cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.6qzzmm
title: Occurrence Download

description: A dataset containing 170695 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Charadriiformes",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 170695 records from 55 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0287954-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t4yt2r
title: Occurrence Download

description: A dataset containing 163 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation, Specimen, Fossil)",
 "Country is one of (Argentina, Chile, Colombia, Peru)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Pudu Gray, 1852",
 "Year 1980-2018"
 ]
}

 The dataset includes 163 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174869-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ssdpkg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "ScientificName is Eichhornia Crassipes",
 "StateProvince is Minas Gerais"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174883-220831081235567/datasets/export for details.
DOI: 10.15468/dl.rj468z
title: Occurrence Download

description: A dataset containing 110 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Human Observation)",
 "Country is one of (Indonesia, Bangladesh, Nepal, India, Thailand, Russian Federation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Panthera tigris (Linnaeus, 1758)",
 "Year 1981-2010"
 ]
}

 The dataset includes 110 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0174888-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j5uuzh
title: Occurrence Download

description: A dataset containing 5814342 species occurrences available in GBIF matching the query:
{
 "HostingOrganizationKey" : [
 "is c4f66525-4d36-4c18-82ac-98e088f54db4"
 ]
}

 The dataset includes 5814342 records from 1104 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0287982-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.18150/qyijg7
title: Data for publication: "Decolonization processes in Ukrainian YouTube in user-generated content during Russo-Ukrainian war"

description: These data concern the article "Decolonization processes in Ukrainian YouTube in user-generated content during Russo-Ukrainian war". The article investigates the processes of cultural decolonization within the Ukrainian YouTube sphere, positioning user-generated content as a significant site of resistance against imperial epistemologies and colonial narratives. The study examines chosen Ukrainian YouTube channels, categorized by audience reach and thematic orientation. The analysis identifies decolonial codes, including the exposure of colonial knowledge systems, cultural reappropriation, and the critique of imperial cultural paradigms. The findings illustrate the role of digital media in the contemporary decolonial process in Ukrainian media, highlighting its impact on epistemic sovereignty during the ongoing Russo-Ukrainian war. Methodology of data collection and analysis: manual non-probability sampling of the YouTube channels, quantitative content analysis, and qualitative computer-assisted content analysis. Transcripts were made by Turboscribe and Notta.ai.
DOI: 10.15468/dl.uv8739
title: Occurrence Download

description: A dataset containing 5 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 "BasisOfRecord is one of (Human Observation, Machine Observation, Occurrence evidence, Observation)",
 "TaxonKey is one of (Vanellus vanellus)",
 "Country is one of (American Samoa, Australia, Christmas Island, Cocos (Keeling) Islands, Cook Islands, Fiji, French Polynesia, Guam, Heard Island and McDonald Islands, Kiribati, Marshall Islands, Micronesia (Federated States of), Nauru, New Caledonia, New Zealand, Niue, Norfolk Island, Northern Mariana Islands, Palau, Papua New Guinea, Pitcairn, Samoa, Solomon Islands, Tokelau, Tonga, Tuvalu, United States Minor Outlying Islands, Vanuatu, Wallis and Futuna)"
 ]
}

 The dataset includes 5 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018342-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9zncdt
title: Occurrence Download

description: A dataset containing 68555760 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Capra hircus, Canis lupus, Felis catus, Rattus rattus, Zachrysia provisoria, Acacia nilotica, Mangifera indica, Anthonomus grandis, Cinara cupressi, Diaphorina citri, Bombus ruderatus, Bombus terrestris, Vespula germanica, Columba livia, Passer domesticus, Sturnus vulgaris, Bos taurus, Dama dama, Sus scrofa, Chaetophractus villosus)",
 "BasisOfRecord is one of (Machine Observation, Human Observation, Observation)",
 "HasCoordinate is true",
 "Year is greater than or equal to 1990"
 ]
}

