cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7289/v53x84kn
title: The NOAA and MMS Marine Minerals Bibliography

description: From 1983 through 1992, the National Oceanic and Atmospheric Administration (NOAA) National Geophysical Data Center (NGDC) compiled a comprehensive, computerized bibliography of offshore marine mineral deposits as a cooperative effort with the Ocean Minerals and Energy Division of the NOAA National Ocean Service, and the Office of International Activities and Marine Minerals (INTERMAR) of the Minerals Management Service (MMS). In October of 1992, the NOAA and MMS Marine Minerals Bibliography (MMBIB) was released as a compact disc.
 The bibliography includes over 17,000 citations of references to sea floor deposits of ferromanganese (polymetallic) nodules and crusts, placers/heavy minerals, phosphorites, and polymetallic sulfides published from 1831 through 1990. References include key word categories indicating geographic area and type of study conducted. Subject key words are annotated with "general" or "technical" to indicate whether a subject was mentioned briefly, or was explored in detail. Key words also include the names of each mineral and each element mentioned in the article. Geographic keys include ocean or sea name, numeric designators for the ocean/sea, the name of any pertinent geographic feature, US exclusive economic zones (e.g. East Coast), and geologic setting.
 The NOAA and MMS Marine Minerals CD-ROM Data Set, produced by NGDC and partially funded by INTERMAR, contains the entire NGDC Marine Minerals Bibliography and Geochemical Database and several data files compiled by other organizations. The bibliography is searchable on-line on NGDC's web server. 
 The NOAA and MMS Marine Minerals Bibliography and geochemical database was incorporated by the International Seabed Authority (ISA) into their online compilation, which uses the NGDC MMBIB identification system for references.
DOI: 10.7289/v57p8w90
title: VIIRS Climate Raw Data Record (C-RDR) from Suomi NPP, Version 1

description: The Suomi NPP Climate Raw Data Record (C-RDR) developed at the NOAA NCDC is an intermediate product processing level (NOAA Level 1b) between a Raw Data Record (RDR) and a Sensor Data Record (SDR). The C-RDR is intended to simplify access to the raw data for the purpose of reprocessing using calibration and geolocation methods. The Visible Infrared Imaging Radiometer Suite (VIIRS) C-RDR has raw VIIRS measurements collected into time series variables, accompanied by the coefficients and tables needed to convert them to science units and calibrate them. Where applicable, metadata in this file follows the Climate and Forecast (CF) Conventions and Attribute Convention for Dataset Discovery (ACDD). Metadata attributes from the native Suomi NPP RDR and SDR file types are also included. These files have been compared with those generated using JPSS Application Development Library (ADL) applications. Product documentation and software are available for the dataset.
DOI: 10.7289/v5mw2f2p
title: EMAG2: Earth Magnetic Anomaly Grid (2-arc-minute resolution)

description: EMAG2 is a global Earth Magnetic Anomaly Grid compiled from satellite, ship, and airborne magnetic measurements. It is a significant update of our previous candidate grid for the World Digital Magnetic Anomaly Map. The resolution has been improved from 3 arc-minutes to 2 arc-minutes, and the altitude has been reduced from 5 km to 4 km above the geoid. Additional grid and track line data have been included, both over land and the oceans. Wherever available, the original shipborne and airborne data were used instead of precompiled oceanic magnetic grids. Interpolation between sparse track lines in the oceans was improved by directional gridding and extrapolation, based on oceanic crustal age model. The longest wavelengths (&gt;330 km) were replaced with the latests CHAMP satellite magnetic field model MF6.
DOI: 10.25921/p7j8-2170
title: Cooperative Observer Program (COOP) Hourly Precipitation Data (HPD), Version 2

description: The Cooperative Observer Program (COOP) Hourly Precipitation Data (HPD) consists of quality controlled precipitation amounts, which are measurements of hourly accumulation of precipitation, including rain and snow for approximately 2,000 observing stations around the country, and several U.S. territories in the Caribbean and Pacific from the National Weather Service (NWS) Fischer-Porter Network. This new version of COOP HPD with faster automations due updated stations will result in faster access for the public. The data are from 1940 to present, depending upon when each station was installed. These stations, nearly all of which were part of HPD version 1, also known as DSI-3240, were gradually upgraded from paper punch tape data recording systems to a more modern electronic data logger system from 2004-2013.

The 15-min gauge depth time series are processed at NCEI via automated quality control and filtering algorithms to identify and remove spurious observations from noise and malfunctioning equipment, and also those due to natural phenomena such as evaporation and the necessary occasional emptying of the gauge. Hourly precipitation totals are then computed from the 15-min data and are quality controlled by a suite of automated algorithms that combine checks on the daily and hourly time scale. Data and metadata are ingested on a daily basis and combined in a single integrated dataset. 

As with the legacy punch paper instrumentation, the electronic loggers record rain gauge depth every 15 minutes. Monthly site visits to each station are still performed, but instead of collecting punched paper (that would subsequently need conversion to a digital record via a MITRON reader), data are downloaded from the station's datalogger to a memory stick and centrally collected at the local Weather Forecast Office (WFO) for all stations in the WFO area. The WFO subsequently combines all data into a single tar file and transfers the data to NCEI via ftp upload nominally each month. 

