cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.746968.v4
title: Popgen Stats from Hufford et al. 2012 Nat. Gen.

description: Summary statistics for the maize v2 filtered gene set. Data are from Hufford et al. 2012: http://www.nature.com/ng/journal/v44/n7/full/ng.2309.html See details in the paper for criteria for calling SNPs, data used for statistics, etc.
DOI: 10.6084/m9.figshare.746968.v5
title: Popgen Stats from Hufford et al. 2012 Nat. Gen.

description: Summary statistics for the maize v2 filtered gene set. and genome-wide 10kb windows. Data are from Hufford et al. 2012: http://www.nature.com/ng/journal/v44/n7/full/ng.2309.html See details in the paper for criteria for calling SNPs, data used for statistics, etc.
DOI: 10.6084/m9.figshare.746968.v7
title: Popgen Stats from Hufford et al. 2012 Nat. Gen.

description: Summary statistics for 10kb windows genome-wide and for genes in the maize v2 filtered gene set. Data are from Hufford et al. 2012: http://www.nature.com/ng/journal/v44/n7/full/ng.2309.html See details in the paper for criteria for calling SNPs, data used for statistics, etc. Columns are: locus: GRM name of gene in the filtered gene set S: number of Segregating sites ThetaW: Watterson's estimate of theta (per locus) ThetaPi: nucleotide diversity (per locus) ThetaH: Fay and Wu (2000) estimator (per locus) TajD: Tajima's D seqbp: # of bp sequenced. this should be used as the denominator to calculate per bp. values of the above statistics.
DOI: 10.6084/m9.figshare.746915
title: Thesis Dispersion Diagrams

description: MATLAB figure files for the dispersion diagrams presented in chapters three and four of my doctoral thesis.
DOI: 10.6084/m9.figshare.746915.v1
title: Thesis Dispersion Diagrams

description: MATLAB figure files for the dispersion diagrams presented in chapters three and four of my doctoral thesis.
DOI: 10.6084/m9.figshare.746968.v6
title: Gene Popgen Stats from Hufford et al. 2012 Nat. Gen.

description: Summary statistics for genes in the maize v2 filtered gene set. Data are from Hufford et al. 2012: http://www.nature.com/ng/journal/v44/n7/full/ng.2309.html See details in the paper for criteria for calling SNPs, data used for statistics, etc. Columns are: locus: GRM name of gene in the filtered gene set S: number of Segregating sites ThetaW: Watterson's estimate of theta (per locus) ThetaPi: nucleotide diversity (per locus) ThetaH: Fay and Wu (2000) estimator (per locus) TajD: Tajima's D seqbp: # of bp sequenced. this should be used as the denominator to calculate per bp. values of the above statistics.
DOI: 10.6084/m9.figshare.745810
title: BESSE: Model for Bacteriophage Evolution in a Spatially Structured Environment

description: Provided here is an individual-based, stochastic cellular automata model (interacting particle system) that simulates the growth and evolution of a bacteriophage population in a spatially structured environment.
DOI: 10.6084/m9.figshare.746899.v1
title: Gaussian Job Archive for C22H30MoN4S4

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.745801
title: Spatial Analysis in R workshop July 2013

description: The contents of this fileset come from a Spatial Analysis in R workshop run on 12th July 2013 by the British Ecological Society (BES) Macroecology and Computational Ecology special interest groups. The PDF includes links to workshop materials and further useful info. The textfiles are some extra example code for macroecological analysis.
DOI: 10.6084/m9.figshare.745810.v1
title: BESSE: Model for Bacteriophage Evolution in a Spatially Structured Environment

description: Provided here is an individual-based, stochastic cellular automata model (interacting particle system) that simulates the growth and evolution of a bacteriophage population in a spatially structured environment.
DOI: 10.6084/m9.figshare.745790
title: Ferrocene Carboxylic acid diffusion through a porous membrane

description: ChronoAmp signal from the reduction of ferrocene carboxylic acid diffusing through a membrane to an electrode. Aim was to study diffusion times.
DOI: 10.6084/m9.figshare.745790.v1
title: Ferrocene Carboxylic acid diffusion through a porous membrane

description: ChronoAmp signal from the reduction of ferrocene carboxylic acid diffusing through a membrane to an electrode. Aim was to study diffusion times.
DOI: 10.6084/m9.figshare.745781
title: State changes in posture and arch of the foot in children aged 4 - 6 years with hypermobility of the joints under the influence of rehabilitation activities in schools

