cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.14054180
title: Data set: raw training trials for delay maintenance task from Cuttlefish exert self-control in a delay of gratification task

description: The ability to exert self-control varies within and across taxa. Some species can exert self-control for several seconds whereas others, such as large-brained vertebrates, can tolerate delays of up to several minutes. Advanced self-control has been linked to better performance in cognitive tasks and has been hypothesized to evolve in response to specific socio-ecological pressures. These pressures are difficult to uncouple because previously studied species face similar socio-ecological challenges. Here, we investigate self-control and learning performance in cuttlefish, an invertebrate that is thought to have evolved under partially different pressures to previously studied vertebrates. To test self-control, cuttlefish were presented with a delay maintenance task, which measures an individual's ability to forgo immediate gratification and sustain a delay for a better but delayed reward. Cuttlefish maintained delay durations for up to 50–130 s. To test learning performance, we used a reversal-learning task, whereby cuttlefish were required to learn to associate the reward with one of two stimuli and then subsequently learn to associate the reward with the alternative stimulus. Cuttlefish that delayed gratification for longer had better learning performance. Our results demonstrate that cuttlefish can tolerate delays to obtain the food of higher quality comparable to that of some large-brained vertebrates.
DOI: 10.6084/m9.figshare.13117607
title: Chemometric mapping of polychlorinated dibenzo-<i>p</i>-dioxin (PCDD) and dibenzofuran (PCDF) congeners from the Passaic River, NJ: Integrated application of RSIMCA, PVA, and t-SNE

description: Robust Independent Modelling of Class Analogy (RSIMCA) was applied to classify over 2,800 Passaic River sediment samples into seven groups or not assigned to any group after an initial screening of a 3,255 sample dataset. This multivariate statistical output was compressed from seven latent dimensions into two interpretable dimensions using t-Distributed Stochastic Neighbor Embedding (t-SNE) graphics. Polytopic Vector Analysis (PVA) was then used to identify distinct source end-members based on PCDD/F characteristics of the classified samples. Among several advantages, the integrated chemometrics approach 1) applies emerging data visualization tools in this “Big Data” era to retain the fidelity of high-dimensional data attributes of a chemical dataset spanning over two decades of sample collection; 2) employs a classification technique undisturbed by compositional outliers yet tracks those for subsequent investigations; 3) provides an intuitive reduced-dimensional data visualization map for the PVA mixing polytope solution; 4) fills a data gap in the contextual inventory of PCDD/F source dynamics in a complex river system; and 5) serves as a backdrop for further forensics investigations of the finer structure of less dominant point sources and potential upland source end-members in sediments. This tiered chemometrics strategy provides a strong weight-of-evidence approach to the interpretation of sediment data.
DOI: 10.6084/m9.figshare.13117607.v3
title: Chemometric mapping of polychlorinated dibenzo-<i>p</i>-dioxin (PCDD) and dibenzofuran (PCDF) congeners from the Passaic River, NJ: Integrated application of RSIMCA, PVA, and t-SNE

description: Robust Independent Modelling of Class Analogy (RSIMCA) was applied to classify over 2,800 Passaic River sediment samples into seven groups or not assigned to any group after an initial screening of a 3,255 sample dataset. This multivariate statistical output was compressed from seven latent dimensions into two interpretable dimensions using t-Distributed Stochastic Neighbor Embedding (t-SNE) graphics. Polytopic Vector Analysis (PVA) was then used to identify distinct source end-members based on PCDD/F characteristics of the classified samples. Among several advantages, the integrated chemometrics approach 1) applies emerging data visualization tools in this “Big Data” era to retain the fidelity of high-dimensional data attributes of a chemical dataset spanning over two decades of sample collection; 2) employs a classification technique undisturbed by compositional outliers yet tracks those for subsequent investigations; 3) provides an intuitive reduced-dimensional data visualization map for the PVA mixing polytope solution; 4) fills a data gap in the contextual inventory of PCDD/F source dynamics in a complex river system; and 5) serves as a backdrop for further forensics investigations of the finer structure of less dominant point sources and potential upland source end-members in sediments. This tiered chemometrics strategy provides a strong weight-of-evidence approach to the interpretation of sediment data.
DOI: 10.15468/pcjeer
title: A new species of genus Oxytauchira from India (Orthoptera: Acrididae)

