cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3554007
title: Supplement 1. WinBUGS code and comparison of estimates derived using Presence and WinBUGS.

description: File List code.txt (md5: c99dd7fbba34f43ff04b8341fcb83f05) Description We fit the model where colonization and extinction depended on -- IMAGE: Please see in attached file. -- in WinBUGS (code.txt) and compared parameter estimates and computation time between these approaches. The model was run with 3 chains for 20000 iterations, and inference was based on the last 10000 iterations. Parameter estimates and computation time (SE in parenthesis): -- TABLE: Please see in attached file. -- <br>
DOI: 10.6084/m9.figshare.3554004
title: Appendix A. Results of the goodness-of-fit tests for capture–recapture analysis.

description: Results of the goodness-of-fit tests for capture–recapture analysis.
DOI: 10.6084/m9.figshare.3554004.v1
title: Appendix A. Results of the goodness-of-fit tests for capture–recapture analysis.

description: Results of the goodness-of-fit tests for capture–recapture analysis.
DOI: 10.6084/m9.figshare.3554001
title: Appendix B. Comparison of capture–recapture models assuming or not an effect of sex on survival, recapture, or transition probabilities.

description: Comparison of capture–recapture models assuming or not an effect of sex on survival, recapture, or transition probabilities.
DOI: 10.6084/m9.figshare.3554001.v1
title: Appendix B. Comparison of capture–recapture models assuming or not an effect of sex on survival, recapture, or transition probabilities.

description: Comparison of capture–recapture models assuming or not an effect of sex on survival, recapture, or transition probabilities.
DOI: 10.6084/m9.figshare.3553998
title: Appendix C. Model selection for survival, recapture, or transition probabilities.

description: Model selection for survival, recapture, or transition probabilities.
DOI: 10.6084/m9.figshare.3553998.v1
title: Appendix C. Model selection for survival, recapture, or transition probabilities.

description: Model selection for survival, recapture, or transition probabilities.
DOI: 10.6084/m9.figshare.3553995
title: Appendix D. Comparison of capture–recapture models with different age structures for transition probabilities.

description: Comparison of capture–recapture models with different age structures for transition probabilities.
DOI: 10.6084/m9.figshare.3553995.v1
title: Appendix D. Comparison of capture–recapture models with different age structures for transition probabilities.

description: Comparison of capture–recapture models with different age structures for transition probabilities.
DOI: 10.6084/m9.figshare.3553992
title: Appendix E. Comparison of capture–recapture models with different age structures for survival probabilities.

description: Comparison of capture–recapture models with different age structures for survival probabilities.
DOI: 10.6084/m9.figshare.3553992.v1
title: Appendix E. Comparison of capture–recapture models with different age structures for survival probabilities.

description: Comparison of capture–recapture models with different age structures for survival probabilities.
DOI: 10.6084/m9.figshare.3553989
title: Appendix F. Details of comparisons among capture–recapture models with covariables (three-state models).

description: Details of comparisons among capture–recapture models with covariables (three-state models).
DOI: 10.6084/m9.figshare.3553989.v1
title: Appendix F. Details of comparisons among capture–recapture models with covariables (three-state models).

description: Details of comparisons among capture–recapture models with covariables (three-state models).
DOI: 10.6084/m9.figshare.3553986
title: Appendix G. Details of comparisons among final capture–recapture models (four-state models).

description: Details of comparisons among final capture–recapture models (four-state models).
DOI: 10.6084/m9.figshare.3553986.v1
title: Appendix G. Details of comparisons among final capture–recapture models (four-state models).

description: Details of comparisons among final capture–recapture models (four-state models).
DOI: 10.6084/m9.figshare.3553983
title: Appendix A. A table of mixed effects model output to examine how refuge use, predator risk cue, and individual variation influenced mussel consumption.

description: A table of mixed effects model output to examine how refuge use, predator risk cue, and individual variation influenced mussel consumption.
DOI: 10.6084/m9.figshare.3553983.v1
title: Appendix A. A table of mixed effects model output to examine how refuge use, predator risk cue, and individual variation influenced mussel consumption.

description: A table of mixed effects model output to examine how refuge use, predator risk cue, and individual variation influenced mussel consumption.
DOI: 10.6084/m9.figshare.3553980
title: Appendix A. Methodological technical details for fatty acids and flow cytometry analysis.

description: Methodological technical details for fatty acids and flow cytometry analysis.
DOI: 10.6084/m9.figshare.3553980.v1
title: Appendix A. Methodological technical details for fatty acids and flow cytometry analysis.

