cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4561656
title: Cav3.2+/+ Mouse #406 CA1 EEG recording

description: A Ca<sub>v</sub>3.2<sup>+/+</sup> mouse (internal #406) was implanted with an intrahippocampal electrode for electrohippocampal CA1 EEG recordings. The differential electrode of the TA10ETA-F20 transmitter (Data Science International, DSI, USA, technical specifications: weight 3.9 g, volume 1.9 cc, input voltage range ± 2.5 mV, channel bandwidth (B) 1–200 Hz, nominal sampling rate (f) 1000 Hz (f = 5 B), temperature operating range 34–41 °C) was positioned at the following stereotaxic coordinates: (+)-lead, caudal − 2 mm, lateral of bregma 1.5 mm (right hemisphere), and dorsoventral (depth) 1.5 mm. The epidural reference electrode was positioned on the surface of the cerebellar cortex at the following stereotaxic coordinates: (−)-lead, bregma − 6 mm and lateral of bregma 1 mm (right<br> hemisphere). The deep tungsten electrodes (FHC, USA) are encapsuled with epoxylite with an<br> impedance of 50–100 kΩ (measured at 1000 Hz) and a shank diameter of 250 μm. For further details on the Ca<sub>v</sub>3.2 mouse model, animal experimentation approval, anaesthesia, transmitter insertion, stereotaxic electrode implantation, postoperative pain management and recovery, please refer to Arshaad MI et al., 2021. EEG data were exported to NeuroScore 3.2.9306-1 (Data Sciences International, DSI, USA). As the NeuroScore file format does not allow free access to the data, we have exported the raw EEG data as asci.-files, so that they can easily be imported in secondary analysis software. Importantly, the exported EEG data represent raw EEG data. No filtering, no artefact detection and/or artefact removal have been carried out. Thus, it is the users responsibility to adequately pretreat the data before further processing and analysis. As described in Arshaad MI et al. (2021), filtering, artefact detection and removal was carried out using NeuroScore before further analysis. The EEG data are presented here as a zip-folder for size reasons. Four EEG recordings are exported: R1 (a first 24h long-term EEG recording 10 days post transmitter implantation), R2 (a second 24h long-term recording 17 days post transmitter implantation), U1 (a 6h EEG recording following the first urethane injection (800 mg/kg i.p.) at day 18 post transmitter implantation), U2 (a 6h EEG recording after a second urethane injection (800 mg/kg i.p.) at day 25 post transmitter implantation). In addition, relative activity values are exported for all four recordings. For details on the recording procedure, please refer to Arshaad MI et al. (2021).
description: {"references": ["Enhanced hippocampal type II theta activity aND altered theta architecture in mice lacking the Cav3.2 T-type voltage-gated calcium channel. Arshaad MI, Siwek ME, Henseler C, Daubner J, Ehninger D, Hescheler J, Sachinidis A, Broich K, Papazoglou A, Weiergr\u00e4ber M. Sci Rep. 2021 Jan 13;11(1):1099. doi: 10.1038/s41598-020-79763-4."]}
DOI: 10.15129/f47dd7f5-efaa-4c1f-9b89-22e167322cc9
title: Data for: "Jet propulsion of a squid-inspired swimmer in the presence of background flow"

description: This dataset contains simulation data generated by the simulation of a squid-like numerical swimmer described in the article "Jet propulsion of a squid-inspired swimmer in the presence of background flow" published in the journal "Physics of Fluids". The data is the main finding of this research, including mean thrust, power input coefficient, propulsion factor, circulation histories and thrust temporal values of different maximum stroke ratios, jet velocity profiles, and various background flow speeds. They can be read by Excel.
DOI: 10.5281/zenodo.4561663
title: Cav3.2+/+ Mouse #410 CA1 EEG recording

