cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13012/b2idb-3573054_v1
title: NEXUS file for phylogenetic analysis of Eurymelinae (Hemiptera: Cicadellidae)

description: The text file contains the original data used in the phylogenetic analyses of Xue et al. (2020: Systematic Entomology, in press). The text file is marked up according to the standard NEXUS format commonly used by various phylogenetic analysis software packages. The file will be parsed automatically by a variety of programs that recognize NEXUS as a standard bioinformatics file format. The first six lines of the file identify the file as NEXUS, indicate that the file contains data for 89 taxa (species) and 2676 characters, indicate that the first 2590 characters are DNA sequence and the last 86 are morphological, that gaps inserted into the DNA sequence alignment and inapplicable morphological characters are indicated by a dash, and that missing data are indicated by a question mark. The file contains aligned nucleotide sequence data for 5 gene regions and 86 morphological characters. The positions of data partitions are indicated in the mrbayes block of commands for the phylogenetic program MrBayes at the end of the file (Subset1 = 16S gene; Subset2 = 28S gene; Subset3 = COI gene; Subset 4 = Histone H3 and H2A genes). The mrbayes block also contains instructions for MrBayes on various non-default settings for that program. These are explained in the original publication. Descriptions of the morphological characters and more details on the species and specimens included in the dataset are provided in the supplementary document included as a separate pdf, also available from the journal website. The original raw DNA sequence data are available from NCBI GenBank under the accession numbers indicated in the supplementary file.
DOI: 10.25403/upresearchdata.11955756.v2
title: Stocking rate and organic waste type affect development of three Chrysomya species and Lucilia sericata

description: Tables detailing the mass of larvae of four species of Calliphorid flies feeding on waste products (kitchen waste, swine manure and abattoir waste) over time, their survival at the end of feeding and body composition (dry mass, body water content, carbohydrates, lipids and protein). The species are Chrysomya chloropyga, C. megacephala, C. putoria and Lucilia sericata. Data are arranged according to waste type first (separated by batches), then survival, waste reduction and body composition.
DOI: 10.25403/upresearchdata.11955888
title: Allele size of microsatellite markers in S. noctilio and R script for the model predicting sex ratios

description: A table of allele sizes was compiled for 13 microsatellites for 67 males Sirex noctilio from the Western Cape province of South Africa and 77 males from the KwaZulu-Natal province. The dataset also contains (ii) a script for the design of a state-space model predicting the sex-ratio within a population of S. noctilio.
DOI: 10.25403/upresearchdata.11955888.v1
title: Allele size of microsatellite markers in S. noctilio and R script for the model predicting sex ratios

description: A table of allele sizes was compiled for 13 microsatellites for 67 males Sirex noctilio from the Western Cape province of South Africa and 77 males from the KwaZulu-Natal province. The dataset also contains (ii) a script for the design of a state-space model predicting the sex-ratio within a population of S. noctilio.
DOI: 10.25403/upresearchdata.11961249
title: Antioxidant supplementation can reduce the survival costs of amino acid intake in honeybees

description: Over-consuming amino acids is associated with reduced survival in many species, including honeybees. The mechanisms responsible for this are unclear but one possibility is that excessive intake of amino acids increases oxidative damage. If this is the case, antioxidant supplementation may help reduce the survival costs of high amino acid intake. We tested this hypothesis in African honeybees (Apis mellifera scutellata) using the major antioxidant in green tea, epigallocatechin-3-gallate (EGCG). We first determined the dose-range of EGCG that improved survival of caged honeybees fed sucrose solution. We then provided bees with eight diets that differed in their ratio of essential amino acids (EAA) to carbohydrate (C) (0:1, 1:250, 1:100, 1:75, 1:50, 1:25, 1:10, 1:5 EAA:C) and also in their EGCG dose (0.0 or 0.4 mM). We found that bees fed sucrose only solution survived better than bees fed EAA diets. Despite this, bees preferred a diet that contained intermediate ratios of EAA:C (ca. 1:25), which may represent the high demands for nitrogen of developing nurse bees. EGCG supplementation improved honeybee survival but only at an intermediate dose (0.3–0.5 mM) and in bees fed low EAA diets (1:250, 1:100 EAA:C). That EGCG counteracted the lifespan reducing effects of eating low EAA diets suggests that oxidative damage may be involved in the association between EAAs and lifespan in honeybees. However, that EGCG had no effect on survival in bees fed high EAA diets suggests that there are other physiological costs of over-consuming EAAs in honeybees.
DOI: 10.25403/upresearchdata.11961249.v1
title: Antioxidant supplementation can reduce the survival costs of amino acid intake in honeybees

