cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25504/fairsharing.ad267f
title: FAIRsharing record for: UniSave
title: null

description: This FAIRsharing record describes:  UniSave is the UniProtKB Sequence/Annotation Version Archive and provide a repository containing every version of every Swiss-Prot/TrEMBL entry in the UniProt Knowledge Base (UniProtKB). This is achieved by archiving, every release, the entry versions within the current release.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.2f74d7
title: FAIRsharing record for: Pandora
title: null

description: This FAIRsharing record describes:  The Pandora initiative offers a platform for the secure storage of data concerning the study of the human story. This service is available to researchers devoted to the study of the human past (e.g. historians, archaeologists, paleoclimatologists).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.28181c
title: FAIRsharing record for: ISRO Science Data Archive
title: ISDA

description: This FAIRsharing record describes:  The ISRO Science Data Archive (ISDA) is India’s main repository for science data from national space missions, beginning with Chandrayaan-1. It stores a wide range of mission data, including raw and processed observations, calibration files, auxiliary datasets, and higher-level derived products such as images, spectra, and geophysical parameters.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.fe11bd
title: FAIRsharing record for: World Religion Database
title: WRD

description: This FAIRsharing record describes:  The World Religion Database (WRD) contains detailed statistics on religious affiliation for every country of the world. It provides information from country censuses as well as best estimates for every religion to offer a definitive picture of religion and non-religion in the past, present, and future.


description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.616846
title: FAIRsharing record for: Collaborative Research Centre 1211 Database
title: CRC1211DB

description: This FAIRsharing record describes:  The CRC1211DB is the project-database of the Collaborative Research Centre 1211 funded by the German Research Foundation (DFG). The database is able to archive and provide all research data that are created by the project participants. This includes measured/modeled data, reports, presentations, publications, and pictures. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.72eace
title: FAIRsharing record for:  NORPERM permafrost database
title: null

description: This FAIRsharing record describes:  The NORPERM permafrost database provides information on ground temperatures from boreholes and from the near-surface using miniloggers (MTDs).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.15468/dl.mwnbwf
title: Occurrence Download

description: A dataset containing 133865 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation)",
 "Continent is Asia",
 "Country is China",
 "OccurrenceStatus is Present",
 "StateProvince is Hebei",
 "TaxonKey is Animalia",
 "Year 2012-2023"
 ]
}

 The dataset includes 133865 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020503-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25504/fairsharing.201d7f
title: FAIRsharing record for: SIP-Archiv
title: null

description: This FAIRsharing record describes:  SIP-Archiv is a web application that enables the participating institutions to manage rock physical data from the measurement methodology "Spectral Induced Polarization (SIP)" in a common repository. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.9ec18f
title: FAIRsharing record for: The Preserve: Lehigh Library Digital Collections
title: Lehigh Preserve

description: This FAIRsharing record describes:  Lehigh Preserve is a repository based on the principle of open access. Lehigh Preserve collects, describes, distributes and preserves the scholarly output of the faculty, students, staff, and programs at Lehigh University, as well as digital materials from Special Collections. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.5bb2b3
title: FAIRsharing record for: Clinical Genomic Database
title: CDG

description: This FAIRsharing record describes:  The Clinical Genomic Database (CGD) is a manually curated database of conditions with known genetic causes, focusing on medically significant genetic data with available interventions. All conditions with identified genetic causes are included in the CGD. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.4f7043
title: FAIRsharing record for: NREL Data Catalog
title: null

description: This FAIRsharing record describes:  The NREL Data Catalog supports the lab’s mission by providing access to a searchable collection of the data behind the science and engineering funded by the U.S. Department of Energy (DOE).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.d1fabf
title: FAIRsharing record for: Oral Cancer Gene Database
title: OrCGDB

description: This FAIRsharing record describes:  OrCGDB is a user-friendly database containing information on 374 genes related to oral cancer including gene function mutations expression pathways and clinical relevance with search options and an interaction network linking gene relationships through PubMed references.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.97f0e4
title: FAIRsharing record for: Phenol-Explorer
title: null