This updated HPD includes the historical data from the punch paper era and the recent digital era in order to provide the full period of record for each location. These data are formatted consistent with practices for NCEI Global In-situ datasets.
DOI: 10.25921/ae96-0e57
title: NOAA Climate Data Record (CDR) of AVHRR Polar Pathfinder Extended (APP-X) Cryosphere, Version 2

description: NOAA Climate Data Record (CDR) of the eXtended AVHRR Polar Pathfinder (APP-X) cryosphere contains 19 geophysical variables over the Arctic and Antarctic for the period 1982 - present. All of them have undergone various degrees of validation, though not all are considered CDR quality. The variables are (those considered by the developers to be CDR-quality are identified with an asterisk): Surface temperature, all-sky, snow, ice, and land* Surface albedo, all-sky* Sea ice thickness* Surface type Cloud mask* Cloud particle thermodynamic phase Cloud optical depth Cloud particle effective radius Cloud temperature Cloud pressure Cloud type Downwelling shortwave radiation at the surface* Downwelling longwave radiation at the surface* Upwelling shortwave radiation at the surface* Upwelling longwave radiation at the surface* Upwelling shortwave radiation at the TOA* Upwelling longwave radiation at the TOA* Shortwave cloud radiative forcing at the surface Longwave cloud radiative forcing at the surface APP-x data products are mapped to a 25 km EASE grid at two local solar times: 04:00 and 14:00 for the Arctic, and 02:00 and 14:00 for the Antarctica. Using local solar time rather than standard UTC times provides better information on diurnal differences at all locations. The latest update to version 2 includes folding in the APP FCDR updates (updated calibration coefficients for AVHRR GAC visible channels) along with improved algorithms for the land mask, cloud mask, and ice thickness.
DOI: 10.6084/m9.figshare.24459550
title: mcrA gene amplicon classification and distribution across lake sediment samples

description: Amplicon libraries were prepared as described in Han <i>et al</i>. 2020 (https://doi.org/10.1111/1462-2920.15115) and involved the same <i>mcr</i>A primer combination as for qPCR. Sequencing was done on an Illumina MiSeq (Illumina Inc.). Raw sequence reads were quality-checked by <i>FastQC</i>, read ends trimmed using <i>seqtk</i>, paired end reads merged into amplicons by <i>FLASH</i>, primer sites trimmed by <i>usearch</i>, and quality filtering was done by <i>prinseq</i>. Zero-radius Operational Taxonomic Units (ZOTUs) were generated using UNOISE3 and clustered using a 97% similarity threshold to generate OTUs. OTUs were taxonomically identified based on neighbor-joining phylogenetic trees in ARB. This mcrA database used for classification contained &gt;2,400 high-quality <i>mcrA </i>sequences from a wide range of published amplicon and whole-genome sequencing studies with manually optimized sequence alignments (https://doi.org/10.3389/fmicb.2023.1192029).
DOI: 10.6084/m9.figshare.24459550.v1
title: mcrA gene amplicon classification and distribution across lake sediment samples

description: Amplicon libraries were prepared as described in Han <i>et al</i>. 2020 (https://doi.org/10.1111/1462-2920.15115) and involved the same <i>mcr</i>A primer combination as for qPCR. Sequencing was done on an Illumina MiSeq (Illumina Inc.). Raw sequence reads were quality-checked by <i>FastQC</i>, read ends trimmed using <i>seqtk</i>, paired end reads merged into amplicons by <i>FLASH</i>, primer sites trimmed by <i>usearch</i>, and quality filtering was done by <i>prinseq</i>. Zero-radius Operational Taxonomic Units (ZOTUs) were generated using UNOISE3 and clustered using a 97% similarity threshold to generate OTUs. OTUs were taxonomically identified based on neighbor-joining phylogenetic trees in ARB. This mcrA database used for classification contained &gt;2,400 high-quality <i>mcrA </i>sequences from a wide range of published amplicon and whole-genome sequencing studies with manually optimized sequence alignments (https://doi.org/10.3389/fmicb.2023.1192029).
DOI: 10.6084/m9.figshare.24459571
title: SQL queries used to search the functional annotation tables for genes indicative of specific metabolisms

description: SQL queries used to search the functional annotation tables for genes indicative of specific metabolisms. Based on the queries one can trace back which annotations (EC numbers, IMG annotation text, Pfam motives etc.) were considered indicative of a hypothetical function of encoded proteins.
DOI: 10.6084/m9.figshare.24459571.v1
title: SQL queries used to search the functional annotation tables for genes indicative of specific metabolisms

description: SQL queries used to search the functional annotation tables for genes indicative of specific metabolisms. Based on the queries one can trace back which annotations (EC numbers, IMG annotation text, Pfam motives etc.) were considered indicative of a hypothetical function of encoded proteins.
DOI: 10.15468/dl.39b67w
title: Occurrence Download

description: A dataset containing 83787 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lithobates catesbeianus (Shaw, 1802)",
 "Year 2000-2024"
 ]
}

