cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7924733
title: Time series of biogeochemical data acquired at LTER-MC, Gulf of Naples (1984-2019)

description: The database includes biogeochemical data collected at ten depths (0, -2, -5, -10, -20, -30, -40, -50, -60, - 70 m) at the LTER-MC station in the Gulf of Naples (Tyrrhenian Sea, Western Mediterranean Sea) during the 1984-2019 period. Temperature (°C) : TEMP Salinity: PSAL Nutrient concentrations (mmol m<sup>-3</sup>): NH<sub>4</sub><sup>+</sup><sub> </sub>: AMON; NO<sub>3</sub> <sup>-</sup>: NTRA; NO<sub>2</sub><sup>-</sup> : NTRI; PO<sub>4</sub><sup>3-</sup> : PHOS; Si(OH)<sub>4</sub>: SLCA. Chlorophyll a (mg m-<sup>3</sup>) : CHLT The methods used for data collection, analysis and quality control are reported in Sabia et al. (2019), https://doi.org/10.12681/mms.15935
DOI: 10.5281/zenodo.4558662
title: Global Soil Temperature code and data

description: Version 2 - updated and corrected data.
DOI: 10.5281/zenodo.4558663
title: Global Soil Temperature code and data

description: This collection contains all code and data to reproduce the soil offset maps and soil bioclimatic variable, and uncertainty analyses The following files are available: 20201215_SoilT_monthtlyVals_Sampled_gapfilled.csv: temperature logger locations with sampled covariate data 20201215_SoilTemp_monthly_cleaned.csv: observations 20200422_soilT_data_processing.R: to process and combine the above two csv files 20201215_soilT_pipeline.py: mapping pipeline 20201215_PCA_ConvexHull_IntExt.ipynb: spatial assessment of interpolation vs. extrapolation 20210118_spatial_leave_one_out.py: spatial leave-one-out cross-validation analysis 202101018_soilT_part_dep_plots.R: partial dependence plots 20210126_Bioclim_calcs_0_5cm.js: bioclimatic variable calculations at 0-5cm 20210126_Bioclim_calcs_5_15cm.js: bioclimatic variable calculations at 5-15cm 20210224_Fig1_FigS1_FigS4.R: to analyze the yearly mean data 20210224_SoilTemp_Annual.txt: yearly observations
DOI: 10.5281/zenodo.7970893
title: Global Soil Temperature code and data

description: Version 2 - updated and corrected data.
DOI: 10.5519/qd.gt1q1m6v
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.5281/zenodo.7985086
title: BeMAGIC_Nanoporous films and ultra-thin films for magneto-ionics and surface charging experiments

description: BeMAGIC ITN (GA861145) Nanoporous films and ultra-thin films for magneto-ionics and surface charging experiments. Results from TUC, UCAM, AALTO and KIT
DOI: 10.5281/zenodo.7985085
title: BeMAGIC_Nanoporous films and ultra-thin films for magneto-ionics and surface charging experiments

description: BeMAGIC ITN (GA861145) Nanoporous films and ultra-thin films for magneto-ionics and surface charging experiments. Results from TUC, UCAM, AALTO and KIT
DOI: 10.6084/m9.figshare.23260061
title: Frequency and Clinical Impact of <em>BRAF</em> and <em>RAS</em> Mutations in Follicular Variant Papillary Thyroid Carcinoma

