cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.11881200.v1
title: Supplementary Material for: Validation of a Revised Knowledge Assessment Tool for Children with Inflammatory Bowel Disease (IBD-KID2)

description: <b><i>Introduction:</i></b> For children with inflammatory bowel disease (IBD), acquired knowledge of their condition and treatment is integral to their adherence and self-management. Assessing their knowledge is vital to identify deficits that may affect disease management. IBD-KID2 is a knowledge assessment tool written for children aged 8 years and over with IBD. <b><i>Objectives:</i></b> In order to examine validity and reliability, a study was carried out using IBD-KID2 in a paediatric IBD population and a number of comparator groups with established levels of IBD knowledge. <b><i>Methods:</i></b> IBD-KID2 was administered to 4 participant groups in Christchurch Hospital, New Zealand: children with IBD (<i>n</i> = 22), children without IBD (<i>n</i> = 20), medical staff (<i>n</i> = 15), and administration staff (<i>n</i> = 15). Between-group differences were tested using ANOVA and pairwise comparisons made with the IBD group. Repeat assessments by the IBD group determined test-retest reliability (<i>n</i> = 21). <b><i>Results:</i></b> The mean age (range) of the paediatric groups were: IBD 13.3 years (8–18), without IBD 11.9 years (8–15). Group mean scores (SD) were: IBD 8.5 (±2.3), without IBD 3.7 (±2.2), medical staff 13.5 (±1.3), administration staff 6.3 (±2.5). Group means were all significantly different to the IBD group. Test-retest mean at baseline (8.4, CI ±2.4) and repeat (9.0, CI ±2.4) were not significant. Intraclass correlation<b><i></i></b>coefficient was 0.82. Internal reliability was 0.85, and item-total statistics showed no improvement by specific item removal. <b><i>Conclusions:</i></b> IBD-KID2 could distinguish between groups with different knowledge levels. Repeat assessment shows comparable scores on retest and good reproducibility. IBD-KID2 is a valid and reliable tool for use in the paediatric IBD population.
DOI: 10.6084/m9.figshare.11881209.v1
title: Genome sequence of Staphylococcus aureus SD2

description: This is a genome sequence (proteins) of a clinical isolate of S. aureus resistant to daptomycin.
DOI: 10.6084/m9.figshare.11881221.v2
title: Database: Ministers in Argentina and Brazil (1983-2016)

description: Goal: We compared two countries, Brazil and Argentina, in order to identify similarities and differences in their respective selection and appointment processes for State ministers. This comparison is particularly interesting because, as several authors have shown, unlike Brazil, Argentina has no coalition presidentialism, at least when it comes to ministerial selection. Hence, the comparison could reveal important singularities as to how both presidential regimes form their government team.
DOI: 10.6084/m9.figshare.11881182
title: Supplementary Material for: Glycosylated Hemoglobin as a Surrogate for the Prevention of Cardiovascular Events in Cardiovascular Outcome Trials Comparing New Antidiabetic Drugs to Placebo

