cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/9fkp5zw4xt.1
title: Perceptions of the COVID-19 pandemic and challenges of the implementation of the virtual methodology of Student Subjectivity

description: La suspensión obligatoria de clases presenciales causada por la COVID-19, ha llevado a la educación brindada por la escuela fuera de ella. Dado que estudiantes y profesores no pueden reunirse en un mismo espacio físico, se recurre a la implementación de diferentes metodologías educativas, como la virtual, para llevar las clases a las casas. Este fenómeno escolar genera importantes cambios metodológicos en el campo educativo, ejemplo de ello son las instituciones que deben recurrir a la educación virtual como solución a la contingencia. Ahora bien, la implementación de estos cambios ha sido una necesidad repentina y de carácter urgente, limitando la posibilidad de una adecuada planeación y organización. Al ser una acción poco pensada, pueden generar importantes consecuencias o repercusiones en los procesos educativos desarrollados hasta este momento. Por otra parte, es posible que esos cambios obligados también generen aprendizajes y nuevas reflexiones que permitan ampliar la visión tradicional que se ha mantenido hasta el día de hoy en el campo educativo. A partir del punto de vista, experiencias y percepciones de los estudiantes, en este artículo se pretende identificar las consecuencias (ya sean debilidades o fortalezas) del cambio metodológico para implementar la educación virtual; que pueden contribuir a procesos reflexivos y propositivos que permitan pensar el aprender de la experiencia virtual y la escuela en casa.
DOI: 10.17632/x2cz59gn58.1
title: Nd and Sr isotope data of the Badenian (Middle Miocene) primary gypsum deposits of the Carpathian Foredeep

description: Primary gypsum selenites were collected in 2021 from the Badenian (Middle Miocene) evaporite successions of the northern and eastern margins of the Carpathian Foredeep. The gypsum succession is cyclic in nature and well-exposed in southern Poland and western Ukraine. Selenite crystals have been dissolved; neodymium and samarium were isolated using column chromatography and analyzed by a multi-collector mass spectrometer (TIMS). The data demonstrate that Nd isotopes are more sensitive than Sr isotopes in detecting contributions of marine and/or non-marine waters during mixing processes.
DOI: 10.17632/f95b28xczj.1
title: Nurse-led PrEP Delivery among Young Women: A Pilot Study in Uganda

description: The global decline in HIV infections among adolescent girls and young women (AGYW) is much slower than their male peers. HIV pre-exposure prophylaxis (PrEP) uptake is low among AGYW perhaps because it is accessed through clinicians in HIV clinics that are highly medicalized and associated with stigma. We aimed to determine the feasibility and acceptability of an alternative PrEP delivery model, led and independently run by nurses. We conducted a pilot study among a cohort of 59 PrEP-eligible AGYW at Kawaala Health Centre IV in Kampala, Uganda. Acceptability was defined as the proportion of eligible AGYW who initiated PrEP. We used a time and motion study to evaluate feasibility by estimating the time spent by AGYW to complete a PrEP visit and by nurse-providers in conducting PrEP-related activities. We measured PrEP adherence using self-report and estimated PrEP retention as the proportion returning for month one, three, and six study visits. The median age of AGYW was 22 years (Interquartile range [IQR] 21-23); 47% (28/59) did not know their partner’s HIV status and 2% (1/59) had a partner with HIV. At study enrolment, 37% (22/59) of participants chose injectable contraceptives, 47% (28/59) had ever heard of PrEP but only 3% (2/59) had ever used PrEP. PrEP-initiation visits were estimated to last ~95 minutes inclusive of waiting time and workflow interruptions but not research procedures and COVID-19 screening. Median retention was 5 months; 49 (83%) returned at month one, 37 (63%) at month three, and 24 (41%) at month six. Self-reported adherence was good (≤3 pills missed in 30 days) for 65% (32/49) participants at month one but poor (≥9 pills missed in 30 days) at the month two and four visits. Nurse-delivered PrEP was acceptable and feasible for AGYW attending a family planning clinic in Uganda. HIV programs should consider integrating PrEP into existing sexual and reproductive health services for young women.
DOI: 10.17632/td5yr4thzj.1
title: Review of wellness programs of the District University of Bogotá and Guidelines for cultural policies in the university environment

description: Lineamientos de políticas culturales en el ámbito universitario para la revisión de programas de bienestar de la Universidad Distrital de Bogotá
DOI: 10.17632/tf585hwkj3.1
title: The fission yeast SUMO-targeted Ubiquitin Ligase Slx8 functionally associates with clustered centromeres and the silent mating type region at the nuclear periphery

description: Source data files of the article "The fission yeast SUMO-targeted Ubiquitin Ligase Slx8 functionally associates with clustered centromeres and the silent mating type region at the nuclear periphery"

