cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24903561.v1
title: Supplementary text, figures S1–S3, and tables S3–S4 from Ecological structure of diversity-dependent diversification in Phanerozoic marine bivalves

description: Rigorous analysis of diversity-dependence—the hypothesis that the rate of proliferation of new species is inversely related to standing diversity—requires consideration of the ecology of the organisms in question. Differences between infaunal marine bivalves (living entirely within the sediment) and epifaunal forms (living partially or completely above the sediment-water interface) predict that these major ecological groups should have different diversity dynamics: epifaunal species may compete more intensely for space and be more susceptible to predation and physical disturbance. By comparing detrended standing diversity with rates of diversification, origination, and extinction in this exceptional fossil record, we find that epifaunal bivalves experienced significant, negative diversity-dependence in origination and net diversification, whereas infaunal forms show little appreciable relationship between diversity and evolutionary rates. This macroevolutionary contrast is robust to the time span over which dynamics are analysed, whether mass-extinction rebounds are included in the analysis, the treatment of stratigraphic ranges that are not maximally resolved, and the details of detrending. We also find that diversity-dependence persists over hundreds of millions of years, even though diversity itself rises nearly exponentially, belying the notion that diversity-dependence must imply equilibrial diversity dynamics.
DOI: 10.6084/m9.figshare.6714083.v1
title: Distance, weight and transportation decision data of drone.xlsx

description: The data used are given as the distances of 315 different regions and the weights of the products to be transported to these zones. The data are simulated taking into account the maximum distance the drone can carry (9 km) and the maximum weight the drone can carry (890 grams). In addition, these values ​​have been set as minimums for distance from the vehicle, short distances of 1.7 km, and less than 300 grams of material for carriage. According to the model, "continue" or 1 value is assigned to the products according to the distance-weight values determined to be transported from the first station, and "stop" or 0 value is assigned to the products determined to be transported from the second station. <br>
DOI: 10.6084/m9.figshare.25735359.v1
title: Supplementary Material for: Severe relapsing autoimmune encephalitis with GABAA receptor, titin and AchR antibodies in a patient with thymoma: a case report

description: Introduction: We report a challenging case of autoimmune encephalitis in a patient with a thymoma harboring titin and acetylcholine receptor antibodies, who experienced multiple relapses despite thymectomy and aggressive first-line immunotherapy, and for whom GABAA receptor antibodies were ultimately identified.

Case presentation: This 40-year-old man presented with headaches, weakness, diplopia, hearing loss and seizures progressing to status epilepticus. Brain MRI showed multifocal cortical and subcortical T2/fluid attenuated inversion recovery hyperintense lesions without enhancement. Initial neural antibody testing identified only acetylcholine receptor and titin antibodies. He presented multiple severe relapses despite complete thymoma resection, intravenous methylprednisolone with immunoglobulins or plasmapheresis, and mycophenolate mofetil. Second-line immunotherapy with rituximab was successful to alleviate symptoms and normalize the EEG and MRI after identification of anti-GABAA receptor antibodies on more comprehensive neural antibody testing for autoimmune encephalitis. 

Conclusion: This case demonstrates the complexity and importance of identifying pathogenic antibodies and selecting 2nd line treatment accordingly in patients with autoimmune encephalitis when multiple antibodies coexist. Despite tumor resection, aggressive immunotherapy may be needed to prevent further deterioration in anti-GABAA receptor encephalitis.
DOI: 10.6084/m9.figshare.15105828.v1
title: Data available.docx

description: <b>Background: </b>Children with intellectual disabilities (ID) typically master walking skills much later than typically developing (TD) children and have poor postural control ability. This study aimed to explore the gait ability and characteristics of children with ID, and whether there is any difference in walking ability between them and TD children.<b>Method: </b>In this study, integrating kinematic-biomechanic-dynamic measurement methods and corresponding analysis methods (video analysis, three-dimensional force analysis, and electromyography test analysis) were used to characterise and compare the gait patterns between ID children and TD children.
DOI: 10.6084/m9.figshare.12794816.v1
title: Data from: Functional responses modified by predator density

