cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25326/3xrf-4f68
title: 3-methyl-3-penten-2-one + OH - Gas-phase oxidation - product study - 2021-07-12

description: Publication of the dataset
DOI: 10.6084/m9.figshare.29087063
title: Supplementary_material

description: Generated HMMs used for MazZ-2 and Ndt-like mining.Fasta of protein sequences used to build phylogenetic trees.
DOI: 10.25326/3aw1-en73
title: methyl methacrylate + O3

description: Publication of the dataset
DOI: 10.25326/74hb-tp37
title: methyl methacrylate + O3

description: Publication of the dataset
DOI: 10.25326/0m5b-4a43
title: methyl crotonate + O3

description: Publication of the dataset
DOI: 10.15468/dl.u4buan
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holtbyrnia macrops Maul, 1957",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((8.9648 28.8496,-0.0352 28.8496,-0.0352 19.8496,8.9648 19.8496,8.9648 28.8496))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010136-250525065834625/datasets/export for details.
DOI: 10.15468/dl.xv9ebg
title: Occurrence Download

description: A dataset containing 203 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Distribución geográfica y ecológica potencial de las cícadas de México"
 ]
}

 The dataset includes 203 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010137-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.nv36qb
title: Occurrence Download

description: A dataset containing 269 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Cheirodon interruptus)",
 "BasisOfRecord is one of (Specimen, Literature Occurrence, Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1991",
 "Year is less than or equal to 2025"
 ]
}

 The dataset includes 269 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0024822-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/13734256
title: Daftar Pengadilan Indonesia
DOI: 10.5281/zenodo.17592453
title: Synthetic dataset of FASTQ files used to benchmark the rnaends R package performances

description: Synthetic dataset of FASTQ files used to benchmark the rnaends R package performances.

The rnaends package is available at https://gitlab.com/rnaends/rnaends

 

FASTQ files with variable sequencing depths (1 to 20 millions of reads per experimental condition) were generated based on observed distributions of 5’ ends in two conditions (5’PPP only RNAs vs. background noise as in the TSS-EMOTE protocol) to evaluate the performances of different features of the rnaends package:





pre-processing of raw reads





only validate then extract the mappable part of reads.




checking the presence and validity of some sequences, i.e. a recognition sequence (CGGCACCAACCGAGG) and a control sequence (CGC) at precise locations on the reads (see the read structure below for details).




checking the validity of UMIs and extracting them for further use for PCR duplicates removal.




using barcodes for demultiplexing experimental conditions.






quantification





mapping




count table






downstream





TSS





100 nucleotide long reads were generated.

UMIs are 17 nucleotides long and are composed of only A, C and G.

12 barcodes were used corresponding to two experimental conditions with 3 or 6 replicates depending on the fact that the first 2 or 3 nucleotides of the barcodes are used:





AAxx, ACxx, ATxx for 3 replicates of the 5’PPP RNAs condition, and AAAx, AACx, ACAx, ACCx, ATAx, ATCx for the 6 replicates




CAxx, CCxx, CTxx for the 3 replicates of the background noise condition, and CAAx, CACx, CCAx, CCCx, CTAx, CTCx for the 6 replicates.



As a result, benchmarks for 12 barcodes process 12 times 1-5-10-15-20 million reads per barcode/condition, and benchmarks with 6 barcodes process 2-10-20-30-40 million reads per barcode/condition. Thus, the biggest analysis presented here (6 barcodes with 20 millions reads per condition), consists in 240 million reads.
DOI: 10.5281/zenodo.17592454
title: Synthetic dataset of FASTQ files used to benchmark the rnaends R package performances

description: Synthetic dataset of FASTQ files used to benchmark the rnaends R package performances.

The rnaends package is available at https://gitlab.com/rnaends/rnaends

 

FASTQ files with variable sequencing depths (1 to 20 millions of reads per experimental condition) were generated based on observed distributions of 5’ ends in two conditions (5’PPP only RNAs vs. background noise as in the TSS-EMOTE protocol) to evaluate the performances of different features of the rnaends package:





pre-processing of raw reads





only validate then extract the mappable part of reads.




checking the presence and validity of some sequences, i.e. a recognition sequence (CGGCACCAACCGAGG) and a control sequence (CGC) at precise locations on the reads (see the read structure below for details).




checking the validity of UMIs and extracting them for further use for PCR duplicates removal.




using barcodes for demultiplexing experimental conditions.






quantification





mapping




count table






downstream





TSS





100 nucleotide long reads were generated.

UMIs are 17 nucleotides long and are composed of only A, C and G.

12 barcodes were used corresponding to two experimental conditions with 3 or 6 replicates depending on the fact that the first 2 or 3 nucleotides of the barcodes are used:





AAxx, ACxx, ATxx for 3 replicates of the 5’PPP RNAs condition, and AAAx, AACx, ACAx, ACCx, ATAx, ATCx for the 6 replicates




CAxx, CCxx, CTxx for the 3 replicates of the background noise condition, and CAAx, CACx, CCAx, CCCx, CTAx, CTCx for the 6 replicates.



