cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5136475
title: Supplementary Data to *Robust adaptive distance functions for approximate Bayesian inference on outlier-corrupted data*

description: Supplementary code and data to <strong>Robust adaptive distance functions for approximate Bayesian inference on outlier-corrupted data</strong> by <strong>Y. Schaelte et al., 2021</strong>. The archive contains a <strong>README.rst </strong>for information on what is where and how to execute the study and generate the figures. The underlying code without the data can be found at the repository https://github.com/yannikschaelte/study_abc_rad, of which this archive is a snapshot.
DOI: 10.3886/e145981v1
title: Need for structure: Categorizing ambiguous items as art or not art

description: In four studies, I attempted to use an art categorization task to temporarily manipulate participants' need for structure, and possibly their attitudes toward bisexual people. The task involved categorizing ambiguous or unambiguous items as "art" or "not art."<br><br>Data were collected via Amazon Mechanical Turk in July and August 2013. Study 1 took place on 2013-07-08, Study 2 on 2013-07-24, Study 3 from 2013-08-01 to 2013-08-02, and Study 4 on 2013-08-12.<br><br>I recognize that the documentation of this project could be more detailed. I have many projects that could benefit from additional public documentation. If you are using the data, please reach out to me via email and I can prioritize sharing more information about this one. My most up-to-date email address should be available at saraemilyburke.com/contact.html.<br><br>
DOI: 10.5281/zenodo.5136281
title: [old/mistake] Data used in the GRL paper titled "Climatology of Tropical Cyclone Seed Frequency and Survival Rate in Tropical Cyclones"

description: Data used in the GRL paper titled "Climatology of Tropical Cyclone Seed Frequency and Survival Rate in Tropical Cyclones" by Ikehata and Satoh Please download and decompress the zip file. We describe details of this dataset in "readme.txt".
DOI: 10.5281/zenodo.5136280
title: [old/mistake] Data used in the GRL paper titled "Climatology of Tropical Cyclone Seed Frequency and Survival Rate in Tropical Cyclones"

description: Data used in the GRL paper titled "Climatology of Tropical Cyclone Seed Frequency and Survival Rate in Tropical Cyclones" by Ikehata and Satoh Please download and decompress the zip file. We describe details of this dataset in "readme.txt".
DOI: 10.5281/zenodo.5055697
title: Data and scripts for the preprint gmd-2021-95 (a revised verison)

description: The datasets and Matlab scripts we upload at Zenodo on 2021-07-02 are for the reproduction of our manuscript (a revised version of the preprint gmd-2021-95) submitted to Geoscientific Model Development for possible publication. This is a model evaluation paper. We downloaded the original data kindly provided by the The UK Meteorological Office (EN4.2.1) and JAMSTEC (OFES1 and OFES2). These original data are monthly values and we calculated the annual mean fields (the archived data). The uploaded data included the zonal, meridional and vertical velocities (not for the EN4); and also the potential temperature and salinity data. We also included some grid files for the calculation of OHC or other variables in our manuscript. These data are suggested to be used only to reproduce the results in our submitted revision of the preprint gmd-2021-95. The readers can also access the original data as follows. Limited by the local network connection, we have to separate all the datasets into a couple of folders to successfully upload. Note: the original monthly EN4.2.1 data is downloaded from: https://www.metoffice.gov.uk/hadobs/en4/download-en4-2-1.html the original monthly OFES1 data is downloaded from: http://apdrc.soest.hawaii.edu/dods/public_ofes/OfES/ncep_0.1_global_mmean; the original monthly OFES2 data is downloaded from (temporarily suspended): http://www.jamstec.go.jp/esc/fes/dods/OFES2/Monthly/
DOI: 10.6084/m9.figshare.15048822
title: Guerillot_Dataset1_GPL10350_Mellp_v2.txt

description: Life cycle transcriptomics datasets for the poplar rust fungus Melampsora larici-populina
DOI: 10.6084/m9.figshare.15048822.v1
title: Guerillot_Dataset1_GPL10350_Mellp_v2.txt

description: Life cycle transcriptomics datasets for the poplar rust fungus Melampsora larici-populina
DOI: 10.6084/m9.figshare.15050235
title: O18 processed data

description: SIMS-derived Oxygen Isotope Data Processing (Cellana sandwicensis)<br>
DOI: 10.6084/m9.figshare.15050235.v1
title: O18 processed data

description: SIMS-derived Oxygen Isotope Data Processing (Cellana sandwicensis)<br>
DOI: 10.6084/m9.figshare.15050238.v1
title: Growth Model

