cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.27058843.v1
title: Genotyping data for <i>Q. serrata</i> and <i>Q. serrata</i> var. <i>brevipetiolata</i>

description: "Genotyping data.txt" is the genotyping data for 258 samples from 30 natural populations in China and Japan of the <i>Q. serrata</i> and <i>Q. serrata </i>var.<i> brevipetiolata</i> scored using Genemarker v. 2.2, then normalized the score by FlexiBinv2 in TXT format.
DOI: 10.6084/m9.figshare.7879796.v1
title: Dataset for: Spatial organization of the transcriptional regulatory network of Saccharomyces cerevisiae

description: Transcriptional regulatory network (TRN) is a directed complex network composed of all regulatory interactions between transcription factors and corresponding target genes. Recently, the three-dimensional (3D) genomics studies have shown that the 3D structure of the genome makes a difference to the regulation of gene transcription, which provides us with a novel perspective. In this study, we constructed the TRN of the budding yeast Saccharomyces cerevisiae and placed it in the context of 3D genome model. We analyzed the spatial organization of the yeast TRN on four levels: global feature, central nodes, hierarchical structure and network motifs. Our results suggested that the TRN of S. cerevisiae presents an optimized structure in space to adapt to functional requirement.
DOI: 10.6084/m9.figshare.5758794.v1
title: test geotiff

description: tiff<br>
DOI: 10.6084/m9.figshare.28777961.v4
title: Supplemental material-NVPP_252910462.docx

description: Supplemental material-NVPP_252910462
DOI: 10.6084/m9.figshare.3552459.v1
title: Appendix A. Simple linear regressions of total population woody growth, reproductive biomass, and percent population woody growth and reproductive biomass as functions of precipitation for each year.

description: Simple linear regressions of total population woody growth, reproductive biomass, and percent population woody growth and reproductive biomass as functions of precipitation for each year.
DOI: 10.6084/m9.figshare.9033914.v2
title: Data input and data sources for extended cost-effectiveness analysis of cigarette price increase in Vietnam

description: Data inputs and data sources for the article "Impact of cigarette price increase on health and financing outcomes in Vietnam"
DOI: 10.17632/wj2gzm5ssh
title: Combinatorial level densities by the real-time method

description: Abstract Levels densities of independent-particle fermionic systems can be calculated easily by using the real-time representation of the evolution operator together with the fast Fourier transform. We describe the method and implement it with a set of Python programs. Examples are provided for the total and partial levels densities of a heavy deformed nucleus (164Dy). The partial level densities that may be calculated are the projected ones on neutron number, proton number, azimuthal angular momentum... Title of program: rt_levels.py Catalogue Id: AEUI_v1_0 Nature of problem Compute many-body level densities of finite systems of fermions described by their single-particle spectra Versions of this program held in the CPC repository in Mendeley Data AEUI_v1_0; rt_levels.py; 10.1016/j.cpc.2014.08.012 This program has been imported from the CPC Program Library held at Queen's University Belfast (1969-2018)
DOI: 10.6084/m9.figshare.19115654.v2
title: Wood feeding and social living: draft genome of the subterranean termite Reticulitermes lucifugus (Blattodea; Termitoidae).

description: Dataset from "Wood feeding and social living: draft genome of the subterranean termite Reticulitermes lucifugus (Blattodea; Termitoidae)."<br>
DOI: 10.6084/m9.figshare.25066010.v1
title: Three <i>de novo</i> assembled wild cacao genomes from the Upper Amazon region

