cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.d4q54/2
title: Experiment 1 data

description: Infection data produced from our first experiment that tested the effect of exposure frequency and post-exposure habitat switching in the absence of choice.
DOI: 10.5061/dryad.d4q54/3
title: Experiment 2 cumulative data

description: Data produced from our second experiment that tracked newts in aquatic and terrestrial habitats while exposing them to varying concentration of in aquatic habitats. Data contains cumulative measures (pooled across all days) of aquatic and terrestrial habitat use as well as Bd infections exhibited at the end of the experiment.
DOI: 10.5061/dryad.d4q54/4
title: Experiment 2 data - By phase

description: Data produced from our second experiment that tracked newts in aquatic and terrestrial habitats while exposing them to varying concentration of in aquatic habitats. Data were averaged over days for phase 1 and phase 2.
DOI: 10.5061/dryad.d4q54/5
title: Experiment 2 daily data

description: Data produced from our second experiment. Individual data on habitat use for each day of the experiment, as well as Bd infections exhibited at the end of the experiment.
DOI: 10.5061/dryad.d4q54/6
title: Spain and UK field data

description: infection loads of positive samples collected from our field surveillance.
DOI: 10.5061/dryad.f0h35.1
title: Data from: High temporal variability in the occurrence of consumer–resource interactions in ecological networks
DOI: 10.5061/dryad.f4245/1
title: crosscorr_browsing

description: Data used in cross-correlation to test the impact of the abundance and nutritional quality of neighbours on balsam fir browsing in Champagne, Moore, Côté and Tremblay. Spatial correlations between browsing on balsam fir by white-tailed deer and the nutritional value of neighbouring winter forage
DOI: 10.5061/dryad.f4245/2
title: landscape_config

description: Data used to investigate the effect of landscape configuration on balsam fir browsing by deer
in Champagne, Moore, Côté and Tremblay. Spatial correlations between browsing on balsam fir by white-tailed deer and the 
nutritional value of neighbouring winter forage
DOI: 10.5061/dryad.ff072/1
title: halibut_genepop

description: File containing all genotypes. File in Genepop format. Locus names are formatted with an underscore between the RADtag name and SNP position.
DOI: 10.5061/dryad.ff072/2
title: supplemental_material_199_sex_assays

description: Results of two TaqMan assays linked to sex.
DOI: 10.5061/dryad.ff072/3
title: supplemental_material_primers_and_probes

description: Primer and probe sequences for TaqMan assays.
DOI: 10.5061/dryad.ff072/4
title: supplemental_materials_alignments

description: Alignments between Pacific halibut loci and 1) Atlantic halibut linkage map, 2) turbot genome, and 3) half-smooth tongue sole genome.
DOI: 10.5061/dryad.gp557/1
title: step_lengths_primates

description: This file contains the R code and the step length data from the six species of primates. With this file anyone can run the analyses contrasting Brownian versus long-tailed distribution movements
DOI: 10.5061/dryad.gp557/2
title: stepLengths

description: This file contains all data for the six species in cvs format
DOI: 10.5061/dryad.jf36b/1
title: Cape_Horn_invertebrate_data

description: Data collected in the field. Excel file format. Region: Fjords, Cape Horn, Diego Ramirez
Island: Canel Barbara, Diego Ramirez, Isla Grevy, Isla Hermite, Isla Herschel, Isla Hornos, Isla Wollaston
Station: 1-18
Sample: 1, 2
Date: dd-MMM-yr
Lat: Latitude – decimal degrees WGS84
Long: Longitude - decimal degrees WGS84
Depth: M
Species: Scientific name
Count: number
Num_m^2: Number per meter squared
DOI: 10.5061/dryad.jf36b/2
title: Cape_Horn_fish_data

description: Data collected in the field. Excel file format. Region: Fjords, Cape Horn, Diego Ramirez
Island: Canel Barbara, Diego Ramirez, Isla Grevy, Isla Hermite, Isla Herschel, Isla Hornos, Isla Wollaston
Station: 1-18
Sample: 1, 2
Date: dd-MMM-yr
Lat: Latitude – decimal degrees WGS84
Long: Longitude - decimal degrees WGS84
Depth: M
Species: Scientific name
Count: number
Num_m^2: Number per meter squared
DOI: 10.5061/dryad.k36t400/1
title: Jacob et al _ data

