cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/7ycgb-fy381
title: FtsZG109SFzlC double o/e

description: division site
description: <strong>Tilt Series Date:</strong> 2008-12-01</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Strain EG426 was constructed by Erin Goley, data collected and processed by Zhuo Li</p>
<strong>Sample Preparation:</strong> The cell was first induced by vanillate (FtsZG109S) for 3 hours and then added with xylose (FzlC). The objective was to see how FzlC modulates preformed FtsZ filaments in the background of overexpressed FtsZG109S filaments.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2008-12-01-10/rawdata/</p>FtsZ109FzlCoebx9812020834K200e001.st,  Tilt Series (Pixel Size 0.644 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2008-12-01-10/rawdata/FtsZ109FzlCoebx9812020834K200e001.st"
        > <i class="download icon"></i> Download </a></p>

        FtsZ109FzlCoebx9812020834K200e0011K.rec,  Reconstruction (Pixel Size 1.288 nm), 329.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2008-12-01-10/3dimage_3868/FtsZ109FzlCoebx9812020834K200e0011K.rec"
        > <i class="download icon"></i> Download </a></p>

        FtsZ109FzlCoebx9812020834K200e0011K_full.rec,  Reconstruction (Pixel Size 1.288 nm), 855.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2008-12-01-10/3dimage_3869/FtsZ109FzlCoebx9812020834K200e0011K_full.rec"
        > <i class="download icon"></i> Download </a></p>

        dbFtsZ109FzlCoebx9812020834K200e0011K.mrc,  Reconstruction (Pixel Size 1.288 nm), 329.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2008-12-01-10/3dimage_3882/dbFtsZ109FzlCoebx9812020834K200e0011K.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/etbaa-3j563
title: Hn limited in thiosulfate - t0

description: H. neapolitanus cell h4 limited in thiosulfate - t0
description: <strong>Tilt Series Date:</strong> 2006-04-11</p>
<strong>Data Taken By:</strong> Cristina Iancu</p>
<strong>Species / Specimen:</strong> Halothiobacillus neapolitanus</p>
<strong>Strain:</strong> c2</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -14.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> </p>
<strong>Purification / Growth Conditions / Treatment:</strong> growth limited in thiosulfate - t0</p>
  civ2006-04-11-6_slicer6606.jpg: External Vesicle civ2006-04-11-6_slicer6608.jpg: Peptidoglycan civ2006-04-11-6_slicer6609.jpg: filament civ2006-04-11-6_slicer6611.jpg: filament civ2006-04-11-6_slicer6613.jpg: filament
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2006-04-11-6/rawdata/</p>h4_Hncellst0_160e_14um_april11_06.mrc,  Tilt Series (Pixel Size 1.2 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2006-04-11-6/rawdata/h4_Hncellst0_160e_14um_april11_06.mrc"
        > <i class="download icon"></i> Download </a></p>

        h4_0h_160e_14um.rec,  Reconstruction (Pixel Size 1.2 nm), 491.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2006-04-11-6/3dimage_4190/h4_0h_160e_14um.rec"
        > <i class="download icon"></i> Download </a></p>

        h4_0h_160e_14um_ali.mov,  file associated to 3D Image #4190, 10.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2006-04-11-6/file_2212/h4_0h_160e_14um_ali.mov"
        > <i class="download icon"></i> Download </a></p>

        h4_0h_160e_14um_rec_10ave.mov,  file associated to 3D Image #4190, 28.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2006-04-11-6/file_2213/h4_0h_160e_14um_rec_10ave.mov"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zehf3-f9z28
title: EIAV cores

description: EIAV cores, dual axis c, total dose 120 e/A2
description: <strong>Tilt Series Date:</strong> 2005-05-19</p>
<strong>Data Taken By:</strong> Elizabeth Wright</p>
<strong>Species / Specimen:</strong> EIAV cores</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Dual Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: 8.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> </p>
<strong>Collaborators and Roles:</strong> N/A</p>
<strong>Purification / Growth Conditions / Treatment:</strong> prepared by the Sundquist lab</p>
<strong>Sample Preparation:</strong> R0.6/1 quantifoil, 10 nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ewr2005-05-19-3/rawdata/</p>cores_20050519_c_pos5-.mrc,  Tilt Series (Pixel Size 5.6 nm), 268.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ewr2005-05-19-3/rawdata/cores_20050519_c_pos5-.mrc"
        > <i class="download icon"></i> Download </a></p>

        cores_20050519_c_pos5+.mrc,  Tilt Series (Pixel Size 5.6 nm), 293.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ewr2005-05-19-3/rawdata/cores_20050519_c_pos5+.mrc"
        > <i class="download icon"></i> Download </a></p>

