cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1214220.10fu
title: SH1214220.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1214222.10fu
title: SH1214222.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1214224.10fu
title: SH1214224.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1214225.10fu
title: SH1214225.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1214226.10fu
title: SH1214226.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1214228.10fu
title: SH1214228.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1214229.10fu
title: SH1214229.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1214231.10fu
title: SH1214231.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1214234.10fu
title: SH1214234.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1214235.10fu
title: SH1214235.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.5281/zenodo.15136428
title: Table 1 in Contributions to the fungal diversity of the Cerrado: new records of lignocellulolytic Agaricomycetes

description: Table 1. List of species identified with their respective type localities based on the protologue reference. GO = Goiás, MA = Maranhão, TO = Tocantins, USA = United States of America. * New record for the referred state. ** New record for the Cerrado region. *** New record for Brazil.
SpeciesSpecimen LocalityType localityAuricularia delicata (Mont. ex Fr.) Henn *MAGuineaAuricularia mesenterica (Dicks.) Pers. *GO, TOGreat BritainAuricularia nigricans (Sw.) Birkebak, Looney & Sánchez-García *MG, GO, TOJamaicaCoriolopsis aspera (Jungh.) Teng **GO, MAJavaCoriolopsis byrsina (Mont.) Ryvarden *GOCubaCoriolopsis caperata (Berk.) MurrillTOMauritiusDaedalea quercina (L.) Pers.**GOEuropeDaedalea ryvardeniana Drechsler-Santos & Robledo *GOMato Grosso, BrazilDonkia pulcherrima (Berk. & M.A. Curtis) Pilát **MGSouth Carolina, USAFavolus brasiliensis (Fr.) Fr.MGBrazilFlavodon cf flavus (Klotzsch) Ryvarden **TOUSAFomes fasciatus (Sw.) Cooke *GOJamaicaFuscoporia gilva (Schwein.) T. Wagner & M. Fisch. *GO, TONorth Carolina, USAGloeophyllum striatum (Fr.) Murrill *MAJamaicaHexagonia papyracea Berk. *GOUnknownInonotus portoricensis (Overh.) Baltazar & Gibertoni **GOPuerto RicoMicroporellus dealbatus (Berk. & M.A. Curtis) Murrill **MGSouth Carolina, USAPanus fulvus (Berk.) Pegler & R.W. Rayner **TOSri LankaPerenniporia alboincarnata (Pat. & Gaillard) Decock & Ryvarden *GOVenezuelaPerenniporia tephropora (Mont.) Ryvarden *GOSurinamePerenniporiella tepeitensis (Murrill) Decock & R. Valenz. ***MGVeracruz, MéxicoPhellinus extensus (Lév.) Pat. *GOGuadaloupePleurotus djamor (Rumph. ex Fr.) Boedijn **TOAsiaPleurotus pulmonarius (Fr.) Quél. *TOEuropePycnoporus sanguineus (L.) Murrill*GO, TOSurinameSchizophyllum commune Fr. *GOSwedenStiptophyllum erubescens (Berk.) RyvardenGORio de Janeiro, BrazilTrametes cingulata Berk. *GOIndiaTrametes elegans (Spreng.) Fr. *MA, TOGuadaloupeTrametes membranacea (Sw.) Kreisel **MAJamaicaTrametes versicolor (L.) Lloyd*MAChileTrametes villosa (Sw.) Kreisel *GOJamaicaTrichaptum byssogenum (Jungh.) Ryvarden *GO, TOJavaTrichaptum perrottetii (Lév.) Ryvarden *TOJavaTrichaptum sector (Ehrenb.) Kreisel *TOSanta Catarina, BrazilTrichaptum sprucei (Berk.) Rajchenb. & Bianchin. *GOAmazonas, BrazilTrullella duracina (Pat.) Zmitr. *MGGuadaloupe
description: Published as part of Regio, Nicolas do Carmo, Palacio, Melissa, Westphalen, Mauro Carpes, Feuerstein, Shirley Cunha & Silveira, Rosa Mara Borges da, 2024, Contributions to the fungal diversity of the Cerrado: new records of lignocellulolytic Agaricomycetes, pp. 6 in Iheringia, Série Botânica (e 20241102) 79 on page 6, DOI: 10.21826/2446-82312024v79e20241102, http://zenodo.org/record/10988081
DOI: 10.5281/zenodo.15136429
title: Table 1 in Contributions to the fungal diversity of the Cerrado: new records of lignocellulolytic Agaricomycetes

description: Table 1. List of species identified with their respective type localities based on the protologue reference. GO = Goiás, MA = Maranhão, TO = Tocantins, USA = United States of America. * New record for the referred state. ** New record for the Cerrado region. *** New record for Brazil.
