cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.iijpla
title: Occurrence Download

description: A dataset containing 187645 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Poa nemoralis L.",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 187645 records from 473 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038790-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.47tmmq
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Micronycteris buriri Larsen, Siles, Pedersen & Kwiecinski, 2011"
 ]
}

 The dataset includes 20 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062068-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25918588
title: <i>M. sativa</i><i> </i>cultivar Zhongmu No. 1

description: Modified GTF file
DOI: 10.15468/dl.zbkgnl
title: Occurrence Download

description: A dataset containing 1676809 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Chile"
 ]
}

 The dataset includes 1676809 records from 1136 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0038791-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15040638
title: The daily growth bands pattern of Tridacna - evidence from culture experiments
DOI: 10.5281/zenodo.15051573
title: The daily growth bands pattern of Tridacna - evidence from culture experiments
DOI: 10.5281/zenodo.15087755
title: 85 Chinese-Indonesian Business Word Translations

description: This data translates 85 business-related Mandarin words into Indonesian using three translation applications: Google Translate, Baidu Translate, and DeepL.
DOI: 10.5281/zenodo.15087757
title: 85 Chinese-Indonesian Business Word Translations

description: This data translates 85 business-related Mandarin words into Indonesian using three translation applications: Google Translate, Baidu Translate, and DeepL.
DOI: 10.5281/zenodo.15087270
title: The daily growth band patterns of Tridacna - evidence from culture experiments

description: Hourly resolution elements data of Tridacna derasa HTE2R and HTE2L is the original data of the manuscript: The daily growth band patterns of Tridacna - evidence from culture experiments.

The supplementary material includes the relationship between daily Mg/Ca average values of HTE2R and HTE2L and the water temperature, as well as the relationship between daily Mg/Ca average values and the daily growth rate of HTE2R and HTE2L.
DOI: 10.5281/zenodo.15087746
title: Casos de Éxito publicados en los datos del gobierno 2003-2013

description: Este conjunto de datos contiene información detallada sobre empresas y organizaciones que han creado soluciones innovadoras utilizando, entre otros, datos generados por las administraciones públicas durante el período de 2003 a 2013.
DOI: 10.5281/zenodo.15087747
title: Casos de Éxito publicados en los datos del gobierno 2003-2013

description: Este conjunto de datos contiene información detallada sobre empresas y organizaciones que han creado soluciones innovadoras utilizando, entre otros, datos generados por las administraciones públicas durante el período de 2003 a 2013.
DOI: 10.15468/dl.6n3cdp
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trifolium supinum Savi)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 11 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001774-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15056423
title: Source Data for Manuscript "Detecting Atmospheric CO2 Trends as Population-Level Signatures for Long-Term Stable Water Oceans and Biotic Activity on Temperate Terrestrial Exoplanets"

description: This dataset accompanies the manuscript entitled: "Detecting Atmospheric CO2 Trends as Population-Level Signatures for Long-Term Stable Water Oceans and Biotic Activity on Temperate Terrestrial Exoplanets", which will be submitted for publication in the Astrophysical Journal. Included are source files containing spectral data as well as atmospheric retrieval and trend inference posteriors. Additional README files are included throughout the dataset in order to explain file structures and units.
DOI: 10.5281/zenodo.15056424
title: Source Data for Manuscript "Detecting Atmospheric CO2 Trends as Population-Level Signatures for Long-Term Stable Water Oceans and Biotic Activity on Temperate Terrestrial Exoplanets"

description: This dataset accompanies the manuscript entitled: "Detecting Atmospheric CO2 Trends as Population-Level Signatures for Long-Term Stable Water Oceans and Biotic Activity on Temperate Terrestrial Exoplanets", which will be submitted for publication in the Astrophysical Journal. Included are source files containing spectral data as well as atmospheric retrieval and trend inference posteriors. Additional README files are included throughout the dataset in order to explain file structures and units.
DOI: 10.15468/dl.fhfdtp
title: Occurrence Download

description: A dataset containing 532 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trifolium tembense Fresen.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 532 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001775-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10517603
title: Reference Dataset for QfO Benchmark Webservice

description: This dataset contains the reference data used for the QfO benchmark webservice workflow (https://github.com/qfo/benchmark-webservice). It is build from the QfO reference proteomes provided by UniProt. The dataset is specific to the release of the reference proteome. The version of this dataset reflects the version of the QfO Reference Proteome dataset.
DOI: 10.5281/zenodo.15083829
title: Reference Dataset for QfO Benchmark Webservice

description: This dataset contains the reference data used for the QfO benchmark webservice workflow (https://github.com/qfo/benchmark-webservice). It is build from the QfO reference proteomes provided by UniProt. The dataset is specific to the release of the reference proteome. The version of this dataset reflects the version of the QfO Reference Proteome dataset.
DOI: 10.5281/zenodo.15087679
title: Reference Dataset for QfO Benchmark Webservice

