cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15156/bio/sh0191986.10fu
title: SH0191986.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0191987.10fu
title: SH0191987.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0191988.10fu
title: SH0191988.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0191989.10fu
title: SH0191989.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0191990.10fu
title: SH0191990.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15156/bio/sh0191991.10fu
title: SH0191991.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.ya7g9u
title: Occurrence Download

description: A dataset containing 10 species occurrences available in GBIF matching the query:
{"type":"and","predicates":[{"type":"within","geometry":"POLYGON ((78.050678 20.276569, 77.97580600000001 20.270993, 77.902793 20.254403, 77.833451 20.227211, 77.769499 20.190091, 77.712518 20.143965, 77.66391299999999 20.089975, 77.62487900000001 20.029457, 77.59636999999999 19.963909, 77.579076 19.89495, 77.573408 19.82428, 77.579492 19.753641, 77.597162 19.68477, 77.62597 19.619361, 77.66519599999999 19.559018, 77.713866 19.505222, 77.770781 19.459289, 77.834542 19.422344, 77.903586 19.395291, 77.976223 19.37879, 78.050678 19.373244, 78.12513300000001 19.37879, 78.19777000000001 19.395291, 78.266814 19.422344, 78.330575 19.459289, 78.38749 19.505222, 78.43616 19.559018, 78.475386 19.619361, 78.504194 19.68477, 78.52186399999999 19.753641, 78.52794799999999 19.82428, 78.52227999999999 19.89495, 78.504986 19.963909, 78.476477 20.029457, 78.437443 20.089975, 78.38883800000001 20.143965, 78.331857 20.190091, 78.267905 20.227211, 78.19856299999999 20.254403, 78.12555 20.270993, 78.050678 20.276569))"},{"type":"equals","key":"CLASS_KEY","value":"212","matchCase":false},{"type":"greaterThanOrEquals","key":"YEAR","value":"2015","matchCase":false},{"type":"not","predicate":{"type":"in","key":"BASIS_OF_RECORD","values":["MATERIAL_CITATION","MATERIAL_SAMPLE","PRESERVED_SPECIMEN"],"matchCase":false}},{"type":"lessThanOrEquals","key":"COORDINATE_UNCERTAINTY_IN_METERS","value":"10000","matchCase":false},{"type":"equals","key":"LICENSE","value":"CC BY 4.0","matchCase":false}]}

 The dataset includes 10 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0001972-260108223611665/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15156/bio/sh0191992.10fu
title: SH0191992.10FU

description: UNITE provides a unified way for delimiting, identifying, communicating, and working with DNA-based Species Hypotheses (SH). All fungal ITS sequences in the international nucleotide sequence databases are clustered to approximately the species level by applying a set of dynamic distance values (<0.5 - 3.0%). All species hypotheses are given a unique, stable name in the form of a DOI, and their taxonomic and ecological annotations are verified through distributed, web-based third-party annotation efforts. SHs are connected to a taxon name and its classification as far as possible (phylum, class, order, etc.) by taking into account identifications for all sequences in the SH. An automatically or manually designated sequence is chosen to represent each such SH. These sequences are released (https://unite.ut.ee/repository.php) for use by the scientific community in, for example, local sequence similarity searches and next-generation sequencing analysis pipelines. The system and the data are updated automatically as the number of public fungal ITS sequences grows.
DOI: 10.15468/dl.rvxzaq
title: Occurrence Download

description: A dataset containing 26 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Oenothera ×latipetala (Soldano) Soldano)",
 "BasisOfRecord is one of (Specimen, Human Observation, Observation, Living Specimen, Machine Observation, Literature Occurrence)",
 "Geometry POLYGON((-180 -90,180 -90,180 90,-180 90,-180 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1945"
 ]
}

