cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14221999
title: Analysis software for StateSwitch dynamic (DataLad datasets)

description: These directories contain the code (and on gin the associated data; available upon request) for the (pre-)processing of the multimodal data of the StateSwitch study.



Please cite the following references if you use these scripts:






Kosciessa, J. Q., Lindenberger, U. & Garrett, D. D. Thalamocortical excitability modulation guides human perception under uncertainty. Nat. Commun. 12, 2430 (2021).







Kosciessa, J. Q., Mayr, U., Lindenberger, U. & Garrett, D. D. Broadscale dampening of uncertainty adjustment in the aging brain. Nat. Commun. (in press, 2024).


 



Note: The code and data are shared as nested DataLad datasets. These provide the most flexible and efficient access (recommended). The archive attached to this database record provides a snapshot in December 2024, please note that repositories may have been updated since then. The public copy is hosted on https://git.mpib-berlin.mpg.de/LNDG/stateswitchage/stsw and provides access to code and tools. The gin sibling (https://gin.g-node.org/StateSwitch/stsw) contains the annexed (pre-)processed data. These are available upon request from kosciessa@mpib-berlin.mpg.de.

Please note that content of subdatasets (i.e., subfolders) may be subject to alternative licenses.
DOI: 10.5281/zenodo.14222000
title: Analysis software for StateSwitch dynamic (DataLad datasets)

description: These directories contain the code (and on gin the associated data; available upon request) for the (pre-)processing of the multimodal data of the StateSwitch study.



Please cite the following references if you use these scripts:






Kosciessa, J. Q., Lindenberger, U. & Garrett, D. D. Thalamocortical excitability modulation guides human perception under uncertainty. Nat. Commun. 12, 2430 (2021).







Kosciessa, J. Q., Mayr, U., Lindenberger, U. & Garrett, D. D. Broadscale dampening of uncertainty adjustment in the aging brain. Nat. Commun. (in press, 2024).


 



Note: The code and data are shared as nested DataLad datasets. These provide the most flexible and efficient access (recommended). The archive attached to this database record provides a snapshot in December 2024, please note that repositories may have been updated since then. The public copy is hosted on https://git.mpib-berlin.mpg.de/LNDG/stateswitchage/stsw and provides access to code and tools. The gin sibling (https://gin.g-node.org/StateSwitch/stsw) contains the annexed (pre-)processed data. These are available upon request from kosciessa@mpib-berlin.mpg.de.

Please note that content of subdatasets (i.e., subfolders) may be subject to alternative licenses.
DOI: 10.48557/rnw2d3
title: Replication Data for "Powering a molecular delivery system by harvesting energy from the leaf motion in wind"

description: The raw data contained in this dataset support the manuscript titled "Powering a molecular delivery system by harvesting energy from the leaf motion in wind".
DOI: 10.15468/dl.3kavyt
title: Occurrence Download

description: A dataset listing the 1 species recorded in GBIF matching the query:
{
 "DatasetKey" : [
 "is Tomato French national collection"
 ]
}

 The dataset's 1 records were derived from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016839-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mxh264
title: Occurrence Download

description: A dataset containing 286 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hyporhamphus sajori (Temminck & Schlegel, 1846)",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 286 records from 26 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016858-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5284/1124895
title: Data from Historic Building Recording and Archaeological Monitoring at Redhill Barn, Blackawton, Devon, 2015

description: This digital archive contains images and site record data from a desk-based assessment, historic building recording, and archaeological monitoring conducted by South West Archaeology Ltd. (SWARCH) in March and June. The work was undertaken for a residential development at Redhill Barn, Blackawton, Devon.
DOI: 10.15468/dl.sdrt74
title: Occurrence Download

description: A dataset containing 812 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON((-5.752 37.359,-5.73 37.359,-5.73 37.38,-5.752 37.38,-5.752 37.359))"
 ]
}

 The dataset includes 812 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016861-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z5ptb7
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hemiramphus sajori Temminck & Schlegel, 1846",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016860-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7qahvt
title: Occurrence Download

description: A dataset containing 18758 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "Geometry POLYGON((-23.54592 24.9034,7.68736 24.9034,7.68736 47.12705,-23.54592 47.12705,-23.54592 24.9034))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Procambarus clarkii (Girard, 1852)"
 ]
}

 The dataset includes 18758 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016862-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y7jgqx
title: Occurrence Download

description: A dataset containing 510 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Evermannella balbo (Risso, 1820)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 510 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016863-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34847/nkl.400f2376
title: AGRINION - Stele fuenraria
title: Agrinion 100A

description: buono
description: numero di inventario
description: Source: Socal, Michela
description: Provenance: Dorsoduro 3484/D Venezia
description: Provenance: Italia
description: Provenance: Università Ca' Foscari
description: Provenance: Venezia
description: Provenance: primo piano
description: Provenance: 2.0
description: created: 1981-1985
DOI: 10.15468/dl.yqnd6r
title: Occurrence Download

description: A dataset containing 5660 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solanum mauritianum Scop.",
 "Country is South Africa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5660 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076323-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.96fg8f
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solanum mauritianum Scop.",
 "Country is Tonga",
 "HasCoordinate is true"
 ]
}

