cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14362899
title: MusicUGC-NER

description: This dataset contains user-generated content (UGC) containing music entities (work of arts and performing artists). The datasources of this dataset are Reddit and YouTube.

The datasets consist each of a k-fold split (provided in .IOB, following the IOB format. Furthermore, we include the metadata of items in the respective data.jsonl files. All datasets can be found in data/dataset. We provide the following datasets:



reddit+shsyt: The full MusicUGC-NER dataset. It contains annotations by us (YouTube) and by researchers from Deezer (Reddit). Please see citation information below and in the corresponding repository.

shsyt: The YouTube-only subset.

shs100k2: The automatically matched data based on versions in SHS100K2. While this dataset is rather big, the data quality is much less than the two other datasets, since it was not curated by humans and we observed a rather low recall (please refer to our conference paper for details).
DOI: 10.15468/dl.n5papp
title: Occurrence Download

description: A dataset containing 3543 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (Argentina, Chile)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Pluvianellus socialis G.R.Gray, 1846"
 ]
}

 The dataset includes 3543 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030044-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2pnvdd
title: Occurrence Download

description: A dataset containing 68 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Spodoptera litura (Fabricius, 1775)",
 "Year 2000-2024"
 ]
}

 The dataset includes 68 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030046-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cvpeqq
title: Occurrence Download

description: A dataset containing 98 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Occurrence evidence, Human Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Benincasa hispida (Thunb.) Cogn."
 ]
}

 The dataset includes 98 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030045-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y6fy6v
title: Occurrence Download

description: A dataset containing 700 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Terminalia bellirica (Gaertn.) Roxb."
 ]
}

 The dataset includes 700 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030047-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28007885
title: MGIA_results

description: This dataset was generated with direct-to-PBMC Mtb killing assays using Bactec MGIT, in 3 groups of 20 samples. The aim was to compare the outcomes between COVID+ groups and COVID- groups.
DOI: 10.5281/zenodo.14381293
title: Chondrocytes differentiation-dedifferentiation proteomics

description: Pairwise group comparison results (LIMMA), GO enrichment analysis (pathways), Raw spectra (DDA), Processed data (Skyline)
DOI: 10.5281/zenodo.14381294
title: Chondrocytes differentiation-dedifferentiation proteomics

description: Pairwise group comparison results (LIMMA), GO enrichment analysis (pathways), Raw spectra (DDA), Processed data (Skyline)
DOI: 10.6084/m9.figshare.28006379.v1
title: Supplementary materials for Chalcophile elements in post-subduction magmas and implications for long-term metal recycling in oceanic and continental subduction

description: The supplementary material comprises a Word file (Supplementary material A) providing more detailed description of studied samples and analytical methods as well as the modelling calculations, an Excel file (Supplementary Table 1-4) including all research data, and 7 supplementary figures (Fig. S1-7).
DOI: 10.60893/figshare.pof.27883365
title: Supplementary Material

description: Supplementary Material
DOI: 10.15468/dl.cv9vga
title: Occurrence Download

description: A dataset containing 18150393 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves"
 ]
}

 The dataset includes 18150393 records from 246 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030027-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cy93va
title: Occurrence Download

description: A dataset containing 78 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Argentina",
 "OccurrenceStatus is Present",
 "TaxonKey is Mimosa brevipetiolata Burkart"
 ]
}

 The dataset includes 78 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030049-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cat762
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((115 34,122 34,122 38,115 38,115 34))",
 "Month is one of (January, February, March, April, May, June, July, August, September, October, November, December)",
 "TaxonKey is Spodoptera Guenée, 1852",
 {
 "or" : [
 "Year 2000-2023",
 "Year 2000-2023"
 ]
 }
 ]
}

 The dataset includes 73 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030053-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y5hafv
title: Occurrence Download

description: A dataset containing 578 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Angelica dahurica (Hoffm.) Benth. & Hook.fil. ex Franch. & Sav."
 ]
}

