cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.26695632.v1
title: Additional file 6 of Abnormal levels of expression of microRNAs in peripheral blood of patients with traumatic brain injury are induced by microglial activation and correlated with severity of injury

description: Additional file 6: Table S1. Expression profiles of miRNAs in peripheral blood of patients with TBI before and after treatment.
DOI: 10.6084/m9.figshare.26695647.v1
title: Additional file 1 of Biochemical changes in lumbar facet joint and disc degeneration by T2* mapping

description: Supplementary Material 1
DOI: 10.6084/m9.figshare.26695647
title: Additional file 1 of Biochemical changes in lumbar facet joint and disc degeneration by T2* mapping

description: Supplementary Material 1
DOI: 10.5281/zenodo.13318635
title: Dataset: Insights into the Stabilization of Atmospheric Iron(II) by Water-Soluble Organic Matter: Role of Aliphatic Organosulfates
DOI: 10.5281/zenodo.13318636
title: Dataset: Insights into the Stabilization of Atmospheric Iron(II) by Water-Soluble Organic Matter: Role of Aliphatic Organosulfates
DOI: 10.15468/dl.hzyvhn
title: Occurrence Download

description: A dataset containing 0 species occurrences available in GBIF matching the query:
{
 "Geometry" : [
 "POLYGON ((148.573869 -32.820639, 148.573869 -32.82513, 148.576115 -32.82513, 148.576115 -32.820639, 148.573869 -32.820639))"
 ]
}

 The dataset includes 0 records from 0 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067702-240626123714530/datasets/export for details.
DOI: 10.6084/m9.figshare.26573923.v1
title: Additional file 7 of Development of a low-dose fipronil deer feed: evaluation of efficacy against two medically important tick species parasitizing white-tailed deer (Odocoileus virginianus) under pen conditions

description: Additional file 7. Table S3. Study schedule. Specific timing of acclimation, exposure, tick attachment, post-attachment, capsule checks and tissue collection are presented for each deer.
DOI: 10.6084/m9.figshare.26625070
title: Data and R script (Predicted community consequences of spatially explicit global change-induced processes on plant-insect networks)

description: The R script and simulated data that can be used to reproduced the analyses and figures in the manuscript entitled "Predicted community consequences of spatially explicit global change-induced processes on plant-insect networks". Instruction is in the R script.
DOI: 10.6084/m9.figshare.26625070.v1
title: Data and R script (Predicted community consequences of spatially explicit global change-induced processes on plant-insect networks)

description: The R script and simulated data that can be used to reproduced the analyses and figures in the manuscript entitled "Predicted community consequences of spatially explicit global change-induced processes on plant-insect networks". Instruction is in the R script.
DOI: 10.6084/m9.figshare.26695686
title: Additional file 1 of Quantitative proteomic analysis of HER2 protein expression in PDAC tumors

description: Additional file 1: Table S1. Demographic and clinical characteristics of the patients. Table S2. The HER2Total, pHER2Y1248, and pHER3Y1289 abundances quantified by RPPA are reported as categorical values of 0, 1, 2, and 3, as well as normalized percentile values ranging from 0-100% relative to the reference population standards. The IHC-based characterizations of HER2Total are reported as quartile-based categorical values of 0, 1, 2, and 3, per standard clinical scoring, for which an IHC score of 3+ or 2+/FISH-positive is clinically defined as HER2-positive. Clinical IHC-based HER2Total testing was not performed for all tumors; those tumors without IHC data are reported as “Not evaluated”. Table S3. Spearman correlations were calculated between the HER2Total and pHER2Y1248 abundances quantified by RPPA each for PDAC and breast cancer tumors, and between the HER2Total abundances quantified by RPPA and standard clinical IHC staining each for PDAC and breast cancer tumors. ND = not done (IHC staining not performed).
DOI: 10.6084/m9.figshare.26695686.v1
title: Additional file 1 of Quantitative proteomic analysis of HER2 protein expression in PDAC tumors

