cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.3624290_d3
title: Additional file 1: Table S1. of Comprehensive analysis of the fecal microbiota of healthy Japanese adults reveals a new bacterial lineage associated with a phenotype characterized by a high frequency of bowel movements and a lean body type

description: English translation of the lifestyle questionnaire and the scoring system used for each question. Table S2. Subject characteristics and the results of the Illumina sequencing. Table S3. Operational taxonomic unit table for the whole subjects (% in whole reads). Table S4. Basic Local Alignment Search Tool (BLAST) results and representative sequences for the operational taxonomic units. Table S5. Abundance and prevalence of the 66 identified bacterial families and alpha-diversity scores stratified by area of residence. Table S6. Abundance and prevalence of the 66 identified bacterial families and alpha-diversity scores stratified by gender. Table S7. Abundance and prevalence of the 66 identified bacterial families and alpha-diversity scores in the two clusters identified in the male subjects. Table S8. Raw questionnaire data. Table S9. Questionnaire scores stratified by area of residence. Table S10. Questionnaire scores stratified by gender. Table S11. Questionnaire scores in the two clusters identified in the male subjects. Table S12. Detailed Basic Local Alignment Search Tool (BLAST) search results for the operational taxonomic units shown in TableÂ 8. Table S13. Quantitative Insights Into Microbial Ecology (QIIME) bioinformatics pipeline scripts used in the present study. (XLSX 8232Â kb)
DOI: 10.6084/m9.figshare.c.3624302_d1
title: Additional file 4: of Forecasting Chikungunya spread in the Americas via data-driven empirical approaches

description: Air traffic data used to estimate passenger flow among countries in the Americas. The table includes direct flights between countries with no stops, flights with one or two stops for flight connections, and a summary of total estimated number of passengers between countries in the Americas. (CSV 108Â kb)
DOI: 10.15468/dl.9nn3yw
title: Occurrence Download

description: A dataset containing 55873 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Aedes aegypti (Linnaeus, 1762)"
 ]
}

 The dataset includes 55873 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033226-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3624335_d1
title: Additional file 1: of A comparative analysis of vaccine administration in urban and non-urban skilled nursing facilities

description: Customized database used in this study. (XLSX 2173Â kb)
DOI: 10.6084/m9.figshare.c.3624347_d1
title: Additional file 1: of Fluid responsiveness prediction using Vigileo FloTrac measured cardiac output changes during passive leg raise test

description: Study dataset. (CSV 8 kb)
DOI: 10.6084/m9.figshare.c.3624359_d1
title: Additional file 1: of Whole-genome optical mapping reveals a mis-assembly between two rRNA operons of Corynebacterium pseudotuberculosis strain 1002

description: C. pseudotuberculosis 1002 sequence placement. This XML file contains the restriction site positions used to the sequence placements by MapSolver™. (XML 88 kb)
DOI: 10.6084/m9.figshare.28023824
title: VrTCP

description: CDS and protein sequences of the mung bean TCP gene family
DOI: 10.15468/dl.b9heq5
title: Occurrence Download

description: A dataset containing 169 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Aedes africanus (Theobald, 1901)"
 ]
}

 The dataset includes 169 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033227-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3624413_d1
title: Additional file 12: of Close ecological relationship among species facilitated horizontal transfer of retrotransposons

description: HTT transcriptsâ   expression change in two BioProjects. (XLSX 24 kb)
DOI: 10.6084/m9.figshare.c.3624416_d1
title: Additional file 3: Table S2. of Metabolic consequences of inflammatory disruption of the blood-brain barrier in an organ-on-chip model of the human neurovascular unit

description: Tentative structural identifications. (XLSX 69 kb)
DOI: 10.6084/m9.figshare.c.3624344_d14
title: Additional file 23: of Molecular foundations of chilling-tolerance of modern maize

description: Possible functions and cellular localization of products of genes specific to S50676 inbred line. (XLSX 92 kb)
DOI: 10.15468/dl.gkczwe
title: Occurrence Download

description: A dataset containing 111560 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Balaenoptera physalus (Linnaeus, 1758)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 111560 records from 424 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033215-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3624344_d15
title: Additional file 24: of Molecular foundations of chilling-tolerance of modern maize

description: Possible functions and cellular localization of products of genes specific to S160 inbred line. (XLSX 168 kb)
DOI: 10.6084/m9.figshare.c.3624413_d2
title: Additional file 2: of Close ecological relationship among species facilitated horizontal transfer of retrotransposons

description: Longest protein sequences of 10 L. vannamei TE families. (FASTA 10 kb)
DOI: 10.15468/dl.vju2u4
title: Occurrence Download

description: A dataset containing 743 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cuon alpinus (Pallas, 1811)"
 ]
}