description: Realistic functional responses are required for accurate model predictions at the community level. However, controversy remains regarding which types of dependencies need to be included in functional response models. Several studies have shown an effect of very high predator densities on per capita predation rates, but it is unclear whether this predator dependence is also important at low predator densities. We fit integrated functional response models to predation data from 4-h experiments where we had varied both predator and prey densities. Using an information theoretic approach we show that the best-fit model includes moderate predator dependence, which was equally strong even at low predator densities. The best fits of Beddington–DeAngelis and Arditi–Akcakaya functional responses were closely followed by the fit of the Arditi–Ginzburg model. A Holling type III functional response did not describe the data well. In addition, independent behavioral observations revealed high encounter rates between predators. We quantified the number of encounters between predators and the time the focal predator spent interacting with other individuals per encounter. This time ‘‘wasted’’ on conspecifics reduced the total time available for foraging and may therefore account for lower predation rates at higher predator densities. Our findings imply that ecological theory needs to take realistic levels of predator dependence into account.
DOI: 10.6084/m9.figshare.22493278.v1
title: Experiment 1 VSTM Task; Experiment 2 VSTM task; VSTM task practice trials; Threshold estimation from Causal evidence for the role of the sensory visual cortex in visual short-term memory maintenance

description: The TMS memory task used in Experiment 1; The TMS memory task used in Experiment 2; Practice of the memory task for Experiments 1 and 2; The behavioural and TMS staircases used for individualising each experiment
DOI: 10.6084/m9.figshare.13883321.v1
title: Korean HCC cohort (extended)

description: Clinical metadata for extended Korean HCC cohorts; liver transplantation (LT) and surgical resection (non-LT)
DOI: 10.6084/m9.figshare.24936075.v2
title: Dipterocarpoidae genomics reveal their demography and adaptations to Asian rainforests

description: The annotation data of seven Dipterocarpoideae species (<i>Hopea hainanensis, Hopea reticulata, Hopea chinensis, Parashorea chinensis, Shorea robusta, Dipterocarpus turbinatus </i>and<i> Vatica mangachapoi</i>).
DOI: 10.6084/m9.figshare.29117372.v1
title: Classroom observations

description: South African education system supports the use of previously marginalised indigenous languages as a sign of reform and to ensure inclusivity and equitable access to education. However, using indigenous languages in STEM (Science, Technology, Engineering, and Mathematics) is a debated subject. Nevertheless, there is an emerging interest towards the use of indigenous languages in Mathematics and science, which is evident through initiatives such as the piloted Mother Tongue based Bilingual Education (MTbBE). Such initiatives require learning resources in various indigenous languages to succeed. In addition, the effectiveness of such resources needs to be investigated.This is a qualitative research that use a case study approach to investigate the influence of scientific language register written in Sepedi on classroom interaction and discourse. The study involves three schools in Seotlong circuit, and each school is treated as a case. Each case consists of one Sepedi-speaking Natural Sciences and Technology (NST) teacher and one Intermediate Phase classroom of Sepedi-speaking learners. The data from these participants was collected using lesson observations and diary entries. Inductive Content Analysis was used to analyse the data.The results indicated that the classrooms were interactive in all three cases. This shows that Sepedi scientific language register positively influenced the classroom atmosphere and encouraged interaction. This is important in science, which aims to promote enquire based leaning. This highlights the importance of the developing and using indigenous language learning materials in NST to facilitate teaching and learning.Sepedi scientific language register brings together language and science. Thus, closing the gap between science and local languages, and allowing free interaction between learners and teachers without language barrier. Therefore, it was proven to be an effective learning resource for teaching NST. Hence, this study recommends the use of Sepedi scientific language register as a learning tool for NST.
DOI: 10.6084/m9.figshare.3101617.v1
title: A two dimensional electromechanical model of a cardiomyocyte to assess intra-cellular regional mechanical heterogeneities

description: This file collection include the files for creating a phanthom/synthetic data of cardiomyocyte use for validating a computational model.<br>Also include the line T-tubule and Ca2+ images from 3 real cells used to estimate the local elasticity of them with a computational model<br><br>
DOI: 10.15468/dl.gt2kyt
title: Occurrence Download

description: A dataset containing 1531 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oxytenanthera abyssinica (A.Rich.) Munro"
 ]
}

