cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.2jcseg
title: Occurrence Download

description: A dataset containing 67671 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lepidoptera"
 ]
}

 The dataset includes 67671 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115338-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3hk1n8
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hyla bogertae Straughan & Wright, 1969"
 ]
}

 The dataset includes 17 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011386-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.frzw34
title: Occurrence Download

description: A dataset containing 1098 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Base de datos y catálogo de helmintos parásitos de anuros de México"
 ]
}

 The dataset includes 1098 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0058737-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lrewnp
title: Occurrence Download

description: A dataset containing 14591 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Collection Coleoptera SMF"
 ]
}

 The dataset includes 14591 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013637-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2ky6pl
title: Occurrence Download

description: A dataset containing 8406 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Conservatoire Botanique Pierre Fabre"
 ]
}

 The dataset includes 8406 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022906-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bdcky6
title: Occurrence Download

description: A dataset containing 348 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anthophora albata Cresson, 1876"
 ]
}

 The dataset includes 348 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011386-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.umkzh1
title: Occurrence Download

description: A dataset containing 54035 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Woodsia macrochlaena Mett. ex Kuhn, Stegnogramma sagittifolia (Ching) L.J.He & X.C.Zhang, Rhachidosorus consimilis Ching, Onoclea sensibilis L., Matteuccia struthiopteris (L.) Tod., Asplenium unilaterale Lam., Homalosorus pycnocarpos (Spreng.) Pic.Serm., Dryopteris decipiens (Hook.) Kuntze, Diplazium unilobum (Poir.) Hieron., Diplazium dilatatum Blume, Diplazium bellum (C.B.Clarke) Bir, Diplaziopsis javanica (Blume) C.Chr., Deparia lancea (Thunb.) Fraser-Jenk., Cystopteris chinensis (Ching) X.C.Zhang & R.Wei, Athyrium opacum (D.Don) Copel., Asplenium prolongatum Hook., Asplenium sarelii Hook., Anisocampium sheareri (Baker) Ching, Pecteilis radiata (Thunb.) Raf., Gastrochilus japonicus (Makino) Schltr., Oberonia japonica (Maxim.) Makino, Gastrochilus fuscopunctatus (Hayata) Hayata, Schizaea pectinata (L.) Sw., Schizaea elegans (Vahl) Sw., Cinnamomum micranthum (Hayata) Hayata, Hypodematium crenatum (Forssk.) Kuhn, Diplazium striatum (L.) C.Presl, Diplazium dushanense (Ching ex W.M.Chu & Z.R.He) R.Wei & X.C.Zhang, Diplaziopsis cavaleriana (Christ) C.Chr., Deparia viridifrons (Makino) M.Kato, Deparia pycnosora (Christ) M.Kato, Austroblechnum melanocaulon (Brack.) Gasper & V.A.O.Dittrich, Athyrium sinense Rupr., Phoebe sheareri (Hemsl.) Gamble, Persea americana Mill., Machilus balansae (Airy Shaw) F.N.Wei & S.C.Tang, Machilus yunnanensis Lecomte, Aconitum carmichaeli Debeaux, Aconitum austrokoreense Koidz., Chrysopogon zizanioides (L.) Roberty, Burmeistera auriculata Muchhala & Lammers, Burmeistera borjensis Jeppesen, Burmeistera ceratocarpa Zahlbr., Burmeistera crispiloba Zahlbr., Burmeistera cyclostigmata Donn.Sm., Burmeistera cylindrocarpa Zahlbr., Burmeistera domingensis Jeppesen, Burmeistera fuscoapicata E.Wimm., Burmeistera loejtnantii Jeppesen, Burmeistera lutosa E.Wimm.)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 54035 records from 514 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013637-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xoaqax
title: Occurrence Download

description: A dataset containing 21832 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Amazona viridigenalis (Cassin, 1853)"
 ]
}

