cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.23654511
title: Assessment indices of littoral habitat condition for lakes in Maine and New England, United States

description: Deeds J, Amirbahman A, Hugger K, Kaufmann PR, Matthews LJ, Merrell K, Norton SA. 2023. Assessment indices of littoral habitat condition for lakes in Maine and New England, United States. Lake Reserv Manage. 39:141–155. Littoral habitat is critical for lake biota but is adversely affected by residential shoreland development through the loss and reduced structural complexity of lakeshore vegetation. There currently exists no assessment methodology for evaluating littoral habitat condition of individual lakes in the northeastern United States. We addressed this assessment need by creating multimetric indices of littoral habitat condition that focus on lakeshore residential development as the primary stressor. We did this by using habitat metrics derived primarily from National Lake Assessment (NLA) physical habitat (PHAB) survey field observations to create linear discriminant analysis (LDA) models that assign lakeshore stations into littoral habitat condition categories. Lake PHAB survey data were used from New England NLA surveys, as well as state-level surveys completed in Maine, New Hampshire, and Vermont. Prediction success rates in New England models averaged 83%. The Maine LDA models, which used finer scale survey methods, had an average prediction success rate of 89%. We used 95% bootstrapped confidence intervals to make assessment designations of natural (meeting reference quality), diminished (not meeting reference quality), or intermediate (existing between natural and diminished) littoral habitat condition for each lake. Our results show that efficacious single-lake littoral habitat assessments may be completed within the framework of NLA PHAB methodology, but confidence in assessment results, and therefore better informed management decisions, can be improved with finer scale observation data.
DOI: 10.6084/m9.figshare.23654511.v1
title: Assessment indices of littoral habitat condition for lakes in Maine and New England, United States

description: Deeds J, Amirbahman A, Hugger K, Kaufmann PR, Matthews LJ, Merrell K, Norton SA. 2023. Assessment indices of littoral habitat condition for lakes in Maine and New England, United States. Lake Reserv Manage. 39:141–155. Littoral habitat is critical for lake biota but is adversely affected by residential shoreland development through the loss and reduced structural complexity of lakeshore vegetation. There currently exists no assessment methodology for evaluating littoral habitat condition of individual lakes in the northeastern United States. We addressed this assessment need by creating multimetric indices of littoral habitat condition that focus on lakeshore residential development as the primary stressor. We did this by using habitat metrics derived primarily from National Lake Assessment (NLA) physical habitat (PHAB) survey field observations to create linear discriminant analysis (LDA) models that assign lakeshore stations into littoral habitat condition categories. Lake PHAB survey data were used from New England NLA surveys, as well as state-level surveys completed in Maine, New Hampshire, and Vermont. Prediction success rates in New England models averaged 83%. The Maine LDA models, which used finer scale survey methods, had an average prediction success rate of 89%. We used 95% bootstrapped confidence intervals to make assessment designations of natural (meeting reference quality), diminished (not meeting reference quality), or intermediate (existing between natural and diminished) littoral habitat condition for each lake. Our results show that efficacious single-lake littoral habitat assessments may be completed within the framework of NLA PHAB methodology, but confidence in assessment results, and therefore better informed management decisions, can be improved with finer scale observation data.
DOI: 10.6084/m9.figshare.23687868
title: Untitled Item

description: The analysis files for PR RIME in decidual HESCs for paper "TRIM28 modulates nuclear receptor signaling to regulate uterine function".
DOI: 10.6084/m9.figshare.23687868.v1
title: Untitled Item

description: The analysis files for PR RIME in decidual HESCs for paper "TRIM28 modulates nuclear receptor signaling to regulate uterine function".
DOI: 10.5281/zenodo.8136904
title: Supplementary Files - SMILES strings for DOSEDO enumerated library

description: Supplementary Files for Nature Communications publication titled "Diversity-oriented synthesis encoded by deoxyoligonucleotides". Two files contain the Iodo-library and Bromo-library SMILES strings.
DOI: 10.5281/zenodo.8136903
title: Supplementary Files - SMILES strings for DOSEDO enumerated library

description: Supplementary Files for Nature Communications publication titled "Diversity-oriented synthesis encoded by deoxyoligonucleotides". Two files contain the Iodo-library and Bromo-library SMILES strings.
DOI: 10.5281/zenodo.8147763
title: Integrome signatures of lentiviral gene therapy for SCID-X1 patients

description: Files:<br> Supplemental_Table1.xlsx. Recurrent integration genes in all SCID-X1 patients<br> Supplemental_Table2.xlsx. List of all ENCODE datasets used in the analysis<br> Supplementary_Data1_zip: Vector integration sites and their abundance in SCID-X1 patients and CAR T–cell samples
DOI: 10.5281/zenodo.8147762
title: Integrome signatures of lentiviral gene therapy for SCID-X1 patients