 The dataset includes 1531 records from 102 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013519-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25761645.v1
title: <b>Supplementary materials</b>

description: This research aims to identify restorative environments to enhance mental health.
DOI: 10.6084/m9.figshare.25217840.v1
title: Lapsed El Niño impact on Atlantic and Northwest Pacific tropical cyclone activity in 2023

description: The El Niño-Southern Oscillation (ENSO) is a major factor modulating interannual variability of tropical cyclone (TC) activity, typically resulting in the suppressed TC genesis frequency (TCGF) over the North Atlantic (NA) and a distinct northwest-southeast dipole pattern in TCGF anomaly over the western North Pacific (WNP) during El Niño years. However, the TC season of 2023, a year of strong El Niño, presented an intriguing departure from this norm, as the NA experienced an unexpectedly active season with 20 TCs, while the WNP witnessed a decrease in the basin count with only 13 TCs.
DOI: 10.6084/m9.figshare.7387679.v1
title: Data on 1,071 in-hospital falls at a large hospital in South Brazil from 2012 - 2017

description: This dataset contains information on 1,071 in-hopsital falls that occurred between 2012 and 2017 at Hospital Moinhos de Vento, a 497-bed institution located in the city of Porto Alegre, Brazil.<br>The reporting of falls in hospital settings is recognized as a prevention strategy for informing corrective actions with the aim of preventing future such events. To this end, this dataset contains a broad array of variables relating to each fall incident (note that not all years include each variable): * Date of incident* Birth decade of patient* Age range of patient* Sex of patient* Weekday of incident* Shift during which the incident ocurred* Hospital department or location of incident * Location or environment in which the incident ocurred* Severity of incident* Presence of companion at time of incident* Fall risk level as measured by the Johns Hopkins Fall Risk Assessment Tool* Involvement of medication associated with fall risk* Whether a fall prevention protocol was implemented* Type of injury incurred, if any* Reason for incident* Whether a restraint prescription was given * Whether a physical therapy prescription was given<br>The data are presented as a single Excel XLSX file: <b>hospital-fall-data-2012-2017.xlsx</b>, separated into sheets according to year of data capture for the years 2012 - 2017.<br>Learning about the characteristics of these events and establishing a profile may contribute to the design of adequate prevention and improvement strategies that effectively reduce the risk of falls.<br>The project from which these data were extracted was approved by the institution’s research ethics committee (CAAE: 57679316.9.0000.5330 - approval 1.833.572).
DOI: 10.6084/m9.figshare.24647832.v3
title: How Induced Earthquakes Respond to Pre-Existing Fractures and Hydraulic Fracturing Operations? A Case Study in South China

description: This item contains the earthquake catalog, focal mechanism, seismic waveforms, Ant tracking 3D attribute, and injection data used in the paper "How Induced Earthquakes Respond to Pre-Existing Fractures and Hydraulic Fracturing Operations? A Case Study in South China". The catalog has 928 injection-induced earthquakes and their corresponding waveforms. We selected and computed the focal mechanism with M larger than 0.
DOI: 10.6084/m9.figshare.12478634.v1
title: JARVIS-DFT Wannier 3D materials (JVASP-40531 to JVASP-85013)

description: In this work, we develop a computational workflow for high-throughput Wannierization of density functional theory (DFT) based electronic band structure calculations. We apply this workflow to 1771 materials, and we create a database with the resulting Wannier-function based tight binding Hamiltonians (WTBH). We evaluate the accuracy of the WTBHs by comparing the Wannier band structures to directly calculated DFT band structures on both the set of k-points used in the Wannierization as well as independent k-points from high symmetry lines. Accurate WTBH can be used for the calculation of many materials properties, and we include a few example applications. We also develop a web-app that can be used to predict electronic properties on-the-fly using WTBH from our database. The tools to generate the Hamiltonian and the database of the WTB parameters will be made publicly available through the websites https://github.com/usnistgov/jarvis and https://www.ctcms.nist.gov/jarviswtb.
DOI: 10.6084/m9.figshare.14794089.v1
title: RDP taxonomy .qza file

