cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.3xtqcb
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Silene papillosa Boiss.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0288493-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9czhmc
title: Occurrence Download

description: A dataset containing 160 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sagamichthys schnakenbecki (Krefft, 1953)"
 ]
}

 The dataset includes 160 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036965-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ju6a9n
title: Occurrence Download

description: A dataset containing 3040 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Country is one of (United States of America, Mexico, Canada)",
 "Year is greater than 1978",
 "Year is less than 2014",
 "HasGeospatialIssue is false",
 "TaxonKey is Cystopteris fragilis (L.) Bernh."
 ]
}

 The dataset includes 3040 records from 127 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0109571-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pfev2w
title: Occurrence Download

description: A dataset containing 721 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hyperolius castaneus Ahl, 1931"
 ]
}

 The dataset includes 721 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0301859-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10415242
title: Phylogenetics: back to basics dataset

description: This dataset is associated with the Galaxy Training Network tutorial "Phylogenetics: back to basics".

It contains a subset of anolis lizard DNA sequences, from Jackman, Larson, de Queiroz & Losos (Phylogenetic Relationships and Tempo of Early Diversfication in Anolis Lizards; Systematic Biology 1999 48(2):254-285; https://doi.org/10.1080/106351599260283). DNA sequences were obtained from Genbank.

The sequences are from the mitochondrial NADH dehydrogenase subunit 2 gene (ND2) and five transfer RNA (tRNA) genes, with an average sequence length of 1419.109 and a range of [1329,1727]. 

We are using a small set of sequences because phylogenetic estimation on many sequences is computationally very intensive, and can take weeks of time even on a high-performance computer. It is not uncommon for a phylogenetic analysis to span hundreds, or even thousands, of taxa.

Files in this record:



anolis-raw.fst : FASTA file of raw, unaligned sequences

anolis-trimmed-aligned-clustal.fst : FASTA file of trimmed and aligned sequences


This Galaxy Training Network tutorial  ‘Phylogenetics: back to basics’ was developed by Professor Michael Charleston from the University of Tasmania in collaboration with Australian BioCommons. 

Contact: training@biocommons.org.au
DOI: 10.5281/zenodo.10415241
title: Phylogenetics: back to basics dataset

description: This dataset is associated with the Galaxy Training Network tutorial "Phylogenetics: back to basics".

It contains a subset of anolis lizard DNA sequences, from Jackman, Larson, de Queiroz & Losos (Phylogenetic Relationships and Tempo of Early Diversfication in Anolis Lizards; Systematic Biology 1999 48(2):254-285; https://doi.org/10.1080/106351599260283). DNA sequences were obtained from Genbank.

The sequences are from the mitochondrial NADH dehydrogenase subunit 2 gene (ND2) and five transfer RNA (tRNA) genes, with an average sequence length of 1419.109 and a range of [1329,1727]. 

We are using a small set of sequences because phylogenetic estimation on many sequences is computationally very intensive, and can take weeks of time even on a high-performance computer. It is not uncommon for a phylogenetic analysis to span hundreds, or even thousands, of taxa.

Files in this record:



anolis-raw.fst : FASTA file of raw, unaligned sequences


This Galaxy Training Network tutorial  ‘Phylogenetics: back to basics’ was developed by Professor Michael Charleston from the University of Tasmania in collaboration with Australian BioCommons. 

Contact: training@biocommons.org.au

Version notes: anolis-raw.fst file updated to remove blank line at the beginning of the file.
DOI: 10.5281/zenodo.11089653
title: Phylogenetics: back to basics dataset

description: This dataset is associated with the Galaxy Training Network tutorial "Phylogenetics: back to basics".

It contains a subset of anolis lizard DNA sequences, from Jackman, Larson, de Queiroz & Losos (Phylogenetic Relationships and Tempo of Early Diversfication in Anolis Lizards; Systematic Biology 1999 48(2):254-285; https://doi.org/10.1080/106351599260283). DNA sequences were obtained from Genbank.

The sequences are from the mitochondrial NADH dehydrogenase subunit 2 gene (ND2) and five transfer RNA (tRNA) genes, with an average sequence length of 1419.109 and a range of [1329,1727]. 

We are using a small set of sequences because phylogenetic estimation on many sequences is computationally very intensive, and can take weeks of time even on a high-performance computer. It is not uncommon for a phylogenetic analysis to span hundreds, or even thousands, of taxa.

Files in this record:



anolis-raw.fst : FASTA file of raw, unaligned sequences


This Galaxy Training Network tutorial  ‘Phylogenetics: back to basics’ was developed by Professor Michael Charleston from the University of Tasmania in collaboration with Australian BioCommons. 