 The dataset includes 578 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030052-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2wffpz
title: Occurrence Download

description: A dataset containing 1880 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Atractylodes lancea (Thunb.) DC."
 ]
}

 The dataset includes 1880 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030055-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.abs867
title: Occurrence Download

description: A dataset containing 21567 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Helictochloa versicolor (Vill.) Romero Zarco, Avena scheuchzeri subsp. pretuniana Arc., Avena versicolor Vill., Avena versicolor var. villarsiana St.-Yves, Avenastrum versicolor (Vill.) Fritsch, Avenochloa pretutiana (Arcang.) Holub, Avenochloa versicolor (Vill.) Holub, Avenula scheuchzeri Dumort. ex E.Salisb., 1947, Avenula versicolor (Vill.) M.Laínz, Avenula versicolor subsp. versicolor, Danthorhiza versicolor (Vill.) Ten., Helictotrichon versicolor (Vill.) Pilg., Helictotrichon versicolor (Vill.) Schult. & Schult.f.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1900",
 "Year is less than or equal to 2024",
 "Month is greater than or equal to January",
 "Month is less than or equal to September"
 ]
}

 The dataset includes 21567 records from 130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030054-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25345/c5dv1d114
title: MassIVE MSV000096636 - Comprehensive Metabolomic Profiling of Osteoarthritis Unraveling Sexually Dimorphic Patterns
title: Osteoarthritis (OA) is a chronic disease characterized by high morbidity, affecting multiple body systems and associated with systemic metabolic disorders. The clinical features of OA exhibit significant sexual dimorphism. However, the specific metabolic characteristics underlying this difference remain incompletely understood, with a notable lack of molecular risk factors related to OA. In this study, we established a cohort of 60 OA cases comprising different genders. Employing liquid chromatography-tandem mass spectrometry (LC-MS/MS), we performed untargeted metabolomic analyses on synovial membrane, synovial fluid, urine, and serum samples, obtained simultaneously from each patient. Following rigorous quality control, we successfully constructed and annotated a metabolic profile of OA encompassing multiple sample types. Moreover, we identified metabolites associated with clinical risk factors and delineated a sex-specific subset of metabolites based on sample type. This dataset provides a foundation for further investigation into the impact of sex on OA at metabolic level. Additionally, these findings are expected to enhance the study of potential sex-related biomarkers in OA and offer novel insights into clinical gender-specific management strategies.
DOI: 10.15468/dl.ct5yyu
title: Occurrence Download

description: A dataset containing 370 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Occurrence evidence",
 "Continent is Africa",
 "Country is Madagascar",
 "OccurrenceStatus is Present",
 "TaxonKey is Coffea L."
 ]
}

 The dataset includes 370 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030056-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5v8zx5
title: Occurrence Download

description: A dataset containing 12383 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is North America",
 "Country is Mexico",
 "TaxonKey is Salticidae"
 ]
}

 The dataset includes 12383 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030058-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fy46jt
title: Occurrence Download

description: A dataset containing 21115 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Helictochloa versicolor (Vill.) Romero Zarco, Avena scheuchzeri subsp. pretuniana Arc., Avena versicolor Vill., Avena versicolor var. villarsiana St.-Yves, Avenastrum versicolor (Vill.) Fritsch, Avenochloa pretutiana (Arcang.) Holub, Avenochloa versicolor (Vill.) Holub, Avenula scheuchzeri Dumort. ex E.Salisb., 1947, Avenula versicolor (Vill.) M.Laínz, Avenula versicolor subsp. versicolor, Danthorhiza versicolor (Vill.) Ten., Helictotrichon versicolor (Vill.) Pilg., Helictotrichon versicolor (Vill.) Schult. & Schult.f.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1900",
 "Year is less than or equal to 2024",
 "Month is greater than or equal to January",
 "Month is less than or equal to September"
 ]
}

