cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5517/ccdc.csd.cc2h9c7f
title: CCDC 2302904: Experimental Crystal Structure Determination

description: Related Article: Ya Li|2023|CSD Communication|||
description: Related Article: Ya Li, Dian Dong, Lintong Chen, Hongxuan Du, Cong Zhao, Xiaoyan Bai, Lu Chen, Yibiao Li, Xianghua Zeng, Pierre H. Dixneuf, Min Zhang|2024|Org.Lett.|26|906|doi:10.1021/acs.orglett.3c04191
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h9fmw
title: CCDC 2302978: Experimental Crystal Structure Determination

description: Related Article: Chuanzhi Liu|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.22613743.v1
title: Additional file 2 of Dynamics of the gut microbiome, IgA response, and plasma metabolome in the development of pediatric celiac disease

description: Additional file 2: Table S1. Detailed Cohort and Fecal Sample Information copy. Table S2. Complete 16S Taxonomy Data and Analysis. Table S3. Relative Abundance Analysis. Table S4. IgA Targeted ASVs in CD Progressors at 2.5 and 5. Table S5. Calculated ICI scores for each taxon. Table S6. Significantly Altered Plasma Metabolites. Table S7. Metabolic Pathway Pearson Correlation. Table S8. List of Flow cytometry antibodies.
DOI: 10.5517/ccdc.csd.cc2h9hgs
title: CCDC 2303035: Experimental Crystal Structure Determination

description: Related Article: Shaoyu Mai|2023|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.22607438.v1
title: Additional file 1 of Brassinosteroids and gibberellic acid actively regulate the zinc detoxification mechanism of Medicago sativa L. seedlings

description: Additional file 1: Table S1. The primer sequences of the genes. Table S2. Spearman's Rho among different indexes such as zinc content, biomass and antioxidant enzymes. Table S3. Total variance explained of principal component analysis for all indicators. Table S4. Component Matrixa of principal component analysis for all indicators.
DOI: 10.5517/ccdc.csd.cc2hcsh5
title: CCDC 2305237: Experimental Crystal Structure Determination

description: Related Article: Yugo Kato, Kazutoshi Nishimura, Yuji Nishii, Koji Hirano|2024|Chemical Science|15|2112|doi:10.1039/D3SC05977D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2hcsj6
title: CCDC 2305238: Experimental Crystal Structure Determination

description: Related Article: Yugo Kato, Kazutoshi Nishimura, Yuji Nishii, Koji Hirano|2024|Chemical Science|15|2112|doi:10.1039/D3SC05977D
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.22613758
title: Additional file 2 of A novel polypeptide encoded by the circular RNA ZKSCAN1 suppresses HCC via degradation of mTOR

description: Additional file 2.
DOI: 10.6084/m9.figshare.22613785
title: Additional file 6 of Phylogeny and adaptive evolution of subgenus Rhizirideum (Amaryllidaceae, Allium) based on plastid genomes

description: Additional file 6: Table S5 & S6 Table S4. Codon usage of protein-coding genes of the thirteen Rhizirideum plastomes. Table S5. RSCU values of protein-coding genes of the thirteen Rhizirideum plastomes.
DOI: 10.6084/m9.figshare.22613773.v1
title: Additional file 2 of Phylogeny and adaptive evolution of subgenus Rhizirideum (Amaryllidaceae, Allium) based on plastid genomes

description: Additional file 2: Table S1. Current species in subgenus Rhizirideum (Bold fonts show the thirteen species selected in our study).
DOI: 10.6084/m9.figshare.7409456.v1
title: MOESM1 of The plasma peptidome

description: Additional file 1. Supplemental Table I. The tryptic peptidome of human EDTA plasma.
DOI: 10.21223/n00mnu
title: Dataset for: Preliminary trial for late blight assessment in HERLB population (First trial_Oxapampa)

description: "An open-field trial was conducted in Oxapampa, Peru, at an elevation of 1810 meters above sea level during the rainy season of 2022 to assess the Late Blight (LB) response in the HERLB population. This population originated from crosses between advanced clones, referred to as LBHT, and HER clones (4x hybrids obtained from pre-breeding). The evaluation encompassed 2996 genotypes, organized in a row-column statistical design with four plants per plot and no replication. The varieties included in the trial had a known response to late infection, with Kory, Amarilis, and Yungay representing high resistance, moderate resistance, and susceptibility to LB, respectively. At 40 days after planting (DAP), a meticulous recording of the percentage of leaf area affected by late blight infection per plot was undertaken throughout the season. Subsequently, the area under the disease progress curve (AUDPC) was calculated, offering a comprehensive measure of the impact of late blight infection."
DOI: 10.21223/n00mnu/dzodny
title: 01_Fieldbook_HERLB_PER_2022_LateBlight_Oxa.tab

description: :unav
DOI: 10.6084/m9.figshare.22613788
title: Additional file 7 of Phylogeny and adaptive evolution of subgenus Rhizirideum (Amaryllidaceae, Allium) based on plastid genomes

description: Additional file 7: Table S7. The repeat sequence distribution in the thirteen Rhizirideum plastomes.
DOI: 10.6084/m9.figshare.22613779
title: Additional file 4 of Phylogeny and adaptive evolution of subgenus Rhizirideum (Amaryllidaceae, Allium) based on plastid genomes

description: Additional file 4: Table S3. List of species and their accession numbers in GenBank included in the phylogenetic analysis (species in bold are from our team).
DOI: 10.6084/m9.figshare.7409468.v1
title: MOESM2 of The plasma peptidome

description: Additional file 2. Supplemental Table II.Â  The interleukins, growth factors, cytokines, chemokines and necrosis factors of human EDTA plasma.
DOI: 10.6084/m9.figshare.22613791.v1
title: Additional file 8 of Phylogeny and adaptive evolution of subgenus Rhizirideum (Amaryllidaceae, Allium) based on plastid genomes

description: Additional file 8: Table S8. Simple sequence repeats (SSRs) distribution in the thirteen Rhizirideum plastomes.
DOI: 10.6084/m9.figshare.22613794.v1
title: Additional file 9 of Phylogeny and adaptive evolution of subgenus Rhizirideum (Amaryllidaceae, Allium) based on plastid genomes

description: Additional file 9: Table S9. Results of selective pressure analysis in EasycodeMl with the branch-site model.
DOI: 10.6084/m9.figshare.22613785.v1
title: Additional file 6 of Phylogeny and adaptive evolution of subgenus Rhizirideum (Amaryllidaceae, Allium) based on plastid genomes

description: Additional file 6: Table S5 & S6 Table S4. Codon usage of protein-coding genes of the thirteen Rhizirideum plastomes. Table S5. RSCU values of protein-coding genes of the thirteen Rhizirideum plastomes.
DOI: 10.6084/m9.figshare.22613776.v1
title: Additional file 3 of Phylogeny and adaptive evolution of subgenus Rhizirideum (Amaryllidaceae, Allium) based on plastid genomes

description: Additional file 3: Table S2. List of common CDSs in thirteen Rhizirideum plastomes for phylogenetic reconstrucion.
DOI: 10.6084/m9.figshare.22613810
title: Additional file 2 of Apolipoprotein C3 is negatively associated with estrogen and mediates the protective effect of estrogen on hypertriglyceridemia in obese adults

description: Additional file 2. Supplementary Table 2. Liner regressionanalysis for the association of ApoC3 levels (dependent variable) and E2 levels(independent variables) with or without dyslipidemia.
DOI: 10.6084/m9.figshare.22613846.v1
title: Additional file 8 of RNA-seq analysis reveals the critical role of the novel lncRNA BIANCR in intramuscular adipogenesis through the ERK1/2 signaling pathway

description: Additional file 8. GO terms and KEGG pathways for DELs.
DOI: 10.6084/m9.figshare.22613776
title: Additional file 3 of Phylogeny and adaptive evolution of subgenus Rhizirideum (Amaryllidaceae, Allium) based on plastid genomes

description: Additional file 3: Table S2. List of common CDSs in thirteen Rhizirideum plastomes for phylogenetic reconstrucion.
DOI: 10.6084/m9.figshare.22613855.v1
title: Additional file 11 of RNA-seq analysis reveals the critical role of the novel lncRNA BIANCR in intramuscular adipogenesis through the ERK1/2 signaling pathway

description: Additional file 11. GO terms and KEGG pathways for BIANCR.
DOI: 10.6084/m9.figshare.22613810.v1
title: Additional file 2 of Apolipoprotein C3 is negatively associated with estrogen and mediates the protective effect of estrogen on hypertriglyceridemia in obese adults

description: Additional file 2. Supplementary Table 2. Liner regressionanalysis for the association of ApoC3 levels (dependent variable) and E2 levels(independent variables) with or without dyslipidemia.
DOI: 10.6084/m9.figshare.7409471
title: MOESM3 of The plasma peptidome

description: Additional file 3: Table S3. ANOVA and Tukey Kramer HSD test.
DOI: 10.6084/m9.figshare.22613825
title: Additional file 1 of RNA-seq analysis reveals the critical role of the novel lncRNA BIANCR in intramuscular adipogenesis through the ERK1/2 signaling pathway

description: Additional file 1. Reads information of RNA-seq.
DOI: 10.6084/m9.figshare.22613831
title: Additional file 3 of RNA-seq analysis reveals the critical role of the novel lncRNA BIANCR in intramuscular adipogenesis through the ERK1/2 signaling pathway

description: Additional file 3. Antibody information.
DOI: 10.6084/m9.figshare.22613846
title: Additional file 8 of RNA-seq analysis reveals the critical role of the novel lncRNA BIANCR in intramuscular adipogenesis through the ERK1/2 signaling pathway

description: Additional file 8. GO terms and KEGG pathways for DELs.
DOI: 10.6084/m9.figshare.22607441
title: Additional file 2 of Brassinosteroids and gibberellic acid actively regulate the zinc detoxification mechanism of Medicago sativa L. seedlings

description: Additional file 2:Table 1. Effects of different treatments on Medicago sativa L. biomass (Fresh weight, mg/plant). Table 2. Effects of different treatments on Medicago sativa L. Zinc content (μg/g). Table 3. Effects of different treatments on Medicago sativa L. MDA content (nmol/g). Table 4. Effects of different treatments on Medicago sativa L. OFR content (nmol/g). Table 5. Effects of different treatments on Medicago sativa L. OFR generation rate (U/g min). Table 6. Effects of different treatments on Medicago sativa L. SOD acitivity (U/g min). Table 7. Effects of different treatments on Medicago sativa L. POD acitivity (U/g min). Table 8. Effects of different treatments on Medicago sativa L. CAT acitivity (U/g min). Table 9. Effects of different treatments on genes relative expression in Medicago sativa L.
DOI: 10.6084/m9.figshare.22613782
title: Additional file 5 of Phylogeny and adaptive evolution of subgenus Rhizirideum (Amaryllidaceae, Allium) based on plastid genomes

description: Additional file 5: Table S4. Collection locality and voucher information of twelve sequenced plastomes.
DOI: 10.6084/m9.figshare.6885164
title: Combination of entecavir with thymosin alpha-1 in HBV-related compensated cirrhosis: a prospective multicenter randomized open-label study

description: <b>Background</b>: Thymosin alpha-1 (Ta-1) suppresses HBV viral replication, while the evidence of combination effect with nucleoide is still limited. We aimed to investigate the efficacy and safety of combination therapy of Ta-1 with entecavir (ETV) in patients with compensated liver cirrhosis. <b>Research design and methods</b>: A total of 690 patients were randomized to receive Ta-1 plus ETV (n = 351) or ETV monotherapy (n = 339) for 52 weeks after 26 weeks of ETV treatment, followed by continued entecavir therapy. The primary endpoint was defined as liver decompensation, hepatocellular carcinoma (HCC) or death. <b>Results</b>: The median followed up was 38.2 months. The cumulative incidence of liver decompensation, HCC, or death were similar between two groups. During the Ta-1 combination treatment, the HCC incidence was 1.7% in combination group and 2.1% in ETV group, without new HCC cases developed during week 39 to week 77 in combination group. The virologic response, serologic response, biochemical response was similar between two groups at week 104. Both therapies were well-tolerated. <b>Conclusion</b>: There was no significant difference between two groups in endpoint events, while combination therapy with Ta-1 has a tendency to inhibit the development of HCC.
DOI: 10.6084/m9.figshare.6885164.v1
title: Combination of entecavir with thymosin alpha-1 in HBV-related compensated cirrhosis: a prospective multicenter randomized open-label study

description: <b>Background</b>: Thymosin alpha-1 (Ta-1) suppresses HBV viral replication, while the evidence of combination effect with nucleoide is still limited. We aimed to investigate the efficacy and safety of combination therapy of Ta-1 with entecavir (ETV) in patients with compensated liver cirrhosis. <b>Research design and methods</b>: A total of 690 patients were randomized to receive Ta-1 plus ETV (n = 351) or ETV monotherapy (n = 339) for 52 weeks after 26 weeks of ETV treatment, followed by continued entecavir therapy. The primary endpoint was defined as liver decompensation, hepatocellular carcinoma (HCC) or death. <b>Results</b>: The median followed up was 38.2 months. The cumulative incidence of liver decompensation, HCC, or death were similar between two groups. During the Ta-1 combination treatment, the HCC incidence was 1.7% in combination group and 2.1% in ETV group, without new HCC cases developed during week 39 to week 77 in combination group. The virologic response, serologic response, biochemical response was similar between two groups at week 104. Both therapies were well-tolerated. <b>Conclusion</b>: There was no significant difference between two groups in endpoint events, while combination therapy with Ta-1 has a tendency to inhibit the development of HCC.
DOI: 10.6084/m9.figshare.22613791
title: Additional file 8 of Phylogeny and adaptive evolution of subgenus Rhizirideum (Amaryllidaceae, Allium) based on plastid genomes

description: Additional file 8: Table S8. Simple sequence repeats (SSRs) distribution in the thirteen Rhizirideum plastomes.
DOI: 10.15468/dl.zznr9t
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Astragalus magnificus Kolak.)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095306-240626123714530/datasets/export for details.
DOI: 10.15468/dl.6gc7zn
title: Occurrence Download

description: A dataset containing 84 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Carabus fabricii Panzer, 1810",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 84 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095305-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h8jpsx
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Alopecosa orotavensis (Strand, 1916)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095307-240626123714530/datasets/export for details.
DOI: 10.15468/dl.yd2pex
title: Occurrence Download

description: A dataset containing 372 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Salda littoralis (Linnaeus, 1758)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 372 records from 57 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095308-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.96hdz5
title: Occurrence Download

description: A dataset containing 4008 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Carrhotus xanthogramma (Latreille, 1819)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 4008 records from 247 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095309-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2k7z85
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Astragalus bylowae Elenevsky)",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2000",
 "BasisOfRecord is one of (Human Observation, Observation, Machine Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 100",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095310-240626123714530/datasets/export for details.
DOI: 10.15468/dl.snt3zz
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Carabus hampei Kuster, 1846",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 5 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095311-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/0vqjde
title: rmqs1_16S_otu_reference_sequence.fasta.gz

description: core sequence for each OTU (gzipped)
DOI: 10.57745/5gsrg4
title: rmqs1_16S_otu_taxonomy.tsv

description: otu taxonomy (tabulated file)
DOI: 10.57745/mydmxu
title: rmqs1_16S_otu_abundance.tsv.gz

description: otu per sample matrix (gzipped)
DOI: 10.15468/dl.tfnquy
title: Occurrence Download

description: A dataset containing 248 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Saldula palustris (Douglas, 1874)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 248 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095312-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9grsnv
title: Occurrence Download

description: A dataset containing 1278 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Alopecosa taeniata (C.L.Koch, 1835)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 1278 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095313-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jnbba6
title: Occurrence Download

description: A dataset containing 2519 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Myrmarachne formicaria (De Geer, 1778)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 2519 records from 183 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0095316-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.