cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14201628
title: TABLE 3 in The diatom genus Longinata Hajós (Bacillariophyta): structure, relationships and distribution

description: TABLE 3. Species in the genus Kisseleviella (1985–2005)
KisseleviellaAuthor, DateLocalitySlideezoensisAkiba 1985JDS-8482, Kiroro formation, Hokkaido, Honbetsu-cho, JapanBRM Zu3/19magnaareolataAkiba &Yanagisawa 1985JDS-10649, Takatsuru Formation, Bösö Peninsula, Honshu, JapanBRM Zu3/17cuspidataGlezer et al. 1986ВосточнаЯ Камчатка, каньон Ольги [Eastern Kamchatka, Olga Canyon]KPGO 36/1-2cicatricataM.P.Olney in Olney et al. 2005Victora Land Basin, AntarcticaCAS 222022faballiformaM.P.Olney in Olney et al. 2005Victora Land Basin, AntarcticaCAS 222024gasterM.P.Olney in Olney et al. 2005Victora Land Basin, AntarcticaCAS 222023tricoronataM.P.Olney in Olney et al. 2005Victora Land Basin, AntarcticaCAS 222021
description: Published as part of Williams, David M. & Sims, Pat A., 2023, The diatom genus Longinata Hajós (Bacillariophyta): structure, relationships and distribution, pp. 215 in Phytotaxa 591 (3) on page 215, DOI: 10.11646/phytotaxa.591.3.3, http://zenodo.org/record/7800839
DOI: 10.5281/zenodo.14201629
title: TABLE 4 in The diatom genus Longinata Hajós (Bacillariophyta): structure, relationships and distribution

description: TABLE 4. Genera added to Cymatosiraceae (1985–2017), all currently extant, all monotypic except Cymatosirella (4 species); with respect to proposed monotypic taxa, examination of the results from Dąbek et al. (2019), for example, would place Pseudoleyanella in Leyanella, Pierrecomperia in Exotubocellulus, and Lambertocellus with some species of Cymatosira, the latter genus being non-monophyletic (Dąbek et al. (2019), yielding an alternative classification.
NameAuthorDatePseudoleyanella lunulataTakano1985Lennoxia faveolataH.A.Thomsen & K.Buck in H.A.Thomsen et al.1993Hyalinella lateripunctataWitkowski et al.2000Pierrecomperia catenuloidesSabbe, Vyverman & Ribero in Sabbe et al.2010Syvertsenia ibericaWitkowski & Anna Gomes in Gomes et al.2013Cymatosirella capensisDąbek, Witkowski & Sabbe in Dąbek et al.2013Lambertocellus africanaDąbek, Witkowski & Ashworth in Dąbek et al.2017
description: Published as part of Williams, David M. & Sims, Pat A., 2023, The diatom genus Longinata Hajós (Bacillariophyta): structure, relationships and distribution, pp. 216 in Phytotaxa 591 (3) on page 216, DOI: 10.11646/phytotaxa.591.3.3, http://zenodo.org/record/7800839
DOI: 10.5281/zenodo.14201630
title: TABLE 4 in The diatom genus Longinata Hajós (Bacillariophyta): structure, relationships and distribution

description: TABLE 4. Genera added to Cymatosiraceae (1985–2017), all currently extant, all monotypic except Cymatosirella (4 species); with respect to proposed monotypic taxa, examination of the results from Dąbek et al. (2019), for example, would place Pseudoleyanella in Leyanella, Pierrecomperia in Exotubocellulus, and Lambertocellus with some species of Cymatosira, the latter genus being non-monophyletic (Dąbek et al. (2019), yielding an alternative classification.
NameAuthorDatePseudoleyanella lunulataTakano1985Lennoxia faveolataH.A.Thomsen & K.Buck in H.A.Thomsen et al.1993Hyalinella lateripunctataWitkowski et al.2000Pierrecomperia catenuloidesSabbe, Vyverman & Ribero in Sabbe et al.2010Syvertsenia ibericaWitkowski & Anna Gomes in Gomes et al.2013Cymatosirella capensisDąbek, Witkowski & Sabbe in Dąbek et al.2013Lambertocellus africanaDąbek, Witkowski & Ashworth in Dąbek et al.2017
description: Published as part of Williams, David M. & Sims, Pat A., 2023, The diatom genus Longinata Hajós (Bacillariophyta): structure, relationships and distribution, pp. 216 in Phytotaxa 591 (3) on page 216, DOI: 10.11646/phytotaxa.591.3.3, http://zenodo.org/record/7800839
DOI: 10.5281/zenodo.14201634
title: Table 2 in A new genus and species of spring snails (Caenogastropoda, Tateidae) from the ultramafic South of New Caledonia

