cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48331/scielodata.3bqgsr
title: Dados de replicação para: Vigilância alimentar e nutricional: perfil do trabalhador e condições de trabalho na atenção básica.

description: Banco de dados primários vinculados à pesquisa "Processos formativos para o enfrentamento e controle da obesidade no âmbito do SUS em Pernambuco – ECOASUS-PE" em função da chamada CNPq/MS/SAS/DAB/CGAN n. 26/2018. Os dados foram coletados por meio de formulário eletrônico de junho a setembro de 2021.
DOI: 10.5281/zenodo.17943184
title: Intraphase translocation synteny analysis

description:  Supplementary Fig 20a: Intraphase translocation synteny analysis chr 10 and 9 and 9 and 8
DOI: 10.5281/zenodo.17943183
title: Intraphase translocation synteny analysis

description:  Supplementary Fig 20a: Intraphase translocation synteny analysis chr 10 and 9 and 9 and 8
DOI: 10.5281/zenodo.16912487
title: Load-Dependent Power-Law Exponent in Creep Rupture of Heterogeneous Materials

description: Dataset containing experimental and numerical data (as well as Python scripts for data analysis and numerical simulations) on creep dynamics of heterogeneous materials, as presented in the article "Load-Dependent Power-Law Exponent in Creep Rupture of Heterogeneous Materials" by the same authors.
DOI: 10.5281/zenodo.17303455
title: Load-Dependent Power-Law Exponent in Creep Rupture of Heterogeneous Materials

description: Dataset containing experimental and numerical data (as well as Python scripts for data analysis and numerical simulations) on creep dynamics of heterogeneous materials, as presented in the article "Load-Dependent Power-Law Exponent in Creep Rupture of Heterogeneous Materials" by the same authors.
DOI: 10.5066/p14podhe
title: Nesting and non-nesting emergences for four species of imperiled sea turtles derived from acceleration data loggers, 2012-2017

description: These data contain acceleration, pitch, yaw, roll, and ancillary data collected by acceleration data loggers (ADL) attached to four sea turtle species: green (Chelonia mydas) sea turtles, hawksbill (Eretmochelys imbricata) sea turtles, Kemp's ridley (Lepidochelys kempii) sea turtles, and loggerhead (Caretta caretta) sea turtles. A total of 54 nesting events and 76 non-nesting emergence events were identified in the data and validated by satellite tag location data for three of the four species (i.e., Kemp's ridley spatial data not included) and researcher observations.
DOI: 10.15468/dl.w4mkav
title: Occurrence Download

description: A dataset containing 80072 species occurrences available in GBIF matching the query:
{
 "and" : [
 "FamilyKey is Orchidaceae",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is Brazil"
 ]
}

 The dataset includes 80072 records from 267 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053928-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17943103
title: AlphaRING-X: accurate interpretation of missense variant deleteriousness based on protein structural stability

description: alpharing-x_human_variant_summary.txt: Contains the ClinVar data, AlphaRING-X feature data, and more on all the missense variants used to train, calibrate, and test the AlphaRING-X classifier.


 



alpharing-x_human_variant_test_predictions.txt: Contains delteriousness predictions, including scores and feature SHAP values, for all the missense variants used to test the AlphaRING-X classifier.


 



alpharing-x_predictions.tar: Contains the AlphaRING-X software input and output for all the missense variants in the "alpharing-x_human_variant_summary.txt" file.


 



train_alpharing-x_classifier.py: Script that trains, calibrates, and persists the AlphaRING-X classifier package, which contains the calibrated classifier and the training data as background for use with the SHAP explainer. To run, the "alpharing-x_human_variant_summary.txt" file or equivalent is required.


 



generate_alpharing-x_paper_data.py: Script that reproduces the data plotted in the manuscript. To run, the "alpharing-x_human_variant_summary.txt file" and the output of "train_alpharing-x_classifier.py" are required.
DOI: 10.5281/zenodo.16687550
title: AlphaRING-X: accurate interpretation of missense variant deleteriousness based on protein structural stability

description: alpharing-x_human_variant_summary.txt: Contains the ClinVar data, AlphaRING-X feature data, and more on all the missense variants used to train, calibrate, and test the AlphaRING-X classifier.


 



alpharing-x_human_variant_test_predictions.txt: Contains delteriousness predictions, including scores and feature SHAP values, for all the missense variants used to test the AlphaRING-X classifier.


