cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19316738.v1
title: Table_S3_all_chromosomes_windowed_correlations.csv from Recombination landscape dimorphism and sex chromosome evolution in the dioecious plant <i>Rumex hastatulus</i>

description: There is growing evidence from diverse taxa for sex differences in the genomic landscape of recombination, but the causes and consequences of these differences remain poorly understood. Strong recombination landscape dimorphism between the sexes could have important implications for the dynamics of sex chromosome evolution because low recombination in the heterogametic sex can favour the spread of sexually antagonistic alleles. Here, we present a sex-specific linkage map and revised genome assembly of <i>Rumex hastatulus</i> and provide the first evidence and characterization of sex differences in recombination landscape in a dioecious plant. We present data on significant sex differences in recombination, with regions of very low recombination in males covering over half of the genome. This pattern is evident on both sex chromosomes and autosomes, suggesting that pre-existing differences in recombination may have contributed to sex chromosome formation and divergence. Our analysis of segregation distortion suggests that haploid selection due to pollen competition occurs disproportionately in regions with low male recombination. We hypothesize that sex differences in the recombination landscape have contributed to the formation of a large heteromorphic pair of sex chromosomes in <i>R. hastatulus</i>, but more comparative analyses of recombination will be important to investigate this hypothesis further.This article is part of the theme issue ‘Sex determination, sex chromosome evolution, and the role of sexual differentiation in land plants’.
DOI: 10.6084/m9.figshare.19316732.v1
title: Table_S5_all_chromosomes_windowed_partial_correlations.csv from Recombination landscape dimorphism and sex chromosome evolution in the dioecious plant <i>Rumex hastatulus</i>

description: There is growing evidence from diverse taxa for sex differences in the genomic landscape of recombination, but the causes and consequences of these differences remain poorly understood. Strong recombination landscape dimorphism between the sexes could have important implications for the dynamics of sex chromosome evolution because low recombination in the heterogametic sex can favour the spread of sexually antagonistic alleles. Here, we present a sex-specific linkage map and revised genome assembly of <i>Rumex hastatulus</i> and provide the first evidence and characterization of sex differences in recombination landscape in a dioecious plant. We present data on significant sex differences in recombination, with regions of very low recombination in males covering over half of the genome. This pattern is evident on both sex chromosomes and autosomes, suggesting that pre-existing differences in recombination may have contributed to sex chromosome formation and divergence. Our analysis of segregation distortion suggests that haploid selection due to pollen competition occurs disproportionately in regions with low male recombination. We hypothesize that sex differences in the recombination landscape have contributed to the formation of a large heteromorphic pair of sex chromosomes in <i>R. hastatulus</i>, but more comparative analyses of recombination will be important to investigate this hypothesis further.This article is part of the theme issue ‘Sex determination, sex chromosome evolution, and the role of sexual differentiation in land plants’.
DOI: 10.6084/m9.figshare.19316735
title: Table_S1_Genome_wide_windowed_correlations.csv from Recombination landscape dimorphism and sex chromosome evolution in the dioecious plant <i>Rumex hastatulus</i>

description: There is growing evidence from diverse taxa for sex differences in the genomic landscape of recombination, but the causes and consequences of these differences remain poorly understood. Strong recombination landscape dimorphism between the sexes could have important implications for the dynamics of sex chromosome evolution because low recombination in the heterogametic sex can favour the spread of sexually antagonistic alleles. Here, we present a sex-specific linkage map and revised genome assembly of <i>Rumex hastatulus</i> and provide the first evidence and characterization of sex differences in recombination landscape in a dioecious plant. We present data on significant sex differences in recombination, with regions of very low recombination in males covering over half of the genome. This pattern is evident on both sex chromosomes and autosomes, suggesting that pre-existing differences in recombination may have contributed to sex chromosome formation and divergence. Our analysis of segregation distortion suggests that haploid selection due to pollen competition occurs disproportionately in regions with low male recombination. We hypothesize that sex differences in the recombination landscape have contributed to the formation of a large heteromorphic pair of sex chromosomes in <i>R. hastatulus</i>, but more comparative analyses of recombination will be important to investigate this hypothesis further.This article is part of the theme issue ‘Sex determination, sex chromosome evolution, and the role of sexual differentiation in land plants’.
DOI: 10.6084/m9.figshare.19316738
title: Table_S3_all_chromosomes_windowed_correlations.csv from Recombination landscape dimorphism and sex chromosome evolution in the dioecious plant <i>Rumex hastatulus</i>

