cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30609100
title: First identification of concurrent infections with novel emerging duck astrovirus and duck hepatitis A virus type 3 (DHAV-3) in ducklings in Egypt using metagenomic next-generation sequencing (m-NGS)

description: Among RNA viruses, duck hepatitis A viruses (DHAVs) and duck astroviruses (DAstVs) are significant viral pathogens causing duck viral hepatitis (DVH), leading to severe economic losses in the duck industry worldwide. In August 2021, an acute and highly fatal disease affected 2-week-old Pekin ducklings on a commercial farm in Gharbia, Egypt. The ducklings displayed signs of lethargy, ataxia, and opisthotonus, accompanied by visible lesions in the liver and kidneys, as well as histopathological evidence of hepatocellular necrosis, inflammation, and degeneration of renal tubules. RT–PCR confirmed the presence of DHAV-3 but not DHAV-1. Virus isolation trials in embryonated duck eggs showed greenish allantoic fluid discolouration and embryonic deaths within 72 h. Experimental infections reproduced clinical signs and acute hepatitis in 1-week-old ducklings. Next-generation sequencing (NGS) revealed the complete genome of the DHAV-3 isolate, Du/Egy/Gharbia/2021/DHAV-3, representing the first complete genome sequencing and molecular characterization of a DHAV-3 strain from Egypt. Phylogenetic analysis revealed a high genetic similarity (92.5%) between the Egyptian DHAV-3 isolate and strains originating from China, Vietnam, and South Korea. Unexpectedly, virome sequencing identified a novel duck astrovirus, Du/Egy/Gharbia/2021/DAstV, exhibiting 93.24% nucleotide identity with the DAstV-5 JM strain from China and approximately 75% identity with other duck astroviruses. This is the first report of DAstV-5 co-infection with DHAV-3 in Egypt, highlighting the power of metagenomic approaches to detect novel pathogens. The findings expand our understanding of the molecular epidemiology and evolution of these viruses, emphasizing the need for continued surveillance and control measures in the duck industry. First complete genome sequencing of a DHAV-3 strain from Egypt using m-NGS.Discovery of a novel duck astrovirus co-infecting with DHAV-3.Phylogenetic analysis reveals cross-border transmission links with Asian strains of both DHAV-3 and DAstV-5. First complete genome sequencing of a DHAV-3 strain from Egypt using m-NGS. Discovery of a novel duck astrovirus co-infecting with DHAV-3. Phylogenetic analysis reveals cross-border transmission links with Asian strains of both DHAV-3 and DAstV-5.
DOI: 10.6084/m9.figshare.30609100.v1
title: First identification of concurrent infections with novel emerging duck astrovirus and duck hepatitis A virus type 3 (DHAV-3) in ducklings in Egypt using metagenomic next-generation sequencing (m-NGS)

description: Among RNA viruses, duck hepatitis A viruses (DHAVs) and duck astroviruses (DAstVs) are significant viral pathogens causing duck viral hepatitis (DVH), leading to severe economic losses in the duck industry worldwide. In August 2021, an acute and highly fatal disease affected 2-week-old Pekin ducklings on a commercial farm in Gharbia, Egypt. The ducklings displayed signs of lethargy, ataxia, and opisthotonus, accompanied by visible lesions in the liver and kidneys, as well as histopathological evidence of hepatocellular necrosis, inflammation, and degeneration of renal tubules. RT–PCR confirmed the presence of DHAV-3 but not DHAV-1. Virus isolation trials in embryonated duck eggs showed greenish allantoic fluid discolouration and embryonic deaths within 72 h. Experimental infections reproduced clinical signs and acute hepatitis in 1-week-old ducklings. Next-generation sequencing (NGS) revealed the complete genome of the DHAV-3 isolate, Du/Egy/Gharbia/2021/DHAV-3, representing the first complete genome sequencing and molecular characterization of a DHAV-3 strain from Egypt. Phylogenetic analysis revealed a high genetic similarity (92.5%) between the Egyptian DHAV-3 isolate and strains originating from China, Vietnam, and South Korea. Unexpectedly, virome sequencing identified a novel duck astrovirus, Du/Egy/Gharbia/2021/DAstV, exhibiting 93.24% nucleotide identity with the DAstV-5 JM strain from China and approximately 75% identity with other duck astroviruses. This is the first report of DAstV-5 co-infection with DHAV-3 in Egypt, highlighting the power of metagenomic approaches to detect novel pathogens. The findings expand our understanding of the molecular epidemiology and evolution of these viruses, emphasizing the need for continued surveillance and control measures in the duck industry. First complete genome sequencing of a DHAV-3 strain from Egypt using m-NGS.Discovery of a novel duck astrovirus co-infecting with DHAV-3.Phylogenetic analysis reveals cross-border transmission links with Asian strains of both DHAV-3 and DAstV-5. First complete genome sequencing of a DHAV-3 strain from Egypt using m-NGS. Discovery of a novel duck astrovirus co-infecting with DHAV-3. Phylogenetic analysis reveals cross-border transmission links with Asian strains of both DHAV-3 and DAstV-5.
DOI: 10.15468/dl.f8p3kq
title: Occurrence Download