 The dataset includes 21832 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011386-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zzyu9y
title: Occurrence Download

description: A dataset containing 36 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Allium henryi C.H.Wright"
 ]
}

 The dataset includes 36 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068849-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ypadce
title: Occurrence Download

description: A dataset containing 179 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Manettia mitis (Vell.) K.Schum."
 ]
}

 The dataset includes 179 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013637-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dzqc5r
title: Occurrence Download

description: A dataset containing 416 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Programme Cybelle Méditerranée - Cybelle Méditerranée. Observation nautique avec effort d'observation"
 ]
}

 The dataset includes 416 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022914-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mhfutl
title: Occurrence Download

description: A dataset containing 13543 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Atethmia centrago (Haworth, 1809)"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 13543 records from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011387-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hvq7vy
title: Occurrence Download

description: A dataset containing 142337 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-69.23035 47.45544,-66.25305 43.59924,-65.58289 43.37952,-59.4635 45.75256,-60.39734 47.13684,-62.80334 46.59851,-63.90198 47.05994,-64.25354 47.98279,-65.75867 47.98279,-66.17615 48.10364,-66.95618 48.05969,-67.95593 48.02673,-69.23035 47.45544))",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 142337 records from 123 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013638-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.czinrt
title: Occurrence Download

description: A dataset containing 104848 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Bubo scandiacus (Linnaeus, 1758)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 104848 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011387-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v5awjc
title: Occurrence Download

description: A dataset containing 62401 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Canadian Museum of Nature Fish Collection"
 ]
}

 The dataset includes 62401 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072570-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ubjsrw
title: Occurrence Download

description: A dataset containing 56 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Tetraglochin cristatum (Britton) Rothm.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 56 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013639-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rupfaw
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Argia tarascana Calvert, 1902"
 ]
}

 The dataset includes 18 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011390-180730143533302/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.l4p4ry
title: Occurrence Download

description: A dataset containing 162 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bauhinia vahlii Wight & Arn."
 ]
}

 The dataset includes 162 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046119-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eg5obx
title: Occurrence Download

description: A dataset containing 146 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "HasCoordinate is true",
 "TaxonKey is Sambucus nigra L.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 146 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013640-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2em3xf
title: Occurrence Download

description: A dataset containing 195 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Gentianella aspera (Hegetschw.) Dostál ex Skalický, Chrtek & Gill"
 ]
}

 The dataset includes 195 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0117031-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ktjam3
title: Occurrence Download

description: A dataset containing 1263 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Sweden",
 "TaxonKey is Vanellus gregarius (Pallas, 1771)"
 ]
}

 The dataset includes 1263 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011390-180824113759888/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jv7z7s
title: Occurrence Download

description: A dataset containing 1774 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Human Observation"
 ]
 },
 "Geometry POLYGON((-72.09129 7.11458,-68.74545 8.08338,-65.95892 8.0634,-60.37587 9.71135,-61.16488 9.93108,-71.4331 13.39021,-76.76547 10.34057,-72.09129 7.11458))",
 "HasCoordinate is true",
 "TaxonKey is Myiarchus tuberculifer (Orbigny & Lafresnaye, 1837)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1774 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013642-181108115102211/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ec6tn0
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Geometry POLYGON((-73.11234 5.03182,-73.11363 5.02058,-73.092 5.02084,-73.09174 5.03174,-73.11234 5.03182))",
 "TaxonKey is Chordata"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011390-181003121212138/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.as8rps
title: Occurrence Download

description: A dataset containing 5014 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Baronia brevicornis Salvin, 1893"
 ]
}

 The dataset includes 5014 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0115333-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.joejlo
title: Occurrence Download

description: A dataset containing 8462704 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Year 1799-2019",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 {
 "or" : [
 "TaxonKey is Asterales",
 "TaxonKey is Fabales",
 "TaxonKey is Lamiales",
 "TaxonKey is Malpighiales"
 ]
 },
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8462704 records from 806 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013642-190320150433242/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26722950
title: Additional file 2 of Deficiency of UCHL1 results in insufficient decidualization accompanied by impaired dNK modulation and eventually miscarriage

description: Supplementary material 2.
DOI: 10.6084/m9.figshare.26639043.v1
title: Additional file 3 of Establishment and characterization of a non-gestational choriocarcinoma patient-derived xenograft model

