cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.dwdy6u
title: Occurrence Download

description: A dataset containing 130 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anolis litoralis Garrido, 1975)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 130 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035893-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ey883r
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Oncopagurus oimos Lemaitre, 1998"
 ]
}

 The dataset includes 5 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126959-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v6acdm
title: Occurrence Download

description: A dataset containing 58612 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "OccurrenceStatus is Present",
 "TaxonKey is Netta rufina (Pallas, 1773)",
 "Year 2000-2023"
 ]
}

 The dataset includes 58612 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035897-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11069379
title: Transposable elements in rice detected by TEF

description: Next generation sequence data of 'World Rice Core Collection' and 'Rice Core Collection of Japanese Landraces' distributing NARO genebank have been analyzed by the software 'Transposable Elements Finder'. This data is an additional supplementary data of the TEF paper.

Transposition evidences were detected by direct comparison of NGS short reads between Japonica rice Nipponbare (wrc01) and other cultivars. Nearby 21,000 kinds of head and tail sequence pairs of TE have been identified by TEF. Head and tail sequences of TE, chromosome number, position, and name of detected rice cultivar were listed.   



This version is TE list of Oryza sativa detected by TEFv1.4.

Positions of TE transpositions were mapped on Os-Nipponbare-Reference-IRGSP-1.0 distributed from The Rice Annotation Project Database.

Accession Numbers of NGS data are listed in Japanese page 'World Rice Core Collection' and in NCBI SRA page 'Rice Core Collection of Japanese Landraces'.

The TEF software is available at: https://github.com/akiomiyao/tef

Miyao, A., Yamanouchi, U. Transposable element finder (TEF): finding active transposable elements from next generation sequencing data. BMC Bioinformatics 23, 500 (2022). https://doi.org/10.1186/s12859-022-05011-3
DOI: 10.15468/dl.qvuexm
title: Occurrence Download

description: A dataset containing 145 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Paragona inchoata (Wileman, 1911)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 145 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0128759-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.8162657
title: Transposable elements in rice detected by TEF

description: Next generation sequence data of 'World Rice Core Collection' and 'Rice Core Collection of Japanese Landraces' distributing NARO genebank have been analyzed by the software 'Transposable Elements Finder'. This data is an additional supplementary data of the TEF paper. Transposition evidences were detected by direct comparison of NGS short reads between Japonica rice Nipponbare (wrc01) and other cultivars. Nearby 2000 kinds of head and tail sequence pairs of TE have been identified by TEF. Head and tail sequences of TE, chromosome number, position, and name of detected rice cultivar were listed. Positions of TE transpositions were mapped on Os-Nipponbare-Reference-IRGSP-1.0 distributed from The Rice Annotation Project Database. Accession Numbers of NGS data are listed in Japanese page 'World Rice Core Collection' and in NCBI SRA page 'Rice Core Collection of Japanese Landraces'. The TEF software is available at: https://github.com/akiomiyao/tef Miyao, A., Yamanouchi, U. Transposable element finder (TEF): finding active transposable elements from next generation sequencing data. <em>BMC Bioinformatics</em> <strong>23</strong>, 500 (2022). https://doi.org/10.1186/s12859-022-05011-3
description: {"references": ["Miyao, A, Yamanouchi, U (2022) Transposable element finder (TEF): finding active transposable elements from next generation sequencing data. BMC Bioinformatics 23, 500. https://doi.org/10.1186/s12859-022-05011-3"]}
DOI: 10.15468/dl.yu7k3q
title: Occurrence Download

description: A dataset containing 191 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cynomys ludovicianus (Ord, 1815)"
 ]
}

 The dataset includes 191 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035901-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gnvs43
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-94.1170400999999970 30.0786951000000009, -94.1170400999999970 30.0812768800000008, -94.1170400999999970 30.0834714000000005, -94.1170400999999970 30.0852786399999985, -94.1170400999999970 30.0873440700000003, -94.1170400999999970 30.0887640500000018, -94.1170400999999970 30.0913458300000016, -94.1170400999999970 30.0928949000000010, -94.1148429200000010 30.0928949000000010, -94.1110947800000019 30.0928949000000010, -94.1078636299999971 30.0928949000000010, -94.1041155000000060 30.0928949000000010, -94.1041155000000060 30.0907003899999985, -94.1041155000000060 30.0888931399999997, -94.1041155000000060 30.0861822699999983, -94.1041155000000060 30.0843750199999995, -94.1041155000000060 30.0811477899999993, -94.1041155000000060 30.0786951000000009, -94.1060541899999947 30.0786951000000009, -94.1083806200000055 30.0786951000000009, -94.1118702600000034 30.0786951000000009, -94.1151014099999941 30.0786951000000009, -94.1170400999999970 30.0786951000000009))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 32 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080616-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wwbyxd
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anolis luteosignifer Garman, 1888)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 43 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035934-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rhkdc3
title: Occurrence Download

