cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.17632/4gxfr2bs5n.1
title: A New lanostane-type triterpenoid and a natural phenanthridine-6(5H)-one derivative from the stem bark of Anonidium mannii (Annonaceae)

description: The data consists of NMR data, mass spectrosmetric data and IR values. There are also tables summarising chemical shift values from NMR experiments of known compounds. The data was obtained by running analytical experiments on compounds isolated from plants extracts by chromatographic techniques. The NMR spectra shown in this work were process from FID data obtained from NMR instrument by using MestReNova 12.0 softwaret. Tables containing chemical shift values obtained from the NMR spectrum of known compounds.
The data was used to determine the structures of compounds described in the main article.
DOI: 10.17632/k7y2y2pxgv.1
title: The raw reads of mRNA-Seq following the embryonic development in medaka (Oryzias latipes)

description: The samples of total RNA were extracted from medaka fertilized eggs at 0, 1, 3, 5, 7 dpf (days post fertilization), and paired-end reads mRNA sequence was performed.
Medakas of these samples are Oryzias latipes and normal phenotype.
day0_1.fastq.gz and day0_2.fastq.gz are obtained from the 0 dpf sample, day1_1.fastq.gz and day1_2.fastq.gz are from 1 dpf sample, day3_1.fastq.gz and day3_2.fastq.gz are from 3 dpf sample, day5_1.fastq.gz and day5_2.fastq.gz are from 5 dpf sample and day7_1.fastq.gz and day7_2.fastq.gz are from 7 dpf sample.
DOI: 10.17632/sx4bk7tx5y.1
title: LDHU3_07.0690

description: 60S ribosomal protein L7a | eL8
Leishmania donovani (HU3 strain)
DOI: 10.17632/8p4vkw38y3.2
title: Data for JASP

description: Dataset of the study titled "Effect of learning to ski with an indoor skiing carpet compared to the real snow setting on alpine skiing technique, autotelic experience, and anxiety levels in university students. A pilot randomized controlled trial"
DOI: 10.17632/c8856zg4hj.1
title: Effects of the analysed variable set composition on the results of distance based morphometric surveys

description: Raw morphometric data of three freshwater fish species  (Gobio sp, Barbus petenyi, and Lepomis gibbosus)
DOI: 10.17632/ybgscx738x.1
title: LINF_220005000

description: CLN3 protein
Leishmania infantum (strain JPCM5)
DOI: 10.17632/3xjxwgztdd.1
title: Mixed Model assembly line balancing problems

description: This dataset presents seven Mixed-Model assembly line balancing problems. Each problem has a specific number of tasks and models.
DOI: 10.17632/z4p8d2j2rt.1
title: Soil Depth Map for Sri Lanka

description: Although harmonised profile data containing depth information are available, no attempt has been made to comprehensively map this important soil property across Sri Lanka. Hereby we provide the depth map resulting from the kriging map (OK), kriging variance map (OK_var) and random forest map (RFR).  
The resulting map can be used to provide essential information for environmental models that are sensitive to soils with variable depth.
DOI: 10.5281/zenodo.3906613
title: Replication Package for "Function-as-a-Service Performance Evaluation: A Multivocal Literature Review"

description: <strong>Paper</strong> J. Scheuner and P. Leitner, “Function-as-a-Service Performance Evaluation: A Multivocal Literature Review,” Accepted at the Journal of Systems and Software (JSS), Preprint: arXiv:2004.03276. Function-as-a-Service (FaaS) is one form of the serverless cloud computing paradigm and is defined through FaaS platforms (e.g., AWS Lambda) executing event-triggered code snippets (i.e., functions). Many studies that empirically evaluate the performance of such FaaS platforms have started to appear but we are currently lacking a comprehensive understanding of the overall domain. To address this gap, we conducted a multivocal literature review (MLR) covering 112 studies from academic (51) and grey (61) literature. We find that existing work mainly studies the AWS Lambda platform and focuses on micro-benchmarks using simple functions to measure CPU speed and FaaS platform overhead (i.e., container cold starts). Further, we discover a mismatch between academic and industrial sources on tested platform configurations, find that function triggers remain insufficiently studied, and identify HTTP API gateways and cloud storages as the most used external service integrations. Following existing guidelines on experimentation in cloud systems, we discover many flaws threatening the reproducibility of experiments presented in the surveyed studies. We conclude with a discussion of gaps in literature and highlight methodological suggestions that may serve to improve future FaaS performance evaluation studies. <pre>@article{scheuner:20-jss, author = {Joel Scheuner and Philipp Leitner}, title = {Function-as-a-Service Performance Evaluation: A Multivocal Literature Review}, journal = {J. Syst. Softw.}, volume = {170}, pages = {110708}, year = {2020}, doi = {10.1016/j.jss.2020.110708} }</pre> <strong>Dataset</strong> All extracted data originating from academic and grey literature studies are available as machine-readable CSV (./data/faas_mlr_raw.csv) and human-readable XLSX (./data/faas_mlr_raw.xlsx). The Excel file also contains all 700+ comments with guidance, decision rationales, and extra information. It is configured with a filtered view to display only <em>relevant</em> sources but contains the complete data (i.e., including discussion for sources considered to be <em>not relevant</em> in our context). Find further documentation in the README.md or on Github: https://github.com/joe4dev/faas-performance-mlr/ The latest version is also available online as an interactive Google spreadsheet (GSheet): https://docs.google.com/spreadsheets/d/1EK9yg9fMZIDybnbi7thsnBx1NdqDmkW86sMygH9r8q8
DOI: 10.5281/zenodo.3742208
title: Replication Package for "Function-as-a-Service Performance Evaluation: A Multivocal Literature Review"

