cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.13807208
title: Supplementary data 5.4: Sapovirus plasmid insert for DNA control

description: A fasta file which presents the sequence for the Sapovirus insert within the pMA-T plasmid. This plasmid formed the sapovirus control.
DOI: 10.6084/m9.figshare.13807208.v1
title: Supplementary data 5.4: Sapovirus plasmid insert for DNA control

description: A fasta file which presents the sequence for the Sapovirus insert within the pMA-T plasmid. This plasmid formed the sapovirus control.
DOI: 10.6084/m9.figshare.13806974
title: Supplementary data 3.8: MS2 Escherichia phage alignment file

description: An alignment file of a genome of MS2 Escherichia bacteriophage alongside the primers and probe for the Jothikumar (2006) HEV assay. The primers and probe did not align successfully.
DOI: 10.6084/m9.figshare.13806974.v1
title: Supplementary data 3.8: MS2 Escherichia phage alignment file

description: An alignment file of a genome of MS2 Escherichia bacteriophage alongside the primers and probe for the Jothikumar (2006) HEV assay. The primers and probe did not align successfully.
DOI: 10.6084/m9.figshare.13359710
title: Supplementary data 3.7: Piscine Norhabdovirus (VHSV) alignment

description: An alignment file of a genome of Piscine Norhabdovirus alongside the primers and probe for the Jothikumar (2006) HEV assay. The primers and probe did not align successfully.
DOI: 10.6084/m9.figshare.13359710.v1
title: Supplementary data 3.7: Piscine Norhabdovirus (VHSV) alignment

description: An alignment file of a genome of Piscine Norhabdovirus alongside the primers and probe for the Jothikumar (2006) HEV assay. The primers and probe did not align successfully.
DOI: 10.6084/m9.figshare.13359686
title: Supplementary data 3.6: Sapovirus alignment file

description: An alignment of a genome of mengo virus alongside the primers and probe for the Jothikumar (2006) HEV assay. The primers and probe did not align successfully.
DOI: 10.6084/m9.figshare.13359686.v1
title: Supplementary data 3.6: Sapovirus alignment file

description: An alignment of a genome of mengo virus alongside the primers and probe for the Jothikumar (2006) HEV assay. The primers and probe did not align successfully.
DOI: 10.6084/m9.figshare.13359677
title: Supplementary data 3.5: Mengo virus alignment

description: An alignment file with a genome of mengo virus alongside the primers and probe for the Jothikumar (2006) HEV assay. The primers and probe did not align successfully.
DOI: 10.6084/m9.figshare.13359677.v1
title: Supplementary data 3.5: Mengo virus alignment

description: An alignment file with a genome of mengo virus alongside the primers and probe for the Jothikumar (2006) HEV assay. The primers and probe did not align successfully.
DOI: 10.6084/m9.figshare.13359662
title: Supplementary data 3.4: Human Betaherpes 5 alignment

description: An alignment file with a genome of Epstein-Barr virus alongside the primers and probes for the Jothikumar (2006) HEV assay. The primers and probe do not align successfully.
DOI: 10.6084/m9.figshare.13359662.v1
title: Supplementary data 3.4: Human Betaherpes 5 alignment

description: An alignment file with a genome of Epstein-Barr virus alongside the primers and probes for the Jothikumar (2006) HEV assay. The primers and probe do not align successfully.
DOI: 10.6084/m9.figshare.13359626
title: Supplementary data 3.3: Epstein-Barr Virus Alignment

description: An alignment file of a Epstein-Barr virus genome alongside the primers and probe for the Jothikumar (2006) HEV assay. The primers and probe do not successfully align.
DOI: 10.6084/m9.figshare.13359623
title: Supplementary data 3.2: Coronavirus (SARS-CoV-2) alignment

description: This data shows an alignment of a Coronavirus (Sars-CoV-2) genome alongside the primers and probe for the Jothikumar (2006) HEV assay. The primers did not successfully align.
DOI: 10.6084/m9.figshare.13359623.v1
title: Supplementary data 3.2: Coronavirus (SARS-CoV-2) alignment

