cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.stqjq2c5h
title: Data for: Spatial structure within root systems moderates stability of Arbuscular Mycorrhizal mutualism and plant-soil feedbacks

description: The persistence of mutualisms is paradoxical, as there are fitness
 incentives for exploitation.  This is particularly true for
 plant-microbe mutualisms like arbuscular mycorrhizae (AM), which are
 promiscuously horizontally-transmitted.  Preferential allocation
 by hosts to the best mutualist can stabilize horizontal mutualisms,
 however, preferential allocation is imperfect, with its fidelity likely
 depending upon the spatial structure of symbionts in plant
 roots.  In this study, we tested AM mutualisms’ dependence on two
 dimensions of spatial structure: the initial spatial association of fungi
 and the ease of fungal dispersal, through three complementary experiments.
 We found that fitness of the beneficial AM fungus increased when fungi
 were initially separate, while initial spatial mixing benefited the
 fitness of the non-beneficial fungus. These effects were strongest when
 dispersal was limited, and hosts could discriminate. 
 Additionally, we found that changes in AM fungal proportional abundance
 induced by spatial structure in roots of a preferentially allocating host
 produced positive feedbacks on plant growth, showing that interactions
 between spatial structure and host choice can determine the direction of
 plant-soil feedbacks.  Our results suggest that symbiont spatial
 structure within plant roots may act as an important modifier of plant
 preferential allocation and the dynamics of mycorrhizal mutualisms, with
 potentially cascading effects on plant-plant interactions.
description: An updated version of this dataset has been published. Please
 visit this link: https://doi.org/10.5061/dryad.s1rn8pk8z
DOI: 10.7280/d1pm5m
title: Data and code for: Explainable machine learning revealed the conditional response of biogenic isoprene to the changes in environmental factors at an urban site in the Yangtze River Delta, China

description: Biogenic isoprene is highly sensitive to environmental conditions while
 the confounding factors makes it challenging to identify the causal
 response. We report here an enhanced isoprene concentration from biogenic
 source during May to October at an urban site in the Yangtze River Delta,
 China. Random forest coupled with Shapley additive explanations dependence
 algorithm was used to determine the conditional response of biogenic
 isoprene to the changes in environmental factors. The conditional response
 of isoprene concentration exponentially increased as temperature
 increased, in line with previous laboratory control experiment. Sharp
 increase in isoprene concentration was observed with the onset of solar
 radiation but remained unchanged at higher solar radiation. A near-linear
 decrease in isoprene was evident as O3 increased. These results show how
 the biogenic isoprene concentration responds to a changing environmental
 condition without confounding factors, provide parameterization of
 isoprene in local air quality and vegetation-climate feedback.
DOI: 10.5281/zenodo.18183752
title: Dataset: Strain boosts propanol electrosynthesis from CO
DOI: 10.5281/zenodo.18183751
title: Dataset: Strain boosts propanol electrosynthesis from CO
DOI: 10.5061/dryad.7wm37pvwh
title: Higher intelligence is genetically linked with longevity

description: Epidemiological studies in different populations, in different countries,
 and in different epochs consistently showed that high intelligence is
 positively correlated with longevity. Despite the definitive association,
 the reason of the linkage between higher intelligence and longevity has
 remained unknown. Here, we show by using Drosophila
 melanogaster that both higher intelligence and longevity are
 genetically linked. The high intelligent D.
 melanogaster (INT) lived longer than non-intelligent flies
 (NINT), 26.40% and 21.35% in male and female, respectively. The
 bidirectional selective breeding based on intelligence extended lifespans
 gradually generation by generation in INT breeding and reverse in NINT
 breeding. The INT of F12 generation lived longer than NINT of
 F12 generation, 63.91% for male and 67.88% for female, as a
 result from slower aging. Whole-genome analysis showed that the genetic
 linkage of higher intelligence with longevity was determined by the genes
 of the pathways of ribosome, autophagy, and genome stability.
DOI: 10.26165/juelich-data/t16xme
title: Role of extreme events for the acceptance of sustainable heat supply (ExtrA) - Data

