cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.14197161
title: Habitat mapping of coastal dunes with deep learning - Scripts & Data

description: Authors: Eva M. Lansu, Valérie C. Reijers, Freek Daniëls, Rebecca James, Marjolijn J. A. Christianen, Tjisse van der Heide

 

Abstract

About one-third of the world's shoreline is defined by sandy coasts with developed dune ecosystems. These ecosystems drastically degraded them due to anthropogenic pressures. To develop strategic management that counteracts this degradation, it is essential to closely monitor ongoing habitat changes. Traditionally, coastal dune monitoring is based on field observations, which are labour intensive and costly. While automated analyses of aerial imagery could reduce monitoring efforts and enhance spatial coverage, to date, its application has remained limited to a single small-scale trial (<2 km2). Here, we trained a Convolutional Neural Network to map the Dutch coastal dunes (562 km2) at 25 cm resolution using six habitat classes: bare sand, shrubs, fresh water, grass, broadleaf trees, and needleleaf trees. Training the network on only RGB imagery resulted in predictions with 92% accuracy, 80% average recall and 70% precision. Model performance increased when the network was trained on all available data - RGB imagery, near-infrared, distance to sea, digital surface model, and canopy height - resulting in 95% accuracy, 88% averaged recall and 80% precision. Finally, we compared the predictions with 499 in-field observations across the Dutch coastal dunes and found 88% accuracy, 74% averaged recall and 62% precision. We used this model to create a map of the entire Dutch coastal dunes, which enables rapid and precise assessments of habitat diversity and extent. As habitat and species diversity are intrinsically linked, our results showcase how automated image analysis can enable biodiversity monitoring on a national scale. 

==============================================

Methods

The analyses rely on the following datasets:



Orthophoto mosaics including a near-infrared band (from http://geotiles.nl/)

Digital surface model and a digital terrain model (from https://www.ahn.nl/)

A land-use map (from https://lgn.nl/basiskaart)
DOI: 10.5281/zenodo.14197160
title: Habitat mapping of coastal dunes with deep learning - Scripts & Data

description: Authors: Eva M. Lansu, Valérie C. Reijers, Freek Daniëls, Rebecca James, Marjolijn J. A. Christianen, Tjisse van der Heide

 

Abstract

About one-third of the world's shoreline is defined by sandy coasts with developed dune ecosystems. These ecosystems drastically degraded them due to anthropogenic pressures. To develop strategic management that counteracts this degradation, it is essential to closely monitor ongoing habitat changes. Traditionally, coastal dune monitoring is based on field observations, which are labour intensive and costly. While automated analyses of aerial imagery could reduce monitoring efforts and enhance spatial coverage, to date, its application has remained limited to a single small-scale trial (<2 km2). Here, we trained a Convolutional Neural Network to map the Dutch coastal dunes (562 km2) at 25 cm resolution using six habitat classes: bare sand, shrubs, fresh water, grass, broadleaf trees, and needleleaf trees. Training the network on only RGB imagery resulted in predictions with 92% accuracy, 80% average recall and 70% precision. Model performance increased when the network was trained on all available data - RGB imagery, near-infrared, distance to sea, digital surface model, and canopy height - resulting in 95% accuracy, 88% averaged recall and 80% precision. Finally, we compared the predictions with 499 in-field observations across the Dutch coastal dunes and found 88% accuracy, 74% averaged recall and 62% precision. We used this model to create a map of the entire Dutch coastal dunes, which enables rapid and precise assessments of habitat diversity and extent. As habitat and species diversity are intrinsically linked, our results showcase how automated image analysis can enable biodiversity monitoring on a national scale. 

==============================================

Methods

The analyses rely on the following datasets:



Orthophoto mosaics including a near-infrared band (from http://geotiles.nl/)

Digital surface model and a digital terrain model (from https://www.ahn.nl/)

A land-use map (from https://lgn.nl/basiskaart)
DOI: 10.15468/dl.usz727
title: Occurrence Download

description: A dataset containing 2711 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Europe",
 "Country is Romania",
 "DatasetKey is one of (alien_plant_ro, alien_plant_species_ro)",
 "GbifRegion is Europe and Central Asia",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Issue is Coordinate rounded",
 "OccurrenceStatus is Present",
 "TaxonKey is Ambrosia artemisiifolia L."
 ]
}

