cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.9crqzx
title: Occurrence Download

description: A dataset containing 95 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "StateProvince is one of (Vermont, Maine, New Hampshire, New York)",
 "TaxonKey is Calamagrostis canadensis var. langsdorffii (Link) Inman"
 ]
}

 The dataset includes 95 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005080-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.27991574
title: EPI-Clone dataset X.1 : Targeted DNAm+DNA+RNA-seq from CD34+ BM cells of a healthy donor

description: This is dataset supports parts of the EPI-Clone manuscript. Here, targeted single cell methylation profiling (scTAMseq) was combined with targeted RNA-seq from the same cells (SDR-seq) to profile CD34+ cells from bone marrow of a healthy 51-year old male individual.Dataset is a seurat (v5) object with the following assays, reductions and metadata:<br><b>ASSAYS:</b><br>RNA: RNA expression data for 120 target genesDNAm: DNA methylation data, containing binary observations (0: amplicon not observed, i.e. dropout or absence of DNA methylation, 1: amplicon observed, i.e. DNA methylation). See the paper on scTAMseq<b>DIMENSIONALITY REDUCTION</b>pca, dynapca: PCA performed on all methylome data, or on consensus dynamic CpGs onlyumap, dynaumap: UMAP computed on all methylome data, or on consensus dynamic CpGs onlyprojected: Methylome data projected on the reference CD34+ UMAP coordinate (add DOI!)rnapca: PCA performed on RNA datarnaumap: PCA performed on RNA dataFor strategies how to obtain dimensionality reduction that reflect clonal identity, please see the github page accompanying the manuscript.<b>METADATA</b>nFeature_RNA, nFeature_DNAm, nFeature_NonHhaI: Number of RNA , DNAm and genotypoing amplicons observedprojected.cluster: Cell type, according to DNA methylation based projection on the CD34+ referenceCellType_rna: Cell type annotation according to RNA expressionCountsChrY: Y chromosome read countsEPIclone_id: Clone, according to EPI-clone algorithm
DOI: 10.17866/rd.salford.7370822
title: FLUXUoS - The Library Happening 2 July 2018

description: <strong>FLUXUoS!</strong><strong><br></strong>

In an experimental
collaboration between the Clifford Whitworth Library and the University of
Salford’s Comedy Course, a re-enactment of some of the comedic, performative
artwork of the 1960’s neo-Dadaist group Fluxus, "happened" at 13.00 hours on
the ground floor of the library on Monday 2<sup>nd</sup> July 2018. Some hitherto suppressed connections between
comedy and art were revealed within this live research
provocation. Meanwhile, the library’s collection of material on the 1960s,
counter culture, performance, art and anti-art, comedy, audiences, and practice
as research provided a vivid backdrop for the skits and hoaxes that were recreated by a team of comedy staff and student Fluxus fans.<br>The performers were:<br>Dr Ian Wilkie as John CageDr Richard Talbot as George Maciunas (with eye patch)Adam Forbes as Allan Kaprow (with beard)







Will Andrews as Emmett WilliamsAndDr Lynne Crook as The Interrupter<br>Original idea and script by Dr Ian Wilkie, Lecturer in Performance<br>Photographs by Bill Ayres, The Library
DOI: 10.17866/rd.salford.7370822.v1
title: FLUXUoS - The Library Happening 2 July 2018

description: <strong>FLUXUoS!</strong><strong><br></strong>

In an experimental
collaboration between the Clifford Whitworth Library and the University of
Salford’s Comedy Course, a re-enactment of some of the comedic, performative
artwork of the 1960’s neo-Dadaist group Fluxus, "happened" at 13.00 hours on
the ground floor of the library on Monday 2<sup>nd</sup> July 2018. Some hitherto suppressed connections between
comedy and art were revealed within this live research
provocation. Meanwhile, the library’s collection of material on the 1960s,
counter culture, performance, art and anti-art, comedy, audiences, and practice
as research provided a vivid backdrop for the skits and hoaxes that were recreated by a team of comedy staff and student Fluxus fans.<br>The performers were:<br>Dr Ian Wilkie as John CageDr Richard Talbot as George Maciunas (with eye patch)Adam Forbes as Allan Kaprow (with beard)







