cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/j4kst5nwk4
title: Effects of mechanical stress on the activation mechanism of the angiotensin II type 1 receptor (AT1)

description: Data set for the article "Mechanical stress and anionic lipids synergistically stabilize an atypical structure of the angiotensin II type 1 receptor (AT1)" by Rym Ben Boubaker, Daniel Henrion and Marie Chabbert
The data set includes 
- DATA: numerical values to generate graphs (DATA_FOR_FIGURES.xlsx) and the TM3-TM6 and TM3_TM7 distances for all the replicas to generate heatmaps and figures (DISTANCES_TM3_TM6_AT1_ALL.xlsx and DISTANCES_TM3_TM7_AT1_ALL.xlsx). 
- Classical MD trajectories: charmm-gui constructs and trajectories with 55 frames from 0 to 220 ns
- Steered MD trajectories: For each replica, charmm-gui constructs, initial snapshots (.coor, .vel, .xsc and .pdb files) and a merged pdb file with 12 frames equidistant on the duration of the simulation (90ns), containing the receptor, water and ions molecules, and lipids within a distance of 8 Å, for straightforward visualization with Pymol 
- Scripts namd for classical and steered MD simulations and toppar files for Charmm36 forcefield
- Scripts tcl for VMD analysis 
- Scripts for cross-section measurements (.tcl, .sh and .inp files)
- Script .pl for quaternion calculation 
- Scripts for pressure profile measurements (include .tcl, .sh, .inp scripts and test data)
- Scripts R for Bio3D analysis, heatmaps, boxplots, and statistical analysis
DOI: 10.17632/j6bxmcwc8s
title: Implicit bias

description: This study explores the integration of implicit bias education into an undergraduate criminology program. Implicit bias, the unconscious attitudes that influence decisions, is particularly significant in criminal justice, where fairness is critical. The study involved embedding educational objectives related to implicit bias into a second-year module and evaluating students' perceptions before and after the intervention. Results indicated a significant increase in students' confidence in understanding, recognizing, and mitigating implicit bias. The findings suggest that structured educational interventions can enhance self-awareness and critical thinking about bias, important for future criminal justice professionals.
DOI: 10.17632/jv2w3tz7w5
title: Women Chicken farmers

description: This paper draws from a longitudinal action research project for gender inclusive vaccine value chains, with a focus on women’s empowerment. The action research involves engaging chicken farmers  through farmer cooperatives to enable access to inputs and services including vaccine technologies for New Castle Disease (NCD) vaccine for sustainable production of poultry .The study results are indicative of the important  and enabling role played by farmer groups and cooperatives  in promoting  chicken farming activities .A mixed methods design was employed to collect data from 1274 households across 6 pre-selected study areas (wards) within Makueni County
DOI: 10.17632/m4n6x6ssts
title: LINF_080009000

description: GOLGIN-like protein; Leishmania infantum (strain JPCM5)
DOI: 10.17632/mpdtpg6s4d
title: Home-based Rehabilitation in Covid-19 survivors

description: Home-based rehabilitation in Covid-19 survivors compared to traditional walking advice
DOI: 10.17632/pdhtrwcv4b
title: LINF_140007900

description: protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.17632/r5wscc2dz5
title: Mitochondriyal DNA polymorphism

description: SNPs evaluated in the study; NADH dehydrogenase subunit 5-13704 (C / T), Cytochrome b-15315 (C / T), 12S rRNA -740 (G / A), 12S rRNA -680 (T / C), Cytochrome C Oxidase I-7319 (T / C), Cytochrome C Oxidase I-7444 (G / A), Cytochrome C Oxidase II region 8252 (C/G), Cytochrome C Oxidase II- 7660 (G / A), Cytochrome C Oxidase II- 7975 (A / G), tRNA lysine- 8310 (T / C), Cytochrome C Oxidase II- 8014 (A / G), Cytochrome C Oxidase II- 8113 (C / A) and Cytochrome C Oxidase II- 8152 (G / A) were identified as.
DOI: 10.17632/smnxmb9b4m
title: Revision_MCD_files_1

