cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23590426.v1
title: Additional file 1 of ExplaiNN: interpretable and transparent neural networks for genomics

description: Additional file 1. TF binding modes used in this study.
DOI: 10.6084/m9.figshare.26112745.v1
title: Genome annotation of <i>Plecia longiforceps</i>

description: Gene annotation of the de novo genome assembly of <i>Plecia longiforceps. </i>Genes were predicted using the MAKER v3.01.04 pipeline (Campbell et al. 2014).
DOI: 10.6084/m9.figshare.24131970.v2
title: Data of A dynamic obstacle avoidance method for collaborative robots based on trajectory optimization

description: 一种基于轨迹优化的协作机器人动态避障方法数据.
DOI: 10.21233/xxnm-v581
title: RUBM12 pollen surface sample dataset

description: Raw data for the RUBM12 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17632/5nz98k8c97
title: Exploring the Impact of Internship Experiences on Job-Seeking Anxiety Among Undergraduate Students Majoring in Product Design

description: Exploring the Impact of Internship Experiences on Job-Seeking Anxiety Among Undergraduate Students Majoring in Product Design
DOI: 10.17632/gnn6ydpywx
title: Data for: Silicate-sulphide liquid immiscibility in modern arc basalt (Tolbachik volcano, Kamchatka): Part III. Insights from sulphur and boron isotopes

description: Chemical composition of olivine-hosted melt inclusions
DOI: 10.17632/s7jpghsjmj
title: Enablers and Barriers of Digital Transformation: Dataset for Regional Research

description: The dataset includes statistics on the industrial performance and the level of social well-being in the 82 regions of Russia.
DOI: 10.6084/m9.figshare.22967726.v1
title: Grain Size of Wax Lake Delta Island Cores

description: Data are grain size measurements collected from cores taken along cross sections of an island on Wax Lake Delta, LA during the summer of 2015. Sediment samples were taken from cores at constant depth invervals.Grain size was processed after sediment samples were treated with H2O2 to remove organic matter. Grain size distributions were measured using laser grain diffration instrument (Mastersizer).
DOI: 10.17632/8xmms9dp52
title: Data for: Greek-Cypriot learners’ perception and production of L2 English vowels

description: Vowel duration, formant values and intelligibility ratings
DOI: 10.17632/x823sh86zy
title: Does household risk attitude affect consumption expenditure? Evidence from Chinese urban households

description: This is the replication files for the paper entitled "Does household risk attitude affect consumption expenditure? Evidence from Chinese urban households".
DOI: 10.17632/yxbftwjx57
title: Corporate Governance in Russia

description: The dataset contains information about the board of directors of Russian companies, as well as compliance with the requirements of the corporate governance code from the Bank of Russia. The sample contains 33 companies.
DOI: 10.17632/9hmz589r7g
title: Utilising CoDA methods for the spatio-temporal geochemical characterisation of groundwater; a case study from Lisheen Mine, south central Ireland (Datasets and Supplementary Materials).

description: This data was used as part of a case study that examines the use of Compositional Data Analysis (CoDA) for spatio-temporal geochemical characterisation. The primary data file (GroundwaterGeochemistryData.csv) describes the results of geochemical analysis of groundwater from 8 wells over a 12 month period in the area of Lisheen Mine, south-central Ireland. The subsequent data treatment process (R_CodeForDataTreatment.R) allows for the original dataset to be compatible with CoDA.
DOI: 10.17632/c642d2xzf8
title: Supplementary Tables

description: Supplementary Table 1 X-ray intensities at the two flank positions (i.e., Lα and Lβ) of 8 references glasses with known FeOt and Fe2+/ΣFe ratio
Supplementary Table 2 Fe oxidation state and chemical composition of impact glasses in CE-6 samples
DOI: 10.17632/m7c4fg4s23
title: Records of subantarctic fur seals (Arctocephalus tropicalis) in beach surveys carried out by MUCIN/CECLIMAR/UFRGS, between 2012 – 2023, in Southern Brazil.