 The dataset includes 743 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033228-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3624413_d13
title: Additional file 14: of Close ecological relationship among species facilitated horizontal transfer of retrotransposons

description: GenBank accession numbers of protein sequences used for phylogenetic analyses. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3624413_d14
title: Additional file 16: of Close ecological relationship among species facilitated horizontal transfer of retrotransposons

description: Detailed information of two NCBI BioProjects, PRJNA253518 and PRJNA233549. (XLSX 29 kb)
DOI: 10.6084/m9.figshare.c.3624413_d16
title: Additional file 15: of Close ecological relationship among species facilitated horizontal transfer of retrotransposons

description: Multiple sequence alignments used for phylogenetic analyses. (ZIP 546 kb)
DOI: 10.6084/m9.figshare.c.3624458_d2
title: Additional file 2 of Genome-wide analysis of chemically induced mutations in mouse in phenotype-driven screens

description: Genes potentially not covered by germ line ENU approaches. MGI names and location of genes overlapping H3K27me3 histone marks, which are considered closed genomic areas and hence potentially not targeted by ENU mutations that need to be passed on through the germ line. (TXT 379 kb)
DOI: 10.6084/m9.figshare.c.3624464_d1
title: Additional file 1: of Genome-wide evolutionary and functional analysis of the Equine Repetitive Element 1: an insertion in the myostatin promoter affects gene expression

description: Table S1.A lists the 45,713 loci identified using the ERE1 consensus sequence deposited at the RepBase database as query for a BLAST search against the horse genome reference sequence. Table S1B reports the 34,131 ERE1 loci with sizes similar to the ERE1 consensus (225 ± 10 bp) and with minimum identity to the consensus of 84 %. Table S1.C lists the 27,396 ERE1 loci that are not located inside other repetitive elements. (XLSX 3293 kb)
DOI: 10.6084/m9.figshare.c.3624479_d1
title: MOESM5 of Anti-malarial effect of semi-synthetic drug amitozyn

description: Additional file 5. Drug reduction index of amitozyn/pyrimethamine and pyrimethamine/amitozyn combinations.
DOI: 10.6084/m9.figshare.c.3624524_d1
title: Additional file 1: of Rubella immune status of neonates â   a window towards seroprevalence among childbearing women

description: Serology results with basic demographic and clinical data for the studied population. (XLSX 106 kb)
DOI: 10.6084/m9.figshare.c.3624539_d2
title: Additional file 1: Table S1. of The first whole genome and transcriptome of the cinereous vulture reveals adaptation in the gastric and immune defense systems and possible convergent evolution between the Old and New World vultures

description: Sequencing and analysis statistics of the cinereous vultureâ  s WGS relative to the bald eagle genome. Table S2 17-mer statistics. Table S3 Summary of SNVs and small indel in the cinereous vulture. Table S4 PSGs list of the Accipitrimorphae using a branch-site model. Table S5 PSGs list of the Accipitrimorphae using a branch model. Table S6 Functional annotation chart of PSGs of the Accipitrimorphae. Table S7 PSGs list of the cinereous vulture using a branch-site model. Table S8 PSGs list of the cinereous vulture using a branch model. Table S9 PSGs list of the turkey vulture using a branch-site model. Table S10 PSGs list of the turkey vulture using a branch model. Table S11 Functional annotation chart of PSGs of the cinereous vulture. Table S12 Functional annotation chart of PSGs of the turkey vulture. Table S13 Unique amino acid changes of the turkey vulture. Table S14 Unique amino acid changes of the cinereous vulture Table S15 Unique amino acid changes of the Accipitridae. Table S16 Unique amino acid changes on sites between Accipitridae and Cathartidae of the digestive system-related proteins. Table S17 Unique amino acid changes on sites between Accipitridae and Cathartidae of the gastric acid secretion-related proteins. Table S18 Statistics regarding whole-transcriptome sequences and unigene construction. Table S19 GO analysis for the blood transcriptome of the cinereous vulture. Table S20 KEGG pathway analysis for the blood transcriptome of the cinereous vulture. Table S21 Gene expression in the cinereous vulture compared to the other avian species. Table S22 Immune related genes expression in the cinereous vulture compared to the other avian species. (XLSX 635 kb)
DOI: 10.6084/m9.figshare.c.3624575_d3
title: Additional file 8: Table S2. of Temperature desynchronizes sugar and organic acid metabolism in ripening grapevine fruits and remodels their transcriptome

