cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.9118949.v1
title: Analyzing the Students’ Perception of UML Diagrams: Instruments Used in Evaluation

description: Unified Modeling Language (UML) has been adopted as a standard modeling language in the software industry for the graphical representation of analysis and design models. Due to its importance, UML is taught in most undergraduate majors in Software Engineering and Computing. However, little is known about the students’ perception regarding the UML diagrams. We conducted an exploratory study to investigate the students’ perception regarding UML diagrams acceptance. In this study, we investigated five UML diagrams taught for the undergraduate students from Federal University of Amazonas. These UML diagrams are: class diagrams, use case diagrams (and specifications), sequence diagrams, state machine diagrams, and activity diagrams. In order to evaluate the perceptions of senior undergraduate students on UML diagrams and thus help instructors improving the teaching of its importance, we applied Technology Acceptance Model (TAM) questionnaires. This technical report presents the TAM questionnaires for each UML diagram. Thus, other researchers may replicate it, providing outcomes in different contexts.
DOI: 10.6084/m9.figshare.9118952
title: Analyzing the Students’ Perception of UML Diagrams: Results of the TAM (Technology Acceptance Model)

description: Models taught in Software Engineering disciplines can facilitate the communication and understanding of systems by practitioners. These models can be expressed by Unified Modeling Language (UML). In the literature, existing reports how professionals perceive the adoption of UML in practice. However, little is known about the students’ perception regarding these models. In this technical report, we present the students’ answers to the Technology Acceptance Model (TAM) questionnaires for five UML diagrams.
DOI: 10.6084/m9.figshare.9118976
title: qqh CSC data

description: Dataset show ‘Cancer stem-like cells with hybrid epithelial/mesenchymal phenotype leading the collective invasion ’ , each fig data in different sheets in order.
DOI: 10.6084/m9.figshare.9118976.v1
title: qqh CSC data

description: Dataset show ‘Cancer stem-like cells with hybrid epithelial/mesenchymal phenotype leading the collective invasion ’ , each fig data in different sheets in order.
DOI: 10.6084/m9.figshare.9119015
title: Reorganization of mcr-1-bearing large MDR plasmids resolved by nanopore sequencing

description: Three fused mcr-1-bearing plasmids with sizes 390532bp (pTLD91-1-390kb), 352115bp (pTLD91-1-352kb) and 297916bp (pTLD91-1-297kb) were deposited here for reference.
DOI: 10.6084/m9.figshare.9119015.v1
title: Untitled ItemReorganization of mcr-1-bearing large MDR plasmids resolved by nanopore sequencing

description: Three hybrid mcr-1-bearing plasmids with sizes 390532bp (pTLD91-390kb), 352115bp (pTLD91-352kb) and 297916bp (pTLD91-297kb) were deposited here for reference.
DOI: 10.6084/m9.figshare.9118820
title: Questionnaire

description: Test
DOI: 10.6084/m9.figshare.9118835
title: pat 10 MRI

description: Admire, Pinnacle, and Velocity denote structure sets after a deformable or rigid registration was applied to the MRI holding the CT as primary.
DOI: 10.6084/m9.figshare.9118904.v1
title: pat 11 MRI

description: Admire, Pinnacle, and Velocity denote structure sets after a deformable or rigid registration was applied to the MRI holding the CT as primary.
DOI: 10.6084/m9.figshare.9118919
title: pat 12 MRI

description: Admire, Pinnacle, and Velocity denote structure sets after a deformable or rigid registration was applied to the MRI holding the CT as primary.
DOI: 10.6084/m9.figshare.9119138
title: Additional file 1: of Oral candidiasis is a significant predictor of subsequent severe infections during immunosuppressive therapy in anti-neutrophil cytoplasmic antibody-associated vasculitis

description: The anonymous data set of 71 patients with AAV. (XLSX 22 kb)
DOI: 10.6084/m9.figshare.9119138.v1
title: Additional file 1: of Oral candidiasis is a significant predictor of subsequent severe infections during immunosuppressive therapy in anti-neutrophil cytoplasmic antibody-associated vasculitis