description: <i>Theobroma cacao</i>, the chocolate tree, is indigenous to the Amazon basin, the greatest biodiversity hotspot on earth. In this study, we constructed three high-quality chromosome-level genomes,<i>de novo</i>assembled using long reads sequencing and scaffolded using a reference-free strategy. These genomes represent the three most important genetic clusters of wild cacao trees from the Upper Amazon region. The three wild cacao genomes were compared with two reference genomes of domesticated cacao. We found that the five cacao genetic clusters diverged in the early and middle Pleistocene period, approximately 1.83 – 0.69 million years ago. This finding challenges the existing Pleistocene refugia hypothesis that suggests a more recent cacao intra-specific diversification. We also found significantly higher percentages of transposable elements and lower numbers of disease resistance genes in the wild cacao genomes than in the domesticated reference genomes. Our results serve as an example of understanding how the Amazonian biodiversity was developed. The three wild cacao genomes provide valuable resources for studying cacao genetic diversity.
DOI: 10.6084/m9.figshare.3569031.v1
title: Appendix B. Theorems and mathematical definitions.

description: Theorems and mathematical definitions.
DOI: 10.6084/m9.figshare.20697298.v1
title: The relationship between climate change and malaria in South-East Asia: A systematic review of the evidence (meta-analysis attempt)

description: Underlying data on attempted meta-analysis where early stages of a statistical meta test were deployed.
DOI: 10.6084/m9.figshare.22679458.v1
title: bulk val

description: The bulk and shear datasets for the Materials Project used in Matformer: https://github.com/YKQ98/Matformer
DOI: 10.6084/m9.figshare.3180166.v2
title: Austrian Science Fund (FWF) Publication Cost Data 2015

description: Following the approach for the datasets in 2013 (http://dx.doi.org/10.6084/m9.figshare.988754) and 2014 (https://dx.doi.org/10.6084/m9.figshare.1378610.v14), the Austrian Science Fund (FWF) is making the publication costs spent in 2015 (esp. for Open Access) publically available.The dataset includes payments for publications of authors funded by the Austrian Science Fund (FWF) via following programmes:"Peer-Reviewed Publications": https://www.fwf.ac.at/en/research-funding/fwf-programmes/peer-reviewed-publications/"Stand-Alone Publications": https://www.fwf.ac.at/en/research-funding/fwf-programmes/stand-alone-publications/
DOI: 10.17632/nv8dr4fcw9
title: Tacuadactylus luciae gen. et sp. nov.

description: 3D scan and rendering of spatula
DOI: 10.6084/m9.figshare.22561216.v1
title: Artifiical Intelligence in Online Retail

description: This dataset is collected from India, China and Canada to understand the role of AI tools such as chatbot, virtual assistant, voice & photo search towards customer satisfaction during online shopping.
DOI: 10.6084/m9.figshare.3172813.v1
title: Campitelli-Labollita_Datset_Chessplayers&Students

description: This is a dataset of 25 chess players and 25 university students in a number of judgement and decision making tasks, the cognitive reflection test and Tower of London.
DOI: 10.6084/m9.figshare.27004732.v1
title: Comprehensive Dataset for Event Classification Using Distributed Acoustic Sensing (DAS) Systems

description: This dataset was collected using a Distributed Acoustic Sensing (DAS) system with phase-sensitive Optical Time-Domain Reflectometry (Φ-OTDR) technology. It includes labeled and unlabeled acoustic signal measurements gathered around a university campus, covering activities such as walking, running, vehicular movement, and potential security threats like fiber manipulation and fence climbing. The data was captured using an Optasense ODH-F DAS interrogator, which monitors signals from a buried single-mode fiber optic cable. The dataset, stored in HDF5 format, serves as a critical resource for training machine learning models aimed at event classification in DAS systems. Each event is identified by power spectral density (PSD) representations and labeled accordingly. This dataset is ideal for researchers developing and validating machine learning algorithms for DAS-based applications, including structural health monitoring and perimeter security.
DOI: 10.6084/m9.figshare.5554618.v1
title: Experiment HaLT-SubjectH-160720-6States

description: Experiment in which subject performed 6 imageries of left and right hand motion, left and right leg motion, tongue motion, and a passive state.
DOI: 10.17632/yd3x3dbpbn
title: WIPO Green Inventory International Patent Codes. Spreadsheet database.

