cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15181380
title: UIBAIFED - Artificial Intelligence Facial Expression Dataset

description: UIBAIFED, a novel facial expression dataset designed to enhance Facial Expression Recognition (FER) by providing high-quality, realistic images labeled with detailed demographic attributes, including age group, gender, and ethnicity. Unlike existing datasets, UIBAIFED incorporates a fine-grained classification of 22 micro-expressions, based on the universal facial expressions defined by Ekman and the micro-expression taxonomy proposed by Gary Faigin. The dataset was generated using Stable Diffusion and validated through a convolutional neural network (CNN), achieving an accuracy of 82% in expression classification. The results highlight the dataset’s reliability and potential to improve FER systems. UIBAIFED fills a critical gap in the field by offering a more comprehensive labeling system, enabling future research on expression recognition across different demographic groups and advancing the robustness of FER models in diverse applications.
DOI: 10.15468/dl.86kj8c
title: Occurrence Download

description: A dataset containing 115856 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gyps africanus Salvadori, 1865"
 ]
}

 The dataset includes 115856 records from 89 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013527-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48511/9riddzv4
title: McDonald Creek Hydrometric (MCKMCD01H)

description: This dataset contains hydrometric and water temperature data for McDonald Creek hydrometric station. This site is part of the Living Lakes Canada Columbia Basin Water Monitoring Framework program (CBWMF). The CBWMF is a coordinated monitoring network that tracks how climate change and other impacts are affecting water supply for communities and ecosystems across the Canadian Columbia Basin region. McDonald Creek was selected for monitoring because it is an important stream for fish. There are few active stations in the Lower Arrow Lakes valley, so this monitoring supports improved geographic coverage of the network. The data is being collected to track climate change and other impacts on Columbia Basin water supply and to support community climate adaptation.
DOI: 10.6084/m9.figshare.28605500.v1
title: NCR1_Compiled-CDS-Sequences

description: File 1, Compiled CDS sequences of NCR1 in Homo sapien, eight selected non-human primates, and outgroup Rattus rattus. CDS sequences were found using Ensembl to BLAST the Homo sapien NCR1 sequence against chosen primates, including Papio anubis, Pan troglodytes, and Macaca mulatta.
DOI: 10.6084/m9.figshare.28605662
title: File_3-NCR1_Compiled_Aligned-AA-Sequences

description: File 3, Aligned protein translation created by opening File 1 (Compiled CDS sequences) in AliView and using MUSCLE alignment. File was then saved as a translated alignment fasta.
DOI: 10.6084/m9.figshare.28605662.v2
title: File_3-NCR1_Compiled_Aligned-AA-Sequences

description: File 3, Aligned protein translation created by opening File 1 (Compiled CDS sequences) in AliView and using MUSCLE alignment. File was then saved as a translated alignment fasta.
DOI: 10.6084/m9.figshare.28605662.v1
title: NCR1_Compiled_Aligned-AA-Sequences

description: File 3, Aligned protein translation created by opening File 1 (Compiled CDS sequences) in AliView and using MUSCLE alignment. File was then saved as a translated alignment fasta.
DOI: 10.5281/zenodo.11478468
title: The polyadenylation landscape after in vivo long-term potentiation in the rat brain

description: Supplementary Table 1. Summary of dentate gyri DRS data per gene. (A) Differential expression and differential adenylation data for 10 min timepoint. (B) Differential expression and differential adenylation data for 60 min timepoint. (C) GO-terms for genes with significantly elongated poly(A) tails in 10 min timepoint. (D) GO-terms for genes with significantly elongated poly(A) tails in 60 min timepoint. (E) GO-terms for upregulated genes in 10 min timepoint. (F) GO-terms for upregulated genes in 60 min timepoint. (G) GO-terms for upregulated genes with CPEB-binding motifs in 10 min timepoint. (H) GO-terms for upregulated genes with CPEB-binding motifs in 60 min timepoint.

Supplementary Table 2. Summary of dentate gyri cDNA data per gene. (A) Differential expression and differential adenylation data for 10 min timepoint. (B) Differential expression and differential adenylation data for 60 min timepoint. (C) GO-terms for genes with significantly elongated poly(A) tails in 10 min timepoint. (D) GO-terms for genes with significantly elongated poly(A) tails in 60 min timepoint. (E) GO-terms for upregulated genes in 10 min timepoint. (F) GO-terms for upregulated genes in 60 min timepoint. (G) GO-terms for upregulated genes with CPEB-binding motifs in 10 min timepoint. (H) GO-terms for upregulated genes with CPEB-binding motifs in 60 min timepoint.

