cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.18434/m32209
title: A Benchmark for Automatic Best View Selection of 3D Objects

description: BEST VIEW SELECTION corresponds to the task of automatically selecting the most representative view of a 3D model. This benchmark aims to provide tools to evaluate automatic best view selection algorithms. It consists of the preferred viewpoints of 68 models selected by 26 human subjects, and a code to calculate "View selection error". The subjective viewpoints were collected using a web-based subjective experiment where the users were asked to select the most informative view of a 3D model.The 3D object dataset consists of 68 triangular meshes. Some of the models are standard models that are widely used in 3D shape research; and they have been used as test objects by researchers working on the best view problem.A web-based interface is used in the experiments. The user is shown the 68 3D models one at a time. Each model is initially rendered with a random pose. The user is asked to rotate the model via dragging the mouse into a view that he/she thinks is the best, and then to click on the submit button. 26 participants have submitted their preferred best views for the 68 models. For each model, we provide an ASCII file containing the view-points selected by the human subjects.Our evaluations take into account the symmetry sets of the viewpoints. We have used the Fourier-Mellin image matching technique to determine symmetries in the object with respect to a particular view-point.Please Cite the Paper: Dutagaci, Helin, Chun Pan Cheung, and Afzal Godil. "A benchmark for best view selection of 3D objects." Proceedings of the ACM workshop on 3D Object Retrieval. 2010. https://doi.org/10.1145/1877808.1877819
DOI: 10.15468/9egtkt
title: Review of the Camponotus samius complex (Hymenoptera: Formicidae) in the Turano-Balkan region, with the description of a new species from Iran

description: This dataset contains the digitized treatments in Plazi based on the original journal article Salata, Sebastian, Khalili-Moghadam, Arsalan, Borowiec, Lech (2020): Review of the Camponotus samius complex (Hymenoptera: Formicidae) in the Turano-Balkan region, with the description of a new species from Iran. Zootaxa 4763 (4): 545-562, DOI: 10.11646/zootaxa.4763.4.5
DOI: 10.17632/cksd46s8d8.2
title: Sanction index in iran

description: Sanction index in Iran with fuzzy logic
DOI: 10.17632/tggrsbz3bb.3
title: Dataset for country profile and mobility analysis in the assessment of COVID19 pandemic

description: There is a multitude of dimensions that must be taken into consideration to analyze the COVID19 pandemic in the world. With this in mind, this dataset consists of variables related to sociodemographic characteristics compiled from UN Data, mobility metrics that can assist the analysis of social distancing from Google Community Mobility Reports, and daily counts of cases and deaths by COVID19 from the European Centre for Disease Prevention and Control. By merging and preprocessing these datasets, plus some feature engineering, we are able to provide a single dataset with time-series data from February 15, 2020 to April 11, 2020, with a total of 57 days, 131 countries and 183 variables.
DOI: 10.18154/rwth-2020-03487
title: Dataset to "An Enzymatic Route to α‐Tocopherol Synthons: Aromatic Hydroxylation of Pseudocumene and Mesitylene with P450 BM3"

description: Aromatic hydroxylation of pseudocumene and mesitylene with P450 BM3 yields key phenolic building blocks for a-tocopherol synthesis. Site-saturation mutagenesis generated a new P450 BM3 mutant, named “variant M3” (R47S, Y51W, A330F, I401M), with significantly increased coupling efficiency (3- to 8-fold) and activity (75- to 230-fold) for the conversion of pseudocumene and mesitylene. Here the dataset to “An Enzymatic Route to α‐Tocopherol Synthons: Aromatic Hydroxylation of Pseudocumene and Mesitylene with P450 BM3” (Alexander Dennig, Alexandra Maria Weingartner, Tsvetan Kardashliev, Christina Andrea Müller, Erika Tassano, Martin Schürmann, Anna Joëlle Ruff, Ulrich Schwaneberg, Chemistry. 2017 Dec 19;23(71):17981-17991., doi: 10.1002/chem.201703647) is given. This study provides an enzymatic route to key phenolic synthons for a-tocopherols and the first catalytic and mechanistic insights into direct aromatic hydroxylation and dearomatization of trimethylbenzenes with O2.Source data of the performed substrate docking, and mechanistic considerations are given. Docking of mesitylene into the active site of P450 BM3 WT (source data to Fig1) and the homology model of P450 BM3 variant M3, as well as Docking of pseudocumene into the active site of P450 BM3 WT (1BU7) (source data to Fig2) and P450 BM3 variant M3 (R47S, Y51W, A330F, I401M) (source data to Fig3) are submitted. In the description of dataset a summary of the docking source data is given.
DOI: 10.15468/2vecsm
title: A new species of Chasmogenus Sharp, 1882 and new records of Hydrophilidae (Coleoptera) from Northeastern Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Alves, Tayná, Clarkson, Bruno, Lima, Lucas Ramos Costa (2020): A new species of Chasmogenus Sharp, 1882 and new records of Hydrophilidae (Coleoptera) from Northeastern Brazil. Zootaxa 4763 (4): 579-586, DOI: 10.11646/zootaxa.4763.4.7
DOI: 10.15468/cjqem5
title: Limbodessus skalei sp. nov., a new diving beetle species from the west Papuan Archipelago (Coleoptera: Dytiscidae, Bidessini)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hendrich, Lars, Surbakti, Suriani, Balke, Michael (2020): Limbodessus skalei sp. nov., a new diving beetle species from the west Papuan Archipelago (Coleoptera: Dytiscidae, Bidessini). Zootaxa 4763 (4): 587-592, DOI: 10.11646/zootaxa.4763.4.8
DOI: 10.17632/cjjw6hpv9b.1
title: Differential evolution outside the box - extended results

