cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.13145/bacdive21445.20170425.1
title: Sorangium cellulosum

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive21446.20170425.1
title: Sorangium cellulosum

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive21447.20170425.1
title: Sorangium cellulosum

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive21448.20170425.1
title: Sorangium cellulosum

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive130947.20170425.1
title: Enterococcus hirae Farrow and Collins 1985

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive16456.20170425.1
title: Streptomyces plumbiresistens Guo et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive16457.20170425.1
title: Streptomyces sedi Li et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive16458.20170425.1
title: Streptomyces axinellae Pimentel-Elardo et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive16459.20170425.1
title: Streptomyces hypolithicus Le Roes-Hill et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive16460.20170425.1
title: Streptomyces avicenniae Xiao et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive16461.20170425.1
title: Streptomyces atriruber Labeda et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive16462.20170425.1
title: Streptomyces silaceus Labeda et al. 2009

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive17321.20170425.1
title: Vibrio fluvialis Lee et al. 1981

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive17322.20170425.1
title: Vibrio gazogenes (Harwood et al. 1980) Baumann et al. 1981

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive17323.20170425.1
title: Vibrio metschnikovii Gamaleia 1888

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.14469/hpc/13790
title: Compound 6S. 13C Data

description: NMR Data
DOI: 10.6084/m9.figshare.7480547.v2
title: Fast Computation of Tukey Trimmed Regions and Median in Dimension <i>p</i> &gt; 2

description: Given data in Rp, a Tukey <i>κ</i>-trimmed region is the set of all points that have at least Tukey depth <i>κ</i> w.r.t. the data. As they are visual, affine equivariant and robust, Tukey regions are useful tools in nonparametric multivariate analysis. While these regions are easily defined and interpreted, their practical use in applications has been impeded so far by the lack of efficient computational procedures in dimension <i>p</i> &gt; 2. We construct two novel algorithms to compute a Tukey <i>κ</i>-trimmed region, a naïve one and a more sophisticated one that is much faster than known algorithms. Further, a strict bound on the number of facets of a Tukey region is derived. In a large simulation study the novel fast algorithm is compared with the naïve one, which is slower and by construction exact, yielding in every case the same correct results. Finally, the approach is extended to an algorithm that calculates the innermost Tukey region and its barycenter, the Tukey median. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.13245853.v1
title: Additional file 2 of Metabolomic signatures for visceral adiposity and dysglycaemia in Asian Chinese and Caucasian European adults: the cross-sectional TOFI_Asia study

description: Additional file 2. Table S1: Internal standard added to extraction solvent for monitoring signal variation during instrumental analysis. Table S2: Data pre-processing parameters for lipidomic profile (XCMS) and HILIC profile (ADAP). Table S3: Differentially expressed lipid species between Caucasian and Asian Chinese. Table S4: Differentially expressed metabolites between Caucasian and Asian Chinese. Table S5: Metabolites associated with FPG in Caucasian and/or Asian Chinese analysed by multiple linear regression adjusted for gender, age and BMI (BH-corrected p&lt;0.05). Table S6: Metabolites associated with %VATTBF in Caucasian and/or Asian Chinese analysed by multiple linear regression adjusted for gender, age and BMI (BH-corrected p&lt;0.05). Table S7: Metabolites associated with FPG and/or %VATTBF in Caucasian analysed by multiple linear regression adjusted for gender, age and BMI (BH-corrected p&lt;0.05). The list of metabolites is ordered by the variable importance in ramdon forest, and the top 100 variables (from unknown X160_HP_241.0719_12.18 to unknown LP_802.5932_348.16) were selected for sample restratification. Table S8: Metabolites associated with FPG and/or %VATTBF in Asian Chinese analysed by multiple linear regression adjusted for gender, age and BMI (BH-corrected p&lt;0.05). The list of metabolites is ordered by the variable importance in random forest, and the top 100 variables (from unknown X160_HP_241.0719_12.18 to PE(P-36:1)) were selected for sample restratification.
DOI: 10.14469/hpc/13794
title: Compound 7 S 13C Data

description: NMR Data
DOI: 10.6084/m9.figshare.13245890
title: Additional file 1 of Identification of candidate genes conferring tolerance to aluminum stress in Pinus massoniana inoculated with ectomycorrhizal fungus

description: Additional file 1: Table S1. Primer sequences used for qRT-PCR in this study.
DOI: 10.6092/unibo/amsacta/7549
title: Nano-immunoEra_WP1_Design of tailored bioresponsive elements for antibody detection_Task 1.2_identification, selection and testing of antigen-NA chimera probe for antibody detection

