cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/smm6s6zv55.1
title: Numerical investigation of upward supercritical water flow with Joule heating effect (cases 1-4,6-8)

description: Manuscript title: Numerical investigation of upward supercritical water flow with Joule heating effect. 
Journal title: International Communication in Heat and Mass Transfer.
Software: ANSYS FLUENT 2021.
DOI: 10.17632/smm6s6zv55.2
title: Numerical investigation of upward supercritical water flow with Joule heating effect (cases 1-4,6-9)

description: Manuscript title: Numerical investigation of upward supercritical water flow with Joule heating effect. 
Journal title: International Communication in Heat and Mass Transfer.
Software: ANSYS FLUENT 2021.
DOI: 10.17632/smm6s6zv55.4
title: Numerical investigation of upward supercritical water flow with Joule heating effect (cases 1-4,6-9)

description: Manuscript title: Numerical investigation of upward supercritical water flow with Joule heating effect. Journal title: International Communication in Heat and Mass Transfer. Software: ANSYS FLUENT 2021.
DOI: 10.5281/zenodo.8412734
title: Graphic representation of data set for the project "IRI model performance evaluation for the Mexican region"

description: Here, we illustrate the modeling and experimental results for vertical Total Electron Content (TEC) over Mexico during the five year period 2018-2022. The results were obtained for the UCOE GNSS receiver station (geographic coordinates: 19.6°N; 101.68°W ). The calculations were made each two hours during the whole period under considerations. The modeling results were obtained using the "International Reference Ionosphere (IRI)" model, which is an empirical climatological model based on ground and space observations of the ionosphere [Bilitza et al., 2022].
description: Data Availability Statement: This work is based on GPS data from UCOE station provided by the TLALOCNet network of GNSS receivers (( http://tlalocnet.udg.mx , and http://132.248.208.61 last accessed on 25 December 2022). Acknowledgements. V.J. Gatica Acevedo express es his gratitude to CONA H CyT and to TL ALOCNet at Servicio de Geodesia Satelital [ Cabral Cano et al., 2018] and Luis Salazar Tlaczani at the Instituto de Geofísica, Universidad Nacional Autónoma de México (UNAM) with support from UNAM PAPIIT project IN107321, and the National Science Foundation grant 2025104 to the College of New Jersey, and also the GAGE facility operated by UNAVCO. V.J. Gatica Acevedo thank s the scientists and working groups of IRIMODEL.ORG for providing the opportunity of using their services online.
description: {"references": ["Bilitza, D., Pezzopane, M., Truhlik, V., Altadill, D., Reinisch, B. W., Pignalberi, A., The International Reference Ionosphere Model: A Review and Description of an Ionospheric Benchmark, Reviews of Geophysics, 60, 4, 2022, doi:10.1029/2022RG000792.", "Cabral Cano, E ., P\u00e9rez Campos, X., M\u00e1rquez Az\u00faa, B., Sergeeva, M.A., Salazar Tlaczan, L., DeMets, C., Adams, D., Galetzka, J., Hodgkinson, K., Feaux, K., TLALOCNet: A Continuous GPS Met Backbone in Mexico for Seismotectonic, and Atmospheric Research. Seismol., Res. Lett ., 89, 373 381, 2018, https://doi.org/10.1785/0220170190"]}
DOI: 10.5281/zenodo.8412733
title: Graphic representation of data set for the project "IRI model performance evaluation for the Mexican region"

