cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5066/p9onsnah
title: Gravity data from the Truxton area, northwestern Arizona

description: This dataset represents the network-adjusted results of relative- and absolute-gravity surveys. Data are provided in tabular (csv) and vector (shapefile) formats with one row per station.Relative-gravity surveys were carried out using a ZLS Coporation Burris relative-gravity meter. The effect of solid Earth tides and ocean loading were removed from the data. Instrument drift was removed by evaluating gravity change during repeated measurements at one or more base stations, or between absolute-gravity stations. Absolute-gravity surveys were carried out using a Micro-g LaCoste, Inc. A-10 absolute-gravity meter. The vertical gravity gradient was assumed to be -3 microGal/cm at each absolute-gravity site. Relative-gravity differences and absolute-gravity data were combined using a least-squares network adjustment, as implemented in the software Gravnet (Hwang, C., Wang, C., Lee, L., 2002. Adjustment of relative gravity measurements using weighted and datum-free constraints. Comput. Geosci. 28, 1005?1015). Data pre- and post-processing were carried out using GSadjust (https://github.com/jkennedy-usgs/GSadjust). The dataset includes standard gravity corrections (free air, Bouguer slab, and terrain) and values for complete Bouguer anomaly.
DOI: 10.6084/m9.figshare.14176180
title: Additional file 11 of Assessing the genetic background and genomic relatedness of red cattle populations originating from Northern Europe

description: Additional file 11: Table S5. Negative z-scores obtained from the f3-statistics in THREEPOP.
DOI: 10.6084/m9.figshare.14176180.v1
title: Additional file 11 of Assessing the genetic background and genomic relatedness of red cattle populations originating from Northern Europe

description: Additional file 11: Table S5. Negative z-scores obtained from the f3-statistics in THREEPOP.
DOI: 10.6084/m9.figshare.14176186.v1
title: Additional file 13 of Assessing the genetic background and genomic relatedness of red cattle populations originating from Northern Europe

description: Additional file 13: Table S7. Full list of annotated genes located in genomic regions detected as putative selection signatures.
DOI: 10.6084/m9.figshare.14176186
title: Additional file 13 of Assessing the genetic background and genomic relatedness of red cattle populations originating from Northern Europe

description: Additional file 13: Table S7. Full list of annotated genes located in genomic regions detected as putative selection signatures.
DOI: 10.6084/m9.figshare.14176232
title: Additional file 1 of Prenatal testosterone triggers long-term behavioral changes in male zebra finches: unravelling the neurogenomic mechanisms

description: Additional file 1: Table S1. Differentially expressed genes between testosterone and control treatment groups. Table S2. Results of a gene ontology biological process statistical enrichment test for differentially expressed genes. Table S3. Results of a gene ontology statistical enrichment test for differentially expressed genes in the male hypothalamus protein-protein interaction subnetwork. Table S4. Differentially methylated CG regions between testosterone and control treatment groups. Table S5. Differentially methylated CH regions between testosterone and control treatment groups. Table S6. Results of a gene ontology statistical enrichment test for genes with differentially methylated CG regions in the male hypothalamus. Table S7. Genes with both differential methylation and mRNA expression between control and testosterone treatments. Table S8. RNA-Seq mapping statistics. Table S9. MethylC-seq mapping statistics.
DOI: 10.6084/m9.figshare.14176232.v1
title: Additional file 1 of Prenatal testosterone triggers long-term behavioral changes in male zebra finches: unravelling the neurogenomic mechanisms

description: Additional file 1: Table S1. Differentially expressed genes between testosterone and control treatment groups. Table S2. Results of a gene ontology biological process statistical enrichment test for differentially expressed genes. Table S3. Results of a gene ontology statistical enrichment test for differentially expressed genes in the male hypothalamus protein-protein interaction subnetwork. Table S4. Differentially methylated CG regions between testosterone and control treatment groups. Table S5. Differentially methylated CH regions between testosterone and control treatment groups. Table S6. Results of a gene ontology statistical enrichment test for genes with differentially methylated CG regions in the male hypothalamus. Table S7. Genes with both differential methylation and mRNA expression between control and testosterone treatments. Table S8. RNA-Seq mapping statistics. Table S9. MethylC-seq mapping statistics.
DOI: 10.6084/m9.figshare.14176265
title: Additional file 1 of Relationship between neutrophils to HDL-C ratio and severity of coronary stenosis

