cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28514015.v1
title: Pancreatic cancer histopathology/spatial transcriptomics data from Zhou et al.

description: This dataset contains the h5ad files for the 13 samples with histopathology and spatial transcriptomics features.Each h5ad contains the following information necessary for running with the SpatialDIVA model:Raw ST counts per spot in the .X attribute of the anndata objectHistopathology features extracted via the UNI foundation model (https://www.nature.com/articles/s41591-024-02857-3), stored in .obs columns beginning with "UNI". These features are also on a per-spot level.Spatial coordinates for each spot stored in .obsm["spatial"]Pathologist annotations on a per-spot level stored in .obs["is_tumor"]The most prevalent cell-type per spot stored in .obs["ST_celltype"]Raw de-convolution results for ST cell-types in various .obs columns ending with the cell-type namesThe original data with the ST transcriptomic counts and histopathology - https://www.nature.com/articles/s41588-022-01157-1. We reannotated the dataset for both the ST-celltype annotations and pathologist annotations - details are outlined in the preprint https://www.biorxiv.org/content/10.1101/2025.02.19.638201v1.
DOI: 10.17632/xtdyddwprz
title: Leader-follower (in)congruence in leader's transformational leadership and team performance: Evidence from sales teams in China

description: This dataset includes data on transformational leadership from both leaders (self-rating) and team members nested in 88 sales teams in China. The outcome variable - team service performance along with control variables are included in it too.
DOI: 10.6084/m9.figshare.23735643.v3
title: Supplementary Material for: Underwater endoscopic mucosal resection for a terminal ileum adenoma

description: Tumors of the terminal ileum are rare, and their diagnosis and treatment standards have not been established. The effectiveness of underwater endoscopic mucosal resection (UEMR) in the duodenum and colon has been reported; however, its effectiveness in the small intestine is rarely reported. We present a case of an ileum adenoma diagnosed using magnifying endoscopy that was completely resected using UEMR. A 56-year-old woman with a lesion in the terminal ileum was referred to our hospital for treatment. Colonoscopy revealed a 10- mm slightly depressed lesion with marginal elevation in the terminal ileum. Magnifying narrow-band imaging (NBI) showed a tubular surface pattern with regular vessels on the slightly elevated marginal area and regular brown vessels on the slightly depressed central area. Magnifying chromoendoscopy using crystal violet staining showed a branch-like or gyrus-like pattern on the marginal area, and a roundish and tubular structure on the central area. The lesion was diagnosed as an adenoma in the terminal ileum, similar to a colonic adenoma; hence, we decided to perform UEMR. The lesion was completely removed using a 10- mm snare. The pathological diagnosis revealed that it was an intestinal-type adenoma with negative margins. At the margins of the lesions, the tumor tended to form a villous structure, while the center appeared tubular with a relatively flat surface. These histopathological findings were consistent with the magnifying endoscopic findings. UEMR for terminal ileum tumors may be effective in their treatment.
DOI: 10.6084/m9.figshare.5121700.v1
title: Supplementary Material for: Type 2 Diabetes and Late-Onset Alzheimer’s Disease

description: <i>Background/Aims:</i> To confirm in a cohort recruited in 1999–2001 our finding in a cohort recruited in 1992–1994 relating type 2 diabetes (T2D) to late-onset Alzheimer’s disease (LOAD). <i>Methods:</i> Participants were 1,488 persons aged 65 years and older without dementia at baseline from New York City. T2D was ascertained by self-report. Dementia and LOAD were ascertained by standard research procedures. Proportional hazard regression was used for analyses relating T2D and LOAD. <i>Results:</i> The prevalence of T2D was 17%. There were 161 cases of dementia and 149 cases of LOAD. T2D was related to dementia (hazard ratio = 1.7; 95% confidence interval = 1.4–2.9) and LOAD (1.6; 1.0–2.6) after adjustment for age, sex, education, ethnic group and apolipoprotein E Ε4. This association was weaker when only AD – excluding cases of mixed dementia – was considered (hazard ratio = 1.3; 95% confidence interval = 0.8–2.2). <i>Conclusion: </i>T2D is associated with LOAD. Cerebrovascular disease may be an important mediator.
DOI: 10.25402/fsg.22770626.v1
title: Kosakonia radicincitans with hypervirulent lON genes causes human bloodstream infections - supplementary - materials