description: In our project "Grassroots movement in the energy transition (ExtrA)", we focus on private heat supply of citizens in Germany. We are going to analyze the acceptance of different energy sources in temporal development by means of representative surveys. The results are to be discussed in civil dialogues and to be framed by an advisory board. This way we can deduce how attitudes and acceptance differ and evolve and how durable attitude changes are. One of the focal points in this context is the role of extreme events such as the war in the Ukraine and the question whether such events have the potential to convince even scepticts. Core elements of the studies will be Discrete-Choice Experiments (DCE) and Multi-Criteria Decision Analysis (MCDA), with which we are going to describe scenarios that will be openly accessible.
DOI: 10.5061/dryad.cjsxksn7r
title: Data from: Analysis of altered level of blood-based biomarkers in the prognosis of COVID-19 patients

description: Introduction: Immune and inflammatory responses developed by the patients
 with Coronavirus Disease 2019 (COVID-19) during rapid disease progression
 result in an altered level of biomarkers. Therefore, this study aimed to
 analyze levels of blood-based biomarkers that are significantly altered in
 patients with COVID–19. Methods: A cross-sectional study was
 conducted among COVID-19 diagnosed patients admitted to the tertiary care
 hospital. Several biomarkers – biochemical, hematological, inflammatory,
 cardiac, and coagulatory – were analyzed and subsequently tested for
 statistical significance at P&lt;0.01 by using SPSS version 17.0.
 Results: A total of 1,780 samples were analyzed from
 1,232 COVID-19 patients (median age 45 years [IQR 33-57]; 788 [63.96%]
 male). The COVID-19 patients had significantly (99% CI, p&lt;0.001)
 elevated glucose, urea (p=0.001), alanine transaminase (ALT), aspartate
 aminotransaminase (AST), alkaline phosphatase (ALP), lactate dehydrogenase
 (LDH) levels, total white blood cell count (WBC), C-reactive protein
 (CRP), procalcitonin (PCT), interleukin-6 (IL-6), ferritin, D-Dimer, and
 creatinine phosphokinase-MB (CPK-MB, p=0.004) as compared to control
 group. However, the levels of total protein, albumin, and platelets were
 significantly lowered in COVID-19 patients as compared to control group.
 The elevated levels of glucose, urea, direct bilirubin, WBC, CRP,
 prothrombin time (PT), D-Dimer, and LDH were significantly associated with
 in-hospital mortality among COVID-19 patients. Conclusions: Assessing and
 monitoring the elevated levels of glucose, urea, ALT, AST, ALP, ferritin,
 DB, WBC, CRP, PCT, LDH, D-Dimer, PT, and CPK-MB and the lowered levels of
 total protein, albumin, and platelet could provide a basis for evaluation
 of improved prognosis and effective treatment in patients with COVID-19.
DOI: 10.5061/dryad.8cz8w9gt5
title: Predator cannibalism can shift prey community composition toward dominance by small prey species

description: Cannibalism among predators is a key intraspecific interaction affecting
 their density and foraging behaviour, eventually modifying the strength of
 predation on heterospecific prey. Interestingly, previous studies showed
 that cannibalism among predators can increase or reduce predation on
 heterospecific prey; however we know less about the factors that lead to
 these outcomes. Using a simple pond community consisting
 of Hynobius retardatus salamander larvae and their
 associated prey, I report empirical evidence that cannibalism among
 predators can increase predation on large heterospecific prey but reduce
 that on small heterospecific prey. In a field-enclosure experiment in
 which I manipulated the occurrence of salamander cannibalism, I found that
 salamander cannibalism increased predation on frog tadpoles but reduced
 that on aquatic insects simultaneously. The contrasting effects are most
 likely to be explained by prey body size. In the study system, frog
 tadpoles were too large for non-cannibal salamanders to consume, while
 aquatic insects were within the non-cannibals’ consumable prey size range.
 However, when cannibalism occurred, a few individuals that succeeded in
 cannibalising reached large enough size to consume frog tadpoles.
 Consequently, although cannibalism among salamanders reduced their
 density, salamander cannibalism increased predation on large prey frog
 tadpoles. Meanwhile, salamander cannibalism reduced predation on small
 prey aquatic insects probably because of a density reduction of
 non-cannibals primarily consuming aquatic insects. Body size is often
 correlated with various ecological traits, for instance, diet width,
 consumption and excretion rates, and is thus considered as a good
 indicator of species’ effects on ecosystem function. All this considered,
 cannibalism among predators could eventually affect ecosystem function by
 shifting the size composition of the prey community.
DOI: 10.5061/dryad.8kprr4xqx
title: An exploration of trends and future directions in sustainability performance

