cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.bwrsz7
title: Occurrence Download

description: A dataset containing 53039 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Geometry POLYGON ((38.90617 9.088992, 38.89612 9.088992, 38.89557 9.080865, 38.88552 9.080865, 38.87546 9.080865, 38.87492 9.072739, 38.86486 9.072739, 38.86378 9.056485, 38.85372 9.056485, 38.85318 9.048359, 38.83307 9.048359, 38.83361 9.056485, 38.82356 9.056485, 38.82301 9.048359, 38.8029 9.048359, 38.80345 9.056485, 38.79339 9.056485, 38.79393 9.064612, 38.78388 9.064612, 38.78442 9.072739, 38.77436 9.072739, 38.77491 9.080865, 38.75479 9.080865, 38.75425 9.072739, 38.69392 9.072739, 38.69446 9.080865, 38.65424 9.080865, 38.6537 9.072739, 38.64364 9.072739, 38.6431 9.064612, 38.66321 9.064612, 38.66267 9.056485, 38.67273 9.056485, 38.67111 9.032106, 38.68116 9.032106, 38.68009 9.015853, 38.67003 9.015853, 38.66896 8.999601, 38.65891 8.999601, 38.65517 8.942719, 38.64511 8.942719, 38.64405 8.926468, 38.634 8.926468, 38.63347 8.918343, 38.62341 8.918343, 38.61336 8.918343, 38.61283 8.910217, 38.60278 8.910217, 38.59272 8.910217, 38.59219 8.902092, 38.64246 8.902092, 38.64193 8.893967, 38.65198 8.893967, 38.65304 8.910217, 38.66309 8.910217, 38.66362 8.918343, 38.67368 8.918343, 38.67421 8.926468, 38.68426 8.926468, 38.68479 8.934594, 38.69485 8.934594, 38.69538 8.942719, 38.71549 8.942719, 38.71495 8.934594, 38.72501 8.934594, 38.72341 8.910217, 38.74352 8.910217, 38.74298 8.902092, 38.75304 8.902092, 38.75198 8.885841, 38.76203 8.885841, 38.76097 8.869591, 38.77102 8.869591, 38.77049 8.861466, 38.78054 8.861466, 38.78001 8.853341, 38.80012 8.853341, 38.79959 8.845217, 38.80964 8.845217, 38.81123 8.869591, 38.80118 8.869591, 38.80277 8.893967, 38.81282 8.893967, 38.81335 8.902092, 38.79325 8.902092, 38.79378 8.910217, 38.78373 8.910217, 38.78586 8.942719, 38.79591 8.942719, 38.79645 8.950845, 38.7864 8.950845, 38.78747 8.967097, 38.79752 8.967097, 38.79806 8.975222, 38.81816 8.975222, 38.81763 8.967097, 38.82768 8.967097, 38.82822 8.975222, 38.83827 8.975222, 38.83881 8.983348, 38.85892 8.983348, 38.86897 8.983348, 38.87059 9.007727, 38.88064 9.007727, 38.88118 9.015853, 38.89124 9.015853, 38.89232 9.032106, 38.88226 9.032106, 38.88335 9.048359, 38.8934 9.048359, 38.89394 9.056485, 38.904 9.056485, 38.90509 9.072739, 38.91514 9.072739, 38.91569 9.080865, 38.92574 9.080865, 38.9358 9.080865, 38.93689 9.097119, 38.90672 9.097119, 38.90617 9.088992))",
 "Year is greater than or equal to 2010",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 53039 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054175-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cjv4x3
title: Occurrence Download

description: A dataset containing 1856 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Bactrocera minax"
 ]
}

