cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.5701624
title: Additional file 7: Table S5. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: Enrichement analysis of local-associated genes in eGWAS by GOrilla. (XLSX 28 kb)
DOI: 10.6084/m9.figshare.5701624.v1
title: Additional file 7: Table S5. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: Enrichement analysis of local-associated genes in eGWAS by GOrilla. (XLSX 28 kb)
DOI: 10.6084/m9.figshare.5701615
title: Additional file 4: Table S2. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: List of specimens used in this study, with collection data, depository data and unique specimen identifiers. (XLSX 59Â kb)
DOI: 10.6084/m9.figshare.5701615.v1
title: Additional file 4: Table S2. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: List of specimens used in this study, with collection data, depository data and unique specimen identifiers. (XLSX 59Â kb)
DOI: 10.6084/m9.figshare.5701603
title: Additional file 6: Table S4. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: Enrichement analysis of associated genes in eGWAS by GOrilla. (XLSX 39 kb)
DOI: 10.6084/m9.figshare.5701603.v1
title: Additional file 6: Table S4. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: Enrichement analysis of associated genes in eGWAS by GOrilla. (XLSX 39 kb)
DOI: 10.6084/m9.figshare.5701600
title: Additional file 2: Table S1. of Isogenic mice exhibit sexually-dimorphic DNA methylation patterns across multiple tissues

description: DMTs between females and males in mouse liver. P-values and q-values were calculated using MethylKit. (XLSX 217Â kb)
DOI: 10.6084/m9.figshare.5701600.v1
title: Additional file 2: Table S1. of Isogenic mice exhibit sexually-dimorphic DNA methylation patterns across multiple tissues

description: DMTs between females and males in mouse liver. P-values and q-values were calculated using MethylKit. (XLSX 217Â kb)
DOI: 10.6084/m9.figshare.5701597
title: Additional file 3: Table S1. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Temnothorax species groups currently used in the literature, with references. (XLSX 32Â kb)
DOI: 10.6084/m9.figshare.5701597.v1
title: Additional file 3: Table S1. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Temnothorax species groups currently used in the literature, with references. (XLSX 32Â kb)
DOI: 10.6084/m9.figshare.5701579
title: Additional file 24: Table S14. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Support values and 95% HPDs for select nodes across analyses. (XLSX 43Â kb)
DOI: 10.6084/m9.figshare.5701579.v1
title: Additional file 24: Table S14. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Support values and 95% HPDs for select nodes across analyses. (XLSX 43Â kb)
DOI: 10.6084/m9.figshare.5701576
title: Additional file 4: Table S3. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: ASE analysis results. (XLSX 126 kb)
DOI: 10.6084/m9.figshare.5701576.v1
title: Additional file 4: Table S3. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: ASE analysis results. (XLSX 126 kb)
DOI: 10.6084/m9.figshare.5701540
title: Additional file 21: Table S13. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Biogeographic reconstructions at selected nodes, inferred with BioGeoBEARS using empirical data and sensitivity analyses. (XLSX 34Â kb)
DOI: 10.6084/m9.figshare.5701540.v1
title: Additional file 21: Table S13. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Biogeographic reconstructions at selected nodes, inferred with BioGeoBEARS using empirical data and sensitivity analyses. (XLSX 34Â kb)
DOI: 10.6084/m9.figshare.5701522
title: Additional file 20: Table S12. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Biogeographic model comparisons from BioGeoBEARS analyses. (XLSX 44Â kb)
DOI: 10.6084/m9.figshare.5701522.v1
title: Additional file 20: Table S12. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Biogeographic model comparisons from BioGeoBEARS analyses. (XLSX 44Â kb)
DOI: 10.6084/m9.figshare.5701519
title: Additional file 1: Table S1. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: Associations detected by eGWAS. (XLSX 342 kb)
DOI: 10.6084/m9.figshare.5701519.v1
title: Additional file 1: Table S1. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: Associations detected by eGWAS. (XLSX 342 kb)
DOI: 10.6084/m9.figshare.5701516
title: Additional file 1: Table S1. of TLR3 promotes MMP-9 production in primary human airway epithelial cells through Wnt/Î˛-catenin signaling

description: Expression data from the EMT profiler array. (XLSX 15.9Â kb)
DOI: 10.6084/m9.figshare.5701516.v1
title: Additional file 1: Table S1. of TLR3 promotes MMP-9 production in primary human airway epithelial cells through Wnt/Î˛-catenin signaling

