cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.21988409.v1
title: Humanitarian Events - Center Africa - 2017/2021

description: This dataset contains all the humanitarian events (crisis, armed clash, etc...) happened in central Africa from 2017 to 2012
DOI: 10.17632/fysfntftzf
title: Characterization of seaweed, wheat bran and other biosorbents

description: Ten biosorbents (pea skins (outer layer of peas), raspberry seeds, highbush blueberry pulp, blackcurrant pulp, wheat straw, seaweed Fucus vesiculosus, wheat bran, rye bran, peat and buckwheat husks) were analyzed. Characterization of biosorbents by FTIR (Nicolet iS50 spectrometer (Thermo Fisher Scientific, MA, US)), SEM (apparatus Thermo Scientific™ Helios™ 5 UX operated at 5 kV voltage and 0.1 nA current), ICP-MS (Agilent 7700 ICP-MS instrument with Mass Hunter Workstation software for ICP-MS, version B.01.03), GC-MS/MS (Shimadzu gas chromatograph GC-2010 Plus coupled with a TQ8040 mass spectrometer (Shimadzu, Kyoto, Japan)), UHPLC-MS/MS (UltiMate 3000 UHPLC system coupled to TSQ Quantiva mass spectrometer (Thermo Fisher Scientific, MA, USA) equipped with an electrospray ionization source), Py-GC/ MS/FID (Frontier Lab (Japan) MicroDouble-shot Pyrolyser Py-3030D directly coupled to a Shimadzu 2D FID/MS gas chromatography system MS-GC/GC–MS-2010 with a RTX-1701 capillary column). The nitrogen physisorption was performed using Micromeritics Tristar II equipment. In some files, the name of the biosorbent is given in Latvian or only the abbreviation is indicated, therefore please find a separate file, where names of biosorbents are given in Latvian, English, as well as the abbreviations. Title of the file - "List of biosorbents".
DOI: 10.6084/m9.figshare.15556914.v3
title: Emotional Intelligence Systematic Review

description: Emotional Intelligence (EI) is especially important for medical undergraduates due to the long undergraduate period and relatively high demands of the medical course. Determining associates of EI would not only enable identification of those who are most suited for the discipline of medicine but would also help in designing training strategies to target specific groups. However, there is diversity of opinion regarding the associates of EI in medical students.
DOI: 10.6084/m9.figshare.24417961.v1
title: Replication Package of "A Folklore Confirmation on the Removal of Dead Code"

description: It contains the raw data (see the file "RawData.xlsx") of the paper entitled "A Folklore Confirmation on the Removal of Dead Code" as well as some information on the studied software applications (see the file "StudiedApplication.pdf").
DOI: 10.6084/m9.figshare.23001785.v1
title: Additional file 16 of Comparison between 5 extractions methods in either plasma or serum to determine the optimal extraction and matrix combination for human metabolomics

description: Additional file 16. Table S12. Summary of matrix observed effects observed for labeled standard analytes across all extraction methods and LC-MS analyses. Not all analytes were successfully detected in plasma or serum. Matrix effect in the range of 0.80 &lt; ME &lt; 1.20 are considered as negligible and labelled as “no matrix effect”. ME values below 0.80 were considered as ion suppression, and those above 1.20 as ion enhancement. Empty boxes stands not detected. MeOH : methanol; MeOH:ACN : methanol combined with acetonitrile; ACN: acetonitrile; SPE : solid preparation extraction; ESI : electrospray ionisation; RP: reverse phase.
DOI: 10.6084/m9.figshare.8970689.v3
title: Supplementary data for the presence of metabolically relevant genes.

