cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10360135
title: SAMPLER representations of FFPE TCGA-lung WSIs using tile-level features of the MMIL-Transformer model

description: Here we provide single-scale SAMPLER representations of the FFPE TCGA-lung (LUAD and LUSC) WSIs using tile-level features provided in https://github.com/hustvl/MMIL-Transformer. To learn more about SAMPLER please visit https://github.com/TheJacksonLaboratory/SAMPLER.
The SAMPLER representations are provided as a single python pickle file. This pickle file contains a dictionary where each key is a WSI ID and each entry is the SAMPLER representation of the WSI.
DOI: 10.5281/zenodo.10360134
title: SAMPLER representations of FFPE TCGA-lung WSIs using tile-level features of the MMIL-Transformer model

description: Here we provide single-scale SAMPLER representations of the FFPE TCGA-lung (LUAD and LUSC) WSIs using tile-level features provided in https://github.com/hustvl/MMIL-Transformer. To learn more about SAMPLER please visit https://github.com/TheJacksonLaboratory/SAMPLER.
The SAMPLER representations are provided as a single python pickle file. This pickle file contains a dictionary where each key is a WSI ID and each entry is the SAMPLER representation of the WSI.
DOI: 10.5281/zenodo.10360142
title: SAMPLER representations of CPTAC-BRCA WSIs using an InceptionV3 backbone pretrained on imagenet
DOI: 10.5281/zenodo.10360143
title: SAMPLER representations of CPTAC-BRCA WSIs using an InceptionV3 backbone pretrained on imagenet
DOI: 10.5519/qd.p1160031
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (28974 records)
DOI: 10.6084/m9.figshare.23301590
title: Assessing the global vulnerability of dryland birds to heatwaves

description: As global average surface temperature increases, extreme climatic events such as heatwaves are becoming more frequent and intense, which can drive biodiversity responses such as rapid population declines and/or shifts in species distributions. However, extreme climatic events are largely ignored in conservation plans. Birds are known to be susceptible to heatwaves, especially in dryland ecosystems. Understanding which birds are most vulnerable to heatwaves, and where these birds occur, can offer a scientific basis for adaptive management and conservation. We assessed the relative vulnerability of 1,196 dryland bird species to heatwaves using a trait-based approach. Among them, 888 bird species are estimated to be vulnerable to heatwaves (170 highly vulnerable, 8 extremely vulnerable), of which ~91% are currently considered non-threatened by the IUCN, which suggests that many species will likely become newly threatened with intensifying climate change. We identified the top three hotspot areas of heatwave-vulnerable species in Australia (208 species), Southern Africa (125 species) and Eastern Africa (99 species). Populations of vulnerable species recorded in the Living Planet Database were found to be declining significantly faster than those of non-vulnerable species (p = 0.048) after heatwaves occurred. In contrast, no significant difference in population trends between vulnerable and non-vulnerable species was detected when no heatwave occurred (p = 0.34). This suggests that our vulnerability framework correctly identified vulnerable species, and that heatwaves are already impacting the population trends of these species. Our findings will help prioritize heatwave-vulnerable birds in dryland ecosystems in risk mitigation and adaptation management as the frequency of heatwaves accelerates in the coming decades.
DOI: 10.6084/m9.figshare.23301590.v2
title: Assessing the global vulnerability of dryland birds to heatwaves

