cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.e9fuqx
title: Occurrence Download

description: A dataset containing 75 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Nepeta heliotropifolia Lam."
 ]
}

 The dataset includes 75 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061794-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.t234bd
title: Occurrence Download

description: A dataset containing 45 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Notobubon sonderi (M.Hiroe) Magee"
 ]
}

 The dataset includes 45 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061795-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.6dxqjt
title: Occurrence Download

description: A dataset containing 18334118 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is Chinese Taipei",
 "OccurrenceStatus is Present"
 ]
}

 The dataset includes 18334118 records from 1581 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0061769-240321170329656/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.6084/m9.figshare.24174627.v1
title: Supplementary Material for: Endoscopic extraction of two giant stone bezoars using mechanical and laser lithotripsy.

description: Not required
DOI: 10.5281/zenodo.8391054
title: Annoying noise: effect of anthropogenic underwater noise on the movement and feeding performance in the red cherry shrimp, Neocaridina davidi

description: <strong>Supplementary materials and statistical analysis</strong>
DOI: 10.5281/zenodo.8391396
title: Annoying noise: effect of anthropogenic underwater noise on the movement and feeding performance in the red cherry shrimp, Neocaridina davidi

description: <strong>Supplementary material and statistical analysis</strong>
DOI: 10.5281/zenodo.8391053
title: Annoying noise: effect of anthropogenic underwater noise on the movement and feeding performance in the red cherry shrimp, Neocaridina davidi

description: <strong>Supplementary material and statistical analysis</strong>
DOI: 10.5281/zenodo.8391465
title: Annoying noise: effect of anthropogenic underwater noise on the movement and feeding performance in the red cherry shrimp, Neocaridina davidi

description: <strong>Supplementary material and statistical analysis</strong>
DOI: 10.5519/qd.7yhdqjv9
title: Query on the Natural History Museum Data Portal (data.nhm.ac.uk) (14 records)
DOI: 10.6084/m9.figshare.24155157.v1
title: Supplementary Material for: Three-dimensional arterial spin labeling for the evaluation of the cerebral hemodynamics in ischemic and hemorrhagic Moyamoya disease

description: Introduction: Moyamoya disease (MMD) is a vascular disease with significant risk of mortality due to ischemia or hemorrhage in the brain. The goal of the study was to explore three-dimensional arterial spin labeling (3D-ASL) to improve evaluation of cerebral hemodynamics in patients with MMD. Methods: Our study included 54 cases of ischemic MMD and 42 cases of hemorrhagic MMD. Dynamic susceptibility contrast-enhanced perfusion weighted imaging (DSC-PWI) and 3D-ASL were performed at 3.0 T. Based on these scans, cerebral blood flow (CBF), mean transit time (MTT) and time to peak (TTP) were calculated and compared between patients with different disease subtypes. Receiver operating characteristics (ROC) analysis was used to assess the diagnostic sensitivity and specificity of different imaging procedures and parameters. Results: Our data suggested that CBF in the lesion area was more severely reduced in patients with hemorrhagic MMD than in those with ischemic MMD. The CBF parameter in 3D-ASL diagnosed hemorrhagic and ischemic MMD with a significant sensitivity and specificity of 80.59% and 57.41% respectively, with an area under the curve (AUC) of 0.75. We also found that the relative CBF (rCBF) of 3D-ASL was more pronounced decreased and the relative MTT and TTP of DSC-PWI were significantly increased in patients with hemorrhagic MMD than those with ischemic MMD. Specificity and sensitivity, and AUC of 3D-ASL were better than the comparison of absolute values from DSC-PWI scans. Discussion/Conclusion: Our study indicated that 3D-ASL is powerful in differentiating patients with cerebral ischemic or hemorrhagic MMD, providing another diagnostic tool that could potentially improve precision medicine to monitoring MMD patients.
DOI: 10.6084/m9.figshare.24205305.v1
title: Supplementary Material for: Miliary tuberculosis during R-MPV therapy in an elderly patient with primary central nerve system lymphoma: a case report

