cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.np87dv
title: Occurrence Download

description: A dataset containing 683302 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Geometry POLYGON((11.36783 48.01364,11.81029 48.01364,11.81029 48.26331,11.36783 48.26331,11.36783 48.01364))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year 1950-2026"
 ]
}

 The dataset includes 683302 records from 63 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002502-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.q2bvq83h1
title: Data from: Developing extruded seed pellets to overcome soil hydrophobicity and seedling emergence barriers

description: Globally soil water repellency is a major constraint to plant
 establishment, restricting water infiltration and moisture retention in
 the seed zone, resulting in poor germination and seedling emergence. To
 address this problem within an ecosystem restoration context, we
 investigated the use of a surfactant in extruded seed pellets to improve
 native plant recruitment in water repellent topsoils of two proteaceous
 woodland species, Banksia menziesii R.Br (glasshouse trial) and Lambertia
 inermis R.Br (field trial). In this two-part study, we first examined B.
 menziesii seedling performance in detail under glasshouse conditions for
 differences in survival between the extruded pelleting formulations after
 an induced drought at 12 weeks. We demonstrated that there was no
 difference in seedling emergence, amongst control seed and pellet
 treatments in B. menziesii. Initially B. menziesii seedlings emerged
 faster in the control treatment (non-pelleted control seeds) and had
 greater initial plant growth (leaf and root production), however by week
 12, seedlings generated from pellets were not significantly different from
 the control seeds, and pellets + surfactant had the greatest number of
 leaf establishment. Survival after drought of B. menziesii seedlings
 ranged from 14 to 31 days with pellet + surfactant surviving approximately
 2.6 days (11.8%) longer than the control seeds. For the second species, L.
 inermis, seedling emergence under field conditions was approximately 24%
 greater in seedlings derived from extruded pellets, however there was no
 difference in overall survival due to post-emergence predation. This study
 provides a proof of concept that seedling emergence in water repellent
 soils can be enhanced with extruded pellets containing surfactants. Our
 demonstration under in situ and ex situ conditions confirms the
 prospective use of seed enhancement technologies with future development
 and field-testing warranted.
description: Dataset of soil water repellency (SWR) and seedling emergence
 assessments were gathered from a glasshouse study of <em>Banksia
 menziesii</em>. To determine the level of SWR in each treatment,
 three soil sampling harvests occurred post-sowing at four, eight and 12
 weeks. One additional harvest occurred at 18 weeks, 6 weeks after the
 induced drought. Emergence, number of true leaves and survival (after
 drought) were recorded every 2 d until all plants were harvested.
 Harvested leaves and roots at four, eight, 12 and 18 weeks were measured
 using an EPSON Expression 11000XL photo scanner and analysed using imaging
 software (WinRhizo software v2007, Regent Instruments Inc. Quebec City,
 Canada). Seedling emergence data was collected from <i>Lambertia
 inermis</i> seeds and pellets sown in the field.
description: Contact the lead author for further information.
DOI: 10.5061/dryad.kprr4xh2w
title: Increased epigenetic diversity and transient epigenetic memory in response to salinity stress in Thlaspi arvense

description: Epigenetic diversity could play an important role in adaptive evolution of
 organisms, especially for plant species occurring in new and stressful
 environments. Thlaspi arvense (pennycress), a valuable oilseed crop, is
 widespread in temperate regions of the northern hemisphere. In this study,
 we investigated the effect of salinity stress on the epigenetic variation
 of DNA methylation and epigenetic stress memory in pennycress using
 methylation-sensitive amplification polymorphism (MSAP) markers. We
 examined how the status of DNA methylation changes across individuals in
 response to salinity stress and whether such an effect of maternal stress
 could be transferred to offspring for one or two generations in
 non-stressed environments. Our results based on 306 epiloci indicated no
 consistent change of DNA methylation status in specific epiloci across
 individuals within the same conditions. In contrast, we found that the
 epigenetic diversity at population level increased significantly in
 response to the stimulation of salinity stress; and this “stimulation
 effect” could be transferred partially in the form of stress memory to at
 least two generations of offspring in non-stressed environments. In
 addition, we observed a parallel change in functionally important traits,
 i.e. phenotypic variation was significantly higher in plants grown under
 salinity stress compared with those of control groups. Taken together, our
 results provide novel clues for the increased spontaneous epimutation rate
 in response to stress in plants, of potential adaptive significance.
DOI: 10.5061/dryad.cjsxksn45
title: Data from: Marine regime shifts impact synchrony of deep‐sea fish growth in the Northeast Atlantic

