cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25392/leicester.data.14893341.v1
title: Figure 2B left AJ 160628 & 160718

description: This dataset comprises TIF files representing acquisitions in one single molecule experiment. There are two types of file. Each TIF file contains a stack of images representing a time series at a single filed of view. An accompanying text file indicates the laser in use at each frame. In this case, the exposure time for each frame was 20 msec. Illumination was by laser 2 (640 nm, Cy5) from time frames 1 to 98 and laser 1 (488 nm, mEGFP) from frames 99 to 599. Deviation (Dev) represents the deviation of the exiting laser as a result of autofocussing from the point at which all four quarters of a quartered photodiode were irradiated with equal intensity. The experiment was done by Andrew Jobbins.
DOI: 10.17028/rd.lboro.16722406
title: Supplementary Information Files for Application of a simple unstructured kinetic and cost of goods models to support T-cell therapy manufacture

description: Supplementary Information Files for Application of a simple unstructured kinetic and cost of goods models to support T-cell therapy manufacture<br>Manufacturing of cell therapy products requires sufficient understanding of the cell culture variables and associated mechanisms for adequate control and risk analysis. The aim of this study was to apply an unstructured ordinary differential equationbased model for prediction of T-cell bioprocess outcomes as a function of process input parameters. A series of models were developed to represent the growth of T-cells as a function of time, culture volumes, cell densities, and glucose concentration using data from the Ambr®15 stirred bioreactor system. The models were sufficiently representative of the process to predict the glucose and volume provision required to maintain cell growth rate and quantitatively defined the relationship between glucose concentration, cell growth rate, and glucose utilization rate. The models demonstrated that although glucose is a limiting factor in batch supplied medium, a delivery rate of glucose at significantly less than the maximal specific consumption rate (0.05 mg 1 ? 106 cell h1 ) will adequately sustain cell growth due to a lower glucose Monod constant determining glucose consumption rate relative to the glucose Monod constant determining cell growth rate. The resultant volume and exchange requirements were used as inputs to an operational BioSolve cost model to suggest a cost-effective T-cell manufacturing process with minimum cost of goods per million cells produced and optimal volumetric productivity in a manufacturing settings. These findings highlight the potential of a simple unstructured model of T-cell growth in a stirred tank system to provide a framework for control and optimization of bioprocesses for manufacture.<br>
DOI: 10.7795/720.20210928
title: Additional data for the publication "The blackbody radiation shift in strontium lattice clocks revisited"

description: The data sets provide additional information on the manuscript including data shown in graphs.
description: We acknowledge support by the project 18SIB05 ROCIT, which has received funding from the EMPIR programme co-financed by the Participating States and from the European Union's Horizon 2020 Research and Innovation Programme, and by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy EXC-2123 QuantumFrontiers - Project-ID 90837967, SFB 1464 TerraQ - Project-ID 434617780 within project A04, and SFB 1227 DQ-mat - Project-ID 274200144 - within project B02. This work was partially supported by the Max Planck-RIKEN-PTB Center for Time, Constants and Fundamental Symmetries.
DOI: 10.6084/m9.figshare.16722634.v1
title: Effect of Smoking on the blood concentration of 25-hydroxyvitamin-D and Testosterone at High and Low Altitude

description: <b>Objective:</b> This study investigated the effect of cigarette smoking and altitude on the blood level of 25 hydroxyvitamin-D and testosterone and the carotid arteries thickness. <b>Methods:</b><b> </b>This observational case- control study involved 37 non-smokers and 24 smokers from high altitude (≥2245 meters above sea level), and 40 smokers and 40 nonsmokers from low altitude area (39-283 meters above sea level). The blood testosterone level was determined spectrophotmetrically using a kit from HUMAN diagnostics while the 25-hyroxyvitamin concentration was measured by the use of the ELISA kit form CTK Bioteck. The IMT of the left and right carotid arteries was determined using the ultrasound imaging technique. <b>Results:</b> The smoking significantly increased the intima media thickness of the right and left carotid arteries at high and low altitudes (p- value ≤ 0.001). Smoking at high altitude significantly increased the concentration of 25- hydroxyvitamin D and testosterone while at low altitude it significantly decreased both of them (p- value≤ 0.046). <b>Conclusion: </b>At high altitude, smoking had positive effect on the blood concentration of 25- hydroxyvitamin D and testosterone whereas smoking at low altitude significantly decreased the blood concentration of both of 25- hydroxyvitamin D and testosterone.
DOI: 10.6084/m9.figshare.16722634
title: Effect of Smoking on the blood concentration of 25-hydroxyvitamin-D and Testosterone at High and Low Altitude

