cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/1t34w-qrf21
title: Legionella IcmQ71::TevS 42C_On

description: Legionella IcmQ71::TevS 42C_On (HS004 E)
description: <strong>Tilt Series Date:</strong> 2019-05-31</p>
<strong>Data Taken By:</strong> Debnath Ghosal</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-51.0°, 51.0°), step: 3.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -6.0 μm,  magnification: 42000x. </p>
<strong>Microscope:</strong> Janelia Titan</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain sent to us by Howard Shuman (University of Chicago). Data collected by Debnath Ghosal and Yuxi Liu.</p>
<strong>Sample Preparation:</strong> Vitrobot (MK iv) settings: 100% humidity, 4µl sample, Blot force 6, blot time 3 sec. Wait time 0 sec. Drain time 1 sec. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200. Add gold to cells prior to freezing: 1ul of gold to 4 ul of cells, freeze.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-31-71/rawdata/</p>HS004E-area9-tomo0004.mrc,  Tilt Series (Pixel Size 0.26 nm), 996.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-31-71/rawdata/HS004E-area9-tomo0004.mrc"
        > <i class="download icon"></i> Download </a></p>

        HS004E-area9-tomo0004_full.rec,  Reconstruction (Pixel Size 1.04 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/dga2019-05-31-71/3dimage_103776/HS004E-area9-tomo0004_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/azs6a-b7a16
title: JV9298

description: Legionella pneumophila JV9298 DotF-GFP DotB E191K
description: <strong>Tilt Series Date:</strong> 2020-04-23</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Legionella pneumophila</p>
<strong>Strain:</strong> Philadelphia-1_Lp02</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 3°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -4.0 μm,  magnification: 33000x. </p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod, tomo3d</p>
<strong>Collaborators and Roles:</strong> Sample preparation & data collection: Yuxi Liu Data processing: Phyllis Wang & Yuxi Liu</p>
<strong>Purification / Growth Conditions / Treatment:</strong> O.D. 2.5-3.0 in AYE</p>
<strong>Sample Preparation:</strong> Quantifoil R2/2 copper grid, 10nm gold, 100% humidity, 25deg C, 4uL of 2X concentrated cells Blotting: force 6, blot 3sec, wait 1sec</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2020-04-23-199/3dimage_124073/</p>JV9298_PD-1-3_073_SIRT_1k.mrc,  Reconstruction (Pixel Size 1.04 nm), 2.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2020-04-23-199/3dimage_124073/JV9298_PD-1-3_073_SIRT_1k.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9298_PD-1-3_073.mrc,  Tilt Series (Pixel Size 0.26 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2020-04-23-199/rawdata/JV9298_PD-1-3_073.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/3vxby-33z96
title: B. diazoefficiens, hopanoids

description: WT strain, log phase
description: <strong>Tilt Series Date:</strong> 2019-11-06</p>
<strong>Data Taken By:</strong> Yuxi Liu</p>
<strong>Species / Specimen:</strong> Bradyrhizobium diazoefficiens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -6.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Brittany Belin (Newman Lab, CalTech): strain construction, culture growth</p>
<strong>Purification / Growth Conditions / Treatment:</strong> log phase, treated with naringenin</p>
<strong>Sample Preparation:</strong> Broad vitrobot 22 degC, 100% humidity, manual back blotting. 4uL of 5X diluted cell (original O.D. 0.8). Quantifol copper R2/2 finder grid </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-11-06-36/rawdata/</p>WT_LG_64step2_23.mrc,  Tilt Series (Pixel Size 2.678 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-11-06-36/rawdata/WT_LG_64step2_23.mrc"
        > <i class="download icon"></i> Download </a></p>

        WT_LG_64step2_23.rec,  Reconstruction (Pixel Size 10.712 nm), 2.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ylx2019-11-06-36/3dimage_108293/WT_LG_64step2_23.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/c64aq-2qp37
title: Caulobacter crescentus

description: Raw data files of Caulobacter crescentus
description: <strong>Tilt Series Date:</strong> 2018-07-14</p>
<strong>Data Taken By:</strong> Lujia Zhang</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> For the research of pilus, WT</p>
<strong>Purification / Growth Conditions / Treatment:</strong> swarmer cell, PVP</p>
<strong>Sample Preparation:</strong> force 4, time 6, humidity 100%, temp. 22</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-07-14-37/rawdata/</p>targ14.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-07-14-37/rawdata/targ14.mrc"
        > <i class="download icon"></i> Download </a></p>

        targ14_part124_2.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-07-14-37/3dimage_100264/targ14_part124_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/a35bm-s2293
title: P. gingivalis ABK mutant

