cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.1480463.v2
title: Environmental Layers - MCP

description: Environmental layers used to create panther hunting habitat model in MaxEnt. Layers were created with ArcGIS and include: Cattle Density, Distance from Edge, Dominant Landcover, Forest Edge Density, Forest Patch Size, Improved Pasture Patch Size, Landcover, Percent Forest Cover. We constructed Minimum Convex Polygons around the panther nighttime GPS locations used in the model and created the environmental variables within this area. The model was then projected onto our area of interest, private lands within the primary, secondary, and dispersal zones of panther habitat in southwest Florida.
DOI: 10.6084/m9.figshare.1480463.v1
title: Environmental Layers

description: Environmental layers used to create panther hunting habitat model in MaxEnt. Layers were created with ArcGIS and include: Cattle Density, Distance from Edge, Dominant Landcover, Forest Edge Density, Forest Patch Size, Improved Pasture Patch Size, Landcover, Percent Forest Cover. We constructed Minimum Convex Polygons around the panther nighttime GPS locations used in the model and created the environmental variables within this area. The model was then projected onto our area of interest, private lands within the primary, secondary, and dispersal zones of panther habitat in southwest Florida.
DOI: 10.6084/m9.figshare.1480397
title: openSNP - BOSC15 Slides

description: What if customers of personal genomics companies could donate their data into the public domain? Let's find out.
DOI: 10.6084/m9.figshare.1478830
title: Stoma Resistance Models for Green Roof Applications Fileset

description: Two stoma resistance formulations of green plants are compared. A brief parameter space exploration is performed. The variables changing are LAI and f1 in one model, and alfa and beta in the other. Python (MatPlotLib) scripts are provided to make the plots. The banner for the VII Brazilian Conference on Rheology is also part of the fileset.
DOI: 10.6084/m9.figshare.1478830.v1
title: Stoma Resistance Models for Green Roof Applications Fileset

description: Two stoma resistance formulations of green plants are compared. A brief parameter space exploration is performed. The variables changing are LAI and f1 in one model, and alfa and beta in the other. Python (MatPlotLib) scripts are provided to make the plots. The banner for the VII Brazilian Conference on Rheology is also part of the fileset.
DOI: 10.6084/m9.figshare.1478810
title: In search of phylogenetic congruence between molecular and morphological data in bryozoans with extreme adult skeletal heteromorphy

description: The taxonomy of cyclostome bryozoans, both recent and fossil, is founded almost entirely on characters of the mineralized skeleton. However, the adequacy of these characters is now being questioned by molecular sequence data. In this study we construct a molecular tree using ssrDNA and lsrDNA sequences and identify a clade of New Zealand cyclostomes containing species exhibiting widely different morphologies. In particular, <i>Diaperoecia purpurascens</i> (Hutton), a species assigned to the suborder Tubuliporina on the basis of adult skeletal morphology, is shown to be closely related to New Zealand species assigned to <i>Heteropora</i>, including <i>H. neozelanica</i> (Busk), which has a very different adult skeleton and is traditionally placed in the suborder Cerioporina. A new species resembling the Antarctic genus <i>Hastingsia</i>, ‘<i>H’. whitteni</i> sp. nov., from North Island, New Zealand, is found to belong to the same clade, despite being placed conventionally in a different family (Hastingsiidae) from both <i>Diaperoecia</i> (Diaperoeciidae) and <i>Heteropora</i> (Cerioporidae). These results challenge the utility of adult skeletal morphology in cyclostome taxonomy. In contrast to the striking dissimilarity between the adult skeletons of <i>D. purpurascens</i> and ‘<i>Hastingsia</i>’ <i>whitteni</i> compared with New Zealand species of <i>Heteropora</i>, morphological similarities in early colony development, as well as possibly the presence of a gizzard, corroborate the molecular interpretation of their close relationships. Greater attention should be paid in the future to early astogenetic characters in cyclostome taxonomy.http://zoobank.org/urn:lsid:zoobank.org:pub:CE81CE34-DE0F-43B6-A46E-E086F3F5E76D
DOI: 10.6084/m9.figshare.1478810.v2
title: In search of phylogenetic congruence between molecular and morphological data in bryozoans with extreme adult skeletal heteromorphy

