cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/ghtx6o
title: Description of a new species of weasel shark, Hemigaleus australiensis n. sp. (Carcharhiniformes: Hemigaleidae) from Australian waters.

description: This dataset contains the digitized treatments in Plazi based on the original journal article William T. White, Peter R. Last, Leonard J. V. Compagno (2005): Description of a new species of weasel shark, Hemigaleus australiensis n. sp. (Carcharhiniformes: Hemigaleidae) from Australian waters. Zootaxa 1077: 37-49, URL: http://www.zoobank.org/urn:lsid:zoobank.org:pub:07CAF72E-7644-4F71-9A42-241945FC52D3
DOI: 10.15468/9wdgvv
title: Two new oonopid spider species from Yunnan, China (Araneae, Oonopidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Li, Shuhui, Bian, Dongju, Tong, Yanfeng, Zhang, Zhisheng (2023): Two new oonopid spider species from Yunnan, China (Araneae, Oonopidae). ZooKeys 1181: 155-165, DOI: http://dx.doi.org/10.3897/zookeys.1181.109597, URL: http://dx.doi.org/10.3897/zookeys.1181.109597
DOI: 10.15468/dl.aegrg8
title: Occurrence Download

description: A dataset containing 154 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is one of (Sciodaphyllum heterotrichum, Sciodaphyllum heterotrichum)"
 ]
}

 The dataset includes 154 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0065411-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30949265
title: Structure-based virtual screening and post-docking analysis of a D-amino acid oxidase inhibitor targeting the molecular surface

description: A multi-step structure-based virtual screening (SBVS) campaign was conducted on a 160,000-compound library to identify novel inhibitors targeting an outer surface region of D-amino acid oxidase (DAO), in the absence of known inhibitor binding geometries. The SBVS workflow incorporated druggability-based filtration and employed three docking engines: sievgene, DOCK 6, and AutoDock Vina. After the final screening stage and selection based on consensus among top-ranked compounds, five candidates were evaluated <i>in vitro</i>. Among them, one compound (N-{[(3S,3aS,6aS)-5-benzylhexahydro-2H-furo[2,3-c]pyrrol-3-yl]methyl}pyridine-3-carboximidic acid) exhibited significant inhibitory activity against DAO. To further refine the docking results and identify the most stable binding pose of the compound, we addressed the post-docking challenge using a combination of molecular dynamics (MD) simulations and machine learning-based hierarchical clustering. Poses generated from the three docking engines were classified using four clustering algorithms, and representative poses for each cluster were subjected to MD and binding free energy calculations <i>via</i> the molecular mechanics/generalized Born surface area (MM/GBSA) method. Notably, three poses converged to a common stable state characterized by the lowest binding free energies. The identified inhibitor in this stable state occupied a region spatially distinct from the substrate-binding site, consistent with our design strategy. Furthermore, we evaluated clustering performance based on the consistency between pose classification and calculated binding free energies. Among the tested methods, nearest neighbor and group average clustering exhibited the highest consistency. These findings demonstrate the utility of an integrated virtual screening strategy, including post-docking analysis to refine binding poses, for the robust identification of surface-binding inhibitors.
DOI: 10.6084/m9.figshare.30949265.v1
title: Structure-based virtual screening and post-docking analysis of a D-amino acid oxidase inhibitor targeting the molecular surface

description: A multi-step structure-based virtual screening (SBVS) campaign was conducted on a 160,000-compound library to identify novel inhibitors targeting an outer surface region of D-amino acid oxidase (DAO), in the absence of known inhibitor binding geometries. The SBVS workflow incorporated druggability-based filtration and employed three docking engines: sievgene, DOCK 6, and AutoDock Vina. After the final screening stage and selection based on consensus among top-ranked compounds, five candidates were evaluated <i>in vitro</i>. Among them, one compound (N-{[(3S,3aS,6aS)-5-benzylhexahydro-2H-furo[2,3-c]pyrrol-3-yl]methyl}pyridine-3-carboximidic acid) exhibited significant inhibitory activity against DAO. To further refine the docking results and identify the most stable binding pose of the compound, we addressed the post-docking challenge using a combination of molecular dynamics (MD) simulations and machine learning-based hierarchical clustering. Poses generated from the three docking engines were classified using four clustering algorithms, and representative poses for each cluster were subjected to MD and binding free energy calculations <i>via</i> the molecular mechanics/generalized Born surface area (MM/GBSA) method. Notably, three poses converged to a common stable state characterized by the lowest binding free energies. The identified inhibitor in this stable state occupied a region spatially distinct from the substrate-binding site, consistent with our design strategy. Furthermore, we evaluated clustering performance based on the consistency between pose classification and calculated binding free energies. Among the tested methods, nearest neighbor and group average clustering exhibited the highest consistency. These findings demonstrate the utility of an integrated virtual screening strategy, including post-docking analysis to refine binding poses, for the robust identification of surface-binding inhibitors.
DOI: 10.15468/6a2gd9
title: An update on Termitomorpha Wasman (Coleoptera: Staphylinidae) including a new species, species redescriptions and geographic extension

