cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5255/ukda-sn-857606
title: Experts, Expertise and Citizen Science: A Case Study of Air Quality Monitoring, 2021-2024

description: Environmental controversies are often about knowledge and expertise as much as they are about politics, rights and life chances. The reason is that the evidence produced by the different groups involved is often part of the controversy, with disputes over what is known and not known, by whom, and with what degree of accuracy being a source of tension rather than consensus. 

Community groups are responding to these challenges through new forms of citizen science in which they collect new data that can be used to contest decisions that affect their lives and communities. In this project, we worked with one such group to monitor air quality and to improve their local environment. This involved supporting, and reporting on, their work to deploy monitoring equipment and build community networks as well as examining how these efforts are received by others. Interviews were conducted with a cross-section of actors and groups with a stake in the project. These included the local civil society group, policy makers and representatives of other relevant organisations. 

These interviews allowed participants to articulate their own perspective and experience and enable the project team to understand how different kinds of expertise are – and/or should be – valued within decision-making activities.
DOI: 10.5255/ukda-sn-857604
title: Shifting Forms of Governance and the Grassroots Politics of Separatism, 2022-2024

description: This project undertook comparative case studies in regions where separatist movements are in flux to understand perceptions of, and engagement in, separatist conflicts from the bottom-up. In-depth unstructured interviews were undertaken with individuals in Catalonia (Spain), Scotland and Wales to explore individuals’ perceptions of, and responses to, debates about secession. Participants were asked to take four photographs that captured their thoughts and feelings on the topic of 'independence'. These photographs were then discussed in a follow-up interview.
DOI: 10.5255/ukda-sn-857603
title: Trust, Human Rights and Civil Society Within Mixed Economies of Welfare, 2020-2021

description: This project examined the issues, progress and challenges facing Civil Society Organisations as they deliver, and shape, welfare and press for the advancement of human rights. We examined developments in domiciliary and community based adult social care. In particular, we explore policy developments and practice in Wales, Scotland, England and Northern Ireland, looking to provide new insights into the territorialisation of welfare in the wake of devolution in the UK in 1998/9. In turn this tells us about the efficacy of different welfare mixes and policy divergence in a quasi-federal UK. The original data gathering associated with this work involves multiple semi-structured interviews with national and local third sector organisations concerned with social care delivery, complemented by interviews with regulatory and other state bodies. A key research question is: ‘how do third sector organisations perceive the issues, progress and challenges of their welfare delivery role?’. In the wake of the pandemic, we also sought practitioners’ views on the impact of the COVID-19 emergency on third sector organisations’ social care delivery and how responses were also shaped by the unique context found in each of the four nations.
DOI: 10.5281/zenodo.14727427
title: Cut&RUN P300 Control Primary mouse hepatocytes

description: Pre-processed CUT&RUN files for P300 were normalized to effective genome size.For each file, background signal was calculated in heterochromatin regions using negativeATAC-seq signal mask, and subsequently removed from the overall coverage. 

Peak calling on each replicate was performed using MACS252 v.2.2.7.1, and theconsensus overlapping peaks between all replicates were considered as reproducible for thecorresponding dataset. Number of overlapping peaks between conditions was calculated in Rwith subsetByOverlaps (GenomicRanges v.1.54.1)57, and nearest genes were annotated topeaks using biomaRt. Promoter regions of those genes (± 1kb TSS) were extracted using the Rsubread v.2.16.0) package, and the CUT&RUN signal was quantified with multiBigwigSummary from deepTools package.
DOI: 10.5281/zenodo.14727428
title: Cut&RUN P300 Control Primary mouse hepatocytes

description: Pre-processed CUT&RUN files for P300 were normalized to effective genome size.For each file, background signal was calculated in heterochromatin regions using negativeATAC-seq signal mask, and subsequently removed from the overall coverage. 

