cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.5281/zenodo.5566843
title: Data from the thesis diagnosis of waste, application possibilities and future demand for green coconut shells, with evaluation of information uncertainty

description: Information on the quantities of green coconut shells produced in coastal regions is not well known, which can make it difficult to manage these frequently wasted materials, as well as the understanding that they can be included in a production process as a raw material, with various possibilities of use and income generation. Given this situation, the objective of this research is to develop a diagnosis of the potential use of green coconut shells, after water consumption, in public places in municipalities in the southern and southern coast of Bahia. It is also intended to identify the future demand of the potential possibility for the recovery of the bark, and provide subsidies that can be used to organize the use of this material. In this context, the method applied in this research consists of five steps: (i) literature review; (ii) diagnosis of bark situation in the study region; (iii) evaluation of the uncertainty of the estimated amount of shells; (iv) possibilities for applying green coconut shells and preparing the analysis of strengths, weaknesses, opportunities and threats (SWOT); and (v) obtaining future demand for the potential output for the region through quantitative techniques for predicting time series with uncertainty assessment. The main scientific contributions of this work consist, therefore, (a) in the diagnosis of the waste of green coconut shells in the region; (b) the possibilities of application of coconut shells; (c) in the demand forecasting method elaborated for time series without trends and with high variability; and (d) in assessing the uncertainty of the quantitative information obtained. Thus, the study developed can be used as a subsidy, either for replicating the research process in other types of waste allocated in any region, or for the adoption of public policies to manage these materials, or even for the encouragement and creation of an appropriate productive scenario for the management of green coconut shells in the study region, which contributes to the understanding of the potential for generating environmental, economic and social value from the use and processing of these wasted materials.
description: {"references": ["NUNES, L. A.; SILVA, M. L. S.; GERBER, J. Z.; KALID, R. A. Waste green coconut shells: Diagnosis of the disposal and applications for use in other products. Journal of Cleaner Production, v. 255, p. 120-169, 2020. https://doi.org/10.1016/j.jclepro.2020.120169", "NUNES, L. A. Diagnosis of waste, application possibilities and future demand for green coconut shells, with assessment of information uncertainty. Doctoral Thesis. Industrial Engineering Program, Federal University of Bahia, 2021."]}
DOI: 10.6073/pasta/e0dfb8220980bad60d1edb24ebd9d055
title: New England Enhanced Forest Inventory

description: Light detection and ranging (LiDAR) has become a common tool for generating remotely sensed forest inventories. However, regional modeling of forest attributes using LiDAR has remained challenging due to varying parameters between LiDAR datasets, such as pulse density. Here we develop a regional model using a three dimensional convolutional neural network (CNN). We then apply our model to publicly available data over New England, generating maps of fourteen forest attributes at a 10 m resolution over 85 % of the region. Attributes include aboveground biomass (kg), total biomass (kg), tree count (#), percent conifer (%), basal area (m^2), mean height (m), quadratic mean diameter (cm), percent spruce/fir (%), percent white pine (%), inner bark volume (m^3), merchantable volume (m^3), and spruce/fir volume (m^3. All values correspond to the amount per pixel cell (I.E. kg of biomass found within that pixel). Map/model performance was assessed using the USFS’s FIA inventory, which constituted an independent dataset free from spatial autocorrelation. More data can be found in the following pre-print: Ayrey, E., Hayes, D. J., Kilbride, J. B., Fraver, S., Kershaw, J. A., Cook, B. D., & Weiskittel, A. R. (2019). Synthesizing Disparate LiDAR and Satellite Datasets through Deep Learning to Generate Wall-to-Wall Regional Forest Inventories. bioRxiv, 580514.
DOI: 10.6084/m9.figshare.14406729.v1
title: Honey bee pathogens and parasites in Swedish apiaries: a baseline study

