cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.atjgea
title: Occurrence Download

description: A dataset containing 137102 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Canada",
 "Geometry POLYGON((-95.50781 82.49482,-47.22656 42.72548,1.52344 61.60639,11.83594 78.15857,6.21094 84.40594,-52.38281 84.26717,-95.50781 82.49482))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is August",
 "Year 1979-2021"
 ]
}

 The dataset includes 137102 records from 135 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0186178-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.smh6ux
title: Occurrence Download

description: A dataset containing 120343 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Specimen",
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Machine Observation",
 "BasisOfRecord is Living Specimen",
 "BasisOfRecord is Fossil",
 "BasisOfRecord is Material sample"
 ]
 },
 "Country is Kenya",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 120343 records from 147 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018778-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25402/pgs.21930675
title: A Single-tube multiplex real-time polymerase chain reaction for HLA-B*38:02 genotype by detecting highly specific SNPs - Supplementary_Material

description:  <strong>Figure S1</strong> Fluorescence amplification curves of <em>HLA-B*38:02</em> sample and negative samples (A)Fluorescence amplification curves of <em>HLA-B*38:02</em> sample and <em>B*13:01/B*44:02/B*39:01 </em>samples; NTC, non-template control (B) Fluorescence amplification curves of <em>HLA-B*38:02 </em>sample and<em> B*07:02/B*38:01/B*56:07</em> samples; NTC, non-template control (C) Fluorescence amplification curves of <em>HLA-B*38:02</em> sample and <em>B*46:01/B*40:01/B*51:01</em> samples; NTC, non-template control (D) Fluorescence amplification curves of <em>HLA-B*38:02 </em>sample and <em>B*54:01/B*51:02</em> samples; NTC, non-template control 
<br>
  
<strong>Table S1</strong> The genotyping results of 100 DNA samples by PCR-SBT and the established Real-time PCR
DOI: 10.25402/pgs.21930675.v1
title: A Single-tube multiplex real-time polymerase chain reaction for HLA-B*38:02 genotype by detecting highly specific SNPs - Supplementary_Material

description:  <strong>Figure S1</strong> Fluorescence amplification curves of <em>HLA-B*38:02</em> sample and negative samples (A)Fluorescence amplification curves of <em>HLA-B*38:02</em> sample and <em>B*13:01/B*44:02/B*39:01 </em>samples; NTC, non-template control (B) Fluorescence amplification curves of <em>HLA-B*38:02 </em>sample and<em> B*07:02/B*38:01/B*56:07</em> samples; NTC, non-template control (C) Fluorescence amplification curves of <em>HLA-B*38:02</em> sample and <em>B*46:01/B*40:01/B*51:01</em> samples; NTC, non-template control (D) Fluorescence amplification curves of <em>HLA-B*38:02 </em>sample and <em>B*54:01/B*51:02</em> samples; NTC, non-template control 
<br>
  
<strong>Table S1</strong> The genotyping results of 100 DNA samples by PCR-SBT and the established Real-time PCR
DOI: 10.25402/pgs.21981872
title: Effects of UGT1A, CYP2C9/19 and ABAT polymorphisms on plasma concentration of valproic acid in Chinese epilepsy patients - Supplementary_materials

description: Tables S1-6
figures S1- 21
DOI: 10.25402/pgs.21981872.v1
title: Effects of UGT1A, CYP2C9/19 and ABAT polymorphisms on plasma concentration of valproic acid in Chinese epilepsy patients - Supplementary_materials

description: Tables S1-6
figures S1- 21
DOI: 10.25402/pgs.22293157
title: Impact Of Genetic Polymorphisms On Tacrolimus Trough Blood Concentration In Chinese Liver Transplant Recipients - Supplementary material

description: Supplementary Figure 1: Association Analysis. Note: The two graphs represent the association between candidate SNPs with TAC log (C0/D). The red dotted line represents the Bonferroni corrected significance level and the blue dotted line represents the nominal significance level.
  
<strong>Supplementary Table 1</strong>: HRM primer details.
  
