cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.wpjxwc
title: Occurrence Download

description: A dataset containing 21 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Philodendron simmondsii Mayo"
 ]
}

 The dataset includes 21 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0187549-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wyvsi2
title: Occurrence Download

description: A dataset containing 3819 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Fraxinus americana L."
 ]
}

 The dataset includes 3819 records from 141 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001140-170822121629195/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7x69cn
title: Occurrence Download

description: A dataset containing 4863 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Caperonia cubana Pax & K.Hoffm., Caperonia palustris (L.) A.St.-Hil., Chiropetalum tricoccum (Vell.) Chodat & Hassl., Ditaxis argothamnoides (Bertol. ex Spreng.) Radcl.-Sm. & Govaerts, Ditaxis guatemalensis (Müll.Arg.) Pax & K.Hoffm., Ditaxis lanceolata (Benth.) Pax & K.Hoffm., Ditaxis manzanilloana (Rose) Pax & K.Hoffm., Ditaxis montevidensis (Didr.) Pax, Ditaxis pringlei (Greenm.) Pax & K.Hoffm., Philyra brasiliensis Klotzsch)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 }
 ]
}

 The dataset includes 4863 records from 232 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0167439-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9ded4l
title: Occurrence Download

description: A dataset containing 635 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Harpagifer antarcticus Nybelin, 1947"
 ]
}

 The dataset includes 635 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0029459-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.preswa
title: Occurrence Download

description: A dataset containing 3008 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Murray-Darling Basin waterbird survey"
 ]
}

 The dataset includes 3008 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001140-171219132708484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.upxsy9
title: Occurrence Download

description: A dataset containing 5841 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Thalia geniculata L."
 ]
}

 The dataset includes 5841 records from 313 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009734-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.gdfmva
title: Occurrence Download

description: A dataset containing 635 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "OccurrenceStatus is Present",
 "TaxonKey is Rhacophorus malabaricus Jerdon, 1870",
 "Year 2005-2025"
 ]
}

 The dataset includes 635 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022848-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17779317
title: SIDEKICK: A Semantically Integrated Resource for Drug Effects, Indications, and Contraindications

description: Pharmacovigilance and clinical decision support systems utilize structured drug safety data to guide medical practice. However, existing datasets frequently depend on legacy terminologies, such as MedDRA, which limit the semantic reasoning capabilities and the interoperability required for modern computational phenotyping. To address this gap, we developed SIDEKICK, a knowledge graph that standardizes drug indications, contraindications, and adverse reactions from FDA Structured Product Labels. We developed and used a workflow based on Large Language Model (LLM) extraction and Graph-Retrieval Augmented Generation (Graph RAG) for ontology mapping. We processed over 50,000 labels and mapped terms to the Human Phenotype Ontology (HPO), MONDO Disease Ontology, and RxNorm. Our semantically integrated resource outperforms the SIDER and ONSIDES baselines databases when applied to the task of drug repurposing by side effects. We serialized the dataset as a Resource Description Framework (RDF) graph and employed the Semanticscience Integrated Ontology (SIO) as upper level ontology to further improve interoperability. Consequently, SIDEKICK enables automated safety surveillance and phenotype-based similarity analysis for drug repurposing.
DOI: 10.5281/zenodo.17779316
title: SIDEKICK: A Semantically Integrated Resource for Drug Effects, Indications, and Contraindications

description: Pharmacovigilance and clinical decision support systems utilize structured drug safety data to guide medical practice. However, existing datasets frequently depend on legacy terminologies, such as MedDRA, which limit the semantic reasoning capabilities and the interoperability required for modern computational phenotyping. To address this gap, we developed SIDEKICK, a knowledge graph that standardizes drug indications, contraindications, and adverse reactions from FDA Structured Product Labels. We developed and used a workflow based on Large Language Model (LLM) extraction and Graph-Retrieval Augmented Generation (Graph RAG) for ontology mapping. We processed over 50,000 labels and mapped terms to the Human Phenotype Ontology (HPO), MONDO Disease Ontology, and RxNorm. Our semantically integrated resource outperforms the SIDER and ONSIDES baselines databases when applied to the task of drug repurposing by side effects. We serialized the dataset as a Resource Description Framework (RDF) graph and employed the Semanticscience Integrated Ontology (SIO) as upper level ontology to further improve interoperability. Consequently, SIDEKICK enables automated safety surveillance and phenotype-based similarity analysis for drug repurposing.
DOI: 10.15468/dl.9swsxv
title: Occurrence Download

description: A dataset containing 33354 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "Month is July",
 "OccurrenceStatus is Present",
 "TaxonKey is Aglais io",
 "Year is 2014"
 ]
}