description: There is growing evidence from diverse taxa for sex differences in the genomic landscape of recombination, but the causes and consequences of these differences remain poorly understood. Strong recombination landscape dimorphism between the sexes could have important implications for the dynamics of sex chromosome evolution because low recombination in the heterogametic sex can favour the spread of sexually antagonistic alleles. Here, we present a sex-specific linkage map and revised genome assembly of <i>Rumex hastatulus</i> and provide the first evidence and characterization of sex differences in recombination landscape in a dioecious plant. We present data on significant sex differences in recombination, with regions of very low recombination in males covering over half of the genome. This pattern is evident on both sex chromosomes and autosomes, suggesting that pre-existing differences in recombination may have contributed to sex chromosome formation and divergence. Our analysis of segregation distortion suggests that haploid selection due to pollen competition occurs disproportionately in regions with low male recombination. We hypothesize that sex differences in the recombination landscape have contributed to the formation of a large heteromorphic pair of sex chromosomes in <i>R. hastatulus</i>, but more comparative analyses of recombination will be important to investigate this hypothesis further.This article is part of the theme issue ‘Sex determination, sex chromosome evolution, and the role of sexual differentiation in land plants’.
DOI: 10.6084/m9.figshare.19316735.v1
title: Table_S1_Genome_wide_windowed_correlations.csv from Recombination landscape dimorphism and sex chromosome evolution in the dioecious plant <i>Rumex hastatulus</i>

description: There is growing evidence from diverse taxa for sex differences in the genomic landscape of recombination, but the causes and consequences of these differences remain poorly understood. Strong recombination landscape dimorphism between the sexes could have important implications for the dynamics of sex chromosome evolution because low recombination in the heterogametic sex can favour the spread of sexually antagonistic alleles. Here, we present a sex-specific linkage map and revised genome assembly of <i>Rumex hastatulus</i> and provide the first evidence and characterization of sex differences in recombination landscape in a dioecious plant. We present data on significant sex differences in recombination, with regions of very low recombination in males covering over half of the genome. This pattern is evident on both sex chromosomes and autosomes, suggesting that pre-existing differences in recombination may have contributed to sex chromosome formation and divergence. Our analysis of segregation distortion suggests that haploid selection due to pollen competition occurs disproportionately in regions with low male recombination. We hypothesize that sex differences in the recombination landscape have contributed to the formation of a large heteromorphic pair of sex chromosomes in <i>R. hastatulus</i>, but more comparative analyses of recombination will be important to investigate this hypothesis further.This article is part of the theme issue ‘Sex determination, sex chromosome evolution, and the role of sexual differentiation in land plants’.
DOI: 10.5281/zenodo.6327650
title: Basic tools for deriving photolysis endpoints for soil photo-transformation products in groundwater

description: This spreadsheet has been designed to determine input parameters for consideration of the photolysis pathway in FOCUS-PELMO 5.5.3 and subsequent versions. It should be used alongside the EFSA scientific guidance on “Soil phototransformation products in groundwater – consideration, parameterisation and simulation in the exposure assessment of plant protection products”. The tools in the spreadsheet allow to identify the relevant grid points in the solar database 'AGRI4CAST', to retrieve irradiance values for the relevant grid points and for the period of the study from the 'AGRI4CAST' database via a spatial interpolation of the irradiance values (this can also be used for other solar databases besides 'AGRI4CAST'). Furthermore, the tools enable to convert the irradiance from kWh/m², kJ/m² or J/cm² into W/m², to perform a time-step normalisation for field studies, and to compare the normalised k<sub>fast</sub> values from different field studies.
description: EU; XLSX; pesticides.peerreview@efsa.europa.eu
DOI: 10.5281/zenodo.6327649
title: Basic tools for deriving photolysis endpoints for soil photo-transformation products in groundwater