description: <strong>Paper</strong> J. Scheuner and P. Leitner, “Function-as-a-Service Performance Evaluation: A Multivocal Literature Review,” Accepted at the Journal of Systems and Software (JSS), Preprint: arXiv:2004.03276. Function-as-a-Service (FaaS) is one form of the serverless cloud computing paradigm and is defined through FaaS platforms (e.g., AWS Lambda) executing event-triggered code snippets (i.e., functions). Many studies that empirically evaluate the performance of such FaaS platforms have started to appear but we are currently lacking a comprehensive understanding of the overall domain. To address this gap, we conducted a multivocal literature review (MLR) covering 112 studies from academic (51) and grey (61) literature. We find that existing work mainly studies the AWS Lambda platform and focuses on micro-benchmarks using simple functions to measure CPU speed and FaaS platform overhead (i.e., container cold starts). Further, we discover a mismatch between academic and industrial sources on tested platform configurations, find that function triggers remain insufficiently studied, and identify HTTP API gateways and cloud storages as the most used external service integrations. Following existing guidelines on experimentation in cloud systems, we discover many flaws threatening the reproducibility of experiments presented in the surveyed studies. We conclude with a discussion of gaps in literature and highlight methodological suggestions that may serve to improve future FaaS performance evaluation studies. <pre>@article{scheuner:20-jss, author = {Joel Scheuner and Philipp Leitner}, title = {Function-as-a-Service Performance Evaluation: A Multivocal Literature Review}, journal = {J. Syst. Softw.}, volume = {170}, pages = {110708}, year = {2020}, doi = {10.1016/j.jss.2020.110708} }</pre> <strong>Dataset</strong> All extracted data originating from academic and grey literature studies are available as machine-readable CSV (./data/faas_mlr_raw.csv) and human-readable XLSX (./data/faas_mlr_raw.xlsx). The Excel file also contains all 700+ comments with guidance, decision rationales, and extra information. It is configured with a filtered view to display only <em>relevant</em> sources but contains the complete data (i.e., including discussion for sources considered to be <em>not relevant</em> in our context). Find further documentation in the README.md or on Github: https://github.com/joe4dev/faas-performance-mlr/ The latest version is also available online as an interactive Google spreadsheet (GSheet): https://docs.google.com/spreadsheets/d/1EK9yg9fMZIDybnbi7thsnBx1NdqDmkW86sMygH9r8q8
DOI: 10.17632/3xs5c99wmh.1
title: Investigation of the Performance of Mock-Target IR Thermography for Indoor Air Temperature Measurements under Transient Conditions

description: This work aims to investigate the response of the methodology of Mock Target IR Thermography (Fokaides et al., 2016) to conditions of transient variation of indoor air temperature. For this purpose, measurement under lab conditions and numerical analysis with the use of finite element modelling (FEM) was applied. Specifically, measurements were implemented to examine the behaviour of air temperature, under thermal transient conditions, in the environmental chamber of the Kaunas University of Technology (KTU). The investigation concerned the use of different means of air heating (underfloor heating, radiator heating, ventilation heating) under controlled conditions. Validated numerical models were developed using FEM, with the aim to extend the scope of the assessment under various conditions. It was concluded that the mock target IR Thermography applies accurately for the case of transient air temperature, as well as for different rates of temperature change, with an average temperature deviation of 0.4 [%] according to the measurements and 1.74 [%] based on the simulations.
DOI: 10.17632/zrxjrc7fgn.1
title: "Cu(II)-based DNA Labeling Identifies the Structural Link Between Activation and Termination in a Metalloregulator."

