cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21233/gxqg-3e29
title: Okayama ostracode surface sample dataset

description: Raw data for the Okayama ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.6084/m9.figshare.28805351.v1
title: Suface-based data visualization

description: suface-based data visualization
DOI: 10.6084/m9.figshare.27186117.v1
title: ‘It provided me with a sense of safety that I hadn’t felt in weeks.’ A qualitative case study of service users’ experiences with sensory rooms in psychiatric inpatient units

description: Sensory rooms are environments designed to provide sensory input to help service users regulate arousal and manage distress. Sensory rooms are widely implemented in psychiatric inpatient units, but limited knowledge exists on how the sensory rooms are perceived by those who use them. This study investigated service users’ experiences with sensory rooms during admission. A qualitative case study using semi-structured interviews conducted with 20 participants, admitted in acute, intensive, and open inpatient psychiatric units in Copenhagen, Denmark. Participants used the sensory rooms under guidance from occupational therapists or physiotherapists and were subsequently interviewed about their experiences. Interviews were transcribed and subjected to thematic analysis. Participants reported that being in the sensory rooms helped them to reconnect to their body and to experience peace of mind. Over time, participants used the sensory approaches to develop self-management strategies and enable participation in activities. This study concludes that most of the participants had a positive experience in the sensory room under guidance from one of the unit’s physio or occupational therapists. Participants experienced increased physical and mental calmness in the sensory room and an increased sense of safety which made a difference during their admission and, for several of them, also in terms of their expectations for everyday life following their discharge.
DOI: 10.6084/m9.figshare.28783220.v1
title: _Data_ECOLIND_43655_.csv

description: Research dataset
DOI: 10.17632/9yktcctc4x
title: Raw data-Local structural motifs in proteins Detection and characterization of fragments inserted in helices

description: Informations about research data are detailed in the file doc (list of PDB IDs used).
DOI: 10.6084/m9.figshare.28414181.v1
title: Appendix A. Snow properties and stratigraphy in the pits

description: This dataset contains data on snow properties and stratigraphy in urban (Moscow) and rural (Khotkovo) areas, based on in-situ snow measurements conducted from 2014 to 2022.
DOI: 10.6084/m9.figshare.3523313.v1
title: Appendix C. The relation between the percentage of species inside the null space of both models and several community characteristics.

description: The relation between the percentage of species inside the null space of both models and several community characteristics.
DOI: 10.17632/4rd37dygcc
title: Coupled THMC modeling of dissociation induced deformation of gas hydrate bearing media

description: We have developed a THMC solver to simulate the non-linear equations governing describing gas hydrate dissociation induced deformation. The governing equations are discretized using Finite Volume method for flow and Finite Element method for geomechanics. Generalized effective medium model is used for computing the elastic properties of the hydrate bearing media. PETSc routines are used for non-linear and and linear solvers.  In this dataset,  we have provided the original computer code used for solving the problem as well as a Readme file.
DOI: 10.17632/kby5h2cy9x
title: A comprehensive human gastric cancer organoid biobank captures tumor subtype heterogeneity and enables therapeutic screening. Yan HHN et al. Mendeley Dataset 2

description: Comparison between the somatic mutations detected in gastric cancer organoids and their paired frozen tissue, long-term culture, second tumor region and lymph node metastasis
DOI: 10.6084/m9.figshare.11844924.v1
title: Data for Richman, S. K., J. M. Levine, L. Stehan, & C. A. Johnson. 2020. Asynchronous range shifts drive alpine plant-pollinator interactions and reduce plant fitness. Global Change Biology

description: Dataset for a transplant experiment wherein <br>high-elevation plant communities (40 1m^2 plots)<br>were transplanted 1) laterally at 2000 m and 2) <br>downslope to 1800 m, 1600 m, and 1400m. <br>We made twice-weekly observations of these <br>communities, identifying plants in flower and <br>their floral visitors. We counted seeds for three <br>focal plant species at the end of the growing<br>season. In the analyses, we asked whether<br>elevation explained the floral visitor community, <br>visitation frequency, and seed production. <br>The study was conducted from June-September <br>in the Swiss Alps. See dataset for specific <br>location information. <br><br><br><br>
DOI: 10.6084/m9.figshare.14497767.v2
title: Full CM2 Earthquake Catalogue

