cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14172633
title: Data sets for the publication "Repulsive interatomic potentials calculated at three levels of theory" by K. Nordlund, S. Lehtola and G. Hobler.

description: This file system package contains data sets for the publication "Repulsive interatomic potentials calculated at three levels of theory" by K. Nordlund, S. Lehtola and G. Hobler. It presents three quantum chemically calculated data sets ("MP2", "DMol", and "ZBL pair-specific") for diatomic interatomic potentials in the repulsive region, where the separation of the atoms is so short that the potential energy is >> 10 eV. The set also contains the fitted parameters for analytical NLH repulsive potentials that consist of a Coulomb term multiplied by a three-exponential screening function.

The MP2 data sets contain potential data for all elements pairs Z1+Z2<=36, and the DMol, ZBL pair-specific and NLH potentials are proved for all elements pairs Z1, Z2 <=92.

The data sets are arranged in the following directories:

mp2/      : Data sets for the Hartree-Fock Moller-Plesset2 level calculations

dmol/     : Data sets for the Density Functional Theory calculations with the DMOL code

nlh/      : Coefficients for the fits of the Nordlund-Lehtola-Hobler potential to the DMol data sets

zbl/      : Data sets for the pair-specific Ziegler-Biersack-Littmark potential calculations

zbluniv/  : A directory with a Linux bash/awk script that generates the ZBL universal potential.

zblspec/  : Coefficients for the pair-specific ZBL screening functions as contained in SRIM-2013.

Each subdirectory has its own README.txt file giving additional details on the content of the directory and its subdirectories.
DOI: 10.5281/zenodo.15097303
title: Data sets for the publication "Repulsive interatomic potentials calculated at three levels of theory" by K. Nordlund, S. Lehtola and G. Hobler.

description: This file system package contains data sets for the publication "Repulsive interatomic potentials calculated at three levels of theory" by K. Nordlund, S. Lehtola and G. Hobler. It presents three quantum chemically calculated data sets ("MP2", "DMol", and "ZBL pair-specific") for diatomic interatomic potentials in the repulsive region, where the separation of the atoms is so short that the potential energy is >> 10 eV. The set also contains the fitted parameters for analytical NLH repulsive potentials that consist of a Coulomb term multiplied by a three-exponential screening function.

The MP2 data sets contain potential data for all elements pairs Z1+Z2<=36, and the DMol, ZBL pair-specific and NLH potentials are proved for all elements pairs Z1, Z2 <=92.

The data sets are arranged in the following directories:

mp2/      : Data sets for the Hartree-Fock Moller-Plesset2 level calculations

dmol/     : Data sets for the Density Functional Theory calculations with the DMOL code

nlh/      : Coefficients for the fits of the Nordlund-Lehtola-Hobler potential to the DMol data sets

zbl/      : Data sets for the pair-specific Ziegler-Biersack-Littmark potential calculations

zbluniv/  : A directory with a Linux bash/awk script that generates the ZBL universal potential.

zblspec/  : Coefficients for the pair-specific ZBL screening functions as contained in SRIM-2013.

Each subdirectory has its own README.txt file giving additional details on the content of the directory and its subdirectories.
DOI: 10.15468/dl.6haqmh
title: Occurrence Download

description: A dataset containing 5522 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 "Geometry POLYGON((-74.47397 6.55975,-74.49494 6.42385,-74.41449 6.40864,-74.38172 6.40564,-74.3781 6.42031,-74.38534 6.43111,-74.40075 6.45,-74.41085 6.46184,-74.41059 6.47829,-74.39868 6.49397,-74.39739 6.50528,-74.40696 6.52944,-74.41395 6.54615,-74.40799 6.57731,-74.41213 6.58013,-74.42924 6.58214,-74.47397 6.55975))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "Year 2004-2025"
 ]
}

 The dataset includes 5522 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004079-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mm97ct
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Atherinella balsana (Meek, 1902)"
 ]
}

 The dataset includes 83 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004083-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.trheuc
title: Occurrence Download

description: A dataset containing 956 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((-33.56069 34.80375,-23.14375 34.80375,-23.14375 41.98574,-33.56069 41.98574,-33.56069 34.80375))",
 "TaxonKey is Carex pendula Huds.",
 "Year 1975-2025"
 ]
}

 The dataset includes 956 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004081-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nenwcd
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((-33.36085 35.51565,-23.7309 35.51565,-23.7309 41.05396,-33.36085 41.05396,-33.36085 35.51565))",
 "TaxonKey is Ceradenia jungermannioides (Klotzsch) L.E.Bishop",
 "Year 1975-2025"
 ]
}

