cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6603301
title: Dataset on concentrations of CECs / PMTs /vPvM chemicals in Northern Portugal - Galicia (NW Spain) surface waters and wastewaters

description: Dataset of concentrations of different contaminants of emerging concern (CECs), including persistent mobile and toxic (PMT) and very persistent and very mobile (vPvM) chemicals, in raw and treated wastewater, inland and coastal water samples from Galicia (NW Spain) and the North of Portugal. Data is provided in MS Excel (xlsx) and CSV formats and contains chemicals data, concentrations, location of the samples (coordinates) and sampling date. Location of the wastewater samples is not provided ought to confidentiality agreement. Further details are provided in the associated publication: <strong><em>R. Montes et al. Occurrence of persistent and mobile chemicals and other contaminants of emerging concern in Spanish and Portuguese wastewater treatment plants, transnational river basins and coastal water. Science of the Total Environment 2023, 885, 163737. DOI: </em>10.1016/j.scitotenv.2023.163737</strong> <strong>If you use this data, please cite this ZENODO deposit (DOI: 10.5281/zenodo.6603302) and the associated publication mentioned above (DOI: 10.1016/j.scitotenv.2023.163737)</strong>
description: This work was financed by: - European Regional Development Fund through the Interreg V-A Spain-Portugal Programme (POCTEP) 2014-2020 (ref. 0725_NOR_WATER_1_P) - Agencia Estatal de Investigación MCIN/AEI/10.13039/501100011033 (ref. PID2020-117686RB-C32) - Consellería de Cultura, Educación y Universidades da Xunta de Galicia (ref. ED431C 2021/06) - Portuguese Foundation for Science and Technology (FCT) under the projects [UIDB/04423/2020 and UIDP/04423/2020; Ph.D. grant DFA/BD/6218/2020 - Nelson Alves; 2022.02925.CEECIND - Teresa Neuparth] - Banco Santander and Universidade de Santiago de Compostela (Rosa Montes outstanding researcher contract)
DOI: 10.5281/zenodo.6603302
title: Dataset on concentrations of CECs / PMTs /vPvM chemicals in Northern Portugal - Galicia (NW Spain) surface waters and wastewaters

description: Dataset of concentrations of different contaminants of emerging concern (CECs), including persistent mobile and toxic (PMT) and very persistent and very mobile (vPvM) chemicals, in raw and treated wastewater, inland and coastal water samples from Galicia (NW Spain) and the North of Portugal. Data is provided in MS Excel (xlsx) and CSV formats and contains chemicals data, concentrations, location of the samples (coordinates) and sampling date. Location of the wastewater samples is not provided ought to confidentiality agreement. Further details are provided in the associated publication: <strong><em>R. Montes et al. Occurrence of persistent and mobile chemicals and other contaminants of emerging concern in Spanish and Portuguese wastewater treatment plants, transnational river basins and coastal water. Science of the Total Environment 2023, 885, 163737. DOI: </em>10.1016/j.scitotenv.2023.163737</strong> <strong>If you use this data, please cite this ZENODO deposit (DOI: 10.5281/zenodo.6603302) and the associated publication mentioned above (DOI: 10.1016/j.scitotenv.2023.163737)</strong>
description: This work was financed by: - European Regional Development Fund through the Interreg V-A Spain-Portugal Programme (POCTEP) 2014-2020 (ref. 0725_NOR_WATER_1_P) - Agencia Estatal de Investigación MCIN/AEI/10.13039/501100011033 (ref. PID2020-117686RB-C32) - Consellería de Cultura, Educación y Universidades da Xunta de Galicia (ref. ED431C 2021/06) - Portuguese Foundation for Science and Technology (FCT) under the projects [UIDB/04423/2020 and UIDP/04423/2020; Ph.D. grant DFA/BD/6218/2020 - Nelson Alves; 2022.02925.CEECIND - Teresa Neuparth] - Banco Santander and Universidade de Santiago de Compostela (Rosa Montes outstanding researcher contract)
DOI: 10.17632/p4jxmd4gd7.1
title: Agricultural_land_consolidation

description: This repository contains benchmark datasets for two problems: the Bin Packing Problem with Relaxed Capacity Constraint (BPP) and the Soft-Rectangle Packing Problem with Guillotine Constraint (SRPP). These problems are part of a two-stage decomposition approach used in Agricultural Land Consolidation in Vietnam
DOI: 10.17632/sw5dgpb9zf.1
title: Background risk during development and early life does not affect later activity and risk-taking across genetically distinct lineages of the mangrove rivulus