description: EPR DEER, CW-EPR, MD simulation, and UV/Vis raw and processed data pertaining to the article "Cu(II)-based DNA Labeling Identifies the Structural Link Between Activation and Termination in a Metalloregulator" in press by ChemSci. DOI: 10.1039/D1SC06563G.
DOI: 10.6084/m9.figshare.17912222
title: Ferlins_Domain_models_final.zip

description: RoseTTAFold models of the C2 domains from the six human ferlin proteins.
DOI: 10.6084/m9.figshare.17912222.v1
title: Ferlins_Domain_models_final.zip

description: RoseTTAFold models of the C2 domains from the six human ferlin proteins.
DOI: 10.6084/m9.figshare.14698977
title: Machine Learning Assisted Screening of Two-Dimensional Materials for Water Desalination

description: ML_desalination_data_MD: This dataset contains the Molecular Dynamics simulation data for 2D materials used for desalination, collected from 16 journals.<br><br>
DOI: 10.17632/ztdpjdkx6p.1
title: Data from: Serum testosterone levels in three-month-old boys predict  their semen quality as young adults

description: This data repository contains the Supplemental Material from the manuscript entitled "Serum testosterone levels in three-month-old boys predict their semen quality as young adults".
DOI: 10.17632/3rmh27h4y5.2
title: Statistical learning in children and adults: Evidence from behavioural and neural entrainment data

description: The following data was used to assess statistical learning (SL) to six minutes of an artificial language in 8- to 12-year-old children and adults. We used explicit and implicit behavioural measures and an EEG measure of neural entrainment. EEG data were recorded while participants listened to the six-minute artificial language. Behavioural data was gathered immediately after exposure to the language. A two-alternative forced choice task and a rating task were used to assess explicit learning. A target detection task was used to assess implicit syllable prediction. Children (n = 56) completed all three behavioural tasks, whereas adults (n = 40) completed the rating task and target detection task. EEG data was gathered for 55 children and 24 adult participants. With few exceptions, children and adults showed largely similar performance on the behavioural explicit and implicit tasks, replicating prior work. Children and adults also demonstrated robust neural entrainment to both words and syllables, with a similar time course of word-level entrainment, reflecting learning of the hidden word structure.

The data included here is the raw data, before preprocessing.
DOI: 10.17632/6r7fv6tybf.1
title: Increase of O3 during COVID-20220118

description: Increase of O3 during COVID-20220118
DOI: 10.17632/r4prx82j9x.1
title: Comparison of 'liquid effect' in 3CaO·SiO2 based cement powder materials—a multimethod research 

description: 'Comparison of 'liquid effect' in 3CaO·SiO2 based cement powder materials—a multimethod research'-entitled MS Excel file includes the dataset of the study corresponding 'setting time', 'pH', and 'Quantitive X-Ray microanalysis' tests.
DOI: 10.17632/z7dm5w7hyz.1
title: Optimisation of long-term production schedule in open-pit mining considering long-term stockpiles and ore processing capacity expansions

description: Data input for the case study presented in "Optimisation of long-term production schedule in open-pit mining considering long-term stockpiles and ore processing capacity expansions".
DOI: 10.17632/23rm873z27.1
title: (JAAD Submission) Dermatology residents combined oral contraceptive pill prescribing practices, supplemental data

description: Combined oral contraceptive pills (COCs) are a safe and effective FDA approved adjunct therapy for females with acne vulgaris. However, data is lacking assessing U.S. dermatology residents’ use of COCs. Our cross-sectional survey study of dermatology residents aimed to identify prescribing practices, knowledge, and comfort level utilizing COCs for treatment of acne vulgaris. The Institutional Review Board of Penn State/ Hershey Medical Center approved the study protocol. An anonymous survey was emailed to ACGME approved U.S. dermatology residency program coordinators and directors to forward to their residents. Responses were analyzed with descriptive statistics highlighting areas for improvement. Stored here is supplemental data including demographics and knowledge of medication interactions.
DOI: 10.17632/7xh7msw7s5.2
title: Project Apollo Program Obligations

description: This data set presents a detailed, annual accounting of NASA's cost obligations for Project Apollo and its major components between 1960 and 1973. According to this reconstruction, the United States spent $25.8 billion on the hardware, facilities, and overhead directly associated with Project Apollo, which agrees with the official estimate provided to Congress within 1.5%.
DOI: 10.17632/rrb9289jbw.1
title: Improving Culture Initiation of Mature Oak Shoots Through Use of Silver Thiosulfate

