cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34808/mnyx-7455
title: Impact of binary mixtures of ketoprofen and diclofenac on the germination of Sorghum bicolor (sorgo) seeds

description: Research was carried out for various ratios of the previously determined EC50 values for mixture of ketoprofen and diclofenac, the first substance at 100% of its EC50 concentration was mixed with the second substance at 100% of its EC50 concentration, or the first substance at 50% of its EC50 concentration was mixed with the second substance at 150% of its EC50 concentration. Distilled water was used as the control, and individual pharmaceuticals at 50, 100, and 150% of their EC50 concentrations were also studied to confirm the test validity. All studies were performed in duplicate, except for the EC50 determination research, in which studies were performed in triplicates; ten S. bicolor seeds were used for each experiment. As already stated, after a 3-day incubation period, the root length was measured, and the growth inhibition was calculated.
The data sets include photos of sorghum seed plates with ketoprofen and diclofenac solutions  at appropriate levels according to the publication, and corresponding excel files with data on the length of germinated seeds (using Jimage graphical software) in two replicates, as well as controls.
Studies were conducted between 2017.These results are part of the manuscript published in Science of the Total Environment
https://doi.org/10.1007/s11356-018-2049-4
DOI: 10.15468/dl.zrxq3c
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Camissonia cheiranthifolia Hornem. ex Spreng."
 ]
}

 The dataset includes 11 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0062847-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.66r2dj
title: Occurrence Download

description: A dataset containing 2179880 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "ClassKey is one of (Elasmobranchii)"
 ]
}

 The dataset includes 2179880 records from 881 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0275554-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24190920
title: Supplementary Material for: A Novel Presentation of Autoimmune Hepatitis with IgG1 Elevation

description: Autoimmune hepatitis (AIH) is a common and debilitating pathology that has acute, subacute, and chronic presentation, requiring prompt diagnosis and early intervention. Several serologic markers are found to be associated with the pathogenesis and progression of autoimmune hepatitis, most notably antinuclear antibodies (ANA) and anti-smooth muscle antibodies (ASMA) [1.] In addition, AIH is also characterized by the elevation of gamma globulin levels, mainly immunoglobulin G (IgG) [2.] Although the literature has well established the presence of increased IgG levels in AIH, few studies have evaluated the subtypes of IgG and their differential levels associated with AIH. Here, we present a rare case of AIH that lacks the common serologic markers but instead reveals an elevation in IgG1 level. Our patient was subsequently placed on corticosteroids, and her symptoms quickly resolved. We intend to introduce this case to the medical community in the hope of aiding in the proper diagnosis and timely intervention of subsequent cases with similar presentations.
DOI: 10.6084/m9.figshare.24190920.v1
title: Supplementary Material for: A Novel Presentation of Autoimmune Hepatitis with IgG1 Elevation

description: Autoimmune hepatitis (AIH) is a common and debilitating pathology that has acute, subacute, and chronic presentation, requiring prompt diagnosis and early intervention. Several serologic markers are found to be associated with the pathogenesis and progression of autoimmune hepatitis, most notably antinuclear antibodies (ANA) and anti-smooth muscle antibodies (ASMA) [1.] In addition, AIH is also characterized by the elevation of gamma globulin levels, mainly immunoglobulin G (IgG) [2.] Although the literature has well established the presence of increased IgG levels in AIH, few studies have evaluated the subtypes of IgG and their differential levels associated with AIH. Here, we present a rare case of AIH that lacks the common serologic markers but instead reveals an elevation in IgG1 level. Our patient was subsequently placed on corticosteroids, and her symptoms quickly resolved. We intend to introduce this case to the medical community in the hope of aiding in the proper diagnosis and timely intervention of subsequent cases with similar presentations.
DOI: 10.24403/jp.1335528
title: Der Einfluss von externen Faktoren auf die Entwicklung von jungen Talenten im Nachwuchsfußball: Ein Scoping Review / Daniel Panzer, Michael Fuchs, Christian Knoll & Gregor Hovemann
DOI: 10.24403/jp.1335529
title: Ist-Analyse der Merkmale der Personen im Top-Management im deutschen Profifußball / Matthias Dombrowski, Gregor Hovemann, Alexander Hodeck & Henning Bindzus
DOI: 10.6084/m9.figshare.24125436.v1
title: Supplementary Material for: DNA methylation pattern in somatotroph pituitary neuroendocrine tumors

