cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.7519197
title: MUSES Fractional Vegetation Coverage (FVC) 8-Day Global 250m SIN Grid in 2013 (185–361)

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global FVC product at 250m spatial resolution and 8-day temporal resolution. The MUSES FVC product is provided on a Sinusoidal grid and spans from 2000 to 2019 (continuously updated). It was generated from the MUSES LAI product at 250m resolution and other ancillary information using the complement to unity of the transmittance of light through the entire canopy in the nadir viewing direction (Xiao <em>et al</em>., 2016). The MUSES FVC values are physically consistent with the corresponding MUSES LAI values. The MUSES FVC product is spatially complete and temporally continuous. This dataset is the MUSES FVC product in 2013 (185–361). <em>Please <strong>click here</strong> to download the MUSES FVC product <strong>in 2013 (001–177)</strong> and <em><strong>click here</strong> to download the MUSES FVC produ</em>ct <strong>in 2014 (001–177)</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2013 (185–361) Spatial Resolution: 250m Temporal Resolution: 8 days Projection: Sinusoidal Data Format: HDF Scale: 0.01 Valid Range: 0 – 100 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et a</em>l. (2016). Estimating the Fractional Vegetation Cover from GLASS Leaf Area Index Product. <em>Remote Sensing</em>, 8, 337. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).
DOI: 10.5281/zenodo.7519196
title: MUSES Fractional Vegetation Coverage (FVC) 8-Day Global 250m SIN Grid in 2013 (185–361)

description: The MUltiscale Satellite remotE Sensing (MUSES) product suite includes products with different spatial and temporal resolutions for parameters such as Normalized Difference Vegetation Index (NDVI), Near-Infrared Reflectance of Vegetation (NIRv), Leaf Area Index (LAI), Fraction of Absorbed Photosynthetically Active Radiation (FAPAR), Fractional Vegetation Coverage (FVC), Gross Primary Production (GPP), Net Primary Production (NPP). For more information about the MUSES products, please refer to this website (https://muses.bnu.edu.cn/). This dataset is the MUSES global FVC product at 250m spatial resolution and 8-day temporal resolution. The MUSES FVC product is provided on a Sinusoidal grid and spans from 2000 to 2019 (continuously updated). It was generated from the MUSES LAI product at 250m resolution and other ancillary information using the complement to unity of the transmittance of light through the entire canopy in the nadir viewing direction (Xiao <em>et al</em>., 2016). The MUSES FVC values are physically consistent with the corresponding MUSES LAI values. The MUSES FVC product is spatially complete and temporally continuous. This dataset is the MUSES FVC product in 2013 (185–361). <em>Please <strong>click here</strong> to download the MUSES FVC product <strong>in 2013 (001–177)</strong> and <em><strong>click here</strong> to download the MUSES FVC produ</em>ct <strong>in 2014 (001–177)</strong></em>. <strong>Dataset Characteristics:</strong> Spatial Coverage: Global Temporal Coverage: 2013 (185–361) Spatial Resolution: 250m Temporal Resolution: 8 days Projection: Sinusoidal Data Format: HDF Scale: 0.01 Valid Range: 0 – 100 <strong>Citation </strong>(Please cite this paper whenever these data are used)<strong>:</strong> Xiao Zhiqiang, <em>et a</em>l. (2016). Estimating the Fractional Vegetation Cover from GLASS Leaf Area Index Product. <em>Remote Sensing</em>, 8, 337. If you have any questions, please contact Prof. Zhiqiang Xiao (zhqxiao@bnu.edu.cn).
DOI: 10.23728/b2share.1b97449043954b38b7637ffa4911631f
title: Three years of soil moisture observations by a dense cosmic-ray neutron sensing cluster at an agricultural research site in north-east Germany

