cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24036918
title: NIST mAb TMPP derivatization and reaction buffer pH optimization for labeling

description: NIST mAb TMPP derivatization and reaction buffer pH optimization for labeling.
DOI: 10.6084/m9.figshare.24036918.v1
title: NIST mAb TMPP derivatization and reaction buffer pH optimization for labeling

description: NIST mAb TMPP derivatization and reaction buffer pH optimization for labeling.
DOI: 10.6084/m9.figshare.24036834
title: K562 tryptic Native (underivatized) peptides and TMPP derivatized peptides from a whole cell lysate subjected to Tandem MS with various dissociation modes

description: K562 tryptic Native (underivatized) peptides and TMPP derivatized peptides from a whole cell lysate subjected to ETD, HCD, UVPD, CID and ETD triggered CID, ETD-Triggered HCD and ETD-Triggered UVPD experiments carried out with 120 min gradient and 20 min LC gradient
DOI: 10.6084/m9.figshare.24036834.v1
title: K562 tryptic Native (underivatized) peptides and TMPP derivatized peptides from a whole cell lysate subjected to Tandem MS with various dissociation modes

description: K562 tryptic Native (underivatized) peptides and TMPP derivatized peptides from a whole cell lysate subjected to ETD, HCD, UVPD, CID and ETD triggered CID, ETD-Triggered HCD and ETD-Triggered UVPD experiments carried out with 120 min gradient and 20 min LC gradient
DOI: 10.6084/m9.figshare.24036831
title: Synthetic NIST mAb peptides derivatized with TMPP and subjected to ETD and ETD reported Triggered CID (ETD-CID)

description: Thermo RAW files of a mixture of Synthetic NIST mAb peptides derivatized with TMPP and subjected to ETD and ETD-triggered CID (ETD-CID)
DOI: 10.6084/m9.figshare.24036831.v1
title: Synthetic NIST mAb peptides derivatized with TMPP and subjected to ETD and ETD reported Triggered CID (ETD-CID)

description: Thermo RAW files of a mixture of Synthetic NIST mAb peptides derivatized with TMPP and subjected to ETD and ETD-triggered CID (ETD-CID)
DOI: 10.6084/m9.figshare.24036825
title: NIST_TMPP-Fragmentation modes

description: Thermo RAW files include Underivatized NIST mAb and TMPP derivatized NIST mAb tryptic peptide subjected to different fragmentation methods: electron transfer dissociation (ETD), High-energy collision dissociation (HCD), ETD reporter ion Triggered Collision induced dissociation (CID) : ETD-CID and ultra violet photo dissociation (UVPD)
DOI: 10.6084/m9.figshare.24036825.v1
title: NIST_TMPP-Fragmentation modes

description: Thermo RAW files include Underivatized NIST mAb and TMPP derivatized NIST mAb tryptic peptide subjected to different fragmentation methods: electron transfer dissociation (ETD), High-energy collision dissociation (HCD), ETD reporter ion Triggered Collision induced dissociation (CID) : ETD-CID and ultra violet photo dissociation (UVPD)
DOI: 10.15144/s4qp4n
title: MITgcm experiments for the study of the Antarctic slope undercurrent and onshore heat transport driven by meltwater upwelling
DOI: 10.5517/ccdc.csd.cc2gqjb2
title: CCDC 2285764: Experimental Crystal Structure Determination

description: Related Article: F.P. Malan, A.M. Mansour, A.-L.E. Manicum|2023|IUCrData|8|x230665|doi:10.1107/S241431462300665X
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.8285006
title: Gradients 5 - Hyperpro Profiles