description: The WIPO Green Technology Inventory is a set of International Patent Classification (IPC) codes used to identify patents related to green or eco-friendly inventions. This spreadsheet serves as a ready-to-use inventory of these IPC codes, facilitating researchers in their comprehensive research efforts.
DOI: 10.6084/m9.figshare.29206450
title: Additional file 1 of Early transcriptional and cellular abnormalities in choroid plexus of a mouse model of Alzheimer’s disease

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.3517550.v1
title: Appendix A. Summary of the LMM and GLMM models.

description: Summary of the LMM and GLMM models.
DOI: 10.6084/m9.figshare.21440865.v1
title: Dissertation (Dr. med.) - Genotyp-Phänotyp-Untersuchung an einer Münchner Kohorte von Patienten mit krankheitsursächlichen Varianten in COL4A3 und COL4A4 assoziiert mit dem Alport-Syndrom und der Nephropathie vom Typ der dünnen Basalmembran - Supplementäre Tabelle 1: Studienkohorte.

description: Supplementäre Tabelle der Dissertation (Dr. med.) „Genotyp-Phänotyp-Untersuchung an einer Münchner Kohorte von Patienten mit krankheitsursächlichen Varianten in <em>COL4A3</em> und <em>COL4A4</em> assoziiert mit dem Alport-Syndrom und der Nephropathie vom Typ der dünnen Basalmembran" von Hannes Bastian Simmendinger, Institut für Humangenetik, Klinikum rechts der Isar, Technische Universität München (TUM), München, Deutschland. <br> Das Ziel dieser Doktorarbeit ist es, eine mögliche Genotyp-Phänotyp-Korrelation bzgl. (wahrscheinlich) pathogener Varianten in <em>COL4A3</em>/<em>COL4A4</em> und klinischer Daten wie Prävalenz und Alter bei Erstmanifestation von Symptomen aus dem Formenkreis des ARAS bzw. der TBMN bei einer Münchner Patientenkohorte zu untersuchen. Zukünftig könnte so bereits mittels einer Sequenzanalyse neben dem Erbgang eine Prognose zum Verlauf des ARAS bzw. der TBMN gestellt und eine eventuell notwendige Therapie frühzeitig und in adäquater Dosierung eingeleitet werden. <br> Die supplementäre Tabelle enthält umfassende phänotypische und genotypische Informationen der 89 Patienten der Studienkohorte, die aus der größeren Kohorte des Nephrogen-Projekts des Instituts für Humangenetik, Klinikum rechts der Isar, Technische Universität München (TUM), München, Deutschland rekrutiert wurden.
DOI: 10.6084/m9.figshare.23911602.v2
title: Genomic sequence and genome annotation of <i>Quercus aliena</i>

description: Genome assembly of <i>Quercus aliena</i>. Here we shared the annotation files including CDS sequences (QA.cds) and peptide sequences (QA.pep) in fasta format, and also gff annotation file.
DOI: 10.6084/m9.figshare.29206450.v1
title: Additional file 1 of Early transcriptional and cellular abnormalities in choroid plexus of a mouse model of Alzheimer’s disease

description: Supplementary Material 1.
DOI: 10.6084/m9.figshare.7223750.v1
title: Supplementary Material for: The Number of Items on Each Stroop Test Card Is Unrelated to Its Sensitivity

