cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11739459.v1
title: Soil respiration dataset from a temperate mix forest (James San Jacinto Mountain Reserve)

description: Dataset of soil CO<sub>2</sub> efflux from a temperate mix forest. Includes information from January 2006 to December 2008. Soil CO<sub>2</sub> efflux was measured using the "gradient method" where soil CO<sub>2</sub> concentrations were measured in conjunction with soil temperature and soil moisture. The study was conducted at the University of California James San Jacinto Mountain Reserve, a UC Natural Reserve System field station. The Reserve is a mixed conifer-oak forest at 1640m.a.s.l. located in the San Jacinto Mountains, CA, USA (33<sup>0</sup>48<sup>'</sup>30<sup>''</sup>N, 116<sup>0</sup>46<sup>'</sup>40<sup>''</sup>W). For more details see:<br> Vargas, R. and Allen, M.F., 2008. https://doi.org/10.1111/j.1469-8137.2008.02481.x<br> Vargas et al, 2010. https://doi.org/10.1111/j.1365-2486.2009.02111.x
DOI: 10.6084/m9.figshare.829584.v10
title: EEG Auditory Steady State Reliability Paper

description: These data are the raw, epoched EEG datasets from McFadden et al. Please read the README.txt file for more information.javascript:void(0)
DOI: 10.17632/vxhpxcbs46
title: Расчет средневзвешенной оценки значимости факторов

description: В таблице представлены первичные данные в виде оценок экспертов, а также рассчитаны средневзвешенные оценки значимости факторов инноваций в управлении
DOI: 10.6084/m9.figshare.25705959.v1
title: Figure 4c The significance of the pathways enriched only in the combination exposure group.

description: This dataset contains the p-value of KEGG enrichment pathway analysis for differential expression genes (DEGs) when exposed to capsaicin, mitoxantrone, and combination of them. This is a 12 rows by 4 columns matrix. You can load this data by R using "load" function. Run "script_for_figure4c.R" for making figure 4c in the manuscript.Term: KEGG functional pathway ID and description<br>PValue_Mix: the p-value of KEGG enrichment analysis for DEGs when exposed capsaicin and mitoxantrone<br>PValue_CAP: the p-value of KEGG enrichment analysis for DEGs when exposed capsaicin<br>PValue_MIT: the p-value of KEGG enrichment analysis for DEGs when exposed mitoxantrone
DOI: 10.6084/m9.figshare.26089268.v1
title: HiGTS_2015s2

description: HiGTS is a high temporal resolution global gridded dataset of human thermal stress metrics. Derived using climate variables from ERA5-Land and ERA5, the HiGTS consists of hourly gridded maps of Universal Thermal Climate Index (UTCI), Universal Thermal Stress (UTS), and daily Thermal Stress Duration (TSD) at 0.1° × 0.1° spatial resolution over the global land surface.HiGTS_2015s2 contains the data from April 1, 2015 to June 30, 2015.
DOI: 10.6084/m9.figshare.28194854.v1
title: Simulated Dataset2

description: Simuation toolPlatformDataset nameNo. of spotsNo. of genesNo. of SVGsNo. of non-SVGsNo. of clustersscDesign310X VisiumSimu_1003611200010019007Simu_3003611200030017007Simu_5003611200050015007Simu_7003611200070013007Simu_9003611200090011007
DOI: 10.6084/m9.figshare.4630267.v1
title: imsdb scripts sample

description: List of movie scripts present in the sample
DOI: 10.6084/m9.figshare.6858317.v1
title: Efecto de la composición sobre el comportamiento frente a la corrosión de aceros inoxidables austeníticos y martensíticos

description: ABSTRACT The aim of this work is to study the electrochemical behavior of a series of stainless steels in NaCl solution (10000 ppm Cl-) at room temperature. Considering the differences in structures (austenitic and martensitic) and the composition of alloys, a relationship between their electrochemical behavior and PREN (Pitting resistance equivalent number) was sought. Stainless steels used were: F6NM, 17-4PH, 416 and 304. Measures of open circuit potential in function of time, cyclic potentiodynamic polarization curves, determining the polarization resistance by ASTM G59 (Tafel) and Electrochemical Impedance Spectroscopy (EIE) were carried out. These studies were complemented by observations of the specimens under optical microscopy. The analysis of the results, obtained from the electrochemical tests, allowed to find a relationship between the corrosion behavior, its composition and its PREN, independently of the microstructure that having each.
DOI: 10.17632/97cwmhfmtf
title: Clustering knee radiographs from RA patients

description: In the  study, five paremeters were obtained from 831 knee radiographs from RA patients before total knee arthroplasty. 
Datasets were stored in the folder named 'Data'. 
(Radiographs were not stored in terms of personal information protection.)

