cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.qb6v87h/22
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the moss Plagiothecium denticulatum

description: nDNA and cpDNA sequence data from Ledent et al. (Ecology Letters, in press) If you use the data in this file, please cite the original publication: Ledent, A., Désamoré, A., Laenen, B., Mardulyn, P., McDaniel, S.F., Zanatta, F., (…) & Vanderpoorten, A. (2019) No borders during the post-glacial assembly of European bryophytes. Ecology Letters, in press.
DOI: 10.5061/dryad.qb6v87h/23
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the moss Plagiothecium undulatum

description: nDNA and cpDNA sequence data from Ledent et al. (Ecology Letters, in press) If you use the data in this file, please cite the original publication: Ledent, A., Désamoré, A., Laenen, B., Mardulyn, P., McDaniel, S.F., Zanatta, F., (…) & Vanderpoorten, A. (2019) No borders during the post-glacial assembly of European bryophytes. Ecology Letters, in press.
DOI: 10.5061/dryad.qb6v87h/24
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the moss Pleurochaete squarrosa

description: cpDNA sequence data from Grundmann et al. (2007, Molecular Ecology, 16, 709–722) If you use the data in this file, please cite the original publication: Grundmann, M., Ansell, S.W., Russell, S.J., Koch, M.A., & Vogel, J.C. (2007) Genetic structure of the widespread and common Mediterranean bryophyte Pleurochaete squarrosa (Brid.) Lindb. (Pottiaceae) — evidence from nuclear and plastidic DNA sequence variation and allozymes. Molecular Ecology, 16, 709–722.
DOI: 10.5061/dryad.qb6v87h/25
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the moss Pleurochaete squarrosa

description: ITS sequence data from Grundmann et al. (2007, Molecular Ecology, 16, 709–722). If you use the data in this file, please cite the original publication: Grundmann, M., Ansell, S.W., Russell, S.J., Koch, M.A., & Vogel, J.C. (2007) Genetic structure of the widespread and common Mediterranean bryophyte Pleurochaete squarrosa (Brid.) Lindb. (Pottiaceae) — evidence from nuclear and plastidic DNA sequence variation and allozymes. Molecular Ecology, 16, 709–722.
DOI: 10.5061/dryad.qb6v87h/26
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the moss Pleurozium schreberi

description: Nuclear microsatellite data from Korpelainen H. et al. (2012, International Journal of Plant Sciences, 173, 1015–1022). If you use the data in this file, please cite the original publication: Korpelainen, H., Forsman, H., Virtanen, V., Pietiläinen, M., & Kostamo, K. (2012) Genetic composition of bryophyte populations occupying habitats differing in the level of human disturbance. International Journal of Plant Sciences, 173, 1015–1022.
DOI: 10.5061/dryad.qb6v87h/27
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the moss Rhytidiadelphus squarrosus

description: Nuclear microsatellite data from Korpelainen H. et al. (2012, International Journal of Plant Sciences, 173, 1015–1022). If you use the data in this file, please cite the original publication: Korpelainen, H., Forsman, H., Virtanen, V., Pietiläinen, M., & Kostamo, K. (2012) Genetic composition of bryophyte populations occupying habitats differing in the level of human disturbance. International Journal of Plant Sciences, 173, 1015–1022.
DOI: 10.5061/dryad.qb6v87h/28
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the moss Scorpiurium circinatum

description: nDNA and cpDNA sequence data from Ledent et al. (Ecology Letters, in press) If you use the data in this file, please cite the original publication: Ledent, A., Désamoré, A., Laenen, B., Mardulyn, P., McDaniel, S.F., Zanatta, F., (…) & Vanderpoorten, A. (2019) No borders during the post-glacial assembly of European bryophytes. Ecology Letters, in press.
DOI: 10.5061/dryad.qb6v87h/29
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the moss Timmia bavarica

