cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.6576313
title: Thermal site energy fluctuations in photosystem I: New insights from MD/QM/MM calculations

description: We calculated the site energies of all 96 chlorophylls in a fully atomistic, trimeric and membrane-embedded model of cyanobacterial photosystem I (PDB Code: 1JB0). The resulting data set accounts for 



	

	
thermal fluctuations within the entire photosystem by sampling 40 conformational snapshots from molecular dynamics trajectories.
	
	

	
the electrostatic effects of the natural environment on the chlorophyll excitation by means of QM/MM calculations.
	
	

	
the multireference nature of chlorophyll excitations by using the high-level DFT/MRCI method in the QM region.
	



Analysis of the data set reveals thermal fluctuations which prevent the formation of a single prominent energy funnel in the antenna complex. We conclude that energy transfer pathways may form only transiently at physiological temperatures, as thermal fluctuations overcome energy barriers.


v1.1.0


Added more snapshots for reaction center chlorophylls, results from statistical analysis and excitonic couplings in the point dipole approximation.


v1.0.0


Site energies, site energy shifts and absorption spectra of each chlorophyll in each snapshot, computed with and without environmental point charges. Structures and newly derived or modified force field parameters are also provided.


For a detailed overview of each file, please refer to the README.
description: This work is funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) through the cluster of excellence e-conversion under Germany's Excellence Strategy: EXC 2089/1-390776260
DOI: 10.15468/dl.nwfvkh
title: Occurrence Download

description: A dataset containing 1981 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Palaemon varians Leach, 1813",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 1981 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078179-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7wqqgh
title: Occurrence Download

description: A dataset containing 129 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Chorismus antarcticus (Pfeffer, 1887)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 129 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078180-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9q5rh7
title: Occurrence Download

description: A dataset containing 4444 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((122.31732 -54.40782,223.27445 -54.40782,223.27445 4.63248,122.31732 4.63248,122.31732 -54.40782))",
 "TaxonKey is Nautilida"
 ]
}

 The dataset includes 4444 records from 41 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078181-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.y2newd
title: Occurrence Download

description: A dataset containing 32203 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Chionoecetes opilio (Fabricius, 1788)",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 32203 records from 34 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078182-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13362256
title: Dataset 2:Coarse-grained simulations of adeno-associated virus and its receptor reveal influences on membrane lipid organisation and curvature.
DOI: 10.5281/zenodo.13362257
title: Dataset 2:Coarse-grained simulations of adeno-associated virus and its receptor reveal influences on membrane lipid organisation and curvature.
DOI: 10.15468/dl.mh2w4d
title: Occurrence Download

description: A dataset containing 260 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Human Observation, Material sample, Occurrence evidence)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Thaumatotibia leucotreta (Meyrick, 1913)"
 ]
}

 The dataset includes 260 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078183-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mctfay
title: Occurrence Download

description: A dataset containing 6597 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-106.58361 28.89033,-102.23596 28.89033,-102.23596 31.92738,-106.58361 31.92738,-106.58361 28.89033))",
 "TaxonKey is Cypriniformes"
 ]
}

 The dataset includes 6597 records from 25 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078184-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hs4vcu
title: Occurrence Download

description: A dataset containing 8452 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Hyas coarctatus Leach, 1815",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 8452 records from 64 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078186-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26809274
title: Palaeoproterozoic (late 'Laxfordian') reworking of juvenile Neoarchean Lewisian orthogneisses, Iona, Inner Hebrides, Scotland

description: Supplementary tables S1 S2 S3
DOI: 10.6084/m9.figshare.26809274.v1
title: Palaeoproterozoic (late 'Laxfordian') reworking of juvenile Neoarchean Lewisian orthogneisses, Iona, Inner Hebrides, Scotland

description: Supplementary tables S1 S2 S3
DOI: 10.15468/dl.9zg4kj
title: Occurrence Download

description: A dataset containing 37 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen)"
 ]
 }
 }
 ]
 },
 "SpeciesKey is Dissodactylus primitivus Bouvier, 1917",
 "Year is greater than or equal to 2004",
 "Year is less than or equal to 2023"
 ]
}

 The dataset includes 37 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078187-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.rk5rh4
title: Occurrence Download

description: A dataset containing 4129 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((-113.93877 -62.86196,-21.1837 -62.86196,-21.1837 35.90056,-113.93877 35.90056,-113.93877 -62.86196))",
 "TaxonKey is Amazona vinacea (Kuhl, 1820)"
 ]
}

