cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15146/r3qx24
title: Predicted percentage dissatisfied with ankle draft

description: We collected subjective responses on thermal comfort from 110 college
 students when their lower legs and ankles were exposed to air at different
 environment conditions (e.g., air speed and temperature). A draft risk
 model was developed based on the laboratory results. One can find more
 description in our original papers. S. Liu, S. Schiavon, A. Kabanshi, W.W.
 Nazaroff, Predicted percentage dissatisfied with ankle draft, Indoor Air.
 27 (2017) 852–862. S. Schiavon, D. Rim, W. Pasut, W.W. Nazaroff, Sensation
 of draft at uncovered ankles for women exposed to displacement ventilation
 and underfloor air distribution systems, Build. Environ. 96 (2016)
 228–236.
DOI: 10.5061/dryad.5hp6pm8
title: Data from: Space and rank: infants expect agents in higher position to be socially dominant

description: Social hierarchies exist throughout the animal kingdom, including among
 humans. Our daily interactions inevitably reflect social dominance
 relationships between individuals. How do we mentally represent such
 concepts? Studies show that social dominance is represented as vertical
 space (i.e., high=dominant) by adults and preschool children, suggesting a
 space-dominance representational link in social cognition. However, little
 is known about its early development. Here, we present experimental
 evidence that 12- to 16-month-old infants expect agents presented in a
 higher spatial position to be more socially dominant than agents in a
 lower spatial position. After infants repeatedly watched the higher and
 lower agents being presented simultaneously, they looked longer at the
 screen when the lower agent subsequently outcompeted the higher agent in
 securing a reward object, suggesting that this outcome violated their
 higher-is-dominant expectation. We first manipulated agents’ positions by
 presenting them on a podium (Experiment 1). Then we presented the agents
 on a double-decker stand to make their spatial positions directly above or
 below each other (Experiment 2), and we replicated the results (Experiment
 3). This research demonstrates that infants expect spatially
 higher-positioned agents to be socially dominant, suggesting deep roots of
 the space-dominance link in ontogeny.
description: Meng et
 al_Dataset Data from: Space and
 rank: Infants expect agents in higher position to be socially
 dominant
DOI: 10.6078/d1kt16
title: Muntiacus muntjak and Muntiacus reevesi supporting files

description: Available Files: Mmuntjak.cds.fasta.gz - Nucleotide sequences of
 the coding regions from M. muntjak gene annotations. Mmuntjak.gff.gz
 - Gene annotations for M. muntjak from Gene Model Mapper
 (v1.5.3). Mmuntjak.pep.fasta.gz - Peptide sequences of the coding
 regions from M. muntjak gene annotations. Mmuntjak.repeat_lib.fasta.gz -
 De novo repeats from RepeatModeler (v1.0.11) for M.
 muntjak as well as ancestral Cetartiodactyla repeats from RepBase
 (downloaded November 8, 2018). Mreevesi.cds.fasta.gz - Nucleotide
 sequences of the coding regions from M. reevesi gene annotations.
 Mreevesi.gff.gz - Gene annotations for M. reevesi from
 Gene Model Mapper (v1.5.3). Mreevesi.pep.fasta.gz - Peptide
 sequences of the coding regions from M. reevesi gene annotations.
 Mreevesi.repeat_lib.fasta.gz - De novo repeats
 from RepeatModeler (v1.0.11) for M. reevesi as well
 as ancestral Cetartiodactyla repeats from RepBase (downloaded
 November 8, 2018). Muntjac.timetree.nexus - Nexus format phylogenetic tree
 derived from phylogenetic tree Muntjac.tree.newick. Divergence time
 confidence intervals from TimeTree were input into MEGA7 (v7.0.26), using
 the Reltime method and the GTR+Gamma model to create a time tree.
 Muntjac.tree.newick - Newick format phylogenetic tree based on fourfold
 degenerate sites and constructed with RAxML (v8.2.11) using the GTR+Gamma
 model of substitution with outgroup B. taurus.
DOI: 10.15146/r3509h
title: Environmental drivers of adult locomotion and reproduction in a symbiont-hosting sea anemone