description: <strong>Background and aims: </strong>Inconsistent findings have been reported regarding the frequency and clinical impact of <em>BRAF</em> and <em>RAS</em> mutations in Follicular Variant Papillary Thyroid Carcinoma (FVPTC). <strong>Materials and methods: </strong>We systematically searched the PubMed and Embase libraries and The Cancer Genome Atlas Program (TCGA) and The International Cancer Genome Consortium (ICGC) databases. One part focused on the frequency distribution of <em>BRAF</em> and <em>RAS</em> gene mutations in FVPTC and its various histological subtypes, while another explored their clinical associations. <strong>Results:</strong> Our meta-analysis comprised a large sample size of 10,902 FVPTC patients, including 2,370 cases with relevant mutation-related clinical information. The overall mutation rates for <em>BRAF</em> and <em>RAS</em> in FVPTC were found to be 19.9% and 35.3%, with the highest incidence of <em>BRAF</em> (31.0%) and <em>RAS</em> (37.5%) mutations observed in invasive FVPTC and non-invasive follicular thyroid neoplasm with papillary-like nuclear features (NIFTP), respectively. No significant gender or age differences were documented between patients with mutated versus wild-type FVPTCs. In comparison to wild-type patients, those with <em>BRAF</em> mutations were significantly associated with tumor multifocality (OR 1.65; 95% CI, 1.21-2.25; P&lt;0.01), extrathyroidal extension (OR 2.82; 95% CI, 1.61-4.94; P&lt;0.01), lymph node metastasis (OR 2.41; 95% CI, 1.49-3.91; P&lt;0.01), advanced TNM stage (OR 3.11; 95% CI, 2.03-4.78; P&lt;0.01), and tumor recurrence (OR 3.42; 95% CI, 1.86-6.28; P&lt;0.01). Conversely, no significant associations were identified in patients with <em>RAS</em> mutations. <strong>Conclusion: </strong>As highlighted by our meta-analysis, <em>RAS</em> mutations were found to be more prevalent in FVPTC than <em>BRAF</em> mutations. Interestingly, while the frequency of <em>BRAF</em> mutations was higher in invasive subtypes, benign exhibited the opposite trend with<em> RAS</em> mutations being more commonly identified. Furthermore, we also noted that FVPTC patients with <em>BRAF</em> mutations had a higher risk of poor clinical outcomes, while <em>RAS</em> mutations did not show similar associations. <strong>Keywords: </strong>Follicular Variant Papillary Thyroid Carcinoma, <em>BRAF, RAS,</em> Frequency, Histology, Clinical feature, Meta-Analysis
DOI: 10.6084/m9.figshare.23260061.v1
title: Frequency and Clinical Impact of <em>BRAF</em> and <em>RAS</em> Mutations in Follicular Variant Papillary Thyroid Carcinoma

description: <strong>Background and aims: </strong>Inconsistent findings have been reported regarding the frequency and clinical impact of <em>BRAF</em> and <em>RAS</em> mutations in Follicular Variant Papillary Thyroid Carcinoma (FVPTC). <strong>Materials and methods: </strong>We systematically searched the PubMed and Embase libraries and The Cancer Genome Atlas Program (TCGA) and The International Cancer Genome Consortium (ICGC) databases. One part focused on the frequency distribution of <em>BRAF</em> and <em>RAS</em> gene mutations in FVPTC and its various histological subtypes, while another explored their clinical associations. <strong>Results:</strong> Our meta-analysis comprised a large sample size of 10,902 FVPTC patients, including 2,370 cases with relevant mutation-related clinical information. The overall mutation rates for <em>BRAF</em> and <em>RAS</em> in FVPTC were found to be 19.9% and 35.3%, with the highest incidence of <em>BRAF</em> (31.0%) and <em>RAS</em> (37.5%) mutations observed in invasive FVPTC and non-invasive follicular thyroid neoplasm with papillary-like nuclear features (NIFTP), respectively. No significant gender or age differences were documented between patients with mutated versus wild-type FVPTCs. In comparison to wild-type patients, those with <em>BRAF</em> mutations were significantly associated with tumor multifocality (OR 1.65; 95% CI, 1.21-2.25; P&lt;0.01), extrathyroidal extension (OR 2.82; 95% CI, 1.61-4.94; P&lt;0.01), lymph node metastasis (OR 2.41; 95% CI, 1.49-3.91; P&lt;0.01), advanced TNM stage (OR 3.11; 95% CI, 2.03-4.78; P&lt;0.01), and tumor recurrence (OR 3.42; 95% CI, 1.86-6.28; P&lt;0.01). Conversely, no significant associations were identified in patients with <em>RAS</em> mutations. <strong>Conclusion: </strong>As highlighted by our meta-analysis, <em>RAS</em> mutations were found to be more prevalent in FVPTC than <em>BRAF</em> mutations. Interestingly, while the frequency of <em>BRAF</em> mutations was higher in invasive subtypes, benign exhibited the opposite trend with<em> RAS</em> mutations being more commonly identified. Furthermore, we also noted that FVPTC patients with <em>BRAF</em> mutations had a higher risk of poor clinical outcomes, while <em>RAS</em> mutations did not show similar associations. <strong>Keywords: </strong>Follicular Variant Papillary Thyroid Carcinoma, <em>BRAF, RAS,</em> Frequency, Histology, Clinical feature, Meta-Analysis
DOI: 10.6084/m9.figshare.23259986
title: NGS Raw Data of SuFEx in vitro selection #2022

