cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0213538.10fu
title: SH0213538.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.3qzbdh
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (China, Chinese Taipei, Japan)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Dendrobium officinale Kimura & Migo"
 ]
}

 The dataset includes 78 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0059901-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6nvrtm
title: Occurrence Download

description: A dataset containing 320888 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 {
 "or" : [
 "TaxonKey is Apotrigona Moure, 1961",
 "TaxonKey is Austroplebeia Moure, 1961",
 "TaxonKey is Melipona Illiger, 1806",
 "TaxonKey is Meliponorytes Tosi, 1896",
 "TaxonKey is Meliponula Cockerell, 1934",
 "TaxonKey is Meliwillea Roubik, Lobo Segura & Camargo, 1997",
 "TaxonKey is Mourella Schwarz, 1946",
 "TaxonKey is Nannotrigona Cockerell, 1922",
 "TaxonKey is Nogueirapis Moure, 1953",
 "TaxonKey is Oxytrigona Cockerell, 1917",
 "TaxonKey is Paratrigona Schwarz, 1938",
 "TaxonKey is Paratrigonoides Camargo & Roubik, 2005",
 "TaxonKey is Partamona Schwarz, 1939",
 "TaxonKey is Pariotrigona Moure, 1961",
 "TaxonKey is Plebeia Schwarz, 1938",
 "TaxonKey is Plebeina Moure, 1961",
 "TaxonKey is Proplebeia Michener, 1982",
 "TaxonKey is Ptilotrigona Moure, 1951",
 "TaxonKey is Axestotrigona Moure, 1961",
 "TaxonKey is Camargoia Moure, 1989",
 "TaxonKey is Cephalotrigona Schwarz, 1940",
 "TaxonKey is Cleptotrigona Moure, 1961",
 "TaxonKey is Dactylurina Cockerell, 1934",
 "TaxonKey is Dolichotrigona Moure, 1950",
 "TaxonKey is Duckeola Moure, 1944",
 "TaxonKey is Exebotrigona Engel & Michener, 2013",
 "TaxonKey is Friesella Moure, 1946",
 "TaxonKey is Frieseomelitta Ihering, 1912",
 "TaxonKey is Geniotrigona Moure, 1961",
 "TaxonKey is Geotrigona Moure, 1943",
 "TaxonKey is Heterotrigona Schwarz, 1939",
 "TaxonKey is Homotrigona Moure, 1961",
 "TaxonKey is Hypotrigona Cockerell, 1934",
 "TaxonKey is Lepidotrigona Schwarz, 1939",
 "TaxonKey is Lestrimelitta Friese, 1903",
 "TaxonKey is Leurotrigona Moure, 1950",
 "TaxonKey is Liotrigona Moure, 1961",
 "TaxonKey is Liotrigonopsis Engel, 2001",
 "TaxonKey is Meliplebeia Moure, 1961",
 "TaxonKey is Scaptotrigona Moure, 1942",
 "TaxonKey is Scaura Schwarz, 1938",
 "TaxonKey is Schwarziana Moure, 1943",
 "TaxonKey is Tetragona Lepeletier & Audinet-Serville, 1828",
 "TaxonKey is Tetragonisca Moure, 1946",
 "TaxonKey is Tetragonula Moure, 1961",
 "TaxonKey is Trichotrigona Camargo & Moure, 1983",
 "TaxonKey is Trigona Jurine, 1807",
 "TaxonKey is Trigonisca Moure, 1950",
 "TaxonKey is Wallacetrigona Engel & Rasmussen, 2017"
 ]
 }
 ]
}

 The dataset includes 320888 records from 149 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027146-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.11362379
title: Applying short text topic models to instant messaging communication of software developers

description: Content related to paper "Applying short text topic models to instant messaging communication of software developers" published in the Journal of Systems and Software.

