cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/ngzmj4zkms.1
title: Data for: Human Gut Microbiota from Autism Spectrum Disorder Promote Behavioral Symptoms in Mice

description: Raw data (excluding raw sequencing and metabolomic data) used to construct figures for manuscript. Data is predominantly in csv or tsv format. qza and qzv files are QIIME2 outputs and can be viewed at https://view.qiime2.org/ . mat files are mat lab datasets. Human Gut Microbiota from Autism Spectrum Disorder Promote Behavioral Symptoms in Mice Gil Sharon1,*, Nikki Jamie Cruz1, Dae-Wook Kang2,3,21, Michael J. Gandal4,5,6,7, Bo Wang1, Young-Mo Kim8, Erika M. Zink8, Cameron P. Casey8, Bryn C. Taylor9, Christianne J. Lane10, Lisa M. Bramer11, Nancy G. Isern8, David W. Hoyt8, Cecilia Noecker12, Michael J. Sweredoski1, Annie Moradian1, Elhanan Borenstein12,13,14,15,16, Janet K. Jansson8, Rob Knight17,18,19, Thomas O. Metz8, Carlos Lois1, Daniel H. Geschwind4,5,6, Rosa Krajmalnik-Brown2,3, and Sarkis K. Mazmanian1,20,* Autism spectrum disorder (ASD) manifests as alterations in complex human behaviors including social communication and stereotypies. In addition to genetic risks, the gut microbiome differs between typically-developing (TD) and ASD individuals, though it remains unclear whether the microbiome contributes to symptoms. We transplanted gut microbiota from human donors with ASD and TD controls into germ-free mice, and reveal that colonization with ASD microbiota was sufficient to induce hallmark autistic behaviors. The brains of mice colonized with ASD microbiota display alternative splicing of ASD-relevant genes. Microbiome and metabolome profiles of mice harboring human microbiota predict that specific bacterial taxa and their metabolites modulate ASD behaviors. Indeed, treatment of an ASD mouse model with candidate microbial metabolites improves behavioral abnormalities and affects neuronal excitability in the brain. We propose that the gut microbiome modulates behaviors in mice via production of neuroactive metabolites, suggesting that gut-brain connections contribute to the pathophysiology of ASD.
DOI: 10.5281/zenodo.2943248
title: X-ray diffraction dataset (PDB ID 6OWW, Human Cardiac Calsequestrin Complexed with Ytterbium)

description: X-ray diffraction dataset corresponding to PDB ID 6OWW (Crystal structure of a Human Cardiac Calsequestrin Filament Complexed with Ytterbium)
DOI: 10.7910/dvn/pkkxoe/dhs5tp
title: 180921_aDN_PR_Fly10_005_SG1_behData_images.zip

description: :unav
DOI: 10.17632/kcxhs5ky5z.1
title: Data for: Does the element composition of soils of restored wetlands resemble natural wetlands?

description: Online Supplement 1: Quality Assurance of the analysis Online Supplement 2: raw data
DOI: 10.17632/y7pkhkc4d5.1
title: Data for Separation of olefins from FCC naphtha by propylene carbonate: Influence of critical component structure and correlation of ternary LLE thermodynamic models

description: Submitting an article.
DOI: 10.5281/zenodo.2943247
title: X-ray diffraction dataset (PDB ID 6OWW, Human Cardiac Calsequestrin Complexed with Ytterbium)

description: X-ray diffraction dataset corresponding to PDB ID 6OWW (Crystal structure of a Human Cardiac Calsequestrin Filament Complexed with Ytterbium)
DOI: 10.17632/66p3c4xzkj.1
title: Parvimico materdei gen. et sp. nov.: A new platyrrhine from the Early Miocene of the Amazon Basin, Peru
DOI: 10.17632/7n6zhxh37s.1
title: AMD contrast and Lateral Interaction
DOI: 10.17632/mrpspn2spj.1
title: Melanoma Survivor versus Death Narratives 2
DOI: 10.5281/zenodo.3235245
title: PROGRAMS project. Axis test on FIDIA Cortini L300 on 2019-05-21

description: Current and position data were recorded during linear axis movements to create a reference for future comparison.
DOI: 10.5281/zenodo.3235246
title: PROGRAMS project. Axis test on FIDIA Cortini L300 on 2019-05-21

