cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26986924
title: Additional file 4 of Plasmodium falciparum gametocytes display global chromatin remodelling during sexual differentiation

description: Additional file 4: Table S3. Comparison of heterochromatic loci with published data from Bunnik et al. 2018 [49] and Fraschka et al. 2018 [50].
DOI: 10.6084/m9.figshare.26986927
title: Additional file 5 of Plasmodium falciparum gametocytes display global chromatin remodelling during sexual differentiation

description: Additional file 5: Table S4. List of genes associated with different chromatin states upstream in female gametocytes and ring stage parasites including Gene Ontology analyses.
DOI: 10.6084/m9.figshare.26986918.v1
title: Additional file 2 of Plasmodium falciparum gametocytes display global chromatin remodelling during sexual differentiation

description: Additional file 2: Table S1. Overview over RNAseq and ChIPseq replicates generated in this study.
DOI: 10.6084/m9.figshare.26986921
title: Additional file 3 of Plasmodium falciparum gametocytes display global chromatin remodelling during sexual differentiation

description: Additional file 3: Table S2. RNAseq gene expression data (FPKM values) and gene clusters including GO analyses.
DOI: 10.6084/m9.figshare.26986924.v1
title: Additional file 4 of Plasmodium falciparum gametocytes display global chromatin remodelling during sexual differentiation

description: Additional file 4: Table S3. Comparison of heterochromatic loci with published data from Bunnik et al. 2018 [49] and Fraschka et al. 2018 [50].
DOI: 10.6084/m9.figshare.26986918
title: Additional file 2 of Plasmodium falciparum gametocytes display global chromatin remodelling during sexual differentiation

description: Additional file 2: Table S1. Overview over RNAseq and ChIPseq replicates generated in this study.
DOI: 10.6084/m9.figshare.26986921.v1
title: Additional file 3 of Plasmodium falciparum gametocytes display global chromatin remodelling during sexual differentiation

description: Additional file 3: Table S2. RNAseq gene expression data (FPKM values) and gene clusters including GO analyses.
DOI: 10.6084/m9.figshare.26986945.v1
title: Additional file 4 of Review and analysis of the overlapping threats of carbapenem and polymyxin resistant E. coli and Klebsiella in Africa

description: Additional file 4: Study data.
DOI: 10.6084/m9.figshare.26986906.v1
title: Additional file 7 of Identifying the most effective behavioural assays and predator cues for quantifying anti-predator responses in mammals: a systematic review

description: Additional file 7. Definition of equation functions.
DOI: 10.6084/m9.figshare.26986945
title: Additional file 4 of Review and analysis of the overlapping threats of carbapenem and polymyxin resistant E. coli and Klebsiella in Africa

description: Additional file 4: Study data.
DOI: 10.6084/m9.figshare.26986951
title: Additional file 2 of Asymmetric gene expression and cell-type-specific regulatory networks in the root of bread wheat revealed by single-cell multiomics analysis

description: Additional file 2: Table S1. The comparison of single-cell datasets generated from wheat and Arabidopsis root. Table S2. Top 100 of cluster-specific marker genes. Table S3. The expression of matrix of long noncoding RNAs for each cluster. Table S4. The expression of branch-dependent genes over the differentiated pseudo-time for epidermis/cortex and root hair. Table S5. The expression of branch-dependent genes over the differentiated pseudo-time for endodermis and epidermis/cortex. Table S6. Gene expression bias based on bulk RNA-seq of AK58 root. Table S9. GO enrichment of balance and unbanlance genes for each cluster. Table S10. Expression bias of marker genes in each cluster of AK58 root. Table S11. Hub genes of 185 regulons acrosss all clusters identified by SCENIC4 soft. Table S12. Hub genes of top5 regulons for each cluster analyzed by SCENIC4 soft. Table S13. The orthologous genes of wheat, rice and Arabidopsis thaliana. Table S14. Primers used for qPCR analysis and template synthesis for in situ RNA hybridization.
DOI: 10.6084/m9.figshare.26986951.v1
title: Additional file 2 of Asymmetric gene expression and cell-type-specific regulatory networks in the root of bread wheat revealed by single-cell multiomics analysis

