cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21384786
title: An Empirical Comparison of Model-Agnostic Techniques for Defect Prediction Models

description: Recently, software defect prediction studies have attempted to make black-box defect prediction models explainable and actionable. State-of-the-art defect prediction studies have utilized various model-agnostic techniques derived from the explainable AI domain as key tools to make the predictions easier for practitioners to understand. However, it has not been sufficiently investigated whether there is an inconsistent information within local explanations generated by different model-agnostic techniques when interpreting a defect prediction. If local explanations generated by heterogeneous model-agnostic techniques consists of different information, the derivable insights to understand and act upon defect predictions becomes less viable and it may cause ineffective or even incorrect defect corrections. In this research, we empirically analyzed 323,844 local explanations generated by three different model-agnostic techniques: (1) LIME, (2) SHAP, and (3) BreakDown. These local explanations were analyzed in terms of how the contributions of features were distributed, how the contributions were ranked, and whether the contributions were contradictory. We concluded that (i) different model-agnostic techniques provide practitioners with local explanations where average contributions of the top-ranked features are different; (ii) different model-agnostic techniques provide practitioners with local explanations consisting of different contribution rankings and inconsistent contribution directions of top-ranked features. Therefore, we recommended that practitioners should avoid using model-agnostic techniques interchangeably and must perform a multi-faceted manual validation when planning actions based on the local explanations.
DOI: 10.6084/m9.figshare.21384786.v1
title: An Empirical Comparison of Model-Agnostic Techniques for Defect Prediction Models

description: Recently, software defect prediction studies have attempted to make black-box defect prediction models explainable and actionable. State-of-the-art defect prediction studies have utilized various model-agnostic techniques derived from the explainable AI domain as key tools to make the predictions easier for practitioners to understand. However, it has not been sufficiently investigated whether there is an inconsistent information within local explanations generated by different model-agnostic techniques when interpreting a defect prediction. If local explanations generated by heterogeneous model-agnostic techniques consists of different information, the derivable insights to understand and act upon defect predictions becomes less viable and it may cause ineffective or even incorrect defect corrections. In this research, we empirically analyzed 323,844 local explanations generated by three different model-agnostic techniques: (1) LIME, (2) SHAP, and (3) BreakDown. These local explanations were analyzed in terms of how the contributions of features were distributed, how the contributions were ranked, and whether the contributions were contradictory. We concluded that (i) different model-agnostic techniques provide practitioners with local explanations where average contributions of the top-ranked features are different; (ii) different model-agnostic techniques provide practitioners with local explanations consisting of different contribution rankings and inconsistent contribution directions of top-ranked features. Therefore, we recommended that practitioners should avoid using model-agnostic techniques interchangeably and must perform a multi-faceted manual validation when planning actions based on the local explanations.
DOI: 10.4121/a41f7e47-1ac0-4b2d-b4f8-f918a5cd1730
title: Data about the Effects of Human Rights on FDI: The Role of Audience Cost

description: This is a dataset to study the relationship between foreign direct investment and human rights.The study period of the sample used in the data set is from 2002 to 2012.The dependent variable is the amount of FDI inflow between the country of investment and the country of investment.
DOI: 10.4121/a41f7e47-1ac0-4b2d-b4f8-f918a5cd1730.v1
title: Data about the Effects of Human Rights on FDI: The Role of Audience Cost

description: This is a dataset to study the relationship between foreign direct investment and human rights.The study period of the sample used in the data set is from 2002 to 2012.The dependent variable is the amount of FDI inflow between the country of investment and the country of investment.
DOI: 10.25403/upresearchdata.22133984
title: Parameters of highveld and Mahali mole-rats caught over 18 months in northern Gauteng

description: This is dataset for highveld and Mahali mole-rat groups and individuals caught in semi-natural habitats; the National Pretoria Botanical Gardens, and communal lands, near Brits from 2019 to 2021. The dataset includes 40-year climate data, demographic, group size, group biomass data, body mass, life history, and molecular data from repeated measures. Besides individual density, the demographic data includes sex ratios. The life-history data include sex, age group, and reproductive status, whereas the molecular data include F<em>st</em> and genetic relatedness. Genetic data comes from microsatellites in the DNA obtained from small skin samples. Additionally group dynamics, the change of group size through emigration, immigration and births were estimated and included data on sex ratio and body mass of dispersers.
DOI: 10.25403/upresearchdata.22133984.v1
title: Parameters of highveld and Mahali mole-rats caught over 18 months in northern Gauteng