description: The complexity and spatio–temporal scale of populations’ dynamics
 influence how populations respond to large-scale ecological pressures.
 Detecting and attributing synchrony (i.e. temporally coincident
 fluctuations in populations’ parameters) is key as synchronous populations
 can become more vulnerable to stochastic events that can affect the
 viability of harvest and have profound consequences to community
 structure. Here, we aimed to estimate the level of synchrony in fish
 growth within and among species across 1 million km2 and identify the
 environmental drivers contributing to synchronous population fluctuations.
 We developed otolith increment-based growth chronologies for two deep-sea
 scorpaenid fishes (Helicolenus dactylopterus and Pontinus kuhlii) from
 geographically and bathymetrically disjunct populations in the northeast
 Atlantic (one species in three locations; two species with different depth
 preferences). We used hierarchical models to partition variation in growth
 within and between populations attributing it to intrinsic (age, species,
 population) and extrinsic (environmental variables) drivers. We assessed
 synchrony in growth variation within and among species and identified
 common change points in population specific growth patterns. We documented
 time-variant synchrony in growth variation of geographically and
 bathymetrically segregated deep-sea fish populations, lasting 25 and 18
 years, respectively. The observed synchrony was likely driven by shared
 environmental forcing (Moran effect) as large-scale climate indices (East
 Atlantic pattern and North Atlantic Oscillation) were important
 environmental drivers of overall growth variation while the onset of
 synchrony in growth variation was likely related to marine regime shifts
 occurring in a wide area of the northeast Atlantic that affected the
 entire ecosystem. However, our capacity to extrapolate growth information
 across species and locations was dependent on the timing and magnitude of
 environmental change. Developing a better understanding of the mechanisms
 driving growth synchrony is key to ensure sustainable management of
 populations in habitats that are fragile and highly sensible to
 environmental change, such as the deep-sea.
DOI: 10.5061/dryad.66t1g1k0k
title: Ants adjust their tool use strategy in response to foraging risk

description: 1. Ants are among a few invertebrates that can use certain tools. For
 example, some ants can use debris and soil grains to transport liquid
 food. Although there has been evidence showing that ants can select the
 most efficient tools in transporting liquid food, little is known about
 their flexibility in using a specific tool under environmental pressure.
 2. Black imported fire ants, Solenopsis richteri Forel, can use sands as a
 tool for foraging. We hypothesized that S. richteri can adjust their
 strategy of tool use in response to various foraging risks. The hypothesis
 was tested by studying their sand use behavior in response to sugar water
 with different drowning risks. 3. The results support our hypothesis. S.
 richteri indeed adjusted their strategy of tool use in response to
 increased drowning risks. Due to their hydrophobic cuticle, S. richteri
 can float on water surface to forage directly with the minimal risk of
 drowning. However, when the drowning risk was elevated by reducing the
 surface tension of sugar water in a food container by the addition of
 surfactant, ants used sands to build a structure that could effectively
 function as a syphon instead of directly foraging inside the container.
 This sand structure could draw sugar water out of the container then to be
 collected by the ants, which not only reduced the drowning risk of ants,
 but also provided a larger operational space for their collection of sugar
 water. 4. This study demonstrates that ants can not only recognize the
 increase in foraging risks, but also make corresponding adjustments to
 their strategy by using a specific tool. Our results also suggest that
 social insects can be highly flexible in their tool use in response to
 ecological challenges.
DOI: 10.5061/dryad.pnvx0k6k0
title: Phylogenetic analysis of HIV-1 shows frequent cross-country transmission and local population expansions

