cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.3886/e120661v1
title: Data and Code for: A Proposed Specification Check for P-Hacking

description: This paper proposes a specification check for p-hacking. More specifically, we advocate the reporting of t-curves and mu-curves - the t-statistics and estimated effect sizes derived from regressions using every possible combination of control variables from the researchers set - and introduce a standardized and accessible implementation. Our specification check allows researchers, referees and editors to visually inspect variation in effect sizes, significativity and sensitivity to the inclusion of control variables. We provide a Stata command which implements the specification check. <br>
DOI: 10.5519/qd.eu0n3js1
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (1001 records)
DOI: 10.17632/ycnx37zj4b.2
title: Hidden long-distance movements by a migratory bird
DOI: 10.15468/kws2jm
title: A new species of Caroperla Kohno, 1946 (Plecoptera: Perlidae) from Guangxi of China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Mo, Raorao, Wang, Guoquan, Li, Weihai (2019): A new species of Caroperla Kohno, 1946 (Plecoptera: Perlidae) from Guangxi of China. Zootaxa 4612 (4): 591-594, DOI: https://doi.org/10.11646/zootaxa.4612.4.11
DOI: 10.15468/jgtb3y
title: A new subspecies of Dysiatus from the Sangihe and Talaud islands (Coleoptera: Cerambycidae, Prioninae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Missori, Paolo, Ercoli, Lucia (2019): A new subspecies of Dysiatus from the Sangihe and Talaud islands (Coleoptera: Cerambycidae, Prioninae). Zootaxa 4614 (1): 195-200, DOI: https://doi.org/10.11646/zootaxa.4614.1.12
DOI: 10.6084/m9.figshare.12554663
title: Behavioral and neuronal underpinnings of safety in numbers in fruit flies

description: This is the dataset used in Ferreira, CH and Moita, MA.Behavioral and neuronal underpinnings of safety in numbers in fruit flies. Nature Communications. CSVs files contain the raw data for each fly after videos were processed in idtracker and ‘fly motion quantifier’. They are separated in folders whose naming refers to the experiments described in the paper, containing information on group size, genotype and/or type of experimental manipulation. The name of each CSV file includes: 1) the number of flies in the group, allowing analysis by group size ; 2) the group identifier - each replicate was numbered so that flies could be correctly assigned to the group in which they were tested; 3) the arena identifier - the setup contained two side-by-side chambers, designated cond 1 and 2. For all analysis in the paper we used the data columns 1, 3, 4 and 6-8, which are indexed in the file and correspond to: video frame (1), absolute motion around the fly (3), velocity (4), position X (6), position Y (7), led (8). Note that the collisions data in the raw file is incorrect and these were calculated with X Y positions as described in the paper. To align video recordings to the start of the experiment and time of looming stimuli onset, we used the red LED as reference relative to which all timepoints were defined. To this end we used the LED column, which contains the light intensity values in an ROI around the LED (LED on corresponds to light intensity values over 5000 for magnets data and over 70000 for the remaining data). The LED blinked twice at experiment start and end, and once at each looming presentation. For the analysis in the manuscript, the raw data was cut such that only frames after experiment start and before end were included. In order to convert speed in pixel/frame to mm/s, we estimated the arena radius in pixels for each arena of the setup, cond 1 being 476 pixels and cond 2 being 432 pixels. All remaining details regarding data analysis are described in the accompanying manusc
DOI: 10.6084/m9.figshare.12554663.v1
title: Behavioral and neuronal underpinnings of safety in numbers in fruit flies

