cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/mwzcwf5b5k
title: Predicting gold targets using cokriging in SURFER 17

description: Golden Software Inc. included the method of cokriging in the newest version of SURFER 17. This has opened a new tool for interpreting geochemical data. We can use cokriging in SURFER 17 to improve the quality of maps and to predict similar targets in nearby areas. We use cokriging when we want to process data from different datasets. One dataset is always smaller than the other. Here, I first tasted the method with a hypothetical geochemical model combining a smaller dataset of FA gold results with a larger dataset of ICP-MS multi-elements. Later, I applied this method to real data from a soil sampling project in Mozambique. I tested a known mineralized target and also an extended area to predict gold targets. I also had the gold results for the extended area. They allowed me to confirm the effectiveness of cokriging in predicting the new targets. There are many opportunities where we can apply cokriging as a prediction tool. One situation is when an initial sampling returned a group of interesting but isolated gold results. We can then use a cheaper method, like ICP-MS, to better understand the gold distribution in the area.
DOI: 10.17632/wzchzbm58p
title: DropenVideo_V01

description: DropenVideo
Date: April 22, 2024
Author: Raziyeh Akbari, raziyeh.akbari@unimib.it
Alternative contact: Carlo Antonini, carlo.antonini@unimib.it 

DropenVideo, developed in MATLAB, as an extension of Dropen, is a fully automatic frame-by-frame video analysis code for the advancing and receding contact angle determination in quasi-static wetting experiments. 
DropenVideo provides comprehensive data, including contact position, diameter and angles, and related curves. 
This software is developed in SEFILAB at the Department of Materials Science, University of Milano-Bicocca (UNIMIB), and is available at the UNIMIB repository (10.17632/wzchzbm58p). This repository will be updated with the new modified versions of the software. 
If you use this software in your research, please cite the following journal article:

 R. Akbari, C. Antonini, Contact angle measurements: From existing methods to an open-source tool, Advances in Colloid and Interface Science 294 (2021) 102470.
DOI: 10.6084/m9.figshare.21136864.v1
title: Control Cohort - Raw Counts

description: Raw counts associated with the healthy control and FTLD cohorts
DOI: 10.6084/m9.figshare.3803169.v1
title: Supplementary Material for: Early Caries Predicts Low Oral Health-Related Quality of Life at a Later Age

description: Oral health-related quality of life (OHRQOL) is the perceived impact of one's own oral health on daily life. Oral diseases influence children's OHRQOL directly, but OHRQOL might also be related to oral health experiences from the past. We investigate the relation between dental caries at the age of 6 with OHRQOL assessed at the age of 10. This study was conducted within the Generation R Study, a population-based prospective cohort study. Caries experience was assessed with the decayed, missing, and filled teeth index (dmft) at a median age of 6.09 years (90% range: 5.73-6.80). OHRQOL was assessed with a short form of the Child Oral Health Impact Profile at the children's age of 9.79 years (9.49-10.44). In total, 2,833 children participated in this study, of whom 472 (16.6%) had mild caries (dmft 1-3) and 228 (8.0%) had severe caries (dmft &gt;3). The higher the dmft score at the age of 6, the lower the OHRQOL at the age of 10 (p &lt; 0.001). The children with severe caries at the age of 6 had significantly higher odds of being in the lowest OHRQOL quartile at the age of 10 (OR = 1.69; 95% CI: 1.17-2.45). Our study highlights the importance of oral health during childhood, because those who get a compromised start to oral health are much more likely to follow a trajectory which will lead to poor oral health (-related QOL) later. OHRQOL is not only related to current oral health experiences but also to oral health experiences from the past.
DOI: 10.17632/ssjhbnffyc
title: Bibliometric Analysis of the Research on Circular Economy in the European Union

description: Scripts in R to produce the bibliometric analysis data regarding circular economy research in the European Union, based on Scopus.
The Scopus databases are not included because they are copyrighted. 
This dataset also includes the thesaurus file for the analysis in VOSviewer and the map file + network file with the most frequent 1000 words extracted from the Scopus data files (not included).
DOI: 10.6084/m9.figshare.1149952.v1
title: A network of books about US politics published around the time of the 2004 presidential election and sold by the online bookseller Amazon.com

