cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7867925
title: Soft-walled monothalamids (Rhizaria: foraminifera) of the Crimean shelf (Black Sea): taxonomic composition and inter-regional patterns of species diversity and distribution

description: We present new data on monothalamous (single-chambered) foraminifera from the Black Sea Crimean shelf zone between Karkinitsky Gulf in the west to the area near Kerch in the east. Within this region we recognized a total of 40 morphospecies; 8 are assigned, in some cases tentatively, to known species and another 9 to known genera, again sometimes tentatively. Twelve species (all undescribed) are reported here for the first time. The most abundant species are <i>Psammophaga</i> sp. (<i>sensu</i> Gooday et al. 2011), <i>Goodayia</i> <i>rostellata</i> Sergeeva & Anikeeva 2008 and <i>Vellaria pellucida</i> Gooday & Fernando 1992, each of which is evenly distributed in all studied areas. The highest species richness of monothalamous foraminifera was observed in the Yalta region. Based on a multivariate analysis of monothalamid assemblage structure and diversity indices [Shannon (H’), Margalef (D’), eveness Pielou (J’), Simpson (1-<b>λ’</b>) and rarefaction ES(n)], we recognized three groups of stations, corresponding to the Western, Southern and Eastern coasts of the Crimean peninsula. The monothalamid assemblages found in each of these coastal regions exhibit different structural features and are distinguished by certain characteristic species.
DOI: 10.6084/m9.figshare.7867937
title: Supplementary Material for: Impact of Obesity on the Metabolic Control of Type 2 Diabetes: Results of the Turkish Nationwide Survey of Glycemic and Other Metabolic Parameters of Patients with Diabetes Mellitus (TEMD Obesity Study)

description: <b><i>Background:</i></b> Obesity is the main obstacle for metabolic control in patients with type 2 diabetes. Turkey has the highest prevalence of obesity and type 2 diabetes in Europe. The effect of obesity on the metabolic control, and the macro- and microvascular complications of patients are not apparent. <b><i>Objectives:</i></b> This nationwide survey aimed to investigate the prevalence of overweight and obesity among patients with type 2 diabetes and to search for the impact of obesity on the metabolic control of these patients. We also investigated the independent associates of obesity in patients with type 2 diabetes. <b><i>Methods:</i></b> We consecutively enrolled patients who were under follow-up for at least 1 year in 69 tertiary healthcare units in 37 cities. The demographic, anthropometric, and clinical data including medications were recorded. Patients were excluded if they were pregnant, younger than 18 years, had decompensated liver disease, psychiatric disorders interfering with cognition or compliance, had bariatric surgery, or were undergoing renal replacement therapy. <b><i>Results:</i></b> Only 10% of patients with type 2 diabetes (<i>n</i> = 4,648) had normal body mass indexes (BMI), while the others were affected by overweight (31%) or obesity (59%). Women had a significantly higher prevalence of obesity (53.4 vs. 40%) and severe obesity (16.6 vs. 3.3%). Significant associations were present between high BMI levels and lower education levels, intake of insulin, antihypertensives and statins, poor metabolic control, or the presence of microvascular complications. Age, gender, level of education, smoking, and physical inactivity were the independent associates of obesity in patients with type 2 diabetes. <b><i>Conclusion:</i></b> The TEMD Obesity Study shows that obesity is a major determinant of the poor metabolic control in patients with type 2 diabetes. These results underline the importance of prevention and management of obesity to improve health care in patients with type 2 diabetes. Also, the results point out the independent sociodemographic and clinical associates of obesity, which should be the prior targets to overcome, in the national fight with obesity.
DOI: 10.6084/m9.figshare.7867919.v1
title: Evaluation of anti-inflammatory impact of dexamethasone-loaded PCL-PEG-PCL micelles on endotoxin-induced uveitis in rabbits

