cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.nuks2w
title: Occurrence Download

description: A dataset containing 6501 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pistacia chinensis Bunge)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 6501 records from 97 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111349-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xwtqud
title: Occurrence Download

description: A dataset containing 279 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Syzygium aromaticum (L.) Merr. & L.M.Perry)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 279 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111350-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cm8tfs
title: Occurrence Download

description: A dataset containing 1967 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pistacia vera L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 1967 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111351-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.f85s8b
title: Occurrence Download

description: A dataset containing 3025858163 species occurrences available in GBIF matching the query:
{ }

 The dataset includes 3025858163 records from 75912 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111196-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.89w8b7
title: Occurrence Download

description: A dataset containing 3996 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Syzygium cumini (L.) Skeels)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 3996 records from 269 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111352-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g7wqkn
title: Occurrence Download

description: A dataset containing 3923 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-116.95745 32.41341,-116.94452 32.4374,-116.92899 32.44533,-116.90933 32.44951,-116.90467 32.4422,-116.86845 32.43615,-116.85706 32.42947,-116.85758 32.42217,-116.84827 32.41195,-116.82757 32.41612,-116.81308 32.43094,-116.78979 32.42635,-116.77737 32.43553,-116.76547 32.43114,-116.74374 32.43761,-116.72769 32.42822,-116.71424 32.43553,-116.70182 32.44784,-116.66611 32.45305,-116.64852 32.46536,-116.63093 32.46182,-116.61488 32.48289,-116.60557 32.48685,-116.59677 32.47475,-116.57452 32.47746,-116.5621 32.47392,-116.54916 32.48623,-116.55486 32.5,-116.53312 32.51231,-116.53778 32.53297,-116.51398 32.52921,-116.48551 32.51001,-116.46481 32.50417,-116.45498 32.51168,-116.44567 32.50146,-116.42963 32.52024,-116.41203 32.52462,-116.41721 32.54215,-116.40065 32.57011,-116.40323 32.59473,-116.66146 32.57345,-116.96263 32.5482,-117.10442 32.5361,-117.1039 32.52441,-117.09562 32.51148,-117.09666 32.49374,-117.07699 32.48414,-117.05784 32.48602,-117.04025 32.47893,-117.02266 32.47621,-117.01903 32.46849,-117.00506 32.45931,-116.98281 32.45264,-116.97815 32.44742,-116.99523 32.43302,-116.99316 32.42676,-116.97194 32.41424,-116.95745 32.41341))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Plantae",
 "Year 2000-2024"
 ]
}

 The dataset includes 3923 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111353-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kma492
title: Occurrence Download

description: A dataset containing 118 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Syzygium grande (Wight) N.P.Balakr.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 118 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111355-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.axpsmb
title: Occurrence Download

description: A dataset containing 18340 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pistia stratiotes L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 18340 records from 477 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111354-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.93t9hv
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Sasa longiligulata McClure"
 ]
}

 The dataset includes 22 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111356-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ctfch2
title: Occurrence Download

description: A dataset containing 8807 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Syzygium jambos (L.) Alston)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 8807 records from 357 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111357-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.87hbtx
title: Occurrence Download

description: A dataset containing 18271 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Pisum sativum L.)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 18271 records from 436 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0111358-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bvy6p5
title: Occurrence Download

description: A dataset containing 33 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salacia viminea Wall."
 ]
}

 The dataset includes 33 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103059-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jckgrj
title: Occurrence Download

description: A dataset containing 69 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia jurisicii Kosanin"
 ]
}

 The dataset includes 69 records from 22 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103060-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nbmt85
title: Occurrence Download

description: A dataset containing 24 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salacia vitiensis A.C.Sm."
 ]
}

 The dataset includes 24 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103061-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.txf3qj
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia karelinii J.B.Walker"
 ]
}

 The dataset includes 34 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103063-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.phkr9w
title: Occurrence Download

description: A dataset containing 21899 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mozambique",
 "TaxonKey is Fabaceae"
 ]
}