description: In an effort to improve ex situ conservation strategies, we investigated the effect that silver thiosulfate (STS) would have on the survival of cultured mature oak shoots. Fresh shoots were collected from mature individuals of five different oak species and cultured onto medium with and without STS. What we found was that overall there was a significant increase in the survival rate of shoots cultured onto medium containing STS compared to shoots cultured on the control medium.
DOI: 10.17632/3822wj7zzz.1
title: LINF_220005800

description: DnaJ domain-containing protein | JDP66 | J66
Leishmania infantum (strain JPCM5)
DOI: 10.17632/zggxtxcg32.1
title: LINF_220005500

description: protein of unknown function - conserved
Leishmania infantum (strain JPCM5)
DOI: 10.17632/kndyrv2rpr.1
title: Multi-color super-resolution imaging to study human coronavirus RNA during cellular infection. Wang et al

description: The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the third human coronavirus within 20 years that gave rise to a life-threatening disease and the first to reach pandemic spread. To make therapeutic headway against current and future coronaviruses, the biology of coronavirus RNA during infection must be precisely understood. Here, we present a robust and generalizable framework combining high-throughput confocal and super-resolution microscopy imaging to study coronavirus infection at the nanoscale. Employing the model human coronavirus HCoV-229E, we specifically labeled coronavirus genomic RNA (gRNA) and double-stranded RNA (dsRNA) via multicolor RNA-immunoFISH and visualized their localization patterns within the cell. The exquisite resolution of our approach uncovers a striking spatial organization of gRNA and dsRNA into three distinct structures and enables quantitative characterization of the status of the infection after antiviral drug treatment. Our approach provides a comprehensive framework that supports investigations of coronavirus fundamental biology and therapeutic effects.
DOI: 10.17632/6wft2twxhp.1
title: μ-Raman spectroscopy 

description: .xlsx files relative to all analysed spots within foliated serpentinite DON6
DOI: 10.17632/w297t54m98.1
title: The association between gut peptides and markers of obesity and insulin resistance in lean and obese individuals in the United Arab Emirates

description: Objective: To compare fasting gut peptides levels between obese and non-obese emirati adults and investigate possible associations of these hormones with markers of obesity and insulin resistance.  
Methods: This cross-sectional study included 43 obese (body mass index (BMI): 43.12±6.83; mean age, 29.95±9.13 years) and 31 age- and sex-matched lean subjects (BMI: 22.49±1.93; mean age 29.67±10.73 years). BMI, waist circumference (WC), waist-to-height ratio (WHtR), percentage body fat (PBF), fasting blood levels of GLP-1, GLP-2, insulin, leptin, ghrelin, CCK, PYY), blood sugar (FBS), and Homeostatic model assessment-insulin resistance (HOMA-IR) were assessed. Associations between gut peptides and indices of obesity and IR were tested using Independents-samples t-test, Mann-Whitney-U, partial correlation, and logistic regression. 
Results: FBS, insulin, HOMA-IR, GLP-1, GLP2, and Leptin were significantly higher in the obese group (p<0.05), whereas ghrelin and CCK were significantly higher in lean participants (p<0.05). No between-group significant differences were noted regarding PYY. Controlling for BMI, GLP-1 was correlated with WHtR (r=0.312, p=0.039), and WC among females only (r=0.447, p<0.001). Insulin was positively correlated with WHtR (r=0.275, p=0.019), while, ghrelin was inversely correlated with WHtR (r=-0.302, p=0.019). GLP-1 and GLP-2 were correlated with insulin (r=0.612, p<0.001; r=0.236, p=0.046, respectively). GLP-1 was moderately correlated with HOMA-IR (r=0.667, p<0.001). None of the gut peptides was correlated with FBS. PYY was not correlated with any marker. In the regression, GLP-1 was positively associated with obesity, WC, WHtR, and  HOMA-IR (ExpB:1.367, 95%CI: 1.117-1.672; ExpB: 1.196, 95%CI: 1.001-1.430; ExpB: 1.591, 95%CI: 1.072-2.363; ExpB: 1.221, 95%CI: 1.079-1.382; respectively), and negatively associated with PBF (ExpB: 0.717, 95%CI: 0.542-0.949). Leptin was also positively associated with obesity (ExpB: 1.239, 95%CI: 1.018-1.508). 
Conclusions: Obese and lean adults displayed significant differences in plasma gut peptides levels. GLP-1 levels was independently associated with markers of obesity and IR. Restoring the disordered gut hormone balance in obesity may represent a major potential therapeutic target.
DOI: 10.15468/ef3j7a
title: Red List of Fungi

