cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/p98nr43rz3.2
title: Identification of Isoform p-53 Protein in CLL by Elisa Method 

description: The monoclonal p-53 antibody, PAb 240, used in the ELISA method recognizes both mutant and wild-type p-53 under denaturing conditions. Species reactivity is for human or rhesus monkey in conformity with the prospect. The monoclonal antibody PAb 240 recognizes an epitope that is structurally hidden in the wild-type conformation of p-53 and becomes exposed by denaturing the p-53 protein or the mutant conformations of p-53, where point mutations in the P-53 gene alter the terminal structure of the p-53 protein. This ELISA kit is recommended for use in serum, plasma or tissue homogenates. Using other types of sample is not supported. The sample collection protocols below were adapted from the references.
Results
Of the 20 patients studied, 14 men have aged 55-85 years and 6 women aged 39-85 years. Patients were treated at the time of these investigations with cytostatic and immunotherapy specific for CLL. For the men the results of protein concentration p-53 detection were following values, 20, 15, 18, 40, 10, 12, 14, 60, 30, 10, 13, 13, 5, 10, 15, 12,  (µg / dl) and women's results of protein concentration p-53 were 140, 30, 13, 10, (µg / dl), 
The pathological values in the 3 cases of highly elevated p-53, reflecting the concentration of p-53 protein mutant, were calculated in 2 men in the amount of 60 µg / dl, respectively in 50 µg / dl, and in the female case, it was calculated in the amount of 140 µg / dl, the frequency of chronic lymphocytic leukemia being higher in men than in women, in ratio 2/1, in accordance with the data from the specialized literature. The overall frequency of positivity of the p53 protein, in the increased number of CLL cases studied, was 15% (3 out of 20 cases). The expression of the high-concentration p53 proteins in stage 2/3 of the disease was associated with a significantly weaker response to chemotherapy (p = 0.034).
   Statistical interpretations: the concentration of p-53 protein, in the 17 cases with p-53 protein expression, after excluding the 3 out-line cases present in the study, was calculated at the average value of 16.76µg / dL. In the CLL stage III/IV (n = 3 patients (Table 1), 
    In the presented work with CLL, in the stage I/II, (n=17 patients) was registered in the average p-53 protein concentration in CLL, 16.76, (µg/dl), with mean values of hemogram: hematological parameters in peripheral blood, Leukocytes numberer = 35-50 x 10 3 / dL, Hb = 11.8g /dL; Platelet = 140 x 103/dL, Lymphocytes in peripheral blood = 65-80%. 
In some international studies, the immunological characteristics of patients with CLL having p-53 protein positive, were measured by immunohistochemistry, (IHC). In the second part of the study CLL on the stage I/II, (n=47 patients), the P-53 protein isoform concentration in reactive Lymphocyte B, the average p-53 protein concentration in CLL was on average 47 U/m with 16.7% samples studied, (7 out of 42 cases).
DOI: 10.17632/k59v85zjr5.1
title: Low-cost and open-source neonatal incubator operated by an Arduino microcontroller

description: An unacceptably large number of newborn infants die in developing countries. For a considerable number of cases (particularly in preterm infants), morbidity and mortality can be reduced by simply maintaining newborn thermal homeostasis during the first weeks of life. Unfortunately, deaths caused by prematurity remain inordinately common in low- and middle-income countries (LMICs) due to reduced access to incubators in light of the high cost of commercially available devices.  We herein describe and test a low-cost and easy-to-assemble neonatal incubator created with inexpensive materials readily available in LMICs. The incubator is based on an Arduino microcontroller. It maintains controlled temperature and relative humidity inside the main chamber while continuously measuring newborn weight progress. Moreover, the incubator has a tilting bed system and an additional independent safety temperature alarm. The performance of the novel low-cost neonatal incubator was evaluated and successfully passed the IEC 60601-2-19 standards.  In the present work, we provide all the necessary technical information, which is distributed as open source. This will enable assembly  of very low-cost (<250 €) and fully functional incubators in LMICs that should help reduce neonatal mortality. 

