cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29082745.v1
title: The circadian rhythm of HIFα protein expression in the brain of <i>Procambarus clarkii</i>

description: Cells possess homeostatic mechanisms to regulate functions under stressful conditions. Among these mechanisms is the hypoxia-inducible factor (HIF). We aimed to characterize the expression of the HIFα protein in the crayfish brain, a putative pacemaker in this species, to determine if it exhibits a rhythm. Crayfish <i>Procambarus clarkii</i> were acclimated to a 12:12 light–dark cycle (LD 12:12), while others were kept in constant darkness (DD) for an additional 72 hours, in both conditions, being killed at six time points. The brains were processed by western blot using a primary anti-HIF-1α antibody. Under LD, HIFα levels showed no significant daily variations. However, COSINOR analysis showed a bimodal rhythm. In the DD condition, significant differences were observed revealed a circadian rhythm. Our findings demonstrate that HIFα in the crayfish brain exhibits a circadian rhythm, suggesting its role as a master regulator in the circadian system feedback loop of the of these animals.
DOI: 10.6084/m9.figshare.30095984
title: Energy balance of the Antarctic tunicate <i>Salpa thompsoni</i> Foxton

description: In early austral autumn of 2002, <i>Salpa thompsoni</i> feeding rates and growth were assessed by incubation salps with two C<sup>14</sup>-labeled cultures of green algae <i>Dunaliella maritima</i> and <i>Platymonas viridis</i>. Daily carbon ingestion rates of blastozooids within the mass range of 0.9–28.3 mgC ind<sup>.−1</sup> ranged from 2.8 to 60.3% of body carbon mass and were the function of the experimental food concentration nearly regardless of the individual salp mass. The absolute growth of salps was positively related to the salp size ranging from 0.64 to 6.50 µgC ind<sup>.−1</sup>day<sup>−1</sup> and from 0.02 to 1.56 µgC ind<sup>.−1</sup>day<sup>−1</sup> in oozooids and blastozooids, respectively. The linear individual length increase ranged from 0.33 to 1.93 mm day<sup>−1</sup> and from 0.29 to 0.85 mm day<sup>−1</sup> in blastozooids and oozooids. The mass-specific metabolic values (filtration, ingestion and growth) of salps under experimental conditions depend on food concentrations and the salp biomass, but weakly on their size.
DOI: 10.6084/m9.figshare.30095984.v1
title: Energy balance of the Antarctic tunicate <i>Salpa thompsoni</i> Foxton

description: In early austral autumn of 2002, <i>Salpa thompsoni</i> feeding rates and growth were assessed by incubation salps with two C<sup>14</sup>-labeled cultures of green algae <i>Dunaliella maritima</i> and <i>Platymonas viridis</i>. Daily carbon ingestion rates of blastozooids within the mass range of 0.9–28.3 mgC ind<sup>.−1</sup> ranged from 2.8 to 60.3% of body carbon mass and were the function of the experimental food concentration nearly regardless of the individual salp mass. The absolute growth of salps was positively related to the salp size ranging from 0.64 to 6.50 µgC ind<sup>.−1</sup>day<sup>−1</sup> and from 0.02 to 1.56 µgC ind<sup>.−1</sup>day<sup>−1</sup> in oozooids and blastozooids, respectively. The linear individual length increase ranged from 0.33 to 1.93 mm day<sup>−1</sup> and from 0.29 to 0.85 mm day<sup>−1</sup> in blastozooids and oozooids. The mass-specific metabolic values (filtration, ingestion and growth) of salps under experimental conditions depend on food concentrations and the salp biomass, but weakly on their size.
DOI: 10.5281/zenodo.17093878
title: Dataset for Modelling Vietnam's Transport Sector: Population, Economy, Transport Activity, Energy Efficiency, Load Capacity, and Carbon Emission

description: The rapid growth of Vietnam’s transport sector presents challenges for sustainable energy planning, particularly due to rising fuel consumption and associated carbon emissions. To help address these challenges, this paper presents a comprehensive dataset designed to support modelling of future transport demand, energy use, and CO2 emissions in Vietnam. The dataset covers population, GDP, passenger and freight activity, vehicle stock, energy efficiency, load capacity, and CO2 factors across nine transport modes: motorcycles, cars, buses, light-duty vehicles, heavy-duty vehicles, rail, inland waterways, maritime, and air. These are further disaggregated into nine fuel types: petrol, diesel, compressed natural gas, electricity, biofuel, fuel oil, hydrogen, ammonia, and jet fuel. Data were compiled from national statistics, government reports, online databases, academic journals, and media sources. Structured for use with open-source modelling tools, the dataset supports analyses of transport demand and carbon accounting, offering researchers, policymakers, and consultants a resource to evaluate long-term decarbonisation pathways and inform evidence-based policymaking.
DOI: 10.15468/dl.uyjvvh
title: Occurrence Download

description: A dataset listing the 7 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllostomus hastatus"
 ]
}