description: This dataset brings together 27 records of subantarctic fur seals (Arctocephalus tropicalis) from beach surveys carried out by the MUCIN/CECLIMAR/UFRGS research team, between 2012 – 2023, and citizen science records from FAUNA MARINHA RS project, between 2011 - 2023, on the coast of Rio Grande do Sul, Southern Brazil.
DOI: 10.17632/r55dwty7wk
title: Wood residues potential availability per municipality

description: The planted eucalyptus yield was calculated based on the average productivity of each municipality multiplied by the area of planted eucalyptus in each municipality in 2018. For residues potential, it was assumed a rate of 0.167 t(residue)/m³(eucalyptus) over the potential annual production. Finally, it was considered that 50% of this total amount would be collected from field. It is important to notice that the data was spatialized accordingly to the municipalities boundaries, it does not imply that bigger municipalities have a greater availability. For further information see the platform SAFmaps.
DOI: 10.21233/z40c-m810
title: RUBM13 pollen surface sample dataset

description: Raw data for the RUBM13 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17632/8fzkfn488p
title: Dairy cows' motivation to nurse their calves dataset

description: For seven weeks, dairy cows were housed with their calf on either full-time (full; 23 h/d, 28 pairs) or part-time (part, 10 h/d, 27 pairs). Additionally, 26 cow-calf pairs were used as a control treatment, and had no contact. Over two weeks, week 8 and 9, half of the contact pairs (full and part) experienced reduced contact (RC), to first approx. 50% of original contact (9.5 h for full, 4.5 h for part) and then approx. 25% of original contact (4.5 h for full, 2 h for part). The other half continued with unchanged contact (UC).
The cows' motivation to nurse their calf during week 8 and 9 was tested in a maximum price paid (MPP) test, where cows had to pass through an increasingly heavier gate for the opportunity to nurse their calf. The weight on the gate increased by 1.0 bar at a time to a maximum test resistance at 8.0 bar. Cows were interpreted as having reached their MPP when they failed to pass the gate two days in a row. As an alternative, the cows could pass a gate to obtain partial contact (PC), or they could remain in the start box of the arena, obtaining no contact (NC). The gate leading to PC remained at a low resistance throughout the testing.
We hypothesised that cows with reduced contact would express reduced motivation to nurse their calves, and thus have lower MPP than cows with unchanged contact. We also expected that motivation would affect the trainability of the cows, meaning that RC cows would be more likely to fail training than UC cows. Cows' latency to pass the gate was recorded, and it was recorded whether the calf suckled during the test or not. Additionally, we hypothesised that cows would utilise the option of partial contact, when the weight on the gate leading to nursing surpassed their maximum price. This was recorded for cows with two consecutive fails. Furthermore, it was recorded whether cows had attempted to reach their own calf before they failed.
Contrary to our hypothesis, cows with RC had higher MPPs than cows with UC (significantly for full, numerically for part). Full UC cows had similar MPP as no-contact cows. RC calves were more likely to suckle. Fewer no-contact cows than any of the other treatments passed training. We found no indications of preference between PC and NC for the cows' first fail, but cows were more likely to chose NC in the second fail. No relationship was found between cows attempting to reach the nursing opportunity and what alternative they eventually chose.
MPP was analysed using Cox' proportional hazards mixed effects models, trainability and the relationship between trying own calf and chosen alternative were analysed using pairwise Fisher's exact tests, likelihood of nursing was analysed using Chi^2, and choice of alternative was analysed using binomial tests. Latency was only descriptively analysed.
DOI: 10.17632/p8635n3x3t
title: Y-Maze Data

description: Raw data files for y-maze trials with bumble bees (Bombus impatiens) as presented in Bryan and Prager 2023
DOI: 10.17632/yzr5wbnkmm
title: Assessing the Contemporary Status of Nebraska’s Eastern Saline Wetlands by Using a Machine Learning Algorithm on the Google Earth Engine Cloud Computing Platform

description: A readme file shows the code and example link to GEE.
DOI: 10.17632/cnybskpy66
title: Data for: Exploration and Delegation in Risky Choices

description: A RMarkdown file with a fully replicable analysis of main results in the paper. The file contains the raw data in .csv format.
DOI: 10.17632/zf68kt7x34
title: Supporting information for "Deciphering contribution of recycled altered oceanic crust to arc magmas using Ba-Sr-Nd isotopes"

description: 1. Supplementary tables: Tables S1-S2
2. Supplementary figures: Figures S1-S4
3. Supplementary dataset containing the global arc volcano averages and raw arc data
DOI: 10.6084/m9.figshare.24572950.v1
title: Dataset of phytoplankton primary productivity, FRRf, Chl-a in the Changjiang estuary, East China Sea-v2.xlsx

