cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14305096.v1
title: Temporal-spatial differences in and influencing factors of agricultural eco-efficiency in Shandong Province, China

description: ABSTRACT: Based on the panel data of 134 counties (cities and districts) from 1998 to 2017, the temporal-spatial variation characteristics and influencing factors of agricultural eco-efficiency in Shandong Province were analyzed by using various methods, such as the super-efficiency SBM (slacks-based measure) model considering undesired output and the STIRPAT (stochastic impacts by regression on population, affluence, and technology) model, which helps clarify the improvements needed for agricultural eco-efficiency and provides a basis for the development of ecological agriculture in Shandong Province. Results showed the following: (1) During 1998-2017, the agricultural eco-efficiency of Shandong Province showed a fluctuating increasing tendency, but the overall efficiency value wasrelatively low. (2) The agricultural eco-efficiency of Shandong Province had a significant regional disparity, and its spatial agglomeration gradually weakened. The spatial distribution had a sporadic distribution of high value areas at first and then gradually formed the “low-high-low-high” zonal distribution from west to east. (3) The net income per capita of farmers and the added value of the primary industry had a significantly positive correlation with the agricultural eco-efficiency of Shandong Province, while the mechanization level, the planting area per capita, the level of financial support to agriculture and the planting structure exhibited a mainly negative correlation with the agricultural eco-efficiency of Shandong Province. Moreover, the added value of the primary industry and the financial support to agriculture in the 0.75 quantile had no significant influence on the agricultural eco-efficiency of Shandong Province, and the planting structure in the 0.25 and 0.75 quantiles also had no significant influence.
DOI: 10.6084/m9.figshare.14305088.v1
title: Fungi on irrigated rice seeds produced in the pre-germinated system in the Alto Vale do Itajaí region, Santa Catarina state, Brazil

description: ABSTRACT: The aim of this research was to identify and quantify fungi infecting irrigated rice seeds produced in the 2015/16, 2016/17 and 2017/18 harvests in the pre-germinated system in the Alto Vale do Itajaí Region, Santa Catarina State, Brazil. A total of 479 lots of eight cultivars were analyzed. Seeds were disinfected and sown in potato-sucrose-agar culture medium with incubation for seven days at 25ºC ± 2ºC and photoperiod of 12 hours. The main fungus detected in the three crops season was Microdochium albescens with 54.9% of average incidence, followed by Alternaria padwikii (7.7%) and Bipolaris oryzae (3.3%).
DOI: 10.6084/m9.figshare.14305085.v1
title: Physicochemical quality and consumer discrimination of industrial and traditional fermented sausages

description: ABSTRACT: Salami tipo Italiáno (“Italian Salami”) and Linguiça Colonial (“Colonial Sausage”) are fermented sausages widely consumed in southern Brazil and commonly confused by consumers. Colonial sausages often characterized by greater diversity of physicochemical and sensory qualities, which often can weaken a product’s identity. The aim of the present study was to evaluate the description and discrimination of brands of Italian Salami and Colonial Sausage using the “check-all-that- apply” technique by consumers and in parallel to relate the sensory perception to the physicochemical qualities of the fermented sausages. Results revealed a lack of physicochemical and sensory standardization for the Colonial Sausage brands (traditional). Sensory evaluations were most effective for discriminating industrial and traditional sausages. Through the check-all-that apply technique, consumers described and discriminated the samples, and set a standard for better hedonic acceptance of fermented sausages.
DOI: 10.6084/m9.figshare.14305083.v1
title: Soil macrofauna as bioindicator of the recovery of degraded Cerrado soil