description: This data shows an alignment of a Coronavirus (Sars-CoV-2) genome alongside the primers and probe for the Jothikumar (2006) HEV assay. The primers did not successfully align.
DOI: 10.6084/m9.figshare.13359605
title: Supplementary data 3.1: Astrovirus alignment

description: This figure shows an astrovirus genome aligned with the Jothikumar (2006) HEV assay primers and probe. It is clear from this FASTA file that the primers and probe do not align correctly. Aligned using a CLUSTAL multiple sequence alignment.
DOI: 10.6084/m9.figshare.13359605.v1
title: Supplementary data 3.1: Astrovirus alignment

description: This figure shows an astrovirus genome aligned with the Jothikumar (2006) HEV assay primers and probe. It is clear from this FASTA file that the primers and probe do not align correctly. Aligned using a CLUSTAL multiple sequence alignment.
DOI: 10.5519/qd.v9nls17p
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (31 records)
DOI: 10.5517/ccdc.csd.cc28x3y8
title: CCDC 2112400: Experimental Crystal Structure Determination

description: Related Article: Su-Juan Yao, Ning Li, Jiang Liu, Long-Zhang Dong, Jing-Jing Liu, Zhi-Feng Xin, Dong-Sheng Li, Shun-Li Li, Ya-Qian Lan|2022|Inorg.Chem.|61|2167|doi:10.1021/acs.inorgchem.1c03368
DOI: 10.5517/ccdc.csd.cc28x3z9
title: CCDC 2112401: Experimental Crystal Structure Determination

description: Related Article: Su-Juan Yao, Ning Li, Jiang Liu, Long-Zhang Dong, Jing-Jing Liu, Zhi-Feng Xin, Dong-Sheng Li, Shun-Li Li, Ya-Qian Lan|2022|Inorg.Chem.|61|2167|doi:10.1021/acs.inorgchem.1c03368
DOI: 10.5517/ccdc.csd.cc297pdn
title: CCDC 2122551: Experimental Crystal Structure Determination

description: Related Article: Changxia Shi, Ryan W. Clarke, Michael L. McGraw, Eugene Y.-X. Chen|2022|J.Am.Chem.Soc.|144|2264|doi:10.1021/jacs.1c12278
DOI: 10.5517/ccdc.csd.cc295kqs
title: CCDC 2120515: Experimental Crystal Structure Determination

description: Related Article: Hong-Qing Li, Yu-Chen Sun, Le Shi, Feng-Li Chen, Fu-Xing Shen, Yue Zhao, Xin-Yi Wang|2022|Inorg.Chem.|61|2272|doi:10.1021/acs.inorgchem.1c03639
DOI: 10.5517/ccdc.csd.cc295krt
title: CCDC 2120516: Experimental Crystal Structure Determination

description: Related Article: Hong-Qing Li, Yu-Chen Sun, Le Shi, Feng-Li Chen, Fu-Xing Shen, Yue Zhao, Xin-Yi Wang|2022|Inorg.Chem.|61|2272|doi:10.1021/acs.inorgchem.1c03639
DOI: 10.5517/ccdc.csd.cc295ksv
title: CCDC 2120517: Experimental Crystal Structure Determination

description: Related Article: Hong-Qing Li, Yu-Chen Sun, Le Shi, Feng-Li Chen, Fu-Xing Shen, Yue Zhao, Xin-Yi Wang|2022|Inorg.Chem.|61|2272|doi:10.1021/acs.inorgchem.1c03639
DOI: 10.5517/ccdc.csd.cc29kyg9
title: CCDC 2132411: Experimental Crystal Structure Determination

description: Related Article: Weiyi Qian, Jian-Xia Xue, Jinxin Xu, Feng Li, Guang-Feng Zhou, Fang Wang, Rong-Hua Luo, Jinsong Liu, Yong-Tang Zheng, Guo-Chun Zhou|2022|Bioorg.Chem.|120|105639|doi:10.1016/j.bioorg.2022.105639
DOI: 10.5281/zenodo.6060440
title: Data for the journal article "Brown Carbon from Biomass Burning Imposes Strong Circum-Arctic Warming"

