cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.8kf6cn
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Davallia teyermannii Baker"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245415-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-3149/6
title: equilibration.mdp

description: :unav
DOI: 10.15468/dl.yxxhuf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Polytoxus annulipes Miyamoto & Lee, 1966",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224137-220831081235567/datasets/export for details.
DOI: 10.18419/darus-3149/7
title: ions.itp

description: :unav
DOI: 10.15468/dl.cfjxcr
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Acalolepta hachijoensis (Gressitt, 1956)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224132-220831081235567/datasets/export for details.
DOI: 10.18419/darus-3149/8
title: generate_runs.py

description: :unav
DOI: 10.15468/dl.ya2m4x
title: Occurrence Download

description: A dataset listing the 3 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-99.40476 20.07287,-99.37545 20.07287,-99.37545 20.09588,-99.40476 20.09588,-99.40476 20.07287))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset's 3 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001887-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kc92nq
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (186445098, Cryptocarya hainanensis Merr., 1922, Cryptocarya hainanensis, Cryptocarya hainanensis, Cryptocarya hainanensis Merr., Cryptocarya hainanensis Merr., Cryptocarya hainanensis Merr., Cryptocarya hainanensis Merr., Cryptocarya hainanensis Merr., Cryptocarya hainanensis Merr., Cryptocarya rolletii H. Wang & H. Zhu, Cryptocarya rolletii H.Wang & H.Zhu, Cryptocarya rolletii H.Wang & H.Zhu, Cryptocarya rolletii H.Wang & H.Zhu)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 47 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0245416-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-3149/9
title: entire_index.ndx

description: :unav
DOI: 10.18419/darus-3149/10
title: condor_basis.sub

description: :unav
DOI: 10.15468/dl.5bc575
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hylurgus ligniperda (J.C.Fabricius, 1787)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224133-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zdkr48
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Allium funckiifolium Hand.-Mazz.",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262740-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-3149/11
title: hydroxide.itp

description: :unav
DOI: 10.15468/dl.pgrg96
title: Occurrence Download

description: A dataset containing 127 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Ecuador",
 "TaxonKey is Huperzia cumingii (Nessel) Holub"
 ]
}

 The dataset includes 127 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0248281-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-3149/12
title: minimization_md.mdp

description: :unav
DOI: 10.15468/dl.6jcbt4
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eobroscus lutshniki (Roubal, 1928)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 32 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224144-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18419/darus-3149/13
title: kapton.itp

description: :unav
DOI: 10.15468/dl.2hfeg7
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Allium forrestii Diels",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 143 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0262739-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.x94jyy
title: Occurrence Download

description: A dataset containing 8706 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-78.25477 2.91724,-78.12703 2.91724,-78.12703 3.02389,-78.25477 3.02389,-78.25477 2.91724))",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 8706 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0248283-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f96f78
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Argopistes tsekooni",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0224134-220831081235567/datasets/export for details.
DOI: 10.18419/darus-3149/14
title: min_md.gro

description: :unav
DOI: 10.18419/darus-3149/15
title: minimization.mdp

description: :unav
DOI: 10.18419/darus-3149/16
title: run_script.sh

description: :unav
DOI: 10.15468/dl.3m6wue
title: Occurrence Download

description: A dataset containing 7111563 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 7111563 records from 4625 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0248984-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9d4n5x
title: Occurrence Download

description: A dataset containing 845 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cladonia fimbriata",
 "Country is one of (Norway)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1986",
 "Year is less than or equal to 2025",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Machine Observation"
 ]
 }
 }
 ]
}

 The dataset includes 845 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023005-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hrq5wk
title: Occurrence Download

description: A dataset containing 573 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cladonia subulata",
 "Country is one of (Norway)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1986",
 "Year is less than or equal to 2025",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Machine Observation"
 ]
 }
 }
 ]
}

 The dataset includes 573 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023007-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14858748
title: PhishStorm - phishing / legitimate URL dataset
DOI: 10.15468/dl.xtty9x
title: Occurrence Download

description: A dataset containing 3039 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cladonia stellaris",
 "Country is one of (Norway)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1986",
 "Year is less than or equal to 2025",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Machine Observation"
 ]
 }
 }
 ]
}

 The dataset includes 3039 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023009-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18665399
title: Face-shaped Human-Face Jade Form 05(EANJ_FACE_05): Digital Visual Documentation (Low-Resolution Public Preview)

description: I. Scope and Purpose

This dataset documents a multi-view visual record of an East Asian prehistoric jade object featuring a human-face motif (EANJ_FACE_05). The object represents a single specimen within a systematic digital archiving project comprising multiple human-face–shaped artifacts and forms part of a continuously expanding data collection.

