DOI: 10.57760/sciencedb.o00130.00334
title: Prevalence and clinical relevance of carbapenem-resistant bacteria in untreated hospital wastewater
title: 医院未处理污水中碳青霉烯类抗生素耐药细菌的流行情况和临床相关性分析

description: To analyze the prevalence, genomic characteristics and clinical relevance of carbapenem‑resistant bacteria in untreated hospital wastewater, and to provide a reference basis for in‑hospital assessment of public health situation and prevention of cross‑infection. In March 2023, untreated wastewater in the wastewater treatment station of the Second Affiliated Hospital of Soochow University and wastewater in the U‑shaped wastewater pipes of the hand‑washing sinks in 26 wards were collected, centrifuged and diluted, and the drug‑resistant bacteria were isolated by using LB solid plates containing meropenem (2 μg/ml) for species identification, drug sensitivity analysis, carbapenenase gene PCR detection and whole genome sequencing. The genome sequence was identified for drug resistance genes. Retrospective research was used, combining multilocus sequence typing (MLST) and single nucleotide polymorphism (SNP) analysis, to compare their homology with clinical isolates of the same quarter. The results showed that 56 carbapenem‑resistant gram‑negative bacteria were isolated from hospital wastewater, originating from 13 genera, of which 17 were isolated from the total hospital wastewater, with Aeromonas spp. as the most dominant genus (35.3%, 6/17), and 39 were isolated from the wastewater of 17 wards, with Pseudomonas spp. as the most dominant genus (30.8%, 12/39). All common wastewater isolates from our hospital were multidrug‑resistant bacteria, with up to 100% resistant to some second‑and third‑generation cephalosporins. A total of 8 carbapenemase genes originated from wastewater isolates, including blaKPC, blaNDM, blaIMP, blaVIM, blaIND, blaOXA‑58‑like, blaOXA‑48‑like, and blaOXA‑427‑like. 39 wastewater isolates carried the carbapenemase genes, and the total wastewater of the hospital carried the highest isolation rate of blaKPC‑2 bacteria (35.3%, 6/17) and the highest isolation rate of blaIMP‑8 bacteria (31.8%, 7/22) were found in the wastewater from 26 wards. 14 wastewater isolates were found to carry both carbapenemase genes, with a total of 6 combinations. A new blaIMP‑101 isoform was also identified for the first time. 4 wastewater isolates and 11 clinical isolates were screened for inclusion in the SNP analysis, in which only 15 SNPs differed between the two strains of ST11 Klebsiella pneumoniae of clinical and wastewater origin, which was highly homologous. In conclusion, the presence of multiple multi‑drug resistant conditionally pathogenic bacteria in untreated hospital wastewater has the potential risk of spreading drug‑resistant genes in the environment. The highly homologous Klebsiella pneumoniae isolated from hospital wastewater and clinics indicates the close association between hospital wastewater and clinical infections. Hospitals need to strengthen the monitoring of drug‑resistant bacteria and drug‑resistant genes in the wastewater environment, to prevent the widespread dissemination of drug‑resistant bacteria and drug‑resistant genes in hospital wastewater and to prevent nosocomial infections caused by drug‑resistant bacteria in wastewater
description: To analyze the prevalence, genomic characteristics and clinical relevance of carbapenem‑resistant bacteria in untreated hospital wastewater, and to provide a reference basis for in‑hospital assessment of public health situation and prevention of cross‑infection. In March 2023, untreated wastewater in the wastewater treatment station of the Second Affiliated Hospital of Soochow University and wastewater in the U‑shaped wastewater pipes of the hand‑washing sinks in 26 wards were collected, centrifuged and diluted, and the drug‑resistant bacteria were isolated by using LB solid plates containing meropenem (2 μg/ml) for species identification, drug sensitivity analysis, carbapenenase gene PCR detection and whole genome sequencing. The genome sequence was identified for drug resistance genes. Retrospective research was used, combining multilocus sequence typing (MLST) and single nucleotide polymorphism (SNP) analysis, to compare their homology with clinical isolates of the same quarter. The results showed that 56 carbapenem‑resistant gram‑negative bacteria were isolated from hospital wastewater, originating from 13 genera, of which 17 were isolated from the total hospital wastewater, with Aeromonas spp. as the most dominant genus (35.3%, 6/17), and 39 were isolated from the wastewater of 17 wards, with Pseudomonas spp. as the most dominant genus (30.8%, 12/39). All common wastewater isolates from our hospital were multidrug‑resistant bacteria, with up to 100% resistant to some second‑and third‑generation cephalosporins. A total of 8 carbapenemase genes originated from wastewater isolates, including blaKPC, blaNDM, blaIMP, blaVIM, blaIND, blaOXA‑58‑like, blaOXA‑48‑like, and blaOXA‑427‑like. 39 wastewater isolates carried the carbapenemase genes, and the total wastewater of the hospital carried the highest isolation rate of blaKPC‑2 bacteria (35.3%, 6/17) and the highest isolation rate of blaIMP‑8 bacteria (31.8%, 7/22) were found in the wastewater from 26 wards. 14 wastewater isolates were found to carry both carbapenemase genes, with a total of 6 combinations. A new blaIMP‑101 isoform was also identified for the first time. 4 wastewater isolates and 11 clinical isolates were screened for inclusion in the SNP analysis, in which only 15 SNPs differed between the two strains of ST11 Klebsiella pneumoniae of clinical and wastewater origin, which was highly homologous. In conclusion, the presence of multiple multi‑drug resistant conditionally pathogenic bacteria in untreated hospital wastewater has the potential risk of spreading drug‑resistant genes in the environment. The highly homologous Klebsiella pneumoniae isolated from hospital wastewater and clinics indicates the close association between hospital wastewater and clinical infections. Hospitals need to strengthen the monitoring of drug‑resistant bacteria and drug‑resistant genes in the wastewater environment, to prevent the widespread dissemination of drug‑resistant bacteria and drug‑resistant genes in hospital wastewater and to prevent nosocomial infections caused by drug‑resistant bacteria in wastewater