description: A dataset containing 767 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Phyllodactylus leoni Torres-Carvajal, Carvajal-Campos Barnes, Nicholls & Pozo-Andrade, 2013, Phyllodactylus lanei Smith, 1935, Phyllodactylus peronii Fitzinger, 1843)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 767 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035978-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2abdfb
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-84.1798572000000007 39.7614467000000005, -84.1798572000000007 39.7623201700000024, -84.1798572000000007 39.7629024900000019, -84.1798572000000007 39.7638591500000018, -84.1798572000000007 39.7643166900000011, -84.1798572000000007 39.7651069699999979, -84.1798572000000007 39.7656060999999994, -84.1787352900000059 39.7656060999999994, -84.1780704699999944 39.7656060999999994, -84.1772394599999956 39.7656060999999994, -84.1762422399999934 39.7656060999999994, -84.1755774300000041 39.7656060999999994, -84.1745802100000020 39.7656060999999994, -84.1738738500000068 39.7656060999999994, -84.1730843800000059 39.7656060999999994, -84.1723780199999965 39.7656060999999994, -84.1712976999999967 39.7656060999999994, -84.1703835800000064 39.7656060999999994, -84.1695941199999993 39.7656060999999994, -84.1683060000000012 39.7656060999999994, -84.1683060000000012 39.7648158100000018, -84.1683060000000012 39.7643166900000011, -84.1683060000000012 39.7635264000000035, -84.1683060000000012 39.7629024900000019, -84.1683060000000012 39.7624033600000004, -84.1683060000000012 39.7614467000000005, -84.1689293000000021 39.7614467000000005, -84.1698849699999982 39.7614467000000005, -84.1710483899999957 39.7614467000000005, -84.1716301000000016 39.7614467000000005, -84.1726273200000037 39.7614467000000005, -84.1736245400000058 39.7614467000000005, -84.1743309000000011 39.7614467000000005, -84.1754527800000005 39.7614467000000005, -84.1762422399999934 39.7614467000000005, -84.1767823999999933 39.7614467000000005, -84.1778211700000014 39.7614467000000005, -84.1789845899999989 39.7614467000000005, -84.1798572000000007 39.7614467000000005))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 13 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102178-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zwspm9
title: Occurrence Download

description: A dataset containing 10508 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Antennaria alpina (L.) Gaertn."
 ]
}

 The dataset includes 10508 records from 161 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035967-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vwg5tb
title: Occurrence Download

description: A dataset containing 2000 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Medicago ×varia Martyn"
 ]
}

 The dataset includes 2000 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0119299-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rza2xs
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "CatalogNumber" : [
 "is MHNN-INSECTA-65.5433"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035660-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q6w4z5
title: Occurrence Download

description: A dataset containing 111 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-83.6837127999999950 32.8526899000000014, -83.6837127999999950 32.8533080600000034, -83.6837127999999950 32.8542352899999983, -83.6837127999999950 32.8550079899999972, -83.6837127999999950 32.8562443000000002, -83.6837127999999950 32.8569654799999995, -83.6837127999999950 32.8578412000000029, -83.6824250300000045 32.8578412000000029, -83.6808797000000055 32.8578412000000029, -83.6795919300000008 32.8578412000000029, -83.6789222900000027 32.8578412000000029, -83.6779951000000040 32.8578412000000029, -83.6767073299999993 32.8578412000000029, -83.6759346599999958 32.8578412000000029, -83.6751620000000003 32.8578412000000029, -83.6751620000000003 32.8566563999999985, -83.6751620000000003 32.8559352199999992, -83.6751620000000003 32.8548534500000002, -83.6751620000000003 32.8538746999999987, -83.6751620000000003 32.8526899000000014, -83.6758831500000042 32.8526899000000014, -83.6773769699999974 32.8526899000000014, -83.6784586899999994 32.8526899000000014, -83.6793343800000002 32.8526899000000014, -83.6804161099999959 32.8526899000000014, -83.6813432999999947 32.8526899000000014, -83.6823220099999929 32.8526899000000014, -83.6837127999999950 32.8526899000000014))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 111 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0102142-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pf8krg
title: Occurrence Download

description: A dataset containing 739 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bactrocera philippinensis Drew & Hancock, 1994"
 ]
}