description: This dataset contains the digitized treatments in Plazi based on the original journal article Silva, Ruan Felipe Da, Caron, Edilson, Carvalho-Filho, Fernando Da Silva (2022): An update on Termitomorpha Wasman (Coleoptera: Staphylinidae) including a new species, species redescriptions and geographic extension. Zootaxa 5205 (1): 1-25, DOI: 10.11646/zootaxa.5205.1.1AbstractThe diversity of Staphylinidae found in termite nests is remarkable. The subfamily Aleocharinae alone contains more than 650 termitophilous species, with termitophilous tribes such as the Corotocini, which includes the genus Termitomorpha Wasman. Here, a new Termitomorpha species from the Eastern Brazilian Amazon is described. Both Termitomorpha fissipennis (Casey) and T. manni (Seevers) are recorded for the first time in Brazil for the states of Pará and Paraíba. The Termitomorpha species identification key is updated. A distribution map for the species is also provided.
DOI: 10.15468/syxyav
title: Expanding the taxonomic knowledge of Adelosgryllus Mesa & Zefa, 2004 (Orthoptera: Grylloidea: Phalangopsidae): description of four new species for Brazilian subterranean habitats

description: This dataset contains the digitized treatments in Plazi based on the original journal article Merlo, Rayanne Lays Sant’Ana, Castro-Souza, Rodrigo Antônio, Junta, Vitor Gabriel Pereira, Ferreira, Rodrigo Lopes (2022): Expanding the taxonomic knowledge of Adelosgryllus Mesa & Zefa, 2004 (Orthoptera: Grylloidea: Phalangopsidae): description of four new species for Brazilian subterranean habitats. Zootaxa 5133 (1): 83-109, DOI: 10.11646/zootaxa.5133.1.4AbstractIn this study, four new Brazilian species are described for the genus Adelosgryllus Mesa & Zefa, 2004, occurring in Minas Gerais, Tocantins and Pará states. Three of these species were found in caves and one was found in endogenous habitats, representing the first record of species form this genus for such habitats. The morphology of the phallic complex was used as the main criterion for distinguishing the new species, the copulatory papilla was also described for one of the new species. Finally, we bring a brief discussion about the ecology, distribution, and conservation of these species.
DOI: 10.6084/m9.figshare.30949121.v2
title: 自然实体锚点式跨学科教学：理论模型检验与机制探索 基于“多彩大自然”准实验的混合方法研究

description: 摘要：目的 检验自然实体锚点式跨学科教学（NEAI）模型对学生环境素养的提升效果，并系统探究其“情感-认知-行为”作用机制。方法 采用整群准实验设计，在乌鲁木齐市场域A与场域B两处选取120名六年级学生，通过盲态分组工具将学生平衡分配至实验组（n=60）与对照组（n=60）。实验组由一位教师实施8周NEAI课程，对照组由另一位教师按常规教学进行。使用青少年环境素养量表、跨学科能力问卷、环境行为核查表（双盲家长报告）收集量化数据，辅以30例分层抽样访谈与120份手抄报质性分析。结果 协方差分析显示，NEAI显著提升学生环境素养（调整后均值差=4.1分，95%CI [3.2, 4.9], F(1,117)=86.42, p&lt;0.001, BF₁₀&gt;1000），效应量Cohen's d=2.38。行为转化率达71%。延迟后测未发现显著衰减（T2 vs T1: p=0.38, TOST等价边界[-0.2, 0.2]）。贝叶斯中介分析发现，情感对行为的直接效应BF₁₀=11.2（强证据支持有直接效应），而“情感→认知→行为”链式中介效应BF₀₁=4.7（中等证据支持无中介）。多层模型分析表明，场域类型与干预无显著交互作用（γ=0.12, p=0.43）。结论 NEAI模型能有效提升学生环境素养，其作用机制主要表现为情感的直接驱动。鉴于小样本与单场点限制，该效应值需在多校复制中校正，机制结论仅提供初步提示，有待大样本验证。
DOI: 10.15468/z7jt6q
title: Identification of Hylarana tytleri (Theobald, 1868): elements for the systematics of the genus Hylarana Tschudi, 1838 (Anura, Ranidae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Hasan, Mahmudul, Lai, June-Shiang, Poyarkov, Nikolay A., Ohler, Annemarie, Oliver, Lauren A., Kakehashi, Ryosuke, Kurabayashi, Atsushi, Sumida, Masayuki (2019): Identification of Hylarana tytleri (Theobald, 1868): elements for the systematics of the genus Hylarana Tschudi, 1838 (Anura, Ranidae). Alytes 37 (1 - 2): 1-30, DOI: 10.5281/zenodo.17079181
DOI: 10.15468/9rjxr3
title: Molecular phylogeny and morphological characterization of Paramicrothyrium bambusae sp. nov. and Tumidispora thailandica sp. nov. from leaf litter

