cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2lxcsp
title: CCDC 2410553: Experimental Crystal Structure Determination

description: Related Article: Li Xiong, Wenlei Tang, Chaozhi Xiong, Jiajun Du, Zhiyuan Zhang, Yuqing Qiu, Zhen-Wu Shao, Xuemei Zhou, Chong Liu|2025|Chem.Commun.|61|4030|doi:10.1039/D4CC06778A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lls11
title: CCDC 2401323: Experimental Crystal Structure Determination

description: Related Article: Yilin Shu, Jianmin Huang, Junfang Yang, Zhichun Shangguan, Junlong Ma, Cheng Li, Guanxin Zhang, Qian Peng, Xi-Sha Zhang, Qitang Fan, Bing Wang, Deqing Zhang|2025|Chem.Commun.|61|3994|doi:10.1039/D5CC00053J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lxctq
title: CCDC 2410554: Experimental Crystal Structure Determination

description: Related Article: Li Xiong, Wenlei Tang, Chaozhi Xiong, Jiajun Du, Zhiyuan Zhang, Yuqing Qiu, Zhen-Wu Shao, Xuemei Zhou, Chong Liu|2025|Chem.Commun.|61|4030|doi:10.1039/D4CC06778A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lls22
title: CCDC 2401324: Experimental Crystal Structure Determination

description: Related Article: Yilin Shu, Jianmin Huang, Junfang Yang, Zhichun Shangguan, Junlong Ma, Cheng Li, Guanxin Zhang, Qian Peng, Xi-Sha Zhang, Qitang Fan, Bing Wang, Deqing Zhang|2025|Chem.Commun.|61|3994|doi:10.1039/D5CC00053J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2lls55
title: CCDC 2401327: Experimental Crystal Structure Determination

description: Related Article: Yilin Shu, Jianmin Huang, Junfang Yang, Zhichun Shangguan, Junlong Ma, Cheng Li, Guanxin Zhang, Qian Peng, Xi-Sha Zhang, Qitang Fan, Bing Wang, Deqing Zhang|2025|Chem.Commun.|61|3994|doi:10.1039/D5CC00053J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.3yycu5
title: Occurrence Download

description: A dataset containing 346 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-126.26636 32.00453,-112.4224 32.00453,-112.4224 43.75243,-126.26636 43.75243,-126.26636 32.00453))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Glaucidium californicum P.L.Sclater, 1857"
 ]
}

 The dataset includes 346 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005422-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17863/cam.86279
title: Data and code from "Identifying Ocean Submesoscale Activity from Vertical Density Profiles Using Machine Learning"

description: Python and MATLAB code for training models, analyzing data, and generating plots in "Identifying Ocean Submesoscale Activity from Vertical Density Profiles Using Machine Learning", with data underlying the analyses and figures.
DOI: 10.5281/zenodo.14164945
title: hydroflows-test-data

description: test datasets for hydroflows

for individual data licenses see the data_catalog.yml file

v0.1.10 Update sfincs-model files to be compatible with hydromt_fiat v0.5.3 and fiat-toolbox v0.1.16

v0.1.9 Update CMIP6 derived data

v0.1.8 Add Aggregation areas in Delft-FIAT model

v0.1.7 Add CMIP6 derived stats

v0.1.6 Add CMIP6 data

v0.1.5 Add Coast-RP data

v0.1.4 Update wflow test data

v0.1.3: Added Merit-Basins and updated GPEX

v0.1.2: Added model simulations (missing global-data.tar.gz)

v0.1.1: Added GPEX & GTSM data
DOI: 10.5281/zenodo.14967510
title: hydroflows-test-data

description: test datasets for hydroflows

for individual data licenses see the data_catalog.yml file

v0.1.10 Update sfincs-model files to be compatible with hydromt_fiat v0.5.3 and fiat-toolbox v0.1.16

v0.1.9 Update CMIP6 derived data

v0.1.8 Add Aggregation areas in Delft-FIAT model

v0.1.7 Add CMIP6 derived stats

v0.1.6 Add CMIP6 data

v0.1.5 Add Coast-RP data

v0.1.4 Update wflow test data

v0.1.3: Added Merit-Basins and updated GPEX

v0.1.2: Added model simulations (missing global-data.tar.gz)

v0.1.1: Added GPEX & GTSM data
DOI: 10.5281/zenodo.14967702
title: ostorhinchus_chrysopomus_spades_01.fasta.gz
DOI: 10.5281/zenodo.14967703
title: ostorhinchus_chrysopomus_spades_01.fasta.gz
DOI: 10.5281/zenodo.14967630
title: BioDT school and hackathon 2025: sample data
DOI: 10.5281/zenodo.14967631
title: BioDT school and hackathon 2025: sample data
DOI: 10.5281/zenodo.14967626
title: chrysichthys_dendrophorus_spades_01.fasta.gz
DOI: 10.5281/zenodo.14967627
title: chrysichthys_dendrophorus_spades_01.fasta.gz
DOI: 10.5281/zenodo.10447429
title: Research Data and Code for "Interdisciplinarity in the 17th Century? A Co-Occurrence Analysis of Early Modern German Dissertation Titles"