description: Files:<br> Supplemental_Table1.xlsx. Recurrent integration genes in all SCID-X1 patients<br> Supplemental_Table2.xlsx. List of all ENCODE datasets used in the analysis<br> Supplementary_Data1_zip: Vector integration sites and their abundance in SCID-X1 patients and CAR T–cell samples
DOI: 10.15139/s3/wcsyfc
title: Nutrition Security Surveillance of City of Atlanta Convenience Stores: Assessment Tool

description: Healthy food access remains a top public health priority. Collecting an accurate and feasible assessment of in-store settings is important to inform local officials and organizations as they consider ways to improve healthy food access for their communities. This data collection tool was developed for a large-scale surveillance of the healthfulness of food and beverages within small-format food retailers, like convenience/corner stores, gas-marts, pharmacies, and dollar stores, across Atlanta, GA, USA. The purpose of the tool is to offer a brief (approx. 15 minutes) and objective measure of the consumer food environment (product, price, placement, promotion) for primarily on-the-go snacks and beverages. The tool was informed and adapted from previously validated store assessment tools and collected information on the availability, prices, promotional placement, quality (for fresh produce only) and shelf space of select product categories, including: sugar sweetened beverages, bottled water, packaged sweet and salty ultra-processed snacks, and fresh produce. Specific food and beverage products chosen for the tool were informed from previous sources prioritizing products most offered in small format food stores. Product brands and sizes were also updated after a round of field testing in the Atlanta Metro. In addition, several store characteristics, such as store type, and number of registers and aisles, were collected to provide a better understanding of the store environment.
DOI: 10.5281/zenodo.8147768
title: Network operator KPIs time series dataset

description: This dataset contains the measurements of different key performance indicators (KPIs) of the usage of a network operator's infrastructure. It provides time series with the evolution of the KPIs measured every 5 minutes for a time interval greather than one month. The measurements correspond to different operator locations. Four different KPIs are provided in the dataset: aggregated Internet traffic (in bits per second), downstream traffic (in bits per second), number of active client sessions, and Virtual Private Network (VPN) traffic (in bits per second). The results have been anonymized, the time frame has been shifted so that the first timestamp of each time series is 0 and the values of the KPIs have been scaled, so that they range from 0 to 1000 in each time series.
DOI: 10.5281/zenodo.8147767
title: Network operator KPIs time series dataset

description: This dataset contains the measurements of different key performance indicators (KPIs) of the usage of a network operator's infrastructure. It provides time series with the evolution of the KPIs measured every 5 minutes for a time interval greather than one month. The measurements correspond to different operator locations. Four different KPIs are provided in the dataset: aggregated Internet traffic (in bits per second), downstream traffic (in bits per second), number of active client sessions, and Virtual Private Network (VPN) traffic (in bits per second). The results have been anonymized, the time frame has been shifted so that the first timestamp of each time series is 0 and the values of the KPIs have been scaled, so that they range from 0 to 1000 in each time series.
DOI: 10.34740/kaggle/dsv/5710687
title: HealthCare Dataset
DOI: 10.6084/m9.figshare.23687949
title: Phylogeny alignment files

description: Alignment files for cox1, ef1-alpha, and a concatenated file for Myrsidae and Brueelia samples generated using the program MAFFT.
DOI: 10.5517/ccdc.csd.cc2gkq1t
title: CCDC 2281136: Experimental Crystal Structure Determination

description: Related Article: W. Clegg, J.D. Kennedy, C. O'Dowd|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gkq2v
title: CCDC 2281137: Experimental Crystal Structure Determination

description: Related Article: W. Clegg, J.D. Kennedy, C. O'Dowd|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gkq3w
title: CCDC 2281138: Experimental Crystal Structure Determination

description: Related Article: W. Clegg, J.D. Kennedy, C. O'Dowd|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gkq4x
title: CCDC 2281139: Experimental Crystal Structure Determination

description: Related Article: W. Clegg, J.D. Kennedy, C. O'Dowd|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.8147811
title: pseudorimula_midatlantica_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.8147810
title: pseudorimula_midatlantica_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.8147836
title: Insularity determines nestling sex ratio variation in Egyptian vulture populations

description: Excel dataset
DOI: 10.5281/zenodo.8147835
title: Insularity determines nestling sex ratio variation in Egyptian vulture populations

description: Excel dataset
DOI: 10.5281/zenodo.7879341
title: COPE

description: Unsupervised datasets of posts scraped from Incels.is and Il forum dei brutti.
DOI: 10.5281/zenodo.7933656
title: COPE