description: Expression data from the EMT profiler array. (XLSX 15.9Â kb)
DOI: 10.6084/m9.figshare.5701504
title: Additional file 16: Table S10. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: Complete Blood Cell Counts for 195 animals among the 243 eGWAS pigs. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.5701504.v1
title: Additional file 16: Table S10. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: Complete Blood Cell Counts for 195 animals among the 243 eGWAS pigs. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.5701489
title: Additional file 15: Table S9. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: QTLs in AnimalQTLdb for pigs (&lt;10Â Mb) harbouring at least one ASE-SNPs. (XLSX 44 kb)
DOI: 10.6084/m9.figshare.5701489.v1
title: Additional file 15: Table S9. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: QTLs in AnimalQTLdb for pigs (&lt;10Â Mb) harbouring at least one ASE-SNPs. (XLSX 44 kb)
DOI: 10.6084/m9.figshare.5701474
title: Additional file 14: Table S8. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: QTLs in AnimalQTLdb (&lt;10Â Mb) for pigs harbouring at least one eQTL-SNP. (XLSX 90 kb)
DOI: 10.6084/m9.figshare.5701474.v1
title: Additional file 14: Table S8. of Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis

description: QTLs in AnimalQTLdb (&lt;10Â Mb) for pigs harbouring at least one eQTL-SNP. (XLSX 90 kb)
DOI: 10.6084/m9.figshare.5701468
title: Additional file 16: Table S11. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: UCE assembly summary statistics. (XLSX 46Â kb)
DOI: 10.6084/m9.figshare.5701468.v1
title: Additional file 16: Table S11. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: UCE assembly summary statistics. (XLSX 46Â kb)
DOI: 10.6084/m9.figshare.5701435
title: Additional file 14: Table S10. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: The 14 partitions and substitution models identified by PartitionFinder and used in the maximum likelihood and Bayesian analyses of the concatenated Sanger sequencing dataset. (XLSX 35Â kb)
DOI: 10.6084/m9.figshare.5701435.v1
title: Additional file 14: Table S10. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: The 14 partitions and substitution models identified by PartitionFinder and used in the maximum likelihood and Bayesian analyses of the concatenated Sanger sequencing dataset. (XLSX 35Â kb)
DOI: 10.6084/m9.figshare.5701429
title: Additional file 5: of De-novo emergence of SINE retroposons during the early evolution of passerine birds

description: Fasta-formatted multilocus alignment of concatenated RE-flanking sequences used for generating the phylogenetic tree of Fig. 3a. (TXT 660Â kb)
DOI: 10.6084/m9.figshare.5701429.v1
title: Additional file 5: of De-novo emergence of SINE retroposons during the early evolution of passerine birds

description: Fasta-formatted multilocus alignment of concatenated RE-flanking sequences used for generating the phylogenetic tree of Fig. 3a. (TXT 660Â kb)
DOI: 10.6084/m9.figshare.5701423
title: Additional file 13: Table S9. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Sanger dataset summary statistics. (XLSX 44Â kb)
DOI: 10.6084/m9.figshare.5701423.v1
title: Additional file 13: Table S9. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Sanger dataset summary statistics. (XLSX 44Â kb)
DOI: 10.6084/m9.figshare.5701408
title: Additional file 5: of Spatial pattern in stress drops of moderate-sized earthquakes on the Pacific Plate off the south-east of Hokkaido, Japan: implications for the heterogeneity of frictional properties

description: results_S. (TXT 54 kb)
DOI: 10.6084/m9.figshare.5701405
title: Additional file 12: Table S8. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Results of HiSSE model comparisons for the nesting habit and parasitism datasets. (XLSX 17Â kb)
DOI: 10.6084/m9.figshare.5701405.v1
title: Additional file 12: Table S8. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Results of HiSSE model comparisons for the nesting habit and parasitism datasets. (XLSX 17Â kb)
DOI: 10.6084/m9.figshare.5701402
title: Additional file 4: of De-novo emergence of SINE retroposons during the early evolution of passerine birds

description: Fasta-formatted alignments of all RE presence/absence markers. The presented loci are labeled corresponding to the markers listed in Additional file 1: Table S2. The names of transposed elements correspond to those in Repbase. (TXT 805Â kb)
DOI: 10.6084/m9.figshare.5701402.v1
title: Additional file 4: of De-novo emergence of SINE retroposons during the early evolution of passerine birds

description: Fasta-formatted alignments of all RE presence/absence markers. The presented loci are labeled corresponding to the markers listed in Additional file 1: Table S2. The names of transposed elements correspond to those in Repbase. (TXT 805Â kb)
DOI: 10.6084/m9.figshare.5701393
title: MOESM8 of Comparison of mitochondrial gene expression and polysome loading in different tobacco tissues

description: Additional file 8: Table S2. Blast results of mitochondrial tRNA oligonucleotides. Blast searches were carried out to identify the percentage of sequence similarity between mitochondrial and plastid encoded tRNA genes. The nucleotide sequence for most mitochondrial tRNAs [except for trnE(uuc) and trnI(cau)] are highly similar (70% to 100%) to those encoded by the plastids.
DOI: 10.6084/m9.figshare.5701393.v1
title: MOESM8 of Comparison of mitochondrial gene expression and polysome loading in different tobacco tissues