description: A Ca<sub>v</sub>3.2<sup>+/+</sup> mouse (internal #410) was implanted with an intrahippocampal electrode for electrohippocampal CA1 EEG recordings. The differential electrode of the TA10ETA-F20 transmitter (Data Science International, DSI, USA, technical specifications: weight 3.9 g, volume 1.9 cc, input voltage range ± 2.5 mV, channel bandwidth (B) 1–200 Hz, nominal sampling rate (f) 1000 Hz (f = 5 B), temperature operating range 34–41 °C) was positioned at the following stereotaxic coordinates: (+)-lead, caudal − 2 mm, lateral of bregma 1.5 mm (right hemisphere), and dorsoventral (depth) 1.5 mm. The epidural reference electrode was positioned on the surface of the cerebellar cortex at the following stereotaxic coordinates: (−)-lead, bregma − 6 mm and lateral of bregma 1 mm (right<br> hemisphere). The deep tungsten electrodes (FHC, USA) are encapsuled with epoxylite with an<br> impedance of 50–100 kΩ (measured at 1000 Hz) and a shank diameter of 250 μm. For further details on the Ca<sub>v</sub>3.2 mouse model, animal experimentation approval, anaesthesia, transmitter insertion, stereotaxic electrode implantation, postoperative pain management and recovery, please refer to Arshaad MI et al., 2021. EEG data were exported to NeuroScore 3.2.9306-1 (Data Sciences International, DSI, USA). As the NeuroScore file format does not allow free access to the data, we have exported the raw EEG data as asci.-files, so that they can easily be imported in secondary analysis software. Importantly, the exported EEG data represent raw EEG data. No filtering, no artefact detection and/or artefact removal have been carried out. Thus, it is the users responsibility to adequately pretreat the data before further processing and analysis. As described in Arshaad MI et al. (2021), filtering, artefact detection and removal was carried out using NeuroScore before further analysis. The EEG data are presented here as a zip-folder for size reasons. Four EEG recordings are exported: R1 (a first 24h long-term EEG recording 10 days post transmitter implantation), R2 (a second 24h long-term recording 17 days post transmitter implantation), U1 (a 6h EEG recording following the first urethane injection (800 mg/kg i.p.) at day 18 post transmitter implantation), U2 (a 6h EEG recording after a second urethane injection (800 mg/kg i.p.) at day 25 post transmitter implantation). In addition, relative activity values are exported for all four recordings. For details on the recording procedure, please refer to Arshaad MI et al. (2021).
description: {"references": ["Enhanced hippocampal type II theta activity aND altered theta architecture in mice lacking the Cav3.2 T-type voltage-gated calcium channel. Arshaad MI, Siwek ME, Henseler C, Daubner J, Ehninger D, Hescheler J, Sachinidis A, Broich K, Papazoglou A, Weiergr\u00e4ber M. Sci Rep. 2021 Jan 13;11(1):1099. doi: 10.1038/s41598-020-79763-4."]}
DOI: 10.5281/zenodo.4561662
title: Cav3.2+/+ Mouse #410 CA1 EEG recording