In this dataset there are available: stl files for 3D printing fabrication; blueprint for wood structures; PCB layout;  Arduino code; Fabrication instructions.
DOI: 10.17632/4t9xbmxszn.1
title: Premature Aging and Reduced Cancer Incidence Associated with Near-Complete Body-Wide Myc Inactivation_The original uncropped full length western blots, related to Fig. 3I, Fig. 5C, and Fig. S1G

description: The original uncropped full length western blots, related to Fig. 3I, Fig. 5C, and Fig. S1G for :
Premature Aging and Reduced Cancer Incidence Associated with Near-Complete Body-Wide Myc Inactivation
CELL-REPORTS-D-23-00748R2
DOI: 10.5519/qd.u7n6zl1d
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1476 records)
DOI: 10.5281/zenodo.7860348
title: Air quality, soil moisture, green roof moisture and weather data from Meetjestad

description: Soil moisture sensors were developed by citizen science collective Meet je Stad (Measure your City). Measure your City was started in 2015 by inhabitants of the City of Amersfoort, with the goal of measuring climate related indicators. To be able to do so, collaboration was sought with the City of Amersfoort (COA), the local Water Authority and the University of Applied Sciences of Amsterdam. For the first three years the initiative focused on measuring temperature and humidity. Importantly, citizens develop their own research questions, analyze the data together with professionals and discuss potential implications. By doing so, the collective uses citizen science to spread knowledge on both technology and climate change in the most grass-roots manner possible. Within the SCOREwater project, Measure your City was asked to expand measurements with soil moisture measurements and additional temperature and humidity sensors. An important note here is that Measure your City develops their own sensors, has developed their own data platform and uses its own gateways purchased from the Things Network. As a result, much effort is put into constructing sensors that are reliable, low-maintenance and accurate. The latter is important for the City of Amersfoort as well, which intends to not only work on shared knowledge and understanding, but also use the data for policy making. To do so the data has to be reliable. By deploying both these sensors and purchasing company-built sensors, we can compare the data to assess how reliable the Measure your City sensors are. The Measure your City can also be deployed on green roofs to measure soil moisture. Whereas the soil moisture sensor measures soil moisture on two depths (10 centimeter and 40 centimeter), the sensor on a roof only measures soil moisture on one depth. In addition to soil moisture, Measure your City also measures air temperature and relative humidity. Some sensors also measure air quality (particle matter).
DOI: 10.5281/zenodo.7860347
title: Air quality, soil moisture, green roof moisture and weather data from Meetjestad

description: Soil moisture sensors were developed by citizen science collective Meet je Stad (Measure your City). Measure your City was started in 2015 by inhabitants of the City of Amersfoort, with the goal of measuring climate related indicators. To be able to do so, collaboration was sought with the City of Amersfoort (COA), the local Water Authority and the University of Applied Sciences of Amsterdam. For the first three years the initiative focused on measuring temperature and humidity. Importantly, citizens develop their own research questions, analyze the data together with professionals and discuss potential implications. By doing so, the collective uses citizen science to spread knowledge on both technology and climate change in the most grass-roots manner possible. Within the SCOREwater project, Measure your City was asked to expand measurements with soil moisture measurements and additional temperature and humidity sensors. An important note here is that Measure your City develops their own sensors, has developed their own data platform and uses its own gateways purchased from the Things Network. As a result, much effort is put into constructing sensors that are reliable, low-maintenance and accurate. The latter is important for the City of Amersfoort as well, which intends to not only work on shared knowledge and understanding, but also use the data for policy making. To do so the data has to be reliable. By deploying both these sensors and purchasing company-built sensors, we can compare the data to assess how reliable the Measure your City sensors are. The Measure your City can also be deployed on green roofs to measure soil moisture. Whereas the soil moisture sensor measures soil moisture on two depths (10 centimeter and 40 centimeter), the sensor on a roof only measures soil moisture on one depth. In addition to soil moisture, Measure your City also measures air temperature and relative humidity. Some sensors also measure air quality (particle matter).
DOI: 10.5281/zenodo.8068173
title: Dataset for validation of app myjump2

description: The dataset shows the results obtained during the data collection
DOI: 10.5281/zenodo.8068172
title: Dataset for validation of app myjump2

description: The dataset shows the results obtained during the data collection
DOI: 10.6084/m9.figshare.23559327
title: Supplementary Material for: Sex chromosome complement and estradiol modify cocaine self-administration behaviors in male mice