As a result, benchmarks for 12 barcodes process 12 times 1-5-10-15-20 million reads per barcode/condition, and benchmarks with 6 barcodes process 2-10-20-30-40 million reads per barcode/condition. Thus, the biggest analysis presented here (6 barcodes with 20 millions reads per condition), consists in 240 million reads.
DOI: 10.15468/dl.ky5k6u
title: Occurrence Download

description: A dataset containing 1676 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-72.47074 42.07067,-72.47074 42.16125,-72.62069 42.16125,-72.62069 42.07067,-72.47074 42.07067))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Magnoliopsida"
 ]
}

 The dataset includes 1676 records from 32 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033585-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.2905/b9fb9e67-78a9-4327-9d59-39a928d812d3
title: EuroCropsV2

description: EurCropsV2 provides a harmonized, multiannual collection of parcel-level crop declarations (Geo-Spatial Application, GSA) from 12 EU Member States. The dataset integrates publicly available data from national paying agencies covering at least three years per country, totaling nearly 47 million agricultural parcels across 21 million hectares. Each record includes crop type, parcel geometry, and metadata harmonized using the Hierarchical Crop and Agriculture Taxonomy (HCAT v4). The dataset enables comparative spatiotemporal analyses across the EU, supports Common Agricultural Policy (CAP) monitoring, and facilitates interoperability with other EU agricultural datasets such as LUCAS, IFS/FSS, FADN, EUCropMap, and the Copernicus HRL Crop Types layer.
DOI: 10.5281/zenodo.17611369
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS251114q Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS251114q Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.5281/zenodo.17611368
title: Submitted Galaxy Scores to the Gravitational Wave Treasure Map for event MS251114q Preliminary

description: Attached in a .json file is the ranked galaxy information within the contour region of the EM counterpart search associated with the gravitational wave event MS251114q Preliminary. A reference to these calculations can be found here: https://ui.adsabs.harvard.edu/abs/2017ApJ...848L..33A/abstract
DOI: 10.15468/dl.dxwyya
title: Occurrence Download

description: A dataset containing 10425 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lissotriton boscai"
 ]
}

 The dataset includes 10425 records from 62 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033587-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jw474e
title: Occurrence Download

description: A dataset containing 714414 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Delphinidae"
 ]
}

 The dataset includes 714414 records from 1453 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0033526-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5ngwcp
title: Occurrence Download

description: A dataset containing 408 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Testudo kleinmanni",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation)"
 ]
}

 The dataset includes 408 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008231-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cuhkbj
title: Occurrence Download

description: A dataset containing 57662 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Felis silvestris",
 "Country is one of (Albania, Austria, Bosnia and Herzegovina, Belgium, Bulgaria, Belarus, Switzerland, Cyprus, Czechia, Germany, Denmark, Estonia, Spain, Finland, France, United Kingdom of Great Britain and Northern Ireland, Greece, Croatia, Hungary, Ireland, Italy, Lithuania, Luxembourg, Latvia, Moldova, Republic of, Montenegro, North Macedonia, Malta, Netherlands, Norway, Poland, Portugal, Romania, Serbia, Sweden, Slovenia, Slovakia, Türkiye, Ukraine, Kosovo)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 57662 records from 394 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008184-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hfct6c
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Barbus barbus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1835",
 "Year is less than or equal to 1839"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008233-260120142942310/datasets/export for details.
DOI: 10.15468/dl.yva7zj
title: Occurrence Download

description: A dataset containing 46 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lignocarpa carnosula",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 46 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008234-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bsgz7v
title: Occurrence Download

description: A dataset containing 2241 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Testudo marginata",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation)"
 ]
}

 The dataset includes 2241 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008235-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.qx9j6e
title: Occurrence Download

description: A dataset containing 557186 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "PublishingCountry is Colombia",
 {
 "and" : [
 "Country is Colombia",
 {
 "not" : {
 "Issue" : [
 "is Country coordinate mismatch"
 ]
 }
 }
 ]
 }
 ]
 },
 "Geometry POLYGON((-74.92253 11.19751,-74.84402 11.0916,-74.58103 11.00492,-74.44757 10.97602,-74.31411 10.9818,-74.23953 11.02996,-74.2199 11.10316,-74.21598 11.21484,-74.1571 11.29183,-74.00205 11.34379,-73.90196 11.313,-73.74102 11.24371,-73.42503 11.23601,-73.23858 11.25911,-72.90297 11.53616,-72.81465 11.60538,-72.7754 11.6592,-73.34849 11.94353,-73.33475 11.60922,-73.39167 11.53039,-73.4898 11.43807,-73.71158 11.41691,-73.80579 11.43037,-73.99224 11.44961,-74.15121 11.4573,-74.25327 11.3919,-74.34551 11.26874,-74.4299 11.18403,-74.57514 11.21099,-74.98729 11.34572,-74.92253 11.19751))"
 ]
}

