cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25678/00054g
title: Data for: Wastewater bypass is a major temporary point-source of antibiotic resistance genes and multi-resistance risk factors in a Swiss river

description: Untreated combined sewage (bypass) is often discharged by wastewater treatment plants to receiving rivers during stormwater events, where it may contribute to increased levels of antibiotic resistance genes (ARGs) and multi-resistance risk factors (multi-resistant bacteria and multi-resistance genomic determinants (MGDs)) in the receiving water. Other contamination sources, such as soil runoff and resuspended river sediment could also play a role during stormwater events. Here we report on stormwater event-based sampling campaigns to determine temporal dynamics of ARGs and multi-resistance risk factors in bypass, treated effluent, and the receiving river, as well as complimentary data on catchment soils and surface sediments. Both indicator ARGs (qPCR) and resistome (ARG profiles revealed by metagenomics) indicated bypass as the main contributor to the increased levels of ARGs in the river during stormwater events. Furthermore, we showed for the first time that the risk of exposure to bypass-borne multi-resistance risk factors increase under stormwater events and that many of these MGDs were plasmid associated and thus potentially mobile. In addition, elevated resistance risk factors persisted for some time (up to 22 hours) in the receiving water after stormwater events, likely due to inputs from distributed overflows in the catchment. This indicates temporal dynamics should be considered when interpreting the risks of exposure to resistance from event-based contamination. We propose that reducing bypass from wastewater treatment plants may be an important intervention option for reducing dissemination of antibiotic resistance.
DOI: 10.5281/zenodo.5594937
title: Dataset for paper "The Weights can be Harmful: Pareto Search versus Weighted Search in Multi-Objective Search-Based Software Engineering"

description: This contains the dataset matched with the code on the GitHub page: https://github.com/ideas-labo/pareto-vs-weight-for-sbse.
DOI: 10.5281/zenodo.5594936
title: Dataset for paper "The Weights can be Harmful: Pareto Search versus Weighted Search in Multi-Objective Search-Based Software Engineering"

description: This contains the dataset matched with the code on the GitHub page: https://github.com/ideas-labo/pareto-vs-weight-for-sbse.
DOI: 10.6084/m9.figshare.16982134
title: Argo_2010

description: 6-15N, 82-88.5E2010
DOI: 10.5281/zenodo.5668808
title: IODP Expedition 354, Hole U1453A - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 354: Bengal Fan
DOI: 10.5281/zenodo.5668807
title: IODP Expedition 354, Hole U1453A - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 354: Bengal Fan
DOI: 10.5281/zenodo.4161592
title: Dataset for Extreme Flooding and Nitrogen Dynamics of a Blackwater River

description: Data used for analysis in the manuscript titled: Extreme Flooding and Nitrogen Dynamics of a Blackwater River.
DOI: 10.5281/zenodo.4161591
title: Dataset for Extreme Flooding and Nitrogen Dynamics of a Blackwater River

description: Data used for analysis in the manuscript titled: Extreme Flooding and Nitrogen Dynamics of a Blackwater River.
DOI: 10.5281/zenodo.5668822
title: IODP Expedition 354, Hole U1450B - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 354: Bengal Fan
DOI: 10.5281/zenodo.5668821
title: IODP Expedition 354, Hole U1450B - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 354: Bengal Fan
DOI: 10.21227/pb6h-1q56
title: Dataset for Eustachian tube-inspired tactile Sensor exploiting Pneumatics for Range Extension and SenSitivity tuning: ESPRESS.0

description: Dataset for supplement to "Eustachian tube-inspired tactile Sensor exploiting Pneumatics for Range Extension and SenSitivity tuning: ESPRESS.0"
DOI: 10.5281/zenodo.5668825
title: IODP Expedition 355, Hole U1456C - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 355: Arabian Sea Monsoon
DOI: 10.5281/zenodo.5668824
title: IODP Expedition 355, Hole U1456C - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 355: Arabian Sea Monsoon
DOI: 10.5281/zenodo.5668843
title: Watt-level 743 nm source by second-harmonic generation of a cascaded phosphosilicate Raman fiber amplifier