description: The anonymous data set of 71 patients with AAV. (XLSX 22 kb)
DOI: 10.6084/m9.figshare.9118910
title: pat 12 CT

description: Admire, Pinnacle, and Velocity denote structure sets after a deformable or rigid registration was applied to the MRI holding the CT as primary.
DOI: 10.6084/m9.figshare.9119216.v1
title: MOESM1 of Does globalization accelerate economic growth? South Asian experience using panel data

description: Additional file 1. Datasets.
DOI: 10.6084/m9.figshare.9119264.v1
title: Additional file 1: of The genome of the live-bearing fish Heterandria formosa implicates a role of conserved vertebrate genes in the evolution of placental fish

description: Table S1. Literature study on all genes positively selected exclusively in H. formosa. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.9119267
title: Additional file 2: of The genome of the live-bearing fish Heterandria formosa implicates a role of conserved vertebrate genes in the evolution of placental fish

description: Table S2. GO terms significantly enriched in positively selected genes in H. formosa, using a list of all tested genes ranked by p-value. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9119267.v1
title: Additional file 2: of The genome of the live-bearing fish Heterandria formosa implicates a role of conserved vertebrate genes in the evolution of placental fish

description: Table S2. GO terms significantly enriched in positively selected genes in H. formosa, using a list of all tested genes ranked by p-value. (XLSX 11 kb)
DOI: 10.6084/m9.figshare.9119996.v1
title: Heavy-load resistance exercise during chemotherapy in physically inactive breast cancer survivors at risk for lymphedema: a randomized trial

description: <b>Background:</b> Due to long-standing concerns that heavy-load lifting could increase the risk of developing lymphedema, breast cancer survivors have been advised to refrain from resistance exercise with heavy loads. This study prospectively evaluated the effect of heavy-load resistance exercise on lymphedema development in women receiving chemotherapy for breast cancer. <b>Material and Methods:</b> Physically inactive women receiving adjuvant chemotherapy for breast cancer (<i>n</i> = 153) were randomized to a HIGH (supervised, multimodal exercise including heavy-load resistance exercise: 85–90% 1 repetition maximum [RM], three sets of 5–8 repetitions) versus LOW (pedometer and one-on-one consultations) 12-week intervention. Outcomes (baseline, 12 and 39 weeks) included lymphedema status (extracellular fluid [bioimpedance spectroscopy] and inter-arm volume % difference [dual-energy X-ray absorptiometry], lymphedema symptoms [numeric rating scale 0–10]), upper-extremity strength (1 RM), and quality of life domains (EORTC- BR23). Linear mixed models were used to evaluate equivalence between groups for lymphedema outcomes (equivalence margins for L-Dex, % difference and symptoms scale: ±5, ±3% and ±1, respectively). Superiority analysis was conducted for muscle strength and quality of life domains. <b>Results:</b> Postintervention equivalence between groups was found for extracellular fluid (0.4; 90% CI −2.5 to 3.2) and symptoms of heaviness (−0.2; −0.6 to 0.2), tightness (−0.1; −0.8 to 0.6) and swelling (0.2; −0.4 to 0.8). Nonequivalence was found for inter-arm volume % difference (−3.5%; −17.3 to 10.3) and pain (−0.7; −1.3 to 0), favoring HIGH. Strength gains were superior in the HIGH versus LOW group (3 kg; 1 to 5, <i>p</i> <b>Conclusion:</b> Findings suggest that physically inactive breast cancer survivors can benefit from supervised heavy-load resistance exercise during chemotherapy without increasing lymphedema risk. <b>Trial registration:</b> ISRCTN13816000
DOI: 10.6084/m9.figshare.9119216
title: MOESM1 of Does globalization accelerate economic growth? South Asian experience using panel data

description: Additional file 1. Datasets.
DOI: 10.6084/m9.figshare.9119264
title: Additional file 1: of The genome of the live-bearing fish Heterandria formosa implicates a role of conserved vertebrate genes in the evolution of placental fish

