cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.6230405.v1
title: Chapter 5: Connectivity matrix

description: Mean connectivity matrix of black cod along NSW for the years 2004-2011
DOI: 10.6084/m9.figshare.6229466
title: SING 2017 source data

description: This is the source data for 'Streamwatch Indications for New Guidelines report, SING 2017'.The report was written using data collected by 32 Streamwatch groups across 63 monitoring sites in the Greater Sydney region. This data was derived from measurements taken between December 1990 and June 2016. In all, 32,125 recorded parameter values were utilised in the analysis.The Streamwatch data archive is much larger than the dataset used here, however for purposes of volunteer utility, sub-catchment relevant scale, contemporary relevance and statistical strength, only site records for groups active as of June 2016 and having reasonable duration time series, were used for the report. A similar approach utilising a much bigger dataset is possible if all records from 'Streamwatch historical survey data December1990-June2016' were included, however data quality is more uncertain.
DOI: 10.6084/m9.figshare.6229361
title: Streamwatch Sites; corrected coordinates up to July 2015

description: These data provide best estimates of the geographic location for 542 Streamwatch sites that were established between December 1990 and July 2015. Sites and their associated Streamwatch group were extracted from the decommissioned Oracle database that was used to house water quality data acquired through the citizen science program known as Streamwatch. The program supported volunteers to measure physical and chemical parameters of water quality across the Greater Sydney region, New South Wales, Australia. The revised coordinates are located in the columns labelled; ‘Latitude_update’ and ‘Longitude update’. Local government area (LGA_Portal) information may be out of date due to subsequent amalgamations. The creation of this spreadsheet was to provide a more correct, partially ground truthed resource of geospatial locations for sites listed in the file, ‘Streamwatch survey data 07121990_08062016’. Date format is dd/mm/yyyy.No effort to revise or validate coordinates for sites with less than 20 records was made. <br>
DOI: 10.6084/m9.figshare.6229337
title: Streamwatch historical survey data December1990-June2016

description: These partially quality coded data are from an extract from the decommissioned Oracle database that housed water quality data acquired through the citizen science program known as Streamwatch. The program supported volunteers to collect physical and chemical parameters of water quality across the Greater Sydney region, New South Wales, Australia. Data are from 30950 separate sampling events from December 1990 to June 2006. Date format is dd/mm/yyyy. The creation of these spreadsheets was to determine which data were good candidates for importing into the replacement database. There are two worksheets named; ‘Visits’ and ‘Results’. Each sampling event or survey on the ‘Visits’ sheet, has an associated unique identifier used to locate the associated water quality parameter data on the ‘Results’ sheet. Further information on site locations are available in the file, ‘Streamwatch Sites_coordinates_July2015.
DOI: 10.6084/m9.figshare.6229361.v1
title: Streamwatch Sites; corrected coordinates up to July 2015

description: These data provide best estimates of the geographic location for 542 Streamwatch sites that were established between December 1990 and July 2015. Sites and their associated Streamwatch group were extracted from the decommissioned Oracle database that was used to house water quality data acquired through the citizen science program known as Streamwatch. The program supported volunteers to measure physical and chemical parameters of water quality across the Greater Sydney region, New South Wales, Australia. The revised coordinates are located in the columns labelled; ‘Latitude_update’ and ‘Longitude update’. Local government area (LGA_Portal) information may be out of date due to subsequent amalgamations. The creation of this spreadsheet was to provide a more correct, partially ground truthed resource of geospatial locations for sites listed in the file, ‘Streamwatch survey data 07121990_08062016’. Date format is dd/mm/yyyy.No effort to revise or validate coordinates for sites with less than 20 records was made. <br>
DOI: 10.6084/m9.figshare.6229337.v1
title: Streamwatch historical survey data December1990-June2016

description: These partially quality coded data are from an extract from the decommissioned Oracle database that housed water quality data acquired through the citizen science program known as Streamwatch. The program supported volunteers to collect physical and chemical parameters of water quality across the Greater Sydney region, New South Wales, Australia. Data are from 30950 separate sampling events from December 1990 to June 2006. Date format is dd/mm/yyyy. The creation of these spreadsheets was to determine which data were good candidates for importing into the replacement database. There are two worksheets named; ‘Visits’ and ‘Results’. Each sampling event or survey on the ‘Visits’ sheet, has an associated unique identifier used to locate the associated water quality parameter data on the ‘Results’ sheet. Further information on site locations are available in the file, ‘Streamwatch Sites_coordinates_July2015.
DOI: 10.6084/m9.figshare.6229325
title: Digitized tongue pictures' Fractal