Will Andrews as Emmett WilliamsAndDr Lynne Crook as The Interrupter<br>Original idea and script by Dr Ian Wilkie, Lecturer in Performance<br>Photographs by Bill Ayres, The Library
DOI: 10.34945/f5cc8t
title: Assessment of Spinal DNA Damage Following L1 Contusion Spinal Cord Injury in Female C57Bl/6 Mice

description: STUDY PURPOSE: Assessing the presence, timing, and spinal location of DNA damage following spinal cord injury. DATA COLLECTED: 12-week-old female C57Bl/6 mice received a 75 kdyne contusion at spinal L1, were Sham-operated, or remained naive. At 1 hour post-injury (hpi), 1 day post-injury (dpi), 3 dpi, 7 dpi, and 28 dpi the mice were sacrificed (n = 6-10 per group). 

Histological analysis of the spinal cord was performed on longitudinal sections of the spinal cord. DNA damage was labeled using gamma-H2AX, neurons by NeuN labeling, Caspase-3 mediated apoptosis by Cleaved Caspase-3 labeling, and cell nuclei using DAPI. Imaging was performed on a Zeiss Axioscan using the 647, 488, and DAPI channels. 

Automatic analysis was performed using QuPath software. By thresholding, cells/neurons with gamma-H2AX foci (DNA-damaged cells), pan nuclear gamma-H2AX signal (cells with early cell death), and negative gamma-H2AX signal were identified and counted. DATA USAGE NOTES:
DOI: 10.5281/zenodo.13730203
title: Knowledge Graph Triple Validation by LLMs and Human-in-the-Loop

description: Suplementary material for the sumbitted article to the IPM Special issue on Large Language Models and Data Quality for Knowledge Graphs. 

The dataset is an extension of [1] and includes the following columns:



subj the subject/head of the triple

rel the predicate of the triple

obj the object/tail of the triple

support-level indicating the reliability of the triple

ann-random[1: valid, 0: invalid], randomly selected annotation from the expert annotations avaialble in [1] 

ann-new [1: valid, 0: invalid], junior expert annotation 

gpt-4o-1 [1: valid, 0: invalid], response from 1st GPT prompt

gpt-4o-2 [1: valid, 0: invalid], response from 2nd GPT prompt

gpt-4o-3 [1: valid, 0: invalid], response from 3rd GPT prompt

gpt-4o-majority [1: valid, 0: invalid], GPT annotation, computed as majority vote of gpt-4o-1,gpt-4o-2,gpt-4o-3

claude-1 [1: valid, 0: invalid], response from 1st claude prompt

claude-2 [1: valid, 0: invalid], response from 2nd claude prompt

claude-3 [1: valid, 0: invalid], response from 3rd claude prompt

claude-majority [1: valid, 0: invalid], claude annotation, computed as majority vote of claude-1,claude-2,claude-3

llama-1 [1: valid, 0: invalid], response from 1st llama prompt

llama-2 [1: valid, 0: invalid], response from 2nd llama prompt

llama-3 [1: valid, 0: invalid], response from 3rd llama prompt

llama-majority [1: valid, 0: invalid], llama annotation, computed as majority vote of llama-1,llama-2,llama-3


[1] https://github.com/danilo-dessi/SKG-pipeline/tree/main/eval
DOI: 10.5281/zenodo.13730204
title: Knowledge Graph Triple Validation by LLMs and Human-in-the-Loop

description: Suplementary material for the sumbitted article to the IPM Special issue on Large Language Models and Data Quality for Knowledge Graphs. 