description: Books about US politics<br>Compiled by Valdis Krebs Nodes represent books about US politics sold by the online bookseller<br>Amazon.com. Edges represent frequent co-purchasing of books by the same<br>buyers, as indicated by the "customers who bought this book also bought<br>these other books" feature on Amazon. Nodes have been given values "l", "n", or "c" to indicate whether they are<br>"liberal", "neutral", or "conservative". These alignments were assigned<br>separately by Mark Newman based on a reading of the descriptions and<br>reviews of the books posted on Amazon. These data should be cited as V. Krebs, unpublished,<br>http://www.orgnet.com/.
DOI: 10.6084/m9.figshare.12073065.v1
title: Data dan R Notebook untuk <i>Linguistik Korpus Kuantitatif dan Kajian Semantik Leksikal Sinonim Emosi Bahasa Indonesia</i>

description: Repositori data dan R Notebook untuk makalah "Linguistik Korpus Kuantitatif dan Kajian Semantik Leksikal Sinonim Emosi Bahasa Indonesia" (Rajeg, 2020):Rajeg, Gede Primahadi Wijaya (2020): Linguistik Korpus Kuantitatif dan Kajian Semantik Leksikal Sinonim Emosi Bahasa Indonesia. figshare. Preprint. https://doi.org/10.6084/m9.figshare.12012369Data dan R Notebook ini berlisensi <i>Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International</i><br><b>Sitiran untuk repositori data ini:</b>Rajeg, Gede Primahadi Wijaya (2020): Data dan R Notebook untuk <i>Linguistik Korpus Kuantitatif dan Kajian Semantik Leksikal Sinonim Emosi Bahasa Indonesia</i>. figshare. Dataset. https://doi.org/10.6084/m9.figshare.12073065
DOI: 10.6084/m9.figshare.13200788.v1
title: Ferreira et al (nosode) raw data.xlsx

description: Raw data related to article by Ferreira et al on the effect of nosodes on plant parasitic nematodes<br>
DOI: 10.6084/m9.figshare.25521880.v1
title: Occupancy of Roe Deer, Water Deer, and Wild Boar in Wind Farm-Integrated Forest Ecosystems - A Case Study in Korea

description: Understanding the impact of anthropogenic structures on wildlife is essential for balancing ecosystem services. This study explored the impacts of anthropogenic disturbances, particularly wind farms, on South Korean Forest ecosystems utilizing spatial occupancy models and camera trap survey data. We examined the occupancy probability of mammals (roe deer, water deer, and wild boar) around wind farms and identified the influencing factors. The results revealed that roe deer exhibited the highest occupancy probability (0.936), water deer exhibited the lowest (0.503), and wild boar exhibited intermediate values (0.657). For roe deer, the occupancy probability increased with distance from the wind turbine, whereas a high canopy height had a negative impact. Water deer showed a positive correlation with decreasing distance to agricultural land and increasing distance to residential land. Canopy height also contributed positively. Similarly, wild boar displayed a positive association with increased canopy height. Analyzing the impact of wind farm construction time, water deer exhibited a decrease in occupancy probability with more recent construction, whereas wild boars showed the opposite trend. The predicted occupancy probability indicated that roe deer and water deer had the lowest probability near recently built wind farms, whereas wild boar had the highest probability. The results of this study underscore the necessity for continuous monitoring and comprehensive data collection to understand wildlife adaptation mechanisms, avoidance behaviors, and the wind farm forest ecosystem.
DOI: 10.6084/m9.figshare.26771659.v1
title: reference database for GWASkit

description: A tool designed to provide fast all-in-one preprocessing for GWAS summary data files.
DOI: 10.6084/m9.figshare.5242018.v1
title: Erratum: Design and Rationale of ‘Tackling Acute Kidney Injury', a Multicentre Quality Improvement Study

description: Acute kidney injury (AKI) is common and associated with extremely poor outcomes. While strategies to tackle deficiencies in basic care delivery are advocated, robust testing of their effectiveness is also needed. The Tackling AKI study was designed to test whether a complex intervention (consisting of an e-alert, care bundle and education programme) can be successfully implemented across a range of UK hospitals, and whether this will deliver improved patient outcomes. This multicentre, pragmatic clinical trial will employ a cluster randomised stepped wedge design to study this in all adult patients who sustain AKI in the 5 participating hospitals over a 2-year period. The intervention will be supported by a comprehensive change management framework. Data collection will include patient outcomes, process measures and a qualitative assessment of barriers and enablers to implementation. This article describes the rationale and design behind the Tackling AKI study.
DOI: 10.17632/dwzyrh2hfg
title: Data for Energy, CO2 emissions, and value added flows embodied in the international trade of the BRICS group: A comprehensive assessment

description: This data is the interactive data visualizations in the paper named "Energy, CO2 emissions, and value added flows embodied in the international trade of the BRICS group: A comprehensive assessment". It includes all the interactive data of the Figures in this paper.
DOI: 10.17632/tr8y477g8y
title: Replication package for Are Cryptos Different? Evidence from Retail Trading.