description: ABSTRACT: The construction of the hydroelectric power plant of Ilha Solteira, in state of São Paulo, was initiated in the 1960s, when an average, 8.60 m of soil depth was removed, resulting in a degraded area. A plan for the recovery of the area started in 2005 in Selvíria /MS with the use of plant species adapted to the Cerrado biome. This study aimed to evaluate the soil macrofauna of an area under recovery by using different types of soil cover (1- bare soil (control); 2- native Cerrado vegetation; 3- specie Astronium fraxinifolium; 4- Astronium fraxinifolium + Canavalia ensiformis; 5- Astronium fraxinifolium + Raphanus sativus; 6- Astronium fraxinifolium + Brachiaria decumbens + sewage sludge). Soil macrofauna was evaluated in 2005, 2006 and 2007 using the direct collection method and manual counting. Number of species, diversity and uniformity index were determined. Principal component analysis (PCA) and cluster analysis were used for data interpretation. Results showed that treatment 6 (Astronium fraxinifolium+ Brachiaria decumbens+ sewage sludge) increased the soil macrofauna population by approximately 4 to 6 times more than the other types of cover after three years of evaluation. And the PCA and cluster analysis showed the approximation of the data between treatment 6 and Cerrado, which represents the most appropriate treatment for the recovery of the degraded soil.
DOI: 10.6084/m9.figshare.14305082.v1
title: Endophytic Enterobacter cloacae exhibits antagonistic activity against Pythium damping-off of cucumber

description: ABSTRACT: The study was performed to examine the potential presence of biological control agents against Pythium damping-off disease of cucumber.Examining eleven bacterial strains isolated from acid lime roots and rhizosphere soil showed that the bacterial strain RB1 was the most efficient in suppressing mycelial growth of P. aphanidermatum, producing an inhibition zone of 5mm. Scanning electron microscopy study of the mycelia at the interaction zone showed that the pathogen hyphae were deformed and shriveled by the bacterial strain.In pot experiments, pretreatment with the RB1 bacterial strain reduced disease incidence significantly by 63%.The bacterial strain did not exhibit any negative significant effects on cucumber growth (plant height and root dry weight) in comparison with untreated control under growth chamber conditions. Molecular identification of strain RB1 based on the 16S rRNA gene revealed that it is Enterobacter cloacae. Findings from this study suggested that E. cloacae has a potential to be used as a biocontrol agent for suppressingcucumber damping-off disease caused by P. aphanidermatum. This is the first report of the antagonistic activity of E. cloacae against P. aphanidermatum-induced damping-off of cucumber.
DOI: 10.6084/m9.figshare.14305081.v1
title: Validation of device for detection of metallic foreign bodies in cattle

description: ABSTRACT: The ingestion of foreign bodies, mainly metallic (MFB- metallic foreign body), by cattle is frequent and can lead to death. For diagnostic purposes, reticular pain tests are routinely used, and ferroscopy is still unusual, even as a diagnostic aid. The objective of this study was to validate the application of the GMS 120 Professional BOSCH® metal detector (MD) in the detection of MFB in the bovine species and describe its use in field cases. Fifty MFBs of varying shape, size, and weight were evaluated with an MD, initially on a flat and inert surface, and then in a permanent rumen fistulated cow. Retrospectively, a database from 2000 to 2017 with 122015 cattle was accessed, of which 31865 were examined after the introduction of MD usage in 2013. Fifteen cows positive for reticular pain tests were prospectively evaluated and eight cows were diagnosed with MFB through MD usage. The mean distance for MFB best detection on the inert surface was 4.6 cm. In the fistulated cow, it was not possible to detect any MFBs, regardless of the size or weight of the material. The MFB detection capacity increased with MD use, which can be considered a diagnostic aid in specific situations. Depending on the body condition of the bovine, false negatives may occur with the use of GMS 120 Professional Bosch® metal detector.
DOI: 10.6084/m9.figshare.14305078.v1
title: Senecavirus A (SVA) in finishing swine: diagnosis and viral isolation

