cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25345/c5kw57t9n
title: MassIVE MSV000092065 - DOT1L enables Activation Induced Deaminase activity genome-wide by limiting RNAPII promoter proximal pause release
title: Activation induced deaminase (AID) initiates class switch recombination (CSR) and somatic hypermutation of the antibody genes but also mutates other genes, with oncogenic consequences, as a side effect. It is important to understand the mechanisms that render the antibody genes and off-target genomic loci susceptible to AID. We identify the H3K79 histone methyltransferase DOT1L as nuclear AID-proximal factor required for CSR, as well as off-target AID activity, including IgH-cMyc translocations. Mechanistically, we find that DOT1L activity restricts transcriptional pause release, as evidenced by reduced promoter-proximal RNA polymerase II (RNAPII) and increased RNAPII Serine 2 phosphorylation into the gene bodies of all H3K79-modified genes. Additional evidence suggests that widespread pause release results in abnormal transcription elongation, which can explain the variable effect of DOT1L-deficiency on H3K79-methylated gene transcript levels, depending on their original transcriptional activity and gene length. Thus, we propose that DOT1L limits transcriptional pause release, which enables AID activity genome-wide.
DOI: 10.5281/zenodo.7869418
title: Signal and background samples for Higgs boson decays to four b-jets

description: Data samples used in the paper <em>Illuminating all-hadronic final states with a photon: Exotic decays of the Higgs boson to four bottom quarks in vector boson fusion plus gamma at hadron colliders.</em> Included are analysis ntuples for the produced background samples and 4 signal samples: VBF with and without a photon for H--&gt;aa--&gt;4b for m_a = 50 GeV and m_a = 25 GeV. Analysis ntuples include only events with 6 total jets (4b final state) or 5 total jets (3b final state). Variables included are 4-vectors for the 2 jets with the highest invariant mass (VBF jets), weighting variables used in the analysis and described in the paper, leading photon 4-vector, and final state (4b/3b) invariant masses and jet separation variables used in analysis and further described in the paper. Samples are simulated using MadGraph5 version 2.7.3, Pythia8, and Delphes. Further details about sample simulation can be found in the paper.
DOI: 10.5281/zenodo.7869417
title: Signal and background samples for Higgs boson decays to four b-jets

description: Data samples used in the paper <em>Illuminating all-hadronic final states with a photon: Exotic decays of the Higgs boson to four bottom quarks in vector boson fusion plus gamma at hadron colliders.</em> Included are analysis ntuples for the produced background samples and 4 signal samples: VBF with and without a photon for H--&gt;aa--&gt;4b for m_a = 50 GeV and m_a = 25 GeV. Analysis ntuples include only events with 6 total jets (4b final state) or 5 total jets (3b final state). Variables included are 4-vectors for the 2 jets with the highest invariant mass (VBF jets), weighting variables used in the analysis and described in the paper, leading photon 4-vector, and final state (4b/3b) invariant masses and jet separation variables used in analysis and further described in the paper. Samples are simulated using MadGraph5 version 2.7.3, Pythia8, and Delphes. Further details about sample simulation can be found in the paper.
DOI: 10.18434/t4/1500024
title: U.S. population data for human identification markers

