cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25504/fairsharing.en9npn
title: FAIRsharing record for: The Barcode of Life Data Systems
title: BOLD

description: This FAIRsharing record describes:  The Barcode of Life Data Systems (BOLD) is an online workbench that aids collection, management, analysis, and use of DNA barcodes. It consists of 3 components (MAS, IDS, and ECS) that each address the needs of various groups in the barcoding community.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.gf8yhy
title: FAIRsharing record for: Non-Ribosomal Peptides Database
title: NORINE

description: This FAIRsharing record describes:  Norine is a platform that includes a database of nonribosomal peptides together with tools for their analysis.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.hm0s3e
title: FAIRsharing record for: Therapeutically Relevant Multiple Pathways Database
title: TRMP

description: This FAIRsharing record describes:  The Therapeutically Relevant Multiple Pathways Database is designed to provide information about such multiple pathways and related therapeutic targets described in the literatures, the targeted disease conditions, and the corresponding drugs/ligands directed at each of these targets. This resource has been marked as Uncertain because its project home can no longer be found either with a general search or on the founding group's website at http://bidd.group/group/about.htm. Please get in touch if you have any information about this resource.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.2c45na
title: FAIRsharing record for: PRODORIC
title: null

description: This FAIRsharing record describes:  PRODORIC is a comprehensive database about gene regulation and gene expression in prokaryotes. It includes a manually curated and unique collection of transcription factor binding sites.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.pep8cs
title: FAIRsharing record for: Ciona intestinalis Protein Database
title: CIPRO

description: This FAIRsharing record describes:  CIPRO is an integrated protein that has been developed to provide widespread information of the proteins expressed in the ascidian Ciona intestinalis, especially for the researcher who wants to get advance and useful information for starting biological and biomedical research. The protein information in CIPRO directly links to gene expression, a tool for peptide mass fingerprinting (PMF), intracellular localization, 3D image of early development, and transgenic resources.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.8ye60e
title: FAIRsharing record for: Agile Protein Interactomes Dataserver
title: APID Interactomes

description: This FAIRsharing record describes:  APID Interactomes (Agile Protein Interactomes DataServer) provides information on the protein interactomes of numerous organisms, based on the integration of known experimentally validated protein-protein physical interactions (PPIs). The interactome data includes a report on quality levels and coverage over the proteomes for each organism included. APID integrates PPIs from primary databases of molecular interactions (BIND, BioGRID, DIP, HPRD, IntAct, MINT) and also from experimentally resolved 3D structures (PDB) where more than two distinct proteins have been identified. This collection references protein interactors, through a UniProt identifier.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.9k5mbg
title: FAIRsharing record for: National Microbial Pathogen Data Resource
title: NMPDR

description: This FAIRsharing record describes:  The NMPDR provided curated annotations in an environment for comparative analysis of genomes and biological subsystems, with an emphasis on the food-borne pathogens Campylobacter, Listeria, Staphylococcus, Streptococcus, and Vibrio; as well as the STD pathogens Chlamydiaceae, Haemophilus, Mycoplasma, Neisseria, Treponema, and Ureaplasma.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.n2xy00
title: FAIRsharing record for: siRecords
title: siRecords

description: This FAIRsharing record describes:  siRecords is a collection of a diverse range of mammalian RNAi experiments . After choosing a gene, researchers can find all siRNA records targeting the gene, design a new siRNA targeting it, or submit siRNAs that have been tested. The resource also helps experimental RNAi researchers by providing them with the efficacy and other information about the siRNAs experiments designed and conducted previously against the genes of their interest. This resource has been marked as Uncertain because its project home can no longer be found. Please get in touch if you have any information about this resource.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.zjcys8
title: FAIRsharing record for: Structure, Interfaces and Alignments for Protein-Protein Interactions Database
title: SNAPPI-DB

description: This FAIRsharing record describes:  SNAPPI-DB is an object-oriented database of domain-domain interactions observed in structural data. The structural data is obtained from the MSD data warehouse as the MSD provides consistent data with links to many types of data about proteins and nucleic acids.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.4zw0d9
title: FAIRsharing record for: Cnidarian Evolutionary Genomics Database
title: CnidBase

