cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25592/uhhfdm.1445
title: DUFDE

description: Video recordings of seven German/French simultaneous bilingual children, starting at approx. 1 year and 6 months. One or two recordings eachmonth until approx. 5 years and 6 months (and some later recordings for some subjects). In each recording session (interviewer/child interaction) the child is addressed in both languages in one French and one German part. For privacy protection reasons, only the transcripts can be made available. Video recordings cannot be published. Meisel, Jürgen (ed.) (1994): Bilingual First Language Acquistion: French and German Grammatical Development (Language Acquisition & Language Disorders). Amsterdam: John Benjamins.
DOI: 10.6084/m9.figshare.12847631
title: R0186_20170829a_videos

description: Rat 0186, skilled reaching data collected on 8/29/2017 in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12844663
title: A new platanistoid, <i>Perditicetus yaconensis</i> gen. et sp. nov. (Cetacea, Odontoceti), from the Chattian–Aquitanian Nye Formation of Oregon

description: The Platanistoidea is a large superfamily of odontocetes whose sole surviving member is <i>Platanista gangetica</i>, the Ganges river dolphin. Despite the diversity of the Platanistoidea, it remains poorly understood and in need of revision. As one of the earliest-diverging clade of crown odontocetes, understanding their distribution, morphology, and phylogeny is crucial to understanding the radiation of archaic odontocetes in the late Oligocene to the middle Miocene. Here we describe an archaic odontocete, named <i>Perditicetus yaconensis</i>, gen. et. sp. nov., from the latest Oligocene–earliest Miocene Nye Formation in Oregon. <i>Perditicetus yaconensis</i>, represented by the holotype USNM 335224, possesses several synapomorphies of the Platanistoidea. Intriguingly, strong morphological similarities exist between <i>P. yaconensis</i> and other archaic odontocetes in the ‘<i>Chilcacetus</i> clade’ especially in the vertex and pterygoid region. However, the results of our phylogenetic analyses failed to capture any phylogenetic relationships between <i>Perditicetus</i> and <i>Chilcacetus</i>. In this analysis, <i>P. yaconensis</i> is sister taxon to the clade Allodelphinidae + Squalodelphinidae + Platanistidae and we consider that <i>P. yaconensis</i> is one of the basal-most derived platanistoids. The type locality of the holotype specimen, in the Nye Formation, provides a window into the diversity of archaic odontocetes, especially platanistoids, during the latest Oligocene to earliest Miocene. http://zoobank.org/urn:lsid:zoobank.org:pub:9B370DA2-8035-4A12-929C-D8FCA84438AE
DOI: 10.6084/m9.figshare.12844663.v1
title: A new platanistoid, <i>Perditicetus yaconensis</i> gen. et sp. nov. (Cetacea, Odontoceti), from the Chattian–Aquitanian Nye Formation of Oregon

description: The Platanistoidea is a large superfamily of odontocetes whose sole surviving member is <i>Platanista gangetica</i>, the Ganges river dolphin. Despite the diversity of the Platanistoidea, it remains poorly understood and in need of revision. As one of the earliest-diverging clade of crown odontocetes, understanding their distribution, morphology, and phylogeny is crucial to understanding the radiation of archaic odontocetes in the late Oligocene to the middle Miocene. Here we describe an archaic odontocete, named <i>Perditicetus yaconensis</i>, gen. et. sp. nov., from the latest Oligocene–earliest Miocene Nye Formation in Oregon. <i>Perditicetus yaconensis</i>, represented by the holotype USNM 335224, possesses several synapomorphies of the Platanistoidea. Intriguingly, strong morphological similarities exist between <i>P. yaconensis</i> and other archaic odontocetes in the ‘<i>Chilcacetus</i> clade’ especially in the vertex and pterygoid region. However, the results of our phylogenetic analyses failed to capture any phylogenetic relationships between <i>Perditicetus</i> and <i>Chilcacetus</i>. In this analysis, <i>P. yaconensis</i> is sister taxon to the clade Allodelphinidae + Squalodelphinidae + Platanistidae and we consider that <i>P. yaconensis</i> is one of the basal-most derived platanistoids. The type locality of the holotype specimen, in the Nye Formation, provides a window into the diversity of archaic odontocetes, especially platanistoids, during the latest Oligocene to earliest Miocene. http://zoobank.org/urn:lsid:zoobank.org:pub:9B370DA2-8035-4A12-929C-D8FCA84438AE
DOI: 10.6084/m9.figshare.12844660
title: A new species of glyptodontine (Mammalia, Xenarthra, Glyptodontidae) from the Quaternary of the Eastern Cordillera, Bolivia: phylogeny and palaeobiogeography