description: Replication package for Are Cryptos Different? Evidence from Retail Trading. Please read Replication README for detailed instructions.
DOI: 10.6084/m9.figshare.11879340.v1
title: Escherichia coli pathogenicity GWAS: input genome sequences (updated)

description: Input genomes for a GWAS study on Escherichia coli intrinsic pathogenicity
DOI: 10.6084/m9.figshare.25903681.v1
title: 1 Avian Surveys.csv

description: Bird records included in the study.
DOI: 10.6084/m9.figshare.3568422.v1
title: Appendix B. Rarefaction and extrapolation for species richness (abundance data).

description: Rarefaction and extrapolation for species richness (abundance data).
DOI: 10.6084/m9.figshare.5110756.v3
title: Larix decidua chorology

description: Distribution map of European larch (<i>Larix decidua</i>)<br><br>These maps were produced by combining numerous and heterogeneous data collected from atlas monographs providing complete species distribution maps, from national to regional atlases, occurrence geo-databases, scientific and grey literature.<br>The maps were created using ESRI shapefiles (*.shp, *.shx, *.dbf, *.prj files) archived in the ZIP file. Species range is mapped with polygon features (name suffix "plg"), which define continuous areas of occupancy of the species, and with point features (name suffix "pnt"), which identify more fragmented and isolated populations. If synanthropic occurrences are reported outside the species natural range, additional point and/or polygon shapefiles are also present (suffix "syn"). <br>Polygon borders delimiting species ranges are generalized across the mainland and sea boundaries. This offers the possibility to mask sea areas or to clip and extract the terrestrial range parts using GIS data layers of the users' choice. An additional version of polygon ranges are clipped with a coastline (name suffix "clip"), which have been derived from Natural Earth dataset "Admin 0 - Countries" 1:50M version 4.1.0 (https://www.naturalearthdata.com). <br><br>Please cite as:<br>Caudullo, G., Welk, E., San-Miguel-Ayanz, J., 2017. Chorological maps for the main European woody species. Data in Brief 12, 662-666. DOI: doi.org/10.1016/j.dib.2017.05.007 <br><br>Additional information and used references are on 'supplementary materials' document:<br>https://doi.org/10.6084/m9.figshare.5091901<br><br>Chorological maps are part of the "European Atlas of Forest Tree Species" project:<br>https://w3id.org/mtv/FISE-Comm/v01
DOI: 10.17632/tzdyx3ymj6
title: DDI Link prediction

description: This data presents a GNN (graph neural network) model that has the ability to predict drug-drug, drug-protein and drug-target interactions. Combining such predictions can be particularly useful in combination therapy, as it allows for the consideration of other off-target interactions of the drugs in question. This problem is addressed using a Link Prediction approach based on the GraphSAGE framework and the topology of proteins and other target molecules related to the drugs for predicting DDI (Drug-Drug Interactions).
DOI: 10.17632/v7kkwgnyn5
title: Yamaguchi, Hatori et al., 2024

description: Numerical dataset for Yamaguchi, Hatori et al., 2024.
DOI: 10.6084/m9.figshare.11323838.v1
title: Default simulations of zebrafish patterns

