cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.ut6bmh
title: Occurrence Download

description: A dataset containing 2387 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE",
 "TaxonKey is Muntiacus vaginalis",
 "Year is greater than or equal to 2010",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 2387 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018310-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ssvx4z
title: Occurrence Download

description: A dataset containing 71 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anopheles hodgkini"
 ]
}

 The dataset includes 71 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018313-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xq859c
title: Occurrence Download

description: A dataset containing 10919 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Alternanthera sessilis",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 10919 records from 377 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018314-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18642150
title: Everything you needed to know about mangroves*(*but were afraid to ask)

description: Python scripts and dataset that were used to produce the figure 2 and 3 of the research paper.
DOI: 10.15468/dl.x7bpx4
title: Occurrence Download

description: A dataset containing 307 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holmskioldia sanguinea",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 307 records from 90 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018316-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18642101
title: Reproducible scRNA-seq PBMC Workflow: Reference, Toy Demonstration Data, and Analysis Outputs

description: This record contains a fully reproducible, containerized single-cell RNA-seq workflow for PBMC data analysis.

The workflow implements:





FASTQ quality control




STARsolo alignment




Seurat-based QC, normalization, clustering, and annotation




Pseudobulk differential expression and TOST equivalence testing




Cell-type–specific co-expression network construction



Version 1 provides a lightweight demonstration bundle including:





A chromosome 1 (chr1) GRCh38 mini-reference




A pre-built STAR index for chr1




A reduced FASTQ subset (~100k reads) for rapid execution



This demonstration dataset is designed to run in 5–10 minutes on a standard workstation and illustrates full pipeline functionality without requiring large memory resources.

Future versions of this record will include the full GRCh38 reference, complete STAR index, and full-scale analysis outputs.
DOI: 10.15468/dl.sghha8
title: Occurrence Download

description: A dataset containing 2387 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is TRUE",
 "HasGeospatialIssue is FALSE",
 "TaxonKey is Muntiacus muntjak vaginalis",
 "Year is greater than or equal to 2010",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 2387 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018317-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18642219
title: LINF_330017800

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.5281/zenodo.18642220
title: LINF_330017800

description: Protein of unknown function - conserved; Leishmania infantum (strain JPCM5)
DOI: 10.15468/dl.7wvtzy
title: Occurrence Download

description: A dataset containing 1451 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hoslundia opposita",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 1451 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018321-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9wqhuc
title: Occurrence Download

description: A dataset containing 11296 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Clitoria ternatea",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 11296 records from 258 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018320-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18642055
title: HCC_object
DOI: 10.5281/zenodo.18642056
title: HCC_object
DOI: 10.5281/zenodo.15501623
title: Spectral decomposition reveals surface processes on Europa: Supplementary Files

description: This depository contains data and plots related to the study, titled "Spectral decomposition reveals surface processes on Europa". It contains:

 



Reduced NIRSpec-IFU data cube of Europa's leading hemisphere (F100LP/G140H, F290LP/G395H). The reduction was performed by us using JWST Giant Planets reduction pipeline. Freely available at

Reduced NIRSpec-IFU data cube of GSPC P330-E, which is the star we used for calibration. It was reduced using the same pipeline.

.fits files containing the zeroth- and first- order spatial and spectral modes of the seven spectral bands analyzed in the study.

Figures depicting the fitting of the zeroth- and first- principal spatial modes using spherical harmonic basis, and its results. For H2O2, we include a plot depicting band-area analysis to demonstrate correspondence with previous results.

Figures illustrating continuum removal at key spaxels, for all bands where this procedure was applied.

A .csv table containing best-fit spherical harmonic mode coefficients for each band, and their band-wise uncertainties.
DOI: 10.5281/zenodo.15374427
title: Spectral decomposition reveals surface processes on Europa: Supplementary Files

description: This depository contains data and plots related to the study, titled "Spectral decomposition reveals surface processes on Europa". It contains:

 



Reduced NIRSpec-IFU data cube of Europa's leading hemisphere (F100LP/G140H, F290LP/G395H). The reduction was performed by us using JWST Giant Planets reduction pipeline. Freely available at

Reduced NIRSpec-IFU data cube of GSPC P330-E, which is the star we used for calibration. It was reduced using the same pipeline.

