cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3780420
title: Molecular dynamics simulation data of regulatory ACT domain dimer mutation (L48S) of human phenylalanine hydroxylase (PAH)

description: Raw data of molecular dynamics simulations of regulatory ACT domain dimer mutation (L48S). <strong>binding.zip</strong>: simulation of dimer with 19 Phe ligand <strong>bound.zip</strong>: simulation of dimer with bound Phe ligand <strong>dimer.zip</strong>: simulation of dimer only Simulation setup files are also included in each folder.
DOI: 10.5281/zenodo.3780361
title: Molecular dynamics simulation data of regulatory ACT domain dimer mutation (T63P) of human phenylalanine hydroxylase (PAH)

description: Raw data of molecular dynamics simulations of regulatory ACT domain dimer mutation (T63P). <strong>binding.zip</strong>: simulation of dimer with 19 Phe ligand <strong>bound.zip</strong>: simulation of dimer with bound Phe ligand <strong>dimer.zip</strong>: simulation of dimer only Simulation setup files are also included in each folder.
DOI: 10.5281/zenodo.3780360
title: Molecular dynamics simulation data of regulatory ACT domain dimer mutation (T63P) of human phenylalanine hydroxylase (PAH)

description: Raw data of molecular dynamics simulations of regulatory ACT domain dimer mutation (T63P). <strong>binding.zip</strong>: simulation of dimer with 19 Phe ligand <strong>bound.zip</strong>: simulation of dimer with bound Phe ligand <strong>dimer.zip</strong>: simulation of dimer only Simulation setup files are also included in each folder.
DOI: 10.5281/zenodo.3780421
title: Molecular dynamics simulation data of regulatory ACT domain dimer mutation (R68S) of human phenylalanine hydroxylase (PAH)

description: Raw data of molecular dynamics simulations of regulatory ACT domain dimer mutation (R68S). <strong>binding.zip</strong>: simulation of dimer with 19 Phe ligand <strong>bound.zip</strong>: simulation of dimer with bound Phe ligand <strong>dimer.zip</strong>: simulation of dimer only Simulation setup files are also included in each folder.
DOI: 10.5281/zenodo.3780422
title: Molecular dynamics simulation data of regulatory ACT domain dimer mutation (R68S) of human phenylalanine hydroxylase (PAH)

description: Raw data of molecular dynamics simulations of regulatory ACT domain dimer mutation (R68S). <strong>binding.zip</strong>: simulation of dimer with 19 Phe ligand <strong>bound.zip</strong>: simulation of dimer with bound Phe ligand <strong>dimer.zip</strong>: simulation of dimer only Simulation setup files are also included in each folder.
DOI: 10.5519/qd.nwg891lf
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (2929 records)
DOI: 10.15468/36jccd
title: Studies on neotropical Phasmatodea XVIII: Four new species of Lobolibethra Hennemann & Conle, 2007 from Peru and Ecuador (Phasmatodea: “ Anareolatae ”: Diapheromeridae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hennemann, Frank H., Conle, Oskar V. (2018): Studies on neotropical Phasmatodea XVIII: Four new species of Lobolibethra Hennemann & Conle, 2007 from Peru and Ecuador (Phasmatodea: “ Anareolatae ”: Diapheromeridae). European Journal of Taxonomy 449: 1-33, DOI: https://doi.org/10.5852/ejt.2018.449
DOI: 10.15468/r9snds
title: Descriptions of eighteen new species of Glemparon, a previously monotypic genus of Porricondylinae (Diptera, Cecidomyiidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Jaschhof, Mathias, Jaschhof, Catrin (2018): Descriptions of eighteen new species of Glemparon, a previously monotypic genus of Porricondylinae (Diptera, Cecidomyiidae). European Journal of Taxonomy 450: 1-38, DOI: https://doi.org/10.5852/ejt.2018.450
DOI: 10.5281/zenodo.3813242
title: Polymer-assisted modification of metal-organic framework MIL-96 (Al): influence on particle size, crystal morphology and perfluorooctanoic acid (PFOA) removal

description: Dataset supporting publication under review.
DOI: 10.5519/qd.h9nps2b8
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (17 records)
DOI: 10.5281/zenodo.3813236
title: Wikidata Dump tendulkar

description: RDF dump of wikidata produced with wdumps. tt<br> View on wdumper <b>entity count</b>: 0, <b>statement count</b>: 0, <b>triple count</b>: 0
DOI: 10.5281/zenodo.3813427
title: Dataset related to the article "Acute outcome after a single cryoballoon ablation: Comparison between Arctic Front Advance and Arctic Front Advance PRO"

