cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57804/z6dd-f630
title: Statistical dataset on active Facebook users living outside of their country of origin in the European Union
title: Statistical dataset on active Facebook users living outside of their country of origin in the European Union

description: This statistical dataset contains estimates on the number of active online Facebook users living outside of their country of origin within the European Union. The dataset includes information on Facebook users' age, gender, country of residence, and country of previous residence. The data is divided in the number of Monthly Active Users and Daily Active Users. The data was collected through standard CSV format via an advertising API platform by using an R Studio code, and the data collection was conducted twice a month from January to November 2021.

The dataset was originally published in DiVA and moved to SND in 2024.
description: Detta statistiska dataset innehåller uppskattningar av antalet aktiva Facebook-användare online som bor utanför sitt ursprungsland inom Europeiska unionen.

Se engelsk beskrivning för mer information.

Datasetet har ursprungligen publicerats i DiVA och flyttades över till SND 2024.
DOI: 10.57804/2db9-b575
title: Metabolic Profiling of Obesity With and Without the Metabolic Syndrome - A Multi-Sample Evaluation : Supplementary material
title: Metabolic Profiling of Obesity With and Without the Metabolic Syndrome - A Multi-Sample Evaluation : Supplementary material

description: Pdf file with a total of 5 Supplementary Tables:

Supplementary Table 1. An overview of metabolite differences between certain groups.
Supplementary Table 2. Pathway enrichment and topographical analysis for the 427 validated metabolites that differed between obese subjects without MetS and normal-weight without MetS.
Supplementary Table 3. Pathway enrichment and topographical analysis for the 196 validated metabolites that differed between obese subjects with and without MetS.
Supplementary Table 4. Relationships between metabolites and BMI and number of MetS components in the continuous analysis.
Supplementary Table 5. Pathway enrichment and topographical analysis for the 371 validated metabolites that differed between overweight subjects without MetS and normal-weight without MetS.
Supplementary Table 6. Pathway enrichment and topographical analysis for the 417 metabolites being related to BMI in subjects with no MetS components.

Pdf file revised 211202. The old version is archived.

The dataset was originally published in DiVA and moved to SND in 2024.
description: Pdf file with a total of 5 Supplementary Tables:

Supplementary Table 1. An overview of metabolite differences between certain groups.
Supplementary Table 2. Pathway enrichment and topographical analysis for the 427 validated metabolites that differed between obese subjects without MetS and normal-weight without MetS.
Supplementary Table 3. Pathway enrichment and topographical analysis for the 196 validated metabolites that differed between obese subjects with and without MetS.
Supplementary Table 4. Relationships between metabolites and BMI and number of MetS components in the continuous analysis.
Supplementary Table 5. Pathway enrichment and topographical analysis for the 371 validated metabolites that differed between overweight subjects without MetS and normal-weight without MetS.
Supplementary Table 6. Pathway enrichment and topographical analysis for the 417 metabolites being related to BMI in subjects with no MetS components.

Pdf file revised 211202. The old version is archived.

Datasetet har ursprungligen publicerats i DiVA och flyttades över till SND 2024.
DOI: 10.57804/82sz-rg03
title: Confirming existing parameterizations for methane gas transfer velocity in lakes based on direct and high-frequent methods
title: Confirming existing parameterizations for methane gas transfer velocity in lakes based on direct and high-frequent methods

description: Data set for publication 'Gas transfer velocity determination for methane in a temperate lake using direct and high-frequency methods'.

The dataset was originally published in DiVA and moved to SND in 2024.
description: Se engelsk beskrivning.

Datasetet har ursprungligen publicerats i DiVA och flyttades över till SND 2024.
DOI: 10.5878/002219
title: ESS 5 – European Social Survey 2010, Sweden
title: ESS 5 – Den europeiska socialundersökningen 2010, Sverige
title: ESS5

description: This survey is the Swedish part of the 2010 'European Social Survey ' (ESS), and is focusing on family, work and well-being as well as justice. The survey also includes data on media and social trust, politics, subjective well-being, household characteristics and socio-demographics as well as human values as part of the core module of ESS.

