cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/274e11f9622e733e08d1a4786203ce85
title: Repeat overhead photographs of microplots in a cross-scale interactions experiment (CSIS) at Jornada Basin LTER, 2013-ongoing

description: This dataset contains archived overhead photos collected from microplots in a long-term experiment (2013-present) of cross-scale interactions (CSIs) at the Jornada Basin LTER site in southern New Mexico, U.S.A. Experimental treatments were initiated in 2013 at 15 experimental blocks, each with 4 treatment plots: plant-scale herbicide of mesquite shrubs, patch-scale connectivity modifiers (ConMods), herbicide + ConMods, and control without manipulations. Repeat, overhead (downward-looking) photographs of ten "microplots" in each plot were taken for estimation of litter, soil, and vegetation cover in the experimental treatment and control plots over time. Photographs have been rotated and then cropped to provide standardized areas for this analysis. The photographs are archived by year in Zip files. This study is ongoing and new photos will be added annually. Cover estimates derived from these photos are in EDI dataset knb-lter-jrn.210413005.
DOI: 10.5281/zenodo.7982438
title: Understanding and mitigating resistive losses in fired passivating contacts: role of the interfaces and optimization of the thermal budget

description: We study p-type passivating contacts based on SiC<sub>x</sub> formed via a rapid thermal processing step, using conditions compatible with the firing used to sinter screen-printed metallization pastes in industry. Firstly, we separate the contributions of the two interfaces to the contact resistivity (wafer/contact and contact/metal), identifying tunnelling at the wafer interface as the main contribution. We then investigate the dependence of contact resistivity and sheet resistance of the SiC<sub>x</sub> layer on the concentration of active dopants and we propose strategies to reduce both resistances by increasing the thermal budget applied during firing. Lastly, we discuss potentials and limitations of implementing the investigated stacks as rear side contacts of p-type devices with localized metallization, and we show that an oxide layer that can withstand high thermal budgets is the key factor for obtaining high passivation quality and good electrical properties at the same time. The results obtained with an oxide based on N<sub>2</sub>O plasma oxidation show that this layer is a promising candidate for such an application.
DOI: 10.5281/zenodo.7982437
title: Understanding and mitigating resistive losses in fired passivating contacts: role of the interfaces and optimization of the thermal budget

description: We study p-type passivating contacts based on SiC<sub>x</sub> formed via a rapid thermal processing step, using conditions compatible with the firing used to sinter screen-printed metallization pastes in industry. Firstly, we separate the contributions of the two interfaces to the contact resistivity (wafer/contact and contact/metal), identifying tunnelling at the wafer interface as the main contribution. We then investigate the dependence of contact resistivity and sheet resistance of the SiC<sub>x</sub> layer on the concentration of active dopants and we propose strategies to reduce both resistances by increasing the thermal budget applied during firing. Lastly, we discuss potentials and limitations of implementing the investigated stacks as rear side contacts of p-type devices with localized metallization, and we show that an oxide layer that can withstand high thermal budgets is the key factor for obtaining high passivation quality and good electrical properties at the same time. The results obtained with an oxide based on N<sub>2</sub>O plasma oxidation show that this layer is a promising candidate for such an application.
DOI: 10.6084/m9.figshare.24101001
title: <b>Assessing nitrate groundwater hotspots in Europe reveals a severely inadequate designation of Nitrate Vulnerable Zones</b>

description: Supplementary data for "<b>Assessing nitrate groundwater hotspots in Europe reveals a severely inadequate designation of Nitrate Vulnerable Zones</b>"<br>Predictors.rar: (post-processed) annual predictors for 1961-2019 [Format: raster]RF_dataset_2000_2019.rar: dataset with the monitoring stations across Europe + predictors [Format: Rds file]RF_model.rar: contains different data formats of (i) decadal metrics (1992-2003, 2004-2019, 1992-2019) including mann-kendal test [Format: csv], (ii) hypertuned RF model with each iteration (hyperparameters and RMSE) [Format: csv], (iii) partial dependence plots for selected predictors [Format: csv], (iv) hyper-tuned RF model [Format: Rds], (v) RF model predictions for the period 1961-2019 [Format: csv] and (vi) in [Format: raster]Scenario_analysis.rar: contains different data formats of (i) scenario simulations for the historical (1961-1990) and present (2000-2019) scenarios for the period 1992-2019 [Format: raster]Uncertainty_analysis.rar: contains the uncertainty analysis for different N predictors [Format: raster]
DOI: 10.5281/zenodo.7677434
title: Dataset Treatment of early childhood caries with three different topical fluoride treatments: a randomised clinical trial