        cores_20050519_c_pos6-.mrc,  Tilt Series (Pixel Size 5.6 nm), 277.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ewr2005-05-19-3/rawdata/cores_20050519_c_pos6-.mrc"
        > <i class="download icon"></i> Download </a></p>

        cores_20050519_c_pos6+.mrc,  Tilt Series (Pixel Size 5.6 nm), 268.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ewr2005-05-19-3/rawdata/cores_20050519_c_pos6+.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/3z3vc-c4509
title: MEFs-Chan Lab

description: MefB cell line from O. Loson in Chan Lab
description: <strong>Tilt Series Date:</strong> 2012-01-05</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> Murine embryonic fibroblast (MEFs)</p>
<strong>Strain:</strong> Primary cells</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> Mefs from Chan Lab</p>
<strong>Purification / Growth Conditions / Treatment:</strong> whole cells grown on grids</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-3/3dimage_68791/</p>12jan05_AT1BT1_0003_full.rec,  Reconstruction (Pixel Size 2.0 nm), 910.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-3/3dimage_68791/12jan05_AT1BT1_0003_full.rec"
        > <i class="download icon"></i> Download </a></p>

        12jan05_AT1BT1_0003.st,  Tilt Series (Pixel Size 0.5 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-3/rawdata/12jan05_AT1BT1_0003.st"
        > <i class="download icon"></i> Download </a></p>

        12jan05_AT1BT1_0003_full2.tiff,  file associated to 3D Image #68791, 1.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-3/file_15987/12jan05_AT1BT1_0003_full2.tiff"
        > <i class="download icon"></i> Download </a></p>

        12jan05_AT1BT1_0003_full.tiff,  file associated to 3D Image #68791, 1.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2012-01-05-3/file_15986/12jan05_AT1BT1_0003_full.tiff"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.g5wn28
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Anguilla anguilla",
 "Country is Myanmar",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036341-250811113504898/datasets/export for details.
DOI: 10.22002/c56j6-07x52
title: MP PrpC 27.5KX

description: Mycoplasma pneumonia PrpC mutant
description: <strong>Tilt Series Date:</strong> 2009-10-17</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Mycoplasma pneumoniae</p>
<strong>Strain:</strong> None</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> data collected by Jian; processed by Jian</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
  jsa2009-10-17-5_slicer13234.jpg: Attachment Organelle jsa2009-10-17-5_slicer13235.jpg: Attachment Organelle jsa2009-10-17-5_slicer13236.jpg: Attachment Organelle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-10-17-5/rawdata/</p>09oct17a_Box338B_005.mrc,  Tilt Series (Pixel Size 0.774 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-10-17-5/rawdata/09oct17a_Box338B_005.mrc"
        > <i class="download icon"></i> Download </a></p>

        09oct17a_Box338B_005_full.rec,  Reconstruction (Pixel Size 1.548 nm), 367.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-10-17-5/3dimage_17005/09oct17a_Box338B_005_full.rec"
        > <i class="download icon"></i> Download </a></p>

        09oct17a_Box338B_005_1k.rec,  Reconstruction (Pixel Size 0.0 nm), 109.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-10-17-5/3dimage_55900/09oct17a_Box338B_005_1k.rec"
        > <i class="download icon"></i> Download </a></p>

        09oct17a_Box338B_005_SIRT.rec,  Reconstruction (Pixel Size 0.0 nm), 524.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-10-17-5/3dimage_55901/09oct17a_Box338B_005_SIRT.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/x91cd-5sv81
title: T. intermedia autotrophic 4 hrs

description: T. intermedia cell h5 grown in autotrophic conditions for 4 hours
description: <strong>Tilt Series Date:</strong> 2007-11-27</p>
<strong>Data Taken By:</strong> Cristina Iancu</p>
<strong>Species / Specimen:</strong> Thiomonas intermedia</p>
<strong>Strain:</strong> K12</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (0.0°, 0.0°), step: °, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -13.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Purification / Growth Conditions / Treatment:</strong> growth in autotrophic conditions for 4 hours</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-11-27-1/rawdata/</p>Ti_a4h_h5_160e13um18K_27nov07.mrc,  Tilt Series (Pixel Size 1.259 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-11-27-1/rawdata/Ti_a4h_h5_160e13um18K_27nov07.mrc"
        > <i class="download icon"></i> Download </a></p>

