cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.782860
title: Raw Data For Figures Used In Manuscript - Highly Parallel Single-Molecule Identification Of Proteins In Zeptomole-Scale Mixtures

description: Raw Image files used for generating the figures (Fig 2, Fig3, Fig4, Fig5 and Fig6, Supplementary figures, files needed for background subtraction and image processing tutorial (docker image)) in the manuscript - Highly parallel single-molecule identification of proteins in zeptomole-scale mixtures

Use command tar xfz[v] *.tar.gz to retain the file structure.  

Docker image in image processing tutorial works on Linux platforms only.

File structure after un-compressing each *.tar.gz is as follows - 

1. acetylated_background_signalsFiles.tar.gz

    - Folders for the different experiments with the name expt[1..30]

             - *SIGNALS.pkl - Pickle file (python encoded) containing the information of the histogram of the peptide step-drops

     - acetylated_backgroundFiles_list.csv (file formatted for performing iterative_background.py)

     - README.txt (information on the contents and the use of the files in the directory)

2. fig2.tar.gz

     - fig2A/ (contains raw image folders, processed_results and README.txt)

     - fig2B/ (contains raw image folders, processed_results and README.txt)

2. fig3and4.tar.gz

     - acPeptide_label-2-5/ (contains raw image folders, processed_results)

     - bocPeptide_label-2-5/ (contains raw image folders, processed_results)

     - README.txt

3. fig5.tar.gz

     - fig5A_panel1/ (contains raw image folders, processed_results and README.txt)

     - fig5A_panel2/ (contains raw image folders, processed_results and README.txt)

     - fig5B_A2/ (contains raw image folders, processed_results and README.txt)

     - fig5B_A3/ (contains raw image folders, processed_results and README.txt)

     - fig5B_B1/ (contains raw image folders, processed_results and README.txt)

     - fig5B_B2/ (contains raw image folders, processed_results and README.txt)

     - fig5C/ (contains raw image folders, processed_results and README.txt)

     - fig5D/ (contains raw image folders, processed_results and README.txt)

5. fig6.tar.gz

     - fig6B_top/ (contains raw image folders, processed_results and README.txt)

     - fig6B_bottom/ (contains raw image folders, processed_results and README.txt)

6. fig_supplementary08.tar.gz

     - (contains raw image folders, processed_results and README.txt)

7. fig_supplementart12.tar.gz

     - supplementary_fig14A/ (contains raw image folders, processed_results and README.txt)

     - supplementary_fig14B/ (contains raw image folders, processed_results and README.txt)

8. imageProcessingTutorial.tar.gz

     - walkthrough_docker_image.tar.xz (contains the docker image with necessary code pre-installed. Includes small example dataset; Works only in linux docker and not macOS)

     - README.txt (information on the image processing tutorial).
description: Contact Jagannath Swaminathan ( jagannath[at]utexas[dot]com ) for information about the uploaded files
DOI: 10.5517/ccdc.csd.cc1n8jl1
title: CCDC 1527543: Experimental Crystal Structure Determination

description: Related Article: Ran Zhao, Lei Mei, Kong-qiu Hu, Ming Tian, Zhi-fang Chai, Wei-qun Shi|2018|Inorg.Chem.|57|6084|doi:10.1021/acs.inorgchem.8b00634
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1ywhmy
title: CCDC 1813891: Experimental Crystal Structure Determination

description: Related Article: Eunji Lee, Seul-Gi Lee, In-Hyeok Park, Seulgi Kim, Huiyeong Ju, Jong Hwa Jung, Mari Ikeda, Yoichi Habata, Shim Sung Lee|2018|Inorg.Chem.|57|6289|doi:10.1021/acs.inorgchem.8b00154
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1ywhnz
title: CCDC 1813892: Experimental Crystal Structure Determination

description: Related Article: Eunji Lee, Seul-Gi Lee, In-Hyeok Park, Seulgi Kim, Huiyeong Ju, Jong Hwa Jung, Mari Ikeda, Yoichi Habata, Shim Sung Lee|2018|Inorg.Chem.|57|6289|doi:10.1021/acs.inorgchem.8b00154
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1ywq2m
title: CCDC 1814091: Experimental Crystal Structure Determination

description: Related Article: Ran Zhao, Lei Mei, Kong-qiu Hu, Ming Tian, Zhi-fang Chai, Wei-qun Shi|2018|Inorg.Chem.|57|6084|doi:10.1021/acs.inorgchem.8b00634
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1ywq3n
title: CCDC 1814092: Experimental Crystal Structure Determination

