cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.25346/s6/cxo9pd/woccgb
title: 2011+07_BCOUT_iatp50_3M.txt
DOI: 10.25346/s6/cxo9pd/womhcj
title: 1999+06_OCOUT_iatp50_3M.txt
DOI: 10.6075/j06t0mts
title: Samoa 2017-12 (Expedition) - Upolu (Island) - Raw Images. In 100 Island Challenge Collection

description: In December of 2017, the 100 Island Challenge team visited Upolu to collect large area imagery as part of the Samoa 2017-12 expedition. The imagery collected here established permanent sites that were resurveyed during the Samoa 2019-12 expedition. For each site, a preview image and the raw digital images used to create composite large-area image products of the underwater sites have been made available. A general description of the methods used to acquire the images can be found in a README.txt file contained within each component. Site specific metadata can be found within a METADATA.txt file contained within each component.
DOI: 10.25346/s6/cxo9pd/wopsei
title: 2002+09_SSOUT_iatp50_3M.txt
DOI: 10.25346/s6/cxo9pd/wpmxvm
title: 2008+10_SUOUT_iatp50_3M.nc
DOI: 10.25346/s6/cxo9pd/wpx8ad
title: 1999+05_BCOUT_iatp50_3M.nc
DOI: 10.25346/s6/cxo9pd/wrbk0s
title: 2005+12_BCOUT_iatp50_3M.txt
DOI: 10.25346/s6/cxo9pd/wrnh7f
title: 2001+03_BCOUT_iatp50_3M.nc
DOI: 10.25346/s6/cxo9pd/wruxea
title: 2001+11_SUOUT_iatp50_3M.nc
DOI: 10.25346/s6/cxo9pd/wrxxga
title: 2003+01_OCOUT_iatp50_3M.txt
DOI: 10.25346/s6/cxo9pd/wrzg1x
title: 1999+07_OCOUT_iatp50_3M.txt
DOI: 10.25346/s6/cxo9pd/ws2okh
title: 1998+04_BCOUT_iatp50_3M.txt
DOI: 10.25346/s6/cxo9pd/ws4arl
title: 2006+03_SUOUT_iatp50_3M.txt
DOI: 10.25346/s6/cxo9pd/wsjalg
title: 2014+11_DUOUT_iatp50_3M.nc
DOI: 10.25346/s6/cxo9pd/wt4l95
title: 2010+11_SUOUT_iatp50_3M.txt
DOI: 10.6073/pasta/78ed92529e6c44309f719f604821a202
title: Physical Hydrologic Data for the National Audubon Society's 16 Research Sites in coastal mangrove transition zone of southern Florida, March 1986 - ongoing

description: Temperature, salinity and depth were continuously collected using Hydrolab/Hach sensors within the coastal mangrove transition zone at 16 sites from southern Biscayne Bay to Cape Sable. Data were collected at 12 sites within the coastal mangrove zone of Everglades National Park, incorporating the Cape Sable, Taylor River and Panhandle region. Data were collected at 4 sites within the coastal mangrove zone of southern Biscayne Bay, incorporating the Manatee Bay, Barnes Sound, and Card Sound regions. Rainfall, pH, and dissolved oxygen were collected at a number of these sites with varying periods of record.
DOI: 10.5517/ccdc.csd.cc25rwd7
title: CCDC 2018949: Experimental Crystal Structure Determination

description: Related Article: Yuan-Yu Yang, Jian-Hua Xue, Dong-Dong Yang, Li-Yang Zhang, Qi Ma, Xuan Zhao|2024|CrystEngComm|26|170|doi:10.1039/D3CE01076G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25rwf8
title: CCDC 2018950: Experimental Crystal Structure Determination

description: Related Article: Yuan-Yu Yang, Jian-Hua Xue, Dong-Dong Yang, Li-Yang Zhang, Qi Ma, Xuan Zhao|2024|CrystEngComm|26|170|doi:10.1039/D3CE01076G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.5517/ccdc.csd.cc25rwg9
title: CCDC 2018951: Experimental Crystal Structure Determination

description: Related Article: Yuan-Yu Yang, Jian-Hua Xue, Dong-Dong Yang, Li-Yang Zhang, Qi Ma, Xuan Zhao|2024|CrystEngComm|26|170|doi:10.1039/D3CE01076G
description: An entry from the Cambridge Structural Database, the world’s repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
DOI: 10.7294/24961872.v1
title: Dataset and code for "Unexpected effect of geographic origin on post-translocation survival in a long-lived reptile"

