cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.29571392
title: Supplementary Material for: Fork Stalling and Template Switching in a Complex der(6)dn with Duplication of 6q24.3qter and 6p25.3: A Case Report

description: Introduction. Partial trisomy of the 6q24qter region is a rare chromosomal disorder characterized by variable clinical features and poorly understood mechanistic origins. Case Presentation. We describe a de novo complex der(6) chromosome in a patient with features consistent with partial 6q trisomy syndrome, including congenital heart disease, growth restriction, developmental delay, and dysmorphic traits. Molecular Findings. Whole-genome sequencing (WGS) identified duplications of 1.5 Mb on 6p25.3 and 23.3 Mb on 6q24.3–qter. While the 6p duplication appears benign, the phenotype is likely driven by dosage-sensitive 6q genes (ARID1B, TAB2, QKI) and possible additive effects from other duplicated genes. No parental pericentric inversion was detected by classical or molecular cytogenetics, and WGS revealed no inversion-associated breakpoints. Instead, chimeric (q−/q+) and truncated reads at the 6q junction support a replication-based origin, such as reversed template switching. FISH confirmed direct insertion of the 6q segment into 6p25.3, without a del/dup pattern typical of inversion-derived recombinants. Notably, WGS detected no direct 6p–6q junction reads, but identified chimeric 6p–15q–6q reads with 2-bp microhomologies, suggesting that chromosome 15 transiently mediated the rearrangement. Interspersed telomeric sequences and flanking Alu elements were also found at both breakpoints. Conclusion. Altogether, these findings support a model in which replication fork stalling and template switching—potentially facilitated by telomere dynamics and repetitive elements—led to the formation of a recombinant-like der(6) chromosome. This case highlights the mechanistic complexity of structural rearrangements and the role of replication-based errors in shaping human genomic variation.
DOI: 10.6084/m9.figshare.29571392.v1
title: Supplementary Material for: Fork Stalling and Template Switching in a Complex der(6)dn with Duplication of 6q24.3qter and 6p25.3: A Case Report

description: Introduction. Partial trisomy of the 6q24qter region is a rare chromosomal disorder characterized by variable clinical features and poorly understood mechanistic origins. Case Presentation. We describe a de novo complex der(6) chromosome in a patient with features consistent with partial 6q trisomy syndrome, including congenital heart disease, growth restriction, developmental delay, and dysmorphic traits. Molecular Findings. Whole-genome sequencing (WGS) identified duplications of 1.5 Mb on 6p25.3 and 23.3 Mb on 6q24.3–qter. While the 6p duplication appears benign, the phenotype is likely driven by dosage-sensitive 6q genes (ARID1B, TAB2, QKI) and possible additive effects from other duplicated genes. No parental pericentric inversion was detected by classical or molecular cytogenetics, and WGS revealed no inversion-associated breakpoints. Instead, chimeric (q−/q+) and truncated reads at the 6q junction support a replication-based origin, such as reversed template switching. FISH confirmed direct insertion of the 6q segment into 6p25.3, without a del/dup pattern typical of inversion-derived recombinants. Notably, WGS detected no direct 6p–6q junction reads, but identified chimeric 6p–15q–6q reads with 2-bp microhomologies, suggesting that chromosome 15 transiently mediated the rearrangement. Interspersed telomeric sequences and flanking Alu elements were also found at both breakpoints. Conclusion. Altogether, these findings support a model in which replication fork stalling and template switching—potentially facilitated by telomere dynamics and repetitive elements—led to the formation of a recombinant-like der(6) chromosome. This case highlights the mechanistic complexity of structural rearrangements and the role of replication-based errors in shaping human genomic variation.
DOI: 10.15468/dl.h5ucjj
title: Occurrence Download

description: A dataset containing 234915 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Cymbalaria muralis"
 ]
}