Data available:



Data sets used: JSONs with messages from Gitter chat rooms (downloaded with previous Gitter API - https://developer.gitter.im/docs/welcome):



"Android.json"

"ConsenSys.json"

"WebpackDocs.json"

"Jenkinsci.json"

"Locomotive.json"

"SpringSecurity.json"

"Flutter.rar" - json file was compressed due to its size

"GitterHQ.rar" - json file was compressed due to its size

"Laravel.rar" - json file was compressed due to its size



"stopwords_list": Customized list of stop words

"topics_sttm_results.csv": Topics obtained with each combination of model and corpus (both lemmatized and stemmed corpora)

"intrusion_tasks.csv": Results of the survey for the Intrusion Tasks and its participants' background

"topicnaming_tasks.csv": Results of the survey for the Topic Naming Tasks and its participants' background

"intrinsic_metrics.csv": Scores of topic coherence metrics at topic level ('average' represents the score at model level)

"topics_themes_chatrooms.csv": Results of the exercise described in Section 5.2 with the topics and themes identified in each of the 87 Gitter chat rooms.

"sensitivity_analysis": Results of a smaller-scale sensitivity analysis to check the impact of the number of topics on the main findings of the paper.
DOI: 10.5281/zenodo.11362380
title: Applying short text topic models to instant messaging communication of software developers

description: Content related to paper "Applying short text topic models to instant messaging communication of software developers" published in the Journal of Systems and Software.

Data available:



Data sets used: JSONs with messages from Gitter chat rooms (downloaded with previous Gitter API - https://developer.gitter.im/docs/welcome):



"Android.json"

"ConsenSys.json"

"WebpackDocs.json"

"Jenkinsci.json"

"Locomotive.json"

"SpringSecurity.json"

"Flutter.rar" - json file was compressed due to its size

"GitterHQ.rar" - json file was compressed due to its size

"Laravel.rar" - json file was compressed due to its size



"stopwords_list": Customized list of stop words

"topics_sttm_results.csv": Topics obtained with each combination of model and corpus (both lemmatized and stemmed corpora)

"intrusion_tasks.csv": Results of the survey for the Intrusion Tasks and its participants' background

"topicnaming_tasks.csv": Results of the survey for the Topic Naming Tasks and its participants' background

"intrinsic_metrics.csv": Scores of topic coherence metrics at topic level ('average' represents the score at model level)

"topics_themes_chatrooms.csv": Results of the exercise described in Section 5.2 with the topics and themes identified in each of the 87 Gitter chat rooms.

"sensitivity_analysis": Results of a smaller-scale sensitivity analysis to check the impact of the number of topics on the main findings of the paper.
DOI: 10.15468/dl.w2guwf
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON ((-86.2636385999999931 43.1940969999999993, -86.2636385999999931 43.1947845799999968, -86.2636385999999931 43.1957300099999983, -86.2636385999999931 43.1965894900000009, -86.2636385999999931 43.1972770799999992, -86.2636385999999931 43.1978787199999985, -86.2636385999999931 43.1989100899999983, -86.2636385999999931 43.1997265999999982, -86.2636385999999931 43.2003712100000001, -86.2636385999999931 43.2011447399999966, -86.2636385999999931 43.2016604299999969, -86.2636385999999931 43.2023909899999978, -86.2636385999999931 43.2029926299999971, -86.2636385999999931 43.2037231899999981, -86.2636385999999931 43.2045396899999972, -86.2636385999999931 43.2053561999999971, -86.2629508600000037 43.2053561999999971, -86.2614894000000021 43.2053561999999971, -86.2605867399999937 43.2053561999999971, -86.2593401999999969 43.2053561999999971, -86.2593401999999969 43.2042818500000010, -86.2593401999999969 43.2036802100000017, -86.2593401999999969 43.2028637100000026, -86.2593401999999969 43.2023050399999988, -86.2593401999999969 43.2013596099999972, -86.2593401999999969 43.2008439299999978, -86.2593401999999969 43.2000703900000005, -86.2593401999999969 43.1989530700000017, -86.2593401999999969 43.1980935899999992, -86.2593401999999969 43.1972341099999966, -86.2593401999999969 43.1966754399999999, -86.2593401999999969 43.1959019100000035, -86.2593401999999969 43.1947845799999968, -86.2593401999999969 43.1940969999999993, -86.2606297199999972 43.1940969999999993, -86.2614464199999986 43.1940969999999993, -86.2625639999999976 43.1940969999999993, -86.2636385999999931 43.1940969999999993))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1932",
 "BasisOfRecord is one of (Human Observation, Living Specimen, Observation, Specimen, Machine Observation)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0151789-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7nyc3e
title: Occurrence Download

