cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48597/c6zh-js62
title: Measurement of Ammonium at Strath Vaich Dam

description: Measurement of Ammonium at Strath Vaich Dam
DOI: 10.48597/d4yf-p4dy
title: Measurement of POPs (persistent organic pollutants) at Monte Velho

description: Measurement of POPs (persistent organic pollutants) at Monte Velho
DOI: 10.48597/debn-qsh3
title: Measurement of PCB_209 at Alert

description: Measurement of PCB_209 at Alert
DOI: 10.48597/dgs4-nb37
title: Measurement of BDE_138 at Alert

description: Measurement of BDE_138 at Alert
DOI: 10.6084/m9.figshare.24623943
title: MS analysis of Blastocrithidia nonstop (transcriptome-predicted peptides)

description: Mass spectrometry analysisThe proteins of <i>B. nonstop</i> in detergent-soluble fractions were digested with sequencing grade modified trypsin (Promega) and the resulting peptides were analyzed by two-dimensional liquid chromatography-tandem mass spectrometry using MALDI-TOF/TOF mass spectrometer TOF Impact II (Bruker Co, Billerica, USA) at the Proteomics Core Facility (Central European Institute of Technology, CEITEC, Brno, Czech Republic). The peptides were predicted based on the <i>B. nonstop</i> and <i>B. triatomae</i> genomes translated in 6 frames with <i>Blastocrithidia</i> genetic code using a custom Python script.
DOI: 10.6084/m9.figshare.24623943.v1
title: MS analysis of Blastocrithidia nonstop (transcriptome-predicted peptides)

description: Mass spectrometry analysisThe proteins of <i>B. nonstop</i> in detergent-soluble fractions were digested with sequencing grade modified trypsin (Promega) and the resulting peptides were analyzed by two-dimensional liquid chromatography-tandem mass spectrometry using MALDI-TOF/TOF mass spectrometer TOF Impact II (Bruker Co, Billerica, USA) at the Proteomics Core Facility (Central European Institute of Technology, CEITEC, Brno, Czech Republic). The peptides were predicted based on the <i>B. nonstop</i> and <i>B. triatomae</i> genomes translated in 6 frames with <i>Blastocrithidia</i> genetic code using a custom Python script.
DOI: 10.17630/c2137162-53d3-4722-bc51-ae2ee579ce61
title: One-pot Access to Functionalised Malamides via Organocata-lytic Enantioselective Formation of Spirocyclic β-Lactone-Oxindoles and Double Ring-opening (dataset)
DOI: 10.15468/dl.p7p9t7
title: Occurrence Download

description: A dataset containing 143 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eudyptes sclateri Buller, 1888",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1950",
 "Year is less than or equal to 2014"
 ]
}

 The dataset includes 143 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010041-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.23p8s4
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cardioglossa occidentalis Blackburn, Kosuch, Schmitz, Burger, Wagner, Gonwouo, Hillers & Rödel, 2008"
 ]
}

 The dataset includes 71 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010042-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17630/f2a655d8-85c7-4bc0-b01b-b6f67aab2f07
title: Optical mapping of ground reaction force dynamics in freely behaving Drosophila melanogaster larvae (dataset)

description: Research data for fulfilment of OpenAccess requirements.
DOI: 10.6084/m9.figshare.23666736
title: Test Code Refactoring Unveiled: Where and How Does It Affect Test Code Quality and Effectiveness?

description: This repository stores all the artifacts used in the study " Test Code Refactoring Unveiled: Where and How Does It Affect Test Code Quality and Effectiveness?"<br>The<b> projects_selection.xlsx </b>file presents the filters applied to select open-source Java projects.The <b>projects_characterization.csv </b>file characterizes the projects in terms of LOC, number of test files, contributors, and attribute the project to a dataset.The <b>type_refactoring.csv </b>file presents the classification of test code changes in pure or floss refactorings. The <b>contributions_guidelines.csv </b>presents the investigation of tools and guidelines for ensuring test code quality in the selected projects.The<b> tools_data_collection.zip</b> presents the metrics collected from test classes with VITRuM, test smells with tsDetect, and refactorings with TestRefactoringMiner.The<b> static_data.zip</b> presents the scripts to organize the static data from 65 projects that compose Dataset A.The<b> dynamic_data.zip</b> presents the scripts to organize the dynamic and static data from 12 projects that compose Dataset B.The<b> statistics.zip</b> presents the scripts and results of our investigation.<br>
DOI: 10.22008/fk2/jhxacv
title: DK-model HIP - modelsetup 500- and 100m (DK6)