description: Table 2. Measurements of 22 shells. Measurements in mm. Abbreviations: AH = aperture height; AW =aperture width; BWW= body whorl width; cv = coefficient of variation; max = maximum; min = minimum; sd = standard deviation; SH = shell height; SW =shell width; W= number of whorls.
SHSWAHAWBWWSH/SWWholotype1.180.610.490.340.421.943.88min1.050.550.440.320.471.793.50max1.280.680.530.380.562.014.00mean1.180.620.490.350.621.903.78sd0.070.040.030.020.040.050.15cv5.696.105.834.676.102.633.96
description: Published as part of Schröder, Ove, Schächinger, Peter M., Bouchet, Philippe & Haase, Martin, 2024, A new genus and species of spring snails (Caenogastropoda, Tateidae) from the ultramafic South of New Caledonia, pp. 289 in European Journal of Taxonomy 968 on page 289, DOI: 10.5852/ejt.2024.968.2737, http://zenodo.org/record/14186039
DOI: 10.5281/zenodo.14201633
title: Table 2 in A new genus and species of spring snails (Caenogastropoda, Tateidae) from the ultramafic South of New Caledonia

description: Table 2. Measurements of 22 shells. Measurements in mm. Abbreviations: AH = aperture height; AW =aperture width; BWW= body whorl width; cv = coefficient of variation; max = maximum; min = minimum; sd = standard deviation; SH = shell height; SW =shell width; W= number of whorls.
SHSWAHAWBWWSH/SWWholotype1.180.610.490.340.421.943.88min1.050.550.440.320.471.793.50max1.280.680.530.380.562.014.00mean1.180.620.490.350.621.903.78sd0.070.040.030.020.040.050.15cv5.696.105.834.676.102.633.96
description: Published as part of Schröder, Ove, Schächinger, Peter M., Bouchet, Philippe & Haase, Martin, 2024, A new genus and species of spring snails (Caenogastropoda, Tateidae) from the ultramafic South of New Caledonia, pp. 289 in European Journal of Taxonomy 968 on page 289, DOI: 10.5852/ejt.2024.968.2737, http://zenodo.org/record/14186039
DOI: 10.5281/zenodo.14201637
title: Table 1 in A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato

description: Table 1. Strictly lichenicolous species of Arthrorhaphis with their host lichens and references.
TaxonHostsReferencesArthrorhaphis aeruginosaCladonia spp. squamules, rarely podetiaSantesson & Tønsberg, 1994Arthrorhaphis arctoparmeliaeArctoparmelia incurvaKocourková & Van den Boom, 2005Arthrorhaphis griseaBaeomyces rufus, B. placophyllusObermayer, 1994Arthrorhaphis muddiiDibaeis baeomycesObermayer, 1994Arthrorhaphis olivaceaeMelanohalea olivaceaSantesson & Tønsberg, 1994Arthrorhaphis phyllobaeisPhyllobaeis imbricataEtayo, 2017
description: Published as part of Frisch, Andreas, Ohmura, Yoshihito, Holien, Håkon & Bendiksby, Mika, 2022, A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato, pp. 937 in TAXON 71 (5) on page 937, DOI: 10.1002/tax.12718, http://zenodo.org/record/14047464
DOI: 10.5281/zenodo.14201638
title: Table 1 in A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato

description: Table 1. Strictly lichenicolous species of Arthrorhaphis with their host lichens and references.
TaxonHostsReferencesArthrorhaphis aeruginosaCladonia spp. squamules, rarely podetiaSantesson & Tønsberg, 1994Arthrorhaphis arctoparmeliaeArctoparmelia incurvaKocourková & Van den Boom, 2005Arthrorhaphis griseaBaeomyces rufus, B. placophyllusObermayer, 1994Arthrorhaphis muddiiDibaeis baeomycesObermayer, 1994Arthrorhaphis olivaceaeMelanohalea olivaceaSantesson & Tønsberg, 1994Arthrorhaphis phyllobaeisPhyllobaeis imbricataEtayo, 2017
description: Published as part of Frisch, Andreas, Ohmura, Yoshihito, Holien, Håkon & Bendiksby, Mika, 2022, A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato, pp. 937 in TAXON 71 (5) on page 937, DOI: 10.1002/tax.12718, http://zenodo.org/record/14047464
DOI: 10.5281/zenodo.14201639
title: Table 2 in A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato

description: Table 2. Results from the bGMYC analyses for mrSSU, nrITS, and RPB1 gene loci.
mrSSUnrITSRPB1Likelihood null model1231.2941199.2141160.623Maximum likelihood GMYC model1264.0521230.6141180.092Likelihood ratio65.5167962.8014138.93693Result of likelihood ratio test5.884182e-15***2.309264e-14***3.507144e-09***Number of maximum likelihood clusters with confidence interval in brackets10 (9–10)15 (15–15)12 (12–20)Number of maximum likelihood entities with confidence interval in brackets15 (14–15)19 (19–20)15 (15–30)Threshold time–0.002228722–0.007533381–0.002175746
description: Published as part of Frisch, Andreas, Ohmura, Yoshihito, Holien, Håkon & Bendiksby, Mika, 2022, A phylogenetic survey of the ascomycete genus Arthrorhaphis (Arthrorhaphidaceae, Lecanoromycetes) including new species in Arthrorhaphis citrinella sensu lato, pp. 944 in TAXON 71 (5) on page 944, DOI: 10.1002/tax.12718, http://zenodo.org/record/14047464
DOI: 10.6084/m9.figshare.26679350.v1
title: Additional file 5 of Novel lncRNAs LINC01221, RP11-472G21.2 and CRNDE are markers of differential expression in pediatric patients with T cell acute lymphoblastic leukemia

description: Supplementary Material 5
DOI: 10.6084/m9.figshare.26679353
title: Additional file 6 of Novel lncRNAs LINC01221, RP11-472G21.2 and CRNDE are markers of differential expression in pediatric patients with T cell acute lymphoblastic leukemia

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.26679353.v1
title: Additional file 6 of Novel lncRNAs LINC01221, RP11-472G21.2 and CRNDE are markers of differential expression in pediatric patients with T cell acute lymphoblastic leukemia

description: Supplementary Material 6
DOI: 10.6084/m9.figshare.25200750.v1
title: Additional file 2 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 2: List of HepG2 HLA-I class I peptides from MSFragger search.
DOI: 10.6084/m9.figshare.26679389
title: Additional file 3 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 3: Observed and predicted retention time of HLA-I class I peptides.
DOI: 10.6084/m9.figshare.26679389.v1
title: Additional file 3 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 3: Observed and predicted retention time of HLA-I class I peptides.
DOI: 10.6084/m9.figshare.25200750
title: Additional file 2 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 2: List of HepG2 HLA-I class I peptides from MSFragger search.
DOI: 10.6084/m9.figshare.26679392
title: Additional file 4 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 4: HepG2 mutation identified by whole exsome sequencing.
DOI: 10.6084/m9.figshare.26679392.v1
title: Additional file 4 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 4: HepG2 mutation identified by whole exsome sequencing.
DOI: 10.6084/m9.figshare.26679395
title: Additional file 5 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 5: Detailed data of HLA-I class I peptides Gibbs cluster.
DOI: 10.6084/m9.figshare.26679395.v1
title: Additional file 5 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 5: Detailed data of HLA-I class I peptides Gibbs cluster.
DOI: 10.6084/m9.figshare.26679398
title: Additional file 6 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 6: COSMIC mutation generated from COSMIC database.
DOI: 10.6084/m9.figshare.26679398.v1
title: Additional file 6 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 6: COSMIC mutation generated from COSMIC database.
DOI: 10.6084/m9.figshare.26679401
title: Additional file 7 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 7: Results of MSFragger search using HepG2 WES-based and COSMIC-based database.
DOI: 10.6084/m9.figshare.26679401.v1
title: Additional file 7 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 7: Results of MSFragger search using HepG2 WES-based and COSMIC-based database.
DOI: 10.6084/m9.figshare.26679404
title: Additional file 8 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 8: Detailed data of peptides binding affinity to HLA-I molecules.
DOI: 10.6084/m9.figshare.26679404.v1
title: Additional file 8 of COSMIC-based mutation database enhances identification efficiency of HLA-I immunopeptidome

description: Additional file 8: Detailed data of peptides binding affinity to HLA-I molecules.
DOI: 10.6084/m9.figshare.26679455
title: Additional file 3 of The use of predominance area diagrams (PAD) to determine the oxygen and sulfur fugacities prevailing during historical metallurgical processes: the case of fifteenth to seventeenth century copper slags from Polichno (Old Polish industrial district)

description: Additional file 3. logK values used in thermodynamic calculations, and a summary of results on the equilibrium constant between the metallic and oxide-sulfide phases.
DOI: 10.6084/m9.figshare.26679455.v1
title: Additional file 3 of The use of predominance area diagrams (PAD) to determine the oxygen and sulfur fugacities prevailing during historical metallurgical processes: the case of fifteenth to seventeenth century copper slags from Polichno (Old Polish industrial district)

