cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/js6vj-1tg10
title: MT310_xyl(+)_metal(-)

description: Raw data files of MT310_xyl(+)_metal(-)
description: <strong>Tilt Series Date:</strong> 2009-06-21</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach</p>
<strong>Collaborators and Roles:</strong> The MT310 strain was constructed by Martin Thanbichler; cell cultured and treated by Zhuo Li; data collected and processed by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> MT310 cells were induced with xylose for 20 hours. No metal salt was added. </p>
<strong>Sample Preparation:</strong> 10 nm gold. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-21-11/rawdata/</p>09jun21a_Ctlnomet_015.mrc,  Tilt Series (Pixel Size 0.95 nm), 704.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-21-11/rawdata/09jun21a_Ctlnomet_015.mrc"
        > <i class="download icon"></i> Download </a></p>

        09jun21a_Ctlnomet_015_full.rec,  Reconstruction (Pixel Size 1.9 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-21-11/3dimage_4878/09jun21a_Ctlnomet_015_full.rec"
        > <i class="download icon"></i> Download </a></p>

        09jun17a_A22c_016.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-21-11/rawdata/09jun17a_A22c_016.mrc"
        > <i class="download icon"></i> Download </a></p>

        09jun17a_A22c_016_part.rec,  Reconstruction (Pixel Size 1.9 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-06-21-11/3dimage_4990/09jun17a_A22c_016_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.fxfxay
title: Occurrence Download

description: A dataset containing 23363 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Terminalia catappa"
 ]
}

 The dataset includes 23363 records from 585 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037775-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/zfbct-hrx13
title: AimB depletion control w/ xylose

description: Raw data files of AimB depletion control w/ xylose
description: <strong>Tilt Series Date:</strong> 2009-09-21</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -16.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach, IMOD</p>
<strong>Collaborators and Roles:</strong> The AimB_depletion strain was constructed by John Werner, data collected by ZL</p>
<strong>Purification / Growth Conditions / Treatment:</strong> AimB depletion is achieved by serial exchanging media from that including 0.02% xylose to that including 0.3% glucose.</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/1 or R2/2, 10nm gold, 100% humidity</p>
  zla2009-09-21-21_slicer10177.jpg: Caulobacter crescentus .  vesicle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-21/rawdata/</p>09sep21a_AimBxyl_039.mrc,  Tilt Series (Pixel Size 1.192 nm), 536.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-21/rawdata/09sep21a_AimBxyl_039.mrc"
        > <i class="download icon"></i> Download </a></p>

        09sep21a_AimBxyl_039_full.rec,  Reconstruction (Pixel Size 2.384 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-21/3dimage_10356/09sep21a_AimBxyl_039_full.rec"
        > <i class="download icon"></i> Download </a></p>

        09sep21a_AimBxyl_039a.tif,  file associated to 3D Image #10356, 908.8 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-21/file_2831/09sep21a_AimBxyl_039a.tif"
        > <i class="download icon"></i> Download </a></p>

        09sep21a_AimBxyl_039.tif,  file associated to 3D Image #10356, 1.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-21/file_2832/09sep21a_AimBxyl_039.tif"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.ekde7h
title: Occurrence Download

description: A dataset containing 758 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Teucrium spinosum"
 ]
}

 The dataset includes 758 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037780-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/7jh1g-7y719
title: AimB depletion control w/ xylose

description: Raw data files of AimB depletion control w/ xylose
description: <strong>Tilt Series Date:</strong> 2009-09-21</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -16.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach, IMOD</p>
<strong>Collaborators and Roles:</strong> The AimB_depletion strain was constructed by John Werner, data collected by ZL</p>
<strong>Purification / Growth Conditions / Treatment:</strong> AimB depletion is achieved by serial exchanging media from that including 0.02% xylose to that including 0.3% glucose.</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/1 or R2/2, 10nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-20/rawdata/</p>09sep21a_AimBxyl_038.mrc,  Tilt Series (Pixel Size 1.192 nm), 536.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-20/rawdata/09sep21a_AimBxyl_038.mrc"
        > <i class="download icon"></i> Download </a></p>

        09sep21a_AimBxyl_038_full.rec,  Reconstruction (Pixel Size 2.384 nm), 471.9 MB  
        
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        > <i class="download icon"></i> Download </a></p>

        09sep21a_AimBxyl_038a.tif,  file associated to 3D Image #10354, 1.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-20/file_2829/09sep21a_AimBxyl_038a.tif"
        > <i class="download icon"></i> Download </a></p>

