cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.30931337.v1
title: Supplementary Material for: Repeated Forced-swim stress modulates neural structure and hepatic gene expression in the stress mice model

description: Introduction: Throughout time, there has always been a trend connecting stress and tangible damage to one’s physical well-being. However, there’s a lack of research that elucidates the physical and molecular traits of this stress on organ integrity. Chronic stress disrupts homeostasis, causing oxidative stress, mitochondrial dysfunction, inflammatory markers, and histological damage. Methods: In this study, a repeated forced swim stress (FSS) was used to induce stress in the C57BL/6 mice model and analyzed its effects on the brain and liver at behavioral, biochemical, histology, and genetic marker levels. Results: Behavioral analysis showed reduced mobility duration in experimental mice. This was further supplemented by histopathological data, which revealed mild brain deterioration and moderate liver damage. Biochemical analysis revealed upregulated levels of aminotransferase (ALT) and alkaline phosphatase (ALP) and decreased levels of mean corpuscular haemoglobin (MCH), pointing towards the existence of liver dysfunctionality due to stress. Moreover, we reported the gene expression analysis of stress biomarkers (Bdnf, Fkbp5, Npy, Comt, Ppm1f, Adra2b, and Slc6a4), with a particular focus on Fkbp5, which is associated with depression and cognitive impairment. Similarly, we also studied the expressions of Crp, Cyp2e1, and Irs-2 to gauge liver damage. Results revealed significantly upregulated expression of Npy, Fkbp5, and Ppm1f in stressed mice. Conclusion: Our study identifies that chronic stress shows physical and molecular realizations. Additionally, this offers further incentive to look closely at Fkbp5, Npy, and Ppm1f under similar conditions and highlights their possible roles as markers of stress-induced damage.
DOI: 10.57760/sciencedb.34021
title: Lightweight Image Super-Resolution Network with Sparse and Permuted Self-Attention
title: 轻量级稀疏置换自注意力图像 超分辨率网络

description: The code implementation of the SPSANet proposed in the paper.
description: The code implementation of the SPSANet proposed in the paper.
DOI: 10.57760/sciencedb.34020
title: Active hydrogen migration path
title: Active hydrogen migration path

description:  The migration path of H- during the heating process was tracked. It was found that H- initially undergoes continuous hopping between In atoms. When the temperature rises to approximately 800 K, H- migrates from In to O atoms. Subsequently, it combines with a neighboring OH group to form H2O, and an exchange event occurs when it encounters another OH group also composed of H-
description:  The migration path of H- during the heating process was tracked. It was found that H- initially undergoes continuous hopping between In atoms. When the temperature rises to approximately 800 K, H- migrates from In to O atoms. Subsequently, it combines with a neighboring OH group to form H2O, and an exchange event occurs when it encounters another OH group also composed of H-
DOI: 10.6084/m9.figshare.30931340
title: Supplementary Material for: The relationships among the cardio-ankle vascular index values, proteinuria, and eGFR in diabetic and non-diabetic patients (the Coupling Registry)

description: Introduction: Chronic kidney disease (CKD) raises cardiovascular risk, but its link with the cardio ankle vascular index (CAVI) in diabetic and non diabetic patients remains unclear. The aim of this study was to clarify the relationships between CAVI values and an aspect of renal function.
Results: The proteinuria positivity rate differed significantly between the low- and high-CAVI groups, and the difference was significant even after adjusting for age, gender, and other factors. Although direct comparisons showed a higher proportion of CKD (eGFR &lt; 60 mL/min/1.73 m²) in the high CAVI group, this difference disappeared after adjustment. We further divided the low- and high-CAVI groups into diabetes mellitus (DM) and no diabetes mellitus (non-DM) subgroups to examine the rate of proteinuria positivity and the percentage of patients with eGFRs &lt;60 mL/min/1.73 m2. After the multivariate analysis adjustment, the odds ratios (ORs) for positive proteinuria the high-CAVI group were 1.58 (confidence interval [CI]: 1.07–2.34, p=0.022) for the non-DM subgroup and 0.88 (95%CI: 0.57–1.38, p=0.587) for the DM subgroup. The percentage of patients with eGFRs &lt;60 mL/min/1.73 m2 was not significantly different between the low- and high-CAVI groups in both the DM and non-DM subgroups after the multivariate analysis adjustment (p=0.088 for non-DM and p=0.135 for DM).
Conclusions: Proteinuria was associated with a CAVI ≥8 in patients without diabetes mellitus. High arterial stiffness may serve as a surrogate marker for renal damage in non diabetic patients.
DOI: 10.6084/m9.figshare.30931340.v1
title: Supplementary Material for: The relationships among the cardio-ankle vascular index values, proteinuria, and eGFR in diabetic and non-diabetic patients (the Coupling Registry)

