cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25824/redu/ysusc9
title: 06_1hrc_carga_5_min.pqr
DOI: 10.25824/redu/l8qb0s
title: High Performance Collision Cross Section Calculation – HPCCS

description: The High Performance Collision Cross Section (HPCCS) is a new software for fast and accurate calculation of CCS for molecular ions. Based on the Trajectory Method (TM), HPCCS was parallelized and optimized to be an user-friendly program.
DOI: 10.25824/redu/68mtod/shnkcp
title: BrazilianHidrography-Daltio-Neo4jgraph.db.dump

description: Dump file created using the DUMP command of the Neo4j system.
DOI: 10.25824/redu/68mtod
title: Graph database with the entire water drainage network of the Brazilian hidrography

description: This is a Neo4j ".dump" file of a graph database containing for the entire Brazilian hidrography network. The graph is structured as a property graph, with 620,280 vertices and 620,279 edges corresponding to the Brazilian catchment network. This graph was created from the official Brazilian Ottocoded Hidrography network, published by the Brazilian National Water Agency (ANA, Agência Nacional das Águas), version 2015, in the scale 1:250.000. Vertices correspond to drainage points, and edges represent water stretches between these points. Drainage points represent diverse geographic entities, such as a watercourse start/end point or a stream mouth point. The original ANA network is stored in a relational database, catalogued at the ANA portal under metadata file https://metadados.ana.gov.br/geonetwork/srv/pt/main.home?uuid=0f57c8a0-6a0f-4283-8ce3-114ba904b9fe . The original metadata standards follow Brazil’s INDE standards for georeferenced data, and the standards version is from 2013 (whereas the original data to create the graph is from 2014). This graph was created by the graph file author (Daltio) by transforming the ANA relational data into a Neo4j database, version 3.5.12. The transformation process (relational-to-property graph) and the description of the contents of nodes and vertices are available at Daltio’s thesis at http://repositorio.unicamp.br/jspui/handle/REPOSIP/325641 .( Views over Graph Databases: A Multifocus Approach for Heterogeneous Data) This dump file can be imported into a Neo4j database system using its “load” command.
DOI: 10.21223/koi5mq/dmvqph
title: Senescence.rar

description: :unav
DOI: 10.21223/koi5mq/1h7hhf
title: Other information.rar

description: :unav
DOI: 10.21223/koi5mq/ixknkw
title: DevelopmentTime.rar

description: :unav
DOI: 10.21223/koi5mq/diyqkz
title: Mortality.rar

description: :unav
DOI: 10.21223/koi5mq/lm9rij
title: DeterministicSimulation.rar

description: :unav
DOI: 10.21223/koi5mq/riuest
title: RelativeOviposition.rar

description: :unav
DOI: 10.21223/koi5mq/i2gkxi
title: TotalOviposition.rar

description: :unav
DOI: 10.21223/koi5mq/vm90y1
title: DevelopmentRate.rar

description: :unav
DOI: 10.21223/koi5mq
title: Tuta absoluta phenology model in ILCYM

description: The Insect Life Cycle Modeling software (ILCYM) assists in the development of phenology models. It also provides analytical tools for studying pest population ecology. The software consists of three modules. The "model builder" facilitates the development of insect phenology models based on experimental temperature-dependent life-table data of a specific pest. The ‘Validation and simulation module’ provides tools for validating the developed phenology model using insect life-tables established at fluctuating temperature conditions. It also provides tools for deterministic and stochastic simulations.
DOI: 10.6084/m9.figshare.13604348
title: A spectroscopic dataset for "hump and spike" stars

description: These are spectra for a sample of "hump and spike" stars. The data were collected with HERMES spectrograph mounted at the Cassegrain focus of the 1.2-m Mercator telescope located at La Palma, Spain. In a single exposure, this spectrograph records optical spectra in the wavelength (λ) range 377 to 900 nm across the 55 spectral orders. The resolving power of this instrument in the high-resolution mode is R = 85 000 with radial velocity stability of about 50 m/s, and excellent throughput.<br>
DOI: 10.6084/m9.figshare.13604348.v1
title: A spectroscopic dataset for "hump and spike" stars

description: These are spectra for a sample of "hump and spike" stars. The data were collected with HERMES spectrograph mounted at the Cassegrain focus of the 1.2-m Mercator telescope located at La Palma, Spain. In a single exposure, this spectrograph records optical spectra in the wavelength<br>(λ) range 377 to 900 nm across the 55 spectral orders. The resolving power of this instrument in the high-resolution mode is R = 85 000 with radial velocity stability of about 50 m/s, and excellent throughput.<br>
DOI: 10.5281/zenodo.4448197
title: Dataset for testing the calibration of the variant prediction methods

