cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12109602.v1
title: Additional file 4 of Identification of key genes and pathways associated with feed efficiency of native chickens based on transcriptome data via bioinformatics analysis

description: Additional file 4: Table S4. GO and KEGG analysis of genes in each module
DOI: 10.6084/m9.figshare.12109608.v1
title: Additional file 5 of Identification of key genes and pathways associated with feed efficiency of native chickens based on transcriptome data via bioinformatics analysis

description: Additional file 5: Table S5. An entire result of Gene set enrichment analysis (GSEA) between HRFI and LRFI birds
DOI: 10.6084/m9.figshare.12109599.v1
title: Additional file 4 of Vitamins D3 and D2 have marked but different global effects on gene expression in a rat oligodendrocyte precursor cell line

description: Additional file 4. Comparative functional enrichment analysis of the three groups of genes in Additional File 3: Supplementary Fig. S1 and S2. The description of the data reported is provided in the README sheet (xlsx 46 KB).
DOI: 10.6084/m9.figshare.12109587
title: Additional file 2 of Identification of key genes and pathways associated with feed efficiency of native chickens based on transcriptome data via bioinformatics analysis

description: Additional file 2: Table S2. All differentially expressed genes (DEGs) between HRFI and LRFI groups.
DOI: 10.6084/m9.figshare.12109593
title: Additional file 3 of Identification of key genes and pathways associated with feed efficiency of native chickens based on transcriptome data via bioinformatics analysis

description: Additional file 3: Table S3. All enriched GO terms of differentially expressed genes in breast muscle between the HRFI and LRFI groups
DOI: 10.6084/m9.figshare.12109584
title: Additional file 2 of Vitamins D3 and D2 have marked but different global effects on gene expression in a rat oligodendrocyte precursor cell line

description: Additional file 2. Functional enrichment analysis (Gene Ontology, Biological Process category) of the genes with an Entrez gene identifier represented by the probes clustered in Fig. 3. The description of the data reported is provided in the README sheet (xlsx 38 KB).
DOI: 10.6084/m9.figshare.12109593.v1
title: Additional file 3 of Identification of key genes and pathways associated with feed efficiency of native chickens based on transcriptome data via bioinformatics analysis

description: Additional file 3: Table S3. All enriched GO terms of differentially expressed genes in breast muscle between the HRFI and LRFI groups
DOI: 10.6084/m9.figshare.12109575
title: Additional file 1 of Vitamins D3 and D2 have marked but different global effects on gene expression in a rat oligodendrocyte precursor cell line

description: Additional file 1. Summary of all significant differences identified in the study (only microarray probes annotated with an Entrez gene identifier are considered). A complete description of the data reported is provided in the README sheet (xlsx 1.8 MB).
DOI: 10.6084/m9.figshare.12109575.v1
title: Additional file 1 of Vitamins D3 and D2 have marked but different global effects on gene expression in a rat oligodendrocyte precursor cell line

description: Additional file 1. Summary of all significant differences identified in the study (only microarray probes annotated with an Entrez gene identifier are considered). A complete description of the data reported is provided in the README sheet (xlsx 1.8 MB).
DOI: 10.6084/m9.figshare.12109584.v1
title: Additional file 2 of Vitamins D3 and D2 have marked but different global effects on gene expression in a rat oligodendrocyte precursor cell line

description: Additional file 2. Functional enrichment analysis (Gene Ontology, Biological Process category) of the genes with an Entrez gene identifier represented by the probes clustered in Fig. 3. The description of the data reported is provided in the README sheet (xlsx 38 KB).
DOI: 10.6084/m9.figshare.12109587.v1
title: Additional file 2 of Identification of key genes and pathways associated with feed efficiency of native chickens based on transcriptome data via bioinformatics analysis

description: Additional file 2: Table S2. All differentially expressed genes (DEGs) between HRFI and LRFI groups.
DOI: 10.6084/m9.figshare.12109506
title: Additional file 3 of Lung transcriptomic clock predicts premature aging in cigarette smoke-exposed mice

description: Additional file 3.
DOI: 10.6084/m9.figshare.12109506.v1
title: Additional file 3 of Lung transcriptomic clock predicts premature aging in cigarette smoke-exposed mice

description: Additional file 3.
DOI: 10.6084/m9.figshare.12109482
title: Additional file 9 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 9: Table S8. Counts of CNVR and SNP with tagged SNP and SNP with Signatures of Selection (iHS &gt; 3).
DOI: 10.6084/m9.figshare.12109470
title: Additional file 3 of Genome wide screening and comparative genome analysis for Meta-QTLs, ortho-MQTLs and candidate genes controlling yield and yield-related traits in rice

