cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.7356518.v1
title: Epigallocatechin-3-gallate location and interaction with late endosomal and plasma membrane model membranes by molecular dynamics

description: Epigallocatechin-3-gallate (EGCG) is the most abundant polyphenol in green tea and it has been reported to have many beneficial properties against many different types of illnesses and infections. However, the exact mechanism/s underlying its biological effects are unknown. It has been previously shown that EGCG is capable of binding to and disrupting the membrane, so that some of its effects on biological systems could be ascribed to its capacity to incorporate into the biological membrane and modulate its structure. In this work, we have used atomistic molecular dynamics (MD) to discern the location and orientation of EGCG in model membranes and the possible existence of specific interactions with membrane lipids. For that goal, we have used in our simulation two complex model membranes, one resembling the plasma membrane (PM) and the other one the late endosome (LE) membrane. Our results support that EGCG tends to associate with the membrane and exists inside it in a relatively stable and steady location with a low propensity to be associated with other EGCG molecules. Interestingly, EGCG forms hydrogen bonds with POPC and POPE in the PM system but POPC and BMP and no POPE in the LE. These data suggest that the broad beneficial effects of EGCG could be mediated, at least in part, through its membranotropic effects and therefore membrane functioning. Communicated by Ramaswamy H. Sarma
DOI: 10.6084/m9.figshare.7356509.v1
title: Complete mitochondrial genome of Japalura flaviceps: Deep insights into the phylogeny and gene rearrangements of Agamidae species

description: <b>Table S1 </b>The PCR amplification primers used in this study. <b>Table S2 </b>The best partitioning schemes and nucleotide substitution models for mitochondrial data matrix. <b>Fig. S1. </b>Inferred secondary structures of tRNA genes in<i> Japalura flaviceps</i> mitogenome.
DOI: 10.7284/116503
title: Barometer data collected during research cruise PE14-12 using a Vaisala PTB101B instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/124638
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PE14-12 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/120607
title: Fluorometer data collected during research cruise PE14-12 using a Turner 10-AU instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/112402
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-12 using a Trimble 4000DL instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116536
title: Hygrometer data collected during research cruise PE14-12 using a Vaisala HMP45 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116591
title: Meteorological Station data collected during research cruise PE14-12 using a CWS Magellan instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356452
title: Anopheles stephensi APL1 SHAMAN repository

description: This repository includes all data files necessary to reproduce the results of bacterial differential abundance analysis in Anopheles stephensi depleted of APL1 (Mitri et al.) using the SHAMAN workflow. Step by step SHAMAN guide in "How to use SHAMAN workflow".<br>
DOI: 10.7284/112401
title: Transmissometer data collected during research cruise PE14-12 using a WET Labs C-Star instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356443
title: Automated Low-cost Terrestrial Laser Scanner for Measuring Diameters at Breast Height and Heights of Plantation Trees

description: data of plot1 and JiuFeng plot1 which were scanned by the low-cost scanner.
DOI: 10.7284/112398
title: TSG (Thermosalinograph) data collected during research cruise PE14-12 using a Sea-Bird SBE-21 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356443.v2
title: Automated Low-cost Terrestrial Laser Scanner for Measuring Diameters at Breast Height and Heights of Plantation Trees

description: data of plot1 and JiuFeng plot1 which were scanned by the low-cost scanner.
DOI: 10.7284/116655
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-13 using a Trimble 4000DL instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356443.v1
title: Automated Low-cost Terrestrial Laser Scanner for Measuring Diameters at Breast Height and Heights of Plantation Trees