description: Identifications of relevant metabolically relevant genes in other organisms was performed with tblastx against the NCBI NT database (downloaded on 31.05.2017), with an evalue of 0.0001 and the option –max_target_seqs 1000000. For the operons three operons, the whole operon was used for the tblastx search, and presence of an operon was evaluated with a custom script by inspecting the co-occurrence of the genes within a range of 20.000 bp to each other. A gene was considered present if 25% of its basepairs had a match in the target genome. For all other genes, the coding sequence of the gene was used for the tblastx search.<br>This repository contains the result of the blast searches of all these genes/operons, as well as the python code which was used to evalute their presence/absence.<br>
DOI: 10.6084/m9.figshare.17810990.v1
title: Supplementary Material for: Normobaric Oxygen Therapy in Acute Stroke: A Systematic Review and Meta-Analysis

description: <b><i>Purpose:</i></b> Normobaric oxygen (NBO) is potentially a readily accessible neuroprotective therapy. We undertook a systematic review to assess NBO in acute stroke. <b><i>Methods:</i></b> MEDLINE, EMBASE, and CENTRAL databases were searched to December 2020. Randomized controlled trials of NBO administered &lt;7 days after stroke to normoxic patients with no other indication for oxygen were identified. Data on early neurological recovery; functional outcome; mortality; oxygen saturation, and imaging markers were collected. <b><i>Findings:</i></b> Fifteen publications involving 12 cohorts and 9,255 participants were identified. One study with 8,003 participants had low risk of bias, but the designs of smaller trials had limitations. Ninety-seven per cent of participants were in studies of low-flow oxygen (≤4 L/min). 82.8% had ischaemic stroke. Median time to treatment was 19.3 h. Meta-analysis demonstrated no significant effect on: reduction in National Institutes of Health Stroke Scale at 7 days in all stroke or ischaemic stroke only (mean difference −0.16 [−1.11 to 0.80] and −0.73 [−3.54 to 2.08], respectively); modified Rankin scale at 3–6 months of follow-up (combined standardized mean difference [SMD] −0.08 [−0.38 to 0.22]; 3 months SMD −0.01 [−0.03 to 0.029]; 6-month SMD −0.20 [−1.49 to 1.09]), or mortality (odds ratio 1.15 [0.87–1.53]). <b><i>Discussion:</i></b> The majority of patients were administered low-flow oxygen in the sub-acute phase. Intervention strategies targeted at modification of early tissue survival (higher oxygen delivery and administration at early time points when significant volumes of viable tissue persist) have not been tested adequately. <b><i>Conclusion:</i></b> Studies of NBO have shown no significant effect on early neurological recovery, functional outcome, or mortality in acute stroke. Oxygen has been predominantly low-flow and commenced in the sub-acute phase.
DOI: 10.6084/m9.figshare.24955839.v1
title: Genome annotation of <i>Grapholita funebrana</i>

description: gf.fasta.gz: Compressed file of genome assembly for Grapholita funebrana.gene_annotation.gff3: Gene annotationout.emapper.function_annotations.xlsx: Gene function annotation
DOI: 10.6084/m9.figshare.8273726.v3
title: Dataset 1

description: The FPKM values for <i>M. oryzae</i> and <i>O. sativa</i> transcriptome from all time points
DOI: 10.6084/m9.figshare.26984899.v1
title: metadata_Sanabria_updated_Mitsi_et_al_SciRep

description: Updated metadata table of Mitsi et al., Sci Rep (2023)
DOI: 10.6084/m9.figshare.28735103.v4
title: Dados para RSL em jornalismo com perspectiva de gênero

description: Este arquivo contém três planilhas, cujos dados se referem a artigos encontrados nas bases indexadoras DOAJ e SciELO, a partir dos seguintes termos: jornalismo com perspectiva de gênero; jornalismo AND perspectiva de gênero; jornalismo com enfoque de gênero; jornalismo AND enfoque de gênero; jornalismo feminista; jornalismo AND feminismo; jornalismo com perspectiva interseccional; jornalismo AND interseccional.
DOI: 10.6084/m9.figshare.28756929.v1
title: Additional file 1 of Results of the preclinical multicenter randomized controlled paclitaxel-induced neuropathy prevention replication study (PINPRICS)

