cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21233/pb3n-nr39
title: Sanya ostracode surface sample dataset

description: Raw data for the Sanya ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.23078544.v1
title: Nexus File (Extant) from Multivariate mapping of ontogeny, taphonomy and phylogeny to reconstruct problematic fossil taxa

description: Nexus file for extant taxa only
DOI: 10.6084/m9.figshare.1308460.v2
title: TimeStudio Case study

description: This is the case study workflow for TimeStudio v2.8. The workflow illustrates the basic functionality of Timestudio. The workflow reads eye tracking data from a Tobii 1750 eyetracker and extracts pupil sizes during a cognitive load task where the subject has to multiply numbers presented on a screen. Easy multiplications does not show a major response in the pupil dilation, but when the numbers increase in difficulty the pupil dilates more.
DOI: 10.17632/9dhvmhy98s
title: A recurrent chromosomal inversion suffices for driving escape from oncogene-induced senescence via subTAD reorganization. Zampetidis et al, Mol Cell.

description: unprocessed and uncompressed imaging data (microscopy, gels and blots)
DOI: 10.6084/m9.figshare.5125018.v1
title: Supplementary Material for: Gene <b>×</b> Environment Interactions in Obesity: The State of the Evidence

description: <b><i>Background/Aims:</i></b> Obesity is a pervasive and highly prevalent disease that poses substantial health risks to those it affects. The rapid emergence of obesity as a global epidemic and the patterns and distributions of the condition within and between populations suggest that interactions between inherited biological factors (e.g. genes) and relevant environmental factors (e.g. diet and physical activity) may underlie the current obesity epidemic. <b><i>Methods:</i></b> We discuss the rationale for the assertion that gene × lifestyle interactions cause obesity, systematically appraise relevant literature, and consider knowledge gaps future studies might seek to bridge. <b><i>Results:</i></b> We identified &gt;200 relevant studies, of which most are relatively small scale and few provide replication data. <b><i>Conclusion:</i></b> Although studies on gene × lifestyle interactions in obesity point toward the presence of such interactions, improved data standardization, appropriate pooling of data and resources, innovative study designs, and the application of powerful statistical methods will be required if translatable examples of gene × lifestyle interactions in obesity are to be identified. Future studies, of which most will be observational, should ideally be accompanied by appropriate replication data and, where possible, by analogous findings from experimental settings where clinically relevant traits (e.g. weight regain and weight cycling) are outcomes.
DOI: 10.17632/g5xcgwcb8k
title: Journal of Iran's Economic Essays; "Jostarhaye Eghtesadiye Iran; No. 34

description: The Journal publishes papers, including the following fields:

- Islamic economics and finance;

 - Iran's economy;

 - Fiqh (Islamic jurisprudence) and economics;

 - Philosophy of economics;

 - Economic theory;

 - Ethics;

- Islamic economic institutions

 - Islamic banking;

 - Economic development;

- Social security.
DOI: 10.17632/t8w2vsx39h
title: ERAS (Enhanced Recovery After Surgery) Protocol Improves Clinical Results Following Surgery for Choledochal Cysts in Children

description: Aim: Enhanced Recovery After Surgery (ERAS) protocol is more commonly used in adult gastrointestinal surgery, but there is a limited number of studies focusing on the pediatric population. The aim of this study is to evaluate the effectiveness and reliability of ERAS in pediatric choledochal cyst surgery.
Methods: Medical records of pediatric patients who underwent surgery for choledochal cysts between March 2008 and April 2023 were reviewed. Our clinic transitioned to the ERAS protocol in 2016. Twenty-one patients who underwent surgery between 2016 and 2023 and managed with the ERAS protocol were compared with 24 patients who underwent surgery between 2008 and 2015 without the ERAS protocol in terms of abdominal drain placement, time to first mobilization, time to achieve first and full enteral intake, and postoperative complications.
Results: Following the implementation of the ERAS protocol, there was an increase in the use of minimally invasive surgical procedures and a decrease in the placement of drains. The median time to first eating 20 h (18-44) vs 42 h (18-76); p=0,003, time to first mobilization 8h (4-24) vs 18h (4-40); p=0,01, and hospital stay 3d (2-5) vs 5d (3-7); p=0,0001 were all found to be shorter in the ERAS group. No differences were observed between the two groups in terms of early postoperative complications (p=0,21).
Conclusion: ERAS protocol is both effective and safe, facilitating faster recovery and earlier discharge without increasing the risk of early postoperative complications. Therefore, the ERAS protocol should be considered as a standard approach in the surgical management of pediatric choledochal cysts.
DOI: 10.6084/m9.figshare.25902601.v1
title: Supplementary Material for: Academic Outcomes With Hearing Amplification Devices in Children With Unilateral Hearing Loss: A Systematic Review and Narrative Synthesis