description: This dataset documents results and code for the paper "Interdisciplinarity in the 17th Century? A Co-Occurrence Analysis of Early Modern German Dissertation Titles" by Stefan Heßbrüggen-Walter, forthcoming in *Synthese*. The data to be processed are contained in four files, derived from a larger dataset related to German dissertations and sourced from the national bibliography of 17th century German prints *VD 17* that will be released at a later date. More information can be found in the file `README.md`.
DOI: 10.5281/zenodo.10447430
title: Research Data and Code for "Interdisciplinarity in the 17th Century? A Co-Occurrence Analysis of Early Modern German Dissertation Titles"

description: This dataset documents results and code for the paper "Interdisciplinarity in the 17th Century? A Co-Occurrence Analysis of Early Modern German Dissertation Titles" by Stefan Heßbrüggen-Walter, forthcoming in *Synthese*. The data to be processed are contained in four files, derived from a larger dataset related to German dissertations and sourced from the national bibliography of 17th century German prints *VD 17* that will be released at a later date. More information can be found in the file `README.md`.
DOI: 10.5281/zenodo.14967651
title: congoglanis_alula_spades_01.fasta.gz
DOI: 10.5281/zenodo.14967652
title: congoglanis_alula_spades_01.fasta.gz
DOI: 10.15161/oar.it/212500
title: Carta Geologica d'Italia alla scala 1:50.000, F. 615 Melito di Porto Salvo

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 (eseguiti tra il 1994 e il 2013) comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.15161/oar.it/212501
title: Carta Geologica d'Italia alla scala 1:50.000, F. 615 Melito di Porto Salvo

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 (eseguiti tra il 1994 e il 2013) comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.15468/dl.kku7pn
title: Occurrence Download

description: A dataset containing 3724 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tripneustes ventricosus (Lamarck, 1816)"
 ]
}

 The dataset includes 3724 records from 84 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005423-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14967669
title: cucumis_hirsutus_spades_01.fasta.gz
DOI: 10.5281/zenodo.14967670
title: cucumis_hirsutus_spades_01.fasta.gz
DOI: 10.17863/cam.116141
title: Dataset for "Solar-driven paired CO2 reduction-alcohol oxidation using semiartificial suspension, photocatalyst sheet, and photoelectrochemical devices"

description: The dataset contains raw data supporting the article ‘Solar-driven paired CO2 reduction-alcohol oxidation using semiartificial suspension, photocatalyst sheet, and photoelectrochemical devices’. This work demonstrates a biohybrid platform composed of cyanamide-functionalized carbon nitride (CNX), an inexpensive, scalable photosensitizer that selectively oxidizes 4-methyl benzyl alcohol to its corresponding aldehyde. The system also incorporates indium tin oxide (ITO) nanoparticles as an electron conduit and biocatalyst support, and the enzyme formate dehydrogenase (FDH) for selective CO₂-to-formate conversion. This integrated semiartificial multicomponent system can be assembled in various configurations for bias-free operation, including (i) a photocatalytic suspension, (ii) a photocatalyst sheet, and (iii) a photoelectrochemical cell. The dataset is divided into five key parts: 1) Characterizations: Contains all physical characterization of the biohybrid systems, 2) Echem-PEC: Electrochemical and photoelectrochemical characterizations, 3) Colloidal Suspension: Performance of suspension photocatalyst system, 4) Photosheet: Performance of photocatalyst sheet, and 5) Two-electrode PEC: Performance of 2-electrode photoelectrochemical system. For more details about the experimental procedure, instrumentation, and data collection, see the manuscript and also the txt file CNx-ITO-FDH_DATASET.
DOI: 10.15468/dl.sqpwq6
title: Occurrence Download

description: A dataset containing 198938 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-126.01466 31.9467,-112.84304 31.9467,-112.84304 43.77605,-126.01466 43.77605,-126.01466 31.9467))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Chondestes grammacus (Say, 1822)"
 ]
}

 The dataset includes 198938 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005406-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/byfjhu
title: Table S7-1.tab

description: :unav
DOI: 10.15468/dl.65qd67
title: Occurrence Download

description: A dataset containing 805 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Brazil, Venezuela (Bolivarian Republic of), French Guiana, Bolivia (Plurinational State of), Colombia, Costa Rica, Guyana, Ecuador, Peru, Trinidad and Tobago)",
 "Geometry POLYGON((-86.79137 12.65157,-77.33999 -16.04837,-50.48422 -30.34071,-32.84932 -24.46241,-30.42885 -3.48494,-37.22923 6.31222,-65.35287 16.68569,-86.79137 12.65157))",
 "TaxonKey is Tetrapterys mucronata Cav."
 ]
}

 The dataset includes 805 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005388-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14945296
title: Salinity and temperature affect sperm motility, ATP content, fertilization success, embryonic development, and mitochondrial function in mussels Mytilus edulis from the Baltic and North Seas

description: This dataset provides experimental results from a study investigating the impacts of climate-driven temperature and salinity changes on the reproductive capacity of blue mussels (Mytilus edulis) in the Baltic Sea and North Sea.