description: Full catalogue in vicinity of CM2 well, as shown in Figures 1c and 3cd of Hager et al., A process-based approach to understanding and managing triggered seismicity, Nature, 2021, DOI: 10.1038/s41586-021-03668-z<br><br>
DOI: 10.6084/m9.figshare.23867646.v1
title: Data from: How pondscapes function: Connectivity matters for biodiversity even across small spatial scales in aquatic metacommunities

description: Data are from:Vad, C.F., Péntek, A.L., Cozma, N.J., Földi, A., Tóth, A., Tóth, B., Böde, N.A., Móra, A., Ptacnik, R., Ács, É., Zsuga, K. & Horváth, Z. (2017) Wartime scars or reservoirs of biodiversity? The value of bomb crater ponds in aquatic conservation. <i>Biol. Conserv.</i> <b>209</b>, 253–262, doi: 10.1016/j.biocon.2017.02.025Barbara Barta, Attila Szabó, Beáta Szabó, et al. How pondscapes function: Connectivity matters for biodiversity even across small spatial scales in aquatic metacommunities. <i>Authorea.</i> June 02, 2023. <b>DOI:</b> 10.22541/au.168571967.77925702/v1
DOI: 10.17632/bprwjnbn3j
title: Validation of rubrics of evaluation for the development of the teaching digital competence

description: Instrumento de evaluación de las rúbricas de las  e-Actividades relacionados con el modelo de la competencia digital docente (INTEF, 2017)
DOI: 10.23645/epacomptox.22149200.v1
title: CCTE Mundy High-Content Imaging Neurite Outgrowth Data Update

description: This data contains the results of curve-fitting a subset of high-content imaging neurite outgrowth assay data generated by the Mundy Lab at the EPA Center for Computational Toxicology. Data was curve-fit with tcplLite using tcpl version 2.1.0. Data from the CCTE_Mundy_HCI_iCellGluta_NOG assay corresponds to a correction of the CCTE_Mundy_HCI_CDI_NOG assay data in invitroDBv3.5 for 8 test samples. These corrections will be reflected in a future release of invitroDB. Data from the CCTE_Mundy_HCI_iCellGABA_NOG assay corresponds to 27 test samples that are not present in invitroDBv3.5. This data will be included in a future release of invitroDB. <br> Science Inventory, CCTE products: https://cfpub.epa.gov/si/si_public_search_results.cfm?advSearch=true&showCriteria=2&keyword=CCTE&TIMSType=&TIMSSubTypeID=&epaNumber=&ombCat=Any&dateBeginPublishedPresented=07/01/2017&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&DEID=&personName=&personID=&role=Any&journalName=&journalID=&publisherName=&publisherID=&sortBy=pubDate&count=25
DOI: 10.6084/m9.figshare.12315443.v1
title: OncoSig Input Data

description: This is the input data needed to run the analyses described in the OncoSig data package. <br>See github here for full description of analyses: https://github.com/califano-lab/OncoSig<br>
DOI: 10.6084/m9.figshare.13174808.v1
title: A systematic review on the marine ecotoxicological interactions with offshore petroleum associated contaminants: metadata

description: This metadata set comprises of additional supporting material for the systematic review investigating literature on the marine ecotoxicological interactions with decommissioned offshore petroleum structures and associated contaminants. This dataset comprises of the methodology used for the review, including the recording of database searches, the search terms used and the tiered screening process (title, abstract, full text) for both research aims. We present all the raw data extracted from the papers included in this systematic review, in addition to providing the Australian and New Zealand water and sediment quality guidelines used for comparative measures in the review and an overview of global offshore petroleum decommissioning frameworks.<br>
DOI: 10.6084/m9.figshare.18134048.v1
title: Supplementary Material for: Challenges in the Intraoperative Consultation of Low-Grade Epilepsy-Associated Neuroepithelial Tumors by Cytomorphology in Squash Preparations

