cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.22002/4686y-ckd08
title: lysed E.coli minicells M259Q

description: lysed E.coli minicells M259Qtotal dose of tilt series too low
description: <strong>Tilt Series Date:</strong> 2013-03-22</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 19500x. </p>
<strong>Acquisition Software:</strong> FEIbatchtomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> succrose gradients for isolation, Lysis with Lysozyme</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-22-19/rawdata/</p>new19.st,  Tilt Series (Pixel Size 0.4171 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-22-19/rawdata/new19.st"
        > <i class="download icon"></i> Download </a></p>

        new19_full.rec,  Reconstruction (Pixel Size 0.8342 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-22-19/3dimage_26015/new19_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/26n4y-r6272
title: drp1

description: purified drp1
description: <strong>Tilt Series Date:</strong> 2013-09-07</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Drp1</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 41000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> David Chan</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-07-20/rawdata/</p>drp1_410006.mrc,  Tilt Series (Pixel Size 0.26 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-07-20/rawdata/drp1_410006.mrc"
        > <i class="download icon"></i> Download </a></p>

        drp1_410006_full.rec,  Reconstruction (Pixel Size 1.04 nm), 89.1 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-09-07-20/3dimage_30493/drp1_410006_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.15468/dl.f82nxm
title: Occurrence Download

description: A dataset containing 830 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Lactifluus corrugis"
 ]
}

 The dataset includes 830 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002119-250827131500795/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.22002/65f4a-ntz91
title: HUVECs 24h PI pNLBglI

description: Whole cells were grown on Au finder grids and infected with pNLGFPBglI. Sample frozen 24h post infection
description: <strong>Tilt Series Date:</strong> 2013-05-11</p>
<strong>Data Taken By:</strong> Cora Woodward</p>
<strong>Species / Specimen:</strong> HUVECs</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 150.0 eV/Å²,  defocus: -6.0 μm,  magnification: 19000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Whole cells were grown on Au finder grids and infected with pNLGFPBglI. Sample frozen 24h post infection</p>
<strong>Sample Preparation:</strong> manual blotting</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-05-11-1/rawdata/</p>C161-4ATC0001.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.3 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-05-11-1/rawdata/C161-4ATC0001.mrc"
        > <i class="download icon"></i> Download </a></p>

        C161-4ATC0001_full.rec,  Reconstruction (Pixel Size 2.4 nm), 516.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/cwl2013-05-11-1/3dimage_26741/C161-4ATC0001_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/cg6n7-1at74
title: R. sphaeroides Cryosections

description: R. sphaeroides Cryosections strain 593
description: <strong>Tilt Series Date:</strong> 2013-10-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 44000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Judith Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-92/rawdata/</p>rhodosectionsatlas20039.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-92/rawdata/rhodosectionsatlas20039.mrc"
        > <i class="download icon"></i> Download </a></p>

        rhodosectionsatlas20039_full.rec,  Reconstruction (Pixel Size 0.64 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-92/3dimage_33219/rhodosectionsatlas20039_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/xpm2m-7w972
title: Clostridium thermocellum

description: cellulosome
description: <strong>Tilt Series Date:</strong> 2013-07-29</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Clostridium thermocellum</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 18000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Eric Matson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> growth on cellulobiose, anaerobic</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-07-29-4/3dimage_29377/</p>cthermo0004_full.rec,  Reconstruction (Pixel Size 2.4 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-07-29-4/3dimage_29377/cthermo0004_full.rec"
        > <i class="download icon"></i> Download </a></p>

        cthermo0004.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-07-29-4/rawdata/cthermo0004.mrc"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/4kfk1-2ry89
title: Agrobacterium tumefaciens

description: wild type
description: <strong>Tilt Series Date:</strong> 2014-03-06</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Agrobacterium tumefaciens</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -8.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> Cells were grown in AB medium</p>
<strong>Sample Preparation:</strong> Vitrobot</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-03-06-3/rawdata/</p>wt20001.mrc,  Tilt Series (Pixel Size 0.4 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-03-06-3/rawdata/wt20001.mrc"
        > <i class="download icon"></i> Download </a></p>

        wt20001_part121_60.rec,  Reconstruction (Pixel Size 1.6 nm), 356.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2014-03-06-3/3dimage_39758/wt20001_part121_60.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/713gv-esk88
title: lysed E.coli minicells M259Q