description: Methodological technical details for fatty acids and flow cytometry analysis.
DOI: 10.6084/m9.figshare.3553977
title: Appendix B. Detailed statistical results of the temporal variations analysis and the stepwise selection of the regression model.

description: Detailed statistical results of the temporal variations analysis and the stepwise selection of the regression model.
DOI: 10.6084/m9.figshare.3553977.v1
title: Appendix B. Detailed statistical results of the temporal variations analysis and the stepwise selection of the regression model.

description: Detailed statistical results of the temporal variations analysis and the stepwise selection of the regression model.
DOI: 10.6084/m9.figshare.3553974
title: Appendix A. Population-level variation in the percentage of iridoid glycosides, the proportion of young and old leaves damaged by chewing herbivores, and the severity of damage to those leaves.

description: Population-level variation in the percentage of iridoid glycosides, the proportion of young and old leaves damaged by chewing herbivores, and the severity of damage to those leaves.
DOI: 10.6084/m9.figshare.3553974.v1
title: Appendix A. Population-level variation in the percentage of iridoid glycosides, the proportion of young and old leaves damaged by chewing herbivores, and the severity of damage to those leaves.

description: Population-level variation in the percentage of iridoid glycosides, the proportion of young and old leaves damaged by chewing herbivores, and the severity of damage to those leaves.
DOI: 10.6084/m9.figshare.3553968
title: Appendix A. Experimental design and sampling.

description: Experimental design and sampling.
DOI: 10.6084/m9.figshare.3553965
title: Appendix B. Multivariate analyses and mixed-effects models.

description: Multivariate analyses and mixed-effects models.
DOI: 10.6084/m9.figshare.3553962
title: Appendix C. Supplementary results: herbivore assemblage analyses.

description: Supplementary results: herbivore assemblage analyses.
DOI: 10.6084/m9.figshare.3553959
title: Appendix D. Homogenization of the herbivore community under warmer temperatures.

description: Homogenization of the herbivore community under warmer temperatures.
DOI: 10.6084/m9.figshare.3553959.v1
title: Appendix D. Homogenization of the herbivore community under warmer temperatures.

description: Homogenization of the herbivore community under warmer temperatures.
DOI: 10.6084/m9.figshare.3553956
title: Appendix E. Changes in herbivore abundance and biomass through time in response to temperature and nitrogen addition.

description: Changes in herbivore abundance and biomass through time in response to temperature and nitrogen addition.
DOI: 10.6084/m9.figshare.3553956.v1
title: Appendix E. Changes in herbivore abundance and biomass through time in response to temperature and nitrogen addition.

description: Changes in herbivore abundance and biomass through time in response to temperature and nitrogen addition.
DOI: 10.6084/m9.figshare.3553950
title: Appendix F. Effect of temperature and nitrogen on herbivore phenology (i.e., three-way interaction between temperature, nitrogen, and time).

description: Effect of temperature and nitrogen on herbivore phenology (i.e., three-way interaction between temperature, nitrogen, and time).
DOI: 10.6084/m9.figshare.3553947
title: Appendix G. Changes in abundance of the three most common herbivore species through time and in response to temperature and nitrogen addition.

description: Changes in abundance of the three most common herbivore species through time and in response to temperature and nitrogen addition.
DOI: 10.6084/m9.figshare.3553947.v1
title: Appendix G. Changes in abundance of the three most common herbivore species through time and in response to temperature and nitrogen addition.

description: Changes in abundance of the three most common herbivore species through time and in response to temperature and nitrogen addition.
DOI: 10.6084/m9.figshare.3553944
title: Appendix H. Changes in herbivore individual body mass through time in response to temperature and nitrogen addition.

description: Changes in herbivore individual body mass through time in response to temperature and nitrogen addition.
DOI: 10.6084/m9.figshare.3553944.v1
title: Appendix H. Changes in herbivore individual body mass through time in response to temperature and nitrogen addition.

description: Changes in herbivore individual body mass through time in response to temperature and nitrogen addition.
DOI: 10.6084/m9.figshare.3553941
title: Appendix A. Table of phenotypic correlations among floral traits and added variable plots of selection gradients for floral traits.

description: Table of phenotypic correlations among floral traits and added variable plots of selection gradients for floral traits.
DOI: 10.6084/m9.figshare.3553941.v1
title: Appendix A. Table of phenotypic correlations among floral traits and added variable plots of selection gradients for floral traits.

