cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.1594/pangaea.833415
title: Turbulence measurements performed in the North Atlantic during the James Cook cruise JC087, March 2013

description: During the cruise the turbulence probe MSS050 was used for microstructure measurements. The profiler is produced by Sea and Sun Technology GmbH in co-operation with ISW Wassermesstechnik. The probe was equipped with 2 velocity microstructure shear sensors, a microstructure temperature sensor, standard CTD sensors for precision measurements, a vibration control sensor, a two component tilt sensor, a fluorescence sensor and surface detection sensor (SD) to indicate the water surface hit at rising measurements. The sampling rate for all sensors is 1024 samples per second, the resolution 16 bit. During the MSS measurements, the ship was moving with speed approx. 0.5-1.0 knots with respect to the water against the wind. In order to take into account the intermittent nature of marine turbulence, repeated MSS measurements were carried out in bursts of typically 10 profiles per station. The measurement interval was approximately 7 (10) min for a profile to 140 (200) dbar. During JC87 cruise 8 series of turbulence measurements were conducted. Fluorescence data was obtained on the 5 of them.
DOI: 10.1594/pangaea.431006
title: Daily sea level from coastal tide gauge station Portland in 1933 (Research quality database)
DOI: 10.1594/pangaea.431009
title: Daily sea level from coastal tide gauge station Portland in 1936 (Research quality database)
DOI: 10.1594/pangaea.328876
title: Water temperature XBT profiles from cruise FI74199902285
DOI: 10.1594/pangaea.423433
title: Daily fast delivery sea level from coastal tide gauge station Hanimaadhoo in 1997
DOI: 10.1594/pangaea.432832
title: Daily sea level from coastal tide gauge station Wilmington in 1990 (Research quality database)
DOI: 10.1594/pangaea.803542
title: Physical oceanography measured on water bottle samples during cruise Zvezda_122
DOI: 10.1594/pangaea.430969
title: Daily sea level from coastal tide gauge station Ponta_Delgada-B in 1998 (Research quality database)
DOI: 10.1594/pangaea.440610
title: Hourly sea level from coastal tide gauge station San_Carlos in 1973 (Research quality database)
DOI: 10.1594/pangaea.249514
title: Silicoflagellate abundance of Hole 67-495

description: Relative abundance: D = dominant, A = abundant, C = common, F = few, R = rare, T = trace, P = present (numerical values are abundance in percent)
DOI: 10.1594/pangaea.951955
title: Attention points from ROV survey PS122/3_38-85 on 2020-05-01, survey 1

description: Attention points as logged by the operators in the recording software Spot.On for remotely operated vehicle (ROV) surveys during the Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) expedition between November 2019 and September 2020.
DOI: 10.1594/pangaea.951953
title: Attention points from ROV survey PS122/3_37-20 on 2020-04-21, survey 2

description: Attention points as logged by the operators in the recording software Spot.On for remotely operated vehicle (ROV) surveys during the Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) expedition between November 2019 and September 2020.
DOI: 10.1594/pangaea.424244
title: Daily fast delivery sea level from coastal tide gauge station Papeete-B in 1985
DOI: 10.1594/pangaea.425318
title: Daily sea level from coastal tide gauge station Aburatsu in 1977 (Research quality database)
DOI: 10.1594/pangaea.428847
title: Daily sea level from coastal tide gauge station Khepupara in 1987 (Research quality database)
DOI: 10.1594/pangaea.118417
title: Particulate absorption (detrital) data at station TT045_8-2
DOI: 10.1594/pangaea.420557
title: Hourly delayed mode sea level from coastal tide gauge station Neah_Bay in 1980
DOI: 10.1594/pangaea.423477
title: Daily fast delivery sea level from coastal tide gauge station Honiara in 1999
DOI: 10.1594/pangaea.429906
title: Daily sea level from coastal tide gauge station Mera in 1979 (Research quality database)
DOI: 10.1594/pangaea.828290
title: Basic measurements of radiation at station Nauru Island (2010-11)
DOI: 10.1594/pangaea.262104
title: Major-element chemical analyses of Hole 39-353B
DOI: 10.1594/pangaea.430968
title: Monthly sea level from coastal tide gauge station Ponta_Delgada-B, 1998-2000 (Research quality database)
DOI: 10.1594/pangaea.425014
title: Daily fast delivery sea level from coastal tide gauge station Townsville in 1998
DOI: 10.1594/pangaea.951954
title: Attention points from ROV survey PS122/3_38-50 on 2020-04-28, survey 1