description: Current and position data were recorded during linear axis movements to create a reference for future comparison.
DOI: 10.17632/8xxw6xtfgr.1
title: BDTTprocessed
DOI: 10.25345/c5891g
title: MassIVE MSV000083874 - Organ proteomics of germ free and conventional mice
title: A proteomic dataset comparing organ tissue differences between germ-free mice to conventional mice. Additional files include supplementary tables for reanalysis.
DOI: 10.5281/zenodo.3234907
title: MAUPP: 20 Years of Urban Expansion in Sub-Saharan Africa

description: This dataset contains 20 years of urban expansion data for 46 case studies located in Sub-Saharan Africa. For more information, see the MAUPP website. The dataset can also be explored from your browser in an interactive web map. For each case study, the following files are provided:

<pre>Filename: builtup_&lt;year&gt;.tif
Format: GeoTIFF [UINT8]
Description: Binary built-up data for each year.
Legend: 0=Not built-up; 1=Built-up.

Filename: builtup_history.tif
Format: GeoTIFF [UINT8]
Description: Age of the built environment.
Legend: 0=Not built-up; 1=Before 1995; 2=1995-2000; 3=2000-2005; 4=2005-2010;
5=2010-2015.

Filename: expansion_&lt;year1&gt;_&lt;year2&gt;.tif
Format: GeoTIFF [UINT8]
Description: Characterization of urban expansion between &lt;year1&gt; and &lt;year2&gt;.
Legend: 1=Existing built-up; 2=Infill; 3=Expansion; 4=Leapfrog.

Filename: training_samples.tif
Format: GeoTIFF [UINT8]
Description: Training samples extracted from OpenStreetMap.
Legend: 1=Built-up; 2=Not built-up.

Filename: aoi.geojson
Format: GeoJSON
Description: Area of interest (EPSG:4326).

Filename: validation.json
Format: JSON
Description: Validation metrics.

Filename: metadata.json
Format: JSON
Description: Creation date, source data, CRS, country, city.</pre>
DOI: 10.5281/zenodo.3234908
title: MAUPP: 20 Years of Urban Expansion in Sub-Saharan Africa

description: This dataset contains 20 years of urban expansion data for 46 case studies located in Sub-Saharan Africa. For more information, see the MAUPP website. The dataset can also be explored from your browser in an interactive web map. For each case study, the following files are provided:

<pre>Filename: builtup_&lt;year&gt;.tif
Format: GeoTIFF [UINT8]
Description: Binary built-up data for each year.
Legend: 0=Not built-up; 1=Built-up.

Filename: builtup_history.tif
Format: GeoTIFF [UINT8]
Description: Age of the built environment.
Legend: 0=Not built-up; 1=Before 1995; 2=1995-2000; 3=2000-2005; 4=2005-2010;
5=2010-2015.

Filename: expansion_&lt;year1&gt;_&lt;year2&gt;.tif
Format: GeoTIFF [UINT8]
Description: Characterization of urban expansion between &lt;year1&gt; and &lt;year2&gt;.
Legend: 1=Existing built-up; 2=Infill; 3=Expansion; 4=Leapfrog.

Filename: training_samples.tif
Format: GeoTIFF [UINT8]
Description: Training samples extracted from OpenStreetMap.
Legend: 1=Built-up; 2=Not built-up.

Filename: aoi.geojson
Format: GeoJSON
Description: Area of interest (EPSG:4326).

Filename: validation.json
Format: JSON
Description: Validation metrics.

Filename: metadata.json
Format: JSON
Description: Creation date, source data, CRS, country, city.</pre>
DOI: 10.5519/qd.09nvqiyo
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.5519/qd.vvhkd2h0
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.14457/cu.the.2013.587
title: PARTICIPATION OF PEOPLE WITH DISABILITIES IN THE LABOUR MARKET: THE ROLE OF VOCATIONAL TRAINING

