cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17241352
title: Middle atmosphere temperature profiles by the CORAL lidar at Rio Grande, Southern Argentina

description: The dataset contains temperature profiles retrieved from lidar backscatter profiles assuming hydrostatic equilibrium. Vibrational Raman channel is used for altitudes below 31 km. The instrument used is the CORAL lidar at Rio Grande, Southern Argentina (latitude 53.8 deg S). A description of the instrument is here: https://amt.copernicus.org/articles/14/1715/2021/. The temperature profiles are 4-hour-averages centered around 4:31 UTC which is local solar midnight at Rio Grande (-67.8 longitude). The time frame is 2017-2024. The data was prepared for the publication "Decadal variability in mid-atmosphere temperature derived from continuous lidar observations" by Pedro Da Costa Louro et al., to be submitted to the Journal of Atmospheric and Solar-Terrestrial Physics in October 2025.

Natalie Kaifler

German Aerospace Center (DLR), Institute of Atmospheric Physics, Muenchener Strasse 20, 82234 Wessling, Germany
DOI: 10.5281/zenodo.17241353
title: Middle atmosphere temperature profiles by the CORAL lidar at Rio Grande, Southern Argentina

description: The dataset contains temperature profiles retrieved from lidar backscatter profiles assuming hydrostatic equilibrium. Vibrational Raman channel is used for altitudes below 31 km. The instrument used is the CORAL lidar at Rio Grande, Southern Argentina (latitude 53.8 deg S). A description of the instrument is here: https://amt.copernicus.org/articles/14/1715/2021/. The temperature profiles are 4-hour-averages centered around 4:31 UTC which is local solar midnight at Rio Grande (-67.8 longitude). The time frame is 2017-2024. The data was prepared for the publication "Decadal variability in mid-atmosphere temperature derived from continuous lidar observations" by Pedro Da Costa Louro et al., to be submitted to the Journal of Atmospheric and Solar-Terrestrial Physics in October 2025.

Natalie Kaifler

German Aerospace Center (DLR), Institute of Atmospheric Physics, Muenchener Strasse 20, 82234 Wessling, Germany
DOI: 10.15468/ffu3mr
title: GfI-Fischartenatlas

description: The "GfI-Fish Atlas," organised entirely on a voluntary basis, collates data on the distribution of marine and freshwater fish in Germany (including the Trilateral Wadden Sea Region of the Netherlands, Germany, and Denmark) as well as in Austria. All records are sourced from validated submissions contributed by registered users of the atlas platform.
DOI: 10.58060/pn40-e858
title: EVA project # 249 – 2025-04-06 ML approaches for developing a global terrestrial species distribution model - B. Karagol Ayan
title: SELECTION 2025-05-12

description: Final approved selection from European Vegetation Archive (EVA, incl. ReSurveyEurope) database for this EVA project specified with selection date. The EVA data are available on request using procedure described at How to obtain data (https://euroveg.org/eva-database/obtaining-data).
DOI: 10.5065/d6j67f8k
title: Tunable Diode Laser hygrometer, MayComm Instruments (TDL H2O). Version 1.0
DOI: 10.15468/dl.epfnd3
title: Occurrence Download

description: A dataset containing 48079 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aristolochia clematitis"
 ]
}

 The dataset includes 48079 records from 814 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035880-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8qbjsh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Russelia equisetiformis",
 "Country is Sao Tome and Principe",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035881-250920141307145/datasets/export for details.
DOI: 10.15468/dl.ycby8j
title: Occurrence Download

description: A dataset containing 20430 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Prunus africana, Croton macrostachyus, Maesopsis eminii, Markhamia lutea, Millettia dura, Pancovia golungensis, Albizia gummifera, Sapium ellipticum, Polyscias fulva, Syzygium guineense, Celtis africana, Coffea eugenioides)"
 ]
}