description: Additional file 1: Figure 1. Relationship between serological indicators and Gensini score.
DOI: 10.6084/m9.figshare.14176265.v1
title: Additional file 1 of Relationship between neutrophils to HDL-C ratio and severity of coronary stenosis

description: Additional file 1: Figure 1. Relationship between serological indicators and Gensini score.
DOI: 10.6084/m9.figshare.14176270
title: Additional file 11 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 11. Four tables containing the abbreviations and full names of the genes contained in the tables in Additional file 9 (KEGG pathways and GO categories).
DOI: 10.6084/m9.figshare.14176270.v1
title: Additional file 11 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 11. Four tables containing the abbreviations and full names of the genes contained in the tables in Additional file 9 (KEGG pathways and GO categories).
DOI: 10.6084/m9.figshare.14176273.v1
title: Additional file 1 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 1. Characteristics of the identified miRNAs (CoPS vs. H). Detailed table of miRNAs detected in all investigated samples with the use of the UEA sRNA Workbench software. “NA” denotes potentially novel miRNAs identified in this study.
DOI: 10.6084/m9.figshare.14176276
title: Additional file 2 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 2. Characteristics of the identified miRNAs (CoNS vs. H). Detailed table of miRNAs detected in all investigated samples with the use of the UEA sRNA Workbench software. “NA” denotes potentially novel miRNAs identified in this study.
DOI: 10.6084/m9.figshare.14176276.v1
title: Additional file 2 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 2. Characteristics of the identified miRNAs (CoNS vs. H). Detailed table of miRNAs detected in all investigated samples with the use of the UEA sRNA Workbench software. “NA” denotes potentially novel miRNAs identified in this study.
DOI: 10.6084/m9.figshare.14176279
title: Additional file 3 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 3. Results of the differential expression analysis using the DESeq2 algorithm (CoPS vs. H). “baseMean” is the mean of normalized counts of all samples; “log2FoldChange” denotes the binary logarithm of the Fold Change parameter; “lfcSE” denotes log fold change Standard Error; “stat” stands for Wald statistics, that is, the log fold change divided by its standard error; “padj” denotes adjusted p-value; “NA” in the miRBAse ID column stands for potentially new miRNAs identified in this study.
DOI: 10.6084/m9.figshare.14176279.v1
title: Additional file 3 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 3. Results of the differential expression analysis using the DESeq2 algorithm (CoPS vs. H). “baseMean” is the mean of normalized counts of all samples; “log2FoldChange” denotes the binary logarithm of the Fold Change parameter; “lfcSE” denotes log fold change Standard Error; “stat” stands for Wald statistics, that is, the log fold change divided by its standard error; “padj” denotes adjusted p-value; “NA” in the miRBAse ID column stands for potentially new miRNAs identified in this study.
DOI: 10.6084/m9.figshare.14176273
title: Additional file 1 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 1. Characteristics of the identified miRNAs (CoPS vs. H). Detailed table of miRNAs detected in all investigated samples with the use of the UEA sRNA Workbench software. “NA” denotes potentially novel miRNAs identified in this study.
DOI: 10.6084/m9.figshare.14176282
title: Additional file 4 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 4. The sequences and names of unique and common miRNA genes between comparisons.
DOI: 10.6084/m9.figshare.14176282.v1
title: Additional file 4 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 4. The sequences and names of unique and common miRNA genes between comparisons.
DOI: 10.6084/m9.figshare.14176285
title: Additional file 5 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 5. Results of the differential expression analysis using the DESeq2 algorithm (CoNS vs. H). “baseMean” is the mean of normalized counts of all samples; “log2FoldChange” denotes the binary logarithm of the Fold Change parameter; “lfcSE” denotes log fold change Standard Error; “stat” stands for Wald statistics, that is, the log fold change divided by its standard error; “padj” denotes adjusted p-value; “NA” in the miRBAse ID column stands for potentially new miRNAs identified in this study.
DOI: 10.6084/m9.figshare.14176285.v1
title: Additional file 5 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 5. Results of the differential expression analysis using the DESeq2 algorithm (CoNS vs. H). “baseMean” is the mean of normalized counts of all samples; “log2FoldChange” denotes the binary logarithm of the Fold Change parameter; “lfcSE” denotes log fold change Standard Error; “stat” stands for Wald statistics, that is, the log fold change divided by its standard error; “padj” denotes adjusted p-value; “NA” in the miRBAse ID column stands for potentially new miRNAs identified in this study.
DOI: 10.6084/m9.figshare.14176288
title: Additional file 6 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 6. List of KEGG pathways enriched by the detected differentially expressed miRNAs (p-value ≤ 0.05) (CoPS vs. H).
DOI: 10.6084/m9.figshare.14176288.v1
title: Additional file 6 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 6. List of KEGG pathways enriched by the detected differentially expressed miRNAs (p-value ≤ 0.05) (CoPS vs. H).
DOI: 10.6084/m9.figshare.14176291
title: Additional file 7 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 7. List of KEGG terms enriched by the identified differentially expressed miRNAs (p-value ≤ 0.05) (CoNS vs. H).
DOI: 10.6084/m9.figshare.14176294
title: Additional file 8 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 8. List of GO pathways enriched by the detected differentially expressed miRNAs (p-value ≤ 0.05) (CoPS vs. H).
DOI: 10.6084/m9.figshare.14176297
title: Additional file 9 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 9. List of GO terms enriched by the identified differentially expressed miRNAs (p-value≤0.05) (CoNS vs. H).
DOI: 10.6084/m9.figshare.14176291.v1
title: Additional file 7 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 7. List of KEGG terms enriched by the identified differentially expressed miRNAs (p-value ≤ 0.05) (CoNS vs. H).
DOI: 10.6084/m9.figshare.14176294.v1
title: Additional file 8 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 8. List of GO pathways enriched by the detected differentially expressed miRNAs (p-value ≤ 0.05) (CoPS vs. H).
DOI: 10.6084/m9.figshare.14176297.v1
title: Additional file 9 of MicroRNA expression profile in bovine mammary gland parenchyma infected by coagulase-positive or coagulase-negative staphylococci

