cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.1838/1
title: Delsuc2003MolPhyloGenetEvol.nex
DOI: 10.5061/dryad.8338/1
title: Denoeud-Science2010_4genes_aa_probcons_gblocks

description: Amino acid concatenation of the 4 most conserved mitocondrial genes (COX1, COX2, COX3, CYTB) for 60 metazoans.
DOI: 10.5061/dryad.8338/2
title: Denoeud-Science2010_4genes_aa_probcons_gblocks_CAT-GTR

description: Bayesian consensus tree obtained under the CAT-GTR mixture model implemented in Phylobayes using the amino acid alignment of the 4 most conserved mitochondrial genes (COX1, COX2, COX3, CYTB).
DOI: 10.5061/dryad.b22430s2/1
title: Supplementary_Information

description: Supplementary information (alignments) for analyses reported in the manuscript
DOI: 10.5061/dryad.ck770/3
title: ATPS Phylogeography alignment

description: Complete alignment used for the nuclear haplotype network.
DOI: 10.5061/dryad.ck770/4
title: RAPD primers

description: File containing the primer names for the RPD study, as well as their loci and the size of the product scored in the analysis.
DOI: 10.5061/dryad.1694/1
title: SuppFigure3replyGID.pdf

description: Supplementary figure 3 to the reply to GID: BASTA resistance tests on maize plants from the 2001 collection.
DOI: 10.5061/dryad.85g00/1
title: Subordinate co-foundress productivity
DOI: 10.5061/dryad.ck770/2
title: COI-16S Phylogeography alignment

description: Complete alignment used for the haplotype network. Base pair 1-425:COI, base pair 426-891:16S.
DOI: 10.5061/dryad.h5q66/3
title: rapid_heat_hardening_1
DOI: 10.5255/ukda-sn-6713-2
title: Scottish Health Survey, 2009
DOI: 10.5061/dryad.1050/1
title: H7 Australian Avian Influenza Supplemental Material
DOI: 10.5061/dryad.1cf5d/1
title: Ldayi_39-40

description: Alignment for Litoria dayi sequences less than 200 base pairs long at locus MVZ 39/40 X. laevis MGC82783 protein (Intron2).
DOI: 10.5061/dryad.1cf5d/2
title: Ldayi_CRYBA

description: Alignment for Litoria dayi sequences less than 200 base pairs long at locus Cryb1LS/Cryb2LS Beta-crystallin.
DOI: 10.5061/dryad.3mv8v434/1
title: MEC-11-1215_sequence_data_bc

description: Fasta file containing all unique sequences produced with the ewB/ewC primers
DOI: 10.5061/dryad.5dg56/1
title: OtolithGenotypes_bySamplingyear_11loci

description: Genepop input: Otolith genotypes (11 loci) grouped by sampling year:1950s (‘NS50’; sampling years 1957-1959), 1960s (‘NS60’; sampling years 1966-1967),1970s (‘NS70’, sampling years 1971-1974), 1980s (NS80, sampling years 1984-1985-1987) and 1995 (NS95) (For details on age composition of the samples, see Supporting Information Table S2). In addition, contemporary samples were collected in 2007 during research surveys off the Thames (THA07), on the Norfolk Banks (NOR07) and off the Belgian Coast (BEL07)
DOI: 10.5061/dryad.7930/2
title: archive of IMa2files

description: Archive contains 16 IMa2 input files. Eight files for analysis of eastern versus western populations and eight files for analysis of three populations (east v. NW v. SW). In each set, the files include the nCR locus and one of eight portions of the Enol locus. Indels are recoded as nucleotides.
DOI: 10.5061/dryad.9f8j2/1
title: Sample locations and microsatellite data of Aleppo pine in Mt. Pithulim study site
DOI: 10.5061/dryad.b13j1/1
title: Rasters associated with Sandel et al. 2011

description: This is the file originally uploaded by the author.
DOI: 10.5061/dryad.b13j1/2
title: Rasters associated with Sandel et al. 2011 -- converted

description: This version of the data file has undergone format conversion by a Dryad curator.
DOI: 10.5061/dryad.kg68d/1
title: assembly1

description: Assembly of Haloferax volcanii DS2 based on 454 FLX Titanium reads to 25x coverage, sequenced at Roche Inc.  The assembly was carried out by Roche Inc, using the newbler assembler
DOI: 10.5061/dryad.kg68d/2
title: assembly2

description: Assembly of Haloferax volcanii DS2 using 100nt paired-end Illumina reads and 50nt mate-pair reads with 6.5kbp insert size.
DOI: 10.5061/dryad.kg68d/3
title: assembly3

