cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7503590.v3
title: Elucidating the chemical and biochemical applications of <i>Citrus sinensis</i>-mediated silver nanocrystal

description: Synthesis of nanoparticles using biodegradable source is safer and echo-friendly. Here, we describe the synthesis of polycrystalline silver nanocrystals using <i>Citrus sinensis</i> acting as both reducing and capping agents. After exposing the silver ions to orange extract, rapid reduction of silver ions led to the formation of stable silver nanocrystals due to the reducing and stabilizing properties of orange fruit juice. The synthesized silver nanocrystals were characterized using various analytical techniques like UV–vis spectroscopy, X-ray diffraction (XRD), dynamic light scattering (DLS), scanning electron microscope (SEM) and transmission electron microscopy (TEM). The biochemical activity of the synthesized nanocrystals was studied in the light of affinity to bovine serum albumin using several biophysical methods like absorbance, fluorescence and circular dichroism spectroscopy. Cytotoxic activity of these nanocrystals was also studied against Hep-2 cell line using fluorescence microscopy. It was also found that the synthesized nanocrystals can sense mercuric ion down to 50 µM in the presence of a number of cations. Furthermore, we established that the silver nanoparticles can effectively catalyse the reduction of methylene blue by ascorbic acid. The present study will enrich our knowledge on the chemical and biochemical activities of green-synthesized silver nanocrystals.
DOI: 10.7284/113397
title: TSG (Thermosalinograph) data collected during research cruise KN211-01 using a Sea-Bird SBE-45 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112073
title: Multiplexed data collected during research cruise KN211-02 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112072
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN211-02 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113403
title: Fluorometer data collected during research cruise KN211-02 using a WET Labs WETStar instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503548
title: Growth, photosynthetic activity and tuber quality of two potato cultivars in controlled environment as affected by light source

description: In order to elucidate the effect of genetic material and light source and their interaction on plant performance of potato (<i>Solanum tuberosum</i> L.), we studied the influence of two light sources, white fluorescent tubes (WF) and red blue LEDs with ratio 8:1 (RB) and two cultivars, ‘Avanti’ and ‘Colomba’ grown in phytotron, on growth, leaf photosynthesis and photochemistry and tuber quality. Under WF, net photosynthesis (NP) increased from the vegetative phase until flowering, then decreased during tuber bulking, with no differences between the cultivars. Lighting with RB increased the NP and the PSII maximum quantum use efficiency compared to WF. RB reduced stem elongation in both cultivars, as well as the number and area of leaves, and the aerial biomass per plant in ‘Colomba’, compared to WF. Conversely, tuber yield was higher in plants under RB light in both ‘Avanti’ and ‘Colomba’. Light source did not influence the tuber content of starch and total glycoalkaloids, while it affected differently in the cultivars the protein content and the glycoalkaloid profile. Our results highlight how interactions between light source and genotype need to be considered for potato cultivation in controlled environment under artificial lighting.
DOI: 10.6084/m9.figshare.7503548.v1
title: Growth, photosynthetic activity and tuber quality of two potato cultivars in controlled environment as affected by light source

description: In order to elucidate the effect of genetic material and light source and their interaction on plant performance of potato (<i>Solanum tuberosum</i> L.), we studied the influence of two light sources, white fluorescent tubes (WF) and red blue LEDs with ratio 8:1 (RB) and two cultivars, ‘Avanti’ and ‘Colomba’ grown in phytotron, on growth, leaf photosynthesis and photochemistry and tuber quality. Under WF, net photosynthesis (NP) increased from the vegetative phase until flowering, then decreased during tuber bulking, with no differences between the cultivars. Lighting with RB increased the NP and the PSII maximum quantum use efficiency compared to WF. RB reduced stem elongation in both cultivars, as well as the number and area of leaves, and the aerial biomass per plant in ‘Colomba’, compared to WF. Conversely, tuber yield was higher in plants under RB light in both ‘Avanti’ and ‘Colomba’. Light source did not influence the tuber content of starch and total glycoalkaloids, while it affected differently in the cultivars the protein content and the glycoalkaloid profile. Our results highlight how interactions between light source and genotype need to be considered for potato cultivation in controlled environment under artificial lighting.
DOI: 10.7284/112074
title: GNSS (Global Navigation Satellite System) data collected during research cruise KN211-02 using a C&C C-Nav 2000 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113402
title: Meteorological Station data collected during research cruise KN211-02 using a Vaisala WXT520 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113405
title: Meteorological Station data collected during research cruise KN211-02 using a Vaisala WXT520 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113406
title: Radiometer data collected during research cruise KN211-02 using a Eppley PIR instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113407
title: Radiometer data collected during research cruise KN211-02 using a Eppley PSP instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503482
title: MOESM2 of Proteomic analysis of serum proteins from HIV/AIDS patients with Talaromyces marneffei infection by TMT labeling-based quantitative proteomics