description: Detecting and reacting appropriately to predation risk is crucial. Early exposure to cues associated with a high-risk environment can signal the background predation risk and if these cues alter development, they might give individuals a head-start in preparing for a dangerous environment later on. Here we examined how early cues of predation risk (i.e. embryo alarm cues) experienced either as embryos or as newly hatched fry affect response to a novel environment and a stressful disturbance in the self-fertilizing hermaphroditic mangrove rivulus (Kryptolebias marmoratus). Due to many generations of selfing, mangrove rivulus produce genetically identical offspring resulting in distinct genetic lineages, thus we could also examine whether genotypes vary in their developmental plasticity in response to risk. Although all individuals decreased their activity and risk-taking in response to a stressful disturbance, we found that early exposure to alarm cues, whether as an embryo or early hatched fry, did not affect this response. Furthermore, genotypes did not differ in their sensitivity to the early risk cues, although genetic lineages differed in their average behavior. Our results suggest that mangrove rivulus do not use early background risk to shape their behavior later on and that this insensitivity is consistent across distinct genetic lineages. It is possible that alarm cues experienced as embryos and/or young fry are not informative of future predation risk in the dynamic mangrove swamps in which these fish reside and thus are not used to shape future responses.
DOI: 10.17632/85w2vtk9z5.1
title: SUPPLEMENTAL INFORMATION - Association of infantile antibiotic exposure and its changes with pediatric alopecia areata: A nationwide cohort study

description: Mendeley supplemental Table I. Hazard ratios for alopecia totalis, alopecia universalis, and patch-type alopecia areata according to the number of antibiotic classes, cumulative days of antibiotic exposure, and age at the time of the first prescription in infants and children
Mendeley supplemental Table II. Hazard ratios for alopecia areata according to the specific antibiotic classes compared to antibiotic non-user in infants and children
Mendeley supplemental Table III. Subgroup analyses of the association of antibiotics use with alopecia areata among infants and children
DOI: 10.17632/v48tz84f8x.1
title:  Survey format and Raw Data, vertebrate fauna conservation strategies

description: add file 1. the paper: Perception and attitudes of local communities towards vertebrate fauna in the Andes of Colombia: Effects of gender and the urban/rural setting
DOI: 10.17632/v48tz84f8x.2
title:  Survey format and Raw Data, vertebrate fauna conservation strategies

description: add file 1. the paper: Perception and attitudes of local communities towards vertebrate fauna in the Andes of Colombia: Effects of gender and the urban/rural setting
DOI: 10.17632/m8nzsk5c9v.1
title: Reproducibility dataset for a new mixed-integer programming model for irregular strip packing based on vertical slices

description: This dataset introduces a detailed reproducibility protocol to allow the exact replication of the experiments on Mixed-Integer Programming (MIP) model for irregular strip packing reported in our primary work. Likewise, this dataset provides all raw output data from our experiments used in our primary work. Our reproducibility protocol is based on our RAMNEST V1R1 Java software library of MIP models for irregular strip packing. Our software library implements our new family of NFP-CM-VS MIP models for irregular strip packing and the family of state-of-the-art NFP-CM models introduced by Cherri et al. (2016) and Rodrigues et al. (2017). We evaluate six MIP models in 35 small problem instances and 11 large ones, as detailed in the experimental setup of our work. All MIP models are implemented in our Java software library and solved using the Java API of Gurobi 9.5 with its default parameters. Thus, the use of our software requires the installation of an academic or commercial license of Gurobi 9.5 for UBUNTU. This dataset includes the Java source code and pre-compiled binaries of our software library developed with Netbeans 8.2 for UBUNTU.
DOI: 10.17632/m8nzsk5c9v.2
title: Reproducibility dataset for a new family of mixed-integer programming model for irregular strip packing based on vertical slices