description: Open access data set for the manuscript "Watt-level 743 nm source by second-harmonic generation of a cascaded phosphosilicate Raman fiber amplifier" to be published in Optics Letters.
DOI: 10.5281/zenodo.5668842
title: Watt-level 743 nm source by second-harmonic generation of a cascaded phosphosilicate Raman fiber amplifier

description: Open access data set for the manuscript "Watt-level 743 nm source by second-harmonic generation of a cascaded phosphosilicate Raman fiber amplifier" to be published in Optics Letters.
DOI: 10.5281/zenodo.5668873
title: IODP Expedition 353, Hole U1445A - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 353: Indian Monsoon
DOI: 10.5281/zenodo.5668872
title: IODP Expedition 353, Hole U1445A - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 353: Indian Monsoon
DOI: 10.17037/data.00002573
title: Codelists for: "Are common infections associated with cognitive decline and neuroimaging outcomes? A historical cohort study using data from the UK Biobank study linked to primary and secondary care electronic health records"
DOI: 10.5281/zenodo.5668944
title: IODP Expedition 352, Hole U1442A - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 352: Izu-Bonin-Mariana Forearc
DOI: 10.5281/zenodo.5668943
title: IODP Expedition 352, Hole U1442A - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 352: Izu-Bonin-Mariana Forearc
DOI: 10.25345/c5sk3n
title: MassIVE MSV000088340 - swab surface analysis by PRM - factors influencing recovery
title: Spotted 50uL of 10uM Carnitine and swabbed after 45min. Samples were prepared either methanol or ethanol. Samples prepared in methanol were dried and resuspended for LCMS analysis. Samples prepared in ethanol were run immediately.
DOI: 10.5281/zenodo.5668995
title: IODP Expedition 352, Hole U1439C - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 352: Izu-Bonin-Mariana Forearc
DOI: 10.5281/zenodo.5668994
title: IODP Expedition 352, Hole U1439C - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 352: Izu-Bonin-Mariana Forearc
DOI: 10.17632/2nm22vj66y.2
title: Lateral flow and contributing area control vegetation cover in a semiarid environment 

description: Semiarid ecosystems attract attention, because they support the life of large human populations, while functioning under growing threats of degradation due to global climate change, that may lead to reduced productivity, and possibly irreversible desertification. Mathematical models have been developed to predict desertification, based on the premise that limited vegetation cover indicates water stress. However, local attributes may mask the smooth relationships quantified by these synthetic models, and empirical support is highly sought after in a bid to validate the soil-moisture-biomass relationship at the local scale. However, field data is limited by costly and time-consuming data acquisition. Spatially and temporally explicit realistic models may be one possible solution for studying the effect of field heterogeneity on these relationships. Combining physically-based models and a database of 32 years of field and remotely sensed data, we examined the effect of soil-moisture content (SMC) on vegetation cover and patch size distribution in the semiarid Lehavim LTER in the Negev Desert, Israel. Within this framework, results from numerical solutions of flow equations in the shallow soil layer, near the soil surface, allowed predictions of distributions of SMC as the outcome of vertical and lateral water fluxes. The association of vertical fluxes with patch size distribution and vegetation cover did not support the notion that direct rainfall is sufficient for the shrubs’ survival in drought conditions. However, re-infiltration of downslope runoff (also known as run-on) generated in the sealed bare intershrub soil area, significantly contributed to the water available to supporting shrub patches. Accordingly, our approach determines potential vegetation cover in semiarid areas, due to the dependency on contributing area and rainfall-infiltration-runoff processes. This underscores the fact that, in addition to infiltration from direct rainfall, run-on contribution determines shrub patches size and vegetation cover in semiarid environments. We therefore suggest that estimations of shrub resilience in semiarid regions to water stress should consider scenarios involving surface sealing, rainfall intensity and contributing area size—each in accordance with the contribution of lateral flows to the water available to shrubs.
DOI: 10.17632/95xcrv9kxj.1
title: Granzyme

