cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28765067.v1
title: Adult male Drosophila hemo lymph aqueous metabolite profiling on 7-day and 14-day High sugar diets with normal diet controls.

description: <b>Metabolomics: The samples were three replicates of Hemolymph collected from adult males flies subjected to 7- and 14- day normal or High Sugar (30% more sucrose in standard lab food). Per replicate we collected hemolymph from 30 male flies. </b>Targeted LC-MS metabolite analysis was performed on a duplex-LC-MS system composed of two Shimadzu UPLC pumps, CTC Analytics PAL HTC-xt temperature-controlled auto-sampler, and AB Sciex 6500+ Triple Quadrupole MS equipped with ESI ionization source. UPLC pumps were connected to the auto-sampler in parallel and could perform two chromatography separations independently from each other. Each sample was injected twice on two identical analytical columns (Waters XBridge BEH Amide XP), where separations were performed in hydrophilic interaction liquid chromatography (HILIC) mode. While one column was performing separation and MS data acquisition in ESI+ ionization mode, the other column was getting equilibrated for sample injection, chromatography separation, and MS data acquisition in ESI- mode. Each chromatography separation was 18 minutes (total analysis time per sample was 36 minutes). MS data acquisition was performed in multiple-reaction-monitoring (MRM) mode. LC-MS system was controlled using AB Sciex Analyst 1.6.3 software. Measured MS peaks were integrated using AB Sciex MultiQuant 3.0.3 software. Up to 158 metabolites (plus 4 spiked standards) were measured across the fly samples study set, and up to 148 metabolites (plus 34 SILISs) were measured in the hemolymph sample set. For the hemolymph set, absolute concentrations of 30 metabolites were determined. In addition to the two study samples, two sets of quality control (QC) samples were used to monitor the assay performance and data reproducibility. One QC [QC(I)] was a pooled human serum sample used to monitor system performance, and the other QC [QC(S)] was pooled study samples. This QC was used to monitor data reproducibility. Each QC sample was injected per every 10 study samples. The median CV for the fly set was 2.8%, while for the blood samples was 11.1%.
DOI: 10.17632/rgk5kn8y9k
title: Patient Satisfaction of General Dermatologists: A Quantitative and Qualitative Analysis of 38,008 Online Reviews by Gender and Years of Experience

description: Raw Data for manuscript: Patient Satisfaction of General Dermatologists: A Quantitative and Qualitative Analysis of 38,008 Online Reviews by Gender and Years of Experience
DOI: 10.6084/m9.figshare.16892893.v1
title: Genome architecture used to supplement species delineation in two cryptic marine ciliates (study on congeneric tintinnid ciliates Schmidingerella arcuata and Schmidingerella meunieri (published as Smith et al. 2022 in Molecular Ecology Resources)

description: <em>These data are associated with the following publication:</em> <br> <strong>Genome architecture used to supplement species delineation in two cryptic marine ciliates</strong> <br> Susan A. Smith, Luciana F. Santoferrara, Laura A. Katz, George B. McManus <br> <em>Molecular Ecology Resources</em> <em>2022</em> <br> Article DOI: 10.1111/1755-0998.13664 <br> <br> For clarification regarding these data, included is a table listing the GenBank accession numbers attributed to these files on NCBI: <em>Accessions_Schmid_Smith_et_al_2022.docx</em> <br> <br> <br> <strong>Included here:</strong> <br> For both <em>Schmidingerella arcuata </em>and <em>Schmidingerella meunieri:</em> <br> -micronuclear genome (MIC) assembly -macronuclear transcriptome (MAC) assembly -rDNA sequences (SSU, LSU, ITS) used for initial barcode data -sequences used for isolate-specific primer analysis from Table S2 <br> -Word Doc with Supplementary Information: <em>Table S1. </em>Micronuclear pattern details <em>Table S2.</em> Isolate-specific primer details <em>File S3.</em> Micronuclear pattern sequences used for Figure 8 (fully annotated) <br> <br> Data Availability Statement copied directly from Smith et al 2022: <br> This project has been deposited at NCBI under the Bioproject IDs: PRJNA829814 (<em>S. arcuata</em>) and PRJNA828278 (<em>S. meunieri</em>). The MIC and MAC data can be found under the GenBank accession nos. JAMFLK000000000 (MIC genome), GISN00000000 (MAC transcriptome), SRR11933493 (MIC raw reads) and SRR18847964 (MAC raw reads) for <em>S. arcuata</em>; and JAMFLJ000000000 (MIC genome), GJXX00000000 (MAC transcriptome), SRR19268018 (MIC raw reads) and SRR18847682 (MAC raw reads) for <em>S. meunieri</em>. Barcode sequences (rRNA) were deposited in GenBank under the accession nos. ON430520 (SSU), ON430522 (LSU) and ON430517 (ITS) for <em>S. arcuata</em>. For <em>S. meunieri</em>, rRNA gene barcode sequences are deposited under the accession nos. ON430519 (SSU), ON430521 (LSU) and ON428215 (ITS). Isolate‐specific primers and sequences are available on GenBank under the accession nos. ON677305, ON677306, ON677307 and ON677308. These data and a file containing the sequences from Figure 8 are also available on FigShare at <sub>https://doi.org/10.6084/m9.figshare.16892893</sub> (Smith et al., 2022a, 2022b, 2022c). <br> <br> <br> <br> <br>
DOI: 10.6084/m9.figshare.23520246.v5
title: Síntesis de resultados de revisión sistemática sobre la formación docente y su impacto en el análisis de la práctica pedagógico-didáctica del profesorado universitario