description: Triple gingipain ABK mutant in the P. gingivalis W50 strain
description: <strong>Tilt Series Date:</strong> 2018-01-15</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Species / Specimen:</strong> Porphyromonas gingivalis</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Reynolds</p>
<strong>Sample Preparation:</strong> Harvested and plunge-frozen from liquid culture.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-48/rawdata/</p>Pgin_102.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-48/rawdata/Pgin_102.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pgin_102_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-01-15-48/3dimage_91780/Pgin_102_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/66jye-hv888
title: Caulobacter crescentus

description: Raw data files of Caulobacter crescentus
description: <strong>Tilt Series Date:</strong> 2018-09-11</p>
<strong>Data Taken By:</strong> Lujia Zhang</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> For the research of pilus, WT</p>
<strong>Purification / Growth Conditions / Treatment:</strong> swarmer cell, PVP</p>
<strong>Sample Preparation:</strong> force 4, time 6, humidity 100%, temp. 22</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-09-11-37/rawdata/</p>targ30.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-09-11-37/rawdata/targ30.mrc"
        > <i class="download icon"></i> Download </a></p>

        targ30_part111_2.rec,  Reconstruction (Pixel Size 1.56 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/lza2018-09-11-37/3dimage_100479/targ30_part111_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/vje3v-f2q41
title: Pseudomonas aeruginosa

description: Raw data files of Pseudomonas aeruginosa
description: <strong>Tilt Series Date:</strong> 2018-12-21</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Pseudomonas aeruginosa</p>
<strong>Strain:</strong> PA14 flgI::MrT7 (Tn)</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 50.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> These cells were obtained from Diana Newman lab (cells given by the lab manager Shannon Park) from the transposon library. This is number (4658) from the non-redundant list (FLgI mutant).</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-24/rawdata/</p>Pseudomonas_dflgI29.mrc,  Tilt Series (Pixel Size 0.53 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-24/rawdata/Pseudomonas_dflgI29.mrc"
        > <i class="download icon"></i> Download </a></p>

        Pseudomonas_dflgI29_full.rec,  Reconstruction (Pixel Size 2.12 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-21-24/3dimage_99853/Pseudomonas_dflgI29_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/gatjk-car40
title: Ecoli+Elastin

description: Raw data files of Ecoli+Elastin
description: <strong>Tilt Series Date:</strong> 2018-10-15</p>
<strong>Data Taken By:</strong> Songye Chen</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Seunghyun Sim from Tirrell Lab provided the sample</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2018-10-15-7/rawdata/</p>6N_tilt7.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2018-10-15-7/rawdata/6N_tilt7.mrc"
        > <i class="download icon"></i> Download </a></p>

        6N_tilt7_full.rec,  Reconstruction (Pixel Size 1.56 nm), 444.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scy2018-10-15-7/3dimage_97601/6N_tilt7_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/ddwex-93819
title: U2OS-periphery

description: Raw data files of U2OS-periphery
description: <strong>Tilt Series Date:</strong> 2018-07-27</p>
<strong>Data Taken By:</strong> Wei Zhao</p>
<strong>Species / Specimen:</strong> U2OS</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -8.0 μm,  magnification: 33000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Sample Preparation:</strong> Cells grown on Au finder grids.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2018-07-27-5/rawdata/</p>ts7.mrc,  Tilt Series (Pixel Size 0.439 nm), 2.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2018-07-27-5/rawdata/ts7.mrc"
        > <i class="download icon"></i> Download </a></p>

        ts7_bin2.rec,  Reconstruction (Pixel Size 0.0 nm), 270.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/wza2018-07-27-5/3dimage_93957/ts7_bin2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.snwvvp
title: Occurrence Download

description: A dataset containing 344585 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Crepis capillaris"
 ]
}

 The dataset includes 344585 records from 1783 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001860-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3aspwp
title: Occurrence Download

description: A dataset containing 243 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Quercus ilex",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 243 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000046-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e4qczg
title: Occurrence Download

description: A dataset containing 130 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Jaguajir rochae (Borelli, 1910)"
 ]
}

 The dataset includes 130 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022851-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.axgn3q
title: Occurrence Download

description: A dataset containing 1253 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-4.52683 36.64711,-4.42916 36.64711,-4.42916 36.70221,-4.52683 36.70221,-4.52683 36.64711))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 1253 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022852-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15602860
title: Evaluation of SWOT Wide-Swath Products in the Chesapeake Bay - A First Comparison with Sentinel-3A, Sentinel-6MF and Tide-Gauges [Sentinel-6MF TERPSAR]

description: Sentinel-6MF TERPSAR Product used in the study Evaluation of SWOT Wide-Swath Products in the Chesapeake Bay - A First Comparison with Sentinel-3A, Sentinel-6MF and Tide-Gauges. All variables sampled at 20 Hz frequency. This version addressed issues with correction data present in the previous version. Please refer to this version of the dataset for reference.
DOI: 10.15468/dl.5e5vvx
title: Occurrence Download

description: A dataset containing 114862746 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 114862746 records from 8132 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022812-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wx2kfu
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Burmeistera pterifolia A.F.Vallejo, Á.J.Pérez & Muchhala"
 ]
}

