cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28270298
title: Table_S2.xlsx

description: Table S2. A) Results from the DE analysis of RBP levels between tumor/adenoma and matched adjacent mucosa. The results of the correlation analysis with the number of detected circRNAs in each sample are also reported. B) DE circRNA-binding motifs of correlated RBPs.
DOI: 10.6084/m9.figshare.28270301
title: Table_S3.xlsx

description: Table S3. A) Average score of MSigDB hallmark gene sets computed for lesions and adjacent colonic mucosa data. The log2FC computed based on the ratio of these scores is reported. B) Results of the correlation analysis between circRNA levels and levels of interacting RBP, miRNA, and analyzed pathways. C) List of interactions between DE circRNAs and RBP and miRNA as annotated in CircNet. D) Results of the differential expression analysis of miRNA levels between lesions and adjacent tissue samples. E) Results of the enrichment analysis of DE miRNA correlated with circRNA levels. F) Set of miRNA-target interactions. G) Set of ORFs predicted by circNet. The circRNAs whose presence of ORF is supported are indicated.
DOI: 10.6084/m9.figshare.28270301.v1
title: Table_S3.xlsx

description: Table S3. A) Average score of MSigDB hallmark gene sets computed for lesions and adjacent colonic mucosa data. The log2FC computed based on the ratio of these scores is reported. B) Results of the correlation analysis between circRNA levels and levels of interacting RBP, miRNA, and analyzed pathways. C) List of interactions between DE circRNAs and RBP and miRNA as annotated in CircNet. D) Results of the differential expression analysis of miRNA levels between lesions and adjacent tissue samples. E) Results of the enrichment analysis of DE miRNA correlated with circRNA levels. F) Set of miRNA-target interactions. G) Set of ORFs predicted by circNet. The circRNAs whose presence of ORF is supported are indicated.
DOI: 10.15468/dl.434jy6
title: Occurrence Download

description: A dataset containing 568 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Siphonaria capensis Quoy & Gaimard, 1833"
 ]
}

 The dataset includes 568 records from 45 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000658-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nqnusn
title: Occurrence Download

description: A dataset containing 1287 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is The occurrence status (present/absent) of the fish species associated with the ECOREEF, Discovery Bay, Jamaica (2015-2017)"
 ]
}

 The dataset includes 1287 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000656-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1285/i15910725v46p91
title: Serapias xmanfredoniae (S. apulica x S. cordigera) and Serapias xsipontensis (S. apulica x S. vomeracea), two new hybrids of the Gargano (North Apulia)

description: During an in-depth study on the different species of the gen. Serapias and their hybrids in Apulia, an inspection was carried out on a population of Serapias apulica present on the slopes of the Gargano Promontory (northern Apulia). During field observations on the population of the aforementioned species, in addition to the already known hybrid Serapias ×garganica (Serapias apulica × Serapias vomeracea var. longipetala; Baumann and Künkele, 1989), two other new hybrids were found which we named: Serapias ×manfredoniae (Serapias apulica × Serapias cordigera) and Serapias ×sipontensis (Serapias apulica × Serapias vomeracea). Serapias ×manfredoniae and Serapias ×sipontensis unmistakably recall, at a first observation in the field, many important characters of the parental S. apulica, mainly as regards the large and ventricular bracts, the large flowers and the dark red-purple colour of the flower spike; other important elements of affinity and discrimination emerged in the preparation of the samples: shape and size of the sepals, shape and size of the petals, extension and shapes of the various parts of the labellum, colour of the pollen masses; what was acquired allowed us to determine with good approximation the identification factors of the two new hybrids. Serapias ×manfredoniae also reminds the parental S. apulica due to the general robust appearance of the plant; the light pigmentation of the tepal hood; the whitish hairiness of the labellum; it shows ancestry from S. cordigera due to the reniform lateral lobes widely overlapping the epichyle; the shape and width of the epichile; the medium-sized ovary and other elements; between the parents mainly the shape and size of the sepals, the size of the base of the petals and their total length are intermediate. Serapias ×sipontensis reminds S. apulica also for the following characteristics: a medium-stocky tepal hood with purple-dark longitudinal veins; narrow, extended and thread-like apex of the petals with the general dark purple-brown colour; the green ovary with slight purple hues, in addition to the numerous elements mentioned above (large and broad ventricular bract, large flowers, dark red-purple colour of the flower spike); instead, it recalls S. vomeracea for these reasons: the reduced size of the labellum; the narrow epichile; the lamellae of the basal callus are on average robust, spaced and sub-parallel, to form a gutter longer than wider; the purple-brown colour marked on the pollen bags; the shape and size of the sepals and the size of the base of the petals and their total length are mainly intermediate between the parents.
DOI: 10.15468/dl.9vemba
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Carex splendentissima U.Kang & J.Chung"
 ]
}