Peak calling on each replicate was performed using MACS252 v.2.2.7.1, and theconsensus overlapping peaks between all replicates were considered as reproducible for thecorresponding dataset. Number of overlapping peaks between conditions was calculated in Rwith subsetByOverlaps (GenomicRanges v.1.54.1)57, and nearest genes were annotated topeaks using biomaRt. Promoter regions of those genes (± 1kb TSS) were extracted using the Rsubread v.2.16.0) package, and the CUT&RUN signal was quantified with multiBigwigSummary from deepTools package.
DOI: 10.5255/ukda-sn-857610
title: Foundational Economy, Citizenship and New Forms of Common Ownership, 2021-2022

description: This project explored place-based solutions and experiments with social mechanisms and new institutional forms that provide the material basis for citizenship. It looks at how Foundational Economy approaches can promote civic gain and address contemporary social and economic policy concerns at regional and local levels, focusing on food and the environment. To explore these concepts, interviews were conducted with activists and practitioners of Community-Supported Agriculture projects in the United Kingdom, Germany and Italy.
DOI: 10.5255/ukda-sn-857607
title: New Repertoires of Contention and Social Mobilisation: Shifting Dynamics of Civic Stratification and the Marketisation of Social Justice in the Energy Transition, 2023-2024

description: This project utilised comparative case studies in the United Kingdom and Australia to explore how new, technologically-enabled, transnational repertoires of social mobilisation contribute to the shifting dynamics of civic stratification in the age of uncertainty. It interrogated the relationship between the state, the market, individuals and civil society in the politics of the energy transition, specifically focusing on transitions from fossil fuels to sustainable post-carbon resources. Interviews were undertaken with activists in national and local campaign groups and local stakeholders in case study areas in Australia and the United Kingdom.
DOI: 10.5255/ukda-sn-857608
title: Trade Unions, Grass Roots Activism and Solidarity, 2022-2023

description: This project investigated the impact of privatisation and social partnership on the labour process and trade union organizing, using the Royal Mail and the Communication Workers Union as a case study. In-depth one-to-one interviews were conducted with postal workers and local and regional trade union representatives across Wales during the strike period from August 2022 to June 2023. Follow up interviews were conducted with Communication Workers Union representatives following the cessation of the strike and the signing of the agreement during the summer of 2023.
DOI: 10.5281/zenodo.14679981
title: Improving Undergraduate Scientific Explanations - Oceans Content Knowledge Data

description: Student pre- and post-survey data on oceanography content knowledge from NSF IUSE project #2021347
DOI: 10.5281/zenodo.14679982
title: Improving Undergraduate Scientific Explanations - Oceans Content Knowledge Data

description: Student pre- and post-survey data on oceanography content knowledge from NSF IUSE project #2021347
DOI: 10.5281/zenodo.14727460
title: Improving Undergraduate Scientific Explanations - Oceans Content Knowledge Data

description: Student pre- and post-survey data on oceanography content knowledge from NSF IUSE project #2021347
DOI: 10.5281/zenodo.14679930
title: Improving Undergraduate Scientific Explanations - Student Exams Data

description: Improving Undergraduate Scientific Explanations - Student Exams Data
DOI: 10.5281/zenodo.14679931
title: Improving Undergraduate Scientific Explanations - Student Exams Data

description: Improving Undergraduate Scientific Explanations - Student Exams Data
DOI: 10.5255/ukda-sn-857613
title: Machines, Platforms and Capabilities, 2019-2020

description: This project utilised mixed methods to examine the significance of different sectors of the gig economy within local labour markets, and includes the study of co-operative alternatives to more dominant forms of platform capitalism. Participants included drivers from a cooperative taxi company and cycle couriers employed by digital platforms, all working in Cardiff, South Wales. Interviews explored the participant’s experiences of job quality, patterns and routines in their area of employment. This research was conducted during the COVID-19 pandemic, and the interviews also provide a snapshot of working in this sector during this period. In addition to the interviews, ethnographic analysis of cycle couriers’ daily routines was undertaken by accompanying them by bicycle. These journeys were recorded using GPS devices.
DOI: 10.5255/ukda-sn-857612
title: Civil Society, and Place-Based Strategies for Sustainable Development, 2022-2024