The dataset is an extension of [1] and includes the following columns:



subj the subject/head of the triple

rel the predicate of the triple

obj the object/tail of the triple

support-level indicating the reliability of the triple

gpt-4o-1 [1: valid, 0: invalid], response from 1st GPT prompt

gpt-4o-2 [1: valid, 0: invalid], response from 2nd GPT prompt

gpt-4o-3 [1: valid, 0: invalid], response from 3rd GPT prompt

gpt-4o-majority [1: valid, 0: invalid], GPT annotation, computed as majority vote of gpt-4o-1,gpt-4o-2,gpt-4o-3

ann-random[1: valid, 0: invalid], randomly selected annotation from the expert annotations avaialble in [1] 

ann-new [1: valid, 0: invalid], junior expert annotation 


[1] https://github.com/danilo-dessi/SKG-pipeline/tree/main/eval
DOI: 10.5281/zenodo.14887988
title: Knowledge Graph Triple Validation by LLMs and Human-in-the-Loop

description: Suplementary material for the sumbitted article to the IPM Special issue on Large Language Models and Data Quality for Knowledge Graphs. 

The dataset is an extension of [1] and includes the following columns:



subj the subject/head of the triple

rel the predicate of the triple

obj the object/tail of the triple

support-level indicating the reliability of the triple

ann-random[1: valid, 0: invalid], randomly selected annotation from the expert annotations avaialble in [1] 

ann-new [1: valid, 0: invalid], junior expert annotation 

gpt-4o-1 [1: valid, 0: invalid], response from 1st GPT prompt

gpt-4o-2 [1: valid, 0: invalid], response from 2nd GPT prompt

gpt-4o-3 [1: valid, 0: invalid], response from 3rd GPT prompt

gpt-4o-majority [1: valid, 0: invalid], GPT annotation, computed as majority vote of gpt-4o-1,gpt-4o-2,gpt-4o-3

claude-1 [1: valid, 0: invalid], response from 1st claude prompt

claude-2 [1: valid, 0: invalid], response from 2nd claude prompt

claude-3 [1: valid, 0: invalid], response from 3rd claude prompt

claude-majority [1: valid, 0: invalid], claude annotation, computed as majority vote of claude-1,claude-2,claude-3

llama-1 [1: valid, 0: invalid], response from 1st llama prompt

llama-2 [1: valid, 0: invalid], response from 2nd llama prompt

llama-3 [1: valid, 0: invalid], response from 3rd llama prompt

llama-majority [1: valid, 0: invalid], llama annotation, computed as majority vote of llama-1,llama-2,llama-3


[1] https://github.com/danilo-dessi/SKG-pipeline/tree/main/eval
DOI: 10.5525/gla.researchdata.1924
title: The Application of Supported Palladium Catalysts for the Liquid Phase Hydrogenation of Benzaldehyde
DOI: 10.17866/rd.salford.6901475
title: Making Sense Of Sounds: Data for the machine learning challenge 2018

description: These are the datasets for the Making Sense Of Sounds challenge 2018. The Development download contains the following:<br>* Folder 'Development' with 1500 audio files, divided equally into five category subfolders: Music, Human, Nature, Effects, and Urban.<br>* File 'Logsheet_Development.csv, a listing of every file, plus their category, and event type. <br><br><br>The Evaluation download contains the following:<br>* Folder 'Evaluation' with 500 audio files, not further allocated to any subfolders.<br>* File 'Logsheet_Evaluation.csv', a listing of all files in the Evaluation dataset.<br>It should be assumed that all files in this challenge are
provided under the licence CC-BY-NC 4.0 (Creative Commons, Attribution
Noncommercial<sup>1</sup>).
This is the most restrictive licence of any file in the dataset, though some
were also provided under CC0<sup>2</sup> and CC-BY<sup>3</sup>.
A complete listing of the exact licences and author attributions is contained in 'MSoS_challenge_2018_File_credits_Usage_info_v1-00.zip', <br>V4 is the latest version of this repository, making the file 'Logsheet_EvaluationMaster.csv' available for download. This matches the format of 'Logsheet_Development.csv' which accompanies the Development dataset. Together these two logsheet files make it possible to check both the main category and the sound event type for every file in the challenge dataset. <br><br>See the challenge home page for full details about the dataset and challenge results:http://cvssp.org/projects/making_sense_of_sounds/site/challenge<br><br><br>References:1) https://creativecommons.org/licenses/by-nc/4.0/2) https://creativecommons.org/publicdomain/zero/1.0/ 3) https://creativecommons.org/licenses/by/4.0/<br>
DOI: 10.17866/rd.salford.6901475.v3
title: Making Sense Of Sounds: Data for the machine learning challenge 2018

