cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.zdy559
title: Occurrence Download

description: A dataset containing 5375 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Sauromalus ater Duméril, 1856)",
 "Country is one of (Bermuda, Canada, Greenland, Saint Pierre and Miquelon, United States of America)"
 ]
}

 The dataset includes 5375 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016874-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vsdx6e
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Sauromalus ater Duméril, 1856)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016875-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.15580782
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250603c Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250603c Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.5281/zenodo.15580783
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS250603c Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS250603c Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.15468/dl.d3h364
title: Occurrence Download

description: A dataset containing 36448 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Streptomyces Waksman & Henrici, 1943"
 ]
}

 The dataset includes 36448 records from 425 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016873-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ytppgj
title: Occurrence Download

description: A dataset containing 1118 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Symphypleona",
 "Year 1999-2001",
 "Continent is Europe",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Occurrence evidence, Observation)"
 ]
}

 The dataset includes 1118 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049757-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fkburn
title: Occurrence Download

description: A dataset containing 109 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Actinidia chinensis",
 "Country is Netherlands",
 "HasCoordinate is true"
 ]
}

 The dataset includes 109 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049758-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u2tskd
title: Occurrence Download

description: A dataset containing 29198 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salpingus planirostris"
 ]
}

 The dataset includes 29198 records from 425 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049753-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nujyug
title: Occurrence Download

description: A dataset containing 92 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Conchopetalum brachysepalum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 92 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006477-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5524/102802
title: Supporting data for "Improved genome assembly of whale shark, the world's biggest fish: revealing intragenomic heterogeneity in molecular evolution"

description: This dataset was created to support a chromosome-level genome assembly of the whale shark (<i>Rhincodon typus</i>) and its evolutionary analyses. It includes scripts and data for sex chromosome characterization, comparative genomics, and molecular evolution analyses.
DOI: 10.6084/m9.figshare.31181920.v1
title: Benchmarking antibody discovery fidelity and reproducibility with an assay-locked residue fidelity index

description: Reproducibility in antibody discovery is undermined by dropout, paratope degeneracy, and immunogen imprinting. Although guidelines exist, the field lacks a shared, assay-locked metric to benchmark these liabilities across discovery pipelines. We propose the Residue Fidelity Index (RFI), a discovery-stage, within-assay comparative framework that consolidates fidelity liabilities into a single score. Assay-locked means RFI is comparable only within a fully specified assay configuration, uses fixed normalization and weights, and requires co-reporting of component metrics to expose drivers of the composite. RFI is not intended as a universal or optimal standard, but as one implementable example meeting basic benchmarking requirements: defined components, fixed assay context, pre-specified weights, and primary-data disclosure. RFI is reported alongside its components (D, G, I) to visualize reproducibility in parallel with affinity, humanization, and yield. To demonstrate feasibility, we applied RFI in a simulated Epivolve testbed derived from multiple studies, embedding MILKSHAKE (context retention) and Sundae (residue discrimination) validation modules into discovery. Across three campaigns (n = 25 clones), antibodies meeting provisional thresholds (dropout ≤10%, degeneracy ≤0.10, no imprinting) yielded RFI values from 0.610 to 0.982 (mean ± SD 0.922 ± 0.103; I = 1 for clones C04 and C20). These results show how fidelity can be consolidated to prioritize candidates before application-specific cellular validation. Despite limited scope and proprietary immunogens, this work provides a proof of concept for residue-level benchmarking, with per-clone primary values and RFI reported in Supplementary Table S1 for auditability. Residue Fidelity Index (RFI) consolidates dropout (D), degeneracy (G), and immunogen imprinting (I) comparative fidelity score. We illustrate the framework using simulated data from an Epivolve testbed, which integrates MILKSHAKE and Sundae assays into discovery, co-reporting D, G, I and the fixed weight set used to compute RFI. We report means; replicate-level CIs are not reported for this simulated cohort.
DOI: 10.6084/m9.figshare.31181920
title: Benchmarking antibody discovery fidelity and reproducibility with an assay-locked residue fidelity index

