cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16943116.v1
title: Staff and volunteers' perceptions of a Communication Enhanced Environment model in an acute/slow stream rehabilitation and a rehabilitation hospital ward: a qualitative description study within a before-and-after pilot study

description: A lack of social interaction during early stroke recovery can negatively affect neurological recovery and health-related quality of life of patients with aphasia following stroke. A Communication Enhanced Environment (CEE) model was developed to increase patient engagement in language activities early after stroke. This study aimed to examine staff (<i>n</i> = 20) and volunteer (<i>n</i> = 2) perceptions of a CEE model and factors influencing the implementation and use of the model. This study formed part of a broader study that developed and embedded a CEE model on two hospital wards. Six focus groups and one interview with hospital staff were conducted and analysed using a qualitative description approach. Feedback emailed by volunteers was included in the data set. Staff and volunteers perceived the CEE model benefitted themselves, the hospital system and patients. Staff identified a range of factors that influenced the implementation and use of the CEE model including individual staff, volunteer and patient factors, hospital features, the ease with which the CEE model could be used, and the implementation approach. This study provides valuable insights into staff perceptions which may inform the implementation of interventions and future iterations of a CEE model.Implications for RehabilitationA CEE model may promote efficiency and increased patient engagement in stroke rehabilitation.The CEE model information session and aphasia communication partner training, and the provision of resources, may be useful strategies to increase staff confidence in using communication supporting strategies with patients with aphasia.Behaviour change and implementation science strategies may provide a framework to address barriers and promote facilitators to embed hospital-based interventions that require individual, ward, cultural and systems level change to reduce the evidence-based gap in clinical practice. A CEE model may promote efficiency and increased patient engagement in stroke rehabilitation. The CEE model information session and aphasia communication partner training, and the provision of resources, may be useful strategies to increase staff confidence in using communication supporting strategies with patients with aphasia. Behaviour change and implementation science strategies may provide a framework to address barriers and promote facilitators to embed hospital-based interventions that require individual, ward, cultural and systems level change to reduce the evidence-based gap in clinical practice.
DOI: 10.6084/m9.figshare.21591182.v1
title: Turkish translation, cross-cultural adaptation, and assessment of psychometric properties of the Ottawa sitting scale for the intensive care unit survivors

description: To translate and cross-culturally adapt the Ottawa Sitting Scale (OSS) developed for acute care patients into Turkish and to examine its psychometric properties in intensive care unit (ICU) survivors. After translation process the Turkish version of the scale was adminstered to eighty-one patients aged 39–82 years after discharge from the ICU and videotape was recorded. Two physiotherapists watched the videotaped records during the evaluation and scored. Test-retest reliability was assesed by scoring the same video recordings 15 days after the initial scoring. Correlations of the OSS with Berg Balance Scale (BBS), Functional Independence Measurement (FIM), the ICU length of stay and, total mechanical ventilation duration were assessed for convergent validity. The intra-class correlation coefficient for inter and intra-rater reliability was 0.989–0.994 and 0.998 respectively. The internal consistency was excellent (Cronbach’s α = 0.998). The OSS score was highly correlated with the BBS total score (<i>r</i> = 0.716), the BBS unsupported sitting item score (<i>r</i> = 0.863), and moderately correlated with the total score of the FIM (<i>r</i> = 0.602), the number of days in ICU (r= −0.545), and total mechanical ventilation duration (r = −0.518). The Turkish version of OSS has been found to be valid and reliable in assessment of sitting balance in patients discharged from intensive care unit.Implications For RehabilitationPhysiotherapeutic measurements are crucial and necessary to determine the functional status of the patients.Ottawa Sitting Scale was translated and culturally adapted to Turkish and showed good psychometric propertiesOttawa Sitting Scale is valid and reliable tool to evaluate sitting balance in intensive care unit survivors.Ottawa Sitting Scale can guide clinicians in establishing evaluation and rehabilitation programs for patients discharged from intensive care unit. Physiotherapeutic measurements are crucial and necessary to determine the functional status of the patients. Ottawa Sitting Scale was translated and culturally adapted to Turkish and showed good psychometric properties Ottawa Sitting Scale is valid and reliable tool to evaluate sitting balance in intensive care unit survivors. Ottawa Sitting Scale can guide clinicians in establishing evaluation and rehabilitation programs for patients discharged from intensive care unit.
DOI: 10.6084/m9.figshare.16755107
title: Establishing consensus for the assessment of chronic pain in children and young people with cerebral palsy: a Delphi study

