cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/kkt999sn7b.1
title: Three Datasets Reporting Unexpected Events for Everyday Scenarios

description: The three datasets described in this repository were collected from online experiments distributed via Prolific.co participant system. Together, the three datasets comprise 9,720 text responses of unexpected events participants predicted for everyday scenarios such as going shopping or preparing breakfast. Each event was labelled by at least two independent, human raters on their topic or category (relative to their initial scenario), the valence or sentiment of the event, and whether or not the event mentions words related to the goal stated in the initial scenario. We also include summary data from a pre- and post-test conducted in the course of these experiments, as well as the analysis code in the form of Jupyter Notebooks. We provide this data and relevant code for transparency and reproducibility alongside our paper under review (see Quinn, Campbell, and Keane, submitted). The dataset could be useful in training machine learning models on valence/sentiment of everyday unexpected events.
DOI: 10.17632/wcd5vm2br6.1
title: Factors associated with Diaphorina citri immigration

description: Files represent weekly meteorological data (abiotic factors), citrus flush and Diaphorina citri captures (ACP seasonality) of 1200 yellow stick traps from 9 citrus farms located at São Paulo, Brazil.
DOI: 10.17632/k8pvz45gp2.2
title: Percentage of articles and reviews by countries in sources discontinued by Scopus

description: This dataset is important for estimating the problems with academic policy and quality control in some countries, which result in an excessive (compared to other countries) percentage of publications in questionable journals not providing a proper peer review and/or violating research ethics. Such journals are regularly discontinued from Scopus.
DOI: 10.17632/y46zb27tcg.4
title: Rew data for papper titled "Transgenerational accumulation of methylome changes discovered in commercially reared honey bee (Apis mellifera) queens".

description: In total, 12 queen bee groups were sampled for meythylation analysis in this experiment.
DOI: 10.17632/5kgjjhmcgg.1
title: Data for: 40Ar behaviour and exhumation dynamics of a subduction channel from regional- to crystal-scale high spatial resolution 40Ar/39Ar systematics in phengite

description: Figures, tables and Appendix
DOI: 10.17632/g68pknt2n9.1
title: Data for Pineda et al 2020 Social dynamics obscure the effect of temperature on air breathing in Corydoras catfish

description: In some fishes, the ability to breathe air has evolved to overcome constraints in hypoxic environments but comes at a cost of increased predation. To reduce this risk, some species perform group air breathing. Temperature may also affect the frequency of air breathing in fishes, but this topic has received relatively little research attention. This study examined how acclimation temperature and acute exposure to hypoxia affected the air-breathing behaviour of a social catfish, the bronze corydoras Corydoras aeneus, to determine whether individual oxygen demand influenced the behaviour of entire groups. Groups of seven fish were observed in an arena to measure air-breathing frequency of individuals and consequent group air-breathing behaviour, under three oxygen concentrations (100%, 60%, 20% air saturation) and two acclimation temperatures (25°C & 30°C). Intermittent flow respirometry was used to estimate oxygen demand of individuals. Increasingly severe hypoxia increased air-breathing at the individual and group levels. While there were minimal differences in air-breathing frequency among individuals in response to an increase in temperature, the effect of temperature that did exist manifested as an increase in group air-breathing frequency at 30°C. Groups that were more socially cohesive during routine activity took more breaths but, in most cases, air-breathing among individuals this was not temporally clustered. There was no association between an individual’s oxygen demand and its air-breathing frequency in a group. For Corydoras aeneus, while air-breathing frequency is influenced by hypoxia, behavioural variation among groups could explain the small overall effect of temperature on group air-breathing frequency.
DOI: 10.17632/db3b9wx8yw.1
title: Mrnka_et al_IJPM_2020_Marigold_article

description: This is a primary dataset comprising data from which all figures in our IJPM paper were derived
DOI: 10.17632/px62twzjm4.1
title: Data of carbon fiber reinforced plastics curing under complex temperature programs

description: This work is devoted to the study of CFRP hardening processes. Anisotropy assessment of ultimate strength in static bending is presented. Particularly interesting work is in the fact that the study of carbon fiber-reinforced plastic obtained by hardening in a complex temperature regime. The method of dielectric spectroscopy was used to study the curing of the composite. It was found that, due to a temperature gradient of 8 ° C, the gel point of colder prepreg layers occurs at 4.2 minutes. A method for estimating the gelation time by dielectric spectroscopy is proposed. It was found that the point of gel formation coincides with the minimum extremum on the graph of the derivative of the tangent of the dielectric loss angle versus time. In the graph of the tangent of the dielectric loss angle versus time A technique for modifying carbon fiber reinforced plastic is presented, which contributes to the achievement of uniform gelation throughout the entire thickness of the prepreg. The effect is achieved by introducing a curing catalyst in specified concentrations into various layers of the prepreg. The ultimate strength in static bending of modified CFRP increases by 1.2 times.The anisotropy of the static bending strength in the modified sample is reduced by 11.9%.
DOI: 10.17632/bhvb3xmphc.2
title: Contrasting responses of β-diversity and functional composition of aquatic insect communities across local to regional scales in Neotropical streams

