cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/jkmbpfgp4k.2
title: Data for: Influence of spatial structure on protein damage susceptibility – A bioinformatics approach

description: The supplementary data contains the folders: data: - data plus description after step 5 in Suppl. 1 - the multimodels.txt from cloud2, created by the multimodels.macro - a TEST.txt file with specific sequences that can be used to see where they score; the scorer_3D.pl looks specificaly for them and gives them out on the console output: - all the final output data for all the different parts analysed, that can be used for own analysis programs: - the perl programs that were used to produce this work R data and script: - the script to calculate the statistics in the supplement and to draw the violin-boxplot - the R workspace with the read in data scripts for Cloud2: - the scripts that were used in Cloud2 to get the specific output Additionally there is the file 'amino_acid_distribution.ods' which contains the diagrams, that were used in the publication, and their calculations. Finaly there is the file 'TopBot100.ods' which contains the best and worst 100 entries for every analysis (see Suppl. 7). For further explanation of the data please refer to the supplement.
DOI: 10.17632/gcp66ch34c.4
title: Functional and transcriptional adaptations of blood monocytes recruited to the cystic fibrosis microenvironment in vitro.

description: Cystic fibrosis (CF) lung disease is dominated by the recruitment of myeloid cells (neutrophils and monocytes) from blood, which fail to clear the lung of colonizing microbes. In prior in vitro studies, we showed that blood neutrophils migrated through well-differentiated lung epithelium into CF airway fluid supernatant (ASN) mimic the dysfunction of CF airway neutrophils in vivo, including decreased bactericidal activity despite an increased metabolism. Here, we hypothesized that, similar to neutrophils, blood monocytes would also undergo significant adaptations upon recruitment to CFASN. To test this hypothesis, primary human blood monocytes were transmigrated in our in vitro model into ASN from healthy control (HC) or CF subjects to mimic in vivo recruitment to normal or CF airways, respectively. Surface phenotype, metabolic and bacterial killing activities, and transcriptomic profile by RNA sequencing (RNASeq), were quantified post-transmigration. Unlike neutrophils, monocytes were not metabolically activated nor showed broad differences in activation and scavenger receptor expression upon recruitment to CFASN compared to HCASN. However, monocytes recruited to CFASN showed decreased bactericidal activity. RNASeq analysis showed large effects of transmigration on monocyte RNA profile with differences between CFASN and HCASN conditions, including in immune and antiviral signaling. While monocytes undergo qualitatively different adaptations from those seen in neutrophils upon recruitment to the CF airway microenvironment, their bactericidal activity is also dysregulated, which could explain why they also fail to protect CF airways from infection.
DOI: 10.17632/dhnh9t2szj.2
title: The responsiveness of Motor Function Measure-Chinese version (MFM 32-CN) in children and adolescents with Duchenne muscular dystrophy

description: Abstract Objectives: This study aims to examine the responsiveness of the Motor Function Measure Chinese version (MFM 32-CN) in children and adolescents with Duchene muscular dystrophy (DMD). Methods: 148 participants were consecutively recruited. Assessments, including the Brooke and Vignos scales, the MFM 32-CN and the Clinical Global Impression-Severity scale (CGIS), were performed during their first visit (T1) and at six- (T2) and twelve-month (T3) follow up time points. The relationship between MFM scores and age was studied. The standardized response means (SRMs) were used to determine the instrument’s responsiveness. Results: It was found that changes in MFM total score showed significant deterioration over time: -4.46±3.10 points per six months and -9.78±4.79 points per year. The MFM total score (SRM: 1.30 to 3.76), D1 (SRM: 1.10 to 3.20) and D2 (SRM: 0.94 to 2.31) subtotal scores demonstrated substantially high responsiveness at both T2 and T3. D1 presented the highest responsiveness (SRM: 1.25 to 3.20) among patients with ambulation and within a mild to moderate range of severity. By contrast, D2 showed the highest responsiveness (SRM: 1.43 to 2.31) in the non-ambulant and severe groups. The responsiveness of D3 was not satisfactory (SRM: 0.23 to 0.56) in the general sample, but high (SRM: 0.82 to 1.86) in non-ambulant and severe patients. Conclusions: Motor function of individuals with DMD deteriorated rapidly and dramatically during childhood and early adolescence. The MFM-32 Chinese version is a highly responsive tool in detecting changes in motor function over time in children and adolescents with DMD.
DOI: 10.17632/hzjsr56fkb.2
title: Isometric Plantarflexion Moment Prediction SVR

