cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10819227
title: Economic, institutional and environmental drivers of SME development for 21 EU states

description: SMEs are seen as important actors of national and regional development in many countries. This is a panel  data set on economic, institutional and environmental drivers of SME development for 21 EU states (Austria, Republic of Cyprus, Czech Republic, Denmark, Estonia, Finland, France, Germany, Hungary, Italy, Latvia, Lithuania, Luxembourg, Malta, Netherlands, Poland, Portugal, Romania, Slovakia, Slovenia and Spain) during 2011-2020 .
DOI: 10.5281/zenodo.10818037
title: Machining Simulated Data, Modal 0, 3 Cutting Teeth

description: This is a simulated data set for machining data based on the work done by T. Schmitz, K. Smith, Machining Dynamics: Frequency Response to Improved Productivity, Second Edition (Springer, New York, NY, 2019).

This is Modal 0, with 3 cutting teeth acorss forces from 600-800
DOI: 10.5281/zenodo.10798204
title: Machining Simulated Data, Modal 0, 3 Cutting Teeth

description: This is a simulated data set for machining data based on the work done by T. Schmitz, K. Smith, Machining Dynamics: Frequency Response to Improved Productivity, Second Edition (Springer, New York, NY, 2019).

This is Modal 0, with 3 cutting teeth acorss forces from 600-800
DOI: 10.5281/zenodo.10819223
title: Plate examples for OMERO memory issue

description: This will eventually be hosted at images.jax.org, currently uploaded to Zenodo to troubleshoot memory issues downloading from OMERO.
DOI: 10.5281/zenodo.10819224
title: Plate examples for OMERO memory issue

description: This will eventually be hosted at images.jax.org, currently uploaded to Zenodo to troubleshoot memory issues downloading from OMERO.
DOI: 10.5281/zenodo.10819231
title: Evolving Trends in Granulomatous Mastitis Research: A Bibliometric Analysis; Tables & Figures
DOI: 10.5281/zenodo.10819232
title: Evolving Trends in Granulomatous Mastitis Research: A Bibliometric Analysis; Tables & Figures
DOI: 10.5281/zenodo.10812874
title: Data repository associated with 'A Functional Map of the Human Intrinsically Disordered Proteome'

description: ES_MAP.zip



a hierarchically clustered map of the human IDR-ome

.cdt and .gtr files - outputs of Cluster3.0 software

can be visualized using JavaTreeView (see Tutorial_ES.pdf)


TUTORIAL.zip, information on:



visualization and analysis of the human IDR-ome map

search for proteins of interest and exploratory analyses of clusters

automatic export and analysis of exported clusters (code available at https://github.com/IPritisanac/ES_PW)


IDROME_SEQUENCES.zip



human proteome fasta file

IDRome fasta file

SPOT-Disorder v1.0 disorder boundaries



13 044 unique protein sequences with at least one IDR (>=30 amino acids)

21 252 total unique human IDRs




IDR_ALN.zip



alignments of IDR sequences across ENSEMBL orthologs

19 459 IDR alignments

UniProt ID and IDR boundaries for the human sequence are indicated in the name of the file


FAIDR_TSTATS.zip



hierarchical clustering of FAIDR t-statistics for 148 GO terms



.cdt, .gtr files from Cluster3.0

can be visualized using JavaTreeView

reveals the most predictive molecular features for the top performing 148 models




CLUSTERS_EXPLORE.zip



clusters obtained through exploratory analysis of the map provided in ES_MAP.zip

93 exported clusters in .cdt file format


CLUSTERS_AUTO.zip



clusters extracted from the hierarchically clustered IDR-ome map at a range of distance thresholds (0.4 - 0.8) in .cdt file format

distance refers to the uncentered correlation distance between vectors of Z-scores representing human IDRs

clusters extracted at different distance thresholds are split into separate archives

AUTO_GO_FEATS.xlsx - summary of GO-term overrepresentation and feature enrichment analyses; each distance threshold is in a separate sheet


