cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/cc3wlbw
title: CCDC 115888: Experimental Crystal Structure Determination

description: Related Article: C.Sudbrake, B.Muller, H.Vahrenkamp|1999|Eur.J.Inorg.Chem.|1999|2009|doi:10.1002/(SICI)1099-0682(199911)1999:11<2009::AID-EJIC2009>3.3.CO;2-E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3wl7s
title: CCDC 115885: Experimental Crystal Structure Determination

description: Related Article: J.-C.Berthet, M.Nierlich, M.Ephritikhine|2003|Polyhedron|22|3475|doi:10.1016/j.poly.2003.09.008
description: Related Article: J.C.Berthet, M.Lance, M.Nierlich, M.Ephritikhine|1999|Eur.J.Inorg.Chem.|1999|2005|doi:10.1002/(SICI)1099-0682(199911)1999:11<2005::AID-EJIC2005>3.3.CO;2-1
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc3wlcx
title: CCDC 115889: Experimental Crystal Structure Determination

description: Related Article: C.Sudbrake, B.Muller, H.Vahrenkamp|1999|Eur.J.Inorg.Chem.|1999|2009|doi:10.1002/(SICI)1099-0682(199911)1999:11<2009::AID-EJIC2009>3.3.CO;2-E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.repmpf
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Jiangella alba Qin et al., 2009"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013248-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dxypjc
title: Occurrence Download

description: A dataset containing 4768 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Geometry POLYGON((-85.71744 52.29457,-104.35422 52.23613,-109.07199 46.07219,-113.55213 40.93438,-104.77504 28.37249,-93.01144 24.54204,-76.22804 27.75484,-71.3944 34.41402,-78.67448 44.63841,-85.71744 52.29457))",
 "HasGeospatialIssue is false",
 "TaxonKey is Hypophthalmichthys molitrix (Valenciennes, 1844)",
 "Year 1970-2019"
 ]
}

 The dataset includes 4768 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013249-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3602213_d16.v1
title: Additional file 7: Table S4. of Quantitative proteomics of the tobacco pollen tube secretome identifies novel pollen tube guidance proteins important for fertilization

description: List of protein accessions derived from protein supergroup (see materials and methods) pairwise comparison listing unique and common protein accessions between SIV-PS and in vitro pollen tube secretomes and proteomes. The data file also includes individual replicates of in vitro pollen tube-secreted proteins and identified total proteomes. (XLSX 30434 kb)
DOI: 10.6084/m9.figshare.c.3602273_d5.v1
title: Additional file 2 of Identification of in vitro and in vivo disconnects using transcriptomic data

description: Top 10 biclusters in vitro . List of top 10 biclusters in vitro with all the disconnected genes and compounds that are bicluster members.
DOI: 10.6084/m9.figshare.c.3602279_d4.v1
title: Additional file 11: of Deep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genes

description: List of the primers and probes used to validate sequencing derived indels. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3602273_d6.v1
title: Additional file 7 of Identification of in vitro and in vivo disconnects using transcriptomic data

description: Integrated results - all. List of disconnected genes for all compounds organized in three groups (see Discussion).
DOI: 10.6084/m9.figshare.c.3602213_d17.v1
title: Additional file 8: Table S5. of Quantitative proteomics of the tobacco pollen tube secretome identifies novel pollen tube guidance proteins important for fertilization

description: Pollen tube secretome protein accessions mapped to the Arabidopsis semi-in vivo transcriptome. (XLSX 178 kb)
DOI: 10.6084/m9.figshare.c.3602279_d6.v1
title: Additional file 8: of Deep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genes

description: List of 345 putative deleterious LoF variants. (XLSX 31 kb)
DOI: 10.6084/m9.figshare.c.3602213_d19.v1
title: Additional file 17: Table S6. of Quantitative proteomics of the tobacco pollen tube secretome identifies novel pollen tube guidance proteins important for fertilization

description: GO terms enriched in the semi-in vivo pollen tube secretome. (XLSX 472 kb)
DOI: 10.6084/m9.figshare.c.3602279_d7.v1
title: Additional file 9: of Deep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genes