description: This data was collected from the sea anemone species Exaiptasia diaphana
 collected in the Florida Keys in January 2016. Anemones were brought into
 the lab where they were exposed to feeding treatments (fed or starved) and
 algal symbiont manipulations (high or low symbiont denisties).
 We collected data on movement via time lapse photography,
 reproduction via counting of pedal lacerates, and anemone size via
 photography and analysis in the program ImageJ. We found that feeding
 treatments had an effect on movement, but symbiont density did not.
 However, there was an interaction between feeding and symbiont density
 that did have an effect on reproduction and anemone size. We suggest that
 food availbility affects adult movement in sea anemones and that
 movemnt may impact the ability of this nominally sessile organism
 to escape deleterious conditions.
description: See methods within the data set file
DOI: 10.7280/d18w95
title: Serum Endocannabinoid Levels in Patients With End-Stage Renal Disease

description: Context: Previous studies have shown that the endocannabinoid system plays
 a major role in energy metabolism through the actions of its main
 mediators, 2-arachidonoyl-sn-glycerol (2-AG) and anandamide (AEA).
 Objective: We examined serum levels of major endocannabinoid mediators and
 their association with clinical parameters in patients with end-stage
 renal disease (ESRD). Design and Setting: Serum concentrations of 2-AG and
 AEA were measured in patients on maintenance hemodialysis (MHD), and
 correlations with various clinical and laboratory indices were examined.
 For comparison of levels in patients undergoing MHD, 2-AG was also
 measured in age and sex-matched healthy subjects. Main Outcome Measure:
 Serum 2-AG. Results: Serum 2-AG levels were significantly elevated in
 patients with ESRD compared with healthy controls. Highest levels
 of 2-AG were found in patients on MHD, and similar findings were seen in a
 second set of subjects in independent analyses. Among 96 patients on MHD,
 2-AG levels correlated significantly and positively with serum
 triglycerides (ρ=0.43; P &lt;0.0001), body mass index (ρ=0.40; P
 &lt;0.0001), and body anthropometric measures and negatively with
 serum high-density lipoprotein cholesterol (ρ= -0.33; P =0.001) following
 adjustment for demographic and clinical variables. Conclusions: In
 patients on MHD, levels of serum 2-AG, a major endocannabinoid
 mediator, were increased. In addition, increasing serum 2-AG levels
 correlated with increased serum triglycerides and markers of body mass.
 Future studies will need to evaluate the potential mechanisms responsible
 for these findings.
DOI: 10.7272/q6xs5skd
title: Self-managed abortion in the literature: a systematic scoping review

description: Self-managed abortion, when a person performs their own abortion without
 clinical supervision, is a model of abortion care used across a range of
 settings. To provide a comprehensive synthesis of the available literature
 on self-managed abortion, we conducted a systematic search for
 peer-reviewed research in April 2019 in PubMed, Embase, Web of Science,
 Popline, PsycINFO, Google Scholar, Scielo, and Redalyc. We included
 studies that had a research question focused on self-managed abortion; and
 were published in English or Spanish. The combined search returned 7,167
 studies; after screening, 99 studies were included in the analysis.
 Included studies reported on methods, procurement, characteristics of
 those who self-managed, effectiveness, safety, reasons for self-managed
 abortion, and emotional and physical experiences. Numerous abortion
 methods were reported, most frequently abortion with pills and herbs.
 Eight out of nine studies reported an effectiveness of 70% or higher for
 self-managed medication abortion with misoprostol alone or in combination
 with mifepristone, at gestations ranging from &lt;7 to &gt;13
 weeks. We identify gaps in the research, and make recommendations to
 address those gaps.
description: Table 3: Sociodemographic and other characteristics reported in the literature about people who self-managed an abortion Table 4: Reasons reported in included studies for self-managing an abortion Table 5: Emotional experiences with self-managed abortion reported in included studies Appendix 1: Systematic review search strategy
DOI: 10.7280/d1q08v
title: Multistate hybrid time-dependent density functional theory with surface hopping accurately captures ultrafast thymine photodeactivation

description: Collected trajectories for paper "Multistate hybrid time-dependent
 density functional theory with surface hopping accurately captures
 ultrafast thymine photodeactivation".
description: Trajectories were simulated using Fewest Switches Surface Hopping
 (FSSH) combined with time-dependent density functional theory (TDDFT) as
 described in (to be submitted) paper.
description: See README.md file
DOI: 10.5061/dryad.31nb080
title: Data from: Transcriptional profiling of the murine airway response to acute ozone exposure