description: A dataset containing 183 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Malaysia, Brunei Darussalam)",
 "Geometry POLYGON((108.61402 0.04167,113.01649 1.30783,115.97815 1.26782,119.0959 1.87837,119.05988 5.46199,117.01874 7.80733,112.8564 6.47385,100.22906 8.48928,100.08498 2.41526,103.17782 1.20636,108.61402 1.87837,108.61402 0.04167))",
 "HasGeospatialIssue is false",
 "TaxonKey is Phyllocladus"
 ]
}

 The dataset includes 183 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030602-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17249644
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Serbia

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_RS: Veterinary Directorate - Ministry of Agriculture and Environmental Protection (MPZZS)

TSE_2023_RS: Veterinary Directorate - Ministry of Agriculture and Environmental Protection (MPZZS)

TSE_2022_RS: Veterinary Directorate - Ministry of Agriculture and Environmental Protection (MPZZS)

TSE_2021_RS: Veterinary Directorate - Ministry of Agriculture and Environmental Protection (MPZZS)

TSE_2020_RS: Veterinary Directorate - Ministry of Agriculture and Environmental Protection (MPZZS)

TSE_2019_RS: Veterinary Directorate - Ministry of Agriculture and Environmental Protection (MPZZS)
description: RS; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.4091729
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Serbia

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_RS: Veterinary Directorate - Ministry of Agriculture and Environmental Protection (MPZZS)

TSE_2023_RS: Veterinary Directorate - Ministry of Agriculture and Environmental Protection (MPZZS)

TSE_2022_RS: Veterinary Directorate - Ministry of Agriculture and Environmental Protection (MPZZS)

TSE_2021_RS: Veterinary Directorate - Ministry of Agriculture and Environmental Protection (MPZZS)

TSE_2020_RS: Veterinary Directorate - Ministry of Agriculture and Environmental Protection (MPZZS)

TSE_2019_RS: Veterinary Directorate - Ministry of Agriculture and Environmental Protection (MPZZS)
description: RS; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.17249637
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Norway

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_NO: Norwegian Veterinary Institute (NVI)

TSE_2023_NO: Norwegian Veterinary Institute (NVI)

TSE_2022_NO: Norwegian Veterinary Institute (NVI)

TSE_2021_NO: Norwegian Veterinary Institute (NVI)

TSE_2020_NO: Norwegian Veterinary Institute (NVI)

TSE_2019_NO: Norwegian Veterinary Institute (NVI)
description: NO; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.4091727
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Norway

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_NO: Norwegian Veterinary Institute (NVI)

TSE_2023_NO: Norwegian Veterinary Institute (NVI)

TSE_2022_NO: Norwegian Veterinary Institute (NVI)

TSE_2021_NO: Norwegian Veterinary Institute (NVI)

TSE_2020_NO: Norwegian Veterinary Institute (NVI)