description: Differentially expressed transcripts with clusters identified by time series analysis. (XLSX 589Â kb)
DOI: 10.6084/m9.figshare.c.3624593_d2
title: Additional file 1: Table S1. of Metabolic gene expression profile in circulating mononuclear cells reflects obesity-associated metabolic inflexibility

description: Macronutrient composition of liquid mixed meals. (XLSX 9Â kb)
DOI: 10.6084/m9.figshare.c.3624599_d1
title: Additional file 1: of Alterations in serum microRNA in humans with alcohol use disorders impact cell proliferation and cell death pathways and predict structural and functional changes in brain

description: List of miRNAs showing changes (at p &lt; 0.1 level) in rat drinking paradigms and mouse neural stem cell exposure paradigms.
DOI: 10.6084/m9.figshare.c.3624593_d3
title: Additional file 2: Table S2. of Metabolic gene expression profile in circulating mononuclear cells reflects obesity-associated metabolic inflexibility

description: Primers used for SYBR Green Assay and their properties. (XLSX 11Â kb)
DOI: 10.6084/m9.figshare.c.3624590_d4
title: Additional file 8: of Genome analysis and avirulence gene cloning using a high-density RADseq linkage map of the flax rust fungus, Melampsora lini

description: Recombination bins in the CH5 genetic map. Table showing the number of markers, number of scaffolds, cumulative scaffold length and sequence characteristics for each recombination bin in the CH5 genetic map. (XLSX 215 kb)
DOI: 10.15468/dl.y9tpwp
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cuon alpinus alpinus"
 ]
}

 The dataset includes 18 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033229-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3624629_d1
title: Additional file 1: of Use of electronic cigarettes among secondary and high school students from a socially disadvantaged rural area in Poland

description: Data set GYTS. (CSV 792Â kb)
DOI: 10.6084/m9.figshare.c.3624590_d12
title: Additional file 16: of Genome analysis and avirulence gene cloning using a high-density RADseq linkage map of the flax rust fungus, Melampsora lini

description: Genotyping scores used to make the CH5 genetic map. Table showing the number of markers, number of genotyping scores of each type and number of missing/corrected genotyping scores for each linkage group in the CH5 genetic map. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3624590_d14
title: Additional file 6: of Genome analysis and avirulence gene cloning using a high-density RADseq linkage map of the flax rust fungus, Melampsora lini

description: Anchored scaffolds in the M. lini genome assembly. Table showing the numbers of markers, assignment to genetic linkage group and orientation information for each anchored scaffold in the M. lini genome assembly. (XLSX 255 kb)
DOI: 10.6084/m9.figshare.c.3624722_d1
title: Additional file 1: of Risk factors for elevated liver enzymes during refeeding of severely malnourished patients with eating disorders: a retrospective cohort study

description: Raw Data Table. (XLSX 133 kb)
DOI: 10.6084/m9.figshare.c.3624728_d1
title: Additional file 12: of Differential responses of the gut transcriptome to plant protein diets in farmed Atlantic salmon

description: Pathways ( n  = 68) and contributing genes altered in distal gut of Atlantic salmon fed a soybean meal (SBM) diet. (XLSX 79 kb)
DOI: 10.6084/m9.figshare.c.3624734_d1
title: Additional file 2 of Measuring the potential of individual airports for pandemic spread over the world airline network