description: ABSTRACT: Senecavirus A (SVA) has been a problem in Brazil since the end of 2014. The infections caused by SVA have disrupted the productive chain in Brazil, as it can be confused with foot-and-mouth disease. Although, the virus has remained endemic in the country, an increase in the number of cases of the disease was observed in 2018. The aim of the present study was to conduct the differential diagnosis of foot-and-mouth disease in an outbreak of vesicular disease in finishing swine. Animals (160-170 days old) were kept on a farm with 6000 pigs in Minas Gerais State, Brazil. The morbidity and mortality rates were 20% and 2.2%, respectively. The diagnosis was performed by RT-PCR, using primers that determine the amplification of an internal region of the 3D gene. Furthermore, samples were inoculated into BHK-21 cell culture for viral isolation. In the first passage under cultivation, a cytopathogenic effect compatible with SVA replication (rounding and detachment of the cell monolayer) was observed. The viral identity was confirmed using two additional assays: indirect immunofluorescence assay (IFA) and nucleotide sequencing. Both tests confirmed that the infection was caused by SVA. In summary, we described a method for the diagnosis and viral isolation of SVA, a virus that arrived in Brazil in 2014 and has become endemic in the country.
DOI: 10.6084/m9.figshare.14305076.v1
title: Ornithonyssus sylviarum (Acari: Macronyssidae) parasitism among poultry farm workers in Minas Gerais state, Brazil

description: ABSTRACT: Ornithonyssus sylviarum is a hematophagous mite present in wild, domestic, and synanthropic birds. However, this mite can affect several vertebrate hosts, including humans, leading to dermatitis, pruritus, allergic reactions, and papular skin lesions. This study evaluated the epidemiological characteristics of O. sylviarum attacks on poultry workers, including data on laying hens, infrastructure and management of hen houses, and reports of attacks by hematophagous mites. In addition, a case of mite attack on a farm worker on a laying farm in the Midwest region in Minas Gerais is presented. It was found that 60.7% farm workers reported attacks by hematophagous mites. Correspondence analysis showed an association between reports of mite attacks in humans with (1) presence of O. sylviarum in the hen house, (2) manual removal of manure by employees, and (3) history of acaricide use. The specimens collected from the location were confirmatively identified as O. sylviarum. O. sylviarum attacks ave not been reported when manure was removed in a shorter time interval and did not use acaricide in the sheds when the removal was done by manure conveyor belt. Parasitism by O. sylviarum should be considered a relevant occupational hazard affecting employees working in direct contact with commercial egg-laying hens in Minas Gerais. We emphasized the need to monitor hen infestations by this mite to improve the development of mite control strategies.
DOI: 10.17036/researchdata.aston.ac.uk.00000496
title: The dynamics of auditory stream segregation: Effects of sudden changes in frequency, level, or modulation
DOI: 10.6084/m9.figshare.14305073.v1
title: Adenosquamous carcinoma of the cervical oesophagus in a dog

description: ABSTRACT: A 9-year-old male Shih Tzu dog presented with a mass on the ventral region of the neck and developed ptyalism. Radiographs revealed a radiodense nodule located in the mid-third of the oesophagus compressing the trachea. Preoperative cytology showed large neoplastic cells with abundant vacuolated cytoplasm arranged in clusters. The nodule was removed by oesophagectomy and submitted for histopathology. Microscopically, the oesophageal mass was multilobulated and unencapsulated. It had a mixed cellular growth pattern with areas showing squamous and glandular differentiation. The squamous component of the tumor was formed by solid strands of neoplastic epithelial cells; many neoplastic cells had undergone central keratinization and sometimes formed keratin pearls. The deeper adenocarcinomatous portion of the tumor consisted of tubules filled with slightly basophilic mucinous material. Histological and immunohistochemical examination confirmed the diagnosis of primary adenosquamous carcinoma (ASC) of the esophagus. This is the first report of primary ASC of the cervical oesophagus in a dog.
DOI: 10.6084/m9.figshare.14305071.v1
title: Enhanced conjugated linoleic acid and biogas production after ruminal fermentation with Piper betle L. supplementation

