cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/yrdhjh37ym.1
title: Local ecological knowledge and perception

description: Understanding how socio-ecological variables influence Local Ecological Knowledge (LEK) and perceptions of ecosystem services among farmers near protected areas is crucial for designing effective biodiversity conservation initiatives. We used participatory methodologies with 80 farmers from agrarian settlements in the Cerrado biome, Brazil, to quantify LEK and assess ecosystem service perceptions via an adapted Q-methodology. Data on thirteen socio-ecological variables, including age, gender, farm size, education, conservation engagement, and interactions with protected areas, were collected. Using a Random Forest (RF) modelling approach, we identified the most influential variables on LEK and perceptions.Interviews were approved by the Ethics Committee of the University of Brasília (CAAE: 30574620000005540). LEK scores were based on detailed information about species, ecosystems, and conservation actions. Scores ranged from 0 to 60, with a maximum of 62 points for exceptional details. We assessed ecosystem service perceptions using the CICES 5.2 classification, selecting 13 services from regulation, provision, and cultural classes. Data were collected using a Q-sort table ranging from -5 (extremely negative) to 5 (extremely positive), and scores from 0 (not noticed) to 5 (extremely important) were assigned.To understand changes in ecosystem services, we included open-ended questions about perceived landscape changes, specific changes, and future factors affecting ecosystem services. Using RF modelling, we evaluated the variability of socio-ecological variables associated with LEK and perceptions. ANOVA and Tukey's post-hoc test assessed significant variations, while the Kruskal-Wallis test and Dunn's test analyzed non-parametric data.We also explored how LEK and ecosystem service perceptions varied among different farmer types, classifying farms into: (1) self-consumption, (2) soybean monoculture, (3) ecotourism, (4) animal production in silvopastoral systems, and (5) agroecological farms. A descriptive analysis highlighted the contribution of each socio-ecological variable to LEK and perceptions. Principal Component Analysis (PCA) was used to assess variations in LEK and ecosystem service perceptions.
DOI: 10.17632/xssh7963jv.1
title: Dataset for meta-analysis on body weight supported gait training for mobility and quality of life in adults with non-progressive brain injuries

description: Question: What are the effects and harms associated with bodyweight-supported (BWS) gait training in adults with acquired and congenital brain injuries (ABI and CBI) according to measures of mobility, health-related quality of life (HRQoL), and adverse events?

Design: Systematic review and meta-analysis of randomised controlled trials.

Participants: Adults with ABI and CBI.

Intervention: BWS gait training compared to any type of other intervention.

Outcome measures: Gait function, walking speed, walking capacity, gait pathology, HRQoL, withdrawals, adverse events, serious adverse events.

Results: A total of 99 studies (5,150 participants) were identified for inclusion. Compared with control conditions, BWS gait training improved gait function (2.28 units [0–24 point scale] on the Dynamic Gait Index [95% CI, 1.30, 3.22]), walking speed (0.27 m/s on the 10-meter walk test [95% CI, 0.17, 0.37]), walking capacity (27.71 meters on the 6-minute walk test [95% CI, 8.91, 48.51]), gait pathology (4.99 degrees [0–100 degree scale] on the Gait Profile Score [95% CI, 3.08, 6.86]), and HRQoL (3.74 units [0–100 unit scale] on Short Form 36 Physical Component [95% CI, 0.80, 6.68]). No adverse effects related to BWS were identified.

Conclusion: BWS gait training appears to be safe and has a positive effect on measures of mobility and HRQoL in adults with nonprogressive ABI and CBI. The certainty of evidence was low to very low. Subgroup analyses indicated that the magnitude of the effect depends on the type of unloading mechanism used when employing BWS.