description: This .zip file contains DK-model HIP in 500 and 100m resolution. Simulated results with this model are shared and displayed at HIP and KAMP portals. GEUS har ophavsretten til DK-modellen Vi ønsker, at modellen bruges bredt ved løsning af opgaver eller nye undersøgelser, og giver derfor alle brugsret til modellen og data på følgende vilkår: 1.GEUS angives som kilde. 2.Brugen sker på eget ansvar, og dette skal fremgå overfor brugerens samarbejdspartnere. 3.For at sikre modellens udvikling informeres GEUS pr. email: geus@geus.dk i tilfælde, hvor der sker ændringer i modelkonceptet eller justeringer af den konceptuelle model (herunder den hydrostratigrafiske model). 4.Brugeren accepterer endvidere, at GEUS benytter sådanne ændringer/justeringer til en fremtidig opdatering af DK-modellen. National Vandressource Model udvikles og vedligeholdes løbende. Hvis man vil benytte versioner, der endnu ikke er frigivet, kan man henvende sig til os og få dem udleveret på ad hoc-basis. Det skal bemærkes, at DK-model HIP primært er udviklet og kalibreret til at simulere det terrænnære grundvand og således ikke uden videre kan forventes at kunne bruges i vandressource-sammenhænge.
DOI: 10.22008/fk2/jhxacv/f6x5d0
title: DK6_HIPmodels.zip

description: :unav
DOI: 10.22008/fk2/jhxacv/ihaqwb
title: DK6_HIPmodels.zip

description: :unav
DOI: 10.6084/m9.figshare.26976196
title: GPCRSPACE

description: The quest for novel therapeutics targeting G protein-coupled receptors (GPCRs), essential in numerous physiological processes, is crucial in drug discovery. Despite the abundance of GPCR-targeting drugs, many receptors lack selective modulators, indicating a significant untapped therapeutic potential. To bridge this gap, we introduce GPCRSPACE, a novel GPCR-focused purchasable real chemical library developed using the G protein-coupled receptors large language models (GPCR LLM) architecture. Different from traditional machine learning models, GPCR LLM uses a positive sample machine learning strategy for training and does not need to construct any negative samples. This not only reduces false negatives but also reduces the time to label negative samples. GPCR LLM accelerates the identification and screening of potential GPCR-interactive compounds by learning the chemical space of GPCR-targeting molecules. GPCRSPACE, built on GPCR LLM, outperforms existing chemical datasets in synthesizability, structural diversity, and GPCR-likeness, making it a valuable tool for GPCR drug discovery.
DOI: 10.25413/sun.26976181
title: Evaluation of radiological capacity and usage in paediatric TB diagnosis: A mixed-method protocol of a comparative study in Mozambique, South Africa and Spain