description: Ambient ozone (O3) exposure has serious consequences on respiratory
 health, including airway inflammation and injury. Decades of research have
 yielded thorough descriptions of these outcomes; however, less is known
 about the molecular processes that drive them. The aim of this study was
 to further describe the cellular and molecular responses to O3 exposure in
 murine airways, with a particular focus on transcriptional responses in
 two critical compartments: conducting airways (CA) and airway macrophages
 (AM). After exposing adult, female C57BL/6J mice to filtered air, 1 or 2
 ppm O3, we assessed hallmark responses including airway inflammation (cell
 counts and cytokine secretion) and injury (epithelial permeability),
 followed by gene expression profiling of CA and AM by RNA-seq. As
 expected, we observed concentration-dependent increases in airway
 inflammation and injury. CA and AM both exhibited changes in gene
 expression to both 1 and 2 ppm O3 that were largely compartment-specific.
 In CA, genes associated with epithelial barrier function, detoxification
 processes, and cellular proliferation were altered, while O3 affected
 genes involved in innate immune signaling, cytokine production, and
 extracellular matrix remodeling in AM. Further, CA and AM also exhibited
 notable differences in concentration-response expression patterns for
 large numbers of genes. Overall, our study has described transcriptional
 responses to acute O3 exposure, revealing both shared and unique gene
 expression patterns across multiple concentrations of O3 and in two
 important O3-responsive tissues. These profiles provide broad mechanistic
 insight into pulmonary O3 toxicity, and reveal a variety of targets for
 focused follow-up studies.
description: Phenotyping
 dataraw
 phenotyping data.csvOrdered-factor model
 analysis and dataOrdered-factor model
 analysis including input data files and codeOrdered factor model analysis
 and data.zipR files for
 figures/analysisR files for generating
 manuscript figures and gene expression analysesManuscript figures and gene
 expression analysis.zipSupplementary
 DataSupplementary data files
 including all output from DESeq2 gene expression analysis and
 GSVASupplementary
 TablesSupplementary tables
 referenced in the textSupplementary Figure
 1Supplementary figure 1
 referenced in the text (CA marker genes)supp
 fig1.tifSupplementary Figure
 2Supplementary figure 2
 referenced in the text (AM polarization genes)supp
 fig2.tifManuscript figures and
 gene expression analysisR code files to generate
 figures and gene expression analyses
DOI: 10.13020/h8tx-mb47
title: Paleolimnology information on Bythotrephes exoskeleton fossil remains in dated sediment cores from Lake Kabetogama and Lake Mille Lacs, Minnesota

description: These are paleolimnology Excel data files for eight sediment cores. Four of the sediment cores were collected from Lake Kabetogama (Minnesota) and four of them were collected from Lake Mille Lacs (Minnesota) during lake ice-covered periods in 2017 and 2018. There are three types of Excel data files for each of the eight sediment cores including: 1) Lead 210 age estimates for sediment core horizons, 2) Loss on ignition estimates for sediment core horizons, and 3) Fossil recovery information for Bythotrephes exoskeletal remains (mandibles, caudal spines, and resting eggs) for sediment core horizons. These data were used as part of a study to identify dates of first presence and early growth of the invasive species Bythotrephes in two Minnesota lakes.
description: See abstract
DOI: 10.5061/dryad.k2k61p5
title: Data from: Mullennix et al. 2019 study

description: The goal of the present study was to examine whether the Kuleshov Effect
 from film could be produced using isolated photographic images, instead of
 the typical dynamic film sequences used to demonstrate the effect.
 Two-photograph sequences consisting of a context photograph varying in
 pleasantness and a photograph of an actor’s neutral face were presented.
 Participants performed a liking rating task for the context photograph (to
 ensure attention to the stimulus) and they performed three tasks for the
 face stimulus: labeling the emotion portrayed by the actor, rating
 valence, and rating arousal. The results of the labeling data confirmed
 the existence of a Kuleshov-type effect, with more faces labeled as
 “happy” after viewing pleasant context and more faces labeled “sad” or
 “fearful” after viewing unpleasant context. The results for rating valence
 and arousal were mixed. Overall, the results suggest that isolated
 photograph sequences produce a Kuleshov-type context effect on
 attributions of emotion to actors’ faces, replicating previous research
 conducted with dynamic film sequences.
description: Data set for Mullennix
 et al. 2019 studyAll response data and
 reaction time data for associated study.
DOI: 10.6078/d1997t
title: Remote sensing spectral vegetation indices for 2011 NWCA wetland sites