description: This is dataset for highveld and Mahali mole-rat groups and individuals caught in semi-natural habitats; the National Pretoria Botanical Gardens, and communal lands, near Brits from 2019 to 2021. The dataset includes 40-year climate data, demographic, group size, group biomass data, body mass, life history, and molecular data from repeated measures. Besides individual density, the demographic data includes sex ratios. The life-history data include sex, age group, and reproductive status, whereas the molecular data include F<em>st</em> and genetic relatedness. Genetic data comes from microsatellites in the DNA obtained from small skin samples. Additionally group dynamics, the change of group size through emigration, immigration and births were estimated and included data on sex ratio and body mass of dispersers.
DOI: 10.6084/m9.figshare.22339636
title: Supplementary Material for: Relationship between peripheral blood inflammatory factors and prognosis of subarachnoid hemorrhage: A meta-analysis

description: Background: Subarachnoid hemorrhage (SAH) is a severe cerebrovascular event with high mortality and disability rate. Neuroinflammation is involved in the brain injury after SAH, but the exact association between SAH progression and peripheral blood inflammatory factors is unknown. Therefore, to determine the relationship between inflammatory factors and the prognosis of SAH, we performed a meta-analysis. Method: A systematic literature review was conducted in PubMed, EMBASE, and Cochrane Library. Studies comparing the relationship between inflammatory factors (C-reactive protein (CRP), interleukin-6 (IL-6), interleukin-10 (IL-10), and tumor necrosis factor (TNF-α) and prognosis of SAH were included in the study. A random-effects meta-analysis was conducted based on mRS, GOS, and the occurrence of CVS, DCI, and DINDs. Sensitivity analysis was performed using the leave-one-out method. The New-castle–Ottawa Scale (NOS) for case-control studies was used to assess the quality of included studies. And for continuous variables, we calculated the mean difference (MD) with a 95% confidence interval (CI). Results: 1469 patients from 18 case-control studies met the inclusion criteria. The results found that patients in the good outcome group had significantly lower CRP levels than those in the poor outcome group (SMD: -1.15, 95% CI: -1.64– -0.66, p &lt; 0.00001, I2 = 87%), and peripheral IL-6 levels were significantly lower in SAH patients with the good functional outcome than those with the poor functional outcome (SMD: -0.99, 95% CI: -1.48– -0.51, p &lt; 0.0001, I2 = 88%). As for IL-10 (SMD: -0.28, 95% CI: -0.97– 0.42, p =0.43, I2 = 88%) and TNF-α (SMD: -0.40, 95% CI: -0.98– 0.19, p =0.18, I2 = 79%), due to the small number of studies, heterogeneity, and uncontrollable factors, robust conclusions cannot be drawn. Conclusion: SAH patients with good prognoses have significantly lower peripheral CRP and IL-6 levels. In addition, due to the small number of studies, heterogeneity, and uncontrollable factors, robust conclusions cannot be drawn for IL-10 and TNF-α. More high-quality studies are needed in the future to provide more specific recommendations for the clinical practice of inflammatory factors.
DOI: 10.5281/zenodo.7768596
title: Dataset for "Development of an ultra-thin parallel plate ionization chamber for dosimetry in FLASH radiotherapy"

description: Dataset for paper: Gómez F, Gonzalez-Castaño DM, Fernández NG,Pardo-Montero J, Schüller A, Gasparini A,Vanreusel V, Verellen D, Felici G, Kranzer R, Paz-Martín J. Development of an ultra-thin parallel plate ionization chamber for dosimetry in FLASH radiotherapy. Med Phys.2022;49:4705–4714. https://doi.org/10.1002/mp.15668
description: This project 18HLT04 UHDpulse has received funding from the EMPIR programme co-financed by the Participating States and from the European Union's Horizon 2020 research and innovation programme.
DOI: 10.5281/zenodo.7768597
title: Dataset for "Development of an ultra-thin parallel plate ionization chamber for dosimetry in FLASH radiotherapy"

description: Dataset for paper: Gómez F, Gonzalez-Castaño DM, Fernández NG,Pardo-Montero J, Schüller A, Gasparini A,Vanreusel V, Verellen D, Felici G, Kranzer R, Paz-Martín J. Development of an ultra-thin parallel plate ionization chamber for dosimetry in FLASH radiotherapy. Med Phys.2022;49:4705–4714. https://doi.org/10.1002/mp.15668
description: This project 18HLT04 UHDpulse has received funding from the EMPIR programme co-financed by the Participating States and from the European Union's Horizon 2020 research and innovation programme.
DOI: 10.5281/zenodo.7773455
title: PubMedQA

