cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12900475.v1
title: Additional file 1 of Brain region–specific lipid alterations in the PLB4 hBACE1 knock-in mouse model of Alzheimer’s disease

description: Additional file 1: Supplementary Table S1. Summary of the lipid alterations in the PLB4 cortex, hippocampus, and hypothalamus. Lipid species listed show all the statistically significant alterations in the PLB4 brain compared to PLBWT. An unpaired, two-tailed Student’s T-test with Welch’s correction was performed using the average cpm data to determine statistically significant differences between PLBWT and PLB4 lipid species and brain regions: * p ≤ 0.05, ** p ≤ 0.01, *** p ≤ 0.001. A positive (+) percentage change denotes an increase in PLB4 compared to PLBWT, a negative (−) percentage change denotes a decrease in PLB4 compared to PLBWT. Abbreviations: cpm: counts per million, PE – phosphatidylethanolamine, PC – phosphatidylcholine, PI – phosphatidylinositol, TG – triacylglycerol, DG – diacylglycerol, PS – phosphatidylserine, Cer – ceramide, SM – sphingomyelin, PG – phosphatidylglycerol.
DOI: 10.6084/m9.figshare.12900475
title: Additional file 1 of Brain region–specific lipid alterations in the PLB4 hBACE1 knock-in mouse model of Alzheimer’s disease

description: Additional file 1: Supplementary Table S1. Summary of the lipid alterations in the PLB4 cortex, hippocampus, and hypothalamus. Lipid species listed show all the statistically significant alterations in the PLB4 brain compared to PLBWT. An unpaired, two-tailed Student’s T-test with Welch’s correction was performed using the average cpm data to determine statistically significant differences between PLBWT and PLB4 lipid species and brain regions: * p ≤ 0.05, ** p ≤ 0.01, *** p ≤ 0.001. A positive (+) percentage change denotes an increase in PLB4 compared to PLBWT, a negative (−) percentage change denotes a decrease in PLB4 compared to PLBWT. Abbreviations: cpm: counts per million, PE – phosphatidylethanolamine, PC – phosphatidylcholine, PI – phosphatidylinositol, TG – triacylglycerol, DG – diacylglycerol, PS – phosphatidylserine, Cer – ceramide, SM – sphingomyelin, PG – phosphatidylglycerol.
DOI: 10.6084/m9.figshare.12900509
title: Additional file 1 of A deep analysis using panel-based next-generation sequencing in an Ecuadorian pediatric patient with anaplastic astrocytoma: a case report

description: Additional file 1: TruSight Cancer Next-Generation Sequencing raw data.
DOI: 10.6084/m9.figshare.12900506
title: Additional file 2 of spyrmsd: symmetry-corrected RMSD calculations in Python

description: Additional file 2. Speed comparison between spyrmsd (with networkx or graph-tool) and obrms.
DOI: 10.6084/m9.figshare.12900503.v1
title: Additional file 1 of spyrmsd: symmetry-corrected RMSD calculations in Python

description: Additional file 1. Comparison of correctness between spyrmsd and obrms.
DOI: 10.6084/m9.figshare.12900506.v1
title: Additional file 2 of spyrmsd: symmetry-corrected RMSD calculations in Python

description: Additional file 2. Speed comparison between spyrmsd (with networkx or graph-tool) and obrms.
DOI: 10.6084/m9.figshare.12900503
title: Additional file 1 of spyrmsd: symmetry-corrected RMSD calculations in Python

description: Additional file 1. Comparison of correctness between spyrmsd and obrms.
DOI: 10.6084/m9.figshare.12900518
title: Additional file 3 of A deep analysis using panel-based next-generation sequencing in an Ecuadorian pediatric patient with anaplastic astrocytoma: a case report

description: Additional file 3: Nonspecific drugs for anaplastic astrocytoma.
DOI: 10.6084/m9.figshare.12900509.v1
title: Additional file 1 of A deep analysis using panel-based next-generation sequencing in an Ecuadorian pediatric patient with anaplastic astrocytoma: a case report