description: Understanding of pandemics depends on characterization of pathogen
 collections from well-defined and demographically diverse cohorts. Since
 its emergence in Congo almost a century ago, HIV-1 has geographically
 spread and genetically diversified into distinct viral subtypes.
 Phylogenetic analysis can be used to reconstruct the ancestry of the virus
 to inform on the origin and distribution of subtypes. We sequenced two 3.6
 kb amplicons of HIV-1 genomes from 3,197 participants in a clinical trial
 with consistent and uniform sampling at sites across 35 countries and
 analyzed our data with another 2,632 genomes that comprehensively reflects
 the HIV-1 genetic diversity. We used maximum likelihood phylogenetic
 analysis coupled with geographical information to infer the state of
 ancestors. The majority of our sequenced genomes (n=2,501) were either
 pure subtypes (A-D, F, G) or CRF01_AE. The diversity and distribution of
 subtypes across geographical regions differed; United States showed the
 most homogenous subtype population, whereas African samples were most
 diverse. We delineated transmission of the four most prevalent subtypes in
 our dataset (A, B, C, and CRF01_AE), and our results suggest both
 continuous and frequent transmission of HIV-1 over country borders, as
 well as single transmission events being the seed of endemic population
 expansions. Overall, we show that coupling of genetic and geographical
 information of HIV-1 can be used to understand origin and spread of
 pandemic pathogens.
DOI: 10.15468/dl.z9w2c8
title: Occurrence Download

description: A dataset containing 12022 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hedychium coronarium"
 ]
}

 The dataset includes 12022 records from 428 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002540-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ns8rma
title: Occurrence Download

description: A dataset containing 128 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Erigeron argentatus",
 "Year 1958-1990"
 ]
}

 The dataset includes 128 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024810-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4gesjv
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((117.569 6.918123, 117.498226 6.912552, 117.429199 6.895975, 117.363624 6.868803, 117.303118 6.831705, 117.249174 6.785598, 117.203119 6.731619, 117.166089 6.671099, 117.13899 6.605532, 117.122489 6.536532, 117.116986 6.465799, 117.122613 6.395076, 117.139226 6.326104, 117.166413 6.26058, 117.203501 6.200115, 117.249575 6.146197, 117.3035 6.100151, 117.363949 6.063108, 117.429435 6.035979, 117.49835 6.019431, 117.569 6.013869, 117.63965 6.019431, 117.708565 6.035979, 117.774051 6.063108, 117.8345 6.100151, 117.888425 6.146197, 117.934499 6.200115, 117.971587 6.26058, 117.998774 6.326104, 118.015387 6.395076, 118.021014 6.465799, 118.015511 6.536532, 117.99901 6.605532, 117.971911 6.671099, 117.934881 6.731619, 117.888826 6.785598, 117.834882 6.831705, 117.774376 6.868803, 117.708801 6.895975, 117.639774 6.912552, 117.569 6.918123))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007936-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ku3xw3
title: Occurrence Download

description: A dataset containing 874 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alburnus alburnus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1895",
 "Year is less than or equal to 1899"
 ]
}

 The dataset includes 874 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007937-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.d6ddbf
title: Occurrence Download

description: A dataset containing 10037 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Salilota australis",
 "HasCoordinate is true",
 "DecimalLatitude is greater than -90",
 "DecimalLatitude is less than 10",
 "DecimalLongitude is greater than -180",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2015"
 ]
}

 The dataset includes 10037 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007938-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/cc6n5qq
title: CCDC 198143: Experimental Crystal Structure Determination

description: Related Article: P.C.B.Page, S.M.Allin, S.J.Maddocks, M.R.J.Elsegood|2002|J.Chem.Soc.,Perkin Trans.1||2827|doi:10.1039/b208810j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc6n5rr
title: CCDC 198144: Experimental Crystal Structure Determination

description: Related Article: P.C.B.Page, S.M.Allin, S.J.Maddocks, M.R.J.Elsegood|2002|J.Chem.Soc.,Perkin Trans.1||2827|doi:10.1039/b208810j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc6n5ss
title: CCDC 198145: Experimental Crystal Structure Determination

description: Related Article: P.C.B.Page, S.M.Allin, S.J.Maddocks, M.R.J.Elsegood|2002|J.Chem.Soc.,Perkin Trans.1||2827|doi:10.1039/b208810j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/cc6n5tt
title: CCDC 198146: Experimental Crystal Structure Determination