description: Here, we illustrate the modeling and experimental results for vertical Total Electron Content (TEC) over Mexico during the five year period 2018-2022. The results were obtained for the UCOE GNSS receiver station (geographic coordinates: 19.6°N; 101.68°W ). The calculations were made each two hours during the whole period under considerations. The modeling results were obtained using the "International Reference Ionosphere (IRI)" model, which is an empirical climatological model based on ground and space observations of the ionosphere [Bilitza et al., 2022].
description: Data Availability Statement: This work is based on GPS data from UCOE station provided by the TLALOCNet network of GNSS receivers (( http://tlalocnet.udg.mx , and http://132.248.208.61 last accessed on 25 December 2022). Acknowledgements. V.J. Gatica Acevedo express es his gratitude to CONA H CyT and to TL ALOCNet at Servicio de Geodesia Satelital [ Cabral Cano et al., 2018] and Luis Salazar Tlaczani at the Instituto de Geofísica, Universidad Nacional Autónoma de México (UNAM) with support from UNAM PAPIIT project IN107321, and the National Science Foundation grant 2025104 to the College of New Jersey, and also the GAGE facility operated by UNAVCO. V.J. Gatica Acevedo thank s the scientists and working groups of IRIMODEL.ORG for providing the opportunity of using their services online.
description: {"references": ["Bilitza, D., Pezzopane, M., Truhlik, V., Altadill, D., Reinisch, B. W., Pignalberi, A., The International Reference Ionosphere Model: A Review and Description of an Ionospheric Benchmark, Reviews of Geophysics, 60, 4, 2022, doi:10.1029/2022RG000792.", "Cabral Cano, E ., P\u00e9rez Campos, X., M\u00e1rquez Az\u00faa, B., Sergeeva, M.A., Salazar Tlaczan, L., DeMets, C., Adams, D., Galetzka, J., Hodgkinson, K., Feaux, K., TLALOCNet: A Continuous GPS Met Backbone in Mexico for Seismotectonic, and Atmospheric Research. Seismol., Res. Lett ., 89, 373 381, 2018, https://doi.org/10.1785/0220170190"]}
DOI: 10.6084/m9.figshare.24258565
title: SNP PubMed Abstracts Text Corpus

description: Abstracts fetched are stored in a JSON file named `cached_abstracts.json`. In cases where an abstract is not available for a PMID, that PMID is recorded in a separate TSV file named `no_abstract.tsv`.- `read_pmids_from_file`: Extracts and returns unique PMIDs from file snp_mutation_data.tsv (Contains all the PMID where SNP's context is present).
DOI: 10.22011/strenda_db.v4ll20
title: A Bacterial Quorum Sensing Signal is a Potent Inhibitor of de novo Pyrimidine Biosynthesis in the Globally Abundant Emiliania huxleyi

description: Dihydroorotate dehydrogenase, R1EHA9, null
DOI: 10.6084/m9.figshare.24258571
title: S1 Bodyweight Data.xlsx

description: The effects of high cholesterol diet and saffron ethanolic extracts on the body weight of the early and established atherosclerotic New Zealand white rabbits.
DOI: 10.6084/m9.figshare.23709767
title: Assessment of genetic and morphological differentiation among populations of the Diederik Cuckoo <i>Chrysococcyx caprius</i>

description: The Diederik Cuckoo <i>Chrysococcyx caprius</i> is an African species widely distributed south of the Sahara, which migrates seasonally between breeding and nonbreeding sites. It is currently unknown whether the species consists of a single panmictic population or if it is genetically structured. To investigate this, we analysed sequence variation in three mitochondrial and two nuclear gene regions in combination with morphological measurements in specimens from four localities. Phylogenetic relationships were estimated using maximum-likelihood methods and included samples of Klaas’s Cuckoo <i>Chrysococcyx klaas</i>, Red-chested Cuckoo <i>Cuculus solitarius</i>, and African Cuckoo <i>Cuculus gularis</i>. Haplotype networks and analysis of molecular variance were used to characterise the spatial distribution of genetic diversity. A principal component analysis was performed to investigate morphological variation among localities. Molecular analysis identified two divergent mitochondrial lineages, which were found to occur in sympatry in one South African locality (Limpopo Province). The magnitude of divergence between versus within these lineages was low (0.4–1%) yet significant (<i>F</i><sub>ST</sub>: 0.84–0.88). Lack of apparent phylogeographic structure provides support for the absence of physical barriers to gene flow in this species. The divergent mitochondrial lineages did not differ in morphological measurements. The emergence and persistence of shallow mitochondrial divergence among sympatric lineages in the Diederik Cuckoo could be linked to maternal divergence in host selection of these brood parasites — a hypothesis requiring additional data to be tested.
DOI: 10.6084/m9.figshare.23709767.v1
title: Assessment of genetic and morphological differentiation among populations of the Diederik Cuckoo <i>Chrysococcyx caprius</i>