Contact: training@biocommons.org.au

Version notes: anolis-raw.fst file updated to remove blank line at the beginning of the file.
DOI: 10.15468/dl.gezkfw
title: Occurrence Download

description: A dataset containing 1331324 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Repatriated is TRUE",
 "Country is Norway"
 ]
}

 The dataset includes 1331324 records from 1306 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0301843-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vq73x6
title: Occurrence Download

description: A dataset containing 650 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Trichilia cipo (A.Juss.) C.DC., Trichilia froesii A.C.Sm.)"
 ]
}

 The dataset includes 650 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016986-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2vvpuk
title: Occurrence Download

description: A dataset containing 453094 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gallinula tenebrosa Gould, 1846"
 ]
}

 The dataset includes 453094 records from 98 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004220-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rupnnn
title: Occurrence Download

description: A dataset containing 242 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tibicina garricola Boulard, 1983"
 ]
}

 The dataset includes 242 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004242-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/8907259
title: Top Spotify Songs in 73 Countries (Daily Updated)
DOI: 10.15468/dl.damwz3
title: Occurrence Download

description: A dataset containing 36121 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Luzula campestris subsp. campestris)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 36121 records from 193 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004201-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p6xbkz
title: Occurrence Download

description: A dataset containing 1755 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Caracal caracal (Schreber, 1776)"
 ]
}

 The dataset includes 1755 records from 88 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004196-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4gkkrw
title: Occurrence Download

description: A dataset containing 16403 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Vespa velutina Lepeletier, 1836",
 "Year is greater than or equal to 2020",
 "Year is less than or equal to 2022",
 "Country is Belgium"
 ]
}

 The dataset includes 16403 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004192-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6stvyf
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.19_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Oxytropis ochrantha Turcz."
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016987-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rhnwjc
title: Occurrence Download

description: A dataset containing 49 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "GadmGid is CHN.19_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Salix hsinganica Y.L.Chang & A.K.Skvortsov"
 ]
}

 The dataset includes 49 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016988-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.favpnq
title: Occurrence Download

description: A dataset containing 42224 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Patzkea paniculata (L.) G.H.Loos)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 42224 records from 240 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004187-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/8907261
title: Public Opinion on Climate Change (Updated Daily)
DOI: 10.15468/dl.m9nywt
title: Occurrence Download

description: A dataset containing 28152 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Hemidactylus frenatus Duméril & Bibron, 1836"
 ]
}

 The dataset includes 28152 records from 226 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002311-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.byq8pj
title: Occurrence Download

description: A dataset containing 6400 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Fish occurrence in middle Volga and upper Don regions (Russia)"
 ]
}

 The dataset includes 6400 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002312-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mpxcug
title: Occurrence Download

description: A dataset containing 16200 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "TaxonKey is Egretta caerulea (Linnaeus, 1758)"
 ]
}

 The dataset includes 16200 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016989-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v32fy9
title: Occurrence Download

description: A dataset containing 63415 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is MMNS Ichthyology Collection"
 ]
}

 The dataset includes 63415 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002271-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hj8x5y
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melica rectiflora Boiss. & Heldr.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 53 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002260-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5wu3w9
title: Occurrence Download

description: A dataset containing 27286 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Bromus racemosus L.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 27286 records from 555 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002112-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hjfsv8
title: Occurrence Download

description: A dataset containing 1438 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pygocentrus nattereri Kner, 1858"
 ]
}

 The dataset includes 1438 records from 86 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0420003-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-46454
title: Redemption tidings, vol. 18, nos. 1-26, 2 Jan. - 18 Dec. 1942

description: [description english/roman)] Issued fortnightly (every two weeks). "A full gospel magazine for all believers" -- subtitle. Includes Tidings from our missionaries in each issue (1 Jan. - 22 May, 19 June, 17 July - 4 Dec. 1942) except vol. 18, nos. 11, 14 & 26.
DOI: 10.15468/dl.7ta6ag
title: Occurrence Download

description: A dataset containing 289 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Scutellinia crucipila (Cooke & W.Phillips) J.Moravec)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 289 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0252668-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6nu9cg
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chiropterotriton casasi Parra-Olea, García-Castillo, Rovito, Maisano, Hanken & Wake, 2020)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062522-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sjgcqx
title: Occurrence Download

description: A dataset containing 160962 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Dictyochophyceae"
 ]
}

 The dataset includes 160962 records from 685 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0143297-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.37ck95
title: Occurrence Download

description: A dataset containing 655 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aneides niger Myers & Maslin, 1948, Alcides niger Hustache, 1924, Aedes niger Giles, 1904)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 655 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062418-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qngs4p
title: Occurrence Download

description: A dataset containing 1993 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Distribución, estructura poblacional y utilización del saguaro (Carnegiea gigantea (Engelm.) Britt. & Rose) en México"
 ]
}

 The dataset includes 1993 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0320037-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-41745
title: Redemption tidings, vol. 7, nos. 1-12, Jan.-Dec. 1931

description: [description english/roman)] Issued monthly. "A full gospel magazine for all believers" -- subtitle. Bound with vol. 8-9. Includes Missionary supplement to Redemption tidings in each issue (Jan.-Dec. 1931).
DOI: 10.15468/dl.a2far3
title: Occurrence Download

description: A dataset containing 4590 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Ambystoma opacum (Gravenhorst, 1807)"
 ]
}

 The dataset includes 4590 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0203302-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pwzn2f
title: Occurrence Download

description: A dataset containing 6301 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cervus nippon Temminck, 1838"
 ]
}

 The dataset includes 6301 records from 115 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0143291-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bdty67
title: Occurrence Download

description: A dataset containing 4501 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Hylotelephium anacampseros (L.) H.Ohba)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 4501 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0252736-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bk8v2d
title: Occurrence Download

description: A dataset containing 105 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Limnonectes parvus (Taylor, 1920))",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 105 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062501-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vqz5c5
title: Occurrence Download

description: A dataset containing 90706 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Membracidae"
 ]
}

 The dataset includes 90706 records from 792 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0203296-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.