cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.4476366
title: Cyclophilin A/EMMPRIN Axis Is Involved in Pro-Fibrotic Processes Associated with Thoracic Aortic Aneurysm of Marfan Syndrome Patients

description: Abstract: Background: Marfan syndrome (MFS) is a genetic disease, characterized by thoracic aortic aneurysm (TAA), which treatment is to date purely surgical. Understanding of novel molecular targets is mandatory to unveil effective pharmacological approaches. Cyclophilin A (CyPA) and its receptor EMMPRIN are associated with several cardiovascular diseases, including abdominal aortic aneurysm. Here, we envisioned the contribution of CyPA/EMMPRIN axis in MFS-related TAA. Methods: We obtained thoracic aortic samples from healthy controls (HC) and MFS patients’ aortas and then isolated vascular smooth muscle cells (VSMC) from the aortic wall. Results: our findings revealed that MFS aortic tissue samples isolated from the dilated zone of aorta showed higher expression levels of EMMPRIN vs. MFS non-dilated aorta and HC. Interestingly, angiotensin II significantly stimulated CyPA secretion in MFS-derived VSMC (MFS-VSMC). CyPA treatment on MFS-VSMC led to increased levels of EMMPRIN and other MFS-associated pro-fibrotic mediators, such as TGF-β1 and collagen I. These molecules were downregulated by in vitro treatment with CyPA inhibitor MM284. Our results suggest that CyPA/EMMPRIN axis is involved in MFS-related TAA development, since EMMPRIN is upregulated in the dilated zone of MFS patients’ TAA and the inhibition of its ligand, CyPA, downregulated EMMPRIN and MFS-related markers in MFS-VSMC. Conclusions: these insights suggest both a novel detrimental role for CyPA/EMMPRIN axis and its inhibition as a potential therapeutic strategy for MFS-related TAA treatment.
description: Ministry of Health funds (Ricerca Corrente RC2015-2018
DOI: 10.5281/zenodo.4423783
title: Data for "The potential of water security in leveraging Agenda 2030"

description: Data set of the linkages that water security has on other SDGs. The data are based on literature review and final data consists of 120 publications. The linkages are graded from -3 (cancelling) to +3 (indivisible) according Nilsson et al. classification. Prior to data collection, all the reviewers participated in training on SDGs and water security, and on review training before the work. Only papers with a link from water security to SDGs (not vice versa) were included. The resulting subset of 170 papers was then read and evaluated by all the authors independently, with a 10% random overlap on the papers (i.e. 17 of the papers were reviewed at least twice, by different people). During this process, another 50 papers were found to be irrelevant (e.g. due to full paper inaccessibility or questionnaire analysis with no inclusion of SDGs) and were therefore eliminated. The results are thus based on the 120 reviewed papers that we found to be suitable for the analysis. See the journal paper methods for more information, and Supplementary material for author bias analysis. The list of paper ID's can be found rom the journal paper in One Earth. Column "Review" indicates whether the analyzed publication was a review or an original research paper. 1_waterresources_sec = an identified linkage to the water resources dimension of the water security concept 2_human_sec = an identified linkage to the human security dimension of the water security concept 3_national_sec = = an identified linkage to the national security dimension of the water security concept 4_climate_sec = an identified linkage to the climate security dimension of the water security concept 5_energy_sec = an identified linkage to the energy security dimension of the water security concept 6_food_sec = an identified linkage to the food security dimension of the water security concept sdg_counts = the total number of SDGs with reported linkage of water security year = publication year
DOI: 10.5281/zenodo.4423782
title: Data for "The potential of water security in leveraging Agenda 2030"

description: Data set of the linkages that water security has on other SDGs. The data are based on literature review and final data consists of 120 publications. The linkages are graded from -3 (cancelling) to +3 (indivisible) according Nilsson et al. classification. Prior to data collection, all the reviewers participated in training on SDGs and water security, and on review training before the work. Only papers with a link from water security to SDGs (not vice versa) were included. The resulting subset of 170 papers was then read and evaluated by all the authors independently, with a 10% random overlap on the papers (i.e. 17 of the papers were reviewed at least twice, by different people). During this process, another 50 papers were found to be irrelevant (e.g. due to full paper inaccessibility or questionnaire analysis with no inclusion of SDGs) and were therefore eliminated. The results are thus based on the 120 reviewed papers that we found to be suitable for the analysis. See the journal paper methods for more information, and Supplementary material for author bias analysis. The list of paper ID's can be found rom the journal paper in One Earth. Column "Review" indicates whether the analyzed publication was a review or an original research paper. 1_waterresources_sec = an identified linkage to the water resources dimension of the water security concept 2_human_sec = an identified linkage to the human security dimension of the water security concept 3_national_sec = = an identified linkage to the national security dimension of the water security concept 4_climate_sec = an identified linkage to the climate security dimension of the water security concept 5_energy_sec = an identified linkage to the energy security dimension of the water security concept 6_food_sec = an identified linkage to the food security dimension of the water security concept sdg_counts = the total number of SDGs with reported linkage of water security year = publication year
DOI: 10.25824/redu/vmxmhd
title: Images of solar flares in HMI Continuum