description: This dataset was collected on the R/V Thompson during the Gradients V cruise which departed from San Diego, CA and ended in Honolulu, HI. A transect was performed on the 140 degree longitude line from roughly 16 degrees N to 4 degrees S before heading to Honolulu. The Satlantic (now Seabird) HyperPro is an in-situ free-fall profiling unit designed to measure the apparent optical properties of the ocean with concurrent measurements of temperature, salinity, chlorophyll and dissolved matter fluorescence, and optical backscattering (a proxy for total particle load). The unit is equipped with one up-looking and one down-looking hyperspectral (350-800nm) radiometer with 10 ± 0.3 nm resolution, a WET Labs ECO-Puck Triplet, and temperature, pressure, and conductivity sensors. It also incorporates a ship-mounted surface (air) hyperspectral radiometer. These data are collated from the vertical profiles. Note that lat/lon was pulled from the Station ID and may not exactly match the ship's cruise log. Time in UTC.
DOI: 10.5281/zenodo.8285005
title: Gradients 5 - Hyperpro Profiles

description: This dataset was collected on the R/V Thompson during the Gradients V cruise which departed from San Diego, CA and ended in Honolulu, HI. A transect was performed on the 140 degree longitude line from roughly 16 degrees N to 4 degrees S before heading to Honolulu. The Satlantic (now Seabird) HyperPro is an in-situ free-fall profiling unit designed to measure the apparent optical properties of the ocean with concurrent measurements of temperature, salinity, chlorophyll and dissolved matter fluorescence, and optical backscattering (a proxy for total particle load). The unit is equipped with one up-looking and one down-looking hyperspectral (350-800nm) radiometer with 10 ± 0.3 nm resolution, a WET Labs ECO-Puck Triplet, and temperature, pressure, and conductivity sensors. It also incorporates a ship-mounted surface (air) hyperspectral radiometer. These data are collated from the vertical profiles. Note that lat/lon was pulled from the Station ID and may not exactly match the ship's cruise log. Time in UTC.
DOI: 10.25919/8myj-fp88
title: Parkes observations for project P1101 semester 2023APRS_09

description: We propose to carry out fortnightly monitoring of a very active repeater, FRB~190520, with the Parkes UWL system. Our current observations show that FRB~190520 is not only the most active FRB that can be observed with Parkes, but also shows extreme rotation measure (RM) variations and unique behavior at 2 to 3 GHz frequency. This makes UWL the ideal instrument to carry out in-depth studies of this repeating FRB. With this program, we expect to detect a large sample of bursts from FRB~190520, and in collaboration with the FAST telescope, we will study the local environment, emission properties, fluence distributions, and polarisation properties over an extremely wide bandwidth with high sensitivity.
DOI: 10.5281/zenodo.8285011
title: Gradients 5 - Fluorometric Chlorophyll from CTD

description: This dataset was collected on the R/V Thompson during the Gradients V cruise which departed from San Diego, CA and ended in Honolulu, HI. A transect was performed on the 140 degree longitude line from roughly 16 degrees N to 4 degrees S before heading to Honolulu. Fluorometric Chlorophyll were collected from the R/V Thompson's CTD/Rosette system and filtered at low vacuum through a glass fiber filter. Samples were then frozen and stored in foil until analysis. Post cruise, the filters were extracted using 90% acetone for a total of 48 hours in a -20°C freezer, covered to prevent the photodegradation of pigments. Samples were then run on a Turner 10-AU Fluorometer. Data were corrected for average glass fiber filter blank values and when available is reported as the average of duplicate samples. Time in UTC.
DOI: 10.5281/zenodo.8285010
title: Gradients 5 - Fluorometric Chlorophyll from CTD

description: This dataset was collected on the R/V Thompson during the Gradients V cruise which departed from San Diego, CA and ended in Honolulu, HI. A transect was performed on the 140 degree longitude line from roughly 16 degrees N to 4 degrees S before heading to Honolulu. Fluorometric Chlorophyll were collected from the R/V Thompson's CTD/Rosette system and filtered at low vacuum through a glass fiber filter. Samples were then frozen and stored in foil until analysis. Post cruise, the filters were extracted using 90% acetone for a total of 48 hours in a -20°C freezer, covered to prevent the photodegradation of pigments. Samples were then run on a Turner 10-AU Fluorometer. Data were corrected for average glass fiber filter blank values and when available is reported as the average of duplicate samples. Time in UTC.
DOI: 10.5281/zenodo.8285017
title: Gradients 5 - Fluorometric Chlorophyll from Underway System

