cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ezjuty
title: Occurrence Download

description: A dataset containing 7529 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "TaxonKey is Apodemus agrarius (Pallas, 1771)"
 ]
}

 The dataset includes 7529 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150201-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.df6y8u
title: Occurrence Download

description: A dataset containing 947 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Desmognathus aeneus Brown & Bishop, 1947",
 "HasCoordinate is true"
 ]
}

 The dataset includes 947 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0414299-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ptx3x6
title: Occurrence Download

description: A dataset containing 303 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Crotalaria spectabilis Roth",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 303 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005765-170826194755519/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.dvcxbu
title: Occurrence Download

description: A dataset containing 56746 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-34.43860 21.13885,132.43860 21.13885,132.43860 87.86115,-34.43860 87.86115,-34.43860 21.13885))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Microtus agrestis (Linnaeus, 1761)"
 ]
}

 The dataset includes 56746 records from 379 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150200-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vbp1m4
title: Occurrence Download

description: A dataset containing 122 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 {
 "or" : [
 "Geometry POLYGON ((-74.1522216796875 4.971928253058911, -74.256591796875 4.806364708499998, -74.16046142578125 4.684560804504988, -73.98468017578125 4.673611091306695, -73.97369384765625 4.874784352885875, -73.992919921875 4.995185944760424, -74.091796875 5.00613045557265, -74.1522216796875 4.971928253058911))",
 "Geometry POLYGON ((-74.1522216796875 4.971928253058911, -74.256591796875 4.806364708499998, -74.16046142578125 4.684560804504988, -73.98468017578125 4.673611091306695, -73.97369384765625 4.874784352885875, -73.992919921875 4.995185944760424, -74.091796875 5.00613045557265, -74.1522216796875 4.971928253058911))"
 ]
 },
 "HasCoordinate is true",
 "TaxonKey is Atractus crassicaudatus (Duméril, Bibron & Duméril, 1854)"
 ]
}

 The dataset includes 122 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005765-171025204727650/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3g4gsd
title: Occurrence Download

description: A dataset containing 27541 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Euphorbia stricta L."
 ]
}

 The dataset includes 27541 records from 388 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0205049-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nu4yph
title: Occurrence Download

description: A dataset containing 11723 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Spodoptera frugiperda J.E.Smith, 1797"
 ]
}

 The dataset includes 11723 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0197362-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s447wn
title: Occurrence Download

description: A dataset containing 7529 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "TaxonKey is Apodemus agrarius (Pallas, 1771)"
 ]
}

 The dataset includes 7529 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0150207-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.lq8o6c
title: Occurrence Download

description: A dataset containing 231839 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lapsana communis L."
 ]
}

 The dataset includes 231839 records from 573 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0005765-171124123535762/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25442/hku.26933953
title: Supporting data for “HA15 and 4μ8C Combination as a Novel Therapeutic Strategy in Chondrosarcoma Patient-Derived Xenograft Models: Exploiting Grade-Dependent ER stress Vulnerabilities”

description: This dataset contains single-cell RNA sequencing, Western blot, immunohistochemistry, and in vitro assay data from a study examining ER stress profiles in low-grade (LCHS) and high-grade chondrosarcoma (HCHS). The data include gene and protein expression levels, cell viability, apoptosis, migration, and invasion assays, as well as tumor growth and survival outcomes from patient-derived xenograft (PDX) models. Key findings reveal that LCHS has higher baseline ER stress than HCHS, with HA15 inducing apoptosis in LCHS and promoting survival in HCHS. A combination of HA15 and the IRE1α inhibitor 4μ8C synergistically induces apoptosis in HCHS, offering a potential therapeutic strategy.
DOI: 10.25442/hku.26933953.v1
title: Supporting data for “HA15 and 4μ8C Combination as a Novel Therapeutic Strategy in Chondrosarcoma Patient-Derived Xenograft Models: Exploiting Grade-Dependent ER stress Vulnerabilities”

description: This dataset contains single-cell RNA sequencing, Western blot, immunohistochemistry, and in vitro assay data from a study examining ER stress profiles in low-grade (LCHS) and high-grade chondrosarcoma (HCHS). The data include gene and protein expression levels, cell viability, apoptosis, migration, and invasion assays, as well as tumor growth and survival outcomes from patient-derived xenograft (PDX) models. Key findings reveal that LCHS has higher baseline ER stress than HCHS, with HA15 inducing apoptosis in LCHS and promoting survival in HCHS. A combination of HA15 and the IRE1α inhibitor 4μ8C synergistically induces apoptosis in HCHS, offering a potential therapeutic strategy.
DOI: 10.25442/hku.26953117
title: Supporting data for "‘The ant in the room’: spatial and temporal assembly of ants from a forest to a planet"