description: These files contain the data and the research script about the effectiveness of the 38% silver diamine fluoride (SDF, SDI Riva Star) and Tiefenfluorid (TF, Humanchemie GmbH), using two different application protocols in children ≤71 months of age with early childhood caries, with a focus on patient-centred outcomes including major complications (pain, abscess, extraction) and minor complications (lesion progression). This work was funded by European Regional Development Fund Postdoc Latvia 1.1.1.2/VIAA/3/19/543, Contract No 9.-14.5/27. Uribe was supported by European Union’s Horizon 2020 grant agreement 857287 for the Baltic Biomaterials Centre of Excellence.
description: This research was financed by Postdoc Latvia, 1.1.1.2/VIAA/3/19/543, contract no 9.-14.5/27. S.E.U. acknowledges financial support from the European Union's Horizon 2020 research and innovation programme under grant agreement No 857287.
DOI: 10.5281/zenodo.7677435
title: Dataset Treatment of early childhood caries with three different topical fluoride treatments: a randomised clinical trial

description: These files contain the data and the research script about the effectiveness of the 38% silver diamine fluoride (SDF, SDI Riva Star) and Tiefenfluorid (TF, Humanchemie GmbH), using two different application protocols in children ≤71 months of age with early childhood caries, with a focus on patient-centred outcomes including major complications (pain, abscess, extraction) and minor complications (lesion progression). This work was funded by European Regional Development Fund Postdoc Latvia 1.1.1.2/VIAA/3/19/543, Contract No 9.-14.5/27. Uribe was supported by European Union’s Horizon 2020 grant agreement 857287 for the Baltic Biomaterials Centre of Excellence.
description: This research was financed by Postdoc Latvia, 1.1.1.2/VIAA/3/19/543, contract no 9.-14.5/27. S.E.U. acknowledges financial support from the European Union's Horizon 2020 research and innovation programme under grant agreement No 857287.
DOI: 10.6084/m9.figshare.24198141.v1
title: Supplementary Material for: At the head and heart of oxytocin’s stress-regulatory neural and cardiac effects: a chronic administration RCT in children with autism

description: Introduction. Intranasal administration of oxytocin presents a promising new approach to reduce disability associated with an autism spectrum disorder diagnosis. Previous investigations have emphasized the amygdala as the neural foundation for oxytocin’s acute effects. To fully understand oxytocin’s therapeutic potential however, it is crucial to gain insight into the neuroplastic changes in amygdala circuitry induced from chronic oxytocin administrations, particularly in pediatric populations. Objective. We aimed to examine the impact of a four-week course of intranasal oxytocin on amygdala functional connectivity in children with autism, compared to placebo. Additionally, we investigated whether oxytocin improves cardiac autonomic arousal, as indexed by high-frequency heart rate variability. Methods. Fifty-seven (45 boys, 12 girls) children with autism aged 8-12 years participated in a double-blind, randomized pharmaco-neuroimaging trial involving twice-daily administrations of intranasal oxytocin or placebo. Resting-state fMRI scans and simultaneous, in-scanner heart rate recordings were obtained before, immediately after and four weeks after the nasal spray administration period. Results. Significant reductions in intrinsic amygdala-orbitofrontal connectivity were observed, particularly at the four-week follow-up session. These reductions correlated with improved social symptoms and lower cardiac autonomic arousal. Further, oxytocin’s neural and cardiac autonomic effects were modulated by epigenetic modifications of the oxytocin receptor gene. The effects were more pronounced in children with reduced epigenetic methylation, signifying heightened expression of the oxytocin receptor. Conclusion. These findings underscore that a four-week oxytocin administration course decreases amygdala connectivity and improves cardiac autonomic balance. Epigenetic modulators may explain inter-individual variation in responses to oxytocin.
DOI: 10.6084/m9.figshare.24088371.v1
title: Supplementary Material for: Refractory intestinal Behçet-like disease associated with trisomy 8 myelodysplastic syndrome resolved by parenteral nutrition