description: This dataset was collected on the R/V Thompson during the Gradients V cruise which departed from San Diego, CA and ended in Honolulu, HI. A transect was performed on the 140 degree longitude line from roughly 16 degrees N to 4 degrees S before heading to Honolulu. Fluorometric Chlorophyll were collected from the R/V Thompson's underway uncontaminated seawater system and filtered at low vacuum through a glass fiber filter. Samples were then frozen in liquid nitrogen and stored in foil until analysis. Post cruise, the filters were extracted using 90% acetone for a total of 48 hours in a -20°C freezer, covered to prevent the photodegradation of pigments. Samples were then run on a Turner 10-AU Fluorometer. Data were corrected for average glass fiber filter blank values and when available is reported as the average of duplicate samples. Time is in UTC.
DOI: 10.5281/zenodo.8285016
title: Gradients 5 - Fluorometric Chlorophyll from Underway System

description: This dataset was collected on the R/V Thompson during the Gradients V cruise which departed from San Diego, CA and ended in Honolulu, HI. A transect was performed on the 140 degree longitude line from roughly 16 degrees N to 4 degrees S before heading to Honolulu. Fluorometric Chlorophyll were collected from the R/V Thompson's underway uncontaminated seawater system and filtered at low vacuum through a glass fiber filter. Samples were then frozen in liquid nitrogen and stored in foil until analysis. Post cruise, the filters were extracted using 90% acetone for a total of 48 hours in a -20°C freezer, covered to prevent the photodegradation of pigments. Samples were then run on a Turner 10-AU Fluorometer. Data were corrected for average glass fiber filter blank values and when available is reported as the average of duplicate samples. Time is in UTC.
DOI: 10.18112/openneuro.ds004469.v1.1.1
title: Temporal Lobe Epilepsy - UNAM
DOI: 10.5281/zenodo.8285021
title: Gradients 5 - Hyperpro Underway

description: This dataset was collected on the R/V Thompson during the Gradients V cruise which departed from San Diego, CA and ended in Honolulu, HI. A transect was performed on the 140 degree longitude line from roughly 16 degrees N to 4 degrees S before heading to Honolulu. The Satlantic (now Seabird) HyperPro is an in-situ free-fall profiling unit designed to measure the apparent optical properties of the ocean with concurrent measurements of temperature, salinity, chlorophyll and dissolved matter fluorescence, and optical backscattering (a proxy for total particle load). The unit is equipped with one up-looking and one down-looking hyperspectral (350-800nm) radiometer with 10 ± 0.3 nm resolution, a WET Labs ECO-Puck Triplet, and temperature, pressure, and conductivity sensors. It also incorporates a ship-mounted surface (air) hyperspectral radiometer. This dataset is derived from the ship-mounted surface (air) hyperspectral radiometer. These photosynthetically active radiation - PAR(0+) - data are reported from the duration of the cruise. Time is in UTC.
DOI: 10.5281/zenodo.8285020
title: Gradients 5 - Hyperpro Underway

