cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21233/cha3-rn73
title: Basin diatom surface sample dataset

description: Raw data for the Basin diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/76tw-pm63
title: LDDsite2972 water chemistry dataset

description: Raw data for the LDDsite2972 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/53ep-tp39
title: Iztapa charcoal dataset

description: Raw data for the Iztapa charcoal dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5284/1129483
title: Report and Images from a Level 2 Historic Building Recording Work of Lion Head Mooring Rings at Victoria Embankment, Westminster, Greater London, March 2019

description: This collection consists of a report and images from a level 2 historic building recording works relating to 46 lion head mooring rings at Victoria Embankment, Westminster, Greater London, undertaken by WSP in March 2019.
DOI: 10.21233/6m8d-f249
title: ROF-F02 charcoal dataset

description: Raw data for the ROF-F02 charcoal dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/8jnr-6q12
title: MonteVerde21 pollen surface sample dataset

description: Raw data for the MonteVerde21 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.snnh67
title: Occurrence Download

description: A dataset containing 76089 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Asclepias syriaca L.",
 "Year 2019-2024"
 ]
}

 The dataset includes 76089 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023449-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/5pvq-4378
title: Glacier Creek [LaVo-VP] vertebrate fauna dataset

description: Raw data for the Glacier Creek [LaVo-VP] vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.7910/dvn/yhvwxy
title: Ebola Virus Optical Pooled Screen | Genome-wide Screen Images

description: &lt;!DOCTYPE html&gt;
&lt;html lang="en"&gt;
&lt;head&gt;
&lt;meta charset="utf-8"&gt;
&lt;/head&gt;
&lt;body&gt;

&lt;h2&gt;Overview&lt;/h2&gt;
&lt;p&gt;This archive contains a &lt;strong&gt;~10 % curated subset&lt;/strong&gt; of genome‑wide phenotyping images. Images are from plate GWA (wells A1, A2, A3, B1, B2) in HeLa cells with a genome-wide CRISPR knockout library (~20,0000 genes, 4 sgRNAs/gene). Data are read out by optical pooled screening.&lt;/p&gt;

&lt;h2&gt;Image Locations&lt;/h2&gt;
&lt;ul&gt;
 &lt;li&gt;&lt;strong&gt;Genome‑wide phenotyping:&lt;/strong&gt;
 &lt;pre&gt;&lt;code&gt;gs://opspublic-east1/EBOVOpticalPooledScreen/Images/GW[A-I]&lt;/code&gt;&lt;/pre&gt;
 (Each letter represents a distinct 6‑well plate; plate I has wells A1/A2 only.)
 &lt;/li&gt;
 &lt;li&gt;&lt;strong&gt;Metadata:&lt;/strong&gt;
 &lt;pre&gt;&lt;code&gt;gs://opspublic-east1/EBOVOpticalPooledScreen/Metadata/Genomewide&lt;/code&gt;&lt;/pre&gt;
 &lt;/li&gt;
 &lt;li&gt;&lt;strong&gt;Secondary screen (for reference):&lt;/strong&gt;
 &lt;pre&gt;&lt;code&gt;gs://opspublic-east1/EBOVOpticalPooledScreen/Images/SEC_[Early,Late]&lt;/code&gt;&lt;/pre&gt;
 Metadata: &lt;code&gt;.../Metadata/Secondary&lt;/code&gt;
 &lt;/li&gt;
&lt;/ul&gt;

&lt;h2&gt;Phenotyping Channels (Genome‑Wide)&lt;/h2&gt;
&lt;ul&gt;
 &lt;li&gt;&lt;strong&gt;Channel 1:&lt;/strong&gt; DAPI (nuclei)&lt;/li&gt;
 &lt;li&gt;&lt;strong&gt;Channel 2:&lt;/strong&gt; Ebola VP35 RNA FISH (positive‑sense)&lt;/li&gt;
 &lt;li&gt;&lt;strong&gt;Channel 3:&lt;/strong&gt; Ebola VP35 protein&lt;/li&gt;
 &lt;li&gt;&lt;strong&gt;Channel 4:&lt;/strong&gt; c‑Jun&lt;/li&gt;
 &lt;li&gt;&lt;strong&gt;Channel 5:&lt;/strong&gt; Vimentin&lt;/li&gt;
 &lt;li&gt;&lt;strong&gt;Channel 6:&lt;/strong&gt; LAMP1&lt;/li&gt;
&lt;/ul&gt;