description: Introduction: Chronic kidney disease (CKD) raises cardiovascular risk, but its link with the cardio ankle vascular index (CAVI) in diabetic and non diabetic patients remains unclear. The aim of this study was to clarify the relationships between CAVI values and an aspect of renal function.
Results: The proteinuria positivity rate differed significantly between the low- and high-CAVI groups, and the difference was significant even after adjusting for age, gender, and other factors. Although direct comparisons showed a higher proportion of CKD (eGFR &lt; 60 mL/min/1.73 m²) in the high CAVI group, this difference disappeared after adjustment. We further divided the low- and high-CAVI groups into diabetes mellitus (DM) and no diabetes mellitus (non-DM) subgroups to examine the rate of proteinuria positivity and the percentage of patients with eGFRs &lt;60 mL/min/1.73 m2. After the multivariate analysis adjustment, the odds ratios (ORs) for positive proteinuria the high-CAVI group were 1.58 (confidence interval [CI]: 1.07–2.34, p=0.022) for the non-DM subgroup and 0.88 (95%CI: 0.57–1.38, p=0.587) for the DM subgroup. The percentage of patients with eGFRs &lt;60 mL/min/1.73 m2 was not significantly different between the low- and high-CAVI groups in both the DM and non-DM subgroups after the multivariate analysis adjustment (p=0.088 for non-DM and p=0.135 for DM).
Conclusions: Proteinuria was associated with a CAVI ≥8 in patients without diabetes mellitus. High arterial stiffness may serve as a surrogate marker for renal damage in non diabetic patients.
DOI: 10.3535/wrp-6jy-7ty
title: Capsella bursa-pastoris (L.) Medik.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrp-94x-y19
title: Geum rivale L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrp-dfx-7y1
title: Calamagrostis epigejos (L.) Roth

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrp-lf5-g8z
title: Lycopodium clavatum L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.57760/sciencedb.34018
title: Associated Dataset for "Effects of Climate Change and Crop Management on Wheat Phenology in Arid Oasis Areas"
title: Associated Dataset for "Effects of Climate Change and Crop Management on Wheat Phenology in Arid Oasis Areas"

description: This dataset contains wheat phenology and yield observation data from 26 stations in oases of Xinjiang, China, during 1981–2021, associated with the paper "Impacts of Climate Change and Crop Management Practices on Wheat Phenology in Arid Oasis Regions". It includes three core sub-modules: 1) Meteorological parameters (mean, maximum, minimum daily temperature, precipitation, sunshine duration, averaged by phenological stages); 2) Wheat phenology (observation dates and durations of key stages including sowing, emergence, booting, flowering and maturity); 3) Yield data (yield per hectare from 19 winter wheat and 7 spring wheat stations over 40 years). All data have undergone field verification and quality control. This dataset is applicable for analyzing wheat phenology responses to climate change and evaluating crop management adaptability in arid oases, providing data support for regional sustainable agriculture.
description: This dataset contains wheat phenology and yield observation data from 26 stations in oases of Xinjiang, China, during 1981–2021, associated with the paper "Impacts of Climate Change and Crop Management Practices on Wheat Phenology in Arid Oasis Regions". It includes three core sub-modules: 1) Meteorological parameters (mean, maximum, minimum daily temperature, precipitation, sunshine duration, averaged by phenological stages); 2) Wheat phenology (observation dates and durations of key stages including sowing, emergence, booting, flowering and maturity); 3) Yield data (yield per hectare from 19 winter wheat and 7 spring wheat stations over 40 years). All data have undergone field verification and quality control. This dataset is applicable for analyzing wheat phenology responses to climate change and evaluating crop management adaptability in arid oases, providing data support for regional sustainable agriculture.
DOI: 10.6084/m9.figshare.30931346
title: Supplementary Material for: Case Report: No more Detours: Hepatopulmonary Shunt Reduction in a Patient with Hepatocellular Carcinoma After Treatment with Bevacizumab

