cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5683/sp3/179nyl
title: Adaptation to distinct habitats is maintained by contrasting selection at different life stages in sunflower ecotypes

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;&lt;span lang="EN"&gt;Conspecific populations living in adjacent but contrasting microenvironments represent excellent systems for studying natural selection. These systems are valuable because gene flow is expected to force genetic homogeneity except at loci experiencing divergent selection. A history of reciprocal transplant and common garden studies in such systems, and a growing number of genomic studies, have contributed to understanding how selection operates in natural populations. While selection can vary across different fitness components and life stages, few studies have investigated how this ultimately affects allele frequencies and the maintenance of divergence between populations. Here, we study two sunflower ecotypes in distinct, adjacent habitats by combining demographic models with genome-wide sequence data to estimate fitness and allele frequency change at multiple life stages. This framework allows us to estimate that only local ecotypes are likely to experience positive population growth&lt;/span&gt; &lt;span lang="EN"&gt;(λ&gt;1) and that the maintenance of divergent adaptation appears to be mediated via habitat- and life-stage-specific selection. We identify genetic variation, significantly driven by loci in chromosomal inversions, associated with different life history strategies in neighbouring ecotypes that optimize different fitness components and may contribute to the maintenance of distinct ecotypes. &lt;/span&gt;&lt;/p&gt;
description: &lt;b&gt;Methods&lt;/b&gt;&lt;br /&gt;&lt;p&gt;Full variant call format table for all filtered samples and SNPs as described in Goebl et al. 2022 (&lt;a href="https://doi.org/10.1111/mec.16785"&gt;https://doi.org/10.1111/mec.16785&lt;/a&gt;). &lt;/p&gt;
description: &lt;b&gt;Usage notes&lt;/b&gt;&lt;br /&gt;&lt;p&gt;This VCF table is an input file for the R code used to conduct the analyses presented in Goebl et al. 2022 (&lt;a href="https://doi.org/10.1111/mec.16785"&gt;https://doi.org/10.1111/mec.16785&lt;/a&gt;). The R code and other associated input files are located: &lt;a href="https://github.com/aprilgoebl/GSD_CodeAndFiles"&gt;https://github.com/aprilgoebl/GSD_CodeAndFiles&lt;/a&gt;&lt;/p&gt;
description: <b>Dryad version number:</b> 2
<b>Version status:</b> submitted
<b>Dryad curation status:</b> Published
<b>Sharing link:</b> https://datadryad.org/stash/share/jR5lKd_V1r3ads4eC5IcjXUbsba2TFGjx9DerTA8sQw
<b>Storage size:</b> 31556697
<b>Visibility:</b> public
DOI: 10.5683/sp3/xavfg0
title: Data from: The influence of human activity on predator-prey spatiotemporal overlap

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;Despite growing evidence of widespread impacts of humans on animal behavior, our understanding of how humans reshape species interactions remains limited. Here, we present a framework that draws on key concepts from behavioral and community ecology to outline four primary pathways by which humans can alter predator-prey spatiotemporal overlap. We suggest that predator-prey dyads can exhibit similar or opposite responses to human activity with distinct outcomes for predator diet, predation rates, population demography, and trophic cascades. We demonstrate how to assess these behavioral response pathways with hypothesis testing, using temporal activity data for 178 predator-prey dyads from published camera trap studies on terrestrial mammals. We found evidence for each of the proposed pathways, revealing multiple patterns of human influence on predator-prey activity and overlap. Our framework and case study highlight current challenges, gaps, and advances in linking human activity to animal behavior change and predator-prey dynamics. By using a hypothesis-driven approach to estimate the potential for altered species interactions, we can anticipate the ecological consequences of human activities on whole communities.&lt;/p&gt;
description: &lt;b&gt;Usage notes&lt;/b&gt;&lt;br /&gt;&lt;p&gt;Contains: Temporal activity and functional trait data for 178 predator-prey dyads from 19 published camera trap studies of terrestrial mammals in paired settings of high and low human use. For information on how this dataset was compiled and the included datatypes, please review the enclosed README.md and metadata files. Includes R scripts, which produced Figures 2 and 3 of the case study, to assess how human activity can influence predator-prey activity and overlap.&lt;/p&gt;
description: <b>Dryad version number:</b> 4
<b>Version status:</b> submitted
<b>Dryad curation status:</b> Published
<b>Sharing link:</b> https://datadryad.org/stash/share/-cMM6q7ywJGt_6dIn2LkC9rQ3kLjtTQcZqj0n0qMFaI
<b>Storage size:</b> 405776
<b>Visibility:</b> public
DOI: 10.5683/sp3/es2tlc
title: Supplemental material for: Effects of Echinacea purpurea supplementation on markers of immunity, health, intake, and growth of dairy calves