 The dataset includes 68555760 records from 8318 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0018308-250914085247600/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/12215863
title: World Stock Prices ( Daily Updating )
DOI: 10.6084/m9.figshare.29364830
title: Key role of moss in satisfying the elevated plant nitrogen demand under warming in a permafrost ecosystem

description: This is the dataset for the manuscript entitled 'Key role of moss in satisfying the elevated plant nitrogen demand under warming in a permafrost ecosystem'.
DOI: 10.6084/m9.figshare.29364830.v1
title: Key role of moss in satisfying the elevated plant nitrogen demand under warming in a permafrost ecosystem

description: This is the dataset for the manuscript entitled 'Key role of moss in satisfying the elevated plant nitrogen demand under warming in a permafrost ecosystem'.
DOI: 10.6084/m9.figshare.29364830.v2
title: Key role of moss in satisfying the elevated plant nitrogen demand under warming in a permafrost ecosystem

description: This is the dataset for the manuscript entitled 'Key role of moss in satisfying the elevated plant nitrogen demand under warming in a permafrost ecosystem'.
DOI: 10.15468/dl.njbecr
title: Occurrence Download

description: A dataset containing 2565 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chersophilus duponti (Vieillot, 1824)",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "Country is Spain",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 },
 "DistanceFromCentroidInMeters is greater than or equal to 1000",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2015",
 "Month is not null"
 ]
}

 The dataset includes 2565 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056465-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.jadt89
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Synodontis zambezensis Peters, 1852",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((53.2221 -7.3094,53.175 -6.9401,52.2917 -6.9401,52.2873 -7.3844,52.5484 -7.6243,53.0196 -7.576,53.2221 -7.3094))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056466-250525065834625/datasets/export for details.
DOI: 10.5281/zenodo.15696692
title: Wikimedia: Wikimedia Commons (71) in DwCA

description: Wikimedia Commons is a media file repository making available public domain and freely-licensed educational media content (images, sound and video clips) to all. It acts as a common repository for the various projects of the Wikimedia Foundation, but you do not need to belong to one of those projects to use media hosted here. The repository is created and maintained not by paid-for artists but by volunteers. https://commons.wikimedia.org/wiki/Main_Page
Wikimedia Commons is a media file repository making available public domain and freely-licensed educational media content (images, sound and video clips) to all. It acts as a common repository for the various projects of the Wikimedia Foundation, but you do not need to belong to one of those projects to use media hosted here. The repository is created and maintained not by paid-for artists but by volunteers. 
https://commons.wikimedia.org/wiki/Main_Page
DOI: 10.15468/dl.krkda9
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((77.72657 35.83875,74.77665 36.07172,73.12181 35.07689,73.12181 32.99023,73.5535 31.53007,74.99249 30.41969,76.79123 29.17097,78.44607 28.09745,79.74116 27.71595,81.5399 30.23338,81.18015 31.16138,80.10091 32.01939,80.17286 34.24839,80.17286 35.54658,77.72657 35.83875))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Alnus nepalensis D.Don"
 ]
}

 The dataset includes 19 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056467-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.c3pvw9
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Caloneis bacillum (Grunow) Cleve, 1894",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((35.5808 -24.13,35.5909 -24.0715,30.5701 -24.0715,30.5701 -28.5786,32.4847 -28.5786,32.55 -28.5222,33.0346 -26.8668,32.9741 -26.7838,33.0415 -26.059,32.9304 -26.0011,32.7994 -26.1281,32.6834 -26.0015,32.813 -25.8728,32.8513 -25.7166,33.3048 -25.3731,35.1489 -24.6699,35.5808 -24.13))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056468-250525065834625/datasets/export for details.
DOI: 10.15468/dl.ny77sg
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Synodontis zambezensis Peters, 1852",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((37.7662 19.7333,37.7663 20.0599,37.1382 20.0599,37.1382 11.0599,44.3186 11.0599,44.0798 11.2595,43.8495 11.8222,43.8305 12.54,43.3858 13.2657,41.2508 15.1278,41.3523 15.6631,41.1413 16.086,40.7405 16.3725,40.5343 16.9022,39.5387 17.0726,39.1348 18.0388,39.3493 18.6268,39.116 19.1892,38.3245 19.7041,37.7662 19.7333))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056469-250525065834625/datasets/export for details.
DOI: 10.15468/dl.xczbju
title: Occurrence Download

description: A dataset containing 174 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((77.72657 35.83875,74.77665 36.07172,73.12181 35.07689,73.12181 32.99023,73.5535 31.53007,74.99249 30.41969,76.79123 29.17097,78.44607 28.09745,79.74116 27.71595,81.5399 30.23338,81.18015 31.16138,80.10091 32.01939,80.17286 34.24839,80.17286 35.54658,77.72657 35.83875))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is one of (Cedrus deodara (Lamb.) G.Don, Cedrus deodara f. deodara)"
 ]
}