description: This dataset introduces a detailed reproducibility protocol to allow the exact replication of the experiments on Mixed-Integer Programming (MIP) model for irregular strip packing reported in our primary work. Likewise, this dataset provides all raw output data from our experiments used in our primary work. Our reproducibility protocol is based on our RAMNEST V1R2 Java software library of MIP models for irregular strip packing. Our software library implements our new family of NFP-CM-VS MIP models for irregular strip packing and the family of state-of-the-art NFP-CM models introduced by Cherri et al. (2016) and Rodrigues et al. (2017). We evaluate all MIP models in 35 small problem instances, 24 metal instances including pieces with holes, and 11 large problem instances, as detailed in the experimental setup of our work. All MIP models are implemented in our Java software library and solved using the Java API of Gurobi 9.5 with its default parameters. Thus, the use of our software requires the installation of an academic or commercial license of Gurobi 9.5 for UBUNTU. This dataset includes the Java source code and pre-compiled binaries of our software library developed with Netbeans 8.2 for UBUNTU. We also provide all MIP models in LP file format, which allows reproducing our experiments without our software by loading them into Gurobi, or any other MIP solver as CPLEX.
DOI: 10.17632/8jrbnmfc7s.1
title: Knowledge, attitude and practice towards work related musculoskeletal disorders among dentists in Haryana

description: Work-related musculoskeletal disorders (WMSDs) are a common health problem that affects a large number of workers, including dentists. Dentists are at an increased risk of developing WMSDs due to the nature of their job, which involves repetitive hand movements and prolonged static postures. To assess the knowledge, attitude, and practice towards work-related musculoskeletal disorders among dentists in Haryana, with the aim of developing effective preventive strategies and interventions. Study participants included a total of 282 dentists from Haryana. From August 2022 until May 2023, a 7-month study was conducted. A questionnaire was created in the initial phase to gauge the attitude of the doctors towards musculoskeletal problems related to the workplace. The questionnaire's questions were verified. In the second round, dentists who met the inclusion criteria were given the questionnaire via online Google forms. The study found that although dentists had a good level of knowledge regarding WMSDs, their attitude and practice towards prevention and management of WMSDs were inadequate. The findings of the study can be used to develop effective preventive strategies and interventions to reduce the incidence of WMSDs among dentists in Haryana.
DOI: 10.17632/7fmd2nv7cv.1
title: Supplementary material for "Performance of an adiabatic pre-cooling system for concentrating solar power plants in arid areas"

description: This repository contains supplementary material referenced in the publication "Performance of an adiabatic pre-cooling system for concentrating solar power plants in arid areas". 

The quoted publication, published as pre-proof at the time of writing this Mendeley dataset, is cited as:
L.G. Redelinghuys, M.C. Tshamala, T.M. Hans,
Performance of an adiabatic pre-cooling system for concentrating solar power plants in arid areas,
Applied Thermal Engineering,
2023,
120819,
ISSN 1359-4311,
https://doi.org/10.1016/j.applthermaleng.2023.120819.
DOI: 10.17632/7fmd2nv7cv.2
title: Supplementary material for "Performance of an adiabatic pre-cooling system for concentrating solar power plants in arid areas"

description: This repository contains supplementary material referenced in the publication "Performance of an adiabatic pre-cooling system for concentrating solar power plants in arid areas". 

The quoted publication, published as pre-proof at the time of writing this Mendeley dataset, is cited as:
L.G. Redelinghuys, M.C. Tshamala, T.M. Hans,
Performance of an adiabatic pre-cooling system for concentrating solar power plants in arid areas,
Applied Thermal Engineering,
2023,
120819,
ISSN 1359-4311,
https://doi.org/10.1016/j.applthermaleng.2023.120819.
DOI: 10.17632/8thx7shzs2.1
title: Irregular particle motion simulator-3D (IPMS-3D)

description: Irregular Particle Motion Simulator-3D (IPMS-3D), a concrete simulation package developed by a group of researchers in the department of civil engineering at IIT Kharagpur. Tests 1.Hardened concrete simulations Tensile test, Compression test, Bending test, shear test, Abrasion test, 2.Fresh concrete simulations Slump test, Flowability test, Shear test 3.Fabric study Developers Prof. Arghya Deb (Head) Ramakrishna Dandapat Subha Ghosh Kumar Anjneya Subham Mukherji
DOI: 10.17632/z4gxnhchky.5
title: Supporting documentation for time-dependent concrete material models in OpenSees

description: This dataset contains supporting documentation explaining the use of time-dependent concrete material models TDConcrete, TDConcreteEXP, TDConcreteMC, and TDConcreteMC10NL in OpenSees.
The dataset contains a manual explaining the use and features of the models, an Excel table for calculating model input parameters and example files using the material model TDConcreteMC10NL on a specific example.
DOI: 10.17632/z4gxnhchky.3
title: Supporting documentation for time-dependent concrete material models in OpenSees