description: Dataset used for PhD thesis "‘The ant in the room’: spatial and temporal assembly of ants from a forest to a planet". The dataset contains the following files: 1) "ant avtivities.csv": The spatial and temporal occurrence records of different ant species; 2) "site information.csv": The location and elevation information of different sampling sites; 3) "thermal traits.csv": The thermal traits data of different ant species.
DOI: 10.25442/hku.26953117.v1
title: Supporting data for "‘The ant in the room’: spatial and temporal assembly of ants from a forest to a planet"

description: Dataset used for PhD thesis "‘The ant in the room’: spatial and temporal assembly of ants from a forest to a planet". The dataset contains the following files: 1) "ant avtivities.csv": The spatial and temporal occurrence records of different ant species; 2) "site information.csv": The location and elevation information of different sampling sites; 3) "thermal traits.csv": The thermal traits data of different ant species.
DOI: 10.25442/hku.26946538
title: Supporting data for "Bioengineering of the human endometrial stem cell niche: A regulatory environment for endometrial regeneration"

description: Endometrium is the mucosal lining of the uterus where embryo implantation occurs. Human endometrial thickness of less than 7 mm significantly reduces the likelihood of a successful pregnancy. Endometrial mesenchymal stem cells (eMSC) located near blood vessels in the endometrium possess great translational therapeutic potential as a cell source for promoting the endometrium regeneration in patients with thin endometrium. Yet, a lack of comprehensive understanding of the regulatory mechanisms of eMSC hinders the development of effective strategies to optimize the <i>in vitro</i> expansion and maximize the <i>in vivo </i>therapeutic effects.The stem cell niche refers to the microenvironment controlling stem cell behavior. This thesis focuses on identifying key regulatory niche factors to optimize the expansion and therapeutic application of eMSC. Research included in this study explores the effects of niche factors such as endothelial cells, oxygen level, and extracellular matrix (ECM) on eMSC. Additionally, two biomaterials, EndoMatriGel and EndoMatriScaffold, were developed and characterized as platforms for delivering eMSC to enhance their function.The findings in this thesis significantly advanced the knowledge base for cell therapy for endometrium regeneration by providing insights for tailoring optimal culture substrates for eMSC. The development of novel biomaterials as delivery systems has great potential for enhancing the therapeutic effects of eMSC in endometrial regeneration.
DOI: 10.25442/hku.26946538.v1
title: Supporting data for "Bioengineering of the human endometrial stem cell niche: A regulatory environment for endometrial regeneration"

description: Endometrium is the mucosal lining of the uterus where embryo implantation occurs. Human endometrial thickness of less than 7 mm significantly reduces the likelihood of a successful pregnancy. Endometrial mesenchymal stem cells (eMSC) located near blood vessels in the endometrium possess great translational therapeutic potential as a cell source for promoting the endometrium regeneration in patients with thin endometrium. Yet, a lack of comprehensive understanding of the regulatory mechanisms of eMSC hinders the development of effective strategies to optimize the <i>in vitro</i> expansion and maximize the <i>in vivo </i>therapeutic effects.The stem cell niche refers to the microenvironment controlling stem cell behavior. This thesis focuses on identifying key regulatory niche factors to optimize the expansion and therapeutic application of eMSC. Research included in this study explores the effects of niche factors such as endothelial cells, oxygen level, and extracellular matrix (ECM) on eMSC. Additionally, two biomaterials, EndoMatriGel and EndoMatriScaffold, were developed and characterized as platforms for delivering eMSC to enhance their function.The findings in this thesis significantly advanced the knowledge base for cell therapy for endometrium regeneration by providing insights for tailoring optimal culture substrates for eMSC. The development of novel biomaterials as delivery systems has great potential for enhancing the therapeutic effects of eMSC in endometrial regeneration.
DOI: 10.6084/m9.figshare.27071723
title: Additional file 2 of Extracellular vesicle miRNome during subclinical mastitis in dairy cows

description: Additional file 2: DE miRNA list. In Additional file 1, the list of DE miRNAs with related FC and p value data is reported, with an SCC cut-off of 200,000 cells/mL used for differential analysis.
DOI: 10.15468/dl.zner5h
title: Occurrence Download

description: A dataset containing 9 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Excidobates mysteriosus (Myers, 1982)"
 ]
}

