cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.12900125.v1
title: Additional file 5 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 5: Table S4. GO categorization for cellular component of mouse WD40 genes using DAVID.
DOI: 10.6084/m9.figshare.12900128
title: Additional file 6 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 6: Table S5. GO categorization for biological processes of human DCAF genes using DAVID.
DOI: 10.6084/m9.figshare.12900128.v1
title: Additional file 6 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 6: Table S5. GO categorization for biological processes of human DCAF genes using DAVID.
DOI: 10.6084/m9.figshare.12900125
title: Additional file 5 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 5: Table S4. GO categorization for cellular component of mouse WD40 genes using DAVID.
DOI: 10.6084/m9.figshare.12900119
title: Additional file 3 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 3: Table S2. List of DCAF subfamily genes in different species.
DOI: 10.6084/m9.figshare.12900131
title: Additional file 7 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 7: Table S6. IPA network analysis of DCAF subfamily genes.
DOI: 10.6084/m9.figshare.12900122
title: Additional file 4 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 4: Table S3. GO categorization for biological processes of mouse WD40 genes using Panther.
DOI: 10.6084/m9.figshare.12900116.v1
title: Additional file 2 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 2: Table S1. List of WD40-repeat encoding genes from mouse genome.
DOI: 10.6084/m9.figshare.12900122.v1
title: Additional file 4 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 4: Table S3. GO categorization for biological processes of mouse WD40 genes using Panther.
DOI: 10.6084/m9.figshare.12900134.v1
title: Additional file 8 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 8: Table S7. DCAF family genes specific primer sequences and PCR product size for mouse and human.
DOI: 10.6084/m9.figshare.12900134
title: Additional file 8 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 8: Table S7. DCAF family genes specific primer sequences and PCR product size for mouse and human.
DOI: 10.6084/m9.figshare.12900131.v1
title: Additional file 7 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 7: Table S6. IPA network analysis of DCAF subfamily genes.
DOI: 10.6084/m9.figshare.12900119.v1
title: Additional file 3 of Expression profiling of WD40 family genes including DDB1- and CUL4- associated factor (DCAF) genes in mice and human suggests important regulatory roles in testicular development and spermatogenesis

description: Additional file 3: Table S2. List of DCAF subfamily genes in different species.
DOI: 10.6084/m9.figshare.12900232
title: Additional file 1 of Identification of blood-feeding sources in Panstrongylus, Psammolestes, Rhodnius and Triatoma using amplicon-based next-generation sequencing

description: Additional file 1: Table S1. Complete dataset of the 42 triatomines used in this study. This dataset contains ID code, triatomine species, qPCR result, DTU information obtained through conventional PCR, geographical information (region and town), and correlating information for the insect (ecotope and sex).
DOI: 10.6084/m9.figshare.12900235
title: Additional file 2 of Identification of blood-feeding sources in Panstrongylus, Psammolestes, Rhodnius and Triatoma using amplicon-based next-generation sequencing

description: Additional file 2: Alignment S1. FASTA file with the 543 vertebrate species used as reference in this study.
DOI: 10.6084/m9.figshare.12900241.v1
title: Additional file 4 of Identification of blood-feeding sources in Panstrongylus, Psammolestes, Rhodnius and Triatoma using amplicon-based next-generation sequencing

description: Additional file 4: Figure S2. Relative abundance of reads corresponding to each triatomine species, regarding their division among the 15 arbitrary vertebrate groups.
DOI: 10.6084/m9.figshare.12900241
title: Additional file 4 of Identification of blood-feeding sources in Panstrongylus, Psammolestes, Rhodnius and Triatoma using amplicon-based next-generation sequencing

description: Additional file 4: Figure S2. Relative abundance of reads corresponding to each triatomine species, regarding their division among the 15 arbitrary vertebrate groups.
DOI: 10.6084/m9.figshare.12900235.v1
title: Additional file 2 of Identification of blood-feeding sources in Panstrongylus, Psammolestes, Rhodnius and Triatoma using amplicon-based next-generation sequencing

