cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.qw4us7
title: Occurrence Download

description: A dataset containing 2408 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "TaxonKey is Goniopteris tetragona (Sw.) C.Presl"
 ]
}

 The dataset includes 2408 records from 133 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023607-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/7t2b-d436
title: LDDsite3228 water chemistry dataset

description: Raw data for the LDDsite3228 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/8zgz-qw25
title: ELA 114 (Enache et al 2011) diatom dataset

description: Raw data for the ELA 114 (Enache et al 2011) diatom dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/f3pj-xs09
title: Johnnie Lake diatom dataset

description: Raw data for the Johnnie Lake diatom dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.11570/25.0069
title: arctic_mass_dimm: estimate seeing conditions measured with MASS/DIMM at Eureka/PEARL, compare to other sites
DOI: 10.21233/7j5x-e155
title: LDDsite5025 ostracode surface sample dataset

description: Raw data for the LDDsite5025 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/38b2-tc38
title: LDDsite1277 water chemistry dataset

description: Raw data for the LDDsite1277 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/repv-9p45
title: Chequamegon Flowage water chemistry dataset

description: Raw data for the Chequamegon Flowage water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/w2r5-ts85
title: Templo Mayor vertebrate fauna dataset

description: Raw data for the Templo Mayor vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/mtq3-c130
title: Chateauguay River ostracode surface sample dataset

description: Raw data for the Chateauguay River ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/wv28-bq86
title: Curtis L. diatom dataset

description: Raw data for the Curtis L. diatom dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/04bg-r186
title: LDDsite2073 water chemistry dataset

description: Raw data for the LDDsite2073 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/v3q1-5q58
title: Lake E503 water chemistry dataset

description: Raw data for the Lake E503 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/49xj-vc56
title: LDDsite3951 ostracode surface sample dataset

description: Raw data for the LDDsite3951 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/wg3x-5879
title: La Botica plant macrofossil dataset

description: Raw data for the La Botica plant macrofossil dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/c5vx-zd33
title: LDDsite3810 water chemistry dataset

description: Raw data for the LDDsite3810 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/recf-wq10
title: Christ water chemistry dataset

description: Raw data for the Christ water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/sw5f-sv50
title: Swiss Trap M5 pollen surface sample dataset

description: Raw data for the Swiss Trap M5 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/mgwj-ve63
title: Great Whale River pollen surface sample dataset

description: Raw data for the Great Whale River pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/5h6q-t714
title: LDDsite2500 ostracode surface sample dataset

description: Raw data for the LDDsite2500 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/r49j-kc51
title: Loch Mary Reservoir water chemistry dataset

description: Raw data for the Loch Mary Reservoir water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/smnw-5r08
title: Long (SHEFLD) diatom surface sample dataset

description: Raw data for the Long (SHEFLD) diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/fdmk-7m37
title: LDDsite2102 water chemistry dataset

description: Raw data for the LDDsite2102 water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.7910/dvn/wsvskg
title: DOA

description: DOA (precificação) e Despesa administrativa (previsão)
DOI: 10.21233/2cea-ns43
title: LDDsite1453 ostracode surface sample dataset

description: Raw data for the LDDsite1453 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/s6c4-6146
title: Lac de Creno pollen dataset

description: Raw data for the Lac de Creno pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/4xaj-bp79
title: Prairie Farm Spring pollen surface sample dataset

description: Raw data for the Prairie Farm Spring pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/92fz-zg58
title: Stordalen testate amoebae surface sample dataset

description: Raw data for the Stordalen testate amoebae surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/mavn-na25
title: Oiwa ostracode surface sample dataset

description: Raw data for the Oiwa ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/6een-gz69
title: Phelps Lake ostracode surface sample dataset

description: Raw data for the Phelps Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/4519-1s09
title: Panther Pond water chemistry dataset

description: Raw data for the Panther Pond water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/v0gr-bd21
title: LDDsite4574 ostracode surface sample dataset

description: Raw data for the LDDsite4574 ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/pkpw-9f93
title: Lake Vernon ostracode surface sample dataset

description: Raw data for the Lake Vernon ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/n3vg-cf70
title: Caruth Lake diatom dataset

description: Raw data for the Caruth Lake diatom dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/anxt-2m83
title: Dogfish Lake diatom surface sample dataset

description: Raw data for the Dogfish Lake diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/fkjg-rk36
title: Kelso Cave [AjGx-VP] vertebrate fauna dataset

description: Raw data for the Kelso Cave [AjGx-VP] vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/z2k1-bf11
title: LRRB43 pollen surface sample dataset

description: Raw data for the LRRB43 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/wqhk-3c84
title: ABD211 pollen surface sample dataset

description: Raw data for the ABD211 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/gpv8-sq13
title: FARWIL08 pollen surface sample dataset

