cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25549/independent-c69-34236
title: Claims (GX 14234 - GX 14635), 1987

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1987. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.15468/dl.bb3fgd
title: Occurrence Download

description: A dataset containing 17735 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "GadmGid is ESP.1.2_1",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 17735 records from 77 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051421-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-34286
title: Claims (GX 14234 - GX 14635), 1987

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1987. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.15468/dl.r5zym2
title: Occurrence Download

description: A dataset containing 277104 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Allium",
 "HasCoordinate is true",
 {
 "or" : [
 "Geometry POLYGON((-10.546875 81.308320,63.28125 82.308892,132.890625 81.723187,213.75 81.413933,215.156249 47.989921,230.624999 -41.508577,160.3125 -11.178401,146.953124 -2.811371,139.921875 -2.108898,112.5 -5.615985,83.671875 -47.517200,78.046875 -33.724339,-24.609375 -52.482780,-29.53125 78.903929,-10.546875 81.308320))",
 "Geometry POLYGON((-165.234375 77.466028,-170.15625 36.597889,-169.453124 -30.145127,-158.203125 -60.930432,-70.3125 -61.606396,-53.4375 -65.658274,-21.796875 -67.609220,-23.203125 -4.214943,-26.71875 66.513260,-52.734375 76.679784,-165.234375 77.466028))"
 ]
 },
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 277104 records from 601 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002268-170627171947987/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-40037
title: Claims (GX 13774 - GX 14233), 1987

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1987. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.15468/dl.55jgzx
title: Occurrence Download

description: A dataset containing 15462 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Helianthus annuus L.",
 "Country is one of (United States of America, Canada)",
 "Year is greater than or equal to 1979"
 ]
}

 The dataset includes 15462 records from 171 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008265-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-40027
title: Claims (GX 13774 - GX 14233), 1987

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1987. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.15468/dl.u6obru
title: Occurrence Download

description: A dataset containing 24349 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vulpia bromoides (L.) Gray"
 ]
}

 The dataset includes 24349 records from 276 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002268-170714134226665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-34267
title: Claims (GX 14234 - GX 14635), 1987

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1987. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.15468/dl.ukbbkv
title: Occurrence Download

description: A dataset listing the 5803 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Specimen)",
 "GadmGid is ESP.1.1_1",
 "OccurrenceStatus is Present",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset's 5803 records were derived from 100 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005608-230918134249559/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6hnzrp
title: Occurrence Download

description: A dataset containing 6073 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pteronotus personatus (Wagner, 1843)"
 ]
}

 The dataset includes 6073 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002268-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-40056
title: Claims (GX 13774 - GX 14233), 1987

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1987. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.15468/dl.zdg4zg
title: Occurrence Download

description: A dataset containing 4250 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Occurrence evidence)",
 "Country is Chile",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Hippocamelus bisulcus (Molina, 1782)"
 ]
}

 The dataset includes 4250 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008262-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-34256
title: Claims (GX 14234 - GX 14635), 1987

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1987. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.15468/dl.oymzwb
title: Occurrence Download

description: A dataset containing 12 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Inventaire des oiseaux nicheurs de France métropolitaine 2009-2012 - Oiseaux nicheurs de France métropolitaine 2009-2012 - Nidification possible",
 "TaxonKey is Leiothrix lutea (Scopoli, 1786)"
 ]
}

 The dataset includes 12 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002268-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-42552
title: Claims (GX 14638 - GX 15135), 1988

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1988. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.15468/dl.c5qgeg
title: Occurrence Download

description: A dataset containing 54 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dasyprocta prymnolopha Wagler, 1831"
 ]
}

 The dataset includes 54 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0051472-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8d7tud
title: Occurrence Download

description: A dataset containing 39967 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is one of (Crepis tectorum L.)"
 ]
}

 The dataset includes 39967 records from 334 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001428-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17287848
title: Data behind: "Reconstructing and resampling: a guide to utilising posterior samples from gravitational wave observations"

description: This contains the scripts and data sets to reproduce figures from "Reconstructing and resampling: a guide to utilising posterior samples fromgravitational wave observations". There is an attached tar file which contains the Python scripts and notebooks. There is also a standalone Python script.
DOI: 10.5281/zenodo.17287904
title: EMG2Qwerty - BIDS-EMG Dataset

description: EMG2Qwerty: Touch typing from sEMG
DOI: 10.15468/dl.m36edd
title: Occurrence Download

description: A dataset containing 4688951 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Observations du Conservatoire botanique national du Bassin parisien."
 ]
}

