cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.24983231.v1
title: Electronic supplementary material.zip from Direct method to determine singular point of enveloped surface and its application to worm wheel tooth surface

description: A novel methodology for determining the singular point of an enveloped surface is put forward. Unlike some existing methods, the presented method starts directly from the equation of the enveloped surface instead of that of the generating surface, and it is thus called a direct method. The calculation for the normal vector of the enveloped surface is well simplified with the help of the moving frame approach, which makes the presented method feasible. The singularity condition equation is extracted by using the theory of linear algebra. For singular points with different properties, proper solving techniques are established, including resultant elimination and simple elimination. Applying the developed method, the undercutting characteristics of the Archimedes worm wheel are investigated from the perspective of spatial meshing. The numerical results demonstrate that the worm wheel generally has one undercutting limit line, whose trend is along the tooth width of the wheel. Locating on one side of the tooth surface and near the tooth root is a dangerous part of the worm wheel undercutting. The proposed method is beneficial for the development of gear meshing science.
DOI: 10.5281/zenodo.10419385
title: Dynamic connectivity assessment for a terrestrial predator in a metropolitan region (data)
title: Dynamic connectivity assessment for a terrestrial predator in a metropolitan region

description: Data used in manuscript, Dynamic connectivity assessment for a terrestrial predator in a metropolitan region, containing coyote steps within the Greater Toronto Area, Canada with vegetation density (NDVI), impervious surface (building density), human population density, and distance to linear features extracted for each start and end step. Linear features labeled following traffic: low (LT), medium (MT), high (HT), and function hiking trails (NT) and public service (PS; (ie. railways and transmission lines). 

Code Repository: https://github.com/tgelmi-candusso/Dynamic-connectivity-assessment-for-a-terrestrial-predator-in-a-metropolitan-region

Coyotes (n = 27; Figure 1) were monitored between 2012 and 2021 for 245 ± 136 days (mean ± standard deviation). Coyotes were live-trapped with padded foothold traps, approved by the Ontario Ministry of Natural Resources Wildlife Animal Care Committee (protocols 75-12, 75-13, 75-14 ) or captured with nets by the Toronto Wildlife Centre, and fitted with self-releasing GPS-collars (Lotek Wildcell SG, Newmarket, Canada), recording location data, resampled following the median sampling frequency in order to maintain a constant sampling frequency for each individual (1-3 hours; Appendix S1: Table S1, http://doi.org/10.1002/fee.2633 ). The data were well balanced in terms of demographic traits (12 females/15 males, 19 adults/eight juveniles, 22 residents/15 transients). Residents and transients were distinguished based on movement characteristics.

From consecutive GPS-collar locations, we calculated the turning angle and step length with the steps_by_burst() function from the R package amt (Signer et al. 2019). After fitting the distributions to observed step lengths and turning angles, we generated nine random available steps for each observed step using the random_steps() function from the R package amt (Signer et al. 2019). We standardized the fixed variables included in the model and extracted their values at the endpoint of each step.

The fixed variables included four urban landscape covariates: vegetation density (normalized difference vegetation index or NDVI), human population density, impervious surface, and linear features. To measure the spatiotemporal dynamic responses of coyotes, we included the interaction of the fixed variables with three temporal scales (diel cycles, biological seasons, and climate seasons) and three demographic traits (coyote age, sex, and social status).

More information on the data and how it was used available at http://doi.org/10.1002/fee.2633
DOI: 10.5281/zenodo.10419384
title: Dynamic connectivity assessment for a terrestrial predator in a metropolitan region (data)
title: Dynamic connectivity assessment for a terrestrial predator in a metropolitan region

description: Data used in manuscript, Dynamic connectivity assessment for a terrestrial predator in a metropolitan region, containing coyote steps within the Greater Toronto Area, Canada with vegetation density (NDVI), impervious surface (building density), human population density, and distance to linear features extracted for each start and end step. Linear features labeled following traffic: low (LT), medium (MT), high (HT), and function hiking trails (NT) and public service (PS; (ie. railways and transmission lines). 