description: <b>Objective:</b> This study investigated the effect of cigarette smoking and altitude on the blood level of 25 hydroxyvitamin-D and testosterone and the carotid arteries thickness. <b>Methods:</b><b> </b>This observational case- control study involved 37 non-smokers and 24 smokers from high altitude (≥2245 meters above sea level), and 40 smokers and 40 nonsmokers from low altitude area (39-283 meters above sea level). The blood testosterone level was determined spectrophotmetrically using a kit from HUMAN diagnostics while the 25-hyroxyvitamin concentration was measured by the use of the ELISA kit form CTK Bioteck. The IMT of the left and right carotid arteries was determined using the ultrasound imaging technique. <b>Results:</b> The smoking significantly increased the intima media thickness of the right and left carotid arteries at high and low altitudes (p- value ≤ 0.001). Smoking at high altitude significantly increased the concentration of 25- hydroxyvitamin D and testosterone while at low altitude it significantly decreased both of them (p- value≤ 0.046). <b>Conclusion: </b>At high altitude, smoking had positive effect on the blood concentration of 25- hydroxyvitamin D and testosterone whereas smoking at low altitude significantly decreased the blood concentration of both of 25- hydroxyvitamin D and testosterone.
DOI: 10.21227/c5b9-kz15
title: UAV-assisted data collection of in the WSN monitoring

description: There are two data files, named 'Data1.mdb'and 'Data2.mdb'. A total of 87,272 pieces of data, including 43,607 pieces of data in file 'Data1.mdb'and 43,665 pieces of data in file 'Data2.mdb'. Please open them with ACCESS software.
DOI: 10.25934/00003434.1
title: IPD datapackage for study 'Randomized Evaluation of Long Term Anticoagulant Therapy (RE-LY) Comparing the Efficacy and Safety of Two Blinded Doses of Dabigatran Etexilate With Open Label Warfarin for the Prevention of Stroke and Systemic Embolism in Patients With Non-valvular Atrial Fibrillation: Prospective, Multi-centre, Parallel-group, Non-inferiority Trial (RE-LY Study)' included in Research Request: 'CSDR 2033 Transition Request (Shah)'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.5281/zenodo.5517020
title: VMADCP and ADCP datasets

description: Publicly available here are the in-situ datasets used in the work entitled "Where and How the East Madagascar Current Retroflects?" Description of data: Name: Data_used_in_EMC_retroflection_paper.zip (1) VMADCP datasets - Figure 2 (2) Long-term in situ observation from ADCP - Figure 6
DOI: 10.5281/zenodo.5517019
title: VMADCP and ADCP datasets

description: Publicly available here are the in-situ datasets used in the work entitled "Where and How the East Madagascar Current Retroflects?" Description of data: Name: Data_used_in_EMC_retroflection_paper.zip (1) VMADCP datasets - Figure 2 (2) Long-term in situ observation from ADCP - Figure 6
DOI: 10.6084/m9.figshare.16722691
title: Raw FASTQ Files

description: The data included are the raw FASTQ files for this project
DOI: 10.6084/m9.figshare.16722691.v1
title: Raw FASTQ Files

description: The data included are the raw FASTQ files for this project
DOI: 10.6084/m9.figshare.16722589.v4
title: Scavenger guild and consumption patterns of an invasive alien fish species in a Mediterranean wetland