description: This is the dataset used in Ferreira, CH and Moita, MA.Behavioral and neuronal underpinnings of safety in numbers in fruit flies. Nature Communications. CSVs files contain the raw data for each fly after videos were processed in idtracker and ‘fly motion quantifier’. They are separated in folders whose naming refers to the experiments described in the paper, containing information on group size, genotype and/or type of experimental manipulation. The name of each CSV file includes: 1) the number of flies in the group, allowing analysis by group size ; 2) the group identifier - each replicate was numbered so that flies could be correctly assigned to the group in which they were tested; 3) the arena identifier - the setup contained two side-by-side chambers, designated cond 1 and 2. For all analysis in the paper we used the data columns 1, 3, 4 and 6-8, which are indexed in the file and correspond to: video frame (1), absolute motion around the fly (3), velocity (4), position X (6), position Y (7), led (8). Note that the collisions data in the raw file is incorrect and these were calculated with X Y positions as described in the paper. To align video recordings to the start of the experiment and time of looming stimuli onset, we used the red LED as reference relative to which all timepoints were defined. To this end we used the LED column, which contains the light intensity values in an ROI around the LED (LED on corresponds to light intensity values over 5000 for magnets data and over 70000 for the remaining data). The LED blinked twice at experiment start and end, and once at each looming presentation. For the analysis in the manuscript, the raw data was cut such that only frames after experiment start and before end were included. In order to convert speed in pixel/frame to mm/s, we estimated the arena radius in pixels for each arena of the setup, cond 1 being 476 pixels and cond 2 being 432 pixels. All remaining details regarding data analysis are described in the accompanying manusc
DOI: 10.5517/ccdc.csd.cc2557m7
title: CCDC 2001038: Experimental Crystal Structure Determination

description: Related Article: Emily K. Kirkeby, Andrew G. Roberts|2020|Chem.Commun.|56|9118|doi:10.1039/D0CC03503C
DOI: 10.5517/ccdc.csd.cc2557n8
title: CCDC 2001039: Experimental Crystal Structure Determination

description: Related Article: Emily K. Kirkeby, Andrew G. Roberts|2020|Chem.Commun.|56|9118|doi:10.1039/D0CC03503C
DOI: 10.5517/ccdc.csd.cc2557p9
title: CCDC 2001040: Experimental Crystal Structure Determination

description: Related Article: Emily K. Kirkeby, Andrew G. Roberts|2020|Chem.Commun.|56|9118|doi:10.1039/D0CC03503C
DOI: 10.5517/ccdc.csd.cc258m36
title: CCDC 2004277: Experimental Crystal Structure Determination

description: Related Article: Yuanyuan Li, Mingbo Zhou, Ling Xu, Bixiang Zhou, Yutao Rao, Haigen Nie, Tingting Gu, Jie Zhou, Xu Liang, Bangshao Yin, Weihua Zhu, Atsuhiro Osuka, Jianxin Song|2020|Org.Lett.|22|6001|doi:10.1021/acs.orglett.0c02084
DOI: 10.5517/ccdc.csd.cc258m47
title: CCDC 2004278: Experimental Crystal Structure Determination

description: Related Article: Yuanyuan Li, Mingbo Zhou, Ling Xu, Bixiang Zhou, Yutao Rao, Haigen Nie, Tingting Gu, Jie Zhou, Xu Liang, Bangshao Yin, Weihua Zhu, Atsuhiro Osuka, Jianxin Song|2020|Org.Lett.|22|6001|doi:10.1021/acs.orglett.0c02084
DOI: 10.5517/ccdc.csd.cc258m58
title: CCDC 2004279: Experimental Crystal Structure Determination

description: Related Article: Yuanyuan Li, Mingbo Zhou, Ling Xu, Bixiang Zhou, Yutao Rao, Haigen Nie, Tingting Gu, Jie Zhou, Xu Liang, Bangshao Yin, Weihua Zhu, Atsuhiro Osuka, Jianxin Song|2020|Org.Lett.|22|6001|doi:10.1021/acs.orglett.0c02084
DOI: 10.5517/ccdc.csd.cc258m69
title: CCDC 2004280: Experimental Crystal Structure Determination

description: Related Article: Yuanyuan Li, Mingbo Zhou, Ling Xu, Bixiang Zhou, Yutao Rao, Haigen Nie, Tingting Gu, Jie Zhou, Xu Liang, Bangshao Yin, Weihua Zhu, Atsuhiro Osuka, Jianxin Song|2020|Org.Lett.|22|6001|doi:10.1021/acs.orglett.0c02084
DOI: 10.6084/m9.figshare.12844403.v1
title: R0186_20170822a_videos

