cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28348340.v1
title: Historical nursery catalogues provide insight into introduction history, lag times, and traits of invasive ornamental plants in New Zealand

description: Data on introduced plant species occurrence in ornamental nursery catalogues in New Zealand stretching from 1861 to 1992, combined with data on naturalization dates and plant traits. These data have been used to assess lag time between introduction and naturalization and to assess difference in traits between naturalized species and species classified as invasive in natural areas.We used nursery catalogues to estimate the date of introduction for both naturalized and non-naturalized ornamental species, and then calculated the lag time between introduction and naturalization. Some naturalized species were designated as invasive in natural areas, while others were not. We compared lag times between these groups of species, and accounted for woodiness, minimum residence time, and frequency with which the species were sold in catalogues over time.These analyses are described in the following manuscript:Bufford, JL, Dawes TN, Hulme PE. 2025. Species that invade natural areas have shorter lag times than other naturalized ornamental species. Ecography. DOI: 10.1111/ecog.07721We also tested whether traits and introduction history differed between introduced, naturalized and invasive species. We used boosted regression trees to assess whether naturalized or invasive species had greater introduction effort (frequency in catalogues), hardiness traits (wet/drought tolerance, cold hardiness, sun/shade tolerance, soil pH range), growth traits (maximum height, deciduousness), reproductive traits (vegetative, root, and/or seed reproduction), or family propensity towards invasiveness.These analyses are described in the following manuscript:Dawes TN, Bufford, JL, Hulme PE. 2025. Historical frequency of plants in nursery catalogues predicts likelihood of naturalization in ornamental species. Ecological Applications. DOI: 10.1002/eap.70023The full dataset (Ornamental Species from Nursery Catalogues.xlsx) includes a data sheet and a metadata sheet, which provides definitions for all of the columns in the data and indicates which data were used in each analysis. Data include: species name; first year recorded in a catalogue; frequency in catalogues; year of naturalization; status as introduced, naturalized or invasive in natural areas; and a range of species traits. For details on data sources, please see the published manuscripts.We also include the list of the genera we searched for in the nursery catalogues (List of Target Genera.csv). These genera represent the genera of all species classified as invasive in natural areas in New Zealand and any taxonomic names previously associated with those species. Species classified as invasive in natural areas in New Zealand were taken from: Howell, C. (2008). Consolidated list of environmental weeds in New Zealand. <i>DOC Research & Development Series</i>, <i>292</i>, 42.<br>
DOI: 10.17632/c4kvxf85rd
title: Data for: Closed Form Relationships of Temperature Effectiveness of Cross-flow Heat Exchangers

description: These are numerical codes in MAPLE to compute the temperature effectiveness of cross-flow heat exchnagers with commonly used configurations.
DOI: 10.17632/hynxtg9fd4
title: Rainfall Measurements

description: This dataset includes stormwise rainfall at 1-min time interval for the arid region of India. The data represents two-year rainfall monitoring for all the storms that occurred in the area. The rainfall was recorded using a digital raingauge (tipping bucket mechanism) and the rainfall values on daily basis were verified from the daily rainfall values recorded through non-recording type ordinary rain gauge installed in the meteorological observatory situated nearby the site.
DOI: 10.17632/rrg4pnm36z
title: The Neuropsychiatric Phenotype of anti-NMDAr Encephalitis

description: A prospective and longitudinal study was conducted, with patients admitted to the National Institute of Neurology and Neurosurgery of Mexico, who fulfilled criteria for possible autoimmune encephalitis along a time window of seven years. Systematic clinical assessments were conducted before knowing NMDAR antibodies' results, including a bespoke inventory to register a broad scope of neuropsychiatric features, and different scales to measure the behavioral, cognitive, and functional features. CSF antibodies against the NR1 subunit of the NMDA receptor were processed with rat brain immunohistochemistry and cell-based assays with NMDA expressing cells.  Outcome measures were registered.
DOI: 10.17632/wkbmk9x9xf
title: Data for: The Long-Term Determinants of Female HIV Infection in Africa: The Slave Trade, Polygyny, and Sexual Behavior

description: Data and do-files
DOI: 10.26091/esrnz.15062907.v3
title: ESR response to NISTIR 8351 - DRAFT DNA Mixture Interpretation: A NIST Scientific Foundation Review