description: The file contains surface primary production rate, temperature, salinity, nutrients, Chla, FRRf data in ECS during summertime of 2019 and 2021. (version2)
DOI: 10.6084/m9.figshare.7890512.v1
title: gVCF_HG03048

description: 1000 Genomes gVCF mapped to hs37d5 for HG03048. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.17632/5kz38zxx6h
title: Data of Virtual Reality Acceptance in Tourism Planning and Marketing

description: This study investigates VR's evolving role in tourism marketing, addressing gaps in existing literature regarding its psychological impact, demographic variations, and complex relationships affecting adoption. The research utilizes a robust quantitative approach combining statistical analysis and Grey System Theory (GST) to examine VR's influence on tourism marketing strategies and traveler decision-making. Online survey data from 87 participants familiar with VR is analyzed through techniques including ANOVA, regression modeling, and Dynamic Grey Relational Analysis (DGRA) to derive actionable insights.
DOI: 10.17632/s2s83c26h5
title: Data for: Plate bending of a buoyant oceanic lithosphere seaward of the Peruvian Trench

description: Fexural modeling along the Peruvian trench-outer rise region including the swell topography of the Nazca Ridge
DOI: 10.21233/aq7d-sf33
title: RUBM14 pollen surface sample dataset

description: Raw data for the RUBM14 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.17632/hn3nv7wxpk
title: Code for audio-video parameter extraction and statistical tests related to mosquito response to opposite-sex sound-stimuli

description: Mosquito sound and flight-position synchronization / postprocessing / parameter-extraction codes (Matlab); Statistics data and analysis files with figure plot (R)
DOI: 10.6084/m9.figshare.16780114.v1
title: Climatic shocks and internal migration - Appendix.xlsx

description: Abel, G, Muttarak, R, Stephany, F (2021). Climatic shocks and internal migration -<br>Evidence from 442 million personal records in 64 countries.
DOI: 10.6084/m9.figshare.3527348.v1
title: Appendix D. Sites, hosts, sampling intensity, species richness, and diversity (Fisher's alpha) for 1202 strains of foliar endophytes from 21 host species in tropical, temperate, and boreal localities.

description: Sites, hosts, sampling intensity, species richness, and diversity (Fisher's alpha) for 1202 strains of foliar endophytes from 21 host species in tropical, temperate, and boreal localities.
DOI: 10.17632/47g8xgcsrm
title: SmartFocus Intervention Repeated MANOVA

description: Ten mean score as combined dependent variables. Perceived attention problems ( PAD, SMN, LT), Self regulated strategy (BS, MS), Online Vigilance (SA, RE, MO), Media multitasking efficacy, MSLQ_Time and Study Environment, demographics. At three time points, T1: baseline, T2, after in-person training, T3, after completing 7-day journaling. Journaling Dataset.
DOI: 10.6084/m9.figshare.7306736.v1
title: Additional file 4_Agri_List of unretrievable articles

description: This file belongs to a following manuscript: "What evidence exists relating to ecotechnologies in agriculture for the recovery and reuse of carbon and nutrients in the boreo-temperate regions? A systematic map” The file contains a list of unretrievable articles.
DOI: 10.17632/sn5py5wbfn
title: Milder winters would alter patterns of freezing damage for epiphytic lichens from the trans-Himalayas

description: This is the supporting dataset to the paper Worthy et al. 2024 published in Scientific Reports. All methods used to produce the data are described in the methods section of the associated manuscript. A key is provided within each dataset to explain the headings and nature of each column of the data.

