cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1128845.09fu
title: SH1128845.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1128846.09fu
title: SH1128846.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1128847.09fu
title: SH1128847.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1128848.09fu
title: SH1128848.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1128849.09fu
title: SH1128849.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1128850.09fu
title: SH1128850.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1128851.09fu
title: SH1128851.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1128852.09fu
title: SH1128852.09FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3886/e124561v2
title: From Statehood to School Desegregation: Racial Disparites in the Public Education of Mississippi, 1817 - 1969

description: In Williams et al. v. Bryant et al. (2017), four Black mothers claim their elementary-aged children are educated in schools with predominantly Black enrollments that have conditions incomparable to schools in neighboring school districts with predominantly White enrollments and higher socioeconomic statuses. The lawsuit claims this racial inequality in education is a violation of the post-Civil War Readmission Act (1868) requirement to provide a “uniform system of free public schools” (Williams et al. v. Bryant et al., 2017, p. 3) and to not modify state laws to disadvantage a group of citizens. <br><br>As the case moves through the courts one generation after Black parents in Alexander v. Holmes County Board of Education (1969) fought for school desegregation to produce racial equality in education, this archival study investigates to what extent Mississippi administered racial disparities in public education between Black students and White students from its statehood in 1817 through desegregation. This period of history was selected with implications for explaining systemic racial disparities as school resegregated shortly after Alexander v. Holmes enforced desegregation, school desegregation “failed to narrow educational gaps or alter the educational status of most Blacks” (Baker, 2001, p. 321), and parental education can influence a student’s education outcomes.<br><br>The data show Mississippi amended its laws and reformed its educational practices to (a) deny Black slaves access to education; (b) delay the consolidation of Black schools; (c) require Black Mississippians to pay a large percentage of the cost for the construction of their schools; (d) distribute school funding unequally; (e) permit elementary school attrition; (f) repeal its compulsory attendance law. These barriers were enacted to resist school desegregation and to prevent high school education in an overall effort to maintain a pre-Civil War racial hierarchy.
DOI: 10.3886/e124561v3
title: From Statehood to School Desegregation: Racial Disparities in the Public Education of Mississippi, 1817 - 1969

description: On the 50th year anniversary of Alexander v. Holmes Board of Education (1969) nationally enforcing school desegregation in fall 1970, Mississippi is being sued for racial disparities in public education between Black students and White students in Williams et al. v. Bryant et al. (2017). Using quantitative and qualitative primary sources, I investigate the extent to which Mississippi administered racial disparities in public education between Black students and White students since its statehood in 1817 through school desegregation. To the extent that research suggests school desegregation “failed to narrow educational gaps or alter the educational status of most Blacks” (Baker, 2001, p. 321) and parental education can influence a student’s education outcomes, Black parents in Williams et al. v. Bryant et al. fighting for racial equality in education for their children in segregated schools one generation after Black parents in Alexander v. Holmes County Board of Education (1969) fought for school desegregation to produce racial equality in education suggests the history of racial disparities in the public education of Mississippi is contemporarily salient.<br><br>The data in the study show Mississippi amended its laws and reformed its educational practices to (a) deny Black slaves access to education; (b) delay the consolidation of Black schools; (c) require Black Mississippians to pay a large percentage of the cost for the construction of their schools; (d) distribute school funding unequally; (e) permit elementary school attrition; (f) repeal its compulsory attendance law. These barriers were enacted to resist school desegregation and to prevent high school education in an overall effort to maintain a pre-Civil War racial hierarchy.
DOI: 10.3886/e112578v1-46541
title: Replication data for: Innovation and Foreign Ownership

description: This paper uses a rich panel dataset of Spanish manufacturing firms (1990-2006) and a propensity score reweighting estimator to show that multinational firms acquire the most productive domestic firms, which, on acquisition, conduct more product and process innovation (simultaneously adopting new machines and organizational practices) and adopt foreign technologies, leading to higher productivity. We propose a model of endogenous selection and innovation in heterogeneous firms that explains both the observed selection patterns and the innovation decisions. Further, we show in the data that innovation upon acquisition is associated with the increased market scale provided by the parent firm.
DOI: 10.3886/e124561v4
title: From Statehood to School Desegregation: Racial Disparities in the Public Education of Mississippi, 1817 - 1969