description: This record contains raw data related to the article “Acute outcome after a single cryoballoon ablation: Comparison between Arctic Front Advance and Arctic Front Advance PRO” ABSTRACT BACKGROUND: The novel fourth-generation cryoballoon (CB4) potentially allows for enhanced catheter maneuverability and more frequent capture of pulmonary vein (PV) potentials which can be used to monitor real-time PV isolation (PVI). The aim of our study is to compare the acute procedural endpoints between the CB4 and second-generation cryoballoon (CB2). METHODS: A single-center retrospective chart review was used to examine 50 consecutive patients with drug-refractory atrial fibrillation undergoing CB4-based PVI. Procedural data and acute success of these patients were compared to 50 propensity-matched controls who underwent cryoballoon ablation procedure using CB2. RESULTS: Procedures performed with the CB4 showed significant shorter fluoroscopy time (14.8 ± 5.5 vs 18.0 ± 6.5 minutes, P = .04), shorter procedure time (58.3 ± 15.7 vs 65.3 ± 21 minutes, P = .13), and shorter total ablation time (10.8 ± 1.5 vs 13.8 ± 1.9 minutes, P = .42). The real-time PVI visualization rate was 33.3% in the CB2 group and 74.7% in the CB4 group (P &lt; .001). CB4 was correlated to significant increase of acute real-time recordings with regard to all the single PV (left superior PV: 58% vs 84%, P = .02; left inferior PV: 26% vs 71%, P = .001; right superior PV 29% vs 61%, P = .01; and right inferior PV 19% vs 58%, P = .002). CONCLUSION: The CB4 was more often able to capture real-time recordings of PV potentials and the subsequent acute PV isolation.
DOI: 10.5281/zenodo.3813428
title: Dataset related to the article "Acute outcome after a single cryoballoon ablation: Comparison between Arctic Front Advance and Arctic Front Advance PRO"

description: This record contains raw data related to the article “Acute outcome after a single cryoballoon ablation: Comparison between Arctic Front Advance and Arctic Front Advance PRO” ABSTRACT BACKGROUND: The novel fourth-generation cryoballoon (CB4) potentially allows for enhanced catheter maneuverability and more frequent capture of pulmonary vein (PV) potentials which can be used to monitor real-time PV isolation (PVI). The aim of our study is to compare the acute procedural endpoints between the CB4 and second-generation cryoballoon (CB2). METHODS: A single-center retrospective chart review was used to examine 50 consecutive patients with drug-refractory atrial fibrillation undergoing CB4-based PVI. Procedural data and acute success of these patients were compared to 50 propensity-matched controls who underwent cryoballoon ablation procedure using CB2. RESULTS: Procedures performed with the CB4 showed significant shorter fluoroscopy time (14.8 ± 5.5 vs 18.0 ± 6.5 minutes, P = .04), shorter procedure time (58.3 ± 15.7 vs 65.3 ± 21 minutes, P = .13), and shorter total ablation time (10.8 ± 1.5 vs 13.8 ± 1.9 minutes, P = .42). The real-time PVI visualization rate was 33.3% in the CB2 group and 74.7% in the CB4 group (P &lt; .001). CB4 was correlated to significant increase of acute real-time recordings with regard to all the single PV (left superior PV: 58% vs 84%, P = .02; left inferior PV: 26% vs 71%, P = .001; right superior PV 29% vs 61%, P = .01; and right inferior PV 19% vs 58%, P = .002). CONCLUSION: The CB4 was more often able to capture real-time recordings of PV potentials and the subsequent acute PV isolation.
DOI: 10.5281/zenodo.3813446
title: Clustering datasets

description: Iris, Moon, and Circles datasets for Galaxy clustering tutorial
DOI: 10.5281/zenodo.3813447
title: Clustering datasets

description: Iris, Moon, and Circles datasets for Galaxy clustering tutorial
DOI: 10.6073/pasta/9db44f4e9ff05d6dd3bb3a7abbb5ccdd
title: Stream Consumers and Lotic Ecosystem Rates (SCALER) in streams of the HJ Andrews Experimental Forest, 2014-2016