 The dataset includes 83787 records from 204 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020315-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uj9u6j
title: Occurrence Download

description: A dataset containing 71814 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lymantria dispar Linnaeus, 1758",
 "Year 2000-2024"
 ]
}

 The dataset includes 71814 records from 585 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020318-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6eh4dc
title: Occurrence Download

description: A dataset containing 309 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ursinia nudicaulis (Thunb.) N.E.Br."
 ]
}

 The dataset includes 309 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131302-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7ze2kf
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Draba koeiei Rech.f."
 ]
}

 The dataset includes 20 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035197-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zwd2tg
title: Occurrence Download

description: A dataset containing 123758 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-71.0469765800000062 42.2305893999999995, -71.0469765800000062 42.2449921199999991, -71.0469765800000062 42.2572344299999969, -71.0469765800000062 42.2694767400000018, -71.0469765800000062 42.2845996000000000, -71.0469765800000062 42.3026029999999977, -71.0311590499999994 42.3026029999999977, -71.0167805699999946 42.3026029999999977, -70.9937750099999931 42.3026029999999977, -70.9772397699999971 42.3026029999999977, -70.9592666799999989 42.3026029999999977, -70.9492005299999988 42.3026029999999977, -70.9492005299999988 42.2954016400000015, -70.9492005299999988 42.2809989200000018, -70.9492005299999988 42.2723572900000022, -70.9492005299999988 42.2586747000000003, -70.9492005299999988 42.2464323900000025, -70.9492005299999988 42.2305893999999995, -70.9592666799999989 42.2305893999999995, -70.9743640699999929 42.2305893999999995, -70.9858668499999936 42.2305893999999995, -71.0009642499999956 42.2305893999999995, -71.0189373399999937 42.2305893999999995, -71.0318779699999965 42.2305893999999995, -71.0469765800000062 42.2305893999999995))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 123758 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0118183-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yffcvu
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-25.45277 67.17108,-31.96734 38.6907,-21.19324 25.32748,-13.92699 25.16044,-10.00154 33.6795,-1.73304 36.1851,11.21258 38.2731,12.96651 34.9323,30.83982 33.34542,42.53263 35.85102,43.11728 49.04721,33.34542 53.89138,33.59598 72.85045,-25.45277 67.17108))",
 "TaxonKey is Aedes koreicus (Edwards, 1917)",
 "Year 2000-2020"
 ]
}

 The dataset includes 83 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072247-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.63z4us
title: Occurrence Download

description: A dataset containing 3540 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bixa orellana L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3540 records from 248 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0141416-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6jmums
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Draba japonica Maxim."
 ]
}

 The dataset includes 95 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035136-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n2cju3
title: Occurrence Download

description: A dataset containing 2901 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stemonaceae"
 ]
}

 The dataset includes 2901 records from 125 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072265-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.69tcdh
title: Occurrence Download

description: A dataset containing 2236 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is one of (India, China, Bangladesh)",
 "Geometry POLYGON((87.05514 21.28494,90.31713 21.49027,92.94644 20.20584,94.01931 21.85293,95.03933 23.09197,96.30865 24.99595,97.98596 26.49193,98.54507 28.68302,96.94331 29.92211,94.96378 30.85899,91.27671 30.97988,87.63497 31.25851,82.08926 30.92607,81.77193 30.23097,83.63057 29.00698,84.7393 26.36693,84.81971 25.0321,84.98053 23.82593,86.05804 22.37853,87.05514 21.28494))",
 "HasCoordinate is true",
 "IucnRedListCategory is DD"
 ]
}

 The dataset includes 2236 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035130-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dx3mky
title: Occurrence Download

description: A dataset containing 111 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astrocaryum malybo H.Karst."
 ]
}

 The dataset includes 111 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0123979-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4mkswa
title: Occurrence Download

description: A dataset containing 293 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Accipiter griseiceps (Kaup, 1848)"
 ]
}

 The dataset includes 293 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035145-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xu8g8e
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Pristimantis orestes (Lynch, 1979)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 34 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008806-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2fgjzw
title: Occurrence Download

description: A dataset containing 47461 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Melittidae"
 ]
}

 The dataset includes 47461 records from 180 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100303-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hcf3zs
title: Occurrence Download

description: A dataset containing 1743 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Carpornis melanocephala (Wied-Neuwied, 1820)"
 ]
}

 The dataset includes 1743 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035165-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j3rdvn
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Verbascum scabridum (Skan) Hub.-Mor."
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131303-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gk4zjl
title: Occurrence Download

description: A dataset containing 27748 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Herbarium Senckenbergianum (GLM) - Bryophyta"
 ]
}

 The dataset includes 27748 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008806-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p2xt36
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Draba jiulongensis Al-Shehbaz"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035147-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ad9xez
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elaeocarpus medioglaber Gagnep."
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035146-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.smkmu3
title: Occurrence Download

description: A dataset containing 27108 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Museu Paraense Emílio Goeldi - Ophidia Collection"
 ]
}

 The dataset includes 27108 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0091139-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sf8gst
title: Occurrence Download

description: A dataset containing 4421 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argemone mexicana L.",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4421 records from 231 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0141420-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.