description: Kosakonia radicincitans is a species within the new genus Kosakonia, which is typically a plant pathogen,
with rare reports of human infection. The number of human infections may be underestimated
because this new genus is under-represented among diagnostic tools. This report describes a case of
bloodstream infection caused by K. radicincitans. The pathogen was identified by matrix-assisted laser
desorption/ionization-TOF mass spectrometry and 16S rRNA gene sequencing. The hypervirulent human
pathogenicity gene LON, which has not been described before, was detected in the bacterial genome by
gene annotation. Thus, this discovery provides a new reference for studying the pathogenic mechanism
of this rare pathogen.
DOI: 10.6084/m9.figshare.26381392.v1
title: MS data of SMG analysis for WT, Hs3st1 KO, Hs3st3a1 KO, Hs3st3b1 KO, WT and DKO- samples from male SMGs.zip

description: Specific 3-O-sulfated heparan sulfate domains regulate salivary gland basement membrane metabolism and epithelial differentiation
DOI: 10.6084/m9.figshare.5123908.v1
title: Supplementary Material for: Tissue Plasminogen Activator-Assisted Vitrectomy for Ruptured Eye with Suprachoroidal Hemorrhage

description: <b><i>Purpose:</i></b> To report a case of a ruptured eye with a suprachoroidal hemorrhage (SCH) in which tissue plasminogen activator (tPA)-assisted vitrectomy was successful in reconstructing the globe and restoring good vision. <b><i>Case:</i></b> A 32-year-old man was struck on the right eye by a surfboard. His eye was ruptured and his visual acuity decreased to hand movements. Surgery was immediately performed to successfully close the ruptured globe. Nine days later, a second surgery was performed, and tPA (25 µg/0.1 ml monteplase) was used to liquefy and drain the SCH. This freed enough vitreous space for a more comprehensive vitrectomy. Eighteen months after the injury, the retina remained attached, and the decimal best-corrected visual acuity improved to 0.8. <b><i>Conclusion:</i></b> tPA was helpful in lysing a massive SCH, thereby contributing to the excellent visual outcome. tPA-assisted drainage should be considered in cases of massive SCH when drainage is difficult due to an incomplete lysis of the clot.
DOI: 10.6084/m9.figshare.27228759.v1
title: Midgaard Glacier and Glacier de France catchments evolution 1933-2022

description: Catchment configuration: distribution of basins and their contributions to the Midgaard Glacier outlet or Kattilersopia outlet.
DOI: 10.6084/m9.figshare.29145311.v1
title: Meretrix genome annotations

description: Gene prediction and functional annotation for three <i>Meretrix </i>species, <i>Meretrix </i>sp. MF1, <i>Meretrix </i>sp. MT1, and <i>M</i>. <i>lamarckii</i> JML1.Gene prediction for <i>Meretrix </i>sp. MF1 was performed using BRAKER version 3.0.8, Transposable elements (TEs) were then masked using TEsorter version 1.2.7.Functional annotation was conducted using EggNOG-mapper version 2.1.12 and and InterProScan version 5.73-104.0.
DOI: 10.6084/m9.figshare.3420901.v2
title: Delayed administration of TAT.ARC protein attenuates focal ischemic brain injury and fosters recovery in the long-term: behavioral data of neuroscores and rota rod tests, daily temperature and body weight measures