 The dataset includes 174 records from 12 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056470-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.296jux
title: Occurrence Download

description: A dataset containing 268734 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((73 34,96 34,96 43,73 43,73 34))",
 "OccurrenceStatus is Present",
 "TaxonKey is Aves",
 "Year 1985-2025"
 ]
}

 The dataset includes 268734 records from 30 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056407-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.15696321
title: Simulation input and output files for: "Predicting residue ionization of OmpF channel using Constant pH Molecular Dynamics as benchmarking"

description: This dataset contains input and selected output files to reproduce one replica of the simulations described in the preprint:

"Predicting residue ionization of OmpF channel using Constant pH Molecular Dynamics as benchmarking"Available at bioRxiv: https://doi.org/10.1101/2025.06.16.659857

The files are organized in the CpH-MD-DPPC directory and include:

    Parameter (.mdp) files for Constant-pH Molecular Dynamics (CpH-MD) simulations

    System topology and starting structure files (.top, .gro, etc.)

    Output .xvg files from gmx cphmd, containing lambda values used to derive titration curves

Simulations were performed using a modified version of the GROMACS package that implements CpH-MD, available at:https://gitlab.com/gromacs-constantph/constantph

    Note: Full trajectory and log output files are not included here due to their large size. They are available upon reasonable request by contacting the corresponding author.

This dataset is intended as a supplementary resource to facilitate reproducibility and further analysis.
DOI: 10.5281/zenodo.15696322
title: Simulation input and output files for: "Predicting residue ionization of OmpF channel using Constant pH Molecular Dynamics as benchmarking"

description: This dataset contains input and selected output files to reproduce one replica of the simulations described in the preprint:

"Predicting residue ionization of OmpF channel using Constant pH Molecular Dynamics as benchmarking"Available at bioRxiv: https://doi.org/10.1101/2025.06.16.659857

The files are organized in the CpH-MD-DPPC directory and include:

    Parameter (.mdp) files for Constant-pH Molecular Dynamics (CpH-MD) simulations

    System topology and starting structure files (.top, .gro, etc.)

    Output .xvg files from gmx cphmd, containing lambda values used to derive titration curves

Simulations were performed using a modified version of the GROMACS package that implements CpH-MD, available at:https://gitlab.com/gromacs-constantph/constantph

    Note: Full trajectory and log output files are not included here due to their large size. They are available upon reasonable request by contacting the corresponding author.

This dataset is intended as a supplementary resource to facilitate reproducibility and further analysis.
DOI: 10.15468/dl.6mwj79
title: Occurrence Download

description: A dataset containing 45169 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Falco naumanni J.G.Fleischer, 1818",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "Country is Spain",
 "HasGeospatialIssue is false",
 "HasCoordinate is true",
 {
 "or" : [
 "CoordinateUncertaintyInMeters is less than 1000",
 "CoordinateUncertaintyInMeters is null"
 ]
 },
 "DistanceFromCentroidInMeters is greater than or equal to 1000",
 "OccurrenceStatus is Present",
 "Year is greater than or equal to 2015",
 "Month is not null"
 ]
}