description: Additional file 1: TruSight Cancer Next-Generation Sequencing raw data.
DOI: 10.6084/m9.figshare.12900563.v1
title: Additional file 6 of Neural machine translation of chemical nomenclature between English and Chinese

description: Additional file 6: Manual check for translation of chemical names using different naming systems.
DOI: 10.6084/m9.figshare.12900548
title: Additional file 1 of Neural machine translation of chemical nomenclature between English and Chinese

description: Additional file 1: Training data set.
DOI: 10.6084/m9.figshare.12900548.v1
title: Additional file 1 of Neural machine translation of chemical nomenclature between English and Chinese

description: Additional file 1: Training data set.
DOI: 10.6084/m9.figshare.12900557
title: Additional file 4 of Neural machine translation of chemical nomenclature between English and Chinese

description: Additional file 4: Testing and result data set.
DOI: 10.6084/m9.figshare.12900557.v1
title: Additional file 4 of Neural machine translation of chemical nomenclature between English and Chinese

description: Additional file 4: Testing and result data set.
DOI: 10.6084/m9.figshare.12900560
title: Additional file 5 of Neural machine translation of chemical nomenclature between English and Chinese

description: Additional file 5: Manual spot check and result data set.
DOI: 10.6084/m9.figshare.12900563
title: Additional file 6 of Neural machine translation of chemical nomenclature between English and Chinese

description: Additional file 6: Manual check for translation of chemical names using different naming systems.
DOI: 10.6084/m9.figshare.12422303.v1
title: Additional file 1 of What is the research evidence for antibiotic resistance exposure and transmission to humans from the environment? A systematic map protocol

description: Additional file 1. ROSES for Systematic Map Protocols checklist.
DOI: 10.6084/m9.figshare.12422303
title: Additional file 1 of What is the research evidence for antibiotic resistance exposure and transmission to humans from the environment? A systematic map protocol

description: Additional file 1. ROSES for Systematic Map Protocols checklist.
DOI: 10.6084/m9.figshare.12900751
title: Additional file 6 of Methods of analysis of chloroplast genomes of C3, Kranz type C4 and Single Cell C4 photosynthetic members of Chenopodiaceae

description: Additional file 6: Forward and reverse primers used to amplify and validate the mitochondrion-to-plastidial DNA transfer in Haloxylon ammodendron and H. persicum.
DOI: 10.6084/m9.figshare.12900751.v1
title: Additional file 6 of Methods of analysis of chloroplast genomes of C3, Kranz type C4 and Single Cell C4 photosynthetic members of Chenopodiaceae

description: Additional file 6: Forward and reverse primers used to amplify and validate the mitochondrion-to-plastidial DNA transfer in Haloxylon ammodendron and H. persicum.
DOI: 10.6084/m9.figshare.12900775
title: Additional file 1 of Excessive unilateral proliferation of spermatogonia in a patient with non-obstructive azoospermia – adverse effect of clomiphene citrate pre-treatment?

description: Additional file 1. Supplementary material [6, 16–18, 48]
DOI: 10.6084/m9.figshare.12900775.v1
title: Additional file 1 of Excessive unilateral proliferation of spermatogonia in a patient with non-obstructive azoospermia – adverse effect of clomiphene citrate pre-treatment?

description: Additional file 1. Supplementary material [6, 16–18, 48]
DOI: 10.6084/m9.figshare.12900851.v1
title: Additional file 2 of Transcriptomic analyses of Aedes aegypti cultured cells and ex vivo midguts in response to an excess or deficiency of heme: a quest for transcriptionally-regulated heme transporters

description: Additional file 2. Table S6. Primers utilized for RT-qPCR and dsRNA production. This file includes the primer sequences for all primers utilized in the Real Time quantitative-PCR and dsRNA production described in this paper.
DOI: 10.6084/m9.figshare.12900851
title: Additional file 2 of Transcriptomic analyses of Aedes aegypti cultured cells and ex vivo midguts in response to an excess or deficiency of heme: a quest for transcriptionally-regulated heme transporters