description: Additional file 9. List of GO terms enriched by the identified differentially expressed miRNAs (p-value≤0.05) (CoNS vs. H).
DOI: 10.6084/m9.figshare.14176300.v1
title: Additional file 1 of Comparison of methodologies used to determine aromatic lignin unit ratios in lignocellulosic biomass

description: Additional file 1. S/G ratios determined by different methods, thioacidolysis yields, lignin content estimates, relative lignin linkage abundances and py-MBMS spectral peak TIC-normalized intensities for each sample analyzed in this study.
DOI: 10.6084/m9.figshare.14176303
title: Additional file 2 of Comparison of methodologies used to determine aromatic lignin unit ratios in lignocellulosic biomass

description: Additional file 2. Pearson correlation coefficients for various characteristics measured in the poplar samples.
DOI: 10.6084/m9.figshare.14176303.v1
title: Additional file 2 of Comparison of methodologies used to determine aromatic lignin unit ratios in lignocellulosic biomass

description: Additional file 2. Pearson correlation coefficients for various characteristics measured in the poplar samples.
DOI: 10.6084/m9.figshare.14176306.v1
title: Additional file 3 of Comparison of methodologies used to determine aromatic lignin unit ratios in lignocellulosic biomass

description: Additional file 3. Pearson correlation coefficients for various characteristics determined using all samples in this study.
DOI: 10.6084/m9.figshare.14176300
title: Additional file 1 of Comparison of methodologies used to determine aromatic lignin unit ratios in lignocellulosic biomass