 The dataset includes 4129 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078189-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.13362406
title: Core log descriptions and sediment grain size data for Hurricane Ian sediment cores collected in Lee County, Florida, USA

description: These data represent qualitative and quantitative measurements of sediment cores collected from various environments following the landfall of Hurricane Ian. These sediment cores were collected using pound coring techniques up to 2m into the subsurface to characterize the sedimentological signature of storm deposits resulting from Hurricane Ian. More details regarding these measurements and interpretations of storm deposits can be found in the folllowing manuscript:

McCormick, W.M., Briggs, T.R., Hauptman, L.H., Wang, P., Morphologic and sedimentological signatures resulting from Hurricane Ian, southwest Florida, USA: Insight into intra-storm bidirectional sediment transport processes (In Review).
DOI: 10.5281/zenodo.13362407
title: Core log descriptions and sediment grain size data for Hurricane Ian sediment cores collected in Lee County, Florida, USA

description: These data represent qualitative and quantitative measurements of sediment cores collected from various environments following the landfall of Hurricane Ian. These sediment cores were collected using pound coring techniques up to 2m into the subsurface to characterize the sedimentological signature of storm deposits resulting from Hurricane Ian. More details regarding these measurements and interpretations of storm deposits can be found in the folllowing manuscript:

McCormick, W.M., Briggs, T.R., Hauptman, L.H., Wang, P., Morphologic and sedimentological signatures resulting from Hurricane Ian, southwest Florida, USA: Insight into intra-storm bidirectional sediment transport processes (In Review).
DOI: 10.5281/zenodo.12788420
title: AnnoPage Dataset

description: AnnoPage Dataset contains pages of mostly historical documents and annotations of non-textual objects, such as images, diagrams, symbols, initials, etc. The dataset contains data mostly from czech written documents downloaded from Digital Library, but it also contains annotations for pages from other already published datasets which are listed below together with links. The provided ZIP archive includes a text file referencing the pages from these datasets. The complete list of the annotated object categories is also listed below. The dataset contains a split into training and testing subsets, the creation of the validation subset is up to the users.

 

The ZIP archive of the provided dataset is organized as follows:





images/ - directory with published 5690 images divided into train and test subdirectories

labels/ - directory with annotations in 7550 text files divided into train and test subdirectories

README.md - README file with the same information as displayed on this website

classes.txt - text file with object categories

dataset.yaml - YAML file with dataset definition

images.txt - text file with references to the 1860 annotated images from other datasets



This dataset was crated within Orbis Pictus – book revival for cultural and creative sectors project.

Extra datasets



illuhisdoc

PRImA Layout Analysis Dataset

PRImA RDCL2019

PRImA Europeana Newspapers

READ-ICDAR2019-cBAD-dataset

TexBiG


Object categories



Chemical formula and equation

Symbol, logo, coat of arms

Exlibris

Photograph

Geometric drawing

Graph

Initial

Caricature and comics

Map

Mathematical expression and equation

Musical notation

Image

Other book decor

Other technical drawing

Decorative inscription

Floor plan

Barcode and QR code

Stamp

Advertisement

Handwritten note

Diagram

Signet

Table

Vignette

Frieze
DOI: 10.15468/dl.u9tugw
title: Occurrence Download

description: A dataset containing 276697 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Nyctalus leisleri (Kuhl, 1817)",
 "HasCoordinate is true",
 "Year is greater than or equal to 2011",
 "Year is less than or equal to 2024"
 ]
}

 The dataset includes 276697 records from 2954 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0078177-240626123714530/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10367810
title: Stoneware Medallion BAT539B, BAT21230 & BAT2609

description: Collected by WA Museum Diving team. Inshore reef - Houtman Abrolhos- Wallabi Group. 

Recorded by Patrick Morrison 2020.

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367809
title: Stoneware Medallion BAT539B, BAT21230 & BAT2609

description: Collected by WA Museum Diving team. Inshore reef - Houtman Abrolhos- Wallabi Group. 

Recorded by Patrick Morrison 2020.

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367812
title: Oak Barrel

description: An oak barrel.

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367811
title: Oak Barrel

description: An oak barrel.

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367813
title: Cave in WW1 base, Maununneva, Helsinki, Finland

description: 120 m² cave in First World War base XVIII:10 in [Krepost Sveaborg](https://en.wikipedia.org/wiki/Krepost_Sveaborg) land front defense line in Kasemattikallio park, Maununneva, Helsinki, Finland. The base was built in 1915 - 1918. The cave connects the trenches betwee western and eastern parts of the base.