description: These are the datasets for the Making Sense Of Sounds challenge 2018. The Development download contains the following:<br>* Folder 'Development' with 1500 audio files, divided equally into five category subfolders: Music, Human, Nature, Effects, and Urban.<br>* File 'Logsheet_Development.csv, a listing of every file, plus their category, and event type. <br><br><br>The Evaluation download contains the following:<br>* Folder 'Evaluation' with 500 audio files, not further allocated to any subfolders.<br>* File 'Logsheet_Evaluation.csv', a listing of all files in the Evaluation dataset.<br>It should be assumed that all files in this challenge are
provided under the licence CC-BY-NC 4.0 (Creative Commons, Attribution
Noncommercial<sup>1</sup>).
This is the most restrictive licence of any file in the dataset, though some
were also provided under CC0<sup>2</sup> and CC-BY<sup>3</sup>.
A complete listing of the exact licences and author attributions is contained in 'MSoS_challenge_2018_File_credits_Usage_info_v1-00.zip', <br>See the challenge home page for full details about the dataset and challenge results:http://cvssp.org/projects/making_sense_of_sounds/site/challenge<br><br><br>References:1) https://creativecommons.org/licenses/by-nc/4.0/2) https://creativecommons.org/publicdomain/zero/1.0/ 3) https://creativecommons.org/licenses/by/4.0/<br>
DOI: 10.5281/zenodo.15013331
title: First detection and entomological characterisation of invasive malaria vector Anopheles stephensi in sympatry with other vectors in southern Niger Republic

description: Original files data set from amplification of fragments of cytochrome oxidase I and internal transcribed spacer region 2 genes from the invasive malaria vector, Anopheles stephensi collected in southern Niger Republic.
DOI: 10.5281/zenodo.15013332
title: First detection and entomological characterisation of invasive malaria vector Anopheles stephensi in sympatry with other vectors in southern Niger Republic

description: Original files data set from amplification of fragments of cytochrome oxidase I and internal transcribed spacer region 2 genes from the invasive malaria vector, Anopheles stephensi collected in southern Niger Republic.
DOI: 10.17866/rd.salford.7409564.v1
title: Item 3. Action Space - Research Timeline

description: Timeline of overall Action Space research project
DOI: 10.17866/rd.salford.7409564
title: Item 3. Action Space - Research Timeline

description: Timeline of overall Action Space research project
DOI: 10.5281/zenodo.15013400
title: supplementary data
DOI: 10.5281/zenodo.15013401
title: supplementary data
DOI: 10.6084/m9.figshare.28582631
title: West Virginia Largemouth Bass Datasets

description: This resulting dataset was used to investigate population structuring and genomic diversity of largemouth bass in the state of West Virginia
DOI: 10.6084/m9.figshare.28582631.v1
title: West Virginia Largemouth Bass Datasets

description: This resulting dataset was used to investigate population structuring and genomic diversity of largemouth bass in the state of West Virginia
DOI: 10.17866/rd.salford.7409519
title: Item 5. Action Space - Impact

description: List of awards, screenings, media coverage and recognition for the film Action Space.<br><b>Action Space film - Impact:</b><br><b>Featured In:</b><br>The Film Programme, Radio 4, broadcast 24/04/2016<br>The Wire magazine, January 2017 issueSight and Sound magazine, September 2016 issue<br><b>Awards: </b><br>Winner of Prix Filaf d'Argent - FILAF 2016, The International Art Book and Film Festival - Friday 24th June 2016, Perpignan, FR<br>2nd Prize - Big Smoke. A Mention In Honor To The London-Based Creative Industry.Krafta International Art Making Film Festival - September 28th 2017, The Lighthouse, Glasgow, UK<b><br></b><b>Screenings and Events:</b><br>Krafta International Art Making Film Festival - September 28th 2017, The Lighthouse, Glasgow, UKFILAF 2016, The International Art Book and Film Festival - 24th June 2016, Perpignan, FRFlatpack Film Festival - 23rd April 2016, Birmingham, UKLeeds International Film Festival - November 10th 2016, The Tetley, Leeds, UKFIAC, Paris Contemporary Art Fair - October 22nd 2016, Paris, FRAbacus Exhibition, Bluecoat Gallery July - October 2017, Liverpool, UKSheffield Hallam University, Gravity Lecture Series - February 9th 2017, UKSomerset House, Utopia Think Tank Weekend –, January 21st 2017, London, UKRegent Street Cinema - 14th December 2016, London, UKPutting Space into Action Symposium, Huddersfield University- Friday 30th September 2016,UK<br>For more information on the film Action Space please see http://www.hctwahl.com/as/index.html<br>
DOI: 10.17866/rd.salford.7409519.v1
title: Item 5. Action Space - Impact