Supplementary Table 3. High-confidence PASs. (A) PASs predicted for datasets obtained 10 min after LTP induction by TAPAS. (B) High confidence poly(A) clusters predicted by LAPA for datasets obtained 10 min after LTP induction. (C) PASs predicted for datasets obtained 60 min after LTP induction. (D) High confidence poly(A) clusters predicted by LAPA for datasets obtained 60 min after LTP induction.

Supplementary Table 4. Nonadenosine profiling upon LTP induction. (A) Summary of Ninetails pipeline for dentate gyrus. (B) List of genes containing semi-templated poly(A) tails with their 3′UTR coordinates.

Supplementary Table 5. Summary of synaptoneurosomal DRS data per gene. Differential expression and differential adenylation data.

Supplementary Table 6. Characteristics of analyzed material. Detailed information with sequencing depth, accession numbers, software used for analyses, and additional data characteristics. 

Supplementary Resource High-confidence poly(A) clusters annotation in bed format.
DOI: 10.6084/m9.figshare.28605806
title: File_2-NCR1_Compiled_Aligned-Primate-CDS-Sequences

description: File 2, Aligned primate CDS sequences. Created by removing the Rattus rattus outgroup from File 1 and using MUSCLE in AliView to align remaining primate sequences.
DOI: 10.6084/m9.figshare.28605806.v2
title: File_2-NCR1_Compiled_Aligned-Primate-CDS-Sequences

description: File 2, Aligned primate CDS sequences. Created by removing the Rattus rattus outgroup from File 1 and using MUSCLE in AliView to align remaining primate sequences.
DOI: 10.6084/m9.figshare.28605806.v1
title: NCR1_Compiled_Aligned-Primate-CDS-Sequences

description: File 2, Aligned primate CDS sequences. Created by removing the Rattus rattus outgroup from File 1 and using MUSCLE in AliView to align remaining primate sequences.
DOI: 10.15468/dl.qzjwxz
title: Occurrence Download

description: A dataset containing 117306 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((129.60752 -37.49482,148.2594 -46.28612,155.28237 -23.40623,144.93057 -9.04926,110.85587 -12.74634,112.02661 -36.96217,129.60752 -37.49482))",
 "OccurrenceStatus is Present",
 "Sex is one of (Female, Male, Indeterminate)",
 "TaxonKey is one of (Eucalyptus camaldulensis Denham, Acacia dealbata Link, Banksia integrifolia L.fil., Casuarina cunninghamiana Miq., Lophostemon confertus (R.Br.) Paul G.Wilson & J.T.Waterh., Macropus giganteus Shaw, 1790, Phascolarctos cinereus (Goldfuss, 1817), Myrmecia pyriformis J.B.Petersen, 1928, Pteropus poliocephalus Temminck, 1825, Chelonia mydas (Linnaeus, 1758))",
 "Year 2000-2025"
 ]
}

 The dataset includes 117306 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013535-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jpka6k
title: Occurrence Download

description: A dataset containing 59997 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Synallaxis spixi P.L.Sclater, 1856"
 ]
}

 The dataset includes 59997 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013530-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15042305
title: Raw VOCs GC/MS data

description: VOC's raw data
DOI: 10.5281/zenodo.15042306
title: Raw VOCs GC/MS data

description: VOC's raw data
DOI: 10.6084/m9.figshare.28611989
title: Representative DNA sequences and taxonomic assignments

description: To assess how readily fungi might migrate in response to climate change, we examined how climate and geography influence the regional distribution of fungi in soil and air. Specifically, we hypothesized that neighboring fungal communities should be more similar than distant communities (i.e., spatially autocorrelated) and that fungal dispersal should be more limited in soil than in air. We collected soil and air samples from 60 sites across five states in the Southwestern U.S. Then, we sequenced the ITS2 region to identify fungal taxa in each sample. Next, we used distance-based redundancy analysis to partition variation in fungal community composition between climate variables versus geography. Fungi were indeed spatially autocorrelated. Moreover, precipitation, maximum vapor pressure deficit, and soil moisture were significantly related to fungal community composition in soils. In comparison, only precipitation was significantly related to community composition in the air. After accounting for climate, the strength of spatial autocorrelation did not differ significantly in soilborne versus airborne fungi. In addition, dispersal limitation was only evident in soilborne fungi at long distances (&gt; 700 km) and was not observed at any distance in airborne fungi. Altogether, climate may influence which fungal taxa are present in soil and air, and fungi could feasibly disperse over regional scales.
DOI: 10.15468/dl.kn4yr9
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Inventario Herpetológico Pauto M, La Primavera, Yopal, Casanare"
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013546-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9bewmh
title: Occurrence Download

description: A dataset containing 3176 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Occurrence evidence)",
 "Continent is North America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rubus chamaemorus L."
 ]
}

