cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.4288394.v1
title: Modeling the effect of succimer (DMSA; dimercaptosuccinic acid) chelation therapy in patients poisoned by lead

description: <b>Context:</b> Kinetic models could assist clinicians potentially in managing cases of lead poisoning. Several models exist that can simulate lead kinetics but none of them can predict the effect of chelation in lead poisoning. Our aim was to devise a model to predict the effect of succimer (dimercaptosuccinic acid; DMSA) chelation therapy on blood lead concentrations. <b>Materials and methods:</b> We integrated a two-compartment kinetic succimer model into an existing PBPK lead model and produced a Chelation Lead Therapy (CLT) model. The accuracy of the model’s predictions was assessed by simulating clinical observations in patients poisoned by lead and treated with succimer. The CLT model calculates blood lead concentrations as the sum of the background exposure and the acute or chronic lead poisoning. The latter was due either to ingestion of traditional remedies or occupational exposure to lead-polluted ambient air. The exposure duration was known. The blood lead concentrations predicted by the CLT model were compared to the measured blood lead concentrations. <b>Results:</b> Pre-chelation blood lead concentrations ranged between 99 and 150 μg/dL. The model was able to simulate accurately the blood lead concentrations during and after succimer treatment. The pattern of urine lead excretion was successfully predicted in some patients, while poorly predicted in others. <b>Conclusions:</b> Our model is able to predict blood lead concentrations after succimer therapy, at least, in situations where the duration of lead exposure is known.
DOI: 10.6084/m9.figshare.4288382
title: Adult and newborn head and limbs networks - Copy.xls

description: Network models of the musculoskeletal system of the head, upper and lower limb in an adult and a newborn human.
DOI: 10.6084/m9.figshare.4288382.v1
title: Adult and newborn head and limbs networks - Copy.xls

description: Network models of the musculoskeletal system of the head, upper and lower limb in an adult and a newborn human.
DOI: 10.6084/m9.figshare.4288331
title: LT FdC full data for pub.xlsx

description: supporting datasets for publication
DOI: 10.6084/m9.figshare.4288331.v1
title: LT FdC full data for pub.xlsx

description: supporting datasets for publication
DOI: 10.6084/m9.figshare.4288319
title: Prevalence of latent tuberculosis infection among foreign students tested with QuantiFERON-TB Gold In-Tube and QuantiFERON-TB Gold Plus

description: <br>Data used in the article ‘Prevalence of latent tuberculosis infection among foreign students tested with QuantiFERON-TB Gold In-Tube and QuantiFERON-TB Gold Plus'
DOI: 10.6084/m9.figshare.4288319.v1
title: Prevalence of latent tuberculosis infection among foreign students tested with QuantiFERON-TB Gold In-Tube and QuantiFERON-TB Gold Plus

description: <br>Data used in the article ‘Prevalence of latent tuberculosis infection among foreign students tested with QuantiFERON-TB Gold In-Tube and QuantiFERON-TB Gold Plus'
DOI: 10.6084/m9.figshare.4288289
title: Permian strontium isotope stratigraphy

description: Numbers, information, data and references of the samples
DOI: 10.6084/m9.figshare.4288178
title: Microwell-seq Analysis of Human CD34+ Cells

description: Human CD34+ cells from G-CSF-mobilized peripheral blood.48088 Single Cells from 2 donors and 7 batches.<br>
DOI: 10.6084/m9.figshare.4288289.v1
title: Permian strontium isotope stratigraphy

description: Numbers, information, data and references of the samples
DOI: 10.6084/m9.figshare.4288178.v1
title: Microwell-seq Data

description: The data is associated with the paper:<b>Mapping Human Hematopoietic Hierarchy at Single Cell Resolution by Microwell-seq</b>
DOI: 10.6084/m9.figshare.4288178.v3
title: Microwell-seq Analysis of Human CD34+ Cells

description: Human CD34+ cells from G-CSF-mobilized peripheral blood.48088 Single Cells from 2 donors and 7 batches.<br>
DOI: 10.6084/m9.figshare.4288178.v2
title: Unpublished Data

description: The data is related to an unpublished work. Please send an email to ggj@zju.edu.cn if you want to use the data.
DOI: 10.6084/m9.figshare.4288130.v2
title: Richard_Handout_ALS2016

description: "Sociolinguistic constraints on present perfect usage in Australian English narratives."<br>Sophie Richard (University of Western Australia)<br>ALS 2016, Monash University, 7-9 December 2016<br>
DOI: 10.6084/m9.figshare.4288094.v1
title: Richard_Handout_ALS2016.docx