 The dataset includes 2711 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010990-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh1048694.10fu
title: SH1048694.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh1048695.10fu
title: SH1048695.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.ffzb24
title: Occurrence Download

description: A dataset containing 14781 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (Spain, Portugal)",
 "TaxonKey is Herpestes ichneumon (Linnaeus, 1758)"
 ]
}

 The dataset includes 14781 records from 29 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011802-240202131308920/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-3275
title: Investigation of the Glendale Police Department’s hiring & employment practices..., v. 1, 1988-01

description: Reports - Ochoa and Sillas. "Investigation of the Glendale Police Department’s hiring and employment practices as they pertain to racial and ethnic minorities, volume I", 1988 January, received, 1991 April 4. PART OF A SERIES: The series consists of miscellaneous source materials that were collected and analyzed over the course of the Independent Commission's investigation. Included are the following: article clippings pertaining to the Rodney King incident; legal materials related to the Gates v. Board of Los Angeles Police Commissioners case, including appellate documents, court transcripts, preliminary injunctions, and briefs; black-and-white photographs; essays and articles related to police misconduct; issues of The Thin Blue Line, the Los Angeles Police Protective League's monthly publication, and Perspectives on Policing, a newsletter published by the United States Department of Justice; materials regarding policing issues in other major United States cities, including commission reports and Pate and Hamilton's book The Big Six: Policing America's Largest Cities; supplemental materials and appendices to the Independent Commission's report; requests for copies of the Commission report; transcripts from public hearings conducted by members of the Commission; and instructional materials related to the Video Incident Capture System, a video camera system that provides video and audio records of police officers' activities while on patrol.
DOI: 10.15468/dl.gu44ru
title: Occurrence Download

description: A dataset containing 30524 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Russian Federation",
 "Geometry POLYGON ((65.390625 69.38650068766493, 63.28125 53.707109944543255, 76.640625 53.707109944543255, 87.890625 50.69193131140707, 104.0625 51.57433575655952, 117.42187500000001 50.24439187454156, 123.74999999999999 53.707109944543255, 132.890625 47.46968943585644, 133.59375 43.01749749949318, 152.578125 46.99224076560023, 194.0625 66.48522083656208, 174.375 74.38324439706692, 132.1875 76.82479871808438, 113.90625 78.75408680164834, 77.34374999999999 76.66357472363448, 63.984375 73.40835658394874, 65.390625 69.38650068766493))",
 "TaxonKey is Tracheophyta"
 ]
}

 The dataset includes 30524 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002262-171113114016250/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-3518
title: Report of the Governor's Panel to Review Police Training Programs, 1989-05

description: Reports - Report of the Governor's Panel to Review Police Training Programs, 1989 May. Also John M. Callahan (Growhoski, Callahan, MIles & Kundl), 60 State Street, Northampton, Massachusetts, letter, 1991 April 10, to Warren Christopher (O'Melveny & Myers), 400 South Hope Street, Los Angeles, California. PART OF A SERIES: The series consists of miscellaneous source materials that were collected and analyzed over the course of the Independent Commission's investigation. Included are the following: article clippings pertaining to the Rodney King incident; legal materials related to the Gates v. Board of Los Angeles Police Commissioners case, including appellate documents, court transcripts, preliminary injunctions, and briefs; black-and-white photographs; essays and articles related to police misconduct; issues of The Thin Blue Line, the Los Angeles Police Protective League's monthly publication, and Perspectives on Policing, a newsletter published by the United States Department of Justice; materials regarding policing issues in other major United States cities, including commission reports and Pate and Hamilton's book The Big Six: Policing America's Largest Cities; supplemental materials and appendices to the Independent Commission's report; requests for copies of the Commission report; transcripts from public hearings conducted by members of the Commission; and instructional materials related to the Video Incident Capture System, a video camera system that provides video and audio records of police officers' activities while on patrol.
DOI: 10.15468/dl.xgqa6y
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Astragalus kongurensis Podlech"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032984-240229165702484/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-3551
title: Report of the Governor's Panel to Review Police Training Programs, 1989-05