description: Additional file 1: Table S1. Demographic and clinical characteristics of the patients. Table S2. The HER2Total, pHER2Y1248, and pHER3Y1289 abundances quantified by RPPA are reported as categorical values of 0, 1, 2, and 3, as well as normalized percentile values ranging from 0-100% relative to the reference population standards. The IHC-based characterizations of HER2Total are reported as quartile-based categorical values of 0, 1, 2, and 3, per standard clinical scoring, for which an IHC score of 3+ or 2+/FISH-positive is clinically defined as HER2-positive. Clinical IHC-based HER2Total testing was not performed for all tumors; those tumors without IHC data are reported as “Not evaluated”. Table S3. Spearman correlations were calculated between the HER2Total and pHER2Y1248 abundances quantified by RPPA each for PDAC and breast cancer tumors, and between the HER2Total abundances quantified by RPPA and standard clinical IHC staining each for PDAC and breast cancer tumors. ND = not done (IHC staining not performed).
DOI: 10.15468/dl.mec5xy
title: Occurrence Download

description: A dataset containing 490 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((44.93098 13.86635,67.20916 13.86635,67.20916 31.53663,44.93098 31.53663,44.93098 13.86635))",
 "TaxonKey is Asteroidea"
 ]
}

 The dataset includes 490 records from 21 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021781-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zz5xe2
title: Occurrence Download

description: A dataset containing 2925 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Helix aspersa O.F.Müller, 1774"
 ]
}

 The dataset includes 2925 records from 123 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021783-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.34740/kaggle/dsv/10705688
title: Delhivery DataSet
DOI: 10.3886/e218701
title: Sandy PMO: Disaster Relief Appropriations Act of 2013 (Sandy Supplemental Bill) Financial Data, FEMA

description: The Sandy Supplemental Quarterly Financial Datasets are provided by the Sandy Program Management Office (PMO) to enhance transparency for the public on the status of the Disaster Relief Appropriations Act of 2013 or the Sandy Supplemental bill from the 19 federal agencies funded. The Disaster Relief Appropriations Act of 2013, or Sandy Supplemental bill, provided more than $49 billion to 19 federal agencies to help communities rebuild after Sandy.<br><br>In addition, the Act included funding for disasters occurring in 2011, 2012, and 2013. Since the law’s passage, the Sandy PMO has worked across the 19 agencies to track the progress of their funds and how they are assisting families and small businesses on the ground.<br><br>More detailed descriptions of the federal programs funded through the Sandy Supplemental can be accessed on the HUD Federal Partners page.
DOI: 10.3886/e218701v1
title: Sandy PMO: Disaster Relief Appropriations Act of 2013 (Sandy Supplemental Bill) Financial Data, FEMA

description: The Sandy Supplemental Quarterly Financial Datasets are provided by the Sandy Program Management Office (PMO) to enhance transparency for the public on the status of the Disaster Relief Appropriations Act of 2013 or the Sandy Supplemental bill from the 19 federal agencies funded. The Disaster Relief Appropriations Act of 2013, or Sandy Supplemental bill, provided more than $49 billion to 19 federal agencies to help communities rebuild after Sandy.<br><br>In addition, the Act included funding for disasters occurring in 2011, 2012, and 2013. Since the law’s passage, the Sandy PMO has worked across the 19 agencies to track the progress of their funds and how they are assisting families and small businesses on the ground.<br><br>More detailed descriptions of the federal programs funded through the Sandy Supplemental can be accessed on the HUD Federal Partners page.
DOI: 10.15468/dl.d58nqk
title: Occurrence Download

description: A dataset containing 54023 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tortrix viridana (Linnaeus, 1758))",
 "OccurrenceStatus is one of (Present)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 },
 "Year is greater than or equal to 1957"
 ]
}