description: data of plot1 and JiuFeng plot1 which were scanned by the low-cost scanner.
DOI: 10.7284/116664
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PE14-14 using a RDI OS-75 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116667
title: Anemometer data collected during research cruise PE14-14 using a RM Young 50260 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116670
title: Barometer data collected during research cruise PE14-14 using a Vaisala PTB101B instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/124640
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PE14-14 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116910
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-14 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116911
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-14 using a Trimble SPS351 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116673
title: Gyrocompass data collected during research cruise PE14-14 using a Sperry NAVIGAT X MK 1 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116671
title: Hygrometer data collected during research cruise PE14-14 using a Vaisala HMP45 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116672
title: Meteorological Station data collected during research cruise PE14-14 using a CWS Magellan instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/120609
title: Fluorometer data collected during research cruise PE14-15 using a Turner 10-AU instrument system onboard the platform RV Pelican
DOI: 10.7284/116912
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-15 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116913
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-15 using a Trimble SPS351 instrument system onboard the platform RV Pelican
DOI: 10.7284/116914
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-16 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116915
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-16 using a Trimble SPS351 instrument system onboard the platform RV Pelican
DOI: 10.7284/116916
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-17 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116917
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-17 using a Trimble SPS351 instrument system onboard the platform RV Pelican
DOI: 10.7284/116918
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-18A using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116919
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-18A using a Trimble SPS351 instrument system onboard the platform RV Pelican
DOI: 10.7284/116932
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-18B using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116933
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-18B using a Trimble SPS351 instrument system onboard the platform RV Pelican
DOI: 10.7284/116712
title: Anemometer data collected during research cruise PE14-19 using a RM Young 50260 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116715
title: Barometer data collected during research cruise PE14-19 using a Vaisala PTB101B instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356197
title: Neocucurbitacin D, a novel lactone-type norcucurbitacin as xanthine oxidase inhibitor from <i>Herpetospermum pedunculosum</i>

description: A novel lactone-type norcucurbitacin, designated as neocucurbitacin D (<b>1</b>), together with five known cucurbitane triterpenes were isolated from traditional Tibetan medicine “Se Ji Mei Duo”, which is the seed of <i>Herpetospermum pedunculosum</i> (Ser.) C.B. Clarke. The structure of neocucurbitacin D was elucidated by spectroscopic analysis, including 2D NMR and X-ray techniques. Compounds <b>1–6</b> were screened for their xanthine oxidase (XOD) inhibitory activity. Compound <b>1, 2</b> and <b>4</b> exhibited significant XOD inhibition with IC<sub>50</sub> values ranging from 10.16 to 18.41 μM. The absolute stereochemistry and XOD inhibitiory activity of lactone-type norcucurbitacins was reported firstly.
DOI: 10.6084/m9.figshare.7356197.v2
title: Neocucurbitacin D, a novel lactone-type norcucurbitacin as xanthine oxidase inhibitor from <i>Herpetospermum pedunculosum</i>

description: A novel lactone-type norcucurbitacin, designated as neocucurbitacin D (<b>1</b>), together with five known cucurbitane triterpenes were isolated from traditional Tibetan medicine “Se Ji Mei Duo”, which is the seed of <i>Herpetospermum pedunculosum</i> (Ser.) C.B. Clarke. The structure of neocucurbitacin D was elucidated by spectroscopic analysis, including 2D NMR and X-ray techniques. Compounds <b>1–6</b> were screened for their xanthine oxidase (XOD) inhibitory activity. Compound <b>1, 2</b> and <b>4</b> exhibited significant XOD inhibition with IC<sub>50</sub> values ranging from 10.16 to 18.41 μM. The absolute stereochemistry and XOD inhibitiory activity of lactone-type norcucurbitacins was reported firstly.
DOI: 10.7284/116920
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-19 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356191
title: Trogons Concatenated Alignment

description: Compresed nexus file containing concatenated alignment from 3581 UCE loci of 18 trogon species. Character sets are specified in the sets block of the nexus file.
DOI: 10.7284/116921
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-19 using a Trimble SPS351 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7356191.v1
title: Trogons Concatenated Alignment