description: Most elderly patients with tuberculosis (TB) have previously been infected with Mycobacterium tuberculosis, which remains dormant in the body for decades and may reactivate when their immunity declines due to underlying diseases. Elderly cancer patients are at a high risk for TB, and the treatment of TB reactivation in these patients is challenging. Among cancer patients, the incidence of TB reactivation is the highest in lymphoma patients. However, the impact of chemotherapy on TB reactivation in lymphoma patients is unknown. We report the case of an immunocompetent elderly patient with primary central nervous system lymphoma (PCNSL) having no prior history of TB, who developed miliary TB during multiagent chemotherapy consisting of rituximab, high-dose methotrexate, procarbazine, and vincristine (R-MPV therapy). Retrospectively, the chest CT showed calcification of the pleura, suggesting that the patient had a latent tuberculosis infection (LTBI) and developed miliary TB from the reactivation of TB triggered by the R-MPV therapy. Our case emphasizes that when chemotherapy is administered to patients with PCNSL, interferon-gamma release assay (IGRA) should be performed if there are findings on chest examination suggestive of LTBI, such as pleural calcification, and if IGRA is positive, chemotherapy should be given concurrently with LTBI treatment.
DOI: 10.6084/m9.figshare.23936310.v1
title: Supplementary Material for: Comparison of isolated lymphocyte and whole blood based CBMN assays for radiation triage.

description: Following a mass-casualty nuclear/radiological event, there will be an important need for rapid and accurate estimation of absorbed dose for biological triage. The cytokinesis-block micronucleus (CBMN) assay is an established and validated cytogenetic biomarker used to assess DNA damage in irradiated peripheral blood lymphocytes. Here, we describe an intercomparison experiment between two biodosimetry laboratories, located at Columbia University (CU) and Health Canada (HC) that performed different variants of the human blood CBMN assay to reconstruct dose in human blood, with CU performing the assay on isolated lymphocytes and using semi-automated scoring whereas HC used the more conventional whole blood assay. Although the micronucleus yields varied significantly between the two assays, the predicted doses closely matched up to 4 Gy – the range from which the HC calibration curve was previously established. These results highlight the importance of a robust calibration curve(s) across a wide age range that match the exposure scenario as closely as possible and that will account for differences in methodology between laboratories. We have seen that at low doses, variability in the results may be attributed to variation in the processing whilst at higher doses the variation is dominated by inter-individual variation in cell proliferation. This inter-laboratory collaboration further highlights the usefulness of the CBMN endpoint to accurately reconstruct absorbed dose in human blood after ionizing radiation exposure.
DOI: 10.6084/m9.figshare.23646405
title: Raw data and R code for article: "A novel perspective on the evolutionary loss of plasma-accessible carbonic anhydrase at the teleost gill"

description: Raw data and R code for article: "A novel perspective on the evolutionary loss of plasma-accessible carbonic anhydrase at the teleost gill"Contents:Compressed data files for closed-system experimentsCompressed data files for open-system experiments including blood parametersR code for closed-system data analysisR code for open-system data analysisR code for blood parameter data analysis
DOI: 10.6084/m9.figshare.23646405.v1
title: Raw data and R code for article: "A novel perspective on the evolutionary loss of plasma-accessible carbonic anhydrase at the teleost gill"

description: Raw data and R code for article: "A novel perspective on the evolutionary loss of plasma-accessible carbonic anhydrase at the teleost gill"Contents:Compressed data files for closed-system experimentsCompressed data files for open-system experiments including blood parametersR code for closed-system data analysisR code for open-system data analysisR code for blood parameter data analysis
DOI: 10.6084/m9.figshare.23565945.v1
title: Supplementary Material for: The Relationship Between Metabolic Comorbidities and Post-surgical Weight Loss Outcomes in Adolescents Undergoing Laparoscopic Sleeve Gastrectomy

