cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.3113662
title: A vaginal drug delivery model

description: Efficient drug delivery at vaginal cavity is often a challenge owing to its peculiar physiological variations including vast differences in pH. Keeping in view this attribute of the target site, the current work was aimed at developing formulation strategies which could overcome this and successfully deliver molecules like itraconazole through SLNs. Optimized SLNs with the given composition was selected for further development into mucoadhesive and thermosensitive gel. Stearic acid and Compritol 888 (1:1, w/w ratio) as lipid, a mixture of 3% Poloxomer 188 and 0.5% sodium taurocholate as surfactant and organic to aqueous ratio of 10:50 was taken. Carbopol 934 and Pluronic F 127 were taken for the development of gel. Optimized gel exhibited a desired gelling temperature (35 °C); viscosity (0.920 PaS) and appreciable <i>in vitro</i> drug release (62.2% in 20 h). MTT assay did not show any cytotoxic effect of the gel. When evaluated <i>in vivo,</i> it did not exhibit any irritation potential despite appreciable bioadhesion. A remarkable decrease in CFUs was also observed in comparison with control and marketed formulation when evaluated in rat infection model. Thus, the proposed study defines the challenges for developing a suitable formulation system overcoming the delivery barriers of the vaginal site.
DOI: 10.6084/m9.figshare.3113644
title: Thickness of pyroclastic cover beds: the case study of Mount Albino (Campania region, southern Italy)

description: The paper presents a method for estimating and mapping – at detailed scale (1:5000) – the thickness of pyroclastic cover beds resting on calcareous bedrock. This method, tested in the study area of Mount Albino (Campania region, southern Italy), makes use mainly of information gathered from <i>in situ</i> investigations, managed and processed in a geographical information system environment via a geostatistical interpolation technique (i.e. ordinary kriging) and finally integrated and amended by adopting a heuristic approach. Given its easy applicability and affordable costs, the proposed method can be used in similar geological contexts where knowledge of the spatial distribution of pyroclastic cover beds is a requirement for understanding and predicting slope instability processes.
DOI: 10.6084/m9.figshare.3113662.v1
title: A vaginal drug delivery model

description: Efficient drug delivery at vaginal cavity is often a challenge owing to its peculiar physiological variations including vast differences in pH. Keeping in view this attribute of the target site, the current work was aimed at developing formulation strategies which could overcome this and successfully deliver molecules like itraconazole through SLNs. Optimized SLNs with the given composition was selected for further development into mucoadhesive and thermosensitive gel. Stearic acid and Compritol 888 (1:1, w/w ratio) as lipid, a mixture of 3% Poloxomer 188 and 0.5% sodium taurocholate as surfactant and organic to aqueous ratio of 10:50 was taken. Carbopol 934 and Pluronic F 127 were taken for the development of gel. Optimized gel exhibited a desired gelling temperature (35 °C); viscosity (0.920 PaS) and appreciable <i>in vitro</i> drug release (62.2% in 20 h). MTT assay did not show any cytotoxic effect of the gel. When evaluated <i>in vivo,</i> it did not exhibit any irritation potential despite appreciable bioadhesion. A remarkable decrease in CFUs was also observed in comparison with control and marketed formulation when evaluated in rat infection model. Thus, the proposed study defines the challenges for developing a suitable formulation system overcoming the delivery barriers of the vaginal site.
DOI: 10.6084/m9.figshare.3113551
title: Murk and DeWan. Exhaustive genome-wide search for SNP-SNP interactions across ten human diseases. Supplemental File S-1.

description: Cited as File S-1 in the following publication:<br>Murk W, DeWan AT. Exhaustive Genome-Wide Search for SNP-SNP Interactions Across Ten Human Diseases. G3 (Bethesda). 2016 May 16. pii: g3.116.028563. doi: 10.1534/g3.116.028563. PMID: 27185397
DOI: 10.6084/m9.figshare.3113542
title: QSAR protocol

description: QSAR protocol based on this review. Trust, but verify: on the importance of chemical structure curation in cheminformatics and QSAR modeling research.J Chem Inf Model. 2010 Jul 26;50(7):1189-204. doi: 10.1021/ci100176x. PMID: 20572635. Fourches D, Muratov E, Tropsha A.
DOI: 10.6084/m9.figshare.3113551.v1
title: Murk and DeWan. Exhaustive genome-wide search for SNP-SNP interactions across ten human diseases. Supplemental File S-1.