description: Data include release and mortality information for 2,822 gopher tortoises (<i>Gopherus polyphemus</i>) translocated to Nokuse, a private reserve in the panhandle of Florida. Mitigation translocations move wildlife from specific areas due to conflict with humans over land use at the site. A critical decision when carrying out mitigation translocation is the acceptable distance across which animals can be moved. This decision trades off logistical expediency of unrestricted translocation with the risk of reducing translocation success due to environmental mismatch between origin and translocation site conditions. In this study, we used a large dataset of 502 individually identifiable carcasses to examine the role of geographic origin and translocation distance in the relative survival of 2,822 translocated subadult and adult gopher tortoise<i>s (Gopherus polyphemus</i>), a species experiencing large-scale mitigation translocation, at a recipient site in the Florida panhandle, USA. We hypothesized that if climate or habitat differences between the origin and translocation site influenced survival, tortoises translocated from within the Florida panhandle would have the highest survival. To the contrary, we found that survival slightly increased with increasing climatic difference between origin and recipient site, driven by higher survival of tortoises coming from central Florida sites compared to those from the panhandle and north Florida. This suggests that environmental mismatch due to long-distance translocation is not a main driver of mortality. These models also indicated an effect of season, with a survival advantage to tortoises translocated in the spring and late fall, relative to summer translocations, and a negative effect of initial density on survival. Finally, we also estimated the upper bound on annual survival in three well-monitored groups to be quite low (92-95%) for several years following release, suggesting caution when considering large translocated populations to be viable without first assessing adult survival. Our unexpected results highlight the importance of investigating species-specific sensitivities to translocation distances and indicate the limitations of assumed linear effects of translocation distance on outcomes.<br>
DOI: 10.25444/nhlbi.23601000
title: In vitro phosphorylation of synthetic AQP2 peptide by candidate kinases

description:  
Vasopressin-regulated water channel protein aquaporin-2 (AQP2) plays an essential role in water transport across kidney collecting duct. Vasopressin regulates AQP2 by triggering phosphorylation changes in four serine residues at its carboxyl-terminal end (S256, S261, S264, S269). Phosphorylation of AQP2 at S269 is known to potentiate AQP2 localization at the apical plasma membrane of collecting duct cells, rendering cell membrane permeable to water.  However, the protein kinase(s) responsible for S269 phosphorylation following vasopression stimulation remain unknown.  To address this question, we first performed Bayes' analysis to rank all mammalian protein kinases with regard to their likelihood of phosphorylating AQP2 at S269 using multi -omics datasets integration methods. We then used the list of prioritized kinases to choose a set of commerically available recombinant kinases to test their ability to phosphorylate synthetic AQP2 peptide <em>in vitro</em>.
Synthetic AQP2 peptide (QSVELHSPQSLPRGSKA) corresponding to the previously identified phosphorylation sites with or without pre-phosphorylation at S256 were used in <em>in vitro</em> phosphorylation experiments. In addition, as positive controls, a mixture of peptides consisting of all commercially available control peptide substrates for the kinases tested was also included. Synthetic peptides, 2 nmol each, were incubated with ATP and reaction buffer in the presence or absence of 0.5 μM of active recombinant kinases in a total reaction volume of 30 μl and incubated at 30°C for 1 h. Reactions were stopped by adding 70 μl water to reaction tube and filtering through a 30K molecular weight cut-off Amicon centrifuge filter at 14,000 x g for 30 min. The filtrate was dried and subjected to Zip-Tip cleaning for desalting before mass spectrometry analysis (LC-MS/MS).  
LC-MS/MS was carried out in an Orbitrap Fusion Lumos mass spectrometer (Thermo Scientific) using data-dependent proteomic analysis (DDA) method. MS spectrum raw files were searched for AQP2 phosphorylation at S256, S261, S264, S269 sites using MaxQuant 1.6.4.0.
DOI: 10.25444/nhlbi.23601000.v1
title: In vitro phosphorylation of synthetic AQP2 peptide by candidate kinases