description: Introduction: Treatment options for intermediate stage hepatocellular carcinoma (HCC) include transarterial radioembolization (TARE) and systemic treatment. Currently, in the absence of contraindications, first-line systemic therapies include combinations of immune checkpoint inhibitors (ICIs) with anti-angiogenic agents or different checkpoint inhibitors. Combinations of TARE and systemic treatment are being investigated for synergistic effects due to a boosting of the immune response. However, a high hepatopulmonary shunt (HPS) fraction - abnormal passage of blood from the hepatic vasculature to the pulmonary circulation resulting from the formation of abnormal vasculature within the tumor - precludes some patients from receiving TARE due to the risk of non-target lung radiation. Here, we present a case in which treatment of a patient with atezolizumab and bevacizumab led to a significant reduction in HPS, enabling locoregional treatment of the tumor while the tumor did not respond to systemic treatment alone according to the mRECIST criteria.
Case Presentation:
Here, we report the case of a patient with intermediate stage HCC who received systemic treatment with atezolizumab and bevacizumab due to a high hepatopulmonary shunt fraction of 42% precluding him from treatment with radioembolization. Despite eventually showing tumor progression to systemic treatment based on clinical and radiological evaluation, the lung shunt fraction was markedly reduced by the systemic treatment to only 3.4%, enabling successful treatment of the tumor with radioembolization.
Conclusion:
The anti-angiogenic effects of bevacizumab may reduce HPS in patients with intermediate-stage HCC, thereby extending the utility of TARE. In patients who do not respond to systemic treatment and who are amenable to treatment with TARE due to tumor stage, repeated measurements of HPSF might be considered after treatment with bevacizumab.
DOI: 10.3535/wrp-t9s-6w5
title: Tofieldia pusilla (Michx.) Pers.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrp-x8n-66c
title: Stellaria crassifolia Ehrh.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.6084/m9.figshare.30931346.v1
title: Supplementary Material for: Case Report: No more Detours: Hepatopulmonary Shunt Reduction in a Patient with Hepatocellular Carcinoma After Treatment with Bevacizumab

description: Introduction: Treatment options for intermediate stage hepatocellular carcinoma (HCC) include transarterial radioembolization (TARE) and systemic treatment. Currently, in the absence of contraindications, first-line systemic therapies include combinations of immune checkpoint inhibitors (ICIs) with anti-angiogenic agents or different checkpoint inhibitors. Combinations of TARE and systemic treatment are being investigated for synergistic effects due to a boosting of the immune response. However, a high hepatopulmonary shunt (HPS) fraction - abnormal passage of blood from the hepatic vasculature to the pulmonary circulation resulting from the formation of abnormal vasculature within the tumor - precludes some patients from receiving TARE due to the risk of non-target lung radiation. Here, we present a case in which treatment of a patient with atezolizumab and bevacizumab led to a significant reduction in HPS, enabling locoregional treatment of the tumor while the tumor did not respond to systemic treatment alone according to the mRECIST criteria.
Case Presentation:
Here, we report the case of a patient with intermediate stage HCC who received systemic treatment with atezolizumab and bevacizumab due to a high hepatopulmonary shunt fraction of 42% precluding him from treatment with radioembolization. Despite eventually showing tumor progression to systemic treatment based on clinical and radiological evaluation, the lung shunt fraction was markedly reduced by the systemic treatment to only 3.4%, enabling successful treatment of the tumor with radioembolization.
Conclusion:
The anti-angiogenic effects of bevacizumab may reduce HPS in patients with intermediate-stage HCC, thereby extending the utility of TARE. In patients who do not respond to systemic treatment and who are amenable to treatment with TARE due to tumor stage, repeated measurements of HPSF might be considered after treatment with bevacizumab.
DOI: 10.3535/wrp-xj2-k1n
title: Crataegus rhipidophylla Gand.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrp-xlp-9g1
title: Carex acuta L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrq-156-56p
title: Potentilla intermedia L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrq-1ts-rlp
title: Ruppia maritima L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrq-66n-4r6
title: Carex diandra Schrank