description: Current global economic activities are increasingly being perceived as
 unsustainable. With Sustainable Development Goals (SDGs) statement in
 2015, sustainability performance has received significant attention from
 academics and practitioners. Thus, it is necessary to better understand
 the topics of interest and expand cooperation networks to advance studies
 in integrated efforts. The present bibliometric research intends to assess
 worldwide research tendency in sustainability performance on the
 foundation of publishing outputs, co-authorships amongst authors and
 affiliated countries, and cooccurrences of author keywords, as well as to
 identify gaps and make research recommendations. The analysis has
 reviewed, retrieved and analysed 3680 papers, which were published from
 1997 to 2021. The outcomes reveal that since 1997, the sum of publications
 has been on the rise steadily. About a third of all global papers on
 sustainability performance was produced by researchers from the United
 States and Australia, outnumbering the remaining 138
 countries/territories. Furthermore, among the 10 most prolific authors in
 sustainability performance, their current affiliations all belong to the
 university. Finally, this study proposes a significant research gap for
 future study of practitioners and researchers. The social sustainability
 and the relationship between the material flow analysis and sustainability
 performance should be noted.
description: How was this dataset collected: This data is This paper was based on the Scopus database
 core collection to guarantee the data's scientific and completeness.
 Based on the research question and objectives, the article
 searching keywords were established. Retrieved by Topic = “sustainability
 performance” or “triple bottom line” or “TBL”, the timespan is 1997–2021,
 and the retrieval time is 13 October 2021.
 How has it been proceed: Four inclusion criteria
 (IC) were established: IC1: To include papers that should contain the research subject, which was “sustainability performance”, and the research premises/objective should match the paper's objective. IC2: To include papers that eliminated letters, editorials, duplications, book reviews, conference proceedings and unpublished research. IC3: To include only papers within the analysis time (1997-2021). IC4: To include papers that limited the research fields (called "subject area" in databases) to environmental science, engineering, commercial activities, economy and society-wise research, and decision-making sciences. The inclusion criteria aided in selecting articles, and only articles that met all these criteria were selected.
DOI: 10.5061/dryad.sbcc2fr8m
title: Ecological specialisation and range size determine intraspecific body size variation in a speciose clade of insect herbivores

description: The body size of an adult insect is strongly determined by the
 environmental factors to which it is exposed during growth and
 development. Insect species confronted with a high environmental
 variability across their geographical range (i.e., wide ecological niche
 breadth) may therefore reveal broader variation in body size than those
 species which are more specialised (i.e., narrow ecological niche). In
 this study, we aim to investigate whether characteristics related to the
 ecological niche breadth of a holometabolous insect species (i.e., its
 ecological specialisation) affect its intraspecific variation in adult
 body size. By using European geometrid moths as a model group, we
 specifically tested whether latitudinal range size, larval resource use,
 and voltinism affect intraspecific body size variation. We hypothesised
 that plasticity will increase along with latitudinal range and larval diet
 breadth. We further expected that univoltine species reveal a lower body
 size variation compared to those with multiple generations per year. To
 test these hypotheses, we compiled a comprehensive trait database for 631
 species of European geometrid moths from literature, including information
 on adult body size, life history, and distribution. We further
 reconstructed a molecular phylogeny including all analysed geometrid
 species and applied phylogenetic comparative methods in order to test our
 predictions. In support of our hypotheses, we found that intraspecific
 size variation is positively related to latitudinal range size and larval
 diet breadth, and that multivoltine species reveal a higher heterogeneity
 in body size than taxa with a strictly univoltine life style. Based on our
 results, we demonstrated that intraspecific body size variation in
 geometrid moths is negatively related to ecological specialisation. We
 further suggest that increased variation in body size with increasing
 niche breadth is a general pattern, which likely applies to many other
 insect groups as well. This assumption, however, demands further empirical
 scrutiny.
description: 1.We created a species list of European geometrid moths
 (Lepidoptera: Geometridae) 2. We obtained information
 on moth body size (males only!), larval host plant use, latitudinal
 distribution, and voltinism based on available literature and online
 sources. 3. Published barcode sequences and nuclear
 sequences were otbained from BOLD and GenBank in order to create a
 phylogney of geometrid moths. 4. Phylogenetic
 comparative methods (PGLS analyses; phylANOVA) were applied in order to
 analyse the data.
description: 1. The
 subfamily Sterrhinae is excluded 2. Geometrid species
 without available sequence data and/or reliable host plant information are
 not included. 3. Wingssize data refer to males
 only! 4. Only reliable host plant information was
 considered (host plant information obtained solely from rearings or
 doubtful records were omitted).
DOI: 10.5061/dryad.6m905qg27
title: Phylogeny of the Ordovician and Silurian members of the order Atrypida