ABSTRACT
Trans-Himalayan winters are projected to become milder, with shifting precipitation patterns and freeze-thaw cycles; changing stressors for their lichen communities. Lichens from Antarctica and high latitudes are cryoresistant when dry, but susceptible to cell damage if frozen when wet, or subjected to repeated freeze-thaw events. Little is known regarding cryoresistance in high-elevation, mid-latitude lichens. We collected thalli of nine species of epiphytic lichenized fungi, from three regions of the trans-Himalayas; at ≈ 4000 m, 3400 m and 2400 m elevation. We subjected thalli to differing freezing (continuous -18°C and -36°C or freeze-thaw cycles in natural daylight) and moisture conditions. Even dry thalli suffered some damage. Frozen wet thalli had greater chlorophyll degradation and reduced chlorophyll content. There were no clear elevational trends in freeze-thaw susceptibility: it caused more damage than continuous freezing. The most freeze-thaw resilient lichens were Dolichousnea longissima (from 4000 m) and Usnea florida (from 2400 m). However, species from coldest sites were most resilient to extreme freezing. Under predicted climate change conditions these sites would experience fewer annual freeze-thaw cycles, annual sub-zero days and frost days. Reduced freezing constraints might allow range expansion of mid-elevation lichens, but increase competitive pressures and temperature stressors impacting high-elevation lichens.

HYPOTHESES
We aimed to test the following series of non-mutually exclusive hypotheses:
1. Dry thalli are less susceptible to freezing damage than are wet thalli.
2. Freeze-thaw cycles cause greater damage than continuous freezing.
3. Freeze-thaw cycles cause most damage to lichen from higher elevations.
4. Severe freezing temperatures have least impact on lichen from higher elevations.
5. Lichen from sites which rarely have sub-zero temperatures will be least able to recover after freezing damage.
DOI: 10.17632/hh2xj7vwv7
title: Methamphetamine use among gay and bisexual men in Germany: Trends in recent and regular use from the Gay Community Periodic Surveys

description: Gay and bisexual men typically report high rates of illicit drug use, including methamphetamine use. This paper aimed to analyze trends in crystal methamphetamine (‘crystal’) and powder methamphetamine (‘speed’) use among gay and bisexual men in Germany, and characterize the sociodemographic, drug use, and sexual risk practices of men who reported crystal use.
DOI: 10.6084/m9.figshare.28668485.v1
title: Supplementary Material for: Exploring the Black Box: What Happens During Brief Concentrated Exposure and Response Prevention for Obsessive-Compulsive Disorder?

description: Background: Brief concentrated exposure and response prevention (cERP) has shown promise as an efficacious treatment for obsessive-compulsive disorder (OCD). with higher response and remission rates compared to the first-line treatment. However, the mechanisms driving this success remain unclear. 
Methods: This longitudinal study included 56 patients with OCD who underwent cERP (Bergen four-day treatment; B4DT). Treatment mechanisms (e.g., willingness to engage in ERP, confidence in future self-guided ERP, leaning into anxiety) were assessed before and after each of the four treatment days by the Pre- and Post-Session Questionnaire (PPSQ-cERP). Changes in the PPSQ-cERP were used to predict treatment response assessed from baseline to post-treatment and three-month follow-up.
Results: All variables assessed by the PPSQ-cERP showed improvement throughout the cERP, as calculated using linear mixed models. Several variables, including willingness to engage in ERP and self-efficacy, improved after day 3, with small to medium effects (0.34–0.70). Confidence in future self-guided ERP improved on day 4 (the day on which it was addressed), with a small effect (0.31). Leaning into anxiety during ERP tasks on day 3 was identified as a predictor of OCD symptom improvement ( = 0.516, p = .050) by lasso regression, while group cohesion reached trend level ( = 0.239, p = .081).
Conclusion: This study highlights day-specific effects across all treatment mechanism variables. Notably, leaning into anxiety during ERP tasks was a key predictor of symptom improvement, offering new insights into refining OCD treatment strategies and enhancing clinical outcomes.
DOI: 10.17632/79frfcjzhm
title: Supplemental Table S1. Oligonucleotides used for polymerase chain reaction detection of antimicrobial resistance genes, SCCmec type, sanitizers resistance genes, biofilm formation genes

description: Antimicrobial resistance of Staphylococcus spp. isolated from organic and conventional Minas Frescal cheese producers in the state of São Paulo – Brazil
DOI: 10.6084/m9.figshare.15144000.v1
title: Simulation results

description: Performance metrics of all simulation runs. COMB --&gt; combined model (includes CPG for feedback gain 0)DCPL --&gt; decoupled modelZERO--&gt; oscillator-free model
DOI: 10.6084/m9.figshare.28719617.v1
title: Humpback whales harbor a highly novel and endemic gut microbiome that adapts to periods of fasting during migration

