cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.3743499
title: A Database of Geometric Albedo Spectra for Rocky Exoplanets

description: Here we present a database of albedo spectra for rocky, Earth-sized and Earth-mass exoplanets, as computed with the NASA Planetary Spectrum Generator tool (psg.gsfc.nasa.gov; Villanueva et al. 2018). The database is presented in two Python .pickle files containing pandas DataFrame objects. The DataFrame index values are wavelength, in micrometers; while the column name values contain the encoded parameters represented in the model object's albedo spectra contained with in that column. Each cell then gives the calculated geometric albedo value for the column-named model planet at the row-indicated wavelength. Two files are presented. One contains models with clouds; one contains models without clouds. To decode the column names, using a Python string.format function. For cloudy models, the format is: <pre><code class="language-python">ColName='{}{}H2{}_R1.0g9.8P{}A{}r10l{}ct{}f0.1'.format(Cdom,Cmix,H2mix,P0,As,Mcld,Ctop)</code></pre> For cloud-free models, the final two parameters are not used. Thus, the correct format is: <pre><code class="language-python">ColName='{}{}H2{}_R1.0g9.8P{}A{}'.format(Cdom,Cmix,H2mix,P0,As)</code></pre> Here, the parameters are as follows: <strong>Cdom</strong>: The name of the dominant absorbing chemical in the atmosphere. Accepted values are H2O, CH4, CO2, SO2, and O2. <strong>Cmix</strong>: The log<sub>10</sub> of the mixing value of the dominant chemical in the atmosphere. Accepted values are [-7.0,-6.0,-5.0,-4.0,-3.0,-2.0,-1.0,-0.01]. <strong>H2mix</strong>: The mixing ratio of molecular hydrogen in the (otherwise) N2 background gas. Expressed as H2/(H2+N2). Accepted values are [0.0,0.02,0.05,0.15,0.5]. <strong>P0</strong>: The surface pressure of the planet, in log<sub>10</sub>(bars). Accepted values are [-1.0,-0.5,0.0,0.5,1.0,1.5,2.0] <strong>As</strong>: The grey, geometric albedo value of the surface of the planet. Accepted values are [0.05,0.2,0.35,0.5] <strong>Mcld</strong>: The linear cloud mass of cloud matter in the atmosphere, in log<sub>10</sub>(kg/m^2). Accepted values are [-3.0,-2.5,-2.0,-1.5,-1.0]. <strong>Ctop</strong>: The pressure at the top layer of the clouds. Acceptable values are [-2.0,-1.5,-1.0,-0.5,0.0,0.5,1.0]. Note that Ctop&lt;P0 for all models. Thus, an atmosphere with a pure N2 background gas and a 0.3% H<sub>2</sub>O mixing ratio, with 1 bar of surface pressure, 0.05 surface albedo, and 1 gram of cloud matter topping at 0.316 bars altitude would be named: <strong>H2O-3.0</strong>H2<strong>0.0</strong>_R1.0g9.8P<strong>0.0</strong>A<strong>0.05</strong>r10l<strong>-3.0</strong>ct<strong>-0.5</strong>f0.1 The database is described in Smith et al. (in review).
DOI: 10.6084/m9.figshare.4522532
title: Long-term deterioration after one stage unicompartmental knee arthroplasty and anterior cruciate ligament reconstruction

description: Treatment for unicompartmental knee osteoarthritis (OA) is controversial in young patients with concomitant anterior cruciate ligament (ACL) deficiency. The aim of the current study is to report long-term results after the combination of unicompartmental knee arthroplasty (UKA) and ACL reconstruction. <br> Retrospective study of one-stage medial UKA and ACL reconstruction performed on 8 patients at a mean age of 52 years (42 to 60). Clinical and radiological results were assessed and analyzed after a mean follow-up of 14.6 years.<br> Patients were satisfied and mean personal satisfaction rate was 8.8 (4 to 10). At the last follow-up, mean WOMAC score was 26 (1 to 52) and mean global KSS was 154 (102 to 200). One revision surgery to total knee arthroplasty was performed 9 years after the combined procedure due to aseptic loosening. One more case of clinical deterioration was observed 13 years after index surgery.<br> Combined UKA and ACL reconstruction can be a therapeutic option for young and active patients with concomitant knee instability and unicompartmental OA. The procedure is highly demanding and reliable only in hands of experienced surgeons. Over all, satisfactory outcome can be achieved at a minimum follow-up of 10 years. However, clinical deterioration can be observed in the long-term.<br>
DOI: 10.6084/m9.figshare.4522532.v1
title: Database.xlsx