description: Additional file 8: Table S2. Blast results of mitochondrial tRNA oligonucleotides. Blast searches were carried out to identify the percentage of sequence similarity between mitochondrial and plastid encoded tRNA genes. The nucleotide sequence for most mitochondrial tRNAs [except for trnE(uuc) and trnI(cau)] are highly similar (70% to 100%) to those encoded by the plastids.
DOI: 10.6084/m9.figshare.5701384
title: Additional file 4: of Spatial pattern in stress drops of moderate-sized earthquakes on the Pacific Plate off the south-east of Hokkaido, Japan: implications for the heterogeneity of frictional properties

description: results_P. (TXT 54 kb)
DOI: 10.6084/m9.figshare.5701381
title: Additional file 11: Table S7. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: List of Temnothorax species and core formicoxenines, coded for behavioral characteristics. (XLSX 49Â kb)
DOI: 10.6084/m9.figshare.5701381.v1
title: Additional file 11: Table S7. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: List of Temnothorax species and core formicoxenines, coded for behavioral characteristics. (XLSX 49Â kb)
DOI: 10.6084/m9.figshare.5701375
title: MOESM7 of Comparison of mitochondrial gene expression and polysome loading in different tobacco tissues

description: Additional file 7: Dataset S2. Mitochondrial polysomal mRNA levels in tobacco organs [(polysomal RNA (AVG) and standard deviations) and log2 fold change in expression of polysomal RNA]. The data represent mean values of four biological replicates for young leaves and fully expanded leaves, three biological replicates for roots and flowers and two biological replicates for floral buds. The log2 fold change is the transformation of ratios taking data for each tissue as a reference.
DOI: 10.6084/m9.figshare.5701375.v1
title: MOESM7 of Comparison of mitochondrial gene expression and polysome loading in different tobacco tissues

description: Additional file 7: Dataset S2. Mitochondrial polysomal mRNA levels in tobacco organs [(polysomal RNA (AVG) and standard deviations) and log2 fold change in expression of polysomal RNA]. The data represent mean values of four biological replicates for young leaves and fully expanded leaves, three biological replicates for roots and flowers and two biological replicates for floral buds. The log2 fold change is the transformation of ratios taking data for each tissue as a reference.
DOI: 10.6084/m9.figshare.5701363
title: Additional file 10: Table S6. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Matrix of all morphological characters and indices used in this study, by taxon. (XLSX 50Â kb)
DOI: 10.6084/m9.figshare.5701363.v1
title: Additional file 10: Table S6. of Insights into the evolution, biogeography and natural history of the acorn ants, genus Temnothorax Mayr (hymenoptera: Formicidae)

description: Matrix of all morphological characters and indices used in this study, by taxon. (XLSX 50Â kb)
DOI: 10.6084/m9.figshare.5701351
title: MOESM6 of Comparison of mitochondrial gene expression and polysome loading in different tobacco tissues

description: Additional file 6: Table S1. Mitochondrial microarray oligonucleotides for Nicotiana tabacum and Arabidopsis thaliana.
DOI: 10.6084/m9.figshare.5701351.v1
title: MOESM6 of Comparison of mitochondrial gene expression and polysome loading in different tobacco tissues

description: Additional file 6: Table S1. Mitochondrial microarray oligonucleotides for Nicotiana tabacum and Arabidopsis thaliana.
DOI: 10.6084/m9.figshare.5701348
title: Additional file 2: of De-novo emergence of SINE retroposons during the early evolution of passerine birds

description: Majority-rule consensus sequence for PittSINE as reconstructed from our PittSINE-bearing presence/absence patterns. (TXT 155 bytes)
DOI: 10.6084/m9.figshare.5701348.v1
title: Additional file 2: of De-novo emergence of SINE retroposons during the early evolution of passerine birds

description: Majority-rule consensus sequence for PittSINE as reconstructed from our PittSINE-bearing presence/absence patterns. (TXT 155 bytes)
DOI: 10.6084/m9.figshare.5701345
title: MOESM5 of Comparison of mitochondrial gene expression and polysome loading in different tobacco tissues

description: Additional file 5: Dataset S1. Mitochondrial transcript levels in tobacco organs [(total RNA (AVG) and standard deviations) and log2 fold change in expression of total RNA]. The data represent mean values of four biological replicates for young leaves and fully expanded leaves, three biological replicates for roots and flowers and two biological replicates for floral buds. The log2 fold change is the transformation of ratios taking data for each tissue as a reference.
DOI: 10.6084/m9.figshare.5701345.v1
title: MOESM5 of Comparison of mitochondrial gene expression and polysome loading in different tobacco tissues

description: Additional file 5: Dataset S1. Mitochondrial transcript levels in tobacco organs [(total RNA (AVG) and standard deviations) and log2 fold change in expression of total RNA]. The data represent mean values of four biological replicates for young leaves and fully expanded leaves, three biological replicates for roots and flowers and two biological replicates for floral buds. The log2 fold change is the transformation of ratios taking data for each tissue as a reference.
DOI: 10.6084/m9.figshare.5701339
title: MOESM8 of Can human experts predict solubility better than computers?