description:  
Vasopressin-regulated water channel protein aquaporin-2 (AQP2) plays an essential role in water transport across kidney collecting duct. Vasopressin regulates AQP2 by triggering phosphorylation changes in four serine residues at its carboxyl-terminal end (S256, S261, S264, S269). Phosphorylation of AQP2 at S269 is known to potentiate AQP2 localization at the apical plasma membrane of collecting duct cells, rendering cell membrane permeable to water.  However, the protein kinase(s) responsible for S269 phosphorylation following vasopression stimulation remain unknown.  To address this question, we first performed Bayes' analysis to rank all mammalian protein kinases with regard to their likelihood of phosphorylating AQP2 at S269 using multi -omics datasets integration methods. We then used the list of prioritized kinases to choose a set of commerically available recombinant kinases to test their ability to phosphorylate synthetic AQP2 peptide <em>in vitro</em>.
Synthetic AQP2 peptide (QSVELHSPQSLPRGSKA) corresponding to the previously identified phosphorylation sites with or without pre-phosphorylation at S256 were used in <em>in vitro</em> phosphorylation experiments. In addition, as positive controls, a mixture of peptides consisting of all commercially available control peptide substrates for the kinases tested was also included. Synthetic peptides, 2 nmol each, were incubated with ATP and reaction buffer in the presence or absence of 0.5 μM of active recombinant kinases in a total reaction volume of 30 μl and incubated at 30°C for 1 h. Reactions were stopped by adding 70 μl water to reaction tube and filtering through a 30K molecular weight cut-off Amicon centrifuge filter at 14,000 x g for 30 min. The filtrate was dried and subjected to Zip-Tip cleaning for desalting before mass spectrometry analysis (LC-MS/MS).  
LC-MS/MS was carried out in an Orbitrap Fusion Lumos mass spectrometer (Thermo Scientific) using data-dependent proteomic analysis (DDA) method. MS spectrum raw files were searched for AQP2 phosphorylation at S256, S261, S264, S269 sites using MaxQuant 1.6.4.0.
DOI: 10.34943/c65f2d06-c605-4ad5-a6a4-408771b3001f
title: Endeavour North Acoustic Doppler Current Profiler 75 kHz Deployed 2011-09-13

description: The RDI Workhorse Long Ranger ADCP 75 kHz (3868) was deployed on 2011-09-13 at Endeavour North. This north section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Acoustic Doppler Current Profiler 75 kHz. Acoustic Doppler Current Profilers (ADCP) are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 2.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.34943/bc7e0181-1d57-4deb-8b4d-838013531092
title: Endeavour North Acoustic Doppler Current Profiler 75 kHz Deployed 2011-09-13

description: The RDI Workhorse Long Ranger ADCP 75 kHz (3868) was deployed on 2011-09-13 at Endeavour North. This north section of the Endeavour Hydrothermal Vents includes two moorings to monitor the regional circulation. This device is a Acoustic Doppler Current Profiler 75 kHz. Acoustic Doppler Current Profilers (ADCP) are hydroacoustic instruments, similar to sonars. ADCPs measure current speed and direction at multiple predetermined depths simultaneously. ADCPs use the Doppler effect of sound waves that are scattered by particles in seawater over a depth range. It was deployed on a fixed platform. Data from this deployment were archived and made available through Ocean Networks Canada's Oceans 3.0 digital infrastructure, with quality assurance and derived data products following established practices.
DOI: 10.5281/zenodo.10475859
title: PROJECT PLANNING AND THE SUCCESS OF MTN BOREHOLE PROJECT IN RUHANGO DISTRICT, RWANDA

description: Abstract: 

