cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c5wp9tj1g
title: MassIVE MSV000094120 - Major facilitator family transporters specifically enhance caffeyl alcohol uptake during C-lignin biosynthesis in Cleome hassleriana
title: Here we address whether monolignol transporters are involved in the process of C-lignin production in the seed coat of Cleome. By interrogating expression data from transcriptome and proteome analyses of seed coat material during development, coupled with uptake and efflux assays using a yeast expression system, we identified two major facilitators of caffeyl alcohol transport, annotated as a polyol and a sucrose transporter respectively. Gain of function studies support the ability of these transporters to facilitate caffeyl alcohol transport in planta. These results are discussed in relation to the balance between G and C-lignin accumulation in the Cleome seed coat, and the evolution of C-lignin formation across the plant kingdom.
DOI: 10.34740/kaggle/dsv/7658682
title: Trending Youtube Video Statistics (113 Countries)
DOI: 10.6084/m9.figshare.25246000
title: RARg.K27.veh.bw

description: CUT&RUN for H3K27ac in 22Rv1 cells with stable expression of RARgamma and treated with vehicle
DOI: 10.6084/m9.figshare.25246000.v1
title: RARg.K27.veh.bw

description: CUT&RUN for H3K27ac in 22Rv1 cells with stable expression of RARgamma and treated with vehicle
DOI: 10.5281/zenodo.10680942
title: Differential gene expression analysis of Serritaenia testaceovaginata (Zygnematophyceae) treated with ultraviolet radiation
DOI: 10.5281/zenodo.10680943
title: Differential gene expression analysis of Serritaenia testaceovaginata (Zygnematophyceae) treated with ultraviolet radiation
DOI: 10.5281/zenodo.10474167
title: Data and code for Species-wide quantitative transcriptomes and proteomes reveal distinct genetic control of gene expression variation in yeast

description: This repository contains the codes to perform the analysis and the figure for the "Species-wide quantitative transcriptomes and proteomes reveal distinct genetic control of gene expression variation in yeast" paper. 

The analysis were performed using R and can be achieved using the analysis_and_figure.R file.

All the data required to run this code are available with the data_upload.zip archive.
DOI: 10.5281/zenodo.10474166
title: Data and code for Species-wide quantitative transcriptomes and proteomes reveal distinct genetic control of gene expression variation in yeast

description: This repository contains the codes to perform the analysis and the figure for the "Species-wide quantitative transcriptomes and proteomes reveal distinct genetic control of gene expression variation in yeast" paper. 

The analysis were performed using R and can be achieved using the analysis_and_figure.R file.

All the data required to run this code are available with the data_upload.zip archive.
DOI: 10.5281/zenodo.10567083
title: Data and code for Species-wide quantitative transcriptomes and proteomes reveal distinct genetic control of gene expression variation in yeast

description: This repository contains the codes to perform the analysis and the figure for the "Species-wide quantitative transcriptomes and proteomes reveal distinct genetic control of gene expression variation in yeast" paper. 

The analysis were performed using R and can be achieved using the analysis_and_figure.R file.

All the data required to run this code are available with the data_upload.zip archive.
DOI: 10.6084/m9.figshare.25246036.v1
title: CoPixie-Beads.zip

description: Dataset for CoPixie.
DOI: 10.6084/m9.figshare.25246036
title: CoPixie-Beads.zip

description: Dataset for CoPixie.
DOI: 10.18112/openneuro.ds004977.v1.0.0
title: CARLA: Adjusted common average referencing for cortico-cortical evoked potential data
DOI: 10.6073/pasta/91c112c13f01076c04ee5f2a8d90d7d9
title: Physical and microbial processing of dissolved organic nitrogen (DON) (Salinity Experiment) along an oligotrophic marsh/mangrove/estuary ecotone (Taylor Slough and Florida Bay) for August 2003 in Everglades National Park (FCE), South Florida, USA

