cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25442/hku.15170889.v1
title: Supporting data for “Effect of Canton Herbal Tea on the toxicity of Amyloid-beta peptide in cell culture and a transgenic mouse model of Alzheimer’s Disease"

description: The supporting dataset in the result part of the thesis entitle " Effects of Canton Herbal tea on the toxicity of Amyloid-beta peptide in cell culture and a transgenic mouse model of Alzheimer's disease".<br><br>The datasets are comprised of 3 folders, which is classified as supporting data in chapter 3, chapter 4, and chapter 5. It comprised of raw data (experimental file, excel file, images), analysis data, and prism file for statistical analysis and graphs.
DOI: 10.14457/sdu.res.2017.20
title: การสังเคราะห์สารประกอบไฮโดรคาร์บอนจากน้ำมันปาล์มด้วยกระบวนการไฮโดรดีออกซิจีเนชั่นเพื่อใช้เป็นน้ำมันดีเซล
DOI: 10.14457/sdu.res.2017.32
title: การพัฒนาตำรับอาหารพื้นบ้านเสริมแคลเซียมสำหรับผู้สูงอายุไทย
DOI: 10.14457/sdu.res.2017.34
title: รูปแบบการสร้างความหลากหลายทางชีวภาพในพื้นที่ทำการเกษตรของเกษตรกรตามแนวคิดการทำเกษตรประณีตของเครือข่ายปราชญ์ชาวบ้าน ภาคตะวันออกเฉียงเหนือ
DOI: 10.12755/nrct.res.2017.39
title: การศึกษาการบริหารจัดการเทคโนโลยีการเพิ่มผลผลิตมันสำปะหลัง กรณีศึกษา ภาคตะวันออกเฉียงเหนือ (The study of technology management to increase productivity of cassava: A Case Study in the Northeast)
DOI: 10.12755/nrct.res.2017.46
title: การสังเคราะห์โครงสร้างนาโนซิงค์ออกไซด์ที่อุณหภูมิต่ำด้วยวิธีเชิงเคมีแบบใหม่ (Low temperature synthesis of ZnO nanostructures by novel chemical methods)
DOI: 10.12755/nrct.res.2017.49
title: การพัฒนาวิธีการลดขนาดการสกัดและเพิ่มความไวของการตรวจวัดสารพอลิไซคลิกอะโรมาติกไฮโดรคาร์บอน (Advances in miniaturization sample preparation and increasing sensitivity in the analysis of polycyclic aromatic hydrocarbons)
DOI: 10.12755/nrct.res.2017.50
title: พฤติกรรมวัฏภาคและสมบัติของวัสดุเชิงประกอบชีวภาพแบบอิน-ซิทู ของกรดพอลิแลกติกและพอลิเมอร์ผลึกเหลว (Phase behavior and properties of in-situ bio-based composites based on polylactic acid and liquid crystalline polymer)
DOI: 10.12755/nrct.res.2017.51
title: ระบบสะพานเติมอากาศในแหล่งน้ำห้วยคะคาง มหาวิทยาลัยราชภัฏมหาสารคาม จังหวัดมหาสารคาม (Bridge Aeration System in Huay Kha Khang Canel Rajabhat Mahasarakham University Maha Sarakham Province)
DOI: 10.12755/nrct.res.2017.54
title: การเก็บรักษาพันธุ์กล้วยไม้กุหลาบเหลืองโคราชที่อุณหภูมิต่ำกว่าจุดเยือกแข็ง (Cryopreservation of Aerides houlletiana Rchb.f)
DOI: 10.12755/nrct.res.2017.55
title: ภูมิปัญญาท้องถิ่นกับการจัดการทรัพยากรป่า กรณีศึกษาป่าชุมชนบ้านสร้างหิน ตำบลบะฮี อำเภอพรรณานิคม จังหวัดสกลนคร (A Study Local Wisdom and Forest Resource Management : A Case Studyof Sang Hin Community Forest Tam Bon Ba Hi Amphoe Phana NikhomSakon Nakhon Province)
DOI: 10.12755/nrct.res.2017.64
title: ประสิทธิภาพการย่อยวัตถุดิบอาหารต่างชนิดกันของปลาช่อนทะเล(Rachycentron canadum Linnaeus,1766) (Apparent Digestibility of Various Feed Ingredients for Cobia (Rachycentron canadum Linnaeus,1766))
DOI: 10.12755/nrct.res.2017.70
title: การประยุกต์การใช้เครื่องโฟลไซโทเมทรีในการประเมินสภาวะทางสรีรวิทยาของเชื้อClostridium beijerinckii TISTR 1461 ระหว่างการผลิตบิวทานอลจากกากน้ำตาล (Application of Flow Cytometry for Analyzing Physiological state of Clostridium beijerinckii TISTR 1461 during Butanol Production from Sugarcane molasses)
DOI: 10.12755/nrct.res.2017.71
title: ศักยภาพในการเพิ่มมูลค่าของพุทราในผลิตภัณฑ์ขนมอบ (Potential Value-Added from Jujube for Bakery Product)
DOI: 10.6084/m9.figshare.16435647
title: Data for "Aeolian sand transport over a sand surface: field investigation of the fetch effect and the conditions for saturated sand flow"