FAIDR_HIGH_AUC_PPV_GO.zip



target files with annotations of 148 GO terms for which good quality FAIDR models could be obtained (AUC >= 0.7, PPV >= 0.4)

file format: three columns; 1st: IDR ID (includes IDR boundaries); 2nd: protein UniProt ID; 3rd: annotation of the protein to a GO term (1 if known to be associated with the GO term, 0 if not)
DOI: 10.5281/zenodo.10812875
title: Data repository associated with 'A Functional Map of the Human Intrinsically Disordered Proteome'

description: ES_MAP.zip



a hierarchically clustered map of the human IDR-ome

.cdt and .gtr files - outputs of Cluster3.0 software

can be visualized using JavaTreeView (see Tutorial_ES.pdf)


TUTORIAL.zip, information on:



visualization and analysis of the human IDR-ome map

search for proteins of interest and exploratory analyses of clusters

automatic export and analysis of exported clusters (code available at https://github.com/IPritisanac/ES_PW)


IDROME_SEQUENCES.zip



human proteome fasta file

IDRome fasta file

SPOT-Disorder v1.0 disorder boundaries



13 044 unique protein sequences with at least one IDR (>=30 amino acids)

21 252 total unique human IDRs




IDR_ALN.zip



alignments of IDR sequences across ENSEMBL orthologs

19 459 IDR alignments

UniProt ID and IDR boundaries for the human sequence are indicated in the name of the file


FAIDR_TSTATS.zip



hierarchical clustering of FAIDR t-statistics for 148 GO terms



.cdt, .gtr files from Cluster3.0

can be visualized using JavaTreeView

reveals the most predictive molecular features for the top performing 148 models




CLUSTERS_EXPLORE.zip



clusters obtained through exploratory analysis of the map provided in ES_MAP.zip

93 exported clusters in .cdt file format


CLUSTERS_AUTO.zip



clusters extracted from the hierarchically clustered IDR-ome map at a range of distance thresholds (0.4 - 0.8) in .cdt file format

distance refers to the uncentered correlation distance between vectors of Z-scores representing human IDRs

clusters extracted at different distance thresholds are split into separate archives

AUTO_GO_FEATS.xlsx - summary of GO-term overrepresentation and feature enrichment analyses; each distance threshold is in a separate sheet


FAIDR_HIGH_AUC_PPV_GO.zip



target files with annotations of 148 GO terms for which good quality FAIDR models could be obtained (AUC >= 0.7, PPV >= 0.4)

file format: three columns; 1st: IDR ID (includes IDR boundaries); 2nd: protein UniProt ID; 3rd: annotation of the protein to a GO term (1 if known to be associated with the GO term, 0 if not)
DOI: 10.5281/zenodo.10819216
title: Datasets for Paper "MetagenomicKG: a knowledge graph for metagenomic applications"

description: This repository contains some required data that is used for building MetagenomicKG. Please see more details in https://github.com/KoslickiLab/MetagenomicKG.
DOI: 10.6084/m9.figshare.25040261
title: <b>Targeted </b><b>Small Molecule Inhibitors Blocking the Cytolytic Effects of Pneumolysin and Homologous Toxins</b>

description: This work established CDC toxins as small molecule protein targets by using the UDP sequence of the cholesterol binding domain as binding site.
DOI: 10.6084/m9.figshare.25040261.v2
title: <b>Targeted </b><b>Small Molecules inhibitiors blocking the Cytolytic effects of Pneumolysin and Homologous Toxins</b>

description: This work established CDC toxins as small molecule protein targets by using the UDP sequence of the cholesterol binding domain as binding site.
DOI: 10.21227/rh89-dv06
title: A 2D Near-Field Microwave Imaging Database for Machine Learning Training

description: With the goal of improving machine learning approaches in inverse scattering, we provide an experimental data set collected with a 2D near-field microwave imaging system. Machine learning approaches often train solely on synthetic data, and one of the reasons for this is that no experimentally-derived public data set exists. The imaging system consists of 24 antennas surrounding the imaging region, connected via a switch to a vector network analyzer. The data set contains over 1000 full Scattering parameter scans of five targets at numerous positions from 3-5 GHz.
DOI: 10.5281/zenodo.10614487
title: Data and code in support of "Rethinking energy planning to mitigate environmental and climatic impacts of future African hydropower"

description: This dataset contains all the data and processing needed to produce results and figures reported in the manuscript "Rethinking energy planning to mitigate environmental and climatic impacts of future African hydropower".