description: Data set used to produce a VGBF growth model of Hawaiian limpet (Cellana sandwicensis)<br>
DOI: 10.6084/m9.figshare.15050238
title: Growth Model

description: Data set used to produce a VGBF growth model of Hawaiian limpet (Cellana sandwicensis)<br>
DOI: 10.6084/m9.figshare.15050259
title: Diversidad y estructura de Sapotaceae en bosques amazónicos de Madre de Dios, Perú

description: Diversidad y estructura de Sapotaceae en bosques amazónicos de Madre de Dios, Perú<br>
DOI: 10.6084/m9.figshare.14762991
title: Screening of chemical libraries for new antifungal drugs against Aspergillus fumigatus reveals sphingolipids are involved in the potential mechanism of action of miltefosine

description: <i>Aspergillus fumigatus</i> is an important fungal pathogen and the main etiological agent of aspergillosis, a disease characterized by a noninvasive process that can evolve to a more severe clinical manifestation called invasive pulmonary aspergillosis (IPA) in immunocompromised patients. The antifungal arsenal to threat aspergillosis is very restricted. Azoles are the main therapeutic approach to control IPA, but the emergence of azole-resistant <i>A. fumigatus </i>isolates has significantly increased over the last decades. Therefore, new strategies are necessary to combat aspergillosis and drug repurposing has emerged as an efficient and alternative approach for identifying new antifungal drugs. Here, we used a screening approach to analyze <i>A. fumigatus</i> in vitro susceptibility to 1,127 compounds. <i>A. fumigatus</i> was susceptible to 10 compounds, including miltefosine, a drug that displayed fungicidal activity against <i>A. fumigatus</i>. By screening an <i>A. fumigatus</i> transcription factor null library, we identified a single mutant, which has the <i>smiA</i> (<i>s</i>ensitivity to <i>m</i>iltefosine) gene deleted, conferring a phenotype of susceptibility to miltefosine. The transcriptional profiling (RNA-seq) of the wild-type and the Δ<i>smiA</i> strains and the Chromatin Immunoprecipitation coupled to next generation sequencing (ChIP-Seq) of a SmiA-tagged strain exposed to miltefosine revealed genes of the sphingolipids pathway that are directly or indirectly regulated by SmiA. Sphingolipids analysis demonstrated that the mutant has overall decreased levels of sphingolipids when growing in the presence of miltefosine. The identification of SmiA represents the first genetic element described and characterized which plays a direct role in miltefosine response in fungi.<b><br> </b>
DOI: 10.6084/m9.figshare.14762991.v3
title: Screening of chemical libraries for new antifungal drugs against Aspergillus fumigatus reveals sphingolipids are involved in the potential mechanism of action of miltefosine

description: <i>Aspergillus fumigatus</i> is an important fungal pathogen and the main etiological agent of aspergillosis, a disease characterized by a noninvasive process that can evolve to a more severe clinical manifestation called invasive pulmonary aspergillosis (IPA) in immunocompromised patients. The antifungal arsenal to threat aspergillosis is very restricted. Azoles are the main therapeutic approach to control IPA, but the emergence of azole-resistant <i>A. fumigatus </i>isolates has significantly increased over the last decades. Therefore, new strategies are necessary to combat aspergillosis and drug repurposing has emerged as an efficient and alternative approach for identifying new antifungal drugs. Here, we used a screening approach to analyze <i>A. fumigatus</i> in vitro susceptibility to 1,127 compounds. <i>A. fumigatus</i> was susceptible to 10 compounds, including miltefosine, a drug that displayed fungicidal activity against <i>A. fumigatus</i>. By screening an <i>A. fumigatus</i> transcription factor null library, we identified a single mutant, which has the <i>smiA</i> (<i>s</i>ensitivity to <i>m</i>iltefosine) gene deleted, conferring a phenotype of susceptibility to miltefosine. The transcriptional profiling (RNA-seq) of the wild-type and the Δ<i>smiA</i> strains and the Chromatin Immunoprecipitation coupled to next generation sequencing (ChIP-Seq) of a SmiA-tagged strain exposed to miltefosine revealed genes of the sphingolipids pathway that are directly or indirectly regulated by SmiA. Sphingolipids analysis demonstrated that the mutant has overall decreased levels of sphingolipids when growing in the presence of miltefosine. The identification of SmiA represents the first genetic element described and characterized which plays a direct role in miltefosine response in fungi.<b><br> </b>
DOI: 10.5281/zenodo.5136654
title: pogo model for thickness mapping

description: These are pogo models for reconstruction of thickness variation.
DOI: 10.5281/zenodo.5136653
title: pogo model for thickness mapping