description: This information and data are supplemental files associated with: Gettings,
            K.B., Borsuk, L.A., Steffen, C.R., Kiesler, K.M., and P.M.Vallone. Sequence-based U.S.
            population data for 27 autosomal STR loci, Forensic Science International Genetics
            (submitted for publication). The primary data consists of sequence-based allele
            frequencies for N=1036 anonymized U.S. population samples at 27 autosomal Short Tandem
            Repeat (auSTR) loci: D1S1656, TPOX, D2S441, D2S1338, D3S1358, D4S2408, FGA, D5S818,
            CSF1PO, D6S1043, D7S820, D8S1179, D9S1122, D10S1248, TH01, vWA, D12S391, D13S317, Penta
            E, D16S539, D17S1301, D18S51, D19S433, D20S482, D21S11, Penta D, and D22S1045. This
            information is expected to support the implementation of sequence-based STR analysis in
            forensic applications. "NIST1036_auSTR_Seq_SuppTables.xls" is an excel file containing
            the following worksheets: run metrics for the 42 sequencing runs performed to generate
            the allele frequency data (Supp Table 1 - Run Metrics); coverage per locus per sample
            for all N=1036 at the 27auSTR, 7XSTR, and 24 YSTR loci reported by the manufacturer in
            this assay (Supp Table 2 - Coverage); allele frequency data (Supp Table 3 -
            Frequencies); GRCh38 reference coordinates for genomic regions reported in the 27 auSTRs
            (Supp Table 4 - Ref Coordinates); summary of polymorphisms detected and reported in STR
            flanking regions (Supp Table 5 - Flank Polymorph); number of alleles, expected and
            observed heterozygosity, and p-values associated with HWE testing by population for the
            27 auSTR loci (Supp Table 6 - Hexp_Hobs_pHW); p-values associated with testing for
            linkage disequilibrium (Supp Table 7 - LD p-values); and pairwise Fst values by
            population for the 27 auSTR loci (Supp Table 8 - Pairwise Fst). Lastly,
            "NIST1036_auSTR_Seq_SuppFile1.pdf" contains information on optimization, sequencing, and
            quality control of the data.
DOI: 10.5281/zenodo.7991559
title: Conserved and cell type-specific transcriptional responses to IFN-γ in the ventral midbrain

description: FISH image quantification and pSTAT1-Y701 analysis of fig.4
DOI: 10.5281/zenodo.7991560
title: Conserved and cell type-specific transcriptional responses to IFN-γ in the ventral midbrain

description: FISH image quantification and pSTAT1-Y701 analysis of fig.4
DOI: 10.58153/bqeba-3z677
title: Egress Behavior from Select NYC COVID-19 Exposed Health Facilities March-May 2020

description: This rapid response surveillance project was funded by the National Science Foundation (NSF) to collect "perishable" data on egress behaviors and neighborhood conditions surrounding healthcare centers (HCCs) in New York City (NYC) during the initial NYC COVID-19 PAUSE ordinance from March 22nd to May 19th, 2020.  Anonymized data on NYC HCC egress behaviors were collected by observational field workers using a phone-based mapping application.  Each egress trip record includes the day of week, time of day, destination category type, along with an array of behavioral outcome categories, ambient weather conditions and socio-economic factors.  Egress trajectories with precise estimates of distance traveled and the spatial dispersion or "spread" around each HCC were added via post-processing.  The data collection and cleaning process resulted in 5,030 individual egress records from 18 facilities.
DOI: 10.25345/c5g44j14r
title: MassIVE MSV000092066 - DSSO Crosslinking of T7 Bacteriophage
title: The following experiment was performed in duplicate. For each sample, approximately 130 ug of phage T7 was brought to a final concentration of 8.7 mM DSSO by adding fresh stock (26 mM DSSO in anhydrous DMSO). The reaction mixture was incubated at room temperature for 1 hour and quenched by adding equal parts of 5 mM Tris HCl pH = 8.0 to a final concentration of 2.5 mM Tris. During concentration and buffer exchange with a 3kDa filter (Millipore Sigma UFC500396), the sample was brought to a final volume of 50 ul in 5 mM Tris HCl pH = 8.0. The proteins were reduced, alkylated, digested with trypsin, and desalted using C18 spin tips (Thermo Scientific HyperSep SpinTip 60109-412), as described in McCafferty et al,. 2022.
DOI: 10.34740/kaggle/dsv/5820704
title: Balochi Language to English Translation Dataset
DOI: 10.25505/fiz.icsd.cc2g2ry8
title: CSD 2266780: Experimental Crystal Structure Determination

