cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.48425/0006595
title: V_heath_plant_species_composition_experimental

description: Plant species composition in herbivore exclosures and control plots in heath sites.\r\n\r\nThe dataset includes three different types of files and all files (except the readme) are saved as ;-separated txt-files: \r\n\r\n* One data file per year (_YEAR.txt) \r\n\r\n* One coordinate file with coordinates of all sites included in the dataset (_coordinates.txt) \r\n\r\n* One auxiliary file with information about which sites are included in the dataset and when (_aux.txt) \r\n\r\n* One readme file with additional information about the variables included in the study design (_readme.pdf)\r\n\r\nThe data is not publicly available yet.\r\n
DOI: 10.48425/0034748
title: V_heath_shrub_height_experimental

description: Shrub height of *Betula nana* and thicket forming *Salix sp.* in herbivore exclosures and control plots in heath sites.\r\n\r\nThe dataset includes three different types of files and all files (except the readme) are saved as ;-separated txt-files: \r\n\r\n* One data file per year (_YEAR.txt) \r\n\r\n* One coordinate file with coordinates of all sites included in the dataset (_coordinates.txt) \r\n\r\n* One auxiliary file with information about which sites are included in the dataset and when (_aux.txt) \r\n\r\n* One readme file with additional information about the variables included in the study design (_readme.pdf)\r\n\r\nThe data is not publicly available yet.\r\n
DOI: 10.48425/0098524
title: V_heath_vascular_plant_abundance_experimental

description: Vascular plant abundance in herbivore exclosures and control plots in heath sites.\r\n\r\nThe dataset includes three different types of files and all files (except the readme) are saved as ;-separated txt-files: \r\n\r\n* One data file per year (_YEAR.txt) \r\n\r\n* One coordinate file with coordinates of all sites included in the dataset (_coordinates.txt) \r\n\r\n* One auxiliary file with information about which sites are included in the dataset and when (_aux.txt) \r\n\r\n* One readme file with additional information about the variables included in the study design (_readme.pdf)\r\n\r\nThe data is not publicly available yet.\r\n
DOI: 10.48425/0015018
title: V_insect_commun_diptera_deadwood

description: Count data from flight-interception trapping of diptera at two locations in eastern Finnmark. Data organized in one file per year, plus a coordinate file.
DOI: 10.48425/0003636
title: V_meadow_ground_cover_experimental

description: Ground cover in herbivore exclosures and control plots in meadow sites.\r\n\r\nThe dataset includes three different types of files and all files (except the readme) are saved as ;-separated txt-files: \r\n\r\n* One data file per year (_YEAR.txt) \r\n\r\n* One coordinate file with coordinates of all sites included in the dataset (_coordinates.txt) \r\n\r\n* One auxiliary file with information about which sites are included in the dataset and when (_aux.txt) \r\n\r\n* One readme file with additional information about the variables included in the study design (_readme.pdf)\r\n\r\nThe data is not publicly available yet.\r\n
DOI: 10.48425/0015258
title: V_meadow_plant_species_composition_experimental

description: Plant species composition in herbivore exclosures and control plots in meadow sites.\r\n\r\nThe dataset includes three different types of files and all files (except the readme) are saved as ;-separated txt-files: \r\n\r\n* One data file per year (_YEAR.txt) \r\n\r\n* One coordinate file with coordinates of all sites included in the dataset (_coordinates.txt) \r\n\r\n* One auxiliary file with information about which sites are included in the dataset and when (_aux.txt) \r\n\r\n* One readme file with additional information about the variables included in the study design (_readme.pdf)\r\n\r\nThe data is not publicly available yet.\r\n
DOI: 10.48425/0042092
title: V_rodents_pellets_abundance_snowbed_intensive

description: Herbivore pellet counts in snowbed habitats on the Varanger peninsula. This dataset has data from the COAT intensive study design.\r\n\r\nThe dataset includes four different types of files and all files are saved as ;-separated txt-files:\r\n\r\n* One data file per year (_YEAR.txt)\r\n* One coordinate file with coordinates of all sites (_coordinates.txt)\r\n* One auxiliary file with information about which sites are included in the study design (_aux.txt)\r\n*One readme file with additional information (_readme.pdf)\r\n\r\nFirst version of the dataset contains only metadata, and is publicly available for download. After first publication of the data, subsequent versions of the dataset will be available with two-year embargo.
DOI: 10.48425/0056361
title: V_snowbed_ground_cover_experimental

