cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/6xjc4c4nd9
title: WJTD-2020-0995

description: Data underlying the study entitled "The relationship between experiential avoidance and posttraumatic stress symptoms: A moderated mediation model involving dissociation, guilt, and gender".
DOI: 10.17632/8kx9x339y4
title: Supporting data: RSPA-2024-0118

description: Data and source codes supporting the reproduction of the results in article RSPA-2024-0118, Plug- and-play analytical paradigm for the scattering of plane waves by ``layer-cake'' periodic systems, by P. Salasiya, S. Meng and B.B. Guzina.
DOI: 10.17632/93hkxwdzrk
title: Dataset for "A Novel In Vivo Radio Channel Study Targeting on Power Saving for Ruminal Health Monitoring Boluses"

description: Dataset for long-duration observation of path loss, digestive activities, and animal behaviours.
DOI: 10.17632/cjyv2mdndn
title: Data for: Hydrocarbon generation-retention-expulsion mechanism and shale oil producibility of the Permian Lucaogou shale in the Junggar Basin as simulated by semi-open pyrolysis experiments

description: This is the mass balance of my research.
DOI: 10.17632/h6snst5hm8
title: Effect of High NEFA Concentration on Lipid Metabolism Disorders in Hepatocytes Based on lipidomics

description: Fatty liver is a common nutritional metabolic disease in periparturient dairy cows, which seriously affects their reproductive performance. During periparturient period, dairy cows are in a state of negative energy balance because they cannot meet the nutritional requirements for maintenance and lactation. As a result, non-esterified fatty acids (NEFA) are mobilized from adipose tissue, leading to an increase in NEFA concentration in the blood. When the rate of NEFA esterification into triglycerides (TAG) exceeds the rate of NEFA processing, fatty liver will form. Existing studies suggest that NEFA is closely associated with lipid metabolism disorders in hepatocytes, but it is not clear through which metabolites or metabolic pathways NEFA affects lipid metabolism disorders in hepatocytes. Therefore, the aim of this study was to investigate the effect of high concentration of NEFA on lipid metabolism in hepatocytes through the lipidomic approach and molecular biology techniques. Here, we found that NEFA (0.6-2.4 mM) significantly reduced the cell viability in a concentration-dependent manner, indicating that high concentrations of NEFA have lipotoxicity on hepatocytes. In addition, NEFA promoted TAG accumulation, increased the mRNA expression of the lipogenic molecules SREBP and FASN, and decreased the mRNA expression of lipolytic molecules CPT1A and HSL in hepatocytes. Mechanistically, the results of lipidomics analysis further showed that NEFA induced lipid metabolism disorders in hepatocytes by regulating metabolic pathways such as glycerol phospholipid metabolism, glycosyl phosphatidylinositol anchored biosynthesis, triglyceride metabolism, sphingolipid metabolism, and inositol phosphate metabolism.
DOI: 10.17632/jrrz2j7dbs
title: Data for: A hydrogeochemical approach to improve environmental water quality standards and management in the overlap between high mountainous natural protected areas and copper mining activities (Mapocho river upper basin, Santiago, Chile)

description: Water Quality datsa of the MApocho Upper Basin (Chile)
DOI: 10.17632/jx6b58kfyy
title: Data for: Carbon nanobracelets

description: Folder "pure carbon" contains raw data for pure carbon nanobracelets made of 1-5 monomer fragments. Folder "with hydrogen" contains raw data for nanobracelets with hydrogen made of 1-5 monomer fragments. ARC files - result of PM3 optimization by MOPAC2016 with symmetry constraints, OUT files - result of DFT optimization by PRIRODA which uses for input configuration the PM3 pre-optimized geometry, PNG files - visualization of DFT optimized geometry by Chemcraft software, XLS files - calculation of the molecule outer radius and the variation of bond lengths in chains by Eq. (1). File "Kekule variation.xls" contains details of calculation by Eq. (1) of the bond length variation in ground state (6,0) nanotube with Kekule-type bond alternation.
DOI: 10.17632/pxms35mv84
title: Ge/Al and Ge/Si3N4/Al core/shell quantum dot lattices in alumina: boosting the spectral response by tensile strain

description: Data showing structural and opto-electronic properties of thin film materials consisting of regularly ordered core/shell Ge/Al and Ge/Si3N4/Al quantum dots (QDs) in an alumina matrix
DOI: 10.17632/s6622ttnbb
title: EPA survey

description: Survey results
DOI: 10.17632/sjkwn9gvfb
title: Data for: Geochemistry of aeolian material from the McMurdo Dry Valleys, Antarctica: insights into Southern Hemisphere dust sources