description: This zip file contains the NGS raw data (fastq format, including R1 and R2) of the winner sequences identified by the SuFEx in vitro selection. After unzipping, in the folder or file names, SF and OSF means phenylsulfonyl fluoride and phenylfluorosulfate as reactive groups, respectively. S1, RBD and hC5 represents the protein target.
DOI: 10.5281/zenodo.7984598
title: IWandDroid

description: IWandDroid artifacts for ISSRE 2023
DOI: 10.5281/zenodo.7984597
title: IWandDroid

description: IWandDroid artifacts for ISSRE 2023
DOI: 10.5281/zenodo.7985082
title: IWandDroid

description: IWandDroid artifacts for ISSRE 2023
DOI: 10.5281/zenodo.7985107
title: IWandDroid

description: IWandDroid artifacts for ISSRE 2023
DOI: 10.57745/wy1emn
title: Displacements_quantum.txt

description: :unav
DOI: 10.57745/dmpnrc
title: Read_me_first.txt

description: :unav
DOI: 10.57745/pjndmj
title: Model_presentation.pdf

description: :unav
DOI: 10.57745/pllq7a
title: Acc_PPT_LMS.txt

description: :unav
DOI: 10.57745/pxdwyu
title: Model_presentation.pdf

description: :unav
DOI: 10.57745/vbfdwh
title: Read_me_first.txt

description: :unav
DOI: 10.15151/esrf-es-1163229127
title: Austrian Crystallographic Diffraction Consortium

description: This proposed Austrian Crystallographic.... TO BE FILLED IN
DOI: 10.48420/23219804
title: N2 adsorption isotherms and associated data

description: N2 porosimetry of SiO2, NiO/SiO2 and NiO@PdO/SiO2 materials
DOI: 10.5281/zenodo.4487118
title: Koranic Science, a Commentary [IO Islamic 796] سواطع الالهام

description: al-Qurʼān القرآن الكريم <strong>This manuscript is now IO Islamic 796 in the India Office collections.</strong> <strong>[metadata:</strong> <strong>Otto Loth, </strong><strong><em>A Catalogue of the Arabic Manuscripts in the Library of the India Office</em>, (volume 1), no. 105 here with further notations and hyperlinks]</strong>. 105. 796. Size 10 in. by 6<sup>3/4</sup> in.; foll. 226. Fifteen lines in a page. تفسیر سواطع الالهام للشیخ العلامة فیضی افاض الله علیه نعیم دار السلام. Two fragments of the preceding work. The first contains the beginning as far as Sû. 5, 65. The other (fol. 176) comprises from Sû. 17, 1 to Sû. 21, 36, and terminates abruptly. Written in different ways; more correct than the preceding MS. The text of the first portion has all the vowels. Some of the names which are paraphrased in the introduction are added between the lines. [Warren Hastings.]
DOI: 10.5281/zenodo.4487117
title: Koranic Science, a Commentary [IO Islamic 796] سواطع الالهام