description: Reproducibility in antibody discovery is undermined by dropout, paratope degeneracy, and immunogen imprinting. Although guidelines exist, the field lacks a shared, assay-locked metric to benchmark these liabilities across discovery pipelines. We propose the Residue Fidelity Index (RFI), a discovery-stage, within-assay comparative framework that consolidates fidelity liabilities into a single score. Assay-locked means RFI is comparable only within a fully specified assay configuration, uses fixed normalization and weights, and requires co-reporting of component metrics to expose drivers of the composite. RFI is not intended as a universal or optimal standard, but as one implementable example meeting basic benchmarking requirements: defined components, fixed assay context, pre-specified weights, and primary-data disclosure. RFI is reported alongside its components (D, G, I) to visualize reproducibility in parallel with affinity, humanization, and yield. To demonstrate feasibility, we applied RFI in a simulated Epivolve testbed derived from multiple studies, embedding MILKSHAKE (context retention) and Sundae (residue discrimination) validation modules into discovery. Across three campaigns (n = 25 clones), antibodies meeting provisional thresholds (dropout ≤10%, degeneracy ≤0.10, no imprinting) yielded RFI values from 0.610 to 0.982 (mean ± SD 0.922 ± 0.103; I = 1 for clones C04 and C20). These results show how fidelity can be consolidated to prioritize candidates before application-specific cellular validation. Despite limited scope and proprietary immunogens, this work provides a proof of concept for residue-level benchmarking, with per-clone primary values and RFI reported in Supplementary Table S1 for auditability. Residue Fidelity Index (RFI) consolidates dropout (D), degeneracy (G), and immunogen imprinting (I) comparative fidelity score. We illustrate the framework using simulated data from an Epivolve testbed, which integrates MILKSHAKE and Sundae assays into discovery, co-reporting D, G, I and the fixed weight set used to compute RFI. We report means; replicate-level CIs are not reported for this simulated cohort.
DOI: 10.6084/m9.figshare.31228332
title: Use of knowledge translation frameworks to implement diagnosis of upper quadrant lymphedema clinical practice guideline to improve patient care

description: This knowledge translation (KT) descriptive study aimed to improve adherence to upper quadrant lymphedema clinical practice guideline (CPG) volume measurement recommendations. Physical therapists and leaders from 3-outpatient clinics who receive referrals for surveillance and treatment of cancer-related upper quadrant lymphedema were included in this 2-year descriptive study. The Knowledge to Action and Consolidated Framework for Implementation Research were used to improve fidelity and adherence to CPG recommended practices. Clinicians and leaders scored highly on readiness for change questions at baseline. Chart audits (<i>n</i> = 176) showed improvement in all fidelity metrics: use of consistent increment of circumference measures improved from 0% to 94%, bilateral measures 43% to 94%, follow-up circumference measures 60% to 77%, and use of evidence-based volume difference metrics for appropriate referral 0% to 80%. Adherence decreased over time, ranging between 33% to 90% at the last chart audit. There was variability in the changes to clinician knowledge and beliefs about lymphedema measures documented at the end of the project. This study demonstrated a feasible KT process to improve adherence to lymphedema measurement guidelines in outpatient clinics. Inconsistent adherence may impact clinical decision-making and limit patient access to appropriate care to manage this chronic condition. Lymphedema is a common debilitating condition experienced by patients with cancer.Diagnosis of upper quadrant lymphedema clinical practice guideline recommendations improve patient care but are not consistently implemented.A structured process that directly addresses barriers to implementation improves clinician adherence to clinical practice guideline recommended practices. Lymphedema is a common debilitating condition experienced by patients with cancer. Diagnosis of upper quadrant lymphedema clinical practice guideline recommendations improve patient care but are not consistently implemented. A structured process that directly addresses barriers to implementation improves clinician adherence to clinical practice guideline recommended practices.
DOI: 10.6084/m9.figshare.31228332.v1
title: Use of knowledge translation frameworks to implement diagnosis of upper quadrant lymphedema clinical practice guideline to improve patient care