description: Additional file 1. S/G ratios determined by different methods, thioacidolysis yields, lignin content estimates, relative lignin linkage abundances and py-MBMS spectral peak TIC-normalized intensities for each sample analyzed in this study.
DOI: 10.6084/m9.figshare.14176306
title: Additional file 3 of Comparison of methodologies used to determine aromatic lignin unit ratios in lignocellulosic biomass

description: Additional file 3. Pearson correlation coefficients for various characteristics determined using all samples in this study.
DOI: 10.6084/m9.figshare.14176334
title: Additional file 2 of Impact of breastfeeding interventions among United States minority women on breastfeeding outcomes: a systematic review

description: Additional file 2. Studies' data extraction information.
DOI: 10.6084/m9.figshare.14176334.v1
title: Additional file 2 of Impact of breastfeeding interventions among United States minority women on breastfeeding outcomes: a systematic review

description: Additional file 2. Studies' data extraction information.
DOI: 10.6084/m9.figshare.14176340
title: Additional file 1 of Weight of evidence approach using a TK gene mutation assay with human TK6 cells for follow-up of positive results in Ames tests: a collaborative study by MMS/JEMS

description: Additional file 1.
DOI: 10.6084/m9.figshare.14176340.v1
title: Additional file 1 of Weight of evidence approach using a TK gene mutation assay with human TK6 cells for follow-up of positive results in Ames tests: a collaborative study by MMS/JEMS

description: Additional file 1.
DOI: 10.6084/m9.figshare.14176343
title: Additional file 2 of Weight of evidence approach using a TK gene mutation assay with human TK6 cells for follow-up of positive results in Ames tests: a collaborative study by MMS/JEMS

description: Additional file 2.
DOI: 10.6084/m9.figshare.14176343.v1
title: Additional file 2 of Weight of evidence approach using a TK gene mutation assay with human TK6 cells for follow-up of positive results in Ames tests: a collaborative study by MMS/JEMS

description: Additional file 2.
DOI: 10.6084/m9.figshare.14176346.v1
title: Additional file 3 of Weight of evidence approach using a TK gene mutation assay with human TK6 cells for follow-up of positive results in Ames tests: a collaborative study by MMS/JEMS

description: Additional file 3.
DOI: 10.6084/m9.figshare.14176346
title: Additional file 3 of Weight of evidence approach using a TK gene mutation assay with human TK6 cells for follow-up of positive results in Ames tests: a collaborative study by MMS/JEMS

description: Additional file 3.
DOI: 10.5066/p9vas8p7
title: Renesting propensity, intervals, and reproductive success data for the Northern Great Plains Piping Plover, a threatened shorebird species 2014-2016

description: This data set is part of a data release as a companion to a published manuscript titled &quot;Low renesting propensity and reproductive success make renesting unproductive for the Piping Plover, Charadrius melodus.&quot; The Condor: Ornithological Applications. Upon reproductive failure, many bird species may make a secondary attempt at nesting. This data set includes four tabular digital data files representing values related to renesting propensity, renesting intervals, renest reproductive success, and nest survival of Piping Plovers (Charadrius melodus). We followed nests and unique breeding adults from 2014 - 2016 in the Northern Great Plains of the US. This included river and reservoir habitats present on the Missouri River in North and South Dakota along with alkali wetlands in Eastern Montana, North Dakota, and South Dakota.
DOI: 10.6084/m9.figshare.12000255.v1
title: Raw data of gut microbiota in 1month, 3months, and 6months infants

description: This data was used in a study on effect of maternal antibiotics exposure on infants' gut microbiota.
DOI: 10.6084/m9.figshare.14176370
title: SCALE OF GENOTOXICITY OF ANTHRACENIC MOLECULES OF ALOE