description: Inconsistent and inadequate pain assessment practices in cerebral palsy (CP) have resulted from a lack of standardisation of pain assessment, limited use of appropriate tools and failure to integrate disability and biopsychosocial models. To assist with improving consistency, this study aimed to establish consensus from key stakeholders regarding domains considered essential for measuring chronic pain in children and young people with CP. A modified electronic Delphi study was conducted on 83 stakeholders, including clinicians, researchers, people with CP and parents of children with CP. Participants rated 18 domains sourced from existing literature as either “core”, “recommended”, “exploratory” or “not required”. After two rounds of surveys, 12 domains were considered core: pain location, pain frequency, pain intensity, changeable factors, impact on emotional wellbeing, impact on participation, pain communication, influence on quality of life, physical impacts, sleep, pain duration and pain expression. These domains reflect the complexity of pain in a heterogeneous population where medical comorbidities are common and communication and intellectual limitations impact significantly on the ability of many to self-report. The domains will be utilised to build a framework of pain assessment specific to children and young people with CP guided by the biopsychosocial model.Implications for rehabilitationChronic pain is under-identified and poorly assessed in the cerebral palsy (CP) population.The perspectives of clinicians, researchers and consumers are vital for developing a framework for chronic pain assessment in CP.Consensus of key stakeholders found 12 domains considered essential to incorporate into a chronic pain assessment model in CP. Chronic pain is under-identified and poorly assessed in the cerebral palsy (CP) population. The perspectives of clinicians, researchers and consumers are vital for developing a framework for chronic pain assessment in CP. Consensus of key stakeholders found 12 domains considered essential to incorporate into a chronic pain assessment model in CP.
DOI: 10.6084/m9.figshare.21591182
title: Turkish translation, cross-cultural adaptation, and assessment of psychometric properties of the Ottawa sitting scale for the intensive care unit survivors

description: To translate and cross-culturally adapt the Ottawa Sitting Scale (OSS) developed for acute care patients into Turkish and to examine its psychometric properties in intensive care unit (ICU) survivors. After translation process the Turkish version of the scale was adminstered to eighty-one patients aged 39–82 years after discharge from the ICU and videotape was recorded. Two physiotherapists watched the videotaped records during the evaluation and scored. Test-retest reliability was assesed by scoring the same video recordings 15 days after the initial scoring. Correlations of the OSS with Berg Balance Scale (BBS), Functional Independence Measurement (FIM), the ICU length of stay and, total mechanical ventilation duration were assessed for convergent validity. The intra-class correlation coefficient for inter and intra-rater reliability was 0.989–0.994 and 0.998 respectively. The internal consistency was excellent (Cronbach’s α = 0.998). The OSS score was highly correlated with the BBS total score (<i>r</i> = 0.716), the BBS unsupported sitting item score (<i>r</i> = 0.863), and moderately correlated with the total score of the FIM (<i>r</i> = 0.602), the number of days in ICU (r= −0.545), and total mechanical ventilation duration (r = −0.518). The Turkish version of OSS has been found to be valid and reliable in assessment of sitting balance in patients discharged from intensive care unit.Implications For RehabilitationPhysiotherapeutic measurements are crucial and necessary to determine the functional status of the patients.Ottawa Sitting Scale was translated and culturally adapted to Turkish and showed good psychometric propertiesOttawa Sitting Scale is valid and reliable tool to evaluate sitting balance in intensive care unit survivors.Ottawa Sitting Scale can guide clinicians in establishing evaluation and rehabilitation programs for patients discharged from intensive care unit. Physiotherapeutic measurements are crucial and necessary to determine the functional status of the patients. Ottawa Sitting Scale was translated and culturally adapted to Turkish and showed good psychometric properties Ottawa Sitting Scale is valid and reliable tool to evaluate sitting balance in intensive care unit survivors. Ottawa Sitting Scale can guide clinicians in establishing evaluation and rehabilitation programs for patients discharged from intensive care unit.
DOI: 10.5281/zenodo.7341633
title: Dataset Literatur Riview on Cyberlaw and online ads

description: Ini merupakan aset dari artikel rivew cyberlaw and online ads
DOI: 10.5281/zenodo.7341632
title: Dataset Literatur Riview on Cyberlaw and online ads

description: Ini merupakan aset dari artikel rivew cyberlaw and online ads
DOI: 10.5281/zenodo.7341641
title: Data for a paper on the Mediterranean biodiversity hotspot

description: This folder contains the data to execute the code available at this link: https://github.com/JanPerret/Biodivmex_git
DOI: 10.5281/zenodo.7341640
title: Data for a paper on the Mediterranean biodiversity hotspot

