cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0076073.10fu
title: SH0076073.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive8043.20250331.9.3
title: Catelliglobosispora koreensis (Lee et al. 2000) Ara et al. 2008 emend. Nouioui et al. 2018

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive8043.20251217.10
title: Catelliglobosispora koreensis (Lee et al. 2000) Ara et al. 2008 emend. Nouioui et al. 2018

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0076074.10fu
title: SH0076074.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive8044.20250331.9.3
title: Hamadaea tsunoensis (Asano et al. 1989) Ara et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0076075.10fu
title: SH0076075.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive8044.20251217.10
title: Hamadaea tsunoensis (Asano et al. 1989) Ara et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive8045.20250331.9.3
title: Plantactinospora mayteni Qin et al. 2009 emend. Zhu et al. 2012

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0076076.10fu
title: SH0076076.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive8045.20251217.10
title: Plantactinospora mayteni Qin et al. 2009 emend. Zhu et al. 2012

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15468/dl.gvbf9p
title: Occurrence Download

description: A dataset containing 107792 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Ichthyology Collection - Royal Ontario Museum"
 ]
}

 The dataset includes 107792 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020791-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9wsjwx
title: Occurrence Download

description: A dataset containing 10806 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Connochaetes taurinus (Burchell, 1823)"
 ]
}

 The dataset includes 10806 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020795-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13858069
title: Old repository

description: This Excel file contains a detailed list of all articles excluded from a systematic review.
DOI: 10.5281/zenodo.13858070
title: Old repository

description: This Excel file contains a detailed list of all articles excluded from a systematic review.
DOI: 10.15468/dl.86cg3v
title: Occurrence Download

description: A dataset containing 1143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is one of (Colombia, Brazil, Peru, Ecuador, Bolivia (Plurinational State of))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Boana fasciata (Günther, 1858)"
 ]
}

 The dataset includes 1143 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002135-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xaahj4
title: Occurrence Download

description: A dataset containing 2728 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Bougainvillea glabra Choisy)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 2728 records from 239 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002176-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2dhq27
title: Occurrence Download

description: A dataset containing 31985 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Carduus acanthoides L.)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation, Literature Occurrence)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 31985 records from 236 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002136-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v3n822
title: Occurrence Download

description: A dataset containing 64506 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lithobates sylvaticus (LeConte, 1825)",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 64506 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002112-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13777860
title: IRIS: Industrial Room In Saclay

description: IRIS is a new dataset providing a dense station-based LiDAR point cloud and a CAD model reconstructed close to the points in a semi-automatic way. The scene is a large industrial room (530m²) containing objects of different shapes, colors and sizes such as pipes, valves, pumps and gauges. Due to the complex environment, this dataset is challenging for many computer vision tasks.

More details are given on the dataset page.

IRIS data



point_cloud_stations_01 to 14.zip: the raw point cloud of the entire scene with very high density. In total 67 files, one per station acquisition, and more than 2.1 billion points.

point_cloud_stations_info.zip: the stations information. It includes the position in the scene (translation vector), and orientation (rotation vector and angle).

point_cloud_stations_merged_zoneA to C_density_10%.ply: subparts covering in total 30% of the whole scene. Multiple station clouds have been merged. The density is 10 times lower than in the original original cloud. The resulting clouds are still dense.

mesh_from_cad_model.ply: the mesh extracted from the cad model. It gives a surface of the cloud with high accuracy (see dataset page for more details).


IRIS-VIS data

IRIS-VIS is a dataset specifically designed for the point visibility estimation task. iris-vis.zip contains all the data. More details are given on the IRIS-VIS paper page.



The folder show contains:



an example of the visibility ground truth (see paper for the ground truth construction).

an example of the complex visibility areas (see paper).

visualizations of the corrected mesh from the CAD model on a pipe and a valve (see paper).



ZoneA, B and C are the same scenes as in IRIS. They are used for the quantitative experiments. Each scene includes:



3 viewpoints.

for two densities (2% and 10% of the raw point cloud):



the input cloud (paired with the cad model).

for each viewpoint: the visibility ground truth cloud and indices (computed from the cad model).

for each viewpoint: the cloud and indices of the complex areas (computed from the ground truth).





ZoneA.1 and A.2 are two subscenes of the zoneA used for the qualitative visualizations. They include:



1 viewpoint (the same for A.1 and A.2).

the same data as for the scenes A, B and C (see above), including the raw and input clouds for the visibility estimation task.

the visibility prediction cloud and indices for each method.

the visibility evaluation cloud for each method: the prediction cloud merged with the ground truth cloud and colorised according to true positive (blue), false positive (purple), false negative (orange).

the camera parameters used for Vis2mesh.
DOI: 10.5281/zenodo.13777859
title: IRIS: Industrial Room In Saclay

description: IRIS is a new dataset providing a dense station-based LiDAR point cloud and a CAD model reconstructed close to the points in a semi-automatic way. The scene is a large industrial room (530m²) containing objects of different shapes, colors and sizes such as pipes, valves, pumps and gauges. Due to the complex environment, this dataset is challenging for many computer vision tasks.

More details are given on the dataset page.

IRIS data



point_cloud_stations_01 to 14.zip: the raw point cloud of the entire scene with very high density. In total 67 files, one per station acquisition, and more than 2.1 billion points.

point_cloud_stations_info.zip: the stations information. It includes the position in the scene (translation vector), and orientation (rotation vector and angle).

point_cloud_stations_merged_zoneA to C_density_10%.ply: subparts covering in total 30% of the whole scene. Multiple station clouds have been merged. The density is 10 times lower than in the original original cloud. The resulting clouds are still dense.

mesh_from_cad_model.ply: the mesh extracted from the cad model. It gives a surface of the cloud with high accuracy (see dataset page for more details).