Trial registration: PROSPERO (CRD42021282642)
DOI: 10.17632/n8x6nrkg2y.1
title: Ferrous-oxidizing bacteria: The potential on enhancing the electrochemical characteristics and performance of a neutral all-iron flow battery. Sitao Li et al.

description: The raw data of microbial community analysis.
DOI: 10.17632/2nw7xynr2n.1
title: LINF_030009400

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/s46wtytsgg.1
title: LINF_040014300

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.5519/qd.6n8svjw4
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (50 records)
DOI: 10.17632/2fhb7rdmy8.1
title: LINF_040015100

description: Chloride channel protein | VCL1; Leishmania infantum (strain JPCM5)
DOI: 10.17632/tmp5ry5sz8.3
title: Intrinsic Adaptive Plasticity in Mouse and Human Sensory Neurons

description: Here, we show that sustained depolarization (induced by 24h incubation in 30mM KCl) induces compensatory changes that decrease excitability of mouse and human sensory neurons without directly opposing membrane depolarization. Voltage clamp recordings show that sustained depolarization produces no significant alteration in voltage-gated potassium currents, but a robust reduction in voltage-gated sodium currents, likely contributing to the overall decrease in neuronal excitability. The compensatory decrease in neuronal excitability and reduction in voltage-gated sodium currents reversed completely following a 24h recovery period in normal medium. Similar adaptive changes were not observed in response to 24h of sustained action potential firing induced by optogenetic stimulation at 1Hz, indicating the need for prolonged depolarization to drive engagement of this adaptive mechanism in sensory neurons. Our findings show that mouse and human sensory neurons are capable of engaging adaptive mechanisms to regulate intrinsic excitability in response to sustained depolarization in a manner similar to that described in neurons in the central nervous system. 

The data listed here show a description of the electrophysiological analysis of mouse and human sensory neurons subjected to sustained depolarization. In addition, you will find results from immunocytochemistry and cell viability assays. The data listed here also includes statistical analysis generated by Graphpad. Please refer to our manuscript for further description. 

The link to the RNAseq dataset is listed below
DOI: 10.15161/oar.it/143284
title: Carta Geologica d'Italia alla scala 1:50.000, F. 607 Corleone

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.15161/oar.it/143285
title: Carta Geologica d'Italia alla scala 1:50.000, F. 607 Corleone

description: Foglio geologico alla scala 1:50.000 basato su rilevamenti alla scala 1:10.000 comprensivo di legenda, schemi a cornice, sezioni geologiche.
DOI: 10.17632/v7gz9cvjbz.1
title: LINF_030009500

description: Hypothetical protein - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.x6nykz
title: Occurrence Download

description: A dataset containing 75983 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (South Africa, Lesotho, Eswatini)",
 "TaxonKey is one of (Amblyospiza albifrons (Vigors, 1831))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 75983 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004442-250117142028555/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/vysnsrsmrx.1
title: E. coli from Poultry and Dairy in Bangladesh

description: Data related to E. coli isolated from Poultry and Dairy
DOI: 10.17632/tvbzj29vjn.1
title: Designing a video-based learning environment using workflow and scaffolding to enhance the ability to create instructional videos

description: A video-based learning environment using workflow and scaffolding to enhance the ability to create instructional videos
DOI: 10.17632/5kbx9p25fs.1
title: Variations of Zn isotopes in phosphorites and their implications

description: Major, trace, and rare earth elements (whole rock and CFA mineral), as well as Zinc isotope data from Cenozoic phosphorites (samples taken from California Borderland, Chatham Rise, Blake Plateau, Peru Margin, and open-ocean seamounts phosphorites) and Permian phosphorites (samples taken from Meade Peak Member and Retort member phosphorites of the Permian Phosphoria Formation).
DOI: 10.17632/ycbkk26tnd.1
title: Climate vulnerability: Age at death and temporal trends in mortality from infectious diseases in Poznań, 1854-1874

description: This research was funded in whole by the National Science Centre, Poland [UMO-2021/41/B/HS3/00594]. For the purpose of Open Access, the author has applied a CC-BY public copyright licence to any Author Accepted Manuscript (AAM) version arising from this submission.
DOI: 10.17632/wyng6rfzdr.1
title: LINF_360063800

description: selenophosphate synthetase | SPS2 | SELD
Leishmania infantum (strain JPCM5)
DOI: 10.17632/ck366d84rt.1
title: LINF_360064300

description: L-2-hydroxyglutarate dehydrogenase - mitochondrial
Leishmania infantum (strain JPCM5)
DOI: 10.17632/c66jczxfjc.4
title: ySKILLS three-wave survey

