cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7988690
title: Trend and Return Level of Extreme Snow Events in New York City

description: A major winter storm brought up to 42 inches of snow in parts of the Mid-Atlantic and Northeast states for January 22–24, 2016. The blizzard of January 2016 impacted about 102.8 million people, claiming at least 55 lives and $500 million to $3 billion in economic losses. This article studies two important aspects of extreme snowfall events: 1. trends in annual maxima and threshold exceedances and 2. return levels for extreme snowfall. Applying extreme value methods to the extreme snow data in the New York City area, we quantify linear trends in extreme snowfall and assess how severe the 2016 blizzard is in terms of return levels. To find a more realistic standard error for the extreme value methods, we extend Smith’s method to adapt to both spatial and temporal correlations in the snow data. Our results show increasing, but insignificant trends in the annual maximum snowfall series. However, we find that the 87.5th percentile snowfall has significantly increased by 0.564 inches per decade, suggesting that, while the maximum snowfall is not significantly increasing, there have been increases in the snowfall among the larger storms. We also find that the 2016 blizzard is indeed an extreme snow event equivalent to about a 40-year return level in the New York City area. The extreme value methods used in this study are thoroughly illustrated for general readers. Data and modularized programming codes are to be available online to aid practitioners in using extreme value methods in applications.
DOI: 10.6084/m9.figshare.7988690.v1
title: Trend and Return Level of Extreme Snow Events in New York City

description: A major winter storm brought up to 42 inches of snow in parts of the Mid-Atlantic and Northeast states for January 22–24, 2016. The blizzard of January 2016 impacted about 102.8 million people, claiming at least 55 lives and $500 million to $3 billion in economic losses. This article studies two important aspects of extreme snowfall events: 1. trends in annual maxima and threshold exceedances and 2. return levels for extreme snowfall. Applying extreme value methods to the extreme snow data in the New York City area, we quantify linear trends in extreme snowfall and assess how severe the 2016 blizzard is in terms of return levels. To find a more realistic standard error for the extreme value methods, we extend Smith’s method to adapt to both spatial and temporal correlations in the snow data. Our results show increasing, but insignificant trends in the annual maximum snowfall series. However, we find that the 87.5th percentile snowfall has significantly increased by 0.564 inches per decade, suggesting that, while the maximum snowfall is not significantly increasing, there have been increases in the snowfall among the larger storms. We also find that the 2016 blizzard is indeed an extreme snow event equivalent to about a 40-year return level in the New York City area. The extreme value methods used in this study are thoroughly illustrated for general readers. Data and modularized programming codes are to be available online to aid practitioners in using extreme value methods in applications.
DOI: 10.6084/m9.figshare.7990880.v2
title: mondial_data_without_rdf_schema

description: RDF triples about Mondial (without RDF schema)
DOI: 10.6084/m9.figshare.7988621
title: Gut microbiome gene catalog, 95% nucleotide identity

description: Non-redundant microbial gene catalog (clustered at 95% sequence identity) from 2,182 gut microbiome shotgun metagenomic samples.<br>This is one of two raw output files from CD-HIT. It is a fasta file containing the sequences of the consensus genes – the longest genes in each cluster – as well as their ID's. These ID's map back to the second CD-HIT output file, the cluster (extension: .clstr) file.<br>
DOI: 10.6084/m9.figshare.7988669
title: A New Analysis Strategy for Designs With Complex Aliasing

description: Nonregular designs are popular in planning industrial experiments for their run-size economy. These designs often produce partially aliased effects, where the effects of different factors cannot be completely separated from each other. In this article, we propose applying an adaptive lasso regression as an analytical tool for designs with complex aliasing. Its utility compared to traditional methods is demonstrated by analyzing real-life experimental data and simulation studies.
DOI: 10.6084/m9.figshare.7988795.v2
title: imdb_data_with_rdf_schema

description: RDF triples about IMDb (with RDF schema)
DOI: 10.6084/m9.figshare.7988621.v1
title: Gut microbiome gene catalog, 95% nucleotide identity

description: Non-redundant microbial gene catalog (clustered at 95% sequence identity) from 2,182 gut microbiome shotgun metagenomic samples.<br>This is one of two raw output files from CD-HIT. It is a fasta file containing the sequences of the consensus genes – the longest genes in each cluster – as well as their ID's. These ID's map back to the second CD-HIT output file, the cluster (extension: .clstr) file.<br>
DOI: 10.6084/m9.figshare.7990880.v3
title: mondial_data_without_rdf_schema

description: RDF triples about Mondial (without RDF schema) and inforank computed
DOI: 10.6084/m9.figshare.7988669.v2
title: A New Analysis Strategy for Designs With Complex Aliasing

