cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.22140140.v1
title: Bacterial lipoproteins shift cellular metabolism to glycolysis in macrophages causing bone erosion

description: Belonging to a group of membrane proteins, bacterial lipoproteins (LPP) are defined by a unique lipid structure at their <em>N</em>-terminus providing the anchor in the bacterial cell membrane. In Gram-positive bacteria, LPP play a key role in host immune activation triggered through a Toll-like receptor 2 (TLR2)-mediated action resulting in macrophage stimulation and subsequent tissue damage demonstrated in <em>in vivo</em> experimental models. Yet, the physiologic links between LPP activation, cytokine release, and any underlying switches in cellular metabolism remain unclear. In this study, we demonstrated that <em>S. aureus</em> Lpl1 not only triggers cytokine production but also confers a shift towards fermentative metabolism in bone marrow derived macrophages (BMDM). Lpl1 consists of di- and tri-acylated LPP variants, hence, the synthetic P2C and P3C, mimicking di-and tri-acylated LPP, were performed to reveal their effect on BMDM. When compared to P3C, P2C was found to shift the metabolism of BMDM and the human mature monocytic MonoMac 6 (MM6) cells more profoundly towards the fermentative pathway as indicated by lactate accumulation, glucose consumption, pH reduction, and oxygen consumption. <em>In vivo</em>, P2C caused more severe joint inflammation, bone erosion and lactate and malate accumulation when compared to P3C. These observed P2C effects were completely abrogated in monocyte/macrophage depleted mice. Taken together, these findings now solidly confirm the hypothesized link between LPP exposure, a macrophage metabolic shift towards fermentation, and ensuing bone destruction.
DOI: 10.5517/ccdc.csd.cc23s79g
title: CCDC 1959705: Experimental Crystal Structure Determination

description: Related Article: Tsubasa Tanaka, Yukinari Sunatsuki, Takayoshi Suzuki|2020|Inorg.Chim.Acta|502|119373|doi:10.1016/j.ica.2019.119373
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.7914439
title: FIRST ABSOLUTE GRAVITY MEASUREMENTS IN HAITI DURING NOVEMBER 2016

description: This report contains the preliminary results of absolute gravity measurements carried out in Haiti in November 2016 at three locations: Port-au-Prince, Jacmel and Fond des Blancs
DOI: 10.5281/zenodo.7914438
title: FIRST ABSOLUTE GRAVITY MEASUREMENTS IN HAITI DURING NOVEMBER 2016

description: This report contains the preliminary results of absolute gravity measurements carried out in Haiti in November 2016 at three locations: Port-au-Prince, Jacmel and Fond des Blancs
DOI: 10.5281/zenodo.7913886
title: MMCFSv2 and MMCFSv1 Processed data for GMD Manuscript

description: This dataset was used to make all the plots in the manuscript titled "Monsoon Mission Coupled Forecast System Version 2.0: Model Description and Indian Monsoon Simulations" submitted to GMD
DOI: 10.5281/zenodo.7913885
title: MMCFSv2 and MMCFSv1 Processed data for GMD Manuscript

description: This dataset was used to make all the plots in the manuscript titled "Monsoon Mission Coupled Forecast System Version 2.0: Model Description and Indian Monsoon Simulations" submitted to GMD
DOI: 10.6084/m9.figshare.22786856
title: control group of fungal keratitis

description: control group of fungal keratitis
DOI: 10.26302/sshade/experiment_tg_20180503_001
title: Vis-VNIR optical indices of 4 Tholins films

description: Set of Visible-Very Near IR optical indices of tholins films formed with different $CH_4$ percentages in $N_2$ gas: 1%, 2%, 5%, 10%
DOI: 10.26302/sshade/experiment_yd_20160401_001
title: Olivine Hawaii Forsterite Fo88 sand 45-75 µm (C1) to 1000-2000 µm (C6) grains Vis-NIR reflectance

description: 193 Vis-NIR ASD channels of Olivine Hawaii Forsterite Fo88 sand for 6 different grain size ranges (45-75, 75-125, 125-250, 250-500, 500-1000, 1000-2000 µm)
DOI: 10.34740/kaggle/ds/3243495
title: GenHandImages
DOI: 10.5281/zenodo.7911896
title: MUSES Fractional Vegetation Coverage (FVC) 8-Day Global 1km SIN Grid in 2013

