cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.c.2185342_d14.v1
title: tiltser_ThroughFocal.zip

description: Through-focal tomographic series of Pt-Cu nanoparticles on an extended carbon support. Note that there is no combined tilt series stack for this dataset. Due to the more complex nature of the through-focal tomography technique, the reconstruction must be generated from the raw through-focal stacks.
DOI: 10.6084/m9.figshare.c.2185342_d9.v1
title: tiltser_W.zip

description: Equally sloped tomography series of tip of a tungsten needle. Series covers full 180 degree range. Note: Raw data is not aligned.
DOI: 10.6084/m9.figshare.c.2185342_d14.v2
title: Through-focal electron tomography series of Pt-Cu nanocatalysts

description: Through-focal tomographic series of Pt-Cu nanoparticles on an extended carbon support. Note that there is no combined tilt series stack for this dataset. Due to the more complex nature of the through-focal tomography technique, the reconstruction must be generated from the raw through-focal stacks.
DOI: 10.60520/ieda/113587
title: Whole-rock major and trace element analyses, and Sr-Nd-Pb isotope results, of volcanic rocks from the Peak District area, England

description: The following dataset contains whole-rock major and trace element analyses, and Sr-Nd-Pb isotope results, of volcanic rocks from the Peak District area, England.
description: Thomas C. Sheldrick, Gregor Hahn, Paula M. Antoshechkina, Michael J. Norry, Stuart S. Egan, Tiffany L. Barry, Chengshi Gan, Camilla M. Wilkinson, Sally A. Gibson, Callum A. Ewan, 2025 "Carboniferous and Early Permian magmatism in England"
DOI: 10.15468/dl.j7ep3b
title: Occurrence Download

description: A dataset containing 706 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hyperiidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 706 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036879-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14170351
title: Global Atlas of Fraction of Snowfall in Forest

description: Global Atlas of Fraction of Snowfall in Forest (FSF)

The FSF (FSF_11km.tif) is the product of the fraction of snowfall (Snowfall_Fraction*) from ERA5-Land (Muñoz Sabater et al., 2019) with the tree cover (TreeCover_11km.tif) from Hansen et al. (2013).

Digital elevation model (DEM_11km.tif) from the Copernicus GLO30 product and Köppen-Geiger climate (Koppen_11km.tif) are also provided on the same grid as FSF.

The FSF is also averaged per hydrological basin of level 3 in the HydroBasin dataset (Lehner et al., 2013) and mountain range (Snethlage et al., 2022) respectively in data_hybas.geojson and data_gmba.geojson.

 

References

Hansen, M. C., Potapov, P. V., Moore, R., Hancher, M., Turubanova, S. A., Tyukavina, A., Thau, D., Stehman, S. V., Goetz, S. J., Loveland, T. R., Kommareddy, A., Egorov, A., Chini, L., Justice, C. O., Townshend, J. R. G. (2013). High-Resolution Global Maps of 21st-Century Forest Cover Change. Science, 342(6160), 850–853. https://doi.org/10.1126/science.1244693

 

Kottek, M., Grieser, J., Beck, C., Rudolf, B., & Rubel, F. (2006). World Map of the Köppen-Geiger climate classification updated. Meteorologische Zeitschrift, 15(3), 259–263. https://doi.org/10.1127/0941-2948/2006/0130

 

Lehner, B., & Grill, G. (2013). Global river hydrography and network routing: baseline data and new approaches to study the world’s large river systems. Hydrological Processes, 27(15), 2171–2186. https://doi.org/10.1002/hyp.9740

 

Muñoz Sabater, J. (2019). ERA5-Land monthly averaged data from 1981 to present [Data set]. Copernicus Climate Change Service (C3S) Climate Data Store (CDS). https://doi.org/doi:10.24381/cds.68d2bb30

 

Snethlage, Mark A., Geschke, J., Ranipeta, A., Jetz, W., Yoccoz, N. G., Körner, C., et al. (2022). A hierarchical inventory of the world’s mountains for global comparative mountain science. Scientific Data, 9(1), 149. https://doi.org/10.1038/s41597-022-01256-y
DOI: 10.5281/zenodo.14170352
title: Global Atlas of Fraction of Snowfall in Forest

description: Global Atlas of Fraction of Snowfall in Forest (FSF)

The FSF (FSF_11km.tif) is the product of the fraction of snowfall (Snowfall_Fraction*) from ERA5-Land (Muñoz Sabater et al., 2019) with the tree cover (TreeCover_11km.tif) from Hansen et al. (2013).

