cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.8en958
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Cybister tripunctatus africanus Laporte, 1835"
 ]
}

 The dataset includes 132 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0315893-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jschc8
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rainieria calceata (Fallén, 1820)"
 ]
}

 The dataset includes 46 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024076-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zkr8sw
title: Occurrence Download

description: A dataset containing 353 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "TaxonKey is Dracopis amplexicaulis (Vahl) Cass."
 ]
}

 The dataset includes 353 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041623-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hf4mhe
title: Occurrence Download

description: A dataset containing 20171 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 2000",
 "Year is less than or equal to 2024",
 "Geometry POLYGON ((-130.7383528944533 -59.46314024951374, -130.7383528944533 32.71876227804215, -26.26729810228821 32.71876227804215, -26.26729810228821 -59.46314024951374, -130.7383528944533 -59.46314024951374))",
 "OccurrenceStatus is Present",
 "TaxonKey is Turdus nigrescens Cabanis, 1861"
 ]
}

 The dataset includes 20171 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053532-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e96y6k
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Gnetum urens Blume",
 "DecimalLatitude is greater than or equal to -90",
 "DecimalLongitude is greater than or equal to -180"
 ]
}

 The dataset includes 84 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028098-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8cv94f
title: Occurrence Download

description: A dataset containing 58 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is Kazakhstan",
 "Country is Kyrgyzstan",
 "Country is Uzbekistan",
 "Country is Tajikistan"
 ]
 },
 "TaxonKey is Tulipa bifloriformis Vved."
 ]
}

 The dataset includes 58 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0310124-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.oa2gkb
title: Occurrence Download

description: A dataset containing 147 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alphitonia petriei Braid & C.T.White",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 147 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041625-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.huwwb8
title: Occurrence Download

description: A dataset containing 445 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Belgium",
 "Year 2015-2020",
 "TaxonKey is Azolla filiculoides Lam."
 ]
}

 The dataset includes 445 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018465-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6vnhna
title: Occurrence Download

description: A dataset containing 107 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Calanthe graciliflora Hayata"
 ]
}

 The dataset includes 107 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0302027-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xcy5m2
title: Occurrence Download

description: A dataset containing 469 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cynoglossum divaricatum Stephan ex Lehm.)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 469 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053533-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y4uwhr
title: Occurrence Download

description: A dataset containing 611 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON Z((-93.52597 16.63137 0,-93.52532 16.61566 0,-93.52741 16.60099 0,-93.52901 16.59496 0,-93.52762 16.59157 0,-93.52296 16.58741 0,-93.51364 16.58197 0,-93.49314 16.57685 0,-93.47629 16.57537 0,-93.46726 16.57228 0,-93.45737 16.56188 0,-93.45519 16.56189 0,-93.45411 16.56399 0,-93.44712 16.58207 0,-93.44444 16.59098 0,-93.43537 16.57972 0,-93.45345 16.54507 0,-93.45156 16.50066 0,-93.45063 16.48235 0,-93.44487 16.47662 0,-93.4372 16.47143 0,-93.40904 16.45928 0,-93.39617 16.45019 0,-93.38023 16.45393 0,-93.33111 16.4513 0,-93.29538 16.43073 0,-93.25864 16.39558 0,-93.25452 16.38985 0,-93.24769 16.38779 0,-93.24089 16.38913 0,-93.23244 16.39047 0,-93.17394 16.41269 0,-93.1693 16.41245 0,-93.13977 16.45261 0,-93.16666 16.46837 0,-93.16678 16.4964 0,-93.17411 16.49812 0,-93.19515 16.49804 0,-93.22557 16.55222 0,-93.25318 16.59413 0,-93.27903 16.65007 0,-93.28263 16.70178 0,-93.52902 16.63816 0,-93.53364 16.63447 0,-93.52597 16.63137 0))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Magnoliopsida"
 ]
}

 The dataset includes 611 records from 35 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0149937-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.w46gh6
title: Occurrence Download

description: A dataset containing 4229 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euphorbia dentata Michx."
 ]
}

