cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14011487
title: Life stage-specific effects of heat stress on spermatogenesis and oogenesis in Drosophila melanogaster

description: #Life stage-specific effects of heat stress on spermatogenesis and oogenesis in Drosophila melanogaster

##Authors

Abhishek Meena, Alessio N. De Nardo, Komal Maggu, Sonja Sbilordo, Benjamin Eggs, Rawaa Al Toma Sho, Stefan Lüpold

## Citation of associated articleMeena, A., Maggu, K., De Nardo, A.N., Sbilordo, S.H., Eggs, B., Al Toma Sho, R., Lüpold, S., 2024. Life stage-specific effects of heat stress on spermatogenesis and oogenesis in Drosophila melanogaster. Journal of Thermal Biology 125, 104001. https://doi.org/10.1016/j.jtherbio.2024.104001

 

##OverviewThis dataset was collected to assess the impact of heat stress across various life stages on reproductive performance in Drosophila melanogaster. The study focuses on stage- and sex-specific reproductive metrics such as: mating success, fertility, fecundity, hatching success, which for females were summed over four days and for males were assayed for four consecutive 24-hour periods, each with a different female. 

The dataset is structured to analyze these outcomes at different temperatures and developmental stages, providing insights into sex- and stage-specific vulnerabilities to heat stress. 

The analyses are performed in an R Markdown (.Rmd) file, using data stored in a CSV file

##Contents

The dataset includes the following files:

Rscript.Rmd: An R Markdown file containing code for analyzing sex- and stage-specific reproductive fitness based on the data in Data.csv.Data.csv: A CSV file with the raw data used for the analysis.

##Data Description

Note: NA's in each data file represent missing data (data not available). 

The Data.csv file contains the following columns:

Unique.ID: Unique identifier for each experimental individual.

SampleID: Identifier for each treatment group.

Temperature: Thermal exposure temperature (measured in degrees Celsius) for 4 hours, with levels: 24.5°C, 28°C, 32°C, 36°C, and 38°C.

Lifestage: Developmental stage during which thermal treatment was applied.

Sex: Sex of the individual exposed to the thermal treatment.

Day: Days post adult treatment exposure.

Block: Experimental block identifier for randomized grouping.

Total: Total number of eggs laid within 24 hours of oviposition.

Hatched: Number of eggs that successfully hatched.

Unhatched: Number of eggs that did not hatch (derived from the difference between Total and Hatched).

##Usage

To analyze the dataset, open and run the respective R Markdown (Rmd) files in RStudio or any compatible R Markdown environment. The Rmd files contain all the necessary code to reproduce the analyses described in the overview.
DOI: 10.5281/zenodo.14011488
title: Life stage-specific effects of heat stress on spermatogenesis and oogenesis in Drosophila melanogaster

description: #Life stage-specific effects of heat stress on spermatogenesis and oogenesis in Drosophila melanogaster

##Authors

Abhishek Meena, Alessio N. De Nardo, Komal Maggu, Sonja Sbilordo, Benjamin Eggs, Rawaa Al Toma Sho, Stefan Lüpold

## Citation of associated articleMeena, A., Maggu, K., De Nardo, A.N., Sbilordo, S.H., Eggs, B., Al Toma Sho, R., Lüpold, S., 2024. Life stage-specific effects of heat stress on spermatogenesis and oogenesis in Drosophila melanogaster. Journal of Thermal Biology 125, 104001. https://doi.org/10.1016/j.jtherbio.2024.104001

 

##OverviewThis dataset was collected to assess the impact of heat stress across various life stages on reproductive performance in Drosophila melanogaster. The study focuses on stage- and sex-specific reproductive metrics such as: mating success, fertility, fecundity, hatching success, which for females were summed over four days and for males were assayed for four consecutive 24-hour periods, each with a different female. 

The dataset is structured to analyze these outcomes at different temperatures and developmental stages, providing insights into sex- and stage-specific vulnerabilities to heat stress. 

The analyses are performed in an R Markdown (.Rmd) file, using data stored in a CSV file

##Contents

The dataset includes the following files:

Rscript.Rmd: An R Markdown file containing code for analyzing sex- and stage-specific reproductive fitness based on the data in Data.csv.Data.csv: A CSV file with the raw data used for the analysis.

##Data Description

Note: NA's in each data file represent missing data (data not available). 

The Data.csv file contains the following columns:

Unique.ID: Unique identifier for each experimental individual.

SampleID: Identifier for each treatment group.

Temperature: Thermal exposure temperature (measured in degrees Celsius) for 4 hours, with levels: 24.5°C, 28°C, 32°C, 36°C, and 38°C.

Lifestage: Developmental stage during which thermal treatment was applied.

Sex: Sex of the individual exposed to the thermal treatment.

