cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/bckfv3wtcr
title: Everyday working memory and social environment

description: Data collected prior to COVID19 from an opportunity sample. All measures included are self report. This study was designed to consider the factors which predict everyday memory errors. The variables included were social anhedonia, loneliness, negative affect and everyday memory errors. There are also detailed demographic questions to characterise the social environment in which participants exist. 

The file contains data from 271 participants. Data was collected while at University of Wollongong, NSW. 

#NULL refers to cells which are empty.

Measures used: 
UCLA Loneliness Scale (UCLA; (Russell, 1996)) 
Depression, Anxiety and Stress Scale (DASS (Henry & Crawford, 2005)) 
Everyday Memory Questionnaire (Calabria et al., 2011)
DOI: 10.17632/chm9f2c588
title: Mobilefuge: A low-cost, portable, open source, 3D-printed centrifuge that can be used for purification of saliva samples to detect SARS-CoV2

description: One of the best ways to contain the spread of COVID-19 is frequent testing of as many people as possible and timely isolation of uninfected personnel from infected personnel. However, the cost of massive testing is not affordable in many countries. The existing technologies might not be scalable to offer affordable and timely testing for millions of people. To address this issue, novel testing methods based on Loop-Mediated Isothermal Amplification (LAMP) were proposed that are more sensitive, require less reagents and can work with saliva samples instead of more tedious nasal swabs. As a result, LAMP based protocols can make it possible to drive the cost down to one dollar per test. These LAMP based methods require a centrifuge device, mostly for separation of viral particles from reaction inhibitors in saliva samples. However, centrifuge is neither accessible nor affordable in many resource limited settings, especially during this pandemic situation when normal supply chains are heavily disrupted. To overcome these challenges, we invented a low-cost centrifuge that can be useful for carrying out low-cost LAMP based detection of SARS-Cov2 virus in saliva. The 3D printed centrifuge (Mobilefuge) is portable, robust, stable, safe, easy to build and operate. The Mobilefuge doesn't require soldering or programming skills and can be built without any specialised equipment, yet practical enough for high throughput use. More importantly, Mobilefuge can be powered from widely available USB ports, including mobile phones and associated power supplies. This allows the Mobilefuge to be used even in off-grid and resource limited settings. We believe that our invention will aid the efforts to contain the spread of COVID-19 by lowering the costs of testing equipment. Apart from the COVID-19 testing, the Mobilefuge can have applications in the field of biomedical research and diagnostics.
DOI: 10.17632/cwrcvkm8tt
title: Data on plant legacy effects on total and active microbial successions

description: Plants shape soil microbial communities through their root architecture, their rhizodeposits and return of dead plant material to the soil. These interactions can have a strong influence on the soil organic carbon dynamics. However, it is unclear whether the plant species effects on the soil microbial community could influence the organic carbon mineralization through plant legacy effects. We conducted an experiment with two phases, the first phase corresponded to the “plant-soil experiment” and the second phase referred to the “litter-carbon mineralization experiment”. In the present work, we aimed at providing a dataset outlining the changes induced by the growth of two phylogenetically distinct plants, a common plant model (Arabidopsis thaliana (Linnaeus, 1753) Heynhold, 1842) and a crop (Triticum aestivum (Linnaeus, 1753) on active and total bacterial and fungal community composition. Three planters (bare soil, A. thaliana and T. aestivum) were placed in an environmental growth chamber during 63 days (plant-soil experiment). To identify early plant legacy effects on soil microbiota, both DNA (total microbial community) and RNA (active microbial community) were used to quantify microbial abundances (quantitative PCR) and identify the changes in microbial diversity using a 16S rRNA gene and ITS amplicon sequencing approach (Illumina). Here, we provided a dataset with the bacterial and fungal OTUs abundances (expressed in copy number of gene) and  the chemical composition of the different soils.
DOI: 10.17632/fp97vcw9xg
title: Data for: Joint optimization of container slot planning and truck scheduling for tandem quay cranes

description: Supplementary Raw Research Data
DOI: 10.17632/g2s3z96s85
title: LINF_360036700

description: 40S ribosomal protein S24e | eS24 Leishmania infantum (strain JPCM5)
DOI: 10.17632/hgb4wrddt6
title: The Diet of Early Birds Based on Modern and Fossil Evidence and a New Framework for its Reconstruction

description: Excel spreadsheet and R code used to make all supplemental graphs for the review paper, as well as spreadsheet and calculations for mass values in Table 2.
DOI: 10.17632/jjjk47ccg5
title: mtDNA mutations

description: The dataset includes the breakpoint positions of mitochondrial DNA deletions that have been curated from the literature and from our own experiments (Caenorhabditis elegans). The data were used to analyze the thermodynamic property of the sequences around the breakpoints to test hypotheses on the DNA misalignments during double-strand break repairs driving mtDNA deletions.
DOI: 10.17632/kp5jcm8469
title: Too far to go to work?

