cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/a8kqx-ygx45
title: Chloroflexi

description: Raw data files of Chloroflexi
description: <strong>Tilt Series Date:</strong> 2017-12-22</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Chloroflexi</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -5.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2017-12-22-7/rawdata/</p>Pos4_pt15.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2017-12-22-7/rawdata/Pos4_pt15.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pos4_pt15_full.rec,  Reconstruction (Pixel Size 1.92 nm), 355.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2017-12-22-7/3dimage_91495/Pos4_pt15_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/8my27-d9g57
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2016-05-24</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-05-24-39/rawdata/</p>1007_10009.mrc,  Tilt Series (Pixel Size 0.41 nm), 861.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-05-24-39/rawdata/1007_10009.mrc"
        > <i class="download icon"></i> Download </a></p>

        1007_10009_part121_12.rec,  Reconstruction (Pixel Size 1.64 nm), 78.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-05-24-39/3dimage_74990/1007_10009_part121_12.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/9kyra-vsb46
title: Chloroflexi

description: Raw data files of Chloroflexi
description: <strong>Tilt Series Date:</strong> 2017-12-21</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Chloroflexi</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -3.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2017-12-21-1/rawdata/</p>atlas3_1.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2017-12-21-1/rawdata/atlas3_1.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas3_1_part61_2.rec,  Reconstruction (Pixel Size 1.28 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2017-12-21-1/3dimage_91465/atlas3_1_part61_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/pckkz-wvv81
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2016-05-24</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-05-24-4/rawdata/</p>tomograpy_10004.mrc,  Tilt Series (Pixel Size 0.41 nm), 861.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-05-24-4/rawdata/tomograpy_10004.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomograpy_10004_full.rec,  Reconstruction (Pixel Size 1.64 nm), 78.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-05-24-4/3dimage_74929/tomograpy_10004_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/4cvw1-6cn59
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2016-05-24</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-05-24-16/rawdata/</p>tomograpy_10016.mrc,  Tilt Series (Pixel Size 0.41 nm), 861.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-05-24-16/rawdata/tomograpy_10016.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomograpy_10016_full.rec,  Reconstruction (Pixel Size 1.64 nm), 78.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-05-24-16/3dimage_74948/tomograpy_10016_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.5281/zenodo.16910282
title: Dataset of eddy-like coherent sets discussed in "Unraveling the influence of short-lived, three-dimensional, eddy-like, coherent, oceanic structures on phytoplankton dynamics and nutrient transport"

description: Raw data and plot data (Fig.4 & 6) of eddy-like coherent sets (ELCS) E1 and E2 and their corresponding reference boxes discussed in manuscript

"Unraveling the influence of short-lived, three-dimensional, eddy-like, coherent, oceanic structures on phytoplankton dynamics and nutrient transport"

Data are based on

MODELOUT from ROMS-BioOptic Model:

Cahill, B. E., Kowalczuk, P., Kritten, L., Gräwe, U., Wilkin, J., & Fischer, J. (2023, Jul). Estimating the seasonal impact of optically significant water constituents on surface heating rates in the western Baltic Sea.Biogeosciences, 20 (13), 2743–2768. doi: 10.5194/bg-20-2743-2023

Cahill, B., Chrysagi, E., Vortmeyer-Kley, R., & Gräwe, U.(2024, March).Deconstructing co-occurring marine heatwave and phytoplankton Bloom events in the Arkona Sea in 2018.Frontiers in Marine Science, 11. doi: 10.3389/fmars.2024.1323271

 

Detailed description of data structure in Readme_RawdataE1E2.txt
DOI: 10.5281/zenodo.16910283
title: Dataset of eddy-like coherent sets discussed in "Unraveling the influence of short-lived, three-dimensional, eddy-like, coherent, oceanic structures on phytoplankton dynamics and nutrient transport"

description: Raw data and plot data (Fig.4 & 6) of eddy-like coherent sets (ELCS) E1 and E2 and their corresponding reference boxes discussed in manuscript

"Unraveling the influence of short-lived, three-dimensional, eddy-like, coherent, oceanic structures on phytoplankton dynamics and nutrient transport"

Data are based on

MODELOUT from ROMS-BioOptic Model:

Cahill, B. E., Kowalczuk, P., Kritten, L., Gräwe, U., Wilkin, J., & Fischer, J. (2023, Jul). Estimating the seasonal impact of optically significant water constituents on surface heating rates in the western Baltic Sea.Biogeosciences, 20 (13), 2743–2768. doi: 10.5194/bg-20-2743-2023

Cahill, B., Chrysagi, E., Vortmeyer-Kley, R., & Gräwe, U.(2024, March).Deconstructing co-occurring marine heatwave and phytoplankton Bloom events in the Arkona Sea in 2018.Frontiers in Marine Science, 11. doi: 10.3389/fmars.2024.1323271

 

Detailed description of data structure in Readme_RawdataE1E2.txt
DOI: 10.22002/6gt98-7ee13
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2016-03-11</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -11.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-03-11-28/rawdata/</p>tomography60003.mrc,  Tilt Series (Pixel Size 0.48 nm), 861.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-03-11-28/rawdata/tomography60003.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography60003_part121_53.rec,  Reconstruction (Pixel Size 1.92 nm), 111.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-03-11-28/3dimage_73710/tomography60003_part121_53.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1xx3d-53864
title: Chloroflexi

description: Raw data files of Chloroflexi
description: <strong>Tilt Series Date:</strong> 2016-05-23</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Chloroflexi</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2016-05-23-11/rawdata/</p>FF_Mont40003.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2016-05-23-11/rawdata/FF_Mont40003.mrc"
        > <i class="download icon"></i> Download </a></p>