description: Los datos presentados son producto de una búsqueda realizada en cuatro bases de datos académicas (Scopus, Web of Science, Dialnet Plus y ERIC), como parte de una revisión sistemática sobre la formación docente y su impacto en el análisis de las prácticas pedagógico-didácticas de los profesores universitarios. Para ello, se tomaron en cuenta los siguientes criterios: Artículos, libros, capítulos de libros, tesis, ponencia o informes con metodología cuantitativa o cualitativa, publicados entre 2021 y 2023 en idioma español, inglés o portugués, el área de Educación, Psicología y Educación, o Ciencias Sociales, que respondan al término de búsqueda: “Formación docente y análisis de la práctica docente en profesores universitarios”. Si bien se pretendía desarrollar una revisión bien fundamentada tanto teórica como metodológicamente, no se buscó ser exhaustivos; en ese sentido, se tomarán en cuenta solamente los primeros 10 resultados relevantes en cada idioma, según cada base de datos académica consultada.
DOI: 10.17632/bc6r7rgvpk
title: pessure injury

description: We know that cancer is a risk factor for  pressure injury, but cancer of different organs has different clinical characteristics, and we think that the risk of developing pressure injury varies by type of cancer. The aim of the study was to explore the relationship between different types of cancer and pressure injury. All of our study data came from the hospital's electronic medical record system, and our data showed the sex, age, diagnosis, comorbidity, and presence or absence of pressure injury prior to admission in 1,577 cancer patients.
DOI: 10.17632/znr5dy4x29
title: Adaptive introgression from indicine cattle into white cattle breeds from Central Italy

description: Genotype data in PLINK binary format associated with the following paper: Barbato et al., 2020. 'Adaptive introgression from indicine cattle into white cattle breeds from Central Italy' Scientific Reports. DOI: 10.1038/s41598-020-57880-4
DOI: 10.17632/t8cncxrfh2
title: Bathymetry mapping using Unmanned Surface Vehicle

description: This repository contains bathymetry data for Grand Lake, Oklahoma, along with a Python script for interpolating and visualizing the lake's bottom elevation. The dataset, titled "Horse Creek Cove Bathymetric Data 2020 Survey Manuel.csv," includes depth measurements (latitude, longitude, and depth) collected using an Unmanned Surface Vehicle (USV) named "MANUEL." The provided Python script performs interpolation to estimate depths at locations not directly sampled, generating detailed bathymetric plots of the lakebed. These visualizations offer a comprehensive understanding of the underwater topography of Grand Lake.
DOI: 10.17632/wyhj26s4ny
title: Zic family member 5 promotes survival  in human pancreatic cancer and cholangiocarcinoma cells

description: Numerical data of Fig. 1-3.
DOI: 10.60893/figshare.apl.28259732.v1
title: Supplemental material

description: the supplementary material for characterization of bulk crystal and the thickness of NbSe2, superconductivity in pure NbSe2, electrical transport characterization of an additional device and methods for fabrication and measurements of our devices.
DOI: 10.17632/kpjz5k7pkg
title: Survey data regarding corporate culture and employee innovation capability

description: 1. Data supplies the information about actual situation of employ innovation capability in companies
2. Data illustrates the factors related to corporate culture in enterprises.
3. Data gives the scale of corporate culture and employee innovation capability in companies
4. Data is going to provide data as well as idea for future research concern corporate culture.
5. The data offers evidence for managers of companies to improve employee innovation capability through corporate culture.
DOI: 10.17632/f3z97zp6h6
title: GDP-INFLATION I GPR