 The dataset includes 1856 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054183-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30889409
title: Source data for "Co-propagating topological interface states with hybridized pseudo-spins"

description: Source data and MATLAB codes for generating figures in the manuscript
DOI: 10.6084/m9.figshare.30889409.v1
title: Source data for "Co-propagating topological interface states with hybridized pseudo-spins"

description: Source data and MATLAB codes for generating figures in the manuscript
DOI: 10.13140/rg.2.2.11705.02406
title: microrregiões hidrográficas do Acre
DOI: 10.25374/mcri.29525858
title: How mild and one-sided hearing loss affects children’s language development and wellbeing

description: Improved technology is identifying children with mild and one-sided hearing loss earlier than ever. What does this mean for children’s spoken language and wellbeing? Some children with mild or one-sided hearing loss had suboptimal mental wellbeing, but most had good physical wellbeing
. 
Less than half of children with mild or one‑sided hearing loss had engaged with early intervention services.
DOI: 10.25374/mcri.29525858.v1
title: How mild and one-sided hearing loss affects children’s language development and wellbeing

description: Improved technology is identifying children with mild and one-sided hearing loss earlier than ever. What does this mean for children’s spoken language and wellbeing? Some children with mild or one-sided hearing loss had suboptimal mental wellbeing, but most had good physical wellbeing
. 
Less than half of children with mild or one‑sided hearing loss had engaged with early intervention services.
DOI: 10.6084/m9.figshare.28405775
title: <b>Pervasive transcription in the human genome </b><b>exceeds background noise</b>

description: Repository contains:Experimental GRO-capLift_T2T_Masks_to_GRCh38chm13v2-hg38.over.chain.gz - chain file used for mask liftover (T2T to GRCh38)Lift_to_T2Tchr_to_nc.tsv - UCSC to NCBI format conversion tablehg38-chm13v2.over.chain.gz - chain file used for liftover (GRCh38 to T2T)unmapped.txt - regions that failed liftoverenbw_plus_HPRT1.bedgraph - Experimental GRO-cap data of HPRT1 region onlyenbw_plus_perbp.bedgraph - Experimental GRO-cap data, one nucleotide per rowFastasHoldout_and_HPRT1chr8:89,892,879-89,992,878.fasta - 100 kb region within Puffin-D holdout chromosomes used in supplementary figures plotting Puffin-D outputHPRT1_100kb.fasta / HPRT1R_100kb.fasta / HPRT1rNoCpG_padded.fasta - 100 kb HPRT1 variations used in Camellato et al., 2024.T2T_fastas_by_chr - By-chromosome fasta files containing 100 kb chunks for the T2T forward genome.Puffin-D Numpy ArraysHoldout_and_HPRT1 - Puffin-D Numpy outputs for 100 kb Holdout region and HPRT1 variants.chr8_89,892,879-89,992,878.npyHPRT1.npy / HPRT1R.npy / HPRT1RnoCpG_AllRightPad.npy - 100 kb HPRT1 variations used in Camellato et al., 2024.Transposon_Analysesdatasets_positions.tsv - list of datasets and corresponding GRO-cap TSS position .bed files (for use with summarise_repeat_nonrepeat.rscript)each .bed file listed in datasets_positions.tsv (including 'GROcap_chm13_nc_perbp.bed' - Experimental GRO-cap data lifted to the T2T genome)Inter-cluster distance distribution across read thresholds movie.gif - GIF showing the changing distribution of inter-cluster distances across varying read thresholds.
DOI: 10.6084/m9.figshare.28405775.v4
title: <b>Pervasive transcription in the human genome </b><b>exceeds background noise</b>

description: Repository contains:Experimental GRO-capLift_T2T_Masks_to_GRCh38chm13v2-hg38.over.chain.gz - chain file used for mask liftover (T2T to GRCh38)Lift_to_T2Tchr_to_nc.tsv - UCSC to NCBI format conversion tablehg38-chm13v2.over.chain.gz - chain file used for liftover (GRCh38 to T2T)unmapped.txt - regions that failed liftoverenbw_plus_HPRT1.bedgraph - Experimental GRO-cap data of HPRT1 region onlyenbw_plus_perbp.bedgraph - Experimental GRO-cap data, one nucleotide per rowFastasHoldout_and_HPRT1chr8:89,892,879-89,992,878.fasta - 100 kb region within Puffin-D holdout chromosomes used in supplementary figures plotting Puffin-D outputHPRT1_100kb.fasta / HPRT1R_100kb.fasta / HPRT1rNoCpG_padded.fasta - 100 kb HPRT1 variations used in Camellato et al., 2024.T2T_fastas_by_chr - By-chromosome fasta files containing 100 kb chunks for the T2T forward genome.Puffin-D Numpy ArraysHoldout_and_HPRT1 - Puffin-D Numpy outputs for 100 kb Holdout region and HPRT1 variants.chr8_89,892,879-89,992,878.npyHPRT1.npy / HPRT1R.npy / HPRT1RnoCpG_AllRightPad.npy - 100 kb HPRT1 variations used in Camellato et al., 2024.Transposon_Analysesdatasets_positions.tsv - list of datasets and corresponding GRO-cap TSS position .bed files (for use with summarise_repeat_nonrepeat.rscript)each .bed file listed in datasets_positions.tsv (including 'GROcap_chm13_nc_perbp.bed' - Experimental GRO-cap data lifted to the T2T genome)Inter-cluster distance distribution across read thresholds movie.gif - GIF showing the changing distribution of inter-cluster distances across varying read thresholds.
DOI: 10.6084/m9.figshare.28405775.v3
title: <b>Most pervasive transcription in </b><b>the human</b><b> genome is </b><b>inconsistent with background noise</b>