 The dataset includes 26 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0016593-250402121839773/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/vw5mgc
title: Two new species of Landouria Godwin-Austen, 1918 (Gastropoda, Camaenidae) from Thailand, with a key to Thai species

description: This dataset contains the digitized treatments in Plazi based on the original journal article Nahok, Benchawan, Chanlabut, Utain, Tumpeesuwan, Sakboworn, Tumpeesuwan, Chanidaporn (2024): Two new species of Landouria Godwin-Austen, 1918 (Gastropoda, Camaenidae) from Thailand, with a key to Thai species. ZooKeys 1208: 347-362, DOI: 10.3897/zookeys.1208.117056AbstractThe present work contains descriptions of two new species of Landouria and a key to Thai species of this genus. Landouria bella sp. nov. is described from isolated limestone hills in Ratchaburi and Phetchaburi provinces, western Thailand. This new species is characterized by its small depressed-globose shell without a peripheral keel, the presence of a small, thin lamella on the columellar side of the inner aperture, a long, cylindrical distally bent flagellum, a short penis with a rounded verge, and a short, thick free oviduct and vagina. The second new species, Landouria monodon sp. nov. is described from sandstone hills in Kalasin Province, northeastern Thailand. This species has a depressed-conic shell with a blunt peripheral keel, a thick prominent lamella on the columellar side of the inner aperture, a short, finger-shaped, distally bent flagellum, and a long penis with a small, short verge.
DOI: 10.15468/ef6fsm
title: Flora Helvetica - Woodsiaceae

description: This dataset contains the digitized treatments in Plazi based on the original book chapter Konrad Lauber, Gerhart Wagner, Andreas Gygax (2018): Flora Helvetica - Woodsiaceae. In: Flora Helvetica. Bern: Haupt Verlag: 86-88, ISBN: 978-3-258-08047-5
DOI: 10.6084/m9.figshare.26580728.v1
title: Additional file 3 of MeJA-mediated enhancement of salt-tolerance of Populus wutunensis by 5-aminolevulinic acid

description: Supplementary Material 3
DOI: 10.6084/m9.figshare.26626681
title: Additional file 1 of Identification of a Seed Vigor–Related QTL Cluster Associated with Weed Competitive Ability in Direct–Seeded Rice (Oryza Sativa L.)

description: Supplementary Table S1 Polymorphic markers information used to develop CSSLs.
DOI: 10.6084/m9.figshare.26626681.v1
title: Additional file 1 of Identification of a Seed Vigor–Related QTL Cluster Associated with Weed Competitive Ability in Direct–Seeded Rice (Oryza Sativa L.)

description: Supplementary Table S1 Polymorphic markers information used to develop CSSLs.
DOI: 10.6084/m9.figshare.26734701
title: Additional file 1 of Conjoint analysis of physio-biochemical, transcriptomic, and metabolomic reveals the response characteristics of solanum nigrum L. to cadmium stress

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26734701.v1
title: Additional file 1 of Conjoint analysis of physio-biochemical, transcriptomic, and metabolomic reveals the response characteristics of solanum nigrum L. to cadmium stress

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26734710
title: Additional file 1 of Rubber plantations are impermeable to an avian understory specialist in Sri Lanka

description: Supplementary Material 1: Appendix 1, a database with raw data from all observed individuals.
DOI: 10.6084/m9.figshare.26734710.v1
title: Additional file 1 of Rubber plantations are impermeable to an avian understory specialist in Sri Lanka

description: Supplementary Material 1: Appendix 1, a database with raw data from all observed individuals.
DOI: 10.6084/m9.figshare.26626810.v1
title: Additional file 5 of EGCG inhibits the inflammation and senescence inducing properties of MDA-MB-231 triple-negative breast cancer (TNBC) cells-derived extracellular vesicles in human adipose-derived mesenchymal stem cells

description: Additional file 5. Analysis of the 553 DEG and of the two major clusters identified.
DOI: 10.6084/m9.figshare.26580731
title: Additional file 4 of MeJA-mediated enhancement of salt-tolerance of Populus wutunensis by 5-aminolevulinic acid

description: Supplementary Material 4
DOI: 10.6084/m9.figshare.26580773.v1
title: Additional file 1 of Application of TraDIS to define the core essential genome of Campylobacter jejuni and Campylobacter coli

