cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5888350
title: Fully annotated Human Breast carcinoma cells for 3D segmentation training

description: Fully annotated dataset for training of 3D segmentation models. We provide the Raw image patches in the Raw directory and instance segmentation labels in the RealMask directory, the semantic segmentation masks are provided in the BinaryMask directory. Manually curated from originally published dataset over here: http://celltrackingchallenge.net/3d-datasets/ by team at Kapoorlabs.
description: Computational support provided by Jean Zay dynamic access grant: AD011013396 Monetary Support by Grant#: 2021-240715(5022) from Chan Zuckerberg Innitiative and Silicon Valley community foundation.
DOI: 10.5281/zenodo.6678112
title: A study of techniques to management and control of lianas in Neotropical forests

description: The present dataset presents an update to data published in 2020 (http://dx.doi.org/DOI:10.5281/zenodo.4050477) with additional description related to the effect of lianas on tree and forest structure and diversity, and to contribute to improve decision making on forest restoration and management.
DOI: 10.5281/zenodo.5903898
title: A study of techniques to management and control of lianas in Neotropical forests

description: The present dataset presents an update to data published in 2020 (http://dx.doi.org/DOI:10.5281/zenodo.4050477) with additional description related to the effect of lianas on tree and forest structure and diversity, and to contribute to improve decision making on forest restoration and management.
DOI: 10.5281/zenodo.5211300
title: Stardist model for Ascaidan embryo

description: Stardist trained model for doing object detection of membrane labelled Ascadian mouse embryo cells.
description: Computational support provided by Jean Zay dynamic access grant: AD011013396 Monetary Support by Grant#: 2021-240715(5022) from Chan Zuckerberg Innitiative and Silicon Valley community foundation.
DOI: 10.5281/zenodo.5211299
title: Stardist model for Ascaidan embryo

description: Stardist trained model for doing object detection of membrane labelled Ascadian mouse embryo cells.
description: Computational support provided by Jean Zay dynamic access grant: AD011013396 Monetary Support by Grant#: 2021-240715(5022) from Chan Zuckerberg Innitiative and Silicon Valley community foundation.
DOI: 10.5517/ccdc.csd.cc21j23s
title: CCDC 1892274: Experimental Crystal Structure Determination

description: Related Article: Ania S. Sergeenko, Damir Paripovic, Chahinez Dab, Pierre-François Blanc, Christian Reber, Daniel B. Leznoff|2022|Dalton Trans.|51|9531|doi:10.1039/D2DT00918H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21j24t
title: CCDC 1892275: Experimental Crystal Structure Determination

description: Related Article: Ania S. Sergeenko, Damir Paripovic, Chahinez Dab, Pierre-François Blanc, Christian Reber, Daniel B. Leznoff|2022|Dalton Trans.|51|9531|doi:10.1039/D2DT00918H
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24fy4p
title: CCDC 1979602: Experimental Crystal Structure Determination

description: Related Article: Kishalay Bhar, Wenbin Guo, Mathieu Gonidec, Venkata Nikhil Raj M, Surabhi Bhatt, Franc Perdih, Philippe Guionneau, Guillaume Chastanet, Anuj K. Sharma|2022|Dalton Trans.|51|9302|doi:10.1039/D2DT00416J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24fybw
title: CCDC 1979608: Experimental Crystal Structure Determination

description: Related Article: Kishalay Bhar, Wenbin Guo, Mathieu Gonidec, Venkata Nikhil Raj M, Surabhi Bhatt, Franc Perdih, Philippe Guionneau, Guillaume Chastanet, Anuj K. Sharma|2022|Dalton Trans.|51|9302|doi:10.1039/D2DT00416J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24fycx
title: CCDC 1979609: Experimental Crystal Structure Determination

description: Related Article: Kishalay Bhar, Wenbin Guo, Mathieu Gonidec, Venkata Nikhil Raj M, Surabhi Bhatt, Franc Perdih, Philippe Guionneau, Guillaume Chastanet, Anuj K. Sharma|2022|Dalton Trans.|51|9302|doi:10.1039/D2DT00416J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24fyfz
title: CCDC 1979611: Experimental Crystal Structure Determination

description: Related Article: Kishalay Bhar, Wenbin Guo, Mathieu Gonidec, Venkata Nikhil Raj M, Surabhi Bhatt, Franc Perdih, Philippe Guionneau, Guillaume Chastanet, Anuj K. Sharma|2022|Dalton Trans.|51|9302|doi:10.1039/D2DT00416J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24fyq8
title: CCDC 1979620: Experimental Crystal Structure Determination

description: Related Article: Kishalay Bhar, Wenbin Guo, Mathieu Gonidec, Venkata Nikhil Raj M, Surabhi Bhatt, Franc Perdih, Philippe Guionneau, Guillaume Chastanet, Anuj K. Sharma|2022|Dalton Trans.|51|9302|doi:10.1039/D2DT00416J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24fysb
title: CCDC 1979622: Experimental Crystal Structure Determination