description: The brachiopod order Atrypida originated in the Middle Ordovician and went
 extinct in the Late Devonian. Few cladistic studies have been undertaken
 for this group. Here we investigate their early evolution through the
 Silurian time. We present a parsimony-based phylogenetic analysis of 41
 characters and 70 genera representing all the early taxonomic groups
 within the order. The stratigraphic record of the fossil genera analysed
 here strongly supports the parsimony phylogeny. Most currently recognized
 subfamilies and families may be identified within clades, except for the
 Atrypinae, Idiospirinae, and the Septatrypidae. This warrants subdivision
 of the former and redefinition of the two latter. The subfamily Atrypinae
 is redefined and a new subfamily of the Atrypidae, the Protatrypinae is
 split off. Tracing character evolution across the tree indicates that
 calcified spiralia and a jugum or jugal processes characterize all members
 of the Atrypida, except the most basal clade, the Cyclospiridae, that
 lacks a calcified jugum. Ribs are a homoplasious character, occurring in
 numerous clades throughout the tree. Darriwillian through Sandbian was a
 time with rapid evolution when most new autapomorphies seen in the
 atrypides evolved. This interval is part of the Great Ordovician
 Biodiversification Event (GOBE). Solid teeth, dorsal direction of
 spiralia, elaborate ornamentation, and frills evolved in the latest Katian
 into early Silurian time. Solid teeth and dorsally directed spiralia, seen
 in distantly related clades from the latest Katian on, may be analogous
 features. The Late Ordovician Mass Extinction (LOME) is indicated in the
 stratigraphic tree together with a possible event at the end of Aeronian.
 The tree supports the long-held assumptions that the Plectatrypinae
 evolved from the Spirigerininae. It further suggests that the genus
 Tuvaella is included with the Davidsonioidea. Likewise, the redefined
 Atrypinae is a sister group of the Lissatrypidae and a derived group in
 the phylogenetic tree.
description: The Treatise (Copper 2002) lists 66 Ordovician and Silurian
 genera in the order Atrypida.  We coded these genera for 41 discrete,
 unweighted, unordered, binary, and multistate morphological characters
 (Table 1, Figs. 1, 2). Defined or redefined genera described after 2002
 yielded 13 additional taxa, for a total of 79. Our final dataset had 70
 genera after eliminating 12 genera with incomplete character sets and the
 addition of three supplementary Devonian genera (see below). We analysed
 the data with parsimony analysis with PAUP version 4.01 (Swofford
 & Sullivan 2003), using heuristic search methods with 1000
 replications. The data were also analysed with the program TNT with both
 traditional search methods and a new method search.
description: Mesquite: Mesquite
 Project PAUP: PAUP*
DOI: 10.5061/dryad.9p8cz8wjs
title: Breeding biology of two populations of Chinese penduline tits