description: Cited as File S-1 in the following publication:<br>Murk W, DeWan AT. Exhaustive Genome-Wide Search for SNP-SNP Interactions Across Ten Human Diseases. G3 (Bethesda). 2016 May 16. pii: g3.116.028563. doi: 10.1534/g3.116.028563. PMID: 27185397
DOI: 10.6084/m9.figshare.3113644.v2
title: Thickness of pyroclastic cover beds: the case study of Mount Albino (Campania region, southern Italy)

description: The paper presents a method for estimating and mapping – at detailed scale (1:5000) – the thickness of pyroclastic cover beds resting on calcareous bedrock. This method, tested in the study area of Mount Albino (Campania region, southern Italy), makes use mainly of information gathered from <i>in situ</i> investigations, managed and processed in a geographical information system environment via a geostatistical interpolation technique (i.e. ordinary kriging) and finally integrated and amended by adopting a heuristic approach. Given its easy applicability and affordable costs, the proposed method can be used in similar geological contexts where knowledge of the spatial distribution of pyroclastic cover beds is a requirement for understanding and predicting slope instability processes.
DOI: 10.6084/m9.figshare.3113524
title: Snf1/AMP-Activated Protein Kinase Regulates Metabolic Changes during Environmental Stress Responses

description: Here, we report that Snf1 regulates metabolic changes in response to environmental stresses in <i>Saccharomyces cerevisiae</i>.
DOI: 10.6084/m9.figshare.3113644.v1
title: Thickness of pyroclastic cover beds: the case study of Mount Albino (Campania region, southern Italy)

description: The paper presents a method for estimating and mapping – at detailed scale (1:5000) – the thickness of pyroclastic cover beds resting on calcareous bedrock. This method, tested in the study area of Mount Albino (Campania region, southern Italy), makes use mainly of information gathered from <i>in situ</i> investigations, managed and processed in a geographical information system environment via a geostatistical interpolation technique (i.e. ordinary kriging) and finally integrated and amended by adopting a heuristic approach. Given its easy applicability and affordable costs, the proposed method can be used in similar geological contexts where knowledge of the spatial distribution of pyroclastic cover beds is a requirement for understanding and predicting slope instability processes.
DOI: 10.6084/m9.figshare.3113524.v1
title: Snf1/AMP-Activated Protein Kinase Regulates Metabolic Changes during Environmental Stress Responses

description: Here, we report that Snf1 regulates metabolic changes in response to environmental stresses in <i>Saccharomyces cerevisiae</i>.
DOI: 10.6084/m9.figshare.3113515
title: Air quality monitoring stations data - Marrakech - Morocco

description: This files contain (part) of air quality monitoring data sets gathered from three different location in Marrakech - Morocco during 2009 and 2010 (used in our reserach works).<br>Each record contains 11 attribute: The five pollutants concentration (SO2, O3, NO2, PM10 and CO), solar radiation, Wind speed, Temperature (Celsius) (Except Dawdiat station), Humidity ratio, Date and Time.<br><br><b>-Monitoring station details</b><br><br><i>Station 1: Jamaa EL Fna (JEF)</i><br>Marrakech-Morocco<br>Latitude (N): 31.620254<br>Longitude (W): 7.988897<br>Start date : 01/06/2009<br>***************************************<br>***************************************<br><i>Station 2: Mhamid</i><br>Marrakech-Morocco<br>Latitude (N): 31.596289<br>Longitude (W): 8.043691<br>Start date :01/06/2009<br>***************************************<br>***************************************<br><i>Station 3: Dawdiat</i><br>Marrakech-Morocco<br>Latitude (N): 31.653676<br>Longitude (W): 7.995688<br>Start date : 01/03/2010<br>***************************************<br><br><b>-Record's attribute description</b><br><br>Time = Hours<br>CO = CO Concentration (mg/m3 )<br>NO2 = CO Concentration (µg/m3 )<br>O3 = Concentration (µg/m3 )<br>PM10 = Concentration (µg/m3 )<br>SO2 = Concentration (µg/m3 )<br>HR =Humidity ratio(%)<br>TC = Temperature (Celsius)<br>WS = Wind Speed (m/s)<br>SR = Solar Radiation (W/m2)<br>
DOI: 10.6084/m9.figshare.3113518
title: data_deposit.txt

description: We measured external morphological traits on 92 stream fishes of the Ozark Highlands ecoregion, Oklahoma following methods described by Gatz (1979) and Winemiller (1991). Fish specimens were acquired either via field sampling or from the Oklahoma State University Collection of Vertebrates. All specimens were preserved in 70% ethanol. We measured the traits using digital calipers.
DOI: 10.6084/m9.figshare.3113512
title: A qualitative study of barriers to accessing water, sanitation and hygiene for disabled people in Malawi.