description: MCD files from image mass cytometry data in MEMORI cohort
DOI: 10.17632/t3gz3kyby5
title: Case-specific policy mix overviews

description: This data shows policy instruments implemented by (trans)national government and public institutions across seven European cases (European Union, Germany, Hungary, Netherlands, Spain, Sweden, United Kingdom) aimed at the mainstreaming of urban nature-based solutions. For each policy instrument, a short description is provided along with information on instrument type (regulatory, financial, soft), subtype and year of introduction. In addition, instruments are linked to one or more of the seven urban infrastructure regime structures (1 = yes). A justification is provided in column G. For each case, the sum of policy instruments targeting each of the regime structures is indicated.
DOI: 10.17632/3vj4n5zczk
title: UMA ABORDAGEM PARA O AERODESIGN: METODOLOGIA E APLICAÇÃO DO REFORÇO DE AERONAVES COM COMPONENTES EM MADEIRA BALSA UTILIZANDO MATERIAIS COMPÓSITOS

description: Anais do II Simpósio Gaúcho de Engenharia Aeroespacial e Mecânica, UFSM
Santa Maria, RS, 24 a 26 de outubro de 2023
DOI: 10.17632/b7th8yzc5y
title: Weather files for Guangdong Province

description: This is a dataset for weather files of Guangzhou city and Yangjiang city.
DOI: 10.17632/c92tvndtz9
title: Environmental Instability Triggers: Hazard clusters analysis through geoacoustic data in a large coastal lagoon in southern Brazil

description: The research data presented here are seismic profiles cover anextension of approximately 1,000 km from the Patos Lagoon, divided into three sectors (Northen, Central, Southern). Seismic records were positioned through DGPS (Differential GlobalPositioning System) and acquired with a Geopulse Subbottom Profiler, from GeoAcousticsTM, an analog and digital system that can operate within a frequency range from 2 to 12 kHz. This seismic acquisition system consisted of a Geopulse receiver (5210A), a Geopulse transmitter (5430A), and a transducer (132B, with four elements). After few tests in place to assess the geoacoustic seismic response, a 3.5 kHz frequency acquisition was selected. The seismic data acquiring, and processing were performed using software SonarWiz (Chesapeake Technology), and the data was stored in SEG-Y digital format.
DOI: 10.17632/k2cczyyhch
title: LINF_120005600

description: ribonuclease mar1; Leishmania infantum
DOI: 10.17632/m3rjyf3b5d
title: Datos motilidad Semen

description: Datos de motilidad del estudio de semen de tenca https://doi.org/10.1111/andr.12071
DOI: 10.17632/mybnv963mk
title: Supplemental Fig 2. Dermatological manifestations in patients with vs. without VEXAS syndrome

description: 2A. Patients with VEXAS syndrome
(a) Tender, red papules on the arm (patient #1). (b) Livedo racemosa on the leg, (c) inflammatory, edematous papules on the neck, and (d) acute lower limb ischemia (patient #2). (e) Firm, erythematous, purpuric, infiltrated plaques on the legs (patient #3). (f) Violaceous, flat plaques on the arm (patient #4). (g) Tender, red papules on the arm, (h) auricular chondritis, and (i) ulcerations of the palate (patient #5). (j) Violaceous papules on the legs, and (k) purpuric livedo on the arm (patient #6). (l) Inflammatory erythematous plaques and pustules (patient #7).