description: Tuberculosis remains one of the top ten causes of mortality globally. Children accounted for 12% of all TB cases and 18% of all TB deaths in 2022. Paediatric TB is difficult to diagnose with conventional laboratory tests, and chest radiographs remain crucial. However, in low-and middle-income countries with high TB burden, the capacity for radiological diagnosis of paediatric TB is rarely documented and data on the associated radiation exposure limited.A multicentre, mixed-methods study is proposed in three countries, Mozambique, South Africa and Spain. At the national level, official registry databases will be utilised to retrospectively compile an inventory of licensed imaging resources (mainly X-ray and Computed Tomography (CT) scan equipment) for the year 2021. At the selected health facility level, three descriptive cross-sectional standardised surveys will be conducted to assess radiology capacity, radiological imaging diagnostic use for paediatric TB diagnosis, and radiation protection optimization: a site survey, a clinician-targeted survey, and a radiology staff-targeted survey, respectively. At the patient level, potential dose optimisation will be assessed for children under 16 years of age who were diagnosed and treated for TB in selected sites in each country. For this component, a retrospective analysis of dosimetry will be performed on TB and radiology data routinely collected at the respective sites. National inventory data will be presented as the number of units per million people by modality, region and country. Descriptive analyses will be conducted on survey data, including the demographic, clinical and programmatic characteristics of children treated for TB who had imaging examinations (chest X-ray (CXR) and/or CT scan). Dose exposure analysis will be performed by children’s age, gender and disease spectrum.As far as we know, this is the first multicentre and multi-national study to compare radiological capacity, radiation protection optimization and practices between high and low TB burden settings in the context of childhood TB management. The planned comparative analyses will inform policy-makers of existing radiological capacity and deficiencies, allowing better resource prioritisation. It will inform clinicians and radiologists on best practices and means to optimise the use of radiological technology in paediatric TB management.
DOI: 10.25413/sun.26976181.v1
title: Evaluation of radiological capacity and usage in paediatric TB diagnosis: A mixed-method protocol of a comparative study in Mozambique, South Africa and Spain

description: Tuberculosis remains one of the top ten causes of mortality globally. Children accounted for 12% of all TB cases and 18% of all TB deaths in 2022. Paediatric TB is difficult to diagnose with conventional laboratory tests, and chest radiographs remain crucial. However, in low-and middle-income countries with high TB burden, the capacity for radiological diagnosis of paediatric TB is rarely documented and data on the associated radiation exposure limited.A multicentre, mixed-methods study is proposed in three countries, Mozambique, South Africa and Spain. At the national level, official registry databases will be utilised to retrospectively compile an inventory of licensed imaging resources (mainly X-ray and Computed Tomography (CT) scan equipment) for the year 2021. At the selected health facility level, three descriptive cross-sectional standardised surveys will be conducted to assess radiology capacity, radiological imaging diagnostic use for paediatric TB diagnosis, and radiation protection optimization: a site survey, a clinician-targeted survey, and a radiology staff-targeted survey, respectively. At the patient level, potential dose optimisation will be assessed for children under 16 years of age who were diagnosed and treated for TB in selected sites in each country. For this component, a retrospective analysis of dosimetry will be performed on TB and radiology data routinely collected at the respective sites. National inventory data will be presented as the number of units per million people by modality, region and country. Descriptive analyses will be conducted on survey data, including the demographic, clinical and programmatic characteristics of children treated for TB who had imaging examinations (chest X-ray (CXR) and/or CT scan). Dose exposure analysis will be performed by children’s age, gender and disease spectrum.As far as we know, this is the first multicentre and multi-national study to compare radiological capacity, radiation protection optimization and practices between high and low TB burden settings in the context of childhood TB management. The planned comparative analyses will inform policy-makers of existing radiological capacity and deficiencies, allowing better resource prioritisation. It will inform clinicians and radiologists on best practices and means to optimise the use of radiological technology in paediatric TB management.
DOI: 10.15468/dl.c3h7ar
title: Occurrence Download

description: A dataset containing 197 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Leptopelis argenteus (Pfeffer, 1893)"
 ]
}

 The dataset includes 197 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010045-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18112/openneuro.ds005469.v1.0.1
title: Sense of agency in free and coerced moral decision-making among civilians and military personnel
DOI: 10.17630/cfa56c5c-36ef-42fe-aa3f-b06c333c14e1
title: Absolute quantum efficiency measurements of electrochemiluminescent devices through electrical impedance spectroscopy (dataset)
DOI: 10.15468/dl.qgsn2b
title: Occurrence Download

description: A dataset containing 11085172 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Material sample, Material citation, Specimen, Living Specimen, Occurrence evidence)",
 "OccurrenceStatus is Present",
 "TaxonKey is Gastropoda"
 ]
}