Based on five parameters, clustering 831 radiographs into 3 clusters. (The algorism was coded in 'Clusteringkmedoids.m') 
We found clustering into 3 groups was the best way, caluculating the Calinski-Harabasz Index. (Coded in 'OptimizationClusterNum.m')
Comparison of the parameters between 3 clusters were coded in 'CompareParametersBetweenClusters2.m'.
Comparison of clinical data between 3 clusters were coded in 'CompareClinicalData_Bonferroni.m'.
The comparison of the radiographic parameters  between clusters were done in 'ANOVAparametersBonferonni.m'.

The functions used in the algorism were stored in the folder named 'function'.

The code was described in MATLAB 2022a. 
For non-MATLAB users, we published the code in PDFs which were stored in the folder named 'ViewAlgorismPDF'.
DOI: 10.6084/m9.figshare.11742873.v1
title: Supplementary Material for: Comparison of Partial Hepatectomy and Transarterial Chemoembolization in Intermediate-Stage Hepatocellular Carcinoma: A Systematic Review and Meta-Analysis

description: <b><i>Introduction:</i></b> According to the Barcelona Clinic Liver Cancer (BCLC) algorithm, transarterial chemoembolization (TACE) is recommended in patients with hepatocellular carcinoma (HCC) of intermediate stage (BCLC-B), whereas partial hepatectomy (PH) is restricted to early stage A. Expanding the indication for PH to intermediate stage remains debated. <b><i>Objective:</i></b> This meta-analysis aimed to analyze short- and long-term outcomes of PH compared to TACE in patients with intermediate-stage HCC. <b><i>Methods:</i></b> A meta-analysis was conducted according to PRISMA guidelines. Trials comparing PH with TACE in patients with intermediate-stage HCC were selected. Only patients of BCLC-B stage were included in the analyses. Primary endpoint was overall survival (OS) and secondary endpoint was 90-day postprocedural mortality. Random-effects models were used to analyze time ratios (TRs). <b><i>Results:</i></b> Seven eligible trials were analyzed, including 1,730 BCLC-B patients undergoing PH (<i>n</i> = 750) or TACE (<i>n</i> = 980). Comparison of OS between PH and TACE determined a pooled TR of 1.91 (95% CI 1.24–2.94; <i>p</i> &lt; 0.001). Survival rates at 1-, 3-, and 5-year were 85, 60, and 42% after PH, compared to 73, 60, and 20% after TACE (<i>p</i> &lt; 0.001). There was no difference in postprocedural mortality between PH and TACE with rates of 3.7 and 3.4%, respectively (TR 0.95; 95% CI 0.17–5.50; <i>p</i> = 0.879). <b><i>Conclusions:</i></b> In patients with intermediate HCC, PH was associated with increased long-term survival compared to TACE, with comparable postprocedural mortality. These results suggest considering PH as treatment option in intermediate HCC and highlight the urgent need to refine the selection of patients with BCLC-B stage who may benefit from PH.
DOI: 10.17632/c3n2tc6jf4
title: LitchiLeaf4001: A Comprehensive Dataset of Lychee Leaf Diseases for AI-Based Visual Diagnosis

description: LitchiLeaf4001 is a curated image dataset focused exclusively on lychee (Litchi chinensis) leaves. It was collected to support research and development in computer vision, machine learning, and deep learning for plant disease detection. This dataset is designed to empower the agricultural AI community, particularly in Bangladesh, where lychee is a commercially important fruit crop.

The dataset consists of 4,001 images captured from lychee orchards in three agriculturally diverse districts: Dhaka, Manikganj, and Gaibandha, between December 2024 and April 2025. It includes both healthy and diseased leaves affected by common visual conditions found in lychee plants.

Class Distribution:
1. Anthrax – 620 images
2. Curly Leaf – 368 images
3. Dried Leaf – 555 images
4. Healthy Leaf – 662 images
5. Insect Hole – 1,157 images
6. Yellow Mosaic Virus – 639 images.