 



alpharing-x_predictions.tar: Contains the AlphaRING-X software input and output for all the missense variants in the "alpharing-x_human_variant_summary.txt" file.


 



train_alpharing-x_classifier.py: Script that trains, calibrates, and persists the AlphaRING-X classifier package, which contains the calibrated classifier and the training data as background for use with the SHAP explainer. To run, the "alpharing-x_human_variant_summary.txt" file or equivalent is required.


 



generate_alpharing-x_paper_data.py: Script that reproduces the data plotted in the manuscript. To run, the "alpharing-x_human_variant_summary.txt file" and the output of "train_alpharing-x_classifier.py" are required.
DOI: 10.26275/8ssx-gcil
title: Characterization of open-source Python package PyFibers to simulate electrical stimulation of model nerve fibers using NEURON

description: This dataset includes the data and code necessary to recreate all figures in the PyFibers publication. Generating the figures requires installation of PyFibers.
DOI: 10.5281/zenodo.17943140
title: Raw Crater Measurements and Classification for Ernutet, Ceres

description: One JMARS JLF file with raw crater measurements and count area shape files. Three CSV files with tables of the crater locations, diameters, degradation class, confidence feature is a crater, primary/secondary classification, and confidence of primary/secondary classification. Each file is for a separate count area of Ernutet: Ejecta 1, Ejecta 2, and the floor. Degradation class is on a scale of 1-4, with 1 being the freshest and 4 being the most degraded. Confidence scales go from 40%-100% confidence as assessed by the team. This data is associated with the paper "Formation age of Ernutet Crater, Ceres, and implications for origin of the organics" published in The Planetary Science Journal. Finally, we have included the python code to reproduce figures and create other cumulative plots.
DOI: 10.15468/dl.4xw5ue
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Adenomera kweti"
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053936-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p13emwrb
title: Experimental Data from an Examination of the Interaction of Grass Carp Eggs and Larvae with an Obliquely Oriented Bubble Screen in a Laboratory Flume

description: Behavioral deterrents targeting mature fish have been developed to control population expansion of invasive carp in non-native regions. However, there are currently no methods to control dispersal of early-life stage carp, which have no/limited mobility during their vulnerable, multi-day drift period in rivers. Capturing eggs and larvae in large numbers downstream of known spawning grounds warrants new methods that rely upon physics rather than behavioral response. This project tested a novel method using an oblique bubble screen (OBS) system redirect and concentrate downstream drifting eggs and larvae to one side of the channel for efficient removal in a laboratory setting. The effects of flow velocity and airflow rate on redirection of eggs, pre-gas bladder inflation (GBI) stage larvae, and dead larvae were examined. The same OBS configurations had demonstrated a high efficacy redirecting plastic spheres (egg surrogates) in a previous study (Prasad and others 2024). A detailed hydrodynamic characterization of the OBS was also completed. This data release contains hydrodynamic and egg and larval redirection data associated with the 2022 experiments examining the interaction of grass carp eggs and larvae with an obliquely oriented bubble screen in a recirculating laboratory flume. A detailed description of the data contained in this data release can be found in the associated metadata.

References cited:
Prasad, V., Suski, C. D., Jackson, P. R., George, A. E., Chapman, D. C., Fischer, J., and Tinoco, R. O., 2025, Limiting downstream dispersal of invasive carp egg surrogates using a laboratory-scale oblique bubble screen. Journal of Ecohydraulics, 9(1). https://doi.org/10.1080/24705357.2024.2332994.
DOI: 10.15468/dl.ntky8f
title: Occurrence Download

description: A dataset containing 254 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Czechia",
 "OccurrenceStatus is Present",
 "TaxonKey is Lutra lutra",
 "Year 2005-2025"
 ]
}

 The dataset includes 254 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053937-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wwv8yw
title: Occurrence Download

description: A dataset containing 200 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Palau",
 "OccurrenceStatus is Present",
 "TaxonKey is Charopidae"
 ]
}

 The dataset includes 200 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053939-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7agm3m
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Peru",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lepidium meyenii"
 ]
}

 The dataset includes 110 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053941-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48436/2m16c-a3702
title: K21-0703

description: Related work

This dataset is part of the digital documentation of the Tomb of Meret Neith, Umm el Qaab, Abydos, Egypt about 3000BC, its artefacts, and the reconstruction of the tomb. For an overview of the related work, please visit https://researchdata.tuwien.at/communities/meretneith/.