 The dataset includes 3176 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013547-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.puz68j
title: Occurrence Download

description: A dataset containing 93 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Bokermannohyla alvarengai (Bokermann, 1956)"
 ]
}

 The dataset includes 93 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013548-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mfgkdk
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Morganella longispina (Morgan, 1889)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013549-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28605500
title: File_1-NCR1_Compiled-CDS-Sequences

description: File 1, Compiled CDS sequences of NCR1 in Homo sapien, eight selected non-human primates, and outgroup Rattus rattus. CDS sequences were found using Ensembl to BLAST the Homo sapien NCR1 sequence against chosen primates, including Papio anubis, Pan troglodytes, and Macaca mulatta.
DOI: 10.6084/m9.figshare.28605500.v2
title: File_1-_NCR1_Compiled-CDS-Sequences

description: File 1, Compiled CDS sequences of NCR1 in Homo sapien, eight selected non-human primates, and outgroup Rattus rattus. CDS sequences were found using Ensembl to BLAST the Homo sapien NCR1 sequence against chosen primates, including Papio anubis, Pan troglodytes, and Macaca mulatta.
DOI: 10.48511/fclfj1jv
title: Summit Lake Level (MCKSUM01L)

description: This dataset contains lake level and water temperature data for Summit Lake. The data is being collected to track climate change and other impacts on Columbia Basin water supply and to support community climate adaptation. Summit Lake is important habitat for the Western Toad, a Schedule 1 Species at Risk under SARA and was identified as a community priority. This site is part of the Columbia Basin Water Monitoring Framework program (CBWMF). The CBWMF is a coordinated monitoring network that tracks how climate change and other impacts are affecting water supply for communities and ecosystems across the Canadian Columbia Basin region.
DOI: 10.5281/zenodo.15001340
title: DHARMA LES output of marine cold-air outbreak event on 2022-03-29

description: LES output was used to produce figures in submitted manuscript "High accumulation mode aerosol concentration and moderate aerosol hygroscopicity limit impacts of recent particle formation on Northwest Atlantic post-frontal clouds".

 

Fig. 2

activate_20220329_morning_lowkappa_member1.cdf - "low kappa"

activate_20220329_morning_midkappa_member1.cdf - "mid kappa"

activate_20220329_morning_highkappa_member1.cdf - "high kappa"

 

Fig. 3

activate_20220329_morning_lowkappa_member1.cdf, activate_20220329_morning_lowkappa_member2.cdf, activate_20220329_morning_lowkappa_member3.cdf - "1) morning"

activate_20220329_afternoon_midkappa_member1.cdf, activate_20220329_afternoon_midkappa_member2.cdf, activate_20220329_afternoon_midkappa_member3.cdf - "2) afternoon"

activate_20220329_afternoon_midkappa_fixnucl_member1.cdf, activate_20220329_afternoon_midkappa_fixnucl_member2.cdf, activate_20220329_afternoon_midkappa_fixnucl_member3.cdf - "3) morning-nucleation, afternoon-accumulation"

 

Variables shown:

'alb'        - panel a

'colf_opd'   - panel b

'lwp'        - panel c

'rwp'        - panel d

'iwp'        - panel e

'max_ss'     - panel f

'nqc'        - panel g

'nqi'        - panel h

'avg_precip' - panel i

'avg_qv_flx' - panel j
DOI: 10.5281/zenodo.15001341
title: DHARMA LES output of marine cold-air outbreak event on 2022-03-29

description: LES output was used to produce figures in submitted manuscript "High accumulation mode aerosol concentration and moderate aerosol hygroscopicity limit impacts of recent particle formation on Northwest Atlantic post-frontal clouds".

 

Fig. 2

activate_20220329_morning_lowkappa_member1.cdf - "low kappa"

activate_20220329_morning_midkappa_member1.cdf - "mid kappa"

activate_20220329_morning_highkappa_member1.cdf - "high kappa"

 

Fig. 3

activate_20220329_morning_lowkappa_member1.cdf, activate_20220329_morning_lowkappa_member2.cdf, activate_20220329_morning_lowkappa_member3.cdf - "1) morning"

activate_20220329_afternoon_midkappa_member1.cdf, activate_20220329_afternoon_midkappa_member2.cdf, activate_20220329_afternoon_midkappa_member3.cdf - "2) afternoon"

activate_20220329_afternoon_midkappa_fixnucl_member1.cdf, activate_20220329_afternoon_midkappa_fixnucl_member2.cdf, activate_20220329_afternoon_midkappa_fixnucl_member3.cdf - "3) morning-nucleation, afternoon-accumulation"

