cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21227/2c1z-8j21
title: American Sign Language dataset for semantic communications

description: The dataset was developed as part of the NANCY project (https://nancy-project.eu/) to support tasks in the computer vision area. It is specifically designed for sign language recognition, focusing on representing joints and finger positions. The dataset comprises images of hands that represent the alphabet in American Sign Language (ASL), with the exception of the letters "J" and "Z," as these involve motion and the dataset is limited to static images. A significant feature of the dataset is the use of color-coding, where each finger is associated with a distinct color. This approach enhances the ability to extract features and distinguish between different fingers, offering significant advantages over traditional grayscale datasets like MNIST. The dataset consists of RGB images, which enhance the recognition process and support more effective learning, achieving high performance even with a relatively modest amount of training data. This format improves the ability to discriminate and extract features compared to grayscale images. Although the use of RGB images introduces additional complexity, such as increased data representation and storage requirements, the advantages in accuracy and feature extraction make it a valuable choice. The dataset is well-suited for applications involving gesture recognition, sign language interpretation, and other tasks requiring detailed analysis of joint and finger positions. The NANCY project has received funding from the Smart Networks and Services Joint Undertaking (SNS JU) under the European Union's Horizon Europe research and innovation programme under Grant Agreement No 101096456.
DOI: 10.15468/dl.q7848u
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((72.57775 21.42939,73.166 21.42158,73.13737 21.78598,72.50226 21.73399,72.57775 21.42939))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Samanea saman (Jacq.) Merr., Acacia mearnsii De Wild., Fusarium acaciae-mearnsii O'Donnell, T.Aoki, Kistler & Geiser, Samanea samanigua Pittier, Samanea samaningua Pittier, Acacia nilotica H.Karst., Acacia nilotica (L.) Willd. ex Delile, Acacia nilotica (L.) Willd., Acacia nilotica subsp. cupressiformis (J.L.Stewart) Ali & Faruqi, Acacia nilotica var. cupressiformis (J.L.Stewart) Vajr. & Kamble, Senna siamea (Lam.) H.S.Irwin & Barneby, Azadirachta indica A.Juss., Ficus religiosa L., Ficus benghalensis L., Casuarina equisetifolia L.)"
 ]
}

 The dataset includes 68 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061039-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11231382
title: Embeddings of SemiSupCon(BBBC036)-bs30
DOI: 10.5281/zenodo.11231383
title: Embeddings of SemiSupCon(BBBC036)-bs30
DOI: 10.15468/dl.2273bj
title: Occurrence Download

description: A dataset containing 7153 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Observation, Material sample, Material citation, Specimen, Fossil, Living Specimen, Occurrence evidence, Human Observation)",
 "OccurrenceStatus is Present",
 "TaxonKey is Homoscleromorpha"
 ]
}

 The dataset includes 7153 records from 159 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061040-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qkccct
title: Occurrence Download

description: A dataset containing 278206 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Simuliidae"
 ]
}

 The dataset includes 278206 records from 547 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061037-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14235789
title: Citizen initiatives submitted to online participation platform Manabalss.lv

description: The anonymized citizen participation data set consists of citizen initiatives submitted to the Latvian civic participation platform "Manabalss.lv" (MyVoice), provided by ParVaiPret Ltd, the owner of the platform. The data were provided within the research project "Innovative and inclusive governance for the promotion of public involvement, trust, and communication".VPP-LETONIKA-2021/3-0004. 

 

The file: 






initiatives since 2011.csv





Includes 944 initiatives submitted since 2011, when the platform was founded.
DOI: 10.5281/zenodo.14235790
title: Citizen initiatives submitted to online participation platform Manabalss.lv

description: The anonymized citizen participation data set consists of citizen initiatives submitted to the Latvian civic participation platform "Manabalss.lv" (MyVoice), provided by ParVaiPret Ltd, the owner of the platform. The data were provided within the research project "Innovative and inclusive governance for the promotion of public involvement, trust, and communication".VPP-LETONIKA-2021/3-0004. 

 

The file: 






initiatives since 2011.csv





Includes 944 initiatives submitted since 2011, when the platform was founded.
DOI: 10.5281/zenodo.14615056
title: Citizen initiatives submitted to online participation platform Manabalss.lv

description: The anonymized citizen participation data set consists of citizen initiatives submitted to the Latvian civic participation platform "Manabalss.lv" (MyVoice), provided by ParVaiPret Ltd, the owner of the platform. The data were provided within the research project "Innovative and inclusive governance for the promotion of public involvement, trust, and communication".VPP-LETONIKA-2021/3-0004. 