description: The Diederik Cuckoo <i>Chrysococcyx caprius</i> is an African species widely distributed south of the Sahara, which migrates seasonally between breeding and nonbreeding sites. It is currently unknown whether the species consists of a single panmictic population or if it is genetically structured. To investigate this, we analysed sequence variation in three mitochondrial and two nuclear gene regions in combination with morphological measurements in specimens from four localities. Phylogenetic relationships were estimated using maximum-likelihood methods and included samples of Klaas’s Cuckoo <i>Chrysococcyx klaas</i>, Red-chested Cuckoo <i>Cuculus solitarius</i>, and African Cuckoo <i>Cuculus gularis</i>. Haplotype networks and analysis of molecular variance were used to characterise the spatial distribution of genetic diversity. A principal component analysis was performed to investigate morphological variation among localities. Molecular analysis identified two divergent mitochondrial lineages, which were found to occur in sympatry in one South African locality (Limpopo Province). The magnitude of divergence between versus within these lineages was low (0.4–1%) yet significant (<i>F</i><sub>ST</sub>: 0.84–0.88). Lack of apparent phylogeographic structure provides support for the absence of physical barriers to gene flow in this species. The divergent mitochondrial lineages did not differ in morphological measurements. The emergence and persistence of shallow mitochondrial divergence among sympatric lineages in the Diederik Cuckoo could be linked to maternal divergence in host selection of these brood parasites — a hypothesis requiring additional data to be tested.
DOI: 10.25919/8rrj-vg13
title: Priorities for narrowing the yield gap and increasing farming systems resilience in the Fiji sugar industry: APSIM model, outputs and weather data

description: APSIM model, outputs and weather data used in Meier et al. (2023) published in Farming System.
DOI: 10.6084/m9.figshare.24258616
title: Glucose, Liver and Renal Function Test Data

description: The effects of high cholesterol diet and saffron ethanolic extracts on the glucose, liver function test, and renal function test of the early and established atherosclerotic New Zealand white rabbits.
DOI: 10.6084/m9.figshare.24256102.v1
title: Code and data for "Beam theory predicts muscle deformation and vertebral curvature during feeding in rainbow trout (<i>Oncorhynchus mykiss</i>)" published in Journal of Experimental Biology

description: Muscle strain and vertebral curvature data, analysis, and R code for beam-like bending in rainbow trout during suction feeding.Jimenez and Camp <b>Beam theory predicts muscle deformation and vertebral curvature during feeding in rainbow trout (</b><b><i>Oncorhynchus mykiss</i></b><b>)</b>Includes:README file describing code and data files<b>Code:</b>Rbook "trout_process.Rmd" to process raw dataRbook "trout_analyze" to analyze processed dataUser-defined functions "get_functions.R""analysis.zip" contains smoothed vertebral position data and predicted curvature and strain data, as produced by "trout_process.Rmd".<b>Data</b> "Data.zip" contains, for each individual and each strike, the 3D positions of muscle markers over time, each vertebra over time, and of the muscle markers at rest in a neutral position.<b> </b>See "README" for details.<br>
DOI: 10.6084/m9.figshare.24256102
title: Code and data for "Beam theory predicts muscle deformation and vertebral curvature during feeding in rainbow trout (<i>Oncorhynchus mykiss</i>)" published in Journal of Experimental Biology

description: Muscle strain and vertebral curvature data, analysis, and R code for beam-like bending in rainbow trout during suction feeding.Jimenez and Camp <b>Beam theory predicts muscle deformation and vertebral curvature during feeding in rainbow trout (</b><b><i>Oncorhynchus mykiss</i></b><b>)</b>Includes:README file describing code and data files<b>Code:</b>Rbook "trout_process.Rmd" to process raw dataRbook "trout_analyze" to analyze processed dataUser-defined functions "get_functions.R""analysis.zip" contains smoothed vertebral position data and predicted curvature and strain data, as produced by "trout_process.Rmd".<b>Data</b> "Data.zip" contains, for each individual and each strike, the 3D positions of muscle markers over time, each vertebra over time, and of the muscle markers at rest in a neutral position.<b> </b>See "README" for details.<br>
DOI: 10.6084/m9.figshare.24258625
title: Hematological Analysis Data

description: The effects of high cholesterol diet and saffron ethanolic extracts on the hematological analysis of the early and established atherosclerotic New Zealand white rabbits.
DOI: 10.25919/pe3m-5s31
title: Parkes observations for project P1186 semester 2023APRS_04

