cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.19426985.v1
title: dbnsfp_ps1_plp.csv

description: A table of ClinVar-dbNSFP variant pairs with PS1 evidence, where one variant is classified as P/LP (p, lp, or p/lp) and the other is unclassified (not in ClinVar). All ClinVar columns are included, and documentation for additional columns can be found in "Non-ClinVar Column Descriptions". Select dbNSFP columns are included, and documentation for these can be found in "dbNSFP Column Descriptions". The columns of ClinVar variants are preceded by "cv_" and those of dbNSFP variants are preceded by "db_". Missing data is marked with "-".
DOI: 10.3886/e174361
title: ICPSR Bibliography Citation Network (February 2022)

description: To study research data reuse, we constructed a citation network from publications in the Interuniversity Consortium for Political and Social Research (ICPSR) Bibliography of Data-Related Literature. The ICPSR Bibliography contains links between 8,071 studies, which consist of one or more data files and metadata, and 101,674 citing publications. This snapshot of the ICPSR Bibliography includes materials published between 1962 - 2022.
DOI: 10.3886/e174361v1
title: ICPSR Bibliography Citation Network (February 2022)

description: To study research data reuse, we constructed a citation network from publications in the Interuniversity Consortium for Political and Social Research (ICPSR) Bibliography of Data-Related Literature. The ICPSR Bibliography contains links between 8,071 studies, which consist of one or more data files and metadata, and 101,674 citing publications. This snapshot of the ICPSR Bibliography includes materials published between 1962 - 2022.
DOI: 10.18112/openneuro.ds002994.v1.0.2
title: fribblesFMRI_object-value-construction
DOI: 10.6084/m9.figshare.19427021
title: clinvar_pvs1.csv

description: A table of ClinVar variants with PVS1 evidence. All ClinVar columns are included, and documentation for additional columns can be found in "Non-ClinVar Column Descriptions". Missing data is marked with "-".
DOI: 10.6084/m9.figshare.19427021.v1
title: clinvar_pvs1.csv

description: A table of ClinVar variants with PVS1 evidence. All ClinVar columns are included, and documentation for additional columns can be found in "Non-ClinVar Column Descriptions". Missing data is marked with "-".
DOI: 10.6084/m9.figshare.19426988
title: dbnsfp_ps1_blb.csv

description: A table of ClinVar-dbNSFP variant pairs with PS1 evidence, where one variant is classified as B/LB (b, lb, or b/lb) and the other is unclassified (not in ClinVar). All ClinVar columns are included, and documentation for additional columns can be found in "Non-ClinVar Column Descriptions". Select dbNSFP columns are included, and documentation for these can be found in "dbNSFP Column Descriptions". The columns of ClinVar variants are preceded by "cv_" and those of dbNSFP variants are preceded by "db_". Missing data is marked with "-". <br> <em>Note:</em> This list is based on a criteria analogous to PS1 for the benign classification, although this is not an ACMG/AMP evidence tier.
DOI: 10.6084/m9.figshare.19426988.v1
title: dbnsfp_ps1_blb.csv

description: A table of ClinVar-dbNSFP variant pairs with PS1 evidence, where one variant is classified as B/LB (b, lb, or b/lb) and the other is unclassified (not in ClinVar). All ClinVar columns are included, and documentation for additional columns can be found in "Non-ClinVar Column Descriptions". Select dbNSFP columns are included, and documentation for these can be found in "dbNSFP Column Descriptions". The columns of ClinVar variants are preceded by "cv_" and those of dbNSFP variants are preceded by "db_". Missing data is marked with "-". <br> <em>Note:</em> This list is based on a criteria analogous to PS1 for the benign classification, although this is not an ACMG/AMP evidence tier.
DOI: 10.6084/m9.figshare.19426973
title: clinvar_ps1_blb.csv

description: A table of ClinVar variant pairs with PS1 evidence, where one variant is classified as B/LB (b, lb, or b/lb) and the other is classified as VUS (uncertain, conflicting, not provided). All ClinVar columns are included, and documentation for additional columns can be found in "Non-ClinVar Column Descriptions". The columns of B/LB variants are preceded by "blb_" and those of VUS variants are preceded by "vus_". Missing data is marked with "-".<br> <em>Note:</em> This list is based on a criteria analogous to PS1 for the benign classification, although this is not an ACMG/AMP evidence tier.
DOI: 10.6084/m9.figshare.19427024
title: dbnsfp_pvs1.csv