&lt;h2&gt;Manuscript Context&lt;/h2&gt;
&lt;p&gt;Filoviruses such as &lt;strong&gt;Ebola virus (EBOV)&lt;/strong&gt; cause recurrent outbreaks with high mortality, yet therapeutic options remain scarce. Using an image‑based, genome‑wide CRISPR knockout screen spanning 39 million cells, we identified 998 host genes that modulate distinct stages of the EBOV life‑cycle.&lt;/p&gt;

&lt;p&gt;&lt;strong&gt;Key validated hits&lt;/strong&gt;&lt;/p&gt;
&lt;ul&gt;
 &lt;li&gt;&lt;strong&gt;UQCRB&lt;/strong&gt; – Post‑entry regulator of viral RNA synthesis; small‑molecule inhibition lowers EBOV titres in vitro.&lt;/li&gt;
 &lt;li&gt;&lt;strong&gt;STRAP&lt;/strong&gt; – Spliceosome‑associated factor whose disruption skews the viral RNA‑to‑protein ratio; interacts with viral co‑factor VP35.&lt;/li&gt;
&lt;/ul&gt;

&lt;p&gt;The primary screen plus 12 targeted secondary screens (including Sudan and Marburg virus assays) provide a rich resource for host dependencies and potential antiviral targets.&lt;/p&gt;
&lt;/body&gt;
&lt;/html&gt;
DOI: 10.15468/dl.y9b2h3
title: Occurrence Download

description: A dataset containing 399 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Nicaragua, Mexico, Guatemala, Belize, Honduras, El Salvador, Costa Rica, Panama)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Coulteria velutina (Britton & Rose) Sotuyo & G.P.Lewis"
 ]
}

 The dataset includes 399 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023453-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/pahb-7066
title: Blackwood Sinkhole physical sedimentology dataset

description: Raw data for the Blackwood Sinkhole physical sedimentology dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/hx1g-yh29
title: Jake Lake testate amoebae surface sample dataset

description: Raw data for the Jake Lake testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.15374632
title: Raw Data and Analysis Code for "Lewy Body Dementia Promotion by Air Pollutants"
DOI: 10.5281/zenodo.15374633
title: Raw Data and Analysis Code for "Lewy Body Dementia Promotion by Air Pollutants"
DOI: 10.21233/weez-t818
title: LDDsite5610 water chemistry dataset

description: Raw data for the LDDsite5610 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/fw4s-2605
title: Dura-Moor pollen dataset

description: Raw data for the Dura-Moor pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/4qhr-sn95
title: Smith Crossing Pond pollen surface sample dataset

description: Raw data for the Smith Crossing Pond pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.f45hsf
title: Occurrence Download

description: A dataset containing 103 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 {
 "or" : [
 "Geometry POLYGON((-48.44619 -1.48958,-48.47329 -1.48729,-48.50101 -1.49489,-48.48204 -1.51511,-48.45974 -1.52137,-48.42983 -1.50552,-48.44619 -1.48958))",
 "Geometry POLYGON((-48.48745 -1.28861,-48.46806 -1.28704,-48.4604 -1.27746,-48.447 -1.27514,-48.43223 -1.28389,-48.42101 -1.2709,-48.42785 -1.25831,-48.42553 -1.25312,-48.41445 -1.24723,-48.40802 -1.23369,-48.42978 -1.20663,-48.45002 -1.21606,-48.46712 -1.24766,-48.49206 -1.26754,-48.48745 -1.28861))",
 "Geometry POLYGON((-48.34727 -1.05009,-48.48134 -1.08066,-48.48216 -1.19354,-48.42551 -1.20291,-48.40791 -1.22425,-48.39243 -1.22343,-48.38143 -1.21814,-48.36961 -1.22017,-48.36635 -1.22751,-48.35331 -1.2214,-48.35127 -1.21447,-48.34475 -1.20917,-48.34149 -1.20184,-48.304 -1.16027,-48.29504 -1.1346,-48.30074 -1.10526,-48.32519 -1.06949,-48.34727 -1.05009))",
 "Geometry POLYGON((-48.52405 -1.19949,-48.57173 -1.22271,-48.56521 -1.28099,-48.54484 -1.26183,-48.50653 -1.21579,-48.52405 -1.19949))"
 ]
 },
 "OccurrenceStatus is Present",
 "TaxonKey is Liliopsida"
 ]
}