 The dataset includes 34 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004084-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/z2n5skkprj.1
title: Propensity of European grayling Thymallus thymallus to migrate is influenced by individual behavioural traits, age, and body size

description: Here, we provide data.
DOI: 10.17632/kzrn9t5n3g.1
title: Paleoenvironments, Provenance, and Reservoir Characterization: Integrating Litho-Ichnofacies, Petrography, and Geochemistry of Compound Sandstone-Shale in the Jurassic Datta Formation, Western Salt Range, NW Himalayas (DATASET)

description: This dataset provides supporting materials for the manuscript "Paleoenvironments, Provenance, and Reservoir Characterization: Integrating Litho-Ichnofacies, Petrography, and Geochemistry of Compound Sandstone-Shale in the Jurassic Datta Formation, Western Salt Range, NW Himalayas." It includes detailed petrographic data, geochemical analyses, ichnofacies classifications, and sedimentological observations supporting interpretations of depositional environments, provenance, and reservoir potential.
DOI: 10.17632/4mpzjtsnjv
title: Data and Code Archive: Consistent Climate Fingerprinting

description: Data and Code to accompany McKitrick, R (2025) "Consistent Climate Fingerprinting"
DOI: 10.17632/4mpzjtsnjv.1
title: Data and Code Archive: Consistent Climate Fingerprinting

description: Data and Code to accompany McKitrick, R (2025) "Consistent Climate Fingerprinting"
DOI: 10.17632/dfx7p8mpsw.1
title: RIS Format Reviewed Journal articles

description: The RIS format data used for the bibliography of reviewed journal articles in the study.
DOI: 10.17632/2ft796thyz.1
title: CSV Format_Articles_for_VOS

description: CSV Format reviewed articles for VOS Viewer analysis
DOI: 10.17632/9zckfnz2ft.1
title: Geodynamics of the Makran Subduction Zone inferred from Relocated Seismicity

description: The Makran Subduction Zone is unusual, with an ENE-WSW trending volcanic arc that is nonparallel to its ~E-W trending accretionary prism. The discrepancy has been attributed to an eastward reduction of the subduction angle. To assess this theory, we relocated 146 moderate to large earthquakes in the region during the period 1968 to 2022. We found that in eastern Makran, the region with intermediate-depth earthquakes has a constant width of ~180 km, with a trend sub-parallel with the trend of the volcanic arc. The fault planes of most of the normal-faulting intermediate-depth earthquakes are also parallel to the trend of the volcanic arc. These observations suggest an ENE-WSW trending subducting plate hinge and a constant subduction angle in eastern Makran. The ~E-W trend of the intermediate-depth earthquakes in western Makran indicates an ~E-W trending subducting plate hinge. We relate the different orientation of the plate hinges in eastern and western Makran to the different shape of the overriding plates. The cumulative Wadati-Benioff zone for eastern Makran shows a subduction angle of ~15o in the depth range of ~45-80 km, increasing to ~45o at depths greater than 80 km. The significant component of strike-slip faulting of the intermediate-depth events in western Makran implies that the subducting plate in western and eastern Makran experience different stress regimes. Alignment of a consid-erable number of intermediate-depth earthquakes along narrow ENE-WSW lineaments implies a pre-existing weakness in the subducting plate.
DOI: 10.17632/tvnjdkfctw.1
title: Misscarriage_Dataset

description: The dataset contained 600,000 records with 10 features: maternal age, BMI, and pregnancy history.Preprocessing was done, from handling the missing data to feature scaling and encoding categorical data
DOI: 10.17632/z52r2msm6t
title: ANALYSIS OF PLANTAR MUSCLE STRENGTH AND ACTIVITY IN PEOPLE WITH TYPE 2 DIABETES AFTER A STRENGTHENING PROGRAM: A RANDOMIZED CONTROLLED CROSS-OVER CLINICAL STUDY

description: Data set for an investigation into strengthening the intrinsic muscles of the feet in type 2 diabetic volunteers. All volunteers signed an informed consent form. The muscle strength of the flexors of each toe was collected through three maximum voluntary isometric contractions (MIVC) of 10 seconds each, with a rest interval of one minute. The values of the maximum voluntary isometric force minus the minimum force exerted at rest on each toe in three muscle contractions were subtracted from the electromyograph. From this number, the mean and standard deviation were extracted.
DOI: 10.17632/z52r2msm6t.1
title: ANALYSIS OF PLANTAR MUSCLE STRENGTH AND ACTIVITY IN PEOPLE WITH TYPE 2 DIABETES AFTER A STRENGTHENING PROGRAM: A RANDOMIZED CONTROLLED CROSS-OVER CLINICAL STUDY

description: Data set for an investigation into strengthening the intrinsic muscles of the feet in type 2 diabetic volunteers. All volunteers signed an informed consent form. The muscle strength of the flexors of each toe was collected through three maximum voluntary isometric contractions (MIVC) of 10 seconds each, with a rest interval of one minute. The values of the maximum voluntary isometric force minus the minimum force exerted at rest on each toe in three muscle contractions were subtracted from the electromyograph. From this number, the mean and standard deviation were extracted.
DOI: 10.15468/dl.tnr5vv
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lycopodiophyta"
 ]
}