description: <b><i>Introduction:</i></b> Low-grade epilepsy-associated neuroepithelial tumors (LEATs) create a diagnostic challenge in daily practice and intraoperative pathological consultation (IC) in particular. Squash smears are extremely useful in IC for accurate diagnosis; however, the knowledge on cytopathologic features of LEATs is based on individual case reports. Here, we discuss the 3 most common and well-established entities of LEATs: ganglioglioma (GG), dysembryoplastic neuroepithelial tumor (DNT), and papillary glioneuronal tumor (PGNT). <b><i>Methods:</i></b> Thirty patients who underwent surgery for GG, DNT, and PGNT between 2001 and 2021 were collected. Squash smears prepared during intraoperative consultation were reviewed by 1 cytopathologist and an experienced neuropathologist. <b><i>Results:</i></b> Among the 30 tumors, 16 (53.3%) were GG, 11 (36.6%) DNT, and 3 (10%) PGNT. Cytomorphologically, all of the 3 tumor types share 2 common features such as dual cell population and vasculocentric pattern. GG smears were characteristically composed of dysplastic ganglion cells and piloid-like astrocytes on a complex architectural background of thin- to thick-walled vessels. DNT, on the other hand, showed oligodendroglial-like cells in a myxoid thin fibrillary background associated with a delicate capillary network. Common cytological features of PGNT were hyperchromatic cells with narrow cytoplasm surrounding hyalinized vessels forming a pseudopapillary pattern and bland cells with neuroendocrine nuclei dispersed in a neuropil background. <b><i>Conclusion:</i></b> A higher diagnostic accuracy can be obtained when squash smears are applied with frozen sections. However, it is important to integrate clinical and radiologic features of the patient as well as to know the cytopathologic features of the LEAT spectrum in the context of differential diagnosis to prevent misinterpretation in the IC.
DOI: 10.6084/m9.figshare.27046177.v1
title: China’s Peaceful Rise, After All? The Threat of Rising Powers Reconsidered

description: These datasets are for a research project examining rising powers' threat.
DOI: 10.17632/kgt97j443w
title: Sensor signal readings csv file - common data set

description: Data collected from Electroocculography based detection apparatus. Information measures the signal amplitude of the readings, with output value in voltage. Corroborates our findings, with the measurement of the signal at a maximum during max displacement readings. To interpret the data, a simple graph may be constructed using Matplot or other csv plotters. The highest amplitude readings corroborate our visual detection of maximum displacement ocular shifts.
DOI: 10.17632/s672yykhf2
title: FEB20 Human Blood Rheology Data (SS, steps, SAOS, LAOS, UDLAOS)

description: Steady state, step up/down in shear rate, SAOS, LAOS, UDLAOS human blood rheology data
DOI: 10.17632/szwcwkhr9h
title: A 3D-Printable smartphone accessory for plant leaf chlorophyll measurement

description: Plant health and nutrition are universally inferred from leaf chlorophyll content. This research developed a 3D-printed accessory which attaches to a smartphone and estimates the concentration of chlorophyll in the leaves of six plant species. It unveils the 3D printing files and assembling details to allow the accessory to be built anywhere. The system uses a smartphone's ambient light sensor to measure the transmission of a 663 nm LED band through intact plant leaves. This band of light is absorbed by chlorophyll and allows its concentration to be measured. Absolute values of chlorophyll content are obtained by calibration against standard spectrophotometer measurements. This accessory is tested by comparing its readings to the universal spectrophotometric method and compared to a standard SPAD 502™ portable meter. This smartphone-connected system that has a 3D-printed body, lighting circuit, and common spare parts, measures chlorophyll in a way comparable to universally used standard systems. Due to the well-studied relationship between chlorophyll concentration and nutritional status of plants, and due to the ubiquitous presence of other sensors in smartphones today, the improvement and adoption of this smartphone accessory would ease the spread of precision farming and digital agronomy practices throughout the different scales of agriculture.
DOI: 10.6084/m9.figshare.3997116.v1
title: Data from Estimating Uncertainty in Daily Weather Interpolations: a Bayesian Framework for Developing Climate Surfaces

