cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.88vgm6
title: Occurrence Download

description: A dataset containing 77 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is An annotated checklist of scale insects (Hemiptera: Coccoidea) of Saint Lucia, Lesser Antilles"
 ]
}

 The dataset includes 77 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070030-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ye934s
title: Occurrence Download

description: A dataset containing 17600 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Flora Sumatra: Digitizing and data basing specimens of the Sumatran Flora deposited at Herbarium Universitas Andalas (ANDA)-Part 2"
 ]
}

 The dataset includes 17600 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070032-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.yhx7q4
title: Occurrence Download

description: A dataset containing 13568 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Flora of Sumatra: Vascular plant collection of selected families deposited at Herbarium of Andalas University (ANDA)"
 ]
}

 The dataset includes 13568 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070033-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9bqhya
title: Occurrence Download

description: A dataset containing 7931 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ramalina menziesii Taylor"
 ]
}

 The dataset includes 7931 records from 101 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070034-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cabshf
title: Occurrence Download

description: A dataset containing 1571 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((118.9817 31.99208,119.12647 31.99208,119.12647 32.09414,118.9817 32.09414,118.9817 31.99208))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Animalia"
 ]
}

 The dataset includes 1571 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070035-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3886/e111185v1
title: Data and Code for: Optimal climate policy when damages are unknown

description: Integrated assessment models (IAMs) are economists' primary tool for analyzing the optimal carbon tax. Damage functions, which link temperature to economic impacts, have come under fire because of their assumptions that may be incorrect in significant, but a priori unknowable ways. Here I develop recursive IAM frameworks to model uncertainty, learning, and concern for misspecification about damages. I decompose the carbon tax into channels capturing state uncertainty, insurance motives, and precautionary saving. Damage learning improves ex ante welfare by $750 billion. If damage functions are misspecified and omit the potential for catastrophic damages, robust control may be beneficial ex post.
DOI: 10.25582/data.2024-01.3007393/2499588
title: Data for EMSL Project 60052 from January 2024
DOI: 10.25582/data.2024-01.3007396/2499589
title: Data for EMSL Project 60052 from January 2024
DOI: 10.25582/data.2024-01.3007399/2499590
title: Data for EMSL Project 60052 from January 2024
DOI: 10.25582/data.2024-01.3007403/2499591
title: Data for EMSL Project 60052 from January 2024
DOI: 10.25582/data.2024-01.3007405/2499592
title: Data for EMSL Project 60052 from January 2024
DOI: 10.25582/data.2024-01.3007408/2499593
title: Data for EMSL Project 60052 from January 2024
DOI: 10.25582/data.2024-01.3007415/2499594
title: Data for EMSL Project 60052 from January 2024
DOI: 10.15468/dl.4fntje
title: Occurrence Download

description: A dataset containing 22609 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pachygnatha degeeri Sundevall, 1830)",
 "Geometry POLYGON((-9.36035 44.71551,-10.59082 42.81152,-11.82129 36.80928,-7.69043 36.17336,-3.38379 35.88905,3.12012 38.13456,9.18457 38.20366,11.7334 37.16032,12.78809 34.74161,17.09473 33.79741, 23.15918 34.23451,30.10254 32.62087,33.2666 32.99024,35.72754 35.03,33.00293 35.53223,28.69629 35.17381,28.34473 36.31513,25.7959 37.50973,24.91699 39.90974,28.78418 40.6473,30.71777 41.17865,36.87012 45.213,38.18848 46.98025,38.71582 47.7541,39.94629 47.93107,40.20996 49.61071,37.0459 50.34546,35.72754 50.40152,33.79395 52.26816,31.68457 51.94426,31.4209 53.27835,32.56348 53.43572,30.98145 54.77535,30.89355 55.52863,28.43262 56.02295,27.20215 57.65716,27.37793 58.30949,27.90527 59.17593,29.66309 59.88894,27.6416 60.58697,31.50879 62.75473,28.78418 69.83962,30.89355 70.28912,29.22363 71.55274,21.75293 71.30079,14.28223 70.14036,11.38184 67.47492,4.87793 63.66576,-5.53711 71.52491,-10.63477 71.69129,-21.5332 67.74276,-28.56445 65.36684,-24.3457 61.35461,-9.36035 44.71551))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2021"
 ]
}

