cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21233/gpgn-h478
title: LRRB114 pollen surface sample dataset

description: Raw data for the LRRB114 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/szav-zk98
title: CHSV7 pollen surface sample dataset

description: Raw data for the CHSV7 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/x9vm-av03
title: ALASK  4 pollen surface sample dataset

description: Raw data for the ALASK  4 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/1gtc-r464
title: Last Mountain Lake ostracode surface sample dataset

description: Raw data for the Last Mountain Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/pw9t-9a53
title: LDDsite2341 ostracode surface sample dataset

description: Raw data for the LDDsite2341 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/6eg6-mt07
title: Peary Lead 210 dataset

description: Raw data for the Peary Lead 210 dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/mrc2-tz43
title: Low Dalby (Seive Dale Fen) ostracode surface sample dataset

description: Raw data for the Low Dalby (Seive Dale Fen) ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/htrn-fn03
title: Lake Clear ostracode surface sample dataset

description: Raw data for the Lake Clear ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/ypt1-8647
title: North Sulphur River macroinvertebrate dataset

description: Raw data for the North Sulphur River macroinvertebrate dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.w3xptt
title: Occurrence Download

description: A dataset containing 1151 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "Month is one of (June, July, August)",
 "OccurrenceStatus is Present",
 "TaxonKey is Phyllodoce glanduliflora (Hook.) Coville"
 ]
}

 The dataset includes 1151 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024183-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/7mdyx8xt43.1
title: Low-temperature thermochronological data from the Eastern Pyrenees: apatite and zircon (U-Th)/He

description: Apatite and zircon (U-Th)/He data from the Eastern Pyrenees, covering the main tectonic units of the Axial Zone east from the Tec fault (Aspres, Canigó, Roc de Frausa, Albera). This data was collected in the framework of the PhD thesis by Sabí Peris Cabré, at Universitat Autònoma de Barcelona. The analyses were conducted in the laboratory facilities at University of Texas at Austin, in the Geochron lab.
DOI: 10.5281/zenodo.15439499
title: The data and code for Reconciling links between diversity and population stability across global plant communities by Pan et al.

description: This is the data and code for the paper 'Reconciling links between diversity and population stability across global plant communities' by Pan et al.
DOI: 10.5281/zenodo.15439500
title: The data and code for Reconciling links between diversity and population stability across global plant communities by Pan et al.

description: This is the data and code for the paper 'Reconciling links between diversity and population stability across global plant communities' by Pan et al.
DOI: 10.6084/m9.figshare.28430789
title: Data files and variable descriptions (in readMe)

description: We present a newly developed design for a self-contained benthic chamber for conducting in situ ecosystem experiments in streams, with a focus on biogeochemical processes such as ecosystem metabolism and nutrient cycling. Our design is complementary to smaller, portable chamber designs, and is meant to answer questions at larger scales. These new chambers allow for a high level of experimental control in the field and can be used to generate spatially explicit data regarding ecosystem processes and to test mechanistic hypotheses. They are built to be deployed within the stream over periods of weeks to months and to withstand natural hydraulic forces of the benthic zone. First, we describe the materials and steps that are needed to construct these chambers in detail. Then, we report the methods and results of a multi-part, diagnostic field study meant to demonstrate the performance and utility of the design. We quantified solute dynamics using a conservative tracer injection, then we estimated ecosystem metabolism across the study site and performed nutrient additions. The field study revealed that both flow velocity and water depth impose limitations on these chambers, but with appropriate methodological forethought these limitations can be minimized. The capacity of our design to accommodate complex, three-dimensional habitats and macrofauna, along with the capability to generate spatially explicit data, are the main advances we present. These advances provide a novel method whereby motivated users can connect mechanistic hypothesis testing with natural ecological processes through ecosystem-level field experiments.
DOI: 10.17632/k3t9h984s5.1
title: FDI - Fractal Dimension Index

