cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14167666.v1
title: Additional file 10 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 10: Table S3. Gene ontology (GO) of STAU2 interactors in hTERT-RPE1 cells. List of significant shared GO terms that are over-represented in BioID2, using Metascape (A Gene Annotation & Analysis Resources [78]).
DOI: 10.6073/pasta/30c338eb5f7cc101ee871c42dcb2482f
title: Jornada Basin LTER: Wireless meteorological station at NPP M-RABB site: 30-minute summary data: 2013 - ongoing

description: 30-minute summary data at NPP M-RABB met station. Average air temperature, relative humidity, wind speed, wind direction, and solar radiation are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP M-RABB site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Solar radiation is measured at 3m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6084/m9.figshare.14167666
title: Additional file 10 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 10: Table S3. Gene ontology (GO) of STAU2 interactors in hTERT-RPE1 cells. List of significant shared GO terms that are over-represented in BioID2, using Metascape (A Gene Annotation & Analysis Resources [78]).
DOI: 10.6084/m9.figshare.14167672
title: Additional file 12 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 12: Table S5. List of all biotinylated peptides in the TurboID assay. The TurboID assay was performed in standard conditions or in the presence of the CHK1 inhibitor PF47.
DOI: 10.6084/m9.figshare.14167672.v1
title: Additional file 12 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 12: Table S5. List of all biotinylated peptides in the TurboID assay. The TurboID assay was performed in standard conditions or in the presence of the CHK1 inhibitor PF47.
DOI: 10.6084/m9.figshare.14167675
title: Additional file 13 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 13: Table S6. List of STAU2 interactors in the TurboID assay with an interaction probability score of 0.7 or better, using the SAINT and CRAPome softwares.
DOI: 10.6084/m9.figshare.14167678
title: Additional file 14 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 14: Table S7. Gene ontology (GO) of STAU2 interactors in hTERT-RPE1 cells. List of significant shared GO terms that are over-represented in TurboID, using Metascape (A Gene Annotation & Analysis Resources [78]).
DOI: 10.6084/m9.figshare.14167675.v1
title: Additional file 13 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 13: Table S6. List of STAU2 interactors in the TurboID assay with an interaction probability score of 0.7 or better, using the SAINT and CRAPome softwares.
DOI: 10.6084/m9.figshare.14167678.v1
title: Additional file 14 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 14: Table S7. Gene ontology (GO) of STAU2 interactors in hTERT-RPE1 cells. List of significant shared GO terms that are over-represented in TurboID, using Metascape (A Gene Annotation & Analysis Resources [78]).
DOI: 10.6084/m9.figshare.14167681.v1
title: Additional file 15 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 15: Table S8. List of STAU2 interactors that are lost in PF47 conditions.
DOI: 10.6084/m9.figshare.14167684
title: Additional file 16 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 16: Table S9. Gene ontology (GO) of STAU2 interactors that show reduced proximity to STAU2 in hTERT-RPE1 cells treated with the CHK1 inhibitor PF47 compared to untreated cells. List of significant shared GO terms that are over-represented in TurboID, using Metascape (A Gene Annotation & Analysis Resources [78]).
DOI: 10.6084/m9.figshare.14167681
title: Additional file 15 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 15: Table S8. List of STAU2 interactors that are lost in PF47 conditions.
DOI: 10.6084/m9.figshare.14167708
title: Additional file 8 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 8: Table S1. List of all biotinylated proteins in the BioID2 assay.
DOI: 10.6084/m9.figshare.14167708.v1
title: Additional file 8 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 8: Table S1. List of all biotinylated proteins in the BioID2 assay.
DOI: 10.6084/m9.figshare.14167711.v1
title: Additional file 9 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 9: Table S2. List of STAU2 interactors with an interaction probability score of 0.7 or better as calculated with the SAINT and CRAPome softwares.
DOI: 10.6084/m9.figshare.14167711
title: Additional file 9 of STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells

description: Additional file 9: Table S2. List of STAU2 interactors with an interaction probability score of 0.7 or better as calculated with the SAINT and CRAPome softwares.
DOI: 10.6073/pasta/32f4f727be25f3fcd215fab9ba685553
title: Jornada Basin LTER: Wireless meteorological station at NPP M-RABB site: Daily summary data: 2013 - ongoing

description: Daily summary data at NPP M-RABB met station. Average/maximum/minimum air temperature; average/maximum relative humidity and wind speed and average wind direction; solar radiation; albedo. These are measured and calculated based on 1-second scan rate of all sensors located at an automated meteorological station installed at Jornada LTER NPP M-RABB site. Wind speed is measured at 75 cm, 150 cm, and 300 cm, wind direction at approximately 3m, and air temperature and relative humidity at approximate 2.5m. Solar radiation is measured at 3m. This climate station is operated by the Jornada LTER Program. This is an ONGOING dataset.
DOI: 10.6073/pasta/b256235f8500e0777a2d4e13841332ff
title: Jornada Basin LTER: Wireless meteorological station at NPP M-RABB site: 1-second summary precipitation data: 2013 - ongoing

description: 1-second summary precipitation data at NPP M-RABB met station. Total precipitation per second is recorded only if there is measurable precipitation. This is recorded at an automated meteorological station installed at Jornada LTER NPP M-RABB site.. This climate station is operated by the Jornada LTER Program. IMPORTANT: Rainfall is only recorded when a bucket tip occurs on the tipping bucket rain gauge. If there is missing data due to equipment or other problems, there will be no indication of this within this dataset. The user needs to review precipitation values in the 30 minute or hourly summary datasets to determine if there are missing data in this 1 second detailed precipitation dataset. Reference the package i.d.'s knb-lter-jrn.210437023, knb-lter-jrn.210437038, and knb-lter-jrn.210437053 for the NPP M-RABB met station 30 minute, hourly, and daily summary datasets, respectively. This is an ONGOING dataset.
DOI: 10.6084/m9.figshare.14167753
title: Additional file 1 of DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks

description: Additional file 1. Genes with higher ranking than the true targets in Caenorhabditis elegans dataset
DOI: 10.6084/m9.figshare.14167753.v1
title: Additional file 1 of DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks

description: Additional file 1. Genes with higher ranking than the true targets in Caenorhabditis elegans dataset
DOI: 10.6084/m9.figshare.14167759
title: Additional file 3 of DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks

description: Additional file 3. Enriched GO terms and Reactome pathways of the top gene target predictions from DeltaNeTS+, DeMAND and log2FC analysis
DOI: 10.6084/m9.figshare.14167759.v1
title: Additional file 3 of DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks

description: Additional file 3. Enriched GO terms and Reactome pathways of the top gene target predictions from DeltaNeTS+, DeMAND and log2FC analysis
DOI: 10.6084/m9.figshare.14167762
title: Additional file 4 of DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks

description: Additional file 4. Reactome pathway enrichment analysis across the three phases of H1N1 and H5N1 influenza-A infection in Calu-3: early (phase 1: 0-7hr), middle (phase 2: 7-18hrs) and late (phase 3: &gt;18hrs)
DOI: 10.6084/m9.figshare.14167765
title: Additional file 5 of DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks

description: Additional file 5. DeltaNeTS+ analysis of H1N1 and H5N1 influenza-A infection in Calu-3: early (phase 1: 0-7hr), middle (phase 2: 7-18hrs) and late (phase 3: &gt;18hrs)
DOI: 10.6084/m9.figshare.14167765.v1
title: Additional file 5 of DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks

description: Additional file 5. DeltaNeTS+ analysis of H1N1 and H5N1 influenza-A infection in Calu-3: early (phase 1: 0-7hr), middle (phase 2: 7-18hrs) and late (phase 3: &gt;18hrs)
DOI: 10.6084/m9.figshare.14167768
title: Additional file 6 of DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks

description: Additional file 6. GO enrichment analysis of WGCNA modules derived from DeltaNeTS+ analysis of H1N1 and H5N1 influenza-A infection in Calu-3 (terms with adjusted p-value &lt; 0.5 are highlighted in red)
DOI: 10.6084/m9.figshare.14167768.v1
title: Additional file 6 of DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks

description: Additional file 6. GO enrichment analysis of WGCNA modules derived from DeltaNeTS+ analysis of H1N1 and H5N1 influenza-A infection in Calu-3 (terms with adjusted p-value &lt; 0.5 are highlighted in red)
DOI: 10.6084/m9.figshare.14167771
title: Additional file 7 of DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks

description: Additional file 7. Reactome pathway enrichment analysis of WGCNA modules derived from DeltaNeTS+ analysis of influenza-A infection in Calu-3 (pathway with q-value &lt; 0.1 are highlighted in red)
DOI: 10.6084/m9.figshare.14167762.v1
title: Additional file 4 of DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks

description: Additional file 4. Reactome pathway enrichment analysis across the three phases of H1N1 and H5N1 influenza-A infection in Calu-3: early (phase 1: 0-7hr), middle (phase 2: 7-18hrs) and late (phase 3: &gt;18hrs)
DOI: 10.6084/m9.figshare.14167771.v1
title: Additional file 7 of DeltaNeTS+: elucidating the mechanism of drugs and diseases using gene expression and transcriptional regulatory networks

description: Additional file 7. Reactome pathway enrichment analysis of WGCNA modules derived from DeltaNeTS+ analysis of influenza-A infection in Calu-3 (pathway with q-value &lt; 0.1 are highlighted in red)
DOI: 10.6084/m9.figshare.14167804.v1
title: Additional file 1 of Systematic review of available software for multi-arm multi-stage and platform clinical trial design

description: Additional file 1: S1 Spreadsheet containing information about all the screened articles and extracted information.
DOI: 10.6084/m9.figshare.14167813
title: Additional file 3 of Systematic review of available software for multi-arm multi-stage and platform clinical trial design

description: Additional file 3: S3 Further information regarding definition of features in Table 2.
DOI: 10.6084/m9.figshare.14167813.v1
title: Additional file 3 of Systematic review of available software for multi-arm multi-stage and platform clinical trial design

description: Additional file 3: S3 Further information regarding definition of features in Table 2.
DOI: 10.6084/m9.figshare.14167804
title: Additional file 1 of Systematic review of available software for multi-arm multi-stage and platform clinical trial design

description: Additional file 1: S1 Spreadsheet containing information about all the screened articles and extracted information.
DOI: 10.6084/m9.figshare.14167840
title: Additional file 1 of The comparative effect of exposure to various risk factors on the risk of hyperuricaemia: diet has a weak causal effect

description: Additional file 1: Table S1. Sex-stratified population attributable and average attributable fractions for environmental and endogenous risk exposures for hyperuricaemia. Table S2. Population attributable and average attributable fractions for 30 genetic risk exposures for hyperuricaemia. Table S3. Causal effects of dietary habits on urate levels: Mendelian randomisation results. Table S4. Genetic variants comprising the four dietary habit instrumental variables.
DOI: 10.6084/m9.figshare.14167840.v1
title: Additional file 1 of The comparative effect of exposure to various risk factors on the risk of hyperuricaemia: diet has a weak causal effect

description: Additional file 1: Table S1. Sex-stratified population attributable and average attributable fractions for environmental and endogenous risk exposures for hyperuricaemia. Table S2. Population attributable and average attributable fractions for 30 genetic risk exposures for hyperuricaemia. Table S3. Causal effects of dietary habits on urate levels: Mendelian randomisation results. Table S4. Genetic variants comprising the four dietary habit instrumental variables.
DOI: 10.6073/pasta/6d08bbeb0ed208414357ee14497e608d
title: Jornada Basin LTER: Wireless meteorological station at NPP M-RABB site: 30-minute soil volumetric water content data: 2013 - ongoing

