cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.4r6wjg
title: Occurrence Download

description: A dataset containing 80 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinus ayacahuite Ehrend."
 ]
}

 The dataset includes 80 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017252-180131172636756/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vevr3e
title: Occurrence Download

description: A dataset containing 43 species occurrences available in GBIF matching the query:
{
 "and" : [
 "InstitutionCode is moscow state university",
 "TaxonKey is Schtschurowskia Regel & Schmalh. ex Regel"
 ]
}

 The dataset includes 43 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0049235-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.47aa7r
title: Occurrence Download

description: A dataset containing 126031 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mosquito Occurrence Dataset"
 ]
}

 The dataset includes 126031 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0169526-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wtbvpx
title: Occurrence Download

description: A dataset containing 8744 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "TaxonKey is Pycnonotus flaviventris (Tickell, 1833)"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8744 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017253-180508205500799/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kqn4mq
title: Occurrence Download

description: A dataset containing 19390419 species occurrences available in GBIF matching the query:
{
 "Country" : [
 "is Brazil"
 ]
}

 The dataset includes 19390419 records from 3281 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0169538-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3850756_d20.v1
title: Additional file 7: Table S3. of A comparison of Illumina and Ion Torrent sequencing platforms in the context of differential gene expression

description: Spearman correlation coefficients between Illumina and Ion Torrent read counts. Spearman correlation coefficients between Illumina and Ion Torrent read counts for each sample and aligner. (XLSX 11Â kb)
DOI: 10.15468/dl.awpzey
title: Occurrence Download

description: A dataset containing 194 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Beringraja rhina (Jordan & Gilbert, 1880)",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900",
 "CoordinateUncertaintyInMeters is less than or equal to 10000"
 ]
}

 The dataset includes 194 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039102-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3850756_d20
title: Additional file 7: Table S3. of A comparison of Illumina and Ion Torrent sequencing platforms in the context of differential gene expression

description: Spearman correlation coefficients between Illumina and Ion Torrent read counts. Spearman correlation coefficients between Illumina and Ion Torrent read counts for each sample and aligner. (XLSX 11Â kb)
DOI: 10.15468/dl.6qcuwd
title: Occurrence Download

description: A dataset containing 306 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Paralvinella grasslei Desbruyères & Laubier, 1982"
 ]
}

 The dataset includes 306 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039103-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3850756_d22.v1
title: Additional file 9: Table S4. of A comparison of Illumina and Ion Torrent sequencing platforms in the context of differential gene expression

description: Read count and differential expression results for all combinations of platform/aligner. Gene-level read counts from each sample, p-values from the Mann-Whitney U tests and limma for differential expression, Benjamini-Hochberg-corrected q-values. (XLSX 13131Â kb)
DOI: 10.6084/m9.figshare.c.3850756_d22
title: Additional file 9: Table S4. of A comparison of Illumina and Ion Torrent sequencing platforms in the context of differential gene expression

description: Read count and differential expression results for all combinations of platform/aligner. Gene-level read counts from each sample, p-values from the Mann-Whitney U tests and limma for differential expression, Benjamini-Hochberg-corrected q-values. (XLSX 13131Â kb)
DOI: 10.6084/m9.figshare.c.3850840_d2
title: Additional file 2: Table S2. of Characterisation of protein families in spider digestive fluids and their role in extra-oral digestion

description: Quantification data of identified proteins in all S. mimosarum and A. geniculata digestive fluid samples. (XLSX 151Â kb)
DOI: 10.6084/m9.figshare.c.3850840_d3.v1
title: Additional file 3: Table S3. of Characterisation of protein families in spider digestive fluids and their role in extra-oral digestion

description: Overview of quantities of proteins detected in both, venom and digestive fluid, for both study species, S. mimosarum and A. geniculata. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3850840_d3
title: Additional file 3: Table S3. of Characterisation of protein families in spider digestive fluids and their role in extra-oral digestion

description: Overview of quantities of proteins detected in both, venom and digestive fluid, for both study species, S. mimosarum and A. geniculata. (XLSX 12Â kb)
DOI: 10.6084/m9.figshare.c.3850852_d2.v1
title: Additional file 2: of Genetic architecture and temporal patterns of biomass accumulation in spring barley revealed by image analysis

description: Excel table with all SNPs that surpassed the FDR for at least one trait with mapping positions and â  log(p)-values over all traits. (XLSX 46Â kb)
DOI: 10.6084/m9.figshare.c.3850852_d2
title: Additional file 2: of Genetic architecture and temporal patterns of biomass accumulation in spring barley revealed by image analysis

