cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15373556
title: MINKE Task 9.3 Metadata description for  Deliverable 9.3. Enhancement of traceability of fluorometer calibration

description: This document contains metadata description for MINKE Task 9.3 and deliverable 9.3. “Enhancement of traceability of fluorometer calibration”1 . As most of the data is collected in laboratory during experiments, and often using sophisticated experimental setups or specific instruments, the standard oceanographic metadata vocabularies are not suitable to describe the metadata. Then, for each dataset, a separate short description is given in this document.

 

1Seppälä, J., Pensieri, S., Bozzano, R., Frangoulis, C., Tsakalakis, I., Sorensen, K., Valestrand, L., King, A., Salaün, J., Laloux, M., Maunula, P., Haavisto, N., Lescroart, E., Ylöstalo, P., & Pipinis Troupakis, M. (2024). Enhancement of traceability of fluorometer calibration. Zenodo. https://doi.org/10.5281/zenodo.14770435
DOI: 10.5281/zenodo.15373557
title: MINKE Task 9.3 Metadata description for  Deliverable 9.3. Enhancement of traceability of fluorometer calibration

description: This document contains metadata description for MINKE Task 9.3 and deliverable 9.3. “Enhancement of traceability of fluorometer calibration”1 . As most of the data is collected in laboratory during experiments, and often using sophisticated experimental setups or specific instruments, the standard oceanographic metadata vocabularies are not suitable to describe the metadata. Then, for each dataset, a separate short description is given in this document.

 

1Seppälä, J., Pensieri, S., Bozzano, R., Frangoulis, C., Tsakalakis, I., Sorensen, K., Valestrand, L., King, A., Salaün, J., Laloux, M., Maunula, P., Haavisto, N., Lescroart, E., Ylöstalo, P., & Pipinis Troupakis, M. (2024). Enhancement of traceability of fluorometer calibration. Zenodo. https://doi.org/10.5281/zenodo.14770435
DOI: 10.5281/zenodo.15782882
title: GD 10_14 AVANT WP2

description: Tab in excel- Data kind
study title
study description


feed composition
Effect of dietary High Molecular Weight Chitosan Supplementation on Weaned Piglets Challenged by Enterotoxigenic Haemolytic Escherichia coli
Provision of scientific information on the efficacy of potential of chitosan on reducing post-weaning diarrhoea and supporting gut health and functionality in young piglets.


temp and humidity
Effect of dietary High Molecular Weight Chitosan Supplementation on Weaned Piglets Challenged by Enterotoxigenic Haemolytic Escherichia coli
Provision of scientific information on the efficacy of potential of chitosan on reducing post-weaning diarrhoea and supporting gut health and functionality in young piglets.


Zootech
Effect of dietary High Molecular Weight Chitosan Supplementation on Weaned Piglets Challenged by Enterotoxigenic Haemolytic Escherichia coli
Provision of scientific information on the efficacy of potential of chitosan on reducing post-weaning diarrhoea and supporting gut health and functionality in young piglets.


Shedding
Effect of dietary High Molecular Weight Chitosan Supplementation on Weaned Piglets Challenged by Enterotoxigenic Haemolytic Escherichia coli
Provision of scientific information on the efficacy of potential of chitosan on reducing post-weaning diarrhoea and supporting gut health and functionality in young piglets.


Literature search
DOI: 10.5281/zenodo.15782883
title: GD 10_14 AVANT WP2

description: Tab in excel- Data kind
study title
study description


feed composition
Effect of dietary High Molecular Weight Chitosan Supplementation on Weaned Piglets Challenged by Enterotoxigenic Haemolytic Escherichia coli
Provision of scientific information on the efficacy of potential of chitosan on reducing post-weaning diarrhoea and supporting gut health and functionality in young piglets.


temp and humidity
Effect of dietary High Molecular Weight Chitosan Supplementation on Weaned Piglets Challenged by Enterotoxigenic Haemolytic Escherichia coli
Provision of scientific information on the efficacy of potential of chitosan on reducing post-weaning diarrhoea and supporting gut health and functionality in young piglets.


Zootech
Effect of dietary High Molecular Weight Chitosan Supplementation on Weaned Piglets Challenged by Enterotoxigenic Haemolytic Escherichia coli
Provision of scientific information on the efficacy of potential of chitosan on reducing post-weaning diarrhoea and supporting gut health and functionality in young piglets.


