cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30089995
title: Data for a plant silicon experiment studying rapid induction of silicon defences in cereal crops.

description: The data enclosed were used for the below research<br>Plant silicon has been touted as an important trait for sustainable agricultural production, due to its broad spectrum benefits and ubiquity in the environment. Recent research has shown that silicon content may increase rapidly with herbivory cues, suggestive of a plant defence response. Induced silicon defences may have potential applications to sustainable pest management in agriculture, yet the generality of this plant response, including in domesticated crops, remains unknown. We tested short-term (18hr) silicon accumulation in response to herbivory cues in four cereal crops by applying simulated (methyl-jasmonate) and cricket herbivory and comparing induced leaf silicon concentration to plants that did not experience an herbivory treatment. We found short-term silicon accumulation in three of the species, but only in response to methyl-jasmonate. In wheat, we observed the lowest silicon concentrations in cricket-damaged plants, explainable based on our current knowledge of plant silicon dynamics. Future silicon-herbivore studies should aim to move from the greenhouse to the field, testing how reliable patterns of herbivore-induced silicon accumulation are in field production.<br><br>
DOI: 10.6084/m9.figshare.30089995.v1
title: Data for a plant silicon experiment studying rapid induction of silicon defences in cereal crops.

description: The data enclosed were used for the below research<br>Plant silicon has been touted as an important trait for sustainable agricultural production, due to its broad spectrum benefits and ubiquity in the environment. Recent research has shown that silicon content may increase rapidly with herbivory cues, suggestive of a plant defence response. Induced silicon defences may have potential applications to sustainable pest management in agriculture, yet the generality of this plant response, including in domesticated crops, remains unknown. We tested short-term (18hr) silicon accumulation in response to herbivory cues in four cereal crops by applying simulated (methyl-jasmonate) and cricket herbivory and comparing induced leaf silicon concentration to plants that did not experience an herbivory treatment. We found short-term silicon accumulation in three of the species, but only in response to methyl-jasmonate. In wheat, we observed the lowest silicon concentrations in cricket-damaged plants, explainable based on our current knowledge of plant silicon dynamics. Future silicon-herbivore studies should aim to move from the greenhouse to the field, testing how reliable patterns of herbivore-induced silicon accumulation are in field production.<br><br>
DOI: 10.3535/a6x-1dn-sbz
title: Calicium viride Pers.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/lvx-3hk-xtx
title: Calicium viride Pers.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/wpq-kdv-c17
title: Calicium viride Pers.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/7bx-j25-ls4
title: Catinaria neuschildii (Körb.) P. James

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.17632/8h9kpmprvc
title: Virtual CoachII

description: Dataset Description
• Size: 603 respondents × 76 variables.
• Respondents: Adult Nepalese individuals who have used AI-driven fitness apps for at least one month.
• Demographics: Includes gender, age group, academic qualification, types of fitness apps used, exercise habits, and duration of use.
• Study Variables:
o Independent Variables (IVs): Perceived Privacy (PP), Anthropomorphism (AP), Perceived Empathy (PE), Perceived Joy (PJ), Perceived Usefulness (PU).
o Moderating Variables (MVs): Health Behavior Changes (HBC), Perceived Trustworthiness (PT).
o Dependent Variable (DV): Health and Well-being (HW).
• Indicators: Each latent construct is measured using multiple observed items (Likert scale: 1 = strongly disagree, 5 = strongly agree).
• Data Preparation:
o Raw item-level responses (PP_1 to HW_6).
o Computed mean scores for constructs (e.g., PP, AP, PU, HW).
o Standardized z-scores (e.g., ZPerceived_Privacy, ZHealth_and_Well_being).
o Interaction terms (Inter_1, Inter_2, Inter_3) for moderation analysis.
• Completeness: No missing values.
• Analysis Readiness: The dataset is structured for SEM (Structural Equation Modeling), with latent variables represented by multiple observed indicators, and includes standardized values for advanced regression/path analysis.
DOI: 10.17632/8h9kpmprvc.1
title: Virtual CoachII