description: Additional file 8. The human expertsâ solubility predictions.
DOI: 10.6084/m9.figshare.5701339.v1
title: MOESM8 of Can human experts predict solubility better than computers?

description: Additional file 8. The human expertsâ solubility predictions.
DOI: 10.6084/m9.figshare.5701318
title: MOESM7 of Can human experts predict solubility better than computers?

description: Additional file 7. Ten python scripts implementing the different machine learning algorithms.
DOI: 10.6084/m9.figshare.5701318.v1
title: MOESM7 of Can human experts predict solubility better than computers?

description: Additional file 7. Ten python scripts implementing the different machine learning algorithms.
DOI: 10.6084/m9.figshare.5701315
title: Additional file 1: of Spatial pattern in stress drops of moderate-sized earthquakes on the Pacific Plate off the south-east of Hokkaido, Japan: implications for the heterogeneity of frictional properties

description: eqlist. (TXT 65 kb)
DOI: 10.6084/m9.figshare.5701300
title: MOESM6 of Can human experts predict solubility better than computers?

description: Additional file 6. The machine learning computed solubility predictions.
DOI: 10.6084/m9.figshare.5701300.v1
title: MOESM6 of Can human experts predict solubility better than computers?

description: Additional file 6. The machine learning computed solubility predictions.
DOI: 10.6084/m9.figshare.5701252
title: MOESM3 of Can human experts predict solubility better than computers?

description: Additional file 3. The name, structure and solubility data in electronic form for both training and test sets, including SMILES representations of the chemical structures. This DLS-100 dataset may be reused freely with appropriate citation of our work, no further permission is required. It is also available from the University of St Andrews research portal [14] with https://doi.org/10.17630/3a3a5abc-8458-4924-8e6c-b804347605e8 and from figshare [15] with https://doi.org/10.6084/m9.figshare.5545639 .
DOI: 10.6084/m9.figshare.5701252.v1
title: MOESM3 of Can human experts predict solubility better than computers?

description: Additional file 3. The name, structure and solubility data in electronic form for both training and test sets, including SMILES representations of the chemical structures. This DLS-100 dataset may be reused freely with appropriate citation of our work, no further permission is required. It is also available from the University of St Andrews research portal [14] with https://doi.org/10.17630/3a3a5abc-8458-4924-8e6c-b804347605e8 and from figshare [15] with https://doi.org/10.6084/m9.figshare.5545639 .
DOI: 10.6084/m9.figshare.5701228
title: Additional file 1: of Six-monthly appointment spacing for clinical visits as a model for retention in HIV Care in Conakry-Guinea: a cohort study

description: The dataset (Additional file 1) was then exported to StataÂŽ software for statistical analysis. (XLSX 199 kb)
DOI: 10.6084/m9.figshare.5701228.v1
title: Additional file 1: of Six-monthly appointment spacing for clinical visits as a model for retention in HIV Care in Conakry-Guinea: a cohort study

description: The dataset (Additional file 1) was then exported to StataÂŽ software for statistical analysis. (XLSX 199 kb)
DOI: 10.21227/nqtd-4955
title: Optimal feature configuration for malware detection datasets

description: Datasets consiting of features extracted from API calls, network activity and Cuckoo signatures of 19994 public files of different types.
DOI: 10.6084/m9.figshare.5701216
title: Additional file 1: of The potential of Second Life for university counseling: a comparative approach examining media features and counseling problems

description: Dataset for the two proposed research questions. (XLSX 68Â kb)
DOI: 10.6084/m9.figshare.5701216.v1
title: Additional file 1: of The potential of Second Life for university counseling: a comparative approach examining media features and counseling problems

description: Dataset for the two proposed research questions. (XLSX 68Â kb)
DOI: 10.6084/m9.figshare.5701201
title: Additional file 1: of Accuracy of acute burns diagnosis made using smartphones and tablets: a questionnaire-based study among medical experts

description: Raw data for Table S4 and S6. The file contains raw data for Tables S4 and S6 with assessments of TBSA and depth for each image and participant. Participant 1 is the bedside diagnosis which is used as the gold standard for all analyses. Participant 1 was not used for reliability analyses. (XLSX 42Â kb)