description: Data supporting paper "Too far to go to work? Examining the effect of changes in the time taken to commute on regional unemployment"
DOI: 10.17632/365bfpzs4w
title: Predicted no-effect concentration of Roundup in the composition with pharmaceutical chlorpromazine or heating causes similar biochemical disturbances in bivalve mollusk Unio tumidus

description: Despite the importance of zinc (Zn) in the suppressing of inflammation, the Zn functionality in the knee joint under the gonarthritis (GA) is not elucidated. The aim of this study was to investigate the participation of Zn- buffering and stress responsive proteins metallothioneins (MTs) in the pathogenesis of the synovial tissues under the experimental acute GA. The inflammation was induced in rats by intra-articular administration of carrageenan. The concentrations of MTs total protein (MTSH), Zn-bound protein (Zn-MTs), total Zn concentration in the tissue, the indexes of oxidative stress and cholinesterase activity were determined. The level of sialic acids was indicated in the blood serum. The enhancing of sialic acids concentration by 42% and cholinesterase depletion confirmed the inflammation. In the animals with GA, total level of Zn in the tissue was correspondent to control. However, the MTSH and Zn-MT levels were elevated (by 79 and 46% respectively). This disproportionate rate can be due to partial oxidation of thiols. The superoxide dismutase activity was elevated, radical scavenging activity and protein carbonylation were correspondent to control, but the levels of catalase, glutathione–S-transferase and glutathione were decreased by 28-44%, and lipid peroxidation (TBARS) was increased by 59% compared to control group. Principal Component Analysis confirmed the strong interrelations between MTs and oxidative stress indexes. This preliminary study provides the basis for the understanding of the reason for Zn imbalance in the acute GA as the result of the impairment of thiol redox balance and proposes these biomarkers for the evaluation of knee joint pathologies.
DOI: 10.17632/5r59nc9jkt
title: ovarian thecoma-fibroma

description:  We collected 40 patients with surgically proven thecoma-fibroma  in this  study.
DOI: 10.17632/pzf9jkpkvb
title: Materials for: Find someone with similar values but different personalities 

description: Materials for: Find someone with similar values but different personalities
DOI: 10.17632/t9ss34h3w8
title: LINF_260025000

description: Thioredoxin-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/wmjh4vzd7v
title: Mechanical Neck Pain: A comparison of Yoga and Physiotherapy on Pain & Disability and Pressure Pain Threshold

description: 120 patients with subacute bilateral mechanical neck pain were selected according to the inclusion criteria. Patients was randomized to the 4 groups: PNF Group, Yoga group, combined group and control group. 
120 sample of bilateral sub-acute mechanical neck pain cases were selected with criteria based consecutive randomization. Sample size was calculated using Cochran’s formula with 95% confidence level (alpha=0.05). This study was registered with Clinical Trial Registry of India (CTRI) with registration number CTRI/2019/01/016985. The study was approved by Institutional Ethics Committee (IEC) of Amity University Uttar Pradesh, Noida. The inclusion criteria for this study were patients with bilateral subacute mechanical neck pain duration (6 weeks-12 weeks), aged 18-30 years, Neck Disability Index (NDI)&lt;40%, both males and females, and subjects those who have dull aching pain increased by sustained neck postures (10). The exclusion criteria included subjects with diagnosed spinal deformities, cervical spondylitis with radiculopathy, neoplasm or inflammatory disease of neck, history of cervical osteoporosis, fracture, whiplash injury, low back pain, cervicogenic headache, or cervical surgery.