description: Additional file 2. Table S6. Primers utilized for RT-qPCR and dsRNA production. This file includes the primer sequences for all primers utilized in the Real Time quantitative-PCR and dsRNA production described in this paper.
DOI: 10.6084/m9.figshare.12900848
title: Additional file 1 of Transcriptomic analyses of Aedes aegypti cultured cells and ex vivo midguts in response to an excess or deficiency of heme: a quest for transcriptionally-regulated heme transporters

description: Additional file 1 RNA-seq_Supplement_tables. Table S1-S5: All RNA-seq transcriptomic analyses for all conditions examined. This file includes the full spreadsheet for the differential expression and soft cluster analyses of all genes examined. Table S1. Aag2 cells exposed to 10 μM Heme or 0 μM Heme in Schneider’s Drosophila growth media for 72-h. Table S2: Aag2 cells exposed to 20 μM Heme for 48-h. Table S3: A20 cells exposed to 10 μM Heme or 0 μM Heme for 72-h. Table S4: Aag2 cells exposed to 10 μM Heme or 0 μM Heme in Leibovitz’s L-15 growth media for 72-h. Table S5: Ae. aegypti midguts exposed to 10 μM Heme or 0 μM Heme in Schneider’s Drosophila growth media for 35-h.
DOI: 10.6084/m9.figshare.12900860
title: Additional file 5 of Transcriptomic analyses of Aedes aegypti cultured cells and ex vivo midguts in response to an excess or deficiency of heme: a quest for transcriptionally-regulated heme transporters

description: Additional file 5 Supplemental code file. This file contains an example set of Linux commands used to perform random sampling of Ae. aegypti genome for genes encoding proteins with transmembrane domain predictions
DOI: 10.6084/m9.figshare.12900848.v1
title: Additional file 1 of Transcriptomic analyses of Aedes aegypti cultured cells and ex vivo midguts in response to an excess or deficiency of heme: a quest for transcriptionally-regulated heme transporters

description: Additional file 1 RNA-seq_Supplement_tables. Table S1-S5: All RNA-seq transcriptomic analyses for all conditions examined. This file includes the full spreadsheet for the differential expression and soft cluster analyses of all genes examined. Table S1. Aag2 cells exposed to 10 μM Heme or 0 μM Heme in Schneider’s Drosophila growth media for 72-h. Table S2: Aag2 cells exposed to 20 μM Heme for 48-h. Table S3: A20 cells exposed to 10 μM Heme or 0 μM Heme for 72-h. Table S4: Aag2 cells exposed to 10 μM Heme or 0 μM Heme in Leibovitz’s L-15 growth media for 72-h. Table S5: Ae. aegypti midguts exposed to 10 μM Heme or 0 μM Heme in Schneider’s Drosophila growth media for 35-h.
DOI: 10.6084/m9.figshare.12900860.v1
title: Additional file 5 of Transcriptomic analyses of Aedes aegypti cultured cells and ex vivo midguts in response to an excess or deficiency of heme: a quest for transcriptionally-regulated heme transporters

description: Additional file 5 Supplemental code file. This file contains an example set of Linux commands used to perform random sampling of Ae. aegypti genome for genes encoding proteins with transmembrane domain predictions
DOI: 10.6084/m9.figshare.12900515
title: Additional file 2 of A deep analysis using panel-based next-generation sequencing in an Ecuadorian pediatric patient with anaplastic astrocytoma: a case report

description: Additional file 2: Supplementary Table 2. g:Profiler heat map.
DOI: 10.6084/m9.figshare.12900515.v1
title: Additional file 2 of A deep analysis using panel-based next-generation sequencing in an Ecuadorian pediatric patient with anaplastic astrocytoma: a case report