description: This dataset represents the values of Landsat-based spectral vegetation
 indices estimated for 1138 wetland sites included in the National Wetland
 Condition Assessment (NWCA) by the U.S. Environmental Protection Agency,
 represented by circular buffers with 40-m radius as described in
 Taddeo et al., Ecological Applications, In Press. Each spectral index is
 summarized as a mean and standard deviation of its 2011 maximum values for
 the Landsat pixels falling within the site boundaries. The
 dataset contains two spreadsheets: the "Data" providing spectral
 index values for each NWCA site as estimated in this study, and the
 "Metadata" one which spells the index abbreviations and provides
 names and links to other variables used in the study which are publicly
 available via NWCA online database.
DOI: 10.7280/d1dh3b
title: Figures for "California forest die-off linked to multi-year deep soil drying in 2012-2015 drought"

description: Data underlying main figures in "California forest die-off linked to
 multi-year deep soil drying in 2012-2015 drought", published in
 Nature-Geoscience, July 2019, ML Goulden and RC Bales.  Abstract
 of paper: Widespread episodes of recent forest die-off have been tied to
 the occurrence of anomalously warm droughts, though the underlying
 mechanisms remain inadequately understood. California’s 2012-2015 drought,
 with exceptionally low precipitation and warmth and widespread conifer
 death, provides an opportunity to explore the chain of events leading to
 forest die-off. Here we present the spatial and temporal patterns of
 die-off and moisture deficit during California’s drought based on field
 and remote-sensing observations.  We found that die-off was
 closely tied to multi-year deep-rooting-zone drying, and that this
 relationship provides a framework to diagnose and predict mortality.
 Marked tree death in an intensively studied Sierra Nevada forest followed
 a four-year moisture overdraft, with cumulative 2012-2015
 evapotranspiration exceeding precipitation by ~1500 mm and subsurface
 moisture exhaustion to 5-15 m depth. Observations across the entire Sierra
 Nevada further linked tree death to deep drying, with die-off and moisture
 overdraft covarying across latitude and elevation. Unusually dense
 vegetation and warm temperatures accelerated southern Sierran
 evapotranspiration in 2012-2015, intensifying overdraft and compounding
 die-off by an estimated 55%. Climate change is expected to further amplify
 evapotranspiration and moisture overdraft during drought, potentially
 increasing Sierran tree death during drought by ~15 to 20% per oC.
description: See Methods section of paper and figure captions for
 details.
description: The datasets posted here provide the values underlying the
 paper's figures.  File "Goulden and Bales
 2019 NDMI masked (Fig S1e).tif" is a geotiff in lat-long WGS84 of the
 late dry-season Delta Normalized Difference Moisture Index (Delta NDMI;
 2009-11 NDMI minus 2016; units are dimensionless NDMI, which ranges from
 -1 to 1).  The figure was used to generate Fig S1e in the paper's
 supplement and was used for subsequent analyses.  The data set was masked
 with -999 as described in the Fig S1e caption of the paper's
 supplement. File "Goulden and Bales 2019 P-ET (Fig
 S1c).tif" is a geotiff in lat-long WGS84 of the cumulative 4-year
 moisture overdraft (P-ET; 2012-15 sums; units are mm).  The figure was
 used to generate Fig S1c in the paper's supplement and was used for
 subsequent analyses.  The data set was masked to exclude water
 bodies. File "Goulden and Bales Figures.xlsx"
 is an MS Excel 2010 file that includes the datasets used to generate all
 of the main figures in the paper.  The data for each figure is shown in a
 separate tab identified by the figure number.   The units and column
 headers are consistent with those used in the figures, except for a few
 cases where some of the vegetation indices were multiplied by 10000.
DOI: 10.6078/d10x1z
title: Direct mapping of curve-crossing dynamics in IBr by attosecond transient absorption spectroscopy