description: These are pogo models for reconstruction of thickness variation.
DOI: 10.6084/m9.figshare.15050256
title: Growth Increments

description: Raw increments used to interpret growth rates and develop a growth model for Cellana sandwicensis<br>
DOI: 10.6084/m9.figshare.15050256.v2
title: Growth Increments

description: Raw increments used to interpret growth rates and develop a growth model for Cellana sandwicensis<br>
DOI: 10.6084/m9.figshare.15050256.v1
title: Growth Increments

description: Raw increments used to interpret growth rates and develop a growth model for Cellana sandwicensis<br>
DOI: 10.6084/m9.figshare.15050274
title: Temperature Logger

description: Temperature data-sets from Waikiki Aquarium and Intertidal Logger (Ka'alawai)<br>
DOI: 10.6084/m9.figshare.15050274.v2
title: Temperature Logger

description: Temperature data-sets from Waikiki Aquarium and Intertidal Logger (Ka'alawai)<br>
DOI: 10.6084/m9.figshare.15050274.v1
title: Temperature Logger

description: Temperature data-sets from Waikiki Aquarium and Intertidal Logger (Ka'alawai)<br>
DOI: 10.5281/zenodo.5136727
title: SAR Stack of Pichincha volcano in Ecuador, from Sentinel-1

description: A stack of Coregistered SLCs on Pichincha volcano, Ecuador Sensor: Sentinel-1 Descending track 142 Time: 2016.04.19 - 2017.12.28, 20 acquisitions Processor: ISCE/topsStack This is an input dataset for the time series analysis with MiNoPy.
description: {"references": ["S. Mirzaee, F. Amelung, and H. Fattahi, Non-linear phase inversion package for time series analysis, in AGU Fall Meeting Abstracts, Dec. 2019, vol. 2019, pp. G13C-0572.", "S. Mirzaee and F. Amelung, Volcanic Activity Change Detection Using SqueeSAR-InSAR and Backscatter Analysis, in AGU Fall Meeting Abstracts, Dec. 2018, vol. 2018, pp. G41B-0707."]}
DOI: 10.6084/m9.figshare.15050295
title: Fenología de Sapotaceae de interés en la selva baja de la cuenca del río Madre de Dios, Perú 2007

description: <b>Fenología de Sapotaceae de interés en la selva baja de la cuenca del río Madre de Dios, Perú 2007</b>
DOI: 10.6084/m9.figshare.15050295.v1
title: Fenología de Sapotaceae de interés en la selva baja de la cuenca del río Madre de Dios, Perú 2007

description: <b>Fenología de Sapotaceae de interés en la selva baja de la cuenca del río Madre de Dios, Perú 2007</b>
DOI: 10.6084/m9.figshare.6217754
title: Database for paper "Spatial and temporal patterns of sound production in East Greenland narwhals"

description: These data were used in the statistical analyses presented in the PLoS ONE paper "Spatial and temporal patterns of sound production in East Greenland narwhals". Please consult the paper for the methodology. The database includes 6 columns with the following information:<b><br></b><b>Datetime:</b> date and time.<b><br></b><b>Ind:</b> individual, by name (see paper).<br><b>Depth:</b> diving depth, in meters. Negative depths are considered surface.<b>Area:</b> in which of the four areas defined in the paper (F = Fønfjord, O or Ø = Øfjord, G = Gåsefjord, and OG = Outer Gåsefjord) the subject was found<b>Buzz:</b> 1 if a terminal buzz was begun at that time by the whale carrying the tag, 0 otherwise.<b>Call:</b> 1 if a call was begun at that time by the whale carrying the tag or another whale, 0 otherwise.<br>Permission for capturing, handling, and tagging of narwhals was provided by the Government of Greenland (Case ID 2010-035453, document number 429 926). The project was reviewed and approved by the IACUC of the University of Copenhagen (17 June 2015). Access and permits to use land facilities in Scoresby Sound were provided by the Government of Greenland. <br><br>
DOI: 10.5281/zenodo.5136740
title: CoVaxxy Tweet IDs data set

description: A collection of Tweet IDs related to Covid-19 Vaccines, gathered from Twitter since Jan 4, 2021. Please see https://arxiv.org/abs/2101.07694 for more information.
DOI: 10.3886/e146001
title: Disclosure of depression - third party attitudes

