cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.16501018
title: Genomes of cactophilic Drosophila species and their respective gene and TE annotations + QC data

description: The genomes deposited in this repository refers to the data used in the study entitled "Transposable elements contribute to the evolution of host shift-related genes in cactophilic Drosophila species", from Oliveira D. S., Larue A., Nunes W. V. B., Sabot F., Bodelón A., García Guerreiro M. P., Vieira C., Carareto C. M. A.

Each genome has its following assembly (fasta), gene annotation (gff), and TE annotation (gtf). The quality control for the nanopore genomes can be accessed on QC_nanopore_genomes.zip, and the quality control for the RNA-seq data on QC_RNAseq.zip.

Additional files, as code and input files to reproduce the specific analysis of the manuscript, are also provided in the github repository: https://github.com/OliveiraDS-hub/Pipelines-Cactophilic-Drosophila-Species
DOI: 10.15468/dl.tc64hu
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ipomoea purpurea",
 "Country is Chile",
 "HasCoordinate is true"
 ]
}

 The dataset includes 30 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056937-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.b4pqc3
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ipomoea purpurea",
 "Country is Comoros",
 "HasCoordinate is true"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056938-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.txsj6b
title: Occurrence Download

description: A dataset containing 59 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Coleostephus myconis",
 "Country is Brazil",
 "HasCoordinate is true"
 ]
}

 The dataset includes 59 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056939-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.appwqx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cassia occidentalis",
 "Country is Pakistan",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056940-250717081556266/datasets/export for details.
DOI: 10.15468/dl.7behfa
title: Occurrence Download

description: A dataset containing 131454 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Icterus parisorum)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 131454 records from 75 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056913-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5vcu66
title: Occurrence Download

description: A dataset containing 944 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Juncus tenuis",
 "Country is Romania",
 "HasCoordinate is true"
 ]
}

 The dataset includes 944 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056941-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fbcamb
title: Occurrence Download

description: A dataset containing 354 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Melolobium candicans",
 "HasCoordinate is true",
 "Geometry POLYGON ((-17.66889 -35.11691, 51.34702 -35.11691, 51.34702 37.62, -17.66889 37.62, -17.66889 -35.11691))"
 ]
}

 The dataset includes 354 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056942-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n5bhru
title: Occurrence Download

description: A dataset containing 426279 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Silene vulgaris"
 ]
}

 The dataset includes 426279 records from 2191 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056850-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j59jmb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Solenogastres)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1980",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Geometry POLYGON((0 0,30 0,30 30,0 30,0 0))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011950-251009101135966/datasets/export for details.
DOI: 10.15468/dl.3n8u6t
title: Occurrence Download

description: A dataset containing 525 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Perdix dauurica",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 525 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011951-251009101135966/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tbtgkr
title: Occurrence Download

description: A dataset containing 288 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Arjona tuberosa"
 ]
}

 The dataset includes 288 records from 47 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006203-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tjvgzy
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AAU2005"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006204-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.52zthk
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cyperus esculentus",
 "Country is Bolivia (Plurinational State of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 10 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006206-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7jgwg6
title: Occurrence Download

description: A dataset containing 640 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Duabanga grandiflora"
 ]
}

 The dataset includes 640 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006205-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2hycma
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Canachites canadensis)",
 "Country is one of (Afghanistan, Armenia, Azerbaijan, Bahrain, Bangladesh, Bhutan, Brunei Darussalam, Cambodia, China, Cyprus, Georgia, Hong Kong, India, Indonesia, Iran (Islamic Republic of), Iraq, Israel, Japan, Jordan, Kazakhstan, Korea (Democratic People’s Republic of), Korea, Republic of, Kuwait, Kyrgyzstan, Lao People’s Democratic Republic, Lebanon, Macao, Malaysia, Maldives, Mongolia, Myanmar, Nepal, Oman, Pakistan, Palestine, State of, Philippines, Qatar, Saudi Arabia, Singapore, Sri Lanka, Syrian Arab Republic, Tajikistan, Thailand, Timor-Leste, Türkiye, Turkmenistan, United Arab Emirates, Uzbekistan, Viet Nam, Yemen)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006209-250711103210423/datasets/export for details.
DOI: 10.18112/openneuro.ds006465.v1.0.0
title: 3M-CPSEED：An EEG-based Dataset for Chinese Pinyin Production in Overt, Silent-intended, and Imagined Speech
DOI: 10.15468/dl.yzgnpn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Canachites canadensis)",
 "Country is one of (Anguilla, Antigua and Barbuda, Argentina, Aruba, Bahamas, Barbados, Belize, Bolivia (Plurinational State of), Bonaire, Sint Eustatius and Saba, Bouvet Island, Brazil, Cayman Islands, Chile, Colombia, Costa Rica, Cuba, Curaçao, Dominica, Dominican Republic, Ecuador, El Salvador, Falkland Islands (Malvinas), French Guiana, Grenada, Guadeloupe, Guatemala, Guyana, Haiti, Honduras, Jamaica, Martinique, Mexico, Montserrat, Nicaragua, Panama, Paraguay, Peru, Puerto Rico, Saint Barthélemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Sint Maarten (Dutch part), South Georgia and the South Sandwich Islands, Suriname, Trinidad and Tobago, Turks and Caicos Islands, Uruguay, Venezuela (Bolivarian Republic of), Virgin Islands (British), Virgin Islands (U.S.))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006210-250711103210423/datasets/export for details.
DOI: 10.15468/dl.7txjxa
title: Occurrence Download

description: A dataset containing 220621 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Aves",
 "HasCoordinate is true",
 "Year is greater than or equal to 1979",
 "Year is less than or equal to 2013",
 "Geometry POLYGON ((96.39695 53.79294, 97.08239 36.1586, 136.1961 37.67892, 135.5107 55.31326, 96.39695 53.79294))"
 ]
}