Shrena Chakraborty1,2 , Joanna Strachan3, Kamila Schirmeisen1,2, Laetitia Besse5, Eve Mercier1,2 Karine Fréon1,2, Haidao Zhang3, Ning Zhao3, Elizabeth H Bayne3* Sarah AE Lambert1,2,7,*



1. Institut Curie, Université PSL, CNRS UMR3348, 91400 Orsay, France.
2. Université Paris-Saclay, CNRS UMR3348, 91400 Orsay, France.
3. Institute of Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3FF, UK
5. Institut Curie, Université PSL, CNRS UAR2016, Inserm US43, Université Paris-Saclay, Multimodal Imaging Center, 91400 Orsay, France.
7. Equipe Labélisée Ligue Nationale Contre le cancer, France

* Corresponding authors: sarah.lambert@curie.fr; Elizabeth.bayne@ed.ac.uk
DOI: 10.17632/7jvvdp6z47.1
title: Barboni M., Marquardt M., Timms N.E. and Bell E.A. (2024) - HED Zircons as a Window into the Solar System’s First Crust: Decoupling Primordial Differentiation, Metamorphism and Impact Events through Textural and Chemical Studies.

description: Table S1 contains U-Pb isotopic data for HED zircons presented in Barboni et al., 2024 (GCA), as well as Graphs appearing in Figure 4; Table S2 contains trace elements data for HED zircons presented in Barboni et al., 2024 (GCA) as well as graphs appearing on Figure 5; Supplement contains all SEM, CL and EBSD images, plus additional methodology details presented in Barboni et al., 2024 (GCA). Illustrator files for Figures 1,2,3 and 6 is also provided. Excel version of Table 1 is also provided.
DOI: 10.17632/y5mmktt53b.1
title: LDHU3_17.0810

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/vwssdr9z5w.1
title: LDHU3_17.0800

description: DnaJ domain-containing protein | JDP10 | J10; Leishmania donovani (HU3 strain)
DOI: 10.17632/s64mvk8v7k.2
title: Drivers of geophagy in red brocket deer (Mazama americana) at Amazonian interior forest mineral licks

description: Mineral licks are key ecological components of the Amazon rainforest, providing critical dietary functions for herbivorous and frugivorous mammals, which help maintain the structure and function of the forest itself through seed and nutrient dispersal. One of the most frequent visitors of interior forest mineral licks in the Amazon is the red brocket deer (Mazama americana), a large-bodied ruminant frugivore and seed predator. While several hypotheses for the drivers of geophagy exist, including mineral supplementation, toxin adsorption, and habitat selection, robust data on geophagy for the red brocket deer for large numbers of mineral licks is nonexistent. We used soil data from 83 mineral licks in conjunction with camera trap data from 52 of those mineral licks and a mixed-effects modeling approach to test the three proposed hypotheses of geophagy for the red brocket deer. We found that consumed soils at mineral licks had elevated concentrations of almost all major and minor biologically active minerals measured, including Ca, Na, Mg, K, Cu, Zn, and Mn. Model results suggest that all three hypotheses hold true to some extent for the red brocket deer, with the greatest support for the mineral supplementation hypothesis, in particular with respect to Mg, Ca, Na, Cu, and Zn. This study provides critical information on the feeding ecology of the red brocket deer in the wild, and the first robust analysis of geophagy of an Amazonian mammal involving a large sample size of interior forest mineral licks.
DOI: 10.17632/f9frdv2xbh.1
title: Raw Data Determines the Adulteration of Rice Bran with Rice Husks using Ultrasonic Waves

description: Raw data determines adulteration of rice bran with rice husk using ultrasonic waves, amplitude, attenuation and velocity
DOI: 10.15468/dl.x9ygm9
title: Occurrence Download

description: A dataset containing 406163 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is World Plant Specimen from the Herbaria in China"
 ]
}