description: lysed E.coli minicells M259Qtotal dose of tilt series too low
description: <strong>Tilt Series Date:</strong> 2013-03-22</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> RP 437</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -8.0 μm,  magnification: 19500x. </p>
<strong>Acquisition Software:</strong> FEIbatchtomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> John S. Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> succrose gradients for isolation, Lysis with Lysozyme</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-22-40/rawdata/</p>new40.st,  Tilt Series (Pixel Size 0.4171 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-22-40/rawdata/new40.st"
        > <i class="download icon"></i> Download </a></p>

        new40_part121_15.rec,  Reconstruction (Pixel Size 0.8342 nm), 2.8 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-03-22-40/3dimage_26106/new40_part121_15.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/h6s2t-pgb39
title: dQ167_21h_induced

description: This is the strain in which dQ has been deactivated and an inducible plasmid is present for dQ
description: <strong>Tilt Series Date:</strong> 2014-12-30</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Magnetospirillum magneticum </p>
<strong>Strain:</strong> deltaQ 167</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1.0°, constant angular increment, dosage: 100.0 eV/Å²,  defocus: -15.0 μm,  magnification: 18000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Arash Komeili</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-30-16/rawdata/</p>dQ167_21hinduced_atlas130002.mrc,  Tilt Series (Pixel Size 0.6 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-30-16/rawdata/dQ167_21hinduced_atlas130002.mrc"
        > <i class="download icon"></i> Download </a></p>

        dQ167_21hinduced_atlas130002_part121_1.rec,  Reconstruction (Pixel Size 2.4 nm), 623.6 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2014-12-30-16/3dimage_50016/dQ167_21hinduced_atlas130002_part121_1.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/w6exx-ryt45
title: Bacillus subtilis ponA mutant

description: JLG639    pbpF::Em pbpG::Km ponA::Sp
description: <strong>Tilt Series Date:</strong> 2013-08-03</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus subtilis </p>
<strong>Strain:</strong> MJ007, ponA null</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-50.0°, 50.0°), step: 1.0°, constant angular increment, dosage: 180.0 eV/Å²,  defocus: -10.0 μm,  magnification: 19500x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Polara, UCSFtomo</p>
<strong>Collaborators and Roles:</strong> Javi and Kit Pogliano</p>
<strong>Purification / Growth Conditions / Treatment:</strong> sporulating bacteria</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-03-27/rawdata/</p>bs6390027.mrc,  Tilt Series (Pixel Size 0.6 nm), 2.9 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-03-27/rawdata/bs6390027.mrc"
        > <i class="download icon"></i> Download </a></p>

        bs6390027_full.rec,  Reconstruction (Pixel Size 2.4 nm), 712.7 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-08-03-27/3dimage_29556/bs6390027_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/n9dps-0fq05
title: 1ug chloramphenicol

description: Raw data files of 1ug chloramphenicol
description: <strong>Tilt Series Date:</strong> 2013-12-11</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  psa2013-12-11-25_slicer4447.jpg: Granule .  Vesicle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2013-12-11-25/rawdata/</p>atlas20014.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2013-12-11-25/rawdata/atlas20014.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas20014_full.rec,  Reconstruction (Pixel Size 1.92 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2013-12-11-25/3dimage_35986/atlas20014_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/cd8q1-3h948
title: 1ug chloramphenicol

description: Raw data files of 1ug chloramphenicol
description: <strong>Tilt Series Date:</strong> 2013-12-11</p>
<strong>Data Taken By:</strong> Poorna Subramanian</p>
<strong>Species / Specimen:</strong> Caulobacter crescentus</p>
<strong>Strain:</strong> NA1000</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 22500x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
  psa2013-12-11-13_slicer4128.jpg: Granule psa2013-12-11-13_slicer4133.jpg: S layer psa2013-12-11-13_slicer4138.jpg: Granule psa2013-12-11-13_slicer4141.jpg: Extracellular vesicle
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2013-12-11-13/rawdata/</p>atlas20002.mrc,  Tilt Series (Pixel Size 0.48 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2013-12-11-13/rawdata/atlas20002.mrc"
        > <i class="download icon"></i> Download </a></p>

        atlas20002_part121_2.rec,  Reconstruction (Pixel Size 1.92 nm), 445.4 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/psa2013-12-11-13/3dimage_35962/atlas20002_part121_2.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/jg0bn-t5t27
title: Bacillus cereus

description: Bacillus cereus ATCC 14579
description: <strong>Tilt Series Date:</strong> 2013-05-30</p>
<strong>Data Taken By:</strong> Elitza Tocheva</p>
<strong>Species / Specimen:</strong> Bacillus cereus</p>
<strong>Strain:</strong> Bacillus cereus</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 200.0 eV/Å²,  defocus: -10.0 μm,  magnification: 19000x. </p>
<strong>Acquisition Software:</strong> UCSF tomo</p>
<strong>Upload Method:</strong> uploadraptor</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Purification / Growth Conditions / Treatment:</strong> pure spores</p>
<strong>Sample Preparation:</strong> quantifoil grid R2/2, 20nm gold, 100% humidity</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-30-2/rawdata/</p>Bcereus_purespores0002.mrc,  Tilt Series (Pixel Size 0.56 nm), 3.1 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-30-2/rawdata/Bcereus_purespores0002.mrc"
        > <i class="download icon"></i> Download </a></p>