description: Xenarthrans constitute a relict clade of endemic South American placental mammals with a long evolutionary history starting, at least, in the early Eocene. Within Xenarthra, Glyptodontidae (late Eocene–earliest Holocene) was a conspicuous group of large-sized armoured herbivores. During the Pleistocene (<i>ca</i>. 2.6–0.001 Ma) several genera (e.g. <i>Panochthus</i> and <i>Glyptodon</i>) achieved a remarkable latitudinal distribution in South America, as members of one of the xenarthran groups that participated in the Great American Biotic Interchange. Knowledge of the evolutionary history of this clade in some areas remains poorly known, especially in the high elevation Andean and sub-Andean regions of South America. Here we describe a new species, <i>Glyptodon jatunkhirkhi</i> sp. nov., from several localities of the Eastern Cordillera in Bolivia (<i>ca</i>. 2500–4100 m above sea level). From a phylogenetic viewpoint this new taxon appears as the sister group of the two lowland species recorded in southern South America (<i>Glyptodon munizi</i> + <i>G. reticulatus</i>), and this is congruent with the morphological differences observed between both clades, mainly with respect to the general morphology of the dorsal carapace and the skull. This new species expands the complex biogeographical scenario for Pleistocene glyptodonts and highlights the importance of Andean areas as key in understanding the evolutionary history of this clade. According to this revision, the diversity of <i>Glyptodon</i> is limited to <i>G. munizi</i> and <i>G. reticulatus</i> (two chronologically successive lowland species) plus this new species. The genera <i>Panochthus</i> (<i>P. hipsilis</i>) and <i>Glyptodon</i> seem to be the only Pleistocene glyptodonts to have been adapted to high elevation environments. http://zoobank.org/urn:lsid:zoobank.org:pub:7B5EFC11-626A-4BB5-8A00-DF657741698C
DOI: 10.6084/m9.figshare.12844660.v1
title: A new species of glyptodontine (Mammalia, Xenarthra, Glyptodontidae) from the Quaternary of the Eastern Cordillera, Bolivia: phylogeny and palaeobiogeography

description: Xenarthrans constitute a relict clade of endemic South American placental mammals with a long evolutionary history starting, at least, in the early Eocene. Within Xenarthra, Glyptodontidae (late Eocene–earliest Holocene) was a conspicuous group of large-sized armoured herbivores. During the Pleistocene (<i>ca</i>. 2.6–0.001 Ma) several genera (e.g. <i>Panochthus</i> and <i>Glyptodon</i>) achieved a remarkable latitudinal distribution in South America, as members of one of the xenarthran groups that participated in the Great American Biotic Interchange. Knowledge of the evolutionary history of this clade in some areas remains poorly known, especially in the high elevation Andean and sub-Andean regions of South America. Here we describe a new species, <i>Glyptodon jatunkhirkhi</i> sp. nov., from several localities of the Eastern Cordillera in Bolivia (<i>ca</i>. 2500–4100 m above sea level). From a phylogenetic viewpoint this new taxon appears as the sister group of the two lowland species recorded in southern South America (<i>Glyptodon munizi</i> + <i>G. reticulatus</i>), and this is congruent with the morphological differences observed between both clades, mainly with respect to the general morphology of the dorsal carapace and the skull. This new species expands the complex biogeographical scenario for Pleistocene glyptodonts and highlights the importance of Andean areas as key in understanding the evolutionary history of this clade. According to this revision, the diversity of <i>Glyptodon</i> is limited to <i>G. munizi</i> and <i>G. reticulatus</i> (two chronologically successive lowland species) plus this new species. The genera <i>Panochthus</i> (<i>P. hipsilis</i>) and <i>Glyptodon</i> seem to be the only Pleistocene glyptodonts to have been adapted to high elevation environments. http://zoobank.org/urn:lsid:zoobank.org:pub:7B5EFC11-626A-4BB5-8A00-DF657741698C
DOI: 10.6084/m9.figshare.12854484
title: ‘Yati’ – Decorative mathematical patterns in Carnatic music

description: ‘Yati’ – Decorative mathematical patterns in Carnatic music
DOI: 10.6084/m9.figshare.12854484.v1
title: ‘Yati’ – Decorative mathematical patterns in Carnatic music

description: ‘Yati’ – Decorative mathematical patterns in Carnatic music
DOI: 10.5281/zenodo.3997184
title: Lipid17ecc POPC:POPG 4:1 bilayer simulation in 1 M CaCl2 solution and Na+ counter ions