description: SCALER attempts to address the question of whether small-scale ecological experiments can be applied to understand the behavior of entire ecological systems. Specifically, the role of comsumers to stream functional processes were examined by measurements of structure and function within stream reaches. These results feed into a broader continent wide examination within a variety of ecological systems. Rates of stream metabolism (photosynthesis and respiration) and nutrient uptake were measured, as well as the way these rates respond to animal exclusions (used to mimic loss of animal diversity in streams). Aquatic food web and biogeochemical responses in three consecutive 75m stream reaches were measured by manipulating densities of fish and amphibians (natural, depletion, and addition). Additionally, various stream characteristics were measured including streamflow, water chemistry, nutrients, metabolism, stream habitat measurements (wetted widths, depths and substrate), and canopy conditions (percent shade). The experiment was carried out every summer between 2014-2016 in streams of the HJ Andrews Experimental Forest to capture interannual variability.
DOI: 10.15468/butj9z
title: Integrative description of Macrobiotus canaricus sp. nov. with notes on M. recens (Eutardigrada: Macrobiotidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Stec, Daniel, Krzywański, Łukasz, Michalczyk, Łukasz (2018): Integrative description of Macrobiotus canaricus sp. nov. with notes on M. recens (Eutardigrada: Macrobiotidae). European Journal of Taxonomy 452: 1-36, DOI: https://doi.org/10.5852/ejt.2018.452
DOI: 10.5281/zenodo.3813235
title: Wikidata Dump tendulkar

description: RDF dump of wikidata produced with wdumps. tt<br> View on wdumper <b>entity count</b>: 0, <b>statement count</b>: 0, <b>triple count</b>: 0
DOI: 10.5286/isis.e.rb1510265-2
title: Li diffusion in complex olivine, Li(FeMn)PO4
DOI: 10.18112/openneuro.ds002785.v1.0.0
title: AOMIC-PIOP1
DOI: 10.17632/fdcvtf5nx6.1
title: Code smells and anti-patterns discussions in Stack Exchange sites

description: Data and supplementary material for the article "A large scale study on how developers discuss code smells and anti-pattern in Stack Exchange sites", to appear in Information and Software Technology (IST) journal (https://doi.org/10.1016/j.infsof.2020.106333).
DOI: 10.17632/mnc979ns38.1
title: Development and thermal performance of nanoencapsulated PCM/ plaster wallboard for thermal energy storage in buildings

description: This work deals with experimental study of the thermal behavior of new plaster composite containing a nanoencapsulated PCM. Nanocapsules containing phase change material (NPCM) n-dodecanol as core and polymethyl methacrylate (PMMA) and CuO nanoparticles as shell were synthesized by miniemulsion polymerization and characterized by using FTIR, SEM, TEM, DSC, TGA and laser particle diameter analyzer. The average diameter of PCM@CuO@PMMA was 195 nm, and the latent heat of phase change and encapsulation efficiency were 148.88 J/g and 72.28%, respectively.
DOI: 10.17632/cx3m8pf2ns.1
title: Sensitivity and regression analysis of acoustic parameters for determining physical properties of frozen fine sand with ultrasonic test

description: (1) Three-factor analysis of variance (ANOVA) Orthogonal tests are an effective means of multi-factor analysis and lend themselves to assessing the impact of relevant factors (Li Y. et al., 2010; Liu Y.Q. et al., 2016). An orthogonal experiment consisting of nine groups—L9(34)—selected three physical properties of frozen fine sand (temperature, density and water content) as factors to study the sensitivity of three acoustic parameters (wave velocity, attenuation coefficient and dominant frequency) to the physical properties. The values of the factors used for the orthogonal test are given in Table 2. Position for Table 2 (2) Control variable test The control variable test included two types of experiment. One had 16 groups of different levels of water content (4.31, 7.31, 10.31 and 13.31%) at a single level of density (1.87g/cm3) to study the relationships between sensitive acoustic parameters and physical properties (water content and temperature). The other had 16 groups of different levels of density (1.87, 1.8, 1.76 and 1.73g/cm3) under a single level of water content (7.31%) to study the relationships between sensitive acoustic parameters and density. Each group was evaluated three times at four levels of temperature (–5, –10, –15 and –20°C), and the results are mean values of repeated tests.
DOI: 10.17632/gg9mvdp875.1
title: CO2 capture data

description: The data shows how CO2 is captured over period of time and how it is desorbed upon heating.
DOI: 10.17632/jcr3cbzp38.1
title: Data for: Cenozoic amphibolite facies retrogression and exhumation during the India-Asia collision in the eastern Gangdese Belt, SW China
DOI: 10.17632/w5vbbzxgrb.1
title: spectrophotometric analyses of cells with MT-ATP6/8