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kumar, Hirdesh, Chandra, Kailash, Saini, Jagdish (2018): A new species of genus Oxytauchira from India (Orthoptera: Acrididae). Acta Entomologica Musei Nationalis Pragae 58 (2): 495-498, DOI: 10.2478/aemnp-2018-0037
DOI: 10.6084/m9.figshare.14054270
title: Table S4 from Socio-demographic, not environmental, risk factors explain fine-scale spatial patterns of diarrheal disease in Ifanadiana, rural Madagascar

description: Top model set for commune-level incidence analysis. Eight models fell within 2 AIC of the top model and were included in the average model for the commune-level incidence analysis. Covariates not included in a model are denoted with “NA”.
DOI: 10.6084/m9.figshare.14054270.v1
title: Table S4 from Socio-demographic, not environmental, risk factors explain fine-scale spatial patterns of diarrheal disease in Ifanadiana, rural Madagascar

description: Top model set for commune-level incidence analysis. Eight models fell within 2 AIC of the top model and were included in the average model for the commune-level incidence analysis. Covariates not included in a model are denoted with “NA”.
DOI: 10.6084/m9.figshare.14054279.v1
title: Table S3 from Socio-demographic, not environmental, risk factors explain fine-scale spatial patterns of diarrheal disease in Ifanadiana, rural Madagascar

description: Top model set for the individual risk analysis. Twenty-seven models fell within 2 AIC of the top model and were included in the average model for the cohort dataset analysis. Covariates not included in a model are denoted with “NA“.
DOI: 10.5281/zenodo.4548647
title: P-E parameters in the western South China Sea in 2018

description: P-E parameters are important in the estimation of primary production
DOI: 10.6084/m9.figshare.14054279
title: Table S3 from Socio-demographic, not environmental, risk factors explain fine-scale spatial patterns of diarrheal disease in Ifanadiana, rural Madagascar

description: Top model set for the individual risk analysis. Twenty-seven models fell within 2 AIC of the top model and were included in the average model for the cohort dataset analysis. Covariates not included in a model are denoted with “NA“.
DOI: 10.5281/zenodo.4274386
title: P-E parameters in the western South China Sea in 2018

description: P-E parameters are important in the estimation of primary production
DOI: 10.15129/578985d6-ff89-4be9-aa78-8710aeeac92d
title: Data for: " Gouy phase-matched angular and radial mode conversion in four-wave mixing"

description: This dataset consists of the raw data used to realise the figures associated with the paper "Gouy phase-matched angular and radial mode conversion in four-wave mixing". Data explained further in readme file with dataset.
DOI: 10.25646/8038
title: Tagesdaten-CSV aus dem DIVI-Intensivregister

description: Die Tagesdaten-CSV entspricht einem Auszug der Daten des DIVI-Intensivregisters. Die Datei enthält eine Aggregation der aktuellsten Meldungen pro Landkreis. Es werden die aktuell gemeldeten Anzahlen der COVID-19 Intensivfälle sowie die gemeldeten intensivmedizinischen Behandlungskapazitäten angezeigt. Die Tagesdaten-CSV liefert dabei ausschließlich einen Blick auf die Daten gemäß dem Stand des betrachteten Tages. Die Daten sind im situationsbedingten Kontext aufbereitet, damit sind verschiedene Tagesdaten-CSVs u.U. nicht direkt miteinander vergleichbar. Die aktuellsten Meldungen werden im gewählten Betrachtungszeitfenster über alle Meldebereiche und Standorte aufsummiert. Weitere Informationen sind zu finden unter https://www.intensivregister.de/#/faq
DOI: 10.6084/m9.figshare.14054306
title: Diabetis_Diagnosis_Normalized

description: Normalized data
DOI: 10.6084/m9.figshare.14054306.v1
title: Diabetis_Diagnosis_Normalized

description: Normalized data
DOI: 10.6084/m9.figshare.14054267
title: Supplementary Material for: Examining the Relationship between Social and School Environment and Children’s Caries Experience Using Primary and Secondary Data: A Cluster Analysis

