cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.t1n04/9
title: fit_data_fig_2A

description: Psychometric function fit data for responses in xyn_fig_2A.mat file.
DOI: 10.5061/dryad.v6f4d/12
title: b.out_parental sympatry

description: Output from BGC run on parental sympatry test population: estimates of cline parameter beta for the 77 loci.
DOI: 10.5061/dryad.v6f4d/13
title: hi.out_parental sympatry

description: Output from BGC run on parental sympatry test population: estimates of hybrid index.
DOI: 10.5061/dryad.v6f4d/14
title: qa.out_parental sympatry

description: Output from BGC run on parental sympatry test population: estimates of alpha parameter quantiles for the 77 loci.
DOI: 10.5061/dryad.v6f4d/15
title: qb.out_parental sympatry

description: output from BGC run on parental sympatry test population: estimates of beta parameter quantiles for the 77 loci
DOI: 10.5061/dryad.v6f4d/16
title: bgc input file for house sparrow parental population (reference population) when analysing autosomal loci separately

description: input file for house sparrow parental population (reference population) when analysing autosomal loci separately in parental sympatry
DOI: 10.5061/dryad.v6f4d/17
title: bgc input file for Spanish sparrow parental population (reference population) when analysing autosomal loci separately in parental sympatry

description: bgc input file for Spanish sparrow parental population (reference population) when analysing autosomal loci separately in parental sympatry
DOI: 10.5061/dryad.v6f4d/18
title: bgc input file for parental sympatry test population when analysing autosomal loci separately

description: bgc input file for parental sympatry test population when analysing autosomal loci separately
DOI: 10.5061/dryad.v6f4d/19
title: b.out_autosomal_parental sympatry

description: output from BGC run on parental sympatry test population: estimates of cline parameter beta for the 55 autosomal loci analyzed separately
DOI: 10.5061/dryad.v6f4d/20
title: bgc input file for house sparrow parental population (reference population) when analysing Z-linked loci separately in parental sympatry

description: bgc input file for house sparrow parental population (reference population) when analysing Z-linked loci separately in parental sympatry
DOI: 10.7925/drs1.ucdlib_31955
title: 2-3 Westmoreland Street, Dublin

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 5 levels above ground, constructed 1935.
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_31957
title: 47 Nassau Street, Dublin

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 4 levels above ground.
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_31959
title: 6 Westmoreland Street, Dublin 2, Ireland

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 5 levels above ground, constructed 1889.
description: Dublin City Council, Record of Protected Structures (2010), no. 8533
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_31961
title: 7 Westmoreland Street, Dublin 2, Ireland

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Blockwork & Stone structure, 5 levels above ground, constructed 1886.
description: Dublin City Council, Record of Protected Structures (2010), no. 8534
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_31963
title: 50 Nassau Street, Dublin 2, Ireland

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork & stone structure, 5 levels above ground.
description: Dublin City Council, Record of Protected Structures (2010), no. 5807
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_31965
title: 9 Westmoreland Street, Dublin 2, Ireland

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Blockwork structure, 5 levels above ground.
description: Dublin City Council, Record of Protected Structures (2010), no. 8536
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_31967
title: 10 Westmoreland Street, Dublin 2, Ireland

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Blockwork structure, 5 levels above ground, constructed 1867.
description: Dublin City Council, Record of Protected Structures (2010), no. 8537
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.5061/dryad.105c0/11
title: Duptree IndiFin1con50

description: 50% majority rule consensus tree from Gene tree parsimony analysis of post-burnin Bayesian trees from the analyses of the individual data sets.
DOI: 10.5061/dryad.105c0/2
title: Hemocyanin A ortholog Group

description: Ortholog group A with Bayesian consensus trees
DOI: 10.5061/dryad.25696/1
title: qPCRvalid_Neo_array
DOI: 10.5061/dryad.2k462/3
title: Data for Figure 3 (part 1)

description: See README
DOI: 10.5061/dryad.2k462/5
title: Code for Figure 1

description: Code to reproduce Figure 1
DOI: 10.5061/dryad.2k462/6
title: Code for Figure 2

description: Written as a knitr dynamic document, contains both code and documentation.
DOI: 10.5061/dryad.2vg12/1
title: Famennian Faunal Counts

description: These data are faunal counts from bedding planes of rock slabs constrained to Famennian units. All data is from western New York. The data consists almost entirely of brachiopods identified to the genus level.
DOI: 10.5061/dryad.3fp5b/1
title: Johnson2013peckdata

description: How often fish pecked at colored discs at different times of day (dawn, noon, dusk).  Data is summed across multiple observations.
DOI: 10.5061/dryad.7535k/11
title: PD_whole_tree

description: phylogenetic diversity calculated for 100 rarefactions (202 sequences) of each sample.
DOI: 10.5061/dryad.7535k/12
title: observed_species_L7

description: OTU richness calculated for each of 100 rarefactions (to 202 sequences) performed on each sample.
DOI: 10.5061/dryad.7535k/13
title: observed_species_L6

description: genus richness calculated for each of 100 rarefactions (to 202 sequences) performed on each sample.
DOI: 10.5061/dryad.7535k/14
title: observed_species_L5