description: Additional file 3. The list of MQTLs located at selective sweep regions and functional variants on coding regions with well-known genes.
DOI: 10.6084/m9.figshare.12109473
title: Additional file 4 of Genome wide screening and comparative genome analysis for Meta-QTLs, ortho-MQTLs and candidate genes controlling yield and yield-related traits in rice

description: Additional file 4. The orthologous genes located at the syntenic regions of each ortho-MQTLs.
DOI: 10.6084/m9.figshare.12109482.v1
title: Additional file 9 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 9: Table S8. Counts of CNVR and SNP with tagged SNP and SNP with Signatures of Selection (iHS &gt; 3).
DOI: 10.6084/m9.figshare.12109476
title: Additional file 8 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 8: Table S7. Haplotypes that tag CNVR in each of the populations.
DOI: 10.6084/m9.figshare.12109470.v1
title: Additional file 3 of Genome wide screening and comparative genome analysis for Meta-QTLs, ortho-MQTLs and candidate genes controlling yield and yield-related traits in rice

description: Additional file 3. The list of MQTLs located at selective sweep regions and functional variants on coding regions with well-known genes.
DOI: 10.6084/m9.figshare.12109476.v1
title: Additional file 8 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 8: Table S7. Haplotypes that tag CNVR in each of the populations.
DOI: 10.6084/m9.figshare.12109461
title: Additional file 2 of Genome wide screening and comparative genome analysis for Meta-QTLs, ortho-MQTLs and candidate genes controlling yield and yield-related traits in rice

description: Additional file 2. The list of CGs and all annotated genes anchoring at each MQTL interval. In the list of CGs, the highlighted genes in green indicate the proved cloned genes.
DOI: 10.6084/m9.figshare.12109464
title: Additional file 7 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 7: Table S6A. All CNVR intersecting OMIM genes B. Novel CNVR intersecting OMIM genes.
DOI: 10.6084/m9.figshare.12109473.v1
title: Additional file 4 of Genome wide screening and comparative genome analysis for Meta-QTLs, ortho-MQTLs and candidate genes controlling yield and yield-related traits in rice

description: Additional file 4. The orthologous genes located at the syntenic regions of each ortho-MQTLs.
DOI: 10.6084/m9.figshare.12109455
title: Additional file 6 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 6: Table S5. Novel CNVR intersecting the GWAS catalogue SNPs.
DOI: 10.6084/m9.figshare.12109464.v1
title: Additional file 7 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 7: Table S6A. All CNVR intersecting OMIM genes B. Novel CNVR intersecting OMIM genes.
DOI: 10.6084/m9.figshare.12109446
title: Additional file 5 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 5: Table S4. Genes intersected by novel CNV.
DOI: 10.6084/m9.figshare.12109455.v1
title: Additional file 6 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 6: Table S5. Novel CNVR intersecting the GWAS catalogue SNPs.
DOI: 10.6084/m9.figshare.12109434
title: Additional file 4 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 4: Table S3. Counts of CNV types detected by both algorithms.
DOI: 10.6084/m9.figshare.12109446.v1
title: Additional file 5 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 5: Table S4. Genes intersected by novel CNV.
DOI: 10.6084/m9.figshare.12109434.v1
title: Additional file 4 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 4: Table S3. Counts of CNV types detected by both algorithms.
DOI: 10.6084/m9.figshare.12109428
title: Additional file 3 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 3: Table S2. GenomeSTRiP CNVR that intersect cn.MOPS CNVR after QC.
DOI: 10.6084/m9.figshare.12109428.v1
title: Additional file 3 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 3: Table S2. GenomeSTRiP CNVR that intersect cn.MOPS CNVR after QC.
DOI: 10.6084/m9.figshare.12109410
title: Additional file 1 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 1: Table S1. List of samples in the study.
DOI: 10.6084/m9.figshare.12109404
title: Additional file 12 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 12: Table S11. Effect of Prior Impact and Minimum width on concordance with DGV in cn.MOPS.
DOI: 10.6084/m9.figshare.12109410.v1
title: Additional file 1 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 1: Table S1. List of samples in the study.
DOI: 10.6084/m9.figshare.12109404.v1
title: Additional file 12 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 12: Table S11. Effect of Prior Impact and Minimum width on concordance with DGV in cn.MOPS.
DOI: 10.6084/m9.figshare.12109395
title: Additional file 11 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 11: Table S10. CNVR with high FST between populations.
DOI: 10.6084/m9.figshare.12109386
title: Additional file 10 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 10: Table S9. CNVR tagged by SNP haplotypes and also containing SNP signatures of selection.
DOI: 10.6084/m9.figshare.12109395.v1
title: Additional file 11 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 11: Table S10. CNVR with high FST between populations.
DOI: 10.6084/m9.figshare.12109386.v1
title: Additional file 10 of Copy number variation in human genomes from three major ethno-linguistic groups in Africa

