cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.qtzsc4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pelecaniformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-120 -70,-110 -70,-110 -60,-120 -60,-120 -70))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022715-251009101135966/datasets/export for details.
DOI: 10.15468/dl.t5mr3u
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rubus firmus",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022712-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kpmftq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pelecaniformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-130 -70,-120 -70,-120 -60,-130 -60,-130 -70))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022713-251009101135966/datasets/export for details.
DOI: 10.15468/dl.ajsnpm
title: Occurrence Download

description: A dataset containing 21472 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cuculiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((40 -20,50 -20,50 -10,40 -10,40 -20))"
 ]
}

 The dataset includes 21472 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022714-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.532jzu
title: Occurrence Download

description: A dataset containing 45 records in GBIF matching the query:
SELECT "year", COUNT(*) as RecordsCount 
 FROM occurrence
 WHERE "year" &gt;= 1970 
 AND level0gid = 'KNA'
 AND countrycode = 'KN'
 AND (kingdom = 'Plantae' OR kingdom = 'Animalia') 
 AND (basisOfRecord = 'OBSERVATION' OR basisOfRecord = 'LIVING_SPECIMEN' OR basisOfRecord = 'MATERIAL_SAMPLE' OR basisOfRecord = 'HUMAN_OBSERVATION' OR basisOfRecord = 'MACHINE_OBSERVATION' OR basisOfRecord = 'OCCURRENCE')
 AND occurrenceStatus = 'PRESENT' 
 AND decimalLongitude IS NOT NULL 
 AND decimalLatitude IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID') 
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE') 
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE') 
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH') 
 GROUP BY "year"
 ORDER BY "year"

 The dataset's 45 records were derived from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022686-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29526377
title: Telomere-to-telomere haplotype-resolved genome assembly and annotation of a female oyster pompano (<i>Trachinotus anak</i>)

description: We report a telomere-to-telomere (T2T), haplotype-resolved genome assembly of a female oyster pompano (<i>Trachinotus anak</i>), an important marine aquaculture species. HiFi, ONT ultra-long and Hi-C sequencing data were used to generate two gap-free chromosome-level haplotypes with complete telomere coverage. This assembly provides a valuable genomic resource for studying sex determination, adaptive evolution, and molecular breeding in <i>T. anak </i>and related Carangidae species.
DOI: 10.6084/m9.figshare.29526377.v2
title: Telomere-to-telomere haplotype-resolved genome assembly and annotation of a female oyster pompano (<i>Trachinotus anak</i>)

description: We report a telomere-to-telomere (T2T), haplotype-resolved genome assembly of a female oyster pompano (<i>Trachinotus anak</i>), an important marine aquaculture species. HiFi, ONT ultra-long and Hi-C sequencing data were used to generate two gap-free chromosome-level haplotypes with complete telomere coverage. This assembly provides a valuable genomic resource for studying sex determination, adaptive evolution, and molecular breeding in <i>T. anak </i>and related Carangidae species.
DOI: 10.6084/m9.figshare.29526377.v3
title: Telomere-to-telomere haplotype-resolved genome assembly and annotation of a female oyster pompano (<i>Trachinotus anak</i>)

description: We report a telomere-to-telomere (T2T), haplotype-resolved genome assembly of a female oyster pompano (<i>Trachinotus anak</i>), an important marine aquaculture species. HiFi, ONT ultra-long and Hi-C sequencing data were used to generate two gap-free chromosome-level haplotypes with complete telomere coverage. This assembly provides a valuable genomic resource for studying sex determination, adaptive evolution, and molecular breeding in <i>T. anak </i>and related Carangidae species.
DOI: 10.15468/dl.2er3f5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cuculiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-130 -10,-120 -10,-120 0,-130 0,-130 -10))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022718-251009101135966/datasets/export for details.
DOI: 10.15468/dl.6kg3gc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pelecaniformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((140 -70,150 -70,150 -60,140 -60,140 -70))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022719-251009101135966/datasets/export for details.
DOI: 10.15468/dl.uuyw4n
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cuculiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-120 -10,-110 -10,-110 0,-120 0,-120 -10))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022717-251009101135966/datasets/export for details.
DOI: 10.15468/dl.r42jdx
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rubus gratus",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 110 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022721-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3kdp4h
title: Occurrence Download

description: A dataset containing 16480 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Adiantum aleuticum"
 ]
}