description: Dataset used for testing the calibration of 6 methods for predicting the impact of single nucleotide variants in the publication: <em>Benevenuta S, Capriotti E, Fariselli P</em>. (2021). Calibrating variant-scoring methods for clinical decision making. <strong>Bioinformatics</strong>. DOI: 10.1093/bioinformatics/btaa943. The file contains the following columns: CHROM: Chromosome number POS: Chromosome coordinate REF: Reference Allele ALT: Alternative Allele Coding: Coding Variants (Yes/No) Effect: Variant impact (Pathogenic/Benign) DANN: DANN output PhDSNP: PhD-SNPg output FATHMM: FATHMM output CADD: CADD output DeepSea: DeepSea output Eigen: Eigen output
description: Funding: Italian Ministry of Education, University and Research (MIUR-PRIN-201744NR8S).
DOI: 10.5281/zenodo.4448196
title: Dataset for testing the calibration of the variant prediction methods

description: Dataset used for testing the calibration of 6 methods for predicting the impact of single nucleotide variants in the publication: <em>Benevenuta S, Capriotti E, Fariselli P</em>. (2021). Calibrating variant-scoring methods for clinical decision making. <strong>Bioinformatics</strong>. DOI: 10.1093/bioinformatics/btaa943. The file contains the following columns: CHROM: Chromosome number POS: Chromosome coordinate REF: Reference Allele ALT: Alternative Allele Coding: Coding Variants (Yes/No) Effect: Variant impact (Pathogenic/Benign) DANN: DANN output PhDSNP: PhD-SNPg output FATHMM: FATHMM output CADD: CADD output DeepSea: DeepSea output Eigen: Eigen output
description: Funding: Italian Ministry of Education, University and Research (MIUR-PRIN-201744NR8S).
DOI: 10.6092/unibo/amsacta/6580
title: Decision support system for evaluating the performance of modal interchange

description: The tool represents the operationalization of an easy-to-use decision support system that allows decision-makers to rate and visualise the performance of a policy or a node (existing or future) against their attitude to boost an effective modal interchange. The tool is based on 52 Key Factors which have been weighted and grouped into 9 different domains, characterizing the modal interchange in urban contexts. The tool can support the analysis of current policies or node configuration, assessing the performance they have, identifying possible gaps and shortcomings that can lead to the definition of improvements to undertake, and forecast the performance of new interchange projects and/or policy changes, comparing different future scenarios. The tool has been developed in the framework of the Interreg Europe MATCJH-UP project.
DOI: 10.18112/openneuro.ds003479.v1.0.0
title: fMRI Food Regulation Study
DOI: 10.5281/zenodo.4448224
title: A Baseline of Terrestrial Freshwater and Nitrogen Fluxes to the Southern California Bight, USA

description: Terrestrial freshwater discharges into the Southern California Bight (SCB) contains nutrient and carbonate system constituents that make the region susceptible to eutrophication. This respository contains comprehensive time series discharge and constituent data of point and non-point sources, which consist of ocean outfalls, inland wastewater treatment plants, and rivers, to the SCB from the past twenty years and more. Constituents include nitrogen (N), phosphorus (P), carbon (C), iron (Fe), silica (Si) and carbonate system parameters. Many local and state government and non-government organization databases were accessed to construct this data set. In-house data that was previously not publicly available are published here as well. Predictive models and expert analysis addressed unmonitored sources and data gaps. The spreadsheet 'rivers_1997_2017_daily.xlsx' contains the data from 1997 to 2017 for 75 rivers alphabetically. River constituents include discharge volume, ammonium, nitrate, dissolved oxygen, temperature, pH, total N, total P, phosphate, organic P, total organic C, organic N, total Fe, alkalinity, salinity, dissolved Fe, total inorganic C, and silicate.<br> File 'major_potw_1971_2017.xlsx' contains data from 1971 to 2017 for the four large POTWs in the SCB, of which data before 2007 was not publicly available until now. Constituents in this file are discharge volume, ammonium, nitrate, nitrite, dissolved oxygen, temperature, biological oxygen demand, pH, TP, phosphate, OP, TOC, ON, TN, total Fe, silicate, alkalinity, salinity, and dissolved Fe. <br> The 'minor_potw_1997_2017.xlsx' contains data from 1997 to 2017 for the 19 minor POTWs alphabetically. Data from year 2000 was not publicly available until now. Constituents in this file are discharge volume, ammonium, nitrate, nitrite, dissolved oxygen, temperature, biological oxygen demand, pH, TP, phosphate, OP, TOC, ON, TN, total Fe, silicate, alkalinity, salinity, and dissolved Fe. <br> The 'inland_POTW.xlsx' file contains averaged data from the year 2009, unless otherwise noted, for the 18 inland POTWs. The region and city given for each plant. The discharge volume, TN, TP, dissolved inorganic N, and dissolved inorganic P are listed for each plant. <br> The 'natural_rivers.xlsx' file contains summarized annually averaged input of natural riverine sources for each region of the SCB. The approximate watershed area of each region is given and constituents in this file are TN, TP, DIN, and DIP.
DOI: 10.5281/zenodo.3981626
title: A Baseline of Terrestrial Freshwater and Nitrogen Fluxes to the Southern California Bight, USA

