cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.15468/dl.dw4he7
title: Occurrence Download

description: A dataset containing 45896 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Quercus canariensis",
 "BasisOfRecord is one of (Human Observation)"
 ]
}

 The dataset includes 45896 records from 28 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044825-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.s8jmer
title: Occurrence Download

description: A dataset containing 6942 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is one of (Chelonoidis denticulatus, Podocnemis expansa)",
 "HasCoordinate is true"
 ]
}

 The dataset includes 6942 records from 79 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044828-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.bufgnn
title: Occurrence Download

description: A dataset containing 2 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Lepidasthenia mossambica",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 2 records from 2 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044827-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.zs3w6p
title: Occurrence Download

description: A dataset containing 2777907 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is France",
 "TaxonKey is Odonata"
 ]
}

 The dataset includes 2777907 records from 5366 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0044799-251120083545085/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-36811
title: Lam Jeevaratnum, India, 1941-1960

description: [description english/roman)] Photos & correspondence from Eastern Full Gospel Mission; newspaper cuttings; Before Kingslife story of Lam Jeevaratnum.
DOI: 10.15468/dl.xnfdwc
title: Occurrence Download

description: A dataset containing 19 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Orthochromis kalungwishiensis (Greenwood & Kullander, 1994)"
 ]
}

 The dataset includes 19 records from 5 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0337027-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-36713
title: John Jameson, Brazil, 1919-1928

description: [description english/roman)] Sailed from Liverpool 1921-08-24; resigned from PMU/AOG 1928-07-21; photo; application forms; correspondence.
DOI: 10.15468/dl.abmz37
title: Occurrence Download

description: A dataset containing 5650 species occurrences available in GBIF matching the query:
{
 "and" : [
 "DatasetKey is iNaturalist Research-grade Observations",
 "TaxonKey is Macrocystis pyrifera (L.) C.Agardh"
 ]
}

 The dataset includes 5650 records from 1 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067522-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.cev4t4
title: Occurrence Download

description: A dataset containing 7101 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is El Salvador",
 "OccurrenceStatus is Present",
 "TaxonKey is Chiroptera"
 ]
}

 The dataset includes 7101 records from 24 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0141198-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.drkjz7
title: Occurrence Download

description: A dataset containing 22 species occurrences available in GBIF matching the query:
{
 "and" : [
 "TaxonKey is Chrysoperla furcifera (Okamoto, 1914)",
 "HasCoordinate is true",
 "Country is Japan",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 22 records from 6 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0210403-220831081235567/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-36843
title: Lam Jeevaratnum, India, 1941-1960

description: [description english/roman)] Photos & correspondence from Eastern Full Gospel Mission; newspaper cuttings; Before Kingslife story of Lam Jeevaratnum.
DOI: 10.15468/dl.a7brhg
title: Occurrence Download

description: A dataset containing 4379949 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Geometry POLYGON((11.10059 46.35527,8.00684 46.35527,6.6709 45.12858,7.58496 43.87493,9.83496 44.37962,11.52246 42.02237,13.91309 41.07521,15.24902 39.9527,16.2334 38.48197,9.4834 41.39247,7.58496 40.70313,8.63965 38.97564,12.8584 37.31688,15.53027 36.8682,17.70996 39.03028,18.34277 40.16796,13.9834 43.26361,12.22559 45.52405,13.35059 46.11209,11.10059 46.35527))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false"
 ]
}

 The dataset includes 4379949 records from 1256 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0105799-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.25549/pcra-c14-46394
title: Redemption tidings, vol. 18, nos. 1-26, 2 Jan. - 18 Dec. 1942

description: [description english/roman)] Issued fortnightly (every two weeks). "A full gospel magazine for all believers" -- subtitle. Includes Tidings from our missionaries in each issue (1 Jan. - 22 May, 19 June, 17 July - 4 Dec. 1942) except vol. 18, nos. 11, 14 & 26.
DOI: 10.15468/dl.xwtyme
title: Occurrence Download

description: A dataset containing 24433 species occurrences available in GBIF matching the query:
{
 "TaxonKey" : [
 "is Sphagnum subsecundum Nees"
 ]
}

