cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.60712/si-id73068.2
title: StrainInfo SI-ID 73068.2

description: StrainInfo dataset 73068 about a strain of Zasmidium musigenum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73069.2
title: StrainInfo SI-ID 73069.2

description: StrainInfo dataset 73069 about a strain of Hypoxylon rubiginosum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73070.2
title: StrainInfo SI-ID 73070.2

description: StrainInfo dataset 73070 about a strain of Asteromyces cruciatus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73071.2
title: StrainInfo SI-ID 73071.2

description: StrainInfo dataset 73071 about a strain of Botryotinia calthae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73072.2
title: StrainInfo SI-ID 73072.2

description: StrainInfo dataset 73072 about a strain of Aspergillus tabacinus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73073.2
title: StrainInfo SI-ID 73073.2

description: StrainInfo dataset 73073 about a strain of Botrytis cinerea. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73074.2
title: StrainInfo SI-ID 73074.2

description: StrainInfo dataset 73074 about a strain of Papulaspora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73075.2
title: StrainInfo SI-ID 73075.2

description: StrainInfo dataset 73075 about a strain of Bipolaris sorokiniana. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73076.2
title: StrainInfo SI-ID 73076.2

description: StrainInfo dataset 73076 about a strain of Rosellinia thelena. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73077.2
title: StrainInfo SI-ID 73077.2

description: StrainInfo dataset 73077 about a strain of Beauveria bassiana. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73078.2
title: StrainInfo SI-ID 73078.2

description: StrainInfo dataset 73078 about a strain of Neonectria candida. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73079.2
title: StrainInfo SI-ID 73079.2

description: StrainInfo dataset 73079 about a strain of Fusarium culmorum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73080.2
title: StrainInfo SI-ID 73080.2

description: StrainInfo dataset 73080 about a strain of Curvularia spicifera. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73081.2
title: StrainInfo SI-ID 73081.2

description: StrainInfo dataset 73081 about a strain of Botrytis aclada. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73082.2
title: StrainInfo SI-ID 73082.2

description: StrainInfo dataset 73082 about a strain of Aspergillus insolitus. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73083.2
title: StrainInfo SI-ID 73083.2

description: StrainInfo dataset 73083 about a strain of Pseudoplectania nigrella. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73084.2
title: StrainInfo SI-ID 73084.2

description: StrainInfo dataset 73084 about a strain of Botrytis squamosa. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73085.2
title: StrainInfo SI-ID 73085.2

description: StrainInfo dataset 73085 about a strain of Botrytis aclada. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73086.2
title: StrainInfo SI-ID 73086.2

description: StrainInfo dataset 73086 about a strain of Botrytis cinerea. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73087.2
title: StrainInfo SI-ID 73087.2

description: StrainInfo dataset 73087 about a strain of Botrytis byssoidea. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73088.2
title: StrainInfo SI-ID 73088.2

description: StrainInfo dataset 73088 about a strain of Botrytis aclada. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73089.2
title: StrainInfo SI-ID 73089.2

description: StrainInfo dataset 73089 about a strain of Scedosporium boydii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73090.2
title: StrainInfo SI-ID 73090.2

description: StrainInfo dataset 73090 about a strain of Ramichloridium epichloes. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73091.2
title: StrainInfo SI-ID 73091.2

description: StrainInfo dataset 73091 about a strain of Ramichloridium epichloes. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73092.2
title: StrainInfo SI-ID 73092.2

description: StrainInfo dataset 73092 about a strain of Ramichloridium epichloes. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73093.2
title: StrainInfo SI-ID 73093.2

description: StrainInfo dataset 73093 about a strain of Ramichloridium epichloes. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73094.2
title: StrainInfo SI-ID 73094.2

description: StrainInfo dataset 73094 about a strain of Pseudowardomyces humicola. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73095.2
title: StrainInfo SI-ID 73095.2