TSE_2019_NO: Norwegian Veterinary Institute (NVI)
description: NO; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.15468/uyo5za
title: AWI-Herbarium Marine Macroalgae

description: The AWI Herbarium Marine Macroalgae (BRM) is a reference herbarium for seaweeds of the German North Sea coast. It is located on the island of Helgoland and is accessible to interested scientists. It hosts the collection of marine macroalgae from the German North Sea with their original taxon names, established by P. Kuckuck in 1892 and continued by P. Kornmann and H.-P. Sahling after the 2nd World War. The database contains approx. 8600 entries from ≥ 240 taxa and covers most specimens conserved by P. Kuckuck, P. Kornmann and H.-P. Sahling and others between 1861 and 2006. For many species a representative image is available (444 images). In total, the herbarium contains 4 types and 2 isotypes. More recent collections are not yet digitized.
DOI: 10.5281/zenodo.17249631
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - North Macedonia

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_MK: Food and Veterinary Agency (FVA)

TSE_2023_MK: Food and Veterinary Agency (FVA)

TSE_2022_MK: Food and Veterinary Agency (FVA)

TSE_2021_MK: Food and Veterinary Agency (FVA)

TSE_2020_MK: Food and Veterinary Agency (FVA)

TSE_2019_MK: Food and Veterinary Agency (FVA)
description: MK; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.4091725
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - North Macedonia

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_MK: Food and Veterinary Agency (FVA)

TSE_2023_MK: Food and Veterinary Agency (FVA)

TSE_2022_MK: Food and Veterinary Agency (FVA)

TSE_2021_MK: Food and Veterinary Agency (FVA)

TSE_2020_MK: Food and Veterinary Agency (FVA)

TSE_2019_MK: Food and Veterinary Agency (FVA)
description: MK; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.17249628
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Montenegro

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_ME: Diagnostic Veterinary Laboratory (VetLab)

TSE_2023_ME: Diagnostic Veterinary Laboratory (VetLab)

TSE_2022_ME: Diagnostic Veterinary Laboratory (VetLab)

TSE_2021_ME: Diagnostic Veterinary Laboratory (VetLab)

TSE_2020_ME: Diagnostic Veterinary Laboratory (VetLab)

TSE_2019_ME: Diagnostic Veterinary Laboratory (VetLab)
description: ME; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.4091723
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Montenegro

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_ME: Diagnostic Veterinary Laboratory (VetLab)

TSE_2023_ME: Diagnostic Veterinary Laboratory (VetLab)

TSE_2022_ME: Diagnostic Veterinary Laboratory (VetLab)

TSE_2021_ME: Diagnostic Veterinary Laboratory (VetLab)

TSE_2020_ME: Diagnostic Veterinary Laboratory (VetLab)

TSE_2019_ME: Diagnostic Veterinary Laboratory (VetLab)
description: ME; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.17249618
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Iceland

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_IS: Icelandic Food and Veterinary Authority (MAST)

TSE_2023_IS: Icelandic Food and Veterinary Authority (MAST)

TSE_2022_IS: Icelandic Food and Veterinary Authority (MAST)

TSE_2021_IS: Icelandic Food and Veterinary Authority (MAST)

TSE_2020_IS: Icelandic Food and Veterinary Authority (MAST)

TSE_2019_IS: Icelandic Food and Veterinary Authority (MAST)
description: IS; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.4091719
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Iceland

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_IS: Icelandic Food and Veterinary Authority (MAST)

TSE_2023_IS: Icelandic Food and Veterinary Authority (MAST)

TSE_2022_IS: Icelandic Food and Veterinary Authority (MAST)

TSE_2021_IS: Icelandic Food and Veterinary Authority (MAST)

TSE_2020_IS: Icelandic Food and Veterinary Authority (MAST)

TSE_2019_IS: Icelandic Food and Veterinary Authority (MAST)
description: IS; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.15468/dl.sekmz2
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Pleioblastus maculatus"
 ]
}

 The dataset includes 129 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030604-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16874898
title: Saarbruecken Voice Database

description: The Saarbrücken Voice Database is a collection of German speech recordings used for research in the fields of phonetics, speech pathology, and computer-assisted speech analysis. The dataset includes so-called “normal” and pathological speech samples recorded under controlled conditions.

If you need to convert the .nsp files to .wav files, you can find a conversion tool here.
DOI: 10.5281/zenodo.16258834
title: Saarbruecken Voice Database

description: The Saarbrücken Voice Database is a collection of German speech recordings used for research in the fields of phonetics, speech pathology, and computer-assisted speech analysis. The dataset includes so-called “normal” and pathological speech samples recorded under controlled conditions.