description: Introduction. Growth hormone secretion by sporadic somatotroph neuroendocrine pituitary tumors (PitNETs) is major cause of acromegaly. These tumors are relatively heterogenous in terms of histopathological and molecular features. Our previous transcriptomic profiling of somatotroph tumors revealed three distinct molecular subtypes. This study was aimed to investigate difference in DNA methylation pattern in subtypes of somatotroph PitNETs and its role in distinctive gene expression. Methods. Genome-wide DNA methylation was investigated in 48 somatotroph PitNETs with EPIC microarrays. Gene expression was assessed with RNAseq. Bisulfite pyrosequencing and qRT-PCR were used for verifying results of DNA methylation and gene expression. Results. Clustering tumor samples based on methylation data reflected the transcriptome-related classification. Subtype 1 tumors are densely granulated without GNAS mutation, characterized by high expression of NR5A1 (SF-1) and GIPR. The expression of both genes is correlated with specific methylation of gene body and promoter. This subtype has lower methylation level of 5’ gene regions and CpG islands than the remaining tumors. Subtype 2 PitNETs are densely granulated, frequently GNAS-mutated while those in subtype 3 are mainly sparsely granulated. Methylation/expression analysis indicates that ~50% genes located in differentially methylated regions are those differentially expressed between tumor subtypes. Correlation analysis revealed DNA methylation-controlled genes including CDKN1B, CCND2, EBF3, CDH4, CDH12, MGMT, STAT5A, PLXND1, PTPRE, MMP16 and genes encoding ion channels and semaphorins. Conclusion. DNA methylation profiling confirmed the existence of three molecular subtypes of somatotroph PitNETs. High expression of NR5A1 and GIPR in subtype 1 tumors is correlated with specific methylation of both genes.
DOI: 10.5281/zenodo.8386811
title: cymathaere_triplicata_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.8386810
title: cymathaere_triplicata_spades_01.fasta.gz

description: .
DOI: 10.6084/m9.figshare.24041952.v1
title: Supplementary Material for: Development and validation of a nomogram for predicting all-cause mortality in patients with hemodialysis having pulmonary hypertension

description: Introduction: Patients with end-stage renal disease receiving hemodialysis (HD) have a high morbidity and mortality rate associated with pulmonary hypertension (PH). A nomogram was developed to predict all-cause mortality in HD patients with PH. In this study, we aimed to validate the usefulness of this nomogram. Methods: A total of 274 HD patients with PH were hospitalized at the Affiliated Hospital of Xuzhou Medical University between January 2014 and June 2019 and followed up for 3 years. Echocardiography detected PH when the peak tricuspid regurgitation velocity (TRV) was more than 2.8 m/s. To evaluate the all-cause mortality for long-term HD patients with PH, Cox regression analysis was performed to determine the factors of mortality that were included in the prediction model. Next, the area under the receiver-operating characteristic curve (AUC-ROC) was used to assess the predictive power of the model. Calibration plots and decision curve analysis (DCA) were used to assess the accuracy of the prediction results and the clinical utility of the model. Results: The all-cause mortality rate was 29.1% throughout the follow-up period. The nomogram comprised six commonly available predictors: age, diabetes mellitus, cardiovascular disease, hemoglobin, left ventricular ejection fraction, and TRV. The 1-year, 2-year, and 3-year AUC-ROC values were 0.842, 0.800, and 0.781, respectively. The calibration curves revealed an excellent agreement with the nomogram, while the DCA demonstrated favorable clinical practicability. Conclusion: The first developed nomogram for predicting all-cause mortality in HD patients with PH could guide clinical decision-making and intervention planning.
DOI: 10.5281/zenodo.8251529
title: Dataset_How Halides Alloying Influences the Optoelectronic Quality in Tin-Halide Perovskite Solar Absorbers_BOLLA_v1

description: The dataset contains the raw data used in the publications: How Halides Alloying Influences the Optoelectronic Quality in Tin-Halide Perovskite solar Absorbers. More specifically it contains the main photovoltaic parameters used to plot the statistic of solar cells, the photothermal deflection spectroscopy data with respective linear fits and the transient absorption spectra.
DOI: 10.5281/zenodo.8251528
title: Dataset_How Halides Alloying Influences the Optoelectronic Quality in Tin-Halide Perovskite Solar Absorbers_BOLLA_v1

description: The dataset contains the raw data used in the publications: How Halides Alloying Influences the Optoelectronic Quality in Tin-Halide Perovskite solar Absorbers. More specifically it contains the main photovoltaic parameters used to plot the statistic of solar cells, the photothermal deflection spectroscopy data with respective linear fits and the transient absorption spectra.
DOI: 10.57745/7bnmcs
title: Concentration_fructose_G_GL_model_cakes.tab