description: Database showing in detail all data obtained from each common carp (<i>Ciprinus carpio</i>) carcass to record the terrestrial vertebrate scavenger assemblage in El Hondo Natural Park, south-eastern Spain.<b> </b> <br>
DOI: 10.5066/p9wdq4vf
title: Regional screening for managed aquifer recharge suitability in Jordan, Lebanon, and surrounding areas

description: The U.S. Geological Survey (USGS), in cooperation with the U.S. Agency for International Development, Arab Water Council, Hydrology.NL, National Center for Research and Development (Jordan), and American University of Beirut, completed a project for acceleration of aquifer storage and recovery in the Middle East and North Africa (MENA) region. The MENA region is globally the most water-scarce region with only two percent of the global average annual rainfall. Unsustainable groundwater withdrawals have caused groundwater levels to decline. Groundwater quality has also degraded due to seawater intrusion in coastal areas and infiltration of incompletely treated wastewaters. Managed aquifer recharge (MAR) is an established water resources management practice to help sustain groundwater resources and increase water supply and security. The project team prepared regional screening maps of MAR suitability based on accumulated runoff and land surface slope to illustrate suitability mapping methods and highlight areas of suitable runoff and slope that may be appropriate for MAR in Jordan, Lebanon, and surrounding areas. The datasets included in this Data Release are: Map 1 prepared using tabular ranking of combinations of different classes of slope and runoff, and Map 2 prepared using multi-criteria decision analysis for slope and runoff. For detailed description of each dataset please see the associated report "Managed Aquifer Recharge Suitability-Regional Screening and Case Studies in Jordan and Lebanon".
DOI: 10.6084/m9.figshare.16722724
title: Serum and Rumen Fluid Metabolome

description: Rumen fluid and serum metabolomes
DOI: 10.5066/p9vhmo56
title: Deep learning approaches for improving prediction of daily stream temperature in data-scarce, unmonitored, and dammed basins

description: This data release provides all data and code used in Rahmani et al. (2021b) to model stream temperature and assess results. Briefly, we modeled stream temperature at sites across the continental United States using deep learning methods. The associated manuscript explores the prediction challenges posed by reservoirs, the value of additional training sites when predicting in gaged vs ungaged sites, and the value of an ensemble of attribute subsets in improving prediction accuracy. The data are organized into these child items: Site Information - Attributes and spatial information about the monitoring sites and basins in this study Observations - Water temperature observations for the sites used in this study Model Inputs - Model input, including meteorological drivers and discharge Model Code - Model code, instructions, and configurations for running the stream temperature models Model Predictions - Predictions of stream water temperature This research was funded by the Integrated Water Prediction Program at the US Geological Survey. The publication associated with this data release is Rahmani, F., Shen, C., Oliver, S.K., Lawson, K., and Appling, A.P., 2021, Deep learning approaches for improving prediction of daily stream temperature in data-scarce, unmonitored, and dammed basins. Hydrologic Processes. DOI: XX.
DOI: 10.6084/m9.figshare.16722589
title: Scavenger guild and consumption patterns of an invasive alien fish species in a Mediterranean wetland

description: Database showing in detail all data obtained from each common carp (<i>Ciprinus carpio</i>) carcass to record the terrestrial vertebrate scavenger assemblage in El Hondo Natural Park, south-eastern Spain.<b> </b> <br>
DOI: 10.15468/kmjek7
title: Three new species of genus Pylaemenes Stål (Phasmatodea: Heteropterygidae: Dataminae) from Vietnam

description: This dataset contains the digitized treatments in Plazi based on the original journal article Ho, Wai-Chun George (2018): Three new species of genus Pylaemenes Stål (Phasmatodea: Heteropterygidae: Dataminae) from Vietnam. Zoological Systematics 43 (3): 276-282, DOI: 10.11865/zs.201826, URL: http://zoobank.org/1eb06248-12d9-4fce-843a-de2e33024d67
DOI: 10.15129/c63e0665-f442-46a2-952b-4cded4c16194
title: Data for: "Study on the vertical ultrasonic vibration-assisted nanomachining process on single-crystal silicon"