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrq-kgd-hsm
title: Eriophorum gracile Roth

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrq-lwt-7jq
title: Persicaria minor (Huds.) Opiz

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrp-d4w-gbt
title: Carex caryophyllea Latourr.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrq-tsf-9vv
title: Plantae

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.57760/sciencedb.j00124.00339
title: Effect of the mixing modes on the integrated process of co-pyrolysis of coal and biomass with CO2 reforming of methane to improve tar yield
title: Effect of the mixing modes on the integrated process of co-pyrolysis of coal and biomass with CO2 reforming of methane to improve tar yield

description: To investigate the influence of mixing modes on the integrated process of co-pyrolysis of coal and biomass with CO2 reforming of methane (CP-CRM), in this paper, Naomaohu coal (NMH) and elm (ELM) were chosen and three mixing modes (NMH/ELM, ELM/NMH and Blends) were examined over Ni-based reforming catalysts prepared by ball milling, and compared with the co-pyrolysis under N2 atmosphere (CP-N2). The results showed that the products distribution was significantly affected by the mixing mode. Tar yield during CP-CRM under Blends model was higher than those of NMH/ELM and ELM/NMH, increasing by 35.29% compared with CP-N2. Meanwhile, light oil content in the tar was higher than those of NMH/ELM and ELM/NMH, and the pitch content was lower than those of NMH/ELM and ELM/NMH. The phenols content in tar from Blends model was 19.52% higher than that of CP-N2, along with more free radicals in tar than that of CP-N2, which was mainly ascribed to the enhanced heat and mass transfer between raw material particles by mechanical mixing, making the co-pyrolysis process more complete. At the same time, the mechanical mixing was conducive to more efficient action of hydrogen-rich free radicals (such as •H, •CHx) on pyrolysis products, suppressing the secondary cracking and polymerization. The results provide a good guidance for regulating tar yield and compositions of the co-pyrolysis process.
description: To investigate the influence of mixing modes on the integrated process of co-pyrolysis of coal and biomass with CO2 reforming of methane (CP-CRM), in this paper, Naomaohu coal (NMH) and elm (ELM) were chosen and three mixing modes (NMH/ELM, ELM/NMH and Blends) were examined over Ni-based reforming catalysts prepared by ball milling, and compared with the co-pyrolysis under N2 atmosphere (CP-N2). The results showed that the products distribution was significantly affected by the mixing mode. Tar yield during CP-CRM under Blends model was higher than those of NMH/ELM and ELM/NMH, increasing by 35.29% compared with CP-N2. Meanwhile, light oil content in the tar was higher than those of NMH/ELM and ELM/NMH, and the pitch content was lower than those of NMH/ELM and ELM/NMH. The phenols content in tar from Blends model was 19.52% higher than that of CP-N2, along with more free radicals in tar than that of CP-N2, which was mainly ascribed to the enhanced heat and mass transfer between raw material particles by mechanical mixing, making the co-pyrolysis process more complete. At the same time, the mechanical mixing was conducive to more efficient action of hydrogen-rich free radicals (such as •H, •CHx) on pyrolysis products, suppressing the secondary cracking and polymerization. The results provide a good guidance for regulating tar yield and compositions of the co-pyrolysis process.
DOI: 10.3535/wrp-e7m-v2n
title: Vahlodea atropurpurea (Wahlenb.) Fr.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrq-vk7-zyf
title: Dianthus barbatus L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrq-wmk-g3e
title: Agrostis canina L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrq-x4d-gtn
title: Dactylorhiza incarnata subsp. cruenta (O.F.Müll.) P.D.Sell