 The dataset includes 24433 records from 299 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0067533-230224095556074/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.7g56dm
title: Occurrence Download

description: A dataset containing 251 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is one of (Observation, Machine Observation, Human Observation, Material sample, Material citation, Specimen, Occurrence evidence)",
 "Geometry POLYGON((0 -90,180 -90,180 -45,0 -45,0 -90))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "OccurrenceStatus is Present",
 "TaxonKey is Tardigrada"
 ]
}

 The dataset includes 251 records from 17 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0009944-230828120925497/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.15468/dl.taqveq
title: Occurrence Download

description: A dataset listing the 2694 species recorded in GBIF matching the query:
{
 "and" : [
 "Country is Korea (Democratic People’s Republic of)",
 "HasCoordinate is true",
 "Year is less than 1996",
 "HasGeospatialIssue is false"
 ]
}

 The dataset's 2694 records were derived from 69 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0141205-210914110416597/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.57745/rcmagh
title: Database of a literature review on dispersal and gene flow in anadromous salmonids

description: This repository gathers the databases and R script used for the literature review titled "Dispersal and gene flow in anadromous salmonids: a systematic review" and published in the journal Ecology of Freshwater Fish (Article DOI: 10.1111/EFF.12811). The database named "Supplementary_material2" contains the 228 original research studies included in the review (based on Atlantic salmon, Coho salmon, Chum salmon, Pink salmon, Sockeye salmon, Chinook salmon, Steelhead trout, and Brown trout). The database named "Supplementary_material3" contains the estimated values of emigration rates, immigration rates, and gene flow collected from 183 studies of the review.
DOI: 10.57745/rgizyc
title: Escobase

description: Compiling the Escobase (EScherichia COli dataBASE) was part of Lucile Martin's Internship for her MSc-1 at the University of Clermont-Auvergne, who PS supervised from May-August 2023. The E. coli genomes were downloaded or assembled with SPADES (when only reads were present), and after examination of the metadata to select only the genomes of isolates from cattle, the Escobase was put together. We compared the predicted ORFs (identified with Prodigal) of all genomes to the virulence factor database (VFdb), the ResFinder AMR database, and a custom-made database using genes which have been shown to contribute to bacterial acid resistance (AcR_AA_nr_latest30Dec2024.faa ).
DOI: 10.57745/quno73
title: Les Bryophytes comme indicateurs de qualité de l’eau: Promenade le long du Gave d’Aspe, du Gave d’Oloron et du Río Aragón (Espagne)

description: Livret guide réalisé conjointement par l’Université de Pau et des Pays de l’Adour et Biotope. Il propose de découvrir la richesse des communautés bryophytiques en lien avec les conditions environnementales du gave d’Aspe, du gave d’Oloron (tronçon Oloron-Peyrehorade) et du río Aragón (de sa source au barrage de Yesa, Espagne).
DOI: 10.57745/rbrilw
title: Cartographie des scolytes par la méthode fordead - Juillet 2022

description: Ce dataset contient les résultats de la détection des anomalies dues aux scolytes par la méthode fordead sur les régions Grand-Est, Bourgogne-Franche-Comté et les trois départements Ain, Savoie et Haute-Savoie à partir des données Sentinel-2 disponibles mi-juillet 2022. Le dataset contient un fichier readme donne des détails sur les différentes données, ainsi qu'un fichier pdf "analyse_surface" avec quelques graphiques à partir des résultats.
DOI: 10.57745/ta5yzs
title: Questionnaire pour mener un retour d'expérience sur les impacts d'une inondation auprès d'habitants