description: Over-consuming amino acids is associated with reduced survival in many species, including honeybees. The mechanisms responsible for this are unclear but one possibility is that excessive intake of amino acids increases oxidative damage. If this is the case, antioxidant supplementation may help reduce the survival costs of high amino acid intake. We tested this hypothesis in African honeybees (Apis mellifera scutellata) using the major antioxidant in green tea, epigallocatechin-3-gallate (EGCG). We first determined the dose-range of EGCG that improved survival of caged honeybees fed sucrose solution. We then provided bees with eight diets that differed in their ratio of essential amino acids (EAA) to carbohydrate (C) (0:1, 1:250, 1:100, 1:75, 1:50, 1:25, 1:10, 1:5 EAA:C) and also in their EGCG dose (0.0 or 0.4 mM). We found that bees fed sucrose only solution survived better than bees fed EAA diets. Despite this, bees preferred a diet that contained intermediate ratios of EAA:C (ca. 1:25), which may represent the high demands for nitrogen of developing nurse bees. EGCG supplementation improved honeybee survival but only at an intermediate dose (0.3–0.5 mM) and in bees fed low EAA diets (1:250, 1:100 EAA:C). That EGCG counteracted the lifespan reducing effects of eating low EAA diets suggests that oxidative damage may be involved in the association between EAAs and lifespan in honeybees. However, that EGCG had no effect on survival in bees fed high EAA diets suggests that there are other physiological costs of over-consuming EAAs in honeybees.
DOI: 10.6084/m9.figshare.12233168.v2
title: We are removing this data.

description: Distribution of Scopus discontinued journals by subject areas. Extended data to the project GhoS(t)copus
DOI: 10.6084/m9.figshare.12233378.v2
title: We are removing this data

description: Distribution of Scopus discontinued journals by country. Extended data to the GhoS(t)copus project.
DOI: 10.6084/m9.figshare.12251357
title: Geographically Weighted Random Forest.zip

description: The code and data are both available.
DOI: 10.6084/m9.figshare.12251357.v1
title: Geographically Weighted Random Forest.zip

description: The code and data are both available.
DOI: 10.6084/m9.figshare.12231170.v3
title: We are removing this data

description: Distribution of Scopus discontinued journals by publisher, extended data to the GhoS(t)copus project
DOI: 10.6084/m9.figshare.12251357.v2
title: Geographically Weighted Random Forest.zip

description: The code and data are both available.
DOI: 10.12751/g-node.16wrxa
title: A three-dimensional, population-based average of the C57BL/6 mouse brain from DAPI-stained coronal slices

description: The full data set and pipeline for constructing the three-dimensional, population-based average of the C57BL/6 mouse brain form DAPI-stained coronal slices. This repository also contains a python implementation of automatic coronal brain slice segmentation. The data set constitutes of all the raw slice images (.tif) in full resolution, the pre-processed version (.nii), the individually reconstructed brain volumes, and the final population-based average.
description: IsDescribedBy: A three-dimensional, population-based average of the C57BL/6 mouse brain from DAPI-stained coronal slices
DOI: 10.25403/upresearchdata.11961318
title: Adult diet of a tephritid fruit fly does not compensate for impact of a poor larval diet on stress resistance

description: Tables detailing the initial condition, desiccation and starvation resistance, dehydration tolerance, and body composition (carbohydrates, glycogen, lipids, and protein) of adult marula fruit flies, Ceratitis cosyra. Data are arranged according to larval diet (low yeast or high yeast), adult diet (none, sugar, or sugar + hydrolysed yeast), and sex (female or male) of each fly, as well as the stress experienced by the fly (desiccation or starvation).
DOI: 10.25403/upresearchdata.11961318.v1
title: Adult diet of a tephritid fruit fly does not compensate for impact of a poor larval diet on stress resistance

description: Tables detailing the initial condition, desiccation and starvation resistance, dehydration tolerance, and body composition (carbohydrates, glycogen, lipids, and protein) of adult marula fruit flies, Ceratitis cosyra. Data are arranged according to larval diet (low yeast or high yeast), adult diet (none, sugar, or sugar + hydrolysed yeast), and sex (female or male) of each fly, as well as the stress experienced by the fly (desiccation or starvation).
DOI: 10.25403/upresearchdata.11961504
title: Clinopyroxene megacrysts from Marion Island, Antarctic Ocean : evidence for a late stage shallow origin