description: Table of phenotypic correlations among floral traits and added variable plots of selection gradients for floral traits.
DOI: 10.6084/m9.figshare.3553938
title: Appendix A. Information pertaining to the bacterial and fungal isolates used in our study.

description: Information pertaining to the bacterial and fungal isolates used in our study.
DOI: 10.6084/m9.figshare.3553938.v1
title: Appendix A. Information pertaining to the bacterial and fungal isolates used in our study.

description: Information pertaining to the bacterial and fungal isolates used in our study.
DOI: 10.6084/m9.figshare.3553935
title: Appendix B. The relationships between population growth rates and respiration rates for a subset of the bacterial strains used in this study.

description: The relationships between population growth rates and respiration rates for a subset of the bacterial strains used in this study.
DOI: 10.6084/m9.figshare.3553935.v1
title: Appendix B. The relationships between population growth rates and respiration rates for a subset of the bacterial strains used in this study.

description: The relationships between population growth rates and respiration rates for a subset of the bacterial strains used in this study.
DOI: 10.6084/m9.figshare.3553932
title: Appendix A. A figure showing asymptotes reached at 250 grains counted for total pollen sums in both the uppermost sample and the sample at 12 cm depth.

description: A figure showing asymptotes reached at 250 grains counted for total pollen sums in both the uppermost sample and the sample at 12 cm depth.
DOI: 10.6084/m9.figshare.3553932.v1
title: Appendix A. A figure showing asymptotes reached at 250 grains counted for total pollen sums in both the uppermost sample and the sample at 12 cm depth.

description: A figure showing asymptotes reached at 250 grains counted for total pollen sums in both the uppermost sample and the sample at 12 cm depth.
DOI: 10.6084/m9.figshare.3553929
title: Appendix B. A table of radiometric ages upon which the chronology is based.

description: A table of radiometric ages upon which the chronology is based.
DOI: 10.6084/m9.figshare.3553929.v1
title: Appendix B. A table of radiometric ages upon which the chronology is based.

description: A table of radiometric ages upon which the chronology is based.
DOI: 10.6084/m9.figshare.3553926
title: Appendix C. Figures showing the inferred pattern of sediment accumulation in cores EJ-N-1 and EJ-2 raised from El Junco crater lake.

description: Figures showing the inferred pattern of sediment accumulation in cores EJ-N-1 and EJ-2 raised from El Junco crater lake.
DOI: 10.6084/m9.figshare.3553926.v1
title: Appendix C. Figures showing the inferred pattern of sediment accumulation in cores EJ-N-1 and EJ-2 raised from El Junco crater lake.

description: Figures showing the inferred pattern of sediment accumulation in cores EJ-N-1 and EJ-2 raised from El Junco crater lake.
DOI: 10.6084/m9.figshare.3553923
title: Appendix D. A table of corresponding age (AD/BC) for each of the depths sampled.

description: A table of corresponding age (AD/BC) for each of the depths sampled.
DOI: 10.6084/m9.figshare.3553923.v1
title: Appendix D. A table of corresponding age (AD/BC) for each of the depths sampled.

description: A table of corresponding age (AD/BC) for each of the depths sampled.
DOI: 10.6084/m9.figshare.3553920
title: Appendix E. The total number of taxa found in the El Junco crater lake pollen record, 105 pollen and spores types.

description: The total number of taxa found in the El Junco crater lake pollen record, 105 pollen and spores types.
DOI: 10.6084/m9.figshare.3553920.v1
title: Appendix E. The total number of taxa found in the El Junco crater lake pollen record, 105 pollen and spores types.

description: The total number of taxa found in the El Junco crater lake pollen record, 105 pollen and spores types.
DOI: 10.6084/m9.figshare.3553917
title: Appendix F. A figure showing ecological change derived from pollen data of El Junco crater lake in which selected times are set to zero to form a baseline with which change can be compared.

description: A figure showing ecological change derived from pollen data of El Junco crater lake in which selected times are set to zero to form a baseline with which change can be compared.
DOI: 10.6084/m9.figshare.3553917.v1
title: Appendix F. A figure showing ecological change derived from pollen data of El Junco crater lake in which selected times are set to zero to form a baseline with which change can be compared.

description: A figure showing ecological change derived from pollen data of El Junco crater lake in which selected times are set to zero to form a baseline with which change can be compared.
DOI: 10.6084/m9.figshare.3553914
title: Appendix A. Methodology used to identify the Tsuga decline in Fig. 1.

