cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26996733
title: Additional file 7 of Diversity, composition and potential roles of sedimentary microbial communities in different coastal substrates around subtropical Okinawa Island, Japan

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.26996733.v1
title: Additional file 7 of Diversity, composition and potential roles of sedimentary microbial communities in different coastal substrates around subtropical Okinawa Island, Japan

description: Supplementary Material 7
DOI: 10.6084/m9.figshare.26996739.v1
title: Additional file 9 of Diversity, composition and potential roles of sedimentary microbial communities in different coastal substrates around subtropical Okinawa Island, Japan

description: Supplementary Material 9
DOI: 10.6084/m9.figshare.26996742
title: Additional file 10 of Diversity, composition and potential roles of sedimentary microbial communities in different coastal substrates around subtropical Okinawa Island, Japan

description: Supplementary Material 10
DOI: 10.6084/m9.figshare.26996742.v1
title: Additional file 10 of Diversity, composition and potential roles of sedimentary microbial communities in different coastal substrates around subtropical Okinawa Island, Japan

description: Supplementary Material 10
DOI: 10.6084/m9.figshare.26996787
title: Additional file 2 of Factors influencing patient experience in hospital wards: a systematic review

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26996787.v1
title: Additional file 2 of Factors influencing patient experience in hospital wards: a systematic review

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26996799
title: Additional file 1 of Few chemoreceptor genes in the ambrosia beetle Trypodendron lineatum may reflect its specialized ecology

description: Additional file 1. Amino acid sequences and annotation details of the chemosensory genes identified in the genome of Trypodendron lineatum. Information on genomic location, gene structure, presence in antennal transcriptome, and protein length is presented alongside relevant annotation notes.
DOI: 10.6084/m9.figshare.26996802
title: Additional file 2 of Few chemoreceptor genes in the ambrosia beetle Trypodendron lineatum may reflect its specialized ecology

description: Additional file 2. The observed simple (1:1) orthologous relationships between chemoreceptors across the analysed species (Trypodendron lineatum, Dendroctonus ponderosae, Hypothenemus hampei, and Anoplophora glabripennis).
DOI: 10.6084/m9.figshare.26996799.v1
title: Additional file 1 of Few chemoreceptor genes in the ambrosia beetle Trypodendron lineatum may reflect its specialized ecology

description: Additional file 1. Amino acid sequences and annotation details of the chemosensory genes identified in the genome of Trypodendron lineatum. Information on genomic location, gene structure, presence in antennal transcriptome, and protein length is presented alongside relevant annotation notes.
DOI: 10.6084/m9.figshare.26996811.v1
title: Additional file 3 of Genetic diversity and signatures of selection in Icelandic horses and Exmoor ponies

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26996826
title: Additional file 2 of Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

description: Additional file 2. Supplementary table S1.
DOI: 10.6084/m9.figshare.26996826.v1
title: Additional file 2 of Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

description: Additional file 2. Supplementary table S1.
DOI: 10.6084/m9.figshare.26996829.v1
title: Additional file 3 of Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

description: Additional file 3. Supplementary table S2.
DOI: 10.6084/m9.figshare.26996832.v1
title: Additional file 4 of Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

description: Additional file 4. Supplementary table S3.
DOI: 10.6084/m9.figshare.26996832
title: Additional file 4 of Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

description: Additional file 4. Supplementary table S3.
DOI: 10.6084/m9.figshare.26996841
title: Additional file 7 of Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

description: Additional file 7. Supplementary table S4.
DOI: 10.6084/m9.figshare.26996841.v1
title: Additional file 7 of Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

description: Additional file 7. Supplementary table S4.
DOI: 10.6084/m9.figshare.26996844
title: Additional file 8 of Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

description: Additional file 8. Supplementary table S5.
DOI: 10.6084/m9.figshare.26996844.v1
title: Additional file 8 of Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

description: Additional file 8. Supplementary table S5.
DOI: 10.6084/m9.figshare.26996850
title: Additional file 10 of Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

description: Additional file 10. Supplementary table S6.
DOI: 10.6084/m9.figshare.26996856
title: Additional file 12 of Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

description: Additional file 12. TF_network.cys.
DOI: 10.6084/m9.figshare.26996859.v1
title: Additional file 13 of Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm

description: Additional file 13. Supplementary table S7.
DOI: 10.6084/m9.figshare.26758892.v1
title: Additional file 3 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 3: Table S3. Hybrid de novo transcriptome assembly. Summary of sequences generated by RNAspades using pre-processed Illumina PE short-reads and super-accuracy basecalled ONT long-reads. Summary of DESeq2 and EdgeR output tables for differentially expressed potential gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758901.v1
title: Additional file 6 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 6: Table S6. Summary of differentially expressed genes (Oocyte - Germinal Vesicle vs. Blastocyst). Summary of output tables of DESeq2 and EdgeR for differentially expressed potential novel gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758886
title: Additional file 1 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 1: Table S1. Table with oligonucleotide sequences. Table with oligonucleotide sequences used in this study.
DOI: 10.6084/m9.figshare.26758901
title: Additional file 6 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 6: Table S6. Summary of differentially expressed genes (Oocyte - Germinal Vesicle vs. Blastocyst). Summary of output tables of DESeq2 and EdgeR for differentially expressed potential novel gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758925
title: Additional file 14 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 14: Table S14. Embryo developmental rates for CRISPR-Cas9D10 targeting ENSBTAG00000068261 in scramble controls and genome-edited samples. Description of data: Embryo developmental rates for CRISPR-Cas9D10 targeting ENSBTAG00000068261 in scramble controls and genome-edited samples. hpf: hours post fertilization; %: percentage of embryos relative putative zygotes; SD: standard deviation.
DOI: 10.6084/m9.figshare.26758886.v1
title: Additional file 1 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 1: Table S1. Table with oligonucleotide sequences. Table with oligonucleotide sequences used in this study.
DOI: 10.6084/m9.figshare.26758889
title: Additional file 2 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 2: Table S2. Pre-processing RNA-seq short-reads samples summary. Number of paired-end reads per sample and the total number of pre-processed reads used in de novo assembly.
DOI: 10.6084/m9.figshare.26758889.v1
title: Additional file 2 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 2: Table S2. Pre-processing RNA-seq short-reads samples summary. Number of paired-end reads per sample and the total number of pre-processed reads used in de novo assembly.
DOI: 10.6084/m9.figshare.26758892
title: Additional file 3 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 3: Table S3. Hybrid de novo transcriptome assembly. Summary of sequences generated by RNAspades using pre-processed Illumina PE short-reads and super-accuracy basecalled ONT long-reads. Summary of DESeq2 and EdgeR output tables for differentially expressed potential gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758895
title: Additional file 4 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 4: Table S4. Summary of differentially expressed genes (Oocyte - Germinal Vesicle vs. Oocyte - Metaphase II). Summary of DESeq2 and EdgeR output tables for differentially expressed potential gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758898
title: Additional file 5 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 5: Table S5. Summary of differentially expressed genes (Oocyte - Germinal Vesicle vs. Eight-cell). Summary of DESeq2 and EdgeR output tables for differentially expressed potential gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758898.v1
title: Additional file 5 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 5: Table S5. Summary of differentially expressed genes (Oocyte - Germinal Vesicle vs. Eight-cell). Summary of DESeq2 and EdgeR output tables for differentially expressed potential gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758904
title: Additional file 7 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 7: Table S7. Summary of differentially expressed genes (Oocyte - Metaphase II vs. Eight-cell). Summary of DESeq2 and EdgeR output tables for differentially expressed potential gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758904.v1
title: Additional file 7 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 7: Table S7. Summary of differentially expressed genes (Oocyte - Metaphase II vs. Eight-cell). Summary of DESeq2 and EdgeR output tables for differentially expressed potential gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758907
title: Additional file 8 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 8: Table S8. Summary of differentially expressed genes (Oocyte - Metaphase II vs. Blastocyst). Summary of DESeq2 and EdgeR output tables for differentially expressed potential gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758907.v1