description: Assembly of Haloferax volcanii DS2 using 78nt paired-end Illumina reads and 50nt mate-pair reads with 6.5kbp insert size.  Assembly was computed using REPTILE error correction, IDBA assembler for contig generation, and SSPACE scaffolding.
DOI: 10.5255/ukda-sn-6340-1
title: British Household Panel Survey, Waves 1-18, 1991-2009: Secure Data Service Access, National Grid Reference (Easting, Northing, OSGRDIND)
DOI: 10.5255/ukda-sn-6721-1
title: Annual Population Survey, 2004-2010: Secure Data Service Access
DOI: 10.5255/ukda-sn-6727-1
title: Quarterly Labour Force Survey, 1992-2011: Secure Data Service Access
DOI: 10.5061/dryad.1862/1
title: bootstrapped-chimpanzee example xml file
DOI: 10.5061/dryad.1862/2
title: chimpanzee-plus example xml file
DOI: 10.5061/dryad.1862/3
title: chimpanzee-only example xml file
DOI: 10.5061/dryad.1920/1
title: DATApaperMOLECOL
DOI: 10.5061/dryad.1992/1
title: HFC_KP

description: Heterozygosity, survival, tarsus and mass growth of Kentish plover chicks hatched at Tuzla, Southern Turkey
DOI: 10.5061/dryad.1cf5d/10
title: Lserrata_29-30

description: Alignment of Litoria serrata sequences less than 200 base pairs long at locus MVZ29/MVZ30 Y Box Binding (Intron 1).
DOI: 10.5061/dryad.1cf5d/11
title: Lserrata_39-40

description: Alignment of Litoria serrata sequences less than 200 base pairs long at locus MVZ39/MVZ40 X. laevis MGC82783 protein (Intron2).
DOI: 10.5061/dryad.1cf5d/3
title: Ljungguy_19-20

description: Alignment of Litoria jungguy sequences less than 200 base pairs long at locus MVZ19/MVZ20 Myosin Light Chain (Intron 6).
DOI: 10.5061/dryad.1cf5d/4
title: Ljungguy_39-40

description: Alignment of Litoria jungguy sequences less than 200 base pairs long at locus MVZ39/MVZ40 X. laevis MGC82783 protein (Intron2).
DOI: 10.5061/dryad.1cf5d/5
title: Lnannotis_19-20

description: Alignment of Litoria nannotis sequences less than 200 base pairs long at locus MVZ19/MVZ20 Myosin Light Chain (Intron 6).
DOI: 10.5061/dryad.1cf5d/6
title: Lnannotis_29

description: Alignment of Litoria nannotis sequences less than 200 base pairs long at locus MVZ29/MVZ30 Y Box Binding (Intron 1).
DOI: 10.5061/dryad.1cf5d/7
title: Lnannotis_39-40

description: Alignment of Litoria nannotis sequences less than 200 base pairs long at locus MVZ39/MVZ40 X. laevis MGC82783 protein (Intron2).
DOI: 10.5061/dryad.1cf5d/8
title: Lrheocola_39-40

description: Alignment of Litoria rheocola sequences less than 200 base pairs long at locus MVZ39/MVZ40 X. laevis MGC82783 protein (Intron2).
DOI: 10.5061/dryad.1cf5d/9
title: Lserrata_19-20

description: Alignment of Litoria serrata sequences less than 200 base pairs long at locus MVZ19/MVZ20 Myosin Light Chain (Intron 6).
DOI: 10.5061/dryad.3mv8v434/2
title: MEC-11-1215_sequence_data_de

description: Fasta file containing all unique sequences produced with the ewD/ewe primers
DOI: 10.5061/dryad.3mv8v434/3
title: MEC-11-1215_filtered_data_bc

description: Text file showing the filtered data produced by primers ewB/ewC.
DOI: 10.5061/dryad.3mv8v434/4
title: MEC-11-1215_filtered_data_de

description: Text file showing the filtered data produced by primers ewD/ewE.
DOI: 10.5061/dryad.9m925/2
title: Fitness-measures

description: Fitness measures used in maximum likelihood procedure.
DOI: 10.5061/dryad.b779h/1
title: Vittecoq-et-al_Evolutionary-Biology