description: <b><i>Objects:</i></b> Different variations of the Stroop Color-Word Test (SCWT) exist and the tests differ in the number of items on each test card. The optimal number of items per card of the SCWT<b><i></i></b> is unclear. <b><i>Methods:</i></b> A comprehensive neuropsychological battery including the SCWT was administered to 237 cognitively normal controls (NC), 221 patients with mild cognitive impairment (MCI), and 160 patients with Alzheimer’s disease (AD). We compared the accuracy for different items of card C (SCWT-C10<sub>accuracy</sub>, SCWT-C24<sub>accuracy</sub>, and SCWT-C50<sub>accuracy</sub>) in distinguishing patients with MCI and AD from NC. <b><i>Results:</i></b> The correct responses for different items of card C were ranked in the order: NC &gt; MCI &gt; AD group and mild AD &gt; moderate AD, except for SCWT-C24<sub>accuracy</sub>. The validity of SCWT-C24<sub>accuracy</sub> was similar to that of SCWT-C50<sub>accuracy</sub> for discriminating MCI and AD from NC, as well as different levels of AD. <b><i>Conclusion:</i></b> We concluded that the number of items on the accuracy of the response was unrelated to its sensitivity to deficits and we preferred the 24-item version in daily clinical use.
DOI: 10.17632/tbt46rs4y6
title: SyntheticFaceDataset_Female_Part3

description: Part 3 of the synthetic facial data rendered from female fbx models. The total dataset contains around 13k facial images generated from 12 identity and the corresponding raw facial depth and head pose.
DOI: 10.4121/12776162.v1
title: BRIGAID: Indicators of climate hazards in Europe (Shapefiles)

description: GIS files showing European loading conditions for the climate hazards; river floods, coastal floods, wildfires, windstorms, heatwave, drought and heavy precipitation.The GIS files are ESRI Shapefiles and are formatted in ETRS89 / ETRS-LAEA projection (EPSG:3035). See 'readme' file for more information.<br>The files can be viewed through the following link;http://www.arcgis.com/home/item.html?id=312d18a14b524d6db594641342925a53<br><br>These file have been developed as part of the BRIGAID Project. Details on the project itself are available on through the website (https://brigaid.eu/) and a project deliverable document (D5.1) providing more information on these indicators can be accessed at https://brigaid.eu/public-deliverables/.<br><br>
DOI: 10.6084/m9.figshare.13150490.v2
title: Influence of Reading Skills on Categorizing Sounds Tasks in Mexican Spanish Speaking Children.sav

description: We explore if performance in categorizing sound tasks (a task to assess phonological awareness ) is influenced by reading skills in a sample of Mexican Spanish-speaking typical readers (n = 36) and children with developmental dyslexia (n = 11). We tested this hypothesis by mean of comparison of scores in two categorizing sounds tasks: one in which phonological beginning of the words share spelling, and other in which spelling is unhelpful or interferes to find the correct answers. Results showed lower scores in the second task, providing evidence that performance in categorizing sounds is influenced by reading skills in typical readers and children with DD. <br><br>
DOI: 10.6084/m9.figshare.16926115.v1
title: item difficulites pattern.sav

description: Dataset for published article in Heliyon
DOI: 10.6084/m9.figshare.7562453.v1
title: Supp. Table 1

description: Supplemental Table 1<br>Reported protein hits for each individual Pfam were tallied for each individual genome.<br><br>Preprint: https://www.biorxiv.org/content/early/2019/01/06/512491
DOI: 10.6084/m9.figshare.11752752.v5
title: Comparative model of novel coronavirus 2019-nCoV protease Mpro

description: Comparative model summary: This is protease Mpro encoded in the RNA of the novel coronavirus 2019-nCoV. This virus first reported in 2019 and now spreading from Wuhan, China, the primary location outbreak. The protein sequence was determined based on the data from the Wuhan seafood market pneumonia virus genome (NCBI genome ID MN908947, GenBank: MN908947.3) published by Wu Et al. (LOCUS MN90894, 23-JAN-2020) by multiple sequences alignments with known SARS proteases. Aligning the sequence region of 2019-nCoV, “orf1ab polyprotein“ with the sequence of PDB 5N5O, the SARS main protease deposited by Zhang and Hilgenfeld in 2017 yield a protease with 306 amino acids. The sequence identity compared to 2H2Z, another SARS crystal structure, published by the Rao lab in 2006 is 96.1 %, similarity is 98.7 % with 100% aligned residues. The model is expected to be of high accuracy.<br>Update:The crystal structure of the protease of our partner Prof. Yang group from ShanghaiTech is oficially released: https://www.rcsb.org/structure/6LU7 and now included in the dataset.<br>
DOI: 10.6084/m9.figshare.13350713.v4
title: Datasets: Global ecosystem-scale plant hydraulic traits retrieved using model-data fusion