description: This dataset contains solar flares in classes B, C, M, and X at HMI Continuum. The images were obtained from the Solar Dynamics Observatory by the Atmospheric Imaging Assembly instrument. Besides, the dataset contains labels to indicate the active regions in each image.
DOI: 10.5523/bris.3gnrgqoy0vmyi2ecnfiuwynnlj
title: Anxiety in Primary Care - qualitative interview dataset

description: This collection consists of 43 qualitative interviews conducted with primary care patients with anxiety, and those who treat it (GPs and IAPT therapists). The interviews were conducted in Bristol and the surrounding area between 2018 and 2019. The interviews provide in-depth information about the views and experiences of the identification, diagnosis and management of anxiety disorders.
DOI: 10.6084/m9.figshare.13951607
title: Data Availability Statement.

description: We analyzed all the samples using a stereomicroscope, Olympus C011 trinocular microscope, coupled with a CCD camera. All the samples were measured and photographed by the Infinity Capture software.<br>The drawn was improved with a drawing table, Parblo A610 – Graphhic tablet using the program ImageJ (Public Dominic). <br>The geographical location of the Araripe Basin was produced using the software QGIS Geographic Information System (version 3.12 – QGIS.org – Public Dominic) considering the coordinate system Datum – SIRGAS 200 from Instituto Brasileiro de Geografia e Estatística (IBGE, Brazil) and Companhia de Pesquisa de Recursos Minerais (CPRM, Brazil). <br>The stratigraphy of the Santana group was drawn with program ImageJ (Public Dominic) to according with stratigraphy on Neumann & Cabreira, 1999 and Valença et al., 2003.<br>
DOI: 10.5281/zenodo.4536806
title: FESOM1.4-REcoM2 1km Fram Strait biogeochemistry

description: Model results from FESOM1.4-REcoM2 in a setup with 1km resolution in Fram Strait. bgc01_fesom_20090491.nc: DIN [mmol/m3] for April to June bgc01_fesom_200907182.nc: DIN [mmol/m3] for July to September bgc06_fesom_20090491.nc: Chl in nanophytoplankton [mg/m3] for April to June bgc06_fesom_200907182.nc: Chl in nanophytoplankton [mg/m3] for July to September bgc15_fesom_20090491.nc: Chl in diatoms [mg/m3] for April to June bgc15_fesom_200907182.nc: Chl in diatoms [mg/m3] for July to September
DOI: 10.5281/zenodo.4536805
title: FESOM1.4-REcoM2 1km Fram Strait biogeochemistry

description: Model results from FESOM1.4-REcoM2 in a setup with 1km resolution in Fram Strait. bgc01_fesom_20090491.nc: DIN [mmol/m3] for April to June bgc01_fesom_200907182.nc: DIN [mmol/m3] for July to September bgc06_fesom_20090491.nc: Chl in nanophytoplankton [mg/m3] for April to June bgc06_fesom_200907182.nc: Chl in nanophytoplankton [mg/m3] for July to September bgc15_fesom_20090491.nc: Chl in diatoms [mg/m3] for April to June bgc15_fesom_200907182.nc: Chl in diatoms [mg/m3] for July to September
DOI: 10.6084/m9.figshare.12459065
title: Dataset - Intraspecific diversity loss in a predator species alters prey community structure and ecosystem functions

description: Loss in intraspecific diversity can alter ecosystem functions, but the underlying mechanisms are still elusive, and intraspecific biodiversity-ecosystem function relationships (iBEFs) have been restrained to primary producers. Here, we manipulated genetic and functional richness of a fish consumer (<i>Phoxinus phoxinus</i>), to test whether iBEFs exist in consumer species, and whether they are more likely sustained by genetic or functional richness. We found that both genotypic and functional richness affected ecosystem functioning, either independently or in interaction. Loss in genotypic richness reduced benthic invertebrate diversity consistently across functional richness treatments, whereas it reduced zooplankton diversity only when functional richness was high. Finally, both losses in genotypic and functional richness altered essential functions (e.g. decomposition) through trophic cascades. We concluded that iBEFs lead to substantial top-down effects on entire food chains. The loss of genotypic richness was similarly prejudicial than the loss of functional richness, probably because it sustains “cryptic” functional diversity.
DOI: 10.6084/m9.figshare.12459065.v6
title: Dataset - Intraspecific diversity loss in a predator species alters prey community structure and ecosystem functions