description: Additional file 3. logK values used in thermodynamic calculations, and a summary of results on the equilibrium constant between the metallic and oxide-sulfide phases.
DOI: 10.6084/m9.figshare.26679557
title: Additional file 3 of Aspartyl protease in the secretome of honey bee trypanosomatid parasite contributes to infection of bees

description: Additional file 3. List of 94 L. passim exoproteome proteins.
DOI: 10.6084/m9.figshare.26679557.v1
title: Additional file 3 of Aspartyl protease in the secretome of honey bee trypanosomatid parasite contributes to infection of bees

description: Additional file 3. List of 94 L. passim exoproteome proteins.
DOI: 10.6084/m9.figshare.26679560
title: Additional file 4 of Aspartyl protease in the secretome of honey bee trypanosomatid parasite contributes to infection of bees

description: Additional file 4. List of 45 L. passim exoproteome proteins shared with seven Leishmania spp.
DOI: 10.6084/m9.figshare.26679560.v1
title: Additional file 4 of Aspartyl protease in the secretome of honey bee trypanosomatid parasite contributes to infection of bees

description: Additional file 4. List of 45 L. passim exoproteome proteins shared with seven Leishmania spp.
DOI: 10.15468/dl.d4d769
title: Occurrence Download

description: A dataset containing 196315 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is India",
 "TaxonKey is Psittacula cyanocephala (Linnaeus, 1766)",
 "Year 2000-2024"
 ]
}

 The dataset includes 196315 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072823-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.25203605
title: Additional file 1 of Mapping the distribution of Amblyomma americanum in Georgia, USA

description: Additional file 1: Dataset S1. Amblyomma americanum outcome data and predictors used for modeling.
DOI: 10.6084/m9.figshare.25203605.v1
title: Additional file 1 of Mapping the distribution of Amblyomma americanum in Georgia, USA

description: Additional file 1: Dataset S1. Amblyomma americanum outcome data and predictors used for modeling.
DOI: 10.15468/dl.whtrxz
title: Occurrence Download

description: A dataset containing 4733 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Mikania micrantha Kunth",
 "Year 2019-2024"
 ]
}

 The dataset includes 4733 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0072826-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26679662
title: Additional file 3 of Cancer patterns in Iran: a gender-specific spatial modelling of cancer incidence during 2014–2017

description: Additional file 3.
DOI: 10.6084/m9.figshare.26679662.v1
title: Additional file 3 of Cancer patterns in Iran: a gender-specific spatial modelling of cancer incidence during 2014–2017

description: Additional file 3.
DOI: 10.6084/m9.figshare.25210574
title: Additional file 1 of Horizontal gene transfer after faecal microbiota transplantation in adolescents with obesity

description: Additional file 1: Table S1. Number of participants in each group at each timepoint.
DOI: 10.6084/m9.figshare.25210574.v1
title: Additional file 1 of Horizontal gene transfer after faecal microbiota transplantation in adolescents with obesity

description: Additional file 1: Table S1. Number of participants in each group at each timepoint.
DOI: 10.6084/m9.figshare.25210804
title: Additional file 2 of Horizontal gene transfer after faecal microbiota transplantation in adolescents with obesity

description: Additional file 2: Table S2. Number of contigs with horizontal gene transfer (HGT) per sample from the WAAFLE output.
DOI: 10.6084/m9.figshare.25210804.v1
title: Additional file 2 of Horizontal gene transfer after faecal microbiota transplantation in adolescents with obesity

description: Additional file 2: Table S2. Number of contigs with horizontal gene transfer (HGT) per sample from the WAAFLE output.
DOI: 10.6084/m9.figshare.26679695
title: Additional file 4 of Network pharmacology-based strategy to investigate the mechanisms of artemisinin in treating primary Sjögren’s syndrome

description: Additional file 4.
DOI: 10.6084/m9.figshare.26679695.v1
title: Additional file 4 of Network pharmacology-based strategy to investigate the mechanisms of artemisinin in treating primary Sjögren’s syndrome

description: Additional file 4.
DOI: 10.6084/m9.figshare.25210613
title: Additional file 1 of ST218 Klebsiella pneumoniae became a high-risk clone for multidrug resistance and hypervirulence

description: Additional file 1: Table S1. The differences in SNPs of ST218 Klebsiella pneumoniae strains.
DOI: 10.6084/m9.figshare.25210613.v1
title: Additional file 1 of ST218 Klebsiella pneumoniae became a high-risk clone for multidrug resistance and hypervirulence

description: Additional file 1: Table S1. The differences in SNPs of ST218 Klebsiella pneumoniae strains.
DOI: 10.15156/bio/sh0200443.10fu
title: SH0200443.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0200444.10fu
title: SH0200444.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0200445.10fu
title: SH0200445.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0200446.10fu
title: SH0200446.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.