2B. Patients without VEXAS syndrome 
(a) Target-shaped erythematous plaques on the leg (patient #8). (b) Inflammatory edematous papules on the upper back (patient #9). (c) Purpuric plaques and pustules on the leg (patient #10). (d) Violaceous flat plaques on the arm (patient #11). (e) Inflammatory edematous papules and ulceronecrotic lesions on the hand (patient #12). (f) Pustules and ulceronecrotic lesions on the hand (patient #13). (g, h) Inflammatory pustules on the hand (patient #17). (i) Livedo racemosa on the leg, and (j) infiltrated erythematous plaque with large ulceronecrotic lesions on the thigh (patient #18). (k) Panniculitis on the thigh (patient #20). (l) Target-shaped infiltrated erythematous plaque on the knee, and (m) infected auricular chondritis (patient #21). (n, o) Tender, red papules on the trunk and hands (patient #22).

VEXAS: vacuoles, E1 enzyme, X-linked, autoinflammatory, somatic syndrome.
DOI: 10.17632/pfd5nnc6jf
title: Data for: Li isotope fractionation during silicate weathering in the upper Yangtze River reveals topographic control on the Li cycle

description: Raw data for all figures in the manuscript to be published by Geochimica et Cosmochimica Acta as "Li isotope fractionation during silicate weathering in small catchments reveals topographic control on the Li cycle".
DOI: 10.17632/rvvwx786vp
title: Amadori et al. (Measurement Dataset - Ptychodus maghrebianus and P. mortoni)

description: Matrix of linear measures taken on various isolated, articulated and associated teeth (see also Tab. 1) belonging to Ptychodus maghrebianus sp. nov. (MAG) and P. mortoni (MOR) or still indeterminate (IND). Linear measurements are in millimeters (see Fig. 3 for acronyms and more details). Estimated values are highlighted in yellow. Asterisks indicate teeth assembled artificially. H, holotype; C, FHSM VP-17415C; P, tooth placement within the dental plate; Lt, left hemiarch; Rt, right hemiarch; m, symphyseal teeth; ln, lateral teeth.
DOI: 10.17632/s974c3zt33
title: Resilience, Dedication, and Training: A Study on Nurses Response to the COVID-19 Pandemic in Albania

description: The COVID-19 pandemic supplied remarkable challenges for healthcare workers globally, with nurses in Albania playing an important role in response efforts. expertise their studies, challenges, and perceptions throughout this era is essential to tell future preparedness techniques and support the healthcare body of workers.
DOI: 10.17632/xv2x29cnhx
title: Comparing the Utility of Shore Platform Elevations As Sea Level Proxies in Temperate, Microtidal Environments

description: Measurements of shore platforms identified and mapped along the subaerial, contemporary coast of Victoria, Australia, as well as paleo shore platforms discovered and mapped roughly 50 m below modern sea level. These data were used to measure shore platform elevation as a proxy for sea level at the time of platform formation.
DOI: 10.17632/y7tmct5v9c
title: Processed data "Demand Characterisation"

description: Data for smart meters
DOI: 10.17632/y9dwv4wvgr
title: LINF_300040700

description: LORIEN protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/26s932pcb7
title: Critical and Qualitative Analysis of the Mollie Tibbetts Murder on Twitter

description: This supplemental dataset includes tables that further explicate the contours of the Tibbetts tragedy as it unfolded on Twitter (aka X). It is meant to append to the article "From Local Tragedy to National News: Twitter, Anti-Immigrant Discourse, and the Politicization of Public Mourning Online" which provides more useful critical analysis of how these data hold meaning.
DOI: 10.17632/4dzbymfpmg
title: Survey - Innovation Community

description: As part of the 'For Future Furniture' 2023 ideas competition, over 100 designers and inventors have already submitted their own design ideas (closing date 02/2023). All participants are encouraged to take part in a voluntary survey.
The survey is divided into four overarching areas.