 The dataset includes 234915 records from 1200 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016685-250711103210423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.17632/6fj7jwzjs9
title: Predictive performance of AMH AFC PPOS

description: Predictive performance of AMH AFC in PPOS
DOI: 10.17632/mfsfzkk7mw
title: FPS application of the article "Retopología de mallas aplicada a modelos 3D de patrimonio cultural para la mejora de la visualización interactiva en realidad virtual y realidad aumentada"

description: This is the self-running application that allows you to compare the graphical performance of your PC when using photogrammetric 3D models and models under mesh retopology. The development of this application is part of the work published in the article "Retopología de mallas aplicada a modelos 3D de patrimonio cultural para la mejora de la visualización interactiva en realidad virtual y realidad aumentada". The instructions for use are inside the file.
DOI: 10.17632/bvbvyhdwxw
title: Data for: Identification of highly-cited papers using topic-model-based and bibliometric features: the consideration of keyword popularity

description: prediction of highly-cited papers in marketing and MIS
DOI: 10.17632/3yh93wzm3x
title: The OC related data

description: The organic carbon-related data used in the research
DOI: 10.17632/rmzrnz2nd7
title: The effect of substrate temperature and oxygen partial pressure on the properties of nanocrystalline copper oxide thin films grown by pulsed laser deposition

description: The data presented in this paper are related to the research article entitled “Pulsed laser deposition of single phase n- and p-type Cu2O thin films with low resistivity” (S.F.U. Farhad et al., 2020)[1]. The detailed processing conditions of copper oxide thin films and a variety of characterization techniques used are described in the same ref. [1] https://doi.org/10.1016/j.matdes.2020.108848. Thin films need to grow on different substrates to elucidate various properties of the individual layer for attaining optimum processing conditions required for devising efficient optoelectronic junctions as well as thin film stacks for different sensing applications. This article describes the effect of substrate temperature and oxygen partial pressure on the structural, morphological, optical, and electrical properties of pulsed laser deposited (PLD) nanocrystalline copper oxide thin films on quartz glass, ITO, NaCl(100), Si(100), ZnO coated FTO substrates. The low temperature grown copper oxide and zinc oxide thin films by PLD were used for devising solid n-ZnO/p-Cu2O junction and investigated their photovoltaic and interface properties using dynamic photo-transient current measurement at zero bias voltage and TEM/EDX respectively. These datasets are made publicly available for enabling extended analyses and as a guide for further research.
DOI: 10.17632/cyth4phhg4
title: Data for: Chemometrics modelling of temporal changes of ozone half hourly concentrations in different monitoring stations

description: Ozone raw data corresponding to the submitted paper: Chemometrics modelling of temporal changes of ozone half hourly concentrations in different monitoring stations Authoes: Mahsa Dadashi, David Pages Farre, Isabel Hernandez, Romà Tauler
DOI: 10.17632/v3m5wd94yt
title: Raw data for the manuscript: "Enhancing plant growth in aquaponic systems via potassium manipulation in fish feeds: a pilot study of tailored feeds bridging nutritional gaps in aquaponics"

description: Raw data for the manuscript: "Enhancing plant growth in aquaponic systems via potassium manipulation in fish feeds: a pilot study of tailored feeds bridging nutritional gaps in aquaponics"
DOI: 10.17632/yy2sjvwwr6
title: Bitcoin, euro, ether, SPY

description: The purpose of the dataset is to compare the diffusion of bitcoin, the euro, ethereum, and the security SPY. If the diffusion was r-shaped, then it occurred through environmental learning-based (individual learning-based) adoption; if the diffusion was s-shaped, then it occurred through cultural transmission-based adoption (Henrich 2001). The large-scale diffusion of technology-based products generally occurs through cultural transmission and traces out s-shaped curves (Marinakis 2012, Marinakis et al. 2018). The number of euros in circulation shows how currency diffuses. The time series of the total number of Bitcoin that have already been mined was obtained from Blockchain. The time series of the diffusion of the number of euro bank notes and coins was obtained from the European Central Bank website. For further comparisons and insights, diffusion data of another cryptocurrency, ether, and of a security, SPY, were also obtained. The data sets are comma delimited and comprise daily data. The file total-bitcoins.csv has the format: date, number of bitcoins minted The file euro.csv has the format: date, number of euros in circulation (bank notes and coins) The file ether.csv has the format: date, UnixTime, number of ether minted The file SPY.csv has the format: date, net asset value, shares outstanding, total net assets
DOI: 10.6084/m9.figshare.28429001.v1
title: Supplementary Material for: Anatomy, histology, etiology, development and functions of cartilago cordis: A systematic review.