description: StrainInfo dataset 73095 about a strain of Fusarium avenaceum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73096.2
title: StrainInfo SI-ID 73096.2

description: StrainInfo dataset 73096 about a strain of Sistotrema brinkmannii. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73097.2
title: StrainInfo SI-ID 73097.2

description: StrainInfo dataset 73097 about a strain of Orbilia oligospora. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73098.2
title: StrainInfo SI-ID 73098.2

description: StrainInfo dataset 73098 about a strain of Botrytis cinerea. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73099.2
title: StrainInfo SI-ID 73099.2

description: StrainInfo dataset 73099 about a strain of Hansfordia pulvinata. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73100.2
title: StrainInfo SI-ID 73100.2

description: StrainInfo dataset 73100 about a strain of Botrytis cinerea. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73101.2
title: StrainInfo SI-ID 73101.2

description: StrainInfo dataset 73101 about a strain of Botrytis cinerea. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73103.2
title: StrainInfo SI-ID 73103.2

description: StrainInfo dataset 73103 about a strain of Alternaria chartarum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73104.2
title: StrainInfo SI-ID 73104.2

description: StrainInfo dataset 73104 about a strain of Verticillium dahliae. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.15468/dl.ap6kum
title: Occurrence Download

description: A dataset containing 4823 species occurrences available in GBIF matching the query:
{
 "and" : [
 "Country is one of (New Zealand)",
 "TaxonKey is one of (Megadyptes antipodes (Hombron & Jacquinot, 1841))",
 "BasisOfRecord is one of (Human Observation, Observation)",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "Year is greater than or equal to 1950",
 "OccurrenceStatus is Present",
 "DistanceFromCentroidInMeters is greater than or equal to 2000"
 ]
}

 The dataset includes 4823 records from 10 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0004012-250227182430271/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id73105.2
title: StrainInfo SI-ID 73105.2

description: StrainInfo dataset 73105 about a strain of Trichophaea abundans. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73106.2
title: StrainInfo SI-ID 73106.2

description: StrainInfo dataset 73106 about a strain of Botrytis cinerea. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73107.2
title: StrainInfo SI-ID 73107.2

description: StrainInfo dataset 73107 about a strain of Syncephalastrum racemosum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73108.2
title: StrainInfo SI-ID 73108.2

description: StrainInfo dataset 73108 about a strain of Botrytis galanthina. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.5066/p99rfm1x
title: 2015 National Coastal Conditions Assessment: Algal Toxins and Cyanotoxins in United States Great Lakes Samples Detected by Liquid Chromatography Triple Quadrupole Mass Spectrometry (LC/MS/MS)

description: The EPA National Coastal Condition Assessment (NCCA) is a nation-wide survey of coastal and estuarine water quality. During the 2015 EPA NCCA, samples were collected for analysis of algal toxins and cyanotoxins at the Organic Geochemistry Research Laboratory (OGRL) at the U.S. Geological Survey Kansas Water Science Center (KSWSC) by liquid chromatography triple quadrupole mass spectrometry (LC/MS/MS). The 542 samples collected from the Great Lakes were analyzed for anatoxin-a, cylindrospermopsin, domoic acid, 10 microcystin congeners, nodularin, and okadaic acid. A subset of samples were also analyzed for dinophysistoxin-1, dinophysistoxin-2, gymnodimine, pectenotoxin-2, and 13-desmethyl spirolide c.
DOI: 10.60712/si-id73109.2
title: StrainInfo SI-ID 73109.2

description: StrainInfo dataset 73109 about a strain of Syncephalastrum racemosum. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73110.2
title: StrainInfo SI-ID 73110.2

description: StrainInfo dataset 73110 about a strain of Alternaria consortialis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73111.3
title: StrainInfo SI-ID 73111.3

description: StrainInfo dataset 73111 about a strain of Botrytis porri. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73112.2
title: StrainInfo SI-ID 73112.2