description: Gene ontology terms significantly enriched or depleted in 345 putative deleterious LoF variants affected genes. p values were generated by Bonferroni correction for multiple tests. (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3602279_d8.v1
title: Additional file 3: of Deep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genes

description: Summary of SNP genotyping per animal using the BovineHD BeadChip. (XLSX 9 kb)
DOI: 10.6084/m9.figshare.c.3602279_d9.v1
title: Additional file 5: of Deep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genes

description: Gene ontology terms significantly ( p â
DOI: 10.6084/m9.figshare.c.3602279_d10.v1
title: Additional file 10: of Deep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genes

description: List of inconsistent calls and corresponding primers used in validating by sequencing. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.28045625
title: CompiledData-Raw-Dtable-ALLtails-TCGA-OV-1228.txt

description: Compiled Hazard Ratio (HRz) scores for overall survival using RNA-Seq ratios of OPCML:gene[i] to assess quantitative relationships.
DOI: 10.6084/m9.figshare.28045625.v1
title: CompiledData-Raw-Dtable-ALLtails-TCGA-OV-1228.txt

description: Compiled Hazard Ratio (HRz) scores for overall survival using RNA-Seq ratios of OPCML:gene[i] to assess quantitative relationships.
DOI: 10.6084/m9.figshare.c.3602519_d1.v1
title: MOESM1 of Endothelial activation, haemostasis and thrombosis biomarkers in Ugandan children with severe malaria participating in a clinical trial

description: Additional file 2. Biomarkers for detailed sub-set analysis. This dataset was used for analysis of correlations of biomarkers at baseline and change in biomarkers from baseline to day 4. The file is available as an excel spreadsheet.
DOI: 10.6084/m9.figshare.c.3602525_d1.v1
title: Additional file 1: of Research priorities for improving infant and young child feeding in humanitarian emergencies

description: Priority and agreement scores and ranking for research questions on Infant and Young Child Feeding in Emergency. (IYCF-E) (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3602519_d2.v1
title: MOESM2 of Endothelial activation, haemostasis and thrombosis biomarkers in Ugandan children with severe malaria participating in a clinical trial

description: Additional file 1. Longitudinal dataset. This dataset was used for analysis of change in VWF antigen over time. The file is available as an excel spreadsheet.
DOI: 10.6084/m9.figshare.c.3602546_d1.v1
title: MOESM4 of Designing intracellular metabolism for production of target compounds by introducing a heterologous metabolic reaction based on a Synechosystis sp. 6803 genome-scale model

description: Additional file : Table S4. Total number of metabolic reactions added when building the SyHyMeP, and combinations of metabolic reaction pathways that satisfy them.
DOI: 10.6084/m9.figshare.c.3602546_d2.v1
title: MOESM3 of Designing intracellular metabolism for production of target compounds by introducing a heterologous metabolic reaction based on a Synechosystis sp. 6803 genome-scale model

description: Additional file : Table S3. List of metabolites ignored when building the SyHyMeP.
DOI: 10.6084/m9.figshare.c.3602546_d3.v1
title: MOESM2 of Designing intracellular metabolism for production of target compounds by introducing a heterologous metabolic reaction based on a Synechosystis sp. 6803 genome-scale model

description: Additional file: Table S2. Detailed intracellular metabolic reactions that need to be activated, if the yield of succinic acid production according to the SyHyMeP is 155.
DOI: 10.6084/m9.figshare.c.3602774_d9.v1
title: Additional file 10: Table S9. of Canalization of gene expression is a major signature of regulatory cold adaptation in temperate Drosophila melanogaster

description: Africa-biased genes (FDR
DOI: 10.6084/m9.figshare.c.3602774_d10.v1
title: Additional file 8: Table S7. of Canalization of gene expression is a major signature of regulatory cold adaptation in temperate Drosophila melanogaster

description: Downregulated genes rec90 vs. RT (FDR
DOI: 10.6084/m9.figshare.c.3602774_d11.v1
title: Additional file 6: Table S5. of Canalization of gene expression is a major signature of regulatory cold adaptation in temperate Drosophila melanogaster

