cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12922698.v1
title: Additional file 3 of DeepGraphMolGen, a multi-objective, computational strategy for generating molecules with desirable properties: a graph convolution and reinforcement learning approach

description: Additional file 3. Molecules generated by Experiment 3 having QED &gt; 0.8 and SA score &gt; 0.8.
DOI: 10.6084/m9.figshare.12922701.v1
title: Additional file 4 of DeepGraphMolGen, a multi-objective, computational strategy for generating molecules with desirable properties: a graph convolution and reinforcement learning approach

description: Additional file 4. Molecules generated by Experiment 4 having QED &gt; 0.8 and SA score &gt; 0.8.
DOI: 10.6084/m9.figshare.12922702.v1
title: Additional file 3 of Gel-based proteomic map of Arabidopsis thaliana root plastids and mitochondria

description: Additional file 3: Table S1. Proteins identified in root plastid enriched fraction by LC-MS/MS. Protein identification was performed using Proteome Discoverer 2.2 software as described in Methods.
DOI: 10.6084/m9.figshare.12922704
title: Additional file 5 of DeepGraphMolGen, a multi-objective, computational strategy for generating molecules with desirable properties: a graph convolution and reinforcement learning approach

description: Additional file 5. Molecules generated by Experiment 5 having QED &gt; 0.8 and SA score &gt; 0.8.
DOI: 10.6084/m9.figshare.12922704.v1
title: Additional file 5 of DeepGraphMolGen, a multi-objective, computational strategy for generating molecules with desirable properties: a graph convolution and reinforcement learning approach

description: Additional file 5. Molecules generated by Experiment 5 having QED &gt; 0.8 and SA score &gt; 0.8.
DOI: 10.6084/m9.figshare.12922752.v1
title: Additional file 2 of Performance of a real-time PCR approach for diagnosing Schistosoma haematobium infections of different intensity in urine samples from Zanzibar

description: Additional file 2: Table S2. showing the characteristics of 27 urine samples that had S. haematobium egg counts in the urine filtration (UF) microscopy or microhaematuria-positive reagent strip results, but were negative for Dra1 DNA in the qPCR.
DOI: 10.6084/m9.figshare.12922749
title: Additional file 1 of Performance of a real-time PCR approach for diagnosing Schistosoma haematobium infections of different intensity in urine samples from Zanzibar

description: Additional file 1: Table S1. showing the multivariate frequency distribution of S. haematobium infection measured by urine filtration (egg counts), reagent strips (microhaematuria), and qPCR (Dra1 DNA).
DOI: 10.6084/m9.figshare.12922752
title: Additional file 2 of Performance of a real-time PCR approach for diagnosing Schistosoma haematobium infections of different intensity in urine samples from Zanzibar

description: Additional file 2: Table S2. showing the characteristics of 27 urine samples that had S. haematobium egg counts in the urine filtration (UF) microscopy or microhaematuria-positive reagent strip results, but were negative for Dra1 DNA in the qPCR.
DOI: 10.6084/m9.figshare.12922749.v1
title: Additional file 1 of Performance of a real-time PCR approach for diagnosing Schistosoma haematobium infections of different intensity in urine samples from Zanzibar

description: Additional file 1: Table S1. showing the multivariate frequency distribution of S. haematobium infection measured by urine filtration (egg counts), reagent strips (microhaematuria), and qPCR (Dra1 DNA).
DOI: 10.6084/m9.figshare.12922798.v1
title: Additional file 1 of Evaluation of an intervention aimed at supporting new parents: the Baby Newsletter project

description: Additional file 1.
DOI: 10.6084/m9.figshare.12858641
title: Additional file 1 of Clustering analysis of tumor metabolic networks

description: Additional file 1 List of recurrent metabolites removed from the network. The file AdditionalFile1.xlsx contains a list of all the recurrent metabolites which were removed during network construction.
DOI: 10.6084/m9.figshare.12922798
title: Additional file 1 of Evaluation of an intervention aimed at supporting new parents: the Baby Newsletter project

description: Additional file 1.
DOI: 10.6084/m9.figshare.12858653
title: Additional file 4 of Clustering analysis of tumor metabolic networks