description: Rat 0186, skilled reaching data collected on 8/22/2017 in Leventhal laboratory by Alexandra Bova
DOI: 10.6084/m9.figshare.12844403
title: R0186_20170822a_videos

description: Rat 0186, skilled reaching data collected on 8/22/2017 in Leventhal laboratory by Alexandra Bova
DOI: 10.5517/ccdc.csd.cc25fq1d
title: CCDC 2009173: Experimental Crystal Structure Determination

description: Related Article: Kossi Efouako Soklou, Hamid Marzag, Jean-Philippe Bouillon, Mathieu Marchivie, Sylvain Routier, Karen Plé|2020|Org.Lett.|22|5973|doi:10.1021/acs.orglett.0c02070
DOI: 10.5517/ccdc.csd.cc2573wf
title: CCDC 2002844: Experimental Crystal Structure Determination

description: Related Article: Li-Long Dang, Xiang Gao, Yue-Jian Lin, Guo-Xin Jin|2020|Chemical Science|11|8013|doi:10.1039/D0SC02733B
DOI: 10.5517/ccdc.csd.cc2573xg
title: CCDC 2002845: Experimental Crystal Structure Determination

description: Related Article: Li-Long Dang, Xiang Gao, Yue-Jian Lin, Guo-Xin Jin|2020|Chemical Science|11|8013|doi:10.1039/D0SC02733B
DOI: 10.5517/ccdc.csd.cc2573yh
title: CCDC 2002846: Experimental Crystal Structure Determination

description: Related Article: Li-Long Dang, Xiang Gao, Yue-Jian Lin, Guo-Xin Jin|2020|Chemical Science|11|8013|doi:10.1039/D0SC02733B
DOI: 10.5517/ccdc.csd.cc2573vd
title: CCDC 2002843: Experimental Crystal Structure Determination

description: Related Article: Li-Long Dang, Xiang Gao, Yue-Jian Lin, Guo-Xin Jin|2020|Chemical Science|11|8013|doi:10.1039/D0SC02733B
DOI: 10.5517/ccdc.csd.cc25748v
title: CCDC 2002856: Experimental Crystal Structure Determination

description: Related Article: Li-Long Dang, Xiang Gao, Yue-Jian Lin, Guo-Xin Jin|2020|Chemical Science|11|8013|doi:10.1039/D0SC02733B
DOI: 10.15468/rxxmwp
title: Anthias albofasciatus Fowler and Bean, 1930, a junior synonym of Tosana niwae Smith and Pope, 1906 (Teleostei: Serranidae: Anthiadinae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Gill, Anthony C., Anderson Jr, William D., Williams, Jeffrey T. (2019): Anthias albofasciatus Fowler and Bean, 1930, a junior synonym of Tosana niwae Smith and Pope, 1906 (Teleostei: Serranidae: Anthiadinae). Zootaxa 4614 (3): 566-574, DOI: https://doi.org/10.11646/zootaxa.4614.3.8
DOI: 10.5281/zenodo.3994592
title: GGCMI Phase 2: Crop model emulators of irrigation water demand (IWD)

description: Polynomial emulators of irrigation water demand for globally gridded crop models from the GGCM phase 2 project. A0: no growing season adaptation. A1: with growing season adaptation. See: https://doi.org/10.5194/gmd-2019-365 and https://doi.org/10.5194/gmd-13-2315-2020 for more details. Note: the GEPIC emulator for maize and soy (A0) is not available.
DOI: 10.15468/qr836x
title: Hamadiana chapadensis, a new genus and species of diving beetle from Brazil (Coleoptera, Dytiscidae, Laccophilinae, Laccophilini)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Benetti, Cesar J., Short, Andrew E. Z., Michat, Mariano C. (2019): Hamadiana chapadensis, a new genus and species of diving beetle from Brazil (Coleoptera, Dytiscidae, Laccophilinae, Laccophilini). Zootaxa 4615 (1): 176-184, DOI: https://doi.org/10.11646/zootaxa.4615.1.10
DOI: 10.7910/dvn/9lex1o/v66nq9
title: Tables (Atorvastatin).docx