description: List of awards, screenings, media coverage and recognition for the film Action Space.<br><b>Action Space film - Impact:</b><br><b>Featured In:</b><br>The Film Programme, Radio 4, broadcast 24/04/2016<br>The Wire magazine, January 2017 issueSight and Sound magazine, September 2016 issue<br><b>Awards: </b><br>Winner of Prix Filaf d'Argent - FILAF 2016, The International Art Book and Film Festival - Friday 24th June 2016, Perpignan, FR<br>2nd Prize - Big Smoke. A Mention In Honor To The London-Based Creative Industry.Krafta International Art Making Film Festival - September 28th 2017, The Lighthouse, Glasgow, UK<b><br></b><b>Screenings and Events:</b><br>Krafta International Art Making Film Festival - September 28th 2017, The Lighthouse, Glasgow, UKFILAF 2016, The International Art Book and Film Festival - 24th June 2016, Perpignan, FRFlatpack Film Festival - 23rd April 2016, Birmingham, UKLeeds International Film Festival - November 10th 2016, The Tetley, Leeds, UKFIAC, Paris Contemporary Art Fair - October 22nd 2016, Paris, FRAbacus Exhibition, Bluecoat Gallery July - October 2017, Liverpool, UKSheffield Hallam University, Gravity Lecture Series - February 9th 2017, UKSomerset House, Utopia Think Tank Weekend –, January 21st 2017, London, UKRegent Street Cinema - 14th December 2016, London, UKPutting Space into Action Symposium, Huddersfield University- Friday 30th September 2016,UK<br>For more information on the film Action Space please see http://www.hctwahl.com/as/index.html<br>
DOI: 10.17866/rd.salford.7346894
title: HS Action Together

description: Varied resources from the Millions Hiding HS exhibit and display as part of the Community Science Showcase during GameLab. This event was part of Manchester Science Festival 2018, hosted at the University of Salford Library, MediaCityUK campus.<br>Please note, the zipped resource pack contains multilingual versions of the resources in: English, Spanish, Italian, Danish, French, Dutch, Swedish, German and Croatian. The English language versions are provided as previews.<br>
DOI: 10.17866/rd.salford.7346894.v3
title: Millions Hiding HS Resource Pack

description: Varied resources from the Millions Hiding HS exhibit and display as part of the Community Science Showcase during GameLab. This event was part of Manchester Science Festival 2018, hosted at the University of Salford Library, MediaCityUK campus.<br>
DOI: 10.48544/169385f1-3e23-4f19-9f9b-bddab5d98f53
title: Enhancing capacity to accelerate transitions through entrepreneurial ecosystems: a systemic co-design approach
DOI: 10.57745/bpxvtc
title: FINAL_DB_V1.tab

description: A genetic reference library with COI sequences of french macroinvertebrates with a focus on species found in freshwater ecosystems
DOI: 10.57745/e2e0l9
title: Synthetic_table.tab

description: Number of COI-5P sequences available and alignable with fwhF2/fwhR2N primers per species
DOI: 10.57745/fk56m3
title: Cheklists composition data.tab

description: :unav
DOI: 10.57745/i5ofw2
title: Synthetic_table.csv

description: For each species, number of available and alignable COI-5P sequences with fwhF2/fwhR2N primer pairs
DOI: 10.57745/ktkivl
title: Cheklists composition data.tab