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.c.3819226_d3.v1
title: MOESM3 of Using a vector pool containing variable-strength promoters to optimize protein production in Yarrowia lipolytica

description: Additional file 3: Data S1. Sequences of the genes used in this study.
DOI: 10.6084/m9.figshare.28781588.v1
title: Ponderosa pine sapwood capacitance by sapwood depth, Manitou Experimental Forest, CO for 2024 growing season.

description: The main research goal of the project was to measure sapwood capacitance with sapwood depth in Ponderosa Pine trees and then link any differences in sapwood capacitance with depth to variation in sapflow velocity across the depth profile of trees. See metadata document for additional details.
DOI: 10.6084/m9.figshare.13292531.v2
title: Abricate NCBI output (Table S11)

description: Abricate NCBI output
DOI: 10.6084/m9.figshare.14778552.v1
title: Appendix 1. Socio-demographic profile of study participants

description: Socio-demographic profile of study participants
DOI: 10.6084/m9.figshare.19930760.v1
title: PeSTK db: A comprehensive data repository of Probiotic Serine, Threonine kinases

description: <strong>The signal transduction pathway of prokaryotes involves a peptidoglycan synthesis cluster (PG) to sense external stimuli. One of the major components of the PG synthesis cluster is protein kinases (pknA - G). The sequence data of probiotic eSTKs (Eukaryotic like Serine, Threonine kinases) are obscure, scarce and essentially required to understand the role of probiotic microbes in combating infectious diseases. The most essential need to understand and develop certain therapeutic drugs against pathogens is the eSTK sequence data. Hence, we developed a comprehensive user-friendly data repository of probiotic eSTK’s (PeSTK), which holds 830 STK sequences. Therefore, the data resource of PeSTK developed is unique, an open-access very summative containing various probiotic eSTK’s in a single locality. The sequence datasets of the eSTK developed with easy-to-operate browsing as well as searching. Therefore, eSTK data resources should be useful for sequence-based studies and drug development. </strong>
DOI: 10.6084/m9.figshare.3554922.v1
title: Appendix C. Details on the imputation analyses used in this manuscript.

description: Details on the imputation analyses used in this manuscript.
DOI: 10.6084/m9.figshare.c.3789814_d9.v1
title: Monthly GPP at 0.05 degree

description: unit in g C m-2 month-1
DOI: 10.6084/m9.figshare.21724154.v1
title: Supplementary Material for: What Kind of Patients Receive Inpatient and Day-Hospital Treatment in Departments of Psychosomatic Medicine and Psychotherapy in Germany?

description: <b><i>Introduction:</i></b> Germany is one of the few countries with a medical specialty of psychosomatic medicine and psychotherapy and many treatment resources of this kind. <b><i>Objective:</i></b> This observational study describes the psychosomatic treatment programs as well as a large sample of day-hospital and inpatients in great detail using structured diagnostic interviews. <b><i>Methods:</i></b> Mental disorders were diagnosed according to ICD-10 and DSM-IV by means of Mini-DIPS and SCID-II. In addition to the case records, a modified version of the CSSRI was employed to collect demographic data and service use. The PHQ-D was used to assess depression, anxiety, and somatization. <b><i>Results:</i></b> 2,094 patients from 19 departments participated in the study after giving informed consent. The sample consisted of a high proportion of “complex patients” with high comorbidity of mental and somatic diseases, severe psychopathology, and considerable social and occupational dysfunction including more than 50 days of sick leave per year in half of the sample. The most frequent diagnoses were depression, somatoform and anxiety disorders, eating disorders, personality disorders, and somato-psychic conditions. <b><i>Conclusions:</i></b> Inpatient and day-hospital treatment in German university departments of psychosomatic medicine and psychotherapy is an intensive multimodal treatment for complex patients with high comorbidity and social as well as occupational dysfunction.
DOI: 10.6084/m9.figshare.5765502.v1
title: Survey and Typology of Blockchain Applications (Sep 2017)

