cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7538552
title: Additional file 4: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S3. Expression of salt stresss responsive genes in IR29 and Pok at transcriptional and translational levels. (XLSX 277 kb)
DOI: 10.6084/m9.figshare.7538558.v1
title: Additional file 5: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S4. Genes downregulated at the transcriptional level but upregulated at the translational level in Pok. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.7538552.v1
title: Additional file 4: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S3. Expression of salt stresss responsive genes in IR29 and Pok at transcriptional and translational levels. (XLSX 277 kb)
DOI: 10.7284/101350
title: Multibeam Echosounder data collected during research cruise KM0414 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538543
title: Additional file 3: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S2. Highly expressed genes of Pok and IR29 under control conditions. (XLSX 17980 kb)
DOI: 10.6084/m9.figshare.7538543.v1
title: Additional file 3: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S2. Highly expressed genes of Pok and IR29 under control conditions. (XLSX 17980 kb)
DOI: 10.7284/101351
title: Multibeam Echosounder data collected during research cruise KM0414 using a Kongsberg EM1002 instrument system onboard the platform RV Kilo Moana
DOI: 10.7284/101352
title: Multibeam Echosounder data collected during research cruise KM0415 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538525
title: Additional file 1: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S1. Distribution of assembled transcripts to different categories. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7538525.v1
title: Additional file 1: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S1. Distribution of assembled transcripts to different categories. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.7538516
title: Additional file 16: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S13. Primer sequences used for qPCR validation. (XLSX 10 kb)
DOI: 10.6084/m9.figshare.7538516.v1
title: Additional file 16: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S13. Primer sequences used for qPCR validation. (XLSX 10 kb)
DOI: 10.7284/111092
title: Multibeam Echosounder data collected during research cruise KM0419 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538498
title: Additional file 14: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S12. Significantly regulated alternative splice variants in IR29 and Pok. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7538498.v1
title: Additional file 14: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S12. Significantly regulated alternative splice variants in IR29 and Pok. (XLSX 15 kb)
DOI: 10.7284/111093
title: Multibeam Echosounder data collected during research cruise KM0420 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538495
title: Additional file 13: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S11. Details of novel intergenic transcripts. (XLSX 635 kb)
DOI: 10.6084/m9.figshare.7538486
title: Additional file 12: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S10. DEGs within QTL identified from IR29/Pok population. (XLSX 20 kb)
DOI: 10.7284/111094
title: Multibeam Echosounder data collected during research cruise KM0501 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538486.v1
title: Additional file 12: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S10. DEGs within QTL identified from IR29/Pok population. (XLSX 20 kb)
DOI: 10.6084/m9.figshare.7538477
title: Additional file 11: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S9. DEGs within the salt tolerant quantitative trait loci (QTL) ( www.gramene.org ). (XLSX 636 kb)
DOI: 10.7284/111095
title: Multibeam Echosounder data collected during research cruise KM0502 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538471
title: Additional file 10: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S8. Transcription factors differentially regulated by salt stress in IR29 and Pok at the translational level. (XLSX 27 kb)
DOI: 10.6084/m9.figshare.7538477.v1
title: Additional file 11: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S9. DEGs within the salt tolerant quantitative trait loci (QTL) ( www.gramene.org ). (XLSX 636 kb)
DOI: 10.6084/m9.figshare.7538471.v1
title: Additional file 10: of Comparative transcriptome and translatome analysis in contrasting rice genotypes reveals differential mRNA translation in salt-tolerant Pokkali under salt stress

description: Table S8. Transcription factors differentially regulated by salt stress in IR29 and Pok at the translational level. (XLSX 27 kb)
DOI: 10.7284/111096
title: Multibeam Echosounder data collected during research cruise KM0502 using a Kongsberg EM1002 instrument system onboard the platform RV Kilo Moana
DOI: 10.7284/111187
title: Multiplexed data collected during research cruise KM0503 using a Hawaii UHDAS instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538459
title: Additional file 3 of Novel disease syndromes unveiled by integrative multiscale network analysis of diseases sharing molecular effectors and comorbidities

description: File S3. Mapping between disease bundles and ICD-9-CM diseases from the HCUP clinical datasets. (TXT 24 kb)
DOI: 10.6084/m9.figshare.7538453
title: Additional file 2: of Novel disease syndromes unveiled by integrative multiscale network analysis of diseases sharing molecular effectors and comorbidities

description: File S2. Mapping between disease bundles and diseases from the GWAS Catalog. (TXT 19 kb)
DOI: 10.6084/m9.figshare.7538459.v1
title: Additional file 3 of Novel disease syndromes unveiled by integrative multiscale network analysis of diseases sharing molecular effectors and comorbidities