description: These are transcripts from In-depth interviews with 36 individuals with disability in Malawi (and their carers in some cases). <br>The study took place in 10 Traditional Authorities (TAs) and townships in Malawi (See Table 1). These were purposively selected from across the Northern, Central and Southern regions. Data collection was done through local languages and with the support of three field assistants from the Federation for Disabled People in Malawi (all of them disabled people). Data collection took place between July and October 2014. Respondents were purposively sampled to reflect a range of impairments as well as variety in location and socio-demographic characteristics. The sample was not intended to be statistically representative. Respondents in each TA were identified through a two-step process beginning with consultation of ‘key informants’ who included village chiefs, representatives of Disabled Persons Organisations (DPOs), local social welfare officers and other service providers. Following the Washington Group short list of screening questions (18), key informants were asked to identify individuals in their community who they thought would experience ‘some difficulty’, ‘a lot of difficulty’ or be ‘unable to do’ any of six specified activities: seeing, hearing, walking, remembering/understanding, communicating and self-care. Lists of up to 20 names, along with descriptions of each individual’s impairment type, were generated by key informants in each region. Based on these lists the research team purposively selected participants based on impairment type, gender, age and geographical location. The second step in the process involved the research team confirming the eligibility (determined by having at least ‘some difficulty’ in doing at least one of the six activities) of each of the purposively selected participants using the same short set of questions with the participant and/or the caregiver.The study employed a range of participatory and qualitative methods. These included free listing and ranking of priorities, Photovoice, observation, emotion mapping, WASH demonstrations and in-depth interviews. These methods drew on tools developed by the Water, Engineering and Development Centre (WEDC) at Loughborough University(19), WaterAid, The Centre for Evidence in Disability at the London School of Hygiene and Tropical Medicine and the Leonard Cheshire Disability and Inclusive Development Centre (LCDIDC) at University College London. All research tools are available at: http://ehg.lshtm.ac.uk/wash-disability. The data provided is principally from the in-depth interviews as data from some of the other methods could not be anonymised. <br> <br>
DOI: 10.6084/m9.figshare.3113518.v1
title: data_deposit.txt

description: We measured external morphological traits on 92 stream fishes of the Ozark Highlands ecoregion, Oklahoma following methods described by Gatz (1979) and Winemiller (1991). Fish specimens were acquired either via field sampling or from the Oklahoma State University Collection of Vertebrates. All specimens were preserved in 70% ethanol. We measured the traits using digital calipers.
DOI: 10.6084/m9.figshare.3113509
title: Tuits conversalud 07/03/2016

description: Tuits completos del hashtag #conversalud corrspondientes al debate celebrado en twitter sobre conversación y salud el 07/03/2016.
DOI: 10.6084/m9.figshare.3113512.v1
title: A qualitative study of barriers to accessing water, sanitation and hygiene for disabled people in Malawi.

description: These are transcripts from In-depth interviews with 36 individuals with disability in Malawi (and their carers in some cases). <br>The study took place in 10 Traditional Authorities (TAs) and townships in Malawi (See Table 1). These were purposively selected from across the Northern, Central and Southern regions. Data collection was done through local languages and with the support of three field assistants from the Federation for Disabled People in Malawi (all of them disabled people). Data collection took place between July and October 2014. Respondents were purposively sampled to reflect a range of impairments as well as variety in location and socio-demographic characteristics. The sample was not intended to be statistically representative. Respondents in each TA were identified through a two-step process beginning with consultation of ‘key informants’ who included village chiefs, representatives of Disabled Persons Organisations (DPOs), local social welfare officers and other service providers. Following the Washington Group short list of screening questions (18), key informants were asked to identify individuals in their community who they thought would experience ‘some difficulty’, ‘a lot of difficulty’ or be ‘unable to do’ any of six specified activities: seeing, hearing, walking, remembering/understanding, communicating and self-care. Lists of up to 20 names, along with descriptions of each individual’s impairment type, were generated by key informants in each region. Based on these lists the research team purposively selected participants based on impairment type, gender, age and geographical location. The second step in the process involved the research team confirming the eligibility (determined by having at least ‘some difficulty’ in doing at least one of the six activities) of each of the purposively selected participants using the same short set of questions with the participant and/or the caregiver.The study employed a range of participatory and qualitative methods. These included free listing and ranking of priorities, Photovoice, observation, emotion mapping, WASH demonstrations and in-depth interviews. These methods drew on tools developed by the Water, Engineering and Development Centre (WEDC) at Loughborough University(19), WaterAid, The Centre for Evidence in Disability at the London School of Hygiene and Tropical Medicine and the Leonard Cheshire Disability and Inclusive Development Centre (LCDIDC) at University College London. All research tools are available at: http://ehg.lshtm.ac.uk/wash-disability. The data provided is principally from the in-depth interviews as data from some of the other methods could not be anonymised. <br> <br>
DOI: 10.6084/m9.figshare.3113509.v1
title: Tuits conversalud 07/03/2016