description: . The effect of the rehabilitation activities in educational institutions on the dynamics of changes in the state and posture of the foot arch in children. The study involved 446 children aged from 4 to 6 years. The rehabilitation program lasted 10 weeks and consisted of 3 periods. Found that 35.88% of healthy children had impaired posture in the sagittal plane. Flatfoot detected in 64.46% of children with joint hypermobility. After the implementation of the rehabilitation program the value of the brachial arch indicators declined in children 3 major groups, respectively, 32.85 cm, 33.24 cm and 33.92 cm in all major groups established downward trend in the proportion of children with kyphotic posture and flat feet. The positive dynamics of changes in the values of posture in the sagittal plane was observed among children of all 3 major groups: shoulder width increased respectively by 1.55%, 3.09%, 4.77%.
DOI: 10.6084/m9.figshare.745781.v1
title: State changes in posture and arch of the foot in children aged 4 - 6 years with hypermobility of the joints under the influence of rehabilitation activities in schools

description: . The effect of the rehabilitation activities in educational institutions on the dynamics of changes in the state and posture of the foot arch in children. The study involved 446 children aged from 4 to 6 years. The rehabilitation program lasted 10 weeks and consisted of 3 periods. Found that 35.88% of healthy children had impaired posture in the sagittal plane. Flatfoot detected in 64.46% of children with joint hypermobility. After the implementation of the rehabilitation program the value of the brachial arch indicators declined in children 3 major groups, respectively, 32.85 cm, 33.24 cm and 33.92 cm in all major groups established downward trend in the proportion of children with kyphotic posture and flat feet. The positive dynamics of changes in the values of posture in the sagittal plane was observed among children of all 3 major groups: shoulder width increased respectively by 1.55%, 3.09%, 4.77%.
DOI: 10.6084/m9.figshare.745763
title: Results summary for Comparative evaluation of platforms for parallel Ant Colony Optimization

description: Summary of results for Comparative evaluation of platforms for parallel Ant Colony Optimization Gines D. Guerrero · Jose M. Cecilia · Jose M. Garcia · Martyn Amos · Manuel Ujaldon (submitted, 2013).
DOI: 10.6084/m9.figshare.745763.v1
title: Results summary for Comparative evaluation of platforms for parallel Ant Colony Optimization

description: Summary of results for Comparative evaluation of platforms for parallel Ant Colony Optimization Gines D. Guerrero · Jose M. Cecilia · Jose M. Garcia · Martyn Amos · Manuel Ujaldon (submitted, 2013).
DOI: 10.6084/m9.figshare.745379
title: Files compiler AG Cell Cycle

description: Files compiler AG Cell Cycle
DOI: 10.6084/m9.figshare.745376
title: Gaussian Job Archive for C30H17(1+)

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.745379.v1
title: Files compiler AG Cell Cycle

description: Files compiler AG Cell Cycle
DOI: 10.6084/m9.figshare.745376.v1
title: Gaussian Job Archive for C30H17(1+)

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.745374
title: Gaussian Job Archive for C30H17(1+)

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.745375
title: Gaussian Job Archive for C30H17(1+)

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.745374.v1
title: Gaussian Job Archive for C30H17(1+)

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.745375.v1
title: Gaussian Job Archive for C30H17(1+)

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.745365
title: British Geological Survey

description: This is the dataset of the British Geological Survey as it can be found at: http://data.bgs.ac.uk/ The only difference with that dataset is that the quotation marks used in the files have been corrected to be parseable using the RDF triple store SESAME.
DOI: 10.6084/m9.figshare.745364
title: AIFB DataSet

description: Dataset describing the AIFB research portal. First used for machine learning with RDF in Bloehdorn, Stephan and Sure, York, "Kernel Methods for Mining Instance Data in Ontologies", The Semantic Web (2008), http://dx.doi.org/10.1007/978-3-540-76298-0_5. Please cite that paper when using this dataset.
DOI: 10.6084/m9.figshare.745353
title: Display HTML demo

description: Display HTML demo
DOI: 10.6084/m9.figshare.745321
title: Dissertation Proposal

description: Long and short versions of my dissertation proposal. The "pregenerals" one is the longer version. The one marked "final" is the short 10 pager for circulation in the Department.
DOI: 10.6084/m9.figshare.745316
title: TGFb superfamily tree