description: Terrestrial freshwater discharges into the Southern California Bight (SCB) contains nutrient and carbonate system constituents that make the region susceptible to eutrophication. This respository contains comprehensive time series discharge and constituent data of point and non-point sources, which consist of ocean outfalls, inland wastewater treatment plants, and rivers, to the SCB from the past twenty years and more. Constituents include nitrogen (N), phosphorus (P), carbon (C), iron (Fe), silica (Si) and carbonate system parameters. Many local and state government and non-government organization databases were accessed to construct this data set. In-house data that was previously not publicly available are published here as well. Predictive models and expert analysis addressed unmonitored sources and data gaps. The spreadsheet 'rivers_1997_2017_daily.xlsx' contains the data from 1997 to 2017 for 75 rivers alphabetically. River constituents include discharge volume, ammonium, nitrate, dissolved oxygen, temperature, pH, total N, total P, phosphate, organic P, total organic C, organic N, total Fe, alkalinity, salinity, dissolved Fe, total inorganic C, and silicate.<br> File 'major_potw_1971_2017.xlsx' contains data from 1971 to 2017 for the four large POTWs in the SCB, of which data before 2007 was not publicly available until now. Constituents in this file are discharge volume, ammonium, nitrate, nitrite, dissolved oxygen, temperature, biological oxygen demand, pH, TP, phosphate, OP, TOC, ON, TN, total Fe, silicate, alkalinity, salinity, and dissolved Fe. <br> The 'minor_potw_1997_2017.xlsx' contains data from 1997 to 2017 for the 19 minor POTWs alphabetically. Data from year 2000 was not publicly available until now. Constituents in this file are discharge volume, ammonium, nitrate, nitrite, dissolved oxygen, temperature, biological oxygen demand, pH, TP, phosphate, OP, TOC, ON, TN, total Fe, silicate, alkalinity, salinity, and dissolved Fe. <br> The 'inland_POTW.xlsx' file contains averaged data from the year 2009, unless otherwise noted, for the 18 inland POTWs. The region and city given for each plant. The discharge volume, TN, TP, dissolved inorganic N, and dissolved inorganic P are listed for each plant. <br> The 'natural_rivers.xlsx' file contains summarized annually averaged input of natural riverine sources for each region of the SCB. The approximate watershed area of each region is given and constituents in this file are TN, TP, DIN, and DIP.
DOI: 10.5281/zenodo.3753155
title: Raw Data to 'Decay and recurrence of non-Gaussian correlations in a quantum many-body system', arXiv:2003.01808