description: RDP taxonomy .qza file for use with Qiime2's feature-classifier command. Created from https://figshare.com/s/7881ff1724948e513162 & https://figshare.com/s/86d9b343729e4c67ea08See https://forum.qiime2.org/t/rdp-reference-database-in-qiime2-format/15146/10 for more.
DOI: 10.6084/m9.figshare.26223095.v1
title: Translation of exosomal mRNA

description: <b>Bovine mRNAs in small extracellular vesicles from cow’s milk are bioavailable in mice but translation products are not detectable in reticulocyte lysates and human U937 cells</b>
DOI: 10.6084/m9.figshare.13312070.v1
title: Global Subsidence Maps

description: Global Subsidence Map:<br><br>1) GSS.rar &gt; compressed file containing the Global Subsidence Susceptibility in 2010<br>2) GSH.rar &gt; compressed file containing the Potential Global Subsidence in 2010<br>3) GSH_2040.rar &gt; compressed file containing the Potential Global Subsidence in 2040<b></b><i></i><sub></sub><sup></sup><br>4) Supplementary Tables.rar &gt; the three tables in the SM<br>5) Read_me.txt &gt; instructions of the map files<br>
DOI: 10.6084/m9.figshare.28071410.v1
title: Uncertainty maps for model-based global climate classification systems

description: The dataset includes climate classification maps and their associated consensus maps for present climate and three future socio-economic pathways (SSPs). These maps represent the Earth's climate zones according to four well-established classification schemes: Holdridge, Köppen, Thornthwaite, and Whittaker. The data are based on Global Climate Model (GCM) simulations from the Coupled Model Intercomparison Project phase six (CMIP6). For further information on the source archives of these climate classification maps, please refer to the 'Data Records' section in Navarro et al. (2025). If you use these maps in any publications, please cite Navarro et al. (2025).

code.tar.gz
This tar.gz contains the source code used to generate the results presented in the manuscript.

GeoTiff.tar.gz
This tar.gz contains GeoTIFF files for four climate classification schemes (Holdridge, Köppen, Thornthwaite, and Whittaker) along with corresponding consensus maps for present climate and three future SSPs.

NetCDF.tar.gz
This tar.gz contains NetCDF files for four climate classification schemes (Holdridge, Köppen, Thornthwaite, and Whittaker) along with corresponding consensus maps for present climate and three future SSPs.

BIL.tar.gz
This tar.gz contains BIL and HDR files for four climate classification schemes (Holdridge, Köppen, Thornthwaite, and Whittaker) along with corresponding consensus maps for present climate and three future SSPs.
DOI: 10.6084/m9.figshare.9932444.v1
title: Monthly water discharge from Datong Station, Yangtze River, China (2005-2017)

description: Data were collected daily by Zhai's group from the website of China Bureau of Hydrology (now at http://xxfb.mwr.cn/ssIndex.html). Then the daily discharge data were summed up to obtain weekly, monthly and yearly water discharges
DOI: 10.6084/m9.figshare.28682933.v3
title: <b>Negative impacts of global change stressors permeate into deep soils</b>

description: This dataset includes data on various global change stressors and soil ecosystem functions across soil profiles (topsoil: 0-30 cm, subsoil: 30-60 cm, deep soil: 60-100 cm) from 44 natural ecosystems (spanning from 19.95°N to 48.05°N) that cover a broad range of climate, vegetation and soil types. The data were collected both from field surveys and publicly accessible data sources. The data and R scripts are also available in Github (https://github.com/sehea/MSproject.git).
DOI: 10.6084/m9.figshare.22580548.v1
title: Baidu Migration Data

description: Detailed information about the Baidu Migration data is listed in README.
DOI: 10.15468/dl.zna2n2
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Leptoderma macrops Vaillant, 1886",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((7.2551 0.4095,6.9596 0.8334,6.5492 0.9061,6.0738 0.5779,5.9713 0.201,6.1078 -0.2929,6.5348 -0.5139,7.0629 -0.1853,7.2551 0.4095))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013521-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.21393780.v1
title: Genome assembly and annotation files of Pedicularis kansuensis

description: Genome assembly, annotation and CDS files of <em>Pedicularis kansuensis </em>
DOI: 10.6084/m9.figshare.25245190.v1
title: <b><i>Dataset of media practices for informational, educational, and entertainment purposes in Peru</i></b>