description: Geochemistry of aeolian (wind-blown) materials from the McMurdo Dry Valleys, Antarctica. These materials were analyzed for major oxide, trace element, and rare earth element abundances. A three-component mixing model is also included to help delineate source contributions.
DOI: 10.17632/v59gnk2rs6
title: Hydrous wadsleyite crystal structure and symmetric hydrogen bonding in the mantle

description: The transition zone acts as a geochemical filter to mantle material passing through the 410 and 660 km seismic discontinuities. The high water storage capacity of wadsleyite, Mg2SiO4, an abundant transition zone mineral, therefore plays an important role in the global water cycle. Hydration of wadsleyite by (OH)- associated with cation defects is well known to influence its physical and mechanical properties, however an atomic-scale understanding of the structure and hydrogen bonding at high pressures is needed to interpret the influence of water on the behavior of wadsleyite in the mantle transition zone. We have determined the pressure evolution of the wadsleyite crystal structure, lattice symmetry, and hydrogen-bond distances up to 35 GPa using single-crystal X-ray diffraction on well-characterized, Fe-bearing samples containing ~0.25 and ~2.0 wt.% H2O. Both compositions undergo a linear increase in the monoclinic distortion from orthorhombic symmetry above 10 GPa, with the less hydrous sample showing a greater increase in distortion on further compression. Although the proton positions cannot be modeled from the experimental data, the evolution of the primary hydrogen bond in the structure was monitored by the behavior of the O1–H…O4 hydrogen bond lengths along the M3 octahedron during compression. Above about 25 GPa, the hydrogen bond undergoes a transition to being completely incompressible, which is not observed in other O-O interatomic distances. We interpret this change in compression behavior as resulting from symmetrization of the hydrogen bond in wadsleyite. The observed strengthening of the hydrogen bond in wadsleyite has implications for the partitioning of hydrogen isotopes in the mantle transition zone.
DOI: 10.17632/vxcjwcj48k
title: Data for: A Further Analysis of Manning and Fink (2020)

description: Excel and do files
DOI: 10.17632/y6ygpt4375
title: Spatial organizations of heterochromatin contribute to nuclear structural integrity of ventricular cardiomyocytes against mechanical stress. Fujiwara K et al.

description: raw Western blot pictures
DOI: 10.17632/3sdsc83vsn
title: Genome-Scale Exon Perturbation Screens Uncover Exons Critical for Cell Fitness

description: CRISPR-Cas technology has transformed functional genomics, yet understanding how individual exons differentially shape cellular phenotypes remains limited. Here, we optimized and conducted massively parallel exon deletion and splice site mutation screens in human cell lines to identify exons that regulate cellular fitness. Fitness-promoting exons are prevalent in essential and highly expressed genes, and commonly overlap with protein domains and interaction interfaces. Conversely, fitness-suppressing exons are enriched in non-essential genes, exhibiting lower inclusion levels, and overlap with intrinsically disordered regions and disease-associated mutations. In-depth mechanistic investigation of the TAF5 alternative exon-8, screen hit, revealed that its inclusion is required for assembly of the TFIID general transcription initiation complex, thereby regulating global gene expression output. Collectively, our orthogonal exon perturbation screens established a comprehensive repository of phenotypically important exons and uncovered regulatory mechanisms governing cellular fitness and gene expression.
DOI: 10.17632/8583c8w6f9
title: LINF_260019700

description: farnesyltransferase beta subunit
Leishmania infantum (strain JPCM5)
DOI: 10.17632/8c82s62kky
title: Factors affecting cross-language activation and language mixing in bilingual aphasia: A case study

description: We present data from a single bilingual individual with aphasia, whose speech was prone to language-mixing behaviours. We designed a picture naming task with 3 different conditions: monolingual, bilingual, and subsequent-retrieval (called "switch" in the datafile). We investigated the influence of language mode, language, task, and a continuous measure of cognateness on accuracy, response time and language selection errors. Data includes the participant's transcribed responses on 1500 trials (250 for each condition in each language), coded for accuracy and response type, with response times for accurate responses. Data also includes values of individual psycholinguistic variables.
DOI: 10.17632/c74ky2jy3v
title: Data for: An assessment of gas void fraction prediction models in highly-viscous liquid and gas two-phase vertical flows
DOI: 10.17632/fkh5bds9v6
title: Data for: Pore characteristics of the carbonate shoal from fractal perspective
DOI: 10.17632/mxjt9nhgmj
title: Supplementary Acknowledgements Table