description: A table of dbNSFP variants with PVS1 evidence. Select dbNSFP columns are included, and documentation for these can be found in "dbNSFP Column Descriptions". Missing data is marked with "-".
DOI: 10.5281/zenodo.6678394
title: WRF simulation of atmospheric velocity components around flight 08 of the SOUTHTRAC Campaign

description: The three atmospheric velocity components (zonal u, meridional v, vertical w) from numerical model WRF every 15 min and at 0.5 / 3 km vertical / horizontal resolution up to 60 km height are included. The whole time and geographical area of the flight are covered. Zipped netcdf format.
DOI: 10.6084/m9.figshare.20231670.v1
title: forTKCGAN

description: for academic
DOI: 10.6084/m9.figshare.20231670
title: forTKCGAN

description: for academic
DOI: 10.5281/zenodo.6799173
title: Adaptation of pathogens to their local plant host, Silphium integrifolium, along a precipitation gradient

description: All figures and code were generated in RStudio 2022.02.3+492 "Prairie Trillium" Release. All packages needed to run the R code are shown in the RMD’s. Code to generate figures and statistical analysis: DVTindex_help.Rmd Code to generate figure 3 Figure5_PrairieVSCommonGarden Code to generate figure 5 PATHOFigs_for_Manu_FEB22.Rmd Code to generate figures 1, 2, 4 SUPP_Figure3_DimPathoEDIT.Rmd Code to generate supplementary figure 3 (fig S3) STATSAnalysis_PathoDim2B.Rmd Code to generate all tables and statistical analysis in the manuscript Description of data files: 2019and2020Prairie_data.txt This file contains data collected from the prairie sites in 2019 and 2020 Dim2b_latlon.csv The latitudinal and longitudinal coordinates for the common garden sites and prairie sites as well as precipitation data DVTINDEX_from_DVT.csv A separate file that contains the data that produced fig 3. This data file is sourced from SEPT2019_2020_COMPILED_2b_DATACOLL.txt SEPT2019_2020_COMPILED_2b_DATACOLL.txt SEPT2019_2020_COMPILED_2b_DATACOLL_plots.txt SEPT2019_2020_COMPILED_2b_DATACOLL_plots_longversion.txt These 3 data files are different versions of the same raw data that was collected from the common garden sites in 2019 and 2020. The code calls for all 3 at different points to generate plots and run statistical analyses Summary [ insert unique name here] Various data frames generated from r mark downs that contain summary statistics of the data. These are used to produce the figures in PATHOFigs_for_Manu_FEB22.Rmd graphs.
DOI: 10.5281/zenodo.6799172
title: Adaptation of pathogens to their local plant host, Silphium integrifolium, along a precipitation gradient

description: All figures and code were generated in RStudio 2022.02.3+492 "Prairie Trillium" Release. All packages needed to run the R code are shown in the RMD’s. Code to generate figures and statistical analysis: DVTindex_help.Rmd Code to generate figure 3 Figure5_PrairieVSCommonGarden Code to generate figure 5 PATHOFigs_for_Manu_FEB22.Rmd Code to generate figures 1, 2, 4 SUPP_Figure3_DimPathoEDIT.Rmd Code to generate supplementary figure 3 (fig S3) STATSAnalysis_PathoDim2B.Rmd Code to generate all tables and statistical analysis in the manuscript Description of data files: 2019and2020Prairie_data.txt This file contains data collected from the prairie sites in 2019 and 2020 Dim2b_latlon.csv The latitudinal and longitudinal coordinates for the common garden sites and prairie sites as well as precipitation data DVTINDEX_from_DVT.csv A separate file that contains the data that produced fig 3. This data file is sourced from SEPT2019_2020_COMPILED_2b_DATACOLL.txt SEPT2019_2020_COMPILED_2b_DATACOLL.txt SEPT2019_2020_COMPILED_2b_DATACOLL_plots.txt SEPT2019_2020_COMPILED_2b_DATACOLL_plots_longversion.txt These 3 data files are different versions of the same raw data that was collected from the common garden sites in 2019 and 2020. The code calls for all 3 at different points to generate plots and run statistical analyses Summary [ insert unique name here] Various data frames generated from r mark downs that contain summary statistics of the data. These are used to produce the figures in PATHOFigs_for_Manu_FEB22.Rmd graphs.
DOI: 10.6084/m9.figshare.20231370
title: Polyp-canal reconstruction reveals evolution towards complexity in corals (Dataset Part 151)

