cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.24416/uu01-rf2v6x
title: Reduction of antimicrobial use on farms by targeting critical success factors in farm management

description: The use of antimicrobials in the pig sector in the Netherlands has been reduced with more than 72% over the last decade. However, there is still a considerable number of pig farms that have not been able to lower their antimicrobial usage (AMU) to a sufficiently low level, comparable to the majority of the other pig farms. Therefore, an intervention study was initiated to lower the antimicrobial use in which 45 pig farms with high AMU were recruited. These farms were coached over a period of two years whereby different management interventions were introduced.
DOI: 10.24416/uu01-e8z2lq
title: The cerebellum during provocation and aggressive behaviour: A 7T fMRI study

description: Data and code used for the paper "The cerebellum during provocation and aggressive behaviour: A 7T fMRI study" in Imaging Neuroscience. Doi: https://doi.org/10.1162/imag_a_00044 
This includes defaced T1w scans, two fMRI runs per participant, task logs, questionnaire output and the code for the preprocessing and analyses of the data.
DOI: 10.24416/uu01-rm2oyu
title: PCR-GLOBWB experiment 1-0 output - 4dHydro working package 5 [UPDATED]

description: 4dHydro working package 5 is dedicated to provided a set of land-surface and hydrological model community outputs for several calibration/assimilation experiments. These experiments include simulations over different resolutions and calibration/assimilation with earth-observed (EO) satellite products. The aim of these experiments is to investigate the added value of EO products for hydrological simulations. This data package contains the outputs for the PCR-GLOBWB hydrological model (globalhydrology.nl/research/models/pcr-globwb-2-0), which was developed at Utrecht University. See https://opensciencedata.4dhydro.eu/ for links to outputs from other models. Outputs are formatted according to the 4dHydro working package 5 storage protocol. For more information, please contact Bram Droppers (b.droppers@uu.nl) or Niko Wanders (n.wanders@uu.nl).

A new version of this dataset was released, which can be found here; https://public.yoda.uu.nl/geo/UU01/8BVQCA.html
DOI: 10.24416/uu01-ufu2kd
title: 4 PIC CESM data for Baatsen et al. 2020

description: Averages and climatologies of primary atmosphere and ocean data from the CESM1.0.5 simulation with 38Ma paleomag reconstruction and 4xPIC (pre-industrial carbon; 1120ppm CO2 / 2684ppb CH4)

This datapackage belongs to the Baatsen et al 2020 paper. There are two more datapackages:

- Pre Industrial CESM data for Baatsen et al. 2020
- 2PIC CESM data for Baatsen et al. 2020

that also belong to this paper. In fact there are three DOI's belonging to the paper which is a bit unhandy so we later created a new datapackage containing the same CESM data of all three simulations. This way we can refer to the paper with only one DOI, this new datapackage has DOI: 10.24416/UU01-KCSGFG
DOI: 10.24416/uu01-b35kd0
title: Functional cerebello–cortico–limbic connectivity in aggression: A resting-state 7T fMRI  study in healthy volunteers

description: Data and code used for the paper "Functional cerebello–cortico–limbic connectivity in aggression: A resting-state 7T fMRI  study in healthy volunteers", published in Imaging Neuroscience. 
Doi: https://doi.org/10.1162/IMAG.a.42.
This includes defaced T1w scans, one resting-state fMRI runs per participant, questionnaire output and the code for the preprocessing and analyses of the data.
DOI: 10.5285/c8d5a7a4-e19b-497f-b7ae-56f9a2b15a56
title: Breeding success of Gentoo penguins at Bird Island, South Georgia, from 1982 to 2020 - VERSION 1.0

description: The breeding success (calculated from nest and chick counts) of Gentoo penguins is monitored annually at Bird Island, South Georgia. The number of incubating nests and chicks reaching fledging stage are counted in several Gentoo penguin colonies. Data exist from 1982 onwards.

***** PLEASE BE ADVISED TO USE VERSION 2.0 DATA ***** 

The VERSION 2.0 data set (see 'Related Data Set Metadata' link below) has been extended with five additional years of data. No changes have been made to the data included in VERSION 1.0.