description: On the 50th year anniversary of Alexander v. Holmes Board of Education (1969) nationally enforcing school desegregation in fall 1970, Mississippi is being sued for racial disparities in public education between Black students and White students in Williams et al. v. Bryant et al. (2017). Williams et al. v. Bryant et al. claims the current racial inequality in education is a violation of the post-Civil War Readmission Act (1868) requirement to provide a “uniform system of free public schools” (Williams et al. v. Bryant et al., 2017, p. 3) and to not modify state laws to disadvantage a group of citizens. Using quantitative and qualitative primary sources, I investigate the extent to which Mississippi administered racial disparities in public education between Black students and White students since its statehood in 1817 through school desegregation. To the extent that research suggests school desegregation “failed to narrow educational gaps or alter the educational status of most Blacks” (Baker, 2001, p. 321) and parental education can influence a student’s education outcomes, Black parents in Williams et al. v. Bryant et al. fighting for racial equality in education for their children in segregated schools one generation after Black parents in Alexander v. Holmes fought for school desegregation to produce racial equality in education suggests the history of racial disparities in the public education of Mississippi is contemporarily salient.<br><br>The data in the study show Mississippi amended its laws and reformed its educational practices to (a) deny Black slaves access to education; (b) delay the consolidation of Black schools; (c) require Black Mississippians to pay a large percentage of the cost for the construction of their schools; (d) distribute school funding unequally; (e) permit elementary school attrition; (f) repeal its compulsory attendance law. These barriers were enacted to resist school desegregation and to prevent high school education in an overall effort to maintain a pre-Civil War racial hierarchy.
DOI: 10.6084/m9.figshare.12609068
title: Supplementary Data for Hua et al. (2020)

description: This dataset contains supplementary data for the analyses presented in:<br><br>Zhengshuang Hua, Matthew Ouellette, Andrea M. Makkay, R. Thane Papke, and Olga Zhaxybayeva. <i>Nutrient supplementation experiments on saltern microbial communities support utilization of DNA as a source of phosphorus</i> (under review).<br><br><b>Dataset contents:<br></b><br><b>Quality_Control_script.zip:</b> In-house Perl script used for quality control processing of raw Illumina reads. See README.md file inside the archive for details.<br><br><b>merged_pairs.zip:</b> Merged pairs from the rpoB and 16S rRNA data after the quality control step, removal of primers, and additional removal of low quality sequences. The sequences are in FASTA format.<br><br><b>rpoB_database.zip:</b> Curated database of 627 rpoB gene sequences used for taxonomic assignment of a representative sequence of an rpoB-based OTU. <i>Halobacteria.rpoB.627.fa</i> file contains nucleotide sequences in FASTA format. <i>Halobacteria.rpoB.627.taxonomy</i> file contains the taxonomic information for each sequence.<br><br><b>OTU_tables_and_rep_seqs.zip</b>: OTU tables for rpoB- and 16S rRNA-based OTUs (<i>otu_table.rpoB.txt</i> and <i>otu_table.16S.txt</i> files). Each row represents an OTU. Each column represent a sample. Values in the table show how many assembled contigs are in an OTU. Nucleotide sequences of chosen to represent each OTU are provided in rep_set_rpoB.fna and rep_set_16S.fna files, in FASTA format.<br><br>
DOI: 10.6084/m9.figshare.12609068.v2
title: Supplementary Data for Hua et al. (2020)

description: This dataset contains supplementary data for the analyses presented in:<br><br>Zhengshuang Hua, Matthew Ouellette, Andrea M. Makkay, R. Thane Papke, and Olga Zhaxybayeva. <i>Nutrient supplementation experiments on saltern microbial communities support utilization of DNA as a source of phosphorus</i> (under review).<br><br><b>Dataset contents:<br></b><br><b>Quality_Control_script.zip:</b> In-house Perl script used for quality control processing of raw Illumina reads. See README.md file inside the archive for details.<br><br><b>merged_pairs.zip:</b> Merged pairs from the rpoB and 16S rRNA data after the quality control step, removal of primers, and additional removal of low quality sequences. The sequences are in FASTA format.<br><br><b>rpoB_database.zip:</b> Curated database of 627 rpoB gene sequences used for taxonomic assignment of a representative sequence of an rpoB-based OTU. <i>Halobacteria.rpoB.627.fa</i> file contains nucleotide sequences in FASTA format. <i>Halobacteria.rpoB.627.taxonomy</i> file contains the taxonomic information for each sequence.<br><br><b>OTU_tables_and_rep_seqs.zip</b>: OTU tables for rpoB- and 16S rRNA-based OTUs (<i>otu_table.rpoB.txt</i> and <i>otu_table.16S.txt</i> files). Each row represents an OTU. Each column represent a sample. Values in the table show how many assembled contigs are in an OTU. Nucleotide sequences of chosen to represent each OTU are provided in rep_set_rpoB.fna and rep_set_16S.fna files, in FASTA format.<br><br>
DOI: 10.6084/m9.figshare.12609068.v1
title: Supplementary Data for Hua et al. (2020)