The purpose of this record is to provide independently verifiable baseline visual data through standardized image acquisition and organization, serving as an objective reference foundation for subsequent academic work.

Provided that researchers operate within clearly defined research questions and methodological frameworks, this dataset may be used to support cross-comparative morphological studies, teaching examples, and non-invasive re-analysis based on image-derived evidence.

Access Note:This record constitutes a low-resolution public preview (Public Preview). The high-resolution original image dataset (Record B), including RAW/TIFF files, has been published separately under restricted access. Qualified researchers may apply for access via the following DOI:https://doi.org/10.5281/zenodo.18652811

 

II. Academic Neutrality and Non-Interpretive Disclaimer

This dataset adheres to a principle of non-interpretive description, intended to ensure scientific neutrality and methodological transparency throughout the documentation process.

All textual descriptions and image annotations are strictly limited to directly observable phenomena and do not constitute, imply, or suggest any archaeological attribution, cultural identification, chronological assessment, or historical contextualization.

This record does not address, evaluate, or speculate on the object’s provenance, function, scholarly significance, or commercial value, nor does it represent any form of interpretive or conclusory statement.
DOI: 10.5281/zenodo.18665400
title: Face-shaped Human-Face Jade Form 05(EANJ_FACE_05): Digital Visual Documentation (Low-Resolution Public Preview)

description: I. Scope and Purpose

This dataset documents a multi-view visual record of an East Asian prehistoric jade object featuring a human-face motif (EANJ_FACE_05). The object represents a single specimen within a systematic digital archiving project comprising multiple human-face–shaped artifacts and forms part of a continuously expanding data collection.

The purpose of this record is to provide independently verifiable baseline visual data through standardized image acquisition and organization, serving as an objective reference foundation for subsequent academic work.

Provided that researchers operate within clearly defined research questions and methodological frameworks, this dataset may be used to support cross-comparative morphological studies, teaching examples, and non-invasive re-analysis based on image-derived evidence.

Access Note:This record constitutes a low-resolution public preview (Public Preview). The high-resolution original image dataset (Record B), including RAW/TIFF files, has been published separately under restricted access. Qualified researchers may apply for access via the following DOI:https://doi.org/10.5281/zenodo.18652811

 

II. Academic Neutrality and Non-Interpretive Disclaimer

This dataset adheres to a principle of non-interpretive description, intended to ensure scientific neutrality and methodological transparency throughout the documentation process.

All textual descriptions and image annotations are strictly limited to directly observable phenomena and do not constitute, imply, or suggest any archaeological attribution, cultural identification, chronological assessment, or historical contextualization.

This record does not address, evaluate, or speculate on the object’s provenance, function, scholarly significance, or commercial value, nor does it represent any form of interpretive or conclusory statement.
DOI: 10.15468/dl.gcne7v
title: Occurrence Download

description: A dataset containing 896 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cladonia cenotea",
 "Country is one of (Norway)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1986",
 "Year is less than or equal to 2025",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Machine Observation"
 ]
 }
 }
 ]
}

 The dataset includes 896 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023010-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18471439
title: Biophysical Modeling of Enzyme-Kinetic Calcium-Dependent Stochastic Synaptic Plasticity: Integrating STDP, Metabolic Constraints, Bayesian Inference, Sensitivity Analysis, and Validation with Allen Institute Data