description: The dataset contains numerical data to illustrate the relationship between machined depth of nanochannels and applied normal load and tip feed rate when machining using SS and UVS approaches. The data can be read by using origin software.
DOI: 10.15468/yq76kb
title: Three new species of eriophyid mites from Wanglang Nature Reserve, Sichuan, China (Acari: Eriophyidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Xie, Manchao (2018): Three new species of eriophyid mites from Wanglang Nature Reserve, Sichuan, China (Acari: Eriophyidae). Zoological Systematics 43 (4): 429-436, DOI: 10.11865/zs.201837, URL: http://zoobank.org/8b757d16-db73-4263-83bd-823b8b08dc7d
DOI: 10.5281/zenodo.5544057
title: SASC: A Simple Approach to Synthetic Cohorts. Applying COVID-19 clinical data to generate longitudinal observational patient cohorts and comparison with alternative synthetic cohort approaches as well as real patient data

description: Subset from COVID-19 Dataset from https://zenodo.org/record/3766350#.YVcfyTFBxgA. Used as reference for a publication dealing with synthetic patient cohort generation.
description: The numeric value and demographic have not been changed. The variable names have been simplified with respect to original in https://zenodo.org/record/3766350#.YVcfyTFBxgA
DOI: 10.5281/zenodo.5544056
title: SASC: A Simple Approach to Synthetic Cohorts. Applying COVID-19 clinical data to generate longitudinal observational patient cohorts and comparison with alternative synthetic cohort approaches as well as real patient data

description: Subset from COVID-19 Dataset from https://zenodo.org/record/3766350#.YVcfyTFBxgA. Used as reference for a publication dealing with synthetic patient cohort generation.
description: The numeric value and demographic have not been changed. The variable names have been simplified with respect to original in https://zenodo.org/record/3766350#.YVcfyTFBxgA
DOI: 10.6084/m9.figshare.16722790.v1
title: Online Supplementary materials

description: <b>Title:</b> Genetically predicted lifelong circulating 25(OH)D levels are associated with serum calcium levels and kidney stone risk. <b>Running head: </b>vitamin D, calcium and kidney stone<b></b> <b>Authors: </b>Zhongyu Jian<sup>a,b</sup>, Yu Huang<sup>c</sup>, Yazhou He<sup>d</sup>, Xi Jin<sup>a</sup>, Hong Li<sup>a</sup>, Sheyu Li<sup>e,f,g*</sup>, Kunjie Wang<sup>a,*</sup>. <b>Affiliations: </b> <b><sup>a</sup></b>Department of Urology, Institute of Urology (Laboratory of Reconstructive Urology), West China Hospital, Sichuan University, Chengdu, People's Republic of China. <sup>b</sup>West China Biomedical Big Data Center, Sichuan University, Chengdu, People's Republic of China. <sup>c</sup>Guangdong Eye Institute, Department of Ophthalmology, Guangdong Provincial People’s Hospital, Guangdong Academy of Medical Sciences, Guangzhou, China. <sup>d</sup>West China School of Public Health and West China Fourth Hospital, Sichuan University, China. <sup>e</sup>Department of Endocrinology and Metabolism, West China Hospital, Sichuan University, Chengdu, China.<sup></sup> <sup>f</sup>Chinese Evidence-based Medicine Center, Cochrane China Center and MAGIC China Center, West China Hospital, Sichuan University, Chengdu, China. <sup>g</sup>Engineering Research Center of Medical Information Technology, Ministry of Education, West China Hospital, Sichuan University, Chengdu, China. <b>*Corresponding author: </b>Kunjie Wang; Mailing address: Department of Urology, West China Hospital, Sichuan University, No.37 Guoxue Alley, Wuhou District, Chengdu City, Sichuan Province, PR China. Telephone number: +86-189-8060-1848. E-mail address: wangkj@scu.edu.cn. Sheyu Li; Mailing address: Department of Endocrinology and Metabolism, Chinese Evidence-based Medicine Center, Cochrane China Center and MAGIC China Center, Engineering Research Center of Medical Information Technology, Ministry of Education, West China Hospital, Sichuan University, No.37 Guoxue Alley, Wuhou District, Chengdu City, Sichuan Province, PR China. E-mail address: lisheyu@gmail.com. <b>Keywords: </b>Mendelian randomization; kidney stone disease; nephrolithiasis; vitamin D.<b></b>
DOI: 10.6084/m9.figshare.16722790
title: Online Supplementary materials