 The dataset includes 22609 records from 221 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0169943-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ewfd5x
title: Occurrence Download

description: A dataset containing 14520 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Palmaria palmata (L.) F.Weber & D.Mohr"
 ]
}

 The dataset includes 14520 records from 163 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0142159-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gmqut9
title: Occurrence Download

description: A dataset containing 15912 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is GBR.3_1",
 "TaxonKey is Betula L.",
 "Year 1960-2000"
 ]
}

 The dataset includes 15912 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0169949-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.965h7u
title: Occurrence Download

description: A dataset containing 565 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Deferribacteres"
 ]
}

 The dataset includes 565 records from 108 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0280470-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3h9urw
title: Occurrence Download

description: A dataset listing the 3310777 species recorded in GBIF matching the query:
{ }

 The dataset's 3310777 records were derived from 37447 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0331518-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15454/jpb9rb
title: Carte de la Réserve Utile en eau issue de la Base de Données Géographique des Sols de France

description: Cette carte donne la classe de réserve utile en eau dominante par Unité Cartographique de Sol de la Base de Données Géographique des Sols de France à 1/1 000 000. Les valeurs des classes sont : 1 : &lt; 50 mm 2 : 50-100 mm 3 : 100-150 mm 4 : 150 - 200 mm 5 : &gt;= 200 mm 9 : non sols (villes, lacs, etc.)
DOI: 10.15468/dl.3269yu
title: Occurrence Download

description: A dataset containing 300 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "OccurrenceStatus is Present",
 "TaxonKey is Microlophus atacamensis (Donoso-Barros, 1960)"
 ]
}

 The dataset includes 300 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0035112-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15454/gbxvfw
title: Etude Afrique du Nord - Moyen Orient

description: Données de l'étude ANMO Afrique du Nord - Moyen Orient
DOI: 10.15454/ggaesy
title: A joint database of French catchments and piezometers

description: The database of streamflow and groundwater level data is composed of the daily data of 107 catchments and 355 piezometers, associated into 456 catchment/piezometer pairs. It was gathered and formatted by the Hydrology research team, UR HYCAR, INRAE research institute (http://webgr.inrae.fr). Data were cropped to the 1958-08-01 - 2018-07-31 period. Data are distributed as a .tar.gz archive to download.
DOI: 10.15454/is11zh
title: Aphids Hyperspectral Images

description: Aphids cause severe damage on agricultural crops resulting in significant economic losses and the use of pesticides at high frequency with low efficiency. Monitoring aphid infestations by regular field surveys is time-consuming and does not always provide an accurate spatiotemporal distribution of pests. Therefore, an automated non-destructive method to detect and evaluate aphid infestation would be beneficial for targeted treatments. With this aim, we have created a machine-learning model to identify and quantify aphids, localizing their spatial distribution over the leaves, using One-Class Support-Vector Machine and Laplacian of Gaussians blob detection. To train this model, we built this large database of aphids' hyperspectral images, captured in a controlled laboratory environment. This database contains more than 160 images from three aphid lines distinctive in color, shape and developmental stage, and laying on leaves or neutral backgrounds.
DOI: 10.15454/j0nvik
title: Regeneration and related variables data in spruce-fir-beech mixed uneven aged forests in the French Alps