Shedding
Effect of dietary High Molecular Weight Chitosan Supplementation on Weaned Piglets Challenged by Enterotoxigenic Haemolytic Escherichia coli
Provision of scientific information on the efficacy of potential of chitosan on reducing post-weaning diarrhoea and supporting gut health and functionality in young piglets.


Literature search
DOI: 10.15468/dl.cagabx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Orconectes limosus (Rafinesque, 1817)",
 "Country is Italy",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084234-250525065834625/datasets/export for details.
DOI: 10.15468/dl.g9t8wn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Orconectes limosus (Rafinesque, 1817)",
 "Country is Latvia",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084235-250525065834625/datasets/export for details.
DOI: 10.15468/dl.c4ujnu
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Orconectes limosus (Rafinesque, 1817)",
 "Country is Lithuania",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084236-250525065834625/datasets/export for details.
DOI: 10.48323/70p7e-jb126
title: MS_XevoTQXS_2025_May

description: Acqity Premier + Xevo TQXS    RLI03AAAMP03ADRLI04AB
DOI: 10.48323/vhq85-sbq21
title: MS_XevoTQXS_2025_May

description: Acqity Premier + Xevo TQXS    RLI03AAAMP03ADRLI04AB
DOI: 10.34810/data372
title: PANACEA Labour and Parole merged Italian Lexicon

description: The Italian PAROLE_lab_merged.lmf.xml is SCF lexicon obtained by merging two automatically extracted lexicons: a domain lexicon (labour) pANACEA_SCF_IT_labour.lmf.xml and a the SCFs Italian lexicon PAROLE_lmf_subcat_ita.lmf.xml, generated from PAROLE SIMPLE Lexicon The lexicon was produced at CNR-ILC, Pisa, Italy as an outcome of the PANACEA EU-FP7 Funded Project under Grant Agreement 248064 (http://www.panacea-lr.eu).
DOI: 10.5281/zenodo.11108965
title: Navigating Past Oceans: Comparing Metabarcoding and Metagenomics of Marine Ancient Sediment Environmental DNA

description: Release of code and data associated with doi.org/10.1111/1755-0998.14086.Navigating Past Oceans: Comparing Metabarcoding and Metagenomics of Marine Ancient Sediment Environmental DNAHolman LE, Zampirolo G, Gyllencreutz R, Scourse J, Frøslev T, Carøe C, Gopalakrishnan S, Pedersen MW, Bohmann K (2025)Published in Molecular Ecology Resources
DOI: 10.5281/zenodo.15782878
title: Navigating Past Oceans: Comparing Metabarcoding and Metagenomics of Marine Ancient Sediment Environmental DNA

description: Release of code and data associated with doi.org/10.1111/1755-0998.14086.Navigating Past Oceans: Comparing Metabarcoding and Metagenomics of Marine Ancient Sediment Environmental DNAHolman LE, Zampirolo G, Gyllencreutz R, Scourse J, Frøslev T, Carøe C, Gopalakrishnan S, Pedersen MW, Bohmann K (2025)Published in Molecular Ecology Resources
DOI: 10.5281/zenodo.15779045
title: The Impact of the 10 December 2023 ICME Event on Martian Space Environment and Ion Escape Processes: A Multi-fluid Hall-MHD Study
DOI: 10.5281/zenodo.15782910
title: The Impact of the 10 December 2023 ICME Event on Martian Space Environment and Ion Escape Processes: A Multi-fluid Hall-MHD Study
DOI: 10.3535/e0h-rf8-z1j
title: Clanga clanga

description: Digital Specimen for the physical specimen hosted at Natural History Museum of Denmark.
DOI: 10.15468/dl.mj3wh7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Orconectes limosus (Rafinesque, 1817)",
 "Country is Romania",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084239-250525065834625/datasets/export for details.
DOI: 10.3535/z8z-nke-lwj
title: Clanga clanga

description: Digital Specimen for the physical specimen hosted at Natural History Museum of Denmark.
DOI: 10.15468/dl.aa4war
title: Occurrence Download

description: A dataset containing 29 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Orconectes limosus (Rafinesque, 1817)",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 29 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084241-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5knadu
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Orconectes limosus (Rafinesque, 1817)",
 "Country is Switzerland",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084240-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15782309
title: bycanistes_cylindricus_spades_01.fasta.gz
DOI: 10.5281/zenodo.15782310
title: bycanistes_cylindricus_spades_01.fasta.gz
DOI: 10.48323/scb2c-zay64
title: MS_Eclipse_2025_May