In this study, we have measured and calculated sperm motility, ATP content, fertilization success, and embryonic developmental stage distribution of mussels from the Baltic and North Seas. Temperature (5°C, 10°C, 15°C, 20°C, 25°C)and salinity (5, 9, 13, 17, 21 for BS mussels and 9, 17, 21, 30, 35 for NS mussels) exposures were carried out in separate experimental runs.

Notably, sperm mitochondrial function assays were conducted only on the Baltic Sea mussels under the combined temperature (15°C, 20°C, 25°C) and osmolarity (630, 510, 390, 270, 150 mOsm) conditions. Sperm mitochondrial respiration and ROS production at oxidative phosphorylation (OXPHOS) and LEAK status were measured. The respiratory control ratio (RCR) and fractional electron leak (FEL) were calculated based on the measured traits.

These data support mechanistic insights into how climate-induced environmental variability may impair mussel reproduction, with implications for population resilience modeling in marginal seas. Researchers can reuse this dataset to validate ecophysiological models or compare adaptive thresholds across marine bivalve species.
DOI: 10.5281/zenodo.14945297
title: Salinity and temperature affect sperm motility, ATP content, fertilization success, embryonic development, and mitochondrial function in mussels Mytilus edulis from the Baltic and North Seas

description: This dataset provides experimental results from a study investigating the impacts of climate-driven temperature and salinity changes on the reproductive capacity of blue mussels (Mytilus edulis) in the Baltic Sea and North Sea.

In this study, we have measured and calculated sperm motility, ATP content, fertilization success, and embryonic developmental stage distribution of mussels from the Baltic and North Seas. Temperature (5°C, 10°C, 15°C, 20°C, 25°C)and salinity (5, 9, 13, 17, 21 for BS mussels and 9, 17, 21, 30, 35 for NS mussels) exposures were carried out in separate experimental runs.

Notably, sperm mitochondrial function assays were conducted only on the Baltic Sea mussels under the combined temperature (15°C, 20°C, 25°C) and osmolarity (630, 510, 390, 270, 150 mOsm) conditions. Sperm mitochondrial respiration and ROS production at oxidative phosphorylation (OXPHOS) and LEAK status were measured. The respiratory control ratio (RCR) and fractional electron leak (FEL) were calculated based on the measured traits.

These data support mechanistic insights into how climate-induced environmental variability may impair mussel reproduction, with implications for population resilience modeling in marginal seas. Researchers can reuse this dataset to validate ecophysiological models or compare adaptive thresholds across marine bivalve species.
DOI: 10.15468/dl.ap5e45
title: Occurrence Download

description: A dataset containing 2010 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Evechinus chloroticus (Valenciennes, 1846)"
 ]
}

 The dataset includes 2010 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005389-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14967148
title: Over one-micron-thick void-free perovskite layers enable highly efficient and fully printed perovskite solar cells (Simulation Data)
DOI: 10.5281/zenodo.14967149
title: Over one-micron-thick void-free perovskite layers enable highly efficient and fully printed perovskite solar cells (Simulation Data)
DOI: 10.5281/zenodo.14967693
title: cucumis_queenslandicus_spades_01.fasta.gz
DOI: 10.5281/zenodo.14967694
title: cucumis_queenslandicus_spades_01.fasta.gz
DOI: 10.5281/zenodo.14967691
title: Global change reshapes northern lakes towards browner, more nutrient-depleted and nitrogen-limited conditions

description: This is raw and processed data for paper Global change reshapes northern lakes towards browner, more nutrient-depleted and nitrogen-limited conditions for the Global Biogeochemical Cycles journal + an Rcode for Fig.5
DOI: 10.5281/zenodo.14967692
title: Global change reshapes northern lakes towards browner, more nutrient-depleted and nitrogen-limited conditions