description: Tuits completos del hashtag #conversalud corrspondientes al debate celebrado en twitter sobre conversación y salud el 07/03/2016.
DOI: 10.6084/m9.figshare.3113467
title: Antioxidant enzyme responses induced by whiteflies in tobacco plants in defense against aphids: Catalase may play a dominant role

description: Antioxidant enzyme responses induced by whiteflies in tobacco plants in defense against aphids: Catalase may play a dominant role
DOI: 10.6084/m9.figshare.3113488
title: Pan-Grass Syntenic Gene Set (sorghum referenced)

description: Syntenic gene lists for sorghum, both maize subgenomes, setaria italica, setaria viridis, oropetium, rice, and brachypodium. Initial homology search conducted with lastz. Syntenic regions identified using QuotaAlign (https://github.com/tanghaibao/quota-alignment). One to one gene pair identification performed using the method describe in Zhang et al 2017. <br>Please cite:<br>Zhang Y, Ngu DW, Carvalho D, Liang Z, Qiu Y, Roston RL, Schnable JC. (2017) “Differentially regulated orthologs in sorghum and the subgenomes of maize.” The Plant Cell doi: 10.1105/tpc.17.00354 bioRxiv preprint doi: 10.1101/120303
DOI: 10.6084/m9.figshare.3113449
title: Character classification data for license plates

description: <b>Licence Plate Character Classification Data</b><br><br>Authors:<br>Rohit Rawat, Dr. M. T. Manry, Fernando Martinez<br>Image Processing and Neural Networks Lab<br>The University of Texas at Arlington<br>http://www.uta.edu/faculty/manry/<br><br>This dataset has 49 numerical features extracted from character images extracted from license plate images. The dataset has 12757 images extracted from plate images split into training and testing sets. The data has 36 output classes belonging to letters 'A' to 'Z' excluding the characters 'O' and 'Q', numbers '0' to '9', and two state map characters.<br><br>Data is tab separated, one line per example, with the correct class between 1 and 36 at the end of the line.<br><br>This data should be cited as:<br>Rawat, Rohit; Manry, M.T.; Martinez, Fernando (2016): Character classification data for license plates. figshare. https://dx.doi.org/10.6084/m9.figshare.3113449.v1<br><br>
DOI: 10.6084/m9.figshare.3113467.v1
title: Antioxidant enzyme responses induced by whiteflies in tobacco plants in defense against aphids: Catalase may play a dominant role

description: Antioxidant enzyme responses induced by whiteflies in tobacco plants in defense against aphids: Catalase may play a dominant role
DOI: 10.6084/m9.figshare.3113422
title: Nearest Neighbor Permutation Test Results

description: This is Supplemental Fileset S1, from Appendix D of my dissertation (R. Vandegrift. 2016. <i>Ecological Roles of Fungal Endophytes.</i> University of Oregon, Eugene, OR.) <br>This fileset contains the results of permutational nearest neighbor analysis described in Chapter V. There are R data files, and contain lists of dataframes with the relevant information: rows are observed mean nearest neighbor distance (d bar sub o), expected mean nearest neighbor distance (d bar sub e), the standard deviation around d bar sub e, the percent of permutations where d bar was less than d bar sub o (p-value), the value of d bar for which 5% of permutations were larger, and the value of d bar for which 5% of permutations were smaller. Columns are distance classes. Results are presented for all available distance classes.
DOI: 10.6084/m9.figshare.3113416
title: Figure S4

description: Weight of inguinal fat depot (A) and total body fat content (B) of wild-type (Wt) and mir-499 Tg mice. Weight of inguinal fat depot (C) and total body fat content (D) of Wt and Sox6 mKO mice.<b> </b>
DOI: 10.6084/m9.figshare.3113419
title: Figure S5

description: Glucose tolerance test (GTT) of wild-type (Wt) and mir-499 Tg mice. GTT of Wt and Sox6 mKO mice.Oxygen consumption (VO<sub>2</sub>) of Wt and Sox6 mKO mice over a 24-hour period.
DOI: 10.6084/m9.figshare.3113422.v1
title: Nearest Neighbor Permutation Test Results

