cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/r2b5svrcrs
title: Combined plasma levels of IL-10 and testosterone, but not soluble HLA-G5, predict the risk of death in COVID-19 patients

description: In the manuscript "Combined plasma levels of IL-10 and testosterone, but not soluble HLA-G5, predict the risk of death in COVID-19 patients" (doi: 10.1111/andr.13334), we reported that the combined evaluation of IL-10 and testosterone predicts the risk of death in men with COVID-19.
The two datasets here loaded (Raw_data_1 and Raw_data_2) contain all the clinical and immunological data, supporting our conclusions, that have been used to build the manuscript. An additional file (raw_data_description) contains the main guidelines to correctly associate the raw data with the corresponding figure/table in the manuscript.
DOI: 10.17632/3b33wkk3jg
title: Impact of Italian Score for Organ Allocation System on Deceased Donor Liver Transplantation: A Monocentric Competing Risk Time-to-Event Analysis

description: Raw data for the article: Impact of Italian Score for Organ Allocation System on Deceased Donor Liver Transplantation: A Monocentric Competing Risk Time-to-Event Analysis
DOI: 10.17632/sg8crzcrg5
title: Data for: Water extractable organic C and total N: the most sensitive indicator of soil labile C and N pools in response to the prescribed burning in a suburban natural forest of subtropical Australia

description: Raw data
DOI: 10.6084/m9.figshare.28399367.v1
title: Circinaria contorta

description: Morphological variation and genetic diversity of <i>Circinaria contorta</i> (Megasporaceae, Ascomycota), including <i>C. contorta</i> subsp. <i>albida</i> subsp. nov.
DOI: 10.17632/x3v7rb83bg
title: An Mtb-Human Protein-Protein Interaction Map Identifies a Switch Between Host Anti-Viral and Anti-Bacterial Responses, Penn et. al.

description: All raw microscopy images and blots for Penn et al.
DOI: 10.17632/zthjzskvfv
title: CIWP calculation workbooks to calculate the A-factors for different magma compositions

description: The CIWP calculation workbooks in Microsoft Excel format to calculate the A-factors for different magma compositions. It follows the method by Qin et al. Contrib Mineral Petrol 171, 91 (2016). doi:10.1007/s00410-016-1303-3
DOI: 10.17632/7x6csdbbff
title: Risk Factors and Factors Associated With Postpartum Depression in a High-Risk Maternity Clinic in Southern Brazil: A Cross-Sectional Study

description: Data set of our research.
DOI: 10.17632/t8v3mmc5mj
title: Data set__Antidandruf formulation from Aloe vera_ Ocimum sanctum_ and Withania somnifera

description: This research data set contains data related to antidandruf shampoo using extracts from the leaves of Aloe Vera, Ocimum Sanctum, and Withania Somnifera herbs as an advancement of Ethiopian local herbs via formulation. The presented data gives information on the optimal formulation process for making the herbal antidandruff shampoo. Ethanol-extracted oil from Aloe Vera, Ocimum Sanctum, and Withania Somnifera leaves was used to create three different formulations: F1, F2, and F3. The formulated antidandruff shampoo was evaluated interms of its solid content, foamability, viscosity, dirt dispersion, pH, wetting time, and organoleptic properties. Additionally, the data set includes information on the antifungal activity performance of the Antidandruf shampoo against Malassezia furfur, as determined by disc diffusion and colony count tests. The active chemical components of the leaf-extracted oil were also measured using FTIR.
DOI: 10.17632/ymg89yyj4j
title: TreePillars: An end-to-end 3D target recognition algorithm for nursery and orchard spray robot

description: The dataset used in this study includes 1000 frames of point cloud data featuring scenes of osmanthus and cherry blossom trees. The data were collected using a Velodyne 16-line LiDAR during three distinct acquisition periods to capture seasonal variations in tree structure: November 2022, May 2023, and April 2024. This approach was intentionally designed to ensure a comprehensive and diverse dataset, with each period reflecting different stages in the trees’ growth cycle. The initial data collection in November 2022, referenced from Liu et al. (2024b,a), provides a baseline to observe changes in tree characteristics over time.
The trained TreePillars algorithm achieves an mAP of 61.34%, a computation complexity of 7.34 GFLOPs, and a parameter count of 4.24 million, respectively. Compared to PointPillars, the average precision is increased by 10.94%, while the computation complexity and parameters count are reduced by 4.6% and 12.4%, respectively. It has a more accurate recognition effect on sparse and occluded point cloud targets. Experiments on the intelligent robot show that the location relative error for trees, mAP, and average time for single-frame detection of TreePillars are 1.17%, 77.44%, and 19.14ms, respectively. Compared to the improved DBSCAN and lightweight PointNet, the location relative error is reduced by 1.88%, with detection results showing precise bounding boxes for targets, and a detection time shortened by 76.77%. Relative to the VoteNet algorithm, TreePillars reduces the positiong error by 0.7%, improves mAP by 26.33%, and shortens detection time by 98.29%, meeting the requirements of real-time target detection.
DOI: 10.17632/kk53h8pt5v
title: Source data for A generative artificial intelligence approach for antibiotic optimization