description: Abstract
Background/Objective. 
Granzymes (gzms) play an important role in the regulation of inflammation. Objective: to assess the development of osteoarthritis (OA) in granzyme A and B and perforin (perf) knock out mice.
Methods. 
Male and female C57BL/6 (8-9 weeks old) mice (n=75) were alloted to: gzmA-deficient (gzmA-/-), gzmB-deficient (gzmB-/-), perforin-deficient (perf-/-), and Control group. OA was induced in the right knee by instability of the meniscus medial ligament. Sham surgery was practiced in the left knee. Knee samples obtained 8 weeks after surgery were stained (Safranin-O) and blindly scored in lateral and medial femur and tibia using Osteoarthritis Research Society International scale (OARSI) (from Grade 0 (cartilage intact) to 6 (deformation)); five stages from 0 (no OA) to 4 (>50% surface involvement); OARSI score (grade x stage); and a semi-quantitative scale from Grade 0 (normal) to 6 (cartilage erosion >80%). 
Results. 
We observed significant higher values in all scales in the right knees compared with the left knees in male and female mice. Males of all strains presented in the right knee higher values than females. Perf -/- females presented higher non-significant values than the other groups. GzmA -/- females presented less degenerative changes than the other groups.
Conclusion. 
Sex played an important role in development of experimental OA in mice. Deficiency of gzmA protected from the development of OA through instabilization of medial meniscus in female mice. 
"The Translational Potential of this Article". Targeting gzmA in osteoarthritis should be a potential therapeutic strategy to aminorate development of the cartilage damage.
Key words: Granzyme. Osteoarthritis. Perforin
DOI: 10.17632/j9p2zz849v.1
title: The effect of solvent composition on stability and performance of CsPbIBr2

description: Summary:
One-step spin coated CsPbIBr2 films, made with three different precursor solutions in order to investigate the effect of solvent composition on the processed film.

Hypothesis: 
The best results will be obtained when the ratio of DMF to DMSO is equal to the ratio of iodine to bromine (1:2).

Highlights:
-	Hypotheis supported, the film where the solvent mixture was made up of 67% DMSO and 33% DMF outperformed all other films when fresh.
-	The film where only DMSO was used showed higher stability when aged.
DOI: 10.17632/dp3f425kkf.1
title: Active Pharmaceutical Ingredients from Brazilian Pharmacopeia in PDBQT format, for docking with AutoDock e Vina Tools

description: Active Pharmaceutical Ingredients (APIs) are molecules that can be used for the manufacturing of Drugs. The Brazilian Health Regulatory Agency (Agência Nacional de Vigilância Sanitária) is responsible for the oversight and approval of production and distribution of all drugs in Brazilian territory. The dataset containing PDBQT format files, with correct protonation states for pH 7.4 is useful for in silico molecular docking with AutoDock e Vina Tools.
DOI: 10.17632/mks57dyb5f.1
title: Family Context and Individual Characteristics in Antenatal Care Utilization among adolescent childbearing mothers in Urban Slums in Nigeria

description: A major gap in the literature is on the influence of the family context in pregnant adolescent patronage of ANC services.  This study is therefore aimed at examining the influence of family context in ANC uptake among childbearing adolescents in urban slums in Nigeria.

The survey used a multi-stage sampling design. At the first stage, the 3 states identified in the extant literature as accommodating the bulk of urban slums in Nigeria- Kaduna, Lagos, and Oyo states were selected. All the local government areas (LGAs) where the slums areas were located were also selected. All clusters within the LGAs designated as slum areas were selected. Individuals were randomly selected within the households in each cluster. As such, individuals were nested within clusters and clusters, nested within LGAs. The data covered a sample of 1,015, 1,009 and 1,088 childbearing adolescents with at least a child less than 5 years from Kaduna, Lagos, and Oyo states respectively. The data collection was implemented between July and October 2018. The inclusion criteria included being a teenager and having begun childbearing and having had a child during adolescence with the reference child below 5 years.  The upper age limit for those who had a child during adolescence was therefore extended to 24 years to accommodate those who had a child at age 19 years with the current age of the child around 5 years. All women who had their first birth after age 19 years were excluded from the sample. 