description: Table S1. Literature study on all genes positively selected exclusively in H. formosa. (XLSX 16 kb)
DOI: 10.6084/m9.figshare.9119447
title: Additional file 1: of 1k-RiCA (1K-Rice Custom Amplicon) a novel genotyping amplicon-based SNP assay for genetics and breeding applications in rice

description: S1. List of accessions used in this study. S2. SNP call pipelined used to identify genotypes in the 1k-RiCA. S3. List of 995 SNPs contained in the 1k-RiCA. S4. Hap-map formatted 1k-RiCA genotypic data on 283 lines used in the O. sativa PCA. S5. Hap-map formatted 1k-RiCA genotypic data on 431 lines used in the O. sativa ssp. indica diversity analysis. S6. Hap-map formatted 1k-RiCA genotypic data on 57 F1 lines and their parents used in the F1 analysis. S7. Hap-map formatted 1k-RiCA genotypic data on 353 lines used in the genomic selection cross-validation experiments. S8. Adjusted phenotypic means for FLW, GY, and PH on 353 lines used in the genomic selection cross-validation experiments. (XLSX 8888 kb)
DOI: 10.6084/m9.figshare.9119996
title: Heavy-load resistance exercise during chemotherapy in physically inactive breast cancer survivors at risk for lymphedema: a randomized trial

description: <b>Background:</b> Due to long-standing concerns that heavy-load lifting could increase the risk of developing lymphedema, breast cancer survivors have been advised to refrain from resistance exercise with heavy loads. This study prospectively evaluated the effect of heavy-load resistance exercise on lymphedema development in women receiving chemotherapy for breast cancer. <b>Material and Methods:</b> Physically inactive women receiving adjuvant chemotherapy for breast cancer (<i>n</i> = 153) were randomized to a HIGH (supervised, multimodal exercise including heavy-load resistance exercise: 85–90% 1 repetition maximum [RM], three sets of 5–8 repetitions) versus LOW (pedometer and one-on-one consultations) 12-week intervention. Outcomes (baseline, 12 and 39 weeks) included lymphedema status (extracellular fluid [bioimpedance spectroscopy] and inter-arm volume % difference [dual-energy X-ray absorptiometry], lymphedema symptoms [numeric rating scale 0–10]), upper-extremity strength (1 RM), and quality of life domains (EORTC- BR23). Linear mixed models were used to evaluate equivalence between groups for lymphedema outcomes (equivalence margins for L-Dex, % difference and symptoms scale: ±5, ±3% and ±1, respectively). Superiority analysis was conducted for muscle strength and quality of life domains. <b>Results:</b> Postintervention equivalence between groups was found for extracellular fluid (0.4; 90% CI −2.5 to 3.2) and symptoms of heaviness (−0.2; −0.6 to 0.2), tightness (−0.1; −0.8 to 0.6) and swelling (0.2; −0.4 to 0.8). Nonequivalence was found for inter-arm volume % difference (−3.5%; −17.3 to 10.3) and pain (−0.7; −1.3 to 0), favoring HIGH. Strength gains were superior in the HIGH versus LOW group (3 kg; 1 to 5, <i>p</i> <b>Conclusion:</b> Findings suggest that physically inactive breast cancer survivors can benefit from supervised heavy-load resistance exercise during chemotherapy without increasing lymphedema risk. <b>Trial registration:</b> ISRCTN13816000
DOI: 10.6084/m9.figshare.9119447.v1
title: Additional file 1: of 1k-RiCA (1K-Rice Custom Amplicon) a novel genotyping amplicon-based SNP assay for genetics and breeding applications in rice

description: S1. List of accessions used in this study. S2. SNP call pipelined used to identify genotypes in the 1k-RiCA. S3. List of 995 SNPs contained in the 1k-RiCA. S4. Hap-map formatted 1k-RiCA genotypic data on 283 lines used in the O. sativa PCA. S5. Hap-map formatted 1k-RiCA genotypic data on 431 lines used in the O. sativa ssp. indica diversity analysis. S6. Hap-map formatted 1k-RiCA genotypic data on 57 F1 lines and their parents used in the F1 analysis. S7. Hap-map formatted 1k-RiCA genotypic data on 353 lines used in the genomic selection cross-validation experiments. S8. Adjusted phenotypic means for FLW, GY, and PH on 353 lines used in the genomic selection cross-validation experiments. (XLSX 8888 kb)
DOI: 10.6084/m9.figshare.9119921
title: Tree Lab Data