Archaeological information

Object name

Knife fragment

Object number(s)

LN709; K21-0703

Description

tip of bifacial flint knife

Location of object at time of photographs

MoTA storage

Find location

Tomb Y; context L9 S2

Bibliography

N/A

Technical Information

For imaging, Canon RAW and Apple RAW images were captured.

Physical properties


  
    
      Length (cm)
      N/A
    
    
      Width (cm)
      N/A
    
    
      Height (cm)
      N/A
    
    
      Weight (g)
      N/A
    
    
      Volume (cm3)
      N/A
    
    
      Density (g/cm3)
      N/A
    
  


Comments

none

Files overview


  
images_videos.zip contains photographs of the real object in RAW format.
  
[optional] exports_{H,M,L}Q.zip archives contain the scanned object as 3D model in OBJ format including MTL and texture files. HQ, MQ, and LQ refer to high, medium and low quality versions of the model.
  
[optional] {objectName}_report.pdf contains further technical information of the reconstruction process.
DOI: 10.48436/h3hmb-xch35
title: K21-0703

description: Related work

This dataset is part of the digital documentation of the Tomb of Meret Neith, Umm el Qaab, Abydos, Egypt about 3000BC, its artefacts, and the reconstruction of the tomb. For an overview of the related work, please visit https://researchdata.tuwien.at/communities/meretneith/.

Archaeological information

Object name

Knife fragment

Object number(s)

LN709; K21-0703

Description

tip of bifacial flint knife

Location of object at time of photographs

MoTA storage

Find location

Tomb Y; context L9 S2

Bibliography

N/A

Technical Information

For imaging, Canon RAW and Apple RAW images were captured.

Physical properties


  
    
      Length (cm)
      N/A
    
    
      Width (cm)
      N/A
    
    
      Height (cm)
      N/A
    
    
      Weight (g)
      N/A
    
    
      Volume (cm3)
      N/A
    
    
      Density (g/cm3)
      N/A
    
  


Comments

none

Files overview


  
images_videos.zip contains photographs of the real object in RAW format.
  
[optional] exports_{H,M,L}Q.zip archives contain the scanned object as 3D model in OBJ format including MTL and texture files. HQ, MQ, and LQ refer to high, medium and low quality versions of the model.
  
[optional] {objectName}_report.pdf contains further technical information of the reconstruction process.
DOI: 10.15468/dl.fkum55
title: Occurrence Download

description: A dataset containing 514434 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-6.52185 58.18665,0.00762 48.27305,11.4675 51.44983,15.33188 61.84503,1.47342 62.03308,-6.52185 58.18665))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Anguilla anguilla",
 "Year 2000-2025"
 ]
}

 The dataset includes 514434 records from 184 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053926-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dv992m
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Palau",
 "OccurrenceStatus is Present",
 "TaxonKey is Endodontidae"
 ]
}

 The dataset includes 86 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053942-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.19490.70088
title: Gamma-Ray Shielding: Attenuation Simulation Across Materials
DOI: 10.15468/dl.3pjp7y
title: Occurrence Download

description: A dataset containing 1934 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gorilla gorilla"
 ]
}

 The dataset includes 1934 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053943-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2mktyz
title: CCDC 2430212: Experimental Crystal Structure Determination

description: Related Article: V. A. Postnikov, G. A. Yurasik, A. A. Kulishov, N. I. Sorokina, T. A. Sorokin, A. S. Stepko, P. V. Lebedev-Stepanov|2025|Crystallogr.Rep.|70|738|doi:10.1134/S1063774525601194
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mktz0
title: CCDC 2430213: Experimental Crystal Structure Determination

description: Related Article: V. A. Postnikov, G. A. Yurasik, A. A. Kulishov, N. I. Sorokina, T. A. Sorokin, A. S. Stepko, P. V. Lebedev-Stepanov|2025|Crystallogr.Rep.|70|738|doi:10.1134/S1063774525601194
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mkv02
title: CCDC 2430214: Experimental Crystal Structure Determination

description: Related Article: V. A. Postnikov, G. A. Yurasik, A. A. Kulishov, N. I. Sorokina, T. A. Sorokin, A. S. Stepko, P. V. Lebedev-Stepanov|2025|Crystallogr.Rep.|70|738|doi:10.1134/S1063774525601194
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mkv13
title: CCDC 2430215: Experimental Crystal Structure Determination