description: al-Qurʼān القرآن الكريم <strong>This manuscript is now IO Islamic 796 in the India Office collections.</strong> <strong>[metadata:</strong> <strong>Otto Loth, </strong><strong><em>A Catalogue of the Arabic Manuscripts in the Library of the India Office</em>, (volume 1), no. 105 here with further notations and hyperlinks]</strong>. 105. 796. Size 10 in. by 6<sup>3/4</sup> in.; foll. 226. Fifteen lines in a page. تفسیر سواطع الالهام للشیخ العلامة فیضی افاض الله علیه نعیم دار السلام. Two fragments of the preceding work. The first contains the beginning as far as Sû. 5, 65. The other (fol. 176) comprises from Sû. 17, 1 to Sû. 21, 36, and terminates abruptly. Written in different ways; more correct than the preceding MS. The text of the first portion has all the vowels. Some of the names which are paraphrased in the introduction are added between the lines. [Warren Hastings.]
DOI: 10.48420/23224397
title: XPS of NiO@PdO/SiO2 as prepared and after thermal reduction in H2

description: XPS of NiO@PdO/SiO2 as prepared and after thermal reduction in H2
DOI: 10.48420/23223803
title: Temperature programmed reduction dataset for NiO/SiO2 and NiO@PdO/SiO2

description: Temperature programmed reduction dataset for NiO/SiO2 and NiO@PdO/SiO2
DOI: 10.48420/23223803.v1
title: Temperature programmed reduction dataset for NiO/SiO2 and NiO@PdO/SiO2

description: Temperature programmed reduction dataset for NiO/SiO2 and NiO@PdO/SiO2
DOI: 10.5281/zenodo.6536246
title: Main sediment profiles and 3D-pdf from archaeological wetland excavation at Immensee-Dorfplatz

description: These are a 3D model and the longest and most representative sediment profiles through the waterlogged Late Neolithic lakeside site of Immensee-Dorfplatz (SZ).
description: {"references": ["Bleicher, N., Gleich, P., Ries, M.-C., Isler, M., Gross, E., 2020. Durch diese Hohle Gasse muss er kommen, der gr\u00fcne Stein vom Gotthard.: Ein Werkstattbericht aus der neolithischen Pfahlbausiedlung in Immensee SZ-Dorfplatz. Mitteilungen des Historischen Vereins Schwyz 113, 19\u201354."]}
DOI: 10.5281/zenodo.6536245
title: Main sediment profiles and 3D-pdf from archaeological wetland excavation at Immensee-Dorfplatz

description: These are a 3D model and the longest and most representative sediment profiles through the waterlogged Late Neolithic lakeside site of Immensee-Dorfplatz (SZ).
description: {"references": ["Bleicher, N., Gleich, P., Ries, M.-C., Isler, M., Gross, E., 2020. Durch diese Hohle Gasse muss er kommen, der gr\u00fcne Stein vom Gotthard.: Ein Werkstattbericht aus der neolithischen Pfahlbausiedlung in Immensee SZ-Dorfplatz. Mitteilungen des Historischen Vereins Schwyz 113, 19\u201354."]}
DOI: 10.7910/dvn/hdl2mq
title: Replication Data for: Infectious Disease and Political Violence: Evidence from Malaria and Civil Conflicts in Sub-Saharan Africa

description: Replication Data for: Infectious Disease and Political Violence: Evidence from Malaria and Civil Conflicts in Sub-Saharan Africa
DOI: 10.6084/m9.figshare.19477598
title: Kolmancic-Zivin-Zorovic_E2_L-dopa_data2022.sav