        09sep21a_AimBxyl_038.tif,  file associated to 3D Image #10354, 611.5 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-20/file_2830/09sep21a_AimBxyl_038.tif"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/1wbdk-1g496
title: HUVECs infected w/ pNLGFP

description: HUVECs cells infected with pNLGFP and cultured additional 24 h in presence of protease inhibitor. Sample# C71
description: <strong>Tilt Series Date:</strong> 2011-06-04</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> pNLGFP proviral construct from Irvin Chen UCLA.  Virus prepared at Caltech by Cora Woodward. Cells infected, frozen and imaged at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> HUVECs grown on grids and infected pNLGFP-VSVG and then cultures additional 24 h allowed virus expression in presence of protease inhibitor </p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-06-04-3/3dimage_68366/</p>11jun04_PI_3_full.rec,  Reconstruction (Pixel Size 2.0 nm), 557.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-06-04-3/3dimage_68366/11jun04_PI_3_full.rec"
        > <i class="download icon"></i> Download </a></p>

        11jun04_PI_3.st,  Tilt Series (Pixel Size 0.5 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-06-04-3/rawdata/11jun04_PI_3.st"
        > <i class="download icon"></i> Download </a></p>

        11jun04_PI_3_2bparticles.tiff,  file associated to 3D Image #68366, 644.6 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-06-04-3/file_15884/11jun04_PI_3_2bparticles.tiff"
        > <i class="download icon"></i> Download </a></p>

        11jun04_PI_3_2particles.tiff,  file associated to 3D Image #68366, 992.6 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-06-04-3/file_15885/11jun04_PI_3_2particles.tiff"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/g5bnd-wp372
title: AimB depletion control w/ xylose

description: Raw data files of AimB depletion control w/ xylose
description: <strong>Tilt Series Date:</strong> 2009-09-21</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -16.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach, IMOD</p>
<strong>Collaborators and Roles:</strong> The AimB_depletion strain was constructed by John Werner, data collected by ZL</p>
<strong>Purification / Growth Conditions / Treatment:</strong> AimB depletion is achieved by serial exchanging media from that including 0.02% xylose to that including 0.3% glucose.</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/1 or R2/2, 10nm gold, 100% humidity</p>
  zla2009-09-21-16_slicer10163.jpg: Caulobacter crescentus .  REZ ribosome exclusion zone
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-16/rawdata/</p>09sep21a_AimBxyl_034.mrc,  Tilt Series (Pixel Size 1.192 nm), 536.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-16/rawdata/09sep21a_AimBxyl_034.mrc"
        > <i class="download icon"></i> Download </a></p>

        09sep21a_AimBxyl_034_full.rec,  Reconstruction (Pixel Size 2.384 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-16/3dimage_10346/09sep21a_AimBxyl_034_full.rec"
        > <i class="download icon"></i> Download </a></p>

        09sep21a_AimBxyl_034a.tif,  file associated to 3D Image #10346, 1.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-16/file_2826/09sep21a_AimBxyl_034a.tif"
        > <i class="download icon"></i> Download </a></p>

        09sep21a_AimBxyl_034.tif,  file associated to 3D Image #10346, 770.9 kB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-16/file_2827/09sep21a_AimBxyl_034.tif"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bmd0d-a6t91
title: Myxococcus xanthus PilO-sfGFP

description: Strain SA4088Grid box YWC101
description: <strong>Tilt Series Date:</strong> 2014-05-13</p>
<strong>Data Taken By:</strong> Yi-Wei Chang</p>
<strong>Species / Specimen:</strong> Myxococcus xanthus</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-65.0°, 65.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -8.0 μm,  magnification: 27500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Strain form Lotte Sogaard-Andersen</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells grown 48 hr in shaking CTT medium at 30 degrees without antibiotics. OD600=0.8</p>
<strong>Sample Preparation:</strong> Vitrobot settings: 100% humidity, 3µl sample, 10 mg/ml BSA treated gold. -3.5 offset, 4 sec blot time, no drain. Ethane/propane mix. Grid: Quantifoil Cu 2/2 200.</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2014-05-13-2/3dimage_42473/</p>20140513_YWC101_10002_full.rec,  Reconstruction (Pixel Size 1.56 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2014-05-13-2/3dimage_42473/20140513_YWC101_10002_full.rec"
        > <i class="download icon"></i> Download </a></p>

        20140513_YWC101_10002_full.rec,  Reconstruction (Pixel Size 1.56 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2014-05-13-2/3dimage_42438/20140513_YWC101_10002_full.rec"
        > <i class="download icon"></i> Download </a></p>

        20140513_YWC101_10002_full.rec,  Reconstruction (Pixel Size 1.56 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2014-05-13-2/3dimage_42434/20140513_YWC101_10002_full.rec"
        > <i class="download icon"></i> Download </a></p>