description: The data for the 3 figures in the journal article "Brown Carbon from Biomass Burning Imposes Strong Circum-Arctic Warming"
DOI: 10.5281/zenodo.6060439
title: Data for the journal article "Brown Carbon from Biomass Burning Imposes Strong Circum-Arctic Warming"

description: The data for the 3 figures in the journal article "Brown Carbon from Biomass Burning Imposes Strong Circum-Arctic Warming"
DOI: 10.34740/kaggle/dsv/3178999
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.5281/zenodo.3888005
title: HisVis: Scene Detection Pilot Training Set

description: The <em>De Boer</em> photo collection, provided by the Noord-Hollands Archief, consists of approximately two million negatives and metadata for the period 1945-2004. This training set consists of a subset of 2,545 images from the NHA online repository, an early batch of digitized images, and digitized small negatives. We took the categorization scheme for Places-365 as a starting point. We combined this scheme with information from the catalog cards that De Boer used. In making these categories, we kept in mind whether there remained a historical and visual consistency in the categories and whether the category would be of use for users of the collection. To gauge the interest of the users, we conducted several interviews. Together with archivists and cultural historians, we studied the images in the training set and settled on a categorization scheme of 159 categories. During annotation, we noticed the difficulties in distinguishing between scenes that were characterized by a particular object and scenes defined by the location or the action performed in the image.
description: The repository containes three models using different types of augmentations, as well as the training data.
DOI: 10.34740/kaggle/dsv/3179019
title: 2021 World Population (updated daily)
DOI: 10.25828/0z05-cn37
title: OHS-GHS Cross Entropy Weights 1995-2011
DOI: 10.34740/kaggle/dsv/3179192
title: COVID Vaccination in World (updated daily)
DOI: 10.6084/m9.figshare.19165082
title: Data files for a scRNA-seq project of rat testicular cells

description: This dataset contains 2 data files. 1) a Zip file containing 5 mtx data files processed from a scRNA-seq study of rat testis; 2) an Excel file containing differentially expressed gene (DEG) list of 7 cell types.
DOI: 10.5519/qd.ovhttfbz
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.6084/m9.figshare.19165883
title: Acute exercise and adolescents' attention

description: Dataset used in the publication "Effects of Acute Endurance, Strength, and Coordination Exercise Interventions on Attention in Adolescents: A Randomized Controlled Study"
DOI: 10.6084/m9.figshare.16843072.v2
title: Data from: Body Mass Index and Risk of Diabetic Nephropathy: A Mendelian Randomization Study

description: Supplemental material for "Body Mass Index and Risk of Diabetic Nephropathy: A Mendelian Randomization Study".<b>The associations of obesity and diabetic nephropathy (DN) in type 2 diabetes are inconsistent in observational studies, and causality remains unclear. To explore the causal effect of body mass index (BMI) on DN, estimated glomerular filtration rate (eGFR), and proteinuria in type 2 diabetes by a two-sample Mendelian randomization analysis.Genetic evidence showed that higher BMI levels were causally associated with increased risk of DN and decreased eGFR levels. Moreover, the increase in BMI level had a greater impact on DN risk in women.</b><br>
DOI: 10.6084/m9.figshare.16843072.v1
title: Data from: Body Mass Index and Risk of Diabetic Nephropathy: A Mendelian Randomization Study

description: Supplemental material for "Body Mass Index and Risk of Diabetic Nephropathy: A Mendelian Randomization Study".<b>The associations of obesity and diabetic nephropathy (DN) in type 2 diabetes are inconsistent in observational studies, and causality remains unclear. To explore the causal effect of body mass index (BMI) on DN, estimated glomerular filtration rate (eGFR), and proteinuria in type 2 diabetes by a two-sample Mendelian randomization analysis.Genetic evidence showed that higher BMI levels were causally associated with increased risk of DN and decreased eGFR levels. Moreover, the increase in BMI level had a greater impact on DN risk in women.</b><br>
DOI: 10.34740/kaggle/dsv/3179508
title: Omicron daily cases by country (COVID-19 variant)
DOI: 10.15151/esrf-es-670011338
title: Understanding the structure of two-dimensional metal-oragnic frameworks films