description: ABSTRACT: Piper betle L. is edible plant richer in polyphenols that might improve feed utilization in rumen diet. The objective of the present study was to investigate the effect of various Piper betle L. powder (PL) doses on in vitro rumen microorganisms, ruminal biogas and fermentation end-product production, and biohydrogenation including lipolysis-isomerization. The completely randomized design used five levels of PL supplementation (0, 25, 50, 75 and 100 mg DM) incubated with 400 mg of a basal substrate of Pangola hay and concentrate (50:50). The matrix compounds (g/kg DM) of 0.27 catechin, 0.11 rutin, 3.48 quercetin, 0.41 apigenin, 0.04 myricetin, 0.27 kaempferol, 0.76 eugenol and 0.22 caryophyllene derived from PL altered the fermentation pattern, with an increase in degradable nutrients and total volatile fatty acids and acetogenesis without shifting pH during fermentation. These values promoted in vitro gas production, with higher carbon dioxide and lower methane production. Although, hydrogen recovery from lipolysis-isomerization in biohydrogenation was limited, PL successfully promoted stearic acid (C18:0) accumulation by changing the biohydrogenation pathway of fatty acids, causing more C18:1 trans-11 rather than C18:2 trans-11, cis-15. Consequently, this resulted in more conjugated linoleic acid (CLA) cis-9, trans-11, CLA trans-10, cis-12 and CLA trans-11, cis-13. Enhanced PL supply increased total bacteria and fungal zoospores due to a reduction in rumen protozoa. In conclusion, our results demonstrated that PL is a feed additive with potential for ruminants, promising improved ruminal fermentation and biohydrogenation, while reducing methane production.
DOI: 10.6084/m9.figshare.14305069.v1
title: Behavior of spoilage bacteria and Salmonella enterica subspecies enterica O:4,5 in vacuum-packaged beef during refrigeration

description: ABSTRACT: In this study, the kinetic parameters of mesophilic, psychrotrophic and lactic acid bacteria in vacuum-packed beef at 1 °C and 4 °C were estimated from experimental growth curves produced by samples stored during 21 and 60 days, respectively. In a separate experiment, the survival of multidrug resistant (MDR) Salmonella enterica O:4,5 at 1°C was also characterized. The shelf-life of vacuum-packed beef stored at 4 °C was estimated at 16.1 days (95% CI: 14.8 - 17.3 days), whereas at 1 °C it was longer than 21 days because the mesophiles count estimated towards the end of the experiment was 12.5 ln CFU.g-1 (95% CI: 11.8 - 13.3 ln CFU.g-1) which is lower than the shelf-life reference value. At 1 °C, inoculated Salmonella was reduced in 6.61 ln CFU.g-1 (2.87 log CFU.g-1). These results demonstrated the importance of establishing in legislation, especially in Brazil, standard values of deteriorating microorganisms in beef for maintaining product quality.
DOI: 10.6084/m9.figshare.14305067.v1
title: SSR and ISSR markers in assessing genetic diversity in Gallus gallus domesticus: a quantitative analysis of scientific production

description: ABSTRACT: Poultry meat is a major source of animal protein in the world. Research indicates a high inbreeding rate derived from a relative absence of heterozygous subpopulations of chicken from different suppliers. Molecular markers can provide information for the genetic basis of chicken consumed in rural areas and help establishing a chicken database for product quality and warranty. The bibliometric research, comprises between 1994 and 2018, from five previously selected databases: Google Scholar, PubMed, ScienceDirect, Scopus and Web of Science, using the following descriptors: ‘microsatellites’, ‘SSR’, ‘ISSR’, ‘genetic variability’ and ‘genetic diversity’, all of them coupled to ‘chicken’ and/or ‘birds’ results in 66 scientific publications. The publications were then categorized according to their titles to the use of ISSR or SSR markers. They were also addressed by countries according first author cited. The publications data appointed that countries with the height production of poultry meat and hens are the most interested in the genetic diversity study of these species. The SSR markers, due to its more specific characteristic, are more frequently applied to genetic diversity assignment, compared to ISSR.
DOI: 10.6084/m9.figshare.14305065.v1
title: Milk fraud by the addition of whey using an artificial neural network

description: ABSTRACT: The adulteration of milk by the addition of whey is a problem that concerns national and international authorities. The objective of this research was to quantify the whey content in adulterated milk samples using artificial neural networks, employing routine analyses of dairy milk samples. The analyses were performed with different concentrations of whey (0, 5, 10, and 20%), and samples were analyzed for fat, non-fat solids, density, protein, lactose, minerals, and freezing point, totaling 164 assays, of which 60% were used for network training, 20% for network validation, and 20% for neural network testing. The Garson method was used to determine the importance of the variables. The neural network technique for the determination of milk fraud by the addition of whey proved to be efficient. Among the variables of highest relevance were fat content and density.
DOI: 10.6084/m9.figshare.14305063.v1
title: Yield increase of corn inoculated with a commercial arbuscular mycorrhizal inoculant in Brazil