description: Spectrophotometric assays made in primary fibroblasts, fibroblasts transduced with human telomerase catalytic subunit, and cybrids. First sheet= raw experimental data ranged by day of experiment, second sheet = data from each biological sample grouped together, third sheet: biological samples with the same mutation grouped together.
DOI: 10.5519/qd.xqpalnd7
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (25 records)
DOI: 10.21227/2j9c-1j21
title: Auscultatory and Oscillometry Blood Pressure Data

description: This data includes 350 Korotkoff sounds and their corresponding osciilometric waveforms, cuff pressure and detected systolic and diastolic pressures.
DOI: 10.5281/zenodo.3785376
title: Towards a Realistic Explosion Landscape for Binary Population Synthesis

description: Data from: Towards a Realistic Explosion Landscape for Binary Population Synthesis by Patton, Rachel A. and Sukhbold, Tuguldur<br> (2020). (Submitted to MNRAS) - Detailed descriptions of calculations are provided in the paper, but<br> please feel free to get in touch with any of us with questions, or<br> if you need something that is not provided here. Contacts:<br> Rachel Patton = patton[dot]502[at]osu[dot]edu<br> Tuguldur Sukhbold = tuguldur[dot]s[at]gmail[dot]com<br> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Below are brief descriptions of each dataset. More details can be found in the paper. kepler_table.tar.gz (1.0GB)<br> -These are tables for our entire set of 3496 KEPLER CO-core models, containing the final presupernova structure and composition quantities for each zone. Core masses range from 2.5 to 10.0 in increments of 0.1 Msun and the initial composition ranges from 5% carbon and 95% oxygen to 50% carbon and oxygen, in incrmeents of 1%. Each file has the naming convention "mA_B.ktbl" where A is the core mass in Msun (2.5, 2.6, etc.) and B represents the initial carbon mass fraction as the number of increments of 0.01 taken from 0.05 (5%). For example, the file 'm8.0_27.ktbl' would be for an 8 Msun core with an initial carbon mass fraction of 0.32 (= 0.05 + 27*0.01). kepler_datatset.tar.gz (30.4KB)<br> -This folder contains four tables listing the presupernova parameters evaluated from all of our KEPLER CO-cores: M_fe, the iron core mass, M4, the mass enclosed where the entropy per baryon reaches 4 Kb, mu_4, the radial gradient of mass at the location of M4, and xi_2.5, the compactness parameter. See section#3 of our paper for details on how these were evaluated. Columns represent each CO-core mass and rows represent starting carbon mass fraction. inlist (2.8KB)<br> -This is the inlist used to create 760 MESA (version 7624) CO-core models, presented in section#4.1. The only thing that changes between models is the CO-core mass, set by 'initial_mass' and the composition, set by 'accretion_species_xa(1)' and 'accretion_species_xa(2)'. In our grid, we covered the same mass and composition range as the KEPLER models, keeping the same mass increment but increasing the carbon mass increment from 0.01 to 0.05.
DOI: 10.5281/zenodo.3785377
title: Towards a Realistic Explosion Landscape for Binary Population Synthesis

description: Data from: Towards a Realistic Explosion Landscape for Binary Population Synthesis by Patton, Rachel A. and Sukhbold, Tuguldur<br> (2020). (Submitted to MNRAS) - Detailed descriptions of calculations are provided in the paper, but<br> please feel free to get in touch with any of us with questions, or<br> if you need something that is not provided here. Contacts:<br> Rachel Patton = patton[dot]502[at]osu[dot]edu<br> Tuguldur Sukhbold = tuguldur[dot]s[at]gmail[dot]com<br> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Below are brief descriptions of each dataset. More details can be found in the paper. kepler_table.tar.gz (1.0GB)<br> -These are tables for our entire set of 3496 KEPLER CO-core models, containing the final presupernova structure and composition quantities for each zone. Core masses range from 2.5 to 10.0 in increments of 0.1 Msun and the initial composition ranges from 5% carbon and 95% oxygen to 50% carbon and oxygen, in incrmeents of 1%. Each file has the naming convention "mA_B.ktbl" where A is the core mass in Msun (2.5, 2.6, etc.) and B represents the initial carbon mass fraction as the number of increments of 0.01 taken from 0.05 (5%). For example, the file 'm8.0_27.ktbl' would be for an 8 Msun core with an initial carbon mass fraction of 0.32 (= 0.05 + 27*0.01). kepler_datatset.tar.gz (30.4KB)<br> -This folder contains four tables listing the presupernova parameters evaluated from all of our KEPLER CO-cores: M_fe, the iron core mass, M4, the mass enclosed where the entropy per baryon reaches 4 Kb, mu_4, the radial gradient of mass at the location of M4, and xi_2.5, the compactness parameter. See section#3 of our paper for details on how these were evaluated. Columns represent each CO-core mass and rows represent starting carbon mass fraction. inlist (2.8KB)<br> -This is the inlist used to create 760 MESA (version 7624) CO-core models, presented in section#4.1. The only thing that changes between models is the CO-core mass, set by 'initial_mass' and the composition, set by 'accretion_species_xa(1)' and 'accretion_species_xa(2)'. In our grid, we covered the same mass and composition range as the KEPLER models, keeping the same mass increment but increasing the carbon mass increment from 0.01 to 0.05.
DOI: 10.5519/qd.px6gv44n
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (3 records)
DOI: 10.21227/nf73-7t66
title: Auscultatory and Oscillometry Blood Pressure Data