description: <b>Paper Abstract: </b>Conservation of biodiversity demands comprehension of evolutionary and ecological patterns and processes that occur over vast spatial and temporal scales. A central goal of ecology is to understand the climatic factors that control ecological processes and this has become even more important in the face of climate change. Especially at global scales, there can be enormous uncertainty in underlying environmental data used to explain ecological processes, but that uncertainty is rarely quantified or incorporated into ecological models. In this study a climate-aided Bayesian kriging approach is used to interpolate 20 years of daily meteorological observations (maximum and minimum temperature and precipitation) to a 1 arc-minute grid for the Cape Floristic Region of South Africa. Independent validation data revealed overall predictive performance of the interpolation to have R2 values of 0.90, 0.85, and 0.59 for maximum temperature, minimum temperature, and precipitation, respectively. A suite of ecologically-relevant climate metrics that include the uncertainty introduced by the interpolation were then generated. By providing the high resolution climate metric surfaces and uncertainties, this work facilitates richer and more robust predictive modeling in ecology and bio- geography. These data can be incorporated into ecological models to propagate the uncertainties through to the final predictions.<b>Data Description:</b>NetCDF file with the mean and standard deviation of the daily temperature and precipitation posterior distributions. Metadata is included within the file.<b>Code:</b>Available at https://github.com/adammwilson/BayesianClimate<br><br>
DOI: 10.17632/nj2tbndp7k
title: Risk factors for atrial fibrillation in patients with a history of adhd under stimulant therapy: a systematic review

description: As shown below, the dataset utilized in the study Risk factors for atrial fibrillation in patients with a history of adhd under stimulant therapy: a systematic review

PRISMA-P Checklist .doc shows PRISMA-P checklist as extended data

data.doc presents the findings and evaluations of five journals concerning the following variables: risk factor of using stimulant therapy on adhd patients, and the correlation between these condition and atrial fibrillation. These journals were checked and extracted into a table to make it easier to understand the contents of the journal. Based on the journal grouping findings, the number of Scopus Q1 indexed journals is one, Q2 is one, Q3 is one, and Q4 is two, with a total of five journals taken and used as references for our systematic observational study.

PRISMA MANUSKRIP.docx shows PRISMA-Flow Diagram of Included Study
DOI: 10.6084/m9.figshare.14483460.v1
title: Supplementary Material for: Intermittent Convective Therapies in Patients with Acute Kidney Injury: A Systematic Review with Meta-Analysis

description: <b><i>Introduction:</i></b> In critically ill patients requiring intermittent renal replacement therapy (RRT), the benefits of convective versus diffusive clearance remain uncertain. We conducted a systematic review and meta-analysis to determine the safety, clinical efficacy, and clearance efficiency of hemofiltration (HF) and hemodiafiltration (HDF) compared to hemodialysis (HD) in patients with acute kidney injury (AKI) receiving intermittent RRT. <b><i>Method:</i></b> We searched Medline, Embase, Cochrane Library, and PROSPERO. We included clinical trials and observational studies that reported the use of intermittent HF or HDF in adult patients with AKI. The following outcomes were included: mortality, renal recovery, clearance efficacy, intradialytic hemodynamic stability, circuit loss, and inflammation modulation. <b><i>Results:</i></b> A total of 3,169 studies were retrieved and screened. Four randomized controlled trials and 4 observational studies were included (<i>n</i>: 615 patients). Compared with conventional HD, intermittent convective therapies had no effect on in-hospital mortality (relative risk, 1.23; 95% confidence interval (CI), 0.76–1.99), renal recovery at 30 days (RR, 0.98; 95% CI, 0.82–1.16), time-to-renal recovery (mean difference [MD], 0.77; 95% CI, −6.56 to 8.10), and number of dialysis sessions until renal recovery (MD, −1.34; 95% CI, −3.39 to 0.72). The overall quality of included studies was low, and dialysis parameters were suboptimal for all included studies. <b><i>Conclusion:</i></b> This meta-analysis suggests that there is no significant difference in short-term mortality and renal recovery in patients with severe AKI when treated with intermittent HF or HDF compared to conventional HD. This systematic review emphasizes the need for further trials evaluating optimal convective parameters in AKI patients treated with intermittent dialysis.
DOI: 10.6084/m9.figshare.23607681.v1
title: patient48.rar

description: A Patient with fundus images that taken by Ret-cam.
DOI: 10.6084/m9.figshare.26037553.v1
title: The basin or catchment of Lake Albert in Uganda

description: This dataset is a shapefile of the Lake Albert in Uganda. The basin is based on free HydroBasins and HydroRivers from HydroSHEDS (Lehner & Grill, 2013; <i>Hydrological Processes, 27(15): 2171–2186</i>).
DOI: 10.6084/m9.figshare.26688440.v1
title: Additional file 6 of A genotyping array for the globally invasive vector mosquito, Aedes albopictus

