cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/vp4x223gvg.1
title: Evaporation of levitating microdroplets containing nanoparticles: luminescent Gd2O3:Er3+, TiO2, polystyrene; illumination with 806 nm laser from below

description: Microdroplets of suspension were levitated in a linear quadrupole trap and studied similarly as described e.g. in Y. Shopa et al., JQSRT 296 (2023), but illumination with an 806 nm diode laser (CW, ~1.5 W), which excited luminescence by up-conversion, was provided (vertically) from below. In 2023, its polarization was s+p (~45deg) and from the beginning of 2024, it was p. In some experiments, the droplet was additionally illuminated with a 512 nm diode laser with p polarisation. The suspended phase consisted of nanoparticles of Gd2O3:Er3+ of several concentrations, and for comparison, polystyrene of 1 micrometer diameter and TiO2 of 100 nm diameter. The continuous phase consisted of diethylene (2EG), triethylene (3EG), and tetraethylene (4EG) glycols. The data is divided into the folders correspondingly. Two groups of spectral lines were (usually) visible (green (stronger) and red). We followed the temporal evolution of several selected lines, both in luminescence and in scattering at right angle (usually 538, 548, 553, 562, 633, 654, 661, 675, 682, 783, 806 nm): files *-Spectra.csv, where * (in hh_mm_ss format) always denotes the time of measurement file creation. Simultaneously the shadow image of the droplet was recorded (non-coherent light, 633 nm LED) - in some cases, a movie: *_Shadow-*.avi is provided. The droplet radius was measured by fitting an ellipse to the shadow edge. The ellipse parameters temporal evolution are stored in *-Shadow.pdf files: time, mean diameter (mean of the ellipse axes), long axis rotation, X and Y of the centre, long and short axis, border length, X and Y of “the centre of mass” of the border, fitting error. The microdroplet's vertical position was stabilised with a DC field. The corresponding voltage variation and other stabilisation system parameters are stored in *.csv files: KeyStab: 0 – stabilisation off, 2 – on, k_PID – proportionality parameter of the software voltage regulator, freq – trapping AC field frequency. In some cases, partially concurrently light was collected at a right angle with a PMT for the green 512 or 806 nm laser. The photon count rate is stored in *-CRM.csv files. Time stored in corresponding files was synchronised. In-focus movies (see readme.txt for details) of the evaporating microdroplet were recorded for certain experiments to illustrate its evolution – no synchronisation is available. It must be kept in mind that the observed image is for the most part laser speckle. The "Laser on/off" pertains to the 806 nm laser. Further details can be found in the readme.txt files in the corresponding folder. (No)_th_spectrum.csv represents the ith recorded spectrum from the corresponding experiment. The parameters of the Gd2O3:Er3+ samples can be found in the .pptx files.
DOI: 10.15468/dl.2x789p
title: Occurrence Download

description: A dataset containing 4014 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Acanthoscelides obtectus (Say, 1831), Amaranthus deflexus L., Amaranthus retroflexus L., Artemisia verlotiorum Lamotte, Beta vulgaris subsp. maritima (L.) Thell., Bos taurus Linnaeus, 1758, Bromus catharticus Vahl, Bruchus pisorum Linnaeus, 1758, Bruchus rufimanus Boheman, 1833, Buddleja davidii Franch., Calendula officinalis L., Callosobruchus chinensis (Linnaeus, 1758), Capra pyrenaica victoriae Cabrera, 1911, Castanea sativa Mill., Celtis australis L., Columba livia J.F.Gmelin, 1789, Conyza canadensis (L.) Cronquist, Conyza sumatrensis (S.F.Blake) Pruski & G.Sancho, 2006, Cydalima perspectalis (Walker, 1859), Cymbalaria muralis G.Gaertn., B.Mey. & Scherb., Dama dama (Linnaeus, 1758), Entoleuca mammata (Wahlenb.) J.D.Rogers & Y.M.Ju, Equisetum palustre L., Equus asinus Linnaeus, 1758, Equus ferus caballus Linnaeus, 1758, Ficus carica L., Galinsoga ciliata (Raf.) S.F.Blake, Genetta genetta (Linnaeus, 1758), Helianthus tuberosus L., Hypoponera punctatissima (Roger, 1859), Impatiens balfourii Hook.fil., Iris ×germanica L., 372635684, Lasius neglectus Van Loon, Boomsma & Andrasfalvy, 1990, Lepidium virginicum L., Leptinotarsa decemlineata (Say, 1824), Leptoglossus occidentalis Heidemann, 1910, Lunaria annua L., Marmota marmota (Linnaeus, 1758), Matricaria discoidea DC., Monochamus sutor (Linnaeus, 1758), Mustela vison Schreber, 1777, Oenothera biennis L., Ondatra zibethicus (Linnaeus, 1766), Ovis aries musimon (Pallas, 1811), Ovis gmelini Linnaeus, 1758, Oxalis latifolia Kunth, Oxalis vallicola (Rose ex Small) R.Knuth, Pentarthrum confine Broun, 1881, Pinus pinaster Aiton, Pseudoperonospora cubensis (Berk. & M.A.Curtis) Rostovzev, Robinia pseudoacacia L., Senecio inaequidens DC., Solanum lycopersicum L., Sus scrofa Linnaeus, 1758, BOLD:ABV3227, Vespa velutina Lepeletier, 1836, Perdix perdix (Linnaeus, 1758), Phasianus colchicus Linnaeus, 1758, Phoxinus phoxinus (Linnaeus, 1758))",
 "Country is Andorra",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 },
 "HasCoordinate is true"
 ]
}