description: A better understanding of the biogeochemical cycling of nutrients entering Florida Bay is a key issue regarding the restoration of the Everglades. In addition to precipitation, the other major source of freshwater to Florida Bay is from Taylor Slough and the C-111 Basin in the northeast section of the Bay. While it is known that these areas deliver significant amounts of N to the Bay, a significant portion of this is in the form of dissolved organic N (DON). The sources, environmental fate and bioavailability to microorganisms of this DON are however, not known. Should this DON be readily available, any increased load as a function of restoration changes might have an impact on internal phytoplankton bloom dynamics. No significant flocculation or precipitation of DOM occurred with increase in salinity, meaning that terrestrial DOM does not get trapped in the sediments but stays in the water column where it subjected to photolysis and advective transport. Sunlight has a significant effect on the chemical characteristics of DOM. While the DOC levels did not change significantly during photo-exposure, the optical characteristics of the DOM were modified. The environmental implications of this are conflicting: photo-induced polymerization may stabilize the DOM by reducing its bioavailability while photolysis may make the DOM more labile. Overall, DON bioavailability was relatively low in this region. Even though the amount of DON loaded to the bay may be significant, the fraction of DON available for microbial cycling is much smaller. The amount of N supplied by recycling may be a significant portion of the total DIN pool. All this must be considered in context with the proposed CERP modifications to flows. As of the latest initial Comprehensive Everglades Restoration Project (CERP) update, the flows to Taylor Slough and C-111/Panhandle Basis are not predicted to change very much from base conditions. Therefore we do not expect any great increases in TN loading in this region. In contrast, the proposed flow increases to the Shark River Slough are large and may have significant effects on transport of DOM to the Southwest Florida Shelf. We believe that future efforts in DON characterization and bioavailability should be concentrated in this area.
DOI: 10.18112/openneuro.ds004977.v1.1.0
title: CARLA: Adjusted common average referencing for cortico-cortical evoked potential data
DOI: 10.18112/openneuro.ds004977.v1.1.1
title: CARLA: Adjusted common average referencing for cortico-cortical evoked potential data
DOI: 10.6084/m9.figshare.25246009
title: 02_3p5K_MP_2p4to420uW.txt

description: Power dependent photoluminescence data in WSe2/WS2 system
DOI: 10.6084/m9.figshare.25246009.v1
title: 02_3p5K_MP_2p4to420uW.txt

description: Power dependent photoluminescence data in WSe2/WS2 system
DOI: 10.6084/m9.figshare.25246006
title: 01_3p5K_LP_16nWto3uW.txt

description: Power-dependent photoluminescence data in WSe2/WS2 system
DOI: 10.6084/m9.figshare.25246006.v1
title: 01_3p5K_LP_16nWto3uW.txt

description: Power-dependent photoluminescence data in WSe2/WS2 system
DOI: 10.6084/m9.figshare.25246012.v1
title: 03_3p5K_HP_375uWto69mW.txt

description: Power-dependent photoluminescence data in WSe2/WS2 system
DOI: 10.6084/m9.figshare.25246012
title: 03_3p5K_HP_375uWto69mW.txt

description: Power-dependent photoluminescence data in WSe2/WS2 system
DOI: 10.6084/m9.figshare.25201673.v2
title: deepn4_model_weights

description: The model weights for correcting the bias field in T1w
DOI: 10.5063/f1tb15cq
title: Gbif observations of 3 native and 1 highly invasive annual plant species across drylands in Southern California

description: Gbif data were collected for dryland ecosystems in Southern California. 3 native and 1 highly invasive annual plant species were selected, with all reported observations extracted. WorldClim data was joined to each independent observation to display the range of temperatures and conditions which each observed species can be observed.
DOI: 10.5281/zenodo.10680976
title: African dust with bioaerosols

description: This data set is from WIBS measurements made in 2020 on the island of Puerto Rico
DOI: 10.6073/pasta/53f807be5a752656b6e16cc4629a7070
title: Hubbard Brook Experimental Forest: Annual measurements on marked northern red oak seedlings, 2014-ongoing

description: Marked individual northern red oak seedlings were individually marked and mapped at 20 valleywide transects starting in summer 2011. This data set includes detailed seedling measures starting in summer 2014. The data were used to examine the impact of previous year seedling condition on whether the seedling survived in the next season.
DOI: 10.34740/kaggle/dsv/7658798
title: Daily Public Opinion on Israel-Palestine War
DOI: 10.5281/zenodo.8256532
title: IODP Expedition 382 Alkalinity and pH

description: Alkalinity was determined by Gran titration with an autotitrator (Metrohm 794 basic Titrino) using 0.1 M HCl at 20 degrees C. Report includes alkalinity, correction factor (if applicable), and pH.
DOI: 10.5281/zenodo.8256533
title: IODP Expedition 382 Alkalinity and pH

description: Alkalinity was determined by Gran titration with an autotitrator (Metrohm 794 basic Titrino) using 0.1 M HCl at 20 degrees C. Report includes alkalinity, correction factor (if applicable), and pH.
DOI: 10.5281/zenodo.8256541
title: IODP Expedition 382 Carbonates composite report

