cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25550/v8g
title: Gene expression microarray - mouse E9.5 Olfactory Placode

description: Gene expression microarray using tissue obtained by laser capture microdissection (LCM) from the Olfactory Placode of mouse embryos at E9.5 See links to Genome Browser in the Additional Information section.
DOI: 10.25550/vgg
title: Gene expression microarray - mouse E10.5 various tissues

description: Gene expression microarray data using tissue captured by Laser Capture Microdissection from the following sites: laternal-nasal eminence, medial-nasal eminence, olfactory pit, Rathke's pouch, and the epithelial. See links to Genome Browser in the Additional Information section. This track represents 31 independent samples of different regions of developing craniofacial structures obtained from embryonic day 10.5 and 11.5 mouse embryos.
DOI: 10.25550/vh0
title: Skull vault formation in individual Chi-/+ fish

description: An individual fish was imaged successively from 14-36 dpf by confocal microscopy, during the period of induction and growth of the frontal and parietal bones. The fish was transgenic for col1a1a:gfp, marking chondrocytes, and for sp7:mcherry, marking osteoblasts. The fish was a heterozygous mutant for Chihuahua, and mutation in the col1a1a gene that models human Osteogenesis Imperfecta.
DOI: 10.25550/vkg
title: microCT - Bone Tissue of C57BL6J mouse at E17.5

description: Mouse ID: JI206 This dataset includes a microCT scan of the skull of a C57BL6J mouse at E17.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/vw2
title: microCT - Cranial tissue of C57BL6J mouse at E18.5

description: This dataset includes microCT scans of the cranial tissue of C57BL6/J mouse embryos at stage E18.5. The files are in NIfTi format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/vy2
title: microMRI images of skulls of Myf5Cre * Smad4fl/fl mice at P0

description: microMRI images of skulls of Myf5Cre * Smad4fl/fl mice at P0. The dataset contains 3-D images in niftii format for each of 5 mice.
DOI: 10.7910/dvn/kximtv/5msxix
title: Study Data Set GTD RAND Final 25082019.tab

description: Chemical, Biological and Radiological Terrorist Attacks 1970-2017 GTD and RDWTI
DOI: 10.25550/25sg
title: MicroCT-Skull Wnt1-Cre;Alk5fl/fl mouse at P0

description: This dataset includes 1 microCT scan of the skull of a Wnt1-Cre;Alk5fl/fl mouse at P0 (YC390CCMB). The scan is in NiFTI format, which can be read by a number of free software applications including those listed below. To receive the scan in DICOM format, please email help@facebase.org. The following programs allow you to load and explore files in NiFTI format: – ImageJ, a java-based program that runs on most operating systems, including MAC OSX – MBAT, from the Laboratory of Neural Imaging at USC – Mango, from Neuroimaging Informatics Tools and Resources Clearinghouse, offers desktop, web, and iPad-compatible versions. – MRIcro, which runs on Windows and Linux systems.
DOI: 10.25550/tnc
title: Skull vault formation in individual WT AB Fish

description: An individual fish was imaged successively from 11-23 dpf by confocal microscopy, during the period of induction and growth of the frontal and parietal bones. The fish was transgenic for col1a1a:gfp, marking chondrocytes, and for sp7:mcherry, marking osteoblasts.
DOI: 10.25550/tp6
title: Micro-CT images of adult mouse skulls, Collaborative Cross NOD x CAST

description: The dataset consists of a set of images for 21 mice with one parent from the NOD strain, and the other from the CAST strain. For each mouse we provide an image file in .aim format, a .txt file with the image data, and a .hx file. Morphometrics will be added for the data as measurements are completed.
DOI: 10.25550/tx4
title: 3D Facial Images - Tanzania

description: This dataset contains landmark and descriptive data for Tanzanian 3D facial landmarking. Obj files for the corresponding landmarks are also available upon request. **This is restricted-access human data.** To gain access to this data, you must first go through the [process outlined here](/odocs/data-guidelines/).
DOI: 10.25550/v5g
title: microCT - Soft Tissue of Wnt1-Cre;Tgfbr2flfl;Alk5fl+ mouse at E18.5

description: This dataset includes 1 microCT scan of the skull of a Wnt1-Cre; Tgfbr2flfl; Alk5fl+ mouse at E18.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/vf0
title: microCT - Skull of Wnt1-Cre;Tgfbr2fl/fl mouse at E18.5

description: This dataset includes 1 microCT scan of the skull of a Wnt1-Cre;Tgfbr2fl/fl mouse at E18.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/vtg
title: Gene expression microarray - mouse E10.5 mandibular arch

description: Gene expression microarray using tissue obtained by laser capture microdissection (LCM) from the mandibular arch of mouse embryos at E10.5. The results are also presented as tracks on the Genome Browser (see links in the Additional Information section).
DOI: 10.34725/dvn/g42gsd/1hv9gj
title: 5. Indicators_Variable_labels-1.tab

description: Description of variables that have been generated in the livelihood indicators.
DOI: 10.34725/dvn/g42gsd/4mtfex
title: 0. Disclaimer.pdf

description: Disclaimer for data use.
DOI: 10.34725/dvn/g42gsd/7s9fqj
title: 0. Disclaimer.pdf

description: Disclaimer for data use.
DOI: 10.34725/dvn/g42gsd/fcupi3
title: 2. Sentinel landscape household module.7z

description: CSPro Data Entry Application developed for data entry in the Nicaragua-Honduras SL.
DOI: 10.34725/dvn/g42gsd/fjnunu
title: 6. NH_Indicators.Rmd

description: R script used for the calculation of the livelihood indicators.
DOI: 10.34725/dvn/g42gsd/pes9z9
title: 0. Disclaimer.pdf

description: Disclaimer for data use.
DOI: 10.34725/dvn/ytnej6/0czh3k
title: 2. SL-HH INSTRUMENT.7z

description: CSPro data entry form developed for data entry in the Western Amazon SL.
DOI: 10.34725/dvn/ytnej6/boc8eh
title: 0. Disclaimer.pdf

description: Disclaimer for data use.
DOI: 10.34725/dvn/ytnej6/ctrkdq
title: 0. Disclaimer.pdf

description: Disclaimer for data use.
DOI: 10.34725/dvn/ytnej6/e4pxjs
title: 2. SL-HH INSTRUMENT.7z

description: CSPro data entry form developed for data entry in the Western Amazon SL.
DOI: 10.34725/dvn/ytnej6/mfuruo
title: 1. SL-HH INSTRUMENT final 30102013SP-JP.docx

description: This is the household questionnaire that was developed for data collection in the Western Amazon SL.
DOI: 10.34725/dvn/ytnej6/npjxcb
title: 3.WAM_Household_Raw-STATA.tab

description: Stata data file for raw household data.
DOI: 10.34725/dvn/ytnej6/t0nawg
title: 2. SL-HH INSTRUMENT.7z

description: CSPro data entry form developed for data entry in the Western Amazon SL.
DOI: 10.34725/dvn/ytnej6/utvhxy
title: 4. WA_Computed_Indicators_Data_2016-01-15.tab

description: Calculated livelihood indicators for the Western Amazon SL.
DOI: 10.5281/zenodo.3441613
title: Transient electromagnetic data de-noising

description: The synthetic datasets for the LSTM-autoencoder training and the field dataset.
DOI: 10.5281/zenodo.3441614
title: Transient electromagnetic data de-noising

description: The synthetic datasets for the LSTM-autoencoder training and the field dataset.
DOI: 10.25550/tj8
title: Micro-CT images of adult mouse skulls, Collaborative Cross 129S1 x NOD

description: The dataset consists of a set of images for 11 mice with one parent from the 129S1 strain, and the other parent from the NOD strain. For each mouse we provide an image file in .aim format, a .txt file with the image data, and a .hx file. Morphometrics will be added for the data as measurements are completed
DOI: 10.25550/tkt
title: microCT - Soft Tissue of Msx1 Control Mice at E16.5

description: This dataset includes microCT scans of the skulls of Msx1 Contro mice. The scans are in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/twa
title: microCT - Bone Tissue of Msx1-- Mice at E16.5

description: This dataset includes microCT scans of the skulls of Msx1-- mice at E16.5 . The scans are in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/v0r
title: Gene expression RNA-Seq - mouse E14.5 Wild Type Anterior Oral Palate

description: This data set contains FASTQ RNA-Seq data for the Anterior Oral region of the palatal shelves at the E14.5 time-point in the developing mouse. Wild-type CD-1 outbred mice were used in this experiment. For each different region: Anterior Medial Palate - From the anterior region of the palatal shelf (closer to the front of the face). Also closer to the center of the palatal shelves (closer to the Medial-Edge Epithelia). Posterior Medial Palate - From the posterior region of the palatal shelf (closer to the hind-brain). Also located closer to the center of the palatal shelves (closer to the MEE). Anterior Lateral Palate - From the anterior region of the palatal shelf (closer to the front of the face). The lateral region located further from the MEE. Posterior Lateral Palate - From the posterior region of the palatal shelf (closer to the hind-brain). The lateral region located further from the MEE. Anterior Nasal Palate - From the anterior region of the palatal shelf (closer to the front of the face). The nasal half of the palate located closer to the nose. Posterior Nasal Palate - From the posterior region of the palatal shelf (closer to the hind-brain). The nasal half of the palate located closer to the nose. Anterior Oral Palate - From the anterior region of the palatal shelf (closer to the front of the face). The oral half of the palate located closer to the tongue. Posterior Oral Palate - From the posterior region of the palatal shelf (closer to the hind-brain). The oral half of the palate located closer to the tongue. There are 3 replicates for each region collected (four for the ant. nasal region). Regions were isolated using Laser Capture Microdissection with the Arcturus Veritas instrument, then RNA-purified and processed for RNA Seq. The RNA-Seq was performed using 50 bp single-end reads (at least 20 million reads). Sequencing was performed on the Illumina HiSeq 2500.
DOI: 10.25550/v14
title: microCT - Soft Tissue of a Ctgf+/+ Control mouse at E14.5

description: Mouse ID: CP262 This dataset includes microCT scans of the skull of a Ctgf+/+ Control mouse at E14.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/v5c
title: microCT - Bone Tissue of a Ctgf-/- mouse at P0

description: Mouse ID: CP045 This dataset includes microCT scans of the skull of a Ctgf-/- mouse at P0. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/vpr
title: Gene expression RNA-Seq - mouse E14.5 Wild Type Anterior Nasal Palate

description: This data set contains BAM RNA-Seq data for the Anterior Nasal region of the palatal shelves at the E14.5 time-point in the developing mouse. Wild-type CD-1 outbred mice were used in this experiment. For each different region: Anterior Medial Palate - From the anterior region of the palatal shelf (closer to the front of the face). Also closer to the center of the palatal shelves (closer to the Medial-Edge Epithelia). Posterior Medial Palate - From the posterior region of the palatal shelf (closer to the hind-brain). Also located closer to the center of the palatal shelves (closer to the MEE). Anterior Lateral Palate - From the anterior region of the palatal shelf (closer to the front of the face). The lateral region located further from the MEE. Posterior Lateral Palate - From the posterior region of the palatal shelf (closer to the hind-brain). The lateral region located further from the MEE. Anterior Nasal Palate - From the anterior region of the palatal shelf (closer to the front of the face). The nasal half of the palate located closer to the nose. Posterior Nasal Palate - From the posterior region of the palatal shelf (closer to the hind-brain). The nasal half of the palate located closer to the nose. Anterior Oral Palate - From the anterior region of the palatal shelf (closer to the front of the face). The oral half of the palate located closer to the tongue. Posterior Oral Palate - From the posterior region of the palatal shelf (closer to the hind-brain). The oral half of the palate located closer to the tongue. There are 3 replicates for each region collected (four for the ant. nasal region). Regions were isolated using Laser Capture Microdissection with the Arcturus Veritas instrument, then RNA-purified and processed for RNA Seq. The RNA-Seq was performed using 50 bp single-end reads (at least 20 million reads). Sequencing was performed on the Illumina HiSeq 2500.
DOI: 10.25550/vq4
title: Internasal suture, WT and Fgfr2+/S252W (Apert syndrome mouse model), E16.5 and E18.5

description: RNA-Seq libraries are from laser capture microdissections of C57BL/6J Fgfr2+/+ (W) and C57BL/6J Apert syndrome EIIA-Cre+;Fgfr2+/S252W (A) mice, at development stages TS24/E16.5 (6) and TS26/E18.5 (8), from the internasal suture (IN), with 5 biological replicates (1-5), of the suture mesenchyme (SM) and nasal bone osteogenic front (NA). “W8IN1SM”, for example, indicates WT, E18.5, nasal suture, replicate 1, suture mesenchyme.
DOI: 10.25550/vr8
title: Transgenic Mouse Enhancer Assay - Vista Enhancer ID: mm398

description: See link to the data preparation protocols for this study in the Additional Information section See links to Genome Browser in the Additional Information section. **Enhancer location:** Mouse genome mm9, chr6: 4433466-4435322 **Name:** mCF84 **Vista Enhancer ID:** mm398 **Nearest craniofacial gene or locus:** Col1A2 **Enhancer expression:** other This data set includes the following: * A .pdf file that summarizes the whole-mount data for the tested element. This file includes light microscopy whole-mount images of the LacZ reporter gene expression in mouse embryos, a summary of the annotation of the expression pattern, the DNA sequence of the tested element in Fasta format, and the sequences of the primers used to generate the test construct. Follow corresponding link in the Additional Information section to see this information in the Vista Enhancer Browser at Lawrence Berkeley Laboratory * Tested element.txt: Download the text file mCF84metadata.txt from the External Reference section
DOI: 10.34725/dvn/g42gsd/3a2y7r
title: 4. NH_Computed_Indicators_Data_2016-01-15.tab

description: Calculated livelihood indicators for the Nicaragua-Honduras SL.
DOI: 10.34725/dvn/g42gsd/3titk0
title: 5. Indicators_Variable_labels.tab

description: Description of variables that have been generated in the livelihood indicators.
DOI: 10.34725/dvn/g42gsd/4wn3q9
title: 3. NH_Household_Ver.tab

description: Cleaned and verified household data that was collected in the Nicaragua-Honduras SL.
DOI: 10.34725/dvn/g42gsd/ai0k1d
title: 1. SL-HH INSTRUMENT ES 20-9-2013.docx

description: This is the household questionnaire that was developed for data collection in the Nicaragua-Honduras SL.
DOI: 10.34725/dvn/g42gsd/ep56xh
title: Disclaimer.pdf

description: Disclaimer
DOI: 10.34725/dvn/g42gsd/fkodpo
title: 7. NH-indicator-guide.pdf

description: NH-indicator-guide
DOI: 10.34725/dvn/g42gsd/jl66mz
title: SL_NicaHond_Indicators.R

description: Nicaragua- Honduras Household indicators (R scripts)
DOI: 10.34725/dvn/g42gsd/pn5kj4
title: 7. NH-indicator-guide.pdf

description: NH-indicator-guide
DOI: 10.34725/dvn/g42gsd/wqlcqm
title: Sentinel landscape household module.7z

description: CSPro Data Entry Application - Nicaragua-Honduras
DOI: 10.34725/dvn/ytnej6/6pky1q
title: Generic Codebook.tab

description: Description of variables for the household data.
DOI: 10.34725/dvn/ytnej6/e251dr
title: 3. WAM_Household_Raw.tab

description: Raw data that was collected in the Western Amazon SL.
DOI: 10.34725/dvn/ytnej6/ezgdcv
title: 3.WAM_Household_Raw-SPSS-1.tab

description: SPSS data file for raw household data.
DOI: 10.34725/dvn/ytnej6/ixnmn9
title: 3. WAM_Household_ver.tab

description: Cleaned and verified data that was collected in the Western Amazon SL.
DOI: 10.34725/dvn/ytnej6/jn56ga
title: 7.WAM-indicator-guide_29_Aug.pdf

description: Western Amazon Indicator Guide
DOI: 10.34725/dvn/ytnej6/otbi5t
title: 4. WA_Computed_Indicators_Data_2016-01-15.tab

description: Calculated livelihood indicators for the Western Amazon SL.
DOI: 10.34725/dvn/ytnej6/q4iz6m
title: 3.WAM_Household_ver.tab

description: Cleaned and verified household data for the Western Amazon SL.
DOI: 10.34725/dvn/ytnej6/z06pld
title: 4.WAM_Household_ver-1.tab

description: Cleaned and verified household data for the Western Amazon SL.
DOI: 10.25550/1-70k6
title: Activity of predicted mouse neural crest enhancer near Zfhx4 in E13.5 transgenic mouse embryos– Tg(mm10_chr3:5467722-5468518::LacZ).

description: Tg(mm10_chr3:5467722-5468518::LacZ) demonstrates no reproducible enhancer activity at E13.5, with only weak staining in the neural tube.
DOI: 10.25550/26hg
title: ChIP-seq of multiple histone marks and RNA-seq from CS18 human embryonic face tissue

description: ChIP-seq, RNA-seq and ATAC-seq to identify non-coding regulatory elements (enhancers) active during craniofacial development. This record contains sequencing data from one CS18 sample; multiple embryos at CS18 and other stages of human development are being sequenced in parallel. **This is restricted-access human data.** To gain access to this data, you must first go through the [process outlined here](/odocs/data-guidelines/).
DOI: 10.25550/tvr
title: microCT - Soft Tissue of Tgfbr2fl/+ Control mouse at E18.5

description: Mouse ID: JI216 This dataset includes 1 microCT scan of the skull of a Tgfbr2fl/+ control mouse at E18.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/v7c
title: microCT - Bone Tissue of Wnt1-Cre;Tgfbr2flfl;Alk5fl+ mouse at E16.5

description: Mouse ID: JI220 This dataset includes microCT scans of the skull of a Wnt1-Cre;Tgfbr2flfl;Alk5fl+ mouse at E16.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/v92
title: Micro-CT images of adult mouse skulls, Collaborative Cross NOD x NOD

description: The dataset consists of a set of images for 11 mice with both parents from the NOD strain. For each mouse we provide an image file in .aim format, a .txt file with the image data, and a .hx file. Morphometrics will be added for the data as measurements are completed.
DOI: 10.25550/vaw
title: Micro-CT images of adult mouse skulls, Collaborative Cross 129S1 x NZO

description: The dataset consists of a set of images for 7 mice with one parent from the 129S1 strain and the other from the NZO strain. For each mouse we provide an image file in .aim format, a .txt file with the image data, and a .hx file. Morphometrics will be added for the data as measurements are completed.
DOI: 10.25550/vcw
title: microCT - Soft Tissue of C57BL6J mouse at E17.5

description: This dataset includes 1 microCT scan of the skull of a C57BL6J mouse at E17.5. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format
DOI: 10.25550/vd4
title: Micro-CT images of adult mouse skulls, Collaborative Cross 129S1 x CAST

description: The dataset consists of a set of images for 9 mice with one parent from the 129S1 strain, and the other from the CAST strain. For each mouse we provide an image file in .aim format, a .txt file with the image data, and a .hx file. Morphometrics will be added for the data as measurements are completed.
DOI: 10.25550/vee
title: Micro-CT images of adult mouse skulls, Collaborative Cross NZO x 129S1

description: The dataset consists of a set of images for 23 mice with one parent from the NZO strain, and the other parent from the 129S1 strain. For each mouse we provide an image file in .aim format, a .txt file with the image data, and a .hx file. Morphometrics will be added for the data as measurements are completed.
DOI: 10.25550/vqe
title: Gene expression microarray - Mouse E9.5 - Mandibular prominence

description: Gene expression microarray using tissue obtained by laser capture microdissection (LCM) from the mandibular arch of mouse embryos at E9.5. See links to Genome Browser in the Additional Information section.
DOI: 10.34725/dvn/g42gsd/5wafp8
title: 4. NH_Computed_Indicators_Data_2016-01-15.tab

description: Calculated livelihood indicators for the Nicaragua-Honduras SL.
DOI: 10.34725/dvn/g42gsd/81ob4m
title: 3. NH_Household_Raw.tab

description: Raw data file from CSPro that was collected in the Nicaragua-Honduras SL.
DOI: 10.34725/dvn/g42gsd/col57x
title: Sentinel landscape household module.7z

description: CSPro Data Entry Application - Nicaragua-Honduras
DOI: 10.34725/dvn/g42gsd/dsxvjk
title: 6. NH_Indicators.Rmd

description: R script used for the calculation of the livelihood indicators.
DOI: 10.34725/dvn/g42gsd/gdbo5s
title: 4. NH_Household_Ver.csv

description: Cleaned and verified household data that was collected in the Nicaragua-Honduras SL.
DOI: 10.34725/dvn/g42gsd/i9dlxz
title: 5. NH_Computed_Indicators_Data_2016-01-15.tab

description: Calculated livelihood indicators for the Nicaragua-Honduras SL.
DOI: 10.34725/dvn/g42gsd/jqkerw
title: 0. Disclaimer.pdf

description: Disclaimer for data use.
DOI: 10.34725/dvn/g42gsd/muomr4
title: SL-HH INSTRUMENT ES 20-9-2013.docx
DOI: 10.34725/dvn/g42gsd/nmxfoe
title: NH_Household_Raw.csv

description: Raw data file from CSPro
DOI: 10.34725/dvn/ytnej6/2ew5xz
title: 1. SL-HH INSTRUMENT final 30102013SP-JP.docx

description: This is the household questionnaire that was developed for data collection in the Western Amazon SL.
DOI: 10.34725/dvn/ytnej6/5p26ji
title: 3. WAM_Household_Raw.tab

description: Raw data that was collected in the Western Amazon SL.
DOI: 10.34725/dvn/ytnej6/b1t5y5
title: 0.Disclaimer.pdf
DOI: 10.34725/dvn/ytnej6/dx87lc
title: 3. WAM_Household_Raw.tab

description: Raw data that was collected in the Western Amazon SL.
DOI: 10.34725/dvn/ytnej6/fv3xmp
title: 7.WAM-indicator-guide_29_Aug.pdf

description: Western Amazon Indicator Guide
DOI: 10.34725/dvn/ytnej6/hrfdsc
title: 0. Disclaimer.pdf

description: Disclaimer for data use.
DOI: 10.34725/dvn/ytnej6/iz1i0x
title: 4.WAM_Household_Ver-STATA-1.tab

description: Stata data file for verified and cleaned household data.
DOI: 10.34725/dvn/ytnej6/jagjiw
title: 0. Disclaimer.pdf

description: Disclaimer for data use.
DOI: 10.34725/dvn/ytnej6/mlqmtw
title: 1. SL-HH INSTRUMENT final 30102013SP-JP.docx

description: This is the household questionnaire that was developed for data collection in the Western Amazon SL.
DOI: 10.34725/dvn/ytnej6/qyjv4g
title: 7.WAM-indicator-guide_29_Aug.pdf

description: Western Amazon Indicator Guide
DOI: 10.25550/tnw
title: microCT - Bone Tissue of Ctgf Control Mouse at P0

description: Mouse ID: CP049 This dataset includes microCT scans of the skull of a Ctgf Control Mouse at P0. The scan is in NiFTI format. See Help section for a list of free applications to view files in NiFTI format