description: Background: Many studies have shown increased academic problems in children with unilateral hearing loss (UHL). However, whether hearing devices can ameliorate the educational difficulties associated with UHL is not well studied. Therefore, the objective of the current systematic review was to answer the question: Do non-surgical amplification devices, bone-anchored hearing aids, and/or cochlear implants improve academic outcomes in school-aged children and adolescents with UHL? 
Methods: Embase, MEDLINE, Scopus, CINAHL, APA PsycInfo, ClinicalTrials.gov, and Cochrane databases were searched from inception to 12/21/22. Published, peer-reviewed studies comparing academic outcomes in patients with UHL aged ≥ 5 and ≤ 19 years with and without hearing devices (non-surgical amplification devices, bone-anchored hearing aids, or cochlear implants) were included. Results of studies were qualitatively synthesized, and the risk of bias was evaluated with the Effective Public Health Practice Project (EPHPP) Quality Assessment Tool. 
Results: A total of 5,644 non-duplicate publications were identified by the search, and four studies were included for synthesis, every one of which was investigating non-surgical amplification. One small, single-arm study demonstrated significant improvement in subjective classroom listening difficulties after a 3- to 4-month trial with a BTE hearing aid. The other three studies of non-surgical amplification devices showed no benefit across multiple academic outcomes with FM systems and conventional and CROS-style hearing aids.
Discussion: The small sample sizes, heterogeneous and/or ill-defined study samples, and overall low quality of the available literature ultimately make it hard to draw definitive conclusions regarding non-surgical amplification devices’ effectiveness in improving academic outcomes in children with UHL. No articles were identified that studied cochlear implants or bone-anchored hearing aids. Further studies with high-quality study design, large sample sizes, and long-term follow-up are needed to answer this clinically important question.
DOI: 10.17632/7wvtfnpdrk
title: Demographic factors and staff preparedness to adopt internet tools for research sharing during Covid-19 Among African Universities' Scholars

description: This data is for the research on the demographic factors and staff preparedness to adopt internet tools for research sharing in African Universities during the Covid-19 Pandemic. The dataset contains information on staff age, gender, rank, academic qualifications, years of work experience, research area and country of residence, as well as the extent to which staff are willing to adopt 20 specific internet tools for research sharing during the Covid-19 pandemic. This dataset has been anonymised and does not provide any personal identification of any of the respondents .
DOI: 10.17632/x7hvx8pdtc
title: The Stigma Surrounding Mental Health Amongst Adolescents

description: The stigma surrounding mental health has been an issue for several years, and with the rise of the internet, its prevalence amongst teenagers has been on the rise. This paper looks to examine the stigma surrounding mental health by examining and presenting data collected in an anonymous survey conducted amongst 35,489 people who are between the ages of 13 and 17.
DOI: 10.6084/m9.figshare.13042838.v1
title: MALDI_DHBmetabolites_2020-09-30.txt

description: Processed data from MALDI-TOF (Rapiflex Tissuetyper) mass spectrometry imaging<br>Tissue sections: Human prostate cancer, 45 samples from 15 patients<br>Acquisition description: Positive ion mode within mass range m/z 100-1000, using DHB as matrix.<br>Data file contains: Intensities for 167 selected masses for ~188 000 spectra.<br><br>
DOI: 10.6084/m9.figshare.21617559.v1
title: Supplementary Material for: CLIPA7 Exhibits Pleiotropic Roles in the <b><i>Anopheles gambiae</i></b> Immune Response