Outcome measures with the parameters used were Neck Pain and Disability, Pressure Pain Thresholds (PPT). The results indicates that neck pain and disability, pressure pain threshold for rhomboids and sternocleidomastoid improves significantly within groups for all the four groups comparing from baseline to 4-week post intervention and baseline to last follow up and 4-week intervention to last post intervention 2 week follow up (p&lt;0.05). Between group analysis showed that group 3 (combined Ardhmatsyendrasana with PNF and OM chanting) showed significant improvement (p&lt;0.05) in neck pain and its related disability, pressure pain threshold for cervical muscles for patients suffering from bilateral subacute mechanical neck pain even two weeks after the treatment ceases.
DOI: 10.17632/5jvj9g88ty
title: LINF_060015300

description: cell cycle associated protein MOB1; Leishmania infantum
DOI: 10.17632/7zv76vrd55
title: LINF_100008500

description: protein transport protein SEC23; Leishmania infantum
DOI: 10.17632/923hgnm8y4
title: Data for: Lithogeochemical and Nd isotopic constraints on felsic magmatism in Makkovik Orogen, Labrador, Canada: implications for assembly of supercontinent Nuna

description: Major and trace element lithogeochemistry for the felsic volcanic and associated hypabyssal magmatism.
DOI: 10.17632/h6gtvt32hd
title: Data for: Multi-stage Holocene evolution of the River Murray Estuary, South Australia

description: This dataset contains core logs, magnetic susceptibility, and scanning-XRF data (1 mm resolution; 24 elements) for 9 sediment cores sampled from Lake Albert, South Australia (-35.6, 139.3); one of the two 'Lower Lakes' that constitute the River Murray Estuary. Age-depth modelling results (BACON), laser diffraction grain-size data (1 cm resolution; Malvern Mastersizer 2000), and loss-on-ignition data (2 cm resolution) for one of the sediment cores are also included. This dataset accompanies the paper 'Multi-stage Holocene evolution of the River Murray Estuary, South Australia'.
DOI: 10.17632/r726tw3drc
title: Exploring Consumer Food Values in Light of Japanese and Western Food Cultures: A Case Study in Shanghai (China)

description: data/code for the paper, Exploring Consumer Food Values in Light of Japanese and Western Food Cultures: A Case Study in Shanghai (China)
DOI: 10.17632/ss3ykgwtxg
title: raw data-smy

description: Raw data from general test, EEM and FT-ICR MS.
DOI: 10.17632/zk66fg9ktn
title: End-User discussions about Google Maps apps on the Reddit Forum: A Crowd Requirements Dataset

description: It comprises end-user discussions on topics related to the Google Maps application on the Reddit Forum.
A small dataset comprising user discussion about Google Maps application used for validating argumentation-based research approaches. 
A Python script for extracting end-user feedback from the Reddit forum by keeping the argumentative order of discussions (comment-reply).
DOI: 10.17632/9sspy7hdpc
title: LDHU3_12.1650

description: PRMT1 | Arginine N-methyltransferase (type I); Leishmania donovani (HU3 strain)
DOI: 10.17632/g8f2sdyws2
title: Kirby et al. LCGA-17 Data

description: Results of Crawley's three-chamber test and hole board test for chronically-dosed Dom and Sub strain mice with experimental peptide LCGA-17 (i.n.). The Dom and Sub strains were selectively-bred over 43 generations from the Sabra-M strain following subject segregation based on results of a modified tube test (dominant-submissive relationship test) with fixed pairs of mice in a food competition paradigm tested daily over 14 days prior to breeding. LCGA-17 is a putative anxiolytic agent that in chronic low dose administration shows decreased anxiety-like effects and increased sociability in the stress-resilient Dom strain (three-chamber test) and differential effects between the strains in the hole board test (dose-dependent increase in novel curiosity and exploratory behavior [Dom strain]; increases in these behaviors at the highest dose tested [1.0 mg/kg, i.n.] in the Sub strain).
DOI: 10.17632/h8rmg56d28
title: 23-02492-RNAseq-NSA 2.5 uM

description: Centriolar satellites are high-order assemblies, scaffolded by the protein PCM1, that gravitate as particles around the centrosome and play pivotal roles in fundamental cellular processes notably ciliogenesis and autophagy. Despite stringent control mechanisms involving phosphorylation and ubiquitination, the landscape of post-translational modifications shaping these structures remains elusive. Here, we report that necrosulfonamide (NSA), a small molecule known for binding and inactivating the pivotal effector of cell death by necroptosis MLKL, intersects with centriolar satellites, ciliogenesis, and autophagy independently of MLKL. NSA functions as a potent redox cycler and triggers the oxidation and aggregation of PCM1 alongside select partners, while minimally impacting the overall distribution of centriolar satellites. Additionally, NSA-mediated ROS production disrupts ciliogenesis and leads to the accumulation of autophagy markers, partially alleviated by PCM1 deletion. Together, these results identify PCM1 as a redox sensor protein and provide new insights into the interplay between centriolar satellites and autophagy.
DOI: 10.17632/h9wfssy253
title: "Yeast Heterochromatin Only Stably Silences Weak Regulatory Elements by Altering Burst Duration" raw wide-field microscopy images for variable core promoter experiments

