cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3376509
title: Sleep problems are a strong predictor of stress-related metabolic changes in police officers. A prospective study

description: Data used for a prospective study on occupational stress, sleep problems and metabolic syndrome in a sample of police officers, Italy, 2009-2014. Paper submitted to PLoS One, waiting for a decision.
description: Paper submitted to PLoS One, waiting for a decision
DOI: 10.5281/zenodo.4735592
title: Output data for "Deep learned process parameterizations provide better representations of turbulent heat fluxes in hydrologic models"

description: This contains all of the processed/merged output from the simulations for the paper "Deep learned process parameterizations provide better representations of turbulent heat fluxes in hydrologic models", submitted to WRR.
DOI: 10.5281/zenodo.6395340
title: Malaria Prevalence in Commune 5 in Tumaco (Nariño, Colombia)

description: This project contains the following underlying data: Malaria Prevalence in Commune 5 in Tumaco - persons, dataset Malaria Prevalence in Commune 5 in Tumaco - persons - readme, codebook Malaria Prevalence in Commune 5 in Tumaco - house, dataset Malaria Prevalence in Commune 5 in Tumaco - house - readme, codebook Breeding sites Determination Anopheles Housing survey People survey
description: This study was funded by Minciencias. "Malaria Elimination: A Challenge for Colombia" Project. Code: 622177757170.
DOI: 10.5281/zenodo.6480165
title: Training and validation datasets for "Three-Dimensional Implicit Structural Modeling Using Convolutional Neural Network"

description: This is training and validation datasets used in manuscript "Three-Dimensional Implicit Structural Modeling Using Convolutional Neural Network". In this manuscript, we propose an efficient deep learning method using a Convolutional Neural Network (CNN) to predict a scalar field from sparse structural data associated with multiple distinct stratigraphic layers and faults. The CNN architecture is beneficial for the flexible incorporation of empirical geological knowledge when trained with numerous and realistic structural models that are automatically generated from a data simulation workflow. It also presents an expressive characteristic of integrating various types of structural constraints by optimally minimizing a hybrid loss function to compare predicted and reference structural models, opening new opportunities for further improving geological modeling.
DOI: 10.6084/m9.figshare.20346696.v1
title: 20151023 ND7 5 3D FI-DE+ 0.04pA Ar1500 0.48nA FG ON 015_0.ita

description: 25 keV Bi3+ imaging probe in Burst Alignment-Delayed Exxtraction mode, analysis file, ION-TOF5.
DOI: 10.6084/m9.figshare.21069244
title: Supplementary Material for: Understanding the Association between Alcohol Stigma and Alcohol Consumption within Europe: A Cross-Sectional Exploratory Study