description: This dataset provides longitudinal survey data from an European project ySKILLS centered on the role of digital skills in youth's development. It contains survey data from 10,821 children from grades 6-10 (in Wave 1) in six European countries: Estonia, Finland, Germany, Italy, Poland, and Portugal. The data have been collected in three waves between Spring 2021 and Spring 2023, the children were recruited through schools where the data collection also took place. An exception were online data collections due to restrictions caused by COVID-19. The dataset is novel in its multidimensional approach to the construct of digital skills and digital literacy. It provides insight into the development of digital skills in youth and the role of digital skills in youth’s positive and negative online experiences and wellbeing. It also contains data allowing analysis of the role of digital skills in class networks. The data are beneficial for researchers interested in examination of youth’s online skills, online experiences, and wellbeing from a longitudinal perspective.
DOI: 10.17632/zf8zx5w2sc.1
title: LINF_360064400

description: Guanylyl cyclase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/c66jczxfjc.1
title: ySKILLS three-wave survey

description: This dataset provides longitudinal survey data from an European project ySKILLS centered on the role of digital skills in youth's development. It contains survey data from 10,821 children from grades 6-10 (in Wave 1) in six European countries: Estonia, Finland, Germany, Italy, Poland, and Portugal. The data have been collected in three waves between Spring 2021 and Spring 2023, the children were recruited through schools where the data collection also took place. An exception were online data collections due to restrictions caused by COVID-19. The dataset is novel in its multidimensional approach to the construct of digital skills and digital literacy. It provides insight into the development of digital skills in youth and the role of digital skills in youth’s positive and negative online experiences and wellbeing. It also contains data allowing analysis of the role of digital skills in class networks. The data are beneficial for researchers interested in examination of youth’s online skills, online experiences, and wellbeing from a longitudinal perspective.
DOI: 10.17632/c66jczxfjc.3
title: ySKILLS three-wave survey

description: This dataset provides longitudinal survey data from an European project ySKILLS centered on the role of digital skills in youth's development. It contains survey data from 10,821 children from grades 6-10 (in Wave 1) in six European countries: Estonia, Finland, Germany, Italy, Poland, and Portugal. The data have been collected in three waves between Spring 2021 and Spring 2023, the children were recruited through schools where the data collection also took place. An exception were online data collections due to restrictions caused by COVID-19. The dataset is novel in its multidimensional approach to the construct of digital skills and digital literacy. It provides insight into the development of digital skills in youth and the role of digital skills in youth’s positive and negative online experiences and wellbeing. It also contains data allowing analysis of the role of digital skills in class networks. The data are beneficial for researchers interested in examination of youth’s online skills, online experiences, and wellbeing from a longitudinal perspective.
DOI: 10.17632/c66jczxfjc.2
title: ySKILLS three-wave survey

description: This dataset provides longitudinal survey data from an European project ySKILLS centered on the role of digital skills in youth's development. It contains survey data from 10,821 children from grades 6-10 (in Wave 1) in six European countries: Estonia, Finland, Germany, Italy, Poland, and Portugal. The data have been collected in three waves between Spring 2021 and Spring 2023, the children were recruited through schools where the data collection also took place. An exception were online data collections due to restrictions caused by COVID-19. The dataset is novel in its multidimensional approach to the construct of digital skills and digital literacy. It provides insight into the development of digital skills in youth and the role of digital skills in youth’s positive and negative online experiences and wellbeing. It also contains data allowing analysis of the role of digital skills in class networks. The data are beneficial for researchers interested in examination of youth’s online skills, online experiences, and wellbeing from a longitudinal perspective.
DOI: 10.17632/7jf46k3n52.1
title: Data from: Consistent dear enemy effect despite variation in territorial centrality and population density in Rufous Horneros

description: Data and R codes corresponding to the article: 
Amorim, PS, Guaraldo, AC, Diniz, P. Consistent dear enemy effect despite variation in territorial centrality and population density in Rufous Horneros. http://dx.doi.org/10.1080/01584197.2024.2362984
DOI: 10.17632/72h228rp33.2
title: HINT1 gene polymorphisms rs3864236, rs2526303, rs2551038, and personality traits measured by NEO-FFI and STAI in a group of cigarette users and never-smokers.