description: This dataset contains supporting documentation explaining the use of time-dependent concrete material models TDConcrete, TDConcreteEXP, TDConcreteMC, and TDConcreteMC10NL in OpenSees. The dataset contains a manual explaining the use and features of the models, an Excel table for calculating model input parameters and example files using the material model TDConcreteMC10NL on a specific example.
DOI: 10.17632/z4gxnhchky.4
title: Supporting documentation for time-dependent concrete material models in OpenSees

description: This dataset contains supporting documentation explaining the use of time-dependent concrete material models TDConcrete, TDConcreteEXP, TDConcreteMC, and TDConcreteMC10NL in OpenSees. The dataset contains a manual explaining the use and features of the models, an Excel table for calculating model input parameters and example files using the material model TDConcreteMC10NL on a specific example.
DOI: 10.17632/z4gxnhchky.6
title: Supporting documentation for time-dependent concrete material models in OpenSees

description: This dataset contains supporting documentation explaining the use of time-dependent concrete material models TDConcrete, TDConcreteEXP, TDConcreteMC, and TDConcreteMC10NL in OpenSees.
The dataset contains a manual explaining the use and features of the models, an Excel table for calculating model input parameters and example files using the material model TDConcreteMC10NL on a specific example.
DOI: 10.17632/2bf8vmrgw8.1
title: Sulfur geochemistry of the Salitre Formation phosphorites

description: Comma-delimited version of table containing measured δ34S of CAS, PAS, CRS, and pyrite in phosphatic and non-phosphatic microfacies of the Salitre Formation.

Sample ID includes abbreviation for stratigraphic column and locality, as well as numbers indicating stratigraphic height and lateral distance in a measured section (both in meters) from a datum for the given column, or depth in a drill core (in cm) from the top of the core. Powders collected from the same hand samples (within centimeters of each other) are indicated with lowercase letters a-c. Note: Aris = Aristeia, Min = Minotaur, Cer = Cerberus, FuroV = CBPM Core 5, and FuroX = CBPM Core 10. 

Locality/Section names, stratigraphic columns, and geographic location are provided in Sanders and Grotzinger (2021), Sanders et al. (2023), and Sanders et al. (submitted).

Microfacies A = carbonate-cemented grainstone, B = carbonate-cemented grainstone adjacent to phospatic digitate stromatolite buildup, C = carbonate-cemented grainy inter-stromatolite fill, D = carbonate-cemented laminated mudstone, E = carbonate-cemented stromatolite laminae, and F = CFA-cemented stromatolite laminae. 

CAS = trace structural sulfate in the lattice of the indicated carbonate mineral(s), collected via protocols for trace sulfate extraction and purification, and measured via ICP-MS. PAS = trace structural sulfate in the lattice of the indicated phosphate mineral, collected via protocols for bulk phosphate-associated sulfate extraction, and measured via EA-IRMS. CRS = chromium-reducible sulfur, extracted and fixed as Ag2S from acid-insoluble residues, representative of sulfur in the lattice of pyrite measured via EA-IRMS. “Pyrite” and “pyrite/marcasite/pyrrhotite” refer to SIMS measurement of structural sulfur in individual crystals or aggregates of crystals.  

‰ is expressed with respect to Vienna Canyon Diablo Troilite (VCDT). 

Works Cited: 

1. Sanders C. B., Eiler J. C. and Grotzinger J. P. (2023) Paragenesis of an Ediacaran carbonate-platform phosphorite: Constraints from optical petrography and texture-specific clumped isotope paleothermometry. Sediment. Geol. 444, 106316. Available at: https://doi.org/10.1016/j.sedgeo.2022.106316.

2. Sanders C. and Grotzinger J. (2021) Sedimentological and stratigraphic constraints on depositional environment for Ediacaran carbonate rocks of the São Francisco Craton: Implications for phosphogenesis and paleoecology. Precambrian Res. 363, 106328. Available at: https://doi.org/10.1016/j.precamres.2021.106328.