 The dataset includes 45169 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056471-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26243021.v1
title: A dataset of patients with isolated and syndromic optic neuropathies linked to <i>RTN4IP1</i> genetic variants

description: Biallelic pathogenic variants of the Reticulon 4 interacting protein 1 (<i>RTN4IP1</i>)<i> </i>gene are responsible for optic atrophy, either isolated or associated with ataxia, mental retardation, and seizures. They are identified as a cause of hereditary optic neuropathy in 7% of patients diagnosed before the age of 20. We have built a dataset for this gene by collating all the clinical cases available in the literature, to which we have added the unpublished patients diagnosed at our centre, using standard nomenclature to describe both molecular and phenotypic features. We performed a comprehensive data analysis, based on computational reasoning, to provide an overall picture of the dataset and validate its relevance. This new dataset provides an updated genetic map of the reported pathogenic variants, an ontological annotation of phenotypic abnormalities in a grid format showing clinical heterogeneity, and a full interoperability with the databases of other genetic forms of optic neuropathies.
DOI: 10.15468/dl.kd7emc
title: Occurrence Download

description: A dataset containing 167 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((77.72657 35.83875,74.77665 36.07172,73.12181 35.07689,73.12181 32.99023,73.5535 31.53007,74.99249 30.41969,76.79123 29.17097,78.44607 28.09745,79.74116 27.71595,81.5399 30.23338,81.18015 31.16138,80.10091 32.01939,80.17286 34.24839,80.17286 35.54658,77.72657 35.83875))",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Juglans regia L."
 ]
}

 The dataset includes 167 records from 11 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056472-250525065834625/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.5y53py
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Synodontis zambezensis Peters, 1852",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((45.66 11.3473,45.0861 11.0599,46.1382 11.0599,46.1382 11.2722,45.66 11.3473))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056473-250525065834625/datasets/export for details.
DOI: 10.15468/dl.8et9cw
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Caloneis bacillum (Grunow) Cleve, 1894",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "BasisOfRecord is one of (Specimen, Living Specimen, Observation, Human Observation, Machine Observation, Material sample, Literature Occurrence, Material citation, Occurrence evidence)",
 "Geometry POLYGON ((31.8862 -21.3285,30.5701 -20.3186,30.5701 -24.0715,35.5909 -24.0715,35.6007 -24.0157,35.6007 -23.8125,35.4969 -23.7035,35.6007 -23.165,35.6007 -22.9702,35.227 -22.2482,34.6862 -21.6944,34.013 -21.3095,33.5 -21.1593,32.9675 -21.1092,32.4352 -21.1612,31.8862 -21.3285))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0056474-250525065834625/datasets/export for details.
DOI: 10.6084/m9.figshare.28407831
title: Penetrating Keratoplasty versus Deep Anterior Lamellar Keratoplasty for Keratoconus: A Systematic Review and Meta-Analysis of 27,018 Eyes

description: Keratoconus is a bilateral asymmetrical degeneration in the cornea. It is associated with local thinning in the cornea leading to visual problems such as myopia and astigmatism. Several treatments, such as lenses and keratoplasty surgeries, were utilized to treat this condition. In this study, we aim to compare deep anterior lamellar keratoplasty (DALK) to penetrating keratoplasty (PK). We registered our study protocol on PROSPERO (CRD42024559427). Following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines, we searched four electronic databases (PubMed, Scopus, Cochrane Library, and Web of Science) to identify eligible studies reported up to June 2024. Using STATA 17, we reported outcomes as risk ratios (RRs) or mean difference (MD) and confidence intervals (CIs). A P-value ≤.05 is considered as statistically significant. The meta-analysis included a total of 47 studies with a total number of 27,018 eyes. There was no significant difference between PK and DALK in terms of best-corrected visual acuity (BCVA) at 1 year (Hedge’s g: 0.03 with 95% CI [−0.13, 0.19], <i>p</i> = .71). PK was associated with a lower risk of graft failure than DALK (log RR: −0.41 with 95% CI [−0.74, −0.08], <i>p</i> = .01). PK was associated with a higher risk of graft rejection than DALK (log RR: 0.85 with 95% CI [0.35, 1.35], <i>p</i> &lt; .001). There was no significant difference between PK and DALK in terms of corneal astigmatism at 1 year (Hedge’s g: 0.03 with 95% CI [−0.24, 0.31], <i>p</i> = .82). The visual outcomes such as BCVA, astigmatism, and spherical equivalent refraction, of PK and DALK are comparable. However, PK was associated with a higher risk of complications and rejection episodes, but, a lower risk of graft failure.