description: The presented dataset contains data and images produced in the framework of the Horizon Europe Nano-immunoERA project, regarding identification, selection and testing of antigen-nucleic acid (NA) chimera probe for antibody detection.Here, we show that Toehold Switch DNA hairpins, presenting a rationally designed locked protospacer adjacent motif (PAM) in the loop, can be used to control Cas12a in response to molecular inputs inclouding IgG antibodies.Reconfiguring the Toehold Switch DNA from a hairpin to a duplex conformation through a strand displacement reaction provides an effective means to modulate the accessibility of the PAM, thereby controlling the binding and cleavage activities of Cas12a.Through this approach, we showcase the potential to trigger downstream Cas12a activity by leveraging proximity-based strand displacement reactions in response to target binding.Our system enables rapid, one-pot detection of IgG antibodies and small molecules with high sensitivity and specificity
DOI: 10.6084/m9.figshare.13245890.v1
title: Additional file 1 of Identification of candidate genes conferring tolerance to aluminum stress in Pinus massoniana inoculated with ectomycorrhizal fungus

description: Additional file 1: Table S1. Primer sequences used for qRT-PCR in this study.
DOI: 10.6084/m9.figshare.13245895.v1
title: Additional file 10 of A comprehensive analysis of cotton VQ gene superfamily reveals their potential and extensive roles in regulating cotton abiotic stress

description: Additional file 10: Table S5. List of predicted known microRNA target sites of VQ transcripts in Gossypium species.
DOI: 10.6084/m9.figshare.13245907.v1
title: Additional file 14 of A comprehensive analysis of cotton VQ gene superfamily reveals their potential and extensive roles in regulating cotton abiotic stress

description: Additional file 14: Table S7. Information regarding the Co-expression and STRING search results of the interaction networks of the GhVQs.
DOI: 10.14469/hpc/13795
title: Compound 7S 1H Data

description: NMR Data
DOI: 10.25402/epi.16917580
title: Stress and Spirituality in relation to HPA Axis Gene Methylation among U.S. Black Women: Results from the BWHS and SSSH

description: <b>Supplementary Table 1. Pyrosequencing information</b>
 <b>Supplementary Table 2</b>.
 Multivariable-adjusted differences in CpG-specific HSD11B1/2 and
 NR3C1
 percent methylation levels according to experience of
 psychosocial stress among 1000 Black Women's Health Study participants with methylation data
 <b>Supplementary Table 3</b>.
 Multivariable-adjusted differences in CpG-specific FKBP5 percent
 methylation levels (CC genotype) according to experience of psychosocial
 stress among 1000 Black Women's Health Study participants with methylation data
 <b>Supplementary Table 4</b>.
 Multivariable-adjusted differences in CpG-specific FKBP5 percent
 methylation levels (CT/TT genotype) according to experience of psychosocial
 stress among 1000 Black Women's Health Study participants with methylation data
DOI: 10.25402/epi.16917580.v1
title: Stress and Spirituality in relation to HPA Axis Gene Methylation among U.S. Black Women: Results from the BWHS and SSSH

description: <b>Supplementary Table 1. Pyrosequencing information</b>
 <b>Supplementary Table 2</b>.
 Multivariable-adjusted differences in CpG-specific HSD11B1/2 and
 NR3C1
 percent methylation levels according to experience of
 psychosocial stress among 1000 Black Women's Health Study participants with methylation data
 <b>Supplementary Table 3</b>.
 Multivariable-adjusted differences in CpG-specific FKBP5 percent
 methylation levels (CC genotype) according to experience of psychosocial
 stress among 1000 Black Women's Health Study participants with methylation data
 <b>Supplementary Table 4</b>.
 Multivariable-adjusted differences in CpG-specific FKBP5 percent
 methylation levels (CT/TT genotype) according to experience of psychosocial
 stress among 1000 Black Women's Health Study participants with methylation data
DOI: 10.6084/m9.figshare.14820901.v1
title: Additional file 4 of TeaAS: a comprehensive database for alternative splicing in tea plants (Camellia sinensis)

description: Additional file 4: Table S3. Information of differentially expressed AS by rMATS analysis.
DOI: 10.6084/m9.figshare.14820892
title: Additional file 1 of TeaAS: a comprehensive database for alternative splicing in tea plants (Camellia sinensis)

description: Additional file 1: Table S1. Details of 66 RNA-seq dataset.
DOI: 10.6084/m9.figshare.7480547.v1
title: Fast computation of Tukey trimmed regions and median in dimension <i>p</i> &gt; 2