description: Raw data for the FARWIL08 pollen surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/7436-ph05
title: Hoya Rincon de Parangueo pollen dataset

description: Raw data for the Hoya Rincon de Parangueo pollen dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/4yj7-ea83
title: Wasp Lake [ELA 165 (Enache et al 2011)] water chemistry dataset

description: Raw data for the Wasp Lake [ELA 165 (Enache et al 2011)] water chemistry dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/fv04-mc08
title: Ivanhoe Pond diatom bottom sample dataset

description: Raw data for the Ivanhoe Pond diatom bottom sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/nmkg-j159
title: Mirror Lake (Carroll) diatom surface sample dataset

description: Raw data for the Mirror Lake (Carroll) diatom surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/1npf-k540
title: Crawl Cave vertebrate fauna dataset

description: Raw data for the Crawl Cave vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/8b5m-0m22
title: Okanagan Lake ostracode surface sample dataset

description: Raw data for the Okanagan Lake ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.21233/1kwj-m706
title: Kings Bay Plantation [9CAM172] vertebrate fauna dataset

description: Raw data for the Kings Bay Plantation [9CAM172] vertebrate fauna dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.57982/cn8s-t371
title: Trial to Shorten Pharmacologic Treatment of Newborns With Neonatal Opioid Withdrawal Syndrome (NOWS)

description: ACT NOW Weaning Trial was a pragmatic, randomized, blinded trial conducted to compare a rapid-wean intervention (15% decrements from the stabilization dose) with a slow-wean intervention (10% decrements from the stabilization dose) to determine whether rapid weaning reduces the number of treatment days among infants receiving morphine or methadone orally as the primary treatment for Neonatal Opioid Withdrawal Syndrome (NOWS). Hospitals could change use of these opioids during trial period. Randomization was stratified by hospital. Study protocol commenced after NOWS signs were controlled with an opioid (stabilization) and weaning of pharmacologic treatment was to be started. At or before each 24-hour interval, clinical team members evaluated and scored infants, per hospital practice, for signs of NOWS to determine if infant would tolerate weaning of study drug. After study drug cessation, clinical team observed infants for at least 48 hours prior to discharge. A trained examiner administered the NeoNatal Neurobehavioral Scale, 2nd edition (NNNS-II) to assess neurobehavioral profiles after ceasing study drug prior to discharge.
DOI: 10.15468/dl.k5jdjg
title: Occurrence Download

description: A dataset containing 617 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Specimen",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Goniopteris tetragona (Sw.) C.Presl"
 ]
}

 The dataset includes 617 records from 73 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023608-250426092105405/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21233/154b-4j47
title: Ningbo  ostracode surface sample dataset

description: Raw data for the Ningbo  ostracode surface sample dataset submitted to the Neotoma Paleoecology Database. Data is available through the landing page in JSON format. The landing page referenced by the DOI also contains links to publications and a map-based viewer for the dataset. The Neotoma Paleoecology Database maintains a homepage at https://www.neotomadb.org.
DOI: 10.5281/zenodo.15322323
title: A cfChIP-seq liquid biopsy for the diagnosis of autoimmune hepatitis

description: Autoimmune hepatitis (AIH) is a chronic inflammatory liver disorder characterized by immune-mediated hepatocyte injury, associated with significant morbidity and mortality. Patients undergo liver biopsy to confirm diagnosis and affirm subsequent remission. Although liquid biopsies have emerged as promising non-invasive alternatives in oncology, their applicability in liver diseases remains largely unexplored. Here, we use plasma chromatin immunoprecipitation and sequencing (cfChIP-seq) to analyze cell-free nucleosomes carrying an active histone modification, which reports on gene transcription in the dying cells. Comparing cfChIP-seq profiles of plasma samples from AIH patients (46 pediatric and 34 adult) with those of a control group (79/10 adult and pediatric patients, respectively), we identify immune-related transcriptional processes activated in the hepatocytes of AIH patients and verify these using RNA-seq on matched liver biopsies. We develop a classifier that distinguishes plasma cfChIP-seq profiles of AIH from other conditions involving liver injury. This classifier achieves a high level of performance, with an area under the ROC curve (AUC) of 0.92.  Our work demonstrates the potential of plasma cfChIP-seq as a non-invasive diagnostic tool for AIH, offering opportunities to reduce the need for liver biopsies, enhance diagnostic precision, and advance our understanding of AIH pathogenesis.
description: cfChIP-seq_AIH_geneCounts.csv contains the table of Genes X plasma cfChIP-seq samples.  The value in cfChIP-seq_AIH_geneCounts.csv[i,j] is the normalized promoter coverage of gene j in sample i. 

Detailed information can be found in the manuscripts methods.