cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6073/pasta/a17f65c8f7ca194c1670380b209a6d56
title: PRE02 Reproductive effort of Big Bluestem, Indiangrass and Little Bluestem on selected Konza Prairie LTER watersheds

description: This data set focuses on seed production, flowering stem mass, height, and population densities of three dominant prairie grasses: Andropogon gerardii (ANGE), Sorgastrum nutans (SONU), and Schizachyrium scoparium (ANSC) in selected Konza Prairie LTER watersheds. Data set includes measurements of flowering stem height (m), density (no. per sq. m) and production (grams per sq. m) and total seed weight (grams) and production (grams per sq. on 2 soil types (shallow and deep) in watersheds representing different burning-grazing treatment combinations. Specific watersheds sampled have varied over time. Current watersheds include: 001d, R01a, R01b, 002c, 002d, 004a, 004b, 020b, R20a, R20b, 0SpA, 0SpB, 0SuA, 0SuB, 00FA, 00FB, 00WA and 00WB Sampling is done once a year in October/November (end of growing season). (Sampling design slightly altered from PRE01).
DOI: 10.18739/a2x63b68f
title: Multispectral Orthomosaic Image for Upper Nome River (MP31) Beaver Ponds, Seward Peninsula, Alaska, 04 August 2021

description: Emergence of beavers as ecosystem engineers in the New Arctic project focuses on establishing field sites at tundra beaver ponds to study the implications of beaver engineering on hydrology and permafrost. Drones are being used to collect baseline data and track beaver dam building and pond evolution over time. This dataset consists of a multispectral orthomosaic derived from drone surveys on 04 August 2021 at the Upper Nome River, MP31, site on the Seward Peninsula, Alaska. 1500 digital images from five spectral bands were acquired from a DJI Phantom 4 Real-Time Kinematic (DJI P4RTK) quadcopter with a DJI D-RTK 2 Mobile Base Station. The mapped area was around 25 hectares (ha). The drone system was flown at 120 meters (m) above ground level (agl) and images were captured using the hover and capture at point mode. The orientation of the camera was set to 90 degrees (i.e. looking straight down). The along-track overlap and across-track overlap of the mission were set at 80% and 70%, respectively. All images were processed in the software Pix4D Mapper (v. 4.6.4) using the standard 3D Maps workflow and the accurate geolocation and orientation calibration method to produce the multispectral orthophoto mosaic at a spatial resolution of 10 centimeters (cm). Images of a MicaSense calibrated reflectance panel were used for radiometric processing and calibration of each spectral band in the Index Calculator in Pix4D. A Leica Viva differential global positioning system (GPS) provided ground control for the mission and the data were post-processed to WGS84 UTM Zone 3 North.
DOI: 10.18739/a2sf2md49
title: Multispectral Orthomosaic Image for Upper Nome River (MP31) Beaver Ponds, Seward Peninsula, Alaska, 11 August 2022

description: Emergence of beavers as ecosystem engineers in the New Arctic project focuses on establishing field sites at tundra beaver ponds to study the implications of beaver engineering on hydrology and permafrost. Drones are being used to collect baseline data and track beaver dam building and pond evolution over time. This dataset consists of a multispectral orthomosaic derived from drone surveys on 11 August 2022 at the Upper Nome River, MP31, site on the Seward Peninsula, Alaska. 1716 digital images from five spectral bands were acquired from a DJI Phantom 4 Real-Time Kinematic (DJI P4RTK) quadcopter with a DJI D-RTK 2 Mobile Base Station. The mapped area was around 25 hectares (ha). The drone system was flown at 120 meters (m) above ground level (agl) and images were captured using the hover and capture at point mode. The orientation of the camera was set to 90 degrees (i.e. looking straight down). The along-track overlap and across-track overlap of the mission were set at 80% and 70%, respectively. All images were processed in the software Pix4D Mapper (v. 4.7.5) using the standard 3D Maps workflow and the accurate geolocation and orientation calibration method to produce the multispectral orthophoto mosaic at a spatial resolution of 10 centimeters (cm). Images of a MicaSense calibrated reflectance panel were used for radiometric processing and calibration of each spectral band in the Index Calculator in Pix4D. A Leica Viva differential global positioning system (GPS) provided ground control for the mission and the data were post-processed to WGS84 UTM Zone 3 North.
DOI: 10.6084/m9.figshare.21973511.v1
title: Supplementary Table_Antimicrobial Susceptibility Profile of Neisseria gonorrhoeae from Patients Attending a Medical Laboratory, Institut Pasteur de Madagascar.xlsx