 The dataset includes 220621 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006179-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10224309
title: Sediment and bottom water eDNA metabarcoding to support coastal management

description: Labels, geographical coordinates, and MOTU table from Sediment and Bottom Waters eDNA COI Metabarcoding samples and dataset description
DOI: 10.15468/dl.5vpbk6
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Puntius lepidus"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006212-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hjzagy
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Avena fatua",
 "Country is Bolivia (Plurinational State of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006215-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vdvqyk
title: Occurrence Download

description: A dataset containing 371 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cerastium mollissimum"
 ]
}

 The dataset includes 371 records from 48 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006216-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zd55v9
title: Occurrence Download

description: A dataset containing 782 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Armeria caespitosa"
 ]
}

 The dataset includes 782 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006211-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.njnhrh
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dubyaea bhotanica"
 ]
}

 The dataset includes 62 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006213-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3jawjc
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Canachites canadensis)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006214-250711103210423/datasets/export for details.
DOI: 10.15468/dl.9hfyu4
title: Occurrence Download

description: A dataset containing 321 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dermogenys collettei"
 ]
}

 The dataset includes 321 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006219-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p7f8vb
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Canachites canadensis)",
 "Country is one of (Algeria, Angola, Benin, Botswana, British Indian Ocean Territory, Burkina Faso, Burundi, Cabo Verde, Cameroon, Central African Republic, Chad, Comoros, Congo, Congo, Democratic Republic of the, Côte d’Ivoire, Djibouti, Egypt, Equatorial Guinea, Eritrea, Eswatini, Ethiopia, French Southern Territories, Gabon, Gambia, Ghana, Guinea, Guinea-Bissau, Kenya, Lesotho, Liberia, Libya, Madagascar, Malawi, Mali, Mauritania, Mauritius, Mayotte, Morocco, Mozambique, Namibia, Niger, Nigeria, Réunion, Rwanda, Saint Helena, Ascension and Tristan da Cunha, Sao Tome and Principe, Senegal, Seychelles, Sierra Leone, Somalia, South Africa, South Sudan, Sudan, Tanzania, United Republic of, Togo, Tunisia, Uganda, Western Sahara, Zambia, Zimbabwe)"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006218-250711103210423/datasets/export for details.
DOI: 10.15468/dl.knq7g2
title: Occurrence Download

description: A dataset containing 62 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boechera languida"
 ]
}

 The dataset includes 62 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006217-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fbaz58
title: Occurrence Download

description: A dataset containing 543 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dufourea alpina"
 ]
}

 The dataset includes 543 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006221-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.amjr8u
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cerastium montioides"
 ]
}

 The dataset includes 6 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006222-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wgg9au
title: Occurrence Download

description: A dataset containing 8 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brachiaria brizantha",
 "Country is Bolivia (Plurinational State of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 8 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006223-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.8077926
title: Sediment and bottom water eDNA metabarcoding to support coastal management

description: Labels, geographical coordinates, and MOTU table from Sediment and Bottom Waters eDNA COI Metabarcoding samples and dataset description
DOI: 10.5281/zenodo.8077927
title: Sediment and bottom water eDNA metabarcoding to support coastal management

description: Labels, geographical coordinates, and MOTU table from Sediment and Bottom Waters eDNA COI Metabarcoding samples
DOI: 10.15468/dl.qhmfrz
title: Occurrence Download

description: A dataset containing 161 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:ACH7722"
 ]
}

 The dataset includes 161 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006224-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zby642
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dufourea graeca"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006226-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nakpec
title: Occurrence Download

description: A dataset containing 4474 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cerastium nutans"
 ]
}

 The dataset includes 4474 records from 270 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006225-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n547ep
title: Occurrence Download

description: A dataset containing 13441 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Juncus bulbosus",
 "Geometry POLYGON((-8.00174339329464 54.1998526673513, 0.202120938926891 54.1998526673513, 0.202120938926891 61.2628565887411, -8.00174339329464 61.2628565887411, -8.00174339329464 54.1998526673513))",
 "CoordinateUncertaintyInMeters is 0,101",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 13441 records from 44 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006227-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xg3j7w
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Brachiaria eminii",
 "Country is Bolivia (Plurinational State of)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006228-250711103210423/datasets/export for details.
DOI: 10.15468/dl.3kgx8r
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Desmopuntius rhomboocellatus"
 ]
}

 The dataset includes 57 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006229-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.htmweq
title: Occurrence Download

description: A dataset containing 287 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Dufourea paradoxa"
 ]
}

 The dataset includes 287 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006230-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mx8ep7
title: Occurrence Download

description: A dataset containing 107 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Boechera lasiocarpa"
 ]
}

 The dataset includes 107 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006231-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.