description: Additional file 2: Alignment S1. FASTA file with the 543 vertebrate species used as reference in this study.
DOI: 10.6084/m9.figshare.12900232.v1
title: Additional file 1 of Identification of blood-feeding sources in Panstrongylus, Psammolestes, Rhodnius and Triatoma using amplicon-based next-generation sequencing

description: Additional file 1: Table S1. Complete dataset of the 42 triatomines used in this study. This dataset contains ID code, triatomine species, qPCR result, DTU information obtained through conventional PCR, geographical information (region and town), and correlating information for the insect (ecotope and sex).
DOI: 10.18112/openneuro.ds002718.v1.0.3
title: Face processing EEG dataset for EEGLAB
DOI: 10.6084/m9.figshare.12900277
title: Additional file 10 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

description: Additional file 10 Table S4. Pan-genome table (excluding genes only found once in a genome) with strain RE22 for reference loci.
DOI: 10.6084/m9.figshare.12900277.v1
title: Additional file 10 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

description: Additional file 10 Table S4. Pan-genome table (excluding genes only found once in a genome) with strain RE22 for reference loci.
DOI: 10.6084/m9.figshare.12900280.v1
title: Additional file 1 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

description: Additional file 1 Table S1. Hemolysis and proteolysis reactions.
DOI: 10.6084/m9.figshare.12900292
title: Additional file 5 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

description: Additional file 5 Table S2. Phylogenetic logistic regression results.
DOI: 10.6084/m9.figshare.12900292.v1
title: Additional file 5 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

description: Additional file 5 Table S2. Phylogenetic logistic regression results.
DOI: 10.6084/m9.figshare.12900295
title: Additional file 6 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

description: Additional file 6 Table S3. Metabolism and nutrient acquisition genes significantly correlated with larvae survival/mortality.
DOI: 10.6084/m9.figshare.12900295.v1
title: Additional file 6 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

description: Additional file 6 Table S3. Metabolism and nutrient acquisition genes significantly correlated with larvae survival/mortality.
DOI: 10.6084/m9.figshare.12900280
title: Additional file 1 of Comparative genomic analysis of Vibrios yields insights into genes associated with virulence towards C. gigas larvae

description: Additional file 1 Table S1. Hemolysis and proteolysis reactions.
DOI: 10.6084/m9.figshare.12900308.v1
title: Additional file 1 of Insecticide resistance in indoor and outdoor-resting Anopheles gambiae in Northern Ghana

description: Additional file 1: Table S1. Number of indoor and outdoor test mosquitoes exposed and susceptibility rate to individual insecticides. Data on the number of mosquito populations exposed to insecticides and the susceptibility rate.
DOI: 10.6084/m9.figshare.12900308
title: Additional file 1 of Insecticide resistance in indoor and outdoor-resting Anopheles gambiae in Northern Ghana

description: Additional file 1: Table S1. Number of indoor and outdoor test mosquitoes exposed and susceptibility rate to individual insecticides. Data on the number of mosquito populations exposed to insecticides and the susceptibility rate.
DOI: 10.6084/m9.figshare.12900323
title: Additional file 2 of Pancreatic and intestinal endocrine cells in zebrafish share common transcriptomic signatures and regulatory programmes

description: Additional file 2: Table S1. Expression level of all genes in zebrafish enteroendocrine cells. The expression levels is given for all genes in CPM (counts per million) for the four EEC samples (column C to F) as well as the mean and the standard deviation obtained for each gene (columns G and H). The last column gives the mean expression levels in FPMK.
DOI: 10.6084/m9.figshare.12900323.v1
title: Additional file 2 of Pancreatic and intestinal endocrine cells in zebrafish share common transcriptomic signatures and regulatory programmes