 The dataset includes 11085172 records from 4301 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000938-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/dans-x5b-6ejm
title: Archeologische begeleiding Winterswijk Vredenseweg (plan Vliertuin) Archeologische begeleiding aan de Vredenseweg (plan Vliertuin) te Winterswijk in de gemeente Winterswijk

description: &lt;p&gt;Tijdens het onderzoek is gebleken dat bij de aanleg van de gesloopte bebouwing een bouwkuip is aangelegd, waarbij het bodemprofiel volledig verstoord is. Buiten deze bouwkuip is nog wel sprake van een intacte bodemopbouw. Deze bodemopbouw bestaat uit een subrecent pakket van circa 1 m dik, met daaronder een akkerpakket, daterend vanaf de 18e eeuw. In de top van het akkerpakket bevindt zich een loopniveau. Onder het akkerpakket is, in het noordelijke deel van de onderzoekslocatie, een restant van een veldpodzolprofiel aanwezig. In het zuidelijke deel van de onderzoekslocatie is sprake geweest van beekeerdgronden. Het paleo-reliëf helt in zuidelijke richting.&lt;br&gt;Tijdens het onderzoek zijn geen sporen waargenomen, uitgezonderd verstoringen daterend van na de 18e eeuw. Ook is geen vondstmateriaal aangetroffen ouder dan de 18e eeuw.&lt;/p&gt;
DOI: 10.15468/dl.d4h558
title: Occurrence Download

description: A dataset containing 748734 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Aphididae"
 ]
}

 The dataset includes 748734 records from 694 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032581-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8j986d
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Distichodus microps, Distichodus mossambicus, Distichodus nefasch, Distichodus noboli, Distichodus notospilus, Distichodus petersii, Distichodus rostratus, Distichodus rufigiensis, Distichodus schenga, Distichodus sexfasciatus, Dundocharax bidentatus, Eugnathichthys eetveldii, Eugnathichthys macroterolepis, Ichthyborus besse, Ichthyborus monodi, Ichthyborus ornatus, Ichthyborus quadrilineatus, Mesoborus crocodilus, Microstomatichthyoborus bashforddeani, Microstomatichthyoborus katangae, Monostichodus elongatus, Hemistichodus lootensi, Monostichodus lootensi, Hemistichodus mesmaekersi, Monostichodus mesmaekersi, Hemistichodus vaillanti, Nannaethiops unitaeniatus, Nannocharax altus, Hemigrammocharax angolensis, Nannocharax angolensis, Nannocharax ansorgii, Nannocharax brevis, Nannocharax elongatus, Nannocharax fasciatus, Nannocharax fasciolaris, Nannocharax gracilis, Nannocharax hollyi, Nannocharax intermedius, Nannocharax latifasciatus, Nannocharax lineomaculatus, Hemigrammocharax lineostriatus, Nannocharax lineostriatus, Nannocharax luapulae, Hemigrammocharax machadoi, Nannocharax machadoi, Nannocharax macropterus, Nannocharax maculicauda, Nannocharax micros, Hemigrammocharax minutus, Nannocharax minutus, Hemigrammocharax monardi, Nannocharax monardi, Hemigrammocharax multifasciatus, Nannocharax multifasciatus, Nannocharax niloticus, Nannocharax occidentalis, Hemigrammocharax ocellicauda, Nannocharax ocellicauda, Nannocharax ogoensis, Nannocharax parvus, Nannocharax procatopus, Nannocharax pteron, Nannocharax reidi, Nannocharax rubrolabiatus, Nannocharax schoutedeni, Nannocharax seyboldi, Nannocharax taenia, Hemigrammocharax uniocellatus, Nannocharax uniocellatus, Hemigrammocharax wittei, Nannocharax wittei, Neolebias ansorgii, Neolebias axelrodi, Neolebias gossei, Neolebias gracilis, Neolebias kerguennae, Neolebias lozii, Neolebias philippei, Neolebias powelli, Neolebias spilotaenia, Neolebias trewavasae, Neolebias trilineatus, Neolebias unifasciatus, Paradistichodus dimidiatus, Paraphago rostratus, Phago boulengeri, Phago intermedius, Phago loricatus, Xenocharax crassus, Hepsetus cuvieri, Hepsetus kingsleyae, Hepsetus lineatus, Hepsetus occidentalis, Hepsetus odoe, Alosa agone, Alosa algeriensis, Alosa alosa, Alosa fallax, Congothrissa gossei, Ethmalosa fimbriata)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((55.6087 -21.8876,56.1388 -21.7124,56.3374 -21.1838,56.0195 -20.5719,55.451 -20.3718,55.1382 -20.4922,55.1382 -21.6954,55.6087 -21.8876))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032633-250827131500795/datasets/export for details.
DOI: 10.17026/dans-zue-h9s8
title: Proefsleuvenonderzoek Rhenen Achterbergsestraatweg Proefsleuvenonderzoek aan de Achterbergsestraatweg te Rhenen in de gemeente Gemeente Rhenen