description: Herein is the experimental data set for the publication titled
 "Direct mapping of curve-crossing dynamics in IBr by attosecond
 transient absorption spectroscopy." The abstract of the paper is as
 follows: The electronic character of photoexcited molecules can abruptly
 change at avoided crossings and conical intersections. Here, we report
 direct mapping of the coupled interplay between electrons and nuclei in a
 prototype molecule, iodine monobromide (IBr), using attosecond transient
 absorption spectroscopy. A few-femtosecond visible pulse resonantly
 excites the B(3Π0+), Y(0+), and Z(0+) states of IBr, and the
 photodissociation dynamics are tracked by an attosecond
 extreme-ultraviolet pulse that simultaneously probes the I-4d and Br-3d
 core-level absorption edges. Direct comparison with quantum mechanical
 simulations unambiguously identifies the core-level absorption features
 associated with adiabatic and diabatic channels at the B/Y avoided
 crossing and concurrent two-photon dissociation processes that involve the
 Y/Z avoided crossing. The results show clear evidence for rapid switching
 of valence-electronic character at the avoided crossing.
description: File #1 "pump_probe_spec.txt" This
 2D file contains the experimental results of the delay-dependent transient
 absorption measurements. The scales for the axes (delay time, photon
 energy) are provided in the other files. The values ΔOD
 are unitless. File #2 "delay.txt"
 This 1D file provides the delay time information. The units are
 femtosecond (fs). File #3
 "photon_energy.txt" This 1D file provides the
 calibration of the XUV spectrometer. The units are electronvolt
 (eV).
DOI: 10.7291/d1zh3m
title: Data for Drought-Net rainfall shelters did not cause non-drought effects on photosynthesis for California central coast plants.

description: Rainfall interception shelters are frequently used to study the ecological
 consequences of drought. One common shelter design employs V-shaped
 plastic troughs spaced on a supporting frame to intercept rainfall.
 Shading, reflection, and infrared radiation may alter the radiative
 environment under shelters in ways independent of their intended effect on
 soil moisture. We measured microclimate and several photosynthetic
 variables for watered potted plants under rain-out shelters and in
 open-air, unsheltered plots. We tested whether the shelter infrastructure
 altered aboveground micrometeorology and photosynthesis for watered,
 potted plants of native Californian species: Elymus
 glaucus, Eriogonum latifolium, Mimulus aurantiacus,
 and Morella californica. We quantified effects on photosynthesis
 in terms of light harvesting by Photosystem II (PSII) and leaf-level gas
 exchange on open-air and shelter plots, the quantum yield of PSII for
 darkened leaves, dark respiration, and nocturnal stomatal conductance. The
 rain-out shelter reduced daily integrated PAR by 20%. Air temperature,
 leaf temperature, and leaf-to-air VPD were not different under shelters
 compared to controls during the day. Likewise, there were no effects of
 shelters on net CO2 assimilation, stomatal conductance to water
 vapor (gs), internal leaf [CO2], or electron transport rate through PSII
 during the daytime. At night, Tair was 0.6°C higher under
 shelters, but there were no effects on dark respiration or stomatal
 conductance. Despite some differences in micrometeorology under rain-out
 shelters compared to open-air plots, there were little or no aboveground
 non-drought effects of the shelters on leaf-level photosynthesis for
 watered, potted plants of these California native plant species.
DOI: 10.7291/d1p07g
title: A sample of Saturn interior density profiles derived with MCMC and gravity-based likelihood.

description: We ran a Markov-Chain Monte Carlo algorithm to derive the posterior
 distribution of density profiles for Saturn, where the likelihood function
 was a chi-squared distributed distance of each curve's gravity
 coefficients from the values reported for that planet by the
 Cassini radio science team (Iess et al., 2019). The result is a large
 sample of interior profiles of Saturn consistent with observation and
 minimally constrained by model assumptions. This sample is archived here
 in sufficiently raw form to, (a) allow anyone to reproduce or
 invalidate our sampling method, and (b) allow additional analysis by
 interested researchers to make further inferences based on existing data,
 without the need to repeat the computationally difficult MCMC sampling
 procedure. A full description of the work behind this dataset can be found
 in arxiv https://arxiv.org/abs/1912.02137
DOI: 10.15146/tavf-rm36
title: Predicted percentage dissatisfied with vertical air temperature difference

description: We conducted laboratory tests with four nominal vertical air temperature
 differences, 0.4, 2.9, 5.9, and 8.4 °C, between the head (0.1 m) level and
 ankles (1.1 m) level. Ninety-eight college-age students participated in a
 blind within-subject experiment.