cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3886/e112489v1-87403
title: Replication data for: The Environment and Directed Technical Change

description: This paper introduces endogenous and directed technical change in a growth model with environmental constraints. The final good is produced from "dirty" and "clean" inputs. We show that: (i) when inputs are sufficiently substitutable, sustainable growth can be achieved with temporary taxes/subsidies that redirect innovation toward clean inputs; (ii) optimal policy involves both "carbon taxes" and research subsidies, avoiding excessive use of carbon taxes; (iii) delay in intervention is costly, as it later necessitates a longer transition phase with slow growth; and (iv) use of an exhaustible resource in dirty input production helps the switch to clean innovation under laissez-faire. (JEL O33, O44, Q30, Q54, Q56, Q58)
DOI: 10.34740/kaggle/dsv/2274706
title: Twitter: Trending Tweets per week (updated weekly)
DOI: 10.5281/zenodo.4816557
title: The coseismic and post-seismic deformation of 2020 Nima earthquake obatined by InSAR

description: The two zip files contain the co-seismic deformation and accumulated post-seismic deformation (line of sight ) of ascending and descending orbits of the 2020 Nima earthquake observed by Sentinel-1. The units of co-seismic and post-seismic deformation are meter and millimeter respectively. The positive value is close to the satellite, and the negative value is far away from the satellite. If you have any questions about this data, please contact me via gaohuastudent@163.com.
DOI: 10.6084/m9.figshare.14684286
title: the vipsitelife

description: vipsitelife,vipsitelife
DOI: 10.6084/m9.figshare.14684286.v1
title: the vipsitelife

description: vipsitelife,vipsitelife
DOI: 10.5281/zenodo.4795791
title: Assembly and phylogenomics results using UCEasy from the UCEs

description: UCEasy was used to reproduce the results of the analysis of UCEs of 115 individuals representing 53 species of birds of the genus Turdus, present in the work of Batista et al. (2020), available at https://doi.org/10.1098/rspb.2019.2400. The methodology adopted by UCEasy can be seen at https://github.com/uceasy/uceasy, and we obtained results for different constructions of phylogenetic matrices. Based on the amount of UCE loci, these matrices vary in the degree of missing data allowed, where 75% represents a matrix that allows a greater amount of missing data compared to the 85% matrix, since these percentages represent how complete the matrices of data are.
DOI: 10.5281/zenodo.4795790
title: Assembly and phylogenomics results using UCEasy from the UCEs

description: UCEasy was used to reproduce the results of the analysis of UCEs of 115 individuals representing 53 species of birds of the genus Turdus, present in the work of Batista et al. (2020), available at https://doi.org/10.1098/rspb.2019.2400. The methodology adopted by UCEasy can be seen at https://github.com/uceasy/uceasy, and we obtained results for different constructions of phylogenetic matrices. Based on the amount of UCE loci, these matrices vary in the degree of missing data allowed, where 75% represents a matrix that allows a greater amount of missing data compared to the 85% matrix, since these percentages represent how complete the matrices of data are.
DOI: 10.6084/m9.figshare.14684313
title: Supplementary Files.zip

description: File S1: Dataset of differently ex-pressed genes;File S2: The output of DIA analysis; File S3: The output of DAVID analysis.
DOI: 10.6084/m9.figshare.14684334
title: a.docx

description: hello world
DOI: 10.6084/m9.figshare.14684334.v1
title: a.docx

description: hello world
DOI: 10.6084/m9.figshare.14684337
title: funcational_information.tab

description: Funcational annotation for the genes.<br>
DOI: 10.6084/m9.figshare.14684337.v1
title: funcational_information.tab

description: Funcational annotation for the genes.<br>
DOI: 10.6084/m9.figshare.14684319
title: genes_structure_on_the_sdr.gff3

description: Genes structure on the SDR of Ginkgo<br>
DOI: 10.6084/m9.figshare.14684319.v1
title: genes_structure_on_the_sdr.gff3

