cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.97803
title: Data from: Initial disturbance intensity affects recovery rates and successional divergence on abandoned ski slopes

description: The importance of site history (including initial disturbance intensity
 and propagule arrival) in determining successional trajectories is a key
 theoretical and applied line of research in ecology. Abandoned ski slopes
 provide an opportunity to study successional processes following differing
 initial disturbance intensities. Some ski slopes are graded with heavy
 equipment when constructed (‘graded’, severe initial disturbance), while
 others are simply cleared of tall woody vegetation (‘cleared’, lesser
 initial disturbance). In a blocked chronosequence study of graded and
 cleared ski slopes abandoned 10–43 years previously, we found that graded
 ski slopes did not show predictable recovery trajectories over many
 decades. In contrast, cleared ski runs showed significant convergence with
 adjacent reference forest communities. Convergence in community
 composition on cleared ski runs was driven by trees, though understorey
 species were more numerous and dominant during succession. Understorey
 communities did not predictably change in species or life-form composition
 over time, regardless of ski run type. Graded ski runs exhibited little or
 no edaphic recovery over time, showing neither reductions in bare ground
 and visible soil erosion, nor increases in soil depth. Cleared ski runs,
 in contrast, showed evidence of recovery in all of these variables except
 soil depth, which remained uniformly high. Synthesis and applications. The
 creation of new ski slopes by tree clearing is preferable to the grading
 of new slopes with heavy machinery, because grading reduces ecosystem
 function and decreases the predictability of soil and vegetation recovery
 decades after abandonment. Existing graded ski slopes (both operational
 and abandoned) may benefit from restoration of soils and vegetation.
description: Burt and Clary abandoned
 ski slopes datasetSpecies cover data and
 measured environmental characteristics from large (5m by 20 m) plots on
 abandoned ski slopes of differing ages since abandonment and differing
 initial construction methods (graded or cleared) and their paired
 reference forest plots. Readme information included in first worksheet of
 the excel file.
DOI: 10.5061/dryad.7j68h
title: Data from: The costs of being dark: the genetic basis of melanism and its association with fitness-related traits in the sand cricket

description: Melanism is an important component of insect cuticle and serves numerous
 functions that enhance fitness. Despite its importance, there is little
 information on its genetic basis or its phenotypic and genetic correlation
 with fitness-related traits. Here, we examine the heritability of melanism
 in the wing dimorphic sand cricket and determine its phenotypic and
 genetic correlation with wing morphology, gonad mass and size of the
 dorso-longitudinal muscles (the principle flight muscles). Previously
 demonstrated trade-offs among these traits are significant factors in the
 evolution of life history variation. Using path analysis, we show that
 melanization is causally related to gonad mass, but not flight muscle
 mass. Averaged over the sexes, the heritability of melanism was 0.61, the
 genetic correlation with gonad mass was −0.36 and with wing morph was
 0.51. The path model correctly predicted the ranking of melanization score
 in lines selected for increased ovary mass, increased flight muscle mass,
 an index that increased both traits and an unselected control. Our results
 support the general hypothesis that melanization is costly for insects and
 negatively impacts investment in early reproduction.
description: Final.DataExcel file containing color and life history data.
DOI: 10.5061/dryad.pp0q255
title: Data from: Population structure and gene flow of the tropical seagrass, Syringodium filiforme, in the Florida Keys and subtropical Atlantic region

