cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7700123
title: THzSecurityImageDataset

description: This is a THz Security Image Dataset. Possible researches on this dataset may include the development of THz quality standards, the selection of the best display mode, the enhancement of images, the modeling of image noise, and the detection of prohibited goods (include groundtruth in "data" file).If you have any questions, you can send a request to humenghan89@163.comPlease cite the following paper if you wish to use our dataset: Menghan Hu, Guangtao Zhai, Rong Xie, Xiongkuo Min, Qingli Li, Xiaokang Yang, Wenjun Zhang, "A Wavelet-Predominant Algorithm can Evaluate Quality of THz Security Image and Identify its Usability," IEEE Transactions on Broadcasting, 2019, accepted.
DOI: 10.7284/117237
title: Radiometer data collected during research cruise AT26-29 using a Eppley PSP instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7700120
title: Morfometria de Neritina zebra

description: Morphometry of Neritina zebra. Sample collected at Mangabeira beach in Ponta de Pedras, Pará.
DOI: 10.6084/m9.figshare.7700102
title: AIBECS circulations

description: This file contains the Ocean Circulation Inverse Model (OCIM 1.1), converted from MATLAB's MAT format to Julia's JLD2 format.<br>The code used to create the JLD2 file uploaded here is located in the GitHub code repository of the same name as this data repository (https://github.com/briochemc/AIBECS_circulations).<br>It uses the DataDeps.jl package to download and locally store the original MATLAB OCIM files, the MAT.jl package to load the MAT file in Julia, and the JLD2 package to save the file locally as a JLD2 file. The JLD2 files were then uploaded on FigShare manually.<br>Note that OCIM 1.1 was not created by me (BP) — I only downloaded and converted the MAT file into a JLD2 file.<br>Please see DeVries (2014) Table 1 for details and reference this paper as well as DeVries and Primeau (2011) when using the OCIM 1.1. <br><br>I believe that the grant information for the creation of OCIM can be found in those references.<br>The license I attached is the MIT but I actually do not know if this is the correct one I should attach here as I was not involved in the original MATLAB files of the OCIM 1.1.<br>In the future, this repository will likely disappear and AIBECS will directly download the MAT files from a data repository owned by Tim DeVries and convert them on the fly.<br>
DOI: 10.7284/117240
title: Multiplexed data collected during research cruise AT26-30 using a WHOI Calliope instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7700072
title: Code and data for "Entropic uncertainty relations for information scrambling"

description: Numerical simulation code and data for the paper: Reconciling two notions of quantum operator disagreement: Entropic uncertainty relations and information scrambling, united through quasiprobabilities [1806.04147]<br> The Python file simulationTools.py contains a collection of tools for simulating and visualizing the behavior of spin chains. This file is used by the other Python scripts and Jupyter notebooks.<br> examples.ipynb is a convenient Jupyter notebook interface for using simulationTools.py. The Jupyter notebook starts with a guided example demonstrating the use of simulationTools.py for simulating the evolution of a spin chain and visualizing the various quantities of interest. The notebook also contains multiple examples with pre-specified parameter choices that produce interesting behavior. It should be cautioned that examples involving fine-grained projectors can take several hours to run, depending on the type of computer and number of workers.<br> create_weak_data.py and create_strong_data.py generate the datasets used in the paper. These scripts simulate the behavior of a Power-law Quantum Ising Model in the weak-coupling regime with coarse-grained projectors and the strong-coupling regime with fine-grained projectors, respectively. The create_strong_data.py script will take up to a week to run unless shared across multiple machines.<br> The zip files weak_data.zip and strong_data.zip contain the datasets produced by create_weak_data.py and create_strong_data.py, respectively.<br> The Jupyter notebooks visualize-weak.ipynb and visualize-strong.ipynb visualize the datasets in weak_data/ and strong_data/, respectively. The plots generated in these notebooks are the same as the ones used in the paper.
DOI: 10.6084/m9.figshare.7700120.v2
title: Morfometria de Neritina zebra

description: Morphometry of Neritina zebra. Sample collected at Mangabeira beach in Ponta de Pedras, Pará.
DOI: 10.6084/m9.figshare.7700123.v1
title: THz Security Image Dataset