description: The data are the results of behavioural testing and immunohistochemistry from a study on the effects of estrogen on the development of levodopa-induced dyskinesias in a hemiparkinsonian postmenopausal rat model. The animal study protocol was approved by the Republic of Slovenia's Administration for Food Safety, Veterinary Sector and Plant Protection (ref. no. U34401-7/2017/9). The rats were overiectomized at the start of the experiment. Two weeks following the 6-OHDA lesion of dopaminergic neurons in the right hemisphere and implantation of either empty (control) or estradiol implants, the animals started recieiving daily injections of either levodopa or saline (control). Animals were divided into four tratment groups: animals with estradiol implants and daily levodopa injections, animals with empty implants and daily levodopa injections, animals with estradiol implants and daily injections of saline and animals with empty implants and daily saline injections. Behavioural testing included tests to establish the level of levodopa-induced dyskinesias (LIDs), rotation tests (RT) and the forepaw adjusting step (FAS) test to assess the motor performance. Animal body weight was followed throughout the experiment and serum levels of estradiol were measured after euthanasia. Immunohistochemistry with anti-TH primary antibody was performed on frozen brain sections to establish the extent of the 6-OHDA lesion. We also evaluated the changes in expression of FosB protein in animals from different treatments.<br>
DOI: 10.6084/m9.figshare.19477598.v1
title: Kolmancic-Zivin-Zorovic_E2_L-dopa_data2022.sav

description: The data are the results of behavioural testing and immunohistochemistry from a study on the effects of estrogen on the development of levodopa-induced dyskinesias in a hemiparkinsonian postmenopausal rat model. The animal study protocol was approved by the Republic of Slovenia's Administration for Food Safety, Veterinary Sector and Plant Protection (ref. no. U34401-7/2017/9). The rats were overiectomized at the start of the experiment. Two weeks following the 6-OHDA lesion of dopaminergic neurons in the right hemisphere and implantation of either empty (control) or estradiol implants, the animals started recieiving daily injections of either levodopa or saline (control). Animals were divided into four tratment groups: animals with estradiol implants and daily levodopa injections, animals with empty implants and daily levodopa injections, animals with estradiol implants and daily injections of saline and animals with empty implants and daily saline injections. Behavioural testing included tests to establish the level of levodopa-induced dyskinesias (LIDs), rotation tests (RT) and the forepaw adjusting step (FAS) test to assess the motor performance. Animal body weight was followed throughout the experiment and serum levels of estradiol were measured after euthanasia. Immunohistochemistry with anti-TH primary antibody was performed on frozen brain sections to establish the extent of the 6-OHDA lesion. We also evaluated the changes in expression of FosB protein in animals from different treatments.<br>
DOI: 10.5517/ccdc.csd.cc2d4g89
title: CCDC 2208820: Experimental Crystal Structure Determination

description: Related Article: Qing An, Yang-Yang Xing, Ruihua Pu, Menghui Jia, Yuegang Chen, Anhua Hu, Shuo-Qing Zhang, Na Yu, Jianbo Du, Yanxia Zhang, Jinquan Chen, Weimin Liu, Xin Hong, Zhiwei Zuo|2022|J.Am.Chem.Soc.|145|359|doi:10.1021/jacs.2c10126
description: Related Article: Qing An, Yang-Yang Xing, Ruihua Pu, Menghui Jia, Yuegang Chen, Anhua Hu, Shuo-Qing Zhang, Na Yu, Jianbo Du, Yanxia Zhang, Jinquan Chen, Weimin Liu, Xin Hong, Zhiwei Zuo|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f4bwt
title: CCDC 2238506: Experimental Crystal Structure Determination

description: Related Article: Shulin Jiao, Zheng Tang, Dong Li, Cuiping Xu, Zhu Yang, Peng Chen, Xiaofan Sun, Hong-Ling Cai, Xiaoshan Wu|2023|Chem.Eng.Journal|466|143188|doi:10.1016/j.cej.2023.143188
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f4bxv
title: CCDC 2238507: Experimental Crystal Structure Determination

description: Related Article: Shulin Jiao, Zheng Tang, Dong Li, Cuiping Xu, Zhu Yang, Peng Chen, Xiaofan Sun, Hong-Ling Cai, Xiaoshan Wu|2023|Chem.Eng.Journal|466|143188|doi:10.1016/j.cej.2023.143188
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7985236
title: Long-term spatial memory, across large spatial scales, in Heliconius butterflies