description: <b>Title:</b> Genetically predicted lifelong circulating 25(OH)D levels are associated with serum calcium levels and kidney stone risk. <b>Running head: </b>vitamin D, calcium and kidney stone<b></b> <b>Authors: </b>Zhongyu Jian<sup>a,b</sup>, Yu Huang<sup>c</sup>, Yazhou He<sup>d</sup>, Xi Jin<sup>a</sup>, Hong Li<sup>a</sup>, Sheyu Li<sup>e,f,g*</sup>, Kunjie Wang<sup>a,*</sup>. <b>Affiliations: </b> <b><sup>a</sup></b>Department of Urology, Institute of Urology (Laboratory of Reconstructive Urology), West China Hospital, Sichuan University, Chengdu, People's Republic of China. <sup>b</sup>West China Biomedical Big Data Center, Sichuan University, Chengdu, People's Republic of China. <sup>c</sup>Guangdong Eye Institute, Department of Ophthalmology, Guangdong Provincial People’s Hospital, Guangdong Academy of Medical Sciences, Guangzhou, China. <sup>d</sup>West China School of Public Health and West China Fourth Hospital, Sichuan University, China. <sup>e</sup>Department of Endocrinology and Metabolism, West China Hospital, Sichuan University, Chengdu, China.<sup></sup> <sup>f</sup>Chinese Evidence-based Medicine Center, Cochrane China Center and MAGIC China Center, West China Hospital, Sichuan University, Chengdu, China. <sup>g</sup>Engineering Research Center of Medical Information Technology, Ministry of Education, West China Hospital, Sichuan University, Chengdu, China. <b>*Corresponding author: </b>Kunjie Wang; Mailing address: Department of Urology, West China Hospital, Sichuan University, No.37 Guoxue Alley, Wuhou District, Chengdu City, Sichuan Province, PR China. Telephone number: +86-189-8060-1848. E-mail address: wangkj@scu.edu.cn. Sheyu Li; Mailing address: Department of Endocrinology and Metabolism, Chinese Evidence-based Medicine Center, Cochrane China Center and MAGIC China Center, Engineering Research Center of Medical Information Technology, Ministry of Education, West China Hospital, Sichuan University, No.37 Guoxue Alley, Wuhou District, Chengdu City, Sichuan Province, PR China. E-mail address: lisheyu@gmail.com. <b>Keywords: </b>Mendelian randomization; kidney stone disease; nephrolithiasis; vitamin D.<b></b>
DOI: 10.5517/ccdc.csd.cc23pqk3
title: CCDC 1957295: Experimental Crystal Structure Determination

description: Related Article: Karabi Nath, Abdulla Bin Rahaman, Rajib Moi, Kartik Maity, Kumar Biradha|2020|Chem.Commun.|56|14873|doi:10.1039/D0CC05728B
DOI: 10.5517/ccdc.csd.cc26j6rq
title: CCDC 2041373: Experimental Crystal Structure Determination