description: This composite report includes data from two analyses (total carbon from Elemental analysis [CHNS], and inorganic carbon from [Coulometer]). Each row combines the  CHNS and Coulometer data from measurements made on the same sample at the same time for a particular section and section offset (depth). If data do not exist for a particular expedition, the column does not appear. To identify individual samples and tests, see each separate data type (Elemental analysis and Coulometer). If the same sample was measured multiple times by any of the methods, results in the report will be combined on one line where possible. Each additional replicate result will be shown in subsequent rows and will be combined where possible. Report includes results for carbon forms: total, inorganic, calcium carbonate, and organic by difference, along with total hydrogen, nitrogen, and sulfur.
DOI: 10.5281/zenodo.8256542
title: IODP Expedition 382 Carbonates composite report

description: This composite report includes data from two analyses (total carbon from Elemental analysis [CHNS], and inorganic carbon from [Coulometer]). Each row combines the  CHNS and Coulometer data from measurements made on the same sample at the same time for a particular section and section offset (depth). If data do not exist for a particular expedition, the column does not appear. To identify individual samples and tests, see each separate data type (Elemental analysis and Coulometer). If the same sample was measured multiple times by any of the methods, results in the report will be combined on one line where possible. Each additional replicate result will be shown in subsequent rows and will be combined where possible. Report includes results for carbon forms: total, inorganic, calcium carbonate, and organic by difference, along with total hydrogen, nitrogen, and sulfur.
DOI: 10.34740/kaggle/dsv/7658806
title: Public Opinion on Climate Change (Updated Daily)
DOI: 10.5281/zenodo.8256598
title: IODP Expedition 382 Core summary

description: Report includes detailed core data: drilling and coring depths, advancement, recovered core length measured on the catwalk and final curated length, core recovery, and sections cut.
DOI: 10.5281/zenodo.8256599
title: IODP Expedition 382 Core summary

description: Report includes detailed core data: drilling and coring depths, advancement, recovered core length measured on the catwalk and final curated length, core recovery, and sections cut.
DOI: 10.5281/zenodo.8256613
title: IODP Expedition 382 Micropaleontology

description: Paleontological data were collected using microscopes and recorded in the JRSO description software. All data for a species group (e.g., diatoms or nannofossils) were collected in a Microsoft Excel worksheet by hole. A zip file of the entire expedition's observations is also available.
DOI: 10.5281/zenodo.8256614
title: IODP Expedition 382 Micropaleontology

description: Paleontological data were collected using microscopes and recorded in the JRSO description software. All data for a species group (e.g., diatoms or nannofossils) were collected in a Microsoft Excel worksheet by hole. A zip file of the entire expedition's observations is also available.
DOI: 10.5281/zenodo.8256539
title: IODP Expedition 382 Elemental analysis (CHNS)

description: Fundamental elemental component (total carbon, hydrogen, nitrogen, and sulfur) fluctuations help define the origin, depositional environment, and diagenetic alteration of source materials. To determine C, H, N, and S, solid samples are reacted with a catalyst, separated by chromatography, and detected by thermal conductivity on a FlashEA 1112 CHNS elemental analyzer. Organic carbon can be directly measured on the elemental analyzer by acidification of the sample to drive off carbonate as carbon dioxide before analyzing. Total organic carbon on this report is measured rather than calculated.
DOI: 10.5281/zenodo.8256540
title: IODP Expedition 382 Elemental analysis (CHNS)

description: Fundamental elemental component (total carbon, hydrogen, nitrogen, and sulfur) fluctuations help define the origin, depositional environment, and diagenetic alteration of source materials. To determine C, H, N, and S, solid samples are reacted with a catalyst, separated by chromatography, and detected by thermal conductivity on a FlashEA 1112 CHNS elemental analyzer. Organic carbon can be directly measured on the elemental analyzer by acidification of the sample to drive off carbonate as carbon dioxide before analyzing. Total organic carbon on this report is measured rather than calculated.
DOI: 10.5281/zenodo.8256549
title: IODP Expedition 382 Closeup images

description: Close-up images taken by digital cameras as requested by the science party, typically when the section-half image is not sufficient. Close-up photographs of the areas of interest may be taken from whole-round sections, pieces, or section halves in sediments and rock.
DOI: 10.5281/zenodo.8256550
title: IODP Expedition 382 Closeup images