Digital elevation model (DEM_11km.tif) from the Copernicus GLO30 product and Köppen-Geiger climate (Koppen_11km.tif) are also provided on the same grid as FSF.

The FSF is also averaged per hydrological basin of level 3 in the HydroBasin dataset (Lehner et al., 2013) and mountain range (Snethlage et al., 2022) respectively in data_hybas.geojson and data_gmba.geojson.

 

References

Hansen, M. C., Potapov, P. V., Moore, R., Hancher, M., Turubanova, S. A., Tyukavina, A., Thau, D., Stehman, S. V., Goetz, S. J., Loveland, T. R., Kommareddy, A., Egorov, A., Chini, L., Justice, C. O., Townshend, J. R. G. (2013). High-Resolution Global Maps of 21st-Century Forest Cover Change. Science, 342(6160), 850–853. https://doi.org/10.1126/science.1244693

 

Kottek, M., Grieser, J., Beck, C., Rudolf, B., & Rubel, F. (2006). World Map of the Köppen-Geiger climate classification updated. Meteorologische Zeitschrift, 15(3), 259–263. https://doi.org/10.1127/0941-2948/2006/0130

 

Lehner, B., & Grill, G. (2013). Global river hydrography and network routing: baseline data and new approaches to study the world’s large river systems. Hydrological Processes, 27(15), 2171–2186. https://doi.org/10.1002/hyp.9740

 

Muñoz Sabater, J. (2019). ERA5-Land monthly averaged data from 1981 to present [Data set]. Copernicus Climate Change Service (C3S) Climate Data Store (CDS). https://doi.org/doi:10.24381/cds.68d2bb30

 

Snethlage, Mark A., Geschke, J., Ranipeta, A., Jetz, W., Yoccoz, N. G., Körner, C., et al. (2022). A hierarchical inventory of the world’s mountains for global comparative mountain science. Scientific Data, 9(1), 149. https://doi.org/10.1038/s41597-022-01256-y
DOI: 10.6084/m9.figshare.c.3933031_d2
title: MOESM2 of Development of a CRISPR/Cas9 genome editing toolbox for Corynebacterium glutamicum

description: Additional file 2: Table S2. Analysis of PAMs for Cas9 and Cpf1 in the genome sequence of C. glutamicum ATCC 13032.
DOI: 10.6084/m9.figshare.c.3933031_d2.v1
title: MOESM2 of Development of a CRISPR/Cas9 genome editing toolbox for Corynebacterium glutamicum

description: Additional file 2: Table S2. Analysis of PAMs for Cas9 and Cpf1 in the genome sequence of C. glutamicum ATCC 13032.
DOI: 10.5281/zenodo.14502238
title: MILLIY TARBIYA G'OYASINING TARIXIY-PEDAGOGIK ASOSLARI
DOI: 10.5281/zenodo.14502239
title: MILLIY TARBIYA G'OYASINING TARIXIY-PEDAGOGIK ASOSLARI
DOI: 10.6084/m9.figshare.c.3933022_d3
title: Additional file 3: of Genome-wide analysis of the auxin/indoleacetic acid (Aux/IAA) gene family in allotetraploid rapeseed (Brassica napus L.)

description: The orthologous Aux/IAA gene sets among B. rapa (Ar genome), B. oleracea (Co genome), B. napus (An and Cn genomes) and A. thaliana. (XLS 53 kb)
DOI: 10.6084/m9.figshare.c.3933022_d3.v1
title: Additional file 3: of Genome-wide analysis of the auxin/indoleacetic acid (Aux/IAA) gene family in allotetraploid rapeseed (Brassica napus L.)

description: The orthologous Aux/IAA gene sets among B. rapa (Ar genome), B. oleracea (Co genome), B. napus (An and Cn genomes) and A. thaliana. (XLS 53 kb)
DOI: 10.6084/m9.figshare.c.3933022_d2.v1
title: Additional file 2: of Genome-wide analysis of the auxin/indoleacetic acid (Aux/IAA) gene family in allotetraploid rapeseed (Brassica napus L.)