The study investigated the project planning and success of MTN Borehole Project in Ruhango District, Rwanda. The specific objectives are to determine the effect of resource planning on the success of MTN Borehole project in Ruhango District; the effect of time schedule on the success of MTN Borehole project in Ruhango District; the effect of scope planning on the success of MTN Borehole project in Ruhango District; and the effect of Risk management on success of MTN Borehole projects in Ruhango District. The descriptive and correlative research design were used in this study deeply to investigate and analyze the project planning and project success. Target population was 145 employees in Ruhango District. The use census survey used to select all 145 people as sample size. Data collection methods were documentary analysis; and questionnaire. Descriptive statistic method was used to analyze the collected data; correlation coefficient and multiple linear Regression analysis models. The results revealed that positive and strong correlation between project communication planning and success of MTN Borehole project in Ruhango District as Pearson correlation was 0.891** with the p-value of 0.000 which is less than standard significance level of 0.01. This indicates that, out of the considered other factors influence success of MTN Bore Hole projects in Ruhango District. The results show that there is a positive and very strong correlation between Project Time schedule and the success of MTN Borehole project in Ruhango District as Pearson correlation is 0.905** with the p-value of 0.000 which is less than standard significance levels of 0.01. Findings show that there is a positive and very strong correlation between Project Scope Planning and the success of MTN Borehole project in Ruhango District as Pearson correlation is 0.941** with the p-value is 0.000, which is less than standard significance level of 0.01. This indicates that, out of the considered other factors influencing success of MTN Borehole project in Ruhango District., only Project Scope Planning have significant and positive relationship of 94.1% with the success of MTN Borehole project in Ruhango District. Findings show that there is a positive and very strong correlation between Project Risk management and the success of MTN Borehole project in Ruhango District as Pearson correlation show 0.992**with the p-value is 0.000, which is less than standard significance level of 0.01. The findings revealed that the level of significance was 0.000(b) this implies that the regression model is significant in predicting the relationship between project planning and success of MTN Borehole projects in Ruhango District. The findings showed level of f-test model is 2461.901 which is positive with p-value of 0.000b less than both standard significance levels of 0.05 and 0.01. This means that the study retained all alternative hypotheses.
DOI: 10.5281/zenodo.10475860
title: PROJECT PLANNING AND THE SUCCESS OF MTN BOREHOLE PROJECT IN RUHANGO DISTRICT, RWANDA

description: Abstract: 

The study investigated the project planning and success of MTN Borehole Project in Ruhango District, Rwanda. The specific objectives are to determine the effect of resource planning on the success of MTN Borehole project in Ruhango District; the effect of time schedule on the success of MTN Borehole project in Ruhango District; the effect of scope planning on the success of MTN Borehole project in Ruhango District; and the effect of Risk management on success of MTN Borehole projects in Ruhango District. The descriptive and correlative research design were used in this study deeply to investigate and analyze the project planning and project success. Target population was 145 employees in Ruhango District. The use census survey used to select all 145 people as sample size. Data collection methods were documentary analysis; and questionnaire. Descriptive statistic method was used to analyze the collected data; correlation coefficient and multiple linear Regression analysis models. The results revealed that positive and strong correlation between project communication planning and success of MTN Borehole project in Ruhango District as Pearson correlation was 0.891** with the p-value of 0.000 which is less than standard significance level of 0.01. This indicates that, out of the considered other factors influence success of MTN Bore Hole projects in Ruhango District. The results show that there is a positive and very strong correlation between Project Time schedule and the success of MTN Borehole project in Ruhango District as Pearson correlation is 0.905** with the p-value of 0.000 which is less than standard significance levels of 0.01. Findings show that there is a positive and very strong correlation between Project Scope Planning and the success of MTN Borehole project in Ruhango District as Pearson correlation is 0.941** with the p-value is 0.000, which is less than standard significance level of 0.01. This indicates that, out of the considered other factors influencing success of MTN Borehole project in Ruhango District., only Project Scope Planning have significant and positive relationship of 94.1% with the success of MTN Borehole project in Ruhango District. Findings show that there is a positive and very strong correlation between Project Risk management and the success of MTN Borehole project in Ruhango District as Pearson correlation show 0.992**with the p-value is 0.000, which is less than standard significance level of 0.01. The findings revealed that the level of significance was 0.000(b) this implies that the regression model is significant in predicting the relationship between project planning and success of MTN Borehole projects in Ruhango District. The findings showed level of f-test model is 2461.901 which is positive with p-value of 0.000b less than both standard significance levels of 0.05 and 0.01. This means that the study retained all alternative hypotheses.
DOI: 10.5281/zenodo.10475790
title: Data on Advanced Nanoscale Bulk FinFET's Self-Heating  accounting for degraded thermal conductivity at the nanoscale

description: This folder contains the open data in readable and interoperable MATLAB format regarding the SIE 2023 presentation on "Assessment of Advanced Nanoscale Bulk FinFET’s Self-Heating accounting for degraded thermal conductivity at the nanoscale" by L.Tondelli et al. 

