cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.y94s94
title: Occurrence Download

description: A dataset containing 18005 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pyroderus scutatus)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 18005 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025453-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2uhsyf
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Anatolichthys danfordii)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025455-250802193616735/datasets/export for details.
DOI: 10.5281/zenodo.16642464
title: RAW DATA - The role of aborescent octocorals in shaping the diversity and composition of benthic communities

description: Spreadsheets with the raw data from the Mediterranean and Antarctic remotely operated vehicle dives used for the Spearman rank correlation analyses, linear regression models, Principal coordinates analyses and PERMANOVA.


R code use to carry out all these analyses is also included.
DOI: 10.5281/zenodo.3828973
title: RAW DATA - The role of aborescent octocorals in shaping the diversity and composition of benthic communities

description: Spreadsheets with the raw data from the Mediterranean and Antarctic remotely operated vehicle dives used for the Spearman rank correlation analyses, linear regression models, Principal coordinates analyses and PERMANOVA.


R code use to carry out all these analyses is also included.
DOI: 10.15468/dl.bcujjf
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salsola zaidamica",
 "Geometry POLYGON ((26.04335 1.226334, 135.0263 1.226334, 135.0263 55.38525, 26.04335 55.38525, 26.04335 1.226334))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 26 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025456-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29835380
title: Physics-Informed Neural Networks to Develop Site-specific Pedotransfer Functions

description: Pedotransfer functions (PTFs) are widely used to estimate soil hydraulic properties based on easily accessible soil information, playing an important role in the parameterization of earth surface models.The “SPTF_SUR.py” script serves as an integrated suite of SPTF models and surrogate models. The “SPTFs.ipynb” script presents a case study for the definition, training, and evaluation of SPTF(FXW-M3), incorporating relevant data and technical details. (python&gt;=3.11, pytorch&gt;=2.0.0)
DOI: 10.6084/m9.figshare.29835380.v2
title: Physics-Informed Neural Networks to Develop Site-specific Pedotransfer Functions

description: Pedotransfer functions (PTFs) are widely used to estimate soil hydraulic properties based on easily accessible soil information, playing an important role in the parameterization of earth surface models.The “SPTF_SUR.py” script serves as an integrated suite of SPTF models and surrogate models. The “SPTFs.ipynb” script presents a case study for the definition, training, and evaluation of SPTF(FXW-M3), incorporating relevant data and technical details. (python&gt;=3.11, pytorch&gt;=2.0.0)
DOI: 10.6084/m9.figshare.29835380.v1
title: Site-specific Pedotransfer Functions (SPTFs)

description: Pedotransfer functions (PTFs) are widely used to estimate soil hydraulic properties based on easily accessible soil information, playing an important role in the parameterization of earth surface models.The “SPTF_SUR.py” script serves as an integrated suite of SPTF models and proxy models. The “SPTFs.ipynb” script presents a case study for the definition, training, and evaluation of SPTF(FXW-M3), incorporating relevant data and technical details. (python&gt;=3.11, pytorch&gt;=2.0.0)
DOI: 10.5281/zenodo.6443356
title: A repository of spherical (t,t)-designs

description: Spherical (t,t)-designs in Rd are arrangements of points on the sphere Sd-1 (possibly with weights) which are spaced "far apart from each other": they are finite sets in such that the integral over the sphere of each homogeneous polynomial of degree 2t in d variables is equal to its average value on the set, and generalise the notion of a spherical t-design and half-design which can be found for example in Section 3.3 of Conway and Sloane (1993), and the notion of a tight frame from harmonic analysis (Waldron, 2018). There is a generalisation of the definition of a spherical (t,t)-design to complex point arrangements: a complex spherical (t,t)-design is a finite set on the complex (d-1)-sphere (again, possibly with weights) which integrates polynomials which are separately homogeneous in d variables and their conjugates, such that the total degree in the variables is t and the total degree in the conjugate variables is also t. Similar definitions can also be made over the quaternions and octonions (Waldron, 2020). For a more precise discussion, history, and a list of prior results and examples see the references list.