description: This spreadsheet has been designed to determine input parameters for consideration of the photolysis pathway in FOCUS-PELMO 5.5.3 and subsequent versions. It should be used alongside the EFSA scientific guidance on “Soil phototransformation products in groundwater – consideration, parameterisation and simulation in the exposure assessment of plant protection products”. The tools in the spreadsheet allow to identify the relevant grid points in the solar database 'AGRI4CAST', to retrieve irradiance values for the relevant grid points and for the period of the study from the 'AGRI4CAST' database via a spatial interpolation of the irradiance values (this can also be used for other solar databases besides 'AGRI4CAST'). Furthermore, the tools enable to convert the irradiance from kWh/m², kJ/m² or J/cm² into W/m², to perform a time-step normalisation for field studies, and to compare the normalised k<sub>fast</sub> values from different field studies.
description: EU; XLSX; pesticides.peerreview@efsa.europa.eu
DOI: 10.6084/m9.figshare.19316777
title: M-file used for individual based simulations from Evolution of warfare by resource raiding favours polymorphism in belligerence and bravery

description: From protists to primates, intergroup aggression and warfare over resources have been observed in several taxa whose populations typically consist of groups connected by limited genetic mixing. Here, we model the coevolution between four traits relevant to this setting: (i) investment into common-pool resource production within groups (helping); (ii) proclivity to raid other groups to appropriate their resources (belligerence); and investments into (iii) defense and (iv) offense of group contests (defensive and offensive bravery). We show that when traits coevolve, the population often experiences disruptive selection favouring two morphs: ‘Hawks’, who express high levels of both belligerence and offensive bravery; and ‘Doves’, who express neither. This social polymorphism involves further among-traits associations when the fitness costs of helping and bravery interact. In particular, if helping is antagonistic with both forms of bravery, coevolution leads to the coexistence of individuals that either: (i) do not participate into common-pool resource production but only in its defense and appropriation (Scrounger Hawks); or (ii) only invest into common pool resource production (Producer Doves). Provided groups are not randomly mixed, these findings are robust to several modelling assumptions. This suggests that inter-group aggression is a potent mechanism in favouring within-group social diversity and behavioural syndromes.This article is part of the theme issue ‘Intergroup conflict: origins, dynamics and consequences across taxa’.
DOI: 10.6084/m9.figshare.19316777.v1
title: M-file used for individual based simulations from Evolution of warfare by resource raiding favours polymorphism in belligerence and bravery

description: From protists to primates, intergroup aggression and warfare over resources have been observed in several taxa whose populations typically consist of groups connected by limited genetic mixing. Here, we model the coevolution between four traits relevant to this setting: (i) investment into common-pool resource production within groups (helping); (ii) proclivity to raid other groups to appropriate their resources (belligerence); and investments into (iii) defense and (iv) offense of group contests (defensive and offensive bravery). We show that when traits coevolve, the population often experiences disruptive selection favouring two morphs: ‘Hawks’, who express high levels of both belligerence and offensive bravery; and ‘Doves’, who express neither. This social polymorphism involves further among-traits associations when the fitness costs of helping and bravery interact. In particular, if helping is antagonistic with both forms of bravery, coevolution leads to the coexistence of individuals that either: (i) do not participate into common-pool resource production but only in its defense and appropriation (Scrounger Hawks); or (ii) only invest into common pool resource production (Producer Doves). Provided groups are not randomly mixed, these findings are robust to several modelling assumptions. This suggests that inter-group aggression is a potent mechanism in favouring within-group social diversity and behavioural syndromes.This article is part of the theme issue ‘Intergroup conflict: origins, dynamics and consequences across taxa’.
DOI: 10.6084/m9.figshare.19316780
title: Mathematica Notebook containing derivations of results presented in ESM S3 and S5 from Evolution of warfare by resource raiding favours polymorphism in belligerence and bravery

