cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.6d8jtg
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhogeessa menchuae Baird, Marchán-Rivadeneira, Pérez & Baker, 2012"
 ]
}

 The dataset includes 7 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018868-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kmxc52
title: Occurrence Download

description: A dataset containing 13 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pristimantis kuri Yánez-Muñoz, Sánchez-Nivicela & Reyes-Puig, 2016"
 ]
}

 The dataset includes 13 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018870-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g6t7vt
title: Occurrence Download

description: A dataset containing 1179 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Attagenus pellio (Linnaeus, 1758)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 1179 records from 107 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018867-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p85zgz
title: Occurrence Download

description: A dataset containing 1484 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "Country is Benin",
 "TaxonKey is Blighia sapida K.D.Koenig"
 ]
}

 The dataset includes 1484 records from 61 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018869-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cr2wcu
title: Occurrence Download

description: A dataset containing 2354 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Megatoma undata (Linnaeus, 1758)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 2354 records from 136 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018871-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9j6h6v
title: Occurrence Download

description: A dataset containing 1861 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Ctesias serra (Fabricius, 1792)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 1861 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018872-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mshyub
title: Occurrence Download

description: A dataset containing 1432 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Anthrenus museorum (Linnaeus, 1761)",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 1432 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018873-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.68t65f
title: Occurrence Download

description: A dataset containing 461 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pristimantis labiosus (Lynch, Ruiz-Carranza & Ardila-Robayo, 1994)"
 ]
}

 The dataset includes 461 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018874-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q6y5v8
title: Occurrence Download

description: A dataset containing 1406 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Ptinus rufipes Olivier, 1790",
 "PhylumKey is Arthropoda",
 "Year is greater than or equal to 1992",
 "Year is less than or equal to 2012",
 "Geometry POLYGON((-26 34, 42 34, 42 70, -26 70, -26 34))"
 ]
}

 The dataset includes 1406 records from 85 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018875-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z3cjc7
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Stipa dregeana",
 "Geometry POLYGON((29.76451 -26.09643, 32.1599 -26.09643, 32.1599 -22.51877, 29.76451 -22.51877, 29.76451 -26.09643))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030443-250525065834625/datasets/export for details.
DOI: 10.34740/kaggle/dsv/14171411
title: Layline Shareholder activism dataset
DOI: 10.5281/zenodo.17876555
title: Q.A.S.T  ANEXO I

description: ANEXO  I:

 

 Teoría de Anclaje Cuántico del Espacio-Tiempo (QAST).

Este documento conceptual establece los principios fundamentales del Mecanismo de Estabilidad del Agujero de Gusano (QAST). Detalla el proceso por el cual se genera la fuerza de antigravedad localizada necesaria para estabilizar una garganta de agujero de gusano transitable.  La fuerza repulsiva se postula como la Inercia Negativa (Ineg), una propiedad de la Energía Oscura (EO) caracterizada por presión negativa Esta Inercia Negativa es el combustible de la QAST.  El documento formaliza que la manipulación de la Ineg es lograda por el Tensor de Anclaje (TA) a través de una Resonancia Geométrica iniciada por el Efecto Casimir. El Anexo incluye la Ecuación de Campo de Einstein modificada con los tensores de anclaje y Casimir, proporcionando la base teórica para la estabilidad.
DOI: 10.5281/zenodo.17876556
title: Q.A.S.T  ANEXO I

description: ANEXO  I:

 

 Teoría de Anclaje Cuántico del Espacio-Tiempo (QAST).

Este documento conceptual establece los principios fundamentales del Mecanismo de Estabilidad del Agujero de Gusano (QAST). Detalla el proceso por el cual se genera la fuerza de antigravedad localizada necesaria para estabilizar una garganta de agujero de gusano transitable.  La fuerza repulsiva se postula como la Inercia Negativa (Ineg), una propiedad de la Energía Oscura (EO) caracterizada por presión negativa Esta Inercia Negativa es el combustible de la QAST.  El documento formaliza que la manipulación de la Ineg es lograda por el Tensor de Anclaje (TA) a través de una Resonancia Geométrica iniciada por el Efecto Casimir. El Anexo incluye la Ecuación de Campo de Einstein modificada con los tensores de anclaje y Casimir, proporcionando la base teórica para la estabilidad.
DOI: 10.17605/osf.io/rhqbv
title: Data for "Interannual influence of Antarctic sea ice on Southern Hemisphere stratosphere-troposphere coupling"

