cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.17156033
title: ChromoDB Source Data: Chromosome counts from the IAPT/IOPB chromosome data series

description: This dataset contains 32,327 curated chromosome count records and 1,713 bibliographic references extracted from the IAPT/IOPB chromosome data series (including - IOPB Chromosome Number Reports, IOPB Chromosome Data and IAPT/IOPB Chromosome Data).

It is part of ChromoDB, an initiative aimed at building a comprehensive, curated, and openly accessible database of plant cytogenetics.

The dataset is provided as two relational CSV files (records and bibliography), linked through a common identifier (bib_id). An additional field subseries specifies the origin of each record, and the field volume_pages consolidates bibliographic pagination details.

Data are released under a CC-BY 4.0 license and are intended for reuse in research on plant taxonomy, cytogenetics, evolutionary biology, and biodiversity conservation.
DOI: 10.15468/dl.773zdu
title: Occurrence Download

description: A dataset containing 46089 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-113.09501 -23.68074,-36.80823 -23.68074,-36.80823 28.65691,-113.09501 28.65691,-113.09501 -23.68074))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Megaptera novaeangliae",
 "Year 2000-2024"
 ]
}

 The dataset includes 46089 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009108-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17719557
title: Ipseity Daily Data

description: At what rate do individuals say they are X?

Begining on 2025-07-08, I surveyed a small random sample of American adults on a daily cadence.  They responded to many items of the form: Does <signifier> describe you today?

The file ipseity-daily-aggregated.csv in this repository contains the aggregated results through 2025-07-28.  The columns are as follows:



signifier - a word, phrase or emoji

yes_count - the number of respondents who answered yes (aggregated all-time).

no_count - the number of respondents who answered no (aggregated all-time).

prevalence_per_10k - an estimate of the prevalence per 10,000.  If we were to survey 10,000 American adults, how many would we expect to respond yes to this signifier?  The number is calculated as yes_count / (yes_count + no_count) * 10,000.

earliest_obs_date - this date represents the first time this particular signifier was ever displayed to a respondent.  Signifiers are chosen with stochasticity from a long list; new signifiers are sometimes added, old signifiers are sometimes deleted, and a signifier may be moved higher or lower in priority for sampling.

latest_obs_date - the date closest to the present date on which signifier was most recently presented to a respondent.


Version created on 2025-11-26 — cumulative data.
DOI: 10.15468/dl.cdb9h4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Backeljaia gigaxii, Strongylura timucu, Bostryx agueroi, Naranjia, Anteaeolidiella takanosimensis, Haminoea alfredensis, Siphonaria lessonii, Aprionus betulae, Phaedusa angustocostata, Hiltrudia mathildae, Phyllonorycter mespilella, Zelentia nepunicea, Prophysaon dubium, Rondibilis, Thuridilla virgata, Ena montana, Astyloneura assimilis, Solaropsis, Quantula, Naranjia, Philinoglossa, Lindholmiola reischuetzi, Armina variolosa, Meledella werneri, Hedleyropa yarrangobillyensis, Phestilla minor, Echonitor cyrtochilus, Macrochlamys indica, Ampullaceana balthica, Palio dubia, Nephus redtenbacheri, Flabellina cavolini, Siphonaria japonica)",
 "StateProvince is Tasmania"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009110-251120083545085/datasets/export for details.
DOI: 10.7910/dvn/eb2ebb
title: PDB - 5VL3: CD22 d1-d3, random seed 2 (311K, 38°C,100 ns)

description: PDB - 5VL3: CD22 d1-d3, random seed 2 (311K, 38°C,100 ns).
DOI: 10.15468/dl.qy42k6
title: Occurrence Download

description: A dataset containing 880274 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aythya affinis, Aythya americana, Aythya collaris, Aythya ferina, Aythya marila)",
 "Country is Canada",
 "OccurrenceStatus is Present",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2000",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON ((-84.76571 41.22334, -58.93394 41.22334, -58.93394 49.85477, -84.76571 49.85477, -84.76571 41.22334))",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 880274 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009099-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ts7fr7
title: Occurrence Download

description: A dataset containing 135 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Backeljaia gigaxii, Strongylura timucu, Bostryx agueroi, Naranjia, Anteaeolidiella takanosimensis, Haminoea alfredensis, Siphonaria lessonii, Aprionus betulae, Phaedusa angustocostata, Hiltrudia mathildae, Phyllonorycter mespilella, Zelentia nepunicea, Prophysaon dubium, Rondibilis, Thuridilla virgata, Ena montana, Astyloneura assimilis, Solaropsis, Quantula, Naranjia, Philinoglossa, Lindholmiola reischuetzi, Armina variolosa, Meledella werneri, Hedleyropa yarrangobillyensis, Phestilla minor, Echonitor cyrtochilus, Macrochlamys indica, Ampullaceana balthica, Palio dubia, Nephus redtenbacheri, Flabellina cavolini, Siphonaria japonica)",
 "Country is Australia"
 ]
}

