cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57745/mqvydj
title: MilkOligoThesaurus_HoloOLIGO_dec2023.txt

description: Milk oligosaccharide thesaurus in txt format. This table linked milk oligosaccharide names to abbreviations, current synonyms, monosaccharide compositions and linkage according to IUPAC nomenclature, ChEBI and PubChem ID, isomer groups. This thesaurus was built from manual analysis of 11 selected research and review articles and ChEBI and pubChem databases
DOI: 10.57745/yfyxxz
title: convert_to_Skos_MilkOligosaccharide_thesaurus_HoloOLIGO_sept2023.xlsx

description: This xlsx file correspond to the input file for SKOSplay! convert function
DOI: 10.57745/dimef0
title: MilkOligoThesaurus_HoloOLIGO_dec2023.rdf

description: Milk Oligosaccharide thesaurus converted to rdf SKOS format;
DOI: 10.57745/jx9kmo
title: MilkOligoThesaurus_HoloOLIGO_dec2023.ttl

description: Milk Oligosaccharide thesaurus converted to turtle (ttl) SKOS format
DOI: 10.57745/p7eeib
title: convert_to_Skos_MilkOligoThesaurus_HoloOLIGO_feb2024.xlsx

description: This xlsx file correspond to the input file for SKOSplay! convert function
DOI: 10.57745/qbfxbl
title: MilkOligoThesaurus_HoloOLIGO_dec2023.rdf

description: Milk Oligosaccharide thesaurus converted to rdf SKOS format;
DOI: 10.57745/txqttw
title: MilkOligoThesaurus_HoloOLIGO_dec2023.rdf

description: Milk Oligosaccharide thesaurus converted to rdf SKOS format;
DOI: 10.57745/u6fnw8
title: MilkOligoThesaurus_HoloOLIGO_dec2023.ttl

description: Milk Oligosaccharide thesaurus converted to turtle (ttl) SKOS format
DOI: 10.57745/aelmdh
title: MilkOligoThesaurus_HoloOLIGO_fev2024.rdf

description: Milk Oligosaccharide thesaurus converted to rdf SKOS format;
DOI: 10.57745/odt7ni
title: MilkOligoThesaurus_HoloOLIGO_feb2024.ttl

description: Milk Oligosaccharide thesaurus converted to turtle (ttl) SKOS format
DOI: 10.57745/tj6euo
title: MilkOligoThesaurus_HoloOLIGO_feb2024.xlsx

description: This table linked milk oligosaccharide names to abbreviations, current synonyms, monosaccharide compositions and linkage according to IUPAC nomenclature, ChEBI and PubChem ID, isomer groups. This thesaurus was built from manual analysis of 11 selected research and review articles and ChEBI and pubChem databases
DOI: 10.57745/y7uhos
title: MilkOligoThesaurus_HoloOLIGO_feb2024.txt

description: Milk oligosaccharide thesaurus in txt format. This table linked milk oligosaccharide names to abbreviations, current synonyms, monosaccharide compositions and linkage according to IUPAC nomenclature, ChEBI and PubChem ID, isomer groups. This thesaurus was built from manual analysis of 11 selected research and review articles and ChEBI and pubChem databases
DOI: 10.6084/m9.figshare.17696242
title: Additional file 2 of Down-regulation of OsMYB103L distinctively alters beta-1,4-glucan polymerization and cellulose microfibers assembly for enhanced biomass enzymatic saccharification in rice

description: Additional file 2: Table S1. Primers used in this study.
DOI: 10.6084/m9.figshare.25266589.v1
title: Intracellular Zn2+ Promotes Extracellular Matrix Remodeling in Dexamethasone-Treated Trabecular Meshwork

description: Given the widespread application of glucocorticoids in ophthalmology, the associated elevation of intraocular pressure (IOP) has long been a vexing concern for clinicians, yet the underlying mechanisms remain inconclusive. Much of the discussion focuses on the extracellular matrix (ECM) of trabecular meshwork (TM). It's widely agreed that glucocorticoids impact the expression of matrix metalloproteinases (MMPs), leading to ECM deposition. Since Zn2+ is vital for MMPs, we explored its role in ECM alterations induced by dexamethasone (DEX). Our study revealed that in human TM cells treated with DEX, the level of intracellular Zn2+ significantly decreased and accompanied by impaired extracellular Zn2+ uptake. This correlated with changes in several Zrt-, Irt-related proteins (ZIP) and metallothionein. ZIP8 knockdown impaired extracellular Zn2+ uptake, but Zn2+ chelation didn't affect ZIP8 expression. Resembling DEX's effects, chelating Zn2+ decreased MMP2 expression, increased the deposition of ECM proteins, and induced structural disarray of ECM. Conversely, supplementation of exogenous Zn2+ to DEX-treated cells ameliorated these outcomes. Inspiringly, dietary zinc supplementation in mice significantly reduced DEX-induced IOP elevation and collagen content in TM, thereby rescuing the visual function of the mice. These findings underscore zinc's pivotal role in ECM regulation, providing a novel perspective on the pathogenesis of glaucoma.
DOI: 10.6084/m9.figshare.17696242.v1
title: Additional file 2 of Down-regulation of OsMYB103L distinctively alters beta-1,4-glucan polymerization and cellulose microfibers assembly for enhanced biomass enzymatic saccharification in rice