description: Dataset accompanying the publication "Three years of soil moisture observations by a dense cosmic-ray neutron sensing cluster at an agricultural research site in north-east Germany" (ESSD, 2023 subm., https://doi.org/10.5194/essd-2023-19) The publication contains records of cosmic ray neutron sensing (CRNS - stationary, roving), soil moisture (FDR, profile probes, gravimetric, GNSS-R), soil properties (bulk density, organic matter, texture, soil hydraulic parameters), snow parameters (depth, density, areal cover), vegetation / biomass surveys, crops cycles / yields and information on irrigation schemes . An overview of the dataset as well as further technical details are provided in the README.pdf file.
description: cosmic ray neutron sensing (CRNS - stationary, roving), soil moisture (FDR, profile probes, gravimetric, tensiometers, GNSS reflectometry), hydro-gravimetry, soil properties (bulk density, organic matter, texture, hydraulic parameters), vegetation / biomass surveys (weighing, allometry), snow depth (ultrasonic gauge, manual), snow cover (UAV imagery), snow density (manual)
DOI: 10.6084/m9.figshare.21789110.v1
title: Paper Data

description: Paper Data For "Identification of ACHE as the Hub Gene targeting Solasonine Associated with NSCLC Using Integrated Bioinformatics Analysis"
DOI: 10.5281/zenodo.7296682
title: Genome-wide SNP discovery in native American and Hungarian Robinia pseudoacacia genotypes using next-generation double-digest restriction-site-associated DNA sequencing (ddRAD-Seq)

description: Initial filtered ddRADseq dataset with highly variable SNP markers from native American and Hungarian <em>Robinia pseudoacacia</em> L. individuals
DOI: 10.5281/zenodo.7296683
title: Genome-wide SNP discovery in native American and Hungarian Robinia pseudoacacia genotypes using next-generation double-digest restriction-site-associated DNA sequencing (ddRAD-Seq)

description: Initial filtered ddRADseq dataset with highly variable SNP markers from native American and Hungarian <em>Robinia pseudoacacia</em> L. individuals
DOI: 10.5281/zenodo.7525264
title: Genome-wide SNP discovery in native American and Hungarian Robinia pseudoacacia genotypes using next-generation double-digest restriction-site-associated DNA sequencing (ddRAD-Seq)

description: Initial filtered ddRADseq dataset with highly variable SNP markers from native American and Hungarian <em>Robinia pseudoacacia</em> L. individuals
DOI: 10.35078/ysagst
title: Replication Data for: Ficha epidemiológica de localidade: Distrito: Caratinga | Município: Senhora de Oliveira

description: Levantamento Triatomínico com operações de campo ocorridas em Minas Gerais pela Superintendência de Campanhas de Saúde Pública (SUCAM) e FUNASA (Fundação Nacional de Saúde), no período de 1979 a 1999, objetivando a busca da presença de vetores da doença de Chagas ou de vestígios dessa presença. A partir dela são orientadas as operações com inseticida (pt) Triatomine survey with field operations carried out in Minas Gerais by the Public Health Campaigns Superintendence (SUCAM) and FUNASA (National Health Foundation), from 1979 to 1999, aiming to search for the presence of Chagas disease vectors or traces of that presence. From it, operations with insecticide are guided (en) Encuesta de triatominos con operaciones de campo realizada en Minas Gerais por la Superintendencia de Campañas de Salud Pública (SUCAM) y FUNASA (Fundación Nacional de Salud), de 1979 a 1999, con el objetivo de buscar la presencia de vectores de la enfermedad de Chagas o rastros de esa presencia. Desde ella se orientan las operaciones con insecticida (es)
DOI: 10.5281/zenodo.7390878
title: Lathyrus sativus LS007 genome assembly and annotation Rbp1.0