description: Repository contains:Experimental_GrocapLift_T2T_Masks_to_GRCh38chm13v2-hg38.over.chain.gz - chain file used for mask liftover (T2T to GRCh38)lift_to_T2Tchr_to_nc.tsv - UCSC to NCBI format conversion tableGROcap_chm13_nc_sorted.bed - Experimental GROcap data lifted to T2T genomehg38-chm13v2.over.chain.gz - chain file used for liftover (GRCh38 to T2T)unmapped.txt - regions that failed liftoverenbw_plus_HPRT1.bedgraph - Experimental GROcap data of HPRT1 region onlyenbw_plus_perbp.bedgraph - Experimental GROcap data, one nucleotide per rowFastasHoldoutchr8:89,892,879-89,992,878.fasta - Selected 100kb region within Puffin-D holdout chromosomes used in supplementary figures plotting Puffin-D outputHPRT1HPRT1_100kb.fasta / HPRT1R_100kb.fasta / HPRT1rNoCpG_padded.fasta - HPRT1 variations used in Camellato et al., 2024.T2T_fastas_by_chr - By-chromosome fasta files containing 100kb chunks for the T2T forward and reverse genomes.Puffin-D Numpy ArraysHoldout / HPRT1 - Puffin-D Numpy outputs for Holdout region and HPRT1 variants.Inter-cluster distance distribution across read thresholds movie.gif - Gif showing the changing distribution of inter-cluster distances across varying read thresholds.datasets_positions.tsv - list of datasets and corresponding GROcap TSS positions bed files (for use with summarise_repeat_nonrepeat.rscript)<br>
DOI: 10.15468/dl.b9qgxg
title: Occurrence Download

description: A dataset containing 9525 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Aedes aegypti",
 "Year 1990-2025"
 ]
}

 The dataset includes 9525 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054184-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13140/rg.2.2.25126.79680
title: mapa de geomorfologia do estado do Acre
DOI: 10.6084/m9.figshare.30393025.v1
title: Divergent responses of soil heterotrophic respiration to N deposition

description: Numerous studies have demonstrated that soil heterotrophic respiration (<i>R</i><sub>H</sub>) is significantly influenced by the atmospheric nitrogen (N) deposition. However, the response ratios (Δ<i>R</i><sub>H</sub>) exhibit substantial spatial heterogeneity worldwide. Here, based on a hierarchical meta-analysis of 912 paired observations from global N addition experiments, we show that this heterogeneity in Δ<i>R</i><sub>H</sub> can be explained by the divergences in the ecological characteristics of the sample sites. The mean annual precipitation (MAP) and mean annual temperature (MAT) at the sample sites exhibited linear negative effects on Δ<i>R</i><sub>H</sub>, especially in regions with high MAP (&gt; 700 mm) or MAT (&gt; 17 °C). Δ<i>R</i><sub>H</sub> significantly increased in alkaline soils (pH &gt; 7.5) but decreased in acidic soils (pH &lt; 5.5). Furthermore, Δ<i>R</i><sub>H</sub> significantly increased in soils with high total organic carbon (TOC &gt; 15 g/kg) or low available N contents (NH4+ &lt; 19 mg/kg or NO3− &lt; 15 mg/kg), but decreased in soils with high total N (TN &gt; 11 g/kg). Additionally, N addition altered soil properties, such as soil microbial biomass, pH, TOC, TN, C:N ratio, NH4+, and NO3−. The alternations in soil microbial biomass (ΔBiomass) and pH linearly affected Δ<i>R</i><sub>H</sub> at the global scale, whereas others linearly impacted Δ<i>R</i><sub>H</sub> only under certain threshold levels. Structural equation modeling demonstrated that the ΔBiomass, which directly and ultimately drives the variation in Δ<i>R</i><sub>H</sub>, was simultaneously modulated by climatic conditions, initial soil properties, and their alternations after N addition. Moreover, these factors significantly interacted with each other, and their relative importance to Δ<i>R</i><sub>H</sub> varied across sample sites. Using machine learning, we predicted the global Δ<i>R</i><sub>H</sub> following a 10% increase in atmospheric N deposition and observed significant heterogeneity (–32.3% to +142%). Our findings suggest that when accurately evaluating soil <i>R</i><sub>H</sub> to N deposition, the levels of sample site characteristics and their interactions should be comprehensively considered.
DOI: 10.5517/cc5jply
title: CCDC 165000: Experimental Crystal Structure Determination