description: Introduction: The cartilago cordis is a structure present within the cardiac skeleton of some, but not all, vertebrate species. This systematic review compared the presence, structure and function of the cartilago cordis from published works covering all vertebrate species. Methods: Literature searches were conducted to obtain information relating to the anatomical location, morphology, prevalence, number of structures, development and function. Results: The cartilago cordis was most commonly composed of hyaline cartilage but its location within the cardiac skeleton, anatomical and histological structure varied between species. The cartilago cordis has not been documented in every vertebrate species, or every individual within each species, but it is present in 68 vertebrates including an amphibian, and some mammals, reptiles and birds. The function of the cartilago cordis is unknown, but theories have ranged from an adaptive mechanism to support cardiac tissue through to roles in conduction and contraction, especially in areas of high mechanical stress. Possible links between the presence of a cartilago cordis and cardiac pathologies were also identified. Conclusion: The cartilago cordis varied in prevalence, structure, and location; further research is required to understand the function and development. In addition, it is possible there are more vertebrate species containing cartilago cordis than presently known about given its varying prevalence and sometimes small size.
DOI: 10.17632/9xf2zmjvjp
title: IMPACT OF INCOME ON HEALTH IN SUB-SAHARAN AFRICA

description: The data examined impact of income on health in a panel of 29 Sub-Saharan African economies over the period 1996 - 2015. It is made up of ten macroeconomic variables; this includes two alternative dependent variables, three qualitative variables, and five quantitative explanatory variables. All quantitative variables were sourced from the World Bank world development indicators (WDI) database. Results of estimation indicate an insignificant impact of income on health in SSA.
DOI: 10.17632/rgnp6gmb9s
title: Included publications

description: We systematically organized and categorized papers in an Excel spreadsheet according to specific criteria such as article title, publication year, journal name, ABS journal ranking, methodology, area and industry background, and key highlights.
DOI: 10.17632/5bxf9d5t5v
title: Fouling communities observed in three different marinas in the Sanremo coastal stretch (Ligurian Sea, Italy)

description: Species list of the fouling communities collected in three different marinas in the Sanremo coastal stretch (Ligurian Sea, Italy), in September 2020. The three marinas are: i) Ospedaletti, a nearly finished, abandoned and unused marina; ii) Porto Vecchio, hosting only local fishing boats; and iii) Porto Sole, characterized by an international recreational boat traffic.
Non-indigenous species are highlighted in red font.
DOI: 10.6084/m9.figshare.12934781.v1
title: Crosslinguistic Correspondence Rule Exploration and Vocabulary Learning

description: This folder contains supplementary material for the article "Effects of Crosslinguistic Correspondence Rule Exploration on Foreign Language Vocabulary Learning" by Nina Selina Müller, reporting results from an interventional study with 17 classes in the Canton of Berne as part of the MA Thesis published in January 2020 at the University of Fribourg (CH).<br>The .csv file "dataMueller2020" contains an abbreviated version of the data necessary to replicate the analysis reported in the article. The corresponding R Code and HTML output are available for download, containing the code and complete output of all computations reported.<br><br>The .xlsx document "Cognates German - English" contains a list of 801 word pairs exhibiting a systematic correspondence, which served as a basis for the development of the teaching material and test battery.<br>The .zip folder "Material for instructors" contains all teaching material including instructions, lesson plans, worksheet and games developed for the intervention and test battery, geared towards Grade 5 and 6 Swiss-German learners of English as a second foreign language.<br>The .zip folder "Experiment Mueller 2020" contains the code (written using jsPsych, de Leeuw) for the test procedure. An abbreviated exemplary version can be accessed via http://kognaten.com/example/ using the sample ID Z707.<br>The .pdf document "Items" contains the list of stimuli used for the three vocabulary learning activities as part of the test battery and includes the guideline applied for the scoring of the data.
DOI: 10.17632/yxkjd8p87d
title: Base de datos de Investigadores Científicos de Panamá

description: Base de datos de Investigadores Científicos de Panamá
DOI: 10.6084/m9.figshare.19499174.v1
title: patches and local annotations, slide 019, zoom 248x248 um2

description: patches and local annotations: data for slide with ID of the last 3 characters of the file name: local annotations in csv format and a folder with patches at zoom level indicated at the 6th character of the file name
DOI: 10.17632/ckv3t989w9
title: Data of paper "A Grip Force Planning Method for Reliable and Rapid Fruit Grasping Based on Rupture Force Estimation"

description: In the related paper, we proposed an online estimation method of fruit rupture force based on stiffness perception. This dataset includes the training data and the online validation data, based on which we got and validated the relationship between the rupture forces and the stiffness of banana slices and kiwi slices.