 The dataset includes 5 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000657-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fxfw89
title: Occurrence Download

description: A dataset containing 586 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-125 -58,-15 -58,-15 15,-125 15,-125 -58))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Fitzroya cupressoides (Molina) I.M.Johnst."
 ]
}

 The dataset includes 586 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000659-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28270295
title: Table_S1.xlsx

description: Table S1. A) Annotations of the circRNAs analyzed in this study:in the table are included circRNAs genomic coordinates and host gene names, details on their levels in the four main sample classes analyzed, and results from the DESeq2 analysis. B) Details on the Differentially Expressed (DE) circRNAs identified, including the results from the DESeq2 analysis. C) Overlap with Zhao et al., 2023, COLOBIOME cohort data, Garcia-Rodriguez at al., 2023 and Li et al., 2024. D) Single-cell data analysis of host-genes and RBPs involved in circRNA biogenesis.
DOI: 10.6084/m9.figshare.28270295.v1
title: Table_S1.xlsx

description: Table S1. A) Annotations of the circRNAs analyzed in this study:in the table are included circRNAs genomic coordinates and host gene names, details on their levels in the four main sample classes analyzed, and results from the DESeq2 analysis. B) Details on the Differentially Expressed (DE) circRNAs identified, including the results from the DESeq2 analysis. C) Overlap with Zhao et al., 2023, COLOBIOME cohort data, Garcia-Rodriguez at al., 2023 and Li et al., 2024. D) Single-cell data analysis of host-genes and RBPs involved in circRNA biogenesis.
DOI: 10.1285/i15910725v46p113
title: Elements of Pelagos Biology. With Focus on the Mediterranean Sea
DOI: 10.15468/dl.3uesb6
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Birds occurring at Namitete farm, Mchinji"
 ]
}

 The dataset includes 51 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000661-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gauprb
title: Occurrence Download

description: A dataset containing 266 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((88.15598 62.17836,76.18659 57.97739,74.90445 54.47696,76.67502 51.22074,77.91645 49.57228,81.83946 47.92039,89.51722 44.96151,93.91952 47.2458,96.29797 52.87899,88.15598 62.17836))",
 "HasGeospatialIssue is false",
 "Month is one of (January, February, December, November)",
 "TaxonKey is Buteo hemilasius Temminck & Schlegel, 1844"
 ]
}

 The dataset includes 266 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000660-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1285/i15910725v46p119
title: Blu Salento. Guida alle coste e alle immersioni
DOI: 10.15468/dl.m4ansf
title: Occurrence Download

description: A dataset containing 634257 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Inventario Español de Especies Terrestres (MAGRAMA)"
 ]
}

 The dataset includes 634257 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000630-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.1285/i15910725v46p123
title: Indice
DOI: 10.21227/m7ex-ke07
title: Image dataset for supervised learning based colonoscopy navigation systems

description: The dataset aims to train a motorized colonoscopy system using supervised learning approaches. It includes twelve experimental scenarios (sequences). The experiments, specifically colonoscopies, were performed using a phantom colon, which is widely utilized in gastroenterology. Each image in the sequences was obtained during the colonoscope’s traveled from the rectum to the cecum. The labeled dataset consists of target steering points (along the x- and y-axes) and collision data (represented as a binary classification: 0 or 1). Note that all raw data is in .jpg format, while the labeling data is in .csv format.
DOI: 10.15468/dl.ssn3hf
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "OccurrenceStatus is Present",
 "TaxonKey is Radix auricularia (Linnaeus, 1758)"
 ]
}