This repository is a set of files containing various spherical (t,t)-designs and near-designs - point configurations which minimise the design potential function of Section 6.16 of Waldron (2018). These files were produced using the Manopt software (Boumal et. al., 2014), and the source code may be found in the aelzenaar/tightframes GitHub repository.

The easiest way to view the dataset is to download index.html and the four .tgz files; decompress the tar files so that index.html is in the same directory as the four *_out directories, and open index.html in a web browser. The design itself can then be found in either Magma format (a text file) or .mat format (open in Matlab, and then the design is found in the 'result' variable).

In Elzenaar and Waldron (2025) we discuss many of the new designs which appear in these data.
DOI: 10.5281/zenodo.8126277
title: A repository of spherical (t,t)-designs

description: Spherical (t,t)-designs in Rd are arrangements of points on the sphere Sd-1 (possibly with weights) which are spaced "far apart from each other": they are finite sets in such that the integral over the sphere of each homogeneous polynomial of degree 2t in d variables is equal to its average value on the set, and generalise the notion of a spherical t-design and half-design which can be found for example in Section 3.3 of Conway and Sloane (1993), and the notion of a tight frame from harmonic analysis (Waldron, 2018). There is a generalisation of the definition of a spherical (t,t)-design to complex point arrangements: a complex spherical (t,t)-design is a finite set on the complex (d-1)-sphere (again, possibly with weights) which integrates polynomials which are separately homogeneous in d variables and their conjugates, such that the total degree in the variables is t and the total degree in the conjugate variables is also t. Similar definitions can also be made over the quaternions and octonions (Waldron, 2020). For a more precise discussion, history, and a list of prior results and examples see the references list.

This repository is a set of files containing various spherical (t,t)-designs and near-designs - point configurations which minimise the design potential function of Section 6.16 of Waldron (2018). These files were produced using the Manopt software (Boumal et. al., 2014), and the source code may be found in the aelzenaar/tightframes GitHub repository.

The easiest way to view the dataset is to download index.html and the four .tgz files; decompress the tar files so that index.html is in the same directory as the four *_out directories, and open index.html in a web browser. The design itself can then be found in either Magma format (a text file) or .mat format (open in Matlab, and then the design is found in the 'result' variable).

In Elzenaar and Waldron (2025) we discuss many of the new designs which appear in these data.
DOI: 10.5517/ccdc.csd.cc1zs5zx
title: CCDC 1840500: Experimental Crystal Structure Determination

description: Related Article: Khairil A. Jantan, James M. McArdle, Lorenzo Mognon, Valentina Fiorini, Luke A. Wilkinson, Andrew J. P. White, Stefano Stagni, Nicholas J. Long, James D. E. T. Wilton-Ely|2019|New J.Chem.|43|3199|doi:10.1039/C8NJ06455E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ksws1
title: CCDC 2377414: Experimental Crystal Structure Determination

description: Related Article: Rizwan Ashraf, Zohra Khalid, Qi-Pin Qin, Muhammad Adnan Iqbal, Tugba Taskin-Tok, İmren Bayil, Ching Kheng Quah, Nur Aisyah Mohamad Daud, Faleh Zafer Alqahtany, Mohammed A. Amin, Salah M. El-Bahy|2025|Bioorg.Chem.|160|108435|doi:10.1016/j.bioorg.2025.108435
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2ksww4
title: CCDC 2377417: Experimental Crystal Structure Determination

description: Related Article: Rizwan Ashraf, Zohra Khalid, Qi-Pin Qin, Muhammad Adnan Iqbal, Tugba Taskin-Tok, İmren Bayil, Ching Kheng Quah, Nur Aisyah Mohamad Daud, Faleh Zafer Alqahtany, Mohammed A. Amin, Salah M. El-Bahy|2025|Bioorg.Chem.|160|108435|doi:10.1016/j.bioorg.2025.108435
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mdrqj
title: CCDC 2425338: Experimental Crystal Structure Determination

description: Related Article: Dongyang Chen, Hui Wang, Feng Huang, David B. Cordes, Aidan P. McKay, Kai Wang, Xiao-Hong Zhang, Eli Zysman-Colman|2025|Adv.Funct.Mater.|35|2506189|doi:10.1002/adfm.202506189
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2mdrrk
title: CCDC 2425339: Experimental Crystal Structure Determination