description: Unsupervised datasets of posts scraped from Incels.is and Il forum dei brutti.
DOI: 10.5281/zenodo.7879340
title: COPE

description: Unsupervised datasets of posts scraped from Incels.is and Il forum dei brutti.
DOI: 10.5281/zenodo.8147845
title: COPE

description: Unsupervised datasets of posts scraped from Incels.is and Il forum dei brutti.
DOI: 10.6084/m9.figshare.23688713
title: ISOVIZ Output from A structural study of PrCrO<sub>3</sub> under extreme conditions: a comparison with the effects of doping

description: Symmetry Adapted Mode Analysis
DOI: 10.6084/m9.figshare.23688713.v1
title: ISOVIZ Output from A structural study of PrCrO<sub>3</sub> under extreme conditions: a comparison with the effects of doping

description: Symmetry Adapted Mode Analysis
DOI: 10.5281/zenodo.8147896
title: sarracenia_leucophylla_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.8147895
title: sarracenia_leucophylla_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.8147924
title: sarracenia_alabamensis_spades_01.fasta.gz

description: .
DOI: 10.5281/zenodo.8147923
title: sarracenia_alabamensis_spades_01.fasta.gz

description: .
DOI: 10.17909/dyck-vk86
title: All JWST Cycle 1 Wavefront Sensing Data

description: NIRCam wavefront sensing data (WLP8,WLM8) from the JWST Cycle 1 Wavefront Sensing programs (PIDs 2586, 2724, 2725, 2726). See also the MAST collection "JWST WSS" for the telescope wavefront measurements derived from these data.
DOI: 10.6084/m9.figshare.23591453
title: Opportunities for enhancing the climate resilience of coffee production through improved crop, soil and water management

description: Climate change is adversely affecting coffee production, impacting both yields and quality. Coffee production is dominated by the cultivation of Arabica and Robusta coffee, species that represent 99% of production, but both will be affected by climate change. Sustainable management practices that can enhance the resilience of production and livelihoods to climate change are urgently needed as production supports the livelihoods of over 25 million people globally, the majority of whom are smallholder farmers located in the coffee belt spanning the tropics. These communities are already experiencing the impacts of climate change. We conducted a systematic review, identifying 80 studies that describe the direct and indirect impacts of climate change on coffee agroecosystems, or that identify agroecological practices with the potential to enhance climate resilience. Adverse environmental impacts include a reduction in area suitable for production, lower yields, increased intensity and frequency of extreme climate events, and greater incidence of pests and diseases. Potential environmental solutions include altitudinal shifts, new, resilient cultivars, altering agrochemical inputs, and agroforestry. However, financial, environmental and technical constraints limit the availability of many of these approaches to farmers, particularly smallholder producers. There is therefore an urgent need to address these barriers through policy and market mechanisms, and stakeholder engagement to continue meeting the growing demand for coffee.
DOI: 10.6084/m9.figshare.23591453.v1
title: Opportunities for enhancing the climate resilience of coffee production through improved crop, soil and water management

description: Climate change is adversely affecting coffee production, impacting both yields and quality. Coffee production is dominated by the cultivation of Arabica and Robusta coffee, species that represent 99% of production, but both will be affected by climate change. Sustainable management practices that can enhance the resilience of production and livelihoods to climate change are urgently needed as production supports the livelihoods of over 25 million people globally, the majority of whom are smallholder farmers located in the coffee belt spanning the tropics. These communities are already experiencing the impacts of climate change. We conducted a systematic review, identifying 80 studies that describe the direct and indirect impacts of climate change on coffee agroecosystems, or that identify agroecological practices with the potential to enhance climate resilience. Adverse environmental impacts include a reduction in area suitable for production, lower yields, increased intensity and frequency of extreme climate events, and greater incidence of pests and diseases. Potential environmental solutions include altitudinal shifts, new, resilient cultivars, altering agrochemical inputs, and agroforestry. However, financial, environmental and technical constraints limit the availability of many of these approaches to farmers, particularly smallholder producers. There is therefore an urgent need to address these barriers through policy and market mechanisms, and stakeholder engagement to continue meeting the growing demand for coffee.
DOI: 10.6084/m9.figshare.23629972
title: Agroecological transitions to sustainability and biosphere reserves