description: This project undertook regional policy studies in Wales, the UK and Europe and action research in specific foundational sectors. Drawing on place-based social innovation approaches, it considers to what extent regional growth policies focus on foundational sectors and address inclusive growth through social innovation. In-depth interviews were undertaken in four case study countries: Croatia, the Netherlands, Spain and the United Kingdom with participants drawn from the governance structures and various sub-groups of economic and social development.
DOI: 10.17632/9mbfj2bg2y.1
title: Supplemental Data: Silver-Russell syndrome secondary to rare (epi)genotypes display diverse phenotypes and frequently do not fulfil clinical diagnostic criteria

description: We aimed to evaluate the suitability of SRS as an umbrella term for these (epi)genotypes by identifying key clinical features and assessing the validity of NH-CSS. An extensive literature search identified 17 CDKN1C, 21 IGF2, 17 HMGA2 and 10 PLAG1 monogenic defects. Clinical phenotypes including the NH-CSS criteria were interrogated to assess (dis)similarity between the molecular subgroups of SRS, including grouped imprinted (common and monogenic) and non imprinted monogenic molecular causes. The NH-CSS poorly identified monogenic SRS. The diverse clinical features of PLAG1, CDKN1C, HMGA2 and IGF2 defects hinders the clinical diagnosis, and these rarer (epi)genotypes could be considered as distinct entities.
DOI: 10.5255/ukda-sn-857634
title: How Good is my Job: Waves 1-3, 2018-2024

description: This data provides evidence on non-pecuniary job quality in the United Kingdom. It is based on quiz data collected from almost 150 thousand individuals via the online job quiz: www.howgoodismyjob.com. The data was collected during 3 Waves. Wave 1 was undertaken between July 2018–January 2020 during which approximately 49,600 people responded to the quiz. Wave 2 was undertaken between May–August 2022 during which time approximately 50,800 responded. A third Wave was undertaken between July and September 2024 when approximately 43,800 responded. The development of the job quality quiz and Wave 1 of data collection was funded by Cardiff University’s ESRC Impact Acceleration Account (ES/M500422/1). Wave 2 of the quiz was supported by the ESRC's PrOPEL Hub (ES/T001771/1). Wave 3 was supported by WISERD's Civil Society Research Programme funded by the ESRC (ES/S012435/1).
DOI: 10.15468/dl.zahb75
title: Occurrence Download

description: A dataset containing 184 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Month is one of (January, February, March, April, May, June, July, August, September, October, November, December)",
 "TaxonKey is Spodoptera cosmioides Walker, 1858"
 ]
}

 The dataset includes 184 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003001-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.76ubs6
title: Occurrence Download

description: A dataset listing the 20 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Polylepis Ruiz & Pav."
 ]
}

 The dataset's 20 records were derived from 59 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002979-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sfu354
title: Occurrence Download

description: A dataset containing 234 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Country is one of (United States of America)",
 "Year is greater than or equal to 1904",
 "Year is less than or equal to 1994",
 "TaxonKey is Macrothelypteris torresiana (Gaudich.) Ching"
 ]
}

