cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7825742.v1
title: Table S3 from Essential role of inverted repeat in Epstein–Barr virus IR-1 in B cell transformation; geographical variation of the viral genome

description: List of genome positions from PCA that distinguish Asia, Africa, Europe, Indonesia, PNG
DOI: 10.6084/m9.figshare.7825733
title: Table S1 from Essential role of inverted repeat in Epstein–Barr virus IR-1 in B cell transformation; geographical variation of the viral genome

description: List of EBV strains with accession numbers, geographic origin and other details.
DOI: 10.6084/m9.figshare.7825733.v1
title: Table S1 from Essential role of inverted repeat in Epstein–Barr virus IR-1 in B cell transformation; geographical variation of the viral genome

description: List of EBV strains with accession numbers, geographic origin and other details.
DOI: 10.6084/m9.figshare.7825706
title: Template_NOD_NOR.xls

description: The RNA was extracted using the RNeasy kit (Quiagen, Korea). The data analysis was performed in the quiagen web portal. Fold change/regulation was calculate using 2^ (-delta ct) formula and the sample normalization was realized using the average of internal housingkeeping genes (HKG). The data analysis web portal also was used at plots volcano plot, scatter plot, heat map, clustegram and multigroup plot. The network analysis was performed using string web-based software and PCA was built in Past statistic software
DOI: 10.6084/m9.figshare.7825703
title: Impact of extra-corporeal membrane oxygenation on outcome of aluminium phosphide poisoning complicated with myocardial dysfunction

description: <b>Background:</b> Aluminium phosphide (AlP) poisoning is associated with a high mortality rate when patients are complicated with myocardial dysfunction and refractory shock or severe metabolic acidosis. We studied the role of veno-arterial extra-corporeal membrane oxygenation (VA-ECMO) in patients of AlP poisoning induced myocardial dysfunction. <b>Methods and results:</b> This is a tertiary care, single-centre, retrospective study. Between January 2011 and June 2016, total of 107 patients with AlP poisoning were identified and of those 67 were categorised in high-risk category as per the criteria. The in-hospital mortality of patients who received ECMO (<i>n</i> = 35) was compared to those who received conventional treatment (<i>n</i> = 32) only. The use of ECMO in addition to conventional treatment has reduced the in-hospital mortality from 84.4% to 40% (odds ratio: 0.47; 95% confidence interval 0.31–0.73). Among survivors, the ECMO group had a significantly lower baseline left ventricular ejection fraction (LVEF; median: 24%; IQR: 22–29 vs. median: 32%; IQR: 32–33.5; <i>p</i> p: .064) than did the conventional group. On logistic regression analysis the higher sequential organ failure assessment (SOFA) score, lower pH and the non-usage of ECMO were found to be the independent predictors of mortality. <b>Conclusion:</b> The use of ECMO in high-risk patient of AlP poisoning has resulted in a significant reduction in the mortality. A high baseline SOFA score has been found to be the independent predictor of mortality.
DOI: 10.6084/m9.figshare.7825703.v1
title: Impact of extra-corporeal membrane oxygenation on outcome of aluminium phosphide poisoning complicated with myocardial dysfunction