description: In a response to <b>NISTIR 8351 - DRAFT DNA Mixture Interpretation: A NIST Scientific</b> <b>Foundation Review </b>we have supplied summary data for each profile for a number of different published papers. These include: 1. Bright J-A, Richards R, Kruijver M, Kelly H, McGovern C, Magee A, et al. Internal validation of STRmix™ – A multi laboratory response to PCAST. Forensic Sci Int Genet. 2018;34:11-24. 2. Buckleton JS, Pugh SN, Bright J-A, Taylor DA, Curran JM, Kruijver M, et al. Are low LRs reliable? Forensic Sci Int Genet. 2020 2020/11/01/;49:102350. 3. Kelly H, Bright J-A, Kruijver M, Cooper S, Taylor D, Duke K, et al. A sensitivity analysis to determine the robustness of STRmix™ with respect to laboratory calibration. Forensic Sci Int Genet. 2018 7//;35:113-22. 4. Lin M-H, Bright J-A, Pugh SN, Buckleton JS. The interpretation of mixed DNA profiles from a mother, father, and child trio. Forensic Sci Int Genet. 2020 2020/01/01/;44:102175. 5. Bille T, Weitz S, Buckleton JS, Bright J-A. Interpreting a major component from a mixed DNA profile with an unknown number of minor contributors. Forensic Sci Int Genet. 2019 2019/05/01/;40:150-9. 6. Buckleton JS, Bright J-A, Cheng K, Budowle B, Coble MD. NIST Interlaboratory Studies Involving DNA Mixtures (MIX13): A modern analysis. Forensic Sci Int Genet. 2018;37:172-9. In addition, ESR’s official response to the Draft Scientific Foundational Review is available.
DOI: 10.17632/v472w8sc3x
title: Tea farmer data & analysis

description: Tea farmer data & analysis
DOI: 10.6084/m9.figshare.13027124.v2
title: Athlete_Non-Athlete MH Survey - ALL DATA.xlsx

description: Data was collected on athlete mental health as the united kingdom emerged from their COVID-19 lockdown using non-athletes as a comparison. Data was collected on athletic identity, resilience, wellbeing, depression, anxiety and loneliness through an online survey using the Mental Health Continuum (Keyes, 2005), Hospital Anxiety and Depression Scale (Zigmond and Snaith, 1983), the Brief Resilience Scale (Smith et al., 2008), the Short Loneliness Scale (Gierveld and Tilburg, 2006) and the Athletic Identity Measurement Scale (Brewer et al., 1993). Ethical approval was granted by the Ulster University Research Ethics Filter Committee. No personal identifying information was collected. Participants were all over the age of 18.
DOI: 10.6084/m9.figshare.28089455.v1
title: Supplementary Material for: Cardiovascular and Kidney Outcomes of Glucagon-Like Peptide 1 Receptor Agonist Therapy in Type 2 Diabetes Mellitus and Chronic Kidney Disease: A Systematic Review and Meta-Analysis

description: Introduction: The effects of glucagon-like receptor 1 receptor agonists (GLP-1 RA) in patients with diabetes and established chronic kidney disease (CKD) remain unclear. 
Methods: We systematically searched PubMed, Embase, and Cochrane Library from inception to May 2024 for randomized controlled trials (RCTs) and respective post-hoc studies comparing GLP-1 RAs versus placebo in patients with type 2 diabetes mellitus (T2DM) and established CKD (as per study definition or otherwise defined as having an estimated glomerular filtration rate less than 60 mL/min/1.73m2 and/or urine albumin-to-creatinine ratio more than 30 mg/g). We applied a random-effects model to pool risk ratios (RR), hazard ratios (HR) and 95% confidence intervals (CI). 
Results: We included 10 RCTs and post-hoc analyses comprising 18,042 patients, of whom 9,164 (50.8%) were treated with GLP-1 RAs. There were significantly lower rates of major adverse kidney events (RR 0.82; 95% CI 0.74–0.90; p&lt;0.001; high certainty) and a slightly lower incidence of all-cause mortality (HR 0.84; 95% CI 0.71–1.00; p=0.046; moderate certainty) with the use of GLP-1 RAs relative to placebo. This kidney protection remained consistent in patients with stage 3b CKD (RR 0.78; 95% CI 0.65–0.94; p=0.009; high certainty). No significant differences were observed in major adverse cardiovascular events (HR 0.89; 95% CI 0.78–1.02; p=0.090; low certainty) or cardiovascular mortality (HR 0.80; 95% CI 0.60–1.09; p=0.155; very low certainty), possibly due to a lack of statistical power. 
Conclusion: GLP-1 RAs were tied to a lower incidence of all-cause mortality and major adverse kidney events in patients with T2DM and established CKD.
DOI: 10.6084/m9.figshare.28220375.v1
title: Supplementary Material for: Perfusion image-aided treatment decision for acute ischemic stroke: validation of a clinical decision support system

