cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5061/dryad.hmgqnk9jv
title: Diversity investigation by application of DNA barcoding: a case study of lepidopteran insects in Xinjiang wild fruit forests, China

description: To investigate the species diversity of lepidopteran insects in Xinjiang
 wild fruit forests, establish insect community monitoring systems and
 determine the local species pool, we test the applicability of DNA
 barcoding based on cytochrome c oxidase subunit I (COI) gene for accurate
 and rapid identification of insect species. From 2017 to 2019, a total of
 212 samples with ambiguous morphological identification were selected for
 DNA barcoding analysis. Five sequence-based methods for species
 delimitation (ABGD, BINs, GMYC, jMOTU and bPTP) were conducted for
 comparison to traditional morphology-based identification. In total, 2,422
 samples were recorded, representing 143 species of 110 genera in 17
 families in Lepidoptera. The diversity analysis showed that the richness
 indices for Noctuidae was the highest (54 species), and for Pterophoridae,
 Cossidae, Limacodidae, Lasiocampidae, Pieridae and Lycaenidae were the
 lowest (all with 1 species). The Shannon-Wiener species diversity index
 (H') and Pielou’s evenness (J') of lepidopteran insects first
 increased and then decreased across these three years, while the Simpson
 diversity index showed a trend of subtracted-then-added. For
 molecular-based identification, 67 lepidopteran species within 61 genera
 in 14 families were identified through DNA barcoding. Neighbor Joining
 (NJ) analysis showed that conspecific individuals were clustered together
 and formed monophyletic groups with a high support value, except for
 Lacanobia contigua (Denis & Schiffermüller, 1775) (Noctuidae:
 Hadeninae). Sixty-seven morphospecies were classified into various numbers
 of MOTUs based on ABGD, BINs, GMYC, jMOTU and bPTP (70, 96, 2, 71, and 71,
 respectively). In Xinjiang wild fruit forests, the family with the largest
 number of species is Noctuidae, followed by Geometridae, Crambidae, and
 the remaining families. The highest Shannon diversity index is observed
 for the family Noctuidae. Our results indicate that the distance-based
 methods (ABGD and jMOTU) and character-based method (bPTP) outperform
 GMYC. BINs is inclined to overestimate species diversity compared to other
 methods.
description: Diversity indices were
 analyzed following Subedi et al. (2021). Traditonal morphological methods
 were used for species identification. Ambiguous morphological
 identification were assigned through a
 similarity search against the GenBank public database
 (https://www.ncbi.nlm.nih.gov/) and BOLD system (Barcode of Life Data
 System) (http://www.boldsystems.org/) based on DNA barcodes.
DOI: 10.5061/dryad.cvdncjt63
title: Cytosolic peptides encoding CaV1 C-termini downregulate the calcium channel activity-neuritogenesis coupling

description: L-type Ca2+ (CaV1) channels transduce channel activities into nuclear
 signals critical to neuritogenesis. Also, standalone peptides encoded by
 CaV1 DCT (distal carboxyl-terminus) act as nuclear transcription factors
 reportedly promoting neuritogenesis. Here, by focusing on exemplary CaV1.3
 and cortical neurons under basal conditions, we discover that cytosolic
 DCT peptides downregulate neurite outgrowth by the interactions with
 CaV1’s apo-calmodulin binding motif. Distinct from nuclear DCT, various
 cytosolic peptides exert a gradient of inhibitory effects on Ca2+ influx
 via CaV1 channels and neurite extension and arborization, and also the
 intermediate events including CREB activation and c-Fos expression. The
 inhibition efficacies of DCT are quantitatively correlated with its
 binding affinities. Meanwhile, cytosolic inhibition tends to facilitate
 neuritogenesis indirectly by favoring Ca2+-sensitive nuclear retention of
 DCT. In summary, DCT peptides as a class of CaV1 inhibitors specifically
 regulate the channel activity-neuritogenesis coupling in a variant-,
 affinity-, and localization-dependent manner.
description: Please see README file.
description: Please see README file.
DOI: 10.15468/dl.u27j9v
title: Occurrence Download