description: Ground cover data in herbivore exclosures and control plots in snowbeds on the Varanger peninsula.\r\n\r\nThe dataset includes three different types of files and all files (except the readme) are saved as ;-separated txt-files: \r\n\r\n* One data file per year (_YEAR.txt) \r\n\r\n* One coordinate file with coordinates of all sites included in the dataset (_coordinates.txt) \r\n\r\n* One auxiliary file with information about which sites are included in the dataset and when (_aux.txt) \r\n\r\n* One readme file with additional information about the variables included in the study design (_readme.pdf)\r\n\r\nThe data is not publicly available yet.
DOI: 10.48425/0080264
title: V_snowbed_plant_species_composition_experimental

description: Plant species composition in herbivore exclosures and control plots in snowbeds on the Varanger peninsula.\r\n\r\nThe dataset includes three different types of files and all files (except the readme) are saved as ;-separated txt-files: \r\n\r\n* One data file per year (_YEAR.txt) \r\n\r\n* One coordinate file with coordinates of all sites included in the dataset (_coordinates.txt) \r\n\r\n* One auxiliary file with information about which sites are included in the dataset and when (_aux.txt) \r\n\r\n* One readme file with additional information about the variables included in the study design (_readme.pdf)\r\n\r\nThe data is not publicly available yet.\r\n
DOI: 10.48425/0040096
title: V_snowbed_shrub_abundance_intensive

description: Abundance of dwarf shrubs in snowbed habitats measured as presence/absence in subplots. This dataset has data from the COAT Varanger intensive study design. \r\n\r\nThe dataset includes four different types of files and all files are saved as ;-separated txt-files:\r\n\r\n* One data file per year (_YEAR.txt)\r\n* One coordinate file with coordinates of all sites (_coordinates.txt)\r\n* One auxiliary file with information about which sites are included in the study design (_aux.txt)\r\n* One readme file with additional information (_readme.pdf)\r\n\r\nFirst version of the dataset contains only metadata, and is publicly available for download. After first publication of the data, subsequent versions of the dataset will be available with two-year embargo.\r\n
DOI: 10.48425/0077858
title: V_snowbed_shrub_height_experimental

description: Shrub height in herbivore exclosures and control plots in snowbeds on the Varanger peninsula.\r\n\r\nThe dataset includes three different types of files and all files (except the readme) are saved as ;-separated txt-files: \r\n\r\n* One data file per year (_YEAR.txt) \r\n\r\n* One coordinate file with coordinates of all sites included in the dataset (_coordinates.txt) \r\n\r\n* One auxiliary file with information about which sites are included in the dataset and when (_aux.txt) \r\n\r\n* One readme file with additional information about the variables included in the study design (_readme.pdf)\r\n\r\nThe data is not publicly available yet.\r\n
DOI: 10.48425/0017647
title: V_snowbed_vascular_plant_abundance_experimental

description: Abundance of vascular plants measured using point intercept frequency in herbivore exclosures and control plots in snowbeds on the Varanger peninsula.\r\n\r\nThe dataset includes three different types of files and all files (except the readme) are saved as ;-separated txt-files: \r\n\r\n* One data file per year (_YEAR.txt) \r\n\r\n* One coordinate file with coordinates of all sites included in the dataset (_coordinates.txt) \r\n\r\n* One auxiliary file with information about which sites are included in the dataset and when (_aux.txt) \r\n\r\n* One readme file with additional information about the variables included in the study design (_readme.pdf)\r\n\r\nThe data is not publicly available yet.\r\n
DOI: 10.48425/0003596
title: V_tall_shrub_shrub_height_experimental

