cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.mrauch
title: Occurrence Download

description: A dataset containing 8564 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "CoordinateUncertaintyInMeters 0.0-10000.0",
 "Geometry POLYGON((-83.38837 24.25008,-79.71122 24.25008,-79.71122 29.12741,-83.38837 29.12741,-83.38837 24.25008))",
 "TaxonKey is Iguana iguana (Linnaeus, 1758)"
 ]
}

 The dataset includes 8564 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007554-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15110751
title: Using Large Language Models to Document Code: A Quantitative and Qualitative Assessment - Replication Package
DOI: 10.5281/zenodo.15110752
title: Using Large Language Models to Document Code: A Quantitative and Qualitative Assessment - Replication Package
DOI: 10.15468/dl.rxsbwn
title: Occurrence Download

description: A dataset containing 915722 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "DatasetKey is EOD – eBird Observation Dataset",
 "OccurrenceStatus is Present",
 "Year 2007-2009"
 ]
}

 The dataset includes 915722 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007553-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u6dhge
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Camellia tachangensis F.C.Zhang"
 ]
}

 The dataset includes 15 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007557-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15110644
title: MATLAB source code used for Rigid Body Transformation processing and Q108R-atREA dataset(Lys-40, Gln-65, and Arg-108)

description: This dataset includes molecular dynamics (MD) simulation results of the Q108R-atREA complex, generated using the GROMACS package. It also provides MATLAB source code for Rigid Body Transformation (RBT) processing, enabling trajectory alignment and motion analysis. The dataset and code were used in our study to assess molecular motion consistency by incorporating both positional and orientational relationships.

Contents:





GROMACS simulation data for the Q108R-atREA complex (center of mass and dipole moment of Lys-40, Gln-65, and Arg-108)




MATLAB scripts for Rigid Body Transformation processing, including example usage for trajectory alignment
DOI: 10.5281/zenodo.15110645
title: MATLAB source code used for Rigid Body Transformation processing and Q108R-atREA dataset(Lys-40, Gln-65, and Arg-108)

description: This dataset includes molecular dynamics (MD) simulation results of the Q108R-atREA complex, generated using the GROMACS package. It also provides MATLAB source code for Rigid Body Transformation (RBT) processing, enabling trajectory alignment and motion analysis. The dataset and code were used in our study to assess molecular motion consistency by incorporating both positional and orientational relationships.

Contents:





GROMACS simulation data for the Q108R-atREA complex (center of mass and dipole moment of Lys-40, Gln-65, and Arg-108)




MATLAB scripts for Rigid Body Transformation processing, including example usage for trajectory alignment
DOI: 10.15468/dl.djdrxw
title: Occurrence Download

description: A dataset containing 161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Camellia sinensis var. assamica (J.W.Mast.) Kitam."
 ]
}

 The dataset includes 161 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007558-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15109415
title: Dynamic Prediction of Protein Physicochemical Properties Using 2DIR Spectroscopy with Machine Learning

description: This dataset provides supporting data for the related publication.It includes static and dynamic protein 2DIR spectra and physicochemical labels for ML prediction.
DOI: 10.5281/zenodo.15109416
title: Dynamic Prediction of Protein Physicochemical Properties Using 2DIR Spectroscopy with Machine Learning

description: This dataset provides supporting data for the related publication.It includes static and dynamic protein 2DIR spectra and physicochemical labels for ML prediction.
DOI: 10.15468/dl.43sa63
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Camellia costata S.Y.Hu & S.Y.Liang"
 ]
}

 The dataset includes 10 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007559-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fk3hsn
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Camellia crassicolumna Hung T.Chang"
 ]
}

 The dataset includes 21 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007561-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xpku9h
title: Occurrence Download

description: A dataset containing 5305 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-124.04519 26.88025,-73.68284 26.88025,-73.68284 44.70396,-124.04519 44.70396,-124.04519 26.88025))",
 "TaxonKey is Bromus tectorum L."
 ]
}