 The dataset includes 54023 records from 354 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021784-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.k5qdm4
title: Occurrence Download

description: A dataset listing the 624 species recorded in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Occurrence evidence, Living Specimen, Fossil, Specimen, Material citation, Human Observation, Machine Observation, Observation, Material sample)",
 "Country is Colombia",
 "DatasetKey is one of (Flora de las Reservas Distritales de Humedal de Bogotá, D.C., Rasgos funcionales de especies del arbolado urbano presentes en Bogotá en relación con diferentes tipos de emplazamiento asociados a superficies impermeables, Vegetación espontánea presente en seis microhábitats asociados a una Alameda en el occidente de la ciudad de Bogotá, Seguimiento a la Fauna presente en las Actividades de Mantenimiento realizadas entre la Empresa de Acueducto y Alcantarillado de Bogotá ESP y Aguas de Bogotá SA ESP en los Parques Ecológicos Distritales de Humedal, Bogotá D.C., Aves de los Parques Ecológicos Distritales Humedales Bogotá, D.C., EOD – eBird Observation Dataset, Mediciones dasométricas en el arbolado urbano de las localidades de la Medialuna del Sur en Bogotá D.C., Aves de la cuenca media del río Bogotá, Artropofauna de las Reservas Distritales de Humedal de Bogotá, D.C., iNaturalist Research-grade Observations)",
 "Geometry POLYGON((-74.1907 4.6646,-74.19522 4.65533,-74.18772 4.6269,-74.17015 4.62385,-74.15164 4.62647,-74.14123 4.65227,-74.147 4.66401,-74.14845 4.66606,-74.16093 4.67153,-74.1907 4.6646))",
 "HasCoordinate is true",
 "OccurrenceStatus is Present"
 ]
}

 The dataset's 624 records were derived from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021782-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.21227/wt3b-d228
title: Impedance Pneumography and Diaphragm Surface Electromyography

description: Objective: This study evaluates the feasibility of a noninvasive system for monitoring diaphragmatic efficiency in people with cervical spinal cord injury (CSCI). Methods: Two versions of a portable hardware system were developed using impedance pneumography (IP) to measure tidal volume (TV) and surface electromyography (sEMG) to assess diaphragm electrical activity (EAdi). Version 1 was used to determine optimal electrode positions, while Version 2 integrated these sensor systems into a compact, portable design. Data from eight healthy male participants were analyzed to assess the correlation and accuracy of TV and respiration rate (RR) prediction using IP and the correlation between sEMG signals and maximum inspiratory pressure (MIP). Results: For IP, measurements between the upper sternum and the midclavicular line (MCL) at the 4th intercostal (IC) space showed the highest correlation with true tidal volume. For sEMG, measurements between the mid-sternum and the 6th IC space demonstrated the strongest correlation with MIP. The integrated version 2 hardware demonstrates simultaneous IP and sEMG measurement while dissipating 2.17 mW. Discussion/Conclusion: The proposed system and the results presented can pave the way to a practical, cost-effective solution for continuous diaphragmatic efficiency monitoring, and thus enabling home-based respiratory care of CSCI patients.
DOI: 10.15468/dl.4j53pp
title: Occurrence Download

description: A dataset containing 6486 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((44.93098 13.86635,67.20916 13.86635,67.20916 31.53663,44.93098 31.53663,44.93098 13.86635))",
 "TaxonKey is Decapoda"
 ]
}

 The dataset includes 6486 records from 53 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021786-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.28378514
title: <b>Framing the European Green Deal: Political and media energy discourses in Czechia and Sweden</b>

description: The European Green Deal (EGD) has become a key reform process in the European Union with a major impact on energy reforms in the Member States (MS). At the national level, the discourse around EGD and the Fit for 55 package plays a crucial role in shaping perceptions and potentially influencing behaviour. While scholars have examined particularly the EU discourse on the EGD, this paper focuses on Czechia and Sweden, two MS with contrasting attitudes towards renewable energy deployment and climate protection. Using the methodological framework of the Discourse-Historical Approach, the comparative analysis examines how EGD is framed within political and media discourses in these countries during the first phase of reform implementation (2019-2022). The main findings suggest that despite contextual differences, EGD appears to be universally accepted and shows resilience even in the midst of external and internal changes. Notably, although the argumentative strategies differ, the overarching acceptance of EGD remains consistent.
DOI: 10.15468/dl.m3buvn
title: Occurrence Download

description: A dataset containing 57039 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Tortrix viridana (Linnaeus, 1758), Catocala nymphagoga Esper, 1787)",
 "OccurrenceStatus is one of (Present)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 {
 "not" : {
 "BasisOfRecord" : [
 "is one of (Fossil)"
 ]
 }
 },
 "Year is greater than or equal to 1957"
 ]
}

