cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.57745/jowzvy
title: Data_incubation_Moisture_La Cage.tab

description: Moisture treatments tested: WET represents a continuously wet scenario at pF 1.5 MWET a continuously moderated wet scenario at pF 2.5 DWC represents a dry-wet cycles scenario DRY a continuously dry scenario at pF 4.2. The agricultural practices in the Cage experiment: CON-LC represents the conventional agriculture; ORG represents the organic agriculture and CA represents the conservation agriculture.
DOI: 10.57745/regzjj
title: Data_incubation_Temperature_La Cage.tab

description: For temperature, the soils were incubated at either 20°C, 28°C and 35°C. All temperature treatments were maintained at the same moisture, i.e., pF 2.5.
DOI: 10.57745/rosxke
title: Data_incubation_Temperature_QualiAgro.tab

description: For temperature, the soils were incubated at either 20°C, 28°C and 35°C. All temperature treatments were maintained at the same moisture, i.e., pF 2.5.
DOI: 10.15468/dl.pnfbqj
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is CHAS Malacology Collection (Arctos)",
 "Country is Croatia"
 ]
}

 The dataset includes 16 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001593-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bed6re
title: Occurrence Download

description: A dataset containing 3634 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "DatasetKey is Dutch Vegetation Database",
 "Geometry POLYGON((5.64067 50.75677,6.00361 50.75677,6.00361 50.87636,5.64067 50.87636,5.64067 50.75677))",
 "HasGeospatialIssue is false",
 "Month is May",
 "TaxonKey is Rosales"
 ]
}

 The dataset includes 3634 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001592-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.e7ypg7
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Vascular plant collections of the Botanical Museum, University of Oulu (OULU)",
 "Country is Croatia"
 ]
}

 The dataset includes 46 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001594-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.3yt2u42m
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (249 records)
DOI: 10.15468/dl.9wpxav
title: Occurrence Download

description: A dataset containing 7180 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Bombus diversus Smith, 1869",
 "Country is Japan",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 1900"
 ]
}

 The dataset includes 7180 records from 23 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001595-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2uf3mf
title: Occurrence Download

description: A dataset containing 122 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Mozambique, Tanzania, United Republic of, Zimbabwe, Kenya, Malawi, South Africa)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Brackenridgea zanguebarica Oliv."
 ]
}

 The dataset includes 122 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001597-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15518603
title: Supplementary Data for: HTML Structure Exploration in 3D Software Cities

description: This artifact contains the evaluation results, a video, and a lightweight demo for the embedded web viewer and HTML visualization features in ExplorViz.
DOI: 10.5281/zenodo.15518604
title: Supplementary Data for: HTML Structure Exploration in 3D Software Cities

description: This artifact contains the evaluation results, a video, and a lightweight demo for the embedded web viewer and HTML visualization features in ExplorViz.
DOI: 10.15468/dl.ahu5cx
title: Occurrence Download

description: A dataset containing 93 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Naturalis Biodiversity Center (NL) - Lepidoptera",
 "Country is Croatia"
 ]
}

 The dataset includes 93 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001598-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h8fynf
title: Occurrence Download

description: A dataset containing 73 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Madagascar",
 "TaxonKey is Dalbergia bojeri Drake"
 ]
}

 The dataset includes 73 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001603-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.smqerv
title: Occurrence Download

description: A dataset containing 687 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Africa",
 "TaxonKey is Dalbergia boehmii Taub."
 ]
}

 The dataset includes 687 records from 50 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001599-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.asbefk
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "OccurrenceStatus is Present",
 "TaxonKey is Odontamblyopus rubicundus (Hamilton, 1822)",
 "Year 2000-2025"
 ]
}

 The dataset includes 11 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001600-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25921/v92s-y066
title: World Ocean Database data product series

description: The World Ocean Database (WOD) is the world's most comprehensive and largest collection of world wide in situ oceanographic measurements covering the time period 1772 to present (Mishonov et al. 2024, Garcia et al. 2024). The observations are in an uniform format, quality-controlled, and reproducible from the original data archived at NOAA's NCEI. The data in WOD are searchable via extensive granular metadata including quality control flags. The metadata preserves quality control flags added from data originators if available. Since its inception in 1994, WOD functions as an international FAIR-compliant data sharing resource by the broader global ocean and coastal communities. WOD has been an activity of the International Oceanographic Data and Information Exchange (IODE) as well as the World Data Service for Oceanography of the World Data System (WDS).