description: The dataset includes 522 participants (371 cigarette users and 151 never-smokers) with their age, sex and smoking status. 
Both cigarette users and controls were examined using the NEO Five-Factor Personality Inventory (NEO-FFI) and the State-Trait Anxiety Inventory (STAI). NEO-FFI analyses five traits - neuroticism, extroversion, openness to experience, agreeableness, and conscientiousness. STAI measures anxiety as a trait and as a state. The results of NEO-FFI and STAI were expressed as sten scores. The conversion of the raw score to the sten scale was conducted by the Polish standards for adults, with a sten value of 0-3 corresponding to low results, 4–6 corresponding to average results and 7–10 corresponding to high results.
The histidine triad nucleotide-binding protein (HINT1) gene's three polymorphic sites were genotyped: rs3864236, rs2526303, and rs2551038.
DOI: 10.17632/9hzbwwzsm8.1
title: Response of Girgir (Eruca sativa L.) to Plant Density and blended NPS fertilizer

description: Field experimen consisted of five blended NPS fertilizer rates (0, 50,100, 150, and 200 kg ha-1) and three inter spacing (10, 20 and 30cm) of girgir crop with the objective of determining the optimum blended NPS fertilizers rate and an appropriate inter spacing for leave yield and yield components of girgir crop at Wayu Tuka district, Western Ethiopia
DOI: 10.17632/7k6hwhscs7.1
title: LINF_360065100

description: Phosphoseryl-tRNA Kinase | PSTK
Leishmania infantum (strain JPCM5)
DOI: 10.17632/jn5ckdgsz6.1
title: Stimulating β-adrenergic receptors promotes synaptic potentiation by switching CaMKII movement from LTD to LTP mode

description: Learning, memory and cognition are thought to require synaptic plasticity, specifically including as hippocampal long-term potentiation and depression (LTP and LTD). LTP versus LTD is induced by high- versus low-frequency stimulation (HFS versus LFS) but, stimulating β-adrenergic receptors (βARs) enables LTP induction also by LFS (1 Hz) or theta frequencies (~5 Hz) that don’t cause plasticity by themselves. In contrast to HFS-LTP, such βAR-LTP requires Ca2+-flux through L-type voltage-gated Ca2+-channels, not NMDA-type glutamate receptors (NMDARs). Surprisingly, we found that βAR-LTP still required a non-ionotropic scaffolding function of the NMDAR: the stimulus-induced binding of the Ca2+/calmodulin-dependent protein kinase II (CaMKII) to its GluN2B subunit that mediates CaMKII movement to excitatory synapses. In hippocampal neurons, β-adrenergic stimulation with isoproterenol transformed LTD-type CaMKII movement to LTP-type movement, resulting in CaMKII movement to excitatory instead of inhibitory synapses. Additionally, isoproterenol enabled induction of a major cell-biological feature of LTP in response to LTD stimuli: increased SEP-GluA1 surface expression. Like for βAR-LTP in hippocampal slices, the isoproterenol effects on CaMKII movement and SEP-GluA1 surface expression involved L-type Ca2+-channels and specifically required β2-ARs. Taken together, these results indicate that isoproterenol transforms LTD stimuli to LTP signals by switching CaMKII movement and GluN2B binding to LTP mode.
DOI: 10.17632/b77ft9cpmj.1
title: LINF_360065600

description: adenylyl cyclase-associated protein | CAP/Srv2p
Leishmania infantum (strain JPCM5)
DOI: 10.17632/g8ztbt948z.1
title: Data and code to Social network positions of common waxbills are resilient to prolonged absence and manipulation of ornamental plumage

description: Data and code to replicate the analyses in the paper "Social network positions of common waxbills are resilient to prolonged absence and manipulation of ornamental plumage" Gomes et al. (2023, Animal Behaviour).


This is composed by two R script files with code to replicate analyses and custom-made functions to run specific analyses, one dataset with individuals information within the two experiments, and one set of data as R object with all the data needed to run analyses.

Specifically, it contains:

- 'R code _ SNA_script.R': the complete R scripts needed to replicate social network analyses present in the paper, concerning both experimental manipulation analyses. This should be the only script ran, being the others imported or sourced to R by this code.