description: <b><i>Background and Objectives:</i></b> The value of glycosylated hemoglobin (HbA1c) as a surrogate marker for the prevention of cardiovascular outcomes on antidiabetic drugs is debated. The 2008 FDA guidance led to multiple large clinical trials to evaluate the effect of new antidiabetic drugs versus placebo on major adverse cardiac events (MACE). The aim of this study was to evaluate the relation between MACE and HbA1c decrease between antidiabetic drug and placebo across the spectrum of cardiovascular outcome trials (CVOT). <b><i>Methods:</i></b> In this systematic review, we included randomized controlled trials that compared an antidiabetic drug to placebo in addition to current standard of care with the primary intention of demonstrating cardiovascular safety. We investigated the relationship between MACE decrease on antidiabetic drug and HbA1c reduction on antidiabetic drug using the coefficient correlation. We also studied the effects of potential confounders on MACE decrease. <b><i>Results:</i></b> Fourteen eligible trials including 128,149 patients were included, 12,114 of whom experienced MACE. Mean achieved HbA1c absolute reductions on antidiabetic treatment versus placebo varied from 0.29 to 1%. The decrease of MACE on antidiabetic drug was significantly correlated with mean HbA1c reduction (<i>r</i> = 0.88, 95% CI: 0.67–0.96, <i>p</i> &lt; 0.001) and weight loss (<i>r</i> = 0.81, 95% CI: 0.46–0.94, <i>p</i> &lt; 0.001). In a bivariate model including weight loss, only HbA1c reduction remained significantly correlated with the decrease of MACE on antidiabetic drug (<i>p</i> = 0.019). <b><i>Conclusion:</i></b> Across CVOT, the decrease in MACE incidence on various antidiabetic drugs is significantly correlated with HbA1c reduction. This meta-analysis supports HbA1c as an appropriate surrogate endpoint for cardiovascular events. Our analysis supports that changes in HbA1c should be taken into account while interpreting effects of new antidiabetic drugs on cardiovascular outcomes.
DOI: 10.6084/m9.figshare.11881194
title: Genome sequence of Staphylococcus aureus SD1

description: This is a genome sequence (proteins) of a clinical isolate of S. aureus susceptible to daptomycin.
DOI: 10.6084/m9.figshare.11881176
title: Suppporting_Material_Raw_Data.xlsx

description: A rat model evaluation for the theragnostic imaging parameter and histology parameter
DOI: 10.6084/m9.figshare.11881176.v1
title: Suppporting_Material_Raw_Data.xlsx

description: A rat model evaluation for the theragnostic imaging parameter and histology parameter
DOI: 10.6084/m9.figshare.11881179.v1
title: merged.otu_table_abundancecutoff.biom

description: FOS effectively improved energy acquisition under the role of gut microbiome.<br>
DOI: 10.6084/m9.figshare.11881146
title: Supplementary Material for: Increased Lipid Accumulation under Hypoxia in SZ95 Human Sebocytes

description: <b><i>Background:</i></b> Excessive sebum is produced by specialized cells called sebocytes and is considered a cause or consequence of acne, sebaceous cysts, hyperplasia, and sebaceous adenoma. <b><i>Objective:</i></b> To report changes in lipid accumulation in human sebocytes under hypoxia, which occurs under conditions of seborrhea. <b><i>Methods:</i></b> Sebocytes from the immortalized human gland cell line SZ95 were cultured under conditions of hypoxia for 48 h; lipid formation was confirmed by Nile red and Oil Red O staining. To investigate whether HIF-1α plays a role in lipid accumulation, SZ95 cells transfected or treated with dimethyloxalylglycine (DMOG) were assessed by Nile red. For protein expression of the sterol regulatory element-binding protein-1 (SREBP-1) and perilipin 2 (PLIN2), Western blot analysis was performed. Differentially expressed genes (DEGs) in SZ95 sebocytes under hypoxia were revealed by RNA-Seq analyses, and the statistical significance of the correlation between hypoxic and acne/non-acne skin was evaluated using gene set enrichment analysis. <b><i>Results:</i></b> Hypoxia induces lipid accumulation in SZ95 sebocytes. In addition, the levels of SREBP-1 and PLIN2 were regulated by HIF-1α in SZ95 sebocytes under hypoxia. RNA-Seq analyses of DEGs in SZ95 sebocytes under hypoxia revealed 256 DEGs, including several lipid droplet-associated genes. DEGs between acne and non-acne skin are significantly enriched in hypoxia gene sets. We also detected 93 differentially expressed inflammatory mediators. <b><i>Conclusions:</i></b> To the best of our knowledge, this study is the first to show that a hypoxic microenvironment can increase lipogenesis and provides a link between seborrhea and inflammation.
DOI: 10.6084/m9.figshare.11881143
title: Heritage Finnish Landrace chickens are genetically diverse and geographically structured