Code Repository: https://github.com/tgelmi-candusso/Dynamic-connectivity-assessment-for-a-terrestrial-predator-in-a-metropolitan-region

Coyotes (n = 27; Figure 1) were monitored between 2012 and 2021 for 245 ± 136 days (mean ± standard deviation). Coyotes were live-trapped with padded foothold traps, approved by the Ontario Ministry of Natural Resources Wildlife Animal Care Committee (protocols 75-12, 75-13, 75-14 ) or captured with nets by the Toronto Wildlife Centre, and fitted with self-releasing GPS-collars (Lotek Wildcell SG, Newmarket, Canada), recording location data, resampled following the median sampling frequency in order to maintain a constant sampling frequency for each individual (1-3 hours; Appendix S1: Table S1, http://doi.org/10.1002/fee.2633 ). The data were well balanced in terms of demographic traits (12 females/15 males, 19 adults/eight juveniles, 22 residents/15 transients). Residents and transients were distinguished based on movement characteristics.

From consecutive GPS-collar locations, we calculated the turning angle and step length with the steps_by_burst() function from the R package amt (Signer et al. 2019). After fitting the distributions to observed step lengths and turning angles, we generated nine random available steps for each observed step using the random_steps() function from the R package amt (Signer et al. 2019). We standardized the fixed variables included in the model and extracted their values at the endpoint of each step.

The fixed variables included four urban landscape covariates: vegetation density (normalized difference vegetation index or NDVI), human population density, impervious surface, and linear features. To measure the spatiotemporal dynamic responses of coyotes, we included the interaction of the fixed variables with three temporal scales (diel cycles, biological seasons, and climate seasons) and three demographic traits (coyote age, sex, and social status).

More information on the data and how it was used available at http://doi.org/10.1002/fee.2633
DOI: 10.6084/m9.figshare.24941400
title: Attachment of Supplementary Information from Stability analysis of evolutionary dynamics of 2 × 2 × 2 asymmetric games

description: This ESM file provides code and figures, especially dynamic figures.
DOI: 10.6084/m9.figshare.24941400.v1
title: Attachment of Supplementary Information from Stability analysis of evolutionary dynamics of 2 × 2 × 2 asymmetric games

description: This ESM file provides code and figures, especially dynamic figures.
DOI: 10.5281/zenodo.10493134
title: Sampled Nostalgic Tweets with Named Entities and LLM-based explanations
DOI: 10.5281/zenodo.10493135
title: Sampled Nostalgic Tweets with Named Entities and LLM-based explanations
DOI: 10.21227/vv67-ka20
title: FLAMENCO Learning Disabilities Dataset

description: In the context of the FLAMENCO project, we have released a dataset designed for predicting potential deficiencies in children's communication skills, tailored for Federated Learning. This dataset specifically focuses on addressing two prevalent deficiencies in communication skill development in children: autism and intellectual disability. For each deficiency, two CSV files are provided—one for training machine learning models and another for testing them. Each entry in these CSV files includes the following details: -        case_id: An anonymized identifier used to distinguish cases.-        client_id: Identifies the client to which the case belongs, useful for dataset splitting in federated settings.-        A series of scores measuring specific communication skills:  These scores, such as Verbalization, Voicing, Syntax, etc., are derived from the child's performance in specialised gamified exercises and have been computed with the assistance of expert clinicians.        target: Can be -1 (no clinician's diagnosis available for the case), 0 (no diagnosed deficiency in the case), 1 (indicates a positive diagnosis of communication deficiency by a clinician)TThis project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreements No. 957406 (TERMINET).
DOI: 10.6084/m9.figshare.24983355
title: Supplementary table S1 from The origins and diversification of Holarctic brown bear populations inferred from genomes of past and present populations

description: Information on the genomic data used in this study
DOI: 10.6084/m9.figshare.24983355.v1
title: Supplementary table S1 from The origins and diversification of Holarctic brown bear populations inferred from genomes of past and present populations

description: Information on the genomic data used in this study
DOI: 10.6084/m9.figshare.24983370
title: Supplementary Data 2 from Investigating trade-offs between ovary activation and immune protein expression in bumblebee (<i>Bombus impatiens</i>) workers and queens