I. Participant profile (classification of participants)
II. Aspect from the area of Product Innovation
III. Aspect from the area of Product Development
IV. Aspect from the area of Production Process
DOI: 10.17632/52n3zvn8f6
title: LINF_200021800

description: mitochondrial RNA ligase 2 | KREL2
Leishmania infantum (strain JPCM5)
DOI: 10.17632/67gyxw9j7n
title: Single cell antibody sequences from ApoE mouse aortic germinal center B cells

description: Immunoglobulin Heavy and Light chain sequences from germinal center B cells derived from the ApoE-/- mouse aorta. Mice were place on a high-fat diet at 12 weeks of age and germinal center B cells were collect at 28 weeks of age. Samples were single cell sorted, reverse transcribed using a template switch oligo, and PCR amplified from the IgH or IgK constant region to the variable region leader sequence. Files are provided as FASTA files.
DOI: 10.17632/67shfscvvy
title: LDHU3_10.1490

description: Poly(A) polymerase; Leishmania donovani (HU3 strain)
DOI: 10.17632/72ypdspmfm
title: Use of advanced systemic therapy in patients with moderate-to-severe atopic dermatitis: a cohort study in the TARGET-DERM AD Registry

description: The full result set for the aforementioned analysis.
DOI: 10.17632/9ztmw296jh
title: Informed conservation management of rare tree species needs knowledge of species composition, their genetic characteristics and ecological niche

description: Here we assess Tilia species in the Bavarian Forest National Park (BFNP), a large mixed coniferous and deciduous forest in South-Eastern Germany. Tilia occurs here at low density, as in many other mixed forests in Central and Northern Europe. Therefore, results are not only relevant to BFNP but also to other areas. Exhaustive sampling resulted in the collection of 113 mature trees that were genotyped using 20 microsatellite markers, derived from both T. cordata and T. platyphyllos. For the first time, size and aspect of trees, and their community association were contrasted between the species. The data presented here contain the genotypes of the trees as well as size measurements and ecological data of their location. Genotyping confirmed that T. platyphyllos, T. cordata and their hybrid (T. x europaea) were present in the BFNP and both species deserve conservation. T. platyphyllos has a higher genetic diversity for both sets of markers than T. cordata, confirming earlier work. Both species showed genetic diversity comparable to other populations in Central Europe, which is likely to be sufficient for the maintenance of the species in the short term. However, increasing the number of trees, ensuring local sources are used, and gene flow from surrounding forests over the next decennia may be crucial for long-term survival. Further, within the T. platyphyllos group there was a set of 11 trees that were distinct from the others: they had a lower genetic diversity and were shorter. We hypothesise that these were planted and should not be used for propagation and augmentation. Most saplings analysed appeared to derive from asexual propagation (36 out of 41), although a few (five out of 41) were novel genotypes. This means that, currently, there is some, but rather limited, regeneration. T. cordata was found at a lower altitude and less steep terrain than T. platyphyllos and the hybrid. The hybrid was taller than the two species, while the diameter at breast height was smallest in T. cordata. T. cordata shows a preference for mixed and coniferous forests, while T. platyphyllos occurs mostly in deciduous forests. Our results indicate that biodiversity at the species and genetic level as well as species’ ecology have to be considered in order to guide informed conservation management. These results form the basis to recommend conservation management improving the long-term viability of Tilia in the BFNP and other mixed forests.
DOI: 10.17632/bpgyfd5zsk
title: LDHU3_08.0100

description: ATP-dependent DEAD/H RNA helicase; Leishmania donovani (HU3 strain)
DOI: 10.17632/bvt5d6t2xz
title: Utility of Preoperative Ultrasonography and Fine-Needle Aspiration Cytology in Differentiation Between Benign and Malignant Cervical Lymphadenopathy: A Retrospective Cohort Study

description: The preoperative differentiation of benign form malignant cervical lymphadenopathy (CLA) is crucial in determining the need for surgical intervention. This study aims to assess the diagnostic performance of ultrasonography (US), fine-needle aspiration cytology (FNAC), and their combination with the postoperative histopathological diagnoses of CLA.
DOI: 10.17632/c8x2rsk4pk
title: LDHU3_02.0030

description: histone H4; Leishmania donovani
DOI: 10.17632/d5kx7xnywg
title: Guided osteotomy technique in USO