description: Additional file 1:  Table S1. Campylobacter species and strains tested for Tn mutagenesis.
DOI: 10.6084/m9.figshare.26580776
title: Additional file 2 of Application of TraDIS to define the core essential genome of Campylobacter jejuni and Campylobacter coli

description: Additional file 2: Table S2. Customized sequencing primers. Nextera adapter i5 (underlined/green), Index (black), Read 1 sequencing primer (dashed line, brown), spacer (lowercase, black), binding site for transposon (bold underlined, purple).
DOI: 10.6084/m9.figshare.26580734.v1
title: Additional file 5 of MeJA-mediated enhancement of salt-tolerance of Populus wutunensis by 5-aminolevulinic acid

description: Supplementary Material 5
DOI: 10.15468/dl.gk5qn3
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((147.868689 -33.195687, 147.868689 -33.202424, 147.866443 -33.202424, 147.866443 -33.209162, 147.875426 -33.209162, 147.875426 -33.197933, 147.870934 -33.197933, 147.870934 -33.195687, 147.868689 -33.195687))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0068490-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26580797
title: Additional file 1 of Continuous monitoring of instrumental clock errors at 50 volcanoes in Japan based on seismic interferometry

description: Additional file 1: Table S1. Estimated clock errors for all stations. Fig. S1. (a) Topographic maps of Atosanupuri, Meakan, Taisetsuzan, Tokachi, Tarumae, Kuttara, Usu, Hokkaido-Komagatake, and Esan volcanoes. The red inverted triangles on the topographic maps represent seismic stations for which clock errors were detected. (b) Record sections of seismic ambient noise CCFs for those 9 volcanoes in the frequency band between 0.2 and 4 Hz. These CCFs were calculated by stacking daily CCFs during the study period. Note that the daily CCFs when clock errors occurred were discarded. Fig. S2. Similar to Fig. S1, but for Hakkoda, Towada, Iwakisan, Akitayakeyama, Mt. Iwate, Akitakomagatake, Chokaisan, Kurikomayama, and Zao volcanoes. Fig. S3. Similar to Fig. S1, but for Azuma, Adatara, Bandai, Nasu, Nikkoshirane, Kusatsu-Shirane, Asama, Mt. Fuji, and Hakone volcanoes. Fig. S4. Similar to Fig. S1, but for Izu-Tobu, Izu-Oshima, Niijima, Kozushima, Miyakejima, Hachijojima, Aogashima, and Ioto volcanoes. Fig. S5. Similar to Fig. S1, but for Niigatayakeyama, Midagahara, Yakedake, Norikuradake, Ontake, and Hakusan volcanoes. Fig. S6. Similar to Fig. S1, but for Tsurumidake, Kujyu, Aso, Unzen, Kirishima, Sakurajima, Satsumaiwo, Kuchinoerabu, and Suwanosejima volcanoes. Fig. S7. Temporal changes in SCCF (three-day-stacked CCF) waveforms for station pairs with clock errors (N.AMOV–V.ASMG, V.AMSO–V.ASMB, N.MKSV–V.MKJA, N.MKTV–V.MKJA, OK.KOM–OK.MHK, and V.MEAB–V.MEAA). Fig. S8. Similar to Fig. S7 but for N.GJKV–V.OSMA, N.ODKV–V.OSSN, N.OOHV–V.OSFT, N.OSMV–V.OSFT, V.KIRA–V.KIMH, and V2KTCM–V.KIKH. Fig. S9. Similar to Fig. S7 but for V.SKA2–V.SKRB, V.SKRC–V.SKRD, V.HKKF–V.HMA2, V.HKMA–V.HKTK, and N.ASIV–V2ASOE. Fig. S10. Temporal changes in clock errors (top) and those for differences in cAIC from two different models for line fitting (y=ax+b and y=ax) (bottom) for six stations.
DOI: 10.6084/m9.figshare.26580665
title: Additional file 2 of Sulfur, sterol and trehalose metabolism in the deep-sea hydrocarbon seep tubeworm Lamellibrachia luymesi