 

Variables shown:

'alb'        - panel a

'colf_opd'   - panel b

'lwp'        - panel c

'rwp'        - panel d

'iwp'        - panel e

'max_ss'     - panel f

'nqc'        - panel g

'nqi'        - panel h

'avg_precip' - panel i

'avg_qv_flx' - panel j
DOI: 10.5281/zenodo.14795969
title: Paleomagnetic and rock magnetic observations from sediments and basalts collected at Expedition 375 Site U1526 on the Tūranganui Knoll, Hikurangi Plateau

description: Paleomagnetic and rock magnetic observations from Expedition 375 Hole U1526A basalt and Hole U1526B sediment samples collected from Tūranganui Knoll, Hikurangi Plateau:



Curie temperature experiments (CURIETEMP), 

DAT files, PCA plots, and best-fit directions (DEMAGPCA),

first-order reversal curves (FORCPLOT),

magnetic hysteresis data and plots (HYSTERESIS)

magnetic susceptibility measurements (MAGSUSC), and 

curatorial, analytical, lithologic, and age information for all samples analyzed (SAMPLES).
DOI: 10.5281/zenodo.14795970
title: Paleomagnetic and rock magnetic observations from sediments and basalts collected at Expedition 375 Site U1526 on the Tūranganui Knoll, Hikurangi Plateau

description: Paleomagnetic and rock magnetic observations from Expedition 375 Hole U1526A basalt and Hole U1526B sediment samples collected from Tūranganui Knoll, Hikurangi Plateau:



Curie temperature experiments (CURIETEMP), 

DAT files, PCA plots, and best-fit directions (DEMAGPCA),

first-order reversal curves (FORCPLOT),

magnetic hysteresis data and plots (HYSTERESIS)

magnetic susceptibility measurements (MAGSUSC), and 

curatorial, analytical, lithologic, and age information for all samples analyzed (SAMPLES).
DOI: 10.15468/dl.kwh85f
title: Occurrence Download

description: A dataset containing 14805 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Occurrence evidence)",
 "Continent is North America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rhododendron groenlandicum (Oeder) Kron & Judd"
 ]
}

 The dataset includes 14805 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013552-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.np5psw
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Bokermannohyla astartea (Bokermann, 1967)"
 ]
}

 The dataset includes 37 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013553-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xcajp7
title: Occurrence Download

description: A dataset containing 2548 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Synallaxis hypospodia P.L.Sclater, 1874"
 ]
}

 The dataset includes 2548 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013557-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r9v5re
title: Occurrence Download

description: A dataset containing 190 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Material sample, Material citation, Specimen)",
 "Geometry MULTIPOLYGON(((-105.03937 19.49013,-105.02315 19.49193,-105.01987 19.50011,-105.04397 19.52885,-105.04418 19.52908,-105.06211 19.54795,-105.06327 19.54886,-105.08031 19.55852,-105.08288 19.55917,-105.0862 19.5591,-105.09107 19.55468,-105.09329 19.53565,-105.09332 19.53507,-105.09332 19.53505,-105.09276 19.53275,-105.08652 19.52068,-105.08489 19.51885,-105.04598 19.49237,-105.04566 19.49217,-105.04354 19.49095,-105.04183 19.49034,-105.0407 19.49016,-105.03937 19.49013)))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aves",
 "Year 2004-2024"
 ]
}

 The dataset includes 190 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013556-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gabhgu
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Pulvinaria elongata Newstead, 1917",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013558-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.626vjg
title: Occurrence Download

description: A dataset containing 5396 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Synallaxis scutata P.L.Sclater, 1859"
 ]
}

 The dataset includes 5396 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013559-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h8745w
title: Occurrence Download

description: A dataset containing 362 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Occurrence evidence)",
 "Continent is North America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Zizania palustris L."
 ]
}

 The dataset includes 362 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013561-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tj8ap4
title: Occurrence Download

description: A dataset containing 13034 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cranioleuca vulpina (Pelzeln, 1856)"
 ]
}

 The dataset includes 13034 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013562-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.asgvre
title: Occurrence Download

description: A dataset containing 444 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Eugenia monticola (Sw.) DC."
 ]
}

 The dataset includes 444 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0200123-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nbqnff
title: Occurrence Download

description: A dataset containing 139 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Felicia dentata (A.Rich.) Dandy"
 ]
}

 The dataset includes 139 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002521-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.