cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.34808/dr5j-w230
title: Neuroendocrine carcinoma, NOS - Female, 69 - Tissue image [530073002587121]

description: This is the histopathological image of LIVER AND INTRAHEPATIC BILE DUCTS tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 69Clinical description: Tumors of liver. Suspicion of metastases.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Neuroendocrine carcinoma, NOSResult of the histopathological examination: Metastasis of neuroendocrine carcinoma (probably from lung) to liver: CKAE1/AE3+ (dot-like), SYN+, CHR weak +, TTF1+, Ki-67 90%.Sample:Material: FFPECollecting method: Core-needle biopsyTopography: DIGESTIVE ORGANSOrgan: LIVER AND INTRAHEPATIC BILE DUCTSTissue: LiverType of staining: positive/IHCStaining: Not applicableAntibody: CK PAN (AE1/AE3)Technology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.6084/m9.figshare.9956804
title: Maturation of early-ripening mandarin as affected by scion and rootstock cultivars in western Santa Catarina, Brazil

description: ABSTRACT In Santa Catarina, Brazil, ‘Satsuma Okitsu’ and the ‘common mandarin' (Citrus deliciosa Ten.) are the widely known mandarin varieties harvested earlier than 'Ponkan'. This study analyzed and compared the maturation evolution of early maturing mandarins in two rootstocks. The experiment had as treatments combinations of the scion cultivars SCS458 Osvino, Clemenules, Satsuma Okitsu and Mexirica do Rio IAC and the rootstocks ‘Swingle’ and ‘IAC 387 Carrizo’. Fruit were sampled during ripening to evaluate soluble solids (SS), total acidity (TA), ratio (SS/TA), juice content and skin color (CIE Lab parameters and color index - CI). Treatments were compared by analysis of variance and linear and nonlinear modeling. Scions significantly affected the evaluated variables, but no rootstock effect was found. ‘SCS458 Osvino’ showed earlier ratio and, mainly, CI, but its juice content was low in part of the period. ‘Satsuma Okitsu’ and ‘Clemenules’ presented, early, higher CI and ratio than ‘Mexirica do Rio IAC’. In conclusion, the cultivars SCS458 Osvino, Satsuma Okitsu and Clemenules are more precocious in maturation compared to ‘Mexirica do Rio IAC’, and the first is the most precocious in peel maturation.
DOI: 10.6084/m9.figshare.9956804.v1
title: Maturation of early-ripening mandarin as affected by scion and rootstock cultivars in western Santa Catarina, Brazil

description: ABSTRACT In Santa Catarina, Brazil, ‘Satsuma Okitsu’ and the ‘common mandarin' (Citrus deliciosa Ten.) are the widely known mandarin varieties harvested earlier than 'Ponkan'. This study analyzed and compared the maturation evolution of early maturing mandarins in two rootstocks. The experiment had as treatments combinations of the scion cultivars SCS458 Osvino, Clemenules, Satsuma Okitsu and Mexirica do Rio IAC and the rootstocks ‘Swingle’ and ‘IAC 387 Carrizo’. Fruit were sampled during ripening to evaluate soluble solids (SS), total acidity (TA), ratio (SS/TA), juice content and skin color (CIE Lab parameters and color index - CI). Treatments were compared by analysis of variance and linear and nonlinear modeling. Scions significantly affected the evaluated variables, but no rootstock effect was found. ‘SCS458 Osvino’ showed earlier ratio and, mainly, CI, but its juice content was low in part of the period. ‘Satsuma Okitsu’ and ‘Clemenules’ presented, early, higher CI and ratio than ‘Mexirica do Rio IAC’. In conclusion, the cultivars SCS458 Osvino, Satsuma Okitsu and Clemenules are more precocious in maturation compared to ‘Mexirica do Rio IAC’, and the first is the most precocious in peel maturation.
DOI: 10.34808/y2rf-1n16
title: Intradermal nevus - Female, 47 - Tissue image [5300730025861351]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 47Clinical description: 1,8 x 1,4 x 0,4 cm light brown lesion of skin of inguinal area.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: NEVI AND MELANOMASDiagnosis: Intradermal nevusResult of the histopathological examination: Dermal melanocytic neavi.Sample:Material: FFPECollecting method: Excision of lesionsTopography: SKINOrgan: SKINTissue: Skin of inguinal regionType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/0kkm-4165
title: Viral warts - Female, 79 - Tissue image [5300730025895411]

