cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.2awu48
title: Occurrence Download

description: A dataset containing 28 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Helcia sanguinolenta Lindl."
 ]
}

 The dataset includes 28 records from 9 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0023954-190918142434337/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.eksn2h
title: Occurrence Download

description: A dataset containing 437 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-78.36182 -47.63916,-76.0669 -53.93799,-67.66113 -57.48535,-56.48682 -53.10791,-47.75208 -26.48499,-47.88117 -25.11597,-49.37653 -24.21051,-49.5221 -22.99378,-51.0846 -22.70081,-53.39173 -22.40784,-54.27063 -23.86047,-55.11963 -23.66455,-55.44068 -22.03735,-57.78443 -21.9397,-57.61353 -20.81665,-58.04932 -19.51416,-60.1001 -18.78174,-61.90003 -19.50256,-62.81372 -21.30493,-64.49829 -22.18384,-66.52466 -21.67114,-67.35474 -22.55005,-67.88147 -21.67542,-67.96692 -19.99085,-69.11255 -17.52075,-69.91455 -17.41455,-70.45166 -18.39111,-78.36182 -47.63916))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Eriocaulon L."
 ]
}

 The dataset includes 437 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0183376-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rpzvu9
title: Occurrence Download

description: A dataset containing 1240 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Elatine macropoda Guss."
 ]
}

 The dataset includes 1240 records from 91 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0131179-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7xr49a
title: Occurrence Download

description: A dataset containing 1228 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is EBCC Atlas of European Breeding Birds",
 "Geometry POLYGON((-66.40220 24.51370,106.91315 24.51370,106.91315 90.00000,-66.40220 90.00000,-66.40220 24.51370))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Bubo bubo (Linnaeus, 1758)"
 ]
}

 The dataset includes 1228 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0164534-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jniwlg
title: Occurrence Download

description: A dataset containing 144 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Specimen"
 ]
 },
 "Country is Brazil",
 "HasCoordinate is true",
 "TaxonKey is Aniba rosaeodora Ducke",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 144 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020118-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.3ae0pv
title: Occurrence Download

description: A dataset containing 238 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Eucalyptus gamophylla F.Muell.",
 {
 "or" : [
 "BasisOfRecord is Human Observation",
 "BasisOfRecord is Observation"
 ]
 },
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 238 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044197-191105090559680/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.fp37sk
title: Occurrence Download

description: A dataset containing 1245 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Spain",
 "TaxonKey is Saxifraga canaliculata Boiss. & Reut. ex Engl."
 ]
}

 The dataset includes 1245 records from 39 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0164538-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.za6y0y
title: Occurrence Download

description: A dataset containing 51 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Miconia robustissima Cogn."
 ]
}

 The dataset includes 51 records from 19 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020105-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jcd6ym
title: Occurrence Download

description: A dataset containing 31302 species occurrences available in GBIF matching the query:
{
 "and" : [
 "OccurrenceStatus is Present",
 "TaxonKey is Mephitis mephitis (Schreber, 1776)"
 ]
}

 The dataset includes 31302 records from 158 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020556-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.973hyq
title: Occurrence Download

description: A dataset containing 16 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Mexico",
 "TaxonKey is Stanhopea pseudoradiosa Jenny & R.Gonzalez"
 ]
}

 The dataset includes 16 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020558-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.n8qkgm
title: Occurrence Download

description: A dataset containing 63 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pristimantis rhodostichus (Duellman & Pramuk, 1999)"
 ]
}

 The dataset includes 63 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020559-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5519/qd.l6twx0pu
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (221 records)
DOI: 10.3886/e209583
title: Monumental effects: Confederate monuments in the Post-Reconstruction South

description: This paper explores the contemporaneous eﬀects of Confederate monuments dedicated in the Post-Reconstruction South. I combine monument, election, and census data to create an election-year panel
dataset of former Confederate counties between 1878–1912, then exploit the temporally staggered and
geographically distributed dedication of monuments using a generalized diﬀerence-in-diﬀerences design.
I find that monuments caused increases in Democratic Party vote share and decreases in voter turnout,
with less robust decreases in Black population share. I find some evidence that more intense monument-building is associated with a decrease in Black lynchings. I also find varying eﬀects based on the era of
monument dedication, the intensity of monument-building, and monument characteristics. To address
potential mechanisms, I present evidence that monuments were associated with increased use of famous
Confederate names for children and show that decreases in voter turnout occurred exclusively in areas
with larger Black population shares. Overall, my results suggest monuments promoted a distorted view
of Civil War history that primarily persuaded southern whites, but also contributed to Black political
suppression. The findings have implications for current debates over Confederate monuments in the
United States.
DOI: 10.3886/e209583v1
title: Monumental effects: Confederate monuments in the Post-Reconstruction South