description: This folder contains the data to execute the code available at this link: https://github.com/JanPerret/Biodivmex_git
DOI: 10.6084/m9.figshare.21591063
title: Estrutural Data CAZymes/Xylana

description: rcsb_data - Data from PDB alphafold_data - Data from AlphaFold Protein Structure Database personal_data - Data predicted using ColabFold
DOI: 10.6084/m9.figshare.21591063.v1
title: Estrutural Data CAZymes/Xylana

description: rcsb_data - Data from PDB alphafold_data - Data from AlphaFold Protein Structure Database personal_data - Data predicted using ColabFold
DOI: 10.6084/m9.figshare.21591206
title: Additional file 1 of Adaptation of Essential Care for Every Baby educational program to improve infant outcomes in the context of Zika

description: Additional file 1.
DOI: 10.6084/m9.figshare.21591206.v1
title: Additional file 1 of Adaptation of Essential Care for Every Baby educational program to improve infant outcomes in the context of Zika

description: Additional file 1.
DOI: 10.5281/zenodo.7341655
title: Web of Science dataset for a paper on the Mediterranean biodiversity hotspot

description: This folder contains the raw Web of Science data to execute the code available at this link: https://github.com/JanPerret/Biodivmex_git
DOI: 10.5281/zenodo.7341654
title: Web of Science dataset for a paper on the Mediterranean biodiversity hotspot

description: This folder contains the raw Web of Science data to execute the code available at this link: https://github.com/JanPerret/Biodivmex_git
DOI: 10.5281/zenodo.7253896
title: FDTD simulation of various thickness PAAO with Au NPs in different mediums (AoI 45 deg., s-polarization)

description: FDTD software: Lumerical (Ansys, version 2021 R2.3). Structure: aluminum (Palik) substrate; 230/260/290/320/350/500 nm thickness (<em>h</em>) aluminum oxide (Palik) layer with 35 nm diameter (<em>RPo</em>) cylindrical pores with 100 nm distance (<em>D</em>) between the pore centers (representing porous anodized aluminum oxide - PAAO); 60 nm diameter (<em>RNP</em>) gold (Johnson and Christy) nanoparticles (Au NPs) placed directly above each pore. Refractive index of the surrounding medium (<em>n</em>): 1.1; 1.2; 1.3. Simulation region: from 300 nm below the substrate/PAAO interface to 1.3 µm above PAAO surface; x and y spans are equal to one period of the structure. Mesh override region: from 50 nm below the PAAO to 50 nm above the nanoparticles; 2 nm step size in each direction. Light source: BFAST plane wave light source; 500 nm above PAAO; 45° angle of incidence (<em>ang</em>); 300 nm – 1000 nm wavelength range; s-polarization (<em>pol</em>). Monitor (frequency domain field and power): 2D Z-normal; 1 µm above PAAO; results are in "<em>_reflection.txt</em>" files. Information in the file name: <em>h</em> - thickness of PAAO; <em>pol</em> - polarization; <em>RNP/AuRNP</em> - diameter of gold nanoparticles; <em>RPo</em> - diameter of pores; <em>D</em> - distance between pore centers; <em>ang</em> - angle of incidence; <em>n</em> - refractive index of surrounding medium. Files: (1) "<em>_reflection.txt</em>" - lambda(nm) (first column) - wavelength in nanometers; Y (second column) - T data from the monitor above the structure. (2) "<em>_p0.log</em>" - log file produced by the software while running the simulation. (3) "<em>.fsp</em>" - Lumerical software file containing the simulation project (license required to open these files). (4) "<em>Lumerical_Screenshots.pdf</em>" - shows software screenshots for every object and its every property; red text is added to show which values are different for different simulations. (5) "<em>Structure_Illustration.png</em>" - a schematic of modeled structure. (6) "<em>.jpg</em>" - a preview of data from "<em>_reflection.txt</em>" files.
description: The research was carried out under postdoctoral project "Patterned hybrid multilayer films for optical sensors", No. 1.1.1.2/VIAA/4/20/615.
DOI: 10.5281/zenodo.7253895
title: FDTD simulation of various thickness PAAO with Au NPs in different mediums (AoI 45 deg., s-polarization)