description: Additional file 2. Protein list detected by LCâ MS/MS. (Table S1, sheet 1) at least 1.5-fold up-or downregulated and (Table S2, sheet 2) total.
DOI: 10.7284/113408
title: Water Temperature data collected during research cruise KN211-02 using a Sea-Bird SBE-48 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503479
title: Additional file 3: of Biological clock function is linked to proactive and reactive personality types

description: Table S1. Differently expressed genes in early emerging (EE) and late emerging (LE) fish. Analysis of the EE and LE transcriptome data show that 1478 genes out of 31,398 genes analysed were expressed significantly different (pâ
DOI: 10.6084/m9.figshare.7503482.v1
title: MOESM2 of Proteomic analysis of serum proteins from HIV/AIDS patients with Talaromyces marneffei infection by TMT labeling-based quantitative proteomics

description: Additional file 2. Protein list detected by LCâ MS/MS. (Table S1, sheet 1) at least 1.5-fold up-or downregulated and (Table S2, sheet 2) total.
DOI: 10.6084/m9.figshare.7503479.v1
title: Additional file 3: of Biological clock function is linked to proactive and reactive personality types

description: Table S1. Differently expressed genes in early emerging (EE) and late emerging (LE) fish. Analysis of the EE and LE transcriptome data show that 1478 genes out of 31,398 genes analysed were expressed significantly different (pâ
DOI: 10.7284/113404
title: TSG (Thermosalinograph) data collected during research cruise KN211-02 using a Sea-Bird SBE-45 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112076
title: Multiplexed data collected during research cruise KN211-03 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112075
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN211-03 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503449
title: Additional file 6: of Comparative proteogenomic analysis of right-sided colon cancer, left-sided colon cancer and rectal cancer reveals distinct mutational profiles

description: Table S4. Proteomics pathway and gene level analysis results. (XLSX 47 kb)
DOI: 10.6084/m9.figshare.7503449.v1
title: Additional file 6: of Comparative proteogenomic analysis of right-sided colon cancer, left-sided colon cancer and rectal cancer reveals distinct mutational profiles

description: Table S4. Proteomics pathway and gene level analysis results. (XLSX 47 kb)
DOI: 10.7284/113410
title: Fluorometer data collected during research cruise KN211-03 using a WET Labs WETStar instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503437
title: Additional file 4: of Comparative proteogenomic analysis of right-sided colon cancer, left-sided colon cancer and rectal cancer reveals distinct mutational profiles

description: Tables S1-S3.Â PicNiC statistics (bic and aic) for RCC, LCC and rectal cancers. (XLSX 43 kb)
DOI: 10.6084/m9.figshare.7503437.v1
title: Additional file 4: of Comparative proteogenomic analysis of right-sided colon cancer, left-sided colon cancer and rectal cancer reveals distinct mutational profiles

description: Tables S1-S3.Â PicNiC statistics (bic and aic) for RCC, LCC and rectal cancers. (XLSX 43 kb)
DOI: 10.7284/112077
title: GNSS (Global Navigation Satellite System) data collected during research cruise KN211-03 using a C&C C-Nav 2000 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113409
title: Meteorological Station data collected during research cruise KN211-03 using a Vaisala WXT520 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113412
title: Meteorological Station data collected during research cruise KN211-03 using a Vaisala WXT520 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113413
title: Radiometer data collected during research cruise KN211-03 using a Eppley PIR instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503404
title: Additional file 2: of Characteristics and impact of the most-cited palliative oncology studies from 1995 to 2016

