cometadata/datacite-titles-descriptions-related-identifiers huggingface dataset:
DOI: 10.6084/m9.figshare.16571103.v4
title: FABIO-CHN PSUTs and MRIO tables for the year 2012

description: This dataset records the physical supply and use tables (PSUTs) and multi-regional input-output (MRIO) tables of 85 agricultural and food products of China. All the tables are constructed based on the statistical data in 2012. <br>For detailed methodological processes to create the PSUTs and MRIO tables, please refer to the article, <i>Ye, Q., Bruckner, M., Wang, R., Schyns, J. F., Zhuo, L. Yang, L., Su, H., and Krol, M. S. A hybrid multi-regional input-output model of China: integrating the physical agricultural biomass and food system into the monetary supply chain. Resources, Conservation & Recycling 177.</i><br>Time-series FABIO-CHN database between 1990-2013 is available upon reasonable request.<br>
DOI: 10.6084/m9.figshare.20407551
title: SI Table 2 from The ecological importance of the accuracy of environmental temperature measurements

description: SI Table 2. Temperature data retrieved from Gemini TinyTag® loggers (n = 4), Pendant HOBO® loggers (n = 5) and Thermochron iButton® loggers (n= 10). Also shown is the difference between the mean logger temperature versus at each water bath temperature (XT) and the std. deviation of the ten temperature readings from each logger.
DOI: 10.6084/m9.figshare.20407551.v1
title: SI Table 2 from The ecological importance of the accuracy of environmental temperature measurements

description: SI Table 2. Temperature data retrieved from Gemini TinyTag® loggers (n = 4), Pendant HOBO® loggers (n = 5) and Thermochron iButton® loggers (n= 10). Also shown is the difference between the mean logger temperature versus at each water bath temperature (XT) and the std. deviation of the ten temperature readings from each logger.
DOI: 10.6084/m9.figshare.20407553
title: Individual chimpanzee data used in analyses.;Raw data for Gamma-GTP analysis.;R script for generating statistical results. from Hepatitis C virus infection reduces the lifespan of chimpanzees used in biomedical research

description: Chimpanzees were used in hepatitis research for over three decades with the aim to identify and develop treatments for the virus, a leading cause of chronic liver disease in humans. We used a dataset of 120 chimpanzees housed at a single institution in Japan, 22 of whom became chronically infected with hepatitis C virus (HCV), to examine whether HCV infection results in a reduced lifespan as reported in humans. Survival analysis showed that HCV carriers experienced a higher mortality risk compared with non-carriers. Although no chimpanzee died from hepatic disease, carriers showed higher γGTP levels compared with non-carriers suggesting that HCV infection negatively affected their liver condition. These results provide evidence that special attention is necessary to monitor the long-term condition of ex-biomedical primates.
DOI: 10.6084/m9.figshare.20407553.v1
title: Individual chimpanzee data used in analyses.;Raw data for Gamma-GTP analysis.;R script for generating statistical results. from Hepatitis C virus infection reduces the lifespan of chimpanzees used in biomedical research

description: Chimpanzees were used in hepatitis research for over three decades with the aim to identify and develop treatments for the virus, a leading cause of chronic liver disease in humans. We used a dataset of 120 chimpanzees housed at a single institution in Japan, 22 of whom became chronically infected with hepatitis C virus (HCV), to examine whether HCV infection results in a reduced lifespan as reported in humans. Survival analysis showed that HCV carriers experienced a higher mortality risk compared with non-carriers. Although no chimpanzee died from hepatic disease, carriers showed higher γGTP levels compared with non-carriers suggesting that HCV infection negatively affected their liver condition. These results provide evidence that special attention is necessary to monitor the long-term condition of ex-biomedical primates.
DOI: 10.6084/m9.figshare.20407556
title: Individual chimpanzee data used in analyses.;Raw data for Gamma-GTP analysis.;R script for generating statistical results. from Hepatitis C virus infection reduces the lifespan of chimpanzees used in biomedical research