description: Source data for paper "A generative artificial intelligence approach for antibiotic optimization"

Folder Heatmaps_of_APEX_predictions_for_intermediate_optimized_variants_all contains the predicted MICs for the template, the endpoint (the final optimized peptide), and the intermediate peptides between the template and the endpoint.

avg_improvement_rate.csv: Bacterial strain-wise average mean MIC improvement rate for each template optimization.

avg_MIC_fold_change.csv: Bacterial strain-wise average MIC log-fold change for each template optimization.
DOI: 10.6084/m9.figshare.12217799.v1
title: Co-assembly of oral metagenomes per individual

description: Metagenomic co-assembly of each individual in Shaiber et al.
DOI: 10.17632/kdd4ngt8ry
title: Data for: Assessing energy efficiency improvements and related energy security and climate benefits in Finland: An ex post multi-sectoral decomposition analysis

description: The dataset is composed of the final energy consumption by sector (industry, passenger transport, freight transport, residential, services, and agriculture) and sub-sector/end-use (e.g., chemical industry, cars, truck and light vehicles, space heating, etc.) of Finland. In addition, data regarding passengers and goods traffic, the number of households, the stock of dwellings permanently occupied, the floor area of dwellings, and CO2 emissions are collected. The primary data source is the Odyssee database. The Odyssee data are complemented with data regarding the value added and energy dependence of Finland taken from the World Bank and Eurostat database, respectively. The data of Finland cover the period from 2005 to 2015.
DOI: 10.17632/w555t9rhmv
title: Drift data of polyethylene-polyaniline composites at different weight fractions (% wt.) and voltages.

description: Polyethylene-Polyaniline (PE-PANI) pellets were prepared at different weight fractions of 20%, 25%, 30% and 35%. In order to assess the drift characteristic, each pellet was loaded to 1.08 MPa for a time span of one hour at multiple Vs. Amplifier output was recorded as shown in the attached script. For plotting the data, open “estimacion_drift.m” using Matlab and run it. It is possible to convert amplifier output to pellet (sensor) current by dividing the amplifier output by the feedback resistor (Rf). In all the tests, Rf was set to 510 ohm.
DOI: 10.6084/m9.figshare.4560862.v1
title: Transcriptome - Nutomonas longa

description: <i>Nutomonas longa</i>'s transcriptome<i> </i>(formerly known as <i>Planomonas carolina)</i><br><br>- Assembly in-home BGI to obtain Unigene (contigs)- ORF prediction using TransDecoder (Trinity plugin) and PfamScan to obtain coding sequences (CDS files) from transcripts (mRNA)- Protein translations are included (pep)<br><strong>Guifré Torruella, Alex de Mendoza, Xavier Grau-Bové, Meritxell Antó, </strong>Mark A. Chaplin<strong>, Javier del Campo, </strong>Laura Eme, Gregorio Pérez-Cordón, Christopher M. Whipps, Krista M. Nichols, Richard Paley, Andrew J. Roger, Ariadna Sitjà-Bobadilla, Stuart Donachie,<strong> and Iñaki Ruiz-Trillo. </strong>(2015)<br><em>Phylogenomics reveals convergent evolution of lifestyles in close relatives of animals and fungi.</em><br><strong><em>Current Biology </em></strong>25(18):2404-10.<br><br>www.multicellgenome.com
DOI: 10.17632/646bdcz7x9
title: Investigation of thermal oxidation ageing and life prediction of nitrile rubber for airplane sealing application

description: this data support the work of "Investigation of thermal oxidation ageing and life prediction of nitrile rubber for airplane sealing application"
DOI: 10.17632/b33mj49whx
title: Clean-study

description: This study hypothesized that the use of a degradable polymer film (WomedLeaf™) following radiofrequency endometrial ablation (EA) could reduce the formation of intrauterine adhesions (IUAs). IUAs are a common complication of EA and may lead to hematometra, post-ablation tubal sterilization syndrome, retrograde bleeding, and diagnostic challenges. While several anti-adhesion barriers have shown efficacy in preventing IUAs after hysteroscopic surgery, their effectiveness following thermal ablation techniques like radiofrequency (RF) remains unknown.