description: The multi-frequency observation of the subpulse drifting of PSR J0934-5249 with Parkers. the PSR J0934-5249 was observed at a single frequency (325 MHz) using the GMRT. Its single pulse sequence shows clear coherent drifting with some short nulls. 2DFS plot also shows a clear feature confirming that this pulsar is a coherent drifter. The number of nulls were small for us to study any null induced drift rate changes in this pulsar. Arun Naidu et al. 2017 Estimated the drifting and nulling parameters for the first time in this pulsar. The observations using the Giant Meterwave Radio Telescope for PSR J0934-5249, but there was no further explanation of the pulsar (Basu et al. 2021). Both observations were made at low broadband. We propose using the ultra wideband reciver of Parkes to observe these pulsars for a long time, so that to give a detailed analysis of these pulsar on the wide bandwidth.
DOI: 10.5281/zenodo.8412941
title: Sub-diffusion and Caging

description: The folder contains diffusion data of crowded protein solutions.
DOI: 10.5281/zenodo.8412942
title: Sub-diffusion and Caging

description: The folder contains diffusion data of crowded protein solutions.
DOI: 10.21227/0srx-f626
title: communities_Crime

description: A crime is a deliberate act that can cause physical or psychological harm, as well as property damage or loss, and can lead to punishment by a state or other authority according to the severity of the crime. The number and forms of criminal activities are increasing at an alarming rate, forcing agencies to develop efficient methods to take preventive measures. In the current scenario of rapidly increasing crime, traditional crime-solving techniques are unable to deliver results, being slow paced and less efficient. Thus, if we can come up with ways to predict crime, in detail, before it occurs, or come up with a “machine” that can assist police officers, it would lift the burden of police and help in preventing crimes. To achieve this, we suggest including machine learning (ML) and computer vision algorithms and techniques. In this paper, we describe the results of certain cases where such approaches were used, and which motivated us to pursue further research in this field. The main reason for the change in crime detection and prevention lies in the before and after statistical observations of the authorities using such techniques. The sole purpose of this study is to determine how a combination of ML and computer vision can be used by law agencies or authorities to detect, prevent, and solve crimes at a much more accurate and faster rate. In summary, ML and computer vision techniques can bring about an evolution in law agencies.
DOI: 10.5281/zenodo.8387827
title: National Park Hunsrück Hochwald Forest Disturbance Dataset

description: The Geopackage contains polygonized data representing field observations of tree damage caused by bark beetles, wind, or selective logging spanning from the year 2016 to 2022. Attribute table information: <strong>Class</strong>: The forest type and damaging agent. More than one agent can be present. <strong>Disturbance_Year</strong>: year of disturbance as reported by the ground team or as observed in very-high resolution images (digital orthophotos). CRS: EPSG 25832 **NOTES: 1- Some topology errors might be present in the data. 2- Miss matched forest type or land cover could be present.
description: In case of using the dataset in your publication, please cite this repository.
DOI: 10.5281/zenodo.8387826
title: National Park Hunsrück Hochwald Forest Disturbance Dataset

description: The Geopackage contains polygonized data representing field observations of tree damage caused by bark beetles, wind, or selective logging spanning from the year 2016 to 2022. Attribute table information: <strong>Class</strong>: The forest type and damaging agent. More than one agent can be present. <strong>Disturbance_Year</strong>: year of disturbance as reported by the ground team or as observed in very-high resolution images (digital orthophotos). CRS: EPSG 25832 **NOTES: 1- Some topology errors might be present in the data. 2- Miss matched forest type or land cover could be present.
description: In case of using the dataset in your publication, please cite this repository.
DOI: 10.6084/m9.figshare.24258427
title: output.tar

description: result scores after re-ranking with RetroRanker.
DOI: 10.6084/m9.figshare.24258427.v1
title: output.tar

description: result scores after re-ranking with RetroRanker.
DOI: 10.6084/m9.figshare.24236875
title: Nature Post-Doctoral Survey 2023

description: <i>Springer Nature </i>conducted the second iteration of a survey run in 2020 that focuses on the experiences of postdoctoral researchers, as this audience has been described as ‘the neglected part of the scientific workforce’. Research agency <i>Shift </i>conducted a review of the questions from the 2020 survey and 10 cognitive interviews to inform the wording of new questions and the rewording of previous questions where necessary. A survey was launched in 3 languages in June 2023. We received 6,571 responses, of which 3,838 were useable as the final sample.
DOI: 10.15151/esrf-es-1316874830
title: Identification of a potential new sub family of DNA polymerase in bacteriophages.