description: nDNA and cpDNA sequence data from Ledent et al. (Ecology Letters, in press) If you use the data in this file, please cite the original publication: Ledent, A., Désamoré, A., Laenen, B., Mardulyn, P., McDaniel, S.F., Zanatta, F., (…) & Vanderpoorten, A. (2019) No borders during the post-glacial assembly of European bryophytes. Ecology Letters, in press.
DOI: 10.5061/dryad.qb6v87h/30
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the moss Timmia austriaca

description: nDNA and cpDNA sequence data from Ledent et al. (Ecology Letters, in press) If you use the data in this file, please cite the original publication: Ledent, A., Désamoré, A., Laenen, B., Mardulyn, P., McDaniel, S.F., Zanatta, F., (…) & Vanderpoorten, A. (2019) No borders during the post-glacial assembly of European bryophytes. Ecology Letters, in press.
DOI: 10.5061/dryad.t952j0k/1
title: Field common garden experiment
DOI: 10.5061/dryad.t952j0k/2
title: Field survey for leaf damage percent
DOI: 10.5061/dryad.t952j0k/3
title: Field survey for seedlings density
DOI: 10.5061/dryad.t952j0k/4
title: Greenhouse experiment for seed germination and seeddling survival
DOI: 10.5061/dryad.vk8ms62/1
title: Segmentation algorithm for seasonal cycle analyses

description: This file contains a permanent version of the R code for the segmentation algorithm for seasonal cycle analyses of atmospheric carbon dioxide. A PDF manual with descriptions is available in the subdirectory ./man. Code is heavily annotated and available in the subdirectory ./R. Install instructions are in the README.md file. Any additional updates to the algorithm will be available in GitHub at , but a version is available in this repository for posterity.
DOI: 10.17632/53k5rg87s4.1
title: Data for: Formation of Magic Gold Fingers Under Mild and Relevant Experimental Conditions

description: These are the materials and methods for the process of forming magic gold fingers under mild and relevant experimental conditions.
DOI: 10.17632/6n7f5cnwyr.1
title: Data for: Genistein reverses isoproterenol-induced cardiac hypertrophy by regulating miR-451/TIMP2
DOI: 10.17632/wktgzkvcfn.1
title: Data for: 3341582

description: A database is composed of a variety of financial instruments used during the master thesis.
DOI: 10.5061/dryad.2806394/1
title: Bird and mammal detection data and site covariates

description: We provide the detection histories for 15 mammal and 44 bird species at 210 sites in the Mojave Desert ecoregion of California, as well as the site covariates that we used in the multispecies occupancy models. The code that uses this data can be found in Appendix S2.
DOI: 10.5061/dryad.280t270/1
title: Wilson93Light

description: Light penetration data in prairie and aspen forest.
DOI: 10.5061/dryad.280t270/2
title: Wilson93Nitrogen

description: Soil available nitrogen in prairie and aspen forest.
DOI: 10.5061/dryad.280t270/3
title: Wilson93Roots

description: Root mass data in prairie and aspen forest.
DOI: 10.5061/dryad.280t270/4
title: Wilson93StandingCrop

description: Standing crop and species composition data in prairie and aspen forest understory.
DOI: 10.5061/dryad.280t270/5
title: Wilson93Transplants

description: Transplant biomass data in prairie and aspen forest.
DOI: 10.5061/dryad.280t270/6
title: Wilson93Trees

description: Data describing neighboring tree sizes, used to estimate mass in aspen forest..
DOI: 10.5061/dryad.280t270/7
title: Wilson93Water

description: Soil water content (gravimetric) in prairie and aspen forest.
DOI: 10.5061/dryad.28d5v76/1
title: Step-selection function dataset

description: This dataset includes used and available locations for the Step-Selection Function analyses. Additional variables includes topographic roughness (TRI) and vegetation openness (open) as well as wolf (wolf_5hr) and male (male_cat) and female (fem_cat) activity schedules at the corresponding hour of day. Original elk GPS data can be downloaded here: DOI: https://doi.org/10.5061/dryad.mr0rg45.2/1.2
DOI: 10.5061/dryad.28d5v76/2
title: Activity Schedules