description: SCALE OF GENOTOXICITY OF ANTHRACENIC MOLECULES OF ALOE This report aims to demonstrate the order of genotoxic potential of some natural anthracenic substances, Using a scale of genotoxicity obtained from computerized processing of molecular schemes and the result of data taken from scientific literature
DOI: 10.6084/m9.figshare.14176370.v1
title: SCALE OF GENOTOXICITY OF ANTHRACENIC MOLECULES OF ALOE

description: SCALE OF GENOTOXICITY OF ANTHRACENIC MOLECULES OF ALOE This report aims to demonstrate the order of genotoxic potential of some natural anthracenic substances, Using a scale of genotoxicity obtained from computerized processing of molecular schemes and the result of data taken from scientific literature
DOI: 10.13018/bmr30794
title: Solution structure of the HIV-1 PBS-segment
DOI: 10.6084/m9.figshare.5904022.v2
title: Qatar Metabolomics Study on Diabetes

description: The Qatar Metabolomics Study on Diabetes (QMDiab) is a type 2 diabetes case-control, which was conducted in 2012 at the Dermatology Department of Hamad Medical Corporation and the Weill Cornell Medical College in Doha, Qatar. The study was approved by the Institutional Review Boards of HMC and WCM-Q under research protocol number 11131/11. All study participants provided written informed consent.<br><br>Untargeted metabolomics measurements (LC/MS+, LC/MS-, and GC/MS) from plasma, urine, and saliva samples of 374 participants, which are aged 17-81 years, were performed by Metabolon Inc.<br><br>The OrigScale dataset comprises median-scaled data for each body fluid. The Preprocessed dataset comprises missing values treated, normalized, transformed, and scaled data. In both datasets, rows correspond to participants (anonymized) and columns correspond to metabolites. <br><br>Phenotype information (type 2 diabetes status, age, gender, BMI, ethnicity) are available as the last six columns of each dataset.<br>Annotations and pathway assigments are also provided for each metabolite.
DOI: 10.6084/m9.figshare.5904022.v3
title: Qatar Metabolomics Study on Diabetes

description: The Qatar Metabolomics Study on Diabetes (QMDiab) is a type 2 diabetes case-control, which was conducted in 2012 at the Dermatology Department of Hamad Medical Corporation and the Weill Cornell Medical College in Doha, Qatar. The study was approved by the Institutional Review Boards of HMC and WCM-Q under research protocol number 11131/11. All study participants provided written informed consent.<br><br>Untargeted metabolomics measurements (LC/MS+, LC/MS-, and GC/MS) from plasma, urine, and saliva samples of 374 participants, which are aged 17-81 years, were performed by Metabolon Inc.<br><br>The OrigScale dataset comprises median-scaled data for each body fluid. The Preprocessed dataset comprises missing values treated, normalized, transformed, and scaled data. In both datasets, rows correspond to participants (anonymized) and columns correspond to metabolites. <br><br>Phenotype information (type 2 diabetes status, age, gender, BMI, ethnicity) are available as the last six columns of each dataset.<br>Annotations and pathway assigments are also provided for each metabolite.
DOI: 10.6084/m9.figshare.5904022
title: Qatar Metabolomics Study on Diabetes

description: The Qatar Metabolomics Study on Diabetes (QMDiab) is a type 2 diabetes case-control, which was conducted in 2012 at the Dermatology Department of Hamad Medical Corporation and the Weill Cornell Medical College in Doha, Qatar. The study was approved by the Institutional Review Boards of HMC and WCM-Q under research protocol number 11131/11. All study participants provided written informed consent.<br><br>Untargeted metabolomics measurements (LC/MS+, LC/MS-, and GC/MS) from plasma, urine, and saliva samples of 374 participants, which are aged 17-81 years, were performed by Metabolon Inc.<br><br>The OrigScale dataset comprises median-scaled data for each body fluid. The Preprocessed dataset comprises missing values treated, normalized, transformed, and scaled data. In both datasets, rows correspond to participants (anonymized) and columns correspond to metabolites. <br><br>Phenotype information (type 2 diabetes status, age, gender, BMI, ethnicity) are available as the last six columns of each dataset.<br>Annotations and pathway assigments are also provided for each metabolite.