 The dataset includes 20430 records from 312 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035845-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5065/d6dj5cz5
title: START-08 Airborne Oxygen Instrument. Version 2.0

description: The NCAR Airborne Oxygen Instrument (AO2) was mounted on the NCAR GV during the START-08 project. The submitted AO2 data are in 1 flat ascii text file per flight. Each file contains running 10-second medians (of the original ~ 2.5-second data) at 1 Hz matching the times in the RAF data files. The files are in NASA Ames 1001 format, with a final comment line of variable names (UT CO2_AO2orig O2_AO2orig APO_AO2orig CO2_AO2 O2_AO2 APO_AO2), spaces separating columns, and 9999.99 for missing data. The reported times correspond to when the air entered the inlet. This instrument measures O2/N2 ratio as well as CO2 concentration.
DOI: 10.5281/zenodo.17202066
title: Data for PlaSIM-LSG AMOC index simulation in large ensemble using the TAMS algorithm

description: Data description

The dataset refers to four different experiments: simulations at constant 500 ppm and 600 ppm CO₂, and simulations following the SSP2-4.5 and SSP5-8.5 scenarios.

Each experiment is provided in two parts:





“intial” files: contain the 256-member ensemble of free simulations.




“final” files: contain the ensemble simulations after applying the TAMS algorithm.



File contents



 "log*.o" files contain all the information during the application of TAMS. In particular the probability estimates given in the last line of the file. Note that this values, for technical reasons, represent an overestimation by a factor (1-25/256). Please refer to the paper for final estimates.

"*.tar" files contain the information on AMOC index and scorefunction evolution during the simulation: Open those files with "tar -xf  *.tar". In each folder, a "ctrobs" directory contains files of the type "namefile.ctrlobs/score.mmmm.yyyy.txt". Those files contain a single value representing che AMOC-index/score of the mmmm trajectory at time yyyy.

"timesereis.py" contains the script necessary to produce timeseries in Fig 2 and Fig 3

"Response Tams.ipynb"  contains the script necessary to produce plots in Fig 1 and supplementary. Please note the data is derived from Cini et al, 2023

"TAMS_Matteo_scorefunction.py" contains the core of the TAMS algorithm, here specifically adapted to work in combination with PlaSIM-LSG simulations


Please note that "TAMS_amoc_final_ssp585" and "TAMS_amoc_final_ssp245" represent the TAMS simulation with rispectively 2100 and 2150 year as time limit, while their corresponding "intial" simulations extend further, providing the evolution of the AMOC up to the year 2200
DOI: 10.5281/zenodo.17194782
title: Data for PlaSIM-LSG AMOC index simulation in large ensemble using the TAMS algorithm

description: Data description

The dataset refers to four different experiments: simulations at constant 500 ppm and 600 ppm CO₂, and simulations following the SSP2-4.5 and SSP5-8.5 scenarios.

Each experiment is provided in two parts:





“intial” files: contain the 256-member ensemble of free simulations.




“final” files: contain the ensemble simulations after applying the TAMS algorithm.



File contents



 "log*.o" files contain all the information during the application of TAMS. In particular the probability estimates given in the last line of the file. Note that this values, for technical reasons, represent an overestimation by a factor (1-25/256). Please refer to the paper for final estimates.

"*.tar" files contain the information on AMOC index and scorefunction evolution during the simulation: Open those files with "tar -xf  *.tar". In each folder, a "ctrobs" directory contains files of the type "namefile.ctrlobs/score.mmmm.yyyy.txt". Those files contain a single value representing che AMOC-index/score of the mmmm trajectory at time yyyy.