 The dataset includes 135 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009113-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17719601
title: COVID-19-Todesfälle in Deutschland

description: Im Datensatz "COVID-19-Todesfälle in Deutschland" des Robert Koch-Instituts werden täglich aktualisierte Informationen zu COVID-19-bedingten Todesfällen in Deutschland bereitgestellt. Die Datenerhebung erfolgt im Rahmen des Infektionsschutzgesetzes (IfSG). Der Datensatz umfasst aggregierte Todesfallzahlen nach Berichtsdatum, Altersgruppen und Bundesländern und wird ergänzt durch den Fall-Verstorbenen-Anteil. Der Datensatz ermöglicht fundierte Analysen zur Bewertung der Krankheitsschwere und Verbreitung von COVID-19 in Deutschland.
DOI: 10.5281/zenodo.17698216
title: Dataset for "Identification of short cycle productive sweet potato varieties for food security in Côte d'Ivoire"

description: This repository contains the full agronomic dataset used in the article:

“Identification of short cycle productive sweet potato varieties for food security in Côte d’Ivoire.”

The data were collected during two consecutive field seasons (2022 and 2023) at the CNRA Root and Tuber Crops Research Station in Bouaké, Côte d’Ivoire. Thirty-three sweet-potato accessions were evaluated under an alpha-lattice split-plot design with four harvest dates.

The dataset includes all raw measurements used for statistical analyses such as ANOVA, principal-component analysis (PCA), clustering, and precocity index calculations.

More details are provided in the Readme file.
DOI: 10.5281/zenodo.17698215
title: Dataset for "Identification of short cycle productive sweet potato varieties for food security in Côte d'Ivoire"

description: This repository contains the full agronomic dataset used in the article:

“Identification of short cycle productive sweet potato varieties for food security in Côte d’Ivoire.”

The data were collected during two consecutive field seasons (2022 and 2023) at the CNRA Root and Tuber Crops Research Station in Bouaké, Côte d’Ivoire. Thirty-three sweet-potato accessions were evaluated under an alpha-lattice split-plot design with four harvest dates.

The dataset includes all raw measurements used for statistical analyses such as ANOVA, principal-component analysis (PCA), clustering, and precocity index calculations.

More details are provided in the Readme file.
DOI: 10.5281/zenodo.17719599
title: 7-Tage-Inzidenz der COVID-19-Fälle in Deutschland

description: Im Datensatz "7-Tage-Inzidenz der COVID-19-Fälle in Deutschland" des Robert Koch-Instituts werden die täglich aktualisierten COVID-19-Inzidenzen auf Bundes-, Landes- und Landkreisebene basierend auf den Meldungen nach dem Infektionsschutzgesetz (IfSG) bereitgestellt. Die 7-Tage-Inzidenz wird definiert als Anzahl gemeldeter Fälle der letzten sieben Tage pro 100.000 Einwohner:innen und differenziert nach Altersgruppen und Regionen. Die Datenverarbeitung erfolgt vollständig elektronisch über das Deutsche Elektronische Melde- und Informationssystem (DEMIS).
DOI: 10.6084/m9.figshare.30336400.v2
title: Data of all figures

description: Sepsis, a life-threatening organ dysfunction caused by dysregulated host responses to infection, often leads to sepsis-associated acute lung injury (SALI), a major contributor to mortality. Spermidine (SPD), a natural polyamine with anti-inflammatory and metabolic regulatory properties, has emerged as a potential nutritional adjunct for sepsis management. However, whether and how SPD ameliorates SALI remains to be elucidated. Here, cecal ligation and puncture (CLP) was performed in rats to simulate sepsis. Rat survival, lung injury score, Dry/Wet ratio, histopathology, cytokine levels and immunohistochemical analysis were analyzed to evaluate SPD’s effects on SALI. Targeted metabolomics, molecular docking and cellular thermal shift assay (CETSA) identified AMP-activated protein kinase (AMPK) as an underlying target of SPD’s action. <i>In vitro</i> investigations were based on lipopolysaccharide (LPS)-stimulated bone marrow-derived macrophages (BMDMs), with flow cytometry assessing apoptosis. AMPK inhibitor (Compound C) and downstream signaling were examined <i>in vivo</i> and <i>in vitro</i> through q-PCR and Western blot experiments. Consequently, SPD improved rat survival, reduced lung injury, and decreased pro-inflammatory cytokines in CLP rats. Metabolomics, molecular docking and CETSA suggested AMPK-mediated energy metabolism modulation. Mechanistically, SPD attenuated necroptosis via AMPK/RIPK1/MLKL signaling. Moreover, Compound C counteracted the protective effect of SPD on SALI <i>in vivo</i> and <i>in vitro</i>. Our findings evidence that SPD significantly ameliorates SALI via the regulation of AMPK-mediated necroptosis. SPD supplementation may serve as a complementary therapeutic approach, warranting further investigation in subsequent clinical trials for sepsis treatment.
DOI: 10.15468/dl.5pkkdr
title: Occurrence Download