description: Attention points as logged by the operators in the recording software Spot.On for remotely operated vehicle (ROV) surveys during the Multidisciplinary drifting Observatory for the Study of Arctic Climate (MOSAiC) expedition between November 2019 and September 2020.
DOI: 10.1594/pangaea.126195
title: Nitrogen-15 uptake rates of station TT007_12-TM2
DOI: 10.1594/pangaea.423137
title: Daily fast delivery sea level from coastal tide gauge station Easter_Island-E in 1993
DOI: 10.1594/pangaea.841751
title: Basic measurements of radiation at station Momote (2013-05)
DOI: 10.1594/pangaea.264379
title: Dive depth frequency of crabeater seal DRE1998_cra_y_m_11 from Drescher Inlet
DOI: 10.6084/m9.figshare.29266403
title: Ontogenetic changes in food consumption and performance of pacu (<i>Piaractus mesopotamicus</i>) post-larvae and two hybrids in a semi-intensive system

description: This study evaluated ontogenic changes in food consumption and post-larval growth of pacu (<i>Piaractus mesopotamicus</i>) and the hybrids patinga (<i>P. mesopotamicus x P. brachypomus</i>) and tambacu (<i>Colossoma macropomum</i> x <i>P. mesopotamicus</i>) in a semi-intensive system with daily offer commercial feed and fertilized water to promote plankton growth. In the first week, all groups mainly consumed resting eggs of Cladocera (epiphytic), gradually diversifying their diet. Pacu primarily consumed immature bryozoans, patinga ingested Chironomidae larvae, and tambacu fed on Cladocera and Copepoda. Tambacu showed significantly greater growth in standard length and weight compared to pacu and patinga (<i>p</i> &lt; .01); however, further studies on zootechnical and environmental aspects are needed. This is the first study to investigate the feeding of post-larvae of round fish and their hybrids. The results indicate a preference for natural foods, highlighting the need for future research to develop feeding protocols with a greater share of natural foods.
DOI: 10.6084/m9.figshare.29266403.v1
title: Ontogenetic changes in food consumption and performance of pacu (<i>Piaractus mesopotamicus</i>) post-larvae and two hybrids in a semi-intensive system

description: This study evaluated ontogenic changes in food consumption and post-larval growth of pacu (<i>Piaractus mesopotamicus</i>) and the hybrids patinga (<i>P. mesopotamicus x P. brachypomus</i>) and tambacu (<i>Colossoma macropomum</i> x <i>P. mesopotamicus</i>) in a semi-intensive system with daily offer commercial feed and fertilized water to promote plankton growth. In the first week, all groups mainly consumed resting eggs of Cladocera (epiphytic), gradually diversifying their diet. Pacu primarily consumed immature bryozoans, patinga ingested Chironomidae larvae, and tambacu fed on Cladocera and Copepoda. Tambacu showed significantly greater growth in standard length and weight compared to pacu and patinga (<i>p</i> &lt; .01); however, further studies on zootechnical and environmental aspects are needed. This is the first study to investigate the feeding of post-larvae of round fish and their hybrids. The results indicate a preference for natural foods, highlighting the need for future research to develop feeding protocols with a greater share of natural foods.
DOI: 10.6084/m9.figshare.29480069
title: Characterization of serum IgM and development of an indirect ELISA for evaluation of antigen-specific IgM in serum and skin mucus of Nile tilapia (<i>Oreochromis niloticus</i>)

description: The study aimed to characterize the serum immunoglobulin M (IgM) and develop an enzyme-linked immunosorbent assay (ELISA) for antigen-specific IgM assessment in Nile tilapia (<i>Oreochromis niloticus</i>). IgM was purified using ammonium sulfate precipitation and protein A chromatography. Native gradient polyacrylamide gel electrophoresis (PAGE) revealed a ~878.4 kDa band with purified IgM, while sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) showed heavy and light chains of ~82.2 and ~28.2 kDa, respectively. A rabbit anti-Nile tilapia IgM was produced and its specificity verified. The antiserum also cross-reacted with IgM from Indian major carps (IMCs). One indirect ELISA was developed with this antiserum to quantify IgM concentration (1.57 ± 0.07 mg/ml) in the Nile tilapia serum. Another indirect ELISA was standardized to assess antigen-specific IgM levels in serum and skin mucus over 90 days following immunization with inactivated <i>Enterobacter cloacae</i>. This ELISA could be useful for assessing immune responses during infection or vaccination in tilapia.
DOI: 10.6084/m9.figshare.29480069.v1
title: Characterization of serum IgM and development of an indirect ELISA for evaluation of antigen-specific IgM in serum and skin mucus of Nile tilapia (<i>Oreochromis niloticus</i>)