description: Related Article: Ran Zhao, Lei Mei, Kong-qiu Hu, Ming Tian, Zhi-fang Chai, Wei-qun Shi|2018|Inorg.Chem.|57|6084|doi:10.1021/acs.inorgchem.8b00634
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1ywq5q
title: CCDC 1814094: Experimental Crystal Structure Determination

description: Related Article: Ran Zhao, Lei Mei, Kong-qiu Hu, Ming Tian, Zhi-fang Chai, Wei-qun Shi|2018|Inorg.Chem.|57|6084|doi:10.1021/acs.inorgchem.8b00634
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1ywq6r
title: CCDC 1814095: Experimental Crystal Structure Determination

description: Related Article: Ran Zhao, Lei Mei, Kong-qiu Hu, Ming Tian, Zhi-fang Chai, Wei-qun Shi|2018|Inorg.Chem.|57|6084|doi:10.1021/acs.inorgchem.8b00634
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1ywq7s
title: CCDC 1814096: Experimental Crystal Structure Determination

description: Related Article: Ran Zhao, Lei Mei, Kong-qiu Hu, Ming Tian, Zhi-fang Chai, Wei-qun Shi|2018|Inorg.Chem.|57|6084|doi:10.1021/acs.inorgchem.8b00634
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yx2hf
title: CCDC 1814445: Experimental Crystal Structure Determination

description: Related Article: Han Geul Lee, Hyuna Jo, Sunhwi Eom, Dong Won Kang, Minjung Kang, Jeremy Hilgar, Jeffrey D. Rinehart, Dohyun Moon, Chang Seop Hong|2018|Cryst.Growth Des.|18|3360|doi:10.1021/acs.cgd.8b00064
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yz5lp
title: CCDC 1816463: Experimental Crystal Structure Determination

description: Related Article: D. Dawson Beattie, Gautier Lascoumettes, Pierre Kennepohl, Jennifer A. Love, Laurel L. Schafer|2018|Organometallics|37|1392|doi:10.1021/acs.organomet.8b00074
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yz5mq
title: CCDC 1816464: Experimental Crystal Structure Determination

description: Related Article: D. Dawson Beattie, Gautier Lascoumettes, Pierre Kennepohl, Jennifer A. Love, Laurel L. Schafer|2018|Organometallics|37|1392|doi:10.1021/acs.organomet.8b00074
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yz5nr
title: CCDC 1816465: Experimental Crystal Structure Determination

description: Related Article: D. Dawson Beattie, Gautier Lascoumettes, Pierre Kennepohl, Jennifer A. Love, Laurel L. Schafer|2018|Organometallics|37|1392|doi:10.1021/acs.organomet.8b00074
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yz5ps
title: CCDC 1816466: Experimental Crystal Structure Determination

description: Related Article: D. Dawson Beattie, Gautier Lascoumettes, Pierre Kennepohl, Jennifer A. Love, Laurel L. Schafer|2018|Organometallics|37|1392|doi:10.1021/acs.organomet.8b00074
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1yz5qt
title: CCDC 1816467: Experimental Crystal Structure Determination

description: Related Article: D. Dawson Beattie, Gautier Lascoumettes, Pierre Kennepohl, Jennifer A. Love, Laurel L. Schafer|2018|Organometallics|37|1392|doi:10.1021/acs.organomet.8b00074
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z0lm6
title: CCDC 1817828: Experimental Crystal Structure Determination

description: Related Article: Subrata Mukherjee, Arghya Ghosh, Udaya Kiran Marelli, Akkattu T. Biju|2018|Org.Lett.|20|2952|doi:10.1021/acs.orglett.8b00998
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z0nl7
title: CCDC 1817889: Experimental Crystal Structure Determination

description: Related Article: Mi-Na Zhao, Zhi-Jing Zhang, Zhi-Hui Ren, De-Suo Yang, Zheng-Hui Guan|2018|Org.Lett.|20|3088|doi:10.1021/acs.orglett.8b01139
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z0nn9
title: CCDC 1817891: Experimental Crystal Structure Determination

description: Related Article: Mi-Na Zhao, Zhi-Jing Zhang, Zhi-Hui Ren, De-Suo Yang, Zheng-Hui Guan|2018|Org.Lett.|20|3088|doi:10.1021/acs.orglett.8b01139
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z1k8v
title: CCDC 1818747: Experimental Crystal Structure Determination

