cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23929716.v1
title: Cryoablation versus microwave ablation in the treatment of hepatocellular carcinoma

description: To evaluate the efficacy and safety of cryoablation (CRA) versus microwave ablation (MWA) for hepatocellular carcinoma (HCC).
DOI: 10.5517/ccdc.csd.cc1llxy1
title: CCDC 1477954: Experimental Crystal Structure Determination

description: Related Article: Professor Israel Agranat, Mala'bi Tahani, Hidmi Taghreed|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1llxwz
title: CCDC 1477952: Experimental Crystal Structure Determination

description: Related Article: Professor Israel Agranat, Mala'bi Tahani, Hidmi Taghreed|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1llxx0
title: CCDC 1477953: Experimental Crystal Structure Determination

description: Related Article: Professor Israel Agranat, Mala'bi Tahani, Hidmi Taghreed|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1llxvy
title: CCDC 1477951: Experimental Crystal Structure Determination

description: Related Article: Professor Israel Agranat, Mala'bi Tahani, Hidmi Taghreed|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25502/f0zc-ef81/d
title: Dataset on the Effects of Genotype, Location, and Planting Season on the Nutritional Composition and the Metabolizable Energy of Maize Hybrids

description: This study investigated the effects of genotype, location, and planting season on the advanced maize genotypes' proximate composition and metabolizable energy. Twenty-five hybrid maize genotypes and a local variety as control were harvested from five locations 100 days after planting for two seasons. The maize samples were sorted, cleaned and pulverized using a laboratory mill and were analyzed for nutritional compositions, total carbohydrates and metabolizable energy (ME) using standard laboratory methods. Moisture content, ash, fat, and protein had mean±sd 8.97±0.40%, 1.48±0.05%, 4.31±0.19, and 8.88±0.18 %, respectively. ME had a mean±sd of 379.77±2.17kJ while total carbohydrate had values ranging from 74.68 to 77.20%, with an average of 76.68%. Results showed that most of the variations expressed in the proximate compositions of the maize genotypes are not significantly (p>0.05) dependent on the genotypes. In contrast, locations significantly affected the maize genotypes' proximate and metabolizable energy (p0.05) of location by genotype interaction on the proximate and ME of the maize samples. The planting season also exhibited a significant (p<0.001) difference for all the proximate parameters. Fourteen out of the twenty-five maize hybrid genotypes were similar to the local variety in terms of proximate composition and metabolizable energy. Therefore, they could be recommended for advancement in the breeding stages for release for household and industrial uses.
DOI: 10.25934/00006104
title: Heterogeneous treatment effects in molecular phenotypes of sepsis

description: In the U.S. alone, sepsis is estimated to result in 1.7 million hospital admissions and 250,000 deaths annually, making it one of the leading causes of death, and at approximately 25%, remains unacceptably high. Antibiotics aside, no biological pharmacotherapy has been shown to improve outcomes in sepsis clinical trials. In part, these failures to find a therapeutic benefit has been attributed to the vast heterogeneity of patients captured by the non-specific definition of sepsis. As an example, an 18-year-old person with viral meningitis and a 90-year-old with an abdominal abscess could both meet criteria for sepsis and be enrolled in the same trial. It is highly likely that the response to infection and the treatments trialled in a study would be vastly different in these two patients and illustrate why several therapies have failed in sepsis. 

Increasingly, researchers are turning to the discipline of precision medicine, where through studies we aim to match the right patient to the right therapy. Our group are world leaders and experts in the field of precision medicine in critical care. In another heterogeneous critical care syndrome, called ARDS, we have consistently identified two distinct phenotypes (or subgroups) that have distinct biological characteristics and outcomes. More importantly, in analysis of three previously conducted trials, the phenotypes responded differently to the same therapies. In one group we observed benefit, whereas in another we observed harm. When the subgroups were analysed together as whole, however, the therapies were found to have no effect. These data suggest that many of previously discarded therapies may have a benefit in a select group of patients. 

In this study, we hypothesize that the same subgroups found in acute respiratory distress syndrome are also found in sepsis. We will used previously developed advanced data science (machine learning) predictor models to identify these two phenotypes in the PROWESS-SHOCK study of patients with sepsis. We will further test whether the treatment trialled in this study is beneficial in one group and harmful in another. This study will have broader impact in the field of precision medicine in critical care and may well help identify a subgroup of patients in which this life-saving treatment may be of benefit to a group of patients. The collective expertise of my group will help answer this important question in a condition that is associate with an unacceptably high mortality.
DOI: 10.25934/pr00007581
title: Collaboration Of Controlled Randomised trials of Oral Antithrombotic agents after intraCranial Haemorrhage (COCROACH)

description: What is this research about?