description: Evaluating genetic diversity of seagrasses provides insight into
 reproductive mode and adaptation potential, and is therefore integral to
 broader conservation strategies for coastal ecosystems. In this study, we
 assessed genetic diversity, population structure and gene flow in an
 opportunistic seagrass, Syringodium filiforme, in the Florida Keys and
 subtropical Atlantic region. We used microsatellite markers to analyze 20
 populations throughout the Florida Keys, South Florida, Bermuda and the
 Bahamas primarily to understand how genetic diversity of S. filiforme
 partitions across the Florida Keys archipelago. We found low allelic
 diversity within populations, detecting 35–106 alleles across all
 populations, and in some instances moderately high clonal diversity (R =
 0.04–0.62). There was significant genetic differentiation between Atlantic
 and Gulf of Mexico (Gulf) populations (FST = 0.109 ± 0.027, p-value =
 0.001) and evidence of population structure based on cluster assignment,
 dividing the region into two major genetic demes. We observed asymmetric
 patterns in gene flow, with a few instances in which there was higher than
 expected gene flow from Atlantic to Gulf populations. In South Florida,
 clustering into Gulf and Atlantic groups indicate dispersal in S.
 filiforme may be limited by historical or contemporary geographic and
 hydrologic barriers, though genetic admixture between populations suggests
 exchange may occur between narrow channels in the Florida Keys, or has
 occurred through other mechanisms in recent evolutionary history,
 maintaining regional connectivity. The variable genotypic diversity, low
 genetic diversity and evidence of population structure observed in
 populations of S. filiforme resemble the population genetics expected for
 a colonizer species.
description: Genotypes
 (microsatellites)Microsatellite genotype
 data are provided in the GenAlEx software format.Genalex_Syf_FL_Keys.xlsx
DOI: 10.5061/dryad.8785m
title: Data from: Street lighting: sex-independent impacts on moth movement

description: 1.Artificial lights have become an integral and welcome part of our urban
 and peri-urban environments. However, recent research has highlighted the
 potentially negative ecological consequences of ubiquitous artificial
 light. In particular, insects, especially moths, are expected to be
 negatively impacted by the presence of artificial lights. Previous
 research with light traps has shown a male-biased attraction to light in
 moths. 2.In this study, we sought to determine if street lights could
 limit moth dispersal and if there was any sex bias in attraction to light.
 More specifically, we aimed to determine sex specific attraction radii for
 moths to street lights. 3.We tested these hypotheses by collecting moths
 for two years at an experimental setup. To estimate the attraction radii
 we developed a Markov model and related it to the acquired data.
 4.Utilizing multinomial statistics, we found that attraction rates to
 lights in the middle of the matrix were substantially lower than predicted
 by the null hypothesis of equal attraction level (0.44 times). With the
 Markov model, we estimated that a corner-light was 2.77 times more
 attractive than a wing-light with an equivalent attraction radius of c.
 23m around each light. We found neither sexual differences in the
 attraction rate nor in the attraction radius of males and females. Since
 we captured three times more males than females, we conclude that sex
 ratios are representative of operational sex ratios or of different flight
 activities. 5.These results provide evidence for street lights to limit
 moth dispersal, and that they seem to act equally on male and female
 moths. Consequently, public lighting might divide a suitable landscape
 into many small habitats. Therefore, it is reasonable to assume i) that
 public lighting near hedges and bushes or field margins reduces the
 quality of these important habitat structures, and ii) that public
 lighting near important habitat structures but not interfering with local
 movement may affect moth movement between patches.
description: 2012Collected in the in the
 field in 2012. Table is separated by semicolon
 ";"2013Collected in the in the
 field in 2013. Table is separated by semicolon
 ";"
DOI: 10.5061/dryad.1d63s
title: Data from: Striking cuticular hydrocarbon dimorphism in the mason wasp Odynerus spinipes and its possible evolutionary cause (Hymenoptera: Chrysididae, Vespidae)