description: Close-up images taken by digital cameras as requested by the science party, typically when the section-half image is not sufficient. Close-up photographs of the areas of interest may be taken from whole-round sections, pieces, or section halves in sediments and rock.
DOI: 10.5281/zenodo.8256606
title: IODP Expedition 382 Stratigraphic Correlation

description: Affine and splice files created for stratigraphic correlation.
DOI: 10.5281/zenodo.8256607
title: IODP Expedition 382 Stratigraphic Correlation

description: Affine and splice files created for stratigraphic correlation.
DOI: 10.5281/zenodo.8256573
title: IODP Expedition 382 Core composite images

description: A digital composite image (PNG) is made for each core comprising core sections scanned using a line-scan camera. The composite layout is equivalent to traditional core table photos. Top left is top of core; color and meter rule references are included.
DOI: 10.5281/zenodo.8256574
title: IODP Expedition 382 Core composite images

description: A digital composite image (PNG) is made for each core comprising core sections scanned using a line-scan camera. The composite layout is equivalent to traditional core table photos. Top left is top of core; color and meter rule references are included.
DOI: 10.5281/zenodo.8256611
title: IODP Expedition 382 Inorganic carbon (coulometer)

description: Inorganic carbon (carbonate) is determined by coulometry, which uses a photodetection cell to measure carbon dioxide evolved during sample acidification. Report includes percent inorganic carbon and calcium carbonate.
DOI: 10.5281/zenodo.8256612
title: IODP Expedition 382 Inorganic carbon (coulometer)

description: Inorganic carbon (carbonate) is determined by coulometry, which uses a photodetection cell to measure carbon dioxide evolved during sample acidification. Report includes percent inorganic carbon and calcium carbonate.
DOI: 10.5281/zenodo.8256651
title: IODP Expedition 382 Hole drilling summary

description: Report includes detailed drilling data: BHA length, bit parameters, and primary depth measurements.
DOI: 10.5281/zenodo.8256652
title: IODP Expedition 382 Hole drilling summary

description: Report includes detailed drilling data: BHA length, bit parameters, and primary depth measurements.
DOI: 10.5281/zenodo.8256653
title: IODP Expedition 382 Hole summary

description: Report lists hole data: location, water depth, drilling, coring system, and core recovery.
DOI: 10.5281/zenodo.8256654
title: IODP Expedition 382 Hole summary

description: Report lists hole data: location, water depth, drilling, coring system, and core recovery.
DOI: 10.5281/zenodo.8256615
title: IODP Expedition 382 Visual core description

description: Descriptions of samples, generally at the section half and smear slide or thin section scale, were performed by shipboard scientists and recorded in the JRSO description software. Descriptive data for both macroscopic and microscopic examination were collected in a Microscoft Excel workbook by hole. A zip file of the entire expedition's observations is also available.
DOI: 10.5281/zenodo.8256616
title: IODP Expedition 382 Visual core description

description: Descriptions of samples, generally at the section half and smear slide or thin section scale, were performed by shipboard scientists and recorded in the JRSO description software. Descriptive data for both macroscopic and microscopic examination were collected in a Microscoft Excel workbook by hole. A zip file of the entire expedition's observations is also available.
DOI: 10.5281/zenodo.8256638
title: IODP Expedition 382 Formation temperature

description: Formation temperature was measured by the advanced piston corer temperature tool (APCT-3), Sediment Temperature Tool (SET), or sediment temperature pressure tool (SETP) and reduced to in situ temperature and (for SETP) pressure estimates. These data are compiled per instrument run and assigned to a core (the core cut with the APCT-3 cutting shoe or the core following the SET deployment).
DOI: 10.5281/zenodo.8256639
title: IODP Expedition 382 Formation temperature

description: Formation temperature was measured by the advanced piston corer temperature tool (APCT-3), Sediment Temperature Tool (SET), or sediment temperature pressure tool (SETP) and reduced to in situ temperature and (for SETP) pressure estimates. These data are compiled per instrument run and assigned to a core (the core cut with the APCT-3 cutting shoe or the core following the SET deployment).
DOI: 10.5281/zenodo.8257103
title: IODP Expedition 382 Interstitial water composite report