description: This is a THz Security Image Dataset. Possible researches on this dataset may include the development of THz quality standards, the selection of the best display mode, the enhancement of images, the modeling of image noise, and the detection of prohibited goods (include groundtruth in "data" file).If you have any questions, you can send a request to humenghan@sjtu.edu.cnPlease cite the following paper if you wish to use our dataset: Menghan Hu, Guangtao Zhai, Rong Xie, Xiongkuo Min, Qingli Li, Xiaokang Yang, Wenjun Zhang, "A Wavelet-Predominant Algorithm can Evaluate Quality of THz Security Image and Identify its Usability," IEEE Transactions on Broadcasting, 2019, accepted.
DOI: 10.6084/m9.figshare.7700066
title: 35-Year Climate Data in Guangzhou China (1980-2014)

description: This file contains the 35-year climate dataset from 1980 through 2014.
DOI: 10.6084/m9.figshare.7700102.v1
title: OCIM1 in JLD2 format

description: OCIM1 MATLAB file converted to JLD2 format for use in Julia.
DOI: 10.7284/117242
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise AT26-30 using a Hawaii UHDAS instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7700123.v2
title: THz Security Image Dataset

description: This is a THz Security Image Dataset. Possible researches on this dataset may include the development of THz quality standards, the selection of the best display mode, the enhancement of images, the modeling of image noise, and the detection of prohibited goods (include groundtruth in "data" file).If you have any questions, you can send a request to humenghan@sjtu.edu.cnPlease cite the following paper if you wish to use our dataset: Menghan Hu, Guangtao Zhai, Rong Xie, Xiongkuo Min, Qingli Li, Xiaokang Yang, Wenjun Zhang, "A Wavelet-Predominant Algorithm can Evaluate Quality of THz Security Image and Identify its Usability," IEEE Transactions on Broadcasting, 2019, accepted.
DOI: 10.7284/117243
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise AT26-30 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7700102.v2
title: OCIM1 in JLD2 format

description: OCIM1 MATLAB file converted to JLD2 format for use in Julia.
DOI: 10.6084/m9.figshare.7700102.v4
title: OCIM1 in JLD2 format

description: This file contains the Ocean Circulation Inverse Model (OCIM 1.1), converted from MATLAB's MAT format to Julia's JLD2 format.<br>The code used to create the JLD2 file uploaded here is located in the GitHub code repository of the same name as this data repository (https://github.com/briochemc/AIBECS_circulations).<br>It uses the DataDeps.jl package to download and locally store the original MATLAB OCIM files, the MAT.jl package to load the MAT file in Julia, and the JLD2 package to save the file locally as a JLD2 file. The JLD2 files were then uploaded on FigShare manually.<br>Note that OCIM 1.1 was not created by me (BP) — I only downloaded and converted the MAT file into a JLD2 file.<br>Please see DeVries (2014) Table 1 for details and reference this paper as well as DeVries and Primeau (2011) when using the OCIM 1.1. <br><br>I believe that the grant information for the creation of OCIM can be found in those references.<br>The license I attached is the MIT but I actually do not know if this is the correct one I should attach here as I was not involved in the original MATLAB files of the OCIM 1.1.<br>In the future, this repository will likely disappear and AIBECS will directly download the MAT files from a data repository owned by Tim DeVries and convert them on the fly.<br>
DOI: 10.7284/117241
title: Expendable Probe data collected during research cruise AT26-30 using a Sippican MK12 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7700102.v3
title: OCIM1 in JLD2 format

description: OCIM1 MATLAB file converted to JLD2 format for use in Julia.
DOI: 10.7284/117239
title: Fluorometer data collected during research cruise AT26-30 using a WET Labs WETStar instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.26180/5c6df45289d38
title: MPN_Trips_wave5_access_health_anon_PNAS.sav

description: This is a sub-set of the Netherlands Mobility Panel (MPN) a longitudinal household travel survey. It includes a three-day travel diary. This sub-set includes over 1,500 adults from across The Netherlands who filled out a supplementary survey that included a measure of satisfaction with life and self-rated health.<br>This version of the dataset has been anonymized so that individuals cannot be identified. It has largely been translated into English.
DOI: 10.6084/m9.figshare.7700051.v1
title: Self-administered Life History Calendar instrument assessing adolescent sexual risk-taking