"timesereis.py" contains the script necessary to produce timeseries in Fig 2 and Fig 3

"Response Tams.ipynb"  contains the script necessary to produce plots in Fig 1 and supplementary. Please note the data is derived from Cini et al, 2023

"TAMS_Matteo_scorefunction.py" contains the core of the TAMS algorithm, here specifically adapted to work in combination with PlaSIM-LSG simulations


Please note that "TAMS_amoc_final_ssp585" and "TAMS_amoc_final_ssp245" represent the TAMS simulation with rispectively 2100 and 2150 year as time limit, while their corresponding "intial" simulations extend further, providing the evolution of the AMOC up to the year 2200
DOI: 10.15468/dl.n793hj
title: Occurrence Download

description: A dataset containing 321083 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Bell Museum plants"
 ]
}

 The dataset includes 321083 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035843-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13225387
title: Health Workforce Shortage Areas
DOI: 10.58060/zfgn-w123
title: EVA project # 250 – 2025-04-10 Assessing the contribution of non-native species on ecosystem functioning of several vegetation types in Europe - K. Van Meerbeek, S. Haesen, M. Geuskens
title: SELECTION 2025-05-16

description: Final approved selection from European Vegetation Archive (EVA, incl. ReSurveyEurope) database for this EVA project specified with selection date. The EVA data are available on request using procedure described at How to obtain data (https://euroveg.org/eva-database/obtaining-data).
DOI: 10.5065/d68s4n89
title: AeroLaser Vacuum Ultra Violet (VUV) Fluorescence In Situ Carbon monoxide (CO) mixing ratio. Version 1.0

description: The AeroLaser Vacuum Ultra Violet (VUV) resonance fluorescence instrument measured carbon monoxide concentrations from the NSF/NCAR GV during the START08 project.
DOI: 10.5281/zenodo.17240858
title: Dataset for: Revealing pH-dependent antimicrobial peptide, GL13K, characteristics: A constant pH molecular dynamics study

description: These datasets contain



molecular dynamics trajectories and structural files for each system (10 systems * 5 replicas each) [XTC and PDB file]

Lambda trajectory for each system (10 systems * 5 replicas each * 4 lysines)

Sample Gromacs MDP files

ForceField

sample builder log file

Bash codes for some level of post-simulation analysis/file extraction

Analysis codes


The simulations were done in explicit water, but the water has been removed to make the files a reasonable size for upload.

The pre-registered plan describing this project is available on Open Science Foundation with the following DOI: https://doi.org/10.17605/OSF.IO/EW4VM

Acknowledgements:

This research was supported in part by Discovery Grant #RGPIN-2021-03470 from the National Sciences and Engineering Research Council of Canada. This research was enabled in part by support provided by Calcul Quebec (www.calculquebec.ca) and the Digital Research Alliance of Canada (https://alliancecan.ca). This research was undertaken, in part, thanks to funding from the Canada Research Chairs Program under grant number CRC-2020-00225.
DOI: 10.5065/d6513wjw
title: NSF/NCAR G-V Digital Camera Movie files. Version 1.0

description: During START08, the G-V flew a forward looking digital camera for in-flight video capture. Images were captured once per second during START08 flights. Images taken after dark have been stripped from this archive and the remaining images have been combined into movies, one mp4 file per flight.
DOI: 10.6084/m9.figshare.29959859
title: In search of certainty beyond the cholinergic system: a systematic review of developmental chlorpyrifos exposure and neurotransmitter systems disruption in preclinical models