Purpose:

The European Social Survey (the ESS) is an academically-driven social survey designed to chart and explain the interaction between Europe's changing institutions and the attitudes, beliefs and behaviour patterns of its diverse populations.
description: Denna studie innehåller den svenska delen av ESS 2010 och fokuserar på familjen, arbete, personligt välbefinnande och rättvisa. I undersökningen ingår också uppgifter om medieanvändning och socialt förtroende, politik, religion, immigration, rädsla för brott, hushållets sammansättning och socio-demografisk profil samt mänskliga värderingar som en del av kärnmodulen för ESS. Den europeiska socialundersökningen/European Social Survey (ESS) är en attityd- och beteendeundersökning som sedan år 2002 genomförs vart annat år i mer än 30 europeiska länder. Upplägget gör det möjligt att studera såväl förändring som dagsaktuella frågor.

Syfte:

European Social Survey (ESS) är en akademiskt driven socialundersökning som syftar till att kartlägga och förklara samspelet mellan Europas föränderliga institutioner och attityder, övertygelser och beteendemönster bland olika befolkningsgrupper.
DOI: 10.57804/tq7e-n687
title: Ciliate grazing on the bloom-forming microalga Gonyostomum semen
title: Ciliate grazing on the bloom-forming microalga Gonyostomum semen

description: Cell count data set from infection experiment containing 8 columns, which are described below.
Day: Day of the experiment.
Date: Date of the experiment.
Code: Unique identifier for each combination of G. semen and ciliate strains.
G.semen_strain: Identifier for the G. semen strain used in this treatment.
Ciliate_strain: Identifier for the ciliate strain used in this treatment. G. semen mono-cultures (without ciliates) are named "control".
Treatment: Distinguishes control and grazing (with ciliates) treaments.
Count: Specifies which taxon was counted (G. semen or ciliate).
cells/ml: Cell concentration counted under an inverted microscope in cells/mL.

The freshwater raphidophyte Gonyostomum semen forms extensive summer blooms in northern European humic lakes. The development of these blooms might be facilitated by a lack of natural top-down control, as few zooplankton species are able to prey on these large algal cells (up to 100µm) that expel trichocysts upon physical stress. In this study, we describe a small ciliate species (&lt;17µm) that preys on G. semen by damaging the cell membrane until cytoplasm and organelles spill out. Sequencing of clonal cultures of the ciliate tentatively identified it as the prostomatid species Urotricha pseudofurcata. Grazing experiments illustrated that feeding by U. cf. pseudofurcata can significantly reduce cell concentrations of the microalga. However, differences in cell size and growth rate between two investigated ciliate strains resulted in noticeably different grazing pressure. Environmental sequencing data from five different lakes supported potential interactions between the two species. Urotricha cf. pseudofurcata might, thus, play an important role in aquatic ecosystems that are regularly dominated by G. semen, reducing the abundance of this bloom-forming microalga and enabling transfer of organic carbon to higher trophic levels.

The dataset was originally published in DiVA and moved to SND in 2024.
description: Cellräkningsdata från infektionsexperiment.

Se engelsk beskrivning för mer information. 

Datasetet har ursprungligen publicerats i DiVA och flyttades över till SND 2024.
DOI: 10.57804/sj2d-b265
title: Seasonally variable interactions between dissolved organic matter and mineral particles in an agricultural river (data set)
title: Seasonally variable interactions between dissolved organic matter and mineral particles in an agricultural river (data set)

description: Dataset containing 2 excel files:
- Fyris_EEMs contains all fluorescence excitation emission spectra (corrected)
- Fyris_data contains all other data

The dataset was originally published in DiVA and moved to SND in 2024.
description: Dataset containing 2 excel files:
- Fyris_EEMs contains all fluorescence excitation emission spectra (corrected)
- Fyris_data contains all other data

Datasetet har ursprungligen publicerats i DiVA och flyttades över till SND 2024.
DOI: 10.5878/09xv-2w53
title: Length, age and estimated back-calculated length of pike (Esox lucius) in relation to water temperature from Lake Mälaren and the Swedish Baltic Sea archipelago 1963-2019 - Time series of monthly average surface water temperature (&lt;0.5m) during summer at Kvädöfjärden (Baltic Sea) and Lake Mälaren.
title: Längd, ålder och uppskattade tillbakaräknade längder av gäddor (Esox lucis) i förhållande till vattentemperatur från Mälaren och svenska Östersjökusten 1963-2019 - Vattentemperaturer i Mälaren och Kvädöfjärden.

description: Data on estimated back-calculated body growth from both harvested and non-harvested populations of northern pike over 50 years along the Baltic Sea coast and in Lake Mälaren, Sweden. The aim is to study spatial and temporal variation in body growth, and especially how body growth relates to variation in water temperature. Data on surface water temperature from Kvädöfjärden (Batltic Sea) and Lake Mälaren during the study period. See detailed description of methods and analyses in the original article.