description: Cleptoparasitic wasps and bees smuggle their eggs into the nest of a host
 organism. Here the larvae of the cleptoparasite feed upon the food
 provision intended for the offspring of the host. As cleptoparasitism
 incurs a loss of fitness for the host organism (offspring of the host fail
 to develop), hosts of cleptoparasites are expected to exploit cues that
 alert them to potential cleptoparasite infestation. Cuticular hydrocarbons
 (CHCs) could serve as such cues, as insects inevitably leave traces of
 them behind when entering a nest. By mimicking the host’s CHC profile,
 cleptoparasites can conceal their presence and evade detection by their
 host. Previous studies have provided evidence of cleptoparasites mimicking
 their host's CHC profile. However, the impact of this strategy on the
 evolution of the host's CHC profile has remained unexplored. Here, we
 present results from our investigation of a host-cleptoparasite system
 consisting of a single mason wasp species that serves syntopically as the
 host to three cuckoo wasp species. We found that the spiny mason wasp
 (Odynerus spinipes) is able to express two substantially different CHC
 profiles, each of which is seemingly mimicked by a cleptoparasitic cuckoo
 wasp (i.e., Chrysis mediata and Pseudospinolia neglecta). The CHC profile
 of the third cuckoo wasp (Chrysis viridula), a species not expected to
 benefit from mimicking its host's CHC profile due to its particular
 oviposition strategy, differs from the two CHC profiles of its host. Our
 results corroborate the idea that the similarity of the CHC profiles
 between cleptoparasitic cuckoo wasps and their hosts are the result of
 chemical mimicry. They further suggest that cleptoparasites may represent
 a hitherto unappreciated force that drives the evolution of their
 hosts' CHCs.
description: raw
 data_chemistryThis table gives an
 overview of the cuticular hydrocarbons identified and quantified in the
 surface extracts of specimen of Chrysis mediata, C. viridula, Odynerus
 spinipes, O. reniformis, and Pseudospinolia neglecta. The substances are
 identified by name and retention index.dryad_chemistry.xlsxbiometric_distance_data_O.spinipesThis table shows the biometry measurements of Odynerus spinipes.Odynerus_distance_data_2014.09.30.csvbiometric_landmark_data_O.spinipes_and_PC_scoresThis table shows the landmark measurements of Odynerus spinipes forewings and their PC scores.Odynerus_landmark_data_and_PC_scores.csvmeasurement_error_data_biometry_O.spinipesThis table shows the biometric measurements of Odynerus spinipes used in estimating the measurement error.Odynerus_ME_data_2014.09.24.csv
DOI: 10.5061/dryad.g924s
title: Data from: Frequency-dependent and correlational selection pressures have conflicting consequences for assortative mating in a color-polymorphic lizard, Uta stansburiana

description: Genetically determined polymorphisms incorporating multiple traits can
 persist in nature under chronic, fluctuating and sometimes conflicting
 selection pressures. Balancing selection among morphs preserves
 equilibrium frequencies, while correlational selection maintains favorable
 trait combinations within each morph. Under negative frequency-dependent
 selection, females should mate (often disassortatively) with rare male
 morphotypes to produce conditionally fit offspring. Conversely, under
 correlational selection, females should mate assortatively to preserve
 coadapted gene complexes and avoid ontogenetic conflict. Using controlled
 breeding designs, we evaluated consequences of assortative mating patterns
 in color-polymorphic side-blotched lizards (Uta stansburiana), to identify
 conflict between these sources of selection. Females who mated
 disassortatively, and to conditionally high quality males in the context
 of frequency-dependent selection, experienced highest fertility rates. In
 contrast, assortatively-mated females experienced higher fetal viability
 rates. The trade-off between fertility and egg viability resulted in no
 overall fitness benefit to either assortative or disassortative mating
 patterns. These results suggest that ongoing conflict between
 correlational and frequency dependent selection in polymorphic populations
 may generate a trade-off between rare-morph advantage and phenotypic
 integration, and between assortative and disassortative mating decisions.
 More generally, interactions among multiple sources of diversity-promoting
 selection can alter adaptations and dynamics predicted to arise under any
 of these regimes alone.
description: Mating outcomes from
 controlled crosses of side-blotched lizards (Uta
 stansburiana)This data set was
 created from a controlled laboratory breeding study of wild-caught side
 blotched lizards (Uta stansburiana), conducted in 2004 and 2006. Each dam
 is mated to a single sire, and data on their throat colors and mating
 outcomes are provided.Lancaster data for
 DRYAD.xlsx
DOI: 10.34740/kaggle/dsv/14632452
title: BITCOIN Historical Datasets 2018-2026 Binance API
DOI: 10.5061/dryad.6r6t2
title: Data from: Genetic correlations among developmental and contextual behavioral plasticity in Drosophila melanogaster