description: The Finnish Landrace breed of chickens (in Finnish suomalainen maatiaiskana) traces its origins to almost 1,000 years ago. Today, remnant populations of phenotypically distinct lineages are maintained by a network of volunteer hobbyists in Finland, managed by Natural Resources Institute Finland (Luke). Guided by a prior Major Histocompatibility Complex B-locus haplotype study, we sought now to characterize genetically Finnish Landrace chickens using denser genomic sampling. A new panel of 101 selectively neutral SNP sites was used to interrogate genetic variation in 192 individuals sampled from 13 putatively distinctive population units. Individuals partitioned into <i>K</i> = 11 genetic clusters characterized by high levels of genetic diversity, strong patterns of genetic structure and low levels of inbreeding. Evidence of an undocumented genetic lineage was also discovered. Facilitated by an inexpensive SNP assay, this study shows that the genetic integrity of the Finnish Landrace persists and represents a rich resource of natural (adaptive) genomic variation.
DOI: 10.6084/m9.figshare.11881143.v1
title: Heritage Finnish Landrace chickens are genetically diverse and geographically structured

description: The Finnish Landrace breed of chickens (in Finnish suomalainen maatiaiskana) traces its origins to almost 1,000 years ago. Today, remnant populations of phenotypically distinct lineages are maintained by a network of volunteer hobbyists in Finland, managed by Natural Resources Institute Finland (Luke). Guided by a prior Major Histocompatibility Complex B-locus haplotype study, we sought now to characterize genetically Finnish Landrace chickens using denser genomic sampling. A new panel of 101 selectively neutral SNP sites was used to interrogate genetic variation in 192 individuals sampled from 13 putatively distinctive population units. Individuals partitioned into <i>K</i> = 11 genetic clusters characterized by high levels of genetic diversity, strong patterns of genetic structure and low levels of inbreeding. Evidence of an undocumented genetic lineage was also discovered. Facilitated by an inexpensive SNP assay, this study shows that the genetic integrity of the Finnish Landrace persists and represents a rich resource of natural (adaptive) genomic variation.
DOI: 10.6084/m9.figshare.11881077
title: ARIA-SG Flood Proxy Map: Japan, Typhoon Hagibis, Tokyo, 12 Oct 2019, v0.5

description: This preliminary map shows areas that are likely flooded (shown by light blue pixels of 30 m in size) in central Japan due to heavy rains brought by Typhoon Hagibis. It is validated using aerial images from the Geospatial Information Authority of Japan (GSI). The map extents are indicated by the white polygon. This map should be used as a guidance to identify areas that are likely flooded, and is less reliable over urban and vegetated areas. Derived from synthetic aperture radar data acquired by the Copernicus Sentinel-1 satellites operated by the European Space Agency (ESA) before (24 Sep) and during (12 Oct) the event. Analysed by the ARIA-SG team at the Earth Observatory of Singapore (EOS) in collaboration with NASA-JPL and Caltech. Data processing used an AWS Open Dataset of Copernicus Sentinel-1 data for the Asia region (https://registry.opendata.aws/sentinel1-slc-seasia-pds).
DOI: 10.6084/m9.figshare.11881077.v1
title: ARIA-SG Flood Proxy Map: Japan, Typhoon Hagibis, Tokyo, 12 Oct 2019, v0.5

description: This preliminary map shows areas that are likely flooded (shown by light blue pixels of 30 m in size) in central Japan due to heavy rains brought by Typhoon Hagibis. It is validated using aerial images from the Geospatial Information Authority of Japan (GSI). The map extents are indicated by the white polygon. This map should be used as a guidance to identify areas that are likely flooded, and is less reliable over urban and vegetated areas. Derived from synthetic aperture radar data acquired by the Copernicus Sentinel-1 satellites operated by the European Space Agency (ESA) before (24 Sep) and during (12 Oct) the event. Analysed by the ARIA-SG team at the Earth Observatory of Singapore (EOS) in collaboration with NASA-JPL and Caltech. Data processing used an AWS Open Dataset of Copernicus Sentinel-1 data for the Asia region (https://registry.opendata.aws/sentinel1-slc-seasia-pds).
DOI: 10.6084/m9.figshare.11881059
title: Skin images and analysis for within-trial imaging for assessing cosmetic products