description: The raw phylogenetic tree used to construct figure 2 in http://dx.doi.org/10.1016/j.cytogfr.2013.06.003 This file can be opened and explored with MEGA5 (http://www.megasoftware.net/) to reveal relationships between other superfamily members not explored in the above review. However due to the large number of sometimes fragmentory sequences used, and poor bootstropping values in some cases, care should be taken to avoid over interpretation of these relationships. Part of file set: http://dx.doi.org/10.6084/m9.figshare.745298
DOI: 10.6084/m9.figshare.745318
title: Platelet as a drug target for Dengue Haemorrhagic Fever

description: Abstract Dengue infection is the fastest spreading mosquito borne disease in the world. More than 2.5billion people spread over more than 100 countries are at risk. Thrombocytopenia is a key clinical feature and around 500,000 people annually develop the more severe form of this infection known as severe dengue (Dengue Haemorrhagic Fever/ Dengue Shock Syndrome). Platelets are key in the pathogenesis of severe dengue. Platelets have a cardinal role in haemostatic function and innate immunity, both of which are compromised in severe dengue. There are currently no drug treatments or vaccines available for dengue infection. The review highlights the role of platelets in humans and integrates the pathology seen in dengue with the known physiology. It also gives an insight on the drug targets being researched and why platelets should be considered as a drug target in dengue haemorrhagic fever. ( The section <strong>'Platelet conundrum'</strong> is the main section and should be read if there is a lack of time)
DOI: 10.6084/m9.figshare.745316.v1
title: TGFb superfamily tree

description: The raw phylogenetic tree used to construct figure 2 in http://dx.doi.org/10.1016/j.cytogfr.2013.06.003 This file can be opened and explored with MEGA5 (http://www.megasoftware.net/) to reveal relationships between other superfamily members not explored in the above review. However due to the large number of sometimes fragmentory sequences used, and poor bootstropping values in some cases, care should be taken to avoid over interpretation of these relationships. Part of file set: http://dx.doi.org/10.6084/m9.figshare.745298
DOI: 10.6084/m9.figshare.745307
title: precipitation type videos

description: videos of copper silicate precpitating under different conditions
DOI: 10.6084/m9.figshare.745298
title: Evolution of TGFbeta and other relevant molecules

description: Presented here are a selection of figures relating to the evolution of bona fide TGFbeta, as well as it's binding partners and activators. This data was originally supplementary material for a paper in cytokine and growth factor reviews entitled "Unchaining the beast; insights from structural and evolutionary studies on TGFβ secretion, sequestration, and activation." Robertson I B, Rifkin D B. (http://dx.doi.org/10.1016/j.cytogfr.2013.06.003), but for editorial reasons it was not included in the final article. For figure description please see individual figshare entries: Data file for TGFbeta superfamily tree: http://dx.doi.org/10.6084/m9.figshare.745316 CEM mutations: http://dx.doi.org/10.6084/m9.figshare.745297 GARP evolution: http://dx.doi.org/10.6084/m9.figshare.745299 Integrin activation table: http://dx.doi.org/10.6084/m9.figshare.745300 TSP1 evolution http://dx.doi.org/10.6084/m9.figshare.745314 ROS sensitivity: http://dx.doi.org/10.6084/m9.figshare.745315
DOI: 10.6084/m9.figshare.745307.v1
title: precipitation type videos

description: videos of copper silicate precpitating under different conditions
DOI: 10.6084/m9.figshare.745296
title: Files compiler AG dGRN

description: Files compiler AG dGRN
DOI: 10.6084/m9.figshare.745298.v1
title: Evolution of TGFbeta and other relevant molecules

description: Presented here are a selection of figures relating to the evolution of bona fide TGFbeta, as well as it's binding partners and activators. This data was originally supplementary material for a paper in cytokine and growth factor reviews entitled "Unchaining the beast; insights from structural and evolutionary studies on TGFβ secretion, sequestration, and activation." Robertson I B, Rifkin D B. (http://dx.doi.org/10.1016/j.cytogfr.2013.06.003), but for editorial reasons it was not included in the final article. For figure description please see individual figshare entries: Data file for TGFbeta superfamily tree: http://dx.doi.org/10.6084/m9.figshare.745316 CEM mutations: http://dx.doi.org/10.6084/m9.figshare.745297 GARP evolution: http://dx.doi.org/10.6084/m9.figshare.745299 Integrin activation table: http://dx.doi.org/10.6084/m9.figshare.745300 TSP1 evolution http://dx.doi.org/10.6084/m9.figshare.745314 ROS sensitivity: http://dx.doi.org/10.6084/m9.figshare.745315
DOI: 10.6084/m9.figshare.745292
title: Kuchta 2009 PhD Dissertation