description: Nonregular designs are popular in planning industrial experiments for their run-size economy. These designs often produce partially aliased effects, where the effects of different factors cannot be completely separated from each other. In this article, we propose applying an adaptive lasso regression as an analytical tool for designs with complex aliasing. Its utility compared to traditional methods is demonstrated by analyzing real-life experimental data and simulation studies.
DOI: 10.6084/m9.figshare.7990880.v5
title: mondial_data_without_rdf_schema

description: RDF triples about Mondial (without RDF schema) and inforank computed
DOI: 10.6084/m9.figshare.7988669.v1
title: A New Analysis Strategy for Designs with Complex Aliasing

description: Non-regular designs are popular in planning industrial experiments for their run-size economy. These designs often produce partially aliased effects, where the effects of different factors cannot be completely separated from each other. In this paper, we propose applying an adaptive lasso regression as an analytical tool for designs with complex aliasing. Its utility compared to traditional methods is demonstrated by analyzing real-life experimental data and simulation studies.
DOI: 10.6084/m9.figshare.7990880.v4
title: mondial_data_without_rdf_schema

description: RDF triples about Mondial (without RDF schema) and inforank computed
DOI: 10.6084/m9.figshare.7988543
title: Urban soundscapes in the historic centre of Thessaloniki: sonic architecture and sonic identity

description: This paper shows that contemporary sound in urban areas consists of a fragile equilibrium of sonic territories with high heterogeneity. Sound scenes in urban environments are studied using ecological sound tools, including soundscape ecology and acoustic ecology. This study proposes an interdisciplinary framework that combines quantitative and qualitative sonic and architectural data to analyse, describe and design sonic space. Five territories with distinctive sonic identities in the historic centre of Thessaloniki in Greece were selected and compared with their architectural characteristics. Though these characteristics of Thessaloniki are similar to other cities of Greece, the continuing transformation of urban sonic identities lends importance to this research. The analysis revealed unique information about the identity and urbanity of the territories, challenging the established noise–silence dichotomy and opening up new perspectives on an integrated sustainable urban design.
DOI: 10.6084/m9.figshare.7988543.v1
title: Urban soundscapes in the historic centre of Thessaloniki: sonic architecture and sonic identity

description: This paper shows that contemporary sound in urban areas consists of a fragile equilibrium of sonic territories with high heterogeneity. Sound scenes in urban environments are studied using ecological sound tools, including soundscape ecology and acoustic ecology. This study proposes an interdisciplinary framework that combines quantitative and qualitative sonic and architectural data to analyse, describe and design sonic space. Five territories with distinctive sonic identities in the historic centre of Thessaloniki in Greece were selected and compared with their architectural characteristics. Though these characteristics of Thessaloniki are similar to other cities of Greece, the continuing transformation of urban sonic identities lends importance to this research. The analysis revealed unique information about the identity and urbanity of the territories, challenging the established noise–silence dichotomy and opening up new perspectives on an integrated sustainable urban design.
DOI: 10.6084/m9.figshare.12873374
title: Additional file 2 of An untargeted multi-technique metabolomics approach to studying intracellular metabolites of HepG2 cells exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin

description: Additional file 2:Metadata and NMR raw data: ZIP file containing: -All NMR raw data (in JCAMP-DX format ".dx") -The metadata on NMR (polars & apolars), LC-MS and GC-MS data sets (as Tab delimited files ".txt"). (ZIP 10 MB)
DOI: 10.6084/m9.figshare.12873398.v2
title: Additional file of An untargeted multi-technique metabolomics approach to studying intracellular metabolites of HepG2 cells exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin

description: Additional file of An untargeted multi-technique metabolomics approach to studying intracellular metabolites of HepG2 cells exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin
DOI: 10.6084/m9.figshare.12873374.v1
title: Additional file 2 of An untargeted multi-technique metabolomics approach to studying intracellular metabolites of HepG2 cells exposed to 2,3,7,8-tetrachlorodibenzo-p-dioxin

description: Additional file 2:Metadata and NMR raw data: ZIP file containing: -All NMR raw data (in JCAMP-DX format ".dx") -The metadata on NMR (polars & apolars), LC-MS and GC-MS data sets (as Tab delimited files ".txt"). (ZIP 10 MB)
DOI: 10.6084/m9.figshare.7988306
title: Application of high-sensitivity flow cytometry in combination with low-voltage scanning electron microscopy for characterization of nanosized objects during platelet concentrate storage