description: This is the histopathological image of SKIN tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 79Clinical description: 1,0 x 0,8 x 0,3 cm light brown elevated lesion of skin of finger.Gender: FemaleDiagnosis:Classification: ICD-10_10-20Classification code: Chapter I - Certain infectious and parasitic diseasesDiagnosis: Viral wartsResult of the histopathological examination: Viral wart.Sample:Material: FFPECollecting method: Excision of lesionsTopography: SKINOrgan: SKINTissue: Skin of fingerType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/bx3e-n370
title: Chromophobe cell renal carcinoma - Male, 36 - Tissue image [5300730025878261]

description: This is the histopathological image of KIDNEY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 36Clinical description: Tumor of left kidney.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Chromophobe cell renal carcinomaResult of the histopathological examination: Chromophobe cell renal cell carcinoma: CK7+, CD117+, VIM-.Sample:Material: FFPECollecting method: Surgical specimenTopography: URINARY TRACTOrgan: KIDNEYTissue: Kidney, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/ds1e-yd25
title: Merkel cell carcinoma, metastatic - Female, 74 - Tissue image [5300730025874401]

description: This is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 74Clinical description: History of Merkel cell carcinoma. 4 cm tumor of right groin.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Merkel cell carcinoma, metastaticResult of the histopathological examination: Merkel cell carcinoma, metastatic: CK20+, SYN+, CHR focally +, TTF1-, LCA-, Ki-67 70%.Sample:Material: FFPECollecting method: Core-needle biopsyTopography: LYMPH NODESOrgan: LYMPH NODESTissue: Inguinal lymph nodeType of staining: positive/IHCStaining: Not applicableAntibody: Chromogranin ATechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.6084/m9.figshare.9957164
title: Morphological characterization of Coelogyne spp for germplasm conservation of orchids

description: ABSTRACT Orchid is one of the ornamental plant that has a high aesthetic value. Efforts to increase the quality of orchids can be done by genetic improvement through crossing. The first step to success in orchid crossing requires information on morphological characters of the prospective parents. This study aims to determine the similarity of six species of natural Coelogyne spp based on qualitative morphological characters. Morphological characterization of 6 orchids was carried out based on 30 characters including stem, leaf, flower, pseudobulb, and rooting type. Cluster analysis was carried out with the NTSYSpc program version 2.02i with the UPGMA SimQual function method. The results showed that there were morphological diversities among the six Coelogyne spp on the character of the stem, pseudobulb, leaves, flowers and type of roots. Based on the dendrogram on 73% similarity, three major groups were obtained. The first group consisted of Coelogyne pandurata and Coelogyne rumphii, the second group was C. massangeana, C. mayeriana and C asperata, the third group was C. celebensis. Based on the morphological similarity of 87% there are two pairs of parents that have most successful chance to be crossed, C. pandurata with C. rumphii and C. mayeriana with C. asperata.
DOI: 10.6084/m9.figshare.9957164.v1
title: Morphological characterization of Coelogyne spp for germplasm conservation of orchids

description: ABSTRACT Orchid is one of the ornamental plant that has a high aesthetic value. Efforts to increase the quality of orchids can be done by genetic improvement through crossing. The first step to success in orchid crossing requires information on morphological characters of the prospective parents. This study aims to determine the similarity of six species of natural Coelogyne spp based on qualitative morphological characters. Morphological characterization of 6 orchids was carried out based on 30 characters including stem, leaf, flower, pseudobulb, and rooting type. Cluster analysis was carried out with the NTSYSpc program version 2.02i with the UPGMA SimQual function method. The results showed that there were morphological diversities among the six Coelogyne spp on the character of the stem, pseudobulb, leaves, flowers and type of roots. Based on the dendrogram on 73% similarity, three major groups were obtained. The first group consisted of Coelogyne pandurata and Coelogyne rumphii, the second group was C. massangeana, C. mayeriana and C asperata, the third group was C. celebensis. Based on the morphological similarity of 87% there are two pairs of parents that have most successful chance to be crossed, C. pandurata with C. rumphii and C. mayeriana with C. asperata.
DOI: 10.6084/m9.figshare.9957305
title: Selection gain and interrelations between agronomic traits in wheat F5 genotypes

description: ABSTRACT This work aimed to estimate the variance components and genetic parameters, the selection gain, and the cause and effect relationships among traits in order to identify important traits for direct and indirect selection of wheat (Triticum aestivum L.) lines. Three strategies were used to obtain selection gains: direct and indirect selection, an index based on “ranks,” and the Smith and Hazel index. In the 2017 crop season in Brazil, 420 wheat lines from the F5 generation were conducted in families with intercalary controls. High heritability of spike weight, number of kernels, and total kernel weight resulted in the best direct selection gains. The selection of plants with a high number of tillers resulted in grain yield improvement. The use of selection indexes is important in advanced wheat lines; they promote genetic gains distributed among agronomic traits.
DOI: 10.6084/m9.figshare.9957305.v1
title: Selection gain and interrelations between agronomic traits in wheat F5 genotypes

