cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c57p8tr5t
title: MassIVE MSV000096529 - Proteomic analyses of bacterial growth using fungal biomass or fungal cell wall polysaccharides
title: This study was a proteomic and secretomic survey of the Gram-negative saprophytic bacterium Cellvibio japonicus during growth using fungal polysaccharides or authentic fungal biomass as a sole nutrient source. The purified polysaccharides were beta-glucan (derived from yeast) and alpha chitin (derived from shrimp shells). The authentic fungal biomass came from Saccharomyces cerevisiae and Aspergillus nidulans. The proteome and secretome samples were taken during mid-exponential growth in biological triplicate. Bacterial cells were homogenized via probe sonication and reduced and alkylated followed by trypsin digestion using a suspension trap (S-trap). Supernatants were reduced and alkylated and followed by trypsin digestion via MStern Blotting. An SPQC was made by combining equal volumes of each sample for both sample types. After lyophilization and reconstitution, 2 ul of cell digests and 15 ul of supernatant digests were loaded onto Evotips. Quantitative LC/MS/MS was performed using an Evosep One LC coupled to a Thermo Orbitrap Astral via a Nanospray Flex ionization source. Samples were block randomized and interspersed with the SPQC replicates. The Evosep used a 60 sample-per-day method with a Pepsep 8 cm x 150 um column (1.5 um particle size) with a PepSep Sprayer and stainless steel (30 um) emitter. The MS analysis used a 240,000 resolution precursor ion (MS1) scan from 380-980 m/z, AGC target of 500% and maximum injection time (IT) of 50 ms, collected every 0.6 s in centroid mode. MS/MS was performed using a DIA method with default charge state = 3, precursor mass range of 380-980, 10 m/z isolation windows, AGC target of 500% and maximum IT of 20 ms, and a NCE of 28. An RF lens of 40% was used for MS1 and DIA scans. Raw MS data was converted to .htrms format using HTRMS converter and processed in Spectronaut 19 (Biognosys). A spectral library was built using direct-DIA searches of all DIA analyses using a Cellvibrio japonicus database, downloaded from Uniprot on 10/29/2024 and appended contaminant sequences using FragPipeSearch settings included N-terminal trypsin/P specificity up to 2 missed cleavages; peptide length from 7-52 amino acids with the following modifications: acetyl (N-term) and carbamidomethyl(Cys). For DIA analysis, default extraction, calibration, identification, and protein inference settings were used.
DOI: 10.6084/m9.figshare.24849936
title: Raw data of the manuscript Foraging behavior of the ant <i>Ectatomma vizottoi</i>

description: Raw data of nest coordinates, times and distances of foraging, and prey size of the manuscript Foraging behavior of the ant <i>Ectatomma vizottoi</i>
DOI: 10.17632/9727d52thg.1
title: Bean Leaf Disease Detection Database

description: This dataset provides comprehensive information on the detection and identification of fungal pathogens responsible for bean leaf diseases. It includes morphological observations, molecular analyses, and pathogenicity test results conducted on symptomatic bean plants collected from [specific region]. The dataset supports studies in plant pathology, agricultural science, and molecular diagnostics.
DOI: 10.17632/9727d52thg.2
title: Bean Leaf Disease Detection Database

description: This dataset provides comprehensive information on the detection and identification of fungal pathogens responsible for bean leaf diseases. It includes morphological observations, molecular analyses, and pathogenicity test results conducted on symptomatic bean plants collected from [specific region]. The dataset supports studies in plant pathology, agricultural science, and molecular diagnostics.
DOI: 10.17632/z878nn66f7
title: Accesibilidad en Subterráneos de Buenos Aires

description: Nota IF-2024-44220607-GCABA-SBASE sobre la accesibilidad en Subterráneos de Buenos Aires
DOI: 10.17632/z878nn66f7.1
title: Accesibilidad en Subterráneos de Buenos Aires