description: Introduction: Our collaborative team has previously developed a prognostic model for acute ischemic stroke (AIS). This model, known as the clinical decision support system (CDSS), aims to provide personalized assistance to clinicians in making treatment decisions and improving patient prognosis. The objective of this study was to externally validate the model using Chinese AIS patients. 
Methods: All enrolled patients arrived at the hospital within 24 hours after stroke onset. The primary outcome was the likelihood of a favorable functional outcome, which was defined as a modified Rankin Scale (mRS) &lt; 2 at 90 days. The model's predictive performance was evaluated by assessing its discriminative power (area under the curve, AUC) and calibration power (Hosmer-Lemeshow goodness-of-fit test, Brier score).
Results: In the validation cohort of 298 patients, the model demonstrated a moderate discriminatory ability to predict a favorable functional outcome (mRS 0-1), with an AUC of 0.805 (95% CI, 0.756-0.849). The calibration performance of the model was assessed using the Hosmer-Lemeshow chi-squared test, yielding a value of 9.211 and a p-value of 0.325 additionally, the Brier score for the prediction of a good outcome was 0.153, further supporting the model's good calibration performance.
Conclusion: The study introduces the CDSS that integrates clinical baseline data and imaging indicators of brain perfusion status. This CDSS provides clinicians with an intuitive risk assessment of different treatment strategies for AIS patients. Moreover, the CDSS highlights substantial variations in treatment outcomes among patients, suggesting that it has the potential to significantly enhance personalized treatment approaches.
DOI: 10.17632/t3k9z968h2
title: Factors Influencing Entrepreneurial Intention of the Senior High School Students

description: Entrepreneurial intention is the foundation for any decision to start a business or endeavor, making it a more significant predictor of future entrepreneurial participation. Since it is the most critical predictor of entrepreneurial behavior and a crucial component in comprehending the process of launching new business ventures, this study aimed to identify the factors that influence the entrepreneurial intentions of the Senior High School Students of St. Paul University Surigao. This study applied the quantitative research design employing a descriptive survey technique with 275 respondents. The main instrument employed in gathering necessary data was the researcher-made questionnaire. The collected data were treated using sample percentage, mean and standard deviation, and analysis of variance (ANOVA). The results showed a significant difference in the factors influencing the entrepreneurial intention of the senior high school students when grouped according to their family business and strand. The research results could serve as background knowledge and a framework for future researchers doing deeper investigations similar to this study.
DOI: 10.6084/m9.figshare.21673928.v1
title: Functional imaging through scattering medium via fluorescence speckle demixing and localization - Datasets

description: Datasets for the results in:<br> <br> F. Soldevila, C. Moretti, T. Nöbauer, H. Sarafraz, A. Vaziri, and S. Gigan, "Functional imaging through scattering medium via fluorescence speckle demixing and localization," Opt. Express <strong>31</strong>, 21107-21117 (2023) <br> https://opg.optica.org/oe/fulltext.cfm?uri=oe-31-13-21107&id=531357<br> <br> <br> Repository with the codes at: https://github.com/comediaLKB/specklelocate
DOI: 10.6084/m9.figshare.22273054.v4
title: Data tables and supporting information for the paper entitled “Ground surface temperature history since 20 kyr BP in Northeast Asia: Reconstructions from the borehole geotherms of the International Continental Scientific Drilling Project (ICDP) SK-2e”

description: Data tables and supporting information for the paper entitled “Ground surface temperature history since the Last Glacial Maximum in Northeast Asia: Reconstructions from the borehole geotherms of the International Continental Scientific Drilling Program”
DOI: 10.6084/m9.figshare.28531178.v1
title: Appendix_Jentzsch_et_al.pdf

description: We investigated the variation in complexity of the lower first molar M1 of the common pine vole Microtus subterraneus. Eight different morphotypes were found. The M1 with additional structures were significantly longer compared to the ‘typica’ morph (P = 0.022). This structural gain is not caused by alternating dentin triangles, as known from Microtus arvalis or M. agrestis, but by a second ‘pitymys’ field in combination with a complete anterior lobus. This morphotype is named ‘pitymys +’. Two possible routes towards increased complexity are described and are depicted schematically. It depends on whether initially the anterior lobus narrows to the ‘maskii’ morph and the new and complete anterior lobe will be constricted in the following step out of the remaining loop. Alternatively, additional anticlines are first formed at the anterior lobe, and the constriction of the second ‘pitymys’ rhombus takes place in the next step.
DOI: 10.6084/m9.figshare.1046664.v1
title: DNA-based species delimitation in algae