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.24516082.v1
title: Additional file 2 of MiR-181a targets STING to drive PARP inhibitor resistance in BRCA- mutated triple-negative breast cancer and ovarian cancer

description: Additional file 2: Table S1. Reagents and resources utilized in the study.
DOI: 10.15468/dl.gcnsne
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON (((148.868069 -34.352273, 148.868069 -34.361257, 148.872561 -34.361257, 148.872561 -34.359011, 148.874807 -34.359011, 148.874807 -34.354519, 148.872561 -34.354519, 148.872561 -34.352273, 148.868069 -34.352273)), ((148.872561 -34.361257, 148.872561 -34.37024, 148.868069 -34.37024, 148.868069 -34.374731, 148.872561 -34.374731, 148.872561 -34.376977, 148.879298 -34.376977, 148.879298 -34.374731, 148.88379 -34.374731, 148.88379 -34.37024, 148.879298 -34.37024, 148.879298 -34.361257, 148.872561 -34.361257)))"
 ]
}

 The dataset includes 17 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071052-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26636517
title: Additional file 1 of The diagnostic performance of AFP and PIVKA-II models for non-B non-C hepatocellular carcinoma

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26636424.v1
title: Additional file 7 of Alterations to DNA methylation patterns induced by chemotherapy treatment are associated with negative impacts on the olfactory pathway

description: Additional file 7. Characteristics of 2,145 breast cancer patients in the Singapore Breast Cancer Cohort (single time point analysis). P-values are from the Chi-square test and Wilcoxon test for categorical and continuous variables, respectively. We excluded unknown values when performing the tests.
DOI: 10.6084/m9.figshare.26636445.v1
title: Additional file 14 of Alterations to DNA methylation patterns induced by chemotherapy treatment are associated with negative impacts on the olfactory pathway

description: Additional file 14. Gene set enrichment analysis of KEGG pathways using results from unadjusted and adjusted models, by specimen type (blood or saliva).
DOI: 10.6084/m9.figshare.26636454.v1
title: Additional file 17 of Alterations to DNA methylation patterns induced by chemotherapy treatment are associated with negative impacts on the olfactory pathway

description: Additional file 17. Characteristics of the 7,177 source cohort's (the Singapore Breast Cancer Cohort) patients with blood or saliva samples and clinical data. Comparison to the 2,145 selected patients in this study was done using the Chi-square test for categorical variables and the Kruskal Wallis test for the continuous variables, unknown values were excluded from the test.
DOI: 10.6084/m9.figshare.26636301.v1
title: Additional file 1 of Isthmin-1 attenuates allergic Asthma by stimulating adiponectin expression and alveolar macrophage efferocytosis in mice

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26636418
title: Additional file 5 of Alterations to DNA methylation patterns induced by chemotherapy treatment are associated with negative impacts on the olfactory pathway

description: Additional file 5. Gene set enrichment analysis of Gene Ontology (GO) biological processes from results of unadjusted and adjusted models in paired pre- and post-chemotherapy samples of 125 breast cancer patients who received chemotherapy.
DOI: 10.6084/m9.figshare.26636418.v1
title: Additional file 5 of Alterations to DNA methylation patterns induced by chemotherapy treatment are associated with negative impacts on the olfactory pathway

description: Additional file 5. Gene set enrichment analysis of Gene Ontology (GO) biological processes from results of unadjusted and adjusted models in paired pre- and post-chemotherapy samples of 125 breast cancer patients who received chemotherapy.
DOI: 10.6084/m9.figshare.26636421.v1
title: Additional file 6 of Alterations to DNA methylation patterns induced by chemotherapy treatment are associated with negative impacts on the olfactory pathway

description: Additional file 6. Gene set enrichment analysis of KEGG pathways from results of unadjusted and adjusted models in paired pre- and post-chemotherapy samples of 125 breast cancer patients who received chemotherapy.
DOI: 10.5281/zenodo.13323399
title: Results for datasets with simulated error (derived from Datasets 1-5)

description: Datasets w/ simulated error derived from Datasets 1-5.