description: This FAIRsharing record describes:  CnidBase, the Cnidarian Evolutionary Genomics Database, is a tool for investigating the evolutionary, developmental and ecological factors that affect gene expression and gene function in cnidarians.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.k6vsdr
title: FAIRsharing record for: Database of MHC Ligands and Peptide Motifs
title: SYFPEITHI

description: This FAIRsharing record describes:  SYFPEITHI is a database comprising more than 7000 peptide sequences known to bind class I and class II MHC molecules.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.mcrd3t
title: FAIRsharing record for: Human-Transcriptome Database for Alternative Splicing
title: H-DBAS

description: This FAIRsharing record describes:  H-DBAS offers unique data and viewer for human Alternative Splicing (AS) analysis including genome-wide representative alternative splicing variants (RASVs), RASVs affecting protein functions, conserved RASVs compared with mouse genome (full length cDNAs).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.72qwj0
title: FAIRsharing record for: StellaBase
title: StellaBase

description: This FAIRsharing record describes:  StellaBase is the Nematostella vectensis genomics database.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.9fz3g3
title: FAIRsharing record for: Tandem Repeats Database
title: TRDB

description: This FAIRsharing record describes:  Tandem Repeats Database (TRDB) is a public repository of information on tandem repeats in genomic DNA and contains a variety of tools for their analysis.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.bgm0mm
title: FAIRsharing record for: Database of Liver Expression Profile
title: dbLEP

description: This FAIRsharing record describes:  With the rapid progress of the HLPP (Human Liver Proteome Project), a massive quantity of liver proteome expression profile data has been generated. To manage the valuable resource effectively and present it for researchers, a web-based database of liver proteome expression profile named dbLEP has been developed. Currently dbLEP holds two datasets of human fetal liver and HLPP French liver with approximately 17247 proteins and 36990 peptides. Other datasets, such as HLPP Chinese liver and subcellula, C57 mouse liver subcellula will be online soon. Both non-redundant proteins and all possible proteins are presented so that users could understand each dataset comprehensively. Besides the complete identification, dbLEP provides related information like mass spectrums for users to verify the confidence.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ssx7a2
title: FAIRsharing record for: Comparative Fungal Genomics Platform
title: CFGP

description: This FAIRsharing record describes:  The Comparative Fungal Genomics Platform (CFGP) is a database that provides fungal genomic data and a number of tools to support research in this area. Please note that, while this resource remains available, it has not been updated since 2017.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.fj1d4d
title: FAIRsharing record for: Magnaporthe grisea Database
title: MGG

description: This FAIRsharing record describes:  The Magnaporthe comparative genomics database provides accesses to multiple fungal genomes from the Magnaporthaceae family to facilitate the comparative analysis. The project is a partnership between the International Rice Blast Genome Consortium, and the Broad Institute. The project is facilitated by an Advisory Board made up of members of the rice blast research community.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.8dak0r
title: FAIRsharing record for: Open Regulatory Annotation
title: ORegAnno

description: This FAIRsharing record describes:  The Open REGulatory ANNOtation database (ORegAnno) is an open database for the curation of known regulatory elements from scientific literature. Annotation is collected from users worldwide for various biological assays and is automatically cross-referenced against PubMED, Entrez Gene, EnsEMBL, dbSNP, the eVOC: Cell type ontology, and the Taxonomy database.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.er98b1
title: FAIRsharing record for: CutDB
title: CutDB

description: This FAIRsharing record describes:  CutDB is one of the first systematic efforts to build an easily accessible collection of documented proteolytic events for natural proteins in vivo or in vitro. A CutDB entry is defined by a unique combination of these three attributes: protease, protein substrate, and cleavage site. Currently, CutDB integrates 3,070 proteolytic events for 470 different proteases captured from public archives (such as MEROPS and HPRD) and publications.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.etp533
title: FAIRsharing record for: BRENDA Enzyme Database
title: BRENDA