description: Genome assembly of grass pea (<em>Lathyrus sativus</em> L.) genotype LS007, assembled from PromethION nanopore data and polished using Illumina HiSeq PE data. The assembly was annotated using the mikado-minos pipeline developed by the Earlham Institute. Also included is a separate annotation track for repeat sequences produced using the DANTE pipleline. For any questions regarding this dataset, contact peter.emmrich@jic.ac.uk Note: ctg14433 has been manually corrected based on sequenced amplicon data. Files have been updated accordingly. <strong>Assembly files:</strong> Lsativus_LS007_Rbp1.0.7z - compressed complete assembly without scaffolding. The annotation refers to this assembly Rbp_9 largest HiC scaffolds.7z - compressed fasta file of the largest 9 scaffolds following HiC scaffolding Lsat_LS007_Rbp_chloroplast.fasta - fasta file of the complete LS007 chloroplast genome Lsat_LS007_Rbp_mitochondrion.fasta - fasta file of the complete LS007 mitochondrial genome <strong>Annotation tracks:</strong> LATSA3860_EIv1.0.annotation.gff3 DANTE_transposable_element_protein_domains.gff3 Full_length_LTR_retrotransposons.gff3 Repeat_annotation_classI_classII_satellites.gff3 <strong>Annotation FASTA files:</strong> LATSA3860_EIv1.0.annotation.gff3.cds.fasta LATSA3860_EIv1.0.annotation.gff3.cdna.fasta LATSA3860_EIv1.0.annotation.gff3.pep.fasta <strong>Summaries and statistics:</strong> LATSA3860_EIv1.0.annotation.gff3.final_table.tsv LATSA3860_EIv1.0.annotation.gff3.mikado_stats.txt LATSA3860_EIv1.0.annotation.gff3.biotype_conf.summary LATSA3860_EIv1.0.annotation.gff3.final_table.tsv LATSA3860_EIv1.0.annotation.gff3.pep.fasta.functional_annotation.tsv NOT_UPDATED_LATSA3860_EIv1.0.annotation.gff3.metrics.tsv * Blobtools_passed_contigs.txt - list of all contigs of the assembly that pass the BlobTools filter (Streptophyta, 20-100x coverage, &gt;50 kbp) *this file has not been updated to reflect the correction to ctg14433
DOI: 10.5281/zenodo.6868912
title: Lathyrus sativus LS007 genome assembly and annotation Rbp1.0

description: Genome assembly of grass pea (<em>Lathyrus sativus</em> L.) genotype LS007, assembled from PromethION nanopore data and polished using Illumina HiSeq PE data. The assembly was annotated using the mikado-minos pipeline developed by the Earlham Institute. Also included is a separate annotation track for repeat sequences produced using the DANTE pipleline. For any questions regarding this dataset, contact peter.emmrich@jic.ac.uk Note: ctg14433 has been manually corrected based on sequenced amplicon data. Files have been updated accordingly. <strong>Assembly files:</strong> Lsativus_LS007_Rbp1.0.7z - compressed complete assembly without scaffolding. The annotation refers to this assembly Rbp_9 largest HiC scaffolds.7z - compressed fasta file of the largest 9 scaffolds following HiC scaffolding Lsat_LS007_Rbp_chloroplast.fasta - fasta file of the complete LS007 chloroplast genome Lsat_LS007_Rbp_mitochondrion.fasta - fasta file of the complete LS007 mitochondrial genome <strong>Annotation tracks:</strong> LATSA3860_EIv1.0.annotation.gff3 DANTE_transposable_element_protein_domains.gff3 Full_length_LTR_retrotransposons.gff3 Repeat_annotation_classI_classII_satellites.gff3 <strong>Annotation FASTA files:</strong> LATSA3860_EIv1.0.annotation.gff3.cds.fasta LATSA3860_EIv1.0.annotation.gff3.cdna.fasta LATSA3860_EIv1.0.annotation.gff3.pep.fasta <strong>Summaries and statistics:</strong> LATSA3860_EIv1.0.annotation.gff3.final_table.tsv LATSA3860_EIv1.0.annotation.gff3.mikado_stats.txt LATSA3860_EIv1.0.annotation.gff3.biotype_conf.summary LATSA3860_EIv1.0.annotation.gff3.final_table.tsv LATSA3860_EIv1.0.annotation.gff3.pep.fasta.functional_annotation.tsv NOT_UPDATED_LATSA3860_EIv1.0.annotation.gff3.metrics.tsv * Blobtools_passed_contigs.txt - list of all contigs of the assembly that pass the BlobTools filter (Streptophyta, 20-100x coverage, &gt;50 kbp) *this file has not been updated to reflect the correction to ctg14433
DOI: 10.34740/kaggle/dsv/4838827
title: COVID Vaccination in World (updated daily)
DOI: 10.6084/m9.figshare.21641390
title: Konecna_BM_timebudget_females

