cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2pf0jp
title: CCDC 2485162: Experimental Crystal Structure Determination

description: Related Article: Shuaiqiang Zhao, Yating Wen, Zhiqiang Yang, Hanbing He, Haichao Liu, Bing Yang|2025|J.Am.Chem.Soc.|||doi:10.1021/jacs.5c16207
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2llkf6
title: CCDC 2401118: Experimental Crystal Structure Determination

description: Related Article: Hongyan Wu, Xiaoshuang Zhu, Bing Li, Yanhong Yang, Jiaxing He, Shoufeng Fu, Jiayan Guo, Chenghao Wang, Chenxi Yang, Jianlin Ren|2026|Inorg.Chim.Acta|590||doi:10.1016/j.ica.2025.122985
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2pl38p
title: CCDC 2490052: Experimental Crystal Structure Determination

description: Related Article: Xu-Rui Liu, Wen-Ping Xie, Hong Wang, Tong-Mei Ding, Yong-Qiang Tu, Zhi-Min Chen|2025|Org.Lett.|||doi:10.1021/acs.orglett.5c04252
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j85gg
title: CCDC 2331555: Experimental Crystal Structure Determination

description: Related Article: Rouzbeh Aghaei Hakkak|2025|CSD Communication|||
description: Related Article: Rouzbeh Aghaei Hakkak, Thomas M. Klapötke, Thomas Schleid|2024|Crystals|14|310|doi:10.3390/cryst14040310
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.krppka
title: Occurrence Download

description: A dataset containing 206 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "Geometry POLYGON((-115.55537 13.97164,-85.44463 13.97164,-85.44463 26.02836,-115.55537 26.02836,-115.55537 13.97164))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Sarcohyla bistincta",
 "Year 1965-2015"
 ]
}

 The dataset includes 206 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012657-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j6vg4h
title: Occurrence Download

description: A dataset containing 680 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Argentina",
 "TaxonKey is Latrodectus geometricus"
 ]
}

 The dataset includes 680 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012659-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v5bv3k
title: Occurrence Download

description: A dataset containing 101 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geophis anocularis"
 ]
}

 The dataset includes 101 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012662-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yavh4n
title: Occurrence Download

description: A dataset containing 31362 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Quercus agrifolia"
 ]
}

 The dataset includes 31362 records from 185 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012661-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g9wrkb
title: Occurrence Download

description: A dataset containing 45801 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingOrg is one of (a76f8527-23e8-4ba5-bdff-f9821bdac187, 0870a77b-587c-4369-a8ed-bc3d347b8e1c)",
 "DatasetKey is one of (The Fungal Collection at the Botanische Staatssammlung München, Luxembourg national monitoring (valerian) 2023-2025)"
 ]
 },
 "HasGeospatialIssue is false",
 "Geometry POLYGON((6.1496 50.19097,6.08368 50.20855,5.95184 50.20503,5.8255 50.12762,5.71564 49.97596,5.68268 49.86632,5.75409 49.75643,5.84747 49.64273,5.77057 49.55729,5.83099 49.49311,5.94635 49.43956,6.05621 49.42527,6.21002 49.4824,6.3913 49.43241,6.41327 49.51808,6.45721 49.60003,6.5506 49.6854,6.56158 49.81318,6.41327 49.86986,6.29242 49.91586,6.2265 49.98302,6.18256 50.05714,6.20453 50.14171,6.1496 50.19097))"
 ]
}

 The dataset includes 45801 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012663-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/5wwewh
title: Spider (Arachnida, Araneae) fauna of the lowland part of the Balkhash-Alakol basin (SE Kazakhstan). Part 2: IZRK collection data

description: The spider (Araneae) records from the lowland and foothill arid parts of the Balkhash-Alakol Basin.The territories of Almaty city and Talgar settlement (excluding their mountainous areas above 950 m a.s.l.) are also included, as they contain a significant number of records. The dataset contains original data recently collected by the staff of the Institute of Zoology of the Republic of Kazakhstan.The IZRK collection dataset includes 543 occurrences, collected and identified mainly during 2023–2025, with additional material from 2019–2022 also included. Almost all identifications were carried out primarily to the species level.
DOI: 10.15468/dl.ekcxxc
title: Occurrence Download

description: A dataset containing 6326 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Racinaea"
 ]
}