description: The files provide the plant hydraulic trait maps associated with "Global ecosystem-scale plant hydraulic traits retrieved using model-data fusion" by Y Liu, NM Holtzman and AG Konings. <br>The Readme.txt describes the contents and variables in each file.
DOI: 10.6084/m9.figshare.157353.v1
title: Bacteria cladogram

description: This cladogram is a simplified version of figure 2 in Wu & Eisen ("A simple fast and accurate method of phylogenomic inference, 2008, Genome Biology 2008, 9:R151, doi:10.1186/gb-2008-9-10-r151). Also indicated in the tree are the expected possitions of eukaryote sequences with an endosymbiotic origin (indicated as CYANOBACTERIA and MITOCHONDRIA).
DOI: 10.6084/m9.figshare.21385059.v1
title: Long-read genome assemblies in two Siniperca fishes

description: A high-quality draft genome of the <em>Siniperca chuatsi</em> and <em>Siniperca scherzeri</em> were generated, and the genome was annotated with a combination of ab initio, RNA-seq and homolog-based prediction methods.
DOI: 10.6084/m9.figshare.27613244.v2
title: Supplementary Material from Predation affects the evolution of sex-specific longevity.

description: Table S1 - Results lmer and lm.odt
DOI: 10.6084/m9.figshare.27986531.v1
title: Generated surfaces

description: DFT-calculated generated surfaces in the article "Inverse Design of Promising Electrocatalysts for CO<sub>2</sub> Reduction via Generative Models and Bird Swarm Algorithm"
DOI: 10.6084/m9.figshare.5126833.v1
title: Supplementary Material for: Recurrent Stroke in the Warfarin versus Aspirin in Reduced Cardiac Ejection Fraction (WARCEF) Trial

description: <b><i>Background and Purpose:</i></b> WARCEF randomized 2,305 patients in sinus rhythm with ejection fraction (EF) ≤35% to warfarin (INR 2.0-3.5) or aspirin 325 mg. Warfarin reduced the incident ischemic stroke (IIS) hazard rate by 48% over aspirin in a secondary analysis. The IIS rate in heart failure (HF) is too low to warrant routine anticoagulation but epidemiologic studies show that prior stroke increases the stroke risk in HF. In this study, we explore IIS rates in WARCEF patients with and without baseline stroke to look for risk factors for IIS and determine if a subgroup with an IIS rate high enough to give a clinically relevant stroke risk reduction can be identified. <b><i>Methods:</i></b> We compared potential stroke risk factors between patients with baseline stroke and those without using the exact conditional score test for Poisson variables. We looked for risk factors for IIS, by comparing IIS rates between different risk factors. For EF we tried cut-off points of 10, 15 and 20%. The cut-off point 15% was used as it was the highest EF that was associated with a significant increase in IIS rate. IIS and EF strata were balanced as to warfarin/aspirin assignment by the stratified randomized design. A multiple Poisson regression examined the simultaneous effects of all risk factors on IIS rate. IIS rates per hundred patient years (/100PY) were calculated in patient groups with significant risk factors. Missing values were assigned the modal value. <b><i>Results:</i></b> Twenty of 248 (8.1%) patients with baseline stroke and 64 of 2,048 (3.1%) without had IIS. IIS rate in patients with baseline stroke (2.37/100PY) was greater than patients without (0.89/100PY) (rate ratio 2.68, p &lt; 0.001). Fourteen of 219 (6.4%) patients with ejection fraction (EF) &lt;15% and 70 of 2,079 (3.4%) with EF ≥15% had IIS. In the multiple regression analysis stroke at baseline (p &lt; 0.001) and EF &lt;15% vs. ≥15% (p = 0.005) remained significant predictors of IIS. IIS rate was 2.04/100PY in patients with EF &lt;15% and 0.95/100PY in patients with EF ≥15% (p = 0.009). IIS rate in patients with baseline stroke and reduced EF was 5.88/100PY with EF &lt;15% decreasing to 2.62/100PY with EF &lt;30%. <b><i>Conclusions:</i></b> In a WARCEF exploratory analysis, prior stroke and EF &lt;15% were risk factors for IIS. Further research is needed to determine if a clinically relevant stroke risk reduction is obtainable with warfarin in HF patients with prior stroke and reduced EF.
DOI: 10.15482/usda.adc/1340592
title: Data from: Solving the Robot-World Hand-Eye(s) Calibration Problem with Iterative Methods
DOI: 10.17632/n3r5v886bs
title: Molecular dynamics simulation of the effect of stress on quartz dissolution in acidic and alkaline aqueous solutions