description: Related Article: Himadri S. Karmakar, Chandan Kumar, Neha Rani Kumar, Sarasija Das, Abhijeet R. Agrawal, Nani Gopal Ghosh, Sanjio S. Zade|2021|J.Org.Chem.|86|12494|doi:10.1021/acs.joc.1c00689
DOI: 10.5517/ccdc.csd.cc26kjnz
title: CCDC 2042641: Experimental Crystal Structure Determination

description: Related Article: Himadri S. Karmakar, Chandan Kumar, Neha Rani Kumar, Sarasija Das, Abhijeet R. Agrawal, Nani Gopal Ghosh, Sanjio S. Zade|2021|J.Org.Chem.|86|12494|doi:10.1021/acs.joc.1c00689
DOI: 10.5517/ccdc.csd.cc26q67d
title: CCDC 2047123: Experimental Crystal Structure Determination

description: Related Article: Chandan Gharui, Chandrakanta Parida, Subhas Chandra Pan|2021|J.Org.Chem.|86|13071|doi:10.1021/acs.joc.1c00435
DOI: 10.5517/ccdc.csd.cc26q649
title: CCDC 2047120: Experimental Crystal Structure Determination

description: Related Article: Chandan Gharui, Chandrakanta Parida, Subhas Chandra Pan|2021|J.Org.Chem.|86|13071|doi:10.1021/acs.joc.1c00435
DOI: 10.5517/ccdc.csd.cc26qx62
title: CCDC 2047804: Experimental Crystal Structure Determination

description: Related Article: Himadri S. Karmakar, Chandan Kumar, Neha Rani Kumar, Sarasija Das, Abhijeet R. Agrawal, Nani Gopal Ghosh, Sanjio S. Zade|2021|J.Org.Chem.|86|12494|doi:10.1021/acs.joc.1c00689
DOI: 10.25386/genetics.14787438
title: Supplemental Material for Ruchert et al., 2021

description: This is the raw data of fly progeny sex that was used for statistical analyses for figures 2, 5, 6.
DOI: 10.25386/genetics.14787438.v1
title: Supplemental Material for Ruchert et al., 2021

description: This is the raw data of fly progeny sex that was used for statistical analyses for figures 2, 5, 6.
DOI: 10.5281/zenodo.5542935
title: Datasets for :Atmospheric chemistry of oxalate: Insight into the role of relative humidity and acidity from high-resolution observation.

description: The datasets in this file were used to generate figures for the paper titled"Atmospheric chemistry of oxalate: Insight into the role of relative humidity and acidity from high-resolution observation. The datasets include the hourly concentration of atmospheric composition and meteorological parameters in Nanjing Area.
DOI: 10.5281/zenodo.5542924
title: Datasets for :Atmospheric chemistry of oxalate: Insight into the role of relative humidity and acidity from high-resolution observation.

description: The datasets in this file were used to generate figures for the paper titled"Atmospheric chemistry of oxalate: Insight into the role of relative humidity and acidity from high-resolution observation. The datasets include the hourly concentration of atmospheric composition and meteorological parameters in Nanjing Area.
DOI: 10.5281/zenodo.5542925
title: dataset for manuscript and supporting information

description: The datasets in this file were used to generate figures for the paper titled"Atmospheric chemistry of oxalate: Insight into the role of relative humidity and acidity from high-resolution observation. The datasets include the hourly concentration of atmospheric composition and meteorological parameters in Nanjing Area.
DOI: 10.5281/zenodo.5510699
title: Data and script for analyses from the manuscript titled: Contaminant metal concentrations in three species of aquatic macrophytes from the Coeur d'Alene Lake basin, USA..

description: These files include R statistical software script, an archived "project" file, and a "ReadMe.rtf" file. See the "ReadMe.rtf" file for further instructions. Also, please see the full article for more detail at: Scofield, B.D., Torso, K., Fields, S.F., & D.W. Chess<em>.</em> Contaminant metal concentrations in three species of aquatic macrophytes from the Coeur d’Alene Lake basin, USA. <em>Environ Monit Assess</em> <strong>193, </strong>683 (2021). https://doi.org/10.1007/s10661-021-09488-y