        Ti_a4h_h5_160e13um18K_27nov07_bin2.rec,  Reconstruction (Pixel Size 0.0 nm), 59.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-11-27-1/3dimage_3945/Ti_a4h_h5_160e13um18K_27nov07_bin2.rec"
        > <i class="download icon"></i> Download </a></p>

        Ti_a4h_h5_160e13um18K_27nov07_bin2_s88.tif,  991.1 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/civ2007-11-27-1/file_1597/Ti_a4h_h5_160e13um18K_27nov07_bin2_s88.tif"
        > <i class="download icon"></i> Download </a></p>

        civ2007-11-27-1_slicer19164.png,  308.4 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/Caps/civ2007-11-27-1_slicer19164.png"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/mjd02-dp958
title: Wild type w/o iron

description: Raw data files of Wild type w/o iron
description: <strong>Tilt Series Date:</strong> 2009-11-12</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum</p>
<strong>Strain:</strong> AMB-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach, IMOD</p>
<strong>Collaborators and Roles:</strong> Cells sent from Arash Komeili, data collected by ZL.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> (Could be) Stationary phase</p>
<strong>Sample Preparation:</strong> Quantifoil R2/1 or R2/2, 10nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-12-49/rawdata/</p>09nov12a_wtnofe_049.mrc,  Tilt Series (Pixel Size 1.192 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-12-49/rawdata/09nov12a_wtnofe_049.mrc"
        > <i class="download icon"></i> Download </a></p>

        09nov12a_wtnofe_049_full.rec,  Reconstruction (Pixel Size 2.384 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-12-49/3dimage_9876/09nov12a_wtnofe_049_full.rec"
        > <i class="download icon"></i> Download </a></p>

        09nov12a_wtnofe_049a.mrc,  Reconstruction (Pixel Size 2.384 nm), 786.7 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-12-49/3dimage_9877/09nov12a_wtnofe_049a.mrc"
        > <i class="download icon"></i> Download </a></p>

        09nov12a_wtnofe_049.tif,  233.1 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-12-49/file_2780/09nov12a_wtnofe_049.tif"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/zg788-0tg39
title: Agrobacterium tumefaciens C1

description: Wild type, no T4SS
description: <strong>Tilt Series Date:</strong> 2014-02-01</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
<strong>Collaborators and Roles:</strong> Pat Zambryski</p>
<strong>Purification / Growth Conditions / Treatment:</strong> liquid LB</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-01-15/rawdata/</p>c1_60004.mrc,  Tilt Series (Pixel Size 0.4 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-01-15/rawdata/c1_60004.mrc"
        > <i class="download icon"></i> Download </a></p>

        c1_60004_part121_59.rec,  Reconstruction (Pixel Size 0.0 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-01-15/3dimage_49220/c1_60004_part121_59.rec"
        > <i class="download icon"></i> Download </a></p>

        slicer000.tif,  2.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-01-15/file_10960/slicer000.tif"
        > <i class="download icon"></i> Download </a></p>

        slicer001.tif,  2.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-02-01-15/file_10961/slicer001.tif"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/grdpf-pzs81
title: Purified HIV-1 capsid-Ruby

description: Raw data files of Purified HIV-1 capsid-Ruby
description: <strong>Tilt Series Date:</strong> 2020-10-27</p>
<strong>Data Taken By:</strong> Stephen Carter</p>
<strong>Species / Specimen:</strong> HIV-1 pseudovirus</p>
<strong>Strain:</strong> pHIV-CAru3</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -10.0 μm,  magnification: 33000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> IMOD</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-10-27-6/rawdata/</p>tomo13.mrc,  Tilt Series (Pixel Size 2.65 nm), 2.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-10-27-6/rawdata/tomo13.mrc"
        > <i class="download icon"></i> Download </a></p>

        tomo13_part52_13.rec,  Reconstruction (Pixel Size 10.6 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-10-27-6/3dimage_116856/tomo13_part52_13.rec"
        > <i class="download icon"></i> Download </a></p>

        tomo13_full.rec,  Reconstruction (Pixel Size 0.0 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/scd2020-10-27-6/3dimage_118566/tomo13_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/q6zr4-nw351
title: V. cholerae

description: for MSHA pili
description: <strong>Tilt Series Date:</strong> 2016-01-04</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -6.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> SIRT</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2016-01-04-65/3dimage_73074/</p>20160104_Vcholerae_MSHA_10065_SIRT_2K.rec,  Reconstruction (Pixel Size 0.0 nm), 7.1 GB  
        
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        20160104_Vcholerae_MSHA_10065_full.rec,  Reconstruction (Pixel Size 1.56 nm), 534.5 MB  
        
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        20160104_Vcholerae_MSHA_10065.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.4 GB  
        
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