description: Treatment for unicompartmental knee osteoarthritis is controversial in young patients with concomitant anterior cruciate ligament (ACL) deficiency. The aim of the current study is to report long-term results after the combination of unicompartmental knee arthroplasty (UKA) and ACL reconstruction. Retrospective study of one-stage medial UKA and ACL reconstruction performed on 8 patients at a mean age of 52 years (42 to 60). Clinical and radiological results were assessed and analyzed after a mean follow-up of 14.6 years. A control cohort of 8 patients with intact ACL, treated by UKA in isolation, was selected for a comparative study. Patients were very satisfied and mean personal satisfaction rate was 8.8 (4 to 10). At the last follow-up, mean WOMAC score was 26 (1 to 52) and mean global KSS was 154 (102 to 200). No statistically significant differences were found between groups. One revision surgery to total knee arthroplasty was performed 9 years after the combined procedure due to aseptic loosening. One more case of clinical deterioration was observed.<br>Satisfactory mid-term results are achieved with the combined UKA and ACL reconstruction, which represents a good alternative to preserve bone stock and functional level of the knee in young patients. However, clinical deterioration can be observed in the long-term follow-up.
DOI: 10.6084/m9.figshare.4520117
title: BEHAVBUGS barcode metadata

description: Barcode metadata file (one barcode per individual fecal sample) corresponding to "BEHAVBUGS_NoIndex_L001_R1_001.fastq" and "BEHAVBUGS_NoIndex_L001_R2_001.fastq" 16S rRNA gene sequence data. Barcodes are 12 nucleotides long with an additional A.<br>
DOI: 10.6084/m9.figshare.4522532.v3
title: Long-term deterioration after one stage unicompartmental knee arthroplasty and anterior cruciate ligament reconstruction

description: Treatment for unicompartmental knee osteoarthritis (OA) is controversial in young patients with concomitant anterior cruciate ligament (ACL) deficiency. The aim of the current study is to report long-term results after the combination of unicompartmental knee arthroplasty (UKA) and ACL reconstruction. <br> Retrospective study of one-stage medial UKA and ACL reconstruction performed on 8 patients at a mean age of 52 years (42 to 60). Clinical and radiological results were assessed and analyzed after a mean follow-up of 14.6 years.<br> Patients were satisfied and mean personal satisfaction rate was 8.8 (4 to 10). At the last follow-up, mean WOMAC score was 26 (1 to 52) and mean global KSS was 154 (102 to 200). One revision surgery to total knee arthroplasty was performed 9 years after the combined procedure due to aseptic loosening. One more case of clinical deterioration was observed 13 years after index surgery.<br> Combined UKA and ACL reconstruction can be a therapeutic option for young and active patients with concomitant knee instability and unicompartmental OA. The procedure is highly demanding and reliable only in hands of experienced surgeons. Over all, satisfactory outcome can be achieved at a minimum follow-up of 10 years. However, clinical deterioration can be observed in the long-term.<br>
DOI: 10.6084/m9.figshare.4520117.v1
title: BEHAVBUGS barcode metadata

description: Barcode metadata file (one barcode per individual fecal sample) corresponding to "BEHAVBUGS_NoIndex_L001_R1_001.fastq" and "BEHAVBUGS_NoIndex_L001_R2_001.fastq" 16S rRNA gene sequence data. Barcodes are 12 nucleotides long with an additional A.<br>
DOI: 10.6084/m9.figshare.4522532.v2
title: One stage unicompartmental knee arthroplasty and anterior cruciate ligament reconstruction after a minimum follow-up of 10 years