description: <strong>Absorption images</strong> representing the raw data for <strong>arXiv:2003.01808</strong>, Nature Physics (2021). https://doi.org/10.1038/s41567-020-01139-2 'scan5100.zip' contains the raw data for figure 2. 'scan8679.zip', 'scan8685.zip', and 'scan8696.zip' contain the raw data for the left, middle, and right subplot of figure 3 respectively. The absorption images are numbered consecutively. The first image (for all scans) is taken in the direction of the double-well (DW) separation with our 'transverse' imaging system. The measurement is performed before ramping up the DW barrier. The image is taken after 11 ms time of flight (TOF). Two images are taken. One image with atoms ('1-atomcloud.tif'), and a second image to record the intensity of the imaging beam without atoms ('1-withoutatoms.tif'). The subsequent images record the interference fringes for the different evolution times (again always pairs '-atomcloud.tif' and '-withoutatoms.tif'). They are taken with our 'vertical' imaging system after 15.6 ms TOF. The imaging direction is perpendicular to the weakly confined direction of the clouds as well as the DW separation. The recorded evolution times for scan 5100 are -2 ms (right before ramping the DW barrier up), 0 ms (right after the DW barrier is ramped up), and then in 3 ms steps until 18 ms. I.e., '2-atomcloud.tif' corresponds to -2 ms, '9-atomcloud.tif' corresponds to 18 ms. This completes the 'first repeat'. The next picture '10-atomcloud.tif' then belongs to the 'second repeat' and is again taken with the 'transverse' imaging system. The picture '11-atomcloud.tif' is then again taken with the 'vertical' imaging and corresponds to -2 ms. And so forth. In the same way, the pictures for the other scans are ordered, only the recorded evolution times are different. The evolution times are (in ms): scan 8679: -1.2, 0, 2.5, 5, 20 in steps of 2.5 until 32.5<br> scan 8685: -1.3, 0, 2.5, 5, 20 in steps of 2.5 until 32.5<br> scan 8696: -1.6, 0, 2.5, 5, 20 in steps of 2.5 until 32.5 The first time always corresponds to right before the DW barrier is ramped up. 0 is always right after the barrier was ramped up. Note that for scan 8696 only the repeats 1 to 193, 215 to 246, 262 to 281, and 295 to 330 have been used. For the other repeats the digital micromirror device (DMD) shaping the optical dipole potential has failed. In addition to the data a matlab script is provided, illustrating how to extract the two dimensional atomic density from the absorption images. It contains all relevant parameters of the imaging systems.
DOI: 10.5281/zenodo.3753154
title: Raw Data to 'Decay and recurrence of non-Gaussian correlations in a quantum many-body system', arXiv:2003.01808

description: <strong>Absorption images</strong> representing the raw data for <strong>arXiv:2003.01808</strong>, Nature Physics (2021). https://doi.org/10.1038/s41567-020-01139-2 'scan5100.zip' contains the raw data for figure 2. 'scan8679.zip', 'scan8685.zip', and 'scan8696.zip' contain the raw data for the left, middle, and right subplot of figure 3 respectively. The absorption images are numbered consecutively. The first image (for all scans) is taken in the direction of the double-well (DW) separation with our 'transverse' imaging system. The measurement is performed before ramping up the DW barrier. The image is taken after 11 ms time of flight (TOF). Two images are taken. One image with atoms ('1-atomcloud.tif'), and a second image to record the intensity of the imaging beam without atoms ('1-withoutatoms.tif'). The subsequent images record the interference fringes for the different evolution times (again always pairs '-atomcloud.tif' and '-withoutatoms.tif'). They are taken with our 'vertical' imaging system after 15.6 ms TOF. The imaging direction is perpendicular to the weakly confined direction of the clouds as well as the DW separation. The recorded evolution times for scan 5100 are -2 ms (right before ramping the DW barrier up), 0 ms (right after the DW barrier is ramped up), and then in 3 ms steps until 18 ms. I.e., '2-atomcloud.tif' corresponds to -2 ms, '9-atomcloud.tif' corresponds to 18 ms. This completes the 'first repeat'. The next picture '10-atomcloud.tif' then belongs to the 'second repeat' and is again taken with the 'transverse' imaging system. The picture '11-atomcloud.tif' is then again taken with the 'vertical' imaging and corresponds to -2 ms. And so forth. In the same way, the pictures for the other scans are ordered, only the recorded evolution times are different. The evolution times are (in ms): scan 8679: -1.2, 0, 2.5, 5, 20 in steps of 2.5 until 32.5<br> scan 8685: -1.3, 0, 2.5, 5, 20 in steps of 2.5 until 32.5<br> scan 8696: -1.6, 0, 2.5, 5, 20 in steps of 2.5 until 32.5 The first time always corresponds to right before the DW barrier is ramped up. 0 is always right after the barrier was ramped up. Note that for scan 8696 only the repeats 1 to 193, 215 to 246, 262 to 281, and 295 to 330 have been used. For the other repeats the digital micromirror device (DMD) shaping the optical dipole potential has failed. In addition to the data a matlab script is provided, illustrating how to extract the two dimensional atomic density from the absorption images. It contains all relevant parameters of the imaging systems.
DOI: 10.25934/00005154.1
title: IPD datapackage for study 'An Exploratory Study to Assess Two Doses of GSK2402968 in the Treatment of Ambulant Boys With Duchenne Muscular Dystrophy' included in Research Request: 'DMD - Dagenais'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.25934/00005153.1
title: IPD datapackage for study 'A Phase II, Double Blind, Exploratory, Parallel-group, Placebocontrolled Clinical Study to Assess Two Dosing Regimens of GSK2402968 for Efficacy, Safety, Tolerability and Pharmacokinetics in Ambulant Subjects With Duchenne Muscular Dystrophy' included in Research Request: 'DMD - Dagenais'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.15468/n9epy8
title: Taxonomic and nomenclatural changes in three species of Pterostichus Bonelli (Coleoptera: Carabidae) from the Far East