description: This is a dataset of emerging blockchain applications surveyed in September 2017, used as the basis for the paper 'Making Sense of Blockchain Applications: A Typology for HCI' which will be published at CHI 2018.
DOI: 10.6084/m9.figshare.27640305.v1
title: Social Media Addiction and Mindfulness in Latinx College Students

description: These data support a study of the relationships between social media addiction, core beliefs, and mindfulness in Latinx college students.
DOI: 10.6084/m9.figshare.25688628.v1
title: DNA damage repair factor Rad18 controls virulence partially via transcriptional suppression of genes <i>HWP1</i> and <i>ECE1</i> in <i>Candida albicans</i>

description: DNA damage repair is a crucial cellular mechanism for rectifying DNA lesions arising during growth and development, making it essential for pathogens to combat the reactive oxygen species (ROS) stress generated by host cells. Among the various repair pathways, postreplication repair (PRR) plays a pivotal role in resolving single-stranded gaps induced by DNA damage. However, the contribution of PRR to virulence remain elusive in the fungal pathogen <i>Candida albicans</i><i> </i><i>(C. albicans)</i>. In this study, we investigated the role of Rad18, a critical component of PRR, in DNA damage response and virulence in <i>C. albicans</i>. We observed that deletion of <i>RAD18</i> in <i>C. albicans</i> resulted in heightened sensitivity to DNA damage stress. Through deletion of specific internal domains coupled with spot assay analysis, our findings revealed that the internal RING and SAP domains played essential roles in DNA damage response, whereas the ZNF domain exhibited relatively less importance. Using the <i>Galleria mellonella</i> model, loss of Rad18 led to increased virulence. RNA-seq analysis revealed that loss of Rad18 upregulated the transcription of genes encoding transporters and oxidoreductases, as well as virulence genes, including <i>HWP1</i> and <i>ECE1</i>. Suppression of the transcription of these virulence genes in the <i>RAD18</i>-deletion strain by a dCas9-mediated CRISPRi system reversed its increased virulence. Taken together, these data demonstrate that Rad18 plays a significant role in virulence partially through transcriptional suppression of virulence genes <i>HWP1</i> and <i>ECE1</i> in <i>C. albicans</i>. Our findings provide valuable insights into the intricate relationship between DNA damage response and virulence in <i>C. albicans</i>.
DOI: 10.6084/m9.figshare.5324872.v2
title: Supplementary Material for: Practical Value of Anti-Xa Activity in the Evaluation of Extracorporeal Circuit Anticoagulation during Haemodialysis: Results of a Cross-Sectional Single-Centre Study

description: <b><i>Background/Aims:</i></b> Anticoagulation of the extracorporeal circuit is essential for adequate haemodialysis (HD). Low molecular weight heparins (LMWHs) are safe and sufficient towards achieving this goal. In the Netherlands, dosage is based on bodyweight and adjusted based on clinical events. LMWH levels during dialysis can be quantified through measurement of the anti-Xa activity and a target range of 0.5-1.0 IU/mL has been proposed. We aimed to evaluate the practical value of the anti-Xa activity to guide LMWH dosage in HD patients. Additionally, the value of the activated partial thromboplastin time (APTT) was investigated. <b><i>Methods:</i></b> All prevalent adult HD patients of our dialysis clinic were included. APTT and anti-Xa activity were measured before, during and after 2 dialysis sessions. Clinical and dialysis characteristics, including LMWH dosage, were derived from digital patient charts. <b><i>Results:</i></b> Our final study cohort consisted of 83 patients. LMWH dosage during dialysis was appropriate for bodyweight in 61% of cases, of which 50% reached an anti-Xa activity within the putative target range of 0.5-1.0 IU/mL. Forty-six percent of patients had an anti-Xa activity &gt;1.0 IU/mL. Anti-Xa levels during and after dialysis were significantly correlated (<i>r</i> = 0.803, <i>p</i> &lt; 0.01). No thrombotic or haemorrhagic complications were observed in this study. Correlation of APTT with anti-Xa activity was poor. <b><i>Conclusion:</i></b> Anti-Xa activity measurements during dialysis can identify patients in whom LMWH dosage should be lowered in a subsequent dialysis session. Whether such an intervention leads to a decrease in haemorrhagic complications needs to be evaluated in prospective studies.
DOI: 10.6084/m9.figshare.9782351.v1
title: Actin filaments in mouse hippocampal neurons