description: We developed a crystallization strategy that promotes in-plane growth of ZIF-L on nanoporous single-layer graphene, forming a few unit-cell-thick film. This 2D morphology of the MOF film allows us to achieve extremely attractive gas separation performance marked by H2 permeance over 1000 GPU accompanied with H2/N2 selectivities of over 40. While electron diffraction in TEM along the [001] zone axis seem to confirm the structure of ZIF-L, we could not obtain in-depth understanding of lattice parameter and crystallinity of the ZIF-L film, partly arising from the fact that ZIF-L is not stable under the electron beam. In particular, our interest is to understand the similarilty and differences of the novel 2d film with reference to the known 3D structure. Finally, the synthesis strategy, based on promotion of in-plane grain growth and etching of out-of-plane growth, is extremely attractive to replicate to wider range of two-dimensional MOFs and MOFs interesting for carbon capture.
DOI: 10.34740/kaggle/dsv/3179634
title: Mahanagar Yatayat Dataset
DOI: 10.3886/e114711v1-109400
title: Replication data for: Projections and Uncertainties about Climate Change in an Era of Minimal Climate Policies

description: Climate change remains one of the major international environmental challenges facing nations. Up to now, nations have adopted minimal policies to slow climate change. Moreover, there has been no major improvement in emissions trends as of the latest data. The current study uses the updated DICE model to develop new projections of trends and impacts of alternative climate policies. It also presents a new set of estimates of the uncertainties about future climate change and compares the results with those of other integrated assessment models. The study confirms past estimates of likely rapid climate change over the next century if major climate-change policies are not taken. It suggests that it is unlikely that nations can achieve the 2°C target of international agreements, even if ambitious policies are introduced in the near term. The required carbon price needed to achieve current targets has risen over time as policies have been delayed.
DOI: 10.5281/zenodo.5834511
title: Replication data for: "The hapax / type ratio: an indicator of minimally required sample size in productivity studies?"

description: The dataset accompanies the scientific article "The hapax / type ratio: an indicator of minimally required sample size in productivity studies?" and can be used to reproduce the findings presented in this article. This dataset consists of two components, namely (i) the corpus data involving the Dutch semi-copular verb "raken" and (ii) an R analysis script to reproduce the computational steps.
DOI: 10.5281/zenodo.5834510
title: Replication data for: "The hapax / type ratio: an indicator of minimally required sample size in productivity studies?"

description: The dataset accompanies the scientific article "The hapax / type ratio: an indicator of minimally required sample size in productivity studies?" and can be used to reproduce the findings presented in this article. This dataset consists of two components, namely (i) the corpus data involving the Dutch semi-copular verb "raken" and (ii) an R analysis script to reproduce the computational steps.
DOI: 10.5281/zenodo.5809204
title: Mineral composition data for oxidized metasedimentary rocks of the Aegean region

description: Mineral compositions determined using electron-probe microanalysis (EPMA) for oxidized metasedimentary rocks from the islands of Andros, Crete, Naxos, and Tinos, Aegean region, Greece. The analyses were done using the JEOL JXA-8530F field-emission gun EPMA in the Department of Earth and Planetary Sciences, Yale University. Mineral composition results are tabulated as follows. Table 1: Fe-Ti oxides; Table 2: Garnet; Table 3: Epidote; Table 4: Amphibole; Table 5: Clinopyroxene; and Table 6: Phengite. The general analytical and formula calculation procedures are described in Ague et al. (2022; see References).
description: {"references": ["Ague, J.J., Tassara, S., Holycross, M.E., Li, J.-L., Cottrell, E., Schwarzenbach, E.M., Fassoulas, C. & John, T. (2022). Slab-derived devolatilization fluids oxidized by subducted metasedimentary rocks. Nature Geoscience, https://doi.org/10.1038/s41561-022-00904-7."]}
DOI: 10.5281/zenodo.5809203
title: Mineral composition data for oxidized metasedimentary rocks of the Aegean region