description: The work was carried out in mixed, uneven aged forests of Picea abies, Abies alba and Fags sylvatica in the French Alps and Jura mountains. This dataset contains raw data files about observations made to calculate regeneration densities, annual height growths, and environmental variables that could potentially impact regeneration. We also include another data file which has a consolidated sheet of all measured and calculated data values that were used for analyses. This includes data from a climate model called SILVAE, with values extracted for our field sites.
DOI: 10.15454/fr68sb
title: Milk Lipidomic in cows and goats

description: These data report milk composition in triacylglycerides and polar lipids of cows and goats fed different lipid-supplemented diets, and analyzed by LC-Mass spectrometry.
DOI: 10.15454/jcyzdi
title: M. incognita predicted secreted proteins

description: To identify putative secreted proteins in the M. incognita protein set (Blanc-Mathieu et al. 2017), we searched for predicted signal peptides (SP) for secretion using SignalP v4 (Petersen, Brunak, von Heijne, Nielsen, 2011). This program improves the differentiation between transmembrane regions present in the N-terminal part of a protein and the presence of a peptide signal. In order to further eliminate this potential problem, predicted signal peptides were cropped, with the remaining part of the proteins subjected to TMHMM (Krogh, Larsson, von Heijne, Sonnhammer, 2001) for prediction of transmembrane regions. Proteins bearing a predicted SP and no transmembrane region were considered as putative secreted proteins. A separate list of predicted secreted proteins specific to plant-parasitic nematode species, according to orthofinder is also provided.
DOI: 10.15454/jqliox
title: Dataset on the Life Cycle Assessment of 44 artisanally produced French Protected Designation of Origin (PDO) cheeses

description: We used Life Cycle Assessment (LCA) to evaluate the environmental impacts of 44 French cheeses that benefit from Protected Designation of Origin (PDO) certification. Our assessments took into account all steps from milk production to the end of the ripening period and the functional unit used was 1 kg of fully ripened cheese. For each cheese, data were collected on all aspects of the process using PDO specifications, technical datasheets, scientific literature, and three expert opinions. Inventories for milk production were obtained from AGRIBALYSE 3.0 and background inventories (electricity mix, gas production, materials, transport, water, cleaning products) were obtained from the Ecoinvent 3.6 database. Simapro software was used to perform all LCAs, using the characterization method "EF 3.0 Method (adapted) V1.00 / EF 3.0 normalisation and weighting set". Our final dataset contains details on products, life cycle inventories (LCI), and LCIA results.
DOI: 10.15454/jxfgpi
title: Monochamus galloprovoncialis catches and pine tree composition in different landscape buffers in Spain

description: Dataset providing the trap captures of Monochamus galloprovincialis, the insect vector of the pinewood nematode Bursaphelenchus xylophilus. The 60 pheromone traps were installed in 2019 in central Spain in 20 mature pine stands varying in % P. pinaster and % P. pinea. The % P. pinaster and % P. pinea in buffers of 50 m, 200 m, 400 m, 600 m and 800m around traps are also provided.
DOI: 10.15454/mvhclq
title: Données et produits lidar drone, réserve forestière naturelle de la Massane - Drone lidar data and products, Massane natural forest reserve

description: Located in the Argeles-sur-Mer municipality, Pyrénées Orientales, the Massane forest reserve is an OSU-OREME long term observatory . A lidar drone survey was carried out on 30 September 2020.0. Telepilots from theTETIS research unit, Montpellier : Eric Larmanou ; Samuel Alleaume. Financement : OSU-OREME. This dataset includes raw data and derived raster products.
DOI: 10.15454/iz2jsn
title: microsatellites Globodera pallida Perou

description: Données de génotypage microsatellites sur populations de Globodera pallida. 86 populations : 84 populations sud Pérou + 2 population sud chili 30 individus par populations 13 locus : Gp106, Gp108, Gp1109, Gp111, Gp112, Gp116, Gp117, Gp118, Gp122, Gp126, Gp135, Gp145, Gr67.
DOI: 10.15454/j2kcxm
title: Dataset from a long-term field experiment on the effect of cropping systems and climate on soil physical characteristics, field crop emergence and yield