 


The README file guides through the material available to support replication of the results and figures.
DOI: 10.5281/zenodo.10819169
title: Data and code in support of "Rethinking energy planning to mitigate environmental and climatic impacts of future African hydropower"

description: This dataset contains all the data and processing needed to produce results and figures reported in the manuscript "Rethinking energy planning to mitigate environmental and climatic impacts of future African hydropower".


 


The README file guides through the material available to support replication of the results and figures.
DOI: 10.5281/zenodo.8360436
title: Data and code in support of "Rethinking energy planning to mitigate environmental and climatic impacts of future African hydropower"

description: This dataset contains all the data and processing needed to produce results and figures reported in the manuscript "Rethinking energy planning to mitigate environmental and climatic impacts of future African hydropower".


 


The README file guides through the material available to support replication of the results and figures.
DOI: 10.5281/zenodo.10819286
title: Machining Simulated Data, Modal 0, 6 Cutting Teeth

description: This is a simulated data set for machining data based on the work done by T. Schmitz, K. Smith, Machining Dynamics: Frequency Response to Improved Productivity, Second Edition (Springer, New York, NY, 2019).

This is Modal 0, with 6 cutting teeth across forces from 600-800
DOI: 10.5281/zenodo.10805118
title: Machining Simulated Data, Modal 0, 6 Cutting Teeth

description: This is a simulated data set for machining data based on the work done by T. Schmitz, K. Smith, Machining Dynamics: Frequency Response to Improved Productivity, Second Edition (Springer, New York, NY, 2019).

This is Modal 0, with 6 cutting teeth across forces from 600-800
DOI: 10.5281/zenodo.10813151
title: Longyearbyen CO2 Lab - Magnetic Susceptibility and Spectral Gamma - DH2

description: This package contains two data sets acquired from the Longyearbyen CO2 Lab DH2 (previously known as BH1a) borehole:



Magnetic susceptibility

Spectral Gamma (K, U, Th and Total)


The depth interval covers 440 - 856 m.
DOI: 10.5281/zenodo.10813152
title: Longyearbyen CO2 Lab - Magnetic Susceptibility and Spectral Gamma - DH2

description: This package contains two data sets acquired from the Longyearbyen CO2 Lab DH2 (previously known as BH1a) borehole:



Magnetic susceptibility

Spectral Gamma (K, U, Th and Total)


The depth interval covers 440 - 856 m.
DOI: 10.5281/zenodo.10818614
title: Data and Analysis Files for Simulations of Radiatively-Cooled Magnetic Reconnection on the Z machine

description: This dataset contains processed simulation data, representative simulation output files, and Python code for analysis of simulations presented in Datta, Rishabh, et al. "Simulations of Radiatively Cooled Magnetic Reconnection Driven by Pulsed Power." J. Plasma Phys. (2024).

The simulations were run using GORGON, a radiative resistive MHD code with van Leer advection.Details on GORGON can be found in Chittenden et al. (2004) 10.1063/1.1643756, and Ciardi et al. (2007) 10.1063/1.2436479.
DOI: 10.5281/zenodo.10818615
title: Data and Analysis Files for Simulations of Radiatively-Cooled Magnetic Reconnection on the Z machine

description: This dataset contains processed simulation data, representative simulation output files, and Python code for analysis of simulations presented in Datta, Rishabh, et al. "Simulations of Radiatively Cooled Magnetic Reconnection Driven by Pulsed Power." J. Plasma Phys. (2024).