description: supporting data for the article:   
Antimicrobial Susceptibility Profile of <em>Neisseria gonorrhoeae </em>from Patients Attending a Medical Laboratory, Institut Pasteur de Madagascar between 2014-2020: Phenotypic and Genomic characterization in a Subset of <em>Neisseria gonorrhoeae</em> Isolates.
DOI: 10.6084/m9.figshare.21973511
title: Supplementary Table_Antimicrobial Susceptibility Profile of Neisseria gonorrhoeae from Patients Attending a Medical Laboratory, Institut Pasteur de Madagascar.xlsx

description: supporting data for the article:   
Antimicrobial Susceptibility Profile of <em>Neisseria gonorrhoeae </em>from Patients Attending a Medical Laboratory, Institut Pasteur de Madagascar between 2014-2020: Phenotypic and Genomic characterization in a Subset of <em>Neisseria gonorrhoeae</em> Isolates.
DOI: 10.18739/a2ns0m03w
title: Orthomosaic Image and Digital Surface Model for the Swan Lake Drained Lake Basin (MP64) Beaver Dams, Seward Peninsula, Alaska, 12 August 2022

description: Emergence of beavers as ecosystem engineers in the New Arctic project focuses on establishing field sites at tundra beaver ponds to study the implications of beaver engineering on hydrology and permafrost. Drones are being used to collect baseline data and track beaver dam building and pond evolution over time. This dataset consists of an orthomosaic and digital surface model (DSM) derived from drone surveys on 12 August 2022 at the Swan Lake Drained Lake Basin, MP64, site on the Seward Peninsula, Alaska. 910 digital images were acquired from a DJI Phantom 4 Real-Time Kinematic (DJI P4RTK) quadcopter with a DJI D-RTK 2 Mobile Base Station. The mapped area was around 140 ha. The drone system was flown at 120 meters (m) above ground level (agl) and flight speeds varied from 8-9 meters/second (m/s). The orientation of the camera was set to 90 degrees (i.e. looking straight down). The along-track overlap and across-track overlap of the mission were set at 80% and 70%, respectively. All images were processed in the software Pix4D Mapper (v. 4.7.5) using the standard 3D Maps workflow and the accurate geolocation and orientation calibration method to produce the orthophoto mosaic and digital surface model at spatial resolutions of 5 and 10 centimeter (cm), respectively. Elevation information derived over waterbodies is noisy and does not represent the surface elevation of the feature. A Leica Viva differential global positioning system (GPS) provided ground control for the mission and the data were post-processed to WGS84 UTM Zone 3 North in Ellipsoid Heights (meters).
DOI: 10.48323/199k8-7er35
title: Effect of curcuminoids on DPPH radical scavenging

description: Scavenging of 2,2-diphenyl-1-picrylhydrazyl (DPPH) radicals by 3b, cysteine, and ascorbic acid (2–200 µM).
Raw data including the absolute values (absorbance subtract ethanol blank) and normalized data (% of control) of all individual experiments was uploaded.
The methods and results were published in Rao et al., Biochem Pharmacol. 2022 Sep:203:115202. doi: 10.1016/j.bcp.2022.115202 
Vehicle (ethanol), compound 3b, cysteine hydrochloride (reference compound, Merck) or ascorbic acid (reference compound, Caesar & Loretz GmbH, Hilden, Germany) were incubated with 2,2-diphenyl-1-picrylhydrazyl (Merck; 50 µM) under shaking in the dark. After 30 min, the absorbance was measured at 520 nm using a Multiskan Spectrum Microplate Reader (Thermo Fisher Scientific).
DOI: 10.18739/a2j09w600
title: Orthomosaic Image and Digital Surface Model for the Swan Lake Drained Lake Basin (MP64) Beaver Dams, Seward Peninsula, Alaska, 03 August 2021