description: This dataset contains the reference data used for the QfO benchmark webservice workflow (https://github.com/qfo/benchmark-webservice). It is build from the QfO reference proteomes provided by UniProt. The dataset is specific to the release of the reference proteome. The version of this dataset reflects the version of the QfO Reference Proteome dataset.
DOI: 10.5281/zenodo.15087752
title: Reference Dataset for QfO Benchmark Webservice

description: This dataset contains the reference data used for the QfO benchmark webservice workflow (https://github.com/qfo/benchmark-webservice). It is build from the QfO reference proteomes provided by UniProt. The dataset is specific to the release of the reference proteome. The version of this dataset reflects the version of the QfO Reference Proteome dataset.
DOI: 10.5281/zenodo.7919752
title: Reference Dataset for QfO Benchmark Webservice

description: This dataset contains the reference data used for the QfO benchmark webservice workflow (https://github.com/qfo/benchmark-webservice). It is build from the QfO reference proteomes provided by UniProt. The dataset is specific to the release of the reference proteome. The version of this dataset reflects the version of the QfO Reference Proteome dataset.
DOI: 10.5281/zenodo.7919753
title: Reference Dataset for QfO Benchmark Webservice

description: This dataset contains the reference data used for the QfO benchmark webservice workflow (https://github.com/qfo/benchmark-webservice). It is build from the QfO reference proteomes provided by UniProt. The dataset is specific to the release of the reference proteome. The version of this dataset reflects the version of the QfO Reference Proteome dataset.
DOI: 10.15468/dl.qydgm3
title: Occurrence Download

description: A dataset containing 10513 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Philippines, Thailand, Singapore, Viet Nam, Malaysia, Lao People’s Democratic Republic, Indonesia, Myanmar, Cambodia, Timor-Leste, Brunei Darussalam)",
 "OccurrenceStatus is Present",
 "TaxonKey is Testudines",
 "Year 2000-2024"
 ]
}

 The dataset includes 10513 records from 82 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001776-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.77ypmd
title: Occurrence Download

description: A dataset containing 249 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Trifolium tridentatum Hort.Berol., Trifolium tridentatum Lindl., Trifolium tridentatum Hort.Berol. ex Steud., 1841)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 249 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001777-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13383533
title: Thermal preference plasticity in ectotherms: Integrating temperature affinity and thermoregulation precision

description: #### Publication title: Thermal preference plasticity in ectotherms: integrating temperature affinity and thermoregulation precision

#### Publication authors: Gwenaëlle Deconninck, Nicolas Meyer, Hervé Colinet, Sylvain Pincebourde

#### Code author: Gwenaëlle Deconninck

#### Last Update: March 2025

 

This repository houses the code (‘Rcode_Tp_framework’.R) and data sets that were used for the article ‘Thermal preference plasticity in ectotherms: integrating temperature affinity and thermoregulation precision’ in The American Naturalist.  

 

ABSTRACT

Thermal preference (Tp) prevents ectotherms from encountering sublethal temperatures. Its plasticity likely modulates the importance of behavioral thermoregulation under changing conditions. While it has been widely recognized that the plasticity of Tp varies across ontogeny, the plasticity of this trait across life stages is poorly understood. We propose a novel conceptual framework relating two plastic components of Tp: its mean, which indicates temperature affinity, and its variance, which informs on the precision of behavioral thermoregulation. We tested this framework by measuring Tp variations across life stages of an insect model after several generations under contrasting developmental temperatures. Tp plastic responses differed among life stages. Generally, we obtained a bell-shape relationship between temperature affinity and precision of thermoregulation, indicating a strategy to avoid suboptimal and supra-optimal temperature extremes in D. melanogaster, but not in all life stages. We highlight the need to change the paradigm underlying the study of Tp beyond the simple use of mean or median.

 

R session info:

- R version 4.1.2 (2021-11-01)

- Platform: x86_64-apple-darwin17.0 (64-bit)

- Running under: macOS 13.1

 

Metadata for the data files are supplied below:

 

File ‘ad_ttes_generations.txt’ (contains all data for adults):

- name: id summarising main infos for Drosophila melanogaster individuals

- sexe: M/F for males/females

- age: V/F for virgin young flies (2 days) / mature flies (12 days)

- traitement: Rearing temperature in °C: 22, 25, 28, 23.5-26.5, 22-28 

- generation: G1: Generation 1, G3: Generation 3

- rampe: Gradient lane from A to F

- Tp: Thermal preference (°C)

 

File ‘L3_ttes_generations.txt’ (contains all data for larvae):