The simulations were run using GORGON, a radiative resistive MHD code with van Leer advection.Details on GORGON can be found in Chittenden et al. (2004) 10.1063/1.1643756, and Ciardi et al. (2007) 10.1063/1.2436479.
DOI: 10.5281/zenodo.10797909
title: Longyearbyen CO2 Lab - Downhole logging - DH5
DOI: 10.5281/zenodo.10797910
title: Longyearbyen CO2 Lab - Downhole logging - DH5
DOI: 10.5281/zenodo.10819326
title: Glossário de termos vinculados ao conceito de violência contra a mulher, com base no livro "A força da não violência: um vínculo ético-político", de Judith Butler

description: Glossário de termos vinculados ao conceito de violência contra a mulher, com base no livro “A força da não violência: um vínculo ético-político”, de Judith Butler, criado para a fundamentação teórica do Projeto de Pesquisa Regime de informação da rede de atendimento à mulher em situação de violência do estado da Bahia, vinculado à Universidade Federal da Bahia.
DOI: 10.5281/zenodo.10819325
title: Glossário de termos vinculados ao conceito de violência contra a mulher, com base no livro "A força da não violência: um vínculo ético-político", de Judith Butler

description: Glossário de termos vinculados ao conceito de violência contra a mulher, com base no livro “A força da não violência: um vínculo ético-político”, de Judith Butler, criado para a fundamentação teórica do Projeto de Pesquisa Regime de informação da rede de atendimento à mulher em situação de violência do estado da Bahia, vinculado à Universidade Federal da Bahia.
DOI: 10.5281/zenodo.10819350
title: brachypetersius_altus_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.10819349
title: brachypetersius_altus_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.10815686
title: The third research task in the project entitled "Research on the electrodialytic recovery of selected hydrophilic ionic liquids from post-reaction solutions" - NCN project SONATA-17, grant no. 2021/43/D/ST8/02776.

description: The third research task carried out under the project concerns development of mathematical model to describe the transport of ionic liquid in the electrodialysis process. The information relates to research performing for the NCN project SONATA-17, grant no. 2021/43/D/ST8/02776.
DOI: 10.5281/zenodo.10815685
title: The third research task in the project entitled "Research on the electrodialytic recovery of selected hydrophilic ionic liquids from post-reaction solutions" - NCN project SONATA-17, grant no. 2021/43/D/ST8/02776.

description: The third research task carried out under the project concerns development of mathematical model to describe the transport of ionic liquid in the electrodialysis process. The information relates to research performing for the NCN project SONATA-17, grant no. 2021/43/D/ST8/02776.
DOI: 10.5281/zenodo.10819288
title: Informações sobre atores da Rede de Atendimento a Mulher em situação de violência

description: Banco de dados das informações sobre quem são os atores da Rede de atendimento à mulher em situação de violência, conforme lista da Rede vinculada ao estado da Bahia, criado para subsidiar a metodologia do Projeto de Pesquisa Regime de informação da rede de atendimento à mulher em situação de violência do estado da Bahia, vinculado à Universidade Federal da Bahia.
DOI: 10.5281/zenodo.10819287
title: Informações sobre atores da Rede de Atendimento a Mulher em situação de violência

description: Banco de dados das informações sobre quem são os atores da Rede de atendimento à mulher em situação de violência, conforme lista da Rede vinculada ao estado da Bahia, criado para subsidiar a metodologia do Projeto de Pesquisa Regime de informação da rede de atendimento à mulher em situação de violência do estado da Bahia, vinculado à Universidade Federal da Bahia.
DOI: 10.5281/zenodo.7142505
title: Dataset 1 for Publication: Separation-dependent near-field effects in Mie scattering spectra of two optically trapped aerosol droplets

description: Dataset for Publication: ASCII files of Mie spectra for each experimentally analysed run, calibrated wavelength files, and brightfield images at each interdroplet separation.
DOI: 10.5281/zenodo.7142504
title: Dataset 1 for Publication: Separation-dependent near-field effects in Mie scattering spectra of two optically trapped aerosol droplets

description: Dataset for Publication: ASCII files of Mie spectra for each experimentally analysed run, calibrated wavelength files, and brightfield images at each interdroplet separation.
DOI: 10.5281/zenodo.10819305
title: Wikidata Lemmatization Dataset

description: The Wikidata Lemmatization Dataset was collected using the following SPARQL query: https://w.wiki/9TwH