 The dataset includes 9 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024081-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25223865
title: Additional file 2 of A human stomach cell type transcriptome atlas

description: Additional file 2:Table S1. Reference transcript selection and analysis criteria. (Tab 1): Correlation coefficient values were calculated between selected Ref.T. to represent constituent stomach cell types. (Tab 2): Correlation coefficient values were calculated between selected Ref.T. and all other sequenced transcripts in GTEx stomach mRNAseq data (Table A) and the mean differential vs. all Ref.T. panels (Table B). Genes classified as enriched in: (Tab 3) parietal cells, (Tab 4) chief cells, (Tab 5) gastric enteroendocrine cells, (Tab 6) gastric mucous cells, (Tab 7) mitotic cells, (Tab 8) endothelial cells, (Tab 9) fibroblasts, (Tab 10) macrophages, (Tab 11) neutrophils, (Tab 12) T-cells and (Tab 13) plasma cells were analysed to identify over-represented terms in the (Table A) gene ontology or (Table B). (Tab 14) Comparison of our cell type enrichment predictions with scRNAseq datasets. See key for column details. Related to all Figures.
DOI: 10.6084/m9.figshare.26680678
title: Additional file 5 of A human stomach cell type transcriptome atlas

description: Additional file 5: Table S2. Sex stratified subset analysis of cell-enriched genes in human stomach. (Tab 1): Correlation coefficient values were calculated between selected Ref.T. to represent constituent stomach cell types in females (Table A) or males (Table B). (Tab 2) Correlation coefficient values were calculated between selected Ref.T. and all other sequenced transcripts in stomach mRNAseq data (GTEx), subdivided into (Table A) female or (Table B) male only sample sets. See key for column details. Related to Fig. 7 and Fig. S4.
DOI: 10.25442/hku.26932078
title: <b><i>Supporting data for </i></b>"Real-world evaluation of a chatbot for promoting the reach and accessibility of a smoking cessation service"

description: Chatbots present as a promising yet understudied platform for supporting smoking cessation and recruiting smokers into cessation programs. "Dr. Wise", a WhatsApp-based chatbot, was developed by the Tung Wah Group of Hospitals Integrated Centre on Smoking Cessation (ICSC) in collaboration with the HKU Smoking Cessation Team to assist with regular recruitment. This project evaluated the feasibility of using "Dr. Wise" to promote the reach of ICSC services and explored the interaction between users and counselors via the live chat channel, which was embedded in "Dr. Wise".From May 2021 to June 2022, 3074 smokers were enrolled in the ICSC, of whom 123 (4.0%) utilized "Dr. Wise". Users of "Dr. Wise" were significantly younger and more likely to receive pharmacotherapy compared to non-users. Moreover, using "Dr. Wise" was positively associated with long-term abstinence. From May 2021 to November 2022, 122 valid dialogues were collected from the live chat. Topic modeling revealed that the live chat channel effectively supported users by providing relapse prevention support, connecting users with clinics, and addressing concerns related to ongoing pharmacotherapy. Sentiment analysis indicated a higher prevalence of positive sentiment expressions in users' and counselors' messages. Notably, negative sentiment used in both parties' messages was positively associated with user engagement. Overall, the findings suggested that "Dr. Wise" helped ICSC reach diverse populations and that the built-in live chat channel provided users with additional benefits.
DOI: 10.25442/hku.26932078.v1
title: <b><i>Supporting data for </i></b>"Real-world evaluation of a chatbot for promoting the reach and accessibility of a smoking cessation service"

description: Chatbots present as a promising yet understudied platform for supporting smoking cessation and recruiting smokers into cessation programs. "Dr. Wise", a WhatsApp-based chatbot, was developed by the Tung Wah Group of Hospitals Integrated Centre on Smoking Cessation (ICSC) in collaboration with the HKU Smoking Cessation Team to assist with regular recruitment. This project evaluated the feasibility of using "Dr. Wise" to promote the reach of ICSC services and explored the interaction between users and counselors via the live chat channel, which was embedded in "Dr. Wise".From May 2021 to June 2022, 3074 smokers were enrolled in the ICSC, of whom 123 (4.0%) utilized "Dr. Wise". Users of "Dr. Wise" were significantly younger and more likely to receive pharmacotherapy compared to non-users. Moreover, using "Dr. Wise" was positively associated with long-term abstinence. From May 2021 to November 2022, 122 valid dialogues were collected from the live chat. Topic modeling revealed that the live chat channel effectively supported users by providing relapse prevention support, connecting users with clinics, and addressing concerns related to ongoing pharmacotherapy. Sentiment analysis indicated a higher prevalence of positive sentiment expressions in users' and counselors' messages. Notably, negative sentiment used in both parties' messages was positively associated with user engagement. Overall, the findings suggested that "Dr. Wise" helped ICSC reach diverse populations and that the built-in live chat channel provided users with additional benefits.
DOI: 10.6084/m9.figshare.27071809
title: Additional file 1 of Low-dose of oligosaccharins boosts antiviral immunity through induction of multiple defense pathways in rice