 The dataset includes 4688951 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018376-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jtrhu3
title: Occurrence Download

description: A dataset containing 126940 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Colombia",
 "DatasetKey is one of (Herbario Nacional Colombiano (COL), Herbario Universidad de Caldas - FAUC, Herbario Jardín Botánico de Cartagena \"Guillermo Piñeres\", Herbario CDMB - Jardín Botánico Eloy Valenzuela, Colección general del plantas vasculares del Herbario JBB, Herbario de la Universidad Pedagógica y Tecnológica de Colombia, Royal Botanic Gardens, Kew - Herbarium Specimens, Flora del Nororiente Colombiano: Colecciones del Herbario Regional Catatumbo Sarare)",
 "Geometry POLYGON((-129.74253 -45.54261,152.49749 -45.54261,152.49749 51.97748,-129.74253 51.97748,-129.74253 -45.54261))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "License is CC-BY 4.0",
 "OccurrenceStatus is Present",
 "TaxonKey is Magnoliopsida"
 ]
}

 The dataset includes 126940 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007294-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13023/2024.alum.180
title: Table B: Generally Recognized as Safe (GRAS) Food Additives Containing Aluminum
DOI: 10.15468/dl.48f735
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Italy",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Viola aethnensis Parl.",
 "Year 1960-2025"
 ]
}

 The dataset includes 103 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007246-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13023/2024.alum.181
title: Table C: Some Other FDA-Approved Sources of Aluminum in Food
DOI: 10.15468/dl.h5kdbz
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-105.78103631065986 20.384785057716254,-105.67117302940986 20.384785057716254,-105.67117302940986 20.494648338966254,-105.78103631065986 20.494648338966254,-105.78103631065986 20.384785057716254))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Obelia Péron & Lesueur, 1810"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007247-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13023/2024.alum.183
title: Table D: Aluminum-Containing Additives Allowed by the EU and FAO/WHO
DOI: 10.13023/2024.alum.184
title: Table E: Aluminum Lakes of Permitted Colors Allowed by the European Union
DOI: 10.15468/dl.sp4b8s
title: Occurrence Download

description: A dataset containing 87883 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "OccurrenceStatus is Present",
 "TaxonKey is Cynanthus latirostris Swainson, 1827",
 "Year 2010-2024"
 ]
}

 The dataset includes 87883 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007291-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14943831
title: ATAC-seq count data from primary pediatric AML samples

description: ATAC-seq Data from Primary Pediatric AML Samples

Data Source

Primary pediatric AML patient ATAC-seq data were obtained from the St. Anna Children's Cancer Research Institute (CCRI).

Bioinformatic Processing

A modified version of the ATAC-seq Data Processing Pipeline (Reichl, S. et al. Ultimate ATAC-seq Data Processing & Quantification Pipeline. (2024)) was applied to the raw BAM files, accessible at: https://github.com/epigen/atacseq_pipeline.

The pipeline utilized fastp (Chen, S., Zhou, Y., Chen, Y. & Gu, J. fastp: an ultra-fast all-in-one FASTQ preprocessor. Bioinformatics 34, i884–i890 (2018)) for adapter removal and Bowtie2 (Langmead, B. & Salzberg, S. L. Fast gapped-read alignment with Bowtie 2. Nat. Methods 9, 357–359 (2012)) for read alignment to the GRCh38 (hg38) human reference genome.

Duplicate marking was performed with samblaster (Faust, G. G. & Hall, I. M. SAMBLASTER: fast duplicate marking and structural variant read extraction. Bioinformatics 30, 2503–2505 (2014)). The aligned BAM files were sorted, indexed, and filtered for ENCODE blacklisted regions using samtools (Li, H. et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics 25, 2078–2079 (2009)).

Counts over exons were obtained using featureCounts (Liao, Y., Smyth, G. K. & Shi, W. featureCounts: an efficient general-purpose program for assigning sequence reads to genomic features. Bioinformatics 30, 923–930 (2014)).