description: Emergence of beavers as ecosystem engineers in the New Arctic project focuses on establishing field sites at tundra beaver ponds to study the implications of beaver engineering on hydrology and permafrost. Drones are being used to collect baseline data and track beaver dam building and pond evolution over time. This dataset consists of an orthomosaic and digital surface model (DSM) derived from drone surveys on 03 August 2021 at the Swan Lake Drained Lake Basin, MP64, site on the Seward Peninsula, Alaska. 757 digital images were acquired from a DJI Phantom 4 Real-Time Kinematic (DJI P4RTK)quadcopter with a DJI D-RTK 2 Mobile Base Station. The mapped area was around 110 hectares (ha). The drone system was flown at 120 meters (m) above ground level (agl) and flight speeds varied from 8-9 meters/second (m/s). The orientation of the camera was set to 90 degrees (i.e. looking straight down). The along-track overlap and across-track overlap of the mission were set at 80% and 70%, respectively. All images were processed in the software Pix4D Mapper (v. 4.6.4) using the standard 3D Maps workflow and the accurate geolocation and orientation calibration method to produce the orthophoto mosaic and digital surface model at spatial resolutions of 5 and 10 centimeters (cm), respectively. Elevation information derived over waterbodies is noisy and does not represent the surface elevation of the feature. A Leica Viva differential global positioning system (GPS) provided ground control for the mission and the data were post-processed to WGS84 UTM Zone 3 North in Ellipsoid Heights (meters).
DOI: 10.18739/a2d795c54
title: Multispectral Orthomosaic Image for the Swan Lake Drained Lake Basin (MP64) Beaver Dams, Seward Peninsula, Alaska, 03 August 2021

description: Emergence of beavers as ecosystem engineers in the New Arctic project focuses on establishing field sites at tundra beaver ponds to study the implications of beaver engineering on hydrology and permafrost. Drones are being used to collect baseline data and track beaver dam building and pond evolution over time. This dataset consists of a multispectral orthomosaic derived from drone surveys on 03 August 2021 at the Swan Lake Drained Lake Basin, MP64, site on the Seward Peninsula, Alaska. 1998 digital images from five spectral bands were acquired from a DJI Phantom 4 Real-Time Kinematic (DJI P4RTK) quadcopter with a DJI D-RTK 2 Mobile Base Station. The mapped area was around 27 hectares (ha). The drone system was flown at 120 meters (m) above ground level (agl) and images were captured using the hover and capture at point mode. The orientation of the camera was set to 90 degrees (i.e. looking straight down). The along-track overlap and across-track overlap of the mission were set at 80% and 70%, respectively. All images were processed in the software Pix4D Mapper (v. 4.6.4) using the standard 3D Maps workflow and the accurate geolocation and orientation calibration method to produce the multispectral orthophoto mosaic at a spatial resolution of 10 centimeters (cm). Images of a MicaSense calibrated reflectance panel were used for radiometric processing and calibration of each spectral band in the Index Calculator in Pix4D. A Leica Viva differential global positioning system (GPS) provided ground control for the mission and the data were post-processed to WGS84 UTM Zone 3 North.
DOI: 10.48323/tvpz6-8fp35
title: Effect of curcuminoids on cell-free microsomal prostaglandin E synthase-1 activity