description: :unav
DOI: 10.7910/dvn/9lex1o/pdsqqy
title: Stat (AS).docx

description: :unav
DOI: 10.7910/dvn/9lex1o/s5w2pk
title: M. Methods (Hrv).docx

description: :unav
DOI: 10.7910/dvn/9lex1o/aqwnbi
title: Tables (Atorvastatin)-1.docx

description: :unav
DOI: 10.7910/dvn/9lex1o/m3b4pk
title: M.+Methods+(Hrv)-1.docx

description: :unav
DOI: 10.5281/zenodo.3995319
title: Database of infection control and surveillance program, 2011-2018

description: A full anonymized data set collected as a part of ICU infection control and surveillance program; 01/01/2011-01/01-2018 Files "VAE_Data_Main_0821_1338.csv" contains daily data (one row is one day) on infection surveillance ordered by date. Files "Data_Dictionary_MainDB.csv" contains the description of all variables from the main data set.
description: {"references": ["Savin I, Ershova K, Kurdyumova N, et al. Healthcare-associated ventriculitis and meningitis in a neuro-ICU: Incidence and risk factors selected by machine learning approach. J Crit Care [Internet] 2018;45:95\u2013104. Available from: http://dx.doi.org/10.1016/j.jcrc.2018.01.022"]}
DOI: 10.6084/m9.figshare.12845105
title: Gene database of Lactobacillus pentosus strain DSM 20314

description: This work sought to provide fundamental information about the genetic repertoire of <i>Lactobacillus pentosus</i> strain DSM 20314 by parsing the annotated genome sequence of the bacterium downloaded from Genbank. Comprising gene name, gene function, and gene sequence, the resource should find use in a variety of fundamental and applied microbiology workflows.
DOI: 10.5281/zenodo.1021503
title: Database of infection control and surveillance program, 2010-2017

description: A full anonymized database from infection control and surveillance program at the ICU, collected from October 1st, 2010 to June 30th, 2017. Files "database_infection_monitoring_NSI_days" contain information about each day (one row is one day) of infection monitoring ordered by the date and then by ID. The size of this database is (40366, 243). Files "database_infection_monitoring_NSI_patients" contain information collapsed by patients (one row is one patient) and ordered by date. The size of this database is (2286, 234). Both databases have primarily collected original features as well as aggregated features which were generated from original features. Both databases are provided in two data formats: .csv and .pkl. The python code to generate aggregated features is also available.
DOI: 10.5281/zenodo.3995396
title: Jfreechart dataset

description: Datasets and analysis script for the article "Can Refactorings Indicate Design Tradeoffs?" submitted to SCAM 2020, NIER under double-blind review and provided as-is.
DOI: 10.5281/zenodo.3995087
title: Jfreechart dataset

description: Datasets and analysis script for the article "Can Refactorings Indicate Design Tradeoffs?" submitted to SCAM 2020, NIER under double-blind review and provided as-is.
DOI: 10.6084/m9.figshare.9114860
title: Effect of the drying process on the volatile compounds and sensory quality of agglomerated instant coffee

description: The drying processing of agglomerated instant coffee can change the quality of the product due to the production of volatile compounds associated with the undesirable cereal aroma. Using fractional factorial planning, this study aimed to understand how the processing parameters (burner temperature, BT; steam pressure, SP; process air flow, AF; and fluidized hot bed section, LT) influenced the volatile profiles. The BT, AF, and the interaction of these variables (BT*AF) have significant influence (<i>p</i> The agglomeration process of coffee affects the volatile compoundsBurner temperature and process air flow significantly interfere in the cereal aroma of coffeeThe usage of intermediate parameters in the agglomeration process reduces the cereal aroma The agglomeration process of coffee affects the volatile compounds Burner temperature and process air flow significantly interfere in the cereal aroma of coffee The usage of intermediate parameters in the agglomeration process reduces the cereal aroma
DOI: 10.6084/m9.figshare.9114860.v1
title: Effect of the drying process on the volatile compounds and sensory quality of agglomerated instant coffee