description: Chimpanzees were used in hepatitis research for over three decades with the aim to identify and develop treatments for the virus, a leading cause of chronic liver disease in humans. We used a dataset of 120 chimpanzees housed at a single institution in Japan, 22 of whom became chronically infected with hepatitis C virus (HCV), to examine whether HCV infection results in a reduced lifespan as reported in humans. Survival analysis showed that HCV carriers experienced a higher mortality risk compared with non-carriers. Although no chimpanzee died from hepatic disease, carriers showed higher γGTP levels compared with non-carriers suggesting that HCV infection negatively affected their liver condition. These results provide evidence that special attention is necessary to monitor the long-term condition of ex-biomedical primates.
DOI: 10.6084/m9.figshare.20407556.v1
title: Individual chimpanzee data used in analyses.;Raw data for Gamma-GTP analysis.;R script for generating statistical results. from Hepatitis C virus infection reduces the lifespan of chimpanzees used in biomedical research

description: Chimpanzees were used in hepatitis research for over three decades with the aim to identify and develop treatments for the virus, a leading cause of chronic liver disease in humans. We used a dataset of 120 chimpanzees housed at a single institution in Japan, 22 of whom became chronically infected with hepatitis C virus (HCV), to examine whether HCV infection results in a reduced lifespan as reported in humans. Survival analysis showed that HCV carriers experienced a higher mortality risk compared with non-carriers. Although no chimpanzee died from hepatic disease, carriers showed higher γGTP levels compared with non-carriers suggesting that HCV infection negatively affected their liver condition. These results provide evidence that special attention is necessary to monitor the long-term condition of ex-biomedical primates.
DOI: 10.6084/m9.figshare.20407559.v1
title: Individual chimpanzee data used in analyses.;Raw data for Gamma-GTP analysis.;R script for generating statistical results. from Hepatitis C virus infection reduces the lifespan of chimpanzees used in biomedical research

description: Chimpanzees were used in hepatitis research for over three decades with the aim to identify and develop treatments for the virus, a leading cause of chronic liver disease in humans. We used a dataset of 120 chimpanzees housed at a single institution in Japan, 22 of whom became chronically infected with hepatitis C virus (HCV), to examine whether HCV infection results in a reduced lifespan as reported in humans. Survival analysis showed that HCV carriers experienced a higher mortality risk compared with non-carriers. Although no chimpanzee died from hepatic disease, carriers showed higher γGTP levels compared with non-carriers suggesting that HCV infection negatively affected their liver condition. These results provide evidence that special attention is necessary to monitor the long-term condition of ex-biomedical primates.
DOI: 10.6084/m9.figshare.20407559
title: Individual chimpanzee data used in analyses.;Raw data for Gamma-GTP analysis.;R script for generating statistical results. from Hepatitis C virus infection reduces the lifespan of chimpanzees used in biomedical research

description: Chimpanzees were used in hepatitis research for over three decades with the aim to identify and develop treatments for the virus, a leading cause of chronic liver disease in humans. We used a dataset of 120 chimpanzees housed at a single institution in Japan, 22 of whom became chronically infected with hepatitis C virus (HCV), to examine whether HCV infection results in a reduced lifespan as reported in humans. Survival analysis showed that HCV carriers experienced a higher mortality risk compared with non-carriers. Although no chimpanzee died from hepatic disease, carriers showed higher γGTP levels compared with non-carriers suggesting that HCV infection negatively affected their liver condition. These results provide evidence that special attention is necessary to monitor the long-term condition of ex-biomedical primates.
DOI: 10.5281/zenodo.6945173
title: Ethics of Research Funding: pilot study dataset

description: Anonymized data set of the pilot study for the ethics of research funding survey. To anonymize the data, the responses to question C2 (What is the main location of your professional activities) have been removed. The publication of these anonymized data has been approved by the ethics committee of KU Leuven, and was indicated clearly in the informed consent of the survey.
DOI: 10.5281/zenodo.6945172
title: Ethics of Research Funding: pilot study dataset

description: Anonymized data set of the pilot study for the ethics of research funding survey. To anonymize the data, the responses to question C2 (What is the main location of your professional activities) have been removed. The publication of these anonymized data has been approved by the ethics committee of KU Leuven, and was indicated clearly in the informed consent of the survey.
DOI: 10.5281/zenodo.6945199
title: Data, scripts, and figures of the article: Processing weights of chickens determined by Dual-Energy X-Ray Absorptiometry. 3. Validation of prediction models