description: :unav
DOI: 10.18462/iir.icr.2023.0264
title: Numerical investigation of an ammonia-water absorption-compression high-temperature heat pump for hot water and steam production in food processing.
DOI: 10.5281/zenodo.8386766
title: Dataset for all plots in journal 100Gbps PAM4 photodetector by Hemalatha-Tyndall

description: The excel file contains all the dataset for the plots included in journal article, '100 Gbps PAM4 ultra-thin photodetectors integrated on SOI platform by micro transfer printing'.
DOI: 10.6084/m9.figshare.24197778
title: XB_OMI_RECON_2013_2020.nc

description: Reconstructed Data For "Spatially and Temporally Coherent Reconstruction of Tropospheric NO2 over Northwestern China combining OMI and GOME-2B measurements", including "XB_OMI_RECON_2013_2020".Time: January 01, 2013 to December 31, 2020
DOI: 10.6084/m9.figshare.24197778.v1
title: XB_OMI_RECON_2013_2020.nc

description: Reconstructed Data For "Spatially and Temporally Coherent Reconstruction of Tropospheric NO2 over Northwestern China combining OMI and GOME-2B measurements", including "XB_OMI_RECON_2013_2020".Time: January 01, 2013 to December 31, 2020
DOI: 10.6084/m9.figshare.24197970.v2
title: MISR_data

description: MISR AOD and AAOD data
DOI: 10.6084/m9.figshare.24197970
title: MISR_data

description: MISR AOD and AAOD data
DOI: 10.57745/iccdgt
title: 20191024_18-055_9-2.mzXML

description: LC-MSMS Analysis of Staphylococcus aureus HG003 whole cell after 12hours WITHOUT Vancomycin. Biological replicate 'C'. SDS Fraction 2/2.
DOI: 10.57745/qtegjm
title: 20191024_18-055_2-1.mzXML

description: LC-MSMS Analysis of Staphylococcus aureus HG003 whole cell after 6hours WITHOUT Vancomycin. Biological replicate 'B'. SDS Fraction 1/2.
DOI: 10.57745/51skpg
title: 20191024_18-055_1-1.mzXML

description: LC-MSMS Analysis of Staphylococcus aureus HG003 whole cell after 6hours without Vancomycin. Biological replicate 'A'. SDS Fraction1/2.
DOI: 10.57745/6yw6a7
title: 20191024_18-055_1-2.mzXML

description: LC-MSMS Analysis of Staphylococcus aureus HG003 whole cell after 6hours without Vancomycin. Biological replicate 'A'. SDS Fraction2/2.
DOI: 10.57745/kifpdi
title: 20191024_18-055_2-2.mzXML

description: LC-MSMS Analysis of Staphylococcus aureus HG003 whole cell after 6hours WITHOUT Vancomycin. Biological replicate 'B'. SDS Fraction 2/2.
DOI: 10.57745/5vailw
title: 20191024_18-055_4-1.mzXML

description: LC-MSMS Analysis of Staphylococcus aureus HG003 whole cell after 6hours WITH Vancomycin. Biological replicate 'A'. SDS Fraction 1/2.
DOI: 10.6084/m9.figshare.24212361
title: Untitled Item Proportions of Four Distinct Classes of Sensory Neurons Are Retained Even When Axon Regeneration Is Enhanced Following Peripheral Nerve Injury

description: Data from Khan et al, "Proportions of Four Distinct Classes of Sensory Neurons Are Retained Even When Axon Regeneration Is Enhanced Following Peripheral Nerve Injury".
DOI: 10.57745/yqniol
title: 20191024_18-055_3-2.mzXML

description: LC-MSMS Analysis of Staphylococcus aureus HG003 whole cell after 6hours WITHOUT Vancomycin. Biological replicate 'C'. SDS Fraction 2/2.
DOI: 10.6084/m9.figshare.24212361.v1
title: Untitled Item Proportions of Four Distinct Classes of Sensory Neurons Are Retained Even When Axon Regeneration Is Enhanced Following Peripheral Nerve Injury

description: Data from Khan et al, "Proportions of Four Distinct Classes of Sensory Neurons Are Retained Even When Axon Regeneration Is Enhanced Following Peripheral Nerve Injury".
DOI: 10.57745/pvqans
title: HeatStress_TARGET.tab

description: :unav
DOI: 10.57745/k0ln1w
title: HeatStress_DiCoExpress.R

description: This script is used to analyse the data "HeatStress_COUNTS.csv". The source scripts can be found here : https://www.researchsquare.com/article/rs-10344/v2
DOI: 10.57745/qowxbw
title: HeatStress_Enrichment.tab