 

The file: 






initiatives since 2011.csv





Includes 944 initiatives submitted since 2011, when the platform was founded.
DOI: 10.15468/dl.76jh47
title: Occurrence Download

description: A dataset containing 128 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Ilex triflora Blume",
 "Year 1979-2000"
 ]
}

 The dataset includes 128 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061042-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14615016
title: Research materials for the study "Is safety a state of mind? Exploring the impact of arousal on pedestrians' safety appraisals and attentiveness"

description: Research materials for the study "Is safety a state of mind? Exploring the impact of arousal on pedestrians’ safety appraisals and attentiveness"

Includes:



Raw data & measurements, separately for data collected via E-Prime, physiological data and the light settings measurements.

E-Prime file of the experiment, including the images used in the experiment.

Analysis files


Software used:



Stata 18.0. BE-Basic Edition, Stata Corp, http://www.stata.com

Matlab R2022b (9.13.0.2049777), The MathWorks, Inc.

E-Studio (3.0.3.43) / E-Prime 3.0 (3.0.3.60) Psychology Software Tools http://www.pstnet.com
DOI: 10.5281/zenodo.14615017
title: Research materials for the study "Is safety a state of mind? Exploring the impact of arousal on pedestrians' safety appraisals and attentiveness"

description: Research materials for the study "Is safety a state of mind? Exploring the impact of arousal on pedestrians’ safety appraisals and attentiveness"

Includes:



Raw data & measurements, separately for data collected via E-Prime, physiological data and the light settings measurements.

E-Prime file of the experiment, including the images used in the experiment.

Analysis files


Software used:



Stata 18.0. BE-Basic Edition, Stata Corp, http://www.stata.com

Matlab R2022b (9.13.0.2049777), The MathWorks, Inc.

E-Studio (3.0.3.43) / E-Prime 3.0 (3.0.3.60) Psychology Software Tools http://www.pstnet.com
DOI: 10.5281/zenodo.11204044
title: Baseline embeddings from the BBBC022 dataset used in "Semisupervised contrastive learning for bioactivity prediction using Cell Painting image data"

description: 3 Baseline embeddings aclculated from the BBBC022 dataset. A self-supervised contrastive learning-based model, DINO and CellProfiler were used  to calculate the embeddings.
DOI: 10.5281/zenodo.11204045
title: Baseline embeddings from the BBBC022 dataset used in "Semisupervised contrastive learning for bioactivity prediction using Cell Painting image data"

description: 3 Baseline embeddings aclculated from the BBBC022 dataset. A self-supervised contrastive learning-based model, DINO and CellProfiler were used  to calculate the embeddings.
DOI: 10.15468/dl.fkempp
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mahonia fordii C.K.Schneid.",
 "Year 1000-2025"
 ]
}

 The dataset includes 23 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061043-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28161269
title: Supporting data for homeobox gene annotation of <i>P. dumerilii</i> genome v021

description: Homeobox gene annotation of <i>P. dumerilii </i>genome v021.
DOI: 10.6084/m9.figshare.28161269.v1
title: Supporting data for homeobox gene annotation of <i>P. dumerilii</i> genome v021

description: Homeobox gene annotation of <i>P. dumerilii </i>genome v021.
DOI: 10.6084/m9.figshare.28161269.v2
title: Supporting data for homeobox gene annotation of <i>P. dumerilii</i> genome v021

description: Homeobox gene annotation of <i>P. dumerilii </i>genome v021.
DOI: 10.6084/m9.figshare.28070331
title: Enhanced prediction of beta-secretase inhibitory compounds with mol2vec technique and machine learning algorithms

description: A comprehensive computational strategy that combined QSAR modelling, molecular docking, and ADMET analysis was used to discover potential inhibitors for β-secretase 1 (BACE-1). A dataset of 1,138 compounds with established BACE-1 inhibitory activities was used to build a QSAR model using mol2vec descriptors and support vector regression. The obtained model demonstrated strong predictive performance (training set: <i>r</i><sup>2</sup> = 0.790, RMSE = 0.540, MAE = 0.362; test set: <i>r</i><sup>2</sup> = 0.705, RMSE = 0.641, MAE = 0.495), indicating its reliability in identifying potent BACE-1 inhibitors. By applying this QSAR model together with molecular docking, seven compounds (ZINC8790287, ZINC20464117, ZINC8878274, ZINC96116481, ZINC217682404, ZINC217786309 and ZINC96113994) were identified as promising candidates, exhibiting predicted log IC<sub>50</sub> values ranging from 0.361 to 1.993 and binding energies ranging from −10.8 to −10.7 kcal/mol. Further analysis using ADMET studies and molecular dynamics simulations provided further support for the potential of compound 279 (ZINC96116481) and compound 945 (ZINC96113994) as drug candidates. However, since our study is purely theoretical, further experimental validation through in vitro and in vivo studies is essential to confirm these promising findings.
DOI: 10.6084/m9.figshare.28070331.v1
title: Enhanced prediction of beta-secretase inhibitory compounds with mol2vec technique and machine learning algorithms