 The dataset includes 6326 records from 121 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012664-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5286/isis.e.rb2590280-1
title: Crystal field exciatations of NdTi3Bi4 low dimensional possible ferromagnet
DOI: 10.15468/dl.gnfbfu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "HasCoordinate is true",
 "Geometry POLYGON ((-118.5997 34.87462, -118.5999 34.8774, -118.6017 34.87761, -118.6049 34.878, -118.6046 34.87435, -118.6021 34.87394, -118.5997 34.87462))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012666-251120083545085/datasets/export for details.
DOI: 10.5281/zenodo.8426219
title: Bioresorbable fibers for interstitial null-separation diffuse optical spectroscopy using fast temporal gating

description: This dataset contains the rawdata, metadata, tools and the final results for the demonstration of interstitial spectroscopy with bioresorbable fibers at null distance, using time-domain diffuse optics that disentangles absorption from scattering properties and probes the tissues up to a depth of a few cm around the fiber tips. We exploit a fast-gated single-photon avalanche diode with 55 dB of dynamic range to overcome the burst of ‘early’ photons hiding the information of absorption from deep tissues. We tested the absorption linearity—retrieving the water spectrum in the 700–950 nm range with 85% accuracy over two decades of absorption change—and verified the hypothesis of a scattering-independent absorption retrieval. Further, we were able to detect spectral changes at a distance of 1 cm from an inclusion embedded in a biological tissue.
DOI: 10.5281/zenodo.8426218
title: Bioresorbable fibers for interstitial null-separation diffuse optical spectroscopy using fast temporal gating

description: This dataset contains the rawdata, metadata, tools and the final results for the demonstration of interstitial spectroscopy with bioresorbable fibers at null distance, using time-domain diffuse optics that disentangles absorption from scattering properties and probes the tissues up to a depth of a few cm around the fiber tips. We exploit a fast-gated single-photon avalanche diode with 55 dB of dynamic range to overcome the burst of ‘early’ photons hiding the information of absorption from deep tissues. We tested the absorption linearity—retrieving the water spectrum in the 700–950 nm range with 85% accuracy over two decades of absorption change—and verified the hypothesis of a scattering-independent absorption retrieval. Further, we were able to detect spectral changes at a distance of 1 cm from an inclusion embedded in a biological tissue.
DOI: 10.15468/dl.mnsw8j
title: Occurrence Download

description: A dataset containing 260 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Caracterización de Aves en el área de Farallones en la jurisdicción de CORPOGUAVIO"
 ]
}

 The dataset includes 260 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012670-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ekz8dr
title: Occurrence Download

description: A dataset containing 61 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geophis bicolor"
 ]
}

 The dataset includes 61 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012669-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17031/6928a6f66fefd
title: CPR Celtic copepods 2018-2022

description: CPR copepod abundance counts and Phytoplankton Colour within  12.5° W – 4.5° W; 48.5° N – 56° N from 2018-2022. NOTE: Only selected taxa have been included in this data extract, for specific taxa requirements please email claost@mba.ac.uk. The excel file consists of samples in rows, with the following information in columns - A: midpoint of sample local date and time B: midpoint of sample latitude in decimal degrees C: midpoint of sample longitude in decimal degrees D:chlorophyll index E:onwards = abundance counts per CPR sample ~3m3 of seawater. NaN = taxa was not looked for. The taxa_info sheet give more information on the taxa included; the counting method (1=eyecount, 2=traverse, 3=phytoplankton) and if the category is a grouping that includes other categories (to avoid double counting in your analyses). The Continuous Plankton Recorder (CPR) is a marine sampler that is towed behind volunteer ships of opportunity at speeds of up to ∼20 knots and samples at a depth of ∼7 m below the surface. The CPR unit is a metal casing in the shape of a ∼1 m torpedo that houses a roll of silk which automatically rotates using a geared propeller system. The seawater enters the front aperture where plankton and small particles are captured onto the rotating silk, which has a mesh size of 270 µm. This silk is stored in 4 % buffered formalin to preserve the sample until microscopic analysis at the laboratory in Plymouth. The silk is cut into pre-defined sections that represent one sample and equate to 10 nautical miles of tow. Phytoplankton and zooplankton are identified and counted at different stages of the microscopic analysis: semi-quantitative count of phytoplankton across 20 fields of view per sample, quantitative count of all zooplankton >= 2 mm (these are picked off the silk for identification), and semi-quantitative traverse count of all zooplankton 2 mm. For a more in-depth description of the sampling methodology please refer to Richardson et al. (2006). The Phytoplankton Colour Index is a record of the colour gradient of the mesh as one of 4 colour categories (0,1,2,6.5) and has been shown to relate to the chlorophyll content of the water, including organisms not visible in the sample (Raitsos et al., 2013, Raitsos, D.E., Walne, A., Lavender, S.J., Licandro, P., Reid, P.C., and Edwards, M. 2013. A 60-year ocean colour data set from the Continuous Plankton Recorder. Journal of Plankton Research, 35(1):
DOI: 10.34740/kaggle/dsv/13900245
title: Balochi Language to English Translation Dataset
DOI: 10.15468/dl.km6ync
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mammalia",
 "HasCoordinate is true",
 "Geometry POLYGON ((-115.8012 35.40948, -115.799 35.40924, -115.7986 35.41052, -115.8011 35.41078, -115.8012 35.40948))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012671-251120083545085/datasets/export for details.
DOI: 10.15468/dl.p5wqd7
title: Occurrence Download

description: A dataset containing 1744 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is ESP.12_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Athene noctua"
 ]
}