.fits files containing the zeroth- and first- order spatial and spectral modes of the seven spectral bands analyzed in the study.

Figures depicting the fitting of the zeroth- and first- principal spatial modes using spherical harmonic basis, and its results. For H2O2, we include a plot depicting band-area analysis to demonstrate correspondence with previous results.

Figures illustrating continuum removal at key spaxels, for all bands where this procedure was applied.

A .csv table containing best-fit spherical harmonic mode coefficients for each band, and their band-wise uncertainties.
DOI: 10.15468/dl.xmuyf5
title: Occurrence Download

description: A dataset containing 57 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hymenopyramis brachiata",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 57 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018323-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ybjvwh
title: Occurrence Download

description: A dataset containing 591 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Desmodium scorpiurus",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 591 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018324-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y6fg8r
title: Occurrence Download

description: A dataset containing 72 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Anopheles insulaeflorum"
 ]
}

 The dataset includes 72 records from 8 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018326-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6teuu7
title: Occurrence Download

description: A dataset containing 698 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Hypenia salzmannii",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 698 records from 66 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018327-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18036537
title: MSS-CT-3 (Val + Test)
DOI: 10.5281/zenodo.18036536
title: MSS-CT-3 (Val + Test)
DOI: 10.15468/dl.chntnf
title: Occurrence Download

description: A dataset containing 11591 species occurrences available in GBIF matching the query:
{
 "and" : [
 "CoordinateUncertaintyInMeters 0.0-1000.0",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Carex brizoides"
 ]
}

 The dataset includes 11591 records from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018329-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6e2bba
title: Occurrence Download

description: A dataset containing 10768 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Macroptilium atropurpureum",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is Fossil"
 ]
 }
 }
 ]
}

 The dataset includes 10768 records from 322 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018330-260208012135463/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nkak3d
title: Occurrence Download

description: A dataset containing 224 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is China",
 "TaxonKey is Ceratopteris Brongn."
 ]
}

 The dataset includes 224 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006986-250415084134356/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id398168.1
title: StrainInfo SI-ID 398168.1

description: StrainInfo dataset 398168 about a strain of Agromyces. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398169.1
title: StrainInfo SI-ID 398169.1

description: StrainInfo dataset 398169 about a strain of Actinopolyspora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398170.1
title: StrainInfo SI-ID 398170.1

description: StrainInfo dataset 398170 about a strain of Pseudomonas haemolytica. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398171.1
title: StrainInfo SI-ID 398171.1

description: StrainInfo dataset 398171 about a strain of Salmonella enterica subsp. enterica. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397996.1
title: StrainInfo SI-ID 397996.1

description: StrainInfo dataset 397996 about a strain of Bacteroides fragilis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397997.1
title: StrainInfo SI-ID 397997.1

description: StrainInfo dataset 397997 about a strain of Parvimonas. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397998.1
title: StrainInfo SI-ID 397998.1

description: StrainInfo dataset 397998 about a strain of Aurantimonas endophytica. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.b4zedy
title: Occurrence Download

description: A dataset containing 106377 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Tadorna tadornoides (Jardine & Selby, 1828)"
 ]
}

 The dataset includes 106377 records from 78 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000023-171002173027117/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.enrtl3
title: Occurrence Download

description: A dataset containing 10609 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Ortalis cinereiceps G.R.Gray, 1867",
 "TaxonKey is Ortalis cinereiceps cinereiceps",
 "TaxonKey is Ortalis cinereiceps saturatus"
 ]
}