description: In this study we investigated how supplementing calves with Echinacea purpurea affects markers of immunity, health, intake, and growth.
DOI: 10.5683/sp3/szaljr
title: On the fast track: Hybrids adapt more rapidly than parental populations in a novel environment

description: &lt;b&gt;Abstract&lt;/b&gt;&lt;br/&gt;&lt;p&gt;Rates of hybridization are predicted to increase due to climate change and human activity that cause redistribution of species and bring previously isolated populations into contact. At the same time, climate change leads to rapid changes in the environment, requiring populations to adapt rapidly in order to survive. A few empirical cases suggest hybridization can facilitate adaptation despite its potential for incompatibilities and deleterious fitness consequences. Here we use simulations and Fisher’s Geometric model to evaluate the conditions and time frame of adaptation via hybridization in both diploids and haplodiploids. We find that hybrids adapt faster to new environments compared to parental populations in nearly all simulated scenarios, generating a fitness advantage that can offset intrinsic incompatibilities and last for tens of generations, regardless of whether the population was diploid or haplodiploid. Our results highlight the creative role of hybridization and suggest that hybridization may help contemporary populations adapt to the changing climate. However, adaptation by hybrids may well happen at the cost of reduced biodiversity, if previously isolated lineages collapse into one.&lt;/p&gt;
description: &lt;b&gt;Methods&lt;/b&gt;&lt;br /&gt;&lt;p&gt;This dataset contains a collection of &lt;span lang="EN"&gt;SLiM 3.6 &lt;/span&gt;&lt;span lang="EN"&gt;(Haller &amp; Messer, 2019) simulation scripts used for the paper "Kulmuni, Wiley, Otto. 2023. On the fast track: hybrids adapt more rapidly than parental populations in a novel environment".&lt;/span&gt;&lt;/p&gt;
description: &lt;b&gt;Usage notes&lt;/b&gt;&lt;br /&gt;&lt;p&gt;&lt;span lang="EN"&gt;SLiM 3.6 &lt;/span&gt;&lt;span lang="EN"&gt;(Haller &amp; Messer, 2019)&lt;/span&gt;&lt;/p&gt;
description: <b>Dryad version number:</b> 4
<b>Version status:</b> submitted
<b>Dryad curation status:</b> Published
<b>Sharing link:</b> https://datadryad.org/stash/share/wzGJ98XmmHAUEzoEbLsUIz_ebUfjszbgRsdFCCCisd8
<b>Storage size:</b> 16711119
<b>Visibility:</b> public
DOI: 10.5683/sp3/r6dwyi
title: Replication Data for: Neighborhood and the double burden of Disease in Ghana

description: This is a replication data for understanding the connections between neighborhoods and the double burden of chronic and infectious diseases in Ghana, Africa
DOI: 10.5683/sp3/gjav3c
title: Data for: Sexual Selection and the Non-random Union of Gametes: Retesting for Assortative Mating by Fitness in Drosophila melanogaster

description: While numerous theoretical population genetic models indicate that mating assortatively by genetic ‘quality’ in a species can enhance the efficiency of purging of deleterious mutations and/or the spread of beneficial alleles in the gene pool, empirical studies looking to quantify the extent of assortative mating by quality are surprisingly rare and largely inconclusive. Here, we set out to examine whether fruit flies (Drosophila melanogaster) engage in assortative mating by body-size phenotype, a composite trait strongly associated with both reproductive success and survival, and is considered a reliable indicator of natural genetic quality. Male and female flies of different body-size sizes classes (large and small) were obtained under the typical culture conditions to which they were adapted and placed into competitive reproductive conditions, so that their interactions and mating patterns could be measured. We found that flies engaged in assortative courting and mating behaviours and that they produced more offspring with similar sized individuals. Subsequent assays of offspring fitness indicated that assortative mating produced sons and daughters that had greater or equal reproductive success than those produced from disassortative mating. Together, these results validate theoretical predictions and demonstrate that assortative mating sexual selection can enhance the effects of natural selection and consequently the rate of adaptive evolution. The datasets archived here contain the observations on courtship rates, mating speeds, copulation durations, and offpring production that were obtained in our two sets of experiments.&lt;p&gt;&lt;p&gt;

