cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/b0z1m-b4125
title: MT-MreB treated w/ aurothiogluco

description: Raw data files of MT-MreB treated w/ aurothiogluco
description: <strong>Tilt Series Date:</strong> 2009-07-21</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 190.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR Peach</p>
<strong>Collaborators and Roles:</strong> Cell culture and treatment by Zhuo Li. Data collected by Zhuo Li. Processed by Zhuo Li. </p>
<strong>Purification / Growth Conditions / Treatment:</strong> Exponentially growing MT310 cells were treated with 50 uM aurothioglucose for 20 hours before freezing. </p>
<strong>Sample Preparation:</strong> 10 nm gold. </p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-07-21-47/rawdata/</p>09jul21a_mtmrebaurothio_011.mrc,  Tilt Series (Pixel Size 1.2 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-07-21-47/rawdata/09jul21a_mtmrebaurothio_011.mrc"
        > <i class="download icon"></i> Download </a></p>

        09jul21a_mtmrebaurothio_011_part.rec,  Reconstruction (Pixel Size 2.4 nm), 367.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-07-21-47/3dimage_5961/09jul21a_mtmrebaurothio_011_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.numnba
title: Occurrence Download

description: A dataset containing 40085 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Panicum serotinum, Panicum setaceum, Panicum setosum, Panicum sibiricum, Panicum verticillatum major, Panicum verticillatum majus, Panicum verticillatum majus, Panicum viride italicum, Panicum viride italicum, Panicum viride italicum, Panicum vulgare, Panicum vulgare, Paspalum germanicum, Penicillaria italica, Pennisetum erythrospermum, Pennisetum germanicum, Pennisetum helvolum, Pennisetum italicum, Pennisetum macrochaetum, Setaria verticillata, Chaetochloa ambigua, Chaetochloa verticillata, Chaetochloa verticillata breviseta, Chaetochloa verticillata breviseta, Chamaeraphis italica densa, Chamaeraphis italica verticillata, Chamaeraphis italica ambigua, Chamaeraphis italica densa, Chamaeraphis italica verticillata, Chamaeraphis verticillata, Ixophorus verticillatus, Panicum ambiguum, Panicum ambiguum latifolium, Panicum asperum, Panicum decipiens, Panicum decipiens schultheissii, Panicum floribundum, Panicum floribundum, Panicum italicum, Panicum italicum longisetum, Panicum respiciens, Panicum rude, Panicum rude, Panicum verticillatum, Panicum verticillatum brevisetum, Panicum verticillatum parviflorum, Panicum verticillatum retrorsum, Panicum verticillatum ambiguum, Panicum verticillatum antrorsum, Panicum verticillatum arenosum)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Machine Observation)"
 ]
 }
 },
 "Continent is Europe",
 "Year is greater than or equal to 1980",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 40085 records from 467 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047532-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/y048h-wt965
title: Hyphomicrobium facile session13 34KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2009-04-14</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomicrobium facile</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-64.0°, 64.0°), step: 1.5°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -7.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in ATCC-656 media...</p>
<strong>Sample Preparation:</strong> C-flat grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at ttps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-04-14-25/rawdata/</p>09apr14a_Bhf2b_026.mrc,  Tilt Series (Pixel Size 0.632 nm), 738.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-04-14-25/rawdata/09apr14a_Bhf2b_026.mrc"
        > <i class="download icon"></i> Download </a></p>

        09apr14a_Bhf2b_026_full.rec,  Reconstruction (Pixel Size 1.264 nm), 314.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-04-14-25/3dimage_7559/09apr14a_Bhf2b_026_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.e6fz6b
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Haematortyx sanguiniceps",
 "Country is China",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047535-250811113504898/datasets/export for details.
DOI: 10.22002/5j9ed-j7y60
title: (D161A)MamK-GFP/wild type

description: Raw data files of (D161A)MamK-GFP/wild type
description: <strong>Tilt Series Date:</strong> 2009-11-23</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum</p>
<strong>Strain:</strong> AMB-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -16.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach</p>
<strong>Collaborators and Roles:</strong> Cells provided by Arash Komeili; data collected by ZL.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> (Probably) stationary phase </p>
<strong>Sample Preparation:</strong> Quantifoil R2/2, R2/1, 10nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-23-51/rawdata/</p>09nov23a_D161Awt_051.mrc,  Tilt Series (Pixel Size 1.192 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-23-51/rawdata/09nov23a_D161Awt_051.mrc"
        > <i class="download icon"></i> Download </a></p>