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global FVC product at 1 km spatial resolution and 8-day temporal resolution. The MUSES FVC product is provided on a Sinusoidal grid and spans from 2000 to 2019 (continuously updated). It was generated from the MUSES LAI product at 1 km resolution and other ancillary information using the complement to unity of the transmittance of light through the entire canopy in the nadir viewing direction (Xiao <em>et al</em>., 2016). The MUSES FVC values are physically consistent with the corresponding MUSES LAI values. The MUSES FVC product is spatially complete and temporally continuous. This dataset is the MUSES FVC product in 2013. <em>Please <strong>click here</strong> to download the MUSES FVC product <strong>in 2012</strong></em>, <em>and <strong>click here</strong> to download the MUSES FVC product <strong>in 2014</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2013 Spatial Resolution: 1 km Temporal Resolution: 8 days Projection: Sinusoidal Data Format: HDF Scale: 0.004 Valid Range: 0 – 250 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et a</em>l. (2016). Estimating the Fractional Vegetation Cover from GLASS Leaf Area Index Product. <em>Remote Sensing</em>, 8, 337. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).
DOI: 10.5281/zenodo.7911895
title: MUSES Fractional Vegetation Coverage (FVC) 8-Day Global 1km SIN Grid in 2013

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global FVC product at 1 km spatial resolution and 8-day temporal resolution. The MUSES FVC product is provided on a Sinusoidal grid and spans from 2000 to 2019 (continuously updated). It was generated from the MUSES LAI product at 1 km resolution and other ancillary information using the complement to unity of the transmittance of light through the entire canopy in the nadir viewing direction (Xiao <em>et al</em>., 2016). The MUSES FVC values are physically consistent with the corresponding MUSES LAI values. The MUSES FVC product is spatially complete and temporally continuous. This dataset is the MUSES FVC product in 2013. <em>Please <strong>click here</strong> to download the MUSES FVC product <strong>in 2012</strong></em>, <em>and <strong>click here</strong> to download the MUSES FVC product <strong>in 2014</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2013 Spatial Resolution: 1 km Temporal Resolution: 8 days Projection: Sinusoidal Data Format: HDF Scale: 0.004 Valid Range: 0 – 250 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et a</em>l. (2016). Estimating the Fractional Vegetation Cover from GLASS Leaf Area Index Product. <em>Remote Sensing</em>, 8, 337. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).
DOI: 10.5281/zenodo.7908381
title: Azcorra2023 - Histological images for fiber placement localization

description: Microscopy images of coronal mouse brain slices used for localization of fiber placement in striatum after acute fiber photometry experiments, as used in Azcorra et al. Nat Neuro 2023.
DOI: 10.5281/zenodo.7908382
title: Azcorra2023 - Histological images for fiber placement localization

description: Microscopy images of coronal mouse brain slices used for localization of fiber placement in striatum after acute fiber photometry experiments, as used in Azcorra et al. Nat Neuro 2023.
DOI: 10.34740/kaggle/dsv/5643450
title: 2021 World Population (updated daily)
DOI: 10.6084/m9.figshare.17708131.v1
title: How many children live with persons with problematic drinking patterns across 19 European countries?

description: The harm from others’ drinking alcohol is well documented by researchers in different countries and with different cultural backgrounds across the world. Studies highlighted the use of alcohol in a problematic way as a crucial factor for a child’s normal physical, emotional, and social development. This study estimated the prevalence of children living with at least one person with a problematic drinking pattern (PPDP) in the household in 19 European countries. Furthermore, it examined age and gender differences in the prevalence of PPDP. Data from the Standardized European Alcohol Survey project (RARHA SEAS-1) and Eurostat was used to calculate the prevalence of children living with at least one PPDP. A four-item version of the Rapid Alcohol Problems Screen test was applied. Descriptive statistics and binary logistic regression analysis were conducted with SPSS. The prevalence of children living together with a PPDP varied from 6.2% in Italy to 35.2% in Lithuania. The total number of children living with PPDP was estimated to 9,271,150 in 19 European countries in 2015. The number of children living in an environment with PPDP is particularly high. Research in this area is important to bring this issue to policy agendas.
DOI: 10.6084/m9.figshare.17708131
title: How many children live with persons with problematic drinking patterns across 19 European countries?