description: 1. Ant behavioural reaction to stimuli presented at the entrance of the domatium for 3 minutes.2. Ant behavioural reaction to leaflet damage and pure compounds, using the paired-leaves protocol.3. Quantification of leaf compounds. Leaflets of three taxa of Leonardoxa africana (subspp. africana, letouzeyi and gracilicaulis) were soaked in hexane for 30 minutes. 2.9 µg of nonane was added to each sample as an internal standard. Amounts of (E)-2-hexenal and methyl salicylate were determined by gas chromatography / mass spectroscopy.4. Antennal responses of ants (measured by electroantennography) to compounds.5. Antennal responses of ants (measured by electroantennography) to increasing amounts of compounds.
DOI: 10.5061/dryad.h5q66/4
title: rapid_heat_hardening_repeated
DOI: 10.5061/dryad.1cf5d/12
title: Lserrata_CRYBA

description: Alignment of Litoria serrata sequences less than 200 base pairs long at locus Cryb1LS/Cryb2LS beta-crystallin.
DOI: 10.5061/dryad.7926/3
title: mating

description: Mate-choice data.  The Male and Female columns contain identifiers for individuals used in the trials.  Pairing denotes whether a potential couple in a given trial belong to the same or different demes.  Rep.Suc denotes which male mated with the female in a given trial, and Suc.Mate denotes whether the successful male was from the same deme as the female.  M.Pop and F.Pop denote the site of origin of the male and female, respectively.  Env denotes the salinity of the test environment.  M.Env and F.Env denote whether the test environment was representative of the native salinity of the male and female, respectively.  TL and SL denote total and standard length, in mm, of each meal.  Wt denotes the weight, in grams, of each male; whereas k denotes condition factor.  M.AA and F.AA denote the number of unique MHC peptides for each male and female, respectively.  Shared.AA denotes the number of MHC peptides in common between a potential couple in a given trial.  M.Uniq.AA denotes the number of MHC peptides a male posses which differ from the female in a given trial.  Comb.AA denotes the total number of unique MHC peptides between a male and female in a given trial.  M.AA.Dist denotes the average intra-individual protein distance of each male.  Pair.AA.Dist denotes the average pair-wise protein distance between a potential couple in a given trial.
DOI: 10.5061/dryad.7957/1
title: data.files

description: Description of the 4 data files:All files are tables into a text files and are comma delimited.The files “merus.txt” and “propodus.dactylus.txt” represent the superimposed coordinates for the raptorial appendages (the merus and the propodus/dactylus respectively). They include animal ID, appendage side, measurement replicates, centroid size, and X and Y coordinate for each landmarks and semi-landmarks.The file “individuals.informations.txt” includes the animal ID, the sex, the animal total body length and the strike force. Some animals do not have a strike force and have “NA” instead. The file “spring.contraction.data.txt” includes all the data relative to the spring section of the article. This is the sex of the animals, the spring force when maximally contracted, the spring stiffness, the animal total body length, the centroid size and the superimposed coordinate (X and Y) for each landmarks and semi-landmarks.
DOI: 10.5061/dryad.9100/4
title: TreeBASE S11439
DOI: 10.5061/dryad.bq002/1
title: Jennings_POC_PopInfo

description: This comma-delimited file provides location and genotype data for individuals from four populations of Oregon Port-Orford cedar that were surveyed with 11 microsatellite loci. The file shows individual numbers, population names,population latitudes, population longitudes, and the microsatellite allele length for diploid loci. Missing genotypes are indicated by the value "0, 0".
DOI: 10.5061/dryad.bq002/2
title: Jennings_POC_PrimerSeqs

description: This comma-delimited file provides information for 144 primers that were screened the Port-Orfordpopulations. Included are the primer name, forward and reverse primer sequence, the original sequence name from Illumina sequencing, and the nucleotide sequence of the microread (2 x 80 bp, with read 1 and read 2 separated by 8 N's).
DOI: 10.5061/dryad.jq989/1
title: MOTUs - nematode diversity in a lowland tropical rainforest

description: Sequence data. See ReadMe file for details.
DOI: 10.5061/dryad.n9r3h/2
title: 16S.T

description: This zip file contains the alignments and trees reported in our paper for the 16S.T dataset from Robin Gutell.  Please see the readme.txt file for additional information on individual alignments and trees.
DOI: 10.5061/dryad.1358/2
title: GlossinaGUEQ_Gpp_GENEPOP.txt
DOI: 10.5061/dryad.6th24/2
title: Dryad_Sabal_134_148
DOI: 10.5061/dryad.8085/1
title: newcompseq

description: There is more information in the Pipeline Readme but here is information specific to this program: 1) Blast all the individual 454 reads from the genome to the known drosophila genome assemblies available. In my case I BLASTed each of 4 different files filled with genomic DNA from 4 different Drosophila species to the genomes of Drosophila pseudoobscura pseudoobscura and drosophila persimilis.	The program I used to do this analysis is called newcompseq.plx. I wanted to run the program in parallel so I had to rename some of the temporary files that it opens. The 454 sequence reads that do not align to either one of the genomes are interesting. These interesting sequences are output to the designated file.
DOI: 10.5061/dryad.8085/2
title: bogotana