description: pSIM image of actin filaments in mouse hippocampal neurons<br>Raw microscope image from conventional microscope GE DeltaVision OMX SR, SIM reconstruction result via the associated software SoftWoRx and the corresponding pSIM images.<br>Metadata file of the raw images are accompanied.<br>Pixel size: 80nm in raw data and 40 nm in high-resolution reconstructed data<br>Gamma is set to 0.5 for the visualization due to the unequal level of the intensity between the axon and dendrite
DOI: 10.6084/m9.figshare.27367467.v1
title: RAW data of EEG

description: This data set includes the RAW EEG dataset obtained from 20 healthy young adults during attentional shift tasks.
DOI: 10.6084/m9.figshare.28739987.v1
title: Supplementary Material for: Superior mesenteric artery during intestinal loop formation and its positional changes from the extracoelom to the abdominal cavity

description: Introduction: Features of the superior mesenteric artery (SMA) and its intestinal branches during the embryonic and early fetal periods have not been fully described. We aimed to comprehensively elucidate the characteristics of intestinal branch artery formation in the SMA. 
Methods: Serial tissue sections of seven early fetal specimens belonging to the Blechschmidt Collection were digitalized and used for segmentation and reconstruction of the intestinal loop, SMA trunk, intestinal branch arteries, and mesentery for further analysis. 
Results: The intestinal branch arteries fed the intestinal tract from the oral side to the anal side, according to the order of their origin from the root to the periphery of the SMA trunk. SMA and intestinal branches were not as strongly conserved in their morphology as indicated in previous research but varied between specimens. Most intestinal branch arteries exhibited frequent branching with small intervals at the periphery, whereas the proximal branch exhibited few branches. Only a few peripheral branches made contact with the neighboring intestinal branch arteries. The fetal intestinal branch artery architecture differed greatly from that of adults. There were considerable inter- and intra-specimen variations in the intestinal tract length per feeding intestinal branch artery. The SMA branching arteries did not always supply each tertiary loop individually, and not every loop is connected to one artery.
Conclusion: This study elucidates the characteristics of forming the SMA intestinal branch arteries. Specifically, the findings suggest that the SMA is similar to other arteries in that its branches show a level of variability in feeding tissues.
DOI: 10.6084/m9.figshare.28839686.v1
title: Supplementary-Dataset

description: This is the supplementary dataset of the fluconazole popPK in the ICU study, where we aimed to identify factors impacting fluconazole pharmacokinetic–pharmacodynamic (PKPD) target attainment and provide a dosing regimen ensuring adequate target attainment in critically ill patients.
DOI: 10.17632/f5y9cggnxy
title: k-mers 1D and 2D representation dataset of SARS-CoV-2 nucleotide sequences

description: The dataset provides five types of k-mers genome representation characterized as k-mers count 1D, k-mers probability 1D, k-mers count 2D, k-mers probability 2D, and k-mers image. The dataset is composed of 1557 virus instances of SARS-CoV-2. Besides, the dataset also provides a data stream of 11540 viruses from the Virus-Host DB dataset and the other three Riboviria viruses from NCBI (Betacoronavirus RaTG13, bat-SL-CoVZC45, and bat-SL-CoVZXC21).
DOI: 10.6084/m9.figshare.26124634.v1
title: Dataset - Andersen, Livingston, Robertson, MacMillan - Glial voltage-gated K<sup>+</sup> channels modulate the neural abiotic stress tolerance of <i>Drosophila melanogaster</i>