description: Additional file 2: Table S1. The comparison of single-cell datasets generated from wheat and Arabidopsis root. Table S2. Top 100 of cluster-specific marker genes. Table S3. The expression of matrix of long noncoding RNAs for each cluster. Table S4. The expression of branch-dependent genes over the differentiated pseudo-time for epidermis/cortex and root hair. Table S5. The expression of branch-dependent genes over the differentiated pseudo-time for endodermis and epidermis/cortex. Table S6. Gene expression bias based on bulk RNA-seq of AK58 root. Table S9. GO enrichment of balance and unbanlance genes for each cluster. Table S10. Expression bias of marker genes in each cluster of AK58 root. Table S11. Hub genes of 185 regulons acrosss all clusters identified by SCENIC4 soft. Table S12. Hub genes of top5 regulons for each cluster analyzed by SCENIC4 soft. Table S13. The orthologous genes of wheat, rice and Arabidopsis thaliana. Table S14. Primers used for qPCR analysis and template synthesis for in situ RNA hybridization.
DOI: 10.6084/m9.figshare.26986954.v1
title: Additional file 3 of Asymmetric gene expression and cell-type-specific regulatory networks in the root of bread wheat revealed by single-cell multiomics analysis

description: Additional file 3. 3D UMAP scatterplot.
DOI: 10.6084/m9.figshare.26986960
title: Additional file 5 of Asymmetric gene expression and cell-type-specific regulatory networks in the root of bread wheat revealed by single-cell multiomics analysis

description: Additional file 5: Table S7. Cluster specific expression bias of balanced genes in bulk RNA-seq of AK58 root.
DOI: 10.6084/m9.figshare.26986960.v1
title: Additional file 5 of Asymmetric gene expression and cell-type-specific regulatory networks in the root of bread wheat revealed by single-cell multiomics analysis

description: Additional file 5: Table S7. Cluster specific expression bias of balanced genes in bulk RNA-seq of AK58 root.
DOI: 10.6084/m9.figshare.26986963
title: Additional file 6 of Asymmetric gene expression and cell-type-specific regulatory networks in the root of bread wheat revealed by single-cell multiomics analysis

description: Additional file 6: Table S8. Expression bias of expressed genes in each cluster of AK58 root.
DOI: 10.6084/m9.figshare.26986954
title: Additional file 3 of Asymmetric gene expression and cell-type-specific regulatory networks in the root of bread wheat revealed by single-cell multiomics analysis

description: Additional file 3. 3D UMAP scatterplot.
DOI: 10.6084/m9.figshare.26986963.v1
title: Additional file 6 of Asymmetric gene expression and cell-type-specific regulatory networks in the root of bread wheat revealed by single-cell multiomics analysis

description: Additional file 6: Table S8. Expression bias of expressed genes in each cluster of AK58 root.
DOI: 10.6084/m9.figshare.26986897
title: Additional file 4 of Identifying the most effective behavioural assays and predator cues for quantifying anti-predator responses in mammals: a systematic review

description: Additional file 4. Exclusion list (reasons for exclusions).
DOI: 10.6084/m9.figshare.26986972
title: Additional file 2 of Temporal tracking of microglial and monocyte single-cell transcriptomics in lethal flavivirus infection

description: Additional file 2. Single-cell RNA gene list and gene modules determined by Monocle3.
DOI: 10.6084/m9.figshare.26986972.v1
title: Additional file 2 of Temporal tracking of microglial and monocyte single-cell transcriptomics in lethal flavivirus infection

description: Additional file 2. Single-cell RNA gene list and gene modules determined by Monocle3.
DOI: 10.6084/m9.figshare.26986978
title: Additional file 4 of Temporal tracking of microglial and monocyte single-cell transcriptomics in lethal flavivirus infection

description: Additional file 4. Top markers per scRNA-seq cluster.
DOI: 10.6084/m9.figshare.26986978.v1
title: Additional file 4 of Temporal tracking of microglial and monocyte single-cell transcriptomics in lethal flavivirus infection

description: Additional file 4. Top markers per scRNA-seq cluster.
DOI: 10.6084/m9.figshare.26986981
title: Additional file 5 of Temporal tracking of microglial and monocyte single-cell transcriptomics in lethal flavivirus infection

