cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/2ebcb-zsq73
title: MP C1 27.5KX

description: Mycoplasma pneumonia C1 mutant
description: <strong>Tilt Series Date:</strong> 2010-01-01</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-01-27/rawdata/</p>10jan01b_B945b_038.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-01-27/rawdata/10jan01b_B945b_038.mrc"
        > <i class="download icon"></i> Download </a></p>

        10jan01b_B945b_038_full.rec,  Reconstruction (Pixel Size 1.548 nm), 419.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-01-27/3dimage_16459/10jan01b_B945b_038_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/e4jxa-p2k66
title: Vibrio cholerae

description: 11apr04a_
description: <strong>Tilt Series Date:</strong> 2011-04-04</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> 2740-80</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 0.0 eV/Å²,  defocus: 0.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
<strong>Collaborators and Roles:</strong> Mekalanos</p>
  mpa2011-04-04-10_slicer7262.jpg: Unknown membrane
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-04-04-10/rawdata/</p>11apr04a_VC8_018.mrc,  Tilt Series (Pixel Size 0.0 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-04-04-10/rawdata/11apr04a_VC8_018.mrc"
        > <i class="download icon"></i> Download </a></p>

        11apr04a_VC8_018_full.rec,  Reconstruction (Pixel Size 0.0 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2011-04-04-10/3dimage_34706/11apr04a_VC8_018_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.t26r9b
title: Occurrence Download

description: A dataset containing 88 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cairina moschata",
 "Country is Slovenia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 88 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005756-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/vsfv6-fwq45
title: M222R CheA inactive

description: Chemoreceptor mutant, receptors locked in an CheA inactive state
description: <strong>Tilt Series Date:</strong> 2011-11-28</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain and plasmid from Sandy Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB medium with Chloramphenicol overnight at 30 degrees, then lysed with Penicillin for an hour</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-11-28-64/rawdata/</p>strainM222Rday1_0011.mrc,  Tilt Series (Pixel Size 0.644 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-11-28-64/rawdata/strainM222Rday1_0011.mrc"
        > <i class="download icon"></i> Download </a></p>

        strainM222Rday1_0011_full.rec,  Reconstruction (Pixel Size 1.288 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-11-28-64/3dimage_15924/strainM222Rday1_0011_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/j6ke2-g4293
title: MP II3 27.5KX

description: Mycoplasma pneumonia II3 mutant, ok, not a cell
description: <strong>Tilt Series Date:</strong> 2009-10-15</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-10-15-18/rawdata/</p>09oct15a_Box169C_020.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-10-15-18/rawdata/09oct15a_Box169C_020.mrc"
        > <i class="download icon"></i> Download </a></p>