description: Related Article: Kishalay Bhar, Wenbin Guo, Mathieu Gonidec, Venkata Nikhil Raj M, Surabhi Bhatt, Franc Perdih, Philippe Guionneau, Guillaume Chastanet, Anuj K. Sharma|2022|Dalton Trans.|51|9302|doi:10.1039/D2DT00416J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24fytc
title: CCDC 1979623: Experimental Crystal Structure Determination

description: Related Article: Kishalay Bhar, Wenbin Guo, Mathieu Gonidec, Venkata Nikhil Raj M, Surabhi Bhatt, Franc Perdih, Philippe Guionneau, Guillaume Chastanet, Anuj K. Sharma|2022|Dalton Trans.|51|9302|doi:10.1039/D2DT00416J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc24fy6r
title: CCDC 1979604: Experimental Crystal Structure Determination

description: Related Article: Kishalay Bhar, Wenbin Guo, Mathieu Gonidec, Venkata Nikhil Raj M, Surabhi Bhatt, Franc Perdih, Philippe Guionneau, Guillaume Chastanet, Anuj K. Sharma|2022|Dalton Trans.|51|9302|doi:10.1039/D2DT00416J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28cdtw
title: CCDC 2096338: Experimental Crystal Structure Determination

description: Related Article: Henrik Schumann, Marius Klein, Christian Prinzisky, Olaf Burghaus, Jörg Sundermeyer|2022|Dalton Trans.|51|9348|doi:10.1039/D1DT03927J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28cdvx
title: CCDC 2096339: Experimental Crystal Structure Determination

description: Related Article: Henrik Schumann, Marius Klein, Christian Prinzisky, Olaf Burghaus, Jörg Sundermeyer|2022|Dalton Trans.|51|9348|doi:10.1039/D1DT03927J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc28cdwy
title: CCDC 2096340: Experimental Crystal Structure Determination

description: Related Article: Henrik Schumann, Marius Klein, Christian Prinzisky, Olaf Burghaus, Jörg Sundermeyer|2022|Dalton Trans.|51|9348|doi:10.1039/D1DT03927J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc292btk
title: CCDC 2117418: Experimental Crystal Structure Determination

description: Related Article: Xiao-Jiao Song, Yu Jing, Xin Feng, Zhao-Bo Hu, Ming Kong, Xiao-Ming Xue, Yi-Quan Zhang, You Song|2022|Dalton Trans.|51|9233|doi:10.1039/D2DT00684G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29fh08
title: CCDC 2128119: Experimental Crystal Structure Determination

description: Related Article: Junping Tang, Yilun Wang, Wei Bai, Yan Zhou, Wenyan Yu, Yang Li|2022|Dalton Trans.|51|9495|doi:10.1039/D2DT01001A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.5814298
title: White Blood Cells with cytoplasm and surrounding red blood cells

description: This dataset is taken from doi:10.17632/w7cvnmn4c5.1 and is used for segmentation of irregular shaped white blood cells in 2D. We also provide dataset for cytoplasm and we trained StarDist and UNET models to be applied in the VollSeg setting on this dataset.
description: Computational support provided by Jean Zay dynamic access grant: AD011013396 Monetary Support by Grant#: 2021-240715(5022) from Chan Zuckerberg Innitiative and Silicon Valley community foundation.
DOI: 10.5517/ccdc.csd.cc29fxk7
title: CCDC 2128539: Experimental Crystal Structure Determination

description: Related Article: Qian-Cheng Luo, Ning Ge, Yuan-Qi Zhai, Teng-Bo Wang, Lin Sun, Qi Sun, Fanni Li, Zhongwen Ouyang, Zhen-Xing Wang, Yan-Zhen Zheng|2022|Dalton Trans.|51|9218|doi:10.1039/D2DT01131J
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29hhy8
title: CCDC 2130070: Experimental Crystal Structure Determination

description: Related Article: Megan E. Herdman, Melissa V. Werrett, Philip C. Andrews|2022|Dalton Trans.|51|9323|doi:10.1039/D2DT00346E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.5814297
title: White Blood Cells with cytoplasm and surrounding red blood cells

description: This dataset is taken from doi:10.17632/w7cvnmn4c5.1 and is used for segmentation of irregular shaped white blood cells in 2D. We also provide dataset for cytoplasm and we trained StarDist and UNET models to be applied in the VollSeg setting on this dataset.
description: Computational support provided by Jean Zay dynamic access grant: AD011013396 Monetary Support by Grant#: 2021-240715(5022) from Chan Zuckerberg Innitiative and Silicon Valley community foundation.
DOI: 10.5517/ccdc.csd.cc29hhz9
title: CCDC 2130071: Experimental Crystal Structure Determination

description: Related Article: Megan E. Herdman, Melissa V. Werrett, Philip C. Andrews|2022|Dalton Trans.|51|9323|doi:10.1039/D2DT00346E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29hj0c
title: CCDC 2130072: Experimental Crystal Structure Determination

description: Related Article: Megan E. Herdman, Melissa V. Werrett, Philip C. Andrews|2022|Dalton Trans.|51|9323|doi:10.1039/D2DT00346E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29hj1d
title: CCDC 2130073: Experimental Crystal Structure Determination