 The dataset includes 21 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004089-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z38w6p
title: Occurrence Download

description: A dataset containing 38 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Helminthoglypta fontiphila Gregg, 1931"
 ]
}

 The dataset includes 38 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004088-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/gv88sw9kh7.1
title: palate mucoepidermoid carcinoma

description: The supplement data about the validity of immunotherapy against palate mucoepidermoid carcinoma
DOI: 10.15468/dl.wsxjw7
title: Occurrence Download

description: A dataset containing 694 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Xanthoceras sorbifolia Bunge"
 ]
}

 The dataset includes 694 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004087-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/98ws3ypng8.1
title: LINF_130007400

description: Aladin-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.m8jgwd
title: Occurrence Download

description: A dataset containing 1177 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Registros de flora y fauna presentes en el Cerro Tutelar de Envigado, asociados al estudio de ampliación del Área de Recreación Humedal El Trianón – La Heliodora"
 ]
}

 The dataset includes 1177 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004090-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mmk7u5
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((-32.57863 34.68746,-22.54582 34.68746,-22.54582 41.07668,-32.57863 41.07668,-32.57863 34.68746))",
 "TaxonKey is Ophioglossum azoricum C.Presl",
 "Year 1975-2025"
 ]
}

 The dataset includes 69 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004086-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/7tng77y83h.1
title: LINF_130008900

description: Sister chromatid cohesion protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/cgb5dmy87r
title: TAF2 condensation in nuclear speckles links basal transcription factor TFIID to RNA splicing factors. Bhuiyan et al.

description: Uncropped Western blot images for the manuscript entitled "TAF2 condensation in nuclear speckles links basal transcription factor TFIID to RNA splicing factors". Bhuiyan et al.
DOI: 10.17632/cgb5dmy87r.1
title: TAF2 condensation in nuclear speckles links basal transcription factor TFIID to RNA splicing factors. Bhuiyan et al.

description: Uncropped Western blot images for the manuscript entitled "TAF2 condensation in nuclear speckles links basal transcription factor TFIID to RNA splicing factors". Bhuiyan et al.
DOI: 10.17632/vvdf32r65s.1
title: LINF_130009000

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/dty9n7cxf4.1
title: LINF_130009700

description: Tropomyosin-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/77dpb2n9wc
title: The tissue-specific DNA repair mechanisms and adaptive evolution in silkworm

description: How organisms balance genetic stability with environmental adaptability remains a fundamental question in evolutionary biology. Using the silkworm, we investigated how genomes reconcile these competing demands. Through spatiotemporal genomic analysis of 121 individuals, we discovered three compensatory mechanisms: 1) Gonads prioritize DNA repair to protect germline integrity, 2) Developmental transitions employ tissue-specific copy number variations enabling dosage-controlled tissue remodeling, and 3) non-coding regions tolerate mutations while maintaining functional constraints on coding sequences. Notably, paralogous gene clusters showed concentrated variation in membrane transport pathways, suggesting reservoirs for adaptive innovation. Our findings demonstrate that silkworms resolve the stability-plasticity paradox through developmental stage-specific mutation management, safeguarding germline fidelity while permitting somatic evolution. This establishes metamorphosing insects as models for studying adaptive genome dynamics in rapidly developing eukaryotes.
DOI: 10.17632/77dpb2n9wc.1
title: The tissue-specific DNA repair mechanisms and adaptive evolution in silkworm

description: How organisms balance genetic stability with environmental adaptability remains a fundamental question in evolutionary biology. Using the silkworm, we investigated how genomes reconcile these competing demands. Through spatiotemporal genomic analysis of 121 individuals, we discovered three compensatory mechanisms: 1) Gonads prioritize DNA repair to protect germline integrity, 2) Developmental transitions employ tissue-specific copy number variations enabling dosage-controlled tissue remodeling, and 3) non-coding regions tolerate mutations while maintaining functional constraints on coding sequences. Notably, paralogous gene clusters showed concentrated variation in membrane transport pathways, suggesting reservoirs for adaptive innovation. Our findings demonstrate that silkworms resolve the stability-plasticity paradox through developmental stage-specific mutation management, safeguarding germline fidelity while permitting somatic evolution. This establishes metamorphosing insects as models for studying adaptive genome dynamics in rapidly developing eukaryotes.
DOI: 10.17632/x9x4d95j7x
title: eDNA dataset