 The dataset includes 16480 records from 171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022720-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17351737
title: PLANET4B Systemic Interventions Dataset Pisa [UNIPI] 20251014 v1

description: This dataset includes the data and files used to identify leverage points and systemic interventions to better prioritise biodiversity in the textile, apparel, and fashion sector in the Fashion case study of the Horizon Europe project PLANET4B (understanding Plural values, intersectionality, Leverage points, Attitudes, Norms, behaviour and social lEarning in Transformation for Biodiversity decision making). More specifically, it includes workshop transcripts (N=4), and processed data (N=3). Additionally, the dataset includes a metada document (PLANET4B_Metadata-SystemicInterventions_Pisa_20251014_metadata.docx) with additional information about each of the files.

At the time of collection, all the contributors were researchers at the University of Pisa (UNIPI). The case study focused on understanding the relation between biodiversity loss and the textile, apparel, and fashion sector (TAF), and identifying leverage points and potential interventions to foster transformative change for biodiversity in the sector.
DOI: 10.5281/zenodo.17351738
title: PLANET4B Systemic Interventions Dataset Pisa [UNIPI] 20251014 v1

description: This dataset includes the data and files used to identify leverage points and systemic interventions to better prioritise biodiversity in the textile, apparel, and fashion sector in the Fashion case study of the Horizon Europe project PLANET4B (understanding Plural values, intersectionality, Leverage points, Attitudes, Norms, behaviour and social lEarning in Transformation for Biodiversity decision making). More specifically, it includes workshop transcripts (N=4), and processed data (N=3). Additionally, the dataset includes a metada document (PLANET4B_Metadata-SystemicInterventions_Pisa_20251014_metadata.docx) with additional information about each of the files.

At the time of collection, all the contributors were researchers at the University of Pisa (UNIPI). The case study focused on understanding the relation between biodiversity loss and the textile, apparel, and fashion sector (TAF), and identifying leverage points and potential interventions to foster transformative change for biodiversity in the sector.
DOI: 10.15468/dl.5bey89
title: Occurrence Download

description: A dataset containing 1663 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cuculiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-20 0,-10 0,-10 10,-20 10,-20 0))"
 ]
}

 The dataset includes 1663 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022723-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7qdn4d
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pelecaniformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-30 -90,-20 -90,-20 -80,-30 -80,-30 -90))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022725-251009101135966/datasets/export for details.
DOI: 10.15468/dl.nb3f2e
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pelecaniformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-40 -90,-30 -90,-30 -80,-40 -80,-40 -90))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022724-251009101135966/datasets/export for details.
DOI: 10.5281/zenodo.15970399
title: PLANET4B Exploratory Interviews Dataset Pisa [UNIPI] 20250716 v2

description: This dataset includes the anonymised transcripts of the interviews (N=12) conducted during the exploratory phase (EP) of the Fashion case study in the Horizon Europe project PLANET4B (understanding Plural values, intersectionality, Leverage points, Attitudes, Norms, behaviour and social lEarning in Transformation for Biodiversity decision making). Additionally, the dataset includes a metada document (PLANET4B_Metadata-Exploratory-Interviews_Pisa_20250716_metadata.docx) with additional information about each of the transcripts (e.g., date, location, thematic focus, sector of the interviewees). The new version (v2) includes the same content with changes in the naming of the files and the adapted metadata.  