This work was funded by Natural Environment Research Council (UK) core funding to the British Antarctic Survey.
description: Breeding counts are made 7 days after 75% of monitored marked nests in Square Pond and Johnson colonies have laid at least one egg. All occupied nests i.e. those with eggs are counted at Johnson and Square Pond on the appropriate day. All nests are checked and all those containing eggs tallied at each colony. Counts are done at Natural Arch and Mountain Cwm within one day of the Johnson Counts. Separate counts are recorded for the Upper and Lower colonies at Natural Arch and Mountain Cwm. Counts are done 3 times until the numbers are similar (within around 5%), or if two people are counting, then until the two counts are within around 5%. 

Chicks are counted at all the above colonies 98 days after peak laying (when 75% of monitored nests have laid eggs). Separate counts are made for the Upper and Lower colonies at Natural Arch and Mountain Cwm. Counts are made on the appropriate dates according to the dates used for the breeding counts. Counts at Natural Arch and Mountain Cwm are made within one day of the Johnson counts as for the breeding counts. Counts are done 3 times until numbers are similar (within around 5%)

All data were collected under permit from the Government of South Georgia and the South Sandwich Islands.

All sampling procedures used were regulated by the British Antarctic Survey Ethical Review Committee in collaboration with Cambridge University and the UK Home Office.
DOI: 10.24416/uu01-8bvqca
title: PCR-GLOBWB experiment 1-0 output - 4dHydro working package 5

description: 4dHydro working package 5 is dedicated to provided a set of land-surface and hydrological model community outputs for several calibration/assimilation experiments. These experiments include simulations over different resolutions and calibration/assimilation with earth-observed (EO) satellite products. The aim of these experiments is to investigate the added value of EO products for hydrological simulations. This data package contains the outputs for the PCR-GLOBWB hydrological model (globalhydrology.nl/research/models/pcr-globwb-2-0), which was developed at Utrecht University. See https://opensciencedata.4dhydro.eu/ for links to outputs from other models. Outputs are formatted according to the 4dHydro working package 5 storage protocol. For more information, please contact Bram Droppers (b.droppers@uu.nl) or Niko Wanders (n.wanders@uu.nl).
DOI: 10.24416/uu01-9nfekh
title: POP data for Nooteboom et al., 2022

description: Model output of eddying POP simulations with bathymetry from 38Ma paleomag reconstruction, both the simulations with 2 and 4 times atmospheric CO2 concentrations.
DOI: 10.24416/uu01-1s2yi8
title: Gezond thuiswerken (working from home healthily)

description: The research project Gezond thuiswerken (working from home healthily) of Utrecht University aimed to study the health and well-being of Dutch employees that worked from home during the covid-19 pandemic. To stop the spread of infections, the Dutch government advised employees to work from home as much as possible during the data collection period (March-July 2021). As a result, many employees worked from home for the majority of their working hours, while before March 2020 only a small group of employees worked from home and for a limited number of hours. For many employees, the switch to working from home was large, and this research project tried to gain more insight into how employees experienced this new situation.
A second important aim of the project was to study in which ways employers can stimulate the health and well-being of their employees when these work from home. Many organisations offer worksite health promotion activities, but these are mostly connected to the workplace. When employees work from home, they cannot participate in these activities, so that both employees and employers cannot benefit from the alleged positive effects worksite health promotion has. The research project Working from home healthily therefore also studied which activities employees would be willing to participate in when working from home, and which factors influence this willingness, by using a survey experiment.
DOI: 10.24416/uu01-0lens1
title: PCR-GLOBWB experiment 1-0 output - 4dHydro working package 5

description: 4dHydro working package 5 is dedicated to provided a set of land-surface and hydrological model community outputs for several calibration/assimilation experiments. These experiments include simulations over different resolutions and calibration/assimilation with earth-observed (EO) satellite products. The aim of these experiments is to investigate the added value of EO products for hydrological simulations. This data package contains the outputs for the PCR-GLOBWB hydrological model (globalhydrology.nl/research/models/pcr-globwb-2-0), which was developed at Utrecht University. See https://opensciencedata.4dhydro.eu/ for links to outputs from other models. Outputs are formatted according to the 4dHydro working package 5 storage protocol. For more information, please contact Bram Droppers (b.droppers@uu.nl) or Niko Wanders (n.wanders@uu.nl).
DOI: 10.24416/uu01-cikj8w
title: Gezond thuiswerken (working from home healthily)