description: File S3. Mapping between disease bundles and ICD-9-CM diseases from the HCUP clinical datasets. (TXT 24 kb)
DOI: 10.6084/m9.figshare.7538453.v1
title: Additional file 2: of Novel disease syndromes unveiled by integrative multiscale network analysis of diseases sharing molecular effectors and comorbidities

description: File S2. Mapping between disease bundles and diseases from the GWAS Catalog. (TXT 19 kb)
DOI: 10.7284/111097
title: Multibeam Echosounder data collected during research cruise KM0503 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538441
title: Additional file 1: of Novel disease syndromes unveiled by integrative multiscale network analysis of diseases sharing molecular effectors and comorbidities

description: File S1. Comorbid disease pairs (OR &gt; 1.5) sharing molecular mechanisms. In the table we show all the disease pairs resulting comorbid (OR &gt; 1.5 and FDRcomorbidity
DOI: 10.7284/111098
title: Multibeam Echosounder data collected during research cruise KM0503 using a Kongsberg EM1002 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538441.v1
title: Additional file 1: of Novel disease syndromes unveiled by integrative multiscale network analysis of diseases sharing molecular effectors and comorbidities

description: File S1. Comorbid disease pairs (OR &gt; 1.5) sharing molecular mechanisms. In the table we show all the disease pairs resulting comorbid (OR &gt; 1.5 and FDRcomorbidity
DOI: 10.6084/m9.figshare.7538420
title: Additional file 8: of Gut microbiome changes in overweight male adults following bowel preparation

description: Tables S4-S9. Significant correlations for each type group at each sample collection time. (XLSX 27â kb)
DOI: 10.7284/111100
title: Multibeam Echosounder data collected during research cruise KM0505 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538420.v1
title: Additional file 8: of Gut microbiome changes in overweight male adults following bowel preparation

description: Tables S4-S9. Significant correlations for each type group at each sample collection time. (XLSX 27â kb)
DOI: 10.7284/111101
title: Multibeam Echosounder data collected during research cruise KM0505 using a Kongsberg EM1002 instrument system onboard the platform RV Kilo Moana
DOI: 10.7284/101355
title: Multibeam Echosounder data collected during research cruise KM0507 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.7284/101356
title: Multibeam Echosounder data collected during research cruise KM0510 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538384
title: Additional file 2: of Gut microbiome changes in overweight male adults following bowel preparation

description: Table S2. Percentage of fecal samples and mean relative abundances of the 131 genera. (XLSX 27â kb)
DOI: 10.6084/m9.figshare.7538384.v1
title: Additional file 2: of Gut microbiome changes in overweight male adults following bowel preparation

description: Table S2. Percentage of fecal samples and mean relative abundances of the 131 genera. (XLSX 27â kb)
DOI: 10.7284/101357
title: Multibeam Echosounder data collected during research cruise KM0510 using a Kongsberg EM1002 instrument system onboard the platform RV Kilo Moana
DOI: 10.7284/101358
title: Multibeam Echosounder data collected during research cruise KM0511 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.7284/101359
title: Multibeam Echosounder data collected during research cruise KM0511 using a Kongsberg EM1002 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538348
title: Additional file 15: of Gut microbiome changes in overweight male adults following bowel preparation

description: Table S16. Descriptive statistics of blood test. (XLSX 17â kb)
DOI: 10.7284/111079
title: Multibeam Echosounder data collected during research cruise KM0512 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538348.v1
title: Additional file 15: of Gut microbiome changes in overweight male adults following bowel preparation

description: Table S16. Descriptive statistics of blood test. (XLSX 17â kb)
DOI: 10.6084/m9.figshare.7538330
title: Additional file 13: of Gut microbiome changes in overweight male adults following bowel preparation

description: Table S13. Descriptive statistics of blood test. (XLSX 13â kb)
DOI: 10.6084/m9.figshare.7538330.v1
title: Additional file 13: of Gut microbiome changes in overweight male adults following bowel preparation

description: Table S13. Descriptive statistics of blood test. (XLSX 13â kb)
DOI: 10.6084/m9.figshare.7538321
title: Additional file 11: of Gut microbiome changes in overweight male adults following bowel preparation

description: Table S12. The P-values of the predictive functional modules of the Type 2 Fecal community. (XLSX 23â kb)
DOI: 10.6084/m9.figshare.7538315
title: Additional file 2 of Identifying sequence features that drive ribosomal association for lncRNA

description: Raw data for human. (ZIP 9950 kb)
DOI: 10.6084/m9.figshare.7538318
title: Additional file 3 of Identifying sequence features that drive ribosomal association for lncRNA

description: Raw data for mouse. (ZIP 5080 kb)
DOI: 10.6084/m9.figshare.7538321.v1
title: Additional file 11: of Gut microbiome changes in overweight male adults following bowel preparation