This dataset consists of two folders: banana and kiwi, standing for the data of bananas and kiwis, respectively. Each folder includes two sub folders training set and validation set. The training set includes the data for training the relationship between rupture force and stiffness. In this folder, the data are stored with an python script train_model.py, which is used to get the linear relation proposed in the paper. The validation set includes the the data for validation the online estimation performance. In this folder, the data are stored with an python script break_force_est_offline.py, which is to simulate the online estimation process and output the final estimation of rupture force based on the collected data.

The data in the dataset are collected in the way mentioned in the paper.
DOI: 10.17632/yr7xhzckbf
title: IMPORTANCE OF EDUCATION FOR A BETTER SOCIAL HEALTH FOR WOMEN

description: Constitution of India has several provisions to safeguard the interest of woman of our country however; they still continue to face gender disparities, sexual harassment and are deprived of their basic Human Rights. One of the reasons for poor status of women in our society is “Ignorance and lack of education”. By reviewing the available
reports and articles, this paper would make an attempt to highlight the relevant causes which may lead to hindrance in the path of Women’s Education. Further by conducting some case studies we would also try to understand how educating a woman may bring about a positive and an overall sustainable growth in our society and enhance
their social health. Efforts would also be made to recommend measures by which we may promote education for women, which would not only be restricted to basic or elementary education but to a higher level as well. Moreover in an Indian society, girls are educated only to become better home makers But education for woman shall not be
only limited within the private sphere, but we must ensure that she may also contribute her cognitive skills and creative thinking effectively in the public sphere and thus ensure a dignified life for herself and a much better society for tomorrow. Further Educated Women may contribute to promote a healthy society, where she may be empowered
enough to take decision for own self and also for her family. She knows about her Health Rights and may vouch for it, if she is deprived of it. Thus Education and Social Health are interlinked, and this is what we would like to establish in this paper.
DOI: 10.6084/m9.figshare.14907972.v1
title: A Dataset of Blood Perfusion in the Lower Extremities and HRV at Different Positions

description: In this study, healthy participants were placed in different body positions. The bilateral blood flux and electrocardiogram were monitored.
DOI: 10.6084/m9.figshare.24305730.v1
title: Supplement- raw data and R scripts.zip from Jaw size variation is associated with a novel craniofacial function for galanin receptor 2 in an adaptive radiation of pupfishes

description: Understanding the genetic basis of novel adaptations in new species is a fundamental question in biology. Here we demonstrate a new role for galr2 in vertebrate craniofacial development using an adaptive radiation of trophic specialist pupfishes endemic to San Salvador Island, Bahamas. We confirmed the loss of a putative Sry transcription factor binding site upstream of galr2 in scale-eating pupfish and found significant spatial differences in galr2 expression among pupfish species in Meckel's cartilage using <i>in situ</i> hybridization chain reaction (HCR). We then experimentally demonstrated a novel function for Galr2 in craniofacial development by exposing embryos to Garl2-inhibiting drugs. Galr2-inhibition reduced Meckel's cartilage length and increased chondrocyte density in both trophic specialists but not in the generalist genetic background. We propose a mechanism for jaw elongation in scale-eaters based on reduced expression of galr2 due to the loss of a putative Sry binding site. Fewer Galr2 receptors in the scale-eater Meckel's cartilage may result in their enlarged jaw lengths as adults by limiting opportunities for a postulated Galr2 agonist to bind to these receptors during development. Our findings illustrate the growing utility of linking candidate adaptive SNPs in non-model systems with highly divergent phenotypes to novel vertebrate gene functions.
DOI: 10.6084/m9.figshare.7246295.v1
title: Supplementary Material for: High Glucose-Mediated Cytokine Regulation in Gingival Fibroblasts and THP-1 Macrophage: a Possible Mechanism of Severe Periodontitis with Diabetes