description: This composite report includes data from numerous interstitial water (IW) analyses (e.g., ICP-LIQUIDS and IONCHROM) in a variable set of columns. Each row combines the data from several tests (groups of measurements made on the same sample at the same time) for a particular IW sample. If data do not exist for a particular expedition, the column does not appear. To identify individual samples and tests, see each separate analysis (ALKALINITY, ICP-LIQUIDS, IONCHROM, SALINITY, SPEC, TITRATOR, and potentially others). Major and minor elements were determined by inductively coupled plasma-atomic emission spectrocsopy (ICP-LIQUIDS). Cations and anions were measured by ion chromatography (IONCHROM). Complex ions were measured by colorimetric measurements using a UV-VIS spectrometer (SPEC). Alkalinity and chloride was measured by titration (ALKALINITY and TITRATOR). Dissolved carbon (DC), dissolved inorganic carbon (DIC), and dissolved organic carbon (DOC) were measured by combustion in a total organic carbon (TOC) analyzer. Salinity was measured by refractometer (SALINITY). pH was measured by ion-selective electrode as part of the alkalinity procedure and is reported in the ALKALINITY analysis.
DOI: 10.5281/zenodo.8257104
title: IODP Expedition 382 Interstitial water composite report

description: This composite report includes data from numerous interstitial water (IW) analyses (e.g., ICP-LIQUIDS and IONCHROM) in a variable set of columns. Each row combines the data from several tests (groups of measurements made on the same sample at the same time) for a particular IW sample. If data do not exist for a particular expedition, the column does not appear. To identify individual samples and tests, see each separate analysis (ALKALINITY, ICP-LIQUIDS, IONCHROM, SALINITY, SPEC, TITRATOR, and potentially others). Major and minor elements were determined by inductively coupled plasma-atomic emission spectrocsopy (ICP-LIQUIDS). Cations and anions were measured by ion chromatography (IONCHROM). Complex ions were measured by colorimetric measurements using a UV-VIS spectrometer (SPEC). Alkalinity and chloride was measured by titration (ALKALINITY and TITRATOR). Dissolved carbon (DC), dissolved inorganic carbon (DIC), and dissolved organic carbon (DOC) were measured by combustion in a total organic carbon (TOC) analyzer. Salinity was measured by refractometer (SALINITY). pH was measured by ion-selective electrode as part of the alkalinity procedure and is reported in the ALKALINITY analysis.
DOI: 10.5281/zenodo.8256644
title: IODP Expedition 382 Gas safety report

description: This composite report returns data from two different gas chromatograph configurations (GC3 and NGA). Each row combines data from several measurements made on the same sample at the same time for a particular headspace or vacutainer sample. If data do not exist for a particular expedition, the column does not appear. Gas samples were measured by gas chromatography and either flame ionization detection (GC-FID) or thermal conductivity detection (GC-TCD). Reported analytes may include methane, ethane, ethene, propane, propene, n-butane, i-butane, n-pentane, i-pentane, n-hexane, i-hexane, n-heptane, i-heptane, nitrogen, oxygen, carbon monoxide, carbon dioxide, and hydrogen sulfide. When data are available, methane to (ethane + ethene) ratio (C1/C2�ratio) is reported. To identify individual samples and tests, see each separate analysis (GC3, NGAFID, and/or NGATCD).
DOI: 10.5281/zenodo.8256645
title: IODP Expedition 382 Gas safety report

description: This composite report returns data from two different gas chromatograph configurations (GC3 and NGA). Each row combines data from several measurements made on the same sample at the same time for a particular headspace or vacutainer sample. If data do not exist for a particular expedition, the column does not appear. Gas samples were measured by gas chromatography and either flame ionization detection (GC-FID) or thermal conductivity detection (GC-TCD). Reported analytes may include methane, ethane, ethene, propane, propene, n-butane, i-butane, n-pentane, i-pentane, n-hexane, i-hexane, n-heptane, i-heptane, nitrogen, oxygen, carbon monoxide, carbon dioxide, and hydrogen sulfide. When data are available, methane to (ethane + ethene) ratio (C1/C2�ratio) is reported. To identify individual samples and tests, see each separate analysis (GC3, NGAFID, and/or NGATCD).
DOI: 10.6084/m9.figshare.25246015
title: 01_3p5K_40nWto7p3uW.txt

description: Power dependent diffusion data
DOI: 10.6084/m9.figshare.25246015.v1
title: 01_3p5K_40nWto7p3uW.txt

description: Power dependent diffusion data
DOI: 10.5281/zenodo.8264023
title: IODP Expedition 382 Magnetic susceptibility (Kappabridge)

description: Bulk magnetic susceptibility and anisotropy of magnetic susceptibility (AMS) were measured on discrete samples using an Agico KLY-4 Kappabridge susceptibility meter. Report includes individual and average principal susceptibilities, inclination and declination of principal susceptibilities, and volume-corrected bulk susceptibility.