description: This file contains all data underlying the figure presented in Supplementary Figure S3, including: 1) proteomics data comparing queenless and queenright workers, 2) queenless and queenright worker sample metadata, 3) differential expression results
DOI: 10.6084/m9.figshare.24983370.v1
title: Supplementary Data 2 from Investigating trade-offs between ovary activation and immune protein expression in bumblebee (<i>Bombus impatiens</i>) workers and queens

description: This file contains all data underlying the figure presented in Supplementary Figure S3, including: 1) proteomics data comparing queenless and queenright workers, 2) queenless and queenright worker sample metadata, 3) differential expression results
DOI: 10.6084/m9.figshare.24983376
title: Supplementary File 1 from Investigating trade-offs between ovary activation and immune protein expression in bumblebee (<i>Bombus impatiens</i>) workers and queens

description: This file contains the R scripts used for data processing
DOI: 10.6084/m9.figshare.24983376.v1
title: Supplementary File 1 from Investigating trade-offs between ovary activation and immune protein expression in bumblebee (<i>Bombus impatiens</i>) workers and queens

description: This file contains the R scripts used for data processing
DOI: 10.6084/m9.figshare.24983193
title: GENOMIC ATTRIBUTES OF AIRWAY COMMENSAL BACTERIA AND MUCOSA- Supplementary figure 8

description: Human Airway Epithelial Cell (HAEC) from a single donor were grown in triplicate and harvested on days 0, 2, 3, 7, 14, 21 and 28. Significant increases were observed in a) trans-epithelial resistance (TEER) b) MUC5AC mucin mRNA production over the time course, indicating full HAEC differentiation. Error bars indicate standard errors of the mean.
DOI: 10.6084/m9.figshare.24983193.v1
title: GENOMIC ATTRIBUTES OF AIRWAY COMMENSAL BACTERIA AND MUCOSA- Supplementary figure 8

description: Human Airway Epithelial Cell (HAEC) from a single donor were grown in triplicate and harvested on days 0, 2, 3, 7, 14, 21 and 28. Significant increases were observed in a) trans-epithelial resistance (TEER) b) MUC5AC mucin mRNA production over the time course, indicating full HAEC differentiation. Error bars indicate standard errors of the mean.
DOI: 10.58153/t7m6v-37090
title: Rasterized Land Use Classification Data

description: Rasterized land cover and land use information in the form of 250m x 250m resolution grid cells available for 19 selected cities in the US.
DOI: 10.17909/5fg6-sx76
title: TESS Data Validation Files: Multi-Sector 1-65

description: All data validation files from Multi-Sector 1-65.
DOI: 10.17909/tcp8-j045
title: TESS Data Validation Files: Multi-Sector 14-60

description: All data validation files from Multi-Sector 14-60.
DOI: 10.17909/ghk7-jy96
title: TESS Data Validation Files: Multi-Sector 14-55

description: All data validation files from Multi-Sector 14-55.
DOI: 10.17909/5yzm-w281
title: TESS Data Validation Files: Multi-Sector 14-50

description: All data validation files from Multi-Sector 14-50.
DOI: 10.6084/m9.figshare.21587088.v4
title: An Empirical Analysis of Issue Templates Usage in Large-Scale Projects on GitHub

description: <b>The content of the replication package is the following:</b><b>Issue History of 100 Projects.zip:</b>For each project, there is a JSON file that contains information about the history of each issue.<br><b>repos.zip:</b>For each project, there is a .git folder that contains the repository content.<br><b>code.zip:</b>Code for mining, analyzing, and reporting for our research can be found in this zipped folder.<br><b>Reports.zip:</b>Contains the figures that are generated by our code and used in the paper.<br><b>Research Survey - Issue Templates on GitHub (Responses) - Shared.pdf</b>Contains the questions and answers to our research survey.
DOI: 10.26022/ieda/112944
title: Cr isotope composition of components of non-carbonaceous chondrites