description: The field experiments were conducted on a flat sandy surface with no vegetation or other obstacles in the Aksai Desert near Dunhuang City, Gansu Province, China (39.76252° N, 94.40861° E).
DOI: 10.6084/m9.figshare.16435647.v1
title: Data for "Aeolian sand transport over a sand surface: field investigation of the fetch effect and the conditions for saturated sand flow"

description: The field experiments were conducted on a flat sandy surface with no vegetation or other obstacles in the Aksai Desert near Dunhuang City, Gansu Province, China (39.76252° N, 94.40861° E).
DOI: 10.6084/m9.figshare.16435674
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsF_2016.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsF_2016
DOI: 10.6084/m9.figshare.16435674.v1
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsF_2016.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsF_2016
DOI: 10.6084/m9.figshare.16435704.v1
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsM_2016.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsM_2016.xlsx
DOI: 10.6084/m9.figshare.16435704
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsM_2016.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsM_2016.xlsx
DOI: 10.25817/4j9m-yt03
title: Venom pharmacometrics: pharmacokinetics and pharmacodynamics of red-bellied black snake venom

description: Associated raw data for the manuscript "Pharmacokinetics and Pharmacodynamics of red-bellied black snake venom". timed venom and creatine kinase concentrations from definite red-bellied black snake bites in 114 patients. The data is in an Excel, but prepared as a datafile for NONMEM - this dataset presented in 1 CSV file, file size. Dataset is compiled from patient characteristics and serial blood samples (timed venom concentrations and CK concentrations, pre- and post- antivenom) from 114 patients (median age 41, 2-90y; 80 male) extracted from the Australian Snakebite Project database. Patients were categorised into three groups based on peak CK concentrations [no myotoxicity (<1000 U/L), mild (1000-10,000 U/L) and severe (>10,000 U/L)]. The odds of (mild or severe) myotoxicity was lower in patients that received early antivenom (within 6 hours post-bite) compared to those that received late or no antivenom (odd ratio was 0.186; 95% confidence interval, 0.052 – 0.664). A population pharmacokinetic-pharmacodynamic (PKPD) model was developed to describe the relationship between the time course of venom (a mixture of toxins) and effect (elevated CK). In addition, a kinetic-pharmacodynamic (KPD) model was developed to describe the relationship between time course of a theoretical toxin and effect. Model development and parameter estimation was performed using NONMEM v7.3. No single set of parameter values from either the PKPD or KPD models were found that could accurately describe the time course of different levels of severity of myotoxicity. The predicted theoretical toxin half-life from the KPD model was 11 ± 3.9 hours compared to the half-life of venom of 5.3 ± 0.36 hours. This indicates that the putative causative toxin’s concentration-time profile does not parallel that of venom.
DOI: 10.6084/m9.figshare.16435740
title: Fig 2_Sup Info 1 and 2 Mirror Exp_ResultTables Male.xlsx

description: Fig 2_Sup Info 1 and 2 Mirror Exp_ResultTables Male.xlsx
DOI: 10.6084/m9.figshare.16435740.v1
title: Fig 2_Sup Info 1 and 2 Mirror Exp_ResultTables Male.xlsx

description: Fig 2_Sup Info 1 and 2 Mirror Exp_ResultTables Male.xlsx
DOI: 10.6084/m9.figshare.16435752.v1
title: Fig 2_Sup Info 1 and 2 Mirror Exp_ResultTables Male.xlsx

description: Fig 2_Sup Info 1 and 2 Mirror Exp_ResultTables Male.xlsx
DOI: 10.6084/m9.figshare.16435752
title: Fig 2_Sup Info 1 and 2 Mirror Exp_ResultTables Male.xlsx

