cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh109758.07fu
title: SH109758.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh109759.07fu
title: SH109759.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh109760.07fu
title: SH109760.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh109761.07fu
title: SH109761.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh109762.07fu
title: SH109762.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh109763.07fu
title: SH109763.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh109764.07fu
title: SH109764.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh109765.07fu
title: SH109765.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh109766.07fu
title: SH109766.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh109767.07fu
title: SH109767.07FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3886/e171561
title: Choosing Wisely for Emergency Physicians in Taiwan

description: In 2012, the American Board of Internal Medicine Foundation launched the Choosing Wisely campaign to reduce unnecessary care. However, it is unclear how much emergency physicians in Taiwan understand about Choosing Wisely. The purpose of this study was to explore the knowledge, attitude, and behaviour of emergency physicians in Taiwan regarding Choosing Wisely and its related factors; the intention was to identify the baseline knowledge on the basis of which to promote Choosing Wisely in Taiwan.
description: N/A.
description: Response Rates: Since the responses were all from the online survey, there is no information regarding how many emergency physicians actually clicked the questionnaire linkage in order to estimate response rate. But all of the responses were valid questionnaires.
description: Presence of Common Scales: A Likert-type scale was used.
description: Through online survey to contact Emergency Physicians in Taiwan.
description: Emergency Physicians in Taiwan. Smallest Geographic Unit: N/A
description: web-based survey;
DOI: 10.3886/e171561v1
title: Choosing Wisely for Emergency Physicians in Taiwan

description: In 2012, the American Board of Internal Medicine Foundation launched the Choosing Wisely campaign to reduce unnecessary care. However, it is unclear how much emergency physicians in Taiwan understand about Choosing Wisely. The purpose of this study was to explore the knowledge, attitude, and behaviour of emergency physicians in Taiwan regarding Choosing Wisely and its related factors; the intention was to identify the baseline knowledge on the basis of which to promote Choosing Wisely in Taiwan.
description: N/A.
description: Response Rates: Since the responses were all from the online survey, there is no information regarding how many emergency physicians actually clicked the questionnaire linkage in order to estimate response rate. But all of the responses were valid questionnaires.
description: Presence of Common Scales: A Likert-type scale was used.
description: Through online survey to contact Emergency Physicians in Taiwan.
description: Emergency Physicians in Taiwan. Smallest Geographic Unit: N/A
description: web-based survey;
DOI: 10.5281/zenodo.6601957
title: Data for: Holocene history of the landscape at the biogeographical and cultural crossroads between Central and Eastern Europe (Western Podillia, Ukraine)

description: <strong>Here, we publish the working data sheets for individual proxies (pollen, plant macrofossils, mollusc and geochemical composition), which was used for paleoecological diagrams in the paper Hájková et al. in Quaternary Science Reviews. </strong>
DOI: 10.5281/zenodo.6601956
title: Data for: Holocene history of the landscape at the biogeographical and cultural crossroads between Central and Eastern Europe (Western Podillia, Ukraine)

description: <strong>Here, we publish the working data sheets for individual proxies (pollen, plant macrofossils, mollusc and geochemical composition), which was used for paleoecological diagrams in the paper Hájková et al. in Quaternary Science Reviews. </strong>
DOI: 10.6084/m9.figshare.19947440.v1
title: Long-noncoding RNA HOXA transcript at the distal tip ameliorates the insulin resistance and hepatic gluconeogenesis in mice with gestational diabetes mellitus via the microRNA-423-5p/wingless-type MMTV integration site family member 7A axis