description: family richness calculated for each of 100 rarefactions (to 202 sequences) performed on each sample.
DOI: 10.5061/dryad.7535k/15
title: observed_species_L4

description: order richness calculated for each of 100 rarefactions (to 202 sequences) performed on each sample.
DOI: 10.5061/dryad.7535k/16
title: observed_species_L3

description: class richness calculated for each of 100 rarefactions (to 202 sequences) performed on each sample.
DOI: 10.5061/dryad.7535k/17
title: observed_species_L2

description: phylum richness calculated for each of 100 rarefactions (to 202 sequences) performed on each sample.
DOI: 10.5061/dryad.7535k/18
title: simpson_L7

description: OTU diversity calculated by Simpson's diversity index in QIIME.
DOI: 10.5061/dryad.7535k/19
title: simpson_L6

description: Genus diversity calculated by Simpson's diversity index in QIIME.
DOI: 10.5061/dryad.78930/1
title: Dryad ID 12-0668.R2

description: Data collected in the field and literature
DOI: 10.5061/dryad.7r682/3
title: Morphological_data

description: Data on morphological traits for individual stickleback collected from 12 populations (six lake-stream pairs) on Vancouver Island, British Columbia, Canada.
DOI: 10.5061/dryad.9cn66/1
title: Corbicula spp. COI sequences alignment file.

description: Fasta file containing alignment of COI sequences (545 bp fragment) from Corbicula spp. The alignment was generated via BioEdit 7.0.5.3.
DOI: 10.5061/dryad.9q1n4/3
title: ann_deb_fst_map

description: SNP table for H. annuus - H. debilis comparison. This table also contain Fst ("Fst" column) values for each SNP and the position ("map_centiMorgan") and chromosome number ("LG") were SNPs are found.
DOI: 10.5061/dryad.9q1n4/7
title: coverage_per_gene_individuals

description: Column 1 is the name of the reference contig. Column 2, the length of the reference. Column 3 and after, the number of sequences aligedn to that particular contig (calculated using samtools idxstats).
DOI: 10.5061/dryad.b451g/3
title: Supplementary material, S3

description: An excel fine containing volume data for the different organ systems in these models, coupled with graphs showing the change in both tracheal and gut volume as a percentage of chrysalis volume throughout development.
DOI: 10.5061/dryad.bn281/1
title: python script to simulate RAD sequences

description: Uses the egglib python module to simulate RAD sequences evolving on a phylogeny under a coalescent model with or without introgression between lineages.
DOI: 10.5061/dryad.bn281/2
title: sequences at NCBI SRA: SRR833563

description: raw RADseq files for the 13 samples used in this study
DOI: 10.5061/dryad.bn281/5
title: Table_S2: BUCKy output

description: Results of Bayesian concordance analysis in BUCKy at two values for the prior alpha
DOI: 10.5061/dryad.dn584/2
title: nDNA DLDH sequences

description: nDNA sequences (.fas) of the dihydrolipoamide dehydrogenase (DLDH) gene, partial cds. 48 sequences. Alignment length: 1221bp.
DOI: 10.5061/dryad.dn584/3
title: nDNA FMRrm11 sequences

description: nDNA sequences (.fas) of the microsatellite RM11. 68 sequences. Alignment length: 609bp.
DOI: 10.5061/dryad.dn584/4
title: nDNA mang-1 sequences

description: nDNA sequences (.fas) of the mangrin (mang-1) gene, partial cds. 48 sequences. Alignment length: 438bp.
DOI: 10.5061/dryad.dn584/5
title: nDNA PAL1 sequences

description: nDNA sequences (.fas) of the phenylalanine ammonia-lyase (PAL1) gene, partial cds. 48 sequences. Alignment length: 940bp.
DOI: 10.5061/dryad.dn584/6
title: nDNA RPB2 sequences

description: nDNA sequences (.fas) of the putative RNA polymerase II second largest subunit (RPB2) gene, partial cds. 68 sequences. Alignment length: 126bp.
DOI: 10.5061/dryad.dn584/7
title: nDNA SBE2 sequences

description: nDNA sequences (.fas) of the starch branching enzyme II (SBE2) gene, partial cds. 48 sequences. Alignment length: 947bp.
DOI: 10.5061/dryad.gd93s/10
title: Silene nutans and otites X4

description: Alignment of nuclear X4 sequences
DOI: 10.5061/dryad.gd93s/8
title: Silene nutans and otites ATUB

description: Alignment of nuclear ATUB sequences
DOI: 10.5061/dryad.gd93s/9
title: Silene nutans and otites ELF

description: Alignment of nuclear ELF sequences
DOI: 10.5061/dryad.jf361/12
title: monosp_dryad

description: R code for calculating the number of monophyletic clades on estimated gene tree
DOI: 10.5061/dryad.jf361/13
title: mindis

description: R script for shallowest divergenece species tree estimation
DOI: 10.5061/dryad.jf361/14
title: treedist

description: R script for calculating RF distance
DOI: 10.5061/dryad.jf361/15
title: Genealogy.tar