description: Treatment for unicompartmental knee osteoarthritis is controversial in young patients with concomitant anterior cruciate ligament (ACL) deficiency. The aim of the current study is to report long-term results after the combination of unicompartmental knee arthroplasty (UKA) and ACL reconstruction. Retrospective study of one-stage medial UKA and ACL reconstruction performed on 8 patients at a mean age of 52 years (42 to 60). Clinical and radiological results were assessed and analyzed after a mean follow-up of 14.6 years. A control cohort of 8 patients with intact ACL, treated by UKA in isolation, was selected for a comparative study. Patients were very satisfied and mean personal satisfaction rate was 8.8 (4 to 10). At the last follow-up, mean WOMAC score was 26 (1 to 52) and mean global KSS was 154 (102 to 200). No statistically significant differences were found between groups. One revision surgery to total knee arthroplasty was performed 9 years after the combined procedure due to aseptic loosening. One more case of clinical deterioration was observed.<br>Satisfactory mid-term results are achieved with the combined UKA and ACL reconstruction, which represents a good alternative to preserve bone stock and functional level of the knee in young patients. However, clinical deterioration can be observed in the long-term follow-up.
DOI: 10.6084/m9.figshare.4519961
title: Gut-Brain Axis in Healthy Females

description: Raw, multiplexed 16S rRNA gene sequences (Illumina MiSeq 2x250 forward ("R1") and 12-nucleotide index ("R2")) derived from healthy human female fecal samples, and accompanying barcode metadata file.<br>
DOI: 10.6084/m9.figshare.4520006.v1
title: Figures - voltage membrane traces for 1D Purkinje-ventricle model

description: Figures - voltage membrane traces for 1D Purkinje-ventricle model. Two versions (Matlab .fig and PDF) are included for each degree of ischemia.
DOI: 10.6084/m9.figshare.4519961.v1
title: BEHAVBUGS_NoIndex_L001_R1_001.fastq

description: Raw, multiplexed 16S rRNA gene sequences (Illumina MiSeq 2x250 forward ("R1") and 12-nucleotide index ("R2")) derived from healthy human female fecal samples.<br>
DOI: 10.6084/m9.figshare.4519991.v1
title: Raw data: membrane voltage traces from 1D Purkinje-ventricle model

description: Raw data: membrane voltage traces from 1D Purkinje-ventricle model. To be plotted by plot_figures.m in this same project.
DOI: 10.6084/m9.figshare.4520006.v2
title: Voltage membrane traces for 1D Purkinje-ventricle model

description: This fileset contains:<br>- Figures: voltage membrane traces for 1D Purkinje-ventricle model. Two versions (Matlab .fig and PDF) are included for each degree of ischemia.<br>- Raw data: from which figures were made (raw_data.zip)<br>- Matlab code to generate the figures from raw data (plot_figures.m)
DOI: 10.6084/m9.figshare.4519961.v3
title: Gut-Brain Axis in Healthy Females

description: Raw, multiplexed 16S rRNA gene sequences (Illumina MiSeq 2x250 forward ("R1") and 12-nucleotide index ("R2")) derived from healthy human female fecal samples, and accompanying barcode metadata file.<br>
DOI: 10.6084/m9.figshare.4519961.v2
title: BEHAVBUGS_NoIndex_L001_R1_001.fastq

description: Raw, multiplexed 16S rRNA gene sequences (Illumina MiSeq 2x250 forward ("R1") and 12-nucleotide index ("R2")) derived from healthy human female fecal samples.<br>
DOI: 10.6084/m9.figshare.4519799
title: Supplementary Material for: Bronchial Aspiration of Capsule Endoscope