 The dataset includes 1744 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012672-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4uuwxy
title: Occurrence Download

description: A dataset containing 328 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "TaxonKey is Ralstonia solanacearum"
 ]
}

 The dataset includes 328 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012674-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5uqajb
title: Occurrence Download

description: A dataset containing 100 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Colombia, Brazil, Venezuela (Bolivarian Republic of), Ecuador, Peru)",
 "DatasetKey is one of (Xeno-canto - Bird sounds from around the world, Field Museum of Natural History (Zoology) Bird Collection)",
 "OccurrenceStatus is Present",
 "TaxonKey is Spizaetus ornatus"
 ]
}

 The dataset includes 100 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012673-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30519230
title: Protein tertiary structure is no better than poorly modelled amino acid sequences at resolving bilaterian relationships

description: The exponential increase in the availability of protein tertiary structures has re-ignited interest in their suitability for phylogenetic inference. Despite claims that this data type vastly outperforms primary sequences in resolving deep-time relationships, they have not held outside of paralog-rich protein family tree inference. Subsequent work on a standard, though taxon-poor, single-copy ortholog data set found that sequence-only data recovered considerably more uncontested metazoan relationships than the structure-only data. Here, we have extended these experiments to a taxon-rich data set, compared sequence-only, structure-only and combined data sets under model-based maximum likelihood tree inference, using supermatrix and supertree approaches. We also compared the performance of the model and distance-based structure-only tree inferences. We found that, even with minimal mitigation of sources of error, species trees inferred from sequence-only data were more similar to the canonical metazoan tree than all structure-aware trees, with conflicts between the canonical and inferred sequence trees explained by well-known cases of systematic error due to long-branch attraction (LBA). Within the structure-only analyses, which were just as prone to LBA, we found the neighbour-joining trees inferred from the 3Di-based Fident distance matrices to outperform the model-based analyses of 3Di “sequences”. Thus, while promising and exciting, we do not yet have the methodological tool set that will enable us to routinely use tertiary protein structures in the context of single-copy ortholog phylogenomics.
DOI: 10.6084/m9.figshare.30519230.v1
title: Protein tertiary structure is no better than poorly modelled amino acid sequences at resolving bilaterian relationships

description: The exponential increase in the availability of protein tertiary structures has re-ignited interest in their suitability for phylogenetic inference. Despite claims that this data type vastly outperforms primary sequences in resolving deep-time relationships, they have not held outside of paralog-rich protein family tree inference. Subsequent work on a standard, though taxon-poor, single-copy ortholog data set found that sequence-only data recovered considerably more uncontested metazoan relationships than the structure-only data. Here, we have extended these experiments to a taxon-rich data set, compared sequence-only, structure-only and combined data sets under model-based maximum likelihood tree inference, using supermatrix and supertree approaches. We also compared the performance of the model and distance-based structure-only tree inferences. We found that, even with minimal mitigation of sources of error, species trees inferred from sequence-only data were more similar to the canonical metazoan tree than all structure-aware trees, with conflicts between the canonical and inferred sequence trees explained by well-known cases of systematic error due to long-branch attraction (LBA). Within the structure-only analyses, which were just as prone to LBA, we found the neighbour-joining trees inferred from the 3Di-based Fident distance matrices to outperform the model-based analyses of 3Di “sequences”. Thus, while promising and exciting, we do not yet have the methodological tool set that will enable us to routinely use tertiary protein structures in the context of single-copy ortholog phylogenomics.
DOI: 10.15468/dl.czzmhf
title: Occurrence Download

description: A dataset containing 44 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geophis blanchardi"
 ]
}

 The dataset includes 44 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012675-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p5rh78
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Amanita tuza"
 ]
}

 The dataset includes 57 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012676-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2djrhu
title: Occurrence Download

description: A dataset containing 372288 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "DecimalLatitude is greater than or equal to 29.085278",
 "DecimalLatitude is less than or equal to 34.085278",
 "DecimalLongitude is greater than or equal to -110.0",
 "DecimalLongitude is less than or equal to -105.0",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 372288 records from 325 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0012634-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.shqxx4
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Kinosternon dunni Schmidt, 1947"
 ]
}

 The dataset includes 77 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036892-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5zjxe6
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "Geometry POLYGON((-79.797 37.446,-79.797 39.715,-77.114 39.715,-77.114 37.446,-79.797 37.446))",
 "HasCoordinate is true",
 "TaxonKey is Ampelopsis brevipedunculata (Maxim.) Trautv.",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008805-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zh2ubw
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Epidendrum riofrioae Hágsater, F.Werner & E.Santiago"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0161323-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p77aqq
title: Occurrence Download

description: A dataset containing 6195 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Setophaga plumbea (Lawrence, 1877)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 6195 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021254-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vj7jru
title: Occurrence Download

description: A dataset containing 1667138 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is CSIC-Real Jardín Botánico-Anthos. Sistema de Información de las Plantas de España"
 ]
}

 The dataset includes 1667138 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0409690-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.