description: This is Supplemental Fileset S1, from Appendix D of my dissertation (R. Vandegrift. 2016. <i>Ecological Roles of Fungal Endophytes.</i> University of Oregon, Eugene, OR.) <br>This fileset contains the results of permutational nearest neighbor analysis described in Chapter V. There are R data files, and contain lists of dataframes with the relevant information: rows are observed mean nearest neighbor distance (d bar sub o), expected mean nearest neighbor distance (d bar sub e), the standard deviation around d bar sub e, the percent of permutations where d bar was less than d bar sub o (p-value), the value of d bar for which 5% of permutations were larger, and the value of d bar for which 5% of permutations were smaller. Columns are distance classes. Results are presented for all available distance classes.
DOI: 10.6084/m9.figshare.3113407
title: Fig5

description: Expression of adipogenic markers from 3T3-L1 cells by qPCR after four days of adipogenic induction using control, myoblast CM or myotube CM. Percentage of BrdU-positive (BrdU+) 3T3-L1 cells incubated in control, myoblast CM or myotube CM for 12 hours during clonal expansion. Expression of adipogenic markers from stromal vascular fraction (SVF) of subcutaneous fat by qPCR after four days of adipogenic induction using conditioned media from wild-type (Wt) or Sox6 mKO gastrocnemius muscle with supplemented insulin.
DOI: 10.6084/m9.figshare.3113413
title: Turbine Attitudes Survey Data.xlsx

description: Dataset from a survey of public attitudes towards small wind turbines in the UK in 2013-2014. The survey focussed on the acceptability of small wind turbines in different settings and factors that explained acceptance, as well as any concerns.The data is split into sections that match the sections of the questionnaire, as well as further coding of comments made by respondents. The questionnaire is available in the supplementary material of the following paper: Tatchley <i>et al. </i>2016 Drivers of public attitudes towards small wind turbines in the UK. PLOS ONE <i>(in press). </i>Further detail on the coding of responses is presented in the first tab of the spreadsheet.
DOI: 10.6084/m9.figshare.3113467.v2
title: Antioxidant enzyme responses induced by whiteflies in tobacco plants in defense against aphids: Catalase may play a dominant role

description: Antioxidant enzyme responses induced by whiteflies in tobacco plants in defense against aphids: Catalase may play a dominant role
DOI: 10.6084/m9.figshare.3113419.v1
title: Figure S5

description: Glucose tolerance test (GTT) of wild-type (Wt) and mir-499 Tg mice. GTT of Wt and Sox6 mKO mice.Oxygen consumption (VO<sub>2</sub>) of Wt and Sox6 mKO mice over a 24-hour period.
DOI: 10.6084/m9.figshare.3113407.v1
title: Fig5

description: Expression of adipogenic markers from 3T3-L1 cells by qPCR after four days of adipogenic induction using control, myoblast CM or myotube CM. Percentage of BrdU-positive (BrdU+) 3T3-L1 cells incubated in control, myoblast CM or myotube CM for 12 hours during clonal expansion. Expression of adipogenic markers from stromal vascular fraction (SVF) of subcutaneous fat by qPCR after four days of adipogenic induction using conditioned media from wild-type (Wt) or Sox6 mKO gastrocnemius muscle with supplemented insulin.
DOI: 10.6084/m9.figshare.3113467.v3
title: Antioxidant enzyme responses induced by whiteflies in tobacco plants in defense against aphids: Catalase may play a dominant role

description: Antioxidant enzyme responses induced by whiteflies in tobacco plants in defense against aphids: Catalase may play a dominant role
DOI: 10.6084/m9.figshare.3113398
title: Fig3D,F

description: qPCR of adipogenic markers from adipogenically-induced SV cells isolated from subcutaneous adipose depots from Wt and mir-499 Tg mice. qPCR of adipogenic markers from adipogenically-induced SVF isolated from subcutaneous adipose depots from Wt and Sox6 mKO mice. Error bars indicate SEM. Statistical significance assessed by two-tailed Student’s t-test. <sup>*</sup>p&lt;0.05, <sup>**</sup>p&lt;0.01.
DOI: 10.6084/m9.figshare.3113401
title: Fig4 499

description: Weekly weight change during high fat diet (HFD) feeding of wild-type (Wt) and miR-499 Tg female mice. Inguinal (IWAT) fat pads were removed from Wt and miR-499 Tg female mice after 5 weeks of HFD.