description: Contemporary synaptic plasticity models often lack a unified integration of biophysical enzyme kinetics, metabolic energy constraints, and intrinsic stochastic variability, limiting their fidelity in replicating empirical neural dynamics. This study addresses these limitations through a comprehensive biophysical framework extending the Hodgkin-Huxley model to incorporate calcium-dependent stochastic plasticity mediated by competitive enzyme kinetics (CaMKII for long-term potentiation, LTP; calcineurin for long-term depression, LTD), modulated by spike-timing-dependent plasticity (STDP) traces. Key advancements include ATP-regulated calcium extrusion for metabolic realism, Ornstein-Uhlenbeck noise for stochasticity, BCM-like sliding thresholds for homeostasis, and AMPAR trafficking for synaptic efficacy. The model is rigorously evaluated using Bayesian inference for parameter estimation, global sensitivity analysis via Sobol indices over an expanded parameter space (encompassing STDP time constants), uncertainty quantification through bootstrapping and Monte Carlo methods, and direct validation against the Allen Institute Synaptic Physiology Dataset (comprising over 1800 synapses, achieving a mean RMSE of 0.03 mV and KL divergence ∼ 0.05 for PSP distributions). Simulations reproduce observed synaptic strengths (medians ∼ 0.1–0.5 mV), kinetics, and short-term facilitation/depression. Parameter sweeps (n=100 per variable) confirm robustness, with 85% of iterations maintaining weight variance <0.1. Falsifiability criteria are explicitly defined: the model is invalidated by deviations >20% from empirical medians (KL >1.0) or discordant sensitivity rankings (e.g., S_i(g_K) < S_i(K_p)). This approach advances biophysical neuroscience and informs neuromorphic hardware design, with implications for adaptive neuromodulation in disorders such as epilepsy and depression.
DOI: 10.5281/zenodo.18665420
title: Biophysical Modeling of Enzyme-Kinetic Calcium-Dependent Stochastic Synaptic Plasticity: Integrating STDP, Metabolic Constraints, Bayesian Inference, Sensitivity Analysis, and Validation with Allen Institute Data

description: Contemporary synaptic plasticity models often lack a unified integration of biophysical enzyme kinetics, metabolic energy constraints, and intrinsic stochastic variability, limiting their fidelity in replicating empirical neural dynamics. This study addresses these limitations through a comprehensive biophysical framework extending the Hodgkin-Huxley model to incorporate calcium-dependent stochastic plasticity mediated by competitive enzyme kinetics (CaMKII for long-term potentiation, LTP; calcineurin for long-term depression, LTD), modulated by spike-timing-dependent plasticity (STDP) traces. Key advancements include ATP-regulated calcium extrusion for metabolic realism, Ornstein-Uhlenbeck noise for stochasticity, BCM-like sliding thresholds for homeostasis, and AMPAR trafficking for synaptic efficacy. The model is rigorously evaluated using Bayesian inference for parameter estimation, global sensitivity analysis via Sobol indices over an expanded parameter space (encompassing STDP time constants), uncertainty quantification through bootstrapping and Monte Carlo methods, and direct validation against the Allen Institute Synaptic Physiology Dataset (comprising over 1800 synapses, achieving a mean RMSE of 0.03 mV and KL divergence ∼ 0.05 for PSP distributions). Simulations reproduce observed synaptic strengths (medians ∼ 0.1–0.5 mV), kinetics, and short-term facilitation/depression. Parameter sweeps (n=100 per variable) confirm robustness, with 85% of iterations maintaining weight variance <0.1. Falsifiability criteria are explicitly defined: the model is invalidated by deviations >20% from empirical medians (KL >1.0) or discordant sensitivity rankings (e.g., S_i(g_K) < S_i(K_p)). This approach advances biophysical neuroscience and informs neuromorphic hardware design, with implications for adaptive neuromodulation in disorders such as epilepsy and depression.
DOI: 10.15468/dl.we2ghu
title: Occurrence Download

description: A dataset containing 295321 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Catharus minimus)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "BasisOfRecord is Human Observation",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 },
 "Geometry POLYGON ((-180 -89.99893, 180 -89.99893, 180 83.59961, -180 83.59961, -180 -89.99893))"
 ]
}

 The dataset includes 295321 records from 92 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022991-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bz9v2b
title: Occurrence Download

description: A dataset containing 94 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cladonia borealis",
 "Country is one of (Norway)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1986",
 "Year is less than or equal to 2025",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Machine Observation"
 ]
 }
 }
 ]
}

 The dataset includes 94 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023011-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tu8jsk
title: Occurrence Download

description: A dataset containing 786 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cladonia pleurota",
 "Country is one of (Norway)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1986",
 "Year is less than or equal to 2025",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Machine Observation"
 ]
 }
 }
 ]
}

 The dataset includes 786 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023013-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bnbhum
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Aeschna"
 ]
}

 The dataset includes 29 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023014-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.29dnbw
title: Occurrence Download

description: A dataset containing 1900 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cladonia bellidiflora",
 "Country is one of (Norway)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "CoordinateUncertaintyInMeters is less than or equal to 1000",
 "Year is greater than or equal to 1986",
 "Year is less than or equal to 2025",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 },
 {
 "not" : {
 "BasisOfRecord" : [
 "is Machine Observation"
 ]
 }
 }
 ]
}

 The dataset includes 1900 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023015-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.