 The dataset includes 103 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023454-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.u2ga6k
title: Occurrence Download

description: A dataset containing 44396 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Cochlospermaceae"
 ]
}

 The dataset includes 44396 records from 664 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023452-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/6vfs-qt39
title: LDDsite5649 water chemistry dataset

description: Raw data for the LDDsite5649 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.15374825
title: TABLE 1 in Mykescola gen. nov., a new genus for two coral-dwelling gall crab species (Decapoda: Cryptochiridae) inhabiting Fungiidae Dana, 1846 corals

description: TABLE 1. Overview of the main carapace differences separating Fungicola Serène, 1968, and Mykescola gen. nov.
Fungicola Serène, 1968Mykescola gen. nov.carapace rectangularcarapace subrectangular, rounded anteriorlycarapace surface uneven, covered with small, low granules on posterior half, larger and rather spiniform on anterior halfcarapace surface smooth, covered with fine granulesinternal orbital angles nearly reaching level of external orbital angleinternal orbital angle falling much shorter than external orbital anglefront moderately concave, armed with spines of different sizefront moderately concave, with small granulesantero-lateral borders armed with spinesantero-lateral borders with spinulesbranchial regions hardly separated from mid-gastric, cardio-intestinal regions by very shallow furrowsbranchial regions separated from mid-gastric and cardio-intestinal regions by shallow furrowscarapace with striking brown, white patterns (visible in ethanol), pereiopods bandedcarapace a dull beige-grey, sometimes with horseshoe shaped white/greenish pattern, pereiopods semi-translucent
description: Published as part of Van Der Meij, Sancia E. T., 2025, Mykescola gen. nov., a new genus for two coral-dwelling gall crab species (Decapoda: Cryptochiridae) inhabiting Fungiidae Dana, 1846 corals, pp. 596 in Zootaxa 5631 (3) on page 596, DOI: 10.11646/zootaxa.5631.3.12, http://zenodo.org/record/15370809
DOI: 10.21233/n9xf-9080
title: Ouinet Ennessours pollen dataset

description: Raw data for the Ouinet Ennessours pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/jjb2-5n94
title: Big Island Lake ostracode surface sample dataset

description: Raw data for the Big Island Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/pwwe-rc25
title: Deputy Cave vertebrate fauna dataset

description: Raw data for the Deputy Cave vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.15468/dl.5crumj
title: Occurrence Download

description: A dataset containing 167508 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Month is one of (January, February, March, April)",
 "OccurrenceStatus is Present",
 "TaxonKey is Mollusca",
 "Year is 2025"
 ]
}

 The dataset includes 167508 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023437-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z22aqp
title: Occurrence Download

description: A dataset containing 1180 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Hypericum prolificum L.",
 "Year 2019-2024"
 ]
}

 The dataset includes 1180 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023455-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v8mazy
title: Occurrence Download

description: A dataset containing 2237 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Mexico, Costa Rica, Belize, Guatemala, El Salvador, Honduras, Nicaragua, Panama)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Swietenia macrophylla G.King"
 ]
}