description: <b><i>Introduction:</i></b> Stigma towards alcohol-related conditions is more pronounced than stigma against any other mental illness and has remained high throughout past decades. Although alcohol consumption is a known and persistent contributor to the burden of disease and interpersonal threat and may thus shape public attitudes towards consumption, no study to date has provided an overview of the prevalence of alcohol stigma and its association with (a) alcohol consumption and (b) harm attributable to alcohol across Europe. As a social reaction to thresholds of accepted use of alcohol, stigma could impact consumption, resulting in a reduced quantity or at least less harmful drinking patterns. This contribution provides an initial overview by addressing the following research questions. (i) What are the country-level prevalence rates of alcohol stigma compared across European countries? (ii) Is alcohol stigma associated with (a) alcohol consumption and (b) alcohol-attributable harm? (iii) Is there an association between alcohol stigma and alcohol consumption by type of beverage? <b><i>Methods:</i></b> We combined data on country-level desire for social distance towards “heavy drinkers” (European Values Survey, operationalization of “alcohol stigma”) with indicators of alcohol consumption, including adult per capita consumption (APC), heavy episodic drinking, consumption by type of beverage (wine, beer, spirits), and harm attributable to alcohol, namely age-standardized disability-adjusted life years lost to alcohol consumption (AADALYs) for 28 countries. Linear regression models were applied<i>.</i> <b><i>Results:</i></b> (i) Social distance varied noticeably across countries (M = 62.9%, SD = 16.3%) in a range of 28.3% and 87.3%. (ii) APC was significantly positive related to social distance (β = 0.55, <i>p</i> = 0.004). (iii) Wine consumption was significantly negative related to social distance; the opposite was true for spirits consumption. No association was found for beer consumption<i>.</i> The best model fit was achieved with APC (β = 0.48, <i>p</i> = 0.002) and wine per capita consumption (β = −0.55, <i>p</i> &lt; 0.001) explaining 57.0% (adjusted <i>R</i><sup>2</sup>) of the variance in social distance. <b><i>Conclusion:</i></b> Our study shows a strong relationship between country-level alcohol stigma and alcohol consumption. If stigma was to deter people from harmful alcohol consumption, it would be expected that higher levels of alcohol stigma are associated with lower levels of overall alcohol consumption or consumption of spirits in particular. Instead, stigma seems to be a reaction to harmful drinking patterns without changing these patterns for the better.
DOI: 10.6084/m9.figshare.21069763
title: Supplementary Material for: Meta-Analysis of the Use of Head Impulse Test and Head Impulse Test with Direction Changing Nystagmus and Test of Skew Deviation in the Diagnosis of Peripheral Vertigo and Stroke

description: <b><i>Introduction:</i></b> The head impulse test (HIT) and HIT combined with direction-changing Nystagmus-Test of Skew deviation (HINTS) have been proposed as bedside tests to differentiate between peripheral and central causes of vertigo in the emergency department (ED). We conducted a meta-analysis of the HIT and HINTS tests to diagnose peripheral vertigo (PV) and central vertigo. <b><i>Methods:</i></b> Pubmed, Google Scholar, EmBase, and articles references published in English up to July 2021 were searched for keywords “vertigo” or “acute vestibular syndrome” or “dizziness” and “head impulse” and “stroke.” The bivariate method for meta-analysis was used to calculate positive (PLR) and negative likelihood ratios (NLR) and summary receiver operating characteristics area under the curve (AUC). <b><i>Results:</i></b> A total of 11 studies were included analysing both HIT (8 studies, <i>N</i> = 417) and HINTS (6 studies, <i>N</i> = 405). HIT and HINTS were performed within 24 h in 4 of 11 studies. PLR and NLR for HIT in PV was 4.85 (95% CI: 2.83–8.08) and 0.19 (95% CI: 0.12–0.29, <i>I</i><sup>2</sup> 63.25%), respectively. The AUC for HIT the diagnosis of PV and stroke was 0.90 and 0.92, respectively. PLR and NLR for a negative HIT in stroke was 5.85 (95% CI: 3.07–10.6) and 0.17 (95% CI: 0.08–0.30), respectively. PLR and NLR for peripheral HINTS pattern for PV was 17.3 (95% CI: 8.38–32.1) and 0.15 (95% CI: 0.07–0.26), respectively. PLR and NLR for central HINTS pattern for stroke: 5.61 (95% CI: 4.19–7.7) and 0.06 (95% CI: 0.03–0.12). In all included studies, HIT and HINTS exams were administered by neurology residents or neurology specialists with additional neuro-otology or neuro-ophthalmology subspeciality experience, and two studies included ED physicians. Raters reported high degree of bias and high concern regarding applicability in most domains of the quality assessment of diagnostic accuracy studies (QUADAS-2) tool. Meta-regression did not demonstrate a statistically significant effect of publication year, time to test, and type of assessor on sensitivity or false positive rate. <b><i>Conclusion:</i></b> The HIT and HINTS exams appear to be moderately good discriminators of central and PV. However, in most papers, the tests were administered by neurologists and were evaluated beyond 24 h, which may limit utility in the ED setting.
DOI: 10.15129/f3f92bdb-5b8e-4f4e-96b0-b377a9d1ea5e
title: Data for: "Ratiometric analysis using Raman spectroscopy as a powerful predictor of structural properties of fatty acids"