description: A dataset containing 12905 records in GBIF matching the query:
SELECT
 '470' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= 46.479780028101516
 AND decimalLatitude &lt;= 51.21395264452012
 AND decimalLongitude &gt;= -60.13294214751847
 AND decimalLongitude &lt;= -50.355184734369665
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 12905 records were derived from 106 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003062-260126135527185/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5061/dryad.612jm6454
title: Abundance predominates over niche factors as determinant of the frequency of interactions between frugivorous birds and plants

description: Neutral and niche factors influence the structure of frugivory and seed
 dispersal networks. While the former refers to the abundance of
 interacting species, niche factors refer to traits that mediate
 interactions between species (e.g., morphology). The challenge is to
 unravel in which circumstances one kind of factor predominates over the
 other, or how much variation is explained by each factor. We investigated
 the relative contributions of abundance and trait-matching (considering
 fruit’s size, pulp mass to seed mass ratio, and lipid content, and bird’s
 degree of frugivory, body mass, and gape width) as drivers of the
 frequency of interactions between frugivorous birds and fleshy fruits in
 an area of Cerrado second-growth vegetation in Brazil. We expected that
 the abundance of species would be the most important factor due to the
 predominance of common small-bodied generalist bird species and
 small-seeded fleshy-fruited plants. Species abundance was indeed an
 important factor explaining interactions, although in limited fashion.
 This is because niche factors also helped to explain bird-plant
 interaction frequencies in the community, particularly the mass ratio of
 fruits and, to a lesser extent, their lipid content through its
 interaction with abundance and its negative correlation with mass ratio.
 In addition to the importance of both bird and plant abundances, these
 results underscore the role played by plant functional traits in
 maintaining community function and ecosystem services even in habitats
 dominated by common generalist birds and small-seeded plants.
description: From August to December 2018,
 we recorded frugivory by birds in a
 1.5-ha plot subdivided in 10 x 10 m cells established at
 an area of second growth Cerrado vegetation in
 Rio Claro, São Paulo, Brazil (22° 23’ 38.65” S, 47°32’25.70” W; 620 m
 a.s.l.). At least once a week, observers recorded bird frugivory for 3-4
 h, beginning shortly after sunrise for a total observation effort of 285
 h. The plot cell where we started looking for frugivory events was
 randomized each morning. 
description: Each line in the dataset corresponds to one interaction.
DOI: 10.15468/dl.tnrsqs
title: Occurrence Download

description: A dataset containing 17345 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Ophiopogon"
 ]
}

 The dataset includes 17345 records from 344 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009254-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k2exuq
title: Occurrence Download

description: A dataset containing 76 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Linaria tonzigii"
 ]
}

 The dataset includes 76 records from 16 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009256-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.18348121
title: Adjusted transmission overhead lines data to test algorithms of lightning incidence

description: The dataset contains detailed data on transmission system elements such as towers, lines, insulators, and wiresso that they can be used for automatic verification of proposed methods for lightning strikes on overhead lines.
DOI: 10.5281/zenodo.18348122
title: Adjusted transmission overhead lines data to test algorithms of lightning incidence

description: The dataset contains detailed data on transmission system elements such as towers, lines, insulators, and wiresso that they can be used for automatic verification of proposed methods for lightning strikes on overhead lines.
DOI: 10.15468/dl.sssqfg
title: Occurrence Download

description: A dataset containing 3762 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cotula coronopifolia",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 3762 records from 207 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009257-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.q8y2uv
title: Occurrence Download

description: A dataset containing 1 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Cousinia moabitica",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 1 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009258-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.xkhhyj
title: Occurrence Download

description: A dataset containing 35 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Continent is Asia",
 "Country is China",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Malus asiatica",
 "Year 1960-2010"
 ]
}

