cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19178888.v2
title: The caspofungin paradoxical effect is a tolerant "Eagle effect" in the filamentous fungal pathogen Aspergillus fumigatus

description: Cell responses against antifungals different from resistance have been rarely studied in filamentous fungi, while terms such as tolerance and persistence are well-described for bacteria and increasingly examined in yeast-like organisms. <i>Aspergillus fumigatus </i>is a filamentous fungal pathogen that causes a disease named aspergillosis and caspofungin (CAS), a fungistatic drug, used as second-line therapy. Some <i>A. fumigatus </i>clinical isolates can survive and grow in CAS concentrations above the minimum effective concentration (MEC), a phenomenon known as “caspofungin paradoxical effect” (CPE). Here we evaluated the CPE in 67 <i>A. fumigatus </i>clinical isolates by calculating the Recovery Rate (RR) value, where isolates with RR ≥ 0.1 are considered CPE<sup>+</sup> while isolates with RR &lt; 0.1 are classified as CPE<sup>-</sup>. Conidia produced by three CPE<sup>+</sup> clinical isolates, CEA17 (RR=0.42), Af293 (RR=0.59), CM7555 (RR=0.38) all showed the ability to grow in high levels of CAS while all conidia produced by the CPE<sup>-</sup> isolate IFM61407 (RR=0.00) showed no evidence of paradoxical growth. Given the importance of calcium/calcineurin/transcription factor CrzA pathway in CPE regulation, we also demonstrated that all Δ<i>crzA</i><sup>CEA17</sup> (CPE<sup>+</sup>) conidia showed CPE while 100% of Δ<i>crzA</i><sup>Af293 </sup>(CPE<sup>-</sup>) were CPE<sup>-</sup>.<sup> </sup>As all spores derived from an individual strain were phenotypically indistinct with respect to CPE it is likely that CPE is a genetically encoded adaptive trait that should be considered an antifungal tolerant phenotype. As the RR parameter shows that the strength of the CPE is not uniform between strains, we propose that the mechanisms that govern this phenomenon are multi-factorial.<sup></sup> <b> </b>
DOI: 10.17632/2p97wjxrst
title: daraz_processed_tshirt_sales_data

description: The cleaned and processed dataset consists of 3,280 rows and 14 columns, capturing detailed t-shirt sales data from Daraz. The columns include product names, gender, color, sleeve type, material, combo items, prices, discounts, number of sales, reviews, seller locations, product links, IDs, and SKUs. This dataset provides insights into how various attributes like gender, color, material, and combo items influence pricing, sales volume, and customer reviews across different locations.
DOI: 10.17632/jxzgfw47wg
title: Data and Code for 'Machine-Learning the Skill of Mutual Fund Managers'

description: Data and Code for 'Machine-Learning the Skill of Mutual Fund Managers'
DOI: 10.6084/m9.figshare.12276854.v1
title: Additional file 3 of Alzheimer’s disease progression characterized by alterations in the molecular profiles and biogenesis of brain extracellular vesicles

description: Additional file 3.
DOI: 10.6084/m9.figshare.13140260.v1
title: [2018-5-8] Middle and Lower Impoundments Drone Orthomosaic, Digital Surface Model, and Processing Report

description: This is the drone orthomosaic, digital surface model (DSM), and PhotoScan-generated report for the May 8, 2018 sampling date for the Evans et al. Sawyer Mill dam removal study. This data is for the middle and lower impoundment study area on the Bellamy River in Dover, NH, USA. A DJI Phantom 3 Professional small unmanned aerial system was used to collect the aerial imagery. The imagery was processed in Agisoft PhotoScan Professional. A Topcon Hiper Lite+ was mainly used to collect the survey data. <br>The products' XY is in WGS 84, and the vertical datum corresponds to NAVD88 in meters. Please see Alexandra's dissertation (University of New Hampshire, 2021) for additional information on the drone products.<br><br>These materials were made using resources from an NSF EPSCoR funded project “RII Track-2 FEC: Strengthening the scientific basis for decision-making about dams: Multi-scale, coupled-systems research on ecological, social, and economic trade-offs” (a.k.a. "Future of Dams"). Support for this project is provided by the National Science Foundation’s Research Infrastructure Improvement NSF #IIA-1539071. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.
DOI: 10.6084/m9.figshare.1476267.v1
title: Financial Sustainability of UK Learned Societies - Analysis of 30 societies