description: This data set contains the data, JMP scripts, and figures of the article titled "Processing weights of chickens determined by Dual-Energy X-Ray Absorptiometry. 3. Validation of prediction models" to be published in the journal Animal - Open Space.
DOI: 10.5281/zenodo.6615504
title: Data, scripts, and figures of the article: Processing weights of chickens determined by Dual-Energy X-Ray Absorptiometry. 3. Validation of prediction models

description: This data set contains the data, JMP scripts, and figures of the article titled "Processing weights of chickens determined by Dual-Energy X-Ray Absorptiometry. 3. Validation of prediction models" to be published in the journal Animal - Open Space.
DOI: 10.21227/x7pn-8x84
title: A MIMR WPT System with An Output of 3.3 kW - 20 kW

description: Due to the range of battery capacities in different electric vehicles (EVs), wireless power transfer (WPT) systems need to have a large variation in the output power. Since conventional systems are usually designed for a custom specification, the power and efficiency may be significantly reduced due to the need for interoperability between ground assembly and vehicle assembly with different power ratings. To address this issue this paper proposes a DC-link parallel AC-link series (DPAS) multi-inverter multi-rectifier (MIMR) architecture for high-power WPT systems. Modulation, power transfer capability, and power sharing from the design aspects are investigated. A detailed power loss analysis and a simplified maximum efficiency point tracking (MEPT) method based on mutual inductance identification are presented. This vedio demonstrates the results from a 20-kW LCC-LCC WPT system which validates the analysis and proposed system operation.
DOI: 10.6084/m9.figshare.6848759
title: Original data for train and test.xlsx

description: factors influencing hickory yield in Lin'an, China<br>
DOI: 10.6084/m9.figshare.6848759.v2
title: Original data for train and test.xlsx

description: factors influencing hickory yield in Lin'an, China<br>
DOI: 10.6084/m9.figshare.6848759.v1
title: Original data for train and test.xlsx

description: factors influencing hickory yield in Lin'an, China<br>
DOI: 10.34740/kaggle/dsv/4009914
title: AutoXGB
DOI: 10.6084/m9.figshare.20407585.v1
title: egtbib2104.bib from The role of evolutionary game theory in spatial and non-spatial models of the survival of cooperation in cancer: a review

description: Evolutionary game theory (EGT) is a branch of mathematics which considers populations of individuals interacting with each other to receive payoffs. An individual’s payoff is dependent on the strategy of its opponent(s) as well as its own, and the higher its payoff the higher its reproductive fitness. Its offspring generally inherit its interaction strategy, subject to random mutation. Over time the composition of the population shifts as different strategies spread or are driven extinct. In the last 25 years, there has been a flood of interest in applying EGT to cancer modelling, with the aim of explaining how cancerous mutations spread through healthy tissue and how intercellular cooperation persists in tumour-cell populations. This review traces this body of work from theoretical analyses of well-mixed infinite populations through to more realistic spatial models of the development of cooperation between epithelial cells. We also consider work in which EGT has been used to make experimental predictions about the evolution of cancer, and discuss work that remains to be done before EGT can make large-scale contributions to clinical treatment and patient outcomes.
DOI: 10.6084/m9.figshare.20407585
title: egtbib2104.bib from The role of evolutionary game theory in spatial and non-spatial models of the survival of cooperation in cancer: a review

description: Evolutionary game theory (EGT) is a branch of mathematics which considers populations of individuals interacting with each other to receive payoffs. An individual’s payoff is dependent on the strategy of its opponent(s) as well as its own, and the higher its payoff the higher its reproductive fitness. Its offspring generally inherit its interaction strategy, subject to random mutation. Over time the composition of the population shifts as different strategies spread or are driven extinct. In the last 25 years, there has been a flood of interest in applying EGT to cancer modelling, with the aim of explaining how cancerous mutations spread through healthy tissue and how intercellular cooperation persists in tumour-cell populations. This review traces this body of work from theoretical analyses of well-mixed infinite populations through to more realistic spatial models of the development of cooperation between epithelial cells. We also consider work in which EGT has been used to make experimental predictions about the evolution of cancer, and discuss work that remains to be done before EGT can make large-scale contributions to clinical treatment and patient outcomes.
DOI: 10.6084/m9.figshare.14369234
title: Innovation ability evaluation