 The dataset includes 234 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003002-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/7cbwm57pcd.1
title: Dataset and code for "Physiotherapists' attitudes and beliefs about pain treatment influence their visual assessment of posture in individuals with neck pain"

description: Datasets and R scripts to analyse eye-tracking data acquired during visual inspection task of photos of individuals with/without neck pain.
DOI: 10.17632/7cbwm57pcd.2
title: Dataset and code for "Physiotherapists' attitudes and beliefs about pain treatment influence their visual assessment of posture in individuals with neck pain"

description: Datasets and R scripts to analyse eye-tracking data acquired during visual inspection task of photos of individuals with/without neck pain.
DOI: 10.17632/7cbwm57pcd.3
title: Dataset and code for "‘Seeing pain differently’: The impact of physiotherapists’ attitudes and treatment beliefs on postural assessment in neck pain—An eye-tracking study"

description: Datasets and R scripts to analyse eye-tracking data acquired during visual inspection task of photos of individuals with/without neck pain.
DOI: 10.17632/8gzj9fhyt8.1
title: Mycotoxins in Selected Cereals Sampled Across Ghana, Exposures and Risk Assessment

description: This study sought to determine and present a mycotoxin contamination profile of cereals sampled from cereal growing communities along three defined value chain points. It contains detailed LC-MS/MS information, calibration curves and the conditions for running the chromatography. 
The is information on the frequency of occurrence and profile of each mycotoxin, their concentrations and co-occurrence with other mycotoxins at the value chain points. The exposures and risks (studied as MoE, HQ and HI) were determined based on regulatory models to complete the profiles of the toxins. The results showed a high occurrence of FB1 relative to other mycotoxins.
DOI: 10.17632/8gzj9fhyt8.2
title: Mycotoxins in Selected Cereals Sampled Across Ghana, Exposures and Risk Assessment

description: This study sought to determine and present a mycotoxin contamination profile of cereals sampled from cereal growing communities along three defined value chain points. It contains detailed LC-MS/MS information, calibration curves and the conditions for running the chromatography. 
The is information on the frequency of occurrence and profile of each mycotoxin, their concentrations and co-occurrence with other mycotoxins at the value chain points. The exposures and risks (studied as MoE, HQ and HI) were determined based on regulatory models to complete the profiles of the toxins. The results showed a high occurrence of FB1 relative to other mycotoxins.
DOI: 10.15468/dl.3vk32d
title: Occurrence Download

description: A dataset containing 516585 records in GBIF matching the query:
SELECT specieskey, COUNT(specieskey), waterbody
 FROM occurrence
 WHERE
 specieskey IS NOT NULL
 AND waterbody IS NOT NULL
 AND occurrencestatus = 'PRESENT'
 AND (
 basisofrecord = 'HUMAN_OBSERVATION'
 OR basisofrecord = 'MACHINE_OBSERVATION'
 OR basisofrecord = 'OCCURRENCE'
 OR basisofrecord = 'LIVING_SPECIMEN'
 OR basisofrecord = 'MATERIAL_SAMPLE'
 )
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE') AND datasetkey NOT IN ('ebd01d3e-5e9a-4e80-8ae2-1dfe9a032bf7', '6276fa08-f762-11e1-a439-00145eb45e9a', 'c8fb4ced-0374-46f7-8c03-5eb5a6b70640', '12464931-e8ea-4437-b6df-c280e063b107', 'b7ef1d60-b0a0-11dd-aa14-b8a03c50a862', '10fe7809-00b8-45ed-b743-963520ea7680', '5bc157a5-d52f-4be1-918b-c2950c5e742c', '00cbf1a4-5437-4902-84c8-17643eac3c8c', '0360c673-20fc-420a-845a-05d20f185dcf', '2ddded16-5565-45ee-8aa1-1b8118fa361f') 
 GROUP BY specieskey, waterbody

 The dataset's 516585 records were derived from 2349 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002961-250121130708018/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10829474
title: Necessary data for PleioVar

description: Necessary data to run PleioVar on your own GWAS data. 

Most of the files come from and are actually needed to run LHC-MR.
DOI: 10.15468/dl.uj9sp2
title: Occurrence Download

description: A dataset containing 145 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Krigia occidentalis Nutt."
 ]
}

 The dataset includes 145 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053297-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m33mnn
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Bacteria from Penguin Guano, Antarctica"
 ]
}

 The dataset includes 70 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0071951-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10829357
title: Necessary data for PleioVar

description: Necessary data to run PleioVar.
DOI: 10.5281/zenodo.11395695
title: ERA5-Land selected indicators daily aggregates for Africa, 1988

description: This deposit contains NetCDF files with daily aggregates from Copernicus Era5-Land for eight selected indicators, covering Africa for 1988.