At the time of collection, all the contributors were researchers at the University of Pisa (UNIPI). The case study focused on understanding the relation between biodiversity loss and the textile, apparel, and fashion sector (TAF), and identifying leverage points and potential interventions to foster transformative change for biodiversity in the sector.
DOI: 10.5281/zenodo.17356420
title: PLANET4B Exploratory Interviews Dataset Pisa [UNIPI] 20250716 v2

description: This dataset includes the anonymised transcripts of the interviews (N=12) conducted during the exploratory phase (EP) of the Fashion case study in the Horizon Europe project PLANET4B (understanding Plural values, intersectionality, Leverage points, Attitudes, Norms, behaviour and social lEarning in Transformation for Biodiversity decision making). Additionally, the dataset includes a metada document (PLANET4B_Metadata-Exploratory-Interviews_Pisa_20250716_metadata.docx) with additional information about each of the transcripts (e.g., date, location, thematic focus, sector of the interviewees). The new version (v2) includes the same content with changes in the naming of the files and the adapted metadata.  

At the time of collection, all the contributors were researchers at the University of Pisa (UNIPI). The case study focused on understanding the relation between biodiversity loss and the textile, apparel, and fashion sector (TAF), and identifying leverage points and potential interventions to foster transformative change for biodiversity in the sector.
DOI: 10.15468/dl.8umrev
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rubus lasiandrus",
 "Country is Sweden",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022726-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17338236
title: FOCCUS WP9 MS9.1 Applications prototype: ESC1 - 1.1.1 -  Land-based pollution and eutrophication in the North Sea

description: Overview: 

This Zenodo item contains example output derived from coastal application 1.1.1 (See FOCCUS D8.1), as proof of prototype development. The figure is an example output expected from the prototype coastal application, whereas the dataset contains the information in the figure. 

Figure description: 

The figure (mesh2d_Chlfa.png) contains an example output, where the mean chlorphyll-a concentration over the growing season in 2015 for the various OSPAR regions is shown. All results shown are preliminary and no rights should be attributed to them. The various OSPAR regions are shown in OSPAR_Overview.png. 

The figure (EQ_chl.png) contains an example output, where the Ecological Quality Ratio is calculated according to the OSPAR COMPEAT procedure, for the Chlorphyll results. All results shown are preliminary and no rights should be attributed to them. 

Dataset(s) description: 

The dataset, (FOCCUS_OSP_ESC1_2015_growingseasonmean_chlorophylla.nc) is an xarray dataset, containing the data generated and visualized in the background of the mesh2d_Chlfa.png. All results shown are preliminary and no rights should be attributed to them. 

The dataset (EQR_ChlfA.csv) is a .csv, containing the geodataframe and associated values used for visualization of the Ecological Quality Ratio.
DOI: 10.5281/zenodo.17338237
title: FOCCUS WP9 MS9.1 Applications prototype: ESC1 - 1.1.1 -  Land-based pollution and eutrophication in the North Sea

description: Overview: 

This Zenodo item contains example output derived from coastal application 1.1.1 (See FOCCUS D8.1), as proof of prototype development. The figure is an example output expected from the prototype coastal application, whereas the dataset contains the information in the figure. 

Figure description: 

The figure (mesh2d_Chlfa.png) contains an example output, where the mean chlorphyll-a concentration over the growing season in 2015 for the various OSPAR regions is shown. All results shown are preliminary and no rights should be attributed to them. The various OSPAR regions are shown in OSPAR_Overview.png. 

The figure (EQ_chl.png) contains an example output, where the Ecological Quality Ratio is calculated according to the OSPAR COMPEAT procedure, for the Chlorphyll results. All results shown are preliminary and no rights should be attributed to them. 

Dataset(s) description: 

The dataset, (FOCCUS_OSP_ESC1_2015_growingseasonmean_chlorophylla.nc) is an xarray dataset, containing the data generated and visualized in the background of the mesh2d_Chlfa.png. All results shown are preliminary and no rights should be attributed to them. 