description: Additional file 2: Supplementary Table 2. g:Profiler heat map.
DOI: 10.6084/m9.figshare.12900518.v1
title: Additional file 3 of A deep analysis using panel-based next-generation sequencing in an Ecuadorian pediatric patient with anaplastic astrocytoma: a case report

description: Additional file 3: Nonspecific drugs for anaplastic astrocytoma.
DOI: 10.5281/zenodo.4009955
title: MoMA Collection - Automatic Monthly Update

description: Temporary Description
DOI: 10.5281/zenodo.4009954
title: MoMA Collection - Automatic Monthly Update

description: Temporary Description
DOI: 10.6084/m9.figshare.12899960.v2
title: Exenatide, metformin, or both for prediabetes in PCOS: A randomized, open-labeled, parallel-group controlled study

description: <b>supplemental table1 and table2</b>
DOI: 10.5281/zenodo.4007065
title: Results of Neuron Phenotype Ontology competency queries

description: Full list of neurons with human readable labels returned from competency queries against the Neuron Phenotype Ontology as described in Gillespie et al. (2020). Three .CSV files are included with the number of competency query (Q1, Q2 and Q3) appended. The DL query used for the query is given in the column header of column A. The numbers provided for Q1 and Q2 in columns B-E represent the count of neurons returned for each of the 3 evidence based models (EBMs) described in the paper and the Common Usage Types (CUTs) The total number of neurons returned across all categories is shown in column F.
description: An archive of the ontology and associated code is available at:https://doi.org/10.5281/zenodo.4005727
DOI: 10.5281/zenodo.4007064
title: Results of Neuron Phenotype Ontology competency queries

description: Full list of neurons with human readable labels returned from competency queries against the Neuron Phenotype Ontology as described in Gillespie et al. (2020). Three .CSV files are included with the number of competency query (Q1, Q2 and Q3) appended. The DL query used for the query is given in the column header of column A. The numbers provided for Q1 and Q2 in columns B-E represent the count of neurons returned for each of the 3 evidence based models (EBMs) described in the paper and the Common Usage Types (CUTs) The total number of neurons returned across all categories is shown in column F.
description: An archive of the ontology and associated code is available at:https://doi.org/10.5281/zenodo.4005727
DOI: 10.26186/135334
title: Cape Darnley Bathymetry Grid v.1

description: A new high-resolution (100 m) bathymetric compilation of the Cape Darnley region in East Antarctica
DOI: 10.21227/t7nk-g916
title: B-spline Fourier dataset

description: Dataset for journal manuscript titled: 'Cardiac Motion Estimation from Noisy Medical Images: A Regularisation Framework Applied on Pairwise Image Registration Displacement Fields'
DOI: 10.7303/syn22317078
title: SRPBS Multi-disorder Connectivity Dataset
DOI: 10.7303/syn22317079
title: SRPBS Multi-disorder MRI Dataset (restricted)
DOI: 10.7303/syn22317081
title: SRPBS Multi-disorder MRI Dataset (unrestricted)
DOI: 10.7303/syn22317082
title: SRPBS Traveling Subject MRI Dataset
DOI: 10.6084/m9.figshare.12899903
title: Data related to Figure S3

description: Refractive index measured using a refractometer at 22.5˚C and at 589 nm wavelength.
DOI: 10.6084/m9.figshare.12899903.v1
title: Data related to Figure S3

description: Refractive index measured using a refractometer at 22.5˚C and at 589 nm wavelength.
DOI: 10.25345/c5645n
title: MassIVE MSV000086049 - Evaluating the performance of 193 nm ultraviolet photodissociaiton (UVPD) for tandem mass tag (TMT) labeled peptides
title: We evaluated 193 nm UVPD for characterization of TMT labeled peptides (HeLa digest) and N-glycopeptides (alpha-1-acid glycoprotein digest) at different conditions, and compared the results with HCD. Samples were digested with trypsin and labeled with TMT6. Instrument data files were searched with either MS-GF+ (using PNNL's DMS processing pipeline) or with Byonic.
DOI: 10.6084/m9.figshare.12593315
title: Data for "Media framing of spiders may exacerbate arachnophobic sentiments"

