cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.10441456
title: Catalog of relocated seismic sequences in Irpinia

description: This catalog contains the hypocenter coordinates and the source parameters estimations for the enhanced catalogs of seismic sequences in Southern Apennines obtained in Scotto di Uccio et al. (2023)
DOI: 10.5281/zenodo.11501346
title: Data for "Chiral topological light for detection of robust enantiosensitive observables"

description: Data for "Chiral topological light for detection of robust enantiosensitive observables"

This repository contains the data files and Jupyter notebook to reproduce the numerical results from the paper

"Chiral topological light for detection of enantiosensitive observables", N. Mayer, D. Ayuso, P. Decleva, M. Khokhlova, E. Pisanty, M. Ivanov and O. Smirnova, Nature Photonics (2024), doi:10.1038/s41566-024-01499-8, arXiv:2303.10932

as well as the results contained in its Supplementary Files. 

The Python code used to calculate the data files is available from the authors upon reasonable request. Please refer to the Methods section of the paper for a detailed description of the numerical approach behind the numerical simulations.

Note that the figures in the paper are assembled in a separate software from the plots reproduced here, and that we include here only the results for the theoretical simulations of the molecular response.

The repository contains the following files:



atomic_units.py: Python file containing useful definitions of quantities in atomic units.

readme.txt: file containing a detailed description of the files contained in files.zip

Figures_CTL.ipynb: Jupyter notebook to load the files in files.zip and plot the images of the paper.

files.zip: zip file containing the data files.


The copyright of this collection rests with the authors (2024). It is made available under the Creative Commons Attribution-ShareAlike 4.0 (CC BY-SA 4.0) license. For any academic use that results in a publication, please cite the main paper in addition to this deposit.
DOI: 10.5281/zenodo.3819912
title: Dielectric spectra of thawed and frozen wet organic Arctic soils

description: The submitted files contain laboratory data dielectric spectra measurements for six Arctic organic soils. The data are presented in the frequency dependences form of the refractive index and normalized attenuation coefficient obtained at various moistures and temperatures of soil samples.
DOI: 10.5281/zenodo.8417762
title: The data of scintillation

description: The data includes the 2020-2022 scintillation data of Zhongshan Station in Antarctica. The data includes time, phase scintillation, amplitude scintillation, elevation Angle, satellite number, and geomagnetic latitude and longitude.
DOI: 10.5285/5c380c93-986e-499c-b09f-25939daf4766
title: Microclimate data from Jane Col, 2007-2016

description: Microclimate data collected hourly at Jane Col, for 12 climatic variables via automatic data loggers, 2007-2016. Data is not available across the entire temporal range for all variables. NERC funded under the British Antarctic Survey National Capability programme, Polar Science for Planet Earth.
description: Microclimate data was recorded at Jane Col. Data was automatically collected and recorded on an hourly basis. 12 climatic variables were recorded: wind speed, wind direction, air pressure, air temperature, relative humidity, photosynthetically active radiation (PAR), UVA, UVB, temperature at four different depths.
description: Logger make: Campbell CR1000, serial no. 3940. Variables: wind speed, wind direction. Sensor: Young 05103. Sensor serial no.:72128. Variable: air pressure. Sensor: Vaisala. Variables: temperature (all depths). Sensor: Campbell 107 x 4. Sensor serial no.: 13125/5,6,7 & 10. Variable: relative humidity. Sensor: Campbell CS215. Sensor serial no.: E1611. Variable: photosynthetically active radiation. Sensor: Skye SKP215. Sensor serial no.: 0892 5756. Variable: UVA. Sensor: Delta-T UV-3pA. Sensor serial no.: 124. Variable: UVB. Sensor: Skye SKU430. Sensor serial no.: 0702 24526.
description: Missing values are included where data was not recorded, or where values indicating malfunctioning equipment have been removed. No extensive quality control or verification has been undertaken. Due to the harsh conditions in Jane Col, data has not been recorded continually across the period. The exact locations of sensors within the soil does change over time due to environmental conditions, so depths recorded are a guide.
DOI: 10.60520/ieda/113147
title: P–T evolution of the Cyclades Blueschist Unit: Constraints on the evolution of a nascent subduction system from Zr-in-rutile (ZiR) and quartz-in-garnet (QuiG) thermobarometry

description: This dataset contains the results of Zr-in-rutile thermometry (ZiR) and quartz-inclusion-in-garnet barometry (QuiG) on a suite of blueschist and eclogite samples from the Cyclades Blueschist Unit (CBU) on the island of Syros, Greece. Crystals of rutile and quartz located as inclusions within garnet were analyzed with the goal of constraining the minimum pressure and temperature conditions of garnet formation. The pressure and temperature constraints on garnet formation were then used to infer the pressure and temperature trajectory of the subduction geotherm during metamorphism of the Cyclades Blueschist Unit.
DOI: 10.6073/pasta/0066d6b04e736af5f234d95d97ee84f3
title: Stream discharge in gaged watersheds at the HJ Andrews Experimental Forest, 1949 to present

description: Streamflow from selected small watersheds has been continuously monitored at the Andrews Forest beginning in November 1952 and the Lookout Creek Gauging Station has been maintained by the USGS since October, 1949. The objectives of this study include: (1) to evaluate long-term changes in hydrology associated with various management treatments, notably clearcut logging, selective logging, and burning; (2) to provide baseline data for affiliated precipitation and stream water chemistry and sediment transport studies; and (3) to characterize the hydrologic regime of old-growth forests at different elevations. 
 Streamflow records from small watersheds began in November 1952 at WS 1,2, and 3 (60 to 100 ha), 1963 at WS 6, 7, and 8 (15 to 22 ha) 1968 at WS 9 and 10 (9 and 10 ha), 1980 at Mack Creek (580 ha), and 1949 at Lookout Creek (6242 ha). Data have been collected continuously since the start of data collection for all watersheds, with the exception of WS7, which was shut down as a cost-saving maneuver from WY1988 through WY1994. See https://andrewsforest.oregonstate.edu/research/infrastructure/watersheds for other information.
 Raw instantaneous streamflow data in cubic feet per second (cfs) and mean flow at fine temporal intervals are available. Rating curves for fixed trapezoidal flumes are maintained for all small watersheds except Lookout Creek and allow calculation of mean and total flow. The USGS-maintained Lookout Creek relies on annual rating table development to reflect changes in the open channel for instantaneous flow calculation. Entity 1 includes a reconstructed history of USGS Lookout Creek hourly data beginning in 1950 and more recently 30 and 15 minute interval data. Calculated mean cfs and total flow for each watershed are available at daily (Entity 2), monthly (Entity 3), annual (Entity 4), and stream sampling (Entity 6) time intervals. An interactive program, FLOW (Entity 5), allows the user to download instantaneous, mean and total flow at requested time periods (e.g., 5 minute, 15 minute, hourly) for all watersheds except for Lookout Creek.
DOI: 10.6084/m9.figshare.21629903
title: all-silicon.txt

description: Refractive index simulation of ASM.
DOI: 10.6084/m9.figshare.21629921
title: QSM.txt

description: Refractive index simulation of QSM.
DOI: 10.6084/m9.figshare.25687185
title: Millimeter-deep micron-resolution vibrational imaging by shortwave infrared photothermal microscopy

description: Raw data and code for paper "Millimeter-deep micron-resolution vibrational imaging by shortwave infrared photothermal microscopy"
DOI: 10.6084/m9.figshare.26395027
title: Supplementary Material for: Fast itch relief during dupilumab predicts clinical efficacy in bullous pemphigoid, a retrospective cohort study

description: Introduction: Dupilumab has emerged as a promising treatment option for bullous pemphigoid (BP). Rapid identification of responders could avoid the need of additional immunosuppressive treatments that are associated with increased morbidity and mortality. 
Methods: To investigate the course of itch as an early indicator of treatment response, data of 12 BP patients treated with dupilumab at the University Hospital of Zurich were retrospectively evaluated. Disease severity was assessed by bullous pemphigoid disease area index (BPDAI) and pruritus by a numeric rating scale (NRS, 0-10) at baseline, day 1, 3, 14, month 1, 2 and last follow-up.
Results: 8/12 patients (67%) had complete, and 4/12 patients (33%) had partial response during dupilumab treatment. Notably, a highly significant reduction of pruritus (p &lt; 0.0001) was observed already on day 1 with further improvement at later time points. Moreover, fast relief of itch could predict treatment response with a significant correlation to clinical response on day 14 (Spearman correlation R 0.70, p-value 0.025), with a positive but non-significant trend on day 3 (R 0.63, p-value 0.091). Additionally, 92% (11/12 patients) were on dupilumab monotherapy at last follow-up without any concomitant systemic or topical treatment for BP. 
Conclusions: The rapid and significant decline in BP-associated pruritus observed with dupilumab correlated significantly with disease remission. Early evaluation of pruritus response could change how bullous pemphigoid is treated in the future and avoid additional immunosuppressive treatment in BP.
DOI: 10.6084/m9.figshare.26780011
title: Supplementary Material for: Patient and caregiver perspectives on gender disparity in chronic kidney disease: Questionnaire survey, based on an interview study

description: Background: Chronic kidney disease (CKD) in stages 3-5 without albuminuria occurs more often in women than in men; however, most patients initiating and receiving kidney replacement therapy (KRT) are men. Sex-determined biological factors and gender-related aspects likely both account for this discrepancy. Patient opinions on gender-related discrepancies in kidney care have not been investigated. 
Methods: Building upon the findings of semi-structured interviews previously conducted with CKD patients and their caregivers, two questionnaires were developed to investigate patient behavior and opinions relating to gender and CKD. These questionnaires containing 39 items were distributed to eight outpatient clinics in Austria. Responses were descriptively analyzed and compared between genders, as well as between age groups and CKD stages. 
Results: Questionnaires from 783 patients and 98 caregivers were included in the analysis and covered health awareness and self-management of disease, the impact of gender roles and gender equality, and patient autonomy and trust in the health-care system. 56.1% of men patients and 63.1% of women patients found that women were better at looking after their health compared to men (41.1%/34.3% no difference, 2.8%/2.6% men better). 95.4% of men patients, 95.0% of women patients, 100% of men caregivers and 95.5% of women caregivers stated that all patients with kidney disease were treated completely equally, irrespective of gender.
Conclusion: Neither the patients nor the caregivers stated gender-determined treatment decisions in CKD care. Both men and women however agreed that women are better at maintaining their own health and excel in disease self-management.
DOI: 10.1285/i15910725v36p53
title: Erbe spontanee salentine. Guida al riconoscimento e all'uso delle piante alimentari tradizionali

description: This paper describes an investigation into the Salento aimed at deepening the knowledge on food uses of wild herbs. This study was carried out due the high interest that arouses in the ethnobotany enthusiasts and in the experts and concerned the species used in the past as part of the local tradition, transcribed through interviews with elders and experts. The main difficulty has been to combine the dialect names used by collectors with the binomial scientific after you have correctly determined the species; in fact, for human consumption, you collect the basal rosettes from tender leaves, while the determination can be made only when the plant is in bloom. A photographic guide easy to use was made for determining in the field of edible plants, bringing the photographic comparison of the rosette of leaves to gather for consumption and the plant in the flowering period. After the botanical description are reported the information on the uses for each species, proverbs, idioms and some traditional recipes, proposed with modern taste. The main purpose of the book, published by Grifo publisher, is to contribute to the protection of biodiversity through an rapprochement to local environmental issues. The collection of wild herbs can be a healthy outdoor activities and an important tool of socialization, and a useful message to understand the value of wild vegetables that are an important resource to be preserved.
DOI: 10.1285/i20380313v20p213
title: La cucina salentina: fra i piatti della tradizione

description: Food  may  be  considered  a  cultural  identity  vehicle,  this  because  in  the  course   of   time   several   symbols,   messages   and   significances   concerning   nutrition models went beyond its mere nutritive sense. This  research  aspires  to  catch  Salento's  culinary  identity,  enhancing    its  typicalness and higlighting its mediterranean features. It   starts   with   an   overview   on   the   typical   Salento's   recipes,   reviews   traditional  products  (bread,    typical  “Friselle”,  dried  figs)  and  local  family  cooking uses, until focusing the definition of Mediterranean Diet as a nutritive model strongly based on bread, olive oil and wine. Therefore  culinary  identity  should  be  minded  as  a  dynamic  entity    since  it  was shaped several times by the different mixed cultures in past. Food  is  the  a  condensation  of  several  knowledges,  traditions,  methods;  Places,  climate,  social  and  economic  conditions,  religious  rules  have  ,  in  the  course of time influenced types, quantities and tastes of food. Last but not least must be considered the relevant convivial aspect of eating. UNESCO in 2010 stated Mediterranean Diet as immaterial World Heritage , describing it as “permanent in time and space”. This research analyzes its continue contaminations by different civilizations, each with their own typical food from all over the world.
DOI: 10.1285/i20380313v20p99
title: Modelli alimentari del Mediterraneo: le diete monastiche nell’Italia peninsulare moderna tra regole e cucine di genere

description: Acquired  the  theme  of  food  monastic  and  convent  in  recent  years  has  increased  gastronomic  interest  and  visibility  historiographical  thanks  both  to  the relevant specific documentary that perspectives  of  investigation  even  in  terms  of  diet,  this  contribution  -  using  mostly of original archival sources - focuses on the analysis of example of some cases  linked  to  food  regimes  observed  by  male  and  female  community  in  the  modern  age,  identified  for  diversity  of  religious  charism  and  geographical  location, moving from Terra d'Otranto, crossing street via the captains, Molise, the city of Rome to arrive, finally, in the Samnite Campan.
DOI: 10.1594/pangaea.934387
title: Airborne Laser Scanning (ALS) Point Clouds of Trail Valley Creek, NWT, Canada (2018)

description: The airborne laser scanning (ALS) datasets were acquired at the Arctic tundra site of Trail Valley Creek (TVC), Northwest Territories, Canada (68°44'25'' N 133°29'36'' W, Marsh et al. 2008), which is underlain by continuous permafrost. The point cloud data were acquired with a Riegl LMS-Q680i airborne laser scanner on board the Alfred Wegener Institute's POLAR-5 science aircraft. Basic processing and filtering steps were applied to the ALS point cloud. Based on a classification into ground and vegetation points, a Digital Terrain Model (DTM) and rasters of mean and maximum vegetation heights are derived. OPALS software was used to process the raster (tif). Detailed metadata are included.
DOI: 10.5281/zenodo.10651762
title: Data for "Triplet-Singlet Emission of d-Block Metal Complexes   Characterized by Spin-Orbit Natural Transition Orbitals"

description: Authors: Aleksandr Zaichenko and Jochen Autschbach

Title: Triplet-Singlet Emission of d-Block Metal Complexes   Characterized by Spin-Orbit Natural Transition Orbitals

Publishing data: Soon

Archives contain orbital data in cube format and MOLCAS input/output basic information.

Files and folders have been titled complementary with information given in paper.
DOI: 10.5281/zenodo.10877603
title: The calculation of the efficiency of the alcohol distillery stillage filtration drying
DOI: 10.5281/zenodo.13341896
title: SDUST2023BCO: a global seafloor model determined from multi-layer perceptron neural network using multi-source differential marine geodetic data

description: SDUST2023BCO.nc is the global marine bathymetric model covering 80°S~80°N and 0°~360°E on 1′×1′ grids. The dataset contains geospatial information (latitude, longitude), SDUST2023BCO bathymetric model and an attachment data.
DOI: 10.5281/zenodo.4454489
title: Data for "Microbiome meta-analysis and cross-disease comparison enabled by the SIAMCAT machine learning toolbox"

description: Data for the SIAMCAT manuscript
DOI: 10.6084/m9.figshare.24162549
title: Palaeomagnetic Dataset for Trowbarrow Quarry section, and additional sites in South Cumbria and north Lancashire

description: The excel file contains the followingPage 1: Interpretation matrix for the palaeomagnetic directions from TrowbarrowPage 2: Interpretation matrix for the palaeomagnetic directions from other south Cumbrian sectionsPage 3: raw measurement data for all the Trowbarrow samplesPage 4: raw measurement data for all the additional samplesPage 5: The data used in the fold tests
DOI: 10.6084/m9.figshare.25982683
title: Supplementary Material for: Reference equations for within-breath respiratory oscillometry in White adults

description: Background: within-breath analysis of oscillometry parameters is a growing research area since it increases sensitivity and specificity to respiratory pathologies and conditions. However, reference equations for these parameters in White adults are lacking and devices using multiple sinusoids or pseudorandom forcing stimuli have been underrepresented in previous studies deriving reference equations. The current study aims to establish reference ranges for oscillometry parameters, including also the within-breath ones in White adults using multi-sinusoidal oscillations.
Methods: White adults with normal spirometry, BMI≤30kg/m2, without a smoking history, respiratory symptoms, pulmonary or cardiac disease, neurological or neuromuscular disorders, and respiratory tract infections in the previous 4 weeks were eligible for the study. Study subjects underwent oscillometry (multifrequency waveform at 5-11-19Hz, Resmon PRO FULL, Restech Srl, Italy) in 5 centers in Europe and the USA according to international standards. The within-breath and total resistance (R) and reactance (X), the resonance frequency, the area under the X curve, the frequency dependence of R (R5-19), and within-breath changes of X (ΔX) were submitted to Lambda-Mu-Sigma models for deriving reference equations. For each output parameter, an AIC-based stepwise input variable selection procedure was applied. 
Results: 144 subjects (age 20.8 – 86.3 years; height 146 – 193 cm; BMI 17.42 – 29.98 kg/m2; 56% females) were included. We derived reference equations for 29 oscillatory parameters. Predicted values for inspiratory and expiratory parameters were similar, while differences were observed for their limits of normality.
Conclusions: We derived reference equations with narrow confidence intervals for within‐breath and whole‐breath oscillatory parameters for White adults.
DOI: 10.6084/m9.figshare.26085265
title: A Dataset of Distribution and Characterization of Underground Wastewater Treatment Plants in China

description: Underground wastewater treatment plants (U-WWTPs) have emerged as a novel paradigm for urban wastewater pollutants management, offering benefits such as alleviating the Not-in-my-backyard (NIMBY) effect and utilizing land resources efficiently. China stands at the forefront, witnessing swift advancements in U-WWTP technology and deployment. However, the absence of a thorough understanding of their geographical distribution and operational characteristics could lead to misaligned planning and construction, resulting in inefficient resource allocation and treatment capacities for urban wastewater treatment. This dataset provides an up-to-date overview of the spatial distribution, processes selection, and discharge standards for all U-WWTPs in China (with total number of 201) constructed since 1995. To enhance comparative analysis, the dataset has been supplemented with information on conventional aboveground wastewater treatment plants (A-WWTPs), comprising a total of 2464 records, which enriching a more comprehensive evaluation of different wastewater treatment approaches. Utilizing this dataset can provide essential data supports for the strategic management of urban wastewater systems and serve as a valuable reference for the paradigmatic renovation of existing wastewater treatment plants (WWTPs).
DOI: 10.6084/m9.figshare.26526019
title: Supplementary Material for: Claudin-1 in head and neck squamous cell carcinoma

description: Introduction. The objective response rate to immunotherapy is limited in recurrent/metastatic head and neck squamous cell carcinoma (HNSCC) patients, whose prognosis is still dismal. Few prognostic factors are clinically available, mostly related to patient or disease characteristics. Gene expression signatures offer better prognostic abilities but are mainly used in research. One such GE model classifies HNSCC into 6 clusters with different prognoses. Claudin-1 (CLDN1), which influences tumor microenvironment and immune cell infiltration, has emerged as a potential target, especially in cancers like HNSCC with high CLDN1 expression.
Methods. A single-center cohort of 100 loco-regionally advanced HNSCC patients from the BD2Decide observational study was analyzed. Patients were selected to balance long-term survivors and deceased patients, including HPV-negative and HPV-positive cases. Primary tumor specimens underwent GE analysis using Affymetrix ClariomD chips. Primary endpoint was overall survival (OS).
Results. The cohort comprised 100 HNSCC patients with a median age of 60 years, predominantly men (76%). Median OS and DFS were 94.24 and 42.79 months, respectively. CLDN1 expression varied significantly among primary sites, being highest in hypopharynx cancers. Differences in expression were not significant when stratified by HPV status or clinical stage. CLDN1 expression differed across the 6 transcriptomic clusters, with the highest levels in clusters associated with mesenchymal and hypoxic features. Higher CLDN1 expression correlated with shorter OS (HR 3, p=0.0023) and DFS (HR 2.14, p=0.02).
Conclusion. CLDN1 expression is heterogeneous in HNSCC and carries prognostic significance. It is highest in tumors with HPV-like biology and hypoxic environments, and lowest in immune-sensitive clusters. High CLDN1 is a negative prognostic factor and a promising therapeutic target. Anti-CLDN1 treatments could improve outcomes of CLDN1+ HNSCC patients, and combination therapies with ICIs might overcome resistance in CLDN1- cases. These findings support the need for clinical studies on anti-CLDN1 therapies.