description: This includes the activity schedule by hour for both wolves (wolf_5hr) and male (Male_cat) and female (Fem_cat) cougars. Values were calculated from a generalized additive mixed model. See manuscript for methods.
DOI: 10.5061/dryad.3pj6958/1
title: Appendix_S1

description: Fish taxa, and associated features, used in the study.
DOI: 10.5061/dryad.403j5s4/1
title: AFLP scoring for sampled individuals of Orinus

description: The binary (presence/absence) scoring of AFLP bands for sampled individuals of Orinus. The bands were scored in GeneScan 3.1. Within the spreadsheet, the first letter in the sample number in column one refers to the species so that T=O. thoroldii, I=O. intermedius, K=O. kokonoricus, and other numbers and letters yield unique designations. The population numbers in column two correspond with those in Figure 1 in the main text of our publication.
DOI: 10.5061/dryad.4bq41sg/3
title: Trap deployment data for cover board array in Site 2, Session 1

description: Data frame containing information of each trap and their corresponding session, site, and day covariate
DOI: 10.5061/dryad.4bq41sg/4
title: Trap deployment data for cover board array in Site 3, Session 1

description: Data frame containing information of each trap and their corresponding session, site, and day covariate
DOI: 10.5061/dryad.4bq41sg/5
title: Trap deployment data for cover board array in Site 1, Session 2

description: Data frame containing information of each trap and their corresponding session, site, and day covariate
DOI: 10.5061/dryad.4bq41sg/6
title: Trap deployment data for cover board array in Site 2, Session 2

description: Data frame containing information of each trap and their corresponding session, site, and day covariate
DOI: 10.5061/dryad.4bq41sg/7
title: Trap deployment data for cover board array in Site 3, Session 2

description: Data frame containing information of each trap and their corresponding session, site, and day covariate
DOI: 10.5061/dryad.4bq41sg/8
title: R codes for running red-backed salamander spatial capture-recapture analysis using package oSCR
DOI: 10.5061/dryad.4m6j54g/1
title: Condensin BLAST alignments

description: Contains results of BLAST searches against contig DNA for all species analyzed in this paper. Data is subdivided by order, with additional subsections for condensin subunit sequences from species used as bait. “Lost subunits” subsection indicates subunits that were missed in the initial searches performed with standard bait sequences and were redone with close relative sequences, sometimes revealing hits.
DOI: 10.5061/dryad.4m6j54g/2
title: Duplication alignments

description: This folder contains full results and alignments for BLAST searches looking for compensatory duplications in condensin I subunits.
DOI: 10.5061/dryad.4m6j54g/3
title: Condensin PAML

description: Contains data relating to positive selection analysis, including the PAML control file, all alignments, species lists, and max dS and average dN/dS information.
DOI: 10.5061/dryad.4pg1vv4/1
title: Bream_genepop_dat

description: This Genepop format file includes genotypes for 8 samples totalling 642 red sea bream (Pagrus major) from six geographical regions  collected between 2002 and 2011 (497 wild, 45 hatchery, and 100 farmed fish).
DOI: 10.5061/dryad.5hs7h37/1
title: Plant shoot biomass data
DOI: 10.5061/dryad.68ct8kc/1
title: Results of song analyses and playback experiments from “Symmetrical discrimination despite weak song differentiation in two Suboscine sister species”

description: Spreadsheet in .xlsx format containing two tabs. One tab shows results of the analyses conducted in Raven Pro 1.4 comparing male songs of the Squamate Antbird (Myrmoderus squamosus) and the White-bibbed Antbird (Myrmoderus loricatus). Frequency variables are expressed in Hertz (Hz) and temporal variables are expressed in seconds. The second tab shows the results of playback experiments testing specific recognition between males of these species. We tested 30 males per species; 10 males in each of three treatments: conspecific song (Squamate Antbird male songs to Squamate Antbird males and White-bibbed Antbird male songs to White-bibbed Antbird males), heterospecific song (Squamate Antbird male songs to White-bibbed Antbird males and White-bibbed Antbird male songs to Squamate Antbird males) and control songs (Star-throated Antwren male songs). Temporal variables are expressed in seconds.
DOI: 10.5061/dryad.7f14jt7/1
title: Masterparameter_values