description: The monthly indices on GDP, CPI, GPR and EPU are in the setting of emerging European countries
DOI: 10.21233/j0j6-9312
title: Shavun Pond pollen surface sample dataset

description: Raw data for the Shavun Pond pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.26928439.v1
title: Regression with Large Language Models for Materials and Molecular Property Prediction (part 1 of 2)

description: Data for the study "Regression with Large Language Models for Materials and Molecular Property Prediction" by Ryan Jacobs, Maciej P. Polak, Lane E. Schultz, Hamed Mahdavi, Vasant Honavar, and Dane Morgan.
DOI: 10.17632/n36vrd8zrp
title: Datasets on the GRP of Russian regions, GRP sectoral composition and growth rates in 2013 - 2018

description: This work presents a comprehensive large-scale assessment of the gross regional products of 85 Russian regions. The computations characterize the level of economic development of different parts of the country: GRP measures the value of goods and services produced in a region; GRP per capita reflects the economic output of a region and the standard of living; the ratio of different economic sectors defines the sectoral composition of regional economies. Special attention was paid to the analysis of datasets for the production of goods, market and non-market services.
DOI: 10.17632/5yjrm3vkj9
title: Carnivore-Livestock Conflict in the Mudumu Landscape, Namibia (2009-2021): A Comprehensive Data Set

description: This dataset documents carnivore-livestock conflicts in the Mudumu Landscape, Namibia, from 2009 to 2021. The data were meticulously gathered from event book records maintained by six communal conservancies - Balyerwa, Dzoti, Mashi, Mayuni, Sobbe, and Wuparo - within the framework of Community-Based Natural Resource Management (CBNRM). The dataset includes detailed records of incidents, specifying the date, location, species involved (both carnivores and livestock), and proximity to key environmental features such as parks, roads, and rivers. This dataset serves as a valuable resource for understanding the spatial and temporal patterns of human-wildlife conflict in this region.
DOI: 10.6084/m9.figshare.28759331.v1
title: Supplementary_Information_xyz_DFT

description: xyz optimized coordinates (DFT wB97x/def2-TZVP) for 98 Graphene Nanoflakes.
DOI: 10.6084/m9.figshare.28750028.v1
title: data.xlsx

description: <b>Habitat selectivity of Goldcrest </b><b><i>Regulus regulus</i></b><b> and Firecrest </b><b><i>Regulus ignicapilla</i></b><b>in the montane forests of the Eastern Carpathians</b>
DOI: 10.15468/dl.7fvrak
title: Occurrence Download

description: A dataset containing 11644 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is New Zealand",
 "OccurrenceStatus is Present",
 "TaxonKey is Knightia excelsa R.Br."
 ]
}

 The dataset includes 11644 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009185-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/fggvncvm75
title: The Effects of Economic Policy Uncertainty on Crime

description: Data for the manuscript "The Effects of Economic Policy Uncertainty on Crime".
DOI: 10.17632/vzhs4m5573
title: "Counterfactual reasoning underlies the learning of priors in decision making", Ariel Zylberberg, Daniel Wolpert, Michael Shadlen, Neuron 2018

description: "data(s)" contains the behavioral data from subject s. Explanation of variables: choice: 0 for leftward choices, 1 for rightward choices req_choice: identifies the correct choice for each trial correct: 0 for incorrect choices, 1 for correct choices coh: signed motion coherence (negative for leftward motion) dotdur: motion duration in seconds confidence: in range 0.5 (guessing) to 1 (full certainty) subject_number: subject id block_number: block number belief: belief report (0: sure of a leftward block bias; 1: sure of rightward block bias) base_rate: base rate of the block trial_number: trial number in the block
DOI: 10.6084/m9.figshare.28428965.v1
title: Supplementary Material for: Membranoproliferative glomerulonephritis with striated ultrastructural deposits with significantly elevated fibrinogen and fibronectin on mass spectrometry analysis: A case report and literature review