description: Excel table with all SNPs that surpassed the FDR for at least one trait with mapping positions and â  log(p)-values over all traits. (XLSX 46Â kb)
DOI: 10.6084/m9.figshare.c.3850858_d3.v1
title: Additional file 3: Table S2. of Nutrient supply affects the mRNA expression profile of the porcine skeletal muscle

description: Pathways identified by ReactomeFIViz as enriched in differentially expressed genes (q-value &lt;0.05 and |fold-change| &gt; 1 .5). Three conditions were compared: fasting (T0), 5 h after eating (T1) and 7 h after eating (T2). (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3850858_d2.v1
title: Additional file 2: Table S1. of Nutrient supply affects the mRNA expression profile of the porcine skeletal muscle

description: Differentially expressed genes (q-value &lt;0.05 and |fold-change| &gt; 1.5) in the pig gluteus medius muscle at fasting (T0) vs 5 h (T1) vs 7 h (T2) after eating. (XLSX 900 kb)
DOI: 10.6084/m9.figshare.c.3850858_d2
title: Additional file 2: Table S1. of Nutrient supply affects the mRNA expression profile of the porcine skeletal muscle

description: Differentially expressed genes (q-value &lt;0.05 and |fold-change| &gt; 1.5) in the pig gluteus medius muscle at fasting (T0) vs 5 h (T1) vs 7 h (T2) after eating. (XLSX 900 kb)
DOI: 10.6084/m9.figshare.c.3850858_d4.v1
title: Additional file 4: Table S3 of Nutrient supply affects the mRNA expression profile of the porcine skeletal muscle

description: Gene regulatory networks identified with the ReactomeFIViz app, considering GO biological process, molecular function and cellular component (q-value&lt;0.05). (XLSX 50 kb)
DOI: 10.6084/m9.figshare.c.3850858_d3
title: Additional file 3: Table S2. of Nutrient supply affects the mRNA expression profile of the porcine skeletal muscle

description: Pathways identified by ReactomeFIViz as enriched in differentially expressed genes (q-value &lt;0.05 and |fold-change| &gt; 1 .5). Three conditions were compared: fasting (T0), 5 h after eating (T1) and 7 h after eating (T2). (XLSX 13 kb)
DOI: 10.6084/m9.figshare.c.3851758_d2
title: Additional file 2: of LSD1 dual function in mediating epigenetic corruption of the vitamin D signaling in prostate cancer

description: Raw results from the regulome explorer analysis for LSD1 and DNMT1. (CSV 36Â kb)
DOI: 10.5517/ccdc.csd.cc2hydsn
title: CCDC 2322172: Experimental Crystal Structure Determination

description: Related Article: Khawla Boudebbous, Mehdi Boutebdja, Paul J. Bernard, Lhassane Ismaili, Thierry Roisnel, Anthony Robert, Dominique Harakat, Mahdi Hamdi, Houssem Boulebd|2025|J.Mol.Struct.|1323|140672|doi:10.1016/j.molstruc.2024.140672
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hydtp
title: CCDC 2322173: Experimental Crystal Structure Determination

description: Related Article: Khawla Boudebbous, Mehdi Boutebdja, Paul J. Bernard, Lhassane Ismaili, Thierry Roisnel, Anthony Robert, Dominique Harakat, Mahdi Hamdi, Houssem Boulebd|2025|J.Mol.Struct.|1323|140672|doi:10.1016/j.molstruc.2024.140672
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hydvq
title: CCDC 2322174: Experimental Crystal Structure Determination

description: Related Article: Khawla Boudebbous, Mehdi Boutebdja, Paul J. Bernard, Lhassane Ismaili, Thierry Roisnel, Anthony Robert, Dominique Harakat, Mahdi Hamdi, Houssem Boulebd|2025|J.Mol.Struct.|1323|140672|doi:10.1016/j.molstruc.2024.140672
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3851740_d5.v1
title: Additional file 5: Table S3. of MicroRNA expression in bone marrow-derived human multipotent Stromal cells

description: Common miRNA Sequences Expressed by 8 Different Donors at Three Passages. (XLS 38Â kb)
DOI: 10.5517/ccdc.csd.cc2hydwr
title: CCDC 2322175: Experimental Crystal Structure Determination