description: Raw values used in calculations of all parameters
DOI: 10.5061/dryad.8ts2867/10
title: assembly

description: The zip file contains a reference assembly using MaSuRcA and a gff file with annotations from MAKER
DOI: 10.5061/dryad.8ts2867/9
title: VCF file

description: This file is the final gzipped VCF file after filtering for all the individuals used in this study.
DOI: 10.5061/dryad.8ts30t5/4
title: Highly undersaturated seawater (omega 0.78) - decay

description: File contains 5 folders with the reconstructed CT data (*.DICOM format) and scan set-up information (*.pca format) for the 5 decaying specimens of L.helicina antarctica incubated for 13 days in seawater adjusted to an aragonite saturation of 0.78
DOI: 10.5061/dryad.b3s4v0g/13
title: Gavialis mandible bilateral posterior

description: Abaqus input file of Gavialis mandible simulating a bilateral posterior bite.
DOI: 10.5061/dryad.b3s4v0g/14
title: Gavialis mandible unilateral anterior

description: Abaqus input file of Gavialis mandible simulating an unilateral anterior bite.
DOI: 10.5061/dryad.b3s4v0g/15
title: Gavialis mandible unilateral posterior

description: Abaqus input file of Gavialis mandible simulating an unilateral posterior bite.
DOI: 10.5061/dryad.b3s4v0g/16
title: Pelagosaurus cranium bilateral anterior

description: Abaqus input file of Pelagosaurus cranium simulating a bilateral anterior bite.
DOI: 10.5061/dryad.b3s4v0g/17
title: Pelagosaurus cranium bilateral middle

description: Abaqus input file of Pelagosaurus cranium simulating a bilateral middle bite.
DOI: 10.5061/dryad.b3s4v0g/18
title: Pelagosaurus cranium bilateral posterior

description: Abaqus input file of Pelagosaurus cranium simulating a bilateral posterior bite.
DOI: 10.5061/dryad.b3s4v0g/19
title: Pelagosaurus cranium unilateral anterior

description: Abaqus input file of Pelagosaurus cranium simulating an unilateral anterior bite.
DOI: 10.5061/dryad.b3s4v0g/20
title: Pelagosaurus cranium unilateral posterior

description: Abaqus input file of Pelagosaurus cranium simulating an unilateral posterior bite.
DOI: 10.5061/dryad.bj486f4/1
title: SocioDemographic

description: Socio-demographic and clinical information of included participants
DOI: 10.5061/dryad.bj486f4/2
title: Thalamus

description: WMD and PC values for the thalamus for the entire sample
DOI: 10.5061/dryad.bj486f4/3
title: Cortex_WMD

description: WMD values for the cortical parcels for the entire sample
DOI: 10.5061/dryad.bj486f4/4
title: Cortex_PC

description: PC values for the cortical parcels for the entire sample
DOI: 10.5061/dryad.bj486f4/6
title: Additional Figures and Tables

description: Additional Figures 1-3, Additional Tables 1-2 (referenced from main manuscript)
DOI: 10.5061/dryad.bt5rc79/1
title: Cover and heterocyst data

description: Cyanobacterial cover and heterocyst frequency for each treatment.
DOI: 10.5061/dryad.bt5rc79/2
title: Raw isotope data

