cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/w9kcc5hz8w.1
title: Iron isotopic perspective for the material flow from off-axis mantle plume to mid-ocean ridge system

description: Raw data for all figures in the manuscript by Zhang et al. to be published by Geochimica et Cosmochimica Acta as "Iron isotopic perspective for the material flow from off-axis mantle plume to mid-ocean ridge system".
DOI: 10.17632/8rrxrzrwpj.1
title: The Effect Of Single Dose Albendazole (400 Mg) Treatment On The Human Gut Microbiome Of Hookworm-Infected Ghanaian Individuals

description: Microbes play an important role in human gut homeostasis, metabolic, immunologic and physiopathology of the body. A longitudinal study conducted during 2018-2021 in the Kintampo North Municipality in Ghana demonstrated low hookworm infection cure rates following treatment with a single dose of 400 mg albendazole in some communities. To investigate associations between hookworm infection and the gut microbiome, we examined faecal samples from consented participants who were either cured or remained infected after treatment. At each time point, fecal samples were collected prior to and 10-14 days after albendazole treatment of those who were infected. We used 16S rRNA amplicon sequencing of DNA extracted from stool samples to investigate the composition and biodiversity of the gut microbiota and to identify potential microbial biomarkers associated with treatment outcomes. 
This dataset contains bacterial 16s gene sequence reads with primers and barcodes pre-trimed from the amplification of the V3-V4 hypervariable region, sequenced on the NovaSeq 6000 Illumina platform following standard Illumina sequencing protocols. 
Sample Key: 
Exxx -Extraction Negative controls 
G1xxxx - Successful albendazole treatment 
G2xxxx - Failed albendazole treatment 
G3xxxx - Successive Reinfection after albendazole treatment 
Nxx - No Infection Controls
DOI: 10.17632/8rrxrzrwpj.2
title: The Effect Of Single Dose Albendazole (400 Mg) Treatment On The Human Gut Microbiome Of Hookworm-Infected Ghanaian Individuals

description: Microbes play an important role in human gut homeostasis, metabolic, immunologic and physiopathology of the body. A longitudinal study conducted during 2018-2021 in the Kintampo North Municipality in Ghana demonstrated low hookworm infection cure rates following treatment with a single dose of 400 mg albendazole in some communities. To investigate associations between hookworm infection and the gut microbiome, we examined faecal samples from consented participants who were either cured or remained infected after treatment. At each time point, fecal samples were collected prior to and 10-14 days after albendazole treatment of those who were infected. We used 16S rRNA amplicon sequencing of DNA extracted from stool samples to investigate the composition and biodiversity of the gut microbiota and to identify potential microbial biomarkers associated with treatment outcomes. 
This dataset contains bacterial 16s gene sequence reads with primers and barcodes pre-trimed from the amplification of the V3-V4 hypervariable region, sequenced on the NovaSeq 6000 Illumina platform following standard Illumina sequencing protocols. 
Sample Key: 
Exxx -Extraction Negative controls 
G1xxxx - Successful albendazole treatment 
G2xxxx - Failed albendazole treatment 
G3xxxx - Successive Reinfection after albendazole treatment 
Nxx - No Infection Controls
DOI: 10.17632/sjpx7md7cf.1
title: Dataset of Instrumented Spinal Cord T1/T2-weighted MRI Scans

description: This dataset contains MRI scans of the instrumented spinal cord acquired using T1-weighted and T2-weighted MAVRIC SL sequences. The images were captured to assess spinal cord morphology and instrumentation-related artifacts.

For each dataset, spinal cord and vertebral label segmentations are provided in the T2-weighted image space. T1-weighted images were registered to the T2-weighted images to allow for accurate alignment and segmentation analysis.
DOI: 10.17632/67gf4gpz8n.2
title: Estimar afectaciones locativas por humedad y mohos

description: Se realizo traducción y validación de instrumento para estimar afectaciones locativas por humedad y mohos, se conto con expertos en areas relacionadas
DOI: 10.17632/52v3sh67b5.1
title: XRPD dataset of Arsenopyrite from Šumadija-Kopaonik ore district

description: Arsenopyrite is a common sulphide mineral in numerous polymetallic Pb-Zn-(±Cu, Ag, Au, Sb, Bi, W) mineralizations of the Šumadija-Kopaonik ore district, where significant and economically significant ore deposits are located, such as world-class Trepča deposit. The dataset is composed of experimental XRPD data recorded on powdered arsenopyrite of representative samples, showing variations in terms of unit cell dimensions, d(131) and composition, i.e. As:S ratio. The dataset is associated with a scientific article; DOI: XXXX.xXXX

The dataset is composed of "experimental" and "descriptive" data and is organised as follows: 
EXPERIMENTAL: a [A]; b [A]; c [A]; alpha [°]; beta [°]; V [A^3]; d(131) [2T]; followed by DESCRIPTION: location; spl ID; As : S at%(SEM); At% Fe (SEM); doping .at% (SEM); XRD at%As; mineral association; shape. form/zoning. The dataset is provided as a standard CSV file and as a TXT version. 