Time series of monthly average surface water temperature during summer at Kvädöfjärden (Baltic Sea) and Lake Mälaren.
description: Data på uppskattad tillbakatillväxt av gäddor från över 50 år från både fiskade och ofiskade områden längs svensk Östersjökust och Mälaren. Syftet är att studera hur tillväxtmönster har varierat över tid och rum, speciellt hur kroppstillväxt relaterar till variation i vattentemperatur. Data på ytvattentemperaturer från Kvädöfjärden (Östersjön) och Mälaren. Se utförlig metodbeskrivning i originalartikeln.

Tidsserie av medeltemperatur av ytvatten (&lt;0.5 m) per månad under sommaren i Kvädöfjärden (Östersjön) och Mälaren.
DOI: 10.57804/59n7-ap07
title: Type 2 diabetes and Change in Total Hip Bone Area and Bone Mineral Density in Elderly Swedish Men and Women: Supplementary material
title: Type 2 diabetes and Change in Total Hip Bone Area and Bone Mineral Density in Elderly Swedish Men and Women: Supplementary material

description: Supporting data to the manuscript "Type 2 diabetes and Change in Total Hip Bone Area and Bone Mineral Density in Elderly Swedish Men and Women"

In SMCC, Fasting plasma glucose concentrations were analysed using three different methods depending on date of collection; glucose dehydrogenase reagent (Bergman & Beving, instrument Advia 1650, Stockholm, Sweden), glucose oxidase method (Bayer, instrument Advia 1650, Leverkusen, Germany), and hexokinase method (Abbott, Abbott Architect, Illinois, USA).

In PIVUS, fasting plasma glucose concentrations were analysed using the standard method at Uppsala University Hospital.

In ULSAM, fasting plasma glucose concentrations (mmol/l) were measured by the glucose dehydrogenase method (Gluc-DH, Merck, Darmstadt, Germany).

The dataset was originally published in DiVA and moved to SND in 2024.
description: Supporting data to the manuscript "Type 2 diabetes and Change in Total Hip Bone Area and Bone Mineral Density in Elderly Swedish Men and Women"

Se engelsk beskrivning för mer information.

Datasetet har ursprungligen publicerats i DiVA och flyttades över till SND 2024.
DOI: 10.57804/da4h-tr31
title: SUPPLEMENTARY MATERIALS for Mitochondrial DNA genome variation in the Swedish population
title: SUPPLEMENTARY MATERIALS for Mitochondrial DNA genome variation in the Swedish population

description: The data consists of:

- Table S1. The haplogroup breakdown for the 934 SweGen haplotypes included in the final mitochondrial genome dataset.

- Figure S1. Graphical description of the average read depths observed in the SweGen dataset.

- Figure S2. The distribution of read depth for the 16,569 positions of the mitochondrial genome 
based on the average observed in a subset of 100 representative SweGen haplotypes.

- Figure S3. The box-and-whisker plot presents the distribution of average variant frequency for each 
coverage classification group.

The dataset was originally published in DiVA and moved to SND in 2024.
description: The data consists of:

- Table S1. The haplogroup breakdown for the 934 SweGen haplotypes included in the final mitochondrial genome dataset.

- Figure S1. Graphical description of the average read depths observed in the SweGen dataset.

- Figure S2. The distribution of read depth for the 16,569 positions of the mitochondrial genome 
based on the average observed in a subset of 100 representative SweGen haplotypes.

- Figure S3. The box-and-whisker plot presents the distribution of average variant frequency for each 
coverage classification group.

Datasetet har ursprungligen publicerats i DiVA och flyttades över till SND 2024.
DOI: 10.57804/2ea2-9277
title: Raw-Data: A Reusable Characterization Of The Memory System Behavior Of SPEC 2017 And SPEC 2006
title: Raw-Data: A Reusable Characterization Of The Memory System Behavior Of SPEC 2017 And SPEC 2006

description: This dataset accompanies the ISPASS 2020 extended abstract: Architecturally-independent and time-based characterization of SPEC CPU 2017 and TACO paper: A Reusable Characterization of the Memory System Behavior of SPEC2017 and SPEC2006.

In this data you can find 2 folders: SPEC06 and SPEC17. These 2 folders contain data for benchmarks from SPEC 2006 and SPEC 2017 respectively. 