 The dataset includes 35 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009259-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.epz5sj
title: Occurrence Download

description: A dataset containing 1692 records in GBIF matching the query:
SELECT
 '287' AS fish_cell,
 GBIF_MGRSCode(1000, decimalLatitude, decimalLongitude, 0) AS cell, -- NO randomization
 COUNT(DISTINCT speciesKey) AS species_richness
 FROM occurrence
 WHERE hasCoordinate = TRUE
 AND speciesKey IS NOT NULL
 AND NOT ARRAY_CONTAINS(issue, 'ZERO_COORDINATE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_OUT_OF_RANGE')
 AND NOT ARRAY_CONTAINS(issue, 'COORDINATE_INVALID')
 AND NOT ARRAY_CONTAINS(issue, 'COUNTRY_COORDINATE_MISMATCH')
 AND decimalLatitude &gt;= 20.3845909579754
 AND decimalLatitude &lt;= 24.552553756517728
 AND decimalLongitude &gt;= 36.34611705288414
 AND decimalLongitude &lt;= 42.32036756184146
 AND "year" &gt;= 2015
 AND "year" &lt;= 2026
 AND (coordinateUncertaintyInMeters &lt;= 100 OR coordinateUncertaintyInMeters IS NULL)
 GROUP BY fish_cell, cell

 The dataset's 1692 records were derived from 37 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009253-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mbad7b
title: Occurrence Download

description: A dataset containing 4373 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is France",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Parus major",
 "Year 2025-2025"
 ]
}

 The dataset includes 4373 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009260-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.797zv9
title: Occurrence Download

description: A dataset containing 566 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Craspedia aurantia",
 "HasCoordinate is true",
 "BasisOfRecord is one of (Specimen)"
 ]
}

 The dataset includes 566 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009261-260120142942310/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26314738
title: Mucosal effects of tenofovir 1% gel wane over longer-term use but retain pro-proliferative and type I/III interferon pathway signatures: Proteomics from MTN-017

description: The purpose of this data set was to measure how the expression of proteins in rectal biopsies is affected by use of topical tenofovir gel or oral Truvada for prevention of HIV infection. Proteins were measured by mass spectrometry from samples taken from the MTN-017 study at baseline and after 56 days of treatment.In the raw_data tab, each row is a sample. There are several columns describing each sample and then many columns containing the expression level for each detected protein. Expression levels were adjusted for batch effects using ComBat.In the data_dictionary tab, the columns of the raw_data tab are explained.In the protein_lookup tab, there is one row per protein detected, mapping from UniProt ID to gene symbol and Entrez Gene ID.
DOI: 10.6084/m9.figshare.26314738.v1
title: Mucosal effects of tenofovir 1% gel wane over longer-term use but retain pro-proliferative and type I/III interferon pathway signatures: Proteomics from MTN-017

description: The purpose of this data set was to measure how the expression of proteins in rectal biopsies is affected by use of topical tenofovir gel or oral Truvada for prevention of HIV infection. Proteins were measured by mass spectrometry from samples taken from the MTN-017 study at baseline and after 56 days of treatment.In the raw_data tab, each row is a sample. There are several columns describing each sample and then many columns containing the expression level for each detected protein. Expression levels were adjusted for batch effects using ComBat.In the data_dictionary tab, the columns of the raw_data tab are explained.In the protein_lookup tab, there is one row per protein detected, mapping from UniProt ID to gene symbol and Entrez Gene ID.
DOI: 10.5281/zenodo.15579720
title: Autonomy and Intrinsic Motivation in e-Learning: The Moderating Effects of Age and Gender

description: Data inlude 2,566 undergraduate students enrolled in open education programs. Independent variables are age and gender. Dependent variables are learning autonomy and intrinsic motivation.
DOI: 10.5281/zenodo.15579721
title: Autonomy and Intrinsic Motivation in e-Learning: The Moderating Effects of Age and Gender

