cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.11438153
title: Data from: "Eddington envelopes: The fate of stars on parabolic orbits tidally disrupted by supermassive black holes" (Price et al. 2024)

description: The paper by Price et al. (2024; arXiv:2404.09381) simulates the tidal disruption of a one solar mass polytropic star by a million-solar-mass supermassive black hole, using the Phantom general relativistic smoothed particle hydrodynamics code (Price et al. 2018). The code used to perform the simulations is available at:

https://github.com/danieljprice/phantom

This dataset contains:



Scripts, intermediate data products and other small files used to create each figure in the paper

Selected snapshots and other raw data from the four main calculations shown in the paper


The main datasets contain parameter files and snapshots from the simulations used to create figures in the paper.small data files from the simulations and post-processing scripts used to create the scientific results and figures shown in the paper. Each simulation dataset contains:

.setup file: parameter file used by phantomsetup to create the initial conditions for the star itself.in file: parameter file used by phantom to perform the calculationtde_00000, tde_00100, tde_00200 etc: binary code snapshots containing raw data (particle positions, velocities, thermal energy, etc), these can be read/visualised/converted using the free and open source codes SPLASH (Price et al. 2007):https://github.com/danieljprice/splash

or Sarracen:

https://github.com/ttricco/sarracen

SPLASH was used to create figures in the paper. The format and ways to read these data files are described in:

https://phantomsph.readthedocs.io/en/latest/user-guide/dumpfile.html

tde01.ev, tde02.ev etc: ascii files (see header) containing global quantities like total angular momentum, total momentum, total energy etc as a function of time. Each number corresponds to a restart of the code (i.e. resubmission of the job to the queue on the cluster).

tde01.log, tde02.log: output log from the simulations themselves, this contains some useful information like the unit scalings, typical timestep and code performance, hardware information etc.

.defaults, .limits, .units and .filenames: parameter files used by SPLASH to create particular figures. For example, to use the files lightcurve.defaults, lightcurve.units, lightcurve.limits and lightcurve.filenames one would plot using splash -p lightcurve

The relevant raw data directories are:

beta1_hres: raw data from the adiabatic, beta=1 calculation

beta5_hres: raw data from the adiabatic, beta=5 calculation

beta1_isentropic: raw data from the isentropic, beta=1 calculation with a non-spinning black hole

beta1_isentropic_kerr_a99_i60: raw data from the isentropic, beta=1 calculation with a maximally-spinning black hole with the initial stellar orbit at an incliation of 60 degrees to the black hole spin

The procedure to recreate each figure and post-processing analysis used in the paper is explained in the README.md placed in each directory unpacked from the figureX.zip file
DOI: 10.5281/zenodo.11438154
title: Data from: "Eddington envelopes: The fate of stars on parabolic orbits tidally disrupted by supermassive black holes" (Price et al. 2024)

description: The paper by Price et al. (2024; arXiv:2404.09381) simulates the tidal disruption of a one solar mass polytropic star by a million-solar-mass supermassive black hole, using the Phantom general relativistic smoothed particle hydrodynamics code (Price et al. 2018). The code used to perform the simulations is available at:

https://github.com/danieljprice/phantom

This dataset contains:



Scripts, intermediate data products and other small files used to create each figure in the paper

Selected snapshots and other raw data from the four main calculations shown in the paper


The main datasets contain parameter files and snapshots from the simulations used to create figures in the paper.small data files from the simulations and post-processing scripts used to create the scientific results and figures shown in the paper. Each simulation dataset contains:

.setup file: parameter file used by phantomsetup to create the initial conditions for the star itself.in file: parameter file used by phantom to perform the calculationtde_00000, tde_00100, tde_00200 etc: binary code snapshots containing raw data (particle positions, velocities, thermal energy, etc), these can be read/visualised/converted using the free and open source codes SPLASH (Price et al. 2007):https://github.com/danieljprice/splash

or Sarracen:

https://github.com/ttricco/sarracen

SPLASH was used to create figures in the paper. The format and ways to read these data files are described in:

https://phantomsph.readthedocs.io/en/latest/user-guide/dumpfile.html

tde01.ev, tde02.ev etc: ascii files (see header) containing global quantities like total angular momentum, total momentum, total energy etc as a function of time. Each number corresponds to a restart of the code (i.e. resubmission of the job to the queue on the cluster).

tde01.log, tde02.log: output log from the simulations themselves, this contains some useful information like the unit scalings, typical timestep and code performance, hardware information etc.