description: Information of Aux/IAA genes identified in B. napus. (XLS 51 kb)
DOI: 10.6084/m9.figshare.c.3933022_d2
title: Additional file 2: of Genome-wide analysis of the auxin/indoleacetic acid (Aux/IAA) gene family in allotetraploid rapeseed (Brassica napus L.)

description: Information of Aux/IAA genes identified in B. napus. (XLS 51 kb)
DOI: 10.6084/m9.figshare.c.3932989_d4
title: Additional file 2: Table S1. of Hybrid de novo genome assembly and centromere characterization of the gray mouse lemur (Microcebus murinus)

description: Quality assessment and assembly statistics of iterative genome assemblies of Microcebus murinus. Table S2. BioNano Genomics in silico physical map production, conflict resolution, and hybrid scaffolding statistics for two M. murinus assemblies (see Fig. 1). Table S3. Hi-C mapping and Lachesis assembly statistics. Statistics for mapping of Hi-C Illumina reads to BioNano generated assemblies are shown. Mapping percentages are based on a total of 2,094,030,784 sequenced Hi-C Illumina reads. Lachesis generated clustering, ordering, and orienting assembly statistics based on the Hi-C mappings for the two rounds of Lachesis are also shown. Table S4. Pilon error correction. The number of bases and indels corrected by Pilon after the application of PBJelly are shown. The length of corrected indel bases are also shown. Table S5. GATK estimates of SNP and indel error rates. Homozygous alternative (non-reference) alleles provide estimates of base and indel error rates in the assembly. A caveat of this is that assembled Illumina reads and PacBio reads are from different individuals. Table S6. Comparative cytogenetic data showing homologous chromosomes between human and mouse lemur. Data summarized from [29], with addition of the X chromosome (inter intercalated, min minute, prox proximal, ter terminal). Table S7. Mouse lemur chromosome assignments to the 33 Lachesis groups identified herein (see Fig. 4 and Additional file 4: Figure S3). Bold font identifies the 23 chromosomes that are supported by comparative cytogenetic data ([29]; Fig. 4, Additional file 2: Table S6). The remaining 10 chromosomes are putative assignments pending FISH confirmation. Table S8. Microcebus murinus samples used for genetic data presented herein. Mitochondrial haplotype identification for each sample is based on phylogenetic analyses of 1140 bp of the cytochrome-b gene. BCM Baylor College of Medicine, DLC Duke Lemur Center. (XLSX 36 kb)
DOI: 10.6084/m9.figshare.c.3932989_d4.v1
title: Additional file 2: Table S1. of Hybrid de novo genome assembly and centromere characterization of the gray mouse lemur (Microcebus murinus)

description: Quality assessment and assembly statistics of iterative genome assemblies of Microcebus murinus. Table S2. BioNano Genomics in silico physical map production, conflict resolution, and hybrid scaffolding statistics for two M. murinus assemblies (see Fig. 1). Table S3. Hi-C mapping and Lachesis assembly statistics. Statistics for mapping of Hi-C Illumina reads to BioNano generated assemblies are shown. Mapping percentages are based on a total of 2,094,030,784 sequenced Hi-C Illumina reads. Lachesis generated clustering, ordering, and orienting assembly statistics based on the Hi-C mappings for the two rounds of Lachesis are also shown. Table S4. Pilon error correction. The number of bases and indels corrected by Pilon after the application of PBJelly are shown. The length of corrected indel bases are also shown. Table S5. GATK estimates of SNP and indel error rates. Homozygous alternative (non-reference) alleles provide estimates of base and indel error rates in the assembly. A caveat of this is that assembled Illumina reads and PacBio reads are from different individuals. Table S6. Comparative cytogenetic data showing homologous chromosomes between human and mouse lemur. Data summarized from [29], with addition of the X chromosome (inter intercalated, min minute, prox proximal, ter terminal). Table S7. Mouse lemur chromosome assignments to the 33 Lachesis groups identified herein (see Fig. 4 and Additional file 4: Figure S3). Bold font identifies the 23 chromosomes that are supported by comparative cytogenetic data ([29]; Fig. 4, Additional file 2: Table S6). The remaining 10 chromosomes are putative assignments pending FISH confirmation. Table S8. Microcebus murinus samples used for genetic data presented herein. Mitochondrial haplotype identification for each sample is based on phylogenetic analyses of 1140 bp of the cytochrome-b gene. BCM Baylor College of Medicine, DLC Duke Lemur Center. (XLSX 36 kb)
DOI: 10.15468/dl.pwcak2
title: Occurrence Download

description: A dataset containing 82439 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Ambystoma tigrinum (Green, 1825), Lithobates sylvaticus (LeConte, 1825))"
 ]
}