 The dataset includes 2237 records from 70 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023456-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/4h52-8m98
title: Mount Halla, 1100 M Highland Marsh ostracode surface sample dataset

description: Raw data for the Mount Halla, 1100 M Highland Marsh ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.13887712
title: Data from: Area of habitat maps and validated occurrences for neotropical birds of conservation concern

description: Understanding species distributions is essential for advancing bird conservation, especially in the rapidly changing landscapes of the Neotropics, where habitat loss and degradation are accelerating. Area of Habitat (AOH) maps offer valuable spatial tools for illustrating species distributions by highlighting potentially suitable habitats within their geographic range. In this study, we generated AOH maps for 713 neotropical bird species of conservation concern, which includes species listed as globally or nationally threatened, endemic, or with restricted ranges. Using primary biodiversity data and a structured geospatial workflow, we refined approximately 2.5 million occurrence records through a flagging process and validated 50,743 records manually. This unparalleled effort led to the creation of high-quality AOH maps, along with altitude-corrected Extent of Occurrence (EOO-DEM) and Inverse Distance Weighted (IDW) range maps.  Our AOH maps significantly improved species distribution predictions for 82% of species, over EOO-DEM maps. The validated occurrences and AOH maps produced in this study have wide-ranging applications, providing a valuable basis for the development of new species distribution models and for evaluating species’ natural history, extinction risk, and habitat threats. They also support the identification of priority areas for strategic conservation investments. Importantly, these maps played a key role in systematic conservation planning analyses for the Conserva Aves initiative, which is facilitating the creation of more than 80 new protected areas across Latin America, safeguarding 2 million hectares and improving the management of an additional 2 million hectares (https://conserva-aves.org/).
DOI: 10.5281/zenodo.13887713
title: Data from: Area of habitat maps and validated occurrences for neotropical birds of conservation concern

description: Understanding species distributions is essential for advancing bird conservation, especially in the rapidly changing landscapes of the Neotropics, where habitat loss and degradation are accelerating. Area of Habitat (AOH) maps offer valuable spatial tools for illustrating species distributions by highlighting potentially suitable habitats within their geographic range. In this study, we generated AOH maps for 713 neotropical bird species of conservation concern, which includes species listed as globally or nationally threatened, endemic, or with restricted ranges. Using primary biodiversity data and a structured geospatial workflow, we refined approximately 2.5 million occurrence records through a flagging process and validated 53,362 records manually. This comprehensive effort resulted in high-precision AOH maps, with altitude-adjusted Extent of Occurrence (EOO-DEM) and Inverse Distance Weighting (IDW) models performing better than random expectations for 99.14% and 95.28% of the species, respectively. The validated occurrences and AOH maps produced in this study have wide-ranging applications, providing a valuable basis for the development of new species distribution models and for evaluating species’ natural history, extinction risk, and habitat threats. They also support the identification of priority areas for strategic conservation investments. Importantly, these maps played a key role in systematic conservation planning analyses for the Conserva Aves initiative, which is facilitating the creation of more than 80 new protected areas across Latin America, safeguarding 2 million hectares and improving the management of an additional 2 million hectares (https://conservaves.redlac.org/(opens in new window)).
DOI: 10.5281/zenodo.13919938
title: Data from: Area of habitat maps and validated occurrences for neotropical birds of conservation concern

description: Understanding species distributions is essential for advancing bird conservation, especially in the rapidly changing landscapes of the Neotropics, where habitat loss and degradation are accelerating. Area of Habitat (AOH) maps offer valuable spatial tools for illustrating species distributions by highlighting potentially suitable habitats within their geographic range. In this study, we generated AOH maps for 713 neotropical bird species of conservation concern, which includes species listed as globally or nationally threatened, endemic, or with restricted ranges. Using primary biodiversity data and a structured geospatial workflow, we refined approximately 2.5 million occurrence records through a flagging process and validated 53,362 records manually. This comprehensive effort resulted in high-precision AOH maps, with altitude-adjusted Extent of Occurrence (EOO-DEM) and Inverse Distance Weighting (IDW) models performing better than random expectations for 99.14% and 95.28% of the species, respectively. The validated occurrences and AOH maps produced in this study have wide-ranging applications, providing a valuable basis for the development of new species distribution models and for evaluating species’ natural history, extinction risk, and habitat threats. They also support the identification of priority areas for strategic conservation investments. Importantly, these maps played a key role in systematic conservation planning analyses for the Conserva Aves initiative, which is facilitating the creation of more than 80 new protected areas across Latin America, safeguarding 2 million hectares and improving the management of an additional 2 million hectares (https://conservaves.redlac.org/(opens in new window)).