description: Additional file 10: Table S9. CNVR tagged by SNP haplotypes and also containing SNP signatures of selection.
DOI: 10.6084/m9.figshare.12109347
title: Additional file 20 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 20: Table S10. The list of 75 selected transcripts from the DESs represented in seeds and three housekeeping genes, which were used for qRT-PCR.
DOI: 10.6084/m9.figshare.12109353
title: Additional file 21 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 21: Table S11. Relative expression value of all selected transcript from DESs represented in seeds and three housekeeping genes, which were used for qRT-PCR.
DOI: 10.6084/m9.figshare.12109353.v1
title: Additional file 21 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 21: Table S11. Relative expression value of all selected transcript from DESs represented in seeds and three housekeeping genes, which were used for qRT-PCR.
DOI: 10.6084/m9.figshare.12109335
title: Additional file 18 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 18: Table S8. GO and KEGG enrichment analysis of significantly over- and under-represented GO terms of each category (BP, MF, and CC) and KEGG pathways for each cluster.
DOI: 10.6084/m9.figshare.12109338
title: Additional file 19 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 19: Table S9. The enriched pathways of all significantly DESs for each cluster.
DOI: 10.6084/m9.figshare.12109347.v1
title: Additional file 20 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 20: Table S10. The list of 75 selected transcripts from the DESs represented in seeds and three housekeeping genes, which were used for qRT-PCR.
DOI: 10.6084/m9.figshare.12109329
title: Additional file 2 of Impact of superimposed nephrological care to guidelines-directed management by primary care physicians of patients with stable chronic kidney disease: a randomized controlled trial

description: Additional file 2. SPPS file (data from anonymized patients in the observational study).
DOI: 10.6084/m9.figshare.12109332
title: Additional file 17 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 17: Table S7. The number of over- and under-represented GO terms of each category (BP, MF and CC), and related contigs in each cluster.
DOI: 10.6084/m9.figshare.12109335.v1
title: Additional file 18 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 18: Table S8. GO and KEGG enrichment analysis of significantly over- and under-represented GO terms of each category (BP, MF, and CC) and KEGG pathways for each cluster.
DOI: 10.6084/m9.figshare.12109338.v1
title: Additional file 19 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 19: Table S9. The enriched pathways of all significantly DESs for each cluster.
DOI: 10.6084/m9.figshare.12109323
title: Additional file 1 of Impact of superimposed nephrological care to guidelines-directed management by primary care physicians of patients with stable chronic kidney disease: a randomized controlled trial

description: Additional file 1. SPPS file (data from anonymized patients randomized in the study).
DOI: 10.6084/m9.figshare.12109320
title: Additional file 15 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 15: Table S5. Relative transcript expression value (log2) of all DESs (with a cut-off of P-value &lt;1e-8) in each developmental stages and related clusters.
DOI: 10.6084/m9.figshare.12109326
title: Additional file 16 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 16: Table S6. Pairwise comparison of transcripts expression values (log2) between different maturation stages (with a cut-off of P-value &lt;1e-8).
DOI: 10.6084/m9.figshare.12109329.v1
title: Additional file 2 of Impact of superimposed nephrological care to guidelines-directed management by primary care physicians of patients with stable chronic kidney disease: a randomized controlled trial

description: Additional file 2. SPPS file (data from anonymized patients in the observational study).
DOI: 10.6084/m9.figshare.12109323.v1
title: Additional file 1 of Impact of superimposed nephrological care to guidelines-directed management by primary care physicians of patients with stable chronic kidney disease: a randomized controlled trial