description: Clip domain serine proteases and clip domain serine protease homologs (cSPHs) are key components of serine protease cascades that drive the melanization response. Despite lacking catalytic activity, cSPHs play essential roles in regulating melanization, but the spectrum of functions they catalyze within and outside these cascades is not fully understood. Aside from their classical role as cofactors for PPO activation, we have previously revealed an unprecedented complexity in the function and molecular organization of these cSPHs in the immune response of the malaria vector <i>Anopheles gambiae</i>. Here, we add yet another dimension to the complex roles underpinning the contributions of cSPHs to mosquito immunity by showing that CLIPA7, a member of the expanded cSPH family, defines a novel branch within the cSPH network that is essential for the melanization of <i>Escherichia coli</i> but not <i>Plasmodium</i> ookinetes or Gram-positive bacteria. Despite its dispensability for the melanization of Gram-positive bacteria, we show that CLIPA7 is required for the clearance of systemic infections with <i>Staphylococcus aureus</i>. CLIPA7 is produced by hemocytes and associates with the surfaces of live <i>E. coli</i> and <i>S. aureus</i> cells in vivo as well as with those of melanized cells. Based on its RNAi phenotypes and its unique domain architecture among <i>A. gambiae</i> cSPHs including the presence of an RGD motif, we propose that CLIPA7 exhibits pleiotropic roles in mosquito immunity that extend beyond the regulation of melanization to microbial clearance.
DOI: 10.17632/syc7jfm8mc
title: Python Code for Type I, II, and III Errors with Excel Data Build The Data & simmulation By: Prof:Eldirdiri Fadol Ibrahim Fadol

description: Types of Statistical Errors
Type I Error (False Positive):

Rejecting the null hypothesis when it is true.
Example: Concluding a drug is effective when it is not.
Mitigation: Use stricter significance levels (e.g., α = 0.01).
Type II Error (False Negative):

Failing to reject the null hypothesis when it is false.
Example: Missing the effect of a drug that actually works.
Mitigation: Increase sample size or statistical power.
Type III Error (Misinterpretation):

Correctly rejecting the null hypothesis but misinterpreting the direction of the effect.
Example: Detecting a difference between groups but misidentifying which group is superior.
Mitigation: Ensure proper group labeling and robust experimental design.
Data Simulation
Synthetic data was generated for two groups:

Experimental Group: Mean = 10, SD = 3.
Control Group: Mean = 12, SD = 3.
The data was stored in experiment_data.xlsx for further analysis.

Key Simulations and Results
1. Type I Error Simulation
Scenario: Groups with identical means (10).
Result: The null hypothesis was correctly retained (p-value = 0.521). No Type I Error occurred.
2. Type II Error Simulation
Scenario: Smaller sample size (10 observations per group) despite a true difference (means: 10 vs. 12).
Result: The null hypothesis was not rejected (p-value = 0.563). A Type II Error occurred due to insufficient sample size.
3. Type III Error Simulation
Scenario: Group means were swapped (12 vs. 10) to test misinterpretation.
Result: No statistically significant difference was detected (p-value = 0.056), avoiding a Type III Error in this case.
Insights and Recommendations
Type I Errors:

Likely with repeated tests without adjustments.
Use corrections like Bonferroni or lower α thresholds.
Type II Errors:

Caused by small sample sizes or weak effect sizes.
Conduct power analysis to determine adequate sample size.
Type III Errors:

Can occur from poor study design or mislabeling.
Double-check group assignments and carefully interpret results.
Applications
Type I Errors: Avoid false claims in drug efficacy studies.
Type II Errors: Ensure meaningful interventions are not overlooked in public health.
Type III Errors: Prevent misleading conclusions in policy-making or clinical research.
Conclusion
The simulations demonstrate how statistical errors can arise and provide insights into preventing them. By using Python for hypothesis testing, researchers can better design studies, minimize errors, and ensure reliable conclusions, improving the validity and impact of their findings.
DOI: 10.6084/m9.figshare.14617197.v1
title: Supplementary Material for: Time-Restricted Feeding Restored Insulin-Growth Hormone Balance and Improved Substrate and Energy Metabolism in MC4RKO Obese Mice