description: Fig 2_Sup Info 1 and 2 Mirror Exp_ResultTables Male.xlsx
DOI: 10.6084/m9.figshare.16435671.v1
title: Fig1 Daily activity times.xlsx

description: Fig1 Daily activity times
DOI: 10.6084/m9.figshare.16435671
title: Fig1 Daily activity times.xlsx

description: Fig1 Daily activity times
DOI: 10.6084/m9.figshare.16435749
title: Fig 2_Sup Info 1 and 2 Mirror Exp_ResultTables_Female.xlsx

description: Fig 2_Sup Info 1 and 2 Mirror Exp_ResultTables_Female.xlsx
DOI: 10.6084/m9.figshare.16435749.v1
title: Fig 2_Sup Info 1 and 2 Mirror Exp_ResultTables_Female.xlsx

description: Fig 2_Sup Info 1 and 2 Mirror Exp_ResultTables_Female.xlsx
DOI: 10.6084/m9.figshare.16435716
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsF_2107.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsF_2107.xlsx
DOI: 10.6084/m9.figshare.16435716.v1
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsF_2107.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsF_2107.xlsx
DOI: 10.6084/m9.figshare.16435677
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables Total_2016.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables Total_2016.xlsx
DOI: 10.6084/m9.figshare.16435677.v1
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables Total_2016.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables Total_2016.xlsx
DOI: 10.6084/m9.figshare.16435680
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsM_2017.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsM_2017.xlsx
DOI: 10.6084/m9.figshare.16435680.v1
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsM_2017.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsM_2017.xlsx
DOI: 10.6084/m9.figshare.16435683
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables Total_2017.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables Total_2017.xlsx
DOI: 10.6084/m9.figshare.16435683.v1
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables Total_2017.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables Total_2017.xlsx
DOI: 10.6084/m9.figshare.16435692.v1
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsM_2016.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsM_2016.xlsx
DOI: 10.6084/m9.figshare.16435692
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsM_2016.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsM_2016.xlsx
DOI: 10.6084/m9.figshare.16435695.v1
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsM_2017.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsM_2017.xlsx
DOI: 10.6084/m9.figshare.16435695
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsM_2017.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables FvsM_2017.xlsx
DOI: 10.6084/m9.figshare.16435707
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsF_2016.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsF_2016.xlsx
DOI: 10.6084/m9.figshare.16435707.v1
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsF_2016.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsF_2016.xlsx
DOI: 10.6084/m9.figshare.16435713
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsF_2017.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsF_2017.xlsx
DOI: 10.6084/m9.figshare.16435713.v1
title: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsF_2017.xlsx

description: Fig 2_Sup Info 1 and 2 Conspec Stimulus Exp_ResultTables MvsF_2017.xlsx
DOI: 10.6084/m9.figshare.16435788
title: Additional file 2 of Smoking induces sex-specific changes in the small airway proteome

description: Additional file 2: Table S1. List of 203 proteins with RFU values &gt; LOD in more than 50% of the samples that was used for further analysis. Table S2. Proteins significantly altered in current smokers as compared to never smokers in the joint model.
DOI: 10.6084/m9.figshare.16435788.v1
title: Additional file 2 of Smoking induces sex-specific changes in the small airway proteome

description: Additional file 2: Table S1. List of 203 proteins with RFU values &gt; LOD in more than 50% of the samples that was used for further analysis. Table S2. Proteins significantly altered in current smokers as compared to never smokers in the joint model.
DOI: 10.6084/m9.figshare.16435870
title: Additional file 1 of Small-scale sequencing enables quality assessment of Ribo-Seq data: an example from Arabidopsis cell culture

description: Additional file 1: Table S1. Biotinylated rRNA depletion probes. Table S2. List of rRNA databases used with SortMeRNA for rRNA removal. Table S3. Arabidopsis rRNA fasta file added to the SortMeRNA database. Table S4. Mapping quality comparison between bowtie 2 and kallisto. Table S5. Library amplification primers. Figure S1. Gel images of the library construction procedure. Figure S2. The rRNA compositions of the libraries. Figure S3. Genome browser (IGB) view of a randomly selected region. Figure S4. Ribo-Seq QC analysis of T0-2 and T0-3 data. Figure S5. Meta-gene heatmap of T0-2 and T0-3 data. Figure S6. The RPF profiles of the two most abundant transcripts.
DOI: 10.6084/m9.figshare.16435870.v1
title: Additional file 1 of Small-scale sequencing enables quality assessment of Ribo-Seq data: an example from Arabidopsis cell culture