description: As global average surface temperature increases, extreme climatic events such as heatwaves are becoming more frequent and intense, which can drive biodiversity responses such as rapid population declines and/or shifts in species distributions. However, extreme climatic events are largely ignored in conservation plans. Birds are known to be susceptible to heatwaves, especially in dryland ecosystems. Understanding which birds are most vulnerable to heatwaves, and where these birds occur, can offer a scientific basis for adaptive management and conservation. We assessed the relative vulnerability of 1,194 dryland bird species to heatwaves using a trait-based approach. 886 bird species are estimated to be vulnerable to heatwaves (169 highly vulnerable, 8 extremely vulnerable). 91.2% (808/886) of bird species identified as vulnerable to heatwave impacts are currently considered non-threatened by the IUCN, which suggests that many species will likely become newly threatened with intensifying climate change. We identified the top three hotspot areas of vulnerable species in Australia (206 species), Southern Africa (124 species) and Eastern Africa (99 species,). Populations of vulnerable species recorded in the Living Planet Database were found to be declining significantly faster than those of non-vulnerable species (p = 0.044) after heatwaves occurred. In contrast, no significant difference in population trends between vulnerable and non-vulnerable species was detected when no heatwave occurred (p = 0.66). This suggests that our framework can correctly identify vulnerable species, and that heatwaves are already impacting the population trends of these vulnerable species. Our findings will help prioritize heatwave-vulnerable birds in dryland ecosystems in risk mitigation and adaptation management as the frequency of heatwaves accelerates in the coming decades.
DOI: 10.5281/zenodo.10020926
title: Investigating the role of Pseudomonas dye-decolorizing peroxidases in quinone redox cycling for bio-design of a DypB-based lignin degrading enzyme cocktail
DOI: 10.5281/zenodo.10020927
title: Investigating the novel role of Pseudomonas dye-decolorizing peroxidase in quinone redox cycling to bio-design of DypB-based lignin degrading enzyme cocktail
DOI: 10.5281/zenodo.10159956
title: Investigating the role of Pseudomonas dye-decolorizing peroxidases in quinone redox cycling for bio-design of a DypB-based lignin degrading enzyme cocktail
DOI: 10.5281/zenodo.10360179
title: Supplemental files for "Lateral and Temporal Constraints on The Depositional History of The Bonneville Salt Flats, Utah, USA"

description: Radiocarbon, strontium isotope, optically stimulated luminescence, X-ray diffraction, X-ray fluorescence, tephra microprobe, grain-size, ostracode, and diatom occurrence data, from the Bonneville Salt Flats as well as regional strontium isotope data.
DOI: 10.5281/zenodo.7535148
title: Supplemental files for "Lateral and Temporal Constraints on The Depositional History of The Bonneville Salt Flats, Utah, USA"

description: Radiocarbon, strontium isotope, optically stimulated luminescence, X-ray diffraction, X-ray fluorescence, tephra microprobe, grain-size, ostracode, and diatom occurrence data, from the Bonneville Salt Flats as well as regional strontium isotope data.
DOI: 10.5281/zenodo.7271699
title: Supplemental files for "Lateral and Temporal Constraints on The Depositional History of The Bonneville Salt Flats, Utah, USA"

description: Radiocarbon, strontium isotope, optically stimulated luminescence, X-ray diffraction, X-ray fluorescence, tephra microprobe, grain-size, ostracode, and diatom occurrence data, from the Bonneville Salt Flats as well as regional strontium isotope data.
DOI: 10.5281/zenodo.7271700
title: Supplemental files for "Lateral and Temporal Constraints on The Depositional History of The Bonneville Salt Flats, Utah, USA"

description: Radiocarbon, strontium isotope, optically stimulated luminescence, X-ray diffraction, X-ray fluorescence, tephra microprobe, and grain-size data, from the Bonneville Salt Flats as well as regional stratigraphy, and regional strontium isotope data.
DOI: 10.5281/zenodo.8303387
title: Supplemental files for "Lateral and Temporal Constraints on The Depositional History of The Bonneville Salt Flats, Utah, USA"

description: Radiocarbon, strontium isotope, optically stimulated luminescence, X-ray diffraction, X-ray fluorescence, tephra microprobe, grain-size, ostracode, and diatom occurrence data, from the Bonneville Salt Flats as well as regional strontium isotope data.
DOI: 10.57967/hf/1442
title: code-civil
DOI: 10.57967/hf/1443
title: code-sport
DOI: 10.57967/hf/1444
title: code-penal
DOI: 10.57967/hf/1445
title: code-securite-sociale
DOI: 10.6084/m9.figshare.24791241
title: TEST.sav