description: The harm from others’ drinking alcohol is well documented by researchers in different countries and with different cultural backgrounds across the world. Studies highlighted the use of alcohol in a problematic way as a crucial factor for a child’s normal physical, emotional, and social development. This study estimated the prevalence of children living with at least one person with a problematic drinking pattern (PPDP) in the household in 19 European countries. Furthermore, it examined age and gender differences in the prevalence of PPDP. Data from the Standardized European Alcohol Survey project (RARHA SEAS-1) and Eurostat was used to calculate the prevalence of children living with at least one PPDP. A four-item version of the Rapid Alcohol Problems Screen test was applied. Descriptive statistics and binary logistic regression analysis were conducted with SPSS. The prevalence of children living together with a PPDP varied from 6.2% in Italy to 35.2% in Lithuania. The total number of children living with PPDP was estimated to 9,271,150 in 19 European countries in 2015. The number of children living in an environment with PPDP is particularly high. Research in this area is important to bring this issue to policy agendas.
DOI: 10.6084/m9.figshare.17294034.v1
title: Harnessing the global expertise in drug use and drug prevention in physical activity settings: results from the Anabolic Steroid Prevention Survey

description: Recent decades have seen increased efforts internationally to prevent the use of anabolic androgenic steroids (AAS) and other image and performance-enhancing drugs (IPEDs) in gyms and fitness environments. Yet, very little is known about effective prevention strategies. This study aimed to identify key risk factors for AAS use and assess the relevance of these risk factors as targets of intervention. Seventy four (<i>n</i> = 74) IPED experts participated in the Anabolic Steroid Prevention Survey (response rate: 62.4%). A total of 18 psychosocial and two behavioral risk factors identified in a literature review were rated by participants along two dimensions: <i>importance</i> and <i>preventability</i>. The results show that most IPED experts (91%) believe that preventing AAS use in gyms is important to public health, and that AAS use can be prevented to a certain degree (91%), but not eliminated altogether (85%). Based on participants’ assessment, six risk factors were categorised as very promising (e.g. the descriptive norm and poor knowledge on AAS alternatives), 10 as promising (e.g. body dissatisfaction and drive for muscularity), and four as unpromising but worthy of consideration (e.g. AAS-using peers and perceived benefits of AAS use). To effectively prevent AAS use in gyms, interventions should attempt to reduce these risk factors.
DOI: 10.6084/m9.figshare.17294034
title: Harnessing the global expertise in drug use and drug prevention in physical activity settings: results from the Anabolic Steroid Prevention Survey

description: Recent decades have seen increased efforts internationally to prevent the use of anabolic androgenic steroids (AAS) and other image and performance-enhancing drugs (IPEDs) in gyms and fitness environments. Yet, very little is known about effective prevention strategies. This study aimed to identify key risk factors for AAS use and assess the relevance of these risk factors as targets of intervention. Seventy four (<i>n</i> = 74) IPED experts participated in the Anabolic Steroid Prevention Survey (response rate: 62.4%). A total of 18 psychosocial and two behavioral risk factors identified in a literature review were rated by participants along two dimensions: <i>importance</i> and <i>preventability</i>. The results show that most IPED experts (91%) believe that preventing AAS use in gyms is important to public health, and that AAS use can be prevented to a certain degree (91%), but not eliminated altogether (85%). Based on participants’ assessment, six risk factors were categorised as very promising (e.g. the descriptive norm and poor knowledge on AAS alternatives), 10 as promising (e.g. body dissatisfaction and drive for muscularity), and four as unpromising but worthy of consideration (e.g. AAS-using peers and perceived benefits of AAS use). To effectively prevent AAS use in gyms, interventions should attempt to reduce these risk factors.
DOI: 10.21954/ou.rd.22786511
title: <strong>Education 4.0 in higher education and Computer Science: a systematic review dataset</strong>