description: Dataset Description
• Size: 603 respondents × 76 variables.
• Respondents: Adult Nepalese individuals who have used AI-driven fitness apps for at least one month.
• Demographics: Includes gender, age group, academic qualification, types of fitness apps used, exercise habits, and duration of use.
• Study Variables:
o Independent Variables (IVs): Perceived Privacy (PP), Anthropomorphism (AP), Perceived Empathy (PE), Perceived Joy (PJ), Perceived Usefulness (PU).
o Moderating Variables (MVs): Health Behavior Changes (HBC), Perceived Trustworthiness (PT).
o Dependent Variable (DV): Health and Well-being (HW).
• Indicators: Each latent construct is measured using multiple observed items (Likert scale: 1 = strongly disagree, 5 = strongly agree).
• Data Preparation:
o Raw item-level responses (PP_1 to HW_6).
o Computed mean scores for constructs (e.g., PP, AP, PU, HW).
o Standardized z-scores (e.g., ZPerceived_Privacy, ZHealth_and_Well_being).
o Interaction terms (Inter_1, Inter_2, Inter_3) for moderation analysis.
• Completeness: No missing values.
• Analysis Readiness: The dataset is structured for SEM (Structural Equation Modeling), with latent variables represented by multiple observed indicators, and includes standardized values for advanced regression/path analysis.
DOI: 10.17632/m86nv2w5nx.1
title: Supplementary Figure S1. Serum total IgE and eosinophil counts during dupilumab and tralokinumab therapy in a pediatric patient with STAT3-HIES

description: Supplementary Figure S1. Serum total IgE (IU/mL) and eosinophil counts (/µL) during sequential treatment with dupilumab (weeks 0–28) and tralokinumab (weeks 4–32), separated by a 4-week washout period. Values are shown for each treatment-weeks.
DOI: 10.3535/04q-16s-qzn
title: Calicium viride Pers.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/rt0-4z8-tqw
title: Calicium viride Pers.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.8e9sg3
title: Occurrence Download

description: A dataset containing 760 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "GadmGid is COL.28.9_2",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Squamata, Crocodylia, Testudines)"
 ]
}

 The dataset includes 760 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046566-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/4re-g81-nkv
title: Bryoria pseudofuscescens (Gyeln.) Brodo & D. Hawksw.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.xs9d2m
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Paracleistostoma depressum"
 ]
}

 The dataset includes 17 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046567-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/ndq-zte-638
title: Carbonea assimilis (Hampe ex Körb.) Hafellner & Hertel

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/0cj-mrk-fk7
title: Carbonea assimilis (Hampe ex Körb.) Hafellner & Hertel

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.17632/jntr77842y
title: Code and EKF_output

description: This dataset is derived from a study on real-time monitoring of cotton field moisture using electromagnetic induction (EM38-MK2) and an Extended Kalman Filter (EKF) algorithm. It consists of two main components: 1) spatially interpolated 3D soil moisture distribution data generated using natural neighbor interpolation in MATLAB, covering a volume of 30 m × 30 m horizontally and 30 m depth with a resolution of 0.15 m, where moisture values are clipped to a range of 0–30%; and 2) EKF model validation data containing paired measurements of observed soil moisture and EKF-predicted values across multiple sampling points, covering moisture conditions ranging approximately from 14% to 22%. The data were obtained from apparent electrical conductivity (ECa) measurements and calibrated using traditional soil moisture sensing techniques. The dataset supports applications in precision agriculture, soil moisture dynamics analysis, hydrological modeling, and development of inversion algorithms for electromagnetic induction data. A subset of the data is publicly available, with additional data available upon reasonable request for peer review purposes.
DOI: 10.17632/jntr77842y.1
title: Code and EKF_output

description: This dataset is derived from a study on real-time monitoring of cotton field moisture using electromagnetic induction (EM38-MK2) and an Extended Kalman Filter (EKF) algorithm. It consists of two main components: 1) spatially interpolated 3D soil moisture distribution data generated using natural neighbor interpolation in MATLAB, covering a volume of 30 m × 30 m horizontally and 30 m depth with a resolution of 0.15 m, where moisture values are clipped to a range of 0–30%; and 2) EKF model validation data containing paired measurements of observed soil moisture and EKF-predicted values across multiple sampling points, covering moisture conditions ranging approximately from 14% to 22%. The data were obtained from apparent electrical conductivity (ECa) measurements and calibrated using traditional soil moisture sensing techniques. The dataset supports applications in precision agriculture, soil moisture dynamics analysis, hydrological modeling, and development of inversion algorithms for electromagnetic induction data. A subset of the data is publicly available, with additional data available upon reasonable request for peer review purposes.
DOI: 10.3535/4cx-1s1-c1a
title: Buellia arborea Coppins & Tønsberg

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/dwn-8y8-z4m
title: Buellia arborea Coppins & Tønsberg