description: PubMedQA Dataset processed by LMFlow team.
DOI: 10.5281/zenodo.7773454
title: PubMedQA

description: PubMedQA Dataset processed by LMFlow team.
DOI: 10.48420/21931770.v3
title: TPI UK ITL1 Scorecards

description: This dataset includes scorecards for all 12 ITL1 regions in the United Kingdom. These scorecards indicate for each ITL1 region how well the region is peforming as compared to the median of all ITL1 regions in the UK, for a broad set of indicators. These indicators are considered to be drivers of productivity and are classified according to five broad categories: Business performance & characteristics; Skills & training; Policy & institutions; Health & wellbeing; Investment, infrastructure & connectivity. The sources and methodology of the indicators, and their use in the scorecards is included, as well as a brief overview of this project.
DOI: 10.5281/zenodo.7404491
title: ELWar Expert Survey Trend File

description: This repository contains the combined data from the 2018, 2020, and 2022 ELWar expert surveys on parties’ political ideology, policy positions, and behavior in six countries in South-East Europe: Bosnia and Herzegovina, Croatia, Kosovo, North Macedonia, Montenegro, and Serbia. The survey is part of the project “Electoral Legacies of War: Political Competition in Postwar Southeast Europe" (ELWar).
DOI: 10.5281/zenodo.7404492
title: ELWar Expert Survey Trend File

description: This repository contains the combined data from the 2018 and 2020 ELWar expert surveys on parties’ political ideology, policy positions, and behavior in six countries in South-East Europe: Bosnia and Herzegovina, Croatia, Kosovo, North Macedonia, Montenegro, and Serbia. The survey is part of the project “Electoral Legacies of War: Political Competition in Postwar Southeast Europe" (ELWar).
DOI: 10.5281/zenodo.7404568
title: ELWar Expert Survey Trend File

description: This repository contains the combined data from the 2018, 2020, and 2022 ELWar expert surveys on parties’ political ideology, policy positions, and behavior in six countries in South-East Europe: Bosnia and Herzegovina, Croatia, Kosovo, North Macedonia, Montenegro, and Serbia. The survey is part of the project “Electoral Legacies of War: Political Competition in Postwar Southeast Europe" (ELWar).
DOI: 10.5281/zenodo.7260735
title: DisVis-based filtering of contacts from co-evolution data (or other sources)

description: Dataset described in the manuscript: <em>Improving the Quality of Co-evolution Intermolecular Contact Prediction with DisVis</em>Siri Camee van Keulen, Alexandre M.J.J. Bonvin Details about the data set can be found at: https://github.com/haddocking/contact-filtering This archive contains in addition all the models generated with HADDOCK.
description: Funding: Dutch Foundation for Scientific Research (NWO) (PPS Technology Area grant 741.018.201)
description: {"references": ["mproving the Quality of Co-evolution Intermolecular Contact Prediction with DisVisSiri Camee van Keulen, Alexandre M.J.J. Bonvin"]}
DOI: 10.5281/zenodo.7260736
title: DisVis-based filtering of contacts from co-evolution data (or other sources)

description: Dataset described in the manuscript: <em>Improving the Quality of Co-evolution Intermolecular Contact Prediction with DisVis</em>Siri Camee van Keulen, Alexandre M.J.J. Bonvin Details about the data set can be found at: https://github.com/haddocking/contact-filtering This archive contains in addition all the models generated with HADDOCK.
description: Funding: Dutch Foundation for Scientific Research (NWO) (PPS Technology Area grant 741.018.201)
description: {"references": ["mproving the Quality of Co-evolution Intermolecular Contact Prediction with DisVisSiri Camee van Keulen, Alexandre M.J.J. Bonvin"]}
DOI: 10.5281/zenodo.7773498
title: DisVis-based filtering of contacts from co-evolution data (or other sources)

description: Dataset described in the manuscript: <em>Improving the Quality of Co-evolution Intermolecular Contact Prediction with DisVis</em>Siri Camee van Keulen, Alexandre M.J.J. Bonvin Details about the data set can be found at: https://github.com/haddocking/contact-filtering This archive contains in addition all the models generated with HADDOCK.
description: Funding: Dutch Foundation for Scientific Research (NWO) (PPS Technology Area grant 741.018.201)
description: {"references": ["mproving the Quality of Co-evolution Intermolecular Contact Prediction with DisVisSiri Camee van Keulen, Alexandre M.J.J. Bonvin"]}
DOI: 10.5281/zenodo.6532009
title: Test Result for IIA Zone protection method.