description: Dental caries is still prevalent worldwide, even with advances in preventive and curative measures. The aim was to examine clustering patterns of socioeconomic and environmental characteristics of schools and their associations with caries experience of schoolchildren. An epidemiological survey with cross-sectional design was conducted in 2014/2015 and included 5,213 students (aged 2–11 years) from 38 public schools of Carapicuíba (SP, Brazil). Primary data consisted of dental examinations performed at schools by 6 calibrated examiners to evaluate caries experience (dmf/DMFT index). Secondary data were extracted from the last official Demographic Census (2010) and School Census (2014 and 2015) to assess the socioeconomic and environmental characteristics of the territorial units and infrastructure of each school, respectively. Cluster analysis and ANOVA were applied to identify schools with similar social and environmental aspects and children’s caries experience. A logistic regression model was used to ascertain the effects of cluster variables on the likelihood that participants have caries experience, controlling for the stage of dentition and sex. Two valid and reliable clusters were identified: cluster 1 (“advantaged group”), characterized by 33 schools with the highest percentages of children without caries experience and located in regions with better socioenvironmental indicators, and cluster 2 (“least advantaged group”), characterized by 5 schools with higher percentages of children with caries experience, lower percentages of households with sanitary sewer and water supply, higher residents/household ratio and higher percentages of families living with up to 1 minimum wage. An increase in the odds of having caries experience for each percent of houses with well water and families which live with up to 1 minimum wage was observed. By using primary and secondary data, the study draws attention to the relationship between socioeconomic and environmental indicators and caries experience, identifying least advantaged regions and helping to design strategic health plans for this target population.
DOI: 10.6084/m9.figshare.14054267.v1
title: Supplementary Material for: Examining the Relationship between Social and School Environment and Children’s Caries Experience Using Primary and Secondary Data: A Cluster Analysis

description: Dental caries is still prevalent worldwide, even with advances in preventive and curative measures. The aim was to examine clustering patterns of socioeconomic and environmental characteristics of schools and their associations with caries experience of schoolchildren. An epidemiological survey with cross-sectional design was conducted in 2014/2015 and included 5,213 students (aged 2–11 years) from 38 public schools of Carapicuíba (SP, Brazil). Primary data consisted of dental examinations performed at schools by 6 calibrated examiners to evaluate caries experience (dmf/DMFT index). Secondary data were extracted from the last official Demographic Census (2010) and School Census (2014 and 2015) to assess the socioeconomic and environmental characteristics of the territorial units and infrastructure of each school, respectively. Cluster analysis and ANOVA were applied to identify schools with similar social and environmental aspects and children’s caries experience. A logistic regression model was used to ascertain the effects of cluster variables on the likelihood that participants have caries experience, controlling for the stage of dentition and sex. Two valid and reliable clusters were identified: cluster 1 (“advantaged group”), characterized by 33 schools with the highest percentages of children without caries experience and located in regions with better socioenvironmental indicators, and cluster 2 (“least advantaged group”), characterized by 5 schools with higher percentages of children with caries experience, lower percentages of households with sanitary sewer and water supply, higher residents/household ratio and higher percentages of families living with up to 1 minimum wage. An increase in the odds of having caries experience for each percent of houses with well water and families which live with up to 1 minimum wage was observed. By using primary and secondary data, the study draws attention to the relationship between socioeconomic and environmental indicators and caries experience, identifying least advantaged regions and helping to design strategic health plans for this target population.
DOI: 10.15468/rcrc68
title: Larval chaetotaxy and morphometry of Oosternum costatum (Coleoptera: Hydrophilidae) including a discussion of larval characters with phylogenetic relevance

description: This dataset contains the digitized treatments in Plazi based on the original journal article Archangelsky, Miguel (2018): Larval chaetotaxy and morphometry of Oosternum costatum (Coleoptera: Hydrophilidae) including a discussion of larval characters with phylogenetic relevance. Acta Entomologica Musei Nationalis Pragae 58 (2): 499-511, DOI: 10.2478/aemnp-2018-0038
DOI: 10.15468/z2b96g
title: Selasia dembickyi sp. nov., the first member of Drilini (Coleoptera: Elateridae) from South East Asia, with the description of S. jenisi sp. nov. from Nepal