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/s3p-prg-shx
title: Catillaria atomarioides (Müll. Arg.) H. Kilias

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/bpd-v78-rgj
title: Catillaria atomarioides (Müll. Arg.) H. Kilias

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/k0k-xns-1ay
title: Calicium viride Pers.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/kax-26m-k7s
title: Calicium viride Pers.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/am8-h7p-j6s
title: Buellia jugorum (Arnold) Arnold

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/je9-jgc-yr3
title: Buellia jugorum (Arnold) Arnold

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/eww-5aw-zyx
title: Buellia jugorum (Arnold) Arnold

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.17632/x9ms3fhc9f.1
title: GPR143 directs virus-induced cell vacuolation via the MKK6–p38 pathway

description: Cytoplasmic vacuolization is observed in vertebrate cells following exposure to viral pathogens. Causing cytoplasmic vacuolization is a key step for many viruses to induce cell death, however, the mechanisms underlying cytoplasmic vacuolization are unclear. Nervous necrosis virus (NNV) induces pronounced cytoplasmic vacuoles in the brain during infection. G protein-coupled receptors (GPCRs) regulate autophagosomes and cause vacuolation. Here, we used grouper and red-spotted grouper NNV (RGNNV) as the model to investigate the role of GPCRs in mediating virus induced cellular vacuolation in the central nervous system. GPR143 enhanced RGNNV-induced cytoplasmic vacuolation through intracellular binding to the RGNNV capsid protein and influenced the binding of autophagosomes and lysosomes. RGNNV enhanced interactions between GPR143 and MKK6, which phosphorylated p38 mitogen-activated protein kinase, subsequently activating the mTOR pathway, augmenting the binding of autophagosomes and lysosomes, and causing cytoplasmic vacuolation. Our study adds a new pathway by which viruses cause vacuolation in vertebrates.
DOI: 10.15468/dl.xwxcm9
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Paracleistostoma longimanum"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046569-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/dbl-kcp-zkw
title: Buellia jugorum (Arnold) Arnold

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/1c3-nmw-qak
title: Catillaria atomarioides (Müll. Arg.) H. Kilias

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/nxw-23d-dbh
title: Buellia arborea Coppins & Tønsberg

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/yj8-s1w-sh4
title: Catillaria atomarioides (Müll. Arg.) H. Kilias

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/atw-2k9-hnr
title: Bryoria pseudofuscescens (Gyeln.) Brodo & D. Hawksw.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.17632/fwchn776f2
title: LINF_270008800

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/fwchn776f2.1
title: LINF_270008800

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.5281/zenodo.17088256
title: ESM2 15B parameter embeddings for GFP deep mutational scan dataset

description: This release accompanies the pub, "Efficient GFP variant design with a simple neural network ensemble"



This dataset contains the file "esm2_15b_embeddings_and_meta.csv" which contains the embeddings for the sequences from the amino_acid_genotypes_to_brightness.tsv file available at https://figshare.com/articles/dataset/Local_fitness_landscape_of_the_green_fluorescent_protein/3102154.
DOI: 10.5281/zenodo.17088257
title: ESM2 15B parameter embeddings for GFP deep mutational scan dataset

description: This release accompanies the pub, "Efficient GFP variant design with a simple neural network ensemble"



This dataset contains the file "esm2_15b_embeddings_and_meta.csv" which contains the embeddings for the sequences from the amino_acid_genotypes_to_brightness.tsv file available at https://figshare.com/articles/dataset/Local_fitness_landscape_of_the_green_fluorescent_protein/3102154.
DOI: 10.3535/qsz-8q0-nmn
title: Calicium viride Pers.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.ar8j29
title: Occurrence Download

description: A dataset containing 263 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "GadmGid is BRA.6.60_2",
 "IucnRedListCategory is one of (EX, EW, CR, EN, VU, NT, LC, DD, NE)",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 263 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046570-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/584-5f9-y9f
title: Bryoria pseudofuscescens (Gyeln.) Brodo & D. Hawksw.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/l0x-x2n-jbj
title: Buellia arnoldii Servít

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/3s6-70s-a20
title: Buellia arborea Coppins & Tønsberg