description: Phenotypic data of great tits, chemical composition of uropygial gland secretions and composition of great tits microbiota
DOI: 10.5061/dryad.kf01h4b/1
title: Rodríguez-Gómez&Ornelas_Microsatellites_info
DOI: 10.5061/dryad.kf01h4b/2
title: Rodríguez-Gómez&Ornelas_Morphology_info
DOI: 10.5061/dryad.ms343.2
title: Data from: Compromised external validity: federally produced cannabis does not reflect legal markets
DOI: 10.5061/dryad.ms343.2/1.2
title: raw_data_chemotypes

description: This is the raw data used to analyze the chemotypes from the different locations across the US
DOI: 10.5061/dryad.ms343.2/2.2
title: for_pca_11042016

description: Dataset used for the PCA analysis
DOI: 10.5061/dryad.nf85s5k/1
title: Martinez_Fridley_2018_seasonalplasticity

description: Seasonal leaf traits and modeled photosynthetic parameters for Syracuse, NY common garden shrubs. Data were collected in May, July, and October of 2015.
DOI: 10.5061/dryad.r6049/1
title: All Summaries

description: All data for average colony behavior and attributes, and host tree attributes (size, leaf damage, canopy cover, etc.).
DOI: 10.5061/dryad.r6049/2
title: Response to intruder

description: Time course data for each response to intruder trial - time stamp seconds indicates when an Azteca ant crossed the focal internode.
DOI: 10.5061/dryad.r6049/3
title: Patrolling Behavior

description: Data for each patrolling trial with total number referring to total number of ants crossing the focal internode in 5 minutes.
DOI: 10.5061/dryad.sv4md/1
title: Characterization of BSC communities
DOI: 10.5061/dryad.sv4md/2
title: Ecosystem functions and estimation of multifunctionality
DOI: 10.5061/dryad.vf4kh/2
title: Supplemental Data - Regional Volume Measures

description: This file contains regional volume measures for 8 brain areas, as well as large-scale volume measures (total intracranial volume and total brain volume) for each subject.
DOI: 10.17632/pc85kmhsbc.1
title: Data for: Synthetic 4,6-dihydroxy pyrimidine diones as urease inhibitors˗-In vitro, in silico, and kinetic studies

description: These are attachments of electronic version files of NMR. Required by reviewer inrevised manuscript.
DOI: 10.5061/dryad.07390/1
title: DNA Alignment for Miconia clasei

description: A concatenated nexus file of nrDNA (ITS & ETS) and plastid accD-psaI and psbK-psbI
DOI: 10.5061/dryad.07390/2
title: Tree file of bootstrap search

description: Tree file of bootstrap search for DNA data alignment (including ITS, ETS, accD-psaI, and psbK-psbI)
DOI: 10.5061/dryad.0p401/1
title: Morphological measurements of alarm cue-exposed and control Pelvicachromis taeniatus

description: This data originates from a laboratory study on Pelvicachromis taeniatus. In a split-clutch design, fish were raised under different levels of perceived predation risk (conspecific alarm cues or distilled water) and the morphological data contained in this document was obtained across developmental stages for two years. Column headings contain both the variable name (before the dot) and the unit (after the dot) where applicable. d=day. Detailed  information on how this data was obtained is contained in the corresponding manuscript.
DOI: 10.5061/dryad.20g1d/1
title: R scripts and results

description: The zip-file contains R scripts used to simulate and estimate parameters. See the readme.txt file for more info.
DOI: 10.5061/dryad.269k8/1
title: figures data base

description: Here is the data used to produce the presented figures of the article: "The rise of health biotechnology research in Latin America: A scientometric analysis of health biotechnology production and impact in Argentina, Brazil, Chile, Colombia, Cuba and Mexico"
DOI: 10.5061/dryad.269k8/2
title: Main data base

description: Here is the main database of the paper production by the six Latin American countries studied in the article: "The rise of health biotechnology research in Latin America: A scientometric analysis of health biotechnology production and impact in Argentina, Brazil, Chile, Colombia, Cuba and Mexico". The information is organized in different tabs. Each tab is identified with a country name.
DOI: 10.5061/dryad.27g26/1
title: Fig 2