description: This is a test
DOI: 10.6084/m9.figshare.24791241.v1
title: TEST.sav

description: This is a test
DOI: 10.57967/hf/1446
title: code-consommation
DOI: 10.57967/hf/1447
title: code-douanes
DOI: 10.6084/m9.figshare.24791238
title: Exploring the Impact of TLR-2 Signaling on miRNA Dysregulation in Intervertebral Disc Degeneration

description: The dataset enclosed is discussed and displayed in the scientific article 'Exploring the Impact of TLR-2 Signaling on miRNA Dysregulation in Intervertebral Disc Degeneration'
DOI: 10.6084/m9.figshare.24791238.v1
title: Exploring the Impact of TLR-2 Signaling on miRNA Dysregulation in Intervertebral Disc Degeneration

description: The dataset enclosed is discussed and displayed in the scientific article 'Exploring the Impact of TLR-2 Signaling on miRNA Dysregulation in Intervertebral Disc Degeneration'
DOI: 10.6084/m9.figshare.24712842
title: The Role of miR-155 in Inflammation and Mechanosensing during Intervertebral Disc Degeneration

description: The dataset enclosed is discussed and displayed in the scientific article 'The Role of miR-155 in Inflammation and Mechanosensing during Intervertebral Disc Degeneration'
DOI: 10.25919/bepx-z022
title: Electrical conductivity inversions for Grass Patch and Splinter Rock, WA

description: This is a collection of electrical conductivity inversion products from publicly available airborne electromagnetic surveys over the Grass Patch and Splinter Rock prospects near Esperance, Western Australia. The inversions were conducted for OD6 Metals Ltd to ascertain if AEM could map REE prospects in their regions
DOI: 10.3886/e195728
title: The Language of Submission Full Dialogues

description: <br>These are the extended dialogues developed for an article entitled The Language of Submission: A Four-Way Duoethnography Exploring Translanguaging Pedagogy With Carceral Students’ Funds of Knowledge and Funds of Identity, from the Journal Innovation for Language Learning and Teaching.<br><br>We developed these dialogues by writing around and reconstructing our transcripts. We derived our findings from these dialogues. We make available these dialogues in their complete form to ensure our work is grounded in, and benefits from, a commitment to polyvocal representations of data and praxis. We have specifically crafted the following playscript with devices such as stage directions in italics, so that it could be read in a Reader’s Theater-style activity or be used as text in a number of different pedagogical contexts. <br>
DOI: 10.3886/e195728v1
title: The Language of Submission Full Dialogues

description: <br>These are the extended dialogues developed for an article entitled The Language of Submission: A Four-Way Duoethnography Exploring Translanguaging Pedagogy With Carceral Students’ Funds of Knowledge and Funds of Identity, from the Journal Innovation for Language Learning and Teaching.<br><br>We developed these dialogues by writing around and reconstructing our transcripts. We derived our findings from these dialogues. We make available these dialogues in their complete form to ensure our work is grounded in, and benefits from, a commitment to polyvocal representations of data and praxis. We have specifically crafted the following playscript with devices such as stage directions in italics, so that it could be read in a Reader’s Theater-style activity or be used as text in a number of different pedagogical contexts. <br>
DOI: 10.6084/m9.figshare.24787350.v1
title: Supplementary Materials.docx

description: <b><i>Interpretive Summary</i></b><i>Streptococcus thermophilus</i><i> </i>is regarded as a safe strain and routinely subjected to a variety of harsh circumstances throughout the manufacturing process. Among these stresses, oxidization is the most lethal for <i>S. thermophilus</i>. It was demonstrated that CovRst was able to bind to the <i>efeB</i> and <i>gshF</i> gene promoter regions. These two genes were upregulated as a result of the deletion of the <i>covRst</i> gene. When viewed in conjunction with the extracellular GSH level and survivability data, it was determined that CovRst functions as a negative regulator of <i>S. thermophilus</i> oxidative stress response. This result provides theoretical support for its production.
DOI: 10.6084/m9.figshare.24787350
title: Supplementary Materials.docx

