cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.mhkb9j
title: Occurrence Download

description: A dataset containing 4380 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Grus japonensis (Statius Muller, 1776)",
 "Year 1997-2025"
 ]
}

 The dataset includes 4380 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016906-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.7489556
title: UFMTrack T-cell segmentation models and training data.

description: The training phase-contrast imaging data with manual annotations, the reference datasets for histogram normalization, as well as trained models for segmentation of T cells migrating on the pMBMEC monolayer. 
description: This work was supported by an  UniBe ID Grant to MV, BE and AA and the Microscopy Imaging Center (MIC) of the University of Bern.
DOI: 10.5281/zenodo.7489557
title: UFMTrack T-cell segmentation models and training data.

description: The training phase-contrast imaging data with manual annotations, the reference datasets for histogram normalization, as well as trained models for segmentation of T cells migrating on the pMBMEC monolayer. 
description: This work was supported by an  UniBe ID Grant to MV, BE and AA and the Microscopy Imaging Center (MIC) of the University of Bern.
DOI: 10.5281/zenodo.8144191
title: The phenology of leaf litter decomposition in aquatic and terrestrial compartments of headwater catchments: Data and code

description: The decomposition of leaf litter is a major ecological process in terrestrial and aquatic ecosystems worldwide. Leaf litter generally enters ecosystems in annual pulses and is subsequently decomposed across many seasons. Yet, investigations into this process are rarely conducted in parallel in aquatic and terrestrial ecosystems and over the full year, limiting our understanding of its phenological context across the blue-green interface. Here, we assessed the decomposition of three litter species by microorganisms and macroinvertebrates in temperate streams and forests across a year using repeated litterbag assays at six-weeks intervals. We observed higher decomposition rates in summer in most combinations of ecosystem, litter species and decomposer type, indicating positive effects of higher temperatures and low standing crops of labile litter. Further, forests showed lower decomposition rates than streams. Lastly, we found that the relative litter species effects on both microbial and invertebrate decomposition were consistent across environments, suggesting that the fast microbial activity decreased the quality of the remaining tissue mass for invertebrates. Overall, our work places known drivers of the decomposition of leaf litter into a phenological context, providing evidence that changes in the timing or strength of these drivers could drive temporal shifts of this central ecological process.
description: Funding is from the Swiss Federal Office for Environment (FOEN/BAFU), the University of Zurich Research Priority Program Global Change and Biodiversity, and the Swiss National Science Foundation (grants No. PP00P3_179089 and 310030_197410) to FA.
DOI: 10.5281/zenodo.8144192
title: The phenology of leaf litter decomposition in aquatic and terrestrial compartments of headwater catchments: Data and code

description: The decomposition of leaf litter is a major ecological process in terrestrial and aquatic ecosystems worldwide. Leaf litter generally enters ecosystems in annual pulses and is subsequently decomposed across many seasons. Yet, investigations into this process are rarely conducted in parallel in aquatic and terrestrial ecosystems and over the full year, limiting our understanding of its phenological context across the blue-green interface. Here, we assessed the decomposition of three litter species by microorganisms and macroinvertebrates in temperate streams and forests across a year using repeated litterbag assays at six-weeks intervals. We observed higher decomposition rates in summer in most combinations of ecosystem, litter species and decomposer type, indicating positive effects of higher temperatures and low standing crops of labile litter. Further, forests showed lower decomposition rates than streams. Lastly, we found that the relative litter species effects on both microbial and invertebrate decomposition were consistent across environments, suggesting that the fast microbial activity decreased the quality of the remaining tissue mass for invertebrates. Overall, our work places known drivers of the decomposition of leaf litter into a phenological context, providing evidence that changes in the timing or strength of these drivers could drive temporal shifts of this central ecological process.
description: Funding is from the Swiss Federal Office for Environment (FOEN/BAFU), the University of Zurich Research Priority Program Global Change and Biodiversity, and the Swiss National Science Foundation (grants No. PP00P3_179089 and 310030_197410) to FA.
DOI: 10.15468/dl.4btmhb
title: Occurrence Download

description: A dataset containing 86 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Netherlands",
 "Month is March",
 "TaxonKey is Castor fiber Linnaeus, 1758",
 "Year 2025-2025"
 ]
}