description: Study: <b>Development of a Brief Sexual Health History Calendar for Youth</b><br>This project aimed to develop and tested a mixed-method sexual risk assessment for adolescents at a public teen health clinic serving underinsured and uninsured adolescents. Study Phase One assessed the clinical feasibility and utility as well as youth appraisal of the instrument compared to the standard clinical patient survey. In Phase Two, the LHC instrument was adapted based on youth feedback to incorporate a brief behavior change component.
DOI: 10.6084/m9.figshare.7700030
title: Dingo Cat and Prey abundance along road transects.xlsx

description: Feit et al. (2019) Apex predators' decouple population dynamics between mesopredators and their prey. Ecosystems <br>Abundance data for dingoes, cats and prey along road transects on either side of the Dingo Fence in the Strzelecki Desert, Australia.<br>We indexed the abundance of dingoes, feral cats, rabbits, and dusky hopping mice (<i>Notomys fuscus</i>) by conducting spotlight surveys at night along narrow (&lt;2 m wide) unmade roads within each of the study areas. During spotlight surveys, mammals were counted by an observer who scanned a 50 W spotlight while sitting on the roof of a 4-wheel-drive vehicle (circa 2.3 m above ground level) that was moving at approximately 15 km/h. Spotlight surveys commenced at dusk and varied in length from 10-30 km. The total length of spotlight transects conducted at each of the four sites during each sampling session was approximately 30 km. Abundance of rabbits and hopping mice is combined as prey abundance. <br>
DOI: 10.7284/117238
title: GNSS (Global Navigation Satellite System) data collected during research cruise AT26-30 using a C&C C-Nav 2050G instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7700030.v1
title: Dingo Cat and Prey abundance along road transects.xlsx

description: Feit et al. (2019) Apex predators' decouple population dynamics between mesopredators and their prey. Ecosystems <br>Abundance data for dingoes, cats and prey along road transects on either side of the Dingo Fence in the Strzelecki Desert, Australia.<br>We indexed the abundance of dingoes, feral cats, rabbits, and dusky hopping mice (<i>Notomys fuscus</i>) by conducting spotlight surveys at night along narrow (&lt;2 m wide) unmade roads within each of the study areas. During spotlight surveys, mammals were counted by an observer who scanned a 50 W spotlight while sitting on the roof of a 4-wheel-drive vehicle (circa 2.3 m above ground level) that was moving at approximately 15 km/h. Spotlight surveys commenced at dusk and varied in length from 10-30 km. The total length of spotlight transects conducted at each of the four sites during each sampling session was approximately 30 km. Abundance of rabbits and hopping mice is combined as prey abundance. <br>
DOI: 10.6084/m9.figshare.7700039.v1
title: Life History Calendar instrument assessing adolescent sexual identity development

description: HIV Risk and Sexual Identity Development<br><i><br></i><i>This mixed-method study invest</i><i>i</i><i>gated the impact of sexual identity development factors on HIV-related sexual risk among sexual minority youth emphasizing young men who have sex with men (YMSM). The LHC instrument was created by the PI to retrospectively assess LGBTQ youths' sexual identity development milestones and trajectories over a 15-year time period.</i>
DOI: 10.6084/m9.figshare.7700012
title: 2014-2015 TCAP ABB mid-Atlantic Virginia