description: This archive contains the data reported in the following paper.<br><br>Burke, S. E., Wang, K., & Dovidio, J. F. (2014). Witnessing disclosure of depression: Gender and attachment avoidance moderate interpersonal evaluations. Journal of Social and Clinical Psychology, 33(6), 536–559. https://doi.org/10.1521/jscp.2014.33.6.536<br><br>The paper describes two main studies, referred to as Study 1 and Study 2. We ran a third study and described it only in a footnote (footnote 2 on page 552). The data files for all three studies are in their respective folders here.<br><br>Data were collected via Amazon Mechanical Turk from 2011 to 2013. Study 1 took place from 2011-11-20 to 2011-11-29, Study 2 from 2012-02-15 to 2012-04-09, and the study in the footnote from 2013-04-09 to 2013-04-24.<br><br>In all three data files, values of -99 indicate that the participant saw the item but chose not to respond to it.<br><br>I recognize that the documentation of this project could be more detailed. I have many projects that could benefit from additional public documentation. If you are using the data, please reach out to me via email and I can prioritize sharing more information about this one. My most up-to-date email address should be available at saraemilyburke.com/contact.html.<br><br>Here is the abstract of the paper referenced above:<br><br>People with depression often face the decision of whether or not to disclose their condition to others. Although much is known about how people tend to respond as recipients of emotional disclosure, third-party perceptions of disclosers have remained largely unexamined despite the fact that everyday disclosure conversations typically happen in the context of larger social networks in which some people already know about the stigmatized condition. The present work investigated how gender and attachment avoidance, two individual difference variables commonly implicated in interpersonal evaluations, moderate the responses of third-party observers to information concerning depression disclosure decisions. Across two studies, U.S. adults evaluated a target who chose to disclose or conceal some stigmatizing information. In Study 1, the type of stigma was manipulated (depression versus chronic physical pain), and the target ratings were compared across participant gender. In Study 2, all participants read scenarios featuring a target with depression and completed a measure of attachment styles. We found that, while women in general and men low in attachment avoidance evaluated depression disclosers more positively than concealers, men high in attachment avoidance preferred concealment over disclosure. These results illustrate the complexity surrounding the decision of disclosing depression and other emotion-laden stigmatizing information.<br><br>
DOI: 10.3886/e146001v1
title: Disclosure of depression - third party attitudes

description: This archive contains the data reported in the following paper.<br><br>Burke, S. E., Wang, K., & Dovidio, J. F. (2014). Witnessing disclosure of depression: Gender and attachment avoidance moderate interpersonal evaluations. Journal of Social and Clinical Psychology, 33(6), 536–559. https://doi.org/10.1521/jscp.2014.33.6.536<br><br>The paper describes two main studies, referred to as Study 1 and Study 2. We ran a third study and described it only in a footnote (footnote 2 on page 552). The data files for all three studies are in their respective folders here.<br><br>Data were collected via Amazon Mechanical Turk from 2011 to 2013. Study 1 took place from 2011-11-20 to 2011-11-29, Study 2 from 2012-02-15 to 2012-04-09, and the study in the footnote from 2013-04-09 to 2013-04-24.<br><br>In all three data files, values of -99 indicate that the participant saw the item but chose not to respond to it.<br><br>I recognize that the documentation of this project could be more detailed. I have many projects that could benefit from additional public documentation. If you are using the data, please reach out to me via email and I can prioritize sharing more information about this one. My most up-to-date email address should be available at saraemilyburke.com/contact.html.<br><br>Here is the abstract of the paper referenced above:<br><br>People with depression often face the decision of whether or not to disclose their condition to others. Although much is known about how people tend to respond as recipients of emotional disclosure, third-party perceptions of disclosers have remained largely unexamined despite the fact that everyday disclosure conversations typically happen in the context of larger social networks in which some people already know about the stigmatized condition. The present work investigated how gender and attachment avoidance, two individual difference variables commonly implicated in interpersonal evaluations, moderate the responses of third-party observers to information concerning depression disclosure decisions. Across two studies, U.S. adults evaluated a target who chose to disclose or conceal some stigmatizing information. In Study 1, the type of stigma was manipulated (depression versus chronic physical pain), and the target ratings were compared across participant gender. In Study 2, all participants read scenarios featuring a target with depression and completed a measure of attachment styles. We found that, while women in general and men low in attachment avoidance evaluated depression disclosers more positively than concealers, men high in attachment avoidance preferred concealment over disclosure. These results illustrate the complexity surrounding the decision of disclosing depression and other emotion-laden stigmatizing information.<br><br>
DOI: 10.3886/e145981
title: Need for structure: Categorizing ambiguous items as art or not art