description: This repository contains extended results for the publication: - Differential evolution outside the box
DOI: 10.17632/cksd46s8d8.3
title: Sanction index in iran
DOI: 10.17632/cksd46s8d8.4
title: Sanction index in iran
DOI: 10.17632/shnf4m8khn.1
title: Deamidation Shunts RelA from Mediating Inflammation to Aerobic Glycolysis

description: Cell proliferation and inflammation are two metabolically demanding biological processes. How these competing processes are selectively executed in the same cell remains unknown. Here, we report that the carbamoyl phosphate synthetase, aspartyl transcarbamoylase and dihydroorotase (CAD) deamidates the RelA subunit of NF-kappaB in cancer cells to promote aerobic glycolysis and fuel cell proliferation in tumorigenesis. This post-translational modification switches RelA function from mediating the expression of NF-kappaB-responsive genes to that of glycolytic enzymes, thus shunting the cell’s inflammatory response to aerobic glycolysis. Further, we profiled diverse human cancer cell lines and found that high CAD expression and a subset of RELA mutations correlated with RelA deamidation. And by use of inhibitors of key glycolytic enzymes we validated the pivotal role of RelA deamidation in tumorigenesis of cancer cell lines. This work illuminates a mechanism by which protein deamidation selectively specifies gene expression and consequent biological processes.
DOI: 10.5281/zenodo.3760852
title: Car-sharing Dataset 2

description: Simulated Car-sharing data-set 2 with multiple fields including activities of anonymized users (e.g. source, destination, travel time, price offers etc.)
DOI: 10.5281/zenodo.3760853
title: Car-sharing Dataset 2

description: Simulated Car-sharing data-set 2 with multiple fields including activities of anonymized users (e.g. source, destination, travel time, price offers etc.)
DOI: 10.5281/zenodo.3761927
title: Trampoline Gymnastics - World Age Group Competitions 1999-2019

description: Database including all medals awarded during the World Age Group Competitions in Trampoline Gymnastics (Individual Trampoline, Synchronized Trampoline, Tumbling and Double Minitrampoline) from 1999 until 2019
DOI: 10.15468/n7rbcg
title: A new species of Stenampyx Karsch, 1890 from East Africa (Orthoptera: Tettigoniidae, Pseudophyllinae, Phyllomimini) - evidence of a former connection of West-Central and East African forests

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hemp, Claudia (2020): A new species of Stenampyx Karsch, 1890 from East Africa (Orthoptera: Tettigoniidae, Pseudophyllinae, Phyllomimini) - evidence of a former connection of West-Central and East African forests. Zootaxa 4763 (4): 593-599, DOI: 10.11646/zootaxa.4763.4.9
DOI: 10.17632/tggrsbz3bb.4
title: Dataset for country profile and mobility analysis in the assessment of COVID19 pandemic

description: There is a multitude of dimensions that must be taken into consideration to analyze the COVID19 pandemic in the world. With this in mind, this dataset consists of variables related to sociodemographic characteristics compiled from UN Data, mobility metrics that can assist the analysis of social distancing from Google Community Mobility Reports, and daily counts of cases and deaths by COVID19 from the European Centre for Disease Prevention and Control. By merging and preprocessing these datasets, plus some feature engineering, we are able to provide a single dataset with time-series data from February 15, 2020 to April 11, 2020, with a total of 57 days, 131 countries and 183 variables.
DOI: 10.17632/wyb73tkf9z.3
title: ECMO as a rescue treatment for severe COVID-19 patients in Wuhan, China