description: Related Article: Meriem Goudjil|2023|ICSD Communication|||
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.3886/e192043
title: Exploring Gender Differences in Leadership Aspirations: A Four-Year Longitudinal Study of College Students from Adverse Backgrounds

description: The gender disparity in leadership positions is substantial and critical, yet persists despite decades of focused study. Critical developmental periods, such as emerging adulthood, may be particularly relevant to attend to if we hope to find effective interventions to tackle this problem. The present study draws on longitudinal data covering four years of college among a socio-demographically and nationally diverse sample of college students with adverse backgrounds (N=404) who enrolled at one of 182 four-year colleges or universities across the US. Results indicate that female students enter college with significantly lower levels of leadership aspirations than their male counterparts. Once in college, despite greater likelihoods of participating in activities conceptualized as “leadership learning experiences,” female disadvantages persist. Overall, development experiences over four years of college had no discernable effect on gender disparities in leadership aspirations. Implications for research and practice are discussed.
description: All 2017 Horatio Alger Association Scholarship recipients were invited to participate in the study, representing individuals throughout the U.S. who were graduating high school seniors in spring 2017. Invitations to complete a survey at the beginning of the first year of college (fall 2017) were sent to all cohort members who provided consent to participate. Subsequent follow-up surveys (fall 2018, spring 2020, spring 2021) were administered to all individuals who completed the initial fall 2017 survey, regardless of enrollment status or any other criteria. .
DOI: 10.3886/e192043v1
title: Exploring Gender Differences in Leadership Aspirations: A Four-Year Longitudinal Study of College Students from Adverse Backgrounds

description: The gender disparity in leadership positions is substantial and critical, yet persists despite decades of focused study. Critical developmental periods, such as emerging adulthood, may be particularly relevant to attend to if we hope to find effective interventions to tackle this problem. The present study draws on longitudinal data covering four years of college among a socio-demographically and nationally diverse sample of college students with adverse backgrounds (N=404) who enrolled at one of 182 four-year colleges or universities across the US. Results indicate that female students enter college with significantly lower levels of leadership aspirations than their male counterparts. Once in college, despite greater likelihoods of participating in activities conceptualized as “leadership learning experiences,” female disadvantages persist. Overall, development experiences over four years of college had no discernable effect on gender disparities in leadership aspirations. Implications for research and practice are discussed.
description: All 2017 Horatio Alger Association Scholarship recipients were invited to participate in the study, representing individuals throughout the U.S. who were graduating high school seniors in spring 2017. Invitations to complete a survey at the beginning of the first year of college (fall 2017) were sent to all cohort members who provided consent to participate. Subsequent follow-up surveys (fall 2018, spring 2020, spring 2021) were administered to all individuals who completed the initial fall 2017 survey, regardless of enrollment status or any other criteria. .
DOI: 10.3886/e192043v2
title: Exploring Gender Differences in Leadership Aspirations: A Four-Year Longitudinal Study of College Students from Adverse Backgrounds

description: The gender disparity in leadership positions is substantial and critical, yet persists despite decades of focused study. Critical developmental periods, such as emerging adulthood, may be particularly relevant to attend to if we hope to find effective interventions to tackle this problem. The present study draws on longitudinal data covering four years of college among a socio-demographically and nationally diverse sample of college students with adverse backgrounds (N=404) who enrolled at one of 182 four-year colleges or universities across the US. Results indicate that female students enter college with significantly lower levels of leadership aspirations than their male counterparts. Once in college, despite greater likelihoods of participating in activities conceptualized as “leadership learning experiences,” female disadvantages persist. Overall, development experiences over four years of college had no discernable effect on gender disparities in leadership aspirations. Implications for research and practice are discussed.
description: All 2017 Horatio Alger Association Scholarship recipients were invited to participate in the study, representing individuals throughout the U.S. who were graduating high school seniors in spring 2017. Invitations to complete a survey at the beginning of the first year of college (fall 2017) were sent to all cohort members who provided consent to participate. Subsequent follow-up surveys (fall 2018, spring 2020, spring 2021) were administered to all individuals who completed the initial fall 2017 survey, regardless of enrollment status or any other criteria. .
DOI: 10.3886/e192043v3
title: Exploring Gender Differences in Leadership Aspirations: A Four-Year Longitudinal Study of College Students from Adverse Backgrounds