description: Ce questionnaire a été élaboré par l'équipe de l'observatoire so-ii suite à l'inondation du 19 septembre 2020 sur le territoire d'étude de so-ii (bassin versant du Lez et Bassin de l'Or, département de l'Hérault). Les enquêteurs ont réalisé les entretiens avec chaque habitant en face à face. L'outil utilisé par les enquêteurs est le logiciel limesurvey (fichier .lss du questionnaire). Pour sa diffusion, nous avons également publié une version en ligne à : https://sondages.inrae.fr/index.php/277473?lang=fr Cette étude s'inscrit dans la Tâche d'Observation REX de so-ii. Plus d'informations à : http://so-ii.org/to-rex/ Pour toute question, n'hésitez à nous contacter à : so-ii@so-ii.org
DOI: 10.57745/tryoes
title: Questionnaire et réponses suite à une notification d’alerte sur téléphone portable via le dispositif FR-Alert ©

description: Le jeu de données contient un questionnaire administré auprès d’individus ayant reçu une notification d’alerte sur leur téléphone portable lors de l’exercice tsunami du 19 janvier 2024 (cf. fichier DataSet1), et un échantillon de réponses à ce questionnaire (cf. fichier DataSet2). L’exercice tsunami a été organisé via le dispositif FR-Alert © (https://fr-alert.gouv.fr/), simultanément dans 9 départements du littoral méditerranéen : Alpes-Maritimes, Var, Bouches-du-Rhône, Gard, Hérault, Aude, Pyrénées-Orientales, Haute-Corse et Corse-du-Sud. Lien vers l’exercice : https://www.alpes-maritimes.gouv.fr/Actualites/Vendredi-19-janvier-2024-Exercice-tsunami-test-FR-Alert-sur-le-littoral-mediterraneen. Chaque individu présent dans la zone et ayant reçu cette notification avait la possibilité de cliquer sur un lien vers le questionnaire en ligne comportant 18 questions et permettant de laisser un commentaire libre (cf. DataSet1). 4566 commentaires ont été collectés pour cet exercice. Un échantillon de 100 réponses à ce questionnaire est présenté dans le jeu de données DataSet2, après curation et anonymisation (cf. Readme.txt). Ce fichier contient des données qualitatives pour chaque répondant : le département dans lequel il se trouvait, son âge, la première impression lors de la réception de l’alerte, et un commentaire libre (les autres informations/colonnes ont été supprimées pour des raisons d’anonymisation. ---- L’intérêt de ce jeu de données est de montrer la nature des données collectées (notamment les commentaires libres), et la méthode suivie pour l’analyse de ces réponses. Pour des raisons d’anonymisation, nous avons choisi de ne déposer qu'une petite partie des commentaires collectés sur la totalité des exercices effectués en France entre 2022 et 2024 (12260 commentaires en tout), afin d’illustrer la démarche et la méthode proposée pour leur analyse (méthode PNRA expliquée dans l’article). Ces données ne permettent pas la reproductibilité sur la base des données déposées, mais la reproductibilité de la méthode sur des données similaires.
DOI: 10.57745/pngw7g
title: Replication data for Epigenetic memory of temperature during somatic embryo maturation in 2-year-old maritime pine trees

description: Embryogenesis is a brief but potentially critical phase in the tree life cycle for adaptive phenotypic plasticity. Using somatic embryogenesis in maritime pine, we found that temperature during the maturation phase affects embryo development and post-embryonic tree growth for up to three years. We examined whether this somatic stress memory could stem from temperature- and/or development-induced changes in DNA methylation. To do this, we developed a 200 Mb custom sequence capture bisulfite analysis of genes and promoters to identify differentially methylated cytosines (DMCs) between temperature treatments (18, 23, and 28 degrees C and developmental stages (immature and cotyledonary embryos, shoot apical meristem of 2-year-old plants) and investigate if these differences can be mitotically transmitted from embryonic to post-embryonic development (epigenetic memory). We identified ten genes involved in defense responses and adaptation, embryo development and chromatin regulation that are candidates for the establishment of a persistent epigenetic memory of temperature sensed during embryo maturation in maritime pine. This work is part of the Supplementary Materials for the publication Trontin et al https://doi.org/10.1101/2024.06.27.600784 Here, we give the raw data for the 200 Mb custom sequence capture bisulfite (Sup Mat 2) with the sequence of the capture probes (Roche technology) with 3 BEd files corresponding to the capture of the 866 model genes, the promoters and all the Unigenes available on maritime Pine. These 3 subets of sequences are given in the 'reference sequence' file with 2 fasta files and one Bed file. All the genes analaysez in this study have been evaluated for the Gene Ontology enrichement method (Sup Mat 3) using the software 'Metascape' (https://metascape.org/gp/index.html#/main/step1). The gene ID are given in one file and teh results of the metascape GO enrichement are given in the other file by sample analysis (type of plant matrerial : early somatic embryo, cotyledonary somatic embryo or shoot apical meristem of 2 years old tree) and temperature (18, 23 or 28°C). Sup Mat 2 : Sequence capture design Sup Mat 3 : GO analysis with Metascape
DOI: 10.57745/qpf3co
title: J2000 Hydrological model of the Vantaanjoki-Lepsämänjoki river basin (Finland)

