cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/inscriptifact-ouc110657114
title: Persepolis Fortification Elamite Tablet 2036.101, Fort 2036.101

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2036.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform, Aramaic ❧ [Physical Object Description:] Clay tablet with cuneiform text and Aramaic text. ❧ [Physical Object Note:] Cracks on bottom edge, left edge, obverse, reverse. Right edge, upper edge broken off.
DOI: 10.25549/inscriptifact-ouc110658212
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.15468/dl.3cxhte
title: Occurrence Download

description: A dataset containing 90 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Isognomon alatus"
 ]
}

 The dataset includes 90 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026032-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc110657112
title: Persepolis Fortification Elamite Tablet 2036.101, Fort 2036.101

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2036.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform, Aramaic ❧ [Physical Object Description:] Clay tablet with cuneiform text and Aramaic text. ❧ [Physical Object Note:] Cracks on bottom edge, left edge, obverse, reverse. Right edge, upper edge broken off.
DOI: 10.25549/inscriptifact-ouc110658214
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.25549/inscriptifact-ouc110658211
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.25549/inscriptifact-ouc110659462
title: Persepolis Fortification Elamite Tablet 0308.101, Fort 0308.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 0308.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Horizontal crack on tablet, large chunk of lower right broken off, including all of the right edge.
DOI: 10.25549/inscriptifact-ouc110658210
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.25549/inscriptifact-ouc110659435
title: Persepolis Fortification Elamite Tablet 0308.101, Fort 0308.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 0308.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Horizontal crack on tablet, large chunk of lower right broken off, including all of the right edge.
DOI: 10.25549/inscriptifact-ouc110658207
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.25549/inscriptifact-ouc110659433
title: Persepolis Fortification Elamite Tablet 0308.101, Fort 0308.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 0308.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Horizontal crack on tablet, large chunk of lower right broken off, including all of the right edge.
DOI: 10.25549/inscriptifact-ouc110659430
title: Persepolis Fortification Elamite Tablet 0308.101, Fort 0308.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 0308.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Horizontal crack on tablet, large chunk of lower right broken off, including all of the right edge.
DOI: 10.25549/inscriptifact-ouc110659426
title: Persepolis Fortification Elamite Tablet 0308.101, Fort 0308.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 0308.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Horizontal crack on tablet, large chunk of lower right broken off, including all of the right edge.
DOI: 10.25549/inscriptifact-ouc110659424
title: Persepolis Fortification Elamite Tablet 0308.101, Fort 0308.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 0308.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Horizontal crack on tablet, large chunk of lower right broken off, including all of the right edge.
DOI: 10.25549/inscriptifact-ouc110659428
title: Persepolis Fortification Elamite Tablet 0308.101, Fort 0308.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 0308.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Horizontal crack on tablet, large chunk of lower right broken off, including all of the right edge.
DOI: 10.25549/inscriptifact-ouc110658302
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.25549/inscriptifact-ouc110659410
title: Persepolis Fortification Elamite Tablet 0308.101, Fort 0308.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 0308.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Horizontal crack on tablet, large chunk of lower right broken off, including all of the right edge.
DOI: 10.25549/inscriptifact-ouc110658301
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.25549/inscriptifact-ouc110659391
title: Persepolis Fortification Elamite Tablet 0308.101, Fort 0308.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 0308.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Horizontal crack on tablet, large chunk of lower right broken off, including all of the right edge.
DOI: 10.25549/inscriptifact-ouc110658298
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.6084/m9.figshare.30581282
title: Molecular Dynamics (MD) Simulation Data: Taurocholic Acid Transportation by OSTα/OSTβ

description: Human OSTα/OSTβ is a vital bile acid (BA) transporter. This study elucidated its structure and transport mechanism using cryo-EM and molecular dynamics.Cryo-EM revealed OSTα/OSTβ as a novel "dimer of heterodimers," with an OSTα homodimer core and peripheral OSTβs. OSTα, with a GPCR-fold, features a BA recognition site involving a cysteine-rich loop and transmembrane helices. A positive cavity facilitates BA translocation.Molecular dynamics (MD) simulations, including well-tempered metadynamics (wt-MetaD), detailed the taurocholic acid (TCA) transport pathway. It involves a "head-down" to "head-up" flip across the membrane, moving through intermediate states within a positive cavity. Polar residues guide the BA towards the extracellular side.This repository contains molecular dynamics (MD) simulation data aimed at elucidating the transportation of taurocholic acid (TCA) by the OSTα/OSTβ protein complex embedded within a POPC lipid bilayer.<br>Directory StructureMD_system_parameters.csv: This file details the system composition and the simulation box dimensions used for all MD simulations.POPC_CMD/: This directory contains data from Conventional Molecular Dynamics (CMD) simulations.POPC_MetaD/: This directory contains data from Metadynamics (MetaD) simulations.<br>Conventional Molecular Dynamics (CMD) Data (POPC_CMD/)This directory includes three independent conventional molecular dynamics simulation runs. These simulations provide insights into the dynamic behavior of the system under standard conditions.Files:runX_0ns.pdb: Initial PDB (Protein Data Bank) coordinate file for run X (where X is 1, 2, or 3) at 0 nanoseconds. These files represent the starting configuration for each simulation.runX_500ns.pdb: Final PDB coordinate file for run X (where X is 1, 2, or 3) after 500 nanoseconds of simulation. These files capture the system's configuration at the end of each run.runX_all_trj.xtc: Compressed trajectory file for the entire duration of run X (where X is 1, 2, or 3). These files contain atomic coordinates over time, allowing for detailed analysis of molecular motion and interactions throughout the simulation.<br>Metadynamics (MetaD) Data (POPC_MetaD/)This directory includes data from a Metadynamics simulation. Metadynamics is a powerful enhanced sampling technique often used to explore complex free energy landscapes, particularly relevant for understanding transport processes and conformational changes.Files:Meta_ini.pdb: Initial PDB coordinate file used for the Metadynamics simulation. This represents the starting configuration for the enhanced sampling run.Meta_trj.xtc: Compressed trajectory file for the Metadynamics simulation. This trajectory can be analyzed to reconstruct free energy profiles and pathways related to TCA transportation.
DOI: 10.6084/m9.figshare.30581282.v1
title: Molecular Dynamics (MD) Simulation Data: Taurocholic Acid Transportation by OSTα/OSTβ