description: Related Article: Celestine Seow, Muhammad Luthfi Bin Ismail, Hong-Wei Xi, Yongxin Li, Kok Hwa Lim, Cheuk-Wai So|2018|Organometallics|37|1368|doi:10.1021/acs.organomet.8b00044
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z1k9w
title: CCDC 1818748: Experimental Crystal Structure Determination

description: Related Article: Celestine Seow, Muhammad Luthfi Bin Ismail, Hong-Wei Xi, Yongxin Li, Kok Hwa Lim, Cheuk-Wai So|2018|Organometallics|37|1368|doi:10.1021/acs.organomet.8b00044
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zsz91
title: CCDC 1841254: Experimental Crystal Structure Determination

description: Related Article: Daniel Kratzert|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zszg6
title: CCDC 1841259: Experimental Crystal Structure Determination

description: Related Article: Mark E Light, Elena Cerrada and Mariano Laguna|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zt060
title: CCDC 1841282: Experimental Crystal Structure Determination

description: Related Article: Kazuhiro Moriwaki, Haruo Akashi|2013|Bull. Res. Inst. Nat. Sci.,Okayama Uni. Sci.|39|3|
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.1241096
title: Results From Performance Evaluation And Testing Of Virtual Infrastructure Managers

description: NFV leverages Cloud Computing principles to move the data-plane network functions from expensive, closed and proprietary hardware to so-called Virtual Network Functions (VNFs). We deal with the management of virtual computing resources (Unikernels) for the execution of VNFs. This functionality is performed by the Virtual Infrastructure Manager (VIM) in the NFV MANagement and Orchestration (MANO) reference architecture. In this data set we report the results of a performance evaluation we have realized of three open source VIMs, namely OpenStack, Nomad and OpenVIM; both considering stock and the tuned versions. The VIMs and the performance evaluation tools that we employ are provided openly and can be downloaded from our repositories (https://github.com/superfluidity/openvim4unikernels and https://github.com/netgroup/vim-tuning-and-eval-tools).
DOI: 10.5281/zenodo.1241097
title: Results From Performance Evaluation And Testing Of Virtual Infrastructure Managers

description: NFV leverages Cloud Computing principles to move the data-plane network functions from expensive, closed and proprietary hardware to so-called Virtual Network Functions (VNFs). We deal with the management of virtual computing resources (Unikernels) for the execution of VNFs. This functionality is performed by the Virtual Infrastructure Manager (VIM) in the NFV MANagement and Orchestration (MANO) reference architecture. In this data set we report the results of a performance evaluation we have realized of three open source VIMs, namely OpenStack, Nomad and OpenVIM; both considering stock and the tuned versions. The VIMs and the performance evaluation tools that we employ are provided openly and can be downloaded from our repositories (https://github.com/superfluidity/openvim4unikernels and https://github.com/netgroup/vim-tuning-and-eval-tools).
DOI: 10.5517/ccdc.csd.cc1z4mg6
title: CCDC 1821698: Experimental Crystal Structure Determination

description: Related Article: Brandon R. Smith, Jon T. Njardarson|2018|Org.Lett.|20|2993|doi:10.1021/acs.orglett.8b01031
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z5gn8
title: CCDC 1822510: Experimental Crystal Structure Determination

description: Related Article: Michal Hušák, Alexandr Jegorov, Jan Rohlícek, Andrew Fitch, Jirí Czernek, Libor Kobera, Jirí Brus|2018|Cryst.Growth Des.|18|3616|doi:10.1021/acs.cgd.8b00402
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1z5gp9
title: CCDC 1822511: Experimental Crystal Structure Determination

description: Related Article: Michal Hušák, Alexandr Jegorov, Jan Rohlícek, Andrew Fitch, Jirí Czernek, Libor Kobera, Jirí Brus|2018|Cryst.Growth Des.|18|3616|doi:10.1021/acs.cgd.8b00402
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zt0ld
title: CCDC 1841294: Experimental Crystal Structure Determination

description: Related Article: Mark E Light and Brian Murphy|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zt0mf
title: CCDC 1841295: Experimental Crystal Structure Determination

description: Related Article: Mark E Light and Brian Murphy|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zt0ng
title: CCDC 1841296: Experimental Crystal Structure Determination

description: Related Article: Mark E Light and Brian Murphy|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zt0ph
title: CCDC 1841297: Experimental Crystal Structure Determination

description: Related Article: Mark E Light and Brian Murphy|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc1zt0qj
title: CCDC 1841298: Experimental Crystal Structure Determination

description: Related Article: Mark E Light and Brian Murphy|2018|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.