description: This dataset contains supplementary data for the analyses presented in:<br><br>Zhengshuang Hua, Matthew Ouellette, Andrea M. Makkay, R. Thane Papke, and Olga Zhaxybayeva. <i>Nutrient supplementation experiments on saltern microbial communities support utilization of DNA as a source of phosphorus</i> (under review).<br><br><b>Dataset contents:<br></b><br><b>Quality_Control_script.zip:</b> In-house Perl script used for quality control processing of raw Illumina reads. See README.md file inside the archive for details.<br><br><b>assembled_contigs.zip:</b> Contigs assembled from the rpoB and 16S rRNA data after the quality control step, removal of primers, and additional removal of low quality contigs. The sequences are in FASTA format.<br><br><b>rpoB_database.zip:</b> Curated database of 627 rpoB gene sequences used for taxonomic assignment of a representative sequence of an rpoB-based OTU. <i>Halobacteria.rpoB.627.fa</i> file contains nucleotide sequences in FASTA format. <i>Halobacteria.rpoB.627.taxonomy</i> file contains the taxonomic information for each sequence.<br><br><b>OTU_tables_and_rep_seqs.zip</b>: OTU tables for rpoB- and 16S rRNA-based OTUs (<i>otu_table.rpoB.txt</i> and <i>otu_table.16S.txt</i> files). Each row represents an OTU. Each column represent a sample. Values in the table show how many assembled contigs are in an OTU. Nucleotide sequences of chosen to represent each OTU are provided in rep_set_rpoB.fna and rep_set_16S.fna files, in FASTA format.<br><br>
DOI: 10.35111/jeck-hv79
title: Global TIMIT Learner Treebank English

description: 
<br><br>Introduction
<br><br>
<br><br>Global TIMIT Learner Treebank English was developed by the Linguistic Data Consortium and LAIX Inc. and consists of approximately 24 hours of L1 and L2 English read speech and transcripts.
<br><br>
<br><br>The Global TIMIT project aimed to create a series of corpora in a variety of languages with a similar set of key features as in the original TIMIT Acoustic-Phonetic Continuous Speech Corpus (LDC93S1) which was designed for acoustic-phonetic studies and for the development and evaluation of automatic speech recognition systems. Specifically, these features include:
<br><br>
<br><br>    A large number of fluently-read sentences, containing a representative sample of phonetic, lexical, syntactic, semantic, and pragmatic patterns
<br><br>    A relatively large number of speakers
<br><br>    Time-aligned lexical and phonetic transcription of all utterances
<br><br>    Some sentences read by all speakers, others read by a few speakers, and others read by just one speaker
<br><br>
<br><br>Data
<br><br>
<br><br>Global TIMIT Learner Treebank English consists of two separate data sets of 50 speakers reading 120 sentences from Treebank-3 (LDC99T42). Among the 120 sentences, 20 sentences were read by all speakers, 40 sentences were read by 10 speakers, and 60 sentences were read by one speaker, for a total of 3220 sentence types.
<br><br>
<br><br>L1 English Treebank was recorded at the University of Pennsylvania, USA; participants were 25 female and 25 male native American English speakers. L2 English Treebank was recorded at LAIX Inc., Shanghai, China. L2 speakers (25 female, 25 male) were Chinese learners of English considered fluent and who had passed specified standards on English assessment tests.
<br><br>
<br><br>All speech data are presented as 16kHz, 16-bit flac compressed wav files. Each file has accompanying phone and word segmentation files, sentence parse trees, and Praat TextGrid files.
<br><br>Samples
<br><br>
<br><br>Please view the following samples:
<br><br>
<br><br>    L1 Audio (FLAC)
<br><br>    L1 Word (TXT)
<br><br>    L1 Phones (TXT)
<br><br>    L1 Tree (TXT)
<br><br>    L1 TextGrid (TXT)
<br><br>    L2 Audio (FLAC)
<br><br>    L2 Word (TXT)
<br><br>    L2 Phones (TXT)
<br><br>    L2 Tree (TXT)
<br><br>    L2 TextGrid (TXT)
<br><br>
<br><br>Updates
<br><br>
<br><br>None at this time.
<br><br>Copyright
<br><br>Portions © 1987-1989 Dow Jones & Company, Inc., © 1993-1995, 1999, 2020 Trustees of the University of Pennsylvania
<br><br>