cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3528788
title: Appendix A. Location of sites and diagram of nested sampling design.

description: Location of sites and diagram of nested sampling design.
DOI: 10.6084/m9.figshare.3528788.v1
title: Appendix A. Location of sites and diagram of nested sampling design.

description: Location of sites and diagram of nested sampling design.
DOI: 10.6084/m9.figshare.3528785
title: Appendix B. Nonnative plant species observed within study sites in Appalachian forests.

description: Nonnative plant species observed within study sites in Appalachian forests.
DOI: 10.6084/m9.figshare.3528785.v1
title: Appendix B. Nonnative plant species observed within study sites in Appalachian forests.

description: Nonnative plant species observed within study sites in Appalachian forests.
DOI: 10.6084/m9.figshare.3528782
title: Appendix A. List of studies included in the meta-analysis including citation and information on the habitat, the consumer group, the experimental units, the substratum the algae grew on, and the number of experiments obtained from each publication.

description: List of studies included in the meta-analysis including citation and information on the habitat, the consumer group, the experimental units, the substratum the algae grew on, and the number of experiments obtained from each publication.
DOI: 10.6084/m9.figshare.3528782.v1
title: Appendix A. List of studies included in the meta-analysis including citation and information on the habitat, the consumer group, the experimental units, the substratum the algae grew on, and the number of experiments obtained from each publication.

description: List of studies included in the meta-analysis including citation and information on the habitat, the consumer group, the experimental units, the substratum the algae grew on, and the number of experiments obtained from each publication.
DOI: 10.6084/m9.figshare.3528779
title: Appendix B. Three tables presenting full statistical results for the meta-analysis on grazer effects on the absolute and relative spatial heterogeneity of algal biomass.

description: Three tables presenting full statistical results for the meta-analysis on grazer effects on the absolute and relative spatial heterogeneity of algal biomass.
DOI: 10.6084/m9.figshare.3528776
title: Appendix A. Statistical results for the effects of Sarcocornia perennis removal on herbivory and growth of two Spartina densiflora patch size classes.

description: Statistical results for the effects of Sarcocornia perennis removal on herbivory and growth of two Spartina densiflora patch size classes.
DOI: 10.6084/m9.figshare.3528776.v1
title: Appendix A. Statistical results for the effects of Sarcocornia perennis removal on herbivory and growth of two Spartina densiflora patch size classes.

description: Statistical results for the effects of Sarcocornia perennis removal on herbivory and growth of two Spartina densiflora patch size classes.
DOI: 10.6084/m9.figshare.3528773
title: Appendix A. A photograph of aphids (Aphis oestlundi) and ants (Crematogaster lineolata) interacting on evening primrose.

description: A photograph of aphids (Aphis oestlundi) and ants (Crematogaster lineolata) interacting on evening primrose.
DOI: 10.6084/m9.figshare.3528773.v1
title: Appendix A. A photograph of aphids (Aphis oestlundi) and ants (Crematogaster lineolata) interacting on evening primrose.

description: A photograph of aphids (Aphis oestlundi) and ants (Crematogaster lineolata) interacting on evening primrose.
DOI: 10.6084/m9.figshare.3528770
title: Appendix B. Descriptive statistics for the effects of plant genotype on plant traits.

description: Descriptive statistics for the effects of plant genotype on plant traits.
DOI: 10.6084/m9.figshare.3528770.v1
title: Appendix B. Descriptive statistics for the effects of plant genotype on plant traits.

description: Descriptive statistics for the effects of plant genotype on plant traits.
DOI: 10.6084/m9.figshare.3528767
title: Appendix C. The effects of aphid density, ants, and plant genotype on the final number of aphids per plant.

description: The effects of aphid density, ants, and plant genotype on the final number of aphids per plant.
DOI: 10.6084/m9.figshare.3528767.v1
title: Appendix C. The effects of aphid density, ants, and plant genotype on the final number of aphids per plant.

description: The effects of aphid density, ants, and plant genotype on the final number of aphids per plant.
DOI: 10.6084/m9.figshare.3528764
title: Appendix D. The response of ant abundance and predator diversity to final aphid density.

description: The response of ant abundance and predator diversity to final aphid density.
DOI: 10.6084/m9.figshare.3528764.v1
title: Appendix D. The response of ant abundance and predator diversity to final aphid density.