description: Nota IF-2024-44220607-GCABA-SBASE sobre la accesibilidad en Subterráneos de Buenos Aires
DOI: 10.17632/c2ghc84drm.1
title: Indoor Air Pollution: Causes, Effects, And Solutions

description: Indoor air pollution is a significant yet often overlooked health risk, especially in developing countries. This paper explores the causes, effects, and mitigation strategies of indoor air pollution, focusing on its impact on human health and environmental sustainability. It develops a theoretical and conceptual framework to understand the implications of indoor air pollution within public health and environmental policies. The study highlights the risks associated with home-based cottage industries like agarbatti making, artificial charcoal production, perfume making, toilet chemical making, soap making, Tobacco based product making like Bidi which release harmful chemicals, Volatile organic compounds (VOCs), and fine particulate matter (PM2.5). It emphasizes the need for safety measures such as proper ventilation, PPE, and the adoption of non-toxic practices to protect workers' health and improve indoor air quality.
DOI: 10.17632/vf37hjtk2n.1
title: Computational Experiment Results for the Job Shop Scheduling Problem with Time Lags (JSPTL)

description: This dataset contains the results of computational experiments conducted on benchmark instances of the Job Shop Scheduling Problem with Time Lags (JSPTL). The table compares the performance of different algorithms, including:
 - MA: Memetic Algorithm (Caumond et al., 2008)
 - BB: Branch and Bound (Artigues et al., 2011)
 - SSPR: Shifting Bottleneck Procedure with Simulated Annealing (Gonzalez et al., 2015)
 - HBBO: Hybrid Bee-Based Optimization (Harrabi et al., 2021)
 - This paper: Proposed approach from the current study.
Metrics include:
 - GAP (%): Gap between the solution and the optimal/known best lower bound.
 - t (s): Computational time in seconds.
The dataset is divided into two parts:
 - Instances with small to medium complexity (la01 to la05), with averages provided.
 - Instances with higher complexity (la06 to la08), with corresponding averages.
This data supports the analysis of the efficiency and competitiveness of the proposed method in comparison to state-of-the-art algorithms.
DOI: 10.17632/vf37hjtk2n.2
title: Computational Experiment Results for the Job Shop Scheduling Problem with Time Lags (JSPTL)

description: This dataset contains the results of computational experiments conducted on benchmark instances of the Job Shop Scheduling Problem with Time Lags (JSPTL). The table compares the performance of different algorithms, including:
 - MA: Memetic Algorithm (Caumond et al., 2008)
 - SSPR: Shifting Bottleneck Procedure with Simulated Annealing (Gonzalez et al., 2015)
 - This paper: Proposed approach from the current study.
Metrics include:
 - GAP (%): Gap between the solution and the optimal/known best lower bound.
 - t (s): Computational time in seconds.
The dataset is divided into two parts:
 - Instances with small to medium complexity (la01 to la05), with averages provided.
 - Instances with higher complexity (la06 to la08), with corresponding averages.
This data supports the analysis of the efficiency and competitiveness of the proposed method in comparison to state-of-the-art algorithms.
DOI: 10.17632/yms5hyyfzb.1
title: Analysis of User-Generated Social Media Posts to “X” on the Management of Radiation Dermatitis

description: Supplemental table for article: "Analysis of User-Generated Social Media Posts to “X” on the Management of Radiation Dermatitis".
DOI: 10.17632/sdwxm9y78x.1
title: Warming unsynchronised tree radial growth and regional vegetation canopy growth in semi-arid areas of north-eastern China——a case of Pinus sylvestris var. mongolica in plantation

description: Research data of Warming unsynchronised tree radial growth and regional vegetation canopy growth in semi-arid areas of north-eastern China——a case of Pinus sylvestris var. mongolica in plantation
DOI: 10.17632/3fmh5vy9kr.1
title: Produksi Briket Arang Tempurung Kelapa Sebagai Bahan Bakar Alternatif