Day: Days post adult treatment exposure.

Block: Experimental block identifier for randomized grouping.

Total: Total number of eggs laid within 24 hours of oviposition.

Hatched: Number of eggs that successfully hatched.

Unhatched: Number of eggs that did not hatch (derived from the difference between Total and Hatched).

##Usage

To analyze the dataset, open and run the respective R Markdown (Rmd) files in RStudio or any compatible R Markdown environment. The Rmd files contain all the necessary code to reproduce the analyses described in the overview.
DOI: 10.5519/qd.b7yyxwfm
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (391 records)
DOI: 10.34740/kaggle/ds/5995774
title: Mental state-Academic performance: CS Student Life
DOI: 10.34740/kaggle/dsv/9786422
title: World Stock Prices ( Daily Updating )
DOI: 10.15468/dl.sz58yy
title: Occurrence Download

description: A dataset containing 2753 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Agrilus planipennis Fairmaire, 1888",
 "Country is United States of America",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 2753 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018732-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zh4vyh
title: Occurrence Download

description: A dataset containing 2616 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Occurrence evidence, Living Specimen, Fossil, Specimen, Human Observation, Machine Observation, Observation)",
 "Country is China",
 "TaxonKey is Quercus fabrei Hance"
 ]
}

 The dataset includes 2616 records from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018733-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14027011
title: Applied Geophysics - Magnetic Anomaly Data Mosaic of the Socorro-Guaxupé Geological Area (Brazil)

description: The Socorro-Guaxupé area is a complex structural environment formed during Proterozoic times, associated with the formation of the Gondwana Supercontinent. The notable magnetic signatures of these geological areas were selected for an Applied Geophysical project for undergraduates in the Geology Course at the University of São Paulo in 2024.

This grid mosaic encompasses airborne magnetic data from areas 15, 14, 7, and 2 of the CODEMIG repository (http://www.codemig.com.br/) as well as data from areas 1105, 1117, 1039, 4099, 4112, and 4210 from the Geological Survey of Brazil (SGB-CPRM). The surveys were gridded with cell sizes of 1/4 of the flight line spacing, using the minimum curvature method. Additionally, they were continued to a nominal altitude of 700 m for decreasing noise signal, due to the variable spatial resolution and acquisition techniques. Grid stitching was performed using pairs of grids, with the stitching method implemented in Oasis Montaj software. The locations of all surveys are presented in the figure "socorro-guaxupe_surveys.tif."

We would like to thank the team at the Laboratory for Research in Applied Geophysics (LPGA) and the professors from the Rio de Janeiro State University (UERJ) and GeoAtlantico Institute for their technical support in assembling this data.

This study was financed in part by the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - Brasil (CAPES) - Finance Code 001 (L. Szameitat 88887.798323/2022-00)
DOI: 10.5281/zenodo.14027012
title: Applied Geophysics - Magnetic Anomaly Data Mosaic of the Socorro-Guaxupé Geological Area (Brazil)

description: The Socorro-Guaxupé area is a complex structural environment formed during Proterozoic times, associated with the formation of the Gondwana Supercontinent. The notable magnetic signatures of these geological areas were selected for an Applied Geophysical project for undergraduates in the Geology Course at the University of São Paulo in 2024.

This grid mosaic encompasses airborne magnetic data from areas 15, 14, 7, and 2 of the CODEMIG repository (http://www.codemig.com.br/) as well as data from areas 1105, 1117, 1039, 4099, 4112, and 4210 from the Geological Survey of Brazil (SGB-CPRM). The surveys were gridded with cell sizes of 1/4 of the flight line spacing, using the minimum curvature method. Additionally, they were continued to a nominal altitude of 700 m for decreasing noise signal, due to the variable spatial resolution and acquisition techniques. Grid stitching was performed using pairs of grids, with the stitching method implemented in Oasis Montaj software. The locations of all surveys are presented in the figure "socorro-guaxupe_surveys.tif."

We would like to thank the team at the Laboratory for Research in Applied Geophysics (LPGA) and the professors from the Rio de Janeiro State University (UERJ) and GeoAtlantico Institute for their technical support in assembling this data.