        09nov23a_D161Awt_051_full.rec,  Reconstruction (Pixel Size 2.384 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-11-23-51/3dimage_9727/09nov23a_D161Awt_051_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/bxer1-vg213
title: HeLa CHMP4A+VPS4DN

description: HeLa cells transfected with CHMP4A+VPS4DN constructs
description: <strong>Tilt Series Date:</strong> 2011-07-23</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HeLa cells</p>
<strong>Strain:</strong> ATCC</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -7.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> CHMP4A and VPS4DN obstruct provided by Wes Sundquist. Cells transfected, frozen and imaged at Caltech by Cora Woodward</p>
<strong>Purification / Growth Conditions / Treatment:</strong> whole cells grown on grids and transfected</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at ://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-07-23-5/rawdata/</p>11jul23_hela_4aDNlipo_0007_trim.st,  Tilt Series (Pixel Size 0.5 nm), 710.2 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-07-23-5/rawdata/11jul23_hela_4aDNlipo_0007_trim.st"
        > <i class="download icon"></i> Download </a></p>

        11jul23_hela_4aDNlipo_0007_trim_full.rec,  Reconstruction (Pixel Size 2.0 nm), 877.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2011-07-23-5/3dimage_68330/11jul23_hela_4aDNlipo_0007_trim_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/gvqh1-djt38
title: MamJ deletion (and might contain

description: Raw data files of MamJ deletion (and might contain
description: <strong>Tilt Series Date:</strong> 2010-02-18</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum</p>
<strong>Strain:</strong> AMB-1</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1.5°, constant angular increment, dosage: 110.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR and Peach</p>
<strong>Collaborators and Roles:</strong> Cell culture were from Arash Komeili. Upon receiving, cells were frozen in 2 hours. Meanwhile they were kept in 30C. Data collected and processed by ZL.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Stationary phase. </p>
<strong>Sample Preparation:</strong> R2/2, 10nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2010-02-18-7/rawdata/</p>10feb18a_dJnofe2_007.mrc,  Tilt Series (Pixel Size 1.192 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2010-02-18-7/rawdata/10feb18a_dJnofe2_007.mrc"
        > <i class="download icon"></i> Download </a></p>

        10feb18a_dJnofe2_007_full.rec,  Reconstruction (Pixel Size 2.384 nm), 524.3 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2010-02-18-7/3dimage_9362/10feb18a_dJnofe2_007_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/sy500-9je90
title: Bsubtilis MJ007

description: Bsubtilis MJ007, skinny Bacillus
description: <strong>Tilt Series Date:</strong> 2011-07-19</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> MJ007, ponA null</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from Kit Pogliano at UCSD</p>
<strong>Purification / Growth Conditions / Treatment:</strong> sporulation media</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-07-19-21/3dimage_25029/</p>grid20006_full.rec,  Reconstruction (Pixel Size 1.9 nm), 924.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-07-19-21/3dimage_25029/grid20006_full.rec"
        > <i class="download icon"></i> Download </a></p>

        grid20006.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-07-19-21/rawdata/grid20006.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.qykfc9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ictalurus punctatus",
 "Country is Romania",
 "HasCoordinate is true"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047536-250811113504898/datasets/export for details.
DOI: 10.22002/zj49e-7nr33
title: B. subtilis AD3268

description: Raw data files of B. subtilis AD3268
description: <strong>Tilt Series Date:</strong> 2011-12-09</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> AD3268, ponA null, Alp7A</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Joe Pogliano</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in LB</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-12-09-29/rawdata/</p>32680029.mrc,  Tilt Series (Pixel Size 1.9 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-12-09-29/rawdata/32680029.mrc"
        > <i class="download icon"></i> Download </a></p>

        32680029_full.rec,  Reconstruction (Pixel Size 3.8 nm), 929.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-12-09-29/3dimage_16120/32680029_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/15ywa-fff11
title: Delftia acidovorans in NB

description: Delftia acidovorans Cs1-4 grown in NB
description: <strong>Tilt Series Date:</strong> 2009-03-30</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Delftia acidovorans</p>
<strong>Strain:</strong> Cs1-4</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: 0.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> imod</p>
<strong>Collaborators and Roles:</strong> grown by Bill Hickey at UW-Madison; data collected and processed by Elitza Tocheva</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Grown in NB.</p>
<strong>Sample Preparation:</strong> 20nm gold, 2s blot, -2 offset</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2009-03-30-32/rawdata/</p>09mar30c_WTonNB_007.mrc,  Tilt Series (Pixel Size 0.962 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2009-03-30-32/rawdata/09mar30c_WTonNB_007.mrc"
        > <i class="download icon"></i> Download </a></p>