description: All data from Tree lab.
DOI: 10.6084/m9.figshare.9120026
title: Dataset from Attachment-based mechanisms underlying capture and release of pollen grains

description: Dataset to support this article
DOI: 10.6084/m9.figshare.9120926.v1
title: Raw data to Figures

description: Data for figures 1, 3, 4, 5 and supplement figures S3, S4, S5<br>
DOI: 10.6084/m9.figshare.9121316
title: christian-tutorial-data-STAMPS2019

description: christian-tutorial-data-STAMPS2019
DOI: 10.6084/m9.figshare.9121322.v1
title: Untitled Item

description: We investigate the correlation between preoperative De Ritis ratio (aspartate transaminase [AST]/alanine transaminase [ALT]) and postoperative clinical outcome in patients with upper urinary tract carcinoma (UTUC) who underwent radical nephroureterectomy (RNU) and adjuvant chemotherapy (ACH)
DOI: 10.6084/m9.figshare.9121322.v2
title: De Ritis ratio (aspartate transaminase/alanine transaminase) as a significant prognostic factor with upper urinary tract carcinoma who underwent radical nephroureterectomy and adjuvant chemotherapy

description: We investigate the correlation between preoperative De Ritis ratio (aspartate transaminase [AST]/alanine transaminase [ALT]) and postoperative clinical outcome in patients with upper urinary tract carcinoma (UTUC) who underwent radical nephroureterectomy (RNU) and adjuvant chemotherapy (ACH)
DOI: 10.6084/m9.figshare.3761562.v1174
title: Online Labour Index: Measuring the Online Gig Economy for Policy and Research

description: Data repository for the data underlying the Online Labour Index. See http://ilabour.oii.ox.ac.uk online-labour-index/ for details.
DOI: 10.6084/m9.figshare.9120161.v1
title: Simultaneous coordination of order quantity and corporate social responsibility in a two-Echelon supply chain: A combined contract approach

description: The main aim of this paper is to synthesize CSR issue into channel coordination. Accordingly, the CSR issue is studied in a manufacturer-retailer chain under two cases: (1) the manufacturer invests in CSR, and (2) the retailer invests in CSR. Each case is explored in terms of the individual profitability of supply chain (SC) members and the amount of CSR investment. Moreover, we propose a hybrid of wholesale and buyback contract to resolve the channel conflict in both cases. Additionally, a Nash bargaining model is applied to share the surplus profit between SC players. Under decentralized setting, the numerical results indicate that both cases bring almost the same results for the members regarding their profitability, but regarding the investment in the CSR issues, the M-CSR case is remarkably superior to the R-CSR case. Moreover, the Nash bargaining model provides a win-win situation for both SC members in each case.
DOI: 10.6084/m9.figshare.9121316.v1
title: christian-tutorial-data-STAMPS2019

description: christian-tutorial-data-STAMPS2019
DOI: 10.6084/m9.figshare.9121316.v2
title: christian-tutorial-data-STAMPS2019

description: christian-tutorial-data-STAMPS2019
DOI: 10.6084/m9.figshare.9121322
title: De Ritis ratio (aspartate transaminase/alanine transaminase) as a significant prognostic factor with upper urinary tract carcinoma who underwent radical nephroureterectomy and adjuvant chemotherapy

description: We investigate the correlation between preoperative De Ritis ratio (aspartate transaminase [AST]/alanine transaminase [ALT]) and postoperative clinical outcome in patients with upper urinary tract carcinoma (UTUC) who underwent radical nephroureterectomy (RNU) and adjuvant chemotherapy (ACH)
DOI: 10.6084/m9.figshare.9120926
title: Raw data to Figures

