cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9125390.v1
title: Prevalence of Atrial Fibrillation in Patients with Retinal Vessel Occlusion and Its Association: A Systematic Review and Meta-Analysis

description: <b>Objective</b>: Recent studies have shown that atrial fibrillation (AF) is more prevalent in patients with retinal vessel occlusion and may be associated with both central retinal artery occlusion (CRAO) and central retinal vein occlusion (CRVO). However, there is no systematic review and meta-analysis to confirm this finding. <b>Methods</b>: We searched the databases of MEDLINE and EMBASE from inception to January 2019. Included studies were published cohort, case-control or cross-sectional studies, and randomized control trials reporting the prevalence of AF in patients with CRAO or CRVO. Data from each study were combined using the random-effects model. <b>Results</b>: Eleven studies were included in our meta-analysis, involving a total population of 12,305 subjects with retinal vessel occlusion. The prevalence of AF ranged from 4.1% to 21.4% (pooled prevalence = 11.5%, 95% CI: 7.0–16.1, I<sup>2</sup> = 96.3%). Five studies reported a control group of patients without retinal vessel occlusion. We found that AF is significantly associated with retinal vessel occlusion (pooled OR = 2.24, 95% CI:2.07–2.43, I<sup>2</sup> = 0.0%). <b>Conclusion</b>: Our study showed that AF is significantly associated with retinal vessel occlusion. Further studies are needed to fully elucidate the exact mechanism linking AF with CRAO and CRVO.
DOI: 10.6084/m9.figshare.9125957.v2
title: Chapitre 4 Supplementary

description: Chapitre 4 Supplementary
DOI: 10.25375/uct.9125285
title: Data from: New insights into population structure of the European golden eagle (Aquila chrysaetos) revealed by microsatellite analysis

description: This dataset is the foundation of the paper published in the Biological Journal of the Linnean Society with the title: "New insights into population structure of the European golden eagle (<i>Aquila chrysaetos</i>) revealed by microsatellite analysis."The dataset is in the commonly used STRUCTURE format and can be easily converted using software.<br> <br>Abstract:Connectivity between golden eagle (<i>Aquila chrysaetos</i>) populations is poorly understood. Field studies exploring the natal dispersal picture this raptor as a philopatric species, but with the ability to roam far. However little is known about the species’ population structure in Europe. Our study is based on 14 microsatellite loci and is complemented by novel and previously published mitochondrial control region DNA data. The present dataset includes 121 eagles from Scotland, Norway, Finland, Estonia, the Mediterranean and Alpine region. Our sampling focused on the Alpine and Mediterranean populations as both mtDNA lineages found in golden eagles – the Holarctic and the Mediterranean – are known to co-occur there. Cluster analyses of nuclear DNA support a shallow split into northern and southern populations in Europe, similar to the distribution of the two mtDNA lineages with the Holarctic one occurring in the north and the Mediterranean predominating in the south. Additionally, Scotland shows significant differentiation and low relative migration levels that indicate isolation from the mainland populations. Alpine and Mediterranean golden eagles do not show nuclear structure corresponding to divergent mtDNA lineages. This indicates that the presence of northern Holarctic mitochondrial haplotypes in the Alps and the Mediterranean is due to past admixture rather than recent long-distance dispersal. <br>
DOI: 10.6084/m9.figshare.9125294.v1
title: Chapitre 2 Supplementary

description: Chapitre 2 Supplementary
DOI: 10.6084/m9.figshare.9125351
title: Chapitre 1 Supplementary

description: Chapitre 1 Supplementary
DOI: 10.6084/m9.figshare.9125735
title: Chapitre 3 Supplementary

description: Chapitre 3 Supplementary<br>
DOI: 10.6084/m9.figshare.9125735.v1
title: Chapitre 3 Supplementary

description: Chapitre 3 Supplementary<br>
DOI: 10.6084/m9.figshare.9125957
title: Chapitre 4 Supplementary

description: Chapitre 4 Supplementary
DOI: 10.6084/m9.figshare.9125957.v1
title: Chapitre 3 Supplementary

description: Chapitre 4 Supplementary
DOI: 10.6084/m9.figshare.9133553
title: Founder effect of the Glu89Gln <i>TTR</i> mutation in the Bulgarian population