 The dataset includes 10609 records from 27 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002289-170925132151566/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id398095.1
title: StrainInfo SI-ID 398095.1

description: StrainInfo dataset 398095 about a strain of Deinococcus yunweiensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398096.1
title: StrainInfo SI-ID 398096.1

description: StrainInfo dataset 398096 about a strain of Nocardia rhizosphaerae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.by3sef
title: Occurrence Download

description: A dataset containing 3734 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Eclectus roratus (Statius Muller, 1776)",
 "TaxonKey is Eclectus roratus polychloros (Scopoli, 1786)",
 "TaxonKey is Eclectus roratus roratus",
 "TaxonKey is Eclectus roratus cornelia Bonaparte, 1850",
 "TaxonKey is Eclectus roratus vosmaeri (Rothschild, 1922)",
 "TaxonKey is Eclectus roratus solomonensis Rothschild & Hartert, 1901",
 "TaxonKey is Eclectus roratus aruensis G.R.Gray, 1858",
 "TaxonKey is Eclectus roratus macgillivrayi Mathews, 1913",
 "TaxonKey is Eclectus roratus riedeli A.B.Meyer, 1882",
 "TaxonKey is Eclectus roratus biaki (Hartert, 1932)"
 ]
}

 The dataset includes 3734 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0000667-170925132151566/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id398097.1
title: StrainInfo SI-ID 398097.1

description: StrainInfo dataset 398097 about a strain of Micrococcus luteus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398172.1
title: StrainInfo SI-ID 398172.1

description: StrainInfo dataset 398172 about a strain of Collinsella aerofaciens. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398173.1
title: StrainInfo SI-ID 398173.1

description: StrainInfo dataset 398173 about a strain of Clavispora lusitaniae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398174.1
title: StrainInfo SI-ID 398174.1

description: StrainInfo dataset 398174 about a strain of Unidentified. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id397999.1
title: StrainInfo SI-ID 397999.1

description: StrainInfo dataset 397999 about a strain of Kribbella amoyensis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398000.1
title: StrainInfo SI-ID 398000.1

description: StrainInfo dataset 398000 about a strain of Thiospirochaeta perfilievii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398001.1
title: StrainInfo SI-ID 398001.1

description: StrainInfo dataset 398001 about a strain of Dictyoglomus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398098.1
title: StrainInfo SI-ID 398098.1

description: StrainInfo dataset 398098 about a strain of Bacillus licheniformis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398099.1
title: StrainInfo SI-ID 398099.1

description: StrainInfo dataset 398099 about a strain of Bacillus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.fmlyen
title: Occurrence Download

description: A dataset containing 222 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Hypsipetes crassirostris E.Newton, 1867"
 ]
}

 The dataset includes 222 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002018-170925132151566/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id398100.1
title: StrainInfo SI-ID 398100.1

description: StrainInfo dataset 398100 about a strain of Methylobacterium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398101.1
title: StrainInfo SI-ID 398101.1

description: StrainInfo dataset 398101 about a strain of Aureimonas phyllosphaerae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.15468/dl.29m9ju
title: Occurrence Download

description: A dataset containing 361594 species occurrences available in GBIF matching the query:
{
 "or" : [
 "TaxonKey is Platycercus elegans (Gmelin, 1788)",
 "TaxonKey is Platycercus elegans flaveolus Gould, 1837",
 "TaxonKey is Platycercus elegans melanopterus North, 1906",
 "TaxonKey is Platycercus elegans adelaidae Gould, 1840",
 "TaxonKey is Platycercus elegans nigrescens E.P.Ramsay, 1888",
 "TaxonKey is Platycercus elegans elegans",
 "TaxonKey is Platycercus elegans filewoodi McAllan & Bruce, 1989",
 "TaxonKey is Platycercus elegans subadelaidae Mathews, 1912",
 "TaxonKey is Platycercus elegans adelaidiae",
 "TaxonKey is Platycercus elegans fleurieuensis Ashby, 1917"
 ]
}

 The dataset includes 361594 records from 111 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002998-170925132151566/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nrrvfg
title: Occurrence Download

description: A dataset containing 3979 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cornus controversa Hemsl."
 ]
}

 The dataset includes 3979 records from 130 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0006364-200127171203522/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id398175.1
title: StrainInfo SI-ID 398175.1

description: StrainInfo dataset 398175 about a strain of Escherichia coli. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.
DOI: 10.60712/si-id398176.1
title: StrainInfo SI-ID 398176.1

description: StrainInfo dataset 398176 about a strain of Stenotrophomonas maltophilia. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.