description: The main purpose of the study is to explain the effect of stress on quartz dissolution at a micro scale. The experiment was conducted under temperature and pressure conditions in the formation, and solutions with different pH values were set. The data mainly includes the structural files used in the molecular simulation process (in. xsd format, which can be opened in BIOVIA Materials Studio (MS) software), as well as experimental results.
DOI: 10.6084/m9.figshare.12034503.v1
title: firm-level trading data (Phase II).csv

description: firm-level emission trading data derived from the European Union Transaction Log.
DOI: 10.6084/m9.figshare.14673111.v1
title: Charge carrier response of Z scheme photocatalyst sheet

description: The original data of the charge carrier dynamics for BiVO4:Mo, and SrTiO3:Rh and their combination with and without charge mediator for different solvents are included.
DOI: 10.6084/m9.figshare.22189705.v1
title: Heeringa_etal_ANF-RLF-aging

description: This dataset belongs to the manuscript entitled: "Cochlear aging disrupts the correlation between spontaneous rate and sound level coding in auditory nerve fibers" by Amarins Heeringa, Fiona Teske, Go Ashida, and Christine Köppl from the University of Oldenburg. The pdf file shows Supplementary Figures S1 and S2 and the Supplementary Table S1. Each excel file contains the data for the listed figure panel(s).
DOI: 10.6084/m9.figshare.4753975.v3
title: AFM Experimental Data

description: Here included are data sets of AFM images, corresponding cell height profiles for all time points, time stamp, and text describing experimental conditions.
DOI: 10.17632/wggbw2fjj7
title: A case study of one local severe convection process caused by meso-β-scale vortex in a forming Southwest China vortex in spring with large eddy simulation

description: The radar and surface precipitation data.
DOI: 10.6084/m9.figshare.22313665.v1
title: Metabolomics data of plateau pika

description: LC-MS untargeted metabolomics analysis of the intestinal sample of plateau pika
DOI: 10.6084/m9.figshare.29206458.v1
title: Additional file 2 of Assessing the damage: analyzing the impact of the COVID-19 pandemic on accelerometer-assessed 24-hour movement behaviours in Brazilian adolescents

description: Additional file 2 is an HTML file including the R code and outputs.
DOI: 10.15468/dl.s6av33
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Platytroctes Günther, 1878",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((9.2698 2.0276,9.1702 1.8496,17.9648 1.8496,17.9648 10.8496,8.9648 10.8496,8.9648 2.8113,8.9984 2.8234,9.2654 3.2175,9.4253 3.0783,9.2698 2.0276))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0013090-250525065834625/datasets/export for details.
DOI: 10.17632/k6pggf8zxw
title: Dynamic Mechanical Analysis (DMA) data for thermoset based structural adhesive Henkel Teroson EP5089

description: The attached data is the result of a temperature-frequency sweep performed on Henkel Teroson EP5089. The DMA data can be used to study the viscoelastic behavior of the epoxy-based thermoset adhesive.