description: Image data and computer vision analysis for participants in a trial of use of cosmetic skin products. Data includes Antera 3D camera imaging at start and end of 4-week trial plus within-trial images taken with a smartphone. Computer vision analysis measures and tracks the changes in skin colour and wrinkles during the trial period. Paper published in Skin Research and Technology Journal, 2020 (DOI to be added when confirmed by publishers)<br>
DOI: 10.6084/m9.figshare.11881053
title: Data for: Deep-Learning-Based Image Segmentation Integrated with Optical Microscopy for Automatically Searching for Two-Dimensional Materials

description: The datasets for "Deep-Learning-Based Image Segmentation Integrated with Optical Microscopy for Automatically Searching for Two- Dimensional Materials", Satoru Masubuchi <i>et al.</i>, npj 2D Materials and Applications (2020).<br>The microscope images are collected using the setup described in "Autonomous robotic searching and assembly of two-dimensional crystals to build van der Waals superlattices", Satoru Masubuchi <i>et al.</i>, Nature Communications (2018).<br>If this helps your research, please cite the papers in your publications.
DOI: 10.6084/m9.figshare.11881047
title: ARIA-SG Flood Proxy Map: Japan, Typhoon Hagibis, Fukushima, 12 Oct 2019, v0.5

description: This preliminary map shows areas that are likely flooded (shown by light blue pixels of 30 m in size) in Fukushima Prefecture due to heavy rains brought by Typhoon Hagibis. It is validated using aerial images from the Geospatial Information Authority of Japan (GSI). The map extents are indicated by the white polygon. This map should be used as a guidance to identify areas that are likely flooded, and is less reliable over urban and vegetated areas. Derived from synthetic aperture radar data acquired by the Copernicus Sentinel-1 satellites operated by the European Space Agency (ESA) before (24 Sep) and during (12 Oct) the event. Analysed by the ARIA-SG team at the Earth Observatory of Singapore (EOS) in collaboration with NASA-JPL and Caltech. Data processing used an AWS Open Dataset of Copernicus Sentinel-1 data for the Asia region (https://registry.opendata.aws/sentinel1-slc-seasia-pds).
DOI: 10.6084/m9.figshare.11881050
title: ARIA Damage Proxy Map: Japan, Typhoon Hagibis, Tokyo, 12 Oct 2019, v0.4

description: The Advanced Rapid Imaging and Analysis (ARIA) team at NASA's Jet Propulsion Laboratory and California Institute of Technology in Pasadena, California, in collaboration with the Earth Observatory of Singapore (EOS), created this Damage Proxy Map (DPM) depicting areas in Japan that are likely damaged (shown by red and yellow pixels) as a result of Typhoon Hagibis that made landfall as a Category 3 storm Saturday night (October 12) local time. The map was derived from Synthetic Aperture Radar (SAR) data acquired around 6am (local time) on October 13, 2019 by the Copernicus Sentinel-1 satellites operated by the European Space Agency (ESA). The pre-event images were taken before (October 7, 2019) and the post-event image was acquired within 12 hours after the hurricane's landfall. The map covers an area of 250 by 350 kilometers, indicated with the big red polygon. Each pixel measures about 30 meters across. The color variation from yellow to red indicates increasingly more significant ground surface change. Media reports provided anecdotal preliminary validation. This damage proxy map should be used as guidance to identify damaged areas, and may be less reliable over vegetated areas and flooded areas. For example, the scattered single colored pixels over vegetated areas may be false positives, and the lack of colored pixels over vegetated areas does not necessarily mean no damage. Copyright: Contains modified Copernicus Sentinel data (2019) processed by ESA, the ARIA team at NASA-JPL and Caltech, and EOS. This task was funded by NASA Disasters Program.
DOI: 10.6084/m9.figshare.11881047.v1
title: ARIA-SG Flood Proxy Map: Japan, Typhoon Hagibis, Fukushima, 12 Oct 2019, v0.5