description: FDTD software: Lumerical (Ansys, version 2021 R2.3). Structure: aluminum (Palik) substrate; 230/260/290/320/350/500 nm thickness (<em>h</em>) aluminum oxide (Palik) layer with 35 nm diameter (<em>RPo</em>) cylindrical pores with 100 nm distance (<em>D</em>) between the pore centers (representing porous anodized aluminum oxide - PAAO); 60 nm diameter (<em>RNP</em>) gold (Johnson and Christy) nanoparticles (Au NPs) placed directly above each pore. Refractive index of the surrounding medium (<em>n</em>): 1.1; 1.2; 1.3. Simulation region: from 300 nm below the substrate/PAAO interface to 1.3 µm above PAAO surface; x and y spans are equal to one period of the structure. Mesh override region: from 50 nm below the PAAO to 50 nm above the nanoparticles; 2 nm step size in each direction. Light source: BFAST plane wave light source; 500 nm above PAAO; 45° angle of incidence (<em>ang</em>); 300 nm – 1000 nm wavelength range; s-polarization (<em>pol</em>). Monitor (frequency domain field and power): 2D Z-normal; 1 µm above PAAO; results are in "<em>_reflection.txt</em>" files. Information in the file name: <em>h</em> - thickness of PAAO; <em>pol</em> - polarization; <em>RNP/AuRNP</em> - diameter of gold nanoparticles; <em>RPo</em> - diameter of pores; <em>D</em> - distance between pore centers; <em>ang</em> - angle of incidence; <em>n</em> - refractive index of surrounding medium. Files: (1) "<em>_reflection.txt</em>" - lambda(nm) (first column) - wavelength in nanometers; Y (second column) - T data from the monitor above the structure. (2) "<em>_p0.log</em>" - log file produced by the software while running the simulation. (3) "<em>.fsp</em>" - Lumerical software file containing the simulation project (license required to open these files). (4) "<em>Lumerical_Screenshots.pdf</em>" - shows software screenshots for every object and its every property; red text is added to show which values are different for different simulations. (5) "<em>Structure_Illustration.png</em>" - a schematic of modeled structure. (6) "<em>.jpg</em>" - a preview of data from "<em>_reflection.txt</em>" files.
description: The research was carried out under postdoctoral project "Patterned hybrid multilayer films for optical sensors", No. 1.1.1.2/VIAA/4/20/615.
DOI: 10.34740/kaggle/dsv/4556971
title: YouTube Trending Video Dataset (updated daily)
DOI: 10.34740/kaggle/dsv/4556986
title: 2021 World Population (updated daily)
DOI: 10.5281/zenodo.7341705
title: James et al. Short-term exposure to ciprofloxacin reduces proteoglycan loss in tendon explants DATASET

description: Dataset associated with results in the article "Short-term exposure to ciprofloxacin reduces proteoglycan loss in tendon explants".
DOI: 10.5281/zenodo.7341704
title: James et al. Short-term exposure to ciprofloxacin reduces proteoglycan loss in tendon explants DATASET

description: Dataset associated with results in the article "Short-term exposure to ciprofloxacin reduces proteoglycan loss in tendon explants".
DOI: 10.5281/zenodo.7341684
title: Spectroscopic ellipsometry measurements of DLC:Ag (samples 139, 140)

description: Spectroscopic ellipsometry measurement data obtained from the hydrogenated amorphous diamond-like carbon and silver (DLC:Ag) nanocomposite deposited on quartz (Q) and silicon (Si) substrates. DLC:Ag was deposited employing reactive unbalanced magnetron sputtering in direct current mode using silver target. Process parameters: 80 sccm argon gas flow, 5.4 sccm C<sub>2</sub>H<sub>2</sub> gas flow, 7·10<sup>-3</sup> mbar work pressure, 419-422 V or 405 V voltage (sample 139 or 140, respectively), 0.09-0.11 A or 0.09-0.10 A current (sample 139 or 140, respectively), 2 minutes 35 seconds or 2 minutes 32 seconds process duration (sample 139 or 140, respectively). The measurements were carried out at 5 locations on each sample and each substrate. Ellipsometer: rotating compensator GES5-E (Semilab). Light source: 75 W xenon short arc lamp with 185-2000 nm wavelength spectrum. Detector: UV-Vis CCD with 0.8 nm resolution. Spectral range: approximately 230-960 nm. Light incidence angles: 50°, 55°, 60°, 65°, 70°, 75°. Light beam size: microspot (365 × 470 μm<sup>2</sup> at 75° angle of incidence).
description: The research was carried out under postdoctoral project "Patterned hybrid multilayer films for optical sensors", No. 1.1.1.2/VIAA/4/20/615.
DOI: 10.5281/zenodo.7341683
title: Spectroscopic ellipsometry measurements of DLC:Ag (samples 139, 140)