description: Mineral compositions determined using electron-probe microanalysis (EPMA) for oxidized metasedimentary rocks from the islands of Andros, Crete, Naxos, and Tinos, Aegean region, Greece. The analyses were done using the JEOL JXA-8530F field-emission gun EPMA in the Department of Earth and Planetary Sciences, Yale University. Mineral composition results are tabulated as follows. Table 1: Fe-Ti oxides; Table 2: Garnet; Table 3: Epidote; Table 4: Amphibole; Table 5: Clinopyroxene; and Table 6: Phengite. The general analytical and formula calculation procedures are described in Ague et al. (2022; see References).
description: {"references": ["Ague, J.J., Tassara, S., Holycross, M.E., Li, J.-L., Cottrell, E., Schwarzenbach, E.M., Fassoulas, C. & John, T. (2022). Slab-derived devolatilization fluids oxidized by subducted metasedimentary rocks. Nature Geoscience, https://doi.org/10.1038/s41561-022-00904-7."]}
DOI: 10.6084/m9.figshare.19165990.v1
title: Additional file 1 of Differential gene expression associated with a floral scent polymorphism in the evening primrose Oenothera harringtonii (Onagraceae)

description: Additional file 1. Number of raw and clean paired reads per sample, and SRA BioSample IDs.
DOI: 10.6084/m9.figshare.19165990
title: Additional file 1 of Differential gene expression associated with a floral scent polymorphism in the evening primrose Oenothera harringtonii (Onagraceae)

description: Additional file 1. Number of raw and clean paired reads per sample, and SRA BioSample IDs.
DOI: 10.6084/m9.figshare.19165993.v1
title: Additional file 2 of Differential gene expression associated with a floral scent polymorphism in the evening primrose Oenothera harringtonii (Onagraceae)

description: Additional file 2. All GO term enrichments for each cluster of differentially expressed genes.
DOI: 10.6084/m9.figshare.19165993
title: Additional file 2 of Differential gene expression associated with a floral scent polymorphism in the evening primrose Oenothera harringtonii (Onagraceae)

description: Additional file 2. All GO term enrichments for each cluster of differentially expressed genes.
DOI: 10.6084/m9.figshare.19165999
title: Additional file 4 of Differential gene expression associated with a floral scent polymorphism in the evening primrose Oenothera harringtonii (Onagraceae)

description: Additional file 4. Floral volatile data from parental field populations of Oenothera harringtonii used to set up transcriptomics experiments in greenhouse-grown plants.
DOI: 10.6084/m9.figshare.19165999.v1
title: Additional file 4 of Differential gene expression associated with a floral scent polymorphism in the evening primrose Oenothera harringtonii (Onagraceae)

description: Additional file 4. Floral volatile data from parental field populations of Oenothera harringtonii used to set up transcriptomics experiments in greenhouse-grown plants.
DOI: 10.6084/m9.figshare.19166053
title: Additional file 1 of The prognostic and predictive value of ESR1 fusion gene transcripts in primary breast cancer

description: Additional file 1. Assays used for ESR1-CCDC170 fusion analyses. F: forward primer; R: reverse primer
DOI: 10.6084/m9.figshare.19166053.v1
title: Additional file 1 of The prognostic and predictive value of ESR1 fusion gene transcripts in primary breast cancer

description: Additional file 1. Assays used for ESR1-CCDC170 fusion analyses. F: forward primer; R: reverse primer
DOI: 10.6084/m9.figshare.19166056.v1
title: Additional file 2 of The prognostic and predictive value of ESR1 fusion gene transcripts in primary breast cancer