description: Related Article: Dongyang Chen, Hui Wang, Feng Huang, David B. Cordes, Aidan P. McKay, Kai Wang, Xiao-Hong Zhang, Eli Zysman-Colman|2025|Adv.Funct.Mater.|35|2506189|doi:10.1002/adfm.202506189
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.nxxmk2
title: Occurrence Download

description: A dataset containing 265 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Clarias theodorae)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 265 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025459-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16761648
title: Midnight Simultaneous Observations of Range Spread-F and Multiple F-Layer Stratifications During the May 11-12 Geomagnetic Superstorm (GPS_data)
DOI: 10.5281/zenodo.16761649
title: Midnight Simultaneous Observations of Range Spread-F and Multiple F-Layer Stratifications During the May 11-12 Geomagnetic Superstorm (GPS_data)
DOI: 10.15468/dl.3sk3fh
title: Occurrence Download

description: A dataset containing 68470 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pyrilia haematotis)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 68470 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025438-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bjkk4j
title: Occurrence Download

description: A dataset containing 17 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Seriphidium kaschgaricum",
 "Geometry POLYGON ((26.04335 1.226334, 135.0263 1.226334, 135.0263 55.38525, 26.04335 55.38525, 26.04335 1.226334))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 17 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025460-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12702240
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.17632/3y5s2f3py6
title: Performance of ‘Triple-D’ and ‘Quadruple-D’ Scores Compared to a Regression-Based Predictive Model for Treatment Outcomes in Extracorporeal Shock Wave Lithotripsy: A 1000-Treatment Series Using the Dornier Compact Delta III Pro

description: A retrospective cohort study was conducted including 1,000 adult patients undergoing ESWL using the Dornier Compact Delta® III Pro lithotripter at a tertiary hospital in Doha, Qatar, between May 2022 and November 2023. Data on demographics, key stone parameters (size, density, skin-to-stone distance), and treatment details were collected. Key predictors of ESWL treatment failure were evaluated using multivariable logistic regression with internal validation. The predictive performances of the Triple-D, Quadruple-D, and regression-based models were compared using receiver operating characteristic (ROC) analysis, with differences assessed by DeLong’s test. Model calibration and clinical utility were further examined through calibration plots and decision curve analysis (DCA).
DOI: 10.17632/3y5s2f3py6.1
title: Performance of ‘Triple-D’ and ‘Quadruple-D’ Scores Compared to a Regression-Based Predictive Model for Treatment Outcomes in Extracorporeal Shock Wave Lithotripsy: A 1000-Treatment Series Using the Dornier Compact Delta III Pro

description: A retrospective cohort study was conducted including 1,000 adult patients undergoing ESWL using the Dornier Compact Delta® III Pro lithotripter at a tertiary hospital in Doha, Qatar, between May 2022 and November 2023. Data on demographics, key stone parameters (size, density, skin-to-stone distance), and treatment details were collected. Key predictors of ESWL treatment failure were evaluated using multivariable logistic regression with internal validation. The predictive performances of the Triple-D, Quadruple-D, and regression-based models were compared using receiver operating characteristic (ROC) analysis, with differences assessed by DeLong’s test. Model calibration and clinical utility were further examined through calibration plots and decision curve analysis (DCA).
DOI: 10.5284/1132566
title: Corpus Vitrearum Medii Aevi Digital Archive

description: The Corpus Vitrearum Medii Aevi (CVMA), founded in 1949, is the international research project dedicated to recording medieval stained glass. This digital collection comprises a searchable picture archive of stained glass and a selection of out-of-print and unpublished documents.
DOI: 10.15468/dl.fyzwyz
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Sternarchorhynchus montanus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025461-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cybzk3
title: Occurrence Download

description: A dataset containing 7417 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pyrrholaemus brunneus)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 7417 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025462-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/n2pyyck4vh
title: Plan estratégico de liderazgo para el fortalecimiento del empoderamiento femenino en mujeres jóvenes de 18 a 35 años en entornos laborales de Usulután, El Salvador.