 The dataset includes 739 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035666-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wkm79w
title: Occurrence Download

description: A dataset containing 713 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-122.4955657999999943 37.7796311000000031, -122.4955657999999943 37.7805634300000008, -122.4955657999999943 37.7811309300000033, -122.4955657999999943 37.7816173599999985, -122.4955657999999943 37.7821443300000013, -122.4955657999999943 37.7830766599999990, -122.4955657999999943 37.7836847000000020, -122.4946715199999971 37.7836847000000020, -122.4938584300000031 37.7836847000000020, -122.4928014099999984 37.7836847000000020, -122.4917850399999963 37.7836847000000020, -122.4912158799999986 37.7836847000000020, -122.4901588599999940 37.7836847000000020, -122.4890613000000030 37.7836847000000020, -122.4890613000000030 37.7831171999999995, -122.4890613000000030 37.7821443300000013, -122.4890613000000030 37.7815768299999988, -122.4890613000000030 37.7805634300000008, -122.4890613000000030 37.7796311000000031, -122.4895083800000037 37.7796311000000031, -122.4903214699999978 37.7796311000000031, -122.4909719500000023 37.7796311000000031, -122.4917037299999976 37.7796311000000031, -122.4923135500000058 37.7796311000000031, -122.4930859899999973 37.7796311000000031, -122.4935331899999937 37.7796311000000031, -122.4945495500000021 37.7796311000000031, -122.4955657999999943 37.7796311000000031))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 713 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080625-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nj4nnh
title: Occurrence Download

description: A dataset containing 212 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Camellia polyodonta F.C.How ex Hu"
 ]
}

 The dataset includes 212 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035670-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a7pu3s
title: Occurrence Download

description: A dataset containing 1784 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-122.4521761000000026 37.7564537000000016, -122.4521761000000026 37.7573709999999991, -122.4521761000000026 37.7580844499999984, -122.4521761000000026 37.7590017500000030, -122.4521761000000026 37.7602757699999998, -122.4521761000000026 37.7615497999999974, -122.4514613300000008 37.7615497999999974, -122.4504911500000048 37.7615497999999974, -122.4491635300000070 37.7615497999999974, -122.4479890899999930 37.7615497999999974, -122.4470699700000011 37.7615497999999974, -122.4463551999999993 37.7615497999999974, -122.4463551999999993 37.7606324999999998, -122.4463551999999993 37.7599700100000035, -122.4463551999999993 37.7591546299999976, -122.4463551999999993 37.7579315699999967, -122.4463551999999993 37.7574219600000021, -122.4463551999999993 37.7564537000000016, -122.4476316599999990 37.7564537000000016, -122.4490103400000010 37.7564537000000016, -122.4499294600000070 37.7564537000000016, -122.4511549599999967 37.7564537000000016, -122.4521761000000026 37.7564537000000016))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 1784 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0080630-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6pp975
title: Occurrence Download

description: A dataset containing 2801 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-14.14695 21.30232,150.40913 21.30232,150.40913 68.46018,-14.14695 68.46018,-14.14695 21.30232))",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Cricetulus Milne-Edwards, 1867, Cricetulus migratorius pulcher Ognev, 1924, Cricetulus barabensis (Pallas, 1773), Cricetulus longicaudatus (Milne-Edwards, 1867), Cricetulus alticola Thomas, 1917, Cricetulus sokolovi Orlov & Malygin, 1988, Cricetulus kamensis (Satunin, 1903))"
 ]
}

 The dataset includes 2801 records from 40 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035900-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4gsve5
title: Occurrence Download

description: A dataset containing 2862 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thracia villosiuscula (MacGillivray, 1827)"
 ]
}

 The dataset includes 2862 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0109512-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zz5q8n
title: Occurrence Download

description: A dataset containing 87 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anolis luteogularis Noble & Hassler, 1935)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 87 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035929-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y6saqd
title: Occurrence Download

description: A dataset containing 22877 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Anthoxanthum nipponicum Honda"
 ]
}

 The dataset includes 22877 records from 120 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0109514-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vp7gg8
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anredera densiflora Sperling"
 ]
}

 The dataset includes 23 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035896-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hf2fx4
title: Occurrence Download

description: A dataset containing 55 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Onesimoides castellatus Lowry & Stoddart, 1993"
 ]
}

 The dataset includes 55 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0126964-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mpwfxt
title: Occurrence Download

description: A dataset containing 218 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anredera tucumanensis (Lillo & Hauman) Sperling"
 ]
}

 The dataset includes 218 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035936-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qpj7q8
title: Occurrence Download

description: A dataset containing 480415 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Capsella bursa-pastoris (L.) Medik."
 ]
}

 The dataset includes 480415 records from 2107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035943-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tor8ap
title: Occurrence Download

description: A dataset listing the 455155 species recorded in GBIF matching the query:
{
 "Country" : [
 "is Mozambique"
 ]
}

 The dataset's 455155 records were derived from 510 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001904-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.