Inside the folder of SPEC06/SPEC17 you find number of folders each with the name of a specific benchmark. 

Inside each benchmark folder you find 2 folders with the name of Prefetch and No-Prefetch. The prefetch folder contains data from experiments with prefetching and no-prefetch contains data without prefetching. 

Inside the Prefetch (No-Prefetch) folder you can find 16 files each with a specific number: 32k means this is data.

The dataset was originally published in DiVA and moved to SND in 2024.
description: This dataset accompanies the ISPASS 2020 extended abstract: Architecturally-independent and time-based characterization of SPEC CPU 2017 and TACO paper: A Reusable Characterization of the Memory System Behavior of SPEC2017 and SPEC2006.

In this data you can find 2 folders: SPEC06 and SPEC17. These 2 folders contain data for benchmarks from SPEC 2006 and SPEC 2017 respectively. 

Inside the folder of SPEC06/SPEC17 you find number of folders each with the name of a specific benchmark. 

Inside each benchmark folder you find 2 folders with the name of Prefetch and No-Prefetch. The prefetch folder contains data from experiments with prefetching and no-prefetch contains data without prefetching. 

Inside the Prefetch (No-Prefetch) folder you can find 16 files each with a specific number: 32k means this is data.

Datasetet har ursprungligen publicerats i DiVA och flyttades över till SND 2024.
DOI: 10.57804/n0ca-ed03
title: Adverse Childhood Experiences are associated with choice of partner, both partners' relationship and psychosocial health as reported one year after birth of a common child. A cross-sectional study.
title: Adverse Childhood Experiences are associated with choice of partner, both partners' relationship and psychosocial health as reported one year after birth of a common child. A cross-sectional study.

description: The aims of the study were to investigate the ACEs in couples, to examine the extent of assortative mating and to investigate the association between the relationship of the load of ACEs within couples and health outcomes, one year after the birth of a common child. At antenatal clinics in Sweden 818 couples were recruited and investigated one year after the birth of a common child answering a questionnaire including the exposure to ten ACE categories and several outcome variables.

The dataset was originally published in DiVA and moved to SND in 2024.
description: The aims of the study were to investigate the ACEs in couples, to examine the extent of assortative mating and to investigate the association between the relationship of the load of ACEs within couples and health outcomes, one year after the birth of a common child. At antenatal clinics in Sweden 818 couples were recruited and investigated one year after the birth of a common child answering a questionnaire including the exposure to ten ACE categories and several outcome variables.

Datasetet har ursprungligen publicerats i DiVA och flyttades över till SND 2024.
DOI: 10.57804/97wz-g703
title: Supplementary files to Oogenesis and lipid metabolism in the deep-sea sponge Phakellia ventilabrum: a histological, lipidomic and transcriptomic approach, Manuscript IV, Thesis
title: Supplementary files to Oogenesis and lipid metabolism in the deep-sea sponge Phakellia ventilabrum: a histological, lipidomic and transcriptomic approach, Manuscript IV, Thesis

description: In this study, we used histology, lipidome profiling (UHPLC-MS), and transcriptomic analysis (RNA-seq) on the deep-sea sponge Phakellia ventilabrum (Demospongiae, Bubarida), a key species of North-Atlantic sponge grounds, with the goal to (i) assess the reproductive strategy and seasonality of this species, (ii) examine the relative changes in the lipidome signal and the gene expression patterns of the enzymes participating in lipid metabolism during oogenesis.

The dataset was originally published in DiVA and moved to SND in 2024.
description: In this study, we used histology, lipidome profiling (UHPLC-MS), and transcriptomic analysis (RNA-seq) on the deep-sea sponge Phakellia ventilabrum (Demospongiae, Bubarida), a key species of North-Atlantic sponge grounds, with the goal to (i) assess the reproductive strategy and seasonality of this species, (ii) examine the relative changes in the lipidome signal and the gene expression patterns of the enzymes participating in lipid metabolism during oogenesis.