description: Additional file 4 KEGG term enrichment from the 50 clusters of the Kidney metabolic network. The file AdditionalFile4.xlsx provides the list of KEGG terms enriched from the enzymes belonging to the different clusters in the kidney metabolic network.
DOI: 10.6084/m9.figshare.12858644
title: Additional file 2 of Clustering analysis of tumor metabolic networks

description: Additional file 2 Connected components size. The file AdditionalFile2.xlsx provides tables showing number of connected components and relative nodes from the four datasets networks.
DOI: 10.6084/m9.figshare.12858644.v1
title: Additional file 2 of Clustering analysis of tumor metabolic networks

description: Additional file 2 Connected components size. The file AdditionalFile2.xlsx provides tables showing number of connected components and relative nodes from the four datasets networks.
DOI: 10.6084/m9.figshare.12858653.v1
title: Additional file 4 of Clustering analysis of tumor metabolic networks

description: Additional file 4 KEGG term enrichment from the 50 clusters of the Kidney metabolic network. The file AdditionalFile4.xlsx provides the list of KEGG terms enriched from the enzymes belonging to the different clusters in the kidney metabolic network.
DOI: 10.6084/m9.figshare.12922801.v1
title: Additional file 2 of Evaluation of an intervention aimed at supporting new parents: the Baby Newsletter project

description: Additional file 2.
DOI: 10.6084/m9.figshare.12858662
title: Additional file 6 of Clustering analysis of tumor metabolic networks

description: Additional file 6 Matlab scripts for clustering evaluation. The file AdditionalFile6.zip provides a (zipped) set of Matlab scripts, used for clustering evaluation.
DOI: 10.6084/m9.figshare.12922801
title: Additional file 2 of Evaluation of an intervention aimed at supporting new parents: the Baby Newsletter project

description: Additional file 2.
DOI: 10.6084/m9.figshare.12922840.v1
title: Additional file 1 of Signatures of selection reveal candidate genes involved in economic traits and cold acclimation in five Swedish cattle breeds

description: Additional file 1: Table S1. List of genomic regions under putative selection (q-value &lt; 0.05) identified using the DCMS (De-correlated composite of multiple signals) method for each breed. The first column represents the abbreviated name for each breed, and the second column shows the number (ID) of each genomic region identified as under putative selection within each breed.
DOI: 10.6084/m9.figshare.12922843.v1
title: Additional file 2 of Signatures of selection reveal candidate genes involved in economic traits and cold acclimation in five Swedish cattle breeds

description: Additional file 2: Table S2. Full list of protein coding genes identified (using UMD3.1 genome assembly) from the genomic regions under putative selection. The 1st column represents the abbreviated name for each breed, and the 6th column represents the number (ID) of significant genomic region under putative selection (within each breed) and the rank of each gene within that region (i.e. the value 1 represents the closest gene to the most significant SNP within each region).
DOI: 10.6084/m9.figshare.12922840
title: Additional file 1 of Signatures of selection reveal candidate genes involved in economic traits and cold acclimation in five Swedish cattle breeds

description: Additional file 1: Table S1. List of genomic regions under putative selection (q-value &lt; 0.05) identified using the DCMS (De-correlated composite of multiple signals) method for each breed. The first column represents the abbreviated name for each breed, and the second column shows the number (ID) of each genomic region identified as under putative selection within each breed.
DOI: 10.6084/m9.figshare.12922843
title: Additional file 2 of Signatures of selection reveal candidate genes involved in economic traits and cold acclimation in five Swedish cattle breeds

description: Additional file 2: Table S2. Full list of protein coding genes identified (using UMD3.1 genome assembly) from the genomic regions under putative selection. The 1st column represents the abbreviated name for each breed, and the 6th column represents the number (ID) of significant genomic region under putative selection (within each breed) and the rank of each gene within that region (i.e. the value 1 represents the closest gene to the most significant SNP within each region).
DOI: 10.6084/m9.figshare.12922846
title: Additional file 3 of Signatures of selection reveal candidate genes involved in economic traits and cold acclimation in five Swedish cattle breeds

description: Additional file 3: Table S3. Mutual genes identified among breeds.
DOI: 10.6084/m9.figshare.12922846.v1
title: Additional file 3 of Signatures of selection reveal candidate genes involved in economic traits and cold acclimation in five Swedish cattle breeds

description: Additional file 3: Table S3. Mutual genes identified among breeds.
DOI: 10.6084/m9.figshare.12922849.v1
title: Additional file 1 of Trends in adolescent first births in sub-Saharan Africa: a tale of increasing inequity?