Methods
Arsenopyrite was analyzed by JEOL JSM–6610LV scanning electron microscope (SEM), equipped with an energy-dispersive spectrometer (EDS) of Oxford Instruments, model X-Max Large Area Analytical Silicon Drift Detector, connected with INCAEnergy 350 Microanalysis System. An acceleration voltage of 20 kV was used for the analyses. Before observation, the polished sections were sputtered by an nm-thick carbon layer to prevent charging. As this investigation aimed to check the elevated trace elements content in arsenopyrite, the composition of the minerals was only routinely checked by SEM-EDS, using internal standards of the Oxford Instruments software. The detection limit was ~0.1 wt.%. Simultaneously with this analysis, the homogeneity/zoning of the arsenopyrite crystals was investigated by backscattered electron images (BSE). The XRPD study of arsenopyrite from 4 samples shows only slight variations in terms of unit cell dimensions and composition, i.e. As:S ratio (Table 1). Considering that the calculated arsenic content is close to its theoretical value of 33.3 at.%, it can be said that the examined arsenopyrite from Dreanjak shows almost ideal stoichiometry. Otherwise, this ratio in arsenopyrite can vary significantly, as a result of which the As content ranges from less than 30 to 38.5 at.% (Kretschmar and Scott, 1976). The at.% As was calculated after the equation at.% As = 866.67 d131 – 1381.12 given by Kretschmar and Scott (1976).

References
Kretschmar , U. and Scott, S.D., 1976. Phase relations involving arsenopyrite in the system Fe-As-S and their application. Canadian Mineralogist 14, 364-386.
DOI: 10.17632/8gmj63vyx9.1
title: Tamura et al

description: These data for the paper by Tamura et al
This might be improved or we may add other data after the reviewer's suggestions.
DOI: 10.17632/mp2r3s6w74.1
title: Survey and Bibliometric Data on Blue Finance Research

description: This dataset comprises unprocessed data from pilot survey test results and bibliometric datasets sourced from the Web of Science and Scopus databases.
DOI: 10.17632/cfz827gggb.1
title: LDHU3_18.0660

description: XRP2-like protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/f362k8mtwf.1
title: HERITAGE CONSERVATION AND MODERNITY DATASET

description: The authenticity protection, commercialization and modern development in Wuzhen, China, have been in a state of development and change, and a process is needed to recognize them; The relevant data provide the basic information for choosing the media materials, carrying out content analysis, calculating the shop density, the classification of shop, commodity status & quality and controlled commercialization.
DOI: 10.17632/xhwnwzy7bf.1
title: LDHU3_18.0620

description: Tetratricopeptide repeat(TPR) containing protein; Leishmania donovani (HU3 strain)
DOI: 10.17632/9x8v346cnw.1
title: LDHU3_18.0690

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/546hsym93p.1
title: Geoengineering on Twitter

description: Raw Twitter interaction data without user annotations. Collected via Twitter's v2API and processed for the iScience, Cell Press paper: Conspiracy spillover and geoengineering.
DOI: 10.17632/7mshy2kcf3.1
title: Respiratory pressure and split flow data collection device with rapid expiratory shuttering

description: The venturi-based flow meter utilises split inspiratory and expiratory flow pathways, for greater configurability with additional respiratory monitoring or simulation devices, as well for ease of data processing. The venturi is designed to be integrated in series with respiratory circuitry, using standard 22mm male and female connections. In its current application the inspiratory input port (22mm male connection) is connected to a CPAP device using its accompanying circuitry (or is unconnected when CPAP is not required), the expiratory output port vents to atmosphere (22mm female connection), and the subject port (22mm male connection) is connected to a mouthpiece, filter, or mask. Differential Pressure Sensors were also upgraded (SSCDRRN001PD2A5) to capture larger flow ranges (seen in maximal breaths and panting).