 The dataset includes 24 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022662-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5524/102439
title: Supporting data for "Spatial patterns associated with the distribution of immature stages of <i>Aedes aegypti</i> in three high-risk dengue municipalities of Southwestern Colombia"

description: <i>Aedes aegypti</i> mosquitoes are the main vector of human arbovirosis in tropical and subtropical areas. Its adaptation to urban and rural environments generates infestations inside households. Therefore, entomological surveillance in association with spatio-temporal analysis is an innovative approach to vector control and dengue management. The main aim was to inspect immature pupal stages in households belonging to municipalities at high risk of dengue, implementing entomological indices and relating how they influence adult mosquito density. Here, we provide novel data for the geographical distribution of 3,806 immature pupal stages of <i>Ae. aegypti</i><em>.</em> We also report entomological indices and spatial characterization. The results suggest that for <i>Ae. aegypti</i> species, pupal productivity generates high densities of adults in neighbouring households, evidencing seasonal behaviour. This dataset is of great importance as it provides an innovative strategy for vector-borne disease mitigation using vector spatial patterns and their association with entomological indicators and breeding sites in high-risk neighbourhoods.
DOI: 10.15468/dl.fmwvbc
title: Occurrence Download

description: A dataset containing 5635 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Fistulifera saprophila (Lange-Bertalot & Bonik) Lange-Bertalot, 1997"
 ]
}

 The dataset includes 5635 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022661-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17882/105148
title: Storm tracks based on wave heights from LOPS WAVEWATCH III hindcast and ERA5 reanalysis, years 1991-2024

description: These storm tracks were obtained from tracking the maxima of significant wave heights. The method was adapted from storm tracking methods that typically use sea level pressure.
DOI: 10.17882/105375
title: Phytoplankton functional trait database from "Long-term monitoring data shed light on in situ feeding preferences in bivalves: a taxonomic and trait-based approach to phytoplankton"

description: We built a trait database of 385 phytoplankton taxa recorded in five Atlantic bays in France between 2009 and 2018. We focused on seven traits known or potentially expected to be determinant for bivalve molluscs nutrition, including morphological traits such as maximum cell size, shape and cover (i.e. cell wall structure), the ability to form colonies, presence of spicules, ecological (habitat) and physiological (harmfulness) traits. The database published by Ramond et al. (2019 - doi.org/10.17882/51662) served as the starting point for traits related to cell size, cell cover, colony building and spicules. Other traits and final missing information were completed with a systematic review of the literature, the references of which are given in the database. This literature research was carried out starting with sites located in France and then moving further afield in Europe and the rest of the world depending on the information available. With the exception of harmfulness, we used the following specific rules to define the traits of taxa identified at taxonomic ranks above the species: (i) the traits of the most abundant species in the dataset were assigned to the corresponding genus (in the rare cases where no species were identified, the assigned traits were those of the species/genus observed elsewhere in France or the most abundant species/genus in the same family), (ii) the traits of the most abundant genera were assigned to the corresponding family, (iii) the traits of a virtual taxon (i.e. a group of taxa with similar morphologies) were those of its most abundant member. The table (.xlsx format) comprises three spreadsheets: i) a main database with trait values for all phytoplankton taxa and associated references, and details of the references used for ii) cell shape, harmfulness and ecological habitat and iii) the other traits.
DOI: 10.17882/105378
title: A database of "very high" and "phenomenal" sea states from the ESA Seastate CCI V4 database, with complements from CNES CFOSAT and SWOT nadir altimeters. Version 1 (not inter-calibrated)

description: This dataset contains all satellite altimeter wave heights above 9 m, from the following satellite missions: ERS-1, ERS-2, Topex-Poseidon (Topex only), Envisat, SARAL, Jason-1, Jason-2, Jason-3, Sentinel-3A, Sentinel-3B, Sentinel-6A, Cryosat-2, CFOSAT, SWOT. Storm event identification used the DetectHsStorm package developed by M. De Carlo and F. Ardhuin (  https://github.com/ardhuin/) . This data can be combined with modeled storm tracks (see F. Ardhuin, M. De Carlo, Storm tracks based on wave heights from LOPS WAVEWATCH III hindcast and ERA5 reanalysis, years 1991-2024, SEANOE (2025). doi: 10.17882/105148 )