description: Supplementary Material from the original research article entitled: “Contrasting responses of β-diversity and functional composition of aquatic insect communities across local to regional scales in Neotropical streams”. Authors: Gilberto Nicacio, Erlane José Cunha, Neusa Hamada and Leandro Juen. This article is a preprint and has not been certified by peer review available on bioRxiv (DOI: 10.1101/2020.09.14.297077). ARTICLE INFORMATION: In this manuscript, we tested variation in community composition of Ephemeroptera, Trichoptera, and Plecoptera between regions with distinct ecological gradients known as Amazonian interfluves. We calculated beta diversity by computing Sorensen dissimilarities and evaluated environmental factors interact to structure taxonomical and functional composition in streams. Thus, we addressed discussion about effects of habitat structure and geographical distances considered as the main determinants for driving species diversity and distribution. Then, our results provide empirical support for patterns of beta diversity and functional composition of aquatic insect assemblages between regional contexts. In summary, species replacement generated most of community dissimilarities and were associated with geographical distances and environmental variation.
DOI: 10.5281/zenodo.3794685
title: Dataset from: Reed bed vegetation structure and plant species diversity depend on management type and the time period since last management by Andersen et al. 2020 Applied Vegetation Science

description: The dataset behind the paper Reed bed vegetation structure and plant species diversity depend on management type and the time period since last management by Andersen et al. 2020, Applied Vegetation Science, https://doi.org/10.1111/avsc.12531 The data contains information on the vegetation of four reed bed treatments all located within De Østlige Vejler, Denmark: - A 0-year-old harvested reed bed - A 0-year-old cut reed bed (reed stems left behind) - A 3-year-old harvested reed bed - A 25-year-old harvested reed bed
description: {"references": ["Andersen, L.H., Nummi, P., Bahrndorff, S., Pertoldi, C., Tr\u00f8jelsgaard, K., Lauridsen, T.L., Rafn, J., Frederiksen, C.M.S., Kristjansen, M.P., & Bruhn, D. 2020. Reed bed vegetation structure and plant species diversity depend on management type and the time period since last management. Applied Vegetation Science. doi: 0.1111/avsc.12531"]}
DOI: 10.5281/zenodo.3794684
title: Dataset from: Reed bed vegetation structure and plant species diversity depend on management type and the time period since last management by Andersen et al. 2020 Applied Vegetation Science

description: The dataset behind the paper Reed bed vegetation structure and plant species diversity depend on management type and the time period since last management by Andersen et al. 2020, Applied Vegetation Science, https://doi.org/10.1111/avsc.12531 The data contains information on the vegetation of four reed bed treatments all located within De Østlige Vejler, Denmark: - A 0-year-old harvested reed bed - A 0-year-old cut reed bed (reed stems left behind) - A 3-year-old harvested reed bed - A 25-year-old harvested reed bed
description: {"references": ["Andersen, L.H., Nummi, P., Bahrndorff, S., Pertoldi, C., Tr\u00f8jelsgaard, K., Lauridsen, T.L., Rafn, J., Frederiksen, C.M.S., Kristjansen, M.P., & Bruhn, D. 2020. Reed bed vegetation structure and plant species diversity depend on management type and the time period since last management. Applied Vegetation Science. doi: 0.1111/avsc.12531"]}
DOI: 10.5285/7eeb86a3-9d35-4d61-b555-cc005b72eef5
title: The Biological Investigations of Marine Antarctic Systems and Stocks (BIOMASS) Data Set