description: 2) I BLASTed all the interesting sequences in the output from newcompseq.plx to NCBI's database to see what these strange sequences align to. The program I used to run this was specific to the species I was analyzing. For example the strange sequences in Drosophila miranda's set of 454 reads were BLASTed to NCBI using a program called miranda.pl.
DOI: 10.5061/dryad.8085/3
title: miranda

description: 2) I BLASTed all the interesting sequences in the output from newcompseq.plx to NCBI's database to see what these strange sequences align to. The program I used to run this was specific to the species I was analyzing. For example the strange sequences in Drosophila miranda's set of 454 reads were BLASTed to NCBI using a program called miranda.pl.
DOI: 10.5061/dryad.8085/5
title: pseudo

description: 2) I BLASTed all the interesting sequences in the output from newcompseq.plx to NCBI's database to see what these strange sequences align to. The program I used to run this was specific to the species I was analyzing. For example the strange sequences in Drosophila miranda's set of 454 reads were BLASTed to NCBI using a program called miranda.pl.
DOI: 10.5061/dryad.8085/6
title: BlastStat

description: 3) The messy BLAST output is then parsed and analyzed by a program called BlastStat.pl.  This program gives some statistics on what these strange sequences aligned to. It isolates sequences that aligned to things that are not Drosophila or human and puts the output into a file ending in .stat. These strange sequences are placed into another file ending in .weird that is further analyzed. The .weird file actually  was made manually by eliminating all of the useful statistics at the top of the .stat files.
DOI: 10.5061/dryad.8197/2
title: RAWDATAgraphs

description: Graphs showing mean plant biomass of invasive, native congeneric and native heterogeneric plants grown alone or in competitition
DOI: 10.5061/dryad.n8963/1
title: Dipodomys_spectabilis_kinrec

description: Distances and kin relationships between known mothers and possible fathers of all bannertailed kangaroo rat offspring whose parents were determined by microsatellite genotyping, 1990-2008, Arizona: see Readme file.
DOI: 10.5061/dryad.8085/7
title: compWeird

description: 4) Then the .weird is used to BLAST all the weird sequences to one another to make sure there aren't  duplicates within my data set. The program I wrote to do this comparison is called compWeird.plx.  compWeird.plx takes longer than you think to finish, so I left myself some time to do this step. compWeird.plx produces a file ending in .single that identifies which sequences are duplicates and which are not.
DOI: 10.5061/dryad.8085/8
title: dupEliminate

description: 5) In order to eliminate the duplicates, I used a program called dupEliminate.pl. This program finds duplicates and choses the longest sequence of that duplicate. This longest sequence is then put into a file ending in .noDupSeqs.
DOI: 10.5061/dryad.8085/9
title: weirdStat

description: 6) All the species that aligned to something strange are then summarized by a program called weirdStat.pl which produces a file ending in .speciesSummary. This program looks for things like which species were found the most often and which were identified only once or twice.
DOI: 10.5061/dryad.8164/3
title: Data of Fig.3

description: The estimated number of replicates and the reduction in the number of replicates of heterozygotes and homozygotes using multiple-steps method at the 99% confidence level. 

Sheet1 are the estimated numbers of replicates of heterozygotes.
Sheet1 are the estimated numbers of replicates of homozygotes.
Sheet3 and Sheet4 are selected genotyping approaches.
DOI: 10.5061/dryad.8164/4
title: Calculation Program of Fig.3 (win32 application)

description: Calculation Program of Fig.3 (win32 application compiled with Visual Studio 2008)
DOI: 10.5061/dryad.b02h0/2
title: Appendix S2 10062 AM DUNHILL

description: Appendix S2 referenced in article.
DOI: 10.5061/dryad.b02h0/3
title: Appendix S3 10062 AM DUNHILL

description: Appendix S3 referenced in article.
DOI: 10.5255/ukda-sn-5828-2
title: Households Below Average Income, 1994/95-2009/10
DOI: 10.5255/ukda-sn-6691-1
title: Social Participation and Identity, 2007-2010: Combining Quantitative Longitudinal Data with a Qualitative Investigation of a Sub-Sample of the 1958 National Child Development Study
DOI: 10.5061/dryad.8577/1
title: Tseng&Wang_Paleobiology10007_SI

description: Supplementary Information for Tseng and Wang. Contains list of specimens used in the study.
DOI: 10.5061/dryad.b02h0/4
title: Appendix S4 10062 AM DUNHILL