 The dataset includes 33354 records from 38 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022952-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j8ghpv
title: Occurrence Download

description: A dataset containing 1607 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilopsis leucophaeata",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 1607 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022953-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17792065
title: LATAM_PM2.5_1km_Anual: Predicciones anuales de concentraciones de PM₂.₅ para cinco ciudades de América Latina (2015-2024)

description: Resumen

LATAM_PM2.5_1km_Anual es parte de una serie de conjuntos de datos regionales que proveen predicciones de concentraciones de PM2.5 de alta resolución a nivel del suelo en cinco ciudades principales de América Latina para distintas resoluciones temporales (anuales, mensuales, diarias) para el periodo 2015-2024. Se genera a partir de múltiples fuentes de datos (por ejemplo, mediciones terrestres, productos de teledetección satelital y reanálisis atmosférico) utilizando modelos de machine learning (ML).

Codigo

Scripts de R para la generación de los modelos y la construcción de los datos, incluyendo códigos para la conversión de formatos y visualización: https://github.com/joseurquiza88/Prediccion-AQ-LatAm

Tesis doctoral relacionada: Productos satelitales como herramienta clave para predecir la variabilidad espacio-temporal del PM2.5 en centros urbanos de América Latina.
DOI: 10.5281/zenodo.17792064
title: LATAM_PM2.5_1km_Anual: Predicciones anuales de concentraciones de PM₂.₅ para cinco ciudades de América Latina (2015-2024)

description: Resumen

LATAM_PM2.5_1km_Anual es parte de una serie de conjuntos de datos regionales que proveen predicciones de concentraciones de PM2.5 de alta resolución a nivel del suelo en cinco ciudades principales de América Latina para distintas resoluciones temporales (anuales, mensuales, diarias) para el periodo 2015-2024. Se genera a partir de múltiples fuentes de datos (por ejemplo, mediciones terrestres, productos de teledetección satelital y reanálisis atmosférico) utilizando modelos de machine learning (ML).

Codigo

Scripts de R para la generación de los modelos y la construcción de los datos, incluyendo códigos para la conversión de formatos y visualización: https://github.com/joseurquiza88/Prediccion-AQ-LatAm

Tesis doctoral relacionada: Productos satelitales como herramienta clave para predecir la variabilidad espacio-temporal del PM2.5 en centros urbanos de América Latina.
DOI: 10.15468/dl.vwugx4
title: Occurrence Download

description: A dataset containing 201882 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tinca tinca"
 ]
}

 The dataset includes 201882 records from 535 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022900-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/3qnyqe
title: PAN-00180085 - non-military uniform button

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00180085&lt;/p&gt;
description: Modified: 2025-09-29T15:18:15+02:00
DOI: 10.5281/zenodo.17793346
title: SILVA database version 138.2

description: SILVA database version 138.2 including: 1) FASTA file not aligned; 2) FASTA file aligned; 3) Taxonomy file.
DOI: 10.5281/zenodo.17793345
title: SILVA database version 138.2

description: SILVA database version 138.2 including: 1) FASTA file not aligned; 2) FASTA file aligned; 3) Taxonomy file.
DOI: 10.15468/dl.hhz8gg
title: Occurrence Download

description: A dataset containing 521 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Mikania argyreiae"
 ]
}

 The dataset includes 521 records from 95 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022955-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7ktuhq
title: Occurrence Download

description: A dataset containing 10461 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mytilus galloprovincialis",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 10461 records from 195 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022956-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.17793668
title: Thermoluminescence glow curves of cold-curated Apollo 17 deep drill core samples

description: This data set contains the raw thermoluminescence glow curves, both natural and induced, of Apollo 17 deep drill core samples, placed in cold curation about one month after receipt by NASA's Johnson Space Center sample laboratory. We also provide blackbody-corrected glow curves and glow curve deconvolution results.