description: A comprehensive computational strategy that combined QSAR modelling, molecular docking, and ADMET analysis was used to discover potential inhibitors for β-secretase 1 (BACE-1). A dataset of 1,138 compounds with established BACE-1 inhibitory activities was used to build a QSAR model using mol2vec descriptors and support vector regression. The obtained model demonstrated strong predictive performance (training set: <i>r</i><sup>2</sup> = 0.790, RMSE = 0.540, MAE = 0.362; test set: <i>r</i><sup>2</sup> = 0.705, RMSE = 0.641, MAE = 0.495), indicating its reliability in identifying potent BACE-1 inhibitors. By applying this QSAR model together with molecular docking, seven compounds (ZINC8790287, ZINC20464117, ZINC8878274, ZINC96116481, ZINC217682404, ZINC217786309 and ZINC96113994) were identified as promising candidates, exhibiting predicted log IC<sub>50</sub> values ranging from 0.361 to 1.993 and binding energies ranging from −10.8 to −10.7 kcal/mol. Further analysis using ADMET studies and molecular dynamics simulations provided further support for the potential of compound 279 (ZINC96116481) and compound 945 (ZINC96113994) as drug candidates. However, since our study is purely theoretical, further experimental validation through in vitro and in vivo studies is essential to confirm these promising findings.
DOI: 10.5281/zenodo.10793842
title: Embeddings of SemiSupCon(BBBC022)-bs40
DOI: 10.5281/zenodo.10793843
title: Embeddings of SemiSupCon(BBBC022)-bs40
DOI: 10.15468/dl.cuke2k
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Rhododendron eudoxum Balf.fil. & Forrest"
 ]
}

 The dataset includes 32 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061044-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r587vd
title: Occurrence Download

description: A dataset containing 15653 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Trichiurus lepturus Linnaeus, 1758",
 "Year 2007-2023"
 ]
}

 The dataset includes 15653 records from 83 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061045-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11077987
title: Data and code for "Sympatry, syntopy, and species age: disentangling drivers of signal evolution in a large radiation of passerine birds (Meliphagides)"

description: The following files contain essential data and code required to replicate the analyses outlined in the associated article.

AUTHOR of data files: Helene LeroyCONTACT: lry.helene@gmail.comAUTHORS of the article: H. Leroy, L. Harmáčková, N. R. Friedman, V. RemešDATE CREATED: August 23, 2024

The file named "Melidata.xlsx" consists of four sheets:"data": co-occurrence data and trait (colour and song) distances for each of the 116 species pairs;"legend": explanation of each column name in the "data" sheet"song_recordings": references of song recordings from Xeno-Canto (XC), Macaulay Library at the Cornell Lab of Ornithology (ML), and the Australian National Wildlife Collection (X);"spectral_specimens": museum references of specimens used for spectrophotometric measurements (ANWC: Australian National Wildlife Collection; AMNH: American Museum of Natural History)The four sheets are also available in the repository as independent Microsoft Excel CSV files, respectively as "Melidata.csv", "Melidata_legend.csv", "Melidata_song_recordings.csv" and "Melidata_spectral_specimens.csv".The files were saved in Microsoft Excel Version 2305.

The file named "Melitree.tre" contains the phylogenetic tree of Meliphagides, pruned from the tree published by Marki et al. (2017) Mol. Phylogenet. Evol. 107, 516-529.

The file named "Meliphagoidea_trait-divergence_code.txt" includes code and explanation necessary to replicate the analyses in the R software (R version 4.4.0, R Code Team 2024). Specifically, we present code to fit phylogenetic general linear mixed models with trait distances as responses variables.
DOI: 10.5281/zenodo.11077988
title: Data and code for "Sympatry, syntopy and signal divergence in a continental radiation of passerine birds"

description: The following files contain essential data and code required to replicate the analyses outlined in the associated article.