description: :unav
DOI: 10.57745/nsjwyl
title: HeatStress_COUNTS.csv

description: :unav
DOI: 10.57745/xkqjrr
title: HeatStress_Annotation.csv

description: :unav
DOI: 10.57745/hv5w46
title: HeatStress_[C_Res]-[C_Sens]_Top50_Clustering.pdf

description: :unav
DOI: 10.5281/zenodo.5178487
title: Dataset for demonstration of quantitative label-free imaging with phase and polarization

description: This zip file contains raw images of mouse brain slice and anisotropic glass target acquired with QLIPP. It also contains the configuration files to reconstruct the phase, retardance, and orientation from this data with the recOrder pipeline. The tutorial slides for using this dataset for reconstruction can be found here (10.5281/zenodo.5135889).
DOI: 10.5281/zenodo.6249285
title: Dataset for demonstration of quantitative label-free imaging with phase and polarization

description: The QLIPP_Reconstruction_Resources_20x.zip file contains raw images of mouse brain slice and anisotropic glass target acquired with QLIPP. The file also contains the configuration files to reconstruct the phase, retardance, and orientation from this data with the recOrder pipeline. The tutorial slides for using this dataset for reconstruction can be found here (10.5281/zenodo.5135889). The other two zip files are a subset of above used for automated testing of recOrder and waveOrder repositories.
DOI: 10.5281/zenodo.6941042
title: Dataset for demonstration of quantitative label-free imaging with phase and polarization

description: The QLIPP_Reconstruction_Resources_20x.zip file contains raw images of mouse brain slice and anisotropic glass target acquired with QLIPP. The file also contains the configuration files to reconstruct the phase, retardance, and orientation from this data with the recOrder pipeline. The tutorial slides for using this dataset for reconstruction can be found here (10.5281/zenodo.5135889). v1.1.0: Upload two zip files for automated testing of recOrder and waveOrder repositories. v1.2.0: add pycromanager dataset for testing the reader and converter in waveOrder.
DOI: 10.5281/zenodo.6983215
title: Dataset for demonstration of quantitative label-free imaging with phase and polarization

description: The QLIPP_Reconstruction_Resources_20x.zip file contains raw images of mouse brain slice and anisotropic glass target acquired with QLIPP. The file also contains the configuration files to reconstruct the phase, retardance, and orientation from this data with the recOrder pipeline. The tutorial slides for using this dataset for reconstruction can be found here (10.5281/zenodo.5135889). v1.1.0: Upload two zip files for automated testing of recOrder and waveOrder repositories. v1.2.0: add pycromanager dataset for testing the reader and converter in waveOrder. v1.3.0: reduce the size of recOrder test dataset
DOI: 10.5281/zenodo.5178486
title: Dataset for demonstration of quantitative label-free imaging with phase and polarization

description: The QLIPP_Reconstruction_Resources_20x.zip file contains raw images of mouse brain slice and anisotropic glass target acquired with QLIPP. The file also contains the configuration files to reconstruct the phase, retardance, and orientation from this data with the recOrder pipeline. The tutorial slides for using this dataset for reconstruction can be found here (10.5281/zenodo.5135889). v1.1.0: Upload two zip files for automated testing of recOrder and waveOrder repositories. v1.2.0: add pycromanager dataset for testing the reader and converter in waveOrder. v1.3.0: reduce the size of recOrder test dataset v 1.4.0: add datasets for new data schema defined for recOrder 0.4.0 v1.5.0: add a dataset that shows images of an embryo
DOI: 10.5281/zenodo.6983916
title: Dataset for demonstration of quantitative label-free imaging with phase and polarization

description: The QLIPP_Reconstruction_Resources_20x.zip file contains raw images of mouse brain slice and anisotropic glass target acquired with QLIPP. The file also contains the configuration files to reconstruct the phase, retardance, and orientation from this data with the recOrder pipeline. The tutorial slides for using this dataset for reconstruction can be found here (10.5281/zenodo.5135889). v1.1.0: Upload two zip files for automated testing of recOrder and waveOrder repositories. v1.2.0: add pycromanager dataset for testing the reader and converter in waveOrder. v1.3.0: reduce the size of recOrder test dataset
DOI: 10.5281/zenodo.8280720
title: Dataset for demonstration of quantitative label-free imaging with phase and polarization