description: Methodology used to identify the Tsuga decline in Fig. 1.
DOI: 10.6084/m9.figshare.3553914.v1
title: Appendix A. Methodology used to identify the Tsuga decline in Fig. 1.

description: Methodology used to identify the Tsuga decline in Fig. 1.
DOI: 10.6084/m9.figshare.3553911
title: Appendix B. Radiocarbon dates.

description: Radiocarbon dates.
DOI: 10.6084/m9.figshare.3553908
title: Appendix C. Age–depth models.

description: Age–depth models.
DOI: 10.6084/m9.figshare.3553908.v1
title: Appendix C. Age–depth models.

description: Age–depth models.
DOI: 10.6084/m9.figshare.3553905
title: Appendix D. Identification of Tsuga decline at individual sites.

description: Identification of Tsuga decline at individual sites.
DOI: 10.6084/m9.figshare.3553905.v1
title: Appendix D. Identification of Tsuga decline at individual sites.

description: Identification of Tsuga decline at individual sites.
DOI: 10.6084/m9.figshare.3553902
title: Appendix E. Pollen percentage diagrams for study sites.

description: Pollen percentage diagrams for study sites.
DOI: 10.6084/m9.figshare.3553902.v1
title: Appendix E. Pollen percentage diagrams for study sites.

description: Pollen percentage diagrams for study sites.
DOI: 10.6084/m9.figshare.3553899
title: Appendix F. Pollen accumulation rate diagrams for study sites.

description: Pollen accumulation rate diagrams for study sites.
DOI: 10.6084/m9.figshare.3553899.v1
title: Appendix F. Pollen accumulation rate diagrams for study sites.

description: Pollen accumulation rate diagrams for study sites.
DOI: 10.6084/m9.figshare.3553896
title: Appendix G. Comparison of age-estimates for the Tsuga decline between study sites.

description: Comparison of age-estimates for the Tsuga decline between study sites.
DOI: 10.6084/m9.figshare.3553896.v1
title: Appendix G. Comparison of age-estimates for the Tsuga decline between study sites.

description: Comparison of age-estimates for the Tsuga decline between study sites.
DOI: 10.6084/m9.figshare.3553893
title: Appendix H. Comparison of timing of early Tsuga-decline events among sites.

description: Comparison of timing of early Tsuga-decline events among sites.
DOI: 10.6084/m9.figshare.3553893.v1
title: Appendix H. Comparison of timing of early Tsuga-decline events among sites.

description: Comparison of timing of early Tsuga-decline events among sites.
DOI: 10.6084/m9.figshare.3553890
title: Appendix I. Paleohydrological records from Irwin Smith Bog.

description: Paleohydrological records from Irwin Smith Bog.
DOI: 10.6084/m9.figshare.3553890.v1
title: Appendix I. Paleohydrological records from Irwin Smith Bog.

description: Paleohydrological records from Irwin Smith Bog.
DOI: 10.6084/m9.figshare.3553887
title: Appendix J. Comparison of age estimates between the Tsuga decline and the water table decline at Irwin Smith Bog.

description: Comparison of age estimates between the Tsuga decline and the water table decline at Irwin Smith Bog.
DOI: 10.6084/m9.figshare.3553887.v1
title: Appendix J. Comparison of age estimates between the Tsuga decline and the water table decline at Irwin Smith Bog.

description: Comparison of age estimates between the Tsuga decline and the water table decline at Irwin Smith Bog.
DOI: 10.6084/m9.figshare.3553884
title: Appendix A. Additional fire, model, and climate data.

description: Additional fire, model, and climate data.
DOI: 10.6084/m9.figshare.3553884.v1
title: Appendix A. Additional fire, model, and climate data.

description: Additional fire, model, and climate data.
DOI: 10.6084/m9.figshare.3553881
title: Appendix A. Site characteristics and experimental design for 15N tracer studies included in the meta-analysis.

description: Site characteristics and experimental design for 15N tracer studies included in the meta-analysis.
DOI: 10.6084/m9.figshare.3553878
title: Appendix A. Illustrations and details of the study system with a supporting figure and text.

description: Illustrations and details of the study system with a supporting figure and text.
DOI: 10.6084/m9.figshare.3553878.v1
title: Appendix A. Illustrations and details of the study system with a supporting figure and text.

description: Illustrations and details of the study system with a supporting figure and text.
DOI: 10.6084/m9.figshare.3553875
title: Appendix B. Posterior predictive diagnostic plots for the univariate models within path models A and B.