description: This database consists of the Peruvian media diet in a post-pandemic context. Specifically, it examines how Peruvians define and utilise media to create environments for information, learning, and entertainment.
DOI: 10.6084/m9.figshare.6015902.v3
title: Dataset - Assessing naturally acquired immune response and malaria treatment outcomes in Lagos, Nigeria

description: The study examined antibody responses against malaria<i> </i>and the influence on the efficacy of artemether-lumefantrine in Lagos, Nigeria. Plasma samples were collected prior to treatment from individuals presenting with uncomplicated malaria. Participants were stratified into early and late clearance groups. Luminex assay was used to profile antibody response specific to 21 malaria parasite antigens.Ethical approval was obtained from the Nigerian Institute of Medical Research, Nigeria. <br>
DOI: 10.6084/m9.figshare.12062634.v1
title: Global Urban Tree Inventory (GUTI, vers. 1.0)

description: This dataset is the Appendix 3 of the manuscript by OSSOLA Alessandro, HOEPPNER J. Malin, BURLEY M. Hugh, GALLAGHER V. Rachael, BEAUMONT J. Linda and LEISHMAN R Michelle, 2020. <i>The Global Urban Tree Inventory: A database of the diverse tree flora that inhabits the world’s cities</i>. Global Ecology and Biogeography.
DOI: 10.6084/m9.figshare.13182401.v2
title: Feraco et al., 2022 "An integrated model of school students’ academic achievement and life satisfaction. Linking soft skills, extracurricular activities, self-regulated learning, motivation, and emotions"

description: The dataset includes all the data used for the study. In particular, it includes standardized total scores for:- 6 soft skills (adaptability, curiosity, initiative, leadership, perseverance, social awareness)- soft skills total- self-regulated learning (SRL)- scholastic motivation- cognitive abilities - years of extracurricular activities (ECA)- life satisfaction- grades (mean of italian, math, foreign language and science) - positive and negative affects (PA, NA)<br>and the age of the participants
DOI: 10.6084/m9.figshare.14128724.v1
title: EQ36 database

description: This customized database for the modeling code EQ36 contains equilibrium constants for dissolution of minerals and thermodynamic properties for aqueous species and gases as documented in <br>Klein, F., Bach, W., McCollom, T.M. (2013): Compositional controls on hydrogen generation during serpentinization of ultramafic rocks. Lithos 178, 55-69.
DOI: 10.6084/m9.figshare.28826522.v1
title: RoB2 signaling question for PAH

description: Phosphodiesterase type 5 inhibitor plus endothelin receptor antagonist compared to either alone for group 1 pulmonary arterial hypertension.
DOI: 10.6084/m9.figshare.29126864.v1
title: crash-dataset.csv

description: Motorcyclist crashes
DOI: 10.6084/m9.figshare.3527999.v1
title: Appendix A. Development of an MCMC algorithm by Gibbs sampling for a simple model.

description: Development of an MCMC algorithm by Gibbs sampling for a simple model.
DOI: 10.6084/m9.figshare.21971585.v1
title: The raw data for Genetic Polymorphism and mRNA Expression Studies Reveal IL6R and LEPR Gene Associations with Reproductive Traits

description:  The genotyping data of  6 SNPs for genes IL6R and LEPR in dairy cattle population.
DOI: 10.6084/m9.figshare.3524291.v1
title: Appendix A. Species composition of treatments a–z.

description: Species composition of treatments a–z.
DOI: 10.6084/m9.figshare.28078271.v1
title: Catecholamine synthesis and secretion by adrenal chromaffin cells is reduced in deer mice native to high altitude

description: This dataset accompanies a publication to examine how adrenal function is altered in high-altitude populations of deer mice, which have evolved to overcome chronic hypoxia in their native environment. High- and low-altitude populations of mice were each born and raised in common lab conditions, and then acclimated to normoxia or chronic hypoxia during adulthood. We then measured plasma catecholamine and corticosterone concentrations, adrenal chromaffin cell physiology and catecholamine stores, and adrenal gland structure. See associated publication for additional details on data and experimental design.
DOI: 10.6084/m9.figshare.22597288.v1
title: Data Files (Study 1 and 2)

description: Two SPSS datasets (one for each study).