description: Downregulated genes rec15 vs. RT (FDR
DOI: 10.6084/m9.figshare.c.3602774_d12.v1
title: Additional file 11: Table S10. of Canalization of gene expression is a major signature of regulatory cold adaptation in temperate Drosophila melanogaster

description: Viability after ubiquitous knockdown via RNAi for 48 genes (XLS 31Â kb)
DOI: 10.6084/m9.figshare.c.3602825_d1.v1
title: Additional file 12: of In silico lineage tracing through single cell transcriptomics identifies a neural stem cell population in planarians

description: A vignette for reproducing the computational analyses. (TXT 11 kb)
DOI: 10.5281/zenodo.14509038
title: Astrocytes provide the temporal dynamic required for memory formation
DOI: 10.5281/zenodo.14509039
title: Astrocytes provide the temporal dynamic required for memory formation
DOI: 10.6084/m9.figshare.c.3602834_d1.v1
title: Additional file 2: of Lethal chondrodysplasia in a family of Holstein cattle is associated with a de novo splice site variant of COL2A1

description: Non-parametric multipoint linkage analysis output data. Z-mean values and LOD scores and their chromosome-wide error probabilities (P) along a grid of equally spaced locations (2 Mb) of all 29 autosomes. The minimum and maximum achievable values in the present linkage analyses are given in the first two rows. Chromosome-wide significant Z-mean values and LOD scores and their P-values are highlighted in green. (XLSX 53 kb)
DOI: 10.15468/dl.cdbv2u
title: Occurrence Download

description: A dataset containing 173871 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Potamopyrgus antipodarum (J.E.Gray, 1843)"
 ]
}

 The dataset includes 173871 records from 451 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037784-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3603044_d1.v1
title: Additional file 3: of Is protection against florivory consistent with the optimal defense hypothesis?

description: Simulated Folivory Data. Treatment indicates the percentage of young leaf tissue removed from the plant; leaves indicates the total leaves per plant prior to removal; fruit, seeds, and viable indicate total pods, seeds, and viable seeds at the end of the experiment. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.c.3603029_d5.v1
title: Additional file 1: of The multiple evolutionary origins of the eukaryotic N-glycosylation pathway

description: Accession numbers for sequences in TableÂ 1. (XLS 63Â kb)
DOI: 10.6084/m9.figshare.c.3603044_d2.v1
title: Additional file 1: of Is protection against florivory consistent with the optimal defense hypothesis?

description: Plant Trait and Bioassay Data. Organ indicates the plant tissue tested, Protein indicates mg protein g−1 FW, and HCNp indicates the cyanogenic potential as μmol CN− g−1 FW. Bioassay results appear in the green box below plant chemical trait data. (XLSX 26 kb)
DOI: 10.6084/m9.figshare.c.3603050_d1.v1
title: MOESM1 of Serum concentration of gastrin, cortisol and C-reactive protein in a group of Norwegian sled dogs during training and after endurance racing: a prospective cohort study

description: Additional file 1: Dataset of gastrin, cortisol and CRP. The excel file contains the complete dataset of all variables used in the different analyses of serum gastrin, cortisol and C-reactive protein (CRP) in a group of Norwegian sled dogs.
DOI: 10.6084/m9.figshare.c.3603044_d3.v1
title: Additional file 2: of Is protection against florivory consistent with the optimal defense hypothesis?

description: Simulated Florivory Data. # of Flowers indicates the total number of flowers, and for each of the flower removal treatments (25, 50 and 75Â %) the total number of flowers removed follows each respective column. The total pods, seeds, and viable seeds are indicated below #fruit, #seeds, and #viable seeds. (XLSX 14 kb)
DOI: 10.5281/zenodo.14509251
title: PEDAGOGIK TA'LIM KLASTERI TA'LIM, FAN VA ISHLAB CHIQARISH INTEGRATSIYASINING AMALIY MEXANIZMI
DOI: 10.5281/zenodo.14509252
title: PEDAGOGIK TA'LIM KLASTERI TA'LIM, FAN VA ISHLAB CHIQARISH INTEGRATSIYASINING AMALIY MEXANIZMI
DOI: 10.6084/m9.figshare.c.3603272_d1.v1
title: Additional file 1: of Genetic characterization and improved genotyping of the dysferlin-deficient mouse strain Dysf
                     