description: Given the problems of species delimitation in algae using morphology or sexual compatibility, molecular data are becoming the standard for delimiting species and testing their traditional boundaries. The idea that species are separately evolving metapopulation lineages, along with theoretical progress in phylogenetic and population genetic analyses, has led to the development of new methods of species delimitation. We review these recent developments in DNA-based species delimitation methods, and discuss how they have changed and continue to change our understanding of algal species boundaries. Although single-locus approaches have proven effective for a first rapid and large-scale assessment of species diversity, species delimitation based on single gene trees falls short due to gene tree–species tree incongruence, caused by confounding processes like incomplete lineage sorting, trans-species polymorphism, hybridization and introgression. Data from unlinked loci and multi-species coalescent methods, which combine principles from phylogenetics and population genetics, may now be able to account for these complicating factors. Several of these methods also provide statistical support regarding species boundaries, which is important because speciation is a process and therefore uncertainty about precise species boundaries is inevitable in recently diverged lineages.
DOI: 10.6084/m9.figshare.23742231.v3
title: Optogenetic confirmation of transverse-tubular membrane excitability in intact cardiac myocytes

description: Excel file containing all raw data, Origin Lab files for each independent panel, and raw images.Data are related to:<b>Figure 1: Patch-clamp recordings on CTRL and DETUB cells.</b><b>Figure 2: </b><b><i>In silico </i></b><b>prediction of TT membrane excitability.</b><b>Figure 3: All-optical AP recording in TT and SS membrane sites of CTRL cardiomyocytes.</b><b>Figure 4: eGFP-Cheriff characterization.</b><b>Figure 5: All-optical AP recording in TT and SS membrane sites of DETUB cardiomyocytes.</b><b>Figure 6: Loss of excitability of detached t-tubules.</b><b>Figure 7: Changes of TT ion concentrations</b><br>
DOI: 10.6084/m9.figshare.19768360.v1
title: berglund2018spatial_ST_melanoma

description: berglund2018spatial_ST_melanoma is a spatial transcriptomics datasets of stage III cutaneous malignant melanoma67. The published paper adapted the technology of spatial transcriptomics (ST) to melanoma lymph node biopsies and successfully sequenced the transcriptomes of over 2,200 tissue domains. There are 8 sub-datasets in berglund2018spatial_ST_melanoma with ~16000 gene expression features, which contains 4 stage III cutaneous malignant melanoma patients in duplicate. The number of spots inf each sub-dataset are 279 (mel1_rep1), 293 (mel1_rep2), 383 (mel2_rep1), 380 (mel2_rep2), 256 (mel3_rep1), 294 (mel3_rep2), 212 (mel4_rep1) and 248 (mel4_rep2). The count matrix of berglund2018spatial_ST_melanoma dataset was downloaded from https://www.spatialresearch.org/resources-published-datasets/.
DOI: 10.6084/m9.figshare.28810667.v3
title: Imaging Ng2:DsRed+ Murine Retina over 6 Hours in Culture

description: Murine retinal explant from an Ng2/Cspg4:DsRed/+ animal cultured in Dulbecco's Modified Eagle Medium (DMEM) + 5% Fetal Bovine Serum (FBS) + 1% penicillin-streptomycin at 37 degrees Celsius for 6 hours. Explants were cultured on a glass-bottom petri dish and imaged every hour on a Zeiss LSM 880 point-scanning confocal microscope. Volumetric images taken through the z-axis were acquired at 40x and 63x. Images in the figure are compressed z-stacks within a selected range, but the raw image files in .czi format are also included.
DOI: 10.17632/84nnvcr8x5
title: Focal Mechanism Solutions Dataset of Local Earthquakes (1951-2020) in Egypt

description: This file incorporates the final gathered and analyzed focal mechanisms for local earthquakes that present moment magnitudes equal to or greater than 3.0, and occurred from 1951 to 2020, in Egypt. The current dataset comprises a total number of 462 focal mechanism solutions covering the spatial region from 21° to 34°N latitudes and from 24° to 38°E longitudes. Reported parameters for each included earthquake in this dataset are the origin time (year-month-date) and date (hour-minute-second), coordinates in terms of longitude and latitude, depth and magnitude values, faulting parameters for the two nodal planes in terms of the strike, dip and rake angles, azimuth and plunge of the principal strain axes (P-,T-, and B-axes), as well as the faulting type (Normal “NF”, Normal with strike-slip component “NS”, Strike-slip “SS”, Reverse “TF”, Reverse with strike-slip component “TS”, or Undefined “U” faulting).
DOI: 10.6084/m9.figshare.14204651.v1
title: Supplemental Table S5