description: Data accompanying "Long-term spatial memory, across large spatial scales, in <em>Heliconius </em>butterflies", <em>Current Biology </em>2023: exp1.csv. Behavioural data from experiment 1. exp2.csv. Behavioural data from experiment 2. exp3.csv. Behavioural data from experiment 3. Exp1&2.csv. Behavioural data comparing experiment 1 and 2. Exp1byDay.csv. Behavioural data for experiment 1 split by day. Exp2byDay.csv. Behavioural data for experiment 2 split by day. Exp3byDay.csv. Behavioural data for experiment 3 split by day. exp1.R. R code for experiment 1 analysis. exp2.R. R code for experiment 2 analysis. exp3.R. R code for experiment 3 analysis. exp1vsExp2.R. R code for comparing experiment 1 and 2.
DOI: 10.5281/zenodo.7985235
title: Long-term spatial memory, across large spatial scales, in Heliconius butterflies

description: Data accompanying "Long-term spatial memory, across large spatial scales, in <em>Heliconius </em>butterflies", <em>Current Biology </em>2023: exp1.csv. Behavioural data from experiment 1. exp2.csv. Behavioural data from experiment 2. exp3.csv. Behavioural data from experiment 3. Exp1&2.csv. Behavioural data comparing experiment 1 and 2. Exp1byDay.csv. Behavioural data for experiment 1 split by day. Exp2byDay.csv. Behavioural data for experiment 2 split by day. Exp3byDay.csv. Behavioural data for experiment 3 split by day. exp1.R. R code for experiment 1 analysis. exp2.R. R code for experiment 2 analysis. exp3.R. R code for experiment 3 analysis. exp1vsExp2.R. R code for comparing experiment 1 and 2.
DOI: 10.5281/zenodo.4487106
title: Koranic Science, Commentary [IO Islamic 896] سواطع الالهام

description: al-Qurʼān القرآن الكريم <strong>This manuscript is now IO Islamic 896 in the India Office collections.</strong> <strong>[metadata:</strong> <strong>Otto Loth, </strong><strong><em>A Catalogue of the Arabic Manuscripts in the Library of the India Office</em>, (volume 1), no. 104 here with further notations and hyperlinks]</strong>. 104. 896. Size 10<sup>1/4</sup> in. by 6<sup>1/4</sup> in.; foll. 530. Twenty-one lines in a page. A Commentary (ممزوج) on the Koran, entitled سواطع الالهام, by Abu’l-faiḍ b. Mubârak, commonly known by the poetical name of FAIḌÎ (born A. H. 954, at Agra, died A. H. 1004). Cf. Ḥ. Kh. iii. 629; Cat. Lugd. iv. 42; and Sprenger Cat. MSS Oudh, p. 127. A very curious composition, in which all letters with diacritical points are avoided. The author began it at the suggestion of his father Mubârak (d. A. H. 1001), and having been interrupted in is labours by a political mission in the service of Akbar,<sup>2</sup> completed it in A. H. 1002 at Lahore. The preface begins: الله لا اله الّا هو، لا اعلمه ما هو، و ما ادرکه کما هو، احامد المحامد، و محامد الاحامد، لله مصعدًا (مُصْعِدِ .r) لوامع العلم و ملهم سواطع الالهام It is followed by a succession of introductory remarks in two chapters. In the first, which is entitled: السواط الصالح (الصوالح r.) لصىر الكلام ، (الحوامل <sup>1</sup>) لاحوال محرّر سواطع الالهام The author gives an account of himself and his family, as well as of the origin and nature of his work. Those names and dates which contain letters with diacritical points are expressed by logogriphs. This chapter is concluded by a poem in praise of the present work. The second chapter (foll. 8-16) treats of general subjects, and is inscribed السواطع اللوامع لعلوم کلام الله العلام، و اسراره الصوالح لصدر المرام. An indifferent copy, written in two hands. It ends in the author’s epilogue, the last leaf being wanting. Coloured lines round each page. Foll. 193-206 are misplaced, and should stand thus: 201-6, 199, 200, 193-198. Seal of Khiradmand Khân, a servant of ‘Âlamgîr, A. H. 1115. <sup>1</sup> From the following MS. <sup>2</sup> Apparently his mission into the Dekhan. See Elphinstone’s India, p. 534.