description: Raw wide-field microscopy images of strains with PP7-PHO5 at HMR driven by the TDH3 enhancer and one of either the MATa1, PGK1, RPL28, or TDH3 core promoters, used for measuring the frequency of synthesis of fluorescent mRNA foci.

Details:
7368: TDH3e/TDH3p
8072: TDH3e/MATa1p
8074: TDH3e/PGK1p
8076: TDH3e/RPL28p
DOI: 10.17632/hd5j6p8kmm
title: Towards the saving of global rainforests: Oceania tropical rainforest terrestrial pollen records

description: The pollen records here were used to compute rates of change for Oceania tropical rainforest vegetation in Adeleye et al. (2022)-Towards the saving of global rainforests, and only include terrestrial pollen taxa. The article associated with this data is:
Adeleye MA, Connor SE, Herbert A and Haberle SG (2022). Towards the saving of global rainforests. Global Change Biology
DOI: 10.17632/njkv4k5s34
title: N_kmatch_birthday_problem

description: This is the simulated data. It provides the values of  minimum number trials required to get exactly k matched tuple of birthdays in birthday problem. This file provides 100000 simulated observations for  k=2,3,...10.
DOI: 10.17632/nrxmxh2j9m
title: Figure6H GBO #7 _PDZi1

description: Figure6H GBO #7 _PDZi1
DOI: 10.17632/s22xpssf7v
title: LINF_230023600

description: Palmitoyltransferase; Leishmania infantum (strain JPCM5)
DOI: 10.17632/s95m953h4g
title: Elemental geochemistry data from sediments in the Otway Basin, South Australia

description: Cuttings samples from petroleum wells Sawpit 1, Sawpit 2, Katnook 4, Wynn 1, Bungaloo 1 and Jolly 1ST1 were selected for whole rock elemental geochemistry using both lab-based and Portable (pXRF) Xray Fluorescence methods.  This data formed the basis of a major chemostratigraphic study used to characterise and differentiate sediments of the Early Cretaceous Crayfish Group in the Otway Basin as part a series of studies associated with the SA Department for Energy and Mining's Otway Basin 3D Basin Model and Petroleum Systems Analysis Project.
DOI: 10.17632/yn44435t96
title: COVID-19 inpatient care performance in the Unified Health System, São Paulo state, Brazil

description: The data were analyzed and presented in the paper "COVID-19 inpatient care performance in the Unified Health System, São Paulo state, Brazil: an application of hospital standardized mortality rates for comparisons inter and within hospitals over time". The data were obtained from publicly available administrative databases provided by the Ministry of Health and the CIDACS/Fiocruz. The main data source in the study was the Hospital Information System (SIH), which contains information on hospitalizations reimbursed by the SUS. The SIH data were accessed through the website https://datasus.saude.gov.br/transferencia-de-arquivos/. The data were obtained in July 2022. The Brazilian Deprivation Index (BrazilDep) data were obtained from CIDACS/Fiocruz (https://cidacs.bahia.fiocruz.br/ibp/base-de-dados-do-ibp-municipal-esta-disponivel-para-download/). Data from the National Register of Health Establishments (CNES), which provides comprehensive information on health facilities, were extracted from the DATASUS website (https://datasus.saude.gov.br/transferencia-de-arquivos/). Databases were built for each period of the study (February to August/2020 - Banco_Covid_SP1; September to November/2020 - Banco_Covid_SP2; December/2020 to June/2021 - Banco_Covid_SP3; July to November/2021 - Banco_Covid_SP4; December/2021 to February/2022 - Banco _Covid_SP5).
DOI: 10.17632/85by867t3j
title: Yeast SAFE Analysis  

description: SAFE (Spatial Analysis of Functional Enrichment), is a systematic methodology for biological network annotation and their functional organization. The SAFE method relies on three major steps: first, attain a network map containing all of its nodes and connections; second, collect multiple independent datasets that characterize all nodes relative to one another based on parameters such as cellular localization, mutant phenotype, transcriptional response; and third, perform automated statistics to identify regions with functional relevance through the overlay of functional data and the network map .