description: Dataset used for the analysis of the paper:<br>Mammola, S., Nanni, V., Pantini, P., & Isaia, M. (2020). Media framing of spiders may exacerbate arachnophobic sentiments. <i>People and Nature </i>https://doi.org/10.1002/pan3.10143<br><i><br></i>An excel (.xlsx) and a tab-delimited (.csv) version of the database are both provided. The columns are:<br>a) Link to the article (url). All accessed between January and March 2020;<br>b) News ID, the identifier for each media report was obtained (“Event_ID”), by combining location and year of the event (e.g., “Terni_2018”);d) journal name; <br>e) journal circulation (‘Regional’ or ‘National”);f–h) Date of publication – day (d), month (m), year (y);i) Title; j) spider species as it was mentioned in the media report (even if the species attribution was incorrect based on indirect evidence),k) year of the event;l) location of the event;<br>m–n) coordinates of the location, in WGS84 decimal degrees;<br>o–p) type of event (“encounter”, “bite”, or “deadly bite”) ;q) presence/absence of photographs of the spider; r) presence/absence of photographs of the bite; s–v) assessment of sensationalism by three authors (SM, VP, MI) and consensus;w) possible mention of an expert-opinion (doctor, arachnologist, or general biologist);x–ab) Classification of errors;ac) number of total share of facebook;ad) notes.<br>See main text for more details.
DOI: 10.6084/m9.figshare.12593315.v1
title: Data for "Media framing of spiders may exacerbate arachnophobic sentiments"

description: Dataset used for the analysis of the paper:<br>Mammola, S., Nanni, V., Pantini, P., & Isaia, M. (2020). Media framing of spiders may exacerbate arachnophobic sentiments. <i>People and Nature </i>https://doi.org/10.1002/pan3.10143<br><i><br></i>An excel (.xlsx) and a tab-delimited (.csv) version of the database are both provided. The columns are:<br>a) Link to the article (url). All accessed between January and March 2020;<br>b) News ID, the identifier for each media report was obtained (“Event_ID”), by combining location and year of the event (e.g., “Terni_2018”);d) journal name; <br>e) journal circulation (‘Regional’ or ‘National”);f–h) Date of publication – day (d), month (m), year (y);i) Title; j) spider species as it was mentioned in the media report (even if the species attribution was incorrect based on indirect evidence),k) year of the event;l) location of the event;<br>m–n) coordinates of the location, in WGS84 decimal degrees;<br>o–p) type of event (“encounter”, “bite”, or “deadly bite”) ;q) presence/absence of photographs of the spider; r) presence/absence of photographs of the bite; s–v) assessment of sensationalism by three authors (SM, VP, MI) and consensus;w) possible mention of an expert-opinion (doctor, arachnologist, or general biologist);x–ab) Classification of errors;ac) number of total share of facebook;ad) notes.<br>See main text for more details.
DOI: 10.17632/6xvh4my8mx.1
title: Anthropometry and morphometry of fetuses and newborns

description: Anthropometric and morphometric data for calculating reference values. Data is collected in a mixed population of Caucasoids and Asians.
DOI: 10.5519/qd.u68w5hv3
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.5519/qd.t2sk0k0x
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1 records)
DOI: 10.17632/jd8x9xxzwn.1
title: Structural basis of tail-anchored membrane protein biogenesis by the GET insertase complex. McDowell et al
DOI: 10.5281/zenodo.4009936
title: Dataset for Seismic Characteristics on the Free-fall Impact and Fragmentation Process of Rock Block

description: This dataset consists of all data used in the manuscript of "Seismic Characteristics on the Free-fall Impact and Fragmentation Process of Rock Block".
DOI: 10.6084/m9.figshare.5766819
title: Interview - Gordon Bell