description: Energy spectrum of FTO/TiO2/CdS/Mn:CdSe photoelectrode.
DOI: 10.5061/dryad.27g26/2
title: Fig 3

description: UV-vis absorption spectra of bare TiO2, TiO2/CdS/CdSe, and TiO2/CdS/Mn:CdSe.
DOI: 10.5061/dryad.27g26/3
title: Fig 4

description: J-V curve of QDSSCs based on CdS/CdSe and CdS/Mn:CdSe QDs.
DOI: 10.5061/dryad.27g26/4
title: Fig 5

description: Nyquist plot and Bode plot of the QDSSCs under 100 mWcm−2 illumination and the frequency ranging from 0.1 Hz to 500 kHz at room temperature.
DOI: 10.5061/dryad.288c2/1
title: GeneTree_DataFiles.tar
DOI: 10.5061/dryad.288c2/2
title: jAFS_dataFiles.tar
DOI: 10.5061/dryad.288c2/3
title: alnusBarcodes

description: Barcodes to process ddRAD data
DOI: 10.5061/dryad.288c2/4
title: Alnus_R1

description: Alnus rubra paired-end ddRadseq; R1 reads. fastq.gz file ~2.95GB
DOI: 10.5061/dryad.288c2/5
title: Alnus_R2

description: Alnus rubra paired-end ddRadseq; R2 reads. fastq.gz file ~2.95GB
DOI: 10.5061/dryad.2fk71/11
title: Data.zip, Part 10 of 31
DOI: 10.5061/dryad.2fk71/12
title: Data.zip, Part 11 of 31
DOI: 10.5061/dryad.2fk71/13
title: Data.zip, Part 12 of 31
DOI: 10.5061/dryad.2fk71/14
title: Data.zip, Part 13 of 31
DOI: 10.5061/dryad.2fk71/15
title: Data.zip, Part 14 of 31
DOI: 10.5061/dryad.2fk71/16
title: Data.zip, Part 15 of 31
DOI: 10.5061/dryad.2fk71/17
title: Data.zip, Part 16 of 31
DOI: 10.5061/dryad.2fk71/18
title: Data.zip, Part 17 of 31
DOI: 10.5061/dryad.2fk71/19
title: Data.zip, Part 18 of 31
DOI: 10.5061/dryad.2fk71/20
title: Data.zip, Part 19 of 31
DOI: 10.5061/dryad.3q26p/2
title: Supplementary table 2

description: Filtered differentially expressed 38 predicted targets of differentially expressed miRNA at 3 and 7 weeks.
DOI: 10.5061/dryad.3vh79/1
title: Vegetation map

description: “veg_map.zip” contains our vegetation cover layer ("SJMA_residential.tif"), classified into residential and non-residential.
Class 1= non-vegetation
Class 2= non-residential vegetation
Class 3= residential vegetation.
Spatial Reference: NAD_1983_StatePlane_Puerto_Rico_Virgin_Islands_FIPS_5200
DOI: 10.5061/dryad.5dd92/10
title: Sequencing images. imaging field 4, part 1 of 3

description: Sequencing images. imaging field 4, part 1 of 3
DOI: 10.5061/dryad.5dd92/11
title: Sequencing images. imaging field 4, part 2 of 3

description: Sequencing images. imaging field 4, part 2 of 3
DOI: 10.5061/dryad.5dd92/12
title: Sequencing images. imaging field 4, part 3 of 3

description: Sequencing images. imaging field 4, part 3 of 3
DOI: 10.5061/dryad.5dd92/4
title: Sequencing images. imaging field 2, part 1 of 3

description: Sequencing images. imaging field 2, part 1 of 3
DOI: 10.5061/dryad.5dd92/5
title: Sequencing images. imaging field 2, part 2 of 3

description: Sequencing images. imaging field 2, part 2 of 3
DOI: 10.5061/dryad.5dd92/6
title: Sequencing images. imaging field 2, part 3 of 3