description: Additional file 1. Sample size for all surveys: women aged 20–24 years.
DOI: 10.6084/m9.figshare.12922849
title: Additional file 1 of Trends in adolescent first births in sub-Saharan Africa: a tale of increasing inequity?

description: Additional file 1. Sample size for all surveys: women aged 20–24 years.
DOI: 10.6084/m9.figshare.12922855.v1
title: Additional file 3 of Trends in adolescent first births in sub-Saharan Africa: a tale of increasing inequity?

description: Additional file 3. Confidence intervals of proportion of women experiencing a first birth
DOI: 10.6084/m9.figshare.12922852.v1
title: Additional file 2 of Trends in adolescent first births in sub-Saharan Africa: a tale of increasing inequity?

description: Additional file 2. Confidence intervals of proportion of women experiencing a first birth
DOI: 10.6084/m9.figshare.12922852
title: Additional file 2 of Trends in adolescent first births in sub-Saharan Africa: a tale of increasing inequity?

description: Additional file 2. Confidence intervals of proportion of women experiencing a first birth
DOI: 10.6084/m9.figshare.12922860.v1
title: Additional file 2 of De novo transcriptome sequencing of Rhododendron molle and identification of genes involved in the biosynthesis of secondary metabolites

description: Additional file 2: Table S2. TPS and CYP sequences derived from GenBank used for building custom databases.
DOI: 10.6084/m9.figshare.12922855
title: Additional file 3 of Trends in adolescent first births in sub-Saharan Africa: a tale of increasing inequity?

description: Additional file 3. Confidence intervals of proportion of women experiencing a first birth
DOI: 10.6084/m9.figshare.12922857
title: Additional file 1 of De novo transcriptome sequencing of Rhododendron molle and identification of genes involved in the biosynthesis of secondary metabolites

description: Additional file 1: Table S1. Accession numbers of protein sequences derived from GenBank and swissprot used for the phylogenetic analysis.
DOI: 10.6084/m9.figshare.12922863
title: Additional file 3 of De novo transcriptome sequencing of Rhododendron molle and identification of genes involved in the biosynthesis of secondary metabolites

description: Additional file 3: Table S3. Primers used for qPCR.
DOI: 10.6084/m9.figshare.12922860
title: Additional file 2 of De novo transcriptome sequencing of Rhododendron molle and identification of genes involved in the biosynthesis of secondary metabolites

description: Additional file 2: Table S2. TPS and CYP sequences derived from GenBank used for building custom databases.
DOI: 10.6084/m9.figshare.12922863.v1
title: Additional file 3 of De novo transcriptome sequencing of Rhododendron molle and identification of genes involved in the biosynthesis of secondary metabolites

description: Additional file 3: Table S3. Primers used for qPCR.
DOI: 10.6084/m9.figshare.12922878
title: Additional file 7 of De novo transcriptome sequencing of Rhododendron molle and identification of genes involved in the biosynthesis of secondary metabolites

description: Additional file 7: Table S5. RNA-Seq data of identified TPS and CYP candidates in R. molle.
DOI: 10.6084/m9.figshare.9805394
title: Predicting the Emergence of Community Smells using Socio-Technical Metrics

description: Online appendix of the paper titled: "Predicting the Emergence of Community Smells using Socio-Technical Metrics"
DOI: 10.6084/m9.figshare.12922857.v1
title: Additional file 1 of De novo transcriptome sequencing of Rhododendron molle and identification of genes involved in the biosynthesis of secondary metabolites