description: Raw data of guided osteotomy technique in USO
DOI: 10.17632/d8ypgnr43y
title: Data for: Early Cretaceous Wulong intermediate-mafic dike swarms in the Liaodong Peninsula: Implications for the rapid destruction of the North China Craton

description: Data for: Early Cretaceous Wulong intermediate-mafic dike swarms in the Liaodong Peninsula: Implications for the rapid destruction of the North China Craton Keywords: Mafic dikes; Asthenospheric mantle; Delamination; Craton destruction; North China Craton
DOI: 10.17632/fm7x2h24m3
title: LINF_200022000

description: amidohydrolase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/j4yr6hg7tm
title: CSR & Brand Awareness to ITA

description: Absract
DOI: 10.17632/j5wkx5wwmd
title: The Contribution of the Gaza Envelope Region to Israel's Food Security

description: Supplementary data tables for the paper "The Contribution of the Gaza Envelope Region to Israel's Food Security"

Supplementary Table 1: Calculated yield data of crops grown within 5 km of the Gaza border.
Supplementary Table 2: Calculated yield data of crops grown within 10 km of the Gaza border.
Supplementary Table 3: Calculated yield data of crops grown within 20 km of the Gaza border.
Supplementary Table 4: Nutrient content of edible crops grown within 5 km of the Gaza border.
Supplementary Table 5: Nutrient content of edible crops grown within 10 km of the Gaza border.
Supplementary Table 6: Nutrient content of edible crops grown within 20 km of the Gaza border.
DOI: 10.17632/jwgkrdyfnd
title: Fixed drug eruption

description: A & B. FDE in 2 distinct patient
C. Positive in situ repeated application test after 3-4 days of doxycycline application, on the initial reaction site
D. Reactivation of a previous FDE lesion following oral provocation test with doxycycline 50 mg.
DOI: 10.17632/p2bnkr5rfc
title: datatvet

description: students' performance
DOI: 10.17632/pgnnztvk67
title: Ca/Al ratio in sediments from the Piedra Buena contourite terrace

description: XRF analysis on bulk sediment samples from cores AI-3327, AI-3329 and AI-3443 was performed using Olympus Vanta C XRF-spectrometer with Ag anode and source power of 4 W. The analysis was carried out with 1 cm down-core interval using the following tube settings: 10 kV (131 mA, 40 kV (87.66 mA), real-time of 30 seconds for each beam. Every sample of bulk sediment (~ 3 cm3) was packed into the Chemplex double open-ended XRF sample cup covered with 6 µm thick mylar film. Element composition of sediments in archive halves of cores AI-3441 and AI-3442 was analyzed using a Geotek MSCL-XYZ core workstation equipped with the ultra-sensitive Geotek XRF spectrometer (Rh anode, 15W X-ray tube, helium-flushed measurement cell). The analysis was performed with 0.5 cm down-core resolution using the following settings: measurement area of 15 × 1 mm, 10 kV (70μA), 40 kV (95μA) with 125 μm thick Ag filter, 1 second live time for each beam. The XRF spectral data were processed using bAxil software (peak identification, element intensity calculation). The split cores were covered with 416 Prolene 4 μm thin film.
The authors thanks Petr Perfilov for his help with sample preparation and measurements
DOI: 10.17632/pnt66hb8dg
title: Diverse processing of pharmacological and natural rewards by the central amygdala

description: Files used for exemplary figures in an article "Diverse processing of pharmacological and natural rewards by the central amygdala"
DOI: 10.17632/t68872t2fn
title: Data for: Soil carbon density can increase when Australian savanna is converted to pasture, but may not change under intense cropping systems

description: Two datasets from the Douglas-Daly and the South Katherine agricultural regions of the Northern Territory, Australia. Both datasets provide savanna woodland soil profile data, as well as a young and old agricultural land-use systems that have replaced savanna woodland ecosystems. In Douglas-Daly, there are young and old pasture systems; in South Katherine there are young and old fields of Melon cropping
DOI: 10.17632/tn929cjbkt
title: Exceptional evolutionary lability of flower-like inflorescences (pseudanthia) in Apiaceae subfamily Apioideae