description: <b>Background:</b> Aluminium phosphide (AlP) poisoning is associated with a high mortality rate when patients are complicated with myocardial dysfunction and refractory shock or severe metabolic acidosis. We studied the role of veno-arterial extra-corporeal membrane oxygenation (VA-ECMO) in patients of AlP poisoning induced myocardial dysfunction. <b>Methods and results:</b> This is a tertiary care, single-centre, retrospective study. Between January 2011 and June 2016, total of 107 patients with AlP poisoning were identified and of those 67 were categorised in high-risk category as per the criteria. The in-hospital mortality of patients who received ECMO (<i>n</i> = 35) was compared to those who received conventional treatment (<i>n</i> = 32) only. The use of ECMO in addition to conventional treatment has reduced the in-hospital mortality from 84.4% to 40% (odds ratio: 0.47; 95% confidence interval 0.31–0.73). Among survivors, the ECMO group had a significantly lower baseline left ventricular ejection fraction (LVEF; median: 24%; IQR: 22–29 vs. median: 32%; IQR: 32–33.5; <i>p</i> p: .064) than did the conventional group. On logistic regression analysis the higher sequential organ failure assessment (SOFA) score, lower pH and the non-usage of ECMO were found to be the independent predictors of mortality. <b>Conclusion:</b> The use of ECMO in high-risk patient of AlP poisoning has resulted in a significant reduction in the mortality. A high baseline SOFA score has been found to be the independent predictor of mortality.
DOI: 10.6084/m9.figshare.7825706.v1
title: Template_NOD_NOR.xls

description: The RNA was extracted using the RNeasy kit (Quiagen, Korea). The data analysis was performed in the quiagen web portal. Fold change/regulation was calculate using 2^ (-delta ct) formula and the sample normalization was realized using the average of internal housingkeeping genes (HKG). The data analysis web portal also was used at plots volcano plot, scatter plot, heat map, clustegram and multigroup plot. The network analysis was performed using string web-based software and PCA was built in Past statistic software
DOI: 10.6084/m9.figshare.7825661
title: JAGS code for co-exposure interections from Transmission ecology of canine parvovirus in a multi-host, multi-pathogen system

description: Full model code for CPV and CDV interaction dynamics.
DOI: 10.6084/m9.figshare.7825676
title: Heart failure hospitalization with SGLT-2 inhibitors: a systematic review and meta-analysis of randomized controlled and observational studies

description: <b>Introduction</b>: Heart failure (HF) in type 2 diabetes mellitus (T2DM) poses a significant increase in mortality. Until recently, anti-diabetic drugs have not been shown to reduce hospitalization due to heart failure (hHF). While thiazolidinedione class and saxagliptin has shown a significantly increased risk, sodium-glucose linked co-transporter 2 inhibitors (SGLT-2Is) have demonstrated a significant reduction in the risk of hHF. <b>Areas covered</b>: We systematically searched the database of PubMed, Embase, ClinicalTrials.gov, and International conference presentation up to 25 December 2018 and retrieved all the studies that were conducted for ≥24 weeks and explicitly reported hHF outcome. Subsequently, we conducted the meta-analysis to study the effect of SGLT-2Is on hHF outcome in randomized controlled trials (RCTs), observational studies, and both. <b>Expert opinion</b>: The meta-analysis of RCTs (<i>N</i> = 34,322), observational studies (<i>N</i> = 15,36,339), and both (<i>N</i> = 15,70,661) demonstrated a significant decrease in hHF (OR 0.70, 0.64, 0.66, respectively, all <i>p</i> = 0.000) with SGLT-2Is compared to placebo or other anti-diabetes drugs in T2DM. A significant benefit in hHF (OR 0.68, <i>p</i> = 0.000) is also observed in patients with established HF (<i>N</i> = 3891) in sub-group meta-analysis of RCTs. Ongoing dedicated HF trials will further enlighten the merits of SGLT-2Is in patients with established heart failure (preserved or reduced) with or without T2DM.
DOI: 10.6084/m9.figshare.7825655
title: JAGS code for domestic-wildlife interface model from Transmission ecology of canine parvovirus in a multi-host, multi-pathogen system

description: Full model code for dog and lions CPV transmission dynamics.
DOI: 10.6084/m9.figshare.7825676.v1
title: Heart failure hospitalization with SGLT-2 inhibitors: a systematic review and meta-analysis of randomized controlled and observational studies

description: <b>Introduction</b>: Heart failure (HF) in type 2 diabetes mellitus (T2DM) poses a significant increase in mortality. Until recently, anti-diabetic drugs have not been shown to reduce hospitalization due to heart failure (hHF). While thiazolidinedione class and saxagliptin has shown a significantly increased risk, sodium-glucose linked co-transporter 2 inhibitors (SGLT-2Is) have demonstrated a significant reduction in the risk of hHF. <b>Areas covered</b>: We systematically searched the database of PubMed, Embase, ClinicalTrials.gov, and International conference presentation up to 25 December 2018 and retrieved all the studies that were conducted for ≥24 weeks and explicitly reported hHF outcome. Subsequently, we conducted the meta-analysis to study the effect of SGLT-2Is on hHF outcome in randomized controlled trials (RCTs), observational studies, and both. <b>Expert opinion</b>: The meta-analysis of RCTs (<i>N</i> = 34,322), observational studies (<i>N</i> = 15,36,339), and both (<i>N</i> = 15,70,661) demonstrated a significant decrease in hHF (OR 0.70, 0.64, 0.66, respectively, all <i>p</i> = 0.000) with SGLT-2Is compared to placebo or other anti-diabetes drugs in T2DM. A significant benefit in hHF (OR 0.68, <i>p</i> = 0.000) is also observed in patients with established HF (<i>N</i> = 3891) in sub-group meta-analysis of RCTs. Ongoing dedicated HF trials will further enlighten the merits of SGLT-2Is in patients with established heart failure (preserved or reduced) with or without T2DM.
DOI: 10.6084/m9.figshare.7825661.v1
title: JAGS code for co-exposure interections from Transmission ecology of canine parvovirus in a multi-host, multi-pathogen system

description: Full model code for CPV and CDV interaction dynamics.
DOI: 10.6084/m9.figshare.7825628
title: The perceptual effects of manipulating nonlinear phenomena in synthetic nonverbal vocalizations

description: The communicative role of nonlinear vocal phenomena remains poorly understood since they are difficult to manipulate or even measure with conventional tools. In this study parametric voice synthesis was employed to add pitch jumps, subharmonics/sidebands, and chaos to synthetic human nonverbal vocalizations. In Experiment 1 (86 participants, 144 sounds), chaos was associated with lower valence, and subharmonics with higher dominance. Arousal ratings were not noticeably affected by any nonlinear effects, except for a marginal effect of subharmonics. These findings were extended in Experiment 2 (83 participants, 212 sounds) using ratings on discrete emotions. Listeners associated pitch jumps, subharmonics, and especially chaos with aversive states such as fear and pain. The effects of manipulations in both experiments were particularly strong for ambiguous vocalizations, such as moans and gasps, and could not be explained by a non-specific measure of spectral noise (harmonics-to-noise ratio) – that is, they would be missed by a conventional acoustic analysis. In conclusion, listeners interpret nonlinear vocal phenomena quite flexibly, depending on their type and the kind of vocalization in which they occur. These results showcase the utility of parametric voice synthesis and highlight the need for a more fine-grained analysis of voice quality in acoustic research.
DOI: 10.6084/m9.figshare.7825649
title: Emotinal capability, innovation and TI

description: Fieldwork was conducted between November 2015 and May 2016, through a questionnaire sent by electronic mail to the management of 600 companies that voluntarily signed up in in a mentoring program to develop innovation capabilities, sponsored by an institution from the regional system of innovation, which articulates companies and universities. Finally, 123 valid responses were obtained with an effective participation rate of 20.5%. <br>
DOI: 10.6084/m9.figshare.7825628.v1
title: The perceptual effects of manipulating nonlinear phenomena in synthetic nonverbal vocalizations

description: The communicative role of nonlinear vocal phenomena remains poorly understood since they are difficult to manipulate or even measure with conventional tools. In this study parametric voice synthesis was employed to add pitch jumps, subharmonics/sidebands, and chaos to synthetic human nonverbal vocalizations. In Experiment 1 (86 participants, 144 sounds), chaos was associated with lower valence, and subharmonics with higher dominance. Arousal ratings were not noticeably affected by any nonlinear effects, except for a marginal effect of subharmonics. These findings were extended in Experiment 2 (83 participants, 212 sounds) using ratings on discrete emotions. Listeners associated pitch jumps, subharmonics, and especially chaos with aversive states such as fear and pain. The effects of manipulations in both experiments were particularly strong for ambiguous vocalizations, such as moans and gasps, and could not be explained by a non-specific measure of spectral noise (harmonics-to-noise ratio) – that is, they would be missed by a conventional acoustic analysis. In conclusion, listeners interpret nonlinear vocal phenomena quite flexibly, depending on their type and the kind of vocalization in which they occur. These results showcase the utility of parametric voice synthesis and highlight the need for a more fine-grained analysis of voice quality in acoustic research.
DOI: 10.6084/m9.figshare.7825649.v1
title: Emotinal capability, innovation and TI

description: Fieldwork was conducted between November 2015 and May 2016, through a questionnaire sent by electronic mail to the management of 600 companies that voluntarily signed up in in a mentoring program to develop innovation capabilities, sponsored by an institution from the regional system of innovation, which articulates companies and universities. Finally, 123 valid responses were obtained with an effective participation rate of 20.5%. <br>
DOI: 10.6084/m9.figshare.7825499
title: Land use change impacts on European heat and drought: Remote land-atmosphere feedbacks mitigated locally by shallow groundwater (DATA + CODE)

description: Input and output data associated with the following manuscript:<br>Zipper SC, J Keune, S Kollet (2019). Land use change impacts on European heat and drought: Remote land-atmosphere feedbacks mitigated locally by shallow groundwater. <em>Environmental Research Letters. </em>DOI: 10.1088/1748-9326/ab0db3<br>Includes European-scale land use/land cover input datasets corresponding to the years 1990 and 2010, associated integrated model output, and scripts necessary to make all figures in publication and analyze output data. <br><br>The file ZipperEtAl_EuropeLULCdroughtHeat_DataREADME.txt has detailed information.<br><br>Compressed using 7-zip.<br>
DOI: 10.6084/m9.figshare.7825466
title: Negative gene correlates for APOE4+ females Parietal cortex

description: Negative gene correlates for APOE4+ females, Parietal cortex
DOI: 10.6084/m9.figshare.7825499.v1
title: Land use change impacts on European heat and drought: Remote land-atmosphere feedbacks mitigated locally by shallow groundwater (DATA + CODE)

description: Input and output data associated with the following manuscript:<br>Zipper SC, J Keune, S Kollet (2019). Land use change impacts on European heat and drought: Remote land-atmosphere feedbacks mitigated locally by shallow groundwater. <em>Environmental Research Letters. </em>DOI: 10.1088/1748-9326/ab0db3<br>Includes European-scale land use/land cover input datasets corresponding to the years 1990 and 2010, associated integrated model output, and scripts necessary to make all figures in publication and analyze output data. <br><br>The file ZipperEtAl_EuropeLULCdroughtHeat_DataREADME.txt has detailed information.<br><br>Compressed using 7-zip.<br>
DOI: 10.6084/m9.figshare.7825466.v1
title: Negative gene correlates for APOE4+ females Parietal cortex

description: Negative gene correlates for APOE4+ females, Parietal cortex
DOI: 10.6084/m9.figshare.7825403
title: genome_annotation.zip

description: genome annotation of the black-necked crane genome
DOI: 10.6084/m9.figshare.7825406
title: Artifact and instructions to generate experimental results for TACAS 2019 paper: Multi-core On-the-fly Saturation

description: This artifact allows the AEC to evaluate and reproduce the experiments for the corresponding paper "Multi-Core On-The-Fly Saturation". The artifact contains all the produced data, sources and scripts to compile the data and sources.<br>
DOI: 10.6084/m9.figshare.7825406.v1
title: Artifact and instructions to generate experimental results for TACAS 2019 paper: Multi-core On-the-fly Saturation

description: This artifact allows the AEC to evaluate and reproduce the experiments for the corresponding paper "Multi-Core On-The-Fly Saturation". The artifact contains all the produced data, sources and scripts to compile the data and sources.<br>
DOI: 10.6084/m9.figshare.7825016
title: PV Power Data of Xichang.xls

description: PV Power Output Data of Xichang from Jul,18,2018 to Aug.15,2018
DOI: 10.6084/m9.figshare.7825037
title: Nomogram connecting fundamental period of a single soil layer, the depth of the layer and the shear-wave velocity of the layer

description: A nomogram connecting the fundamental period, T, of a soil layer of shear-wave velocity, Vs, and depth, H, using the formula T=4H/Vs. Also given is the fundamental frequency, f, (1/T) and the shear-modulus assuming a density (rho) of 2000kg/m^3, i.e. G=rho Vs^2 (results would be similar for the normal range of density, about 1800 to 2500kg/m^3).<br>Connect up two axes and where the line crosses the third axis is the result. An example line is shown for a fundamental period of 0.5s and a depth of 30m, which gives a shear-wave velocity of 240m/s.<br><br>Created using pynomo using a type 1 nomogram with type 8 nomograms for each of the principal axes
DOI: 10.6084/m9.figshare.7824851
title: Artifact and instructions to generate experimental results for TACAS 2019 paper: PhASAR: An Inter-Procedural Static Analysis Framework for C/C++

description: This artifact is concerned with Section 6 (Scalability) of the Paper "PhASAR: An Inter-Procedural Static Analysis Framework for C/C++" by Philipp Dominik Schubert, Ben Hermann and Eric Bodden. The artifact consists of a pre-compiled binary of the PhASAR framework, a image of the virtual machine as used for the TACAS artifact evaluation, the pre-processed target programs, all of PhASAR's required libraries, helper scripts, the complete original paper results (as produced by the authors), and an extensive description of how to reproduce the figures of Table 1 ("Program's characteristics and performance figures for analyses I/T") of the paper.<br>
DOI: 10.6084/m9.figshare.7824845
title: Comparative transcriptomics sheds light on differential adaptation and species diversification between two Melastoma species and their F1 hybrid

description: Transcriptomes assembled:-TOTAL_leaf.okay.fasta: Leaf transcriptome assembled from leaf data of M. candidum and M. sanguineum-TOTAL_flower.okay.fasta: Flower petal transcriptome assembled from petal data of M. candidum and M. sanguineum<br>-YM_leaf.okay.fasta: Leaf transcriptome assembled from leaf data of M. candidum-YM_flower.okay.fasta: Flower petal transcriptome assembled from petal data of M. candidum-MR_leaf.okay.fasta: Leaf transcriptome assembled from leaf data of M. sanguineum-MR_flower.okay.fasta: Flower petal transcriptome assembled from petal data of M. sanguineum-HY_leaf.okay.fasta: Leaf transcriptome assembled from leaf data of F1 hybrid between M. candidum and M. sanguineum-HY_flower.okay.fasta: Flower petal transcriptome assembled from petal data of F1 hybrid between M. candidum and M. sanguineum<br>custom_kaks_calculator: custom script used to calculate KaKs.
DOI: 10.6084/m9.figshare.7824851.v1
title: Artifact and instructions to generate experimental results for TACAS 2019 paper: PhASAR: An Inter-Procedural Static Analysis Framework for C/C++

description: This artifact is concerned with Section 6 (Scalability) of the Paper "PhASAR: An Inter-Procedural Static Analysis Framework for C/C++" by Philipp Dominik Schubert, Ben Hermann and Eric Bodden. The artifact consists of a pre-compiled binary of the PhASAR framework, a image of the virtual machine as used for the TACAS artifact evaluation, the pre-processed target programs, all of PhASAR's required libraries, helper scripts, the complete original paper results (as produced by the authors), and an extensive description of how to reproduce the figures of Table 1 ("Program's characteristics and performance figures for analyses I/T") of the paper.<br>
DOI: 10.6084/m9.figshare.7824845.v1
title: Comparative transcriptomics sheds light on differential adaptation and species diversification between two Melastoma species and their F1 hybrid

description: Transcriptomes assembled:-TOTAL_leaf.okay.fasta: Leaf transcriptome assembled from leaf data of M. candidum and M. sanguineum-TOTAL_flower.okay.fasta: Flower petal transcriptome assembled from petal data of M. candidum and M. sanguineum<br>-YM_leaf.okay.fasta: Leaf transcriptome assembled from leaf data of M. candidum-YM_flower.okay.fasta: Flower petal transcriptome assembled from petal data of M. candidum-MR_leaf.okay.fasta: Leaf transcriptome assembled from leaf data of M. sanguineum-MR_flower.okay.fasta: Flower petal transcriptome assembled from petal data of M. sanguineum-HY_leaf.okay.fasta: Leaf transcriptome assembled from leaf data of F1 hybrid between M. candidum and M. sanguineum-HY_flower.okay.fasta: Flower petal transcriptome assembled from petal data of F1 hybrid between M. candidum and M. sanguineum<br>custom_kaks_calculator: custom script used to calculate KaKs.
DOI: 10.6084/m9.figshare.7824767
title: Supplementary Material

description: Supplementary Figures and material and methods are provided
DOI: 10.6084/m9.figshare.7824767.v1
title: Supplementary Material

description: Supplementary Figures and material and methods are provided
DOI: 10.6084/m9.figshare.7824719
title: Data for: Tactile angle discriminability improvement: roles of training time intervals and different types of training tasks

description: Supplemental data. This data is related to Wang et. al 2019.
DOI: 10.6084/m9.figshare.7824719.v2
title: Data for: Tactile angle discriminability improvement: roles of training time intervals and different types of training tasks

description: Supplemental data. This data is related to Wang et. al 2019.
DOI: 10.6084/m9.figshare.7824671
title: Optimization Metaheuristics Framework

description: This zip contains the data and the batch teststo reproduce the experiments reported in the evaluation section of the research paper titled:<br>"Metaheuristic Optimization for Automated Process Discovery: Framework and Evaluation"A. Augusto, M. Dumas, M. La Rosa
DOI: 10.6084/m9.figshare.7824719.v1
title: Data for: Tactile angle discriminability improvement: roles of training time intervals and different types of training tasks

description: Supplemental data. This data is related to Wang et. al 2019.
DOI: 10.6084/m9.figshare.7824650
title: Microbiome 3469

description: Microbiome raw data
DOI: 10.6084/m9.figshare.7824671.v1
title: Optimization Metaheuristics Framework

description: This zip contains the data and the batch teststo reproduce the experiments reported in the evaluation section of the research paper titled:<br>"Metaheuristic Optimization for Automated Process Discovery: Framework and Evaluation"A. Augusto, M. Dumas, M. La Rosa
DOI: 10.6084/m9.figshare.7824650.v1
title: Microbiome 3469

description: Microbiome raw data
DOI: 10.26180/5c874e8727802
title: SuppFigure7

description: Raw data and statistics files to accompany supplementary figure 7 of the manuscript <b>Metformin rescues muscle function in BAG3 myofibrillar myopathy</b><b> models</b>
DOI: 10.6084/m9.figshare.7824263
title: Table S1 from Human indoor climate preferences approximate specific geographies

description: Additional information on study homes
DOI: 10.6084/m9.figshare.7824266
title: Indoor home climate data from Human indoor climate preferences approximate specific geographies

description: Monthly means of minimum air temperature [TMN, °C], mean air temperature [TMP, °C], maximum air temperature [TMX, °C], and vapor pressure [VAP, hPa]) from study homes