description: Additional file 1: Table S1. Accession numbers of protein sequences derived from GenBank and swissprot used for the phylogenetic analysis.
DOI: 10.6084/m9.figshare.12922875
title: Additional file 6 of De novo transcriptome sequencing of Rhododendron molle and identification of genes involved in the biosynthesis of secondary metabolites

description: Additional file 6: Table S4. DEGs involved in biosynthetic pathways of secondary metabolites.
DOI: 10.6084/m9.figshare.12922875.v1
title: Additional file 6 of De novo transcriptome sequencing of Rhododendron molle and identification of genes involved in the biosynthesis of secondary metabolites

description: Additional file 6: Table S4. DEGs involved in biosynthetic pathways of secondary metabolites.
DOI: 10.6084/m9.figshare.9805394.v2
title: Predicting the Emergence of Community Smells using Socio-Technical Metrics

description: Online appendix of the paper titled: "Predicting the Emergence of Community Smells using Socio-Technical Metrics"
DOI: 10.6084/m9.figshare.12922878.v1
title: Additional file 7 of De novo transcriptome sequencing of Rhododendron molle and identification of genes involved in the biosynthesis of secondary metabolites

description: Additional file 7: Table S5. RNA-Seq data of identified TPS and CYP candidates in R. molle.
DOI: 10.6084/m9.figshare.12922917
title: Additional file 1 of Association of relapse-linked ARID5B single nucleotide polymorphisms with drug resistance in B-cell precursor acute lymphoblastic leukemia cell lines

description: Additional file 1: Table S1. Karyotype, age, patient status at the cell establishment, and SNP genotypes and gene expression level of ARID5B in cell lines.
DOI: 10.6084/m9.figshare.12922917.v1
title: Additional file 1 of Association of relapse-linked ARID5B single nucleotide polymorphisms with drug resistance in B-cell precursor acute lymphoblastic leukemia cell lines

description: Additional file 1: Table S1. Karyotype, age, patient status at the cell establishment, and SNP genotypes and gene expression level of ARID5B in cell lines.
DOI: 10.6084/m9.figshare.12922920
title: Additional file 2 of Association of relapse-linked ARID5B single nucleotide polymorphisms with drug resistance in B-cell precursor acute lymphoblastic leukemia cell lines

description: Additional file 2: Table S2. IC50 of each drug in cell lines.
DOI: 10.6084/m9.figshare.12922920.v1
title: Additional file 2 of Association of relapse-linked ARID5B single nucleotide polymorphisms with drug resistance in B-cell precursor acute lymphoblastic leukemia cell lines