description: Humpback whales (<i>Megaptera novaeangliae</i>) are cosmopolitan in distribution and most populations migrate between foraging and breeding grounds each year<sup>1,2</sup>. As capital breeders, many humpbacks reduce foraging behavior and potentially fast for a few months of the year<sup>3</sup>. Here, we present a comparative genomic analysis of the gut microbiomes from humpbacks on two breeding grounds: Gulf of California, where feeding is common<sup>4-6</sup>, and Hawai‘i, where feeding is extremely rare<sup>7</sup>. The humpback whale gut microbiome shows unexpected taxonomic novelty, high endemism, and coevolutionary signal. These data also suggest an imbalance in the gut community with foraging reduction, supported by the enrichment of several aerobic metabolism genes, potentially indicative of inflammation, and pathogenesis gene sets used to colonize host tissues, modulate the immune system, and lyse tissues. Pathway reconstruction revealed gut communities shared symbiotic functions including the synthesis of essential amino acids, short chain fatty acids (SCFAs), and vitamins, as well as nitrogen salvaging mechanisms and degradation of biogeochemically relevant substrates like cellulose, chitin, and wax esters (including host chitinases). Complementary sequencing and taxonomic annotation revealed that more Clostridiaceae and Oscillospiraceae genera were in foraging whales, whereas fasting samples were enriched in Erysipelotrichaceae genera, associated with gut disease<sup>8,9</sup>. These data reveal striking changes in humpback whale gut microbiomes between their feeding and breeding grounds, raise the possibility that breeding whales are more susceptible to gut dysfunction or disease, and equally important reveal how humpback whales are likely making varying biogeochemical contributions to upper ocean communities over the course of the year.
DOI: 10.6084/m9.figshare.28766630.v1
title: raw_data.The change of aggregate fraction by sediment hardening affects nutrient cycling in water-plant-sediment system.zip

description: The growing impact of climate change, coupled with the widespread expansion of dam construction, has significantly disrupted the natural hydrological patterns of river-connected lakes. This disruption has led to the emergence of a novel phenomenon known as sediment hardening. This process alters the aggregate fraction of sediments, yet its potential effects on biogeochemical cycling within aquatic ecosystems remain largely unexplored and poorly understood. In this study, we investigated the effects of sediment aggregates of varying sizes on plant functional traits, water quality parameters, sediment properties, enzyme activity, and microbial characteristics through controlled simulations. Additionally, we explored how changes in aggregate fraction due to sediment hardening might influence nutrient cycling within water-plant-sediment systems. Our findings indicate that small macroaggregates (0.25–2 mm) play a pivotal role in determining the growth and stoichiometric properties of submerged macrophytes. Notably, hardened sediment was associated with a reduction in root anchorage force, suggesting that sediment hardening may contribute to root anchorage failure. Furthermore, we found that small macroaggregates fostered the highest microbial diversity, with distinct differences in microbial community structures across various aggregate size fractions. The partial least squares model revealed that shifts in aggregate fraction due to sediment hardening not only directly influenced the release of nitrogen and phosphorus from sediments but also indirectly affected nutrient cycling by altering the belowground traits of submerged macrophytes. Our results underscore the critical role of sediment hardening in regulating nutrient dynamics within aquatic ecosystems, providing new insights into the ways sediment alterations impact river-connected lakes.
DOI: 10.17632/dmdymrhnfd
title: Evaluation of efficacy and safety of subcutaneous acetaminophen in geriatrics and palliative care (APAPSubQ)

description: Introduction : Subcutaneous infusion (SC) or hypodermoclysis is an old perfusion technique that is generally underused although it has been shown to be effective. Acetaminophen (paracetamol) subcutaneous injection is performed in some centers despite the lack of conclusive evidence on its effectiveness. This study aims to evaluate the efficacy of subcutaneous infusion of Acetaminophen in the treatment of pain and fever in geriatrics and in palliative care and to determine its safety profile and possible side effects.
Material and Methods : This experimental study was conducted between 2018 and 2019 on adult patients in palliative care or in geriatrics in several hospitals and nursing homes in Lebanon. Primary outcomes were change in temperature; change in pain score on the numerical rating scale (NS) or on the Algoplus scale after 60 minutes from the start of the infusion; and the appearance of local side effects at the infusion site. Changes in the various parameters at 30 minutes and 180 minutes were also evaluated as secondary outcomes.