description: Clinopyroxene megacrysts (up to 5 cm) from a scoria cone on Marion Island, Antarctic Ocean are zoned, with compositionally distinct low (Al+Ti) and high (Al+Ti) patches arranged haphazardly throughout crystals. Inclusions of olivine, pyrrhotite, oxides, sulphides, and rounded inclusions with euhedral micro-crystals interpreted as former melt inclusions are observed. Olivine inclusions have variable compositions, ranging from primary Ti-poor crystals to Ti-rich crystals hosting secondary haematite crystals formed by hydrogenation. The crystals contain voids, which are concentrated in the middle of each crystal, indicating that the initial crystal growth was skeletal. Subsequent crystallisation filled in the skeletal framework, creating the patchy zoning in the crystals. The Marion Island megacrysts are not homogenous, but the combination of crustal clinopyroxene compositions, primary and hydrogenated olivine, and the mode of eruption in scoria eruptions indicates that these crystals most likely formed in a shallow magma chamber. Primary olivines crystallised from a mafic magma as well as secondary altered olivines are incorporated into a rapidly growing megacryst in a super-saturated, fluid-rich environment, prior to being ejected onto surface in a scoria eruption.
DOI: 10.25403/upresearchdata.11961504.v1
title: Clinopyroxene megacrysts from Marion Island, Antarctic Ocean : evidence for a late stage shallow origin

description: Clinopyroxene megacrysts (up to 5 cm) from a scoria cone on Marion Island, Antarctic Ocean are zoned, with compositionally distinct low (Al+Ti) and high (Al+Ti) patches arranged haphazardly throughout crystals. Inclusions of olivine, pyrrhotite, oxides, sulphides, and rounded inclusions with euhedral micro-crystals interpreted as former melt inclusions are observed. Olivine inclusions have variable compositions, ranging from primary Ti-poor crystals to Ti-rich crystals hosting secondary haematite crystals formed by hydrogenation. The crystals contain voids, which are concentrated in the middle of each crystal, indicating that the initial crystal growth was skeletal. Subsequent crystallisation filled in the skeletal framework, creating the patchy zoning in the crystals. The Marion Island megacrysts are not homogenous, but the combination of crustal clinopyroxene compositions, primary and hydrogenated olivine, and the mode of eruption in scoria eruptions indicates that these crystals most likely formed in a shallow magma chamber. Primary olivines crystallised from a mafic magma as well as secondary altered olivines are incorporated into a rapidly growing megacryst in a super-saturated, fluid-rich environment, prior to being ejected onto surface in a scoria eruption.
DOI: 10.25573/data.10072625.v1
title: Supporting data for “The challenges of reconstructing tropical biodiversity with sedimentary ancient DNA: a 2200-year-long metagenomic record from Bwindi Impenetrable Forest, Uganda”

description: Supporting datasets and analyses for “The challenges of reconstructing tropical biodiversity with sedimentary ancient DNA: a 2200-year-long metagenomic record from Bwindi Impenetrable Forest, Uganda”. See file "Bwindi_SupportingData.docx" for detailed descriptions of individual file contents. Analyses and datasets are included in the gzip compressed tar archives (*.tar.gz).<br>
DOI: 10.25573/data.10072625.v2
title: Supporting data for “The challenges of reconstructing tropical biodiversity with sedimentary ancient DNA: a 2200-year-long metagenomic record from Bwindi Impenetrable Forest, Uganda”

description: Supporting datasets and analyses for “The challenges of reconstructing tropical biodiversity with sedimentary ancient DNA: a 2200-year-long metagenomic record from Bwindi Impenetrable Forest, Uganda”. See file "Bwindi_SupportingData.docx" for detailed descriptions of individual file contents. Analyses and datasets are included in the gzip compressed tar archives (*.tar.gz).<br>
DOI: 10.5061/dryad.cnp5hqc28
title: Slip rate of the Laohushan fault and the along strike slip rate pattern of the Haiyuan fault zone