 The dataset's 7 records were derived from 228 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049720-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p9046yos
title: Field Data for an Evaluation of Sensors for Continuous Monitoring of Harmful Algal Blooms in the Finger Lakes Region, New York, 2018 - 2020

description: This U.S. Geological Survey (USGS) data release contains meteorological, water temperature, light (photosynthetically active radiation and illumination), and multichannel fluorescence sensor data from the Finger Lakes Region of New York, during the fall of 2018 and the summer and fall of 2019 and 2020. It also includes all sensor data and associated discrete sample data, at the near surface (top), mid-depth (middle) and near bottom (bottom) depths. Data were collected from three Advanced Monitoring Pilot study platforms in open water at Seneca Lake (USGS station number 425027076564401), Owasco Lake (USGS station number 425327076313601), and Skaneateles Lake (USGS station number 425606076251601) in 2018 and 2019, and in Seneca Lake and Owasco Lake in 2020.

The dataset includes laboratory-measured chlorophyll-a, nitrate plus nitrite, dissolved organic carbon, biovolume of cyanobacteria, biovolume of green/brown algae, biovolume of phycoerythrin-containing phytoplankton, biovolume of other phytoplankton, biovolume of total phytoplankton, and sensor-measured chlorophyll concentration from cyanobacteria, chlorophyll concentration from mixed phytoplankton, total chlorophyll concentration, chlorophyll concentration from green/brown algae, percent green/brown algae, percent cyanobacteria, percent mixed phytoplankton, dissolved organic matter relative fluorescence, fluorescent dissolved organic matter concentration, water temperature, specific conductance, dissolved oxygen, pH, chlorophyll relative fluorescence, fluorescent chlorophyll concentration, phycocyanin relative fluorescence, fluorescent phycocyanin concentration, orthophosphate, turbidity, nitrate plus nitrite, illumination, wind speed and direction, air temperature, precipitation and photosynthetically active radiation.
DOI: 10.15468/dl.t9dpu7
title: Occurrence Download

description: A dataset containing 112 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "TaxonKey is Rhynchosia reticulata"
 ]
}

 The dataset includes 112 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049753-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nwhn8w
title: Occurrence Download

description: A dataset containing 1335 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is one of (CHN.17_1, CHN.11_1, CHN.18_1, CHN.19_1)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ranidae"
 ]
}

 The dataset includes 1335 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049757-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17093865
title: Forty-five words denoting a source of artificial lighting, collected from French literature 1838-1928

description: Terms used to denote lighting sources and technologies, extracted by traditional reading and annotation of ninety works of French literature.

Supports the overall project: 'Can automatic reading be close? On the implications of using a Large Language Model to identify interactions between lighting and emotions in nineteenth-century French literature' (see Community page).
DOI: 10.5281/zenodo.17093866
title: Forty-five words denoting a source of artificial lighting, collected from French literature 1838-1928

description: Terms used to denote lighting sources and technologies, extracted by traditional reading and annotation of ninety works of French literature.

Supports the overall project: 'Can automatic reading be close? On the implications of using a Large Language Model to identify interactions between lighting and emotions in nineteenth-century French literature' (see Community page).
DOI: 10.15468/dl.uyq3jj
title: Occurrence Download

description: A dataset containing 478 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Carapichea affinis"
 ]
}

 The dataset includes 478 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049755-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tahz6f
title: Occurrence Download

description: A dataset containing 45470 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hipposideros"
 ]
}

 The dataset includes 45470 records from 194 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049758-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y4bpbc
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Distichodus brevipinnis)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 33 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049760-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15363589
title: Toward a Comprehensive Grid of Cepheid Models with MESA II. Uncertainties of the Elemental Abundances of Intermediate-Mass Stars.

description: MESA (version r.21.12.1 with MESA SDK 22.6.1) files used for the article: Toward a Comprehensive Grid of Cepheid Models with MESA II. Uncertainties of the Elemental Abundances of Intermediate-Mass Stars. submitted to ApJShistory_columns_cep.list - list of columns in history.data filesprofiles_columns_cep.list - list of columns in profile.data filesLOGS_res_A.tar.gz - full reference tracks with profiles (for kippenhahn diagrams); without overshootLOGS_res_A_ov.tar.gz - full reference tracks with profiles (for kippenhahn diagrams); with overshoottracks_SET.tar.gz - short evolutionary tracks without overshooting (MESA history.data files)tracks_SET_ov.tar.gz - short evolutionary tracks with main sequence core overshooting (MESA history.data files)dataforfigs.tar.gz:- fig5 - additional LOGS with dense profiles for fig.5     - LOGS_5_0.014     - LOGS_5_0.014_conv_B     - LOGS_5_0.014_MS     - LOGS_5_0.014_conv_B_MS

for fig.3- LOGS_5_0.014_A09_res_A - models with T_mixing_limit=1d6- LOGS_5_0.014_A09_res_A0 - models with T_mixing_limit=0for fig. 7- LOGS_6_0.004_A09_conv_C- LOGS_6_0.004_A09_res_Atables.tar.gz - surface and central abundances with and without overshoot; for 8 benchamark points
DOI: 10.15468/dl.ukqnyf
title: Occurrence Download

description: A dataset containing 3040 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Murina"
 ]
}