 The dataset includes 4229 records from 143 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041628-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fej47h
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-96.02051 28.69059,-97.86621 27.21556,-97.9541 23.24135,-95.84473 18.7295,-91.53809 18.56295,-84.94629 21.53485,-82.83691 27.21556,-88.6377 29.84064,-96.02051 28.69059))",
 "HasCoordinate is true",
 "TaxonKey is Isurus oxyrinchus Rafinesque, 1810",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 19 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011869-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7wr2bw
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON Z((-93.01717 17.5394 0,-93.01663 17.533 0,-93.0175 17.52716 0,-93.01783 17.52055 0,-93.01689 17.51853 0,-93.01526 17.51865 0,-93.01314 17.51949 0,-93.00631 17.51832 0,-92.99798 17.51669 0,-92.99119 17.51695 0,-92.99006 17.51802 0,-92.98868 17.51826 0,-92.98679 17.51839 0,-92.98603 17.51946 0,-92.9845 17.52365 0,-92.9874 17.5309 0,-92.99008 17.53358 0,-92.99021 17.53578 0,-92.98905 17.53775 0,-92.99059 17.53972 0,-92.99343 17.54232 0,-92.99305 17.54394 0,-92.99137 17.54431 0,-92.98725 17.54458 0,-92.98608 17.54783 0,-92.98763 17.54896 0,-92.99048 17.5516 0,-92.99282 17.55197 0,-92.99593 17.55234 0,-93.00073 17.55144 0,-93.01093 17.54864 0,-93.01486 17.54524 0,-93.01717 17.5394 0))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Magnoliopsida"
 ]
}

 The dataset includes 19 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0149941-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ccdu76
title: Occurrence Download

description: A dataset containing 279 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is The mammals collection (ZM) of the Muséum national d'Histoire naturelle (MNHN - Paris)",
 "TaxonKey is Pan troglodytes (Blumenbach, 1775)"
 ]
}

 The dataset includes 279 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0255318-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y4rgas
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Gymnosporangium atlanticum Guyot & Malençon"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041629-160910150852091/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jrp4rc
title: Occurrence Download

description: A dataset containing 440467 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Material sample",
 "BasisOfRecord is Literature Occurrence",
 "BasisOfRecord is Living Specimen"
 ]
 },
 "Year 1900-2020",
 "CoordinateUncertaintyInMeters 0.0-1000000.0",
 "HasCoordinate is true",
 "TaxonKey is Chlorophyta",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 440467 records from 208 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023961-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jry6pk
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Corydoras solox Nijssen & Isbrücker, 1983"
 ]
}

 The dataset includes 15 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0149978-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f2qa9d
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 2015",
 "Month is greater than or equal to December",
 "Country is Canada",
 "TaxonKey is Trichoptera"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0041632-160910150852091/datasets/export for details.
DOI: 10.15468/dl.k3vy5c
title: Occurrence Download

description: A dataset containing 53456 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Stomolophus meleagris Agassiz, 1860"
 ]
}

 The dataset includes 53456 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053517-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j87ec8
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Geophis chalybeus (Wagler, 1830)"
 ]
}

 The dataset includes 18 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036218-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mt9yb8
title: Occurrence Download

description: A dataset containing 125213 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "MULTIPOLYGON(((5.598907470703125 43.481822852999905,5.511016845703125 43.509717009288075,5.400552749633789 43.51127322324609,5.412139892578125 43.54257572246922,5.4547119140625 43.563476493226595,5.480804443359375 43.61122246320032,5.483551025390625 43.6499881760459,5.503549575805664 43.66644361490711,5.598907470703125 43.66985832954972,5.69091796875 43.70362249839005,5.763702392578124 43.661911057260674,5.79254150390625 43.625141236940564,5.804901123046875 43.601278509333646,5.799407958984375 43.5734266934657,5.76507568359375 43.52565074189047,5.71563720703125 43.52166770320007,5.598907470703125 43.481822852999905)))"
 ]
}

 The dataset includes 125213 records from 387 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002449-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ujc6kt
title: Occurrence Download

description: A dataset containing 71456 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pseudotsuga menziesii (Mirb.) Franco"
 ]
}

 The dataset includes 71456 records from 554 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0195390-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wyfytb
title: Occurrence Download

description: A dataset listing the 23 species recorded in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((4.40423 62.44924,10.72717 62.44924,10.72717 66.29494,4.40423 66.29494,4.40423 62.44924))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Scaphopoda"
 ]
}

 The dataset's 23 records were derived from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011378-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mgk8s6
title: Occurrence Download

description: A dataset containing 42 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Acianthera hirsutula (Fawc. & Rendle) Pridgeon & M.W.Chase"
 ]
}

 The dataset includes 42 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011386-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25790610
title: VEP predictions for DMS

description: A compilation of variant effect predictions for 36 human proteins with DMS datasets.
DOI: 10.5281/zenodo.10719295
title: Inorganic biomaterials shape the transcriptome profile to induce endochondral differentiation