description: Background: Little is known about the relationship between metabolic factors and weight loss success in adolescents undergoing bariatric surgery. Methods: The objective of this study was to assess if baseline metabolic characteristics associate with weight loss in adolescents undergoing laparoscopic sleeve gastrectomy. A retrospective study was conducted in a comprehensive adolescent bariatric surgery center of 151 subjects (34 male, 117 female). Anthropometric measurements and metabolic factors including blood pressure, fasting glucose, HbA1c, Metabolic Syndrome (MeS), liver function, triglycerides, and waist circumference were collected at one pre-surgical visit, and at 6 and/or 12 months post-laparoscopic sleeve gastrectomy. Weight loss was compared between subjects with normal or abnormal baseline metabolic factors. Absolute BMI change was used to measure successful weight loss. Results: Higher baseline systolic blood pressure (SBP) was associated with greater weight loss as measured by body mass index (BMI) change and BMI standard deviation score (BMI-SDS) change at 6 and 12 months. Those patients in the 6-month follow up group with an abnormal hemoglobin A1C (HbA1c) at baseline had significantly more weight loss as measured by BMI-SDS. None of the other parameters, including fasting glucose, Metabolic Syndrome (MeS), liver function, triglycerides and waist circumference showed a predictive relationship. Discussion/Conclusion: Elevated SBP and HbA1c in adolescents with morbid obesity may reflect a population more likely to achieve successful weight loss, and thus, may be a good target for bariatric surgery, specifically laparoscopic sleeve gastrectomy, as an intervention for severe obesity. An assessment of behavioral differences in patients with and without elevated BP and HbA1c might explain the mechanism for the improved weight loss.
DOI: 10.6084/m9.figshare.23968995
title: Supplementary Material for: Patterns of Aortic Valve Replacement in Europe: Adoption by Age

description: Introduction: The management of patients with severe aortic stenosis (AS) may differ according to patient age. The aim of this analysis was to describe patterns of aortic valve replacement (AVR) use in European countries stratified by age. Methods: Procedure volume data for AVR, including surgical aortic valve replacement (sAVR) and transcatheter aortic valve implantation (TAVI), for the years 2015–2020 were obtained from national databases for twelve European countries (Austria, Czech Republic, Denmark, England, Finland, France, Germany, Norway, Poland, Spain, Sweden, and Switzerland). Procedure volumes were reported by patient age (&lt;50 years, by five-year age groups between 50 and 85 years, and ≥85 years). Patients per million population (PPM) undergoing AVR each year were calculated using population estimates from Eurostat. Results: AVR PPM varied widely between countries, from 508 PPM in Germany to 174 PPM in Poland in 2020. TAVI rates ranged from 61% in Switzerland and Finland to 25% in Poland. AVR PPM increased with age to a peak at 80–84 years, after which it decreased again. AVR procedures increased from 2015 to 2019 at an average annual rate of 3.9%. AVR increased more substantially in people aged ≥80 years than in younger age groups; these older age groups accounted for 30% of all AVR procedures in 2015 and 35% in 2019. TAVI accounted for an increasing proportion of all AVR procedures as patient age increased; an overall average of 96% of males and 98% of females aged ≥85 years received TAVI as the treatment modality, although adoption of TAVI differed between countries. Conclusions: There is considerable variation in the rates of AVR use and the adoption of TAVI versus sAVR between European countries. The use of TAVI has increased in recent years, particularly for older patients.
DOI: 10.6084/m9.figshare.23968995.v1
title: Supplementary Material for: Patterns of Aortic Valve Replacement in Europe: Adoption by Age

