cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/7gn6dj89t3.2
title: Sequential activity of CA1 hippocampal cells constitutes a temporal memory map for associative learning in mice

description: Sequential neural dynamics encoded by “time cells” play a crucial role in hippocampal function. However, the role of hippocampal sequential neural dynamics in associative learning is an open question. We used two-photon Ca2+ imaging of dorsal CA1 (dCA1) neurons in the stratum pyramidale (SP) in head-fixed mice performing a go-no-go associative learning task to investigate how odor valence is temporally encoded in this area of the brain. We found that SP cells responded differentially to the rewarded or unrewarded odor. The stimuli were decoded accurately from the activity of the neuronal ensemble, and accuracy increased substantially as the animal learned to differentiate the stimuli. Decoding the stimulus from individual SP cells responding differentially revealed that decision-making took place at discrete times after stimulus presentation. Lick prediction decoded from the ensemble activity of cells in dCA1 correlated linearly with lick behavior indicating that sequential activity of SP cells in dCA1 constitutes a temporal memory map used for decision-making in associative learning.

Here we deposit the data necessary to generate the figures in our Current Biology manuscript (DOI: 10.1101/2023.10.01.560382) using the code deposited in https://github.com/restrepd/CA1_Figures
DOI: 10.17632/gbpm9459kh.1
title: Temperature, respiratory and weight changes following intranasal L. plantarum administration in PPR vaccinated red sokoto goats

description: The rectal temperature, respiratory rates and weights of PPR-vaccinated red sokoto goats were measured following intranasal administration of L. plantarum. Temperature and respiratory rates were obtained daily while weight changes were observed weekly. the weekly average of recorded temperature and respiratory rates for each group was calculated and is presented in this data set. the hematological parameters were analysed from blood samples collected weekly. An average per week should be calculated based on the groups presented. Data should be subjected to statistical analysis to derive the mean and standard deviation. ANOVA can be used to compare differences between the groups.
DOI: 10.17632/4zwbp8k7cr.1
title: Duration of ICME signatures in in-situ data from several space probes for the time interval of 2004-2021

description: Duration of ICME signatures identified in in-situ data by Zsuzsanna Dalya for the space probes ACE, STEREO A&B, Wind, SolO, PSP, DSCOVR, VEX, MAVEN and Messenger, from the year of 2004 until the year of 2021.

The data is ordered into folders based on the space probes. The dataset of each space probe is segmented into files of a full year's worth of data.
The columns of the files contain:
ICME start year, month, day, hour, minute
ICME end year, month, day, hour, minute
DOI: 10.17632/fdkbx9jmpx.2
title: Temporal changes in the body shape of the Pacific thread herring Opisthonema libertate on the Western Baja California Sur coast

description: Superimposed and aligned coordinates 2D for geometric morphometric analysis of body shape variation of the Pacific thread herring Opisthonema libertate.
DOI: 10.17632/nz789jbbxc.1
title: A regulatory loop involving the cytochrome P450-soluble epoxide hydrolase axis and TGF-beta signaling

description: Uncropped Western blots relating to the role of sEH in macrophages
DOI: 10.17632/t5fd58m67p.1
title: Bidgood et al. 2024 - Tso Morari - Supporting Information 3: Geochronology data

description: Data supporting publication Bidgood et al., 2024; "The geodynamic significance of continental UHP exhumation: New constraints from Tso Morari Complex, NW Himalaya" published in Tectonics.

8.3.1. Summary
8.3.2. ID-TIMS Zircon U-Pb 
8.3.3. Laser Ablation Xenotime U-Pb 
8.3.4. Laser Ablation Rutile U-Pb 
8.3.5. Laser Ablation Zircon U-Pb 
8.3.6. Laser Ablation Zircon trace elements
8.3.7. Run conditions Zircon
8.3.8. Run conditions Rutile
8.3.9. Run conditions trace elements
DOI: 10.17632/w78trzdjrv.1
title: Primary care-focused educational intervention leads to improved diagnostic accuracy of cutaneous malignancies in patients with skin of color - pre/post test survey.