description: Eclipse + ICS6000    AMP03ADMHO06AIRLI04ABStandardsTKI02BITKI05AETKI04BEEclipse + Vanquish Neo    RLI02ABStandard
DOI: 10.48323/t4mtc-a2q46
title: MS_Eclipse_2025_May

description: Eclipse + ICS6000    AMP03ADMHO06AIRLI04ABStandardsTKI02BITKI05AETKI04BEEclipse + Vanquish Neo    RLI02ABStandard
DOI: 10.3535/ccg-hvq-r7s
title: Pseudastur albicollis ghiesbreghti

description: Digital Specimen for the physical specimen hosted at Natural History Museum of Denmark.
DOI: 10.3535/37v-ph8-e33
title: Clanga clanga

description: Digital Specimen for the physical specimen hosted at Natural History Museum of Denmark.
DOI: 10.34810/data373
title: PANACEA Environment SCF MWE merged Italian Lexicon

description: -
description: The Italian PANACEA_ENV_MWE_SCF_merged.lmf.xml lexicon is obtained by merging two automatically extracted lexicons: a domain lexicon (environment) for SCFs, PANACEA_SCF_IT_environment.lmf.xml and a MWE Italian lexicon env-mw.lmf.xml. The lexicon was produced at CNR-ILC, Pisa, Italy as an outcome of the PANACEA EU-FP7 Funded Project under Grant Agreement 248064 (http://www.panacea-lr.eu)
DOI: 10.3535/916-skl-f6e
title: Pseudastur albicollis albicollis

description: Digital Specimen for the physical specimen hosted at Natural History Museum of Denmark.
DOI: 10.15468/dl.ch7a4b
title: Occurrence Download

description: A dataset containing 289791 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Geometry POLYGON((-42.80962 -9.98172,-34.27819 -9.98172,-34.27819 -6.45824,-42.80962 -6.45824,-42.80962 -9.98172))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae"
 ]
}

 The dataset includes 289791 records from 248 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0084222-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dgyc86
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eurytemora bilobata Akatova, 1949"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006049-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15485/2514357
title: Heating effects on pyrogenic organic matter mass loss and temperature in a sand matrix in a lab setting from 2022

description: This dataset contains data associated with the preprint “A laboratory method for simulating the effects of subsequent fires on pyrogenic organic matter at different exposure depths in a sand matrix” (https://doi.org/10.1101/2024.07.30.605814), which has been accepted for publication in the International Journal of Wildland Fire. The dataset was generated to investigate the effects of subsequent fires on preexisting pyrogenic organic matter (PyOM) at different soil depths. Specifically, we designed a laboratory method to simulate soil heating from above, applying realistic heat flux profiles (High, Low, Control) derived from jack pine (Pinus banksiana Lamb.) log burns. Using a cone calorimeter, these profiles were applied to buried jack pine PyOM (produced at 350°C) in a sand matrix pyrocosm to examine PyOM mass loss at different depths (surface, 1 cm, 5 cm). Each treatment (e.g., High heat flux at 1 cm depth) was applied once to five replicates in a pyrocosm.The dataset includes mass loss fraction of PyOM and time-series temperature profiles (measured with type K thermocouples). Additionally, calibration datasets for high and low heat flux profiles are provided, including programmed heat flux profile data and three sets of calibration results. All datasets are in .csv format and were analyzed in R using code found at https://github.com/MengmengLuo/Reburning-pyrogenic-organic-matter-A-laboratory-method-for-dosing-dynamic-heat-fluxes-from-above. This dataset supports research on PyOM transformations during subsequent fires, and methodological advancements in simulating soil heating. It can be used to explore fire-induced PyOM alterations across different fire intensities and soil depths.
DOI: 10.15468/dl.7rsex3
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eurytemora thompsoni Willey, 1923"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006051-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.awq6hq
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Percottus glehni Dybowski, 1877)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation, Literature Occurrence)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006053-250310093411724/datasets/export for details.
DOI: 10.15485/2524531
title: Data for “Tree root nutrient uptake kinetics vary with nutrient availability, environmental conditions, and root traits: A global analysis”