We conducted a multicenter, randomized, controlled, and blinded pilot trial at two Dutch hospitals between December 2022 and December 2023 to address this. Women aged ≥30 years with refractory heavy menstrual bleeding, eligible for EA with the Novasure® RF system, were included. After consent and intraoperative eligibility confirmation, participants were randomized 1:1 to either receive the WomedLeaf™ adhesion barrier film or no barrier. Exclusion criteria included uterine anomalies, prior IUA treatment, malignancies, infections, or known allergies to the film’s components.

The WomedLeaf™ film was inserted immediately following EA using a flexible 5-mm inserter and released intrauterine, unfolding to cover the endometrial surface. The film naturally degrades and is discharged within one week. Ultrasound was used to confirm positioning. All patients received standardized sedation and postoperative analgesia.

The primary outcome was IUA presence and severity, assessed via second-look hysteroscopy 4–6 weeks post-procedure. These were performed outpatient, without anaesthesia, by a blinded observer and recorded for external review. IUAs were categorized using the American Fertility Society (AFS) classification. Endometrial biopsies were obtained during the procedure for histopathological evaluation. After 3 months, participants were contacted by phone to assess bleeding (PBAC), dysmenorrhea (0–5 scale), satisfaction (0–5 scale), and adverse events.

These data provide insight into IUA formation after RF ablation and the potential of a polymer barrier film to reduce adhesion severity. They support future research on optimizing adhesion prevention strategies in endometrial ablation.
DOI: 10.17632/2gp55dvsdj
title: Data for: Monetary Policy Transmission in Systemically Important Economies: Is China Different?

description: Appendix with extra results. Raw data and programs will be made available separately at Pierre Siklos' website.
DOI: 10.17632/z3yfkxvkz5
title: Prediction of Interlayer Strength in Material Extrusion Additive Manufacturing - supplementary data

description: This is the supplementary data for 'Prediction of Interlayer Strength in Material Extrusion Additive Manufacturing' by Tim Coogan and Dave Kazmer. The first tab of data provides the mechanical data for all parts, including the side of the box the part was cut from, the height of break along the narrow section of the gauge length, the extension at break, modulus, peak load, and strength for all specimens. The second tab includes the measured interlayer contact, predicted interlayer contact, in-line pressure, in-line contact pressure, and in-line temperatures measured for every layer of all conditions in this study.
DOI: 10.17632/843xym95y3
title: Procedure and scripts developed for the PyGNOME model simulation of the 2019 Brazilian coast oil spill

description: The Python scripts that were developed for the simulations of the oil spill that aaffected the Brazilian coast in 2019 and beginning of 2020 are presented in this report. The simulations used the PyGNOME model. The scripts prepare the input data, run the Python model and post-process the results of the analysis.
DOI: 10.6084/m9.figshare.19499555.v1
title: patches and local annotations, slide 062, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.6084/m9.figshare.25126571.v1
title: Mosquito occurrence data in the republic of Ireland, 2017-2018

description: A snapshot mosquito field survey was conducted in the Republic of Ireland in April-May 2017 and 2018 (VectorNet project) to provide mosquito distribution data. Morphological identification was completed by genetic analyses to determine species identity of members of the Maculipennis complex and the Pipiens Assemblage. A total of 52 samples, including 50 immature aquatic samplings and 2 adult catches, were collected from 72 locations distributed over 30 of the 34 vice counties across the country. Seventeen mosquito taxa were collected, and here we provide the first records of <i>Aedes geminus,</i> <i>Annopheles daciae</i> and <i>Culex torrentium</i> for Ireland. We also confirm the occurrence of both <i>An. algeriensis</i> and <i>Culiseta alaskaensis</i> which were found earlier in Ireland at single occasions only.
DOI: 10.17632/3t67j7byr8
title: E-CIGARETTE USE ON ACADEMIC OF GEN Z

description: Research questionnaire on electronic cigarettes in the zoomer generation
DOI: 10.17632/bg7xb8pn6p
title: Data for: Retinal layer segmentation in rodent OCT images: Local intensity profiles & fully convolutional neural networks