description: My 2009 PhD Dissertation in its entirety - everything you ever wanted to know about late Pleistocene terrestrial gastropod fossils from the Driftless Area of Wisconsin and Minnesota.
DOI: 10.6084/m9.figshare.745292.v1
title: Kuchta 2009 PhD Dissertation

description: My 2009 PhD Dissertation in its entirety - everything you ever wanted to know about late Pleistocene terrestrial gastropod fossils from the Driftless Area of Wisconsin and Minnesota.
DOI: 10.6084/m9.figshare.745296.v1
title: Files compiler AG dGRN

description: Files compiler AG dGRN
DOI: 10.6084/m9.figshare.745282
title: Kuchta 2009 Appendix E

description: Taphonomy of selected pleistocene gastropod fossil deposits - not enough complete data to warrant its own chapter, but work is ongoing to complete this study.
DOI: 10.6084/m9.figshare.745279
title: Kuchta 2009 Appendix D

description: Locations of late Pleistocene gastropod fossil sites found during this project.
DOI: 10.6084/m9.figshare.745280
title: Kuchta 2009 Appendix F

description: A chart to convert fossil localities into UW Geology Museum repository numbers.
DOI: 10.6084/m9.figshare.745281
title: Kuchta 2009 Bibliography

description: The complete bibliography for my 2009 dissertation Chapters 1 – 5 and appendices.
DOI: 10.6084/m9.figshare.745278
title: Kuchta 2009 Appendix B

description: Data screening methods used to evaluate the amino acid racemization data.
DOI: 10.6084/m9.figshare.745280.v1
title: Kuchta 2009 Appendix F

description: A chart to convert fossil localities into UW Geology Museum repository numbers.
DOI: 10.6084/m9.figshare.745281.v1
title: Kuchta 2009 Bibliography

description: The complete bibliography for my 2009 dissertation Chapters 1 – 5 and appendices.
DOI: 10.6084/m9.figshare.745282.v1
title: Kuchta 2009 Appendix E

description: Taphonomy of selected pleistocene gastropod fossil deposits - not enough complete data to warrant its own chapter, but work is ongoing to complete this study.
DOI: 10.6084/m9.figshare.745277
title: Kuchta 2009 Appendix A

description: Raw Amino Acid Racemization data for gastropods recovered from fluvial and colluvial sediments in the Upper Mississippi Valley
DOI: 10.6084/m9.figshare.745279.v1
title: Kuchta 2009 Appendix D

description: Locations of late Pleistocene gastropod fossil sites found during this project.
DOI: 10.6084/m9.figshare.745273
title: Gaussian Job Archive for C37H46ClMnN2O3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.745277.v1
title: Kuchta 2009 Appendix A

description: Raw Amino Acid Racemization data for gastropods recovered from fluvial and colluvial sediments in the Upper Mississippi Valley
DOI: 10.6084/m9.figshare.745278.v1
title: Kuchta 2009 Appendix B

description: Data screening methods used to evaluate the amino acid racemization data.
DOI: 10.6084/m9.figshare.745271
title: Gaussian Job Archive for C21H23N3O3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.745271.v1
title: Gaussian Job Archive for C21H23N3O3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.745273.v1
title: Gaussian Job Archive for C37H46ClMnN2O3

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.744844
title: Files compiler and examples AG WC

description: Files compiler and examples AG WC
DOI: 10.6084/m9.figshare.744845
title: Files compiler AG MA

description: Compiler generated in GenoCAD and grammar to be imported in GenoCAD for the Mass Action Grammar
DOI: 10.6084/m9.figshare.744845.v1
title: Files compiler AG MA

description: Compiler generated in GenoCAD and grammar to be imported in GenoCAD for the Mass Action Grammar
DOI: 10.6084/m9.figshare.744844.v1
title: Files compiler and examples AG WC

description: Files compiler and examples AG WC
DOI: 10.6084/m9.figshare.744841.v1
title: R files for the Tansley Lecture paper

description: Script and data files associated with the paper "Rapid Evolution: From Genes to Communities, and Back Again? The 2012 Tansley Lecture" by S.P. Ellner, published in Functional Ecology.
DOI: 10.6084/m9.figshare.743699
title: GSOD Weather NOAA

description: Average Daily Temperature at various sites throughout the US
DOI: 10.6084/m9.figshare.744800
title: Thesis Data (see link for details)

description: Describes several features of every cut of 65 news stories run on Japanese terrestrial television in Summer 2006. For each cut: Start and End time, duration, framinsg size, camera angles, presence of camera movement, portrayed spocial actors (inc gender and estimated age)
DOI: 10.6084/m9.figshare.744841.v2
title: R and data files for the Tansley Lecture paper