description: J2K_Vantaanjoki: J2000 hydrological model for the Vantaanjoki river basin (which includes the Lepsämänjoki sub-basin).
DOI: 10.57745/tawihx
title: Radiation hybrids presence/absence data to Servin et al.: High-resolution autosomal radiation hybrid maps of the pig genome and their contribution to the genome sequence assembly. BMC Genomics 2012 13:585.

description: Vectors of presence absence of the markers of porcine Illumina porcineSNP60 Array on clones of pig IMpRH & IMNpRH2 RH panels in Carthagene format ( https://miat.inrae.fr/CarthaGene/index.html ).
DOI: 10.57745/tmb0hr
title: Near surface geophysics dataset from Bajocian limestones outcropping in 4 quarries of the eastern Paris Basin

description: Near surface geophysics dataset from Bajocian limestones outcropping in 4 quarries of the eastern Paris Basin. This dataset contains raw data from near surface geophysics profiles carried out in 4 quarries of the eastern Paris Basin - Attignéville, WGS84 coordinates : 48.386156, 5.830445 - Beaufremont, WGS84 coordinates : 48.265427, 5.751903 - Rouvres-la-Chétive, WGS84 coordinates : 48.306249, 5.765147 - Sommerécourt, WGS84 coordinates : 48.230191, 5.641293 Five Electrical Resistivity Tomography (ERT) profiles have been acquired: (1) ERT1 at Attigneville, (2) ERT2, (3) ERT3 and (4) ERT4 at Beaufremont, and (5) ERT5 at Sommerécourt. Four Seismic Refraction profiles (S) have been acquired: (1) S1 at Beaufremont, (2) S2 at Sommerécourt, (3) S3 and (4) S4 at Rouvres-la-Chétive.
DOI: 10.57745/smkgry
title: Role of hydride ion within Ru/LaScSi and Ru/CeTiGe catalysts for NH3 synthesis: A combination of DFT and experimental nitrogen isotopic exchange studies

description: Data set from Role of hydride ion within Ru/LaScSi and Ru/CeTiGe catalysts for NH3 synthesis: A combination of DFT and experimental nitrogen isotopic exchange studies - Publication : Croisé C., Alabd K., Villesuzanne A., Can F., Courtois X., Gaudin E., Tencé S. and Bion N. Role of hydride ion within Ru/LaScSi and Ru/CeTiGe catalysts for NH3 synthesis: A combination of DFT and experimental nitrogen isotopic exchange studies. Catalysis Communication 2023 vol.179, p.106689 (11 p.). HAL : Hal-04123769 Dataset production context : The design of catalysts active for ammonia synthesis under mild conditions of temperature and pressure is a new grail for its production process based on green hydrogen and intermittent renewable energy sources. Ru/LaScSi and Ru/CeTiGe are investigated with an approach combining DFT calculations and 15N/14N homomolecular exchange experiments. Ru/LaScSi is the most active of both catalysts. It has electride-like properties which are enhanced when partially hydrogenated leading to higher activity in nitrogen equilibration reaction. Ru/CeTiGe, relatively active despite the absence of electride-like character, is proposed to produce NH3 following the associative mechanism with the assistance of absorbed H. For more information see the article.
DOI: 10.57745/rohf9x
title: Three multimodal and multi resolution hyperspectral images of plant tissues at the microscopic scale for testing fusion – multiblock - multisets data analysis algorithms. Données de réplication