description: Given data in ℝp, a Tukey <i>κ</i>-trimmed region is the set of all points that have at least Tukey depth <i>κ</i> w.r.t. the data. As they are visual, affine equivariant and robust, Tukey regions are useful tools in nonparametric multivariate analysis. While these regions are easily defined and interpreted, their practical use in applications has been impeded so far by the lack of efficient computational procedures in dimension <i>p</i> &gt; 2. We construct two novel algorithms to compute a Tukey <i>κ</i>-trimmed region, a naïve one and a more sophisticated one that is much faster than known algorithms. Further, a strict bound on the number of facets of a Tukey region is derived. In a large simulation study the novel fast algorithm is compared with the naïve one, which is slower and by construction exact, yielding in every case the same correct results. Finally, the approach is extended to an algorithm that calculates the innermost Tukey region and its barycenter, the Tukey median. Supplementary material is available online.
DOI: 10.6084/m9.figshare.7480547
title: Fast Computation of Tukey Trimmed Regions and Median in Dimension <i>p</i> &gt; 2

description: Given data in Rp, a Tukey <i>κ</i>-trimmed region is the set of all points that have at least Tukey depth <i>κ</i> w.r.t. the data. As they are visual, affine equivariant and robust, Tukey regions are useful tools in nonparametric multivariate analysis. While these regions are easily defined and interpreted, their practical use in applications has been impeded so far by the lack of efficient computational procedures in dimension <i>p</i> &gt; 2. We construct two novel algorithms to compute a Tukey <i>κ</i>-trimmed region, a naïve one and a more sophisticated one that is much faster than known algorithms. Further, a strict bound on the number of facets of a Tukey region is derived. In a large simulation study the novel fast algorithm is compared with the naïve one, which is slower and by construction exact, yielding in every case the same correct results. Finally, the approach is extended to an algorithm that calculates the innermost Tukey region and its barycenter, the Tukey median. Supplementary materials for this article are available online.
DOI: 10.6084/m9.figshare.5907829.v1
title: CALCULATION OF CATALYTIC REACTIVITY FOR PREPARING DICHLORODIMETHYLSILANE UTILIZING PRE- AND POST-MODIFIED 24T AlCl3/ZSM-5

description: Dichlorodimethylsilane is the most important raw material for the preparation of organic silicon materials. Currently, the preparation of dichlorodimethylsilane is mainly based on disproportionation method. This method can turn wastes (by-products) into treasures but the mechanism is still indeterminate. In this study, MP2/6-311++G (3df, 2pd) basis set was used to study the mechanism of the disproportionation for producing dichlorodimethylsilane. Dichlorodimethylsilane is catalyzed by 24T cluster AlCl3/ZSM-5 catalyst and modified by (AlCl2)+, and (BCl2)+. The calculation results show that the rate-determining step is the reaction of the catalyst with trimethylchlorosilane . The activation energy of the rate-determining step of main reaction is: 393.83, 427.73, and 527.61 kJ mol-1, respectively. The structure analysis, activation energy analysis and LOL analysis for different catalysts all show that the catalytic effect of unmodified AlCl3/ZSM-5 is better.
DOI: 10.48479/shtp-2015
title: The RATT PARROT: serendipitous discovery of a peculiarly scintillating pulsar in MeerKAT imaging observations of the Great Saturn-Jupiter Conjunction of 2020. I. Dynamic imaging and data analysis.

description: We report on a radiopolarimetric observation of the Saturn-Jupiter Great Conjunction of 2020 using the MeerKAT L-band system, initially carried out for science verification purposes, which yielded a serendipitous discovery of a pulsar. The radiation belts of Jupiter are very bright and time variable: coupled with the sensitivity of MeerKAT, this necessitated development of dynamic imaging techniques, reported on in this work. We present a deep radio "movie" revealing Jupiter's rotating magnetosphere, a radio detection of Callisto, and numerous background radio galaxies. We also detect a bright radio transient in close vicinity to Saturn, lasting approximately 45 minutes. Follow-up deep imaging observations confirmed this as a faint compact variable radio source, and yielded detections of pulsed emission by the commensal MeerTRAP search engine, establishing the object's nature as a radio emitting neutron star, designated PSR J2009-2026. A further observation combining deep imaging with the PTUSE pulsar backend measured detailed dynamic spectra for the object. While qualitatively consistent with scintillation, the magnitude of the magnification events and the characteristic timescales are odd. We are tentatively designating this object a pulsar with anomalous refraction recurring on odd timescales (PARROT). As part of this investigation, we present a pipeline for detection of variable sources in imaging data, with dynamic spectra and lightcurves as the products, and compare dynamic spectra obtained from visibility data with those yielded by PTUSE. We discuss MeerKAT's capabilities and prospects for detecting more of such transients and variables.
DOI: 10.6084/m9.figshare.13245910
title: Additional file 15 of A comprehensive analysis of cotton VQ gene superfamily reveals their potential and extensive roles in regulating cotton abiotic stress

description: Additional file 15: Table S8. Primers used for qPCR analyses of GhVQs.
DOI: 10.6084/m9.figshare.14820908
title: Additional file 3 of Limited recurrence distance of glioblastoma under modern radiotherapy era