description: This is raw and processed data for paper Global change reshapes northern lakes towards browner, more nutrient-depleted and nitrogen-limited conditions for the Global Biogeochemical Cycles journal + an Rcode for Fig.5
DOI: 10.5281/zenodo.14967745
title: paradoxoglanis_caudivittatus_spades_01.fasta.gz
DOI: 10.5281/zenodo.14967746
title: paradoxoglanis_caudivittatus_spades_01.fasta.gz
DOI: 10.5517/ccdc.csd.cc2k7bnt
title: CCDC 2360546: Experimental Crystal Structure Determination

description: Related Article: Christopher R. B. Swanson, Léa Gourbeyre, Grayson J. Ford, Pere Clapés, Sabine L. Flitsch|2025|J.Am.Chem.Soc.|147|6067|doi:10.1021/jacs.4c16732
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.wkzvrq
title: Occurrence Download

description: A dataset containing 41726 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is Brazil",
 "Geometry POLYGON((-58.18782 -30.77067,-56.19933 -30.77067,-56.19933 -29.34348,-58.18782 -29.34348,-58.18782 -30.77067))",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 41726 records from 124 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005424-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc2k7bpv
title: CCDC 2360547: Experimental Crystal Structure Determination

description: Related Article: Christopher R. B. Swanson, Léa Gourbeyre, Grayson J. Ford, Pere Clapés, Sabine L. Flitsch|2025|J.Am.Chem.Soc.|147|6067|doi:10.1021/jacs.4c16732
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.n4daqw
title: Occurrence Download

description: A dataset containing 69069 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-126.05188 31.73533,-113.47467 31.73533,-113.47467 43.18938,-126.05188 43.18938,-126.05188 31.73533))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Oreortyx pictus (Douglas, 1829)"
 ]
}

 The dataset includes 69069 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005378-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14446910
title: Caddisfly emergence is substantially affected by the combined exposure of titanium dioxide nanoparticles, natural organic matter and UV irradiation

description: Data and code of the associated publication in Journal of Hazardous Materials (https://doi.org/10.1016/j.jhazmat.2025.137819). Run renv::restore() inside an R project to avid package conflicts. Scripts are ordered and should be run accordingly.
DOI: 10.5281/zenodo.14446911
title: Caddisfly emergence is substantially affected by the combined exposure of titanium dioxide nanoparticles, natural organic matter and UV irradiation

description: Data and code of the associated publication in Journal of Hazardous Materials (https://doi.org/10.1016/j.jhazmat.2025.137819). Run renv::restore() inside an R project to avid package conflicts. Scripts are ordered and should be run accordingly.
DOI: 10.15468/dl.hamuyz
title: Occurrence Download

description: A dataset containing 683 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhizoprionodon longurio (Jordan & Gilbert, 1882)"
 ]
}

 The dataset includes 683 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005426-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14919940
title: Data associated with "Metabolic reaction fluxes as amplifiers and buffers of risk alleles for coronary artery disease"

description: Abstract

Genome-wide association studies have identified thousands of variants associated with disease risk but the mechanism by which such variants contribute to disease remains largely unknown. Indeed, a major challenge is that variants do not act in isolation but rather in the framework of highly complex biological networks, such as the human metabolic network, which can amplify or buffer the effect of specific risk alleles on disease susceptibility. Here we use genetically predicted reaction fluxes to perform a systematic search for metabolic fluxes acting as buffers or amplifiers of coronary artery disease (CAD) risk alleles. Our analysis identifies 30 risk locus - reaction flux pairs with significant interaction on CAD susceptibility involving 18 individual reaction fluxes and 8 independent risk loci. Notably, many of these reactions are linked to processes with putative roles in the disease such as the metabolism of inflammatory mediators. In summary, this work establishes proof of concept that biochemical reaction fluxes can have non-additive effects with risk alleles and provides novel insights into the interplay between metabolism and genetic variation on disease susceptibility.

Description

This dataset provides summary statistics for the interaction effects between risk allele dosage and reaction fluxes on CAD and myocardial infarction (MI) risk in UK Biobank participants of European genetic ancestries. We use two complementary methods to evaluate buffering/amplification effects. First, we test for a significant interaction effect size between risk allele dosage and reaction flux value using a Cox proportional-hazards model for disease risk. Second, for each pair of reaction flux values and risk alleles, we estimate the effect of reaction flux value on disease risk within each dosage of the risk allele (0, 1, or 2), and Welch's ANOVA is then used to evaluate the significance of the differences between effect sizes across risk allele dosages. We consider that there is a buffering/amplification of disease susceptibility between a variant and a reaction flux when it is statistically significant with both approaches.

To facilitate the exploration of these results, we provide two interactive HTML files that allow users to visualize and query all interactions with P < 0.001 for CAD and MI risk.  

Additional files with reaction and variant annotation are also provided.
DOI: 10.15468/dl.7aegrg
title: Occurrence Download

description: A dataset listing the 139 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tegenaria Latreille, 1804"
 ]
}

 The dataset's 139 records were derived from 492 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005420-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.