description: Additional file 2: Table S1. Primers used in this study.
DOI: 10.6084/m9.figshare.19793394
title: Additional file 4 of Transcriptome and metabolome reveal the accumulation of secondary metabolites in different varieties of Cinnamomum longepaniculatum

description: Additional files 4: Table S2. The DEGs functional classification.
DOI: 10.15468/dl.mx7znk
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen)",
 "Geometry POLYGON((-98.5 18.83,-97.33 18.83,-97.33 20.67,-98.5 20.67,-98.5 18.83))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ternstroemia huasteca B.M.Barthol."
 ]
}

 The dataset includes 21 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0198472-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.voz9mr
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Faramea stenantha Müll.Arg."
 ]
}

 The dataset includes 29 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000509-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.1j3gas
title: Occurrence Download

description: A dataset containing 9664 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leucojum vernum L."
 ]
}

 The dataset includes 9664 records from 148 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004468-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bc9qpd
title: Occurrence Download

description: A dataset containing 4431 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "RecordedBy is one of (TIMOTHY PLOWMAN, T. PLOWMAN)"
 ]
}

 The dataset includes 4431 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020834-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gpxsyz
title: Occurrence Download

description: A dataset containing 968 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mononychellus tanajoa (Bondar, 1938)"
 ]
}

 The dataset includes 968 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018101-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10550468
title: Multiresolution molecular dynamics simulations reveal the interplay between conformational variability and functional interactions in membrane-bound cytochrome 2B4

description: This dataset contains coordinate files, scripts and input parameters to run and analyse molecular dynamics simulations of membrane bound CYP 2B4.

 

The associated study is described in: 

data - containes input data & last simulation frames for all of the described MD simulations and analyses described in the manuscript

Structures_used_for_figures - contains .pdb and .pse files of all protein structures depicted in the manuscript
DOI: 10.5281/zenodo.10550469
title: Multiresolution molecular dynamics simulations reveal the interplay between conformational variability and functional interactions in membrane-bound cytochrome 2B4

description: This dataset contains coordinate files, scripts and input parameters to run and analyse molecular dynamics simulations of membrane bound CYP 2B4.

 

The associated study is described in: 

data - containes input data & last simulation frames for all of the described MD simulations and analyses described in the manuscript

Structures_used_for_figures - contains .pdb and .pse files of all protein structures depicted in the manuscript
DOI: 10.15468/dl.ll5qhr
title: Occurrence Download

description: A dataset containing 6585 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Angiopteris Hoffm."
 ]
}

 The dataset includes 6585 records from 98 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004468-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ahn53q
title: Occurrence Download

description: A dataset containing 5338885 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Natural History Museum (London) Collection Specimens"
 ]
}

 The dataset includes 5338885 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020821-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a5v62u
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anolis cristifer Smith, 1968"
 ]
}

 The dataset includes 59 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013663-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rvl9hd
title: Occurrence Download

description: A dataset containing 183 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Schinopsis lorentzii var. lorentzii",
 "TaxonKey is Schinopsis quebrachocolorado (Schltdl.) F.A.Barkley & T.Mey.",
 "TaxonKey is Schinopsis quebracho-colorado (Schltdl.) F. A. Barkley & T. Mey.",
 "TaxonKey is Schinopsis lorentzii (Griseb.) Engl."
 ]
 },
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 183 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004469-150615163101818/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10985916
title: Antigen Delivery Controlled by an On-Demand Photorelease

description: To eliminate infected and cancerous cells, antigen processing and presentation play a pivotal role through the recognition of antigenic peptides displayed on Major Histocompatibility Complex class I (MHC I) molecules. Here, we developed a photostimulated antigen release system that enables the temporal inception of antigen flux. Simple and effective photocaging of the human immunodeficiency virus (HIV)-Nef73-derived epitope, a representative high-affinity MHC I ligand, was provided by steric hindrance to block the recognition by the transporter associated with antigen processing (TAP) in the peptide loading complex (PLC). In response to light, a heteronomous release of antigens and subsequent translocation in various scenarios is demonstrated, including a TAP-related ATP-binding cassette (ABC) transporter reconstituted in liposomes and the native PLC in the endoplasmic reticulum (ER) membrane of human cells. The photochemically induced ‘burst’ of antigens opens new prospects for a mechanistic analysis of the antigen translocation machinery and will help to provide insights into antigen processing pathways via an on-demand, subcellular pulse-chase release of antigens.
DOI: 10.15468/dl.7vsbku
title: Occurrence Download

description: A dataset containing 4717908 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "CoordinateUncertaintyInMeters 0.0-5729.0"
 ]
}