description: Shrub height of *Betula nana* and thicket forming *Salix sp.* in herbivore exclosures and control plots in meadow sites.\n\r\nThe dataset includes three different types of files and all files (except the readme) are saved as ;-separated txt-files: \n\r\n* One data file per year (_YEAR.txt) \n\n* One coordinate file with coordinates of all sites included in the dataset (_coordinates.txt) \n\n* One auxiliary file with information about which sites are included in the dataset and when (_aux.txt) \n\n* One readme file with additional information about the variables included in the study design (_readme.pdf)\n\r\nThe data is not publicly available yet.\r\n
DOI: 10.6073/pasta/1b9b80e44e31ff7c0a50b91f77e9b616
title: Detection Histories for Hemlock Woolly Adelgid Infestations at Cadwell Forest in Pelham MA 2008

description: Monitoring programs increasingly are used to document the spread of invasive species in the hope of detecting and eradicating low-density infestations before they become established. However, interobserver variation in the detection and correct identification of low-density populations of invasive species remains largely unexplored. In this study, we compare the abilities of volunteer and experienced individuals to detect low-density populations of an actively spreading invasive species and we explore how interobserver variation can bias estimates of the proportion of sites infested derived from occupancy models that allow for both false negative and false positive (misclassification) errors. We found that experienced individuals detected small infestations at sites where volunteers failed to find infestations. However, occupancy models erroneously suggested that experienced observers had a higher probability of falsely detecting the species as present than did volunteers. This unexpected finding is an artifact of the modeling framework and results from a failure of volunteers to detect low-density infestations rather than from false positive errors by experienced observers. Our findings reveal a potential issue with site occupancy models that can arise when volunteer and experienced observers are used together in surveys.
DOI: 10.5281/zenodo.5013620
title: Population disruption: estimating changes in population distribution in the UK during the COVID-19 pandemic - Estimates for Local Authority Districts

description: <strong>Overview:</strong> Population estimates from the publication: <em>Population disruption: estimating changes in population distribution in the UK during the COVID-19 pandemic.</em> Population estimates were aggregated to Local Authority Districts (LADs). <strong>Methodology: </strong> Population estimates were extracted from Bing Tiles (Zoom Level 12) to 2019 LADs by assigning tiles to LADs by their percent areal overlap. This method assumes constant population distribution across a single Bing Tile. 2019 LAD boundaries are available from the UK Government Open Geography Portal.
DOI: 10.5281/zenodo.5013619
title: Population disruption: estimating changes in population distribution in the UK during the COVID-19 pandemic - Estimates for Local Authority Districts

description: <strong>Overview:</strong> Population estimates from the publication: <em>Population disruption: estimating changes in population distribution in the UK during the COVID-19 pandemic.</em> Population estimates were aggregated to Local Authority Districts (LADs). <strong>Methodology: </strong> Population estimates were extracted from Bing Tiles (Zoom Level 12) to 2019 LADs by assigning tiles to LADs by their percent areal overlap. This method assumes constant population distribution across a single Bing Tile. 2019 LAD boundaries are available from the UK Government Open Geography Portal.
DOI: 10.6073/pasta/ea09459f5fbac84eb3b3a743cc68862a
title: Soil Water Content at Harvard Forest HEM and LPH Towers 1998-2007

description: Water content of the top 20 cm of soil was measured using 1.5 inch diameter soil cores. Soil water content is of particular interest and importance in explaining patterns of soil respiration (including root respiration) and ecosystem respiration, 60 to 75% of which occurs below the ground surface at Harvard Forest. Soil water content in deciduous forest near the Little Prospect Hill Forest was in general found to be more variable than near the Hemlock tower. One influence contributing to this is the presence of a water table within 1 m of the soil surface near the hemlock tower, compared to a water table at unknown depth in the deeply drained soils in most parts of Little Prospect Hill. Relatively low evapotranspiration at the Hemlock tower site during the period when deciduous trees are foliated also contributes to higher water content in soil there, and a relatively thick surface organic layer. These influences tend to maintain soil respiration at higher levels in the hemlock forest during dry summers, but excessive moisture in the soil at the Hemlock site during very wet summers appears to suppress soil respiration.
DOI: 10.15129/9defb3bd-c968-4666-a928-c08c93258693
title: Data for: "Measurement of acetylene concentration in laminar flat-flames by diode laser cavity ring-down spectroscopy"