- stade: L3: larval stage 3; L3W: wandering larvae

- traitement: Rearing temperature in °C: 22, 25, 28, 23.5-26.5, 22-28 

- generation: G1: Generation 1, G3: Generation 3

- rampe: Gradient lane from A to F

- Tp: Thermal preference (°C)

 

For any inquiries or bugs, please contact corresponding author Gwenaëlle Deconninck (gwenaelle.deconninck@icloud.com).
DOI: 10.5281/zenodo.13383534
title: Thermal preference plasticity in ectotherms: integrating temperature affinity and thermoregulation precision

description: These datasheets and code were used for analyses and to produce the graphics of the article This dataset was used for analyses of the article 'Thermal preference plasticity in ectotherms: integrating temperature affinity and thermoregulation precision' submitted for publication in Ecology Letters.

Informations about the datasheet are in 'README and metadata' file.
DOI: 10.5281/zenodo.13710556
title: Thermal preference plasticity in ectotherms: integrating temperature affinity and thermoregulation precision

description: These datasheets and code were used for analyses and to produce the graphics of the article This dataset was used for analyses of the article 'Thermal preference plasticity in ectotherms: integrating temperature affinity and thermoregulation precision' submitted for publication in The American Naturalist.

Informations about the datasheet are in 'README and metadata' file.
DOI: 10.5281/zenodo.14750262
title: Thermal preference plasticity in ectotherms: Integrating temperature affinity and thermoregulation precision

description: #### Publication title: Thermal preference plasticity in ectotherms: integrating temperature affinity and thermoregulation precision

#### Publication authors: Gwenaëlle Deconninck, Nicolas Meyer, Hervé Colinet, Sylvain Pincebourde

#### Code author: Gwenaëlle Deconninck 

#### Last Update: January 2025

 

This repository houses the code (‘Rcode_Tp_framework’.R) and data sets that were used for the article ‘Thermal preference plasticity in ectotherms: integrating temperature affinity and thermoregulation precision’.

 

ABSTRACT

Thermal preference (Tp) prevents ectotherms from encountering sublethal temperatures. Its plasticity likely modulates the importance of behavioral thermoregulation under changing conditions. While it has been widely recognized that the plasticity of Tp varies across ontogeny, the plasticity of this trait across life stages is poorly understood. We propose a novel conceptual framework relating two plastic components of Tp: its mean, which indicates temperature affinity, and its variance, which informs on the precision of behavioral thermoregulation. We tested this framework by measuring Tp variations across life stages of an insect model after several generations under contrasting developmental temperatures. Tp plastic responses differed among life stages. Generally, we obtained a bell-shape relationship between temperature affinity and precision of thermoregulation, indicating a strategy to avoid suboptimal and supra-optimal temperature extremes in D. melanogaster, but not in all life stages. We highlight the need to change the paradigm underlying the study of Tp beyond the simple use of mean or median.

 

R session info:

- R version 4.1.2 (2021-11-01)

- Platform: x86_64-apple-darwin17.0 (64-bit)

- Running under: macOS 13.1

 

Metadata for the data files are supplied below:

 

File ‘ad_ttes_generations.txt’ (contains all data for adults):

- name: id summarising main infos for Drosophila melanogaster individuals

- sexe: M/F for males/females

- age: V/F for virgin young flies (2 days) / mature flies (12 days)

- traitement: Rearing temperature in °C: 22, 25, 28, 23.5-26.5, 22-28 

- generation: G1: Generation 1, G3: Generation 3

- rampe: Gradient lane from A to F

- Tp: Thermal preference (°C)

 

File ‘L3_ttes_generations.txt’ (contains all data for larvae):

- stade: L3: larval stage 3; L3W: wandering larvae

- traitement: Rearing temperature in °C: 22, 25, 28, 23.5-26.5, 22-28 

- generation: G1: Generation 1, G3: Generation 3

- rampe: Gradient lane from A to F

- Tp: Thermal preference (°C)

 

For any inquiries or bugs, please contact corresponding author Gwenaëlle Deconninck (gwenaelle.deconninck@icloud.com).
DOI: 10.5281/zenodo.14844754
title: Thermal preference plasticity in ectotherms: Integrating temperature affinity and thermoregulation precision

description: #### Publication title: Thermal preference plasticity in ectotherms: integrating temperature affinity and thermoregulation precision

#### Publication authors: Gwenaëlle Deconninck, Nicolas Meyer, Hervé Colinet, Sylvain Pincebourde

#### Code author: Gwenaëlle Deconninck 

#### Last Update: January 2025

 

This repository houses the code (‘Rcode_Tp_framework’.R) and data sets that were used for the article ‘Thermal preference plasticity in ectotherms: integrating temperature affinity and thermoregulation precision’.