description: Platelet concentrates are used in clinic for therapy and prophylaxis of conditions associated with platelet deficiency or malfunction. The characteristics of platelet concentrates gradually change during pretransfusion storage, affecting their clinical effectiveness and the risk of adverse transfusion reactions. The presence of platelet-derived membrane vesicles is an important characteristic of platelet concentrates. Due to their functionality, changes in the number and molecular compositions of platelet-derived vesicles have major effects on the clinical properties of platelet preparations. The existence of different subpopulations of membrane vesicles requires analytical methods capable of providing information at the individual vesicle level. Such methods include flow cytometry and electron microscopy. However, conventional flow cytometry has certain limitations, since the diameters of many platelet-derived membrane vesicles are smaller than its detection limit. The use of classical scanning electron microscopy is also limited due to the requirement for coating with a layer of conductive material, which impedes the detection of small extracellular vesicles. Here, a combination of high-sensitivity flow cytometry and low-voltage scanning electron microscopy was used to increase sensitivity and resolution in the detection of nanosized objects present in platelet concentrates during storage. Apheresis platelet concentrates from eight healthy adult donors were investigated on days 2 and 7 of storage. Fractions of nanosized objects were obtained by differential centrifugation. Fluorophore-conjugated antibodies were used to detect marker-positive vesicles derived from platelets (CD41), red blood cells (CD235a), leukocytes (CD45), and endothelial cells (VEGFR2). Near-spherical objects with diameters ranging from 25 to 700 nm were observed by low-voltage scanning electron microscopy in platelet concentrates and its fractions. On day 7 of storage, objects with diameters of less than 100 nm were attached to and clustered near the terminal ends of pseudopod-like projections. High-sensitivity flow cytometry showed that during storage numbers of CD41(pos) vesicles elevated more than fivefold and numbers of marker-negative nanosized objects, which did not carry any of the investigated cell type-specific markers elevated more than twofold. Major changes in both CD41(pos) vesicles and marker-negative nanosized objects abundances were observed for objects with diameters around 100 nm bead equivalents. Overall, these results emphasized the importance of application of high-sensitivity methods for monitoring the characteristics of cell-derived nanosized objects during platelet concentrate storage.
DOI: 10.6084/m9.figshare.7988306.v1
title: Application of high-sensitivity flow cytometry in combination with low-voltage scanning electron microscopy for characterization of nanosized objects during platelet concentrate storage

description: Platelet concentrates are used in clinic for therapy and prophylaxis of conditions associated with platelet deficiency or malfunction. The characteristics of platelet concentrates gradually change during pretransfusion storage, affecting their clinical effectiveness and the risk of adverse transfusion reactions. The presence of platelet-derived membrane vesicles is an important characteristic of platelet concentrates. Due to their functionality, changes in the number and molecular compositions of platelet-derived vesicles have major effects on the clinical properties of platelet preparations. The existence of different subpopulations of membrane vesicles requires analytical methods capable of providing information at the individual vesicle level. Such methods include flow cytometry and electron microscopy. However, conventional flow cytometry has certain limitations, since the diameters of many platelet-derived membrane vesicles are smaller than its detection limit. The use of classical scanning electron microscopy is also limited due to the requirement for coating with a layer of conductive material, which impedes the detection of small extracellular vesicles. Here, a combination of high-sensitivity flow cytometry and low-voltage scanning electron microscopy was used to increase sensitivity and resolution in the detection of nanosized objects present in platelet concentrates during storage. Apheresis platelet concentrates from eight healthy adult donors were investigated on days 2 and 7 of storage. Fractions of nanosized objects were obtained by differential centrifugation. Fluorophore-conjugated antibodies were used to detect marker-positive vesicles derived from platelets (CD41), red blood cells (CD235a), leukocytes (CD45), and endothelial cells (VEGFR2). Near-spherical objects with diameters ranging from 25 to 700 nm were observed by low-voltage scanning electron microscopy in platelet concentrates and its fractions. On day 7 of storage, objects with diameters of less than 100 nm were attached to and clustered near the terminal ends of pseudopod-like projections. High-sensitivity flow cytometry showed that during storage numbers of CD41(pos) vesicles elevated more than fivefold and numbers of marker-negative nanosized objects, which did not carry any of the investigated cell type-specific markers elevated more than twofold. Major changes in both CD41(pos) vesicles and marker-negative nanosized objects abundances were observed for objects with diameters around 100 nm bead equivalents. Overall, these results emphasized the importance of application of high-sensitivity methods for monitoring the characteristics of cell-derived nanosized objects during platelet concentrate storage.
DOI: 10.6084/m9.figshare.7988138
title: Gender and hometown population density interact to predict face recognition ability

description: This dataset comes from work investigating how hometown size relates to face recognition ability using several measures. Accompanying manuscript is available upon request (currently in submission).
DOI: 10.6084/m9.figshare.7988147
title: _dataset