The data represents the results of experiments examining behaviour and reproductive success of fruit flies, Drosophila melanogaster. They are saved in .csv format.
DOI: 10.5683/sp3/cscwt2
title: Raw data for Lactational performance of cows fed extruded flaxseed in commercial dairy herds

description: Raw data in XLSX format for the article "Lactational performance of cows fed extruded flaxseed in commercial dairy herds" published in Animal - Open Space
description: https://www.sciencedirect.com/journal/animal-open-space/
DOI: 10.5683/sp3/ldbrrw
title: Transcriptomic profiles of Pectoralis major muscles affected by spaghetti meat and woody breast in broiler chickens

description: FASTQC files of transcriptomic profiles of Pectoralis major muscles affected by spaghetti meat and woody breast in broiler chickens.
DOI: 10.5683/sp3/nezndo
title: Prolonged beta-lactams in pediatrics (Search strategies)
title: Infusion prolongée de beta-lactams en pédiatrie (Stratégies de recherches)

description: Ce jeu de données contient les stratégies de recherche pour PubMed, Medline (Ovid), Embase (Ovid), EBM reviews (Ovid), and Cinahl (Ebsco). Quand on les exécutent dans leur bases de données respectives, ces stratégies repêchent les articles sur, inclusivement, les concepts des infusions continues ou prolongées, des beta-lactams et de la prédiatrie (janvier 2023). Le nombre de résultat et les stratégies de recherche pour chaque base de données sont indiqués dans le fichier rtf. La date indiquée dans cette description est la date à laquelle la recherche a été effectuée. (2023-01-27)
Remarque : La recherche a été relancée en novembre 2023 pour trouver les nouveaux articles parus entre janvier 2023 et novembre 2023.
DOI: 10.5683/sp3/4fomjf
title: Carbon biogeochemistry of major rivers in northern Québec [summer 2010 snapshot]
title: Biogéochimie du carbone des principales rivières du Nord-du-Québec [été 2010]

description: This includes biogeochemical data of 23 major rivers draining the northern Québec. Each river has been sampled once in summer 2010, and sampling sites were distributed (whenever possible) along the river channel with one station on an upper reach, one in the middle and another at or close to the river mouth or for some rivers, only in the mouth. For each site, data were recorded on date, geographic location, water physical and chemical conditions, watershed and terrain properties recovered using GIS system (e.g. land use cover, rock type and soil type), gas fluxes measurements for carbon dioxide and methane, and concentrations of several constituents of the total carbon (total, particulate, dissolved, organic and inorganic, isotopic composition), nutrients (total phosphorus and total nitrogen) and suspended particles.
description: The file contains the following variables and units of measurement: 
Annual streamflow from precipitation -evapotranspiration (m3/s), Mean Slope (degree), Mean Altitude (m) Depth (m), Water Temperature (ºC), Dissolved oxygen - saturation (%), Dissolved oxygen (mg/L), pH, Average wind speed (m/s), Catchment area (km2), Total Aquatic cover (%), River cover (%), Vegetation cover (%), Wetland cover (%), Brunisolic (%), Podzolic (%), Organic soil (%), Regosolic (%), Intrusive rocks (%), Metamorphic rocks (%), Volcanic rocks (%), Sedimentary rocks (%), total organic carbon - TOC (mg/L), dissolved organic carbon - DOC (mg/L), total inorganic carbon - TIC (mg/L), dissolved inorganic carbon - DIC (mg/L), particulate organic carbon - POC (mg/L), particulate inorganic carbon- PIC (TIC-DIC, mg/L), total phosphorus - TP (ug/L), total nitrogen - TN (mg/L), Total Suspended Particles (mg/L), Δ14C-DOC (‰), δ13C-DOC (‰), pCO2 (ppm), pCH4 (ppm), CO2 Flux chamber (mgC/m2/d), CH4 Flux chamber (mgC/m2/d), CO2 TBL (Thin Boundary Layer method) method (mgC/m2/d1), CH4 TBL method (mgC/m2/d1).
DOI: 10.5683/sp3/3crgnk
title: Données pour l'article intitulé "Noise exposure of cyclists in Ho Chi Minh City: a spatio-temporal analysis using non-linear models"
title: Data for the article entitled "Noise exposure of cyclists in Ho Chi Minh City: a spatio-temporal analysis using non-linear models"

description: Données sur l'exposition au bruit à Ho Chi Minh Ville (Vietnam)
DOI: 10.5683/sp3/u6wcfl
title: Données pour l'article intitulé "Modelling cyclists’ multi-exposure to air and noise pollution with low-cost sensors—The case of Paris"
title: Data for the article entitled "Modelling cyclists’ multi-exposure to air and noise pollution with low-cost sensors—The case of Paris"

