cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh1196352.10fu
title: SH1196352.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1196354.10fu
title: SH1196354.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1196360.10fu
title: SH1196360.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1196364.10fu
title: SH1196364.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1196365.10fu
title: SH1196365.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1196366.10fu
title: SH1196366.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1196368.10fu
title: SH1196368.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.3886/e239334
title: Video-Based 3D pose estimation for residential roofing-dataset

description: To protect residential roofing construction workers from both fatal and musculoskeletal injuries, it is necessary to assess the musculoskeletal and biomechanical risks in residential roofing tasks. This undertaking requires accurate information of workers’ 3D body positions to analyze kinematics and kinetics of the human body. In this study, we proposed a novel 2- stage motion estimation approach based on a convolution neural network to estimate residential roofer’s body positions using three-view video data. Instead of pursuing end-to- end training, our approach includes two stages: (1) use a multi-view model to estimate the 3D pose in a single frame; (2) use a multi-frame model to apply temporal convolutions to refine the multi-view outputs. The performance of the approach was evaluated by comparing our estimation with the gold-standard marker-based 3D human pose estimation (“ground truth”). The evaluation results show that our marker-free video-based approach can accurately capture the 3D posture of workers during the common roofing task and the proposed multi-frame model can effectively improve the precision of the coordinate sequence. The values of mean per joint position error of estimated human position before and after processing by the multi-frame model are 27.93 and 24.81 mm, respectively. These results prove that the proposed marker-free motion capture estimation approach can efficiently and accurately locate 3D body joints and pave the way for future onsite musculoskeletal motion analysis during roofing activities.
description: Data downloaded 5/20/2025
DOI: 10.3886/e239334v1
title: Video-Based 3D pose estimation for residential roofing-dataset

description: To protect residential roofing construction workers from both fatal and musculoskeletal injuries, it is necessary to assess the musculoskeletal and biomechanical risks in residential roofing tasks. This undertaking requires accurate information of workers’ 3D body positions to analyze kinematics and kinetics of the human body. In this study, we proposed a novel 2- stage motion estimation approach based on a convolution neural network to estimate residential roofer’s body positions using three-view video data. Instead of pursuing end-to- end training, our approach includes two stages: (1) use a multi-view model to estimate the 3D pose in a single frame; (2) use a multi-frame model to apply temporal convolutions to refine the multi-view outputs. The performance of the approach was evaluated by comparing our estimation with the gold-standard marker-based 3D human pose estimation (“ground truth”). The evaluation results show that our marker-free video-based approach can accurately capture the 3D posture of workers during the common roofing task and the proposed multi-frame model can effectively improve the precision of the coordinate sequence. The values of mean per joint position error of estimated human position before and after processing by the multi-frame model are 27.93 and 24.81 mm, respectively. These results prove that the proposed marker-free motion capture estimation approach can efficiently and accurately locate 3D body joints and pave the way for future onsite musculoskeletal motion analysis during roofing activities.
description: Data downloaded 5/20/2025
DOI: 10.6084/m9.figshare.29923244
title: <b>AoVp</b>

description: The Art of Virtuosity performance from the Music-in-Medicine program.
DOI: 10.6084/m9.figshare.29923244.v1
title: <b>AoVp</b>

description: The Art of Virtuosity performance from the Music-in-Medicine program.
DOI: 10.6084/m9.figshare.29923244.v2
title: <b>AoVp</b>

description: The Art of Virtuosity performance from the Music-in-Medicine program.
DOI: 10.3886/e239333
title: Exposure to the antimicrobial chemical triclosan disrupts keratinocyte function and skin integrity in a model of reconstructed human epidermis

description: Triclosan is an antimicrobial chemical incorporated into products that are applied to the skin of healthcare workers. Exposure to triclosan has previously been shown to be immunomodulatory and associated with allergic disease. Additionally, we have shown that exposure to triclosan dermally activates the NLRP3 inflammasome and disrupts the skin barrier integrity in mice. The skin is the largest organ in the body and plays an important role as a physical barrier and regulator of the immune system. Alterations in the barrier and immune regulatory functions of the skin have been demonstrated to increase the risk of sensitization and development of allergic disease. In this study, the impact of triclosan exposure on the skin barrier and keratinocyte function was investigated using a model of reconstructed human epidermis. The apical surface of reconstructed human epidermis was exposed to triclosan once for 6, 24, or 48 hours or daily for 5 consecutive days.
description: Data downloaded on 5/20/2025
DOI: 10.3886/e239333v1
title: Exposure to the antimicrobial chemical triclosan disrupts keratinocyte function and skin integrity in a model of reconstructed human epidermis

