cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/ggsk1-4ad70
title: Treponema primitia

description: Treponema primitia.  The rest of the files are in ~/Images/050802
description: <strong>Tilt Series Date:</strong> 2005-08-02</p>
<strong>Data Taken By:</strong> Gavin Murphy</p>
<strong>Species / Specimen:</strong> Treponema primitia</p>
<strong>Strain:</strong> ZAS-2</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1°, constant angular increment, dosage: 30.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod, bsoft</p>
<strong>Collaborators and Roles:</strong> Cells provided by Eric Matson, Jared Leadbetter; Data collected and processed by Gavin Murphy</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown in standard media around exponential growth.  Removed from anaerobic tube with syringe.  I am pretty sure I centrifuged it.</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity...</p>
  T10_050802_Tilt1.jpg: * associated to rawdata T10_050802_Tilt.jpg: * associated to rawdata zap000.jpg: * associated to rawdata T10_050802_Rec1.jpg: file associated to 3D Image #36 T10_050802_Rec.jpg: file associated to 3D Image #36
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2005-08-02-5/rawdata/</p>T10_S488G1_110e10d22kx.mrc,  Tilt Series (Pixel Size 0.98 nm), 1.2 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2005-08-02-5/rawdata/T10_S488G1_110e10d22kx.mrc"
        > <i class="download icon"></i> Download </a></p>

        T10B2s.mrc,  Reconstruction (Pixel Size 0.0 nm), 250.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2005-08-02-5/3dimage_36/T10B2s.mrc"
        > <i class="download icon"></i> Download </a></p>

        T10B2sBB_28_part.pif,  Reconstruction (Pixel Size 0.0 nm), 704.0 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2005-08-02-5/3dimage_37/T10B2sBB_28_part.pif"
        > <i class="download icon"></i> Download </a></p>

        zap000.tif,  * associated to rawdata, 3.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2005-08-02-5/file_89/zap000.tif"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/tvvps-0ay95
title: Pyruvate dehydrogenase

description: E. coli's pyruvate dehydrogenase.  The rest of the files are in ~/Images/040824.
description: <strong>Tilt Series Date:</strong> 2004-08-24</p>
<strong>Data Taken By:</strong> Gavin Murphy</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> purified pyruvate dehydrogenase</p>
<strong>Tilt Series Settings:</strong>  Dual Axis, tilt range: (-63.0°, 63.0°), step: 3°, constant angular increment, dosage: 120.0 eV/Å²,  defocus: -8.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> UCSF Tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod, bsoft</p>
<strong>Collaborators and Roles:</strong> Protein provided by Terrence Wagenknecht, Wadsworth, Albany, NY; Data collected and processed by Gavin Murphy</p>
<strong>Purification / Growth Conditions / Treatment:</strong> E. coli. Pyruvate dehydrogenase and 2-oxoglutarate dehydrogenase obtained from Terrence Wagenknecht at Wadsworth, Albany, NY. Fortunately, I didn't have to purify anything.  Protein was diluted to I think 8 mg/ml and applied to grids.</p>
<strong>Sample Preparation:</strong> quantifoil grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2004-08-24-4/rawdata/</p>P5a_S46G3_60e10d27kx.mrc,  Tilt Series (Pixel Size 0.82 nm), 369.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2004-08-24-4/rawdata/P5a_S46G3_60e10d27kx.mrc"
        > <i class="download icon"></i> Download </a></p>

        P5b_S46G3_60e10d27kx.mrc,  Tilt Series (Pixel Size 0.82 nm), 369.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2004-08-24-4/rawdata/P5b_S46G3_60e10d27kx.mrc"
        > <i class="download icon"></i> Download </a></p>

        P5.mrc,  Reconstruction (Pixel Size 0.0 nm), 612.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2004-08-24-4/3dimage_134/P5.mrc"
        > <i class="download icon"></i> Download </a></p>