description: This data package contains data and code used in the paper “Tree root nutrient uptake kinetics vary with nutrient availability, environmental conditions, and root traits: A global analysis”. The central product is a global dataset of root inorganic nutrient uptake rates and kinetics parameters covering temperate, boreal, and sub/tropical tree species, representing a collection of nutrient uptake data from published studies. This dataset enables tree investigation of root nutrient uptake rates across species, space, and experimental conditions. The data can also be combined with supplementary data on root and soil traits or with external datasets (e.g. R scripts contained within use data from FRED 3.0; (Iversen et al., 2021)). Contained within is the main nutrient data “uptake_data.csv” as well as 4 additional .csv files that link uptake data to supplementary measurements, source references, taxonomic information, and additional nutrient uptake measurements across nutrient gradients, and 1 .csv file that records meta-analysis results for plotting with the R scripts. There are seven R scripts that support data analysis and creation of the figures in the related publication.
DOI: 10.15485/2526256
title: Monthly averages of ED2 model simulations initialized with airborne lidar structure, Jan 1981-Dec 2018, Brazilian Amazon

description: Deforestation and forest degradation (selective logging, fires, fragmentation) have impacted nearly 40% of the original extent of the Brazilian Amazon, and have markedly impacted forest structure across the region. To date, few studies analysed how shifts in forest structure from degradation influence the forest sensitivity to climate extremes, because of the complex interactions between forest structure and micro-environmental conditions. To address this knowledge gap, we carried out a series of simulations across the Brazilian Amazon using the Ecosystem Demography Model (ED2), using observed forest structure derived from 541 airborne lidar transects (375 ha each) and two scenarios representing forest recovery and expansion of degradation to investigate how shifts in forest structure impact ecosystem function under near-average and extreme climate conditions, as part of the manuscript Longo et al 2025 "Degradation and Deforestation Increase the Sensitivity of the Amazon Forest to Climate Extremes". This dataset provides the output results from the ED2 model simulations for the three simulations at monthly time scales, in NetCDF format. For all simulations, we used bias-corrected hourly reanalyses (WFDE5) for most meteorological drivers, except for precipitation, which was obtained from CHIRPS. The meteorological drivers used in the study span 38 years (Jan 1981–Dec 2018). The output results correspond to the last 38 years of simulation (one full cycle of meteorological drivers), in which ED2 simulations used static stand structure (i.e., the forest structure was held constant). The following files are provided:ED2_emean_Global_R004_BrAmaz_s1c0t0l0f0.nc. This corresponds to the Control simulation. The forest structure was obtained from the airborne lidar.ED2_emean_Global_R005_BrAmaz_s1c0t1l1f0.nc. This corresponds to the Degraded simulation. The forest structure was obtained from a spin-up simulation initialized with airborne lidar and a scenario that expanded deforestation and selective logging across the Amazon.ED2_emean_Global_R006_BrAmaz_s1c0t1l0f0.nc. This corresponds to the Recovery simulation. The forest structure was obtained from a spin-up simulation initialized with airborne lidar and a scenario that completely halted deforestation and degradation, allowing degraded forests to recover for 38 years.We also provide file ED2_zones_R004_BrAmaz_s1c0t0l0f0.nc, which classifies each grid cell into zones used in the reference manuscript: 1: Southeast. 2: South. 3: West. 4: Central. 5: Northeast. 6: North. 7: Northwest". Index 0 corresponds to grid cells excluded from sub-region analyses because they were dominated by flooded forests, deforestation, and naturally non-forest vegetation.
DOI: 10.15468/dl.nfr256
title: Occurrence Download

description: A dataset containing 29602 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Freshwater pelagic invertebrates ecological collection NTNU University Museum",
 "TaxonKey is Rotifera"
 ]
}

 The dataset includes 29602 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006052-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s8pqqu
title: Occurrence Download

description: A dataset containing 395 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eurytemora velox (Lilljeborg, 1853)"
 ]
}

 The dataset includes 395 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006054-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tmnr8q
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eurytemora gracilicauda Akatova, 1949"
 ]
}

 The dataset includes 43 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006056-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f7q8qf
title: Occurrence Download

description: A dataset containing 10228 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Deroceras laeve (O.F.Müller, 1774))",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation, Literature Occurrence)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10228 records from 210 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006055-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.axjynx
title: Occurrence Download

description: A dataset containing 9210 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eurytemora affinis (Poppe, 1880)"
 ]
}

 The dataset includes 9210 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006057-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.arfzyg
title: Occurrence Download

description: A dataset containing 1454 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brachymyrmex minutus Forel, 1893",
 "HasGeospatialIssue is false",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1454 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006058-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v2s6jj
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Eurytemora minor Behning, 1938"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006061-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4knabq
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Thymallus baicalensis Dybowski, 1874)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation, Literature Occurrence)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006062-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.