description: The Biological Investigations of Marine Antarctic Systems and Stocks (BIOMASS) Data Set has been created as part of the BIOMASS Programme directed towards deeper understanding of the ecology of the Southern Ocean, with emphasis on krill (Euphausia superba). Data were collected during 34 cruises through a collaboration by 12 countries during three field experiments. These were: the First International BIOMASS Experiment (FIBEX) from November 1980 to April 1981, the Second International BIOMASS Experiment (SIBEX), Part 1 from October 1983 to May 1984 and Part 2 from November 1984 to April 1985. Data were collected on krill distribution from acoustic surveys and krill population structure from net-hauls. Supporting data from ichthyoplankton net-hauls, oceanographic stations (temperature, salinity, nutrients and chlorophyll-a) and observations of sea-birds at sea were also collected. The BIOMASS Data Set is composed of 43 data files, extracted from the BIOMASS Oracle relational database created by the BIOMASS Data Centre that collated and standardised the data. The validation and correction of the data were carried out during data analysis workshops by the BIOMASS Programme scientists who collected the data. The majority of the BIOMASS data have been utilized during BIOMASS workshops. However, some have not been used and must be regarded as unvalidated. The documentation accompanying the BIOMASS data set lists the known problems and validation status of the data. Funding: The BIOMASS Data Set has been generated by the BIOMASS Data Centre funded by the British Antarctic Survey. Main sponsors of the BIOMASS Programme were the Scientific Committee on Antarctic Research (SCAR) and the Scientific Committee on Oceanic Research (SCOR) in collaboration with the International Association for Biological Oceanography and the Advisory Committee on Marine Resources Research of the Food and Agriculture Organization of the UN.
description: Please see the BIOMASS Data Set Documentation for full description.
description: Please see the BIOMASS Data Set Documentation for full description.
description: Please see the BIOMASS Data Set Documentation for details.
DOI: 10.5281/zenodo.4014913
title: Datasets in 'Methodologies in the Identification, Analysis, and Measurement of Visual Pollution: The Case Study of Intramuros'

description: Dataset tabulated in all the methods and procedures done in the study 'Methodologies in the Identification, Analysis, and Measurement of Visual Pollution: The Case Study of Intramuros'.
DOI: 10.5281/zenodo.4014912
title: Datasets in 'Methodologies in the Identification, Analysis, and Measurement of Visual Pollution: The Case Study of Intramuros'

description: Dataset tabulated in all the methods and procedures done in the study 'Methodologies in the Identification, Analysis, and Measurement of Visual Pollution: The Case Study of Intramuros'.
DOI: 10.15785/sbgrid/197
title: X-Ray Diffraction data from Brucella abortus RicA protein, source of 4N27 structure

description: Diffraction data from this crystal of B. abortus RicA were collected at a temperature of 100 K using a 1? oscillation range.
description: Images were collected on a MAR Mosaic 225 detector. Indexed in P21.
DOI: 10.5281/zenodo.3885775
title: Benchmark Data Set of "epiTracker - A framework for highly-reliable particle tracking for the quantitative analysis of fish movements in tanks"

description: Data set containing five videos differing in fish species (zebrafish and medaka), number of individuals (3 to 10), lighting and type of tank for comparison of tracking algorithms. For each video a Matlab file (*.mat) exists, which contains the position data of the fish. Each of the five videos consists of ~10000 frames, which at a frame rate of 30FPS corresponds to a length of about 5.5min.
DOI: 10.5281/zenodo.3885774
title: Benchmark Data Set of "epiTracker - A framework for highly-reliable particle tracking for the quantitative analysis of fish movements in tanks"

description: Data set containing five videos differing in fish species (zebrafish and medaka), number of individuals (3 to 10), lighting and type of tank for comparison of tracking algorithms. For each video a Matlab file (*.mat) exists, which contains the position data of the fish. Each of the five videos consists of ~10000 frames, which at a frame rate of 30FPS corresponds to a length of about 5.5min.
DOI: 10.6084/m9.figshare.12972929.v1
title: CFMT and NOMT scores separated by gender and group from Evidence for normal novel object recognition abilities in developmental prosopagnosia

description: Supplementary Figure 1. CFMT and NOMT scores separated by gender and group.
DOI: 10.6084/m9.figshare.12972932
title: Reaction times (in ms) for DP and TD on the CFMT and NOMT from Evidence for normal novel object recognition abilities in developmental prosopagnosia

description: Supplementary Figure 3. Individual mean reaction times (in milliseconds) for DP and in-lab and web-based control groups performing the Cambridge Face Memory Test and Novel Object Memory Test.
DOI: 10.6084/m9.figshare.12972929
title: CFMT and NOMT scores separated by gender and group from Evidence for normal novel object recognition abilities in developmental prosopagnosia

description: Supplementary Figure 1. CFMT and NOMT scores separated by gender and group.
DOI: 10.6084/m9.figshare.12972938.v1
title: Cambridge Face Memory Test and Novel Object Memory Test accuracy scores plotted by group from Evidence for normal novel object recognition abilities in developmental prosopagnosia