description: Supplementary Acknowledgements Table for "Rapid and parallel adaptive mutations in spike S1 drive clade success in SARS-CoV-2"- Kistler et al 2022, Cell Host and Microbe. This table contains information about the sequences used in this study, such as the authors and accession numbers.
DOI: 10.17632/p6j5c2g86y
title: Active methane release in the early Cambrian seafloor

description: These data are generated by the study submitted to Geochimica et Cosmochimica Acta with the same title.
DOI: 10.17632/wdpz9zxnvt
title: Kunning Granules

description: The formula, the Preparation Method, quality control, reference fingerprint of Kunning Granules.
DOI: 10.17632/ys2m85n3jz
title: ASR

description: literature review
DOI: 10.17632/2549m67dgb
title: LDHU3_15.0360

description: LysRS | Lysyl-tRNA synthetase; Leishmania donovani (HU3 strain)
DOI: 10.17632/6v5mxxvdxh
title: Preconception diet interventions in obese outbred mice and the impact on female offspring metabolic health and oocyte quality

description: This dataset contains raw data of the manuscript entitled "Preconception diet interventions in obese outbred mice and the impact on female offspring metabolic health and oocyte quality".
DOI: 10.17632/6w9mmrk6y3
title: R-code and data from: Contrasting effects of amino acid types on foraging behaviour, colony growth, and worker mortality in red ants and carpenter ants

description: This data set is a supplement to an article titled: “Contrasting effects of amino acid types on foraging behaviour, colony growth, and worker mortality in red ants and carpenter ants”. We investigated foraging responses of ants to essential proteogenic amino acids (amino acids which cannot be synthesized by the host animal) compared to non-essential amino acids and their associated effects on colony growth in ants. Our full description of the methodology, results, and their interpretation can be found in the publication.

Abstract from article: 
"Foraging ants collect amino acids and proteins for developing larvae in their colony. Both essential amino acids (EAAs; some considered toxic to ants) and non-essential amino acids (non-EAAs) are important building blocks of proteins but EAAs cannot be synthesized by animals and must be obtained from their diet. Whether ants specifically forage for EAAs, and how EAAs affect ant colony growth, has rarely been investigated. Using red ants, Myrmica rubra, and western carpenter ants, Camponotus modoc, as model species, we tested the hypotheses that (1) M. rubra and C. modoc colonies with brood preferentially forage for EAAs rather than non-EAAs; (2) M. rubra colonies provisioned with EAAs, instead of non-EAAs, have greater brood production and colony growth; and (3) M. rubra workers feeding on sucrose and EAAs die sooner than workers feeding on sucrose and non-EAAs (which are considered less toxic). In laboratory choice experiments, colonies of M. rubra and C. modoc preferentially foraged for EAAs rather than non-EAAs. Colonies of M. rubra that consumed both EAAs and non-EAAs, produced more larvae, but not more workers and queens, than colonies that consumed only EAAs or non-EAAs. In a mortality experiment, isolated M. rubra workers that consumed sucrose and EAAs died sooner than workers that consumed sucrose and non-EAAs, possibly because they could not feed EAAs to larvae. Our results indicate that EAAs on their own, while critically important, are insufficient for ant colony growth. However, sucrose and EAAs as key macro-nutrients should be offered in highly appealing baits for control of pest ants."

We have uploaded our data and scripts as an R studio project. Code used to wrangle data, analyze data and generate plots can be accessed in the project folder by opening the project file. The project contains: 

---Data
Data files of laboratory experiments to assess ant consumption, colony growth, and mortality to amino acid formulations.
 
---Outputs
Plots and csv files generated from data analysis.

---Scripts
Scripts of R code used to wrangle data, conduct analyses, and generate outputs.
DOI: 10.17632/b574ys8yts
title: Raw data of song samples of prinia inornata

description: Raw data of song samples of prinia inornata between invaded and native habitats
DOI: 10.17632/bpxcvp63rm
title: Evaluaciones externas en América Latina procesos logísticos. El caso de Argentina

description: Documentos en el que además de un panorama general sobre el contexto internacional determinante de decisiones en materia evaluativa, hay una contextualización general de cada país objeto de estudio. En este último generalidades necesarias sobre el sistema evaluativo, con un panorama sobre los ciclos educativos y con detalles sobre aquellos en los cuales se efectúa la evaluación externa. Igualmente, se presentan las características de éstas evaluaciones ofreciendo información detallada acerca de cómo se diseñan, planifican y aplican, ofreciendo mayores detalles en aquello que ocurre con los resultados: divulgación y uso.
DOI: 10.17632/bryhxdfxvd
title: Lead isotope fingerprinting techniques help identify and quantify 3,000 years of atmospheric lead pollution from Laguna Roya, northwestern Iberia Supplemental