description: Hereditary transthyretin amyloidosis is an autosomal dominant genetic disorder caused by missense mutations in the <i>TTR</i> gene resulting in amyloid formation of the transthyretin protein. Depending on the system affection, the manifestations may be different and high heterogeneity in the penetrance is observed. An endemic region in Bulgaria exists where the <i>TTR</i> mutation Glu89Gln is found with high frequency. This is a rare mutation and was probably introduced in the population by a common ancestor. This phenomenon, called “founder effect” was proved in carrier families by haplotype analysis of microsatellite markers showing linkage disequilibrium. Allele frequencies were analyzed and haplotype reconstruction was done with Arlequin v.3.01 software. The common ancestry of the carriers was demonstrated using additional data for their genealogies and microsatellite data from a control group of non-affected individuals. The results show that the mutation Glu89Gln is linked to one haplotype, called “hypothetical founder haplotype” which was compared to published haplotype data from other European patients and no similarity was found. Further population genetics studies of carriers of the Glu89Gln mutation from other endemic regions are required in order to clarify the geographical distribution of the mutation.
DOI: 10.6084/m9.figshare.9133553.v1
title: Founder effect of the Glu89Gln <i>TTR</i> mutation in the Bulgarian population

description: Hereditary transthyretin amyloidosis is an autosomal dominant genetic disorder caused by missense mutations in the <i>TTR</i> gene resulting in amyloid formation of the transthyretin protein. Depending on the system affection, the manifestations may be different and high heterogeneity in the penetrance is observed. An endemic region in Bulgaria exists where the <i>TTR</i> mutation Glu89Gln is found with high frequency. This is a rare mutation and was probably introduced in the population by a common ancestor. This phenomenon, called “founder effect” was proved in carrier families by haplotype analysis of microsatellite markers showing linkage disequilibrium. Allele frequencies were analyzed and haplotype reconstruction was done with Arlequin v.3.01 software. The common ancestry of the carriers was demonstrated using additional data for their genealogies and microsatellite data from a control group of non-affected individuals. The results show that the mutation Glu89Gln is linked to one haplotype, called “hypothetical founder haplotype” which was compared to published haplotype data from other European patients and no similarity was found. Further population genetics studies of carriers of the Glu89Gln mutation from other endemic regions are required in order to clarify the geographical distribution of the mutation.
DOI: 10.6084/m9.figshare.9133835.v1
title: Memory and pedagogy of Gurbāṇī Saṅgīta: An autoethnographic Udāsī<sup>*</sup>

description: In 1989, I began an undertaking to revive the nearly-extinct Gurbāṇī Saṅgīta tradition, the centuries-old Gur-Sikh heritage. I located <i>vidyādhārīs</i> (knowledgeable memory bearers) who remembered original rāga forms and <i>śabadrītas</i> (Gurbāṇī compositions), knew how to play or make musical instruments that had all but vanished, and were versed in the exegetical attendance of Srī Gurū Graṅth Sāhib, the scriptural Gurū of the GurSikh Paṅth. Carefully sifting through the memory of the last remaining elders I could track, I started by harnessing everything that I could – irrespective of their familial or musical lineages. In this paper, I take stock of and analyse the <i>kalāmī</i> (written), <i>tantrī</i> (audio-visual) and, <i>zubānī</i> (memorised) assets that I was able to recover through my fieldwork across South Asia and beyond, including compositions, notations, stories, and pedagogical processes. In my judgement, it is impossible to understand the music of early modern India, including dhurpada and mridaṅga/pakhāwaj, without careful study of the Gurbāṇī Saṅgīta tradition and the riches it has transmitted to the present.
DOI: 10.6084/m9.figshare.9133835
title: Memory and pedagogy of Gurbāṇī Saṅgīta: An autoethnographic Udāsī<sup>*</sup>

description: In 1989, I began an undertaking to revive the nearly-extinct Gurbāṇī Saṅgīta tradition, the centuries-old Gur-Sikh heritage. I located <i>vidyādhārīs</i> (knowledgeable memory bearers) who remembered original rāga forms and <i>śabadrītas</i> (Gurbāṇī compositions), knew how to play or make musical instruments that had all but vanished, and were versed in the exegetical attendance of Srī Gurū Granth Sāhib, the scriptural Gurū of the GurSikh Panth. Carefully sifting through the memory of the last remaining elders I could track, I started by harnessing everything that I could – irrespective of their familial or musical lineages. In this paper, I take stock of and analyse the <i>kalāmī</i> (written), <i>tantrī</i> (audio-visual) and, <i>zubānī</i> (memorised) assets that I was able to recover through my fieldwork across South Asia and beyond, including compositions, notations, stories, and pedagogical processes. In my judgement, it is impossible to understand the music of early modern India, including dhurpada and mridaṅga/pakhāwaj, without careful study of the Gurbāṇī Saṅgīta tradition and the riches it has transmitted to the present.
DOI: 10.6084/m9.figshare.9159746.v1
title: Seegene vs Aptima.xlsx