description: The taxonomy of cyclostome bryozoans, both recent and fossil, is founded almost entirely on characters of the mineralized skeleton. However, the adequacy of these characters is now being questioned by molecular sequence data. In this study we construct a molecular tree using ssrDNA and lsrDNA sequences and identify a clade of New Zealand cyclostomes containing species exhibiting widely different morphologies. In particular, <i>Diaperoecia purpurascens</i> (Hutton), a species assigned to the suborder Tubuliporina on the basis of adult skeletal morphology, is shown to be closely related to New Zealand species assigned to <i>Heteropora</i>, including <i>H. neozelanica</i> (Busk), which has a very different adult skeleton and is traditionally placed in the suborder Cerioporina. A new species resembling the Antarctic genus <i>Hastingsia</i>, ‘<i>H’. whitteni</i> sp. nov., from North Island, New Zealand, is found to belong to the same clade, despite being placed conventionally in a different family (Hastingsiidae) from both <i>Diaperoecia</i> (Diaperoeciidae) and <i>Heteropora</i> (Cerioporidae). These results challenge the utility of adult skeletal morphology in cyclostome taxonomy. In contrast to the striking dissimilarity between the adult skeletons of <i>D. purpurascens</i> and ‘<i>Hastingsia</i>’ <i>whitteni</i> compared with New Zealand species of <i>Heteropora</i>, morphological similarities in early colony development, as well as possibly the presence of a gizzard, corroborate the molecular interpretation of their close relationships. Greater attention should be paid in the future to early astogenetic characters in cyclostome taxonomy.http://zoobank.org/urn:lsid:zoobank.org:pub:CE81CE34-DE0F-43B6-A46E-E086F3F5E76D
DOI: 10.6084/m9.figshare.1478803
title: Dataset

description: Dataset
DOI: 10.6084/m9.figshare.1478806.v1
title: Proposte per i principi della cognizione e per gli strumenti che consentono di esprimerli

description: Recentemente sono stati ottenuti importanti e sorprendenti risultati nel campo delle reti neurali e degli agenti intelligenti tramite l’approccio deep learning. Questi risultati sono dovuti al miglioramento delle tecniche di composizione e addestramento delle reti nonché alla disponibilità di potenza di calcolo fornita da calcolatori vettoriali a basso costo (GPU). Ma l’aspetto più importante è costituito dalla struttura gerarchica che queste reti presentano e dalla loro capacità di astrarre. Tuttavia diversi ricercatori hanno segnalato che permangono importanti lacune teoriche in questo approccio. Credo che il presente lavoro possa contribuire a colmare queste lacune. Nella sostanza, riassumendo, in forma molto compatta e semplificata, alcuni dei concetti illustrati all’interno del libro, propongo l’ipotesi che i successi delle tecniche di deep learning siano dovuti al fatto che le reti neurali in esse utilizzate permettono di accedere ad un particolare complesso di regolarità e regole emergenti. Si può mostrare che si tratta di quella tipologia di regole che costituisce la spina dorsale della nostra conoscenza semantica naturale. Si può ben argomentare che per accedere a queste regole è necessario eseguire particolari trasformazioni nelle rappresentazioni di base, costituite per buona parte da operazioni di derivazione strutturale. Come verrà illustrato nelle pagine che seguono questi concetti possono essere ben precisati e grazie ad essi appare possibile identificare alcuni principi molto generali e potenti.
DOI: 10.6084/m9.figshare.1478810.v1
title: In search of phylogenetic congruence between molecular and morphological data in bryozoans with extreme adult skeletal heteromorphy