description: :unav
DOI: 10.57745/yhcfcn
title: FINAL_DB_V1.csv

description: :unav
DOI: 10.57745/2ogu0b
title: Synthetic_table_primers.csv

description: For each species, taxonomy and number of available and alignable COI-5P haplotypes with fwhF2/fwhR2N primer pairs
DOI: 10.57745/a9bxcj
title: FINAL_DB_V1_with_ID.csv

description: Final reference library containing only barcodes capable of being aligned by the fwhF2/fwhR2N pair - with BOLD ID
DOI: 10.57745/bkdvge
title: DATABASE_ALL_GENES.txt

description: File containing all the sequences retrieved (whatever the gene) for the queried species of the French metropolitan freshwater macroinvertebrates species list
DOI: 10.57745/c0otur
title: FINAL_DB_V1.tab

description: Final reference library containing only barcodes capable of being aligned by the fwhF2/fwhR2N pair
DOI: 10.57745/ca9kpd
title: DATABASE_COI_GENE.txt

description: File containing COI sequences retrieved for the queried species of the French metropolitan freshwater macroinvertebrates species list
DOI: 10.57745/e2nc6n
title: DATABASE_ALL_GENES_NEW.txt

description: File containing all the sequences retrieved (whatever the gene) for the queried species of the French metropolitan freshwater macroinvertebrates species list
DOI: 10.57745/ecnxtx
title: Synthetic_table_primers.tab

description: For each species, taxonomy and number of available and alignable COI-5P haplotypes with fwhF2/fwhR2N primer pairs
DOI: 10.57745/frs1xj
title: DATABASE_ALL_GENES_TAX.txt

description: File containing all the sequences retrieved (whatever the gene) for the queried species of the French metropolitan freshwater macroinvertebrates species list
DOI: 10.57745/gm5yov
title: Synthetic_table_primers.tab

description: For each species, number of available and alignable COI-5P haplotypes with fwhF2/fwhR2N primer pairs
DOI: 10.57745/iyaa3n
title: Synthetic_table_all_COI_BINS.csv

description: For each species, taxonomy, number of available COI-5P haplotypes and number of unique BINs
DOI: 10.57745/j5sxbx
title: FINAL_DB_V1_with_ID.csv

description: Final reference library containing only barcodes capable of being aligned by the fwhF2/fwhR2N pair - with BOLD ID
DOI: 10.57745/jvfhfu
title: FINAL_DB_V1_with_ID.tab

description: :unav
DOI: 10.57745/kulgzn
title: FINAL_DB_V1.tab

description: Final reference library containing only barcodes (haplotype) capable of being aligned by the fwhF2/fwhR2N pair
DOI: 10.57745/l5r4pn
title: Checklists composition data.tab

description: :unav
DOI: 10.57745/nboz1n
title: DATABASE_COI_GENE.txt

description: File containing COI sequences retrieved for the queried species of the French metropolitan freshwater macroinvertebrates species list
DOI: 10.57745/njcfpo
title: DATABASE_COI_GENE_TAX_BINS.txt

description: File containing COI sequences retrieved for the queried species of the French metropolitan freshwater macroinvertebrates species list
DOI: 10.57745/otcz3k
title: FINAL_DB_V1_with_ID_BINS.csv

description: Final reference library containing only barcodes (haplotype) capable of being aligned by the fwhF2/fwhR2N pair - with BOLD ID and BINS
DOI: 10.57745/r2iks7
title: FINAL_DB_V1_with_ID.tab

description: Final reference library containing only barcodes (haplotype) capable of being aligned by the fwhF2/fwhR2N pair - with BOLD ID
DOI: 10.57745/t3x9xq
title: Synthetic_table.tab

description: For each species, number of available and alignable COI-5P haplotypes with fwhF2/fwhR2N primer pairs
DOI: 10.57745/wf3tvz
title: Synthetic_table_all_COI.csv

description: For each species, number of available COI-5P haplotypes and taxonomy
DOI: 10.57745/yuqgox
title: Synthetic_table.csv

description: For each species, number of available and alignable COI-5P sequences with fwhF2/fwhR2N primer pairs