description: <b><i>Background:</i></b> Dysregulation of metabolic regulatory hormones often occurs during the progress of obesity. Key regulatory hormone insulin-growth hormone (GH) balance has recently been proposed to maintain metabolism profiles. Time-restricted feeding (TRF) is an effective strategy against obesity without detailed research on pulsatile GH releasing patterns. <b><i>Methods:</i></b> TRF was performed in an over-eating melanocortin 4 receptor-knockout (MC4RKO) obese mouse model using normal food. Body weight and food intake were measured. Series of blood samples were collected for 6-h pulsatile GH profile, glucose tolerance test, and insulin tolerance test at 5, 8, and 9 weeks of TRF, respectively. Indirect calorimetric recordings were performed by the Phenomaster system at 6 weeks for 1 week, and body composition was measured by nuclear magnetic resonance spectroscopy (NMR). Substrate- and energy metabolism-related gene expressions were measured in terminal liver and subcutaneous white adipose tissues. <b><i>Results:</i></b> TRF increased pulsatile GH secretion in dark phase and suppressed hyperinsulinemia in MC4RKO obese mice to reach a reduced insulin/GH ratio. This was accompanied by the improvement in insulin sensitivity, metabolic flexibility, glucose tolerance, and decreased glucose fluctuation, together with appropriate modification of gene expression involved in substrate metabolism and adipose tissue browning. NMR measurement showed that TRF decreased fat mass but increased lean mass. Indirect calorimeter recording indicated that TRF decreased the respiratory exchange ratio (RER) reflecting consumption of more fatty acid in energy production in light phase and increased the oxygen consumption during activities in dark phase. <b><i>Conclusions:</i></b> TRF effectively decreases hyperinsulinemia and restores pulsatile GH secretion in the overeating obese mice with significant improvement in substrate and energy metabolism and body composition without reducing total caloric intake.
DOI: 10.4121/16912522.v1
title: Data and software supporting "Experimental demonstration of entanglement delivery using a quantum network stack"

description: Datasets and software to reproduce the results of the research.
DOI: 10.6084/m9.figshare.4075188.v2
title: Assembled database of wild-crop comparisons from Domestication impacts on plant-herbivore interactions: a meta-analysis

description: For millennia, humans have imposed strong selection on domesticated crops, resulting in drastically altered crop phenotypes compared with wild ancestors. Crop yields have increased, but a long-held hypothesis is that domestication has also unintentionally decreased plant defences against herbivores. To test this hypothesis, we conducted a phylogenetically controlled meta-analysis comparing insect herbivore resistance and putative plant defence traits between crops and their wild relatives. Our database included 2098 comparisons made across 73 crops in 89 studies. We found that domestication consistently reduced plant resistance to herbivores, although the magnitude of the effects varied across plant organs and depending on how resistance was measured. However, domestication had no consistent effects on the specific plant defence traits underlying resistance, including secondary metabolites and physical feeding barriers. The values of these traits sometimes increased and sometimes decreased during domestication. Consistent negative effects of domestication were observed only when defence traits were measured in reproductive organs or in the plant organ that was harvested. These results highlight the complexity of evolution under domestication and the need for an improved theoretical understanding of the mechanisms through which agronomic selection can influence the species interactions that impact both the yield and sustainability of our food systems.This article is part of the themed issue 'Human influences on evolution, and the ecological and societal consequences'.
DOI: 10.17632/2vnhh9s7xh
title: Central bank digital currency adoption dataset

description: Central bank digital currency adoption dataset
DOI: 10.6084/m9.figshare.7619378.v1
title: AstrangiaPoculata-Thermal-Performance

description: Electronic notebook for "Adaptive signatures in thermal performance of the temperate coral Astrangia poculata (Ellis & Solander, 1786)"
DOI: 10.6084/m9.figshare.18093830.v1
title: Supplementary Material for: Risk and Prognosis of Subsequent Primary Gastric Cancer