description: This nation-wide survey including 382 Swedish apiaries is the first to document base-line information of the prevalence and distribution of the ectoparasitic mite <i>Varroa destructor</i>, the mite-associated viruses <i>Deformed wing virus</i> and <i>Acute bee paralysis virus,</i> and the bacterial honey bee pathogens <i>Paenibacillus larvae</i> and <i>Melissococcus plutonius</i> in the country. Varroa and associated viruses were not detected in the northern regions of the country. The bacterium <i>P. larvae</i> was detected in 6% of the investigated apiaries and it was absent in more than half of the counties, <i>M. plutonius</i> was detected in two apiaries in one county. Other results from our study include questionnaire responses, in which beekeepers reported total winter colony losses of 6.4%. Fifty-three percent of the beekeepers reported to have purchased queens the year preceding this study, and 40.1% moved colonies to the apiary. Queens were imported from European countries and the USA. The movements of bees were one of the factors strongly associated with the prevalence of the disease-causing organisms surveyed and colony losses. The majority of the participating beekeepers were not aware of any disease related signs in their apiaries despite positive laboratory findings. This highlights the importance of further outreach efforts to increase the beekeepers' awareness of diseases and disease management. The results provide a disease baseline for improvements of the surveillance system.
DOI: 10.3886/e145681v1-98740
title: When the Kids Are Not Alright: School Counseling in the Time of COVID-19

description: The unprecedented arrival of COVID-19 upended the lives of American children with rapid shifts to remote and hybrid schooling and reduced access to school-based support. Growing concerns about threats to students’ mental health and decreased numbers of students transitioning to postsecondary education suggest access to school counselors is needed more than ever.Although previous research on school counselors finds they promote positive postsecondary, social emotional, and academic outcomes for students, further studies highlight the organizational constraints, such as an overemphasis on administrative duties and unclear role expectations, that hinder their work. Drawing on survey and focus group data, our mixed methods study documents school counselors’ experiences during the COVID-19 crisis, including the opportunities and constraints facing their practice. Findings suggest there should be a concerted effort to reduce role ambiguity and conflict in counselors’ roles, so they are better able to meet students’ increased needs.
description: Two-pronged sampling approach to draw a nation-wide sample that allowed for intentional recruitment of urban and rural counselors.<br>We distributed the survey in May and June of 2020 via national and stateprofessional organizations’ listservs and social media outlets.We also purchased contact details for counselors through MDR Education (n = 3,000) and sent those individuals a survey link directly. We oversampled rural andurban counselors specifically.
description: other; web-based survey;
DOI: 10.5281/zenodo.5566809
title: Multi-parameter photon-byphoton hidden Markov modeling dataset

description: The core jupyter notebooks demonstrating mpH<sup>2</sup>MM using real nsALEX data on DNA hairpin, the maltose binding protein MalE, and the type III secretion system effector YopO. Also included are the jupyter notebooks for generating simulated photon trajectories to test the validity of the Integrated complete likelihood (ICL) and mpH<sup>2</sup>MM on data where the ground truth is known. Included are all HDF5 files used by the jupyter notebooks. Those for MalE and YopO are contained in zip files, and should be unziped maintaining the directory structure. All other HDF5 files should be kept in the same folder as the jupyter notebooks. Additional figures and csv files of H2MM models are included in separate zip file.
DOI: 10.25721/20ve-fr19
title: Polka
DOI: 10.6084/m9.figshare.15102027
title: Social Agent Identity Cells in the Prefrontal Cortex of Interacting Groups of Primates

description: Matlab file for generating main figures.
DOI: 10.6084/m9.figshare.15102027.v1
title: Social Agent Identity Cells in the Prefrontal Cortex of Interacting Groups of Primates

description: Matlab file for generating main figures.
DOI: 10.5281/zenodo.5566873
title: Geoglossaceae genomes

description: .
DOI: 10.5281/zenodo.5566872
title: Geoglossaceae genomes

description: .
DOI: 10.6084/m9.figshare.16803229
title: Disentangling climatic and nest predator impact on reproductive output reveals adverse high temperature effects regardless of helper number in an arid-region cooperative bird