Overall, about 70 percent of female adolescents in our sample had any antenatal care (ANC) visit. About 62 percent had at least 4 ANC visits, and, about 55 percent had 4 ANC visits in a health facility with skilled attendant (4ANC+). Those who have both parents alive and the mother with post-primary education have higher odds of attending 4ANC+ visits. The odds of attending 4ANC+ for those who have lost both parents is almost 60% less than those whose parents are alive, and, about 40% less than those whose mothers are alive. The influence of mother’s education on 4ANC+ attendance is more significant with a large disparity when both parents are dead.

The study concludes that identifying the role of parents and community in expanding access to ANC services among adolescent mothers is important in improving maternal health in developing countries.
DOI: 10.17632/tv4cm845wv.1
title: Dataset for Data in Brief (DIB-D-21-01502)

description: This dataset is for the Data in Brief article: "Dataset of the electrochemical potential windows for the Au(hkl)|ionic liquid interfaces defined by the cut-off current densities"
DOI: 10.17632/6g6pxwjj48.1
title: ADAM-Sense: Anxiety-Displaying Activities Recognition by Motion Sensors

description: There are some behaviors which anxiety patients perform unknowingly which become their habit, for example, nail biting, knuckles cracking etc. However, it is not guaranteed that if someone does one or more of these activities, they are anxious. But it is usually the case that people do some physical repetitive actions when they are anxious, and they are not aware of their actions. Such behaviors become their habits and can be used as an indicative of their anxiety status. We have collected some of these common behaviors which are usually performed by individuals when they are in anxiety. This is not an exhaustive list of such behaviors but can be used as the starting point to identify the presence of anxiety. These behaviors are physical actions so that we can capture them through motion sensors.
DOI: 10.17632/c77trxsr58.1
title: Device for measuring part adhesion in FFF process

description: Design files of a adhesion test device for Fused Filament Fabrication
DOI: 10.17632/snzrkfrg7x.1
title: Active Pharmaceutical Ingredients from Brazilian Pharmacopeia in 2Dsdf, 3Dsdf and Mol2 format

description: Active Pharmaceutical Ingredients (APIs) are molecules that can be used for the manufacturing of Drugs. The Brazilian Health Regulatory Agency (Agência Nacional de Vigilância Sanitária) is responsible for the oversight and approval of production and distribution of all drugs in Brazilian territory. The dataset containing 2Dsdf, 3Dsdf and Mol2 format files may be useful in a vast range of in silico techniques.

“APIs Anvisa sdf” is composed of 2D sdf format files, obtained from PubChem or DrugBank databases, where the download of the molecules were made manually and individually;
“APIs Anvisa MOL2” is composed of mol2 format files;
“APIs Anvisa 3Dsdf” having three-dimensional structures in sdf format.

The data conversion was made by using the OpenBabel and Marvin software.
DOI: 10.17632/cfjrzm8zcb.1
title: A dataset of soil microstructure features and the weather conditions affecting them from 2005 to 2021 in the Caspian Depression

description: The dataset includes micromorphological photographs of the state of the soil complex on the territory of the Caspian Depression in the Dzhanybek Research Station of the Institute of Forest Science RAS in 2005. This year marks the first time that soil properties are modeled at the present day, taking into account the changed meteorological parameter. The weather data was collected between February 2005 and June 2021.
DOI: 10.6084/m9.figshare.16982134.v1
title: Argo_2010

description: 6-15N, 82-88.5E2010
DOI: 10.5281/zenodo.5669066
title: IODP Expedition 350, Hole U1437D - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 350: Izu-Bonin-Mariana Rear Arc
DOI: 10.5281/zenodo.5669065
title: IODP Expedition 350, Hole U1437D - Well Logging Data

description: Logging data are measurements of physical properties of the formation surrounding a borehole, acquired in situ after completion of coring (wireline logging) or during drilling (Logging-While-Drilling, LWD). The range of data (resistivity, gamma radiation, velocity, density, borehole images,…) in any hole depends on the scientific objectives and operational constraints.
description: IODP Expedition 350: Izu-Bonin-Mariana Rear Arc
DOI: 10.6084/m9.figshare.16983532
title: species list

description: Alien species recorded in Taiwanese, Iberian and Australian bird trade market.
DOI: 10.6084/m9.figshare.16983532.v1
title: species list

description: Alien species recorded in Taiwanese, Iberian and Australian bird trade market.