        P5_40_part.pif,  Reconstruction (Pixel Size 0.0 nm), 92.8 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gme2004-08-24-4/3dimage_135/P5_40_part.pif"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/wgw80-bx425
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2018-09-06</p>
<strong>Data Taken By:</strong> Jun Zhang</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 41000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-111/rawdata/</p>JV9264_B4.mrc,  Tilt Series (Pixel Size 0.2654 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-111/rawdata/JV9264_B4.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9264_B4_part55_2.rec,  Reconstruction (Pixel Size 1.0616 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-111/3dimage_98003/JV9264_B4_part55_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/jw5n5-0gp23
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2018-11-08</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-57.0°, 57.0°), step: 3°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-11-08-83/rawdata/</p>Fjoh4_50.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-11-08-83/rawdata/Fjoh4_50.mrc"
        > <i class="download icon"></i> Download </a></p>

        Fjoh4_50_part38_3.rec,  Reconstruction (Pixel Size 1.56 nm), 267.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-11-08-83/3dimage_98593/Fjoh4_50_part38_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/yn6d7-7qj61
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2018-10-22</p>
<strong>Data Taken By:</strong> Georges Chreifi</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -4.0 μm,  magnification: 27500x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-10-22-115/rawdata/</p>Fjoh2_12.mrc,  Tilt Series (Pixel Size 0.39 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-10-22-115/rawdata/Fjoh2_12.mrc"
        > <i class="download icon"></i> Download </a></p>

        Fjoh2_12_part55_15.rec,  Reconstruction (Pixel Size 1.56 nm), 267.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/gca2018-10-22-115/3dimage_98390/Fjoh2_12_part55_15.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.7urbv5
title: Occurrence Download

description: A dataset containing 132 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Telmatobius macrostomus"
 ]
}

 The dataset includes 132 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040087-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/rj6af-kqz21
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2018-09-06</p>
<strong>Data Taken By:</strong> Jun Zhang</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 41000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-127/rawdata/</p>JV9264_B54.mrc,  Tilt Series (Pixel Size 0.2654 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-127/rawdata/JV9264_B54.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9264_B54_part51_2.rec,  Reconstruction (Pixel Size 1.0616 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-127/3dimage_98020/JV9264_B54_part51_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/fzjgf-jxw33
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2018-09-06</p>
<strong>Data Taken By:</strong> Jun Zhang</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 41000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-166/rawdata/</p>JV9264_B9.mrc,  Tilt Series (Pixel Size 0.2654 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-166/rawdata/JV9264_B9.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9264_B9_part55_3.rec,  Reconstruction (Pixel Size 1.0616 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-166/3dimage_98058/JV9264_B9_part55_3.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/q0bhh-yrh43
title: STEC031-CDI+Tsx+cellsMixed

description: Raw data files of STEC031-CDI+Tsx+cellsMixed
description: <strong>Tilt Series Date:</strong> 2018-07-20</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-20-17/rawdata/</p>stec031targetinhibitorspot13.mrc,  Tilt Series (Pixel Size 0.538 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-20-17/rawdata/stec031targetinhibitorspot13.mrc"
        > <i class="download icon"></i> Download </a></p>

        stec031targetinhibitorspot13_full.rec,  Reconstruction (Pixel Size 2.152 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2018-07-20-17/3dimage_93710/stec031targetinhibitorspot13_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/jk1zm-qjs18
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2018-09-06</p>
<strong>Data Taken By:</strong> Jun Zhang</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 41000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-125/rawdata/</p>JV9264_B52.mrc,  Tilt Series (Pixel Size 0.2654 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-125/rawdata/JV9264_B52.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9264_B52_part54_10.rec,  Reconstruction (Pixel Size 1.0616 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-125/3dimage_98018/JV9264_B52_part54_10.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/a656e-p2733
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2018-09-06</p>
<strong>Data Taken By:</strong> Jun Zhang</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-54.0°, 54.0°), step: 2°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -7.0 μm,  magnification: 41000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-124/rawdata/</p>JV9264_B51.mrc,  Tilt Series (Pixel Size 0.2654 nm), 1.5 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-124/rawdata/JV9264_B51.mrc"
        > <i class="download icon"></i> Download </a></p>