description: Additional file 2: Table S2. IC50 of each drug in cell lines.
DOI: 10.6084/m9.figshare.12922924
title: Additional file 11 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 11 : Table S8 Functional analyses of differentially expressed genes.
DOI: 10.6084/m9.figshare.12922936
title: Additional file 15 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 15 : Table S12. Accession numbers corresponding to all transcripts (sequences) reported in this work.
DOI: 10.6084/m9.figshare.12922924.v1
title: Additional file 11 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 11 : Table S8 Functional analyses of differentially expressed genes.
DOI: 10.6084/m9.figshare.12922951
title: Additional file 5 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 5 : Table S4 Principal component analysis output for comparisons between average transcriptional expression amongst time points as well as for individual replicates.
DOI: 10.6084/m9.figshare.12922933
title: Additional file 14 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 14 : Table S11 Transcriptional and bioinformatics description of the Lu. longipalpis midgut transcripts.
DOI: 10.6084/m9.figshare.12922933.v1
title: Additional file 14 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 14 : Table S11 Transcriptional and bioinformatics description of the Lu. longipalpis midgut transcripts.
DOI: 10.6084/m9.figshare.12922948.v1
title: Additional file 4 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 4 : Table S3 Annotation of transcripts participating in biological processes related to immunity, digestion, and peritrophic matrix/chitin metabolism.
DOI: 10.6084/m9.figshare.12922927.v1
title: Additional file 12 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 12 : Table S9 Gene Ontology (GO) enrichment for the up-regulated genes at each time point.
DOI: 10.6084/m9.figshare.12922930
title: Additional file 13 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 13 : Table S10 Gene Ontology (GO) enrichment for the down-regulated genes at each time point.
DOI: 10.6084/m9.figshare.12922930.v1
title: Additional file 13 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 13 : Table S10 Gene Ontology (GO) enrichment for the down-regulated genes at each time point.
DOI: 10.6084/m9.figshare.12922927
title: Additional file 12 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 12 : Table S9 Gene Ontology (GO) enrichment for the up-regulated genes at each time point.
DOI: 10.6084/m9.figshare.12922936.v1
title: Additional file 15 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 15 : Table S12. Accession numbers corresponding to all transcripts (sequences) reported in this work.
DOI: 10.6084/m9.figshare.12922945.v1
title: Additional file 3 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 3 : Table S2 Summary of the overall percentage of contigs (% of contigs) or abundance (%TPM) for all time points. The distribution of the mapped reads to the functional classification are highlighted.
DOI: 10.6084/m9.figshare.12922939.v1
title: Additional file 1 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 1 : Table S1 Summary of the Lu. longipalpis midgut transcripts.
DOI: 10.6084/m9.figshare.12922945
title: Additional file 3 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 3 : Table S2 Summary of the overall percentage of contigs (% of contigs) or abundance (%TPM) for all time points. The distribution of the mapped reads to the functional classification are highlighted.
DOI: 10.6084/m9.figshare.12922957.v1
title: Additional file 7 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 7 : Table S5 nCounter probes, counts, and expression comparisons with RNA-Seq TPMs.
DOI: 10.6084/m9.figshare.12922939
title: Additional file 1 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 1 : Table S1 Summary of the Lu. longipalpis midgut transcripts.
DOI: 10.6084/m9.figshare.12922951.v1
title: Additional file 5 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 5 : Table S4 Principal component analysis output for comparisons between average transcriptional expression amongst time points as well as for individual replicates.
DOI: 10.6084/m9.figshare.12922957
title: Additional file 7 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 7 : Table S5 nCounter probes, counts, and expression comparisons with RNA-Seq TPMs.
DOI: 10.6084/m9.figshare.12922960
title: Additional file 8 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 8 : Table S6 Gene sets displaying differential gene expression at each time point.
DOI: 10.6084/m9.figshare.12922960.v1
title: Additional file 8 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 8 : Table S6 Gene sets displaying differential gene expression at each time point.
DOI: 10.6084/m9.figshare.12922963
title: Additional file 9 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 9 : Table S7 Genes uniquely differentially expressed at each time point.
DOI: 10.6084/m9.figshare.12922963.v1
title: Additional file 9 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 9 : Table S7 Genes uniquely differentially expressed at each time point.
DOI: 10.6084/m9.figshare.12922948
title: Additional file 4 of Leishmania infection induces a limited differential gene expression in the sand fly midgut

description: Additional file 4 : Table S3 Annotation of transcripts participating in biological processes related to immunity, digestion, and peritrophic matrix/chitin metabolism.
DOI: 10.6084/m9.figshare.12923032.v1
title: Additional file 2 of Copy number variant hotspots in Han Taiwanese population induced pluripotent stem cell lines - lessons from establishing the Taiwan human disease iPSC Consortium Bank

description: Additional file 2. Table S1. Primer list for RT-PCR. Table S2. A List of Available Normal and Disease iPSCs in the Taiwan Disease iPSC Service Consortium Cell Bank. Table S3. The number of SNV, DEL, INS and MNV of iPSC-specific qualified variants among iPSCs identified by GATK HaplotypeCaller. Table S4. List of iPSC-specific CNV loci. Table S5. Summary of iPSC-specific CNV loci among various iPSC lines. Table S6. List of genes at the “polymorphic” CNV regions strongly associated with the reprogramming process
DOI: 10.6084/m9.figshare.12858932.v1
title: Additional file 1 of ELIXIR-IT HPC@CINECA: high performance computing resources for the bioinformatics community

description: Additional file 1 Table S1: list of the bioinformatics software available for HPC@CINECA users on the three computational platforms (PICO, MARCONI and GALILEO) updated to May 2019. The software portfolio reflects the needs of the users since 2016 and is gradually enriched to meet the requirements of newly approved projects.