description: This data was generated for the publication of a research article with the same title and analyses fatty acids using Raman spectroscopy to determine key peak ratios to allow prediction of fatty acid saturation and chain length and uses the model (compared with a multivariate model) to measure these characteristics in food oil samples. Raman data was taken using a Renishaw inVia system with Renishaw Wire 4.1 software and is provided in .wdf format and .spc format as raw data. MATLAB scripts used to carry out data processing are provided.
DOI: 10.5281/zenodo.5552171
title: Dataset - Radially resolved dynamic inflow pitch step experiment in wind tunnel

description: The relevant turbine data of MoWiTO 1.8 and the preprocessed data presented in the following accepted paper are uploaded: <br> Berger, F., Onnen, D., Schepers, J. G., and Kühn, M.: Experimental analysis of radially resolved dynamic inflow effects due to pitch steps, Wind Energ. Sci. Discuss. [preprint], https://doi.org/10.5194/wes-2021-70, accepted, 2021. The dataset describes a pitch step experiment with a model wind turbine in a wind tunnel between a high rotor load and a low rotor load. Measurements of turbine loads, near wake flow and radius resolved induction measurements are available.
DOI: 10.5281/zenodo.7007934
title: Dataset - Experimental analysis of the dynamic inflow effect due to coherent gusts

description: Here the processed experimental data of the accepted paper given below is documented and made available: Berger, F., Neuhaus, L., Onnen, D., Hölling, M., Schepers, G., and Kühn, M.: Experimental analysis of the dynamic inflow effect due to coherent gusts, Wind Energ. Sci. Discuss. [preprint], https://doi.org/10.5194/wes-2022-2, accepted, 2022.
DOI: 10.6084/m9.figshare.20346726.v1
title: 20140814 Dicty Stream #2 ROI E6 Bi3 Primary + mode 020 0.11pA PII_0.ita

description: 25 keV Bi3+ imaging probe at 40 micron FOV, analysis file, TOF-SIMS 5.
DOI: 10.6084/m9.figshare.20346690.v1
title: 20140814 Dicty Stream #2 ROI E6 Bi3 Primary + mode 019 0.11pA PI.itm

description: 25 keV Bi3+ imaging probe at 120 micron FOV, measurement file, TOF-SIMS 5.
DOI: 10.6084/m9.figshare.20346705.v1
title: 20150124 DictyPT2 S4 Bi3+ SM+FGON 0.21pA 3scans FOV 200 007_0.ita

description: 25 keV Bi3+ HCBU mode, analysis file, TOF-SIMS 5.
DOI: 10.6084/m9.figshare.20346717.v1
title: 20140814 Dicty Stream #2 ROI E6 Bi3 Primary + mode 019 0.11pA PI_0.ita

description: 25 keV Bi3+ imaging probe at 120 micron FOV, measurement file, TOF-SIMS 5.
DOI: 10.6084/m9.figshare.20346741.v1
title: 20151023 ND7 5 3D FI-DE+ 0.04pA Ar1500 0.48nA FG ON 015.itm

description: 25 keV Bi3+ imaging probe in Burst Alignment-Delayed Exxtraction mode measurement data, ION-TOF5.
DOI: 10.5255/ukda-sn-6712-4
title: Workplace Employment Relations Survey: 1998-2011: Secure Access
DOI: 10.5281/zenodo.6656525
title: Sharkipedia: A Curated Open Access Database of Shark and Ray Life History Traits and Abundance Time-series

