cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15131/shef.data.26977528
title: DRAM Latency-PUF Responses and corresponding PUF Phenotype conversions: Temperature and Voltage environmentally tested

description: DRAM-Latency-PUF raw response and Grayscale image 'PUF Phenotype' data from five Commodity-Off-The-Shelf (COTS) DDR3 DRAM DIMMs under various environmental conditions.Each measurement is categorised by the following: - DIMM Name - Location on DIMM (a, b, c, d, e, f, g, h) - Temperature (20C, 30C, 40C, 50C) - Voltage (1.3v, 1.5v) - Challenge Pattern (0x00, 0x55, 0xFF) - Measurement number (1 -&gt; 10)latency_dataset.csv contains each the above meta-data and each individual response measurement as a row in the table, including the raw hex output from the memory controller for formatting however you see fit.<br>grayscale_images contains each measurement represented as a 200x220 grayscale image for use training computer vision models.Finally included are the specific sets of Phenotype images used for the experimental work in [1], which are derived from the raw set, but can be utilised directly when using the shared experimental code for reproducability. This data can be utilised with the code repository found using the following DOI: 10.15131/shef.data.27094222<br>This is the data produced and utilised in Chapter 3 of the PhD Thesis 'Leveraging DRAM-based Physically Unclonable Functions for Enhancing Authentication in Resource-Constrained Applications' by Owen Millwood (also in publication [1]). [1] O. Millwood, J. Miskelly, B. Yang, P. Gope, E. B. Kavun and C. Lin, "PUF-Phenotype: A Robust and Noise-Resilient Approach to Aid Group-Based Authentication With DRAM-PUFs Using Machine Learning," in IEEE Transactions on Information Forensics and Security, vol. 18, pp. 2451-2465, 2023, doi: 10.1109/TIFS.2023.3266624.
DOI: 10.15131/shef.data.26977279
title: Simulated 16 & 32 stage Normal, Feed-Forward and XOR Arbiter PUF CRPs

description: Included are in both .txt and .csv format the data generated from the simulated 16 and 32 stage Arbiter PUFs (Normal APUF, Feed-Forward APUF and XOR APUF) used to to perform the experimental work in Chapter 4 of the PhD Thesis 'Leveraging DRAM-based Physically Unclonable Functions for Enhancing Authentication in Resource-Constrained Applications' by Owen Millwood (also in publication [1]). C_Origin provides the initial set of challenges input to the scheme, Output gives the two (for 16 stage) and four (for 32 stage) bit outputs.This dataset is compatible with the code found using the following DOI: 10.15131/shef.data.27095215[1] O. Millwood, M. K. Pehlivanoğlu, A. Mohammadi Pasikhani, J. Miskelly, P. Gope and E. B. Kavun, "A Generic Obfuscation Framework for Preventing ML-Attacks on Strong-PUFs through Exploitation of DRAM-PUFs," 2023 IEEE 8th European Symposium on Security and Privacy (EuroS&P), Delft, Netherlands, 2023, pp. 92-106, doi: 10.1109/EuroSP57164.2023.00015.
DOI: 10.6084/m9.figshare.27058645
title: Mitochondrial IFC NAO TMRM

description: Imaging Flow Cytometry results for the NAO TMRM staining. Both raw data files (.rif) and compensated data files (.cif) are provided. File names and corresponding diseases can be found in the excel sheet attached to the data: File Names and Corresponding Genes NAO TMRM Experiments 24-09-2024.xlsx.
DOI: 10.15468/dl.q48rna
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhacophorus cyanopunctatus Manthey & Steiof, 1998"
 ]
}

 The dataset includes 77 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029846-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15131/shef.data.26977237
title: Semi-Honest Verifier Generic PUF Obfuscation Scheme ML CRP Dataset

description: Includes PUF Obfuscation datasets for 16 and 32 bit Arbiter PUFs. This which will allow you to recreate/modify the experimental work undertaken in Chapter 5 of the PhD thesis 'Leveraging DRAM-based Physically Unclonable Functions for Enhancing Authentication in Resource-Constrained Applications' by Owen Millwood (and the key publication [1]).These are each .csv files containing the initial challenges and final responses given as input and recived as output by a simulation of the obfuscation scheme.The dataset compatible with this code can be found using the following DOI: 10.15131/shef.data.27095617[1] O. Millwood et al., "A Privacy-Preserving Protocol Level Approach to Prevent Machine Learning Modelling Attacks on PUFs in the Presence of Semi-Honest Verifiers," 2023 IEEE International Symposium on Hardware Oriented Security and Trust (HOST), San Jose, CA, USA, 2023, pp. 326-336, doi: 10.1109/HOST55118.2023.10133804.
DOI: 10.15468/dl.avquu2
title: Occurrence Download

description: A dataset containing 61537 records in GBIF matching the query:

SELECT 
 GBIF_MGRSCode(
 100000, 
 decimalLatitude,
 decimalLongitude,
 0 
 ) AS mgrs,
 COUNT(DISTINCT speciesKey) AS unique_species_count
FROM
 occurrence
GROUP BY
 mgrs


 The dataset's 61537 records were derived from 76553 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029823-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vhr45e
title: Occurrence Download

description: A dataset containing 577 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Banco de Germoplasma Vegetal del Jardín Botánico de Olarizu (Vitoria-Gasteiz)/Olarizuko Lorategi Botanikoaren Landare Germoplasma Bankua (Vitoria-Gasteiz)"
 ]
}

 The dataset includes 577 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029847-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27100819
title: FMDV activated glycolysis and hijacked HK2 to inhibit innate immunity and promote viral replication

description: FMD seriously restricts the healthy development of global animal husbandry, and the unclear pathogenic mechanism of FMDV leads to the difficulty of FMD prevention and purification. Glycolytic remodeling is considered as one of the hallmarks of viral infection, providing energy and precursors for viral assembly and replication. In this paper, the interaction and mechanism between FMDV and glycolysis were explored from the perspective of immune metabolism. We found that FMDV infection caused increased extracellular acidification rate, lactic acid accumulation, and high levels of HK2. In addition, during FMDV infection, HK2 enhanced glycolytic activity and mediates autophagy degradation of IRF3/7 to antagonize the innate immune response, thereby promoting viral replication. Our findings provide evidence supporting that FMDV is closely correlated with host metabolism, enriching the understanding that glycolysis and HK2 assist virus infection, and provide new ideas for further elucidating the pathogenic mechanism of FMDV.
DOI: 10.15468/dl.29rqjq
title: Occurrence Download

description: A dataset containing 180 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhacophorus chenfui Liu, 1945"
 ]
}

 The dataset includes 180 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029848-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gzx278
title: Occurrence Download

description: A dataset containing 557 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendropsophus minusculus (Rivero, 1971)"
 ]
}

 The dataset includes 557 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029849-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bf9j9m
title: Occurrence Download

description: A dataset containing 67 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhacophorus burmanus (Andersson, 1939)"
 ]
}

 The dataset includes 67 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029851-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pd8fmv
title: Occurrence Download

description: A dataset containing 8124 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendropsophus minutus (Peters, 1872)"
 ]
}

 The dataset includes 8124 records from 128 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029852-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v94d8n
title: Occurrence Download

description: A dataset containing 23562 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Arctic Species Trend Index (ASTI) : Marine"
 ]
}

 The dataset includes 23562 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029853-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8wankj
title: Occurrence Download

description: A dataset containing 20664 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Arctic Species Trend Index (ASTI) : Terrestrial",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 20664 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029854-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xxw4et
title: Occurrence Download

description: A dataset containing 448 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhacophorus bipunctatus Ahl, 1927"
 ]
}

 The dataset includes 448 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029855-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kb2ruv
title: Occurrence Download

description: A dataset containing 3382 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Crataegus pinnatifida Bunge"
 ]
}

 The dataset includes 3382 records from 121 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029856-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.a9xkss
title: Occurrence Download

description: A dataset containing 332 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "OccurrenceStatus is Present",
 "TaxonKey is Equus kiang Moorcroft, 1841",
 "Year is greater than or equal to 1924"
 ]
}

 The dataset includes 332 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029857-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cvj9es
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendropsophus nahdereri (Lutz & Bokermann, 1963)"
 ]
}

 The dataset includes 28 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029859-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.32938h
title: Occurrence Download

description: A dataset containing 2485423 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Australia",
 "Geometry POLYGON((144.80732 -37.96775,145.06465 -38.00039,145.13311 -37.71196,144.74655 -37.69308,144.80732 -37.96775))",
 "HasCoordinate is true",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 2485423 records from 170 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029850-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6073/pasta/99c883ee28987ac32a98d621c7ec3bb6
title: Continuous Measurement of Canopy Fluorescence at Harvard Forest 2013-2014