description: This dataset was collected on the R/V Thompson during the Gradients V cruise which departed from San Diego, CA and ended in Honolulu, HI. A transect was performed on the 140 degree longitude line from roughly 16 degrees N to 4 degrees S before heading to Honolulu. The Satlantic (now Seabird) HyperPro is an in-situ free-fall profiling unit designed to measure the apparent optical properties of the ocean with concurrent measurements of temperature, salinity, chlorophyll and dissolved matter fluorescence, and optical backscattering (a proxy for total particle load). The unit is equipped with one up-looking and one down-looking hyperspectral (350-800nm) radiometer with 10 ± 0.3 nm resolution, a WET Labs ECO-Puck Triplet, and temperature, pressure, and conductivity sensors. It also incorporates a ship-mounted surface (air) hyperspectral radiometer. This dataset is derived from the ship-mounted surface (air) hyperspectral radiometer. These photosynthetically active radiation - PAR(0+) - data are reported from the duration of the cruise. Time is in UTC.
DOI: 10.25345/c5474726c
title: MassIVE MSV000092761 - Benchmark_Photoaffinity_Probe_Site_of_Labeling
title: Benchmark experiments conducted to identify the site of labeling of photoaffinity probes on endogenous proteins directly in live cells (HEK293T). Probe names from the raw/result files are associated with the following numbers in the related manuscript (AMJ5 = Probe 2, AMJ12 = Probe 3; AMJ14 = Probe 4; AMJ22 = Probe 5; AMJ32 = Probe 6; AMJ39 = Probe 7; CP78 = Probe 8).
DOI: 10.25345/c50g3h827
title: MassIVE MSV000092762 - Benchmark_Photoaffinity_Probe_Whole_Proteins
title: Benchmark TMT-based whole protein experiments conducted to identify enriched proteins for photo-affinity probes used in the corresponding benchmark site of labeling experiments.
DOI: 10.6084/m9.figshare.23867901.v1
title: Untitled Item

description: Long-term observing data in Tibetan alpine grassland is from the experiment with nitrogen (N) and phosphorous (P) addition for seven years.
DOI: 10.34740/kaggle/dsv/6365900
title: Youtube Trending Video - Taiwan & Hong Kong
DOI: 10.5281/zenodo.8285023
title: FLOROutputs

description: This data include variables for 1000-year control experiment by the FLOR model and the PMM index.
DOI: 10.5281/zenodo.8285022
title: FLOROutputs

description: This data include variables for 1000-year control experiment by the FLOR model and the PMM index.
DOI: 10.6084/m9.figshare.23867901
title: Data from Resource co-limitation of community biomass but not structure of an alpine grassland

description: Long-term observing data in Tibetan alpine grassland is from the experiment with nitrogen (N) and phosphorous (P) addition for seven years.
DOI: 10.6084/m9.figshare.23867901.v2
title: Data from Resource co-limitation of community biomass but not structure of an alpine grassland

description: Long-term observing data in Tibetan alpine grassland is from the experiment with nitrogen (N) and phosphorous (P) addition for seven years.
DOI: 10.6084/m9.figshare.6389978.v1
title: Additional file 3: of A multi-scale analysis of bull sperm methylome revealed both species peculiarities and conserved tissue-specific features

description: is a Microsoft Excel file listing the DMRs identified using MeDIP. This file includes three datasheets corresponding to the pairwise comparisons between sperm, fibroblasts and liver. One DMR may be present in several lanes if shared by several promoters. (XLSX 821 kb)
DOI: 10.6084/m9.figshare.6389942
title: Additional file 2: of A multi-scale analysis of bull sperm methylome revealed both species peculiarities and conserved tissue-specific features

description: is a Microsoft Excel file listing the DMCs identified using RRBS. This file includes three datasheets corresponding to the pairwise comparisons between sperm, fibroblasts and monocytes. (XLSX 84756 kb)
DOI: 10.6084/m9.figshare.6389942.v1
title: Additional file 2: of A multi-scale analysis of bull sperm methylome revealed both species peculiarities and conserved tissue-specific features

description: is a Microsoft Excel file listing the DMCs identified using RRBS. This file includes three datasheets corresponding to the pairwise comparisons between sperm, fibroblasts and monocytes. (XLSX 84756 kb)
DOI: 10.6084/m9.figshare.6389891
title: Additional file 1: of Identification of genes regulating traits targeted for domestication of field cress (Lepidium campestre) as a biennial and perennial oilseed crop