description: Genes structure on the SDR of Ginkgo<br>
DOI: 10.6084/m9.figshare.14684322
title: augustus_megre.fa.transdecoder.cds

description: The genes coding sequences information.<br>
DOI: 10.6084/m9.figshare.14684322.v1
title: augustus_megre.fa.transdecoder.cds

description: The genes coding sequences information.<br>
DOI: 10.6084/m9.figshare.14684328
title: augustus_megre.fa.transdecoder.pep

description: Amino acid sequence information<br>
DOI: 10.6084/m9.figshare.14684331.v1
title: the_genome_sequence_information_in_sdr.fa

description: Genome sequence information in sex determination region of Ginkgo.<br>
DOI: 10.6084/m9.figshare.14684331
title: the_genome_sequence_information_in_sdr.fa

description: Genome sequence information in sex determination region of Ginkgo.<br>
DOI: 10.6084/m9.figshare.14684410
title: Additional file 1 of Healthcare planning across healthcare sectors in Baden-Wuerttemberg, Germany: a stakeholder online survey to identify indicators

description: Additional file 1. List of proposed and selected indicators.
DOI: 10.6084/m9.figshare.14684410.v1
title: Additional file 1 of Healthcare planning across healthcare sectors in Baden-Wuerttemberg, Germany: a stakeholder online survey to identify indicators

description: Additional file 1. List of proposed and selected indicators.
DOI: 10.6084/m9.figshare.14684425.v1
title: Additional file 3 of A synthetic probiotic engineered for colorectal cancer therapy modulates gut microbiota

description: Additional file 2: Table S1. Primer sequences used in this study. Table S2. Tumor measurements in the DLD-1 xenograft mouse model. Table S3. Statistical analysis of the DLD-1 xenograft mouse results. Table S4. Measurements in the AOM/DSS mouse model. Table S5. Statistical analysis of the AOM/DSS mouse results. Table S6. Metadata of the samples used for 16s rDNA sequencing. Table S7. Relative abundances of individual ASVs in each sample.
DOI: 10.6084/m9.figshare.14684425
title: Additional file 3 of A synthetic probiotic engineered for colorectal cancer therapy modulates gut microbiota

description: Additional file 2: Table S1. Primer sequences used in this study. Table S2. Tumor measurements in the DLD-1 xenograft mouse model. Table S3. Statistical analysis of the DLD-1 xenograft mouse results. Table S4. Measurements in the AOM/DSS mouse model. Table S5. Statistical analysis of the AOM/DSS mouse results. Table S6. Metadata of the samples used for 16s rDNA sequencing. Table S7. Relative abundances of individual ASVs in each sample.
DOI: 10.6084/m9.figshare.14684434
title: Additional file 2 of Retinoschisis and Norrie disease: a missing link

description: Additional file 2: Table S1. Complete list of proteins identified in the RS1 immunoprecipitated complex analyzed by MALDI-TOF mass spectrometry.
DOI: 10.6084/m9.figshare.14684434.v1
title: Additional file 2 of Retinoschisis and Norrie disease: a missing link

description: Additional file 2: Table S1. Complete list of proteins identified in the RS1 immunoprecipitated complex analyzed by MALDI-TOF mass spectrometry.
DOI: 10.6084/m9.figshare.14684437
title: Additional file 3 of Retinoschisis and Norrie disease: a missing link

description: Additional file 3: Table S2. Complete list of proteins identified in the NDP immunoprecipitated complex analyzed by MALDI-TOF mass spectrometry.
DOI: 10.6084/m9.figshare.14684440
title: Additional file 4 of Retinoschisis and Norrie disease: a missing link

description: Additional file 4: Table S3. List of common proteins identified in both RS1 and NDP MALDI-TOF mass spectrometry data.
DOI: 10.6084/m9.figshare.14684440.v1
title: Additional file 4 of Retinoschisis and Norrie disease: a missing link