description: The gender disparity in leadership positions is substantial and critical, yet persists despite decades of focused study. Critical developmental periods, such as emerging adulthood, may be particularly relevant to attend to if we hope to find effective interventions to tackle this problem. The present study draws on longitudinal data covering four years of college among a socio-demographically and nationally diverse sample of college students with adverse backgrounds (N=404) who enrolled at one of 182 four-year colleges or universities across the US. Results indicate that female students enter college with significantly lower levels of leadership aspirations than their male counterparts. Once in college, despite greater likelihoods of participating in activities conceptualized as “leadership learning experiences,” female disadvantages persist. Overall, development experiences over four years of college had no discernable effect on gender disparities in leadership aspirations. Implications for research and practice are discussed.
description: All 2017 Horatio Alger Association Scholarship recipients were invited to participate in the study, representing individuals throughout the U.S. who were graduating high school seniors in spring 2017. Invitations to complete a survey at the beginning of the first year of college (fall 2017) were sent to all cohort members who provided consent to participate. Subsequent follow-up surveys (fall 2018, spring 2020, spring 2021) were administered to all individuals who completed the initial fall 2017 survey, regardless of enrollment status or any other criteria. .
DOI: 10.5281/zenodo.7992033
title: Precipitation nowcasting verification dataset

description: Verification files for the Verif program. See https://github.com/WFRT/verif for details.
DOI: 10.5281/zenodo.7992032
title: Precipitation nowcasting verification dataset

description: Verification files for the Verif program. See https://github.com/WFRT/verif for details.
DOI: 10.34943/8d5c4434-6421-40c5-b72e-f43285d50e5b
title: Baynes Sound Carbon Dioxide Sensor Deployed 2023-05-04

description: The Pro-Oceanus CO2-Pro CV (SN 36-323-75) was deployed on 2023-05-04 at Baynes Sound. Baynes Sound is located between Denman Island and Vancouver Island. This device is a Carbon Dioxide Sensor. Carbon Dioxide sensors monitor CO2 levels in the ocean. CO2 sensors measure the partial pressure, or the concentration of dissolved CO2 in seawater by a variety of techniques. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.6084/m9.figshare.23271841
title: R code for data analysis from Adaptive significance of affiliative behaviour differs between sexes in a wild reptile population

description: In recent years, we have begun to appreciate that social behaviours might exhibit repeatable among-individual variation. Such behavioural traits may even covary and have critical evolutionary implications. Importantly, some social behaviours such as aggressiveness have been shown to provide fitness benefits, including higher reproductive success and survival. However, fitness consequences of affiliative behaviours, especially between or among sexes, can be more challenging to establish. Using a longitudinal behavioural dataset (2014–2021) collected on eastern water dragons (<i>Intellagama lesueurii</i>), we investigated whether various aspects of affiliative behaviour (1) were repeatable across years, (2) covaried with each other at the among-individual level, and (3) influenced individuals' fitness. In particular, we considered affiliative behaviours towards opposite-sex and same-sex conspecifics separately. We found that social traits were repeatable and covaried with each other similarly for both sexes. More notably, we found that male reproductive success was positively correlated with the number of female associates and the proportion of time spent with females, while females’ reproductive success was not correlated with any of the measured social behaviour metrics. Overall, these findings suggest that selection may be acting differently on social behaviour of male and female eastern water dragons.
DOI: 10.6084/m9.figshare.23271841.v1
title: R code for data analysis from Adaptive significance of affiliative behaviour differs between sexes in a wild reptile population