description: Genotypic, phenotypic, and covariate SNP data collected on a panel of soft winter wheat grown in Blacksburg, Virginia and Warsaw, Virginia in the 2013-2014 and 2014-2015 winter wheat growing seasons as part of the USDA-NIFA Tritaceae Coordinated Agricultural Project (TCAP) mid-Atlantic allele-based breeding (ABB) panel.<br><br>Genotypic data is supplied in variant call format (VCF) files, both unimputed and following imputation with Beagle 4.1. Unimputed genotypic data was filtered to remove SNPs with minor allele frequency &lt; 5%, &gt; 50% missing data content, or with &gt; 15% heterozygous calls. Following imputation, the genotypic data was refiltered for minor allele frequency and portion of heterozygous calls using the same thresholds listed above. The imputed data was thinned to only retain a single SNP in groups of SNPs in perfect linkage disequilibrium (r2 = 1).<br><br>Phenotypic data consists of one file of raw plot observations, and one file of fitted values generated by performing spatial corrections using the 'SpATS' package in R. Trait abbreviations are as follows: FLSG flag leaf stay green; GSQM grains per square meter; GW grain weight; HD heading date; HT plant height; MAT physiological maturity date; NDVI normalized-difference vegetation index at Zadok’s GS25; PROT wet chemistry-validated whole-grain protein content; SPH seeds per head; SSQM spikes per square meter; STARCH whole-grain starch content; TKW thousand kernel weight; TWT test weight; YLD grain yield.<br>Covariate SNP data from KASP assays is provided in a VCF file, where a 0/0 denotes the homozygous wild-type state, 0/1 denotes the heterozygous state, and 1/1 denotes the homozygous "mutant" or "positive" state.<br>
DOI: 10.6084/m9.figshare.7700051.v2
title: Self-administered Life History Calendar instrument assessing adolescent sexual risk-taking

description: Study: <b>Development of a Brief Sexual Health History Calendar for Youth</b><br>This project aimed to develop and tested a mixed-method sexual risk assessment for adolescents at a public teen health clinic serving underinsured and uninsured adolescents. Study Phase One assessed the clinical feasibility and utility as well as youth appraisal of the instrument compared to the standard clinical patient survey. In Phase Two, the LHC instrument was adapted based on youth feedback to incorporate a brief behavior change component.
DOI: 10.6084/m9.figshare.7700039.v2
title: Interviewer-administered Life History Calendar instrument assessing adolescent sexual identity development

description: HIV Risk and Sexual Identity Development<br><i><br></i><i>This mixed-method study invest</i><i>i</i><i>gated the impact of sexual identity development factors on HIV-related sexual risk among sexual minority youth emphasizing young men who have sex with men (YMSM). The LHC instrument was created by the PI to retrospectively assess LGBTQ youths' sexual identity development milestones and trajectories over a 15-year time period.</i>
DOI: 10.7284/117245
title: Meteorological Station data collected during research cruise AT26-30 using a Vaisala WXT520 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7700012.v1
title: 2014-2015 TCAP ABB mid-Atlantic Virginia

description: Genotypic, phenotypic, and covariate SNP data collected on a panel of soft winter wheat grown in Blacksburg, Virginia and Warsaw, Virginia in the 2013-2014 and 2014-2015 winter wheat growing seasons as part of the USDA-NIFA Tritaceae Coordinated Agricultural Project (TCAP) mid-Atlantic allele-based breeding (ABB) panel.<br><br>Genotypic data is supplied in variant call format (VCF) files, both unimputed and following imputation with Beagle 4.1. Unimputed genotypic data was filtered to remove SNPs with minor allele frequency &lt; 5%, &gt; 50% missing data content, or with &gt; 15% heterozygous calls. Following imputation, the genotypic data was refiltered for minor allele frequency and portion of heterozygous calls using the same thresholds listed above. The imputed data was thinned to only retain a single SNP in groups of SNPs in perfect linkage disequilibrium (r2 = 1).<br><br>Phenotypic data consists of one file of raw plot observations, and one file of fitted values generated by performing spatial corrections using the 'SpATS' package in R. Trait abbreviations are as follows: FLSG flag leaf stay green; GSQM grains per square meter; GW grain weight; HD heading date; HT plant height; MAT physiological maturity date; NDVI normalized-difference vegetation index at Zadok’s GS25; PROT wet chemistry-validated whole-grain protein content; SPH seeds per head; SSQM spikes per square meter; STARCH whole-grain starch content; TKW thousand kernel weight; TWT test weight; YLD grain yield.<br>Covariate SNP data from KASP assays is provided in a VCF file, where a 0/0 denotes the homozygous wild-type state, 0/1 denotes the heterozygous state, and 1/1 denotes the homozygous "mutant" or "positive" state.<br>
DOI: 10.6084/m9.figshare.7700039.v3
title: Interviewer-administered Life History Calendar instrument assessing adolescent sexual identity development

description: HIV Risk and Sexual Identity Development<br><i><br></i><i>This mixed-method study invest</i><i>i</i><i>gated the impact of sexual identity development factors on HIV-related sexual risk among sexual minority youth emphasizing young men who have sex with men (YMSM). The LHC instrument was created by the PI to retrospectively assess LGBTQ youths' sexual identity development milestones and trajectories over a 15-year time period.</i>
DOI: 10.7284/117246
title: Meteorological Station data collected during research cruise AT26-30 using a Vaisala WXT520 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7699955
title: When is a harmonic mean p-value a Bayes factor?