description: ABSTRACT: Arbuscular mycorrhizal fungi (AMF) play an important role in plant growth. However, there are no reports of legally commercialized AMF-based inoculants for agricultural crops in Brazil. The objective of this research was to evaluate the agronomic efficiency of a Rhizophagus intraradices inoculant in combination with phosphate fertilization in grain yield of corn under different edaphoclimatic conditions in Brazil. Experiments were conducted in five Brazilian states (Goiás, Mato Grosso, Minas Gerais, Rio Grande do Sul and Santa Catarina) in a 2 x 3 factorial scheme, with two inoculation treatments (inoculated and non-inoculated seeds) and three doses of phosphate fertilization (0, 50 and 100% of the recommended P). At the end of the crop cycle (stages R4-R5), inoculation provided increases in biomass (average of 48%) regardless of the applied dose of P, higher P absorption, and 54% average increase in grain yield. In conclusion, the mycorrhizal inoculant increases biomass yield, P uptake and corn grain yield under different edaphoclimatic conditions in Brazil, especially in soils that originally had low or medium levels of available P.
DOI: 10.6084/m9.figshare.14305061.v1
title: Risk factors related to seropositivity for Leptospira spp. in horses in the Serra Catarinense region

description: ABSTRACT: Leptospirosis is a zoonotic infectious disease caused by the bacterium Leptospira spp. The consequences of infection in horses are unclear, and the serogroups involved vary depending on the region. This study aimed to evaluate the seropositivity of unvaccinated horses in the Serra Catarinense region and the possible risk factors associated with the infection. We used 207 horses from 26 properties, with no clinical history of infection and unvaccinated for leptospirosis. We submitted serum samples to the microscopic agglutination serum (SAM) to obtain the main reference serogroups. We considered animals with titre ≥100 as infected. The results of the serology revealed seropositivity in 45.4% (94/207) of the animals studied. The most frequent antibodies reportedwere those against the serogroups Australis 16.9% (35/207), Ichterhaemorrhagiae 14.4% (30/207), and Grippotyphosa 5.31% (11/207). Among the primary risk factors associated with the infection we reported extensive rearing system (OR = 1.27; P&lt;0.05) and the presence of other animal species such as cattle (OR = 3.85; P&lt;0.01) and capybaras (OR = 2.07; P=0.06). The findings presented in this study showed that leptospirosis is endemic in horses in the Serra Catarinense region, and revealed the need for emergency surveillance and control measures specific to this important zoonosis.
DOI: 10.6084/m9.figshare.14305060.v1
title: Socio-economic and technological typology of avocado cv. Hass farms from Antioquia (Colombia)

description: ABSTRACT: A typology of avocado cv. Hass farms was constructed based on information collected from productive units in Antioquia, Colombia. The study aimed to provide key information about the farms for those involved in the design of programs and public policies directed to growers. The data were scrutinized through Multiple Correspondence Analysis (MCA) and Cluster Analysis. The sample was made up of 214 growers of the crop. Quantitative and qualitative variables were employed for the MCA, which rendered 40 dimensions, out of which 16 accounted for 70% of the total inertia (variance) found in the data. These 16 dimensions were used as input for the Cluster Analysis, which provided the following results: 52%, 32% and 15% of the farms were located in Clusters 1, 2 and 3, respectively. The identified farm types can be associated to peasant (Cluster 1) and commercial (Cluster 3) agricultural schemes, plus a transition between them (Cluster 2). The most discriminating variables regarding such categorization were: farm size, farm registry at ICA (Colombian Agricultural Institute), Avocado cv. Hass yield, labor source, presence of crops other than avocado, existence of formal commercial alliances and technical assistance type. The percentage of farmers belonging to grower organizations was high in the three clusters. Growers in Clusters 3 and 2 had established formal commercial alliances which enabled them to access better sale prices for the crop. A trend towards establishing cv. Hass as a monocrop is observed, which may threaten both crop biodiversity and the food security of peasant growers.