description: This paper explores the contemporaneous eﬀects of Confederate monuments dedicated in the Post-Reconstruction South. I combine monument, election, and census data to create an election-year panel
dataset of former Confederate counties between 1878–1912, then exploit the temporally staggered and
geographically distributed dedication of monuments using a generalized diﬀerence-in-diﬀerences design.
I find that monuments caused increases in Democratic Party vote share and decreases in voter turnout,
with less robust decreases in Black population share. I find some evidence that more intense monument-building is associated with a decrease in Black lynchings. I also find varying eﬀects based on the era of
monument dedication, the intensity of monument-building, and monument characteristics. To address
potential mechanisms, I present evidence that monuments were associated with increased use of famous
Confederate names for children and show that decreases in voter turnout occurred exclusively in areas
with larger Black population shares. Overall, my results suggest monuments promoted a distorted view
of Civil War history that primarily persuaded southern whites, but also contributed to Black political
suppression. The findings have implications for current debates over Confederate monuments in the
United States.
DOI: 10.5281/zenodo.10854628
title: Data from: The maintenance and emergence of diversity promotes open-ended evolution in a prebiotic context

description: This data was collected during the study entitled “The maintenance and emergence of diversity promotes open-ended evolution in a prebiotic context." We explored how selective contexts shape the evolution of innovation, using in vitro selection with single-stranded DNA (ssDNA) as an empirical model for pre-cellular evolution. During this selection regime, a diverse pool of 76-bp ssDNA (consisting of a random 40-nt region, flanked by 18-nt primer binding sites) was incubated with a target substrate, during which sequences were able to bind to the substrate. Following incubation, unbound sequences were discarded, while bound sequences were partitioned and amplified via PCR and used in subsequent rounds of selection.  Our experimental design consisted of 8 cycles of selection with either streptavidin-coated magnetic beads or yeast cells (Kluyveromyces lactis) as the binding substrate. We also included two variable selection regimes, where four rounds of selection were completed with one substrate before switching to the other target for the remaining four rounds (3 replicate populations per treatment). All replicates from rounds 1, 4, 7, and 8 were purified and submitted for next-generation sequencing (Illumina NovaSeq S4 2x150-bp lane), along with the random starting library. Sequencing generated a mean of 29,741,261 pair-end reads per sample, which were assembled and normalized to ~100,000 reads per sample used for analysis, which are included here. The file names are organized in the following format: Selection Treatment_Round of Selection_Replicate #. For example, “Beads_R1_1” indicates a population that was selected with beads as the binding substrate following Round 1 of selection, replicate population 1 (out of 3 replicates). Scripts used to list contigs (EditFastas.l) and measure the frequencies of each sequence (CountSeqs.l ) are also included.
DOI: 10.5281/zenodo.13944719
title: 【outputs_best_number_tokens_to_tpm_large_scales】/best_number_tokens_log_part_6 (7), only two 8B LLMs, 23 (tpms) = 23 files

description: Part 6 (7)  

only two 8B LLMs,  

only valid results (both MP p value and CI),

all permutation controls,

all seeds,

all linguistic spans,

all 5 tasks, 

23 (tpms) = 23 files
DOI: 10.5281/zenodo.13944720
title: 【outputs_best_number_tokens_to_tpm_large_scales】/best_number_tokens_log_part_6 (7), only two 8B LLMs, 23 (tpms) = 23 files

description: Part 6 (7)  

only two 8B LLMs,  

only valid results (both MP p value and CI),

all permutation controls,

all seeds,

all linguistic spans,

all 5 tasks, 

23 (tpms) = 23 files
DOI: 10.5281/zenodo.13947117
title: Dataset obtained from DoE for the construction of lightweight concrete blocks using expanded polystyrene

description: The dataset used in this study was generated through a Design of Experiments (DOE) approach to predict the material mixture proportions using machine learning techniques. It contains 36 experiments, where the independent variables include the proportions of cement, sand, gravel, and expanded polystyrene (Styrofoam). The dependent variables are the compressive strength values and water absorption rates, calculated across multiple components and used to classify the mixtures.