description: There are 17 files in this dataset. This is the 151st part of this dataset. The <em>A. millepora</em>, <em>A. muricata</em>,<em> C. vaughani</em>,<em> M. capricornis</em>, <em>M. foliosa</em>,<em> P. damicornis</em>, <em>P. meandrina</em>,<em> P. verrucosa</em>, and<em> S. pistillata</em> samples were collected from the Xisha Islands (2018); the <em>A. digitifera</em>, <em>F. speciosa </em>(2008), and<em> M. turgescens</em> (2017) samples were collected from the Nansha Islands; the <em>P. lutea</em> samples were collected from the Weizhou Islands (2017); the <em>G. fascicularis</em>, and<em> M. stellata </em>samples were collected from the Gaven Reef (2017); the <em>A. myriophthalma</em> samples were collected from the Reed Tablemount (2017); the <em>P. sinensis</em> samples were collected from the Subi Reef (2017). All samples, which occurred in large arborescent colonies forming thickets, were found in tropical shallow reefs of the marine neritic zone, from depths of about 5 to 10 m. The daily mean temperature was between 23.2 and 29.2°C. The coral samples were kept whole and housed in our laboratory coral tank, where all conditions were simulated to reflect those of their habitat in the South China Sea. These samples were kept in the tank for about one to three months before HRCT analysis.
DOI: 10.6084/m9.figshare.20231370.v1
title: Polyp-canal reconstruction reveals evolution towards complexity in corals (Dataset Part 151)

description: There are 17 files in this dataset. This is the 151st part of this dataset. The <em>A. millepora</em>, <em>A. muricata</em>,<em> C. vaughani</em>,<em> M. capricornis</em>, <em>M. foliosa</em>,<em> P. damicornis</em>, <em>P. meandrina</em>,<em> P. verrucosa</em>, and<em> S. pistillata</em> samples were collected from the Xisha Islands (2018); the <em>A. digitifera</em>, <em>F. speciosa </em>(2008), and<em> M. turgescens</em> (2017) samples were collected from the Nansha Islands; the <em>P. lutea</em> samples were collected from the Weizhou Islands (2017); the <em>G. fascicularis</em>, and<em> M. stellata </em>samples were collected from the Gaven Reef (2017); the <em>A. myriophthalma</em> samples were collected from the Reed Tablemount (2017); the <em>P. sinensis</em> samples were collected from the Subi Reef (2017). All samples, which occurred in large arborescent colonies forming thickets, were found in tropical shallow reefs of the marine neritic zone, from depths of about 5 to 10 m. The daily mean temperature was between 23.2 and 29.2°C. The coral samples were kept whole and housed in our laboratory coral tank, where all conditions were simulated to reflect those of their habitat in the South China Sea. These samples were kept in the tank for about one to three months before HRCT analysis.
DOI: 10.6084/m9.figshare.20231685
title: TKCGANrelated

description: for academic
DOI: 10.15139/s3/fwivmd
title: Time-averaged atmospheric and land output from the idealized GFDL AM2.1 climate model experiments

description: Time-averaged atmospheric and land output from the idealized GFDL AM2.1 climate model experiments described in Scheff and Frierson (2022, submitted to Climate Dynamics), along with descriptive README text file
DOI: 10.5517/ccdc.csd.cc29233m
title: CCDC 2117179: Experimental Crystal Structure Determination

description: Related Article: Shiyong Chen|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bfh8k
title: CCDC 2157918: Experimental Crystal Structure Determination

description: Related Article: Juha Koivukorpi, Harri Sopo, Reijo Sillanpää|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bfhq0
title: CCDC 2157932: Experimental Crystal Structure Determination

description: Related Article: Ran Gao|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bfkw7
title: CCDC 2157999: Experimental Crystal Structure Determination