description: Script and data files associated with the paper "Rapid Evolution: From Genes to Communities, and Back Again? The 2012 Tansley Lecture" by S.P. Ellner, published in Functional Ecology.
DOI: 10.6084/m9.figshare.744800.v1
title: Thesis Data

description: Describes several features of every cut of 65 news stories run on Japanese terrestrial television in Summer 2006. For each cut: Start and End time, duration, framinsg size, camera angles, presence of camera movement, portrayed spocial actors (inc gender and estimated age)
DOI: 10.6084/m9.figshare.744800.v2
title: Thesis Data (see link for details)

description: Describes several features of every cut of 65 news stories run on Japanese terrestrial television in Summer 2006. For each cut: Start and End time, duration, framinsg size, camera angles, presence of camera movement, portrayed spocial actors (inc gender and estimated age)
DOI: 10.6084/m9.figshare.744841.v3
title: R and data files for the Tansley Lecture paper

description: Script and data files associated with the paper "Rapid Evolution: From Genes to Communities, and Back Again? The 2012 Tansley Lecture" by S.P. Ellner, published in Functional Ecology.
DOI: 10.6084/m9.figshare.743695
title: US_NOAA_GSOD_SAMPLE

description: Sample of Stations in the US recording surface metrics in collaboration with NOAA
DOI: 10.6084/m9.figshare.744841.v5
title: R and data files for the Tansley Lecture paper

description: Script and data files associated with the paper "Rapid Evolution: From Genes to Communities, and Back Again? The 2012 Tansley Lecture" by S.P. Ellner, published in Functional Ecology.
DOI: 10.6084/m9.figshare.744841.v4
title: R and data files for the Tansley Lecture paper

description: Script and data files associated with the paper "Rapid Evolution: From Genes to Communities, and Back Again? The 2012 Tansley Lecture" by S.P. Ellner, published in Functional Ecology.
DOI: 10.6084/m9.figshare.743015
title: Gaussian Job Archive for CCs6

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.743015.v1
title: Gaussian Job Archive for CCs6

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.743019
title: Trinity contigs 1lib NBF midgut An_steph

description: Trinity contigs 1lib NBF midgut An_steph
DOI: 10.6084/m9.figshare.743695.v1
title: US_NOAA_GSOD_SAMPLE

description: Sample of Stations in the US recording surface metrics in collaboration with NOAA
DOI: 10.6084/m9.figshare.743007
title: coelho_bioinformatics_2013

description: These are companion figures to the paper Luis Pedro Coelho, Joshua D. Kangas, Armaghan Naik, Elvira Osuna-Highley, Estelle Glory-Afshar, Margaret Fuhrman, Ramanuja Simha, Peter B. Berget, Jonathan W. Jarvik, and Robert F. Murphy, Determining the subcellular location of new proteins from microscope images using local features in Bioinformatics, 2013
DOI: 10.6084/m9.figshare.743019.v1
title: Trinity contigs 1lib NBF midgut An_steph

description: Trinity contigs 1lib NBF midgut An_steph
DOI: 10.6084/m9.figshare.741727
title: Bitly Measured Voice Clickstream Data

description: Clickstream data of .gov and .mil urls shortened by bitly.com and hosted on http://measuredvoice.com
DOI: 10.6084/m9.figshare.743001
title: Gaussian Job Archive for I8

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.
DOI: 10.6084/m9.figshare.741727.v1
title: Bitly Measured Voice Clickstream Data

description: Clickstream data of .gov and .mil urls shortened by bitly.com and hosted on http://measuredvoice.com
DOI: 10.6084/m9.figshare.743007.v2
title: coelho_bioinformatics_2013

description: These are companion figures to the paper Luis Pedro Coelho, Joshua D. Kangas, Armaghan Naik, Elvira Osuna-Highley, Estelle Glory-Afshar, Margaret Fuhrman, Ramanuja Simha, Peter B. Berget, Jonathan W. Jarvik, and Robert F. Murphy, Determining the subcellular location of new proteins from microscope images using local features in Bioinformatics, 2013
DOI: 10.6084/m9.figshare.743695.v2
title: US_NOAA_GSOD_SAMPLE

description: Sample of Stations in the US recording surface metrics in collaboration with NOAA
DOI: 10.6084/m9.figshare.743001.v1
title: Gaussian Job Archive for I8

description: Archive of work produced using the resources of the Imperial College High Performance Computing Service.