description: Table S12. The P-values of the predictive functional modules of the Type 2 Fecal community. (XLSX 23â kb)
DOI: 10.6084/m9.figshare.7538315.v1
title: Additional file 2 of Identifying sequence features that drive ribosomal association for lncRNA

description: Raw data for human. (ZIP 9950 kb)
DOI: 10.6084/m9.figshare.7538318.v1
title: Additional file 3 of Identifying sequence features that drive ribosomal association for lncRNA

description: Raw data for mouse. (ZIP 5080 kb)
DOI: 10.7284/101360
title: Multibeam Echosounder data collected during research cruise KM0513 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7538309
title: Additional file 1: of Computational prediction of plasma protein binding of cyclic peptides from small molecule experimental data using sparse modeling techniques

description: Table S1. referred to in the main article. http://www.bi.cs.titech.ac.jp/giw2018/SupplementaryTableS1.xlsx . (XLSX 86 kb)
DOI: 10.6084/m9.figshare.7538312
title: Additional file 10: of Gut microbiome changes in overweight male adults following bowel preparation

description: Table S11. The P-values of the predictive functional modules of the Type 1 fecal microbial community. (XLSX 23â kb)
DOI: 10.6084/m9.figshare.7538309.v1
title: Additional file 1: of Computational prediction of plasma protein binding of cyclic peptides from small molecule experimental data using sparse modeling techniques

description: Table S1. referred to in the main article. http://www.bi.cs.titech.ac.jp/giw2018/SupplementaryTableS1.xlsx . (XLSX 86 kb)
DOI: 10.6084/m9.figshare.7538312.v1
title: Additional file 10: of Gut microbiome changes in overweight male adults following bowel preparation

description: Table S11. The P-values of the predictive functional modules of the Type 1 fecal microbial community. (XLSX 23â kb)
DOI: 10.7284/101361
title: Multibeam Echosounder data collected during research cruise KM0514 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538294
title: Additional file 1: of Novel link prediction for large-scale miRNA-lncRNA interaction network in a bipartite graph

description: The top-50 ranking lists of candidate target lncRNAs for each type of miRNA with the corresponding prediction scores by using miRNA-based group preference. (XLSX 410 kb)
DOI: 10.7284/101362
title: Multibeam Echosounder data collected during research cruise KM0515 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7538294.v1
title: Additional file 1: of Novel link prediction for large-scale miRNA-lncRNA interaction network in a bipartite graph

description: The top-50 ranking lists of candidate target lncRNAs for each type of miRNA with the corresponding prediction scores by using miRNA-based group preference. (XLSX 410 kb)
DOI: 10.6084/m9.figshare.7538285
title: Additional file 1: of FMSM: a novel computational model for predicting potential miRNA biomarkers for various human diseases

description: The prediction list of most latent miRNA biomarkers for various investigated diseases has been publicly released. (XLSX 3187 kb)
DOI: 10.7284/111103
title: Multibeam Echosounder data collected during research cruise KM0516 using a Kongsberg EM1002 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538285.v1
title: Additional file 1: of FMSM: a novel computational model for predicting potential miRNA biomarkers for various human diseases

description: The prediction list of most latent miRNA biomarkers for various investigated diseases has been publicly released. (XLSX 3187 kb)
DOI: 10.6084/m9.figshare.7538276
title: CCDB_33.jpg

description: Image mosaic of a section through mouse cerebellum showing the distribution of alpha synuclein (green) in transgenic mouse overexpressing alpha synuclein. Section was counterstained with a nuclear stain (blue) to reveal the locations of cell somata
DOI: 10.6084/m9.figshare.7538279
title: Additional file 1 of Identification of pre-microRNAs by characterizing their sequence order evolution information and secondary structure graphs

description: Describes the set of all the features extracted, which is 591. (XLSX 19.7 kb)
DOI: 10.6084/m9.figshare.7538282
title: Additional file 2 of Identification of pre-microRNAs by characterizing their sequence order evolution information and secondary structure graphs

description: Describes the optimal feature set, which is 268. (XLSX 15.4 kb)
DOI: 10.7284/101363
title: Multibeam Echosounder data collected during research cruise KM0517 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7538276.v1
title: CCDB_33.jpg

description: Image mosaic of a section through mouse cerebellum showing the distribution of alpha synuclein (green) in transgenic mouse overexpressing alpha synuclein. Section was counterstained with a nuclear stain (blue) to reveal the locations of cell somata
DOI: 10.6084/m9.figshare.7538279.v1
title: Additional file 1 of Identification of pre-microRNAs by characterizing their sequence order evolution information and secondary structure graphs

description: Describes the set of all the features extracted, which is 591. (XLSX 19.7 kb)
DOI: 10.6084/m9.figshare.7538282.v1
title: Additional file 2 of Identification of pre-microRNAs by characterizing their sequence order evolution information and secondary structure graphs