description: Test results related to the paper: "Application of IIA Method and Virtual Bus Theory for Backup Protection of a Zone Using PMU Data in a WAMPAC System", Energies Magazine, 2022. Link Energies: https://www.mdpi.com/1996-1073/15/9/3470 DOI: https://doi.org/10.3390/en15093470 Authors of paper: Aníbal Antonio Prada Hurtado, Eduardo Martinez Carrasco, Maria Teresa Villén Martínez and Jose Saldaña.
DOI: 10.5281/zenodo.6532010
title: Test Result for IIA Zone protection method.

description: Test results related to the paper: "Application of IIA Method and Virtual Bus Theory for Backup Protection of a Zone Using PMU Data in a WAMPAC System", Energies Magazine, 2022. Link Energies: https://www.mdpi.com/1996-1073/15/9/3470 DOI: https://doi.org/10.3390/en15093470 Authors of paper: Aníbal Antonio Prada Hurtado, Eduardo Martinez Carrasco, Maria Teresa Villén Martínez and Jose Saldaña.
DOI: 10.5281/zenodo.7773526
title: Test closed access upload (single blind)

description: Test
DOI: 10.5281/zenodo.7773525
title: Test closed access upload (single blind)

description: Test
DOI: 10.5281/zenodo.7773542
title: LISST-HOLO_rawimages_20210914

description: LISST-HOLO raw images (.tiff) and associated post-processed files (.cvs and .mat) collected along the Rhône River interflow in Lake Geneva on 14/09/2021.
DOI: 10.5281/zenodo.7773541
title: LISST-HOLO_rawimages_20210914

description: LISST-HOLO raw images (.tiff) and associated post-processed files (.cvs and .mat) collected along the Rhône River interflow in Lake Geneva on 14/09/2021.
DOI: 10.5519/qd.br4uq1gk
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (13692 records)
DOI: 10.6084/m9.figshare.19573490
title: Diachronous initiation of Arabia–Eurasia collision from eastern Anatolia to the southeastern Zagros Mountains since middle Eocene time

description: The persistent debate over the timing of initial Arabia–Eurasia collision has eluded consensus for decades, with most estimates ranging widely from ~50 to 10 Ma along both the Anatolian and Zagros segments of the orogen. Here, we independently evaluate the timing and location of initial collision using a quantitative plate tectonic reconstruction that is the first to include the entire Arabian microcontinent and regions to the north in eastern Anatolia, northwestern Iran, and the Caucasus. The reconstruction combines new kinematic constraints from recent global plate models with a synthesis of available constraints on crustal shortening and continental and back-arc subduction to restore the pre-collisional geometries of the Arabian and Eurasian continental margins and to track their interaction through time. Our preferred model suggests that initial continental underthrusting, or soft collision, of the relatively thin Arabian passive margin with Eurasia occurred by ca. 42 Ma along the eastern Bitlis suture zone and began transmitting strain across central and eastern Anatolia, the Caucasus, and northwestern Iran. Collision inception then propagated westward into central Anatolia and southeastward into the northwestern Zagros Mountains by late Eocene time (ca. 40–35 Ma), the central Zagros by latest Eocene to early Oligocene time, (ca. 35–25 Ma), and finally the southeastern Zagros by latest Oligocene to middle Miocene time (ca. 25–15 Ma). The diachroneity of Arabia collision led to widespread upper-plate (Eurasian) contraction and a similarly time-transgressive magmatic lull that lagged behind the onset of collision by ~2–12 Myr. By incorporating the entire Arabian microcontinent and regions to the north, this new tectonic reconstruction highlights the diachronous nature of Arabia–Eurasia collision that occurred first along the Bitlis suture zone in eastern Anatolia during late middle Eocene time and became progressively younger to the southeast along strike of the Zagros suture zone.
DOI: 10.6084/m9.figshare.19573490.v2
title: Diachronous initiation of Arabia–Eurasia collision from eastern Anatolia to the southeastern Zagros Mountains since middle Eocene time