description: This preliminary map shows areas that are likely flooded (shown by light blue pixels of 30 m in size) in Fukushima Prefecture due to heavy rains brought by Typhoon Hagibis. It is validated using aerial images from the Geospatial Information Authority of Japan (GSI). The map extents are indicated by the white polygon. This map should be used as a guidance to identify areas that are likely flooded, and is less reliable over urban and vegetated areas. Derived from synthetic aperture radar data acquired by the Copernicus Sentinel-1 satellites operated by the European Space Agency (ESA) before (24 Sep) and during (12 Oct) the event. Analysed by the ARIA-SG team at the Earth Observatory of Singapore (EOS) in collaboration with NASA-JPL and Caltech. Data processing used an AWS Open Dataset of Copernicus Sentinel-1 data for the Asia region (https://registry.opendata.aws/sentinel1-slc-seasia-pds).
DOI: 10.6084/m9.figshare.11881044
title: ARIA-SG Flood Proxy Map: Japan, Typhoon Hagibis, Nagano, 15 Oct 2019, v0.1

description: This preliminary map shows areas that are likely flooded (shown by light blue pixels of 25 m in size) in Nagano Prefecture, Japan due to heavy rains brought by Typhoon Hagibis. The map extents are indicated by the white polygon. This map should be used as a guidance to identify areas that are likely flooded, and is less reliable over urban and vegetated areas. Derived from synthetic aperture radar data acquired by the ALOS-2 satellites operated by the Japan Aerospace Exploration Agency (JAXA) before (16 June 2015) and during (15 Oct 2019, UTC 03:37) the event. Data were provided by Sentinel Asia. Analysed by the ARIA-SG team at the Earth Observatory of Singapore (EOS) in collaboration with NASA-JPL and Caltech.
DOI: 10.6084/m9.figshare.11881038
title: ARIA-SG Flood Proxy Map: Japan, Typhoon Hagibis, Ibaraki, 14 Oct 2019, v0.1

description: This preliminary map shows areas that are likely flooded (shown by light blue pixels of 25 m in size) in Ibaraki Prefecture, Japan due to heavy rains brought by Typhoon Hagibis. The map extents are indicated by the white polygon. This map should be used as a guidance to identify areas that are likely flooded, and is less reliable over urban and vegetated areas. Derived from synthetic aperture radar data acquired by the ALOS-2 satellites operated by the Japan Aerospace Exploration Agency (JAXA) before (27 May 2019) and during (14 Oct 2019, UTC 03:17) the event. Data were provided by Sentinel Asia. Analysed by the ARIA-SG team at the Earth Observatory of Singapore (EOS) in collaboration with NASA-JPL and Caltech.
DOI: 10.6084/m9.figshare.11881044.v1
title: ARIA-SG Flood Proxy Map: Japan, Typhoon Hagibis, Nagano, 15 Oct 2019, v0.1

description: This preliminary map shows areas that are likely flooded (shown by light blue pixels of 25 m in size) in Nagano Prefecture, Japan due to heavy rains brought by Typhoon Hagibis. The map extents are indicated by the white polygon. This map should be used as a guidance to identify areas that are likely flooded, and is less reliable over urban and vegetated areas. Derived from synthetic aperture radar data acquired by the ALOS-2 satellites operated by the Japan Aerospace Exploration Agency (JAXA) before (16 June 2015) and during (15 Oct 2019, UTC 03:37) the event. Data were provided by Sentinel Asia. Analysed by the ARIA-SG team at the Earth Observatory of Singapore (EOS) in collaboration with NASA-JPL and Caltech.
DOI: 10.6084/m9.figshare.11881053.v1
title: Data for: Deep-Learning-Based Image Segmentation Integrated with Optical Microscopy for Automatically Searching for Two-Dimensional Materials