 The dataset includes 557186 records from 446 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008206-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/14597308
title: Berita UNDIP
DOI: 10.4211/hs.ca15d66423dd494eaf8768f6f76af7aa
title: CELESTE-Clim: high-resolution climate projections for hydrological applications

description: Large-scale outputs from General Circulation and Earth System Models provide high-resolution climate projections for hydrological applications, including streamflow simulation, drought monitoring, and flood risk assessment. These models are essential tools for assessing climate responses under future greenhouse gas emission scenarios. Therefore, their projections often exhibit model-dependent biases that must be corrected before application in regional or local studies. In this work, we provide a dataset derived from an ensemble of eight CMIP6 climate models (CMCC-ESM2, EC-Earth3, EC-Earth3-CC, EC-Earth3-Veg, GFDL-ESM4, MPI-ESM1-2-HR, MRI-ESM2-0, and TaiESM1) for the SSP2-4.5 and SSP5-8.5 scenarios. The dataset covers the periods 1985-2014 (historical) and 2015-2100 (future), including daily variables (precipitation, tmin, tmax) and annual indicators derived from these variables. Bias correction was performed using Empirical Quantile Mapping (EQM), applied to ten climate indices, four related to precipitation, and six to temperature, for thirteen representative catchments located in Argentina, Brazil, Colombia, Uruguay, and France. Also, we provide a morphometric characterization for all study catchments. These areas cover a wide range of hydroclimatic regimes, land use, geology/soil types, and spatial scales.
DOI: 10.15468/dl.twg999
title: Occurrence Download

description: A dataset containing 1791 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Chrysocyon brachyurus"
 ]
}

 The dataset includes 1791 records from 81 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008237-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.m7hus2
title: Occurrence Download

description: A dataset containing 246 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lilaeopsis novae-zelandiae",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 246 records from 18 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008238-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6d9wvz
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Barbus barbus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1840",
 "Year is less than or equal to 1844"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008239-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eehehg
title: Occurrence Download

description: A dataset containing 4127 records in GBIF matching the query:
SELECT
 '208' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= 8.098015256935714
 AND decimalLatitude &lt;= 12.166598047573723
 AND decimalLongitude &gt;= -65.77134249531245
 AND decimalLongitude &lt;= -60.23797757464114
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 4127 records were derived from 65 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008223-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.h7qhuf
title: Occurrence Download

description: A dataset containing 748 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Niger",
 "OccurrenceStatus is Present",
 "TaxonKey is Balanites aegyptiaca"
 ]
}

 The dataset includes 748 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008240-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25934/pr00012529.0
title: Available datapackage for study 'Direct Bioelectronic Detection of SARS-CoV-2 From Saliva Using Single-Molecule Field-Effect Transistor Array'

description: Vivli is an independent, non-profit organization that has developed a global data-sharing and analytics platform to serve all elements of the international research community. Our mission is to promote, coordinate, and facilitate scientific sharing and reuse of clinical research data through the creation and implementation of a sustainable global data-sharing enterprise. The Vivli platform includes an independent data repository, in-depth search engine and a cloud-based, secure analytics platform.
DOI: 10.15468/dl.7xks9g
title: Occurrence Download

description: A dataset containing 16212 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Europe",
 "Country is Spain",
 "DatasetKey is one of (Banco de Datos de la Biodiversidad de la Comunitat Valenciana, FloraCAT: Banco de datos de los cormófitos de Cataluña, CSIC-Real Jardín Botánico-Anthos. Sistema de Información de las Plantas de España, DIBA-Parc del Montnegre i el Corredor, Flora vascular de Mallorca, Illes Balears, Sistema de Información de la vegetación Ibérica y Macaronésica)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Arundo donax"
 ]
}

 The dataset includes 16212 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008241-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zyfztg
title: Occurrence Download

description: A dataset containing 296 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Limnosciadium pinnatum",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 296 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008243-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.8jq5f6
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Barbus barbus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1845",
 "Year is less than or equal to 1849"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008242-260120142942310/datasets/export for details.
DOI: 10.5281/zenodo.18356179
title: Inequities in Access to Nephrology Health Care and Their Impact in the First Year of Hemodialysis: An Observational Study in Northeast Brazil

description: Dataset regarding individuals that initiated hemodialysis in a city of Brazil.
DOI: 10.15468/dl.g9kjzc
title: Occurrence Download

description: A dataset containing 1087554 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is one of (United States of America, Canada)",
 "DatasetKey is iNaturalist Research-grade Observations",
 "HasGeospatialIssue is false",
 "TaxonKey is Amphibia",
 "Year 2020-2025"
 ]
}

 The dataset includes 1087554 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008232-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xwkju3
title: Occurrence Download

description: A dataset containing 419 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lomatium linearifolium",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 419 records from 42 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008246-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.p6qpx5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Barbus barbus",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1850",
 "Year is less than or equal to 1854"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0008247-260120142942310/datasets/export for details.