description: Additional file 4: Table S3. List of common proteins identified in both RS1 and NDP MALDI-TOF mass spectrometry data.
DOI: 10.6084/m9.figshare.14684437.v1
title: Additional file 3 of Retinoschisis and Norrie disease: a missing link

description: Additional file 3: Table S2. Complete list of proteins identified in the NDP immunoprecipitated complex analyzed by MALDI-TOF mass spectrometry.
DOI: 10.6084/m9.figshare.14684443
title: Additional file 1 of Feasibility of a blended therapy approach in the treatment of patients with inflammatory myopathies

description: Additional file 1. Performed and expected volume (repetitions and sets) and perceived and expected exertion of each exercise.
DOI: 10.6084/m9.figshare.14684443.v1
title: Additional file 1 of Feasibility of a blended therapy approach in the treatment of patients with inflammatory myopathies

description: Additional file 1. Performed and expected volume (repetitions and sets) and perceived and expected exertion of each exercise.
DOI: 10.6084/m9.figshare.14570140
title: Additional file 1 of The authentication and repatriation of a ceremonial tsantsa to its country of origin (Ecuador)

description: Additional file 1: Figure S1. Interactive Stereolithography File. This file allows one to interact with a replica of the tsantsa by rotating and exploring outer and inner surfaces. Note that hair and stitching filaments have been removed.
DOI: 10.6084/m9.figshare.14570140.v1
title: Additional file 1 of The authentication and repatriation of a ceremonial tsantsa to its country of origin (Ecuador)

description: Additional file 1: Figure S1. Interactive Stereolithography File. This file allows one to interact with a replica of the tsantsa by rotating and exploring outer and inner surfaces. Note that hair and stitching filaments have been removed.
DOI: 10.6084/m9.figshare.14684484.v1
title: Additional file 1 of Fertility desires of people living with HIV: does the implementation of a sexual and reproductive health and HIV integration model change healthcare providers’ attitudes and clients’ desires?

description: Additional file 1. Client baseline questionnaire. Client endline questionnaire. Provider baseline questionnaire. Provider endline questionnaire.
DOI: 10.6084/m9.figshare.14684484
title: Additional file 1 of Fertility desires of people living with HIV: does the implementation of a sexual and reproductive health and HIV integration model change healthcare providers’ attitudes and clients’ desires?

description: Additional file 1. Client baseline questionnaire. Client endline questionnaire. Provider baseline questionnaire. Provider endline questionnaire.
DOI: 10.6084/m9.figshare.14684524
title: Additional file 1 of In silico characterization of putative gene homologues involved in somatic embryogenesis suggests that some conifer species may lack LEC2, one of the key regulators of initiation of the process

description: Additional file 1. Details of conifer homologues involved in somatic embryogenesis – Table S1-Table S10.
DOI: 10.6084/m9.figshare.14684551
title: Additional file 1 of Wild plants and the food-medicine continuum—an ethnobotanical survey in Chapada Diamantina (Northeastern Brazil)

description: Additional file 1. Ranking_Taste.
DOI: 10.6084/m9.figshare.14684551.v1
title: Additional file 1 of Wild plants and the food-medicine continuum—an ethnobotanical survey in Chapada Diamantina (Northeastern Brazil)