        FF_Mont40003_part121_3.rec,  Reconstruction (Pixel Size 2.4 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2016-05-23-11/3dimage_74903/FF_Mont40003_part121_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/gpwdz-5af84
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2017-05-19</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-52.0°, 52.0°), step: 2.0°, constant angular increment, dosage: 190.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2017-05-19-4/rawdata/</p>11b0002.mrc,  Tilt Series (Pixel Size 0.42 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2017-05-19-4/rawdata/11b0002.mrc"
        > <i class="download icon"></i> Download </a></p>

        11b0002_part53_2.rec,  Reconstruction (Pixel Size 0.42 nm), 1.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2017-05-19-4/3dimage_84652/11b0002_part53_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/eftrp-py818
title: Adipocyte Cell

description: Raw data files of Adipocyte Cell
description: <strong>Tilt Series Date:</strong> 2016-04-06</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> Primary adipocyte cells</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -5.0 μm,  magnification: 41000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-04-06-3/rawdata/</p>tomography3.mrc,  Tilt Series (Pixel Size 2.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-04-06-3/rawdata/tomography3.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography3_part121_11.rec,  Reconstruction (Pixel Size 10.4 nm), 1.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2016-04-06-3/3dimage_74912/tomography3_part121_11.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/96r3y-zr490
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2016-05-24</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-05-24-36/rawdata/</p>1007_10006.mrc,  Tilt Series (Pixel Size 0.41 nm), 861.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-05-24-36/rawdata/1007_10006.mrc"
        > <i class="download icon"></i> Download </a></p>

        1007_10006_full.rec,  Reconstruction (Pixel Size 1.64 nm), 78.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-05-24-36/3dimage_74993/1007_10006_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/txek0-zpf57
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2016-03-11</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -11.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at s://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-03-11-27/rawdata/</p>tomography60002.mrc,  Tilt Series (Pixel Size 0.48 nm), 861.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-03-11-27/rawdata/tomography60002.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomography60002_part121_22.rec,  Reconstruction (Pixel Size 1.92 nm), 111.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-03-11-27/3dimage_73715/tomography60002_part121_22.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/kdbpc-x8498
title: Escherichia coli

description: Raw data files of Escherichia coli
description: <strong>Tilt Series Date:</strong> 2015-03-21</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> MG1655 sacculi</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2015-03-21-13/rawdata/</p>032115_purified_actomyosin0013.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2015-03-21-13/rawdata/032115_purified_actomyosin0013.mrc"
        > <i class="download icon"></i> Download </a></p>

        032115_purified_actomyosin0013_full.rec,  Reconstruction (Pixel Size 1.92 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2015-03-21-13/3dimage_53302/032115_purified_actomyosin0013_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/a86vm-pb593
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2017-06-23</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1.0°, constant angular increment, dosage: 190.0 eV/Å²,  defocus: -10.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2017-06-23-5/rawdata/</p>1tgt1.mrc,  Tilt Series (Pixel Size 0.42 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2017-06-23-5/rawdata/1tgt1.mrc"
        > <i class="download icon"></i> Download </a></p>

        1tgt1_part111_6.rec,  Reconstruction (Pixel Size 0.42 nm), 1.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2017-06-23-5/3dimage_87147/1tgt1_part111_6.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.jqj7gn
title: Occurrence Download

description: A dataset containing 79 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lissachatina fulica",
 "Country is Kenya",
 "HasCoordinate is true"
 ]
}

 The dataset includes 79 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033255-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bm3mbf
title: Occurrence Download

description: A dataset containing 1168 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus arkansana"
 ]
}

 The dataset includes 1168 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033254-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/dp67a-kbs22
title: COS-7 expressing HIV-1 Gag

description: Raw data files of COS-7 expressing HIV-1 Gag
description: <strong>Tilt Series Date:</strong> 2015-08-06</p>
<strong>Data Taken By:</strong> Shrawan kumar Mageswaran</p>
<strong>Species / Specimen:</strong> Cos7</p>
<strong>Strain:</strong> Cos7 cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 80.0 eV/Å²,  defocus: -8.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> IMOD</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2015-08-06-30/3dimage_60199/</p>GDgrid_atlas1_HIV_COS7par0026_full.rec,  Reconstruction (Pixel Size 2.4 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2015-08-06-30/3dimage_60199/GDgrid_atlas1_HIV_COS7par0026_full.rec"
        > <i class="download icon"></i> Download </a></p>

        GDgrid_atlas1_HIV_COS7par0026.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/smk2015-08-06-30/rawdata/GDgrid_atlas1_HIV_COS7par0026.mrc"
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DOI: 10.22002/mawsx-akb97
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2016-06-18</p>
<strong>Data Taken By:</strong> Qing Yao</p>
<strong>Species / Specimen:</strong> Unspecified</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-55.0°, 55.0°), step: 1.0°, constant angular increment, dosage: 190.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-06-18-25/rawdata/</p>square50005.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-06-18-25/rawdata/square50005.mrc"
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        square50005_part111_5.rec,  Reconstruction (Pixel Size 1.92 nm), 311.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/qya2016-06-18-25/3dimage_75889/square50005_part111_5.rec"
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