description: The response of ant abundance and predator diversity to final aphid density.
DOI: 10.6084/m9.figshare.3528761
title: Appendix A. Verifying capture–recapture assumptions.

description: Verifying capture–recapture assumptions.
DOI: 10.6084/m9.figshare.3528761.v1
title: Appendix A. Verifying capture–recapture assumptions.

description: Verifying capture–recapture assumptions.
DOI: 10.6084/m9.figshare.3528758
title: Appendix B. Modeling survival and encounter probability.

description: Modeling survival and encounter probability.
DOI: 10.6084/m9.figshare.3528758.v1
title: Appendix B. Modeling survival and encounter probability.

description: Modeling survival and encounter probability.
DOI: 10.6084/m9.figshare.3528755
title: Appendix C. Species- and colony-specific population matrix models.

description: Species- and colony-specific population matrix models.
DOI: 10.6084/m9.figshare.3528755.v1
title: Appendix C. Species- and colony-specific population matrix models.

description: Species- and colony-specific population matrix models.
DOI: 10.6084/m9.figshare.3528752
title: Appendix A. Additional database methods.

description: Additional database methods.
DOI: 10.6084/m9.figshare.3528752.v1
title: Appendix A. Additional database methods.

description: Additional database methods.
DOI: 10.6084/m9.figshare.3528749
title: Appendix B. Additional methods for spatial and phylogenetic analysis.

description: Additional methods for spatial and phylogenetic analysis.
DOI: 10.6084/m9.figshare.3528749.v1
title: Appendix B. Additional methods for spatial and phylogenetic analysis.

description: Additional methods for spatial and phylogenetic analysis.
DOI: 10.6084/m9.figshare.3528746
title: Appendix C. Results of maximum-likelihood models controlling for spatial and phylogenetic autocorrelation.

description: Results of maximum-likelihood models controlling for spatial and phylogenetic autocorrelation.
DOI: 10.6084/m9.figshare.3528746.v1
title: Appendix C. Results of maximum-likelihood models controlling for spatial and phylogenetic autocorrelation.

description: Results of maximum-likelihood models controlling for spatial and phylogenetic autocorrelation.
DOI: 10.6084/m9.figshare.3528743
title: Appendix D. Database literature sources.

description: Database literature sources.
DOI: 10.6084/m9.figshare.3528743.v1
title: Appendix D. Database literature sources.

description: Database literature sources.
DOI: 10.6084/m9.figshare.3528740
title: Appendix A. A figure showing ecological and evolutionary dynamics of color pattern polymorphism.

description: A figure showing ecological and evolutionary dynamics of color pattern polymorphism.
DOI: 10.6084/m9.figshare.3528740.v1
title: Appendix A. A figure showing ecological and evolutionary dynamics of color pattern polymorphism.

description: A figure showing ecological and evolutionary dynamics of color pattern polymorphism.
DOI: 10.6084/m9.figshare.3528737
title: Appendix B. A figure showing the influence of color polymorphism on range expansion, evolution of clines, and geographic variation.

description: A figure showing the influence of color polymorphism on range expansion, evolution of clines, and geographic variation.
DOI: 10.6084/m9.figshare.3528737.v1
title: Appendix B. A figure showing the influence of color polymorphism on range expansion, evolution of clines, and geographic variation.

description: A figure showing the influence of color polymorphism on range expansion, evolution of clines, and geographic variation.
DOI: 10.6084/m9.figshare.3528734
title: Appendix C. A figure showing the influence of color pattern polymorphism on population declines, range contractions, and extinction.

description: A figure showing the influence of color pattern polymorphism on population declines, range contractions, and extinction.
DOI: 10.6084/m9.figshare.3528734.v1
title: Appendix C. A figure showing the influence of color pattern polymorphism on population declines, range contractions, and extinction.

description: A figure showing the influence of color pattern polymorphism on population declines, range contractions, and extinction.
DOI: 10.6084/m9.figshare.3528731
title: Appendix D. A figure showing the influence of color pattern polymorphism on evolution of reproductive isolation.

description: A figure showing the influence of color pattern polymorphism on evolution of reproductive isolation.
DOI: 10.6084/m9.figshare.3528731.v1
title: Appendix D. A figure showing the influence of color pattern polymorphism on evolution of reproductive isolation.

description: A figure showing the influence of color pattern polymorphism on evolution of reproductive isolation.
DOI: 10.6084/m9.figshare.3528728
title: Appendix A. Descriptions of the demographic studies used in the analysis.