description: Introduction: The management of patients with severe aortic stenosis (AS) may differ according to patient age. The aim of this analysis was to describe patterns of aortic valve replacement (AVR) use in European countries stratified by age. Methods: Procedure volume data for AVR, including surgical aortic valve replacement (sAVR) and transcatheter aortic valve implantation (TAVI), for the years 2015–2020 were obtained from national databases for twelve European countries (Austria, Czech Republic, Denmark, England, Finland, France, Germany, Norway, Poland, Spain, Sweden, and Switzerland). Procedure volumes were reported by patient age (&lt;50 years, by five-year age groups between 50 and 85 years, and ≥85 years). Patients per million population (PPM) undergoing AVR each year were calculated using population estimates from Eurostat. Results: AVR PPM varied widely between countries, from 508 PPM in Germany to 174 PPM in Poland in 2020. TAVI rates ranged from 61% in Switzerland and Finland to 25% in Poland. AVR PPM increased with age to a peak at 80–84 years, after which it decreased again. AVR procedures increased from 2015 to 2019 at an average annual rate of 3.9%. AVR increased more substantially in people aged ≥80 years than in younger age groups; these older age groups accounted for 30% of all AVR procedures in 2015 and 35% in 2019. TAVI accounted for an increasing proportion of all AVR procedures as patient age increased; an overall average of 96% of males and 98% of females aged ≥85 years received TAVI as the treatment modality, although adoption of TAVI differed between countries. Conclusions: There is considerable variation in the rates of AVR use and the adoption of TAVI versus sAVR between European countries. The use of TAVI has increased in recent years, particularly for older patients.
DOI: 10.6084/m9.figshare.24136452.v1
title: Supplementary Material for: Diversity and evolution of highly repetitive DNA sequences constituting chromosome-site specific heterochromatin in two Gerbillinae species

description: Constitutive heterochromatin, consisting of repetitive sequences, diverges very rapidly; therefore, its nucleotide sequences and chromosomal distributions are often largely different, even between closely related species. The chromosome C-banding patterns of two Gerbillinae species, Meriones unguiculatus and Gerbillus perpallidus, vary greatly, even though they belong to the same subfamily. To understand the evolution of C-positive heterochromatin in these species, we isolated highly repetitive sequences, determined their nucleotide sequences, and characterized them using chromosomal and filter hybridization. We obtained a centromeric repeat (MUN-HaeIII) and a chromosome 13-specific repeat (MUN-EcoRI) from M. unguiculatus. We also isolated a centromeric/pericentromeric repeat (GPE-MBD) and an interspersed-type repeat that was predominantly amplified in the X and Y chromosomes (GPE-EcoRI) from G. perpallidus. GPE-MBD was found to contain a 17-bp motif that is essential for binding to the centromere-associated protein CENP-B. This indicates that it may play a role in the formation of a specified structure and/or function of centromeres. The nucleotide sequences of the three sequence families, except GPE-EcoRI, were conserved only in Gerbillinae. GPE-EcoRI was derived from the LINE-1 retrotransposon and showed sequence homology throughout Muridae and Cricetidae species, indicating that the repeat sequence occurred at least in the common ancestor of Muridae and Cricetidae. Due to a lack of assembly data of highly repetitive sequences constituting heterochromatin in whole-genome sequences of vertebrate species published to date, the knowledge obtained in this study provides useful information for a deep understanding of the evolution of repetitive sequences in not only rodents but also in mammals.
DOI: 10.6084/m9.figshare.24155148.v1
title: Supplementary Material for: A Knowledge Map of the Relationship between Diabetes and Stroke: A Bibliometric Analysis Study

description: Introduction: The correlation between diabetes and stroke has been studied extensively in epidemiological research. Here we used bibliometric software to visualize and analyze the literature related to diabetic stroke to provide an overview of the current state of research, hot spots, and future trends in the field. Methods: Based on the Web of Science Core Collection(WoSCC) database, we collected studies related to diabetic stroke from 2007 to May 2022. We used CiteSpace (version 6.1.R5), VOSviewer, and Sci-mago Graphica to create knowledge maps and conduct visual analyses on authors, countries, in-stitutions, cited references, and keywords, and Origin for statistical analysis. Results: We included a total of 5171 papers on diabetic stroke from the WoSCC database. Overall, there was a steady increase in the number of publications, with a high number of emerging scientists. The United States was the most productive and influential country, which dominated national col-laborations. The most common subject category was "neurology". In total, 12 major clusters were generated from the cited references. Keywords analysis showed that keywords related to post-stroke injury and treatment are those with the highest burst intensity and latest burst time. Conclusions: Individual disease treatment remains a hot topic and how to balance acute stroke treatment and glycemic control is currently a difficult clinical problem. At the same time, the mechanism of their interaction and the prevention and treatment of related causative factors remain a hot topic of current and future research.
DOI: 10.5281/zenodo.8344118
title: Geospatial Analysis of Road Conditions and Hazardous Factors in Communities on Continuous vs. Sporadic Permafrost in Greenland