 The dataset includes 8 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000664-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9th5sk
title: Occurrence Download

description: A dataset containing 9717 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is RECORD Chiroptera Data"
 ]
}

 The dataset includes 9717 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000663-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jtsmw7
title: Occurrence Download

description: A dataset containing 2458 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "Country is United States of America",
 "TaxonKey is Chiroptera",
 "Year 2010-2022"
 ]
}

 The dataset includes 2458 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000665-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.sexc2f
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Bolborhinum tubericeps (Fairmaire, 1856)"
 ]
}

 The dataset includes 20 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000666-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.76dude
title: Occurrence Download

description: A dataset listing the 1180 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Impact of rainforest transformation on phylogenetic and functional diversity of soil prokaryotic communities in Sumatra (Indonesia)"
 ]
}

 The dataset's 1180 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000641-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57754/fdat.yskf9-z7718
title: Papiamento: Father and son

description: The audio files contain descriptions in Papiamento of the following three picture stories of E. O. Plauen (series "Vater und Sohn"):
                       1. "Rauchringe"
                       2. "Missglückte Herausforderung"
                       3. "Der Schmöker"
There is no transcription available.
description: Research carried out in work package C07 of the SFB 833.
DOI: 10.15468/dl.zhsx59
title: Occurrence Download

description: A dataset listing the 36 species recorded in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trichostomum crispulum Bruch"
 ]
}

 The dataset's 36 records were derived from 292 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000643-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.fasi30zo
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (335 records)
DOI: 10.5281/zenodo.14732008
title: Expectancies and Motives as Predictors of Risky Alcohol Consumption in College Women
DOI: 10.5281/zenodo.14732009
title: Expectancies and Motives as Predictors of Risky Alcohol Consumption in College Women
DOI: 10.15468/dl.qydy38
title: Occurrence Download

description: A dataset listing the 10633 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is EOD – eBird Observation Dataset"
 ]
}

 The dataset's 10633 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000629-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yvheb4
title: Occurrence Download

description: A dataset containing 5517 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "GadmGid is COL.15.32_2"
 ]
}

 The dataset includes 5517 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000667-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57754/fdat.z9sky-2v876
title: Verbal aspectuality follow-up SUM

description: This data set comprises adjusted data from a rating study in which participants read single sentences on the screen and rate their acceptability on a scale from 1-7.
Acceptability judgement study on verbal aspectuality in Romances languages and Romance-based creole languages (ongoing).
description: Research carried out in work package C07 of the SFB 833.
DOI: 10.15468/dl.cmggjg
title: Occurrence Download

description: A dataset containing 300 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Bats of Sarawak, Malaysia Borneo"
 ]
}

 The dataset includes 300 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000669-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57754/fdat.6a5kn-7jg31
title: Verbal aspectuality follow-up 2020-2021.

description: This data set comprises raw data from a rating study in which participants read single sentences on the screen and rate their acceptability on a scale from 1-7.
Follow-up acceptability judgement study on verbal aspectuality in Brazilian Portuguese (2020).
DOI: 10.15468/dl.hhh82u
title: Occurrence Download

description: A dataset containing 12327 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is India",
 "DatasetKey is one of (EOD – eBird Observation Dataset, Birda - Global Observation Dataset, iNaturalist Research-grade Observations, India Biodiversity Portal publication grade dataset)",
 "GadmGid is IND.16.28_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pavo cristatus Linnaeus, 1758",
 "Year 1990-2024"
 ]
}

 The dataset includes 12327 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000670-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14732146
title: House soiling in Italian Cats
DOI: 10.5281/zenodo.14732147
title: House soiling in Italian Cats
DOI: 10.15468/dl.fbubsn
title: Occurrence Download

description: A dataset containing 27322 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "GadmGid is COL.15.57_2"
 ]
}

 The dataset includes 27322 records from 116 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000672-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.24urh8
title: Occurrence Download

description: A dataset containing 12160 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Trichostomum crispulum Bruch"
 ]
}