description: Simulated genalogies
DOI: 10.5061/dryad.jf361/16
title: raxml

description: run raxml
DOI: 10.5061/dryad.jf361/17
title: CompleteSequenceData.tar

description: Simulated complete sequence data
DOI: 10.5061/dryad.jf361/18
title: CuttingMissing.tar

description: remaining sequences after filtering out sequences with mutations at enzyme cutting sites
DOI: 10.5061/dryad.jf361/19
title: CoverageMissing.tar

description: remaining data after filtering sequences with zero read, mean coverage set to 5x
DOI: 10.5061/dryad.jn3rr/5
title: Hobo data logger daily stage data

description: Daily average river stage data calculated from pressure transducer measurements recorded by a Hobo data logger. Stage elevations are in the same coordinates as the vegetation elevation data in the accompanying database.
DOI: 10.5061/dryad.n40jg/1
title: data130121

description: "data130121.csv" contains 53 variables for 274 individuals of Magnolia stellata, M. salicifolia and their hybrids. This data was used in the paper entitled "Asymmetric introgression between Magnolia stellata and M. salicifolia at a site where the two species grow sympatrically" which will be published from Tree Genetics and Genomes, doi = xxx. "data130121.csv" is separated by comma.
DOI: 10.5061/dryad.q1s1v/1
title: Data used for analyses of storage effects

description: Measured concentrations of hormone metabolites during the storage experiment for all storage conditions and time points.
DOI: 10.5061/dryad.t1n04/10
title: data_monkeys_by_testing_day

description: Psychometric function fit data for behavioral sessions of monkeys.
DOI: 10.5061/dryad.v6f4d/21
title: bgc input file for Spanish sparrow parental population (reference population) when analysing Z-linked loci separately in parental sympatry

description: bgc input file for Spanish sparrow parental population (reference population) when analysing Z-linked loci separately i parental sympatry
DOI: 10.5061/dryad.v6f4d/22
title: bgc input file for test population when analysing Z-linked loci separately in parental sympatry

description: bgc input file for test population when analysing Z-linked loci separately in parental sympatry
DOI: 10.5061/dryad.v6f4d/23
title: b.out_Z_parental sympatry

description: output from BGC: estimates of cline parameter beta for the 21 Z-linked loci analyzed separately in parental sympatry
DOI: 10.5061/dryad.v6f4d/24
title: bgc input file for hybrid-parents test population (all 77 loci)

description: bgc input file for hybrid-parents test population (all 77 loci)
DOI: 10.5061/dryad.v6f4d/25
title: a.out_hybrid-parents analysis

description: output from BGC: estimates of cline parameter alpha for 77 the loci used in the hybrid-parents analysis
DOI: 10.5061/dryad.v6f4d/26
title: b.out_hybrid-parents analysis

description: output from BGC: estimates of cline parameter beta for 77 the loci used in the hybrid-parents analysis
DOI: 10.5061/dryad.v6f4d/27
title: hi.out_hybrid-parents analysis

description: output from BGC: estimates of hybrid index for the individuals in the hybrid-parents test population
DOI: 10.5061/dryad.v6f4d/28
title: qa.out_hybrid-parents analysis

description: bgc output from hybrid-parents analysis: estimates of alpha parameter quantiles for the 77 loci
DOI: 10.5061/dryad.v6f4d/29
title: qb.out_hybrid-parents analysis

description: bgc output from hybrid-parents analysis: estimates of beta parameter quantiles for the 77 loci
DOI: 10.7925/drs1.ucdlib_31969
title: 1 Anne Street South, Dublin 2, Ireland

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 3 levels above ground, constructed 20th century.
description: Dublin City Council, Record of Protected Structures (2010), no. 179
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_31971
title: 14 Westmoreland Street, Dublin 2, Ireland

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Stone cladding structure, 5 levels above ground, constructed 1866.
description: Dublin City Council, Record of Protected Structures (2010), no. 8539
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_31973
title: 15 Westmoreland Street, Dublin 2, Ireland

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 5 levels above ground.
description: Dublin City Council, Record of Protected Structures (2010), no. 8540
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_31975
title: 3 Anne Street South, Dublin

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 3 levels above ground.
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_31977
title: 17 Westmoreland Street, Dublin

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 5 levels above ground.
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_31979
title: 18-19 Westmoreland Street, Dublin

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 5 levels above ground, constructed 1979.
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.
DOI: 10.7925/drs1.ucdlib_31981
title: 5 Anne Street South, Dublin 2, Ireland

description: Consists of an orthorectified image of the structure in Adobe PhotoShop (PSD) format. The orthorectified image has been derived from one or more photographic images that are included as layers in the original Adobe PhotoShop (PSD) file. The composite and all other image layers have been extracted and saved in TIFF image files, and JPEG files in various resolutions have been derived from the flattened image layer to facilitate inspection.
description: Brickwork structure, 4 levels above ground, constructed 20th century.
description: Dublin City Council, Record of Protected Structures (2010), no. 181
description: Funded by an award from the Irish Research Council for Science, Engineering and Technology (IRCSET), Embark Initiative Postgraduate Scholarship, grant identifier RS/2011/435.