description: Data for figures 1, 3, 4, 5 and supplement figures S3, S4, S5<br>
DOI: 10.6084/m9.figshare.9121406
title: Additional file 3: of Ambulatory monitoring unmasks hypertension among kidney transplant patients: single center experience and review of the literature

description: Table S1. Benjamini-Hochberg adjusted p-values corresponding to the association matrix presented in Table 4 (values
DOI: 10.6084/m9.figshare.9121406.v1
title: Additional file 3: of Ambulatory monitoring unmasks hypertension among kidney transplant patients: single center experience and review of the literature

description: Table S1. Benjamini-Hochberg adjusted p-values corresponding to the association matrix presented in Table 4 (values
DOI: 10.6084/m9.figshare.9121481
title: Additional file 1: of Study of the antitumor mechanisms of apiole derivatives (AP-02) from Petroselinum crispum through induction of G0/G1 phase cell cycle arrest in human COLO 205 cancer cells

description: Chemical synthesis of AP-02 and AP-04. (ZIP 6 kb)
DOI: 10.6084/m9.figshare.9121481.v1
title: Additional file 1: of Study of the antitumor mechanisms of apiole derivatives (AP-02) from Petroselinum crispum through induction of G0/G1 phase cell cycle arrest in human COLO 205 cancer cells

description: Chemical synthesis of AP-02 and AP-04. (ZIP 6 kb)
DOI: 10.6084/m9.figshare.9121487
title: Additional file 3: of Factors associated with the publicâ s trust in physicians in the context of the Lebanese healthcare system: a qualitative study

description: Contains an example of themes, subthemes and codes. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.9121487.v1
title: Additional file 3: of Factors associated with the publicâ s trust in physicians in the context of the Lebanese healthcare system: a qualitative study

description: Contains an example of themes, subthemes and codes. (XLSX 14 kb)
DOI: 10.6084/m9.figshare.9121559
title: Additional file 2: of Humanized yeast genetic interaction mapping predicts synthetic lethal interactions of FBXW7 in breast cancer

description: Table S1. Strict one-to-one ortholog mapping for yeast genes in humans. Ortholog mapping information was taken from InParanoid and filtered to identify instances where one yeast protein mapped to one human protein. The resulting 1,266 pairs of orthologs can be found in this table. (XLS 134 kb)
DOI: 10.6084/m9.figshare.9121559.v1
title: Additional file 2: of Humanized yeast genetic interaction mapping predicts synthetic lethal interactions of FBXW7 in breast cancer

description: Table S1. Strict one-to-one ortholog mapping for yeast genes in humans. Ortholog mapping information was taken from InParanoid and filtered to identify instances where one yeast protein mapped to one human protein. The resulting 1,266 pairs of orthologs can be found in this table. (XLS 134 kb)
DOI: 10.6084/m9.figshare.9121568
title: Additional file 3: of Humanized yeast genetic interaction mapping predicts synthetic lethal interactions of FBXW7 in breast cancer

description: Table S2. HYGIN network table. This table contains the initial mapping data from the yeast network where SL interactions are represented in pairs by A and B (Yeast Gene ID A, Yeast Gene ID B, Yeast Gene Name A, Yeast Gene Name B, E-value, and P-value). Through the 3-stage mapping process used to generate HYGIN, it also contains columns corresponding to Yeast Protein Accession (A and B), Human Protein Accession (A and B), and Human Gene Name (A and B). Human gene names were used to generate the network in Cytoscape. Due to some reciprocal screens in the initial yeast screen, there were some duplicate (reciprocal) entries in this table. Once the network was loaded into Cytoscape, â Remove duplicate edgesâ was used to eliminate reciprocal hits. This resulted in the 1,009 genes and 10,419 edges in the final HYGIN network. (XLS 2700 kb)
DOI: 10.6084/m9.figshare.9121571
title: Additional file 4: of Humanized yeast genetic interaction mapping predicts synthetic lethal interactions of FBXW7 in breast cancer