description: Datasets and scripts for the article:Disentangling climatic and nest predator impact on reproductive output reveals adverse high temperature effects regardless of helper number in an arid-region cooperative bird.<br>by:D’Amelio B. Pietro1,2, Ferreira C. André2,3, Fortuna Rita3, Paquet Matthieu4, Silva R. Liliana3, Franck Theron2,3, Doutrelant Claire1,2, Covas Rita1,3 1 FitzPatrick Institute of African Ornithology, DSI-NRF Centre of Excellence, University of Cape Town, Rondebosch 7701, South Africa2 Centre d’Ecologie Fonctionnelle et Evolutive, CNRS, Univ. Montpellier, EPHE, IRD, Montpellier, France3 CIBIO-InBio, Research Centre in Biodiversity and Genetic Resources, Campus Agrário de Vairão, Vairão, Portugal4 Department of Ecology, Swedish University of Agricultural Sciences, Box 7044, SE-75007 Uppsala, Sweden<br><br>Precise description is in the readme file<br>
DOI: 10.6084/m9.figshare.16803229.v2
title: Disentangling climatic and nest predator impact on reproductive output reveals adverse high temperature effects regardless of helper number in an arid-region cooperative bird

description: Datasets and scripts for the article:Disentangling climatic and nest predator impact on reproductive output reveals adverse high temperature effects regardless of helper number in an arid-region cooperative bird.<br>by:D’Amelio B. Pietro1,2, Ferreira C. André2,3, Fortuna Rita3, Paquet Matthieu4, Silva R. Liliana3, Franck Theron2,3, Doutrelant Claire1,2, Covas Rita1,3 1 FitzPatrick Institute of African Ornithology, DSI-NRF Centre of Excellence, University of Cape Town, Rondebosch 7701, South Africa2 Centre d’Ecologie Fonctionnelle et Evolutive, CNRS, Univ. Montpellier, EPHE, IRD, Montpellier, France3 CIBIO-InBio, Research Centre in Biodiversity and Genetic Resources, Campus Agrário de Vairão, Vairão, Portugal4 Department of Ecology, Swedish University of Agricultural Sciences, Box 7044, SE-75007 Uppsala, Sweden<br><br>Precise description is in the readme file<br>
DOI: 10.17632/pxtjgshzzc.1
title: Mathematica Code and Data to replicate  "More birds than stones --  A framework for second-best energy and climate policy adjustments" 

description: *******************************
* Model documentation
* 
* "More birds than stones - A framework for second-best energy and climate policy adjustments"
*
* Carolyn Fischer, Michael Huebler &  Oliver Schenker
*
* September 2021
*******************************

This file documents the model used to run the numerical simulations in this paper. The model and its calibration is described in Section 5 of the paper

The model has been programmed in Mathematica. In order to execute the model a running Mathematica environment is necessary.


****************************
FHS_base-first-best.nb

This is the base file that always needs to run first. It calibrates the model and computes the relevant benchmarks -- the no-policy and the first-best policy case.
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The subsequent files are then 2nd-best simulations under incomplete policies.
We recommend to clear memory after each simulation of incomplete policies and start with the base file again. 

****************************
FHS_2ndb_no_ee.nb

* No Energy Efficiency Subsidies
Generates table 3 in the paper and the respective part in table 6 on missing energy efficiency subsidies. It generates also the respective part in table A.4 in the appendix.

****************************
FHS_2ndb_no_rnd.nb

* No R&D Subsidies
Generates Table 4 in the paper and the respective part in Table 6. It generates also the respective part in table A.4 in the appendix.


****************************
FHS_2ndb_no_lbd.nb

* No Output Subsidies for Renewables
Generates Table 5 in the paper and the respective part in Table 6. It generates also the respective part in table A.4 in the appendix.

******************
DOI: 10.17632/tyjd2csyk8.1
title: M.G. Manoj; Rakesh V.; Sreekumar Haridas et al., 2021

description: Swarm Bravo Satellite Data of Ionospheric Irregularities
DOI: 10.17632/dr853shk56.2
title: Facial Expressions Elicit Multiplexed Perceptions of Emotion Categories and Dimensions

description: Behavior results of valence and arousal rating and emotion categorisations
DOI: 10.17632/cjcvw3b4dw.1
title: Urbanization accentuates hand use in the foraging activities of primates

