DOI: 10.5281/zenodo.15796145
title: Data from: Transgenerational transmission of an environmental modification in quails

description: While epigenetic variations can contribute to shaping phenotypic diversity, it can be challenging to isolate and quantify the portion of trait variability under epigenetic influence. We compared the phenotypic response of two epilines of Japanese quails (Coturnix japonica), with similar genetic structure across three generations following an initial genistein ingestion in the ancestors’ diet. Measured phenotypes included body weight at various ages, egg production traits, tissue weight and behavioural traits.
description: animalId             animal unique identifier

sex                       sex (1 male / 2 female)

birthDate           birth date (YY-MM-DD)

batch                  batch

refDate               death date (YY-MM-DD)

line                      epiline (EPIP = epi+, EPIM = epi-, PM = founder population)

age                      age at slaughter (days)

isoTrial  trial number of the behavioral (isolation) test 

isoDate               date of the behavioral (isolation) test

isoComment      comment on behavioral (isolation) test

repro                  reproductive status (0 = no / 1 = yes)

pop                     generation

family                 family

sireId                   father ID

damId                 mother ID

sireLine              father epiline 

damLine             mother epiline

firstEggDate       date of first laying

LPeriod               length of the observed laying period (days)

lastEggDate       end of the observed laying period

bw_1w               body weight at 1 week (g)

bw_4w               body weight at 4 weeks (g)

bw_7w               body weight at 7 weeks (g)

bw_sl                  body weight at slaughter (g)

heartWeight      heart weight (g)

livrWeight          liver weight (g)

adipWeight        adipose tissue weight (g)

testisWeight      testis weight (g)

precocity            age at first egg

eggNb                 number of eggs laid during the observed laying period

LR                        laying rate (= eggNb / LPeriod)

totalDist             total distance covered by the quail during the isolation test (cm)

centreDuration time spent in the inner area (s)

periphFreq         frequency of time spent at the periphery

adj_heartW       adjusted heart weight (= heartWeight / bw_sl)

adj_livrW           adjusted liver weight (= livrWeight / bw_sl)

adj_adipW         adjusted adipose tissue weight (= adipWeight / bw_sl)

adj_testisW       adjusted testis weight (= testisWeight / bw_sl)

EW                      egg weight

adj_EW               adjusted egg weight (= EW / bw_sl)

bw_7w_trans    normalized bw_7w (transformation= sqrt) 

bw_sl_trans      normalized bw_7w (transformation= sqrt) 

precocity_trans normalized bw_7w (transformation= 1/x) 

totalDist_trans normalized bw_7w (transformation= sqrt) 

centreDuration_trans   normalized bw_7w (transformation= sqrt) 

adj_heartW_trans         normalized bw_7w (transformation= log10) 

adj_livrW_trans             normalized bw_7w (transformation= sqrt) 

adj_EW_trans   normalized bw_7w (transformation= sqrt) 

periphFreq_trans           normalized bw_7w (transformation= sqrt) 

adj_adipW_trans           normalized bw_7w (transformation= sqrt)