 The dataset includes 21899 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103062-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vxv8wu
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salacia volubilis Loes. & H.J.P.Winkl."
 ]
}

 The dataset includes 22 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103064-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y2szrk
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia kermanshahensis Rech.f."
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103065-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.uwqu8w
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salacia wayanadica Sujana, Nagaraju, Ratheesh & Anil Kumar"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103066-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.tpjkuc
title: Occurrence Download

description: A dataset containing 30 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia kiangsiensis C.Y.Wu"
 ]
}

 The dataset includes 30 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103067-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ttee8z
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Pseudococcus markharveyi Gullan, 2013"
 ]
}

 The dataset includes 6 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103068-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n6vz4q
title: Occurrence Download

description: A dataset containing 11 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salacia wenzelii Merr."
 ]
}

 The dataset includes 11 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103069-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.wn8zpy
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia kiaometiensis H.Lév."
 ]
}

 The dataset includes 19 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103070-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10927880
title: Raw data for the submitted manuscript entitled "Prospective Scenarios for Addressing the Agricultural Plastic Waste Issue: Results of a Territorial Analysis"

description: Agricultural activities have been positively affected by the use of plastic products, but this has resulted in the production of plastic waste and led to an increase in environmental pollution.  This file concerns plastic waste indices to different crop types and plastic products allowed quantifying and georeferencing actual plastic waste production. Two improved scenarios were considered, the first consisted of extending the lifespan of some plastics, and the second entailed the introduction of some biodegradable alternatives.
DOI: 10.5281/zenodo.10927881
title: Raw data for the submitted manuscript entitled "Prospective Scenarios for Addressing the Agricultural Plastic Waste Issue: Results of a Territorial Analysis"

description: Agricultural activities have been positively affected by the use of plastic products, but this has resulted in the production of plastic waste and led to an increase in environmental pollution.  This file concerns plastic waste indices to different crop types and plastic products allowed quantifying and georeferencing actual plastic waste production. Two improved scenarios were considered, the first consisted of extending the lifespan of some plastics, and the second entailed the introduction of some biodegradable alternatives.
DOI: 10.15468/dl.p69hje
title: Occurrence Download

description: A dataset containing 370 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salacia whytei Loes."
 ]
}

 The dataset includes 370 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103071-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rqqgj7
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia komarovii Pobed."
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103072-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5fuy75
title: Occurrence Download

description: A dataset containing 217 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salacia zenkeri Loes."
 ]
}

 The dataset includes 217 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103073-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25466461
title: Prediction of blood-brain barrier penetrating peptides based on data augmentation with Augur

description: The blood-brain barrier serves as a critical interface between the bloodstream and brain tissue, mainly composed of pericytes, neurons, endothelial cells, and tightly connected basal membranes. It plays a pivotal role in safeguarding brain from harmful substances, thus protecting the integrity of the nervous system and preserving overall brain homeostasis. However, this remarkable selective transmission also poses a formidable challenge in the realm of central nervous system diseases treatment, hindering the delivery of large-molecule drugs into the brain. In response to this challenge, many researchers have devoted themselves to developing drug delivery systems capable of breaching the blood-brain barrier. Among these, blood-brain barrier penetrating peptides have emerged as promising candidates. These peptides had the advantages of high biosafety, ease of synthesis, and exceptional penetration efficiency, making them an effective drug delivery solution. While previous studies have developed a few prediction models for B3PPs, their performance has often been hampered by issue of limited positive data.In this study, we present Augur, a novel prediction model using borderline-SMOTE-based data augmentation and machine learning. we extract highly interpretable physicochemical properties of blood-brain barrier penetrating peptides while solving the issues of small sample size and imbalance of positive and negative samples. Experimental results demonstrate the superior prediction performance of Augur with an AUC value of 0.932 on the training set and 0.931 on the independent test set.This newly developed Augur model demonstrates superior performance in predicting blood-brain barrier penetrating peptides, offering valuable insights for drug development targeting neurological disorders. This breakthrough may enhance the efficiency of peptide-based drug discovery and pave the way for innovative treatment strategies for central nervous system diseases.
DOI: 10.15468/dl.kvf2we
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia korolkovii Regel & Schmalh."
 ]
}