description: Table S3. GO Slim mapping table. Twenty-two GO Slims used for colouring the HYGIN network in Cytoscape, courtesy of the Vizeacoumar research group. The common name for the human protein and its accession number accompany the GO Slim terms that have been curated by the Vizeacoumar research group. *DDR Pathways = “DNA Damage and Repair Pathways” and NA Metabolism = “Nucleic Acid Metabolism”. (XLS 141 kb)
DOI: 10.6084/m9.figshare.9121571.v1
title: Additional file 4: of Humanized yeast genetic interaction mapping predicts synthetic lethal interactions of FBXW7 in breast cancer

description: Table S3. GO Slim mapping table. Twenty-two GO Slims used for colouring the HYGIN network in Cytoscape, courtesy of the Vizeacoumar research group. The common name for the human protein and its accession number accompany the GO Slim terms that have been curated by the Vizeacoumar research group. *DDR Pathways = “DNA Damage and Repair Pathways” and NA Metabolism = “Nucleic Acid Metabolism”. (XLS 141 kb)
DOI: 10.6084/m9.figshare.9121580
title: Additional file 5: of Humanized yeast genetic interaction mapping predicts synthetic lethal interactions of FBXW7 in breast cancer

description: Table S4. Synthetic lethal interactions in common with previous work. List of the 777 SL interactions that are in common between HYGIN and the network published by Deshpance et al. [9]. GeneA and GeneB have an SL interaction according to both networks. (XLS 100 kb)
DOI: 10.6084/m9.figshare.9121580.v1
title: Additional file 5: of Humanized yeast genetic interaction mapping predicts synthetic lethal interactions of FBXW7 in breast cancer

description: Table S4. Synthetic lethal interactions in common with previous work. List of the 777 SL interactions that are in common between HYGIN and the network published by Deshpance et al. [9]. GeneA and GeneB have an SL interaction according to both networks. (XLS 100 kb)
DOI: 10.6084/m9.figshare.9121586
title: Additional file 6: of Humanized yeast genetic interaction mapping predicts synthetic lethal interactions of FBXW7 in breast cancer

description: Table S5. List of genes that were identified as down-regulated in breast cancer at a 2-fold cut-off and with a Wilcoxon Signed Rank P-value less than 0.05. Mean expression is the average of the log2 ratio (cancer gene expression/normal gene expression) for each gene. P-values are from Wilcoxon Signed Rank test (Python) after adjustment (Benjamini-Hochberg procedure), and log10(P-values) were used to generate the volcano plot in Fig. 2a. (XLS 230 kb)
DOI: 10.6084/m9.figshare.9121586.v1
title: Additional file 6: of Humanized yeast genetic interaction mapping predicts synthetic lethal interactions of FBXW7 in breast cancer

description: Table S5. List of genes that were identified as down-regulated in breast cancer at a 2-fold cut-off and with a Wilcoxon Signed Rank P-value less than 0.05. Mean expression is the average of the log2 ratio (cancer gene expression/normal gene expression) for each gene. P-values are from Wilcoxon Signed Rank test (Python) after adjustment (Benjamini-Hochberg procedure), and log10(P-values) were used to generate the volcano plot in Fig. 2a. (XLS 230 kb)
DOI: 10.6084/m9.figshare.9121589
title: Additional file 7: of Humanized yeast genetic interaction mapping predicts synthetic lethal interactions of FBXW7 in breast cancer

description: Table S6. Genetic interactions in the breast cancer subnetwork. The table contains a list of the SL gene pairs that make up the breast cancer specific subnetwork where column GeneA represents the genes that are down-regulated in breast cancer, and column GeneB are their SL gene pairs. (XLS 66 kb)
DOI: 10.6084/m9.figshare.9121625.v1
title: Christian-tutorial-stamps2019

description: Christian-tutorial-stamps2019
DOI: 10.6084/m9.figshare.9121754.v1
title: Multitask-oriented manufacturing service composition in an uncertain environment using a hyper-heuristic algorithm

description: This is the simulation data for the article "Multitask-oriented manufacturing service composition in an uncertain environment using a hyper-heuristic algorithm"