description: Additional file 2. Expected ESR1-CCDC170 fusion products. In blue are shown the expected sizes of fusion products while in violet are depicted aspecific products, which can be generated during RT-qPCR
DOI: 10.6084/m9.figshare.19166056
title: Additional file 2 of The prognostic and predictive value of ESR1 fusion gene transcripts in primary breast cancer

description: Additional file 2. Expected ESR1-CCDC170 fusion products. In blue are shown the expected sizes of fusion products while in violet are depicted aspecific products, which can be generated during RT-qPCR
DOI: 10.6084/m9.figshare.19166065
title: Additional file 5 of The prognostic and predictive value of ESR1 fusion gene transcripts in primary breast cancer

description: Additional file 5. Expression of ESR1 fusions and reference (ESR1 and CCDC170) genes in a panel of 54 breast cancer cell lines. Genes with expression level above the threshold are indicated in orange
DOI: 10.6084/m9.figshare.19166065.v1
title: Additional file 5 of The prognostic and predictive value of ESR1 fusion gene transcripts in primary breast cancer

description: Additional file 5. Expression of ESR1 fusions and reference (ESR1 and CCDC170) genes in a panel of 54 breast cancer cell lines. Genes with expression level above the threshold are indicated in orange
DOI: 10.6084/m9.figshare.19166068
title: Additional file 6 of The prognostic and predictive value of ESR1 fusion gene transcripts in primary breast cancer

description: Additional file 6. Details of prevalence of ESR1-CCDC170 (exon 1-11) fusion genes in the different analyzed cohorts. ESR1: Estrogen Receptor 1 gene; AI: Aromatase Inhibitor; LNP: Lymph node positive; LNN: Lymph node negative; DCIS: ductal carcinomas in situ
DOI: 10.6084/m9.figshare.19166068.v1
title: Additional file 6 of The prognostic and predictive value of ESR1 fusion gene transcripts in primary breast cancer

description: Additional file 6. Details of prevalence of ESR1-CCDC170 (exon 1-11) fusion genes in the different analyzed cohorts. ESR1: Estrogen Receptor 1 gene; AI: Aromatase Inhibitor; LNP: Lymph node positive; LNN: Lymph node negative; DCIS: ductal carcinomas in situ
DOI: 10.21227/dr5j-gs46
title: fibrosis in NAFLD 

description: one hundred fifty patients were followed up  every year for 28 years, and at each visit the characteristics of the patients were recoreded ( these are the predictors)  like:  sex( 0= female, 1= male) , age, BMI, LDL-chol, HOMA2-IR, systolic blood pressure and diastolic blood pressure. For each partipant, the recorded value is the mean of the follow up measurements. The age is the median value.  The response variables are the transition counts among the states of the process of the disease ( fibrosis in NAFLD ) evolving over time . There are 9 different transitions.  From state 0 to state 1 is denoted as lambda 01 . From state 1 to state 2  is denoted as lambda 12 . From state 2 to state 3 is denoted as lambda 23 . From state 3 to state 4 is denoted as lambda 34.  From state 1 to  state 0 is denoted as mu 10 . From state 2 to state 1 is denoted as mu 21 . From state 3 to state 2 is denoted as mu 32 . From state 2 to state 0 is denoted as mu 20  . From state 3 to state 1 is denoted as mu 31. For  all  the 150 participants,  the counts of these transitions were recoreded in this whole 28 years of follow up, in other words, how many transition counts each patient had accomplished in this 28 years . Multivariate  Poisson regression  was used to relate the predictors to these counts , thus obtaing beta coefficients and incidence rate ratios for covariates in each model discribing each transition count. Then these estimated counts obtained from running Poisson regression was fed to continous time Markov chains  ( one of the maultistate model ) to obtain the transition rate matrix and the transition probability matrix . This allow health policy makers and the medical insurance managers to estiamte the counts of a cohort of patients in the future time points , thus allocating the human and financial resources to investigate and treat patients with high risk factor to develop fibrosis in their course of the disease NAFLD . These risk factors  are obesity , type 2 diabetes , hypercholestrolemis and hypertension . Insulin resistance as measured by the HOMA2-IR is the most deleterious risk factors among these factors .