description: We propose here a dataset of paired hyperspectral images. The set consists of three hyperspectral images that were part of the PhD thesis of F. Allouche. Mid-Infrared, Raman and deep UV autofluorescence images were acquired using different microspectrophotometers for a vascular bundle in a maize stem, taken as a plant model. The spatial resolution differed between the three techniques requiring specific development for pairing and analysing the data while preserving the full resolution. The data tables are proposed after pairing under the form of 2-ways and 3-ways matrices as described in Allouche et al. (2012). The data are shared with the aim to test and compare fusion, multiblock or multisets algorithms developed within different scientific communities.
DOI: 10.57745/shxhp4
title: Indicateurs sur les successions culturales 2015-2021

description: Indicateurs sur les successions culturales 2015-2021 Les indicateurs, portant notamment sur la diversité temporelle des cultures, des familles botaniques, les surfaces en monoculture, la saisonnalité des cultures, la présence de légumineuses, de prairies temporaires, ainsi que les délais de retour, sont calculés sur le sous-ensemble des terres arables. Les surfaces en prairies permanentes, cultures permanentes sont exclues ici. Différents niveaux d'agrégation sont disponibles : communes, départements, régions, et total France métropolitaine. Ces indicateurs sont calculés à partir des données de séquences de culture : Girault, Baptiste; Martin, Philippe, 2023, "Séquences de culture, France, 2015-2021", https://doi.org/10.57745/PMD42J, Recherche Data Gouv, V1.
DOI: 10.57745/sl7zcw
title: Modane Giant Grid Hot-Wire Measurements

description: This dataset contains files with hot-wire (CTA) measurements carried in the giant grid turbulence experiment in 2014 in the S1MA wind tunnel of ONERA (Modane) in the context of ESWIRP european project. This experiment aims at a detailed investigation of the statistical properties of turbulent flows at large Reynolds numbers. The primary goal is to take advantage of the unequaled large-scale dimensions of the ONERA S1MA wind-tunnel facility, to make available to the broad turbulence community high-quality experimental turbulence data with unprecendented resolution (both spatial and temporal) and accuracy (in terms of statistical convergence). With this goal, we designed the largest grid-generated turbulence experiment planned and performed to date. Grid turbulence is a canonical flow known to produce almost perfectly homogeneous and isotropic turbulence (HIT) which remains a unique framework to investigate fundamental physics of turbulent flows. The dataset is composed of pre-calibrated longitudinal (1D) velocity signals (stored in matlab files) from 6 hot wires at various Reynolds numbers and various distances from the grid. Measurements were taken for 6 distances from the grid : 14.05m, 7.9m, 10.9m, 17.3m, 20.48m, 23.16m and 4 different wind velocities (i.e. 4 different Reynolds numbers) : 20m/s, 25m/s, 35m/s, 45 m/s (corresponding to Reynolds numbers based on Taylor microscope ranging from 290 to 500. Details of acquisition parameters and explored physical parameters are available in the README file. Have Fun!!
DOI: 10.57745/t1x0wx
title: ANNEXES to Deliverable D3.2

description: This dataset contains the annexes of D3.2 of FAIRCHAIN project: - LCA applied to French CS - LCA applied to Greek CS
DOI: 10.57745/xyudut
title: 1H-NMR profiles of plasma of selected or non-selected strains of trout fed mixes of alternative ingredients

description: 500 MHz 1H-NMR spectra of plasma of selected or non-selected strains for plant-based diets of trout fed mixes of alternative ingredients (insect extract, yeast wall extract, spirulina). Fish genetic selection for plant-based diets