description: thirty listed companies of China in 2018
DOI: 10.6084/m9.figshare.14369234.v1
title: Innovation ability evaluation

description: thirty listed companies of China in 2018
DOI: 10.6084/m9.figshare.20407600
title: Supplementary Data 3.xlsx from A genetic model for <i>in vivo</i> proximity labelling of the mammalian secretome

description: Organ functions are highly specialized and interdependent. Secreted factors regulate organ development and mediate homeostasis through serum trafficking and inter-organ communication. Enzyme-catalysed proximity labelling enables the identification of proteins within a specific cellular compartment. Here, we report a <i>BirA*G3</i> mouse strain that enables CRE-dependent promiscuous biotinylation of proteins trafficking through the endoplasmic reticulum. When broadly activated throughout the mouse, widespread labelling of proteins was observed within the secretory pathway. Streptavidin affinity purification and peptide mapping by quantitative mass spectrometry (MS) proteomics revealed organ-specific secretory profiles and serum trafficking. As expected, secretory proteomes were highly enriched for signal peptide-containing proteins, highlighting both conventional and non-conventional secretory processes, and ectodomain shedding. Lower-abundance proteins with hormone-like properties were recovered and validated using orthogonal approaches. Hepatocyte-specific activation of BirA*G3 highlighted liver-specific biotinylated secretome profiles. The BirA*G3 mouse model demonstrates enhanced labelling efficiency and tissue specificity over viral transduction approaches and will facilitate a deeper understanding of secretory protein interplay in development, and healthy and diseased adult states.
DOI: 10.6084/m9.figshare.20407600.v1
title: Supplementary Data 3.xlsx from A genetic model for <i>in vivo</i> proximity labelling of the mammalian secretome

description: Organ functions are highly specialized and interdependent. Secreted factors regulate organ development and mediate homeostasis through serum trafficking and inter-organ communication. Enzyme-catalysed proximity labelling enables the identification of proteins within a specific cellular compartment. Here, we report a <i>BirA*G3</i> mouse strain that enables CRE-dependent promiscuous biotinylation of proteins trafficking through the endoplasmic reticulum. When broadly activated throughout the mouse, widespread labelling of proteins was observed within the secretory pathway. Streptavidin affinity purification and peptide mapping by quantitative mass spectrometry (MS) proteomics revealed organ-specific secretory profiles and serum trafficking. As expected, secretory proteomes were highly enriched for signal peptide-containing proteins, highlighting both conventional and non-conventional secretory processes, and ectodomain shedding. Lower-abundance proteins with hormone-like properties were recovered and validated using orthogonal approaches. Hepatocyte-specific activation of BirA*G3 highlighted liver-specific biotinylated secretome profiles. The BirA*G3 mouse model demonstrates enhanced labelling efficiency and tissue specificity over viral transduction approaches and will facilitate a deeper understanding of secretory protein interplay in development, and healthy and diseased adult states.
DOI: 10.6084/m9.figshare.20407603
title: Supplementary Data 1.xlsx from A genetic model for <i>in vivo</i> proximity labelling of the mammalian secretome

description: Organ functions are highly specialized and interdependent. Secreted factors regulate organ development and mediate homeostasis through serum trafficking and inter-organ communication. Enzyme-catalysed proximity labelling enables the identification of proteins within a specific cellular compartment. Here, we report a <i>BirA*G3</i> mouse strain that enables CRE-dependent promiscuous biotinylation of proteins trafficking through the endoplasmic reticulum. When broadly activated throughout the mouse, widespread labelling of proteins was observed within the secretory pathway. Streptavidin affinity purification and peptide mapping by quantitative mass spectrometry (MS) proteomics revealed organ-specific secretory profiles and serum trafficking. As expected, secretory proteomes were highly enriched for signal peptide-containing proteins, highlighting both conventional and non-conventional secretory processes, and ectodomain shedding. Lower-abundance proteins with hormone-like properties were recovered and validated using orthogonal approaches. Hepatocyte-specific activation of BirA*G3 highlighted liver-specific biotinylated secretome profiles. The BirA*G3 mouse model demonstrates enhanced labelling efficiency and tissue specificity over viral transduction approaches and will facilitate a deeper understanding of secretory protein interplay in development, and healthy and diseased adult states.
DOI: 10.6084/m9.figshare.20407603.v1
title: Supplementary Data 1.xlsx from A genetic model for <i>in vivo</i> proximity labelling of the mammalian secretome