description: Reports - Report of the Governor's Panel to Review Police Training Programs, 1989 May. Also John M. Callahan (Growhoski, Callahan, MIles & Kundl), 60 State Street, Northampton, Massachusetts, letter, 1991 April 10, to Warren Christopher (O'Melveny & Myers), 400 South Hope Street, Los Angeles, California. PART OF A SERIES: The series consists of miscellaneous source materials that were collected and analyzed over the course of the Independent Commission's investigation. Included are the following: article clippings pertaining to the Rodney King incident; legal materials related to the Gates v. Board of Los Angeles Police Commissioners case, including appellate documents, court transcripts, preliminary injunctions, and briefs; black-and-white photographs; essays and articles related to police misconduct; issues of The Thin Blue Line, the Los Angeles Police Protective League's monthly publication, and Perspectives on Policing, a newsletter published by the United States Department of Justice; materials regarding policing issues in other major United States cities, including commission reports and Pate and Hamilton's book The Big Six: Policing America's Largest Cities; supplemental materials and appendices to the Independent Commission's report; requests for copies of the Commission report; transcripts from public hearings conducted by members of the Commission; and instructional materials related to the Video Incident Capture System, a video camera system that provides video and audio records of police officers' activities while on patrol.
DOI: 10.15468/dl.txueb5
title: Occurrence Download

description: A dataset containing 34 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Odocoileus virginianus virginianus",
 "HasCoordinate is true"
 ]
}

 The dataset includes 34 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002263-150330110031120/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-40953
title: Police officer summary info for 83 cases R, 1991

description: Collection of material re case summaries of the 83 selected cases by the Independent Commission - cases against LAPD - Alphabetized by last name - Section "R" (1950-1990), 1991 May 29 - June 18. Folder / binder 5. Police officer summary info for "83 Cases" R-Z (1 of 3). PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.15468/dl.rfcxm9
title: Occurrence Download

description: A dataset containing 62468 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "TaxonKey is Momotus aequatorialis Gould, 1858"
 ]
}

 The dataset includes 62468 records from 130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0053563-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.kuhvx3
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Podocarpus cardenasii J.T.Buchholz & N.E.Gray"
 ]
}

 The dataset includes 4 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002263-150422101436696/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-37373
title: Police officer summary info for 83 cases S, 1991

description: Collection of material re case summaries of the 83 selected cases by the Independent Commission - cases against LAPD - Alphabetized by last name - Section "S" (1947-1991), 1991 May 24 - June 17. Folder / binder 5. Police officer summary info for "83 Cases" R-Z (2 of 3). PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.15468/dl.pdszxa
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is one of (CHN.15_1, CHN.31_1, CHN.1_1, CHN.24_1)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Macaca mulatta (Zimmermann, 1780), Lutra lutra (Linnaeus, 1758))"
 ]
}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0054995-231002084531237/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/independent-c69-37288
title: Police officer summary info for 83 cases S, 1991

description: Collection of material re case summaries of the 83 selected cases by the Independent Commission - cases against LAPD - Alphabetized by last name - Section "S" (1947-1991), 1991 May 24 - June 17. Folder / binder 5. Police officer summary info for "83 Cases" R-Z (2 of 3). PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.25549/independent-c69-37283
title: Police officer summary info for 83 cases S, 1991

description: Collection of material re case summaries of the 83 selected cases by the Independent Commission - cases against LAPD - Alphabetized by last name - Section "S" (1947-1991), 1991 May 24 - June 17. Folder / binder 5. Police officer summary info for "83 Cases" R-Z (2 of 3). PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.25549/independent-c69-33120
title: Claims (GX 13106 - GX 13463), 1987

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1987. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.25549/independent-c69-33118
title: Claims (GX 13106 - GX 13463), 1987

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1987. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.25549/independent-c69-33095
title: Claims (GX 13106 - GX 13463), 1987

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1987. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.
DOI: 10.25549/independent-c69-33081
title: Claims (GX 13106 - GX 13463), 1987

description: Collection of claims filed against the LAPD with regards ranging from wrongful death to violation of civil rights, etc., 1987. PART OF A SERIES: The series includes materials related to the work product of Price Waterhouse, whose staff investigated citizen complaints and civil litigation claims involving the LAPD. Included are claims reports, claims analyses, card files, and arbitration reports; summaries of 83 selected civil litigation cases; materials from the personnel files of LAPD officers named in these cases, as well as documents listing their subsequent penalties; and statistics that break complaints down according to a variety of criteria, including race, gender, and police division.