description: Related Article: V. A. Postnikov, G. A. Yurasik, A. A. Kulishov, N. I. Sorokina, T. A. Sorokin, A. S. Stepko, P. V. Lebedev-Stepanov|2025|Crystallogr.Rep.|70|738|doi:10.1134/S1063774525601194
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mqrsx
title: CCDC 2434950: Experimental Crystal Structure Determination

description: Related Article: Hui-Fang Zhao, Zuo-Hu Zhou, Ni Zhen, Fang-Fang Liu, Si-Ming Qi, Jian Wei, Ze-Qi Yu, Ai-Bing Yang, Lei Zhang|2025|Small|21|e07562|doi:10.1002/smll.202507562
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mqrty
title: CCDC 2434951: Experimental Crystal Structure Determination

description: Related Article: Hui-Fang Zhao, Zuo-Hu Zhou, Ni Zhen, Fang-Fang Liu, Si-Ming Qi, Jian Wei, Ze-Qi Yu, Ai-Bing Yang, Lei Zhang|2025|Small|21|e07562|doi:10.1002/smll.202507562
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mqrvz
title: CCDC 2434952: Experimental Crystal Structure Determination

description: Related Article: Hui-Fang Zhao, Zuo-Hu Zhou, Ni Zhen, Fang-Fang Liu, Si-Ming Qi, Jian Wei, Ze-Qi Yu, Ai-Bing Yang, Lei Zhang|2025|Small|21|e07562|doi:10.1002/smll.202507562
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mqrw0
title: CCDC 2434953: Experimental Crystal Structure Determination

description: Related Article: Hui-Fang Zhao, Zuo-Hu Zhou, Ni Zhen, Fang-Fang Liu, Si-Ming Qi, Jian Wei, Ze-Qi Yu, Ai-Bing Yang, Lei Zhang|2025|Small|21|e07562|doi:10.1002/smll.202507562
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mqrx1
title: CCDC 2434954: Experimental Crystal Structure Determination

description: Related Article: Hui-Fang Zhao, Zuo-Hu Zhou, Ni Zhen, Fang-Fang Liu, Si-Ming Qi, Jian Wei, Ze-Qi Yu, Ai-Bing Yang, Lei Zhang|2025|Small|21|e07562|doi:10.1002/smll.202507562
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25345/c5k64b644
title: MassIVE MSV000100224 - Single-cell full-length transcriptome of human lung reveals genetic effects on isoform regulation beyond gene-level expression
title: Genetic regulation of splicing and isoform abundance uniquely contributes to trait-associated genome-wide association studies (GWAS) signals. However, quantitative trait loci (QTL) analysis using short-read sequencing of bulk tissues fail to capture full-length and novel isoforms or cell-type-specific splicing events. Here, we present an isoform-level lung cell atlas from 129 never-smoking Korean women using single-cell long-read RNA-sequencing. We identify 325,865 full-length isoforms from 360,133 lung cells, where 83% are novel isoforms not annotated in GENCODE v32. We identify isoform-level signatures of 37 lung cell types, where 67.2% of differential isoforms display larger expression differences than in gene levels. Isoform-QTLs (isoQTLs) identify cell-type-specific and novel isoforms, especially those from genes not detected in bulk tissue-based splicing-QTL (sQTL) studies. Compared to the barcode-matched short-read expression data, 46% of isoQTLs do not colocalize with eQTLs in the same cell type. Consistently, isoQTLs are distinctly enriched in the functional elements of splicing and post-transcriptional regulation. Colocalization of isoQTLs with lung function and cancer GWAS signals nominates candidate isoforms, where 69% are previously unreported at the gene level. Moreover, 71% of GWAS-colocalized isoforms were independent from eQTLs, including PPIL6-207 for lung cancer in multiciliated cells. TWAS of ancestry-matched lung adenocarcinoma identify 12 isoforms from sub-threshold GWAS regions, including lineage-specific genes. Convergence of target genes and cell types were observed between lung function and cancer GWASs, including MUC1 in epithelial cells. This isoform-level resource advances our understanding of cell-type-specific isoform regulation and its contribution to lung traits and diseases.
DOI: 10.5517/ccdc.csd.cc2mqry2
title: CCDC 2434955: Experimental Crystal Structure Determination

description: Related Article: Hui-Fang Zhao, Zuo-Hu Zhou, Ni Zhen, Fang-Fang Liu, Si-Ming Qi, Jian Wei, Ze-Qi Yu, Ai-Bing Yang, Lei Zhang|2025|Small|21|e07562|doi:10.1002/smll.202507562
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.