description: Additional file 1. Ranking_Taste.
DOI: 10.6084/m9.figshare.14684557
title: Additional file 10 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 10. Comparison of changes in transcript levels determined by microarray hybridization with RT-qPCR quantification for selected genes.
DOI: 10.6084/m9.figshare.14684557.v1
title: Additional file 10 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 10. Comparison of changes in transcript levels determined by microarray hybridization with RT-qPCR quantification for selected genes.
DOI: 10.6084/m9.figshare.14684563
title: Additional file 12 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 12. Correlation of point mutations located to ORF, and putative promoter and terminator regions and transcriptomic changes in evolved yeast strains.
DOI: 10.6084/m9.figshare.14684563.v1
title: Additional file 12 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 12. Correlation of point mutations located to ORF, and putative promoter and terminator regions and transcriptomic changes in evolved yeast strains.
DOI: 10.6084/m9.figshare.14684569
title: Additional file 14 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 14. Top enriched GO terms of differentially expressed genes for all strains studied. Only the enriched GO terms of “biological process” and “cellular component” categories were analyzed.
DOI: 10.6084/m9.figshare.14684569.v1
title: Additional file 14 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 14. Top enriched GO terms of differentially expressed genes for all strains studied. Only the enriched GO terms of “biological process” and “cellular component” categories were analyzed.
DOI: 10.6084/m9.figshare.14684590.v1
title: Additional file 5 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 5. Detailed description of mutations identified in evolved yeast strains.
DOI: 10.6084/m9.figshare.14684590
title: Additional file 5 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 5. Detailed description of mutations identified in evolved yeast strains.
DOI: 10.6084/m9.figshare.14684593
title: Additional file 6 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 6. Extended characteristics of nonsynonymously mutated genes of evolved cog7Δ msh2Δ strain.
DOI: 10.6084/m9.figshare.14684596
title: Additional file 7 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 7. Extended characteristics of nonsynonymously mutated genes of evolved nup133Δ msh2Δ strain.
DOI: 10.6084/m9.figshare.14684593.v1
title: Additional file 6 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 6. Extended characteristics of nonsynonymously mutated genes of evolved cog7Δ msh2Δ strain.
DOI: 10.6084/m9.figshare.14684596.v1
title: Additional file 7 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 7. Extended characteristics of nonsynonymously mutated genes of evolved nup133Δ msh2Δ strain.
DOI: 10.6084/m9.figshare.14684602.v1
title: Additional file 9 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 9. Microarray data on all evolved yeast populations subjected to analysis.
DOI: 10.6084/m9.figshare.14684602
title: Additional file 9 of Genetic interaction network has a very limited impact on the evolutionary trajectories in continuous culture-grown populations of yeast

description: Additional file 9. Microarray data on all evolved yeast populations subjected to analysis.
DOI: 10.6084/m9.figshare.14684640
title: Additional file 11 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 11: Table S6. Sample metadata for public transit networks.
DOI: 10.6084/m9.figshare.14684640.v1
title: Additional file 11 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 11: Table S6. Sample metadata for public transit networks.
DOI: 10.6084/m9.figshare.14684649
title: Additional file 14 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 14: Table S7. Source resistome data used in public transit resistomes sourcetracking analysis.
DOI: 10.6084/m9.figshare.14684649.v1
title: Additional file 14 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 14: Table S7. Source resistome data used in public transit resistomes sourcetracking analysis.
DOI: 10.6084/m9.figshare.14684652.v1
title: Additional file 1 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 1: Table S1. Statistical significance of fixed factors selected in determining its roles in microbial diversity and community structure.
DOI: 10.6084/m9.figshare.14684658
title: Additional file 3 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 3: Table S2. Contributional diversity of geographically specific core pathways.
DOI: 10.6084/m9.figshare.14684658.v1
title: Additional file 3 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 3: Table S2. Contributional diversity of geographically specific core pathways.
DOI: 10.6084/m9.figshare.14684664
title: Additional file 5 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 5: Table S3. Taxonomic drivers of functional shifts across public transit systems based on KEGG pathways.
DOI: 10.6084/m9.figshare.14684664.v1
title: Additional file 5 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 5: Table S3. Taxonomic drivers of functional shifts across public transit systems based on KEGG pathways.
DOI: 10.6084/m9.figshare.14684673
title: Additional file 8 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 8: Table S4. Detection of integron elements on co-assembled contigs.
DOI: 10.6084/m9.figshare.14684673.v1
title: Additional file 8 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 8: Table S4. Detection of integron elements on co-assembled contigs.
DOI: 10.6084/m9.figshare.14684676
title: Additional file 9 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 9: Table S5. Species-level taxonomic classification of MAGs, and annotations of city-unique coding sequences.
DOI: 10.6084/m9.figshare.14684652
title: Additional file 1 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 1: Table S1. Statistical significance of fixed factors selected in determining its roles in microbial diversity and community structure.
DOI: 10.6084/m9.figshare.14684676.v1
title: Additional file 9 of Characterization of the public transit air microbiome and resistome reveals geographical specificity