SpeciesSpecimen LocalityType localityAuricularia delicata (Mont. ex Fr.) Henn *MAGuineaAuricularia mesenterica (Dicks.) Pers. *GO, TOGreat BritainAuricularia nigricans (Sw.) Birkebak, Looney & Sánchez-García *MG, GO, TOJamaicaCoriolopsis aspera (Jungh.) Teng **GO, MAJavaCoriolopsis byrsina (Mont.) Ryvarden *GOCubaCoriolopsis caperata (Berk.) MurrillTOMauritiusDaedalea quercina (L.) Pers.**GOEuropeDaedalea ryvardeniana Drechsler-Santos & Robledo *GOMato Grosso, BrazilDonkia pulcherrima (Berk. & M.A. Curtis) Pilát **MGSouth Carolina, USAFavolus brasiliensis (Fr.) Fr.MGBrazilFlavodon cf flavus (Klotzsch) Ryvarden **TOUSAFomes fasciatus (Sw.) Cooke *GOJamaicaFuscoporia gilva (Schwein.) T. Wagner & M. Fisch. *GO, TONorth Carolina, USAGloeophyllum striatum (Fr.) Murrill *MAJamaicaHexagonia papyracea Berk. *GOUnknownInonotus portoricensis (Overh.) Baltazar & Gibertoni **GOPuerto RicoMicroporellus dealbatus (Berk. & M.A. Curtis) Murrill **MGSouth Carolina, USAPanus fulvus (Berk.) Pegler & R.W. Rayner **TOSri LankaPerenniporia alboincarnata (Pat. & Gaillard) Decock & Ryvarden *GOVenezuelaPerenniporia tephropora (Mont.) Ryvarden *GOSurinamePerenniporiella tepeitensis (Murrill) Decock & R. Valenz. ***MGVeracruz, MéxicoPhellinus extensus (Lév.) Pat. *GOGuadaloupePleurotus djamor (Rumph. ex Fr.) Boedijn **TOAsiaPleurotus pulmonarius (Fr.) Quél. *TOEuropePycnoporus sanguineus (L.) Murrill*GO, TOSurinameSchizophyllum commune Fr. *GOSwedenStiptophyllum erubescens (Berk.) RyvardenGORio de Janeiro, BrazilTrametes cingulata Berk. *GOIndiaTrametes elegans (Spreng.) Fr. *MA, TOGuadaloupeTrametes membranacea (Sw.) Kreisel **MAJamaicaTrametes versicolor (L.) Lloyd*MAChileTrametes villosa (Sw.) Kreisel *GOJamaicaTrichaptum byssogenum (Jungh.) Ryvarden *GO, TOJavaTrichaptum perrottetii (Lév.) Ryvarden *TOJavaTrichaptum sector (Ehrenb.) Kreisel *TOSanta Catarina, BrazilTrichaptum sprucei (Berk.) Rajchenb. & Bianchin. *GOAmazonas, BrazilTrullella duracina (Pat.) Zmitr. *MGGuadaloupe
description: Published as part of Regio, Nicolas do Carmo, Palacio, Melissa, Westphalen, Mauro Carpes, Feuerstein, Shirley Cunha & Silveira, Rosa Mara Borges da, 2024, Contributions to the fungal diversity of the Cerrado: new records of lignocellulolytic Agaricomycetes, pp. 6 in Iheringia, Série Botânica (e 20241102) 79 on page 6, DOI: 10.21826/2446-82312024v79e20241102, http://zenodo.org/record/10988081
DOI: 10.5281/zenodo.15136430
title: TABLE 1 in Phylogenetic analysis of the red algal tribe Ceramieae reveals multiple morphological homoplasies but defines new genera

description: TABLE 1. — All genera currently attributed to the tribe Ceramieae before this study (excluding two tiny parasitic genera: Syringocolax Reinsch and Centrocerocolax A.B.Joly).