description: FDI is a MATLAB tool for computing the Fractal Dimension Index of reconstructed sources (dipoles) obtained from EEG data. The fractal dimension (FD) is a valuable tool for analysing the complexity of neural structures and functions in the human brain. To assess the spatiotemporal complexity of brain activations derived from electroencephalogram (EEG) signals, the fractal dimension index (FDI) was developed. This measure integrates two distinct complexity metrics: 1) integration FD, which calculates the FD of the spatiotemporal coordinates of all significantly active EEG sources (4DFD); and 2) differentiation FD, determined by the complexity of the temporal evolution of the spatial distribution of cortical activations (3DFD), estimated via the Higuchi FD [HFD(3DFD)]. The final FDI value is the product of these two measurements: 4DFD × HFD(3DFD). We introduce an open-source MATLAB software named FDI for measuring FDI values in EEG datasets. By using CUDA for leveraging the GPU massive parallelism to optimize performance, our software facilitates efficient processing of large-scale EEG data while ensuring compatibility with pre-processed data from widely used tools such as Brainstorm and EEGLab. The FDI toolbox allows neuroscientists to readily apply FDI to investigate cortical activity complexity within their own studies.
DOI: 10.17632/6gk8s3d8kw.1
title: Fast Box-counting

description: The box-counting (BC) algorithm is one of the most popular methods for calculating the fractal dimension (FD) of binary data. FD analysis has many important applications in the biomedical field, such as cancer detection from 2D computed axial tomography images, Alzheimer’s disease diagnosis from magnetic resonance 3D volumetric data, and consciousness states characterization based on 4D data extracted from electroencephalography (EEG) signals, among many others. Currently, these kinds of applications use data whose size and amount can be very large, with high computation times needed to calculate the BC of the whole datasets. 
Fast Box-counting is a very efficient parallel implementation of the BC algorithm for its execution on Graphics Processing Units (GPU).
DOI: 10.15468/dl.pzhpnx
title: Occurrence Download

description: A dataset containing 72801 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Gypsophila L."
 ]
}

 The dataset includes 72801 records from 761 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001824-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/v3p-c14-4ed
title: †Productus Sowerby, 1814

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ysk-v8d-y7f
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1wn-de1-k0n
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rhe-1n7-c17
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/zcq-89y-dbp
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jde-b6m-ksv
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v6x-apw-ess
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/txe-1f6-asf
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/v6m-9hn-wyq
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/280-cr1-rww
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kqm-dgm-rbp
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cd6-jc1-p4l
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ywa-9kk-a8h
title: †Exogyra Say, 1820

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3w5-dp6-cyf
title: Cetorhinus maximus (Gunnerus, 1765)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ytl-x8y-eky
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0tz-8bv-621
title: Circe Schumacher, 1817

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r1m-69j-jy8
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/tsd-8jf-x49
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/m53-tex-mxz
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/skt-8kh-28k
title: Equus (Equus) caballus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ngv-pks-hs0
title: Bivalvia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qkg-d3d-h2b
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fkb-m1l-3cq
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ggs-x7h-k6g
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/j49-kag-7jg
title: Arcidae Lamarck, 1809

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/kqd-0g2-js1
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/t1x-4cq-g6b
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/3r6-6lt-gcw
title: †Pterotrigonia van Hoepen, 1929

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/q49-m8v-g6z
title: Balclutha Kirkaldy, 1900

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/pd1-tra-ss3
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r6z-lkn-m6m
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jxz-cwh-jmp
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/923-9t3-lhj
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/r9z-mzv-6kh
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1f8-qp7-36p
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/cm8-ldw-86y
title: Mammalia Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/djk-ee0-9yr
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/8nb-ls6-dt2
title: Animalia

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hbw-35x-lwz
title: Gadiculus

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0ps-vbf-e7k
title: Turbinolia Lamarck, 1816

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/l8g-0a7-s2z
title: †Montastraea irradians (Milne Edwards & Haime, 1848)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/17n-xga-5fy
title: †Neocrassina P. Fischer, 1887

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/wxp-ckr-qhe
title: Cnidaria