description: Additional file 5. Top gene ontology processes associated with differentially- expressed genes.
DOI: 10.6084/m9.figshare.26986981.v1
title: Additional file 5 of Temporal tracking of microglial and monocyte single-cell transcriptomics in lethal flavivirus infection

description: Additional file 5. Top gene ontology processes associated with differentially- expressed genes.
DOI: 10.15468/dl.6seprj
title: Occurrence Download

description: A dataset containing 197 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 },
 "TaxonKey is Ficus ilicina (Sond.) Miq.",
 "Continent is Africa"
 ]
}

 The dataset includes 197 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011650-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26986987
title: Additional file 7 of Temporal tracking of microglial and monocyte single-cell transcriptomics in lethal flavivirus infection

description: Additional file 7. Genes up- and down-regulated by scRNA-seq microglia clusters.
DOI: 10.6084/m9.figshare.26986990
title: Additional file 8 of Temporal tracking of microglial and monocyte single-cell transcriptomics in lethal flavivirus infection

description: Additional file 8. Gene ontology processes associated with genes downregulated by microglia.
DOI: 10.6084/m9.figshare.26986993
title: Additional file 9 of Temporal tracking of microglial and monocyte single-cell transcriptomics in lethal flavivirus infection

description: Additional file 9. Gene ontology processes associated with genes upregulated by microglia.
DOI: 10.15468/dl.5pxwzj
title: Occurrence Download

description: A dataset containing 51118 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "GadmGid is BEL.3_1",
 "OccurrenceStatus is Present",
 "PublishingOrg is 28eb1a3f-1c15-4a95-931a-4af90ecb574d",
 "TaxonKey is one of (Squamata, Mammalia, Aves, Amphibia, Lepidoptera, Odonata, Hymenoptera, Coleoptera, Orthoptera)"
 ]
}

 The dataset includes 51118 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0011649-240906103802322/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.26986990.v1
title: Additional file 8 of Temporal tracking of microglial and monocyte single-cell transcriptomics in lethal flavivirus infection

description: Additional file 8. Gene ontology processes associated with genes downregulated by microglia.
DOI: 10.6084/m9.figshare.26986993.v1
title: Additional file 9 of Temporal tracking of microglial and monocyte single-cell transcriptomics in lethal flavivirus infection

description: Additional file 9. Gene ontology processes associated with genes upregulated by microglia.
DOI: 10.6084/m9.figshare.26986888.v1
title: Additional file 1 of Identifying the most effective behavioural assays and predator cues for quantifying anti-predator responses in mammals: a systematic review

description: Additional file 1. ROSES checklist.
DOI: 10.6084/m9.figshare.26987011.v1
title: Additional file 2 of Vertically stratified methane, nitrogen and sulphur cycling and coupling mechanisms in mangrove sediment microbiomes

description: Additional file 2: Dataset S1. Genomic information of high quality bins. Dataset S2. METABOLIC HMM hits in MAGs. Dataset S3. Desulfurivibrionaceae (KO6.bin.24) metabolism. "+" = gene present in the MAG. "Absent" = not present in the MAG. Dataset S4. Methanoperedens (KO6.bin.60) metabolism. "+" = gene present in the MAG. "Absent" = not present in the MAG.
DOI: 10.15468/dl.9amcrs
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Pachycephala teysmanni",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0090951-230530130749713/datasets/export for details.
DOI: 10.15468/dl.e322ee
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Caenolestes condorensis Albuja & Patterson, 1996",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004158-200613084148143/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.hv8tr4
title: Occurrence Download

description: A dataset containing 240 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Colombia",
 "Geometry POLYGON((-83.93005 1.82158,-68.17993 1.82158,-68.17993 14.02115,-83.93005 14.02115,-83.93005 1.82158))",
 "HasCoordinate is true",
 "TaxonKey is Psychotria micrantha Kunth",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 240 records from 20 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002630-180925134338326/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6p5b8t
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Rhytisma rhododendri Fr.",
 {
 "or" : [
 "Country is United States of America",
 "Country is Canada"
 ]
 },
 {
 "not" : {
 "DatasetKey" : [
 "is Global database of alien macrofungi"
 ]
 }
 }
 ]
}