description: This FAIRsharing record describes:  Phenol-Explorer is the first comprehensive database on polyphenol content in foods. The database contains more than 35,000 content values for 500 different polyphenols in over 400 foods. These data are derived from the systematic collection of more than 60,000 original content values found in more than 1,300 scientific publications. Each of these publications has been critically evaluated before inclusion in the database.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.14d3fb
title: FAIRsharing record for: Slovenian Social Science Data Archives 
title: ADP

description: This FAIRsharing record describes:  Slovenian Social Science Data Archives (ADP) was established in 1997 as an organizational unit of the Social Sciences Research Institute at the Faculty of Social Sciences, University of Ljubljana. It is a national research infrastructure for social sciences, whose main mission is to manage data and data services in order to support research, education, and general well-being.

Digital curation of high-quality research data that are openly accessible to researchers and other interested public is at the essence of the ADP activities.

Within its mission, the ADP establishes itself as a national infrastructure that collects important data sources from a wide range of social sciences, interesting for analyzing the Slovenian society, deposits, preserves and promotes their further use in scientific, educational and other purposes.

The Ministry of Education, Science, and Sports of the Republic of Slovenia has appointed ADP as the national data service provider for social sciences within its membership in CESSDA. The long-term national importance of the ADP is clear also in the ongoing support of the ministry, which from the establishment of ADP onwards ensures funding. Since 2004, the funding of operations has been provided within the infrastructure program Network of research infrastructure centers at the University of Ljubljana (MRIC UL).

ADP reports about its activities to the Council of ADP and to the Slovenian Research Agency that funds the infrastructure research program of the University of Ljubljana (MRIC UL).
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.628821
title: FAIRsharing record for: ACSS Dataverse
title: null

description: This FAIRsharing record describes:  The ACSS Dataverse is an initiative of the Arab Council for the Social Sciences, in collaboration with the Odum Institute for Research in Social Science at the University of North Carolina at Chapel Hill. The ACSS Dataverse contains social science datasets produced in Arab countries, with the goal of making data available for research in the region and preserving data for future generations of researchers.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.854526
title: FAIRsharing record for: Canine Inherited Disorders Database
title: CIDD

description: This FAIRsharing record describes:  The CIDD (Canine Inherited Disorders Database) is an online resource providing information on genetic disorders in dogs. It offers details about inheritance patterns, clinical consequences, diagnosis, and recommendations for care, directed to dog owners, veterinarians, and breeders. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.956646
title: FAIRsharing record for: DeZIM.fdz DataSearch
title: null

description: This FAIRsharing record describes:  DeZIM.fdz DataSearch is a metadata portal that lets users search and explore datasets related to integration and migration research. It is part of the DeZIM Institute’s research data centre, which archives both quantitative and qualitative survey data, as well as text corpora, from projects on migration and social integration.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.fff960
title: FAIRsharing record for: OPUS THD - Online Publication System of the Deggendorf Institute of Technology (DIT)
title: OPUS THD

description: This FAIRsharing record describes:  The online publication system OPUS THD is the central publication and archiving platform for all members of the Deggendorf Institute of Technology (DIT, in German: Technische Hochschule Deggendorf - THD). The full texts are provided with persistent identifiers (DOI, URN), are permanently available free of charge and can be retrieved via catalogues and search engines. All publications on OPUS THD are open access. Policies and statutory information: https://opus4.kobv.de/opus4-thd/home/index/help#policies.
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.25504/fairsharing.0ea19f
title: FAIRsharing record for: Austrian NeuroCloud
title: ANC

description: This FAIRsharing record describes:  The Austrian NeuroCloud (ANC) is a FAIR-enabling platform for sustainable research data management in cognitive neuroscience. It supports the entire data lifecycle, from acquisition and storage to validation, metadata curation, publishing, and sharing. The platform provides researchers with tools to ensure continuous data integrity, compliance with community standards, and controlled access to research data. 
description: The source of this description is the metadata record on FAIRsharing.org, an educational and informative resource that describes and links databases, standards, and data policies. FAIRsharing also creates collections of these resources and recommendations of databases and standards based on 3rd party data policies.
DOI: 10.17026/ar/nwzji7
title: PAN-00172880 - devotional pendant Modern period