description: From protists to primates, intergroup aggression and warfare over resources have been observed in several taxa whose populations typically consist of groups connected by limited genetic mixing. Here, we model the coevolution between four traits relevant to this setting: (i) investment into common-pool resource production within groups (helping); (ii) proclivity to raid other groups to appropriate their resources (belligerence); and investments into (iii) defense and (iv) offense of group contests (defensive and offensive bravery). We show that when traits coevolve, the population often experiences disruptive selection favouring two morphs: ‘Hawks’, who express high levels of both belligerence and offensive bravery; and ‘Doves’, who express neither. This social polymorphism involves further among-traits associations when the fitness costs of helping and bravery interact. In particular, if helping is antagonistic with both forms of bravery, coevolution leads to the coexistence of individuals that either: (i) do not participate into common-pool resource production but only in its defense and appropriation (Scrounger Hawks); or (ii) only invest into common pool resource production (Producer Doves). Provided groups are not randomly mixed, these findings are robust to several modelling assumptions. This suggests that inter-group aggression is a potent mechanism in favouring within-group social diversity and behavioural syndromes.This article is part of the theme issue ‘Intergroup conflict: origins, dynamics and consequences across taxa’.
DOI: 10.6084/m9.figshare.19316780.v1
title: Mathematica Notebook containing derivations of results presented in ESM S3 and S5 from Evolution of warfare by resource raiding favours polymorphism in belligerence and bravery

description: From protists to primates, intergroup aggression and warfare over resources have been observed in several taxa whose populations typically consist of groups connected by limited genetic mixing. Here, we model the coevolution between four traits relevant to this setting: (i) investment into common-pool resource production within groups (helping); (ii) proclivity to raid other groups to appropriate their resources (belligerence); and investments into (iii) defense and (iv) offense of group contests (defensive and offensive bravery). We show that when traits coevolve, the population often experiences disruptive selection favouring two morphs: ‘Hawks’, who express high levels of both belligerence and offensive bravery; and ‘Doves’, who express neither. This social polymorphism involves further among-traits associations when the fitness costs of helping and bravery interact. In particular, if helping is antagonistic with both forms of bravery, coevolution leads to the coexistence of individuals that either: (i) do not participate into common-pool resource production but only in its defense and appropriation (Scrounger Hawks); or (ii) only invest into common pool resource production (Producer Doves). Provided groups are not randomly mixed, these findings are robust to several modelling assumptions. This suggests that inter-group aggression is a potent mechanism in favouring within-group social diversity and behavioural syndromes.This article is part of the theme issue ‘Intergroup conflict: origins, dynamics and consequences across taxa’.
DOI: 10.5445/ir/1000143425
title: Daten zu den Abbildungen 4 und 5
DOI: 10.11588/data/1l11sq
title: Improving change analysis from near-continuous 3D time series by considering full temporal information [Data and Source Code]

description: This dataset comprises the source code (Python scripts) and data to perform spatiotemporal segmentation in time series of surface change data for a (i) synthetic dataset and (ii) hourly snow cover changes acquired by terrestrial laser scanning. Further details are given in the corresponding paper: Extracting accumulation and erosion from near-continuous 3D observation of a natural scene is an important step in many geoscientific analyses. We examine how spatiotemporal segmentation improves the extraction of change volumes from near-continuous 3D time series by using the full temporal information of surface changes. Synthetic changes and manually derived reference changes from an hourly terrestrial laser scanning time series of snow cover monitoring are detected in the temporal domain and delineated accurately (area intersection over union of 0.86 for snow cover changes). The accuracy of change volumes (mean of -25 %; std. dev. of 20 % deviation to the reference) can be improved in the future by refining the detected start and end times in the fully automatic approach. The established pairwise methods only achieve high quantification accuracies if area and timespans of changes are known a-priori. Incorporating the surface change history in change extraction is thereby shown to be essential for change analysis of near-continuous 3D time series as acquired in geographic monitoring settings.
DOI: 10.6084/m9.figshare.19316789
title: Data File from Turkana warriors’ call to arms: how an egalitarian society mobilizes for cattle raids

description: Raw data used to create Figures 1-6
DOI: 10.6084/m9.figshare.19316789.v1
title: Data File from Turkana warriors’ call to arms: how an egalitarian society mobilizes for cattle raids

description: Raw data used to create Figures 1-6
DOI: 10.5281/zenodo.6334438
title: ID market related datasets for HLU9 of the CROSSBOW project