        JV9264_B51_part53_2.rec,  Reconstruction (Pixel Size 1.0616 nm), 534.5 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jza2018-09-06-124/3dimage_98017/JV9264_B51_part53_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/qx06t-7ae56
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2018-12-07</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -9.0 μm,  magnification: 26000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-07-65/rawdata/</p>conjugation17.mrc,  Tilt Series (Pixel Size 0.53 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-07-65/rawdata/conjugation17.mrc"
        > <i class="download icon"></i> Download </a></p>

        conjugation17_part56_13.rec,  Reconstruction (Pixel Size 2.12 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-07-65/3dimage_99049/conjugation17_part56_13.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/pm5km-s7j74
title: Unspecified

description: Raw data files of Unspecified
description: <strong>Tilt Series Date:</strong> 2018-12-07</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -9.0 μm,  magnification: 26000x. </p>
<strong>Acquisition Software:</strong> SerialEM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-07-71/rawdata/</p>conjugation33.mrc,  Tilt Series (Pixel Size 0.53 nm), 1.6 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-07-71/rawdata/conjugation33.mrc"
        > <i class="download icon"></i> Download </a></p>

        conjugation33_part57_1.rec,  Reconstruction (Pixel Size 2.12 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2018-12-07-71/3dimage_99074/conjugation33_part57_1.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.k46sce
title: Occurrence Download

description: A dataset containing 735 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Gobionellus oceanicus",
 "Country is United States of America",
 "HasCoordinate is true"
 ]
}

 The dataset includes 735 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040088-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pqnfqt
title: Occurrence Download

description: A dataset containing 59793 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Occurrence evidence)",
 "Country is United States of America",
 "OccurrenceStatus is Present",
 "TaxonKey is Ipomoea",
 "Year 1000-2025"
 ]
}

 The dataset includes 59793 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0040023-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/1nm4j-er514
title: Conjugation_Ecoli

description: These are conjugation in Ecoli samples. The cells are the ANB35 cells (donor) and ANB24  .  cells (recipient), More information on these strains can be found in the paper (Direct .  visualization of horizontal gene transfer). These are tomograms from (square 3) in Grid 1 .  from box 4 (See William's notes for more information).  There are cryoLM data for this grid .  obtained during the Linkam stage demo.
description: <strong>Tilt Series Date:</strong> 2019-06-23</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> ANB35, Hfr3000 mrfp1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> The samples were sent by Ariel B Lindner (who is the second author on the above-mentioned . paper) in Paris.</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-33/rawdata/</p>SquThreeTS3.mrc,  Tilt Series (Pixel Size 0.449 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-33/rawdata/SquThreeTS3.mrc"
        > <i class="download icon"></i> Download </a></p>

        SquThreeTS3_full.rec,  Reconstruction (Pixel Size 1.796 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-33/3dimage_104176/SquThreeTS3_full.rec"
        > <i class="download icon"></i> Download </a></p>

        SquThreeTS3.mrc.mdoc,  32.2 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-33/rawdata/SquThreeTS3.mrc.mdoc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/rx3k7-xy195
title: Conjugation_Ecoli

description: These are conjugation samples in Ecoli. The donor strain is ANB35 and the recipient strain is  .  ANB24. More information on these strains can be found in the paper (Direct visualization of .  horizontal gene transfer). These are tomograms from (Square 1) in Grid 1 from box 4 (see .  William's notes for more information).
description: <strong>Tilt Series Date:</strong> 2019-06-23</p>
<strong>Data Taken By:</strong> Mohammed Kaplan</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> MG1655</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -8.0 μm,  magnification: 26000x. </p>
<strong>Microscope:</strong> Caltech Titan Krios</p>
<strong>Acquisition Software:</strong> Serial EM</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> The samples were sent by Ariel B Lindner (who is the second author on the above-mentioned . paper) in Paris. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-13/rawdata/</p>SquOneLM4.mrc,  Tilt Series (Pixel Size 0.449 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-13/rawdata/SquOneLM4.mrc"
        > <i class="download icon"></i> Download </a></p>

        SquOneLM4_full.rec,  Reconstruction (Pixel Size 1.796 nm), 737.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-13/3dimage_104153/SquOneLM4_full.rec"
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        SquOneLM4.mrc.mdoc,  32.3 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/mka2019-06-23-13/rawdata/SquOneLM4.mrc.mdoc"
        > <i class="download icon"></i> Download </a></p>