description: A Ca<sub>v</sub>3.2<sup>+/+</sup> mouse (internal #410) was implanted with an intrahippocampal electrode for electrohippocampal CA1 EEG recordings. The differential electrode of the TA10ETA-F20 transmitter (Data Science International, DSI, USA, technical specifications: weight 3.9 g, volume 1.9 cc, input voltage range ± 2.5 mV, channel bandwidth (B) 1–200 Hz, nominal sampling rate (f) 1000 Hz (f = 5 B), temperature operating range 34–41 °C) was positioned at the following stereotaxic coordinates: (+)-lead, caudal − 2 mm, lateral of bregma 1.5 mm (right hemisphere), and dorsoventral (depth) 1.5 mm. The epidural reference electrode was positioned on the surface of the cerebellar cortex at the following stereotaxic coordinates: (−)-lead, bregma − 6 mm and lateral of bregma 1 mm (right<br> hemisphere). The deep tungsten electrodes (FHC, USA) are encapsuled with epoxylite with an<br> impedance of 50–100 kΩ (measured at 1000 Hz) and a shank diameter of 250 μm. For further details on the Ca<sub>v</sub>3.2 mouse model, animal experimentation approval, anaesthesia, transmitter insertion, stereotaxic electrode implantation, postoperative pain management and recovery, please refer to Arshaad MI et al., 2021. EEG data were exported to NeuroScore 3.2.9306-1 (Data Sciences International, DSI, USA). As the NeuroScore file format does not allow free access to the data, we have exported the raw EEG data as asci.-files, so that they can easily be imported in secondary analysis software. Importantly, the exported EEG data represent raw EEG data. No filtering, no artefact detection and/or artefact removal have been carried out. Thus, it is the users responsibility to adequately pretreat the data before further processing and analysis. As described in Arshaad MI et al. (2021), filtering, artefact detection and removal was carried out using NeuroScore before further analysis. The EEG data are presented here as a zip-folder for size reasons. Four EEG recordings are exported: R1 (a first 24h long-term EEG recording 10 days post transmitter implantation), R2 (a second 24h long-term recording 17 days post transmitter implantation), U1 (a 6h EEG recording following the first urethane injection (800 mg/kg i.p.) at day 18 post transmitter implantation), U2 (a 6h EEG recording after a second urethane injection (800 mg/kg i.p.) at day 25 post transmitter implantation). In addition, relative activity values are exported for all four recordings. For details on the recording procedure, please refer to Arshaad MI et al. (2021).
description: {"references": ["Enhanced hippocampal type II theta activity aND altered theta architecture in mice lacking the Cav3.2 T-type voltage-gated calcium channel. Arshaad MI, Siwek ME, Henseler C, Daubner J, Ehninger D, Hescheler J, Sachinidis A, Broich K, Papazoglou A, Weiergr\u00e4ber M. Sci Rep. 2021 Jan 13;11(1):1099. doi: 10.1038/s41598-020-79763-4."]}
DOI: 10.5281/zenodo.4557037
title: Cav3.2+/+ Mouse #38 CA1 EEG recording

description: A Ca<sub>v</sub>3.2+/+ mouse (internal #38) was implanted with an intrahippocampal electrode for electrohippocampal CA1 EEG recordings. The differential electrode of the TA10ETA-F20 transmitter (Data Science International, DSI, USA, technical specifications: weight 3.9 g, volume 1.9 cc, input voltage range ± 2.5 mV, channel bandwidth (B) 1–200 Hz, nominal sampling rate (f) 1000 Hz (f = 5 B), temperature operating range 34–41 °C) was positioned at the following stereotaxic coordinates: (+)-lead, caudal − 2 mm, lateral of bregma 1.5 mm (right hemisphere), and dorsoventral (depth) 1.5 mm. The epidural reference electrode was positioned on the surface of the cerebellar cortex at the following stereotaxic coordinates: (−)-lead, bregma − 6 mm and lateral of bregma 1 mm (right<br> hemisphere). The deep tungsten electrodes (FHC, USA) are encapsuled with epoxylite with an<br> impedance of 50–100 kΩ (measured at 1000 Hz) and a shank diameter of 250 μm. For further details on the Ca<sub>v</sub>3.2 mouse model, animal experimentation approval, anaesthesia, transmitter insertion, stereotaxic electrode implantation, postoperative pain management and recovery, please refer to Arshaad MI et al., 2021. EEG data were exported to NeuroScore 3.2.9306-1 (Data Sciences International, DSI, USA). As the NeuroScore file format does not allow free access to the data, we have exported the raw EEG data as asci.-files, so that they can easily be imported in secondary analysis software. Importantly, the exported EEG data represent raw EEG data. No filtering, no artefact detection and/or artefact removal have been carried out. Thus, it is the users responsibility to adequately pretreat the data before further processing and analysis. As described in Arshaad MI et al. (2021), filtering, artefact detection and removal was carried out using NeuroScore before further analysis. The EEG data are presented here as a zip-folder for size reasons. Four EEG recordings are exported: R1 (a first 24h long-term EEG recording 10 days post transmitter implantation), R2 (a second 24h long-term recording 17 days post transmitter implantation), U1 (a 6h EEG recording following the first urethane injection (800 mg/kg i.p.) at day 18 post transmitter implantation), U2 (a 6h EEG recording after a second urethane injection (800 mg/kg i.p.) at day 25 post transmitter implantation). In addition, relative activity values are exported for all four recordings. For details on the recording procedure, please refer to Arshaad MI et al. (2021).
description: {"references": ["Enhanced hippocampal type II theta activity aND altered theta architecture in mice lacking the Cav3.2 T-type voltage-gated calcium channel. Arshaad MI, Siwek ME, Henseler C, Daubner J, Ehninger D, Hescheler J, Sachinidis A, Broich K, Papazoglou A, Weiergr\u00e4ber M. Sci Rep. 2021 Jan 13;11(1):1099. doi: 10.1038/s41598-020-79763-4."]}
DOI: 10.5281/zenodo.4557036
title: Cav3.2+/+ Mouse #38 CA1 EEG recording