description: Mice were subjected to 30 min MCAo or sham surgery and TAT.b-Gal or TAT.ARC were administered in the contralateral ventricle after 3h after the onset of ischemia and mice were observed over 28 days. DeSimoni Neuroscore was performed at indicated time points (Fig. 8) as described (De Simoni et al., 2003; Orsini et al., 2012) with some modifications. In brief, general health (Table 2) and specific focal assessments (Table 3) were separately scored, analyzed and finally added to form a summation score. Summative scores added up to a maximum of 43 points with more points meaning more deficits. Rota rod was assessed as described recently (Hoffmann et al., 2015) and the best run out of three replicates at a given time point was used for statistical analysis. Body temperature was measured daily as survival was documented. Body temperature was non-invasively assessed at the same time of the day prior to body weight measurements using subcutaneous transponders (IPTT-300, Bio Medic Data Systems), for unambiguous identification of mice in their home cages as described (Kort et al., 1998; Langer and Fietz, 2014).
DOI: 10.6084/m9.figshare.5545069.v1
title: Foam Core Study Data

description: Data obtained from the ABAQUS model when comparing changes in the foam core dimensions of the FRP sandwich panel.
DOI: 10.6084/m9.figshare.8038448.v1
title: ESI-MS and GC-MS raw data

description: ESI-MS and GC-MS raw data
DOI: 10.17632/tszcy9wczj
title: George Loxley Manuscript raw data

description: Raw data for manuscript "Long-term Interleukin-4 release from 3D printable affinity hydrogels promotes M2-like macrophage polarisation in vitro
DOI: 10.17632/w86w9yn572
title: Simulation Ontology & Parser

description: - Simulation Ontology for Discrete-Event, Agent-Based and System Dynamics modeling - Parsing script for automated model generation (.alp) from instantiated Simulation Ontology (.csv)
DOI: 10.6084/m9.figshare.1276393.v2
title: Diffusion images of rabbit hemibrain radiation injury

description: Multiple shells diffusion data of rabbit hemibrain radiation injury model
DOI: 10.6084/m9.figshare.21608385.v1
title: Assembly of an ancient peach genome reveals the mechanism of blood flesh formation and forward shift in fruit maturity date

description: <strong>Peach (</strong><em><strong>Prunus persica</strong></em><strong>) landraces have typical regional characteristics, strong environmental adaptability and contain many valuable genes that provide the foundation for breeding excellent varieties. Therefore, it is necessary to assemble the genomes of specific landraces to facilitate the localization and utilization of these genes. </strong>
DOI: 10.6084/m9.figshare.21919176.v1
title: Cuticular profiling raw data

description: Raw dataset for Cuticular profiling of insecticide resistant <em>Aedes aegypti</em>
DOI: 10.6084/m9.figshare.23301377.v1
title: Heeringa_etal_2023b_CVCs_Aging

description: This dataset belongs to the manuscript entitled: "<b>Altered neural encoding of vowels in noise does not affect behavioral vowel discrimination in gerbils with age-related hearing loss</b>" by Amarins Heeringa, Carolin Jüchter, Rainer Beutelmann, Georg Klump, and Christine Köppl from the University of Oldenburg. Published in Frontiers of Neuroscience (doi: 10.3389/fnins.2023.1238941). Each tab shows the data for the accompanying figures.
DOI: 10.6084/m9.figshare.27207999.v1
title: Atmospheric Methane Growth Rate in 2020 and 2021