description: Lipid17ecc POPC:POPG 4:1 bilayer simulation in 1 M CaCl2 solution. The initial structure was taken from https://zenodo.org/record/3874378#.X0OfthmEZGF . Temperature is 298 K. The system contains 350 POPC, 88 POPG, 88 Na+ ions, 24840 SPCE water molecules, 475 Ca2+ ions and 950 Cl- ions Total length of simulation is 400 ns. First 100 ns were discarded as equilibration time. Saving frequency of 100-300ns.xtc is 20 ps.
DOI: 10.34740/kaggle/ds/202248
title: WebScreenshots
DOI: 10.6084/m9.figshare.12854589.v1
title: Insights into the primary radiation damage of silicon by a machine learning interatomic potential

description: We develop a silicon Gaussian approximation machine learning potential suitable for radiation effects, and use it for the first <i>ab initio</i> simulation of primary damage and evolution of collision cascades. The model reliability is confirmed by good reproduction of experimentally measured threshold displacement energies and sputtering yields. We find that clustering and recrystallization of radiation-induced defects, propagation pattern of cascades, and coordination defects in the heat spike phase show striking differences to the widely used analytical potentials. The results reveal that small defect clusters are predominant and show new defect structures such as a vacancy surrounded by three interstitials. Quantum-mechanical level of accuracy in simulation of primary damage was achieved by a silicon machine learning potential. The results show quantitative and qualitative differences from the damage predicted by any previous models.
DOI: 10.6084/m9.figshare.12854589.v3
title: Insights into the primary radiation damage of silicon by a machine learning interatomic potential

description: We develop a silicon Gaussian approximation machine learning potential suitable for radiation effects, and use it for the first <i>ab initio</i> simulation of primary damage and evolution of collision cascades. The model reliability is confirmed by good reproduction of experimentally measured threshold displacement energies and sputtering yields. We find that clustering and recrystallization of radiation-induced defects, propagation pattern of cascades, and coordination defects in the heat spike phase show striking differences to the widely used analytical potentials. The results reveal that small defect clusters are predominant and show new defect structures such as a vacancy surrounded by three interstitials. Quantum-mechanical level of accuracy in simulation of primary damage was achieved by a silicon machine learning potential. The results show quantitative and qualitative differences from the damage predicted by any previous models.
DOI: 10.6084/m9.figshare.12854589.v2
title: Insights into the primary radiation damage of silicon by a machine learning interatomic potential

description: We develop a silicon Gaussian approximation machine learning potential suitable for radiation effects, and use it for the first <i>ab initio</i> simulation of primary damage and evolution of collision cascades. The model reliability is confirmed by good reproduction of experimentally measured threshold displacement energies and sputtering yields. We find that clustering and recrystallization of radiation-induced defects, propagation pattern of cascades, and coordination defects in the heat spike phase show striking differences to the widely used analytical potentials. The results reveal that small defect clusters are predominant and show new defect structures such as a vacancy surrounded by three interstitials. Quantum-mechanical level of accuracy in simulation of primary damage was achieved by a silicon machine learning potential. The results show quantitative and qualitative differences from the damage predicted by any previous models.
DOI: 10.6084/m9.figshare.12854607.v1
title: The First Finding of the Lichen <i>Solorina saccata</i> at an Algific Talus Slope in Korea

description: An algific talus slope is composed of broken rocks with vents connected to an ice cave, releasing cool air in summer and relatively warmer air in winter to maintain a more stable microclimate all year round. Such geological features create a very unusual and delicate ecosystem. Although there are around 25 major algific talus slopes in Korea, lichen ecology of these areas had not been investigated to date. In this study, we report the first exploration of lichen diversity and ecology at an algific talus slope, Jangyeol-ri, in Korea. A total of 37 specimens were collected over 2017–2018. Morphological and sequencing analysis revealed 27 species belonging to 18 genera present in the area. Of particular interest among these species was <i>Solorina saccata</i>, as it has previously not been reported in Korea and most members of genus <i>Solorina</i> are known to inhabit alpine regions of the Northern Hemisphere. We provide here a taxonomic key for <i>S. saccata</i> alongside molecular phylogenetic analyses and prediction of potential habitats in South Korea. Furthermore, regions in South Korea potentially suitable for <i>Solorina</i> spp. were predicted based on climatic features of known habitats around the globe. Our results showed that the suitable areas are mostly at high altitudes in mountainous areas where the annual temperature range does not exceed 26.6 °C. Further survey of other environmental conditions determining the suitability of <i>Solorina</i> spp. should lead to a more precise prediction of suitable habitats and trace the origin of <i>Solorina</i> spp. in Korea.
DOI: 10.6084/m9.figshare.12854610.v2
title: A new species of <i>Phrynobatrachus</i> (Amphibia: Anura: Phrynobatrachidae) from the Northern Mountains of Tanzania