description: The taxonomy of cyclostome bryozoans, both recent and fossil, is founded almost entirely on characters of the mineralized skeleton. However, the adequacy of these characters is now being questioned by molecular sequence data. In this study we construct a molecular tree using ssrDNA and lsrDNA sequences and identify a clade of New Zealand cyclostomes containing species exhibiting widely different morphologies. In particular, <i>Diaperoecia purpurascens</i> (Hutton), a species assigned to the suborder Tubuliporina on the basis of adult skeletal morphology, is shown to be closely related to New Zealand species assigned to <i>Heteropora</i>, including <i>H. neozelanica</i> (Busk), which has a very different adult skeleton and is traditionally placed in the suborder Cerioporina. A new species resembling the Antarctic genus <i>Hastingsia</i>, ‘<i>H’. whitteni</i> sp. nov., from North Island, New Zealand, is found to belong to the same clade, despite being placed conventionally in a different family (Hastingsiidae) from both <i>Diaperoecia</i> (Diaperoeciidae) and <i>Heteropora</i> (Cerioporidae). These results challenge the utility of adult skeletal morphology in cyclostome taxonomy. In contrast to the striking dissimilarity between the adult skeletons of <i>D. purpurascens</i> and ‘<i>Hastingsia</i>’ <i>whitteni</i> compared with New Zealand species of <i>Heteropora</i>, morphological similarities in early colony development, as well as possibly the presence of a gizzard, corroborate the molecular interpretation of their close relationships. Greater attention should be paid in the future to early astogenetic characters in cyclostome taxonomy.http://zoobank.org/urn:lsid:zoobank.org:pub:CE81CE34-DE0F-43B6-A46E-E086F3F5E76D
DOI: 10.6084/m9.figshare.1478803.v1
title: Dataset

description: Dataset
DOI: 10.6084/m9.figshare.1478783
title: Perceptions of competence, strength, and age influence voters to select leaders with lower-pitched voices

description: Data from Study 1, voter as unit of analysis, used in Perceptions of competence, strength, and age influence voters to select leaders with lower-pitched voices (Klofstad et al.)
DOI: 10.6084/m9.figshare.1478784
title: Perceptions of competence, strength, and age influence voters to select leaders with lower-pitched voices

description: Data from Study 2 of Perceptions of competence, strength, and age influence voters to select leaders with lower-pitched voices (Klofstad et al.)
DOI: 10.6084/m9.figshare.1478806.v2
title: Proposte per i principi della cognizione e per gli strumenti che consentono di esprimerli

description: Recentemente sono stati ottenuti importanti e sorprendenti risultati nel campo delle reti neurali e degli agenti intelligenti tramite l’approccio deep learning. Questi risultati sono dovuti al miglioramento delle tecniche di composizione e addestramento delle reti nonché alla disponibilità di potenza di calcolo fornita da calcolatori vettoriali a basso costo (GPU). Ma l’aspetto più importante è costituito dalla struttura gerarchica che queste reti presentano e dalla loro capacità di astrarre. Tuttavia diversi ricercatori hanno segnalato che permangono importanti lacune teoriche in questo approccio. Credo che il presente lavoro possa contribuire a colmare queste lacune. Nella sostanza, riassumendo, in forma molto compatta e semplificata, alcuni dei concetti illustrati all’interno del libro, propongo l’ipotesi che i successi delle tecniche di deep learning siano dovuti al fatto che le reti neurali in esse utilizzate permettono di accedere ad un particolare complesso di regolarità e regole emergenti. Si può mostrare che si tratta di quella tipologia di regole che costituisce la spina dorsale della nostra conoscenza semantica naturale. Si può ben argomentare che per accedere a queste regole è necessario eseguire particolari trasformazioni nelle rappresentazioni di base, costituite per buona parte da operazioni di derivazione strutturale. Come verrà illustrato nelle pagine che seguono questi concetti possono essere ben precisati e grazie ad essi appare possibile identificare alcuni principi molto generali e potenti.
DOI: 10.6084/m9.figshare.1478784.v1
title: Perceptions of competence, strength, and age influence voters to select leaders with lower-pitched voices

description: Data from Study 2 of Perceptions of competence, strength, and age influence voters to select leaders with lower-pitched voices (Klofstad et al.)
DOI: 10.6084/m9.figshare.1478783.v1
title: Perceptions of competence, strength, and age influence voters to select leaders with lower-pitched voices