 The dataset includes 5305 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007560-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ka8wqw
title: Occurrence Download

description: A dataset containing 4559 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is North America",
 "DatasetKey is Observation.org, Nature data from around the World",
 "Geometry POLYGON((-138.62871 48.56073,-123.64257 48.56073,-123.64257 59.71621,-138.62871 59.71621,-138.62871 48.56073))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 4559 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007562-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nke6gb
title: Occurrence Download

description: A dataset containing 4559 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is North America",
 "DatasetKey is Observation.org, Nature data from around the World",
 "Geometry POLYGON((-138.62871 48.56073,-123.64257 48.56073,-123.64257 59.71621,-138.62871 59.71621,-138.62871 48.56073))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 4559 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007565-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tqeqbj
title: Occurrence Download

description: A dataset containing 546 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phocoena sinus Norris & McFarland, 1958"
 ]
}

 The dataset includes 546 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007568-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rhevmj
title: Occurrence Download

description: A dataset containing 8169589 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is UK Butterfly Monitoring Scheme (UKBMS)"
 ]
}

 The dataset includes 8169589 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007566-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kah764
title: Occurrence Download

description: A dataset containing 307 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "StateProvince is Texas",
 "TaxonKey is Setophaga chrysoparia (P.L.Sclater & Salvin, 1860)",
 "Year 2000-2000"
 ]
}

 The dataset includes 307 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007569-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48610/a240004
title: RsphCyc genome-scale metabolic model

description: This is a genome-scale metabolic model (GSMM) of C. sphaeroides ATCC 17025. The pathway-genome database, which serves as the source for this model, is available for reference on the BioCyc web portal. The primary central carbon metabolism of the model is curated, although it may include uncurated reactions related to other metabolic pathways, such as secondary metabolism. The RsphCyc model was quantitatively validated under photoautotrophic condition (biomass and protein yield), aerobic heterotrophic condition (biomass yield), and anaerobic photoheterotrophic condition (specific growth rate, hydrogen production rate, and polyhydroxybutanoate production rate).
DOI: 10.15468/dl.hquaw6
title: Occurrence Download

description: A dataset containing 2901 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Papilio paris Linnaeus, 1758"
 ]
}

 The dataset includes 2901 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007571-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3zjvwu
title: Occurrence Download

description: A dataset containing 20709 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Myxini"
 ]
}

 The dataset includes 20709 records from 226 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007572-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6qv9nz
title: Occurrence Download

description: A dataset containing 24831 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry MULTIPOLYGON(((83.50235 23.56362,88.50236 23.56362,93.50236 23.56362,93.50236 18.56362,98.50236 18.56362,103.50236 18.56362,103.50236 13.56362,103.50236 8.56362,103.50236 3.56362,103.50236 -1.43638,108.50236 -1.43638,113.50236 -1.43638,113.50236 3.56362,118.50236 3.56362,118.50236 8.56362,123.50236 8.56362,123.50236 13.56362,123.50236 18.56362,128.50236 18.56362,128.50236 23.56362,133.50236 23.56362,133.50236 28.56362,133.50236 33.56362,128.50236 33.56362,128.50236 38.56362,133.50236 38.56362,133.50236 43.56362,138.50236 43.56362,138.50236 48.56362,138.50236 53.56362,133.50236 53.56362,128.50236 53.56362,128.50236 58.56362,123.50236 58.56362,118.50236 58.56362,118.50236 53.56362,113.50236 53.56362,113.50236 48.56362,108.50236 48.56362,108.50236 43.56362,103.50236 43.56362,98.50236 43.56362,98.50236 48.56362,93.50236 48.56362,93.50236 53.56362,88.50236 53.56362,83.50235 53.56362,83.50235 48.56362,78.50235 48.56362,78.50235 43.56362,73.50235 43.56362,68.50235 43.56362,68.50235 38.56362,68.50235 33.56362,73.50235 33.56362,73.50235 28.56362,78.50235 28.56362,78.50235 23.56362,83.50235 23.56362)))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "LastInterpreted is greater than or equal to 2025-03-31",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 24831 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007573-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14085063
title: Digitalisation to improve automated agro-export logistics: Comprehensive bibliometric analysis

description: Introduction/objective: Digitalization in logistics transcended in the search for continuous improvement of good process optimization. This study aims to know the effectiveness of digitization implemented by companies to improve the automated logistics of cross-border trade in the agricultural sector.