                tm1Kcam

description: Supplementary material Dysftm1Kcam.txt; nucleotide sequence of the sequenced region as shown in Fig.Â  2b .
DOI: 10.6084/m9.figshare.c.3603263_d2.v1
title: Additional file 1: Table S1. of Transcriptional response to interferon beta-1a treatment in patients with secondary progressive multiple sclerosis

description: List of DEGs characterizing RRMS clinical responders. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.c.3603296_d1.v1
title: MOESM3 of Regulation of gene expression in the bovine blastocyst by colony stimulating factor 2

description: Additional file 3. Analysis of genes regulated by CSF2 using IPA. Shown are diseases or functions predicted to be increased or decreased as a result of CSF2 treatment for ICM (Tab 1) and TE (Tab 2) as well as transcriptional regulators functions predicted to be activated or inhibited by CSF2 in ICM (Tab 3) and TE (Tab 4). For all tabs, rows are highlighted (red, activated; green, inhibited) when the activation z-scoreÂ â ĽÂ 2.0.
DOI: 10.6084/m9.figshare.c.3603296_d2.v1
title: MOESM1 of Regulation of gene expression in the bovine blastocyst by colony stimulating factor 2

description: Additional file 1. Gene expression in ICM and TE as affected by CSF2. Tab 1: Gene expression in the ICM. Tab 2: Genes whose expression in the ICM was affected by CSF2 (P 1.5 or &lt;0.66 fold change). Note that genes highlighted in red (upregulated) or green (downregulated) were significantly upregulated by CSF2 after correcting for a 2 % false-discovery rate Tab 3: Gene expression in the TE. Tab 4: Genes whose expression in the TE was affected by CSF2 (P 1.5 or &lt;0.66 fold change). Coloring code is as for Tab 3. Tab 5: Genes that were regulated by CSF2 in both the ICM and TE.
DOI: 10.6084/m9.figshare.c.3603302_d1.v1
title: Additional file 1: of Motility characteristics in the transition zone in Gastroesophageal Reflux Disease (GORD) patients

description: The percentage of BT in patients with and without TZ defect. Description of data: The dataset displayed how many patients had complete or incomplete BT in patients with or without TZ defect in different groups. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3603296_d3.v1
title: MOESM2 of Regulation of gene expression in the bovine blastocyst by colony stimulating factor 2

description: Additional file 2. Annotation clusters of gene ontologies identified by DAVID for genes regulated by CSF2 in ICM (Tab 1) and TE (Tab 2). Only clusters having Benjamini-Hochberg adjusted P values &lt;0.05 are shown.
DOI: 10.6084/m9.figshare.c.3603461_d3.v1
title: Additional file 5: Table S4. of Identification of stromal ColXÎą1 and tumor-infiltrating lymphocytes as putative predictive markers of neoadjuvant therapy in estrogen receptor-positive/HER2-positive breast cancer

description: Cancer hallmarks gene sets enriched in positively or negatively correlated Col10A1 expression. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.c.3603467_d1.v1
title: Additional file 1: of Diagnosis of TIA (DOT) score â   design and validation of a new clinical diagnostic tool for transient ischaemic attack

description: Online supplement DOTS Calculator. (html 20.5 kb)
DOI: 10.6084/m9.figshare.c.3603458_d4.v1
title: MOESM1 of Composition and genomic organization of arthropod Hox clusters

description: Additional file 1: Table S1. Â Gene accession numbers or genomic locations of Hox genes used in this analysis.
DOI: 10.6084/m9.figshare.c.3603473_d1.v1
title: Additional file 4: Table S4. of Identification of expression patterns in the progression of disease stages by integration of transcriptomic data