Additionally, a modular expiratory shutter attachment is outlined for identification of passive respiratory mechanics. Specifically, the rapid expiratory shuttering allows for breath-wise identification of elastance and resistance during shutter instances. Thus, eliminating the issue of trade-off associated with the simultaneous fitting of elastance and resistance to expiratory profiles.

Ultimately, the device provides researchers with:

- Rapid expiratory occlusion for identification of passive lung mechanics 
- A low-cost alternative to commercial sensor systems 
- Individual inspiratory and expiratory flow pathways 
- Non-invasive data collection 
- A modular design with high customisability
DOI: 10.17632/bkddjg8n7s.1
title: LINF_350005200

description: Pyruvate kinase; Leishmania infantum (strain JPCM5)
DOI: 10.17632/zs4tp8grd9.1
title: LDHU3_18.0730

description: Peroxisomal enoyl-CoA hydratase; Leishmania donovani (HU3 strain)
DOI: 10.17632/556j99tcyt.1
title: LDHU3_18.0700

description: Vacuolar ATP synthase subunit c; Leishmania donovani (HU3 strain)
DOI: 10.17632/jh5bn42pm9.2
title: Data for: Chemical characterization of PM10 samples collected simultaneously at a rural and an urban site in the Caribbean coast: local and long-range source apportionment

description: Raw data for the article: Chemical characterization of PM10 samples collected simultaneously at a rural and an urban site in the Caribbean coast: local and long-range source apportionment.
This data was used to identify the main sources of PM10 in rural and urban environments in Cienfuegos, Cuba. Using this dataset, a source apportionment study employing PMF 5.0 coupled with the conditional bivariate probability function (CBPF) and concentration weighted trajectory (CWT) was performed as an integrated approach in order to evaluate the local and long-range (Sahara dust) contributions to PM10 for the first time in the studied region.
DOI: 10.17632/g88ymw27zp.1
title: LINF_350011000

description: Nup53/35/40-type RNA recognition motif containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/xrjrnjmydt.2
title: Comparison of oxygen induced retinopathy transcriptomes between Sprague Dawley rats from two vendors

description: We performed RNA sequencing on whole retinal lysates from Sprague Dawley rat pups from Charles River Laboratories and Envigo that underwent the Penn 50/10 oxygen-induced retinopathy (OIR) model or were room air (RA) controls. RA control and 50/10 OIR retinas underwent next-generation RNA sequencing, n=4/ group. Pairwise comparisons were performed to generate differentially expressed genes between OIR and control groups from the two vendors during the avascular phase of OIR (postnatal day 15) and the neovascular phase (postnatal day 20). 6 sheets included: 
1. P15 RA controls Envigo vs RA controls CRL (Envigos used as denominator, a.k.a CRL/Envigo)
2. P20 RA controls Envigo vs RA controls CRL (Envigos used as denominator, a.k.a CRL/Envigo)
3. P15 RA vs OIR CRL (RA= room air control. DEGs as OIR/RA)
4. P20 RA vs OIR CRL (DEGs as OIR/RA)
5. P15 RA vs OIR Envigo (DEGs as OIR/RA)
6. P20 RA vs OIR Envigo (DEGs as OIR/RA)
DOI: 10.17632/m4hhfk3tw7.1
title: Senescence of endplate osteoclasts induces sensory innervation and spinal pain

description: Spinal pain affects individuals of all ages and is the most common musculoskeletal problem globally. Its clinical management remains a challenge as the underlying mechanisms leading to it are still unclear. Here, we report that greater numbers of senescent osteoclasts (SnOCs) are observed in mouse models of spinal hypersensitivity, like lumbar spine instability (LSI) or aging, compared to controls. The larger population of SnOCs is associated with induced sensory nerve innervation, as well as the growth of H-type vessels, in the porous endplate. We show that deletion of senescent cells by administration of the senolytic drug Navitoclax (ABT263) results in significantly less spinal hypersensitivity, spinal degeneration, porosity of the endplate, sensory nerve innervation and H-type vessel growth in the endplate. We also show that there is greater SnOC-mediated secretion of Netrin-1 and NGF, two well-established sensory nerve growth factors, compared to non-senescent OCs. These findings suggest that pharmacological elimination of SnOCs may be a potent therapy to treat spinal pain.
DOI: 10.17632/vhn7cc9pny.2
title: OPIOID ABUSE RISK FACTORS-PHASE 1