The whole base contains:

* 150 meters of thrench
* 2 observation positions
* 2 search light positions
* At least 5 shelter rooms
* 120 m² cave

More info:

* [Location in Google Maps](https://goo.gl/maps/jgmBfQrNAeF5RhnB6)
* [Wikipedia: Krepost Sveaborg](https://en.wikipedia.org/wiki/Krepost_Sveaborg)
* [John Lagerstedt , Markku Saari: Krepost Sveaborg](http://www.novision.fi/viapori/eavaus.htm)
* [Finnish Heritage Agency site info](https://www.kyppi.fi/to.aspx?id=112.1000013737) (only in finnish)

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367814
title: Cave in WW1 base, Maununneva, Helsinki, Finland

description: 120 m² cave in First World War base XVIII:10 in [Krepost Sveaborg](https://en.wikipedia.org/wiki/Krepost_Sveaborg) land front defense line in Kasemattikallio park, Maununneva, Helsinki, Finland. The base was built in 1915 - 1918. The cave connects the trenches betwee western and eastern parts of the base.

The whole base contains:

* 150 meters of thrench
* 2 observation positions
* 2 search light positions
* At least 5 shelter rooms
* 120 m² cave

More info:

* [Location in Google Maps](https://goo.gl/maps/jgmBfQrNAeF5RhnB6)
* [Wikipedia: Krepost Sveaborg](https://en.wikipedia.org/wiki/Krepost_Sveaborg)
* [John Lagerstedt , Markku Saari: Krepost Sveaborg](http://www.novision.fi/viapori/eavaus.htm)
* [Finnish Heritage Agency site info](https://www.kyppi.fi/to.aspx?id=112.1000013737) (only in finnish)

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367815
title: Dome of Soltaniyeh

description: A photogrammetric model of the Dome of Soltaniyeh in Soltaniyeh city, Iran. didn't really have that much time to take a lot of photos, but it turned out pretty good considering.

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367816
title: Dome of Soltaniyeh

description: A photogrammetric model of the Dome of Soltaniyeh in Soltaniyeh city, Iran. didn't really have that much time to take a lot of photos, but it turned out pretty good considering.

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367819
title: Basalt organs (photogrammetry)

description: # Photogrammetry of Basalt Organs

This 3D model was realised in Reunion Island in "l'Entre-Deux" 



 Camera:  Sony DSC HX-100V

 Type:  Photogrammetry

 Focal:  24 x 36

(Source of Wikipedia): Organs (by analogy with the instrument) or basalt columns are a geological formation made up of regular columns. It results from the solidification and thermal contraction of a basaltic flow shortly after its emission. The lower part, which cools or dries up more slowly, fractures from surface to depth in the form of sub-vertical prisms with a hexagonal section of decimetric order. These columns are surmounted by a zone of small less regular prisms (or "false prism") which can be combined in sheaves.


Basaltic organs in the arm of the L'Entre-Deux river.
By extension one often qualifies as basaltic organs volcanic formations whose composition is not basaltic, for example in France the organs of Bort and of the Sanadoire rock (made up of phonolite).

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367820
title: Basalt organs (photogrammetry)

description: # Photogrammetry of Basalt Organs

This 3D model was realised in Reunion Island in "l'Entre-Deux" 



 Camera:  Sony DSC HX-100V

 Type:  Photogrammetry

 Focal:  24 x 36

(Source of Wikipedia): Organs (by analogy with the instrument) or basalt columns are a geological formation made up of regular columns. It results from the solidification and thermal contraction of a basaltic flow shortly after its emission. The lower part, which cools or dries up more slowly, fractures from surface to depth in the form of sub-vertical prisms with a hexagonal section of decimetric order. These columns are surmounted by a zone of small less regular prisms (or "false prism") which can be combined in sheaves.


Basaltic organs in the arm of the L'Entre-Deux river.
By extension one often qualifies as basaltic organs volcanic formations whose composition is not basaltic, for example in France the organs of Bort and of the Sanadoire rock (made up of phonolite).

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367821
title: Old Chinese bronze stamp

description: Old Chinese bronze wax stamp representing a Tortle

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367822
title: Old Chinese bronze stamp

description: Old Chinese bronze wax stamp representing a Tortle

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367823
title: Mainz um 800, G7

description: Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367824
title: Mainz um 800, G7

description: Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367825
title: Cunieform Tablet (BM3)

description: This is from the Banks Bequest and is current housed at the Rollins Musuem of Art.

Model made by Ellie Minette.

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367826
title: Cunieform Tablet (BM3)

description: This is from the Banks Bequest and is current housed at the Rollins Musuem of Art.