description: The drying processing of agglomerated instant coffee can change the quality of the product due to the production of volatile compounds associated with the undesirable cereal aroma. Using fractional factorial planning, this study aimed to understand how the processing parameters (burner temperature, BT; steam pressure, SP; process air flow, AF; and fluidized hot bed section, LT) influenced the volatile profiles. The BT, AF, and the interaction of these variables (BT*AF) have significant influence (<i>p</i> The agglomeration process of coffee affects the volatile compoundsBurner temperature and process air flow significantly interfere in the cereal aroma of coffeeThe usage of intermediate parameters in the agglomeration process reduces the cereal aroma The agglomeration process of coffee affects the volatile compounds Burner temperature and process air flow significantly interfere in the cereal aroma of coffee The usage of intermediate parameters in the agglomeration process reduces the cereal aroma
DOI: 10.15468/xfs2py
title: A new rotifer species: Lecane langsenensis n. sp. (Rotifera: Monogononta) from Vietnam

description: This dataset contains the digitized treatments in Plazi based on the original journal article Trinh-Dang, Mau, Phan, Doan Dang, Vo, Van Minh (2019): A new rotifer species: Lecane langsenensis n. sp. (Rotifera: Monogononta) from Vietnam. Zootaxa 4615 (1): 155-164, DOI: https://doi.org/10.11646/zootaxa.4615.1.8
DOI: 10.15468/zgjzua
title: Cornigerius lacustris of Lake Hazar, Turkey, a synonym of Cornigerius maeoticus (Pengo) of the Ponto-Caspian (Cladocera: Onychopoda)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Dumont, Henri J., Vierstraete, Andy (2019): Cornigerius lacustris of Lake Hazar, Turkey, a synonym of Cornigerius maeoticus (Pengo) of the Ponto-Caspian (Cladocera: Onychopoda). Zootaxa 4619 (1): 177-183, DOI: https://doi.org/10.11646/zootaxa.4619.1.9
DOI: 10.5517/ccdc.csd.cc25kb58
title: CCDC 2012649: Experimental Crystal Structure Determination

description: Related Article: Timothy A. Ablott, Shane G. Telfer, Christopher Richardson|2020|CrystEngComm|22|5289|doi:10.1039/D0CE00930J
DOI: 10.5517/ccdc.csd.cc25kb69
title: CCDC 2012650: Experimental Crystal Structure Determination

description: Related Article: Timothy A. Ablott, Shane G. Telfer, Christopher Richardson|2020|CrystEngComm|22|5289|doi:10.1039/D0CE00930J
DOI: 10.15468/da5qgn
title: On the systematic status of the genus Oriocalotes Günther, 1864 (Squamata: Agamidae: Draconinae) with the description of a new species from Mizoram state, Northeast India

description: This dataset contains the digitized treatments in Plazi based on the original journal article Giri, Ad. B., Chaitanya, R., Mahony, Stephen, Lalrounga, Samuel, Lalrinchhana, C., Das, Abhijit, Sarkar, Vivek, Karanth, Praveen, Deepak, V. (2019): On the systematic status of the genus Oriocalotes Günther, 1864 (Squamata: Agamidae: Draconinae) with the description of a new species from Mizoram state, Northeast India. Zootaxa 4638 (4): 451-484, DOI: https://doi.org/10.11646/zootaxa.4638.4.1
DOI: 10.5517/ccdc.csd.cc21c8sh
title: CCDC 1887676: Experimental Crystal Structure Determination

description: Related Article: Yumi Yakiyama, Takahisa Fujinaka, Mio Nishimura, Ryotaro Seki, Hidehiro Sakurai|2020|Chem.Commun.|56|9687|doi:10.1039/D0CC03408H
DOI: 10.15468/w974z2
title: Perlodinella mazehaoi sp. nov., a new species of Perlodidae (Plecoptera) from Inner Mongolia of China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Chen, Zhi-Teng (2019): Perlodinella mazehaoi sp. nov., a new species of Perlodidae (Plecoptera) from Inner Mongolia of China. Zootaxa 4651 (2): 297-304, DOI: https://doi.org/10.11646/zootaxa.4651.2.6
DOI: 10.15468/q7az52
title: Genus-group names of Mutillidae (Hymenoptera): corrections and updates since 2008