description: This is the first of two datasets on the financial sustainability of learned societies, associated with the following publications: Research Information Network (2015), <em>Monitoring the Transition to Open Access: </em><em>A report for the Universities UK Open Access Co-ordination Group, </em>available at: http://www.researchinfonet.org/wp-content/uploads/2015/09/Full-report-FINAL-AS-PUBLISHED.pdf Johnson, R. and Fosci, M. (2015) "On shifting sands: assessing the financial sustainability of UK learned societies"<em>, Learned Publishing, </em>Volume 28, Number 4, October 2015, pp. 274-282 (9) DOI: http://dx.doi.org/10.1087/20150406
DOI: 10.6084/m9.figshare.13040474.v4
title: Code Review Histories of Gerrit (QT, Eclipse, Wireshark, LibreOffice) and GitHub (GitHub Desktop, VSCode, TensorFlow, Django) Projects

description: <i><b>Code Review Histories of Gerrit (QT, Eclipse, Wireshark, LibreOffice) and GitHub (GitHub Desktop, VSCode, TensorFlow, Django) Projects.</b></i><i><b><br></b></i><i><b>The data is fetched by using the tool: Perceval (https://github.com/chaoss/grimoirelab-perceval).<br></b></i><b><br></b>
DOI: 10.6084/m9.figshare.5124025.v1
title: Supplementary Material for: Correlated Evolution of Gonadotropin-Releasing Hormone and Gonadotropin-Inhibitory Hormone and Their Receptors in Mammals

description: <b><i>Background:</i></b> Evolutionary rate variation in genes (proteins) is manifested both within the species (genome) and between the species (genomes). However, the interdependent components of a biological system in form of a gene or a protein are expected to evolve in a correlated manner under a common functional constraint. <b><i>Methods:</i></b> The phylogenetic analysis and correlation analysis of gonadotropin-releasing hormone (GnRH) and gonadotropin-inhibitory hormone (GnIH) and their receptors (GnRHR and GnIHR) was conducted along with other control neuropeptides. <b><i>Results:</i></b> Both neuropeptides and their receptors regulating the reproductive neuroendocrine axis in vertebrates exhibited a correlated evolution under a common physiological constraint to regulate the release of gonadotropin. This result supports a coordinated substitution of amino acids in the GnRH and the GnIH neuropeptides along with their receptors in terms of similar evolutionary rates and distances with similar nucleotide composition of genes. <b><i>Conclusion:</i></b> This is the first demonstration of the correlated evolution of two components of an endocrine system regulating the release of gonadotropin which are acting in concert for successful reproduction.
DOI: 10.6084/m9.figshare.5882818.v3
title: Published research on flipped learning 2000-2018

description: This data set shows the number of peer-reviewed published articles from the ERIC database, with one of the terms "flipped learning", "flipped classroom", or "inverted classroom" in either the title or abstract. The data include works published between 2000 and 2018 inclusively.
DOI: 10.6084/m9.figshare.21454560.v1
title: Digital divide of urban and suburban vocational school teachers: Technology use for teaching

description: The data was collected for Vocational school teachers through survey
DOI: 10.6084/m9.figshare.24781737.v1
title: BiocharDS_V1.0.xlsx

description: A global dataset of biochar application effects on crop yield, soil properties, and greenhouse gas emissions
DOI: 10.6084/m9.figshare.25600707.v2
title: For peer review

description: The original data provided for the paper review.Plagiarism is prohibited.
DOI: 10.17632/hd7wtgs7dz
title: Data for: Competitive Neural Layer-based Method to Identify People with High Risk for Diabetic Foot

description: This file provides information from 250 diabetic patients. Each sample is composed of 54 variables with take into account information about self-care habits of patients in relation to their health, care with the feet, but also included the patient’s sociodemographic and socioeconomic information.  Rows are the variables and columns are the sample.
DOI: 10.18742/28228304.v1
title: Visual Summaries Of Congestion - Bus Open Data

description: Contains public sector information licensed under the Open Government Licence v3.0.This data has been collected from the bus open data service at https://www.bus-data.dft.gov.uk/It is released under version 3 of the Open Government License for public sector information and we publish the data here under these terms. The full license can be viewed at: https://www.nationalarchives.gov.uk/doc/open-government-licence/version/3/<br><br><br>
DOI: 10.6084/m9.figshare.10308275.v1
title: CONSORT 2010 Checklist.doc

description: checklist for the manuscript entitled 'How to promote discipine without tough-love during pregnancy'.<br>
DOI: 10.6084/m9.figshare.17049860.v1
title: LSSS_data file.xls

description: Life skills data <br>
DOI: 10.6084/m9.figshare.25894927.v2
title: Celloc_data

description: The preprocessed data for Celloc.
DOI: 10.6084/m9.figshare.3522587.v1
title: Appendix B. Tables presenting simulation results.