The dataset (EQR_ChlfA.csv) is a .csv, containing the geodataframe and associated values used for visualization of the Ecological Quality Ratio.
DOI: 10.5281/zenodo.17338067
title: FOCCUS WP9 MS9.1 Applications prototype: ESC2 - 2.1.3 -  Impact Assessment for multi-use in the Southern North Sea

description: Overview: 

This Zenodo item contains example output derived from coastal application 2.1.3 (See FOCCUS D8.1), as proof of prototype development. The figure is an example output expected from the final coastal application, wheras the dataset contains the information in the figure. 

Figure description: 

The figure (BedShearStress_dif_29012015.png) contains the absolute difference in bed shear stress magnitude between a model simulation (Delft3D-FM, Dutch Continental Shelf Model) without multi-use, and one scenario with multi-use (offshore wind farms and aquaculture). The difference was visualized at one specific moment in the simulation, namely 29-01-2015 00:00. All results shown are preliminary and no rights should be attributed to them. 

Dataset description: 

The dataset, (dif_mesh2d_taus_2015-01-29.nc) is an xarray dataset, containing the difference data generated and visualized in the background of the figure. The difference was visualized at one specific moment in the simulation, namely 29-01-2015 00:00. All results shown are preliminary and no rights should be attributed to them.
DOI: 10.5281/zenodo.17338068
title: FOCCUS WP9 MS9.1 Applications prototype: ESC2 - 2.1.3 -  Impact Assessment for multi-use in the Southern North Sea

description: Overview: 

This Zenodo item contains example output derived from coastal application 2.1.3 (See FOCCUS D8.1), as proof of prototype development. The figure is an example output expected from the final coastal application, wheras the dataset contains the information in the figure. 

Figure description: 

The figure (BedShearStress_dif_29012015.png) contains the absolute difference in bed shear stress magnitude between a model simulation (Delft3D-FM, Dutch Continental Shelf Model) without multi-use, and one scenario with multi-use (offshore wind farms and aquaculture). The difference was visualized at one specific moment in the simulation, namely 29-01-2015 00:00. All results shown are preliminary and no rights should be attributed to them. 

Dataset description: 

The dataset, (dif_mesh2d_taus_2015-01-29.nc) is an xarray dataset, containing the difference data generated and visualized in the background of the figure. The difference was visualized at one specific moment in the simulation, namely 29-01-2015 00:00. All results shown are preliminary and no rights should be attributed to them.
DOI: 10.15468/dl.bd9c6t
title: Occurrence Download

description: A dataset containing 8369 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Adiantum raddianum"
 ]
}

 The dataset includes 8369 records from 351 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022727-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13390325
title: Catalog of Letters Sent to LM
DOI: 10.5281/zenodo.15389301
title: Supplementary Material - Spiders in the Mosaic

description: Supplementary Material for the article "Spiders in the Mosaic: How habitat heterogeneity and structure drives local spider diversity in a Mediterranean forest. " By Manuel Marquerie-Córdoba et al. 

Sent to publication to Ecological Entomology

List of contents:

Supplementary 1 – Final checklist  

Supplementary 2 - Diversity analysis extra statistics 

Supplementary 3 – Extra GLMMs of spider diversity against different environmental variables.
DOI: 10.5281/zenodo.17356343
title: Supplementary Material - Spiders in the Mosaic

description: Supplementary Material for the article "Spiders in the Mosaic: How habitat heterogeneity and structure drives local spider diversity in a Mediterranean forest. " By Manuel Marquerie-Córdoba et al. 

Sent to publication to Ecological Entomology

List of contents:

Supplementary 1 – Final checklist  

Supplementary 2 - Diversity analysis extra statistics 

Supplementary 3 – Extra GLMMs of spider diversity against different environmental variables.
DOI: 10.15468/dl.x6esxz
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cuculiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-160 10,-150 10,-150 20,-160 20,-160 10))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022729-251009101135966/datasets/export for details.
DOI: 10.15468/dl.8eeun9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cuculiformes)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((-170 10,-160 10,-160 20,-170 20,-170 10))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022732-251009101135966/datasets/export for details.