description: This data file contains all data used for production of the figures presented in the paper"Glial voltage-gated K<sup>+</sup> channels modulate the neural abiotic stress tolerance of <i>Drosophila melanogaster</i>"<br><br>by Mads Kuhlmann Andersen<sup>1,3</sup>*, Dawson B. H. Livingston<sup>1,4</sup> R. Meldrum Robertson<sup>2</sup> and Heath A. MacMillan<sup>1</sup><br><sup><em>1</em></sup><i>Department of Biology, Carleton University, Ottawa, ON, Canada</i><br><sup><em>2</em></sup><i>Department of Biology, Queen’s University, Kingston, ON, Canada</i><sup><em>3</em></sup><i>Current address: Department of Biology, Aarhus University, Aarhus, Denmark</i><br><sup><em>4</em></sup><i>Current address: </i><i>Department of Biochemistry, Microbiology and Immunology, University of Ottawa, Ottawa, ON, Canada</i>
DOI: 10.6084/m9.figshare.28739051.v1
title: My data.zip

description: My data.
DOI: 10.6084/m9.figshare.1424617.v1
title: Phase equilibria, binary ammonia - water system at 1 bar

description: Compilation of literature data on solid-liquid equilibria in the ammonia - water binary system at 1 bar. Includes tabulated data, fitted liquidus and solidus lines and a range of graphical plots.
DOI: 10.6084/m9.figshare.17207231.v1
title: Sleep during travel balances individual sleep needs

description: Aggregated and anonymized data supporting the findings in "<i>Sleep during travel balances individual sleep needs</i>" (Jónasdóttir <i>et al.</i>). <br>Raw data are not publicly available to preserve individuals’ privacy (according to the Privacy Policy for the wearable devices). Interested researchers may contact the corresponding authors regarding full data access.
DOI: 10.6084/m9.figshare.7336394.v1
title: Occurrence of Dioctophyme renale larvae (Goeze, 1782) (Nematoda: Enoplida) in a new host from southern Brazil

description: Abstract Dioctophymatosis is caused by the giant kidney worm Dioctophyme renale which occurs in dogs, cats, and wild mammals. In Brazil, the disease has been diagnosed in dogs from several states around the country. In the present study, the occurrence of D. renale larvae in snakes from southern of Brazil is reported. Three specimens of Philodryas patagoniensis (Serpentes: Dipsadidae) (common names in Brazil: “parelheira”, “papa-pinto”) roadkill in the county of Capão do Leão, State of Rio Grande do Sul, southern Brazil, were necropsied. Two third-stage larvae of D. renale were found in the coelomic cavity of P. patagoniensis. This study reveals a new host for D. renale larvae in the southern region of the State of Rio Grande do Sul, Brazil. This particular geographic area of the country has stood out as several cases of D. renale infection have been reported in a number of vertebrates from this region including domestic dogs and cats and wild animals such as carnivores, fish, and freshwater turtles.
DOI: 10.6084/m9.figshare.26425087.v1
title: Socio-Economic Impact of the 2019 Cod Fishing Ban on Polish Fishermen in the Baltic Sea: Dataset

description: Socio-Economic Impact of the 2019 Cod Fishing Ban on Polish Fishermen in the Baltic Sea: DatasetInterview TranscriptsSurvey Data InformationPhotographic Survey<br>
DOI: 10.6084/m9.figshare.7945610.v1
title: gVCF_NA20807

description: 1000 Genomes gVCF mapped to hs37d5 for NA20807. Complete collection: https://doi.org/10.6084/m9.figshare.c.4414307
DOI: 10.6084/m9.figshare.25040075.v1
title: Hydraulic fractures and hydrate production

description: These are the archived data for the manuscript "Efficacy of hydraulic fractures in improving gas production from low-permeability gas hydrate deposits: Insights from numerical simulations"<i>.</i>