description: The research data for the paper titled above is contained in two csv files with the titles 'cw-CRDS_Acetylene_mole_fraction_Data' and 'cw-CRDS_Extinction_Coefficient_Data'. The 'cw-CRDS_Acetylene_mole_fraction_Data' file contains the dataset for mole fractions of acetylene, extracted from continuous-wave cavity ring-down measurements (near 1535 nm) for premixed flat-flames of premixed ethylene and air, with a range of equivalence ratios, as a function of Height above the burner surface (HAB). The 'cw-CRDS_Extinction_Coefficient_Data' file contains extinction coefficients measured by the continuous-wave cavity ring-down technique (at 1535 nm) for premixed flat-flames of premixed ethylene and air, with a range of equivalence ratios, as a function of Height above the burner surface (HAB).
DOI: 10.6073/pasta/8422b7a3100a5ac24fa0ad36ac072a98
title: Tree Growth in Hemlock and Deciduous Forests at Harvard Forest HEM and LPH Towers 2000-2005

description: Tree growth was measured to determine tree ages and growth rates and to quantify carbon storage in these forests, and to detect changes in growth and carbon storage that could be associated with climate changes or historic disturbances.
DOI: 10.6084/m9.figshare.14096912.v4
title: Supplementary Information for Current research on microbe-plastic interactions in the marine environment

description: Supplementary information for Current research on microbe-plastic interactions in the marine environmentPlease contact one of the authors for further information on any of this.
DOI: 10.6073/pasta/38ae46d8a033546358a6a53b8a38b10e
title: Harvard Forest Snow Pillow since 2009

description: Water storage in snowpack is a key factor in the hydrological cycle of central New England. The Harvard Forest Snow Pillow provides continuous long-term measurements of the water content of snowpack (snow water equivalent) during the winter months. The snow pillow is located in a mature mixed hardwood stand with scattered conifers about 50 m north of the Nelson Brook Big Weir. For current data, please see: https://harvardforest.fas.harvard.edu/meteorological-hydrological-stations. For a complete set of archived data, please see: https://harvardforest.fas.harvard.edu/exist/apps/datasets/showData.html?id=HF155.
DOI: 10.6084/m9.figshare.14823582.v1
title: Temporal partitioning of diurnal bird and nocturnal small mammal visitors to a winter flowering endemic succulent

description: Floral nectar is an important attractant and reward for visitors, and is often produced in synchrony with peak activity of pollinators. <i>Aloe peglerae</i> flowers in winter, and previous studies have shown that it is pollinated primarily by diurnal generalist birds, with small mammals making additional contributions to pollination at night. Nectar produced during the day is the main attractant and reward for birds, but the nectar rewards available to small mammals are unknown. This paper investigates nectar availability in <i>Aloe peglerae</i>, because small mammals may be feeding on remaining, or freshly produced, nectar at night. Nectar availability over a 24-hour period was measured in screened and unscreened plants (<i>n</i> = ten plants per treatment), and the associated partitioning of visits by diurnal birds and nocturnal small mammals assessed. Nectar is constantly available over 24-hours, but in different quantities. Nectar volume of screened (nectar availability) and unscreened (standing crop) plants, is significantly higher early in the morning after sunrise, compared with all other sampling periods during the 24-hour period. Nectar concentration did not vary over 24-hours, averaging 11.5 ± 0.4% w/w (unscreened) across the entire 24-hour period. Peaks in visits by different guilds occurred at periods (i.e. diurnal birds and nocturnal small mammals) when nectar availability was high. <i>Aloe peglerae</i> has higher daytime nectar production, when its primary pollinators are most active, but the continual, albeit reduced, nectar availability at night attracts small mammals. Mobile diurnal birds, and less-mobile nocturnal small mammals, both rely on this nectar resource during dry and cold South African winters and, in turn, are important pollinators for this Critically Endangered <i>Aloe</i> species.
DOI: 10.6084/m9.figshare.14823591
title: Mykrobe panel typhi version 20210322

description: This is typhi panel data version 20210322, to be used by the command line tool mykrobe
DOI: 10.6084/m9.figshare.14823591.v1
title: Mykrobe panel typhi version 20210322