Stroke due to bleeding in the brain, known as brain haemorrhage, affects at least 3 million people in the world each year. People who survive brain haemorrhage are at risk of suffering another “major vascular event”. These major vascular events include heart attacks, strokes, and death due to clotting or bleeding problems. The risk of having a major vascular event is up about 8% each year after brain haemorrhage. Randomised controlled trials found that people with an iregular heart beat, known as atrial fibrillation (or AF for short) benefit from blood-thinning anticoagulant drugs.

Why are we doing this research?

Doctors aren’t sure whether anticoagulant drugs can be used for people with AF who have had a brain haemorrhage. A few, small randomised controlled trials of anticoagulant drugs have been done in patients with brain haemorrhage and AF. These include our SoSTART trial (203 patients), the APACHE-AF trial (101 patients), and the NASPAF-ICH trial (30 patients). However, these trials were small and none reached a conclusive result.

What will we do?

We will perform two different types of analysis by combining data from all completed randomised controlled trials of oral anticoagulation for AF after brain haemorrhage to get the most precise and reliable answer. As well as the three trials mentioned above, we want to include data from 80 patients with brain haemorrhage and AF, who were randomised between Edoxaban and placebo in the ELDERCARE-AF trial. That's why we are requesting data via Vivli from the ELDERCARE-AF trial.

What will this research mean?

These analyses will provide the most precise and reliable information about the effect of oral anticoagulation for AF after brain haemorrhage, which will inform the care of patients with this problem. We will publish the results in the Cochrane Library and in a peer-reviewed journal.
DOI: 10.5281/zenodo.7848819
title: Database for the surveillance of non-EU Tephritidae in the EU

description: This database was prepared in the context of the EFSA mandate on plant pest surveillance (M-2020-0114), at the request of the European Commission. Its purpose is to guide the Member States in preparing data and information for designing statistically sound and risk-based surveys of non-EU tephritid fruit flies (Diptera: Tephritidae) regulated as Union quarantine pests. This database provides information on taxonomy, distribution, biology, host range, and detection and identification of 254 species of non-EU Tephritidae belonging to the 75 taxa listed in Commission Implementing Regulation (EU) 2019/2072.  The database summarizes the information included in the eight crop-specific EFSA pest survey cards on non-EU Tephritidae, and is part of a package that includes eight crop-based survey cards and a guide for selecting the appropriate card for preparing surveys (EFSA et al., 2023).
description: EU; en; Xlsx; PLANTS@efsa.europa.eu
DOI: 10.5281/zenodo.7848820
title: Database for the surveillance of non-EU Tephritidae in the EU

description: This database was prepared in the context of the EFSA mandate on plant pest surveillance (M-2020-0114), at the request of the European Commission. Its purpose is to guide the Member States in preparing data and information for designing statistically sound and risk-based surveys of non-EU tephritid fruit flies (Diptera: Tephritidae) regulated as Union quarantine pests. This database provides information on taxonomy, distribution, biology, host range, and detection and identification of 254 species of non-EU Tephritidae belonging to the 75 taxa listed in Commission Implementing Regulation (EU) 2019/2072. The database summarizes the information included in the eight crop-specific EFSA pest survey cards on non-EU Tephritidae, and is part of a package that includes eight crop-based survey cards and a guide for selecting the appropriate card for preparing surveys (EFSA et al., 2023).
description: EU; en; Xlsx; PLANTS@efsa.europa.eu
DOI: 10.5281/zenodo.8119317
title: Database for the surveillance of non-EU Tephritidae in the EU

description: This database was prepared in the context of the EFSA mandate on plant pest surveillance (M-2020-0114), at the request of the European Commission. Its purpose is to guide the Member States in preparing data and information for designing statistically sound and risk-based surveys of non-EU tephritid fruit flies (Diptera: Tephritidae) regulated as Union quarantine pests. This database provides information on taxonomy, distribution, biology, host range, and detection and identification of 254 species of non-EU Tephritidae belonging to the 75 taxa listed in Commission Implementing Regulation (EU) 2019/2072.  The database summarizes the information included in the eight crop-specific EFSA pest survey cards on non-EU Tephritidae, and is part of a package that includes eight crop-based survey cards and a guide for selecting the appropriate card for preparing surveys (EFSA et al., 2023).
description: EU; en; Xlsx; PLANTS@efsa.europa.eu
DOI: 10.5281/zenodo.10017626
title: La Palma 2021 Automatic Solutions

description: automatic_catalogs:

gamma_picks: PhaseNet Picks used for GaMMA association
gamma_catalog: GaMMA hypocenter associations
not_earthquakes: Manually inspected false events from GaMMA Catalog
nlloc_catalog: NonLinLoc Hypocenter solutions in xml format redeable by obspy.read_events 
b_values_map:

Files in this folder corresponds to each projection in Latitude, Longitude and Depth obtained for the b-value spatial distribution. The files have the structure: Coordinate Coordinate b-value Completness Magnitude 
hypoDD_relocs:

Hypodd relocs file
hypoDD.in Configuration File to perform the relative relocation

Take into account the 3D model can locate earthquakes above the the sea level, therefore, we have shifted their depths and the 1D velocity model to perform the relocation. One the solutions are retrived we "unshift" the depths.  
ph2dt.in Configuration File to obtain de dt.cc file  
la_palma_3d_model

layer3d.P.mod.buf: La Palma Island 3D velocity Model buff file in NonLinLoc Format
layer3d.P.mod.hdr: La Palma Island 3D velocity Model Header in NonLinLoc Format 
time_series

b_value_time series: b-value and Completness Magnitud time series
cv_time_series: Cv parameter time series 
NLLoc 

nlloc_sample.in: Configuration file to perform the Absolute Location
DOI: 10.5281/zenodo.8131087
title: La Palma 2021 Automatic Solutions

description: automatic_catalogs:

gamma_picks: PhaseNet Picks used for GaMMA association
gamma_catalog: GaMMA hypocenter associations
not_earthquakes: Manually inspected false events from GaMMA Catalog
nlloc_catalog: NonLinLoc Hypocenter solutions in xml format redeable by obspy.read_events 
b_values_map:

Files in this folder corresponds to each projection in Latitude, Longitude and Depth obtained for the b-value spatial distribution. The files have the structure: Coordinate Coordinate b-value Completness Magnitude 
hypoDD_relocs:

Hypodd relocs file
hypoDD.in Configuration File to perform the relative relocation

Take into account the 3D model can locate earthquakes above the the sea level, therefore, we have shifted their depths and the 1D velocity model to perform the relocation. One the solutions are retrived we "unshift" the depths.  
ph2dt.in Configuration File to obtain de dt.cc file  
la_palma_3d_model

layer3d.P.mod.buf: La Palma Island 3D velocity Model buff file in NonLinLoc Format
layer3d.P.mod.hdr: La Palma Island 3D velocity Model Header in NonLinLoc Format 
time_series

b_value_time series: b-value and Completness Magnitud time series
cv_time_series: Cv parameter time series 
NLLoc 

nlloc_sample.in: Configuration file to perform the Absolute Location
DOI: 10.5281/zenodo.8131088
title: data_la_palma_automatic

description: <strong>automatic_catalogs:</strong> gamma_catalog: GaMMA hypocenter associations nlloc_catalog: NonLinLoc Hypocenter solutions in xml format redeable by obspy.read_events<br> <strong>b_values_map:</strong> Files in this folder corresponds to each projection in Latitude, Longitude and Depth obtained for the b-value spatial distribution. The files have the structure: Coordinate Coordinate b-value Completness Magnitude<br> <strong>hypoDD_relocs:</strong> Hypodd relocs file<br> <strong>la_palma_3d_model</strong> layer3d.P.mod.buf: La Palma Island 3D velocity Model buff file in NonLinLoc Format layer3d.P.mod.hdr: La Palma Island 3D velocity Model Header in NonLinLoc Format<br> <strong>time_series</strong> <strong></strong>b_value_time series: b-value and Completness Magnitud time series cv_time_series: Cv parameter time series
DOI: 10.5281/zenodo.8134248
title: data_la_palma_automatic

description: <strong>automatic_catalogs:</strong> gamma_picks: PhaseNet Picks used for GaMMA association gamma_catalog: GaMMA hypocenter associations not_earthquakes: Manually inspected false events from GaMMA Catalog nlloc_catalog: NonLinLoc Hypocenter solutions in xml format redeable by obspy.read_events<br> <strong>b_values_map:</strong> Files in this folder corresponds to each projection in Latitude, Longitude and Depth obtained for the b-value spatial distribution. The files have the structure: Coordinate Coordinate b-value Completness Magnitude<br> <strong>hypoDD_relocs:</strong> Hypodd relocs file<br> <strong>la_palma_3d_model</strong> layer3d.P.mod.buf: La Palma Island 3D velocity Model buff file in NonLinLoc Format layer3d.P.mod.hdr: La Palma Island 3D velocity Model Header in NonLinLoc Format<br> <strong>time_series</strong> b_value_time series: b-value and Completness Magnitud time series cv_time_series: Cv parameter time series
DOI: 10.5517/ccdc.csd.cc281f5y
title: CCDC 2086739: Experimental Crystal Structure Determination