description: Fractal spectrums ƒ(α)-α of randomized fractal pictures were obtained, in which 8 parameters were used as characteristic quantities. αmin: The minimum value of singular exponent α; αmax: The maximum value of singular exponent α; ƒmin: Value of multiple fractal spectrum ƒ(α) corresponding to αmin; ƒmax Value of multiple fractal spectrum ƒ(α) corresponding to αmax; Spectral width: Value of αmax-αmin;； Spectral difference: Value of ƒmax-ƒmin;αd: Value of singular exponent α that resulted in maximum value of ƒ(α); B: One of the parameter in quadratic fit curve of ƒ(α), also termed as asymmetry degree.<br>
DOI: 10.6084/m9.figshare.6229325.v1
title: Digitized tongue pictures' Fractal

description: Fractal spectrums ƒ(α)-α of randomized fractal pictures were obtained, in which 8 parameters were used as characteristic quantities. αmin: The minimum value of singular exponent α; αmax: The maximum value of singular exponent α; ƒmin: Value of multiple fractal spectrum ƒ(α) corresponding to αmin; ƒmax Value of multiple fractal spectrum ƒ(α) corresponding to αmax; Spectral width: Value of αmax-αmin;； Spectral difference: Value of ƒmax-ƒmin;αd: Value of singular exponent α that resulted in maximum value of ƒ(α); B: One of the parameter in quadratic fit curve of ƒ(α), also termed as asymmetry degree.<br>
DOI: 10.6084/m9.figshare.6229301
title: Distribution, nymphal habitat, genetic structure and conservation of the New Zealand mayfly <i>Isothraulus abditus</i> (Insecta: Ephemeroptera) and a description of its subimago

description: Distribution, nymphal habitat and genetic structure of the New Zealand mayfly <i>Isothraulus abditus</i> were investigated to improve our understanding of its ecology and conservation status. A description of the undescribed subimaginal stage is also provided. <i>Isothraulus abditus</i> has now been recorded from 55 North Island streams, 47 being new to published literature. Its distribution currently extends from Mangonui in Northland to Taumatatahi near Whanganui. Nymphs live in forested stream pools and backwaters containing organic detritus. Genetic structure of six populations was assessed using the mitochondrial cytochrome <i>c</i> oxidase subunit I (COI) gene. Thirty-six haplotypes were identified from 123 individuals, and a maximum uncorrected genetic distance of 1.8% indicated that specimens belong to a single species. However, those within Northland showed some genetic differentiation. Restricted habitat, sparse distribution and some genetic differentiation of <i>I. abditus</i> suggest its conservation status should be classified as ‘At Risk’. LSID: urn:lsid:zoobank.org:pub:75C386BC-C0A5-4627-AE4B-8C5D749D53BA
DOI: 10.6084/m9.figshare.6229301.v1
title: Distribution, nymphal habitat, genetic structure and conservation of the New Zealand mayfly <i>Isothraulus abditus</i> (Insecta: Ephemeroptera) and a description of its subimago

description: Distribution, nymphal habitat and genetic structure of the New Zealand mayfly <i>Isothraulus abditus</i> were investigated to improve our understanding of its ecology and conservation status. A description of the undescribed subimaginal stage is also provided. <i>Isothraulus abditus</i> has now been recorded from 55 North Island streams, 47 being new to published literature. Its distribution currently extends from Mangonui in Northland to Taumatatahi near Whanganui. Nymphs live in forested stream pools and backwaters containing organic detritus. Genetic structure of six populations was assessed using the mitochondrial cytochrome <i>c</i> oxidase subunit I (COI) gene. Thirty-six haplotypes were identified from 123 individuals, and a maximum uncorrected genetic distance of 1.8% indicated that specimens belong to a single species. However, those within Northland showed some genetic differentiation. Restricted habitat, sparse distribution and some genetic differentiation of <i>I. abditus</i> suggest its conservation status should be classified as ‘At Risk’. LSID: urn:lsid:zoobank.org:pub:75C386BC-C0A5-4627-AE4B-8C5D749D53BA
DOI: 10.6084/m9.figshare.6229295
title: Starvation after feeding

description: starvation data after 4 days of adult feeding
DOI: 10.6084/m9.figshare.6229295.v1
title: Starvation after feeding

description: starvation data after 4 days of adult feeding
DOI: 10.6084/m9.figshare.6229289
title: Longevity results

description: longevity results
DOI: 10.6084/m9.figshare.6229289.v1
title: Longevity results

description: longevity results
DOI: 10.6084/m9.figshare.6229283
title: Egg to adult viability

description: Egg to adult viability of eggs developed on three P:C ratios, 1:1, 1:4 and 1:8
DOI: 10.6084/m9.figshare.6229283.v1
title: Egg to adult viability