description: This dataset 'Interview - Gordon Bell’ is a component of a Doctor Of Philosophy conducted by candidate Alexander Hayes (3919493) titled 'The Socioethical Implications Of Body Worn Computers: An Ethnographic Study'. This research was conducted in the Faculty of Engineering and Information Systems, School of Computing and Information Technology (SCIT), University of Wollongong with research strength Innovation in Business & Social Research under Principal Supervisor Professor Katina Michael (University of Wollongong) and Associate Supervisor Dr Teemu Leinonen (Aalto University Finland). This thesis explores the socioethical implications of body worn computers (BWC) using an ethnographic approach. Furthermore, a subset, body worn cameras (BWCs), combines data with value added constancy through Location Based Services (LBS) over wireless network connections. The aim of this investigation was to engage global leaders from transdisciplinary stakeholder groups in semi-structured interviews, conversations and events, situating a review of the social impact and ethical implications of BWCs. A critical discourse analysis using a Foucauldian approach reveals power relations, which are then infused through narrative with unique intercultural perspectives, differentiating ‘location’ from ‘place’. The author of this study has subsequently identified through Grounded Theory that BWCs are causal agency for disconnect from proper culture which can be addressed through the application of Ngikalikarra, a unique framework for empathetic understanding of place and community engagement. The full thesis can be accessed at https://ro.uow.edu.au/theses1/853
DOI: 10.6084/m9.figshare.5766819.v1
title: Interview - Gordon Bell

description: This dataset 'Interview - Gordon Bell’ is a component of a Doctor Of Philosophy conducted by candidate Alexander Hayes (3919493) titled 'The Socioethical Implications Of Body Worn Computers: An Ethnographic Study'. This research was conducted in the Faculty of Engineering and Information Systems, School of Computing and Information Technology (SCIT), University of Wollongong with research strength Innovation in Business & Social Research under Principal Supervisor Professor Katina Michael (University of Wollongong) and Associate Supervisor Dr Teemu Leinonen (Aalto University Finland). This thesis explores the socioethical implications of body worn computers (BWC) using an ethnographic approach. Furthermore, a subset, body worn cameras (BWCs), combines data with value added constancy through Location Based Services (LBS) over wireless network connections. The aim of this investigation was to engage global leaders from transdisciplinary stakeholder groups in semi-structured interviews, conversations and events, situating a review of the social impact and ethical implications of BWCs. A critical discourse analysis using a Foucauldian approach reveals power relations, which are then infused through narrative with unique intercultural perspectives, differentiating ‘location’ from ‘place’. The author of this study has subsequently identified through Grounded Theory that BWCs are causal agency for disconnect from proper culture which can be addressed through the application of Ngikalikarra, a unique framework for empathetic understanding of place and community engagement. The full thesis can be accessed at https://ro.uow.edu.au/theses1/853
DOI: 10.6084/m9.figshare.12746315
title: Dataset_Bories et al.xlsx

description: Minimal dataset used for the manuscript entitled "Impact of <i>TP53</i> mutations in acute myeloid leukemia patients treated with azacitidine", Bories et al
DOI: 10.6084/m9.figshare.12746315.v2
title: Dataset_Bories et al.xlsx

description: Minimal dataset used for the manuscript entitled "Impact of <i>TP53</i> mutations in acute myeloid leukemia patients treated with azacitidine", Bories et al
DOI: 10.6084/m9.figshare.12746315.v1
title: Dataset_Bories et al.xlsx

description: Minimal dataset used for the manuscript entitled "Impact of <i>TP53</i> mutations in acute myeloid leukemia patients treated with azacitidine", Bories et al
DOI: 10.6084/m9.figshare.12866744
title: Reconstructing the electrical structure of dust storms from locally observed electric field data

description: This is the dataset used in Zhang, H. and Zhou, Y. H.<br>Reconstructing the electrical structure of dust storms from locally observed electric field data. Nature Communications.<br>CSV files contain the raw electric field data for each dust storm. The names of these CSV files refer to the observed dust storms described in the paper. Each CSV file includes the raw electric field data for the components s1-s19 described in the paper.<br>