description: Data inlude 2,566 undergraduate students enrolled in open education programs. Independent variables are age and gender. Dependent variables are learning autonomy and intrinsic motivation.
DOI: 10.18739/a20863731
title: National Oceanic and Atmospheric Administration/ National Snow and Ice Data Center (NOAA/NSIDC) Climate Data Record of Passive Microwave Sea Ice Concentration, Version 4

description: This data set provides a Climate Data Record (CDR) of sea ice concentration from passive microwave data. The CDR algorithm output is a rule-based combination of ice concentration estimates from two well-established algorithms: the NASA Team (NT) algorithm (Cavalieri et al. 1984) and NASA Bootstrap (BT) algorithm (Comiso 1986). The CDR is a consistent, daily and monthly time series of sea ice concentrations from 25 October 1978 through the most recent processing for both the north and south polar regions. All data are on a 25 kilometer (km) x 25 km grid. Note: A near-real-time version of this data set also exists to fill the gap between the time that this data set is updated through to the present. The data set is called the Near-Real-Time National Oceanic and Atmospheric Administration/ National Snow and Ice Data Center (NOAA/NSIDC) Climate Data Record of Passive Microwave Sea Ice Concentration (https://nsidc.org/data/g10016).
 Citation: Meier, W. N., F. Fetterer, A. K. Windnagel, and S. Stewart. 2021. NOAA/NSIDC Climate Data Record of Passive Microwave Sea Ice Concentration, Version 4. [Indicate subset used]. Boulder, Colorado USA. NSIDC: National Snow and Ice Data Center https://doi.org/10.7265/efmz-2t65. [Date Accessed].
DOI: 10.34740/kaggle/dsv/11886111
title: Peer-to-Peer Boliviano (BOB) Exchange Data
DOI: 10.15468/dl.qz5zbg
title: Occurrence Download

description: A dataset containing 20742 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Brazil",
 "TaxonKey is Tracheophyta",
 "Year is 2025"
 ]
}

 The dataset includes 20742 records from 52 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009868-250515123054153/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15557745
title: Congo Peatland moth trap data
DOI: 10.5281/zenodo.15557746
title: Congo Peatland moth trap data
DOI: 10.15468/dl.nvbhz5
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Holtbyrnia macrops Maul, 1957",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((26.9648 -7.1504,17.9648 -7.1504,17.9648 -16.1504,26.9648 -16.1504,26.9648 -7.1504))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0010164-250525065834625/datasets/export for details.
DOI: 10.15468/dl.ghb2eh
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fundulus lineolatus",
 "HasCoordinate is true",
 "Geometry POLYGON((-78 12, -73 12, -73 0, -78 0, -78 12))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034462-251025141854904/datasets/export for details.
DOI: 10.15468/dl.nf4guu
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-107.5188 23.09913, -107.3688 23.09913, -107.3688 23.24913, -107.5188 23.24913, -107.5188 23.09913))"
 ]
}

 The dataset includes 7 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034463-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2cukpx
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is The freshwater molluscs of Serbia: Annotated checklist with remarks on distribution and protection status"
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034464-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.72qmxj
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Fundulus notatus",
 "HasCoordinate is true",
 "Geometry POLYGON((-78 12, -73 12, -73 0, -78 0, -78 12))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034465-251025141854904/datasets/export for details.
DOI: 10.15468/dl.yy3t75
title: Occurrence Download

description: A dataset containing 3 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((-107.3688 23.09913, -107.2188 23.09913, -107.2188 23.24913, -107.3688 23.24913, -107.3688 23.09913))"
 ]
}

 The dataset includes 3 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034466-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k8rmjj
title: Occurrence Download

description: A dataset containing 499241 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "Year is greater than or equal to 1980",
 "TaxonKey is Acer campestre"
 ]
}

 The dataset includes 499241 records from 2449 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0034433-251025141854904/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.