 The dataset includes 2 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0127421-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.9qbzc9
title: Occurrence Download

description: A dataset containing 23 species occurrences available in GBIF matching the query:
{
 "DatasetKey" : [
 "is Mangroves of Vanuatu"
 ]
}

 The dataset includes 23 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070734-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.l3szr3
title: Occurrence Download

description: A dataset containing 386 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is Programa Integral de Protección de tortugas marinas. Temporadas 2007 a 2012",
 "TaxonKey is Caretta Rafinesque, 1814"
 ]
}

 The dataset includes 386 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0002630-190415153152247/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.esumf3
title: Occurrence Download

description: A dataset containing 834 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((72.6857 16.1058,75.3887 11.08595,76.35406 8.53741,77.43525 7.61067,78.05308 8.53741,78.01447 10.62258,76.70158 12.32161,74.38473 16.22165,72.6857 16.1058))",
 "OccurrenceStatus is Present",
 "TaxonKey is Ratufa indica (Erxleben, 1777)"
 ]
}

 The dataset includes 834 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0070733-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.z68n7a
title: Occurrence Download

description: A dataset containing 142 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Odontophorus columbianus",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 142 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077941-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ykq7fe
title: Occurrence Download

description: A dataset containing 97828 species occurrences available in GBIF matching the query:
{
 "and" : [
 "HasCoordinate is true",
 "TaxonKey is Plethodon cinereus (Green, 1818)",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 97828 records from 49 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0045604-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bx772p
title: Occurrence Download

description: A dataset containing 4352 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Odontophorus leucolaemus",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 4352 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077950-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j2bkux
title: Occurrence Download

description: A dataset containing 7 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Asteropontius brevioris Kim I.H., 2003"
 ]
}

 The dataset includes 7 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0113682-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.r28cac
title: Occurrence Download

description: A dataset containing 404252 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Setophaga fusca (Statius Müller, 1776)"
 ]
}

 The dataset includes 404252 records from 233 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0032633-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.v6s6f4
title: Occurrence Download

description: A dataset containing 6412 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Agrostis agrostiflora Janch. & H.Neumayer",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6412 records from 56 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026268-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.2xnebz
title: Occurrence Download

description: A dataset containing 11877 species occurrences available in GBIF matching the query:
{
 "and" : [
 "VerbatimScientificName is Odontophorus guttatus",
 "BasisOfRecord is one of (Machine Observation, Human Observation)",
 "Year 2011-2021",
 "HasCoordinate is true",
 "OccurrenceStatus is Present",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil, Living Specimen, Specimen, Material citation, Material sample)"
 ]
 }
 }
 ]
}

 The dataset includes 11877 records from 7 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077952-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.axj4h3
title: Occurrence Download

description: A dataset containing 136 species occurrences available in GBIF matching the query:
{
 "and" : [
 {
 "or" : [
 "Country is China",
 "Country is Hong Kong",
 "Country is Macao"
 ]
 },
 "TaxonKey is Manis pentadactyla Linnaeus, 1758"
 ]
}

 The dataset includes 136 records from 13 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061255-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.97n5zf
title: Occurrence Download

description: A dataset containing 8909 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Panthera leo (Linnaeus, 1758)"
 ]
}

 The dataset includes 8909 records from 155 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026269-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.ha8hry
title: Occurrence Download

description: A dataset containing 53 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Vicia menziesii Spreng."
 ]
}

 The dataset includes 53 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0030418-230810091245214/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.mna7x7
title: Occurrence Download

description: A dataset containing 34101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Country is Spain",
 "TaxonKey is Lagomorpha"
 ]
}

 The dataset includes 34101 records from 15 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061263-200221144449610/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.j3xb2e
title: Occurrence Download

description: A dataset containing 48 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Impatiens amplexicaulis Edgew."
 ]
}

 The dataset includes 48 records from 14 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0026298-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.pnm9dt
title: Occurrence Download

description: A dataset containing 6 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Phyllopentas concinna (K.Schum.) Kårehed & B.Bremer"
 ]
}

 The dataset includes 6 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0077945-230530130749713/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.