All glow curve data are in .csv format, while glow curve deconvolutions are saved in MS Excel files.
DOI: 10.5281/zenodo.17793669
title: Thermoluminescence glow curves of cold-curated Apollo 17 deep drill core samples

description: This data set contains the raw thermoluminescence glow curves, both natural and induced, of Apollo 17 deep drill core samples, placed in cold curation about one month after receipt by NASA's Johnson Space Center sample laboratory. We also provide blackbody-corrected glow curves and glow curve deconvolution results.

All glow curve data are in .csv format, while glow curve deconvolutions are saved in MS Excel files.
DOI: 10.17026/ar/mgtiks
title: PAN-00178033 - wire brooch with angular bow variant A1

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00178033&lt;/p&gt;
description: Modified: 2025-08-07T17:08:37+02:00
DOI: 10.5281/zenodo.17794121
title: Dark Matter is Not Matter: Exact 0.300 GeV/cm³ as Thermodynamic Fingerprint of Galactic Electromagnetic Coherence

description: This work derives the observed local dark-matter density of the Milky Way

ρ_DM = 0.300 ± 0.015 GeV/cm³

exactly and without free parameters from the entanglement entropy of the electromagnetic vacuum across the boundary between the coherent galactic disk and the surrounding cosmological vacuum.The only inputs are the measured galactic magnetic coherence length R_coh ≈ 1 kpc and the disk geometry. Gravity and the “missing mass” emerge as pure entropic effects of quantum electromagnetic correlations in a fundamentally timeless and spaceless ontology.Three sharp, falsifiable predictions are provided:detectable weight anomaly (Δm/m ∼ 10⁻⁴–10⁻³) inside perfect superconductors (Meissner phase)

constant, B²-dependent phase shift in MAGIS-100/AION-km/ZAIGA interferometers

perfect correlation between weak-lensing and synchrotron maps (SKA era)
DOI: 10.5281/zenodo.17794122
title: Dark Matter is Not Matter: Exact 0.300 GeV/cm³ as Thermodynamic Fingerprint of Galactic Electromagnetic Coherence

description: This work derives the observed local dark-matter density of the Milky Way

ρ_DM = 0.300 ± 0.015 GeV/cm³

exactly and without free parameters from the entanglement entropy of the electromagnetic vacuum across the boundary between the coherent galactic disk and the surrounding cosmological vacuum.The only inputs are the measured galactic magnetic coherence length R_coh ≈ 1 kpc and the disk geometry. Gravity and the “missing mass” emerge as pure entropic effects of quantum electromagnetic correlations in a fundamentally timeless and spaceless ontology.Three sharp, falsifiable predictions are provided:detectable weight anomaly (Δm/m ∼ 10⁻⁴–10⁻³) inside perfect superconductors (Meissner phase)

constant, B²-dependent phase shift in MAGIS-100/AION-km/ZAIGA interferometers

perfect correlation between weak-lensing and synchrotron maps (SKA era)
DOI: 10.15468/dl.ct69z5
title: Occurrence Download

description: A dataset containing 79779 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EOD – eBird Observation Dataset",
 "Geometry POLYGON((-82.29769 28.72195,-82.59049 28.87129,-83.00967 28.73844,-83.00658 27.84573,-82.51348 27.77237,-82.29757 27.84597,-82.2462 28.33026,-82.29769 28.72195))",
 "HasGeospatialIssue is false",
 "TaxonKey is one of (Falconidae, Cathartidae, Accipitridae, Setophaga chrysoparia, Haliaeetus leucocephalus, Haliaeetus leucocephalus washingtoniensis, Haliaeetus leucocephalus leucocephalus, Haliaeetus leucocephalus alascanus)",
 "Year 2023-2025"
 ]
}

 The dataset includes 79779 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022940-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jsz45y
title: Occurrence Download

description: A dataset containing 597 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Neospongodes atlantica",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 597 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022958-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/5kc4q9
title: PAN-00179908 - oval to half round buckle, with ornamented/thickened tongue rest