description: <b><i>Interpretive Summary</i></b><i>Streptococcus thermophilus</i><i> </i>is regarded as a safe strain and routinely subjected to a variety of harsh circumstances throughout the manufacturing process. Among these stresses, oxidization is the most lethal for <i>S. thermophilus</i>. It was demonstrated that CovRst was able to bind to the <i>efeB</i> and <i>gshF</i> gene promoter regions. These two genes were upregulated as a result of the deletion of the <i>covRst</i> gene. When viewed in conjunction with the extracellular GSH level and survivability data, it was determined that CovRst functions as a negative regulator of <i>S. thermophilus</i> oxidative stress response. This result provides theoretical support for its production.
DOI: 10.5281/zenodo.10359822
title: Bathymetric elevation models of the Southern Hikurangi Subduction Margin, New Zealand

description: Multibeam bathymetric data compiled by the National Institute of Water and Atmospheric Research (NIWA), New Zealand, are presented for the southern Hikurangi Subduction Margin, New Zealand. These datasets cover the eastern continental slope of southern Wairarapa, North Island, and Marlborough, South Island, the adjacent northwestern slope of the Chatham Rise, and the southern Hikurangi Trough. The data were collected for scientific research purposes, primarily for the study of continental margin active tectonics and sedimentary systems associated with NIWA SSIF Programme Marine Geological Processes (and its predecessors).
Prominent features of the data are:

the numerous submarine canyons and gully systems that incise the continental slopes and deliver sediment from the shelf to the southern Hikurangi Trough. These include the Kaīkoura, Hurunui, Pegasus, Okains, and Pūkākī canyons of NE South Island, the Cook Strait Canyon and its numerous tributaries, and the Opouawe, Pahaua, Honeycomb, and Madden canyon systems of SE North Island;
Elongate bathymetric ridges along the Marlborough and Wairarapa continental slopes that result from seafloor uplift associated with tectonic thrust faults propagating beneath them;
The flat basin floor of the 2500-3000 m deep Hikurangi Trough, incised by the meandering Hikurangi Channel; and
Mernoo Bank on the crest of the Chatham Rise.
Bathymetric Data
Two separate bathymetric data sets are provided, covering northern and southern regions. The northern dataset is presented at a 50 m grid resolution, and the southern at 25 m grid resolution. Both datasets are compilations of available multibeam bathymetric data collected on multiple voyages. Primarily, the bathymetric data was collected by NIWA on the RV Tangaroa using Kongsberg 30 kHz (EM300 and EM302) multibeam echo sounders, with some additional data collected by German and US vessels using 12 kHz multibeam echo sounders.
List of data sets

32-bit float GeoTIFF grid of offshore Marlborough bathymetry, New Zealand, at 25 m cell size. (WGS 84 / Mercator 41 EPSG:3994 projection)
32-bit float GeoTIFF grid of offshore Wairarapa bathymetry, New Zealand, at 50 m cell size. (WGS 84 / UTM zone 60S EPSG:32760 projection)
DOI: 10.5281/zenodo.10359823
title: Bathymetric elevation models of the Southern Hikurangi Subduction Margin, New Zealand

description: Multibeam bathymetric data compiled by the National Institute of Water and Atmospheric Research (NIWA), New Zealand, are presented for the southern Hikurangi Subduction Margin, New Zealand. These datasets cover the eastern continental slope of southern Wairarapa, North Island, and Marlborough, South Island, the adjacent northwestern slope of the Chatham Rise, and the southern Hikurangi Trough. The data were collected for scientific research purposes, primarily for the study of continental margin active tectonics and sedimentary systems associated with NIWA SSIF Programme Marine Geological Processes (and its predecessors).
Prominent features of the data are:

the numerous submarine canyons and gully systems that incise the continental slopes and deliver sediment from the shelf to the southern Hikurangi Trough. These include the Kaīkoura, Hurunui, Pegasus, Okains, and Pūkākī canyons of NE South Island, the Cook Strait Canyon and its numerous tributaries, and the Opouawe, Pahaua, Honeycomb, and Madden canyon systems of SE North Island;
Elongate bathymetric ridges along the Marlborough and Wairarapa continental slopes that result from seafloor uplift associated with tectonic thrust faults propagating beneath them;
The flat basin floor of the 2500-3000 m deep Hikurangi Trough, incised by the meandering Hikurangi Channel; and
Mernoo Bank on the crest of the Chatham Rise.
Bathymetric Data
Two separate bathymetric data sets are provided, covering northern and southern regions. The northern dataset is presented at a 50 m grid resolution, and the southern at 25 m grid resolution. Both datasets are compilations of available multibeam bathymetric data collected on multiple voyages. Primarily, the bathymetric data was collected by NIWA on the RV Tangaroa using Kongsberg 30 kHz (EM300 and EM302) multibeam echo sounders, with some additional data collected by German and US vessels using 12 kHz multibeam echo sounders.
List of data sets

32-bit float GeoTIFF grid of offshore Marlborough bathymetry, New Zealand, at 25 m cell size. (WGS 84 / Mercator 41 EPSG:3994 projection)
32-bit float GeoTIFF grid of offshore Wairarapa bathymetry, New Zealand, at 50 m cell size. (WGS 84 / UTM zone 60S EPSG:32760 projection)
DOI: 10.25442/hku.23701866
title: Supporting data for "HRHD-HK: A Benchmark Dataset of High-Rise and High-Density Urban Scenes for 3D Semantic Segmentation of Photogrammetric Point Clouds"

description: <b>HRHD-HK: A Benchmark Dataset of High-Rise and High-Density Urban Scenes for 3D Semantic Segmentation of Photogrammetric Point Clouds</b>This is the official repository of the HRHD-HK dataset. For technical details, please refer to:Li, M., Wu, Y., Yeh, A. G. O., & Xue, F. (2023). HRHD-HK: A benchmark dataset of high-rise and high-density urban scenes for 3D semantic segmentation of photogrammetric point cloud. <i>Proceedings of 2023 IEEE International Conference on Image Processing Challenges and Workshops</i>, 3714-3718. IEEE. https://doi.org/10.1109/ICIPC59416.2023.10328383<br><b>Overview of HRHD-HK</b>This paper presents a benchmark dataset of high-rise high-density urban point clouds, namely High-Rise, High-Density urban scenes of Hong Kong (HRHD-HK) for 3D semantic segmentation.The semantic labels of HRHD-HK include 1) building, 2) vegetation, 3) road, 4) waterbody, 5) facility, 6) terrain, and 7) vehicle.Point clouds of HRHD-HK were collected in HK with two features, i.e., color and coordinates in the HK 1980 Grid system (EPSG:2326).HRHD-HK arranged in 150 tiles, contains approximately 273 million points, covering 9.375 km<sup>2</sup>.Each tile of point clouds was saved in the "ply" format with seven channels, i.e., x, y, z, red, green, blue, and label.HRHD-HK aims to supplement the existing benchmark datasets with Asian HRHD urban scenes as well as subtropical natural landscapes, such as sea, vegetation, and mountains.For any inquiries, please feel free to contact Maosu at maosulee@connect.hku.hk or Dr. Frank at xuef@hku.hk.Please cite our paper, if you find our work useful for your research.<br>
DOI: 10.25442/hku.23701866.v1
title: Supporting data for "HRHD-HK: A Benchmark Dataset of High-Rise and High-Density Urban Scenes for 3D Semantic Segmentation of Photogrammetric Point Clouds"