description: This knowledge translation (KT) descriptive study aimed to improve adherence to upper quadrant lymphedema clinical practice guideline (CPG) volume measurement recommendations. Physical therapists and leaders from 3-outpatient clinics who receive referrals for surveillance and treatment of cancer-related upper quadrant lymphedema were included in this 2-year descriptive study. The Knowledge to Action and Consolidated Framework for Implementation Research were used to improve fidelity and adherence to CPG recommended practices. Clinicians and leaders scored highly on readiness for change questions at baseline. Chart audits (<i>n</i> = 176) showed improvement in all fidelity metrics: use of consistent increment of circumference measures improved from 0% to 94%, bilateral measures 43% to 94%, follow-up circumference measures 60% to 77%, and use of evidence-based volume difference metrics for appropriate referral 0% to 80%. Adherence decreased over time, ranging between 33% to 90% at the last chart audit. There was variability in the changes to clinician knowledge and beliefs about lymphedema measures documented at the end of the project. This study demonstrated a feasible KT process to improve adherence to lymphedema measurement guidelines in outpatient clinics. Inconsistent adherence may impact clinical decision-making and limit patient access to appropriate care to manage this chronic condition. Lymphedema is a common debilitating condition experienced by patients with cancer.Diagnosis of upper quadrant lymphedema clinical practice guideline recommendations improve patient care but are not consistently implemented.A structured process that directly addresses barriers to implementation improves clinician adherence to clinical practice guideline recommended practices. Lymphedema is a common debilitating condition experienced by patients with cancer. Diagnosis of upper quadrant lymphedema clinical practice guideline recommendations improve patient care but are not consistently implemented. A structured process that directly addresses barriers to implementation improves clinician adherence to clinical practice guideline recommended practices.
DOI: 10.6084/m9.figshare.30962489
title: Quercetin dilates retinal arterioles

description: Quercetin dilates retinal arterioles in rats
DOI: 10.6084/m9.figshare.30962489.v1
title: Quercetin dilates retinal arterioles

description: Quercetin dilates retinal arterioles in rats
DOI: 10.15468/dl.zcvqk8
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Cycas javana"
 ]
}

 The dataset includes 13 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006478-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14704962
title: Forex Exchange Rates Since 2004 (Updated Daily)
DOI: 10.15468/dl.fheyfy
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cubilia cubili",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 84 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006479-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18454471
title: Digitised, searchable Holle List in Stokhof (1980)

description: This repository contains the Cross-Linguistic Data Format (CLDF) dataset (Forkel et al. 2018) of the digitised, searchable Holle List (Holle 1894) in Stokhof (1980) (Rajeg 2023). Details and the interactive web version of the dataset can be accessed via https://engganolang.github.io/digitised-holle-list/.

The work in this repository is part of the AHRC-funded research on Lexical resources for Enggano, a threatened language of Indonesia (AH/W007290/1) (visit the central webpage of the Enggano language research at https://enggano.ling-phil.ox.ac.uk/)

Updates in version 1.5.1




Primary update: addressing issue #2 so that the CLDF dataset and the webpage can also be updated (#4) with commits between 1 Feb 2026 and 2 Feb 2026



The item/gloss-index with the "unspecified" marker (<unsp.>) in the Dutch gloss column (which then has several combining [e.g., IDa-IDc] or alternating/encompassing gloss-index [e.g., IDx/IDy]) is now given the English and Indonesian glosses by taking the individual English and Indonesian gloss(-indexes) (see Stokhof 1980: 19-21 for details) (see these changes in the holle-cldf.R script at 753b83e).

This update is exemplified under the Section 2.1 on the webpage (updates point 3)




Updating webpage (due to #1), also to include a citation and URL to the original Holle List published in 1894 (Holle 1894) (1a96408)



Some updates on the Concepticon mapping after the previous release (v1.4.1)



Project update on the digitalisation of the entire volumes of the regional Holle List in the Holle List GitHub repository



References

Forkel, Robert, Johann-Mattis List, Simon J. Greenhill, Christoph Rzymski, Sebastian Bank, Michael Cysouw, Harald Hammarström, Martin Haspelmath, Gereon A. Kaiping & Russell D. Gray. 2018. Cross-Linguistic Data Formats, advancing data sharing and re-use in comparative linguistics. Scientific Data. Nature Publishing Group 5(1). 180205. https://doi.org/10.1038/sdata.2018.205.

Holle, Karel Frederik. 1894. Blanco woordenlijst. Batavia: Landsdrukkerij. https://hdl.handle.net/2027/coo.31924023363215.

