_2d (TRPL_raw_10per).txt Figure_2e (TRPL_raw_5per).txt Figure_2i (TRPL_photon_flux_bulk).txt Figure_2j (TRPL_photon_flux_30per).txt Figure_2k (TRPL_photon_flux_20per).txt Figure_2l (TRPL_photon_flux_10per).txt Figure_2m (TRPL_photon_flux_5per).txt Figure 3 Figure_3a (PLQY_bulk).txt Figure_3b (rel_PLQY_Tdep_30per).txt Figure_3c (rel_PLQY_Tdep_20per).txt Figure_3d (rel_PLQY_Tdep_10per).txt Figure_3e (rel_PLQY_Tdep_5per).txt Figure 4 Figure_4a (30per_norm_PL_80K).txt Figure_4b (5per_norm_PL_80K).txt Figure_4c (30per_TA_77K_N=15d5).csv Figure_4d (5per_TA_77K_N=11d1).csv Figure 5 Figure 5a (30per_GSB_decay).txt Figure 5b (5per_GSB_decay).txt Figure 5c (30per_GSB_decay_derivative).txt Figure 5d (5per_GSB_decay_biexciton_fit_all).txt
DOI: 10.20350/digitalcsic/16339
title: Los tweets de @DigitalCSIC en 2023

description: Los datos se extrajeron de Twitter Analytics al finalizar cada mes del 2023. Se descargaron los ficheros con los datos por meses en csv y se compilaron en un fichero Excel con 12 hojas.
description: Documento que contiene los tweets publicados por @DigitalCSIC en 2023.
DOI: 10.20350/digitalcsic/16337
title: DataSheet1_Riparian Zones—From Policy Neglected to Policy Integrated.pdf

description: Supplementary Material for Frontiers in Environmental Science 10: 868527 (2022)
description: 1. Riparian zones are vital areas of interaction between land and rivers and are often degraded by several pressures such as urbanisation, intensive agriculture and river engineering works. 2. This policy brief provides five key policy messages and recommendations to be considered by policy-makers, scientists, managers, and stakeholders to enhance riparian zone management. 3. Adopting an integrated socio-economic and environmentally dynamic view will ensure the sustainable management of riparian zones. 4. In light of climate change, it is critically important to conserve and/or restore the ecological integrity of riparian zones. 5. European Union Directives and national-scale legislation and regulations need updating to ensure coordinated implementation of riparian zone-related policies. 6. Stakeholder knowledge exchange, policy co-creation and adaptive management are key to enhancing riparian zone functions.
DOI: 10.20350/digitalcsic/16336
title: Electronic Supplementary Data A new hybrid iron fluoride bipyridine with mixed valence: Fe2F5(2,2′-bipyridine)2H2O
DOI: 10.20350/digitalcsic/16334
title: MOPREDAS_Annual_Books, v.1.0.0. [Dataset]
title: MOPREDAS Libros Anuales (1916-1950)

description: [ES] MOPREDAS_Annual_Books_1916-1950 se compone de los datos digitalizados de los Libros Resúmenes Anuales editados por los sucesivos Servicios Meteorológicos de España en el periodo 1916-1950; [EN] MOPREDAS_Annual_Books_1916-1950 is a compilation of monthly precipitation data digitalized from Annual Books 1916-1950.
description: [ES] Mopredas_Annual_Books_1916-1950 es el resultado de un proceso de digitalización de los datos publicados en los Libros Resúmenes Anuales editados por los servicios meteorológicos de España, periodo 1916-1950. Combinados con los datos incluidos en el BNDC han sido empleados para el desarrollo de las mallas de alta resolución denominadas MOPREDAS_1916-2015 y subsiguientes versiones
description: [EN from original) ] Mopredas_Annual_Books_1916-1950 is the result of a long digitalization procedure of Annual Books edited by Spanish Meteorological Services; the compilation includes hundreds of data not at present included in the Banco Nacional de Datos del Clima and increase the spatial and temporal density of precipitation records in pre-1950 period. Combined with BNDC after identification of digitalized data with BNDC observatories, it has been uses to develop the new high spatial density grid MOPREDAS_1916-2015 and versions
description: Three .csv files
DOI: 10.20350/digitalcsic/16328
title: Proteomic characterization of bacteriophage peptides from mastitis producer Staphylococcus aureus by LC-ESI-MS/MS and the bacteriophage phylogenomic analysis [Dataset]

description: 21 files
description: The present work describes LC-ESI-MS/MS analyses of tryptic digestion peptides from phages that infect Staphylococcus aureus-causing mastitis, and isolated from dairy products. A total of 1935 non-redundant peptides belonging to 1282 proteins were identified and analyzed. Among them, 80 staphylococcal peptides from phages were confirmed. These peptides belong to proteins such as phage repressors, structural phage proteins, uncharacterized phage proteins and complement inhibitors. Moreover, of the phage origin peptides found, eighteen of them were specific to S. aureus strains. These diagnostic peptides could be useful for the identification and characterization of S. aureus strains that cause mastitis. Furthermore, a study of bacteriophage phylogeny and the relationship among the identified phage peptides and the bacteria they infect was also performed. The results show the specific peptides which are present in closely related phages, and the existing links between bacteriophage phylogeny and the respective Staphylococcus spp. infected
description: Excel_dataset_in_Supplemental_Data.xlsx.-- README.txt.-- SA_41_mcarrera_O1205_343.RAW.-- SA_92_mcarrera_O1205_192.RAW.-- SA_280_mcarrera_O1205_190.RAW.-- SA_286_mcarrera_O1205_188.RAW.-- SA_507_mcarrera_O1205_345.RAW.-- SA_587_mcarrera_O1205_184.RAW.-- SA_617_mcarrera_O1205_335.RAW.-- SA_640_mcarrera_O1205_337.RAW.-- SA_700_mcarrera_O1205_182.RAW.-- SA_844_mcarrera_O1205_196.RAW.-- SA_894_mcarrera_O1205_347.RAW.-- SA_ATCC9144_mcarrera_O1205_200.RAW.-- SA_ATCC29213_mcarrera_O1205_333.RAW.-- SA_ATCC35845_mcarrera_O1205_194.RAW.-- SA_CA19_mcarrera_O1205_341.RAW.-- SA_GP2_mcarrera_O1205_349.RAW.-- SA_GP17_mcarrera_O1205_351.RAW.-- SA_OV18_mcarrera_O1205_339.RAW.-- SA_PE1_mcarrera_O1205_198.RAW.-- SA_U17_mcarrera_O1205_186.RAW
DOI: 10.20350/digitalcsic/16327
title: Dataset: Blood DNA methylation of 1 month-old Assaf ewe lambs being supplied methionine during the early life
DOI: 10.20350/digitalcsic/16321
title: Supplementary Figures. Ensifer meliloti denitrification is involved in infection effectiveness and N2O emissions by alfalfa root nodules