description: Spectroscopic ellipsometry measurement data obtained from the hydrogenated amorphous diamond-like carbon and silver (DLC:Ag) nanocomposite deposited on quartz (Q) and silicon (Si) substrates. DLC:Ag was deposited employing reactive unbalanced magnetron sputtering in direct current mode using silver target. Process parameters: 80 sccm argon gas flow, 5.4 sccm C<sub>2</sub>H<sub>2</sub> gas flow, 7·10<sup>-3</sup> mbar work pressure, 419-422 V or 405 V voltage (sample 139 or 140, respectively), 0.09-0.11 A or 0.09-0.10 A current (sample 139 or 140, respectively), 2 minutes 35 seconds or 2 minutes 32 seconds process duration (sample 139 or 140, respectively). The measurements were carried out at 5 locations on each sample and each substrate. Ellipsometer: rotating compensator GES5-E (Semilab). Light source: 75 W xenon short arc lamp with 185-2000 nm wavelength spectrum. Detector: UV-Vis CCD with 0.8 nm resolution. Spectral range: approximately 230-960 nm. Light incidence angles: 50°, 55°, 60°, 65°, 70°, 75°. Light beam size: microspot (365 × 470 μm<sup>2</sup> at 75° angle of incidence).
description: The research was carried out under postdoctoral project "Patterned hybrid multilayer films for optical sensors", No. 1.1.1.2/VIAA/4/20/615.
DOI: 10.48557/9fjw42
title: Replication data for: ROFT: Real-time Optical Flow-aided 6D Object Pose and Velocity Tracking

description: This dataset contains the numerical data reporting the results of the algorithms: - ROFT: Real-Time Optical Flow-Aided 6D Object Pose and Velocity Tracking - PoseRBPF: A Rao-Blackwellized Particle Filter for 6D Object Pose Tracking - se(3)-TrackNet: Data-driven 6D Pose Tracking by Calibrating Image Residuals in Synthetic Domains on the Fast-YCB dataset as reported in the publication ROFT: Real-time Optical Flow-aided 6D Object Pose and Velocity Tracking.
DOI: 10.48557/g2qjdm
title: Fast-YCB Dataset

description: The Fast-YCB dataset.
DOI: 10.5281/zenodo.7341530
title: Data set related to article "PBX1-directed stem cell transcriptional program drives tumor progression in myeloproliferative neoplasm"

description: This record contains raw data related to article "PBX1-directed stem cell transcriptional program drives tumor progression in myeloproliferative neoplasm" PBX1 regulates the balance between self-renewal and differentiation of hematopoietic stem cells and maintains proto-oncogenic transcriptional pathways in early progenitors. Its increased expression was found in myeloproliferative neoplasm (MPN) patients bearing the JAK2V617F mutation. To investigate if PBX1 contributes to MPN, and to explore its potential as therapeutic target, we generated the JP mouse strain, in which the human JAK2 mutation is induced in the absence of PBX1. Typical MPN features, such as thrombocythemia and granulocytosis, did not develop without PBX1, while erythrocytosis, initially displayed by JP mice, gradually resolved over time; splenic myeloid metaplasia and in vitro cytokine independent growth were absent upon PBX1 inactivation. The aberrant transcriptome in stem/progenitor cells from the MPN model was reverted by the absence of PBX1, demonstrating that PBX1 controls part of the molecular pathways deregulated by the JAK2V617F mutation. Modulation of the PBX1-driven transcriptional program might represent a novel therapeutic approach.
DOI: 10.5281/zenodo.7341531
title: Data set related to article "PBX1-directed stem cell transcriptional program drives tumor progression in myeloproliferative neoplasm"

description: This record contains raw data related to article "PBX1-directed stem cell transcriptional program drives tumor progression in myeloproliferative neoplasm" PBX1 regulates the balance between self-renewal and differentiation of hematopoietic stem cells and maintains proto-oncogenic transcriptional pathways in early progenitors. Its increased expression was found in myeloproliferative neoplasm (MPN) patients bearing the JAK2V617F mutation. To investigate if PBX1 contributes to MPN, and to explore its potential as therapeutic target, we generated the JP mouse strain, in which the human JAK2 mutation is induced in the absence of PBX1. Typical MPN features, such as thrombocythemia and granulocytosis, did not develop without PBX1, while erythrocytosis, initially displayed by JP mice, gradually resolved over time; splenic myeloid metaplasia and in vitro cytokine independent growth were absent upon PBX1 inactivation. The aberrant transcriptome in stem/progenitor cells from the MPN model was reverted by the absence of PBX1, demonstrating that PBX1 controls part of the molecular pathways deregulated by the JAK2V617F mutation. Modulation of the PBX1-driven transcriptional program might represent a novel therapeutic approach.