 The dataset includes 57039 records from 396 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0021787-250127130748423/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.5281/zenodo.10206490
title: Earth.Org.UK (EOU) public data snapshot

description: Snapshot of public data file set from EOU including energy and IoT data.

NOTE: there are some third-party data and other files present which may not be covered by CC0: these should be called out in local README files and similar.
DOI: 10.5281/zenodo.10515137
title: Earth.Org.UK (EOU) public data snapshot

description: Snapshot of public data file set from EOU including energy and IoT data.

NOTE: there are some third-party data and other files present which may not be covered by CC0: these should be called out in local README files and similar.
DOI: 10.5281/zenodo.11440365
title: Earth.Org.UK (EOU) public data snapshot

description: Snapshot of public data file set from EOU including energy and IoT data.

NOTE: there are some third-party data and other files present which may not be covered by CC0: these should be called out in local README files and similar.
DOI: 10.5281/zenodo.14062396
title: Earth.Org.UK (EOU) public data snapshot

description: Snapshot of public data file set from EOU including energy and IoT data.

NOTE: there are some third-party data and other files present which may not be covered by CC0: these should be called out in local README files and similar.
DOI: 10.5281/zenodo.13124662
title: Pléiades Digital Elevation Models of South Lhonak Lake (Sikkim, India)

description: Data and methods

On 3 October 2023, the collapse of a frozen lateral moraine into South Lhonak Lake triggered a multi-hazard cascade in the Sikkim Himalaya, India (Sattar et al, 2025). This repository contains two DEMs derived from Pléiades satellite images that were acquired before and after the event. 



A post-event DEM computed from a pair of PHR1A stereoscopic images acquired on 2023-10-29 (20231029.tif)

A pre-event DEM computed from a triplet of PHR1A stereoscopic images acquired on 2022-10-18 (20221018.tif)


The DEMs (height above the WGS84 ellipsoid) were posted at 1.0 m with UTM 45N projection (EPSG:32645) and coregistered to the GLO30 Copernicus DEM. They were computed with the MicMac software in the DSM-OPT service using the following configuration: correlation window size: 3x3, regularization factor: 0.05, vertical uncertainty: 0.1, potential accuracy threshold: 0.4 (Rupnik et al. 2017).

These DEMs allow the analysis of topographic changes in the lake area. We included examples of such analysis with the addition of the High Mountain Asia 8 m DEM (Shean 2017).

Acknowledgements 

Pléiades images were acquired and processed thanks to the CIEST2 service developed and performed with the French Space Agency (CNES) by FormaTerre, Solid Earth component of the Data Terra Research Infrastructure.

References



Sattar et al. (2025) The Sikkim flood of October 2023: Drivers, causes and impacts of a multihazard cascade. Science, eads2659, https://doi.org/10.1126/science.ads2659
Rupnik, E., Daakir, M., & Pierrot Deseilligny, M. (2017). MicMac–a free, open-source solution for photogrammetry. Open geospatial data, software and standards, 2, 1-9. https://doi.org/10.1186/s40965-017-0027-2

 

Shean, D. (2017). High Mountain Asia 8-meter DEM Mosaics Derived from Optical Imagery, Version 1 [Data Set]. Boulder, Colorado USA. NASA National Snow and Ice Data Center Distributed Active Archive Center. https://doi.org/10.5067/KXOVQ9L172S2. Date Accessed 07-29-2024.
DOI: 10.5281/zenodo.13124661
title: Pléiades Digital Elevation Models of South Lhonak Lake (Sikkim, India)

description: Data and methods

On 3 October 2023, the collapse of a frozen lateral moraine into South Lhonak Lake triggered a multi-hazard cascade in the Sikkim Himalaya, India (Sattar et al, 2025). This repository contains two DEMs derived from Pléiades satellite images that were acquired before and after the event. 



