cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.21227/4795-vv06
title: DR IQA Database V1

description: In practical media distribution systems, visual content usually undergoes multiple stages of quality degradation along the delivery chain, but the pristine source content is rarely available at most quality monitoring points along the chain to serve as a reference for quality assessment. As a result, full-reference (FR) and reduced-reference (RR) image quality assessment (IQA) methods are generally infeasible. Although no-reference (NR) methods are readily applicable, their performance is often not reliable. On the other hand, intermediate references of degraded quality are often available, e.g., at the input of video transcoders, but how to make the best use of them in proper ways has not been deeply investigated.This database is associated with a research project whose main goal is to make one of the first attempts to establish a new IQA paradigm named degraded-reference IQA (DR IQA). We initiate work on DR IQA by restricting ourselves to a two-stage distortion pipeline. Most IQA research projects rely on the availability of appropriate quality-annotated datasets. However, we find that only a few small-scale subject-rated datasets of multiply distorted images exist at the moment. These datasets contain a few hundreds of images and include the LIVE Multiply Distorted (LIVE MD), Multiply Distorted IVL (MD IVL), and LIVE Wild Compressed (LIVE WCmp) databases. Such small-scale data is not only insufficient to develop robust machine learning based IQA models, it is also not enough to perform multiple distortions behavior analysis, i.e., to study how multiple distortions behave in conjunction with each other when impacting visual content simultaneously. Surprisingly, such detailed analysis is lacking even for the case of two simultaneous distortions.We address the above-mentioned and other issues in our research project titled Degraded Reference Image Quality Assessment. As part of this project, we address the scarcity of data by constructing two large-scale datasets called DR IQA database Version 1 (V1) and DR IQA database Version 2 (V2). Each of these datasets contains 34 pristine reference (PR) images, 1,122 singly distorted degraded reference (DR) images, and 31,790 multiply distorted final distorted (FD) images, making them the largest datasets constructed in this particular area of IQA to-date. These datasets formed the basis of multiple distortion behavior analysis and DR IQA model development conducted in the above-mentioned project. We hope that the IQA research community will find them useful. Here we are releasing DR IQA database V1, while DR IQA database V2 has been separately released, also on IEEE DataPort. If you use this database in your research then please cite the following paper (Details about the DR IQA project can also be found in this paper):S. Athar and Z. Wang, "Degraded Reference Image Quality Assessment," Accepted for publication in IEEE Transactions on Image Processing, 2022.
DOI: 10.5066/p9q3fxqm
title: Wetland elevation and soil characteristics across Bayou Sauvage National Wildlife Refuge (2020-2021)

description: The recent completion of the US Army Corps of Engineers (USACE) Hurricane and Storm Damage Risk Reduction System (HSDRRS) for New Orleans has effectively blocked surface water exchange between Bayou Sauvage National Wildlife Refuge (BSNWR) and the surrounding Lake(s) Pontchartrain and Borgne and the Gulf of Mexico to which it was once connected. Monitoring changes in hydrology, water quality, bird habitat variability, and resident waterbird and nekton communities within BSNWR is important to the long-term sustainability of these aquatic resources for use by visitors and aquatic life in these habitats. In particular, landscape and hydrologic modifications from management and restoration projects in southeastern Louisiana have led to areas of impounded and unimpounded marshland which can greatly affect soil characteristics. Understanding the differences in soil characteristics among impounded and unimpounded areas can provide information on habitat health, structure, and function, making it crucial to assess soil responses to hydrologic management practices. Triplicate 40x10cm cores were collected at six marsh sites, three impounded and three unimpounded, in BSNWR in 2020 and 2021 to assess the variation of soil bulk density and soil organic matter between three impounded and unimpounded areas. Cores were collected at least five meters from any edge in a section of the marsh with representative local vegetation. Excessive debris on the soil surface was removed prior to coring. Elevation of sites were also determined using Real-Time Kinematics (RTK) to determine the extent of flooding and water depth of each site.
DOI: 10.5281/zenodo.7478259
title: ctenochaetus_striatus_decontamination_gx.fasta.gz