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.17632/trbc9kf229
title: International collaboration in research: Insights from pharmaceutical multinationals (data and graphs)

description: This article aims to identify the scope and intensity of international collaboration in research conducted by multinational firms in the pharmaceutical sector, before and after the COVID-19 pandemic, and to investigate the key factors that determine the impact of scientific publications. We focus on two large multinational enterprises (MNEs) that are inventors of vaccines against the COVID-19 virus, namely AstraZeneca and Pfizer. Using bibliometric methods, a sample of 392 peer-reviewed scientific articles published jointly by the authors from AstraZeneca and Pfizer has been selected from the Scopus database and used as a proxy for the joint collaborative R&D efforts. We show that research collaboration between competing pharmaceutical multinationals has intensified during the COVID-19 pandemic, and their R&D relations have moved towards so-called “coopetition.” Based on a regression model that explains the impact of joint research measured by the number of citations, we found citation increases associated with the article’s type (review article), the affiliation country of the first author (primarily the United States), the affiliation type of the first author (academic institution), and country-level affiliation diversity (post-pandemic only). Universities were shown to be able, in certain circumstances, to help legitimize the results for the broader academic audience.
DOI: 10.17632/trbc9kf229.1
title: International collaboration in research: Insights from pharmaceutical multinationals (data and graphs)

description: This article aims to identify the scope and intensity of international collaboration in research conducted by multinational firms in the pharmaceutical sector, before and after the COVID-19 pandemic, and to investigate the key factors that determine the impact of scientific publications. We focus on two large multinational enterprises (MNEs) that are inventors of vaccines against the COVID-19 virus, namely AstraZeneca and Pfizer. Using bibliometric methods, a sample of 392 peer-reviewed scientific articles published jointly by the authors from AstraZeneca and Pfizer has been selected from the Scopus database and used as a proxy for the joint collaborative R&D efforts. We show that research collaboration between competing pharmaceutical multinationals has intensified during the COVID-19 pandemic, and their R&D relations have moved towards so-called “coopetition.” Based on a regression model that explains the impact of joint research measured by the number of citations, we found citation increases associated with the article’s type (review article), the affiliation country of the first author (primarily the United States), the affiliation type of the first author (academic institution), and country-level affiliation diversity (post-pandemic only). Universities were shown to be able, in certain circumstances, to help legitimize the results for the broader academic audience.
DOI: 10.3535/3mj-qkf-f9h
title: Bryoria pseudofuscescens (Gyeln.) Brodo & D. Hawksw.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/15m-a1m-a29
title: Bryoria nadvornikiana (Gyeln.) Brodo & D. Hawksw.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.17632/47ypdj999m
title: LINF_270008700

description: AAA+ ATPase domain-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.3535/bxt-4g5-ran
title: Catillaria picila (A. Massal.) Coppins

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/l1c-rc6-wx4
title: Bryoria pseudofuscescens (Gyeln.) Brodo & D. Hawksw.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.17632/47ypdj999m.1
title: LINF_270008700

description: AAA+ ATPase domain-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.3535/bzl-gn4-exn
title: Bryoria nadvornikiana (Gyeln.) Brodo & D. Hawksw.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/ddm-kck-8zh
title: Calicium lenticulare Ach.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/s4j-kz9-8av
title: Catinaria atropurpurea (Schaer.) Vězda & Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.17632/fjwmgb6xp6
title: LINF_270008000

description: mt-SAF32 | Acyl carrier protein; Leishmania infantum (strain JPCM5)
DOI: 10.3535/aej-j3q-6ap
title: Calicium viride Pers.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.15468/dl.698udb
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Paracleistostoma wardi"
 ]
}

 The dataset includes 71 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046571-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/fjwmgb6xp6.2
title: LINF_270008000

description: mt-SAF32 | Acyl carrier protein; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.yxvfwd
title: Occurrence Download

description: A dataset containing 120 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is iNaturalist Research-grade Observations",
 "Geometry POLYGON((-103.04272 47.32944,-103.51058 23.8579,-84.32827 27.1313,-57.34828 47.32944,-57.34828 47.85176,-73.73353 47.38512,-97.99631 51.3821,-103.04272 47.85176,-103.04272 47.32944))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is Carya laciniosa",
 "Year 2023-2025"
 ]
}

 The dataset includes 120 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0046572-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/939-bel-9hm
title: Calicium parvum Tibell

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/kh7-exv-k3p
title: Bryoria nadvornikiana (Gyeln.) Brodo & D. Hawksw.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/scy-rsd-qt7
title: Calicium viride Pers.

description: Digital Specimen for the physical specimen hosted at University of Graz.
DOI: 10.3535/bzl-x77-q2s
title: Catinaria atropurpurea (Schaer.) Vězda & Poelt

description: Digital Specimen for the physical specimen hosted at University of Graz.