description: Supplementary Figure 2. Cambridge Face Memory Test and Novel Object Memory Test accuracy scores plotted by group. Regression line based on web control scores.
DOI: 10.6084/m9.figshare.12972932.v1
title: Reaction times (in ms) for DP and TD on the CFMT and NOMT from Evidence for normal novel object recognition abilities in developmental prosopagnosia

description: Supplementary Figure 3. Individual mean reaction times (in milliseconds) for DP and in-lab and web-based control groups performing the Cambridge Face Memory Test and Novel Object Memory Test.
DOI: 10.6084/m9.figshare.12972938
title: Cambridge Face Memory Test and Novel Object Memory Test accuracy scores plotted by group from Evidence for normal novel object recognition abilities in developmental prosopagnosia

description: Supplementary Figure 2. Cambridge Face Memory Test and Novel Object Memory Test accuracy scores plotted by group. Regression line based on web control scores.
DOI: 10.5517/ccdc.csd.cc246v07
title: CCDC 1972778: Experimental Crystal Structure Determination

description: Related Article: Vivek Kumar Singh, S. N. R. Donthireddy, Praseetha Mathoor Illam, Arnab Rit|2020|Dalton Trans.|49|11958|doi:10.1039/D0DT02142C
DOI: 10.5517/ccdc.csd.cc246v18
title: CCDC 1972779: Experimental Crystal Structure Determination

description: Related Article: Vivek Kumar Singh, S. N. R. Donthireddy, Praseetha Mathoor Illam, Arnab Rit|2020|Dalton Trans.|49|11958|doi:10.1039/D0DT02142C
DOI: 10.5517/ccdc.csd.cc24nsqb
title: CCDC 1986192: Experimental Crystal Structure Determination

description: Related Article: Philipp Buday,  Phillip Seeber,  Clara Zens,  Hassan Abul‐Futouh,  Helmar Görls,  Stefanie Gräfe,  Piotr Matczak,  Stephan Kupfer,  Wolfgang Weigand,  Grzegorz Mloston|2020|Chem.-Eur.J.|26|11412|doi:10.1002/chem.202001412
DOI: 10.5517/ccdc.csd.cc24qph2
title: CCDC 1988014: Experimental Crystal Structure Determination

description: Related Article: Yan Liu, Aisen Li, Zhimin Ma, Weiqing Xu, Zhiyong Ma, Xinru Jia|2020|Phys.Chem.Chem.Phys.(PCCP)|22|19195|doi:10.1039/D0CP02783A
DOI: 10.5517/ccdc.csd.cc24w9dr
title: CCDC 1992444: Experimental Crystal Structure Determination

description: Related Article: Diana V. Aleksanyan, Svetlana G. Churusova, Valentina V. Brunova, Ekaterina Yu Rybalkina, Olga Yu Susova, Alexander S. Peregudov, Zinaida S. Klemenkova, Gleb L. Denisov, Vladimir A. Kozlov|2020|J.Organomet.Chem.|926|121498|doi:10.1016/j.jorganchem.2020.121498
DOI: 10.5517/ccdc.csd.cc24w9fs
title: CCDC 1992445: Experimental Crystal Structure Determination

description: Related Article: Diana V. Aleksanyan, Svetlana G. Churusova, Valentina V. Brunova, Ekaterina Yu Rybalkina, Olga Yu Susova, Alexander S. Peregudov, Zinaida S. Klemenkova, Gleb L. Denisov, Vladimir A. Kozlov|2020|J.Organomet.Chem.|926|121498|doi:10.1016/j.jorganchem.2020.121498
DOI: 10.5517/ccdc.csd.cc250btc
title: CCDC 1996332: Experimental Crystal Structure Determination

description: Related Article: Ni-Ni Zhou, Si-Si Ning, Lin-Qiang Li, Jie-Yun Zhang, Ming-Jin Fan, De-Suo Yang, Hai-Tao Zhu|2020|Org.Chem.Front.|7|2664|doi:10.1039/D0QO00522C
DOI: 10.5517/ccdc.csd.cc250bvd
title: CCDC 1996333: Experimental Crystal Structure Determination

description: Related Article: Ni-Ni Zhou, Si-Si Ning, Lin-Qiang Li, Jie-Yun Zhang, Ming-Jin Fan, De-Suo Yang, Hai-Tao Zhu|2020|Org.Chem.Front.|7|2664|doi:10.1039/D0QO00522C
DOI: 10.5517/ccdc.csd.cc250bwf
title: CCDC 1996334: Experimental Crystal Structure Determination