description: Data from Study 1, voter as unit of analysis, used in Perceptions of competence, strength, and age influence voters to select leaders with lower-pitched voices (Klofstad et al.)
DOI: 10.6084/m9.figshare.1478782
title: Perceptions of competence, strength, and age influence voters to select leaders with lower-pitched voices

description: Data from Study 1, candidate as unit of analysis, used in Perceptions of competence, strength, and age influence voters to select leaders with lower-pitched voices (Klofstad et al.)
DOI: 10.6084/m9.figshare.1478714
title: Modelling consumer intakes of vegetable oils and fats

description: Vegetable oils and fats make up a significant part of the energy intake in typical European diets. However, their use as ingredients in a diverse range of different foods means that their consumption is often hidden, especially when oils and fats are used for cooking. As a result, there are no reliable estimates of the consumption of different vegetable oils and fats in the diet of European consumers for use in, for example, nutritional assessments or chemical risk assessments. We have developed an innovative model to estimate the consumption of vegetable oils and fats by European Union consumers using the European Union consumption databases and elements of probabilistic modelling. A key feature of the approach is the assessment of uncertainty in the modelling assumptions that can be used to build user confidence and to guide future development.
DOI: 10.6084/m9.figshare.1478680
title: Chemical caressess: geographical variation of male sexual signals in a Neotropical scorpion

description: Differences in sexual signals among species are common, and may influence mate recognition and reproductive isolation. In scorpions, behavioural mechanisms and other sexual signals involved in mate selection and reproductive isolation have been scarcely studied. In this paper, we compare different male sexual signals between two distant populations of the scorpion <em>Bothriurus bonariensis</em>, one located in Uruguay and the other in Central Argentina. We compare sexual behaviours from intra-populations and inter-populations matings. In addition, we extent this comparison to the secreted compounds and morphology of the exocrine glands located on the dorsal side of the telson in this species. Males of <em>B. bonariensis</em> performed stimulatory behaviours to the female with different frequency of occurrence and duration in the two populations. Chemical analyses of the glandular extracts showed that Uruguayan males present compounds which are absent in males of Argentinian population. In addition, we observed that in inter-population matings, stimulatory behaviours had intermediate patterns to intra-population matings. However, males failed to achieve a successful sperm transfer with females of different population. Mechanisms of sexual isolation between these two distant populations of <em>B. bonariensis</em> apparently seem to have evolved due to divergence in allopatry. The differences in stimulatory levels during courtship between the two populations studied here give evidence for an early behavioural divergence promoted by sexual selection.
DOI: 10.6084/m9.figshare.1478714.v1
title: Modelling consumer intakes of vegetable oils and fats

description: Vegetable oils and fats make up a significant part of the energy intake in typical European diets. However, their use as ingredients in a diverse range of different foods means that their consumption is often hidden, especially when oils and fats are used for cooking. As a result, there are no reliable estimates of the consumption of different vegetable oils and fats in the diet of European consumers for use in for example, nutritional assessments or chemical risk assessments. We have developed an innovative model to estimate the consumption of vegetable oils and fats by EU consumers using the EU consumption databases and elements of probabilistic modelling. A key feature of our approach is the assessment of uncertainty in the modelling assumptions that can be used to build user confidence and to guide future development.
DOI: 10.6084/m9.figshare.1478680.v1
title: Chemical caressess: geographical variation of male sexual signals in a Neotropical scorpion

description: Differences in sexual signals among species are common, and may influence mate recognition and reproductive isolation. In scorpions, behavioural mechanisms and other sexual signals involved in mate selection and reproductive isolation have been scarcely studied. In this paper, we compare different male sexual signals between two distant populations of the scorpion <em>Bothriurus bonariensis</em>, one located in Uruguay and the other in Central Argentina. We compare sexual behaviours from intra-populations and inter-populations matings. In addition, we extent this comparison to the secreted compounds and morphology of the exocrine glands located on the dorsal side of the telson in this species. Males of <em>B. bonariensis</em> performed stimulatory behaviours to the female with different frequency of occurrence and duration in the two populations. Chemical analyses of the glandular extracts showed that Uruguayan males present compounds which are absent in males of Argentinian population. In addition, we observed that in inter-population matings, stimulatory behaviours had intermediate patterns to intra-population matings. However, males failed to achieve a successful sperm transfer with females of different population. Mechanisms of sexual isolation between these two distant populations of <em>B. bonariensis</em> apparently seem to have evolved due to divergence in allopatry. The differences in stimulatory levels during courtship between the two populations studied here give evidence for an early behavioural divergence promoted by sexual selection.
DOI: 10.6084/m9.figshare.1478064
title: Inflammasome