description: "Sociolinguistic constraints on present perfect usage in Australian English narratives"<br>Sophie Richard (University of Western Australia)<br>ALS 2016, Monash University, 7-9 December 2016<br>
DOI: 10.6084/m9.figshare.4287815
title: Data for PeerJ - WNV Modeling

description: Data includes clinical (human case, infected dead birds) data for West Nile Virus in California for years 2004-2010. It also includes different environmental variables data for this time period.
DOI: 10.6084/m9.figshare.4287815.v1
title: Data for PeerJ - WNV Modeling

description: Data includes clinical (human case, infected dead birds) data for West Nile Virus in California for years 2004-2010. It also includes different environmental variables data for this time period.
DOI: 10.6084/m9.figshare.4287773
title: Data to accompany Bellmore et al. 2017: Incorporating food web dynamics into ecological restoration: a modeling approach for river ecosystems

description: This data accompanies the article "Incorporating food web dynamics into ecological restoration: a modeling approach for river ecosystems" accepted for publication in <em>Ecological Applications</em>.Authors: J Ryan Bellmore, Joseph R Benjamin, Michael Newsom, Jennifer Bountry and Daniel DombroskiDataset includes summary of water temperature, substrate size distribution, and stream shading data used to parameterize the Aquatic Trophic Productivity (ATP) model to a floodplain segment of the Methow River, Washington, USA.
DOI: 10.6084/m9.figshare.4287773.v1
title: Data to accompany Bellmore et al. 2017: Incorporating food web dynamics into ecological restoration: a modeling approach for river ecosystems

description: This data accompanies the article "Incorporating food web dynamics into ecological restoration: a modeling approach for river ecosystems" accepted for publication in <em>Ecological Applications</em>.Authors: J Ryan Bellmore, Joseph R Benjamin, Michael Newsom, Jennifer Bountry and Daniel DombroskiDataset includes summary of water temperature, substrate size distribution, and stream shading data used to parameterize the Aquatic Trophic Productivity (ATP) model to a floodplain segment of the Methow River, Washington, USA.
DOI: 10.6084/m9.figshare.4287704
title: Homo_sapiens.GRCh38.86.chromosomes.gtf.tar.gz

description: This is a demo data for GFFview containing complete annotation information of human chromosomes in GTF format, which totally has 1,713,977 line records.<br>
DOI: 10.17608/k6.auckland.4287686
title: NZ University sector performance (2000-2015)

description: The data shows the comparative performance of New Zealand universities on a selection of metrics (e.g. operating revenue, fee income, research income, EFTS numbers, patenting, QS ranking). These graphs are routinely used by the Vice-Chancellor, University of Auckland, in presentations to internal and external audiences. The data has been obtained from secondary sources, principally New Zealand’s Tertiary Education Commission.
DOI: 10.6084/m9.figshare.4287683
title: Wikimedia Mexico phone survey 2016

description: Mexico phone survey 2016<br>In the spring of 2016, the Wikimedia Foundation partnered with a phone survey company and conducted a large-scale survey to learn more about technology and Wikipedia use in Mexico.<br>The 19 questions in the survey covered:* Internet use* Mobile phone use (smartphones & basic voice/SMS phones)* Awareness and use of Wikipedia* General demographics<br>This was a large-scale IVR phone survey, gathering over 2600 completed survey responses from randomly generated numbers across all of Mexico. Voice (IVR) surveys were chosen to include respondents who may not have internet access. This approach allowed us to measure internet and smartphone penetration, along with answering other Wikipedia related questions. Also, the scale and methodology of the survey kept the margin of error low (&lt;2%) for questions asked of all respondents.<br>Questions this survey was designed to answer* What is the actual number of people who use the internet? * Real-world behavior makes this difficult to measure from industry reports, since people might have access to the internet through school, friends, internet cafés, public Wifi, etc.* What do people mostly use the internet for?* How many people use smartphones?* Do people with smartphones use the internet from just Wifi? Or just cellular service?* How many people thought they didn’t use the internet, but do use Facebook or WhatsApp?* How many people had heard of Wikipedia? What did they use it for? How often?* If they had heard of Wikipedia, but weren’t using it, why not?<br>
DOI: 10.6084/m9.figshare.4287683.v1
title: Wikimedia Mexico phone survey 2016