description: Posterior predictive diagnostic plots for the univariate models within path models A and B.
DOI: 10.6084/m9.figshare.3553872
title: Appendix C. Details of the d-sep procedure as applied to models A and B.

description: Details of the d-sep procedure as applied to models A and B.
DOI: 10.6084/m9.figshare.3553872.v1
title: Appendix C. Details of the d-sep procedure as applied to models A and B.

description: Details of the d-sep procedure as applied to models A and B.
DOI: 10.6084/m9.figshare.3553869
title: Appendix D. A table summarizing the posterior distributions for parameters of model B.

description: A table summarizing the posterior distributions for parameters of model B.
DOI: 10.6084/m9.figshare.3553869.v1
title: Appendix D. A table summarizing the posterior distributions for parameters of model B.

description: A table summarizing the posterior distributions for parameters of model B.
DOI: 10.6084/m9.figshare.3553863
title: Appendix A. A table with the percentages of landscape components where both raptor species coexist.

description: A table with the percentages of landscape components where both raptor species coexist.
DOI: 10.6084/m9.figshare.3553863.v1
title: Appendix A. A table with the percentages of landscape components where both raptor species coexist.

description: A table with the percentages of landscape components where both raptor species coexist.
DOI: 10.6084/m9.figshare.3553860
title: Appendix B. Model selection addressing occurrence of flying squirrel as function of landscape composition.

description: Model selection addressing occurrence of flying squirrel as function of landscape composition.
DOI: 10.6084/m9.figshare.3553860.v1
title: Appendix B. Model selection addressing occurrence of flying squirrel as function of landscape composition.

description: Model selection addressing occurrence of flying squirrel as function of landscape composition.
DOI: 10.6084/m9.figshare.3553857
title: Appendix C. Two tables with the outputs from modeling flying squirrel presence as function of competitive exclusion between raptors and as function of differences in predator community structure.

description: Two tables with the outputs from modeling flying squirrel presence as function of competitive exclusion between raptors and as function of differences in predator community structure.
DOI: 10.6084/m9.figshare.3553857.v1
title: Appendix C. Two tables with the outputs from modeling flying squirrel presence as function of competitive exclusion between raptors and as function of differences in predator community structure.

description: Two tables with the outputs from modeling flying squirrel presence as function of competitive exclusion between raptors and as function of differences in predator community structure.
DOI: 10.6084/m9.figshare.3553854
title: Appendix A. Additional data on rotifer behavior and physiology and a two-habitat model of autotroph–herbivore interaction.

description: Additional data on rotifer behavior and physiology and a two-habitat model of autotroph–herbivore interaction.
DOI: 10.6084/m9.figshare.3553854.v1
title: Appendix A. Additional data on rotifer behavior and physiology and a two-habitat model of autotroph–herbivore interaction.

description: Additional data on rotifer behavior and physiology and a two-habitat model of autotroph–herbivore interaction.
DOI: 10.6084/m9.figshare.3553851
title: Appendix A. Additional details of methods: seed source, determination of seeding rates, plot establishment and maintenance, and greenhouse test of the direct effects of bifenthrin.

description: Additional details of methods: seed source, determination of seeding rates, plot establishment and maintenance, and greenhouse test of the direct effects of bifenthrin.
DOI: 10.6084/m9.figshare.3553851.v1
title: Appendix A. Additional details of methods: seed source, determination of seeding rates, plot establishment and maintenance, and greenhouse test of the direct effects of bifenthrin.

description: Additional details of methods: seed source, determination of seeding rates, plot establishment and maintenance, and greenhouse test of the direct effects of bifenthrin.
DOI: 10.6084/m9.figshare.3553848
title: Appendix B. Results from Bayesian hierarchical model with uninformative priors.

description: Results from Bayesian hierarchical model with uninformative priors.
DOI: 10.6084/m9.figshare.3553848.v1
title: Appendix B. Results from Bayesian hierarchical model with uninformative priors.

description: Results from Bayesian hierarchical model with uninformative priors.
DOI: 10.6084/m9.figshare.3553845
title: Appendix C. Percent leaf damage on Cirsium vulgare.

description: Percent leaf damage on Cirsium vulgare.
DOI: 10.6084/m9.figshare.3553845.v1
title: Appendix C. Percent leaf damage on Cirsium vulgare.

description: Percent leaf damage on Cirsium vulgare.