description: Long-noncoding RNA HOXA transcript at the distal tip (HOTTIP) has been probed to exert essential effects on diabetes progression, while its function in gestational diabetes mellitus (GDM) remains unclear. This study was committed to unravel the effects of HOTTIP on GDM progression via the microRNA (miR)-423-5p/wingless-type MMTV integration site family member 7A (WNT7A) axis. The GDM mouse model was established. HOTTIP, miR-423-5p and WNT7A levels in GDM mice were examined. The saline with dissolved various constructs altering HOTTIP, miR-423-5p and WNT7A expression was injected into GDM mice to detect the levels of GDM‐related biochemical indices, HOMA indices, liver gluconease: expression levels of phosphoenolpyruvate carboxykinase (PEPCK), glucose-6-phosphatase (G-6-Pase), glucose transporter 2 (GLUT2) and pathological changes of pancreatic tissues, and the apoptosis rate of pancreatic cells in GDM mice. The relations among HOTTIP, miR-423-5p and WNT7A were validated. HOTTIP and WNT7A levels were decreased while miR-423-5p was elevated in GDM mice. The enriched HOTTIP or silenced miR-423-5p alleviated the levels of GDM‐relatedbiochemical indices, enhanced the insulin homeostasis, elevated GLUT2 expression and decreased G-6-pase and PEPCK expression, mitigated the pathological changes of pancreatic tissues, and hindered the apoptosis of pancreatic cells. MiR-143-5p upregulation abrogated the effects of elevated HOTTIP on repressing GDM; whereas WNT7A deletion reversed the therapeutic effects of reduced miR-423-5p. HOTTIP sponged miR-423-5p that targeted WNT7A. HOTTIP ameliorates insulin resistance and hepatic gluconeogenesis in GDM mice via the modulation of the miR-423-5p/WNT7A axis. This study affords novel therapeutic modalities for GDM treatment.
DOI: 10.6084/m9.figshare.19947440
title: Long-noncoding RNA HOXA transcript at the distal tip ameliorates the insulin resistance and hepatic gluconeogenesis in mice with gestational diabetes mellitus via the microRNA-423-5p/wingless-type MMTV integration site family member 7A axis

description: Long-noncoding RNA HOXA transcript at the distal tip (HOTTIP) has been probed to exert essential effects on diabetes progression, while its function in gestational diabetes mellitus (GDM) remains unclear. This study was committed to unravel the effects of HOTTIP on GDM progression via the microRNA (miR)-423-5p/wingless-type MMTV integration site family member 7A (WNT7A) axis. The GDM mouse model was established. HOTTIP, miR-423-5p and WNT7A levels in GDM mice were examined. The saline with dissolved various constructs altering HOTTIP, miR-423-5p and WNT7A expression was injected into GDM mice to detect the levels of GDM‐related biochemical indices, HOMA indices, liver gluconease: expression levels of phosphoenolpyruvate carboxykinase (PEPCK), glucose-6-phosphatase (G-6-Pase), glucose transporter 2 (GLUT2) and pathological changes of pancreatic tissues, and the apoptosis rate of pancreatic cells in GDM mice. The relations among HOTTIP, miR-423-5p and WNT7A were validated. HOTTIP and WNT7A levels were decreased while miR-423-5p was elevated in GDM mice. The enriched HOTTIP or silenced miR-423-5p alleviated the levels of GDM‐relatedbiochemical indices, enhanced the insulin homeostasis, elevated GLUT2 expression and decreased G-6-pase and PEPCK expression, mitigated the pathological changes of pancreatic tissues, and hindered the apoptosis of pancreatic cells. MiR-143-5p upregulation abrogated the effects of elevated HOTTIP on repressing GDM; whereas WNT7A deletion reversed the therapeutic effects of reduced miR-423-5p. HOTTIP sponged miR-423-5p that targeted WNT7A. HOTTIP ameliorates insulin resistance and hepatic gluconeogenesis in GDM mice via the modulation of the miR-423-5p/WNT7A axis. This study affords novel therapeutic modalities for GDM treatment.
DOI: 10.34740/kaggle/dsv/3684278
title: Footpath Image Dataset
DOI: 10.6084/m9.figshare.19947434
title: Power-law scaling and its spatial disparity

description: These are datasets for figures and tables for the article 'Power-law scaling and its spatial disparity in nationwide industrial regions'
DOI: 10.6084/m9.figshare.19947434.v1
title: Power-law scaling and its spatial disparity

description: These are datasets for figures and tables for the article 'Power-law scaling and its spatial disparity in nationwide industrial regions'
DOI: 10.5281/zenodo.6558331
title: Dataset for 'Massive warming-induced carbon loss from subalpine grassland soils in an altitudinal transplantation experiment' Volk et al. 2022

description: These files contain the essential data used to produce the above paper
DOI: 10.5281/zenodo.6558330
title: Dataset for 'Massive warming-induced carbon loss from subalpine grassland soils in an altitudinal transplantation experiment' Volk et al. 2022