description: Additional file 1: Table S1. The detailed data of RNA-seq in Fig. 2.
DOI: 10.25442/hku.26926765
title: Supporting Data for Martialling bodies: Sporting territoriality and body politics in Hong Kong

description: The dataset is a collection of interview transcripts on sporting practices in Hong Kong. It explores the politicisation of sports and body politics in Hong Kong. They include interviewees from two field sites: a fitness club and a Chinese martial arts centre. Each field site had 12 interviewees, with the exception of my personal friend, who served as an additional interviewee and was instrumental in inspiring me to undertake this project. The duration of these interviews varied from 30 minutes to three hours. These interviews were conducted in comfortable settings, such as local cafes and restaurants near the interviewees’ residences or workplaces. These conservations took place at times and spaces when the interviewees were not engaged in physical exercise, where they could fully concentrate on the interviews themselves. Out of all the interviews, only two were conducted via videoconferencing. One interviewee had migrated overseas, while the other interview took place online due to safety concerns during a typhoon. The interviewees were fully informed about the research and were aware of the audio recording. They also signed a consent form acknowledging the research protocol and the confidentiality of their personal information.
DOI: 10.25442/hku.26926765.v1
title: Supporting Data for Martialling bodies: Sporting territoriality and body politics in Hong Kong

description: The dataset is a collection of interview transcripts on sporting practices in Hong Kong. It explores the politicisation of sports and body politics in Hong Kong. They include interviewees from two field sites: a fitness club and a Chinese martial arts centre. Each field site had 12 interviewees, with the exception of my personal friend, who served as an additional interviewee and was instrumental in inspiring me to undertake this project. The duration of these interviews varied from 30 minutes to three hours. These interviews were conducted in comfortable settings, such as local cafes and restaurants near the interviewees’ residences or workplaces. These conservations took place at times and spaces when the interviewees were not engaged in physical exercise, where they could fully concentrate on the interviews themselves. Out of all the interviews, only two were conducted via videoconferencing. One interviewee had migrated overseas, while the other interview took place online due to safety concerns during a typhoon. The interviewees were fully informed about the research and were aware of the audio recording. They also signed a consent form acknowledging the research protocol and the confidentiality of their personal information.
DOI: 10.6084/m9.figshare.26680678.v1
title: Additional file 5 of A human stomach cell type transcriptome atlas

description: Additional file 5: Table S2. Sex stratified subset analysis of cell-enriched genes in human stomach. (Tab 1): Correlation coefficient values were calculated between selected Ref.T. to represent constituent stomach cell types in females (Table A) or males (Table B). (Tab 2) Correlation coefficient values were calculated between selected Ref.T. and all other sequenced transcripts in stomach mRNAseq data (GTEx), subdivided into (Table A) female or (Table B) male only sample sets. See key for column details. Related to Fig. 7 and Fig. S4.
DOI: 10.6084/m9.figshare.27071809.v1
title: Additional file 1 of Low-dose of oligosaccharins boosts antiviral immunity through induction of multiple defense pathways in rice

description: Additional file 1: Table S1. The detailed data of RNA-seq in Fig. 2.
DOI: 10.25442/hku.26901424
title: Supporting data for "<i>REVEALING THE UNDER-RECOGNISED </i><i>VOLCANIC HISTORY OF MARS – ERA OF </i><i>CATASTROPHIC ERUPTIONS</i>"

description: This thesis aims to explore an underrecognised global population of ancient volcanic constructs on Mars and evaluate the potential sources of the vast ash deposition in the mid latitude regions across the globe. This work also explores the potential of a larger unknown population of volcanic complexes that has involved explosive eruption in late/mid Noachian to early Hesperian time, which perhaps represents the documentation of the transition of eruption style in the Martian volcanic history.The dataset is a record of Martian impact crater database analysis for the searching of degraded caldera constructs.
DOI: 10.25442/hku.26901424.v1
title: Supporting data for "<i>REVEALING THE UNDER-RECOGNISED </i><i>VOLCANIC HISTORY OF MARS – ERA OF </i><i>CATASTROPHIC ERUPTIONS</i>"

description: This thesis aims to explore an underrecognised global population of ancient volcanic constructs on Mars and evaluate the potential sources of the vast ash deposition in the mid latitude regions across the globe. This work also explores the potential of a larger unknown population of volcanic complexes that has involved explosive eruption in late/mid Noachian to early Hesperian time, which perhaps represents the documentation of the transition of eruption style in the Martian volcanic history.The dataset is a record of Martian impact crater database analysis for the searching of degraded caldera constructs.