description: The aim of this study was to investigate the capability of polycaprolactone-polyethylene glycol-polycaprolactone (PCL-PEG-PCL) micelles in improving the anti-inflammatory effects of dexamethasone (DEX). A film hydration method was used for the preparation of the DEX-loaded PCL-PEG-PCL micelles. <i>In vitro</i> cytotoxicity of the micelles obtained was investigated on L929 cells. Cellular uptake was studied by using flow cytometry and fluorescence microscopy. Anterior uveitis was induced in a group of rabbits by intravitreal injection of endotoxin from <i>Salmonella typhimurium</i>. The severity of inflammation-induced was clinically graded by using Hogan’s classification method. Protein concentration in the aqueous humor was also measured. The micelles exhibited suitable compatibility on L929 cells and were taken up by the cells in a concentration- and time-dependent manner. The DEX-loaded micelles could reduce the clinical symptoms of uveitis after a lag-time. At 24 and 36 h after the LPS injection, the PCL-PEG-PCL micelles showed a better inhibitory effect on uveitis than the marketed eye drop, the differences did not reach significant levels though. This study demonstrated the potential of the PCL-PEG-PCL micelles as carriers for DEX in treating anterior uveitis. However, this concept is still to be further investigated.
DOI: 10.6084/m9.figshare.7867925.v2
title: Soft-walled monothalamids (Rhizaria: foraminifera) of the Crimean shelf (Black Sea): taxonomic composition and inter-regional patterns of species diversity and distribution

description: We present new data on monothalamous (single-chambered) foraminifera from the Black Sea Crimean shelf zone between Karkinitsky Gulf in the west to the area near Kerch in the east. Within this region we recognized a total of 40 morphospecies; 8 are assigned, in some cases tentatively, to known species and another 9 to known genera, again sometimes tentatively. Twelve species (all undescribed) are reported here for the first time. The most abundant species are <i>Psammophaga</i> sp. (<i>sensu</i> Gooday et al. 2011), <i>Goodayia</i> <i>rostellata</i> Sergeeva & Anikeeva 2008 and <i>Vellaria pellucida</i> Gooday & Fernando 1992, each of which is evenly distributed in all studied areas. The highest species richness of monothalamous foraminifera was observed in the Yalta region. Based on a multivariate analysis of monothalamid assemblage structure and diversity indices [Shannon (H’), Margalef (D’), eveness Pielou (J’), Simpson (1-<b>λ’</b>) and rarefaction ES(n)], we recognized three groups of stations, corresponding to the Western, Southern and Eastern coasts of the Crimean peninsula. The monothalamid assemblages found in each of these coastal regions exhibit different structural features and are distinguished by certain characteristic species.
DOI: 10.6084/m9.figshare.7867874
title: Supplementary Material for: Identification of MazF Homologue in <b><i>Legionella pneumophila</i></b> Which Cleaves RNA at the AACU Sequence

description: MazF is a sequence-specific endoribonuclease that is widely conserved in bacteria and archaea. Here, we found an MazF homologue (MazF-lp; LPO-p0114) in <i>Legionella pneumophila</i>.<i></i> The<i> mazF-lp</i> gene overlaps 14 base pairs with the upstream gene<i> mazE-lp</i> (MazE-lp; LPO-p0115). The induction of <i>mazF-lp</i> caused cell growth arrest, while <i>mazE-lp</i> co-induction recovered cell growth in <i>Escherichia coli</i>. In vivo<i></i> and<i></i> in vitro primer extension experiments showed that MazF-lp is a sequence-specific endoribonuclease cleaving RNA at AACU. The endoribonuclease activity of purified MazF-lp was inhibited by purified MazE-lp. We found that MazE-lp and the MazEF-lp complex specifically bind to the palindromic sequence present in the 5′-untranslated region of the <i>mazEF-lp</i> operon. MazE-lp and MazEF-lp both likely function as a repressor for the <i>mazEF-lp</i> operon and for other genes, including <i>icmR</i>, whose gene product functions as a secretion chaperone for the IcmQ pore-forming protein, by specifically binding to the palindromic sequence in 5′-UTR of these genes.
DOI: 10.6084/m9.figshare.7867868
title: Effects of gleno-humeral joint centre mislocation on gleno-humeral kinematics and kinetics