description: Road conditions and hazardous factors were surveyed in two permafrost-affected communities of West Greenland, Ilulissat (underlain by continuous ice-rich permafrost) and Sisimiut (underlain by sporadic permafrost). Pavement damages, repairs, embankment structural elements, artificial drainage systems, water accumulations and preferential snow ploughing deposits were notably mapped and georeferenced in a geographic information system to form high-resolution spatial databases. In total, respectively 66 and 76 \% of the paved road networks of Ilulissat and Sisimiut were surveyed. Manual in-situ mapping took place in September 2020 and September 2021 in Ilulissat, while Global Navigation Satellite System (GNSS) equipment was used to map road conditions in Sisimiut in September 2020. The severity of the pavement damages was assessed according to the ASTM D 6433–07, Standard Practice for Roads and Parking Lots Pavement Condition Index Surveys, by ASTM International (2008). The drainage conditions were characterized following the recommendations in Cold Regions Pavement Engineering, by Doré, G. and Zubeck, H. K. (2009). This dataset comprises the geospatial layers of the road damage and hazard inventories created for the settlements of Ilulissat and Sisimiut. Each settlement’s inventory is provided in a ZIP-folder, containing the geospatial layers as geopackages and sorted following a thematic structure. Further information about each layer and its attributes can be found in the metadata PDF document.
description: This research was conducted as part of the Nunataryuk project, funded by the European Union Horizon 2020 research and innovation programme under grant agreement No. 773421, and the Tarajulik project, funded by the Greenland Research Council under grant agreement no. 80.30.
DOI: 10.5281/zenodo.8344119
title: Geospatial Analysis of Road Conditions and Hazardous Factors in Communities on Continuous vs. Sporadic Permafrost in Greenland

description: Road conditions and hazardous factors were surveyed in two permafrost-affected communities of West Greenland, Ilulissat (underlain by continuous ice-rich permafrost) and Sisimiut (underlain by sporadic permafrost). Pavement damages, repairs, embankment structural elements, artificial drainage systems, water accumulations and preferential snow ploughing deposits were notably mapped and georeferenced in a geographic information system to form high-resolution spatial databases. In total, respectively 66 and 76 \% of the paved road networks of Ilulissat and Sisimiut were surveyed. Manual in-situ mapping took place in September 2020 and September 2021 in Ilulissat, while Global Navigation Satellite System (GNSS) equipment was used to map road conditions in Sisimiut in September 2020. The severity of the pavement damages was assessed according to the ASTM D 6433–07, Standard Practice for Roads and Parking Lots Pavement Condition Index Surveys, by ASTM International (2008). The drainage conditions were characterized following the recommendations in Cold Regions Pavement Engineering, by Doré, G. and Zubeck, H. K. (2009). This dataset comprises the geospatial layers of the road damage and hazard inventories created for the settlements of Ilulissat and Sisimiut. Each settlement’s inventory is provided in a ZIP-folder, containing the geospatial layers as geopackages and sorted following a thematic structure. Further information about each layer and its attributes can be found in the metadata PDF document.
description: This research was conducted as part of the Nunataryuk project, funded by the European Union Horizon 2020 research and innovation programme under grant agreement No. 773421, and the Tarajulik project, funded by the Greenland Research Council under grant agreement no. 80.30.
DOI: 10.13145/bacdive12383.20190402.4
title: Sorangium cellulosum (Brockmann 1989) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive12384.20190402.4
title: Sorangium cellulosum (Brockmann 1989) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive12385.20190402.4
title: Sorangium cellulosum (Brockmann 1989) Reichenbach 2007

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive7429.20190402.4
title: Microbacterium ginsengisoli Park et al. 2008

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.
DOI: 10.13145/bacdive7430.20190402.4
title: Microbacterium pumilum Kageyama et al. 2006

description: The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology.