cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.28039505.v1
title: <b>Methionine-driven methylation modification overcomes</b><b> </b><b>plasmid-mediated high-level tigecycline resistance</b>

description: This work highlights the therapeutic potential of Methionine in overcoming plasmid-mediated high-level tigecycline resistance, and provides a new paradigm to enhance antibiotic efficacy by harnessing cellular metabolic networks as well as epigenetic modifications. The uploaded database is the metabolomics data.
DOI: 10.6084/m9.figshare.c.3819286_d13.v1
title: Additional file 8: of Understanding the response to endurance exercise using a systems biology approach: combining blood metabolomics, transcriptomics and miRNomics in horses

description: Differentially expressed miRNAs in 10 animals following endurance exercise (a 160 km endurance competition). (XLSX 65 kb)
DOI: 10.3535/pq4-gaj-gb2
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/52k-qqm-rtx
title: Chitinozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ke9-z6p-fcq
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/0ne-46e-zl5
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/q3b-74r-6e4
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.23065437.v2
title: Geographical, temporal variability and sexual size dimorphism of mandible in cave lion (<i>Panthera spelaea</i>) across Northern Eurasia

description: The mandible size variability including sexual size dimorphism (SSD) of the cave lion (<i>Panthera spelaea</i>) in the Pleistocene of Northern Eurasia time has been studied basing on the univariate and multivariate statistical analyses of 76 specimens from 43 localities. It has been confirmed that SSD in adult <i>P. spelaea</i>, as well as in extant <i>P. leo</i>, is the dominant form of group variability of mandible and, to somewhat lesser extent, of variability of cheek teeth. The lowest degree of SSD has been found in a relatively small Beringian subspecies, <i>P. spelaea vereshchagini</i>. The geographical variability of the cave lion from Western to Eastern Eurasia was not a cline at least in the Late Pleistocene. Our results confirm a decrease in overall mandible size from the Middle Pleistocene to the Late Pleistocene over a large part of the species’ range. We speculate that evolutionary changes in mandible size, lower canines or cheek teeth may have proceeded at different rates, allometry and probable heterochrony. Our results have added a new evidence to support the subspecies status of the Beringian lion (<i>P. spelaea vereshchagini</i>), but they are insufficient for other decisions on cave lion taxonomy at the subspecies level.
DOI: 10.3535/4r1-g4a-tyk
title: †Eoplectodonta Kozlowski, 1929

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5x9-06c-6l1
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.13467805.v1
title: Additional file 3 of Repeatability and reproducibility of the wzi high resolution melting-based clustering analysis for Klebsiella pneumoniae typing

description: Additional file 3: Table S3. Strains melting temperatures. The instrument used for the HRM analysis, the operator who performed the HRM analysis, the primer set used, the melting temperature replicates (T1, T2 and T3) and their average melting temperature (aTm) are reported for each strain.
DOI: 10.6084/m9.figshare.25860475.v1
title: 2017 Ghana Maternal Health Survey Dataset (STATA format)

description: This is the dataset for the 2017 Ghana Maternal Health Survey in STATA format (.dta)
DOI: 10.3535/pt1-vn7-wyx
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/s31-mwx-2vj
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27101146.v1
title: Raw data of carbamazepine (pharmaceutical) freshwater mesocosm study

description: Raw data of freshwater mesocosms exposed to 0.001-100 ug/L carbamazepine.
DOI: 10.6084/m9.figshare.28624304.v1
title: Dataset 1 - <b><i>Spiroacetals and the rise of Campanula specialists: Receptor sensitivity to host-specific floral scents</i></b>

description: <b>Dataset 1:</b> Concatenated alignment dataset and BEAST input file for the reconstruction of phylogenetic relationships among 11 tested bee species including <i>Campanula</i> specialists [<i>Chelostoma campanularum</i> (Megachilidae), <i>Chelostoma rapunculi</i> (Megachilidae) and <i>Hoplitis mitis</i> (Megachilidae)] and bees with other pollen preferences [generalist <i>Andrena bicolor</i> (Andrenidae), generalist <i>Apis mellifera</i> (Apidae), generalist <i>Bombus terrestris</i> (Apidae), <i>Ranunculus</i> specialist <i>Chelostoma florisomne</i> (Megachilidae), Asteraceae specialist <i>Heriades truncorum</i> (Megachilidae), <i>Echium</i> specialist<i> </i><i>Hoplitis adunca</i> (Megachilidae), generalist <i>Osmia bicornis</i> (Megachilidae) and generalist <i>Osmia cornuta</i> (Megachilidae)].
DOI: 10.3535/3jw-prt-abr
title: Chitinozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/ldw-req-4tr
title: Specimen from Tallinn University of Technology

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r18-0nh-af8
title: †Eochonetes Reed, 1917

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.5097286.v1
title: Data References from Hierarchical complexity and the size limits of life

description: References for sizes in Data File
DOI: 10.3535/30t-my2-dmc
title: Chitinozoa

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/gea-rxz-p2q
title: †Leptaena Dalman, 1828

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.26531758.v1
title: Friends with benefits: Exploring donors of United Russia

description: Why do private companies contribute to the ruling party in an authoritarian regime? While part of the motivation may align with democratic logic, involving both ideological and opportunistic strategies of support, non-democratic regimes introduce additional factors into this dynamic. This results in a more direct and widespread manifestation of corruption, particularly in sectors of specific interest to autocrats. This paper delves into the donations made by private companies to United Russia party from 2011 to 2022. Using event study models, it presents evidence suggesting that a one-time contribution to United Russia by major business entities increases the value of contracts awarded to the company, particularly in two economic sectors. In contrast, regular contributions do not have the same significant impact on returns from public procurement contracts, differentiating ideological supporters from opportunistic ones.
DOI: 10.17632/79mm425n5v
title: Dataset for supporting a modular autoinduction device for control of gene expression in Bacillus subtilis

description: Modular and tuneable genetic tools for Metabolic Engineering fuels the development of chassis for the efficient production of biocompounds at industrial scale. We have constructed an autoinduction device for gene expression in Bacillus subtilis based on the LuxR/I quorum sensing system (“A modular autoinduction device for control of gene expression in Bacillus subtilis”, doi: 10.1016/j.ymben.2020.03.012). Here, we present raw and processed data regarding to B. subtilis growth measured as OD600, performed in three different scales: microcultivation on 96-well plates (200 µL), test tube (12 mL), and Erlenmeyer flask (50 mL). We also present raw and processed data on gene expression measured as GFP fluorescence (485/535 nm), luminescence and riboflavin production. Measurements were performed on a microplate reader Tecan 200 PRO (iControl software) and on spectrophotometer (Thermo Fisher Scientific GENESYS 10S UV-Vis). Processed data are presented as product/OD600, maximum and minimum promoter activity, fold of induction, and the induction OD600.
DOI: 10.3535/nde-pqy-mmm
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/vsa-y5b-z1n
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27280263.v1
title: Access to lactation consult services during the COVID-19 pandemic and the impact on breastfeeding outcome variables - Raw data

description: The aim of this study was to determine the prevalence of professional lactation support at a mid-sized academic medical institution in Central Pennsylvania during the COVID-19 pandemic and explore the influence of the pandemic on the equitable accessibility of lactation services. This study aims to identify changes in breastfeeding and access to lactation support across three different phases of the pandemic (early, middle, and late).
DOI: 10.6084/m9.figshare.28189739.v1
title: Yielding behaviour of active particles in bulk and in confinement

description: Data for figures in the manuscript with title 
"Yielding behaviour of active particles in bulk and in confinement"
DOI: 10.6084/m9.figshare.28218789.v1
title: Efficacy and safety of triple hormone receptor agonist retatrutide for the management of obesity: a systematic review and meta-analysis

description: Retatrutide is a novel triple hormone receptor agonist which has shown great promise in tackling obesity in preliminary trials. We did this systematic review and meta-analysis to pool the results of all available trials and ascertain its safety and efficacy in the treatment of obesity. A literature search was conducted in PubMed, Cochrane Central and Embase using appropriate search terms and randomized control trials (RCTs) were identified which reported the safety and efficacy of retatrutide. Data was pooled using mean differences for continuous variables and risk ratios for the safety profile in RStudio. After the initial search four RCTs were included in the analysis which compared the safety and efficacy of retatrutide versus placebo. Retatrutide showed a dose dependent relationship with the 12 mg dose causing the maximum reductions across all the outcomes considered. The safety profile of retatrutide was found to be comparable to the control group. In conclusion our analysis found retatrutide to be clinically and statistically better than placebo in the various studies outcomes. We eagerly await the conduction of further trials for more robust and substantial results. www.crd.york.ac.uk/prospero identifier is CRD42024566153.
DOI: 10.3535/2by-8nn-del
title: Favosites sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/z5f-qmf-kxt
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.22700062.v3
title: Ocelli Tutorial 3: Human bone marrow (ATAC-seq + Protein Epitopes)

description: Data for Tutorial 3 of Ocelli, available at https://ocelli.readthedocs.io. Includes processed data from the Gene Expression Omnibus under accession number GSE156478 [1]. [1] Mimitou EP, Lareau CA, Chen KY, Zorzetto-Fernandes AL et al. Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells. <em>Nat Biotechnol</em> 2021 Oct;39(10):1246-1258.
DOI: 10.6084/m9.figshare.28189739
title: Yielding behaviour of active particles in bulk and in confinement

description: Data for figures in the manuscript with title 
"Yielding behaviour of active particles in bulk and in confinement"
DOI: 10.25573/data.10042718.v29
title: San Lorenzo Crane_Wind direction

description: San Lorenzo (Formerly know as Fort Sherman) Canopy Access Crane. <br><br>Interval mean wind vector<br><br>Established in 1997, the San Lorenzo canopy crane (9.281031°, -79.974518°) is located approximately 11 km South West from the city of Colon, in the middle the Parque Natural San Lorenzo (formerly known as Fort Sherman) and is surrounded by 300-year old, low-land tropical rainforest
DOI: 10.3535/0g8-563-lql
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/j0c-mph-kss
title: Porifera Grant, 1836

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.17632/t8bscbsv5d
title: Stochastic Hill Climbing for damage detection

description: The dataset ,,Stochastic hill cliimbing _severity" consists of the deflection under its own weight values for a cantilever beam of dimensions 1x0.05x0.005 m both in an undamaged state and affected by different transverse cracks.
The dataset ,,Severities obtained with the SHC algorithm" are the severity of  different transverse cracks (open and closed) determined at the fixed end by using the SHC method described in the paper ,,Determining the severity of open and closed cracks using the strain energy loss and the hill-climbing method".
The dataset ,,Training data for damage detection_RFS" is generated by using the severities calculated eith the SHC method and the procedure described in paper ,,Determining the severity of open and closed cracks using the strain energy loss and the hill-climbing method" and can be used to train an ANN for detecting, locating and evaluating transverse cracks of different depth and width present in cantilever beams.
The datasets ,,FEM RFS values for testing damage detection ANN" and "Experimental testing values" are RFS values calculated for the obtained natural frequencies of the same cantilever beam affected by different transverse cracks in known locations. The frequency values are determined using FEM and also from real measurements in the laboratory.
DOI: 10.3535/pjl-vk6-7th
title: Favosites pseudoforbesi ohesaarensi, Klaamann, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/r8a-zll-tk2
title: Favosites sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.21936381.v1
title: PETROSARD POPs

description: data from Int. J. Environ. Res. Public Health 2023, 20, 2036. https://doi.org/10.3390/ijerph20032036 <br> <strong>Abstract: </strong>Organochloride (OC) and polychlorinated biphenyl (PCB) concentrations were determined in the muscle tissue of fifty sardine samples (Sardinella brasiliensis) sampled off the south-east Brazilian shelf. The aim herein was to investigate OCs and PCBs composition profile, bioaccumulation potential and human risks. The concentrations of 18 organochlorine pesticides (OCPs) were below the method limit of quantification in most samples (ca. 94%), with few detected, namely δ-HCH, γ-HCH, Endosulfan I and II, Endosulfan Sulphate, DDE, Dieldrin, Endrin, Endrin Aldeide, Endrin Cetone and Metoxyclor. The median concentration for the Σ41 PCBs was 2.32 ng g<sup>-1</sup>, ranging from values below the limit of quantification (-1. Based on the analyzed samples, the concentrations reported herein do not represent a risk for human consumption according to both national and international guidelines, nor do OC and PCB bioaccumulation in sardines appear to be a concern at the moment. These findings, although preliminary, represent a baseline for future comparisons of the quality of an important source of protein available to the poorest Brazilian population strata
DOI: 10.6084/m9.figshare.23805069.v2
title: Combined cereals and climate variety trials data

description: To be updated
DOI: 10.6084/m9.figshare.25242676.v5
title: Data depository_CO2_Yeoetal

description: Data repository for: Yeo, J.ZQ., Rosentreter, J.A., Oakes, J.M. <i>et al.</i> High carbon dioxide emissions from Australian estuaries driven by geomorphology and climate. <i>Nat Commun</i> <b>15</b>, 3967 (2024). https://doi.org/10.1038/s41467-024-48178-4
DOI: 10.3535/kvt-6vw-y4v
title: Favosites pseudoforbesi ohesaarensi, Klaamann, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/nfx-h0d-zxe
title: Favosites pseudoforbesi ohesaarensi, Klaamann, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/03f-pxm-hnb
title: †Parastrophina Schuchert & LeVene, 1929

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/89d-68k-wn1
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/5xc-p4k-tbm
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/916-4lw-t3b
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/taa-4sn-4vp
title: Favosites pseudoforbesi ohesaarensi, Klaamann, 1962

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/zce-9wz-4yg
title: Favosites sp.

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/4g4-hsr-1yx
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.3535/els-vv3-4pe
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.25139234.v1
title: Female mountain gorillas form enduring relationships

description: Strong, affiliative relationships are important across social mammals, and in many species, relationships between female kin form the basis of group life. Relationships are expected to be weaker in cases where females disperse or do not cooperatively defend resources. Mountain gorillas (<i>Gorilla beringei beringei</i>) seem to support this, as females can emigrate multiple times throughout their life and do not jointly defend the abundant vegetation they feed on. Unsurprisingly, mountain gorillas form variable or weak relationships with other females and seemingly prioritize relationships with adult males. But prior studies may have misinterpreted relationships due to a focus on grooming and due to understandable limitations of small sample sizes and short study periods. Here, we examine proximity and grooming between 47 adult female mountain gorillas in five groups over 5 to 13 years. We analyze 2m, 5m, and grooming relationships between 366 individual dyads to determine (1) if proximity relationships are preferential, and (2) if they endure across time. Most females formed at least one preferential 2m and 5m proximity relationship (43 of 47), which both lasted a mean of 2.1 years. Additionally, 3.6% of dyads (n=13/366) formed enduring 2m proximity preferences that exceeded four years with the longest lasting at least 12 years. Maternal kin had the most enduring proximity and grooming relationships, although grooming was rare overall. The enduring proximity relationships between some female gorillas in our sample are similar in length to those of female baboons and male chimpanzees, which are considered social bonds. Mountain gorillas provide a system in which factors influencing bonds can be better understood, and our study highlights a need to refine definitions of social bonds while potentially reassessing their evolutionary function.
DOI: 10.6084/m9.figshare.28280003
title: On-chip real-time detection of optical frequency variations with ultrahigh resolution using the sine-cosine encoder approach

description: Data from Figures 3 to 7 in the paper and Figures 1 to 4 in the supplementary information.
DOI: 10.6084/m9.figshare.28280003.v1
title: On-chip real-time detection of optical frequency variations with ultrahigh resolution using the sine-cosine encoder approach

description: Data from Figures 3 to 7 in the paper and Figures 1 to 4 in the supplementary information.
DOI: 10.6084/m9.figshare.28622147.v1
title: U1.csv

description: Decoherence-protected holonomic gates with reduced requirements for physical resources
DOI: 10.3535/wqn-zp5-76s
title: Brachiopoda Duméril, 1805

description: Digital Specimen for the physical specimen hosted at Tallinn University of Technology.
DOI: 10.6084/m9.figshare.27957519.v1
title: Data-Cybervictimization, TEI & Suicide

description: Cybervictimization has been linked to various forms of psychological maladjustment, including depression and suicide. Researchers have examined whether emotional intelligence (EI) may attenuate the impact of cybervictimization upon depressive symptoms and suicidal thoughts and behavior. Many research studies regarding the possible buffering effect of EI have involved ability EI (AEI), which is a grouping of mental abilities in emotional functioning (e.g., emotion perception), in contrast to trait emotional intelligence (TEI) in which EI is characterized as a cluster of emotional competencies and qualities, and is referred to by some as a personality trait referred to as emotional self-efficacy. The purpose of the study is to determine whether TEI has a buffering effect on depression and suicidal ideation for US college students who have experienced cybervictimization. Within the sample of 891 college students (76% female; 89.8% Caucasian), cybervictimization explained a meaningful amount of variance in predicting suicide, whereas depression and TEI did account for much of the variance in their relationship with suicidal ideation. The results suggest that TEI may not be worthy of intervention and prevention for programs that seek to reduce suicidal ideation among college students.