        wt7_full.rec,  Reconstruction (Pixel Size 1.924 nm), 597.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2009-03-30-32/3dimage_94737/wt7_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/vknmn-gtm98
title: MT310_xyl+_aurothioglucose(50um)

description: Raw data files of MT310_xyl+_aurothioglucose(50um)
description: <strong>Tilt Series Date:</strong> 2009-10-21</p>
<strong>Data Taken By:</strong> Zhuo Li</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -12.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> webload</p>
<strong>Processing Software Used:</strong> RAPTOR, Peach</p>
<strong>Collaborators and Roles:</strong> The MT310 strain was constructed by Martin Thanbichler; cells were cultured and treated by Zhuo Li; data were collected and processed by Zhuo Li.</p>
<strong>Purification / Growth Conditions / Treatment:</strong> The cells were induced by xylose for ? hours and treated by aurothioglucose for ? hours</p>
<strong>Sample Preparation:</strong> 10 nm gold. </p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-10-21-28/rawdata/</p>09oct21a_MT310Auglu50_028.mrc,  Tilt Series (Pixel Size 1.192 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-10-21-28/rawdata/09oct21a_MT310Auglu50_028.mrc"
        > <i class="download icon"></i> Download </a></p>

        09oct21a_MT310Auglu50_028_part.rec,  Reconstruction (Pixel Size 2.384 nm), 471.9 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/zla2009-10-21-28/3dimage_9950/09oct21a_MT310Auglu50_028_part.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.2kpbtp
title: Occurrence Download

description: A dataset containing 20 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Ictalurus punctatus",
 "Country is Russian Federation",
 "HasCoordinate is true"
 ]
}

 The dataset includes 20 records from 3 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0047537-250811113504898/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/ts8aj-3n796
title: Bsubtilis349

description: Bsubtilis JFG349 (MJ007, SpoIIIE78-11-GFP)
description: <strong>Tilt Series Date:</strong> 2011-07-19</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> JFG349, ponA null, SpoIIIE73-11-GFP</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from Kit Pogliano at UCSD</p>
<strong>Purification / Growth Conditions / Treatment:</strong> sporulation media</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-07-19-9/3dimage_25005/</p>349target0001_full.rec,  Reconstruction (Pixel Size 1.9 nm), 671.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-07-19-9/3dimage_25005/349target0001_full.rec"
        > <i class="download icon"></i> Download </a></p>

        349target0001.mrc,  Tilt Series (Pixel Size 0.95 nm), 1.0 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2011-07-19-9/rawdata/349target0001.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/dvzch-3vy36
title: E.coli "strain8" Tsr-A413G

description: CheA-on state
description: <strong>Tilt Series Date:</strong> 2011-11-28</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-63.0°, 63.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> strain from Sandy Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> grown in TB medium</p>
<strong>Sample Preparation:</strong> Lysed with Penicillin for one hour</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-11-28-14/rawdata/</p>strain8nov2011_0014.mrc,  Tilt Series (Pixel Size 0.644 nm), 1.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-11-28-14/rawdata/strain8nov2011_0014.mrc"
        > <i class="download icon"></i> Download </a></p>

        strain8nov2011_0014_full.rec,  Reconstruction (Pixel Size 1.288 nm), 516.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2011-11-28-14/3dimage_15835/strain8nov2011_0014_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/vff3a-vyw17
title: Hyphomonas chq session18 41KX

description: high-order DNA, H-NS, nucleoid, asymmetric cell division
description: <strong>Tilt Series Date:</strong> 2009-06-24</p>
<strong>Data Taken By:</strong> Jian Shi</p>
<strong>Species / Specimen:</strong> Hyphomonas neptunium</p>
<strong>Strain:</strong> ATCC 15444</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-61.0°, 61.0°), step: 2°, constant angular increment, dosage: 75.0 eV/Å²,  defocus: -7.0 μm,  magnification: 0x. </p>
<strong>Acquisition Software:</strong> Leginon</p>
<strong>Upload Method:</strong> rundir</p>
<strong>Processing Software Used:</strong> raptor</p>
<strong>Collaborators and Roles:</strong> Cultured by Jian; data collected by Jian; processed by Jian</p>
<strong>Purification / Growth Conditions / Treatment:</strong> exponential phase in PYE media, chloroquine 1.0mg/ml, 4degree...</p>
<strong>Sample Preparation:</strong> QF grid, 10nm gold, 100% humidity...</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/jsa2009-06-24-26/rawdata/</p>09jun24a_bx217c_058.mrc,  Tilt Series (Pixel Size 0.512 nm), 520.1 MB  
        
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        09jun24a_bx217c_058_part.rec,  Reconstruction (Pixel Size 1.024 nm), 419.4 MB  
        
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