description: Mexico phone survey 2016<br>In the spring of 2016, the Wikimedia Foundation partnered with a phone survey company and conducted a large-scale survey to learn more about technology and Wikipedia use in Mexico.<br>The 19 questions in the survey covered:* Internet use* Mobile phone use (smartphones & basic voice/SMS phones)* Awareness and use of Wikipedia* General demographics<br>This was a large-scale IVR phone survey, gathering over 2600 completed survey responses from randomly generated numbers across all of Mexico. Voice (IVR) surveys were chosen to include respondents who may not have internet access. This approach allowed us to measure internet and smartphone penetration, along with answering other Wikipedia related questions. Also, the scale and methodology of the survey kept the margin of error low (&lt;2%) for questions asked of all respondents.<br>Questions this survey was designed to answer* What is the actual number of people who use the internet? * Real-world behavior makes this difficult to measure from industry reports, since people might have access to the internet through school, friends, internet cafés, public Wifi, etc.* What do people mostly use the internet for?* How many people use smartphones?* Do people with smartphones use the internet from just Wifi? Or just cellular service?* How many people thought they didn’t use the internet, but do use Facebook or WhatsApp?* How many people had heard of Wikipedia? What did they use it for? How often?* If they had heard of Wikipedia, but weren’t using it, why not?<br>
DOI: 10.6084/m9.figshare.4287263
title: Discover DH: Introduction to Digital Humanities Theories and Methods

description: Florida State University Libraries presents an introductory workshop series in the Digital Humanities. These sessions are designed to teach students and faculty the basic theories and methods behind digital research in the humanities. The courses cover a broad range of topics, from larger issues in digital research in the academy to specific tools and research techniques. The weeks will be divided into “yack” sessions and “hack” sessions. The yack sessions will begin with a short presentation on an issue facing humanities scholars in the digital world. These will be followed by a discussion by all participants. For the hack sessions, we will begin learning a specific tool for humanities research. These sessions are hands-on and often require specific tools to be set up in advance.
DOI: 10.6084/m9.figshare.4287302
title: Dataset for 'Tuning Azoheteroarene Photoswitch Performance through Heteroaryl Design'

description: Dataset to accompany article titled 'Tuning Azoheteroarene Photoswitch Performance through Heteroaryl Design', published in J. Am. Chem. Soc., 2016, DOI:<strong></strong>10.1021/jacs.6b11626<br><br>Data included:<br>Characterisation of intermediates and final compounds (IR, NMR, MS)<br>UV/vis spectra<br>Computational data:<br> 1) XYZ geometries for the cis and trans isomers of each photoswitch. Labels "n", "c", "h", "m", "A", "B", etc. refer to key letters to identify the different conformers. 2) XYZ geometries for the transition states: labels "I" and "II" refer to type-I and type-II transition states, respectively. 3) A list of .dat files including the summarized output from time-dependent DFT calculations, i.e. for the absorption spectra properties. The files are organized as follows. 1st column: energy in eV of the transition; 2nd column: energy in nm; 3rd column: oscillator strength of the transition. 4) A series of Gaussian 09 outputs for the calculation of the Wiberg indeces in the cis isomers. <br>
DOI: 10.6084/m9.figshare.4287209
title: Parametric analysis - Apparentness questionnaire - sdm files (participant no/run no)

description: Sdm files for each participant and each of their 6 runs for parametric analysis based on the 'Apparentness of goal' questionnaire.
DOI: 10.6084/m9.figshare.4287089
title: Dataset for: Metabolic Profiling Reveals Reprogramming of Lipid Metabolic Pathways in Treatment of Polycystic Ovary Syndrome with 3-Iodothyronamine

description: Complex diseases such as polycystic ovary syndrome (PCOS) are associated with intricate pathophysiological, hormonal and metabolic feedbacks that make their early diagnosis challenging, thus increasing the prevalence risks for obesity, cardiovascular and fatty liver diseases. To explore the crosstalk between endocrine and lipid metabolic pathways, we administered 3-Iodothyronamine (T1AM), a natural analog of thyroid hormone, in a mouse model of PCOS and analyzed plasma and tissue extracts using multidisciplinary omics and biochemical approaches. T1AM administration induces a profound tissue specific anti-lipogenic effect in liver and muscle by lowering gene expression of key regulators of lipid metabolism, PTP1B and PLIN2, significantly increasing metabolites (glucogenic amino acids, carnitine and citrate) levels, while enhancing protection against oxidative stress. In contrast, T1AM has an opposing effect on the regulation of estrogenic pathways in the ovary by upregulating STAR, CYP11A1 and CYP17A1. Biochemical measurements provide further evidence of significant reduction of liver cholesterol and triglycerides post T1AM—treatment. Our results shed light onto tissue specific metabolic vs. hormonal pathways interactions, thus illuminating the intricacies within the pathophysiology of PCOS. This study opens up new avenues to design drugs for targeted therapeutics to improve quality of life in complex metabolic diseases.
DOI: 10.6084/m9.figshare.4287209.v1
title: Parametric analysis - Apparentness questionnaire - sdm files