description: Ciri khas metode pirolisis meliputi penentuan bahan baku berupa tempurung dari kelapa varietas dalam, bahan perekat berupa tepung sisa pengolahan ubi kayu, bahan bakar berupa serbuk gergaji, sabut kelapa dan sisa-sisa pemotongan kayu, produksi briket berupa rasio arang dengan perekat 9:1, model briket berbentuk silinder dengan massa 100 gram dan beban penekan pencentak 2 ton. Sehingga, secara keseluruhan proses dilakukan dengan melibatkan limbah dan produksi arang dilakukan dengan tidak mengontakkan langsung tempurung dengan sumber api yang menyebabkan konversi produk briket dari tempurung mencapai 75% dengan nilai kalori briket dapat mencapai 7.000 kalori/g, kandungan abu dan air dibawah 2%, senyawa yang mudah menguap dibawah 9%, karbon aktif diatas 70% dan kandungan sulfur yang sangat kecil, sehingga pemanfaatannya tidak hanya sebagai bahan bakar pada industri rumah tangga, tetapi juga industri besar seperti industri pembangkit listrik tenaga uap (PLTU), dan industri pemurnian logam.
DOI: 10.17632/xrj7rhzxhb.1
title: Regulating inattention in fee-based financial advice
DOI: 10.5284/1124493
title: Images from a Trial Trench Evaluation at Nursery Bungalow, West Street, Buckingham, 2015-2016

description: This collection comprises of site records and photographs from a trial trench evaluation carried out by MOLA Northampton at Nursery Bungalow, West Street, Buckingham between 2015 and 2016.
DOI: 10.5517/ccdc.csd.cc2jxhxw
title: CCDC 2351099: Experimental Crystal Structure Determination

description: Related Article: Xujun Qiu, Eric Pohl, André Jung, Qianyu Cai, Haopu Su, Olaf Fuhr, Ute Schepers, Stefan Bräse|2024|Chem.Commun.|60|12856|doi:10.1039/D4CC03907F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2jxhyx
title: CCDC 2351100: Experimental Crystal Structure Determination

description: Related Article: Xujun Qiu, Eric Pohl, André Jung, Qianyu Cai, Haopu Su, Olaf Fuhr, Ute Schepers, Stefan Bräse|2024|Chem.Commun.|60|12856|doi:10.1039/D4CC03907F
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kdmxj
title: CCDC 2365638: Experimental Crystal Structure Determination

description: Related Article: Imogen Squire, Michelangelo Tritto, Juliana Morell, Clare Bakewell|2024|Chem.Commun.|60|12908|doi:10.1039/D4CC03904A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2kdmvg
title: CCDC 2365636: Experimental Crystal Structure Determination

description: Related Article: Imogen Squire, Michelangelo Tritto, Juliana Morell, Clare Bakewell|2024|Chem.Commun.|60|12908|doi:10.1039/D4CC03904A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ksj41
title: CCDC 2377053: Experimental Crystal Structure Determination

description: Related Article: Xujun Qiu, Qianyu Cai, Eric Pohl, André Jung, Haopu Su, Olaf Fuhr, Ute Schepers, Stefan Bräse|2024|Chem.Commun.|60|12852|doi:10.1039/D4CC04209C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ksj52
title: CCDC 2377054: Experimental Crystal Structure Determination

description: Related Article: Xujun Qiu, Qianyu Cai, Eric Pohl, André Jung, Haopu Su, Olaf Fuhr, Ute Schepers, Stefan Bräse|2024|Chem.Commun.|60|12852|doi:10.1039/D4CC04209C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ksj63
title: CCDC 2377055: Experimental Crystal Structure Determination

description: Related Article: Xujun Qiu, Qianyu Cai, Eric Pohl, André Jung, Haopu Su, Olaf Fuhr, Ute Schepers, Stefan Bräse|2024|Chem.Commun.|60|12852|doi:10.1039/D4CC04209C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ksmww
title: CCDC 2377169: Experimental Crystal Structure Determination

description: Related Article: Mei-Zhu Bao, Xiao-Ying Pan, Wen-Rong Wu, Lin Xiao, Jidan Liu, Xu-Ge Liu, Shang-Shi Zhang, Limin Zhao|2024|Chem.Commun.|60|12928|doi:10.1039/D4CC04309J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.14224592
title: Electron beam-splitting effect with crossed zigzag graphene nanoribbons in high-spin metallic states

description: OPEN DATA related to the research publication:

 

Sofia Sanz, Géza Giedke, Daniel Sánchez-Portal, Thomas Frederiksen,

Electron beam-splitting effect with crossed zigzag graphene nanoribbons in high-spin metallic states

 [arXiv:2408.08787]

ABSTRACT: Here we analyze the electron transport properties of a device formed of two crossed graphene nanoribbons with zigzag edges (ZGNRs) in a spin state with total magnetization different from zero. While the ground state of ZGNRs has been shown to display antiferromagnetic ordering between the electrons at the edges, for wide ZGNRs--where the localized spin states at the edges are decoupled and the exchange interaction is close to zero--, in presence of relatively small magnetic fields, the ferromagnetic (FM) spin configuration can in fact become the state of lowest energy due to the Zeeman effect. In these terms, by comparing the total energy of a periodic ZGNR as a function of the magnetization per unit cell we obtain the FM-like solution of lowest energy for the perfect ribbon, the corresponding FM-like configuration of lowest energy for the four-terminal device formed of crossed ZGNRs, and the critical magnetic field needed to excite the system to this spin configuration. By performing transport calculations, we analyze the role of the distance between layers and the crossing angle of this device in the electrical conductance, at small gate voltages. The problem is approached employing the mean-field Hubbard Hamiltonian in combination with non-equilibrium Green's functions. We find that ZGNR devices subject to transverse magnetic fields may acquire a high-spin configuration that ensures a metallic response and tunable beam splitting properties, making this setting promising for studying electron quantum optics with single-electron excitations.
DOI: 10.5281/zenodo.14224593
title: Electron beam-splitting effect with crossed zigzag graphene nanoribbons in high-spin metallic states

description: OPEN DATA related to the research publication:

 

Sofia Sanz, Géza Giedke, Daniel Sánchez-Portal, Thomas Frederiksen,

Electron beam-splitting effect with crossed zigzag graphene nanoribbons in high-spin metallic states

 [arXiv:2408.08787]

ABSTRACT: Here we analyze the electron transport properties of a device formed of two crossed graphene nanoribbons with zigzag edges (ZGNRs) in a spin state with total magnetization different from zero. While the ground state of ZGNRs has been shown to display antiferromagnetic ordering between the electrons at the edges, for wide ZGNRs--where the localized spin states at the edges are decoupled and the exchange interaction is close to zero--, in presence of relatively small magnetic fields, the ferromagnetic (FM) spin configuration can in fact become the state of lowest energy due to the Zeeman effect. In these terms, by comparing the total energy of a periodic ZGNR as a function of the magnetization per unit cell we obtain the FM-like solution of lowest energy for the perfect ribbon, the corresponding FM-like configuration of lowest energy for the four-terminal device formed of crossed ZGNRs, and the critical magnetic field needed to excite the system to this spin configuration. By performing transport calculations, we analyze the role of the distance between layers and the crossing angle of this device in the electrical conductance, at small gate voltages. The problem is approached employing the mean-field Hubbard Hamiltonian in combination with non-equilibrium Green's functions. We find that ZGNR devices subject to transverse magnetic fields may acquire a high-spin configuration that ensures a metallic response and tunable beam splitting properties, making this setting promising for studying electron quantum optics with single-electron excitations.
DOI: 10.5281/zenodo.14162597
title: Systematic review and meta-analysis of the occurrence of Listeria monocytogenes in fresh produce in selected developing countries

description: This dataset contain the supplementary data for "Systematic review and meta-analysis of the occurrence of Listeria monocytogenes in fresh produce in selected developing countries"
DOI: 10.5281/zenodo.14162598
title: Systematic review and meta-analysis of the occurrence of Listeria monocytogenes in fresh produce in selected developing countries