description: Additional file 2: Table S1. Expression level of all genes in zebrafish enteroendocrine cells. The expression levels is given for all genes in CPM (counts per million) for the four EEC samples (column C to F) as well as the mean and the standard deviation obtained for each gene (columns G and H). The last column gives the mean expression levels in FPMK.
DOI: 10.6084/m9.figshare.12900335
title: Additional file 6 of Pancreatic and intestinal endocrine cells in zebrafish share common transcriptomic signatures and regulatory programmes

description: Additional file 6: Table S3. Lists of genes selectively expressed in EECs and in PECs with their gene ontology enrichment analyses. The genes specifically expressed in PECs were selected by their expression above 5 CPM in PECs and below 1 CPM in EECs (sheet1). Inversely EEC-specific genes were selected by their expression above 5 CPM in EECs and below 1 in PECs (sheet 2). The GO terms obtained for the PEC-specific genes and the EEC-specific genes are given in sheets 3 and 4 respectively.
DOI: 10.6084/m9.figshare.12900341.v1
title: Additional file 8 of Pancreatic and intestinal endocrine cells in zebrafish share common transcriptomic signatures and regulatory programmes

description: Additional file 8: Table S5. List of Pax6b-regulated genes and GO enrichment analysis. The excel sheets 1, 3 and 5 give respectively the lists of genes regulated by Pax6b in both PECs and EECs (sheet 1), in PECs only (sheet 3) and in EECs only (sheet 5) together with the expression level in normalized CPM in wild type and pax6b mutant EECs and PECs, the expression fold changes and the P-adjusted values. The excel sheets 2, 4 and 6 display respectively the enrichment of GO terms and pathways for the Pax6b-regulated genes in PECs and EECs (sheet 2), in PECs only (sheet 4) and in EECs only (sheet 6) together with the P-values for the Fischer exact test and the lists of genes associated to each GO term.
DOI: 10.6084/m9.figshare.12900344
title: Additional file 9 of Pancreatic and intestinal endocrine cells in zebrafish share common transcriptomic signatures and regulatory programmes

description: Additional file 9: Table S6. list of markers for each pancreatic endocrine cell subtypes. The list of markers for the pancreatic alpha-, beta-, delta- and epsilon- cell subtypes was obtained from previous published RNA-seq studies [24, 40]. This list was used to determine the proportion of cell subtype markers regulated by Pax6b as shown in the upper panel of Fig. 7.
DOI: 10.6084/m9.figshare.12900332.v1
title: Additional file 5 of Pancreatic and intestinal endocrine cells in zebrafish share common transcriptomic signatures and regulatory programmes

description: Additional file 5: Table S2. List of transcription factors expressed in both EECs and PECs, specific for EECs and specific for PECs. The expression level is given in FPKM. The TF expressed in both PECs and EECs were selected based on their expression level above the threshold of 1 FPKM in both cell types. The TF expressed specifically in PECs were obtained by selecting those expressed above 1 FPKM only in PECs and with an expression ratio of PEC/EEC above 5-fold. Inversely, EEC-specific TF were obtained by selecting those expressed above 1 FPKM only in EECs and with an expression ration EEC/PEC above 5-fold.
DOI: 10.6084/m9.figshare.12900335.v1
title: Additional file 6 of Pancreatic and intestinal endocrine cells in zebrafish share common transcriptomic signatures and regulatory programmes

description: Additional file 6: Table S3. Lists of genes selectively expressed in EECs and in PECs with their gene ontology enrichment analyses. The genes specifically expressed in PECs were selected by their expression above 5 CPM in PECs and below 1 CPM in EECs (sheet1). Inversely EEC-specific genes were selected by their expression above 5 CPM in EECs and below 1 in PECs (sheet 2). The GO terms obtained for the PEC-specific genes and the EEC-specific genes are given in sheets 3 and 4 respectively.
DOI: 10.6084/m9.figshare.12900338.v1
title: Additional file 7 of Pancreatic and intestinal endocrine cells in zebrafish share common transcriptomic signatures and regulatory programmes