description: 30-minute Soil Moisture data at NPP M-RABB met station. Collection of soil volumetric water content data at Jornada LTER NPP sites, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are measured every 30 minutes at an automated meteorological station installed at Jornada LTER NPP M-RABB site. Measurements are made every 30 minutes at 10 cm, 20 cm, and 30 cm soil depths. This is an ONGOING dataset.
DOI: 10.6084/m9.figshare.14167855
title: Additional file 3 of Identification of cutaneous fungi and mites in adult atopic dermatitis: analysis by targeted 18S rRNA amplicon sequencing

description: Additional file 3.
DOI: 10.6073/pasta/594579055813b34142621b55a4519930
title: Jornada Basin LTER: Wireless meteorological station at NPP M-RABB site: Daily average soil volumetric water content data: 2013 - ongoing

description: Daily average of 30-minute Volumetric Water Content at NPP M-RABB met station. Collection of soil volumetric water content data at Jornada LTER NPP sites, New Mexico, supports the environmental monitoring objectives of the Jornada LTER monitoring program that look at plant-soil water dynamics. Volumetric water content, bulk electrical conductivity, soil temperature, and bulk dielectric permittivity are measured and calculated at an automated meteorological station installed at Jornada LTER NPP M-RABB site. The daily average at 3 soil depths is calculated from measurements made every 30 minutes at 10 cm, 20 cm, and 30 cm. This is an ONGOING dataset.
DOI: 10.6084/m9.figshare.14167861
title: Additional file 4 of Identification of cutaneous fungi and mites in adult atopic dermatitis: analysis by targeted 18S rRNA amplicon sequencing

description: Additional file 4.
DOI: 10.6084/m9.figshare.14167861.v1
title: Additional file 4 of Identification of cutaneous fungi and mites in adult atopic dermatitis: analysis by targeted 18S rRNA amplicon sequencing

description: Additional file 4.
DOI: 10.6084/m9.figshare.14167867.v1
title: Additional file 5 of Identification of cutaneous fungi and mites in adult atopic dermatitis: analysis by targeted 18S rRNA amplicon sequencing

description: Additional file 5.
DOI: 10.6084/m9.figshare.14167855.v1
title: Additional file 3 of Identification of cutaneous fungi and mites in adult atopic dermatitis: analysis by targeted 18S rRNA amplicon sequencing

description: Additional file 3.
DOI: 10.6084/m9.figshare.14167867
title: Additional file 5 of Identification of cutaneous fungi and mites in adult atopic dermatitis: analysis by targeted 18S rRNA amplicon sequencing

description: Additional file 5.
DOI: 10.6084/m9.figshare.14167643
title: Dataset students entrepreneurial intentions (csv).csv

description: This dataset contain information about students' entrepreneurial intentions (Indonesian sample)
DOI: 10.6084/m9.figshare.14167999
title: Additional file 2 of Borrelia burgdorferi infection modifies protein content in saliva of Ixodes scapularis nymphs

description: Additional file 2.
DOI: 10.6084/m9.figshare.14168002
title: Additional file 3 of Borrelia burgdorferi infection modifies protein content in saliva of Ixodes scapularis nymphs

description: Additional file 3.
DOI: 10.6084/m9.figshare.14167999.v1
title: Additional file 2 of Borrelia burgdorferi infection modifies protein content in saliva of Ixodes scapularis nymphs

description: Additional file 2.
DOI: 10.6084/m9.figshare.14168002.v1
title: Additional file 3 of Borrelia burgdorferi infection modifies protein content in saliva of Ixodes scapularis nymphs

description: Additional file 3.
DOI: 10.6084/m9.figshare.14168041
title: Additional file 1 of Genomic analysis reveals independent evolution of Plasmodium falciparum populations in Ethiopia

description: Additional file 1. Summary of sequence reads and ENA accession number per isolate included in this study.
DOI: 10.6084/m9.figshare.14168041.v1
title: Additional file 1 of Genomic analysis reveals independent evolution of Plasmodium falciparum populations in Ethiopia

description: Additional file 1. Summary of sequence reads and ENA accession number per isolate included in this study.
DOI: 10.6084/m9.figshare.14168050
title: Additional file 3 of Genomic analysis reveals independent evolution of Plasmodium falciparum populations in Ethiopia