description: This dataset represent the intial launch of Sharkipedia: a curated open access database of shark and ray life history traits and abundance time-series. A curated database of shark and ray biological data is increasingly necessary both to support fisheries management and conservation efforts, and to test the generality of hypotheses of vertebrate macroecology and macroevolution. Sharks and rays are one of the most charismatic, evolutionary distinct, and threatened lineages of vertebrates, comprising around 1,250 species. To accelerate shark and ray conservation and science, we developed Sharkipedia as a curated open-source database and research initiative to make all published biological traits and population trends accessible to everyone. Sharkipedia hosts information on 58 life history traits from 264 sources, for 170 species, from 39 families, and 12 orders related to length (n=9 traits), age (8), growth (12), reproduction (19), demography (5), and allometric relationships (5), as well as 871 population time-series from 202 species. Sharkipedia relies on the backbone taxonomy of the IUCN Red List and the bibliography of Shark-References. Sharkipedia has profound potential to support the rapidly growing data demands of fisheries management, international trade regulation as well as anchoring vertebrate macroecology and macroevolution.
DOI: 10.15129/e840bd2a-6597-4e64-8656-e6eeedf3bc3d
title: The Challenges Facing Pasar Accountability

description: The dataset contains feedback from Merchants and Customers about the quality of service provided by indigenous markets of Indonesia, pasar. Data embargo until 31 December 2025
DOI: 10.17043/palmtag-2022-pedon-1
title: Detailed pedon data on soil carbon and nitrogen for the northern permafrost region
DOI: 10.17632/g6zmthh6w5.2
title: Significant contribution of seamounts to the oceanic rare earth elements budget

description: The rare earth elements (REEs) are a crucial resource and frequently used as proxies for reconstructing paleomarine environmental conditions. However, many details concerning the marine REE cycling, including relationship between benthic diffusion of REEs and seamounts, remain unclear. Here we present REE and trace elements data of porewater and seawater from the seamounts area and abyssal plain, respectively. Our results evidence that dissolved porewater REE, Mn and Al in sediments near seamount are much higher than those at abyssal plain, which lead to a substantial benthic source of REE to ocean at regions with seamounts. The REE enrichment processes in porewater at uneven seafloor are mainly based on re-suspension associated with the strong currents and/ or partial dissolution of detrital from seamounts. We suspect this process to occur in other world regions with seamounts and infer that these sediments can account for a significant contributor to the oceanic REE budget.
DOI: 10.34949/57rt-nr42
title: CALGB 9581: Phase III Randomized Study of Adjuvant Immunotherapy with Monoclonal Antibody 17-1A Versus No Adjuvant Therapy Following Resection for Stage II (Modified Astler-Coller B2) Adenocarcinoma of the Colon_x000D_
DOI: 10.34949/fm7n-cw30
title: MULTICENTER INTERNATIONAL RANDOMIZED PHASE III STUDY OF_x000D_ 5-FU/LV OXALIPLATIN IN THE ADJUVANT TREATMENT OF COLON
DOI: 10.34949/y9s0-nz36
title: CALGB 9581: Phase III Randomized Study of Adjuvant Immunotherapy with Monoclonal Antibody 17-1A Versus No Adjuvant Therapy Following Resection for Stage II (Modified Astler-Coller B2) Adenocarcinoma of the Colon
DOI: 10.5281/zenodo.841301
title: The Forth-Trace Dataset For Human Activity Recognition Of Simple Activities And Postural Transitions Using A Body Area Network

description: The dataset is collected from 15 participants wearing 5 Shimmer wearable sensor nodes on the locations listed in Table 1. The participants performed a series of 16 activities (7 basic and 9 postural transitions), listed in Table 2.

The captured signals are the following:


	3-axis accelerometer
	3-axis gyroscope
	3-axis magnetometer


The sampling rate of the devices is set to 51.2 Hz.

DATASET FILES

The dataset contains the following files:


	partX/partXdev1.csv
	partX/partXdev2.csv
	partX/partXdev3.csv
	partX/partXdev4.csv
	partX/partXdev5.csv


Where X corresponds to the participant ID, and numbers 1-5 to the device IDs indicated in Table 1.