description: A Ca<sub>v</sub>3.2+/+ mouse (internal #38) was implanted with an intrahippocampal electrode for electrohippocampal CA1 EEG recordings. The differential electrode of the TA10ETA-F20 transmitter (Data Science International, DSI, USA, technical specifications: weight 3.9 g, volume 1.9 cc, input voltage range ± 2.5 mV, channel bandwidth (B) 1–200 Hz, nominal sampling rate (f) 1000 Hz (f = 5 B), temperature operating range 34–41 °C) was positioned at the following stereotaxic coordinates: (+)-lead, caudal − 2 mm, lateral of bregma 1.5 mm (right hemisphere), and dorsoventral (depth) 1.5 mm. The epidural reference electrode was positioned on the surface of the cerebellar cortex at the following stereotaxic coordinates: (−)-lead, bregma − 6 mm and lateral of bregma 1 mm (right<br> hemisphere). The deep tungsten electrodes (FHC, USA) are encapsuled with epoxylite with an<br> impedance of 50–100 kΩ (measured at 1000 Hz) and a shank diameter of 250 μm. For further details on the Ca<sub>v</sub>3.2 mouse model, animal experimentation approval, anaesthesia, transmitter insertion, stereotaxic electrode implantation, postoperative pain management and recovery, please refer to Arshaad MI et al., 2021. EEG data were exported to NeuroScore 3.2.9306-1 (Data Sciences International, DSI, USA). As the NeuroScore file format does not allow free access to the data, we have exported the raw EEG data as asci.-files, so that they can easily be imported in secondary analysis software. Importantly, the exported EEG data represent raw EEG data. No filtering, no artefact detection and/or artefact removal have been carried out. Thus, it is the users responsibility to adequately pretreat the data before further processing and analysis. As described in Arshaad MI et al. (2021), filtering, artefact detection and removal was carried out using NeuroScore before further analysis. The EEG data are presented here as a zip-folder for size reasons. Four EEG recordings are exported: R1 (a first 24h long-term EEG recording 10 days post transmitter implantation), R2 (a second 24h long-term recording 17 days post transmitter implantation), U1 (a 6h EEG recording following the first urethane injection (800 mg/kg i.p.) at day 18 post transmitter implantation), U2 (a 6h EEG recording after a second urethane injection (800 mg/kg i.p.) at day 25 post transmitter implantation). In addition, relative activity values are exported for all four recordings. For details on the recording procedure, please refer to Arshaad MI et al. (2021).
description: {"references": ["Enhanced hippocampal type II theta activity aND altered theta architecture in mice lacking the Cav3.2 T-type voltage-gated calcium channel. Arshaad MI, Siwek ME, Henseler C, Daubner J, Ehninger D, Hescheler J, Sachinidis A, Broich K, Papazoglou A, Weiergr\u00e4ber M. Sci Rep. 2021 Jan 13;11(1):1099. doi: 10.1038/s41598-020-79763-4."]}
DOI: 10.6084/m9.figshare.14140176.v1
title: Additional file 2 of The carbon footprint of dietary guidelines around the world: a seven country modeling study