description: Additional file 7: Table S4. Expression level of all genes EECs and PECs (wild type and pax6bsa0086). The expression level of all genes is given for wild-type and pax6b mutant EECs and PECs in normalized CPM. The expression levels in each sample are given in the excel sheet 1(“CPM samples”) and the means and standard deviations are given in excel sheet 2 (“mean and Sdt dev.”).
DOI: 10.6084/m9.figshare.12900332
title: Additional file 5 of Pancreatic and intestinal endocrine cells in zebrafish share common transcriptomic signatures and regulatory programmes

description: Additional file 5: Table S2. List of transcription factors expressed in both EECs and PECs, specific for EECs and specific for PECs. The expression level is given in FPKM. The TF expressed in both PECs and EECs were selected based on their expression level above the threshold of 1 FPKM in both cell types. The TF expressed specifically in PECs were obtained by selecting those expressed above 1 FPKM only in PECs and with an expression ratio of PEC/EEC above 5-fold. Inversely, EEC-specific TF were obtained by selecting those expressed above 1 FPKM only in EECs and with an expression ration EEC/PEC above 5-fold.
DOI: 10.6084/m9.figshare.12900338
title: Additional file 7 of Pancreatic and intestinal endocrine cells in zebrafish share common transcriptomic signatures and regulatory programmes

description: Additional file 7: Table S4. Expression level of all genes EECs and PECs (wild type and pax6bsa0086). The expression level of all genes is given for wild-type and pax6b mutant EECs and PECs in normalized CPM. The expression levels in each sample are given in the excel sheet 1(“CPM samples”) and the means and standard deviations are given in excel sheet 2 (“mean and Sdt dev.”).
DOI: 10.6084/m9.figshare.12900341
title: Additional file 8 of Pancreatic and intestinal endocrine cells in zebrafish share common transcriptomic signatures and regulatory programmes

description: Additional file 8: Table S5. List of Pax6b-regulated genes and GO enrichment analysis. The excel sheets 1, 3 and 5 give respectively the lists of genes regulated by Pax6b in both PECs and EECs (sheet 1), in PECs only (sheet 3) and in EECs only (sheet 5) together with the expression level in normalized CPM in wild type and pax6b mutant EECs and PECs, the expression fold changes and the P-adjusted values. The excel sheets 2, 4 and 6 display respectively the enrichment of GO terms and pathways for the Pax6b-regulated genes in PECs and EECs (sheet 2), in PECs only (sheet 4) and in EECs only (sheet 6) together with the P-values for the Fischer exact test and the lists of genes associated to each GO term.
DOI: 10.6084/m9.figshare.12900344.v1
title: Additional file 9 of Pancreatic and intestinal endocrine cells in zebrafish share common transcriptomic signatures and regulatory programmes

description: Additional file 9: Table S6. list of markers for each pancreatic endocrine cell subtypes. The list of markers for the pancreatic alpha-, beta-, delta- and epsilon- cell subtypes was obtained from previous published RNA-seq studies [24, 40]. This list was used to determine the proportion of cell subtype markers regulated by Pax6b as shown in the upper panel of Fig. 7.
DOI: 10.6084/m9.figshare.12900352.v1
title: Additional file 1 of The ceramide [NP]/[NS] ratio in the stratum corneum is a potential marker for skin properties and epidermal differentiation

description: Additional file 1: Supplemental Table 1.xls. Selected m/z values for ceramide species in the MS analysis of SC samples from healthy female facial skin.
DOI: 10.6084/m9.figshare.12900352
title: Additional file 1 of The ceramide [NP]/[NS] ratio in the stratum corneum is a potential marker for skin properties and epidermal differentiation