description: The study aimed to characterize the serum immunoglobulin M (IgM) and develop an enzyme-linked immunosorbent assay (ELISA) for antigen-specific IgM assessment in Nile tilapia (<i>Oreochromis niloticus</i>). IgM was purified using ammonium sulfate precipitation and protein A chromatography. Native gradient polyacrylamide gel electrophoresis (PAGE) revealed a ~878.4 kDa band with purified IgM, while sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) showed heavy and light chains of ~82.2 and ~28.2 kDa, respectively. A rabbit anti-Nile tilapia IgM was produced and its specificity verified. The antiserum also cross-reacted with IgM from Indian major carps (IMCs). One indirect ELISA was developed with this antiserum to quantify IgM concentration (1.57 ± 0.07 mg/ml) in the Nile tilapia serum. Another indirect ELISA was standardized to assess antigen-specific IgM levels in serum and skin mucus over 90 days following immunization with inactivated <i>Enterobacter cloacae</i>. This ELISA could be useful for assessing immune responses during infection or vaccination in tilapia.
DOI: 10.15468/dl.955nnc
title: Occurrence Download

description: A dataset containing 2066550 records in GBIF matching the query:
SELECT
 kingdom,
 phylum,
 class,
 family,
 genus,
 species,
 stateprovince,
 occurrencestatus,
 decimallatitude,
 decimallongitude,
 scientificname,
 "year"
FROM
 occurrence
WHERE
 GBIF_WITHIN('MULTIPOLYGON (((116.41308869400007 8.7168079810000449,
 108.05251232400008 2.7515820960000497,
 109.79398409700008 -4.3399782169999526,
 117.30508508800006 -4.2936775569999668,
 119.95650657300007 3.4961723070000517,
 119.10608628200009 7.0632129710000413,
 116.41308869400007 8.7168079810000449)))', occurrence.decimallatitude, occurrence.decimallongitude) = TRUE

 The dataset's 2066550 records were derived from 1028 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055657-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/5tsbsb
title: PAN-00126413 - coin/coin-related, Antoninus Pius (138-161), denarius

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00126413&lt;/p&gt;
description: Modified: 2025-09-30T07:41:10+02:00
DOI: 10.7910/dvn/vydboj
title: PDB - 3D85: IL-23 in complex with 7G10 antibody, random seed #2 (311K, 38°C, 100 ns)

description: PDB - 3D85: IL-23 in complex with 7G10 antibody, random seed #2 (311K, 38°C, 100 ns)
DOI: 10.17026/ar/yyjiqj
title: PAN-00170248 - open arm ring with undifferentiated terminals

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00170248&lt;/p&gt;
description: Modified: 2025-08-29T17:26:39+02:00
DOI: 10.15468/dl.nqpngz
title: Occurrence Download

description: A dataset containing 177574 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Country is one of (Canada, Mexico, United States of America)",
 "EventDate is greater than or equal to 2025-11-21",
 "EventDate is less than or equal to 2025-12-21",
 {
 "not" : {
 "Issue" : [
 "is one of (Basis of record invalid, Coordinate reprojection failed, Coordinate reprojection suspicious, Coordinate precision invalid, Coordinate uncertainty meters invalid, Country mismatch, Country invalid, Geodetic datum invalid, Presumed swapped coordinate, Presumed negated longitude, Presumed negated latitude, Country coordinate mismatch)"
 ]
 }
 },
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 177574 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0055666-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.30899941
title: Additional file 2 of Automating ACMG variant classifications with BIAS-2015 v2.1.1: algorithm analysis and benchmark against the FDA-approved eRepo dataset

description: Additional file 2.
DOI: 10.6084/m9.figshare.30899941.v1
title: Additional file 2 of Automating ACMG variant classifications with BIAS-2015 v2.1.1: algorithm analysis and benchmark against the FDA-approved eRepo dataset

description: Additional file 2.
DOI: 10.6084/m9.figshare.30899943
title: Additional file 1 of FtsZ contributes to cytoadhesion and interaction with host extracellular matrix components and plasminogen in Mycoplasma bovis

description: Additional file 1. Plasmids, oligonucleotides, cell lines and strains used in this study.
DOI: 10.6084/m9.figshare.30899943.v1
title: Additional file 1 of FtsZ contributes to cytoadhesion and interaction with host extracellular matrix components and plasminogen in Mycoplasma bovis

description: Additional file 1. Plasmids, oligonucleotides, cell lines and strains used in this study.
DOI: 10.6084/m9.figshare.30899946
title: Additional file 2 of FtsZ contributes to cytoadhesion and interaction with host extracellular matrix components and plasminogen in Mycoplasma bovis

description: Additional file 2. List of information of different M. bovis strains. Geographical location, collection date, host, isolation source and GenBank of different M. bovis.
DOI: 10.6084/m9.figshare.30899946.v1
title: Additional file 2 of FtsZ contributes to cytoadhesion and interaction with host extracellular matrix components and plasminogen in Mycoplasma bovis

description: Additional file 2. List of information of different M. bovis strains. Geographical location, collection date, host, isolation source and GenBank of different M. bovis.
DOI: 10.17026/dans-xey-86k3
title: PAN-00095297 - terra sigillata bowl type Drag. 29