description: A long-term field experiment was conducted from 1989 to 2007 in northern France in a laomy soil to assess the cumulative effects of cropping systems on soil compaction, soil porosity, soil structure, crop emergence and yield. Three cropping systems (CSs), including different crop rotations and cultivations (early or late sowing and harvesting), were compared. CS I was the succession of spring pea /winter wheat/oilseed rape (flax from 2001)/winter wheat while CSs II and III were the succession of sugar beet/winter wheat/maize/winter wheat. The latter two CSs consisted of different sowing dates, based on two distinct decision rules aimed at minimizing the risk of soil compaction in the CS II or maximizing the duration of the crop in the CS III. From 2000, a new treatment with superficial tillage (i.e. at 6 cm depth) was introduced into the experiment in order to compare the effects of annual ploughing and reduced tillage on change in soil structure over time. Soil water content was measured for each field operation by taking samples every 0.05 m up to a depth of 0.30 m in the topsoil. Soil compaction and soil structure was evaluated after each sowing using a morphological approach and soil bulk density measurements. The proportion of highly compacted zones, i.e. the zones with a massive structure and no visible macropores in the soil profile, were evaluated with the “profil cultural” method. Dry bulk density was measured with a gamma-ray transmission probe. Seedling emergence rates and crop yield were also measured in relation to cropping systems. This dataset represents an important description of the change in soil compaction level, crop emergence rates and yield, in relation to CSs and climate, and the overall impact on seedbed structure variations for major field crops under northern France conditions. This information can be used as input variables of several soil-crop models aiming at evaluating the impact of CSs and climate on soil compaction and seedbed structures.
DOI: 10.15454/jconrj
title: La carte nationale des stocks de carbone des sols intégrée dans la carte mondiale de la FAO

description: La carte de la France métropolitaine (hors Corse) des stocks de carbone dans les sols a été préparée par l’INRA dans le cadre d’un exercice mondial piloté par le Partenariat Mondial sur les Sols hébergé par l’Organisation des Nations-Unies pour l’alimentation et l’agriculture, la FAO. La carte ainsi produite, en suivant les spécifications décidées par cette instance, a été intégrée à la carte mondiale des stocks de carbone. Elle exploite une précédente production réalisée dans le cadre du programme Global Soil Map (Mulder et al. 2016) et résulte d’un travail de cartographie numérique par modélisation réalisé à partir des données ponctuelles issues des deux programmes nationaux IGCS et RMQS du GIS Sol. La carte transmise à la FAO estime sur une grille de 1 km de résolution les stocks de carbone sur 30 cm. Elle fournit des indications précieuses quant à la distribution spatiale et la variabilité des stocks de carbone dans les sols français, avec toutefois des zones où les estimations présentent de forts niveaux d’incertitude, notamment en région montagneuse. Ce travail confirme les précédentes publications nationales puisque les stocks les plus faibles sont observés en Languedoc-Roussillon (région fortement viticole et caractérisée par un climat chaud et des sols peu épais) et dans quelques zones de culture très intensive (Beauce Chartraine, Nord). Les stocks de carbone faibles à moyens (40-50 t/ha) sont caractéristiques des sols des grandes plaines de culture intensive de France ainsi que des sols limoneux comme, par exemple, le grand Bassin parisien, une partie du Bassin aquitain, le Toulousain et le sillon Rhodanien. Les stocks de carbone moyennement élevés (50-70 t/ha) sont caractéristiques des grandes régions forestières ou fourragères de France (Bretagne, Est, Massif central, Normandie) et les stocks de carbone les plus élevés correspondent à des situations climatiques (sols situés en altitude), minéralogiques (sols volcaniques du Massif central) ou hydriques extrêmes (marais de l’Ouest, delta du Rhône).
DOI: 10.15454/mkm1p4
title: Distribution of 4654 cows milk proteins among lactation stages