description: Abstract Introduction- Women are more vulnerable to cocaine’s reinforcing effects and have a more rapid course to addiction after initial cocaine use as compared to men. Studies in rodents similarly indicate an enhanced sensitivity to the reinforcing effects of cocaine in females versus males. Levels of estradiol (E2) are correlated with vulnerability to the rewarding actions of cocaine. Here we asked if sex chromosome complement (SCC) influences vulnerability to cocaine use. Methods- We used the four core genotype (FCG) mouse that produces gonadal males and females with either XX or XY SCC. Mice were gonadectomized and implanted with either an estradiol (E2) or cholesterol-filled pellet. This allowed us to determine effects of SCC in the absence (cholesterol treated) and presence of tonic high physiological hormone levels (estradiol). Acquisition of cocaine self-administration was determined over a 12-day period using an escalated dose procedure (0.3 mg/kg/infusion, sessions 1-6; 0.6 mg/kg/infusion, sessions 6-12). Results- Without estradiol treatment, a greater percentage of castrated XY mice acquired cocaine self-administration and did so at a faster rate than XX castrates and ovariectomized XY females. These same XY males acquired sooner, infused more cocaine, and directed more nose pokes to the rewarded nose-poke hole than XX castrates and XY males receiving E2. Conclusion- Our results suggest that in gonadal male mice, SCC and estradiol can modulate the reinforcing effects of cocaine which may influence the likelihood of cocaine use.
DOI: 10.6084/m9.figshare.23559327.v1
title: Supplementary Material for: Sex chromosome complement and estradiol modify cocaine self-administration behaviors in male mice

description: Abstract Introduction- Women are more vulnerable to cocaine’s reinforcing effects and have a more rapid course to addiction after initial cocaine use as compared to men. Studies in rodents similarly indicate an enhanced sensitivity to the reinforcing effects of cocaine in females versus males. Levels of estradiol (E2) are correlated with vulnerability to the rewarding actions of cocaine. Here we asked if sex chromosome complement (SCC) influences vulnerability to cocaine use. Methods- We used the four core genotype (FCG) mouse that produces gonadal males and females with either XX or XY SCC. Mice were gonadectomized and implanted with either an estradiol (E2) or cholesterol-filled pellet. This allowed us to determine effects of SCC in the absence (cholesterol treated) and presence of tonic high physiological hormone levels (estradiol). Acquisition of cocaine self-administration was determined over a 12-day period using an escalated dose procedure (0.3 mg/kg/infusion, sessions 1-6; 0.6 mg/kg/infusion, sessions 6-12). Results- Without estradiol treatment, a greater percentage of castrated XY mice acquired cocaine self-administration and did so at a faster rate than XX castrates and ovariectomized XY females. These same XY males acquired sooner, infused more cocaine, and directed more nose pokes to the rewarded nose-poke hole than XX castrates and XY males receiving E2. Conclusion- Our results suggest that in gonadal male mice, SCC and estradiol can modulate the reinforcing effects of cocaine which may influence the likelihood of cocaine use.
DOI: 10.17632/n6496kxb8y.1
title: Calcium and iron isotope fractionation during felsic magma differentiation

description: Figures, table and supplementary materials are associated with this article.
DOI: 10.5281/zenodo.8068243
title: Triplicate MD simulations performed on the ligand Abscisic acid and the 7CKA protein for a total time of 100 ns.

description: <strong>Molecular Dynamic Simulation study</strong> Triplicate MD simulations were performed on the ligand Abscisic acid (<strong>PubChem ID: Abscisic acid</strong>) and the 7CKA protein for a total time of 100 ns. This was done to investigate the quality and stability of the complex until the point at which it converged.
DOI: 10.5281/zenodo.8068242
title: Triplicate MD simulations performed on the ligand Abscisic acid and the 7CKA protein for a total time of 100 ns.