 The dataset includes 12160 records from 291 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000671-250123221155621/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7uap65
title: Occurrence Download

description: A dataset containing 193158 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tracheophyta",
 "DecimalLatitude is greater than or equal to -20.914722",
 "DecimalLatitude is less than or equal to -15.914722",
 "DecimalLongitude is greater than or equal to -65.0",
 "DecimalLongitude is less than or equal to -60.0",
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE"
 ]
}

 The dataset includes 193158 records from 235 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063605-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18028488
title: Data for "Separating Signal from Noise in Large-Domain Hydrologic Model Evaluation: Benchmarking model performance under sampling uncertainty"

description: Data and code that create the figures in "Separating Signal from Noise in Large-Domain Hydrologic Model Evaluation: Benchmarking model performance under sampling uncertainty", at the time of initial submission.

To use:



Ensure a Python environment with at least: geopandas, jupyterlab, pandas, matplotlib, numpy

Download and extract the "Data" and "Scripts" files

Ensure a new folder "Plot" exists at the same level as "Data" and "Scripts"

Execute notebooks


See notebook P4 for specific instructions on obtaining administrative boundaries.
DOI: 10.5281/zenodo.18028487
title: Data for "Separating Signal from Noise in Large-Domain Hydrologic Model Evaluation: Benchmarking model performance under sampling uncertainty"

description: Data and code that create the figures in "Separating Signal from Noise in Large-Domain Hydrologic Model Evaluation: Benchmarking model performance under sampling uncertainty", at the time of initial submission.

To use:



Ensure a Python environment with at least: geopandas, jupyterlab, pandas, matplotlib, numpy

Download and extract the "Data" and "Scripts" files

Ensure a new folder "Plot" exists at the same level as "Data" and "Scripts"

Execute notebooks


See notebook P4 for specific instructions on obtaining administrative boundaries.
DOI: 10.48437/bcf493-86393b
title: Hydraulische Untersuchungen Donau, km 2321–2249, 2021
DOI: 10.34740/kaggle/dsv/14264202
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.48437/761783-24b25f
title: Hydraulische Untersuchungen Donau, km 2285-2256, 2020
DOI: 10.5281/zenodo.17911247
title: MitoNGS: supplementary data
DOI: 10.5281/zenodo.17911248
title: MitoNGS: supplementary data
DOI: 10.48437/62eeab-3c18f0
title: Hydraulische Untersuchungen Donau, km 2321–2249, 2023
DOI: 10.5281/zenodo.18028959
title: METHODS OF SCIENTIFIC KNOWLEDGE IN THE EPISTEMOLOGICAL HERITAGE OF FRANCIS BACON
DOI: 10.5281/zenodo.18028960
title: METHODS OF SCIENTIFIC KNOWLEDGE IN THE EPISTEMOLOGICAL HERITAGE OF FRANCIS BACON
DOI: 10.48437/d21c1c-02b034
title: Hydraulische Untersuchungen Donau, km 2321-2249, 2024
DOI: 10.48437/4ba06c-96b2b0
title: Hydraulische Untersuchungen Donau, km 2321–2249, 2019
DOI: 10.15468/dl.xpgp9m
title: Occurrence Download

description: A dataset containing 766946 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GenusKey is Verbascum",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
}

 The dataset includes 766946 records from 2971 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0063604-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/2hy-d2e-yb2
title: Hieracium sabaudum L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/36b-rq6-rc7
title: Klasea boetica (Boiss. ex DC.) Holub

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/el1-8fg-n9d
title: Potentilla argentea L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/1k8-sde-vnk
title: Pedicularis pyrenaica J. Gay

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/h7h-251-hhb
title: Hieracium L.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/jz4-dgv-tk3
title: Genista jimenezii Pau ex Munuera

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/1m9-y4v-khf
title: Spergularia rubra (L.) J. Presl & C. Presl

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/cha-a8m-6y6
title: Hieracium mixtum Froel.

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.
DOI: 10.3535/dgv-6h0-2j7
title: Iberis grossii Pau

description: Digital Specimen for the physical specimen hosted at Natural History Museum Vienna.