description: Données sur l'exposition au dioxyde d'azote et au bruit des cyclistes à Paris
DOI: 10.5683/sp3/1zlyha
title: Données pour l'article intitulé "Cyclists’ exposure to air and noise pollution, comparative approach in seven cities"
title: Data for the article entitled "Cyclists’ exposure to air and noise pollution, comparative approach in seven cities"

description: Données sur l'exposition au bruit et au dioxyde d'azote dans sept villes à travers le monde (Copenhague, Paris, Lyon, Montréal, Toronto, Mumbai, Delhi).
DOI: 10.5683/sp3/4v8dcw
title: Replication Data and Code for: Followers of the Pied Piper of Pensioners

description: The data and programs replicate tables and figures from "Followers of the Pied Piper of Pensioners", by Cuevas, Bernhardt, and Sanclemente. Please see the ReadMe file for additional details.
DOI: 10.5683/sp3/p3ou3a
title: Data from: Overlooked risks and opportunities in groundwatersheds of the world’s protected areas

description: &lt;strong&gt; This repository consists of: &lt;/strong&gt; &lt;br&gt;
1. A GeoTIFF (.tif) of groundwater-dependent ecosystem (GDE) types at 30 arcsecond resolution, globally &lt;br&gt;
2. A GeoTIFF (.tif) of groundwatershed extents for GDEs within protected areas, derived globally at 30 arcsecond resolution &lt;br&gt;
3. A GeoPackage (.gpkg) containing vector polygons of all contiguous protected areas included in the study with key summary statistics provided in the attribute data &lt;br&gt; 
4. An archive of the scripts used to perform all analysis, also located at the GitHub repository: https://github.com/XanderHuggins/groundwatersheds-for-PAs &lt;br&gt;
5. A ReadMe file &lt;br&gt; 
&lt;br&gt;

&lt;strong&gt; Associated paper's abstract: &lt;/strong&gt; &lt;br&gt;
Protected areas are a key tool for conserving biodiversity, sustaining ecosystem services and improving human well-being. Global initiatives that aim to expand and connect protected areas generally focus on controlling ‘above ground’ impacts such as land use, overlooking the potential for human actions in adjacent areas to affect protected areas through groundwater flow. Here, we assess the potential footprint of these impacts by mapping groundwatersheds for the world’s protected areas. We find that 85% of protected areas with groundwater-dependent ecosystems have groundwatersheds that are underprotected, meaning that some portion of the groundwatershed lies outside of the protected area. Half of all protected areas have a groundwatershed with a spatial footprint that lies mostly (i.e., at least 50%) outside of the protected area’s boundary. These findings highlight a widespread potential risk to protected areas from activities affecting groundwater outside protected areas, underscoring the need for groundwatershed-based conservation and management measures. Delineating groundwatersheds can catalyze needed discussions about protected area connectivity and robustness, and groundwatershed conservation and management can help protect groundwater-dependent ecosystems from external threats.
description: Scripts used to produce data are archived in this repository and are also available on GitHub at: https://github.com/XanderHuggins/groundwatersheds-for-PAs
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<strong> **Click Tree View below to display file structure** </strong>
DOI: 10.5683/sp3/lpmovh
title: Replication Data for: The differential precession of Earth's fluid and solid cores

description: codes and files to reproduce all results
DOI: 10.5683/sp3/7xmik8
title: Penetrative Superplumes in the Mantle of Large Super-Earth Planets: A Possible Mechanism for Active Tectonics in the Massive Super-Earths

description: Data for:
Penetrative Superplumes in the Mantle of Large Super-Earth Planets: A Possible Mechanism for Active Tectonics in the Massive Super-Earths
DOI: 10.5683/sp3/itrl0v
title: Supplemental data for: Comparison of established and novel insecticides on survival and reproduction of Folsomia candida

description: In this study, the effects of six insecticides including two neonicotinoids (thiamethoxam, clothianidin), a diamide (cyantraniliprole), a ketoenol (spirotetramat), a pyridine (flonacamid), and a butanolide (flupyradifurone) on the survival and reproduction of the parthenogenic collembolan species Folsomia candida were investigated and compared. The raw data from this study has been deposited in their data repository. The neonicotinoids, the diamide, and the butanolide were found to have the most significant impact on survival and reproduction, while less significant effects and in some cases no effect on survival and reproduction were reported in the ketoenol and pyridine insecticides at the concentrations tested. All significant impacts were reported at concentrations below expected environmental concentrations of the active ingredients investigated in agricultural soils.
description: The file contains the raw data from Bill Martin's study on a comparison of established and novel insecticides on survival and reproduction of Folsomia candida.
DOI: 10.5683/sp3/ub9p9p
title: Horak and Vanhooren - "Somebody to Lean On" - supplementary materials