Data Structure

The table contains the following columns:




Column Name
Description




NCBI_id
RefSeq (NCBI Reference Sequence) accession number for a specific mRNA transcript


Gene_symbol
Official gene symbol


ENTREZ_id
Entrez Gene ID


Sample00_NUP98_NSD1
Read counts per gene for this sample


Sample04_NK
Read counts per gene for this sample


Sample08_NUP98_KDM5A
Read counts per gene for this sample


Sample13_NUP98_KDM5A
Read counts per gene for this sample


Sample17_NUP98_NSD1
Read counts per gene for this sample


Sample19_CBFB_MYH11
Read counts per gene for this sample


Sample21_CBFB_MYH11
Read counts per gene for this sample


Sample22_NUP98_KDM5A
Read counts per gene for this sample


Sample23_NUP98_KDM5A
Read counts per gene for this sample


Sample31_KMT2A_MLLT3
Read counts per gene for this sample


Sample33_CBFA2T3_GLIS2
Read counts per gene for this sample


Sample38_KMT2A_MLLT3
Read counts per gene for this sample


Sample39_NK
Read counts per gene for this sample


Sample44_NUP98_NSD1
Read counts per gene for this sample


Sample45_NUP98_NSD1
Read counts per gene for this sample
DOI: 10.5281/zenodo.14943832
title: ATAC-seq count data from primary pediatric AML samples

description: ATAC-seq Data from Primary Pediatric AML Samples

Data Source

Primary pediatric AML patient ATAC-seq data were obtained from the St. Anna Children's Cancer Research Institute (CCRI).

Bioinformatic Processing

A modified version of the ATAC-seq Data Processing Pipeline (Reichl, S. et al. Ultimate ATAC-seq Data Processing & Quantification Pipeline. (2024)) was applied to the raw BAM files, accessible at: https://github.com/epigen/atacseq_pipeline.

The pipeline utilized fastp (Chen, S., Zhou, Y., Chen, Y. & Gu, J. fastp: an ultra-fast all-in-one FASTQ preprocessor. Bioinformatics 34, i884–i890 (2018)) for adapter removal and Bowtie2 (Langmead, B. & Salzberg, S. L. Fast gapped-read alignment with Bowtie 2. Nat. Methods 9, 357–359 (2012)) for read alignment to the GRCh38 (hg38) human reference genome.

Duplicate marking was performed with samblaster (Faust, G. G. & Hall, I. M. SAMBLASTER: fast duplicate marking and structural variant read extraction. Bioinformatics 30, 2503–2505 (2014)). The aligned BAM files were sorted, indexed, and filtered for ENCODE blacklisted regions using samtools (Li, H. et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics 25, 2078–2079 (2009)).

Counts over exons were obtained using featureCounts (Liao, Y., Smyth, G. K. & Shi, W. featureCounts: an efficient general-purpose program for assigning sequence reads to genomic features. Bioinformatics 30, 923–930 (2014)).

Data Structure

The table contains the following columns:




Column Name
Description




NCBI_id
RefSeq (NCBI Reference Sequence) accession number for a specific mRNA transcript


Gene_symbol
Official gene symbol


ENTREZ_id
Entrez Gene ID


Sample00_NUP98_NSD1
Read counts per gene for this sample


Sample04_NK
Read counts per gene for this sample


Sample08_NUP98_KDM5A
Read counts per gene for this sample


Sample13_NUP98_KDM5A
Read counts per gene for this sample


Sample17_NUP98_NSD1
Read counts per gene for this sample


Sample19_CBFB_MYH11
Read counts per gene for this sample


Sample21_CBFB_MYH11
Read counts per gene for this sample


Sample22_NUP98_KDM5A
Read counts per gene for this sample


Sample23_NUP98_KDM5A
Read counts per gene for this sample


Sample31_KMT2A_MLLT3
Read counts per gene for this sample


Sample33_CBFA2T3_GLIS2
Read counts per gene for this sample


Sample38_KMT2A_MLLT3
Read counts per gene for this sample


Sample39_NK
Read counts per gene for this sample


Sample44_NUP98_NSD1
Read counts per gene for this sample


Sample45_NUP98_NSD1
Read counts per gene for this sample
DOI: 10.15468/dl.yrgd27
title: Occurrence Download

description: A dataset containing 578099 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Swedish National Forest Inventory: Presence-absence vegetation data (1995-current)",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 578099 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007245-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7dj26x
title: Occurrence Download

description: A dataset containing 11907 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-162.53128 -30.14823,10.53128 -30.14823,10.53128 39.14823,-162.53128 39.14823,-162.53128 -30.14823))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Meccus Stål, 1859"
 ]
}

 The dataset includes 11907 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0007297-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.