Location: 
1. Dhaka: [Latitude (°N): 23.8103, Longitude (°E): 90.4125]
2. Manikganj: [Latitude (°N): 23.8617, Longitude (°E): 89.9333]
3. Gaibandha: [Latitude (°N): 25.3287, Longitude (°E): 89.5284]

Potential Applications:
1. Computer Vision: 
- Disease region detection and segmentation
- Leaf health visual feature extraction
- Real-time visual monitoring of lychee trees

2. Machine Learning:
- Multiclass classification of lychee leaf diseases
- Development of explainable AI (XAI) models for plant health assessment
- Decision support tools for agricultural advisors

3. Deep Learning:
- CNN-based disease recognition (e.g., InceptionV3, ResNet, MobileNet)
- Attention-based DL models for fine-grained disease spotting
- Integration with GANs for synthetic data augmentation

4. Smart Agriculture / AgriTech:
- Mobile-based plant disease diagnostic apps
- IoT-integrated crop monitoring systems
- Early warning systems for lychee disease outbreaks
DOI: 10.6084/m9.figshare.156395.v65
title: 2nd year Drosophila Developmental Genetics practical

description: This is the teaching material for the <em>Drosophila</em> module of the Developmental Genetics RSM (research skills module) held at the Faculty of Biology, Medicine and Health of The University of Manchester each year. This practical course runs over 6 days and is organised and supervised by Andreas Prokop. This module has been taught and optimised over a few years. Emphasis is on: <em>1) Drosophila</em> as a model system in research 2) the use of fly genetics (transgenic approaches and mutations) in combination with histological techniques to study mechanisms of development 3) transferable skills including how to design figures and their legends, how to compose laboratory protocols and how to file data securely This module also shows how practical work can be intercalated with exercises on applied fly genetics training, thus filling gaps in experimental protocols with useful activities, enriching the learning outcome and enhancing the fundamental understanding of <em>Drosophila</em> as a model organism. To make this genetics training accredited even on large courses, a novel hybrid e-assessment strategy has been developed, and we regularly apply it on our courses (50-65 students). This e-assessment and its principal strategies have been published in the G3 journal and a test exam is available online (3rd link below). Please, submit any comments in the comment box below or contact me directly: Andreas.Prokop@manchester. ac.uk Note, that a Powerpoint presentation "Roote+Prokop-SupplMat-3.ppt" is required on this module. It can be accessed from the second link below. It is also directly linked out from the two manuals in this resource.
DOI: 10.17632/k885hgbsmh
title: Data for: Parent-Child Mentalizing in Pediatric Epilepsy
DOI: 10.6084/m9.figshare.28736003.v1
title: sales

description: The dataset is a comprehensive sales pipeline report that records individual deals managed by various sales representatives. It includes details such as the reporting date, customer name, country, deal size, and sales stage. Each deal is also associated with a probability of closure, which is used to calculate a weighted forecast. The dataset captures the sales channel used, expected close date, and next steps for each deal. This data can be useful for tracking sales performance, forecasting revenue, and identifying opportunities in different regions and sales stages.
DOI: 10.6084/m9.figshare.3528545.v1
title: Appendix A. The method used for extracting functional response parameters from studies on avian herbivores.

description: The method used for extracting functional response parameters from studies on avian herbivores.
DOI: 10.17632/nvsxfcbzdk
title: The arXive dataset extract with high ROUGE score summaries generated by 5 different methods

description: The arXive dataset extract of 17,038 scientific articles with high ROUGE score summaries was generated by five different methods. The study in our paper "Reaching for the Upper Bound of Extractive Summarization Methods ROUGE score" aimed to discover the ROUGE score upper-boundary for Extractive Summarization methods.
DOI: 10.17632/xp3f7dzxnf
title: CTD and LADCP measurements in the Romanche Fracture Zone during cruise 62 of the R/V Akademik Ioffe in August, 2022