description: Using integrative approaches, a new large-bodied species of <i>Phrynobatrachus</i> is described from a series of 48 specimens from the montane forests of the West Usambara and North Pare Mountains of Tanzania. The most distinguishing morphological feature separating <i>Phrynobatrachus ambanguluensis</i> sp. nov from similar species is the markedly overhanging and pointed upper jaw and snout. Mitochondrial 16S rRNA indicates that the new species differs from all other species with published sequence data by a minimum distance of 4.75% and is sister to <i>P. krefftii</i>, with which it has been confused in the past. The new species is known from two forest reserves and is of high conservation concern given these areas are highly impacted by anthropogenic change. http://www.zoobank.org/urn:lsid:zoobank.org:pub:E0C82A87-47A5-426B-978D-96D27FA7A3B7
DOI: 10.6084/m9.figshare.12854610.v1
title: A new species of <i>Phrynobatrachus</i> (Amphibia: Anura: Phrynobatrachidae) from the Northern Mountains of Tanzania

description: Using integrative approaches, a new large-bodied species of <i>Phrynobatrachus</i> is described from a series of 48 specimens from the montane forests of the West Usambara and North Pare Mountains of Tanzania. The most distinguishing morphological feature separating <i>Phrynobatrachus ambanguluensis</i> sp. nov from similar species is the markedly overhanging and pointed upper jaw and snout. Mitochondrial 16S rRNA indicates that the new species differs from all other species with published sequence data by a minimum distance of 4.75% and is sister to <i>P. krefftii</i>, with which it has been confused in the past. The new species is known from two forest reserves and is of high conservation concern given these areas are highly impacted by anthropogenic change. http://www.zoobank.org/urn:lsid:zoobank.org:pub:E0C82A87-47A5-426B-978D-96D27FA7A3B7
DOI: 10.6084/m9.figshare.12853019
title: Plastid dataset for phylogenetic reconstruction of ferns

description: this is a plastid protein coding gene data set of 82 ferns using concatenation of 75 conserved plastid genes
DOI: 10.5517/ccdc.csd.cc1yz8t0
title: CCDC 1816563: Experimental Crystal Structure Determination

description: Related Article: Thomais G. Tziotzi, Evangelos K. Andreou, Eirini Tzanetou, Dimitris A. Kalofolias, Daniel J. Cutler, Marek Weselski, Milosz Siczek, Tadeusz Lis, Euan K. Brechin, Constantinos J. Milios|2020|Dalton Trans.|49|10339|doi:10.1039/D0DT01916J
DOI: 10.5517/ccdc.csd.cc25557s
title: CCDC 2000964: Experimental Crystal Structure Determination

description: Related Article: Irina N. Meshcheryakova, Andrei S. Shavyrin, Olesya Yu Trofimova, Anton V. Cherkasov, Georgy K. Fukin, Alexandr V. Piskunov|2020|J.Mol.Struct.|1220|128734|doi:10.1016/j.molstruc.2020.128734
DOI: 10.5517/ccdc.csd.cc2434l0
title: CCDC 1969231: Experimental Crystal Structure Determination

description: Related Article: Wei-Xiao Guo, Yuan-Yuan Wang, Xiao-Lu Hu, Qi Yue, En-Qing Gao|2020|Cryst.Growth Des.|20|5072|doi:10.1021/acs.cgd.0c00265
DOI: 10.5517/ccdc.csd.cc2434q4
title: CCDC 1969235: Experimental Crystal Structure Determination

description: Related Article: Wei-Xiao Guo, Yuan-Yuan Wang, Xiao-Lu Hu, Qi Yue, En-Qing Gao|2020|Cryst.Growth Des.|20|5072|doi:10.1021/acs.cgd.0c00265
DOI: 10.5517/ccdc.csd.cc2434r5
title: CCDC 1969236: Experimental Crystal Structure Determination

description: Related Article: Wei-Xiao Guo, Yuan-Yuan Wang, Xiao-Lu Hu, Qi Yue, En-Qing Gao|2020|Cryst.Growth Des.|20|5072|doi:10.1021/acs.cgd.0c00265
DOI: 10.6084/m9.figshare.12854723
title: Analysis of the conservation status of New Zealand freshwater invertebrates: temporal changes, knowledge gaps, impediments, and management implications