 The dataset includes 4717908 records from 1066 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031821-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10993554
title: BIR-MicroED: selected area electron diffraction datasets from slowly rotating (0.09 degrees/second) microcrystals (biotin, Zn(II)-methionine, and Co(II)-porphyrin) at 200 keV

description: This deposition contains a series zip files each containing electron diffraction datasets in .mrc file format. Each folder collects data acquired from crystals of a particular compound under the same conditions (electron energy, temperature). Zip files are named according to the format: "CompoundName_slowrotation_0pp09dps_tiltseries_Temperature.zip"

Diffraction datasets within each folder are named according to the format: "CompoundName_slowrotation_0p09dps_tiltseries_AcceleratingVoltage_Temperature_series#.mrc"
DOI: 10.15468/dl.wl1rqg
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Costa Rica",
 "Year 2014-2019",
 "TaxonKey is Ibycter americanus (Boddaert, 1783)"
 ]
}

 The dataset includes 43 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007747-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/ovayhc
title: PELD-ELPA Ecology of the pink-shrimp Penaeus paulensis in Patos Lagoon estuary

description: Juveniles of pink-shrimp Penaeus paulensis are monthly sampled since 1996 at six stations in the Patos Lagoon estuary and two sites in the marine area surrounding the estuarine mouth. The catch per unit effort (CPUE) is estimated in weight and numbers. This data series provides unique long-term information enabling the evaluation of natural and anthropic impacts in the estuarine and coastal region in southern Brazil, especially for an intensively exploited fishery resource, such as the pink-shrimp.
DOI: 10.5281/zenodo.10993553
title: BIR-MicroED: selected area electron diffraction datasets from slowly rotating (0.09 degrees/second) microcrystals (biotin, Zn(II)-methionine, and Co(II)-porphyrin) at 200 keV

description: This deposition contains a series zip files each containing electron diffraction datasets in .mrc file format. Each folder collects data acquired from crystals of a particular compound under the same conditions (electron energy, temperature). Zip files are named according to the format: "CompoundName_slowrotation_0pp09dps_tiltseries_Temperature.zip"

Diffraction datasets within each folder are named according to the format: "CompoundName_slowrotation_0p09dps_tiltseries_AcceleratingVoltage_Temperature_series#.mrc"
DOI: 10.15468/dl.tljcbx
title: Occurrence Download

description: A dataset containing 6083 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Biological Records Centre - Sepsidae (Diptera) records from Britain and Ireland to 1985"
 ]
}

 The dataset includes 6083 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004469-150811131857512/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.95fs27
title: Occurrence Download

description: A dataset containing 7980 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Hemiphractidae"
 ]
}

 The dataset includes 7980 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020832-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.i3jjp2
title: Occurrence Download

description: A dataset containing 10248 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "License is CC-BY 4.0",
 "License is CC-BY-NC 4.0"
 ]
 },
 "TaxonKey is Amblyomma Koch, 1844"
 ]
}

 The dataset includes 10248 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009526-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ber8ru
title: Occurrence Download

description: A dataset containing 348 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Prunus occidentalis Sw."
 ]
}

 The dataset includes 348 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004469-160311141623029/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10993044
title: DATASET PARA ANÁLISE UNIVARIADA DE OCR

description: Repositório de dados contendo 52.525 imagens sintéticas para avaliação univariada de sistemas de Reconhecimento Óptico de Caracteres e estudos sobre detecção de fake news.
DOI: 10.15468/dl.fmccgu
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (Spain, Portugal)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Erinaceus europaeus Linnaeus, 1758",
 "Year 1000-1770"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031818-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gqanvp
title: Occurrence Download

description: A dataset containing 26125 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Elatostema J.R.Forst. & G.Forst."
 ]
}

 The dataset includes 26125 records from 209 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018065-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dvy7pc
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Diclidurus ingens Hernández-Camacho, 1955",
 "Country is Colombia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085573-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pk96eu
title: Occurrence Download

description: A dataset containing 109 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinguicula macrophylla Kunth"
 ]
}

 The dataset includes 109 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085578-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7s8l1e
title: Occurrence Download

description: A dataset containing 252 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Herpailurus yagouaroundi (É.Geoffroy Saint-Hilaire, 1803)"
 ]
}

 The dataset includes 252 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085579-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.amzeq1
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Centronycteris centralis Thomas, 1912",
 "Country is Colombia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085580-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eipiz4
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Giraffa camelopardalis (Linnaeus, 1758)",
 "Country is Botswana",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 30 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085581-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jrcyir
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cormura brevirostris (Wagner, 1843)",
 "Country is Colombia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 46 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085583-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.euicxp
title: Occurrence Download

description: A dataset containing 21420 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tamiasciurus hudsonicus (Erxleben, 1777)",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 21420 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085585-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gkfusa
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Saccopteryx canescens Thomas, 1901",
 "Country is Colombia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 19 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085591-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vyhsrv
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tamiasciurus mearnsi (Townsend, 1897)",
 "BasisOfRecord is Specimen"
 ]
}

 The dataset includes 21 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085593-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.