description: Egg to adult viability of eggs developed on three P:C ratios, 1:1, 1:4 and 1:8
DOI: 10.6084/m9.figshare.6229277
title: Starvation before feeding

description: Starvation data before any adult feeding
DOI: 10.6084/m9.figshare.6229277.v1
title: Starvation before feeding

description: Starvation data before any adult feeding
DOI: 10.6084/m9.figshare.6229274
title: Adult foraging data

description: Exact measurements of yeast and sucrose liquid diet intake which is then converted to carbohydrate and protein amounts.
DOI: 10.6084/m9.figshare.6229274.v1
title: Adult foraging data

description: Exact measurements of yeast and sucrose liquid diet intake which is then converted to carbohydrate and protein amounts.
DOI: 10.6084/m9.figshare.6228986
title: Dyslipidemia-associated atherogenic oxidized lipids induce platelet hyperactivity through phospholipase Cγ2-dependent reactive oxygen species generation

description: Oxidized low-density lipoprotein (oxLDL) and associated oxidized phosphocholine-headgroup phospholipids (oxPCs) activate blood platelets through ligation of the scavenger receptor CD36. Previously, we found that oxLDL stimulated phosphorylation of phospholipase Cγ2 (PLCγ2). However, the functional relevance of PLCγ2 phosphorylation in oxLDL-mediated platelet hyperactivity remained elusive. Here, we set out to explore the functional importance of PLCγ2 in oxLDL-mediated platelet activation using human and genetically modified murine platelets. The CD36-specific oxidized phospholipid (oxPC<sub>CD36</sub>) triggered the generation of reactive oxygen species (ROS) in platelets under static and arterial flow conditions. The ROS generation in response to oxPC<sub>CD36</sub> was sustained for up to 3 h but ablated in CD36- and PLCγ2-deficient platelets. The functional importance of ROS generation in response to atherogenic lipid stress was examined through measurement of P-selectin expression. OxPC<sub>CD36</sub> induced P-selectin expression, but required up to 60 min incubation, consistent with the timeline for ROS generation. P-selectin expression was not observed in CD36- and PLCγ2-deficient mice. The ability of oxPC<sub>CD36</sub> and oxLDL to stimulate P-selectin expression was prevented by incubation of platelets with the ROS scavenger N-acetyl-cysteine (NAC) and the NOX-2 inhibitor gp91ds-tat, but not with the NOX-1 inhibitor ML171. In summary, we provide evidence that prolonged exposure to oxLDL-associated oxidized phospholipids induces platelet activation via NOX-2-mediated ROS production in a CD36- and PLCγ2-dependent manner.
DOI: 10.6084/m9.figshare.6228986.v1
title: Dyslipidemia-associated atherogenic oxidized lipids induce platelet hyperactivity through phospholipase Cγ2-dependent reactive oxygen species generation

description: Oxidized low-density lipoprotein (oxLDL) and associated oxidized phosphocholine-headgroup phospholipids (oxPCs) activate blood platelets through ligation of the scavenger receptor CD36. Previously, we found that oxLDL stimulated phosphorylation of phospholipase Cγ2 (PLCγ2). However, the functional relevance of PLCγ2 phosphorylation in oxLDL-mediated platelet hyperactivity remained elusive. Here, we set out to explore the functional importance of PLCγ2 in oxLDL-mediated platelet activation using human and genetically modified murine platelets. The CD36-specific oxidized phospholipid (oxPC<sub>CD36</sub>) triggered the generation of reactive oxygen species (ROS) in platelets under static and arterial flow conditions. The ROS generation in response to oxPC<sub>CD36</sub> was sustained for up to 3 h but ablated in CD36- and PLCγ2-deficient platelets. The functional importance of ROS generation in response to atherogenic lipid stress was examined through measurement of P-selectin expression. OxPC<sub>CD36</sub> induced P-selectin expression, but required up to 60 min incubation, consistent with the timeline for ROS generation. P-selectin expression was not observed in CD36- and PLCγ2-deficient mice. The ability of oxPC<sub>CD36</sub> and oxLDL to stimulate P-selectin expression was prevented by incubation of platelets with the ROS scavenger N-acetyl-cysteine (NAC) and the NOX-2 inhibitor gp91ds-tat, but not with the NOX-1 inhibitor ML171. In summary, we provide evidence that prolonged exposure to oxLDL-associated oxidized phospholipids induces platelet activation via NOX-2-mediated ROS production in a CD36- and PLCγ2-dependent manner.
DOI: 10.6084/m9.figshare.6227444
title: MSMS data (raw files).xlsx