description: This survey was used to assess participants baseline knowledge of skin cancer in different skin types as well as their ability to identify images of benign and cancerous skin lesions. The survey also includes demographic information and questions regarding participants' perceptions regarding skin cancer. We administered the survey before and after a one-hour presentation on skin cancer in all skin types during scheduled didactic sessions in five primary care residency programs in central Indiana. We identified a significant knowledge gap among participants regarding skin cancer in skin of color and showed a statistically significant improvement in knowledge, confidence and the ability to correctly identify images of cancerous lesions in patients with skin of color following our presentation. We believe the results of our study demonstrate a need to increase education on skin cancers and specifically presentations of skin cancer in patients with skin of color among primary care residents.
DOI: 10.17632/3f8tvpw348.1
title: Whole genome sequence data of Leptospira weilii and Leptospira Leptospira kirschneri isolated from human subjects Sri Lanka

description: Leptospira kirschneri (3/38) and Leptospira weilii(4/23) in the NCBI database is limited. Sequencing the entire Leptospira genome and conducting thorough analysis of the data can significantly enhance the ability to predict and respond to outbreaks more quickly. Whole genome sequencing proves particularly valuable in the molecular epidemiology of infections, particularly during outbreaks, by improving efficiency and accuracy.
• Researchers studying leptospirosis can benefit from this data by utilizing it in their studies related to vaccine development and uncovering the molecular mechanisms underlying pathogenesis in leptospirosis.
DOI: 10.17632/vr5f2mbnrm.1
title: 2023-WangMartinezBonet-TRAF1C5

description: Data accompanying manuscript "Identification of a regulatory pathway governing TRAF1 via an arthritis-associated non-coding variant" by Qiang Wang, Marta Martínez-Bonet...Peter A. Nigrovic.
DOI: 10.17632/s5p2dfdxw8.1
title: Circulating microRNA screening in nasopharyngeal carcinoma patients in Pahang State of Malaysia.

description: This raw data are circulating microRNA expression in nasopharyngeal patients acquired using Taqman Low Density Array Cards A and B.
DOI: 10.17632/3grzxcymnr.1
title: Tilapia Sausage Degradation

description: Degradação de embutidos de tilapia
DOI: 10.17632/3grzxcymnr.2
title: Tilapia Sausage Degradation

description: Degradação de embutidos de tilapia
DOI: 10.17632/c5grrwvd5b.2
title: Data for: "Understanding conspicuity in the dissemination of experiences on social media: the effect of materialism” published by RAC-Revista de Administração Contemporânea

description: Data sets for “Understanding conspicuity in the dissemination of experiences on social media: the effect of materialism” published by RAC-Revista de Administração Contemporânea.
DOI: 10.17632/c5grrwvd5b.1
title: Data for: "Understanding conspicuity in the dissemination of experiences on social media: the effect of materialism” published by RAC-Revista de Administração Contemporânea

description: Data sets for “Understanding conspicuity in the dissemination of experiences on social media: the effect of materialism” published by RAC-Revista de Administração Contemporânea.
DOI: 10.17632/wfhwj6x4h6.1
title: LSTM-Attention Mechanism

description: The dataset comprises recordings of seven activities that were captured using Raspberry Pi (RPi) devices. Each activity was captured using 64 subcarriers, which refer to specific frequency components within the wireless signal. The dataset includes 200 packets, representing multiple instances of each activity.
DOI: 10.17632/wdk4zp9cnr.1
title: RCT Orienteering