The WOD is continuously updated with new or updated data and metadata shared over time by 97 countries. As of December 2024, WOD includes ~3.6 billion observations collected on ~20.6 million casts with up to 27 profiles of the most commonly measured physical and chemical essential ocean variables and plankton. WOD includes in situ measurements of temperature, salinity (conductivity), dissolved oxygen, dissolved inorganic nutrients (phosphate, nitrate, nitrate + nitrite, nitrite, silicate), chlorophyll, alkalinity, pH, partial pressure of carbon dioxide, dissolved inorganic carbon, Tritium, Carbon-13, Carbon-14, Helium-3, Oxygen-18, chlorofluorocarbons (CFC-11, CFC-12, CFC-113), Argon, Helium, Neon, Transmissivity (Beam Attenuation Coefficient), and plankton. Casts include meteorological and sea state observations. The data are web and cloud accessible in interoperable formats including Climate and Forecast compliant ragged-array NetCDF. WOD enables multiuse of the global in situ oceanographic instrumental data record critical for quantifying ocean variability as well as in the development of value-added scientific and socioeconomic data products, information, and services.

The WOD consists of periodic major releases and quarterly updates to those releases. Each major release is associated with a concurrent release of a WOA release, and contains final quality control flags used in the corresponding WOA, which includes manual as well as automated steps. Each quarterly update release includes additional historical and recent data and preliminary quality control. The latest major release was WOD 2023 (WOD23), which includes more than 18.8 million oceanographic casts, from the second voyage of Captain Cook (1772) to the modern Argo floats (end of 2022).
DOI: 10.6084/m9.figshare.29147696
title: Planting Area Distribution of Early Rice in Sanya, Hainan Province, China from 2019 to 2024 (10 m)

description: In March 2022, the team conducted an in-depth survey of the distribution of paddy fields in Sanya. All members held handheld GPS devices and combined Google Map HD images to collect on-site data. After careful proofreading and visual interpretation, the data of 10,019.7 hectares of paddy fields were successfully collected. Following this investigation, in April 2024, I once again conducted field visits to the rice planting concentration areas in Yazhou District and Tianya District of Sanya, and obtained a total of 441 hectares of early rice planting area in 2024 in Sanya.Based on the above field survey data, this team developed a rice remote sensing recognition framework suitable for humid and cloudy areas. In this framework, rice growth-related vegetation index (NDVI, LSWI, NDWI) is integrated into the process of remote sensing image synthesis, and the midyear value of vegetation index is used as the quality band to eliminate the interference of cloud cover to a certain extent, and the commonly used image pixel median synthesis method is used to form four sets of rice image data in Sanya. Four sets of image data were combined with ResNet-34 deep learning model to build a rice planting area recognition model. Based on the rice planting distribution recognition model, the team used LSWI synthetic remote sensing image to inversion the planting area of early rice in Sanya, and the results were uploaded to the compressed package.
DOI: 10.15468/dl.9n6mtk
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Xeno-canto - Chiroptera sounds from around the world",
 "Country is Croatia"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001606-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.29149261
title: Antigenic peptide delivery to antigen-presenting cells using a CD40-coiled coil affinity-based platform

description: Delivery of antigenic peptides to antigen presenting cells (APCs) such as dendritic cells (DCs) using monoclonal antibodies (mAbs) is an attractive approach to evoke antigen-specific T cell activation and improve drug efficacy. Peptide linkage to mAbs has previously been achieved through genetic fusion, chemical conjugation, nano-engineered platforms and high affinity peptides. In this study, we have developed a flexible antibody-peptide linking technology using oppositely charged coiled coil domains to non-covalently link peptides to mAbs. The technology comprises (1) an anti-CD40 mAb connected with negatively charged E domains and (2) an immunogenic OVA peptide (SIINFEKL) from ovalbumin used as a model antigenic peptide fused with positively charged K domains. Combining these constructs leads to the formation of complexes that can be targeted to CD40 expressed on cells. Proof of concept antibody constructs connected with E domains generated from transient expressions exhibited good manufacturability, binding, and stability attributes comparable to a control mAb. Also, optimal repeat lengths for coiled-coil oligomerization domains were identified in these studies. Binding kinetics studies showed that connecting E domains to mAbs do not impede Fc gamma and neonatal receptor interactions. Additionally, formation of stable complexes capable of binding CD40 expressing cells was demonstrated <i>in vitro. In vivo</i> functionality evaluations showed that treatment of human CD40 transgenic mice with complexes elicited expansion of OVA peptide-specific CD8+ T cells and potent antitumor effects superior to peptide monotherapies. Overall, these findings demonstrate that the technology has great potential for application as an <i>in vivo</i> tool for antigenic peptide delivery.
DOI: 10.6084/m9.figshare.29149261.v1
title: Antigenic peptide delivery to antigen-presenting cells using a CD40-coiled coil affinity-based platform