description: Until ~1960 CE the primary source of anthropogenic Pb in the Laguna Roya sediment record was atmospheric Pb pollution from distant, largescale metal refining in the SW.
Dated slag Pb isotope ratios from the Rio Tinto mining district provided strong evidence to identify the source of Pb pollution in Laguna Roya sediments. 
The primary source of lake sediment Pb pollution after 1960 CE is metal processing from the SW mining district (~85%) whereas leaded gasoline contributes ~15%.
DOI: 10.17632/sf74hptxht
title: Table 1- A list of interacting proteins for AURKB

description: Table 1- A list of interacting proteins for AURKB.
DOI: 10.17632/xcd89fx922
title: Community Sport Interviews

description: Interviews conducted with community sport clubs relating to policy implementation and advocacy for community sport
DOI: 10.17632/z65pf6xs5s
title: PPL-2021-00295 MALDI-TOF-MS and PFM

description: MALDI-TOF-MS and PMF for proteomic analysis of vetiver grass in response to acid mine drainage.
DOI: 10.17632/3s9nmvhvhm
title: data

description: The data is of 2D materials piezoelectricity properties .
DOI: 10.17632/3zvkvym5v2
title: Cojets 5.12: A Monte Carlo simulation program for p -p and p-p collisions

description: Abstract An updated version of the Monte Carlo program COJETS is presented. The program simulates p -p and p-p interactions at high energy. It covers: (i) purely hadronic production, including particles with charm, bottom and top; (ii) weak Drell-Yan production of the W and Z vector bosons; (iii) electromagnetic Drell-Yan production of charged lepton pairs. The simulation is based, at the parton level, on perturbative QCD and the Weinberg-Salam model. Partons are independently frag... Title of program: COJETS Catalogue Id: AAVR_v2_0 [ABRM] Nature of problem Simulation of QCD and the Weinberg-Salam Model in antiproton-proton and proton-proton interactions. Versions of this program held in the CPC repository in Mendeley Data AAVR_v1_0; COJETS; 10.1016/0010-4655(84)90067-5 AAVR_v2_0; COJETS; 10.1016/0010-4655(90)90094-H AAVR_v3_0; COJETS 6.23; 10.1016/0010-4655(92)90151-N This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/5gjs39cj6k
title:  A study of Iron derived from ferritinophagy causes retinal pigment epithelium senescence via cGAS–STING. Hong-Ying Li et al.

description: A study of Iron derived from ferritinophagy causes retinal pigment epithelium senescence via cGAS–STING.
DOI: 10.17632/7bw67mv9jb
title: Elevated vitamin D levels in diurnally-active female fruit bats

description: data + codes
DOI: 10.17632/7r64ftck8v
title: Data associated with Use of a head-to-tail peptide cyclase to prepare hybrid RiPPs. Chem Commun. 2024

description: Data associated with the figures in Use of a head-to-tail peptide cyclase to prepare hybrid RiPPs. Chem Commun 2024
DOI: 10.17632/92ykngb24t
title: Inhibitory Effects of Syzygium jambos Extract on Biomarkers of Endothelial Cell Activation

description: Background: Disordered endothelial cell activation plays an important role in the pathophysiology of atherosclerosis, cancer, sepsis, viral infections, and inflammatory responses. There is interest in developing novel therapeutics to regulate endothelial cell function in atherothrombotic, metabolic, vascular, and hematological diseases. Extracts from leaves of the Syzygium jambos (L.) Alston (S. jambos) trees have been proposed to treat cardiovascular diseases and diabetes through unclear mechanisms. We investigated the effects of the S. jambos extract on biomarkers of endothelial dysfunction and immune responses in the human endothelial cell line, EA.hy926. 
Methods: Leaves of S. jambos were collected, concocted and lyophilized. To study the effects of S. jambos on endothelial cell activation, we used the human endothelial cell line. IL-6 levels were measured using qPCR and ELISA. PDI activity was measured using Insulin Turbidity and Di-E-GSSG assays. CM-H2DCFDA was used to study ROS levels. Migration assay was used to study S. jambos effect on ex vivo human polymorphonuclear and human mononuclear cells.
Results: Our results show that incubation of EA.hy926 cells with ET-1 led to a 6.5 ± 1.6 fold increase in IL-6 expression by qPCR, an event that was blocked by S. jambos. Also, we observed that ET-1 increased extracellular protein disulfide isomerase (PDI) activity that was likewise dose-dependently blocked by S. jambos (IC50=14µg/mL). Consistent with these observations, ET-1 stimulated ex vivo human polymorphonuclear and mononuclear cell migration that also was dose-dependently blocked by S. jambos. In addition, ET-1 stimulation led to significant increases in ROS production that were sensitive to S. jambos. 
Conclusion: Our results suggest that the S. jambos extract represents a novel cardiovascular protective pharmacological approach to regulate endothelial cell activation, IL-6 expression, and immune-cell responses.
DOI: 10.17632/cjpxvvzmgn
title: Physical simulation tests of the rapid tempering treatment on press hardened boron steel 37MnB4