description: A NEXUS file containing:
1) Aligned matrices of five molecular markers: nrDNA ITS (ITS), nr DNA ETS (ETS), rpoC1 (rpoC1), rps16 (rps16) and rpl16 (rpl16)
2) Aligned matrices of five molecular markers trimmed with TrimAl v. 1.259: nrDNA ITS (ITStrimmed), nr DNA ETS (ETStrimmed), rpoC1 (rpoC1trimmed), rps16 (rps16trimmed) and rpl16 (rpl16trimmed)
3) Concatenated trimmed matrices (CONCATENATED)
4) Maximum-likelihood tree reconstructed based on concatenated matrix with maximum-likelihood approach, as implemented in RAxML
DOI: 10.17632/v2d59hzyj6
title: Chromosome size-dependent polar ejection force impairs mammalian mitotic error correction

description: Summary of the work: Accurate chromosome segregation requires sister kinetochores to biorient, attaching to opposite spindle poles. To this end, the mammalian kinetochore destabilizes incorrect attachments and stabilizes correct ones, but how it discriminates between these is not yet clear. Here, we test the model that kinetochore tension is the stabilizing cue and ask how chromosome size impacts that model. We live image PtK2 cells, with just 14 chromosomes, widely ranging in size, and find that long chromosomes align at the metaphase plate later than short chromosomes. Enriching for errors and imaging error correction live, we show that long chromosomes exhibit a specific delay in correcting attachments. Using chromokinesin overexpression and laser ablation to perturb polar ejection forces, we find that chromosome size and force on arms determine alignment order. Thus, we propose a model where increased force on long chromosomes can falsely stabilize incorrect attachments, delaying their biorientation. As such, long chromosomes may require compensatory mechanisms for correcting errors to avoid chromosomal instability.

Data associated with the paper: "Chromosome size-dependent polar ejection force impairs mammalian mitotic error correction" Chong et al. Journal of Cell Biology.

Here, we include data used to generate the figures in this paper. Files are created and can be opened with GraphPad Prism. Individual kinetochore position data used to generate average distance to pole and average speed in monopolar spindles for control (Fig. 1H, Fig. 2E) and chromokinesin overexpression (Fig. S3) can be found in the excel file titled "distance to pole source data".
DOI: 10.17632/v6mn4d6rwx
title: GNE solution experiments 

description: This excel file contains results from numrical experiments. The Generalized Nash Equilibrium optimizaition models for both players were solved using the algorithm given in the paper.
DOI: 10.17632/w84r3s27nj
title: LINF_360071600

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/w9nkcpp8j7
title: LINF_240020000

description: NPK1-related protein kinase
Leishmania infantum (strain JPCM5)
DOI: 10.17632/yxjt3fpdgb
title: Dissecting the changes in bacterial metaproteomics during primary succession in a retreating glacier form the Tibetan plateau

description: The data shows the transition of plant density soil nutrient (C, N, P, and S) availability, soil enzyme activity, respiration, organic matter decomposition, and different bacterial-nutrient cycling proteins along a forefield chronosequence. We observed that (1) soil nutrient availability increases with site age; (2) as the forefield ages, the proteins dominating the succession stages transition across functional groups; 3) increasing plant density is a key driver to the evolution of soil processes (soil edaphic factors), not the other way round; 4) along the succession stages, nutrient availability is primarily affected by bacterial respiration and organic matter decomposition; and 5) SOM decomposition and soil bacteria respiration rates directly increase with site age. We observed that plant colonization was the main driver of soil pH, enhancing KTBI and SBR nutrient availability, enzyme activity, and KTBI. Nutrient availability was directly influenced by nutrient-metabolizing proteins, plant density, KTBI, and SBR.