description: 1. Data collection during isometric ankle joint plantarflexion at 5 different postures, incluidng sEMG, ultrasound imaging video, joint moment measurements from nine able-bodied participants. 2. sEMG signal time-domain features extraction and ultrasound imaging structural and functional features extraction results. 3. Correlation analysis results between each neuromuscular feature and measured ankle joint moment. 4. Illustrative support vector machine regresion model training and prediction code and results, including the saved results in .mat files, root mean square error and R-square values between trained and measured joint moments, as well as between predicted and measured joint moment. 5. SVR regression models training and prediction results summary for individual participant.
DOI: 10.17632/dmnxczrg5k.2
title: LINF_090019000

description: hypothetical protein - conserved; Leishmania infantum
DOI: 10.17632/46vyvgtwph.2
title: LINF_090020900

description: histone H2B; Leishmania infantum
DOI: 10.17632/95fntzd6gw.2
title: LINF_090020400

description: PPPDE putative peptidase domain containing protein | PPPDE2; Leishmania infantum
DOI: 10.17632/cfyhsy6rr5.2
title: Data for XRD, SEM-EDX, FT-IR, and XPS analyses for waste foundry dust before and after batch sorption tests using As(III) and Cr(VI) aqueous solutions

description: Waste foundry dust (WFD), an industrial by-product can be used as a reactive material to treat wastewater. XRD, SEM-EDX, FT-IR, and XPS analyses were performed on WFD samples, obtained before and after the batch sorption tests using As(III) and Cr(VI) aqueous solutions under various conditions (i.e., initial pH and reaction time) for determining As(III) and Cr(VI) removal characteristics. XRD analysis was conducted to determine the change in the mineral phase of the samples after the batch sorption tests. Quartz (SiO2), microcline (KAlSi3O8), and magnetite (Fe3O4) were observed for all samples. For the FT-IR analysis, in all samples, peaks were observed at 585 (Fe-O), 773 (Si-O), 1010 (Si-O-Si), 1560 (C=C), 2115 (C=C), 2340-2372 (O=C=O), and 2650-2700 (C-H) cm-1. The peaks above 1560 cm-1 are related to organic matters in the WFD, and peaks below 1010 cm-1 are related to quartz, microcline, and magnetite. For the SEM-EDX analysis, the major elements detected in the WFD samples before and after the batch sorption tests were Si, Al, and Fe. In addition, a small amount of As and Cr were detected in A-and B-series samples, respectively. For the XPS analysis, 1s peaks for C-C, C-O, and C=O were observed at a binding energy of 284.8, 286.0, and 287.0 eV. Only SiO2 peak for Si 2p was observed at 103.8 eV. Oxygen in all samples was mainly present in the form of SiO2, Fe-O, and M-OH.
DOI: 10.17632/ppvf77zr6s.2
title: Méndez-Rodríguez_etal_Pteronotus_database
DOI: 10.17632/sjxcfj5kdx.2
title: LINF_090018500

description: mitochondrial RNA binding protein 2 | KMRP2; Leishmania infantum
DOI: 10.17632/h6pgswr27h.2
title: HyPR-MS for multiplexed discovery of MALAT1, NEAT1, and NORAD lncRNA protein interactomes

description: This data set includes the mass spectrometric raw files for all capture, scrambled, and input samples used for the manuscript.
DOI: 10.17632/tc7xmjbmfw.4
title: Changes in resting-state Functional Connectivity of Cerebellum in Alzheimer’s disease and amnestic Mild Cognitive Impairment: a case control study

description: The structral after preprocessing with SUIT in normal controls, amnestic mild cognitive impairment and Alzheimer's disease. The functional data could can be obtained by contacting the author, dantao.peng@outlook.com
DOI: 10.17632/jxdg9kgnxf.2
title: Linear epitope landscape of the SARS-CoV-2 Spike protein constructed from 1,051 COVID-19 patients-A study of Yang Li et al

description: This dataset includes the Table S1-S7 of the study.
DOI: 10.17632/sthf63389g.2
title: DATABANK-OBSTETRICS-COVID19-BRAZIL

description: This database contains secondary brazilian data from the Influenza Epidemiological Surveillance Information System, SIVEP-Gripe (Sistema de Informação de Vigilância Epidemiológica da Gripe). and contains information on cases and deaths of women between 15 and 49 years old, including pregnant or postpartum women with ARSD/COVID-19/other etiology .
DOI: 10.17632/bmsdp87zrp.2
title: LINF_090020500