 The dataset includes 82439 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036878-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3938173_d9.v1
title: Additional file 5: Table S3. of Genome-wide association mapping of black point reaction in common wheat (Triticum aestivum L.)

description: The black point scores of the 166 wheat accessions across the five environments. (XLSX 25Â kb)
DOI: 10.15468/dl.yd6nrd
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Physaliidae",
 "Geometry POLYGON((170 20, 170 50, 120 50, 120 20, 170 20))",
 "HasCoordinate is true"
 ]
}

 The dataset includes 63 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036882-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fhgh74
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ctenoplon x-littera (Thomson, 1865)"
 ]
}

 The dataset includes 15 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036881-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3931672_d1.v1
title: MOESM1 of A proteomic approach to understanding the pathogenesis of idiopathic macular hole formation

description: Additional file 1: TableÂ 4. SRM assay for protein changes related to the pathogenesis of human idiopathic macular hole.
DOI: 10.6084/m9.figshare.c.3931672_d2
title: MOESM2 of A proteomic approach to understanding the pathogenesis of idiopathic macular hole formation

description: Additional file 2: TableÂ 1. Proteins identified in the vitreous.
DOI: 10.6084/m9.figshare.c.3931672_d1
title: MOESM1 of A proteomic approach to understanding the pathogenesis of idiopathic macular hole formation

description: Additional file 1: TableÂ 4. SRM assay for protein changes related to the pathogenesis of human idiopathic macular hole.
DOI: 10.6084/m9.figshare.c.3931624_d6.v1
title: Additional file 6: Table S9. of Long-term balancing selection contributes to adaptation in Arabidopsis and its relatives

description: Structure of the 80 A. thaliana samples. The values for Group 1 and Group 2 indicate the corresponding ancestral fraction, respectively. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3931624_d6
title: Additional file 6: Table S9. of Long-term balancing selection contributes to adaptation in Arabidopsis and its relatives

description: Structure of the 80 A. thaliana samples. The values for Group 1 and Group 2 indicate the corresponding ancestral fraction, respectively. (XLSX 12 kb)
DOI: 10.6084/m9.figshare.c.3931624_d5
title: Additional file 5: Table S8. of Long-term balancing selection contributes to adaptation in Arabidopsis and its relatives

description: Ecological analysis: source data and results. A. The 48 ecological factors used in the analysis and the divergence of the two types of samples for each gene with regard to these factors. In each column of the four genes, the FDR-corrected P values are listed, and the significant ones are highlighted in red. B. Sample size distribution based on the haplotype phasing for each gene before and after thinning of the 1135 genomes. C. Sample information and classification for each gene. â  -â   indicates that the corresponding sample is not phased properly in the corresponding gene. D. The ecological significance of the four genes. (XLSX 52 kb)
DOI: 10.6084/m9.figshare.c.3931624_d5.v1
title: Additional file 5: Table S8. of Long-term balancing selection contributes to adaptation in Arabidopsis and its relatives

description: Ecological analysis: source data and results. A. The 48 ecological factors used in the analysis and the divergence of the two types of samples for each gene with regard to these factors. In each column of the four genes, the FDR-corrected P values are listed, and the significant ones are highlighted in red. B. Sample size distribution based on the haplotype phasing for each gene before and after thinning of the 1135 genomes. C. Sample information and classification for each gene. â  -â   indicates that the corresponding sample is not phased properly in the corresponding gene. D. The ecological significance of the four genes. (XLSX 52 kb)
DOI: 10.6084/m9.figshare.c.3931624_d2.v1
title: Additional file 2: Table S3. of Long-term balancing selection contributes to adaptation in Arabidopsis and its relatives