description: The research project Gezond thuiswerken (working from home healthily) of Utrecht University aimed to study the health and well-being of Dutch employees that worked from home during the covid-19 pandemic. To stop the spread of infections, the Dutch government advised employees to work from home as much as possible during the data collection period (March-July 2021). As a result, many employees worked from home for the majority of their working hours, while before March 2020 only a small group of employees worked from home and for a limited number of hours. For many employees, the switch to working from home was large, and this research project tried to gain more insight into how employees experienced this new situation.
A second important aim of the project was to study in which ways employers can stimulate the health and well-being of their employees when these work from home. Many organisations offer worksite health promotion activities, but these are mostly connected to the workplace. When employees work from home, they cannot participate in these activities, so that both employees and employers cannot benefit from the alleged positive effects worksite health promotion has. The research project Working from home healthily therefore also studied which activities employees would be willing to participate in when working from home, and which factors influence this willingness, by using a survey experiment.
DOI: 10.24416/uu01-kcsgfg
title: CESM data for Baatsen et al. 2020

description: Averages and climatologies of primary atmosphere and ocean data from the CESM1.0.5 simulations:

-  with 38Ma paleomag reconstruction and 2xPIC (pre-industrial carbon; 560ppm CO2 / 1342ppb CH4)
-  with 38Ma paleomag reconstruction and 4xPIC (pre-industrial carbon; 1120ppm CO2 / 2684ppb CH4)
-  pre-industrial reference (280ppm CO2 / 671ppb CH4)

This is a new and better version of an earlier addition of the CESM data that was used for the Baatsen et al. 2020 paper. The CESM data is the same ofcourse but in that first addition we generated three DOI's, a separate one for each simulation. In this version we have just one DOI for the paper. Within the metadata of this datapackage there is a reference to the previous three DOI's.
DOI: 10.24416/uu01-kvu0sz
title: PCR-GLOBWB output - 4dHydro working package 5

description: 4dHydro working package 5 is dedicated to provided a set of land-surface and hydrological model community outputs for several calibration/assimilation experiments. These experiments include simulations over different resolutions and calibration/assimilation with earth-observed (EO) satellite products. The aim of these experiments is to investigate the added value of EO products for hydrological simulations. This data package contains the outputs for the PCR-GLOBWB hydrological model (globalhydrology.nl/research/models/pcr-globwb-2-0), which was developed at Utrecht University. See https://opensciencedata.4dhydro.eu/ for links to outputs from other models. Outputs are formatted according to the 4dHydro working package 5 storage protocol. For more information, please contact Bram Droppers (b.droppers@uu.nl) or Niko Wanders (n.wanders@uu.nl).
DOI: 10.24416/uu01-o29wtp
title: Multisensory_Container

description: This data package contains data from 3 experiments in which participants estimated the content of containers.
DOI: 10.24416/uu01-ofvas0
title: Child development and the role of visual experience in the use of spatial and non- spatial features in haptic object perception

description: Data belonging to the paper "Child development and the role of visual experience in the use of spatial and non- spatial features in haptic object perception" published in Journal of Experimental Child Psychology.
DOI: 10.24416/uu01-hfg4wd
title: PCR-GLOBWB output - 4dHydro working package 5

description: 4dHydro working package 5 is dedicated to provided a set of land-surface and hydrological model community outputs for several calibration/assimilation experiments. These experiments include simulations over different resolutions and calibration/assimilation with earth-observed (EO) satellite products. The aim of these experiments is to investigate the added value of EO products for hydrological simulations. This data package contains the outputs for the PCR-GLOBWB hydrological model (globalhydrology.nl/research/models/pcr-globwb-2-0), which was developed at Utrecht University. See https://opensciencedata.4dhydro.eu/ for links to outputs from other models. Outputs are formatted according to the 4dHydro working package 5 storage protocol. For more information, please contact Bram Droppers (b.droppers@uu.nl) or Niko Wanders (n.wanders@uu.nl).
DOI: 10.24416/uu01-a0vmkz
title: CESM simulations Eocene monsoons