description: A detailed CTD/LADCP survey in the Romanche Fracture Zone was carried out during cruise 62 of the R/V Akademik Ioffe in August, 2022. The main idea of this survey was to measure abyssal currents of Antarctic Bottom Water and estimate its transport to the East Atlantic. The stations were located in the middle part of the fracture zone at the entrance to the Vema Deep (the deepest depression in the fracture zone). In total, 23 full water depth stations (down to 5865 m) were performed in three channels of the sill between two neighboring deep basins of the Romanche Fracture Zone. The rosette system General Oceanics GO1018 included Idronaut Ocean Seven 320 plus Conductivity-Temperature-Depth (CTD) probe and Lowered Acoustic Doppler Current Profiler (LADCP; 300 kHz Teledyne RD Instruments WorkHorse Monitor with an external battery package). The velocity profiler was set in the narrowband mode, which increases the profiling range in comparison with the broadband mode and allows more reliable processing of the raw data. We set 30 vertical bins of 8 m each with 1.76 m blank distance immediately below the transducer. The LADCP compass was calibrated before the cruise in the down looking mode according the standard procedure. The raw data were processed using the LDEO Software version IX_14. We stopped the casts at a distance of 5 m above the bottom using the altimeter (model Valeport VA500) and pinger of the Benthos Co. The combined use of a pinger and an altimeter allowed us to safely approach the bottom even in conditions of rough bottom topography. A 6000-m sea cable allowed measurements at any point of the sill. The main section across the fracture zone included eight stations (62025-62032) at a distance of 2.5-4.3 km from each other. Two background stations (62023 and 62045) were occupied at the adjacent Vavilov and Vema deeps. Date and time are indicated for the moment when the CTD was near the bottom; the ocean depth was determined based on the CTD pressure and altimeter records. Each station took approximately 4 hours (the descent and ascent rates of the CTD and LADCP profilers were 1 m/s); the entire survey took 4.5 days.
DOI: 10.17632/zb328g68zj
title: Replication files - The Leisure Gains from International Trade

description: These files presents the codes and data to replicate the findings of Velasquez, Agustin. 2025. The Leisure Gains from International Trade - Journal of International Economics.
DOI: 10.6084/m9.figshare.1494590.v8
title: Activation of new replication foci under conditions of replication stress

description: DNA damage, binding of drugs to DNA or a shortage of nucleotides can decrease the rate or completely halt the progress of replication forks. Although the global rate of replication decreases, mammalian cells can respond to replication stress by activating new replication origins. We demonstrate that a moderate level of stress induced by inhibitors of topoisomerase I, commencing in early, mid or late S-phase, induces activation of new sites of replication located within or in the immediate vicinity of the original replication factories; only in early S some of these new sites are also activated at a distance greater than 300 nm. Under high stress levels very few new replication sites are activated; such sites are located within the original replication regions. There is a large variation in cellular response to stress – while in some cells the number of replication sites increases even threefold, it decreases almost twofold in other cells. Replication stress results in a loss of PCNA from replication factories and a twofold increase in nuclear volume. These observations suggest that activation of new replication origins from the pool of dormant origins within replication cluster under conditions of mild stress is generally restricted to the original replication clusters (factories) active at a time of stress initiation, while activation of distant origins and new replication factories is suppressed.
DOI: 10.17632/pffnhth7xd
title: Experimental water sorption isotherms and mid-infrared spectra of parchment coffee beans processed by wet and semi-dry postharvest methods

description: The experimental data collated correspond to the water sorption isotherms of dried parchment coffee beans processed by different postharvest methods (wet and semi-dry) and their mid-infrared spectra. This data is the basis for mathematically estimating relevant parameters related to the dried parchment coffee beans' water stability and hygroscopic behavior. Furthermore, the experimental data provide a reliable tool to optimize the coffee storage process and to gain insights into the water-sorption process. These data were summarized in Excel sheets according to the experimental conditions and replicates.
DOI: 10.25438/wes02.26124355.v3
title: Google 2022 election ads—core dataset

description: <b>Cross-platform Election Advertising Transparency Initiative (CREATIVE):</b> dataset of final variables including ad metadata, labels, and classification results for all advertising obtained from Google that ran during the 2022 general election period. Raw textual fields are excluded for ease of general user.<br>For more information, please visit our website: https://www.creativewmp.com/.<br>The Variable Description Table file contains brief descriptions for each variable in the dataset. The Variable Description Table is identical across all four repositories, so it only needs to be downloaded once.<br>
DOI: 10.6084/m9.figshare.13200314.v1
title: Template_preliminary literature scoping.xlsx

description: It is template that was generated during the process to collect data fields from articles.
DOI: 10.6084/m9.figshare.23995755.v1
title: Dataset1_test.tsv

description: This file contains the testing protein sequences for Dataset1
DOI: 10.6084/m9.figshare.25298725.v1
title: Virulence genes (in-house database)

description: Results of virulence genes –assemblies’ screening- using Abricate v1.0.1 and an in-house virulence genes database for 98 CA-MRSA isolates causing infections in children in Spain.
DOI: 10.6084/m9.figshare.28806383.v1
title: Behavioural Data