description: Human mPGES-1 was pre-treated with DMSO or curcuminoids, the formation of PGE2 was initiated by the addition of PGH2 and the mPGES-1 product PGE2 was analyzed by RP-UV-HPLC.
Raw data including the absolute values (ng) and normalized data (% of control) of all individual experiments was uploaded.
The methods and results were published in Rao et al., Biochem Pharmacol. 2022 Sep:203:115202. doi: 10.1016/j.bcp.2022.115202 
mPGES-1 activity was measured in microsomal membranes of IL-1β-treated human lung adenocarcinoma epithelial A549 cells. A549 cells were incubated with IL-1β (2 ng/mL, Peprotech, Hamburg, Germany) in DMEM/high glucose (4.5 g/L) medium plus FCS (10 %) and penicillin/streptomycin (100 U/mL and 100 μg/mL; GE Healthcare, Freiburg, Germany) at 37 °C and 5 % CO2 for 48 h. Cell pellets were harvested and snap-frozen in liquid nitrogen. After resuspension and incubation in ice-cold homogenization buffer [potassium phosphate buffer (0.1 M, pH 7.4), phenylmethylsulphonyl fluoride (1 mM, Cayman Chemical), soybean trypsin inhibitor (60 μg/mL, Cayman Chemical), leupeptin (1 μg/mL, Cayman Chemical), glutathione (2.5 mM, Cayman Chemical) and sucrose (250 mM, Cayman Chemical)] for 15 min on ice, cells were sonicated (3 times, 20 s, each, at 4 °C). Differential centrifugation (first 10,000 × g, 10 min; then 174,000 × g, 60 min; at 4 °C) yielded the microsomal membrane fraction, which was resuspended in homogenization buffer and diluted in potassium phosphate buffer (0.1 M, pH 7.4) plus glutathione (2.5 mM, Cayman Chemical). 
To determine mPGES-1 activity, membranes (containing 2.5–5 μg total protein in 50 μL homogenization buffer) were pre-treated with vehicle (DMSO), test compounds or the mPGES-1 inhibitor MK-886 (10 μM, Cayman Chemical) for 15 min at 4 °C. The formation of PGE2 was initiated by the addition of PGH2 [20 μM in 50 µL potassium phosphate buffer (0.1 M, pH 7.4) containing phenylmethylsulphonyl fluoride (1 mM, Cayman Chemical), soybean trypsin inhibitor (60 μg/mL, Cayman Chemical), leupeptin (1 μg/mL, Cayman Chemical), glutathione (2.5 mM, Cayman Chemical)]. After 1 min incubation at 4 °C, the reaction was terminated with an equal volume of stop solution containing FeCl2 (40 mM) and citric acid (80 mM) as well as the internal standard 11β-PGE2 (1 nmol, Cayman Chemical). The mPGES-1 product PGE2 was extracted by solid phase extraction using Sep-Pak C18 35 cc Vac Cartridges (Waters), separated on Nova-Pak C18 Radial-Pak Column (4 μm, 5 × 100 mm, Waters) under isocratic conditions (30 % acetonitrile, 70 % water, 0.007 % trifluoroacetic acid) at a flow rate of 1 mL/min and detected at 195 nm. The mPGES-1 reference inhibitor MK-886 (10 μM, Cayman Chemical) inhibited PGE2 formation by 86.4 ± 0.5 %.
DOI: 10.48323/cq7hg-n4t94
title: Effect of curcuminoids on 5-lipoxygenase product formation in activated neutrophils

description: Human polymorphonuclear leukocytes (PMNL) were pre-treated with DMSO or curcuminoids, 5-LOX product formation was initiated by arachidonic acid (AA, 20 µM) and A23187 (2.5 µM) and 5-LOX products (LTB4, its isomers et-LTB4, t-LTB4, and 5-H(p)ETE) were analyzed by RP-UV-HPLC. 
Raw data including the absolute values (ng) and normalized data (% of control) of all individual experiments was uploaded.
The methods and results were published in Rao et al., Biochem Pharmacol. 2022 Sep:203:115202. doi: 10.1016/j.bcp.2022.115202 
Freshly isolated human PMNL (6 × 106 cells/mL) were resuspended in PBS pH 7.4 with glucose (1 mg/mL) and CaCl2 (1 mM). Cells were first pre-treated with vehicle (DMSO), test compounds or zileuton (3 μM, Cayman Chemical) for 10 min and then co-incubated with AA (20 μM) and calcium ionophore (A23187, 2.5 μM, Merck) for another 10 min at 37 °C. The reaction was terminated with an equal volume of ice-cold methanol containing the internal standard PGB1 (2 ng, Cayman Chemical). Formed lipid mediators were extracted by solid phase extraction using Sep-Pak C18 35 cc Vac Cartridges (Waters), and major 5-LOX products (LTB4, its all-trans isomers and 5-H(p)ETE) were analyzed by RP-UV-HPLC as described for the determination of cell-free 5-LOX activity. The 5-LOX reference inhibitor zileuton (3 μM, Cayman Chemical) suppressed 5-LOX product formation by 50.0 ± 20.5%.
DOI: 10.5517/ccdc.csd.cc2f6wxg
title: CCDC 2240956: Experimental Crystal Structure Determination