description: Functional Enrichment Analyses of lists of genes included in the expression patterns found along the progressive stages of 3 diseases: MDS, AD, CRC. (A) Functional enrichment on terms from Gene Ontology Biological Process (GO-BP) for the 24 genes included in MDS pattern 1. (B) Functional enrichment on GO-BP terms for the 39 genes included in AD pattern 4; (C) Functional enrichment on GO-BP terms for the 168 genes included in CRC patterns 2, 3 and 4. (XLSX 15Â kb)
DOI: 10.6084/m9.figshare.c.3603473_d2.v1
title: Additional file 1: Table S1. of Identification of expression patterns in the progression of disease stages by integration of transcriptomic data

description: Significant genes found in the patterns associated to the progression of MDS: A total set of 189 genes were found. These genes are included in one of the 4 patterns identified (marked in red colors in the case of the 2 increasing trends or green colors in the case of the 2 decreasing trends). The Gamma correlation factor and the adjusted p-value of such correlation are included for each gene in its pattern. (XLSX 79Â kb)
DOI: 10.6084/m9.figshare.c.3603461_d7.v1
title: Additional file 1: Table S1. of Identification of stromal ColXÎą1 and tumor-infiltrating lymphocytes as putative predictive markers of neoadjuvant therapy in estrogen receptor-positive/HER2-positive breast cancer

description: Patient characteristics. x indicates the case was included for the assay. (XLSX 44 kb)
DOI: 10.6084/m9.figshare.c.3603473_d3.v1
title: Additional file 3: Table S3. of Identification of expression patterns in the progression of disease stages by integration of transcriptomic data

description: Significant genes found in the patterns associated to the progression of CRC: A total set of 243 genes were included in 4 patterns: 1 increasing and 3 decreasing. Each one of the four patterns is marked in a color (red colors in the case of increasing trends or green colors in the case of decreasing trends). The Gamma correlation factor and the adjusted p-value of such correlation are included for each gene in its pattern. (XLSX 25Â kb)
DOI: 10.6084/m9.figshare.c.3603458_d7.v1
title: MOESM3 of Composition and genomic organization of arthropod Hox clusters

description: Additional file 3: Table S5. Â  Number of BLAST hits, alignments, and sequences considered for conserved Hox gene-associated miRNAs in Mesobuthus, Metaseiulus, Tetranychus, and Strigamia.
DOI: 10.5517/ccdc.csd.cc294bwp
title: CCDC 2119342: Experimental Crystal Structure Determination

description: Related Article: Sujinda Petdee, Suangsiri Arunlimsawat, Teerapat Itsoponpan, Kasin Rueantong, Atthapon Saenubol, Pattarapapa Janthakit, Phattananawee Nalaoh, Taweesak Sudyoadsuk, Vinich Promarak|2024|Opt.Mater.|157|116413|doi:10.1016/j.optmat.2024.116413
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc294byr
title: CCDC 2119344: Experimental Crystal Structure Determination

description: Related Article: Sujinda Petdee, Suangsiri Arunlimsawat, Teerapat Itsoponpan, Kasin Rueantong, Atthapon Saenubol, Pattarapapa Janthakit, Phattananawee Nalaoh, Taweesak Sudyoadsuk, Vinich Promarak|2024|Opt.Mater.|157|116413|doi:10.1016/j.optmat.2024.116413
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3603473_d4.v1
title: Additional file 2: Table S2. of Identification of expression patterns in the progression of disease stages by integration of transcriptomic data

description: Significant genes found in the patterns associated to the progression of AD: In total 74 genes were found as significant assigned to one of the 4Â AD patterns. The patterns are marked in red colors in the case of increasing trends or green colors in the case of decreasing trends. The Gamma correlation factor and the adjusted p-value of such correlation are included for each gene in its pattern. (XLSX 13Â kb)
DOI: 10.5517/ccdc.csd.cc2cpyxy
title: CCDC 2195851: Experimental Crystal Structure Determination

description: Related Article: Qi Di, Marieh B. Al-Handawi, Liang Li, Panče Naumov, Hongyu Zhang|2024|Angew.Chem.,Int.Ed.|63|e202403914|doi:10.1002/anie.202403914
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3603458_d8.v1
title: MOESM5 of Composition and genomic organization of arthropod Hox clusters

description: Additional file 5. Muscle alignment of arthropod miRNAs mir-993, mir-10, and mir-iab-4/8. Abbreviations used as in Additional file 4: Figure S1.