Each .csv file has the following format:


	Column1: Device ID
	Column2: accelerometer x
	Column3: accelerometer y
	Column4: accelerometer z
	Column5: gyroscope x
	Column6: gyroscope y
	Column7: gyroscope z
	Column8: magnetometer x
	Column9: magnetometer y
	Column10: magnetometer z
	Column11: Timestamp
	Column12: Activity Label


Table 1: LOCATIONS


	Left Wrist
	Right Wrist
	Torso
	Right Thigh
	Left Ankle


Table 2: ACTIVITY LABELS

(Arrows (-&gt;) indicate transitions between activities)


	stand
	sit
	sit and talk
	walk
	walk and talk
	climb stairs (up/down)
	climb stairs (up/down) and talk
	stand -&gt; sit
	sit -&gt; stand
	stand -&gt; sit and talk
	sit and talk -&gt; stand
	stand -&gt; walk
	walk -&gt; stand
	stand -&gt; climb stairs (up/down), stand -&gt; climb stairs (up/down) and talk
	climb stairs (up/down) -&gt; walk
	climb stairs (up/down) and talk -&gt; walk and talk
DOI: 10.6084/m9.figshare.20406135
title: A global dataset of microbial community in ticks from metagenome study

description: Ticks are important vectors of various zoonotic pathogens that can infect animals and humans, and most documented tick-borne pathogens have a strong bias towards microorganisms with strong disease phenotypes. The recent development of next-generation sequencing (NGS) has enabled the study of microbial communities, referred to as microbiome. Herein, we undertake a systema[TM1] tic review of published literature to build a comprehensive global dataset of reports on the diversity and distribution of microbiome by NGS in field-collected ticks. The dataset comprised 4418 records (76 literature) of geo-referenced occurrences for 47 species of ticks and 219 microorganism families, revealing a total of 83 [TM2] emerging viruses identified from 6 tick genera and 24 tick species since 1980. The viral, bacterial and eukaryotic composition was compared regarding the tick species, their live stage and types of the specimens, or the geographic location. The data can assist the further investigation of ecological, biogeographical and epidemiological features of the tick-borne disease.
DOI: 10.6084/m9.figshare.21062545
title: Supplementary Material for: Analysis of Barrett’s Esophagus and Its Risk Factors: A Cross-Sectional Study of 10,122 Subjects at a Japanese Health Examination Center

description: <b><i>Introduction:</i></b> <i>Helicobacter pylori</i> eradication is expected to significantly change the prevalence of Barrett’s esophagus (BE). However, few reports on this relationship exist. We analyzed the risk factors of BE using the current consensus on length of BE considering <i>H. pylori</i> infection status. <b><i>Methods:</i></b> We analyzed 10,122 individuals (5,962 men; mean age = 52.9 ± 9.9 years) who had undergone esophagogastroduodenoscopy as part of a medical checkup. Correlations among factors including <i>H. pylori</i> infectious status, endoscopic findings, and BE ≥1 cm were analyzed. <b><i>Results:</i></b> Prevalence of BE, long-segment BE, and esophageal adenocarcinoma was 22.5%, 0.014%, and 0%, respectively. Logistic regression analysis showed that the risk factors for BE were hiatal hernia (odds ratio [OR]: 2.89 [2.59–3.24]), female sex (OR: 0.52 [0.46–0.59]), social drinking (OR:0.77 [0.68–0.87]), <i>H. pylori</i> eradication therapy (OR: 1.34 [1.19–1.51]), proton pump inhibitor (PPI) use (OR: 1.52 [1.18–1.96]), bile reflux (OR: 1.18 [1.04–1.33]), age ≥50 years (OR: 1.13 [1.02–1.26]), and nonsteroidal anti-inflammatory drug (NSAID) use (OR: 1.29 [1.02–1.62]). Although reflux esophagitis (RE) was more common in <i>H. pylori</i>-negative patients (17.2%) than in those after <i>H. pylori</i> eradication therapy (11.8%, <i>p</i> &lt; 0.00001), the latter was correlated with BE, disputing RE as a strong risk factor for BE. Therefore, we conducted a subgroup analysis; most of the risk factors except for PPI use (<i>p</i> = 0.75), H2-receptor antagonist use (<i>p</i> = 0.078), and atrophic gastritis absence (<i>p</i> = 0.72) were positively correlated with BE after <i>H. pylori</i> eradication therapy compared with <i>H. pylori</i>-negative status. <b><i>Conclusions:</i></b> <i>H. pylori</i> eradication, bile reflux, PPI use, and NSAID use were risk factors for BE along with hiatal hernia, male sex, and older age.
DOI: 10.6084/m9.figshare.21063061
title: Supplementary Material for: Stromal Vascular Fraction Reverses the Age-Related Impairment in Revascularization following Injury