 The dataset includes 3040 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049762-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mrebey
title: Occurrence Download

description: A dataset containing 310 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "TaxonKey is Castilleja talamancensis"
 ]
}

 The dataset includes 310 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049763-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17082201
title: Examples of applying a multivariate Wilson prior to comparative crystallography data

description: This folder contains four examples of merging crystallographic intensities with a bivariate prior:



time-resolved Laue crystallography of the photoactive yellow protein

anomalous diffraction from serial XFEL crystallography of thermolysin

anomalous diffraction from Laue crystallography of NaI-soaked lysozyme

fragment screening monochromatic data of Nsp3 Mac1


Additionally, we provide several auxilliary examples:



For PYP, an example where we set aside a test fraction to semi-independently optimize the double-Wilson r

for lysozyme, two examples, one where we use Laue-DIALS instead of precognition, and another where we set aside the first 90 images to semi-independently optimize the double-Wilson r

For thermolysin, an example where we use a bivariate versus a univariate prior as the number of scaled images grows, and another where we set aside the first 395 images to semi-independently optimize the double-Wilson r


Every example includes scripts to run Careless as well as to analyze the outputs in order to reproduce the figures in the double-Wilson manuscript. For every example, there is a `README.md` that describes the contents of each example folder.
DOI: 10.15468/dl.4t5hj4
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rosa chinensis",
 "Country is Australia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 18 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049764-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13019729
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.u38783
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rosa chinensis",
 "Country is Austria",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049765-250827131500795/datasets/export for details.
DOI: 10.15468/dl.76mfqr
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rosa chinensis",
 "Country is Belgium",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049766-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6ytwnk
title: Occurrence Download

description: A dataset containing 176723 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lampyridae",
 "Year 1650-2025"
 ]
}

 The dataset includes 176723 records from 1213 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049631-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ck5zku
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astragalus dumanii Ekící & Aytac"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028803-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kpyjcb
title: Occurrence Download

description: A dataset containing 432 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Obovaria retusa (Lamarck, 1819)"
 ]
}

 The dataset includes 432 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030669-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eubuyd
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Colombia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Octopoda"
 ]
}

 The dataset includes 78 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224411-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.drahbv
title: Occurrence Download

description: A dataset containing 33859 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Observation",
 "Country is Germany",
 "OccurrenceStatus is Present",
 "Year 2007-2021"
 ]
}

 The dataset includes 33859 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0074259-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p3cazh
title: Occurrence Download

description: A dataset containing 206 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Azima sarmentosa (Blume) Benth. & Hook.fil."
 ]
}

 The dataset includes 206 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033397-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aaupaz
title: Occurrence Download

description: A dataset containing 20519 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "Year 1992-2017",
 "Geometry POLYGON((-30.88828 35.25021,31.99574 34.12607,27.51539 80.87026,-11.79512 80.62119,-27.10336 63.64142,-30.88828 35.25021))",
 "TaxonKey is Sus scrofa Linnaeus, 1758",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 20519 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030670-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8gusdz
title: Occurrence Download

description: A dataset containing 2153 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Azima tetracantha Lam."
 ]
}

 The dataset includes 2153 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033404-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.moazbj
title: Occurrence Download

description: A dataset containing 52 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mozambique",
 "TaxonKey is Polysphaeria Hook.f."
 ]
}

 The dataset includes 52 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030670-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wnn92r
title: Occurrence Download

description: A dataset containing 1290 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ruellia tuberosa L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1290 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015844-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-44612
title: Redemption tidings, vol. 14, nos. 1-26, 1 Jan. - 16 Dec. 1938

description: [description english/roman)] Issued fortnightly (every two weeks). "A full gospel magazine for all believers" -- subtitle. Includes Tidings from our missionaries in each issue (1 Jan. - 16 Dec. 1938) except vol. 14, no. 21.
DOI: 10.15468/dl.9wasrs
title: Occurrence Download

description: A dataset containing 102075 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Barbastella barbastellus (Schreber, 1774))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 102075 records from 1294 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069141-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s7j7vm
title: Occurrence Download

description: A dataset containing 214 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Specimen"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lepus arcticus Ross, 1819",
 "Year 1960-2022"
 ]
}

 The dataset includes 214 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0188261-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.