description: Appendices for "Somebody to Lean On: Community Ties, Social Exchange, and Practical Help During the COVID-19 Pandemic" - published in City & Community
DOI: 10.5683/sp3/0uv835
title: Supplemental figure and table for: How benchmarking motivates colostrum management practices on dairy farms: a realistic evaluation

description: This study used realistic evaluation to determine how and in which circumstances providing farmers with benchmark data can motivate improved colostrum management practices. The supplementary material consists of a figure and table that were used by veterinarians in the study to deliver benchmark data to their farmers. The interview guide and an additional table on the realistic evaluation method is also provided.
DOI: 10.5683/sp3/v7iteh
title: High-resolution diffusion-weighted imaging at 7 Tesla: single-shot readout trajectories and their impact on signal-to-noise ratio, spatial resolution and accuracy

description: Reconstructed raw diffusion-weighted MR images, fractional anisotropy (FA) and intracellular volume fraction (ICVF) maps of in-vivo scans as described in the article 'High-resolution diffusion-weighted imaging at 7 Tesla: single-shot readout trajectories and their impact on signal-to-noise ratio, spatial resolution and accuracy'.
DOI: 10.5683/sp3/czzjbi
title: Questionnaire for: Burn or Balm?: Exploring University Students’ Experiences With Social Media During the COVID-19 Pandemic

description: This questionnaire consists of questions administered in an online survey that explores the impact on perceived burnout experiences among Canadian university students from the intensification of social media use during the earliest phase of the COVID-19 pandemic. Questions include frequency and perceived purpose of social media use as well as the types of social media platforms.&lt;p&gt;&lt;p&gt;

The file documents the questions administered in the survey, which include multiple choice and short answer questions as well as a matrix table.
DOI: 10.5683/sp3/teliyd
title: Do you get what you see? Insights of using mAP to select architectures of pretrained neural networks for automated aerial animal detection.

description: Underlying datasets of the paper "Do you get what you see? Insights of using mAP to select architectures of pretrained neural networks for automated aerial animal detection."
It contains two training and validation sets of images of red deer and their COCO style annotations json files.
DOI: 10.5683/sp3/aznnwa
title: Census of Population, 2016 [Canada]: Highlight Tables

description: &lt;p&gt;Highlight Tables provide information highlights by topic via key indicators for various levels of geography. Highlight Tables are available for the following topics:&lt;/p&gt;
&lt;ul&gt;
&lt;li&gt;Aboriginal peoples&lt;/li&gt;
&lt;li&gt;Age and sex&lt;/li&gt;
&lt;li&gt;Education&lt;/li&gt;
&lt;li&gt;Families, households and marital status&lt;/li&gt;
&lt;li&gt;Housing&lt;/li&gt;
&lt;li&gt;Immigration and ethnocultural diversity&lt;/li&gt;
&lt;li&gt;Income&lt;/li&gt;
&lt;li&gt;Labour&lt;/li&gt;
&lt;li&gt;Language&lt;/li&gt;
&lt;li&gt;Population and dwelling counts&lt;/li&gt;
&lt;li&gt;Type of dwelling&lt;/li&gt;
&lt;/ul&gt;
description: Census of Population
DOI: 10.5683/sp3/laeq5l
title: SARS-CoV-2 Seroprevalence in Canada
title: Seroprevalence estimates from over 20 serosurveillance studies

description: This dataset contains population level infection-acquired and vaccine-induced seroprevalence estimates stratified by geography (Canada or by province), social determinants and age group. Data were compiled from over 20 research studies collaborating with the CITF. Trends in SARS-CoV-2 seroprevalence owing to infection and vaccination were then estimated by geographical region using a time-series approach. The analysis was conducted using a Bayesian framework and generalized linear multilevel models for β-binomial distributed outcomes.
DOI: 10.5683/sp3/wnivgo
title: Census of Population, 2021 [Canada]: Highlight Tables [B2020 & CSV]

description: &lt;p&gt;Highlight tables provide information highlights by topic via key indicators for various levels of geography. Highlight tables are available for the following topics:&lt;/p&gt;
&lt;ul&gt;
&lt;li&gt;Population and dwelling counts&lt;/li&gt;
&lt;li&gt;Historical population and dwelling counts&lt;/li&gt;
&lt;/ul&gt;
description: Census of Population
DOI: 10.5683/sp3/v8oz4r
title: Census of Population, 2021 [Canada]: Census Profile [B2020 & CSV]

description: This profile presents information from the 2021 Census of Population for various levels of geography, including provinces and territories, census metropolitan areas and census tracts.
description: Census of Population