description: HPLC-ESI-MS/MS spectra of thymosin fraction 5 from calf thymus, identified peptides: ubiquitin, prothymosin alpha, thymosin β<sub>4</sub>, thymosin β<sub>9</sub>, and SH3 binding glutamic acid-rich like protein 3 (SH3BGRL3) and fragments thereof. <br>
DOI: 10.6084/m9.figshare.6227444.v1
title: MSMS data (raw files).xlsx

description: HPLC-ESI-MS/MS spectra of thymosin fraction 5 from calf thymus, identified peptides: ubiquitin, prothymosin alpha, thymosin β<sub>4</sub>, thymosin β<sub>9</sub>, and SH3 binding glutamic acid-rich like protein 3 (SH3BGRL3) and fragments thereof. <br>
DOI: 10.6084/m9.figshare.6227396
title: complaints_full_filtered.csv

description: US consumer Complaint Dataset
DOI: 10.6084/m9.figshare.6227387
title: ESM_scenarios_ model_village_level from Rural plastic emissions into the largest mountain lake of the Eastern Carpathians

description: Detailed data of scenarios used for plastic pollution assessment of the lake
DOI: 10.6084/m9.figshare.6227387.v1
title: ESM_scenarios_ model_village_level from Rural plastic emissions into the largest mountain lake of the Eastern Carpathians

description: Detailed data of scenarios used for plastic pollution assessment of the lake
DOI: 10.6084/m9.figshare.6227345
title: Dose-response relationships of the sigmoid for urgency syndrome after gynecological radiotherapy

description: <b>Purpose:</b> To find out what organs and doses are most relevant for ‘radiation-induced urgency syndrome’ in order to derive the corresponding dose–response relationships as an aid for avoiding the syndrome in the future. <b>Material and methods:</b> From a larger group of gynecological cancer survivors followed-up 2–14 years, we identified 98 whom had undergone external beam radiation therapy but not brachytherapy and not having a stoma. Of those survivors, 24 developed urgency syndrome. Based on the loading factor from a factor analysis, and symptom frequency, 15 symptoms were weighted together to a score interpreted as the intensity of radiation-induced urgency symptom. On reactivated dose plans, we contoured the small intestine, sigmoid colon and the rectum (separate from the anal-sphincter region) and we exported the dose-volume histograms for each survivor. Dose–response relationships from respective risk organ and urgency syndrome were estimated by fitting the data to the Probit, RS, LKB and gEUD models. <b>Results:</b> The rectum and sigmoid colon have steep dose–response relationships for urgency syndrome for Probit, RS and LKB. The dose–response parameters for the rectum were <i>D<sub>50</sub></i><sub>:</sub> 51.3, 51.4, and 51.3 Gy, <i>γ<sub>50</sub></i> = 1.19 for all models, <i>s</i> was 7.0e<sup>−09</sup> for RS and <i>n</i> was 9.9 × 10<sup>7</sup> for LKB. For Sigmoid colon, <i>D<sub>50</sub></i> were 51.6, 51.6, and 51.5 Gy, <i>γ<sub>50</sub></i> were 1.20, 1.25, and 1.27, <i>s</i> was 2.8 for RS and <i>n</i> was 0.079 for LKB. <b>Conclusions:</b> Primarily the dose to sigmoid colon as well as the rectum is related to urgency syndrome among gynecological cancer survivors. Separate delineation of the rectum and sigmoid colon in order to incorporate the dose–response results may aid in reduction of the incidence of the urgency syndrome.
DOI: 10.6084/m9.figshare.6227345.v1
title: Dose-response relationships of the sigmoid for urgency syndrome after gynecological radiotherapy