- 'data _ manipulations treatment.txt': dataset containing the experimental information of all birds present in, at least, one of the experiments. This dataframe contains the bird ID, sex, origin of waxbills prior to experiments, type of manipulation in either experiment.

- 'R objects_ networks_data.RDATA': it contains the social networks, social dominance scores, and the total time in RFID system, computed for either experimental manipulation's periods.

- 'R code _ DSP-BC_function.R': R script with custom-made functions to run one methodological procedure of the social network analysis.

Article reference:
"Social network positions of common waxbills are resilient to prolonged absence and manipulation of ornamental plumage", Animal Behaviour, 2023.
 Ana Cristina R. Gomes, CIBIO/InBIO, Universidade do Porto, Vairão, Portugal; 
 Neeltje J. Boogert, Centre for Ecology and Conservation, University of Exeter, Penryn, UK; 
 Gonçalo C. Cardoso, CIBIO/InBIO, Universidade do Porto, Vairão, Portugal.

March 2023, Ana Cristina R. Gomes (ana.gomes@cibio.up.pt).
DOI: 10.17632/pw7y7wtsg2.1
title: Stress-sensitive Neural Circuits Change the Gut Microbiome via Duodenal Glands

description: Rare date for cell submission entitled "Stress-sensitive Neural Circuits Change the Gut Microbiome via Duodenal Glands"
DOI: 10.17632/8tzb6zwmzd.1
title: Hardcore Punk Fanzine Culture in Türkiye

description: This dataset is based on a field research that attempts to trace the origins of hardcore punk fanzines in Türkiye. In-depth interviews covering the years 2022-2024 reflect the views of 31 fanzine artists. The data generated here analyses fanzines from a political, economic and social perspective. In this sense, the questions and answers harbour an interdisciplinary strength that attempts to reflect the power of differences.
DOI: 10.17632/vw5ghdk7zm.1
title: Zophobas morio - abf files- raw UHPLC data - hemolymph and feces

description: This study explores the metabolic adaptability of Zophobas morio larvae when exposed to a diet containing Styrofoam, a polystyrene-based plastic. Our hypothesis is that the larvae possess metabolic, enzymatic, and genetic tools to degrade Styrofoam; however, this adaptation may result in metabolic imbalances or the accumulation of recalcitrant by-products. By examining metabolic profiles from their hemolymph and feces, we aim to identify biochemical pathways involved in plastic degradation and assess potential risks of metabolic bottlenecks or harmful by-products. Larvae were divided into three feeding groups: WB (wheat bran - 6) – a control group fed a standard wheat bran diet; WBPS (wheat bran and Styrofoam - 5) – a mixed diet group to assess partial substitution effects; PS (Styrofoam only -1) – a group fed solely on Styrofoam to evaluate full adaptation to plastic consumption.
Samples were collected from the hemolymph and feces of each group after a defined feeding period. Metabolite extraction was performed using a methanol-based protocol to ensure high recovery and compatibility with UHPLC-MS. Ultrahigh-performance liquid chromatography-mass spectrometry (UHPLC-MS) was employed for non-targeted metabolomic analysis.Data Description and Interpretation:The raw UHPLC-MS data include retention times, mass-to-charge ratios (m/z), and ion intensities for metabolites detected in hemolymph and feces from each feeding group. This allows for detailed comparisons of metabolic profiles across different diets. 
Utility of the Data: This dataset provides a foundation for understanding the metabolic pathways involved in plastic degradation in Zophobas morio. It is a valuable resource for identifying enzymes or pathways for biotechnological applications, such as engineered microbial systems for plastic waste management. Researchers can also use the data for comparative studies on other plastic-degrading organisms or assess environmental implications of Styrofoam degradation. How the Data Was Gathered:
The dataset represents raw UHPLC-MS outputs, including chromatographic retention times, spectral m/z values, and ion intensities. All experiments followed validated protocols for reproducibility, with randomized sample analysis to minimize batch effects and appropriate quality control standards included.
DOI: 10.17632/4353p4w73p.1
title: LINF_210019000

description: Transcription factor IIIC subunit | Tau95; Leishmania infantum (strain JPCM5)