description: In four studies, I attempted to use an art categorization task to temporarily manipulate participants' need for structure, and possibly their attitudes toward bisexual people. The task involved categorizing ambiguous or unambiguous items as "art" or "not art."<br><br>Data were collected via Amazon Mechanical Turk in July and August 2013. Study 1 took place on 2013-07-08, Study 2 on 2013-07-24, Study 3 from 2013-08-01 to 2013-08-02, and Study 4 on 2013-08-12.<br>In all data files, a value of -99 indicates that the participant saw the item in question but did not respond to it.<br><br>I recognize that the documentation of this project could be more detailed. I have many projects that could benefit from additional public documentation. If you are using the data, please reach out to me via email and I can prioritize sharing more information about this one. My most up-to-date email address should be available at saraemilyburke.com/contact.html.<br><br><br>
DOI: 10.3886/e145981v2
title: Need for structure: Categorizing ambiguous items as art or not art

description: In four studies, I attempted to use an art categorization task to temporarily manipulate participants' need for structure, and possibly their attitudes toward bisexual people. The task involved categorizing ambiguous or unambiguous items as "art" or "not art."<br><br>Data were collected via Amazon Mechanical Turk in July and August 2013. Study 1 took place on 2013-07-08, Study 2 on 2013-07-24, Study 3 from 2013-08-01 to 2013-08-02, and Study 4 on 2013-08-12.<br>In all data files, a value of -99 indicates that the participant saw the item in question but did not respond to it.<br><br>I recognize that the documentation of this project could be more detailed. I have many projects that could benefit from additional public documentation. If you are using the data, please reach out to me via email and I can prioritize sharing more information about this one. My most up-to-date email address should be available at saraemilyburke.com/contact.html.<br><br><br>
DOI: 10.18119/n9vp5b
title: BRCA1 interactome
DOI: 10.18119/n9r010
title: HNSCC_DIS
DOI: 10.18119/n9m89j
title: MDA231_All_PPI&gt;=0.9
DOI: 10.6084/m9.figshare.6217754.v1
title: Database for paper "Spatial and temporal patterns of sound production in East Greenland narwhals"

description: These data were used in the statistical analyses presented in the PLoS ONE paper "Spatial and temporal patterns of sound production in East Greenland narwhals". Please consult the paper for the methodology. The database includes 6 columns with the following information:<b><br></b><b>Datetime:</b> date and time.<b><br></b><b>Ind:</b> individual, by name (see paper).<br><b>Depth:</b> diving depth, in meters. Negative depths are considered surface.<b>Area:</b> in which of the four areas defined in the paper (F = Fønfjord, O or Ø = Øfjord, G = Gåsefjord, and OG = Outer Gåsefjord) the subject was found<b>Buzz:</b> 1 if a terminal buzz was begun at that time by the whale carrying the tag, 0 otherwise.<b>Call:</b> 1 if a call was begun at that time by the whale carrying the tag or another whale, 0 otherwise.<br>Permission for capturing, handling, and tagging of narwhals was provided by the Government of Greenland (Case ID 2010-035453, document number 429 926). The project was reviewed and approved by the IACUC of the University of Copenhagen (17 June 2015). Access and permits to use land facilities in Scoresby Sound were provided by the Government of Greenland. <br><br>
DOI: 10.18119/n9gg67
title: Shared interactions between MCF7 and MDA-MB-231 cells
DOI: 10.18119/n9701b
title: MCF10A_specific_PPI&gt;=0.9
DOI: 10.18119/n9389w
title: MCF7_specific_PPI&gt;=0.9
DOI: 10.18119/n9zg6k
title: MDA231_specific_PPI&gt;=0.9
DOI: 10.18119/n9ts4p
title: MCF10A_All_PPI&gt;=0.9
DOI: 10.18119/n9q01p
title: MCF7_All_PPI&gt;=0.9
DOI: 10.18119/n9k897
title: MDA231_BRCA1_PPI&gt;=0.65
DOI: 10.6084/m9.figshare.15050367
title: Cantos de las ranas y los sapos de Colombia

description: Listado de la literatura publicada de los cantos de anuncio de las especies de ranas y sapos con ditribución en Colombia
DOI: 10.18119/n9fg79
title: NeST map - main model
DOI: 10.18119/n99s3n
title: Integrated association score (IAS) network, NeST project
DOI: 10.6084/m9.figshare.15050415.v1
title: Code: Observer Model from An observer model of tilt perception, sensitivity and confidence

description: Matlab code for our observer model of tilt perception, sensitivity and confidence
DOI: 10.6084/m9.figshare.15050415
title: Code: Observer Model from An observer model of tilt perception, sensitivity and confidence

description: Matlab code for our observer model of tilt perception, sensitivity and confidence
DOI: 10.48544/b64f811b-95b4-4d3f-89d6-2233c40fc7c6
title: SERF Java Exercise Bank