description: Question Answer Dataset
DOI: 10.6084/m9.figshare.7988201
title: mapping-mesothelioma.ipynb

description: python notebook of data preparation, analysis, and visualisation of regional mesothelioma mortality time series data<br>
DOI: 10.6084/m9.figshare.7988138.v1
title: Gender and hometown population density interact to predict face recognition ability

description: This dataset comes from work investigating how hometown size relates to face recognition ability using several measures. Accompanying manuscript is available upon request (currently in submission).
DOI: 10.6084/m9.figshare.7988201.v1
title: mapping-mesothelioma.ipynb

description: python notebook of data preparation, analysis, and visualisation of regional mesothelioma mortality time series data<br>
DOI: 10.6084/m9.figshare.7987874
title: Subjective Evaluation of a Passive Industrial Exoskeleton for Lower-back Support: A Field Study in the Automotive Sector

description: A passive, low-back support exoskeleton (Laevo) was tested in a four-week field study with workers in several automobile manufacturing workplaces that included both static trunk postures (forward bending) and dynamic repositioning (manual material handling). The aims of the study were to obtain subjective evaluations of the impacts of exoskeleton use, including discomfort, usability, and user acceptance. Workers overall reported a decrease in physical discomfort in the lower back when using the passive exoskeleton, although this decrease was only evident in work requiring static vs. dynamic postures. There was also evidence of a load redistribution, specifically to the chest region, as evidenced by increase wearing discomfort. Workers provided moderate-to-high ratings of perceived usability, though these ratings were lower at the end of the field study, and a similar outcome was found regarding user acceptance (“intention-to-use”) of the exoskeleton. User acceptance was strongly influenced by perceived usability, as well as the level of discomfort experienced when using the exoskeleton.
DOI: 10.6084/m9.figshare.12873455.v10
title: Additional file of Transcriptomic, proteomic and metabolomic analysis of UV-B signaling in maize

description: Additional file of Transcriptomic, proteomic and metabolomic analysis of UV-B signaling in maize
DOI: 10.6084/m9.figshare.12873428
title: Additional file 2 of Transcriptomic, proteomic and metabolomic analysis of UV-B signaling in maize

description: Additional file 2:Supplemental Tables. (XLS 6 MB)
DOI: 10.6084/m9.figshare.12873428.v1
title: Additional file 2 of Transcriptomic, proteomic and metabolomic analysis of UV-B signaling in maize

description: Additional file 2:Supplemental Tables. (XLS 6 MB)
DOI: 10.6084/m9.figshare.7987874.v1
title: Subjective Evaluation of a Passive Industrial Exoskeleton for Lower-back Support: A Field Study in the Automotive Sector

description: A passive, low-back support exoskeleton (Laevo) was tested in a four-week field study with workers in several automobile manufacturing workplaces that included both static trunk postures (forward bending) and dynamic repositioning (manual material handling). The aims of the study were to obtain subjective evaluations of the impacts of exoskeleton use, including discomfort, usability, and user acceptance. Workers overall reported a decrease in physical discomfort in the lower back when using the passive exoskeleton, although this decrease was only evident in work requiring static vs. dynamic postures. There was also evidence of a load redistribution, specifically to the chest region, as evidenced by increase wearing discomfort. Workers provided moderate-to-high ratings of perceived usability, though these ratings were lower at the end of the field study, and a similar outcome was found regarding user acceptance (“intention-to-use”) of the exoskeleton. User acceptance was strongly influenced by perceived usability, as well as the level of discomfort experienced when using the exoskeleton.
DOI: 10.25345/c55b3n
title: MassIVE MSV000086026 - MassIVE_A_RP_LC_MS_MS identification of features on selected samples
title: Sillner et al. : Longitudinal profiles of dietary and microbial metabolites in formula- and breastfed infants - https://doi.org/10.1101/2020.05.11.086546 Identification of RP LC-MS features of Figure 1 on selected fecal samples from infants
DOI: 10.6084/m9.figshare.12873506.v1
title: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

description: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)
DOI: 10.6084/m9.figshare.12873506.v9
title: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

description: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)
DOI: 10.6084/m9.figshare.12873506.v12
title: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

description: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)
DOI: 10.6084/m9.figshare.12873506.v10
title: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

description: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)
DOI: 10.6084/m9.figshare.12873506.v11
title: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

description: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)
DOI: 10.6084/m9.figshare.12873506.v8
title: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

description: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)
DOI: 10.6084/m9.figshare.12873506.v7
title: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

description: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)
DOI: 10.6084/m9.figshare.12873506.v15
title: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

description: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)
DOI: 10.6084/m9.figshare.12873506.v13
title: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

description: Additional file of Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)