        09oct15a_Box169C_020_full.rec,  Reconstruction (Pixel Size 1.548 nm), 367.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-10-15-18/3dimage_16579/09oct15a_Box169C_020_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.qsym6g
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Aplocheilichthys lacustris, Lacustricola lacustris, Aplocheilichthys macrurus, Lacustricola macrurus, Aplocheilichthys maculatus, Lacustricola maculatus, Aplocheilichthys mediolateralis, Lacustricola mediolateralis, Aplocheilichthys nigrolateralis, Lacustricola nigrolateralis, Aplocheilichthys omoculatus, Lacustricola omoculatus, Aplocheilichthys rudolfianus, Micropanchax rudolfianus, Aplocheilichthys spilauchen, Aplocheilichthys usanguensis, Lacustricola usanguensis, Aplocheilichthys vitschumbaensis, Lacustricola vitschumbaensis, Aplocheilus panchax, Apricaphanius saourensis, Archiaphyosemion guineense, Aristochromis christyi, Arius africanus, Arius festinus, Arius gigas, Arius latiscutatus, Arius madagascariensis, Arius uncinatus, Arnoglossus imperialis, Arnoldichthys spilopterus, Asprotilapia leptura, Xenotilapia leptura, Astatoreochromis alluaudi, Astatoreochromis straeleni, Astatoreochromis vanderhorsti, Astatotilapia bloyeti, Astatotilapia burtoni, Astatotilapia calliptera, Astatotilapia desfontainii, Astatotilapia paludinosa, Haplochromis paludinosus, Astatotilapia stappersii, Astatotilapia tweddlei, Atherina boyeri, Atherina caspia, Atherinomorus duodecimalis, Atopochilus chabanaudi, Atopochilus christyi, Atopochilus macrocephalus, Atopochilus mandevillei, Atopochilus pachychilus, Atopochilus savorgnani, Atopochilus vogti, Atopodontus adriaensi, Auchenoglanis biscutatus, Auchenoglanis occidentalis, Aulonocara aquilonium, Aulonocara auditor, Aulonocara baenschi, Aulonocara brevinidus, Aulonocara brevirostre, Aulonocara ethelwynnae, Aulonocara gertrudae, Aulonocara guentheri, Aulonocara hueseri, Aulonocara jacobfreibergi, Aulonocara kandeense, Aulonocara kandeensis, Aulonocara koningsi, Aulonocara korneliae, Aulonocara maylandi, Aulonocara nyassae, Aulonocara rostratum, Aulonocara saulosi, Aulonocara stonemani, Aulonocara stuartgranti, Aulonocara trematocephalum, Aulonocranus dewindti, Aurigequula fasciata, Auriglobus modestus, Austroglanis barnardi, Austroglanis gilli, Austroglanis sclateri, Awaous aeneofuscus, Awaous bustamantei, Awaous commersoni, Awaous lateristriga, Awaous macrorhynchus, Bagrus bajad, Bagrus caeruleus, Bagrus degeni, Bagrus docmak, Bagrus filamentosus, Bagrus lubosicus, Bagrus meridionalis, Bagrus orientalis, Bagrus ubangensis, Bagrus urostigma)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((28.1382 11.0599,19.1382 11.0599,19.1382 2.0599,28.1382 2.0599,28.1382 11.0599))"
 ]
}

 The dataset includes 103 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005754-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/atexa-0j981
title: Acetonema longum

description: SpoIVA knockout attempt in A. longum Round1
description: <strong>Tilt Series Date:</strong> 2011-11-01</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Acetonema longum</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Matson grew the cells</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-11-01-20/3dimage_25297/</p>spo4ako0004_full.rec,  Reconstruction (Pixel Size 1.9 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-11-01-20/3dimage_25297/spo4ako0004_full.rec"
        > <i class="download icon"></i> Download </a></p>

        spo4ako0004.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-11-01-20/rawdata/spo4ako0004.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6h0d6-zss33
title: Parachlamydia acanthamoebae

description: Intact cells purified from amoeba cultures
description: <strong>Tilt Series Date:</strong> 2012-03-23</p>
<strong>Data Taken By:</strong> Martin Pilhofer</p>
<strong>Species / Specimen:</strong> Parachlamydia acanthamoebae</p>
<strong>Strain:</strong> UV-7</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Matthias Horn</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Purified</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2012-03-23-45/rawdata/</p>03232012_C20_5.mrc,  Tilt Series (Pixel Size 0.63 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2012-03-23-45/rawdata/03232012_C20_5.mrc"
        > <i class="download icon"></i> Download </a></p>

        03232012_C20_5_part122_19.rec,  Reconstruction (Pixel Size 1.25 nm), 1.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mpa2012-03-23-45/3dimage_31606/03232012_C20_5_part122_19.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/54962-hq779
title: Drp1

description: Drp1
description: <strong>Tilt Series Date:</strong> 2013-01-01</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Drp1</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> David Chan</p>
<strong>Purification / Growth Conditions / Treatment:</strong> purified</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-01-01-22/rawdata/</p>drp10013.mrc,  Tilt Series (Pixel Size 0.4 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-01-01-22/rawdata/drp10013.mrc"
        > <i class="download icon"></i> Download </a></p>