description: Descriptions of the demographic studies used in the analysis.
DOI: 10.6084/m9.figshare.3528725
title: Appendix B. Methods for constructing projection matrices and computing stochastic elasticities.

description: Methods for constructing projection matrices and computing stochastic elasticities.
DOI: 10.6084/m9.figshare.3528722
title: Appendix C. Statistical tables and additional results.

description: Statistical tables and additional results.
DOI: 10.6084/m9.figshare.3528719
title: Appendix D. Sensitivity to increasing variability vs. longevity in randomly constructed life histories.

description: Sensitivity to increasing variability vs. longevity in randomly constructed life histories.
DOI: 10.6084/m9.figshare.3528716
title: Appendix A. Notes on the calculation of scope.

description: Notes on the calculation of scope.
DOI: 10.6084/m9.figshare.3528716.v1
title: Appendix A. Notes on the calculation of scope.

description: Notes on the calculation of scope.
DOI: 10.6084/m9.figshare.3528713
title: Appendix A. Descriptions of maximum autocorrelation factor analysis and associated statistics.

description: Descriptions of maximum autocorrelation factor analysis and associated statistics.
DOI: 10.6084/m9.figshare.3528713.v1
title: Appendix A. Descriptions of maximum autocorrelation factor analysis and associated statistics.

description: Descriptions of maximum autocorrelation factor analysis and associated statistics.
DOI: 10.6084/m9.figshare.3528710
title: Supplement 1. MATLAB source codes used to calculate maximum autocorrelation factors.

description: File List GMAF.m.txt -- Matlab source codes used to calculate maximum autocorrelation factors Description Matlab source codes used to calculate maximum autocorrelation factors. By removing the file name extension ".txt", it becomes a source code that runs under Matlab (MathWorks 2001. MATLAB. Version 7.0, release 14. MathWorks, Natick, Massachusetts, USA). Please see MathWorks (2001) for how to run source codes.
DOI: 10.6084/m9.figshare.3528710.v1
title: Supplement 1. MATLAB source codes used to calculate maximum autocorrelation factors.

description: File List GMAF.m.txt -- Matlab source codes used to calculate maximum autocorrelation factors Description Matlab source codes used to calculate maximum autocorrelation factors. By removing the file name extension ".txt", it becomes a source code that runs under Matlab (MathWorks 2001. MATLAB. Version 7.0, release 14. MathWorks, Natick, Massachusetts, USA). Please see MathWorks (2001) for how to run source codes.
DOI: 10.6084/m9.figshare.3528707
title: Data Paper. Data Paper

description: File List Files are Ascii text, tab delimited. "-999" denotes a lack of information for that field (sampling was not carried out in that particular plot for that year). Croche_VegCover.txt-- 7660 records. Croche_SeedDens.txt -- 1447 records. Croche_Env.txt -- 557 records. Croche_BA.txt -- 205 records. Description The Lac Croche data set covers a nine-year period (1998–2006) of detailed understory vegetation sampling of a temperate North American forest located in the <i>Station de Biologie des Laurentides</i> (SBL), Québec, Canada. After having been submitted to logging in the late 19th and early 20th centuries followed by a major fire in 1923, the forest is currently in a transition state dominated by pioneer canopy tree species. The sampling design is based on the annual re-sampling of 43 permanent 400-m<sup>2</sup> plots along five transects running parallel to an elevation gradient from a lake (Lac Croche) to the top of a hill. Abundances of all understory vascular plants (tree seedlings, herbs, and shrubs) are included in the data set and are expressed either as absolute densities or cover classes, depending on life form. The location and elevation of each plot, as well as some key environmenatl descriptors such as slope, rockiness, canopy openness, age of the largest tree, basal area of mature trees, and a number of soil variables are also available. The Lac Croche data set should prove useful for testing hypotheses about forest vegetation dynamics at different sacles, as well as to test new statistical tools developed for the analysis of the spatio-temporal variation of plant distributions. Sampling is ongoing, and new data will be added every year. <i>Key words</i>: <i>community patterns ; forest succession; spatial variation; Station de Biologie des Laurentides (SBL); temperate forest; temporal variation; understory plants; vegetation dynamics .</i>
DOI: 10.6084/m9.figshare.3528704
title: Appendix A. Link between the sexual segregation and aggregation statistic (SSAS) and the segregation coefficient (SC).