description: Database of the comparison of Allplex assay and Aptima assay.<br><br>Abbreviations:<br>CT: C. trachomatis;GC: N. gonorrhoeae; MG: M. genitalium TV: T. vaginalis; M: Male; F:Female
DOI: 10.25386/genetics.7757252
title: Supplemental Material for Ollhoff et al., 2019

description: Table S1. iSelect SNP physical positionsTable S2. Days after planting BLUPs for BRIDG6Table S3. SNP annotations for SNPs in HvPpd-H1 locus.Table S4. Effect of subsampling different numbers of families and lines from the BRIDG6 population on QTL detection for flowering time. Table S5. Flowering time related genes in barley<br><br>Figure S1 Distribution of average FST between the BRIDG6 parents and the NSGC accessions.<br>Figure S2 Distribution of allele effect estimates at all QTL for flowering time. The frequency of observations (Y-axis) are plotted at each allele effect relative to Rasmusson (X-axis). Estimates are the maximum allele effect per family for any significant SNP in the QTL. Bars are colored by the subpopulation assignment of the donor parent in orange (Admixed), purple (Asian), green (Central European), blue (Coastal Mediterranean), red (East African), and dark grey (Unassigned).<br>Figure S3 Annotations for flowering time QTL<br>
DOI: 10.25386/genetics.7757252.v1
title: Supplemental Material for Ollhoff et al., 2019 (in review)

description: Table S1. iSelect SNP physical positionsTable S2. Days after planting BLUPs for BRIDG6Table S3. SNP annotations for SNPs in HvPpd-H1 locus.Table S4. Effect of subsampling different numbers of families and lines from the BRIDG6 population on QTL detection for flowering time. Table S5. Flowering time related genes in barley<br><br>Figure S1 Distribution of average FST between the BRIDG6 parents and the NSGC accessions.<br>Figure S2 Distribution of allele effect estimates at all QTL for flowering time. The frequency of observations (Y-axis) are plotted at each allele effect relative to Rasmusson (X-axis). Estimates are the maximum allele effect per family for any significant SNP in the QTL. Bars are colored by the subpopulation assignment of the donor parent in orange (Admixed), purple (Asian), green (Central European), blue (Coastal Mediterranean), red (East African), and dark grey (Unassigned).<br>Figure S3 Annotations for flowering time QTL<br>
DOI: 10.25386/genetics.7757252.v2
title: Supplemental Material for Ollhoff et al., 2019

description: Table S1. iSelect SNP physical positionsTable S2. Days after planting BLUPs for BRIDG6Table S3. SNP annotations for SNPs in HvPpd-H1 locus.Table S4. Effect of subsampling different numbers of families and lines from the BRIDG6 population on QTL detection for flowering time. Table S5. Flowering time related genes in barley<br><br>Figure S1 Distribution of average FST between the BRIDG6 parents and the NSGC accessions.<br>Figure S2 Distribution of allele effect estimates at all QTL for flowering time. The frequency of observations (Y-axis) are plotted at each allele effect relative to Rasmusson (X-axis). Estimates are the maximum allele effect per family for any significant SNP in the QTL. Bars are colored by the subpopulation assignment of the donor parent in orange (Admixed), purple (Asian), green (Central European), blue (Coastal Mediterranean), red (East African), and dark grey (Unassigned).<br>Figure S3 Annotations for flowering time QTL<br>
DOI: 10.25387/g3.8980055.v1
title: Supplemental Material for Neyhart, Lorenz, Smith, 2019

description: Supplemental figures, tables, and associated captions to support the analysis in the manuscript "Multi-Trait Improvement by Predicting Genetic Correlations in Breeding Crosses"
DOI: 10.6084/m9.figshare.3761562.v1175
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.9119123
title: pat 13 MRI