description: StrainInfo dataset 73112 about a strain of Botrytis cinerea. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73113.2
title: StrainInfo SI-ID 73113.2

description: StrainInfo dataset 73113 about a strain of Botrytis porri. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73114.2
title: StrainInfo SI-ID 73114.2

description: StrainInfo dataset 73114 about a strain of Botryotinia narcissicola. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73115.2
title: StrainInfo SI-ID 73115.2

description: StrainInfo dataset 73115 about a strain of Botryotinia sphaerosperma. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.15468/dl.fp9uqe
title: Occurrence Download

description: A dataset containing 370 species occurrences available in GBIF matching the query:
{
 "and" : [
 "BasisOfRecord is Human Observation",
 "Continent is Asia",
 "Country is India",
 "Geometry POLYGON((73.7414 28.34913,89.28428 30.83913,91 37,77 37,73.7414 28.34913))",
 "HasCoordinate is true",
 "HasGeospatialIssue is false",
 "TaxonKey is Macaca mulatta (Zimmermann, 1780)"
 ]
}

 The dataset includes 370 records from 4 constituent datasets; see https://api.gbif.org/v1/occurrence/download/0003960-250227182400228/datasets/export for details.
 
Data from some individual datasets included in this download may be licensed under less restrictive terms.
DOI: 10.60712/si-id73116.2
title: StrainInfo SI-ID 73116.2

description: StrainInfo dataset 73116 about a strain of Botryotinia polyblastis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73117.2
title: StrainInfo SI-ID 73117.2

description: StrainInfo dataset 73117 about a strain of Botrytis. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73118.2
title: StrainInfo SI-ID 73118.2

description: StrainInfo dataset 73118 about a strain of Botrytis hyacinthi. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.60712/si-id73119.2
title: StrainInfo SI-ID 73119.2

description: StrainInfo dataset 73119 about a strain of Sclerotium. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.
DOI: 10.6084/m9.figshare.26539765
title: Characterization of a novel cellobiose phosphorylase with broad optimal pH range from a tailings pond macrogenomic library

description: Glucose-1-phosphate, a crucial pharmaceutical intermediate, can be generated through the synergistic transformation of lignocellulose using cellulase and cellobiose phosphorylase (CBP), thus holding promise for a profitable biorefinery process. However, the reported optimal pH range of CBPs (6.0–7.5) does not align with that of cellulase (4.8), resulting in suboptimal efficiency in the one-pot conversion of cellulose to glucose-1-phosphate. In this study, we identified a novel cellobiose phosphorylase, CBP1942, comprising 811 amino acid residues (92.5 kDa), in tailing pond macrogenomes, exhibiting identity of 60% to 75% with reported CBPs. CBP1942 was efficiently expressed in <i>E. coli</i> BL21 and purified with His tagging. It maintains over 90% enzyme activity across pH 4–9. Compared to the benchmark CtCBP (GenBank ID: AAL67138.1), CBP1942 displays a 1.2-fold increase in specific enzyme activity at the optimal cellulase temperature (50 °C), indicating its superior suitability for cellulase compounding. CBP1942 exhibits <i>K</i>m and <i>k</i>cat values of 6.69 mM and 8.83 s<sup>−1</sup>, respectively, with a <i>k</i>cat/<i>K</i>m ratio 6.6 times higher than CtCBP, suggesting superior catalytic efficiency. Notably, CBP1942 shows remarkable thermal stability, retaining 94.67% enzyme activity after 3 h at 50 °C, while CtCBP retains only 78.33%. Additionally, CBP1942 complexed with cellulase enhances the conversion of corn stover, resulting in a 6.2-fold increase in glucose-1-phosphate yield compared to CtCBP. These findings indicate CBP1942’s potential as an industrial enzyme for corn stover conversion to glucose-1-phosphate.
DOI: 10.6084/m9.figshare.26539765.v1
title: Characterization of a novel cellobiose phosphorylase with broad optimal pH range from a tailings pond macrogenomic library