description: Additional file 2:  Table S1.
DOI: 10.6084/m9.figshare.26580671
title: Additional file 4 of Sulfur, sterol and trehalose metabolism in the deep-sea hydrocarbon seep tubeworm Lamellibrachia luymesi

description: Additional file 4:  Table S3.
DOI: 10.6084/m9.figshare.26580665.v1
title: Additional file 2 of Sulfur, sterol and trehalose metabolism in the deep-sea hydrocarbon seep tubeworm Lamellibrachia luymesi

description: Additional file 2:  Table S1.
DOI: 10.6084/m9.figshare.26580674
title: Additional file 5 of Sulfur, sterol and trehalose metabolism in the deep-sea hydrocarbon seep tubeworm Lamellibrachia luymesi

description: Additional file 5:  Table S4.
DOI: 10.6084/m9.figshare.26580800.v1
title: Additional file 1 of Trends in Neisseria meningitidis serogroups amongst patients with suspected cerebrospinal meningitis in the meningitis belt of Ghana: a 5-year retrospective study

description: Additional file 1.
DOI: 10.5518/194
title: Dataset associated with 'Infinite-period density-matrix model for terahertz-frequency quantum cascade lasers'

description: In this work we present a density matrix model which considers an infinite quantum cascade laser (QCL) and models transport via a nearest neighbor approximation. We will discuss derivation of output parameters of the model in detail and show the direct mathematical link to semi-classical rate equation approach. This model can be extended to an arbitrary number of states in the QCL period, without a priori specification of upper and lower lasing level. Application of the model to various QCL structures is possible, including bound-to-continuum structures which typically employ a large number of states per period. The model has been applied to a 2 THz bound-to-continuum QCL and a very good agreement with measured V-I characteristics is obtained along with qualitative agreement with measured L-I characteristics in terms of dynamic range. This archive contains the data associeted with the publication "Infinite-period density-matrix model for terahertz-frequency quantum cascade lasers" and refers to all data presented in 8 figures in the paper.
DOI: 10.6084/m9.figshare.26734791
title: Additional file 1 of Comprehensive bioinformatics analysis of human cytomegalovirus pathway genes in pan-cancer

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26734791.v1
title: Additional file 1 of Comprehensive bioinformatics analysis of human cytomegalovirus pathway genes in pan-cancer

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26734794
title: Additional file 2 of Comprehensive bioinformatics analysis of human cytomegalovirus pathway genes in pan-cancer

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26734794.v1
title: Additional file 2 of Comprehensive bioinformatics analysis of human cytomegalovirus pathway genes in pan-cancer

description: Supplementary Material 2
DOI: 10.6084/m9.figshare.26580683.v1
title: Additional file 1 of Whole genome sequencing of simmental cattle for SNP and CNV discovery

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26580779.v1
title: Additional file 3 of Application of TraDIS to define the core essential genome of Campylobacter jejuni and Campylobacter coli

description: Additional file 3: Table S3. This excel spreadsheet contains essential gene lists for C.jejuni strains (Sheet 1), C. coli strains (Sheet 2), C. hyointestinalis (Sheet3) and C. lari (Sheet 4)
DOI: 10.6084/m9.figshare.26580782
title: Additional file 4 of Application of TraDIS to define the core essential genome of Campylobacter jejuni and Campylobacter coli

description: Additional file 4: Table S4. Contains the output from Panaroo for C. jejuni, the filtered output, the output from Panaroo for C. coli, the filtered output and the core and essential gene list across C. jejuni and C. coli.
DOI: 10.6084/m9.figshare.26580782.v1
title: Additional file 4 of Application of TraDIS to define the core essential genome of Campylobacter jejuni and Campylobacter coli

description: Additional file 4: Table S4. Contains the output from Panaroo for C. jejuni, the filtered output, the output from Panaroo for C. coli, the filtered output and the core and essential gene list across C. jejuni and C. coli.
DOI: 10.6084/m9.figshare.26580728
title: Additional file 3 of MeJA-mediated enhancement of salt-tolerance of Populus wutunensis by 5-aminolevulinic acid

description: Supplementary Material 3