description: A dataset containing 203397 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Poaceae",
 "GadmGid is one of (USA.6_1, USA.17_1, USA.27_1, USA.28_1, USA.32_1, USA.35_1, USA.37_1, USA.42_1, USA.44_1, USA.51_1)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Human Observation, Machine Observation)"
 ]
}

 The dataset includes 203397 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009104-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/rizha5
title: PDB - 5VL3: CD22 d1-d3, random seed 2 (312K, 39°C,100 ns)

description: PDB - 5VL3: CD22 d1-d3, random seed 2 (312K, 39°C,100 ns).
DOI: 10.15468/dl.7yz355
title: Occurrence Download

description: A dataset containing 19591 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Linepithema humile"
 ]
}

 The dataset includes 19591 records from 141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009115-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17718638
title: Generalizing Large Language Models' Hyperparameters and Prompting for Code Generation: Removing the Blindspot - Replication Package

description: The file attached is the replication package for the experiments presented in the paper “Generalizing Large Language Models’ Hyperparameters and Prompting for Code Generation: Removing the Blindspot”. This package contains the code generation tasks, prompts, source code for code generation, generated code, source code for code evaluation, and code evaluation results.
DOI: 10.5281/zenodo.17718637
title: Generalizing Large Language Models' Hyperparameters and Prompting for Code Generation: Removing the Blindspot - Replication Package

description: The file attached is the replication package for the experiments presented in the paper “Generalizing Large Language Models’ Hyperparameters and Prompting for Code Generation: Removing the Blindspot”. This package contains the code generation tasks, prompts, source code for code generation, generated code, source code for code evaluation, and code evaluation results.
DOI: 10.15468/dl.cjtqwy
title: Occurrence Download

description: A dataset containing 7907 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Populus deltoides",
 "GadmGid is one of (USA.6_1, USA.17_1, USA.27_1, USA.28_1, USA.32_1, USA.35_1, USA.37_1, USA.42_1, USA.44_1, USA.51_1)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Human Observation, Machine Observation)"
 ]
}

 The dataset includes 7907 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009116-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q55euz
title: Occurrence Download

description: A dataset containing 25351 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Solenopsis invicta"
 ]
}

 The dataset includes 25351 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009117-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fjfzx8
title: Occurrence Download

description: A dataset containing 15232 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Paratrechina longicornis"
 ]
}

 The dataset includes 15232 records from 156 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009118-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/4gqp6i
title: PDB - 5VL3: CD22 d1-d3, random seed 2 (313K, 40°C,100 ns)

description: PDB - 5VL3: CD22 d1-d3, random seed 2 (313K, 40°C,100 ns).
DOI: 10.15468/dl.axf2bq
title: Occurrence Download

description: A dataset containing 3092 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tetramorium simillimum"
 ]
}

 The dataset includes 3092 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009120-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jd5yfs
title: Occurrence Download

description: A dataset containing 1091 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is South Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Solanum nigrum"
 ]
}

 The dataset includes 1091 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009121-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kfc5a3
title: Occurrence Download

description: A dataset containing 4525 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tetramorium bicarinatum"
 ]
}

 The dataset includes 4525 records from 96 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009119-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jkfdzy
title: Occurrence Download

description: A dataset containing 4513 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Portulaca oleracea",
 "GadmGid is one of (USA.6_1, USA.17_1, USA.27_1, USA.28_1, USA.32_1, USA.35_1, USA.37_1, USA.42_1, USA.44_1, USA.51_1)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Human Observation, Machine Observation)"
 ]
}

 The dataset includes 4513 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009122-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28881749.v9
title: 3D-GloBFP: the first global three-dimensional building footprint dataset (PART Ⅱ, grid ID: 401-699)

description: The 3D Global Building Footprints (3D-GloBFP) dataset is the first global-scale building height dataset at the individual building footprint level for the year 2020, generated through the integration of multisource Earth Observation (EO) data and the extreme gradient boosting (XGBoost) model. The reliability and accuracy of 3D-GloBFP have been validated across 33 subregions, achieving R² values ranging from 0.66 to 0.96 and root-mean-square errors (RMSEs) between 1.9 m and 14.6 m. The dataset is divided into spatial grid-based tiles, each stored as an individual ShapeFile (.shp) containing estimated building heights (in meters) in attribute tables. See world_grid.shp and readme.txt at https://doi.org/10.5281/zenodo.11319912 for grid partitioning and naming details.
DOI: 10.17909/qt4t-dz57
title: HST and JWST Imaging of the Spiderweb Protocluster at z~2.16 (Programs 1572, 10327, 17117)

description: This dataset comprises multi-wavelength imaging observations of the Spiderweb Protocluster (PKS 1138-262) at z~2.16 using HST and JWST. The data include:

- HST/ACS imaging in F475W and F814W filters (Program 10327)
- HST/WFC3 imaging in F160W filter (Program 17117)  
- JWST/NIRCam imaging in F115W, F182M, and F410M filters (Program 1572, PI: Dannerbauer, Co-PI: Koyama)
DOI: 10.15468/dl.bsc9dq
title: Occurrence Download

description: A dataset containing 235 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is South Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Solanum americanum"
 ]
}

 The dataset includes 235 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009123-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30718142
title: "Scale-dependent effects of tree diversity on above- versus below-ground biomass partitioning" dataset

description: This dataset integrates field-measured and model-predicted data from 332,531 forest plots worldwide to facilitate the study of above- and below-ground biomass partitioning in relation to biodiversity and environmental factors.The core data were synthesized from two primary sources:<b>Root Mass Fraction (RMF):</b> Plot-level RMF values were derived from a global map of root-shoot ratio (RSR) generated by Ma et al. (2021) using random forest modeling at a 30 arcsec resolution. The original RMF calculation is based on 13,499 forest plot records.<b>Biodiversity and Productivity:</b> Tree species richness (S) and primary site productivity (P, measured as periodic annual increment in stem volume) were obtained from the Global Forest Biodiversity (GFB) initiative, which aggregates data from 777,126 permanent plots. URL - References http://science.sciencemag.org/content/354/6309/aaf8957.abstract?ijkey=RKRNpnVI10Em2&keytype=ref&siteid=sciTo create a unified dataset, RMF, S, and P values were extracted for coinciding locations. A spatial de-duplication process was applied using a 0.01-degree window to calculate mean values for each unique location, resulting in the final 332,531 plots.The dataset is enriched with key environmental variables to support ecological modeling:<b>Climate Data:</b> Six bioclimatic variables from WorldClim (v1.4), including mean annual temperature, temperature seasonality, mean annual precipitation, and precipitation seasonality.<b>Soil Data:</b> Eight soil properties from the Harmonized World Soil Database, including soil organic carbon, pH, texture (sand, silt), and bulk density.Each plot is classified by ecoregion (based on the WWF classification) and plot size, making it ideal for investigating scale-dependent and biome-specific ecological patterns.
DOI: 10.6084/m9.figshare.30718142.v1
title: "Scale-dependent effects of tree diversity on above- versus below-ground biomass partitioning" dataset

description: This dataset integrates field-measured and model-predicted data from 332,531 forest plots worldwide to facilitate the study of above- and below-ground biomass partitioning in relation to biodiversity and environmental factors.The core data were synthesized from two primary sources:<b>Root Mass Fraction (RMF):</b> Plot-level RMF values were derived from a global map of root-shoot ratio (RSR) generated by Ma et al. (2021) using random forest modeling at a 30 arcsec resolution. The original RMF calculation is based on 13,499 forest plot records.<b>Biodiversity and Productivity:</b> Tree species richness (S) and primary site productivity (P, measured as periodic annual increment in stem volume) were obtained from the Global Forest Biodiversity (GFB) initiative, which aggregates data from 777,126 permanent plots. URL - References http://science.sciencemag.org/content/354/6309/aaf8957.abstract?ijkey=RKRNpnVI10Em2&keytype=ref&siteid=sciTo create a unified dataset, RMF, S, and P values were extracted for coinciding locations. A spatial de-duplication process was applied using a 0.01-degree window to calculate mean values for each unique location, resulting in the final 332,531 plots.The dataset is enriched with key environmental variables to support ecological modeling:<b>Climate Data:</b> Six bioclimatic variables from WorldClim (v1.4), including mean annual temperature, temperature seasonality, mean annual precipitation, and precipitation seasonality.<b>Soil Data:</b> Eight soil properties from the Harmonized World Soil Database, including soil organic carbon, pH, texture (sand, silt), and bulk density.Each plot is classified by ecoregion (based on the WWF classification) and plot size, making it ideal for investigating scale-dependent and biome-specific ecological patterns.
DOI: 10.15468/dl.dz8zyr
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is South Africa",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Solanum villosum"
 ]
}

 The dataset includes 16 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009124-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.