description: Correlations among traits, including behaviors, are important because
 traits that are genetically correlated may not evolve independently.
 Recently, behavioral correlations research has expanded to include
 correlations not only in mean-level behaviors, but also in behavioral
 plasticity, i.e., the degree to which individuals change their behavior in
 response to environmental stimuli. Positive correlations among behavioral
 plasticities would imply that individuals or genotypes that are
 behaviorally plastic in one way may also be plastic in other ways;
 negative correlations could imply tradeoffs. Here, we examine aversive
 odor conditioning (learning) at two time points, and plasticity in
 pupation site selection behavior across substrates, in a panel of
 Drosophila genotypes. These behaviors represent different types of
 behavioral plasticity: contextual plasticity describes behavioral
 responses to stimuli that are currently present, while developmental
 plasticity describes behavioral responses to remembered experiences with
 stimuli in the recent past. We find that learning scores and plasticity in
 pupation site selection behavior are positively genetically correlated,
 representing the first example of a genetic correlation between
 developmental and contextual plasticity. These findings imply that
 ecological and evolutionary theories focusing on variation in a single
 dimension of behavioral plasticity may be incomplete.
description: learning.dataDescribes experiments testing larval learning behavior in fruit flies.pupation.dataDescribes experiments testing pupation plasticity in fruit flies.
DOI: 10.5061/dryad.v17p8m4
title: Data from: Syndromes in suites of correlated traits suggest multiple mechanisms facilitating invasion in a plant range-expander

description: Various mechanisms can facilitate the success of plant invasions
 simultaneously, but may be difficult to disentangle. We compared plants of
 the range-expanding species Bunias orientalis from populations of native,
 invasive and exotic, not yet invasive origin in a field common garden over
 two years. Plants were grown under two nitrate-regimes and multiple traits
 regarding growth, defence, antagonist loads and reproduction were
 measured. We used a rank-based clustering approach to assign correlated
 traits to distinct suites. These suites were analysed for “syndromes” that
 are expressed as a function of population origin and/or fertilisation
 treatment and might represent different invasion mechanisms. Indeed,
 distinct suites of traits were differentially affected by these factors.
 Our results suggest that different pre-adaptation properties, such as
 certain growth characteristics and intraspecific chemical variation, as
 well as post-introduction adaptations to antagonists and resource
 availability in novel habitats are candidate mechanisms that facilitate
 the success of invasive B. orientalis in parallel. We conclude that
 rank-based clustering is a robust and expedient approach to integrate
 multiple traits for elucidating invasion syndromes within individual
 species. Studying a multitude of traits at different life-history and
 establishment stages of plants grown under distinct resource treatments
 reveals species-specific trade-offs and resource sinks and simplifies the
 interpretation of single trait functions for plant invasiveness.
description: Tewes_Mueller_Neobiota_rawdataraw data for NeoBiota manuscript by Tewes & Müller
DOI: 10.5061/dryad.tp5g2
title: Data from: Developing nuclear DNA phylogenetic markers in the angiosperm genus Leucadendron (Proteaceae): a next-generation sequencing transcriptomic approach

description: Despite the recent advances in generating molecular data, reconstructing
 species-level phylogenies for non-models groups remains a challenge. The
 use of a number of independent genes is required to resolve phylogenetic
 relationships, especially for groups displaying low polymorphism. In such
 cases, low-copy nuclear exons and non-coding regions, such as 3′
 untranslated regions (3′-UTRs) or introns, constitute a potentially
 interesting source of nuclear DNA variation. Here, we present a
 methodology meant to identify new nuclear orthologous markers using both
 public-nucleotide databases and transcriptomic data generated for the
 group of interest by using next generation sequencing technology. To
 identify PCR primers for a non-model group, the genus Leucadendron
 (Proteaceae), we adopted a framework aimed at minimizing the probability
 of paralogy and maximizing polymorphism. We anchored when possible the
 right-hand primer into the 3′-UTR and the left-hand primer into the coding
 region. Seven new nuclear markers emerged from this search strategy, three
 of those included 3′-UTRs. We further compared the phylogenetic potential
 between our new markers and the ribosomal internal transcribed spacer
 region (ITS). The sequenced 3′-UTRs yielded higher polymorphism rates than
 the ITS region did. We did not find strong incongruences with the
 phylogenetic signal contained in the ITS region and the seven new designed
 markers but they strongly improved the phylogeny of the genus
 Leucadendron. Overall, this methodology is efficient in isolating
 orthologous loci and is valid for any non-model group given the
 availability of transcriptomic data.
description: DNA alignment for the
 genus LeucadendronThis alignment is the
 concatenation of eight markers that were designed and described in the
 paper cited above. Those markers were amplified for 42 species collected
 in natural populations in the South-African fynbos, except for two
 external groups which were collected in the Kirstenbosch Botanical Garden.
 A detailed map of the alignment is given below: Positions 1 - 428 :
 PPR_like marker which contains an exon of 233bp and a 3'-UTR of
 195bp. Positions 429 - 1182 : SVR7 marker which contains an exon of 652bp
 and a 3'-UTR of 102bp. Positions 1183 - 1563 : CAF1-6 marker which
 only contains an exon of 381bp. Positions 1564 - 2177 : the classical ITS
 marker. Positions 2178 - 2973 : ATINT1 marker which contains an exon of
 665bp and a 3'-UTR of 131bp. Positions 2974 - 3250 : APO2 marker
 which contains only an exon of 277bp. Positions 3251 - 3908 : ATPHAN
 marker which contains only an exon of 658bp. Positions 3909 - 4247 : APG6
 marker which contains only an exon of 339bpleuca_alignment_papier1_soum.nex
DOI: 10.5061/dryad.1qs7p
title: Data from: Occurrence of spintronics behaviour (half-metallicity, spin gapless semiconductor and bipolar magnetic semiconductor) depending on the location of oxygen vacancies in BiFe 0.83 Ni 0.17 O 3