description: Intestinal Behçet disease (BD), associated with myelodysplastic syndrome (MDS), is often refractory to treatment. An 80-year-old man with trisomy 8 MDS (refractory anemia) developed intermittent fever. Despite investigations to exclude infectious disease, autoimmune disease, and malignancy as the cause of the fever, the etiology could not be determined. A colonoscopy revealed several shallow round ulcers in the ileocecal region and ascending colon, and the biopsy specimens showed non-specific inflammation. Thereafter, the patient experienced abdominal pain and diarrhea. Other than an oral aphthous ulcer, the patient did not show symptoms to meet the diagnostic criteria for BD. The patient was diagnosed with intestinal ulcers (intestinal BD-like disease) with MDS and trisomy 8. After treatment failure with 5-aminosalicylic acid, steroid, colchicine, and azacytidine, cerebral infarction occurred. Eating was difficult because of the patient’s impaired consciousness; hence, total parenteral nutrition (TPN) was commenced. The fever and abdominal symptoms improved with bowel rest over approximately one month. Small amounts of food were orally administered to the patient following recovery from the after-effects of the cerebral infarction, but diarrhea and fever repeatedly flared up. Therefore, TPN was continued at home. The patient has not experienced any further intestinal BD symptoms for approximately one year with bowel rest. Nutritional therapy, including bowel rest, may be an effective treatment option for intestinal BD with MDS, and might be used as an induction therapy of remission or a supportive therapy for other treatments.
DOI: 10.6084/m9.figshare.24210663.v1
title: Supplementary Material for: Management of Implant Extrusion Following Thyroplasty for Vocal Fold Paralysis – A Case Report

description: The most widely used laryngeal surgery technique for patients with vocal fold paralysis is medialization thyroplasty. Materials such as Gore-Tex, Silastic, and hydroxyapatite are often used, and the most worrisome possible complication is extrusion of the implant. A 36-year old female patient with a history of pediatric cardiac sugery was diagnosed with left vocal cord paralysis after an episode of upper respiratory infection with a working diagnosis of subclinical left vocal cord paralysis following cardiac surgery. She underwent medialization thyroplasty with a Gore-Tex implant under local anesthesia. On the 21st postoperative day, she presented with sudden-onset hoarseness and dysphagia due to GoreTex implant extrusion. The implant was removed and augmentation of the left vocal cord with adipose tissue was performed. Only 14 cases of Gore-Tex impant extrusion have been described in the literature so far. The aim of this case report is not only to show one possible complication when using a Gore-Tex implant, but also to present fat augmentation as one of the solutions for revision medialization and salvage treatment, with sustained long-term results.
DOI: 10.34740/kaggle/dsv/6666756
title: 2021 World Population (updated daily)
DOI: 10.6084/m9.figshare.24230707
title: BOUCHER_supplementable_table_2

description: PET/CT devices and imaging protocols used by the different centers
DOI: 10.6084/m9.figshare.24230707.v1
title: BOUCHER_supplementable_table_1

description: PET/CT devices and imaging protocols used by the different centers
DOI: 10.6084/m9.figshare.24230707.v2
title: BOUCHER_supplementable_table_2

description: PET/CT devices and imaging protocols used by the different centers
DOI: 10.6084/m9.figshare.24290047
title: Weekly rainfall precipitation data by governorate in Yemen between 2016 and 2020

description: These datasets were created using CHIRPS rainfall product p05 and interpolating with Yemen governorate shapefile to obtain summary statistics of rainfall by week (mean, median, min, max, sd).
DOI: 10.6084/m9.figshare.24212655
title: BOUCHER_supplemental_table_1_ Classification of MEN1 variants according to the ACMG-AMP guidelines

description: supplemental table 2_ Classification of MEN1 variants according to the ACMG-AMP guidelines
DOI: 10.6084/m9.figshare.24212655.v2
title: BOUCHER_supplemental table 2_ Classification of MEN1 variants according to the ACMG-AMP guidelines

description: supplemental table 2_ Classification of MEN1 variants according to the ACMG-AMP guidelines
DOI: 10.4121/7b8ae119-47b9-4759-9c1f-90f70f94ba73.v1
title: TUD R Cafe Plot-a-thon: 4TU.ResearchData statistics

description: This dataset is to visualize the 4TU.ResearchData resources for the plot-a-thon.
DOI: 10.34740/kaggle/dsv/6666779
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.6084/m9.figshare.24249946.v1
title: Supplementary Material for: Combination of osimertinib with concurrent chemotherapy and hormonal therapy for synchronous NSCLC, hormone receptor positive breast cancer and triple negative breast cancer.