description: Loss in intraspecific diversity can alter ecosystem functions, but the underlying mechanisms are still elusive, and intraspecific biodiversity-ecosystem function relationships (iBEFs) have been restrained to primary producers. Here, we manipulated genetic and functional richness of a fish consumer (<i>Phoxinus phoxinus</i>), to test whether iBEFs exist in consumer species, and whether they are more likely sustained by genetic or functional richness. We found that both genotypic and functional richness affected ecosystem functioning, either independently or in interaction. Loss in genotypic richness reduced benthic invertebrate diversity consistently across functional richness treatments, whereas it reduced zooplankton diversity only when functional richness was high. Finally, both losses in genotypic and functional richness altered essential functions (e.g. decomposition) through trophic cascades. We concluded that iBEFs lead to substantial top-down effects on entire food chains. The loss of genotypic richness was similarly prejudicial than the loss of functional richness, probably because it sustains “cryptic” functional diversity.
DOI: 10.6084/m9.figshare.13739086.v3
title: Amazonian mammal monitoring using aquatic environmental DNA

description: Run 1<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Run 2<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Run 3<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Run 4<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Run 5<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Run 6<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Run 7<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Run 8<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Run 9<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Run 10<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Run 11<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Run 12<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Run 13<br>Compressed file containing: 1) Forward sequence file; 2) Reverse sequence file.<br><br>Site data<br>A table with 1)Site name, 2)Drainage basin, 3)Latitude, 4)Longitude, 5)Strahler order, 6)Watercourse type, 7)Sampling years, 9)PCR sample name for Replicate 1, 10)PCR sample name for Replicate 2<br>Sites_data.csv<br>MetadataA table with 1)Library name, 2)Drainage basin, 3)PCR sample name, 4)Tag, 5)Reverse primer, 6)Forward primer, 7)Run number <br>Metadata.csv<br>
DOI: 10.5517/ccdc.csd.cc1zkyr7
title: CCDC 1834510: Experimental Crystal Structure Determination

description: Related Article: Serhii Krykun, Magali Allain, Vincent Carre, Frederic Aubriet, Zoia Voitenko, Sebastien Goeb, and Marc Salle|2018|Inorganics|6|44|doi:10.3390/inorganics6020044
DOI: 10.5517/ccdc.csd.cc1zkys8
title: CCDC 1834511: Experimental Crystal Structure Determination

description: Related Article: Serhii Krykun, Magali Allain, Vincent Carre, Frederic Aubriet, Zoia Voitenko, Sebastien Goeb, and Marc Salle|2018|Inorganics|6|44|doi:10.3390/inorganics6020044
DOI: 10.5517/ccdc.csd.cc1zpb77
title: CCDC 1837749: Experimental Crystal Structure Determination

description: Related Article: Rayane El-Berjawi, Piétrick Hudhomme|2018|Dyes Pigm.|159|551|doi:10.1016/j.dyepig.2018.07.037
DOI: 10.5281/zenodo.3947603
title: Appendix 1 to "The Status of Biological Invasions and their Management in South Africa in 2019"—Data sources used

description: For more details see: http://iasreport.sanbi.org.za SANBI and CIB 2020. Appendix 1 to "The Status of Biological Invasions and their Management in South Africa in 2019"—Data sources used. South African National Biodiversity Institute, Kirstenbosch and DSI-NRF Centre of Excellence for Invasion Biology, Stellenbosch. http://dx.doi.org/10.5281/zenodo.3947603
DOI: 10.5281/zenodo.3582007
title: Appendix 1 to "The Status of Biological Invasions and their Management in South Africa in 2019"—Data sources used

description: For more details see: http://iasreport.sanbi.org.za SANBI and CIB 2020. Appendix 1 to "The Status of Biological Invasions and their Management in South Africa in 2019"—Data sources used. South African National Biodiversity Institute, Kirstenbosch and DSI-NRF Centre of Excellence for Invasion Biology, Stellenbosch. http://dx.doi.org/10.5281/zenodo.3947603
DOI: 10.5281/zenodo.7849978
title: Supplementary material - Full-spectrum CARS Microscopy Of Cells And Tissues With Ultrashort White-light Continuum Pulses

description: Supplementary material containing the raw Broadband CARS data presented in the manuscript entitled "Full-spectrum CARS Microscopy Of Cells And Tissues With Ultrashort White-light Continuum Pulses".
DOI: 10.5281/zenodo.7849979
title: Supplementary material - Full-spectrum CARS Microscopy Of Cells And Tissues With Ultrashort White-light Continuum Pulses

description: Supplementary material containing the raw Broadband CARS data presented in the manuscript entitled "Full-spectrum CARS Microscopy Of Cells And Tissues With Ultrashort White-light Continuum Pulses".
DOI: 10.15468/dl.ez229d
title: Occurrence Download

description: A dataset containing 87325 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Betula nana L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 87325 records from 276 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107567-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25288459
title: Alignment, Fungal Planet - Macroconia verruculosa

description: Concatenated alignment of ITS, LSU and tef1a regions.
DOI: 10.15468/dl.v55cep
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Allium stracheyi Baker"
 ]
}