description: This dataset contains the digitized treatments in Plazi based on the original journal article Brothers, Denis J., Lelej, Arkady S., Williams, Kevin A. (2019): Genus-group names of Mutillidae (Hymenoptera): corrections and updates since 2008. Zootaxa 4651 (3): 578-588, DOI: https://doi.org/10.11646/zootaxa.4651.3.10
DOI: 10.15468/ztnw64
title: Establishment of taxonomic status of Macrobrachium indicum Jayachandran & Joseph (Decapoda: Palaemonidae) through molecular characterization with a note on related species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Mary, Ajina S., Jayachandran, K. V., Landge, Asha T., Gladston, Y., Pavan-Kumar, A. (2019): Establishment of taxonomic status of Macrobrachium indicum Jayachandran & Joseph (Decapoda: Palaemonidae) through molecular characterization with a note on related species. Zootaxa 4652 (1): 174-182, DOI: https://doi.org/10.11646/zootaxa.4652.1.11
DOI: 10.5281/zenodo.3995575
title: GEOS-Chem Code v11-01

description: This is the GEOS-Chem Code used in Silva et al. (Submitted), "Exploring the Constraints on Simulated Aerosol Sources and Transport across the North Atlantic with Island-Based Sun Photometers"
DOI: 10.5281/zenodo.3995574
title: GEOS-Chem Code v11-01

description: This is the GEOS-Chem Code used in Silva et al. (Submitted), "Exploring the Constraints on Simulated Aerosol Sources and Transport across the North Atlantic with Island-Based Sun Photometers"
DOI: 10.5281/zenodo.3994312
title: Porous carbon nanowire array for surface-enhanced Raman spectroscopy

description: Surface-enhanced Raman spectroscopy (SERS) is a powerful tool for vibrational spectroscopy as it provides several orders of magnitude higher sensitivity than inherently weak spontaneous Raman scattering by exciting localized surface plasmon resonance (LSPR) on metal substrates. However, SERS can be unreliable for biomedical use since it sacrifices reproducibility, uniformity, biocompatibility, and durability due to its strong dependence on “hot spots”, large photothermal heat generation, and easy oxidization. Here we demonstrate the design, fabrication, and use of a metal-free (i.e., LSPR-free), topologically tailored nanostructure composed of porous carbon nanowires in an array as a SERS substrate to overcome all these problems. Specifically, it offers not only high signal enhancement (~10<sup>6</sup>) due to its strong broadband charge-transfer resonance, but also extraordinarily high reproducibility due to the absence of hot spots, high durability due to no oxidization, and high compatibility to biomolecules due to its fluorescence quenching capability.
DOI: 10.5281/zenodo.3994311
title: Porous carbon nanowire array for surface-enhanced Raman spectroscopy

description: Surface-enhanced Raman spectroscopy (SERS) is a powerful tool for vibrational spectroscopy as it provides several orders of magnitude higher sensitivity than inherently weak spontaneous Raman scattering by exciting localized surface plasmon resonance (LSPR) on metal substrates. However, SERS can be unreliable for biomedical use since it sacrifices reproducibility, uniformity, biocompatibility, and durability due to its strong dependence on “hot spots”, large photothermal heat generation, and easy oxidization. Here we demonstrate the design, fabrication, and use of a metal-free (i.e., LSPR-free), topologically tailored nanostructure composed of porous carbon nanowires in an array as a SERS substrate to overcome all these problems. Specifically, it offers not only high signal enhancement (~10<sup>6</sup>) due to its strong broadband charge-transfer resonance, but also extraordinarily high reproducibility due to the absence of hot spots, high durability due to no oxidization, and high compatibility to biomolecules due to its fluorescence quenching capability.