description: interleukin1 and inflammasome in pain behavior
DOI: 10.6084/m9.figshare.1478066
title: Marble trout life histories

description: Code and the data for the manuscript "Within and among-population variation in vital traits and dynamics in a variable environment" by Simone Vincenzi, Marc Mangel, Dusan Jesensek, J Carlos Garza, Alain J Crivelli. Online Code and Results reports at this time some additional results that are referred to, but not reported in the manuscript. At a later stage it will report all results as to provide complete and reproducible analyses.
DOI: 10.6084/m9.figshare.1478714.v2
title: Modelling consumer intakes of vegetable oils and fats

description: Vegetable oils and fats make up a significant part of the energy intake in typical European diets. However, their use as ingredients in a diverse range of different foods means that their consumption is often hidden, especially when oils and fats are used for cooking. As a result, there are no reliable estimates of the consumption of different vegetable oils and fats in the diet of European consumers for use in, for example, nutritional assessments or chemical risk assessments. We have developed an innovative model to estimate the consumption of vegetable oils and fats by European Union consumers using the European Union consumption databases and elements of probabilistic modelling. A key feature of the approach is the assessment of uncertainty in the modelling assumptions that can be used to build user confidence and to guide future development.
DOI: 10.6084/m9.figshare.1478064.v1
title: Inflammasome

description: interleukin1 and inflammasome in pain behavior
DOI: 10.6084/m9.figshare.1478066.v2
title: Marble trout life histories

description: Code and the data for the manuscript "Within and among-population variation in vital traits and dynamics in a variable environment" by Simone Vincenzi, Marc Mangel, Dusan Jesensek, J Carlos Garza, Alain J Crivelli. Online Code and Results reports at this time some additional results that are referred to, but not reported in the manuscript. At a later stage it will report all results as to provide complete and reproducible analyses.
DOI: 10.6084/m9.figshare.1478050
title: Ryan_Browlie_Whyard-Stress_Hsp90_Transposon

description: Abstract: Background: Transposable elements (TEs) have been recognized as potentially powerful drivers of genomic evolutionary change, but factors affecting their mobility and regulation remain poorly understood. Chaperones such as Hsp90 buffer environmental perturbations by regulating protein conformation, but are also part of the PIWI-interacting RNA pathway, which regulates genomic instability arising from mobile TEs in the germline. Stress-induced mutagenesis from TE movement could thus arise from functional trade-offs in the dual roles of Hsp90. Results: We examined the functional constraints of Hsp90 and its role as a regulator of TE mobility by exposing nematodes (Caenorhabditis elegans and C. briggsae) to environmental stressors, with and without RNAi-induced silencing of Hsp90. TE excision rates increased with environmental stress intensity at multiple loci in several strains of each species. These effects were compounded by RNAi-induced knockdown of Hsp90. Mutation frequencies at the unc-22 marker gene in the offspring of exposed animals mirrored the effects of our environmental stressors and RNAi-induced silencing of Hsp90. Conclusions: Our results support a role for Hsp90 in the suppression of TE mobility, and demonstrate that that these regulatory mechanisms can be overwhelmed with moderate environmental stressors. By affecting genomic stability in germline cells, stress-induced mutations arising from TE mobility and insertions affect the phenotype and genotype of subsequent generations. These findings have important implications for understanding stress-induced mutagenesis and genome evolutionary change.
DOI: 10.6084/m9.figshare.1478066.v1
title: Marble trout life histories

description: Code and the data for the manuscript "Within and among-population variation in vital traits and dynamics in a variable environment" by Simone Vincenzi, Marc Mangel, Dusan Jesensek, J Carlos Garza, Alain J Crivelli.