description: <b><i>Background/Aims:</i></b> Diabetic patients are susceptible to severe periodontitis, but the precise mechanism is not fully understood. Aim of this study was to explore the biological pathogenesis of severe periodontitis in diabetic patients focusing on the crosstalk of human gingival fibroblasts (HGFs) and macrophages. <b><i>Methods:</i></b> A total of 70 periodontitis patients with or without diabetes mellitus (DM) were enrolled, and the statistical relationships of diabetic conditions to the periodontal inflammatory parameters were examined by cross-sectional study. In <i>in vitro</i> study, HGFs cell line CRL-2014® (ATCC) and differentiated THP-1 macrophages were cultured with normal glucose (NG: 5.5 mM) or high glucose (HG: 25 mM) condition, and treated with indicated inflammatory factors such as calprotectin (CPT), interleukin (IL)-1β and IL-6. To examine the effects of HG on soluble IL-6 receptor (sIL-6R) production in THP-1 macrophages, the supernatants were collected and the sIL-6R levels were measured by ELISA. To examine the effects of HG on IL-1β or IL-6-induced matrix metalloproteinase (MMPs) production in HGFs, the supernatants were collected. Levels of MMP-1 and tissue inhibitor of MMP-1 (TIMP-1) were measured by ELISA. Finally, after conditioned medium (CM) from THP-1 macrophages cultured with NG or HG conditions was collected, HGFs were treated with the CM. The supernatants were collected 24 hours later and the levels of MMP-1 and TIMP-1 were measured. To examine the specific effects of IL-1β contained in CM on MMP-1 and TIMP-1 production in HGFs, IL-1 receptor antagonist (IL-1ra) was used. <b><i>Results:</i></b> There were statistical correlation between IL-1β and sIL-6R levels in gingival crevicular fluid (GCF) and HbA1c in periodontitis patients with DM (IL-1β: P=0.035, sIL-6R: P=0.040). HG and CPT significantly induced sIL-6R production in THP-1 macrophages. HG significantly enhanced IL-1β or IL-6/sIL-6R-induced MMP-1 production in HGFs. The increase of MMP-1 by both IL-1β and IL-6/sIL-6R was significantly inhibited by specific ERK or IκB inhibitors. Corresponding to the regulation of MMP-1 production, HG condition increased the phosphorylation of p44/42 MAPK and IκBα in HGFs treated with IL-1β or IL-6/sIL-6R. Finally, MMP-1 production in HGFs cultured with HG increased significantly by CM from THP-1 macrophages cultured with HG. The induction of MMP-1 by the CM from THP-1 macrophages cultured with HG was significantly inhibited by dose dependent of IL-1ra in HGFs cultured with HG. <b><i>Conclusion:</i></b> Diabetic conditions such as HG induce IL-1β and sIL-6R production from macrophages in inflammatory periodontal tissues and may exacerbate the periodontitis synergistically via MMP-1 production from HGFs.
DOI: 10.6084/m9.figshare.21608499.v1
title: Supplementary Table 6: Processed quantitative microbiota matrix of day 0, 8, 29, 56.

description: Processed quantitative microbiota matrix of day 0, 8, 29, 56.
DOI: 10.17632/kvwdj99pns
title: Hydrological data via field observations of the Beibu gulf during the Typhoon Sinlaku 

description: A hydrological dataset which contains water level, wave height and wave period at the Beibu gulf in China through a field observation during the Typhoon Sinlaku in 2020. Additionally, the information of the Typhoon Sinlaku and Rammasun were also recorded in this dataset.
DOI: 10.21954/ou.rd.19487840.v2
title: Supplementary-materials-for-RSPA-2021-0726

description: Electronic supplementary materials for “<b>Effect of pulsating solidification on the surface properties of conductive materials</b>”<br> By Rongshan Qin and Ashutosh Bhagurkar School of Engineering and Innovation, The Open University, Walton Hall, Milton Keynes MK7 6AA, United Kingdom<br>
DOI: 10.17632/kmjs5hcwph
title: Stress, anxiety and coping styles during the two waves of the COVID-19 pandemic

description: The data was collected during the first and second waves of the COVID-19 pandemic among students of Opole University of Technology in Poland. The data includes some demographic characteristics of the study sample, as well as standardized psychological questionnaires to assess perceived stress (PSS-10), anxiety (GAD-7) and coping styles (CISS-48). The aim of the study is to examine the Multidimensional Interaction Model of Stress, Anxiety and Coping during the COVID-19 pandemic.