description: Table S1. Genomic DNA sequences. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.6389891.v1
title: Additional file 1: of Identification of genes regulating traits targeted for domestication of field cress (Lepidium campestre) as a biennial and perennial oilseed crop

description: Table S1. Genomic DNA sequences. (XLSX 23 kb)
DOI: 10.6084/m9.figshare.6389813
title: Additional file 4 of Genomic prediction of crown rust resistance in Lolium perenne

description: Table S3. List of predicted proteins on the genomic scaffolds. Markers located on these scaffolds were associated with crown rust resistance. BLAST was done on the predicted protein sequences using PLAZA [62] to obtain the gene function. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.6389813.v1
title: Additional file 4 of Genomic prediction of crown rust resistance in Lolium perenne

description: Table S3. List of predicted proteins on the genomic scaffolds. Markers located on these scaffolds were associated with crown rust resistance. BLAST was done on the predicted protein sequences using PLAZA [62] to obtain the gene function. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.6389801
title: Additional file 3 of Genomic prediction of crown rust resistance in Lolium perenne

description: Table S2. List of genomic scaffolds where all the significant markers from genome wide association studies were located. Scaffolds were placed onto linkage group with the aid of Genome Zipper [59]. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.6389801.v1
title: Additional file 3 of Genomic prediction of crown rust resistance in Lolium perenne

description: Table S2. List of genomic scaffolds where all the significant markers from genome wide association studies were located. Scaffolds were placed onto linkage group with the aid of Genome Zipper [59]. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.6389792
title: Additional file 2 of Genomic prediction of crown rust resistance in Lolium perenne

description: Table S1. List of markers associated with crown rust resistance based on genome wide association studies in complete population and IBERS material. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.6389792.v1
title: Additional file 2 of Genomic prediction of crown rust resistance in Lolium perenne

description: Table S1. List of markers associated with crown rust resistance based on genome wide association studies in complete population and IBERS material. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.6389768
title: Additional file 6: of Stability of gene expression by primary bronchial epithelial cells over increasing passage number

description: Figure S5. Un-normalized mRNA expression of genes associated with airway epithelial basal cells, ciliogenesis, and epithelial tight junctions by primary BECs. Un-normalized mRNA Ct values for TP63 (A.), KRT5 (B.), TUBB4A (C.), TPJ1 (D.), FOXJ1 (E.), and OCLN (F.) by BECs at P1 (n = 6 asthma donors, n = 6 healthy donors), P2 (n = 6 asthma donors, n = 6 healthy donors), P3 (n = 4 asthma donors, n = 6 healthy donors), P4 (n = 6 asthma donors, n = 6 healthy donors), and P5 (n = 6 asthma donors, n = 6 healthy donors) are presented as individual data points for each donor cell line. To compare expression of genes at P2-P5 to expression at P1, and to compare patterns of gene expression between asthmatic and healthy donors, ordinary two-way ANOVA with Dunnett’s multiple comparisons test was used for normally distributed data, and Kruskal-Wallis ANOVA with Dunn’s multiple comparisons test was used for non-normally distributed data. (EMF 224 kb)
DOI: 10.6084/m9.figshare.6389768.v1
title: Additional file 6: of Stability of gene expression by primary bronchial epithelial cells over increasing passage number