description: Related Article: Paul Saines|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bfkx8
title: CCDC 2158000: Experimental Crystal Structure Determination

description: Related Article: Paul Saines|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bflbq
title: CCDC 2158013: Experimental Crystal Structure Determination

description: Related Article: Thierry Maris|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bfqr8
title: CCDC 2158150: Experimental Crystal Structure Determination

description: Related Article: Brendan J. Graziano|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bfr5q
title: CCDC 2158163: Experimental Crystal Structure Determination

description: Related Article: Hari Prasad Kokatla|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2bfs8v
title: CCDC 2158197: Experimental Crystal Structure Determination

description: Related Article: Satish Kumar Patel|2022|CSD Communication|||
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5281/zenodo.6701414
title: WRF simulation of atmospheric pressure and temperature around flight 08 of the SOUTHTRAC Campaign

description: Atmospheric pressure (p) and temperature (T) from numerical model WRF every 15 min and at 0.5 / 3 km vertical / horizontal resolution up to 60 km height are included. The whole time and geographical area of the flight are covered. Zipped netcdf format.
DOI: 10.5281/zenodo.6701413
title: WRF simulation of atmospheric pressure and temperature around flight 08 of the SOUTHTRAC Campaign

description: Atmospheric pressure (p) and temperature (T) from numerical model WRF every 15 min and at 0.5 / 3 km vertical / horizontal resolution up to 60 km height are included. The whole time and geographical area of the flight are covered. Zipped netcdf format.
DOI: 10.34740/kaggle/dsv/3906495
title: Team Fight Tactics matches
DOI: 10.6084/m9.figshare.20231766
title: Testing Adaptive Peaks Hypothesis 2022 Kinsey.xlsx

description: Includes xenopus laevis locomotor performance, morphology, behavior, and survival
DOI: 10.6084/m9.figshare.20231766.v1
title: Testing Adaptive Peaks Hypothesis 2022 Kinsey.xlsx

description: Includes xenopus laevis locomotor performance, morphology, behavior, and survival
DOI: 10.23636/42sd-zz44
title: British Library Covid-19 Testimony Projects Database

description: Database of testimony projects in the UK that collected material during the Covid-19 pandemic, compiled by the British Library's Oral History team. The database can be downloaded as a spreadsheet and is an open resource for further research and re-use.
DOI: 10.34740/kaggle/dsv/3906339
title: TELEVISION DATASET 2022
DOI: 10.35077/wag
title: 191007_JH_HK0228_Tle4LSLflp_MOs_M2ALM_female

description: An essential step toward a comprehensive understanding of brain function is to establish a cellular-resolution structural framework upon which multiscale and multi-modal information spanning molecules, cells, circuits, systems and behavior can be registered, integrated, interpreted and mined. Dr. Huang and Arlotta will lead the Center to produce two complementary cell atlases integrated within a digital Common Coordinate Framework of the mouse brain: 1) a Brainwide Cell Transcriptome Atlas of unprecedented scale and resolution, integrated with 2) an in-depth Forebrain Projection Neuron Atlas that combines comprehensive anatomic and molecular information.
description: DATASET METADATA: title:'191007_JH_HK0228_Tle4LSLflp_MOs_M2ALM_female', GeneralModality:'connectivity', Technique:'anterograde tracing' SPECIMEN METADATA: LocalID:'191007_JH_HK0228_Tle4LSLflp_MOs_M2ALM_female_processed', Species:'mouse', NCBITaxonomy:'NCBI:txid10090', Age:'8', Ageunit:'Weeks', Sex:'Female', OrganName:'Brain', Locations:'MOs' INSTRUMENT METADATA: MicroscopeType:'Two Photon', MicroscopeManufacturerAndModel:'TissueVision' IMAGE METADATA: yAxis:'right-to-left', zAxis:'anterior-to-posterior', Number:'1,2,red,green', displayColor:'(1.0, 0.0, 0.0),(0.0, 1.0, 0.0)', stepSizeX:'1 micron/pixel', stepSizeY:'1 micron/pixel', stepSizeZ:'50 micron/pixel'
DOI: 10.35077/war
title: fMOST_cells_182280