description: This dataset contains the digitized treatments in Plazi based on the original journal article Tennakoon, Danushka S., Hongsanan, Sinang, De Silva, Nimali I., Suwannarach, Nakarin, Lumyong, Saisamorn (2023): Molecular phylogeny and morphological characterization of Paramicrothyrium bambusae sp. nov. and Tumidispora thailandica sp. nov. from leaf litter. Phytotaxa 578 (1): 112-124, DOI: 10.11646/phytotaxa.578.1.6, URL: http://dx.doi.org/10.11646/phytotaxa.578.1.6AbstractDuring our ongoing studies of fungal diversity on leaf litter, two exciting species were collected from Thailand. Morphological examination coupled with phylogenetic analyses revealed that our species belongs to Paramicrothyrium and Tumidispora in Microthyriaceae. Maximum likelihood, maximum parsimony, and Bayesian analyses of combined internal transcribed spacer (ITS) and large nuclear subunit ribosomal DNA (LSU) sequence data were performed to clarify the phylogenetic affinities of the species. Based on their distinctive morphological traits and phylogenetic support, the new species Paramicrothyrium bambusae and Tumidispora thailandica were introduced. In addition, the new species were compared with phylogenetically and morphologically closely related species, and detailed descriptions, micrographs, and phylogenetic trees of the new species are provided.
DOI: 10.15468/hnrrpv
title: A taxonomic integrative approach of the anuran species from a Cerrado- Amazonian transitional area in western Tocantins state, Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Fadel, Renata Moleiro, Silva, Leandro Alves Da, Rodrigues, Luís Reginaldo Ribeiro, Brandão, Reuber Albuquerque, Santana, Diego José, Mângia, Sarah (2025): A taxonomic integrative approach of the anuran species from a Cerrado- Amazonian transitional area in western Tocantins state, Brazil. Zootaxa 5618 (1): 1-28, DOI: 10.11646/zootaxa.5618.1.1, URL: https://doi.org/10.11646/zootaxa.5618.1.1AbstractDue to their complexity environments, ecotonal areas harbor high levels of biodiversity. The Cerrado is geographically situated among other Brazilian biomes and exhibits extensive transitional areas with neighboring biomes. The state of Tocantins, in northern Brazil, has a vast transitional area between the Cerrado and Amazonia in the North and West. Despite the remarkable richness revealed in recent studies, the anuran fauna of Tocantins is likely underestimated, as several municipalities have knowledge gaps, particularly those located in these Cerrado-Amazonia transitional areas. Here, we improve the knowledge of amphibians’ diversity in a Cerrado-Amazonia transitional area in western Tocantins state using integrative taxonomy. We conducted four field expeditions in the Caseara municipality, totaling 50 days of fieldwork. We performed diurnal and nocturnal active surveys and installed pitfall traps along an environmental gradient, ranging from typical Cerrado habitats to typical Amazon habitats. We combined morphology, bioacoustic, and mtDNA to improve the identification of the collected specimens. In total, we collected 738 vouchers assigned to 42 species belonging to seven families. We also present morphometric data for 38 of the recorded species (n = 609), acoustic data for 19 species, and 21 new 16S mtDNA sequences for seven species. These new data were essential to identify 38 of the 42 recorded species at the species level, including interesting new records for species like Allobates crombiei and Scinax similis. Four recorded species remained with an undefined status: Boana sp. (gr. semilineata), Adenomera sp. (aff. hylaedactyla), Physalaemus sp. (gr. cuvieri), and Proceratophrys sp. (cf. ararype). We encourage the use of similar approaches in species inventories to ensure taxonomic accuracy and to provide reliable data for conservation policies.
DOI: 10.15468/bejrww
title: Species diversity, molecular phylogeny and ecological habits of Cyanosporus (Polyporales, Basidiomycota) with an emphasis on Chinese collections