 The dataset includes 4014 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004217-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/w8gcg9yfmj.1
title: LINF_350022800

description: DNA polymerase epsilon subunit b; Leishmania infantum (strain JPCM5)
DOI: 10.17632/5x98jhc9mp.1
title: Enzymatic wound debridement

description: Enzymatic debridement consists of the progressive elimination of denatured or necrotic tissue from wounds carried out by topically applied enzymes.
DOI: 10.17632/dv254rzpth.1
title: Data of effects of extreme temperatures on expressed sentiment using social media

description: The data including climate and expressed sentiment data as well as code used to deal with them.
DOI: 10.17632/sdvpm9mf6m.4
title: Data for granulometric, geochemical and authigenic 10Be/9Be geochronological analysis of Upper Miocene outcrops in the Turiec Basin, Western Carpathians (Central Europe)

description: The presented data include specification of samples taken from the outcrops of Upper Miocene strata, present in the Turiec Basin (Western Carpathians, Central Europe). The samples underwent granulometric analysis by sieving and laser diffraction and geochemical analysis by X-ray fluorescence, ICP-ES and ICP-MS. Moreover, the samples were subject to geochronological analysis by authigenic 10Be/9Be dating, and the provided sheets include all input data, which were acquired during sample processing, ICP-MS measurements of beryllium concentrations and AMS measurements of 10Be/9Be ratios, which ultimately served for calculation of natural authigenic 10Be/9Be ratios. The concentration of beryllium, iron and manganese in the authigenic phase was analyzed by ICP-MS.
DOI: 10.17632/sdvpm9mf6m.1
title: Data for granulometric, geochemical and authigenic 10Be/9Be geochronological analysis of Upper Miocene outcrops in the Turiec Basin, Western Carpathians (Central Europe)

description: The presented data include specification of samples taken from the outcrops of Upper Miocene strata, present in the Turiec Basin (Western Carpathians, Central Europe). The samples underwent granulometric analysis by sieving and laser diffraction and geochemical analysis by X-ray fluorescence, ICP-ES and ICP-MS. Moreover, the samples were subject to geochronological analysis by authigenic 10Be/9Be dating, and the provided sheets include all input data, which were acquired during sample processing, ICP-MS measurements of beryllium concentrations and AMS measurements of 10Be/9Be ratios, which ultimately served for calculation of natural authigenic 10Be/9Be ratios.
DOI: 10.17632/sdvpm9mf6m.2
title: Data for granulometric, geochemical and authigenic 10Be/9Be geochronological analysis of Upper Miocene outcrops in the Turiec Basin, Western Carpathians (Central Europe)