description: Related Article: P.C.B.Page, S.M.Allin, S.J.Maddocks, M.R.J.Elsegood|2002|J.Chem.Soc.,Perkin Trans.1||2827|doi:10.1039/b208810j
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.rru458
title: Occurrence Download

description: A dataset containing 2828 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coriandrum sativum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 2828 records from 337 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007939-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18330468
title: Total Variation Regularized GRACE and GRACE-FO RL06 solutions
DOI: 10.5281/zenodo.18330469
title: Total Variation Regularized GRACE and GRACE-FO RL06 solutions
DOI: 10.5066/p14rtqem
title: Sensor-based water-quality and stable isotopes of water data collected along the Upper Colorado River, 2020-24

description: This data release contains sensor-based water-quality and discrete stable isotopes of water data collected along the Upper Colorado River. Data collection was made by the University of Colorado at Boulder, Colorado (CO), and the U.S. Geological Survey (USGS) in Lakewood, CO. The water-quality data were collected from an inflatable raft during 5 high flow and 3 low flow sampling campaigns from June 2020 to October 2024. Discrete stable isotopes of water samples were collected every 3-5 river kilometers during the 2022-2024 sampling campaigns. Surveys were generally completed over a 480-kilometer reach of the river, from Pumphouse, CO to Potash, Utah (UT). In addition, a longer reach of the river through Cataract Canyon, UT was sampled during the June 2020 campaign, and a shorter reach of the river from Palisade, CO to Westwater Ranger Station, UT was sampled during the June-July 2021 campaign. Sensor-based water quality analytes collected during the surveys included water temperature, specific conductance, pH, nitrate as nitrogen, turbidity, and dissolved oxygen. Data files provided here include the sensor-based water-quality data as a comma-separated value (.csv) file (ucol_sensor_data.csv), and the discrete stable isotopes of water data as a .csv file (ucol_isotopes.csv).
DOI: 10.15468/dl.vjrt4f
title: Occurrence Download

description: A dataset containing 646 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Desert Locust (Schistocerca gregaria) Invasion Risk and Vegetation Damage in a Key Upsurge Area"
 ]
}

 The dataset includes 646 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007941-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jwkxgb
title: Occurrence Download

description: A dataset containing 362 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alburnus alburnus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1900",
 "Year is less than or equal to 1904"
 ]
}

 The dataset includes 362 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007943-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18354567
title: Dataset for "An Approach for Shipping Emissions Estimation in Ports: The Case of Ro–Ro Vessels in Port of Vigo"

description: Dataset for the paper: "An Approach for Shipping Emissions Estimation in Ports: The Case of Ro–Ro Vessels in Port of Vigo" (2023)
DOI: 10.5281/zenodo.18354566
title: Dataset for "An Approach for Shipping Emissions Estimation in Ports: The Case of Ro–Ro Vessels in Port of Vigo"

description: Dataset for the paper: "An Approach for Shipping Emissions Estimation in Ports: The Case of Ro–Ro Vessels in Port of Vigo" (2023)
DOI: 10.15468/dl.vhdjtg
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((116.708 7.024121, 116.63721 7.01855, 116.568168 7.001973, 116.502578 6.9748, 116.442059 6.937702, 116.388103 6.891595, 116.342039 6.837616, 116.305001 6.777096, 116.277898 6.711528, 116.261394 6.642528, 116.255891 6.571796, 116.26152 6.501074, 116.278138 6.432102, 116.305332 6.366578, 116.342428 6.306114, 116.388512 6.252197, 116.442448 6.206151, 116.502909 6.169109, 116.568408 6.141981, 116.637336 6.125432, 116.708 6.119871, 116.778664 6.125432, 116.847592 6.141981, 116.913091 6.169109, 116.973552 6.206151, 117.027488 6.252197, 117.073572 6.306114, 117.110668 6.366578, 117.137862 6.432102, 117.15448 6.501074, 117.160109 6.571796, 117.154606 6.642528, 117.138102 6.711528, 117.110999 6.777096, 117.073961 6.837616, 117.027897 6.891595, 116.973941 6.937702, 116.913422 6.9748, 116.847832 7.001973, 116.77879 7.01855, 116.708 7.024121))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 9 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007942-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14596540
title: Peer-to-Peer Boliviano (BOB) Exchange Data