title: Additional file 8 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 8: Table S8. Summary of differentially expressed genes (Oocyte - Metaphase II vs. Blastocyst). Summary of DESeq2 and EdgeR output tables for differentially expressed potential gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758910
title: Additional file 9 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Addditional file 9: Table S9. Summary of differentially expressed genes (Eight-cell vs. Blastocyst). Summary of DESeq2 and EdgeR output tables for differentially expressed potential gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758910.v1
title: Additional file 9 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Addditional file 9: Table S9. Summary of differentially expressed genes (Eight-cell vs. Blastocyst). Summary of DESeq2 and EdgeR output tables for differentially expressed potential gene loci and reference novel gene loci.
DOI: 10.6084/m9.figshare.26758913
title: Additional file 10 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 10: Table S10. Summary of co-expression (Eight-cell). Table retrieved from the co-expression matrix of DE novel genes/potential novel genes with annotated genes (|r| ≥0.85 and p-value ≤ 0.05) in eight-cell samples that followed pattern #3 and #4 (Fig. 3).
DOI: 10.6084/m9.figshare.26758913.v1
title: Additional file 10 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 10: Table S10. Summary of co-expression (Eight-cell). Table retrieved from the co-expression matrix of DE novel genes/potential novel genes with annotated genes (|r| ≥0.85 and p-value ≤ 0.05) in eight-cell samples that followed pattern #3 and #4 (Fig. 3).
DOI: 10.6084/m9.figshare.26758916
title: Additional file 11 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 11: Table S11. Summary of co-expression (Blastocyst). Table retrieved from the co-expression matrix of DE novel genes/potential novel genes with annotated genes (|r| ≥0.85 and p-value ≤ 0.05) in blastocyst samples that followed pattern #3 and #4 (Fig. 3).
DOI: 10.6084/m9.figshare.26758919
title: Additional file 12 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 12: Table S12. Summary of the functional enrichment (Eight-cell). Table retrieved from functional enrichment of co-expressed annotated genes (|r| ≥0.85 and p-value ≤ 0.05) with DE genes in Eight-cell samples that followed the pattern #3 and #4 (Fig. 3).
DOI: 10.6084/m9.figshare.26758919.v1
title: Additional file 12 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 12: Table S12. Summary of the functional enrichment (Eight-cell). Table retrieved from functional enrichment of co-expressed annotated genes (|r| ≥0.85 and p-value ≤ 0.05) with DE genes in Eight-cell samples that followed the pattern #3 and #4 (Fig. 3).
DOI: 10.6084/m9.figshare.26758922
title: Additional file 13 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 13: Table S13. Summary of the functional enrichment (Blastocyst). Table retrieved from functional enrichment of co-expressed annotated genes (|r| ≥0.85 and p-value ≤ 0.05) with DE genes in blastocyst samples that followed the pattern #3 and #4 (Fig. 3).
DOI: 10.6084/m9.figshare.26758916.v1
title: Additional file 11 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 11: Table S11. Summary of co-expression (Blastocyst). Table retrieved from the co-expression matrix of DE novel genes/potential novel genes with annotated genes (|r| ≥0.85 and p-value ≤ 0.05) in blastocyst samples that followed pattern #3 and #4 (Fig. 3).
DOI: 10.6084/m9.figshare.26758922.v1
title: Additional file 13 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 13: Table S13. Summary of the functional enrichment (Blastocyst). Table retrieved from functional enrichment of co-expressed annotated genes (|r| ≥0.85 and p-value ≤ 0.05) with DE genes in blastocyst samples that followed the pattern #3 and #4 (Fig. 3).
DOI: 10.6084/m9.figshare.26758925.v1
title: Additional file 14 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 14: Table S14. Embryo developmental rates for CRISPR-Cas9D10 targeting ENSBTAG00000068261 in scramble controls and genome-edited samples. Description of data: Embryo developmental rates for CRISPR-Cas9D10 targeting ENSBTAG00000068261 in scramble controls and genome-edited samples. hpf: hours post fertilization; %: percentage of embryos relative putative zygotes; SD: standard deviation.
DOI: 10.6084/m9.figshare.26758928
title: Additional file 15 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 15: Table S15. Contrasts between scramble controls and genome-edited groups for blastocyst yield at 168hpf. Contrasts between scramble controls and genome-edited groups for blastocyst yield at 168hpf. SE: standard error; DF: degrees of freedom; adj p-value: Bonferroni corrected p-values.
DOI: 10.6084/m9.figshare.26758928.v1
title: Additional file 15 of Identification of novel cattle (Bos taurus) genes and biological insights of their function in pre-implantation embryo development