Rajeg, Gede Primahadi Wijaya. 2023. Digitised, searchable Holle List in Stokhof (1980). Dataset. University of Oxford. https://doi.org/10.25446/oxford.23205173

Stokhof, W. A. L. (ed.). 1980. Holle lists, vocabularies in languages of Indonesia, vol. 1: Introductory volume. Vol. Materials in Languages of Indonesia. Canberra, A.C.T., Australia: Dept. of Linguistics, Research School of Pacific Studies, The Australian National University. http://hdl.handle.net/1885/144430.
description: If you use this dataset, please cite the source document (Stokhof 1980) and the particular released version of this dataset (Rajeg 2023).
DOI: 10.57760/sciencedb.36406
title: N addition experiments in grasslands
title: N addition experiments in grasslands

description: Global meta-analysis on plant community and soil properties; Community data from a long-term N addition experiment in an alpine grassland
description: Global meta-analysis on plant community and soil properties; Community data from a long-term N addition experiment in an alpine grassland
DOI: 10.5281/zenodo.7972273
title: Digitised, searchable Holle List in Stokhof (1980)

description: This repository contains the Cross-Linguistic Data Format (CLDF) dataset (Forkel et al. 2018) of the digitised, searchable Holle List (Holle 1894) in Stokhof (1980) (Rajeg 2023). Details and the interactive web version of the dataset can be accessed via https://engganolang.github.io/digitised-holle-list/.

The work in this repository is part of the AHRC-funded research on Lexical resources for Enggano, a threatened language of Indonesia (AH/W007290/1) (visit the central webpage of the Enggano language research at https://enggano.ling-phil.ox.ac.uk/)

Updates in version 1.5.1




Primary update: addressing issue #2 so that the CLDF dataset and the webpage can also be updated (#4) with commits between 1 Feb 2026 and 2 Feb 2026



The item/gloss-index with the "unspecified" marker (<unsp.>) in the Dutch gloss column (which then has several combining [e.g., IDa-IDc] or alternating/encompassing gloss-index [e.g., IDx/IDy]) is now given the English and Indonesian glosses by taking the individual English and Indonesian gloss(-indexes) (see Stokhof 1980: 19-21 for details) (see these changes in the holle-cldf.R script at 753b83e).

This update is exemplified under the Section 2.1 on the webpage (updates point 3)




Updating webpage (due to #1), also to include a citation and URL to the original Holle List published in 1894 (Holle 1894) (1a96408)



Some updates on the Concepticon mapping after the previous release (v1.4.1)



Project update on the digitalisation of the entire volumes of the regional Holle List in the Holle List GitHub repository



References

Forkel, Robert, Johann-Mattis List, Simon J. Greenhill, Christoph Rzymski, Sebastian Bank, Michael Cysouw, Harald Hammarström, Martin Haspelmath, Gereon A. Kaiping & Russell D. Gray. 2018. Cross-Linguistic Data Formats, advancing data sharing and re-use in comparative linguistics. Scientific Data. Nature Publishing Group 5(1). 180205. https://doi.org/10.1038/sdata.2018.205.

Holle, Karel Frederik. 1894. Blanco woordenlijst. Batavia: Landsdrukkerij. https://hdl.handle.net/2027/coo.31924023363215.

Rajeg, Gede Primahadi Wijaya. 2023. Digitised, searchable Holle List in Stokhof (1980). Dataset. University of Oxford. https://doi.org/10.25446/oxford.23205173

Stokhof, W. A. L. (ed.). 1980. Holle lists, vocabularies in languages of Indonesia, vol. 1: Introductory volume. Vol. Materials in Languages of Indonesia. Canberra, A.C.T., Australia: Dept. of Linguistics, Research School of Pacific Studies, The Australian National University. http://hdl.handle.net/1885/144430.
description: If you use this dataset, please cite the source document (Stokhof 1980) and the particular released version of this dataset (Rajeg 2023).
DOI: 10.15468/dl.zm4v7s
title: Occurrence Download

description: A dataset containing 20869 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (, , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , Alternanthera philoxeroides, , , , , , , , , , , Lispe setuligera, , , , , , Mogiphanes philoxeroides, , Terniopsis yongtaiensis, , Alternanthera ebracteolata, , Phenrica littoralis, Hydrophylita neusae, , , Altica gravida, Achyranthes philoxeroides, Mogiphanes philorexoides, , Brandesia martiana, , , , , , , , , , , Alternanthera aphylla, , Alternanthera philoxerina, , , , , , Brandesia martiana, , , , , , , , Telanthera philoxeroides, , , , , , Achyranthes paludosa, , , , , , , , , Bucholzia philoxeroides, Celosia amphibia, , , , , , , Achyranthes aphylla, , , , , , Celosia amphibia, , , , , , , , , , )",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 20869 records from 305 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006480-260129131611470/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.