description: Airport AEF values. This CSV file gives the AEF of the airports as calculated and used in the current study. Airports are indexed by IATA code, and also by city and country. AEF values are normalized to the range 0,100. (CSV 131 kb)
DOI: 10.6084/m9.figshare.c.3624728_d2
title: Additional file 7: of Differential responses of the gut transcriptome to plant protein diets in farmed Atlantic salmon

description: List of common and unique pathways that were significantly altered ( P -value
DOI: 10.17863/cam.13111
title: Raw Data supporting article: Catechol-TiO2 hybrids for photocatalytic H2 production and photocathode assembly

description: Raw Data supporting article: Catechol-TiO2 hybrids for photocatalytic H2 production and photocathode assembly
DOI: 10.17863/cam.53188
title: Research data supporting "Brain networks underlying vulnerability and resilience to drug addiction"

description: PNAS folder with 3 subfolders, which include: 1. Fmri2_seed, including 6 seed nifti image and 1 brain mask image. 2. Fmri3_RSFCz, including 6 4D nifti images, i.e. seed-based RSFC-z maps for 162 subjects. 3. Fmri4_stat_glm, including the fsl glm design files for ANCOVA. 4. Fmri5_stat_files, including ANCOVA resulting images and significant clusters. SPSS data file with demographic data.
DOI: 10.17863/cam.108633
title: Research Data supporting "3D observations provide striking findings in rubber elasticity"

description: There are five .rar files, corresponding to Figure 1 to Figure 5. Please unzip to access the dataset. In each figure folder, there are subfolders (named as “A”, “B”, “C”, …) that contain data of each subfigure, namely Figure 1A, Figure 1B, etc... There are four types of data format, namely vtk, xlsx, mat, and opju. Here is a detailed guidance on how to utilize/access these four different types of data format. (1) For vtk files, use the Paraview software (https://www.paraview.org/). Paraview is an open source software free to download. A simple tutorial is also available on the website. With the paraview installed and opened, simply drag vtk file to the paraview, and the software will display the 3D information stored in the vtk file. (2) For xlsx file, use the Microsoft Excel software (https://www.microsoft.com/en-gb/microsoft-365/excel). The software is also free to use. Once open, the names of the columns and rows in the xlsx file clearly indicates the information as they correspond to the figure caption. The files contain 2D data for all the line plots and point plots in the figures. (3) For mat file, use the Matlab software (https://ww2.mathworks.cn/products/matlab.html). Matlab is widely available from different sources. The mat files are accessible for Matlab version after 2016. Similar to xlsx files, the names of the columns and rows in the mat file clearly indicates the information as they correspond to the figure caption. The files contain 2D data for all the line plots and point plots in the figures. (4) For opju file, use Origin software (https://www.originlab.com/). The software is widely available from different sources. Any version after 2018 will work. Similar to xlsx and mat files, the names of the columns and rows in the opju file clearly indicates the information as they correspond to the figure caption. The files contain 2D data for all the line plots and point plots in the figures. Additionally, the opju file contains the 2D plots generated from the data, same as those appeared in the figures. Readers are recommended to read the paper thoroughly before looking into this dataset.
DOI: 10.17863/cam.55075
title: A repository of data related to the manuscript titled "Distributed Abstraction and Verification of an Installed Optical Fiber Network"

description: A repository of data related to the manuscript titled "Distributed Abstraction and Verification of an Installed Optical Fiber Network" A joint experiment between the University of Cambridge, University of Bristol and UCL to abstract the transmission performance of part of the national dark fibre facility. MATLAB file TRx_Calbrations.m reports the receiver calibration phase. excel file RawLoopBackResults_Dec2018_v1.xlsx contains the reported results for the abstraction probing phase from each partner. excel file Summary_for_Partners_v3.xlsx summaries the abstraction phase and reports the verification results. %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% The authors acknowledge funding support from the UK EPSRC (through the project INSIGHT EP/L026155/2 and the programme TRANSNET EP/R035342/1), the UK Royal Academy of Engineering under the Research Fellowships scheme and the EU H2020 project(Metro-Haul,761727), equipment from Ciena and Facebook and use of the UK EPSRC National Dark Fibre Facility, EP/S028854/1. %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
DOI: 10.17863/cam.81078
title: Research data supporting “Accurate Prediction of Ice Nucleation From Room Temperature Water”