 

ABSTRACT

Thermal preference (Tp) prevents ectotherms from encountering sublethal temperatures. Its plasticity likely modulates the importance of behavioral thermoregulation under changing conditions. While it has been widely recognized that the plasticity of Tp varies across ontogeny, the plasticity of this trait across life stages is poorly understood. We propose a novel conceptual framework relating two plastic components of Tp: its mean, which indicates temperature affinity, and its variance, which informs on the precision of behavioral thermoregulation. We tested this framework by measuring Tp variations across life stages of an insect model after several generations under contrasting developmental temperatures. Tp plastic responses differed among life stages. Generally, we obtained a bell-shape relationship between temperature affinity and precision of thermoregulation, indicating a strategy to avoid suboptimal and supra-optimal temperature extremes in D. melanogaster, but not in all life stages. We highlight the need to change the paradigm underlying the study of Tp beyond the simple use of mean or median.

 

R session info:

- R version 4.1.2 (2021-11-01)

- Platform: x86_64-apple-darwin17.0 (64-bit)

- Running under: macOS 13.1

 

Metadata for the data files are supplied below:

 

File ‘ad_ttes_generations.txt’ (contains all data for adults):

- name: id summarising main infos for Drosophila melanogaster individuals

- sexe: M/F for males/females

- age: V/F for virgin young flies (2 days) / mature flies (12 days)

- traitement: Rearing temperature in °C: 22, 25, 28, 23.5-26.5, 22-28 

- generation: G1: Generation 1, G3: Generation 3

- rampe: Gradient lane from A to F

- Tp: Thermal preference (°C)

 

File ‘L3_ttes_generations.txt’ (contains all data for larvae):

- stade: L3: larval stage 3; L3W: wandering larvae

- traitement: Rearing temperature in °C: 22, 25, 28, 23.5-26.5, 22-28 

- generation: G1: Generation 1, G3: Generation 3

- rampe: Gradient lane from A to F

- Tp: Thermal preference (°C)

 

For any inquiries or bugs, please contact corresponding author Gwenaëlle Deconninck (gwenaelle.deconninck@icloud.com).
DOI: 10.5281/zenodo.14916287
title: Thermal preference plasticity in ectotherms: Integrating temperature affinity and thermoregulation precision

description: #### Publication title: Thermal preference plasticity in ectotherms: integrating temperature affinity and thermoregulation precision

#### Publication authors: Anonymous (added later)

#### Code author: Anonymous (added later)

#### Last Update: January 2025

 

This repository houses the code (‘Rcode_Tp_framework’.R) and data sets that were used for the article ‘Thermal preference plasticity in ectotherms: integrating temperature affinity and thermoregulation precision’.

 

ABSTRACT

Thermal preference (Tp) prevents ectotherms from encountering sublethal temperatures. Its plasticity likely modulates the importance of behavioral thermoregulation under changing conditions. While it has been widely recognized that the plasticity of Tp varies across ontogeny, the plasticity of this trait across life stages is poorly understood. We propose a novel conceptual framework relating two plastic components of Tp: its mean, which indicates temperature affinity, and its variance, which informs on the precision of behavioral thermoregulation. We tested this framework by measuring Tp variations across life stages of an insect model after several generations under contrasting developmental temperatures. Tp plastic responses differed among life stages. Generally, we obtained a bell-shape relationship between temperature affinity and precision of thermoregulation, indicating a strategy to avoid suboptimal and supra-optimal temperature extremes in D. melanogaster, but not in all life stages. We highlight the need to change the paradigm underlying the study of Tp beyond the simple use of mean or median.

 

R session info:

- R version 4.1.2 (2021-11-01)

- Platform: x86_64-apple-darwin17.0 (64-bit)

- Running under: macOS 13.1

 

Metadata for the data files are supplied below:

 

File ‘ad_ttes_generations.txt’ (contains all data for adults):

- name: id summarising main infos for Drosophila melanogaster individuals

- sexe: M/F for males/females

- age: V/F for virgin young flies (2 days) / mature flies (12 days)

- traitement: Rearing temperature in °C: 22, 25, 28, 23.5-26.5, 22-28 

- generation: G1: Generation 1, G3: Generation 3

- rampe: Gradient lane from A to F

- Tp: Thermal preference (°C)

 

File ‘L3_ttes_generations.txt’ (contains all data for larvae):

- stade: L3: larval stage 3; L3W: wandering larvae

- traitement: Rearing temperature in °C: 22, 25, 28, 23.5-26.5, 22-28 

- generation: G1: Generation 1, G3: Generation 3

- rampe: Gradient lane from A to F

- Tp: Thermal preference (°C)

 

For any inquiries or bugs, please contact corresponding author Anonymous (added later).