description: .
DOI: 10.5281/zenodo.7478258
title: ctenochaetus_striatus_decontamination_gx.fasta.gz

description: .
DOI: 10.5517/ccdc.csd.cc2c09l9
title: CCDC 2175040: Experimental Crystal Structure Determination

description: Related Article: Jinfeng Liu, Yuting Wu, Ge Yang, Zhe Liu, Xicheng Liu|2023|J.Inorg.Biochem.|239|112069|doi:10.1016/j.jinorgbio.2022.112069
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c292v
title: CCDC 2176946: Experimental Crystal Structure Determination

description: Related Article: Honghai Zhang, Na Yang, Jing Li, Peng Wang, Shaojie Li, Lili Xie, Saihu Liao|2022|Org.Lett.|24|8170|doi:10.1021/acs.orglett.2c03224
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c2992
title: CCDC 2176953: Experimental Crystal Structure Determination

description: Related Article: Honghai Zhang, Na Yang, Jing Li, Peng Wang, Shaojie Li, Lili Xie, Saihu Liao|2022|Org.Lett.|24|8170|doi:10.1021/acs.orglett.2c03224
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc2c5pmw
title: CCDC 2180218: Experimental Crystal Structure Determination

description: Related Article: Luel M.O. Costa, Iago De S. Reis, Christiane Fernandes, Marcelo M. Marques, Jackson A.L.C. Resende, Elizabeth H. Krenske, Gerhard Schenk, Lawrence R. Gahan, Adolfo Horn Jr|2023|J.Inorg.Biochem.|239|112064|doi:10.1016/j.jinorgbio.2022.112064
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.25919/1rp0-xa83
title: Parkes pulsar observations with undefined project IDs for 2022OCTS_09

description: Parkes pulsar observations with undefined project IDs for 2022OCTS. This collection contains observations from project IDs PX094 and PX096.
DOI: 10.5281/zenodo.6627013
title: Datasets for the paper: "Rock-matrix porosity and permeability of the hydrothermally altered, upper oceanic crust, Oman ophiolite"

description: This dataset includes all the data used for the paper submitted to the Journal of Geophysical Research: Solid Earth, entitled: <strong>Rock-matrix porosity and permeability in the hydrothermally altered, upper oceanic crust, Oman ophiolite. </strong> One excel file is provided with the following tables on separate sheets: Table 1: Sample locations, alteration types, and petrophysical analyses Table S1: Trace element Zirconium and Yttrium analysis for this study’s sample set in Figure S1 Table S2: Outcrop upscale results from image analysis Table S3: Sample bulk rock geochemistry
DOI: 10.5281/zenodo.6627012
title: Datasets for the paper: "Rock-matrix porosity and permeability of the hydrothermally altered, upper oceanic crust, Oman ophiolite"

description: This dataset includes all the data used for the paper submitted to the Journal of Geophysical Research: Solid Earth, entitled: <strong>Rock-matrix porosity and permeability in the hydrothermally altered, upper oceanic crust, Oman ophiolite. </strong> One excel file is provided with the following tables on separate sheets: Table 1: Sample locations, alteration types, and petrophysical analyses Table S1: Trace element Zirconium and Yttrium analysis for this study’s sample set in Figure S1 Table S2: Outcrop upscale results from image analysis Table S3: Sample bulk rock geochemistry
DOI: 10.5281/zenodo.7407132
title: Replication Package for: Down the River: Glyphosate Use in Agriculture and Birth Outcomes of Surrounding Populations

description: This package contains all the code necessary to reproduce the figures and tables in Dias, Rocha, and Soares (Forthcoming). “Down the River: Glyphosate Use in Agriculture and Birth Outcomes of Surrounding Populations”. Review of Economic Studies. We also provide the raw data and the codes necessary to generate the final datasets. The only raw datasets not provided are the births, mortality, and Census microdata due to their size. We provide the cleaned and aggregated data we use and indicate how to access these (and all other) datasets.
DOI: 10.5281/zenodo.7478273
title: Database review of studies on the impact of flavonoids released in nanoparticles on cytokine production.