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00179908&lt;/p&gt;
description: Modified: 2025-09-22T17:09:13+02:00
DOI: 10.15468/dl.6kmf3d
title: Occurrence Download

description: A dataset containing 101208 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Korea, Republic of",
 "DatasetKey is EOD – eBird Observation Dataset",
 "Month is May",
 "Year 2021-2024"
 ]
}

 The dataset includes 101208 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022934-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/99l-6vb-v87
title: Arenaria muscoides Kunth

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/b38-arc-w4z
title: Arenaria muscoides Kunth

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.3535/fnf-gr4-vnk
title: Arenaria muscoides Kunth

description: Digital Specimen for the physical specimen hosted at Botanic Garden and Botanical Museum Berlin.
DOI: 10.5281/zenodo.17793019
title: Bound Graph Clustering with Graph Neural Networks

description: This repository contains the synthetic networks used for the evaluation of our proposed constraint. All networks were created using the python package PyTorch Geometric version 2.5.2.
DOI: 10.5281/zenodo.17793018
title: Bound Graph Clustering with Graph Neural Networks

description: This repository contains the synthetic networks used for the evaluation of our proposed constraint. All networks were created using the python package PyTorch Geometric version 2.5.2.
DOI: 10.6084/m9.figshare.30766106
title: <b>Lake Champlain stable isotopes data 2022</b>

description: This dataset includes fish and primary producers' isotopic data collected in the five basins of Lake Champlain, United States, during the summer and autumn of 2022. Isotopes data of carbon, nitrogen, and sulfur. For more information on the collection, refer to the publication Possamai B, Lesser JS, Chiapella A, Marsden JE & Stockwell JD. 2025. Distinct food web responses to environmental gradients suggest different effects of invasive species in a large, fragmented lake. Ecosystems.
DOI: 10.6084/m9.figshare.30766106.v1
title: <b>Lake Champlain stable isotopes data 2022</b>

description: This dataset includes fish and primary producers' isotopic data collected in the five basins of Lake Champlain, United States, during the summer and autumn of 2022. Isotopes data of carbon, nitrogen, and sulfur. For more information on the collection, refer to the publication Possamai B, Lesser JS, Chiapella A, Marsden JE & Stockwell JD. 2025. Distinct food web responses to environmental gradients suggest different effects of invasive species in a large, fragmented lake. Ecosystems.
DOI: 10.5281/zenodo.17793695
title: Generated synthetic dataset of pixel-level representations of maritime port surveillance vessels under multiple drift scenarios

description: This reporitory contains the synthetic dataset used for the experiments of the article "Drift Detection on Feature Attributions for Monitoring Visual Reinforcement Learning Models in Maritime Port Surveillance".Data is uploaded in python's pickle (.pkl) format.
DOI: 10.5281/zenodo.17793696
title: Generated synthetic dataset of pixel-level representations of maritime port surveillance vessels under multiple drift scenarios

description: This reporitory contains the synthetic dataset used for the experiments of the article "Drift Detection on Feature Attributions for Monitoring Visual Reinforcement Learning Models in Maritime Port Surveillance".Data is uploaded in python's pickle (.pkl) format.
DOI: 10.15468/dl.jn4fmn
title: Occurrence Download

description: A dataset containing 12756 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is United Kingdom of Great Britain and Northern Ireland",
 "DatasetKey is one of (EOD – eBird Observation Dataset, 1988 - 2023 Capercaillie Annual Lek Monitoring, Raw Data, 1994 - 2023 Capercaillie Cold Searches, Scotland)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tetrao urogallus",
 "Year 1990-2025"
 ]
}

 The dataset includes 12756 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022961-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7avgvx
title: Occurrence Download

description: A dataset containing 494252 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Merluccius bilinearis"
 ]
}

 The dataset includes 494252 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022935-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.67m25y
title: Occurrence Download

description: A dataset containing 373 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Omobranchus punctatus",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 373 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0022960-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/rd8oeq
title: PAN-00115267 - coin/coin-related, Constans (337-350) / Constantius II (337-361), nummus

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00115267&lt;/p&gt;
description: Modified: 2025-08-26T08:59:54+02:00