description: Sdm files for each participant and each of their 6 runs for parametric analysis based on the 'Apparentness of goal' questionnaire.
DOI: 10.6084/m9.figshare.4287089.v1
title: Dataset for: Metabolic Profiling Reveals Reprogramming of Lipid Metabolic Pathways in Treatment of Polycystic Ovary Syndrome with 3-Iodothyronamine

description: Complex diseases such as polycystic ovary syndrome (PCOS) are associated with intricate pathophysiological, hormonal and metabolic feedbacks that make their early diagnosis challenging, thus increasing the prevalence risks for obesity, cardiovascular and fatty liver diseases. To explore the crosstalk between endocrine and lipid metabolic pathways, we administered 3-Iodothyronamine (T1AM), a natural analog of thyroid hormone, in a mouse model of PCOS and analyzed plasma and tissue extracts using multidisciplinary omics and biochemical approaches. T1AM administration induces a profound tissue specific anti-lipogenic effect in liver and muscle by lowering gene expression of key regulators of lipid metabolism, PTP1B and PLIN2, significantly increasing metabolites (glucogenic amino acids, carnitine and citrate) levels, while enhancing protection against oxidative stress. In contrast, T1AM has an opposing effect on the regulation of estrogenic pathways in the ovary by upregulating STAR, CYP11A1 and CYP17A1. Biochemical measurements provide further evidence of significant reduction of liver cholesterol and triglycerides post T1AM—treatment. Our results shed light onto tissue specific metabolic vs. hormonal pathways interactions, thus illuminating the intricacies within the pathophysiology of PCOS. This study opens up new avenues to design drugs for targeted therapeutics to improve quality of life in complex metabolic diseases.
DOI: 10.5281/zenodo.3739292
title: Risk assessment of Ochratoxin A in food - Summary statistics on occurrence and consumption data and exposure assessment results - Final occurrence data

description: <strong>Annex: Summary statistics on occurrence and consumption data and exposure assessment results</strong> Table 1 Number of analytical results excluded from the initial dataset during data cleaning, and justification for exclusion Table 2 Occurrence values of OTA (µg/kg) in food as reported in the cleaned database Table 3 Occurrence values of OTA (µg/kg) in food as used for the exposure assessment Table 4 Dietary surveys per country and age group available in the EFSA Comprehensive Database, considered in the exposure assessment Table 5 Results of chronic dietary exposure assessment on OTA (ng/kg bw per day) Table 6 Main contributing food categories to the mean LB exposure assessments to OTA across European dietary surveys and population groups Table 7 Distribution of LOQ values among the different food categories Table 8 All contributing food categories to the mean LB and UB exposure to OTA across European dietary surveys and population groups <strong>FormattedDATA_OchratoxinA.zip: Occurrence data on OTA</strong> Contains the occurrence data of OTA on 73,891 food samples presented in the opinion as described in its section 4.7 Occurrence data. The link to the catalogues of controlled terminologies can be found under "Related identifiers”.
description: EU; XLSX; contam@efsa.europa.eu
DOI: 10.5281/zenodo.3739291
title: Risk assessment of Ochratoxin A in food - Summary statistics on occurrence and consumption data and exposure assessment results - Final occurrence data

description: <strong>Annex: Summary statistics on occurrence and consumption data and exposure assessment results</strong> Table 1 Number of analytical results excluded from the initial dataset during data cleaning, and justification for exclusion Table 2 Occurrence values of OTA (µg/kg) in food as reported in the cleaned database Table 3 Occurrence values of OTA (µg/kg) in food as used for the exposure assessment Table 4 Dietary surveys per country and age group available in the EFSA Comprehensive Database, considered in the exposure assessment Table 5 Results of chronic dietary exposure assessment on OTA (ng/kg bw per day) Table 6 Main contributing food categories to the mean LB exposure assessments to OTA across European dietary surveys and population groups Table 7 Distribution of LOQ values among the different food categories Table 8 All contributing food categories to the mean LB and UB exposure to OTA across European dietary surveys and population groups <strong>FormattedDATA_OchratoxinA.zip: Occurrence data on OTA</strong> Contains the occurrence data of OTA on 73,891 food samples presented in the opinion as described in its section 4.7 Occurrence data. The link to the catalogues of controlled terminologies can be found under "Related identifiers”.
description: EU; XLSX; contam@efsa.europa.eu
DOI: 10.6084/m9.figshare.4286795
title: The immersed-body gas-solid interaction model for blast analysis in fractured solid media