 The dataset includes 86 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016909-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.aa2tkz
title: Occurrence Download

description: A dataset containing 758 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "Country is Spain",
 "OccurrenceStatus is Present",
 "TaxonKey is Prunus mahaleb L."
 ]
}

 The dataset includes 758 records from 43 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016910-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8chkmz
title: Occurrence Download

description: A dataset containing 156 species occurrences available in GBIF matching the query:
{
 "and" : [
 "StateProvince is Madrid",
 "TaxonKey is Andrenidae"
 ]
}

 The dataset includes 156 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016911-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n7d779
title: Occurrence Download

description: A dataset containing 316 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Bruguiera Lam."
 ]
}

 The dataset includes 316 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016913-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r7c6rk
title: Occurrence Download

description: A dataset containing 1781 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Glycaspis brimblecombei Moore, 1964",
 "Year 1986-2025"
 ]
}

 The dataset includes 1781 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016914-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17871/atto.73.11.462
title: Isoprene canopy gradient concentration

description: Measurements performed with a quadrupole proton-transfer-reaction mass spectrometer (PTR-MS), with eight ambient air inlets, positioned from near ground to about 80m (0.05, 0.5, 4, 12, 24, 38, 53 and 79m) above the forest floor.
DOI: 10.17909/f4q0-p798
title: Data for Leonessa

description: These are the HST observations of SDSSJ1005+3722 (Leonessa)
DOI: 10.15468/dl.nzkupc
title: Occurrence Download

description: A dataset containing 2369797 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is United States of America",
 "DatasetKey is EOD – eBird Observation Dataset",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Month is January",
 "Year 2010-2011"
 ]
}

 The dataset includes 2369797 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016895-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.egs2kt
title: Occurrence Download

description: A dataset containing 27411 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Serpophaga nigricans (Vieillot, 1817)"
 ]
}

 The dataset includes 27411 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016915-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z4rbd2
title: Occurrence Download

description: A dataset containing 10882 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "TaxonKey is Achillea filipendulina Lam."
 ]
}

 The dataset includes 10882 records from 181 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016916-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28624352
title: Yao_et_al_2025_Irrigation-induced_land_water_depletion_aggravated_by_climate_change

description: This is the data set calculated and presented in the manuscript 'Irrigation-induced land water depletion aggravated by climate change'. The corresponding code could be found in https://github.com/YiYao1995/Yao_et_al_2025_Irrigation-induced_land_water_depletion_aggravated_by_climate_change.git<br>ar6_region.matgrid cells corresponding to different IPCC AR6 reference regions<br>surfdata_0.9x1.25_hist_78pfts_CMIP6_simyr1850_c201126_PFTDATA_MASK.nc and irr_diff_out.matused for masking ocean grid cells<br>surfdata_irrigation_method.ncused for getting Latitude and Longitude information of grid cells<br>Area_Equipped_For_IrrigationGrid-cell level irrigated fraction data sets<br>AREA.matgrid cell area<br>Irrigation_Water_Withdrawalirrigation water withdrawal data sets<br>Water_variablesother water fluxes calculated and used in this study
DOI: 10.15468/dl.yfe95v
title: Occurrence Download

description: A dataset containing 4876 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "OccurrenceStatus is Present",
 "TaxonKey is Spilogale Gray, 1865"
 ]
}

 The dataset includes 4876 records from 123 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016917-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v8fxhj
title: Occurrence Download

description: A dataset containing 3269 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lumnitzera racemosa Willd."
 ]
}

 The dataset includes 3269 records from 122 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016920-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j879bn
title: Occurrence Download

description: A dataset containing 362 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-4.66616 39.79303,-2.43171 39.79303,-2.43171 41.41713,-4.66616 41.41713,-4.66616 39.79303))",
 "HasGeospatialIssue is false",
 "TaxonKey is Colletidae"
 ]
}

 The dataset includes 362 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016919-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qux95f
title: Occurrence Download

description: A dataset containing 72760 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Galinsoga parviflora Cav."
 ]
}

 The dataset includes 72760 records from 976 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016890-250310093411724/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.vzm689
title: Occurrence Download

description: A dataset containing 599 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Larix gmelinii"
 ]
}

 The dataset includes 599 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004481-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k6abdb
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "and" : [
 "GadmGid is CHN.28_1",
 "TaxonKey is Pyrus communis"
 ]
}