description: &lt;p&gt;Tijdens het proefsleuvenonderzoek - variant archeologische begeleiding in het plangebied aan de Achterbergsestraatweg te Rhenen is één proefsleuf aangelegd met een oppervlakte van circa 150 m². De proefsleuf beslaat de westelijke helft van de te ontgraven bouwput. In de proefsleuf is deels een plaggendek aangetroffen. De oorspronkelijke bodem, van voor het opwerpen van het plaggendek, is hier aangetroffen vanaf de B-horizont. Ondanks deze goede conservering van het potentieel archeologisch bodemarchief zijn hier geen sporen en evenmin vondsten aangetroffen. Voor een deel was de bodem verstoord tot in de C-horizont, de verstoring betrof de locatie van de voormalige schuur en gierkelder in het plangebied. Door het ontbreken van vondsten is geen datering te geven voor de pe-riode waarin het plaggendek is opgeworpen.&lt;/p&gt;
DOI: 10.17026/dans-zv9-nu4q
title: Proefsleuvenonderzoek Zelhem bedrijventerrein Vinkenkamp Proefsleuvenonderzoek aan de bedrijventerrein Vinkenkamp te Zelhem in de gemeente Bronckhorst

description: &lt;p&gt;In het zuidwestelijke deel van bedrijfskavel 26A is onder het antropogeen eerddek een cultuurlaag aangetroffen, daterend uit de Middeleeuwen. In de overige delen van deze kavel bleek sprake van een natuurlijke podzolprofiel onder het dikke antropogene eerddek. Grondsporen zijn ter plaatse van deze kavel niet aangetroffen. Hier is geen sprake van een behoudenswaardige vindplaats. Ter plaatse van bedrijfskavels 28 en 29 is een erf aangetroffen daterend uit de periode 12e - 15e eeuw n. Chr. Mogelijk is tevens sprake van een prehistorische structuur. De vindplaats is behoudenswaardig.&lt;/p&gt;
DOI: 10.6084/m9.figshare.29627666
title: Additive Multi-Index Gaussian Process Modeling, with Application to Multi-Physics Surrogate Modeling of the Quark-Gluon Plasma

description: The Quark-Gluon Plasma (QGP) is a unique phase of nuclear matter, theorized to have filled the Universe shortly after the Big Bang. A critical challenge in studying the QGP is that, to reconcile experimental observables with theoretical parameters, one requires many simulation runs of a complex physics model over a high-dimensional parameter space. Each run is computationally expensive, requiring thousands of CPU hours, thus limiting physicists to only several hundred runs. Given limited training data for high-dimensional prediction, existing surrogate models often yield poor predictions with high predictive uncertainties, leading to imprecise scientific findings. To address this, we propose a new Additive Multi-Index Gaussian process (AdMIn-GP) model, which leverages a flexible additive structure on low-dimensional embeddings of the parameter space. This is guided by prior scientific knowledge that the QGP is dominated by multiple distinct physical phenomena (i.e., multi-physics), each involving a small number of latent parameters. The AdMIn-GP models for such embedded structure within a flexible Bayesian nonparametric framework, which facilitates efficient model fitting via a carefully constructed variational inference approach with inducing points. We show the effectiveness of the AdMIn-GP via a suite of numerical experiments and our QGP application, where we demonstrate considerably improved surrogate modeling performance over existing models. Supplementary materials for this article are available online, including a standardized description of the materials available for reproducing the work.