description: A dataset containing 1359 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Chaerephon jobensis (Miller, 1902)"
 ]
}

 The dataset includes 1359 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0086457-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vsfnbb
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 {
 "and" : [
 "GadmGid is one of (COL.14_1, COL.6_1)",
 "TaxonKey is one of (Anas georgica J.F.Gmelin, 1789, Anas georgica georgica, Anas georgica niceforoi Wetmore & Borrero, 1946)"
 ]
 }
 ]
}

 The dataset includes 10 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0180330-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4qf3hc
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dendrobium farinatum Schildh. & Schraut"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016935-240314170635999/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s2acyd
title: Occurrence Download

description: A dataset containing 114753 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Juncus tenuis Willd."
 ]
}

 The dataset includes 114753 records from 691 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0264317-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qj3n5e
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Lepidopilum caudicaule Müll.Hal."
 ]
}

 The dataset includes 8 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0415335-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3pbqx2
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Synalpheus gracilirostris De Man, 1910"
 ]
}

 The dataset includes 98 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0133246-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.atpgqu
title: Occurrence Download

description: A dataset containing 593624 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Apis mellifera Linnaeus, 1758"
 ]
}

 The dataset includes 593624 records from 1013 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0169254-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25574/29711
title: Chandra X-ray Observatory ObsId 29711

description: Time-resolved protoplanetary disk physics in DQ Tau
DOI: 10.15468/dl.vvfbhx
title: Occurrence Download

description: A dataset containing 754486 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Estonia",
 "GadmGid is EST.13_1",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "Year 2015-2025"
 ]
}

 The dataset includes 754486 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005159-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28532549
title: Supplementary Material for: A Rare Form of Reflex Epilepsy: Eating Epilepsy, A Case Report.

description: Reflex epilepsies are rare syndromes where seizures are triggered by particular stimuli or activities that may be motor, sensory, or cognitive in nature. Eating-induced seizures are an uncommon presentation of reflex epilepsy. Many etiologies, including genetics, ethnicity, and specific foods and eating behaviors, are linked to eating epilepsy.
In this case report, a 55-year-old man who was admitted to the neurology clinic with epileptic seizures that occurred many times after spicy meals is presented. His neurological examination and metabolic values were normal. MRI showed non-spesific white matter changes. An interictal active epileptic focus was detected in the left temporal region in interictal EEG. The patient was started on valproic acid treatment at 1000 mg/day. Anti-seizure treatment controlled the seizures and normalized the EEG abnormalities.
DOI: 10.13020/rnn4-bv86
title: Zebra Mussel Safari: A Participatory Science Program to Guide Management Decisions

description: The Zebra Mussel Safari program is a participatory science initiative aimed at monitoring zebra mussel (Dreissena polymorpha) populations within Minnesota lakes. This dataset includes materials designed to support and ease volunteers' participation in the program. Additionally, the dataset includes zebra mussel abundance data collected from the seven Minnesota lakes involved in the 2023 program.
description: These data contain the materials provided to volunteers, including a photo analysis background template, installation instructions, an R Shiny application, a Qualtrics survey, and video tutorials. The CSV file contains zebra mussel abundance data for the 2023 season in which four counting methods were compared: manual hand counts, camera photos analyzed via CountThings, participant-submitted photos analyzed via CountThings, and camera photos manually adjusted for any errors in CountThings. The data spans across the 7 Minnesota lakes participating in the 2023 season. Additionally, a CSV file for the 2024 season is included, containing zebra mussel count data collected using the participant-submitted photos from 15 Minnesota lakes.
DOI: 10.15468/dl.kmzpht
title: Occurrence Download