This study was financed in part by the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - Brasil (CAPES) - Finance Code 001 (L. Szameitat 88887.798323/2022-00)
DOI: 10.5281/zenodo.14028251
title: Haan Adler-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.5281/zenodo.14028259
title: Haar-Eglfing Bahnhof-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.15468/dl.27x3va
title: Occurrence Download

description: A dataset containing 3066453120 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 3066453120 records from 68571 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0017014-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r9qwbc
title: Occurrence Download

description: A dataset containing 2055 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "OccurrenceStatus is Present",
 "TaxonKey is Sphagnum girgensohnii Russow"
 ]
}

 The dataset includes 2055 records from 46 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018734-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14028212
title: Haag Grafschafts-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.5281/zenodo.11369960
title: Mitigating Sn Loss via Anion Substitution in the Cu2+-Sn2+ precursor system for Cu2ZnSn(S, Se)4 solar cells
DOI: 10.5281/zenodo.11369961
title: Mitigating Sn Loss via Anion Substitution in the Cu2+-Sn2+ precursor system for Cu2ZnSn(S, Se)4 solar cells
DOI: 10.5281/zenodo.14028277
title: Haaren Industrie-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.6084/m9.figshare.25144328
title: The list of climate policies in China based on a comprehensive policy inventory

description: We identified 22 key climate policies that China has adopted for its carbon neutrality through our policy inventory.
DOI: 10.15468/dl.dtuq7u
title: Occurrence Download

description: A dataset containing 1458 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Centaurea salonitana Vis."
 ]
}

 The dataset includes 1458 records from 87 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018735-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14028287
title: Habelschwerdt Adler-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.6084/m9.figshare.25144304
title: Survey protocol of expert elicitation for China’s policy pathways for carbon neutrality.docx

description: This is our survey protocol of expert elicitation for China’s policy pathways for carbon neutrality. We are using it for expert evaluation of key climate policies in China.
DOI: 10.6084/m9.figshare.25144304.v1
title: Survey protocol of expert elicitation for China’s policy pathways for carbon neutrality.docx

description: This is our survey protocol of expert elicitation for China’s policy pathways for carbon neutrality. We are using it for expert evaluation of key climate policies in China.
DOI: 10.15468/dl.guae4m
title: Occurrence Download

description: A dataset containing 39 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Spain",
 "TaxonKey is Dama dama (Linnaeus, 1758)",
 "Year 1000-1970"
 ]
}

 The dataset includes 39 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018736-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14028295
title: Hachenburg Amts-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.15468/dl.xp2bgm
title: Occurrence Download

description: A dataset containing 1977 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trachypogon spicatus (L.f.) Kuntze",
 "Continent is Africa"
 ]
}

 The dataset includes 1977 records from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018737-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.38wrr3
title: Occurrence Download

description: A dataset containing 2869 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tragus berteronianus Schult.",
 "Continent is Africa"
 ]
}

 The dataset includes 2869 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018738-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r48qz2
title: Occurrence Download

description: A dataset containing 642 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trichanthecium natalense (Hochst.) Zuloaga & Morrone",
 "Continent is Africa"
 ]
}

 The dataset includes 642 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018739-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.4ryrdj
title: Occurrence Download

description: A dataset containing 3587 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alburnus alburnus (Linnaeus, 1758)",
 "Country is Spain",
 "Year is greater than or equal to 1500"
 ]
}

 The dataset includes 3587 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018740-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14028303
title: Hage Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.15468/dl.6eysw6
title: Occurrence Download

description: A dataset containing 1113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Tricholaena monachne (Trin.) Stapf & C.E.Hubb.",
 "Continent is Africa"
 ]
}

 The dataset includes 1113 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018741-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.29zxw6
title: Occurrence Download

description: A dataset containing 441 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trichoneura grandiglumis (Nees) Ekman",
 "Continent is Africa"
 ]
}

 The dataset includes 441 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018742-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.14028305
title: Hagen Adler-Apotheke (ca. 1924/1947)

description: Historical questionnaire/s 1924/1948 and index cards, partly selected enclosures regarding the history of a German pharmacy, catalogued via Kalliope portal (Historischer Fragebogen 1924/1948 und Karteikarten, ggf. gemeinfreie Anlagen zur Apothekengeschichte; als Katalog dient das Nachlassportal Kalliope): https://kalliope-verbund.info/DE-611-BF-70963 [Funktion: Im Findbuch anzeigen]Please note: The Kalliope catalogue entry might indicate related material in the archival folder which cannot be published due to copyright or other legal restrictions (NB: Das Katalogisat bei Kalliope kann auch auf Materialien - teils erheblichen Umfangs - verweisen, die aus archiv- oder urheberrechtlichen Gründen nicht veröffentlicht werden dürfen).
DOI: 10.15468/dl.kukxwk
title: Occurrence Download

description: A dataset containing 265 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Triraphis schinzii Hack.",
 "Continent is Africa"
 ]
}

 The dataset includes 265 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018743-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13628879
title: KEGNI
DOI: 10.5281/zenodo.14028211
title: KEGNI
DOI: 10.15468/dl.5f3qm7
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Trisetopsis newtonii (Stapf) Röser & A.Wölk",
 "Continent is Africa"
 ]
}

 The dataset includes 3 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018744-241024112534372/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.