 The dataset includes 21115 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030057-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fbhfz7
title: Occurrence Download

description: A dataset containing 83 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Rheum palmatum L."
 ]
}

 The dataset includes 83 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030060-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60656/418ceddface44d71
title: Custom collection of classification data from Granada on 3 Dec 2024
DOI: 10.15468/dl.cjmj4r
title: Occurrence Download

description: A dataset containing 1754 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Coix lacryma-jobi L."
 ]
}

 The dataset includes 1754 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030061-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/szixch
title: Coleção de Ictiofauna do Museu de Ciências Univates

description: A coleção ictiológica do Museu de Ciências Naturais da Universidade do Vale do Taquari - Univates é composta por espécies nativas da Bacia hidrográfica Taquari-Antas, região central do estado do Rio Grande do Sul, Brasil. Atualmente a coleção é constituída por mais de 13 mil espécimes, distribuídos em 23 famílias, 49 gêneros e 65 espécies.
DOI: 10.6084/m9.figshare.26366962
title: Thermal sensitivity of respiration and ROS emission of muscle mitochondria in deer mice

description: We examined thermal effects on mitochondrial function in deer mice (<i>Peromyscus maniculatus</i>). Mitochondrial respiration and ROS emission was measured at 37, 40, and 42°C using both permeabilized fibres and isolated mitochondria from the gastrocnemius muscle. See associated publication for additional details on data and experimental design.
DOI: 10.6084/m9.figshare.26366962.v1
title: Thermal sensitivity of muscle mitochondria may underlie effects of hot temperatures on running performance in deer mice

description: We examined thermal effects on mitochondrial function in deer mice (<i>Peromyscus maniculatus</i>). Mitochondrial respiration and ROS emission was measured at 37, 40, and 42°C using both permeabilized fibres and isolated mitochondria from the gastrocnemius muscle. See associated publication for additional details on data and experimental design.
DOI: 10.15468/dl.23jda3
title: Occurrence Download

description: A dataset containing 752 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Forsythia suspensa (Thunb.) Vahl"
 ]
}

 The dataset includes 752 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030062-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wmba3x
title: Occurrence Download

description: A dataset containing 3015 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Lilium lancifolium Thunb."
 ]
}

 The dataset includes 3015 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030063-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.esxmqg
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is one of (EOD – eBird Observation Dataset, iNaturalist Research-grade Observations, BirdMap Data - GPS tracking of Storks, Cranes and birds of prey, breeding in Northern and Eastern Europe)",
 "GadmGid is EGY.25_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Mammalia",
 "Year 2010-2024"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030067-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qbbyg8
title: Occurrence Download

description: A dataset containing 1728 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Ophiopogon japonicus (Thunb.) Ker Gawl."
 ]
}

 The dataset includes 1728 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030068-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t7njh7
title: Occurrence Download

description: A dataset containing 44013 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Virtual Herbarium ALTB (South-Siberian Botanical Garden)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 44013 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030069-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3wn6v8
title: Occurrence Download

description: A dataset containing 4367 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Lonchophylla mordax Thomas, 1903, Vampyressa pusilla (Wagner, 1843), Micronycteris homezi Pirlot, 1967, Micronycteris matses Simmons, Voss & Fleck, 2002, Micronycteris giovanniae Baker & Fonseca, 2007, Mimon bennettii (Gray, 1838), Lonchophylla chocoana Dávalos, 2004, Lonchophylla dekeyseri Taddei, Vizotto & Sazima, 1983, Sturnira perla Jarrín-Valladares & Kunz, 2011, Chiroderma improvisum Baker & Genoways, 1976, Artibeus intermedius Allen, 1897)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 4367 records from 103 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030071-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b2ghs6
title: Occurrence Download

description: A dataset containing 97539 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Vitis vinifera L."
 ]
}

 The dataset includes 97539 records from 643 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030065-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive106423.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive106424.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0098252.10fu
title: SH0098252.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.13145/bacdive106424.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive106425.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive106425.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive106426.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.