description: Uniform slip rates along the main segments of strike slip faults and slip rates decreasing toward fault tips are widely observed along some intensively studied strike slip faults. The Laohushan fault, which is the central segment of the Haiyuan fault. By applying the 3D_Fault_Offsets code, we reevaluated the late Pleistocene slip rate of Laohushan fault. The estimated long-term slip rate of the Laohushan fault ranges from 2.57-5.09 mm/yr over the Miocene. By synthesizing previous slip rates along the Haiyuan fault zone, we found that the Madongshan and Liupanshan could be the main uplifts that absorbed the left-lateral motion along the Haiyuan fault zone as a big restraining bend between the Haiyuan and Qishan-Mazhao fault zones. We then comprehensively synthesized the spatial distribution of slip rates of some well-studied strike slip faults, such as the Kunlun, Altyn Tagh and Alpine faults. It is found that the stability of the slip rate along the main segment is closely related to the fault activity and the block rotation and internal deformation are together responsible. However, the slip rates of strike-slip faults usually change at the restraining bend within the fault zone or towards fault termination.
description: The Haiyuan fault was covered by an airborne LiDAR survey in 2011, which was the first airborne LiDAR survey along active faults in China.
DOI: 10.22021/bbldntz202004
title: The Linked Open British National Bibliography – Books. 1950/2020-04 – N-Triples
DOI: 10.22021/bbldrdfz202004
title: The Linked Open British National Bibliography – Books. 1950/2020-04 – RDF/XML
DOI: 10.22021/bcldntz202004
title: The Linked Open British National Bibliography – Forthcoming Books. 2020-04 – N-Triples
DOI: 10.22021/bcldrdfz202004
title: The Linked Open British National Bibliography – Forthcoming Books. 2020-04 – RDF/XML
DOI: 10.22021/bsldntz202004
title: The Linked Open British National Bibliography – Serials. 1950/2020-04 – N-Triples
DOI: 10.22021/bsldrdfz202004
title: The Linked Open British National Bibliography – Serials. 1950/2020-04 – RDF/XML
DOI: 10.25403/upresearchdata.11967480
title: Ultrasonographic evaluation of fetal development in the rat

description: The study objectives were to measure gestational sac (GS) diameter and crown-to-rump (CR) length in conscious pregnant rats and to determine the chronological ultrasonographic appearance of heart beat and fetal organogenesis. The study formed part of a unilateral surgical salpingectomy trial with 16 female Sprague-Dawley rats (Rattus norvegicus). Ten rats were operated on with six controls before all were mated at 8-10 weeks of age. Gestation length was taken as 22 days. Rats were manually restrained for abdominal ultrasonography and were scanned from day 7 until day 19 or 20 post-mating followed by immediate euthanasia. Measurements’ were taken from two GSs per rat. The presence of several early GSs in a row were described as a “string of pearls”. As a fetus developed features of organogenesis were recorded. There was no significant difference in GS diameters and CR length between the test and control groups. Mean GS diameters ranged from 2.9 mm (day 7) to 18.1 mm (day 20). A string of pearls was seen on days 8-11. The CR length ranged from 1.6 mm (day 11) to 26.4 mm (day 20). A heart beat was first seen on day 11 and the echogenic vertebral column at day 14-15. From day 16, ribs, feet and the isoechoic lungs and liver were seen. The lungs became hyperechoic to the liver from day 18-19. The tail and mandible were visible on day 18 and the aorta and caudal vena cava were seen on day 19, as well as an occasional bladder. These measurements and staged in utero ultrasonographic appearance of various organ and skeletal structures will assist in a reasonably accurate prediction of the day of impending parturition by laboratory personnel and researchers.
DOI: 10.25403/upresearchdata.11967480.v1
title: Ultrasonographic evaluation of fetal development in the rat

description: The study objectives were to measure gestational sac (GS) diameter and crown-to-rump (CR) length in conscious pregnant rats and to determine the chronological ultrasonographic appearance of heart beat and fetal organogenesis. The study formed part of a unilateral surgical salpingectomy trial with 16 female Sprague-Dawley rats (Rattus norvegicus). Ten rats were operated on with six controls before all were mated at 8-10 weeks of age. Gestation length was taken as 22 days. Rats were manually restrained for abdominal ultrasonography and were scanned from day 7 until day 19 or 20 post-mating followed by immediate euthanasia. Measurements’ were taken from two GSs per rat. The presence of several early GSs in a row were described as a “string of pearls”. As a fetus developed features of organogenesis were recorded. There was no significant difference in GS diameters and CR length between the test and control groups. Mean GS diameters ranged from 2.9 mm (day 7) to 18.1 mm (day 20). A string of pearls was seen on days 8-11. The CR length ranged from 1.6 mm (day 11) to 26.4 mm (day 20). A heart beat was first seen on day 11 and the echogenic vertebral column at day 14-15. From day 16, ribs, feet and the isoechoic lungs and liver were seen. The lungs became hyperechoic to the liver from day 18-19. The tail and mandible were visible on day 18 and the aorta and caudal vena cava were seen on day 19, as well as an occasional bladder. These measurements and staged in utero ultrasonographic appearance of various organ and skeletal structures will assist in a reasonably accurate prediction of the day of impending parturition by laboratory personnel and researchers.
DOI: 10.25403/upresearchdata.12302066
title: Modified atmosphere packaging and irradiation preservation of a sorghum porridge and spinach relish meal