description: Patients presenting with multiple primary malignancies remains a growing challenge for physicians due to a lack of data for generalizable guidelines. Identification of driver mutations in carcinogenesis lead to the development of targeted treatment of many different cancer types but its combination with other anti-cancer therapy is not well-understood. We report a case of a 66-year-old woman who presented with triple negative breast cancer, multifocal hormone receptor positive breast cancer, primary EGFR mutated lung adenocarcinoma, likely primary lung adenocarcinoma of unspecified mutational status and a solitary metastatic lesion in the brain from one of her four primary cancers. She was treated with stereotactic radiosurgery and osimertinib in combination with carboplatin/nab-paclitaxel, doxorubicin/cyclophosphamide and letrozole, with excellent clinical and radiographical response. We did not observe synergistic toxicity or unexpected adverse events from treatment. To the best of our knowledge, this is the first report of concurrent osimertinib with these chemotherapy and hormonal therapy agents. As large-scale studies are difficult to conduct for these rare cases requiring exceptional treatment, it is important for physicians to build on the community’s shared experience via case reports to better predict efficacy and safety of combining targeted agents with other conventional systemic treatments.
DOI: 10.4121/434fc248-07b2-4388-999b-1ca1e4658c63
title: Data underlying the publication: Supply and demand in the digital transformation of fruit farming: a cross-analysis of digital innovations with stakeholder perceptions, barriers, and adoption in southern Germany

description: Dataset for paper on digital tools in fruit farming. Comprehensive analysis of digital tool characteristics from January-April 2021. Tools were selected from a comprehensive literature and media review based on criteria. Fourteen inductive or deductive categories were created to organize the review.
DOI: 10.4121/434fc248-07b2-4388-999b-1ca1e4658c63.v1
title: Data underlying the publication: Supply and demand in the digital transformation of fruit farming: a cross-analysis of digital innovations with stakeholder perceptions, barriers, and adoption in southern Germany

description: Dataset for paper on digital tools in fruit farming. Comprehensive analysis of digital tool characteristics from January-April 2021. Tools were selected from a comprehensive literature and media review based on criteria. Fourteen inductive or deductive categories were created to organize the review.
DOI: 10.6084/m9.figshare.24235144.v1
title: Supplementary Material for: Case Report: Sorafenib-induced Capillary Leak Syndrome

description: Capillary leak syndrome is a rare life-threatening disorder of acute endothelial hyperpermeability. It consists of initial fluid extravasation resulting in hypotension, hypoalbuminemia and hemoconcentration, followed by noncardiogenic pulmonary edema from rapid fluid remobilization into intravascular compartment. Drug-induced etiology is an important diagnostic consideration in cancer patients, particularly with use of antimetabolites, immunostimulants and monoclonal antibodies. Sorafenib-mediated capillary leak syndrome has never been reported. Here, we present the case of a 29-year-old female patient with a desmoid tumor of the thigh, who was admitted for acute hypoxic respiratory failure after recent initiation of sorafenib. She was found to have extensive pulmonary edema, bilateral pleural effusions, and hemoconcentration, all of which stabilized on supportive care with non-invasive mechanical ventilation and intravenous diuresis. Her infectious and cardiac work-up were negative. Given the temporal relationship between sorafenib use and symptom onset as well as a lack of an alternative etiology of her findings, patient was deemed to have sorafenib-induced acute capillary leak syndrome. Importantly, she did not become hypotensive prior to or during this hospitalization. To our knowledge, we reported for the first time an atypical presentation of acute capillary leak syndrome due to sorafenib use without hemodynamic instability.
DOI: 10.5281/zenodo.7612026
title: Detection of proton-dependent peptide uptake into liposomes by bacterial peptide transporter DtpB using pyranine assay

description: For more details please see: <strong>Plasticity of the binding pocket in peptide transporters underpins promiscuous substrate recognition</strong> https://dx.doi.org/10.1016/j.celrep.2023.112831
DOI: 10.5281/zenodo.7612027
title: Detection of proton-dependent peptide uptake into liposomes by bacterial peptide transporter DtpB using pyranine assay