.defaults, .limits, .units and .filenames: parameter files used by SPLASH to create particular figures. For example, to use the files lightcurve.defaults, lightcurve.units, lightcurve.limits and lightcurve.filenames one would plot using splash -p lightcurve

The relevant raw data directories are:

beta1_hres: raw data from the adiabatic, beta=1 calculation

beta5_hres: raw data from the adiabatic, beta=5 calculation

beta1_isentropic: raw data from the isentropic, beta=1 calculation with a non-spinning black hole

beta1_isentropic_kerr_a99_i60: raw data from the isentropic, beta=1 calculation with a maximally-spinning black hole with the initial stellar orbit at an incliation of 60 degrees to the black hole spin

The procedure to recreate each figure and post-processing analysis used in the paper is explained in the README.md placed in each directory unpacked from the figureX.zip file
DOI: 10.5281/zenodo.10910103
title: Isosceles paper reference and report data

description: Reference and report data for the Isosceles paper - more details can be found in the Isosceles_Paper repository.
DOI: 10.5281/zenodo.8180604
title: Isosceles paper reference and report data

description: Reference and report data for the Isosceles paper - more details can be found in the Isosceles_Paper repository.
DOI: 10.5281/zenodo.8180605
title: Isosceles paper reference and report data

description: Reference and report data for the Isosceles paper - more details can be found in the Isosceles_paper repository.
DOI: 10.5281/zenodo.10895894
title: Isosceles paper simulated ovarian cell line ONT data (scRNA-Seq)

description: Simulated ovarian cell line ONT data (scRNA-Seq) for the Isosceles paper - more details can be found in the Isosceles_Paper repository.
DOI: 10.5281/zenodo.10895895
title: Isosceles paper simulated ovarian cell line ONT data (scRNA-Seq)

description: Simulated ovarian cell line ONT data (scRNA-Seq) for the Isosceles paper - more details can be found in the Isosceles_Paper repository.
DOI: 10.5281/zenodo.10895722
title: Isosceles paper simulated ovarian cell line ONT data (bulk RNA-Seq)

description: Simulated ovarian cell line ONT data (bulk RNA-Seq) for the Isosceles paper - more details can be found in the Isosceles_Paper repository.
DOI: 10.5281/zenodo.10895721
title: Isosceles paper simulated ovarian cell line ONT data (bulk RNA-Seq)

description: Simulated ovarian cell line ONT data (bulk RNA-Seq) for the Isosceles paper - more details can be found in the Isosceles_Paper repository.
DOI: 10.15468/dl.x6v3sb
title: Occurrence Download

description: A dataset containing 11171390 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Chile"
 ]
}

 The dataset includes 11171390 records from 2057 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018571-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.57afv3
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bromus pellitus Hack."
 ]
}

 The dataset includes 34 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100940-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wtwatp
title: Occurrence Download

description: A dataset containing 1026 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bromus pectinatus Thunb."
 ]
}

 The dataset includes 1026 records from 67 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100939-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.czj45k
title: Occurrence Download

description: A dataset containing 471 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bromus polyanthus Scribn. ex Shear"
 ]
}

 The dataset includes 471 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100945-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f4exsc
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tanacetum hololeucum (Bornm.) Podlech"
 ]
}

 The dataset includes 20 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004774-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hwm3he
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sporobolus pectinatus Hack."
 ]
}

 The dataset includes 91 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0139912-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ye9h8f
title: Occurrence Download

description: A dataset containing 2505 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Agrilus planipennis Fairmaire, 1888"
 ]
}

 The dataset includes 2505 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100951-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.72628
title: CACHETTE DE KARNAK - CK_393_nu_2006_11025

description: Référence : nu_2006_11025<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.15468/dl.99t4am
title: Occurrence Download

description: A dataset containing 760 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tetrapogon villosus Desf."
 ]
}

 The dataset includes 760 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011441-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.72627
title: CACHETTE DE KARNAK - CK_393_nu_2006_11024

description: Référence : nu_2006_11024<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.15468/dl.y8uk3k
title: Occurrence Download

description: A dataset containing 1942 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Viola walteri House"
 ]
}

 The dataset includes 1942 records from 80 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032466-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z8427p
title: Occurrence Download

description: A dataset containing 212 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sclerophrys latifrons (Boulenger, 1900)"
 ]
}

 The dataset includes 212 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0303351-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.72626
title: CACHETTE DE KARNAK - CK_393_nu_2006_11023

description: Référence : nu_2006_11023<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.15468/dl.gfurs2
title: Occurrence Download

description: A dataset containing 121 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bromus plurinodis Keng"
 ]
}