description: Post-processed CESM output of the simulations used for the results of the 2023 paper in Climate of the Past: 'Resilient Antarctic monsoonal climate prevented ice growth during the Eocene'
Each subfolder contains average and climatology fields of selected atmospheric variables, based on the last 100 years of the respective simulation. Oceanic fields are also provided for the 3 core simulations: 38Ma 4xPIC, 38Ma 2xPIC, Pre-ind ref.
Check the 'Simulations overview' for a list, naming convention, and basic information of the simulations.
DOI: 10.24416/uu01-ydfula
title: Supporting datasets for Response of Late-Eocene warmth to incipient glaciation on Antarctica by Dennis H.A. Vermeulen et al.

description: 100 year average, monthly climatologies of 4 relevant CESM simulations containing selected variables for this work.
A detailed description of the simulations, variables and coorcinates is available in the simlations_overview file.
DOI: 10.24416/uu01-ji2w1e
title: Data for "Longing for touch and CT-optimal touch perception after interpersonal trauma"

description: This repository contains the data and analyses required to replicate the results presented in the manuscript. There are separate folders for Study 1 and Study 2. All analyses were conducted in SPSS (28.0.1.1). Detailed information about the files can be found in the Readme.txt file. Contact person is Birgit Hasenack (b.hasenack@uu.nl).
DOI: 10.24416/uu01-la10tq
title: PCR-GLOBWB output - 4dHydro working package 5

description: 4dHydro working package 5 is dedicated to provided a set of land-surface and hydrological model community outputs for several calibration/assimilation experiments. These experiments include simulations over different resolutions and calibration/assimilation with earth-observed (EO) satellite products. The aim of these experiments is to investigate the added value of EO products for hydrological simulations. This data package contains the outputs for the PCR-GLOBWB hydrological model (globalhydrology.nl/research/models/pcr-globwb-2-0), which was developed at Utrecht University. See https://opensciencedata.4dhydro.eu/ for links to outputs from other models. Outputs are formatted according to the 4dHydro working package 5 storage protocol. For more information, please contact Bram Droppers (b.droppers@uu.nl) or Niko Wanders (n.wanders@uu.nl).
DOI: 10.24416/uu01-khitzq
title: Pre Industrial CESM data for Baatsen et al. 2020

description: Averages and climatologies of primary atmosphere and ocean data from the CESM1.0.5 pre-industrial reference (280ppm CO2 / 671ppb CH4)

This datapackage belongs to the Baatsen et al 2020 paper. There are two more datapackages:

- 2PIC CESM data for Baatsen et al. 2020
- 4PIC CESM data for Baatsen et al. 2020

that also belong to this paper. In fact there are three DOI's belonging to the paper which is a bit unhandy so we later created a new datapackage containing the same CESM data of all three simulations. This way we can refer to the paper with only one DOI, this new datapackage has DOI: 10.24416/UU01-KCSGFG
DOI: 10.24416/uu01-7i9xrx
title: Wayfinding with Impaired Vision: Preferences for Cues, Strategies, and Aids (Perspectives from People with Visual Impairments and Orientation and Mobility Instructors)

description: This data package contains data from two related interview studies revolving around how people with visual impairments learn and follow routes in their daily lives.
DOI: 10.24416/uu01-aynlzp
title: POP data for Nooteboom et al., in prep

description: Output of the eddying POP model simulations, using 38Ma paleogeography and 2 and 4 times atmospheric CO2 concentrations.
DOI: 10.24416/uu01-kq84du
title: PCR-GLOBWB output - 4dHydro working package 5

description: 4dHydro working package 5 is dedicated to provided a set of land-surface and hydrological model community outputs for several calibration/assimilation experiments. These experiments include simulations over different resolutions and calibration/assimilation with earth-observed (EO) satellite products. The aim of these experiments is to investigate the added value of EO products for hydrological simulations. This data package contains the outputs for the PCR-GLOBWB hydrological model (globalhydrology.nl/research/models/pcr-globwb-2-0), which was developed at Utrecht University. See https://opensciencedata.4dhydro.eu/ for links to outputs from other models. Outputs are formatted according to the 4dHydro working package 5 storage protocol. For more information, please contact Bram Droppers (b.droppers@uu.nl) or Niko Wanders (n.wanders@uu.nl).
DOI: 10.24416/uu01-y82u66
title: PCR-GLOBWB output - 4dHydro working package 5