description: For more details please see: <strong>Plasticity of the binding pocket in peptide transporters underpins promiscuous substrate recognition</strong> https://dx.doi.org/10.1016/j.celrep.2023.112831
DOI: 10.4121/4fd90d71-ffd9-4db2-a358-8576f5b19a32
title: Analytical quay wall model; MODEL underlying the dissertation: "Amsterdam quays under pressure - Modelling and testing of historic canal walls"

description: As an integral component of the doctoral dissertation titled "Amsterdam Quay Walls Under Pressure – Modeling and Testing of Historic Canal Walls" authored by Mart-Jan Hemel, an analytical quay wall program was meticulously developed using MATLAB. This specialized program served various purposes, including the replication of experiments conducted at the Overamstel test site, conducting sensitivity and probability studies, and facilitating forensic research into the Grimburgwal's collapse. Notably, this model demonstrates substantial potential in efficiently and accurately modelling historical quay walls.<br>In this data-set a manual and full code of the program is provided.<br>The provided code is made available as open access, and all credits and recognition for its creation go to Mart-Jan Hemel, the original author. This code is provided here for educational and illustrative purposes, and any use or further distribution should be attributed to the author. If you find this code useful or have any questions, please consider reaching out to the original author for more information and guidance.
DOI: 10.4121/4fd90d71-ffd9-4db2-a358-8576f5b19a32.v1
title: Analytical quay wall model; MODEL underlying the dissertation: "Amsterdam quays under pressure - Modelling and testing of historic canal walls"

description: As an integral component of the doctoral dissertation titled "Amsterdam Quay Walls Under Pressure – Modeling and Testing of Historic Canal Walls" authored by Mart-Jan Hemel, an analytical quay wall program was meticulously developed using MATLAB. This specialized program served various purposes, including the replication of experiments conducted at the Overamstel test site, conducting sensitivity and probability studies, and facilitating forensic research into the Grimburgwal's collapse. Notably, this model demonstrates substantial potential in efficiently and accurately modelling historical quay walls.<br>In this data-set a manual and full code of the program is provided.<br>The provided code is made available as open access, and all credits and recognition for its creation go to Mart-Jan Hemel, the original author. This code is provided here for educational and illustrative purposes, and any use or further distribution should be attributed to the author. If you find this code useful or have any questions, please consider reaching out to the original author for more information and guidance.
DOI: 10.6084/m9.figshare.24290161
title: Raw data

description: Using GPS-GSM trackers, we monitored individual geese in flight throughout the year.
DOI: 10.6084/m9.figshare.24290161.v1
title: Raw data

description: Using GPS-GSM trackers, we monitored individual geese in flight throughout the year.
DOI: 10.6084/m9.figshare.23977791.v1
title: Supplementary Material for: Aortic stiffness is independently associated with intracranial carotid artery calcification in patients with ischemic stroke

description: Background and aims Intracranial carotid artery calcification (ICAC), as a strong contributor to the occurrence of ischemic stroke, might be present in the medial or intimal arterial layer. Traditional cardiovascular risk factors (CVRFs) are associated with ICAC; however, its association with new markers of vascular function are less understood. The paper aims to evaluate the relationship between carotid-femoral pulse wave velocity (CF-PWV) and ICAC subtypes. Methods We enrolled 65 patients with ischemic stroke. CF-PWV, systolic, diastolic, mean blood pressure, and pulse pressure (SBP, DBP, MBP, PP) were measured within 6±2 days after stroke onset, CT was performed within 24 hours. ICAC on the stroke site was classified by two methods: volume- and score-based. Tertiles of ICAC volume were determined, and low-grade ICAC (T1) was regarded as a reference. According to the score-based method, (dominant) medial and (dominant) intimal ICAC subtypes were determined. Data were analysed with multivariate logistic regression. Results Medial and intimal ICAC subtypes were found in 34 (52%) and 24 (37%) patients, respectively. In 11% of patients no ICAC calcifications were found. CF-PWV was higher in patients with high-grade ICAC (OR=1.56, 95%CI=1.03-2.35, p=0.035). CF-PWV was higher in patients with the medial ICAC subtype (OR=1.60, 95%CI=1.00-2.55, p=0.049) after adjustment for traditional CVRFs. Conclusions Our study demonstrates that among patients with ischemic stroke, aortic stiffness is independently associated with ICAC, and that medial ICAC, compared with intimal ICAC, is accompanied by more advanced aortic stiffness.