description: The datasets were collated from two experiments (Phase 1 and 2) that made up the project. The objective of Phase 1 was to determine the effect of two different modified atmosphere packaging gas mixtures (MAP 1: 84.5% N<sub>2</sub> + 15.5 % CO<sub>2</sub>; MAP 2: 82.3% N<sub>2</sub> + 15.9% CO<sub>2</sub> + 1.8% O<sub>2</sub>) in combination with irradiation at five different dose levels (2, 4, 6, 8 and 10 kGy) on the inactivation of aerobic mesophilic bacteria (TPC) and <i>C. sporogenes</i> inoculated into the RTE meal, in comparison to a control (0 kGy). The purpose of this phase was to optimise the processing parameters for Phase 2. The objective of Phase 2 was to determine the effects of the optimal combination treatment as determined in Phase 1 on the safety and shelf-life of the sorghum porridge and spinach (morÔgo) RTE meal, as measured by <i>C</i>. <i>sporogenes</i> counts and TPC respectively. In Phase 2, a combination of MAP 1 (84.5% N<sub>2</sub> + 15.5% CO<sub>2</sub>) and irradiation at 10 kGy was used in the processing of inoculated RTE meal samples. The irradiation dose of 10 kGy was chosen for use in this phase because the two components of the RTE meal appeared to remain acceptable up to this dose level from a sensory point of view and this irradiation dose reduced inoculated <i>C</i>. <i>sporogenes</i> spores by approximately 4 log<sub>10</sub> cycles. MAP 1 (84.5% N<sub>2</sub> + 15.5% CO<sub>2</sub>) was chosen for use in Phase 2 of the research project, as it was postulated that it would minimise the effects of oxidative rancidity in the RTE meal during storage. <br>
DOI: 10.25403/upresearchdata.12302066.v1
title: Modified atmosphere packaging and irradiation preservation of a sorghum porridge and spinach relish meal

description: The datasets were collated from two experiments (Phase 1 and 2) that made up the project. The objective of Phase 1 was to determine the effect of two different modified atmosphere packaging gas mixtures (MAP 1: 84.5% N<sub>2</sub> + 15.5 % CO<sub>2</sub>; MAP 2: 82.3% N<sub>2</sub> + 15.9% CO<sub>2</sub> + 1.8% O<sub>2</sub>) in combination with irradiation at five different dose levels (2, 4, 6, 8 and 10 kGy) on the inactivation of aerobic mesophilic bacteria (TPC) and <i>C. sporogenes</i> inoculated into the RTE meal, in comparison to a control (0 kGy). The purpose of this phase was to optimise the processing parameters for Phase 2. The objective of Phase 2 was to determine the effects of the optimal combination treatment as determined in Phase 1 on the safety and shelf-life of the sorghum porridge and spinach (morÔgo) RTE meal, as measured by <i>C</i>. <i>sporogenes</i> counts and TPC respectively. In Phase 2, a combination of MAP 1 (84.5% N<sub>2</sub> + 15.5% CO<sub>2</sub>) and irradiation at 10 kGy was used in the processing of inoculated RTE meal samples. The irradiation dose of 10 kGy was chosen for use in this phase because the two components of the RTE meal appeared to remain acceptable up to this dose level from a sensory point of view and this irradiation dose reduced inoculated <i>C</i>. <i>sporogenes</i> spores by approximately 4 log<sub>10</sub> cycles. MAP 1 (84.5% N<sub>2</sub> + 15.5% CO<sub>2</sub>) was chosen for use in Phase 2 of the research project, as it was postulated that it would minimise the effects of oxidative rancidity in the RTE meal during storage. <br>
DOI: 10.13012/b2idb-5961181_v1
title: KEEI Kauffman Entrepreneurship Education Inventory Four Year Colleges 2015

description: This dataset is a snapshot of the presence and structure of entrepreneurship education in U.S. four-year colleges and universities in 2015, including co-curricular activities and related infrastructure. Public, private not-for-profit and for-profit institutions are included, as are specialized four-year institutions. The dataset provides insight into the presence of entrepreneurship education both within business units and in other units of college campuses. Entrepreneurship is defined broadly, to include small business management and related career-focused options.