description: This data table shows the statistical output for a 2-way ANOVA using Metaboanalyst for both <sup>1</sup>H-NMR spectroscopy and LC-MS/MS data from the study.
DOI: 10.6084/m9.figshare.28941413.v1
title: 第三组键盘

description: data
DOI: 10.17632/k4gvsjv4t3
title: Data for: Improved Weed Segmentation in UAV Imagery of Sorghum Fields with a Combined Deblurring Segmentation Model

description: In this study we propose a new deep-learning based combined deblurring and segmentation model called "DeBlurWeedSeg" to detect weeds in sharp as well as in motion blurred drone images. Therefore we generated a manually annotated and expert curated drone image dataset for weed detection in sorghum fields consisting of image-pairs with and without motion blur. The UAV captures were generated at an experimental agricultural sorghum field in Southern Germany using a ”DJI Mavic 2 Pro” consumer-grade drone where sorghum was at BBCH 13. We observed Chenopodium album L. as the main weed species present with low quantities of Cirsium arvense L. (Scop.). 

The data.zip directory consists of 3 subfolders: "gt" consists of 1300 pairs of 128x128 px² image patches of motion blurred and sharp drone images and their corresponding ground-truth. This is the complete dataset used in this study. In the subfolder "splits", we provide the dataset split files as csv for training, validation and testing our models. For an in-depth comparison of our "DeBlurWeedSeg" model we generated a new ground-truth for the deblurring part of the model and publish them in the subfolder "gt_testset". 

The proposed model "DeBlurWeedSeg" is trained using pytorch and saved under model.zip. Please refer to the Github repository for further information on how to load this model and usage of the data.

Github link: https://github.com/grimmlab/DeBlurWeedSeg
DOI: 10.6084/m9.figshare.24313807.v3
title: Datasets for CO2 DA paper

description: A repository for the xyz, energy, HOMO and LUMO energy of functionalized dienes/tetrazines.
DOI: 10.6084/m9.figshare.24886620.v2
title: Data for: Carnivore community reassembly provides a test of Eltonian niche conservatism

description: Museum, collared animals, AFA, and MDNR-provided samples ranging from the early 1900s to early 2000s of hair and bone for SIA.
DOI: 10.17632/xhxbf5hyyt
title: Genomic data for: Genome-wide ultraconserved elements resolve phylogenetic relationships and biogeographic history among Neotropical leaf-nosed bats in the genus Anoura (Phyllostomidae).

description: This repository contains :

1. Supplementary Material
2. Aligned UCE sequences

Used in the following publications: 

· Calderón-Acevedo, C. A., Bagley J. C., & Muchhala, N. (2021). Genome-wide ultraconserved elements resolve phylogenetic relationships and biogeographic history among Neotropical leaf-nosed bats in the genus Anoura (Phyllostomidae). Molecular Phylogenetics and Evolution. https://doi.org/10.1016/j.ympev.2021.107356

· Calderón-Acevedo, C. A., Rodríguez-Posada, M. E., & Muchhala, N. (2021). Morphology and genetics concur that Anoura carishina is a synonym of Anoura latidens (Chiroptera, Glossophaginae). Mammalia, 85(5):471–481. https://doi.org/10.1515/mammalia-2020-0183
DOI: 10.6084/m9.figshare.28082684.v1
title: Geographical Distribution and Prevalence of <i>Borrelia </i>Genotypes in Eurasian Ticks

description: We present a comprehensive dataset on the prevalence of <i>Borrelia burgdorferi (</i><i>B. burgdorferi)</i> prevalence in ticks across Eurasia, comprising 1971 records from 581 publications from 2000 to 2023. The dataset provides detailed metadata, including tick species, life stages, collection methodologies, and geographical coordinates across various administrative levels.
DOI: 10.17632/89fwj6yb8z
title: household profiles

description: electrical and thermal consumption profile, PV generation profile, and EV driving profile in 10-minute time resolution for 20 average households in Munich, Germany Consumption and EV driving profile are output of FfE household load generator [1]. PV generation profile is based on solar data [2] [1] Müller, M.; Biedenbach, F.; Reinhard, J. Development of an Integrated Simulation Model for Load and Mobility Profiles of Private Households. Energies 2020, 13, 3843. [2] Schroedter‐Homscheidt, Marion et al.: User’s Guide to the CAMS Radiation Service - Status December 2016. Shinfield Park: ECMWF, 2016.