description: These files contain the essential data used to produce the above paper
DOI: 10.6084/m9.figshare.14722308.v1
title: Additional file 24 of N6-methyladenosine RNA modification regulates strawberry fruit ripening in an ABA-dependent manner

description: Additional file 24: Table S23. Ripening-related genes containing hypomethylated m6A peaks in the MTA RNAi fruits compared to the control.
DOI: 10.6084/m9.figshare.14722314
title: Additional file 2 of N6-methyladenosine RNA modification regulates strawberry fruit ripening in an ABA-dependent manner

description: Additional file 2: Table S1. A summary of m6A-seq information in strawberry fruit at different stages.
DOI: 10.6084/m9.figshare.14722320.v1
title: Additional file 4 of N6-methyladenosine RNA modification regulates strawberry fruit ripening in an ABA-dependent manner

description: Additional file 4: Table S3. Confident m6A peaks identified by three independent m6A-seq experiments in strawberry fruit at RS1 stage.
DOI: 10.6084/m9.figshare.6858530.v1
title: MOESM6 of Engineering TATA-binding protein Spt15 to improve ethanol tolerance and production in Kluyveromyces marxianus

description: Additional file 6. KEGG enrichment of differentially expressed genes for M2 vs SPT15.
DOI: 10.6084/m9.figshare.7386275.v1
title: MOESM4 of Evaluation of the prognostic value of paraoxonase 1 in the recurrence and metastasis of hepatocellular carcinoma and establishment of a liver-specific predictive model of survival

description: Additional file 4. Univariate and multivariate Cox proportional-hazard regression analysis for overall survivalin TCGA dataset (HCC).
DOI: 10.6084/m9.figshare.18393213.v1
title: Additional file 2 of Integrated analysis of long non-coding RNAs and mRNAs reveals the regulatory network of maize seedling root responding to salt stress

description: Additional file 2: Table S1. Sequencing and mapping statistics for each sample. Table S2. Annotations of novel mRNAs. Table S3. Primer sequences for qRT-PCR. Table S4. Predicted TFs in the DEMs. Table S5. Cis-target transcripts of DELs. Table S6. Trans-target transcripts of DELs. Table S7. KEGG enrichment analysis for target mRNAs. Table S8. GO enrichment analysis for target mRNAs. Table S9. Expressions of DETs for WGCNA. Table S10. The 19 co-expressed genes of the bHLH TF, which contained bHLH binding motifs. Table S11. Prediction of lncRNA acting as miRNA decoys. Table S12. Identification of DELs acting as miRNA targets.
DOI: 10.57967/hf/1343
title: Israel-palestine-war
DOI: 10.6084/m9.figshare.21542154
title: Dataset for Functional Ecology.xls

description: This dataset is for the paper "<strong>Plant and soil biodiversity are essential for supporting highly multifunctional forests during Mediterranean rewilding</strong>" on Functional Ecology.
DOI: 10.6084/m9.figshare.10116557
title: Weibo data collected by the experiment from Endogenetic structure of filter bubble in social networks.

description: The filter bubble is an intermediate structure to provoke polarization and echo chambers in social networks, and it has become one of today's most urgent issues for social media. Previous studies usually equated filter bubbles with community structures and emphasized this exogenous isolation effect, but there is a lack of full discussion of the internal organization of filter bubbles. Here, we design an experiment for analysing filter bubbles taking advantage of social bots. We deployed 128 bots to Weibo (the largest microblogging network in China), and each bot consumed a specific topic (entertainment or sci-tech) and ran for at least two months. In total, we recorded about 1.3 million messages exposed to these bots and their social networks. By analysing the text received by the bots and motifs in their social networks, we found that a filter bubble is not only a dense community of users with the same preferences but also presents an endogenetic unidirectional star-like structure. The structure could spontaneously exclude non-preferred information and cause polarization. Moreover, our work proved that the felicitous use of artificial intelligence technology could provide an useful experimental approach that combines privacy protection and controllability in studying social media.
DOI: 10.6084/m9.figshare.18393051.v1
title: Additional file 3 of Whole-Genome Sequencing of 117 Chromosome Segment Substitution Lines for Genetic Analyses of Complex Traits in Rice

description: Additional file 3. Table S2 Primer pairs of 396 InDel markers.