description: This dataset contains Cr isotope composition, Fe/Cr and Mn/Cr ratios of terrestrial standards, leachates, mineral separates and whole-rock of non-carbonaceous chondrites. The ordinary chondrite NWA 8007 (L3.2) and the enstatite chondrites Sahara 97158 (EH3) and PCA 91020 (EL3) were subjected to a leaching procedure (or sequential dissolution). Data has been acquired at Laboratoire Magmas et Volcans of Université Clermont Auvergne in Clermont-Ferrand, France. Nd and Sm isotope compositions are already available on these samples (Frossard et al., 2022; https://doi.org/10.1126/science.abq7351). The purpose of this dataset is to evaluate the variability of the Cr isotope composition in chondrites and its relation to redox conditions and thermal metamorphism.
DOI: 10.6084/m9.figshare.24983403
title: Neuroanatomical Atlas in NIfTI format from Quantitative functional imaging of the pigeon brain: implications for the evolution of avian powered flight

description: Overlays of neuroanatomical regions provided in NIfTI format. Regions registered to the MRI dataset provided by Güntürkün et al [17] (https://www.uantwerpen.be/en/research-groups/bio-imaging-lab/research/mri-atlases/pigeon-brain-atlas/).
DOI: 10.6084/m9.figshare.24983403.v1
title: Neuroanatomical Atlas in NIfTI format from Quantitative functional imaging of the pigeon brain: implications for the evolution of avian powered flight

description: Overlays of neuroanatomical regions provided in NIfTI format. Regions registered to the MRI dataset provided by Güntürkün et al [17] (https://www.uantwerpen.be/en/research-groups/bio-imaging-lab/research/mri-atlases/pigeon-brain-atlas/).
DOI: 10.34740/kaggle/dsv/7385242
title: Color Distribution of Sour Patch Kids
DOI: 10.6084/m9.figshare.22806875
title: Data and Matlab scripts used in D. H. Rothman, Slow Closure of Earth's Carbon Cycle, PNAS

description: This code and associated data files replicate all figures andresults contained in D. H. Rothman, Slow Closure of Earth's Carbon Cycle, PNAS, January 2024.<br>----------------------------------Data Tables----------------------------------All data contained in the data tables has either been previouslypublished explicitly or displayed in previously publications.Detailed references are given in the manuscript.<br>A list of tables follows.<br>degtable.csvContains the degradation database of 23 sediment cores originallystudied by Rothman and Forney (2007). See the header within thisfile for more information.<br>T*.csvWithin these tables, the units of measurement are as follows:age [sediment age, Myr]depth [sediment depth, m]n [cells per cubic cm]org [wt % total organic carbon]<br>There is some overlap in the content of these tables.A summary follows:<br>Tn.csv contains cell counts as a function of site, age, and depth inproductive regions.<br>Torg.csv contains Corg concentrations as a function of site, age, anddepth in productive regions.<br>Tspgeqpac0.csv contains cell counts as a function of site, age, anddepth in the South Pacific Gyre and Pacific Equatorial Transect.<br>Tspgeqpac.csv contains cell counts as a function of site, age, anddepth in the South Pacific Gyre and Pacific Equatorial Transect onlyfor ages greater than t*=1.5 Myr.<br>Tspgeqpacorg0.csv contains Corg concentrations as a function of site,age, and depth in the South Pacific Gyre and Pacific EquatorialTransect.<br>Tspgorg.csv contains Corg concentrations as a function of site, age,and depth in the South Pacific Gyre<br><br>----------------------------------Recreate Figures----------------------------------<br>recreate_figures.m makes all figures in the manuscript.See comments within this file for the specific scriptscorresponding to each figure.<br>All scripts have been successfully run using Matlab R2022aunder the Linux-based OS Ubuntu 18.04.1.
DOI: 10.6084/m9.figshare.22806875.v1
title: Data and Matlab scripts used in D. H. Rothman, Slow Closure of Earth's Carbon Cycle, PNAS