description: Database of rodent OCTs composed of two batches of images. Animal experiment permission was granted by the Danish Animal Experimentation Council (license number: 2017-15-0201-01213). Rat OCT images were taken with the Micron IV equipment (Phoenix Research Labs, Pleasanton, USA). All rats were anesthetized previously to image acquisition. A set of 22 Sprague-Dawley rats were used. The first batch is composed of 129 OCT images and the second one of 115 images (image size: 1024x1024 pixels; resolution: 0.9775 um/pixel). The most significant retinal layer boundaries that were visibly distinguishable on these images were segmented: ILM (Internal Limiting Membrane), IPL-INL (Inner Plexiform Layer - Inner Nuclear Layer), INL-OPL (Inner Nuclear Layer - Outer Plexiform Layer), OPL-ONL (Outer Plexiform Layer - Outer Nuclear Layer), IS-OS (Inner Segment - Outer Segment), RPE (Retinal Pigment Epithelium). The database contains the original rodent oct images obtained from circular scans, expert-reviewed segmentation (ground truth) and several automatic segmentation results for comparison purposes. This database must be loaded with MATLAB. For more information, see Sandra Morales, Adrián Colomer, José M. Mossi, Rocío del Amor, David Woldbye, Kristian Klemp, Michael Larsen, Valery Naranjo, Retinal layer segmentation in rodent OCT images: Local intensity profiles & fully convolutional neural networks, Computer Methods and Programs in Biomedicine, Volume 198, 2021, 105788, ISSN 0169-2607, https://doi.org/10.1016/j.cmpb.2020.105788.
DOI: 10.17632/4cbf9sxj7x
title: Data for: Predicting Scientific Research Trends Based on Link Prediction in Keyword Networks

description: The provided data contains Journal and Conference articles' keywords co-occurrence network from 2000 to 2017. The data is in GEXF format and contains time stamps for each keyword. Time intervals are on a yearly basis.
DOI: 10.17632/n59hcz4r3n
title: Data for: Morphology change of submerged artificial sandbar and its impacts on beach evolution under erosive wave condition

description: This data was uploaded for supporting findings in the manuscript entitled 'Morphology change of submerged artificial sandbar and its impacts on beach evolution under erosive wave condition' which will be submitted to Marine Geology. The data included beach profile evolution and detailed artificial sandbar morphological changes and berm responses.
DOI: 10.17632/4z4mypck9b
title: Inter-residue distances surrounding the ligand data sets using MANORAA

description: Distances measured between distinctive parts of amino acid residues surrounding the ligand.
DOI: 10.17632/3wyp7msvfd
title: Euglycemia is affected by stress defense factor hepatocyte NRF1, but not NRF2

description: Hepatocyte stress signaling has been established to alter glucose metabolism and impair systemic glucose homeostasis. In contrast, the role of stress defenses in the control of glucose homeostasis is less understood. Nuclear factor erythroid 2 related factor-1 (NRF1) and -2 (NRF2) are transcription factors that promote stress defense and can exert hepatocyte stress defense programming via complementary gene regulation. To identify whether there are independent or complementary roles of these factors in hepatocytes on glucose homeostasis, we investigated the effect of adult-onset, hepatocyte-specific deletion of NRF1, NRF2, or both on glycemia in mice fed 1-3 weeks with a mildly stressful diet enriched with fat, fructose, and cholesterol. Compared to respective control, NRF1 deficiency and combined deficiency reduced glycemia, in some cases resulting in hypoglycemia, whereas there was no effect of NRF2 deficiency. However, reduced glycemia in NRF1 deficiency did not occur in the leptin-deficient mouse model of obesity and diabetes, suggesting hepatocyte NRF1 support defenses that counteract hypoglycemia but does not promote hyperglycemia. Consistent with this, NRF1 deficiency was associated with reduced liver glycogen and glycogen synthase expression as well as marked alteration to circulating level of glycemia-influencing hormones, growth hormone and insulin-like growth factor-1 (IGF1). Overall, we identify a role for hepatocyte NRF1 in modulating glucose homeostasis, which may be linked to liver glycogen storage and the growth hormone / IGF1 axis.
DOI: 10.17632/gccpg29vmg
title: Supplemental Material: A Comparison of Family Physician and Dermatologist Topical Corticosteroid Prescriptions: A Population-Based Cross-Sectional Study

description: Supplemental Material: A Comparison of Family Physician and Dermatologist Topical Corticosteroid Prescriptions: A Population-Based Cross-Sectional Study
DOI: 10.17632/x95z3yj8d3
title: Data for: Macroeconomic impact of the German energy transition and its distribution by sectors and regions