description: Vegetation fluorescence, a very small amount of radiation emitted as a byproduct of photosynthesis, is a direct indicator of plant physiology. Monitoring the solar-induced plant fluorescence provides a powerful tool to understand how the plant photosynthesis responds to environmental factors such as solar radiation, temperature and precipitation as well as to stress and disturbance. We installed the ground-based fluorescence observation system to explore the Franhofer lines in the solar spectrum to monitor the canopy fluorescence. Fluorescence data could also be used to link with eddy covariance data in flux towers, the digital camera data and solar radiation data, providing a good supplementary to numerous data collected at Harvard Forest.
DOI: 10.5281/zenodo.11557468
title: Raw plethysmography data for Figure 5_7% CO2 protocol

description: This dataset contains all original LabChart recordings for the plethysmography experiments in Figure 5 and its supplement in the Manuscript "Vglut2-based glutamatergic signaling in central noradrenergic neurons is dispensable for normal breathing and chemosensory reflexes". It also includes the metadata file and the setting files used for data analysis with Breathe Easy software.
DOI: 10.5281/zenodo.12582356
title: Cross Spatio-Temporal Pathology-based Lung Nodule Dataset

description: We introduce a novel cross spatio-temporal lung nodule dataset based on pathological information, which effectively integrates rich multimodal information within the spatio-temporal dimension.
DOI: 10.5281/zenodo.6586859
title: Raw and aggregated data for the study introduced in the paper "The way we cite: common metadata used across disciplines for defining bibliographic references"

description: These data have been gathered in the context of a study aiming to investigate citation practices for referencing different types of entities and, in particular, for understanding the most used metadata in bibliographic references. The data are stored in two documents in XLSX format: file "links-intext-pointers-and-cited-entity-types.xlsx" - it contains information about whether the in-text reference pointers of the various PDF articles of the corpus have specified hypertextual links from the in-text reference pointers to the denoted bibliographic reference, plus information about the types of all the entities cited by each article in the corpus; file "metadata-bibliographic-references.xlsm" - it contains information about the metadata used to identify the various descriptive elements of all the bibliographic references defined in the article of the corpus. The methodology used to gather all these data is described in: Santos, E. A. d., Peroni, S., Mucheroni, M. L.: Workflow for retrieving all the data of the analysis introduced in the article "Citing and referencing habits in Medicine and Social Sciences journals in 2019". (2020), https://doi.org/10.17504/protocols.io.bbifikbn
DOI: 10.5281/zenodo.7125956
title: An eye tracking dataset for building façade inspection

description: This dataset contains eye-tracking data of ten participants (students) for building facade inspection of two structures. The participants are in between their mid-twenties to thirties. The sessions were recorded for the preliminary eye tracking study to understand the inspector's reasoning and sense-making for damage assessment. The dataset was collected using Pro Glasses 3 wearable eye tracking system from Tobii Technology and further post-processing was done using Pro Lab software for data analysis purposes.
DOI: 10.5281/zenodo.8414910
title: Data for 'Grain boundary segregation and phase separation in ceria-zirconia from atomistic simulation'

description: Data for the article 'Grain boundary segregation and phase separation in ceria-zirconia from atomistic simulation', including input and output files for simulations, and scripts to perform data analysis and generate figures.
DOI: 10.34740/kaggle/dsv/8812289
title: Cross Spatio-Temporal Lung Nodule Dataset
DOI: 10.5281/zenodo.12583615
title: Global Physically-Constrained Deep Learning Water Cycle Model with Vegetation: Model Simulations

description: Welcome to our repository, which features simulations from the Hybrid Hydrological Model with Vegetation (H2MV). This collection includes 11 NetCDF files, representing temporal model simulations on a monthly scale and the static output of maximum soil moisture capacity (also known as plant rooting water storage) derived from a 10-fold cross-validation (CV) setup:



Temporal Simulations: The files named "fold1.nc" through "fold10.nc" contain the temporal model simulations, aggregated to a monthly scale, from 10 fold cross-validation (CV) setup.

Static Output: The "sm_max.nc" file presents the H2MV's estimation of the maximum soil moisture capacity


Contents of the Temporal Simulation Files

Each of the "fold" files ("fold1.nc" to "fold10.nc") contains the following variables:



Snow Dynamics



snow_acc: Snow accumulation (mm/day)

snow_melt: Snow melt (mm/day)

swe: Snow water equivalent (mm)



Evapotranspiration and its components



Ei: Interception evaporation (mm/day)

Es: Soil evaporation (mm/day)

T: Transpiration (mm/day)

ET: Evapotranspiration (mm/day)



Recharge



r_soil: Soil recharge (mm/day)

r_gw: Groundwater recharge (mm/day)



Runoff



runoff_surface: Surface runoff (mm/day)

baseflow: Baseflow (mm/day)

runoff_total: Total runoff (mm/day)



Water Storages 



GW: Groundwater (mm)

SM: Soil moisture (mm)

tws: Terrestrial water storage (mm)

tws_anomaly: Anomalies of terrestrial water storage (mm)



Vegetation



fapar: Fraction of absorbed photosynthetically active radiation (-)




Contents of the Static Output File

The "sm_max.nc" file contains 10 variables corresponding to the 10 folds of CV, with each variable (e.g., "fold1") referring to the respective fold.