description: Additional file 3. FWS values of samples in P. falciparum populations analyzed in this study.
DOI: 10.6084/m9.figshare.14168050.v1
title: Additional file 3 of Genomic analysis reveals independent evolution of Plasmodium falciparum populations in Ethiopia

description: Additional file 3. FWS values of samples in P. falciparum populations analyzed in this study.
DOI: 10.6084/m9.figshare.14168056
title: Additional file 4 of Genomic analysis reveals independent evolution of Plasmodium falciparum populations in Ethiopia

description: Additional file 4. Genes that had ≥ 5 SNPs and a Tajima D of ≥ 1 that are defined as genes under positive balancing selection.
DOI: 10.6084/m9.figshare.14168056.v1
title: Additional file 4 of Genomic analysis reveals independent evolution of Plasmodium falciparum populations in Ethiopia

description: Additional file 4. Genes that had ≥ 5 SNPs and a Tajima D of ≥ 1 that are defined as genes under positive balancing selection.
DOI: 10.6084/m9.figshare.14168146
title: Additional file 2 of An open-label, pilot study of veliparib and lapatinib in patients with metastatic, triple-negative breast cancer

description: Additional file 2. Independent Pathway Analysis details. This spreadsheet contains the data results from IPA.
DOI: 10.6084/m9.figshare.14168146.v1
title: Additional file 2 of An open-label, pilot study of veliparib and lapatinib in patients with metastatic, triple-negative breast cancer

description: Additional file 2. Independent Pathway Analysis details. This spreadsheet contains the data results from IPA.
DOI: 10.6084/m9.figshare.14168272
title: Additional file 3 of Prognostic value of the micronucleus assay for clinical endpoints in neoadjuvant radiochemotherapy for rectal cancer

description: Additional file 3: Suppl. Figure 3. a-b. There was no correlation between patient survival and lymphocyte cytogenetic damage. The Kaplan-Meier survival curves depict the cancer-specific survival (Suppl. Fig. 3a), the recurrence-free survival, the local recurrence-free survival, and the distant metastasis-free survival (Suppl. Fig. 3b). Patients were stratified according to the median of micronuclei (MN) or of nucleoplasmatic bridges (NPB), respectively, counted in binucleated lymphocytes (BNL/BL) after 50.4 Gy of radiochemotherapy (RCT). The endpoint for cancer-specific survival was any death related to tumor recurrence. Significance tests were performed using the Cox proportional hazards model.
DOI: 10.6084/m9.figshare.14168272.v1
title: Additional file 3 of Prognostic value of the micronucleus assay for clinical endpoints in neoadjuvant radiochemotherapy for rectal cancer

description: Additional file 3: Suppl. Figure 3. a-b. There was no correlation between patient survival and lymphocyte cytogenetic damage. The Kaplan-Meier survival curves depict the cancer-specific survival (Suppl. Fig. 3a), the recurrence-free survival, the local recurrence-free survival, and the distant metastasis-free survival (Suppl. Fig. 3b). Patients were stratified according to the median of micronuclei (MN) or of nucleoplasmatic bridges (NPB), respectively, counted in binucleated lymphocytes (BNL/BL) after 50.4 Gy of radiochemotherapy (RCT). The endpoint for cancer-specific survival was any death related to tumor recurrence. Significance tests were performed using the Cox proportional hazards model.
DOI: 10.6084/m9.figshare.14168305
title: Additional file 5 of Comparative outcome analysis of bleb needling of fibrotic blebs in the clinic versus the operating room: a retrospective case series

description: Additional file 5.
DOI: 10.6084/m9.figshare.14168305.v1
title: Additional file 5 of Comparative outcome analysis of bleb needling of fibrotic blebs in the clinic versus the operating room: a retrospective case series

description: Additional file 5.
DOI: 10.6084/m9.figshare.14168311
title: Additional file 1 of A comparative analysis of heart microRNAs in vertebrates brings novel insights into the evolution of genetic regulatory networks

description: Additional file 1 Supplementary data in xls format.