description: Admire, Pinnacle, and Velocity denote structure sets after a deformable or rigid registration was applied to the MRI holding the CT as primary.
DOI: 10.25387/g3.8980055
title: Supplemental Material for Neyhart, Lorenz, Smith, 2019

description: Supplemental figures, tables, and associated captions to support the analysis in the manuscript "Multi-Trait Improvement by Predicting Genetic Correlations in Breeding Crosses"
DOI: 10.6084/m9.figshare.9119120
title: pat 13 CT

description: Admire, Pinnacle, and Velocity denote structure sets after a deformable or rigid registration was applied to the MRI holding the CT as primary.
DOI: 10.25375/uct.9125285.v1
title: Data from: New insights into population structure of the European golden eagle (Aquila chrysaetos) revealed by microsatellite analysis

description: This dataset is the foundation of the paper published in the Biological Journal of the Linnean Society with the title: "New insights into population structure of the European golden eagle (<i>Aquila chrysaetos</i>) revealed by microsatellite analysis."The dataset is in the commonly used STRUCTURE format and can be easily converted using software.<br> <br>Abstract:Connectivity between golden eagle (<i>Aquila chrysaetos</i>) populations is poorly understood. Field studies exploring the natal dispersal picture this raptor as a philopatric species, but with the ability to roam far. However little is known about the species’ population structure in Europe. Our study is based on 14 microsatellite loci and is complemented by novel and previously published mitochondrial control region DNA data. The present dataset includes 121 eagles from Scotland, Norway, Finland, Estonia, the Mediterranean and Alpine region. Our sampling focused on the Alpine and Mediterranean populations as both mtDNA lineages found in golden eagles – the Holarctic and the Mediterranean – are known to co-occur there. Cluster analyses of nuclear DNA support a shallow split into northern and southern populations in Europe, similar to the distribution of the two mtDNA lineages with the Holarctic one occurring in the north and the Mediterranean predominating in the south. Additionally, Scotland shows significant differentiation and low relative migration levels that indicate isolation from the mainland populations. Alpine and Mediterranean golden eagles do not show nuclear structure corresponding to divergent mtDNA lineages. This indicates that the presence of northern Holarctic mitochondrial haplotypes in the Alps and the Mediterranean is due to past admixture rather than recent long-distance dispersal. <br>
DOI: 10.6084/m9.figshare.3761562.v1176
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.25909/5d4138ff651b6
title: test-figshare.rtf

description: bjbjb
DOI: 10.25387/g3.9076991.v1
title: Supplemental Material for O'Connor et al., 2019

description: <b>Table S1</b> shows the genomes, taxonomy and download links for the 32 genomes used in the phylogenomic and CAZy studies. <br><b>Table S2</b> shows the presence of lignocellulolytic genes in the 32 fungal genomes. <b><br></b><b>Figure S1:</b> Macrosynteny between <i>A. bisporus</i> H97 chromosomes and all <i>A. bisporus</i> ARP23 scaffolds. Only regions larger than 10,000bp are connected with links. Macrosynteny visualised with Jupiter Plot.
DOI: 10.25386/genetics.8797874.v1
title: Supplemental Material for Shimizu et al., 2019

description: Tables S1 and S2<br>Figures S1~S8<br>
DOI: 10.25387/g3.9076991
title: Supplemental Material for O'Connor et al., 2019

description: <b>Table S1</b> shows the genomes, taxonomy and download links for the 32 genomes used in the phylogenomic and CAZy studies. <br><b>Table S2</b> shows the presence of lignocellulolytic genes in the 32 fungal genomes. <b><br></b><b>Figure S1:</b> Macrosynteny between <i>A. bisporus</i> H97 chromosomes and all <i>A. bisporus</i> ARP23 scaffolds. Only regions larger than 10,000bp are connected with links. Macrosynteny visualised with Jupiter Plot.
DOI: 10.25386/genetics.8797874
title: Supplemental Material for Shimizu et al., 2019

description: Tables S1 and S2<br>Figures S1~S8<br>
DOI: 10.5522/04/9137798
title: FireNet