description: Organ functions are highly specialized and interdependent. Secreted factors regulate organ development and mediate homeostasis through serum trafficking and inter-organ communication. Enzyme-catalysed proximity labelling enables the identification of proteins within a specific cellular compartment. Here, we report a <i>BirA*G3</i> mouse strain that enables CRE-dependent promiscuous biotinylation of proteins trafficking through the endoplasmic reticulum. When broadly activated throughout the mouse, widespread labelling of proteins was observed within the secretory pathway. Streptavidin affinity purification and peptide mapping by quantitative mass spectrometry (MS) proteomics revealed organ-specific secretory profiles and serum trafficking. As expected, secretory proteomes were highly enriched for signal peptide-containing proteins, highlighting both conventional and non-conventional secretory processes, and ectodomain shedding. Lower-abundance proteins with hormone-like properties were recovered and validated using orthogonal approaches. Hepatocyte-specific activation of BirA*G3 highlighted liver-specific biotinylated secretome profiles. The BirA*G3 mouse model demonstrates enhanced labelling efficiency and tissue specificity over viral transduction approaches and will facilitate a deeper understanding of secretory protein interplay in development, and healthy and diseased adult states.
DOI: 10.6084/m9.figshare.20407606
title: Supplementary Data 5.xlsx from A genetic model for <i>in vivo</i> proximity labelling of the mammalian secretome

description: Organ functions are highly specialized and interdependent. Secreted factors regulate organ development and mediate homeostasis through serum trafficking and inter-organ communication. Enzyme-catalysed proximity labelling enables the identification of proteins within a specific cellular compartment. Here, we report a <i>BirA*G3</i> mouse strain that enables CRE-dependent promiscuous biotinylation of proteins trafficking through the endoplasmic reticulum. When broadly activated throughout the mouse, widespread labelling of proteins was observed within the secretory pathway. Streptavidin affinity purification and peptide mapping by quantitative mass spectrometry (MS) proteomics revealed organ-specific secretory profiles and serum trafficking. As expected, secretory proteomes were highly enriched for signal peptide-containing proteins, highlighting both conventional and non-conventional secretory processes, and ectodomain shedding. Lower-abundance proteins with hormone-like properties were recovered and validated using orthogonal approaches. Hepatocyte-specific activation of BirA*G3 highlighted liver-specific biotinylated secretome profiles. The BirA*G3 mouse model demonstrates enhanced labelling efficiency and tissue specificity over viral transduction approaches and will facilitate a deeper understanding of secretory protein interplay in development, and healthy and diseased adult states.
DOI: 10.6084/m9.figshare.20407606.v1
title: Supplementary Data 5.xlsx from A genetic model for <i>in vivo</i> proximity labelling of the mammalian secretome

description: Organ functions are highly specialized and interdependent. Secreted factors regulate organ development and mediate homeostasis through serum trafficking and inter-organ communication. Enzyme-catalysed proximity labelling enables the identification of proteins within a specific cellular compartment. Here, we report a <i>BirA*G3</i> mouse strain that enables CRE-dependent promiscuous biotinylation of proteins trafficking through the endoplasmic reticulum. When broadly activated throughout the mouse, widespread labelling of proteins was observed within the secretory pathway. Streptavidin affinity purification and peptide mapping by quantitative mass spectrometry (MS) proteomics revealed organ-specific secretory profiles and serum trafficking. As expected, secretory proteomes were highly enriched for signal peptide-containing proteins, highlighting both conventional and non-conventional secretory processes, and ectodomain shedding. Lower-abundance proteins with hormone-like properties were recovered and validated using orthogonal approaches. Hepatocyte-specific activation of BirA*G3 highlighted liver-specific biotinylated secretome profiles. The BirA*G3 mouse model demonstrates enhanced labelling efficiency and tissue specificity over viral transduction approaches and will facilitate a deeper understanding of secretory protein interplay in development, and healthy and diseased adult states.