Languages included in the dataset:



Akkadian : AKK (Q35518)

Arabic : AR (Q13955)

Czech : CS (Q9056)

German : DE (Q188)

English : EN (Q1860)

French : FR (Q150)

Hebrew : HE (Q9288)

Hittite : HIT (Q35668)

Italian : IT (Q652)

Russian : RU (Q7737)

Sumerian : SUX (Q36790)

Turkish : TR (Q256)


The choice of languages to include have to do with a collection of primary and secondary source documents which we have digitized (OCR) and are using as references for the FactGrid Cuneiform project. The resulting lexemes for each language are shared in CSV with the file names references each language, their Wikidata Q-ids, the number of lexemes at that date, and the date of access (MM_YYYY).

The format of each CSV includes the following fields:



lexeme : the Wikidata lexeme id (L-id)

lexemeLabel : the label assigned to the lexeme in Wikidata

lexical_category : the Wikidata Q-item for the part of speech

lexical_categoryLabel : the label assigned to the lexical category (e.g. noun, verb, adjective, etc.)


This dataset will be updated periodically using standard version control.
DOI: 10.5281/zenodo.10819306
title: Wikidata Lemmatization Dataset

description: The Wikidata Lemmatization Dataset was collected using the following SPARQL query: https://w.wiki/9TwH

Languages included in the dataset:



Akkadian : AKK (Q35518)

Arabic : AR (Q13955)

Czech : CS (Q9056)

German : DE (Q188)

English : EN (Q1860)

French : FR (Q150)

Hebrew : HE (Q9288)

Hittite : HIT (Q35668)

Italian : IT (Q652)

Russian : RU (Q7737)

Sumerian : SUX (Q36790)

Turkish : TR (Q256)


The choice of languages to include have to do with a collection of primary and secondary source documents which we have digitized (OCR) and are using as references for the FactGrid Cuneiform project. The resulting lexemes for each language are shared in CSV with the file names references each language, their Wikidata Q-ids, the number of lexemes at that date, and the date of access (MM_YYYY).

The format of each CSV includes the following fields:



lexeme : the Wikidata lexeme id (L-id)

lexemeLabel : the label assigned to the lexeme in Wikidata

lexical_category : the Wikidata Q-item for the part of speech

lexical_categoryLabel : the label assigned to the lexical category (e.g. noun, verb, adjective, etc.)


This dataset will be updated periodically using standard version control.
DOI: 10.5281/zenodo.10809435
title: Longyearbyen CO2 Lab - Downhole logging - DH4
DOI: 10.5281/zenodo.10809436
title: Longyearbyen CO2 Lab - Downhole logging - DH4
DOI: 10.5281/zenodo.10818375
title: Longyearbyen CO2 Lab - Downhole logging - DH1/DH2
DOI: 10.5281/zenodo.10818376
title: Longyearbyen CO2 Lab - Downhole logging - DH1/DH2
DOI: 10.5281/zenodo.10815671
title: The first research task in the project entitled "Research on the electrodialytic recovery of selected hydrophilic ionic liquids from post-reaction solutions" - NCN project SONATA-17, grant no. 2021/43/D/ST8/02776.