Genus and generitypeNo. of speciesMorphological and anatomical features currently used to delimit the genusArdreanema R.E.Norris & I.A.Abbott Type: Ardreanema farifructa R.E.Norris & I.A.Abbott1Terete; 3 periaxial cells; unseriate gonimolobesCampylaephora J.Agardh Type: Campylaephora hypnaeoides J.Agardh5Terete; 6-8 periaxial cells; cortication complete; internal rhizoidal filamentsCarpoblepharis Kützing nom. cons. Type: no designation4Compressed; 6-8 periaxial cells; cortication complete; tetrasporangia produced in stichidia-like structuresCentroceras Kützing11Terete; 10-19 periaxial cells; 3 cortical initials per periaxial cell,Type: Centroceras clavulatum (C.Agardh) Montagnecortication complete, basipetal only, in straight rows; spines at nodes; spermatangia on periaxial cellsCeramium Roth Type: Ceramium virgatum Roth195Terete; 4-9 periaxial cells; 2, 4 or 5 cortical initials per periaxial cell, cortication basipetal and acropetal, complete or incomplete; internal rhizoids absent; spermatangia on cortical cellsCorallophila Weber van Bosse11Terete; 6-8 periaxial cells; 4 cortical initials per periaxial cell,Type: Corallophila kleiwegii Weber-van Bossecortication complete, basipetal only, in straight rows; spermatangia on cortical cellsGayliella T.O.Cho, L.J.McIvor & S.M.Boo15Terete; 4-8 periaxial cells; 3 cortical initials per periaxial cell,Type: Gayliella flaccida (Harvey ex Kützing) T.O.Cho & L.J.McIvorbasipetal and acropetal, cortication incomplete, basipetal only, in straight rows; spines absentHerpochondria F.Schmitz & Falkenberg6Compressed; 6-8 periaxial cells; cortication complete; lackingType: Herpochondria corallinae (G.Martens) Falkenberginternal rhizoids, tetrasporangia produced in stichidia-like structuresMicrocladia Greville Type: Microcladia glandulosa (Solander ex Turner) Greville10Branching planar, axes compressed; 6-8 periaxial cells; cortication complete; internal rhizoids absent in type speciesReinboldiella De Toni Type: Reinboldiella schmitziana (Reinbold) De Toni6Terete to compressed; 6 periaxial cells; cortication complete; tetrasporangia produced in stichidia-like structures
description: Published as part of Barros-Barreto, Maria Beatriz, Jaramillo, Maria Alejandra, Hommersand, Max H., Ferreira, Paulo C. G. & Maggs, Christine A., 2023, Phylogenetic analysis of the red algal tribe Ceramieae reveals multiple morphological homoplasies but defines new genera, pp. 17 in Cryptogamie, Algologie 44 (2) on page 17, DOI: 10.5252/cryptogamie-algologie2023v44a2, http://zenodo.org/record/7938655
DOI: 10.5281/zenodo.15136431
title: TABLE 1 in Phylogenetic analysis of the red algal tribe Ceramieae reveals multiple morphological homoplasies but defines new genera

description: TABLE 1. — All genera currently attributed to the tribe Ceramieae before this study (excluding two tiny parasitic genera: Syringocolax Reinsch and Centrocerocolax A.B.Joly).