description: Delivery of antigenic peptides to antigen presenting cells (APCs) such as dendritic cells (DCs) using monoclonal antibodies (mAbs) is an attractive approach to evoke antigen-specific T cell activation and improve drug efficacy. Peptide linkage to mAbs has previously been achieved through genetic fusion, chemical conjugation, nano-engineered platforms and high affinity peptides. In this study, we have developed a flexible antibody-peptide linking technology using oppositely charged coiled coil domains to non-covalently link peptides to mAbs. The technology comprises (1) an anti-CD40 mAb connected with negatively charged E domains and (2) an immunogenic OVA peptide (SIINFEKL) from ovalbumin used as a model antigenic peptide fused with positively charged K domains. Combining these constructs leads to the formation of complexes that can be targeted to CD40 expressed on cells. Proof of concept antibody constructs connected with E domains generated from transient expressions exhibited good manufacturability, binding, and stability attributes comparable to a control mAb. Also, optimal repeat lengths for coiled-coil oligomerization domains were identified in these studies. Binding kinetics studies showed that connecting E domains to mAbs do not impede Fc gamma and neonatal receptor interactions. Additionally, formation of stable complexes capable of binding CD40 expressing cells was demonstrated <i>in vitro. In vivo</i> functionality evaluations showed that treatment of human CD40 transgenic mice with complexes elicited expansion of OVA peptide-specific CD8+ T cells and potent antitumor effects superior to peptide monotherapies. Overall, these findings demonstrate that the technology has great potential for application as an <i>in vivo</i> tool for antigenic peptide delivery.
DOI: 10.15468/dl.57w7fz
title: Occurrence Download

description: A dataset containing 161 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Naturalis Biodiversity Center (NL) - Crustacea",
 "Country is Croatia"
 ]
}

 The dataset includes 161 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001607-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nrzvt3
title: Occurrence Download

description: A dataset containing 1365 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Urosphena squameiceps (Swinhoe, 1863)"
 ]
}

 The dataset includes 1365 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001601-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15129132
title: Data for the study: "Force and stress calculations with a neural-network wave function for solids"

description: This dataset contains the raw data and plotting code used in the study titled: "Force and stress calculations with a neural-network wave function for solids".

The relevant code is available at https://github.com/bytedance/netobs.

Data Files

Directory structure



deepsolid-force/: Data files for calculating forces.



Graphene/{X} contains training curves and forces by different estimators for 1x1x1 graphene cell, with one carbon atom stretched X angstroms.

LiH_TRI/{X} contains forces by different estimators for 1x1x1 LiH cell, with the hydrogen atom displaced along the diagonal line for X Bohr.

LiH_NU/{X} is similar to LiH_TRI/{X} but uses the NU feature instead of the TRI feature mentioned in the paper.



fs means the function f is using the triangular version and f0 means it's using the original version. Same for function g.





deepsolid-stress/: Data files for calculating stress



LiH/{X} contains pressure and stress data for 1x1x1 LiH cell with lattice constant equals to X angstrom.




File format

Raw force/stress data are stored in files named netobs_ckpt_xxxxxx.npz. Forces are stored in digest/force fields of the npz file and stresses are stored in values/value field.

The training curves are stored in train_stats.csv files.

Code for Plotting Figures



prep_data.py: Script to process data and create CSVs in digest/.



The easiest way to run it is using command uv run prep_data.py



plot.ipynb: Jupyter notebook for generating the plots.



The easiest way to run it is using command uvx --with numpy,pandas,lmfit,matplotlib,git+https://github.com/AllanChain/acplot jupyter lab plot.ipynb
DOI: 10.5281/zenodo.15129133
title: Data for the study: "Force and stress calculations with a neural-network wave function for solids"

description: This dataset contains the raw data and plotting code used in the study titled: "Force and stress calculations with a neural-network wave function for solids".

The relevant code is available at https://github.com/bytedance/netobs.

Data Files

Directory structure



deepsolid-force/: Data files for calculating forces.



Graphene/{X} contains training curves and forces by different estimators for 1x1x1 graphene cell, with one carbon atom stretched X angstroms.

LiH_TRI/{X} contains forces by different estimators for 1x1x1 LiH cell, with the hydrogen atom displaced along the diagonal line for X Bohr.

LiH_NU/{X} is similar to LiH_TRI/{X} but uses the NU feature instead of the TRI feature mentioned in the paper.



fs means the function f is using the triangular version and f0 means it's using the original version. Same for function g.





deepsolid-stress/: Data files for calculating stress



LiH/{X} contains pressure and stress data for 1x1x1 LiH cell with lattice constant equals to X angstrom.