AUTHOR of data files: Helene LeroyCONTACT: lry.helene@gmail.comAUTHORS of the article: H. Leroy, L. Harmáčková, N. R. Friedman, V. RemešDATE CREATED: April 27, 2024

The file named "Melidata.xlsx" consists of four sheets:"data": co-occurrence data and trait (colour and song) distances for each of the 116 species pairs;"legend": explanation of each column name in the "data" sheet"song_recordings": references of song recordings from Xeno-Canto (XC), Macaulay Library at the Cornell Lab of Ornithology (ML), and the Australian National Wildlife Collection (X);"spectral_specimens": museum references of specimens used for spectrophotometric measurements (ANWC: Australian National Wildlife Collection; AMNH: American Museum of Natural History)The four sheets are also available in the repository as independent Microsoft Excel CSV files, respectively as "Melidata.csv", "Melidata_legend.csv", "Melidata_song_recordings.csv" and "Melidata_spectral_specimens.csv".The files were saved in Microsoft Excel Version 2305.

The file named "Melitree.tre" contains the phylogenetic tree of Meliphagoidea, pruned from the tree published by Marki et al. (2017) Mol. Phylogenet. Evol. 107, 516-529.

The file named "Meliphagoidea_trait-divergence_code.txt" includes code and explanation necessary to replicate the analyses in the R software (R version 4.3.2, R Code Team 2023). Specifically, we present code to fit three types of phylogenetic general linear mixed models with trait distances as responses variables.
DOI: 10.5281/zenodo.13366408
title: Data and code for "Sympatry, syntopy, and species age: disentangling drivers of signal evolution in a large radiation of passerine birds (Meliphagides)"

description: The following files contain essential data and code required to replicate the analyses outlined in the associated article.

AUTHOR of data files: Helene LeroyCONTACT: lry.helene@gmail.comAUTHORS of the article: H. Leroy, L. Harmáčková, N. R. Friedman, V. RemešDATE CREATED: August 23, 2024

The file named "Melidata.xlsx" consists of four sheets:"data": co-occurrence data and trait (colour and song) distances for each of the 116 species pairs;"legend": explanation of each column name in the "data" sheet"song_recordings": references of song recordings from Xeno-Canto (XC), Macaulay Library at the Cornell Lab of Ornithology (ML), and the Australian National Wildlife Collection (X);"spectral_specimens": museum references of specimens used for spectrophotometric measurements (ANWC: Australian National Wildlife Collection; AMNH: American Museum of Natural History)The four sheets are also available in the repository as independent Microsoft Excel CSV files, respectively as "Melidata.csv", "Melidata_legend.csv", "Melidata_song_recordings.csv" and "Melidata_spectral_specimens.csv".The files were saved in Microsoft Excel Version 2305.

The file named "Melitree.tre" contains the phylogenetic tree of Meliphagides, pruned from the tree published by Marki et al. (2017) Mol. Phylogenet. Evol. 107, 516-529.

The file named "Meliphagoidea_trait-divergence_code.txt" includes code and explanation necessary to replicate the analyses in the R software (R version 4.4.0, R Code Team 2024). Specifically, we present code to fit phylogenetic general linear mixed models with trait distances as responses variables.
DOI: 10.5281/zenodo.12697778
title: Southern Ocean Monthly Climatology
title: Dataset of Yamazaki et al. "Monthly climatology of the Southern Ocean under sea ice"

description: This version is obsolete. The latest version: https://zenodo.org/records/13148501
DOI: 10.60656/4355e6323c3b4c1f
title: Custom collection of MWR multiple pointing data from Leipzig LIM between 1 Jan 2024 and 1 Jan 2025
DOI: 10.15468/dl.cayzug
title: Occurrence Download

description: A dataset containing 8167612 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "OccurrenceStatus is Present",
 "TaxonKey is Erithacus rubecula (Linnaeus, 1758)",
 "Year 2000-2025"
 ]
}

 The dataset includes 8167612 records from 5940 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061020-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sy8c4p
title: Occurrence Download

description: A dataset containing 5757 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amazona vinacea"
 ]
}

 The dataset includes 5757 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055287-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-52080
title: Redemption tidings, vol. 33, nos. 1-52, 4 Jan. - 25 Dec. 1957

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.
DOI: 10.15468/dl.6pjrmv
title: Occurrence Download

description: A dataset containing 175 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (United States of America)",
 "BasisOfRecord is one of (Specimen)",
 "Year is greater than or equal to 1900",
 "TaxonKey is Bactrocera dorsalis (Hendel, 1912)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 175 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0435020-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c49fa3
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Aschersoniodoxa mandoniana (Wedd.) Gilg & Muschl."
 ]
}

 The dataset includes 47 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059359-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gwg5zr
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trachypithecus shortridgei (Wroughton, 1915)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0352639-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-52144
title: Redemption tidings, vol. 33, nos. 1-52, 4 Jan. - 25 Dec. 1957

description: [description english/roman)] Issued weekly. "A full gospel magazine" -- subtitle.