description: Objectives: How a species uses its anatomical manipulators is determined by anatomy and physiology at a proximate level and by phylogeny and ecology at an ultimate level. Primates are often distinguished by their prehensile capabilities and manual dexterity. Theoretical explanations for intraspecific variation in the use of mouth and hands by nonhuman animals is non-existent. In the context of intense pressures of urbanization on natural habitats, we examined if hand and mouth use differed across the rural-urban gradient in food retrieval and food processing under experimental conditions and under naturalistic conditions in cercopithecids. 
Results: The use of hands in acquisition and processing food increased with urbanization and the converse was true for mouth use under experimental conditions. Even under naturalistic settings, all examined species of urban primates showed a bias in hand use during food acquisition. 
Discussion: Thus, it appears that the adaptive pressures of urbanization, like the manual constraints of extracting packaged food and perhaps the need for visual-haptic exploration of novel objects accentuates hand use in even simple tasks among synanthropic groups of nonhuman primates. Additional research is needed to determine specific factors of urbanization influencing the trend observed and to ascertain similar patterns in other primates occupying forest-urban niches.
Materials and Methods: We observed acquisition and processing of peanuts under standardized conditions across groups of bonnet monkey (Macaca radiata) differing in their dietary dependence on packed food items. Next, we coded acquisition and processing behaviors in bonnet macaques, Japanese monkey and vervet monkey in a similar habitat gradient.  The supplementary materials (Folder: Supplementary information) presents supplemental figures and supplemental table. The data file for each primate species is included in 'Mined Info-R data files'. These data files have been used for analyses in R. The excel file contains all the data used in the study and data description is provided in the text file titled,'Data usage details'.
DOI: 10.17632/bz3dvhf95s.3
title: Rio Grande isolated pools temperature

description: Dought and irrigation diversions result in streamflow intermittency and stranding of an endangered fish in the Rio Grande of New Mexico, USA.  We collected temperatures of isolated pools (by date and time) that formed during streamflow intermittency in the Middle Rio Grande of New Mexico, USA, 2011-2016 (time.temp.corrected.csv) during fish rescue.  We compared these temperatures to stream temperature at an upstream perennial site in Albuquerque, New Mexico, USA, by date and time (alameda_combined_final.csv).  We also collected Rio Grande silvery minnow during streamflow intermittency in 2018 and 2020 to evaluate post-rescue survival in captivity in 2018 and 2020 (rescue_surv_all.csv).  See publication: https://doi.org/10.3390/w12123371
DOI: 10.17632/4sw99h374p.1
title: Robotics in marketing education

description: Dataset for an experiment following robotics competition
DOI: 10.17632/hcdmjrjhft.1
title: Raw images WBs_IL-32 promotes proliferation and oxidative phosphorylation and is expressed in a subgroup of myeloma patients with poor prognosis and an immature 

description: Raw images of western blots
DOI: 10.17632/cwvnbt2m8p.1
title: Influenza A induces lactate formation to inhibit type I IFN in primary human airway epithelium. J. Thyrsted et.al. 2021

description: Large scale metabolomics on supernatants from HPAE-ALI cells infected with either IAV or SARS-CoV-2 for 48 or 96 hours.
DOI: 10.17632/x3jbtstc25.3
title: A dataset of features for robotic limb movement classification through EEG signals

description: Each dataset refers to a specific frequency band: Delta, Theta, Alpha, Beta, and Gamma.
DOI: 10.17632/n37bddwy7k.3
title: The argonaut constructs its shell via physical self-organization and coordinated cell sensorial activity. (A. Checa et al.)_Dataset.

description: The shell of the cephalopod Argonauta consists of two layers of fibers that elongate
perpendicular to the shell surfaces. Fibers have a calcitic core sheathed by extremely
thin organic membranes, which form a polygonal network in cross-section. During
growth, fibers with small cross-sectional areas tend to shrink, whereas those with large
sections tend to widen, i.e. they follow the von Neumann-Mullins law. We hypothesize
that fibers evolve as an emulsion between the fluid precursors of both the mineral and
organic phases. In addition, when polygons reach big cross-sectional areas, they
become subdivided by new membranes. To interpret this partitioning process we infer
that the living cells from the mineralizing tissue are able to ‘locate’ and subdivide
particularly large polygons. To do this, living cells must perform contact recognition and
subsequent secretion at sub-micron scale. Accordingly, the fabrication of the argonaut
shell proceeds by physical self-organization together with direct cellular activity
DOI: 10.17632/sbv27srb8y.1
title: Estimating the generation of waste electrical and electronic equipment in organizations: the case of a Brazilian federal agency (Supplementary Material)