description: Demographic inference results from fastsimcoal2. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3931624_d2
title: Additional file 2: Table S3. of Long-term balancing selection contributes to adaptation in Arabidopsis and its relatives

description: Demographic inference results from fastsimcoal2. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.c.3929248_d4
title: Additional file 4: of Avian infectious bronchitis virus disrupts the melanoma differentiation associated gene 5 (MDA5) signaling pathway by cleavage of the adaptor protein MAVS

description: The datasets analysed during the current study. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.c.3929101_d10
title: Additional file 19: Table S24. of Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla)

description: Expression changes of JA related genes in response to exogenous auxin treatment. (TXT 3Â kb)
DOI: 10.6084/m9.figshare.c.3929101_d9.v1
title: Additional file 18: Table S23. of Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla)

description: Expression changes of ABA related genes in response to exogenous auxin treatment. (TXT 2Â kb)
DOI: 10.6084/m9.figshare.c.3929101_d8.v1
title: Additional file 17: Table S22. of Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla)

description: Expression changes of ethylene related genes in response to exogenous auxin treatment. (TXT 7Â kb)
DOI: 10.6084/m9.figshare.c.3929101_d9
title: Additional file 18: Table S23. of Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla)

description: Expression changes of ABA related genes in response to exogenous auxin treatment. (TXT 2Â kb)
DOI: 10.6084/m9.figshare.c.3929101_d8
title: Additional file 17: Table S22. of Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla)

description: Expression changes of ethylene related genes in response to exogenous auxin treatment. (TXT 7Â kb)
DOI: 10.7294/26523958.v1
title: Dangerous Harbor Project - Lancaster County - Reel 261 - Fragments, 1653-1850 - TIFFs 1-6

description: This dataset includes 6 TIFF files showing fragments from miscellaneous documents from Lancaster County in Virginia. These documents were collected in association with the Dangerous Harbor Project which used courthouse documents to identify escaped unfree laborers in the 17th century Chesapeake and the punishments associated with their escape. <br>To learn more about this project, please go to the Dangerous Harbor Website.
DOI: 10.15468/dl.9t2vxe
title: Occurrence Download

description: A dataset containing 659 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "TaxonKey is Quercus canariensis Willd."
 ]
}

 The dataset includes 659 records from 36 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0036884-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3929101_d7
title: Additional file 16: Table S21. of Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla)

description: Expression changes of GA related genes in response to exogenous auxin treatment. (TXT 1Â kb)
DOI: 10.6084/m9.figshare.c.3929101_d7.v1
title: Additional file 16: Table S21. of Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla)

description: Expression changes of GA related genes in response to exogenous auxin treatment. (TXT 1Â kb)
DOI: 10.6084/m9.figshare.c.3929101_d6
title: Additional file 15: Table S20. of Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla)

description: Expression changes of cytokinin related genes in response to exogenous auxin treatment. (TXT 1Â kb)
DOI: 10.6084/m9.figshare.c.3929101_d6.v1
title: Additional file 15: Table S20. of Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla)

description: Expression changes of cytokinin related genes in response to exogenous auxin treatment. (TXT 1Â kb)
DOI: 10.6084/m9.figshare.c.3929143_d2
title: Additional file 2 of The interplay of demography and selection during maize domestication and expansion

description: Table S1. Basic information regarding the sampled maize landrace accessions. NM New Mexico. (XLSX 11 kb).
DOI: 10.6084/m9.figshare.c.3929143_d2.v1
title: Additional file 2 of The interplay of demography and selection during maize domestication and expansion

description: Table S1. Basic information regarding the sampled maize landrace accessions. NM New Mexico. (XLSX 11 kb).
DOI: 10.6084/m9.figshare.c.3929101_d5
title: Additional file 14: Table S19. of Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla)

description: Expression changes of cell wall related genes in response to exogenous auxin treatment. (TXT 6Â kb)
DOI: 10.6084/m9.figshare.c.3929101_d5.v1
title: Additional file 14: Table S19. of Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla)

description: Expression changes of cell wall related genes in response to exogenous auxin treatment. (TXT 6Â kb)
DOI: 10.6084/m9.figshare.c.3929101_d4.v1
title: Additional file 13: Table S18. of Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla)

description: Expression of putative PhLBD members in response to auxin treatment. (TXT 1Â kb)