description: COVID-19 has spread all over the world. Moreover, COVID-19 has a high fatality. Most of severe COVID-19 patients have acute respiratory distress syndrome and need mechanical vantilation. Nevertheless, some very severe COVID-19 patients still fail to respond to the respiratory treatment. Extracorporeal membrane oxygenation (ECMO) has been indicated to be rescue treatment for very severe COVID-19 patients. The dataset here comes from the hospital in Wuhan, China, organized by a rescue team of china.
DOI: 10.18154/rwth-2020-03484
title: Dataset to "A hydroquinone-specific screening system for directed P450 evolution"

description: In direct evolution, an effective screening strategy is crucial for the identification of improved enzymes with desired characteristics in large mutant libraries. In the manuscript “A hydroquinone specific screening system for directed enzyme evolution” (A. M. Weingartner, D. F. Sauer, G. V. Dhoke, M. D. Davari, A. J. Ruff, and U. Schwaneberg, Appl Microbiol Biotechnol. 2018; 102(22): 9657–9667. doi: 10.1007/s00253-018-9328-3), we report a first screening system designed for screening of P450 variants capable to produce hydroquinones. The hydroquinone quantification assay is based on the interaction of 4-Nitrophenylacetonitrile (NpCN) with hydroquinones under alkaline conditions. The NpCN assay can be used for the quantification of dihydroxylated aromatic compounds such as hydroquinones, catechols and benzoquinones. We chose the hydroxylation of pseudocumene by P450 BM3 as a target reaction and screened for improved trimethylhydroquinone (TMHQ) formation. Here the dataset to the above mentioned manuscript is reported. Source Data of the NMR spectra (Fig1 and FigS1) are given as well as source data in Excel format to display the spectra of the hydroquinones (FigS3), the linear detection range of the assay of different hydroquinones (FigS6) or of TMHQ (Fig2) and screening data of the SSM library on position 330 with the NpCN assay (FigS7). In the description of dataset a summary of the collected source data is given.
DOI: 10.18434/m32215
title: SHREC'11 Track: Shape Retrieval on Non-rigid 3D Watertight Meshes

description: Non-rigid 3D objects are commonly seen in our surroundings. However, previous efforts have been mainly devoted to the retrieval of rigid 3D models, and thus comparing non-rigid 3D shapes is still a challenging problem in content-based 3D object retrieval. Therefore, we organize this track to promote the development of non-rigid 3D shape retrieval.The objective of this track is to evaluate the performance of 3D shape retrieval approaches on a large-scale database of non-rigid 3D watertight meshes generated by our group.Task description: The task is to evaluate the dissimilarity between every two objects in the database and then output the dissimilarity matrix.Data set: Our large-scale database consists of 600 non-rigid 3D objects (see the figure for some examples) that are created by our group using some modeling software and our own codes. We classified these models properly to make sure that every class contains equal number of models. The models are represented as watertight triangle meshes and the file format is selected as the ASCII Object File Format (*.off).(Note that: Some of these models we recreated and modified with permission are originally from several publicly available databases: such as McGill database, TOSCA shapes, Princeton Shape Benchmark, etc.)Evaluation Methodology: We will employ the following evaluation measures: Precision-Recall curve; E-Measure; Discounted Cumulative Gain; Nearest Neighbor, First-Tier (Tier1) and Second-Tier (Tier2).Please Cite the paper : SHREC'11 Track: Shape Retrieval on Non-rigid 3D Watertight Meshes, Z. Lian, A. Godil, B. Bustos, M. Daoudi, J. Hermans, S. Kawamura, Y. Kurita, G. Lavouï¿½, H.V. Nguyen, R. Ohbuchi, Y. Ohkita, Y. Ohishi, F. Porikli, M. Reuter, I. Sipiran, D. Smeets, P. Suetens, H. Tabia, and D. Vandermeulen , In: H. Laga and T. Schreck, A. Ferreira, A. Godil, I. Pratikakis, R. Veltkamp (eds.), Proceedings of the Eurographics/ACM SIGGRAPH Symposium on 3D Object Retrieval, 2011. http://dx.doi.org/10.2312/3DOR/3DOR11/079-088
DOI: 10.17632/ygvhvjzyz3.2
title: Local Improvement Districts as Political Participation Signals

description: Improvement District and Political Participation Study
DOI: 10.18434/m32214
title: SHREC'10 track: Range scan retrieval