description: We provide model simulations of wild-type, shady, nacre, and pfeffer zebrafish patterns generated using the agent-based model from "Volkening A and Sandstede B (2018) Iridophores as a source of robustness in zebrafish stripes and variability in Danio patterns. Nat. Commun. 9(3231)." These simulations were generated under the default parameter regime presented in the paper. The shady patterns were generated by turning off cell birth for iridiopores; the nacre patterns were generated by turning off cell birth for melanophores; and, the pfeffer patterns were generated by turning off cell birth for xanthophores (see reference above for details). All simulations were run in MATLAB. <br>Each simulation output contains data in the form of .mat files. Within each .mat file are the cell locations of all cells across the simulation, an array that tracks the distances that the cells moved throughout the simulation, vectors containing the number of cells born/dead/present at each day of the simulation, and the x- and y-boundaries of the domain for each day of the simulations. The cell locations are stored in N X 2 X T arrays, where N is an upper bound on the total number of cells in the simulation, and T is the number of days that the simulation was run for. For example, cellsM(N_M:,:,T) contains the x- and y-coordinates of the melanophore cells on the last day of the simulation. Similarly, cellsIl contains the cell coordinates of the loose iridophores, cellsId contains the cell coordinates of the dense iridophores, cellsXc contains the cell coordinates of the dense xanthophores, and cellsXsn contains the cell coordinates of the loose xanthophores. <br><br><br>
DOI: 10.17632/d6h9gt2z77
title: Generation of Clebsch–Gordan coefficients for the point and double groups

description: Abstract The theory of the point and double groups has been widely used in quantum physics to understand the structure and dynamical properties of molecules and solids. In order to construct wave functions for such systems, one often needs the Clebsch-Gordan coefficients for the symmetry groups. Here, we present an extension of the Bethe program to support the calculation of the Clebsch-Gordan coefficients as applied, for instance, in crystal field theory. Apart from the generation of the Clebsch-Gord... Title of program: BETHE Catalogue Id: ADUH_v3_0 Nature of problem The energy levels of atoms, placed into a crystal environment, can be classified by using group theory. In order to represent, for instance, the wave functions, which are associated with these atomic levels, one often requires the Clebsch-Gordan coefficients of the underlying symmetry group of the overall system. These coefficients arise in the coupling of the electronic wave functions (subsystems) and therefore help investigate the interaction between the many-electron atom and the external fie ... Versions of this program held in the CPC repository in Mendeley Data ADUH_v1_0; BETHE.; 10.1016/j.cpc.2004.06.088 ADUH_v2_0; BETHE; 10.1016/j.cpc.2005.03.112 ADUH_v3_0; BETHE; 10.1016/j.cpc.2006.01.001 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.17632/jv24jx8nmz
title: Treatment Outcomes of Pyoderma Gangrenosum Treated with JAK Inhibitors: A Systematic Review

description: Pyoderma gangrenosum (PG) is a neutrophilic dermatosis often associated with systemic disease. It presents with pustules and often well-circumscribed violaceous ulcers. Biologic and corticosteroid immunosuppressive therapy is reserved for severe cases of disease, however Janus Kinase inhibitors (JAKi) are an emerging therapy that have shown positive response in PG cases refractory to conventional treatment. This systematic review evaluates the treatment outcomes of Janus Kinase inhibitors (JAKi) in cases of PG.
DOI: 10.6084/m9.figshare.21971018.v1
title: Supplemental Tables

description: . Raw read count data of proximal and distal <em>Acomys </em>tail skin RNA-Seq samples mapped to the <em>Acomys </em>transcriptome
DOI: 10.6084/m9.figshare.22341697.v1
title: Cash holdings Data for South Africa.xlsx

description: The data includes firm specific, institutional, and macroeconomic variables pertaining to South Africa. The data is collected from 143 non-financial firms listed on the Johannesburg Stock Exchange. Data was collected for period 2000 to 2020 and contains variables to analyse corporate cash holdings.
DOI: 10.17632/34n3j4vhkf
title: Conditional Risk and the Pricing Kernel -- replication code

description: This code replicates the results in Schreindorfer and Sichert (2025) "Conditional Risk and the Pricing Kernel", Journal of Financial Economics
DOI: 10.17632/mgmhz7yfd7
title: Electric vehicle charging station charging load data set

description: The electric vehicle (EV) charging load data is collected from the measured data in a certain area of Zhejiang in January 2019. Collect charging load data of public fast charging stations. The data are the daily EV charging load data record of the area with a sampling interval of 1 h. This data set contains charging load data of three charging stations.And the data provided are standardized charging load data.
DOI: 10.6084/m9.figshare.23173310.v4
title: pore-scale-coupled-two-phase-flow-and-interphase-mass-transfer

description: core images with high porosity and permeability polymesh with high porosity and permeability CO<sub>2</sub> saturation and concentration data
DOI: 10.6084/m9.figshare.28695461.v1
title: Tuning the mechanical behaviour of additively manufactured meta-materials with twinning and meta-harmonics - Raw Data