The dataset columns include:



Cement: The proportion of cement used in the mixture.

Sand: The proportion of sand used.

Gravel: The proportion of gravel.

Styrofoam (Sty): The proportion of expanded polystyrene.

Comp. 1-6: Compressive strength values for different components.

Comp. Mean: The mean compressive strength value.

Abs. 1-3: Water absorption values for different components.

Abs. Mean: The mean water absorption rate.

Classification: The final classification of the mixture based on the obtained results, indicating if the mixture belongs to categories such as "B," "C," "D," or "No classification."


This dataset was used to train and validate machine learning models, aiming to predict the mixture properties based on the material proportions.
DOI: 10.5281/zenodo.13947118
title: Dataset obtained from DoE for the construction of lightweight concrete blocks using expanded polystyrene

description: The dataset used in this study was generated through a Design of Experiments (DOE) approach to predict the material mixture proportions using machine learning techniques. It contains 36 experiments, where the independent variables include the proportions of cement, sand, gravel, and expanded polystyrene (Styrofoam). The dependent variables are the compressive strength values and water absorption rates, calculated across multiple components and used to classify the mixtures.

The dataset columns include:



Cement: The proportion of cement used in the mixture.

Sand: The proportion of sand used.

Gravel: The proportion of gravel.

Styrofoam (Sty): The proportion of expanded polystyrene.

Comp. 1-6: Compressive strength values for different components.

Comp. Mean: The mean compressive strength value.

Abs. 1-3: Water absorption values for different components.

Abs. Mean: The mean water absorption rate.

Classification: The final classification of the mixture based on the obtained results, indicating if the mixture belongs to categories such as "B," "C," "D," or "No classification."


This dataset was used to train and validate machine learning models, aiming to predict the mixture properties based on the material proportions.
DOI: 10.6084/m9.figshare.25858897
title: Celebrating Thomas van der Hammen’s 100th anniversary: contributions of an explorer palynologist to neotropical paleoecology

description: We celebrate the 100<sup>th</sup> anniversary of Thomas Van der Hammen (1924–2010). His career is a model of explorative environmental research in nearly all ecosystems of northern South America. He introduced palynological research into South America. As a PhD student he studied changes of climate, vegetation and landscape during the Lateglacial in Twente, eastern Netherlands. He continued his career in 1952 at the Geological Survey of Colombia with research, and teaching palynology and palaeobotany. He studied sediment archives from the Cretaceous to the Quaternary palynologically. He explored the potential of developing an understanding of the Quaternary history of neotropical ecosystems, the response to ice-ages in particular. In 1959 he returned to Leiden University where he succeeded professor Florschütz. In 1966 he was appointed at the University of Amsterdam and continued training Colombian and Dutch PhD students in studying the history of climate, flora and vegetation of northern South America, Amazonia and the Netherlands. He organised unparalleled transect studies through the Colombian Andes and collected a wealth of evidence in support of an elevational sequence of biodiversity. During decades Thomas skilfully used opportunities for research in academia as well as in industry. He gave structure for research at universities, municipalities, musea, ministries, and nature conservations. After his retirement he lived in Colombia. His country estate became a central meeting place where students, scientists, farmers, mayors, and even Ministers of State discussed the environmental past and future of Colombian ecosystems.
DOI: 10.6084/m9.figshare.25858897.v2
title: Celebrating Thomas van der Hammen’s 100th anniversary: contributions of an explorer palynologist to neotropical paleoecology