description: Glomerular diseases with organized deposits can be classified into various etiologies. A diagnostic algorithm based on clinical and pathological findings has been proposed. However, some cases cannot be diagnosed using existing algorithms. Here, we report the case of a 77-year-old man diagnosed with membranoproliferative glomerulonephritis (MPGN) with striated ultrastructural deposits, microfilament-like substructures with straight bands arranged in parallel in the subendothelial space by two sequential renal biopsies. His examinations and clinical findings were incompatible with known glomerular diseases with organized deposits. Dialysis was initiated 10 months after the second biopsy procedure. Furthermore, we report the first mass spectrometry analysis of laser micro-dissected glomeruli with striated ultrastructural deposits, which revealed significant levels of fibrinogen and fibronectin. Immunostaining was positive for fibrinogen, fibrin, and fibronectin in the subendothelial space. These findings suggest that the deposits were composed of a fibrin-fibronectin complex, and that accumulation of these fibrin-fibronectin complexes possibly induced endothelial injury, leading to MPGN. We also reviewed the literature on the clinical and pathological characteristics of the four cases with striated ultrastructural deposits. Our investigation showed that all patients had the MPGN pattern and striated ultrastructural deposits in the subendothelial space, and all underwent hemodialysis within 3 years after renal biopsy. Clinicians should be aware of the findings of glomerulonephritis with striated ultrastructural deposits since this disease may be a new entity and has a poor prognosis.
DOI: 10.17632/9zd4vncrf4
title: A study of Ali et al., Unprocessed Files_June 2022

description: Al et al., demonstrate the regulation of bicarbonate uptake by mTORC1 signaling.
DOI: 10.17632/mm8bdjbbnp
title: ANALYSIS OF CONE PENETROMETER LIQUID LIMIT FLOW CURVE USING MATHEMATICAL MODEL

description: This paper presents a mathematical model which defines the moisture-penetration relationship using British cone. The developed mathematical model gives a unique opportunity of computing or predicting the cone penetration of the soil even at a very low moisture content at which, due to practical limitation it is impossible to determine the soil penetration. The model was found to fit the moisture-penetration data reasonably well. The model was used to compute the penetration of soil at the plastic limit of 394 soils. This study indicates that the plastic limit cannot be defined using one unique penetration value.
DOI: 10.6084/m9.figshare.13622831.v1
title: DayToFlower.csv

description: R tutorial dataset
DOI: 10.6084/m9.figshare.3525779.v1
title: Appendix A. A map of the study region showing the resolution and extent of data used for analyses.

description: A map of the study region showing the resolution and extent of data used for analyses.
DOI: 10.17632/56jcrt85dt
title: Instantaneous Global Horizontal Irradiance and Clearness Index data with high temporal resolution for 1016 days

description: Instantaneous Global Horizontal Irradiance measurements at a two seconds sampling time (0.5 Hz sampe rate) for 1016 days, between 2016-08-19 and 2019-11-10, making a total of 21,959,912 data points, measurements where conducted in Bogotá, Colombia at Latitude: 4 ° 35 ' N, Longitude: 74 ° 40 ' W; . Additional calculations included for each point: Air mass, Zenith angle, Extraterrestrial Solar Irradiance and Clearness index. Nights and incomplete days were discarded. Aggregated statistics for each day are included.
DOI: 10.17632/5tk7md7rxz
title: The deubiquitinase USP46 is essential for proliferation and tumor growth of HPV-transformed cancers

description: The deubiquitinase USP46 is essential for proliferation and tumor growth of HPV-transformed cancers. High-risk Human Papilloma Viruses (HPV) cause cervical, anal and oropharyngeal cancers, unlike the low-risk HPVs, which cause benign lesions. E6 oncoproteins from the high-risk strains are essential for cell proliferation and transformation in HPV induced cancers. We report that a cellular deubiquitinase, USP46 is selectively recruited by the E6 of high-risk, but not low-risk, HPV to deubiqutinate and stabilize Cdt2/DTL. Stabilization of Cdt2, a component of the CRL4Cdt2 E3 ubiquitin ligase, limits the level of Set8, an epigenetic writer, and promotes cell-proliferation. USP46 is essential for the proliferation of HPV-transformed cells, but not of cells without HPV. Cdt2 is elevated in human cervical cancers and knockdown of USP46 inhibits HPV-transformed tumor growth in xenografts. Recruitment of a cellular deubiquitinase to stabilize key cellular proteins is an important activity of oncogenic E6, and the importance of E6-USP46-Cdt2-Set8 pathway in HPV-induced cancers makes USP46 a target for the therapy of such cancers.
DOI: 10.17632/bmfwr33wv3
title: X-ray diffraction images and tensile testing results of 16 NiTiTa alloys