description: Tables presenting simulation results.
DOI: 10.6084/m9.figshare.20417445.v1
title: Transcriptomic heterochrony and completely cleistogamous flower development in the mycoheterotrophic orchid Gastrodia

description: <strong>Dataset on "Transcriptomic heterochrony and completely cleistogamous flower development in the mycoheterotrophic orchid </strong><em><strong>Gastrodia"</strong></em>
DOI: 10.6084/m9.figshare.24305635.v1
title: Dataset for 'Cs<sub>3</sub>Bi<sub>2</sub>Br<sub>9</sub>/g-C<sub>3</sub>N<sub>4</sub> direct Z-scheme heterojunction for enhanced photocatalytic reduction of CO<sub>2 </sub>to CO'

description: Dataset for 'Cs<sub>3</sub>Bi<sub>2</sub>Br<sub>9</sub>/g-C<sub>3</sub>N<sub>4</sub> direct Z-scheme heterojunction for enhanced photocatalytic reduction of CO<sub>2 </sub>to CO'Details in the open access Chemistry of Materials article
DOI: 10.6084/m9.figshare.25309039.v2
title: The dataset of 'The influence of Wind and Wave on Saltwater Intrusion in the Yangtze Estuary: A numerical Modeling Study'

description: This dataset includes the data used in 'The influence of Wind and Wave on Saltwater Intrusion in the Yangtze Estuary: A numerical Modeling Study'
DOI: 10.17632/823tckxwtm
title: Basic patches on the E2 glycoprotein of eastern equine encephalitis virus influence viral vascular clearance and dissemination

description: Abstract: Previously we found SINV-EEEV particles can be removed from the murine blood circulation in a phagocyte-dependent manner which can be disrupted by either transient depletion of vascular heparan sulfate glycosaminoglycans (GAG) or mutation of the viral E2 glycoprotein (K71/74/77A) associated with decreased GAG binding in vitro. Here, we further investigate the viral determinants of EEEV vascular clearance and evaluate their role in viremia development. We identified two large basic patches on the EEEV E2 glycoprotein which contain two known GAG-binding sites (K71/74/77 and K156/R157) and six additional basic residues (K10, R13, K56, R152, K231, and K232). We find that disruption of either basic patch by single alanine substitutions promotes prolonged retention of SINV-EEEV particles in the murine blood circulation in an experimental viremia model. Furthermore, like the attenuated K71/74/77A mutant, we observed the K156/R157A, K10A, and K231A mutations are also associated with similar enhanced viral dissemination in a mouse infection model as the attenuated K71/74/77A mutant. Surprisingly, despite known differences in GAG-binding and potential alteration in receptor interactions, we find the initial dispersal of WT and mutant SINV-EEEV virions from the inoculation site to the draining lymph node to be equivalent at 1 hour post-subcutaneous inoculation. Moreover, our data suggests the higher viremia associated with mutation of the E2 basic patches may be attributed to evasion of viremic control by blood-filtering phagocytes. Overall, this study defines viral features of the EEEV E2 glycoprotein that influence tissue-specific viral dissemination and highlights the capacity of blood-filtering phagocytes to modulate EEEV viremia.

Data description: Datasets are qPCR results quantifying viral genomes in each sample. For each sample, RNA was extracted and used to generated cDNA; the cDNA was analyzed by TaqMan qPCR against a standard curve for quantification.
DOI: 10.17632/8dvcsvnf6p
title: Metabolome Data 20240131

description: Metabolome Data of human skin surface
DOI: 10.17632/96w9wxp42w
title: 2022 design of unit cell with Negative Poisson's ratio

description: Stl data of the unit cell with negative poisson's ratio. The detail of the design method is discussed in the paper:
DOI: 10.17632/t3y4tk5pvc
title: Literature review text mining codes (Topic modeling, word cloud, and clustered heatmaps) and sample data