description: Related Article: Megan E. Herdman, Melissa V. Werrett, Philip C. Andrews|2022|Dalton Trans.|51|9323|doi:10.1039/D2DT00346E
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29k1hf
title: CCDC 2131544: Experimental Crystal Structure Determination

description: Related Article: Katelyn M. Clutterbuck, Brendan F. Abrahams, Timothy A. Hudson, Martin P. van Koeverden|2022|Dalton Trans.|51|9199|doi:10.1039/D1DT04368D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29k1jg
title: CCDC 2131545: Experimental Crystal Structure Determination

description: Related Article: Katelyn M. Clutterbuck, Brendan F. Abrahams, Timothy A. Hudson, Martin P. van Koeverden|2022|Dalton Trans.|51|9199|doi:10.1039/D1DT04368D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29k1kh
title: CCDC 2131546: Experimental Crystal Structure Determination

description: Related Article: Katelyn M. Clutterbuck, Brendan F. Abrahams, Timothy A. Hudson, Martin P. van Koeverden|2022|Dalton Trans.|51|9199|doi:10.1039/D1DT04368D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29k1lj
title: CCDC 2131547: Experimental Crystal Structure Determination

description: Related Article: Katelyn M. Clutterbuck, Brendan F. Abrahams, Timothy A. Hudson, Martin P. van Koeverden|2022|Dalton Trans.|51|9199|doi:10.1039/D1DT04368D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.6482952
title: A synaptomic analysis reveals dopamine hub synapses in the mouse striatum : Source Data

description: Source data for our study on dopamine hub synapses Dopamine transmission is involved in reward processing and motor control, and its impairment plays a central role in numerous neurological disorders. Despite its strong pathophysiological relevance, the molecular and structural organization of the dopaminergic synapse remains to be established. Here, we used targeted labelling and fluorescence activated sorting to purify striatal dopaminergic synaptosomes. We provide the proteome of dopaminergic synapses with 57 proteins specifically enriched. Beyond canonical markers of dopamine neurotransmission such as dopamine biosynthetic enzymes and cognate receptors, we validated 6 proteins not previously described as enriched (Cpne7, Apba1/Mint1, Cadps2, Cadm2/SynCAM 2, Stx4, Mgll). Moreover, our data reveal the adhesion of dopaminergic synapses to glutamatergic, GABAergic or cholinergic synapses in structures we named “dopamine hub synapses”. At glutamatergic synapses, pre- and postsynaptic markers are significantly increased upon association with dopamine synapses. Dopamine hub synapses may thus support local dopaminergic signalling, complementing volume transmission thought to be the major mechanism by which monoamines modulate network activity.
DOI: 10.5517/ccdc.csd.cc2813yd
title: CCDC 2086453: Experimental Crystal Structure Determination

description: Related Article: Lucia Pazderová, Martina Benešová, Jana Havlíčková, Margareta Vojtíčková, Jan Kotek, Přemysl Lubal, Martin Ullrich, Martin Walther, Sabine Schulze, Christin Neuber, Stefan Rammelt, Hans-Jürgen Pietzsch, Jens Pietzsch, Vojtěch Kubíček, Petr Hermann|2022|Dalton Trans.|51|9541|doi:10.1039/D2DT01172G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.6482951
title: A synaptomic analysis reveals dopamine hub synapses in the mouse striatum : Source Data

description: Source data for our study on dopamine hub synapses Dopamine transmission is involved in reward processing and motor control, and its impairment plays a central role in numerous neurological disorders. Despite its strong pathophysiological relevance, the molecular and structural organization of the dopaminergic synapse remains to be established. Here, we used targeted labelling and fluorescence activated sorting to purify striatal dopaminergic synaptosomes. We provide the proteome of dopaminergic synapses with 57 proteins specifically enriched. Beyond canonical markers of dopamine neurotransmission such as dopamine biosynthetic enzymes and cognate receptors, we validated 6 proteins not previously described as enriched (Cpne7, Apba1/Mint1, Cadps2, Cadm2/SynCAM 2, Stx4, Mgll). Moreover, our data reveal the adhesion of dopaminergic synapses to glutamatergic, GABAergic or cholinergic synapses in structures we named “dopamine hub synapses”. At glutamatergic synapses, pre- and postsynaptic markers are significantly increased upon association with dopamine synapses. Dopamine hub synapses may thus support local dopaminergic signalling, complementing volume transmission thought to be the major mechanism by which monoamines modulate network activity.
DOI: 10.5517/ccdc.csd.cc2b6nqy
title: CCDC 2151360: Experimental Crystal Structure Determination

description: Related Article: Björn H. Greijer, Gustav Nestor, Jan E. Eriksson, Gulaim A. Seisenbaeva, Vadim G. Kessler|2022|Dalton Trans.|51|9511|doi:10.1039/D2DT00717G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2b6nrz
title: CCDC 2151361: Experimental Crystal Structure Determination

description: Related Article: Björn H. Greijer, Gustav Nestor, Jan E. Eriksson, Gulaim A. Seisenbaeva, Vadim G. Kessler|2022|Dalton Trans.|51|9511|doi:10.1039/D2DT00717G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.