File format

Raw force/stress data are stored in files named netobs_ckpt_xxxxxx.npz. Forces are stored in digest/force fields of the npz file and stresses are stored in values/value field.

The training curves are stored in train_stats.csv files.

Code for Plotting Figures



prep_data.py: Script to process data and create CSVs in digest/.



The easiest way to run it is using command uv run prep_data.py



plot.ipynb: Jupyter notebook for generating the plots.



The easiest way to run it is using command uvx --with numpy,pandas,lmfit,matplotlib,git+https://github.com/AllanChain/acplot jupyter lab plot.ipynb
DOI: 10.15468/dl.g7xqnp
title: Occurrence Download

description: A dataset containing 49349 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Mesopolobus elymi (Dzhanokmen, 1984), Gonatocerus californicus Girault, 1911, Eridontomerus laticornis (Forster, 1859), Tetramesa jonesi (Phillips, 1936), Tetramesa minuendum (Phillips, 1936), Tetramesa oregon (Phillips, 1936), Tetramesa hesperum (Phillips & Emery, 1919), Tetramesa gahani (Phillips, 1936), Tetramesa flavicoxa (Phillips, 1936), Tetramesa dakota (Phillips, 1936), Tetramesa ainsliei (Phillips, 1936), Paracentrobia americana (Girault, 1917), Eurytoma illinoisensis Girault, 1920, Bothriocraera flavipes Timberlake, 1916, Leptomeraporus nicaee (Walker, 1839), Stiropis nigrifrons (Kusnezov, 1929), Handianus potanini (Melichar, 1900), Kusnezoviella dimidiatifrons (Kusnezov, 1929), Mocuellus pseudagropyri Emeljanov, 1966, Eurybregma pseudagropyri Emeljanov, 1966, Macrosteles koreanus Kwon & Kwon, 2022, Mocuellus salsus Mitjaev, 2014, Mocuellus quadricornis Dlabola, 1949, Kusnezoviella antinoma Emeljanov, 1972, Phlebiastes ubsicus Emeljanov, 1972, Phlebiastes dzhungaricus Emeljanov, 1972, Phlebiastes altaicus (Vilbaste, 1965), Phlebiastes eurus Emeljanov, 1977, Psammotettix sabulicola (Curtis, 1837), Psammotettix koreanus (Matsumura, 1915), Phlebiastes dolniki (Emeljanov, 1964), Auridius ordinatus crocatus Hamilton, 1999, Tetramesa tobiasi Zerova, 2004, Moniliformis moniliformis (Bremser, 1811), Syzygium legatii Burtt Davy & Greenway, Panthera pardus (Linnaeus, 1758), Panthera tigris (Linnaeus, 1758), Wellcomia evoluta Linstow, 1899, Schizotetranychus montanae Tuttle & Baker, 1968, Oreochromis leucostictus (Trewavas, 1933), Neolucia hobartensis (Miskin, 1890), Taslopa montana Evans, 1942, Poecilasthena pulchraria (Doubleday, 1843), Mesodina halyzia (Hewitson, 1868), Xylocopa aeratus (Smith, 1851), Dirce solaris (Meyrick, 1890), Dirce lunaris (Meyrick, 1890), Castiarina dimidiata (Carter, 1908), Platurocypta punctum (Stannius, 1831), Arion ater (Linnaeus, 1758))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 49349 records from 438 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001604-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/2pxsc4f5kb
title: Salud sexual y reproductiva: Evaluación de un programa de intervención biopsicosocial en personas privadas de la libertad 

description: La salud sexual y salud reproductiva son derechos humanos universales y constituyen una parte fundamental del bienestar psicosocial de las personas en todo el mundo, por tanto, las garantías deben brindarse a la población en general sin ningún tipo de discriminación, barrera o privilegio de unos sobre otros, priorizando a las personas con diferentes grados de vulnerabilidad, como es el caso de la población privada de la libertad (PPL), que por sus condiciones de encierro y hacinamiento en gran parte de cárceles del país, se encuentran más proclives a situaciones de salud que afectan su integridad. Tal es el caso de los hombres privados de libertad, que por sus condiciones actuales requieren de una mayor y mejor orientación en asuntos relacionados con su sexualidad, dado que tienen muchas limitaciones, por ejemplo: falta de mayor acceso a educación en salud sexual y reproductiva, acceso al uso de fuentes de información través de internet, acceso a consultar profesionales para su salud física o mental entre otros. Se realizará una intervención sobre aspectos relacionados con VIH-Sida, comportamientos sexuales, actitudes hacia el uso del preservativo y se medirá con cuestionarios auto-administrables pre y pos, se pretende usar las pruebas de rangos con signo de Wilcoxon y/o T student para muestras relacionadas y el análisis de datos.