description: This is a share if you want to perform text mining based topic analysis of academic literature using Latent Dirichlet Allocation (LDA) , work cloud analysis and k-mean clustering.
DOI: 10.25420/britishmuseum.28944992.v1
title: 2019SG01 Project Metadata

description: Metadata spreadsheet with all the metadata information for the assets uploaded in project 2019SG01 following the Material Culture Ethnography Metadata Schema (MCEMS), which was developed for the Endangered Material Knowledge Programme (EMKP). MCEMS is intended to record the metadata for digital objects that were created as part of ethnographic research recording material culture, living heritage, cultural practices, and different forms of knowledge. Its aim is to aid the preservation of ethnography-specific information, facilitate archiving for future re-use and accessibility, and increase the online findability and presence of ethnographic data and research.
DOI: 10.6084/m9.figshare.27288255.v1
title: Conifer phyllosphere MAGs

description: phyllosphere MAGs from conifer needles
DOI: 10.17632/7vxdwfb74t
title: Railway Signal Passed At Danger: Bibliometric Dataset

description: Signal Passed At Danger: Bibliometric Dataset
DOI: 10.17632/8w56ksmk7j
title: Code: Ultra-power-dense heat exchanger development through genetic algorithm design and additive manufacturing

description: This code was used for shape optimization for "Ultra-power-dense heat exchanger development through genetic algorithm design and additive manufacturing," by Hyunkyu Moon, Davis J. McGregor, Nenad Miljkovic, and William P. King
DOI: 10.17632/mpj7r7m3dj
title: Economic and non-economic impact of digital transformation on enterprise competitiveness: Evidence from Chinese listed companies

description: The dataset includes comprehensive data collected from 2979 Chinese A-share listed companies spanning the period from 2011 to 2022. It comprises detailed financial metrics, market performance indicators, and non-economic competitiveness measures such as social responsibility and governance ratings. The dataset encompasses variables related to digital transformation initiatives, ownership structure, industry sector classifications, and market concentration levels. The research data mainly comes from CSMAR database and Huazheng ESG rating database. The data can be found from https://data.csmar.com/ and https://www.chindices.com/index.html. This dataset is valuable for researchers examining the impact of digital transformation on enterprise competitiveness across diverse economic contexts.
DOI: 10.6084/m9.figshare.17869859.v1
title: Seurat object for the spatial transcriptomic data of sample HCM1267D

description: Seurat object for the spatial transcriptomic data of sample HCM1267D
DOI: 10.17632/5pd9c57xfj
title: Journal of Iran's Economic Essays; "Jostarhaye Eghtesadiye Iran; No. 31

description: The Journal publishes papers, including the following fields:

- Islamic economics and finance;

 - Iran's economy;

 - Fiqh (Islamic jurisprudence) and economics;

 - Philosophy of economics;

 - Economic theory;

 - Ethics;

- Islamic economic institutions

 - Islamic banking;

 - Economic development;

- Social security.
DOI: 10.6084/m9.figshare.11541615.v1
title: The National Map as Knowledge Base

description: Powerpoint slides describing factors of linked data, geographic information system, and cartographic integration. This presentation was given at the Earth Science Information Partners (ESIP) Winter Meeting held in Bethesda, MD in January 2020.<br>
DOI: 10.6084/m9.figshare.17185574.v1
title: Original truth sets for simulated and mock samples

description: Known sample compositions for all simulated and mock samples used, as provided by the previous publications.
DOI: 10.6084/m9.figshare.25550063.v1
title: Concentration Dependence of Molecular Species by Linear Deconvolution of Absolute TR-WAXS data

description: Data represented as dots in Figure 5 of the article. Useful as input to reproduce the kinetic analysis proposed in the study using SimBiology.
DOI: 10.6084/m9.figshare.7148078.v1
title: Lifetime dataset: single concept deviations

description: The single concept means and standard deviations of annual prevalence from the lifetime data set. File format: tab-delimited table; carriage return & newline terminated. Columns: concept id - Unique numeric code identifying the concept; mean - The mean of the annual prevalence (1.0 = 100%); std - The standard deviation of the annual prevalence. The rows are arranged in ascending order by concept id.
DOI: 10.6084/m9.figshare.12756473.v1
title: mRNA.mat

description: The mRNA expression of 11128 caner patients from TCGA
DOI: 10.6084/m9.figshare.19623480.v1
title: COMSOL Files: Unification of independent design variables