description: The purpose of this study was to compare the effect of the orienteering modality with the walking modality and a control group in terms of gait and cognitive skills. How the methodology was carried out a randomized clinical trial (RCT) compared the effects of training, dual-task orienteering and single-task hiking in healthy older adults (n = 90) allocated into three groups: orientation group (OG), hiking group (HG) and control group (CG). Timed Up and Go (TUG) tests, including a dual-task version (TUG-DT), as well as cognitive tests were administered. Differences were analyzed by Generalized Estimating Equations (GEE) with Bonferroni correction, and the effect size (ES) was calculated. Unpaired tests analyzed potential baseline differences, while intragroup and paired and unpaired intergroup tests assessed differences between baseline and 24 weeks after the intervention. This RCT highlights the interaction effects between groups and time, showing that only the OG in the TUG-DT reduced 6 seconds over time, with a change of 42% (ES=0.77). Likewise, the underlying variables, Dual TUG + cognitive stops (TUG-DT+ CS) and Dual TUG + cognitive stops + cognitive errors (TUG-DT + CS + CE) reduced 7 (ES=0.85) and 8 (ES = 0.90) seconds, respectively (&lt;0.001). Task cost improved by 75% for OG and 24% for HG, demonstrating significant differences (p=0.001) and ES of 0.56 for OG. For cognition it increased 49.2% (ES=2.00) for OG and 16.5% for HG in executive functions and visuospatial skills, 31.4% (ES=1.64) for OG and 14.7% for HG in processing speed and memory by 39.8% (ES=1.62) for OG and 6.5% for HG. All interactions were &lt;0.001. These findings highlight the potential of orienteering as a modality that can enhance resistance to interference from a secondary task on the primary task, resulting in improved efficiency in both gait performance and cognitive flexibility. Many studies explore the neuroscientific paradigm of dual-task through exercise programs for older aduktas. This RCT investigated the orienteering modality, which has a significant potential in addressing physical and cognitive demands that have not been previously explored in research involving older individuals and their physical and cognitive demands. Particularly, orienteering showed better performance in functional mobility and dual-tasks. The clinical effects were evidenced for the concurrent use of these physical and cognitive abilities by the orienteering with significant changes and intervention effect that varied from strong to medium. This RCT suggests the effectiveness of orienteering, even if it has never been practiced, being useful for greater efficiency in gait performance and cognitive flexibility. We encourage the application of this modality in gerontological physical education and scientific research.
DOI: 10.17632/wdk4zp9cnr.2
title: RCT Orienteering

description: The purpose of this study was to compare the effect of the orienteering modality with the walking modality and a control group in terms of gait and cognitive skills. How the methodology was carried out a randomized clinical trial (RCT) compared the effects of training, dual-task orienteering and single-task hiking in healthy older adults (n = 90) allocated into three groups: orientation group (OG), hiking group (HG) and control group (CG). Timed Up and Go (TUG) tests, including a dual-task version (TUG-DT), as well as cognitive tests were administered. Differences were analyzed by Generalized Estimating Equations (GEE) with Bonferroni correction, and the effect size (ES) was calculated. Unpaired tests analyzed potential baseline differences, while intragroup and paired and unpaired intergroup tests assessed differences between baseline and 24 weeks after the intervention. This RCT highlights the interaction effects between groups and time, showing that only the OG in the TUG-DT reduced 6 seconds over time, with a change of 42% (ES=0.77). Likewise, the underlying variables, Dual TUG + cognitive stops (TUG-DT+ CS) and Dual TUG + cognitive stops + cognitive errors (TUG-DT + CS + CE) reduced 7 (ES=0.85) and 8 (ES = 0.90) seconds, respectively (&lt;0.001). Task cost improved by 75% for OG and 24% for HG, demonstrating significant differences (p=0.001) and ES of 0.56 for OG. For cognition it increased 49.2% (ES=2.00) for OG and 16.5% for HG in executive functions and visuospatial skills, 31.4% (ES=1.64) for OG and 14.7% for HG in processing speed and memory by 39.8% (ES=1.62) for OG and 6.5% for HG. All interactions were &lt;0.001. These findings highlight the potential of orienteering as a modality that can enhance resistance to interference from a secondary task on the primary task, resulting in improved efficiency in both gait performance and cognitive flexibility. Many studies explore the neuroscientific paradigm of dual-task through exercise programs for older aduktas. This RCT investigated the orienteering modality, which has a significant potential in addressing physical and cognitive demands that have not been previously explored in research involving older individuals and their physical and cognitive demands. Particularly, orienteering showed better performance in functional mobility and dual-tasks. The clinical effects were evidenced for the concurrent use of these physical and cognitive abilities by the orienteering with significant changes and intervention effect that varied from strong to medium. This RCT suggests the effectiveness of orienteering, even if it has never been practiced, being useful for greater efficiency in gait performance and cognitive flexibility. We encourage the application of this modality in gerontological physical education and scientific research.
DOI: 10.17632/btngtsstd3.1
title: Tool Grinding of Drills with various Grinding Wheels and Materials