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.ah4ear
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is DEU.3_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Diploschistes muscorum (Scop.) R.Sant."
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013196-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21945/15674553-55d5-41ed-ba52-fd8588e73099
title: Monitor stikstofdepositie in Natura 2000-gebieden

description: Verzameling van verwijzingen naar data die gebruikt is voor het Monitoringsprogramma "Monitor stikstofdepositie in Natura 2000-gebieden".
DOI: 10.7488/210e1946-2590-49ec-8a1d-a31667d1b3bb
title: Temporal analysis of RNA turnover in Interferon Gamma treated bone marrow-derived macrophages

description: Bone Marrow derived macrophages (BMDM) were grown using L929 conditioned medium. On day 7, BMDM were mock-treated (16x 15cm dishes) or treated (16x 15cm dishes) with 10U/ml interferon gamma at time zero. 4-thiouridine (4sU) was then used to label newly transcribed RNA every 30 minutes for 8h (0 to 30, 30 to 60 etc. to give 16 discrete successive labellings) in mock and interferon gamma-treated samples. 16x Mock and 16x treated total samples were then isolated (32 in total) and newly transcribed RNA isolated from each total RNA sample using a protocol described in Dolken et al (PMID: 18658122). For analysis, 32 (16x mock and 16x treated) newly-transcribed RNA samples (every 30 minutes for complete 8h time course) and 16 (8x mock and 8x treated) total RNA samples (every hour for 8h time course) were hybridized to Affymetrix GeneST v1.0 arrays.
description: Interferon gamma treatment of macrophages results in hundreds if not thousands of alterations in gene expression and an antiviral state being established in these cells. Little is known about relationship between transcript synthesis, abundance and decay in macrophages during the first hours after interferon gamma treatment and how these factors influence the antiviral cellular phenotype.
Microarrays were used to analyse alterations in transcript synthesis and abundance in BMDM treated with Interferon Gamma for 8h.
description: Robertson KA, Ghazal P (Division of Infection and Pathway Medicine, University of Edinburgh)
DOI: 10.5281/zenodo.7304697
title: Board Leadership Database (U.S. Public Firms) + ML Script for Scaling Human Coded Data

description: Files include: (1) an open sourced database of CEO duality and board chair orientations developed by scaling human coded data using supervised machine learning techniques (in both .dta and .csv formats), as well as (2) the accompanying training and scoring scripts to scale human coded data. Users may apply the scoring script to score the same variables from company proxy statements, or may adapt the training/scoring scripts and retrain models to scale human coded data of other constructs or measures. We note that early steps in the process to develop our database and script required web-scraping of company filings from SEC Edgar and text extraction from collected filings. We relied on other publicly available scripts to develop our own fetcher and extraction scripts. Users seeking to duplicate those parts of the process may benefit from the following resources from Kai Chen and pipy.org: For resources from Kai Chen: see https://www.kaichen.work/?p=681 and https://www.kaichen.work/?p=946 For resources from pipy.org, see sec-edgar-downloader and sec-api
DOI: 10.15468/dl.b4vd6c
title: Occurrence Download

description: A dataset containing 85 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Romania",
 "TaxonKey is Phytolacca acinosa Roxb."
 ]
}

 The dataset includes 85 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005696-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s75a6c
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ipomoea quamoclit",
 "Country is Cuba",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084141-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qn78mf
title: Occurrence Download

description: A dataset containing 378 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Halictidae",
 "Geometry POLYGON ((-44.54777683559197 -23.260618951062984, -41.73913667874437 -23.260618951062984, -41.73913667874437 -21.950522887532973, -44.54777683559197 -21.950522887532973, -44.54777683559197 -23.260618951062984))"
 ]
}

 The dataset includes 378 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012300-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r5c48c
title: Occurrence Download

description: A dataset containing 25062 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "Geometry POLYGON((-76.75185409158824 3.0611867514180915,-76.75185409158824 2.851117720988384,-76.21127017807095 2.851117720988384,-76.21127017807095 3.0611867514180915,-76.75185409158824 3.0611867514180915))",
 "HasCoordinate is true"
 ]
 }
 ]
}

 The dataset includes 25062 records from 105 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007843-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tk4tae
title: Occurrence Download

description: A dataset containing 170 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mimosa pigra L.",
 "Country is Honduras"
 ]
}

 The dataset includes 170 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007847-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14490035
title: Berita UNDIP