description: This dataset is made up of climate model output that is used in the manuscript submitted to Geophysical Research Letters titled “Interannual influence of Antarctic sea ice on Southern Hemisphere stratosphere-troposphere coupling” by Rea et al. There is data from two model ensembles: version 4 of the Whole Atmosphere Community Climate Model (WACCM) and version 6 of the Community Atmosphere Model (CAM6). We refer you to the manuscript for more detailed information on how the simulations are forced. Data for six variables is available from both models: 200 hPa zonal wind, zonal-mean zonal wind, zonally averaged eddy heat flux (v’theta’), the eddy portion of the geopotential height latitudinally averaged between 50S and 70S, sea level pressure, and precipitation. For WACCM, there are two 10 member ensembles with filenames beginning with "AMIP..." and "CSIC..." and for CAM there are two 8 member ensembles with filenames beginning with "CAM..."
DOI: 10.5281/zenodo.17943749
title: Model data for: Task success in trained spiking neural network models coincides with emergence of cross-stimulus-modulated inhibition

description: Zip files of a sample experiment in each major experimental category are listed below. 

base.zip: baseline model (single readout unit), dual-training (task and rate)

rate.zip: baseline model, rate-only training

remove_ee.zip: baseline model without recurrent e-->e connectivity, dual-training

Each npz file contains data for 10 epochs (100 batch updates of 30 trials each) beginning with file "1-10.npz" and ending with file "991-1000.npz". For example, the first 10 epochs can be loaded using data = np.load('1-10.npz'). Data variables can be accessed using data['variable_name']. The data variable names are:

true_y and pred_y (true and predicted output): shaped [100 batches, 30 trials-per-batch, 4080 timesteps].

spikes: shaped [100 batches, 30 trials-per-batch, 4080 timesteps, 300 neurons] the first 240 neurons are excitatory. 

step_task_loss and step_rate_loss: shaped [100 batches].

epoch_loss: shaped [10 epochs].

tv0.postweights are the weights for the input layer after each batch update, and tv0.gradients are the gradients for the input layer for each batch update.

In similar fashion, tv1 is the main recurrent layer and tv2 is the output layer. You can access postweights and gradients for both. 

tv0 variables are shaped [100 batches, 16 inputs, 300 neurons]. tv1 variables are shaped [100 batches, 300 neurons, 300 neurons], and tv2 variables are shaped [100 batches, 300 neurons, 1 output]. 

Weights and gradients are always saved after each batch update. The initial weights are saved in separate files named "input_preweights.npy", "main_preweights.npy", and "output_preweights.npy". 

We only provide sample experiments for three categories here due to data storage limitations (50GB on Zenodo; the total experimental data exceeds 6TB); additional data can be made available upon request. For example, sample experiments in additional categories (baseline task-only training, 1hot output encoding, and 1hot without recurrent e-->e connectivity) are readily available. Full datasets for each experimental category can also be arranged.
DOI: 10.5281/zenodo.17943748
title: Model data for: Task success in trained spiking neural network models coincides with emergence of cross-stimulus-modulated inhibition

description: Zip files of a sample experiment in each major experimental category are listed below. 

base.zip: baseline model (single readout unit), dual-training (task and rate)

rate.zip: baseline model, rate-only training

remove_ee.zip: baseline model without recurrent e-->e connectivity, dual-training

Each npz file contains data for 10 epochs (100 batch updates of 30 trials each) beginning with file "1-10.npz" and ending with file "991-1000.npz". For example, the first 10 epochs can be loaded using data = np.load('1-10.npz'). Data variables can be accessed using data['variable_name']. The data variable names are:

true_y and pred_y (true and predicted output): shaped [100 batches, 30 trials-per-batch, 4080 timesteps].

spikes: shaped [100 batches, 30 trials-per-batch, 4080 timesteps, 300 neurons] the first 240 neurons are excitatory. 

step_task_loss and step_rate_loss: shaped [100 batches].

epoch_loss: shaped [10 epochs].

tv0.postweights are the weights for the input layer after each batch update, and tv0.gradients are the gradients for the input layer for each batch update.

In similar fashion, tv1 is the main recurrent layer and tv2 is the output layer. You can access postweights and gradients for both. 

tv0 variables are shaped [100 batches, 16 inputs, 300 neurons]. tv1 variables are shaped [100 batches, 300 neurons, 300 neurons], and tv2 variables are shaped [100 batches, 300 neurons, 1 output]. 

Weights and gradients are always saved after each batch update. The initial weights are saved in separate files named "input_preweights.npy", "main_preweights.npy", and "output_preweights.npy". 