description: The persistent debate over the timing of initial Arabia–Eurasia collision has eluded consensus for decades, with most estimates ranging widely from ~50 to 10 Ma along both the Anatolian and Zagros segments of the orogen. Here, we independently evaluate the timing and location of initial collision using a quantitative plate tectonic reconstruction that is the first to include the entire Arabian microcontinent and regions to the north in eastern Anatolia, northwestern Iran, and the Caucasus. The reconstruction combines new kinematic constraints from recent global plate models with a synthesis of available constraints on crustal shortening and continental and back-arc subduction to restore the pre-collisional geometries of the Arabian and Eurasian continental margins and to track their interaction through time. Our preferred model suggests that initial continental underthrusting, or soft collision, of the relatively thin Arabian passive margin with Eurasia occurred by ca. 42 Ma along the eastern Bitlis suture zone and began transmitting strain across central and eastern Anatolia, the Caucasus, and northwestern Iran. Collision inception then propagated westward into central Anatolia and southeastward into the northwestern Zagros Mountains by late Eocene time (ca. 40–35 Ma), the central Zagros by latest Eocene to early Oligocene time, (ca. 35–25 Ma), and finally the southeastern Zagros by latest Oligocene to middle Miocene time (ca. 25–15 Ma). The diachroneity of Arabia collision led to widespread upper-plate (Eurasian) contraction and a similarly time-transgressive magmatic lull that lagged behind the onset of collision by ~2–12 Myr. By incorporating the entire Arabian microcontinent and regions to the north, this new tectonic reconstruction highlights the diachronous nature of Arabia–Eurasia collision that occurred first along the Bitlis suture zone in eastern Anatolia during late middle Eocene time and became progressively younger to the southeast along strike of the Zagros suture zone.
DOI: 10.6084/m9.figshare.16799744
title: First evidence for the subduction initiation and boninitic magmatism from the Armutlu Peninsula (NW Turkey): geodynamic significance for the Cadomian magmatic arc system of the Gondwanan margin

description: The Cadomian Orogeny was active along the northern margin of Gondwanaland during the Late Neoproterozoic–Early Cambrian period. Remains of this orogenic activity are traced from Western Europe to the Himalayas, including some metamorphic basement rocks of Turkey. In this study, we provide new whole-rock and mineral chemistry, and zircon U–Pb age data for the metagabbro and metagranites in the Armutlu Peninsula, north of the Intra Pontide suture zone (IPSZ), which are the equivalent of the Cadomian basement of the İstanbul Zone (İZ). Geochemically, the metagabbros show an extreme depletion in Nb, Zr, Th, and Hf; low TiO<sub>2</sub> contents; and high Mg# values exhibiting boninitic affinity, which are commonly associated with fore-arc settings. The metagranites are calc-alkaline and high-K calc-alkaline in character. They are slightly enriched in LREE and have similar features to shear-type plagiogranites. The yielded zircon U-Pb crystallization ages are 564 ± 4.4 Ma for metagabbros and 561 ± 9.5 Ma (Late Ediacaran) for metagranites. In this study, we provide additional information for the Cadomian basement of the İZ and the geodynamic evolution of Cadomian magmatism by discussing the tectonic setting for two geochemically contrast but almost coeval magmatic products.
DOI: 10.6084/m9.figshare.16799744.v2
title: First evidence for the subduction initiation and boninitic magmatism from the Armutlu Peninsula (NW Turkey): geodynamic significance for the Cadomian magmatic arc system of the Gondwanan margin

description: The Cadomian Orogeny was active along the northern margin of Gondwanaland during the Late Neoproterozoic–Early Cambrian period. Remains of this orogenic activity are traced from Western Europe to the Himalayas, including some metamorphic basement rocks of Turkey. In this study, we provide new whole-rock and mineral chemistry, and zircon U–Pb age data for the metagabbro and metagranites in the Armutlu Peninsula, north of the Intra Pontide suture zone (IPSZ), which are the equivalent of the Cadomian basement of the İstanbul Zone (İZ). Geochemically, the metagabbros show an extreme depletion in Nb, Zr, Th, and Hf; low TiO<sub>2</sub> contents; and high Mg# values exhibiting boninitic affinity, which are commonly associated with fore-arc settings. The metagranites are calc-alkaline and high-K calc-alkaline in character. They are slightly enriched in LREE and have similar features to shear-type plagiogranites. The yielded zircon U-Pb crystallization ages are 564 ± 4.4 Ma for metagabbros and 561 ± 9.5 Ma (Late Ediacaran) for metagranites. In this study, we provide additional information for the Cadomian basement of the İZ and the geodynamic evolution of Cadomian magmatism by discussing the tectonic setting for two geochemically contrast but almost coeval magmatic products.