description: This table contains the data extracted from the source of evidence to analyze the role of flavonoids encapsulated in nanoparticles in the regulation of pro-inflammatory cytokines.
DOI: 10.5281/zenodo.7478272
title: Database review of studies on the impact of flavonoids released in nanoparticles on cytokine production.

description: This table contains the data extracted from the source of evidence to analyze the role of flavonoids encapsulated in nanoparticles in the regulation of pro-inflammatory cytokines.
DOI: 10.21227/8r47-gp07
title: DR IQA Database V2

description: In practical media distribution systems, visual content usually undergoes multiple stages of quality degradation along the delivery chain, but the pristine source content is rarely available at most quality monitoring points along the chain to serve as a reference for quality assessment. As a result, full-reference (FR) and reduced-reference (RR) image quality assessment (IQA) methods are generally infeasible. Although no-reference (NR) methods are readily applicable, their performance is often not reliable. On the other hand, intermediate references of degraded quality are often available, e.g., at the input of video transcoders, but how to make the best use of them in proper ways has not been deeply investigated.This database is associated with a research project whose main goal is to make one of the first attempts to establish a new IQA paradigm named degraded-reference IQA (DR IQA). We initiate work on DR IQA by restricting ourselves to a two-stage distortion pipeline. Most IQA research projects rely on the availability of appropriate quality-annotated datasets. However, we find that only a few small-scale subject-rated datasets of multiply distorted images exist at the moment. These datasets contain a few hundreds of images and include the LIVE Multiply Distorted (LIVE MD), Multiply Distorted IVL (MD IVL), and LIVE Wild Compressed (LIVE WCmp) databases. Such small-scale data is not only insufficient to develop robust machine learning based IQA models, it is also not enough to perform multiple distortions behavior analysis, i.e., to study how multiple distortions behave in conjunction with each other when impacting visual content simultaneously. Surprisingly, such detailed analysis is lacking even for the case of two simultaneous distortions.We address the above-mentioned and other issues in our research project titled Degraded Reference Image Quality Assessment. As part of this project, we address the scarcity of data by constructing two large-scale datasets called DR IQA database Version 1 (V1) and DR IQA database Version 2 (V2). Each of these datasets contains 34 pristine reference (PR) images, 1,122 singly distorted degraded reference (DR) images, and 31,790 multiply distorted final distorted (FD) images, making them the largest datasets constructed in this particular area of IQA to-date. These datasets formed the basis of multiple distortion behavior analysis and DR IQA model development conducted in the above-mentioned project. We hope that the IQA research community will find them useful. Here we are releasing DR IQA database V2, while DR IQA database V1 has been separately released, also on IEEE DataPort. If you use this database in your research then please cite the following paper (Details about the DR IQA project can also be found in this paper):S. Athar and Z. Wang, "Degraded Reference Image Quality Assessment," Accepted for publication in IEEE Transactions on Image Processing, 2022.
DOI: 10.5281/zenodo.4298762
title: An incandescent metasurface for quasimonochromatic polarized Mid-Wave Infrared emission modulated beyond 10 MHz