description: The current communication signifies the effect of oxygen vacancies (OVs)
 both qualitatively and quantitatively in multiferroic BiFe0.83Ni0.17O3 by
 an in-depth atomic-level investigation of its electronic structure and
 magnetization properties, and these materials have a variety of
 applications in spintronics, optoelectronics, sensors and solar energy
 devices. Depending on the precise location of OVs, all the three types of
 spintronic material namely half-metallic, spin gapless semiconductor and
 bipolar magnetic conductor have been established in a single material for
 the first time and both super-exchange and double-exchange interactions
 are possible in accordance with the precise location of OVs. We have also
 calculated the vacancy formation energies to predict their thermodynamic
 stabilities. These results can highlight the impact and importance of OVs
 that can alter the multiferroic properties of materials.
description: input file coordinates
 of the perfect hexagonal cell BiFe0.83Ni0.17O3The input file
 coordinates of hexagonal cell of BiFe0.83Ni0.17O3 are given in the data
 file. Oxygen atoms were removed from this structure to create oxygen
 vacancies.Fig.2 Total density of
 states-Raw dataTotal density of states
 data is given in the attached file. These were plotting
 Fig.2.
DOI: 10.5061/dryad.ns313
title: Data from: Effects of gestational maternal undernutrition on growth, carcass composition and meat quality of rabbit offspring

description: An experiment was conducted in order to evaluate the effects of
 gestational undernutrition of rabbit does on growth, carcass composition
 and meat quality of the offsprings. Thirty primiparous non lactating
 rabbit does were artificially inseminated and randomly divided in three
 treatment groups: Control (C; fed to 100% of maintenance requirements
 throughout gestation, n = 10), early undernourished (EU; fed to 50% of
 maintenance requirements during days 7–19 of gestation, n = 10) and late
 undernourished (LU; fed to 50% of maintenance requirements during days
 20-27 of gestation, n = 10). During the 4th week of the gestation period,
 LU does significantly lost weight compared to C and EU groups
 (P&lt;0.05). At kindling, C does produced litters with higher
 proportions of stillborn kits (P&lt;0.05) while the total litter size
 (alive and stillborn kits) was not different among groups (10.7, 12.8 and
 12.7 kits in C, EU and LU groups, respectively). Kit birth weight tended
 to be lower in the LU group. During fattening, body weight and feed intake
 were not different among offsprings of the three experimental groups.
 Moreover, the maternal undernutrition did not have any impact on carcass
 composition of the offsprings in terms of carcass parts and internal
 organs weights as well as meat quality of L. lumborum muscle (pH24,
 colour, water holding capacity and shear values) at slaughter (70 days of
 age). Therefore, it can be concluded that the gestational undernutrition
 of the mother does not have detrimental effects on the productive and
 quality traits of the offsprings.
description: Data symeon plos1
 undernutrition rab