description: Capsule endoscope aspiration is an increasingly reported complication, potentially responsible for respiratory distress and asphyxia. This adverse event is primarily managed by rigid bronchoscopy when spontaneous expulsion does not occur. This complication is all the more detrimental to patients as it can delay or jeopardize further digestive exploration. We report direct repositioning of the capsule in the stomach at the same time as bronchoscopy, thus making second-line gastrointestinal endoscopy needless.
DOI: 10.6084/m9.figshare.4519784
title: Supplementary Material for: Cerebrospinal Fluid Biomarker-Based Diagnosis of Sporadic Creutzfeldt-Jakob Disease: A Validation Study for Previously Established Cutoffs

description: <b><i>Background:</i></b> Several biomarkers have been proposed to discriminate sporadic Creutzfeldt-Jakob disease (sCJD) from other dementias and control cases. However, their clinical accuracy depends on the PRNP codon 129 genotype, leaving it unclear how well established markers behave in untested conditions. <b><i>Methods:</i></b> We analyzed 14-3-3, tau, p-tau levels, and the p-tau/tau ratio in a population sample collected from Polish hospitals including nondementia, dementia, and definite sCJD cases and validated their parameters according to previously established cutoffs. Additionally, the correlation between biomarkers and disease duration as well as the influence of the PRNP129 polymorphism are reported. <b><i>Results:</i></b> The tau levels and p-tau/tau ratios differed considerably between sCJD and clinically characterized non-CJD cases (<i>p</i> &lt; 0.001). p-tau was only elevated in sCJD when compared to cases without dementia (<i>p</i> &lt; 0.05). Tau and the p-tau/tau ratio showed a sensitivity of 95 and 100%, respectively, in detecting sCJD cases. A negative correlation between tau levels and disease duration, but not the timing of lumbar puncture was observed. <b><i>Conclusion:</i></b> The present findings confirmed the value of the p-tau/tau ratio as a robust sCJD biomarker and suggest a role for tau as prognostic marker.
DOI: 10.6084/m9.figshare.4519799.v1
title: Supplementary Material for: Bronchial Aspiration of Capsule Endoscope

description: Capsule endoscope aspiration is an increasingly reported complication, potentially responsible for respiratory distress and asphyxia. This adverse event is primarily managed by rigid bronchoscopy when spontaneous expulsion does not occur. This complication is all the more detrimental to patients as it can delay or jeopardize further digestive exploration. We report direct repositioning of the capsule in the stomach at the same time as bronchoscopy, thus making second-line gastrointestinal endoscopy needless.
DOI: 10.5281/zenodo.4012409
title: Ontolex-lemon and TIAD versions of Apertium Occitan (post 1500)-Catalan dictionary

description: OntoLex-lemon and TSV conversion of Apertium Bidix. For more details, see https://www.aclweb.org/anthology/2020.lrec-1.401/ Authors of the original data: (c) 2005 Universitat d'Alacant (Transducens group) (c) 2005--2008 Generalitat de Catalunya (c) 2005 Universitat Pompeu Fabra (IULA) (c) 2007--2008 Prompsit Language Engineering S.L.
DOI: 10.6084/m9.figshare.4519760
title: Epilithic and endolithic microorganisms and deterioration on stone church facades subject to urban pollution in a sub-tropical climate

description: Weathering of two church facades in Rio de Janeiro was caused substantially by salts, mainly halite and gypsum, detected by SEM and chemical analyses, which cause physical stresses by deposition within the rock. Biofilm populations, determined by SEM and as operational taxonomic units (OTUs), degraded stone by penetration, solubilization and redeposition of minerals on their surfaces. Endolithic cyanobacteria were associated with gypsum deposits. Microbiomes were typical for high-stress environments, high salt, intense insolation, low water and low nutrients (eg halophilic <i>Rubrobacter</i>, <i>Salinicola</i>, <i>Sterigmatomyces</i>). The main colonizers on the church most affected by traffic (Nossa Senhora da Candelária – CA) were Actinobacteria; Gammaproteobacteria (chiefly <i>Pseudomonas</i>) were predominant on the site situated in a leafy square (São Francisco de Paula – SF). Major Gammaproteobacteria on CA were halophilic <i>Halomonas</i> and Rhodobacteriaceae. Fungal OTUs on both churches were principally dimorphic, yeast-like basidiomycetes. Many OTUs of thermophilic microorganisms (eg the Thermomicrobia class, Chloroflexi) were present. This is the first use of next generation sequencing (NGS) to study microbial biofilm interactions with metamorphic and granite buildings in an intensely urban, sub-tropical climate.
DOI: 10.5281/zenodo.4012408
title: Ontolex-lemon and TIAD versions of Apertium Occitan (post 1500)-Catalan dictionary