description: <strong>HRHD-HK: A Benchmark Dataset of High-Rise and High-Density Urban Scenes for 3D Semantic Segmentation of Photogrammetric Point Clouds</strong>
This is the official repository of the HRHD-HK dataset. For technical details, please refer to:
Li, M., Wu, Y., Yeh, A. G. O., & Xue, F. (2023). HRHD-HK: A benchmark dataset of high-rise and high-density urban scenes for 3D semantic segmentation of photogrammetric point clouds [Preprint]. arXiv:2307.07976. doi: 10.48550/arXiv.2307.07976<br>

<strong>Overview of HRHD-HK</strong>
This paper presents a benchmark dataset of high-rise hig-density urban point clouds, namely High-Rise, High-Density urban scenes of Hong Kong (HRHD-HK) for 3D semantic segmentation. 

 The semantic labels of HRHD-HK include 1) building, 2) vegetation, 3) road, 4) waterbody, 5) facility, 6) terrain, and 7) vehicle.
 Point clouds of HRHD-HK were collected in HK with two features, i.e., color and coordinates in the HK 1980 Grid system (EPSG:2326).
 HRHD-HK arranged in 150 tiles, contain approximately 273 million points, covering 9.375 km<sup>2</sup>.
 Each tile of point clouds was saved in the "ply" format with seven channels, i.e., x, y, z, red, green, blue, and label.
 HRHD-HK aims to supplement the existing benchmark datasets with Asian HRHD urban scenes as well as subtropical natural landscapes, such as sea, vegetation, and mountains.

<br>
For any inquiries, please feel free to contact Maosu at maosulee@connect.hku.hk or Dr. Frank at xuef@hku.hk.
Please cite our paper, if you find our work useful for your research.
<br>
DOI: 10.25442/hku.23701866.v2
title: Supporting data for "HRHD-HK: A Benchmark Dataset of High-Rise and High-Density Urban Scenes for 3D Semantic Segmentation of Photogrammetric Point Clouds"

description: <b>HRHD-HK: A Benchmark Dataset of High-Rise and High-Density Urban Scenes for 3D Semantic Segmentation of Photogrammetric Point Clouds</b>This is the official repository of the HRHD-HK dataset. For technical details, please refer to:Li, M., Wu, Y., Yeh, A. G. O., & Xue, F. (2023). HRHD-HK: A benchmark dataset of high-rise and high-density urban scenes for 3D semantic segmentation of photogrammetric point cloud. <i>Proceedings of 2023 IEEE International Conference on Image Processing Challenges and Workshops</i>, 3714-3718. IEEE. https://doi.org/10.1109/ICIPC59416.2023.10328383<br><b>Overview of HRHD-HK</b>This paper presents a benchmark dataset of high-rise high-density urban point clouds, namely High-Rise, High-Density urban scenes of Hong Kong (HRHD-HK) for 3D semantic segmentation.The semantic labels of HRHD-HK include 1) building, 2) vegetation, 3) road, 4) waterbody, 5) facility, 6) terrain, and 7) vehicle.Point clouds of HRHD-HK were collected in HK with two features, i.e., color and coordinates in the HK 1980 Grid system (EPSG:2326).HRHD-HK arranged in 150 tiles, contains approximately 273 million points, covering 9.375 km<sup>2</sup>.Each tile of point clouds was saved in the "ply" format with seven channels, i.e., x, y, z, red, green, blue, and label.HRHD-HK aims to supplement the existing benchmark datasets with Asian HRHD urban scenes as well as subtropical natural landscapes, such as sea, vegetation, and mountains.For any inquiries, please feel free to contact Maosu at maosulee@connect.hku.hk or Dr. Frank at xuef@hku.hk.Please cite our paper, if you find our work useful for your research.<br>