description: Raw data from stable isotope analyses (C and N) used for fixation calculations
DOI: 10.5061/dryad.dn4676s.1
title: Data from: Analysis-ready datasets for insecticide resistance phenotype and genotype frequency in African malaria vectors
DOI: 10.5061/dryad.dn4676s.1/1.1
title: 1. standard WHO susceptibility test results for species complex and subgroup samples
DOI: 10.5061/dryad.dn4676s.1/2.1
title: 2. standard WHO susceptibility test results for single species
DOI: 10.5061/dryad.dn4676s.1/3.1
title: 3. standard CDC bottle bioassay results for species complex and subgroup samples
DOI: 10.5061/dryad.dn4676s.1/4.1
title: 4. paired synergist bioassay results for species complex and subgroup samples
DOI: 10.5061/dryad.dn4676s.1/5.1
title: 5. intensity bioassay results for species complex and subgroup samples
DOI: 10.5061/dryad.dn4676s.2/6.2
title: 6. Vgsc allele frequencies for species complex and subgroup samples
DOI: 10.5061/dryad.dn4676s.2/7.2
title: 7. Vgsc allele frequencies for single species
DOI: 10.5061/dryad.dn4676s.2/8.2
title: 8. paired Vgsc allele frequencies from dead and surviving mosquitoes after insecticide exposure
DOI: 10.5061/dryad.j01ph32/3
title: Phylip4Diploids
DOI: 10.5061/dryad.j01ph32/8
title: SFigures

description: Supplementary Figures
DOI: 10.5061/dryad.j01ph32/9
title: SupplementaryTables

description: Supplementary Tables
DOI: 10.5061/dryad.kj2pb/1
title: De novo reference genome
DOI: 10.5061/dryad.kj2pb/2
title: variants_6taxa_fileA.vcf

description: The complete .vcf file need to be concatenated including the files: variants_6taxa_fileA.vcf.gz, variants_6taxa_fileB.vcf.gz, and variants_6taxa_fileC.vcf.gz.

Concatenate the files and extract as follows: 
$ cat variants_6taxa_file*.vcf.gz &gt; variants_6taxa_file.vcf.gz
$ gunzip variants_6taxa_file.vcf.gz
DOI: 10.5061/dryad.m20hf10/1
title: RScript_JAE_Naniwadekar_etal

description: The R script that was used for data analysis
DOI: 10.5061/dryad.m20hf10/2
title: JAE_Naniwadekar_etal_species_codes

description: Contains details of codes assigned to different plant and frugivore species across the different data files
DOI: 10.5061/dryad.m20hf10/3
title: dat_species_accum_samples

description: contains data that was used to plot frugivore species accumulation curves
DOI: 10.5061/dryad.m20hf10/4
title: dat_pakke_weight_network_bird_disp

description: contains visitation rate data of different frugivore species on different tree species that was used to construct the plant-disperser network
DOI: 10.5061/dryad.m20hf10/5
title: dat_gw_fw_final

description: contains data of gape width of different frugivore species and the average diameter (width) of fruit species eaten by them
DOI: 10.5061/dryad.m20hf10/6
title: dat_correl_species_level_gw

description: contains data of gape width of different frugivore species and degree, species strength, betweenness centrality and closeness centrality measures for each of the different species as extracted from each of the different frugivore species
DOI: 10.5061/dryad.qb6v87h/31
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the liverwort Metzgeria furcata

description: cpDNA sequence data from Ledent et al. (Ecology Letters, in press) If you use the data in this file, please cite the original publication: Ledent, A., Désamoré, A., Laenen, B., Mardulyn, P., McDaniel, S.F., Zanatta, F., (…) & Vanderpoorten, A. (2019) No borders during the post-glacial assembly of European bryophytes. Ecology Letters, in press.
DOI: 10.5061/dryad.qb6v87h/32
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the moss Orthotrichum affine

description: nDNA and cpDNA sequence data from Ledent et al. (Ecology Letters, in press) If you use the data in this file, please cite the original publication: Ledent, A., Désamoré, A., Laenen, B., Mardulyn, P., McDaniel, S.F., Zanatta, F., (…) & Vanderpoorten, A. (2019) No borders during the post-glacial assembly of European bryophytes. Ecology Letters, in press.
DOI: 10.5061/dryad.qb6v87h/33
title: Geographic coordinates and genotype data for the analysis of the spatial genetic structure of the moss Orthotrichum lyellii

description: nDNA and cpDNA sequence data from Ledent et al. (Ecology Letters, in press) If you use the data in this file, please cite the original publication: Ledent, A., Désamoré, A., Laenen, B., Mardulyn, P., McDaniel, S.F., Zanatta, F., (…) & Vanderpoorten, A. (2019) No borders during the post-glacial assembly of European bryophytes. Ecology Letters, in press.
DOI: 10.5061/dryad.sn314pt/1
title: Fang Sharpness Data