description: OntoLex-lemon and TSV conversion of Apertium Bidix. For more details, see https://www.aclweb.org/anthology/2020.lrec-1.401/ Authors of the original data: (c) 2005 Universitat d'Alacant (Transducens group) (c) 2005--2008 Generalitat de Catalunya (c) 2005 Universitat Pompeu Fabra (IULA) (c) 2007--2008 Prompsit Language Engineering S.L.
DOI: 10.6084/m9.figshare.4519760.v1
title: Epilithic and endolithic microorganisms and deterioration on stone church facades subject to urban pollution in a sub-tropical climate

description: Weathering of two church facades in Rio de Janeiro was caused substantially by salts, mainly halite and gypsum, detected by SEM and chemical analyses, which cause physical stresses by deposition within the rock. Biofilm populations, determined by SEM and as operational taxonomic units (OTUs), degraded stone by penetration, solubilization and redeposition of minerals on their surfaces. Endolithic cyanobacteria were associated with gypsum deposits. Microbiomes were typical for high-stress environments, high salt, intense insolation, low water and low nutrients (eg halophilic <i>Rubrobacter</i>, <i>Salinicola</i>, <i>Sterigmatomyces</i>). The main colonizers on the church most affected by traffic (Nossa Senhora da Candelária – CA) were Actinobacteria; Gammaproteobacteria (chiefly <i>Pseudomonas</i>) were predominant on the site situated in a leafy square (São Francisco de Paula – SF). Major Gammaproteobacteria on CA were halophilic <i>Halomonas</i> and Rhodobacteriaceae. Fungal OTUs on both churches were principally dimorphic, yeast-like basidiomycetes. Many OTUs of thermophilic microorganisms (eg the Thermomicrobia class, Chloroflexi) were present. This is the first use of next generation sequencing (NGS) to study microbial biofilm interactions with metamorphic and granite buildings in an intensely urban, sub-tropical climate.
DOI: 10.6084/m9.figshare.4519784.v1
title: Supplementary Material for: Cerebrospinal Fluid Biomarker-Based Diagnosis of Sporadic Creutzfeldt-Jakob Disease: A Validation Study for Previously Established Cutoffs

description: <b><i>Background:</i></b> Several biomarkers have been proposed to discriminate sporadic Creutzfeldt-Jakob disease (sCJD) from other dementias and control cases. However, their clinical accuracy depends on the PRNP codon 129 genotype, leaving it unclear how well established markers behave in untested conditions. <b><i>Methods:</i></b> We analyzed 14-3-3, tau, p-tau levels, and the p-tau/tau ratio in a population sample collected from Polish hospitals including nondementia, dementia, and definite sCJD cases and validated their parameters according to previously established cutoffs. Additionally, the correlation between biomarkers and disease duration as well as the influence of the PRNP129 polymorphism are reported. <b><i>Results:</i></b> The tau levels and p-tau/tau ratios differed considerably between sCJD and clinically characterized non-CJD cases (<i>p</i> &lt; 0.001). p-tau was only elevated in sCJD when compared to cases without dementia (<i>p</i> &lt; 0.05). Tau and the p-tau/tau ratio showed a sensitivity of 95 and 100%, respectively, in detecting sCJD cases. A negative correlation between tau levels and disease duration, but not the timing of lumbar puncture was observed. <b><i>Conclusion:</i></b> The present findings confirmed the value of the p-tau/tau ratio as a robust sCJD biomarker and suggest a role for tau as prognostic marker.
DOI: 10.6084/m9.figshare.12081147.v19
title: Data for research on "Effect of plate length on subduction kinematics and slab geometry: Insights from buoyancy-driven analog subduction models".