description: Triclosan is an antimicrobial chemical incorporated into products that are applied to the skin of healthcare workers. Exposure to triclosan has previously been shown to be immunomodulatory and associated with allergic disease. Additionally, we have shown that exposure to triclosan dermally activates the NLRP3 inflammasome and disrupts the skin barrier integrity in mice. The skin is the largest organ in the body and plays an important role as a physical barrier and regulator of the immune system. Alterations in the barrier and immune regulatory functions of the skin have been demonstrated to increase the risk of sensitization and development of allergic disease. In this study, the impact of triclosan exposure on the skin barrier and keratinocyte function was investigated using a model of reconstructed human epidermis. The apical surface of reconstructed human epidermis was exposed to triclosan once for 6, 24, or 48 hours or daily for 5 consecutive days.
description: Data downloaded on 5/20/2025
DOI: 10.3886/e239326
title: High-fat western diet consumption exacerbates silica-induced pulmonary inflammation and fibrosis

description: Adipose tissue (AT), an endocrine organ, plays a central role in maintenance of whole-body energy homeostasis through its release of adipokines. Obesity, affecting over 40% of American adults, disrupts adipocyte metabolism leading to chronic systemic inflammation and metabolic dysfunction (MetDys). MetDys is associated with impaired lung function, pulmonary hypertension, and asthma. The aim of this study was to investigate the effects of high-fat Western diet (HFWD)-consumption on silica-induced pulmonary inflammation and fibrosis in the F344 rat.
DOI: 10.3886/e239326v1
title: High-fat western diet consumption exacerbates silica-induced pulmonary inflammation and fibrosis

description: Adipose tissue (AT), an endocrine organ, plays a central role in maintenance of whole-body energy homeostasis through its release of adipokines. Obesity, affecting over 40% of American adults, disrupts adipocyte metabolism leading to chronic systemic inflammation and metabolic dysfunction (MetDys). MetDys is associated with impaired lung function, pulmonary hypertension, and asthma. The aim of this study was to investigate the effects of high-fat Western diet (HFWD)-consumption on silica-induced pulmonary inflammation and fibrosis in the F344 rat.
DOI: 10.6084/m9.figshare.30472025
title: NCAA Division I Volleyball Match Data, 2025 Season

description: Dataset contains game level data from the 2025 NCAA Division 1 men's volleyball season. Each row represents one game with match outcomes coded as win or loss, measured against 19 performance variables including kills, errors, assists, service aces, and other key performance indicators.
DOI: 10.6084/m9.figshare.30472025.v1
title: NCAA Division I Volleyball Match Data, 2025 Season

description: Dataset contains game level data from the 2025 NCAA Division 1 men's volleyball season. Each row represents one game with match outcomes coded as win or loss, measured against 19 performance variables including kills, errors, assists, service aces, and other key performance indicators.
DOI: 10.5281/zenodo.17467083
title: Data for the paper "Genetic interfaces at the frontier of expanding microbial colonies"

description: Data necessary for generating the figures in the paper: "Genetic interfaces at the frontier of expanding microbial colonies"

(https://arxiv.org/abs/2510.23307)
DOI: 10.5281/zenodo.17467084
title: Data for the paper "Genetic interfaces at the frontier of expanding microbial colonies"

description: Data necessary for generating the figures in the paper: "Genetic interfaces at the frontier of expanding microbial colonies"

(https://arxiv.org/abs/2510.23307)
DOI: 10.3886/e239341
title: Evaluation of Propylene Glycol Methyl Ether as a Potential Challenge Agent for Leak Detection of Liquid and Headspace from Closed System Drug Transfer Devices using Fourier Transform Infrared Spectroscopy

description: Measurement of vapors from solutions containing propylene glycol methyl 
ether (PGME) released inside a closed chamber were evaluated. Data used 
to quantify limits of detection, limits of quantification, bias, 
precision, and accuracy of Fourier Transform Infrared Spectroscopy 
(FTIR) measurements of vapors from 2.5 M PGME solutions are presented. 
The effects of ethanol as a component of the PGME solution were also 
evaluated. Liquid drops of PGME solutions and headspace vapors above 
PGME solutions were released to simulate leaks from Closed System 
Drug-Transfer Devices (CSTD)s. Using a calibration apparatus, an 
instrumental LOD of 0.25 ppmv and a LOQ of 0.8 ppmv were determined for 
PGME vapor. A LOD of 1.1 µL and a LOQ of 3.5 µL was determined for 
liquid aliquots of 2.5 M PGME solution released in the NIOSH chamber. 
Accurate quantitation of liquid leaks required complete evaporation of 
droplets. With the upper end of the usable quantitation range limited by
 slow evaporation of relatively large droplets and the lower end defined
 by the method LOQ, the method has a narrow quantitative range for 
liquid droplets. Displacement of 45 mL of vial headspace containing PGME
 vapor is the largest amount expected when using the draft NIOSH testing
 protocol. Release of an unfiltered 45 mL headspace aliquot within the 
NIOSH chamber was calculated to produce a concentration of 0.8 ppmv 
based on the Henry’s constant, which is right at the instrumental LOQ. 
Therefore, the sensitivity of the method was not adequate to determine 
leaks of PGME vapor from a headspace release through an air filtering 
CSTD when using the draft NIOSH testing protocols with an FTIR analyzer.<br>
description: Data downloaded 5/20/2025
DOI: 10.3886/e239341v1
title: Evaluation of Propylene Glycol Methyl Ether as a Potential Challenge Agent for Leak Detection of Liquid and Headspace from Closed System Drug Transfer Devices using Fourier Transform Infrared Spectroscopy