Methodology: A bibliometric analysis was generated, exploring the evolution of the state of the art through Scopus, WOS and Dimensions databases, in order to select relevant empirical studies on digitization and automated logistics, using quality criteria and the application of the Prisma 2020 flowchart.

Results: Since 2017, there were signs of increased interest from researchers, highlighting authors such as Zoubek, Kumar and Ghobakhloo. This review provided insight into how digitization contributes to cost and time optimization in the logistics chain. Designing public policies allows a better integration of technology, such as IoT and AI. It identified 3 important blocks that have contributed to the effectiveness of digitization in automated logistics, they refer to “Impact of digitization on logistics efficiency and supply chain”, “Technology integration and automation in cross-border logistics” and “Governance, policy and social considerations in logistics digitization”.

Conclusions: Digitalization has been a fundamental element to improve logistics and make it autonomous within cross-border trade, allowing technology to get involved, integrating digital technologies such as artificial intelligence (AI), which reduced obstacles affecting the supply chain.
DOI: 10.5281/zenodo.14085064
title: Digitalización para mejorar la logística automatizada de la agroexportación: Análisis bibliométrico integral

description: Introducción/objetivo: La evolución de la digitalización en la logística ha transcendido en la búsqueda de la mejora continua de una buena optimización de procesos. Así que el objetivo es determinar cómo la evolución de la digitalización mejora la logística automatizada del comercio transfronterizo del sector agro.

Metodología: Se genero un análisis bibliométrico, explorando el tema a tratar gracias a las bases de datos de Scopus, WOS y Dimensions, con el fin de determinar el grado de relevancia de este tema en los últimos años.

Resultados: Desde el 2017 se observa que hay indicios de incremento de interés por parte de los investigadores, con pequeños declives como en el 2019, pero que luego son superados en años siguientes. Se ha identificado 3 bloques importantes a tratar que han contribuido a la evolución de la digitalización dentro de la logística, se refieren a “Impacto de la digitalización en la eficiencia logística y la cadena de suministro”, “Integración tecnológica y automatización en la logística transfronteriza” y “Gobernanza, políticas y consideraciones sociales en la digitalización logística”.  Los resultados demuestran que la digitalización no solo modifica las operaciones logísticas, sino que también destacan la importancia de la evolución digital en la logística transfronteriza

Conclusiones: La evolución de la digitalización ha sido un elemento fundamental para mejorar la logística y convertirla en autónoma dentro del comercio transfronterizo, esto ha permitido que la tecnología se involucre, implementándose tecnologías digitales como Inteligencia artificial (IA) con ello se reduce significativamente los obstáculos que afectaba a la cadena de suministro.
DOI: 10.5281/zenodo.14586064
title: Digitalisation to improve automated agro-export logistics: Comprehensive bibliometric analysis

description: Introduction/objective: Digitalization in logistics transcended in the search for continuous improvement of good process optimization. This study aims to know the effectiveness of digitization implemented by companies to improve the automated logistics of cross-border trade in the agricultural sector.

Methodology: A bibliometric analysis was generated, exploring the evolution of the state of the art through Scopus, WOS and Dimensions databases, in order to select relevant empirical studies on digitization and automated logistics, using quality criteria and the application of the Prisma 2020 flowchart.

Results: Since 2017, there were signs of increased interest from researchers, highlighting authors such as Zoubek, Kumar and Ghobakhloo. This review provided insight into how digitization contributes to cost and time optimization in the logistics chain. Designing public policies allows a better integration of technology, such as IoT and AI. It identified 3 important blocks that have contributed to the effectiveness of digitization in automated logistics, they refer to “Impact of digitization on logistics efficiency and supply chain”, “Technology integration and automation in cross-border logistics” and “Governance, policy and social considerations in logistics digitization”.

Conclusions: Digitalization has been a fundamental element to improve logistics and make it autonomous within cross-border trade, allowing technology to get involved, integrating digital technologies such as artificial intelligence (AI), which reduced obstacles affecting the supply chain.
DOI: 10.5281/zenodo.15110777
title: Digitalisation to improve automated agro-export logistics: Comprehensive bibliometric analysis

description: Introduction/objective: Digitalization in logistics transcended in the search for continuous improvement of good process optimization. This study aims to know the effectiveness of digitization implemented by companies to improve the automated logistics of cross-border trade in the agricultural sector.