description: Compresed nexus file containing concatenated alignment from 3581 UCE loci of 18 trogon species. Character sets are specified in the sets block of the nexus file.
DOI: 10.7284/116718
title: Gyrocompass data collected during research cruise PE14-19 using a Sperry NAVIGAT X MK 1 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116716
title: Hygrometer data collected during research cruise PE14-19 using a Vaisala HMP45 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116717
title: Meteorological Station data collected during research cruise PE14-19 using a CWS Magellan instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/120613
title: Fluorometer data collected during research cruise PE14-20 using a Turner 10-AU instrument system onboard the platform RV Pelican
DOI: 10.7284/116922
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-20 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116923
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-20 using a Trimble SPS351 instrument system onboard the platform RV Pelican
DOI: 10.7284/120614
title: Fluorometer data collected during research cruise PE14-21 using a Turner 10-AU instrument system onboard the platform RV Pelican
DOI: 10.7284/116924
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-21 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116925
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-21 using a Trimble SPS351 instrument system onboard the platform RV Pelican
DOI: 10.7284/116747
title: Barometer data collected during research cruise PE14-22 using a Vaisala PTB101B instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/124645
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PE14-22 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/120615
title: Fluorometer data collected during research cruise PE14-22 using a Turner 10-AU instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116926
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-22 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116927
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-22 using a Trimble SPS351 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116750
title: Gyrocompass data collected during research cruise PE14-22 using a Sperry NAVIGAT X MK 1 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116748
title: Hygrometer data collected during research cruise PE14-22 using a Vaisala HMP45 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116749
title: Meteorological Station data collected during research cruise PE14-22 using a CWS Magellan instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116744
title: Transmissometer data collected during research cruise PE14-22 using a WET Labs C-Star instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116741
title: TSG (Thermosalinograph) data collected during research cruise PE14-22 using a Sea-Bird SBE-21 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/120616
title: Fluorometer data collected during research cruise PE14-23 using a Turner 10-AU instrument system onboard the platform RV Pelican
DOI: 10.7284/116928
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-23 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116929
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-23 using a Trimble SPS351 instrument system onboard the platform RV Pelican
DOI: 10.7284/116763
title: Anemometer data collected during research cruise PE14-24 using a RM Young 50260 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116766
title: Barometer data collected during research cruise PE14-24 using a Vaisala PTB101B instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/124647
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PE14-24 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/120617
title: Fluorometer data collected during research cruise PE14-24 using a Turner 10-AU instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116930
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-24 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116931
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-24 using a Trimble SPS351 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116769
title: Gyrocompass data collected during research cruise PE14-24 using a Sperry NAVIGAT X MK 1 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116767
title: Hygrometer data collected during research cruise PE14-24 using a Vaisala HMP45 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116768
title: Meteorological Station data collected during research cruise PE14-24 using a CWS Magellan instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116762
title: Transmissometer data collected during research cruise PE14-24 using a WET Labs C-Star instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116760
title: TSG (Thermosalinograph) data collected during research cruise PE14-24 using a Sea-Bird SBE-21 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/120618
title: Fluorometer data collected during research cruise PE14-25 using a Turner 10-AU instrument system onboard the platform RV Pelican
DOI: 10.7284/116934
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-25 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116935
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-25 using a Trimble SPS351 instrument system onboard the platform RV Pelican
DOI: 10.7284/120619
title: Fluorometer data collected during research cruise PE14-26 using a Turner 10-AU instrument system onboard the platform RV Pelican
DOI: 10.7284/116936
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-26 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116937
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE14-26 using a Trimble SPS351 instrument system onboard the platform RV Pelican
DOI: 10.7284/120620
title: Fluorometer data collected during research cruise PE15-01 using a Turner 10-AU instrument system onboard the platform RV Pelican
DOI: 10.6084/m9.figshare.7355861
title: ★2018.1.10 確定ver.xlsx

description: Various studies have been previously conducted on the diagnosis of lymphadenopathy as benign or malignant, but, in those studies to date, the results varied among studies. Those studies were not described to inter-rater agreement on the EUS features of lymphadenopathy. In this study, we evaluated inter-rater agreement on the EUS features and we proposed EUS diagnostic criteria for lymphadenopathy based on inter-rater agreement.
DOI: 10.6084/m9.figshare.7355861.v1
title: ★2018.1.10 確定ver.xlsx

description: Various studies have been previously conducted on the diagnosis of lymphadenopathy as benign or malignant, but, in those studies to date, the results varied among studies. Those studies were not described to inter-rater agreement on the EUS features of lymphadenopathy. In this study, we evaluated inter-rater agreement on the EUS features and we proposed EUS diagnostic criteria for lymphadenopathy based on inter-rater agreement.
DOI: 10.7284/116938
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE15-01 using a Trimble DSM232 instrument system onboard the platform RV Pelican

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/116939
title: GNSS (Global Navigation Satellite System) data collected during research cruise PE15-01 using a Trimble SPS351 instrument system onboard the platform RV Pelican
DOI: 10.7284/120621
title: Fluorometer data collected during research cruise PE15-02 using a Turner 10-AU instrument system onboard the platform RV Pelican
DOI: 10.6084/m9.figshare.7355828
title: Additional file 2: of Taxonomic classification for microbiome analysis, which correlates well with the metabolite milieu of the gut

description: Principal component loading of each metabolite for metabolome first principal component (PC1). (XLSX 17 kb)