We only provide sample experiments for three categories here due to data storage limitations (50GB on Zenodo; the total experimental data exceeds 6TB); additional data can be made available upon request. For example, sample experiments in additional categories (baseline task-only training, 1hot output encoding, and 1hot without recurrent e-->e connectivity) are readily available. Full datasets for each experimental category can also be arranged.
DOI: 10.6084/m9.figshare.30847111
title: Metabolic flux analysis revealed key roles of ArcB in ADI pathway and IlvC in BCAA biosynthesis during <i>Streptococcus suis</i> anaerobic growth and infection

description: Critical metabolic enzymes and pathways specific to bacterial adaptation in different host microenvironments directly contribute to bacterial pathogenicity. In this study, a virulent strain of the important zoonotic pathogen <i>Streptococcus suis</i> was found to show enhanced growth under anaerobic conditions compared to aerobic conditions. Transcriptomic analysis found a significant suppression of many central metabolic genes during anaerobic growth of <i>S. suis</i>. The transcriptomic data were used to reconstruct a genome-scale metabolic network to assess the distribution of metabolic fluxes in <i>S. suis</i> under different conditions. Significant activation of the arginine deiminase (ADI) and branched-chain amino acid (BCAA) biosynthesis pathways was identified. Gene deletion mutants of <i>arcB</i> and <i>ilvC</i> participating in these two pathways, respectively, were constructed. Compared to the wild-type strain, the Δ<i>arcB</i> mutant showed more significant growth deficiency under anaerobic conditions than under aerobic conditions. Accumulation of ATP and NH<sub>3</sub>, the metabolites of the ADI pathway, was significantly higher when <i>S. suis</i> was cultured under anaerobic conditions, and this effect was attenuated in the Δ<i>arcB</i> mutant. The knockout of IlvC of the BCAA pathway disrupted the normal growth of <i>S. suis</i> in valine- and isoleucine-limited medium under anaerobic conditions. Both Δ<i>arcB</i> and Δ<i>ilvC</i> showed attenuation in mice with decreased lethality, bacterial loads in tissues, and cytokine levels in serum, with the hypoxia-induced gene up-regulated in tissues. Therefore, ADI and BCAA pathways are critical for <i>S. suis</i> survival in response to hypoxia and infection <i>in vivo</i>, with ArcB and IlvC being promising drug targets.
DOI: 10.6084/m9.figshare.30847111.v2
title: Metabolic flux analysis revealed key roles of ArcB in ADI pathway and IlvC in BCAA biosynthesis during <i>Streptococcus suis</i> anaerobic growth and infection

description: Critical metabolic enzymes and pathways specific to bacterial adaptation in different host microenvironments directly contribute to bacterial pathogenicity. In this study, a virulent strain of the important zoonotic pathogen <i>Streptococcus suis</i> was found to show enhanced growth under anaerobic conditions compared to aerobic conditions. Transcriptomic analysis found a significant suppression of many central metabolic genes during anaerobic growth of <i>S. suis</i>. The transcriptomic data were used to reconstruct a genome-scale metabolic network to assess the distribution of metabolic fluxes in <i>S. suis</i> under different conditions. Significant activation of the arginine deiminase (ADI) and branched-chain amino acid (BCAA) biosynthesis pathways was identified. Gene deletion mutants of <i>arcB</i> and <i>ilvC</i> participating in these two pathways, respectively, were constructed. Compared to the wild-type strain, the Δ<i>arcB</i> mutant showed more significant growth deficiency under anaerobic conditions than under aerobic conditions. Accumulation of ATP and NH<sub>3</sub>, the metabolites of the ADI pathway, was significantly higher when <i>S. suis</i> was cultured under anaerobic conditions, and this effect was attenuated in the Δ<i>arcB</i> mutant. The knockout of IlvC of the BCAA pathway disrupted the normal growth of <i>S. suis</i> in valine- and isoleucine-limited medium under anaerobic conditions. Both Δ<i>arcB</i> and Δ<i>ilvC</i> showed attenuation in mice with decreased lethality, bacterial loads in tissues, and cytokine levels in serum, with the hypoxia-induced gene up-regulated in tissues. Therefore, ADI and BCAA pathways are critical for <i>S. suis</i> survival in response to hypoxia and infection <i>in vivo</i>, with ArcB and IlvC being promising drug targets.
DOI: 10.6084/m9.figshare.30847111.v1
title: Metabolic flux analysis revealed key roles of ArcB in ADI pathway and IlvC in BCAA biosynthesis during <i>streptococcus suis</i> anaerobic growth and infection