description: See README file for a detailed description of this dataset. It contains all the simulation inputs, data, and code that support the findings of the study, along with the IcePic model. There are 8 subdirectories. The python code is contained within the IcePic/ directory, which has also been made available (without the underlying data present here) at: https://github/mbdavies13/IcePic
DOI: 10.6084/m9.figshare.c.3624725_d9
title: MOESM2 of Phenomics for photosynthesis, growth and reflectance in Arabidopsis thaliana reveals circadian and long-term fluctuations in heritability

description: Additional file 2: Appendix S1. Overview of experiments conducted and genotypes used. A list of aliases and geographical origins is also included as well as the number of replicates sown and the experiments each genotype was included in.
DOI: 10.6084/m9.figshare.c.3624755_d2
title: Additional file 1: Table S1. of Diversity of human and mouse homeobox gene expression in development and adult tissues

description: Human and mouse SRA data file accessions. (XLSX 30 kb)
DOI: 10.17863/cam.93605
title: Research data supporting "Prevalence of deleterious variants in MC3R in patients with constitutional delay of growth and puberty"

description: Supplementary data supporting "Prevalence of deleterious variants in MC3R in patients with constitutional delay of growth and puberty"
DOI: 10.6084/m9.figshare.c.3624728_d9
title: Additional file 4: of Differential responses of the gut transcriptome to plant protein diets in farmed Atlantic salmon

description: List of Gene Ontology (GO) terms for biological processes that were significantly altered ( P -value
DOI: 10.6084/m9.figshare.c.3624755_d3
title: Additional file 7: Table S9. of Diversity of human and mouse homeobox gene expression in development and adult tissues

description: Gene names for homeobox loci expressed in four major expression â  phasesâ   identified during mouse development. (XLSX 18 kb)
DOI: 10.17863/cam.20647
title: Research data supporting [Numerical modelling of dynamic resistance in high-temperature superconducting coated-conductor wires]

description: Research data supporting [Numerical modelling of dynamic resistance in high-temperature superconducting coated-conductor wires]
DOI: 10.6084/m9.figshare.c.3624728_d10
title: Additional file 9: of Differential responses of the gut transcriptome to plant protein diets in farmed Atlantic salmon

description: Pathways ( n  = 17) and contributing genes altered in distal gut of Atlantic salmon fed a diet with 45 % of soy protein concentrate (S 45 ). (XLSX 27 kb)
DOI: 10.6084/m9.figshare.c.3624764_d2
title: MOESM2 of First microsatellite markers for Paspalum plicatulum (Poaceae) characterization and cross-amplification in different Paspalum species of the Plicatula group

description: Additional file 2. Allocation of Paspalum individuals based on the groups formed in the analysis of the STRUCTURE and DAPC. Groups 1 (red), 2 (blue) and 3 (green) for both analyses.
DOI: 10.6084/m9.figshare.c.3624755_d5
title: Additional file 5: Tables S3â  S8. of Diversity of human and mouse homeobox gene expression in development and adult tissues

description: Gene names for human homeobox loci identified in major expression clusters. (XLSX 51 kb)
DOI: 10.17863/cam.109045
title: I-CeM Lookup Table -- Employer Codes, 1921

description: This spreadsheet is designed to be used in conjunction with the Integrated Census Microdata (I-CeM) collection of historic census data covering the period 1851 to 1921. For further details of the I-CeM data collection, please visit the comprehensive project website at: https://www.campop.geog.cam.ac.uk/research/projects/icem/ Outline information on the I-CeM project are also provided on the README page of this spreadsheet. This file is specifically related to the I-CeM data collection variable EMPLOYERCODE
DOI: 10.6084/m9.figshare.c.3624728_d12
title: Additional file 10: of Differential responses of the gut transcriptome to plant protein diets in farmed Atlantic salmon

description: List of genes associated with biological functions predicted by IPA downstream effects analysis to increase or decrease in distal gut of Atlantic salmon fed single plant protein diets. (XLSX 14Â kb)