description: Figure S5. Un-normalized mRNA expression of genes associated with airway epithelial basal cells, ciliogenesis, and epithelial tight junctions by primary BECs. Un-normalized mRNA Ct values for TP63 (A.), KRT5 (B.), TUBB4A (C.), TPJ1 (D.), FOXJ1 (E.), and OCLN (F.) by BECs at P1 (n = 6 asthma donors, n = 6 healthy donors), P2 (n = 6 asthma donors, n = 6 healthy donors), P3 (n = 4 asthma donors, n = 6 healthy donors), P4 (n = 6 asthma donors, n = 6 healthy donors), and P5 (n = 6 asthma donors, n = 6 healthy donors) are presented as individual data points for each donor cell line. To compare expression of genes at P2-P5 to expression at P1, and to compare patterns of gene expression between asthmatic and healthy donors, ordinary two-way ANOVA with Dunnett’s multiple comparisons test was used for normally distributed data, and Kruskal-Wallis ANOVA with Dunn’s multiple comparisons test was used for non-normally distributed data. (EMF 224 kb)
DOI: 10.6084/m9.figshare.6389741
title: Additional file 5: of Stability of gene expression by primary bronchial epithelial cells over increasing passage number

description: Figure S4. Un-normalized mRNA expression of innate immunity and immunomodulatory genes by primary BECs. Un-normalized mRNA Ct values for CXCL10 (A.), IFIH1 (B.), IL-33 (C.), and TSLP (D.) by BECs at P1 (n = 6 asthma donors, n = 6 healthy donors), P2 (n = 6 asthma donors, n = 6 healthy donors), P3 (n = 4 asthma donors, n = 6 healthy donors), P4 (n = 6 asthma donors, n = 6 healthy donors), and P5 (n = 6 asthma donors, n = 6 healthy donors) are presented as individual data points for each donor cell line. To compare expression of genes at P2-P5 to expression at P1, and to compare patterns of gene expression between asthmatic and healthy donors, ordinary two-way ANOVA with Dunnett’s multiple comparisons test was used for normally distributed data, and Kruskal-Wallis ANOVA with Dunn’s multiple comparisons test was used for non-normally distributed data. (EMF 155 kb)
DOI: 10.6084/m9.figshare.6389741.v1
title: Additional file 5: of Stability of gene expression by primary bronchial epithelial cells over increasing passage number

description: Figure S4. Un-normalized mRNA expression of innate immunity and immunomodulatory genes by primary BECs. Un-normalized mRNA Ct values for CXCL10 (A.), IFIH1 (B.), IL-33 (C.), and TSLP (D.) by BECs at P1 (n = 6 asthma donors, n = 6 healthy donors), P2 (n = 6 asthma donors, n = 6 healthy donors), P3 (n = 4 asthma donors, n = 6 healthy donors), P4 (n = 6 asthma donors, n = 6 healthy donors), and P5 (n = 6 asthma donors, n = 6 healthy donors) are presented as individual data points for each donor cell line. To compare expression of genes at P2-P5 to expression at P1, and to compare patterns of gene expression between asthmatic and healthy donors, ordinary two-way ANOVA with Dunnett’s multiple comparisons test was used for normally distributed data, and Kruskal-Wallis ANOVA with Dunn’s multiple comparisons test was used for non-normally distributed data. (EMF 155 kb)
DOI: 10.6084/m9.figshare.6389735
title: Additional file 4: of Stability of gene expression by primary bronchial epithelial cells over increasing passage number

description: Figure S3. Un-normalized mRNA expression of genes related to airway remodeling by primary BECs. Un-normalized mRNA Ct values for TGFβ1 (A.), TGFβ2 (B.), MUC5AC (C.), activin A (D.), and FSTL3 (E.) by BECs at P1 (n = 6 asthma donors, n = 6 healthy donors), P2 (n = 6 asthma donors, n = 6 healthy donors), P3 (n = 4 asthma donors, n = 6 healthy donors), P4 (n = 6 asthma donors, n = 6 healthy donors), and P5 (n = 6 asthma donors, n = 6 healthy donors) are presented as individual data points for each donor cell line. To compare expression of genes at P2-P5 to expression at P1, and to compare patterns of gene expression between asthmatic and healthy donors, ordinary two-way ANOVA with Dunnett’s multiple comparisons test was used for normally distributed data, and Kruskal-Wallis ANOVA with Dunn’s multiple comparisons test was used for non-normally distributed data. (EMF 195 kb)