description: In recent years, we have begun to appreciate that social behaviours might exhibit repeatable among-individual variation. Such behavioural traits may even covary and have critical evolutionary implications. Importantly, some social behaviours such as aggressiveness have been shown to provide fitness benefits, including higher reproductive success and survival. However, fitness consequences of affiliative behaviours, especially between or among sexes, can be more challenging to establish. Using a longitudinal behavioural dataset (2014–2021) collected on eastern water dragons (<i>Intellagama lesueurii</i>), we investigated whether various aspects of affiliative behaviour (1) were repeatable across years, (2) covaried with each other at the among-individual level, and (3) influenced individuals' fitness. In particular, we considered affiliative behaviours towards opposite-sex and same-sex conspecifics separately. We found that social traits were repeatable and covaried with each other similarly for both sexes. More notably, we found that male reproductive success was positively correlated with the number of female associates and the proportion of time spent with females, while females’ reproductive success was not correlated with any of the measured social behaviour metrics. Overall, these findings suggest that selection may be acting differently on social behaviour of male and female eastern water dragons.
DOI: 10.5281/zenodo.7992174
title: Data for "Integrated microcavity optomechanics with a suspended photonic crystal mirror above a distributed Bragg reflector"

description: Data used for figures in "Integrated microcavity optomechanics with a suspended photonic crystal mirror above a distributed Bragg reflector" Sushanth Kini Manjeshwar et.al (arXiv:2305.13511)
description: This work was supported by Chalmers' Area of Advance Nano, the Knut and Alice Wallenberg Foundation through a Wallenberg Academy Fellowship (W.W.) and the Wallenberg Center for Quantum Technology (WACQT, A.C.), the Swedish Research Council (VR projects No. 2018-05061 and 2019-04946), and the QuantERA project C'MON-QSENS! H.P. acknowledges funding by the European Union under the project MSCA-PF-2022-OCOMM. Samples were fabricated in the Myfab Nanofabrication Laboratory at Chalmers and analyzed in the Chalmers Materials Analysis Laboratory. Simulations were performed on resources provided by the National Academic Infrastructure for Supercomputing in Sweden (NAISS) and the Swedish National Infrastructure for Computing (SNIC) at Tetralith partially funded by the Swedish Research Council through grant agreements no. 2022-06725 and no. 2018-05973.
DOI: 10.5519/qd.5s2ngb12
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (8 records)
DOI: 10.25345/c5bc3t70m
title: MassIVE MSV000092067 - Chemical screening of interaction zones in P. expansum and M. fructigena co-cultures
title: The samples are part of an ongoing investigation on the role Pencillium expansum produced secondary metabolites for microbial community structure and development in apples. Co-cultures of P. expansum and M. fructigena were screened in order to profile the interaction zone between the two species.
DOI: 10.5281/zenodo.7992180
title: Didáctica y tecnología en la escuela digital de emergencia en Perú

description: Con el objetivo de explorar <strong> qué elementos didácticos de la escuela virtual de emergencia de Perú deberían mantenerse en la escuela presencial y cuáles deberían eliminarse</strong> se diseñó un cuestionario ad hoc con dos segmentos: I. Datos generales (edad, sexo, nivel, tipo de centro, años de servicio, zona, tipo de conexión a internet y dispositivo). II. Cuatro preguntas abiertas en torno a (1) Estrategias didácticas de digitalización que han funcionado en la educación de emergencia sanitaria y deberían instaurarse en la escuela presencial, (2) Estrategias didácticas en la educación de emergencia sanitaria con tecnología que deberían dejar de hacerse en la escuela presencial, (3) Innovaciones pedagógicas necesarias para mejorar la docencia con tecnología en una escuela presencial post Covid-19 y (4) Principales herramientas tecnológicas utilizadas durante la pandemia. El análisis de datos publicado se refieren a la parte II (cuatro preguntas abiertas) con un análisis cualitativo de la información procedente de 154 respuestas abiertas a las cuestiones. Para ello se ha realizado un análisis de contenido agrupando por categorías.