description: Data associated with manuscript: <br>Yang, P., J. Xiang, M. Chen, F. Fang, D. Pavlidis, J-P. Latham, and C. C. Pain. "The immersed-body gas-solid interaction model for blast analysis in fractured solid media." <i>International Journal of Rock Mechanics and Mining Sciences</i> 91 (2017): 119-132.
DOI: 10.6084/m9.figshare.4286795.v1
title: The immersed-body gas-solid interaction model for blast analysis in fractured solid media

description: Data associated with manuscript: <br>Yang, P., J. Xiang, M. Chen, F. Fang, D. Pavlidis, J-P. Latham, and C. C. Pain. "The immersed-body gas-solid interaction model for blast analysis in fractured solid media." <i>International Journal of Rock Mechanics and Mining Sciences</i> 91 (2017): 119-132.
DOI: 10.6084/m9.figshare.4286552
title: GFB1_data_figshare.xlsx

description: Global Forest Biodiversity Initiative (GFBI)- Dataset Global#1. Data underpinning the Research Article entitled Positive Biodiversity–Productivity Relationship Predominant in Global Forests<br><br> Data Use Policy 1. GFBI reserves all the rights pertaining to these data; 2. Prior to any use of part of or the entire data set, one must fill out the accompanied Data Use Agreement and email the signed form to albeca.liang@gmail.com 3. The New Zealand sub-dataset (doi:10.7931/V13W29) are not included here. To download:<br>https://datastore.landcareresearch.co.nz/dataset/new-zealand-forest-plot-data-in-global-forest-biodiversity-dataset 4. The plot coordinates are rounded off to a single decimal place. To download the data set with the original plot coordinates, visit: http://www.gfbinitiative.org/data<br><br> Citation Liang, J., T. W. Crowther, N. Picard, S. Wiser, M. Zhou, G. Alberti, E.-D. Schulze, A. D. McGuire, F. Bozzato, H. Pretzsch, S. de-Miguel, A. Paquette, B. Hérault, M. Scherer-Lorenzen, C. B. Barrett, H. B. Glick, G. M. Hengeveld, G.-J. Nabuurs, S. Pfautsch, H. Viana, A. C. Vibrans, C. Ammer, P. Schall, D. Verbyla, N. Tchebakova, M. Fischer, J. V. Watson, H. Y. H. Chen, X. Lei, M.-J. Schelhaas, H. Lu, D. Gianelle, E. I. Parfenova, C. Salas, E. Lee, B. Lee, H. S. Kim, H. Bruelheide, D. A. Coomes, D. Piotto, T. Sunderland, B. Schmid, S. Gourlet-Fleury, B. Sonké, R. Tavani, J. Zhu, S. Brandl, J. Vayreda, F. Kitahara, E. B. Searle, V. J. Neldner, M. R. Ngugi, C. Baraloto, L. Frizzera, R. Bałazy, J. Oleksyn, T. Zawiła-Niedźwiecki, O. Bouriaud, F. Bussotti, L. Finér, B. Jaroszewicz, T. Jucker, F. Valladares, A. M. Jagodzinski, P. L. Peri, C. Gonmadje, W. Marthy, T. O’Brien, E. H. Martin, A. R. Marshall, F. Rovero, R. Bitariho, P. A. Niklaus, P. Alvarez-Loayza, N. Chamuya, R. Valencia, F. Mortier, V. Wortel, N. L. Engone-Obiang, L. V. Ferreira, D. E. Odeke, R. M. Vasquez, S. L. Lewis, and P. B. Reich. 2016. Positive biodiversity-productivity relationship predominant in global forests. Science 354.DOI: 10.1126/science.aaf8957 <br><br> <br>
DOI: 10.6084/m9.figshare.4286564
title: Main analysis and Parametric analysis - Glm's & Mdm's files

description: GLM and MDM files for main analysis (responses_out clean) and parametric analysis (split parametric files) for publication:<sub>Understanding the goals of everyday instrumental actions is primarily linked to object, not motor-kinematic, information : evidence from fMRI.<b></b></sub> <br>
DOI: 10.6084/m9.figshare.4286564.v1
title: Glm's & Mdm's

description: GLM and MDM files from paper <sub>Understanding the goals of everyday instrumental actions is primarily linked to object, not motor-kinematic, information : evidence from fMRI.<b></b></sub> <br>