description: The presented data include specification of samples taken from the outcrops of Upper Miocene strata, present in the Turiec Basin (Western Carpathians, Central Europe). The samples underwent granulometric analysis by sieving and laser diffraction and geochemical analysis by X-ray fluorescence, ICP-ES and ICP-MS. Moreover, the samples were subject to geochronological analysis by authigenic 10Be/9Be dating, and the provided sheets include all input data, which were acquired during sample processing, ICP-MS measurements of beryllium concentrations and AMS measurements of 10Be/9Be ratios, which ultimately served for calculation of natural authigenic 10Be/9Be ratios. The concentration of beryllium, iron and manganese in the authigenic phase was analyzed by ICP-MS.
DOI: 10.17632/sdvpm9mf6m.3
title: Data for granulometric, geochemical and authigenic 10Be/9Be geochronological analysis of Upper Miocene outcrops in the Turiec Basin, Western Carpathians (Central Europe)

description: The presented data include specification of samples taken from the outcrops of Upper Miocene strata, present in the Turiec Basin (Western Carpathians, Central Europe). The samples underwent granulometric analysis by sieving and laser diffraction and geochemical analysis by X-ray fluorescence, ICP-ES and ICP-MS. Moreover, the samples were subject to geochronological analysis by authigenic 10Be/9Be dating, and the provided sheets include all input data, which were acquired during sample processing, ICP-MS measurements of beryllium concentrations and AMS measurements of 10Be/9Be ratios, which ultimately served for calculation of natural authigenic 10Be/9Be ratios. The concentration of beryllium, iron and manganese in the authigenic phase was analyzed by ICP-MS.
DOI: 10.17632/sdvpm9mf6m.5
title: Data for stratigraphic, granulometric, geochemical and authigenic 10Be/9Be geochronological analysis of Upper Miocene outcrops in the Turiec Basin, Western Carpathians (Central Europe)

description: The presented data support the paper Šujan et al. (2023) Palaeogeography, Palaeoclimatology, Palaeoecology 628, 111746. It include depiction of raw borehole profiles in geological sections, sedimentological data from outcrops and specification of samples taken from the outcrops of Upper Miocene strata, present in the Turiec Basin (Western Carpathians, Central Europe). The samples underwent granulometric analysis by sieving and laser diffraction and geochemical analysis by X-ray fluorescence, ICP-ES and ICP-MS. Moreover, the samples were subject to geochronological analysis by authigenic 10Be/9Be dating, and the provided sheets include all input data, which were acquired during sample processing, ICP-MS measurements of beryllium concentrations and AMS measurements of 10Be/9Be ratios, which ultimately served for calculation of natural authigenic 10Be/9Be ratios. The concentration of beryllium, iron and manganese in the authigenic phase was analyzed by ICP-MS.
DOI: 10.17632/xbr7msczds.1
title: Data for: Biodesulfurization of landfill biogas by a pilot-scale bioscrubber: operational limits and microbial analysis

description: This dataset supports the article "Biodesulfurization of landfill biogas by a pilot-scale bioscrubber: operational limits and microbial analysis" published in the journal Environmental Research. 
https://doi.org/10.1016/j.envres.2024.118164. Received 28 October 2023; Received in revised form 7 January 2024; Accepted 8 January 2024
DOI: 10.17632/4sncvxbn6x.1
title: In-situ SAXS and XRD of SBA-15 in a Diamond Anvil Cell during high-pressure densification

description: This dataset contains 1D Small Angle X-ray Scattering (SAXS) and 1D X-Ray Diffraction (XRD) patterns for a mixture of gold particles and SBA-15. SBA-15 is a type of periodic mesoporous amorphous silica. The SAXS data has ordered reflection peaks from the SBA-15 mesopore lattice. The XRD data has the First Sharp Diffraction Peak (FSDP) from the SBA-15 and diffraction peaks from the gold particles, particularly the gold [111] reflection which was used to calibrate pressure. The data was measured in-situ in a Diamond Anvil Cell (DAC) during compression, under pressures ranging from ~0-5 GPa. Hydrostatic data was measured when the sample cell was filled with a Pressure Transmitting Medium (PTM) of 4 methanol : 1 ethanol. Uniaxial (i.e., non-hydrostatic) data was measured when the sample cell was filled with only ambient air as the PTM. The SAXS dataset shows the SBA-15 P6mm mesoporous lattice shrinking and becoming increasing disordered during compression. The XRD dataset shows the shift in the FSDP during compression (as well as the shift in the gold [111] reflection). Data is first categorized by which experiment it was a part of; SAXS and XRD data were collected simultaneously so all the hydrostatic data represents a single experiment and all the uniaxial data represents a different single experiment. Data is next categorized by whether it is SAXS or XRD data. Lastly, data is categorized by what pressure it was taken at; XRD/SAXS data labeled with the same pressure was taken at the same DAC pressure setting. README txt files explain the dataset file formats and where the data was collected.