description: Related Article: Si Lok Ko, Eimear Courtney, Mark E Light, David Jones, Gerard McGlacken|2023|Tetrahedron Green Chem|2|100019|doi:10.1016/j.tgchem.2023.100019
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f6xzk
title: CCDC 2240989: Experimental Crystal Structure Determination

description: Related Article: Maxime Tricoire, Nadir Jori, Farzaneh Fadaei Tirani, Rosario Scopelliti, Ivica Z̆ivković, Louise S. Natrajan, Marinella Mazzanti|2023|Chem.Commun.|60|55|doi:10.1039/D3CC05390C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25505/fiz.icsd.cc2dbvn8
title: CSD 2214970: Experimental Crystal Structure Determination

description: Related Article: Rong-Rong Wang, Jing Zhang, Yi-Jia Liu, Gui-Hua Li, Ge-Mei Cai|2023|Dalton Trans.|52|5552|doi:10.1039/D2DT03642H
description: An entry from the Inorganic Crystal Structure Database, the world’s repository for inorganic crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the joint CCDC and FIZ Karlsruhe Access Structures service and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2f76zw
title: CCDC 2241268: Experimental Crystal Structure Determination

description: Related Article: Si Lok Ko, Eimear Courtney, Mark E Light, David Jones, Gerard McGlacken|2023|Tetrahedron Green Chem|2|100019|doi:10.1016/j.tgchem.2023.100019
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2byp33
title: CCDC 2173475: Experimental Crystal Structure Determination

description: Related Article: E.C.L. Jones, K.E. Goldsmith, M.R. Ward, L.M. Bimbo, I.D.H. Oswald|2023|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|79|164|doi:10.1107/S2052520623001282
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2byp44
title: CCDC 2173476: Experimental Crystal Structure Determination

description: Related Article: E.C.L. Jones, K.E. Goldsmith, M.R. Ward, L.M. Bimbo, I.D.H. Oswald|2023|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|79|164|doi:10.1107/S2052520623001282
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2byp55
title: CCDC 2173477: Experimental Crystal Structure Determination

description: Related Article: E.C.L. Jones, K.E. Goldsmith, M.R. Ward, L.M. Bimbo, I.D.H. Oswald|2023|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|79|164|doi:10.1107/S2052520623001282
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2byp22
title: CCDC 2173474: Experimental Crystal Structure Determination

description: Related Article: E.C.L. Jones, K.E. Goldsmith, M.R. Ward, L.M. Bimbo, I.D.H. Oswald|2023|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|79|164|doi:10.1107/S2052520623001282
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2byp88
title: CCDC 2173480: Experimental Crystal Structure Determination

description: Related Article: E.C.L. Jones, K.E. Goldsmith, M.R. Ward, L.M. Bimbo, I.D.H. Oswald|2023|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|79|164|doi:10.1107/S2052520623001282
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2byp66
title: CCDC 2173478: Experimental Crystal Structure Determination

description: Related Article: E.C.L. Jones, K.E. Goldsmith, M.R. Ward, L.M. Bimbo, I.D.H. Oswald|2023|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|79|164|doi:10.1107/S2052520623001282
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2byp77
title: CCDC 2173479: Experimental Crystal Structure Determination

description: Related Article: E.C.L. Jones, K.E. Goldsmith, M.R. Ward, L.M. Bimbo, I.D.H. Oswald|2023|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|79|164|doi:10.1107/S2052520623001282
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2byp99
title: CCDC 2173481: Experimental Crystal Structure Determination

description: Related Article: E.C.L. Jones, K.E. Goldsmith, M.R. Ward, L.M. Bimbo, I.D.H. Oswald|2023|Acta Crystallogr.,Sect.B:Struct.Sci.,Cryst.Eng. and Mat.|79|164|doi:10.1107/S2052520623001282
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.