description: Sequencing images. imaging field 2, part 3 of 3
DOI: 10.5061/dryad.5dd92/7
title: Sequencing images. imaging field 3, part 1 of 3

description: Sequencing images. imaging field 3, part 1 of 3
DOI: 10.5061/dryad.5dd92/8
title: Sequencing images. imaging field 3, part 2 of 3

description: Sequencing images. imaging field 3, part 2 of 3
DOI: 10.5061/dryad.5dd92/9
title: Sequencing images. imaging field 3, part 3 of 3

description: Sequencing images. imaging field 3, part 3 of 3
DOI: 10.5061/dryad.6k1s9d4/10
title: Partition file for concatenated Sanger data with gaps coded

description: Partition file, with gene-wise partitions and a single separate partition for gap data.
DOI: 10.5061/dryad.6k1s9d4/11
title: RAxML best tree: 7 Sanger loci, unpartitioned

description: The best tree with with boostrap frequencies, using the full Sanger dataset without gaps or partitions. Population codes follow the text; note this is an unrooted tree.
DOI: 10.5061/dryad.6k1s9d4/12
title: RAxML best tree: 7 Sanger loci, partitioned

description: The best tree with with boostrap frequencies, using the full Sanger dataset without gaps but with seven partitions. Population codes follow the text; note this is an unrooted tree.
DOI: 10.5061/dryad.6k1s9d4/13
title: RAxML best tree: 7 Sanger loci, unpartitioned, reduced missing data

description: The best tree with with boostrap frequencies, using reduced Sanger dataset without gaps or partitions. Sites with higher missing data were removed as described in the text. Population codes follow the text; note this is an unrooted tree.
DOI: 10.5061/dryad.6k1s9d4/5
title: NGS_gene_alignments

description: Alignments for the 277 gene alignments generated from NGS data.
DOI: 10.5061/dryad.6k1s9d4/6
title: Best ML trees from NGS data

description: The best ML trees for the 277 NGS genes, used for ASTRAL-II analyses
DOI: 10.5061/dryad.6k1s9d4/7
title: Bootstrapped ML trees from NGS data

description: The bootstrapped ML trees for the 277 NGS genes, used for ASTRAL-II analyses.
DOI: 10.5061/dryad.6k1s9d4/8
title: Allele table

description: The allele table used to assign population samples to putative species for ASTRAL-II.
DOI: 10.5061/dryad.6k1s9d4/9
title: Concatenated Sanger data with gaps coded

description: The seven Sanger loci concatenated, with a final binary partition for gap characters.
DOI: 10.5061/dryad.92n4m/1
title: Community composition and species interactions

description: The file contains the plant (g of leaf dry mass sampled), herbivore (number of individuals sampled) and parasitoid (number of individuals sampled) composition of native and exotic forests. Also, the plant-herbivore and the herbivore-parasitoid interactions sampled across all sampling sites. Sampling was conducted in eight sites (New Zealand), each of them formed by native Nothofagaceae forest adjacent to exotic Pinus radiata plantation forest. Each forest type within a site was considered a plot, and we sampled at the edge and interior of each forest type (i.e. subplots).
DOI: 10.5061/dryad.9d84j/1
title: Morphological parameters of adult daphnia magna

description: This Excel sheet contains the morphological parameters of the adult Daphnids (Daphnia magna) examined during the experiment until primiparity to the 5th clutch.
DOI: 10.5061/dryad.9m47pj0/1
title: Supplementary Data

description: Scores for gesture, sexual dichromatism, and plumage pigment origin.
DOI: 10.5061/dryad.9v8c4/1
title: Chernobyl_Grasshoppers_DNA damage_2017_Dryad

description: Data on DNA damage, developmental times, and wing fluctuating asymmetry in grasshoppers (Chorthippus albomarginatus) from various levels of parental radiation exposure (as indicated by their site of origin), at the level of individual insects and averaged within family.
DOI: 10.5061/dryad.h9g697r/1
title: Leung et al. worm, immune, and weight data for main experiment

description: Metadata file describing the individual mice used in the main experiment are presented. Mice are distinguished by their ID number. Data on location, infection status, endpoint worm information, immune responses, and weight are presented. Worm length/biomass and immune data have been log-transformed to meet assumptions of analysis.
DOI: 10.5061/dryad.h9g697r/2
title: Leung et al. worm and immune data for STAT6 experiment