description: Related Article: F.Garcia, D.J.Linton, M.McPartlin, A.Rothenberger, A.E.H.Wheatley, D.S.Wright|2002|J.Chem.Soc.,Dalton Trans.||481|doi:10.1039/b110984g
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.17796208
title: mingpu-dft
DOI: 10.13140/rg.2.2.18415.91043
title: ACONTACS
DOI: 10.13140/rg.2.2.31837.68325
title: AC REGIONAIS
DOI: 10.5281/zenodo.17946319
title: ODD
DOI: 10.5281/zenodo.17946320
title: ODD
DOI: 10.5281/zenodo.17946254
title: dataset: Joint effects of dormancy and dispersal

description: This is the dataset of the research article "Joint influence of seed dormancy and dispersal syndrome on dispersal distance and range size across two climate regions".

Here are two files. One is a record of all the sources of literature used for data collection, and the other is the specific data used in the data analysis process.
DOI: 10.5281/zenodo.17946255
title: dataset: Joint effects of dormancy and dispersal

description: This is the dataset of the research article "Joint influence of seed dormancy and dispersal syndrome on dispersal distance and range size across two climate regions".

Here are two files. One is a record of all the sources of literature used for data collection, and the other is the specific data used in the data analysis process.
DOI: 10.6084/m9.figshare.30889454
title: <b>Chromosome-level genome assembly of wild perennial soybean </b><b><i>Glycine canescens</i></b>

description: Genetic bottlenecks during domestication have led to low genetic diversity, which restricts soybean breeding. In contrast, perennial wild soybeans exhibit high genetic diversity, especially with excellent tolerance to biotic and abiotic stresses. <i>Glycine canescens</i> is one of the few perennial wild soybeans that have been successfully hybridized with cultivated soybean, holding significant application value in soybean breeding. In this study, we assembled a chromosome-level genome of <i>Glycine canescens</i>, with a total genome length of 933 Mb and a scaffold N50 length of 47.24 Mb. The genome completeness is estimated to be 98.4% based on BUSCO evaluation. A total of 54,961 protein-coding genes were predicted in the genome, of which 23,790 genes were classified as core genes. Our work provides a new genomic resource for the soybean breeding.
DOI: 10.6084/m9.figshare.30889454.v1
title: <b>Chromosome-level genome assembly of wild perennial soybean </b><b><i>Glycine canescens</i></b>

description: Genetic bottlenecks during domestication have led to low genetic diversity, which restricts soybean breeding. In contrast, perennial wild soybeans exhibit high genetic diversity, especially with excellent tolerance to biotic and abiotic stresses. <i>Glycine canescens</i> is one of the few perennial wild soybeans that have been successfully hybridized with cultivated soybean, holding significant application value in soybean breeding. In this study, we assembled a chromosome-level genome of <i>Glycine canescens</i>, with a total genome length of 933 Mb and a scaffold N50 length of 47.24 Mb. The genome completeness is estimated to be 98.4% based on BUSCO evaluation. A total of 54,961 protein-coding genes were predicted in the genome, of which 23,790 genes were classified as core genes. Our work provides a new genomic resource for the soybean breeding.
DOI: 10.15468/dl.my8cfz
title: Occurrence Download

description: A dataset containing 82 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Consolea corallicola"
 ]
}