description: This study aims to identify the notion of obtaining job opportunities for people with disabilities (PWDs) in Myanmar. The issue of getting a job is incredibly significant to improving living standards, getting a better income and increasing self-esteem in society. Regarding international human rights treaties, PWDs have equal rights to access public transportation accessibility and live independently in society. However, PWDs are still struggling twice as much in society to access vocational trainings, job opportunities and improve income in Myanmar. Thus, many organizations also aim to create job opportunities and income credibility by supporting various vocational trainings. For instance, understanding the challenges of vocational designs, the hardships of participating in the employment market, and limitations in accessing job opportunities are extremely important issue to analyze for creating job opportunity for PWDs. This study analyzes the teaching design of vocational trainings, the application of trainees in the community, the aspect of formal and informal employers and the planning of vocational institutions which attempts to find employment opportunities for PWDs. In particular, this study interviews: 1) vocational institutions which train persons with physical and visual impairments, 2) formal employers, 3) informal businesses of PWDs, 4) different key informants from DPOs, private vocational schools and related government sectors in Yangon, Myanmar.Key findings in this study found that vocational training explicitly focused on rehabilitation and could only provide basic vocational skills, which are not adequate in order to participate in the labor market directly. Consequently, full participation in education is a crucial starting point to access vocational training and enter the labor market. When considering employment opportunities for PWDs, market-oriented vocational training and state intervention could bring more job opportunities for PWDs in practice.
DOI: 10.14457/cu.the.2013.589
title: Vulnerability and Migration of Small-Scale Fishing and Fishing-Farming Households around Tonle Sap Lake

description: More than one million people live near the Tonle Sap Lake and many of them, in particular, small scale fishing households, are dependent on fish resources to secure their livelihood. However, in recent years, the declining fish stocks in the lake have been reported to have made it difficult for fishing dependent households to meet basic needs and survive shocks, causing them to become more vulnerable. One of livelihood strategies to minimize this vulnerable situation is migration. This thesis investigates the extent to which migration, as a livelihood strategy, has been adopted by both small scale fishing and fishing-farming households to reduce vulnerability around the Tonle Sap Lake. This study applied the framework of “Drivers of Migration”, by Black et al (2011) and was conducted using a qualitative case study approach in Prek Trob village of Battambang province in Cambodia. The study found that, when the fish stock declined and when there were harvesting problems, there was a need for the study community to respond to the problem by diversifying sources of income.  Migration, as livelihood strategy, was one response adopted by this community as it had the potential to minimize the livelihood vulnerability. The movement of people was driven by multiple triggers and interacting drivers of migration including environmental, social, economic, demographical, and political in both areas of origin and destination. Remittances that were sent home were reported to be useful to pay back debts, purchase food and pay for the cost of farming production, especially for fishing-farming households. The research revealed that Thailand has increasingly become a work destination of choice for both fishers and fisher-farmers and that there was a pattern of short-term, seasonal and long-term migration  Those that to migrated for work preferred to do so illegally because they were able to save time and money especially when the cost of passports and traveling was high.This case study has revealed two main policy implications: livelihood vulnerability and migration. It was found that the level of vulnerability had a close link with resource degradation and limited access to fish and land resources. Migration was another critical area for policy makers. The illegal preference for migration to Thailand for employment implied a weakness of migration and employment policies as well as slow implementation of policies by government ministries and departments. It, therefore, required the revisiting of relevant policies to reduce vulnerability of households through improving equitable access to potentially fishery resources, farming and land and minimizing the risks of migration.
DOI: 10.14457/cu.the.2013.590
title: Governance and Changes of Economic and Food Security In Myanmar: Case Study of Letpadaung Copper Mine

description: This thesis evaluates the governance of Letpadaung copper mine project from the beginning of the project. Since 2010, the Union of Myanmar Economic Holding Ltd_(MEHL) has implemented the Letpadaung copper mine project in Sagaing State as a joint venture with Chinese companies. The thesis investigates the relationship between poor governance at the project and environment and social damages associated with the project that has impacted the economic and food security of thousands of local villagers who live around Letpadaung Mountain. These villagers alongside students and monks have protested against the copper mine and attracted the support of Media, NGOs and political parties. Letpadaung copper mine has emerged as one of the most important issues in Myanmar.This research focuses on the decision making or Letpadaung project and the participation, transparency and accountability of the different actors that shape the governance of the project area. This study also evaluates changes in human security of local people due to the implementation of the project, especially changes of economic and food security. The research used qualitative methods including semi-structure interviews, key-informants interview, group discussion and observationThe thesis conclude that implementation of Letpadaung copper mine project has affected the economic and food security of local communities. The implementations of the governance mechanisms (Participation, Transparency and Accountability) are poor, which has thereby failed to recognize and redress negative impacts on economic and food security of local communities.
DOI: 10.25919/5ceed4263d0d8
title: Parkes observations for project P456 semester 2019APRS_23