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00172880&lt;/p&gt;
description: Modified: 2025-04-28T15:15:19+02:00
DOI: 10.5281/zenodo.17750854
title: Bulk RNAseq data from WT and Clec1a KO purified splenic cDC1 stimulated in vitro with IFNβ, Necrotic cells or E. coli.

description: Purified cDC1 stimulationSpleens and mesenteric lymph nodes from WT and Clec1a KO mice were recovered and underwent mechanical and enzymatic dissociation. The resulting cell suspension was then enriched in cDC1 cells. Purified  cDC1 cells were then sorted with by FACS (based on the expression of CD11c, MHCII and XCR1) using a Cytek Aurora spectral flow cytometer. Purified cDC1 were then plated in flat-bottom 96-well plates and stimulated with E. coli (MOI = 10), MCA-OVA UV-treated cells (ratio 1:10) or recombinant mouse IFNβ (1000 U/ml) for 6h. 

mini-bulk RNAseq library preparation and sequencingTreated cDC1 were resuspended in 4 technical replicates per condition (n=6 mice per genotype) at a concentration of 1250 cells/uL directly in lysis buffer containing 0.16uL 10% Triton X-100, 0.08 uL RNAse Out (40U/uL) and 3.75 uL RNAse DNAse free water. 5000 cells /well (= 4uL cell suspension /well) were then immediately loaded on a 96-plate using an OT-2 library prep robot (Opentrons). 1uL barcoded RT-primers with universal adapters, well-specific barcodes, and unique molecular identifiers were then added to the wells and incubated at 72°C for 3 min before reverse transcription. Barcoded complementary DNAs from multiple samples were then pooled, amplified, and tagmented using a transposon fragmentation approach which enriches for 3′ ends of complementary DNA. A library of 350 to 800 bp was run on a 100-cycle 1.5B flow cell on the NOVAseq X-plus series at the Genomics Antlantic platform (Nantes) facility (Nantes). An average of 5 million 75 bp single-end reads were obtained for each sample. Samples were demultiplexed and aligned to the GRCm38 (mm10) genome using the DGE bioinformatics pipeline. Post-sequencing, data demultiplexing was performed using Illumina bcl2fastq. The resulting FASTQ files were analyzed using the 3’ Sequencing RNA Profiling (SRP) pipeline (Charpentier et al., 2021, DOI : 10.21203/RS.3.PEX-1336/V1). 

RNAseq data analysisDifferential gene expression (DGE) analysis was performed by using the DESeq2 package (v1.46.0).

Provided data

The data provided correspond to the dds object obtained with the DESeq2 R package containing the RNAseq data (cDC1_Stim_RNAseq_DGEseq_DDS) as well as DGE results in .xlsx format (mBulk_DEG_results).
DOI: 10.5281/zenodo.17750853
title: Bulk RNAseq data from WT and Clec1a KO purified splenic cDC1 stimulated in vitro with IFNβ, Necrotic cells or E. coli.

description: Purified cDC1 stimulationSpleens and mesenteric lymph nodes from WT and Clec1a KO mice were recovered and underwent mechanical and enzymatic dissociation. The resulting cell suspension was then enriched in cDC1 cells. Purified  cDC1 cells were then sorted with by FACS (based on the expression of CD11c, MHCII and XCR1) using a Cytek Aurora spectral flow cytometer. Purified cDC1 were then plated in flat-bottom 96-well plates and stimulated with E. coli (MOI = 10), MCA-OVA UV-treated cells (ratio 1:10) or recombinant mouse IFNβ (1000 U/ml) for 6h. 