description: Additional file 2. GHGE calculations of food based dietary guidelines in the 7-country study.
DOI: 10.6084/m9.figshare.14140176
title: Additional file 2 of The carbon footprint of dietary guidelines around the world: a seven country modeling study

description: Additional file 2. GHGE calculations of food based dietary guidelines in the 7-country study.
DOI: 10.6084/m9.figshare.14140204
title: Additional file 1 of Proposed virulence-associated genes of Streptococcus suis isolates from the United States serve as predictors of pathogenicity

description: Additional file 1. Confirmed and putative VAGs of S. suis used in this study. Name and accession numbers of the 71 previously published VAGs of S. suis used in this study.
DOI: 10.6084/m9.figshare.14140204.v1
title: Additional file 1 of Proposed virulence-associated genes of Streptococcus suis isolates from the United States serve as predictors of pathogenicity

description: Additional file 1. Confirmed and putative VAGs of S. suis used in this study. Name and accession numbers of the 71 previously published VAGs of S. suis used in this study.
DOI: 10.6084/m9.figshare.14140207.v1
title: Additional file 2 of Proposed virulence-associated genes of Streptococcus suis isolates from the United States serve as predictors of pathogenicity

description: Additional file 2. Characteristics of the 32 S. suis isolates in the validation set. List and identification of the validation set of isolates, including classification, serotype, ST, and SRA accession numbers.
DOI: 10.6084/m9.figshare.14140207
title: Additional file 2 of Proposed virulence-associated genes of Streptococcus suis isolates from the United States serve as predictors of pathogenicity

description: Additional file 2. Characteristics of the 32 S. suis isolates in the validation set. List and identification of the validation set of isolates, including classification, serotype, ST, and SRA accession numbers.
DOI: 10.6084/m9.figshare.14140213
title: Additional file 4 of Proposed virulence-associated genes of Streptococcus suis isolates from the United States serve as predictors of pathogenicity

description: Additional file 4. Pathotype, serotype, and ST distribution of clusters I-III identified by VAG profiling. Supporting information for Fig. 1 illustrating the three clusters identified by VAG profiling.
DOI: 10.6084/m9.figshare.14140210.v1
title: Additional file 3 of Proposed virulence-associated genes of Streptococcus suis isolates from the United States serve as predictors of pathogenicity

description: Additional file 3. Presence-absence data of the 71 VAGs for the training set of S. suis isolates (n = 208). Binary matrix representing the presence (1) and absence (0) of the 71 VAGs.
DOI: 10.6084/m9.figshare.14140213.v1
title: Additional file 4 of Proposed virulence-associated genes of Streptococcus suis isolates from the United States serve as predictors of pathogenicity

description: Additional file 4. Pathotype, serotype, and ST distribution of clusters I-III identified by VAG profiling. Supporting information for Fig. 1 illustrating the three clusters identified by VAG profiling.
DOI: 10.6084/m9.figshare.14140210
title: Additional file 3 of Proposed virulence-associated genes of Streptococcus suis isolates from the United States serve as predictors of pathogenicity

description: Additional file 3. Presence-absence data of the 71 VAGs for the training set of S. suis isolates (n = 208). Binary matrix representing the presence (1) and absence (0) of the 71 VAGs.
DOI: 10.6084/m9.figshare.14140216
title: Additional file 5 of Proposed virulence-associated genes of Streptococcus suis isolates from the United States serve as predictors of pathogenicity

description: Additional file 5. Chi-square and Fisher’s exact test results for the 16 VAGs tested. Chi-square and Fisher’s exact test results for evaluation associations between published S. suis VAGs and pathotype.
DOI: 10.6084/m9.figshare.14140216.v1
title: Additional file 5 of Proposed virulence-associated genes of Streptococcus suis isolates from the United States serve as predictors of pathogenicity

description: Additional file 5. Chi-square and Fisher’s exact test results for the 16 VAGs tested. Chi-square and Fisher’s exact test results for evaluation associations between published S. suis VAGs and pathotype.
DOI: 10.6084/m9.figshare.14140282
title: Additional file 1 of Fe(2)OG: an integrated HMM profile-based web server to predict and analyze putative non-haem iron(II)- and 2-oxoglutarate-dependent dioxygenase function in protein sequences