description: Specimen morphology and FI data for first set of fang tests, second set of fang tests, and punch tests
DOI: 10.5061/dryad.tb214n0/1
title: Komo2019_AggregationStudy

description: Data to laboratory experiments of the aggregation study; data files created with Microsoft Excel; description in README file
DOI: 10.5061/dryad.tb214n0/2
title: Komo2019_DevelopmentalStudy

description: Data to laboratory experiments of the developmetnal study; data files created with Microsoft Excel; description in README file
DOI: 10.5061/dryad.vf24rg4/1
title: Southern_Andes_July2

description: Worksheet with tree ring width measurements of individual trees belonging to several treeline locations in the Southern Andes.
DOI: 10.5061/dryad.vn12t0t/1
title: Distribution data matrix

description: Data base based on a comprehensive literature review and &gt;5,000 records obtained from biological collections (first sheet). The presence-absence matrix including 61 latitudinal bands (2° each) along the Eastern Pacific (60N – 60S) (second sheet). Using this data matrix we estimated species richness, distribution range and range endpoints at each band.
DOI: 10.6084/m9.figshare.12980744
title: R0192_20171021a_videos

description: Rat 0192, skilled reaching data collected in Leventhal laboratory by Alexandra Bova
DOI: 10.17632/7d2thd7dpr.1
title: Data for: Localized grain scale processes recorded by large oxygen isotope variations in olivine-hosted melt inclusions from two MORB samples

description: Full characterization of olivine hosted melt inclusions from two MORB samples (major, volatiles, and trace elements of melt inclusions, oxygen isotopes of melt inclusions and olivine, Fo content of olivines) Also, SIMS analytical conditions used for volatiles and trace elements and oxygen isotopes.
DOI: 10.17632/b95j2h7cbx.1
title: Data for: Silica/montmorillonite nanoarchitectures and Layered Double Hydroxide-SPEEK based composite membranes for fuel cells applications

description: nanocomposite monmorillonite and membranes for direct methanol fuel cells
DOI: 10.17632/pwhrk2348j.1
title: Data for: Mono and Co-Substitution of Sr2+ and Ca2+ on the Structural, Electrical and Optical Properties of Barium Titanate Ceramics
DOI: 10.5061/dryad.3708bv1/1
title: Raw data Di Lelio et al., 2019

description: Numerical data that underlies tables and graphs (figures 1-7, 9, 10; table 1) and statistics of the PLOS Genetics article from di Lelio et al., 2019.
DOI: 10.5061/dryad.5v3s28v/1
title: Captive Eidolon helvum serology

description: Sample dates, bat ID numbers, and NiVsG mean fluorescence index (MFI) values from Luminex assays applied to blood samples from captive Eidolon helvum.
DOI: 10.5061/dryad.6s7d02q/1
title: VCF file (gzipped)

description: VCF file containing data for 1286 individuals and 12666 loci. Minor allele frequency cut-off of 0.05 was used, and at least 60% of individuals have data at each retained site. Loci with &gt;2 alternative alleles are excluded.
DOI: 10.5061/dryad.6s7d02q/2
title: entropy input file

description: Input file for entropy including 1286 individuals and 12666 loci. Data are in genotype likelihood form - this file was made by simplifying a VCF using the script vcf2mpgl.pl
DOI: 10.5061/dryad.6s7d02q/3
title: script for converting vcf to mpgl

description: This perl script converts VCF output to mpgl format, a simplified version of genotype likelihoods that forms the input for the entropy clustering analysis
DOI: 10.5061/dryad.6s7d02q/4
title: Script for environmental correlates of hybridization outcomes

description: This script does the model averaging described in the paper and displayed in Fig. 5.
DOI: 10.5061/dryad.6s7d02q/5
title: Response variable data for model averaging

description: Response variables summarizing genomic outcomes of hybridization across 27 locations in the North Fork Shoshone River basin