description: Additional file 15: Table S15. Contrasts between scramble controls and genome-edited groups for blastocyst yield at 168hpf. Contrasts between scramble controls and genome-edited groups for blastocyst yield at 168hpf. SE: standard error; DF: degrees of freedom; adj p-value: Bonferroni corrected p-values.
DOI: 10.6084/m9.figshare.26996871
title: Additional file 1 of The symbiotic alga Trebouxia fuels a coherent soil ecosystem on the landscape scale in the Atacama Desert

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.26996871.v1
title: Additional file 1 of The symbiotic alga Trebouxia fuels a coherent soil ecosystem on the landscape scale in the Atacama Desert

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.26996877
title: Additional file 2 of Building shape-focused pharmacophore models for effective docking screening

description: Additional file2
DOI: 10.6084/m9.figshare.26996877.v1
title: Additional file 2 of Building shape-focused pharmacophore models for effective docking screening

description: Additional file2
DOI: 10.6084/m9.figshare.26996883
title: Additional file 1 of Insights into the ANKRD11 variants and short-stature phenotype through literature review and ClinVar database search

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26996889
title: Additional file 3 of Insights into the ANKRD11 variants and short-stature phenotype through literature review and ClinVar database search

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26996889.v1
title: Additional file 3 of Insights into the ANKRD11 variants and short-stature phenotype through literature review and ClinVar database search

description: Supplementary Material 3
DOI: 10.15468/dl.hp5qsq
title: Occurrence Download

description: A dataset containing 403959006 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Ruprechtia apetala Wedd., Ruprechtia coriacea (H.Karst.) S.F.Blake, Ruprechtia fusca Fernald, Ruprechtia laxiflora Meisn., Ruprechtia ramiflora (Jacq.) C.A.Mey., Ruprechtia tangarana Standl., Ruprechtia tenuiflora Benth., Ruprechtia triflora Griseb., Tracheophyta, Triplaris cumingiana Fisch. & C.A.Mey. ex C.A.Mey., Triplaris gardneriana Wedd., Triplaris melaenodendron (Bertol.) Standl. & Steyerm., Triplaris peruviana Fisch. & C.A.Mey. ex C.A.Mey., Triplaris poeppigiana Wedd., Triplaris weigeltiana (Rchb.) Kuntze)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 {
 "or" : [
 {
 "not" : {
 "EstablishmentMeans" : [
 "is one of (MANAGED, INTRODUCED)"
 ]
 }
 },
 "EstablishmentMeans is null"
 ]
 }
 ]
}

 The dataset includes 403959006 records from 12882 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011690-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.48597/x2yy-ctpy
title: Measurement of Chromium at Monte Martano

description: Measurement of Chromium at Monte Martano
DOI: 10.48597/x6u3-7cny
title: Measurement of Lanthanum at Monte Martano

description: Measurement of Lanthanum at Monte Martano
DOI: 10.48597/xcsu-yhbr
title: Measurement of Vanadium at Monte Martano

description: Measurement of Vanadium at Monte Martano
DOI: 10.48597/xdqh-k7y4
title: Measurement of Vanadium at Monte Martano

description: Measurement of Vanadium at Monte Martano
DOI: 10.48597/xqw5-p4b9
title: Measurement of Inorganics in air and particle phase at Zeppelin mountain (Ny-Ålesund)

description: Measurement of Inorganics in air and particle phase at Zeppelin mountain (Ny-Ålesund)
DOI: 10.48597/xreg-4y2p
title: Measurement of Nitrogen_monoxide at Jungfraujoch

description: Measurement of Nitrogen_monoxide at Jungfraujoch
DOI: 10.48597/xsge-dzhh
title: Measurement of Iron at Monte Martano

description: Measurement of Iron at Monte Martano
DOI: 10.48597/yfrh-r4z9
title: Measurement of Inorganics in air and particle phase and ozone at Aliartos

description: Measurement of Inorganics in air and particle phase and ozone at Aliartos
DOI: 10.48597/ygd9-6878
title: Measurement of Nickel at Monte Martano

description: Measurement of Nickel at Monte Martano
DOI: 10.48597/yrg2-vmvy
title: Measurement of Sulphate_corrected at Tustervatn

description: Measurement of Sulphate_corrected at Tustervatn
DOI: 10.48597/yrwy-cs4d
title: Measurement of Precipitation_amount at Hurdal

description: Measurement of Precipitation_amount at Hurdal
DOI: 10.48597/z94m-fc72
title: Measurement of Inorganics in air and particle phase at Kårvatn

description: Measurement of Inorganics in air and particle phase at Kårvatn
DOI: 10.48597/zf4f-sapr
title: Measurement of Inorganics in precipitation at Tustervatn

description: Measurement of Inorganics in precipitation at Tustervatn
DOI: 10.48597/zwrz-3k84
title: Measurement of Tin at Monte Martano

description: Measurement of Tin at Monte Martano