description: This is the collection of COMSOL Multiphysics 5.4 files in order to reproduce the data shown in submitted manuscript.
DOI: 10.6084/m9.figshare.19773586.v1
title: Coupling effects of the sum-frequency process and difference-frequency process on upconversion terahertz-wave detection via a DAST crystal: Dataset

description: This Dataset contains simulated results and experimental data in the paper: Coupling effects of the sum-frequency process and difference-frequency process on upconversion terahertz-wave detection via a DAST crystal.
DOI: 10.6084/m9.figshare.21896007.v1
title: Data and Code_ <strong>Accounting for bias in prevalence estimation: the case of a globally emerging pathogen</strong>

description: One file is the raw data containing the identity and qPCR results of all <em>Rhinerderma darwinii</em> individuals captured in our study. Zoospore equivalents (Bd infection load) are not yet corrected for dilution (See code to preprocess the data) <br> The other is the code used to run the models, remove pseudoreplicates and draw figures.
DOI: 10.6084/m9.figshare.22140275.v1
title: Microshear bond strength Raw Data

description: Microshear Bond strength raw data
DOI: 10.6084/m9.figshare.24877770.v3
title: EEG dataset of repeated measurements from single-individual

description: In current dataset, we provide a healthy, 39 years old male who completed a total of 60 times EEG and ECG measurement in the past three months. After the EEG recording was completed, magnetic resonance image was also collected.
DOI: 10.6084/m9.figshare.8194646.v1
title: Efficacy of hyperthermic intraperitoneal chemotherapy in patients with epithelial ovarian cancer: a meta-analysis

description: <b>Objective:</b> The role of hyperthermic intraperitoneal chemotherapy (HIPEC) in epithelial ovarian cancer (EOC) is still controversial. Present analysis aims to evaluate the survival benefit of HIPEC in treatment of EOC patients. <b>Methods:</b> Articles related to ‘HIPEC’ and ‘ovarian cancer’ were comprehensively searched in four databases (PubMed, EMBASE, MEDLINE and Cochrane Library) up to 4 February 2018. Eligible studies were identified depending on the selection criteria. The survival outcome and adverse events were collected. The relationship between HIPEC and survival of EOC was assessed using random-effects models. <b>Results:</b> A total of 1464 patients from 17 trials were subjected to analysis. The pooled results showed that HIPEC significantly improved overall survival (OS, HR = 0.50, 95% CI 0.36–0.69; <i>p</i> = 0.000) and progression-free survival (PFS, HR = 0.57, 95% CI 0.47–0.69; <i>p</i> = 0.000) among EOC patients when compared with no HIPEC controls. Similar results were observed in each year rate of survival. Subgroup analysis didn’t lead to the opposite results, except no significant increased 1-year of OS in primary EOC and 1- and 2-year of PFS in recurrent EOC treated with HIPEC were observed. No significant difference existed in the adverse events and mortality between HIPEC and no HIPEC. <b>Conclusions:</b> HIPEC is associated with improved OS and PFS in both primary and recurrent EOC. However, no significant increased 1- and 2-year of PFS were reached in recurrent EOC treated with HIPEC. Further prospective randomized controlled trials are warranted.
DOI: 10.17632/whksj6f7bd
title: Thermo-mechanical responses of the Human molar tooth

description: The thermo-mechanical responses of the human molar tooth have been analysed. A finite element method-based packaged software has been used. The data related to the result of the manuscript are attached here.
DOI: 10.6084/m9.figshare.1619960.v2
title: nd2reader 2.0.0

description: Pure Python library for reading NIS Elements ND2 images and metadata
DOI: 10.6084/m9.figshare.28436618.v1
title: <b>Fruit instance segmentation dataset for </b><b>YOLOvFIS network</b>

description: The fruit dataset includes 11546 images. [Train: 10134, Valid: 947, Test: 465]Class: bitter_melon, cucumber, fig, jujube, melon_boyang, muskmelonFruit are annotated in YOLOv8 format.The following pre-processing was applied to each image:The following augmentation was applied to create 3 versions of each source image:* Equal probability of one of the following 90-degree rotations: none, clockwise, counter-clockwise, upside-down* Random rotation of between -15 and +15 degrees* Random shear of between -10° to +10° horizontally and -10° to +10° vertically* Random exposure adjustment of between -10 and +10 percent* Salt and pepper noise was applied to 0.1 percent of pixels