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00095297&lt;/p&gt;
description: Modified: 2025-09-15T11:46:27+02:00
DOI: 10.6084/m9.figshare.30899967
title: Additional file 5 of Th17 cells/IL-17A shape Pasteurella multocida serotype A infection in murine and rabbit models

description: Additional file 5: Primer list.
DOI: 10.6084/m9.figshare.30899967.v1
title: Additional file 5 of Th17 cells/IL-17A shape Pasteurella multocida serotype A infection in murine and rabbit models

description: Additional file 5: Primer list.
DOI: 10.6084/m9.figshare.30899970
title: Additional file 6 of Th17 cells/IL-17A shape Pasteurella multocida serotype A infection in murine and rabbit models

description: Additional file 6: Raw RNA-seq data used in the study.
DOI: 10.6084/m9.figshare.30899970.v1
title: Additional file 6 of Th17 cells/IL-17A shape Pasteurella multocida serotype A infection in murine and rabbit models

description: Additional file 6: Raw RNA-seq data used in the study.
DOI: 10.6084/m9.figshare.29578726
title: Additional file 7 of Respiratory syncytial virus (RSV) enhances translation of virus-resembling AU-rich host transcripts

description: Supplementary Material 7: Supplementary Table S1. RNA-seq raw counts from this study, related to Fig. 2. Columns A-E contain gene information. Columns F-K mock-infected and columns L-Q RSV-infected raw counts. Total indicates total RNA and pol indicates polysome-associated RNA. Supplementary Table S2. DESeq2 normalized counts and DESeq2 differential expression for total RNA from this study, related to Fig. 2B. Columns A-E contain gene information. Columns F-K DESeq2 contain outputs for RSV/mock comparisons for total RNA. Columns L-Q contain normalized total counts. Supplementary Table S3. DESeq2 normalized counts and DESeq2 differential expression for polysome-associated RNA from this study, related to Fig. 2C. Columns A-E contain gene information. Columns F-K DESeq2 contain outputs for RSV/mock comparisons for polysome-associated RNA. Columns L-Q contain normalized polysome-associated counts. Supplementary Table S4. DESeq2 normalized counts and DESeq2 differential expression for translation efficiencies from this study, related to Fig. 2D. Columns A-E contain gene information. Columns F-K DESeq2 outputs for translation efficiency between RSV- and mock- infected cells. Columns L-Q normalized mock-infected counts and columns R-W normalized RSV-infected counts. Columns X-Y shows individual manually calculated TE for mock- and RSV-infected cells. Supplementary Table S5: GO analysis lists of differentially upregulated transcripts. Gene names of significantly upregulated total mRNAs, polysomal mRNAs and TE used for input files for GO analysis. TE: translation efficiency. Supplementary Table S6. DESeq2 differential expression for the translation efficiency data for mock and RSV infected samples from this study, related to Fig. 3. Columns A-D contain gene information. Columns E-I DESeq2 outputs for translation efficiency for mock-infected samples. Columns J-N DESeq2 outputs for translation efficiency for RSV-infected samples. Supplementary Table S7. DESeq2 differential expression for the translation efficiencydata for mock and VSV samples from [34], related to Fig. 4. Columns A-D contain gene information. Columns E-I DESeq2 outputs for translation efficiency for mock-infected samples. Columns J-N DESeq2 outputs for translation efficiency for VSV-infected samples. Supplementary Table S8. GC% and length data of MANE selected transcripts, related to Figs. 4 and 5. GC% and length for cDNA sequences, 5’-UTR, CDS and 3’-UTR. Transcripts were selected from the Matched Annotation from the NCBI and EMBL-EBI to obtain information for representative transcripts within the human transcriptome. Supplementary Table S9. Oligonucleotides used in this study. Related to Methods. List of oligos used for qRT-PCR.
DOI: 10.6084/m9.figshare.29578726.v1
title: Additional file 7 of Respiratory syncytial virus (RSV) enhances translation of virus-resembling AU-rich host transcripts