This work was supported by the UC Lab Fees Fellowship from University of California Research Initiatives (Contract No. LGF-20-652903); and by the U.S. Department of Energy through the Los Alamos National Laboratory. Los Alamos National Laboratory is operated by Triad National Security, LLC, for the National Nuclear Security Administration of U.S. Department of Energy (Contract No. 89233218CNA000001). Portions of this work were performed at HPCAT (Sector 16), Advanced Photon Source (APS), Argonne National Laboratory. HPCAT operations are supported by DOE-NNSA’s Office of Experimental Sciences. The Advanced Photon Source is a U.S. Department of Energy (DOE) Office of Science User Facility operated for the DOE Office of Science by Argonne National Laboratory under Contract No. DE-AC02-06CH11357.
DOI: 10.15468/dl.qknhy3
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is The Coleoptera collection (EC) of the Muséum national d'Histoire naturelle (MNHN - Paris)",
 "Geometry POLYGON((-61.2686 14.33636,-60.76541 14.33636,-60.76541 14.97057,-61.2686 14.97057,-61.2686 14.33636))"
 ]
}

 The dataset includes 38 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004218-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/93hgsjz5sv.1
title: Smart utilization of betaine lipids in the giant clam Tridacna crocea

description: Datasets for "Smart utilization of betaine lipids in the giant clam Tridacna crocea" .
DOI: 10.17632/xkjp4nm33h.2
title: Single-Molecule Tracking dataset for histone H3 (Hht1) in yeast Saccharomyces cerevisiae

description: This dataset contains raw time-lapse movies acquired for tracking histone H3 (Hht1) in Saccharomyces cerevisiae. The histone H3 (HHT1) was C-terminally tagged with -HaloTag and sparsely labeled with HaloTag ligand (JF646-HTL). To identify the nuclear boundaries, GFP-LacI-NLS (Nuclear Localization Sequence) was expressed. The cells were grown to log phase in SC media, labeled with JF646-HTL, and imaged under the Highly Inclined and Laminated Optical Sheet (HILO) microscope with a pixel size of 117 nm. Time-lapse movies were acquired (with a 647 nm laser) at three different time intervals (15 ms, 200 ms, and 1000 ms). After each time-lapse movie, a single image was captured with a 488 nm laser to generate images for nuclear boundaries. These movies were tracked using three different MATLAB-based software packages (MatlabTrack, TrackIt, and DiaTrack (Sojourner and Spot-On)) to extract various biophysical parameters of histone H3 dynamics, such as mean squared displacement plot, diffusion coefficient, bound fraction, residence time, jump distances and jump angles. This dataset also contains tracked files from all three software packages, so users can use those files as examples to learn how to process the data and what to expect from the tracked files. The histone H3 is generally used as a gold standard for chromatin-bound molecules in live-cell single-molecule imaging. The raw timelapse movies provided can be used with any other tracking software to compare the performance of various tracking algorithms for single-molecule tracking.
DOI: 10.17632/xkjp4nm33h.1
title: Single-Molecule Tracking dataset for histone H3 (Hht1) in yeast Saccharomyces cerevisiae