<strong>Supplementary Table 2</strong>: Sequencing primer details.
DOI: 10.25402/pgs.22293157.v1
title: Impact Of Genetic Polymorphisms On Tacrolimus Trough Blood Concentration In Chinese Liver Transplant Recipients - Supplementary material

description: Supplementary Figure 1: Association Analysis. Note: The two graphs represent the association between candidate SNPs with TAC log (C0/D). The red dotted line represents the Bonferroni corrected significance level and the blue dotted line represents the nominal significance level.
  
<strong>Supplementary Table 1</strong>: HRM primer details.
  
<strong>Supplementary Table 2</strong>: Sequencing primer details.
DOI: 10.25402/pgs.22434259
title: Truth and lies about the use of old drugs against COVID-19: have we learned the lesson? - Supplementary material

description: Supplementary Table 1. Association of methylation levels of CpG units of SLC19A1 promoter region and the clinical parameters of adult ALL patients
Supplementary Table 2. Correlation analysis of methylation levels for CpG units of SLC19A1 promoter region and MTX concentrations in adult ALL patients
Supplementary Table 3. Correlation analysis of methylation levels for CpG units of SLC19A1 promoter region and MTX elimination delay in adult ALL patients
Supplementary Table 4. Association of methylation levels for CpG units of SLC19A1 promoter region and MTX toxicities in adult ALL patients
Supplementary Table 5. Incidence of toxicities and MTX delayed excretion patients
<br>
DOI: 10.25402/pgs.22434259.v1
title: Truth and lies about the use of old drugs against COVID-19: have we learned the lesson? - Supplementary material

description: Supplementary Table 1. Association of methylation levels of CpG units of SLC19A1 promoter region and the clinical parameters of adult ALL patients
Supplementary Table 2. Correlation analysis of methylation levels for CpG units of SLC19A1 promoter region and MTX concentrations in adult ALL patients
Supplementary Table 3. Correlation analysis of methylation levels for CpG units of SLC19A1 promoter region and MTX elimination delay in adult ALL patients
Supplementary Table 4. Association of methylation levels for CpG units of SLC19A1 promoter region and MTX toxicities in adult ALL patients
Supplementary Table 5. Incidence of toxicities and MTX delayed excretion patients
<br>
DOI: 10.25402/pgs.22551634
title: Effects of ADIPOQ & NOS3 SNP/haplotypes on blood pressure control in patients with adherence to antihypertensive therapy - Supplementary Material

description:   
<strong>Supplementary Table S1</strong>. Frequency of antihypertensive drug classes and quantity used by the hypertensive subjects grouped according to blood pressure control.
DOI: 10.25402/pgs.22698784
title: Patient Satisfaction with Return of Pharmacogenomic Results Utilizing a Patient Portal Message - supplementary material

description: Supporting Materials: Table 1: List of all questions and answer options included in this survey.
Figure Supporting Materials 2: Answers to the question: Who contacted you about your Pharmacogenomics (PGx) results?
Figure Supporting Materials 3: Answers to the question I was given written information explaining what the results mean to me.
Figure Supporting Materials 4: Answers to the question: I was given access to a video explaining what the results mean to me.
Figure Supporting Materials 5: Answers to the question: If a friend was interested in having Pharmacogenomics (PGx) testing, how likely are you to recommend they have it done?
Figure Supporting Materials 6: Discrete answers to the question: How do you prefer to be contacted with Pharmacogenomics (PGx) results? (Please select all that apply)
Figure Supporting Materials 7: Comparison of the text of the PRM sent prior to adjusting the process of sending the message to all panel-based testing patients.
DOI: 10.25402/pgs.22802633
title: Genetic variants of the Nrf2/ARE pathway on the risk of anti-tuberculosis drug-induced liver injury: a systematic review - supplementary material

description:   
Table S1. Search strategies and results
  
Table S2. Quality assessment of the included studies (NOS)
  
Figure S1. Forest plot of AT-DILI risk associated with rs2001350 polymorphism in <em>NFE2L2</em> of Nrf2/ARE pathway under different genetic model
  
Figure S2. Forest plot of AT-DILI risk associated with rs6726395 polymorphism in <em>NFE2L2</em> of Nrf2/ARE pathway under different genetic model
  