description: Metadata file describing the individual mice used in the STAT6-/- experiment are presented. Mice are distinguished by their ID number. Data on location, infection status, endpoint worm information, and immune responses are presented. Worm length/biomass and immune data have been log-transformed to meet assumptions of analysis.
DOI: 10.5061/dryad.h9g697r/3
title: Leung et al. nutrition data for main experiment

description: Data on the nutrition (total protein, albumin, and leptin) of individual mice in the main experiment are presented. Nutritional data have been log-transformed to meet assumptions of analysis.
DOI: 10.5061/dryad.ms343.1
title: Data from: Compromised external validity: federally produced cannabis does not reflect legal markets
DOI: 10.5061/dryad.ms343.1/1.1
title: raw_data_chemotypes

description: This is the raw data used to analyze the chemotypes from the different locations across the US
DOI: 10.5061/dryad.pc602/1
title: Data
DOI: 10.5061/dryad.r6049/4
title: Response to Leaf Damage

description: Data for each response to leaf damage trial where the number of workers on the focal leaf are counted every minute.
DOI: 10.5061/dryad.r6049/5
title: Response to Vibrational Disturbance

description: Time course data for each response to vibrational disturbance trial - time stamp seconds indicate when an Azteca ant crossed the focal internode.
DOI: 10.5061/dryad.r6049/6
title: Explore Behavior

description: Time course data for each exploration trial - time stamp seconds indicates when an Azteca ant crossed the 2-cm mark on the dowel rod.
DOI: 10.5061/dryad.rg22r/1
title: Wiper et al. - Data - Heterozygosity

description: Herein contains the genotype information (allele sizes) for 10 polymorphic microsatellite markers used to obtain the heterozygosity estimates outlined in the manuscript.
DOI: 10.5061/dryad.rg22r/2
title: Wiper et al. - Data - Morphology and Laterality

description: The attached excel file contains all data used to calculate somatic trade-off and laterality differences of two brain regions (optic tectum and cerebellum) between our four inbreeding level groups, as outlined in the manuscript.
DOI: 10.5061/dryad.vb188/1
title: Johnson et al. 2018 Functional Ecol data

description: This file contains all pressure-volume curve, leaf hydraulic vulnerability curve and water potential data used in this study.
DOI: 10.5061/dryad.2631p/1
title: Raw Data: Space use by 4 strains laying hens

description: Spreadsheet containing information on length, width and area occupied by 4 genetic strains of laying hens performing the behaviors of lying, standing, perching, wing flapping and dust bathing.
DOI: 10.5061/dryad.2ff46/1
title: Zeale sequences

description: Sequences filtered by DAMe using 2/3 filtering strategy and a minimum copy number of 2.
DOI: 10.5061/dryad.2ff46/2
title: Epp sequences

description: Sequences filtered by DAMe using 2/3 filtering strategy and a minimum copy number of 2.
DOI: 10.5061/dryad.2fk71/21
title: Data.zip, Part 20 of 31
DOI: 10.5061/dryad.2fk71/22
title: Data.zip, Part 21 of 31
DOI: 10.5061/dryad.2fk71/23
title: Data.zip, Part 22 of 31
DOI: 10.5061/dryad.2fk71/24
title: Data.zip, Part 23 of 31
DOI: 10.5061/dryad.2fk71/25
title: Data.zip, Part 24 of 31
DOI: 10.5061/dryad.2fk71/26
title: Data.zip, Part 25 of 31
DOI: 10.5061/dryad.2fk71/27
title: Data.zip, Part 26 of 31
DOI: 10.5061/dryad.2fk71/28
title: Data.zip, Part 27 of 31
DOI: 10.5061/dryad.2fk71/29
title: Data.zip, Part 28 of 31
DOI: 10.5061/dryad.36n40/1
title: Quattrini_anthozoa_baits_V1

description: Fasta file with the designed baits for anthozoan target-capture enrichment. Potential Symbiodinium loci have been removed.
DOI: 10.5061/dryad.36n40/2
title: Quattrini_etal_25p_final