 The dataset includes 406163 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004295-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/sjj6ph89b3.1
title: LDHU3_17.0890

description: Kinesin-like protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/bm26bgg289.2
title: Crisaborole reverses dysregulation of the mild to moderate atopic dermatitis proteome towards nonlesional and normal skin

description: Background: Safe and effective long-term topical treatments for atopic dermatitis (AD) remain limited. 
Objective: In this phase 2a, single-center, intrapatient, vehicle-controlled study, we examine the mechanism of action of crisaborole 2% ointment, a topical nonsteroidal PDE4 inhibitor, in a proteomic analysis of 40 adults with mild-to-moderate AD and 20 healthy subjects.
Methods: Within the AD cohort, two target lesions were randomized in an intrapatient (1:1) manner to double-blind crisaborole/vehicle applied twice daily for 14 days. Punch biopsy specimens were collected for biomarker analysis at baseline from all participants, then from AD patients only at day 8 (optional) and day 15.
Results: Compared to the vehicle, crisaborole significantly reversed dysregulation of the overall lesional proteome and of key markers and pathways (e.g. Th2, Th17/Th22, T-cell activation) associated with AD pathogenesis towards both nonlesional and normal skin. Significant clinical correlations were observed with markers associated with nociception and Th2, Th17, and neutrophilic activation.
Limitations: Study limitations include predominance of white patients in the cohort, relatively short treatment time, and regimented administration of crisaborole.
Conclusion: Our results demonstrate crisaborole-induced normalization of the AD proteome towards a non-lesional molecular phenotype and further support topical PDE4 inhibition in the treatment of mild-to-moderate AD.
DOI: 10.17632/mnb2g87h6v.3
title: Data from "Laboratory growth capacity of an invasive cyanobacterium (Microcystis aeruginosa) on organic substrates from surface waters of permafrost peatlands"

description: This data set is related to a batch incubation of Microcystis aeruginosa on various aqueous organic substrates from permafrost peatlands. This experiment was set up to study this invasive cyanobacteria's potential growth on typical permafrost peatlands surface waters.
DOI: 10.17632/94kjxx4ddg.2
title: Reproducible data and software code for the study "Effect of different release strategies on movements and mortality in a restocked avian scavenger"

description: The following document contains information, about the 2 datasets that can be used to replicate data analysis of the study entitled “Effect of different release strategies on movements and mortality in a restocked avian scavenger”. The zipped folder contains two datasets, two scripts for replicating our analyses in R and one README file, with data specifications.
DOI: 10.17632/ngh58j6c6w.2
title: Supplementary files of "TMT-based quantitative proteome data of MSP1 overexpressed rice"

description: Supplementary files related to the data article "TMT-based quantitative proteome data of MSP1 overexpressed rice"
C.W. Min, J.W. Jang, G.H. Lee, G. Ravi, S.T. Kim. Data in Brief (2022).
This article reporting potential PRR candidates which may function as receptor for recognition of MSP1 in rice. This data complements the original research article published in Journal of Proteomics: C.W. Min, J.W. Jang, G.H. Lee, R. Gupta, H.J. Park, H.S. Cho, S.R. Park, S. Kwon, L. Cho, K. Jung, Y. Kim, Y. Wang, S.T. Kim, TMT-based quantitative membrane proteomics identified PRRs potentially involved in the perception of MSP1 in rice leaves, J. Proteomics 267 (2022) 104687, https://doi.org/10.1016/j.jprot.2022.104687.

Supplementary table legends
Supplementary Table 1. List of primers used in this study.
Supplementary Table 2. Identification of significantly modulated proteins in the rice leaves by TMT-based quantitative proteomic analysis.
Supplementary Table 3. MapMan analysis of whole differential proteins.
Supplementary Table 4. Functional characterization of proteins related to RLK, MAPK, calcium signaling, hormone signaling, and stress & redox using MapMan analysis.
DOI: 10.17632/2fyxbm56r2.1
title: Dataset_Journal_Empirical Investigation on Indonesia's External Debt Period 1999–2022

description: This dataset contains data from various sources, such as the Ministry of Finance of the Republic of Indonesia, the Central Bureau of Statistics of the Republic of Indonesia, Bank Indonesia, and the World Bank. The data was used in a journal article titled “Empirical Investigation on Indonesia’s External Debt Period 1999–2022”. The data was formatted using Microsoft Excel and analyzed using EViews Enterprise Edition, a statistical software.
DOI: 10.15468/dl.yf3dqg
title: Occurrence Download

description: A dataset containing 15455 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Laboratorio de Entomología y Control de Plagas del Instituto Cavanilles de Biodiversidad y Biología Evolutiva de la Universidad de Valencia: ENV"
 ]
}