 The dataset includes 121 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0100944-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.skcjxr
title: Occurrence Download

description: A dataset containing 634 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sporobolus pectinellus Mez"
 ]
}

 The dataset includes 634 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0139914-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.72625
title: CACHETTE DE KARNAK - CK_393_nu_2006_11022

description: Référence : nu_2006_11022<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.15468/dl.x7xcw7
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((12.75954 -19.48528,55.24046 -19.48528,55.24046 -2.51472,12.75954 -2.51472,12.75954 -19.48528))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ludwigia speciosa (Brenan) Hoch, Goldblatt & P.H.Raven"
 ]
}

 The dataset includes 7 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0167364-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yjenms
title: Occurrence Download

description: A dataset containing 91 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Japan",
 "TaxonKey is Verbascum blattaria L."
 ]
}

 The dataset includes 91 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0139896-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zsrjr8
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sporobolus oxyphyllus Fish"
 ]
}

 The dataset includes 19 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0139899-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.72624
title: CACHETTE DE KARNAK - CK_393_nu_2006_11021

description: Référence : nu_2006_11021<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.15468/dl.8uj535
title: Occurrence Download

description: A dataset containing 17388 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Amelanchier humilis Wiegand",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is False",
 "DecimalLatitude is less than 90",
 "DecimalLongitude is less than 180",
 "DecimalLatitude is greater than -90",
 "DecimalLongitude is greater than -180"
 ]
}

 The dataset includes 17388 records from 160 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008892-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s2jv3y
title: Occurrence Download

description: A dataset containing 10095 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Scabiosa ochroleuca L.",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is False",
 "DecimalLatitude is less than 90",
 "DecimalLongitude is less than 180",
 "DecimalLatitude is greater than -90",
 "DecimalLongitude is greater than -180"
 ]
}

 The dataset includes 10095 records from 152 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008893-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.72623
title: CACHETTE DE KARNAK - CK_393_nu_2006_11020

description: Référence : nu_2006_11020<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.15468/dl.rv5ksp
title: Occurrence Download

description: A dataset containing 4926 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Asplenium petrarchae (Guérin) DC.",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is False",
 "DecimalLatitude is less than 90",
 "DecimalLongitude is less than 180",
 "DecimalLatitude is greater than -90",
 "DecimalLongitude is greater than -180"
 ]
}

 The dataset includes 4926 records from 99 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008896-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.72622
title: CACHETTE DE KARNAK - CK_393_nu_2006_11019

description: Référence : nu_2006_11019<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.15468/dl.uzgtjx
title: Occurrence Download

description: A dataset containing 51050 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Potentilla crantzii (Crantz) Beck ex Fritsch",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 51050 records from 325 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003141-240130105604617/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34816/ifao.archives.72621
title: CACHETTE DE KARNAK - CK_393_nu_2006_11018

description: Référence : nu_2006_11018<br />Site : Karnak<br />Type : photographie<br />
DOI: 10.15468/dl.2uae7t
title: Occurrence Download

description: A dataset containing 839492 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ciconia ciconia (Linnaeus, 1758))",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 839492 records from 657 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0236731-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s6hwjp
title: Occurrence Download

description: A dataset containing 693032 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Quercus suber L.)",
 "HasCoordinate is true",
 "Geometry POLYGON ((25.280527 74.385866, 34 74.516506, 34 35.773364, 32.861584 35.588421, 26.375071 34.609982, 22.816449 34.504241, 13.627633 36.690862, 10.001544 38.719154, -0.356862 36.404548, -9.323257 35.627079, -12.292937 57.408982, 25.280527 74.385866))"
 ]
}

 The dataset includes 693032 records from 231 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010958-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pps5yn
title: Occurrence Download

description: A dataset containing 60 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Erica inamoena Dulfer"
 ]
}

 The dataset includes 60 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044206-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bnaxy6
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Canthigaster rostrata (Bloch, 1786)",
 "Country is Colombia"
 ]
}

 The dataset includes 71 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027002-151016162008034/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7t8mhe
title: Occurrence Download

description: A dataset containing 24587 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eichhornia crassipes (Mart.) Solms"
 ]
}

 The dataset includes 24587 records from 609 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044147-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.66rc3y
title: Occurrence Download

description: A dataset containing 1438 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Machine Observation, Human Observation, Material citation, Material sample)",
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "Geometry POLYGON((-10.93864 35.70783,36.75821 34.81566,50.27804 39.13926,40.25826 76.4732,-12.92887 63.70829,-10.93864 35.70783))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ursus arctos Linnaeus, 1758",
 "Year 2002-2023"
 ]
}

 The dataset includes 1438 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0015002-231120084113126/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.