description: This data includes 350 Korotkoff sounds and their corresponding osciilometric waveforms, cuff pressure and detected systolic and diastolic pressures.
DOI: 10.17632/s2mhjb8hyk.1
title: MXE: A package for simulating long-term diffusive mass transport phenomena in nanoscale systems

description: We present a package to simulate long-term diffusive mass transport in systems with atomic scale resolution. The implemented framework is based on a non-equilibrium statistical thermo-chemo-mechanical formulation of atomic systems where effective transport rates are computed using a kinematic diffusion law. Our implementation is built as an add-on to the Large-scale Atomic/Molecular Massively Parallel Simulator (LAMMPS) code, it is compatible with other LAMMPS’ functionalities, and shows a good parallel scalability and efficiency. In applications involving diffusive mass transport, this framework is able to simulate problems of technological interest for exceedingly large time scales using an atomistic description, which are not reachable with the state-of-the-art molecular dynamics techniques. Several examples, involving complex diffusive behavior in materials, are investigated with the framework. We found good qualitative and quantitative comparison with known theories and models, with Monte Carlo methods, as well as with experimental results. Thus, our implementation can be used as a tool to understand diffusive behavior in materials where experimental characterization is difficult to perform.
DOI: 10.18112/openneuro.ds002778.v1.0.1
title: UC San Diego Resting State EEG Data from Patients with Parkinson's Disease
DOI: 10.17632/229bnpp8rb.1
title: A Bayesian traction force microscopy method with automated denoising in a user-friendly software package

description: Adherent biological cells generate traction forces on a substrate that play a central role for migration, mechanosensing, differentiation, and collective behavior. The established method for quantifying this cell–substrate interaction is traction force microscopy (TFM). In spite of recent advancements, inference of the traction forces from measurements remains very sensitive to noise. However, suppression of the noise reduces the measurement accuracy and the spatial resolution, which makes it crucial to select an optimal level of noise reduction. Here, we present a fully automated method for noise reduction and robust, standardized traction-force reconstruction. The method, termed Bayesian Fourier transform traction cytometry, combines the robustness of Bayesian L2 regularization with the computation speed of Fourier transform traction cytometry. We validate the performance of the method with synthetic and real data. The method is made freely available as a software package with a graphical user-interface for intuitive usage.
DOI: 10.17632/hswn9y67rn.4
title: Methodology for Conference Proceedings Assessment: a Conference Proceedings Dataset

description: This dataset represents the alternative approach to research evaluation based on conference proceedings data. It contains data of 171 conference proceedings in 15 subject areas. More than half of the proceedings belong to Computer Science and Engineering. An SJR-based approach allowed us to allocate the conference proceedings into categories Q1, Q2, Q3, Q4 by analogy with journal quartiles. We would like to stress the importance of using subject-specific quartiles for conferences because the significance of the same conference in different communities varies. Thus, a conference can belong to several subject areas and can have different quartiles there. Most high-quality conference proceedings are observed in Computer Science and Engineering. It is important to note that the list reflects only non-journal and non-book sources. We have evaluated conference proceedings, not the conferences themselves (exclusively bibliometric data are not enough to assess conferences). Such a quantitative assessment may be a convenient auxiliary tool, but it does not eliminate the need for expert evaluation.