For target pathway identification by HOP, we extracted the top the top 10 genes involved in both  positive and negative genetic interactions for each single-deletion mutant hit. The lists of genetic interactions were generated through a yeast global genetic interaction network platform (thecellmap.com), by the selection of the top 10 genetic interactions with a P value < 0.005. Final lists were then analyzed in the same platform by Spacial Analysis of Function Enrichement (SAFE), to find regions of the global similarity network that are significantly enriched for genes that interact with HOP hits, using a stringent cutoff for both genetic interactions.

The files contain the SAFE analysis provided by the genetic interaction network platform (thecellmap.com), used to predict the targeted pathways affected by 0CK and 542 compounds.
DOI: 10.17632/c9p5wttk22
title: High Temperature XRD results for Sn-Ag solder alloy

description: In situ High Temperature XRD results for Sn-Ag solder alloy
DOI: 10.17632/fxv5dnyzzc
title: The Romance of Leadership: Rekindling the fire through replication of Meindl and Ehrlich. Leadership Quarterly  (Study1 /2 /3 /4)

description: Reference for full paper:

Hammond, M., Schyns, B. Vogelgesang, G., Thomas, J. S. & Clapp-Smith, R (accepted). The Romance of Leadership: Rekindling the fire through replication of Meindl and Ehrlich. Leadership Quarterly (Special Issue on Replication and Rigorous Retesting of Leadership Studies.)

Replication of Meindl & Ehrlich (1987) study 1 (close replication, using MBA students from US universities)

Replication Hypothesis 1: Individuals presented with leadership-attributed causal accounts will evaluate firm performance more favorably in terms of a) profitability, b) risk, c) overall performance, and d) positivity than when the same performance outcomes are attributed to non-leadership factors.

Hypothesis 2a: In success conditions, firm performance evaluations will be rated more positively in the male leader-conditions than female leader- conditions, and both of which are more positive than market conditions. 
Hypothesis 2b: In failure conditions, firm performance evaluations will be rated more negatively for the female leader-conditions than male leader-conditions, both of which are more negative than market conditions.

Hypothesis 3a: In success conditions, firm performance evaluations and behavioral intentions will be rated more positively in the male leader-conditions than female leader- conditions, and both of which are more positive than market conditions. 
Hypothesis 3b: In failure conditions, firm performance evaluations and behavioral intentions will be rated more negatively for the female leader-conditions than male leader-conditions, both of which are more negative than market conditions.
DOI: 10.17632/hmkvmsxrmb
title: A microbial derived bile acid acts as GPBAR1 agonist and RORγt inverse agonist and reverses inflammation in inflammatory bowel disease - Bile acids quantification through UHPLC-MRM-MS section

description: The interplay between the gut microbiota, bile acids and the immune is a critical determinant in development of inflammatory bowel disease (IBD). Here we investigated the fecal bile acid profiles in murine models of colitis, through UHPLC-MRM-MS.
DOI: 10.17632/ry9fydgc3z
title: Understanding teacher agency through narratives while looking from the lens of Bourdieusian concepts

description: incidents in particular, influence the manifestation of teacher agency in the context of private schools in Lebanon. This conceptualization was formed by looking through the lens of Bourdieusian concepts, particularly the habitus and field. The study followed a narrative analysis approach in understanding the information shared by 5 private school teachers through semi-structured interviews. The data was then shared through creating three personas where their stories were narrated in line of the Labovian approach to narratives. Each story shared a different outcome with regards to how a past experiences affect participants’ current practice in the school. The study found a connection between critical incidents and the manifestation of teacher agency in Lebanese private school structures which is further described below. The research paper concludes with offering recommendations with regards to how the findings can be utilized in terms of practice and future research.
DOI: 10.17632/75ddbmsmyg
title: JDS miRNA supplemental File 3

description: List of 46 circulating known mature miRNAs with differential abundance between Healthy and Persistent subclinical endometritis cows.
DOI: 10.17632/gkbnpyp8b9
title: Digital transformation and enterprise innovation: A mechanistic examination based on the R&D investment leap

description: Contains all the data used in the empirical analysis of this paper
DOI: 10.17632/h78smmnbzh
title: Data

description: This data for the paper named "A Comprehensive Efficiency Assessment of Vietnamese Banks: Based on the two-stage SBM-DEA model with undesirable output"