Model made by Ellie Minette.

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367830
title: Jarro - Fajalauza-HD (13)

description: Jarro (CE02039) producido en los talleres de Fajalauza (Granada, España). Ha sido modelado a torno y cocido en una atmósfera oxidante. Tiene una forma cerrada y está parcialmente fragmentado. Presenta un cuello vertical y un hombro curvilíneo cóncavo. El cuerpo es globular y la base plana. Del cuerpo arranca un asa de puente con sección elíptica. Ha sido decorado en azul sobre fondo blanco con motivos florales desarrollados en el cuerpo.

* Cronología: 1º mitad del siglo XVI.
* Depósito: Museo Arqueológico y Etnológico de Granada. 
* Yacimiento: Desconocido.

[FAJALAUZA-Hd](https://acortar.link/bNsUsm)

Colaboran: [PRINMA](http://blogs.ugr.es/prinma/), [UGR](http://www.ugr.es), [Fundación Fajalauza](https://acortar.link/shJ8ps) , [Museo Arqueológico y Etnológico de Granada](https://acortar.link/DF0cOC), [Patronato de la Alhambra y Generalife](https://acortar.link/FcstHW)

Fotografías y modelo: [Francisco Lara Piñera](https://acortar.link/Bam3Op)

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367829
title: Jarro - Fajalauza-HD (13)

description: Jarro (CE02039) producido en los talleres de Fajalauza (Granada, España). Ha sido modelado a torno y cocido en una atmósfera oxidante. Tiene una forma cerrada y está parcialmente fragmentado. Presenta un cuello vertical y un hombro curvilíneo cóncavo. El cuerpo es globular y la base plana. Del cuerpo arranca un asa de puente con sección elíptica. Ha sido decorado en azul sobre fondo blanco con motivos florales desarrollados en el cuerpo.

* Cronología: 1º mitad del siglo XVI.
* Depósito: Museo Arqueológico y Etnológico de Granada. 
* Yacimiento: Desconocido.

[FAJALAUZA-Hd](https://acortar.link/bNsUsm)

Colaboran: [PRINMA](http://blogs.ugr.es/prinma/), [UGR](http://www.ugr.es), [Fundación Fajalauza](https://acortar.link/shJ8ps) , [Museo Arqueológico y Etnológico de Granada](https://acortar.link/DF0cOC), [Patronato de la Alhambra y Generalife](https://acortar.link/FcstHW)

Fotografías y modelo: [Francisco Lara Piñera](https://acortar.link/Bam3Op)

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367831
title: Cliffard's Tower in York

description: York Castle is a fortified complex in the city of York, England. It has comprised a sequence of castles, prisons, law courts and other buildings, which were built over the last nine centuries on the south side of the River Foss. The now-ruined keep of the medieval Norman castle is commonly referred to as Clifford's Tower. Built originally on the orders of William I to dominate the former Viking city of Jórvík, the castle suffered a tumultuous early history before developing into a major fortification with extensive water defences. After a major explosion in 1684 rendered the remaining military defences uninhabitable, York Castle continued to be used as a jail and prison until 1929.

Processed with Agisoft Metashape in August 2020 using frames from a Youtube video - https://www.youtube.com/watch?v=6oTA1uN2-Jo

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367832
title: Cliffard's Tower in York

description: York Castle is a fortified complex in the city of York, England. It has comprised a sequence of castles, prisons, law courts and other buildings, which were built over the last nine centuries on the south side of the River Foss. The now-ruined keep of the medieval Norman castle is commonly referred to as Clifford's Tower. Built originally on the orders of William I to dominate the former Viking city of Jórvík, the castle suffered a tumultuous early history before developing into a major fortification with extensive water defences. After a major explosion in 1684 rendered the remaining military defences uninhabitable, York Castle continued to be used as a jail and prison until 1929.

Processed with Agisoft Metashape in August 2020 using frames from a Youtube video - https://www.youtube.com/watch?v=6oTA1uN2-Jo

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367833
title: Meriam Ki Amuk

description: Meriam ki amuk adalah cagar budaya yang berada di kawasan banten lama

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367834
title: Meriam Ki Amuk

description: Meriam ki amuk adalah cagar budaya yang berada di kawasan banten lama

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367835
title: Treasure Chest

description: Treasure Chest made with blender 2.79.

Source: Objaverse 1.0 / Sketchfab
DOI: 10.5281/zenodo.10367836
title: Treasure Chest

description: Treasure Chest made with blender 2.79.

Source: Objaverse 1.0 / Sketchfab