description: This dataset comes from combining genetic labeling with fMOST to achieve a genetically targeted single neuron saturation screen of major classes of cortical projection neurons in the sensorimotor system.
description: Imaging: TDI; Virus: AAV
description: DATASET METADATA: title:'fMOST_cells_182280', GeneralModality:'cell morphology', Technique:'fMOST; neuron morphology reconstruction' SPECIMEN METADATA: LocalID:'182280', Species:'mouse', NCBITaxonomy:'NCBI:txid10090', Age:'16', Ageunit:'Weeks', Sex:'Male', Genotype:'C57BL/7J', OrganName:'Brain', Locations:'MOp' INSTRUMENT METADATA: MicroscopeType:'fMOST' IMAGE METADATA: yAxis:'inferior-to-superior', zAxis:'anterior-to-posterior', Number:'1, gray', displayColor:'(0.8, 0.8, 0.8)', stepSizeX:'0.35 micron/pixel', stepSizeY:'0.35 micron/pixel', stepSizeZ:'1 micron/pixel'
DOI: 10.35077/was
title: fMOST_cells_182444

description: This dataset comes from combining genetic labeling with fMOST to achieve a genetically targeted single neuron saturation screen of major classes of cortical projection neurons in the sensorimotor system.
description: Imaging: TDI; Virus: AAV
description: DATASET METADATA: title:'fMOST_cells_182444', GeneralModality:'cell morphology', Technique:'fMOST; neuron morphology reconstruction' SPECIMEN METADATA: LocalID:'182444', Species:'mouse', NCBITaxonomy:'NCBI:txid10090', Age:'14', Ageunit:'Weeks', Sex:'Female', Genotype:'PlexinD1-creER', OrganName:'Brain', Locations:'Mop' INSTRUMENT METADATA: MicroscopeType:'fMOST' IMAGE METADATA: yAxis:'inferior-to-superior', zAxis:'anterior-to-posterior', Number:'1, gray', displayColor:'(0.8, 0.8, 0.8)', stepSizeX:'0.35 micron/pixel', stepSizeY:'0.35 micron/pixel', stepSizeZ:'1 micron/pixel'
DOI: 10.35077/wax
title: fMOST_cells_182448

description: This dataset comes from combining genetic labeling with fMOST to achieve a genetically targeted single neuron saturation screen of major classes of cortical projection neurons in the sensorimotor system.
description: Imaging: TDI; Virus: AAV
description: DATASET METADATA: title:'fMOST_cells_182448', GeneralModality:'cell morphology', Technique:'fMOST; neuron morphology reconstruction' SPECIMEN METADATA: LocalID:'182448', Species:'mouse', NCBITaxonomy:'NCBI:txid10090', Age:'14', Ageunit:'Weeks', Sex:'Female', Genotype:'PlexinD1-creER', OrganName:'Brain', Locations:'Mop' INSTRUMENT METADATA: MicroscopeType:'fMOST' IMAGE METADATA: yAxis:'inferior-to-superior', zAxis:'anterior-to-posterior', Number:'1, gray', displayColor:'(0.8, 0.8, 0.8)', stepSizeX:'0.35 micron/pixel', stepSizeY:'0.35 micron/pixel', stepSizeZ:'1 micron/pixel'
DOI: 10.35077/web
title: fMOST_cells_182681

description: This dataset comes from combining genetic labeling with fMOST to achieve a genetically targeted single neuron saturation screen of major classes of cortical projection neurons in the sensorimotor system.
description: Imaging: TDI; Virus: AAV
description: DATASET METADATA: title:'fMOST_cells_182681', GeneralModality:'cell morphology', Technique:'fMOST; neuron morphology reconstruction' SPECIMEN METADATA: LocalID:'182681', Species:'mouse', NCBITaxonomy:'NCBI:txid10090', Age:'13', Ageunit:'Weeks', Sex:'Male', Genotype:'FEZF2-CreER*lsl-flp', OrganName:'Brain', Locations:'Mop' INSTRUMENT METADATA: MicroscopeType:'fMOST' IMAGE METADATA: yAxis:'inferior-to-superior', zAxis:'anterior-to-posterior', Number:'1, gray', displayColor:'(0.8, 0.8, 0.8)', stepSizeX:'0.35 micron/pixel', stepSizeY:'0.35 micron/pixel', stepSizeZ:'1 micron/pixel'