description: 1. INVs.tar.gz – The global gridded surface methane fluxes (2019–2021) inferred from an ensemble of six atmospheric inversions by PYVAR-LMDZ-SACS, each using a combination of three different methane concentration observation datasets for constraints (SURF, GSNIES and GSUoL) and two physical parameterisations for the transport model LMDZ (LMDZ AR3 version and LMDZ AR6 version).2. LMDZ-INCA_OH.tar.gz – The prescribed OH and O(<sup>1</sup>D) fields (2019–2021) used in atmospheric inversions, which were simulated by a chemistry-climate model LMDZ-INCA with a full tropospheric photochemistry scheme.3. ANTHROP_EMIS_2019-2021.nc – The global gridded anthropogenic methane emissions (2019–2021) compiled from a combination of existing inventories.4. WEMs.tar.gz – The global wetland methane emissions (2015–2021) simulated by two process-based wetland emission models (WEMs) ORCHIDEE-MICT and LPJ-wsl, forced by four climate forcing datasets (CRU, ERA5, MERRA2 and MSWEP). For ORCHIDEE-MICT in particular, two wetland maps (RFW and GIEMS-2) were used to calibrate the parameters in simulating the wetland area dynamics. Combining two wetland maps for ORCHIDEE-MICT and one for LPJ with four climate datasets, a total of 12 simulations of wetland methane emissions were included in our analyses.For more information, please refer to Lin et al. Recent methane surges reveal heightened emissions from tropical inundated areas.
DOI: 10.6084/m9.figshare.14171255.v1
title: Exploration of Characteristic Temperature Contributions to Metallic Glass Forming Ability

description: Research for machine learning on the liquidus, onset to crystallization, and glass transition temperatures to determine the critical casting diameter for 747 compositions.
DOI: 10.6084/m9.figshare.25188020.v1
title: <b>Differences in phenology across three trophic levels between two Afrotropical sites separated by four degrees latitude</b>

description: Datasets supporting article 'Differences in phenology across three trophic levels between two Afrotropical sites separated by four degrees latitude'.See README.txt file for metadata and description.
DOI: 10.17632/jdx7tddcxz
title: Celeris Base: An interactive and immersive Boussinesq-type nearshore wave simulation software

description: We introduce our interactive and immersive coastal wave simulation software, Celeris Base, which is the successor to Celeris Advent. Celeris Base is an open source software developed in the Unity3D game engine and in C# language. It supports an interactive environment and allows users to view the simulations in a virtual reality headset. Celeris Base solves the same equations as Celeris Advent, the extended Boussinesq equations, using our hybrid finite volume–finite difference method. These equations are solved on the GPU using compute shaders, written in HLSL. Celeris Base has several new features such as 360°video capturing, geographic map overlays, built-in real-time gauge plotters, etc. It also improves the implementation of the sponge layer boundary condition by introducing new damping equations. Celeris Base is designed and implemented using the best software engineering practices in the hope that it will be a base for further developments of the Celeris software series by researchers around the globe. We validate Celeris Base against experimental results in this paper.
DOI: 10.6084/m9.figshare.12328232.v1
title: GSEA_CellTypes_Cryptosporidium_Infection.xlsx

description: <b>Hallmark pathways from the molecular signature database (MSigDB) enriched in <i>C. parvum</i> infected mini-guts compared to control tissues, as estimated from gene set enrichment analysis (GSEA). </b>Source data behind Extended Data Figure 9f and Supplementary Figure 3.
DOI: 10.6084/m9.figshare.19682247.v2
title: Supplementary Material 5

description: Supplementary Material 5
DOI: 10.6084/m9.figshare.21970604.v7
title: IDCIA Dataset

description: The provided dataset has two directories: 𝐼𝑚𝑎𝑔𝑒𝑠 and 𝑔𝑟𝑜𝑢𝑛𝑑_𝑡𝑟𝑢𝑡ℎ, and the <em>readme.md</em> file for the description of the dataset folder. The 𝐼𝑚𝑎𝑔𝑒𝑠 directory contains seven sub-directories, one for each of the primary antibody used in the experiments. Inside each directory are grayscale images from fluorescence microscopy. The images were resized to 800𝑥600 pixels. <br> The Source codes used for baseline experiments can be found at https://github.com/abdumhmd/IDCIA
DOI: 10.6084/m9.figshare.6109430.v1
title: Additional file 2: of Expression levels of long non-coding RNAs are prognostic for AML outcome