description: Este proyecto diseña e implementa un plan estratégico para potenciar el liderazgo en mujeres jóvenes, fortaleciendo su autoconfianza y desarrollo profesional. A través de talleres, actividades prácticas y seguimiento personalizado, se busca generar un impacto positivo en su empoderamiento y participación en entornos laborales, contribuyendo así a la equidad de género y al progreso socioeconómico de la región.
DOI: 10.17632/n2pyyck4vh.1
title: Plan estratégico de liderazgo para el fortalecimiento del empoderamiento femenino en mujeres jóvenes de 18 a 35 años en entornos laborales de Usulután, El Salvador.

description: Este proyecto diseña e implementa un plan estratégico para potenciar el liderazgo en mujeres jóvenes, fortaleciendo su autoconfianza y desarrollo profesional. A través de talleres, actividades prácticas y seguimiento personalizado, se busca generar un impacto positivo en su empoderamiento y participación en entornos laborales, contribuyendo así a la equidad de género y al progreso socioeconómico de la región.
DOI: 10.15468/dl.eyu5tv
title: Occurrence Download

description: A dataset containing 13565 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Setaria viridis",
 "Geometry POLYGON ((26.04335 1.226334, 135.0263 1.226334, 135.0263 55.38525, 26.04335 55.38525, 26.04335 1.226334))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 13565 records from 254 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0025463-250802193616735/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5066/p9ef18w0
title: Laboratory analysis of liver tissue and cells from mallard ducks (Anas platyrhynchos) after oral exposure to microcystin-LR, 2021

description: With mortalities of avian wildlife sometimes inferred to be associated with exposure to harmful algal bloom events, the need for clarifying diagnostic parameters for helping to justify case diagnoses is needed. Hence, adult female mallard ducks (Anas platyrhynchos) were exposed to a controlled administration of microcystin-LR, and their liver cells were studied for biomarkers of exposure and effect by using flow cytometric and microscopic methods, and an enzyme assay.
DOI: 10.17632/vt2kkzxp24
title: Broiler heat stress experiment data Miura20250807

description: This is the raw data on the effects of heat stress on broiler growth, feed intake, and gene expression in the liver. The methods are described below.
Animal rearing and feeding
A total of 198 healthy 0-day-post-hatching (dph) broiler chicks were purchased from Mori Breeding Farm and used in this study. The chicks were randomly divided, with 22 chicks placed in each of nine 1.5-m2 cages. Three cages were then assigned to each of the three dietary groups (control, DSP 0.01%, and DSP 0.1%), to give a triplicate per group (n = 22 per replicate). After 14 days, the cage size was expanded to 3.0 m2. 
Experimental feeds were formulated based on a commercial experimental diet, which at 21 dph was switched to a feed formulated for the later rearing period. The commercial feed-grade DSP product (Silkrose, Shintoa, Tokyo, Japan) was supplemented to broiler feed depending on the experimental dose. DSP was previously confirmed to exhibit immunostimulatory properties based on nitric oxide (NO) production assays using RAW264.7 cells (Ali et al., 2021). 
The room temperature was gradually increased from 25°C to 30°C on 22 dph, controlled by adjusting the air conditioning. Postmortem examinations of any broilers that died were performed by a veterinarian to identify the causes of death and clinical signs. Feed intake was measured at 7, 14, 21, 28, 35, and 42 dph. The weight of all broilers was measured at 7, 21, 28, 35, 42 dph, and measured partially at 0 and 14 dph.

RT-qPCR
RNA samples were normalized to 500 ng/µL and reverse-transcribed into cDNA using a High-Capacity cDNA Reverse Transcription Kit, according to the manufacturer’s instructions, on a TAdvanced Thermal Cycler. Primers targeting heat shock protein 70 (Hsp70), Hsp90, Hsp40, heat shock factor 2 (Hsf2), lipopolysaccharide-induced tumor necrosis factor-alpha factor (Litaf), interleukin (IL)-6 (Il6), and IL-10 (Il10) were designed based on NCBI resources.