description: <b>Purpose:</b> To find out what organs and doses are most relevant for ‘radiation-induced urgency syndrome’ in order to derive the corresponding dose–response relationships as an aid for avoiding the syndrome in the future. <b>Material and methods:</b> From a larger group of gynecological cancer survivors followed-up 2–14 years, we identified 98 whom had undergone external beam radiation therapy but not brachytherapy and not having a stoma. Of those survivors, 24 developed urgency syndrome. Based on the loading factor from a factor analysis, and symptom frequency, 15 symptoms were weighted together to a score interpreted as the intensity of radiation-induced urgency symptom. On reactivated dose plans, we contoured the small intestine, sigmoid colon and the rectum (separate from the anal-sphincter region) and we exported the dose-volume histograms for each survivor. Dose–response relationships from respective risk organ and urgency syndrome were estimated by fitting the data to the Probit, RS, LKB and gEUD models. <b>Results:</b> The rectum and sigmoid colon have steep dose–response relationships for urgency syndrome for Probit, RS and LKB. The dose–response parameters for the rectum were <i>D<sub>50</sub></i><sub>:</sub> 51.3, 51.4, and 51.3 Gy, <i>γ<sub>50</sub></i> = 1.19 for all models, <i>s</i> was 7.0e<sup>−09</sup> for RS and <i>n</i> was 9.9 × 10<sup>7</sup> for LKB. For Sigmoid colon, <i>D<sub>50</sub></i> were 51.6, 51.6, and 51.5 Gy, <i>γ<sub>50</sub></i> were 1.20, 1.25, and 1.27, <i>s</i> was 2.8 for RS and <i>n</i> was 0.079 for LKB. <b>Conclusions:</b> Primarily the dose to sigmoid colon as well as the rectum is related to urgency syndrome among gynecological cancer survivors. Separate delineation of the rectum and sigmoid colon in order to incorporate the dose–response results may aid in reduction of the incidence of the urgency syndrome.
DOI: 10.6084/m9.figshare.6227321
title: Multiconsensus from 14 Proteomes.xlsx

description: Proteins identified in the bacterial lysates of all isolates used in the study. See paper for further details.
DOI: 10.6084/m9.figshare.6227321.v1
title: Multiconsensus from 14 Proteomes.xlsx

description: Proteins identified in the bacterial lysates of all isolates used in the study. See paper for further details.
DOI: 10.6084/m9.figshare.6227318
title: Multiconsensus from 14 Secretomes.xlsx

description: All proteins identified in MABC isolates used for the study. See paper for further details.
DOI: 10.6084/m9.figshare.6227318.v1
title: Multiconsensus from 14 Secretomes.xlsx

description: All proteins identified in MABC isolates used for the study. See paper for further details.
DOI: 10.6084/m9.figshare.6227303
title: SwissProt Templates.xlsx

description: B-cell epitope templates created via SWISSProt. See paper for further details.<br>
DOI: 10.6084/m9.figshare.6227303.v1
title: SwissProt Templates.xlsx

description: B-cell epitope templates created via SWISSProt. See paper for further details.<br>
DOI: 10.6084/m9.figshare.6227135
title: WHO/UNICEF Strategic Review of IMCI & iCCM (2016)

description: Data sources for the 2016 WHO/UNICEF Strategic Review of IMCI and iCCM.
DOI: 10.6084/m9.figshare.6226991
title: The central role of morality in perceived humanness and unselfish behaviors

description: Datasets of Studies 1 and 2<br>
DOI: 10.6084/m9.figshare.6226991.v1
title: The central role of morality in perceived humanness and unselfish behaviors

description: Datasets of Studies 1 and 2<br>
DOI: 10.6084/m9.figshare.6226949
title: Characterization of Dynamic Wireless Body Area Network Channels During Walking.zip

description: In this work finite-difference time-domain (FDTD) was used for the investigation of dynamic wireless body area network (WBAN) channel characteristics during walking. Thus accounting for dynamic aspects and body postures. This involves the study of on-body, off-body, and body-to-body communication. The channels were investigated in terms of fade variation and their corresponding amplitude distributions. For on-body channels the fade variation was found to be periodic, with larger fade variations for the channels involving the nodes at the hand and thigh. For off-body and body-to-body channels, channels with absence of line of sight, experienced constructive and destructive interference as the distance between the end nodes changes, resulting in larger fade variations. For the amplitude distribution of the channels, a multivariate normal distribution was considered. The distribution has the capability of modeling channels together, and was considered because of the significant correlation between the channels. The resulting estimated multivariate distributions fit well with the simulated data, for on-body, off-body, and body-to-body channels.
DOI: 10.6084/m9.figshare.6226949.v1
title: Characterization of Dynamic Wireless Body Area Network Channels During Walking.zip

description: In this work finite-difference time-domain (FDTD) was used for the investigation of dynamic wireless body area network (WBAN) channel characteristics during walking. Thus accounting for dynamic aspects and body postures. This involves the study of on-body, off-body, and body-to-body communication. The channels were investigated in terms of fade variation and their corresponding amplitude distributions. For on-body channels the fade variation was found to be periodic, with larger fade variations for the channels involving the nodes at the hand and thigh. For off-body and body-to-body channels, channels with absence of line of sight, experienced constructive and destructive interference as the distance between the end nodes changes, resulting in larger fade variations. For the amplitude distribution of the channels, a multivariate normal distribution was considered. The distribution has the capability of modeling channels together, and was considered because of the significant correlation between the channels. The resulting estimated multivariate distributions fit well with the simulated data, for on-body, off-body, and body-to-body channels.