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kundrata, Robin, Sormova, Eliska (2018): Selasia dembickyi sp. nov., the first member of Drilini (Coleoptera: Elateridae) from South East Asia, with the description of S. jenisi sp. nov. from Nepal. Acta Entomologica Musei Nationalis Pragae 58 (2): 513-518, DOI: 10.2478/aemnp-2018-0039
DOI: 10.20351/29gd20170603
title: ABIDES-2 Cruise, RV García del Cid 

description: ABIDES-2 Cruise (29GD20170603) carried out on the Research Vessel García del Cid in 2017
DOI: 10.15468/ndzn43
title: The Unicorn exists! A remarkable new genus and species of Perilissini (Hymenoptera: Ichneumonidae) from South East Asia

description: This dataset contains the digitized treatments in Plazi based on the original journal article Reshchikov, Alexey, Achterberg, Cornelis Van (2018): The Unicorn exists! A remarkable new genus and species of Perilissini (Hymenoptera: Ichneumonidae) from South East Asia. Acta Entomologica Musei Nationalis Pragae 58 (2): 523-529, DOI: 10.2478/aemnp-2018-0041
DOI: 10.15468/4r5zsz
title: New minute Drilini species significantly extend the distributions of Lolosia and Microselasia (Coleoptera: Elateridae: Agrypninae) in tropical Africa

description: This dataset contains the digitized treatments in Plazi based on the original journal article Kundrata, Robin (2018): New minute Drilini species significantly extend the distributions of Lolosia and Microselasia (Coleoptera: Elateridae: Agrypninae) in tropical Africa. Acta Entomologica Musei Nationalis Pragae 58 (2): 531-538, DOI: 10.2478/aemnp-2018-0042
DOI: 10.5281/zenodo.4548725
title: Performance of conceptual framework elements for the retrieval of qualitative health literature: data

description: Data for each of the included studies
DOI: 10.5281/zenodo.4548724
title: Performance of conceptual framework elements for the retrieval of qualitative health literature: data

description: Data for each of the included studies
DOI: 10.6084/m9.figshare.13615397
title: Metadata record for the manuscript: OMO-1 reduces tumor progression and enhances cisplatin efficacy in a 4T1-based non c-MET addicted intraductal mouse model for triple-negative breast cancer

description: <b>Summary</b> This metadata record provides details of the data supporting the claims of the related manuscript: “OMO-1 reduces tumor progression and enhances cisplatin efficacy in a 4T1-based non c-MET addicted intraductal mouse model for triple-negative breast cancer ”. The related study investigated the therapeutic efficacy of OMO-1, a potent and selective c-MET inhibitor, in an immunocompetent intraductal mouse model for triple-negative breast cancer (TNBC). Type of data: Histology and immunohisto/cytochemistry, spreadsheets, western blot analysis Subject of data: 4T1 cell culture, BALB/c mice Sample size: 4 mice <b>Data access</b> The histology and immunohisto/cytochemistry, spreadsheets and western blot analysis data are not publicly available for the following reason: a patent application on OMO-1 in non c-MET addicted tumours is still pending. However, the data can be made available upon reasonable request to the corresponding author. A comprehensive list of the datafiles underlying each of the figures and supplementary figures in the related manuscript is shared together with this metadata record in the file ‘Steenbrugge_et_al_2021_data_underlying_figures.xlsx’. <b>Corresponding author(s) for this study</b> Jonas Steenbrugge, Laboratory of Biochemistry, Department of Pharmacology, Toxicology and Biochemistry, Faculty of Veterinary Medicine, Ghent University, Merelbeke, Belgium. e-mail: Jonas.Steenbrugge@ugent.be. <br> <b>Study approval </b> The Ethical Committee (EC) of the Faculty of Veterinary Medicine, Ghent University (EC 2018-37 and amendment EC 2018-65).
DOI: 10.6084/m9.figshare.13615397.v1
title: Metadata record for the manuscript: OMO-1 reduces tumor progression and enhances cisplatin efficacy in a 4T1-based non c-MET addicted intraductal mouse model for triple-negative breast cancer