 The dataset includes 37 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004483-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eekmfe
title: Occurrence Download

description: A dataset containing 253 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Antipathella wollastoni (Gray, 1857)"
 ]
}

 The dataset includes 253 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069441-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.suuvx4
title: Occurrence Download

description: A dataset containing 4395 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Greece",
 "TaxonKey is Actitis hypoleucos (Linnaeus, 1758)",
 "Year 1990-2023"
 ]
}

 The dataset includes 4395 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0240454-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8wgd4a
title: Occurrence Download

description: A dataset containing 888 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium anglicum Fr."
 ]
}

 The dataset includes 888 records from 31 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0242793-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ctqpph
title: Occurrence Download

description: A dataset containing 18 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Heuchera alpestris Rosend. & Lakela"
 ]
}

 The dataset includes 18 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0242275-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ujyver
title: Occurrence Download

description: A dataset containing 113 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Xylocopa suspecta Moure & Camargo, 1988"
 ]
}

 The dataset includes 113 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0069439-240506114902167/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zdyan4
title: Occurrence Download

description: A dataset containing 46958 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Quercus canariensis Willd."
 ]
}

 The dataset includes 46958 records from 93 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010894-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qxkjr8
title: Occurrence Download

description: A dataset containing 36870 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Machine Observation, Specimen)",
 "Geometry POLYGON((-81.26085 -5.43015,-79.93252 -5.39952,-80.03587 -4.5918,-80.36126 -4.5918,-80.51821 -4.59563,-81.30679 -4.60712,-81.26085 -5.43015))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "IucnRedListCategory is one of (EX, EW, CR, EN, VU, NT, LC, DD, NE)",
 "Year 2008-2023"
 ]
}

 The dataset includes 36870 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0242785-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zjabfd
title: Occurrence Download

description: A dataset containing 1579 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((17.14241 36.38339,18.88545 34.54634,45.23612 27.97932,48.61967 31.62612,50.46524 41.40707,39.49434 52.04058,22.67913 48.70743,16.21963 48.23157,13.04114 46.84734,13.45127 44.92053,18.88545 40.94403,17.14241 36.38339))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Quercus petraea (Matt.) Liebl."
 ]
}

 The dataset includes 1579 records from 68 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0031007-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ckudb6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Plantae",
 "DecimalLatitude is greater than or equal to 31.2366727115459",
 "DecimalLatitude is less than or equal to 31.2521081367189",
 "DecimalLongitude is greater than or equal to 84.9573561800718",
 "DecimalLongitude is less than or equal to 84.9753220400395",
 "BasisOfRecord is Human Observation"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0242276-230224095556074/datasets/export for details.
DOI: 10.15468/dl.esxan3
title: Occurrence Download

description: A dataset containing 11698 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Rhyticeros undulatus (Shaw, 1812)"
 ]
}

 The dataset includes 11698 records from 60 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010361-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mfn3k6
title: Occurrence Download

description: A dataset containing 390 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Suksdorfia violacea A.Gray"
 ]
}

 The dataset includes 390 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0240456-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.g4w9ws
title: Occurrence Download

description: A dataset containing 31821 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Arthropoda, Nematoda, Tardigrada, Rotifera, Annelida, Mollusca, Platyhelminthes)",
 "Geometry POLYGON ((-96.782074 39.248925, -96.79053 38.978792, -96.444497 38.971723, -96.43472 39.241788, -96.782074 39.248925))",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 },
 "Year is greater than or equal to 1900",
 {
 "not" : {
 "CoordinateUncertaintyInMeters" : [
 "is one of (301, 3036, 999, 9999)"
 ]
 }
 },
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 10000",
 "CoordinateUncertaintyInMeters is null"
 ]
 }
 ]
}

 The dataset includes 31821 records from 72 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0242270-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ye4yh9
title: Occurrence Download

description: A dataset containing 4 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hieracium angustiforme (Zahn) Nordh."
 ]
}

 The dataset includes 4 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0242802-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nnu9za
title: Occurrence Download

description: A dataset containing 8116883 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "Year 1950-2023"
 ]
}

 The dataset includes 8116883 records from 3872 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010362-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.13145/bacdive108303.20241212.9.2
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive108303.20251217.10
title: Streptomyces sp.

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.15156/bio/sh0100077.10fu
title: SH0100077.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.