A post-event DEM computed from a pair of PHR1A stereoscopic images acquired on 2023-10-29 (20231029.tif)

A pre-event DEM computed from a triplet of PHR1A stereoscopic images acquired on 2022-10-18 (20221018.tif)


The DEMs (height above the WGS84 ellipsoid) were posted at 1.0 m with UTM 45N projection (EPSG:32645) and coregistered to the GLO30 Copernicus DEM. They were computed with the MicMac software in the DSM-OPT service using the following configuration: correlation window size: 3x3, regularization factor: 0.05, vertical uncertainty: 0.1, potential accuracy threshold: 0.4 (Rupnik et al. 2017).

These DEMs allow the analysis of topographic changes in the lake area. We included examples of such analysis with the addition of the High Mountain Asia 8 m DEM (Shean 2017).

Acknowledgements 

Pléiades images were acquired and processed thanks to the CIEST2 service developed and performed with the French Space Agency (CNES) by FormaTerre, Solid Earth component of the Data Terra Research Infrastructure.

References



Sattar et al. (2025) The Sikkim flood of October 2023: Drivers, causes and impacts of a multihazard cascade. Science, eads2659, https://doi.org/10.1126/science.ads2659
Rupnik, E., Daakir, M., & Pierrot Deseilligny, M. (2017). MicMac–a free, open-source solution for photogrammetry. Open geospatial data, software and standards, 2, 1-9. https://doi.org/10.1186/s40965-017-0027-2

 

Shean, D. (2017). High Mountain Asia 8-meter DEM Mosaics Derived from Optical Imagery, Version 1 [Data Set]. Boulder, Colorado USA. NASA National Snow and Ice Data Center Distributed Active Archive Center. https://doi.org/10.5067/KXOVQ9L172S2. Date Accessed 07-29-2024.
DOI: 10.5281/zenodo.11526061
title: The Sampling Threat when Mining Generalizable Inter-Library Usage Patterns

description: Tool support in software engineering often relies on relationships, regularities, patterns, or rules mined from other users’ code. Examples include approaches to bug prediction, code recommendation, and code autocompletion. Mining is typically performed on samples of code rather than the entirety of available software projects. While sampling is crucial for scaling data analysis, it might influence the generalization of the mined patterns. This paper focuses on sampling software projects filtered for specific libraries and frameworks, and on mining patterns that connect different libraries. We call these inter-library patterns.

We observe that limiting the sample to a specific library may hinder the generalization of inter-library patterns, posing a threat to their use or interpretation. Using a simulation and a real case study, we demonstrate this threat for different sampling methods. Our simulation shows that only when sampling for the disjunction of both libraries involved in the implication of a pattern, the implication generalizes well. Additionally, we demonstrate that real empirical data sampled using the GitHub search API does not behave as expected from our simulation. This identifies a potential threat relevant for many studies that use the GitHub search API for studying inter-library patterns.
DOI: 10.5281/zenodo.11526062
title: The Sampling Problem when Mining Inter-Library Usage Patterns

description: Tool support in software engineering often depends on relationships, regularities, patterns, or rules, mined from sampled code. Examples are approaches to bug prediction, code recommendation, and code autocompletion. Samples are relevant to scale the analysis of data. Many such samples consist of software projects taken from GitHub; however, the specifics of sampling might influence the generalization of the patterns. 

In this paper, we focus on how to sample software projects that are clients of libraries and frameworks, when mining for interlibrary usage patterns. We notice that when limiting the sample to a very specific library, inter-library patterns in the form of implications from one library to another may not generalize well. Using a simulation and a real case study, we analyze different sampling methods. Most importantly, our simulation shows that only when sampling for the disjunction of both libraries involved in the implication, the implication generalizes well. Second, we show that real empirical data sampled from GitHub does not behave as we would expect it from our simulation. This identifies a potential problem with the usage of such API for studying inter-library usage patterns.