Figure S3. Forest plot of AT-DILI risk associated with rs2070401 polymorphism in <em>BACH1</em> of Nrf2/ARE pathway under different genetic model
  
Figure S4. Forest plot of AT-DILI risk associated with 14 SNPs polymorphism (reported by 2 different studies) in the Nrf2/ARE pathway (dominant model)
  
Figure S5. Forest plot of AT-DILI risk associated with 14 SNPs polymorphism (reported by 2 different studies) in the Nrf2/ARE pathway (recessive model)
  
Figure S6. Forest plot of AT-DILI risk associated with 14 SNPs polymorphism (reported by 2 different studies) in the Nrf2/ARE pathway (allele model)
  
Figure S7. Risk of bias of the included studies.
DOI: 10.25402/pgs.22802633.v1
title: Genetic variants of the Nrf2/ARE pathway on the risk of anti-tuberculosis drug-induced liver injury: a systematic review - supplementary material

description:   
Table S1. Search strategies and results
  
Table S2. Quality assessment of the included studies (NOS)
  
Figure S1. Forest plot of AT-DILI risk associated with rs2001350 polymorphism in <em>NFE2L2</em> of Nrf2/ARE pathway under different genetic model
  
Figure S2. Forest plot of AT-DILI risk associated with rs6726395 polymorphism in <em>NFE2L2</em> of Nrf2/ARE pathway under different genetic model
  
Figure S3. Forest plot of AT-DILI risk associated with rs2070401 polymorphism in <em>BACH1</em> of Nrf2/ARE pathway under different genetic model
  
Figure S4. Forest plot of AT-DILI risk associated with 14 SNPs polymorphism (reported by 2 different studies) in the Nrf2/ARE pathway (dominant model)
  
Figure S5. Forest plot of AT-DILI risk associated with 14 SNPs polymorphism (reported by 2 different studies) in the Nrf2/ARE pathway (recessive model)
  
Figure S6. Forest plot of AT-DILI risk associated with 14 SNPs polymorphism (reported by 2 different studies) in the Nrf2/ARE pathway (allele model)
  
Figure S7. Risk of bias of the included studies.
DOI: 10.15468/dl.y8tren
title: Occurrence Download

description: A dataset containing 3483 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Solanum betaceum Cav.)"
 ]
}

 The dataset includes 3483 records from 234 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019444-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25402/pgs.23131523
title: Supplementary Tables: The frequency of major ABCG2, SLCO1B1 and CYP2C9 variants in Asian, Native Hawaiian and Pacific Islander women subgroups: implications for personalized statins dosing

description: Supplementary Tables
DOI: 10.4121/2558bd4c-d7ad-4e17-bc54-8c335b4c1c01
title: Translational Organ-on-chip Platform (TOP) Design Rules (TDRs)

description: In this presentation, ISO-compliant design criteria of the standards document ISO 22916:2022 "Microfluidic devices — Interoperability requirements for dimensions, connections and initial device classification" is shown. This content serves as documentation of design rules for compatibility with the Translational Organ-on-chip Platform (TOP). These design rules are aimed at organ-on-chip developers when creating or adapting existing designs, so that the new designs are compatible with TOP materials.
DOI: 10.4121/2558bd4c-d7ad-4e17-bc54-8c335b4c1c01.v1
title: Translational Organ-on-chip Platform (TOP) Design Rules (TDRs)

description: In this presentation, ISO-compliant design criteria of the standards document ISO 22916:2022 "Microfluidic devices — Interoperability requirements for dimensions, connections and initial device classification" is shown. This content serves as documentation of design rules for compatibility with the Translational Organ-on-chip Platform (TOP). These design rules are aimed at organ-on-chip developers when creating or adapting existing designs, so that the new designs are compatible with TOP materials.
DOI: 10.25402/pgs.23259650
title: Pharmacogenetics of pain management in Zimbabwean patients with sickle cell disease: Supplementary Table

description: Supplementary Table 1
DOI: 10.15468/dl.wm2xkj
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hemigrapsus tanakoi Asakura & Watanabe, 2005"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019445-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25402/pgs.23798727.v2
title: Characterizing the combined effects of cytochrome P450 missense variation within star allele definitions