description: Link between the sexual segregation and aggregation statistic (SSAS) and the segregation coefficient (SC).
DOI: 10.6084/m9.figshare.3528704.v1
title: Appendix A. Link between the sexual segregation and aggregation statistic (SSAS) and the segregation coefficient (SC).

description: Link between the sexual segregation and aggregation statistic (SSAS) and the segregation coefficient (SC).
DOI: 10.6084/m9.figshare.3528701
title: Appendix B. Mathematical development of the SSAS.

description: Mathematical development of the SSAS.
DOI: 10.6084/m9.figshare.3528701.v1
title: Appendix B. Mathematical development of the SSAS.

description: Mathematical development of the SSAS.
DOI: 10.6084/m9.figshare.3528698
title: Supplement 1. R code used to format the data and compute the SSAS.

description: File List SSAS.R Description The SSAS.R file is a plain text ascii file. The file contains the basic command lines to download the data (group composition of isard, roe deer, and red deer) and to perform a test for sexual segregation and aggregation on count based data. The code allows users to repeat the analyses and to draw the plots we present in the paper. The code is intended to be used with R statistical software. Function definitions: SSAS = Compute the Sexual Segregation and Aggregation Statistic (SSAS) of the observed data and the values of SSAS expected under the hypothesis of random association of males and females (default is set at the 95% critical level). splitmfd = format raw data, a matrix with 3 columns (number of males, females and a grouping variable, i.e. month in this case), into a list. plot1 = plot the month-specific value of SSAS (observed value) and the range of SSAS values where a random association of males and females occurs. The plot is a simple graphical representation of the formal tests returned by the SSAS function.
DOI: 10.6084/m9.figshare.3528698.v1
title: Supplement 1. R code used to format the data and compute the SSAS.

description: File List SSAS.R Description The SSAS.R file is a plain text ascii file. The file contains the basic command lines to download the data (group composition of isard, roe deer, and red deer) and to perform a test for sexual segregation and aggregation on count based data. The code allows users to repeat the analyses and to draw the plots we present in the paper. The code is intended to be used with R statistical software. Function definitions: SSAS = Compute the Sexual Segregation and Aggregation Statistic (SSAS) of the observed data and the values of SSAS expected under the hypothesis of random association of males and females (default is set at the 95% critical level). splitmfd = format raw data, a matrix with 3 columns (number of males, females and a grouping variable, i.e. month in this case), into a list. plot1 = plot the month-specific value of SSAS (observed value) and the range of SSAS values where a random association of males and females occurs. The plot is a simple graphical representation of the formal tests returned by the SSAS function.
DOI: 10.6084/m9.figshare.3528695
title: Appendix A. A table of microbial phospholipid fatty acids (PLFA), as functions of plant diversity and atmospheric CO2 treatment.

description: A table of microbial phospholipid fatty acids (PLFA), as functions of plant diversity and atmospheric CO2 treatment.
DOI: 10.6084/m9.figshare.3528692
title: Appendix A. Details of the study design and methods.

description: Details of the study design and methods.
DOI: 10.6084/m9.figshare.3528695.v1
title: Appendix A. A table of microbial phospholipid fatty acids (PLFA), as functions of plant diversity and atmospheric CO2 treatment.

description: A table of microbial phospholipid fatty acids (PLFA), as functions of plant diversity and atmospheric CO2 treatment.
DOI: 10.6084/m9.figshare.3528689
title: Appendix B. Model details.

description: Model details.
DOI: 10.6084/m9.figshare.3528689.v1
title: Appendix B. Model details.

description: Model details.
DOI: 10.6084/m9.figshare.3528683
title: Supplement 1. WinBugs code.

description: File List Diez_WinBugsCode.txt Description The file Diez_WinBugsCode.txt gives the basic code for fitting a multilevel model of the probability of occurrence and abundance conditional on covariates at the cell and grid levels, and including spatial error terms.
DOI: 10.6084/m9.figshare.3528680
title: Appendix A. Study design, indicating the number of polygons sampled in each combination of pre- and post-introduction land use and modern harvesting activity.

description: Study design, indicating the number of polygons sampled in each combination of pre- and post-introduction land use and modern harvesting activity.
DOI: 10.6084/m9.figshare.3528680.v1
title: Appendix A. Study design, indicating the number of polygons sampled in each combination of pre- and post-introduction land use and modern harvesting activity.