description: The 2018 conservation status assessment of freshwater invertebrate taxa was the most comprehensive to date. Of the <i>Threatened</i> and <i>At Risk</i> taxa in 2018 (177 taxa), 48 were listed as <i>Nationally Critical</i>, 14 as <i>Nationally Endangered</i>, 16 as <i>Nationally Vulnerable</i>, 10 as <i>Declining</i>, and 89 as <i>Naturally Uncommon</i>. Most taxa were listed as either <i>Not Threatened</i> (315 taxa) or required more information for assessment (<i>Data Deficient</i>; 178 taxa). Analyses of temporal changes in conservation status since 2002 revealed that the majority of changes were due to greater understanding of taxa distributions, rather than gains or losses in population sizes or area of occupancy. Insufficient data on taxa distributions, along with a lack of autecological information, are two of the major knowledge gaps facing freshwater invertebrate conservation in New Zealand. Further impediments to conservation include (i) a lack of systematics research, (ii) a large number of species remain undiscovered and undescribed, and (iii) the status and trend of populations is unknown for most taxa. We also provide an analysis of the habitats that harbour many of the rarer taxa. Finally, we conclude by recommending a number of actions that should, collectively, help fill these knowledge gaps and address these issues.
DOI: 10.6084/m9.figshare.12847631.v1
title: R0186_20170829a_videos

description: Rat 0186, skilled reaching data collected on 8/29/2017 in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12854589
title: Insights into the primary radiation damage of silicon by a machine learning interatomic potential

description: We develop a silicon Gaussian approximation machine learning potential suitable for radiation effects, and use it for the first <i>ab initio</i> simulation of primary damage and evolution of collision cascades. The model reliability is confirmed by good reproduction of experimentally measured threshold displacement energies and sputtering yields. We find that clustering and recrystallization of radiation-induced defects, propagation pattern of cascades, and coordination defects in the heat spike phase show striking differences to the widely used analytical potentials. The results reveal that small defect clusters are predominant and show new defect structures such as a vacancy surrounded by three interstitials. Quantum-mechanical level of accuracy in simulation of primary damage was achieved by a silicon machine learning potential. The results show quantitative and qualitative differences from the damage predicted by any previous models.
DOI: 10.6084/m9.figshare.12854607
title: The First Finding of the Lichen <i>Solorina saccata</i> at an Algific Talus Slope in Korea

description: An algific talus slope is composed of broken rocks with vents connected to an ice cave, releasing cool air in summer and relatively warmer air in winter to maintain a more stable microclimate all year round. Such geological features create a very unusual and delicate ecosystem. Although there are around 25 major algific talus slopes in Korea, lichen ecology of these areas had not been investigated to date. In this study, we report the first exploration of lichen diversity and ecology at an algific talus slope, Jangyeol-ri, in Korea. A total of 37 specimens were collected over 2017–2018. Morphological and sequencing analysis revealed 27 species belonging to 18 genera present in the area. Of particular interest among these species was <i>Solorina saccata</i>, as it has previously not been reported in Korea and most members of genus <i>Solorina</i> are known to inhabit alpine regions of the Northern Hemisphere. We provide here a taxonomic key for <i>S. saccata</i> alongside molecular phylogenetic analyses and prediction of potential habitats in South Korea. Furthermore, regions in South Korea potentially suitable for <i>Solorina</i> spp. were predicted based on climatic features of known habitats around the globe. Our results showed that the suitable areas are mostly at high altitudes in mountainous areas where the annual temperature range does not exceed 26.6 °C. Further survey of other environmental conditions determining the suitability of <i>Solorina</i> spp. should lead to a more precise prediction of suitable habitats and trace the origin of <i>Solorina</i> spp. in Korea.
DOI: 10.6084/m9.figshare.12854610
title: A new species of <i>Phrynobatrachus</i> (Amphibia: Anura: Phrynobatrachidae) from the Northern Mountains of Tanzania

description: Using integrative approaches, a new large-bodied species of <i>Phrynobatrachus</i> is described from a series of 48 specimens from the montane forests of the West Usambara and North Pare Mountains of Tanzania. The most distinguishing morphological feature separating <i>Phrynobatrachus ambanguluensis</i> sp. nov from similar species is the markedly overhanging and pointed upper jaw and snout. Mitochondrial 16S rRNA indicates that the new species differs from all other species with published sequence data by a minimum distance of 4.75% and is sister to <i>P. krefftii</i>, with which it has been confused in the past. The new species is known from two forest reserves and is of high conservation concern given these areas are highly impacted by anthropogenic change. http://www.zoobank.org/urn:lsid:zoobank.org:pub:E0C82A87-47A5-426B-978D-96D27FA7A3B7