description: This dataset is based upon the literature review published in the paper <br> Rienties, B., Ferguson, R., Gonda, D., Hajdin, G., Herodotou, C., Iniesto, F., Llorens-Garcia, A., Muccini, H., Sargent, J., Virkus, S., Vittoria Isidori, M. (2024). Education 4.0 in higher education and Computer Science: a systematic review. <em>Computer Applications in Engineering Education. </em> Education 4.0 is a recently introduced concept focused on innovation, novelty, use of technology, and connections with employment and industry. In particular in engineering disciplines like computer science (CS) it is essential that educators keep up to date with industry developments. Indeed, how CS educators effectively design and implement innovative teaching and learning deserves more systematic attention. This study aims to catalogue and synthesise learning design approaches to teaching and learning within CS: 1) Which innovative pedagogic approaches are used in teaching of CS? 2) Which approaches align with Education 4.0? 3) What skills and competences do educators require to align CS teaching with Education 4.0? Our systematic literature review included CS papers published between 2016 and 2020. 231 studies were identified of which 66 were included in the final phase, which were coded by a multidisciplinary team. The findings indicated that many CS educators included Education 4.0 learning design elements. We found a clear distinctive three-cluster solution: 1) EDU4 light, 2) Project-based/hands-on learning, and 3) Full EDU4. These findings suggest three broad flavours when designing innovative CS practice, which might help educators to align their practice. <br> The dataset contains three worksheets -Main worksheet with all the used codes -Variables and their labels -Syntax for SPSS to run the dataset (if needed)
DOI: 10.21954/ou.rd.22786511.v1
title: <strong>Education 4.0 in higher education and Computer Science: a systematic review dataset</strong>

description: This dataset is based upon the literature review published in the paper <br> Rienties, B., Ferguson, R., Gonda, D., Hajdin, G., Herodotou, C., Iniesto, F., Llorens-Garcia, A., Muccini, H., Sargent, J., Virkus, S., Vittoria Isidori, M. (2024). Education 4.0 in higher education and Computer Science: a systematic review. <em>Computer Applications in Engineering Education. </em> Education 4.0 is a recently introduced concept focused on innovation, novelty, use of technology, and connections with employment and industry. In particular in engineering disciplines like computer science (CS) it is essential that educators keep up to date with industry developments. Indeed, how CS educators effectively design and implement innovative teaching and learning deserves more systematic attention. This study aims to catalogue and synthesise learning design approaches to teaching and learning within CS: 1) Which innovative pedagogic approaches are used in teaching of CS? 2) Which approaches align with Education 4.0? 3) What skills and competences do educators require to align CS teaching with Education 4.0? Our systematic literature review included CS papers published between 2016 and 2020. 231 studies were identified of which 66 were included in the final phase, which were coded by a multidisciplinary team. The findings indicated that many CS educators included Education 4.0 learning design elements. We found a clear distinctive three-cluster solution: 1) EDU4 light, 2) Project-based/hands-on learning, and 3) Full EDU4. These findings suggest three broad flavours when designing innovative CS practice, which might help educators to align their practice. <br> The dataset contains three worksheets -Main worksheet with all the used codes -Variables and their labels -Syntax for SPSS to run the dataset (if needed)
DOI: 10.5281/zenodo.7825921
title: The energy landscape for R-loop formation by the CRISPR-Cas Cascade complex - Minimal Dataset

description: Minimal Dataset for "The energy landscape for R-loop formation by the CRISPR-Cas Cascade complex", published at NSMB.
description: This work was supported by grants from the European Research Council (GA 724863) and the Deutsche Forschungsgemeinschaft (SPP2141, SE 1646/8-1) to R.S.. J.M.M was supported by a postdoctoral fellowship of the Alexander von Humboldt Foundation.
DOI: 10.5281/zenodo.7825920
title: The energy landscape for R-loop formation by the CRISPR-Cas Cascade complex - Minimal Dataset

description: Minimal Dataset for "The energy landscape for R-loop formation by the CRISPR-Cas Cascade complex", published at NSMB.
description: This work was supported by grants from the European Research Council (GA 724863) and the Deutsche Forschungsgemeinschaft (SPP2141, SE 1646/8-1) to R.S.. J.M.M was supported by a postdoctoral fellowship of the Alexander von Humboldt Foundation.
DOI: 10.5281/zenodo.7915176
title: Dataset from Paper "Simultaneously Incorporating Atomically Dispersed Co-Nx sites with Graphitic Carbon Layer-Wrapped Co9S8 Nanoparticles for Oxygen Reduction in Acidic Electrolyte" DOI: 10.1002/celc.202300110