mini-bulk RNAseq library preparation and sequencingTreated cDC1 were resuspended in 4 technical replicates per condition (n=6 mice per genotype) at a concentration of 1250 cells/uL directly in lysis buffer containing 0.16uL 10% Triton X-100, 0.08 uL RNAse Out (40U/uL) and 3.75 uL RNAse DNAse free water. 5000 cells /well (= 4uL cell suspension /well) were then immediately loaded on a 96-plate using an OT-2 library prep robot (Opentrons). 1uL barcoded RT-primers with universal adapters, well-specific barcodes, and unique molecular identifiers were then added to the wells and incubated at 72°C for 3 min before reverse transcription. Barcoded complementary DNAs from multiple samples were then pooled, amplified, and tagmented using a transposon fragmentation approach which enriches for 3′ ends of complementary DNA. A library of 350 to 800 bp was run on a 100-cycle 1.5B flow cell on the NOVAseq X-plus series at the Genomics Antlantic platform (Nantes) facility (Nantes). An average of 5 million 75 bp single-end reads were obtained for each sample. Samples were demultiplexed and aligned to the GRCm38 (mm10) genome using the DGE bioinformatics pipeline. Post-sequencing, data demultiplexing was performed using Illumina bcl2fastq. The resulting FASTQ files were analyzed using the 3’ Sequencing RNA Profiling (SRP) pipeline (Charpentier et al., 2021, DOI : 10.21203/RS.3.PEX-1336/V1). 

RNAseq data analysisDifferential gene expression (DGE) analysis was performed by using the DESeq2 package (v1.46.0).

Provided data

The data provided correspond to the dds object obtained with the DESeq2 R package containing the RNAseq data (cDC1_Stim_RNAseq_DGEseq_DDS) as well as DGE results in .xlsx format (mBulk_DEG_results).
DOI: 10.15468/dl.eca8cz
title: Occurrence Download

description: A dataset containing 1176 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Solanum orbiculatum",
 "HasCoordinate is true"
 ]
}

 The dataset includes 1176 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020528-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17026/ar/ptmkc0
title: PAN-00173036 - devotional pendant Modern period

description: &lt;p&gt;This find is registered at Portable Antiquities of the Netherlands with number PAN-00173036&lt;/p&gt;
description: Modified: 2025-04-28T14:47:54+02:00
DOI: 10.25625/8fqzzf/tqvytf
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/a0jdpz
title: log_gt_positions.tab

description: :unav
DOI: 10.25625/8fqzzf/sokudu
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/ztpulf
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/h2kri9
title: log_tracks.tab

description: :unav
DOI: 10.25625/8fqzzf/bhabal
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/fdimwx
title: log_tracks.tab

description: :unav
DOI: 10.25625/8fqzzf/g1uric
title: log_gt_positions.tab

description: :unav
DOI: 10.25625/8fqzzf/ervoee
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/qetlxd
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/msrbw9
title: log_tracks.tab

description: :unav
DOI: 10.25625/8fqzzf/sytfvj
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/l2sjc5
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/ffvlwt
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/u0kz9j
title: log_gt_positions.tab

description: :unav
DOI: 10.25625/8fqzzf/trwi0h
title: log_gt_positions.tab

description: :unav
DOI: 10.25625/8fqzzf/lkssud
title: log_gt_positions.tab

description: :unav
DOI: 10.25625/8fqzzf/xipsei
title: log_tracks.tab

description: :unav
DOI: 10.25625/8fqzzf/jhuxhm
title: log_gt_positions.tab

description: :unav
DOI: 10.25625/8fqzzf/at8plx
title: log_tracks.tab

description: :unav
DOI: 10.25625/8fqzzf/aoxfkk
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/noktva
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/1qafpd
title: log_gt_positions.tab

description: :unav
DOI: 10.25625/8fqzzf/97ksy2
title: log_tracks.tab

description: :unav
DOI: 10.25625/8fqzzf/jgmiqn
title: log_tracks.tab

description: :unav
DOI: 10.25625/8fqzzf/pa3fxm
title: log_tracks.tab

description: :unav
DOI: 10.25625/8fqzzf/gjl4pu
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/tqb2ap
title: log_tracks.tab

description: :unav
DOI: 10.25625/8fqzzf/yj9z95
title: log_gt_positions.tab

description: :unav
DOI: 10.25625/8fqzzf/tygias
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/v0hbo6
title: log_sensor_pos.tab

description: :unav
DOI: 10.25625/8fqzzf/i30u4s
title: log_gt_positions.tab

description: :unav