description: Datos de la fase 1 del estudio 1 del proyecto PID2019-106086RB-I00
DOI: 10.17632/vhn7cc9pny.1
title: OPIOID ABUSE RISK FACTORS-STUDY 1

description: Datos de la fase 1 del estudio 1 del proyecto PID2019-106086RB-I00
DOI: 10.17632/546hsym93p.2
title: Geoengineering on Twitter

description: Raw Twitter interaction data without user annotations. Collected via Twitter's v2API and processed for the iScience, Cell Press paper: Conspiracy spillover and geoengineering.
DOI: 10.17632/khc4cn8ct9.1
title: Establishing a Cancer Registry and Baseline Data for Nyandarua County, Kenya: A Step towards Establishing a Central Cancer Registry

description: Cancer is a major global public health issue, causing a significant number of premature deaths worldwide. In 2020, the World Health Organization reported that more than 19 million individuals were diagnosed with cancer, and over 10 million lost their lives to the disease. Predictions indicate that cancer-related deaths will exceed 30 million by 2030, with around 75% occurring in low- and middle-income countries (LMICs) like Kenya. Various factors contribute to this concerning trend, including aging populations, a high prevalence of cancer risk factors, socioeconomic disparities resulting in limited healthcare access, and deficiencies in healthcare systems within LMICs. This study focused on Nyandarua County, Kenya, which lacks a dedicated cancer registry. Without comprehensive incidence data, the county faces challenges in developing targeted programs for cancer prevention, management, and control. The main objective of this investigation was to establish a cancer registry specific to Nyandarua County, capable of continuously gathering accurate cancer data, patient treatment follow-ups and disease outcomes. A demographic survey was conducted to determine the frequency of all-cause and specific cancers among patients who attended selected health facilities between 2013 and 2020. The presented data were collected from existing hospital records in three main hospitals in the county.
DOI: 10.17632/9s4z52pwwk.1
title: LINF_350011500

description: Tetratricopeptide repeat (TPR)-containing protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/dhbb5xhdvh.1
title: WTP for water service improvements in Puerto Rico (data)

description: This dataset contains the choice experiment data and sociodemographic information of respondents. The data was obtained through online interviews using Sawtooth Software. The objectives of this study were to estimate household WTP for ancillary water service improvements in Puerto Rico. Conditional logit and latent class models were used for the empirical analysis.
DOI: 10.17632/4t5mtrv49r.1
title: Raw data-Identification of a Macrophage Marker Gene Signature to Evaluate Immune Infiltration and Therapeutic Response in Hepatocellular Carcinoma

description: Raw data and processing code of Article "Identification of a Macrophage Marker Gene Signature to Evaluate Immune Infiltration and Therapeutic Response in Hepatocellular Carcinoma" .
DOI: 10.17632/t573phwyvh.1
title: LINF_350013600

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/kxmrcnwkpg.1
title: rTMS Modulation of Behavioral and Biological Measures in 3xTg-AD Mice

description: Abstract: Background/Objectives: The biological basis for behavioral manifestations of Alz-heimer’s disease remains unclear. Behavioral disinhibition, an overlooked manifestation of Alz-heimer’s disease, can result in substantial caregiver burden, and lacks effective management. This study expands upon previous work investigating disinhibited behavior in Alzheimer’s disease and a potential treatment of increasing brain-derived neurotrophic factor (BDNF) with rTMS. Methods: 47 3xTg-AD (Alzheimer’s) and 52 B6 (wildtype) mice were administered with ANA12 (an antagonist of TrkB receptor) or Vehicle (saline) and then rTMS or Sham treatment daily. After 14 days of treatments and injections, mouse behavior was assessed under various behavioral cognitive tests. Mice were then perfused, and brain samples were processed for histology and protein assays. Brain homogenates were analyzed for BDNF and its downstream signaling mol-ecules. Results: Open field testing demonstrated that 3xTg-AD mice traveled less total distance than B6 mice. 3xTg-AD-Sham mice injected with ANA12 were the only group to travel signifi-cantly less distance than B6-ANA12-Sham or B6-Vehicle-Sham mice (p&lt;0.05), while 3xTg-AD-rTMS mice (irrespective of injection) were not significantly different from any group, indicating some corrective influence from rTMS. 3xTg-AD mice had significantly greater meas-ured levels of BDNF and TrkB than the wild type mice. Conclusions: Treatment of Alzheimer’s disease using rTMS positively affects elements of disinhibition, but not all behavioral abnormali-ties. rTMS shifts 3xTg-AD open field behavioral test measures, eliminating and generating sig-nificant differences between untreated 3xTg-AD and B6 genotypes. Despite its benefit, further in-vestigation of rTMS as a treatment for Alzheimer’s disease as well as its biological underpin-nings are needed.
DOI: 10.17632/gbzcpm6kyh.1
title: LINF_350013000