Each file represents one indicator aggregation for one month of the year. Inside each NetCDF file, the layers contain the daily aggregates.

For 2m dewpoint pressure, 10m u-component of wind, 10m v-component of wind, surface pressure, the mean function was used for aggregation. For total precipitation, the sum function was used for aggregation. For 2m temperature, the functions maximum, mean, and minimum were used for aggregation.

Those files were created using the KrigR package.
DOI: 10.5281/zenodo.11395696
title: ERA5-Land selected indicators daily aggregates for Africa, 1988

description: This deposit contains NetCDF files with daily aggregates from Copernicus Era5-Land for eight selected indicators, covering Africa for 1988.

Each file represents one indicator aggregation for one month of the year. Inside each NetCDF file, the layers contain the daily aggregates.

For 2m dewpoint pressure, 10m u-component of wind, 10m v-component of wind, surface pressure, the mean function was used for aggregation. For total precipitation, the sum function was used for aggregation. For 2m temperature, the functions maximum, mean, and minimum were used for aggregation.

Those files were created using the KrigR package.
DOI: 10.5281/zenodo.10829652
title: Necessary data for PRISM

description: Necessary data to run PRISM on your own GWAS data. 

Most of the files come from and are actually needed to run LHC-MR.
DOI: 10.15468/dl.d7yvs7
title: Occurrence Download

description: A dataset containing 91329 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Ministerio de Medio Ambiente, y Medio Rural y Marino. Dirección General de Medio Natural y Política Forestal. Inventario Nacional de Biodiversidad 2007, Mamíferos"
 ]
}

 The dataset includes 91329 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076249-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10829356
title: Necessary data for PRISM

description: Necessary data to run PRISM on your own GWAS data. 

Most of the files come from and are actually needed to run LHC-MR.
DOI: 10.5281/zenodo.10829548
title: Necessary data for PleioVar

description: Necessary data to run PleioVar on your own GWAS data. 

Most of the files come from and are actually needed to run LHC-MR.
DOI: 10.5281/zenodo.11395717
title: 20231220-MTOA: Multitasking agent populations can achieve equitable task exploration to the detriment of their agents' average and maximum accuracy.

description: This archive contains the results of a multi-agent simulation experiment [1] carried out with Lazy lavender [2] environment.Experiment Label: 20231220-MTOAExperiment design: Agents improve task equitability by favoring the reproduction of agents with rare and conflicting knowledge.Experiment setting: Each agent is initially trained on all tasks. The agents then carry all tasks. When they disagree the following take place:

(a) The agent with the lower score will adapt its knowledge accordingly. If its memory limit is attained, the agent will try to forget knowledge.

(b) The agent with the highest score will decide for both agents. If this agent's decision is correct, the agent will receive the points corresponding to both agents.

Every 20000 games, 9 new agents are born and 9 agents are removed. Each new agent will be trained with examples provided by two parents.The first parent is selected either randomly, or based on their collected points/success rate (low success rate, high success rate, low points, high points).

The second parent is selected based on its success rate with respect to the first parent (parent 2 is the the agent that agrees more often with parent 1).Agents undertake 3 tasks having a limited memory, enough for learning 1/3 tasks accurately (4 and 12 classes respectively)

Hypotheses: Favoring the reproduction of agents with the lowest success rate (agents that agree less with their peers) will allow agent populations to equally explore all tasks. Hence, agent populations will become equally accurate on all tasks and thus improve their efficiency.Detailed information can be found in index.html or notebook.ipynb.[1] https://sake.re/20231220-MTOA[2] https://gitlab.inria.fr/moex/lazylav/