description: Related Article: Meng-Xia Ma, Xue-Li Ma, Guang-Ming Liang, Xue-Tao Shen, Qing-Ling Ni, Liu-Cheng Gui, Xiu-Jian Wang, Si-Yu Huang, Shi-Ming Li|2021|J.Am.Chem.Soc.|143|13731|doi:10.1021/jacs.1c05618
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10017617
title: Test
DOI: 10.5281/zenodo.10017657
title: Test
DOI: 10.5517/ccdc.csd.cc2cnh7s
title: CCDC 2194435: Experimental Crystal Structure Determination

description: Related Article: Parthasarathy Gayathri, Periyappan Nantheeswaran, Mariappan Mariappan, Subramanian Karthikeyan, Mehboobali Pannipara, Abdullah G. Al-Sehemi, Dohyun Moon, Savarimuthu Philip Anthony|2023|Spectrochim.Acta,Part A|286|121989|doi:10.1016/j.saa.2022.121989
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2cnh9v
title: CCDC 2194437: Experimental Crystal Structure Determination

description: Related Article: Parthasarathy Gayathri, Periyappan Nantheeswaran, Mariappan Mariappan, Subramanian Karthikeyan, Mehboobali Pannipara, Abdullah G. Al-Sehemi, Dohyun Moon, Savarimuthu Philip Anthony|2023|Spectrochim.Acta,Part A|286|121989|doi:10.1016/j.saa.2022.121989
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.10017616
title: Test
DOI: 10.5517/ccdc.csd.cc2d1st2
title: CCDC 2206264: Experimental Crystal Structure Determination

description: Related Article: Duo-Fu Li, Feng Guo, Xiao-Li He, Yao-Zhen Wu, Xiang-Hong Deng, Kang-Ping Yang, Yan Sui, Yong-Xiu Li|2022|CrystEngComm|24|8496|doi:10.1039/D2CE01297A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g4885
title: CCDC 2268216: Experimental Crystal Structure Determination

description: Related Article: Brendan F. Abrahams, Christopher J. Commons, Timothy A. Hudson|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fys28
title: CCDC 2262940: Experimental Crystal Structure Determination

description: Related Article: Kohei Yamaguchi, Yuya Uemura, Hideki Sugimoto, Rin Ito, Yuma Morimoto, Shinobu Itoh|2023|Cat.Sci.Tech.|13|5859|doi:10.1039/D3CY00944K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2fjf3j
title: CCDC 2250107: Experimental Crystal Structure Determination

description: Related Article: Sheng-Rong He, Han Xu, Cheng Chen, Xue-Tao Wang, Tian-Qi Lu, Lingyun Cao, Jun Zheng, Xiu-Ying Zheng|2023|Nanoscale|15|15730|doi:10.1039/D3NR03302C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.18112/openneuro.ds004808.v1.0.0
title: Brainstem fMRI signaling of surprise across different types of deviant stimuli
DOI: 10.5281/zenodo.10017671
title: Test Restricted
DOI: 10.5281/zenodo.10017670
title: Test Restricted
DOI: 10.6084/m9.figshare.24339823
title: PacBio fasta files - chr 2 Atlantic cod

description: 79 breakpoint regions witin chromsome 2 of the Atltantic cod was sequenced using HiFi-sequencing, which creates accurate long reads known as HiFi reads. In doing so, I could use multiple, accurate, HiFi sequencing reads to (1) align each breakpoint read to the gadmor3 and coastal reference genome and then (2) make de novo haplotype assemblies for the breakpoint regions for different individuals with the inverted and non-inverted allele. The haplotype assemblies were used in a multiple sequence alignment, and I could pinpoint where the breakpoints are and that they are conserved and fixed within and between populations.<br><br>Here I´ve uploaded the fasta files that were used in making de novo haplotype assemblies.
DOI: 10.5285/9da2a537-b8f5-4520-bed8-5c629dce0bd9
title: UKGEOS Glasgow groundwater and surface water chemistry dataset release (2021–2022)

description: The data release includes surface and groundwater chemistry data from 99 samples (33 surface water, 60 groundwater, and 6 groundwater duplicates) collected during the baseline water monitoring at the UK Geoenergy Observatories (UKGEOS) Glasgow facility. This release from the British Geological Survey (BGS) covers surface and groundwater samples collected between 22 June 2021 and 28 January 2022 from 6 surface water sites, 5 mine water boreholes, and 5 environmental monitoring boreholes. The samples were then analysed for the concentrations of selected parameters at BGS and other laboratories. It contains a report and 2 data sheets GroundWaterChemData2 and SurfaceWaterChemData3.
DOI: 10.5517/ccdc.csd.cc13286n
title: CCDC 1015070: Experimental Crystal Structure Determination

description: Related Article: Sihyun Oh, Narae Jung, Jongwon Lee, Jinho Kim, Ki-Min Park, Youngjin Kang|2014|Bull.Korean Chem.Soc.|35|3590|doi:10.5012/bkcs.2014.35.12.3590
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.