description: Figure 1 of Wilson (2019) When is a harmonic mean p-value a Bayes factor?, in response to Held (2019) On the Bayesian interpretation of the harmonic mean p-value.
DOI: 10.6084/m9.figshare.7700039.v4
title: Test

description: Test description
DOI: 10.7284/117244
title: Multibeam Echosounder data collected during research cruise AT26-30 using a Kongsberg EM122 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/117247
title: Radiometer data collected during research cruise AT26-30 using a Eppley PIR instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7699955.v1
title: When is the harmonic mean p-value a Bayes factor?

description: Figure 1 of Wilson (2019) When is the harmonic mean p-value a Bayes factor?, in response to Held (2019) On the Bayesian interpretation of the harmonic mean p-value.
DOI: 10.6084/m9.figshare.7699937
title: sup. Table S4

description: 5mC and 5hmC genes in the aetiology of dilated cardiomyopathy
DOI: 10.6084/m9.figshare.7699955.v3
title: When is a harmonic mean p-value a Bayes factor?

description: Figure 1 of Wilson (2019) When is a harmonic mean p-value a Bayes factor?, in response to Held (2019) On the Bayesian interpretation of the harmonic mean p-value.
DOI: 10.6084/m9.figshare.7699910
title: 2DMatPedia, An open computational database of two-dimensional materials from top-down and bottom-up approaches

description: We present a large dataset of 2D materials, with more than 6,000 monolayer structures, obtained from both top-down and bottom-up discovery procedures. First, we screened all bulk materials in the database of Materials Project for layered structures by a topology-based algorithm and theoretically exfoliate them into monolayers. Then, we generated new 2D materials by chemical substitution of elements in known 2D materials by others from the same group in the periodic table. The structural, electronic and energetic properties of these 2D materials are consistently calculated, to provide a starting point for further material screening, data mining, data analysis and artificial intelligence applications.
DOI: 10.7284/117248
title: Radiometer data collected during research cruise AT26-30 using a Eppley PSP instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7699937.v2
title: sup. Table S4

description: 5mC and 5hmC genes in the aetiology of dilated cardiomyopathy
DOI: 10.6084/m9.figshare.7699955.v2
title: When is a harmonic mean p-value not a Bayes factor?

description: Figure 1 of Wilson (2019) When is a harmonic mean p-value not a Bayes factor?, in response to Held (2019) On the Bayesian interpretation of the harmonic mean p-value.
DOI: 10.7284/117251
title: Multiplexed data collected during research cruise AT26-31 using a WHOI Calliope instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7699910.v1
title: 2DMatPedia: An open computational database of two-dimensional materials from top-down and bottom-up approaches

description: We present a large dataset of 2D materials, with more than 6,000 monolayer structures, obtained from both top-down and bottom-up discovery procedures. First, we screened all bulk materials in the database of Materials Project for layered structures by a topology-based algorithm and theoretically exfoliate them into monolayers. Then, we generated new 2D materials by chemical substitution of elements in known 2D materials by others from the same group in the periodic table. The structural, electronic and energetic properties of these 2D materials are consistently calculated, to provide a starting point for further material screening, data mining, data analysis and artificial intelligence applications.
DOI: 10.6084/m9.figshare.7699937.v1
title: sup. Table T4

description: 5mC and 5hmC genes in the aetiology of dilated cardiomyopathy
DOI: 10.7284/117252
title: Expendable Probe data collected during research cruise AT26-31 using a Sippican MK12 instrument system onboard the platform RV Atlantis

description: Original (unprocessed) data collected during a Field_expedition