description: This dataset contains the digitized treatments in Plazi based on the original journal article Liu, Shun, Xu, Tai-Min, Song, Chang-Ge, Wu, Chang-Lin ZhaoDong-Mei, Cui, Bao-Kai (2022): Species diversity, molecular phylogeny and ecological habits of Cyanosporus (Polyporales, Basidiomycota) with an emphasis on Chinese collections. MycoKeys 86: 19-46, DOI: http://dx.doi.org/10.3897/mycokeys.86.78305, URL: http://dx.doi.org/10.3897/mycokeys.86.78305
DOI: 10.15468/h44u6q
title: On species of Asclerocheilus Ashworth, 1901 (Annelida: Scalibregmatidae) from Brazil

description: This dataset contains the digitized treatments in Plazi based on the original journal article Mendes, Samuel Lucas Da Silva Delgado, Paiva, Paulo Cesar De, Rizzo, Alexandra E. (2024): On species of Asclerocheilus Ashworth, 1901 (Annelida: Scalibregmatidae) from Brazil. European Journal of Taxonomy 947: 88-108, DOI: 10.5852/ejt.2024.947.2621, URL: https://europeanjournaloftaxonomy.eu/index.php/ejt/article/download/2621/12029Abstract. Scalibregmatidae Malmgren, 1867 is a family of annelids, with only few taxa reported from Brazil. In this work, we describe two new species of Asclerocheilus Ashworth, 1901. The new species A. geiseae sp. nov. and A. blakei sp. nov. were collected during scientific expeditions to the Espírito Santo and Campos sedementary basins. These expeditions were coordinated by PETROBRAS/ CENPES. The species A. geiseae sp. nov. is unique among its congeners by the presence of acicular spines with rounded and curved tips in two rows. The second species, A. blakei sp. nov., differs from its congeners by the combination of the presence of a trapezoidal prostomium, acicular spines on chaetigers 1–3, lyrate chaetae from chaetiger 3 on notopodia and 2 on neuropodia. Moreover, we report the species A. tropicus Blake, 1981 from the localities sampled on this study. We also provide an identification key to all species of Asclerocheilus of the world.
DOI: 10.15468/rtmqpv
title: DNA barcoding and coalescent-based delimitation of endosymbiotic clevelandellid ciliates (Ciliophora: Clevelandellida): a shift to molecular taxonomy in the inventory of ciliate diversity in panesthiine cockroaches

description: This dataset contains the digitized treatments in Plazi based on the original journal article Pecina, Lukáš, Vďačný, Peter (2022): DNA barcoding and coalescent-based delimitation of endosymbiotic clevelandellid ciliates (Ciliophora: Clevelandellida): a shift to molecular taxonomy in the inventory of ciliate diversity in panesthiine cockroaches. Zoological Journal of the Linnean Society 194 (4): 1072-1102, DOI: 10.1093/zoolinnean/zlab063, URL: https://doi.org/10.1093/zoolinnean/zlab063
DOI: 10.15468/igkra4
title: Quelques fourmis de Madagascar récoltées par le Dr Friederichs et quelques remarques sur d'autres fourmis.

description: This dataset contains the digitized treatments in Plazi based on the original journal article Forel, A. (1918): Quelques fourmis de Madagascar récoltées par le Dr Friederichs et quelques remarques sur d'autres fourmis. Bulletin de la Societe Vaudoise des Sciences Naturelles 52: 151-156, URL: http://antbase.org/ants/publications/4071/4071.pdf
DOI: 10.15468/6pcwq5
title: The genus Cacodaemon (Coleoptera, Endomychidae) of Vietnam

description: This dataset contains the digitized treatments in Plazi based on the original journal article Yoshitomi, Hiroyuki, Pham, Thai Hong (2022): The genus Cacodaemon (Coleoptera, Endomychidae) of Vietnam. ZooKeys 1081: 127-136, DOI: http://dx.doi.org/10.3897/zookeys.1081.75927, URL: http://dx.doi.org/10.3897/zookeys.1081.75927
DOI: 10.15468/x2wt9v
title: New records and a new species of the subgenus Antocha (Antocha) Osten Sacken, 1860 (Diptera, Limoniidae) from Northwest China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Qiao, Xue, Wang, Xue, Yang, Ding, Ren, Jinlong (2025): New records and a new species of the subgenus Antocha (Antocha) Osten Sacken, 1860 (Diptera, Limoniidae) from Northwest China. ZooKeys 1256: 179-194, DOI: 10.3897/zookeys.1256.135717AbstractOnly a single species of the subgenus Antocha (Antocha) Osten Sacken (1860) was previously known to occur in Northwest China. In this study, four additional species are added to the regional fauna: A. (A.) bimaculata sp. nov. is described and illustrated as new species, while A. (A.) chonsaniana Podenas, 2015, and A. (A.) turkestanica de Meijere, 1921, which are reported from China for the first time, are illustrated in detail. Additionally, A. (A.) bifida Alexander, 1924, is recorded for the first time recorded in Northwest China. Furthermore, a key to the species of the subgenus Antocha (Antocha) in Northwest China is presented.
DOI: 10.15468/kbyspj
title: Advances in the taxonomy and distribution of Scolomus (Hymenoptera, Ichneumonidae), including the description of a new Andean species and an updated identification key