description: The Parkes Pulsar Timing Array (PPTA) project has three primary goals: (a) detection of gravitational waves from astronomical sources, (b) establishment of a pulsar timescale, and (c) improvement of our understanding of Solar-system dynamics. The PPTA is the oldest of three international pulsar timing groups. We have the smallest telescope and the smallest group, but the best measurements and the best results. Our bound on the strength of the incoherent gravitational wave background is the only bound which significantly constrains theoretical models. We have maintained our leading position because: we have the southern sky; we have a small but well-focussed group; we have the best-calibrated receivers; and we have been able to observe with an almost regular cadence of 15 to 20 days over a wide bandwidth. With this proposal we aim to maintain our pre-eminent position in the field.

Unlike most observing proposals, this is a continuing proposal for which the observations will continue to improve bounds on ultra-low-frequency gravitational waves until they are finally detected. Continued Parkes observations will remain valuable at least until the first stage of the SKA is able to improve on our sensitivity and observing cadence. Even after the gravitational wave background is detected we will want to continue observations in support of the nascent field of gravitational wave astronomy!
DOI: 10.17632/8fsbymnh6s.1
title: chromium isotopes of chromite in ophiolite

description: This is the first Cr isotope data for orthopyroxene, olivine and chromite in residual harzburgite, dunite and chromitite from the mantle-crust transition zone and upper mantle parts of the Kızıldağ ophiolite, SE Turkey.
DOI: 10.17632/cgjf78m9hy.3
title: Motion, fixation probability and the choice of an evolutionary process

description: One folder contains the code with which all simulations can be reproduced. The second folder contains all the simulation results necessary for the reproduction of the figures in the research article of the same title.
DOI: 10.25919/5ceed50b704c1
title: Parkes observations for project P456 semester 2019APRS_24

description: The Parkes Pulsar Timing Array (PPTA) project has three primary goals: (a) detection of gravitational waves from astronomical sources, (b) establishment of a pulsar timescale, and (c) improvement of our understanding of Solar-system dynamics. The PPTA is the oldest of three international pulsar timing groups. We have the smallest telescope and the smallest group, but the best measurements and the best results. Our bound on the strength of the incoherent gravitational wave background is the only bound which significantly constrains theoretical models. We have maintained our leading position because: we have the southern sky; we have a small but well-focussed group; we have the best-calibrated receivers; and we have been able to observe with an almost regular cadence of 15 to 20 days over a wide bandwidth. With this proposal we aim to maintain our pre-eminent position in the field.

Unlike most observing proposals, this is a continuing proposal for which the observations will continue to improve bounds on ultra-low-frequency gravitational waves until they are finally detected. Continued Parkes observations will remain valuable at least until the first stage of the SKA is able to improve on our sensitivity and observing cadence. Even after the gravitational wave background is detected we will want to continue observations in support of the nascent field of gravitational wave astronomy!
DOI: 10.5519/qd.3rchcsjl
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (98 records)
DOI: 10.3886/e100721v3
title: Self-Reported Marriage Practices in Bosnia-Herzegovina, 2014

description: The study examines Bosnia's cultural heritage as exemplified in marriage customs shared by different ethnic groups, in particular, engagement parties, elopements, bride kidnapping, traditional weddings, religious ceremonies, civil ceremonies, affinal visitations, fictive kinship, and religious endogamy. One purpose is study how marriage customs in Bosnia-Herzegovina reflect both a trans-ethnic heritage shared by Bosnians as a national group and particular ethnic heritages specific to different ethnic groups. A second purpose is to consider the variation of these marriage customs both over time and in relation to age, ethnicity, education, religiosity, and type of settlement. A third purpose is to assess the impact on these cultural practices of the past war from 1992-1996 and measure the resilience of this heritage since the war.<br>
description: See survey report for sampling procedures and interviewing protocols.
description: Population of Bosnia-Herzegovinia
DOI: 10.5281/zenodo.3234910
title: Human Galatose-1-phosphate Uridylyltransferase (GALT)