description: The QLIPP_Reconstruction_Resources_20x.zip file contains raw images of mouse brain slice and anisotropic glass target acquired with QLIPP. The file also contains the configuration files to reconstruct the phase, retardance, and orientation from this data with the recOrder pipeline. The tutorial slides for using this dataset for reconstruction can be found here (10.5281/zenodo.5135889). v1.1.0: Upload two zip files for automated testing of recOrder and waveOrder repositories. v1.2.0: add pycromanager dataset for testing the reader and converter in waveOrder. v1.3.0: reduce the size of recOrder test dataset v 1.4.0: add datasets for new data schema defined for recOrder 0.4.0
DOI: 10.5281/zenodo.8386856
title: Dataset for demonstration of quantitative label-free imaging with phase and polarization

description: The QLIPP_Reconstruction_Resources_20x.zip file contains raw images of mouse brain slice and anisotropic glass target acquired with QLIPP. The file also contains the configuration files to reconstruct the phase, retardance, and orientation from this data with the recOrder pipeline. The tutorial slides for using this dataset for reconstruction can be found here (10.5281/zenodo.5135889). v1.1.0: Upload two zip files for automated testing of recOrder and waveOrder repositories. v1.2.0: add pycromanager dataset for testing the reader and converter in waveOrder. v1.3.0: reduce the size of recOrder test dataset v 1.4.0: add datasets for new data schema defined for recOrder 0.4.0 v1.5.0: add a dataset that shows images of an embryo
DOI: 10.57745/xnmfwy
title: HeatStress_Raw_pvalues_histograms.pdf

description: :unav
DOI: 10.25380/iastate.24185784.v1
title: Diversity Array Technology based genetic polymorphism data of maize inducer and noninducer lines

description: Inducer lines are a critical component of the maize Doubled Haploid (DH) technology, which allows for the rapid development of homozygous inbred lines, saving time and resources. Here, we present a dataset of genetic polymorphisms of a diverse panel of 159 North American and European haploid inducers, genotyped with the Diversity Array Sequencing Technology (DArTseq). We also present a dataset of genetic polymorphisms of a panel of 793 noninducer maize genotypes, which were genotyped with the Diversity Array Sequencing Technology (DArTseq) too. The inducer panel was employed for a quantitative Genome-Wide Association Study (GWAS) analysis, whereas the inducer and noninducer panels were jointly employed for a case-control GWAS. A total of 9007 Single Nucleotide Polymorphism (SNP) markers were employed for both GWAS. The haploid induction rate (HIR) of each inducer was accessed across two planting dates (Trentin et al. 2023). Lack of significant induction ability in the panel of non-inducer genotypes was assumed, and verified by growing them in the field, were no haploid plants were observed. This is in accordance with Chase's (1947) observation that the occurrence of haploid plants in elite inbred lines happens at very low frequencies (&lt;0.1%) (Trentin et al. 2023). Genetic diversity among inducer lines is essential for creating new haploid-inducer lines and enhancing the efficiency of DH line production. We invite the scientific community to access and utilize this dataset, which holds significance for developing next generation haploid inducers. This data can be used further in SNP based- or haplotype based-GWAS and genomic selection (GS). Sharing this genetic polymorphism data in a public repository will facilitate collaboration, accelerate research, and contribute to the advancing maize research and breeding.
DOI: 10.57745/tsk4m7
title: HeatStress_[Res]-[sens]_DEG.BH.txt

description: :unav
DOI: 10.57745/lvuoch
title: HeatStress_[S_Res]-[S_Sens]_Top20_Profile.pdf

description: :unav
DOI: 10.25345/c51834c85
title: MassIVE MSV000092995 - Generation and Characterization of a Monoclonal Antibody Against an African Swine Fever Virus Protein Encoded by the A137R Gene
title: The ongoing African swine fever (ASF) pandemic continues to have a major impact on global pork production and trade. Since ASF cannot be distinguished from other swine hemorrhagic fevers clinically, ASF-specific laboratory diagnosis is critical. Thus ASF virus (ASFV)-specific monoclonal antibodies (mAbs) are critical for the development of laboratory diagnostics. In this study, we report one ASFV-specific mAb, F88ASF-55, that was generated and characterized. A proteomic approach was performed to determine the sequence identities of the protein band (14 kDa) recognized by F88ASF-55. The stained protein band was excised, digested, and analyzed by LC-MS/MS. A total of 10 exclusive unique peptides and 15 exclusive unique spectra were identified (data not shown). The amino acid coverage (88/137) of the structural protein encoded by A137R was 64.2%. The results confirmed that the mAb-binding epitope is located on the protein encoded by A137R (formerly known as p11.5). Epitope mapping results revealed a highly conserved linear epitope recognized by this mAb, corresponding to amino acids 111-125 of pA137R.