description: <b>Supplementary Figure 1. Comparison of Fold-X computed (∆∆</b><b>G</b><b>) and ENCoM-computed (∆∆</b><b>S</b><b>vib</b><b>).</b> Each haplotype is represented by a maroon square and their defining missense variants are represented by circles. Figure points that fall within the highlighted region are expected to have neutral effects on protein stability [1]. ∆∆G predicts most of the variants and haplotypes as destabilising to the protein encoded protein structures. Both ∆∆G and ∆∆S<sub>vib</sub> seem to exhibit a destabilising bias for both haplotype and variants. However, ∆∆S<sub>vib</sub> predicted more haplotypes and variants to have neutral effects on protein stability than ∆∆G (see also Figure 3A).<b>Supplementary Table 1. </b>This table presents all 261 missense variants analysed in this study, together with their FoldX and ENCoM-derived energy scores. A combined ∆∆G (combination of ENCoM and FoldX) is presented, from which a prediction of the effect of each variant is made based on the threshold (-0.5 &lt; combined ∆∆G &lt; 0.5) [1]. Predictions from commonly used Ensembl Variant Effect Predictor (VEP; https://www.ensembl.org/ToolsVEP) [2] plugins as well as a consensus (2 from 3 rule) has been included for comparison with combined ∆∆G predictions<b>Supplementary Table 2. CYP star allele/haplotype NMA analysis.</b><i> </i>This table presents 92 CYP star alleles together with the defining missense variants for each star allele. Moreover, a CPIC functional classification is included together with the NMA-based combined ∆∆G analysis.<b>Supplementary Table 3. SWAAT analysis of CYP missense variant structural consequence.</b>
DOI: 10.25402/pgs.23904405
title: Association of IL4RA polymorphism in predicting susceptibility toward chronic obstructive pulmonary disease

description: Supplementary tables
DOI: 10.25402/pgs.23904405.v1
title: Association of IL4RA polymorphism in predicting susceptibility toward chronic obstructive pulmonary disease

description: Supplementary tables
DOI: 10.25402/pgs.24131613
title: Influence of polymorphisms in CYP2C9, VKORC1, MDR1 and APOE genes on the warfarin maintenance dose in Brazilian patients

description: suppl data
DOI: 10.25402/pgs.24131613.v1
title: Influence of polymorphisms in CYP2C9, VKORC1, MDR1 and APOE genes on the warfarin maintenance dose in Brazilian patients

description: suppl data
DOI: 10.25402/pgs.24155049
title: Quadratus lumborum block and transversus abdominis plane block in laparoscopic nephrectomy: a meta-analysis

description: For each domain a judgment of either ‘no concerns’, ‘some concerns’ or ‘major concerns’ are established. Finally,a summary of all domain judgments is made at the end as having either ‘very low’, ‘low’, ‘moderate’ or ‘high’confidence rating (Supplementary Table 1)
DOI: 10.25402/pgs.24155049.v1
title: Quadratus lumborum block and transversus abdominis plane block in laparoscopic nephrectomy: a meta-analysis

description: For each domain a judgment of either ‘no concerns’, ‘some concerns’ or ‘major concerns’ are established. Finally,a summary of all domain judgments is made at the end as having either ‘very low’, ‘low’, ‘moderate’ or ‘high’confidence rating (Supplementary Table 1)
DOI: 10.25402/pgs.24321316
title: Distribution of pharmacogene allele and phenotype frequencies in Brazilian psychiatric patients

description: suppl table
DOI: 10.25402/pgs.24321316.v1
title: Distribution of pharmacogene allele and phenotype frequencies in Brazilian psychiatric patients

description: suppl table
DOI: 10.25402/pgs.24324496
title: Effects of <i>CYP3A4</i> and <i>CYP2C9</i> genotype on systemic anastrozole and fulvestrant concentrations in SWOG S0226 - Supplementary material

description: <b>Supplementary Table 1</b>: Numbers of Patients in High and Low Activity Groups for Each Gene<b>Supplementary Figure 1</b>: Associations between <i>SLC28A7</i> rs16960359 (Top) and <i>ALPPL2</i> rs883013 (Bottom) variants and systemic anastrozole concentration in all patients.
DOI: 10.25402/pgs.24324496.v1
title: Effects of <i>CYP3A4</i> and <i>CYP2C9</i> genotype on systemic anastrozole and fulvestrant concentrations in SWOG S0226 - Supplementary material