Acknowledgements: This work received partial support by the European Union via the NextGenerationEU programme, Italian PNRR M4C2 1.5 action, ECOSISTER project, SP6 WP2
DOI: 10.5281/zenodo.10475791
title: Data on Advanced Nanoscale Bulk FinFET's Self-Heating  accounting for degraded thermal conductivity at the nanoscale

description: This folder contains the open data in readable and interoperable MATLAB format regarding the SIE 2023 presentation on "Assessment of Advanced Nanoscale Bulk FinFET’s Self-Heating accounting for degraded thermal conductivity at the nanoscale" by L.Tondelli et al. 

Acknowledgements: This work received partial support by the European Union via the NextGenerationEU programme, Italian PNRR M4C2 1.5 action, ECOSISTER project, SP6 WP2
DOI: 10.6073/pasta/64db0cd6d007ca9c111b9e0eb1b71738
title: Hubbard Brook Experimental Forest: Soil Profile Maps and Horizon Thicknesses on Watershed 5, 1983-1998

description: We sampled soils prior to the whole-tree harvest of watershed 5 at
 Hubbard Brook Experimental Forest in 1983, and again in 1986, 1991,
 and 1998, using the quantitative soil pit method. Here we report
 horizon thicknesses and present hand drawn maps of the sides of a
 subset of the 239 sampling pits excavated over the four sampling
 years. Note that U.S. standard soil horizon nomenclature changed
 between 1983 and 1986. In nearly all cases, the 1983 horizon
 designations have the following equivalencies: A2 = E, Bhir = Bs, Bir
 = Bs1, B23 and B23+ = Bs2.

 
 These data were gathered as part of the Hubbard Brook Ecosystem Study
 (HBES). The HBES is a collaborative effort at the Hubbard Brook
 Experimental Forest, which is operated and maintained by the USDA
 Forest Service, Northern Research Station. 

 
 An analysis of these data has been published in: Johnson, C.E., A.H.
 Johnson, T.G. Huntington, and T.G. Siccama. 1991. Whole-tree
 clear-cutting effects on soil horizons and organic-matter pools. Soil
 Science Society of America Journal. 55:497-502.
 https://doi.org/10.2136/sssaj1991.03615995005500020034x
DOI: 10.6073/pasta/d786872624d2a98a7bacc060213b26a2
title: Cone Pond, Thornton, NH water chemistry

description: Cone Pond is an acidic pond on the White Mountain National Forest, NH,
 USA that was monitored for several decades to investigate the ecology
 of an acidic aquatic ecosystem and to document impacts of acid
 deposition. This dataset includes chemical analyses of water samples
 collected at Cone Pond from 1988 to 2013.
DOI: 10.6073/pasta/3511ed3f4a50ee86fddb3fbf8b42ccd5
title: Fine Litterfall Data at the Hubbard Brook Experimental Forest, 1992 - present

description: Fine litterfall (leaves, twigs, fruits, seeds, etc.) is
 collected in Watershed 1, Watershed 5, the Throughfall plots
 and the Bear Brook Watershed reference forest, located to the
 west of Watershed 6, to quantify carbon and nutrient flux
 associated with this important pathway. In addition,
 measurements of area per leaf are combined with counts of
 leaves for each tree species to quantify leaf area index of
 the forest. These measurements have facilitated
 quantification of ice storm effects and species declines
 (paper birch, sugar maple).
 These data were gathered as part of the Hubbard Brook
 Ecosystem Study (HBES). The HBES is a collaborative effort at
 the Hubbard Brook Experimental Forest, which is operated and
 maintained by the USDA Forest Service, Northern Research
 Station.
DOI: 10.6073/pasta/fcfa498c5562ee55f6e84d7588a980d2
title: Longitudinal Stream Chemistry at the Hubbard Brook Experimental Forest, Watershed 1, 1991 - present.

description: Longitudinal variation in streamwater chemistry has been
 measured in two watersheds (W1 and W6) at the Hubbard Brook
 Experimental Forest. This dataset includes samples that have
 been collected approximately monthly in Watershed 1 at five
 sampling locations (1991 – present) along an elevational
 gradient. Samples are analyzed for pH, ANC, anions, cations,
 nitrogen, dissolved inorganic and organic carbon.