description: Additional file 9: Table S5. Species-level taxonomic classification of MAGs, and annotations of city-unique coding sequences.
DOI: 10.6084/m9.figshare.14532593.v1
title: Additional file 4 of Performance comparison of different microbial DNA extraction methods on bird feces

description: Additional file 4. The microbial species list and relative abundance of each dietary guilds.
DOI: 10.6084/m9.figshare.14532593
title: Additional file 4 of Performance comparison of different microbial DNA extraction methods on bird feces

description: Additional file 4. The microbial species list and relative abundance of each dietary guilds.
DOI: 10.6084/m9.figshare.14684712
title: Additional file 12 of Common pathways and functional profiles reveal underlying patterns in Breast, Kidney and Lung cancers

description: Additional file 12: Table S7. Results table for the survival analysis of GO term values. Description: Rows represent the features analyzed. Columns: feature is the GO identifier, combined. PV is the sum of the negative logarithms in base 10 of the survival p-values in the three cancers, PV.[cancer] is the raw p-value of the survival analysis in cancer [cancer] and adj. PV.[cancer] is the FDR adjusted p-value of the survival analysis in cancer [cancer].
DOI: 10.6084/m9.figshare.14684706
title: Additional file 10 of Common pathways and functional profiles reveal underlying patterns in Breast, Kidney and Lung cancers

description: Additional file 10: Table S5. Metrics results from the algorithm comparison through K-Fold Cross-Validation to classify three types of tumors. Description: The comparison has been made by grouping the tumor samples of the three types of cancer (BRCA, LUAD, KIRC), taking in account either all significant paths or only the top ten most significant ones. The algorithms used were K-Nearest-Neighbor (KNN), Decision Tree (CART), Naive-Bayes Classificator (NB), K-Means clustering (KMN) and Random Forest (RF). The metrics analysed take account of the mean Accuracy of the model testing across all the possible training and test combinations data splits resulting from the K-Fold Cross-Validation, along with its associated Standard Deviation.
DOI: 10.6084/m9.figshare.14684706.v1
title: Additional file 10 of Common pathways and functional profiles reveal underlying patterns in Breast, Kidney and Lung cancers

description: Additional file 10: Table S5. Metrics results from the algorithm comparison through K-Fold Cross-Validation to classify three types of tumors. Description: The comparison has been made by grouping the tumor samples of the three types of cancer (BRCA, LUAD, KIRC), taking in account either all significant paths or only the top ten most significant ones. The algorithms used were K-Nearest-Neighbor (KNN), Decision Tree (CART), Naive-Bayes Classificator (NB), K-Means clustering (KMN) and Random Forest (RF). The metrics analysed take account of the mean Accuracy of the model testing across all the possible training and test combinations data splits resulting from the K-Fold Cross-Validation, along with its associated Standard Deviation.
DOI: 10.6084/m9.figshare.14684709
title: Additional file 11 of Common pathways and functional profiles reveal underlying patterns in Breast, Kidney and Lung cancers

description: Additional file 11: Table S6. Results table for the survival analysis of path values. Description: Rows represent the features analyzed. Columns: feature is the Hipathia path identifier, combined. PV is the sum of the negative logarithms in base 10 of the survival p-values in the three cancers, PV.[cancer] is the raw p-value of the survival analysis in cancer [cancer] and adj. PV.[cancer] is the FDR adjusted p-value of the survival analysis in cancer [cancer].