description: We examine the potential of local agroecological transitions to sustainability in Spain and their interaction with Biosphere Reserve (BR) designation. The BR program has experienced great success in Spain however questions linger regarding their contribution to agricultural sustainability. Here, we evaluate the performance of two selected local agroecological initiatives through a Coupled Human and Natural Systems (CHANS) approach focusing, specifically, on their potential contribution to community resilience. To do so, we collected survey data from participants in one local agroecological initiative in the non-BR designated “La Vera” area and in the “Mariñas Coruñesas e Terras do Mandeo” BR. We found that participants valued positively the achievements of both initiatives but identified two important obstacles for CHANS community resilience: 1) lack of economic competitiveness of the products and services offered due to the higher prices of agroecological products when compared with conventionally produced market-oriented competitors and, 2) governance obstacles related to subsidy dependence and excessive governmental regulations of local community management practices and decision-making. Though there were no statistically significant differences between BR and non-BR survey data, non-BR respondents did identify more governance issues than BR respondents suggesting that BR designation may empower local communities institutionally providing them with more decision-making leverage in their interactions with the administration.
DOI: 10.6084/m9.figshare.23629972.v1
title: Agroecological transitions to sustainability and biosphere reserves

description: We examine the potential of local agroecological transitions to sustainability in Spain and their interaction with Biosphere Reserve (BR) designation. The BR program has experienced great success in Spain however questions linger regarding their contribution to agricultural sustainability. Here, we evaluate the performance of two selected local agroecological initiatives through a Coupled Human and Natural Systems (CHANS) approach focusing, specifically, on their potential contribution to community resilience. To do so, we collected survey data from participants in one local agroecological initiative in the non-BR designated “La Vera” area and in the “Mariñas Coruñesas e Terras do Mandeo” BR. We found that participants valued positively the achievements of both initiatives but identified two important obstacles for CHANS community resilience: 1) lack of economic competitiveness of the products and services offered due to the higher prices of agroecological products when compared with conventionally produced market-oriented competitors and, 2) governance obstacles related to subsidy dependence and excessive governmental regulations of local community management practices and decision-making. Though there were no statistically significant differences between BR and non-BR survey data, non-BR respondents did identify more governance issues than BR respondents suggesting that BR designation may empower local communities institutionally providing them with more decision-making leverage in their interactions with the administration.
DOI: 10.6084/m9.figshare.23623488.v1
title: Ethnobiological survey to determine the link between health benefits and qualities of Maasai traditional food system in Monduli, Arusha, Tanzania

description: Although Maasai’s traditional food system (TFS) is claimed to keep a low prevalence of metabolic diseases (MD), the link between its qualities and health benefits is not well established. An ethnobotanical survey was conducted to determine the link between health benefits and qualities of the Maasai TFS in Monduli, Arusha, Tanzania. The survey involved 21 Maasai TFS practitioners (MTPs) and revealed that the TFS has varieties of 19 dishes and a diversity of 78 flora species. The diversity of dishes and species had various potential health benefits: nutrition like Fe and vitamin A; therapeutic and protective effects against ailments including MD like gout, pressure, indigestion, and kidney disorders. Some food processing technologies (FPT) like nixtamalization, and meat roasting had potential protective effects against the MD. Cultural preferences and restrictions (CPR) for the food selection insured individual nutritional and health needs are met, and reinforcement of Maasai socio-structure and cohesion. Integrated protection and promotion measures are required to prevent unplanned nutritional transitions away from the TFS. Further research on the nutritional and medicinal roles of some FPT and the frequently used species could facilitate the protection and use of the TFS for the health benefits of especially marginalized people. Traditional food system (TFS) keeps a low prevalence of ailments including metabolic diseases (MD) in indigenous communities that uphold the cultural practices of their TFS.A variety of 19 Maasai foods (dishes) and a diversity of 78 flora species distributed in 63 genera and 39 families were parts of the Maasai TFS.Animal-based products, cereals, pulses, fruits, roots, and vegetables were the most frequently used food items in the Maasai TFS.Maasai food processing technologies FPT, a diversity of dishes and flora species, and cultural preferences and restrictions (CPR) developed for food selection constitute the qualities of the Maasai TFS.FPT, a diversity of dishes and flora species, and CPR are linked to health and cultural benefits. Traditional food system (TFS) keeps a low prevalence of ailments including metabolic diseases (MD) in indigenous communities that uphold the cultural practices of their TFS. A variety of 19 Maasai foods (dishes) and a diversity of 78 flora species distributed in 63 genera and 39 families were parts of the Maasai TFS. Animal-based products, cereals, pulses, fruits, roots, and vegetables were the most frequently used food items in the Maasai TFS. Maasai food processing technologies FPT, a diversity of dishes and flora species, and cultural preferences and restrictions (CPR) developed for food selection constitute the qualities of the Maasai TFS. FPT, a diversity of dishes and flora species, and CPR are linked to health and cultural benefits.