description: Additional file 1. SPPS file (data from anonymized patients randomized in the study).
DOI: 10.6084/m9.figshare.12109332.v1
title: Additional file 17 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 17: Table S7. The number of over- and under-represented GO terms of each category (BP, MF and CC), and related contigs in each cluster.
DOI: 10.6084/m9.figshare.12109314
title: Additional file 14 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 14: Table S4 Mapping of the identified enzymes and their corresponding contigs to KEGG pathways.
DOI: 10.6084/m9.figshare.12109320.v1
title: Additional file 15 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 15: Table S5. Relative transcript expression value (log2) of all DESs (with a cut-off of P-value &lt;1e-8) in each developmental stages and related clusters.
DOI: 10.6084/m9.figshare.12109326.v1
title: Additional file 16 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 16: Table S6. Pairwise comparison of transcripts expression values (log2) between different maturation stages (with a cut-off of P-value &lt;1e-8).
DOI: 10.6084/m9.figshare.12109302
title: Additional file 12 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 12: Table S2. GO classification of annotated transcripts of whole seed transcript sequencing data. Results are summarized for three main GO categories (BP, MF, and CC).
DOI: 10.6084/m9.figshare.12109308
title: Additional file 13 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 13: Table S3. Annotation of whole transcript sequencing data according to Blast2Go, InterProScan, and KEGG. Manual annotation was carried out to predict RGA, TF and transporter sequences using the Plant Resistance Genes, the Plant Transcription Factor, and the Transporter Classification Databases.
DOI: 10.6084/m9.figshare.12109314.v1
title: Additional file 14 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 14: Table S4 Mapping of the identified enzymes and their corresponding contigs to KEGG pathways.
DOI: 10.6084/m9.figshare.12109302.v1
title: Additional file 12 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 12: Table S2. GO classification of annotated transcripts of whole seed transcript sequencing data. Results are summarized for three main GO categories (BP, MF, and CC).
DOI: 10.6084/m9.figshare.12109308.v1
title: Additional file 13 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 13: Table S3. Annotation of whole transcript sequencing data according to Blast2Go, InterProScan, and KEGG. Manual annotation was carried out to predict RGA, TF and transporter sequences using the Plant Resistance Genes, the Plant Transcription Factor, and the Transporter Classification Databases.
DOI: 10.6084/m9.figshare.12109293
title: Additional file 11 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 11: Table S1. Sequence comparison between obtained contigs and the Jatropha transcriptomic sequences of Kazusa DNA Research Institute (JAT_r4.5, ftp://ftp.kazusa.or.jp/pub/Jatropha/), as well as Chinese Academy of Sciences (JatCur_1.0, ftp://ftp.ncbi.nih.gov/ genomes/Jatropha_curcas/).
DOI: 10.6084/m9.figshare.12109293.v1
title: Additional file 11 of Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

description: Additional file 11: Table S1. Sequence comparison between obtained contigs and the Jatropha transcriptomic sequences of Kazusa DNA Research Institute (JAT_r4.5, ftp://ftp.kazusa.or.jp/pub/Jatropha/), as well as Chinese Academy of Sciences (JatCur_1.0, ftp://ftp.ncbi.nih.gov/ genomes/Jatropha_curcas/).
DOI: 10.6084/m9.figshare.12109269
title: Additional file 1 of Reducing the size of an alien segment carrying leaf rust and stripe rust resistance in wheat

description: Additional file 1: Figure S1. Schematic presentation of the recombinant 6B chromosome from primary to tertiary stages. Primary recombinant contains chromatin of Galil and Ae.sharonensis origins. Secondary recombinants present significantly shortened Ae.sharonensis chromatin either from the long or the short arm of the chromosome. A cross between the two types of secondary recombinants produced further shortened tertiary recombinant.
DOI: 10.6084/m9.figshare.12109269.v1
title: Additional file 1 of Reducing the size of an alien segment carrying leaf rust and stripe rust resistance in wheat

description: Additional file 1: Figure S1. Schematic presentation of the recombinant 6B chromosome from primary to tertiary stages. Primary recombinant contains chromatin of Galil and Ae.sharonensis origins. Secondary recombinants present significantly shortened Ae.sharonensis chromatin either from the long or the short arm of the chromosome. A cross between the two types of secondary recombinants produced further shortened tertiary recombinant.
DOI: 10.6084/m9.figshare.12108978
title: Dataset from Uncovering the behaviour of road accidents in urban areas

description: Dataset containing information about the population and number of accidents during the years 2008-2018 in each of the built-up areas from England and Wales
DOI: 10.6084/m9.figshare.12108984
title: Dataset of male rat copulatory behavior

description: Data was obtained from two cohorts of 25 sexually naive male rats each one (n=50). They were tested in 6 weekly copulatory encounters aimed at classifying them based on Ejaculation Latency or Ejaculation Number. We recorded, per male rat, the next copulatory parameters: latencies of mount, intromission and ejaculation, displayed as the mean of averaging the total ejacualtory series in seconds; and the accumulated number of mounts, intromissions and ejaculations for all the ejaculatory series executed in every 30-minute copulatory test. We used this dataset to build a PCA biplot and a complete-linkage dendrogram.<br>
DOI: 10.6084/m9.figshare.12108978.v1
title: Dataset from Uncovering the behaviour of road accidents in urban areas

description: Dataset containing information about the population and number of accidents during the years 2008-2018 in each of the built-up areas from England and Wales
DOI: 10.6084/m9.figshare.12108945
title: Qinling

description: Supplementary tables