description: Human OSTα/OSTβ is a vital bile acid (BA) transporter. This study elucidated its structure and transport mechanism using cryo-EM and molecular dynamics.Cryo-EM revealed OSTα/OSTβ as a novel "dimer of heterodimers," with an OSTα homodimer core and peripheral OSTβs. OSTα, with a GPCR-fold, features a BA recognition site involving a cysteine-rich loop and transmembrane helices. A positive cavity facilitates BA translocation.Molecular dynamics (MD) simulations, including well-tempered metadynamics (wt-MetaD), detailed the taurocholic acid (TCA) transport pathway. It involves a "head-down" to "head-up" flip across the membrane, moving through intermediate states within a positive cavity. Polar residues guide the BA towards the extracellular side.This repository contains molecular dynamics (MD) simulation data aimed at elucidating the transportation of taurocholic acid (TCA) by the OSTα/OSTβ protein complex embedded within a POPC lipid bilayer.<br>Directory StructureMD_system_parameters.csv: This file details the system composition and the simulation box dimensions used for all MD simulations.POPC_CMD/: This directory contains data from Conventional Molecular Dynamics (CMD) simulations.POPC_MetaD/: This directory contains data from Metadynamics (MetaD) simulations.<br>Conventional Molecular Dynamics (CMD) Data (POPC_CMD/)This directory includes three independent conventional molecular dynamics simulation runs. These simulations provide insights into the dynamic behavior of the system under standard conditions.Files:runX_0ns.pdb: Initial PDB (Protein Data Bank) coordinate file for run X (where X is 1, 2, or 3) at 0 nanoseconds. These files represent the starting configuration for each simulation.runX_500ns.pdb: Final PDB coordinate file for run X (where X is 1, 2, or 3) after 500 nanoseconds of simulation. These files capture the system's configuration at the end of each run.runX_all_trj.xtc: Compressed trajectory file for the entire duration of run X (where X is 1, 2, or 3). These files contain atomic coordinates over time, allowing for detailed analysis of molecular motion and interactions throughout the simulation.<br>Metadynamics (MetaD) Data (POPC_MetaD/)This directory includes data from a Metadynamics simulation. Metadynamics is a powerful enhanced sampling technique often used to explore complex free energy landscapes, particularly relevant for understanding transport processes and conformational changes.Files:Meta_ini.pdb: Initial PDB coordinate file used for the Metadynamics simulation. This represents the starting configuration for the enhanced sampling run.Meta_trj.xtc: Compressed trajectory file for the Metadynamics simulation. This trajectory can be analyzed to reconstruct free energy profiles and pathways related to TCA transportation.
DOI: 10.25549/inscriptifact-ouc110659390
title: Persepolis Fortification Elamite Tablet 0308.101, Fort 0308.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 0308.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Horizontal crack on tablet, large chunk of lower right broken off, including all of the right edge.
DOI: 10.25549/inscriptifact-ouc110658280
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.25549/inscriptifact-ouc110658252
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.25549/inscriptifact-ouc110658247
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.25549/inscriptifact-ouc110658278
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.25549/inscriptifact-ouc110658244
title: Persepolis Fortification Elamite Tablet 2262.102, Fort 2262.102

description: [Text Description:] Administrative text with seal ❧ [Text or Publication Number Note:] Fort 2262.102 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Upper edge broken off. Cracks on bottom edge, left edge, obverse, reverse, right edge.
DOI: 10.25549/inscriptifact-ouc110661614
title: Persepolis Fortification Elamite Tablet 0435.101, Fort 0435.101

description: [Text Description:] Administrative text ❧ [Text or Publication Number Note:] Fort 0435.101 ❧ [Excavation Description:] Found during Oriental Institute's excavations in Spring, 1933, near the northeastern corner of the stone platform of Persepolis, in two small rooms of a bastion in the fortification wall ❧ [Medium:] Clay ❧ [Script Note:] Non-Alphabetic Cuneiform ❧ [Physical Object Description:] Clay tablet with cuneiform text. ❧ [Physical Object Note:] Broken bottom edge, upper edge. Cracks on obverse and reverse.