description: <strong>Molecular Dynamic Simulation study</strong> Triplicate MD simulations were performed on the ligand Abscisic acid (<strong>PubChem ID: Abscisic acid</strong>) and the 7CKA protein for a total time of 100 ns. This was done to investigate the quality and stability of the complex until the point at which it converged.
DOI: 10.5281/zenodo.8068163
title: Dataset for "Mapping of centriolar proteins onto the post-embryonic lineage of C. elegans"

description: This is the dataset with all spreadsheets, confocal and wide field microscopy images and related scripts, related to the publication " "Mapping of centriolar proteins onto the post-embryonic lineage of <em>C. elegans</em>". Refer to the Read me file for further information.
DOI: 10.5281/zenodo.8068162
title: Dataset for "Mapping of centriolar proteins onto the post-embryonic lineage of C. elegans"

description: This is the dataset with all spreadsheets, confocal and wide field microscopy images and related scripts, related to the publication " "Mapping of centriolar proteins onto the post-embryonic lineage of <em>C. elegans</em>". Refer to the Read me file for further information.
DOI: 10.6084/m9.figshare.22659325
title: Mucin foraging enables Akkermansia muciniphila to colonize the gut and modulate the expression of sterol biosynthesis genes

description: Analysis of the genetic determinants that enable Akkermansia muciniphila to consume mucins and colonize the gastrointestinal tract
DOI: 10.6084/m9.figshare.22659325.v1
title: Mucin foraging enables Akkermansia muciniphila to colonize the gut and modulate the expression of sterol biosynthesis genes

description: Analysis of the genetic determinants that enable Akkermansia muciniphila to consume mucins and colonize the gastrointestinal tract
DOI: 10.6084/m9.figshare.22817231.v1
title: Imaging the field inside nanophotonic accelerators

description: Gatan format ; output of an EFTEM measurement with filtering slit width 7ev
DOI: 10.6084/m9.figshare.22817231
title: Imaging the field inside nanophotonic accelerators

description: Gatan format ; output of an EFTEM measurement with filtering slit width 7ev
DOI: 10.6084/m9.figshare.23225414.v1
title: Photo-produced aromatic compounds stimulate microbial degradation of dissolved organic carbon in thermokarst lakes

description: The microbial respiration response to UV light exposure (CO2-RR) and the response ratios of water properties and DOCchemistry (UV-Vis, FT-ICR MS) in ten thermokarst lakes on the Qinghai-Tibet Plateau.
DOI: 10.6084/m9.figshare.23225414
title: Photo-produced aromatic compounds stimulate microbial degradation of dissolved organic carbon in thermokarst lakes

description: The microbial respiration response to UV light exposure (CO2-RR) and the response ratios of water properties and DOCchemistry (UV-Vis, FT-ICR MS) in ten thermokarst lakes on the Qinghai-Tibet Plateau.
DOI: 10.6084/m9.figshare.22573459.v1
title: A fluorinated cation introduces new interphasial chemistries to enable high-voltage lithium metal batteries

description: Capacity, Cycling data, Coulombic efficiency,
DOI: 10.6084/m9.figshare.22573459
title: A fluorinated cation introduces new interphasial chemistries to enable high-voltage lithium metal batteries

description: Capacity, Cycling data, Coulombic efficiency,
DOI: 10.6084/m9.figshare.22800908.v1
title: Cyclic di-AMP traps proton-coupled K<sup>+</sup> transporters of the KUP family in an inward-occluded conformation

description: Raw data of whole-cell K+ transport data and DSF measurements, detailed information provided in the according paper
DOI: 10.6084/m9.figshare.22800908
title: Cyclic di-AMP traps proton-coupled K<sup>+</sup> transporters of the KUP family in an inward-occluded conformation

description: Raw data of whole-cell K+ transport data and DSF measurements, detailed information provided in the according paper
DOI: 10.6084/m9.figshare.22637779.v1
title: Genome analyses reveal population structure and a purple stigma color candidate gene in finger millet

description: Supplementary Information (contains Supplementary Notes 1-4, Supplementary Figures 1-15 and Supplementary Tables 1-14), Supplementary Data files 1-13, and Source Data files 1-3.
DOI: 10.6084/m9.figshare.22637779
title: Genome analyses reveal population structure and a purple stigma color candidate gene in finger millet

description: Supplementary Information (contains Supplementary Notes 1-4, Supplementary Figures 1-15 and Supplementary Tables 1-14), Supplementary Data files 1-13, and Source Data files 1-3.
DOI: 10.6084/m9.figshare.22814426.v1
title: Antibody-based binding domain fused to TCRγ chain facilitates T cell cytotoxicity for potent anti-tumor response