description: NADH-dependent fumarate reductase; Leishmania infantum (strain JPCM5)
DOI: 10.17632/ts2ss9bg8x.1
title: LINF_350012600

description: Actin-related protein 4 | ARP4; Leishmania infantum (strain JPCM5)
DOI: 10.17632/2hjjfzx4pt.1
title: Data for paper "Progressive enrichment of REE between parent granites and weathering crust contributed to the generation of regolith‑hosted REE deposits"

description: The data include zircon U-Pb dating, whole-rocks major and trace elements and Nd isotopic compositions, and in-situ geochemical data of REE-phosphate, feldspar, biotite, Fe-Ti oxide, and apatite using in this paper.
DOI: 10.17632/tb6xfd7bh2.2
title: Data from: Mate copying requires the coincidence detector Rutabaga in the mushroom bodies of Drosophila melanogaster

description: Data used in the manuscript "Mate copying requires the coincidence detector Rutabaga in the mushroom bodies of Drosophila melanogaster"
DOI: 10.17632/2sp8fyvhfm.1
title: Aged PUF compression tests

description: These are raw data for 90 compression tests carried out in an aged vegetable-based polyurethane foam. All the data batches stored here are divided by the climate condition where the PUF was exposed. Batches 1-3 were exposed to 60°C and 90% RH; batches 4-6 to 75°C and 90% RH; batches 7-9 to 90°C and 90% RH. The foam was considered transversely isotropic, thus, each batch posses 10 different files, 5 for each direction.
DOI: 10.17632/yxc6zd9kgc.1
title: Data on saturation measurements of the Kisiljevo quartz

description: The file contains the original analysed data from the performed saturation test on the Kisiljevo LPS quartz
DOI: 10.17632/87g8rctss8.1
title: CH4 flux from different land uses in Argentina: natural grassland, pine afforestation and agricultural area.

description: This dataset contains values of soil methane flux (ng CH4 m-2 s-1) in four neighboring areas in a local ranch in the Argentinas Pampas (Tandil, Buenos Aires, Argentina; 37° 33´34.79 S; 59° 0.7´50.29´´ W). We studied an agricultural land (crop), a natural grassland area, and two pinus radiata afforestation with different tree densities. We use the static chamber technique to measure soil gas flux: 5 chambers per land use per measurement day. 12 measurement days were carried out between 2015 and 2019, covering all seasons. This data set also contains each chamber's average temperature (°C) and the atmospheric pressure (atm). This information was useful for determining the net soil CH4 flux of each surface and the effect of the human frontier between the natural land use and the agriculture or afforestation use, considering that the natural grassland is the baseline for this region.
DOI: 10.17632/pmc8fwxcv3.1
title: Photomechanical optical fiber images and analysis scripts

description: Images from photomechanical optical fiber experiments. The core of the fiber was PDMS doped with GNP. The cladding was either PTFE or FEP. There are some datasets from GNP-PDMS/Oil/FEP optical fibers, where the castor oil acts as a lubricant. Matlab and Python scripts are included for analysis.
DOI: 10.17632/mcwytf6hzt.1
title: LDHU3_10.1480

description: DnaJ domain-containing protein | JDP40 | J40; Leishmania donovani (HU3 strain)
DOI: 10.17632/6cmbnv4bdd.1
title: LDHU3_10.1610

description: Ras-related protein RabX1; Leishmania donovani (HU3 strain)
DOI: 10.17632/s32cbsn6cw.1
title: Crystal structure of a novel triose phosphate isomerase from shrimp

description: This data corresponds to the crystal structure of a new TIM (Triose Phosphate Isomerase E.C. 5.3.1.1) with significant similarity to a bacterial enzyme. The structure and structure factors will be deposited in the Protein Data Bank upon publication.
DOI: 10.17632/p5vb9376yb.1
title: LDHU3_10.1570

description: Mitoribosomal protein mS69; Leishmania donovani (HU3 strain)
DOI: 10.17632/prvmsst6sr.1
title: LDHU3_10.1580

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)