        2_full.rec,  Reconstruction (Pixel Size 2.24 nm), 720.0 MB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/etl2013-05-30-2/3dimage_32216/2_full.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/tb8me-c1114
title: CO33

description: pRR53(TsrΔ263-266::ApR) (tar-CheB)∆4346 (tsr)∆5547 (aer)∆1 ygjG::Gm (trg)∆4543 mreB-A125V ∆min::kan thr(Am)-1 leuB6 his-4 metF(Am)159 rpsL136 [thi-1 ara- 14 lacY1 mtl-1 xyl-5 tonA31 tsx-78]skinny-mini,  stable HAMP
description: <strong>Tilt Series Date:</strong> 2014-10-27</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 1°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Batchruntomo</p>
<strong>Collaborators and Roles:</strong> Sandy Parkinson</p>
<strong>Purification / Growth Conditions / Treatment:</strong> induce with 100 μM IPTG</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-27-30/rawdata/</p>CO33minicell0030.mrc,  Tilt Series (Pixel Size 0.32 nm), 3.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-27-30/rawdata/CO33minicell0030.mrc"
        > <i class="download icon"></i> Download </a></p>

        CO33minicell0030.rec,  Reconstruction (Pixel Size 1.28 nm), 1.4 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-10-27-30/3dimage_47728/CO33minicell0030.rec"
        > <i class="download icon"></i> Download </a></p>
DOI: 10.22002/2tdaq-3ns33
title: LD 4Q

description: low density TarCF-4Q on vesicles
description: <strong>Tilt Series Date:</strong> 2014-02-20</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Escherichia coli in vitro</p>
<strong>Strain:</strong> </p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 34000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Lynmarie Thompson</p>
description: Files available via S3 at https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-20-5/rawdata/</p>LD4Qmanualblot0005.mrc,  Tilt Series (Pixel Size 0.35 nm), 1.7 GB  
        
<a role="button" class="ui compact mini button" href="https://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2014-02-20-5/rawdata/LD4Qmanualblot0005.mrc"
        > <i class="download icon"></i> Download </a></p>

        LD4Qmanualblot0005_full.rec,  Reconstruction (Pixel Size 1.4 nm), 445.4 MB  
        
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DOI: 10.22002/daa3f-eyw68
title: R. sphaeroides Cryosections

description: R. sphaeroides Cryosections strain 593
description: <strong>Tilt Series Date:</strong> 2013-10-23</p>
<strong>Data Taken By:</strong> Ariane Briegel</p>
<strong>Species / Specimen:</strong> Rhodobacter sphaeroides</p>
<strong>Strain:</strong> ATCC 17023</p>
<strong>Tilt Series Settings:</strong>  Single Axis, tilt range: (-60.0°, 60.0°), step: 2°, constant angular increment, dosage: 160.0 eV/Å²,  defocus: -10.0 μm,  magnification: 44000x. </p>
<strong>Microscope:</strong> Caltech Polara</p>
<strong>Acquisition Software:</strong> UCSFTomo</p>
<strong>Upload Method:</strong> pipeline</p>
<strong>Processing Software Used:</strong> Raptor</p>
<strong>Collaborators and Roles:</strong> Judith Armitage</p>
description: Files available via S3 at ps://sdsc.osn.xsede.org/ini210004tommorrell/tomography_archive/aba2013-10-23-64/rawdata/</p>rhodosectionsatlas20011.mrc,  Tilt Series (Pixel Size 0.32 nm), 1.7 GB  
        
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        rhodosectionsatlas20011_full.rec,  Reconstruction (Pixel Size 0.64 nm), 2.9 GB  
        
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DOI: 10.6084/m9.figshare.29994850
title: <b>DataSets used in "Multi-scale hybrid correction of noisy long reads"</b>

description: <br><b>The source code of DADEC is available at </b>https://github.com/ZYMavis/DADEC