description: Glucose-1-phosphate, a crucial pharmaceutical intermediate, can be generated through the synergistic transformation of lignocellulose using cellulase and cellobiose phosphorylase (CBP), thus holding promise for a profitable biorefinery process. However, the reported optimal pH range of CBPs (6.0–7.5) does not align with that of cellulase (4.8), resulting in suboptimal efficiency in the one-pot conversion of cellulose to glucose-1-phosphate. In this study, we identified a novel cellobiose phosphorylase, CBP1942, comprising 811 amino acid residues (92.5 kDa), in tailing pond macrogenomes, exhibiting identity of 60% to 75% with reported CBPs. CBP1942 was efficiently expressed in <i>E. coli</i> BL21 and purified with His tagging. It maintains over 90% enzyme activity across pH 4–9. Compared to the benchmark CtCBP (GenBank ID: AAL67138.1), CBP1942 displays a 1.2-fold increase in specific enzyme activity at the optimal cellulase temperature (50 °C), indicating its superior suitability for cellulase compounding. CBP1942 exhibits <i>K</i>m and <i>k</i>cat values of 6.69 mM and 8.83 s<sup>−1</sup>, respectively, with a <i>k</i>cat/<i>K</i>m ratio 6.6 times higher than CtCBP, suggesting superior catalytic efficiency. Notably, CBP1942 shows remarkable thermal stability, retaining 94.67% enzyme activity after 3 h at 50 °C, while CtCBP retains only 78.33%. Additionally, CBP1942 complexed with cellulase enhances the conversion of corn stover, resulting in a 6.2-fold increase in glucose-1-phosphate yield compared to CtCBP. These findings indicate CBP1942’s potential as an industrial enzyme for corn stover conversion to glucose-1-phosphate.
DOI: 10.6084/m9.figshare.27309036.v1
title: Cloning and characterization of a novel recombinant multifunctional glycoside hydrolase β-D-xylosidase/α-L-arabinopyranosidase/β-glucosidase from <i>Bifidobacterium adolescentis</i> and its application on the biotransformation of ginsenoside Rb3

description: β-D-xylosidase, an important glycoside hydrolase, hydrolyzes xylo-oligosaccharides to yield xylose and biotransforms specific saponins by cleaving β-xylose at the non-reducing end. It is extensively employed in renewable resources, including fuels, food, and pharmaceuticals, as a xylanolytic enzyme. In this study, a 1197 bp β-xylosidase gene (BaXyl5B) derived from <i>Bifidobacterium adolescentis</i> was cloned and expressed in <i>E. coli</i> BL21. Following purification, the recombinant β-xylosidase exhibited a distinct band on SDS-PAGE; its molecular weight was determined to be 46.4 kDa. The optimal activity of BaXyl5B was observed at a pH of 6.0 and a temperature of 30 °C. Purified BaXyl5B demonstrated multifunctional activities involving <i>p</i>-nitrophenyl-β-D-xylopyranoside (<i>p</i>NPβXyl), <i>p</i>-nitrophenyl-α-L-arabinopyranoside (<i>p</i>NPαArap), and <i>p</i>-nitrophenyl-β-D-glucopyranoside (<i>p</i>NPβGlc). A significant finding of this study was that BaXyl5B exhibited high selectivity towards ginsenoside Rb3, which could hydrolyze xylose at the C-20 position of Rb3 to yield Rd and F2. Overall, this research explored a novel β-xylosidase, BaXyl5B, that could serve as a valuable biocatalyst for converting ginsenosides and synthesizing active glycosides and aglycones, making it a promising enzyme for further exploration and utilization.
DOI: 10.60712/si-id73120.2
title: StrainInfo SI-ID 73120.2

description: StrainInfo dataset 73120 about a strain of Botrytis aclada. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data.