description: This dataset contains the digitized treatments in Plazi based on the original journal article Sasakawa, Kôji, Berlov, Oleg, Okuzaki, Yutaka (2020): Taxonomic and nomenclatural changes in three species of Pterostichus Bonelli (Coleoptera: Carabidae) from the Far East. Zootaxa 4822 (3): 416-424, DOI: https://doi.org/10.11646/zootaxa.4822.3.6
DOI: 10.5281/zenodo.4448258
title: Kinetic studies and the cofactor specificity in the tetrameric 6-phosphogluconate dehydrogenase from Gluconobacter oxidans

description: Here we present the results regarding the characterization of the kinetics parameters for NAD and NADP of the 6-phosphogluconate dehydrogenase from <em>Gluconobacter oxydans</em> at different concentration of 6PG. The raw data of kinetic parameters for NAD or NADP at different 6PG concentration, are represented in kcat and KM, with the units s<sup>-1</sup> and µM, respectively. Al the rest values as efficient constat is represent in s<sup>-1</sup>µM<sup>-1</sup>.
DOI: 10.15468/b3wsbc
title: Review of the genus Odontomutilla Ashmead, 1899 (Hymenoptera: Mutillidae) of the Indian subcontinent, with description of two new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Lelej, Arkady S., Terine, Joshua B., Kumar, Girish P., Das, Dipanwita, Sureshan, Pavittu M. (2020): Review of the genus Odontomutilla Ashmead, 1899 (Hymenoptera: Mutillidae) of the Indian subcontinent, with description of two new species. Zootaxa 4822 (2): 191-208, DOI: https://doi.org/10.11646/zootaxa.4822.2.3
DOI: 10.6084/m9.figshare.13604429
title: Sun protection habits in elite acuatic Sports Adecuated?

description: Elite acuatic sports sun protection habits <br>
DOI: 10.6073/pasta/ead637f72df3efc6300d508840bdef7b
title: Data from Translational Science Education Through Citizen Science

description: These data are associated with the publication: Translational Science Education Through Citizen Science.
DOI: 10.5063/7m06bs
title: Annual grassland plant species and biomass response to rainfall x grazing treatment, Sierra Foothill Research and Extension Center, California, 2012-2015

description: Data associated with the publication: Hallett, Lauren M., Claudia Stein, and Katharine N. Suding. “Functional Diversity Increases Ecological Stability in a Grazed Grassland.” Oecologia, January 17, 2017, 1–10. https://doi.org/10.1007/s00442-016-3802-3.Understanding the factors governing ecological stability in variable environments is a central focus of ecology. Functional diversity can stabilize ecosystem function over time if one group of species compensates for an environmentally-driven decline in another. Although intuitively appealing, evidence for this pattern is mixed. We hypothesized that diverse functional responses to rainfall will increase the stability of vegetation cover and biomass across rainfall conditions, but that this effect depends on land-use legacies that maintain functional diversity. We experimentally manipulated grazing in a California grassland to create land-use legacies of low and moderate grazing, across which we implemented rainout shelters and irrigation to create dry and wet conditions over three years. As such, the data include species composition and biomass data from plots that experienced a legacy of either low or moderate grazing, crossed with three rainfall treatments (drought, irrigated, and control) over three years.
DOI: 10.15468/47v8rg
title: Shallow-water black corals (Cnidaria: Anthozoa: Hexacorallia: Antipatharia) from SW Madagascar

description: This dataset contains the digitized treatments in Plazi based on the original journal article Terrana, Lucas, Bo, Marzia, Opresko, Dennis M., Eeckhaut, Igor (2020): Shallow-water black corals (Cnidaria: Anthozoa: Hexacorallia: Antipatharia) from SW Madagascar. Zootaxa 4826 (1): 1-62, DOI: https://doi.org/10.11646/zootaxa.4826.1.1