        20140513_YWC101_10002.mrc,  Tilt Series (Pixel Size 0.39 nm), 3.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/ycw2014-05-13-2/rawdata/20140513_YWC101_10002.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/038kn-bed95
title: Azospirillum WT

description: Azospirillum brasilense strain SP7 (WT)
description: <strong>Tilt Series Date:</strong> 2014-05-07</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Azospirillum brasilense</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -12.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Gladys Alexandre</p>
  aba2014-05-07-3_slicer3884.jpg: Azospirillum hook aba2014-05-07-3_slicer3885.jpg: Azospirillum hook aba2014-05-07-3_slicer3886.jpg: Azospirillum hook aba2014-05-07-3_slicer3887.jpg: Azospirillum chemoreceptor array top view aba2014-05-07-3_slicer3888.jpg: Azospirillum chemoreceptor array side view aba2014-05-07-3_slicer3978.jpg: 28 nm chemoreceptor array and striped hook
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-05-07-3/rawdata/</p>AzoWT0003.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-05-07-3/rawdata/AzoWT0003.mrc"
        > <i class="download icon"></i> Download </a></p>

        AzoWT0003.rec,  Reconstruction (Pixel Size 0.0 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-05-07-3/3dimage_46559/AzoWT0003.rec"
        > <i class="download icon"></i> Download </a></p>

        AzoWT0003SITRT.rec,  Reconstruction (Pixel Size 0.0 nm), 7.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-05-07-3/3dimage_46560/AzoWT0003SITRT.rec"
        > <i class="download icon"></i> Download </a></p>

        AzoWT0003SITRTrot.rec,  Reconstruction (Pixel Size 0.0 nm), 7.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-05-07-3/3dimage_46562/AzoWT0003SITRTrot.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.68352a
title: Occurrence Download

description: A dataset containing 481 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Arctium minus",
 "Country is New Zealand",
 "HasCoordinate is true"
 ]
}

 The dataset includes 481 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0037781-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/q3b44-5rg33
title: Vibrio deltaCheA2

description: V. cholerae strain deleted for CheA2
description: <strong>Tilt Series Date:</strong> 2014-04-10</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Vibrio cholerae</p>
<strong>Strain:</strong> O1 biovar El Tor</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> reupload_downloaded</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Ikuro Kawagishi</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grew in LB 24 hours at 30C; diluted 150 µL into 2 mL Ca-HEPES buffer and grew 16 hours at 30C</p>
  aba2014-04-10-3_slicer3814.jpg: short and long chemoreceptor array in V. choleae deltaCheA2 aba2014-04-10-3_slicer3815.jpg: flagellar motor
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-10-3/rawdata/</p>VibrioDeltaA20001.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-10-3/rawdata/VibrioDeltaA20001.mrc"
        > <i class="download icon"></i> Download </a></p>

        VibrioDeltaA20001.rec,  Reconstruction (Pixel Size 0.0 nm), 1.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-10-3/3dimage_46689/VibrioDeltaA20001.rec"
        > <i class="download icon"></i> Download </a></p>

        VibrioDeltaA20001SIRT.rec,  Reconstruction (Pixel Size 0.0 nm), 7.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-10-3/3dimage_46690/VibrioDeltaA20001SIRT.rec"
        > <i class="download icon"></i> Download </a></p>

        VibrioDeltaA20001SIRTrot.rec,  Reconstruction (Pixel Size 0.0 nm), 7.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-04-10-3/3dimage_46691/VibrioDeltaA20001SIRTrot.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/qqvnb-0q242
title: AimB depletion control w/ xylose

description: Raw data files of AimB depletion control w/ xylose
description: <strong>Tilt Series Date:</strong> 2009-09-21</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -16.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach, IMOD</p>
<strong>Collaborators and Roles:</strong> The AimB_depletion strain was constructed by John Werner, data collected by ZL</p>
<strong>Purification / Growth Conditions / Treatment:</strong> AimB depletion is achieved by serial exchanging media from that including 0.02% xylose to that including 0.3% glucose.</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/1 or R2/2, 10nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-09-21-54/rawdata/</p>09sep21a_AimBxyl_072.mrc,  Tilt Series (Pixel Size 1.192 nm), 536.9 MB  
        
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        09sep21a_AimBxyl_072_part.rec,  Reconstruction (Pixel Size 2.384 nm), 471.9 MB  
        
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        09sep21a_AimBxyl_072a.tif,  file associated to 3D Image #10418, 967.5 kB  
        
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        09sep21a_AimBxyl_072.tif,  file associated to 3D Image #10418, 760.7 kB  
        
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