cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.15237564
title: Social Context Restructures Behavioral Syntax in Mice

description: Abstract

The study of social behavior in mice has grown increasingly relevant for unraveling associated brain circuits and advancing the development of treatments for psychiatric symptoms involving social withdrawal or social anxiety. However, a data-driven understanding  of behavior and its modulation in solitary and social contexts is lacking. In this study, we employed motion sequencing (“MoSeq”) to decompose mouse behaviors into discrete units (“Syllables”) and investigate whether—and how—the behavioral repertoire differs between solitary and dyadic (social) settings. 

Our results reveal that social context significantly modulates a minority (25%) of syllables, containing predominantly stationary and undirected behaviors. Notably, these changes are associated with spatial proximity to another mouse rather than active social contact. Interestingly, a network analysis of syllable transitions shows that context-sensitive syllables exhibit altered network influence, independent of the number of connected syllables, suggesting a regulatory role. Furthermore, syllable composition changes significantly during social contact events with two distinct sequence families governing approach and withdrawal behaviors. However, no unique syllable sequences mapped to specific social interactions. 

Overall, our findings suggest that a subset of syllables drives contextual behavioral adaptation in mice, potentially fascilitating transitions within the broader behavioral repertoire. This highlights the utility of MoSeq in dissecting nuanced, context-dependent behavioral dynamics.



Related files

The preprint can be found at https://www.biorxiv.org/content/10.1101/2025.04.17.648924.


The code used to generate the figures shown in the preprint based on this data can be found at Marti-Ritter/social-context-restructures-behavioral-syntax-in-mice.

This data needs to be downloaded and all subdirectories unpacked, then the root_dir variable at the top of each notebook needs to be set to the path of the data directory.
DOI: 10.25346/s6/0z0bve/zodnh3
title: NHFR_31330-31490.pdf
DOI: 10.25346/s6/0z0bve/ezfe0r
title: NHFR_34010-34190 BACKUP - corrctions at the end of the file.pdf
DOI: 10.5281/zenodo.18217125
title: CEF_Bundle3_EL1_Lexicon

description: The EL-1 Lexicon is the primary semantic layer of theCore Emotion Framework (CEF). It contains 500 Englishemotional terms, each mapped to a single CEF facetthrough a deterministic, drift-free procedure groundedin TS-6 and validated through the Phase-4computational architecture. Each entry includes asymbolicRepresentation (ordered functional powers), avectorRepresentation (10-dimensional normalizedemotional vector), facet mapping, and optionalvalence/arousal metadata. This bundle also includeshistorical versions (v0.1–v0.4), documenting thelexicon’s evolution from a 10-term seed set to the full500-term canonical edition. EL-1 serves as the bridgebetween natural language and the CEF’s conceptualand computational layers, enabling linguistic analysis,affective computing, knowledge-graph integration, andcross-disciplinary research. This bundle is theauthoritative publication of EL-1 v1.0.
DOI: 10.5281/zenodo.18237506
title: CEF_Bundle3_EL1_Lexicon

description: The EL-1 Lexicon is the primary semantic layer of theCore Emotion Framework (CEF). It contains 500 Englishemotional terms, each mapped to a single CEF facetthrough a deterministic, drift-free procedure groundedin TS-6 and validated through the Phase-4computational architecture. Each entry includes asymbolicRepresentation (ordered functional powers), avectorRepresentation (10-dimensional normalizedemotional vector), facet mapping, and optionalvalence/arousal metadata. This bundle also includeshistorical versions (v0.1–v0.4), documenting thelexicon’s evolution from a 10-term seed set to the full500-term canonical edition. EL-1 serves as the bridgebetween natural language and the CEF’s conceptualand computational layers, enabling linguistic analysis,affective computing, knowledge-graph integration, andcross-disciplinary research. This bundle is theauthoritative publication of EL-1 v1.0.
DOI: 10.15468/dl.t89eyw
title: Occurrence Download

description: A dataset containing 6114 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is GYPSUM LICHENS: a global data set of lichen species from gypsum ecosystems"
 ]
}

 The dataset includes 6114 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028211-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25810/fj1y-8c74.77
title: International Wire Services Coverage of Climate Change or Global Warming, 2004-2025 - April 2025

description: The Media and Climate Change Observatory Data monitors 126 sources (across newspapers, radio and TV) in 58 countries in seven different regions around the world. Data is assembled by accessing archives through the Lexis Nexis, Proquest and Factiva databases via the University of Colorado libraries. More information may be found at: http://mecco.colorado.edu.
DOI: 10.6084/m9.figshare.29046476
title: supplementary materials

description: This dataset contains supplementary materials for the manuscript <i>'Ensemble-learning landslide susceptibility mapping considering climate and seismic factors along the China-Pakistan Economic Corridor.'</i> Includes: (1) multicollinearity analysis (VIF scores) of rainfall indices, (2) variable importance rankings for machine learning models, (3) landslide susceptibility percentages, and (4) landslide density calculations. Data derived from climate and seismic datasets along the CPEC (1970–2020).<br>
DOI: 10.48580/dgmv5-3dx
title: World Foraminifera Database
DOI: 10.48580/dgmv5-3dy
title: Dermaptera Species File
DOI: 10.48580/dgmv5-3f8
title: World Entiminae Database
DOI: 10.48580/dgmv5-3f9
title: Zoraptera Species File
DOI: 10.48580/dgmv5-3fb
title: Mantophasmatodea Species File
DOI: 10.15468/dl.pb6bqr
title: Occurrence Download

description: A dataset containing 43467707 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is South Africa",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 43467707 records from 2162 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0027815-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dz54mq
title: Occurrence Download

description: A dataset containing 19458 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "TaxonKey is Hedyosmum Sw."
 ]
}

 The dataset includes 19458 records from 387 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002129-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5067/met11/ceres/geo_ed4_nh_v01.4
title: SatCORPS CERES GEO Edition 4 Meteosat-11 Northern Hemisphere Version 1.4
DOI: 10.15468/dl.b6hy8g
title: Occurrence Download

description: A dataset containing 5982 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Caracterización de flora para la formulación y actualización de Planes de Manejo Ambiental en la jurisdicción de Corpoguavio"
 ]
}

 The dataset includes 5982 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000260-250424135625364/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fevqmg
title: Occurrence Download

description: A dataset containing 3816632 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pinopsida"
 ]
}

 The dataset includes 3816632 records from 2053 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005857-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/vx7wb3vg22.1
title: FHM factor Copula

description: To capture non-smooth changes in dynamic dependence, we incorporate a factorial hidden Markov regime-switching model within the factor Copula framework. This approach allows us to construct a factorial hidden Markov (FHM) factor Copula model that captures external shocks of varying magnitude, direction and short or long-term effect from significant events to multi-dimensional dependence.
DOI: 10.15468/dl.6jrh3s
title: Occurrence Download

description: A dataset containing 109 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "TaxonKey is Humulus japonicus Siebold & Zucc."
 ]
}

 The dataset includes 109 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002306-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28656086
title: MPCID: A new high-resolution multi-precipitation concentration indicators dataset for mainland China

description: High - resolution Multi - precipitation Concentration Indicators Dataset for Mainland ChinaDataset Overview<br>This dataset provides high - resolution multi - precipitation concentration indicators for mainland China, covering both historical data from 1961 - 2022 and future projections from 2015 - 2100. The precipitation concentration indicators include Precipitation Concentration Degree (PCD), Precipitation Concentration Period (PCP), Daily Precipitation Concentration Index (DPCI), and Monthly Precipitation Concentration Index (MPCI).Historical Data<br>The historical data is sourced from two main components:<br>Station Observations: Annual data for each of the four indicators from 1961-2020 at various stations across mainland China, stored in CSV format.<br>Grid Observations: Gridded data with a resolution of 0.25° based on the CN05.1 dataset from 1961-2022, stored in NetCDF format.Future Projections<br>The future projections are based on four Shared Socioeconomic Pathways (SSPs): SSP1-2.6, SSP2-4.5, SSP3-7.0, and SSP5-8.5.Data Format<br>CSV files: The station - based annual data in CSV format can be easily opened and analyzed using spreadsheet software like Microsoft Excel or programming languages such as Python with libraries like Pandas.<br>NetCDF files: The gridded data in NetCDF format can be processed using libraries like netCDF4 in Python or nco (NetCDF Operators) in the command - line environment.
DOI: 10.6084/m9.figshare.28656086.v3
title: MPCID: A new high-resolution multi-precipitation concentration indicators dataset for mainland China

description: High - resolution Multi - precipitation Concentration Indicators Dataset for Mainland ChinaDataset Overview<br>This dataset provides high - resolution multi - precipitation concentration indicators for mainland China, covering both historical data from 1961 - 2022 and future projections from 2015 - 2100. The precipitation concentration indicators include Precipitation Concentration Degree (PCD), Precipitation Concentration Period (PCP), Daily Precipitation Concentration Index (DPCI), and Monthly Precipitation Concentration Index (MPCI).Historical Data<br>The historical data is sourced from two main components:<br>Station Observations: Annual data for each of the four indicators from 1961-2020 at various stations across mainland China, stored in CSV format.<br>Grid Observations: Gridded data with a resolution of 0.25° based on the CN05.1 dataset from 1961-2022, stored in NetCDF format.Future Projections<br>The future projections are based on four Shared Socioeconomic Pathways (SSPs): SSP1-2.6, SSP2-4.5, SSP3-7.0, and SSP5-8.5.Data Format<br>CSV files: The station - based annual data in CSV format can be easily opened and analyzed using spreadsheet software like Microsoft Excel or programming languages such as Python with libraries like Pandas.<br>NetCDF files: The gridded data in NetCDF format can be processed using libraries like netCDF4 in Python or nco (NetCDF Operators) in the command - line environment.
DOI: 10.17632/pb7dxpf29s.1
title: paper original data

description: Shanghai Taopu building power consumption data.
DOI: 10.17632/pb7dxpf29s.2
title: paper original data

description: Shanghai Taopu building power consumption data.
DOI: 10.15468/dl.wf4fky
title: Occurrence Download

description: A dataset containing 174 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Caprimulgus eximius)",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "License is one of (CC-BY 4.0, CC0 1.0)"
 ]
}

 The dataset includes 174 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085450-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jbph3e
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cyanthillium cinereum",
 "Country is Tonga",
 "HasCoordinate is true"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085449-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nhewxs
title: Occurrence Download

description: A dataset containing 15 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cyanthillium cinereum",
 "Country is Timor-Leste",
 "HasCoordinate is true"
 ]
}

 The dataset includes 15 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0085448-250717081556266/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.16652193
title: Advances in graphene-based electrode materials for high-performance supercapacitors: A review

description: Data for figure 5 in paper: https://doi.org/10.1016/j.est.2023.108731
DOI: 10.5281/zenodo.16652194
title: Advances in graphene-based electrode materials for high-performance supercapacitors: A review

description: Data for figure 5 in paper: https://doi.org/10.1016/j.est.2023.108731
DOI: 10.15468/dl.v5shv4
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((96 81.00856, 96.77432 81.00856, 96.77432 81.27864, 96 81.27864, 96 81.00856))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006072-250525065834625/datasets/export for details.
DOI: 10.34740/kaggle/dsv/11988751
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.3535/0ck-j7j-en8
title: Muntiacus muntjak (Zimmermann, 1780)

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/xmn-4bp-96l
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/4v7-f1l-4jy
title: Cystopteris Bernh.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rd9-vqk-qb3
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25574/24422
title: Chandra X-ray Observatory ObsId 24422

description: WR140 at apastron - a benchmark for colliding-wind binaries and plasma physics
DOI: 10.3535/xpd-x29-rx3
title: Cervidae Goldfuss, 1820

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/azh-aa4-cse
title: Bovidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/qkh-1wb-fyr
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ctn-kw4-2pb
title: Rusa C. H. Smith, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/eb7-gbm-jss
title: Bovidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25574/24591
title: Chandra X-ray Observatory ObsId 24591

description: AO-22 Calibration Observations of Mkn421
DOI: 10.3535/yvv-bf9-1f8
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/9rv-03s-w4a
title: Soulamea Lam.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/mh8-a5v-hat
title: Sus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/92h-lmk-m71
title: Bovidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/sw9-pad-dw9
title: Rhinoceros sondaicus Desmarest, 1822

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25574/24772
title: Chandra X-ray Observatory ObsId 24772

description: THE X-RAY GAS-TO-DUST ABUNDANCE RATIO OF SILICON TOWARDS GX 17+2
DOI: 10.3535/aaf-fdd-nqf
title: Bovidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/veg-wmk-w22
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/1mr-8pj-9x7
title: Maianthemum F.H.Wigg.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/fqc-fwp-3dm
title: Bovidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gsg-9f1-dhv
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25574/24788
title: Chandra X-ray Observatory ObsId 24788

description: Studying the ionised outflow in NGC 1365
DOI: 10.3535/8xd-arv-9wx
title: Rusa C. H. Smith, 1827

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jem-ptc-4q9
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.qcb2bp
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Canna indica",
 "Country is Samoa",
 "HasCoordinate is true"
 ]
}

 The dataset includes 9 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023387-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/6wc-7gv-ras
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/f9k-y7r-86b
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/ry2-m64-3kx
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/vt9-n24-p2d
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/25e-51v-qch
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/a3l-0dk-778
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/rv1-z5b-9h6
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/01t-1c1-56q
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/0sw-ez3-tp7
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/5yv-jgx-cr7
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/hbc-vey-cqc
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/z3t-s66-vwd
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/gv1-ag0-bbs
title: Bovidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/lsx-9r1-nq5
title: Bovidae Gray, 1821

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/7tf-s5l-7r4
title: Orthiopteris Copel.

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/82z-x4m-9xn
title: Cuon Hodgson, 1838

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.15468/dl.4sjpfv
title: Occurrence Download

description: A dataset containing 41 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Canna indica",
 "Country is Rwanda",
 "HasCoordinate is true"
 ]
}

 The dataset includes 41 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023385-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.3535/xkw-tg2-z1f
title: Plantae

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/g61-2gw-rn4
title: Sus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.3535/jx7-dg8-212
title: Elephas maximus Linnaeus, 1758

description: Digital Specimen for the physical specimen hosted at Naturalis Biodiversity Center.
DOI: 10.25346/s6/0z0bve/1t5kkv
title: NHFR_29830-29960X.pdf
DOI: 10.25346/s6/0z0bve/y78zas
title: NHFR_34310-34400.pdf
DOI: 10.25346/s6/0z0bve/ywxjpe
title: NHFR_30630-30780X.pdf
DOI: 10.25346/s6/0z0bve/43bx3r
title: NHFR_29240-29350.pdf
DOI: 10.25346/s6/0z0bve/aqphyf
title: NHFR_30190-30350.pdf
DOI: 10.25346/s6/0z0bve/bo0vzt
title: NHFR_34610X-34800X.pdf
DOI: 10.25346/s6/0z0bve/rsvmy6
title: NHFR_32940-33200.pdf
DOI: 10.25346/s6/0z0bve/griqkz
title: NHFR_34210-34300.pdf
DOI: 10.25346/s6/0z0bve/j74qgp
title: NHFR_31140-31320 too bright maybe.pdf
DOI: 10.25346/s6/0z0bve/fo367x
title: NHFR_29610-29820.pdf
DOI: 10.25346/s6/0z0bve/mn0oh9
title: NHFR_25710-25740.pdf
DOI: 10.25346/s6/0z0bve/jszoz3
title: NHFR_18170-18390.pdf
DOI: 10.25346/s6/0z0bve/m4pdc2
title: NHFR_28270-28500X.pdf
DOI: 10.15468/dl.tbqbxq
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is BOLD:AEH2641"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0028213-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.