Datasetet har ursprungligen publicerats i DiVA och flyttades över till SND 2024.
DOI: 10.5281/zenodo.15277327
title: Discovering the Complete Enhancer Map of Human Herpesviruses Using a Natural Language Processing Model: supplemental files

description: Abstract

Enhancers are distal cis-regulatory elements that dictate complex transcriptional repertoire. Herpes viruses show programmed latent and lytic gene expression based on the infected tissue and physiological cell state. Kaposi sarcoma-associated herpes virus (KSHV), an oncogenic dsDNA virus, possesses several enhancers that regulate latency and lytic gene expression. Here, we present a natural language processing model (NLP)-based tool, ENHAvir, that was trained with only six KSHV viral enhancer sequences and successfully predicted enhancer elements in other viruses and the human genome. ENHAvir identified known enhancers and predicted novel enhancer elements in the human herpes viruses; HSV-1, HSV-2, VZV, HCMV, HHV-6, HHV-7, and EBV. In the case of EBV, the activity of all predicted enhancers, BamHI-W repeats/BWRF1, BPLF-1, BALF-3, BKRF1, and terminal repeat (TR), was confirmed in enhancer reporter assay. The EBV TR presents features of a “viral super-enhancer” that is responsive to the viral activator ZTA and lytic inducers, suggesting a role in the latency to lytic transition. Interestingly, ENHAvir also precisely identified enhancers in the human genome. Once we obtained the enhancer sequences of all herpes viruses, we were able to compare them with human enhancers. This analysis revealed conserved enhancer signatures and the involvement of Alu elements.

 

Zenodo contents

This repository contains supplemental files of ENHAvir 2.0 training data, MEME analyses, and the phylogenetic tree raw file.
DOI: 10.57804/svc2-k396
title: Data set from the project of warming-enchanced priority effects
title: Data set from the project of warming-enchanced priority effects

description: The recipient communities were comprised of three different lake inocula (Lötsjön, Erken, or Grytsjön) inoculated separately into “foreign” Baltic Sea incubation medium. The dispersal source constituted of the Baltic Sea community inoculated into cell-free incubation medium. Both the recipient (early-arriving lake bacteria) and the dispersal source (late-arriving Baltic Sea bacteria) communities were incubated at three different temperatures (15, 20 and 25°C). Coalescence (dispersal) events were applied at three rates by replacing 0%, 5% and 20% cells in the recipient communities with cells from the dispersal source. The recipient communities were always mixed with the corresponding dispersal source replicate at the respective temperature level.

The dataset was originally published in DiVA and moved to SND in 2024.
description: The recipient communities were comprised of three different lake inocula (Lötsjön, Erken, or Grytsjön) inoculated separately into “foreign” Baltic Sea incubation medium. The dispersal source constituted of the Baltic Sea community inoculated into cell-free incubation medium. Both the recipient (early-arriving lake bacteria) and the dispersal source (late-arriving Baltic Sea bacteria) communities were incubated at three different temperatures (15, 20 and 25°C). Coalescence (dispersal) events were applied at three rates by replacing 0%, 5% and 20% cells in the recipient communities with cells from the dispersal source. The recipient communities were always mixed with the corresponding dispersal source replicate at the respective temperature level.

Datasetet har ursprungligen publicerats i DiVA och flyttades över till SND 2024.
DOI: 10.57804/4amr-5p80
title: Supplemental data: Hotspots of diffusive CO₂ and CH₄ emission from tropical reservoirs shift through time
title: Supplemental data: Hotspots of diffusive CO₂ and CH₄ emission from tropical reservoirs shift through time

description: Ten sampling campaigns were performed in four tropical reservoirs in Brazil between 2015 and 2017. The reservoirs are located in three different biomes, and are different in size, age, type of flooded soil, trophic state, and type of use.

We performed spatially resolved measurements of dissolved CO2 and CH4 surface water concentrations and their gas-exchange coefficients (k) to compute diffusive carbon flux from four contrasting tropical reservoirs across Brazil during different hydrological seasons. We used an online equilibration system to measure dissolved CO2 and CH4 concentrations; we estimated k from floating chamber deployments in conjunction with discrete CO2 and CH4 water concentration measurements. Diffusive CO2 emissions were higher during dry season than during rainy season, whereas there were no consistent seasonal patterns for diffusive CH4 emissions. 

The dataset was originally published in DiVA and moved to SND in 2024.
description: Tio provtagningskampanjer genomfördes i fyra tropiska reservoarer i Brasilien mellan 2015 och 2017. Reservoarerna är belägna i tre olika biomer, och skiljer sig i storlek, ålder, typ av översvämmad jord, trofiskt tillstånd och typ av användning.

Se engelsk beskrivning för mer information.

Datasetet har ursprungligen publicerats i DiVA och flyttades över till SND 2024.