description: This project describes a drug discovery plan for Classic Galactosemia, a rare disorder of galactose metabolism where there is currently no disease-transforming therapy. This TEP provides the protein reagents, biophysical assays, and structural information to facilitate two aspects of galactosemia research: (i) to understand the molecular basis of the disease due to defective GALT enzyme, and (ii) to provide chemical starting points to explore metabolic intervention of the upstream enzyme GALK1 aimed at mitigating the GALT defect (substrate reduction).
description: Future versions of this document will contain experimental data about the HAO1 TEP.
DOI: 10.3886/e109906v1
title: Self-Reported Marriage Practices in Bosnia-Herzegovnia, 2017

description: The survey study examines Bosnia's cultural heritage as exemplified in marriage customs shared by different ethnic groups, in particular, engagement parties, elopements, bride kidnapping, traditional weddings, religious ceremonies, civil ceremonies,dowry,  affinal visitations, fictive kinship, religious endogamy, fictive kinship endomgamy, and whether family members (mother or siblings) eloped to marry. One purpose is study how marriage customs in Bosnia-Herzegovina reflect both a trans-ethnic heritage shared by Bosnians as a national group and particular ethnic heritages specific to different ethnic groups. A second purpose is to consider the variation of these marriage customs both over time and in relation to age, ethnicity, education, religiosity, and type of settlement. A third purpose is to assess the impact on these cultural practices of the past war from 1992-1996 and measure the resilience of this heritage since the war.
description: See survey report for sampling procedures, response rate, data source, collection mode,  and interviewing protocols.
description: Population of Bosnia-Herzegovina
DOI: 10.5281/zenodo.3234923
title: ParaVision Mouse, Rat, and Lemur Testing Data for SAMRI

description: This is a testing data set encompassing mouse, rat, and lemur MRI data, acquired with diverse protocols, and stored in the Bruker ParaVision format. It serves as a demo and testing substrate for the SAMRI software package.
DOI: 10.5281/zenodo.3234924
title: ParaVision Mouse, Rat, and Lemur Testing Data for SAMRI

description: This is a testing data set encompassing mouse, rat, and lemur MRI data, acquired with diverse protocols, and stored in the Bruker ParaVision format. It serves as a demo and testing substrate for the SAMRI software package.
DOI: 10.6073/pasta/440a54e9bf6dbcb843121bef5e2befdb
title: Couloir air temperature and precipitation data for Niwot Ridge and Kiowa Peak, 1992 - 1993.

description: Air temperature and precipitation were measured on a biweekly basis, during the summer months, within couloirs above the Green Lakes and Isabelle Valleys. Tru-Chek wedge shaped rain gauges were mounted on the south side of wooden stakes so that the orifice was approximately 52 cm above the surface. The water depth (mm) in the gauge was recorded. On subsequent visits the new water depth was recorded and the reset water depth was recorded. Gauges contained 3-4 mm of oil to retard evaporation, and were emptied (reset) when water depth exceeded 50 mm or when insect accumulations exceeded 10 mm. Taylor Instruments Min-Max thermometers were mounted approximately 50 cm above ground on the north side of the same stakes, sheltered by tin and plastic shields. The current time, current temperature, maximum and minimum air temperature were recorded. Minimum and maximum air temperature markers were reset to the current temperature. Proximity to the surface and inadequate shielding resulted in anomalously high temperature readings, particularly on sunny days.
DOI: 10.25919/5cef3ab563e78
title: Parkes observations for project P1011 semester 2019APRS_06

description: Pulsars with features in their radio spectra, such as curvature or breaks seem to be special cases among the known pulsar population, with only about 20 per cent exhibiting them. Unfortunately, reliable flux density measurements besides at 1.4 GHz are often unavailable, so that their spectral morphologies and features cannot be determined accurately. We propose to utilize the unique capabilities of the newly commissioned UWL receiver at the Parkes telescope, its extremely wide instantaneous frequency coverage from about 700 to 4000 MHz together with its high sensitivity, to determine the spectra of 26 radio pulsars. These have previously been identified to exhibit spectral features or show hints thereof. The new Parkes data are crucial to determine their spectral morphologies in that frequency range, to characterize their spectral features and to resolve these within the recorded bandwidth. Our aim is to understand the physical origin of the features, namely, whether these are perhaps intrinsic to the pulsar emission in these sources, are caused by absorption processes inside the pulsar's magnetosphere, or along the line of sight.