description: <b>Summary</b> This metadata record provides details of the data supporting the claims of the related manuscript: “OMO-1 reduces tumor progression and enhances cisplatin efficacy in a 4T1-based non c-MET addicted intraductal mouse model for triple-negative breast cancer ”. The related study investigated the therapeutic efficacy of OMO-1, a potent and selective c-MET inhibitor, in an immunocompetent intraductal mouse model for triple-negative breast cancer (TNBC). Type of data: Histology and immunohisto/cytochemistry, spreadsheets, western blot analysis Subject of data: 4T1 cell culture, BALB/c mice Sample size: 4 mice <b>Data access</b> The histology and immunohisto/cytochemistry, spreadsheets and western blot analysis data are not publicly available for the following reason: a patent application on OMO-1 in non c-MET addicted tumours is still pending. However, the data can be made available upon reasonable request to the corresponding author. A comprehensive list of the datafiles underlying each of the figures and supplementary figures in the related manuscript is shared together with this metadata record in the file ‘Steenbrugge_et_al_2021_data_underlying_figures.xlsx’. <b>Corresponding author(s) for this study</b> Jonas Steenbrugge, Laboratory of Biochemistry, Department of Pharmacology, Toxicology and Biochemistry, Faculty of Veterinary Medicine, Ghent University, Merelbeke, Belgium. e-mail: Jonas.Steenbrugge@ugent.be. <br> <b>Study approval </b> The Ethical Committee (EC) of the Faculty of Veterinary Medicine, Ghent University (EC 2018-37 and amendment EC 2018-65).
DOI: 10.15468/aw4dms
title: A new species of the genus Nenasa (Hemiptera: Fulgoroidea: Caliscelidae) from mainland China

description: This dataset contains the digitized treatments in Plazi based on the original journal article Gnezdilov, Vladimir M. (2018): A new species of the genus Nenasa (Hemiptera: Fulgoroidea: Caliscelidae) from mainland China. Acta Entomologica Musei Nationalis Pragae 58 (2): 539-544, DOI: 10.2478/aemnp-2018-0043
DOI: 10.6084/m9.figshare.14054393
title: ESM 2 from Evolutionary versatility of the avian neck

description: Detailed specimen information and links to 3D model downloads
DOI: 10.6084/m9.figshare.14054393.v1
title: ESM 2 from Evolutionary versatility of the avian neck

description: Detailed specimen information and links to 3D model downloads
DOI: 10.6084/m9.figshare.14054363
title: Supplementary Material for: Involvement of Pattern Recognition Receptors in the Direct Influence of Bacterial Components and Standard Antiacne Compounds on Human Sebaceous Gland Cells

description: <b><i>Introduction:</i></b> Pattern recognition receptors are involved in innate and adaptive immunity by detecting microbial components. Bacteria have been accused to play a role in inflammatory acne. We investigated the potential involvement of Toll-like receptor (TLR)2, TLR4, TLR6, and CD14 in the direct influence of bacterial components and standard antiacne compounds on human sebocytes. <b><i>Methods:</i></b> mRNA and protein expression of TLR2, TLR4, TLR6, and CD14 in SZ95 sebocytes was evaluated by real-time qRT-PCR and immunocytochemistry. The effects of lipopolysaccharides (LPS) and lipoteichoic acid on TLR2, TLR4, and CD14 expression and of cytokine/chemokine secretion by 13-<i>cis</i>-retinoic acid, all-<i>trans</i>-retinoic acid, retinol, and hydrocortisone at the mRNA and protein levels were assessed by real-time qRT-PCR and ELISA and verified by cocultivation with neutralizing antibodies. <b><i>Results:</i></b> The constitutive expression of TLR2, TLR4, and CD14 in SZ95 sebocytes was augmented by exposure to LPS. Hydrocortisone induced TLR2, but markedly reduced TLR4 expression. 13-<i>cis</i>-retinoic acid and all-<i>trans</i>-retinoic acid regulated IL-6 release. LPS enhanced and hydrocortisone reduced cytokine and chemokine release. Anti-TLR4 and anti-CD14 mAb blocked LPS-induced IL-8 and IL-6 release. <b><i>Conclusions:</i></b> Microbial components use pattern recognition receptors to directly activate sebocytes to express a wide range of proinflammatory molecules and especially IL-8 and IL-6 in a TLR4- and CD14-specific manner. Retinoids, but mostly corticosteroids, also use this pathway to exhibit anti-inflammatory effects.