description: The datasets for "Deep-Learning-Based Image Segmentation Integrated with Optical Microscopy for Automatically Searching for Two- Dimensional Materials", Satoru Masubuchi <i>et al.</i>, npj 2D Materials and Applications (2020).<br>The microscope images are collected using the setup described in "Autonomous robotic searching and assembly of two-dimensional crystals to build van der Waals superlattices", Satoru Masubuchi <i>et al.</i>, Nature Communications (2018).<br>If this helps your research, please cite the papers in your publications.
DOI: 10.6084/m9.figshare.11881038.v1
title: ARIA-SG Flood Proxy Map: Japan, Typhoon Hagibis, Ibaraki, 14 Oct 2019, v0.1

description: This preliminary map shows areas that are likely flooded (shown by light blue pixels of 25 m in size) in Ibaraki Prefecture, Japan due to heavy rains brought by Typhoon Hagibis. The map extents are indicated by the white polygon. This map should be used as a guidance to identify areas that are likely flooded, and is less reliable over urban and vegetated areas. Derived from synthetic aperture radar data acquired by the ALOS-2 satellites operated by the Japan Aerospace Exploration Agency (JAXA) before (27 May 2019) and during (14 Oct 2019, UTC 03:17) the event. Data were provided by Sentinel Asia. Analysed by the ARIA-SG team at the Earth Observatory of Singapore (EOS) in collaboration with NASA-JPL and Caltech.
DOI: 10.6084/m9.figshare.11881023
title: SIFT scores, GERP scores, and ancestral state of CDS SNP variants

description: SIFT scores, GERP scores, and ancestral state of CDS SNP variants detected by analysis of genome resequencing data from 781 soybean accessions
DOI: 10.6084/m9.figshare.11880963
title: Campylobacter outbreak

description: <br>
DOI: 10.6084/m9.figshare.11880915
title: The Data of Deformed River Terraces in the Eastern Qilian Shan

description: the Eastern Qilian Shan
DOI: 10.6084/m9.figshare.11880915.v1
title: The Data of Deformed River Terraces in the Eastern Qilian Shan

description: the Eastern Qilian Shan
DOI: 10.6084/m9.figshare.11880963.v1
title: Campylobacter outbreak associated with duck blood curd in the Shunyi District of Beijing, China 2019

description: This is data from an outbreak of foodborne diseases caused by Campylobacter.
DOI: 10.6084/m9.figshare.11880963.v2
title: Campylobacter outbreak

description: This is data from an outbreak of foodborne diseases caused by Campylobacter.
DOI: 10.6084/m9.figshare.11880891
title: Material complementario del artículo “Publicidad y fraude académico en motores de búsqueda”

description: Material complementario del artículo “Publicidad y fraude académico en motores de búsqueda”
DOI: 10.6084/m9.figshare.11880891.v1
title: Material complementario del artículo “Publicidad y fraude académico en motores de búsqueda”

description: Material complementario del artículo “Publicidad y fraude académico en motores de búsqueda”
DOI: 10.6084/m9.figshare.11880870
title: Indel and SV variants

description: A set of 5.57 million indel and SV (structural) variants detected by analysis of genome resequencing data from 781 soybean accessions
DOI: 10.6084/m9.figshare.11880870.v1
title: Indel and SV variants

description: A set of 5.57 million indel and SV (structural) variants detected by analysis of genome resequencing data from 781 soybean accessions
DOI: 10.6084/m9.figshare.11880864
title: The Data of Deformed River Terraces in the Eastern Qilian Shan.xlsx

description: the Eastern Qilian Shan
DOI: 10.6084/m9.figshare.11880864.v1
title: The Data of Deformed River Terraces in in the Eastern Qilian Shan.xlsx

description: the Eastern Qilian Shan