description: Results of physical simulation tests of the thermal cycle with a heating rate of 250 K/s and hardness tests on the specimen subjected to this thermal cycle.

Hardness tests were conducted along the longitudinal axis of the specimen, starting from the central point where the control thermocouple was welded.

Financed by the European Union - NextGenerationEU (National Sustainable Mobility Center CN00000023, Italian Ministry of University and Research Decree n. 1033 - 17/06/2022, Spoke 11 - Innovative Materials & Lightweighting). The opinions expressed are those of the authors only and should not be considered as representative of the European Union or the European Commission’s official position. Neither the European Union nor the European Commission can be held responsible for them. 

Keywords: Spoke11 - CNMS MOST, Ferrous alloys
DOI: 10.17632/d9p6s6pjbx
title: LDHU3_16.1970

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/f5tf9rcxgc
title: Sandall_Thesis_Videos

description: Christina Sandall Doctoral Thesis Supplemental Videos. Includes representative videos of 1000 ns molecular dynamic simulation analyses of the Nucleotide-Binding Domain and Leucine-Rich Repeat-Containing Gene Family, Pyrin Domain Containing protein 3 (NLRP3) bound with ADP or ATP.
DOI: 10.17632/f82by28vnm
title: Data for: An efficient Lagrangian-based heuristic to solve a multi-objective sustainable supply chain problem

description: Data for: An efficient Lagrangian-based heuristic to solve a multi-objective sustainable supply chain problem
DOI: 10.17632/fstv3n5ysn
title: Data for: Simulation of NOM removal by capillary NF: A numerical method for full-scale plant design

description: Hydraulic performance of the capillary test membrane during the experiments with varying filtration flux and cross-flow velocity.
DOI: 10.17632/n8z3g6dcks
title: LDHU3_04.0350

description: alcohol dehydrogenase-like protein Leishmania donovani (HU3 strain)
DOI: 10.17632/sw4r4m66gk
title: Targeted brain metabolomics in a 7 month-old GBE1-deficient adult polyglucosan body disease mouse model

description: Targeted metabolomic profiles (protein-normalized relative abundances of brain metabolites) were obtained in an adult polyglucosan body disease mouse model and littermate controls. Genotypes and biological replicates are as follows: WT (Gbe1+/+) n=12, Gbe1YS (Gbe1Y329S/Y329S) n=12
DOI: 10.17632/vfvk3f97nh
title: Heme Oxygenase-1 counteracts contrast-induced acute kidney injury in diabetic rats via antioxidant pathway

description: Contrast-induced acute kidney injury (CI-AKI) is the third leading cause of hospital-acquired kidney injury. Diabetes Mellitus is an important risk factor for contrast-induced acute kidney injury and its identification is predictable. Heme oxygenase-1 (HO-1) is a new therapeutic target that exerts antioxidant effect against kidney diseases. This study investigated the effect of HO-1 on metabolic functions, oxidative profile and morphology at CI-AKI in the presence of Diabetes Mellitus. Twenty-eight male Wistar rats weighing 250-300g were randomized into four groups: C (control)- rats submitted to left uninephrectomy on the 1th day; DM- Diabetes was induced by a single dose of intravenous streptozotocin-65mg/kg on the 20th day; DMIC- iodinated contrast- meglumine ioxithalamate (6ml/kg, intraperitoneal, once) rats and DMICH- hemin (HO-1 inducer; 10mg/kg; intraperitoneal; 60 minutes before iodinated contrast) were infused on the 85th day. Diabetic groups showed polyphagia, polydipsia, polyuria, and increase in the blood glucose and in the kidney/animal weight ratio. Iodinated contrast reduced the creatinine clearance and thiols in renal tissue with a prominent increase in urinary NGAL, peroxides, oxide nitric and thiobarbituric acid-reactive substances (TBARS), these parameters were significantly changed by HO-1 inducer. Kidney histology showed tubular cells vacuolization and edema in iodinated contrast animals. The data highlight the HO-1 protective effect against contrast-induced AKI associated with chronic disease, DM.