description: Table S2. Top 100 most-cited palliative oncology studies in 2006-2016. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.7503395
title: MOESM3 of Methylome of human senescent hematopoietic progenitors

description: Additional file 3. A representative region of chromosome 6 showing the characteristic overlap of hypoDMRs with repeat elements.
DOI: 10.6084/m9.figshare.7503404.v1
title: Additional file 2: of Characteristics and impact of the most-cited palliative oncology studies from 1995 to 2016

description: Table S2. Top 100 most-cited palliative oncology studies in 2006-2016. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.7503398
title: Additional file 1: of Characteristics and impact of the most-cited palliative oncology studies from 1995 to 2016

description: Table S1. Top 100 most-cited palliative oncology studies in 1995-2005. (XLSX 21 kb)
DOI: 10.7284/113414
title: Radiometer data collected during research cruise KN211-03 using a Eppley PSP instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503395.v1
title: MOESM3 of Methylome of human senescent hematopoietic progenitors

description: Additional file 3. A representative region of chromosome 6 showing the characteristic overlap of hypoDMRs with repeat elements.
DOI: 10.6084/m9.figshare.7503398.v1
title: Additional file 1: of Characteristics and impact of the most-cited palliative oncology studies from 1995 to 2016

description: Table S1. Top 100 most-cited palliative oncology studies in 1995-2005. (XLSX 21 kb)
DOI: 10.7284/113415
title: Water Temperature data collected during research cruise KN211-03 using a Sea-Bird SBE-48 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503386
title: Additional file 2: of A systematic mixed studies review on Organizational Participatory Research: towards operational guidance

description: Data extraction form. This Excel form used for all 83 studies included in this review. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.7503386.v1
title: Additional file 2: of A systematic mixed studies review on Organizational Participatory Research: towards operational guidance

description: Data extraction form. This Excel form used for all 83 studies included in this review. (XLSX 12 kb)
DOI: 10.7284/113411
title: TSG (Thermosalinograph) data collected during research cruise KN211-03 using a Sea-Bird SBE-45 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503380
title: MOESM1 of Methylome of human senescent hematopoietic progenitors

description: Additional file 1. Compiled list of differentially methylated regions in senescent vs. active HSPCs, including 51 hypomethylated and 10 hypermethylated regions.
DOI: 10.6084/m9.figshare.7503380.v1
title: MOESM1 of Methylome of human senescent hematopoietic progenitors

description: Additional file 1. Compiled list of differentially methylated regions in senescent vs. active HSPCs, including 51 hypomethylated and 10 hypermethylated regions.
DOI: 10.7284/112079
title: Multiplexed data collected during research cruise KN212 using a WHOI Calliope instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503371
title: Additional file 9: of Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

description: Data file S2. List of KEGG organisms with completely sequenced genomes used for protein sequence searches. (TXT 8 kb)
DOI: 10.6084/m9.figshare.7503371.v1
title: Additional file 9: of Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

description: Data file S2. List of KEGG organisms with completely sequenced genomes used for protein sequence searches. (TXT 8 kb)
DOI: 10.7284/112078
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise KN212 using a Hawaii UHDAS instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503359
title: Additional file 6: of Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

description: Table S2. Table of 2HADHs of known crystal structure. (XLSX 495 kb)
DOI: 10.6084/m9.figshare.7503359.v1
title: Additional file 6: of Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

description: Table S2. Table of 2HADHs of known crystal structure. (XLSX 495 kb)
DOI: 10.7284/113417
title: Fluorometer data collected during research cruise KN212 using a WET Labs WETStar instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503347
title: Additional file 5: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells

description: Table S2. Differential expression analysis of iPS-microglia versus iPS-microglia2.0. (XLSX 80 kb)
DOI: 10.7284/112080
title: GNSS (Global Navigation Satellite System) data collected during research cruise KN212 using a C&C C-Nav 2000 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113416
title: Meteorological Station data collected during research cruise KN212 using a Vaisala WXT520 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503341
title: Additional file 4: of Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

description: Table S1. Kinetic parameters for 2HADHs and prominent substrates described in the literature. (XLSX 503 kb)
DOI: 10.6084/m9.figshare.7503347.v1
title: Additional file 5: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells

description: Table S3. Differential expression analysis of iPS-HPC versus iPS-HPC2.0. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7503347.v2
title: Additional file 5: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells

description: Table S2. Differential expression analysis of iPS-microglia versus iPS-microglia2.0. (XLSX 80 kb)
DOI: 10.6084/m9.figshare.7503338
title: Additional file 4: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells

description: Table S3. Differential expression analysis of iPS-HPC versus iPS-HPC2.0. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7503341.v1
title: Additional file 4: of Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

description: Table S1. Kinetic parameters for 2HADHs and prominent substrates described in the literature. (XLSX 503 kb)
DOI: 10.6084/m9.figshare.7503335
title: Additional file 3: of Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

description: Data file S1. Phylogenetic trees in Newick format. In the order of appearance in the file: 1) maximum-likelihood tree computed with FastTree, 2) maximum-likelihood tree computed with RAxML, 3) neighbor-joining tree computed with BioNJ. Node names refer to either KEGG or UniProt accessions. (TXT 59 kb)
DOI: 10.6084/m9.figshare.7503338.v2
title: Additional file 4: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells

description: Table S3. Differential expression analysis of iPS-HPC versus iPS-HPC2.0. (XLSX 11 kb)
DOI: 10.7284/113419
title: Meteorological Station data collected during research cruise KN212 using a Vaisala WXT520 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503332
title: Additional file 3: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells

description: Table S1. Significantly changed genes between iPS-microglia, iPS-microglia 2.0, CD14 monocytes, and CD16 monocytes. (XLSX 1562 kb)
DOI: 10.6084/m9.figshare.7503335.v1
title: Additional file 3: of Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase

description: Data file S1. Phylogenetic trees in Newick format. In the order of appearance in the file: 1) maximum-likelihood tree computed with FastTree, 2) maximum-likelihood tree computed with RAxML, 3) neighbor-joining tree computed with BioNJ. Node names refer to either KEGG or UniProt accessions. (TXT 59 kb)
DOI: 10.6084/m9.figshare.7503338.v1
title: Additional file 4: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells

description: Table S2. Differential expression analysis of iPS-microglia versus iPS-microglia2.0. (XLSX 80 kb)
DOI: 10.7284/113420
title: Radiometer data collected during research cruise KN212 using a Eppley PIR instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503323
title: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells

description: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells
DOI: 10.6084/m9.figshare.7503332.v1
title: Additional file 3: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells

description: Table S1. Significantly changed genes between iPS-microglia, iPS-microglia 2.0, CD14 monocytes, and CD16 monocytes. (XLSX 1562 kb)
DOI: 10.6084/m9.figshare.7503332.v2
title: Additional file 3: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells

description: Table S1. Significantly changed genes between iPS-microglia, iPS-microglia 2.0, CD14 monocytes, and CD16 monocytes. (XLSX 1562 kb)
DOI: 10.7284/113421
title: Radiometer data collected during research cruise KN212 using a Eppley PSP instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7503323.v2
title: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells

description: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells
DOI: 10.6084/m9.figshare.7503323.v1
title: Additional file 2: of Development and validation of a simplified method to generate human microglia from pluripotent stem cells

description: Figure S2. Both HPC and HPC 2.0 methods produce cells with consistently high expression of the primitive HPC marker CD43. (Top) Quantification of flow cytometry analysis from four independent iPSC lines per method (nâ =â 3 wells/line) reveal a similarly high proportion of cells (&gt;â 90%) that express the primitive HPC marker CD43 following differentiation with either our previous or currently described approach. In contrast, two other primitive HPC markers, CD41 and CD235a, exhibit relatively low and heterogeneous expression within this CD43+ population (Middle). Representative FACS plots demonstrating typical CD43+ histograms (pre gated for live, single cells). Gates were drawn based on FMO (fluorescence minus one) controls. (Bottom) Heatmap from RNA sequencing of iPS-HPC samples shows similar gene expression levels for CD43, CD41, and CD235a. (XLSX 1415 kb)
DOI: 10.7284/113422
title: Water Temperature data collected during research cruise KN212 using a Sea-Bird SBE-48 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113418
title: TSG (Thermosalinograph) data collected during research cruise KN212 using a Sea-Bird SBE-45 instrument system onboard the platform RV Knorr

description: Original (unprocessed) data collected during a Field_expedition