description: Additional file 3.
DOI: 10.6084/m9.figshare.24952944
title: Dataset and code for China’s low-carbon policy intensity from national- to prefecture-level over 2007-2022

description: This zip file contains dataset and code of our paper. Both the aggregated low-carbon intensity and intensity for each policy are provided in the dataset.
DOI: 10.34740/kaggle/ds/4368092
title: Graduation from Czech universities
DOI: 10.6084/m9.figshare.23906447
title: Epidemiology of adverse drug reactions to antihypertensive, antithrombotic and antidiabetic medications among adult inpatients at a National Referral Hospital, Uganda

description: Treatment for hypertension, thrombosis and type 2 diabetes mellitus is long term and usually requires a combination of drugs which increases the risk of adverse drug reactions (ADRs). This study aimed to establish the prevalence at admission, incidence during hospitalization and characteristics of ADRs linked to antihypertensive, antithrombotic and antidiabetic drugs among adult inpatients in Uganda. We conducted a secondary analysis of data from a previously assembled prospective cohort study in Uganda’s Mulago National Referral Hospital. We reviewed the files of inpatients who received antihypertensive, antithrombotic and/or antidiabetic medications prior to and/or during hospitalization. The modified Schumock and Thornton Preventability Scale, the Division of AIDS Table for Grading the Severity of Adult and Paediatric Adverse Events and the World Health Organization – Uppsala Monitoring Centre seriousness criteria were used to characterize the ADRs. More than a quarter (27%, 42/155) of the inpatients experienced an ADR at admission or during hospitalization. The point prevalence of ADRs at admission was 8% (13/155) and the incidence of ADRs during hospitalization was 23% (36/155). Forty-one percent (35/86) of the ADRs were serious and the majority (59%, 51/86) were preventable. One in 13 inpatients experienced an ADR on admission and one in four experienced an ADR that developed during hospitalization. Clinicians ought to prescribe medicines with lower ADR risk profile for cardiovascular and/or diabetic patients whenever possible.
DOI: 10.6084/m9.figshare.23906447.v1
title: Epidemiology of adverse drug reactions to antihypertensive, antithrombotic and antidiabetic medications among adult inpatients at a National Referral Hospital, Uganda

description: Treatment for hypertension, thrombosis and type 2 diabetes mellitus is long term and usually requires a combination of drugs which increases the risk of adverse drug reactions (ADRs). This study aimed to establish the prevalence at admission, incidence during hospitalization and characteristics of ADRs linked to antihypertensive, antithrombotic and antidiabetic drugs among adult inpatients in Uganda. We conducted a secondary analysis of data from a previously assembled prospective cohort study in Uganda’s Mulago National Referral Hospital. We reviewed the files of inpatients who received antihypertensive, antithrombotic and/or antidiabetic medications prior to and/or during hospitalization. The modified Schumock and Thornton Preventability Scale, the Division of AIDS Table for Grading the Severity of Adult and Paediatric Adverse Events and the World Health Organization – Uppsala Monitoring Centre seriousness criteria were used to characterize the ADRs. More than a quarter (27%, 42/155) of the inpatients experienced an ADR at admission or during hospitalization. The point prevalence of ADRs at admission was 8% (13/155) and the incidence of ADRs during hospitalization was 23% (36/155). Forty-one percent (35/86) of the ADRs were serious and the majority (59%, 51/86) were preventable. One in 13 inpatients experienced an ADR on admission and one in four experienced an ADR that developed during hospitalization. Clinicians ought to prescribe medicines with lower ADR risk profile for cardiovascular and/or diabetic patients whenever possible.
DOI: 10.6084/m9.figshare.24155272
title: Adverse event profile of CGRP monoclonal antibodies: findings from the FDA adverse event reporting database

description: Four CGRP Monoclonal Antibodies (mAbs) have been approved for migraine prophylaxis by the Food and Drug Administration (FDA) since 2018. However, there are concerns about the safety of these four drugs for real-world use. To compare the adverse event profiles of four CGRP-mAbs with FAERS data. The study was based on records from the FAERS database. Only reports containing one of the active ingredients with CGRP-mAbs were included in this study. Disproportionality analyses including but not limited to reporting odds ratio (ROR) and information components (IC) were conducted to identify drug-AE associations. In total, 58110 reports were identified for CGRP-mAbs. 80 overlapping signals were disproportionately reported. They affected a range of organs and systems, including the gastrointestinal and cardiovascular systems, skin, and hair. Additionally, the rare cardiovascular adverse events were significantly different among the four CGRP-mAbs. We identified numerous shared underlying signals (overlapping signals) for CGRP-mAbs as suspected drugs in multiple systems and organs. The unlabeled common signals may indicate potential safety issues. In addition, the underlying safety signals varied among the four CGRP-mAbs, particularly in the cardiovascular system, and further studies are needed to confirm these associations and the potential clinical implications.