3. Sanders C., Present T., Marroquin S. and Grotzinger J. (submitted) Sulfur geochemistry of the Salitre Formation phosphorites: Implications for the role of microbial ecology, sulfur cycling in phosphogenesis on an Ediacaran carbonate platform. Geochim. et Cosmochim. Acta.
DOI: 10.17632/f8r9vhpz59.2
title: Sleep Restriction, Mental Fatigue and Performance - Dataset

description: Data from "Mental fatigue and sleep restriction effects on perceptual-cognitive and physical performance in trained beach volleyball athletes".
DOI: 10.17632/f8r9vhpz59.3
title: Sleep Restriction, Mental Fatigue and Performance - Dataset

description: Data from "Mental fatigue and sleep restriction effects on perceptual-cognitive and physical performance in trained beach volleyball athletes".
DOI: 10.17632/f8r9vhpz59.1
title: Sleep Restriction, Mental Fatigue and Performance - Dataset

description: Data from "Mental fatigue and sleep restriction effects on perceptual-cognitive and physical performance in trained beach volleyball athletes".
DOI: 10.17632/7sfm62vrt6.1
title: Figures 2-4 for the paper “Analytical solution of l-i SEIR epidemic model”

description: Calculation of model variables and simulations of daily new COVID-19 cases based on the analytical solution of l-i SEIR epidemic model in Excel
DOI: 10.17632/7sfm62vrt6.2
title: Figures 2-4 for the paper “Analytical solution of l-i SEIR epidemic model”

description: Calculation of model variables and simulations of daily new COVID-19 cases based on the analytical solution of l-i SEIR epidemic model in Excel
DOI: 10.17632/fxy5khmhpb.1
title: Road Traversing Knowledge for Surface Classification

description: This dataset consists of 62.662 labeled images from Brazil's inner country roads captured by a low-cost camera (HP Webcam HD-4110) attached to a moving vehicle. The dataset presents three surface kinds: asphalt, paved and unpaved. There are 43.263, 13.697, and 5.702 images for asphalt, paved, and unpaved classes,  respectively.

All images were collected during the daytime in good weather conditions. The frames present lighting variations, shadows, and a few frames with solar glare. Moreover,  it is also noticed intra-class variations, such as asphalt surfaces with different color intensities, e.g., older asphalts are usually lighter than the new ones; paved surfaces formed by different patterns, e.g., cobblestone and concrete; and unpaved surfaces, which are naturally uneven.

The directory is organized by subdirectories with the class name, i.e., the surface kind.
DOI: 10.17632/57j37g6kdh.1
title: High-resolution photocatalytic mapping of SARS-CoV-2 spike interactions on the cell surface. Datta et al

description: Identifying virus-host interactions on the cell surface can improve our understanding of viral entry and pathogenesis. SARS-CoV-2, the causative agent of the COVID-19 disease, uses ACE2 as a receptor to enter cells. Yet the full repertoire of cell surface proteins that contribute to viral entry is unknown. We developed a photocatalyst-based viral-host protein microenvironment mapping platform (ViraMap) to probe the molecular neighborhood of the SARS-CoV-2 spike protein on the human cell surface. Application of ViraMap to ACE2-expressing cells captured ACE2, the established co-receptor NRP1, and several novel cell surface proteins. We systematically analyzed the relevance of these candidate proteins to SARS-CoV-2 entry by knockdown and overexpression approaches in pseudovirus and authentic infection models and identified PTGFRN and EFNB1 as bona fide viral entry factors. Our results highlight additional host targets that participate in SARS-CoV-2 infection and showcase ViraMap as a powerful platform for defining viral interactions on the cell surface.
DOI: 10.17632/zfv39hddv2.1
title: Case report: squamous cell carcinoma of the prostate-a clinicopathological and genomic sequencing-based investigation

description: Squamous differentiation of prostate cancer, which accounts for less than 1% of all cases, is typically associated with androgen deprivation treatment (ADT) or radiotherapy. This entity is aggressive and exhibits poor prognosis due to limited response to traditional treatment. However, the underlying molecular mechanisms and etiology are not fully understood. Previous findings suggest that squamous cell differentiation may potentially evolve from prostate adenocarcinoma (AC), as four cases of squamous cell carcinoma (SCC) of the prostate were detected with ERG pathway activation, but further validation is needed to confirm this hypothesis. This paper presents a case of advanced prostate cancer with a combined histologic pattern, including keratinizing SCC and AC. The study utilized whole-exome sequencing (WES) data to analyze both subtypes and identified significant genetic overlap between the two, despite having a non-ERG activation molecular signature. This discovery supports previous research that suggests squamous differentiation develops from prostate adenocarcinoma. Moreover, the transformation to squamous cell carcinoma in the prostate may involve various molecular pathways such as the reactivation of the AR pathway, genome instability, and abnormal R-loop formation. This indicates the need for individualized clinical management of prostate SCC, and specific molecular findings may aid in optimizing treatment strategies.