 The dataset includes 51 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107569-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.797thf
title: Occurrence Download

description: A dataset containing 32134 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Monticola saxatilis (Linnaeus, 1766)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 32134 records from 225 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107571-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26869885
title: Supplementary Figures of Identification of heat-tolerant <i>impatiens</i> genotypes manuscript

description: This study aimed to identify <i>Impatiens</i> genotypes that exhibit superior heat tolerance traits and explore how temperature affects plant morphology. The research compared ten <i>Impatiens</i> genotypes under heat stress and normal conditions.
DOI: 10.60629/a3jk-m055
title: The difference in the probability of mat and granule formations between treatments

description: Numerical data to assess the difference in the probability of mat and granule formations by polar cyanobacteria (Microcoleus autumnalis strain and Phormidesmis priestleyi) between treatments (cryoconite, quartz, rocks, water).
DOI: 10.5281/zenodo.13466922
title: CO2SMOS Project_Clostridium autoethanogenum 2,3-BDO - zenodo

description: CO2SMOS’ task 3.1.1 aims at optimizing syngas fermentation process parameters for 2,3-BDO production using improved Clostridium spp. This dataset compiles the fermentation conditions and growth and 2,3-BDO production parameters as well as the chromatograms used to quantify that production
DOI: 10.5281/zenodo.13466923
title: CO2SMOS Project_Clostridium autoethanogenum 2,3-BDO - zenodo

description: CO2SMOS’ task 3.1.1 aims at optimizing syngas fermentation process parameters for 2,3-BDO production using improved Clostridium spp. This dataset compiles the fermentation conditions and growth and 2,3-BDO production parameters as well as the chromatograms used to quantify that production
DOI: 10.15468/dl.6phvkp
title: Occurrence Download

description: A dataset containing 716766 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Betula pendula Roth)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 716766 records from 2726 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0107568-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wnbus2
title: Occurrence Download

description: A dataset containing 205 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Brazil",
 "OccurrenceStatus is Present",
 "TaxonKey is Morganella fuliginea (Berk. & M.A.Curtis) Kreisel & Dring"
 ]
}

 The dataset includes 205 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021926-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eafz4h
title: Occurrence Download

description: A dataset containing 516 species occurrences available in GBIF matching the query:
{
 "and" : [
 "PublishingOrg is one of (d2519a48-9ed7-4e86-8692-338cfc214629, bb646dff-a905-4403-a49b-6d378c2cf0d9)",
 "TaxonKey is Lynx Kerr, 1792"
 ]
}

 The dataset includes 516 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021925-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5517/ccdc.csd.cc21j5g7
title: CCDC 1892378: Experimental Crystal Structure Determination

description: Related Article: Vijay Kumar Maka, Swati Jindal, Jarugu Narasimha Moorthy|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc21j5rj
title: CCDC 1892387: Experimental Crystal Structure Determination

description: Related Article: Vijay Kumar Maka, Swati Jindal, Jarugu Narasimha Moorthy|2024|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc26zc9w
title: CCDC 2054968: Experimental Crystal Structure Determination

description: Related Article: Elif Bulat, Nurcan Acar, Senem Akkoç, Ertuğrul Gazi Sağlam, Remziye Aysun Kepekçi, Celal Tuğrul Zeyrek, Yunus Zorlu|2025|J.Mol.Struct.|1335|142011|doi:10.1016/j.molstruc.2025.142011
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.24941694
title: XFJ_earthquakes_relocations.dat

description: This is the supplymentory file of the article <i>Source parameters and Stress triggering of 2023 M≥4 earthquakes sequence in Heyuan, Guangdong, </i>which contains the result of earthquake relocations in the study. The first column is event time, the second, third and forth column is longitude, latitude and depth of earthquakes, the fifth column is the RMS residual for catalog data.
DOI: 10.5517/ccdc.csd.cc29gwrf
title: CCDC 2129475: Experimental Crystal Structure Determination

description: Related Article: Elif Bulat, Nurcan Acar, Senem Akkoç, Ertuğrul Gazi Sağlam, Remziye Aysun Kepekçi, Celal Tuğrul Zeyrek, Yunus Zorlu|2025|J.Mol.Struct.|1335|142011|doi:10.1016/j.molstruc.2025.142011
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.