description: Measurement of vapors from solutions containing propylene glycol methyl 
ether (PGME) released inside a closed chamber were evaluated. Data used 
to quantify limits of detection, limits of quantification, bias, 
precision, and accuracy of Fourier Transform Infrared Spectroscopy 
(FTIR) measurements of vapors from 2.5 M PGME solutions are presented. 
The effects of ethanol as a component of the PGME solution were also 
evaluated. Liquid drops of PGME solutions and headspace vapors above 
PGME solutions were released to simulate leaks from Closed System 
Drug-Transfer Devices (CSTD)s. Using a calibration apparatus, an 
instrumental LOD of 0.25 ppmv and a LOQ of 0.8 ppmv were determined for 
PGME vapor. A LOD of 1.1 µL and a LOQ of 3.5 µL was determined for 
liquid aliquots of 2.5 M PGME solution released in the NIOSH chamber. 
Accurate quantitation of liquid leaks required complete evaporation of 
droplets. With the upper end of the usable quantitation range limited by
 slow evaporation of relatively large droplets and the lower end defined
 by the method LOQ, the method has a narrow quantitative range for 
liquid droplets. Displacement of 45 mL of vial headspace containing PGME
 vapor is the largest amount expected when using the draft NIOSH testing
 protocol. Release of an unfiltered 45 mL headspace aliquot within the 
NIOSH chamber was calculated to produce a concentration of 0.8 ppmv 
based on the Henry’s constant, which is right at the instrumental LOQ. 
Therefore, the sensitivity of the method was not adequate to determine 
leaks of PGME vapor from a headspace release through an air filtering 
CSTD when using the draft NIOSH testing protocols with an FTIR analyzer.<br>
description: Data downloaded 5/20/2025
DOI: 10.3886/e239338
title: Effects of E-Cigarette Flavoring Chemicals on Human Macrophages and Bronchial Epithelial Cells

description: E-cigarettes utilize a wide range of flavoring chemicals whose respiratory health effects are not well understood. In this study, we used pulmonary-associated cell lines to assess the in vitro cytotoxic effects of thirty flavoring chemicals. Human bronchial epithelial cells (BEAS-2B) and both naïve and activated macrophages (THP-1) were treated with 10, 100, and 1000 µM of flavoring chemicals and analyzed for changes in viability, cell membrane damage, reactive oxygen species (ROS) production, and inflammatory cytokine release. Viability was most greatly affected by decanal, hexanal, nonanal, cinnamaldehyde, eugenol, vanillin, alpha-pinene, eugenol, and limonene. High amounts of ROS were elicited by vanillin, ethyl maltol, and the diketones (2,3-pentanedione, 2,3-heptanedione, and 2,3-hexanedione) from both cell lines. Naïve THP-1 cells produced significant levels of IL-1β, IL-8, and TNF-α when exposed to ethyl maltol and hexanal. Activated THP-1 cells released increased IL-1β and TNF-α when exposed to ethyl maltol, but many flavoring chemicals had an apparent suppressive effect on inflammatory cytokines released by activated macrophages, with varying degrees of accompanying cytotoxicity. The diketones, L-carvone, and linalool, suppressed cytokine release in the absence of cytotoxicity. These findings provide insight into patterns of cytotoxicity and inflammatory cytokine release potentially relevant to the development of pathological changes in the lungs of e-cigarette users.
description: Downloaded 5/20/2025
DOI: 10.3886/e239338v1
title: Effects of E-Cigarette Flavoring Chemicals on Human Macrophages and Bronchial Epithelial Cells

description: E-cigarettes utilize a wide range of flavoring chemicals whose respiratory health effects are not well understood. In this study, we used pulmonary-associated cell lines to assess the in vitro cytotoxic effects of thirty flavoring chemicals. Human bronchial epithelial cells (BEAS-2B) and both naïve and activated macrophages (THP-1) were treated with 10, 100, and 1000 µM of flavoring chemicals and analyzed for changes in viability, cell membrane damage, reactive oxygen species (ROS) production, and inflammatory cytokine release. Viability was most greatly affected by decanal, hexanal, nonanal, cinnamaldehyde, eugenol, vanillin, alpha-pinene, eugenol, and limonene. High amounts of ROS were elicited by vanillin, ethyl maltol, and the diketones (2,3-pentanedione, 2,3-heptanedione, and 2,3-hexanedione) from both cell lines. Naïve THP-1 cells produced significant levels of IL-1β, IL-8, and TNF-α when exposed to ethyl maltol and hexanal. Activated THP-1 cells released increased IL-1β and TNF-α when exposed to ethyl maltol, but many flavoring chemicals had an apparent suppressive effect on inflammatory cytokines released by activated macrophages, with varying degrees of accompanying cytotoxicity. The diketones, L-carvone, and linalool, suppressed cytokine release in the absence of cytotoxicity. These findings provide insight into patterns of cytotoxicity and inflammatory cytokine release potentially relevant to the development of pathological changes in the lungs of e-cigarette users.
description: Downloaded 5/20/2025