description: Minerals play a vital role, working synergistically with enzymes and other cofactors to regulate physiological functions including tissue healing and regeneration. The bioactive characteristics of mineral-based nanomaterials can be harnessed to facilitate in situ tissue regeneration by attracting endogenous progenitor and stem cells and subsequently directing tissue-specific differentiation. Here, we investigate cellular responses of human mesenchymal stem/stromal cells (hMSCs) to traditional bioactive mineral-based nanomaterials, such as hydroxyapatite (nHA), whitlockite (nWH), silicon-dioxide (nSiO2), and the emerging synthetic 2D nanosilicates (nSi). We utilized transcriptome sequencing (RNA-seq) to probe the cellular response and determine the significantly affected signaling pathways due to exposure to these inorganic nanomaterials. Transcriptome profiles of stem cells treated with nanosilicates revealed a stabilized skeletal progenitor state suggestive of endochondral differentiation. This observation is bolstered by enhanced deposition of matrix mineralization in nanosilicate treated stem cells compared to control or other treatments. Specifically, use of 2D nanosilicates directs osteogenic differentiation of stem cells via activation of bone morphogenetic proteins (BMP) and hypoxia-inducible factor 1-alpha (HIF-1a) signaling pathway. This study provides a holistic transcriptomic insight into nanomaterial-cell interactions and predicts downstream effects of nanomaterial induction of endochondral differentiation.
DOI: 10.5281/zenodo.10719296
title: Inorganic biomaterials shape the transcriptome profile to induce endochondral differentiation

description: Minerals play a vital role, working synergistically with enzymes and other cofactors to regulate physiological functions including tissue healing and regeneration. The bioactive characteristics of mineral-based nanomaterials can be harnessed to facilitate in situ tissue regeneration by attracting endogenous progenitor and stem cells and subsequently directing tissue-specific differentiation. Here, we investigate cellular responses of human mesenchymal stem/stromal cells (hMSCs) to traditional bioactive mineral-based nanomaterials, such as hydroxyapatite (nHA), whitlockite (nWH), silicon-dioxide (nSiO2), and the emerging synthetic 2D nanosilicates (nSi). We utilized transcriptome sequencing (RNA-seq) to probe the cellular response and determine the significantly affected signaling pathways due to exposure to these inorganic nanomaterials. Transcriptome profiles of stem cells treated with nanosilicates revealed a stabilized skeletal progenitor state suggestive of endochondral differentiation. This observation is bolstered by enhanced deposition of matrix mineralization in nanosilicate treated stem cells compared to control or other treatments. Specifically, use of 2D nanosilicates directs osteogenic differentiation of stem cells via activation of bone morphogenetic proteins (BMP) and hypoxia-inducible factor 1-alpha (HIF-1a) signaling pathway. This study provides a holistic transcriptomic insight into nanomaterial-cell interactions and predicts downstream effects of nanomaterial induction of endochondral differentiation.
DOI: 10.15468/dl.zh6ph5
title: Occurrence Download

description: A dataset containing 9524 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Phylogenomics and the rise of the angiosperms"
 ]
}

 The dataset includes 9524 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011387-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v3bcyg
title: Occurrence Download

description: A dataset containing 39475 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "OccurrenceStatus is Present",
 "TaxonKey is Euphydryas aurinia (Rottemburg, 1775)"
 ]
}

 The dataset includes 39475 records from 887 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011385-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9jjsy7
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-34.83141 32.44344,-11.59926 32.44344,-11.59926 43.34549,-34.83141 43.34549,-34.83141 32.44344))",
 "TaxonKey is Psenes maculatus Lütken, 1880"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011388-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.11588/data/wgau4q
title: An Automatic Iterative Random Forest approach to derive gully activity maps in large areas with training data scarcity [Data and Source Code]

description: Gullies are landforms with specific patterns of shape, topography, hydrology, vegetation, and soil characteristics. Remote sensing products (TanDEM-X, Sentinel-1, and Sentinel-2) serve as inputs into an iterative algorithm, initialized using a micro-mapping simulation as training data, to map gullies in the northwestern of Namibia. A Random Forest Classifier examines pixels with similar characteristics in a pool of unlabeled data, and gully objects are detected where high densities of gully pixels are enclosed by an alpha shape. Gully objects are used in subsequent iterations following a mechanism where the algorithm uses the most reliable pixels as gully training samples. The gully class continuously grows until an optimal scenario in terms of accuracy is achieved. Results are benchmarked with manually tagged gullies (initial gully labeled area &lt;; 0.3% of the total study area) in two different watersheds (408 and 302 km 2 , respectively) yielding total accuracies of &gt;98%, with 60% in the gully class, Cohen Kappa &gt;0.5, Matthews Correlation Coefficient &gt;0.5, and receiver operating characteristic Area Under the Curve &gt;0.89. Hence, our method outlines gullies keeping low false-positive rates while the classification quality has a good balance for the two classes (gully/no gully). Results show the most significant gully descriptors as the high temporal radar signal coherence (22.4%) and the low temporal variability in Normalized Difference Vegetation Index (21.8%). This research builds on previous studies to face the challenge of identifying and outlining gully-affected areas with a shortage of training data using global datasets, which are then transferable to other large (semi-) arid regions.