description: Additional file 1: Supplemental Table 1.xls. Selected m/z values for ceramide species in the MS analysis of SC samples from healthy female facial skin.
DOI: 10.6084/m9.figshare.12900371
title: Additional file 2 of A very early diagnosis of Alstrӧm syndrome by next generation sequencing

description: Additional file 2.
DOI: 10.6084/m9.figshare.12900368.v1
title: Additional file 1 of A very early diagnosis of Alstrӧm syndrome by next generation sequencing

description: Additional file 1.
DOI: 10.6084/m9.figshare.12900368
title: Additional file 1 of A very early diagnosis of Alstrӧm syndrome by next generation sequencing

description: Additional file 1.
DOI: 10.6084/m9.figshare.12900371.v1
title: Additional file 2 of A very early diagnosis of Alstrӧm syndrome by next generation sequencing

description: Additional file 2.
DOI: 10.6084/m9.figshare.12731548
title: Additional file 1 of Evidence synthesis in pulmonary arterial hypertension: a systematic review and critical appraisal

description: Additional file 1: Table S1. Eligibility criteria of the Systematic Literature Review. Table S2a-d. Search strategies (September 2018). Table S2e-h. Search strategies (April 2020 update). Table S3. Quality assessment of included evidence synthesis studies. Figure S1. Treatment algorithm. Figure S2a. PRISMA diagram showing study selection process (September 2018). Figure S2b. PRISMA diagram showing study selection process (April 2020 update). Figure S3a-d. Mean age, gender, disease duration and 6MWD in included RCTs.
DOI: 10.6084/m9.figshare.12731548.v1
title: Additional file 1 of Evidence synthesis in pulmonary arterial hypertension: a systematic review and critical appraisal

description: Additional file 1: Table S1. Eligibility criteria of the Systematic Literature Review. Table S2a-d. Search strategies (September 2018). Table S2e-h. Search strategies (April 2020 update). Table S3. Quality assessment of included evidence synthesis studies. Figure S1. Treatment algorithm. Figure S2a. PRISMA diagram showing study selection process (September 2018). Figure S2b. PRISMA diagram showing study selection process (April 2020 update). Figure S3a-d. Mean age, gender, disease duration and 6MWD in included RCTs.
DOI: 10.6084/m9.figshare.12900415
title: Additional file 7 of Influence of the amino-terminal sequence on the structure and function of HIV integrase

description: Additional file 7: File S7. Spreadsheet containing the underlying data for Figs. 2, 3, 4, Additional file 5: Figure S5, and Additional file 6: Figure S6.
DOI: 10.6084/m9.figshare.12900415.v1
title: Additional file 7 of Influence of the amino-terminal sequence on the structure and function of HIV integrase

description: Additional file 7: File S7. Spreadsheet containing the underlying data for Figs. 2, 3, 4, Additional file 5: Figure S5, and Additional file 6: Figure S6.
DOI: 10.6084/m9.figshare.12900436.v1
title: Additional file 1 of First European report of Francisella tularensis subsp. holarctica isolation from a domestic cat

description: Additional file 1. List of primers used for Sanger sequencing.
DOI: 10.6084/m9.figshare.12900436
title: Additional file 1 of First European report of Francisella tularensis subsp. holarctica isolation from a domestic cat

description: Additional file 1. List of primers used for Sanger sequencing.
DOI: 10.6084/m9.figshare.12900460
title: Additional file 2 of Mediterranean non indigenous species at the start of the 2020s: recent changes

description: Additional file 2.
DOI: 10.6084/m9.figshare.12900460.v1
title: Additional file 2 of Mediterranean non indigenous species at the start of the 2020s: recent changes

description: Additional file 2.
DOI: 10.6084/m9.figshare.12900457
title: Additional file 1 of Mediterranean non indigenous species at the start of the 2020s: recent changes

description: Additional file 1.
DOI: 10.6084/m9.figshare.12900457.v1
title: Additional file 1 of Mediterranean non indigenous species at the start of the 2020s: recent changes

description: Additional file 1.