Version 2: Datasets were calculated with an Rstandard (R_std) value of 0.0036765 (Skrzypek, G. and Dunn, P. J. H., Rapid Commun. Mass Spectrom., 34, e8890, https://doi.org/10.1002/rcm.8890, 2020), which is more accurate than the atom percent value used in Version 1. Updating the R_std value had essentially no effect on the average values calculated using these datasets.

There are 1000 datasets per combination of error level and skewness type.



e1: Low error, no skew

e2: Medium error, no skew

e3: High error, no skew

e4: Low error, left skew

e5: Medium error, left skew

e6: High error, left skew

e7: Low error, right skew

e8: Medium error, right skew

e9: High error, right skew
DOI: 10.5281/zenodo.10888930
title: Results for datasets with simulated error (derived from Datasets 1-5)

description: Datasets w/ simulated error derived from Datasets 1-5.

Version 2: Datasets were calculated with an Rstandard (R_std) value of 0.0036765 (Skrzypek, G. and Dunn, P. J. H., Rapid Commun. Mass Spectrom., 34, e8890, https://doi.org/10.1002/rcm.8890, 2020), which is more accurate than the atom percent value used in Version 1. Updating the R_std value had essentially no effect on the average values calculated using these datasets.

There are 1000 datasets per combination of error level and skewness type.



e1: Low error, no skew

e2: Medium error, no skew

e3: High error, no skew

e4: Low error, left skew

e5: Medium error, left skew

e6: High error, left skew

e7: Low error, right skew

e8: Medium error, right skew

e9: High error, right skew
DOI: 10.5281/zenodo.10888931
title: Results for datasets with simulated error (derived from Datasets 1-5)

description: Datasets w/ simulated error derived from Datasets 1-5. There are 1000 datasets per combination of error level and skewness type.



e1: Low error, no skew

e2: Medium error, no skew

e3: High error, no skew

e4: Low error, left skew

e5: Medium error, left skew

e6: High error, left skew

e7: Low error, right skew

e8: Medium error, right skew

e9: High error, right skew
DOI: 10.6084/m9.figshare.26636430
title: Additional file 9 of Alterations to DNA methylation patterns induced by chemotherapy treatment are associated with negative impacts on the olfactory pathway

description: Additional file 9. Association between chemotherapy and DNA methylation in 525,100 CpG probes in 1,808 breast cancer patients with blood specimens (1,066 with chemotherapy and 742 without chemotherapy). Presented here are associations that reached statistical significance at a Bonferroni threshold p-value (p&lt;9.52e-8) in either unadjusted analysis or after adjustments for batch, immune cell content (LUMP), cell types, year of breast cancer diagnosis, and ethnicity. Standard error = stdev.unscaled * s2.post.
DOI: 10.6084/m9.figshare.26636439
title: Additional file 12 of Alterations to DNA methylation patterns induced by chemotherapy treatment are associated with negative impacts on the olfactory pathway

description: Additional file 12. Association between chemotherapy and DNA methylation in 40,271 promoter regions in 337 breast cancer patients with saliva specimens (207 treated and 130 not treated with chemotherapy). Presented here are associations that reached statistical significance at a Bonferroni threshold p-value (p&lt;1.24e-6) in either unadjusted analysis or after adjustments for batch, immune cell content (LUMP), year of breast cancer diagnosis, and ethnicity. Standard error = stdev.unscaled * s2.post.