 The dataset includes 11 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076324-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.msjka9
title: Occurrence Download

description: A dataset containing 177 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solanum mauritianum Scop.",
 "Country is Uganda",
 "HasCoordinate is true"
 ]
}

 The dataset includes 177 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076325-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9cr7yj
title: Occurrence Download

description: A dataset containing 47 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solanum mauritianum Scop.",
 "Country is Zimbabwe",
 "HasCoordinate is true"
 ]
}

 The dataset includes 47 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076327-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15486331
title: Datasets for Manuscript "Corticonigral projections recruit substantia nigra pars lateralis dopaminergic neurons for auditory threat memories"
DOI: 10.5281/zenodo.15765858
title: Datasets for Manuscript "Corticonigral projections recruit substantia nigra pars lateralis dopaminergic neurons for auditory threat memories"
DOI: 10.15468/dl.qc6f6t
title: Occurrence Download

description: A dataset containing 70 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Poinciana regia Bojer ex Hook."
 ]
}

 The dataset includes 70 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076330-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3u4v9c
title: Occurrence Download

description: A dataset containing 1306 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lygodium microphyllum (Cav.) R.Br.",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1306 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076336-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m56br4
title: Occurrence Download

description: A dataset containing 534 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "Geometry POLYGON((112.8571 22.32545,114.01176 22.32545,114.01176 23.63331,112.8571 23.63331,112.8571 22.32545))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Platalea minor Temminck & Schlegel, 1849"
 ]
}

 The dataset includes 534 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076334-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s4sc32
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lygodium microphyllum (Cav.) R.Br.",
 "Country is Angola",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076335-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15765884
title: COVID-19-Hospitalisierungen in Deutschland

description: Im Datensatz 'COVID-19-Hospitalisierungen' werden die aktuellen Zahlen der nach den Vorgaben des Infektionsschutzgesetzes - IfSG - erfassten hospitalisierten COVID-19-Fälle bereitgestellt.
Um den Trend der Anzahl von Hospitalisierungen und der 7-Tage-Hospitalisierungsinzidenz besser bewerten zu können, wird die berichtete Hospitalisierungsinzidenz um eine Schätzung der zu erwartenden Anzahl an verzögert berichteten Hospitalisierungen ergänzt. Neben den Daten der gemeldeten COVID-19-Hospitalisierungen auf Bundes- und Länderebene wird daher ein Nowcasting der Anzahl hospitalisierter Fälle und der 7-Tage-Hospitalisierungsinzidenz auf Bundesebene durchgeführt. Ziel ist die Schätzung der Anzahl von hospitalisierten COVID-19-Fällen mit Meldedatum innerhalb der sieben vorhergehenden Tage - inklusive der noch nicht an das RKI berichteten Hospitalisierungen. Aufbauend auf dem Nowcasting wird eine Schätzung der adjustierten 7-Tage-Hospitalisierungsinzidenz durchgeführt.
DOI: 10.15468/dl.ugru93
title: Occurrence Download

description: A dataset containing 27 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anastrepha obliqua (Macquart, 1835)",
 "Country is Dominica",
 "HasCoordinate is true"
 ]
}

 The dataset includes 27 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076341-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6sr35y
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anastrepha obliqua (Macquart, 1835)",
 "Country is Antigua and Barbuda",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076339-250525065834625/datasets/export for details.
DOI: 10.34740/kaggle/dsv/12316660
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.daqsnp
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anastrepha obliqua (Macquart, 1835)",
 "Country is Barbados",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076340-250525065834625/datasets/export for details.
DOI: 10.15468/dl.tzupkk
title: Occurrence Download

description: A dataset listing the 22575 species recorded in GBIF matching the query:
{
 "and" : [
 "IucnRedListCategory is one of (CR, EN, VU)",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia"
 ]
}

 The dataset's 22575 records were derived from 14661 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0076321-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive8941.20251217.10
title: Corallococcus coralloides (Thaxter 1892) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive8942.20241212.9.2
title: Corallococcus coralloides (Thaxter 1892) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0076989.10fu
title: SH0076989.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive8942.20251217.10
title: Corallococcus coralloides (Thaxter 1892) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive8943.20241212.9.2
title: Corallococcus coralloides (Thaxter 1892) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0076990.10fu
title: SH0076990.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive8943.20251217.10
title: Corallococcus coralloides (Thaxter 1892) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0076991.10fu
title: SH0076991.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive8944.20241212.9.2
title: Corallococcus coralloides (Thaxter 1892) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive8944.20251217.10
title: Corallococcus coralloides (Thaxter 1892) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0076992.10fu
title: SH0076992.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive8945.20241212.9.2
title: Corallococcus coralloides (Thaxter 1892) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive8945.20251217.10
title: Corallococcus coralloides (Thaxter 1892) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0076993.10fu
title: SH0076993.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive8946.20241212.9.2
title: Corallococcus coralloides (Thaxter 1892) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive8946.20251217.10
title: Corallococcus coralloides (Thaxter 1892) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.