description: Related Article: Khawla Boudebbous, Mehdi Boutebdja, Paul J. Bernard, Lhassane Ismaili, Thierry Roisnel, Anthony Robert, Dominique Harakat, Mahdi Hamdi, Houssem Boulebd|2025|J.Mol.Struct.|1323|140672|doi:10.1016/j.molstruc.2024.140672
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3851740_d5
title: Additional file 5: Table S3. of MicroRNA expression in bone marrow-derived human multipotent Stromal cells

description: Common miRNA Sequences Expressed by 8 Different Donors at Three Passages. (XLS 38Â kb)
DOI: 10.5517/ccdc.csd.cc2hydxs
title: CCDC 2322176: Experimental Crystal Structure Determination

description: Related Article: Khawla Boudebbous, Mehdi Boutebdja, Paul J. Bernard, Lhassane Ismaili, Thierry Roisnel, Anthony Robert, Dominique Harakat, Mahdi Hamdi, Houssem Boulebd|2025|J.Mol.Struct.|1323|140672|doi:10.1016/j.molstruc.2024.140672
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hydyt
title: CCDC 2322177: Experimental Crystal Structure Determination

description: Related Article: Khawla Boudebbous, Mehdi Boutebdja, Paul J. Bernard, Lhassane Ismaili, Thierry Roisnel, Anthony Robert, Dominique Harakat, Mahdi Hamdi, Houssem Boulebd|2025|J.Mol.Struct.|1323|140672|doi:10.1016/j.molstruc.2024.140672
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hydzv
title: CCDC 2322178: Experimental Crystal Structure Determination

description: Related Article: Khawla Boudebbous, Mehdi Boutebdja, Paul J. Bernard, Lhassane Ismaili, Thierry Roisnel, Anthony Robert, Dominique Harakat, Mahdi Hamdi, Houssem Boulebd|2025|J.Mol.Struct.|1323|140672|doi:10.1016/j.molstruc.2024.140672
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.15468/dl.cp4rhe
title: Occurrence Download

description: A dataset containing 153 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Adinandra millettii (Hook. & Arn.) Benth. & Hook.fil. ex Hance",
 "Year 1970-2000"
 ]
}

 The dataset includes 153 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0039104-241126133413365/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.c.3851746_d2.v1
title: Additional file 2: Table S2. of Lrp, a global regulator, regulates the virulence of Vibrio vulnificus

description: Lrp target genes identified by transcriptome comparison. (XLSX 427Â kb)
DOI: 10.6084/m9.figshare.c.3851746_d2
title: Additional file 2: Table S2. of Lrp, a global regulator, regulates the virulence of Vibrio vulnificus

description: Lrp target genes identified by transcriptome comparison. (XLSX 427Â kb)
DOI: 10.6084/m9.figshare.c.3851749_d2.v1
title: Additional file 2: Table S3. of Leveraging network analytics to infer patient syndrome and identify causal genes in rare disease cases

description: This table lists the detailed results used for benchmarking and comparison analysis. In particular, for all 27 patient cases it shows the observed clinical phenotypes used as input, as well as all corresponding previously known causal genes. It also shows ranking of causal genes in PDR (after running analyses in Ingenuity Variant Analysis taking whole genome data as input), the corresponding disease inferred by PDR, and causal variant properties. For comparison, the rank of the causal gene obtained from Phenolyzer is also shown. (XLSX 34 kb)
DOI: 10.5517/ccdc.csd.cc2jvy5j
title: CCDC 2349588: Experimental Crystal Structure Determination

description: Related Article: Ravallika Aluri, Aishwarya Natarajan, Tarun Patel, Darakhshan Begum, Jyothi Kumari, Dharmarajan Sriram, Balaram Ghosh, Krishnan Rangan|2025|J.Mol.Struct.|1323|140729|doi:10.1016/j.molstruc.2024.140729
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3851740_d7.v1
title: Additional file 7: Table S4. of MicroRNA expression in bone marrow-derived human multipotent Stromal cells

description: Significantly Different miRNA expression between Cancer [2 samples: Universal RNA & NT2] and MSCs [8 donors at passage 3]. Positive fold change indicates upregulation in cancer samples and negative fold change indicates down regulation in cancer samples. (XLS 33Â kb)
DOI: 10.5517/ccdc.csd.cc2jwk66
title: CCDC 2350178: Experimental Crystal Structure Determination