description: List of lncRNAs. Description of data: A list of lncRNAs selected using random-forest method. (XLSX 5 kb)
DOI: 10.17632/8jmkwc45tt
title: Data for: Locate vaccination stations with travel distance, operational costs and work schedule considered

description: The data file includes full data used in the case study of the paper.
DOI: 10.17632/hzg8f3cj4h
title: Data for: Role of Peri- and Postoperative Antibiotics in Microscopic Laryngeal Surgery

description: Data to supplement Role of Peri- and Postoperative Antibiotics in Microscopic Laryngeal Surgery
DOI: 10.6084/m9.figshare.23705712.v1
title: OOD-GrainSet (wheat)

description: OOD-GrainSet-wheat for ECAI2023 (Identifying the Defective: Detecting Damaged Grains for Cereal Appearance Inspection) including 180K single-kernel images - 135K healthy kernel images - 45K images containing six types of damaged kernels and impurities, each type has 4k
DOI: 10.6084/m9.figshare.25567314.v1
title: The experimental data of the manuscript entitled “Journal of Informetrics 2007-2023: A retrospective bibliometric analysis”.

description: This is the experimental data of the manuscript entitled “Journal of Informetrics 2007-2023: A retrospective bibliometric analysis”. It contains one set of raw data and three splits of the data by periods.
DOI: 10.6084/m9.figshare.12751652.v1
title: Transcript for Focus group discussion for Focus Group Paper for Tonga

description: The data consists of three semi-structured focus groups (n=16) which were conducted at Tonga’s only Public Hospital located in the capital, Nuku’alofa. Discussions were audio recorded, transcribed, cross-checked for consistency and entered into a word processing document for further scrutiny. In any phenomenological study the researcher’s objective is to elicit the participant’s views on their lived experiences.
DOI: 10.6084/m9.figshare.21647882.v1
title: Financial reporting quality of ESG firms listed in China

description: Dataset relates to the journal paper titled: Financial reporting quality of ESG firms listed in China. Insights into determinants. Published in <em>PLoS ONE</em>.
DOI: 10.6084/m9.figshare.27018211.v1
title: NIBAS Project data files

description: NIBAS
DOI: 10.6084/m9.figshare.5841846.v5
title: Nevsky prospect traffic surveillance video

description: The data set contains traffic surveillance video in the area of Nevsky prospect(central street of Saint Petersburg) between the Moika river and the street Bolshaya Konuyshennaya. The covered area contains two-way road with dense vehicle movement. The length of the selected area is 102 meters, width is 17.5 meters. The resolution of each video is 960x720 pixels. The dataset was colected in November 2017, December 2017 and January 2018.<br><br>7 days in April 2017 are placed here:<br>https://figshare.com/articles/St_Petersburg_traffic_videos/5439706<br>
DOI: 10.17632/74jyyv2542
title: Climate Watch Historical Country Greenhouse Gas Emissions Data (1990-2018)

description: Date Of Content: 1990-2018 Source Organization: World Resources Institute Summary: Historical country-level and sectoral GHG emission data (1990-2018) Description: Climate Watch Historical Emission data contains sector-level greenhouse gas (GHG) emissions data for 194 countries and the European Union (EU) for the period 1990-2018, including emissions of the six major GHGs from most major sources and sinks. Non-CO2 emissions are expressed in CO2 equivalents using 100-year global warming potential values from IPCC Fourth Assessment Report. See http://cait.wri.org/docs/CAIT2.0_CountryGHG_Methods.pdf for details regarding data source and methodology. Geographic Coverage: Global Cautions: Climate Watch Historical GHG Emissions data (previously published through CAIT Climate Data Explorer) are derived from several sources. Any use of the Land-Use Change and Forestry or Agriculture indicator should be cited as FAO 2020, FAOSTAT Emissions Database. Any use of CO2 emissions from fuel combustion data should be cited as CO2 Emissions from Fuel Combustion, OECD/IEA, 2020. As of March 2020, emissions from European Union (27) for all years no longer include emissions from United Kingdom on Climate Watch. Read More: https://www.climatewatchdata.org/ghg-emissions Summary Of Licenses: Creative Commons Attribution-NonCommercial 4.0 International license Citation: Climate Watch Historical GHG Emissions. 2021. Washington, DC: World Resources Institute. Available online at: https://www.climatewatchdata.org/ghg-emissions Terms Of Service Link: https://creativecommons.org/licenses/by/4.0/
DOI: 10.17632/74vn7ffcr5
title: Heritability and pre-adult survivorship costs of ectoparasite resistance in the naturally occurring Drosophila-Gamasodes mite system