description: The data was collected from 160 flute grinding processes during the machining of twist drills. The process was carried out on a Walter Vision 400 L with diamond abrasive grains in a hybrid bond Q-Flute Evo 2 from Saint Gobain Diamantwerkzeuge GmbH. Various types of material from Tigra GmbH were used. In addition to the technology parameters, the currents of the machine drives, meassured surface roughness, and simulated data of the local engagement conditions are included.
DOI: 10.17632/btngtsstd3.2
title: Tool Grinding of Drills with various Diamond Grinding Wheels and Tungsten Carbide Materials

description: The data was collected from 160 flute grinding processes during the machining of twist drills. The process was carried out on a Walter Vision 400 L with diamond abrasive grains in a hybrid bond Q-Flute Evo 2 from Saint Gobain Diamantwerkzeuge GmbH. Various types of material from Tigra GmbH were used. In addition to the technology parameters, the currents of the machine drives, meassured surface roughness, and simulated data of the local engagement conditions are included.
DOI: 10.17632/btngtsstd3.3
title: Tool Grinding of Drills with various Diamond Grinding Wheels and Tungsten Carbide Materials

description: The data was collected from 160 flute grinding processes during the machining of twist drills. The process was carried out on a Walter Vision 400 L with diamond abrasive grains in a hybrid bonded Q-Flute Evo 2 from Saint Gobain Diamantwerkzeuge GmbH. Various types of material from Tigra GmbH were used. In addition to the technology parameters, the currents of the machine drives, meassured surface roughness, and simulated data of the local engagement conditions are included.
DOI: 10.17632/tg9cf45hzy.1
title: Data relating to 'Food Ingredients for the Future: In-Depth Analysis of the Effects of Lactic Acid Bacteria Fermentation on Spent Barley Rootlets'

description: Dataset relating to the article 'Food Ingredients for the Future: In-Depth Analysis of the Effects of Lactic Acid Bacteria Fermentation on Spent Barley Rootlets'.
DOI: 10.17632/yyyvk4z6jd.1
title: MS Hertel et al

description: These data are the original WB and graphs from the manuscript Hertel et al. "The ion-chelation activity governs the antiviral function of the alarmin S100A9 in human myeloid cells"
DOI: 10.17632/9bccmf76sb.1
title: Elastic-net regularized regression - R script

description: Elastic-net regularized regression script used for the manuscript entitled 'The relation between visual functions, functional vision, and bimanual function in children with unilateral cerebral palsy'. 
The scripts construct an elastic net regularised regression model with nested-cross validation. For the outer loop, leave-one-out cross-validation was used, which iteratively selects the data of one participant as a test set, and then trains the model on the data of the remaining participants. This process is repeated for every participant in the dataset. For the inner loop, an elastic-net regularized regression model was built on the training data. (2024-02-09)
DOI: 10.17632/4xvx4p9tzv.1
title: Clinical super-resolution computed tomography of bone microstructure: application in musculoskeletal and dental imaging

description: Pretrained models for super-resolution on musculoskeletal and dental computed tomography data. The three models (Baseline model, Structure model and Visual model) are trained on knee tissue blocks and extracted teeth to increase the image quality on reconstructions with 200µm voxel size.
DOI: 10.17632/fkx7j4m7t5.1
title: LDHU3_02.0660

description: Protein of unknown function - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/c3kng92tmf.1
title: Modelling partial melting in sinking Archaean greenstone belts with implications for TTG formation

description: This is the datasets of the manuscript of "Modelling partial melting in sinking Archaean greenstone belts with implications for TTG formation"
DOI: 10.17632/fz49dfb8s6.1
title: LDHU3_02.0650

description: Hypothetical protein - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/j3cvj45frf.1
title: LDHU3_02.0610