description: The first research task carried out under the project concerns study on the effectiveness of the selected hydrophilic ILs transport across ion-exchange membranes. The information relates to research performing for the NCN project SONATA-17, grant no. 2021/43/D/ST8/02776.
DOI: 10.5281/zenodo.10815670
title: The first research task in the project entitled "Research on the electrodialytic recovery of selected hydrophilic ionic liquids from post-reaction solutions" - NCN project SONATA-17, grant no. 2021/43/D/ST8/02776.

description: The first research task carried out under the project concerns study on the effectiveness of the selected hydrophilic ILs transport across ion-exchange membranes. The information relates to research performing for the NCN project SONATA-17, grant no. 2021/43/D/ST8/02776.
DOI: 10.5281/zenodo.10815681
title: The second research task in the project entitled "Research on the electrodialytic recovery of selected hydrophilic ionic liquids from post-reaction solutions" - NCN project SONATA-17, grant no. 2021/43/D/ST8/02776.

description: The second research task carried out under the project concerns study on the fouling and stability of the ion-exchange membranes. The information relates to research performing for the NCN project SONATA-17, grant no. 2021/43/D/ST8/02776.
DOI: 10.5281/zenodo.10815680
title: The second research task in the project entitled "Research on the electrodialytic recovery of selected hydrophilic ionic liquids from post-reaction solutions" - NCN project SONATA-17, grant no. 2021/43/D/ST8/02776.

description: The second research task carried out under the project concerns study on the fouling and stability of the ion-exchange membranes. The information relates to research performing for the NCN project SONATA-17, grant no. 2021/43/D/ST8/02776.
DOI: 10.5281/zenodo.10819487
title: Longyearbyen CO2 Lab - Thermal conductivity

description: Thermal conductivity data retrieved from the Longyearbyen CO2 Lab boreholes.
DOI: 10.5281/zenodo.10819486
title: Longyearbyen CO2 Lab - Thermal conductivity

description: Thermal conductivity data retrieved from the Longyearbyen CO2 Lab boreholes.
DOI: 10.5281/zenodo.10819463
title: clupeocharax_schoutedeni_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.10819464
title: clupeocharax_schoutedeni_decontaminated_FSCR.fasta.gz

description: .
DOI: 10.5281/zenodo.10728979
title: AAU_Mehsed_UWB_Dataset

description: We recorded data from a UAV and stationary anchors in an indoor environment. UAV war equipped with a Pixhawk 4 flight controller and a companion computer (RPi4), an IMU, a barometer, and two UWB transceiver (Qorvo MDEK1001). The UAV flew within a volume of roughly 5x8x8 m^3, covered by a motion capturing system, tracking the pose of the UAV at 60 Hz with sub-millimeter and sub-degree accuracy for ground truthing.Nine stationary UWB nodes, each consisting of a UWB transceiver and a companion computer, were arbitrarily placed in the environment and their true positions was captured. A SDS-TWR protocol with a fully meshed ranging scheme/cycling was used to measure the distance between any device. A full raning cycle takes roughly 1 second. The net ranging rate is 100 Hz. The range measurements were streamed using the ROS1 middleware to the UAV to be recorded onboard in ROS1 bag files. The devices were synchronized with chrony.During 12 flights, the UAV took off to 2m, executed three upward spirals reaching 8m, and landed at its initial position. Anchors were randomly placed along the spiral flight path at heights ranging from 0.3m to 3.3m in an area of 5x8m^2. Each flight lasted around 140 seconds.The spatial relationships, the sensor noise characteristics, and the pair-wise biases between the intial set of anchors and tags were determined with our Python range evaluation package (https://github.com/aau-cns/cnspy_ranging_evaluation).Since the accuracy of TOA measurements is typically influenced by factors such as the spatial relationship between device antennas, pair-wise biases, and range-based biases, we substitute the actual range measurements of the 12 recorded flight datasets by the true ranges with Gaussian noise.For these synthetic (hybrid) datasets, the zero-mean white Gaussian noise was applied with hree different standard deviations (0.1, 0.2, 0.3) and without biases. Note, that additional sequences can be created anytime, including biases, using the provided Python toolbox.

Further details can be found in the README.md