description: This dataset contains the digitized treatments in Plazi based on the original journal article Araujo, Rodrigo O., Silva-Santos, Isamara, Moreira-Muñoz, Andrés, Montalva, Cristian, Pádua, Diego G. (2025): Advances in the taxonomy and distribution of Scolomus (Hymenoptera, Ichneumonidae), including the description of a new Andean species and an updated identification key. ZooKeys 1234: 207-219, DOI: 10.3897/zookeys.1234.145472AbstractScolomus Townes & Townes, 1950 is a genus in Ichneumonidae, with six species occurring in the Holarctic and Neotropical regions. In this study, a new species is described from Chile, Scolomus valenzuelai Araujo, Pádua & Silva-Santos, sp. nov. Also, the female of S. magellanicus Walkley, 1962 is described for the first time and new occurrences of S. maculatus Araujo & Vivallo, 2018, and S. magellanicus are reported from Chile, including the northernmost record of this genus in South America. Additionally, we provide an updated identification key for all known species of the genus.
DOI: 10.15468/gs3qgd
title: An updated review of the genus Toxorhina Loew, 1850 (Diptera, Limoniidae) from Yunnan, China with a description of a new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Lv, Hanhuiying, Xu, Yuanyuan, Liu, Shulin, Li, Linghui, Lin, Kejian, Zhang, Xiao (2024): An updated review of the genus Toxorhina Loew, 1850 (Diptera, Limoniidae) from Yunnan, China with a description of a new species. ZooKeys 1205: 191-204, DOI: 10.3897/zookeys.1205.117807AbstractSeven species of the genus Toxorhina Loew, 1850 have been recorded from China, of which three are known to occur in Yunnan Province. Herein, all known species from Yunnan, China are reviewed with more detailed descriptions and illustrations of the male hypopygium. A species of Toxorhina belonging to the subgenus Ceratocheilus Wesché, 1910 from Yunnan, T. (C.) pianmica sp. nov., is described and illustrated as new to science.
DOI: 10.15468/t6a5b5
title: Resurrection of Stipa tremula and taxonomy of the high-alpine species from the Stipa purpurea complex (Poaceae, Pooideae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Nobis, Marcin, Krzempek, Marta, Nowak, Arkadiusz, Gudkova, Polina D., Klichowska, Ewelina (2022): Resurrection of Stipa tremula and taxonomy of the high-alpine species from the Stipa purpurea complex (Poaceae, Pooideae). PhytoKeys 196: 21-47, DOI: http://dx.doi.org/10.3897/phytokeys.196.82598, URL: http://dx.doi.org/10.3897/phytokeys.196.82598
DOI: 10.15468/vmf29h
title: New record of the genus Anaplectoidea Shelford, 1906 (Blattodea: Pseudophyllodromiidae: Anaplectoidinae) from India, with description of two new species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Senraj, M., Babu, R., Subramanian, K. A. (2025): New record of the genus Anaplectoidea Shelford, 1906 (Blattodea: Pseudophyllodromiidae: Anaplectoidinae) from India, with description of two new species. Zootaxa 5693 (3): 423-431, DOI: 10.11646/zootaxa.5693.3.7, URL: https://doi.org/10.11646/zootaxa.5693.3.7AbstractThe genus Anaplectoidea Shelford, 1906 is an oriental taxon represented by 13 species in South, South East Asia and China. In the present study, we report the discovery of the genus Anaplectoidea in India, with the description of two new species, Anaplectoidea indica sp. nov. and Anaplectoidea garoensis sp. nov. from Jharkhand and Meghalaya, respectively. Based on a single female specimen, we also report one undescribed species of Anaplectoidea from the Western Ghats. The type specimens of the new species are deposited at the Southern Regional Centre, Zoological Survey of India (SRC, ZSI), Chennai.