description: Chlorpyrifos (CPF) is one of the most widely used pesticides globally, despite being strictly regulated and banned in several developed countries. It remains in use across many developing and underdeveloped nations. While its primary mechanism of action is acetylcholinesterase inhibition, multiple preclinical and clinical studies have reported developmental and cognitive alterations at lower doses that do not trigger this mechanism. These effects are particularly concerning during early development, when the central nervous system is immature and more vulnerable. Although various alternative molecular targets have been proposed, growing attention has been given to neurotransmitter systems beyond the cholinergic pathway. However, empirical data is inconsistent, and no qualitative or quantitative reviews have provided a clear understanding of these mechanisms. This systematic review aims to address this gap, focusing on preclinical rodent studies. Using a rigorous methodology, 41 studies were included in the qualitative analysis, covering 126 outcomes related to the dopaminergic, serotonergic, GABAergic, glutamatergic, and endocannabinoid systems. Overall, the included studies showed a low level of methodological quality and a high risk of bias. Only a few molecular targets were systematically investigated. We introduce two new evaluative metrics—Weight of Evidence and Percentage of Convergence—to highlight five key findings. Notably, preweaning CPF exposure consistently reduced the activity of endocannabinoid-degrading enzymes (FAAH and MAGL), resulting in elevated endocannabinoid tone, particularly increased levels of AEA. Additionally, there is consistent support for CPF-induced serotonergic alterations, particularly upregulation of 5HT2 and 5HT1A receptors following neonatal exposure. Due to insufficient data convergence across laboratories, a meta-analysis was deemed inappropriate. In conclusion, while numerous molecules have been linked to low-dose developmental CPF exposure, only a limited number show consistent empirical support, and only under postnatal exposure conditions. Future research should investigate prenatal exposure effects more systematically and replicate postnatal findings across independent laboratories to strengthen the reliability of these promising results through robust, quantitative analyses.
DOI: 10.6084/m9.figshare.29959859.v1
title: In search of certainty beyond the cholinergic system: a systematic review of developmental chlorpyrifos exposure and neurotransmitter systems disruption in preclinical models

description: Chlorpyrifos (CPF) is one of the most widely used pesticides globally, despite being strictly regulated and banned in several developed countries. It remains in use across many developing and underdeveloped nations. While its primary mechanism of action is acetylcholinesterase inhibition, multiple preclinical and clinical studies have reported developmental and cognitive alterations at lower doses that do not trigger this mechanism. These effects are particularly concerning during early development, when the central nervous system is immature and more vulnerable. Although various alternative molecular targets have been proposed, growing attention has been given to neurotransmitter systems beyond the cholinergic pathway. However, empirical data is inconsistent, and no qualitative or quantitative reviews have provided a clear understanding of these mechanisms. This systematic review aims to address this gap, focusing on preclinical rodent studies. Using a rigorous methodology, 41 studies were included in the qualitative analysis, covering 126 outcomes related to the dopaminergic, serotonergic, GABAergic, glutamatergic, and endocannabinoid systems. Overall, the included studies showed a low level of methodological quality and a high risk of bias. Only a few molecular targets were systematically investigated. We introduce two new evaluative metrics—Weight of Evidence and Percentage of Convergence—to highlight five key findings. Notably, preweaning CPF exposure consistently reduced the activity of endocannabinoid-degrading enzymes (FAAH and MAGL), resulting in elevated endocannabinoid tone, particularly increased levels of AEA. Additionally, there is consistent support for CPF-induced serotonergic alterations, particularly upregulation of 5HT2 and 5HT1A receptors following neonatal exposure. Due to insufficient data convergence across laboratories, a meta-analysis was deemed inappropriate. In conclusion, while numerous molecules have been linked to low-dose developmental CPF exposure, only a limited number show consistent empirical support, and only under postnatal exposure conditions. Future research should investigate prenatal exposure effects more systematically and replicate postnatal findings across independent laboratories to strengthen the reliability of these promising results through robust, quantitative analyses.
DOI: 10.15468/dl.vaf6cr
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Egypt",
 "Geometry POLYGON((29.28539 11.12483,46.79122 11.12483,46.79122 27.5711,29.28539 27.5711,29.28539 11.12483))",
 "HasGeospatialIssue is false",
 "TaxonKey is Sphyrna mokarran",
 "Year 1969-2025"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035882-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.58060/sjfn-ac22
title: EVA project # 251 – 2025-04-16 Distribution modeling of dry grasslands and its species - S. Karrenberg, H. Danko
title: SELECTION 2025-05-22