description: We study micro-architected twinned lattices produced by 3D printing in photopolymeric resin, Rigid 4K from Formlabs, by Stereolithography. Specifically, we present the mechanical behaviour of twinned BCC lattice architecture which shows deviation from the Gibson-Ashby model and a transition from bending-dominated to stretch-dominated behaviour with increased misorientation between adjacent sub-domains coined 'meta-grains'. The tuning of deformation mode also permits tuning of mechanical properties, stiffness and strength, and we introduce a heterogenous distribution of meta-grain sizes, a designt that we coin 'meta-harmonics', by which we enhance the local deformation mode and further increase stiffness.
DOI: 10.6084/m9.figshare.28719737.v1
title: Videos - RBCs

description: Videos show hemozoin tumbling in food vacuoles for malaria parasites that have infected human red blood cells.
DOI: 10.6084/m9.figshare.28787243.v1
title: Supplementary Material for: Global, regional, and national burden of leukemia, 1990–2021: a systematic analysis for the global burden of disease study 2021

description: Background: Leukemia is a group of diseases caused by malignant hematopoietic stem cell clones. Leukemia ranks 13th in incidence and 10th in mortality, according to the Global Cancer Statistics 2022. 
Method: We computed the prevalence, incidence, mortality, and disability-adjusted life years (DALYs) using the Global Burden of Disease (GBD) 2021 data. We rigorously tested the time trend from 1990 to 2021 using Joinpoint regression analysis. This method facilitates the calculation of annual percentage change (APC), average annual percentage change (AAPC), and 95% confidence interval (CI). 
Results: In 2021, the age-standardized prevalence rate (ASPR), age-standardized incidence rate (ASIR), age-standardized mortality rate (ASMR), and age-standardized DALYs rate of leukemia were 21.07 per 100,000 people (95% CI:17.65-23.61), 5.63 per 100,000 people (95% CI: 4.83-6.17), 3.89 per 100,000 people (95% CI:3.34-4.25), and 136.94 per 100,000 people (95% CI:111.89-153.71), respectively. These figures have been obtained globally. Gender comparisons show that men have a higher burden of disease.The 90-94 age group has the highest global prevalence of leukemia, with the prevalence increasing with age. Age-standardized DALYs rates, ASMR, and ASIR demonstrated a general declining trend from 1990 to 2021. The results of the Joinpoint analysis showed that between 2019 and 2021, there was a drop in the global ASPR (APC=-2.68%; 95% CI:-4.76% to -0.54%; P=0.017), ASIR (APC=-2.46%; 95% CI:-3.33% to -1.59%; P&lt;0.001), and ASMR (APC=-1.87%; 95% CI: -2.75% to -0.99%; P&lt;0.001).
Conclusion: The results indicated an overall decrease in the burden of leukemia. These results provide important epidemiological data for the development of novel treatments.
DOI: 10.6084/m9.figshare.4879568.v7
title: Flagellar shape data of chlamydomonas reinhardtii swimming in a Newtonian fluid and a viscocelastic fluid respectively

description: Chlamydomonas reinhardtii demonstrates near-planar strokes when swimming. These data sets give the (X1,X2) positions of a single flagellum in a Newtonian fluid with viscosity 2.6 cP (ntExperiment_X1Component.csv, ntExperiment_X2Component.csv) and in a viscoelastic fluid with viscosity 2.5 cP and polymer relaxation time 0.041 seconds (veExperiment_X1Component.csv, veExperiment_X2Component.csv). Each row of the data gives points along the flagellum spaced approximately 0.34 micrometers apart for a fixed time. The time interval between rows is 0.0017 seconds. The files ntFit.xlsx and veFit.xlsx contain the mean position (M) and the amplitude (A) and phase (Phi) of the dominant frequency at each data point for each stroke, respectively. The period of the dominant frequency is 0.0199 seconds for the Newtonian stroke and 0.0205 seconds for the viscoelastic stroke.All data have a unit if micrometer in length and second in time.
DOI: 10.17632/zxd7nj85gf
title: Lamb Datasets

description: This dataset contains two parts: the lamb datasets and the code. Among them, there are three kinds of the lamb datasets: object detection, pose estimation and behavior recognition datasets; There are two types of code sections: Object Detection - (GAM-YOLOV7-tiny) and Pose Estimation (Soft-NMS-AlexNet).