description: Related Article: Alexandros A. Kitos, Darren Herweyer, Niki Mavragani, Stéphanie Delisle, Benoit Jolicoeur, Muralee Murugesu, Jaclyn L. Brusso|2024|Cryst.Growth Des.|24|9877|doi:10.1021/acs.cgd.4c00843
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3851749_d2
title: Additional file 2: Table S3. of Leveraging network analytics to infer patient syndrome and identify causal genes in rare disease cases

description: This table lists the detailed results used for benchmarking and comparison analysis. In particular, for all 27 patient cases it shows the observed clinical phenotypes used as input, as well as all corresponding previously known causal genes. It also shows ranking of causal genes in PDR (after running analyses in Ingenuity Variant Analysis taking whole genome data as input), the corresponding disease inferred by PDR, and causal variant properties. For comparison, the rank of the causal gene obtained from Phenolyzer is also shown. (XLSX 34 kb)
DOI: 10.5517/ccdc.csd.cc2jwk77
title: CCDC 2350179: Experimental Crystal Structure Determination

description: Related Article: Alexandros A. Kitos, Darren Herweyer, Niki Mavragani, Stéphanie Delisle, Benoit Jolicoeur, Muralee Murugesu, Jaclyn L. Brusso|2024|Cryst.Growth Des.|24|9877|doi:10.1021/acs.cgd.4c00843
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k40b2
title: CCDC 2357343: Experimental Crystal Structure Determination

description: Related Article: Febee R. Louka, Lily G. Ortte, Madison R. Maier, Nahed M.H. Salem, Ana Torvisco, Roland C. Fischer, Franz A. Mautner, Salah S. Massoud|2025|J.Mol.Struct.|1323|140693|doi:10.1016/j.molstruc.2024.140693
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2k40c3
title: CCDC 2357344: Experimental Crystal Structure Determination

description: Related Article: Febee R. Louka, Lily G. Ortte, Madison R. Maier, Nahed M.H. Salem, Ana Torvisco, Roland C. Fischer, Franz A. Mautner, Salah S. Massoud|2025|J.Mol.Struct.|1323|140693|doi:10.1016/j.molstruc.2024.140693
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.c.3851779_d1.v1
title: Additional file 1: of Bortezomib treatment induces a higher mortality rate in lupus model mice with a higher disease activity

description: is a table presenting significantly upregulated and downregulated genes in spleens of Bz-treated and Cyc-treated mice. Six hours after injection of 14-week-old MRL/lpr mice with vehicle (control, n = 4), Bz (n = 4), or Cyc (n = 3), mRNA of spleens was analyzed with SurePrint G3 Mouse GE 8 × 60 K Microarray (Agilent Technologies). Compared with control mice, significantly increased (&gt;2-fold) and decreased (&lt;0.5-fold) genes were extracted using Gene Spring software applying a modified t test. (XLSX 24 kb)
DOI: 10.6084/m9.figshare.c.3851740_d9
title: Additional file 9: Table S6. of MicroRNA expression in bone marrow-derived human multipotent Stromal cells

description: Raw Cq values of the miRNA RT-qPCR. (XLSX 48Â kb)
DOI: 10.6084/m9.figshare.c.3851773_d5
title: Additional file 5: of Knowledge-guided gene prioritization reveals new insights into the mechanisms of chemoresistance

description: List of 137 genes that were among the top 500 Robust-ProGENI-identified genes for at least 40 (over a quarter of 139 studied) treatments in the GDSC dataset (sheet 1). Also includes pathway and Gene Ontology enrichment analysis results of this set (sheet 2). (XLSX 126 kb)
DOI: 10.6084/m9.figshare.c.3851779_d1
title: Additional file 1: of Bortezomib treatment induces a higher mortality rate in lupus model mice with a higher disease activity

description: is a table presenting significantly upregulated and downregulated genes in spleens of Bz-treated and Cyc-treated mice. Six hours after injection of 14-week-old MRL/lpr mice with vehicle (control, n = 4), Bz (n = 4), or Cyc (n = 3), mRNA of spleens was analyzed with SurePrint G3 Mouse GE 8 × 60 K Microarray (Agilent Technologies). Compared with control mice, significantly increased (&gt;2-fold) and decreased (&lt;0.5-fold) genes were extracted using Gene Spring software applying a modified t test. (XLSX 24 kb)
DOI: 10.6084/m9.figshare.c.3851773_d6.v1
title: Additional file 6: of Knowledge-guided gene prioritization reveals new insights into the mechanisms of chemoresistance

description: List of genes and drugs in each bicluster corresponding to Fig.Â 4. Also includes pathway enrichment analysis results of each of these biclusters. (XLSX 92 kb)