description: The data in this spreadsheet was used to produce the figures in the paper Authors: Jun Wu, Mengjun Gong, Wuyi Zhang, Asad Mehmood, Jinfeng Zhang, Ghulam Ali, Anthony Kucernak Title: Simultaneously Incorporating Atomically Dispersed Co-Nx sites with Graphitic Carbon Layer-Wrapped Co9S8 Nanoparticles for Oxygen Reduction in Acidic Electrolyte Journal: ChemElectroChem DOI: 10.1002/celc.202300110 Please cite the above reference if you wish to use this data
DOI: 10.5281/zenodo.7915175
title: Dataset from Paper "Simultaneously Incorporating Atomically Dispersed Co-Nx sites with Graphitic Carbon Layer-Wrapped Co9S8 Nanoparticles for Oxygen Reduction in Acidic Electrolyte" DOI: 10.1002/celc.202300110

description: The data in this spreadsheet was used to produce the figures in the paper Authors: Jun Wu, Mengjun Gong, Wuyi Zhang, Asad Mehmood, Jinfeng Zhang, Ghulam Ali, Anthony Kucernak Title: Simultaneously Incorporating Atomically Dispersed Co-Nx sites with Graphitic Carbon Layer-Wrapped Co9S8 Nanoparticles for Oxygen Reduction in Acidic Electrolyte Journal: ChemElectroChem DOI: 10.1002/celc.202300110 Please cite the above reference if you wish to use this data
DOI: 10.34740/kaggle/dsv/5643565
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.6084/m9.figshare.22616599.v1
title: Supplementary Material for: Low-Molecular-Weight Hyaluronic Acid Contributes to Noise-Induced Cochlear Inflammation

description: Introduction: Our previous work indicated that the activation of the Toll-like receptor (TLR) 4 signaling pathway contributed to noise-induced cochlear inflammation. Previous studies have reported that low-molecular-weight hyaluronic acid (LMW-HA) accumulates during aseptic trauma and promotes inflammation by activating the Toll-like receptor (TLR) 4 signaling pathway. We hypothesized that LMW-HA or enzymes synthesizing or degrading HA might be involved in noise-induced cochlear inflammation. Methods: The present study included two arms. The first arm was the noise exposure study, in which TLR4, proinflammatory cytokines, HA, hyaluronic acid synthases (HASs) and hyaluronidases (HYALs) in the cochlea as well as auditory brainstem response (ABR) thresholds were measured before and after noise exposure. The second arm was analysis of HA delivery-induced reactions, in which control solution, high-molecular-weight hyaluronic acid (HMW-HA) or LMW-HA was delivered into the cochlea by cochleostomy or intratympanic injection. Then, the ABR threshold and cochlear inflammation were measured. Results: After noise exposure, the expression of TLR4, proinflammatory cytokines, HAS1 and HAS3 in the cochlea significantly increased over the 3rd to 7th day post-noise exposure (PE3, PE7). The expression of HYAL2 and HYAL3 dramatically decreased immediately after noise exposure, gradually increased thereafter to levels significantly greater than the preexposure level on PE3, and then rapidly returned to the preexposure level on PE7. The expression of HA, HAS2 and HYAL1 in the cochlea remained unchanged after exposure. After cochleostomy or intratympanic injection, both the hearing threshold shifts and the expression of TLR4, TNF-α and IL-1β in the cochleae of the LMW-HA group were obviously greater than those of the control group and HMW-HA group. The expression of proinflammatory cytokines in the LMW-HA and control groups on the 7th day (D7) after cochleostomy tended to increase compared to that on the 3rd day (D3), whereas levels in the HMW-HA group tended to decrease on D7 compared to D3. Conclusion: HAS1, HAS3, HYAL2 and HYAL3 in the cochlea are involved in acoustic trauma-induced cochlear inflammation through the potential proinflammatory function of LMW-HA.
DOI: 10.5281/zenodo.7915258
title: Optimized strucures of triangulene dimers

description: Optimized geometry of triangulene dimers at the PBE0/def2-TZVP level.
DOI: 10.5281/zenodo.7915257
title: Optimized strucures of triangulene dimers

description: Optimized geometry of triangulene dimers at the PBE0/def2-TZVP level.