description: This FAIRsharing record describes:  BRENDA is a collection of enzyme functional data available to the scientific community. The enzymes are classified according to the Enzyme Commission list of enzymes. Enzymes from 6674 different EC numbers are covered. Frequently enzymes with very different properties are included under the same EC number. Although we intend to give a representative overview on the characteristics and variability of each enzyme the Handbook is not a compendium. The reader will have to go to the primary literature for more detailed information.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.pxm2h8
title: FAIRsharing record for: MutDB
title: MutDB

description: This FAIRsharing record describes:  The goal of MutDB is to annotate human variation data with protein structural information and other functionally relevant information, if available. The mutations are organized by gene. Click on the alphabet below to go alphabetically through the list of genes. This resource has been marked as Uncertain because its project home can no longer be found. Please get in touch if you have any information about this resource.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.8zf3ny
title: FAIRsharing record for: Universal PBM Resource for Oligonucleotide Binding Evaluation
title: UniPROBE

description: This FAIRsharing record describes:  The UniPROBE (Universal PBM Resource for Oligonucleotide Binding Evaluation) database hosts data generated by universal protein binding microarray (PBM) technology on the in vitro DNA binding specificities of proteins.
We have retained the status of this resource as 'Ready', however please note the following message from the UniPROBE developers: We are aware that certain functionalities, such as various web tools, on the UniPROBE webpages are currently not working. You should nevertheless be able to download the PBM data; please contact us if you are unable to download any of the data and we will help you to get access to the data. UniPROBE is currently an unfunded, publicly available resource. Please let us know if you are interested in volunteering to further develop UniPROBE in a dedicated capacity, such as a self-funded Masters or PhD thesis project.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.d7jrv2
title: FAIRsharing record for: Catalog of Fishes Genus Database
title: CASGEN

description: This FAIRsharing record describes:  The Catalog of Fishes is the authoritative reference for taxonomic fish names, featuring a searchable on-line database.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.29qx34
title: FAIRsharing record for: BloodExpress
title: BloodExpress

description: This FAIRsharing record describes:  BloodExpress is a database of gene expression in mouse haematopoiesis has 271 individual microarray experiments derived from 15 distinct studies done on most characterised mouse blood cell types. Gene expression information has been discretised to absent/present/unknown calls.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.3hrbfr
title: FAIRsharing record for: Automatic molecular interaction predictions
title: InteroPorc

description: This FAIRsharing record describes:  InteroPorc is an automatic prediction tool to infer protein-protein interaction networks. It is applicable for lots of species using orthology and known interactions. The interoPORC method is based on the interolog concept and combines source interaction datasets from public databases as well as clusters of orthologous proteins (PORC) available on Integr8.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.krvr4
title: FAIRsharing record for: Erythropoiesis Database
title: EpoDB

description: This FAIRsharing record describes:  EpoDB (Erythropoiesis database) is a database of genes that relate to vertebrate red blood cells. It includes DNA sequence, structural features, protein information, gene expression information and transcription factor binding sites.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.n8pxvx
title: FAIRsharing record for: Cell Signaling Technology Pathway Database
title: CST

description: This FAIRsharing record describes:  A small pathway portal for showcasing Cell Signaling Technology phospho-antibody products. Contains pathway diagrams that are clickable and link to more information about each protein and the commercial products that are available for that protein.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.vs7865
title: FAIRsharing record for: The Cambridge Structural Database
title: CSD

description: This FAIRsharing record describes:  Established in 1965, the Cambridge Structural Database (CSD) is the a repository for small-molecule organic and metal-organic crystal 3D structures. Database records are automatically checked and manually curated by one of our expert in-house scientific editors. Every structure is enriched with chemical representations, as well as bibliographic, chemical and physical property information, adding further value to the raw structural data.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.ac329k
title: FAIRsharing record for: The Autism Chromosome Rearrangement Database
title: null

description: This FAIRsharing record describes:  The Autism Chromosome Rearrangement Database is a collection of hand curated breakpoints and other genomic features, related to autism, taken from publicly available literature, databases and unpublished data.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.