description: Tree file for Figure 2 in paper
DOI: 10.5061/dryad.36n40/3
title: Quattrini_align

description: .phylip formatted alignment files for 25% and 50% taxon occupancies. Loci are concatenated. Separate files for all loci, uce loci only, and exon (trans) loci only.
DOI: 10.5061/dryad.36n40/4
title: Quattrini_align.insilico

description: .phylip formatted alignment files of 50% taxon occupancies for UCE loci recovered from genome-enabled taxa and exon (trans) loci recovered from the transcriptome-enabled taxa. These alignments were used to generate in silico results presented in Figures 1a and b.
DOI: 10.5061/dryad.36n40/5
title: Quattrini_SupplFile1

description: Text file of scripts used in bait design, in silico, and in vitro analyses.
DOI: 10.5061/dryad.3q26p/3
title: Supplementary table 3

description: Filtered differentially expressed mRNA targets of differentially expressed miRNAs (3 weeks time point)
DOI: 10.5061/dryad.3q26p/4
title: Supplementary table 4

description: Filtered differentially expressed mRNA targets of differentially expressed miRNAs (3 weeks time point)
DOI: 10.5061/dryad.3vh79/2
title: Census level information

description: This file contains the shapefile with the socioeconomic and environmental variables at the census block group level (“SJMA_census_v1.shp”). The shapefile field names and description are provided in the associated readme file.
DOI: 10.5061/dryad.3vh79/3
title: R script

description: “R_Script.rtf” is the R script used for analyzing the relationships between urban vegetation and socioeconomic factors
DOI: 10.5061/dryad.3vh79/4
title: README

description: This file describes the material included in the repository. Please read this file first, and do not hesitate to contact us if you have any questions or comments!
DOI: 10.5061/dryad.5c793/1
title: deer_allData

description: This table contains the roe deer steps associated with habitat variables and temporal variables that were used to build the step selection function (SSF) named the all data model in Gehr et al. 2017 (Ecology and Evolution). The table is divided into used (actual) lynx steps and random steps in a ratio of 1:10 (column "use"). The random steps match to their corresponding location id in the used steps (column “loc_id”). Swisstopo in the column headers refers to the source of the environmental variables. Cover swisstopo is a dummy variable for open/cover. Edge_dist_swisstopo refers to the distance to the closest forest edge. Slope_sq and altitude_sq are the squared slope and altitude variables. Aspect_swisstopoS is the southern exposition. Dist2 refers to the step length. Pred_risk_search refers to the chronic predation risk which was derived from a lynx habitat model for active/searching lynx. The 6 temporal variables are time harmonics of a Fourier transform for time of day (tsin, tcos; period of 24) and day of year (ytsin, ytcos, ytsin2, ytcos2; period of 365). All habitat variables were measured at the end of a step. All continuous variables in this table are mean centered and standardized to a SD=1. For information on the raw data or for R-code used to run the models please contact the data owner.
DOI: 10.5061/dryad.5c793/2
title: deer_nohunting

description: This table contains the roe deer steps associated with habitat variables and temporal variables that were used to build the step selection function (SSF) named the no hunting model in Gehr et al. 2017 – Ecology and Evolution. This table differs from the all data table in that all locations during the 10 week hunting season were removed. The table is divided into used (actual) lynx steps and random steps in a ratio of 1:10 (column "use"). The random steps match to their corresponding location id in the used steps (column “loc_id”). Swisstopo in the column headers refers to the source of the environmental variables. Cover swisstopo is a dummy variable for open/cover. Edge_dist_swisstopo refers to the distance to the closest forest edge. Slope_sq and altitude_sq are the squared slope and altitude variables. Aspect_swisstopoS is the southern exposition. Dist2 refers to the step length. Pred_risk_search refers to the chronic predation risk which was derived from a lynx habitat model for active/searching lynx. The 6 temporal variables are time harmonics of a Fourier transform for time of day (tsin, tcos; period of 24) and day of year (ytsin, ytcos, ytsin2, ytcos2; period of 365). All habitat variables were measured at the end of a step. All continuous variables in this table are mean centered and standardized to a SD=1. For information on the raw data or for R-code used to run the models please contact the data owner.