description: Adipose-derived stromal vascular fraction (SVF) has emerged as a potential regenerative therapy, but few studies utilize SVF in a setting of advanced age. Additionally, the specific cell population in SVF providing therapeutic benefit is unknown. We hypothesized that aging would alter the composition of cell populations present in SVF and its ability to promote angiogenesis following injury, a mechanism that is T cell-mediated. SVF isolated from young and old Fischer 344 rats was examined with flow cytometry for cell composition. Mesenteric windows from old rats were isolated following exteriorization-induced (EI) hypoxic injury and intravenous injection of one of four cell therapies: (1) SVF from young or (2) old donors, (3) SVF from old donors depleted of or (4) enriched for T cells. Advancing age increased the SVF T-cell population but reduced revascularization following injury. Both young and aged SVF incorporated throughout the host mesenteric microvessels, but only young SVF significantly increased vascular area following EI. This study highlights the effect of donor age on SVF angiogenic efficacy and demonstrates how the ex vivo mesenteric-window model can be used in conjunction with SVF therapy to investigate its contribution to angiogenesis.
DOI: 10.6084/m9.figshare.7022039.v3
title: Supplementary material for "Alterations in Protein Kinase A Substrate Specificity as a Potential Cause of Cushing's Syndrome

description: Supplementary material for "Alterations in Protein Kinase A Substrate Specificity as a Potential Cause of Cushing's Syndrome.This includes Supplementary methods and figures, supplementary datasets, uncropped western blots.<br>
DOI: 10.17632/g2wk65v7v9.1
title: Dataset for "Hepatic inflammation precedes steatosis and is mediated by visceral fat accumulation"

description: This dataset refers to the article "Hepatic inflammation precedes steatosis and is mediated by visceral fat accumulation" published in 2020 at the Journal of Endocrinology (DOI:10.1530/JOE-20-0073). Abstract (DOI:10.1530/JOE-20-0073): The negative aspects of unhealthy eating on obesity and hepatic health are well described. The axis between the adipose tissue and the liver participates in most of the damage caused to this tissue regarding obesogenic diets (OD). At the same time that the effects of consuming simple carbohydrates and saturated fatty acids are known, the effects of the cessation of its intake are scarce. Withdrawing from OD is thought to improve health; despite some studies had shown improvement in hepatic conditions in the long-term, short-term studies were not found. Therefore, we aimed to determine how OD intake and withdrawal would influence visceral and hepatic fat accumulation and inflammation. To this end, male 60-days-old Wistar rats received standard chow (n = 16) or a high-sugar/ high-fat diet (HSHF) for 30 days (n = 32), a cohort of the HSHF-fed animals was then kept 48 h on standard chow (n = 16). In opposition to the generally reported, the results indicate that hepatic inflammation preceded hepatic steatosis. Additionally, inflammatory markers on the liver positively correlated visceral adipokines and visceral fat accumulation mediated them in a deposit-dependent manner. At the same time, a 48-h withdrawal was capable of reverting most of the risen inflammatory mediators, although MyD88 and TNFα persisted and serum non-HDL cholesterol was higher than control levels. It contains the .csv file with the data used in the publication.