description: <b>Supplementary Table 1</b>: Numbers of Patients in High and Low Activity Groups for Each Gene<b>Supplementary Figure 1</b>: Associations between <i>SLC28A7</i> rs16960359 (Top) and <i>ALPPL2</i> rs883013 (Bottom) variants and systemic anastrozole concentration in all patients.
DOI: 10.25402/pgs.24511054
title: Characterization of CYP2C19 pharmacogenetic variation in African populations and comparison with other global populations

description: supplementary tables
DOI: 10.25402/pgs.24511054.v1
title: Characterization of CYP2C19 pharmacogenetic variation in African populations and comparison with other global populations

description: supplementary tables
DOI: 10.25402/pgs.24581223
title: Pharmacogenomics implementation across multiple clinic settings: a qualitative evaluation

description: Supplementary data - Interview guide.
DOI: 10.25402/pgs.24581223.v1
title: Pharmacogenomics implementation across multiple clinic settings: a qualitative evaluation

description: Supplementary data - Interview guide.
DOI: 10.25402/pgs.24885285
title: Effect of gene variants on opioid dose, pain and adverse effect outcomes in advanced cancer: an explorative study

description: Suppl tables
DOI: 10.25402/pgs.24885285.v1
title: Effect of gene variants on opioid dose, pain and adverse effect outcomes in advanced cancer: an explorative study

description: Suppl tables
DOI: 10.25402/pgs.24960375
title: Association between CYP3A4, CYP3A5 and ABCB1 genotype and tacrolimus treatment outcomes among allogeneic HSCT patients

description: <b>S</b>upplementary tables - baseline characteristics of CYP3A4, CYP3A5 and ABCB1 phenotypes
DOI: 10.25402/pgs.24960375.v1
title: Association between CYP3A4, CYP3A5 and ABCB1 genotype and tacrolimus treatment outcomes among allogeneic HSCT patients

description: <b>S</b>upplementary tables - baseline characteristics of CYP3A4, CYP3A5 and ABCB1 phenotypes
DOI: 10.25402/pgs.25340944
title: Workforce readiness for pharmacogenomics and key elements for sustainment within the Veterans Health Administration

description: suppl info
DOI: 10.25402/pgs.25340944.v1
title: Workforce readiness for pharmacogenomics and key elements for sustainment within the Veterans Health Administration

description: suppl info
DOI: 10.15468/dl.bhk9xp
title: Occurrence Download

description: A dataset containing 8104 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Solanum campylacanthum Hochst. ex A.Rich.)"
 ]
}

 The dataset includes 8104 records from 58 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019446-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25402/pgs.25450174
title: Implementation of whole-exome sequencing for pharmacogenomics profiling and exploring its potential clinical utilities

description: suppl data
DOI: 10.25402/pgs.25450174.v1
title: Implementation of whole-exome sequencing for pharmacogenomics profiling and exploring its potential clinical utilities

description: suppl data
DOI: 10.15468/dl.6w9hn4
title: Occurrence Download

description: A dataset containing 914 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Actaeodes tomentosus (H.Milne Edwards, 1834)"
 ]
}

 The dataset includes 914 records from 54 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019447-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4hkdn5
title: Occurrence Download

description: A dataset containing 4068 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Solanum capsicoides All.)"
 ]
}

 The dataset includes 4068 records from 232 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019448-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ccwapy
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AAF1434"
 ]
}

 The dataset includes 7 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019449-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dcnq6k
title: Occurrence Download

description: A dataset containing 3372 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "TaxonKey is Rhododendron simsii Planch."
 ]
}

 The dataset includes 3372 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019451-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5bvcwb
title: Occurrence Download

description: A dataset containing 38191 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Solanum carolinense L.)"
 ]
}

 The dataset includes 38191 records from 317 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019450-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ntkwrm
title: Occurrence Download

description: A dataset containing 162 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Actaea tomentosa (H.Milne Edwards, 1834)"
 ]
}

 The dataset includes 162 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0019452-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.