description: Study design, indicating the number of polygons sampled in each combination of pre- and post-introduction land use and modern harvesting activity.
DOI: 10.6084/m9.figshare.3528677
title: Appendix B. Non-edaphic environmental variables: means for historical and modern land-use categories.

description: Non-edaphic environmental variables: means for historical and modern land-use categories.
DOI: 10.6084/m9.figshare.3528677.v1
title: Appendix B. Non-edaphic environmental variables: means for historical and modern land-use categories.

description: Non-edaphic environmental variables: means for historical and modern land-use categories.
DOI: 10.6084/m9.figshare.3528674
title: Appendix C. Edaphic variables: means for historical and modern land-use categories.

description: Edaphic variables: means for historical and modern land-use categories.
DOI: 10.6084/m9.figshare.3528674.v1
title: Appendix C. Edaphic variables: means for historical and modern land-use categories.

description: Edaphic variables: means for historical and modern land-use categories.
DOI: 10.6084/m9.figshare.3528671
title: Appendix D. Principal component analysis of non-edaphic environmental variables: factor loading matrix.

description: Principal component analysis of non-edaphic environmental variables: factor loading matrix.
DOI: 10.6084/m9.figshare.3528671.v1
title: Appendix D. Principal component analysis of non-edaphic environmental variables: factor loading matrix.

description: Principal component analysis of non-edaphic environmental variables: factor loading matrix.
DOI: 10.6084/m9.figshare.3528668
title: Appendix E. Principal component analysis of edaphic variables: factor loading matrix.

description: Principal component analysis of edaphic variables: factor loading matrix.
DOI: 10.6084/m9.figshare.3528665
title: Appendix F. Multiple regression of disturbance variables and environmental principal components vs. Berberis thunbergii occurrence.

description: Multiple regression of disturbance variables and environmental principal components vs. Berberis thunbergii occurrence.
DOI: 10.6084/m9.figshare.3528665.v1
title: Appendix F. Multiple regression of disturbance variables and environmental principal components vs. Berberis thunbergii occurrence.

description: Multiple regression of disturbance variables and environmental principal components vs. Berberis thunbergii occurrence.
DOI: 10.6084/m9.figshare.3528662
title: Appendix G. Multiple regression of disturbance variables and environmental principal components vs. Berberis thunbergii log-abundance.

description: Multiple regression of disturbance variables and environmental principal components vs. Berberis thunbergii log-abundance.
DOI: 10.6084/m9.figshare.3528662.v1
title: Appendix G. Multiple regression of disturbance variables and environmental principal components vs. Berberis thunbergii log-abundance.

description: Multiple regression of disturbance variables and environmental principal components vs. Berberis thunbergii log-abundance.
DOI: 10.6084/m9.figshare.3528659
title: Appendix A. Table of regression equations to estimate leaf area and spore production from simple field measurements of fern plants.

description: Table of regression equations to estimate leaf area and spore production from simple field measurements of fern plants.
DOI: 10.6084/m9.figshare.3528659.v1
title: Appendix A. Table of regression equations to estimate leaf area and spore production from simple field measurements of fern plants.

description: Table of regression equations to estimate leaf area and spore production from simple field measurements of fern plants.
DOI: 10.6084/m9.figshare.3528656
title: Appendix B. Additional details of methods used.

description: Additional details of methods used.
DOI: 10.6084/m9.figshare.3528656.v1
title: Appendix B. Additional details of methods used.

description: Additional details of methods used.
DOI: 10.6084/m9.figshare.3528653
title: Appendix C. Statistical analysis of the spore-sowing experiment.

description: Statistical analysis of the spore-sowing experiment.
DOI: 10.6084/m9.figshare.3528653.v1
title: Appendix C. Statistical analysis of the spore-sowing experiment.

description: Statistical analysis of the spore-sowing experiment.
DOI: 10.6084/m9.figshare.3528650
title: Appendix A. Analytical formulas of the point processes.

description: Analytical formulas of the point processes.
DOI: 10.6084/m9.figshare.3528647
title: Appendix B. Parameter fitting.

description: Parameter fitting.
DOI: 10.6084/m9.figshare.3528644
title: Appendix C. Qualitative reconstruction of the 34 large-scale clusters of the double-cluster component pattern and cluster occupancy for recruits and adults.

description: Qualitative reconstruction of the 34 large-scale clusters of the double-cluster component pattern and cluster occupancy for recruits and adults.