IRIS-VIS data

IRIS-VIS is a dataset specifically designed for the point visibility estimation task. iris-vis.zip contains all the data. More details are given on the IRIS-VIS paper page.



The folder show contains:



an example of the visibility ground truth (see paper for the ground truth construction).

an example of the complex visibility areas (see paper).

visualizations of the corrected mesh from the CAD model on a pipe and a valve (see paper).



ZoneA, B and C are the same scenes as in IRIS. They are used for the quantitative experiments. Each scene includes:



3 viewpoints.

for two densities (2% and 10% of the raw point cloud):



the input cloud (paired with the cad model).

for each viewpoint: the visibility ground truth cloud and indices (computed from the cad model).

for each viewpoint: the cloud and indices of the complex areas (computed from the ground truth).





ZoneA.1 and A.2 are two subscenes of the zoneA used for the qualitative visualizations. They include:



1 viewpoint (the same for A.1 and A.2).

the same data as for the scenes A, B and C (see above), including the raw and input clouds for the visibility estimation task.

the visibility prediction cloud and indices for each method.

the visibility evaluation cloud for each method: the prediction cloud merged with the ground truth cloud and colorised according to true positive (blue), false positive (purple), false negative (orange).

the camera parameters used for Vis2mesh.
DOI: 10.15468/dl.rnf3qz
title: Occurrence Download

description: A dataset containing 24964 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Brachypodium distachyon (L.) P.Beauv.)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 24964 records from 408 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002177-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xpt93s
title: Occurrence Download

description: A dataset containing 118272 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Salix purpurea L.)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation, Literature Occurrence)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 118272 records from 772 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002132-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111110274
title: Votive, cone, UT 1599-4

description: [Text Description:] Votive, cone-shaped temple offering. ❧ [Text or Publication Number Note:] UT 1599-4 ❧ [Excavation Description:] Warka ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Beige clay cone, smaller of the two cones. LABEL: "4" in pencil; "P" in thick black marker. 2 x 5cm.
DOI: 10.15468/dl.c6q4c3
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Microzooplankton abundance and biomass at station NBP97-08-05-1"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0189756-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111110275
title: Votive, cone, UT 1599-4

description: [Text Description:] Votive, cone-shaped temple offering. ❧ [Text or Publication Number Note:] UT 1599-4 ❧ [Excavation Description:] Warka ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Beige clay cone, smaller of the two cones. LABEL: "4" in pencil; "P" in thick black marker. 2 x 5cm.
DOI: 10.15468/dl.8trxvr
title: Occurrence Download

description: A dataset containing 195 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cirsium vlassovianum Fisch. ex DC.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 195 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0265446-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111110197
title: Votive, cone, UT 1599-4

description: [Text Description:] Votive, cone-shaped temple offering. ❧ [Text or Publication Number Note:] UT 1599-4 ❧ [Excavation Description:] Warka ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Beige clay cone, smaller of the two cones. LABEL: "4" in pencil; "P" in thick black marker. 2 x 5cm.
DOI: 10.25549/inscriptifact-ouc111108908
title: Contract with list of merchandise, UT 1599-2

description: [Text Description:] Contract with list of merchandise: cargo of a canal boat. ❧ [Text or Publication Number Note:] UT 1599-2 ❧ [Excavation Description:] Jokha ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Rectangular clay tablet, uniform beige color with white and pink. LABEL: "1599" in black ink, "2" in red ink. Broken and repaired. 10.5 x 4.5cm. ❧ [Physical Object Note:] Reign of Amar-Sin, third dynastic king.
DOI: 10.15468/dl.8zvffv
title: Occurrence Download

description: A dataset containing 4303 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Oecetis testacea (Curtis, 1834), Perlodes intricatus (Pictet, 1841))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 4303 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0157416-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zc45jk
title: Occurrence Download

description: A dataset containing 73852 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Dama dama (Linnaeus, 1758)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 73852 records from 210 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061489-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/inscriptifact-ouc111108961
title: Contract with list of merchandise, UT 1599-2

description: [Text Description:] Contract with list of merchandise: cargo of a canal boat. ❧ [Text or Publication Number Note:] UT 1599-2 ❧ [Excavation Description:] Jokha ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Rectangular clay tablet, uniform beige color with white and pink. LABEL: "1599" in black ink, "2" in red ink. Broken and repaired. 10.5 x 4.5cm. ❧ [Physical Object Note:] Reign of Amar-Sin, third dynastic king.
DOI: 10.25549/inscriptifact-ouc111109027
title: Contract with list of merchandise, UT 1599-2

description: [Text Description:] Contract with list of merchandise: cargo of a canal boat. ❧ [Text or Publication Number Note:] UT 1599-2 ❧ [Excavation Description:] Jokha ❧ [Medium:] Clay ❧ [Script Note:] Cuneiform, Non-Alphabetic ❧ [Physical Object Description:] Rectangular clay tablet, uniform beige color with white and pink. LABEL: "1599" in black ink, "2" in red ink. Broken and repaired. 10.5 x 4.5cm. ❧ [Physical Object Note:] Reign of Amar-Sin, third dynastic king.
DOI: 10.25825/fk2/veo88p
title: CPRS Public Opinion Poll 11 - August 1994 | مركز البحوث والدراسات الفلسطينية، استطلاع الرأي رقم 11 - آب/أغسطس 1994

description: This is the eleventh public opinion poll conducted by the Survey Research Unit (SRU) at the Center for Palestine Research and Studies. This poll focuses on freedom of the press, Palestinian-Jordanian relations, Jerusalem, and elections.