description: Data for research on "Effect of plate length on subduction kinematics and slab geometry: Insights from buoyancy-driven analog subduction models".
DOI: 10.6084/m9.figshare.4519745
title: datasetupload.xlsx

description: the data is about the profitability of RFID companies in China
DOI: 10.6084/m9.figshare.4519724
title: Proteomics in cardiovascular disease: recent progress and clinical implication and implementation

description: <b>Introduction</b>: Although multiple efforts have been initiated to shed light into the molecular mechanisms underlying cardiovascular disease, it still remains one of the major causes of death worldwide. Proteomic approaches are unequivocally powerful tools that may provide deeper understanding into the molecular mechanisms associated with cardiovascular disease and improve its management. <b>Areas covered</b>: Cardiovascular proteomics is an emerging field and significant progress has been made during the past few years with the aim of defining novel candidate biomarkers and obtaining insight into molecular pathophysiology. To summarize the recent progress in the field, a literature search was conducted in PubMed and Web of Science. As a result, 704 studies from PubMed and 320 studies from Web of Science were retrieved. Findings from original research articles using proteomics technologies for the discovery of biomarkers for cardiovascular disease in human are summarized in this review. <b>Expert commentary</b>: Proteins associated with cardiovascular disease represent pathways in inflammation, wound healing and coagulation, proteolysis and extracellular matrix organization, handling of cholesterol and LDL. Future research in the field should target to increase proteome coverage as well as integrate proteomics with other omics data to facilitate both drug development as well as clinical implementation of findings.
DOI: 10.6084/m9.figshare.4519745.v1
title: datasetupload.xlsx

description: the data is about the profitability of RFID companies in China
DOI: 10.6084/m9.figshare.4519709
title: Redescription of <i>Notarius grandicassis</i> and <i>Notarius parmocassis</i> (Siluriformes; Ariidae), with insights into morphological plasticity and evidence of incipient speciation

description: The Thomas sea catfish is characterized by a highly variable parietosupraoccipital process, which has been recognized as intraspecific variation or phenotypic plasticity. On the basis of this variation, three nominal species have been described, with two of them currently considered to be junior synonyms. Here, the <i>Notarius grandicassis</i> species complex is reviewed, considering the geographic variation of its morphological traits. <i>Notarius grandicassis</i> from north-eastern South America, and <i>Notarius parmocassis</i>, from eastern and southern Brazil, are redescribed as distinct evolutionary units, even though they are not differentiated by partial sequences of the mitochondrial genes CytB and ATPase 8/6. This condition is interpreted as a consequence of the recent evolutionary history of these species, which are found in distinct geographic areas with different environmental conditions.
DOI: 10.6084/m9.figshare.4519709.v1
title: Redescription of <i>Notarius grandicassis</i> and <i>Notarius parmocassis</i> (Siluriformes; Ariidae), with insights into morphological plasticity and evidence of incipient speciation

description: The Thomas sea catfish is characterized by a highly variable parietosupraoccipital process, which has been recognized as intraspecific variation or phenotypic plasticity. On the basis of this variation, three nominal species have been described, with two of them currently considered to be junior synonyms. Here, the <i>Notarius grandicassis</i> species complex is reviewed, considering the geographic variation of its morphological traits. <i>Notarius grandicassis</i> from north-eastern South America, and <i>Notarius parmocassis</i>, from eastern and southern Brazil, are redescribed as distinct evolutionary units, even though they are not differentiated by partial sequences of the mitochondrial genes CytB and ATPase 8/6. This condition is interpreted as a consequence of the recent evolutionary history of these species, which are found in distinct geographic areas with different environmental conditions.