description: README =============================== DESCRIPTION : This repository contains all datasets and MATLAB codes used in the following paper : Wojszvzyk, Léo, Anne Nguyen, Anne-Lise Coutrot, Cheng Zhang, Benjamin Vest, et Jean-Jacques Greffet. « An Incandescent Metasurface for Quasimonochromatic Polarized Mid-Wave Infrared Emission Modulated beyond 10 MHz ». <em>Nature Communications</em> 12, n<sup>o</sup> 1 (5 mars 2021): 1492. https://doi.org/10.1038/s41467-021-21752-w. In order to run some of the scripts, users need to download the RETICOLO library available at doi : 10.5281/zenodo.3610175 Light-in-complex-nanostrucutres/RETICOLO and subsequently add this library to their MATLAB search path. 4 folders can be found: EM_simulations: contains scripts to reproduce the electromagnetic simulations presented in the paper. The codes use functions in the RETICOLO library (therefore, please make sure that the folder containing all RETICOLO functions (RETICOLO_V8/reticolo_allege) are known to the MATLAB search path). PolarizedFreqResponse: contains raw datasets and ready-to-use analysis scripts to reproduce frequency response curves of the device presented in the paper. The main script to be run is "main.m". EmissivitySpectra: contains raw datasets and ready-to-use analysis scripts to reproduce the emissivity spectrum of the device presented in the paper. Response_to_pulse_simulation: contains raw datasets and ready-to-use analysis scripts to reproduce the pulse response of the device presented in the paper. =============================== PAPER ABSTRACT: Incandescent sources such as hot membranes and globars are widely used for mid infrared spectroscopic applications. The emission properties of these sources can be tailored by means of resonant metasurfaces: control of the spectrum, polarization and directivity has been reported. For detection or communication applications, fast temperature modulation is desirable but is still a challenge due to thermal inertia. Reducing thermal inertia can be achieved using nanoscale structures at the expense of a low absorption and emission cross section. Here, we introduce a metasurface that combines nanoscale heaters to ensure fast thermal response and nanophotonic resonances to provide large monochromatic and polarized emissivity. The metasurface is based on platinum and silicon nitride and can sustain high temperatures. We report a peak emissivity of 0.8 and an operation up to 20 MHz, six orders of magnitude faster than commercially available hot membranes.
DOI: 10.5281/zenodo.4298761
title: An incandescent metasurface for quasimonochromatic polarized Mid-Wave Infrared emission modulated beyond 10 MHz

description: README =============================== DESCRIPTION : This repository contains all datasets and MATLAB codes used in the following paper : Wojszvzyk, Léo, Anne Nguyen, Anne-Lise Coutrot, Cheng Zhang, Benjamin Vest, et Jean-Jacques Greffet. « An Incandescent Metasurface for Quasimonochromatic Polarized Mid-Wave Infrared Emission Modulated beyond 10 MHz ». <em>Nature Communications</em> 12, n<sup>o</sup> 1 (5 mars 2021): 1492. https://doi.org/10.1038/s41467-021-21752-w. In order to run some of the scripts, users need to download the RETICOLO library available at doi : 10.5281/zenodo.3610175 Light-in-complex-nanostrucutres/RETICOLO and subsequently add this library to their MATLAB search path. 4 folders can be found: EM_simulations: contains scripts to reproduce the electromagnetic simulations presented in the paper. The codes use functions in the RETICOLO library (therefore, please make sure that the folder containing all RETICOLO functions (RETICOLO_V8/reticolo_allege) are known to the MATLAB search path). PolarizedFreqResponse: contains raw datasets and ready-to-use analysis scripts to reproduce frequency response curves of the device presented in the paper. The main script to be run is "main.m". EmissivitySpectra: contains raw datasets and ready-to-use analysis scripts to reproduce the emissivity spectrum of the device presented in the paper. Response_to_pulse_simulation: contains raw datasets and ready-to-use analysis scripts to reproduce the pulse response of the device presented in the paper. =============================== PAPER ABSTRACT: Incandescent sources such as hot membranes and globars are widely used for mid infrared spectroscopic applications. The emission properties of these sources can be tailored by means of resonant metasurfaces: control of the spectrum, polarization and directivity has been reported. For detection or communication applications, fast temperature modulation is desirable but is still a challenge due to thermal inertia. Reducing thermal inertia can be achieved using nanoscale structures at the expense of a low absorption and emission cross section. Here, we introduce a metasurface that combines nanoscale heaters to ensure fast thermal response and nanophotonic resonances to provide large monochromatic and polarized emissivity. The metasurface is based on platinum and silicon nitride and can sustain high temperatures. We report a peak emissivity of 0.8 and an operation up to 20 MHz, six orders of magnitude faster than commercially available hot membranes.
DOI: 10.6084/m9.figshare.21777629
title: Data of Stream Dissolved Oxygen (DO) and Environmental Variables for the Contiguous USA.