Genus and generitypeNo. of speciesMorphological and anatomical features currently used to delimit the genusArdreanema R.E.Norris & I.A.Abbott Type: Ardreanema farifructa R.E.Norris & I.A.Abbott1Terete; 3 periaxial cells; unseriate gonimolobesCampylaephora J.Agardh Type: Campylaephora hypnaeoides J.Agardh5Terete; 6-8 periaxial cells; cortication complete; internal rhizoidal filamentsCarpoblepharis Kützing nom. cons. Type: no designation4Compressed; 6-8 periaxial cells; cortication complete; tetrasporangia produced in stichidia-like structuresCentroceras Kützing11Terete; 10-19 periaxial cells; 3 cortical initials per periaxial cell,Type: Centroceras clavulatum (C.Agardh) Montagnecortication complete, basipetal only, in straight rows; spines at nodes; spermatangia on periaxial cellsCeramium Roth Type: Ceramium virgatum Roth195Terete; 4-9 periaxial cells; 2, 4 or 5 cortical initials per periaxial cell, cortication basipetal and acropetal, complete or incomplete; internal rhizoids absent; spermatangia on cortical cellsCorallophila Weber van Bosse11Terete; 6-8 periaxial cells; 4 cortical initials per periaxial cell,Type: Corallophila kleiwegii Weber-van Bossecortication complete, basipetal only, in straight rows; spermatangia on cortical cellsGayliella T.O.Cho, L.J.McIvor & S.M.Boo15Terete; 4-8 periaxial cells; 3 cortical initials per periaxial cell,Type: Gayliella flaccida (Harvey ex Kützing) T.O.Cho & L.J.McIvorbasipetal and acropetal, cortication incomplete, basipetal only, in straight rows; spines absentHerpochondria F.Schmitz & Falkenberg6Compressed; 6-8 periaxial cells; cortication complete; lackingType: Herpochondria corallinae (G.Martens) Falkenberginternal rhizoids, tetrasporangia produced in stichidia-like structuresMicrocladia Greville Type: Microcladia glandulosa (Solander ex Turner) Greville10Branching planar, axes compressed; 6-8 periaxial cells; cortication complete; internal rhizoids absent in type speciesReinboldiella De Toni Type: Reinboldiella schmitziana (Reinbold) De Toni6Terete to compressed; 6 periaxial cells; cortication complete; tetrasporangia produced in stichidia-like structures
description: Published as part of Barros-Barreto, Maria Beatriz, Jaramillo, Maria Alejandra, Hommersand, Max H., Ferreira, Paulo C. G. & Maggs, Christine A., 2023, Phylogenetic analysis of the red algal tribe Ceramieae reveals multiple morphological homoplasies but defines new genera, pp. 17 in Cryptogamie, Algologie 44 (2) on page 17, DOI: 10.5252/cryptogamie-algologie2023v44a2, http://zenodo.org/record/7938655
DOI: 10.5281/zenodo.15136432
title: TABLE 2 in Phylogenetic analysis of the red algal tribe Ceramieae reveals multiple morphological homoplasies but defines new genera

description: TABLE 2. — Support values for genera. Abbreviations: BP, bootstrap (1000 replicates IQ-TREE); PP, posterior probability (Bayesian Inference); ND, no data. Symbol: –, no support.
Markersrbc LConcatenated (rbc L+ LSU +COI)Integrative (rbc L+ morphology)Partial LSU rRNACOI-5PGeneraPPBPPPBPPPBPPPBPPPBPCeramium1.00751.00981.00751.001000.9761Reinboldiella1.0077NDND1.0077NDNDNDNDCarpoblepharis1.0089NDND1.0089NDNDNDNDHerpochondria1.0099NDND1.001001.0099NDNDCeleceras1.0079NDND1.0077NDNDNDNDCampylaephora0.69–0.86–1.0086––0.99–Yoneshiguea gen. nov.1.00951.001001.0090NDNDNDNDPseudoceramium gen. nov.1.00861.00981.0093ND100NDNDStirkia gen. nov.1.0057––1.0082–––25Gayliella1.00991.00921.00991.0097––Corallophila––1.00830.9021––––C. atlantica +Ceramieae sp. 51.00420.94730.8746NDND0.99–Centroceras1.00991.00991.00991.00 (partial)99 (partial)––Ceramieae1.0034––0.97–––1.0035
description: Published as part of Barros-Barreto, Maria Beatriz, Jaramillo, Maria Alejandra, Hommersand, Max H., Ferreira, Paulo C. G. & Maggs, Christine A., 2023, Phylogenetic analysis of the red algal tribe Ceramieae reveals multiple morphological homoplasies but defines new genera, pp. 20 in Cryptogamie, Algologie 44 (2) on page 20, DOI: 10.5252/cryptogamie-algologie2023v44a2, http://zenodo.org/record/7938655