description: Supplementary Information 1: Description of the macroeconomic simulation model ISI-Macro
DOI: 10.17632/zj2fj76zhs
title: HS-SPME optimization by RSM and discrimination analysis for volatile profile of X-ray irradiated mozzarella cheese

description: Headspace Solid-Phase MicroExtraction (HS-SPME) and subsequent analysis by gas chromatography coupled to mass spectrometry (GC-MS), provided a detailed volatolomic profile of X-ray irradiated mozzarella cheese. Response Surface Methodology (RMS), obtained from a Central Composite Design (CCD) was employed to define the optimized combination of extraction temperature (°C), extraction time (min) and sample amount (g). From the analysis of the response surfaces it can be stated that all three parameters equally influenced the extraction efficiency.  The optimal HS-SPME conditions were the highest level for all the factors, i.e., at 50 °C for extraction temperature, 75 min for extraction time and 5 g for sample amount. The optimised HS-SPME were used to analyse a rapresentive number of non-irradiated and irradiated samples at three dose levels, i.e., 1.0, 2.0, 3.0 kGy. Principal Component Analysis (PCA), Partial Least Squares-Discriminant Analysis (PLS-DA) and Linear Discriminant Analysis (LDA) were applied to explore the variation of volatile profile with respect to the X-ray irradiation treatment.
DOI: 10.17632/6nvcj4s2v4
title: UAS-based Real-Time Water Quality Monitoring, Sampling, and Visualization Platform (UASWQP)

description: Urbanization, land use change, and agricultural activities continue to affect water quality standards at the urban-rural interface, such as the Boise River System located in Idaho, USA. This project demonstrates how the off-the-shelf unmanned aircraft system (UAS, also known as drone) equipped with other necessary hardware attachments can be used to monitor real-time water quality components, including pH, water temperature, electric conductivity (EC), and dissolved oxygen at open waterbodies. The proposed UAS-based hardware platform for water quality studies (UASWQP) appears a promising tool to advance environmental research activities, especially for impaired waterways (e.g., rivers, lakes, and reservoirs). The preliminary result shows that the proposed UASWQP effectively displays water quality components in real-time to the ThingSpeak Cloud web services, while an adequate water sample was also collected easily for further analysis at laboratory facilities, when needed. It is anticipated that UASWQP will be a useful tool to promote environmental stewardship by contributing to the water research communities in years to come.
DOI: 10.6084/m9.figshare.28719581.v1
title: Supplemental Materials.pdf

description: Supplemental Material
DOI: 10.17632/fcgnjpc2jw
title: Bio-diesel dataset

description: This data is used for the estimation of the biodiesel equilibrium market conditions using stata and ardl using eviews
DOI: 10.17632/h6y5gs9hs6
title: Effect of D-cycloserine on brain connectivity

description: 3 time point study of D-cycloserine's effect on brain connectivity for patients with COPD over a course of pulmonary rehabilitation. Baseline, during pulmonary rehabilitation and after 4 doses of drug/placebo and following the completion of the course. Diffusion weighted imaging collected for 5 regions of interest.
DOI: 10.17632/dz494252xc
title: Data for: Crowd-sourced identification of the beach-dune interface

description: Dune toe selections for all research backgrounds, image types, and locations.
DOI: 10.17632/skj4999wr6
title: Program Moment of inertia

description: The program calculates the moments of inertia of the molecules Ix, Iy and Iz relative to the x, y and z axes (the axis of rotation with the minimum moment of inertia is taken as the x axis, the y and z axes are perpendicular to it and to each other). The coordinates for the atoms from the XYZ file are used as data for the calculation.
DOI: 10.17632/cbym43k8b9
title: Tenango dam database

description: database of environmental variables of the Tenango dam during 2015.
DOI: 10.17632/tkvh83td45
title: Data for: TiO2/halide perovskite interface: the impact of surface state passivation on energy alignment and photovoltaic performance of perovskite solar cells

description: Supplementary information TiO2/halide perovskite interface: the impact of surface state passivation on energy alignment and photovoltaic performance of perovskite solar cells
DOI: 10.17632/56zh5g7bfw
title: Detection of continuous hierarchical heterogeneity by single-cell surface antigen analysis in the prognosis evaluation of acute myeloid leukaemia

description: In this study, we provided a CyTOF analysis pipeline to find out the AML heterogeneity dynamics along the pseudotime. Minute differences in temporal traits among samples could be exhibited on a trajectory, thus providing a new strategy for predicting AML relapse and monitoring drug responses over time scale. Here are mass cytometry datasets without pre-processing.