 The dataset includes 15455 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004305-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/vrf9zdw4dr.1
title: Dataset: Effect of chronic heat stress and inactive Salmonella Enteritidis on the immune-neuroendocrine interface of adult Japanese quail.

description: Abstract: Birds integrate challenging situations into the Immuno-neuroendocrine (INE) system to maintain homeostasis, but multiple challenges can compromise their response, impairing welfare. Global warming and climate change have created new scenarios increasing the chances for chronic heat stress (CHS) exposures. Although immunosuppression caused by CHS can be reversed when conditions normalize, it may impair abilities to cope with new/successive immune challenges. We evaluated in adult Japanese quail (Coturnix coturnix), the effect of the succession of CHS and an immune challenge on the INE interface. Quails were exposed to 9 days of CHS. Then, we applied an immune challenge with Salmonella ser. Enteritidis antigen (ICH). Ten quail pairs (1 male and 1 female) were used for each combination treatment (non-CHS/non-ICH, non-CHS/ICH, CHS/non-ICH, and CHS/ICH), totalizing n = 80. Inflammatory and humoral immune responses, heterophils/lymphocytes (H/L) ratio, blood glucose concentration, malondialdehyde (MDA) levels, and superoxide dismutase (SOD) activity were assessed 14 days after the challenges ended. No differences were found in inflammatory or humoral immune responses. The H/L ratio was lower in males and, regardless of sex, birds submitted to CHS showed decreased responses. CHS-males exhibited lower glucose levels, while females kept them unchanged. Females showed greater MDA levels than males regardless of treatments. Female antioxidant (SOD) capacity showed higher values when going through CHS or ICH than CHS/Non-ICH males. No differences were found in total blood proteins among treatments. In conclusion, sequential challenges did not negatively affect humoral responses or pro-inflammatory potential in quail. The observed sex disparities in the basal H/L ratio, energy balance/sterile inflammation potential, and oxidative status following the CHS and ICH challenges, suggest that males are more susceptible than females. If confirmed, focus should be primary on males when aiming on strategies to mitigate welfare-related challenges.
DOI: 10.17632/ydbm2v5c7z.1
title: LINF_290008000

description: Forkhead-associated (FHA) domain-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/5yrj6bpw2f.1
title: LINF_290008900

description: RNA binding protein | DRBD1; Leishmania infantum (strain JPCM5)
DOI: 10.17632/7z8t8s6r37.1
title: LINF_290006000

description: DOCK-type C2 domain-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/6zbg352m25.1
title: n3-Polyunsaturated fatty acids drive differentiation of H3K27M glial progenitors and restrict glioma growth

description: Lipidomic data from cells and media
DOI: 10.17632/8jc3hwzxnv.1
title: epiugvof: Efficient polytope intersection for unsplit geometric VOF methods on arbitrary grids

description: The software package includes FORTRAN routines with improved accuracy and computational efficiency, along with added capabilities, to perform analytic and geometric operations involving intersections between half-spaces or hyperplanes and 2- or 3- polytopes (polygons or polyhedra, either convex or non-convex) that typically arise in advanced volume of fluid (VOF) methods on arbitrary grids. To show the new capabilities and performance improvements, the proposed tools have been included in a PLIC (piecewise linear interface calculation) reconstruction method (the conservative level contour interface reconstruction, CLCIR, method) and two advection methods: a fluid-volume intersection advection (FVIA) method (the edge-matched flux polyhedron advection, EMFPA, method) and a new wetted-area time-integration advection (WATIA) method. A test program has been implemented to deform a spherical fluid body under a prescribed velocity field using the different reconstruction and advection methods on several structured and unstructured grids.
DOI: 10.17632/vxyd3nxw6z.1
title: Microtubule end-on attachment maturation regulates Mps1 association with its kinetochore receptor. Pleuger et al.