description: We celebrate the 100<sup>th</sup> anniversary of Thomas Van der Hammen (1924–2010). His career is a model of explorative environmental research in nearly all ecosystems of northern South America. He introduced palynological research into South America. As a PhD student he studied changes of climate, vegetation and landscape during the Lateglacial in Twente, eastern Netherlands. He continued his career in 1952 at the Geological Survey of Colombia with research, and teaching palynology and palaeobotany. He studied sediment archives from the Cretaceous to the Quaternary palynologically. He explored the potential of developing an understanding of the Quaternary history of neotropical ecosystems, the response to ice-ages in particular. In 1959 he returned to Leiden University where he succeeded professor Florschütz. In 1966 he was appointed at the University of Amsterdam and continued training Colombian and Dutch PhD students in studying the history of climate, flora and vegetation of northern South America, Amazonia and the Netherlands. He organised unparalleled transect studies through the Colombian Andes and collected a wealth of evidence in support of an elevational sequence of biodiversity. During decades Thomas skilfully used opportunities for research in academia as well as in industry. He gave structure for research at universities, municipalities, musea, ministries, and nature conservations. After his retirement he lived in Colombia. His country estate became a central meeting place where students, scientists, farmers, mayors, and even Ministers of State discussed the environmental past and future of Colombian ecosystems.
DOI: 10.6084/m9.figshare.25858897.v1
title: Celebrating Thomas van der Hammen’s 100<sup>th</sup> anniversary: contributions of an explorer palynologist to neotropical paleoecology

description: We celebrate the 100<sup>th</sup> anniversary of Thomas Van der Hammen (1924-2010). His career is a model of explorative environmental research in nearly all ecosystems of northern South America. He introduced palynological research into South America. As a PhD student he studied changes of climate, vegetation and landscape during the Lateglacial in Twente, eastern Netherlands. He continued his career in 1952 at the Geological Survey of Colombia with research and teaching palynology and paleobotany. He studied sediment archives from Cretaceous to the Quaternary age palynologically. He explored the potential of developing an understanding of the Quaternary history of neotropical ecosystems, the response to ice ages in particular. In 1959 he returned to Leiden University where he succeeded professor Florschütz. In 1966 he was appointed at the University of Amsterdam and continued training Colombian and Dutch PhD students in studying the history of climate, flora and vegetation of northern South America, Amazonia and the Netherlands. He organized unparalleled transect studies through the Colombian Andes and collected a wealth of evidence in support of an elevational sequence of biodiversity. During decades Thomas skilfully used opportunities for research in academia as well as in industry. He gave structure for research at universities, municipalities, musea, ministries, and nature conservations. After his retirement he lived in Colombia. His country estate became a central meeting place where students, scientists, farmers, mayors, and even Ministers of State discussed the environmental past and future of Colombian ecosystems.
DOI: 10.15468/dl.4anseb
title: Occurrence Download

description: A dataset containing 8783 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Pycnopodia helianthoides (Brandt, 1835)"
 ]
}

 The dataset includes 8783 records from 51 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0020561-241007104925546/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24051030.v1
title: Chalcones reloaded: an integration of network pharmacology and molecular docking for type 2 diabetes therapy

description: Chalcones have various biological effects, from immune boosting to anti-cancer and anti-diabetic. Structurally modified chalcones (SMC) are clinically relevant for diabetes and cardiometabolic complications. From the original research articles, a structurally proven and biologically outstanding 14 structurally modified chalcones were screened and inducted in this study. This study evaluated the effects of SMC towards diabetes <i>via</i> network pharmacology analysis. The network data shows compounds S2, S3, S5, S9 &S12 suit the diabetes target. Especially Compounds S5 and S9 have a higher binding affinity towards the targets of TNF, PI3K, MAPK1 and AKT1 active sites. Compound S9 [(E)-3-(4-(1H-imidazol-1-yl)phenyl)-1-(4-(2,4-difluorobenz-yloxy)phenyl)prop-2-en-1-one] have identified with stronger binding affinities towards the active sites of MAPK3 (PDB:4QTB) −10.5(Kcal/mol). To provide a more effective mechanism for demonstrating protein-ligand interaction, one of the molecular docking complex (ERK2 kinase-S5) was subjected to a molecular dynamic at 300K for 100 ns. In term of structural stability, structure compactness, residual flexibility and hydrogen bond interaction of the complex was evaluated Integrating network pharmacology, <i>in silico</i> virtual screening, and molecular docking analysis shows that structurally modified compounds are effective and may help identify lead compounds towards glycemic control. Communicated by Ramaswamy H. Sarma