description: Additional file 1: Text S1. a HMM profiles of analyzed human i2OGdd-like sequences (n = 17). b Uniprot IDs of unprofiled human i2OGdd-like sequences (n = 53)
DOI: 10.6084/m9.figshare.14140282.v1
title: Additional file 1 of Fe(2)OG: an integrated HMM profile-based web server to predict and analyze putative non-haem iron(II)- and 2-oxoglutarate-dependent dioxygenase function in protein sequences

description: Additional file 1: Text S1. a HMM profiles of analyzed human i2OGdd-like sequences (n = 17). b Uniprot IDs of unprofiled human i2OGdd-like sequences (n = 53)
DOI: 10.6084/m9.figshare.14140291
title: Additional file 2 of Phototransformation kinetics of cyanobacterial toxins and secondary metabolites in surface waters

description: Additional file 2: Table S6. Observed degradation rates (kobs) for 54 cyanopeptides in lake matrix and buffered solutions at pH 7-10 are provided as a separate datasheet supplied as supporting information of this manuscript.
DOI: 10.6084/m9.figshare.14140291.v1
title: Additional file 2 of Phototransformation kinetics of cyanobacterial toxins and secondary metabolites in surface waters

description: Additional file 2: Table S6. Observed degradation rates (kobs) for 54 cyanopeptides in lake matrix and buffered solutions at pH 7-10 are provided as a separate datasheet supplied as supporting information of this manuscript.
DOI: 10.6084/m9.figshare.14140297
title: Additional file 2 of Toward developing a metastatic breast cancer treatment strategy that incorporates history of response to previous treatments

description: Additional file 2: Supplemental Table 1. A) Cell lines used in this publication [7, 17–19]; with their transcriptional subtype and ERBB2 status; B) List of compounds used to treat the breast cancer cell lines with their generalized target, and derived IQR response data.
DOI: 10.6084/m9.figshare.14140300
title: Additional file 3 of Toward developing a metastatic breast cancer treatment strategy that incorporates history of response to previous treatments

description: Additional file 3: Supplemental Table 2. Complete list of recommender system rules with one-to-one drug relationships. “_sens” and “_res” types of relationships were appended to the drug names and correspond to “sensitive” and “resistant” respectively.
DOI: 10.6084/m9.figshare.14140300.v1
title: Additional file 3 of Toward developing a metastatic breast cancer treatment strategy that incorporates history of response to previous treatments

description: Additional file 3: Supplemental Table 2. Complete list of recommender system rules with one-to-one drug relationships. “_sens” and “_res” types of relationships were appended to the drug names and correspond to “sensitive” and “resistant” respectively.
DOI: 10.6084/m9.figshare.14140297.v1
title: Additional file 2 of Toward developing a metastatic breast cancer treatment strategy that incorporates history of response to previous treatments

description: Additional file 2: Supplemental Table 1. A) Cell lines used in this publication [7, 17–19]; with their transcriptional subtype and ERBB2 status; B) List of compounds used to treat the breast cancer cell lines with their generalized target, and derived IQR response data.
DOI: 10.6084/m9.figshare.14140413
title: Additional file 1 of Congruent microbiome signatures in fibrosis-prone autoimmune diseases: IgG4-related disease and systemic sclerosis

description: Additional file 1. Supplementary Tables.
DOI: 10.6084/m9.figshare.14140413.v1
title: Additional file 1 of Congruent microbiome signatures in fibrosis-prone autoimmune diseases: IgG4-related disease and systemic sclerosis

description: Additional file 1. Supplementary Tables.
DOI: 10.6084/m9.figshare.14140417
title: Additional file 1 of Darwinian Selection Discriminates Young Athletes: the Relative Age Effect in Relation to Sporting Performance

description: Additional file 1. The Supplement file 1 can be accessed via the DOI: https://doi.org/10.6084/m9.figshare.12191898 .