cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.7284/109760
title: Multiplexed data collected during research cruise PS1201 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109761
title: Multiplexed data collected during research cruise PS1202 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345880.v1
title: Microarray_data.rar

description: The file contains 10 cancer microarray data sets in MAT files. For each data set, the number of rows represents the number of samples, and the first column is the class vector. Please see S. Nakariyakul, "A hybrid gene selection algorithm based on interaction information for microarray-based cancer classification," 2018 for more information.
DOI: 10.7284/109763
title: Multiplexed data collected during research cruise PS1206 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109867
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1206 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109764
title: Multiplexed data collected during research cruise PS1207 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109868
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1207 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109765
title: Multiplexed data collected during research cruise PS1208 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/109869
title: Multiplexed data collected during research cruise PS1208 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/109766
title: Multiplexed data collected during research cruise PS1208A using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/109870
title: Multiplexed data collected during research cruise PS1208A using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.6084/m9.figshare.7345799
title: Additional file 1: of Cool, alkaline serpentinite formation fluid regime with scarce microbial habitability and possible abiotic synthesis beneath the South Chamorro Seamount

description: Table S1. Results of chemical analyses of the CORK fluid (XLSX 49Â kb)
DOI: 10.6084/m9.figshare.7345796
title: Additional File 8:

description: Table S3. Detailed information of the conserved GWAS sites over the two years (2014 and 2015). QTL_1 to QTL_29: conserved QTLs for the same trait(s) over the two years; QTL_30 to QTL_50: conserved QTL regions but for different traits between the two years; FP: full panel; SBN: secondary branch number; PBN: primary branch number; SpN: spikelet number; SBintL: secondary branch internode length; PBintL: primary branch internode length; PBL: primary branch length; SBL: secondary branch length; RL: Rachis length; PH: plant height; TN: tiller number; eTN: efficient tiller number. Locus-id: locus identification number in MSU7.0 (for coding genes) and mirBase v21 (for miRNAs); (*) Functionally characterized candidate genes in rice from OGRO and funRiceGenes databases ( qtaro.abr.affrc.go.jp /ogro; funricegenes.ncpgr.cn ). Genomic coordinates in red indicate genes that are located at a distance below 50Â kb from the LD block of the corresponding QTL. (XLS 108 kb)
DOI: 10.6084/m9.figshare.7345799.v1
title: Additional file 1: of Cool, alkaline serpentinite formation fluid regime with scarce microbial habitability and possible abiotic synthesis beneath the South Chamorro Seamount

description: Table S1. Results of chemical analyses of the CORK fluid (XLSX 49Â kb)
DOI: 10.7284/109872
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1209A using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345796.v1
title: Additional File 8:

description: Table S3. Detailed information of the conserved GWAS sites over the two years (2014 and 2015). QTL_1 to QTL_29: conserved QTLs for the same trait(s) over the two years; QTL_30 to QTL_50: conserved QTL regions but for different traits between the two years; FP: full panel; SBN: secondary branch number; PBN: primary branch number; SpN: spikelet number; SBintL: secondary branch internode length; PBintL: primary branch internode length; PBL: primary branch length; SBL: secondary branch length; RL: Rachis length; PH: plant height; TN: tiller number; eTN: efficient tiller number. Locus-id: locus identification number in MSU7.0 (for coding genes) and mirBase v21 (for miRNAs); (*) Functionally characterized candidate genes in rice from OGRO and funRiceGenes databases ( qtaro.abr.affrc.go.jp /ogro; funricegenes.ncpgr.cn ). Genomic coordinates in red indicate genes that are located at a distance below 50Â kb from the LD block of the corresponding QTL. (XLS 108 kb)
DOI: 10.7284/109772
title: Multiplexed data collected during research cruise PS1216 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109873
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1216 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345784
title: Additional File 6:

description: Table S2. List of the significant markers from GWAS in 2014 and 2015 in the full panel, the indica and the japonica subpanels. The position (POS, in bp) in the chromosome (CHR) of each marker (based on MSU7.0 O. sativa Nipponbare reference genome) is indicated. The p-values associated to the traits are indicated. The values in bold are below 1. 10â â 4. Primary branch number (PBN), secondary branch number (SBN), spikelet number (SpN), primary branch length (PBL), primary internode length (PBintL), secondary branch length (SBL), secondary internode length (SBintL), tertiary branch number (TBN) and rachis length (RL). (XLS 151 kb)
DOI: 10.6084/m9.figshare.7345784.v1
title: Additional File 6:

description: Table S2. List of the significant markers from GWAS in 2014 and 2015 in the full panel, the indica and the japonica subpanels. The position (POS, in bp) in the chromosome (CHR) of each marker (based on MSU7.0 O. sativa Nipponbare reference genome) is indicated. The p-values associated to the traits are indicated. The values in bold are below 1. 10â â 4. Primary branch number (PBN), secondary branch number (SBN), spikelet number (SpN), primary branch length (PBL), primary internode length (PBintL), secondary branch length (SBL), secondary internode length (SBintL), tertiary branch number (TBN) and rachis length (RL). (XLS 151 kb)
DOI: 10.7284/109771
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1216 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109874
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1216A using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109776
title: Multiplexed data collected during research cruise PS1217 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/109875
title: Multiplexed data collected during research cruise PS1217 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/109779
title: Multiplexed data collected during research cruise PS1218 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109876
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1218 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109778
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1218 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109782
title: Multiplexed data collected during research cruise PS1219 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109877
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1219 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109781
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1219 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109786
title: Multiplexed data collected during research cruise PS1220 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/109878
title: Multiplexed data collected during research cruise PS1220 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/109788
title: Multiplexed data collected during research cruise PS1221 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345715
title: Additional File 1:

description: Table S1. Phenotypic and passport data of the 159 accessions of the Vietnamese rice landrace collection in 2014 and 2015. The indicated phenotypic data correspond to the average values for each trait per accession per year. Values relating to length are in cm. (XLS 157 kb)
DOI: 10.7284/109879
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1221 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109880
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1226 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109881
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1227 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345694
title: Additional file 2: of Bayesian adaptive algorithms for locating HIV mobile testing services

description: Figure S1. Example of grid of true underlying prevalences of undiagnosed HIV infection. Figure S2. Estimated prevalence of undiagnosed HIV infection by strategy at five time points. Figure S3. Cumulative visits to each zone by strategy at five time points. Figure S4 Example of grid of true underlying prevalences of undiagnosed HIV infection. Figure S5. Estimated prevalence of undiagnosed HIV infection by strategy at five time points. Figure S6. Cumulative visits to each zone by strategy at five time points. (ZIP 3464 kb)
DOI: 10.7284/109790
title: CTD (Conductivity, Temperature, Depth) data collected during research cruise PS1227 using a Sea-Bird SBE-911+ instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345694.v1
title: Additional file 2: of Bayesian adaptive algorithms for locating HIV mobile testing services

description: Figure S1. Example of grid of true underlying prevalences of undiagnosed HIV infection. Figure S2. Estimated prevalence of undiagnosed HIV infection by strategy at five time points. Figure S3. Cumulative visits to each zone by strategy at five time points. Figure S4 Example of grid of true underlying prevalences of undiagnosed HIV infection. Figure S5. Estimated prevalence of undiagnosed HIV infection by strategy at five time points. Figure S6. Cumulative visits to each zone by strategy at five time points. (ZIP 3464 kb)
DOI: 10.7284/109791
title: Multiplexed data collected during research cruise PS1228 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109882
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1228 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/109794
title: Multiplexed data collected during research cruise PS1229 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/113279
title: Multiplexed data collected during research cruise PS1301 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113178
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1301 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113280
title: Multiplexed data collected during research cruise PS1302 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/113281
title: Multiplexed data collected during research cruise PS1303 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113180
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1303 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345631
title: Additional file 6: of Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance

description: Interactive figure for comparison of performance metrics. (A) Absolute precision and recall for each workflow. (B) Relative ranks of precision and recall for each workflow. Grey dots show performance for all workflows for the selected read depth(s) and sample number(s); red dots highlight the selected workflow(s). (XLSX 536 kb)
DOI: 10.6084/m9.figshare.7345631.v1
title: Additional file 6: of Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance

description: Interactive figure for comparison of performance metrics. (A) Absolute precision and recall for each workflow. (B) Relative ranks of precision and recall for each workflow. Grey dots show performance for all workflows for the selected read depth(s) and sample number(s); red dots highlight the selected workflow(s). (XLSX 536 kb)
DOI: 10.7284/113282
title: Multiplexed data collected during research cruise PS1304 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113181
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1304 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113283
title: Multiplexed data collected during research cruise PS1304NB using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/113182
title: Multiplexed data collected during research cruise PS1304NB using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/113183
title: Multiplexed data collected during research cruise PS1305 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.6084/m9.figshare.7345601
title: Additional file 4: of Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance

description: Literature survey citations and average sample number. 200 studies containing RNA-Seq differential expression analysis, either from all species or limited to primary human samples. Average sample number from these studies is also displayed in Fig. 4. (XLSX 52 kb)
DOI: 10.7284/113184
title: Multiplexed data collected during research cruise PS1305 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.6084/m9.figshare.7345601.v1
title: Additional file 4: of Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance

description: Literature survey citations and average sample number. 200 studies containing RNA-Seq differential expression analysis, either from all species or limited to primary human samples. Average sample number from these studies is also displayed in Fig. 4. (XLSX 52 kb)
DOI: 10.7284/113187
title: Multiplexed data collected during research cruise PS1306 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.6084/m9.figshare.7345589
title: Additional file 3: of Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance

description: Table of software tools, with versions and runtime parameters. (XLSX 15 kb)
DOI: 10.6084/m9.figshare.7345589.v1
title: Additional file 3: of Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance

description: Table of software tools, with versions and runtime parameters. (XLSX 15 kb)
DOI: 10.7284/113188
title: Multiplexed data collected during research cruise PS1306B using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.6084/m9.figshare.7345577
title: Additional file 2: of Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance

description: Sample combinations for each iteration at varying sample numbers. The same sample combinations were run at all read depths and for all workflows. (XLSX 21 kb)
DOI: 10.7284/113189
title: Multiplexed data collected during research cruise PS1306B using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.6084/m9.figshare.7345577.v1
title: Additional file 2: of Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance

description: Sample combinations for each iteration at varying sample numbers. The same sample combinations were run at all read depths and for all workflows. (XLSX 21 kb)
DOI: 10.7284/113192
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1307 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113193
title: Multiplexed data collected during research cruise PS1308 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.6084/m9.figshare.7345562
title: Additional file 1: of Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance

description: Original read depth of individual samples. (XLSX 12 kb)
DOI: 10.7284/113194
title: Multiplexed data collected during research cruise PS1308 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.6084/m9.figshare.7345562.v1
title: Additional file 1: of Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance

description: Original read depth of individual samples. (XLSX 12 kb)
DOI: 10.7284/113284
title: Multiplexed data collected during research cruise PS1309 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/113195
title: Multiplexed data collected during research cruise PS1309 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.6084/m9.figshare.7345547
title: Additional file 3 of funcExplorer: a tool for fast data-driven functional characterisation of high-throughput expression data

description: List of significantly enriched GO functions for the cluster shown in Fig.Â 7. (XLSX 17 kb)
DOI: 10.6084/m9.figshare.7345547.v2
title: Additional file 3 of funcExplorer: a tool for fast data-driven functional characterisation of high-throughput expression data

description: List of significantly enriched GO functions for the cluster shown in Fig.Â 7. (XLSX 17 kb)
DOI: 10.7284/113285
title: Multiplexed data collected during research cruise PS1310 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.6084/m9.figshare.7345547.v1
title: Additional file 3 of funcExplorer: a tool for fast data-driven functional characterisation of high-throughput expression data

description: List of significantly enriched GO functions for the cluster shown in Fig.Â 7. (XLSX 17 kb)
DOI: 10.7284/113196
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1310 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113286
title: Multiplexed data collected during research cruise PS1311 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/113197
title: Multiplexed data collected during research cruise PS1311 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/113287
title: Multiplexed data collected during research cruise PS1312 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113198
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1312 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113288
title: Multiplexed data collected during research cruise PS1313 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113199
title: ADCP (Acoustic Doppler Current Profiler) data collected during research cruise PS1313 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition
DOI: 10.7284/113289
title: Multiplexed data collected during research cruise PS1314 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/113200
title: Multiplexed data collected during research cruise PS1314 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/113290
title: Multiplexed data collected during research cruise PS1315 using a MLML UDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/113201
title: Multiplexed data collected during research cruise PS1315 using a Hawaii UHDAS instrument system onboard the platform RV Point Sur
DOI: 10.7284/113291
title: Multiplexed data collected during research cruise PS1316 using a MLML UDAS instrument system onboard the platform RV Point Sur

description: Original (unprocessed) data collected during a Field_expedition