description: FireNet <br> FireNet is an open ML training dataset for visual recognition of fire safety equipment. Our dataset directly links the objects to their respective Uniclass, the construction sector’s classification scheme to name objects. FireNet has been designed as a ML training dataset for experimentation and therefore fulfills multiple machine learning scenarios (classification, object detection, semantic segmentation). It is intended as a domain specific dataset to refine pre-trained standard architectures. <br>Uniclass & Description Pr_40_50_28_64 Portable fire extinguishers Pr_75_75_30_50 Manual call points Pr_40_50_28_29 Fire protective blankets Pr_40_10_77_32 Fire escape route signs Pr_40_10_77_31 Fire equipment signs Pr_75_75_30_97 Visual alarm signal devices Pr_75_75_30_30 Fire alarm sounders Pr_75_75_30_65 Point smoke detectors <br>
DOI: 10.6084/m9.figshare.3761562.v1177
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.3761562.v1178
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.15131/shef.data.7642523.v1
title: The impact of increasing tendon stiffness on the effectiveness of stretching interventions in children with cerebral palsy: A randomised controlled trial

description: Raw data of fascicle lengths and tendon stiffness corresponding to the paper: The impact of increasing tendon stiffness on the effectiveness of stretching interventions in children with cerebral palsy: A randomised controlled trial<br>
DOI: 10.6084/m9.figshare.9121982.v1
title: MSD_Analysis_MATLAB

description: Mean square displacements from single molecule SNAP-GLP-1R TIRF microscopy experiments following stimulation with vehicle or 100 nM of the pharmacological agonists exendin-4, exendin-phe1 or exendin-asp3 in CHO-K1 cells.
DOI: 10.6084/m9.figshare.9121988
title: MSD_Analysis_CSV

description: Mean square displacements from single molecule SNAP-GLP-1R TIRF microscopy experiments following stimulation with vehicle or 100 nM of the pharmacological agonists exendin-4, exendin-phe1 or exendin-asp3 in CHO-K1 cells.
DOI: 10.6084/m9.figshare.9121976
title: Trajectory_coordinates_MATLAB

description: Trajectory coordinates from single molecule SNAP-GLP-1R TIRF microscopy experiments following stimulation with vehicle or 100 nM of the pharmacological agonists exendin-4, exendin-phe1 or exendin-asp3 in CHO-K1 cells.
DOI: 10.6084/m9.figshare.9121988.v1
title: MSD_Analysis_CSV

description: Mean square displacements from single molecule SNAP-GLP-1R TIRF microscopy experiments following stimulation with vehicle or 100 nM of the pharmacological agonists exendin-4, exendin-phe1 or exendin-asp3 in CHO-K1 cells.
DOI: 10.6084/m9.figshare.9121982
title: MSD_Analysis_MATLAB

description: Mean square displacements from single molecule SNAP-GLP-1R TIRF microscopy experiments following stimulation with vehicle or 100 nM of the pharmacological agonists exendin-4, exendin-phe1 or exendin-asp3 in CHO-K1 cells.
DOI: 10.6084/m9.figshare.3761562.v1179
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.3761562.v1180
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.25387/g3.9159479.v1
title: Supplemental Material for Love et al., 2019

description: Supplementary figures S1-S4 and supplementary tables S1-S8 for "In silico karyotyping of chromosomally polymorphic malaria mosquitoes in the <i>Anopheles gambiae</i> complex"<br>
DOI: 10.25387/g3.9159479
title: Supplemental Material for Love et al., 2019

description: Supplementary figures S1-S4 and supplementary tables S1-S8 for "In silico karyotyping of chromosomally polymorphic malaria mosquitoes in the <i>Anopheles gambiae</i> complex"<br>
DOI: 10.6084/m9.figshare.3761562.v1183
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.9121877.v2
title: data.zip

description: Matlab (.mat) files for figures in the paper
DOI: 10.25387/g3.9255608
title: Supplemental Material for Jani and Azad, 2019

description: Supplementary Tables
DOI: 10.25387/g3.9255608.v1
title: Supplemental Material for Jani and Azad, 2019

description: Supplementary Tables
DOI: 10.6084/m9.figshare.3761562.v1184
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.9275378
title: FORWINDv01 - A spatially-explicit database of wind disturbances in European forests over the period 2000-2018

description: FORWIND comprises more than 80,000 spatially delineated areas in Europe that were disturbed by wind in the period 2000-2018, and describes them in a harmonized and consistent geographical vector format.
DOI: 10.6084/m9.figshare.9275378.v1
title: FORWINDv01 - A spatially-explicit database of wind disturbances in European forests over the period 2000-2018

description: FORWIND comprises more than 80,000 spatially delineated areas in Europe that were disturbed by wind in the period 2000-2018, and describes them in a harmonized and consistent geographical vector format.