description: Hypothetical protein - conserved; Leishmania donovani (HU3 strain)
DOI: 10.17632/czbdmdgc7d.1
title: Replication data for: The Structure and Growth of Ethnic Neighborhoods

description: The code, most data, and a description of how to obtain the remaining data required to replicate all exhibits in our paper, "The Structure and Growth of Ethnic Neighborhoods," Journal of Urban Economics, 2023. See the README file for detailed instructions on replication; see our paper for details on the dataset. Additional details, interactive maps, and generated datasets are available on our project page: https://nathanschiff.com/structure-and-growth-of-ethnic-neighborhoods/. For researchers without access to the Journal of Urban Economics, a page proof copy of the paper is available at https://www.nathanschiff.com/webdocs/my_papers/ee_WP_June_2023.pdf.
DOI: 10.17632/xtmc5hf3h6.1
title: Inverse Kinematics of a 5-DOF Tripod-based Hybrid Manipulator. Julia Files

description: This dataset contains Julia files that solve the inverse kinematic problem of a 5-DOF hybrid manipulator that includes a 3-DOF 3-PRS parallel mechanism (tripod) and a 2-DOF XY table. The corresponding paper describing the applied algorithm is going to be published in Journal of Machinery Manufacture and Reliability. Please check the list of works at https://orcid.org/0000-0002-3928-5440.

The dataset includes the following Julia files:
1. File "main.jl" is the main file that proceeds with the inverse kinematic analysis of the manipulator step by step.
2. File "geometry.jl" is used to define geometrical parameters of the manipulator.
3. File "trajectories.jl" includes a function that define trajectory of the tripod output link relative to the moving table, which is used as the input motion for the inverse kinematics.
4. File "kinematics.jl" includes a function that solves the inverse kinematic problem and one auxiliary function.
5. File "plots.jl" includes a function that visualizes the results of the kinematic analysis.
6. Optional files "Project.toml" and "Manifest.toml" contain information about the used packages.

In addition, the dataset includes the following files obtained from the SolidWorks package:
1. File "ikp_CAD.xlsx" contains a solution to the inverse kinematics obtained with CAD simulations.
2. File "ikp.avi" contains a short video that illustrates the performed CAD simulations.
DOI: 10.17632/fjfkhmn24k.1
title: Dataset on biochemical composition and hydrothermal liquefaction of a native microalgae biofilm grown using municipal anaerobic digester effluent in Salt Lake City, Utah

description: This dataset contains data on the biochemical composition and hydrothermal liquefaction product yields of a native microalgae biofilm grown using laboratory-scale and pilot-scale Rotating Algae Biofilm Reactors and municipal anaerobic digester effluent from Central Valley Water Reclamation Facility in Salt Lake City, Utah. Data categories are separated into separate sheets for elemental composition of the biofilm and biocrude (CHNS-O), mineral composition of the biofilm and biochar (Al, As, B, Ba, Ca, Cd, Co, Cr, Cu, Fe, K, Mg, Mn, Mo, Na, Ni, P, Pb, S, Se, Si, Sr, Zn), product yields after hydrothermal liquefaction (mass in solid, non-polar, aqueous, and gas phases), properties of the aqueous product phase (total nitrogen, total ammonia, total organic carbon, pH, chemical oxygen demand), and biochemical chemical composition of the biofilm (protein, lipid, carbohydrate, ash).
DOI: 10.17632/nprxj3dmvm.1
title: Osiński et al uncropped images

description: Uncropped, original images of gels presented in the associated published manuscript. Where only part of the gel was presented in the published manuscript, this is highlighted by a box on the relevant portion of the gel.
DOI: 10.17632/v4ghfr3fmm.1
title: Degradation and accumulation of organic matter in euxinic surface sediments

description: Transport-reaction model for the surface sediments in euxinic surface sediments; the code of this model gave an example of the Black Sea.
DOI: 10.17632/54vh5mjbfs.1
title: GrooveNeuroTube

description: Raw data for proteomics
Video 1 showing the elasticity and flexibility of the PCL and PCL-GO materials with varying GO content