description: Dataset contains 7 excel files with data from experiments reported in this publication.
DOI: 10.17632/cgsntkkdx4
title: The Framework of Electronic-Based Government System (SPBE) Architecture in The Scope of Data and Information to Support Satu Data Indonesia in The Tourism Sector

description: This data is the result of processed mapping of tourism sector data indicators on the Electronic-Based Government System Architecture which has been processed in the form of images and excel files.
DOI: 10.17632/rgrg58szs6
title: UNCOVER-3 5 Year Efficacy and Safety Manuscript Supplemental Materials

description: Supplemental materials for "Long-term efficacy and safety of ixekizumab: 5-year analysis of the UNCOVER-3 randomized controlled trial" (JAAD-D-20-01565)
DOI: 10.6084/m9.figshare.20388357.v4
title: obi_miRNA

description: The data were generated from RNA-seq of three females and three males gonads in <em>Opsariichthys bidens</em>. The data consists of six parts, namely, clean reads statistics, miRNA annotation, miRNA expression, differentially expressed miRNA target perdiction and GO&KEGG analysis.
DOI: 10.6084/m9.figshare.25047296.v1
title: Comparison data for freshwater snails hosts of bilharzia and liver flukes collected by citizen scientists and an expert in the Lake Albert region of Uganda

description: This data was generated in the ATRAP (<b>A</b>ction <b>T</b>owards <b>R</b>educing <b>A</b>quatic Snail-borne <b>P</b>arasitic diseases) project in western Uganda. ATRAP employed a novel citizen science project in monitoring snail intermediate hosts of <i>Schistosoma </i>and <i>Fasciola </i>flukes that affect human and livestock health. Twenty-five citizen scientists monitored over 76 sites and reported weekly data on snail presence and human activities at the sites. To validate the quality of weekly data collected by citizens, an expert scientist monitored monthly the same sites using the same protocol used by the citizens.This dataset is a subset of the data consisting of matched data per site not more than seven days apart between the expert and citizen sampling. This data was used for analysis in the comparison of data quality of the citizen scientists using expert data as a yardstick.
DOI: 10.17632/9gkv3dpkgw
title: data_shopee

description: This dataset is the result of webscripping using google play scaper using python programming language which contains 12000 shopee review data taken from the google play store.
DOI: 10.17632/mgm78ddy5y
title: Dataset about SBM from 1983-2023

description: The data includes 2 files: 1 file saved as .csv is the research loaded from Scopus database, 1 file is the results extracted from VOS viewer
DOI: 10.17632/4h3dn8b728
title: Musculoskeletal pain among Bangladeshi desk-based officials 

description: Musculoskeletal (MS) pain is widely prevalent and a significant health issue for desk-based employees, which negatively impacts both personal and work life. Data were collected between November 2020 to March 2021.
DOI: 10.17632/78yjyp53gk
title: Data for: Complex body size differences in thermal tolerance among army ant workers (Eciton burchellii parvispinum)

description: Data for analysis of worker sub-caste differences in critical thermal limits in Eciton burchellii parvispinum army ants.
DOI: 10.17632/b7s2bx8pwv
title: Dataset for : Impact study of the wastewater treatment plant effluents on fluorescence of coastal zone water using fluorescence EEM-PARAFAC.

description: Data for the article entitled as above.