description: Bacteriophages (bacterial viruses) are the most abundant organisms on earth. In order to replicate, bacteriophages hijack and eventually kill bacteria, making them a potential useful tool to treat bacterial infection. They contain the biggest diversity of modified nucleobases observed in nature so far, that prevent them from cleavage by host restriction endonucleases. However, this modified alphabet of nucleobases can make the genome of such bacteriophages resistant to sequencing by commercial polymerases. The discovery of a polymerase capable of reading any type of modified genomic DNA would be a great tool for the knowledge of this hidden viral world. Recently, the bacteriophage YERA41, that infects Yersinia ruckeri bacteria, was isolated. It appears to be an unconventional phage that contains hypermodified thymidine in its genomic DNA, that only the phage DNA polymerase (DNAP) can replicate.
DOI: 10.18712/nsd-nsd2743-v4
title: Norwegian Citizen Panel Round 15, 2019

description: The Norwegian Citizen Panel is a platform for internet surveys of public opinion in important areas of society and politics in Norway. Participants are randomly recruited from the Norwegian population register, and they are encouraged to participate over time. The panel was fielded for the first time the fall of 2013 and as of 2017 the survey is carried out three times a year. The University of Bergen owns and is responsible for the Citizen panel. The company ideas2evidence recruits respondents, produces the survey, and provides documentation of the data. Data is stored and shared by Sikt - Norwegian Agency for Shared Services in Education and Research. For access to time series data, or text data, please contact DIGSSCORE. The Norwegian Citizen Panel welcomes research proposals for survey content. More information about calls and other updates are available at www.medborger.uib.no

The full answer choices for all questions can be found in the codebook, which is located further down the page.
DOI: 10.18712/nsd-nsd2902-v3
title: Norwegian Citizen Panel Round 16, 2019

description: The Norwegian Citizen Panel is a platform for internet surveys of public opinion in important areas of society and politics in Norway. Participants are randomly recruited from the Norwegian population register, and they are encouraged to participate over time. The panel was fielded for the first time the fall of 2013 and as of 2017 the survey is carried out three times a year. The University of Bergen owns and is responsible for the Citizen panel. The company Ideas 2 Evidence recruits respondents, produces the survey, and provides documentation of the data. Data is stored and shared by Sikt - Norwegian Agency for Shared Services in Education and Research. For access to time series data, or text data, please contact DIGSSCORE. The Norwegian Citizen Panel welcomes research proposals for survey content. More information about calls and other updates is available at www.medborger.uib.no http://www.medborger.uib.no

The full answer choices for all questions can be found in the codebook, which is located further down the page.
DOI: 10.18712/nsd-nsd2903-v4
title: Norwegian Citizen Panel Round 17, 2020

description: The Norwegian Citizen Panel is a platform for internet surveys of public opinion in important areas of society and politics in Norway. Participants are randomly recruited from the Norwegian population register, and they are encouraged to participate over time. The panel was fielded for the first time the fall of 2013 and as of 2017 the survey is carried out three times a year. The University of Bergen owns and is responsible for the Citizen panel. The company Ideas 2 Evidence recruits respondents, produces the survey, and provides documentation of the data. Data is stored and shared by Sikt - Norwegian Agency for Shared Services in Education and Research. For access to time series data, or text data, please contact DIGSSCORE. The Norwegian Citizen Panel welcomes research proposals for survey content. More information about calls and other updates is available at www.medborger.uib.no http://www.medborger.uib.no

The full answer choices for all questions can be found in the codebook, which is located further down the page.
DOI: 10.6084/m9.figshare.24258676
title: Dataset of Tropical Cyclone Intensity in Eastern China over the Past 2,000 Years

description: Reconstructed Dataset of Tropical Cyclone Intensity in Eastern China over the Past 2,000 Years