description: The objective of this shape retrieval contest is to retrieve 3D models those are relevant to a query range scan. This task corresponds to a real life scenario where the query is a 3D range scan of an object acquired from an arbitrary view direction. The algorithm should retrieve the relevant 3D objects from a database.Task description: In response to a given set of queries, the task is to evaluate similarity scores with the target models and return an ordered ranked list along with the similarity scores for each query. The set of query consists of range images.Data set: The query set is composed of 120 range images, which are acquired by capturing 3 range scans of 40 models from arbitrary view directions. The range images are captured using a Minolta Laser Scanner. The file format is in the ASCII Object File Format (*.off) representing the scan in a triangular mesh.The target database contains 800 complete 3D models, which are categorized into 40 classes. In each class there are 20 models. The file format to represent the 3D models is the ASCII Object File Format (*.off).Evaluation Methodology: We will employ the following evaluation measures: Precision-Recall curve; Average Precision (AP) and Mean Average Precision (MAP); E-Measure; Discounted Cumulative Gain; Nearest Neighbor, First-Tier (Tier1) and Second-Tier (Tier2).Please Cite the Paper: Dutagaci H, Godil A, Cheung CP, Furuya T, Hillenbrand U, Ohbuchi R. SHREC'10 Track: Range Scan Retrieval. In3DOR 2010 May 2 (pp. 109-115). http://dx.doi.org/10.2312/3DOR/3DOR10/109-115
DOI: 10.5066/p9ei0kmr
title: Estimated Groundwater Withdrawals from Principal Aquifers in the United States--County Level Data for 2015

description: This dataset contains estimates of water withdrawals from 66 principal aquifers and "other" non-principal aquifers during 2015 for various categories of use in each county or county equivalent in the United States, Puerto Rico, and the U.S. Virgin Islands. The U.S. Geological Survey's (USGS) National Water Use Science Project is responsible for compiling and disseminating the Nation's water-use data. Withdrawal estimates are summarized in USGS Circular 1464, "Estimated Groundwater Withdrawals from Principal Aquifers in the United States, 2015" (Lovelace and others, 2020). This dataset contains the estimated groundwater withdrawals from principal aquifers by county and county equivalent that are summarized by lithologic group, principal aquifer, and state in Lovelace and others (2020). This dataset contains data for public supply, domestic, irrigation, thermoelectric power, industrial, mining, livestock, and aquaculture water-use categories. These data are a further refinement of groundwater withdrawals presented in USGS Circular 1441, "Estimated Use of Water in the United States in 2015" (Dieter and others, 2018). Lovelace, J.K., Nielsen, M.G., Read, A.L., and Murphy, C.J., 2020, Estimated withdrawals from principal aquifers in the United States--County-level data for 2015: U.S. Geological Survey data release, https://doi.org/10.5066/ P9Q3FKGT. Dieter, C.A., Maupin, M.A., Caldwell, R.R., Harris, M.A., Ivahnenko, T.I., Lovelace, J.K., Barber, N.L., and Linsey, K.S., 2018, Estimated use of water in the United States in 2015: U.S. Geological Survey Circular 1441, 65 p., https://doi.org/10.3133/cir1441.
DOI: 10.21227/7907-tn68
title: MRI of skull bone marrow after MRI-guided focused ultrasound

description: The following pages show axial T2-weighted MRI obtained at 24 hours and at 3-15 months after MRgFUS. The images shown here were registered to the same reference frame that was used in the thermal simulations; every third image is shown. To segment the bone marrow lesions, the registered images were toggled back and forth between the two time points to detect obvious changes. The lesion segmentations were completed before the acoustic and thermal simulations were performed. They were originally done on the native T2-weighted images acquired at 3-15 months after FUS. Relevant MRI parameters are indicated for each patient (TR: repetition time; TE: echo time; ETL: echo train length). The MRI parameters varied in the MRI at 3-15 months because the patients were sometimes imaged at other institutions. When thick slices were used at 3-15 months, dorsal regions of the skull were often challenging to interpret. These MRI were obtained to image the lesion in the thalamus and were not optimized for detecting skull lesions. Thus, in some cases the imaging did not cover the entire skull. In such cases, the missed areas were not included in our estimates of the lesion thresholds or in other comparisons of the isotherms and lesion segmentations. The patient number and the parameters used for MRgFUS are noted. The images on the top show simulated maximum temperature projections onto the surface of the skull (see Fig. 5-6 in the main manuscript for details).
DOI: 10.21227/w7pp-wq51
title: MRI of skull bone marrow after MRI-guided focused ultrasound