description: This dataset contains raw time-lapse movies acquired for tracking histone H3 (Hht1) in Saccharomyces cerevisiae. The histone H3 (HHT1) was C-terminally tagged with -HaloTag and sparsely labeled with HaloTag ligand (JF646-HTL). To identify the nuclear boundaries, GFP-LacI-NLS (Nuclear Localization Sequence) was expressed. The cells were grown to log phase in SC media, labeled with JF646-HTL, and imaged under the Highly Inclined and Laminated Optical Sheet (HILO) microscope with a pixel size of 117 nm. Time-lapse movies were acquired (with a 647 nm laser) at three different time intervals (15 ms, 200 ms, and 1000 ms). After each time-lapse movie, a single image was captured with a 488 nm laser to generate images for nuclear boundaries. These movies were tracked using three different MATLAB-based software packages (MatlabTrack, TrackIt, and DiaTrack (Sojourner and Spot-On)) to extract various biophysical parameters of histone H3 dynamics, such as mean squared displacement plot, diffusion coefficient, bound fraction, residence time, jump distances and jump angles. This dataset also contains tracked files from all three software packages, so users can use those files as examples to learn how to process the data and what to expect from the tracked files. The histone H3 is generally used as a gold standard for chromatin-bound molecules in live-cell single-molecule imaging. The raw timelapse movies provided can be used with any other tracking software to compare the performance of various tracking algorithms for single-molecule tracking.
DOI: 10.17632/7m86twnzp2.1
title: Dataset: Genome-wide phylogeography reveals cryptic speciation in a circumglobal planktonic calcifier: Limacina bulimoides

description: 1. Modifications to DNA extraction and target capture protocols for assessing genome-wide variation in a global dataset of the pteropod Limacina bulimoides
2. VCF file for hard-filtered target capture dataset of 161 L. bulimoides (for all analyses except SNAPP phylogeny)
3. VCF file for hard-filtered target capture dataset of 161 L. bulimoides and 11 L. trochiformis (for SNAPP phylogeny)
4. Bed file of coordinates of Target capture probes that where &gt;80% of the probe was mapped with coverage &gt;15X
DOI: 10.17632/2765cw9jmx.1
title: LINF_190014600

description: CAP-Gly domain containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/dv254rzpth.2
title: Data of effects of extreme temperatures on expressed sentiment using social media

description: The data including climate and expressed sentiment data as well as code used to deal with them.
DOI: 10.17632/453w8xyr7c.1
title: LINF_190013700

description: ATG8/AUT7/APG8/PAZ2 | Autophagy-related protein; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.7kvtgu
title: Occurrence Download

description: A dataset containing 149 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Greece, Türkiye, Cyprus)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Phoenix theophrasti Greuter"
 ]
}

 The dataset includes 149 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004219-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/zbbrbzrdtd.3
title: Generative Adversarial Networks Enable Outlier Detection and Property Monitoring for Additive Manufacturing of Complex Structures [dataset]

description: Microstructure dataset utilized in "Generative Adversarial Networks Enable Outlier Detection and Property Monitoring for Additive Manufacturing of Complex Structures, Engineering Applications of Artificial Intelligence, DOI: 10.1016/j.engappai.2024.108993, October 2024":
- lattice structures in folders lattice_structures and lattice_structures_defective were employed in Section 3.1
- spherical voids in folders spherical_voids and spherical_voids_perturbed were employed in Section 3.2

The lattice structures are extracted from the CT scans in "Image-based numerical characterization and experimental validation of tensile behavior of octet-truss lattice structures" (https://doi.org/10.1016/j.addma.2021.101949)
DOI: 10.17632/9phf69mt8d.1
title: Datasets for genomic signals of adaptation along a natural CO2 gradient over striking microgeographic scale

description: Genpop file obtained using 2b-RADseq which comprises a total of 14,881 loci for 74 individuals of the black sea urchin Arbacia lixula. The individuals were collected along a natural CO2 gradient from the island of La Palma in the Canary Archipelago, Spain.
DOI: 10.17632/6v44y5gy62.1
title: Solidification microstructure and mechanical properties of an Al-11wt.%Si alloy modified with Nb and Sb: Thermal profiles of the alloys

description: Thermal profiles of the Al-11wt.%Si, Al-11wt.%Si-0.1wt.%Sb, and Al-11wt.%Si-0.04wt.%Nb alloys directionally solidified under nonsteady-state.
DOI: 10.17632/4vjvbvk94f.1
title: Changes in adult well-being and economic inequalities: An exploratory observational longitudinal study (2002-2010) of micro-level trends among Tsimane’, a small-scale rural society of Indigenous People in the Bolivian Amazon

description: The dataset contains the two Stata V17 files on which the article in World Development (2014) with the same title as the dataset is based. It also includes the Stata computer codes (do files) and a one-page Word document on how to run the datasets