description: Critical metabolic enzymes and pathways specific to bacterial adaptation in different host microenvironments directly contribute to bacterial pathogenicity. In this study, a virulent strain of the important zoonotic pathogen <i>Streptococcus suis</i> was found to show enhanced growth under anaerobic conditions compared to that under aerobic conditions. Transcriptomic analysis found a significant suppression of many central metabolic genes during anaerobic growth of <i>S. suis</i>. The transcriptomic data were used to reconstruct a genome-scale metabolic network to assess the distribution of metabolic fluxes in <i>S. suis</i> under different conditions. Significant activation of the arginine deiminase (ADI) and branched-chain amino acid (BCAA) biosynthesis pathways was identified. The gene deletion mutants of <i>arcB</i> and <i>ilvC</i> participating in these two pathways, respectively, were constructed. Compared to the wild-type strain, the mutant Δ<i>arcB</i> showed more significant growth deficiency under anaerobic conditions than under aerobic conditions. Accumulation of ATP and NH<sub>3</sub>, the metabolites of the ADI pathway, were significantly higher when <i>S. suis</i> was cultured under anaerobic conditions, and this effect was attenuated in the mutant Δ<i>arcB</i>. The knockout of IlvC of the BCAA pathway disrupted the normal growth of <i>S. suis</i> in valine- and isoleucine-limited medium under anaerobic conditions. Both Δ<i>arcB</i> and Δ<i>ilvC</i> showed attenuation in mice with decreased lethality, bacterial loads in tissues and cytokine levels in serum, with the hypoxia-induced gene up-regulated in tissues. Therefore, ADI and BCAA pathways are critical for <i>S. suis</i> survival in response to hypoxia and infection <i>in vivo</i>, with ArcB and IlvC to be promising drug targets.
DOI: 10.13140/rg.2.2.11034.09927
title: 2005. 50 Años con Merlín y familia (Video Docummentary)
DOI: 10.15468/dl.xstmed
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-36.26783 19.45085,60.03740 19.45085,60.03740 57.94719,-36.26783 57.94719,-36.26783 19.45085))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pseudosimnia adriatica"
 ]
}

 The dataset includes 37 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054239-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.7910/dvn/44xljm
title: Replication Data for: Prosecuting the Political Opposition: The Court and Subnational Variation in the Onset of the Maoist Conflict in Nepal

description: Courts and judicial institutions are often overlooked in armed conflict research. Before the rebel group is formed and initiates armed confrontation, states and their allies — directly and indirectly — mobilize the court to prosecute selected individuals to deter political opposition and establish state legitimacy. This article argues that the state can directly prosecute potential political challengers through criminal cases, deterring aspiring political leaders from organizing the rebellion at the local level. Similarly, the state can indirectly use its local collaborators to prosecute potential civilian supporters in the court by filing civil cases, intensifying local discontent, and exacerbating underlying grievances against the state and its local collaborators. The state’s direct and indirect involvement in generating legitimacy affects the subnational risk of conflict onset differently. Analyses of original data for all 75 district-level courts in Nepal between 1991 and 2006 and the onset of the Maoist conflict show robust support for the arguments.
DOI: 10.17605/osf.io/7a56r
title: Masonic Institute for the Developing Brain (MIDB) Precision Brain Atlas

description: A collection of neural network atlases
DOI: 10.15468/dl.e6h7vy
title: Occurrence Download

description: A dataset containing 5275 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Salix udensis"
 ]
}

 The dataset includes 5275 records from 126 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054241-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25909/19759123
title: Patch 05 - Chardonnay

description: Canopy images captured at different developmental stages and measures of canopy architecture. Bud, shoot and inflorescence counts with annotated images. Pruning weights and harvest measures.
DOI: 10.25909/19759123.v1
title: Patch 05 - Chardonnay

description: Canopy images captured at different developmental stages and measures of canopy architecture. Bud, shoot and inflorescence counts with annotated images. Pruning weights and harvest measures.
DOI: 10.25909/19759156
title: Patch 06 - Cabernet Sauvignon

description: Canopy images captured at different developmental stages and measures of canopy architecture. Bud, shoot and inflorescence counts with annotated images. Pruning weights and harvest measures.
DOI: 10.25909/19759156.v1
title: Patch 06 - Cabernet Sauvignon

description: Canopy images captured at different developmental stages and measures of canopy architecture. Bud, shoot and inflorescence counts with annotated images. Pruning weights and harvest measures.