description: The "NiTiTa" folder contains synchrotron X-ray data of 16 different NiTiTa alloys in the annealed condition as well as the standard CeO2 sample used for instrument calibration. Alloy compositions are listed in the related paper. folder "NiTiTa 900C HEAT TREATING.is_tcyclic_RawData" contain raw tensile testing data of alloys heat treated at 900C. "NiTiTa 500C heat treating raw data" contains tensile testing raw data of alloys heat treated at 500C.
DOI: 10.6084/m9.figshare.19344932.v1
title: Supplementary Material for: Treatment Patterns, Safety, and Patient Reported Outcomes among Adult Women with Human Epidermal Growth Factor Receptor 2–Negative Advanced Breast Cancer with or without or with Unknown BRCA1/2 Mutation(s): Results of a Real-World Study from the United States, United Kingdom, and Four EU Countries

description: Introduction: This real-world study assessed the breast cancer susceptibility gene 1 or 2 mutation (BRCA1/2mut) status on treatment patterns, safety, and patient-reported outcomes (PROs) in women with human epidermal growth factor receptor 2–negative (HER2-) advanced breast cancer (ABC) in the United States, United Kingdom, and EU4 countries. Methods: Oncologists abstracted data from medical charts of adult women who presented with HER2– ABC from February to May 2015 and from March to July 2017. Data were collected using a physician-reported form and a patient-reported form, which included questions on breast cancer history/treatment, and questions from PROs instruments (EuroQol 5-Dimensions 3-Levels [EQ-5D-3L], Brief Pain Inventory [BPI], European Organisation for Research and Treatment of Cancer [EORTC] Quality of Life Questionnaire Core 30 and its breast cancer module). Results: In total, 742 oncologists provided data for 6161 patients; 27.5% were tested for BRCA1/2mut. Out of the total patient population, 3.8% had BRCA1/2mut, 16.6% BRCA1/2 wild-type (BRCA1/2wt), and 79.5% were BRCA1/2 unknown (BRCA1/2unk). Hormone receptor-positive (HR+)/HER2- ABC was more frequent within the BRCA1/2wt versus BRCA1/2mut group, and triple-negative breast cancer (TNBC) within the BRCA1/2mut versus BRCA1/2wt group. More patients with HR+/HER2- ABC with BRCA1/2mut received chemotherapy (with or without targeted or endocrine therapy) versus BRCA1/2wt (66.0% vs 50.4%; p&lt;0.01); more patients had ≥1 AE (58.0% vs 39.1%; p&lt;0.001). Among patients with BRCA1/2mut versus BCRA1/2wt, a significantly higher proportion had some problems or worse in pain discomfort (p=0.021) and anxiety/depression (p=0.007) as measured by the EQ-5D-3L; role functioning (p&lt;0.01) and dyspnea (p&lt;0.05) measured by EORTC were worse with BRCA1/2mut. Pain scores by BPI were similar between groups. Conclusions: In patients with HER2- ABC in the real-world setting, more patients with BRCA1/2mut had TNBC, received chemotherapy, had &gt;1 AE, and experienced increased discomfort, anxiety, and dyspnea and diminished role functioning versus patients with BRCA1/2wt.
DOI: 10.6084/m9.figshare.5592631.v1
title: AI vs Dermatologist Test PDF Docoment

description: We created a test .pdf file by combining 25 images of each malignancy and 20 images of each benign conditions.<br>Original resolution of images were extracted from the Asan test dataset and the Edinburgh Dermofit library, and doPDF (http://www.dopdf.com) was used with high resolution mode to create the test pdf. <br>The filenames of the selected images from the Edinburgh dataset was listed in list_edin.txt. (The Edinburgh dataset is a commercial library)
DOI: 10.6084/m9.figshare.23717763.v1
title: ScoutSL Artifacts

description: Artifacts for ScoutSL: Survey Responses and Offline Schema
DOI: 10.17632/bgyf8z4v69
title: A Comparative Study Between the Impact of Fertigation, Biofloc, and Aquaculture Wastewater Drip Irrigation on the Plant Growth, Essential Oil Yield and Composition of Lavandula dentata L. and Mentha Pulegium L. Under Greenhouse Conditions

description: The aim of this project was to assess the variation in growth, total phenolics, essential oil yield and composition in lavender and mint as affected by irrigation of different water qualities. The water quality treatments included T1: fertigation, T2: Biofloc wastewater, and T3: aquaculture wastewater. Data was collected at two cuts described as cut 1 and cut 2.