description: Additional file 1: Table S1. Biotinylated rRNA depletion probes. Table S2. List of rRNA databases used with SortMeRNA for rRNA removal. Table S3. Arabidopsis rRNA fasta file added to the SortMeRNA database. Table S4. Mapping quality comparison between bowtie 2 and kallisto. Table S5. Library amplification primers. Figure S1. Gel images of the library construction procedure. Figure S2. The rRNA compositions of the libraries. Figure S3. Genome browser (IGB) view of a randomly selected region. Figure S4. Ribo-Seq QC analysis of T0-2 and T0-3 data. Figure S5. Meta-gene heatmap of T0-2 and T0-3 data. Figure S6. The RPF profiles of the two most abundant transcripts.
DOI: 10.6084/m9.figshare.16435923.v1
title: Additional file 1 of Sex dependent glial-specific changes in the chromatin accessibility landscape in late-onset Alzheimer’s disease brains

description: Additional file 1 : Supplementary Table 1. Demographic and sample information of all 51 patients analyzed. Supplementary Table 2. Demographic and sample information of group of 40 paired, 9 unpaired. *Donor tissue used for snRNA-seq. Supplementary Table 3. GREAT analysis of Top 5000 differential sites for Level 1 analysis. Supplementary Table 4. HOMER Motif search result of top 5000 sites more accessible in neuron and non-neuron. Supplementary Table 5. Demographic information for bulk ATAC-seq tissue samples. Supplementary Table 6. Differential analysis of Whole tissue vs neuron/non-neuron mixed. Terms in blue represent association with glial function and the ones in red represent association with neuronal function. Terms in green represent association with general brain function. GO terms enriched in DE sites of non-neuron vs whole tissue. Supplementary Table 7. GO terms enriched in DE sites of neuron vs whole tissue. Supplementary Table 8. GO terms enriched in sites more accessible in mixed neuron/non-neuron vs whole tissue. Supplementary Table 9. GO term enrichment of LOAD down differential sties in female glia controls vs. cases, FDR
DOI: 10.6084/m9.figshare.16435923
title: Additional file 1 of Sex dependent glial-specific changes in the chromatin accessibility landscape in late-onset Alzheimer’s disease brains

description: Additional file 1 : Supplementary Table 1. Demographic and sample information of all 51 patients analyzed. Supplementary Table 2. Demographic and sample information of group of 40 paired, 9 unpaired. *Donor tissue used for snRNA-seq. Supplementary Table 3. GREAT analysis of Top 5000 differential sites for Level 1 analysis. Supplementary Table 4. HOMER Motif search result of top 5000 sites more accessible in neuron and non-neuron. Supplementary Table 5. Demographic information for bulk ATAC-seq tissue samples. Supplementary Table 6. Differential analysis of Whole tissue vs neuron/non-neuron mixed. Terms in blue represent association with glial function and the ones in red represent association with neuronal function. Terms in green represent association with general brain function. GO terms enriched in DE sites of non-neuron vs whole tissue. Supplementary Table 7. GO terms enriched in DE sites of neuron vs whole tissue. Supplementary Table 8. GO terms enriched in sites more accessible in mixed neuron/non-neuron vs whole tissue. Supplementary Table 9. GO term enrichment of LOAD down differential sties in female glia controls vs. cases, FDR
DOI: 10.6084/m9.figshare.16435953.v1
title: Additional file 1 of A novel plant-fungal association reveals fundamental sRNA and gene expression reprogramming at the onset of symbiosis

description: Additional file 1. Supporting individual data values displayed in Figure 1a-c and Additional File 2: Figure S5.
DOI: 10.6084/m9.figshare.16435953
title: Additional file 1 of A novel plant-fungal association reveals fundamental sRNA and gene expression reprogramming at the onset of symbiosis

description: Additional file 1. Supporting individual data values displayed in Figure 1a-c and Additional File 2: Figure S5.
DOI: 10.6084/m9.figshare.16435972.v1
title: Additional file 1 of Cerebral cortex and blood transcriptome changes in mouse neonates prenatally exposed to air pollution particulate matter