description: ABSTRACT This work aimed to estimate the variance components and genetic parameters, the selection gain, and the cause and effect relationships among traits in order to identify important traits for direct and indirect selection of wheat (Triticum aestivum L.) lines. Three strategies were used to obtain selection gains: direct and indirect selection, an index based on “ranks,” and the Smith and Hazel index. In the 2017 crop season in Brazil, 420 wheat lines from the F5 generation were conducted in families with intercalary controls. High heritability of spike weight, number of kernels, and total kernel weight resulted in the best direct selection gains. The selection of plants with a high number of tillers resulted in grain yield improvement. The use of selection indexes is important in advanced wheat lines; they promote genetic gains distributed among agronomic traits.
DOI: 10.6084/m9.figshare.9957320
title: Efficacy and selectivity of alternative herbicides to glyphosate on maize

description: ABSTRACT The aim was to evaluate the selectivity and weed control of herbicides atrazine, nicosulfuron, mesotrione and tembotrione, applied alone and associated, in post-emergence of maize. Were carried out two experiments, one in the field in a randomized complete block design with four replications and eleven treatments, the second in greenhouse in a completely randomized design, with four replications and ten treatments. The treatments were composed of isolated and associated herbicides. Treatments were applied V4 stage of plants. For first experiment, crop injury and control evaluations were performed, as well as variables related to agronomic performance (plant height, ear insertion height, prolificacy index, yield and mass of 1,000 grains) and mass of weeds. For second experiment, evaluations of crop injury, height, diameter and dry mass of plants were performed. The lower yield for experiment one was verified in the treatment where only mesotrione was applied, which was attributed to the lower control of monocotyledons weeds. Crop injury were observed at 21 DAA in both experiments, but not exceeding 7.5%. All treatments were considered selective to maize. The herbicides atrazine, nicosulfuron, mesotrione and tembotrione, at associations, were effective in the weed control, except the association atrazine + mesotrione.
DOI: 10.6084/m9.figshare.9957320.v1
title: Efficacy and selectivity of alternative herbicides to glyphosate on maize

description: ABSTRACT The aim was to evaluate the selectivity and weed control of herbicides atrazine, nicosulfuron, mesotrione and tembotrione, applied alone and associated, in post-emergence of maize. Were carried out two experiments, one in the field in a randomized complete block design with four replications and eleven treatments, the second in greenhouse in a completely randomized design, with four replications and ten treatments. The treatments were composed of isolated and associated herbicides. Treatments were applied V4 stage of plants. For first experiment, crop injury and control evaluations were performed, as well as variables related to agronomic performance (plant height, ear insertion height, prolificacy index, yield and mass of 1,000 grains) and mass of weeds. For second experiment, evaluations of crop injury, height, diameter and dry mass of plants were performed. The lower yield for experiment one was verified in the treatment where only mesotrione was applied, which was attributed to the lower control of monocotyledons weeds. Crop injury were observed at 21 DAA in both experiments, but not exceeding 7.5%. All treatments were considered selective to maize. The herbicides atrazine, nicosulfuron, mesotrione and tembotrione, at associations, were effective in the weed control, except the association atrazine + mesotrione.
DOI: 10.34808/5rpt-0a37
title: Oncocytoma - Female, 56 - Tissue image [5300730025865881]

description: This is the histopathological image of KIDNEY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 56Clinical description: Tumor of kidney.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: OncocytomaResult of the histopathological examination: Oncocytoma of kidney: CKAE1/AE3+, e-cadherin+, CD117+, CK7 single cells +, RCC-, Ki-67 1%.Sample:Material: FFPECollecting method: Excision of lesionsTopography: URINARY TRACTOrgan: KIDNEYTissue: Kidney, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/jrx6-sy12
title: Papillary renal cell carcinoma - Male, 68 - Tissue image [5300730025877381]

description: This is the histopathological image of KIDNEY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 68Clinical description: 4,7 x 3,4 x 2,4 cm tumor of left kidney.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Papillary renal cell carcinomaResult of the histopathological examination: Papillary renal cell carcinoma of kidney (type1): CK7+, CK19 focally+, CK8/18+, VIM+, AMACR+, RCC+, MUC1-, CD117-.Sample:Material: FFPECollecting method: Surgical specimenTopography: URINARY TRACTOrgan: KIDNEYTissue: Kidney, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/3bs6-6a78
title: Chromophobe cell renal carcinoma - Male, 36 - Tissue image [530073002587941]