description: The following pages show axial T2-weighted MRI obtained at 24 hours and at 3-15 months after MRgFUS. The images shown here were registered to the same reference frame that was used in the thermal simulations; every third image is shown. To segment the bone marrow lesions, the registered images were toggled back and forth between the two time points to detect obvious changes. The lesion segmentations were completed before the acoustic and thermal simulations were performed. They were originally done on the native T2-weighted images acquired at 3-15 months after FUS. Relevant MRI parameters are indicated for each patient (TR: repetition time; TE: echo time; ETL: echo train length). The MRI parameters varied in the MRI at 3-15 months because the patients were sometimes imaged at other institutions. When thick slices were used at 3-15 months, dorsal regions of the skull were often challenging to interpret. These MRI were obtained to image the lesion in the thalamus and were not optimized for detecting skull lesions. Thus, in some cases the imaging did not cover the entire skull. In such cases, the missed areas were not included in our estimates of the lesion thresholds or in other comparisons of the isotherms and lesion segmentations. The patient number and the parameters used for MRgFUS are noted. The images on the top show simulated maximum temperature projections onto the surface of the skull (see Fig. 5-6 in the main manuscript for details).
DOI: 10.17632/h288d2rtgb.2
title: Data for: Is dollarization an alternative for Latin America?

description: Economic data for 19 Latin American & Caribean countries, USA, European Union, and China. Variables include: Exports, Real GDP, GDP sector composition, inflation, balance of payments, central government debt and primary net lending-borrowing. Real GDP data is segmented into two series: 1960-2000: Annual GDP in USD, base year = 2010. 2001-2018: Quarterly GDP in local currency, base year vary by country.
DOI: 10.25346/s6/zjkuac/nb4zps
title: 02-2020-04-17_data-cleaning-r-classnotes.pdf

description: Class notes, outline for workshop
DOI: 10.17632/vjr6z8kw77.7
title: BMCRN_DN_OI-Table file 1

description: Table file 1 Clinical features of patients with FTC in this study
DOI: 10.15161/oar.it/23597
title: CovidStat project data

description: This record contains the daily updated data of the CovidStat project. CovidStat is a project carried out by the CovidStat Working Group at INFN, whose creation was promoted within the Italian National Institute of Nuclear Physics with the aim of making a statistical analysis of the data provided daily by the Civil Protection on the spread of the pandemic in Italy. CovidStat data can interactively be browsed at https://covid19.infn.it.
description: The software to process this Root TTree is in the related identifier. Be sure to use the right corresponding version, based on the data in which Root TTree was generated.
DOI: 10.17632/3kr92svrrz.2
title: Interviews data

description: about EBN courses and TBL with nursing postgraduate students at Guangzhou University of Chinese Medicine（2019）
DOI: 10.17632/chst89kt63.1
title: Local perception and community involvement in wildlife hunting in Nepal: A national assessment. Data from Randomized Response Survey.
DOI: 10.17632/v3kzgr9rxb.1
title: Average wind speed records in Almeria - Spain
DOI: 10.17632/v3kzgr9rxb.2
title: Average wind speed records in Almeria - Spain
DOI: 10.5519/qd.bb6s3bh7
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (277 records)
DOI: 10.18434/m32217
title: SHREC'15: Range Scans based 3D Shape Retrieval

description: The objective of this shape retrieval contest is to retrieve 3D models those are relevant to a query range scan. This task corresponds to a real life scenario where the query is a 3D range scan of an object acquired from an arbitrary view direction. The algorithm should retrieve the relevant 3D objects from a database.Task description:In response to a given set of range scan queries, the task is to evaluate similarity scores with the target models and return an ordered ranked list along with the similarity scores for each query.Data set: The query set is composed of at least 180 range images, which are acquired by capturing 3 or 4 range scans of 60 models from arbitrary view directions. The range images are captured using a Minolta Laser Scanner. The file format is in the ASCII Object File Format (*.off) representing the scan in a triangular mesh.The target database contains 1200 complete 3D models, which are categorized into 60 classes. In each class there are 20 models. The file format to represent the 3D models is the ASCII Object File Format (*.off).Evaluation Methodology:We will employ the following evaluation measures: Precision-Recall curve; Average Precision (AP) and Mean Average Precision (MAP); E-Measure; Discounted Cumulative Gain; Nearest Neighbor, First-Tier (Tier1) and Second-Tier (Tier2).Please Cite the Paper: Godil A, Dutagaci H, Bustos B, Choi S, Dong S, Furuya T, Li H, Link N, Moriyama A, Meruane R, Ohbuchi R. SHREC'15: range scans based 3D shape retrieval. In Proceedings of the Eurographics Workshop on 3D Object Retrieval, Zurich, Switzerland 2015 May 3 (pp. 2-3). https://doi.org/10.5555/2852282.2852312