description: PPPDE putative peptidase domain containing protein | PPPDE1; Leishmania infantum
DOI: 10.17632/wv3xff4y8g.2
title: Supplemental figures and video

description: Supplemental figure 1: Pedunculated earlobe keloid (preoperative) Supplemental figure 2: Post keloid excision (posterior aspect) Supplemental figure 3: Post keloid excision with intravenous cannula in situ (anterior aspect) Supplemental figure 4: Post split earlobe repair with intravenous cannula in situ (anterior aspect) Supplemental video 1: Earlobe keloid excision with intraoperative placement of intravenous cannula for maintaining the patency of ear-piercing hole
DOI: 10.17632/n7nmt7yyft.2
title: JDS19389- Supplemental Table 2

description: Supplemental Table 2. Crude frequency of postpartum diseases in a pen-level controlled trial of a negative DCAD diet for close-up dry cows.
DOI: 10.17632/nfgb92wh72.3
title: IRS Non Profit Financial Data and Political Partisanship

description: We classified the political ideology of all non-profits in the public IRS 990 Form dataset by using a Bayesian classification of their self-reported mission statements, using a classifier trained on the political speeches of members of Congress.
DOI: 10.17632/92s86j8hny.4
title: Test Validation of Extension-Twisting Coupled Laminates with Matched Orthotropic Stiffness.

description: This dataset contains raw and processed test and simulation data that underpins an experimental validation study for three classes of coupled laminate with matching Extension-Twisting coupling. The designs have matching orthotropic stiffness, in both extension and bending, and have been chosen specifically to investigate the influence of mechanical Extension-Shearing and/or Bending-Twisting on the performance of Extension-Twisting coupled designs under axial tension loads. All designs are Hygro-Thermally Curvature Stable (HTCS) or warp-free. An Electronic Annex to the article is also provided, which contains specimen data and Abaqus input files from which the simulations can be reproduced. A video of the MTS Bionix 25kN/250Nm Axial/Torsional test machine demonstrates the complex kinematics of the mechanically coupled composite specimen, in which twisting is induced as a result of an applied axial tension load. Supplementary Note: It was not thought possible that zero Extension-Shearing coupled compliances, a16 and a26, could be achieved in the presence of Bending-Twisting coupled stiffnesses, when matching both Extension-Twisting (and inseparable Shearing-Bending) coupled stiffnesses and orthotropic Extensional and Bending stiffnesses. However, this was due to an oversight whilst interrogating the laminate databases. These designs have therefore been provided in a further supplement to the electronic annex to this article, since they do not affect any of the conclusions drawn.
DOI: 10.17632/k3rwyr3wy2.2
title: JDS19389- Supplemental Table1

description: Supplemental Table 1. Description of the numbers of observational units (cows) per experimental unit (pen-treatment) in a cluster randomized controlled trial of controlled trial of a negative DCAD diet for close-up dry cows.
DOI: 10.17632/zr7g8kstwz.2
title: Chemical compounds identified in Green rose (Rosaveridiflora sp) and its respective concentration and retention time at LC-QTOF-MS

description: Acquisition of data is possible from Liquid chromatography-mass spectrometry (LC-MS) analysis on green rose (Rosaveridiflora sp) extract
DOI: 10.17632/jd48mk925f.2
title: Assembled transcriptome sequences of Miscanthus sinensis

description: Miscanthus-Unigene.fa: This unigene file was based on an integrated analyses of PacBio- and Illumina-based transcriptomic data, which uncovered 408,801 non-redundant transcripts with an average length of 1,685 bp. This file is associated with the work by Wang et al. submitted to the journal BMC Geomics.
DOI: 10.17632/ms4bkp33p8.2
title: covid data

description: covid data
DOI: 10.17632/54rxxvrwxr.2
title: GSK3 inhibitor ameliorates steatosis through the modulation of mitochondrial dysfunction in hepatocytes of obese patients. Yaqiong Li et al
DOI: 10.17632/7gbxfg7jy5.2
title: ZF Sentinels 2021

description: Wild zebrafish sentinels: biological monitoring of pollution using behavior and morphology
DOI: 10.17632/y58rrk2nj2.2
title: Human Ability to Determine Affective States in Domestic Horse Vocalizations

description: Survey data collecting demographic information (age, gender, country of residence, experience level with horses). Participants listened to 32 audio clips of horse whinnies and categorized each as positive or negative valence, and ranked the arousal level on a scale from 1-10 with 1=calm and 10=excited.
DOI: 10.17632/zggnjpnmwp.2
title: Bangla Bengali sentiment lexicon dictionary with positive and negative words

description: This dataset contains around 1300 positive and negative Bengal ( Bangla ) sentiment words. This lexicon was created from a Bengali review corpus. If you use this lexicon please cite following paper- @inproceedings{sazzed2020development, title={Development of Sentiment Lexicon in Bengali utilizing Corpus and Cross-lingual Resources}, author={Sazzed, Salim}, booktitle={2020 IEEE 21st International Conference on Information Reuse and Integration for Data Science (IRI)}, pages={237--244}, year={2020}, organization={IEEE Computer Society} } https://www.cs.odu.edu/~ssazzed/IEEE_IRI_2020.pdf
DOI: 10.17632/j23sx7t5rh.2
title: Figure 1

description: Figure 1. Distinct anatomical feature of dermal white adipose tissue (dWAT) in mice and human skin. (a) In mice, the dWAT underneath the reticular dermis is separated from the sWAT by the panniculus carnosus. (b) The panniculus carnosus was absent in human skin, however, there are many morphological and biological distinctions between dWAT and sWAT.
DOI: 10.17632/gn6626fw53.2
title: LINF_090020100

description: mitochondrial carrier protein | MCP21; Leishmania infantum
DOI: 10.17632/zxxh8xn3nj.2
title: supplementary material 2

description: Morphometric data of the three studied species
DOI: 10.17632/zmvgzy2h3f.2
title: LINF_090020700

description: paraflagellar rod component | PAR1; Leishmania infantum
DOI: 10.17632/7pnjpc4b36.2
title: Surface energy in impact testing of unnotched specimens - Charpy and bending tests RAW data

description: Raw data from three point bending and Charpy impact testing of nanoreinforced epoxi. The analyisis and results obtained from this data are writen on the manuscript: "Surface energy in impact testing of unnotched specimens: influence of carbon nano-fillers in epoxy matrix". M.C Serna Moreno, S. Horta Muñoz. The nomenclature applied is detailed on the manuscript.
DOI: 10.17632/6tx2dybmjg.2
title: supplementary material 3

description: results of Canonical Variance Analyses
DOI: 10.17632/7psyyvctb6.2
title: JAAD Mendeley Supplemental: Female sex is associated with higher rates of dermatologic adverse events among patients with melanoma receiving immune checkpoint inhibitor therapy: a retrospective cohort study

description: JAAD Research Letter Supplemental Figure: Female sex is associated with higher rates of dermatologic adverse events among patients with melanoma receiving immune checkpoint inhibitor therapy: a retrospective cohort study
DOI: 10.17632/s6thnbmkjz.2
title: Stock market indices

description: Shanghai Stock Exchange Composite Index (SSE Composite Index) and Shenzhen Stock Exchange Component Index (SZSE Component Index) are used to verify the validity of this proposed model.The time range for both SSE Composite Index and SZSE Component Index is from January 4, 2010 to December 31, 2020, with a total of 2674 samples over 11 years. During these years, the economic level of China has steadily improved, and the financial system has been constantly perfected.
DOI: 10.17632/cvgdz93p5z.3
title: Effectiveness of Hot Pack on Labor Pain, Duration of Labor, and Satisfaction of Primigravida: A Randomized Controlled Trial

description: Abstract Background: Labor pain is an intense pain experienced by women. One of the nonpharmacologic measures used for managing labor pain is heat therapy. However, there is a lack of evidence on the effectiveness of single-use hot packs for labor pain and duration. Objectives: To determine the effect of single-use instant hot pack applied on the lower back in the active phase of labor on pain intensity and labor duration and to determine the satisfaction of primigravid women. Design: Randomized controlled trial. Setting: A labor unit of an Armed Forces Hospital in Saudi Arabia. Participants: Primigravida in the active phase of the first stage of labor, with a normal onset of labor. Methods: This randomized controlled trial was conducted between August 2018 and July 2019. Participants were randomly selected and assigned to either the intervention group (n = 45) or the control group (n = 46). The intervention group received an application of a single-use instant hot pack (Dynarex) on the lower back for 30 min and rest for 10 min. The intervention was continued until delivery of the fetus. The control group received routine care, including intermittent Entonox inhalation. The outcome variable, labor pain intensity was assessed every 30 min using a visual analog scale, at 30, 60, 90,120,150 and 210 min, and the duration of labor was assessed using the WHO Modified partograph. The participant’s satisfaction with the labor experience was assessed 2 h after delivery using the Labor and Delivery Satisfaction Scale, which was developed by the authors. Results: The intervention and control group did not differ significantly in characteristics at baseline. In the intervention group, the use of hot packs significantly lowered the intensity of labor pain at all assessment points (30, 60, 90, 120, 150, and 210 min) as compared with the control group (p≤0.05). The duration of labor did not differ significantly between the two groups (p≥0.05). Furthermore, the intervention group expressed significantly higher satisfaction with the labor and delivery experience as compared with the control group (p≤0.05). Conclusions: The single-use instant hot pack is an effective, convenient, and easy nonpharmacologic approach to pain reduction during labor and provides women an overall satisfactory labor and delivery experience. However, it is not effective in shortening the duration of labor. It can be recommended for managing the pain of women in labor.
DOI: 10.17632/jvz3z2zhnv.2
title: Data for 'Analysing the perceived role of blockchain technology in SCM context for the manufacturing industry'

description: The data is associated with the study published in IJPR on the following link https://www.tandfonline.com/eprint/8IZBCSBGISBRDPT4EHNW/full?target=10.1080/00207543.2021.1883761 https://doi.org/10.1080/00207543.2021.1883761
DOI: 10.17632/2vcvjycf63.2
title: Data for the synthesis and characterization of fluorene-containing β-diketonato ligands and their Rhodium(I) complexes

description: Three novel β-diketonato ligands were synthesized containing the fluorene-group as substituent. Rhodium(I) complexes thereof were synthesized as reported in Fluorene-containing β-diketonato ligands and their Rhodium(I) complexes. The 1H and 13C NMR’s of all 6 compounds are reported. Spectroscopic data of concentration variations vs absorbance intensities are given for ligands and rhodium(I) complexes showing that they follow the Beer-Lambert law and extinction coefficients (ԑ) are determined. Fluorescence quantum yields are determined and graphs showing the integrated fluorescent intensities vs absorbance are shown. The electrochemistry data of compounds 1 – 6 are reported for scan at 100 - 500 mV/s scan speeds.
DOI: 10.17632/2grm3z7cb6.3
title: Datasets for the data collection method and examples of the material flows at city level

description: Two excel files serve as the datasets for the publication “H. Gao et al., 2021. Datasets for the data collection method and examples of the material flows at city level, Data in Brief.” It provided the detailed instructions of how to use the standardized method to obtain the material flow data with the general data sources at city level. For the application of this method in case of 16 cities in Shandong Province, China, as well as more illustrations of the results based on these datasets of the material flows, they can be found in the publication “H. Gao, X. Tian, Y. Zhang, L. Shi, F. Shi, 2021. Evaluating circular economy performance based on ecological network analysis: A framework and application at city level. 105257. Resources, Conservation & Recycling,https://doi.org/10.1016/j.resconrec.2020.105257.”
DOI: 10.17632/wzrr3t6nnz.4
title: In silico ultrasound phantoms for mimicking the proper volar forefinger artery

description: These ultrasound numerical phantoms mimic the systolic-diastolic cycle of i) an ideal cylindrical artery, ii) a true proper forefinger artery. The phantoms are used for validating and comparing a method for assessing the vibration-altered wall shear stress in the digital arteries. These in silico B-mode cineloops are intended to define a reference case for testing our method. In both cases, we presented also the geometry and scatters used to perform the ultrasound simulation.
DOI: 10.17632/44k7pff4mr.2
title: Breast Cancer RNA-seq Dataset for Survival Analysis

description: The Breast Cancer microarray dataset is organized as just an array. The functions (genes) are expressed by array rows whereas the columns are used to represent the instances. There are two classes: Death or Alive. Dataset name Death Alive Total BC RNA-seq-Dataset 1867 1539 3406 BC RNA-seq Dataset are collected from three resources
DOI: 10.17632/h74fx6996c.2
title: Supplemental table 1

description: Supplemental table for jds.2020-19569
DOI: 10.17632/jg7d5bwk54.2
title: LINF_360016800

description: ribosomal protein L24; Leishmania infantum