description: Data of Stream Dissolved Oxygen (DO) and Environmental Variables for the Contiguous USA. TN, TP, Tw, Rn, SC, Q, Pa, A, I, S, WAT, BUL, OPN, VEG, AGR, and WTL, spectively, refer to total nitrogen, total phosphorous, water temperature, net solar radiation, specific conductance, discharge, atmospheric pressure, watershed drainage area, percent of imperviousness, watershed slope, open waterbody, built-up land, open land, vegetated land, agricultural land, and wetland. <br> This dataset has been used to develop a scaling law and prediction model of stream DO in the following publication: <br> Abdul-Aziz, O. I., and Gebreslase, A. K. (2023). " Emergent scaling of dissolved oxygen (DO) in freshwater streams across contiguous USA." <em>Water Resorces Research</em>, resubmitted after a minor revision.
DOI: 10.6084/m9.figshare.21777629.v1
title: Data of Stream Dissolved Oxygen (DO) and Environmental Variables for the Contiguous USA.

description: Data of Stream Dissolved Oxygen (DO) and Environmental Variables for the Contiguous USA. TN, TP, Tw, Rn, SC, Q, Pa, A, I, S, WAT, BUL, OPN, VEG, AGR, and WTL, spectively, refer to total nitrogen, total phosphorous, water temperature, net solar radiation, specific conductance, discharge, atmospheric pressure, watershed drainage area, percent of imperviousness, watershed slope, open waterbody, built-up land, open land, vegetated land, agricultural land, and wetland. <br> This dataset has been used to develop a scaling law and prediction model of stream DO in the following publication: <br> Abdul-Aziz, O. I., and Gebreslase, A. K. (2023). " Emergent scaling of dissolved oxygen (DO) in freshwater streams across contiguous USA." <em>Water Resorces Research</em>, resubmitted after a minor revision.
DOI: 10.5517/ccdc.csd.cc29gljx
title: CCDC 2129189: Experimental Crystal Structure Determination

description: Related Article: Tong Tang, Qianqian Wang, Shixuan Cao, Chang-Jiang Yang, Zhengjie He|2022|J.Org.Chem.|87|16707|doi:10.1021/acs.joc.2c02375
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc29gln1
title: CCDC 2129193: Experimental Crystal Structure Determination

description: Related Article: Tong Tang, Qianqian Wang, Shixuan Cao, Chang-Jiang Yang, Zhengjie He|2022|J.Org.Chem.|87|16707|doi:10.1021/acs.joc.2c02375
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.6084/m9.figshare.19686453.v3
title: RNA-seq Titration Results used in plotting for "Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously"

description: This data accompanies the manuscript "Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously" by Foltz, Taroni, and Greene. Please refer to our github page. <br> The file contains all data necessary to recreate the main and supplementary figures in our manuscript. <br> Abstract: Large compendia of gene expression data have proven valuable for the discovery of novel biological relationships. Historically, the majority of available RNA assays were run on microarray, while RNA-seq is now the platform of choice for many new experiments. The data structure and distributions between the platforms differ, making it challenging to combine them directly. Here we perform supervised and unsupervised machine learning evaluations to assess which existing normalization methods are best suited for combining microarray and RNA-seq data. We find that quantile and Training Distribution Matching normalization allow for supervised and unsupervised model training on microarray and RNA-seq data simultaneously. Nonparanormal normalization and z-scores are also appropriate for some applications, including pathway analysis with Pathway-Level Information Extractor (PLIER). We demonstrate that it is possible to perform effective cross-platform normalization using existing methods to combine microarray and RNA-seq data for machine learning applications.
DOI: 10.25625/c0pugc/dtsz78
title: Zinser_L._2022_Technischer Annex - Politikwandel in der Netzneutralität auf europäischer Ebene_Gro.Data.pdf

description: :unav