description: The generation of waste electrical and electronic equipment (WEEE) has become a globally serious problem. Its adequate management has great importance for governments and organizations alike. Despite the available literature on models for estimating WEEE generation, such analysis and forecasting are scarce in the context of big organizations. The objective of this research is to estimate WEEE generation in organizations using the Market Supply model applied to a Brazilian federal agency. The agency´s Asset Control System was the data source. These records allow organizations to effectively manage their WEEE, influencing the quality of generation estimate. A statistical analysis was carried to calculate the lifespan of the equipment in the system, observing a reduction in the lifespan of the most modern items. The model allows for estimating WEEE generation for the coming years in organizations, whilst providing lifespan profiles, meaning the probabilistic obsolescence rate of appliances. The results obtained, including the statistical analyses and the used methodology represent a valuable resource to organizations as a means to inform their decision-making process regarding the management of WEEE.
DOI: 10.17632/gt4b4c52nh.1
title: Practicing mindfulness amid the COVID-19 pandemic: Using photovoice to understand healthcare professionals' experiences

description:  A four-week online MBI intervention for HPs was designed and implemented using the Zoom platform. An exploratory qualitative analysis of the HPs’ experiences over the four weeks was conducted using a photovoice methodology. Using interpretative phenomenological analysis (IPA), subthemes were generated. The major themes identified were disengaging the autopilot, stress, acceptance and self-care, with subthemes time pressure, mindless movement, anxiety, helplessness, empowerment, faith, and change in relationship to self and environment.
DOI: 10.17632/ww4nnpm4kj.1
title: Imaging Superficial Cervical Lymph Nodes in the EAE MS Model using CEST MRI, MALDI

description: CEST MRI, flow cytometry, MALDI data of superficial cervical lymph nodes in EAE mice over the course of the model
DOI: 10.6084/m9.figshare.16803235
title: A microRNA cluster controls fat cell differentiation and adipose tissue expansion by regulating SNCG

description: We present here lipidomic data from subcutaneous adipose tissue from 20 miR-KO mice and Wt controls under normal chow (1:1, male/females) (5 animals/experimental condition). Prior to lipid extraction, fat samples were spiked with internal standards and solvent of standards was removed by vacuum centrifugation. Then, samples were homogenized with a Precellys® 24 tissue homogenizer (Bertin Instruments). Homogenates containing a wet weight of 2 mg were extracted according to the protocol described by Bligh and Dyer. The analysis of lipids was performed by direct flow injection analysis (FIA), using either a triple quadrupole mass spectrometer (QQQ; FIA-MS/MS) or a hybrid quadrupole-Orbitrap high-resolution mass spectrometer (FIA-FTMS). Both instruments were equipped with a heated electrospray ionization source. FIA-MS/MS (QQQ) was performed in positive ion mode. The following neutral losses were applied: PE, 141 and PI, 277. PE-based plasmalogens (PE P) were analyzed according to the principles described by Berry and colleagues. Sphingosine-based Cer were analyzed using a fragment ion of <i>m/z</i> 264. Correction for isotopic overlap of lipid species was performed for all lipid classes. TG and DG were recorded in positive ion mode as [M+NH<sub>4</sub>]<sup>+</sup> in <i>m/z</i> range 500–1000 and a target resolution of 140,000 (at <i>m/z</i> 200). PC and SM were analyzed as [M+HCOO]<sup>-</sup> in negative ion mode in <i>m/z</i> range 520–960 at the same resolution setting. Peak assignment was performed with the ALEX software and applied a mass accuracy of less than 3 ppm. Quantification was achieved by multiplication of the spiked-in IS amount with the analyte-to-IS intensity ratio. The following lipid species were applied as internal standards: Cer 18:1;O2/14:0, Cer 18:1;O2/17:0, DG 14:0/14:0/0:0, DG 20:0/20:0/0:0, HexCer 18:1;O2/12:0, HexCer 18:1;O2/17:0, LPC 13:0/0:0, LPC 19:0/0:0, PC 14:0/14:0, PC 22:0/22:0, PE 14:0/14:0, PE 20:0/20:0, PI 17:0/17:0, SM 18:1;O2/12:0, TG 17:0/17:0/17:0, and TG 19:0/19:0/19:0. Extracted data were processed by self-programmed Macros.