description: A dataset containing 2133532 records in GBIF matching the query:
SELECT
 "year",
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude,
 COALESCE(coordinateUncertaintyInMeters, 1000)) AS mgrsCode,
 speciesKey,
 species,
 family,
 datasetName,
 datasetKey,
 COUNT(*) AS n,
 MIN(COALESCE(coordinateUncertaintyInMeters, 1000)) AS minCoordinateUncertaintyInMeters,
 IF(ISNULL(family), NULL, SUM(COUNT(*)) OVER (PARTITION BY family)) AS familyCount
 FROM
 occurrence
 WHERE
 occurrenceStatus = 'PRESENT'
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND level1gid = 'BEL.2_1'
 AND "year" &gt;= 2007
 AND "year" &lt;= 2022
 AND speciesKey IS NOT NULL
 AND decimalLatitude IS NOT NULL
 AND decimalLongitude IS NOT NULL
 AND class = 'Aves'
 AND collectionCode != 'ABV'
 GROUP BY
 "year",
 mgrsCode,
 speciesKey,
 species,
 family,
 datasetName,
 datasetKey
 ORDER BY
 "year" ASC,
 mgrsCode ASC,
 speciesKey ASC,
 datasetName ASC

 The dataset's 2133532 records were derived from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005168-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cct5c4g
title: CCDC 749925: Experimental Crystal Structure Determination

description: Related Article: A.Pitaluga,R.Seisceiras,L.D.Prado,S.M.S.V.Wardell,J.L.Wardell|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.ccy7mnf
title: CCDC 871275: Experimental Crystal Structure Determination

description: Related Article: La-Sheng Long|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.ccyb57n
title: CCDC 873711: Experimental Crystal Structure Determination

description: Related Article: La-Sheng Long|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2dgc3c
title: CCDC 2218332: Experimental Crystal Structure Determination

description: Related Article: Sascha Schaefer|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h57xv
title: CCDC 2298957: Experimental Crystal Structure Determination

description: Related Article: Olivier Lorthioir, Niall Anderson, Scott Boyd, Luca Carlino, Paul Davey, William Hodds, Megan Howard, Marika Lindhagen, Katie Proctor, Okky Dwichandra Putra, Theo Smith, Oliver Turner, Alfie Woodhouse, Millie Woodward|2024|Org.Lett.|26|9179|doi:10.1021/acs.orglett.4c02221
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2j3vyg
title: CCDC 2327416: Experimental Crystal Structure Determination

description: Related Article: Draginja Mrvoš-Sermek, Marina Tašner, Darko Vušak, Nenad Judaš, Kinga Wzgarda-Raj, Ivica Đilović, Dubravka Matković-Čalogović|2025|CrystEngComm|27|356|doi:10.1039/D4CE01070A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.hjgwwh
title: Occurrence Download

description: A dataset containing 266800 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is India",
 "OccurrenceStatus is Present",
 "TaxonKey is Streptopelia decaocto (Frivaldszky, 1838)"
 ]
}

 The dataset includes 266800 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005162-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v8uqvm
title: Occurrence Download

description: A dataset containing 1056 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Europe",
 "Country is Estonia",
 "GadmGid is EST.13_1",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "TaxonKey is Amphibia",
 "Year 2015-2025"
 ]
}

 The dataset includes 1056 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005164-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60893/figshare.jap.28400096
title: supplemental material

description: Additional information is provided in the supplementary materials, including the MEAM and Morse potential parameters, the Stillinger-Weber (SW) potential parameters and expressions，and Variation of the number of atoms in the WS₂ film with different incident energies and incident angles.
DOI: 10.15468/dl.f4ghn8
title: Occurrence Download

description: A dataset containing 13934 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Anodorhynchus hyacinthinus (Latham, 1790)"
 ]
}

 The dataset includes 13934 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005165-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.