description: Supplementary Material 7: Supplementary Table S1. RNA-seq raw counts from this study, related to Fig. 2. Columns A-E contain gene information. Columns F-K mock-infected and columns L-Q RSV-infected raw counts. Total indicates total RNA and pol indicates polysome-associated RNA. Supplementary Table S2. DESeq2 normalized counts and DESeq2 differential expression for total RNA from this study, related to Fig. 2B. Columns A-E contain gene information. Columns F-K DESeq2 contain outputs for RSV/mock comparisons for total RNA. Columns L-Q contain normalized total counts. Supplementary Table S3. DESeq2 normalized counts and DESeq2 differential expression for polysome-associated RNA from this study, related to Fig. 2C. Columns A-E contain gene information. Columns F-K DESeq2 contain outputs for RSV/mock comparisons for polysome-associated RNA. Columns L-Q contain normalized polysome-associated counts. Supplementary Table S4. DESeq2 normalized counts and DESeq2 differential expression for translation efficiencies from this study, related to Fig. 2D. Columns A-E contain gene information. Columns F-K DESeq2 outputs for translation efficiency between RSV- and mock- infected cells. Columns L-Q normalized mock-infected counts and columns R-W normalized RSV-infected counts. Columns X-Y shows individual manually calculated TE for mock- and RSV-infected cells. Supplementary Table S5: GO analysis lists of differentially upregulated transcripts. Gene names of significantly upregulated total mRNAs, polysomal mRNAs and TE used for input files for GO analysis. TE: translation efficiency. Supplementary Table S6. DESeq2 differential expression for the translation efficiency data for mock and RSV infected samples from this study, related to Fig. 3. Columns A-D contain gene information. Columns E-I DESeq2 outputs for translation efficiency for mock-infected samples. Columns J-N DESeq2 outputs for translation efficiency for RSV-infected samples. Supplementary Table S7. DESeq2 differential expression for the translation efficiencydata for mock and VSV samples from [34], related to Fig. 4. Columns A-D contain gene information. Columns E-I DESeq2 outputs for translation efficiency for mock-infected samples. Columns J-N DESeq2 outputs for translation efficiency for VSV-infected samples. Supplementary Table S8. GC% and length data of MANE selected transcripts, related to Figs. 4 and 5. GC% and length for cDNA sequences, 5’-UTR, CDS and 3’-UTR. Transcripts were selected from the Matched Annotation from the NCBI and EMBL-EBI to obtain information for representative transcripts within the human transcriptome. Supplementary Table S9. Oligonucleotides used in this study. Related to Methods. List of oligos used for qRT-PCR.
DOI: 10.6084/m9.figshare.30899976
title: Additional file 2 of Repellent effects of insecticides against Aedes aegypti: a systematic review

description: Additional file 2. Dataset S1. Excel table of extracted data of selected manuscripts
DOI: 10.6084/m9.figshare.30899976.v1
title: Additional file 2 of Repellent effects of insecticides against Aedes aegypti: a systematic review

description: Additional file 2. Dataset S1. Excel table of extracted data of selected manuscripts
DOI: 10.6084/m9.figshare.30899983
title: Additional file 2 of Molecular phylogeny of the Acer-feeding aphid subfamily Drepanosiphinae (Insecta: Hemiptera: Aphididae) and the evolution of its endosymbiotic consortia

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.30899983.v1
title: Additional file 2 of Molecular phylogeny of the Acer-feeding aphid subfamily Drepanosiphinae (Insecta: Hemiptera: Aphididae) and the evolution of its endosymbiotic consortia

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.30899986
title: Additional file 3 of Molecular phylogeny of the Acer-feeding aphid subfamily Drepanosiphinae (Insecta: Hemiptera: Aphididae) and the evolution of its endosymbiotic consortia

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.30899986.v1
title: Additional file 3 of Molecular phylogeny of the Acer-feeding aphid subfamily Drepanosiphinae (Insecta: Hemiptera: Aphididae) and the evolution of its endosymbiotic consortia

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.30899989
title: Additional file 4 of Molecular phylogeny of the Acer-feeding aphid subfamily Drepanosiphinae (Insecta: Hemiptera: Aphididae) and the evolution of its endosymbiotic consortia

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.30899989.v1
title: Additional file 4 of Molecular phylogeny of the Acer-feeding aphid subfamily Drepanosiphinae (Insecta: Hemiptera: Aphididae) and the evolution of its endosymbiotic consortia

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.30900006
title: Additional file 2 of Epigenetic reprogramming drives endothelial dysfunction via neuropilin-1 in pulmonary hypertension

description: Supplementary Material 2.