 The dataset includes 82 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054185-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.26183/tkmw-yv91
title: Evolving Anzac: tradition, young people, and contemporary values

description: This research will seek to understand the attitudes of young people aged between 18 and 25 in relation to the traditional constructs of the Department of Defence, incorporating the Australian Defence Force and the Australian Public Service. The dataset contains transcriptions of semi-structured interviews with Gen Z participants from the Australian Defence Force, the Australian Public Service, and non-Defence participants.
This dataset is not available for open publication due to ethics restrictions. 
To discuss this research, please contact Raquel Clarke <16270233@student.westernsydney.edu.au> ORCID 0000-0002-2141-2528
DOI: 10.17605/osf.io/jr6qs
title: China Daily Solar Radiation Dataset

description: China Daily Solar Radiation Dataset (CDSRD), a dataset of daily global horizontal irradiance (GHI) and diffuse horizontal irradiance (DHI) at 1042 stations in China, and covers the period 1970 to 2017, established by the Zero Energy & Zero Carbon Buildings team of Xi’an University of Architecture and Technology.
DOI: 10.34740/kaggle/dsv/14170622
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.17605/osf.io/agy6w
title: data sample 1
DOI: 10.5281/zenodo.17946264
title: PnRFs of Hi-CLIMB array across the Himalayan orogen

description: PnRF.rar composes of the PnRFs of 74 stations from the south segment of Hi-CLIMB broadband seismic array

All files are SAC binary format.
DOI: 10.5281/zenodo.17946265
title: PnRFs of Hi-CLIMB array across the Himalayan orogen

description: PnRF.rar composes of the PnRFs of 74 stations from the south segment of Hi-CLIMB broadband seismic array

All files are SAC binary format.
DOI: 10.17605/osf.io/8ypm5
title: TRACE: Trauma and Remembrance in Animal models and Clinical studies Evaluated

description: Current evidence-based treatments for post-traumatic stress disorder (PTSD) are efficacious in only part of PTSD patients. Therefore, novel neurobiologically informed approaches are urgently needed. Clinical and translational neuroscience point to altered learning and memory processes as key in (models of) PTSD psychopathology. We extended this notion by clarifying at a meta-level (i) the role of information valence, i.e. neutral versus emotional/fearful, and (ii) comparability, as far as applicable, between clinical and preclinical phenotypes. We hypothesized that cross-species, neutral versus emotional/fearful information processing is, respectively, impaired and enhanced in PTSD. This preregistered meta-analysis involved a literature search on PTSD+Learning/Memory+Behavior, performed in PubMed. First, the effect of information valence was estimated with a random-effects meta-regression. The sources of variation were explored with a random forest-based analysis. The analyses included 92 clinical (N = 6732 humans) and 182 preclinical (N = 6834 animals) studies. A general impairment of learning, memory and extinction processes was observed in PTSD patients, regardless of information valence. Impaired neutral learning/memory and fear extinction were also present in animal models of PTSD. Yet, PTSD models enhanced fear/trauma memory in preclinical studies and PTSD impaired emotional memory in patients. Clinical data on fear/trauma memory was limited. Mnemonic phase and valence explained most variation in rodents but not humans. Impaired neutral learning/memory and fear extinction show stable cross-species PTSD phenotypes. These could be targeted for novel PTSD treatments, using information gained from neurobiological animal studies. We argue that apparent cross-species discrepancies in emotional/fearful memory deserve further in-depth study; until then, animal models targeting this phenotype should be applied with utmost care.
DOI: 10.15468/dl.a2myxs
title: Occurrence Download

description: A dataset containing 159 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Aeluroscalabotes felinus"
 ]
}

 The dataset includes 159 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054189-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kv2b3q
title: Occurrence Download

description: A dataset containing 108713 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is South America",
 "Country is French Guiana",
 "OccurrenceStatus is Present",
 "Year 2024-2025"
 ]
}

 The dataset includes 108713 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054179-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.