description: Behavioural data of participants solving a perceptual insight task in "Löwe, A.T.*, Petzka, M.*, Tzegka, M. & Schuck, N. W. N2 sleep promotes the occurrence of 'aha' moments in a perceptual insight task."
DOI: 10.6084/m9.figshare.28807016.v1
title: D Social Media .xlsx

description: Social media use
DOI: 10.17632/3393gkpdhf
title: Dataset on Biogas Production using Poultry Dropping and Cassava Peel

description: This Data shows the daily Biogas Production using Poultry Dropping and Cassava Peel.
DOI: 10.6084/m9.figshare.12094962.v1
title: An Overview of Laser Engineered Net Shaping of Ceramics

description: ABSTRACT Additive manufacturing (AM) has provided huge versatility in geometry and materials, allowing new products and processes in several areas to be created. Laser Engineered Net Shaping (LENS) is an additive manufacturing process created in 1995 that allows building high-density metals and ceramics parts with no need for further operation. This manuscript aims to study the scientific literature about the process of Laser Engineered Net Shaping related to ceramics. After a systematic review, the articles were grouped into three categories: ceramic coating and AM of ceramics and AM of composites with ceramic reinforcement. Raw materials, substrates, applications, process parameters, and the obtained properties were analyzed and summarized for each group. Most of the additive manufacturing of ceramic parts are related to alumina, which present similar properties when compared to the traditionally manufactured ones. Recent works have the aid of an ultrasonic vibration to homogenize the in-process material, reduce cracks and improve mechanical properties. The additive manufacturing of composites with ceramic reinforcement has been used to create functionally graded composites materials with increased hardness, while the ceramic coating has been employed to manufacture biocompatible coating with increased hardness and low wear rate. Moreover, an additive manufacturing timeline including Laser Engineered Net Shaping landmarks is presented.
DOI: 10.6084/m9.figshare.19733656.v1
title: 10 Ganoderma genomes

description: 10 Genome assemblies for 10 Ganoderma species.
DOI: 10.6084/m9.figshare.26342614.v1
title: <b>TetraDENSITY 2.0 – A database of population density estimates in Tetrapods</b>

description: Data in "Santini L., Mendez Angarita V.Y., Karoulis, C., Fundarò D., Pranzini N., Vivaldi C., Zhang T., Zampetti A., Gargano S.J., Mirante D., Paltrinieri L. TetraDENSITY 2.0 – A database of population density estimates in Tetrapods. Global Ecology & Biogeography, doi: 10.1111/geb.13929"including two csv files reporting all data and respective bibliographic references, and one txt file reporting the metadata.
DOI: 10.6084/m9.figshare.3795564.v1
title: Dataset for the paper titled "The statistical determinants of the speed of motor learning"

description: This is the raw data for a 2016 PLoS Computational Biology paper authored by Kang He, You Liang, Mona Fisher Bittmann, Farnaz Abdollah, Konrad Kording and Kunlin Wei.
DOI: 10.15468/dl.bxeb3f
title: Occurrence Download

description: A dataset containing 430 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salsola kali L.",
 "Country is Israel"
 ]
}

 The dataset includes 430 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013089-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25230077.v1
title: Green Algae Phylogenetics Data Files

description: Files for green algae transcriptome phylogenetics analysis.
DOI: 10.6084/m9.figshare.12494654.v4
title: bibliometric_DFT

description: Data for: Authorship and citation cultural nature in Density Functional Theory from solid state computational packages.CSV file containing 134,586 papers citing at least one of the 31 main DFT packages/software. <br>9 columns: authors, title, number of citations, year of publication, Unique WoS ID number, document type, countries of affiliation, number of pages and name of DFT code cited.<br>All observations for one code have been stripped from duplicates, based on the unique identifier of the papers. However, if using the whole dataset, there will be duplicates as one paper can cite several codes.<br><br>Authors and countries are separated by a semicolon within one column in the original file. The preview shows authors and countries separated in several columns but when downloaded, the data is correctly placed within the columns.<br>
DOI: 10.6084/m9.figshare.12881525.v1
title: DiNV genome

description: The genome and annotation of Drosophila innubila nudivirus in fata format
DOI: 10.6084/m9.figshare.28408349.v1
title: Climate-driven warming disrupts the symbiosis of bobtail squid <i>Euprymna scolopes</i> and the luminous bacterium <i>Vibrio fischeri</i>

description: Dataset and R script for the manuscript "Climate-driven warming disrupts the symbiosis of bobtail squid <i>Euprymna scolopes</i> and the luminous bacterium <i>Vibrio fischeri"</i>