Methodology: A bibliometric analysis was generated, exploring the evolution of the state of the art through Scopus, WOS and Dimensions databases, in order to select relevant empirical studies on digitization and automated logistics, using quality criteria and the application of the Prisma 2020 flowchart.

Results: Since 2017, there were signs of increased interest from researchers, highlighting authors such as Zoubek, Kumar and Ghobakhloo. This review provided insight into how digitization contributes to cost and time optimization in the logistics chain. Designing public policies allows a better integration of technology, such as IoT and AI. It identified 3 important blocks that have contributed to the effectiveness of digitization in automated logistics, they refer to “Impact of digitization on logistics efficiency and supply chain”, “Technology integration and automation in cross-border logistics” and “Governance, policy and social considerations in logistics digitization”.

Conclusions: Digitalization has been a fundamental element to improve logistics and make it autonomous within cross-border trade, allowing technology to get involved, integrating digital technologies such as artificial intelligence (AI), which reduced obstacles affecting the supply chain.
DOI: 10.15468/dl.bcmqvs
title: Occurrence Download

description: A dataset containing 1040 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is FungaCAT: Banco de datos de los hongos de Cataluña",
 "Geometry POLYGON((2.11568 41.49908,2.1154 41.49926,2.11566 41.49951,2.11559 41.49997,2.11528 41.50063,2.11508 41.50082,2.11484 41.50079,2.11466 41.5009,2.11413 41.50104,2.11359 41.5014,2.1135 41.50161,2.11254 41.50233,2.11165 41.50294,2.11108 41.50321,2.11147 41.5047,2.11104 41.5048,2.11022 41.50486,2.10952 41.50537,2.1093 41.50599,2.10916 41.50615,2.109 41.50632,2.10894 41.50669,2.10888 41.50672,2.10885 41.50665,2.10864 41.50652,2.10841 41.50655,2.10752 41.50708,2.1071 41.50735,2.10681 41.50745,2.10529 41.50632,2.1051 41.50652,2.10488 41.50664,2.10479 41.50687,2.10457 41.50705,2.1039 41.50734,2.10325 41.50758,2.10291 41.50786,2.10257 41.50813,2.10211 41.50787,2.10134 41.5083,2.09989 41.50871,2.09797 41.50882,2.09293 41.50851,2.09306 41.50584,2.093 41.50508,2.09281 41.5043,2.09234 41.50306,2.09108 41.50109,2.08779 41.49748,2.08768 41.49726,2.0886 41.49697,2.0889 41.49711,2.0893 41.49715,2.0897 41.49732,2.09056 41.49698,2.09073 41.49697,2.0909 41.49714,2.09111 41.4972,2.09403 41.49677,2.09394 41.49622,2.09434 41.49589,2.09428 41.49559,2.09469 41.49573,2.09511 41.49556,2.09541 41.49523,2.09535 41.49482,2.09517 41.49458,2.09493 41.49437,2.09559 41.49401,2.0966 41.49327,2.09697 41.49314,2.09695 41.49301,2.09812 41.49345,2.09919 41.49373,2.10021 41.49373,2.10126 41.49364,2.10229 41.49361,2.10366 41.49373,2.10526 41.49401,2.10719 41.49449,2.10901 41.49509,2.11009 41.49549,2.11185 41.49646,2.11387 41.49772,2.11462 41.49827,2.11568 41.49908))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 1040 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007574-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qhw3vg
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((18.10299 -34.64763,19.29833 -34.64763,19.29833 -33.23245,18.10299 -33.23245,18.10299 -34.64763))",
 "TaxonKey is Hydrophis platurus (Linnaeus, 1766)"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007575-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e9g7mh
title: Occurrence Download

description: A dataset containing 228 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "StateProvince is Texas",
 "TaxonKey is Setophaga chrysoparia (P.L.Sclater & Salvin, 1860)",
 "Year 2024-2024"
 ]
}

 The dataset includes 228 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007576-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.