description: The gleno-humeral (GH) rotation centre is typically estimated using predictive or functional methods, however these methods may lead to location errors. This study aimed at determining a location error threshold above which statistically significant changes in the values of kinematic and kinetic GH parameters occur. The secondary aims were to quantify the effects of the direction of mislocation (X, Y or Z axis) of the GH rotation centre on GH kinematic and kinetic parameters. Shoulder flexion and abduction movements of 11 healthy volunteers were recorded using a standard motion capture system (Vicon, Oxford Metrics Ltd, Oxford, UK), then GH kinematic and kinetic parameters were computed. The true position of the GH rotation centre was determined using a low dose x-ray scanner (EOS™ imaging, France) and this position was transferred to the motion data. GH angles and moments were re-computed for each position of the GH rotation centre after errors of up to ± 20 mm were added in increments of ± 5 mm to each axis. The three-dimensional error range was 5 mm to 34.65 mm. GH joint angle and moment values were significantly altered from 10 mm of three-dimensional error, and from 5 mm of error on individual axes. However, errors on the longitudinal and antero-posterior axes only caused very small alterations of GH joint angle and moment values respectively. Future research should develop methods of GH rotation centre estimation that produce three-dimensional location errors of less than 10 mm to reduce error propagation on GH kinematics and kinetics.
DOI: 10.6084/m9.figshare.7867874.v1
title: Supplementary Material for: Identification of MazF Homologue in <b><i>Legionella pneumophila</i></b> Which Cleaves RNA at the AACU Sequence

description: MazF is a sequence-specific endoribonuclease that is widely conserved in bacteria and archaea. Here, we found an MazF homologue (MazF-lp; LPO-p0114) in <i>Legionella pneumophila</i>.<i></i> The<i> mazF-lp</i> gene overlaps 14 base pairs with the upstream gene<i> mazE-lp</i> (MazE-lp; LPO-p0115). The induction of <i>mazF-lp</i> caused cell growth arrest, while <i>mazE-lp</i> co-induction recovered cell growth in <i>Escherichia coli</i>. In vivo<i></i> and<i></i> in vitro primer extension experiments showed that MazF-lp is a sequence-specific endoribonuclease cleaving RNA at AACU. The endoribonuclease activity of purified MazF-lp was inhibited by purified MazE-lp. We found that MazE-lp and the MazEF-lp complex specifically bind to the palindromic sequence present in the 5′-untranslated region of the <i>mazEF-lp</i> operon. MazE-lp and MazEF-lp both likely function as a repressor for the <i>mazEF-lp</i> operon and for other genes, including <i>icmR</i>, whose gene product functions as a secretion chaperone for the IcmQ pore-forming protein, by specifically binding to the palindromic sequence in 5′-UTR of these genes.
DOI: 10.6084/m9.figshare.7867868.v1
title: Effects of gleno-humeral joint centre mislocation on gleno-humeral kinematics and kinetics

description: The gleno-humeral (GH) rotation centre is typically estimated using predictive or functional methods, however these methods may lead to location errors. This study aimed at determining a location error threshold above which statistically significant changes in the values of kinematic and kinetic GH parameters occur. The secondary aims were to quantify the effects of the direction of mislocation (X, Y or Z axis) of the GH rotation centre on GH kinematic and kinetic parameters. Shoulder flexion and abduction movements of 11 healthy volunteers were recorded using a standard motion capture system (Vicon, Oxford Metrics Ltd, Oxford, UK), then GH kinematic and kinetic parameters were computed. The true position of the GH rotation centre was determined using a low dose x-ray scanner (EOS™ imaging, France) and this position was transferred to the motion data. GH angles and moments were re-computed for each position of the GH rotation centre after errors of up to ± 20 mm were added in increments of ± 5 mm to each axis. The three-dimensional error range was 5 mm to 34.65 mm. GH joint angle and moment values were significantly altered from 10 mm of three-dimensional error, and from 5 mm of error on individual axes. However, errors on the longitudinal and antero-posterior axes only caused very small alterations of GH joint angle and moment values respectively. Future research should develop methods of GH rotation centre estimation that produce three-dimensional location errors of less than 10 mm to reduce error propagation on GH kinematics and kinetics.
DOI: 10.6084/m9.figshare.7867847
title: Accession Table from Stochastic processes drive rapid genomic divergence during experimental range expansions

description: This table contains the NCBI Sequence Read Archive accession numbers for all experimental populations. Populations are identified by replicate, generation, and location separated by underscores.
DOI: 10.15468/dl.wp2ujh
title: Occurrence Download

description: A dataset containing 322 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "TaxonKey is Rousettus leschenaultii (Desmarest, 1820)",
 "Year 1970-2000"
 ]
}

 The dataset includes 322 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041453-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ns6rfh
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Justicia anisotoides J.R.I.Wood"
 ]
}