description: Additional file 6. Functional annotation of SNPs and chip bias evaluation.
DOI: 10.6084/m9.figshare.6960776.v1
title: Earth Analytics Bootcamp | Homework 3 Teaching Subset

description: This is a teaching data subset that contains data for average monthly temperature (Fahrenheit) and total precipitation (millimeters) for Boulder, CO. Data included:<br> 1. Average monthly temperature (Fahrenheit) between 2004 and 2009 (boulder-temp-2004-to-2009.csv): 6 rows (one for each year from 2004 through 2009) and 12 columns (one for each month from January through December) <br><br> 2. Average monthly temperature (Fahrenheit) between 2010 and 2014 (boulder-temp-2010-to-2014.csv): 5 rows (one for each year from 2010 through 2014) and 12 columns (one for each month from January through December) <br><br>3. Average monthly temperature (Fahrenheit) for 2015 (boulder-temp-2015.txt): 12 rows/records (one for each month from January through December) <br>4. Average monthly temperature (Fahrenheit) for 2016 (boulder-temp-2016.txt): 12 rows/records (one for each month from January through December) <br>5. Average monthly temperature (Fahrenheit) for 2017 (boulder-temp-2017.txt): 12 rows/records (one for each month from January through December) <br>6. Total monthly precipitation (mm) from 1996 to 2006 with month names (boulder-precip-1996-to-2006-months.csv): contains headers<br>7. Total monthly precipitation (mm) from 2007 to 2017 with month and season names (boulder-precip-2007-to-2017-months-seasons.csv): contains headers<br> Source: NOAA.<br> <br>
DOI: 10.17632/mhzmzd5cwx
title: GrapesNet: Indian Grape Clusters RGB & RGB-D Image Datasets

description: There are four different RGB and RGB-D image datasets of grape clusters created in Indian vineyards are proposed in the GrapesNet: 
1. Single grape cluster per image with artificial background and single grape cluster per image with real background 
2. Multiple clusters per image with real background 
3. RGB-D images of vineyard with natural environment 
4. Single grape cluster per RGB-D image with some experimental set-ups and artificial environment. 
All the datasets are taken at Indian vineyard in real environmental conditions with different light conditions, different camera angles and different occlusions to build the reliable and robust deep learning models for the real-time applications. White grapes are considered for creating the GrapesNet because most of the presently available vineyard datasets are on red grapes. Total 11000+ images are included in GrapesNet. It is strong believe that all these datasets are very helpful for training, testing and validating the grape cluster detection and segmentation using various deep learning models.
DOI: 10.17632/vw5c9h6s6j
title: 24 hour profile for DLR

description: Dataset for a manuscript submitted to Electric Power Systems Research
DOI: 10.6084/m9.figshare.14216093.v5
title: CombinedDataset.xlsx

description: A global soil respiration dataset with 168 independent measurements in grasslands.<br><br>
DOI: 10.6084/m9.figshare.8949182.v1
title: Data Figure 1: Horizontal eye movements are disturbed in nob mice.

description: Data Figure 1: Horizontal eye movements are disturbed in nob mice.
DOI: 10.17632/gmm7rfrsdt
title: Molecular Dynamics Modeling of Graphene Quantum Dot Epoxy Nanocomposite To Predict Physio-Mechanical Properties

description: Molecular Dynamics simulation workflow to model graphene quantum dot (GQD) and bisphenol F epoxy nanocomposite and predict the physical and mechanical properties. The workflow uses the LAMMPS simulation software to construct four materials - neat epoxy, GQD-epoxy, 4N-GQD-epoxy, and 6N-GQD-epoxy. The neat epoxy system consists of a two-component bisphenol F epoxy. The GQD-epoxy system consists of a pristine GQD embedded in the same epoxy. The 4N-GQD-epoxy and 6N-GQD-epoxy comprise a functionalized GQD with amine groups on the edges. The 4N-GQD has four edge amine groups and 6N-GQD consists of six groups. The simulation results indicate that the pristine GQD-epoxy system predicted a 6% and a 10% decrease in strength and stiffness respectively. On the other hand, the 4N and 6N-GQD-epoxy systems predicted a 15-17% and a 6% increase in strength and stiffness respectively when compared with the neat epoxy.