description: Appendix S4 referenced in article.
DOI: 10.5061/dryad.b02h0/5
title: 10062 AM DUNHILL RAW DATA

description: Remote sensing and GIS data used in the study. Including outcrop area, exposure area, lithology, elevation, bedrock age etc.
DOI: 10.5061/dryad.gg0jm/1
title: DataForDryad_Lepais&Bacles-JOH-2011

description: Genepop file of the microsatellite data from 36 Alnus glutinosa (pop1), two Alnus incana (pop2), two Alnus cordata (pop3) and some repeated genotyping (pop4).
DOI: 10.5061/dryad.h58q6/1
title: Convergence in Sabertooths Appendix 1

description: Appendix 1: Measurements of species used in this study
DOI: 10.5061/dryad.h58q6/2
title: Convergence in Sabertooths Appendix 2

description: Appendix 2: List of all specimens used in this project.
DOI: 10.5061/dryad.0pm3v/3
title: Morphology

description: Morphological data: body mass (g) and tarsus-length (mm)
DOI: 10.5061/dryad.1914/1
title: Blackburn_et_al_2010_PLoSONE_Barbourula

description: Nexus file of aligned DNA sequence data containing partitions by codon position (by gene) and taxon sets.
DOI: 10.5061/dryad.38d8k/1
title: ReedCanaryDryad

description: Emergence Time, tiller height at 78 days, tiller number at 78 days, above ground dry weight, root weight, and total dry weight for reed canarygrass clones grown in greenhouse conditions. Original plants collected from native European (Czech Republic and France) and invasive North American (Vermont and North Carolina) populations. For full description see Lavergne and Molofsky (2007).
DOI: 10.5061/dryad.7908/1
title: DATA MOL ECOLOGY JOURNAL

description: ** This file contains errors. A corrected version can be found at http://dx.doi.org/10.5061/dryad.7908/5 **  This file contains the multilocus genotypes (7 microsatellite loci) of Pocillopora from the Eastern Pacific. In addition, ORF. and ITS types as well as identity of the symbiont and information on each sample
DOI: 10.5061/dryad.7933/2
title: GenBank_Lepidoptera_MLepR1

description: Sequences for MLepR1 primer binding site in 2711 species of Lepidoptera as retrieved from GenBank on Sep.2010 (via BOLD)
DOI: 10.5061/dryad.8029/1
title: Sequence alignments

description: .zip file contains aligned sequence data from which SNPs were identified and assays were created.
DOI: 10.5061/dryad.1884/1
title: Microsatellite data of the Atlantic Forest jaguar populations

description: Microsatellite data of the four jaguar populations studied in Atlantic Forest.
DOI: 10.5061/dryad.1968/1
title: DatasetS1

description: Pileup files, sequence files, and genotype information from chimpanzee fecal and blood samples (see ReadMe file)
DOI: 10.5061/dryad.1989/1
title: measurements in Turnera flowers

description: Include petal legth and nectar production data from 319 flowers (57 plants), used to estimate signal accuracy for each individual plants.
DOI: 10.5061/dryad.1989/2
title: selection in Turnera ulmifolia

description: Include morphological and reproductive success data from 57 Turnera ulmifolia plants used to estimate phenotypic selection on flower number, mean nectar production rate, mean petal lenght and signal accuracy.
DOI: 10.5061/dryad.7933/4
title: List of 297 wasp records for primer test

description: List of the 297 wasp samples used to test for amplification success of primer MLepR1 in parasitoid wasps.
DOI: 10.5061/dryad.8083/1
title: Svetec et al

description: R input file for QTL analysis:1 column: ID of fly line,2 column: female CCRT,3 column: male CCRT,4-26 column: Genotype (African=2, European=0),1 row: female, male, marker ID (25-444),2 row: Chromosome ID (X),3 row: Marker position in cM (for actual position in base pairs see Supplementary Table 1)
DOI: 10.5061/dryad.9096/1
title: microsatellite data of red pandas
DOI: 10.5061/dryad.cb5622n4/1
title: Shin_SupMat_Table 1

description: Supplementary Table 1. Sex ratios among BC2 progeny from crosses of RED strain females mated with BC1 males from crosses between T37 strain males and RED strain females.
DOI: 10.5255/ukda-sn-6877-1
title: Motivated Identity Construction in Cultural Context, 2008-2011
DOI: 10.5255/ukda-sn-6884-1
title: Adult Dental Health Survey, 2009
DOI: 10.5255/ukda-sn-6886-1
title: Family Resources Survey, 2009-2010