 The dataset includes 7 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041454-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25427797
title: Raw Data.zip

description: This dataset contains 16, 175 statements with various attitudes such as negative (0), positive (2), and neutral (1). Our dataset contains the following topics: curriculum or training program (1), lecturer (0), facilities (2), and other (3). The study collected feedback from students and teachers from 2013 to 2016, at the conclusion of each semester, using an automated survey system. The survey system used a 5-point Likert scale to evaluate the stated criteria and open-ended forms to gather more detailed feedback.
DOI: 10.6084/m9.figshare.25427797.v1
title: Raw Data.zip

description: This dataset contains 16, 175 statements with various attitudes such as negative (0), positive (2), and neutral (1). Our dataset contains the following topics: curriculum or training program (1), lecturer (0), facilities (2), and other (3). The study collected feedback from students and teachers from 2013 to 2016, at the conclusion of each semester, using an automated survey system. The survey system used a 5-point Likert scale to evaluate the stated criteria and open-ended forms to gather more detailed feedback.
DOI: 10.15468/dl.beqwte
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Allophylus gentryi Croat"
 ]
}

 The dataset includes 46 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041457-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hxqrv6
title: Occurrence Download

description: A dataset containing 5711 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is one of (South America, North America)",
 "OccurrenceStatus is Present",
 "TaxonKey is Bradypus variegatus Schinz, 1825",
 "Year 1970-2024"
 ]
}

 The dataset includes 5711 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041458-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2fbq8y
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Justicia ankaratrensis Benoist"
 ]
}

 The dataset includes 10 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041459-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qehwhq
title: Occurrence Download

description: A dataset containing 1063 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Chromolaena odorata (L.) R.M.King & H.Rob."
 ]
}

 The dataset includes 1063 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041461-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ym2rwe
title: Occurrence Download

description: A dataset containing 247 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Quercus guyavifolia H.Lév."
 ]
}

 The dataset includes 247 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041463-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bg42zq
title: Occurrence Download

description: A dataset containing 3168 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lastreopsis decomposita (R.Br.) Tindale"
 ]
}

 The dataset includes 3168 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041460-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f3kfgj
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Allophylus glabratus (Kunth) Radlk."
 ]
}

 The dataset includes 154 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041464-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t7mecu
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Justicia ankazobensis Benoist"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041465-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fxj9qc
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leonotis myrothamnifolia Iwarsson & Y.B.Harv."
 ]
}

 The dataset includes 6 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041466-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hbd2s6
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Allophylus jamaicensis Radlk."
 ]
}

 The dataset includes 47 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041468-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17876/plate/dr.3/envelopes/101_9452
title: Digital object identifier (DOI) for the envelope 9452 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9453
title: Digital object identifier (DOI) for the envelope 9453 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9454
title: Digital object identifier (DOI) for the envelope 9454 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9455
title: Digital object identifier (DOI) for the envelope 9455 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9456
title: Digital object identifier (DOI) for the envelope 9456 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9457
title: Digital object identifier (DOI) for the envelope 9457 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9458
title: Digital object identifier (DOI) for the envelope 9458 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9459
title: Digital object identifier (DOI) for the envelope 9459 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9460
title: Digital object identifier (DOI) for the envelope 9460 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9461
title: Digital object identifier (DOI) for the envelope 9461 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9462
title: Digital object identifier (DOI) for the envelope 9462 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9463
title: Digital object identifier (DOI) for the envelope 9463 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9464
title: Digital object identifier (DOI) for the envelope 9464 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9465
title: Digital object identifier (DOI) for the envelope 9465 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9466
title: Digital object identifier (DOI) for the envelope 9466 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9467
title: Digital object identifier (DOI) for the envelope 9467 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9468
title: Digital object identifier (DOI) for the envelope 9468 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9469
title: Digital object identifier (DOI) for the envelope 9469 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9470
title: Digital object identifier (DOI) for the envelope 9470 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9471
title: Digital object identifier (DOI) for the envelope 9471 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9472
title: Digital object identifier (DOI) for the envelope 9472 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9473
title: Digital object identifier (DOI) for the envelope 9473 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9474
title: Digital object identifier (DOI) for the envelope 9474 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9475
title: Digital object identifier (DOI) for the envelope 9475 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9476
title: Digital object identifier (DOI) for the envelope 9476 in archive 101 from the APPLAUSE DR3
DOI: 10.17876/plate/dr.3/envelopes/101_9477
title: Digital object identifier (DOI) for the envelope 9477 in archive 101 from the APPLAUSE DR3