description: Additional file 1: Supplementary file 1. Differential expression analysis summary statistics.
DOI: 10.6084/m9.figshare.16435965
title: Additional file 10 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 10. Read count data before and after selections for growth in axenic culture or on bacteria. Normalised read count data is shown for each detectable insertion mutants for each replicate of each condition, as well as log fold change values from the starting read count before the selections.
DOI: 10.6084/m9.figshare.16435968
title: Additional file 11 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 11. List of mutations and associated genes that affect growth on bacteria or in axenic medium when disrupted.
DOI: 10.6084/m9.figshare.16435968.v1
title: Additional file 11 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 11. List of mutations and associated genes that affect growth on bacteria or in axenic medium when disrupted.
DOI: 10.6084/m9.figshare.16435965.v1
title: Additional file 10 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 10. Read count data before and after selections for growth in axenic culture or on bacteria. Normalised read count data is shown for each detectable insertion mutants for each replicate of each condition, as well as log fold change values from the starting read count before the selections.
DOI: 10.6084/m9.figshare.16435971.v1
title: Additional file 12 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 12. Growth competitions and fluid uptake assays data
DOI: 10.6084/m9.figshare.16435971
title: Additional file 12 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 12. Growth competitions and fluid uptake assays data
DOI: 10.6084/m9.figshare.16435980
title: Additional file 1 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 1. Lookup table for all possible insertion sites in the D. discoideum genome. Using the complete genome sequences of Dictyostelium discoideum the positions of all DpnII (GATC) and NlaIII (CATG) sites were identified as well as 20 bp up- and downstream of the recognition sites (genomic tags; Tab 1). Then, the number of occurrences of each tag in the genome as well as the location within or between genes was determined using this lookup table and the annotation File obtained from dictyBase. On top of this, the number of possible insertion sites was determined for each annotated gene (13,411; Tab 2) and all promoter regions (1,000 bp before the start codon). A short summary can be found in Tab 3.
DOI: 10.6084/m9.figshare.16435977
title: Additional file 14 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 14. GO term analysis of genes associated with growth in axenic culture or on bacteria
DOI: 10.6084/m9.figshare.16435980.v1
title: Additional file 1 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 1. Lookup table for all possible insertion sites in the D. discoideum genome. Using the complete genome sequences of Dictyostelium discoideum the positions of all DpnII (GATC) and NlaIII (CATG) sites were identified as well as 20 bp up- and downstream of the recognition sites (genomic tags; Tab 1). Then, the number of occurrences of each tag in the genome as well as the location within or between genes was determined using this lookup table and the annotation File obtained from dictyBase. On top of this, the number of possible insertion sites was determined for each annotated gene (13,411; Tab 2) and all promoter regions (1,000 bp before the start codon). A short summary can be found in Tab 3.
DOI: 10.6084/m9.figshare.16435974.v1
title: Additional file 13 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 13. Differential gene expression analysis on axenic vs bacterial growth
DOI: 10.6084/m9.figshare.16435974
title: Additional file 13 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 13. Differential gene expression analysis on axenic vs bacterial growth
DOI: 10.6084/m9.figshare.16435977.v1
title: Additional file 14 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 14. GO term analysis of genes associated with growth in axenic culture or on bacteria
DOI: 10.6084/m9.figshare.16435989.v1
title: Additional file 4 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 4. Table of individual mutants present in the REMI grid. Individual mutants were identified in 96-well plates using the REMI-seq technique (see methods). To identify the exact insertion points, the extracted tags were compared to the lookup table. The unique indices at the end of the inserts also allowed the determination of the vector version (p-GWDI G1 – G5; C6 – C8) as well as the orientation of the insert.
DOI: 10.6084/m9.figshare.16435986
title: Additional file 3 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 3. Indices present in different p-GWDI plasmids and Illumina adapter sequences. The ends of both arms contain indices specific for each arm and plasmid. p-GWDI G1, G2, G3 and G5 have GATC sticky ends and p-GWDI C4, C6, C7, C8 have CATG sticky ends.
DOI: 10.6084/m9.figshare.16435986.v1
title: Additional file 3 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 3. Indices present in different p-GWDI plasmids and Illumina adapter sequences. The ends of both arms contain indices specific for each arm and plasmid. p-GWDI G1, G2, G3 and G5 have GATC sticky ends and p-GWDI C4, C6, C7, C8 have CATG sticky ends.
DOI: 10.6084/m9.figshare.16435995
title: Additional file 5 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology

description: Additional file 5. Analyses of frequency of gene disruptions per site. Genes were grouped according to the number of possible insertions sites. The expected number of insertions for each gene was calculated based on a Poisson process and compared to the observed number of insertions in each gene.