Additional Information

It's important to note that the original model simulations were conducted with a daily temporal resolution, but the data shared here have been aggregated to a monthly scale. We are open to sharing the original daily simulations and additional variables not included in this repository upon request. Please feel free to reach out to us for more information or data requests.
DOI: 10.15151/esrf-dc-1801440672
title: Anomalous datacollection of guanidinase from Nitrospira inopinata

description: Raw experimental data for Guanidinase (GdmH) from Nitrospira inopinata at the peak of the Mn or Ni anomalous signal, as measured by X-ray fluorescence scanning on ID30B, for characterization of active site metal content.
DOI: 10.25984/1824861
title: Data Sets for Evaluation of Building Fault Detection and Diagnostics Algorithms

description: This documentation and dataset can be used to test the performance of automated fault detection and diagnostics algorithms for buildings. The dataset was created by LBNL, PNNL, NREL, ORNL and ASHRAE RP-1312 (Drexel University). It includes data for air-handling units and rooftop units simulated with PNNL's large office building model.
DOI: 10.3886/icpsr24801.v1
title: Uniform Crime Reports [United States]: Supplementary Homicide Reports With Multiple Imputation, Cumulative Files 1976-2007
title: Version 1

description: These data provide incident-level information on criminal homicides including location, circumstances, and method of offense, as well as demographic characteristics of victims and perpetrators and the relationship between the two. To adjust for unit missingness, a multiple imputation approach and a weighting scheme were adopted, resulting in a fully-imputed SHR cumulative database of criminal homicides for the years 1976-2007. Unlike other versions of the SHR files, these are limited to incidents of murder and non-negligent manslaughter, excluding justifiable homicides, negligent manslaughter and homicides related to the September 11, 2001, terrorist attacks.
description: Datasets: DS0: Study-Level Files DS1: Offender Data DS2: Victim Data
description: Murder and non-negligent manslaughter incidents in the United States from January 1976 through December 2007.
DOI: 10.5521/forestplots.net/2014_1
title: Amazon forest biomass measured in inventory plots. Plot Data from "Markedly divergent estimates of Amazon forest carbon density from ground plots and satellites."

description: Abstract
Abstract
Aim
The accurate mapping of forest carbon stocks is essential for understanding the global carbon cycle, for assessing emissions from deforestation, and for rational land-use planning. Remote sensing (RS) is currently the key tool for this purpose, but RS does not estimate vegetation biomass directly, and thus may miss significant spatial variations in forest structure. We test the stated accuracy of pantropical carbon maps using a large independent field dataset.
Location
Tropical forests of the Amazon basin. The permanent archive of the field plot data can be accessed at: http://dx.doi.org/10.5521/FORESTPLOTS.NET/2014_1
Methods
Two recent pantropical RS maps of vegetation carbon are compared to a unique ground-plot dataset, involving tree measurements in 413 large inventory plots located in nine countries. The RS maps were compared directly to field plots, and kriging of the field data was used to allow area-based comparisons.
Results
The two RS carbon maps fail to capture the main gradient in Amazon forest carbon detected using 413 ground plots, from the densely wooded tall forests of the north-east, to the light-wooded, shorter forests of the south-west. The differences between plots and RS maps far exceed the uncertainties given in these studies, with whole regions over- or under-estimated by more than 25%, whereas regional uncertainties for the maps were reported to be less than 5%.

Main conclusions
Pantropical biomass maps are widely used by governments and by projects aiming to reduce deforestation using carbon offsets, but may have significant regional biases. Carbon-mapping techniques must be revised to account for the known ecological variation in tree wood density and allometry to create maps suitable for carbon accounting. The use of single relationships between tree canopy height and above-ground biomass inevitably yields large, spatially correlated errors. This presents a significant challenge to both the forest conservation and remote sensing communities, because neither wood density nor species assemblages can be reliably mapped from space.
DOI: 10.5281/zenodo.12576633
title: Cross Spatio-Temporal Pathology-based Lung Nodule Dataset

description: We introduce a novel cross spatio-temporal lung nodule dataset based on pathological information, which effectively integrates rich multimodal information within the spatio-temporal dimension.
DOI: 10.5281/zenodo.10727572
title: Holo-Calmodulin interacting with membranes with extra CaCl2 in the environment