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrq-xpz-095
title: Cardamine amara L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrq-ze5-y4g
title: Poa trivialis L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrr-gyb-tfm
title: Stratiotes aloides L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrr-x8l-lre
title: Triglochin palustris L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrr-xt0-03y
title: Luzula sudetica (Willd.) Schult.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrs-5ah-zzs
title: Carex flava × viridula x flava × viridula var. bergrothii

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.57760/sciencedb.34028
title: A NUMERICAL STUDY OF THE EFFECTS OF DENSITY CONTRAST ON FLOW, TURBULENCE AND MIXING AT THE Negro/Solimoes confluence, BraZil
title: A NUMERICAL STUDY OF THE EFFECTS OF DENSITY CONTRAST ON FLOW, TURBULENCE AND MIXING AT THE Negro/Solimoes confluence, BraZil

description: This dataset contains results from eddy-resolving numerical simulations, which are conducted to investigate the effects of density contrast between the confluent flows on hydrodynamics, coherent structures and mixing downstream of the confluence between the Negro and Solimões Rivers, Brazil
description: This dataset contains results from eddy-resolving numerical simulations, which are conducted to investigate the effects of density contrast between the confluent flows on hydrodynamics, coherent structures and mixing downstream of the confluence between the Negro and Solimões Rivers, Brazil
DOI: 10.3535/wrs-71b-0dy
title: Arabidopsis × suecica (Fr.) Norrl.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrs-ccj-rfq
title: Phleum alpinum L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrs-f7k-pnn
title: Alnus glutinosa f. minutifolia

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrs-l95-4hs
title: Hordeum jubatum L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.57760/sciencedb.xbyxb.00142
title: Genetic deletion of LOX-1 attenuates metabolic dysfunction-associated steatohepatitis in mice
title: Genetic deletion of LOX-1 attenuates metabolic dysfunction-associated steatohepatitis in mice

description: Supplement table1:The DNA was extracted from the mouse tail and amplified by PCR. The PCR reaction system included DNA, primers, 2×Taq premix and ddH2O, and the amplified products were subjected to agarose gel electrophoresis for visualization and image acquisition. Primer sequences for PCR were listed in Supplement Table 1.Supplement table2:Total RNA was extracted from the liver tissues of mice or LX-2 cells using RNAquick Purification Kit (Shanghai Yishan Biotechnology, Shanghai, China) as described by the manufacturer. cDNA synthesis was carried out with HiScript Ⅱ Q Select RT SuperMix for qPCR (Vazyme). Quantitative PCR was performed in technical triplicates using SYBR Green reagent (Vazyme). The level of β-actin or GAPDH RNA expression was used to normalize the data. Primer sequences for RT-qPCR were listed in Supplement Table 2.Supplement table3:Gene functional annotation of LOX-1-related MASH targets.
description: Supplement table1:The DNA was extracted from the mouse tail and amplified by PCR. The PCR reaction system included DNA, primers, 2×Taq premix and ddH2O, and the amplified products were subjected to agarose gel electrophoresis for visualization and image acquisition. Primer sequences for PCR were listed in Supplement Table 1.Supplement table2:Total RNA was extracted from the liver tissues of mice or LX-2 cells using RNAquick Purification Kit (Shanghai Yishan Biotechnology, Shanghai, China) as described by the manufacturer. cDNA synthesis was carried out with HiScript Ⅱ Q Select RT SuperMix for qPCR (Vazyme). Quantitative PCR was performed in technical triplicates using SYBR Green reagent (Vazyme). The level of β-actin or GAPDH RNA expression was used to normalize the data. Primer sequences for RT-qPCR were listed in Supplement Table 2.Supplement table3:Gene functional annotation of LOX-1-related MASH targets.
DOI: 10.3535/wrr-b9r-stf
title: Rumex acetosella L.

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.
DOI: 10.3535/wrr-y59-c48
title: Deschampsia cespitosa subsp. cespitosa

description: Digital Specimen for the physical specimen hosted at Finnish Museum of Natural History.