description: This code and associated data files replicate all figures andresults contained in D. H. Rothman, Slow Closure of Earth's Carbon Cycle, PNAS, January 2024.<br>----------------------------------Data Tables----------------------------------All data contained in the data tables has either been previouslypublished explicitly or displayed in previously publications.Detailed references are given in the manuscript.<br>A list of tables follows.<br>degtable.csvContains the degradation database of 23 sediment cores originallystudied by Rothman and Forney (2007). See the header within thisfile for more information.<br>T*.csvWithin these tables, the units of measurement are as follows:age [sediment age, Myr]depth [sediment depth, m]n [cells per cubic cm]org [wt % total organic carbon]<br>There is some overlap in the content of these tables.A summary follows:<br>Tn.csv contains cell counts as a function of site, age, and depth inproductive regions.<br>Torg.csv contains Corg concentrations as a function of site, age, anddepth in productive regions.<br>Tspgeqpac0.csv contains cell counts as a function of site, age, anddepth in the South Pacific Gyre and Pacific Equatorial Transect.<br>Tspgeqpac.csv contains cell counts as a function of site, age, anddepth in the South Pacific Gyre and Pacific Equatorial Transect onlyfor ages greater than t*=1.5 Myr.<br>Tspgeqpacorg0.csv contains Corg concentrations as a function of site,age, and depth in the South Pacific Gyre and Pacific EquatorialTransect.<br>Tspgorg.csv contains Corg concentrations as a function of site, age,and depth in the South Pacific Gyre<br><br>----------------------------------Recreate Figures----------------------------------<br>recreate_figures.m makes all figures in the manuscript.See comments within this file for the specific scriptscorresponding to each figure.<br>All scripts have been successfully run using Matlab R2022aunder the Linux-based OS Ubuntu 18.04.1.
DOI: 10.18112/openneuro.ds004926.v1.2.1
title: Reliability 3T fMRI experiment
DOI: 10.5517/ccdc.csd.cc2g8f28
title: CCDC 2272209: Experimental Crystal Structure Determination

description: Related Article: Jing Liu, Deng-Yin Liu, Qian Yang, Yao-Fu Zeng, Xiao-Li Wang, Peng-Fei Wang, Yu-Jun Ruan, Miao-Miao Wen, Shang-Shi Zhang, Li-da Du, Xu-Ge Liu|2024|Chem.Commun.|60|598|doi:10.1039/D3CC05342C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2g8f4b
title: CCDC 2272211: Experimental Crystal Structure Determination

description: Related Article: Jing Liu, Deng-Yin Liu, Qian Yang, Yao-Fu Zeng, Xiao-Li Wang, Peng-Fei Wang, Yu-Jun Ruan, Miao-Miao Wen, Shang-Shi Zhang, Li-da Du, Xu-Ge Liu|2024|Chem.Commun.|60|598|doi:10.1039/D3CC05342C
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2grd2q
title: CCDC 2286593: Experimental Crystal Structure Determination

description: Related Article: Ken Yamanomoto, Kota Yamamoto, Satoshi Yoshida, Sota Sato, Takahiko Akiyama|2024|Chem.Commun.|60|582|doi:10.1039/D3CC05142K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2gs2n0
title: CCDC 2287262: Experimental Crystal Structure Determination

description: Related Article: Eylul Calikyilmaz, Gozde Karaoglu, Mete Demir, Onur Şahin, Burak Ulgut, Akin Akdag, Yunus Emre Türkmen|2024|Chem.Commun.|60|550|doi:10.1039/D3CC05109A
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h2wbt
title: CCDC 2296676: Experimental Crystal Structure Determination

description: Related Article: Santosh J. Gharpure, Sanyog Kumari|2023|Chem.Commun.|60|538|doi:10.1039/D3CC05237K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h2wdw
title: CCDC 2296678: Experimental Crystal Structure Determination

description: Related Article: Santosh J. Gharpure, Sanyog Kumari|2023|Chem.Commun.|60|538|doi:10.1039/D3CC05237K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2h2zq9
title: CCDC 2296781: Experimental Crystal Structure Determination

description: Related Article: Santosh J. Gharpure, Sanyog Kumari|2023|Chem.Commun.|60|538|doi:10.1039/D3CC05237K
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.