description: Datasets for HLU9 of the CROSSBOW project organised by countries individually. What is included in the dataset? <strong>Cross-Zonal Capacities</strong> - unformatted dataset published as received from the TSOs CZC data for the years 2018 & 2019 were gathered in HLU9. The CZC values were for the timeframe before the ID market took place. Parameters included: Date & Time, CZC value to and from the delivering LFC area. CZC data was collected for borders of TSOs from the CROSSBOW project consortium<strong>.</strong> <strong>ID market data - </strong>unformatted dataset published as received from the TSOs ID related data for the years 2018 & 2019 were gathered in HLU9. The parameters that were included in the data were: Date & Time, Volume Weighted Average Price, Traded volume, Location… ID market related data was collected for countries of CROSSBOW TSOs, where such data was available.
DOI: 10.5281/zenodo.6334437
title: ID market related datasets for HLU9 of the CROSSBOW project

description: Datasets for HLU9 of the CROSSBOW project organised by countries individually. What is included in the dataset? <strong>Cross-Zonal Capacities</strong> - unformatted dataset published as received from the TSOs CZC data for the years 2018 & 2019 were gathered in HLU9. The CZC values were for the timeframe before the ID market took place. Parameters included: Date & Time, CZC value to and from the delivering LFC area. CZC data was collected for borders of TSOs from the CROSSBOW project consortium<strong>.</strong> <strong>ID market data - </strong>unformatted dataset published as received from the TSOs ID related data for the years 2018 & 2019 were gathered in HLU9. The parameters that were included in the data were: Date & Time, Volume Weighted Average Price, Traded volume, Location… ID market related data was collected for countries of CROSSBOW TSOs, where such data was available.
DOI: 10.34740/kaggle/dsv/3265708
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.17638/datacat.liverpool.ac.uk/1639
title: Diversity of Escherichia coli isolates from milk obtained along the Nairobi dairy value chain by DNA fingerprint analysis
DOI: 10.18112/openneuro.ds004056.v1.0.0
title: GDMotor
DOI: 10.6084/m9.figshare.19316717.v1
title: Questionário aplicado

description: https://forms.gle/TECsYW87KkXCkg8n6<br>
DOI: 10.34740/kaggle/dsv/3265735
title: 2021 World Population (updated daily)
DOI: 10.5517/ccdc.csd.cc280wls
title: CCDC 2086225: Experimental Crystal Structure Determination

description: Related Article: Brian Koronkiewicz, Elvira R. Sayfutyarova, Scott C. Coste, Brandon Q. Mercado, Sharon Hammes-Schiffer, James M. Mayer|2022|J.Org.Chem.|87|2997|doi:10.1021/acs.joc.1c02834
DOI: 10.5517/ccdc.csd.cc280wmt
title: CCDC 2086226: Experimental Crystal Structure Determination

description: Related Article: Brian Koronkiewicz, Elvira R. Sayfutyarova, Scott C. Coste, Brandon Q. Mercado, Sharon Hammes-Schiffer, James M. Mayer|2022|J.Org.Chem.|87|2997|doi:10.1021/acs.joc.1c02834
DOI: 10.5517/ccdc.csd.cc28fgbj
title: CCDC 2098307: Experimental Crystal Structure Determination

description: Related Article: Xiaofeng Zhang, Miao Liu, Desheng Zhan, Manpreet Kaur, Jerry P. Jasinski, Wei Zhang|2022|New J.Chem.|46|3866|doi:10.1039/D1NJ05538K
DOI: 10.5517/ccdc.csd.cc28hcz4
title: CCDC 2100156: Experimental Crystal Structure Determination

description: Related Article: Bhanwar Kumar Malviya, Amanpreet Kaur Jassal, Manvika Karnatak, Ved Prakash Verma, Siddharth Sharma|2022|J.Org.Chem.|87|2898|doi:10.1021/acs.joc.1c02773
DOI: 10.5517/ccdc.csd.cc28hd06
title: CCDC 2100157: Experimental Crystal Structure Determination

description: Related Article: Bhanwar Kumar Malviya, Amanpreet Kaur Jassal, Manvika Karnatak, Ved Prakash Verma, Siddharth Sharma|2022|J.Org.Chem.|87|2898|doi:10.1021/acs.joc.1c02773