description: This dataset contain the supplementary data for "Systematic review and meta-analysis of the occurrence of Listeria monocytogenes in fresh produce in selected developing countries"
DOI: 10.5281/zenodo.14224887
title: Systematic review and meta-analysis of the occurrence of Listeria monocytogenes in fresh produce in selected developing countries

description: This dataset contain the supplementary data for "Systematic review and meta-analysis of the occurrence of Listeria monocytogenes in fresh produce in selected developing countries"
DOI: 10.5281/zenodo.14224923
title: Systematic review and meta-analysis of the occurrence of Listeria monocytogenes in fresh produce in selected developing countries

description: This dataset contain the supplementary data for "Systematic review and meta-analysis of the occurrence of Listeria monocytogenes in fresh produce in selected developing countries"
DOI: 10.5284/1124494
title: Images and Site Records from a Building Survey at Oxford Pembroke College, Oxford, 2018-2019

description: This collection comprises of site records and photographs from a building survey carried out by Oxford Archaeology (South) at Oxford Pembroke College, Oxford between 2018 and 2019.
DOI: 10.5281/zenodo.14224919
title: FedShop200 in Blazegraph

description: Fedshop is a benchmark for SPARQL federation queries. While originally stored in Virtuoso, this was ingested using Blazegraph.This dataset aims to emulate 200 endpoints with a single one, where each graph stores the dataset of an endpoint.The dataset is not compressed since it's already of small size.
DOI: 10.5281/zenodo.14224920
title: FedShop200 in Blazegraph

description: Fedshop is a benchmark for SPARQL federation queries. While originally stored in Virtuoso, this was ingested using Blazegraph.This dataset aims to emulate 200 endpoints with a single one, where each graph stores the dataset of an endpoint.The dataset is not compressed since it's already of small size.
DOI: 10.25500/edata.bham.00001201
title: Data to support "Infrared photoactivation enables nano-DESI MS of protein complexes in tissue on a linear ion trap mass spectrometer"

description: Raw datafiles from the linear ion trap were recalibrated with respect to signals in orbitrap mass spectra using Mmass.
DOI: 10.25921/mfhk-sc08
title: Audio files recorded at US Navy Undersea Warfare Training Ranges (USWTR) sites
DOI: 10.5281/zenodo.14222861
title: Q-sort data

description: This dataset contains the Q-sorts of participants from Morocco, Spain and Tunisia, as part of the ConServeTerra project. The first row contains ids separated by country (M for Morocco, S for Spain, T for Tunisia).

These sorts were analysed with the 'qmethod' package for R, within the user interface found here: https://azabala.shinyapps.io/qmethod-gui/ 

The number of factors extracted was 3 and a varimax rotation was used.
DOI: 10.5281/zenodo.14222862
title: Q-sort data

description: This dataset contains the Q-sorts of participants from Morocco, Spain and Tunisia, as part of the ConServeTerra project. The first row contains ids separated by country (M for Morocco, S for Spain, T for Tunisia).

These sorts were analysed with the 'qmethod' package for R, within the user interface found here: https://azabala.shinyapps.io/qmethod-gui/ 

The number of factors extracted was 3 and a varimax rotation was used.
DOI: 10.5281/zenodo.14190774
title: Preprocessed data for single-cell analysis of cell competition in mouse development

description: Contains different processed files for the 3 datasets in different folders. Files with "cls" was used for classification and contains labels for winner and loser status as well as whether used for training and testing.

The independent files used for analysis are stored in the folders containing "ind" in the folder name. "ind_labelled" contains predicted labels for the independent datasets.
DOI: 10.5281/zenodo.14190775
title: Preprocessed data for single-cell analysis of cell competition in mouse development

description: Contains different processed files for the 3 datasets in different folders. Files with "cls" was used for classification and contains labels for winner and loser status as well as whether used for training and testing.

The independent files used for analysis are stored in the folders containing "ind" in the folder name. "ind_labelled" contains predicted labels for the independent datasets.