description: Final approved selection from European Vegetation Archive (EVA, incl. ReSurveyEurope) database for this EVA project specified with selection date. The EVA data are available on request using procedure described at How to obtain data (https://euroveg.org/eva-database/obtaining-data).
DOI: 10.25549/usctheses-ouc11399lrau
title: Instructional Alignment of Large Language Models: A Framework for Creating Personalized AI Teaching Assistants in Engineering Education
DOI: 10.5281/zenodo.17241440
title: The Sea Buckthorn Yogurt with Lactiplantibacillus plantarum YHG-87 Mitigates Symptoms of DSS-Induced Ulcerative Colitis Disease in Mice

description: The Sea Buckthorn Yogurt with Lactiplantibacillus plantarum YHG-87 Mitigates Symptoms of DSS-Induced Ulcerative Colitis in Mice. 16S rRNA Raw Data
DOI: 10.5281/zenodo.17241441
title: The Sea Buckthorn Yogurt with Lactiplantibacillus plantarum YHG-87 Mitigates Symptoms of DSS-Induced Ulcerative Colitis Disease in Mice

description: The Sea Buckthorn Yogurt with Lactiplantibacillus plantarum YHG-87 Mitigates Symptoms of DSS-Induced Ulcerative Colitis in Mice. 16S rRNA Raw Data
DOI: 10.15468/dl.cjmq9e
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acalypha lanceolata",
 "Country is Guyana",
 "HasCoordinate is true"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035884-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mb27jw
title: Occurrence Download

description: A dataset containing 141 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (Kenya, Tanzania, United Republic of, Malawi, Zimbabwe, Mozambique)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Dracaena fragrans, Impatiens walleriana, Chlorophytum comosum)"
 ]
}

 The dataset includes 141 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035885-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5065/d61834tj
title: Merged Selected GV Low Rate Flight-Level and Instrument Data and Interpolated GFS Analysis Variables. Version 1.0

description: This dataset contains netCDF data files that hold selected variables from the NCAR Gulfstream V (GV) aircraft, instrument observations, and large-scale meteorological variables interpolated in space and time from the high-resolution NCEP Global Forecast System (GFS) 6-hourly global analyses. Variables are given at 1-second time resolution for the duration of the flight. The files also include a number of derived variables, such as equivalent latitude, potential temperature lapse rate (stability), temperature at the tropopause, etc.
DOI: 10.15468/dl.2dqeg8
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acalypha lanceolata",
 "Country is Cook Islands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035883-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8x3z9d
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acalypha lanceolata",
 "Country is Kiribati",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035886-250920141307145/datasets/export for details.
DOI: 10.5065/d6wh2n9t
title: TIMREX: NCAR S-Pol radar experimental refractivity. Version 2.0

description: S-band Polarimetric (S-Pol) experimental refractivity product in NetCDF format from the Terrain-influenced Monsoon Rainfall Experiment (TiMREX). This data set is an experimental data set.
DOI: 10.58060/hbb2-7f40
title: EVA project # 252 – 2025-05-22 What factors drive orchid population change? - B.O. van Leeuwen
title: SELECTION 2025-06-23

description: Final approved selection from European Vegetation Archive (EVA, incl. ReSurveyEurope) database for this EVA project specified with selection date. The EVA data are available on request using procedure described at How to obtain data (https://euroveg.org/eva-database/obtaining-data).
DOI: 10.5065/d6rr1wjn
title: TIMREX: NCAR S-Pol radar uncorrected field data, MDV. Version 1.0

description: S-band Polarimetric (S-Pol) uncorrected field data, CIDD Meterological Data Volume (mdv) format, from the Terrain-influenced Monsoon Rainfall Experiment (TiMREX). There are dual sets of mdv files, one for VIRAQ and one for the HAWK spol processor. When ordering, be aware that the size of each file is listed and is about 4 GB.
DOI: 10.15468/dl.6a997r
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acalypha lanceolata",
 "Country is Samoa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035887-250920141307145/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.