description: Related Article: Ni-Ni Zhou, Si-Si Ning, Lin-Qiang Li, Jie-Yun Zhang, Ming-Jin Fan, De-Suo Yang, Hai-Tao Zhu|2020|Org.Chem.Front.|7|2664|doi:10.1039/D0QO00522C
DOI: 10.5281/zenodo.804264
title: Raw Genotyping data from: Variation in recombination rate and its genetic determinism in sheep populations from combining multiple genomewide datasets

description: Data supporting : <strong>Variation in recombination rate and its genetic determinism in sheep populations from combining multiple genomewide datasets</strong> Morgane Petit, Jean-Michel Astruc, Julien Sarry, Laurence Drouilhet, Stephane Fabre, Carole Moreno, Bertrand Servin http://doi.org/10.1534/genetics.117.300123 <strong>Abstract</strong> Recombination is a complex biological process that results from a cascade of multiple events during meiosis. Understanding the genetic determinism of recombination can help to understand if and how these events are interacting. To tackle this question, we studied the patterns of recombination in sheep, using multiple approaches and datasets. We constructed male recombination maps in a dairy breed from the south of France (the Lacaune breed) at a fine scale by combining meiotic recombination rates from a large pedigree genotyped with a 50K SNP array and historical recombination rates from a sample of unrelated individuals genotyped with a 600K SNP array. This analysis revealed recombination patterns in sheep similar to other mammals but also genome regions that have likely been affected by directional and diversifying selection. We estimated the average recombination rate of Lacaune sheep at 1.5 cM/Mb, identified about 50,000 crossover hotspots on the genome and found a high correlation between historical and meiotic recombination rate estimates. A genome-wide association study revealed two major loci affecting inter-individual variation in recombination rate in Lacaune, including the <em>RNF212</em> and<em> HEI10</em> genes and possibly 2 other loci of smaller effects including the <em>KCNJ15</em> and <em>FSHR</em> genes. Finally, we compared our results to those obtained previously in a distantly related population of domestic sheep, the Soay. This comparison revealed that Soay and Lacaune males have a very similar distribution of recombination along the genome and that the two datasets can be combined to create more precise male meiotic recombination maps in sheep. Despite their similar recombination maps, we show that Soay and Lacaune males exhibit different heritabilities and QTL effects for inter-individual variation in genome-wide recombination rates. Data files are provided in Plink format ( https://www.cog-genomics.org/plink2 ).
DOI: 10.5281/zenodo.757399
title: Raw Genotyping data from: Variation in recombination rate and its genetic determinism in sheep populations from combining multiple genomewide datasets

description: Data supporting : <strong>Variation in recombination rate and its genetic determinism in sheep populations from combining multiple genomewide datasets</strong> Morgane Petit, Jean-Michel Astruc, Julien Sarry, Laurence Drouilhet, Stephane Fabre, Carole Moreno, Bertrand Servin http://doi.org/10.1534/genetics.117.300123 <strong>Abstract</strong> Recombination is a complex biological process that results from a cascade of multiple events during meiosis. Understanding the genetic determinism of recombination can help to understand if and how these events are interacting. To tackle this question, we studied the patterns of recombination in sheep, using multiple approaches and datasets. We constructed male recombination maps in a dairy breed from the south of France (the Lacaune breed) at a fine scale by combining meiotic recombination rates from a large pedigree genotyped with a 50K SNP array and historical recombination rates from a sample of unrelated individuals genotyped with a 600K SNP array. This analysis revealed recombination patterns in sheep similar to other mammals but also genome regions that have likely been affected by directional and diversifying selection. We estimated the average recombination rate of Lacaune sheep at 1.5 cM/Mb, identified about 50,000 crossover hotspots on the genome and found a high correlation between historical and meiotic recombination rate estimates. A genome-wide association study revealed two major loci affecting inter-individual variation in recombination rate in Lacaune, including the <em>RNF212</em> and<em> HEI10</em> genes and possibly 2 other loci of smaller effects including the <em>KCNJ15</em> and <em>FSHR</em> genes. Finally, we compared our results to those obtained previously in a distantly related population of domestic sheep, the Soay. This comparison revealed that Soay and Lacaune males have a very similar distribution of recombination along the genome and that the two datasets can be combined to create more precise male meiotic recombination maps in sheep. Despite their similar recombination maps, we show that Soay and Lacaune males exhibit different heritabilities and QTL effects for inter-individual variation in genome-wide recombination rates. Data files are provided in Plink format ( https://www.cog-genomics.org/plink2 ).