description: The data file includes behavioral categories recorded using focal instantaneous sampling in 2 minutes intervals. The data were used for GLMMs and interindividual comparisons of the time budget in Barbary macaque females. The results published in the paper Konečná et al. <strong>Effect of maternal status on time budget in female Barbary macaques (</strong><em><strong>Macaca sylvanus</strong></em><strong>).</strong>
DOI: 10.6084/m9.figshare.21641390.v1
title: Konecna_BM_timebudget_females

description: The data file includes behavioral categories recorded using focal instantaneous sampling in 2 minutes intervals. The data were used for GLMMs and interindividual comparisons of the time budget in Barbary macaque females. The results published in the paper Konečná et al. <strong>Effect of maternal status on time budget in female Barbary macaques (</strong><em><strong>Macaca sylvanus</strong></em><strong>).</strong>
DOI: 10.35078/hqcobo
title: Replication Data for: Ficha epidemiológica de localidade: Distrito: Caratinga | Município: Piedade de Ponte Nova

description: Levantamento Triatomínico com operações de campo ocorridas em Minas Gerais pela Superintendência de Campanhas de Saúde Pública (SUCAM) e FUNASA (Fundação Nacional de Saúde), no período de 1979 a 1999, objetivando a busca da presença de vetores da doença de Chagas ou de vestígios dessa presença. A partir dela são orientadas as operações com inseticida (pt) Triatomine survey with field operations carried out in Minas Gerais by the Public Health Campaigns Superintendence (SUCAM) and FUNASA (National Health Foundation), from 1979 to 1999, aiming to search for the presence of Chagas disease vectors or traces of that presence. From it, operations with insecticide are guided (en) Encuesta de triatominos con operaciones de campo realizada en Minas Gerais por la Superintendencia de Campañas de Salud Pública (SUCAM) y FUNASA (Fundación Nacional de Salud), de 1979 a 1999, con el objetivo de buscar la presencia de vectores de la enfermedad de Chagas o rastros de esa presencia. Desde ella se orientan las operaciones con insecticida (es)
DOI: 10.23728/b2share.7fc7d1b0560a4d25a8c05972543f12a1
title: Three years of soil moisture observations by a dense cosmic-ray neutron sensing cluster at an agricultural research site in north-east Germany

description: Dataset accompanying the publication "Three years of soil moisture observations by a dense cosmic-ray neutron sensing cluster at an agricultural research site in north-east Germany" (ESSD, 2023 subm., https://doi.org/10.5194/essd-2023-19) The publication contains records of cosmic ray neutron sensing (CRNS - stationary, roving), soil moisture (FDR, profile probes, gravimetric, GNSS-R), soil properties (bulk density, organic matter, texture, soil hydraulic parameters), snow parameters (depth, density, areal cover), vegetation / biomass surveys, crops cycles / yields and information on irrigation schemes . An overview of the dataset as well as further technical details are provided in the README.pdf file.
description: cosmic ray neutron sensing (CRNS - stationary, roving), soil moisture (FDR, profile probes, gravimetric, tensiometers, GNSS reflectometry), hydro-gravimetry, soil properties (bulk density, organic matter, texture, hydraulic parameters), vegetation / biomass surveys (weighing, allometry), snow depth (ultrasonic gauge, manual), snow cover (UAV imagery), snow density (manual)
DOI: 10.6084/m9.figshare.21740534.v1
title: Original data - Ross et al. Horse Housing on Prince Edward Island, Canada: Attitudes and experiences related to keeping horses outdoors and in groups

description: Raw data
DOI: 10.5281/zenodo.7525298
title: Dataset related to: Low Nephron Number Induced by Maternal Protein Restriction Is Prevented by Nicotinamide Riboside Supplementation Depending on Sirtuin 3 Activation

description: The files contain all the dataset included in the manuscript divided by figures. For each figure, individual tabs indicate data from different figure panels. <strong>Abstract</strong> A reduced nephron number at birth, due to critical gestational conditions, including maternal malnutrition, is associated with the risk of developing hypertension and chronic kidney disease in adulthood. No interventions are currently available to augment nephron number. We have recently shown that sirtuin 3 (SIRT3) has an important role in dictating proper nephron endowment. The present study explored whether SIRT3 stimulation, by means of supplementation with nicotinamide riboside (NR), a precursor of the SIRT3 co-substrate nicotinamide adenine dinucleotide (NAD<sup>+</sup>), was able to improve nephron number in a murine model of a low protein (LP) diet. Our findings show that reduced nephron number in newborn mice (day 1) born to mothers fed a LP diet was associated with impaired renal SIRT3 expression, which was restored through supplementation with NR. Glomerular podocyte density, as well as the rarefaction of renal capillaries, also improved through NR administration. In mechanistic terms, the restoration of SIRT3 expression through NR was mediated by the induction of proliferator-activated receptor γ (PPARγ) coactivator-1α (PGC-1α). Moreover, NR restored SIRT3 activity, as shown by the reduction of the acetylation of optic atrophy 1 (OPA1) and superoxide dismutase 2 (SOD2), which resulted in improved mitochondrial morphology and protection against oxidative damage in mice born to mothers fed the LP diet. Our results provide evidence that it is feasible to prevent nephron mass shortage at birth through SIRT3 boosting during nephrogenesis, thus providing a therapeutic option to possibly limit the long-term sequelae of reduced nephron number in adulthood.
description: {"references": ["Pezzotta A, Perico L, Morigi M, Corna D, Locatelli M, Zoja C, Benigni A, Remuzzi G, Imberti B. Low Nephron Number Induced by Maternal Protein Restriction Is Prevented by Nicotinamide Riboside Supplementation Depending on Sirtuin 3 Activation. Cells. 2022 Oct 21;11(20):3316. doi: 10.3390/cells11203316. PMID: 36291179; PMCID: PMC9600228."]}
DOI: 10.5281/zenodo.7525297
title: Dataset related to: Low Nephron Number Induced by Maternal Protein Restriction Is Prevented by Nicotinamide Riboside Supplementation Depending on Sirtuin 3 Activation