description: The “lactation stages” dataset informs on proteins detected during a specific or several lactation stages.
DOI: 10.15454/ifpjap
title: Positive mode LC-MS metabolomics of tomato fruit pericarp of gbp1-c mutants and Wild Type

description: Positive mode LC-MS metabolomic profiling of 15 DPA, 20 DPA, 25 DPA and Red Ripe fruit pericarp from the WT, gbp1-c4 and gbp1-c8 independent mutant lines of tomato.
DOI: 10.15454/jqabmj
title: Interplay between high drift and high selection in small selfing maize populations : simulator and summary data

description: A R script that simulates the evolution of a quantitative trait in Saclay's Divergent Selection Experiments (Saclay's DSEs) breeding schemes, along with a dataset containing summary statistics on the observed response to selection for maize flowering time in Saclay's DSE's
DOI: 10.15454/klhnva
title: Survey on Technical knowledge and Use of production contracts in legume value-chains

description: The main objective of this survey is to examine the role of contractual arrangements between the value chain stakeholders on the development of technical knowledge on grain-legume crops. Developing grain-legumes both in cropping systems and in end-uses suffer from a knowledge gap among practitioners. This gap need to be fulfilled to increase grain-legume competitiveness. Hence, practitioners (or stakeholders) need to develop and exchange knowledge that they need for the running of the value chain based on legumes. This survey will allow understanding how the governance of grain-legume transactions between the stakeholders influences knowledge creation, exchange and thus collective learning in the value chains. This survey was conducted with stakeholders from various value chains on chickpea, on soyabean, on pea and fababean in ten European countries Danemark, France, Germany, Italy, Latvia, Lithuania, Netherlands, Portugal, Switzerland, and United Kingdom. The survey attached is the one used for chickpea. The questions addressed are the same for other crops. Thesurvey was organized within the H2020 LEGVALUE project.
DOI: 10.15454/men81r
title: Dataset on productive, functional traits at first lactation and productive longevity from a herd of 185 Montbéliarde and Prim’Holstein cows managed under a low-input mountainous grassland farm

description: This dataset comprises a group variables describing many performant and functional traits during the entire productive career of Montbéliarde and Prim’Holstein cows. The data was collected between 1999 and 2010 at the at the INRA experimental farm of Marcenat (INRA, UE 1414, France). The experimental site of Marcenat (45º18’21”N, 2º50’13”E; altitude varying between 1015 – 1135m) is located in a mountainous with yearly average air temperature is 11 oC, and the annual average precipitation is 725 mm, with a maximum during autumn and moderate summer droughts. Data concerning dairy performance, BW and BCS, fertility, health events, culling dates and causes along with feeding (forage and concentrate intakes) were recorded. Productive lifespan of cows was described in the dataset by keeping track of the birthdate, age at first calving and age at culling.
DOI: 10.15454/lhgt6c
title: Cell division model: source code and executable

description: This dataset contains the C++ source code for the cell division model described and used in the two related publications. For compilation, you should install the Free-D libraries from Philippe Andrey's lab. These libraries will be available soon from the team public gitlab server (in preparation). In the meanwhile, the code can be run using the provided executable (Ubuntu 20.04).
DOI: 10.15454/lqciw0
title: Transposable Elements prediction and annotation in the C. elegans genome

description: This datasets contains all the essential files produced during the TE prediction, annotation, and post-processing in the C. elegans genome (e.g. TE consensus library, TE annotations, and associated statistics). Also contains the global workflow (used command lines), the REPET configuration files (with parameters) used for this analysis and the in-house python script used to identify canonical TE annotations using TE consensus library and draft TE annotation (REPET output). Download: In order to preserve the folder and file tree structure (easier to reproduce the analyses), select all the files and click on download (original format). The download of a .zip archive should start. Once downloaded, extract the contents of the archive.