description: This dataset encompasses macroinvertebrate diversity data from the Burhatong and Hailan Rivers within China's Tumen River Basin, collected in June 2022. It includes ethanol - based eDNA metabarcoding data covering 174 taxa, and water - sample eDNA metabarcoding data identifying 212 taxa. This information is crucial for analyzing biodiversity assessment methods and serves as a resource for future research on freshwater habitats and eDNA applications.
DOI: 10.17632/x9x4d95j7x.1
title: eDNA dataset

description: This dataset encompasses macroinvertebrate diversity data from the Burhatong and Hailan Rivers within China's Tumen River Basin, collected in June 2022. It includes ethanol - based eDNA metabarcoding data covering 174 taxa, and water - sample eDNA metabarcoding data identifying 212 taxa. This information is crucial for analyzing biodiversity assessment methods and serves as a resource for future research on freshwater habitats and eDNA applications.
DOI: 10.17632/xf5jj6m59p.1
title: LINF_130009800

description: Phosphoglycerate mutase-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/svrzrwt2vs.1
title: LINF_130010300

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.3886/e224442
title: Government Transportation Financial Statistics (GTFS) Data - Bureau of Transportation Statistics

description: Government Transportation Financial Statistics (GTFS) provides information on transportation-related revenue and expenditures for all levels of government, including federal, state, and local, and for all modes of transportation.
DOI: 10.3886/e224442v1
title: Government Transportation Financial Statistics (GTFS) Data - Bureau of Transportation Statistics

description: Government Transportation Financial Statistics (GTFS) provides information on transportation-related revenue and expenditures for all levels of government, including federal, state, and local, and for all modes of transportation.
DOI: 10.15468/dl.gbyfxs
title: Occurrence Download

description: A dataset containing 866928 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Depth is greater than 200m",
 "BasisOfRecord is Machine Observation",
 "HasGeospatialIssue is FALSE",
 "HasCoordinate is TRUE"
 ]
}

 The dataset includes 866928 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004077-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ghh9bn
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Atherinella balsana (Meek, 1902)"
 ]
}

 The dataset includes 83 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004091-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.waffhj
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Atherinella balsana (Meek, 1902)"
 ]
}

 The dataset includes 83 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004092-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/x9wms6dbck.1
title: 10.1016/j.heliyon.2024.e27621

description: raw data of "Goat milk extracellular vesicles: Separation comparison of natural carriers for theragnostic application" doi 10.1016/j.heliyon.2024.e27621
DOI: 10.5281/zenodo.13988700
title: A 12,800-year-old Cometary Dust, Spherule, and Platinum Datum Layer Recorded in Multiple Cores from Baffin: Supplementary Tables

description: Final Supplementary Tables for:  A 12,800-year-old Cometary Dust, Spherule, and Platinum Datum Layer Recorded in Multiple Cores from Baffin
DOI: 10.5281/zenodo.13988701
title: A 12,800-year-old Spherule and Platinum Datum Layer Recorded in Multiple Ocean Cores from Baffin Bay: Supplementary Tables

description: Final Supplementary Tables for: A 12,800-year-old Spherule and Platinum Datum Layer Recorded in Multiple Ocean Cores from Baffin Bay
DOI: 10.5281/zenodo.14681287
title: A 12,800-year-old Cometary Dust, Spherule, and Platinum Datum Layer Recorded in Multiple Cores from Baffin: Supplementary Tables

description: Final Supplementary Tables for:  A 12,800-year-old Cometary Dust, Spherule, and Platinum Datum Layer Recorded in Multiple Cores from Baffin
DOI: 10.17632/756b6jsmg5.1
title: Plio-Pleistocene western retroarc magmatic evolution and its relation with variable subduction settings in the Southern Central Andes (34-38 °S) Iannelli et al. Supplementary Material

description: Iannelli et al. Supp. Mat. Table S1.presents the main petrographic description for the studied samples.

Iannelli et al. Supp. Mat. Table S2 shows the results for major, minor, and trace element analyses for the studied rocks of the Varvarco Volcanic Field.

Iannelli et al. Supp. Mat. Table S3 shows Sr, Nd, Pb isotope ratios calculated from the measurements of the current isotope ratios (TIMS), and Rb, Sr, Sm, Nd, U, Th, Pb element concentration of whole rock samples.

Iannelli et al. Supp. Mat. Table S4 shows zircons U/Pb results.
DOI: 10.15468/dl.stdejb
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Atherinella balsana (Meek, 1902)"
 ]
}

 The dataset includes 83 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004094-250325103851331/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.