description: This is the histopathological image of KIDNEY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 36Clinical description: Tumor of left kidney.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Chromophobe cell renal carcinomaResult of the histopathological examination: Chromophobe cell renal cell carcinoma: CK7+, CD117+, VIM-.Sample:Material: FFPECollecting method: Surgical specimenTopography: URINARY TRACTOrgan: KIDNEYTissue: Kidney, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/anj7-8h60
title: Brenner tumor, NOS - Female, 71 - Tissue image [5300730025896741]

description: This is the histopathological image of OVARY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 71Clinical description: Tumor of right ovary.Gender: FemaleDiagnosis:Classification: ICD-O_3.2Classification code: FIBROEPITHELIAL NEOPLASMSDiagnosis: Brenner tumor, NOSResult of the histopathological examination: Benign Brenner tumor and seromucinous cystadenoma of ovary.Sample:Material: FFPECollecting method: Surgical specimenTopography: FEMALE GENITAL ORGANSOrgan: OVARYTissue: OvaryType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 250 3DHistechLens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.34808/wvsk-nj56
title: Clear cell renal cell carcinoma, NOS - Male, 57 - Tissue image [5300730025873421]

description: This is the histopathological image of KIDNEY tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 1000 slide scanner (20x magnification) and saved to DICOM format. The detailed information about the patient, sample, and diagnosis are as follows: Patient:Age: 57Clinical description: 9 x 7 x 7 cm tumor of right kidney.Gender: MaleDiagnosis:Classification: ICD-O_3.2Classification code: ADENOMAS AND ADENOCARCINOMASDiagnosis: Clear cell renal cell carcinoma, NOSResult of the histopathological examination: Clear cell renal cell carcinoma of kidney (G2 WHO/ISUP Nuclear Grading System).Sample:Material: FFPECollecting method: Surgical specimenTopography: URINARY TRACTOrgan: KIDNEYTissue: Kidney, NOSType of staining: positive/HEStaining: Not applicableAntibody: Not applicableTechnology:Equipment: Pannoramic 1000Lens: 20xOrganization:Source: Medical University Gdańsk
DOI: 10.6084/m9.figshare.9957146
title: Spatial and temporal distribution of South American fruit fly in vineyards

description: ABSTRACT The South American fruit fly Anastrepha fraterculus (Wied., 1830) is one of the major insect pests of economic importance in vineyards of Southern Brazil. Understanding species behavior and knowing the moments when their population peaks occur can help producers and technicians to define management strategies. This work was carried out the spatial and temporal distribution of the A. fraterculus in two commercial vineyards of variety ‘Moscato Branco’ for two crop seasons. To evaluate the A. fraterculus distribution, we used the mass trapping system with handmade traps (transparent plastic bottles of polyethylene terephthalate - PET), baited with hydrolyzed protein CeraTrap™. The evaluations were performed every two weeks, counting the total number of adults found per trap in each vineyard. From the number of insects caught per trap, data analysis was performed using geostatistics, through semivariograms. The spatio-temporal fruit fly distribution was evaluated by thematic maps, using the inverse square distance interpolation. The semivariograms showed that most of the reviews were ‘pure nugget’ effect, indicating the absence of spatial data dependence. The spatio-temporal distribution maps allow us to assert that A. fraterculus shows invasive behavior in the vineyard, with its entry from the edges to the center, associated with the fruit ripening.
DOI: 10.6084/m9.figshare.9957146.v1
title: Spatial and temporal distribution of South American fruit fly in vineyards

description: ABSTRACT The South American fruit fly Anastrepha fraterculus (Wied., 1830) is one of the major insect pests of economic importance in vineyards of Southern Brazil. Understanding species behavior and knowing the moments when their population peaks occur can help producers and technicians to define management strategies. This work was carried out the spatial and temporal distribution of the A. fraterculus in two commercial vineyards of variety ‘Moscato Branco’ for two crop seasons. To evaluate the A. fraterculus distribution, we used the mass trapping system with handmade traps (transparent plastic bottles of polyethylene terephthalate - PET), baited with hydrolyzed protein CeraTrap™. The evaluations were performed every two weeks, counting the total number of adults found per trap in each vineyard. From the number of insects caught per trap, data analysis was performed using geostatistics, through semivariograms. The spatio-temporal fruit fly distribution was evaluated by thematic maps, using the inverse square distance interpolation. The semivariograms showed that most of the reviews were ‘pure nugget’ effect, indicating the absence of spatial data dependence. The spatio-temporal distribution maps allow us to assert that A. fraterculus shows invasive behavior in the vineyard, with its entry from the edges to the center, associated with the fruit ripening.