description: This is typhi panel data version 20210322, to be used by the command line tool mykrobe
DOI: 10.6084/m9.figshare.14823566.v1
title: OPN results from Topological analysis of differential effects of ketamine and propofol anaesthesia on brain dynamics

description: Research has found that the vividness of conscious experience is related to brain dynamics. Despite both being anaesthetics, propofol and ketamine produce different subjective states: we explore the different effects of these two anaesthetics on the structure of dynamic attractors reconstructed from electrophysiological activity recorded from cerebral cortex of two macaques. We used two methods: the first embeds the recordings in a continuous high-dimensional manifold on which we use topological data analysis to infer the presence of higher-order dynamics. The second reconstruction, an ordinal partition network embedding, allows us to create a discrete state-transition network, which is amenable to information-theoretic analysis and contains rich information about state-transition dynamics. We find that the awake condition generally had the ‘richest’ structure, visiting the most states, the presence of pronounced higher-order structures, and the least deterministic dynamics. By contrast, the propofol condition had the most dissimilar dynamics, transitioning to a more impoverished, constrained, low-structure regime. The ketamine condition, interestingly, seemed to combine aspects of both: while it was generally less complex than the awake condition, it remained well above propofol in almost all measures. These results provide deeper and more comprehensive insights than what is typically gained by using point-measures of complexity.
DOI: 10.6084/m9.figshare.14823557.v1
title: PHom results from Topological analysis of differential effects of ketamine and propofol anaesthesia on brain dynamics

description: Research has found that the vividness of conscious experience is related to brain dynamics. Despite both being anaesthetics, propofol and ketamine produce different subjective states: we explore the different effects of these two anaesthetics on the structure of dynamic attractors reconstructed from electrophysiological activity recorded from cerebral cortex of two macaques. We used two methods: the first embeds the recordings in a continuous high-dimensional manifold on which we use topological data analysis to infer the presence of higher-order dynamics. The second reconstruction, an ordinal partition network embedding, allows us to create a discrete state-transition network, which is amenable to information-theoretic analysis and contains rich information about state-transition dynamics. We find that the awake condition generally had the ‘richest’ structure, visiting the most states, the presence of pronounced higher-order structures, and the least deterministic dynamics. By contrast, the propofol condition had the most dissimilar dynamics, transitioning to a more impoverished, constrained, low-structure regime. The ketamine condition, interestingly, seemed to combine aspects of both: while it was generally less complex than the awake condition, it remained well above propofol in almost all measures. These results provide deeper and more comprehensive insights than what is typically gained by using point-measures of complexity.
DOI: 10.6084/m9.figshare.14823582
title: Temporal partitioning of diurnal bird and nocturnal small mammal visitors to a winter flowering endemic succulent

description: Floral nectar is an important attractant and reward for visitors, and is often produced in synchrony with peak activity of pollinators. <i>Aloe peglerae</i> flowers in winter, and previous studies have shown that it is pollinated primarily by diurnal generalist birds, with small mammals making additional contributions to pollination at night. Nectar produced during the day is the main attractant and reward for birds, but the nectar rewards available to small mammals are unknown. This paper investigates nectar availability in <i>Aloe peglerae</i>, because small mammals may be feeding on remaining, or freshly produced, nectar at night. Nectar availability over a 24-hour period was measured in screened and unscreened plants (<i>n</i> = ten plants per treatment), and the associated partitioning of visits by diurnal birds and nocturnal small mammals assessed. Nectar is constantly available over 24-hours, but in different quantities. Nectar volume of screened (nectar availability) and unscreened (standing crop) plants, is significantly higher early in the morning after sunrise, compared with all other sampling periods during the 24-hour period. Nectar concentration did not vary over 24-hours, averaging 11.5 ± 0.4% w/w (unscreened) across the entire 24-hour period. Peaks in visits by different guilds occurred at periods (i.e. diurnal birds and nocturnal small mammals) when nectar availability was high. <i>Aloe peglerae</i> has higher daytime nectar production, when its primary pollinators are most active, but the continual, albeit reduced, nectar availability at night attracts small mammals. Mobile diurnal birds, and less-mobile nocturnal small mammals, both rely on this nectar resource during dry and cold South African winters and, in turn, are important pollinators for this Critically Endangered <i>Aloe</i> species.