        13_2k_full.rec,  Reconstruction (Pixel Size 1.6 nm), 2.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-01-01-22/3dimage_57446/13_2k_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/n4vm0-dbs64
title: R. sphaeroides Cryosections

description: R. sphaeroides Cryosections strain 593
description: <strong>Tilt Series Date:</strong> 2013-10-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 44000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Judith Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-20/rawdata/</p>rhodosectionsatlas10023.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-20/rawdata/rhodosectionsatlas10023.mrc"
        > <i class="download icon"></i> Download </a></p>

        rhodosectionsatlas10023_part61_12.rec,  Reconstruction (Pixel Size 0.64 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-20/3dimage_33076/rhodosectionsatlas10023_part61_12.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/fa3nq-46a07
title: R. sphaeroides Cryosections

description: R. sphaeroides Cryosections strain 593
description: <strong>Tilt Series Date:</strong> 2013-10-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 44000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Judith Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-30/rawdata/</p>rhodosectionsatlas10033.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-30/rawdata/rhodosectionsatlas10033.mrc"
        > <i class="download icon"></i> Download </a></p>

        rhodosectionsatlas10033_full.rec,  Reconstruction (Pixel Size 0.64 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-30/3dimage_33100/rhodosectionsatlas10033_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/5z7kc-ftd46
title: MP PrkC 27.5KX

description: Mycoplasma pneumonia PrkC mutant, bad alignment
description: <strong>Tilt Series Date:</strong> 2010-01-02</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-02-17/rawdata/</p>10jan02b_B116a_018.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-02-17/rawdata/10jan02b_B116a_018.mrc"
        > <i class="download icon"></i> Download </a></p>

        10jan02b_B116a_018_full.rec,  Reconstruction (Pixel Size 1.548 nm), 419.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2010-01-02-17/3dimage_16905/10jan02b_B116a_018_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.57830/2307330
title: Pacific Island Network Early Detection of Invasive Plant Species Dataset 2022

description: The goal of the PACN early detection monitoring plan is to locate potentially invasive populations at early stages of invasion to inform park resource managers so that appropriate action (i.e., eradication, containment, additional monitoring) may be implemented. The primary objective: Identify and find non-native species that should be rapidly responded to and eradicated if possible. Steps towards meeting primary objective: 1) Survey dispersal corridors and other high-risk sites for incipient populations of potentially invasive plants. 2) Provide timely information to park managers regarding the presence of new and potentially invasive plant species in order to facilitate a rapid management response. 3) Update and maintain NPSpecies (https://irma.nps.gov/NPSpecies/), the plant species database for each park, including new species detected during field surveys. 4) Develop and distribute invasive plant outreach materials to park staff to increase awareness and reporting capability.
DOI: 10.22002/gw6py-qmk07
title: Haloferax gibbonsii

description: Haloferax gibbonsii
description: <strong>Tilt Series Date:</strong> 2014-06-05</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Haloferax gibbonsii</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 1600.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  aba2014-06-05-10_slicer4000.jpg: DNA?bundle in Haloferax gibbonsii
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-06-05-10/3dimage_43142/</p>Haloferax160eA0010_full.rec,  Reconstruction (Pixel Size 1.28 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-06-05-10/3dimage_43142/Haloferax160eA0010_full.rec"
        > <i class="download icon"></i> Download </a></p>

        Haloferax160eA0010.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-06-05-10/rawdata/Haloferax160eA0010.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/6b7bj-m9s15
title: B subtilis bMD208

description: (Ω) cat::Pxyl-gfp-mreB  ΔponA::kan 30 mM xyloseNotes from Mike Dion:clump mildly in liquid LB.  This can be easily disrupted by very mild vortexing, or growing them in the presence of 10 mM MgCl2.  The clumping is the result of their ponA deletionbMD208 and 210 are Graumann's strains that I just recently knocked ponA out of.  These strains have the mut1 variant of GFP that, in addition to mut1, is also L236P.  I determined this by sequencing both of Gruamann's strains.  Both of these grow very slow on LB agar (bMD208 grows worse than bMD210, on LB agar)
description: <strong>Tilt Series Date:</strong> 2013-12-04</p>
<strong>Data Taken By:</strong> Matt Swulius</p>
<strong>Species / Specimen:</strong> Bacillus subtilis</p>
<strong>Strain:</strong> bMD208</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Ethan Garner and Mike Dion</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-12-04-8/rawdata/</p>120413_bs208_30014.mrc,  Tilt Series (Pixel Size 0.42 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mst2013-12-04-8/rawdata/120413_bs208_30014.mrc"
        > <i class="download icon"></i> Download </a></p>

        120413_bs208_30014_part61_9.rec,  Reconstruction (Pixel Size 1.68 nm), 861.2 MB  
        
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