If you need to convert the .nsp files to .wav files, you can find a conversion tool here.
DOI: 10.5281/zenodo.17249600
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Switzerland

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_CH: Federal Food Safety and Veterinary Office (FSVO)

TSE_2023_CH: Federal Food Safety and Veterinary Office (FSVO)

TSE_2022_CH: Federal Food Safety and Veterinary Office (FSVO)

TSE_2021_CH: Federal Food Safety and Veterinary Office (FSVO)

TSE_2020_CH: Federal Food Safety and Veterinary Office (FSVO)

TSE_2019_CH: Federal Food Safety and Veterinary Office (FSVO)
description: CH; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.4091716
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Switzerland

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_CH: Federal Food Safety and Veterinary Office (FSVO)

TSE_2023_CH: Federal Food Safety and Veterinary Office (FSVO)

TSE_2022_CH: Federal Food Safety and Veterinary Office (FSVO)

TSE_2021_CH: Federal Food Safety and Veterinary Office (FSVO)

TSE_2020_CH: Federal Food Safety and Veterinary Office (FSVO)

TSE_2019_CH: Federal Food Safety and Veterinary Office (FSVO)
description: CH; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.17249597
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Bosnia and Herzegovina

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)

TSE_2023_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)

TSE_2022_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)

TSE_2021_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)

TSE_2020_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)


For Bosnia and Herzegovina, 2020 is the first year reporting TSE surveillance results.
description: BA; en, CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.5652824
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Bosnia and Herzegovina

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)

TSE_2023_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)

TSE_2022_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)

TSE_2021_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)

TSE_2020_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)


For Bosnia and Herzegovina, 2020 is the first year reporting TSE surveillance results.
description: BA; en, CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5517/cc5kg7d
title: CCDC 165733: Experimental Crystal Structure Determination

description: Related Article: K.Hiratani, M.Goto, Y.Nagawa, K.Kasuga, K.Fujiwara|2000|Chem.Lett.|29|1364|doi:10.1246/cl.2000.1364
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.73qyxt
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Chimonobambusa convoluta"
 ]
}

 The dataset includes 13 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030605-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16980698
title: Human Experience in Regulated Offices (HERO) dataset
title: MuSIC_IRP1_HERO

description: MuSIC_IRP1_HERO







Summary

The Human Experience in Regulated Offices (HERO) dataset is multimodal dataset collection of physiological, environmental, behavioral, and perceptual measures during realistic office‑like activities in controlled indoor exposure. Twenty‑four participants completed standardized work tasks while wearing an EmotiBit sensor suite that recorded continuous physiological signals—including electrodermal activity, photoplethysmography, skin temperature, and three‑axis motion—providing rich insight into autonomic and motor responses. Although environmental measurements (ambient temperature, humidity) and perception surveys (baseline and task‑specific ratings) are planned for future releases, the current release captures two experimental conditions: a high‑temperature session and a low‑temperature session, enabling direct comparison of physiological dynamics across thermal extremes. By linking fine‑grained biometric data with controlled task performance, HERO supports research in affective computing, thermal comfort modeling, and adaptive building control, laying groundwork for data‑driven strategies that enhance occupant well‑being and productivity in climate‑responsive office spaces.
DOI: 10.5281/zenodo.17249588
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - United Kingdom in respect of Northern Ireland

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_XI - Department of Agriculture, Environment and Rural Affairs

TSE_2023_XI - Department of Agriculture, Environment and Rural Affairs

TSE_2022_XI - Department of Agriculture, Environment and Rural Affairs

TSE_2021_XI - Department of Agriculture, Environment and Rural Affairs


 
description: XI; en; CSV; zoonoses_support@efsa.europa.eu
DOI: 10.5281/zenodo.7257655
title: Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - United Kingdom in respect of Northern Ireland

description: This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.

Reporting authorities contributing to each data collection:



TSE_2024_XI - Department of Agriculture, Environment and Rural Affairs

TSE_2023_XI - Department of Agriculture, Environment and Rural Affairs

TSE_2022_XI - Department of Agriculture, Environment and Rural Affairs

TSE_2021_XI - Department of Agriculture, Environment and Rural Affairs


 
description: XI; en; CSV; zoonoses_support@efsa.europa.eu