description: Describes the optimal feature set, which is 268. (XLSX 15.4 kb)
DOI: 10.6084/m9.figshare.7538270
title: CCDB_31.jpg

description: Maximum intensity projection of a tomographic reconstruction of a selectively stained spiny dendrite from a striatal medium spiny neuron from the neostriatum of a wildtype mouse.
DOI: 10.6084/m9.figshare.7538273
title: CCDB_32.jpg

description: Maximum intensity project of a tomographic reconstruction of a spiny dendrite from a 4 ?m thick section throuh medium spiny neuron of mouse caudateputamen
DOI: 10.7284/101364
title: Multibeam Echosounder data collected during research cruise KM0518 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538270.v1
title: CCDB_31.jpg

description: Maximum intensity projection of a tomographic reconstruction of a selectively stained spiny dendrite from a striatal medium spiny neuron from the neostriatum of a wildtype mouse.
DOI: 10.6084/m9.figshare.7538273.v1
title: CCDB_32.jpg

description: Maximum intensity project of a tomographic reconstruction of a spiny dendrite from a 4 ?m thick section throuh medium spiny neuron of mouse caudateputamen
DOI: 10.6084/m9.figshare.7538255
title: CCDB_27.jpg

description: Tomographic reconstruction of a portion of medium spiny neuron in a 4 um thick section. This data set is poorly aligned due to a lack of adquate fiducial markers. This volume is an example of a poor reconstruction
DOI: 10.6084/m9.figshare.7538258
title: CCDB_29.jpg

description: Image mosaic of a section through striatum showing localization of alpha synuclein in a transgenic mouse overexpressing alpha synuclein
DOI: 10.6084/m9.figshare.7538264
title: CCDB_30.jpg

description: Image mosaic of a section through striatum showing localization of alpha synuclein in a wild type mouse. Dark area in upper right (cortex) results from uneveness in section flatness rather than lack of staining in this area
DOI: 10.6084/m9.figshare.7538255.v1
title: CCDB_27.jpg

description: Tomographic reconstruction of a portion of medium spiny neuron in a 4 um thick section. This data set is poorly aligned due to a lack of adquate fiducial markers. This volume is an example of a poor reconstruction
DOI: 10.6084/m9.figshare.7538258.v1
title: CCDB_29.jpg

description: Image mosaic of a section through striatum showing localization of alpha synuclein in a transgenic mouse overexpressing alpha synuclein
DOI: 10.6084/m9.figshare.7538264.v1
title: CCDB_30.jpg

description: Image mosaic of a section through striatum showing localization of alpha synuclein in a wild type mouse. Dark area in upper right (cortex) results from uneveness in section flatness rather than lack of staining in this area
DOI: 10.6084/m9.figshare.7538249
title: CCDB_24.jpg

description: Correlated Microscopy of Dendritic Spines
DOI: 10.6084/m9.figshare.7538252
title: CCDB_25.jpg

description: Montage of cerebellar cortex triple labeled for Hoescht stain (blue);neurofilament (green) and GFAP (red)
DOI: 10.7284/101365
title: Multibeam Echosounder data collected during research cruise KM0518 using a Kongsberg EM1002 instrument system onboard the platform RV Kilo Moana
DOI: 10.6084/m9.figshare.7538249.v1
title: CCDB_24.jpg

description: Correlated Microscopy of Dendritic Spines
DOI: 10.6084/m9.figshare.7538252.v1
title: CCDB_25.jpg

description: Montage of cerebellar cortex triple labeled for Hoescht stain (blue);neurofilament (green) and GFAP (red)
DOI: 10.6084/m9.figshare.7538240
title: CCDB_22.jpg

description: Single slice through the middle of a tomographic reconstruction of Purkinje cell spines labeled for F-actin
DOI: 10.6084/m9.figshare.7538243
title: CCDB_23.jpg

description: Montage of cerebellar cortex triple labeled for Hoescht stain (blue), IP3 receptor (green) and GFAP (red)
DOI: 10.7284/101366
title: Multibeam Echosounder data collected during research cruise KM0519 using a Kongsberg EM120 instrument system onboard the platform RV Kilo Moana

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7538237
title: CCDB_21.jpg

description: Investigation of morphological alterations of post-synaptic densities following an episode of transient ischemia
DOI: 10.6084/m9.figshare.7538243.v1
title: CCDB_23.jpg

description: Montage of cerebellar cortex triple labeled for Hoescht stain (blue), IP3 receptor (green) and GFAP (red)
DOI: 10.6084/m9.figshare.7538240.v1
title: CCDB_22.jpg

description: Single slice through the middle of a tomographic reconstruction of Purkinje cell spines labeled for F-actin