description: Introduction: The incidence and prognostic impact of subsequent primary gastric cancer (GC) in a population of other cancer survivors is unclear. We aimed to evaluate susceptibility to subsequent primary GC in cancer survivors and prognosis of GC with prior cancer history. Methods: 2,211 and 23,416 GC cases with and without prior cancer history were retrospectively selected from the Surveillance, Epidemiology and End Results (SEER) database. Potential risk of developing subsequent primary GC was assessed through standardized incidence ratios (SIRs). Cox regression were adopted to analyze the influence of prior cancer history and clinical characteristic factors on the prognosis of subsequent primary GC. A nomogram was established to predict overall survival (OS). Propensity score matching (PSM) was conducted to eliminate possible bias. Results: Compared with general population, cancer survivors had an increased risk of subsequent primary GC (SIR 1.17, 95% CI 1.15-1.20, P&lt;0.05). Prior cancer history was related to poor OS of GC [adjusted hazard ratio (aHR) 1.12, 95% CI 1.06-1.19, P&lt;0.001], but not cancer-specific survival (aHR 0.97, 95% CI 0.89-1.05, P=0.441). In addition, age, grade, stage, year of diagnosis, surgery, TNM stage and tumor size were independent prognostic factors for OS in GC cases with prior cancers. The concordance index of the nomogram was 0.72 (95% CI 0.71-0.74), and calibrate curves showed good agreement between prediction by the nomogram and actual observation. Conclusions: Cancer survivors with increased risk of developing subsequent primary GC should strengthen their monitoring and follow-up to prevent occurrence of subsequent primary gastric cancer.
DOI: 10.6084/m9.figshare.23290922.v1
title: S1_Table.

description: <strong>Patient characteristics and ART outcome</strong>
DOI: 10.17632/fjxf6dhztk
title: KAJIAN SUB DAERAH ALIRAN SUNGAI : Analisis Morfotektonik Bagi Pengelolaan Sumberdaya Dan Lingkungan Perairan

description: Pada 28 September 2018 terjadi bencana yang meluluhlantahkan Kota Palu dan sekitarnya. Daerah penelitian terletak di Sub DAS Kawatuna dan Sub DAS Sombe Lewara. Penelitian dilakukan untuk mengetahui zonasi tingkat aktivitas tektonik. Ekstraksi data diperoleh dari Citra DEMNAS. Analisis data meliputi analisis morfologi, analisis morfometri DAS dan analisis morfotektonik. Karakter Morfologi di daerah penelitian mengambarkan bentuk lahan dataran, perbukitan, pegunungan serta bentuk lembah berbentuk U dan V. Pola pengaliran yang berkembang adalah sub-dendritik, sub-parlalel dan rektangular. Karakter Morfometri DAS meliputi bentuk DAS berbentuk bulu burung, paralel dan radial. Nilai (Rb) pada orde 1 dan orde 4 sungai, menunjukkan telah mengalami perubahan akibat aktivitas tektonik. Nilai (D_d) adalah 2.91 – 3.40, menunjukan kategori sedang, merupakan alur sungai yang melewati batuan dengan resistensi yang lebih lunak, sehingga angkutan sedimen lebih besar. Indeks aktivitas tektonik (IAT) dari gabungan parameter morfotektonik (HI), (BS), (Smf), (Vf ratio), (AF) dan (SL), menujukkan kelas aktivitas tektonik terdiri dari dua (2) kelas yaitu kelas aktivitas tektonik tinggi dan kelas aktivitas tektonik menengah. Kelas aktivitas tektonik tinggi di Sub DAS Sombe Lewara dan kelas aktivitas tektonik menengah di Sub DAS Kawatuna. Akibat dari aktivitas tektonik tersebut, membentuk karakter bentang lahan kipas aluvial yang beragam. Di daerah Sub DAS Kawatuna kipas aluvial tersusun oleh endapan sedimen pasir halus sampai pasir sangat kasar dan endapan konglomerat dengan fragmen dominan granit, sekis, philit dan kuarsit. Sedangkan kipas aluvial di Sub DAS Sombe Lewara tersusun oleh endapan pasir kasar, pasir halus dan endapan konglomerat dengan bongkahan granit serta fragmen granit, serpih dan philit.
DOI: 10.6084/m9.figshare.25239697.v2
title: <b>Risk factors and bacterial spectrum postoperative infections after esophageal tumor surgery in patients with aged ≥60 years</b>

description: <b>Purpose</b> Patients after esophageal tumor surgery (ETS) are at increased risk of infectious complications and postoperative infections (PI) are also a common complication of ETS in the ≥60 years old.
DOI: 10.6084/m9.figshare.25037678.v1
title: research_data.xlsx

description: This is the dataset of assets and liabilities of 145 U.S. SLHCs (2013-2023).
DOI: 10.6084/m9.figshare.3412186.v1
title: Supplemental data for the capacitated vehicle routing problem with order available time

description: the details of all computational results of all algorithms for the capacitated vehicle routing problem with order available time.the details of all instances for the capacitated vehicle routing problem with order available time.