 The dataset includes 32 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103074-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.94a637
title: Occurrence Download

description: A dataset containing 376 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salacighia letestuana (Pellegr.) Blakelock"
 ]
}

 The dataset includes 376 records from 33 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103075-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10924994
title: Additional data for the gene zgc::64022

description: Additional data for the gene zgc::64022, which did not fit the file size limit of the main data set located at the following address:

https://doi.org/10.5281/zenodo.5268683Note that these files needed to be updated. A mistake occurred during cropping of raw data on the microscope computer. The newer version reflects these corrections.
DOI: 10.5281/zenodo.5271469
title: Additional data for the gene zgc::64022

description: Additional data for the gene zgc::64022, which did not fit the file size limit of the main data set located at the following address:

https://doi.org/10.5281/zenodo.5268683Note that these files needed to be updated. A mistake occurred during cropping of raw data on the microscope computer. The newer version reflects these corrections.
DOI: 10.5281/zenodo.5271470
title: Additional data for the gene zgc::64022

description: Additional data for the gene <em>zgc::64022</em>, which did not fit the file size limit of the main data set located at the following address: https://doi.org/10.5281/zenodo.5268683
DOI: 10.15468/dl.5edf6r
title: Occurrence Download

description: A dataset containing 125 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia koyamae Makino"
 ]
}

 The dataset includes 125 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103076-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jug8p2
title: Occurrence Download

description: A dataset containing 32 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salacighia linderi (Loes. ex Harms) Blakelock"
 ]
}

 The dataset includes 32 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103077-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8su7zz
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salvia kronenburgii Rech.f."
 ]
}

 The dataset includes 10 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103078-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h4espp
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Salaciopsis glomerata Hürl."
 ]
}

 The dataset includes 63 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0103079-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.5268682
title: Microscopy data: interaction of the gene zgc::64022 with RNA polymerase II clusters during early zebrafish embryo development

description: Microscopy image data containing fluorescently labeled gene loci, recruited RNA polymerase II, and elongating RNA polymerase II.


This data set is for the gene zgc::64022 and is obtained from fixed zebrafish embryos, collected at the developmental stages oblong, sphere, dome, 30% epiboly, and 50% epiboly (indicated in the file names). Data were recorded using an instant-SIM microscope (iSIM, VisiTech UK) with a 100X TIRF oil immersion objective (Nikon, NA 1.49, CFI SR HP Apo TIRF 100XAC Oil). Two independent experiments were performed (IF1, IF2 in the file name), for each experiment, between one and three samples were prepared per stage and experiment (001, 002 in the file name).


The image data are in the ND2 format (Nikon proprietary) and can be imported using the BioFormats importer (Open Microscopy Environment).
description: Additional data that did not fit the file size limit are available at this address: https://doi.org/10.5281/zenodo.10924994
DOI: 10.5281/zenodo.5268683
title: Microscopy data: interaction of the gene zgc::64022 with RNA polymerase II clusters during early zebrafish embryo development

description: Microscopy image data containing fluorescently labeled gene loci, recruited RNA polymerase II, and elongating RNA polymerase II.


This data set is for the gene zgc::64022 and is obtained from fixed zebrafish embryos, collected at the developmental stages oblong, sphere, dome, 30% epiboly, and 50% epiboly (indicated in the file names). Data were recorded using an instant-SIM microscope (iSIM, VisiTech UK) with a 100X TIRF oil immersion objective (Nikon, NA 1.49, CFI SR HP Apo TIRF 100XAC Oil). Two independent experiments were performed (IF1, IF2 in the file name), for each experiment, between one and three samples were prepared per stage and experiment (001, 002 in the file name).


The image data are in the ND2 format (Nikon proprietary) and can be imported using the BioFormats importer (Open Microscopy Environment).
description: Additional data that did not fit the file size limit are available at this address: https://doi.org/10.5281/zenodo.10924994