description: The phenotypes and breeding behavior in one species may be different
 between populations. The local environments, social interactions can all
 lead to some variations in life history. The thorough investigations of
 breeding biology over populations can provide insights for us to
 understand the evolution and diversifications of breeding systems and
 phenotypic traits from multiple perspectives other than drawing monotonous
 associations between a factor and a trait. In this study, we explored two
 Chinese penduline populations, Liaohekou (LHK) and Xianghai (XH), both in
 the northeast of China located 550 km away from each other. A comparative
 study of the breeding biology was carried on in the two populations. We
 found that the climate has no obvious difference in these two populations
 but has different habitats. Nest emergence and egg-laying were earlier in
 the more northern population XH. Males in XH has a lower chance of pairing
 up with a female and exhibit mainly biparental care pattern instead
 uniparental care that we reported in LHK. The chick fledgling success in
 the biparental care nests was higher than in the uniparental care nests in
 XH, but no difference to the uniparental care nests in LHK. Besides, the
 penduline tits in the two populations were also significantly different in
 their wing length, tail length and beak shape. These incongruences
 suggested different food availability, adult sex ratio and migration
 distances of the two populations. Future studies should experimentally
 investigate the joint influences of breeding perspectives on the evolution
 of parental care and mating system.
DOI: 10.5061/dryad.k98sf7m80
title: Data from: A hierarchical model for jointly assessing ecological and anthropogenic impacts on animal demography

description: 1. The management of sustainable harvest of animal populations is of great
 ecological and conservation importance. Development of formal quantitative
 tools to estimate and mitigate the impacts of harvest on animal
 populations has positively impacted conservation efforts. 2. The vast
 majority of existing harvest models, however, do not simultaneously
 estimate ecological and harvest impacts on demographic parameters and
 population trends. Given that the impacts of ecological drivers are often
 equal to or greater than the effects of harvest, and can covary with
 harvest, this disconnect has the potential to lead to flawed inference. 3.
 In this study, we used Bayesian hierarchical models and a 43-year
 capture-mark-recovery dataset from 404,241 female mallards (Anas
 platyrhynchos) released in the North American midcontinent to estimate
 mallard demographic parameters. Further, we model the dynamics of
 waterfowl hunters and habitat, and the direct and indirect effects of
 anthropogenic and ecological processes on mallard demographic parameters.
 4. We demonstrate that density-dependence, habitat conditions, and harvest
 can simultaneously impact demographic parameters of female mallards, and
 discuss implications for existing and future harvest management models. 5.
 Our results demonstrate the importance of controlling for
 multicollinearity among demographic drivers in harvest management models,
 and provide evidence for multiple mechanisms that lead to partial
 compensation of mallard harvest. We provide a novel model structure to
 assess these relationships that may allow for improved inference and
 prediction in future iterations of harvest management models across taxa.
DOI: 10.5061/dryad.x3ffbg7n0
title: Effects of season length and uniparental care efficiency on the evolution of parental care

description: Parental care patterns differ enormously among and even within species. In
 Chinese penduline tits (Remiz pendulinus), for example,
 biparental care, female-only care, male-only care, and biparental
 desertion all occur in the same population; moreover, the distribution of
 care patterns differs systematically between populations. By means of an
 individual-based model, we show that such diversity can readily evolve. We
 report five main findings. First, under a broad range of parameters,
 different care patterns (e.g. male care and biparental care) coexist at
 equilibrium. Second, for many parameters, alternative evolutionary
 outcomes are possible; this can explain differences in care patterns
 across populations. Third, rapid evolutionary transitions can occur
 between alternative equilibria; this can explain the often-reported
 evolutionary lability of parental care patterns. Fourth, season length has
 a strong but non-monotonic effect on the evolved care patterns. Fifth,
 when uniparental care efficiency is low, biparental care tends to evolve;
 however, in many scenarios uniparental care is still common at
 equilibrium. Our study sheds new light on Triver’s hypothesis that the sex
 with the highest pre-zygotic investment is predestined to invest a lot
 post-zygotically as well. We also discuss the implications of climate
 change, which simultaneously affects season length and efficiency of
 parental care.