description: This repository contains the raw data for the publication "Microtubule end-on attachment maturation regulates Mps1 association with its kinetochore receptor." by Pleuger et al., CurrentBiology 2024.
doi: https://doi.org/10.1016/j.cub.2024.03.062
DOI: 10.17632/bhjp3m2sbp.2
title: The Inheritance of Alternative Nest Architectural Traditions in Stingless Bees

description: Dataset and R script for the analyses related to intra-specific nest architecture variation in a neotropical stingless bee Scaptotrigona depilis.
DOI: 10.17632/x3bpkd8rxs.1
title: LINF_290010300

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/sr3h49779p.1
title: LINF_290011100

description: Protein with C2H2-type zinc finger; Leishmania infantum (strain JPCM5)
DOI: 10.17632/8m7b34s5m7.1
title: Achieving Disruptive Sustainability in Organic Consumption through Institutional Alignment

description: By having consumers choose between products with different levels of attributes (i.e., value perception, channel norms, and certification modes), we aim to understand the impact of various attributes on consumer choices. This study utilizes the conditional logit (CL) model to elucidate the impact of each attribute on consumers' choices, as response data were modeled within a utility function of the conditional logit (CL) model. The data includes STATA code, result, and databased.
DOI: 10.17632/7xgr36j9k5.2
title: Data for: Population dynamics of the Lyme disease bacterium, Borrelia burgdorferi, during rapid range expansion in New York State

description: Tick collection data, raw ospC typing data, and R code used for data analyses and figure generation for the manuscript "Population dynamics of the Lyme disease bacterium, Borrelia burgdorferi, during rapid range expansion in New York State" submitted to Molecular Ecology. 
Tick collection data indicate the sites that were included in the study and shows the number of ticks that were collected, tested for B. burgdorferi, and positive for B. burgdorferi for each site and year that collections took place. 
OspC typing data show the number of ticks from which ospC was successfully amplified and the number of ticks that were positive for each ospC genotype in each of the 79 site-years included in the study.
R code shows the script used for analyses and figure generation in the R environment.
DOI: 10.17632/tf585hwkj3.2
title: The fission yeast SUMO-targeted Ubiquitin Ligase Slx8 functionally associates with clustered centromeres and the silent mating type region at the nuclear periphery

description: Source data files of the article "The fission yeast SUMO-targeted Ubiquitin Ligase Slx8 functionally associates with clustered centromeres and the silent mating type region at the nuclear periphery"

Shrena Chakraborty1,2 , Joanna Strachan3, Kamila Schirmeisen1,2, Laetitia Besse5, Eve Mercier1,2 Karine Fréon1,2, Haidao Zhang3, Ning Zhao3, Elizabeth H Bayne3* Sarah AE Lambert1,2,7,*



1. Institut Curie, Université PSL, CNRS UMR3348, 91400 Orsay, France.
2. Université Paris-Saclay, CNRS UMR3348, 91400 Orsay, France.
3. Institute of Cell Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3FF, UK
5. Institut Curie, Université PSL, CNRS UAR2016, Inserm US43, Université Paris-Saclay, Multimodal Imaging Center, 91400 Orsay, France.
7. Equipe Labélisée Ligue Nationale Contre le cancer, France

* Corresponding authors: sarah.lambert@curie.fr; Elizabeth.bayne@ed.ac.uk
DOI: 10.17632/gpnjw5xxm7.1
title: Low-dose ethanol increases aflatoxin production due to adh1-dependent incorporation of ethanol into aflatoxin biosynthesis

description: Source Data files for the iScience manuscript ISCIENCE-D-22-01736R2
DOI: 10.17632/k553g7cffp.1
title: LDHU3_06.1190

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/f9frdv2xbh.2
title: Raw Data Determines the Adulteration of Rice Bran with Rice Husks using Ultrasonic Waves

description: Raw data determines adulteration of rice bran with rice husk using ultrasonic waves, amplitude, attenuation and velocity
DOI: 10.17632/9hrdhxdt5g.1
title: LDHU3_06.1080

description: Aminoacyl-tRNA hydrolase; Leishmania donovani (HU3 strain)
DOI: 10.17632/3wxvvb2372.1
title: LDHU3_06.1310

description: Noncatalytic component of the GPI-mannosyltransferase I (GPI-MT I) complex | PBN1-like protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/mhyw3prm6h.1
title: LDHU3_06.1370

description: Nuclear Dbf2-related kinase; Leishmania donovani (HU3 strain)