description: 4dHydro working package 5 is dedicated to provided a set of land-surface and hydrological model community outputs for several calibration/assimilation experiments. These experiments include simulations over different resolutions and calibration/assimilation with earth-observed (EO) satellite products. The aim of these experiments is to investigate the added value of EO products for hydrological simulations. This data package contains the outputs for the PCR-GLOBWB hydrological model (globalhydrology.nl/research/models/pcr-globwb-2-0), which was developed at Utrecht University. See https://opensciencedata.4dhydro.eu/ for links to outputs from other models. Outputs are formatted according to the 4dHydro working package 5 storage protocol. For more information, please contact Bram Droppers (b.droppers@uu.nl) or Niko Wanders (n.wanders@uu.nl).
DOI: 10.5281/zenodo.18593259
title: Datset for "Polarization maintaining fiber beam delivery for direct laser interference patterning"

description: This repository contains the relevant experimental data supporting the results presented in “Polarization maintaining fiber beam delivery for direct laser interference patterning”.
DOI: 10.24416/uu01-3l9k99
title: UU Open Science Monitor 2020

description: YODA storage “research-osonderzoek”  

February 7, 2022 – Dominique Rijshouwer (c.d.n.rijshouwer@uu.nl; openscience@uu.nl)   

About the project:  

This data package contains all information relevant to the Project "UU Open Science Monitor 2020".   

Authors (alphabetical order):  
Loek Brinkman  
Judith de Haan  
Daniël van Hemert  
Joost de Laat  
Dominique Rijshouwer  
Sander Thomaes  
Ruth van Veelen  

  

Start date project: March 23, 2020  

Publication date package: February 7, 2022

This project was started by the Open Science Programme of Utrecht University. With this project the university aims to gain insight into what can be done to facilitate and support Open Science among academics at Utrecht University and University Medical Center Utrecht.    

The survey that was constructed to inform the programme contained questions about awareness, attitudes and behaviors regarding several Open Science practices, as well as questions about the opportunities and barriers in carrying out those practices. The survey also contained questions about the MERIT model of the recognition and rewards track, behavior during the COVID-19 pandemic, and questions about department culture and professional identity but these last four themes are not part of the Open Science Monitor 2020 report.  

In October 2021 the Open Science Monitor 2020 report (DOI: 10.5281/zenodo.5725178), based on the OS Monitor 2020 questionnaire, was published. It can be found on the Zenodo community of the Open Science Programme, together with the pre-registration of the project (DOI: 10.5281/zenodo.5727107) and the questionnaire itself (DOI: 10.5281/zenodo.5727058).   

The data in this data package are not made publicly available due to privacy restrictions. 

 The data in this package cannot be published openly, as it is privacy sensitive. We are working on a solution to give the public access to the data without having access to the sensitive information within the data. For now, anyone who is interested in a certain research question or analysis, can simply email their code (preferably SPSS syntax or R code) to the Open Science programme (openscience@uu.nl), and they will get back to you as soon as possible. If there are any other questions or suggestions related to this package or project, feel free to contact them for that as well.   

This project will be part of a larger long-term project with biennial Open Science Monitors. The Open Science Monitor 2022 Questionnaire is scheduled to go out in the spring of 2022. 

For more information about Open Science at Utrecht University, visit: www.uu.nl/en/research/open-science
DOI: 10.5281/zenodo.18593258
title: Datset for "Polarization maintaining fiber beam delivery for direct laser interference patterning"

description: This repository contains the relevant experimental data supporting the results presented in “Polarization maintaining fiber beam delivery for direct laser interference patterning”.
DOI: 10.24416/uu01-r1mhvt
title: Microtubule organization and molecular architecture of ciliary basal bodies in multiciliated airway cells

description: Raw microscopy data, analysis code and intermediate analysis steps for Figures 4-6 of preprint "Microtubule organization and molecular architecture of ciliary basal bodies in multiciliated airway cells"