description: The files contain all the dataset included in the manuscript divided by figures. For each figure, individual tabs indicate data from different figure panels. <strong>Abstract</strong> A reduced nephron number at birth, due to critical gestational conditions, including maternal malnutrition, is associated with the risk of developing hypertension and chronic kidney disease in adulthood. No interventions are currently available to augment nephron number. We have recently shown that sirtuin 3 (SIRT3) has an important role in dictating proper nephron endowment. The present study explored whether SIRT3 stimulation, by means of supplementation with nicotinamide riboside (NR), a precursor of the SIRT3 co-substrate nicotinamide adenine dinucleotide (NAD<sup>+</sup>), was able to improve nephron number in a murine model of a low protein (LP) diet. Our findings show that reduced nephron number in newborn mice (day 1) born to mothers fed a LP diet was associated with impaired renal SIRT3 expression, which was restored through supplementation with NR. Glomerular podocyte density, as well as the rarefaction of renal capillaries, also improved through NR administration. In mechanistic terms, the restoration of SIRT3 expression through NR was mediated by the induction of proliferator-activated receptor γ (PPARγ) coactivator-1α (PGC-1α). Moreover, NR restored SIRT3 activity, as shown by the reduction of the acetylation of optic atrophy 1 (OPA1) and superoxide dismutase 2 (SOD2), which resulted in improved mitochondrial morphology and protection against oxidative damage in mice born to mothers fed the LP diet. Our results provide evidence that it is feasible to prevent nephron mass shortage at birth through SIRT3 boosting during nephrogenesis, thus providing a therapeutic option to possibly limit the long-term sequelae of reduced nephron number in adulthood.
description: {"references": ["Pezzotta A, Perico L, Morigi M, Corna D, Locatelli M, Zoja C, Benigni A, Remuzzi G, Imberti B. Low Nephron Number Induced by Maternal Protein Restriction Is Prevented by Nicotinamide Riboside Supplementation Depending on Sirtuin 3 Activation. Cells. 2022 Oct 21;11(20):3316. doi: 10.3390/cells11203316. PMID: 36291179; PMCID: PMC9600228."]}
DOI: 10.6084/m9.figshare.21740534.v2
title: Original data - Ross et al. Horse Housing on Prince Edward Island, Canada: Attitudes and experiences related to keeping horses outdoors and in groups

description: Raw data
DOI: 10.6084/m9.figshare.21740534.v3
title: Original data - Ross et al. Horse Housing on Prince Edward Island, Canada: Attitudes and experiences related to keeping horses outdoors and in groups

description: Raw data
DOI: 10.6084/m9.figshare.20122733
title: RePP Africa

description: The Excel file consitsts of eleven sheets containing one information sheet on the general structure of the file and the sheets included, one overarching sheet with metadata and, for each of the three RE resources, three specific sheets that provide (1) the RE specific metadata, (2) the respective dataset, and (3) the data sources.
DOI: 10.6084/m9.figshare.20122733.v1
title: RePP Africa

description: The Excel file consitsts of eleven sheets containing one information sheet on the general structure of the file and the sheets included, one overarching sheet with metadata and, for each of the three RE resources, three specific sheets that provide (1) the RE specific metadata, (2) the respective dataset, and (3) the data sources.
DOI: 10.25416/edgehill.21861651
title: Open Data

description: Mental health and wellbeing of further and higher education students returning to face-to-face learning after Covid-19 restrictions
DOI: 10.25416/edgehill.21861651.v1
title: Open Data

description: Mental health and wellbeing of further and higher education students returning to face-to-face learning after Covid-19 restrictions
DOI: 10.5281/zenodo.7525088
title: Quartet of familiar males – 17q21.31 Del mouse strain – 2 WT + 2 Del/+ - M2

description: We monitored the individual and social behaviours of each quartet of mice over three days and nights in the Live Mouse Tracker system (LMT, plugin 931; de Chaumont et al. 2019 Nat. Biomed. Engin.). This system tracks individually mice living in a group over several days and nights and extracts automatically the number, total duration and mean duration of more than thirty behavioural events describing the posture of the mouse, the types of social contacts, the dynamic social approach and escapes and complex social groupings (see de Chaumont et al. 2019 Nat. Biomed. Engin.). In this system, the four mice (10-14 weeks of age; 2 WT mice and 2 Del/+ mice) from the same housing cage (housed together from weaning on) were left undisturbed for 71 hours in a large transparent Plexiglas cage (50 x 50 x 40 cm), with fresh bedding, a house (width: 100 mm, depth: 75 mm, height: 40 mm) in red Plexiglas, 6 dental cotton rolls as well as food and water ad libitum. Light/dark cycle and temperature conditions were similar to those of the housing room (12/12h light/dark, lights on at 07:00 AM, 100 lux when the lights were on). Each recording session started between 03:00 and 04:00 PM. At the end of the session, mice were placed back in their home cage and the LMT setup was cleaned with soap water and dried with paper towels. The upload includes the sqlite database from LMT (processed).