description: The analysis of information on the diversity of protected regions of filamentous fungi was carried out, the most frequently found species in the lists of red book species were identified. The analysis was carried out on the basis of the development of a specialized database "Red List of Fungi" as part of the VKM collection databases.
DOI: 10.17632/ghz3t6g5kw.1
title: Hydrochemical Profile of Pariyej Community Reservoir (PCR), Gujarat, India: A Multivariate Statistical Approach using Multidimensional Scaling

description: The present study was undertaken at Pariyej Community Reservoir (PCR), Gujarat, India; a freshwater inland wetland of national importance; listed in Asian Directory of Wetlands. The aim of this biannual research was to monitor the seasonal alterations in hydrochemical characteristics along the six monthly gradients (April to September, 2021; Summer, Monsoon, Post-Monsoon) at three (PCR-1, 2, 3) pre-fixed transactional stations of PCR. The surface water quality of freshwater inland wetland was assessed using 21 hydrochemical parameters e.g. physical variables (Temperature, EC, TS, TSS, TDS, Turbidity), chemical variables (pH, DO, Acidity, Free CO2, PA, TA, Carbonates, Bicarbonates, Chloride, Total Hardness, Ca Hardness, Mg Hardness, and nutrients variables (Sulphate, Phosphate, Nitrate). The surface water of PCR-1 exhibited accentuated amount of TDS, pH, Phosphate and Sulphate; PCR-2 with TS, TSS, DO, Acidity and Free CO2, and PCR-3 with Temperature, EC, Turbidity, TA, Bicarbonates, Chloride, Total Hardness, Ca Hardness,  Mg Hardness and Sulphate. Principal Component Analysis (PCA) revealed positive loading between EC (0.759), TS (3.276), TSS (2.244), TDS (0.452) and Total Hardness (0.114) in PCR-1; PCR-2 with EC (1.006), TS (0.739), TDS (3.141), TA (0.020), Bicarbonates (0.020), Total Hardness (0.599), Ca Hardness (0.167) and  Mg Hardness (0.166), and PCR-3 with EC (3.229), Acidity (0.383), TA (0.395), Bicarbonates (0.395), Chloride (0.329), Total Hardness (1.483) and Ca Hardness (1.131). Among them, significant gradient was found in TS (3.276), TSS (2.244) at PCR-1, EC (1.006), TDS (3.141) at PCR-2, and EC (3.229), Total Hardness (1.483) and Ca Hardness (1.131) at PCR-3. In addition, univariate analysis revealed the peak pollution load at PCR-2 (161.96), followed by moderate pollution load at PCR-3 (157.03) and the lowest pollution load was observed at PCR-1 (150.45). Moreover, the outcomes of the present study revealed that hydrochemical variables were more fluctuated at PCR-2 (290.63), followed by modest variation of physico-chemical constituents at PCR-1 (260.02) and the minimal oscillation of surface water elements at PCR-3 (259.15). The above fallouts might be due to prolific, lush and uncontrolled growth of aquatic vegetation e.g. Typha angustata at PCR-2, profuse span of Nelumbo nucifera and meager subsistence of Phragmitis australis at PCR-3. The findings of the present study signifies the importance of PCR as a freshwater inland wetland of national importance in terms of sustainability and sanctity of surface water quality as it provides incessant water supply to around 800 villages of the Main Saurashtra Land. This baseline study on wetland monitoring, hydrological regimes, aquatic pollution and environmental sustainability will be helpful to ecologists, environmentalists and biologists to conserve, protect and manage the prevailing freshwater wetland ecosystems of Gujarat, India.
DOI: 10.17632/6gsrdyv48d.1
title: Woodrum Setser et al. Development and utilization of an isolation box test to characterize personality traits of dairy calves

description: Raw data used in statistical analysis as described in the manuscript.
DOI: 10.17632/v2nsjsf22w.1
title: A Tutorial on the GMM Method  (Um tutorial sobre o método GMM)

description: Our paper can be used as a guide for those interested in learning about the GMM method with applications in Finance. These files can be used by readers who wish to follow the tutorial using the same data as the authors. 
1) Before using the files with the datasets and the code, have a look at the readme file for further instructions.
2)  file GMM_CKLS.R  is based on the paper by Chan, Karolyi, Longstaff and Sanders (1992) and applies the GMM method to estimate the parameters of the SDE that describes the behavior of short-term continuous interest rates.
3) file GMM_CCAPM.R applies the GMM method on data comprised of 10 portfolios built according to the market value of shares traded on NYSE
4) files Data_CCAPM and Data_CKLS contain the dataset that needs to be uploaded with the code.