description: Supplementary Figures.
description: Fig. S1 Workflow for the plant experiments in this study. Red color indicates non-flooding conditions; blue color represents flooding conditions. nap+, nap overexpressing strain; nap−, nap mutant strain; nosZ −, nosZ mutant strain; NH, nodule harvest; PDC, physiological data collection.
description: Fig. S2 Nodulation kinetics of alfalfa plants inoculated with strain 4004 of E. meliloti grown without nitrate (0 mM, ●) or with 1 mM (■), 2 mM (▲), 3 mM (♦) or 4 mM (─) KNO3 during 30 days. Data represent means with standard error bars separated using a Tukey HSD test at p ≤ 0.05 from three independent experiments assayed by using ten plant replicates.
description: Fig. S3 Experimental set of alfalfa plants grown under different Cu conditions without nitrate for 43 days. Note the lighter green color of leaves from the plants grown without Cu added (0 μM) comparing to the rest of treatments.
DOI: 10.20350/digitalcsic/16320
title: Long-term meteorological and limnological data of Las Madres lake (Madrid, Spain)

description: [Description of methods used for collection/generation of data] Meteorological and limnological methodologies.
DOI: 10.20350/digitalcsic/16304
title: García-del Río et. al 2024_host preference MolEcol

description: Dataset of the scientific article "Nestling sex and behaviour determine the host preference of insect vectors in avian nests".
DOI: 10.15468/dl.ah98sc
title: Occurrence Download

description: A dataset containing 820 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chamaeleo chamaeleon (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2013",
 "Year is less than or equal to 2018"
 ]
}

 The dataset includes 820 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036444-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.20350/digitalcsic/16277
title: SedDARE-IB: An open access repository of sediment data for Iberia and its continental margins

description: By following the FAIR (Findable, Accessible, Interoperable and Reusable) principles of data management and having regular updates, it brings endless research and teaching opportunities to the scientific, industrial and educational communities.
description: SedDARE-IB_Readme.txt; TA_Basement_IAM_Part1_WGS84.xyz; TA_Basement_IAM_Part2_WGS84.xyz; TA_Basement_ISE_Off_Portugal_WGS84.xyz; TA_Basement_Peniche_Basin_WGS84.xyz; Top_Basement_N_LusitaniaB_WGS84.xyz; TA_Basement_Lines_Off_Lisbon_WGS84.xyz; Top_Basement_Lines_Off_SPortugal_WGS84.xyz; Top_Basement_Alentejo_and_Algarve_WGS84.xyz; Top_Basement_Lower_Tagus_Basin_WGS84.xyz; Top_Paleozoic_Basement_Onshore_IB_Basins_ETRS89.xyz; Top_Basement_WestMed_Basins_WGS84.xyz ; TA_Base_Cenozoic_IAM_Part1_WGS84.xyz; TA_Base_Cenozoic_IAM_Part2_WGS84.xyz; TA_Base_Cenozoic_ISE_Off_Portugal_WGS84.xyz; TA_Base_Cenozoic_Peniche_WGS84.xyz; Base_Cenozoic_N_LusitaniaB_WGS84.xyz; TA_Base_Cenozoic_Lines_Off_Lisbon_WGS84.xyz; Base_Cenozoic_Lines_Off_SPortugal_WGS84.xyz; Base_Cenozoic_Alentejo_Algarve_basins_Part1_WGS84.xyz; Base_Cenozoic_Alentejo_Algarve_basins_Part2_WGS84.xyz; Base_Cenozoic_Lower_Tagus_Basin_WGS84.xyz; Base_Cenozoic_Ebro_Basin_ETRS89.xyz; Base_Cenozoic_Duero_Basin_ETRS89.xyz; Base_Cenozoic_Tajo_Basin_ETRS89.xyz; Base_Cenozoic_Guadalquivir_Basin_ETRS89.xyz; Base_Cenozoic_Mallorca_Island_ETRS89.xyz; Base_Cenozoic_Valencia_Trough_WGS84.xyz; Base_Cenozoic_Alboran_Basin_WGS84.xyz; Algarve_PaleogeneUnc_TopUpperK_cokriginig_WGS84.xyz
DOI: 10.20350/digitalcsic/16275
title: Differential TF activity in Ahcy loss of function experiments [Dataset]

description: Differential TF activity in Ahcy loss of function experiments.
DOI: 10.20350/digitalcsic/16274
title: Subcellular localisations of transsulphuration and glutathione synthesis genes [Dataset]

description: Subcellular localisations of transsulphuration and glutathione synthesis genes.