description: Supplementary table and figures
DOI: 10.6084/m9.figshare.22814426
title: Antibody-based binding domain fused to TCRγ chain facilitates T cell cytotoxicity for potent anti-tumor response

description: Supplementary table and figures
DOI: 10.5517/ccdc.csd.cc24c9wq
title: CCDC 1977083: Experimental Crystal Structure Determination

description: Related Article: changpeng chen|2020|CSD Communication|||
description: Related Article: Changpeng Chen, Zhijun Wang, Sha Wang, Liang Xu, Xiaoming Zeng|2023|Org.Lett.|25|4241|doi:10.1021/acs.orglett.3c01156
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dd9lq
title: CCDC 2216363: Experimental Crystal Structure Determination

description: Related Article: Maxim V. Andreev, Iuliia A. Akishkina, Vyacheslav S. Bogdanov, Rinat R. Aysin, Fedor M. Dolgushin, Vladimir V. Burlakov|2023|Organometallics|42|1115|doi:10.1021/acs.organomet.2c00575
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dd9mr
title: CCDC 2216364: Experimental Crystal Structure Determination

description: Related Article: Maxim V. Andreev, Iuliia A. Akishkina, Vyacheslav S. Bogdanov, Rinat R. Aysin, Fedor M. Dolgushin, Vladimir V. Burlakov|2023|Organometallics|42|1115|doi:10.1021/acs.organomet.2c00575
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.3695590
title: CaLiGraph - A Large-Scale Semantic Knowledge Graph compiled from Wikipedia Categories and List Pages

description: CaLiGraph is a large-scale semantic knowledge graph with a rich ontology which is compiled from the DBpedia ontology, and Wikipedia categories & list pages. For more information, visit http://caligraph.org Information about uploaded files:<br> (all files are b-zipped and in the n-triple format)<br> <br> caligraph-metadata.nt.bz2<br> Metadata about the dataset which is described using void vocabulary. caligraph-ontology.nt.bz2<br> Class definitions, property definitions, restrictions, and labels of the CaLiGraph ontology. caligraph-ontology_dbpedia-mapping.nt.bz2<br> Mapping of classes and properties to the DBpedia ontology. caligraph-ontology_provenance.nt.bz2<br> Provenance information about classes (i.e. which Wikipedia category or list page has been used to create this class). caligraph-instances_types.nt.bz2<br> Definition of instances and (non-transitive) types. caligraph-instances_transitive-types.nt.bz2<br> Transitive types for instances (can also be induced by a reasoner). caligraph-instances_labels.nt.bz2<br> Labels for instances. caligraph-instances_relations.nt.bz2<br> Relations between instances derived from the class restrictions of the ontology (can also be induced by a reasoner). caligraph-instances_dbpedia-mapping.nt.bz2<br> Mapping of instances to respective DBpedia instances. caligraph-instances_provenance.nt.bz2<br> Provenance information about instances (e.g. if the instance has been extracted from a Wikipedia list page). dbpedia_caligraph-instances.nt.bz2<br> Additional instances of CaLiGraph that are not in DBpedia.<br> ! This file is no part of CaLiGraph but should rather be used as an extension to DBpedia. The triples use the DBpedia namespace and can thus be used to directly extend DBpedia. ! dbpedia_caligraph-types.nt.bz2<br> Additional types of CaLiGraph that are not in DBpedia.<br> ! This file is no part of CaLiGraph but should rather be used as an extension to DBpedia. The triples use the DBpedia namespace and can thus be used to directly extend DBpedia. ! dbpedia_caligraph-relations.nt.bz2<br> Additional relations of CaLiGraph that are not in DBpedia.<br> ! This file is no part of CaLiGraph but should rather be used as an extension to DBpedia. The triples use the DBpedia namespace and can thus be used to directly extend DBpedia. ! <strong>Changelog</strong> v1.0.7 Mappings from CaLiGraph classes to DBpedia classes are now realised via rdfs:subClassOf instead of owl:equivalentClass Entities are now URL-encoded to improve accessibility v1.0.6 Fixed a bug in the ontology creation step that led to a substantially lower amount of sub-type relationships than actually exist. The new version provides a richer type hierarchy that also leads to an increased amount of types for resources. v1.0.5 Fixed a bug that has declared CaLiGraph predicates as subclasses of owl:Predicate instead of being of the type owl:Predicate.